Query 045553
Match_columns 1082
No_of_seqs 1037 out of 7315
Neff 9.2
Searched_HMMs 29240
Date Mon Mar 25 05:05:55 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/045553.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/045553hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3rgz_A Protein brassinosteroid 100.0 3.8E-73 1.3E-77 715.8 45.2 643 1-697 14-741 (768)
2 3rgz_A Protein brassinosteroid 100.0 9.1E-58 3.1E-62 575.6 33.5 528 94-676 159-740 (768)
3 1ziw_A TOLL-like receptor 3; i 100.0 5.5E-55 1.9E-59 545.4 48.2 547 95-711 34-637 (680)
4 4eco_A Uncharacterized protein 100.0 6.8E-56 2.3E-60 545.7 24.0 497 1-677 32-601 (636)
5 3j0a_A TOLL-like receptor 5; m 100.0 2.8E-53 9.5E-58 540.3 38.2 514 96-709 34-572 (844)
6 4ecn_A Leucine-rich repeat pro 100.0 1.1E-53 3.9E-58 533.1 31.2 513 1-700 271-870 (876)
7 3t6q_A CD180 antigen; protein- 100.0 1.6E-52 5.5E-57 515.9 37.9 485 93-700 40-564 (606)
8 3t6q_A CD180 antigen; protein- 100.0 2.3E-52 8E-57 514.5 38.3 495 102-696 27-536 (606)
9 3vq2_A TLR4, TOLL-like recepto 100.0 1E-52 3.4E-57 517.8 31.9 521 92-711 38-572 (606)
10 1ziw_A TOLL-like receptor 3; i 100.0 5.2E-50 1.8E-54 500.4 43.6 552 96-694 14-595 (680)
11 3j0a_A TOLL-like receptor 5; m 100.0 9.1E-49 3.1E-53 498.7 40.4 521 30-684 14-568 (844)
12 4asz_A BDNF/NT-3 growth factor 100.0 4.5E-50 1.6E-54 441.7 21.8 257 801-1078 13-288 (299)
13 4aoj_A High affinity nerve gro 100.0 1.4E-49 4.8E-54 444.0 25.4 258 801-1079 41-319 (329)
14 4gt4_A Tyrosine-protein kinase 100.0 2.7E-49 9.2E-54 437.5 23.4 257 801-1078 26-305 (308)
15 3omv_A RAF proto-oncogene seri 100.0 4.2E-49 1.4E-53 433.6 23.9 260 801-1080 36-301 (307)
16 3vq2_A TLR4, TOLL-like recepto 100.0 2.9E-48 9.8E-53 478.0 31.1 530 27-682 4-564 (606)
17 2z63_A TOLL-like receptor 4, v 100.0 2.3E-47 7.8E-52 466.6 32.6 494 110-682 28-537 (570)
18 4b9d_A Serine/threonine-protei 100.0 2.9E-48 9.8E-53 432.8 19.9 251 801-1073 24-277 (350)
19 2z81_A CD282 antigen, TOLL-lik 100.0 1.8E-47 6.2E-52 465.2 26.0 152 518-680 361-514 (549)
20 4fih_A Serine/threonine-protei 100.0 2E-47 6.9E-52 425.2 22.9 250 801-1073 74-324 (346)
21 2z63_A TOLL-like receptor 4, v 100.0 2.5E-46 8.7E-51 457.3 31.5 493 112-712 9-547 (570)
22 3hmm_A TGF-beta receptor type- 100.0 6.1E-47 2.1E-51 420.1 22.5 270 801-1080 3-298 (303)
23 4aw0_A HPDK1, 3-phosphoinositi 100.0 3.6E-47 1.2E-51 416.7 20.0 247 801-1071 32-283 (311)
24 4g3f_A NF-kappa-beta-inducing 100.0 5.7E-47 1.9E-51 420.5 21.5 252 800-1077 57-314 (336)
25 4ase_A Vascular endothelial gr 100.0 5.5E-47 1.9E-51 426.3 19.7 264 795-1078 58-346 (353)
26 3fpq_A Serine/threonine-protei 100.0 1.5E-46 5.2E-51 410.3 22.5 246 803-1073 28-283 (290)
27 4fie_A Serine/threonine-protei 100.0 2.5E-46 8.5E-51 426.7 24.6 250 801-1073 151-401 (423)
28 3hyh_A Carbon catabolite-derep 100.0 2.7E-46 9.2E-51 404.6 22.4 246 801-1073 13-263 (275)
29 2z81_A CD282 antigen, TOLL-lik 100.0 2.2E-45 7.4E-50 446.9 28.1 486 101-711 19-525 (549)
30 4eco_A Uncharacterized protein 100.0 1.1E-46 3.8E-51 463.6 16.1 453 110-697 81-601 (636)
31 3ubd_A Ribosomal protein S6 ki 100.0 2.8E-46 9.5E-51 410.1 16.7 247 801-1072 24-281 (304)
32 4g8a_A TOLL-like receptor 4; l 100.0 3.7E-44 1.3E-48 444.2 34.7 520 95-713 61-596 (635)
33 2z7x_B TOLL-like receptor 1, v 100.0 2.1E-45 7.2E-50 443.6 21.8 159 518-680 324-485 (520)
34 2z7x_B TOLL-like receptor 1, v 100.0 2.5E-45 8.5E-50 443.0 22.3 462 113-711 3-496 (520)
35 4g31_A Eukaryotic translation 100.0 3.1E-44 1.1E-48 396.0 20.3 249 801-1072 5-279 (299)
36 4ecn_A Leucine-rich repeat pro 100.0 9.8E-44 3.4E-48 443.6 26.8 451 110-696 323-840 (876)
37 3uim_A Brassinosteroid insensi 100.0 9.3E-43 3.2E-47 393.9 22.5 291 788-1078 17-310 (326)
38 2qkw_B Protein kinase; three-h 100.0 5.3E-42 1.8E-46 386.7 25.5 283 791-1078 29-314 (321)
39 3a79_B TLR6, VLRB.59, TOLL-lik 100.0 1.3E-42 4.3E-47 423.0 21.7 457 112-682 33-516 (562)
40 4b99_A Mitogen-activated prote 100.0 4E-42 1.4E-46 393.8 23.4 260 800-1073 53-345 (398)
41 4f9c_A Cell division cycle 7-r 100.0 8.5E-42 2.9E-46 387.1 24.3 203 793-1005 13-249 (361)
42 3v47_A TOLL-like receptor 5B a 100.0 6.9E-41 2.4E-45 397.1 28.9 140 543-682 275-414 (455)
43 3a79_B TLR6, VLRB.59, TOLL-lik 100.0 2.4E-41 8.2E-46 411.7 25.4 462 134-701 31-515 (562)
44 4g8a_A TOLL-like receptor 4; l 100.0 3.5E-40 1.2E-44 408.4 32.3 493 110-681 52-560 (635)
45 3v5w_A G-protein coupled recep 100.0 7.5E-41 2.6E-45 397.7 23.5 248 801-1072 189-449 (689)
46 3uto_A Twitchin; kinase, muscl 100.0 5.8E-41 2E-45 403.5 22.9 253 800-1073 156-411 (573)
47 1jl5_A Outer protein YOPM; leu 100.0 7.4E-40 2.5E-44 385.2 27.5 249 108-412 9-270 (454)
48 1ogq_A PGIP-2, polygalacturona 100.0 1.2E-40 4.3E-45 373.1 19.4 287 1-387 8-302 (313)
49 3v47_A TOLL-like receptor 5B a 100.0 1.9E-39 6.6E-44 384.7 28.3 365 110-656 30-412 (455)
50 3s95_A LIMK-1, LIM domain kina 100.0 4.8E-40 1.7E-44 368.7 21.9 258 800-1078 9-281 (310)
51 2nru_A Interleukin-1 receptor- 100.0 7.2E-39 2.5E-43 358.7 29.0 284 787-1080 11-307 (307)
52 3sxs_A Cytoplasmic tyrosine-pr 100.0 3.2E-39 1.1E-43 353.9 24.8 259 800-1081 7-266 (268)
53 3fxz_A Serine/threonine-protei 100.0 4.5E-39 1.5E-43 358.1 25.4 251 800-1073 19-270 (297)
54 2psq_A Fibroblast growth facto 100.0 2.5E-39 8.4E-44 371.4 23.7 258 800-1078 80-363 (370)
55 4hcu_A Tyrosine-protein kinase 100.0 2.1E-39 7.3E-44 355.5 22.1 257 801-1080 10-267 (269)
56 3p86_A Serine/threonine-protei 100.0 2.7E-39 9.1E-44 361.8 23.0 260 799-1080 35-299 (309)
57 3kul_A Ephrin type-A receptor 100.0 4.6E-39 1.6E-43 362.8 23.9 258 800-1079 48-313 (325)
58 3zgw_A Maternal embryonic leuc 100.0 2.4E-39 8.1E-44 366.7 20.6 251 799-1073 8-261 (347)
59 2c30_A Serine/threonine-protei 100.0 2.1E-38 7.3E-43 356.7 28.2 262 789-1073 23-295 (321)
60 1jl5_A Outer protein YOPM; leu 100.0 2E-38 6.9E-43 373.0 28.9 400 93-681 18-434 (454)
61 3fe3_A MAP/microtubule affinit 100.0 6.7E-39 2.3E-43 361.0 23.8 248 800-1073 14-265 (328)
62 3gen_A Tyrosine-protein kinase 100.0 5.7E-39 1.9E-43 355.0 21.1 259 800-1081 23-282 (283)
63 3ugc_A Tyrosine-protein kinase 100.0 4.4E-39 1.5E-43 358.1 20.3 268 800-1080 9-292 (295)
64 3soc_A Activin receptor type-2 100.0 8.6E-39 2.9E-43 360.3 22.7 271 800-1079 23-318 (322)
65 3q4u_A Activin receptor type-1 100.0 2.4E-38 8.2E-43 353.3 26.0 262 800-1078 7-301 (301)
66 1opk_A P150, C-ABL, proto-onco 100.0 5.4E-39 1.8E-43 382.8 21.3 259 800-1080 219-479 (495)
67 4eqm_A Protein kinase; transfe 100.0 8.9E-39 3E-43 355.2 21.6 262 800-1080 10-276 (294)
68 2qol_A Ephrin receptor; recept 100.0 2.7E-39 9.1E-44 371.4 17.7 256 801-1078 45-308 (373)
69 1qcf_A Haematopoetic cell kina 100.0 6.2E-39 2.1E-43 378.7 21.3 257 800-1079 187-444 (454)
70 3cbl_A C-FES, proto-oncogene t 100.0 2.4E-39 8.2E-44 372.9 16.5 258 800-1079 113-374 (377)
71 3t9t_A Tyrosine-protein kinase 100.0 2.5E-38 8.6E-43 346.6 21.4 257 801-1080 8-265 (267)
72 1k9a_A Carboxyl-terminal SRC k 100.0 3.1E-38 1E-42 372.1 23.5 252 800-1079 192-445 (450)
73 3bz5_A Internalin-J, INLJ; leu 100.0 1.1E-37 3.6E-42 367.2 27.5 238 97-411 29-266 (457)
74 1o6l_A RAC-beta serine/threoni 100.0 4.6E-38 1.6E-42 355.1 23.3 248 801-1073 5-261 (337)
75 1luf_A Muscle-specific tyrosin 100.0 4E-38 1.4E-42 358.6 22.8 262 799-1081 45-337 (343)
76 1fmk_A C-SRC, P60-SRC, tyrosin 100.0 2.3E-38 7.9E-43 373.4 21.4 257 800-1079 183-440 (452)
77 3kfa_A Tyrosine-protein kinase 100.0 8.8E-39 3E-43 354.4 16.8 258 799-1078 11-270 (288)
78 3tt0_A Basic fibroblast growth 100.0 7.2E-38 2.5E-42 361.4 25.1 258 800-1078 68-351 (382)
79 2yab_A Death-associated protei 100.0 6.6E-38 2.2E-42 357.1 24.3 252 799-1072 10-272 (361)
80 3vhe_A Vascular endothelial gr 100.0 1.6E-38 5.6E-43 364.2 19.3 269 791-1079 12-355 (359)
81 1mp8_A Focal adhesion kinase 1 100.0 2.4E-38 8.1E-43 349.6 19.3 256 800-1078 14-275 (281)
82 3kmu_A ILK, integrin-linked ki 100.0 7.5E-38 2.6E-42 343.5 22.8 253 800-1079 9-270 (271)
83 2ivs_A Proto-oncogene tyrosine 100.0 4.2E-38 1.4E-42 353.6 21.3 259 800-1079 22-311 (314)
84 3dtc_A Mitogen-activated prote 100.0 7.8E-38 2.7E-42 343.5 22.7 254 800-1077 6-271 (271)
85 3lb7_A RAF proto-oncogene seri 100.0 9.3E-38 3.2E-42 349.1 23.7 261 800-1080 35-301 (307)
86 3niz_A Rhodanese family protei 100.0 1.1E-37 3.8E-42 349.2 24.1 263 800-1073 20-301 (311)
87 3poz_A Epidermal growth factor 100.0 3.1E-38 1.1E-42 356.5 19.7 256 800-1078 14-277 (327)
88 1qpc_A LCK kinase; alpha beta 100.0 8.7E-38 3E-42 344.7 22.7 256 800-1078 12-268 (279)
89 3l9p_A Anaplastic lymphoma kin 100.0 3.7E-38 1.3E-42 361.5 20.2 258 800-1078 70-344 (367)
90 4dc2_A Protein kinase C IOTA t 100.0 5.8E-38 2E-42 360.6 21.8 252 800-1067 51-307 (396)
91 4euu_A Serine/threonine-protei 100.0 2.8E-37 9.7E-42 347.6 27.1 270 800-1078 8-308 (319)
92 1tki_A Titin; serine kinase, m 100.0 5.8E-38 2E-42 352.8 21.3 252 800-1073 4-258 (321)
93 1kob_A Twitchin; kinase, intra 100.0 1.7E-37 5.9E-42 356.8 24.6 253 800-1073 50-305 (387)
94 1csn_A Casein kinase-1; phosph 100.0 2.5E-37 8.7E-42 344.5 25.0 261 800-1078 9-282 (298)
95 4aw2_A Serine/threonine-protei 100.0 3.3E-38 1.1E-42 367.6 18.4 264 792-1073 65-339 (437)
96 2y0a_A Death-associated protei 100.0 1.5E-37 5.2E-42 350.5 23.2 252 800-1073 10-272 (326)
97 2izr_A Casein kinase I isoform 100.0 1.6E-37 5.6E-42 351.3 23.5 260 800-1078 8-280 (330)
98 1fot_A TPK1 delta, CAMP-depend 100.0 2.6E-37 8.8E-42 346.5 24.7 245 801-1073 6-259 (318)
99 3tki_A Serine/threonine-protei 100.0 5E-38 1.7E-42 353.8 19.0 253 800-1073 6-262 (323)
100 3v8s_A RHO-associated protein 100.0 2.2E-38 7.6E-43 366.2 16.4 260 793-1073 61-330 (410)
101 3txo_A PKC-L, NPKC-ETA, protei 100.0 5.3E-38 1.8E-42 357.0 19.0 248 800-1072 22-280 (353)
102 1rjb_A FL cytokine receptor; k 100.0 1.7E-37 5.9E-42 353.5 23.3 262 799-1080 43-335 (344)
103 1t46_A HOMO sapiens V-KIT hard 100.0 2.3E-37 7.9E-42 347.4 23.4 259 800-1078 22-306 (313)
104 4f0f_A Serine/threonine-protei 100.0 4.1E-37 1.4E-41 340.8 25.0 253 800-1077 18-287 (287)
105 4e5w_A Tyrosine-protein kinase 100.0 1.8E-37 6.1E-42 346.5 22.2 264 801-1078 21-301 (302)
106 3a8x_A Protein kinase C IOTA t 100.0 1.9E-37 6.6E-42 351.7 22.7 251 801-1067 9-264 (345)
107 2bdw_A Hypothetical protein K1 100.0 1.3E-37 4.5E-42 355.7 21.5 253 799-1073 27-285 (362)
108 3soa_A Calcium/calmodulin-depe 100.0 3.2E-37 1.1E-41 360.7 25.1 254 799-1073 9-268 (444)
109 3h4j_B AMPK kdaid, SNF1-like p 100.0 1.1E-37 3.7E-42 351.7 20.4 247 800-1073 8-259 (336)
110 1ob3_A PFPK5, cell division co 100.0 2.2E-37 7.7E-42 343.0 22.5 262 801-1073 2-281 (288)
111 2pvf_A Fibroblast growth facto 100.0 3.7E-37 1.3E-41 349.1 24.5 258 800-1078 34-317 (334)
112 3lxl_A Tyrosine-protein kinase 100.0 1.7E-38 6E-43 358.9 13.4 267 800-1079 22-303 (327)
113 3op5_A Serine/threonine-protei 100.0 1.1E-37 3.8E-42 357.6 20.1 267 799-1078 33-328 (364)
114 3qup_A Tyrosine-protein kinase 100.0 4.2E-38 1.4E-42 355.2 16.4 260 798-1078 20-297 (323)
115 3cc6_A Protein tyrosine kinase 100.0 1.2E-37 4E-42 344.1 19.5 256 800-1078 11-272 (281)
116 4fvq_A Tyrosine-protein kinase 100.0 1.7E-37 5.8E-42 344.3 20.5 254 800-1081 7-277 (289)
117 2h8h_A Proto-oncogene tyrosine 100.0 8E-38 2.7E-42 376.1 19.3 257 800-1079 266-523 (535)
118 1rdq_E PKA C-alpha, CAMP-depen 100.0 4E-37 1.4E-41 349.6 23.8 245 801-1073 41-294 (350)
119 2zv2_A Calcium/calmodulin-depe 100.0 3E-37 1E-41 343.9 22.2 250 800-1073 12-293 (298)
120 3lxp_A Non-receptor tyrosine-p 100.0 6.3E-38 2.2E-42 352.7 16.6 261 803-1078 33-309 (318)
121 3og7_A AKAP9-BRAF fusion prote 100.0 2.8E-37 9.4E-42 342.5 21.5 260 800-1079 23-288 (289)
122 1xjd_A Protein kinase C, theta 100.0 1.2E-37 4E-42 352.7 18.8 248 799-1071 15-268 (345)
123 2vd5_A DMPK protein; serine/th 100.0 7.7E-38 2.6E-42 361.9 17.6 264 791-1073 51-328 (412)
124 3kex_A Receptor tyrosine-prote 100.0 6.2E-38 2.1E-42 353.9 16.4 256 801-1079 13-276 (325)
125 1u59_A Tyrosine-protein kinase 100.0 2.9E-37 9.9E-42 342.0 21.3 255 801-1078 9-271 (287)
126 2x4f_A Myosin light chain kina 100.0 3.3E-37 1.1E-41 353.7 22.4 246 806-1072 94-342 (373)
127 2buj_A Serine/threonine-protei 100.0 1.9E-37 6.4E-42 348.9 20.0 263 800-1081 28-308 (317)
128 4fr4_A YANK1, serine/threonine 100.0 4.2E-37 1.4E-41 352.3 23.2 249 801-1072 15-271 (384)
129 3c0i_A Peripheral plasma membr 100.0 3.8E-37 1.3E-41 350.9 22.2 254 800-1073 23-287 (351)
130 1p4o_A Insulin-like growth fac 100.0 1.9E-37 6.5E-42 349.7 19.5 265 795-1080 19-300 (322)
131 3o0g_A Cell division protein k 100.0 6.5E-37 2.2E-41 340.1 23.5 260 801-1073 2-283 (292)
132 3a62_A Ribosomal protein S6 ki 100.0 5.2E-37 1.8E-41 346.3 22.9 249 800-1073 16-277 (327)
133 2i0e_A Protein kinase C-beta I 100.0 5.5E-37 1.9E-41 348.4 23.2 250 799-1073 18-277 (353)
134 2h34_A Serine/threonine-protei 100.0 8.6E-37 2.9E-41 341.9 24.4 260 800-1080 33-297 (309)
135 1mqb_A Ephrin type-A receptor 100.0 9.2E-37 3.2E-41 345.3 24.9 256 801-1078 44-308 (333)
136 3mdy_A Bone morphogenetic prot 100.0 1.9E-36 6.4E-41 343.9 27.4 269 798-1080 34-332 (337)
137 3qd2_B Eukaryotic translation 100.0 5.8E-37 2E-41 347.2 23.0 252 799-1073 4-326 (332)
138 3gni_B Strad alpha; kinase fol 100.0 5.3E-37 1.8E-41 355.5 23.1 268 799-1073 23-334 (389)
139 2eva_A TAK1 kinase - TAB1 chim 100.0 6E-37 2E-41 342.7 22.8 254 801-1079 8-263 (307)
140 1b6c_B TGF-B superfamily recep 100.0 1.6E-36 5.4E-41 345.2 26.3 267 797-1080 38-337 (342)
141 2pmi_A Negative RE, cyclin-dep 100.0 4.1E-37 1.4E-41 345.8 20.8 264 800-1073 4-294 (317)
142 3ork_A Serine/threonine protei 100.0 1.5E-37 5.1E-42 348.5 17.2 257 800-1076 11-278 (311)
143 2w1i_A JAK2; chromosomal rearr 100.0 4.3E-37 1.5E-41 347.2 20.9 267 800-1079 40-322 (326)
144 3dbq_A Dual specificity protei 100.0 1.7E-37 5.7E-42 353.1 17.5 251 800-1073 8-274 (343)
145 2w4o_A Calcium/calmodulin-depe 100.0 6.9E-37 2.3E-41 348.3 22.6 252 799-1073 51-306 (349)
146 3p1a_A MYT1 kinase, membrane-a 100.0 3.5E-37 1.2E-41 345.3 19.7 245 801-1073 57-305 (311)
147 3uc3_A Serine/threonine-protei 100.0 8.8E-37 3E-41 349.0 23.0 253 800-1073 19-275 (361)
148 1byg_A CSK, protein (C-termina 100.0 1.6E-37 5.6E-42 342.3 16.3 252 800-1079 20-273 (278)
149 3lzb_A Epidermal growth factor 100.0 3.1E-37 1.1E-41 348.1 18.8 257 800-1079 14-278 (327)
150 1o6v_A Internalin A; bacterial 100.0 1.2E-35 4E-40 352.6 33.3 245 96-389 34-278 (466)
151 3uzp_A CKI-delta, CKID, casein 100.0 2.5E-36 8.4E-41 336.1 25.8 262 799-1078 7-279 (296)
152 2v62_A Serine/threonine-protei 100.0 6.3E-37 2.2E-41 348.6 21.4 267 800-1080 36-329 (345)
153 2xir_A Vascular endothelial gr 100.0 4.9E-37 1.7E-41 345.3 20.2 269 791-1079 17-310 (316)
154 3f3z_A Calcium/calmodulin-depe 100.0 2.1E-36 7.1E-41 333.3 24.8 251 799-1072 7-261 (277)
155 4hgt_A Casein kinase I isoform 100.0 1.7E-36 5.9E-41 337.4 24.3 262 799-1078 7-279 (296)
156 3hko_A Calcium/calmodulin-depe 100.0 4.8E-37 1.6E-41 350.0 20.2 261 795-1073 20-331 (345)
157 2a19_B Interferon-induced, dou 100.0 2.8E-37 9.4E-42 341.6 17.6 250 799-1080 9-275 (284)
158 3c1x_A Hepatocyte growth facto 100.0 2.9E-37 9.9E-42 354.0 18.3 256 802-1079 90-355 (373)
159 2y94_A 5'-AMP-activated protei 100.0 1.1E-36 3.6E-41 358.5 23.5 248 800-1073 15-267 (476)
160 3f66_A Hepatocyte growth facto 100.0 7.3E-37 2.5E-41 340.8 20.8 259 800-1079 24-291 (298)
161 4eut_A Serine/threonine-protei 100.0 1.3E-36 4.4E-41 352.6 23.5 270 800-1079 8-309 (396)
162 1xbb_A Tyrosine-protein kinase 100.0 1.1E-36 3.7E-41 338.2 21.8 254 800-1077 15-277 (291)
163 2ozo_A Tyrosine-protein kinase 100.0 5.2E-37 1.8E-41 374.2 21.1 253 802-1077 336-596 (613)
164 3kk8_A Calcium/calmodulin depe 100.0 2.3E-36 7.9E-41 334.2 24.1 253 799-1073 4-262 (284)
165 2acx_A G protein-coupled recep 100.0 1.2E-36 4E-41 362.3 23.2 254 800-1073 183-445 (576)
166 1u5q_A Serine/threonine protei 100.0 8.7E-37 3E-41 347.0 21.1 247 801-1074 54-307 (348)
167 2a2a_A Death-associated protei 100.0 1.5E-36 5.3E-41 341.9 22.9 252 800-1073 11-273 (321)
168 2i1m_A Macrophage colony-stimu 100.0 4.1E-37 1.4E-41 348.7 18.3 260 799-1078 44-325 (333)
169 2eue_A Carbon catabolite derep 100.0 7.8E-37 2.7E-41 336.3 20.0 246 801-1073 13-263 (275)
170 2wqm_A Serine/threonine-protei 100.0 2.7E-36 9.2E-41 338.2 24.7 261 800-1079 31-297 (310)
171 3g2f_A Bone morphogenetic prot 100.0 2.9E-36 9.9E-41 342.2 25.0 271 800-1080 12-319 (336)
172 3llt_A Serine/threonine kinase 100.0 9.7E-37 3.3E-41 349.6 21.2 208 789-1005 23-261 (360)
173 3g33_A Cell division protein k 100.0 1.8E-36 6E-41 339.4 22.7 264 799-1073 7-297 (308)
174 3fdn_A Serine/threonine-protei 100.0 1.3E-36 4.4E-41 335.3 21.3 248 799-1073 7-258 (279)
175 3gxj_A TGF-beta receptor type- 100.0 1.9E-38 6.4E-43 354.5 6.5 265 800-1081 2-299 (303)
176 3pls_A Macrophage-stimulating 100.0 1.3E-36 4.4E-41 338.8 21.3 256 802-1078 22-286 (298)
177 4ejn_A RAC-alpha serine/threon 100.0 4.7E-37 1.6E-41 362.1 18.6 249 800-1073 147-405 (446)
178 2zmd_A Dual specificity protei 100.0 4.8E-37 1.7E-41 354.8 18.1 250 801-1073 56-321 (390)
179 3is5_A Calcium-dependent prote 100.0 2.2E-36 7.4E-41 334.5 22.5 252 800-1073 21-279 (285)
180 3brb_A Proto-oncogene tyrosine 100.0 9.3E-37 3.2E-41 342.5 19.8 263 796-1079 29-308 (313)
181 2r5t_A Serine/threonine-protei 100.0 8.3E-37 2.9E-41 349.4 19.4 246 801-1071 38-288 (373)
182 1u46_A ACK-1, activated CDC42 100.0 1.1E-36 3.8E-41 338.1 19.8 260 800-1081 17-286 (291)
183 3cok_A Serine/threonine-protei 100.0 1.5E-36 5.1E-41 334.6 20.4 250 800-1073 10-263 (278)
184 2jii_A Serine/threonine-protei 100.0 9.7E-37 3.3E-41 348.2 19.5 262 800-1078 41-335 (352)
185 1fvr_A Tyrosine-protein kinase 100.0 1.1E-36 3.9E-41 344.0 19.8 257 800-1079 24-300 (327)
186 2qr7_A Ribosomal protein S6 ki 100.0 1.4E-36 4.7E-41 344.3 20.1 253 799-1073 20-278 (342)
187 1vzo_A Ribosomal protein S6 ki 100.0 8E-37 2.7E-41 348.8 18.3 255 800-1074 53-323 (355)
188 3kn6_A Ribosomal protein S6 ki 100.0 1E-36 3.5E-41 343.4 18.8 250 807-1073 17-271 (325)
189 1o6v_A Internalin A; bacterial 100.0 1.6E-35 5.6E-40 351.4 30.1 213 131-411 43-255 (466)
190 3dls_A PAS domain-containing s 100.0 9E-37 3.1E-41 345.3 18.2 243 799-1073 22-275 (335)
191 3lm5_A Serine/threonine-protei 100.0 2E-36 6.9E-41 341.7 20.9 263 791-1073 18-288 (327)
192 3c4z_A Rhodopsin kinase; Ser/T 100.0 4.3E-36 1.5E-40 357.0 24.6 253 801-1072 185-448 (543)
193 1nxk_A MAP kinase-activated pr 100.0 1.8E-36 6.2E-41 351.0 20.8 253 800-1073 60-322 (400)
194 2yfx_A Tyrosine-protein kinase 100.0 2.5E-36 8.5E-41 341.2 21.2 258 800-1078 29-303 (327)
195 3e7e_A HBUB1, BUB1A, mitotic c 100.0 3.4E-36 1.2E-40 345.5 22.6 250 799-1077 63-337 (365)
196 3bhy_A Death-associated protei 100.0 4.3E-36 1.5E-40 331.9 22.4 251 801-1073 5-266 (283)
197 4agu_A Cyclin-dependent kinase 100.0 4E-36 1.4E-40 337.0 22.4 262 801-1073 3-285 (311)
198 3ll6_A Cyclin G-associated kin 100.0 1.4E-36 4.7E-41 344.9 18.8 254 800-1078 27-307 (337)
199 2jam_A Calcium/calmodulin-depe 100.0 3.9E-36 1.3E-40 335.9 22.0 252 799-1073 7-262 (304)
200 4fl3_A Tyrosine-protein kinase 100.0 3.5E-36 1.2E-40 367.7 23.3 247 807-1077 375-629 (635)
201 3oz6_A Mitogen-activated prote 100.0 4E-36 1.4E-40 347.8 22.5 260 799-1073 7-329 (388)
202 3ttj_A Mitogen-activated prote 100.0 2E-36 6.8E-41 357.0 20.1 257 800-1073 61-356 (464)
203 2rku_A Serine/threonine-protei 100.0 4.6E-36 1.6E-40 333.6 21.9 249 800-1073 14-266 (294)
204 2w5a_A Serine/threonine-protei 100.0 1.2E-36 4.1E-41 335.6 16.8 257 800-1078 5-273 (279)
205 2yex_A Serine/threonine-protei 100.0 2.9E-36 9.8E-41 331.9 19.8 254 799-1073 5-262 (276)
206 1x8b_A WEE1HU, WEE1-like prote 100.0 1.8E-36 6E-41 335.8 18.1 246 799-1073 9-280 (289)
207 2owb_A Serine/threonine-protei 100.0 4.6E-36 1.6E-40 340.0 21.5 249 800-1073 40-292 (335)
208 2vgo_A Serine/threonine-protei 100.0 6.1E-36 2.1E-40 330.8 22.0 246 800-1072 13-262 (284)
209 2ac3_A MAP kinase-interacting 100.0 8.2E-37 2.8E-41 343.4 15.0 263 800-1073 11-296 (316)
210 2id5_A Lingo-1, leucine rich r 100.0 8.1E-36 2.8E-40 355.6 24.3 176 186-390 15-190 (477)
211 3o6n_A APL1; leucine-rich repe 100.0 1.6E-35 5.3E-40 343.4 25.7 136 108-268 43-178 (390)
212 2y7j_A Phosphorylase B kinase 100.0 2.2E-35 7.7E-40 338.0 26.6 258 794-1073 87-360 (365)
213 2h6d_A 5'-AMP-activated protei 100.0 8.1E-36 2.8E-40 328.3 21.9 248 800-1073 10-262 (276)
214 3gbz_A Kinase, CMGC CDK; ssgci 100.0 1.7E-36 5.9E-41 342.6 16.9 260 799-1073 32-319 (329)
215 3eqc_A Dual specificity mitoge 100.0 5.1E-36 1.7E-40 343.5 20.9 258 800-1073 32-325 (360)
216 3a7i_A MST3 kinase, serine/thr 100.0 1.3E-35 4.5E-40 331.4 23.7 249 800-1073 21-271 (303)
217 3sv0_A Casein kinase I-like; t 100.0 1.1E-35 3.7E-40 350.5 24.2 260 800-1077 6-276 (483)
218 2j7t_A Serine/threonine-protei 100.0 3.9E-36 1.3E-40 335.6 19.4 254 799-1073 17-276 (302)
219 2r3i_A Cell division protein k 100.0 1.4E-35 4.9E-40 330.5 23.6 260 801-1072 3-283 (299)
220 2wtk_C Serine/threonine-protei 100.0 1.9E-35 6.4E-40 330.6 24.4 251 800-1073 4-264 (305)
221 3mtl_A Cell division protein k 100.0 3.2E-36 1.1E-40 339.6 18.3 260 801-1072 2-281 (324)
222 3rp9_A Mitogen-activated prote 100.0 5.7E-36 1.9E-40 354.5 21.0 194 800-999 52-280 (458)
223 1ua2_A CAK, cell division prot 100.0 7.1E-36 2.4E-40 340.1 20.8 262 798-1073 7-292 (346)
224 2clq_A Mitogen-activated prote 100.0 1.8E-35 6E-40 329.1 23.4 252 802-1073 23-279 (295)
225 3n9x_A Phosphotransferase; mal 100.0 1.9E-35 6.4E-40 346.6 24.7 199 800-1004 25-253 (432)
226 1cm8_A Phosphorylated MAP kina 100.0 8.4E-36 2.9E-40 341.7 21.3 255 800-1073 24-308 (367)
227 1t4h_A Serine/threonine-protei 100.0 1.6E-35 5.3E-40 328.6 22.7 248 801-1073 26-283 (290)
228 3eb0_A Putative uncharacterize 100.0 7.7E-36 2.6E-40 344.7 21.0 258 798-1072 4-321 (383)
229 2vwi_A Serine/threonine-protei 100.0 2E-36 6.7E-41 338.1 15.5 263 799-1073 13-288 (303)
230 1wak_A Serine/threonine-protei 100.0 1.1E-35 3.8E-40 345.7 22.2 265 800-1073 36-392 (397)
231 2pml_X PFPK7, Ser/Thr protein 100.0 7.6E-36 2.6E-40 340.5 20.4 259 800-1073 30-323 (348)
232 4aaa_A Cyclin-dependent kinase 100.0 4.4E-36 1.5E-40 339.8 17.9 261 800-1073 24-307 (331)
233 3mwu_A Calmodulin-domain prote 100.0 1.5E-35 5E-40 353.5 23.3 251 800-1073 21-277 (486)
234 3com_A Serine/threonine-protei 100.0 3.6E-35 1.2E-39 329.7 25.1 251 799-1072 27-278 (314)
235 3nyv_A Calmodulin-domain prote 100.0 8.3E-36 2.9E-40 355.7 21.1 251 800-1073 25-282 (484)
236 3mi9_A Cell division protein k 100.0 1.8E-35 6.1E-40 337.8 22.8 263 800-1073 16-312 (351)
237 2j0j_A Focal adhesion kinase 1 100.0 1.3E-35 4.3E-40 364.1 23.1 257 799-1078 388-650 (656)
238 2x7f_A TRAF2 and NCK-interacti 100.0 5.2E-36 1.8E-40 338.5 18.1 259 793-1073 16-287 (326)
239 3pg1_A Mitogen-activated prote 100.0 8.1E-36 2.8E-40 342.2 20.0 269 790-1073 11-317 (362)
240 3pfq_A PKC-B, PKC-beta, protei 100.0 1.4E-35 4.7E-40 364.9 23.3 249 799-1072 339-597 (674)
241 3lij_A Calcium/calmodulin depe 100.0 2E-35 6.7E-40 352.9 23.8 251 800-1073 36-292 (494)
242 3byv_A Rhoptry kinase; malaria 100.0 9.7E-37 3.3E-41 351.5 11.9 241 800-1072 72-359 (377)
243 3nsz_A CK II alpha, casein kin 100.0 2.7E-35 9.3E-40 333.2 23.6 257 801-1073 36-320 (330)
244 3bz5_A Internalin-J, INLJ; leu 100.0 1.7E-34 5.8E-39 339.8 31.1 343 96-659 52-394 (457)
245 1phk_A Phosphorylase kinase; g 100.0 3.2E-35 1.1E-39 327.5 23.4 252 799-1072 15-283 (298)
246 3i6u_A CDS1, serine/threonine- 100.0 5.6E-36 1.9E-40 349.4 18.1 253 799-1073 133-400 (419)
247 3kvw_A DYRK2, dual specificity 100.0 2.6E-35 9E-40 344.6 23.6 197 800-1005 96-301 (429)
248 3q5i_A Protein kinase; CDPK, m 100.0 4.9E-35 1.7E-39 350.4 26.2 252 799-1073 34-302 (504)
249 3fme_A Dual specificity mitoge 100.0 1.9E-35 6.6E-40 327.9 20.4 252 800-1072 6-266 (290)
250 3q60_A ROP5B; pseudokinase, tr 100.0 8.8E-36 3E-40 342.8 18.3 252 801-1072 62-352 (371)
251 2id5_A Lingo-1, leucine rich r 100.0 1E-34 3.5E-39 346.0 27.7 171 114-288 15-185 (477)
252 1blx_A Cyclin-dependent kinase 100.0 3.2E-35 1.1E-39 332.1 22.0 265 798-1073 8-297 (326)
253 3an0_A Dual specificity mitoge 100.0 2.5E-35 8.6E-40 335.0 20.8 252 800-1072 50-310 (340)
254 2xrw_A Mitogen-activated prote 100.0 2.1E-35 7.3E-40 339.3 20.4 256 800-1073 24-319 (371)
255 4e7w_A Glycogen synthase kinas 100.0 1.9E-35 6.6E-40 342.1 19.6 256 800-1073 39-322 (394)
256 2y4i_B KSR2, HKSR2, kinase sup 100.0 7.3E-36 2.5E-40 336.2 15.6 258 799-1080 31-303 (319)
257 1z57_A Dual specificity protei 100.0 8.2E-35 2.8E-39 330.5 24.1 264 800-1078 13-336 (339)
258 1j1b_A Glycogen synthase kinas 100.0 3.6E-35 1.2E-39 342.7 20.9 259 801-1073 54-337 (420)
259 1zy4_A Serine/threonine-protei 100.0 5.6E-35 1.9E-39 326.2 21.3 253 799-1073 4-284 (303)
260 3oja_B Anopheles plasmodium-re 100.0 1.3E-34 4.3E-39 354.4 25.9 135 109-268 50-184 (597)
261 2fst_X Mitogen-activated prote 100.0 1.6E-35 5.4E-40 339.0 16.8 255 800-1073 28-312 (367)
262 2i6l_A Mitogen-activated prote 100.0 5.5E-35 1.9E-39 329.1 21.0 259 800-1073 10-306 (320)
263 3rgf_A Cyclin-dependent kinase 100.0 4.4E-35 1.5E-39 341.1 20.7 267 801-1073 20-334 (405)
264 3cek_A Dual specificity protei 100.0 7.4E-36 2.5E-40 335.1 13.7 253 798-1073 25-293 (313)
265 3qyz_A Mitogen-activated prote 100.0 4.9E-35 1.7E-39 335.6 20.7 262 799-1073 25-314 (364)
266 2ycf_A Serine/threonine-protei 100.0 3.2E-35 1.1E-39 331.3 18.4 251 800-1072 9-274 (322)
267 2wei_A Calmodulin-domain prote 100.0 1.1E-34 3.6E-39 321.4 22.0 251 799-1072 20-276 (287)
268 2vx3_A Dual specificity tyrosi 100.0 2.2E-34 7.4E-39 332.5 24.7 200 799-1005 52-260 (382)
269 2b9h_A MAP kinase FUS3, mitoge 100.0 1.6E-34 5.6E-39 330.2 23.1 263 799-1073 9-306 (353)
270 3fhr_A MAP kinase-activated pr 100.0 6.3E-35 2.2E-39 330.6 19.3 254 799-1073 26-288 (336)
271 1q8y_A SR protein kinase; tran 100.0 9.8E-35 3.4E-39 334.7 20.9 265 800-1073 18-334 (373)
272 4exu_A Mitogen-activated prote 100.0 1E-34 3.4E-39 333.7 20.3 254 800-1073 41-324 (371)
273 3e3p_A Protein kinase, putativ 100.0 1.5E-34 5E-39 331.5 21.6 265 794-1073 16-315 (360)
274 2eu9_A Dual specificity protei 100.0 3.4E-34 1.2E-38 327.7 23.2 259 800-1073 18-334 (355)
275 2rio_A Serine/threonine-protei 100.0 2.2E-34 7.4E-39 337.6 20.9 251 801-1072 15-295 (434)
276 3aln_A Dual specificity mitoge 100.0 2.2E-34 7.6E-39 325.2 19.7 255 800-1072 21-285 (327)
277 3coi_A Mitogen-activated prote 100.0 3.1E-34 1.1E-38 327.6 20.1 253 800-1073 23-306 (353)
278 2iwi_A Serine/threonine-protei 100.0 7.8E-35 2.7E-39 326.7 14.3 244 797-1073 27-284 (312)
279 3a99_A Proto-oncogene serine/t 100.0 8.2E-35 2.8E-39 327.5 13.3 242 799-1073 41-294 (320)
280 3p23_A Serine/threonine-protei 100.0 3.5E-34 1.2E-38 334.6 18.7 249 800-1072 23-283 (432)
281 2dyl_A Dual specificity mitoge 100.0 9.3E-34 3.2E-38 318.8 21.0 252 800-1073 24-284 (318)
282 3qa8_A MGC80376 protein; kinas 100.0 2E-34 6.7E-39 346.0 14.0 267 800-1078 13-308 (676)
283 4fcg_A Uncharacterized protein 100.0 1.4E-33 4.7E-38 317.8 15.6 275 1-365 29-314 (328)
284 3uqc_A Probable conserved tran 100.0 1.2E-32 4.2E-37 303.8 21.6 230 800-1079 30-265 (286)
285 2pzi_A Probable serine/threoni 100.0 4.9E-33 1.7E-37 345.0 19.6 239 800-1077 79-326 (681)
286 4fmz_A Internalin; leucine ric 100.0 1.4E-31 4.7E-36 305.1 29.4 103 544-652 244-346 (347)
287 3m2w_A MAP kinase-activated pr 100.0 2.3E-32 8E-37 304.4 21.7 228 800-1073 16-257 (299)
288 3o6n_A APL1; leucine-rich repe 100.0 2.5E-32 8.4E-37 316.5 21.4 332 206-699 44-377 (390)
289 3dzo_A Rhoptry kinase domain; 100.0 4.7E-33 1.6E-37 324.0 14.5 241 800-1072 77-363 (413)
290 4fmz_A Internalin; leucine ric 100.0 3.5E-31 1.2E-35 301.7 29.5 218 106-390 40-257 (347)
291 3oja_B Anopheles plasmodium-re 100.0 4.9E-32 1.7E-36 331.4 21.5 331 206-698 50-382 (597)
292 2ft3_A Biglycan; proteoglycan, 100.0 2.7E-31 9.2E-36 300.5 24.6 131 543-674 193-331 (332)
293 2vuw_A Serine/threonine-protei 100.0 7.5E-33 2.6E-37 313.9 10.0 238 800-1071 19-329 (336)
294 1ogq_A PGIP-2, polygalacturona 100.0 6E-32 2E-36 302.6 15.7 253 110-414 50-307 (313)
295 1xku_A Decorin; proteoglycan, 100.0 1.5E-30 5E-35 294.3 25.9 130 544-674 193-330 (330)
296 2ft3_A Biglycan; proteoglycan, 100.0 1.8E-30 6.2E-35 293.6 25.7 244 110-390 33-278 (332)
297 1xku_A Decorin; proteoglycan, 100.0 4.8E-30 1.6E-34 290.0 27.2 245 110-390 31-277 (330)
298 1z7x_W Ribonuclease inhibitor; 100.0 7.7E-34 2.6E-38 337.1 -9.2 86 544-629 314-412 (461)
299 1z7x_W Ribonuclease inhibitor; 100.0 2.1E-32 7.3E-37 324.7 -9.7 159 110-269 3-184 (461)
300 2z80_A TOLL-like receptor 2, v 100.0 2.4E-29 8.4E-34 287.0 15.3 182 110-292 52-235 (353)
301 2z66_A Variable lymphocyte rec 100.0 2.1E-28 7.2E-33 273.4 16.6 232 110-391 28-263 (306)
302 3ogk_B Coronatine-insensitive 99.9 3.8E-30 1.3E-34 315.6 -3.9 433 101-673 64-548 (592)
303 2z66_A Variable lymphocyte rec 99.9 4.8E-27 1.6E-31 262.4 21.4 248 113-413 10-262 (306)
304 2z80_A TOLL-like receptor 2, v 99.9 7E-28 2.4E-32 274.9 14.5 281 106-416 27-318 (353)
305 4fcg_A Uncharacterized protein 99.9 4.8E-27 1.7E-31 264.3 20.9 238 108-391 79-316 (328)
306 3zyj_A Leucine-rich repeat-con 99.9 1.1E-26 3.9E-31 273.1 23.5 133 542-676 159-292 (440)
307 3zyi_A Leucine-rich repeat-con 99.9 1.3E-26 4.4E-31 273.7 23.6 138 541-680 169-307 (452)
308 3zyi_A Leucine-rich repeat-con 99.9 2.5E-26 8.6E-31 271.2 23.9 247 111-412 55-303 (452)
309 3zyj_A Leucine-rich repeat-con 99.9 2.8E-26 9.4E-31 269.9 24.0 247 111-412 44-292 (440)
310 1wwl_A Monocyte differentiatio 99.9 4.7E-28 1.6E-32 271.0 7.4 249 105-412 38-309 (312)
311 3g06_A SSPH2 (leucine-rich rep 99.9 1.6E-26 5.6E-31 279.6 19.8 289 15-417 8-302 (622)
312 3ogk_B Coronatine-insensitive 99.9 8.5E-29 2.9E-33 303.6 -0.4 398 107-649 109-548 (592)
313 1ozn_A Reticulon 4 receptor; N 99.9 6.2E-26 2.1E-30 250.5 22.5 107 541-648 175-283 (285)
314 1ozn_A Reticulon 4 receptor; N 99.9 2.2E-26 7.6E-31 254.1 16.3 172 113-288 14-186 (285)
315 3g06_A SSPH2 (leucine-rich rep 99.9 5.5E-25 1.9E-29 266.2 28.8 115 110-244 40-154 (622)
316 1wwl_A Monocyte differentiatio 99.9 1.7E-27 5.8E-32 266.5 5.9 232 129-414 38-289 (312)
317 3o53_A Protein LRIM1, AGAP0063 99.9 3.2E-27 1.1E-31 264.9 6.1 258 93-414 17-278 (317)
318 3o53_A Protein LRIM1, AGAP0063 99.9 4.3E-27 1.5E-31 263.8 7.1 244 89-396 37-283 (317)
319 4azs_A Methyltransferase WBDD; 99.9 7.4E-27 2.5E-31 280.9 7.0 185 808-1002 241-437 (569)
320 2o6q_A Variable lymphocyte rec 99.9 1.2E-24 3.9E-29 238.1 21.7 216 27-291 2-217 (270)
321 3oja_A Leucine-rich immune mol 99.9 1.4E-25 4.7E-30 266.3 10.2 247 97-407 21-270 (487)
322 3oja_A Leucine-rich immune mol 99.9 2.7E-25 9.2E-30 263.8 12.1 225 126-412 22-250 (487)
323 2o6q_A Variable lymphocyte rec 99.9 5.2E-24 1.8E-28 232.9 20.5 156 522-678 65-220 (270)
324 2p1m_B Transport inhibitor res 99.9 1.6E-27 5.5E-32 292.4 -9.7 411 157-675 104-543 (594)
325 1p9a_G Platelet glycoprotein I 99.9 2.9E-24 9.8E-29 237.1 16.9 147 543-712 77-223 (290)
326 2z62_A TOLL-like receptor 4, v 99.9 8.8E-24 3E-28 232.0 18.7 139 541-680 98-241 (276)
327 2z62_A TOLL-like receptor 4, v 99.9 1.2E-23 4.1E-28 231.0 19.7 210 135-391 29-239 (276)
328 2p1m_B Transport inhibitor res 99.9 4.9E-27 1.7E-31 288.1 -10.5 378 176-676 99-519 (594)
329 3en9_A Glycoprotease, O-sialog 99.9 4E-24 1.4E-28 255.7 7.3 185 804-1004 339-539 (540)
330 1p9a_G Platelet glycoprotein I 99.9 2.9E-22 1E-26 220.9 21.6 203 130-389 6-208 (290)
331 3rfs_A Internalin B, repeat mo 99.9 2.5E-23 8.7E-28 227.6 12.0 153 521-681 88-240 (272)
332 3rfs_A Internalin B, repeat mo 99.9 1.2E-22 4.3E-27 222.1 16.9 176 106-286 37-212 (272)
333 3m19_A Variable lymphocyte rec 99.9 3.3E-22 1.1E-26 216.0 18.9 160 110-270 35-194 (251)
334 2ast_B S-phase kinase-associat 99.9 4E-24 1.4E-28 242.1 2.9 184 104-289 62-257 (336)
335 3goz_A Leucine-rich repeat-con 99.9 1.5E-23 5.2E-28 239.6 4.2 254 93-391 5-299 (362)
336 2xwt_C Thyrotropin receptor; s 99.9 1E-21 3.4E-26 210.6 16.7 176 111-291 32-217 (239)
337 3goz_A Leucine-rich repeat-con 99.9 4.7E-23 1.6E-27 235.6 5.1 202 89-290 25-264 (362)
338 3m19_A Variable lymphocyte rec 99.9 2.2E-21 7.5E-26 209.6 17.5 175 520-698 16-194 (251)
339 2ca6_A RAN GTPase-activating p 99.9 1.1E-23 3.7E-28 243.4 -1.8 248 101-393 23-320 (386)
340 2ca6_A RAN GTPase-activating p 99.9 2.8E-23 9.7E-28 239.8 1.5 250 89-385 35-339 (386)
341 2ast_B S-phase kinase-associat 99.9 1.1E-22 3.9E-27 230.1 4.6 253 111-396 48-313 (336)
342 4glp_A Monocyte differentiatio 99.8 1.8E-21 6.1E-26 217.4 12.5 228 110-390 64-308 (310)
343 4glp_A Monocyte differentiatio 99.8 1.9E-21 6.4E-26 217.2 12.6 228 134-413 64-308 (310)
344 2xwt_C Thyrotropin receptor; s 99.8 3.8E-21 1.3E-25 206.1 14.3 140 122-268 23-169 (239)
345 1zar_A RIO2 kinase; serine kin 99.8 3E-21 1E-25 211.4 9.9 154 792-976 81-252 (282)
346 1h6u_A Internalin H; cell adhe 99.8 2.6E-20 8.9E-25 207.4 17.6 208 115-390 24-231 (308)
347 1h6u_A Internalin H; cell adhe 99.8 2.9E-20 1E-24 207.0 17.9 169 106-289 37-205 (308)
348 4ay9_X Follicle-stimulating ho 99.8 4.9E-20 1.7E-24 209.3 19.4 240 113-409 12-256 (350)
349 4ay9_X Follicle-stimulating ho 99.8 2.1E-20 7.1E-25 212.4 15.8 191 96-291 19-214 (350)
350 2v70_A SLIT-2, SLIT homolog 2 99.8 2.2E-20 7.6E-25 197.0 13.9 157 521-681 14-171 (220)
351 2o6s_A Variable lymphocyte rec 99.8 3.4E-20 1.2E-24 194.1 14.8 163 110-280 28-190 (208)
352 2v9t_B SLIT homolog 2 protein 99.8 3.2E-20 1.1E-24 195.7 14.4 152 521-676 14-165 (220)
353 3cvr_A Invasion plasmid antige 99.8 2.6E-20 8.9E-25 222.4 12.0 195 19-289 33-240 (571)
354 2xot_A Amphoterin-induced prot 99.8 1.9E-20 6.4E-25 213.7 10.3 176 521-701 21-207 (361)
355 3e6j_A Variable lymphocyte rec 99.8 1.5E-19 5E-24 192.1 15.5 155 521-680 22-176 (229)
356 2o6s_A Variable lymphocyte rec 99.8 3.6E-19 1.2E-23 186.3 16.2 148 113-288 10-157 (208)
357 3e6j_A Variable lymphocyte rec 99.8 8.9E-19 3.1E-23 186.0 17.8 134 110-269 40-173 (229)
358 3cvr_A Invasion plasmid antige 99.8 9.6E-19 3.3E-23 208.9 18.0 196 111-377 60-255 (571)
359 4b8c_D Glucose-repressible alc 99.8 7.1E-20 2.4E-24 227.1 5.0 198 1-251 134-336 (727)
360 2v9t_B SLIT homolog 2 protein 99.8 5.1E-18 1.7E-22 178.9 15.8 153 113-269 14-166 (220)
361 2xot_A Amphoterin-induced prot 99.8 9.1E-19 3.1E-23 199.7 10.3 161 519-680 40-206 (361)
362 2v70_A SLIT-2, SLIT homolog 2 99.7 6.2E-18 2.1E-22 178.2 14.4 136 520-655 34-169 (220)
363 1h6t_A Internalin B; cell adhe 99.7 1.1E-17 3.9E-22 184.3 16.0 172 106-292 42-213 (291)
364 1m9s_A Internalin B; cell inva 99.7 1.6E-17 5.3E-22 200.9 17.7 170 106-290 39-208 (605)
365 1h6t_A Internalin B; cell adhe 99.7 1.1E-17 3.7E-22 184.5 14.7 162 112-288 26-187 (291)
366 1m9s_A Internalin B; cell inva 99.7 1.6E-17 5.5E-22 200.7 15.1 164 111-289 22-185 (605)
367 1dce_A Protein (RAB geranylger 99.7 4.2E-20 1.4E-24 222.0 -7.9 202 133-383 348-567 (567)
368 1dce_A Protein (RAB geranylger 99.7 6.1E-20 2.1E-24 220.6 -7.2 119 257-405 443-566 (567)
369 1zth_A RIO1 serine protein kin 99.7 1.6E-17 5.4E-22 179.7 11.3 137 802-952 48-219 (258)
370 4ezg_A Putative uncharacterize 99.7 3.3E-17 1.1E-21 169.5 12.0 154 106-268 40-194 (197)
371 1xeu_A Internalin C; cellular 99.7 9E-18 3.1E-22 182.1 8.0 168 108-291 17-184 (263)
372 1w8a_A SLIT protein; signaling 99.7 1.7E-17 6E-22 170.7 9.8 129 521-653 11-140 (192)
373 1w8a_A SLIT protein; signaling 99.7 5.1E-17 1.8E-21 167.2 11.3 135 545-682 10-145 (192)
374 1xeu_A Internalin C; cellular 99.7 1.9E-17 6.5E-22 179.6 7.8 81 326-411 17-97 (263)
375 4ezg_A Putative uncharacterize 99.7 5.4E-17 1.9E-21 167.9 10.8 154 515-677 41-195 (197)
376 3sb4_A Hypothetical leucine ri 99.7 1E-17 3.5E-22 188.5 5.8 58 206-264 100-157 (329)
377 2wfh_A SLIT homolog 2 protein 99.7 7.5E-17 2.6E-21 165.9 10.2 108 568-676 32-139 (193)
378 4b8c_D Glucose-repressible alc 99.7 6.4E-17 2.2E-21 200.6 9.0 148 521-678 250-406 (727)
379 2o6r_A Variable lymphocyte rec 99.6 9.3E-16 3.2E-20 155.7 12.5 114 567-680 28-141 (177)
380 2ell_A Acidic leucine-rich nuc 99.6 4.5E-16 1.5E-20 156.5 9.8 132 543-676 24-160 (168)
381 2wfh_A SLIT homolog 2 protein 99.6 9.5E-16 3.2E-20 157.7 12.1 128 521-653 13-140 (193)
382 3sb4_A Hypothetical leucine ri 99.6 2.1E-16 7.1E-21 177.8 7.6 102 254-382 225-327 (329)
383 2o6r_A Variable lymphocyte rec 99.6 1.5E-15 5E-20 154.2 12.1 132 521-656 10-141 (177)
384 2je0_A Acidic leucine-rich nuc 99.6 4.6E-16 1.6E-20 153.0 7.2 128 543-672 17-149 (149)
385 2ell_A Acidic leucine-rich nuc 99.6 1.6E-15 5.3E-20 152.5 11.2 137 518-658 24-165 (168)
386 4gyi_A RIO2 kinase; protein ki 99.6 1.7E-15 5.7E-20 169.4 7.3 144 795-953 89-266 (397)
387 2je0_A Acidic leucine-rich nuc 99.5 4E-15 1.4E-19 146.3 7.5 129 109-263 16-148 (149)
388 4fdw_A Leucine rich hypothetic 99.5 2E-13 7E-18 156.6 21.0 118 555-675 259-382 (401)
389 4fdw_A Leucine rich hypothetic 99.5 3.3E-13 1.1E-17 154.9 22.6 270 109-412 112-383 (401)
390 1a9n_A U2A', U2A'; complex (nu 99.5 7.3E-15 2.5E-19 148.8 6.7 130 541-676 17-153 (176)
391 4fs7_A Uncharacterized protein 99.5 4.2E-13 1.4E-17 154.8 21.3 153 128-288 65-217 (394)
392 3g39_A Variable lymphocyte rec 99.5 5.3E-14 1.8E-18 141.4 10.4 109 569-680 11-119 (170)
393 1a9n_A U2A', U2A'; complex (nu 99.5 3.9E-14 1.3E-18 143.4 8.5 132 516-653 17-154 (176)
394 2r9u_A Variable lymphocyte rec 99.5 1.5E-13 5.1E-18 138.6 10.6 105 570-677 15-119 (174)
395 1ds9_A Outer arm dynein; leuci 99.4 7.1E-16 2.4E-20 159.7 -7.6 150 106-285 14-180 (198)
396 4fs7_A Uncharacterized protein 99.4 1.7E-12 5.8E-17 149.7 19.6 67 146-215 59-125 (394)
397 1ds9_A Outer arm dynein; leuci 99.4 1.3E-15 4.4E-20 157.7 -6.3 111 177-293 43-154 (198)
398 3g39_A Variable lymphocyte rec 99.4 2.7E-13 9.3E-18 136.2 10.9 104 521-628 12-115 (170)
399 2r9u_A Variable lymphocyte rec 99.4 2.2E-13 7.5E-18 137.3 9.7 104 521-628 15-118 (174)
400 4gt6_A Cell surface protein; l 99.3 2.4E-10 8.2E-15 131.6 24.5 90 533-627 301-390 (394)
401 2ifg_A High affinity nerve gro 99.2 7.5E-12 2.6E-16 141.7 8.9 91 587-678 27-118 (347)
402 4gt6_A Cell surface protein; l 99.2 2.8E-10 9.6E-15 131.0 21.4 113 533-651 278-390 (394)
403 3un9_A NLR family member X1; l 99.2 2.6E-13 8.9E-18 154.3 -5.8 87 182-268 101-196 (372)
404 3un9_A NLR family member X1; l 99.2 3.9E-13 1.3E-17 152.8 -5.8 170 109-278 71-262 (372)
405 2ifg_A High affinity nerve gro 99.2 3.3E-11 1.1E-15 136.4 9.3 104 521-628 11-116 (347)
406 3tm0_A Aminoglycoside 3'-phosp 99.1 1.2E-10 3.9E-15 126.2 11.6 148 796-951 9-213 (263)
407 1nd4_A Aminoglycoside 3'-phosp 99.0 3.1E-10 1.1E-14 122.6 7.4 140 799-951 18-214 (264)
408 4h09_A Hypothetical leucine ri 98.9 5.8E-08 2E-12 111.0 24.1 81 533-615 276-356 (379)
409 4h09_A Hypothetical leucine ri 98.9 1.2E-07 4.3E-12 108.2 23.7 104 533-639 253-356 (379)
410 2ra8_A Uncharacterized protein 98.8 5.9E-10 2E-14 125.4 2.2 184 102-290 131-341 (362)
411 3dxp_A Putative acyl-COA dehyd 98.8 1E-08 3.5E-13 116.3 10.0 141 806-951 43-248 (359)
412 3sg8_A APH(2'')-ID; antibiotic 98.8 5.7E-09 2E-13 115.4 7.6 186 806-1003 25-287 (304)
413 3rw6_A Nuclear RNA export fact 98.7 3.6E-10 1.2E-14 120.4 -5.7 68 131-199 167-237 (267)
414 2ra8_A Uncharacterized protein 98.7 9E-09 3.1E-13 115.7 4.7 179 110-291 107-319 (362)
415 3r70_A Aminoglycoside phosphot 98.4 1.7E-06 5.9E-11 96.0 12.6 137 802-952 38-238 (320)
416 3d1u_A Putative fructosamine-3 98.3 1.3E-06 4.3E-11 95.2 10.7 140 805-950 19-215 (288)
417 3rw6_A Nuclear RNA export fact 98.3 4.7E-08 1.6E-12 104.1 -1.3 64 564-629 167-234 (267)
418 1io0_A Tropomodulin; LRR prote 98.3 9.8E-08 3.3E-12 96.8 0.7 99 97-195 23-136 (185)
419 1io0_A Tropomodulin; LRR prote 98.2 2E-07 6.8E-12 94.5 0.8 122 126-268 28-164 (185)
420 3tdw_A Gentamicin resistance p 98.1 1.1E-05 3.7E-10 88.8 12.8 135 807-951 25-224 (306)
421 3ovc_A Hygromycin-B 4-O-kinase 98.0 2E-05 7E-10 88.7 12.0 142 805-952 45-244 (362)
422 4gkh_A Aminoglycoside 3'-phosp 98.0 3.3E-05 1.1E-09 83.3 12.8 141 801-951 25-223 (272)
423 3ats_A Putative uncharacterize 98.0 1E-05 3.5E-10 91.3 8.6 79 807-885 26-121 (357)
424 3e4g_A ATP synthase subunit S, 97.8 7.7E-06 2.6E-10 80.6 2.3 84 110-193 61-150 (176)
425 3rfe_A Platelet glycoprotein I 97.7 1.5E-05 5.3E-10 75.0 3.8 71 619-712 12-83 (130)
426 2q83_A YTAA protein; 2635576, 97.6 0.00018 6.3E-09 80.3 11.8 140 807-951 38-252 (346)
427 2olc_A MTR kinase, methylthior 97.6 0.00017 5.8E-09 82.5 10.6 75 806-882 35-120 (397)
428 3e4g_A ATP synthase subunit S, 97.6 2E-05 6.9E-10 77.6 2.0 35 134-168 61-95 (176)
429 3jr1_A Putative fructosamine-3 97.5 0.00042 1.4E-08 75.8 11.1 137 806-947 41-232 (312)
430 3f7w_A Putative fructosamine-3 97.4 0.00027 9.2E-09 76.9 9.0 78 802-883 16-96 (288)
431 2pyw_A Uncharacterized protein 97.3 0.00017 5.9E-09 83.1 6.6 79 920-999 231-312 (420)
432 2ppq_A HSK, HK, homoserine kin 97.1 0.002 6.8E-08 71.1 11.1 158 791-951 7-217 (322)
433 1pgv_A TMD-1, tropomodulin TMD 96.9 0.00028 9.6E-09 70.8 2.3 94 99-192 30-136 (197)
434 1pgv_A TMD-1, tropomodulin TMD 96.9 0.00025 8.4E-09 71.2 1.5 119 128-267 35-169 (197)
435 3csv_A Aminoglycoside phosphot 96.8 0.0055 1.9E-07 67.9 11.8 141 807-952 24-218 (333)
436 1nw1_A Choline kinase (49.2 KD 96.8 0.0021 7.3E-08 73.9 8.7 72 807-884 79-159 (429)
437 3rfe_A Platelet glycoprotein I 96.7 0.0018 6E-08 60.7 6.0 54 522-578 12-66 (130)
438 1zyl_A Hypothetical protein YI 96.6 0.014 4.7E-07 64.5 13.7 157 791-951 11-223 (328)
439 2qg7_A Ethanolamine kinase PV0 96.6 0.0058 2E-07 70.6 10.5 73 807-884 114-188 (458)
440 3dxq_A Choline/ethanolamine ki 96.6 0.0033 1.1E-07 68.6 8.2 137 806-951 23-202 (301)
441 3feg_A Choline/ethanolamine ki 96.4 0.0081 2.8E-07 67.4 9.4 140 807-951 56-254 (379)
442 2yle_A Protein spire homolog 1 96.4 0.018 6.3E-07 57.9 10.9 105 882-1004 33-137 (229)
443 3c5i_A Choline kinase; choline 96.0 0.0088 3E-07 67.4 7.2 73 807-884 39-121 (369)
444 3i1a_A Spectinomycin phosphotr 95.8 0.056 1.9E-06 59.9 12.8 32 921-952 206-237 (339)
445 3f2s_A CK, chetk-alpha, cholin 95.2 0.045 1.5E-06 61.6 9.3 141 807-951 58-280 (401)
446 3mes_A Choline kinase; malaria 93.5 0.21 7.3E-06 56.7 9.9 139 807-951 76-291 (424)
447 3g15_A CK, chetk-alpha, cholin 88.0 0.91 3.1E-05 51.2 8.2 30 922-951 245-280 (401)
448 2k1k_A Ephrin type-A receptor 84.1 1.2 4E-05 31.0 3.8 31 734-764 7-37 (38)
449 2l2t_A Receptor tyrosine-prote 82.8 2 6.8E-05 30.8 4.6 30 738-767 10-39 (44)
450 2ks1_B Epidermal growth factor 79.1 2.5 8.7E-05 30.3 4.2 28 739-766 12-39 (44)
451 4ann_A ESSB; membrane protein, 74.6 8.5 0.00029 38.6 8.3 115 855-1004 43-158 (215)
452 4ano_A ESSB; membrane protein, 64.7 16 0.00053 36.8 7.7 114 855-1004 48-163 (219)
453 3cxl_A N-chimerin; SH2, RHO-GA 64.6 0.74 2.5E-05 53.0 -2.3 59 805-866 146-213 (463)
454 2jwa_A Receptor tyrosine-prote 63.3 7.8 0.00027 27.8 3.6 25 740-765 14-38 (44)
455 1cja_A Protein (actin-fragmin 46.5 50 0.0017 35.3 8.3 139 804-951 72-237 (342)
456 2lz0_A Uncharacterized protein 41.2 29 0.001 30.0 4.6 44 555-599 8-51 (100)
457 2lz0_A Uncharacterized protein 40.3 39 0.0013 29.2 5.3 45 533-578 10-54 (100)
No 1
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=100.00 E-value=3.8e-73 Score=715.76 Aligned_cols=643 Identities=28% Similarity=0.406 Sum_probs=508.4
Q ss_pred CHHHHHHHHhcccCCCCCCCCCCCCCCCCceeeeeEeeCCCCCeeeeecCCCccccccccCCCCCCCCCCCCcccCcCcc
Q 045553 1 KNALLQLKSAITEDPLGLTSNWNPKDTDSCSWHGVTCDPLSGRVTSLNLSSNLSRTSCSLLSLPPAAGPGGNFSFHFPCL 80 (1082)
Q Consensus 1 ~~~l~~~k~~~~~~~~~~~~~W~~~~~~~c~w~gv~C~~~~~~v~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (1082)
|+||++||+++. ||. .+++|. .++|||.|.||+|+ ++||++|||+++....... .+++ .
T Consensus 14 ~~all~~k~~~~-~~~-~l~~W~-~~~~~C~w~gv~C~--~~~v~~L~L~~~~l~g~~~--~l~~----------~---- 72 (768)
T 3rgz_A 14 IHQLISFKDVLP-DKN-LLPDWS-SNKNPCTFDGVTCR--DDKVTSIDLSSKPLNVGFS--AVSS----------S---- 72 (768)
T ss_dssp HHHHHHHHTTCS-CTT-SSTTCC-TTSCGGGSTTEEEE--TTEEEEEECTTSCCCEEHH--HHHH----------H----
T ss_pred HHHHHHHHhhCC-Ccc-cccCCC-CCCCCcCCcceEEC--CCcEEEEECCCCCcCCccC--ccCh----------h----
Confidence 579999999997 887 899998 46899999999999 7999999998752211000 0000 0
Q ss_pred cccccccCcccCCCCCCccccccccccCCCCCCEEEcccCCCcccCCh--hhcCCCCCCEEeCcCCCCCCCCCccc-cCC
Q 045553 81 QLHQHDRGNINSNSSDKLSGNLSRAIGDLTQLRVLLLAFNGFSGELPL--EIGQLSLLEILDLSFNSFHGPIPPTL-QNC 157 (1082)
Q Consensus 81 ~~~~~~~~~~~~~~~~~l~g~l~~~l~~l~~L~~L~L~~n~l~~~~p~--~~~~l~~L~~L~Ls~n~l~~~~p~~l-~~l 157 (1082)
+..+......+++.+++. .+|+.|+++++|++|+|++|.++|.+|. .++++++|++|+|++|.+++.+|..+ .++
T Consensus 73 -l~~L~~L~~l~~~~~~~~-~l~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~l 150 (768)
T 3rgz_A 73 -LLSLTGLESLFLSNSHIN-GSVSGFKCSASLTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLDFPGKVSGGLKL 150 (768)
T ss_dssp -TTTCTTCCEEECTTSCEE-ECCCCCCCCTTCCEEECCSSEEEEEGGGGGGGGGCTTCCEEECCSSEEECCSSCCSCCCC
T ss_pred -HhccCcccccCCcCCCcC-CCchhhccCCCCCEEECCCCcCCCcCCChHHHhCCCCCCEEECcCCccCCcCCHHHhccC
Confidence 111122233334444442 2458899999999999999999998998 89999999999999999998888776 899
Q ss_pred CCCCeEEccCcccccccCcc---ccCCCCCcEEEcccCcccccCCcccccccccccEEEcccCccCCCCCccccCCCCcc
Q 045553 158 SSLRLINLSGNQFNGTIPAF---FGQSPGFQVVSLSFNLLSGSVPEEFGDNCVSLEHILLAANSLTGSIPPSLGNCTELR 234 (1082)
Q Consensus 158 ~~L~~L~Ls~N~l~~~~p~~---~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~ 234 (1082)
++|++|+|++|++++..|.. +.++++|++|++++|++.+..|. ..+++|++|+|++|++++.+|. ++++++|+
T Consensus 151 ~~L~~L~Ls~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~---~~l~~L~~L~Ls~n~l~~~~~~-l~~l~~L~ 226 (768)
T 3rgz_A 151 NSLEVLDLSANSISGANVVGWVLSDGCGELKHLAISGNKISGDVDV---SRCVNLEFLDVSSNNFSTGIPF-LGDCSALQ 226 (768)
T ss_dssp TTCSEEECCSSCCEEETHHHHHHTTCCTTCCEEECCSSEEESCCBC---TTCTTCCEEECCSSCCCSCCCB-CTTCCSCC
T ss_pred CCCCEEECCCCccCCcCChhhhhhccCCCCCEEECCCCcccccCCc---ccCCcCCEEECcCCcCCCCCcc-cccCCCCC
Confidence 99999999999999888876 88999999999999999977665 3689999999999999987777 99999999
Q ss_pred EEEccCCcCCCCcCccccCCCCCCEEeCCCCcCcccCCccccCCCCCcEEEeccccCC-cccccCCCCCCcccccCCCcc
Q 045553 235 SLLLSSNMLQGDIPSSFGQLVNLEVLDLSRNFLSGIVPSELGMCKQLKVLVLRNDYGP-LYSREHGDLPIQPVVDGGEDY 313 (1082)
Q Consensus 235 ~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~n~~~-~~~~~~~~l~~~~~~~~~~~~ 313 (1082)
+|+|++|++++.+|..|..+++|++|++++|++++.+|.. .+++|++|++++|.+. ..+...... ...+.......
T Consensus 227 ~L~Ls~n~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~--~l~~L~~L~L~~n~l~~~ip~~~~~~-~~~L~~L~Ls~ 303 (768)
T 3rgz_A 227 HLDISGNKLSGDFSRAISTCTELKLLNISSNQFVGPIPPL--PLKSLQYLSLAENKFTGEIPDFLSGA-CDTLTGLDLSG 303 (768)
T ss_dssp EEECCSSCCCSCHHHHTTTCSSCCEEECCSSCCEESCCCC--CCTTCCEEECCSSEEEESCCCCSCTT-CTTCSEEECCS
T ss_pred EEECcCCcCCCcccHHHhcCCCCCEEECCCCcccCccCcc--ccCCCCEEECcCCccCCccCHHHHhh-cCcCCEEECcC
Confidence 9999999999999999999999999999999999887775 8999999999988654 333222221 01223333455
Q ss_pred cccCCCCCccccCCCCCcEEEcCCCcccCCCCcc-cccccCCCeEEcCCccccCCCCccccCCC-CCCEEecCCCcCccc
Q 045553 314 NFFDGGLPDSITRLPNLRVFWAPNLNLEGIFPQN-WELCSKLEMLNLAHNFFTGQIPASLGNCK-SLYFLDLSSNNLTGL 391 (1082)
Q Consensus 314 n~~~~~~p~~l~~l~~L~~L~l~~n~l~~~~~~~-l~~l~~L~~L~Ls~N~i~~~~p~~~~~l~-~L~~L~Ls~N~l~~~ 391 (1082)
|.+.+.+|..|+.+++|++|++++|.+.+..|.. +..+++|++|+|++|++++.+|..+.+++ +|+.|+|++|++++.
T Consensus 304 n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~ip~~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~~L~~L~Ls~N~l~~~ 383 (768)
T 3rgz_A 304 NHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGP 383 (768)
T ss_dssp SEEEECCCGGGGGCTTCCEEECCSSEEEEECCHHHHTTCTTCCEEECCSSEEEECCCTTHHHHTTTCSEEECCSSEEEEE
T ss_pred CcCCCccchHHhcCCCccEEECCCCcccCcCCHHHHhcCCCCCEEeCcCCccCccccHHHHhhhcCCcEEEccCCCcCCC
Confidence 6777777777777777777777777777555544 77777777777777777777777777776 777777777777776
Q ss_pred CCCCcc---cCcccEEEecCCcceecCCCCCCcccccccccccccceeeeeecccccccccccCcCCCCCCCCCceeEee
Q 045553 392 LPEEVS---VPCMAVFNVSQNLLSGEIPRISHSECSKMSVNWSMSQVDLIGFYTAFFYENALTSCAPFSSPSNGLFILHD 468 (1082)
Q Consensus 392 ~p~~~~---l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 468 (1082)
+|..+. +++|+.|++++|.+++.+|..- ..|. +++.++ +..+.+.+..+.....-.-+..++
T Consensus 384 ~~~~~~~~~~~~L~~L~L~~n~l~~~~p~~l-~~l~------~L~~L~--------Ls~N~l~~~~p~~l~~l~~L~~L~ 448 (768)
T 3rgz_A 384 ILPNLCQNPKNTLQELYLQNNGFTGKIPPTL-SNCS------ELVSLH--------LSFNYLSGTIPSSLGSLSKLRDLK 448 (768)
T ss_dssp CCTTTTCSTTCCCCEEECCSSEEEEECCGGG-GGCT------TCCEEE--------CCSSEEESCCCGGGGGCTTCCEEE
T ss_pred cChhhhhcccCCccEEECCCCccccccCHHH-hcCC------CCCEEE--------CcCCcccCcccHHHhcCCCCCEEE
Confidence 666552 5667777777777777666321 1111 112222 222333333222222223355678
Q ss_pred ccCCcccCCCCCccccCCCccccccceeeeccCCCccccCCcccccccCCceeEEEccCCcccccCCccccccCCcccEE
Q 045553 469 FSNNLFTGPVPPFLIDSDSLSSRPYYGFWLSGNSLKGNLSTYPFDLCLSLDGLIFDIGNNKLIGEVPSDMGSHCKCMKFL 548 (1082)
Q Consensus 469 l~~n~~~g~~p~~~~~~~~l~~~~~~~~~~~~n~~~~~l~~~p~~~~~~~~l~~l~l~~n~l~~~ip~~~~~~~~~L~~L 548 (1082)
+++|.++|.+|..+..+..+ ..+++++|.+++. +|..+..+.+|++|++++|++.+.+|.++.. +++|++|
T Consensus 449 L~~n~l~~~~p~~~~~l~~L-----~~L~L~~N~l~~~---~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~-l~~L~~L 519 (768)
T 3rgz_A 449 LWLNMLEGEIPQELMYVKTL-----ETLILDFNDLTGE---IPSGLSNCTNLNWISLSNNRLTGEIPKWIGR-LENLAIL 519 (768)
T ss_dssp CCSSCCCSCCCGGGGGCTTC-----CEEECCSSCCCSC---CCGGGGGCTTCCEEECCSSCCCSCCCGGGGG-CTTCCEE
T ss_pred CCCCcccCcCCHHHcCCCCc-----eEEEecCCcccCc---CCHHHhcCCCCCEEEccCCccCCcCChHHhc-CCCCCEE
Confidence 89999999999888766554 5677888888764 5777888899999999999999999988764 6789999
Q ss_pred EccCCcccccCccccCCCCCCCEEEccCCCCCCCCcccc-----------------------------------------
Q 045553 549 SMAGNEFVGLIPQSFTNFDSLRNLNLSRNHLQGPLPSYI----------------------------------------- 587 (1082)
Q Consensus 549 ~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~----------------------------------------- 587 (1082)
+|++|++++.+|..|..+++|++|+|++|.++|.+|..+
T Consensus 520 ~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 599 (768)
T 3rgz_A 520 KLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGI 599 (768)
T ss_dssp ECCSSCCEEECCGGGGGCTTCCEEECCSSEEESBCCGGGGTTTTCBCCSTTCSCEEEEEECCSCCTTCCSSEEEEECTTC
T ss_pred ECCCCcccCcCCHHHcCCCCCCEEECCCCccCCcCChHHhcccchhhhhccccccccccccccccccccccccccccccc
Confidence 999999999999999999999999999999987777544
Q ss_pred -----------------------------cCCCCCCEEEcCCCcCCccCchhhhcCcccchhhccCcccCCCCCccccCC
Q 045553 588 -----------------------------NKMEDLKFLSLSLNNFTGAIPWELTQLASLEVLELSANSLSGEIPSEFSKL 638 (1082)
Q Consensus 588 -----------------------------~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l 638 (1082)
..+++|++|+|++|+++|.+|..|++++.|+.|+|++|+++|.+|..|+.+
T Consensus 600 ~~~~~~~l~~~~~~~l~~~~~~g~~~~~~~~l~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~L 679 (768)
T 3rgz_A 600 RSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDL 679 (768)
T ss_dssp CGGGGGGGGGTCCSCTTSCEEEEECCCSCSSSBCCCEEECCSSCCBSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGC
T ss_pred cchhhhccccccccccccceecccCchhhhccccccEEECcCCcccccCCHHHhccccCCEEeCcCCccCCCCChHHhCC
Confidence 335789999999999999999999999999999999999999999999999
Q ss_pred cccceecccCcccCCCCCCCCCCCCcccEEeccCCccccCCCCCcc---cccccCCCCCCCC
Q 045553 639 EHLNVLRLDHNNLTGRIPPGFGTRSSLSIFDVSFNNLSGSAPRNSL---IKCENVQGNPNLQ 697 (1082)
Q Consensus 639 ~~L~~L~L~~N~l~~~~p~~~~~l~~L~~l~ls~N~l~~~~p~~~~---~~~~~~~~Np~~c 697 (1082)
++|+.|||++|+++|.+|..|..+++|++||+++|+|+|.+|.... +....+.|||++|
T Consensus 680 ~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~ls~N~l~g~iP~~~~~~~~~~~~~~gN~~Lc 741 (768)
T 3rgz_A 680 RGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIPEMGQFETFPPAKFLNNPGLC 741 (768)
T ss_dssp TTCCEEECCSSCCEECCCGGGGGCCCCSEEECCSSEEEEECCSSSSGGGSCGGGGCSCTEEE
T ss_pred CCCCEEECCCCcccCcCChHHhCCCCCCEEECcCCcccccCCCchhhccCCHHHhcCCchhc
Confidence 9999999999999999999999999999999999999999998754 4566899999994
No 2
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=100.00 E-value=9.1e-58 Score=575.61 Aligned_cols=528 Identities=30% Similarity=0.421 Sum_probs=357.3
Q ss_pred CCCCcccccccc---ccCCCCCCEEEcccCCCcccCChhhcCCCCCCEEeCcCCCCCCCCCccccCCCCCCeEEccCccc
Q 045553 94 SSDKLSGNLSRA---IGDLTQLRVLLLAFNGFSGELPLEIGQLSLLEILDLSFNSFHGPIPPTLQNCSSLRLINLSGNQF 170 (1082)
Q Consensus 94 ~~~~l~g~l~~~---l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l 170 (1082)
+.+.+++..|.. +.++++|++|+|++|.+++..| +..+++|++|+|++|.+++.+|. ++++++|++|+|++|++
T Consensus 159 s~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~Ls~n~l~~~~~~-l~~l~~L~~L~Ls~n~l 235 (768)
T 3rgz_A 159 SANSISGANVVGWVLSDGCGELKHLAISGNKISGDVD--VSRCVNLEFLDVSSNNFSTGIPF-LGDCSALQHLDISGNKL 235 (768)
T ss_dssp CSSCCEEETHHHHHHTTCCTTCCEEECCSSEEESCCB--CTTCTTCCEEECCSSCCCSCCCB-CTTCCSCCEEECCSSCC
T ss_pred CCCccCCcCChhhhhhccCCCCCEEECCCCcccccCC--cccCCcCCEEECcCCcCCCCCcc-cccCCCCCEEECcCCcC
Confidence 344444444444 4555555555555555554433 25566666666666666655555 66666666666666666
Q ss_pred ccccCccccCCCCCcEEEcccCcccccCCcccccccccccEEEcccCccCCCCCccccCC-CCccEEEccCCcCCCCcCc
Q 045553 171 NGTIPAFFGQSPGFQVVSLSFNLLSGSVPEEFGDNCVSLEHILLAANSLTGSIPPSLGNC-TELRSLLLSSNMLQGDIPS 249 (1082)
Q Consensus 171 ~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l-~~L~~L~L~~N~l~~~~p~ 249 (1082)
++.+|..|..+++|++|+|++|++.+.+|.. .+++|++|++++|++++.+|..+..+ ++|++|+|++|++++.+|.
T Consensus 236 ~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~---~l~~L~~L~L~~n~l~~~ip~~~~~~~~~L~~L~Ls~n~l~~~~p~ 312 (768)
T 3rgz_A 236 SGDFSRAISTCTELKLLNISSNQFVGPIPPL---PLKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPP 312 (768)
T ss_dssp CSCHHHHTTTCSSCCEEECCSSCCEESCCCC---CCTTCCEEECCSSEEEESCCCCSCTTCTTCSEEECCSSEEEECCCG
T ss_pred CCcccHHHhcCCCCCEEECCCCcccCccCcc---ccCCCCEEECcCCccCCccCHHHHhhcCcCCEEECcCCcCCCccch
Confidence 6666666666666666666666666655554 45666666666666666666666554 6677777777776666666
Q ss_pred cccCCCCCCEEeCCCCcCcccCCcc-ccCCCCCcEEEeccccCC-cccccCCCCCCcccccCCCcccccCCCCCccccC-
Q 045553 250 SFGQLVNLEVLDLSRNFLSGIVPSE-LGMCKQLKVLVLRNDYGP-LYSREHGDLPIQPVVDGGEDYNFFDGGLPDSITR- 326 (1082)
Q Consensus 250 ~~~~l~~L~~L~Ls~N~l~~~~p~~-l~~l~~L~~L~l~~n~~~-~~~~~~~~l~~~~~~~~~~~~n~~~~~~p~~l~~- 326 (1082)
.|+.+++|++|++++|++++.+|.. +..+++|++|++++|.+. ..+.....++ ..+.....+.|.+.+.+|..+..
T Consensus 313 ~~~~l~~L~~L~L~~n~l~~~ip~~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~-~~L~~L~Ls~N~l~~~~~~~~~~~ 391 (768)
T 3rgz_A 313 FFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLS-ASLLTLDLSSNNFSGPILPNLCQN 391 (768)
T ss_dssp GGGGCTTCCEEECCSSEEEEECCHHHHTTCTTCCEEECCSSEEEECCCTTHHHHT-TTCSEEECCSSEEEEECCTTTTCS
T ss_pred HHhcCCCccEEECCCCcccCcCCHHHHhcCCCCCEEeCcCCccCccccHHHHhhh-cCCcEEEccCCCcCCCcChhhhhc
Confidence 6666677777777777666556654 666667777776666443 1111111110 01222223445555555555555
Q ss_pred -CCCCcEEEcCCCcccCCCCcccccccCCCeEEcCCccccCCCCccccCCCCCCEEecCCCcCcccCCCCc-ccCcccEE
Q 045553 327 -LPNLRVFWAPNLNLEGIFPQNWELCSKLEMLNLAHNFFTGQIPASLGNCKSLYFLDLSSNNLTGLLPEEV-SVPCMAVF 404 (1082)
Q Consensus 327 -l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~-~l~~L~~L 404 (1082)
+++|++|++++|.+.+..|..+..+++|++|+|++|++++.+|..+..+++|+.|+|++|++++.+|..+ .+++|+.|
T Consensus 392 ~~~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L 471 (768)
T 3rgz_A 392 PKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETL 471 (768)
T ss_dssp TTCCCCEEECCSSEEEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEE
T ss_pred ccCCccEEECCCCccccccCHHHhcCCCCCEEECcCCcccCcccHHHhcCCCCCEEECCCCcccCcCCHHHcCCCCceEE
Confidence 5566666666666666666666666666666666666666666666666666666666666666555554 35566666
Q ss_pred EecCCcceecCCCCCCcccccccccccccceeeeeecccccccccccCcCCCCCCCCCceeEeeccCCcccCCCCCcccc
Q 045553 405 NVSQNLLSGEIPRISHSECSKMSVNWSMSQVDLIGFYTAFFYENALTSCAPFSSPSNGLFILHDFSNNLFTGPVPPFLID 484 (1082)
Q Consensus 405 ~l~~N~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~n~~~g~~p~~~~~ 484 (1082)
++++|+++|.+|.. ...-.-+..+++++|.++|.+|.++..
T Consensus 472 ~L~~N~l~~~~p~~---------------------------------------l~~l~~L~~L~L~~N~l~~~~p~~~~~ 512 (768)
T 3rgz_A 472 ILDFNDLTGEIPSG---------------------------------------LSNCTNLNWISLSNNRLTGEIPKWIGR 512 (768)
T ss_dssp ECCSSCCCSCCCGG---------------------------------------GGGCTTCCEEECCSSCCCSCCCGGGGG
T ss_pred EecCCcccCcCCHH---------------------------------------HhcCCCCCEEEccCCccCCcCChHHhc
Confidence 66666665554421 001111345678888888888888776
Q ss_pred CCCccccccceeeeccCCCccccCCcccccccCCceeEEEccCCcccccCCccccccCC---------------------
Q 045553 485 SDSLSSRPYYGFWLSGNSLKGNLSTYPFDLCLSLDGLIFDIGNNKLIGEVPSDMGSHCK--------------------- 543 (1082)
Q Consensus 485 ~~~l~~~~~~~~~~~~n~~~~~l~~~p~~~~~~~~l~~l~l~~n~l~~~ip~~~~~~~~--------------------- 543 (1082)
+..| ..+++++|.+++. +|..++.+.+|++|++++|++.|.+|..++....
T Consensus 513 l~~L-----~~L~L~~N~l~~~---~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 584 (768)
T 3rgz_A 513 LENL-----AILKLSNNSFSGN---IPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANFIAGKRYVYIKNDGMK 584 (768)
T ss_dssp CTTC-----CEEECCSSCCEEE---CCGGGGGCTTCCEEECCSSEEESBCCGGGGTTTTCBCCSTTCSCEEEEEECCSCC
T ss_pred CCCC-----CEEECCCCcccCc---CCHHHcCCCCCCEEECCCCccCCcCChHHhcccchhhhhcccccccccccccccc
Confidence 6554 4567778877653 5677788888888888888888888887765321
Q ss_pred ------------------------cccEEEccCCcccccCccccCCCCCCCEEEccCCCCCCCCcccccCCCCCCEEEcC
Q 045553 544 ------------------------CMKFLSMAGNEFVGLIPQSFTNFDSLRNLNLSRNHLQGPLPSYINKMEDLKFLSLS 599 (1082)
Q Consensus 544 ------------------------~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls 599 (1082)
.+..++++.|.+.|.+|..|..+++|++|||++|+++|.+|..|+.+++|+.|+|+
T Consensus 585 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~g~~~~~~~~l~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~Ls 664 (768)
T 3rgz_A 585 KECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLG 664 (768)
T ss_dssp TTCCSSEEEEECTTCCGGGGGGGGGTCCSCTTSCEEEEECCCSCSSSBCCCEEECCSSCCBSCCCGGGGGCTTCCEEECC
T ss_pred ccccccccccccccccchhhhccccccccccccceecccCchhhhccccccEEECcCCcccccCCHHHhccccCCEEeCc
Confidence 12233445577788888889999999999999999999999999999999999999
Q ss_pred CCcCCccCchhhhcCcccchhhccCcccCCCCCccccCCcccceecccCcccCCCCCCCCCCCCcccEEeccCCccc
Q 045553 600 LNNFTGAIPWELTQLASLEVLELSANSLSGEIPSEFSKLEHLNVLRLDHNNLTGRIPPGFGTRSSLSIFDVSFNNLS 676 (1082)
Q Consensus 600 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~l~ls~N~l~ 676 (1082)
+|+++|.+|..|+++++|+.|||++|+++|.+|..+..+++|++|+|++|+++|.+|.. ..+..+....+.+|+--
T Consensus 665 ~N~l~g~ip~~l~~L~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~ls~N~l~g~iP~~-~~~~~~~~~~~~gN~~L 740 (768)
T 3rgz_A 665 HNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIPEM-GQFETFPPAKFLNNPGL 740 (768)
T ss_dssp SSCCCSCCCGGGGGCTTCCEEECCSSCCEECCCGGGGGCCCCSEEECCSSEEEEECCSS-SSGGGSCGGGGCSCTEE
T ss_pred CCccCCCCChHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECcCCcccccCCCc-hhhccCCHHHhcCCchh
Confidence 99999999999999999999999999999999999999999999999999999999975 34555555566777643
No 3
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=100.00 E-value=5.5e-55 Score=545.39 Aligned_cols=547 Identities=20% Similarity=0.231 Sum_probs=392.8
Q ss_pred CCCccccccccccCCCCCCEEEcccCCCcccCChhhcCCCCCCEEeCcCCCCCCCCCccccCCCCCCeEEccCccccccc
Q 045553 95 SDKLSGNLSRAIGDLTQLRVLLLAFNGFSGELPLEIGQLSLLEILDLSFNSFHGPIPPTLQNCSSLRLINLSGNQFNGTI 174 (1082)
Q Consensus 95 ~~~l~g~l~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~ 174 (1082)
.+.+.+..+..|.++++|++|+|++|.+++..|..|+++++|++|+|++|.+++..+..|+++++|++|+|++|++++..
T Consensus 34 ~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~ 113 (680)
T 1ziw_A 34 HNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELSQLSDKTFAFCTNLTELHLMSNSIQKIK 113 (680)
T ss_dssp SSCCCCCCGGGGGGGTTCSEEECCSSCCCCCCTTHHHHCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCC
T ss_pred CCCCCCcCHHHHhCCCcCcEEECCCCccCccCHHHHhcccCcCEEECCCCccCccChhhhccCCCCCEEECCCCccCccC
Confidence 35555555556666777777777777776666666677777777777777766433345667777777777777776555
Q ss_pred CccccCCCCCcEEEcccCcccccCCcccccccccccEEEcccCccCCCCCcccc--CCCCccEEEccCCcCCCCcCcccc
Q 045553 175 PAFFGQSPGFQVVSLSFNLLSGSVPEEFGDNCVSLEHILLAANSLTGSIPPSLG--NCTELRSLLLSSNMLQGDIPSSFG 252 (1082)
Q Consensus 175 p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~~~~~~--~l~~L~~L~L~~N~l~~~~p~~~~ 252 (1082)
|..|+++++|++|+|++|.+++..|..+. .+++|++|++++|++++..+..+. .+++|++|++++|++++..|..|.
T Consensus 114 ~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~-~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~ 192 (680)
T 1ziw_A 114 NNPFVKQKNLITLDLSHNGLSSTKLGTQV-QLENLQELLLSNNKIQALKSEELDIFANSSLKKLELSSNQIKEFSPGCFH 192 (680)
T ss_dssp SCTTTTCTTCCEEECCSSCCSCCCCCSSS-CCTTCCEEECCSSCCCCBCHHHHGGGTTCEESEEECTTCCCCCBCTTGGG
T ss_pred hhHccccCCCCEEECCCCcccccCchhhc-ccccCCEEEccCCcccccCHHHhhccccccccEEECCCCcccccChhhhh
Confidence 56666777777777777776654444443 466777777777776655554433 346677777777776666666555
Q ss_pred CCC---------------------------CCCEEeCCCCcCcccCCccccCCCC--CcEEEeccccCCcccccCCCCCC
Q 045553 253 QLV---------------------------NLEVLDLSRNFLSGIVPSELGMCKQ--LKVLVLRNDYGPLYSREHGDLPI 303 (1082)
Q Consensus 253 ~l~---------------------------~L~~L~Ls~N~l~~~~p~~l~~l~~--L~~L~l~~n~~~~~~~~~~~l~~ 303 (1082)
.++ +|++|++++|.+++..|..|..++. |+.|++++
T Consensus 193 ~l~~L~~L~l~~~~l~~~~~~~~~~~l~~~~L~~L~L~~n~l~~~~~~~~~~l~~~~L~~L~Ls~--------------- 257 (680)
T 1ziw_A 193 AIGRLFGLFLNNVQLGPSLTEKLCLELANTSIRNLSLSNSQLSTTSNTTFLGLKWTNLTMLDLSY--------------- 257 (680)
T ss_dssp GSSEECEEECTTCCCHHHHHHHHHHHHTTSCCCEEECTTSCCCEECTTTTGGGGGSCCCEEECTT---------------
T ss_pred hhhhhhhhhccccccChhhHHHHHHHhhhccccEEEccCCcccccChhHhhccCcCCCCEEECCC---------------
Confidence 544 4555555555555555555555543 66666655
Q ss_pred cccccCCCcccccCCCCCccccCCCCCcEEEcCCCcccCCCCcccccccCCCeEEcCCccccC-----CCCc----cccC
Q 045553 304 QPVVDGGEDYNFFDGGLPDSITRLPNLRVFWAPNLNLEGIFPQNWELCSKLEMLNLAHNFFTG-----QIPA----SLGN 374 (1082)
Q Consensus 304 ~~~~~~~~~~n~~~~~~p~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~N~i~~-----~~p~----~~~~ 374 (1082)
|.+.+..|..|..+++|++|++++|++.+..+..|..+++|++|++++|...+ .+|. .|..
T Consensus 258 ----------n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~~~~~~~~~~~~lp~i~~~~~~~ 327 (680)
T 1ziw_A 258 ----------NNLNVVGNDSFAWLPQLEYFFLEYNNIQHLFSHSLHGLFNVRYLNLKRSFTKQSISLASLPKIDDFSFQW 327 (680)
T ss_dssp ----------SCCCEECTTTTTTCTTCCEEECCSCCBSEECTTTTTTCTTCCEEECTTCBCCC------CCEECTTTTTT
T ss_pred ----------CCcCccCcccccCcccccEeeCCCCccCccChhhhcCCCCccEEeccchhhhcccccccccccChhhccc
Confidence 44455556677777788888888888777777777777888888887765543 2232 5677
Q ss_pred CCCCCEEecCCCcCcccCCCCc-ccCcccEEEecCCcceec-CCCCCCcccccccccccccceeeeeecccccccccccC
Q 045553 375 CKSLYFLDLSSNNLTGLLPEEV-SVPCMAVFNVSQNLLSGE-IPRISHSECSKMSVNWSMSQVDLIGFYTAFFYENALTS 452 (1082)
Q Consensus 375 l~~L~~L~Ls~N~l~~~~p~~~-~l~~L~~L~l~~N~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 452 (1082)
+++|++|+|++|++++..+..+ .+++|+.|++++|.+.+. ++... +..
T Consensus 328 l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~~~~~~l~~~~------------------------------f~~ 377 (680)
T 1ziw_A 328 LKCLEHLNMEDNDIPGIKSNMFTGLINLKYLSLSNSFTSLRTLTNET------------------------------FVS 377 (680)
T ss_dssp CTTCCEEECCSCCBCCCCTTTTTTCTTCCEEECTTCBSCCCEECTTT------------------------------TGG
T ss_pred CCCCCEEECCCCccCCCChhHhccccCCcEEECCCCchhhhhcchhh------------------------------hcc
Confidence 7788888888888877766655 567788888887775421 11110 000
Q ss_pred cCCCCCCCCCceeEeeccCCcccCCCCCccccCCCccccccceeeeccCCCccccCCcccccccCCceeEEEccCCcccc
Q 045553 453 CAPFSSPSNGLFILHDFSNNLFTGPVPPFLIDSDSLSSRPYYGFWLSGNSLKGNLSTYPFDLCLSLDGLIFDIGNNKLIG 532 (1082)
Q Consensus 453 ~~~~~~~~~~~~~~~~l~~n~~~g~~p~~~~~~~~l~~~~~~~~~~~~n~~~~~l~~~p~~~~~~~~l~~l~l~~n~l~~ 532 (1082)
+. ..-+..+++++|.+++..|..+..+..+ ..+++++|.+++.+. +..+....++++|++++|++.
T Consensus 378 ~~------~~~L~~L~L~~n~l~~~~~~~~~~l~~L-----~~L~L~~N~l~~~~~--~~~~~~l~~L~~L~Ls~n~l~- 443 (680)
T 1ziw_A 378 LA------HSPLHILNLTKNKISKIESDAFSWLGHL-----EVLDLGLNEIGQELT--GQEWRGLENIFEIYLSYNKYL- 443 (680)
T ss_dssp GT------TSCCCEEECTTSCCCEECTTTTTTCTTC-----CEEECCSSCCEEECC--SGGGTTCTTCCEEECCSCSEE-
T ss_pred cc------cCcCceEECCCCCCCeEChhhhhCCCCC-----CEEeCCCCcCccccC--cccccCcccccEEecCCCCcc-
Confidence 00 0113456788899988777777665554 467778888765432 145567788999999999988
Q ss_pred cCCccccccCCcccEEEccCCccc--ccCccccCCCCCCCEEEccCCCCCCCCcccccCCCCCCEEEcCCCcCCccCc--
Q 045553 533 EVPSDMGSHCKCMKFLSMAGNEFV--GLIPQSFTNFDSLRNLNLSRNHLQGPLPSYINKMEDLKFLSLSLNNFTGAIP-- 608 (1082)
Q Consensus 533 ~ip~~~~~~~~~L~~L~L~~N~i~--~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p-- 608 (1082)
.++...+..+++|+.|++++|.++ +..|..|..+++|++|+|++|+|+++.+..|..+++|++|+|++|++++..+
T Consensus 444 ~~~~~~~~~~~~L~~L~l~~n~l~~~~~~p~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~ 523 (680)
T 1ziw_A 444 QLTRNSFALVPSLQRLMLRRVALKNVDSSPSPFQPLRNLTILDLSNNNIANINDDMLEGLEKLEILDLQHNNLARLWKHA 523 (680)
T ss_dssp ECCTTTTTTCTTCCEEECTTSCCBCTTCSSCTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCGGGGSTT
T ss_pred eeChhhhhcCcccccchhccccccccccCCcccccCCCCCEEECCCCCCCcCChhhhccccccCEEeCCCCCccccchhh
Confidence 566666778899999999999997 5788999999999999999999998888889999999999999999986522
Q ss_pred ------hhhhcCcccchhhccCcccCCCCCccccCCcccceecccCcccCCCCCCCCCCCCcccEEeccCCccccCCCCC
Q 045553 609 ------WELTQLASLEVLELSANSLSGEIPSEFSKLEHLNVLRLDHNNLTGRIPPGFGTRSSLSIFDVSFNNLSGSAPRN 682 (1082)
Q Consensus 609 ------~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~l~ls~N~l~~~~p~~ 682 (1082)
..|.++++|++|+|++|+|+...+..|.++++|+.|+|++|+|++..+..|..+++|+.|++++|++++..|..
T Consensus 524 ~~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~ 603 (680)
T 1ziw_A 524 NPGGPIYFLKGLSHLHILNLESNGFDEIPVEVFKDLFELKIIDLGLNNLNTLPASVFNNQVSLKSLNLQKNLITSVEKKV 603 (680)
T ss_dssp STTSCCCTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCCCBCCHHH
T ss_pred ccCCcchhhcCCCCCCEEECCCCCCCCCCHHHcccccCcceeECCCCCCCcCCHhHhCCCCCCCEEECCCCcCCccChhH
Confidence 23789999999999999999655567999999999999999999887888899999999999999999866642
Q ss_pred -----cccccccCCCCCCCCCCCCCCCCCccccc
Q 045553 683 -----SLIKCENVQGNPNLQLCHTDPSSSEWERQ 711 (1082)
Q Consensus 683 -----~~~~~~~~~~Np~~c~c~~~~~~~~~~~~ 711 (1082)
..+....+.+|||.|+|....|...|...
T Consensus 604 ~~~~~~~L~~l~l~~N~~~c~c~~~~~~~~~~~~ 637 (680)
T 1ziw_A 604 FGPAFRNLTELDMRFNPFDCTCESIAWFVNWINE 637 (680)
T ss_dssp HHHHHTTCSEEECTTCCCCBCCCCCSSEECCSSC
T ss_pred hcccccccCEEEccCCCcccCCccHHHHHHHHHh
Confidence 34567789999999999865666677654
No 4
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=100.00 E-value=6.8e-56 Score=545.69 Aligned_cols=497 Identities=19% Similarity=0.266 Sum_probs=374.1
Q ss_pred CHHHHHHHHhcccCCCCCC-------CCCCCCCCCCcee---eeeEeeCCCCCeeeeecCCCccccccccCCCCCCCCCC
Q 045553 1 KNALLQLKSAITEDPLGLT-------SNWNPKDTDSCSW---HGVTCDPLSGRVTSLNLSSNLSRTSCSLLSLPPAAGPG 70 (1082)
Q Consensus 1 ~~~l~~~k~~~~~~~~~~~-------~~W~~~~~~~c~w---~gv~C~~~~~~v~~l~l~~~~~~~~~~~~~~~~~~~~~ 70 (1082)
++||++||.++..+.+... ++|+. ++|||.| .||+|+.. |||++|+|++
T Consensus 32 ~~aL~~~~~~~~~~~w~~~~~~~~~~~~W~~-~~~~c~w~~~~GV~C~~~-~~V~~L~L~~------------------- 90 (636)
T 4eco_A 32 YLALKEIWDALNGKNWSQQGFGTQPGANWNF-NKELDMWGAQPGVSLNSN-GRVTGLSLEG------------------- 90 (636)
T ss_dssp HHHHHHHHHHTTGGGCCCCC------CCCCC-SSCGGGTTCCTTEEECTT-CCEEEEECTT-------------------
T ss_pred HHHHHHHHHHcCCCCcccCCcCCccCCCCCC-CCCcccccCCCCeEEcCC-CCEEEEEecC-------------------
Confidence 4799999999875555433 48985 6899999 99999864 8999999986
Q ss_pred CCcccCcCcccccccccCcccCCCCCCccccccccccCCCCCCEEEcccCCC------cc------cCChhhcCCCCCCE
Q 045553 71 GNFSFHFPCLQLHQHDRGNINSNSSDKLSGNLSRAIGDLTQLRVLLLAFNGF------SG------ELPLEIGQLSLLEI 138 (1082)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~l~~~l~~l~~L~~L~L~~n~l------~~------~~p~~~~~l~~L~~ 138 (1082)
+++.|.+|++|++|++|++|+|++|.+ .+ .+|... +.+|+
T Consensus 91 -------------------------~~l~g~lp~~l~~L~~L~~L~Ls~N~~~~~~~~~~~~~~~~~~~~~~--~~~l~- 142 (636)
T 4eco_A 91 -------------------------FGASGRVPDAIGQLTELEVLALGSHGEKVNERLFGPKGISANMSDEQ--KQKMR- 142 (636)
T ss_dssp -------------------------SCCEEEECGGGGGCTTCCEEESCCGGGGGTCCSBSTTSBCTTCCHHH--HHHHH-
T ss_pred -------------------------cccCCcCChHHhcCccceEEECcCCccccCCccccccccccCchHHH--HHHHH-
Confidence 568899999999999999999999976 23 445444 55667
Q ss_pred EeCcCCCCCCCCCccccC-CCCCCeEEccCcccccccCccccCCCCCcEEEcc--cCcccccCCcccccccccccEEEcc
Q 045553 139 LDLSFNSFHGPIPPTLQN-CSSLRLINLSGNQFNGTIPAFFGQSPGFQVVSLS--FNLLSGSVPEEFGDNCVSLEHILLA 215 (1082)
Q Consensus 139 L~Ls~n~l~~~~p~~l~~-l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~--~N~l~~~~p~~~~~~l~~L~~L~L~ 215 (1082)
++++.|.+.+.+|..+.. +..+..+++....+.. .....++.+.+. .|++++ +|..++ .+++|++|+|+
T Consensus 143 l~l~~~~l~~~~~~~~~~~~~~l~~~~l~~~~~~~------~~~~~l~~l~l~~~~n~l~~-ip~~l~-~l~~L~~L~Ls 214 (636)
T 4eco_A 143 MHYQKTFVDYDPREDFSDLIKDCINSDPQQKSIKK------SSRITLKDTQIGQLSNNITF-VSKAVM-RLTKLRQFYMG 214 (636)
T ss_dssp THHHHHHTCCCGGGGSCHHHHHHHHHCTTSCCCCC------CCCCCCCTTTTTCCSCEEEE-ECGGGG-GCTTCCEEEEE
T ss_pred hhHHHhhhccCchhhHHHHHHHHhhcCcccccccc------ccccchhhhhhccccCCCcc-CCHHHh-cccCCCEEECc
Confidence 888888888777766652 2233333333222210 011122222222 345554 555443 35555555555
Q ss_pred cCccCCC-----------------CCcccc--CCCCccEEEccCCcCCCCcCccccCCCCCCEEeCCCCc-Ccc-cCCcc
Q 045553 216 ANSLTGS-----------------IPPSLG--NCTELRSLLLSSNMLQGDIPSSFGQLVNLEVLDLSRNF-LSG-IVPSE 274 (1082)
Q Consensus 216 ~N~l~~~-----------------~~~~~~--~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~-l~~-~~p~~ 274 (1082)
+|++++. +|..++ ++++|++|+|++|++.+.+|..|+++++|++|++++|+ +++ .+|..
T Consensus 215 ~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~~l~~~~lp~~ 294 (636)
T 4eco_A 215 NSPFVAENICEAWENENSEYAQQYKTEDLKWDNLKDLTDVEVYNCPNLTKLPTFLKALPEMQLINVACNRGISGEQLKDD 294 (636)
T ss_dssp SCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEECCTTCSSCCTTTTTCSSCCEEECTTCTTSCHHHHHHH
T ss_pred CCccccccccccccccccchhcccCchhhhhcccCCCCEEEecCCcCCccChHHHhcCCCCCEEECcCCCCCccccchHH
Confidence 5555543 777777 77788888888887777777777778888888888887 776 67777
Q ss_pred ccCC------CCCcEEEeccccCCcccccCCCCCCcccccCCCcccccCCCCCc--cccCCCCCcEEEcCCCcccCCCCc
Q 045553 275 LGMC------KQLKVLVLRNDYGPLYSREHGDLPIQPVVDGGEDYNFFDGGLPD--SITRLPNLRVFWAPNLNLEGIFPQ 346 (1082)
Q Consensus 275 l~~l------~~L~~L~l~~n~~~~~~~~~~~l~~~~~~~~~~~~n~~~~~~p~--~l~~l~~L~~L~l~~n~l~~~~~~ 346 (1082)
++.+ ++|++|++++| .+. .+|. .++.+++|++|++++|.+.+.+|
T Consensus 295 ~~~L~~~~~l~~L~~L~L~~n-------------------------~l~-~ip~~~~l~~l~~L~~L~L~~N~l~g~ip- 347 (636)
T 4eco_A 295 WQALADAPVGEKIQIIYIGYN-------------------------NLK-TFPVETSLQKMKKLGMLECLYNQLEGKLP- 347 (636)
T ss_dssp HHHHHHSGGGGTCCEEECCSS-------------------------CCS-SCCCHHHHTTCTTCCEEECCSCCCEEECC-
T ss_pred HHhhhccccCCCCCEEECCCC-------------------------cCC-ccCchhhhccCCCCCEEeCcCCcCccchh-
Confidence 7665 77888887763 344 5676 78888888888888888887777
Q ss_pred ccccccCCCeEEcCCccccCCCCccccCCCC-CCEEecCCCcCcccCCCCcc---cCcccEEEecCCcceecCCCCCCcc
Q 045553 347 NWELCSKLEMLNLAHNFFTGQIPASLGNCKS-LYFLDLSSNNLTGLLPEEVS---VPCMAVFNVSQNLLSGEIPRISHSE 422 (1082)
Q Consensus 347 ~l~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~-L~~L~Ls~N~l~~~~p~~~~---l~~L~~L~l~~N~l~~~~~~~~~~~ 422 (1082)
.+..+++|++|+|++|+++ .+|..+..+++ |+.|+|++|+++ .+|..+. +++|+.|++++|.+++.+|..-.
T Consensus 348 ~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~-- 423 (636)
T 4eco_A 348 AFGSEIKLASLNLAYNQIT-EIPANFCGFTEQVENLSFAHNKLK-YIPNIFDAKSVSVMSAIDFSYNEIGSVDGKNFD-- 423 (636)
T ss_dssp CCEEEEEESEEECCSSEEE-ECCTTSEEECTTCCEEECCSSCCS-SCCSCCCTTCSSCEEEEECCSSCTTTTTTCSSC--
T ss_pred hhCCCCCCCEEECCCCccc-cccHhhhhhcccCcEEEccCCcCc-ccchhhhhcccCccCEEECcCCcCCCcchhhhc--
Confidence 8888888888888888888 78888888888 888888888888 5555543 34788888888888765553100
Q ss_pred cccccccccccceeeeeecccccccccccCcCCCCCCCCCceeEeeccCCcccCCCCCccccCCCccccccceeeeccCC
Q 045553 423 CSKMSVNWSMSQVDLIGFYTAFFYENALTSCAPFSSPSNGLFILHDFSNNLFTGPVPPFLIDSDSLSSRPYYGFWLSGNS 502 (1082)
Q Consensus 423 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~n~~~g~~p~~~~~~~~l~~~~~~~~~~~~n~ 502 (1082)
+
T Consensus 424 ---------------------------------------------------------~---------------------- 424 (636)
T 4eco_A 424 ---------------------------------------------------------P---------------------- 424 (636)
T ss_dssp ---------------------------------------------------------T----------------------
T ss_pred ---------------------------------------------------------c----------------------
Confidence 0
Q ss_pred CccccCCcccccccCCceeEEEccCCcccccCCccccccCCcccEEEccCCcccccCccccCCCC-------CCCEEEcc
Q 045553 503 LKGNLSTYPFDLCLSLDGLIFDIGNNKLIGEVPSDMGSHCKCMKFLSMAGNEFVGLIPQSFTNFD-------SLRNLNLS 575 (1082)
Q Consensus 503 ~~~~l~~~p~~~~~~~~l~~l~l~~n~l~~~ip~~~~~~~~~L~~L~L~~N~i~~~~~~~~~~l~-------~L~~L~L~ 575 (1082)
.....+...++++|++++|++. .+|..++..+++|++|+|++|+|+.+.+..|.... +|++|+|+
T Consensus 425 -------~~~~~~~~~~L~~L~Ls~N~l~-~lp~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~~~~~~~~l~~L~~L~Ls 496 (636)
T 4eco_A 425 -------LDPTPFKGINVSSINLSNNQIS-KFPKELFSTGSPLSSINLMGNMLTEIPKNSLKDENENFKNTYLLTSIDLR 496 (636)
T ss_dssp -------TCSSCCCCCCEEEEECCSSCCC-SCCTHHHHTTCCCSEEECCSSCCSBCCSSSSEETTEECTTGGGCCEEECC
T ss_pred -------cccccccCCCCCEEECcCCccC-cCCHHHHccCCCCCEEECCCCCCCCcCHHHhccccccccccCCccEEECc
Confidence 0001112345689999999998 89999998889999999999999966555555443 89999999
Q ss_pred CCCCCCCCccccc--CCCCCCEEEcCCCcCCccCchhhhcCcccchhhc------cCcccCCCCCccccCCcccceeccc
Q 045553 576 RNHLQGPLPSYIN--KMEDLKFLSLSLNNFTGAIPWELTQLASLEVLEL------SANSLSGEIPSEFSKLEHLNVLRLD 647 (1082)
Q Consensus 576 ~N~l~~~~p~~~~--~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L------s~N~l~~~~p~~~~~l~~L~~L~L~ 647 (1082)
+|+|+ .+|..+. .+++|+.|+|++|++++ +|..+.++++|++|+| ++|++.+.+|..+..+++|++|+|+
T Consensus 497 ~N~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~~-ip~~~~~l~~L~~L~Ls~N~~ls~N~l~~~~p~~l~~l~~L~~L~Ls 574 (636)
T 4eco_A 497 FNKLT-KLSDDFRATTLPYLVGIDLSYNSFSK-FPTQPLNSSTLKGFGIRNQRDAQGNRTLREWPEGITLCPSLTQLQIG 574 (636)
T ss_dssp SSCCC-BCCGGGSTTTCTTCCEEECCSSCCSS-CCCGGGGCSSCCEEECCSCBCTTCCBCCCCCCTTGGGCSSCCEEECC
T ss_pred CCcCC-ccChhhhhccCCCcCEEECCCCCCCC-cChhhhcCCCCCEEECCCCcccccCcccccChHHHhcCCCCCEEECC
Confidence 99999 6777776 99999999999999997 8999999999999999 5688899999999999999999999
Q ss_pred CcccCCCCCCCCCCCCcccEEeccCCcccc
Q 045553 648 HNNLTGRIPPGFGTRSSLSIFDVSFNNLSG 677 (1082)
Q Consensus 648 ~N~l~~~~p~~~~~l~~L~~l~ls~N~l~~ 677 (1082)
+|+|+ .+|..+. ++|+.|++++|++.+
T Consensus 575 ~N~l~-~ip~~~~--~~L~~L~Ls~N~l~~ 601 (636)
T 4eco_A 575 SNDIR-KVNEKIT--PNISVLDIKDNPNIS 601 (636)
T ss_dssp SSCCC-BCCSCCC--TTCCEEECCSCTTCE
T ss_pred CCcCC-ccCHhHh--CcCCEEECcCCCCcc
Confidence 99994 7888766 899999999999875
No 5
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=100.00 E-value=2.8e-53 Score=540.33 Aligned_cols=514 Identities=20% Similarity=0.160 Sum_probs=388.5
Q ss_pred CCccccccccccCCCCCCEEEcccCCCcccC-ChhhcCCCCCCEEeCcCCCCCCCCCccccCCCCCCeEEccCccccccc
Q 045553 96 DKLSGNLSRAIGDLTQLRVLLLAFNGFSGEL-PLEIGQLSLLEILDLSFNSFHGPIPPTLQNCSSLRLINLSGNQFNGTI 174 (1082)
Q Consensus 96 ~~l~g~l~~~l~~l~~L~~L~L~~n~l~~~~-p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~ 174 (1082)
|.+++..|..|.++++|++|+|++|.+.+.+ |..|+++++|++|+|++|.+++..|..|+++++|++|+|++|.+++.+
T Consensus 34 N~i~~i~~~~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~ 113 (844)
T 3j0a_A 34 NYIRTVTASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIYFLHPDAFQGLFHLFELRLYFCGLSDAV 113 (844)
T ss_dssp CCCCEECSSSCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCCCCEECTTSSCSCSSCCCEECTTCCCSSCC
T ss_pred CcCCccChhHCcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCcCcccCHhHccCCcccCEeeCcCCCCCccc
Confidence 5667777778888888888888888655555 677888888888888888888777888888888888888888888766
Q ss_pred Ccc--ccCCCCCcEEEcccCcccccCCcccccccccccEEEcccCccCCCCCccccCC--CCccEEEccCCcCCCCcCcc
Q 045553 175 PAF--FGQSPGFQVVSLSFNLLSGSVPEEFGDNCVSLEHILLAANSLTGSIPPSLGNC--TELRSLLLSSNMLQGDIPSS 250 (1082)
Q Consensus 175 p~~--~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l--~~L~~L~L~~N~l~~~~p~~ 250 (1082)
|.. |..+++|++|+|++|.+++..+...+..+++|++|+|++|.+++..+..+..+ ++|+.|++++|.+.+..|..
T Consensus 114 ~~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N~i~~~~~~~l~~l~~~~L~~L~L~~n~l~~~~~~~ 193 (844)
T 3j0a_A 114 LKDGYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLVCEHELEPLQGKTLSFFSLAANSLYSRVSVD 193 (844)
T ss_dssp STTCCCSSCSSCCEEEEESCCCCCCCCCGGGGTCSSCCEEEEESSCCCCCCSGGGHHHHHCSSCCCEECCSBSCCCCCCC
T ss_pred ccCccccccCCCCEEECCCCcccccccchhHhhCCCCCEEECCCCcCCeeCHHHcccccCCccceEECCCCccccccccc
Confidence 554 88888888888888888865554444578888888888888887777777776 78888888888888777777
Q ss_pred ccCCCC------CCEEeCCCCcCcccCCccccCC---CCCcEEEeccccCCcccccCCCCCCcccccCCCcccccCCCCC
Q 045553 251 FGQLVN------LEVLDLSRNFLSGIVPSELGMC---KQLKVLVLRNDYGPLYSREHGDLPIQPVVDGGEDYNFFDGGLP 321 (1082)
Q Consensus 251 ~~~l~~------L~~L~Ls~N~l~~~~p~~l~~l---~~L~~L~l~~n~~~~~~~~~~~l~~~~~~~~~~~~n~~~~~~p 321 (1082)
++.+++ |++|++++|.+++..+..+... .+++.|.+..+... .+...+.+.+..+
T Consensus 194 ~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~l~~~~l~~L~l~~~~~~----------------~~~~~~~l~~~~~ 257 (844)
T 3j0a_A 194 WGKCMNPFRNMVLEILDVSGNGWTVDITGNFSNAISKSQAFSLILAHHIMG----------------AGFGFHNIKDPDQ 257 (844)
T ss_dssp CCSSSCTTTTCCBSEEBCSSCCSSTTTTSGGGGTSCSCCBSEEECCSSCCB----------------CSSSCSSSTTGGG
T ss_pred hhhcCCccccCceeEEecCCCcCchhHHHHHHhhcCcccccceeccccccc----------------ccccccccCCCCh
Confidence 666655 8888888888877777666543 56677776643211 1112234444445
Q ss_pred ccccCC--CCCcEEEcCCCcccCCCCcccccccCCCeEEcCCccccCCCCccccCCCCCCEEecCCCcCcccCCCCc-cc
Q 045553 322 DSITRL--PNLRVFWAPNLNLEGIFPQNWELCSKLEMLNLAHNFFTGQIPASLGNCKSLYFLDLSSNNLTGLLPEEV-SV 398 (1082)
Q Consensus 322 ~~l~~l--~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~-~l 398 (1082)
..|.++ ++|+.|++++|.+.+..+..|..+++|+.|+|++|++++..|..|..+++|+.|+|++|++++..|..+ .+
T Consensus 258 ~~f~~l~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l 337 (844)
T 3j0a_A 258 NTFAGLARSSVRHLDLSHGFVFSLNSRVFETLKDLKVLNLAYNKINKIADEAFYGLDNLQVLNLSYNLLGELYSSNFYGL 337 (844)
T ss_dssp TTTTTTTTSCCCEEECTTCCCCEECSCCSSSCCCCCEEEEESCCCCEECTTTTTTCSSCCEEEEESCCCSCCCSCSCSSC
T ss_pred hhhhccccCCccEEECCCCcccccChhhhhcCCCCCEEECCCCcCCCCChHHhcCCCCCCEEECCCCCCCccCHHHhcCC
Confidence 556554 689999999999999888899999999999999999998888889999999999999999988877766 68
Q ss_pred CcccEEEecCCcceecCCCCCCcccccccccccccceeeeeecccccccccccCcCCCCCCCCCceeEeeccCCcccCCC
Q 045553 399 PCMAVFNVSQNLLSGEIPRISHSECSKMSVNWSMSQVDLIGFYTAFFYENALTSCAPFSSPSNGLFILHDFSNNLFTGPV 478 (1082)
Q Consensus 399 ~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~n~~~g~~ 478 (1082)
++|+.|++++|.+.+..+.. ...
T Consensus 338 ~~L~~L~L~~N~i~~~~~~~-~~~-------------------------------------------------------- 360 (844)
T 3j0a_A 338 PKVAYIDLQKNHIAIIQDQT-FKF-------------------------------------------------------- 360 (844)
T ss_dssp TTCCEEECCSCCCCCCCSSC-SCS--------------------------------------------------------
T ss_pred CCCCEEECCCCCCCccChhh-hcC--------------------------------------------------------
Confidence 89999999999886433221 000
Q ss_pred CCccccCCCccccccceeeeccCCCccccCCcccccccCCceeEEEccCCcccccCCccccccCCcccEEEccCCccccc
Q 045553 479 PPFLIDSDSLSSRPYYGFWLSGNSLKGNLSTYPFDLCLSLDGLIFDIGNNKLIGEVPSDMGSHCKCMKFLSMAGNEFVGL 558 (1082)
Q Consensus 479 p~~~~~~~~l~~~~~~~~~~~~n~~~~~l~~~p~~~~~~~~l~~l~l~~n~l~~~ip~~~~~~~~~L~~L~L~~N~i~~~ 558 (1082)
+ ..+..+.+++|.+++ ++ ...+++.|++++|++. .+|.. ..+++.|++++|++++.
T Consensus 361 ------l-----~~L~~L~Ls~N~l~~----i~----~~~~L~~L~l~~N~l~-~l~~~----~~~l~~L~ls~N~l~~l 416 (844)
T 3j0a_A 361 ------L-----EKLQTLDLRDNALTT----IH----FIPSIPDIFLSGNKLV-TLPKI----NLTANLIHLSENRLENL 416 (844)
T ss_dssp ------C-----CCCCEEEEETCCSCC----CS----SCCSCSEEEEESCCCC-CCCCC----CTTCCEEECCSCCCCSS
T ss_pred ------C-----CCCCEEECCCCCCCc----cc----CCCCcchhccCCCCcc-ccccc----ccccceeecccCccccC
Confidence 0 012233444444332 11 1445678888999887 66655 34588999999999875
Q ss_pred Cc-cccCCCCCCCEEEccCCCCCCCCcc-cccCCCCCCEEEcCCCcCC-----ccCchhhhcCcccchhhccCcccCCCC
Q 045553 559 IP-QSFTNFDSLRNLNLSRNHLQGPLPS-YINKMEDLKFLSLSLNNFT-----GAIPWELTQLASLEVLELSANSLSGEI 631 (1082)
Q Consensus 559 ~~-~~~~~l~~L~~L~L~~N~l~~~~p~-~~~~l~~L~~L~Ls~N~l~-----~~~p~~~~~l~~L~~L~Ls~N~l~~~~ 631 (1082)
.. ..+..+++|++|+|++|++++..+. .+..+++|+.|+|++|.++ +..+..|.++++|+.|+|++|+|++.+
T Consensus 417 ~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~ 496 (844)
T 3j0a_A 417 DILYFLLRVPHLQILILNQNRFSSCSGDQTPSENPSLEQLFLGENMLQLAWETELCWDVFEGLSHLQVLYLNHNYLNSLP 496 (844)
T ss_dssp TTHHHHTTCTTCCEEEEESCCCCCCCSSSSSCSCTTCCBCEEESCCCSSSCCSCCCSSCSSCBCCEECCCCCHHHHTTCC
T ss_pred chhhhhhcCCccceeeCCCCcccccccccccccCCccccccCCCCccccccccccchhhhcCcccccEEECCCCcccccC
Confidence 33 2456889999999999999865543 4567889999999999987 445567888999999999999999888
Q ss_pred CccccCCcccceecccCcccCCCCCCCCCCCCcccEEeccCCccccCCCCC-cccccccCCCCCCCCCCCCCCCCCccc
Q 045553 632 PSEFSKLEHLNVLRLDHNNLTGRIPPGFGTRSSLSIFDVSFNNLSGSAPRN-SLIKCENVQGNPNLQLCHTDPSSSEWE 709 (1082)
Q Consensus 632 p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~l~ls~N~l~~~~p~~-~~~~~~~~~~Np~~c~c~~~~~~~~~~ 709 (1082)
|..|..+++|+.|+|++|+|++.+|..+. ++|+.|++++|+|++.+|.. ..+....+.+|||.|+|. ..+...|.
T Consensus 497 ~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~--~~L~~L~Ls~N~l~~~~~~~~~~L~~l~l~~Np~~C~c~-~~~f~~~~ 572 (844)
T 3j0a_A 497 PGVFSHLTALRGLSLNSNRLTVLSHNDLP--ANLEILDISRNQLLAPNPDVFVSLSVLDITHNKFICECE-LSTFINWL 572 (844)
T ss_dssp TTSSSSCCSCSEEEEESCCCSSCCCCCCC--SCCCEEEEEEECCCCCCSCCCSSCCEEEEEEECCCCSSS-CCSHHHHH
T ss_pred hhHccchhhhheeECCCCCCCccChhhhh--ccccEEECCCCcCCCCChhHhCCcCEEEecCCCcccccc-cHHHHHHH
Confidence 88899999999999999999977777665 88999999999999888754 234566788999999997 33444443
No 6
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=100.00 E-value=1.1e-53 Score=533.11 Aligned_cols=513 Identities=18% Similarity=0.235 Sum_probs=365.9
Q ss_pred CHHHHHHHHhcccCCCCCCCCCCCCC----CCC--cee------------eeeEeeCCCCCeeeeecCCCccccccccCC
Q 045553 1 KNALLQLKSAITEDPLGLTSNWNPKD----TDS--CSW------------HGVTCDPLSGRVTSLNLSSNLSRTSCSLLS 62 (1082)
Q Consensus 1 ~~~l~~~k~~~~~~~~~~~~~W~~~~----~~~--c~w------------~gv~C~~~~~~v~~l~l~~~~~~~~~~~~~ 62 (1082)
++||++||+++. +| +|+..+ .+| |.| .||+|+. .+||++|+|++
T Consensus 271 ~~ALl~~k~~l~-~~-----~W~~~~~~~~~~~~~C~W~~~~~~~~w~~~~GV~C~~-~~~V~~L~Ls~----------- 332 (876)
T 4ecn_A 271 YKALKAIWEALD-GK-----NWRYYSGTINNTIHSLNWNFNKELDMWGDQPGVDLDN-NGRVTGLSLAG----------- 332 (876)
T ss_dssp HHHHHHHHHHTT-GG-----GCCCCCSSCSSCCCCCSCCCSSCGGGTTCCTTEEECT-TSCEEEEECTT-----------
T ss_pred HHHHHHHHHHcC-CC-----CCCcCCCcccccCCccccccccccccccCcCceEecC-CCCEEEEECcc-----------
Confidence 479999999995 66 686543 355 999 9999986 69999999986
Q ss_pred CCCCCCCCCCcccCcCcccccccccCcccCCCCCCccccccccccCCCCCCEEEc-ccCCCcccCChhhcCCC-CCCE--
Q 045553 63 LPPAAGPGGNFSFHFPCLQLHQHDRGNINSNSSDKLSGNLSRAIGDLTQLRVLLL-AFNGFSGELPLEIGQLS-LLEI-- 138 (1082)
Q Consensus 63 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~l~~~l~~l~~L~~L~L-~~n~l~~~~p~~~~~l~-~L~~-- 138 (1082)
++++|.+|++|++|++|++|+| ++|.+.|..|-...... .+..
T Consensus 333 ---------------------------------~~L~G~ip~~l~~L~~L~~LdLss~N~lsG~~~~~~~~~~~~l~~~~ 379 (876)
T 4ecn_A 333 ---------------------------------FGAKGRVPDAIGQLTELKVLSFGTHSETVSGRLFGDEELTPDMSEER 379 (876)
T ss_dssp ---------------------------------TCCEEEECGGGGGCTTCCEEESCCTTHHHHTTCBTTBCCCSSCCHHH
T ss_pred ---------------------------------CCCCCcCchHHhccccceEeeecccccccccccccccccccccchhH
Confidence 5788999999999999999999 89988877543211110 0000
Q ss_pred ------------EeC-cCCCCC-----------CCCCccccCCCCCCeEEccC--cccccccCccccCCCCCcEEEcccC
Q 045553 139 ------------LDL-SFNSFH-----------GPIPPTLQNCSSLRLINLSG--NQFNGTIPAFFGQSPGFQVVSLSFN 192 (1082)
Q Consensus 139 ------------L~L-s~n~l~-----------~~~p~~l~~l~~L~~L~Ls~--N~l~~~~p~~~~~l~~L~~L~L~~N 192 (1082)
++. ....+. ...+........++.+.+.. |++++ +|..|+++++|+.|+|++|
T Consensus 380 l~~lr~~~~~~~l~~~~~~~~s~l~~~~l~~~~~~~~i~~~~~l~l~~l~l~~~~N~L~~-IP~~l~~L~~L~~L~Ls~N 458 (876)
T 4ecn_A 380 KHRIRMHYKKMFLDYDQRLNLSDLLQDAINRNPEMKPIKKDSRISLKDTQIGNLTNRITF-ISKAIQRLTKLQIIYFANS 458 (876)
T ss_dssp HHHHHTHHHHHHTCCCGGGGSCHHHHHHHHTCTTSCCCCCCCCCCCCTTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESC
T ss_pred HHHHHHhhhhhhhccCcchhhhHHHHHHhhhCccccccccccccchhhceeccccCcccc-hhHHHhcCCCCCEEECcCC
Confidence 000 000000 01111123334555555655 88887 8889999999999999999
Q ss_pred cccc-cCCcccccccccccEEEcccCccCCCCCcccc--CCCCccEEEccCCcCCCCcCccccCCCCCCEEeCCCCc-Cc
Q 045553 193 LLSG-SVPEEFGDNCVSLEHILLAANSLTGSIPPSLG--NCTELRSLLLSSNMLQGDIPSSFGQLVNLEVLDLSRNF-LS 268 (1082)
Q Consensus 193 ~l~~-~~p~~~~~~l~~L~~L~L~~N~l~~~~~~~~~--~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~-l~ 268 (1082)
++++ .+|..+.. .+.|.+++.+|..++ ++++|++|+|++|.+.+.+|..|+++++|++|+|++|+ ++
T Consensus 459 ~Lsg~~i~~~~~~---------~s~n~~~g~iP~~l~f~~L~~L~~L~Ls~N~l~~~iP~~l~~L~~L~~L~Ls~N~~ls 529 (876)
T 4ecn_A 459 PFTYDNIAVDWED---------ANSDYAKQYENEELSWSNLKDLTDVELYNCPNMTQLPDFLYDLPELQSLNIACNRGIS 529 (876)
T ss_dssp CCCGGGBSSSCSC---------TTSHHHHHHTTSCCCGGGCTTCCEEEEESCTTCCSCCGGGGGCSSCCEEECTTCTTSC
T ss_pred cCCCCcccccccc---------cccccccccCChhhhhccCCCCCEEECcCCCCCccChHHHhCCCCCCEEECcCCCCcc
Confidence 9987 23322211 122455556666665 67777777777777666667667777777777777776 66
Q ss_pred c-cCCccccCCC-------CCcEEEeccccCCcccccCCCCCCcccccCCCcccccCCCCCc--cccCCCCCcEEEcCCC
Q 045553 269 G-IVPSELGMCK-------QLKVLVLRNDYGPLYSREHGDLPIQPVVDGGEDYNFFDGGLPD--SITRLPNLRVFWAPNL 338 (1082)
Q Consensus 269 ~-~~p~~l~~l~-------~L~~L~l~~n~~~~~~~~~~~l~~~~~~~~~~~~n~~~~~~p~--~l~~l~~L~~L~l~~n 338 (1082)
+ .+|..++.++ +|++|++++| .+. .+|. .|+++++|+.|++++|
T Consensus 530 g~~iP~~i~~L~~~~~~l~~L~~L~Ls~N-------------------------~L~-~ip~~~~l~~L~~L~~L~Ls~N 583 (876)
T 4ecn_A 530 AAQLKADWTRLADDEDTGPKIQIFYMGYN-------------------------NLE-EFPASASLQKMVKLGLLDCVHN 583 (876)
T ss_dssp HHHHHHHHHHHHHCTTTTTTCCEEECCSS-------------------------CCC-BCCCHHHHTTCTTCCEEECTTS
T ss_pred cccchHHHHhhhhcccccCCccEEEeeCC-------------------------cCC-ccCChhhhhcCCCCCEEECCCC
Confidence 5 5666555544 7777777663 333 4566 6777777777777777
Q ss_pred cccCCCCcccccccCCCeEEcCCccccCCCCccccCCCC-CCEEecCCCcCcccCCCCcc-c--CcccEEEecCCcceec
Q 045553 339 NLEGIFPQNWELCSKLEMLNLAHNFFTGQIPASLGNCKS-LYFLDLSSNNLTGLLPEEVS-V--PCMAVFNVSQNLLSGE 414 (1082)
Q Consensus 339 ~l~~~~~~~l~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~-L~~L~Ls~N~l~~~~p~~~~-l--~~L~~L~l~~N~l~~~ 414 (1082)
.+. .+| .|..+++|+.|+|++|+++ .+|..+.++++ |+.|+|++|+|+ .+|..+. + ++|+.|++++|+++|.
T Consensus 584 ~l~-~lp-~~~~L~~L~~L~Ls~N~l~-~lp~~l~~l~~~L~~L~Ls~N~L~-~lp~~~~~~~~~~L~~L~Ls~N~l~g~ 659 (876)
T 4ecn_A 584 KVR-HLE-AFGTNVKLTDLKLDYNQIE-EIPEDFCAFTDQVEGLGFSHNKLK-YIPNIFNAKSVYVMGSVDFSYNKIGSE 659 (876)
T ss_dssp CCC-BCC-CCCTTSEESEEECCSSCCS-CCCTTSCEECTTCCEEECCSSCCC-SCCSCCCTTCSSCEEEEECCSSCTTTT
T ss_pred Ccc-cch-hhcCCCcceEEECcCCccc-cchHHHhhccccCCEEECcCCCCC-cCchhhhccccCCCCEEECcCCcCCCc
Confidence 777 445 7777788888888888888 77777888887 888888888887 4555543 2 3488888888887765
Q ss_pred CCCCCCcccccccccccccceeeeeecccccccccccCcCCCCCCCCCceeEeeccCCcccCCCCCccccCCCccccccc
Q 045553 415 IPRISHSECSKMSVNWSMSQVDLIGFYTAFFYENALTSCAPFSSPSNGLFILHDFSNNLFTGPVPPFLIDSDSLSSRPYY 494 (1082)
Q Consensus 415 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~n~~~g~~p~~~~~~~~l~~~~~~ 494 (1082)
+|.+... +
T Consensus 660 ip~l~~~------------------------------------------------------------l------------ 667 (876)
T 4ecn_A 660 GRNISCS------------------------------------------------------------M------------ 667 (876)
T ss_dssp SSSCSSC------------------------------------------------------------T------------
T ss_pred cccchhh------------------------------------------------------------h------------
Confidence 5543100 0
Q ss_pred eeeeccCCCccccCCcccccccCCceeEEEccCCcccccCCccccccCCcccEEEccCCcccccCccccCCC-------C
Q 045553 495 GFWLSGNSLKGNLSTYPFDLCLSLDGLIFDIGNNKLIGEVPSDMGSHCKCMKFLSMAGNEFVGLIPQSFTNF-------D 567 (1082)
Q Consensus 495 ~~~~~~n~~~~~l~~~p~~~~~~~~l~~l~l~~n~l~~~ip~~~~~~~~~L~~L~L~~N~i~~~~~~~~~~l-------~ 567 (1082)
......+|+.|++++|++. .+|..++..+++|+.|+|++|+|+.+.+..|... +
T Consensus 668 ------------------~~~~~~~L~~L~Ls~N~L~-~lp~~~~~~l~~L~~L~Ls~N~L~~ip~~~~~~~~~~l~nl~ 728 (876)
T 4ecn_A 668 ------------------DDYKGINASTVTLSYNEIQ-KFPTELFATGSPISTIILSNNLMTSIPENSLKPKDGNYKNTY 728 (876)
T ss_dssp ------------------TTCCCCCEEEEECCSSCCC-SCCHHHHHTTCCCSEEECCSCCCSCCCTTSSSCTTSCCTTGG
T ss_pred ------------------ccccCCCcCEEEccCCcCC-ccCHHHHccCCCCCEEECCCCcCCccChHHhccccccccccC
Confidence 0011235678899999988 8898888888889999999999985555555433 3
Q ss_pred CCCEEEccCCCCCCCCccccc--CCCCCCEEEcCCCcCCccCchhhhcCcccchhhccC------cccCCCCCccccCCc
Q 045553 568 SLRNLNLSRNHLQGPLPSYIN--KMEDLKFLSLSLNNFTGAIPWELTQLASLEVLELSA------NSLSGEIPSEFSKLE 639 (1082)
Q Consensus 568 ~L~~L~L~~N~l~~~~p~~~~--~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~------N~l~~~~p~~~~~l~ 639 (1082)
+|++|+|++|+|+ .+|..+. .+++|+.|+|++|+|++ +|..+.++++|+.|+|++ |++.+.+|..|..++
T Consensus 729 ~L~~L~Ls~N~L~-~lp~~l~~~~l~~L~~L~Ls~N~L~~-lp~~l~~L~~L~~L~Ls~N~~ls~N~l~~~ip~~l~~L~ 806 (876)
T 4ecn_A 729 LLTTIDLRFNKLT-SLSDDFRATTLPYLSNMDVSYNCFSS-FPTQPLNSSQLKAFGIRHQRDAEGNRILRQWPTGITTCP 806 (876)
T ss_dssp GCCEEECCSSCCC-CCCGGGSTTTCTTCCEEECCSSCCSS-CCCGGGGCTTCCEEECCCCBCTTCCBCCCCCCTTGGGCS
T ss_pred CccEEECCCCCCc-cchHHhhhccCCCcCEEEeCCCCCCc-cchhhhcCCCCCEEECCCCCCcccccccccChHHHhcCC
Confidence 8999999999999 6777776 89999999999999996 788899999999999976 888889999999999
Q ss_pred ccceecccCcccCCCCCCCCCCCCcccEEeccCCccccCCCCC----cccccccCCCCCCCC--CCC
Q 045553 640 HLNVLRLDHNNLTGRIPPGFGTRSSLSIFDVSFNNLSGSAPRN----SLIKCENVQGNPNLQ--LCH 700 (1082)
Q Consensus 640 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~l~ls~N~l~~~~p~~----~~~~~~~~~~Np~~c--~c~ 700 (1082)
+|+.|+|++|+| +.+|..+. ++|+.|||++|++...-+.. .......+.+|++.+ .|.
T Consensus 807 ~L~~L~Ls~N~L-~~Ip~~l~--~~L~~LdLs~N~l~~i~~~~~~~~~~~~~~~L~~n~~~~I~gC~ 870 (876)
T 4ecn_A 807 SLIQLQIGSNDI-RKVDEKLT--PQLYILDIADNPNISIDVTSVCPYIEAGMYVLLYDKTQDIRGCD 870 (876)
T ss_dssp SCCEEECCSSCC-CBCCSCCC--SSSCEEECCSCTTCEEECGGGHHHHHTTCCEEECCTTSEEESCG
T ss_pred CCCEEECCCCCC-CccCHhhc--CCCCEEECCCCCCCccChHHccccccchheeecCCCccccCCCC
Confidence 999999999999 58888765 69999999999987533321 112345567777764 554
No 7
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=100.00 E-value=1.6e-52 Score=515.95 Aligned_cols=485 Identities=19% Similarity=0.153 Sum_probs=343.0
Q ss_pred CCCCCccccccccccCCCCCCEEEcccCCCcccCChhhcCCCCCCEEeCcCCCCCCCCCccccCCCCCCeEEccCccccc
Q 045553 93 NSSDKLSGNLSRAIGDLTQLRVLLLAFNGFSGELPLEIGQLSLLEILDLSFNSFHGPIPPTLQNCSSLRLINLSGNQFNG 172 (1082)
Q Consensus 93 ~~~~~l~g~l~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~ 172 (1082)
.+.+.+.+..|.+|.++++|++|+|++|++++..|..|+++++|++|+|++|.+++..|..|+++++|++|+|++|++++
T Consensus 40 Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~ 119 (606)
T 3t6q_A 40 FSFNVLPTIQNTTFSRLINLTFLDLTRCQIYWIHEDTFQSQHRLDTLVLTANPLIFMAETALSGPKALKHLFFIQTGISS 119 (606)
T ss_dssp CTTCCCSEECTTTSTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCSEECTTTTSSCTTCCEEECTTSCCSC
T ss_pred ccCCccCcCChhHhccCccceEEECCCCccceeChhhccCccccCeeeCCCCcccccChhhhcccccccEeeccccCccc
Confidence 45567777777788888888888888888887778888888888888888888887778888888888888888888887
Q ss_pred ccCccccCCCCCcEEEcccCcccccCCcccccccccccEEEcccCccCCCCCccccCCCCcc--EEEccCCcCCCCcCcc
Q 045553 173 TIPAFFGQSPGFQVVSLSFNLLSGSVPEEFGDNCVSLEHILLAANSLTGSIPPSLGNCTELR--SLLLSSNMLQGDIPSS 250 (1082)
Q Consensus 173 ~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~--~L~L~~N~l~~~~p~~ 250 (1082)
..+..|+.+++|++|+|++|++.+..+..+. .+++|++|++++|++++..+..++.+++|+ .|++++|.+++..|..
T Consensus 120 l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~-~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~l~L~l~~n~l~~~~~~~ 198 (606)
T 3t6q_A 120 IDFIPLHNQKTLESLYLGSNHISSIKLPKGF-PTEKLKVLDFQNNAIHYLSKEDMSSLQQATNLSLNLNGNDIAGIEPGA 198 (606)
T ss_dssp GGGSCCTTCTTCCEEECCSSCCCCCCCCTTC-CCTTCCEEECCSSCCCEECHHHHHTTTTCCSEEEECTTCCCCEECTTT
T ss_pred CCcchhccCCcccEEECCCCcccccCccccc-CCcccCEEEcccCcccccChhhhhhhcccceeEEecCCCccCccChhH
Confidence 6677788888888888888888853323333 378888888888888877777788888888 7888888888766666
Q ss_pred ccCCCCCCEEeCCCCcCc--------------------------ccCCccccCCC--CCcEEEeccccCCcccccCCCCC
Q 045553 251 FGQLVNLEVLDLSRNFLS--------------------------GIVPSELGMCK--QLKVLVLRNDYGPLYSREHGDLP 302 (1082)
Q Consensus 251 ~~~l~~L~~L~Ls~N~l~--------------------------~~~p~~l~~l~--~L~~L~l~~n~~~~~~~~~~~l~ 302 (1082)
|.. .+|++|++++|... ...+..+..+. +|+.|++++
T Consensus 199 ~~~-~~L~~L~l~~~~~~~~~~~~l~~~~l~~l~~~~~~~~~~~~i~~~~~~~l~~~~L~~L~l~~-------------- 263 (606)
T 3t6q_A 199 FDS-AVFQSLNFGGTQNLLVIFKGLKNSTIQSLWLGTFEDMDDEDISPAVFEGLCEMSVESINLQK-------------- 263 (606)
T ss_dssp TTT-CEEEEEECTTCSCHHHHHHHTTTCEEEEEECCCCTTSCCCCCCGGGGGGGGGSEEEEEECTT--------------
T ss_pred hhh-ccccccccCCchhHHHHhhhccccchhheechhhccccccccChhHhchhhcCceeEEEeec--------------
Confidence 544 57788888776511 01111222222 455566554
Q ss_pred CcccccCCCcccccCCCCCccccCCCCCcEEEcCCCcccCCCCcccccccCCCeEEcCCccccCCCCccccCCCCCCEEe
Q 045553 303 IQPVVDGGEDYNFFDGGLPDSITRLPNLRVFWAPNLNLEGIFPQNWELCSKLEMLNLAHNFFTGQIPASLGNCKSLYFLD 382 (1082)
Q Consensus 303 ~~~~~~~~~~~n~~~~~~p~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~ 382 (1082)
|.+.+..+..|..+++|++|++++|.+.. +|..+..+++|++|++++|++++..|..+..+++|+.|+
T Consensus 264 -----------n~l~~~~~~~~~~l~~L~~L~l~~n~l~~-lp~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ 331 (606)
T 3t6q_A 264 -----------HYFFNISSNTFHCFSGLQELDLTATHLSE-LPSGLVGLSTLKKLVLSANKFENLCQISASNFPSLTHLS 331 (606)
T ss_dssp -----------CCCSSCCTTTTTTCTTCSEEECTTSCCSC-CCSSCCSCTTCCEEECTTCCCSBGGGGCGGGCTTCSEEE
T ss_pred -----------CccCccCHHHhccccCCCEEeccCCccCC-CChhhcccccCCEEECccCCcCcCchhhhhccCcCCEEE
Confidence 55666677789999999999999999984 577889999999999999999988888999999999999
Q ss_pred cCCCcCcccCCCC-c-ccCcccEEEecCCcceecCCCCCCcccccccccccccceeeeeecccccccccccCcCCCCCCC
Q 045553 383 LSSNNLTGLLPEE-V-SVPCMAVFNVSQNLLSGEIPRISHSECSKMSVNWSMSQVDLIGFYTAFFYENALTSCAPFSSPS 460 (1082)
Q Consensus 383 Ls~N~l~~~~p~~-~-~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 460 (1082)
+++|.+.+.+|.. + .+++|+.|++++|.+++....
T Consensus 332 l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~------------------------------------------- 368 (606)
T 3t6q_A 332 IKGNTKRLELGTGCLENLENLRELDLSHDDIETSDCC------------------------------------------- 368 (606)
T ss_dssp CCSCSSCCBCCSSTTTTCTTCCEEECCSSCCCEEEES-------------------------------------------
T ss_pred CCCCCcccccchhhhhccCcCCEEECCCCccccccCc-------------------------------------------
Confidence 9999998776654 3 689999999999988642200
Q ss_pred CCceeEeeccCCcccCCCCCccccCCCccccccceeeeccCCCccccCCcccccccCCceeEEEccCCcccccCCccccc
Q 045553 461 NGLFILHDFSNNLFTGPVPPFLIDSDSLSSRPYYGFWLSGNSLKGNLSTYPFDLCLSLDGLIFDIGNNKLIGEVPSDMGS 540 (1082)
Q Consensus 461 ~~~~~~~~l~~n~~~g~~p~~~~~~~~l~~~~~~~~~~~~n~~~~~l~~~p~~~~~~~~l~~l~l~~n~l~~~ip~~~~~ 540 (1082)
|..+....++++|++++|++.+. +...+.
T Consensus 369 --------------------------------------------------~~~~~~l~~L~~L~l~~n~l~~~-~~~~~~ 397 (606)
T 3t6q_A 369 --------------------------------------------------NLQLRNLSHLQSLNLSYNEPLSL-KTEAFK 397 (606)
T ss_dssp --------------------------------------------------TTTTTTCTTCCEEECCSCSCEEE-CTTTTT
T ss_pred --------------------------------------------------chhcccCCCCCEEECCCCcCCcC-CHHHhc
Confidence 00111223345666666666533 333344
Q ss_pred cCCcccEEEccCCcccccCcc-ccCCCCCCCEEEccCCCCCCCCcccccCCCCCCEEEcCCCcCCcc---CchhhhcCcc
Q 045553 541 HCKCMKFLSMAGNEFVGLIPQ-SFTNFDSLRNLNLSRNHLQGPLPSYINKMEDLKFLSLSLNNFTGA---IPWELTQLAS 616 (1082)
Q Consensus 541 ~~~~L~~L~L~~N~i~~~~~~-~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~---~p~~~~~l~~ 616 (1082)
.+++|++|++++|++++..+. .|..+++|++|+|++|.+++..|..|..+++|++|+|++|++++. .+..+..+++
T Consensus 398 ~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~l~~ 477 (606)
T 3t6q_A 398 ECPQLELLDLAFTRLKVKDAQSPFQNLHLLKVLNLSHSLLDISSEQLFDGLPALQHLNLQGNHFPKGNIQKTNSLQTLGR 477 (606)
T ss_dssp TCTTCSEEECTTCCEECCTTCCTTTTCTTCCEEECTTCCCBTTCTTTTTTCTTCCEEECTTCBCGGGEECSSCGGGGCTT
T ss_pred CCccCCeEECCCCcCCCcccchhhhCcccCCEEECCCCccCCcCHHHHhCCCCCCEEECCCCCCCccccccchhhccCCC
Confidence 455666666666666655443 366666666666666666666666666666666666666666642 2245666666
Q ss_pred cchhhccCcccCCCCCccccCCcccceecccCcccCCCCCCCCCCCCcccEEeccCCccccCCCCC----cccccccCCC
Q 045553 617 LEVLELSANSLSGEIPSEFSKLEHLNVLRLDHNNLTGRIPPGFGTRSSLSIFDVSFNNLSGSAPRN----SLIKCENVQG 692 (1082)
Q Consensus 617 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~l~ls~N~l~~~~p~~----~~~~~~~~~~ 692 (1082)
|++|+|++|++++..|..|..+++|+.|+|++|++++..|..|..+++| .|++++|++++..|.. ..+....+.+
T Consensus 478 L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L-~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~ 556 (606)
T 3t6q_A 478 LEILVLSFCDLSSIDQHAFTSLKMMNHVDLSHNRLTSSSIEALSHLKGI-YLNLASNHISIILPSLLPILSQQRTINLRQ 556 (606)
T ss_dssp CCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCGGGGGGGTTCCSC-EEECCSSCCCCCCGGGHHHHHTSSEEECTT
T ss_pred ccEEECCCCccCccChhhhccccCCCEEECCCCccCcCChhHhCccccc-EEECcCCcccccCHhhcccCCCCCEEeCCC
Confidence 6666666666666666666666666666666666666666666666666 6666666666554432 2335556677
Q ss_pred CCCCCCCC
Q 045553 693 NPNLQLCH 700 (1082)
Q Consensus 693 Np~~c~c~ 700 (1082)
|||.|+|.
T Consensus 557 N~~~c~c~ 564 (606)
T 3t6q_A 557 NPLDCTCS 564 (606)
T ss_dssp CCEECSGG
T ss_pred CCccccCC
Confidence 77778876
No 8
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=100.00 E-value=2.3e-52 Score=514.50 Aligned_cols=495 Identities=18% Similarity=0.143 Sum_probs=400.3
Q ss_pred ccccccCCCCCCEEEcccCCCcccCChhhcCCCCCCEEeCcCCCCCCCCCccccCCCCCCeEEccCcccccccCccccCC
Q 045553 102 LSRAIGDLTQLRVLLLAFNGFSGELPLEIGQLSLLEILDLSFNSFHGPIPPTLQNCSSLRLINLSGNQFNGTIPAFFGQS 181 (1082)
Q Consensus 102 l~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l 181 (1082)
+|..+. .++++|+|++|.+++..|..|+++++|++|+|++|.+++..|..|+++++|++|+|++|++++..|..|+++
T Consensus 27 iP~~l~--~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l 104 (606)
T 3t6q_A 27 IPGTLP--NSTECLEFSFNVLPTIQNTTFSRLINLTFLDLTRCQIYWIHEDTFQSQHRLDTLVLTANPLIFMAETALSGP 104 (606)
T ss_dssp CCTTSC--TTCCEEECTTCCCSEECTTTSTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCSEECTTTTSSC
T ss_pred CcCCCC--CcCcEEEccCCccCcCChhHhccCccceEEECCCCccceeChhhccCccccCeeeCCCCcccccChhhhccc
Confidence 444443 278999999999998889999999999999999999998889999999999999999999999899999999
Q ss_pred CCCcEEEcccCcccccCCcccccccccccEEEcccCccCCCCCccccCCCCccEEEccCCcCCCCcCccccCCCCCC--E
Q 045553 182 PGFQVVSLSFNLLSGSVPEEFGDNCVSLEHILLAANSLTGSIPPSLGNCTELRSLLLSSNMLQGDIPSSFGQLVNLE--V 259 (1082)
Q Consensus 182 ~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~--~ 259 (1082)
++|++|+|++|++++..|..+ ..+++|++|++++|++++...+.+..+++|++|++++|.+++..|..|+.+++|+ +
T Consensus 105 ~~L~~L~L~~n~i~~l~~~~~-~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~l~ 183 (606)
T 3t6q_A 105 KALKHLFFIQTGISSIDFIPL-HNQKTLESLYLGSNHISSIKLPKGFPTEKLKVLDFQNNAIHYLSKEDMSSLQQATNLS 183 (606)
T ss_dssp TTCCEEECTTSCCSCGGGSCC-TTCTTCCEEECCSSCCCCCCCCTTCCCTTCCEEECCSSCCCEECHHHHHTTTTCCSEE
T ss_pred ccccEeeccccCcccCCcchh-ccCCcccEEECCCCcccccCcccccCCcccCEEEcccCcccccChhhhhhhcccceeE
Confidence 999999999999995445555 4799999999999999975555666699999999999999988889999999999 9
Q ss_pred EeCCCCcCcccCCccccCCCCCcEEEeccccCCc-ccccCCCCCCcccccCCCcccccCCCCCccccCCC--CCcEEEcC
Q 045553 260 LDLSRNFLSGIVPSELGMCKQLKVLVLRNDYGPL-YSREHGDLPIQPVVDGGEDYNFFDGGLPDSITRLP--NLRVFWAP 336 (1082)
Q Consensus 260 L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~n~~~~-~~~~~~~l~~~~~~~~~~~~n~~~~~~p~~l~~l~--~L~~L~l~ 336 (1082)
|++++|.+++..|..+.. .+|+.|++++|.... ............+..............+..+..+. +|+.|+++
T Consensus 184 L~l~~n~l~~~~~~~~~~-~~L~~L~l~~~~~~~~~~~~l~~~~l~~l~~~~~~~~~~~~i~~~~~~~l~~~~L~~L~l~ 262 (606)
T 3t6q_A 184 LNLNGNDIAGIEPGAFDS-AVFQSLNFGGTQNLLVIFKGLKNSTIQSLWLGTFEDMDDEDISPAVFEGLCEMSVESINLQ 262 (606)
T ss_dssp EECTTCCCCEECTTTTTT-CEEEEEECTTCSCHHHHHHHTTTCEEEEEECCCCTTSCCCCCCGGGGGGGGGSEEEEEECT
T ss_pred EecCCCccCccChhHhhh-ccccccccCCchhHHHHhhhccccchhheechhhccccccccChhHhchhhcCceeEEEee
Confidence 999999999887777654 689999998874110 00000000000010000000111112233344443 78899999
Q ss_pred CCcccCCCCcccccccCCCeEEcCCccccCCCCccccCCCCCCEEecCCCcCcccCCCCc-ccCcccEEEecCCcceecC
Q 045553 337 NLNLEGIFPQNWELCSKLEMLNLAHNFFTGQIPASLGNCKSLYFLDLSSNNLTGLLPEEV-SVPCMAVFNVSQNLLSGEI 415 (1082)
Q Consensus 337 ~n~l~~~~~~~l~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~-~l~~L~~L~l~~N~l~~~~ 415 (1082)
+|.+.++.+..|..+++|++|++++|+++ .+|..+.++++|++|+|++|++++..|..+ .+++|+.|++++|.+.+.+
T Consensus 263 ~n~l~~~~~~~~~~l~~L~~L~l~~n~l~-~lp~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~ 341 (606)
T 3t6q_A 263 KHYFFNISSNTFHCFSGLQELDLTATHLS-ELPSGLVGLSTLKKLVLSANKFENLCQISASNFPSLTHLSIKGNTKRLEL 341 (606)
T ss_dssp TCCCSSCCTTTTTTCTTCSEEECTTSCCS-CCCSSCCSCTTCCEEECTTCCCSBGGGGCGGGCTTCSEEECCSCSSCCBC
T ss_pred cCccCccCHHHhccccCCCEEeccCCccC-CCChhhcccccCCEEECccCCcCcCchhhhhccCcCCEEECCCCCccccc
Confidence 99999988888999999999999999998 788888999999999999999998877665 6788999999888876544
Q ss_pred CCCCCcccccccccccccceeeeeecccccccccccCcCCCCCCCCCceeEeeccCCcccCCCCCccccCCCccccccce
Q 045553 416 PRISHSECSKMSVNWSMSQVDLIGFYTAFFYENALTSCAPFSSPSNGLFILHDFSNNLFTGPVPPFLIDSDSLSSRPYYG 495 (1082)
Q Consensus 416 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~n~~~g~~p~~~~~~~~l~~~~~~~ 495 (1082)
|..
T Consensus 342 ~~~----------------------------------------------------------------------------- 344 (606)
T 3t6q_A 342 GTG----------------------------------------------------------------------------- 344 (606)
T ss_dssp CSS-----------------------------------------------------------------------------
T ss_pred chh-----------------------------------------------------------------------------
Confidence 421
Q ss_pred eeeccCCCccccCCcccccccCCceeEEEccCCcccccCC-ccccccCCcccEEEccCCcccccCccccCCCCCCCEEEc
Q 045553 496 FWLSGNSLKGNLSTYPFDLCLSLDGLIFDIGNNKLIGEVP-SDMGSHCKCMKFLSMAGNEFVGLIPQSFTNFDSLRNLNL 574 (1082)
Q Consensus 496 ~~~~~n~~~~~l~~~p~~~~~~~~l~~l~l~~n~l~~~ip-~~~~~~~~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L 574 (1082)
.+....++++|++++|++.+..+ ...+..+++|++|++++|++.+..|..|..+++|++|+|
T Consensus 345 -----------------~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l 407 (606)
T 3t6q_A 345 -----------------CLENLENLRELDLSHDDIETSDCCNLQLRNLSHLQSLNLSYNEPLSLKTEAFKECPQLELLDL 407 (606)
T ss_dssp -----------------TTTTCTTCCEEECCSSCCCEEEESTTTTTTCTTCCEEECCSCSCEEECTTTTTTCTTCSEEEC
T ss_pred -----------------hhhccCcCCEEECCCCccccccCcchhcccCCCCCEEECCCCcCCcCCHHHhcCCccCCeEEC
Confidence 01123456789999999885431 344567788999999999999999999999999999999
Q ss_pred cCCCCCCCCcc-cccCCCCCCEEEcCCCcCCccCchhhhcCcccchhhccCcccCCC---CCccccCCcccceecccCcc
Q 045553 575 SRNHLQGPLPS-YINKMEDLKFLSLSLNNFTGAIPWELTQLASLEVLELSANSLSGE---IPSEFSKLEHLNVLRLDHNN 650 (1082)
Q Consensus 575 ~~N~l~~~~p~-~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~---~p~~~~~l~~L~~L~L~~N~ 650 (1082)
++|++++..|. .|..+++|+.|++++|++++..|..|..+++|++|+|++|++++. .+..+..+++|++|+|++|+
T Consensus 408 ~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~ 487 (606)
T 3t6q_A 408 AFTRLKVKDAQSPFQNLHLLKVLNLSHSLLDISSEQLFDGLPALQHLNLQGNHFPKGNIQKTNSLQTLGRLEILVLSFCD 487 (606)
T ss_dssp TTCCEECCTTCCTTTTCTTCCEEECTTCCCBTTCTTTTTTCTTCCEEECTTCBCGGGEECSSCGGGGCTTCCEEECTTSC
T ss_pred CCCcCCCcccchhhhCcccCCEEECCCCccCCcCHHHHhCCCCCCEEECCCCCCCccccccchhhccCCCccEEECCCCc
Confidence 99999977654 489999999999999999999999999999999999999999863 34678999999999999999
Q ss_pred cCCCCCCCCCCCCcccEEeccCCccccCCCCC----cccccccCCCCCCC
Q 045553 651 LTGRIPPGFGTRSSLSIFDVSFNNLSGSAPRN----SLIKCENVQGNPNL 696 (1082)
Q Consensus 651 l~~~~p~~~~~l~~L~~l~ls~N~l~~~~p~~----~~~~~~~~~~Np~~ 696 (1082)
+++..|..|..+++|+.|++++|++++..|.. ..+ ..++.+|...
T Consensus 488 l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L-~L~L~~N~l~ 536 (606)
T 3t6q_A 488 LSSIDQHAFTSLKMMNHVDLSHNRLTSSSIEALSHLKGI-YLNLASNHIS 536 (606)
T ss_dssp CCEECTTTTTTCTTCCEEECCSSCCCGGGGGGGTTCCSC-EEECCSSCCC
T ss_pred cCccChhhhccccCCCEEECCCCccCcCChhHhCccccc-EEECcCCccc
Confidence 99999999999999999999999999877643 223 4556777543
No 9
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=100.00 E-value=1e-52 Score=517.78 Aligned_cols=521 Identities=17% Similarity=0.163 Sum_probs=391.5
Q ss_pred CCCCCCccccccccccCCCCCCEEEcccCCCcccCChhhcCCCCCCEEeCcCCCCCCCCCccccCCCCCCeEEccCcccc
Q 045553 92 SNSSDKLSGNLSRAIGDLTQLRVLLLAFNGFSGELPLEIGQLSLLEILDLSFNSFHGPIPPTLQNCSSLRLINLSGNQFN 171 (1082)
Q Consensus 92 ~~~~~~l~g~l~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~ 171 (1082)
+.+.+.+.+..+.+|.++++|++|+|++|++++..|..|+++++|++|+|++|.+++..|..|+++++|++|+|++|+++
T Consensus 38 ~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~ 117 (606)
T 3vq2_A 38 DLSFNPLKILKSYSFSNFSELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNPIQSFSPGSFSGLTSLENLVAVETKLA 117 (606)
T ss_dssp ECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCCCCTTSSTTCTTCCEEECTTSCCC
T ss_pred ECCCCCcCEeChhhccCCccCcEEeCCCCcccccCHHHhhchhhcCEeECCCCcccccChhhcCCcccCCEEEccCCccc
Confidence 34557788877888999999999999999999888888999999999999999999777899999999999999999998
Q ss_pred cccCccccCCCCCcEEEcccCcccc-cCCcccccccccccEEEcccCccCCCCCccccCCCCcc----EEEccCCcCCCC
Q 045553 172 GTIPAFFGQSPGFQVVSLSFNLLSG-SVPEEFGDNCVSLEHILLAANSLTGSIPPSLGNCTELR----SLLLSSNMLQGD 246 (1082)
Q Consensus 172 ~~~p~~~~~l~~L~~L~L~~N~l~~-~~p~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~----~L~L~~N~l~~~ 246 (1082)
+..+..|+++++|++|+|++|++.+ .+|..+. .+++|++|++++|++++..+..++.+++|+ +|++++|.+++.
T Consensus 118 ~~~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~-~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~~l~~L~l~~n~l~~~ 196 (606)
T 3vq2_A 118 SLESFPIGQLITLKKLNVAHNFIHSCKLPAYFS-NLTNLVHVDLSYNYIQTITVNDLQFLRENPQVNLSLDMSLNPIDFI 196 (606)
T ss_dssp CSSSSCCTTCTTCCEEECCSSCCCCCCCCGGGG-TCTTCCEEECCSSCCCEECTTTTHHHHHCTTCCCEEECTTCCCCEE
T ss_pred cccccccCCCCCCCEEeCCCCcccceechHhHh-hcCCCCEEEccCCcceecChhhhhhhhccccccceeeccCCCccee
Confidence 7777889999999999999999985 5677776 689999999999999988888887777665 899999999865
Q ss_pred cCccccCCCCCCEEeCCCCcCc-ccCCccccCCCCCcEEEeccccCCcccccCCCCCCcccccCCCcccccCCCCCcccc
Q 045553 247 IPSSFGQLVNLEVLDLSRNFLS-GIVPSELGMCKQLKVLVLRNDYGPLYSREHGDLPIQPVVDGGEDYNFFDGGLPDSIT 325 (1082)
Q Consensus 247 ~p~~~~~l~~L~~L~Ls~N~l~-~~~p~~l~~l~~L~~L~l~~n~~~~~~~~~~~l~~~~~~~~~~~~n~~~~~~p~~l~ 325 (1082)
.+..+... +|++|++++|.++ +..|..+..+++|+.+.+..+...... ....+....+..+.
T Consensus 197 ~~~~~~~~-~L~~L~L~~n~~~~~~~~~~~~~l~~L~~l~l~~~~~~~~~----------------~l~~~~~~~~~~l~ 259 (606)
T 3vq2_A 197 QDQAFQGI-KLHELTLRGNFNSSNIMKTCLQNLAGLHVHRLILGEFKDER----------------NLEIFEPSIMEGLC 259 (606)
T ss_dssp CTTTTTTC-EEEEEEEESCCSCHHHHHHHHHTTTTCEEEEEEEECCTTSC----------------CCSCCCGGGGTTGG
T ss_pred CcccccCc-eeeeeeccCCccchhHHHHHhccccccccccccccccccCC----------------cccccChHHhhhhh
Confidence 55555544 8999999999886 467888899999998888654322110 00111112222233
Q ss_pred CCCCCcEEEc-CCCcccCCCCcccccccCCCeEEcCCccccCCCCccccCCCCCCEEecCCCcCcccCCCCcccCcccEE
Q 045553 326 RLPNLRVFWA-PNLNLEGIFPQNWELCSKLEMLNLAHNFFTGQIPASLGNCKSLYFLDLSSNNLTGLLPEEVSVPCMAVF 404 (1082)
Q Consensus 326 ~l~~L~~L~l-~~n~l~~~~~~~l~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~l~~L~~L 404 (1082)
.+ +++.+.+ ..+.+.+..|. +..+++|+.|++++|.+. .+| .+..+++|+.|++++|++ +.+|.. .+++|+.|
T Consensus 260 ~l-~l~~l~l~~~~~~~~~~~~-~~~l~~L~~L~l~~~~~~-~l~-~l~~~~~L~~L~l~~n~l-~~lp~~-~l~~L~~L 333 (606)
T 3vq2_A 260 DV-TIDEFRLTYTNDFSDDIVK-FHCLANVSAMSLAGVSIK-YLE-DVPKHFKWQSLSIIRCQL-KQFPTL-DLPFLKSL 333 (606)
T ss_dssp GS-EEEEEEECCCTTCCGGGGS-CGGGTTCSEEEEESCCCC-CCC-CCCTTCCCSEEEEESCCC-SSCCCC-CCSSCCEE
T ss_pred hc-cHhheeccccccccccccc-cccCCCCCEEEecCccch-hhh-hccccccCCEEEcccccC-cccccC-CCCcccee
Confidence 33 4566666 66777777776 888888888888888887 556 778888888888888888 556644 77888888
Q ss_pred EecCCcceecCCCCCCcccccccccccccceeeeeecccccccccccCcCCCCCCCCCceeEeeccCCcccCCCCCcccc
Q 045553 405 NVSQNLLSGEIPRISHSECSKMSVNWSMSQVDLIGFYTAFFYENALTSCAPFSSPSNGLFILHDFSNNLFTGPVPPFLID 484 (1082)
Q Consensus 405 ~l~~N~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~n~~~g~~p~~~~~ 484 (1082)
++++|...+.++.. .+. -+..+++++|.+++.
T Consensus 334 ~l~~n~~~~~~~~~---~l~--------------------------------------~L~~L~ls~n~l~~~------- 365 (606)
T 3vq2_A 334 TLTMNKGSISFKKV---ALP--------------------------------------SLSYLDLSRNALSFS------- 365 (606)
T ss_dssp EEESCSSCEECCCC---CCT--------------------------------------TCCEEECCSSCEEEE-------
T ss_pred eccCCcCccchhhc---cCC--------------------------------------CCCEEECcCCccCCC-------
Confidence 88888654332110 000 011233444444321
Q ss_pred CCCccccccceeeeccCCCccccCCcccccccCCceeEEEccCCcccccCCccccccCCcccEEEccCCcccccCc-ccc
Q 045553 485 SDSLSSRPYYGFWLSGNSLKGNLSTYPFDLCLSLDGLIFDIGNNKLIGEVPSDMGSHCKCMKFLSMAGNEFVGLIP-QSF 563 (1082)
Q Consensus 485 ~~~l~~~~~~~~~~~~n~~~~~l~~~p~~~~~~~~l~~l~l~~n~l~~~ip~~~~~~~~~L~~L~L~~N~i~~~~~-~~~ 563 (1082)
...|..+....++++|++++|++. .+| ..+..+++|++|++++|++.+..| ..|
T Consensus 366 -----------------------~~~~~~~~~~~~L~~L~L~~n~l~-~~~-~~~~~l~~L~~L~l~~n~l~~~~~~~~~ 420 (606)
T 3vq2_A 366 -----------------------GCCSYSDLGTNSLRHLDLSFNGAI-IMS-ANFMGLEELQHLDFQHSTLKRVTEFSAF 420 (606)
T ss_dssp -----------------------EECCHHHHCCSCCCEEECCSCSEE-EEC-CCCTTCTTCCEEECTTSEEESTTTTTTT
T ss_pred -----------------------cchhhhhccCCcccEeECCCCccc-cch-hhccCCCCCCeeECCCCccCCccChhhh
Confidence 011334445566778888888877 466 444567778888888888888777 678
Q ss_pred CCCCCCCEEEccCCCCCCCCcccccCCCCCCEEEcCCCcCCc-cCchhhhcCcccchhhccCcccCCCCCccccCCcccc
Q 045553 564 TNFDSLRNLNLSRNHLQGPLPSYINKMEDLKFLSLSLNNFTG-AIPWELTQLASLEVLELSANSLSGEIPSEFSKLEHLN 642 (1082)
Q Consensus 564 ~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~-~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~ 642 (1082)
..+++|++|++++|.+++..|..|..+++|++|++++|++++ .+|..|..+++|++|+|++|++++..|..|..+++|+
T Consensus 421 ~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~ 500 (606)
T 3vq2_A 421 LSLEKLLYLDISYTNTKIDFDGIFLGLTSLNTLKMAGNSFKDNTLSNVFANTTNLTFLDLSKCQLEQISWGVFDTLHRLQ 500 (606)
T ss_dssp TTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCC
T ss_pred hccccCCEEECcCCCCCccchhhhcCCCCCCEEECCCCcCCCcchHHhhccCCCCCEEECCCCcCCccChhhhcccccCC
Confidence 888888888888888888888888888888888888888887 4788888888888888888888888888888888888
Q ss_pred eecccCcccCCCCCCCCCCCCcccEEeccCCccccCCCCC-----cccccccCCCCCCCCCCCCCCCCCccccc
Q 045553 643 VLRLDHNNLTGRIPPGFGTRSSLSIFDVSFNNLSGSAPRN-----SLIKCENVQGNPNLQLCHTDPSSSEWERQ 711 (1082)
Q Consensus 643 ~L~L~~N~l~~~~p~~~~~l~~L~~l~ls~N~l~~~~p~~-----~~~~~~~~~~Np~~c~c~~~~~~~~~~~~ 711 (1082)
+|+|++|++++.+|..|..+++|+.|++++|+++ .+|.. ..+....+.+|||.|+|.. .+...|.+.
T Consensus 501 ~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~-~~p~~~~~l~~~L~~l~l~~N~~~c~c~~-~~~~~~l~~ 572 (606)
T 3vq2_A 501 LLNMSHNNLLFLDSSHYNQLYSLSTLDCSFNRIE-TSKGILQHFPKSLAFFNLTNNSVACICEH-QKFLQWVKE 572 (606)
T ss_dssp EEECCSSCCSCEEGGGTTTCTTCCEEECTTSCCC-CEESCGGGSCTTCCEEECCSCCCCCSSTT-HHHHTTTTT
T ss_pred EEECCCCcCCCcCHHHccCCCcCCEEECCCCcCc-ccCHhHhhhcccCcEEEccCCCcccCCcc-HHHHHHHHc
Confidence 8888888888888888888888888888888888 45543 1245567889999999973 344455443
No 10
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=100.00 E-value=5.2e-50 Score=500.41 Aligned_cols=552 Identities=21% Similarity=0.186 Sum_probs=401.3
Q ss_pred CCccccccccccCCCCCCEEEcccCCCcccCChhhcCCCCCCEEeCcCCCCCCCCCccccCCCCCCeEEccCcccccccC
Q 045553 96 DKLSGNLSRAIGDLTQLRVLLLAFNGFSGELPLEIGQLSLLEILDLSFNSFHGPIPPTLQNCSSLRLINLSGNQFNGTIP 175 (1082)
Q Consensus 96 ~~l~g~l~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p 175 (1082)
++++ .+|..+. ++|++|+|++|++++..+..|+++++|++|+|++|.+++..|..|+++++|++|+|++|++++..+
T Consensus 14 ~~L~-~ip~~~~--~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~ 90 (680)
T 1ziw_A 14 LKLT-QVPDDLP--TNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELSQLSD 90 (680)
T ss_dssp SCCS-SCCSCSC--TTCSEEECCSSCCCCCCGGGGGGGTTCSEEECCSSCCCCCCTTHHHHCTTCCEEECCSSCCCCCCT
T ss_pred CCcc-ccccccC--CCCcEEECCCCCCCCcCHHHHhCCCcCcEEECCCCccCccCHHHHhcccCcCEEECCCCccCccCh
Confidence 4443 3666554 799999999999998777889999999999999999998889999999999999999999997666
Q ss_pred ccccCCCCCcEEEcccCcccccCCcccccccccccEEEcccCccCCCCCccccCCCCccEEEccCCcCCCCcCcccc--C
Q 045553 176 AFFGQSPGFQVVSLSFNLLSGSVPEEFGDNCVSLEHILLAANSLTGSIPPSLGNCTELRSLLLSSNMLQGDIPSSFG--Q 253 (1082)
Q Consensus 176 ~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~--~ 253 (1082)
..|+++++|++|+|++|++++..|..+ ..+++|++|++++|++++..+..++++++|++|++++|.+++..+..+. .
T Consensus 91 ~~~~~l~~L~~L~L~~n~l~~~~~~~~-~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~ 169 (680)
T 1ziw_A 91 KTFAFCTNLTELHLMSNSIQKIKNNPF-VKQKNLITLDLSHNGLSSTKLGTQVQLENLQELLLSNNKIQALKSEELDIFA 169 (680)
T ss_dssp TTTTTCTTCSEEECCSSCCCCCCSCTT-TTCTTCCEEECCSSCCSCCCCCSSSCCTTCCEEECCSSCCCCBCHHHHGGGT
T ss_pred hhhccCCCCCEEECCCCccCccChhHc-cccCCCCEEECCCCcccccCchhhcccccCCEEEccCCcccccCHHHhhccc
Confidence 789999999999999999984444445 4799999999999999999899999999999999999999987777664 5
Q ss_pred CCCCCEEeCCCCcCcccCCccccCCCCCcEEEeccccCCccccc--CCCCCCcccccCCCcccccCCCCCccccCCCC--
Q 045553 254 LVNLEVLDLSRNFLSGIVPSELGMCKQLKVLVLRNDYGPLYSRE--HGDLPIQPVVDGGEDYNFFDGGLPDSITRLPN-- 329 (1082)
Q Consensus 254 l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~n~~~~~~~~--~~~l~~~~~~~~~~~~n~~~~~~p~~l~~l~~-- 329 (1082)
+++|++|++++|++++..|..+..+++|+.|++.++.+...... ...+....+.......|.+.+..|.+|..++.
T Consensus 170 ~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~~~l~~~~~~~~~~~l~~~~L~~L~L~~n~l~~~~~~~~~~l~~~~ 249 (680)
T 1ziw_A 170 NSSLKKLELSSNQIKEFSPGCFHAIGRLFGLFLNNVQLGPSLTEKLCLELANTSIRNLSLSNSQLSTTSNTTFLGLKWTN 249 (680)
T ss_dssp TCEESEEECTTCCCCCBCTTGGGGSSEECEEECTTCCCHHHHHHHHHHHHTTSCCCEEECTTSCCCEECTTTTGGGGGSC
T ss_pred cccccEEECCCCcccccChhhhhhhhhhhhhhccccccChhhHHHHHHHhhhccccEEEccCCcccccChhHhhccCcCC
Confidence 68999999999999999999999999999999987643210000 00000001111112233444444444444433
Q ss_pred CcEEEcCCCcccCCCCcccccccCCCeEEcCCccccCCCCccccCCCCCCEEecCCCcCccc-----CCC----Cc-ccC
Q 045553 330 LRVFWAPNLNLEGIFPQNWELCSKLEMLNLAHNFFTGQIPASLGNCKSLYFLDLSSNNLTGL-----LPE----EV-SVP 399 (1082)
Q Consensus 330 L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~-----~p~----~~-~l~ 399 (1082)
|+.|++++|.+.++.+..|..+++|++|+|++|++++..|..|.++++|+.|+|++|...+. +|. .+ .++
T Consensus 250 L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~~~~~~~~~~~~lp~i~~~~~~~l~ 329 (680)
T 1ziw_A 250 LTMLDLSYNNLNVVGNDSFAWLPQLEYFFLEYNNIQHLFSHSLHGLFNVRYLNLKRSFTKQSISLASLPKIDDFSFQWLK 329 (680)
T ss_dssp CCEEECTTSCCCEECTTTTTTCTTCCEEECCSCCBSEECTTTTTTCTTCCEEECTTCBCCC------CCEECTTTTTTCT
T ss_pred CCEEECCCCCcCccCcccccCcccccEeeCCCCccCccChhhhcCCCCccEEeccchhhhcccccccccccChhhcccCC
Confidence 55555555555544444455555555555555555544444455555555555554433321 111 11 244
Q ss_pred cccEEEecCCcceecCCCCCCcccccccccccccceeeeeecccccccccccCcCCCCCCCCCceeEeeccCCcccCCCC
Q 045553 400 CMAVFNVSQNLLSGEIPRISHSECSKMSVNWSMSQVDLIGFYTAFFYENALTSCAPFSSPSNGLFILHDFSNNLFTGPVP 479 (1082)
Q Consensus 400 ~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~n~~~g~~p 479 (1082)
+|+.|++++|.+++..+. ....-.-+..+++++|.+++...
T Consensus 330 ~L~~L~l~~n~l~~~~~~---------------------------------------~~~~l~~L~~L~Ls~n~~~~~~l 370 (680)
T 1ziw_A 330 CLEHLNMEDNDIPGIKSN---------------------------------------MFTGLINLKYLSLSNSFTSLRTL 370 (680)
T ss_dssp TCCEEECCSCCBCCCCTT---------------------------------------TTTTCTTCCEEECTTCBSCCCEE
T ss_pred CCCEEECCCCccCCCChh---------------------------------------HhccccCCcEEECCCCchhhhhc
Confidence 455555555544432221 11111224456778777654322
Q ss_pred CccccCCCccccccceeeeccCCCccccCCcccccccCCceeEEEccCCcccccCCccccccCCcccEEEccCCcccccC
Q 045553 480 PFLIDSDSLSSRPYYGFWLSGNSLKGNLSTYPFDLCLSLDGLIFDIGNNKLIGEVPSDMGSHCKCMKFLSMAGNEFVGLI 559 (1082)
Q Consensus 480 ~~~~~~~~l~~~~~~~~~~~~n~~~~~l~~~p~~~~~~~~l~~l~l~~n~l~~~ip~~~~~~~~~L~~L~L~~N~i~~~~ 559 (1082)
+.. ....+....+..+++++|.+++. .|..+....++++|++++|++.+.+|...+..+++|++|++++|++.+..
T Consensus 371 ~~~-~f~~~~~~~L~~L~L~~n~l~~~---~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~ 446 (680)
T 1ziw_A 371 TNE-TFVSLAHSPLHILNLTKNKISKI---ESDAFSWLGHLEVLDLGLNEIGQELTGQEWRGLENIFEIYLSYNKYLQLT 446 (680)
T ss_dssp CTT-TTGGGTTSCCCEEECTTSCCCEE---CTTTTTTCTTCCEEECCSSCCEEECCSGGGTTCTTCCEEECCSCSEEECC
T ss_pred chh-hhcccccCcCceEECCCCCCCeE---ChhhhhCCCCCCEEeCCCCcCccccCcccccCcccccEEecCCCCcceeC
Confidence 110 01112223567788888887753 34566778899999999999999999888899999999999999999999
Q ss_pred ccccCCCCCCCEEEccCCCCC--CCCcccccCCCCCCEEEcCCCcCCccCchhhhcCcccchhhccCcccCCCCC-----
Q 045553 560 PQSFTNFDSLRNLNLSRNHLQ--GPLPSYINKMEDLKFLSLSLNNFTGAIPWELTQLASLEVLELSANSLSGEIP----- 632 (1082)
Q Consensus 560 ~~~~~~l~~L~~L~L~~N~l~--~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p----- 632 (1082)
+..|..+++|+.|++++|.++ +..|..|..+++|++|+|++|++++..|..|.++++|++|+|++|++++..+
T Consensus 447 ~~~~~~~~~L~~L~l~~n~l~~~~~~p~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~ 526 (680)
T 1ziw_A 447 RNSFALVPSLQRLMLRRVALKNVDSSPSPFQPLRNLTILDLSNNNIANINDDMLEGLEKLEILDLQHNNLARLWKHANPG 526 (680)
T ss_dssp TTTTTTCTTCCEEECTTSCCBCTTCSSCTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCGGGGSTTSTT
T ss_pred hhhhhcCcccccchhccccccccccCCcccccCCCCCEEECCCCCCCcCChhhhccccccCEEeCCCCCccccchhhccC
Confidence 999999999999999999987 5788999999999999999999998888889999999999999999986422
Q ss_pred ---ccccCCcccceecccCcccCCCCCCCCCCCCcccEEeccCCccccCCCCC----cccccccCCCCC
Q 045553 633 ---SEFSKLEHLNVLRLDHNNLTGRIPPGFGTRSSLSIFDVSFNNLSGSAPRN----SLIKCENVQGNP 694 (1082)
Q Consensus 633 ---~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~l~ls~N~l~~~~p~~----~~~~~~~~~~Np 694 (1082)
..|..+++|++|+|++|+++...+..|..+++|+.|++++|++++..+.. ..+....+.+|.
T Consensus 527 ~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~L~~N~ 595 (680)
T 1ziw_A 527 GPIYFLKGLSHLHILNLESNGFDEIPVEVFKDLFELKIIDLGLNNLNTLPASVFNNQVSLKSLNLQKNL 595 (680)
T ss_dssp SCCCTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECTTSC
T ss_pred CcchhhcCCCCCCEEECCCCCCCCCCHHHcccccCcceeECCCCCCCcCCHhHhCCCCCCCEEECCCCc
Confidence 34789999999999999999665667999999999999999999543321 223444555553
No 11
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=100.00 E-value=9.1e-49 Score=498.73 Aligned_cols=521 Identities=21% Similarity=0.224 Sum_probs=417.7
Q ss_pred ceeeeeEeeCCCCCeeeeecCCCccccccccCCCCCCCCCCCCcccCcCcccccccccCcccCCCCCCccccc-cccccC
Q 045553 30 CSWHGVTCDPLSGRVTSLNLSSNLSRTSCSLLSLPPAAGPGGNFSFHFPCLQLHQHDRGNINSNSSDKLSGNL-SRAIGD 108 (1082)
Q Consensus 30 c~w~gv~C~~~~~~v~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~l-~~~l~~ 108 (1082)
|.|..|.+ ...+++.|||++|.... +.+.. | ..+......+.+.+...+.+ |.+|.+
T Consensus 14 ~~L~~vP~--lp~~l~~LdLs~N~i~~------i~~~~-----~---------~~l~~L~~LdLs~n~~~~~i~~~~f~~ 71 (844)
T 3j0a_A 14 CNLTQVPQ--VLNTTERLLLSFNYIRT------VTASS-----F---------PFLEQLQLLELGSQYTPLTIDKEAFRN 71 (844)
T ss_dssp CCSSCCCS--SCTTCCEEEEESCCCCE------ECSSS-----C---------SSCCSCSEEEECTTCCCCEECTTTTSS
T ss_pred CCCCCCCC--CCCCcCEEECCCCcCCc------cChhH-----C---------cccccCeEEeCCCCCCccccCHHHhcC
Confidence 56788877 45689999999874432 11111 1 11122223334556667777 678999
Q ss_pred CCCCCEEEcccCCCcccCChhhcCCCCCCEEeCcCCCCCCCCCcc--ccCCCCCCeEEccCcccccccC-ccccCCCCCc
Q 045553 109 LTQLRVLLLAFNGFSGELPLEIGQLSLLEILDLSFNSFHGPIPPT--LQNCSSLRLINLSGNQFNGTIP-AFFGQSPGFQ 185 (1082)
Q Consensus 109 l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~--l~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~ 185 (1082)
+++|++|+|++|.+++..|..|+.+++|++|+|++|.+++.+|.. |+++++|++|+|++|.+++..+ ..|+++++|+
T Consensus 72 L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~ 151 (844)
T 3j0a_A 72 LPNLRILDLGSSKIYFLHPDAFQGLFHLFELRLYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNSLK 151 (844)
T ss_dssp CTTCCEEECTTCCCCEECTTSSCSCSSCCCEECTTCCCSSCCSTTCCCSSCSSCCEEEEESCCCCCCCCCGGGGTCSSCC
T ss_pred CCCCCEEECCCCcCcccCHhHccCCcccCEeeCcCCCCCcccccCccccccCCCCEEECCCCcccccccchhHhhCCCCC
Confidence 999999999999999889999999999999999999999877765 9999999999999999997765 6899999999
Q ss_pred EEEcccCcccccCCccccccc--ccccEEEcccCccCCCCCccccCCCC------ccEEEccCCcCCCCcCccccCC---
Q 045553 186 VVSLSFNLLSGSVPEEFGDNC--VSLEHILLAANSLTGSIPPSLGNCTE------LRSLLLSSNMLQGDIPSSFGQL--- 254 (1082)
Q Consensus 186 ~L~L~~N~l~~~~p~~~~~~l--~~L~~L~L~~N~l~~~~~~~~~~l~~------L~~L~L~~N~l~~~~p~~~~~l--- 254 (1082)
+|+|++|.+++..+..+. .+ ++|+.|++++|.+.+..|..++.+++ |+.|++++|.+++..+..+...
T Consensus 152 ~L~Ls~N~i~~~~~~~l~-~l~~~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~l~~ 230 (844)
T 3j0a_A 152 SIDFSSNQIFLVCEHELE-PLQGKTLSFFSLAANSLYSRVSVDWGKCMNPFRNMVLEILDVSGNGWTVDITGNFSNAISK 230 (844)
T ss_dssp EEEEESSCCCCCCSGGGH-HHHHCSSCCCEECCSBSCCCCCCCCCSSSCTTTTCCBSEEBCSSCCSSTTTTSGGGGTSCS
T ss_pred EEECCCCcCCeeCHHHcc-cccCCccceEECCCCccccccccchhhcCCccccCceeEEecCCCcCchhHHHHHHhhcCc
Confidence 999999999987777765 35 79999999999999998888877766 9999999999998888777643
Q ss_pred CCCCEEeCCC---------CcCcccCCccccCC--CCCcEEEeccccCCcccccCCCCCCcccccCCCcccccCCCCCcc
Q 045553 255 VNLEVLDLSR---------NFLSGIVPSELGMC--KQLKVLVLRNDYGPLYSREHGDLPIQPVVDGGEDYNFFDGGLPDS 323 (1082)
Q Consensus 255 ~~L~~L~Ls~---------N~l~~~~p~~l~~l--~~L~~L~l~~n~~~~~~~~~~~l~~~~~~~~~~~~n~~~~~~p~~ 323 (1082)
++++.|.++. |.+.+..+..|..+ ++|+.|++++| .+.+..|..
T Consensus 231 ~~l~~L~l~~~~~~~~~~~~~l~~~~~~~f~~l~~~~L~~L~Ls~n-------------------------~l~~~~~~~ 285 (844)
T 3j0a_A 231 SQAFSLILAHHIMGAGFGFHNIKDPDQNTFAGLARSSVRHLDLSHG-------------------------FVFSLNSRV 285 (844)
T ss_dssp CCBSEEECCSSCCBCSSSCSSSTTGGGTTTTTTTTSCCCEEECTTC-------------------------CCCEECSCC
T ss_pred ccccceecccccccccccccccCCCChhhhhccccCCccEEECCCC-------------------------cccccChhh
Confidence 5778888773 34444444555554 68999999874 445556778
Q ss_pred ccCCCCCcEEEcCCCcccCCCCcccccccCCCeEEcCCccccCCCCccccCCCCCCEEecCCCcCcccCCCCc-ccCccc
Q 045553 324 ITRLPNLRVFWAPNLNLEGIFPQNWELCSKLEMLNLAHNFFTGQIPASLGNCKSLYFLDLSSNNLTGLLPEEV-SVPCMA 402 (1082)
Q Consensus 324 l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~-~l~~L~ 402 (1082)
|..+++|+.|++++|++.++.+..|..+++|++|+|++|++++..|..|..+++|+.|+|++|++++..+..+ .+++|+
T Consensus 286 ~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~ 365 (844)
T 3j0a_A 286 FETLKDLKVLNLAYNKINKIADEAFYGLDNLQVLNLSYNLLGELYSSNFYGLPKVAYIDLQKNHIAIIQDQTFKFLEKLQ 365 (844)
T ss_dssp SSSCCCCCEEEEESCCCCEECTTTTTTCSSCCEEEEESCCCSCCCSCSCSSCTTCCEEECCSCCCCCCCSSCSCSCCCCC
T ss_pred hhcCCCCCEEECCCCcCCCCChHHhcCCCCCCEEECCCCCCCccCHHHhcCCCCCCEEECCCCCCCccChhhhcCCCCCC
Confidence 8899999999999999999989999999999999999999998888899999999999999999988887766 588999
Q ss_pred EEEecCCcceecCCCCCCcccccccccccccceeeeeecccccccccccCcCCCCCCCCCceeEeeccCCcccCCCCCcc
Q 045553 403 VFNVSQNLLSGEIPRISHSECSKMSVNWSMSQVDLIGFYTAFFYENALTSCAPFSSPSNGLFILHDFSNNLFTGPVPPFL 482 (1082)
Q Consensus 403 ~L~l~~N~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~n~~~g~~p~~~ 482 (1082)
.|++++|.+++. +.. . -+...++++|.++ .+|
T Consensus 366 ~L~Ls~N~l~~i-~~~-----~--------------------------------------~L~~L~l~~N~l~-~l~--- 397 (844)
T 3j0a_A 366 TLDLRDNALTTI-HFI-----P--------------------------------------SIPDIFLSGNKLV-TLP--- 397 (844)
T ss_dssp EEEEETCCSCCC-SSC-----C--------------------------------------SCSEEEEESCCCC-CCC---
T ss_pred EEECCCCCCCcc-cCC-----C--------------------------------------CcchhccCCCCcc-ccc---
Confidence 999999988631 110 0 0011233444443 222
Q ss_pred ccCCCccccccceeeeccCCCccccCCcccccccCCceeEEEccCCcccccCCc-cccccCCcccEEEccCCcccccCcc
Q 045553 483 IDSDSLSSRPYYGFWLSGNSLKGNLSTYPFDLCLSLDGLIFDIGNNKLIGEVPS-DMGSHCKCMKFLSMAGNEFVGLIPQ 561 (1082)
Q Consensus 483 ~~~~~l~~~~~~~~~~~~n~~~~~l~~~p~~~~~~~~l~~l~l~~n~l~~~ip~-~~~~~~~~L~~L~L~~N~i~~~~~~ 561 (1082)
.. ...++.|++++|++.+ ++. .....+++|+.|+|++|++++..+.
T Consensus 398 -----------------------------~~---~~~l~~L~ls~N~l~~-l~~~~~~~~l~~L~~L~Ls~N~l~~~~~~ 444 (844)
T 3j0a_A 398 -----------------------------KI---NLTANLIHLSENRLEN-LDILYFLLRVPHLQILILNQNRFSSCSGD 444 (844)
T ss_dssp -----------------------------CC---CTTCCEEECCSCCCCS-STTHHHHTTCTTCCEEEEESCCCCCCCSS
T ss_pred -----------------------------cc---ccccceeecccCcccc-CchhhhhhcCCccceeeCCCCcccccccc
Confidence 11 2345789999999884 333 2334678899999999999976554
Q ss_pred -ccCCCCCCCEEEccCCCCC-----CCCcccccCCCCCCEEEcCCCcCCccCchhhhcCcccchhhccCcccCCCCCccc
Q 045553 562 -SFTNFDSLRNLNLSRNHLQ-----GPLPSYINKMEDLKFLSLSLNNFTGAIPWELTQLASLEVLELSANSLSGEIPSEF 635 (1082)
Q Consensus 562 -~~~~l~~L~~L~L~~N~l~-----~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~ 635 (1082)
.+..+++|++|+|++|.++ +..+..|..+++|+.|+|++|++++..|..|.++++|+.|+|++|+|++..+..+
T Consensus 445 ~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~ 524 (844)
T 3j0a_A 445 QTPSENPSLEQLFLGENMLQLAWETELCWDVFEGLSHLQVLYLNHNYLNSLPPGVFSHLTALRGLSLNSNRLTVLSHNDL 524 (844)
T ss_dssp SSSCSCTTCCBCEEESCCCSSSCCSCCCSSCSSCBCCEECCCCCHHHHTTCCTTSSSSCCSCSEEEEESCCCSSCCCCCC
T ss_pred cccccCCccccccCCCCccccccccccchhhhcCcccccEEECCCCcccccChhHccchhhhheeECCCCCCCccChhhh
Confidence 5677899999999999997 4555778999999999999999999999999999999999999999998777776
Q ss_pred cCCcccceecccCcccCCCCCCCCCCCCcccEEeccCCccccCCCCCcc
Q 045553 636 SKLEHLNVLRLDHNNLTGRIPPGFGTRSSLSIFDVSFNNLSGSAPRNSL 684 (1082)
Q Consensus 636 ~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~l~ls~N~l~~~~p~~~~ 684 (1082)
. ++|+.|+|++|+|++.+|..| .+|+.|++++|++.|.++...+
T Consensus 525 ~--~~L~~L~Ls~N~l~~~~~~~~---~~L~~l~l~~Np~~C~c~~~~f 568 (844)
T 3j0a_A 525 P--ANLEILDISRNQLLAPNPDVF---VSLSVLDITHNKFICECELSTF 568 (844)
T ss_dssp C--SCCCEEEEEEECCCCCCSCCC---SSCCEEEEEEECCCCSSSCCSH
T ss_pred h--ccccEEECCCCcCCCCChhHh---CCcCEEEecCCCcccccccHHH
Confidence 6 899999999999999998876 4789999999999999886543
No 12
>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*
Probab=100.00 E-value=4.5e-50 Score=441.71 Aligned_cols=257 Identities=24% Similarity=0.405 Sum_probs=217.9
Q ss_pred cCccccceecccCceEEEEEEEc------CCeEEEEEEeecCccccHHHHHHHHHHHhccCCCceeeEeeeeccCCeEEE
Q 045553 801 AGFNVQNCIGSGGFGATYKAEII------PGVVVAVKRLSVGRFQGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFL 874 (1082)
Q Consensus 801 ~~~~~~~~lg~G~~g~Vy~a~~~------~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 874 (1082)
++|.+.+.||+|+||+||+|++. ++..||||+++.......++|.+|++++++++|||||+++++|.+++..++
T Consensus 13 ~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~l 92 (299)
T 4asz_A 13 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIM 92 (299)
T ss_dssp GGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEE
T ss_pred HHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCChHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCEEEE
Confidence 45788899999999999999764 478999999987766677889999999999999999999999999999999
Q ss_pred EEeecCCCCHHHHHhhCC-----------CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEE
Q 045553 875 IYNYLPGGNLEKFIQDRP-----------RRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYL 943 (1082)
Q Consensus 875 V~E~~~~gsL~~~l~~~~-----------~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl 943 (1082)
||||+++|+|.++++... ...++|.++.+|+.|||+||+|||+. +|+||||||+|||+++++.+||
T Consensus 93 V~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDlKp~NILl~~~~~~Ki 169 (299)
T 4asz_A 93 VFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQ---HFVHRDLATRNCLVGENLLVKI 169 (299)
T ss_dssp EEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEE
T ss_pred EEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCccCHhhEEECCCCcEEE
Confidence 999999999999998642 35799999999999999999999999 9999999999999999999999
Q ss_pred eecccceecCCCCCc-cccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCccCCCCCccHHHHHH
Q 045553 944 SDFGLARLLGTSETH-ATTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELIS-DKKALDPSFCSFGNGFNIVAWAS 1021 (1082)
Q Consensus 944 ~DfGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~ellt-g~~p~~~~~~~~~~~~~~~~~~~ 1021 (1082)
+|||+|+........ ......||+.|+|||++.+..|+.++|||||||++|||+| |+.||... ...+.+.
T Consensus 170 ~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~--------~~~~~~~ 241 (299)
T 4asz_A 170 GDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQL--------SNNEVIE 241 (299)
T ss_dssp CCCSCHHHHTGGGCEEETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTS--------CHHHHHH
T ss_pred CCcccceecCCCCceeecCceecChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCC--------CHHHHHH
Confidence 999999876543332 2334569999999999999999999999999999999998 89999632 2333333
Q ss_pred HHHhcCCCccccccccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhhC
Q 045553 1022 MLLLQGRPCEFFTAGLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQLKQIQ 1078 (1082)
Q Consensus 1022 ~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L~~i~ 1078 (1082)
.+. .+... ..|..++.++.+|+.+||+.||++||||.||++.|+++.
T Consensus 242 ~i~-~~~~~---------~~p~~~~~~~~~li~~cl~~dP~~RPs~~~i~~~L~~~~ 288 (299)
T 4asz_A 242 CIT-QGRVL---------QRPRTCPQEVYELMLGCWQREPHMRKNIKGIHTLLQNLA 288 (299)
T ss_dssp HHH-HTCCC---------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred HHH-cCCCC---------CCCccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHH
Confidence 333 23221 234456678999999999999999999999999998864
No 13
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}
Probab=100.00 E-value=1.4e-49 Score=443.99 Aligned_cols=258 Identities=24% Similarity=0.390 Sum_probs=211.8
Q ss_pred cCccccceecccCceEEEEEEEc------CCeEEEEEEeecCccccHHHHHHHHHHHhccCCCceeeEeeeeccCCeEEE
Q 045553 801 AGFNVQNCIGSGGFGATYKAEII------PGVVVAVKRLSVGRFQGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFL 874 (1082)
Q Consensus 801 ~~~~~~~~lg~G~~g~Vy~a~~~------~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 874 (1082)
.+|.+.++||+|+||+||+|++. +++.||||+++.......++|.+|++++++++|||||+++++|.+.+..++
T Consensus 41 ~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~l 120 (329)
T 4aoj_A 41 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLM 120 (329)
T ss_dssp GGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEE
T ss_pred HHeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEE
Confidence 35677889999999999999864 478999999987766677889999999999999999999999999999999
Q ss_pred EEeecCCCCHHHHHhhCC-------------CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcE
Q 045553 875 IYNYLPGGNLEKFIQDRP-------------RRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNA 941 (1082)
Q Consensus 875 V~E~~~~gsL~~~l~~~~-------------~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~ 941 (1082)
||||+++|+|.++++... ...++|.++.+|+.|||+||+|||+. +|+||||||+|||+++++.+
T Consensus 121 V~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDLKp~NILl~~~~~~ 197 (329)
T 4aoj_A 121 VFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGL---HFVHRDLATRNCLVGQGLVV 197 (329)
T ss_dssp EEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEETTTEE
T ss_pred EEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhcC---CeecccccHhhEEECCCCcE
Confidence 999999999999998643 24699999999999999999999999 99999999999999999999
Q ss_pred EEeecccceecCCCCC-ccccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCccCCCCCccHHHH
Q 045553 942 YLSDFGLARLLGTSET-HATTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELIS-DKKALDPSFCSFGNGFNIVAW 1019 (1082)
Q Consensus 942 kl~DfGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~ellt-g~~p~~~~~~~~~~~~~~~~~ 1019 (1082)
||+|||+|+....... .......||+.|||||++.+..++.++|||||||++|||+| |+.||... ...+.
T Consensus 198 Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~--------~~~~~ 269 (329)
T 4aoj_A 198 KIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQL--------SNTEA 269 (329)
T ss_dssp EECCCC----------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSS--------CHHHH
T ss_pred EEcccccceeccCCCcceecCcccccccccChhhhcCCCCCccccccchHHHHHHHHcCCCCCCCCC--------CHHHH
Confidence 9999999987654332 23345679999999999999999999999999999999999 89999632 22333
Q ss_pred HHHHHhcCCCccccccccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhhCC
Q 045553 1020 ASMLLLQGRPCEFFTAGLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQLKQIQP 1079 (1082)
Q Consensus 1020 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L~~i~~ 1079 (1082)
+..+. .+... ..|..++.++.+|+.+||+.||++||||.||+++|+.+..
T Consensus 270 ~~~i~-~g~~~---------~~p~~~~~~~~~li~~cl~~dP~~RPs~~ei~~~L~~l~~ 319 (329)
T 4aoj_A 270 IDCIT-QGREL---------ERPRACPPEVYAIMRGCWQREPQQRHSIKDVHARLQALAQ 319 (329)
T ss_dssp HHHHH-HTCCC---------CCCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHHHHHHHHH
T ss_pred HHHHH-cCCCC---------CCcccccHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHhh
Confidence 33332 22211 2344566789999999999999999999999999998754
No 14
>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A
Probab=100.00 E-value=2.7e-49 Score=437.48 Aligned_cols=257 Identities=25% Similarity=0.388 Sum_probs=215.7
Q ss_pred cCccccceecccCceEEEEEEEc------CCeEEEEEEeecCc-cccHHHHHHHHHHHhccCCCceeeEeeeeccCCeEE
Q 045553 801 AGFNVQNCIGSGGFGATYKAEII------PGVVVAVKRLSVGR-FQGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMF 873 (1082)
Q Consensus 801 ~~~~~~~~lg~G~~g~Vy~a~~~------~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 873 (1082)
..+++.+.||+|+||+||+|++. +++.||||+++... ....++|.+|+.++++++|||||+++|+|.+++..+
T Consensus 26 ~~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~ 105 (308)
T 4gt4_A 26 SAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLS 105 (308)
T ss_dssp GGEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCE
T ss_pred HHCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhCCCCCCCCcceEEEECCEEE
Confidence 34677899999999999999863 46899999996543 344678999999999999999999999999999999
Q ss_pred EEEeecCCCCHHHHHhhCC--------------CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCC
Q 045553 874 LIYNYLPGGNLEKFIQDRP--------------RRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNL 939 (1082)
Q Consensus 874 lV~E~~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~ 939 (1082)
+||||+++|+|.++++.+. ...++|..+.+|+.|||+||+|||+. +||||||||+|||+++++
T Consensus 106 lV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDLK~~NILl~~~~ 182 (308)
T 4gt4_A 106 MIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSH---HVVHKDLATRNVLVYDKL 182 (308)
T ss_dssp EEEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGG
T ss_pred EEEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhC---CCCCCCccccceEECCCC
Confidence 9999999999999997542 24589999999999999999999999 999999999999999999
Q ss_pred cEEEeecccceecCCCCC-ccccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCccCCCCCccHH
Q 045553 940 NAYLSDFGLARLLGTSET-HATTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELIS-DKKALDPSFCSFGNGFNIV 1017 (1082)
Q Consensus 940 ~~kl~DfGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~ellt-g~~p~~~~~~~~~~~~~~~ 1017 (1082)
.+||+|||+|+.....+. .......||+.|+|||++.++.++.++|||||||++|||+| |+.||... ...
T Consensus 183 ~~Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~--------~~~ 254 (308)
T 4gt4_A 183 NVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGY--------SNQ 254 (308)
T ss_dssp CEEECCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTC--------CHH
T ss_pred CEEECCcccceeccCCCceeEecccccCCcccCHHHHhCCCCCccchhhhHHHHHHHHHhCCCCCCCCC--------CHH
Confidence 999999999987644332 23445679999999999999999999999999999999998 88998632 223
Q ss_pred HHHHHHHhcCCCccccccccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhhC
Q 045553 1018 AWASMLLLQGRPCEFFTAGLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQLKQIQ 1078 (1082)
Q Consensus 1018 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L~~i~ 1078 (1082)
+.+..+ ..+... +.|..++.++.+++.+||+.||++||||.||+++|+...
T Consensus 255 ~~~~~i-~~~~~~---------~~p~~~~~~~~~li~~C~~~dP~~RPs~~ei~~~L~a~~ 305 (308)
T 4gt4_A 255 DVVEMI-RNRQVL---------PCPDDCPAWVYALMIECWNEFPSRRPRFKDIHSRLRAWG 305 (308)
T ss_dssp HHHHHH-HTTCCC---------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSC
T ss_pred HHHHHH-HcCCCC---------CCcccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHhcc
Confidence 333333 333221 234566778999999999999999999999999999764
No 15
>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}
Probab=100.00 E-value=4.2e-49 Score=433.61 Aligned_cols=260 Identities=26% Similarity=0.396 Sum_probs=208.5
Q ss_pred cCccccceecccCceEEEEEEEcCCeEEEEEEeecCc--cccHHHHHHHHHHHhccCCCceeeEeeeeccCCeEEEEEee
Q 045553 801 AGFNVQNCIGSGGFGATYKAEIIPGVVVAVKRLSVGR--FQGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFLIYNY 878 (1082)
Q Consensus 801 ~~~~~~~~lg~G~~g~Vy~a~~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~ 878 (1082)
+++++.++||+|+||+||+|++. ..||||+++... ....+.|.+|++++++++|||||++++++.+ +..++||||
T Consensus 36 ~~l~l~~~iG~G~fG~Vy~~~~~--~~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~-~~~~iVmEy 112 (307)
T 3omv_A 36 SEVMLSTRIGSGSFGTVYKGKWH--GDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK-DNLAIVTQW 112 (307)
T ss_dssp TSCCEEEECCCCSSSEEEEEESS--SEEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCEEEEEC
T ss_pred HHeEEeeEEeeCCCcEEEEEEEC--CcEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEC-CeEEEEEEc
Confidence 46788899999999999999865 369999987543 3446789999999999999999999998865 568999999
Q ss_pred cCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCCCC-C
Q 045553 879 LPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGTSE-T 957 (1082)
Q Consensus 879 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~-~ 957 (1082)
+++|+|.++++.. ...++|.++..|+.|||+||+|||+. +||||||||+|||+++++.+||+|||+|+...... .
T Consensus 113 ~~gGsL~~~l~~~-~~~l~~~~~~~i~~qia~gL~yLH~~---~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~~~~ 188 (307)
T 3omv_A 113 CEGSSLYKHLHVQ-ETKFQMFQLIDIARQTAQGMDYLHAK---NIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGS 188 (307)
T ss_dssp CSSCBHHHHHHTS-CCCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCCSSSEEEETTEEEEECCCSSCBC-------
T ss_pred CCCCCHHHHHhhc-CCCCCHHHHHHHHHHHHHHHHHHHHC---CccCCccCHHHEEECCCCcEEEeeccCceecccCCcc
Confidence 9999999999865 45799999999999999999999999 99999999999999999999999999998765332 2
Q ss_pred ccccCcccCCCcccchhccc---CCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCCCccccc
Q 045553 958 HATTDVAGTFGYVAPEYAMT---CRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQGRPCEFFT 1034 (1082)
Q Consensus 958 ~~~~~~~gt~~y~aPE~~~~---~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 1034 (1082)
.......||+.|||||++.+ ..|+.++|||||||++|||+||+.||.... ....+...+..+...
T Consensus 189 ~~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~--------~~~~~~~~~~~~~~~---- 256 (307)
T 3omv_A 189 QQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHIN--------NRDQIIFMVGRGYAS---- 256 (307)
T ss_dssp -----CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCC--------CHHHHHHHHHTTCCC----
T ss_pred eeecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCC--------hHHHHHHHHhcCCCC----
Confidence 33455689999999999964 468999999999999999999999996321 122233333333211
Q ss_pred cccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhhCCC
Q 045553 1035 AGLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQLKQIQPP 1080 (1082)
Q Consensus 1035 ~~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L~~i~~~ 1080 (1082)
+.+ ...+..++.++.+++.+||+.||++||||.||+++|+.++.+
T Consensus 257 p~~-~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~Le~l~~~ 301 (307)
T 3omv_A 257 PDL-SKLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQHS 301 (307)
T ss_dssp CCS-TTSCTTSCHHHHHHHHHHTCSSSTTSCCHHHHHHHHHHHHTT
T ss_pred CCc-ccccccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhcc
Confidence 111 122345567899999999999999999999999999988653
No 16
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=100.00 E-value=2.9e-48 Score=478.03 Aligned_cols=530 Identities=17% Similarity=0.150 Sum_probs=416.4
Q ss_pred CCCceee----eeEeeC---------CCCCeeeeecCCCccccccccCCCCCCCCCCCCcccCcCcccccccccCcccCC
Q 045553 27 TDSCSWH----GVTCDP---------LSGRVTSLNLSSNLSRTSCSLLSLPPAAGPGGNFSFHFPCLQLHQHDRGNINSN 93 (1082)
Q Consensus 27 ~~~c~w~----gv~C~~---------~~~~v~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (1082)
.++|.|. .|.|.. ...+++.|+|++|.... ++..+ +..+......+.
T Consensus 4 ~~~c~~~~~~~~~~c~~~~l~~ip~~~~~~l~~L~Ls~n~l~~------~~~~~--------------~~~l~~L~~L~L 63 (606)
T 3vq2_A 4 LNPCIEVVPNITYQCMDQKLSKVPDDIPSSTKNIDLSFNPLKI------LKSYS--------------FSNFSELQWLDL 63 (606)
T ss_dssp --CCEEEETTTEEECTTSCCSSCCTTSCTTCCEEECTTSCCCE------ECTTT--------------TTTCTTCCEEEC
T ss_pred CCCceecCCCCceEccCCCcccCCCCCCCCcCEEECCCCCcCE------eChhh--------------ccCCccCcEEeC
Confidence 3567663 588853 12578999999874332 12111 111222333445
Q ss_pred CCCCccccccccccCCCCCCEEEcccCCCcccCChhhcCCCCCCEEeCcCCCCCCCCCccccCCCCCCeEEccCccccc-
Q 045553 94 SSDKLSGNLSRAIGDLTQLRVLLLAFNGFSGELPLEIGQLSLLEILDLSFNSFHGPIPPTLQNCSSLRLINLSGNQFNG- 172 (1082)
Q Consensus 94 ~~~~l~g~l~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~- 172 (1082)
+.+.+.+..|.+|.++++|++|+|++|.+++..|..|+++++|++|+|++|.+++..+..++++++|++|+|++|++.+
T Consensus 64 s~n~l~~i~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~ 143 (606)
T 3vq2_A 64 SRCEIETIEDKAWHGLHHLSNLILTGNPIQSFSPGSFSGLTSLENLVAVETKLASLESFPIGQLITLKKLNVAHNFIHSC 143 (606)
T ss_dssp TTCCCCEECTTTTTTCTTCCEEECTTCCCCCCCTTSSTTCTTCCEEECTTSCCCCSSSSCCTTCTTCCEEECCSSCCCCC
T ss_pred CCCcccccCHHHhhchhhcCEeECCCCcccccChhhcCCcccCCEEEccCCccccccccccCCCCCCCEEeCCCCcccce
Confidence 6688998889999999999999999999998889999999999999999999997777889999999999999999986
Q ss_pred ccCccccCCCCCcEEEcccCcccccCCccccccccccc----EEEcccCccCCCCCccccCCCCccEEEccCCcCC-CCc
Q 045553 173 TIPAFFGQSPGFQVVSLSFNLLSGSVPEEFGDNCVSLE----HILLAANSLTGSIPPSLGNCTELRSLLLSSNMLQ-GDI 247 (1082)
Q Consensus 173 ~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~----~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~-~~~ 247 (1082)
.+|..|+++++|++|+|++|++++..|..+. .+.+|+ +|++++|.+++..+..+.. .+|+.|++++|.++ +..
T Consensus 144 ~lp~~~~~l~~L~~L~Ls~n~l~~~~~~~~~-~l~~L~~~l~~L~l~~n~l~~~~~~~~~~-~~L~~L~L~~n~~~~~~~ 221 (606)
T 3vq2_A 144 KLPAYFSNLTNLVHVDLSYNYIQTITVNDLQ-FLRENPQVNLSLDMSLNPIDFIQDQAFQG-IKLHELTLRGNFNSSNIM 221 (606)
T ss_dssp CCCGGGGTCTTCCEEECCSSCCCEECTTTTH-HHHHCTTCCCEEECTTCCCCEECTTTTTT-CEEEEEEEESCCSCHHHH
T ss_pred echHhHhhcCCCCEEEccCCcceecChhhhh-hhhccccccceeeccCCCcceeCcccccC-ceeeeeeccCCccchhHH
Confidence 5799999999999999999999966666554 466554 8999999999665555554 49999999999997 467
Q ss_pred CccccCCCCCCEEeCCCCcCcc------cCCccccCCCC--CcEEEeccccCCcccccCCCCCCcccccCCCcccccCCC
Q 045553 248 PSSFGQLVNLEVLDLSRNFLSG------IVPSELGMCKQ--LKVLVLRNDYGPLYSREHGDLPIQPVVDGGEDYNFFDGG 319 (1082)
Q Consensus 248 p~~~~~l~~L~~L~Ls~N~l~~------~~p~~l~~l~~--L~~L~l~~n~~~~~~~~~~~l~~~~~~~~~~~~n~~~~~ 319 (1082)
|..+..+++|+.+++..+.+.+ ..+..+..+.. ++.+.+.. .+.+.+.
T Consensus 222 ~~~~~~l~~L~~l~l~~~~~~~~~~l~~~~~~~~~~l~~l~l~~l~l~~------------------------~~~~~~~ 277 (606)
T 3vq2_A 222 KTCLQNLAGLHVHRLILGEFKDERNLEIFEPSIMEGLCDVTIDEFRLTY------------------------TNDFSDD 277 (606)
T ss_dssp HHHHHTTTTCEEEEEEEECCTTSCCCSCCCGGGGTTGGGSEEEEEEECC------------------------CTTCCGG
T ss_pred HHHhccccccccccccccccccCCcccccChHHhhhhhhccHhheeccc------------------------ccccccc
Confidence 8889999999999886555432 12223333333 33333321 2556666
Q ss_pred CCccccCCCCCcEEEcCCCcccCCCCcccccccCCCeEEcCCccccCCCCccccCCCCCCEEecCCCcCcccCCCCcccC
Q 045553 320 LPDSITRLPNLRVFWAPNLNLEGIFPQNWELCSKLEMLNLAHNFFTGQIPASLGNCKSLYFLDLSSNNLTGLLPEEVSVP 399 (1082)
Q Consensus 320 ~p~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~l~ 399 (1082)
+|. +..+++|+.|++++|.+.... .+..+++|++|++++|++ +.+| .+ .+++|+.|++++|+..+.. ....++
T Consensus 278 ~~~-~~~l~~L~~L~l~~~~~~~l~--~l~~~~~L~~L~l~~n~l-~~lp-~~-~l~~L~~L~l~~n~~~~~~-~~~~l~ 350 (606)
T 3vq2_A 278 IVK-FHCLANVSAMSLAGVSIKYLE--DVPKHFKWQSLSIIRCQL-KQFP-TL-DLPFLKSLTLTMNKGSISF-KKVALP 350 (606)
T ss_dssp GGS-CGGGTTCSEEEEESCCCCCCC--CCCTTCCCSEEEEESCCC-SSCC-CC-CCSSCCEEEEESCSSCEEC-CCCCCT
T ss_pred ccc-cccCCCCCEEEecCccchhhh--hccccccCCEEEcccccC-cccc-cC-CCCccceeeccCCcCccch-hhccCC
Confidence 666 888888999999998886654 788888899999999998 4777 44 8889999999999666544 344678
Q ss_pred cccEEEecCCcceecC--CCCCCcccccccccccccceeeeeecccccccccccCcCCCCCCCCCceeEeeccCCcccCC
Q 045553 400 CMAVFNVSQNLLSGEI--PRISHSECSKMSVNWSMSQVDLIGFYTAFFYENALTSCAPFSSPSNGLFILHDFSNNLFTGP 477 (1082)
Q Consensus 400 ~L~~L~l~~N~l~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~n~~~g~ 477 (1082)
+|+.|++++|.+++.. +.. +..+
T Consensus 351 ~L~~L~ls~n~l~~~~~~~~~-------------------------------~~~~------------------------ 375 (606)
T 3vq2_A 351 SLSYLDLSRNALSFSGCCSYS-------------------------------DLGT------------------------ 375 (606)
T ss_dssp TCCEEECCSSCEEEEEECCHH-------------------------------HHCC------------------------
T ss_pred CCCEEECcCCccCCCcchhhh-------------------------------hccC------------------------
Confidence 8999999999887531 110 0000
Q ss_pred CCCccccCCCccccccceeeeccCCCccccCCcccccccCCceeEEEccCCcccccCCccccccCCcccEEEccCCcccc
Q 045553 478 VPPFLIDSDSLSSRPYYGFWLSGNSLKGNLSTYPFDLCLSLDGLIFDIGNNKLIGEVPSDMGSHCKCMKFLSMAGNEFVG 557 (1082)
Q Consensus 478 ~p~~~~~~~~l~~~~~~~~~~~~n~~~~~l~~~p~~~~~~~~l~~l~l~~n~l~~~ip~~~~~~~~~L~~L~L~~N~i~~ 557 (1082)
..+..+++++|.++ .+|..+....++++|++++|++.+..|...+..+++|++|++++|++++
T Consensus 376 -------------~~L~~L~L~~n~l~----~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~ 438 (606)
T 3vq2_A 376 -------------NSLRHLDLSFNGAI----IMSANFMGLEELQHLDFQHSTLKRVTEFSAFLSLEKLLYLDISYTNTKI 438 (606)
T ss_dssp -------------SCCCEEECCSCSEE----EECCCCTTCTTCCEEECTTSEEESTTTTTTTTTCTTCCEEECTTSCCEE
T ss_pred -------------CcccEeECCCCccc----cchhhccCCCCCCeeECCCCccCCccChhhhhccccCCEEECcCCCCCc
Confidence 01122333333322 2334455667788999999999977776777888999999999999999
Q ss_pred cCccccCCCCCCCEEEccCCCCCC-CCcccccCCCCCCEEEcCCCcCCccCchhhhcCcccchhhccCcccCCCCCcccc
Q 045553 558 LIPQSFTNFDSLRNLNLSRNHLQG-PLPSYINKMEDLKFLSLSLNNFTGAIPWELTQLASLEVLELSANSLSGEIPSEFS 636 (1082)
Q Consensus 558 ~~~~~~~~l~~L~~L~L~~N~l~~-~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~ 636 (1082)
..|..|..+++|++|+|++|.+++ .+|..|..+++|++|+|++|++++..|..|.++++|++|+|++|++++.+|..|.
T Consensus 439 ~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~ 518 (606)
T 3vq2_A 439 DFDGIFLGLTSLNTLKMAGNSFKDNTLSNVFANTTNLTFLDLSKCQLEQISWGVFDTLHRLQLLNMSHNNLLFLDSSHYN 518 (606)
T ss_dssp CCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCEEGGGTT
T ss_pred cchhhhcCCCCCCEEECCCCcCCCcchHHhhccCCCCCEEECCCCcCCccChhhhcccccCCEEECCCCcCCCcCHHHcc
Confidence 999999999999999999999997 4788999999999999999999999999999999999999999999998899999
Q ss_pred CCcccceecccCcccCCCCCCCCCCCC-cccEEeccCCccccCCCCC
Q 045553 637 KLEHLNVLRLDHNNLTGRIPPGFGTRS-SLSIFDVSFNNLSGSAPRN 682 (1082)
Q Consensus 637 ~l~~L~~L~L~~N~l~~~~p~~~~~l~-~L~~l~ls~N~l~~~~p~~ 682 (1082)
.+++|++|+|++|+|+ .+|..+..++ +|++|++++|++.|.++..
T Consensus 519 ~l~~L~~L~l~~N~l~-~~p~~~~~l~~~L~~l~l~~N~~~c~c~~~ 564 (606)
T 3vq2_A 519 QLYSLSTLDCSFNRIE-TSKGILQHFPKSLAFFNLTNNSVACICEHQ 564 (606)
T ss_dssp TCTTCCEEECTTSCCC-CEESCGGGSCTTCCEEECCSCCCCCSSTTH
T ss_pred CCCcCCEEECCCCcCc-ccCHhHhhhcccCcEEEccCCCcccCCccH
Confidence 9999999999999999 6777798887 6999999999999988864
No 17
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=100.00 E-value=2.3e-47 Score=466.61 Aligned_cols=494 Identities=20% Similarity=0.194 Sum_probs=375.0
Q ss_pred CCCCEEEcccCCCcccCChhhcCCCCCCEEeCcCCCCCCCCCccccCCCCCCeEEccCcccccccCccccCCCCCcEEEc
Q 045553 110 TQLRVLLLAFNGFSGELPLEIGQLSLLEILDLSFNSFHGPIPPTLQNCSSLRLINLSGNQFNGTIPAFFGQSPGFQVVSL 189 (1082)
Q Consensus 110 ~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 189 (1082)
+++++|+|++|++++..+..|..+++|++|+|++|.+++..|..|.++++|++|+|++|++++..|..|+++++|++|++
T Consensus 28 ~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 107 (570)
T 2z63_A 28 FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVA 107 (570)
T ss_dssp SSCCEEECCSCCCCEECTTTTTTCSSCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEEC
T ss_pred ccccEEEccCCccCccChhHhhCCCCceEEECCCCcCCccCcccccCchhCCEEeCcCCcCCccCHhhhcCccccccccc
Confidence 47889999999998777788999999999999999998777788899999999999999998777788999999999999
Q ss_pred ccCcccccCCcccccccccccEEEcccCccCC-CCCccccCCCCccEEEccCCcCCCCcCccccCCCCC----CEEeCCC
Q 045553 190 SFNLLSGSVPEEFGDNCVSLEHILLAANSLTG-SIPPSLGNCTELRSLLLSSNMLQGDIPSSFGQLVNL----EVLDLSR 264 (1082)
Q Consensus 190 ~~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~-~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L----~~L~Ls~ 264 (1082)
++|+++ .++......+++|++|++++|.+++ .+|..++++++|++|++++|++++..+..|+.+++| +.|++++
T Consensus 108 ~~n~l~-~l~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~~~~~L~l~~ 186 (570)
T 2z63_A 108 VETNLA-SLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSL 186 (570)
T ss_dssp TTSCCC-CSTTCSCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECTTSCCCEECGGGGHHHHTCTTCCCEEECTT
T ss_pred cccccc-cCCCccccccccccEEecCCCccceecChhhhcccCCCCEEeCcCCccceecHHHccchhccchhhhhcccCC
Confidence 999988 4554334478899999999999886 468888999999999999999987777888888888 8899999
Q ss_pred CcCcccCCccccCCCCCcEEEeccccCCc--ccccCCCCCCcc---cccC-CCcccccCCCCCccccCCC--CCcEEEcC
Q 045553 265 NFLSGIVPSELGMCKQLKVLVLRNDYGPL--YSREHGDLPIQP---VVDG-GEDYNFFDGGLPDSITRLP--NLRVFWAP 336 (1082)
Q Consensus 265 N~l~~~~p~~l~~l~~L~~L~l~~n~~~~--~~~~~~~l~~~~---~~~~-~~~~n~~~~~~p~~l~~l~--~L~~L~l~ 336 (1082)
|.+++..|..+..+ +|+.|++++|.... .+.....+.... +... ......+.......+..+. .++.+.++
T Consensus 187 n~l~~~~~~~~~~~-~L~~L~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~l~~l~l~~l~l~ 265 (570)
T 2z63_A 187 NPMNFIQPGAFKEI-RLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLA 265 (570)
T ss_dssp CCCCEECTTTTTTC-EEEEEEEESCCSCTTHHHHHHHTTTTCEEEEEEEEECCCCSSCEECCTTTTGGGGGSEEEEEEEE
T ss_pred CCceecCHHHhccC-cceeEecccccccccchhhhhcCccccceeeeccccccCchhhhhcchhhhccccccchhhhhhh
Confidence 99988877777766 78899888874221 000000000000 0000 0000111111122233333 25667777
Q ss_pred CC-cccCCCCcccccccCCCeEEcCCccccCCCCccccCCCCCCEEecCCCcCcccCCCCcccCcccEEEecCCcceecC
Q 045553 337 NL-NLEGIFPQNWELCSKLEMLNLAHNFFTGQIPASLGNCKSLYFLDLSSNNLTGLLPEEVSVPCMAVFNVSQNLLSGEI 415 (1082)
Q Consensus 337 ~n-~l~~~~~~~l~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~l~~L~~L~l~~N~l~~~~ 415 (1082)
++ .+.+..+..+..+++|+.|++++|.++ .+|..+..+ +|+.|++++|.+.. +|. ..+++|+.|++++|.+.+.+
T Consensus 266 ~~~~~~~~~~~~~~~l~~L~~L~l~~~~l~-~l~~~~~~~-~L~~L~l~~n~~~~-l~~-~~l~~L~~L~l~~n~~~~~~ 341 (570)
T 2z63_A 266 YLDYYLDDIIDLFNCLTNVSSFSLVSVTIE-RVKDFSYNF-GWQHLELVNCKFGQ-FPT-LKLKSLKRLTFTSNKGGNAF 341 (570)
T ss_dssp ETTEEESCSTTTTGGGTTCSEEEEESCEEC-SCCBCCSCC-CCSEEEEESCBCSS-CCB-CBCSSCCEEEEESCBSCCBC
T ss_pred cchhhhhhchhhhcCcCcccEEEecCccch-hhhhhhccC-CccEEeeccCcccc-cCc-ccccccCEEeCcCCcccccc
Confidence 77 777888888999999999999999998 688888888 99999999999984 443 46788999999999876544
Q ss_pred CCCCCcccccccccccccceeeeeecccccccccccCcCCCCCCCCCceeEeeccCCcccCCCCCccccCCCccccccce
Q 045553 416 PRISHSECSKMSVNWSMSQVDLIGFYTAFFYENALTSCAPFSSPSNGLFILHDFSNNLFTGPVPPFLIDSDSLSSRPYYG 495 (1082)
Q Consensus 416 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~n~~~g~~p~~~~~~~~l~~~~~~~ 495 (1082)
+.. .+. -+..+++++|.+++.
T Consensus 342 ~~~---~~~--------------------------------------~L~~L~l~~n~l~~~------------------ 362 (570)
T 2z63_A 342 SEV---DLP--------------------------------------SLEFLDLSRNGLSFK------------------ 362 (570)
T ss_dssp CCC---BCT--------------------------------------TCCEEECCSSCCBEE------------------
T ss_pred ccc---cCC--------------------------------------CCCEEeCcCCccCcc------------------
Confidence 320 000 011233344433311
Q ss_pred eeeccCCCccccCCcccccccCCceeEEEccCCcccccCCccccccCCcccEEEccCCcccccCc-cccCCCCCCCEEEc
Q 045553 496 FWLSGNSLKGNLSTYPFDLCLSLDGLIFDIGNNKLIGEVPSDMGSHCKCMKFLSMAGNEFVGLIP-QSFTNFDSLRNLNL 574 (1082)
Q Consensus 496 ~~~~~n~~~~~l~~~p~~~~~~~~l~~l~l~~n~l~~~ip~~~~~~~~~L~~L~L~~N~i~~~~~-~~~~~l~~L~~L~L 574 (1082)
...|..+....++++|++++|++. .+|.. +..+++|++|++++|++.+..+ ..|..+++|++|+|
T Consensus 363 ------------~~~~~~~~~~~~L~~L~l~~n~l~-~~~~~-~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l 428 (570)
T 2z63_A 363 ------------GCCSQSDFGTTSLKYLDLSFNGVI-TMSSN-FLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDI 428 (570)
T ss_dssp ------------EEEEHHHHTCSCCCEEECCSCSEE-EEEEE-EETCTTCCEEECTTSEEESCTTSCTTTTCTTCCEEEC
T ss_pred ------------ccccccccccCccCEEECCCCccc-ccccc-ccccCCCCEEEccCCccccccchhhhhcCCCCCEEeC
Confidence 011334445667789999999988 45555 6677889999999999988766 57889999999999
Q ss_pred cCCCCCCCCcccccCCCCCCEEEcCCCcCC-ccCchhhhcCcccchhhccCcccCCCCCccccCCcccceecccCcccCC
Q 045553 575 SRNHLQGPLPSYINKMEDLKFLSLSLNNFT-GAIPWELTQLASLEVLELSANSLSGEIPSEFSKLEHLNVLRLDHNNLTG 653 (1082)
Q Consensus 575 ~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~-~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~ 653 (1082)
++|.+.+..|..|..+++|++|+|++|+++ +.+|..|..+++|++|+|++|++++..|..|..+++|++|+|++|++++
T Consensus 429 ~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~ 508 (570)
T 2z63_A 429 SHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMASNQLKS 508 (570)
T ss_dssp TTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSC
T ss_pred cCCcccccchhhhhcCCcCcEEECcCCcCccccchhhhhcccCCCEEECCCCccccCChhhhhcccCCCEEeCCCCcCCC
Confidence 999999888888999999999999999997 5788889999999999999999998888899999999999999999998
Q ss_pred CCCCCCCCCCcccEEeccCCccccCCCCC
Q 045553 654 RIPPGFGTRSSLSIFDVSFNNLSGSAPRN 682 (1082)
Q Consensus 654 ~~p~~~~~l~~L~~l~ls~N~l~~~~p~~ 682 (1082)
.+|..|..+++|+.|++++|+++|.+|..
T Consensus 509 ~~~~~~~~l~~L~~L~l~~N~~~~~~~~~ 537 (570)
T 2z63_A 509 VPDGIFDRLTSLQKIWLHTNPWDCSCPRI 537 (570)
T ss_dssp CCTTTTTTCTTCCEEECCSSCBCCCTTTT
T ss_pred CCHHHhhcccCCcEEEecCCcccCCCcch
Confidence 88888899999999999998888777754
No 18
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=100.00 E-value=2.9e-48 Score=432.76 Aligned_cols=251 Identities=23% Similarity=0.360 Sum_probs=209.4
Q ss_pred cCccccceecccCceEEEEEEE-cCCeEEEEEEeecCc--cccHHHHHHHHHHHhccCCCceeeEeeeeccCCeEEEEEe
Q 045553 801 AGFNVQNCIGSGGFGATYKAEI-IPGVVVAVKRLSVGR--FQGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFLIYN 877 (1082)
Q Consensus 801 ~~~~~~~~lg~G~~g~Vy~a~~-~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~E 877 (1082)
++|++.+.||+|+||+||+|+. .+|+.||||++.... ....+.+.+|++++++++|||||++++++.+++..|+|||
T Consensus 24 e~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~yiVmE 103 (350)
T 4b9d_A 24 EKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVMD 103 (350)
T ss_dssp CCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred cceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEe
Confidence 5899999999999999999965 469999999997653 2345779999999999999999999999999999999999
Q ss_pred ecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCCCCC
Q 045553 878 YLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGTSET 957 (1082)
Q Consensus 878 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~ 957 (1082)
|++||+|.+++...+...+++..++.|+.||+.||+|||+. +|+||||||+|||+++++.+||+|||+|+.+....
T Consensus 104 y~~gg~L~~~i~~~~~~~~~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~- 179 (350)
T 4b9d_A 104 YCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDR---KILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTV- 179 (350)
T ss_dssp CCTTCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHT---TCEETTCCGGGEEECTTCCEEECSTTEESCCCHHH-
T ss_pred CCCCCcHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCCHHHEEECCCCCEEEcccccceeecCCc-
Confidence 99999999999877667789999999999999999999999 99999999999999999999999999998764321
Q ss_pred ccccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCCCcccccccc
Q 045553 958 HATTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQGRPCEFFTAGL 1037 (1082)
Q Consensus 958 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 1037 (1082)
......+||+.|+|||++.+..|+.++||||+||++|||++|+.||.. .+..+.+..+.... ..
T Consensus 180 ~~~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~--------~~~~~~~~~i~~~~-~~------- 243 (350)
T 4b9d_A 180 ELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEA--------GSMKNLVLKIISGS-FP------- 243 (350)
T ss_dssp HHHHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCC--------SSHHHHHHHHHHTC-CC-------
T ss_pred ccccccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCC--------cCHHHHHHHHHcCC-CC-------
Confidence 123446799999999999999999999999999999999999999963 23444444444332 11
Q ss_pred CCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 045553 1038 WDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQ 1073 (1082)
Q Consensus 1038 ~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~ 1073 (1082)
..+...+.++.+|+.+||+.||++|||+.|++++
T Consensus 244 --~~~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~h 277 (350)
T 4b9d_A 244 --PVSLHYSYDLRSLVSQLFKRNPRDRPSVNSILEK 277 (350)
T ss_dssp --CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred --CCCccCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 1223445689999999999999999999999863
No 19
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=100.00 E-value=1.8e-47 Score=465.16 Aligned_cols=152 Identities=24% Similarity=0.260 Sum_probs=98.3
Q ss_pred CceeEEEccCCcccccCCc--cccccCCcccEEEccCCcccccCccccCCCCCCCEEEccCCCCCCCCcccccCCCCCCE
Q 045553 518 LDGLIFDIGNNKLIGEVPS--DMGSHCKCMKFLSMAGNEFVGLIPQSFTNFDSLRNLNLSRNHLQGPLPSYINKMEDLKF 595 (1082)
Q Consensus 518 ~~l~~l~l~~n~l~~~ip~--~~~~~~~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~ 595 (1082)
.++++|++++|++. .+|. ..+..+++|++|++++|+|+ .+|..+..+++|++|+|++|+|++ +|..+. ++|++
T Consensus 361 ~~L~~L~Ls~N~l~-~~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~~~~L~~L~Ls~N~l~~-l~~~~~--~~L~~ 435 (549)
T 2z81_A 361 PSLQTLVLSQNHLR-SMQKTGEILLTLKNLTSLDISRNTFH-PMPDSCQWPEKMRFLNLSSTGIRV-VKTCIP--QTLEV 435 (549)
T ss_dssp TTCCEEECTTSCCC-CHHHHHHHGGGCTTCCEEECTTCCCC-CCCSCCCCCTTCCEEECTTSCCSC-CCTTSC--TTCSE
T ss_pred ccCcEEEccCCccc-ccccchhhhhcCCCCCEEECCCCCCc-cCChhhcccccccEEECCCCCccc-ccchhc--CCceE
Confidence 34566777777665 3332 34555666777777777777 345666677777777777777763 333332 46777
Q ss_pred EEcCCCcCCccCchhhhcCcccchhhccCcccCCCCCccccCCcccceecccCcccCCCCCCCCCCCCcccEEeccCCcc
Q 045553 596 LSLSLNNFTGAIPWELTQLASLEVLELSANSLSGEIPSEFSKLEHLNVLRLDHNNLTGRIPPGFGTRSSLSIFDVSFNNL 675 (1082)
Q Consensus 596 L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~l~ls~N~l 675 (1082)
|+|++|++++.+ ..+++|++|+|++|+|+ .+|. ...+++|++|+|++|+|++.+|..|..+++|+.|++++|++
T Consensus 436 L~Ls~N~l~~~~----~~l~~L~~L~Ls~N~l~-~ip~-~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~~ 509 (549)
T 2z81_A 436 LDVSNNNLDSFS----LFLPRLQELYISRNKLK-TLPD-ASLFPVLLVMKISRNQLKSVPDGIFDRLTSLQKIWLHTNPW 509 (549)
T ss_dssp EECCSSCCSCCC----CCCTTCCEEECCSSCCS-SCCC-GGGCTTCCEEECCSSCCCCCCTTGGGGCTTCCEEECCSSCB
T ss_pred EECCCCChhhhc----ccCChhcEEECCCCccC-cCCC-cccCccCCEEecCCCccCCcCHHHHhcCcccCEEEecCCCc
Confidence 777777777532 35667777777777776 4554 35667777777777777766666677777777777766666
Q ss_pred ccCCC
Q 045553 676 SGSAP 680 (1082)
Q Consensus 676 ~~~~p 680 (1082)
+|.+|
T Consensus 510 ~~~~~ 514 (549)
T 2z81_A 510 DCSCP 514 (549)
T ss_dssp CCCHH
T ss_pred cCCCc
Confidence 55444
No 20
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=100.00 E-value=2e-47 Score=425.21 Aligned_cols=250 Identities=22% Similarity=0.329 Sum_probs=213.5
Q ss_pred cCccccceecccCceEEEEEEEc-CCeEEEEEEeecCccccHHHHHHHHHHHhccCCCceeeEeeeeccCCeEEEEEeec
Q 045553 801 AGFNVQNCIGSGGFGATYKAEII-PGVVVAVKRLSVGRFQGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFLIYNYL 879 (1082)
Q Consensus 801 ~~~~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~~ 879 (1082)
..|++.++||+|+||+||+|... +|+.||||++........+.+.+|++++++++|||||++++++.+++..|+||||+
T Consensus 74 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~ 153 (346)
T 4fih_A 74 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFL 153 (346)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCSSGGGGHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEECCC
T ss_pred HhcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeCC
Confidence 46889999999999999999764 69999999998766566677899999999999999999999999999999999999
Q ss_pred CCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCCCCCcc
Q 045553 880 PGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGTSETHA 959 (1082)
Q Consensus 880 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~ 959 (1082)
++|+|.++++.. .+++..+..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+|+.+..... .
T Consensus 154 ~gg~L~~~l~~~---~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~-~ 226 (346)
T 4fih_A 154 EGGALTDIVTHT---RMNEEQIAAVCLAVLQALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVP-R 226 (346)
T ss_dssp TTEEHHHHHHHS---CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEECCSSSC-C
T ss_pred CCCcHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHHEEECCCCCEEEecCcCceecCCCCC-c
Confidence 999999999863 599999999999999999999999 999999999999999999999999999998754332 3
Q ss_pred ccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCCCccccccccCC
Q 045553 960 TTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQGRPCEFFTAGLWD 1039 (1082)
Q Consensus 960 ~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 1039 (1082)
....+||+.|+|||++.+..|+.++||||+||++|||++|+.||... +..+.+..+.. +.....
T Consensus 227 ~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~--------~~~~~~~~i~~-~~~~~~------- 290 (346)
T 4fih_A 227 RKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNE--------PPLKAMKMIRD-NLPPRL------- 290 (346)
T ss_dssp BCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTS--------CHHHHHHHHHH-SSCCCC-------
T ss_pred ccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCc--------CHHHHHHHHHc-CCCCCC-------
Confidence 45578999999999999999999999999999999999999999632 22333333322 211111
Q ss_pred CCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 045553 1040 CGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQ 1073 (1082)
Q Consensus 1040 ~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~ 1073 (1082)
..+...+.++.+|+.+|++.||++|||+.|++++
T Consensus 291 ~~~~~~s~~~~dli~~~L~~dP~~R~ta~e~l~H 324 (346)
T 4fih_A 291 KNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKH 324 (346)
T ss_dssp SCGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred CccccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 1223456789999999999999999999999874
No 21
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=100.00 E-value=2.5e-46 Score=457.34 Aligned_cols=493 Identities=19% Similarity=0.225 Sum_probs=394.0
Q ss_pred CCEEEcccCCCcccCChhhcCCCCCCEEeCcCCCCCCCCCccccCCCCCCeEEccCcccccccCccccCCCCCcEEEccc
Q 045553 112 LRVLLLAFNGFSGELPLEIGQLSLLEILDLSFNSFHGPIPPTLQNCSSLRLINLSGNQFNGTIPAFFGQSPGFQVVSLSF 191 (1082)
Q Consensus 112 L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~ 191 (1082)
.+.++-++.+++ .+|..+. +++++|+|++|.+++..+..|.++++|++|+|++|++++..|..|.++++|++|+|++
T Consensus 9 ~~~~~c~~~~l~-~ip~~l~--~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~ 85 (570)
T 2z63_A 9 NITYQCMELNFY-KIPDNLP--FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTG 85 (570)
T ss_dssp TTEEECCSSCCS-SCCSSSC--SSCCEEECCSCCCCEECTTTTTTCSSCCEEECTTCCCCEECTTTTTTCTTCCEEECTT
T ss_pred CcEEEeCCCCcc-ccCCCcc--ccccEEEccCCccCccChhHhhCCCCceEEECCCCcCCccCcccccCchhCCEEeCcC
Confidence 356777777787 6777553 6899999999999988888999999999999999999988889999999999999999
Q ss_pred CcccccCCcccccccccccEEEcccCccCCCCCccccCCCCccEEEccCCcCCC-CcCccccCCCCCCEEeCCCCcCccc
Q 045553 192 NLLSGSVPEEFGDNCVSLEHILLAANSLTGSIPPSLGNCTELRSLLLSSNMLQG-DIPSSFGQLVNLEVLDLSRNFLSGI 270 (1082)
Q Consensus 192 N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~-~~p~~~~~l~~L~~L~Ls~N~l~~~ 270 (1082)
|++++..|..+ ..+++|++|++++|++++..+..++++++|++|++++|.+++ .+|..|+.+++|++|++++|++++.
T Consensus 86 n~l~~~~~~~~-~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~l~~n~l~~~ 164 (570)
T 2z63_A 86 NPIQSLALGAF-SGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSI 164 (570)
T ss_dssp CCCCEECTTTT-TTCTTCCEEECTTSCCCCSTTCSCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECTTSCCCEE
T ss_pred CcCCccCHhhh-cCccccccccccccccccCCCccccccccccEEecCCCccceecChhhhcccCCCCEEeCcCCcccee
Confidence 99995444555 479999999999999997666689999999999999999986 4699999999999999999999988
Q ss_pred CCccccCCCCC----cEEEeccccCCcccccCCCCCCcccccCCCcccccCCCCCccccCCCCCcEEEcCCCc-------
Q 045553 271 VPSELGMCKQL----KVLVLRNDYGPLYSREHGDLPIQPVVDGGEDYNFFDGGLPDSITRLPNLRVFWAPNLN------- 339 (1082)
Q Consensus 271 ~p~~l~~l~~L----~~L~l~~n~~~~~~~~~~~l~~~~~~~~~~~~n~~~~~~p~~l~~l~~L~~L~l~~n~------- 339 (1082)
.|..++.+++| +.|++++|.+.. ..|..+..+ +|+.|++++|.
T Consensus 165 ~~~~~~~l~~L~~~~~~L~l~~n~l~~-------------------------~~~~~~~~~-~L~~L~l~~n~~~~~~~~ 218 (570)
T 2z63_A 165 YCTDLRVLHQMPLLNLSLDLSLNPMNF-------------------------IQPGAFKEI-RLHKLTLRNNFDSLNVMK 218 (570)
T ss_dssp CGGGGHHHHTCTTCCCEEECTTCCCCE-------------------------ECTTTTTTC-EEEEEEEESCCSCTTHHH
T ss_pred cHHHccchhccchhhhhcccCCCCcee-------------------------cCHHHhccC-cceeEecccccccccchh
Confidence 88999999999 899998865443 333334333 55666555542
Q ss_pred ------------------------ccCCCCccccccc--CCCeEEcCCc-cccCCCCccccCCCCCCEEecCCCcCcccC
Q 045553 340 ------------------------LEGIFPQNWELCS--KLEMLNLAHN-FFTGQIPASLGNCKSLYFLDLSSNNLTGLL 392 (1082)
Q Consensus 340 ------------------------l~~~~~~~l~~l~--~L~~L~Ls~N-~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~ 392 (1082)
+.......+..+. .++.+++++| .+.+..|..+..+++|+.|++++|.+++.+
T Consensus 219 ~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~l~~l~l~~l~l~~~~~~~~~~~~~~~~l~~L~~L~l~~~~l~~l~ 298 (570)
T 2z63_A 219 TCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLAYLDYYLDDIIDLFNCLTNVSSFSLVSVTIERVK 298 (570)
T ss_dssp HHHHTTTTCEEEEEEEEECCCCSSCEECCTTTTGGGGGSEEEEEEEEETTEEESCSTTTTGGGTTCSEEEEESCEECSCC
T ss_pred hhhcCccccceeeeccccccCchhhhhcchhhhccccccchhhhhhhcchhhhhhchhhhcCcCcccEEEecCccchhhh
Confidence 1222223333333 2567777777 788888999999999999999999999654
Q ss_pred CCCcccCcccEEEecCCcceecCCCCCCcccccccccccccceeeeeecccccccccccCcCCCCCCCCCceeEeeccCC
Q 045553 393 PEEVSVPCMAVFNVSQNLLSGEIPRISHSECSKMSVNWSMSQVDLIGFYTAFFYENALTSCAPFSSPSNGLFILHDFSNN 472 (1082)
Q Consensus 393 p~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~n 472 (1082)
+....+ +|+.|++++|.+. .+|.. .+.. +..+++++|
T Consensus 299 ~~~~~~-~L~~L~l~~n~~~-~l~~~---~l~~--------------------------------------L~~L~l~~n 335 (570)
T 2z63_A 299 DFSYNF-GWQHLELVNCKFG-QFPTL---KLKS--------------------------------------LKRLTFTSN 335 (570)
T ss_dssp BCCSCC-CCSEEEEESCBCS-SCCBC---BCSS--------------------------------------CCEEEEESC
T ss_pred hhhccC-CccEEeeccCccc-ccCcc---cccc--------------------------------------cCEEeCcCC
Confidence 444456 9999999999986 33321 0000 112233444
Q ss_pred cccCCCCCccccCCCccccccceeeeccCCCccccCCcccccccCCceeEEEccCCcccccCC-ccccccCCcccEEEcc
Q 045553 473 LFTGPVPPFLIDSDSLSSRPYYGFWLSGNSLKGNLSTYPFDLCLSLDGLIFDIGNNKLIGEVP-SDMGSHCKCMKFLSMA 551 (1082)
Q Consensus 473 ~~~g~~p~~~~~~~~l~~~~~~~~~~~~n~~~~~l~~~p~~~~~~~~l~~l~l~~n~l~~~ip-~~~~~~~~~L~~L~L~ 551 (1082)
.+.+.+|. ....++++|++++|++.+... ...+..+++|++|+++
T Consensus 336 ~~~~~~~~----------------------------------~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~l~ 381 (570)
T 2z63_A 336 KGGNAFSE----------------------------------VDLPSLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLS 381 (570)
T ss_dssp BSCCBCCC----------------------------------CBCTTCCEEECCSSCCBEEEEEEHHHHTCSCCCEEECC
T ss_pred cccccccc----------------------------------ccCCCCCEEeCcCCccCccccccccccccCccCEEECC
Confidence 43332221 345678899999999875421 2334567889999999
Q ss_pred CCcccccCccccCCCCCCCEEEccCCCCCCCCc-ccccCCCCCCEEEcCCCcCCccCchhhhcCcccchhhccCcccC-C
Q 045553 552 GNEFVGLIPQSFTNFDSLRNLNLSRNHLQGPLP-SYINKMEDLKFLSLSLNNFTGAIPWELTQLASLEVLELSANSLS-G 629 (1082)
Q Consensus 552 ~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~-~ 629 (1082)
+|++++..+. |..+++|++|++++|.+++..| ..|..+++|++|++++|++++..|..|.++++|++|+|++|+++ +
T Consensus 382 ~n~l~~~~~~-~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~ 460 (570)
T 2z63_A 382 FNGVITMSSN-FLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQEN 460 (570)
T ss_dssp SCSEEEEEEE-EETCTTCCEEECTTSEEESCTTSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGG
T ss_pred CCcccccccc-ccccCCCCEEEccCCccccccchhhhhcCCCCCEEeCcCCcccccchhhhhcCCcCcEEECcCCcCccc
Confidence 9999987666 9999999999999999997766 57899999999999999999999999999999999999999998 5
Q ss_pred CCCccccCCcccceecccCcccCCCCCCCCCCCCcccEEeccCCccccCCCCC----cccccccCCCCCCCCCCCCCCCC
Q 045553 630 EIPSEFSKLEHLNVLRLDHNNLTGRIPPGFGTRSSLSIFDVSFNNLSGSAPRN----SLIKCENVQGNPNLQLCHTDPSS 705 (1082)
Q Consensus 630 ~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~l~ls~N~l~~~~p~~----~~~~~~~~~~Np~~c~c~~~~~~ 705 (1082)
.+|..|..+++|++|+|++|++++..|..|..+++|++|++++|++++..|.. ..+....+.+||+.|+|....+.
T Consensus 461 ~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~~~~~~ 540 (570)
T 2z63_A 461 FLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMASNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPRIDYL 540 (570)
T ss_dssp EECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTTTTHHH
T ss_pred cchhhhhcccCCCEEECCCCccccCChhhhhcccCCCEEeCCCCcCCCCCHHHhhcccCCcEEEecCCcccCCCcchHHH
Confidence 78999999999999999999999998999999999999999999999876643 33466789999999999854433
Q ss_pred CcccccC
Q 045553 706 SEWERQH 712 (1082)
Q Consensus 706 ~~~~~~~ 712 (1082)
..|....
T Consensus 541 ~~wl~~~ 547 (570)
T 2z63_A 541 SRWLNKN 547 (570)
T ss_dssp HHHHHHT
T ss_pred HHHHHhc
Confidence 3666543
No 22
>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=6.1e-47 Score=420.08 Aligned_cols=270 Identities=24% Similarity=0.317 Sum_probs=205.6
Q ss_pred cCccccceecccCceEEEEEEEcCCeEEEEEEeecCccccHHHHHHHHHHHhccCCCceeeEeeeeccCC----eEEEEE
Q 045553 801 AGFNVQNCIGSGGFGATYKAEIIPGVVVAVKRLSVGRFQGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEA----EMFLIY 876 (1082)
Q Consensus 801 ~~~~~~~~lg~G~~g~Vy~a~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~----~~~lV~ 876 (1082)
.+|.+.++||+|+||+||+|++ +|+.||||++..... ....+.+|+..+.+++|||||++++++.+++ ..++||
T Consensus 3 r~i~L~~~iG~G~fG~Vy~~~~-~g~~VAvK~l~~~~~-~~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~lV~ 80 (303)
T 3hmm_A 3 RTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSREE-RSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVS 80 (303)
T ss_dssp GGEEEEEEEEECSSSEEEEEEE-TTEEEEEEEECGGGH-HHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEE
T ss_pred cEEEEEEEEeeCCCeEEEEEEE-CCEEEEEEEECccch-hhHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEEEEEe
Confidence 3577889999999999999988 489999999865432 1223345666677899999999999998653 689999
Q ss_pred eecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCC-----CCCeEeccCCCCCEEEcCCCcEEEeeccccee
Q 045553 877 NYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDEC-----VPRVLHRDIKPSNILLDNNLNAYLSDFGLARL 951 (1082)
Q Consensus 877 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~-----~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~ 951 (1082)
||+++|+|.++++.. .++|+.+.+++.|+++||+|||+.+ .++|+||||||+|||++.++++||+|||+|+.
T Consensus 81 Ey~~~gsL~~~l~~~---~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~ 157 (303)
T 3hmm_A 81 DYHEHGSLFDYLNRY---TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVR 157 (303)
T ss_dssp ECCTTCBHHHHHHHC---CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTCEE
T ss_pred cCCCCCcHHHHHHhC---CCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEEeCCCCcc
Confidence 999999999999864 5899999999999999999999863 45899999999999999999999999999987
Q ss_pred cCCCCCc---cccCcccCCCcccchhcccC------CCCchhhHHHHHHHHHHHHhCCCCCCCCccC---C---C-CCcc
Q 045553 952 LGTSETH---ATTDVAGTFGYVAPEYAMTC------RVSDKADVYSFGVVLLELISDKKALDPSFCS---F---G-NGFN 1015 (1082)
Q Consensus 952 ~~~~~~~---~~~~~~gt~~y~aPE~~~~~------~~~~~~Dv~slGvll~elltg~~p~~~~~~~---~---~-~~~~ 1015 (1082)
....... .....+||+.|+|||++.+. .++.++|||||||++|||+||+.|+...... + . ....
T Consensus 158 ~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~~p~~~~~~~~~~ 237 (303)
T 3hmm_A 158 HDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPS 237 (303)
T ss_dssp EETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSSCC
T ss_pred ccCCCCceeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCccccccccchhcccccch
Confidence 7544322 22346799999999999764 4678999999999999999998887533211 0 0 1112
Q ss_pred HHHHHHHHHhcCCCccccccccCC-CCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhhCCC
Q 045553 1016 IVAWASMLLLQGRPCEFFTAGLWD-CGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQLKQIQPP 1080 (1082)
Q Consensus 1016 ~~~~~~~~~~~~~~~~~~d~~l~~-~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L~~i~~~ 1080 (1082)
..++... +..+.. ++.+-. ..+.+....+.+++.+||+.||++||||.||++.|+++...
T Consensus 238 ~~~~~~~-~~~~~~----rp~~p~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~~l~~~ 298 (303)
T 3hmm_A 238 VEEMRKV-VCEQKL----RPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQ 298 (303)
T ss_dssp HHHHHHH-HTTSCC----CCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred HHHHHHH-HhcccC----CCCCCccccchHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHHHH
Confidence 2232222 222211 111111 01235667899999999999999999999999999988654
No 23
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=100.00 E-value=3.6e-47 Score=416.75 Aligned_cols=247 Identities=21% Similarity=0.342 Sum_probs=211.7
Q ss_pred cCccccceecccCceEEEEEEE-cCCeEEEEEEeecC---ccccHHHHHHHHHHHhccCCCceeeEeeeeccCCeEEEEE
Q 045553 801 AGFNVQNCIGSGGFGATYKAEI-IPGVVVAVKRLSVG---RFQGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFLIY 876 (1082)
Q Consensus 801 ~~~~~~~~lg~G~~g~Vy~a~~-~~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 876 (1082)
++|++.+.||+|+||+||+|+. .+|+.||||++... .....+.+.+|++++++++|||||++++++.+++..|+||
T Consensus 32 ~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~yivm 111 (311)
T 4aw0_A 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGL 111 (311)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence 4699999999999999999965 46899999999753 2344678999999999999999999999999999999999
Q ss_pred eecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCCCC
Q 045553 877 NYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGTSE 956 (1082)
Q Consensus 877 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~ 956 (1082)
||++||+|.++++.. ..+++..+..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+|+.+....
T Consensus 112 Ey~~gG~L~~~i~~~--~~l~e~~~~~~~~qi~~al~ylH~~---~IiHRDlKPeNILl~~~g~vKl~DFGla~~~~~~~ 186 (311)
T 4aw0_A 112 SYAKNGELLKYIRKI--GSFDETCTRFYTAEIVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES 186 (311)
T ss_dssp CCCTTEEHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCCTTCEECCTTT
T ss_pred ecCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCHHHeEEcCCCCEEEEEcCCceecCCCC
Confidence 999999999999874 4699999999999999999999999 99999999999999999999999999999875433
Q ss_pred C-ccccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCCCcccccc
Q 045553 957 T-HATTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQGRPCEFFTA 1035 (1082)
Q Consensus 957 ~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 1035 (1082)
. ......+||+.|+|||++.+..|+.++||||+||++|||++|+.||... +..+....+.... .
T Consensus 187 ~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~--------~~~~~~~~i~~~~-~------ 251 (311)
T 4aw0_A 187 KQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAG--------NEGLIFAKIIKLE-Y------ 251 (311)
T ss_dssp TCCCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCS--------SHHHHHHHHHHTC-C------
T ss_pred CcccccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC--------CHHHHHHHHHcCC-C------
Confidence 2 3455678999999999999999999999999999999999999999632 2334444433322 1
Q ss_pred ccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHH
Q 045553 1036 GLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVA 1071 (1082)
Q Consensus 1036 ~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~ 1071 (1082)
..|...+.++.+++.+|++.||++|||+.|+.
T Consensus 252 ----~~p~~~s~~~~dli~~lL~~dp~~R~t~~e~~ 283 (311)
T 4aw0_A 252 ----DFPEKFFPKARDLVEKLLVLDATKRLGCEEME 283 (311)
T ss_dssp ----CCCTTCCHHHHHHHHHHSCSSGGGSTTSGGGT
T ss_pred ----CCCcccCHHHHHHHHHHccCCHhHCcChHHHc
Confidence 12334456789999999999999999998863
No 24
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=100.00 E-value=5.7e-47 Score=420.48 Aligned_cols=252 Identities=21% Similarity=0.257 Sum_probs=207.4
Q ss_pred hcCccccceecccCceEEEEEEEc-CCeEEEEEEeecCccccHHHHHHHHHHHhccCCCceeeEeeeeccCCeEEEEEee
Q 045553 800 TAGFNVQNCIGSGGFGATYKAEII-PGVVVAVKRLSVGRFQGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFLIYNY 878 (1082)
Q Consensus 800 ~~~~~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~ 878 (1082)
...|++.++||+|+||+||+|+.. +|+.||||+++..... .+|++++++++|||||++++++.+++..|+||||
T Consensus 57 ~~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~~-----~~E~~il~~l~HpnIV~l~~~~~~~~~~~ivmEy 131 (336)
T 4g3f_A 57 VHWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFR-----VEELVACAGLSSPRIVPLYGAVREGPWVNIFMEL 131 (336)
T ss_dssp TTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCC-----THHHHTTTTCCCTTBCCEEEEEEETTEEEEEECC
T ss_pred hhheEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHHhH-----HHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEec
Confidence 356888899999999999999754 6899999999765332 4799999999999999999999999999999999
Q ss_pred cCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCC-cEEEeecccceecCCCCC
Q 045553 879 LPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNL-NAYLSDFGLARLLGTSET 957 (1082)
Q Consensus 879 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~-~~kl~DfGla~~~~~~~~ 957 (1082)
++||+|.++++.. ..+++..+..++.||+.||+|||++ +|+||||||+|||++.++ .+||+|||+|+.+.....
T Consensus 132 ~~gg~L~~~l~~~--~~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~~~~~ 206 (336)
T 4g3f_A 132 LEGGSLGQLIKQM--GCLPEDRALYYLGQALEGLEYLHTR---RILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGL 206 (336)
T ss_dssp CTTCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCCGGGEEECTTSCCEEECCCTTCEEC-----
T ss_pred cCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC---CceecccCHHHEEEeCCCCEEEEeeCCCCeEccCCCc
Confidence 9999999999874 4699999999999999999999999 999999999999999988 699999999998754322
Q ss_pred c----cccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCCCcccc
Q 045553 958 H----ATTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQGRPCEFF 1033 (1082)
Q Consensus 958 ~----~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1033 (1082)
. .....+||+.|||||++.+..|+.++||||+||++|||++|+.||...... .- +..+..+.....
T Consensus 207 ~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~----~~----~~~i~~~~~~~~-- 276 (336)
T 4g3f_A 207 GKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRG----PL----CLKIASEPPPIR-- 276 (336)
T ss_dssp -------CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCCS----CC----HHHHHHSCCGGG--
T ss_pred ccceecCCccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHH----HH----HHHHHcCCCCch--
Confidence 1 223467999999999999999999999999999999999999999753221 11 112222211100
Q ss_pred ccccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhh
Q 045553 1034 TAGLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQLKQI 1077 (1082)
Q Consensus 1034 d~~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L~~i 1077 (1082)
..+...+..+.+++.+||+.||++|||+.|++++|...
T Consensus 277 ------~~~~~~s~~~~~li~~~L~~dP~~R~sa~el~~~l~~~ 314 (336)
T 4g3f_A 277 ------EIPPSCAPLTAQAIQEGLRKEPVHRASAMELRRKVGKA 314 (336)
T ss_dssp ------GSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred ------hcCccCCHHHHHHHHHHccCCHhHCcCHHHHHHHHHHH
Confidence 12345567899999999999999999999999888653
No 25
>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*
Probab=100.00 E-value=5.5e-47 Score=426.35 Aligned_cols=264 Identities=23% Similarity=0.353 Sum_probs=218.0
Q ss_pred HHHHHhcCccccceecccCceEEEEEEEcC------CeEEEEEEeecCcc-ccHHHHHHHHHHHhccCC-CceeeEeeee
Q 045553 795 NVVRATAGFNVQNCIGSGGFGATYKAEIIP------GVVVAVKRLSVGRF-QGVQQFAAEIRTLGRVQH-PNLVTLIGYH 866 (1082)
Q Consensus 795 ~~~~~~~~~~~~~~lg~G~~g~Vy~a~~~~------~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h-~niv~l~~~~ 866 (1082)
+.+...++|++.+.||+|+||+||+|++.. ++.||||++..... ...+.|.+|++++++++| ||||+++++|
T Consensus 58 ~wEi~~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~hhpnIV~l~g~~ 137 (353)
T 4ase_A 58 KWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGAC 137 (353)
T ss_dssp HHBCCGGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred ccEecHHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcCCCCcEEEEEEEE
Confidence 333445789999999999999999997642 36899999976543 345679999999999976 8999999998
Q ss_pred ccC-CeEEEEEeecCCCCHHHHHhhCC--------------CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCC
Q 045553 867 VSE-AEMFLIYNYLPGGNLEKFIQDRP--------------RRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPS 931 (1082)
Q Consensus 867 ~~~-~~~~lV~E~~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~ 931 (1082)
.+. ...++|||||++|+|.++++... ...+++.++..++.|||+||+|||+. +||||||||+
T Consensus 138 ~~~~~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~~---~iiHRDLK~~ 214 (353)
T 4ase_A 138 TKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAAR 214 (353)
T ss_dssp CCTTSCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGG
T ss_pred EecCCEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhhC---CeecCccCcc
Confidence 764 56899999999999999998642 24589999999999999999999999 9999999999
Q ss_pred CEEEcCCCcEEEeecccceecCCCCCc-cccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCccC
Q 045553 932 NILLDNNLNAYLSDFGLARLLGTSETH-ATTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELIS-DKKALDPSFCS 1009 (1082)
Q Consensus 932 Nill~~~~~~kl~DfGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~ellt-g~~p~~~~~~~ 1009 (1082)
|||+++++.+||+|||+|+.+...... ......||+.|||||++.+..|+.++|||||||++|||+| |+.||......
T Consensus 215 NILl~~~~~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t~G~~Pf~~~~~~ 294 (353)
T 4ase_A 215 NILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID 294 (353)
T ss_dssp GEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCS
T ss_pred ceeeCCCCCEEECcchhhhhcccCCCceeeccccccccccCHHHHhcCCCCCcccEeehHHHHHHHHhCCCCCCCCCCHH
Confidence 999999999999999999977544332 3445679999999999999999999999999999999998 89999743211
Q ss_pred CCCCccHHHHHHHHHhcCCCccccccccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhhC
Q 045553 1010 FGNGFNIVAWASMLLLQGRPCEFFTAGLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQLKQIQ 1078 (1082)
Q Consensus 1010 ~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L~~i~ 1078 (1082)
+.+...+.++... ..|...+.++.+++.+||+.||++||||.||+++|+.+.
T Consensus 295 --------~~~~~~i~~g~~~---------~~p~~~~~~~~~li~~c~~~dP~~RPt~~eil~~L~~ll 346 (353)
T 4ase_A 295 --------EEFCRRLKEGTRM---------RAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLL 346 (353)
T ss_dssp --------HHHHHHHHHTCCC---------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred --------HHHHHHHHcCCCC---------CCCccCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHH
Confidence 2233333333222 234455678999999999999999999999999998864
No 26
>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}
Probab=100.00 E-value=1.5e-46 Score=410.32 Aligned_cols=246 Identities=24% Similarity=0.373 Sum_probs=200.5
Q ss_pred ccccceecccCceEEEEEEEc-CCeEEEEEEeecCc--cccHHHHHHHHHHHhccCCCceeeEeeeecc----CCeEEEE
Q 045553 803 FNVQNCIGSGGFGATYKAEII-PGVVVAVKRLSVGR--FQGVQQFAAEIRTLGRVQHPNLVTLIGYHVS----EAEMFLI 875 (1082)
Q Consensus 803 ~~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~----~~~~~lV 875 (1082)
|++.+.||+|+||+||+|... ++..||+|++.... ....+.|.+|++++++++|||||++++++.+ +...|+|
T Consensus 28 ~~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~lv 107 (290)
T 3fpq_A 28 LKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLV 107 (290)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEEE
T ss_pred EEeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEEE
Confidence 367788999999999999754 58999999996543 3345679999999999999999999998864 3568999
Q ss_pred EeecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCC--eEeccCCCCCEEEc-CCCcEEEeecccceec
Q 045553 876 YNYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPR--VLHRDIKPSNILLD-NNLNAYLSDFGLARLL 952 (1082)
Q Consensus 876 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~--ivH~Dlk~~Nill~-~~~~~kl~DfGla~~~ 952 (1082)
|||+++|+|.++++.. ..+++..+..++.||+.||+|||++ + |+||||||+|||++ .++.+||+|||+|+..
T Consensus 108 mEy~~gg~L~~~l~~~--~~l~~~~~~~~~~qi~~aL~ylH~~---~~~IiHRDlKp~NILl~~~~g~vKl~DFGla~~~ 182 (290)
T 3fpq_A 108 TELMTSGTLKTYLKRF--KVMKIKVLRSWCRQILKGLQFLHTR---TPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLK 182 (290)
T ss_dssp EECCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHTS---SSCCCCCCCCGGGEEESSTTSCEEECCTTGGGGC
T ss_pred EeCCCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CCCEEecccChhheeEECCCCCEEEEeCcCCEeC
Confidence 9999999999999874 4799999999999999999999998 6 99999999999998 4799999999999864
Q ss_pred CCCCCccccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCCCccc
Q 045553 953 GTSETHATTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQGRPCEF 1032 (1082)
Q Consensus 953 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1032 (1082)
.. ......+||+.|||||++.+ .|+.++|||||||++|||+||+.||... ........ .+..+.....
T Consensus 183 ~~---~~~~~~~GTp~YmAPE~~~~-~y~~~~DiwSlGvilyelltg~~Pf~~~-------~~~~~~~~-~i~~~~~~~~ 250 (290)
T 3fpq_A 183 RA---SFAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSEC-------QNAAQIYR-RVTSGVKPAS 250 (290)
T ss_dssp CT---TSBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTC-------SSHHHHHH-HHTTTCCCGG
T ss_pred CC---CccCCcccCccccCHHHcCC-CCCcHHHHHHHHHHHHHHHHCCCCCCCC-------CcHHHHHH-HHHcCCCCCC
Confidence 32 23345689999999998865 6999999999999999999999999632 12223222 2333322211
Q ss_pred cccccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 045553 1033 FTAGLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQ 1073 (1082)
Q Consensus 1033 ~d~~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~ 1073 (1082)
++ ...+.++.+++.+||+.||++|||+.|++++
T Consensus 251 ~~--------~~~~~~~~~li~~~L~~dP~~R~s~~e~l~H 283 (290)
T 3fpq_A 251 FD--------KVAIPEVKEIIEGCIRQNKDERYSIKDLLNH 283 (290)
T ss_dssp GG--------GCCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred CC--------ccCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 11 1223578999999999999999999999864
No 27
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=100.00 E-value=2.5e-46 Score=426.69 Aligned_cols=250 Identities=22% Similarity=0.326 Sum_probs=214.0
Q ss_pred cCccccceecccCceEEEEEEEc-CCeEEEEEEeecCccccHHHHHHHHHHHhccCCCceeeEeeeeccCCeEEEEEeec
Q 045553 801 AGFNVQNCIGSGGFGATYKAEII-PGVVVAVKRLSVGRFQGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFLIYNYL 879 (1082)
Q Consensus 801 ~~~~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~~ 879 (1082)
..|++.+.||+|+||+||+|... +|+.||||++........+.+.+|++++++++|||||++++++.+.+.+|+|||||
T Consensus 151 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iVmEy~ 230 (423)
T 4fie_A 151 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFL 230 (423)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCSSGGGHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred HhcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCCCceEEEEEECCEEEEEEeCC
Confidence 56999999999999999999754 69999999998766666677899999999999999999999999999999999999
Q ss_pred CCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCCCCCcc
Q 045553 880 PGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGTSETHA 959 (1082)
Q Consensus 880 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~ 959 (1082)
+||+|.++++.. .+++..+..|+.||+.||+|||++ +||||||||+|||++.++.+||+|||+|+.+..... .
T Consensus 231 ~gG~L~~~i~~~---~l~e~~~~~~~~qil~aL~ylH~~---~IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~~~~-~ 303 (423)
T 4fie_A 231 EGGALTDIVTHT---RMNEEQIAAVCLAVLQALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVP-R 303 (423)
T ss_dssp TTEEHHHHHHHS---CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSTTTEEECTTCCEEECCCTTCEECCSSCC-C
T ss_pred CCCcHHHHHhcc---CCCHHHHHHHHHHHHHHHHHHHHC---CeecccCCHHHEEEcCCCCEEEecCccceECCCCCc-c
Confidence 999999999864 599999999999999999999999 999999999999999999999999999998754332 3
Q ss_pred ccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCCCccccccccCC
Q 045553 960 TTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQGRPCEFFTAGLWD 1039 (1082)
Q Consensus 960 ~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 1039 (1082)
....+||+.|||||++.+..|+.++||||+||++|||++|+.||... +..+.+..+.... ....
T Consensus 304 ~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~--------~~~~~~~~i~~~~-~~~~------- 367 (423)
T 4fie_A 304 RKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNE--------PPLKAMKMIRDNL-PPRL------- 367 (423)
T ss_dssp BCCCEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTS--------CHHHHHHHHHHSC-CCCC-------
T ss_pred ccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCc--------CHHHHHHHHHcCC-CCCC-------
Confidence 45678999999999999999999999999999999999999999632 2333333332221 1111
Q ss_pred CCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 045553 1040 CGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQ 1073 (1082)
Q Consensus 1040 ~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~ 1073 (1082)
..+...+.++.+|+.+||+.||++|||+.|++++
T Consensus 368 ~~~~~~s~~~~dli~~~L~~dP~~R~ta~ell~H 401 (423)
T 4fie_A 368 KNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKH 401 (423)
T ss_dssp SCTTSSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred cccccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 1123445689999999999999999999999874
No 28
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=2.7e-46 Score=404.56 Aligned_cols=246 Identities=24% Similarity=0.346 Sum_probs=195.6
Q ss_pred cCccccceecccCceEEEEEEE-cCCeEEEEEEeecCc---cccHHHHHHHHHHHhccCCCceeeEeeeeccCCeEEEEE
Q 045553 801 AGFNVQNCIGSGGFGATYKAEI-IPGVVVAVKRLSVGR---FQGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFLIY 876 (1082)
Q Consensus 801 ~~~~~~~~lg~G~~g~Vy~a~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 876 (1082)
++|++.+.||+|+||+||+|.. .+|+.||||++.... ....+.+.+|++++++++|||||++++++.+++..|+||
T Consensus 13 g~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivm 92 (275)
T 3hyh_A 13 GNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVI 92 (275)
T ss_dssp -CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred eCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEE
Confidence 5799999999999999999964 469999999997542 234567999999999999999999999999999999999
Q ss_pred eecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCCCC
Q 045553 877 NYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGTSE 956 (1082)
Q Consensus 877 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~ 956 (1082)
||+ +|+|.+++..+ ..+++..+..++.||+.||+|||++ +|+||||||+|||+++++.+||+|||+|+......
T Consensus 93 Ey~-~g~L~~~l~~~--~~l~e~~~~~~~~qi~~al~ylH~~---~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~~~ 166 (275)
T 3hyh_A 93 EYA-GNELFDYIVQR--DKMSEQEARRFFQQIISAVEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGN 166 (275)
T ss_dssp ECC-CEEHHHHHHHS--CSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCTTTEEECTTCCEEECCSSCC-------
T ss_pred eCC-CCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCChHHeEECCCCCEEEeecCCCeecCCCC
Confidence 999 78999999874 4799999999999999999999999 99999999999999999999999999998764332
Q ss_pred CccccCcccCCCcccchhcccCCC-CchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCCCcccccc
Q 045553 957 THATTDVAGTFGYVAPEYAMTCRV-SDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQGRPCEFFTA 1035 (1082)
Q Consensus 957 ~~~~~~~~gt~~y~aPE~~~~~~~-~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 1035 (1082)
.....+||+.|+|||++.+..+ +.++||||+||++|||++|+.||... +..+......... .
T Consensus 167 --~~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~--------~~~~~~~~i~~~~-~------ 229 (275)
T 3hyh_A 167 --FLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDE--------SIPVLFKNISNGV-Y------ 229 (275)
T ss_dssp ----------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCS--------SHHHHHHHHHHTC-C------
T ss_pred --ccCCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCC--------CHHHHHHHHHcCC-C------
Confidence 3345689999999999998876 57999999999999999999999632 3334444333221 1
Q ss_pred ccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 045553 1036 GLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQ 1073 (1082)
Q Consensus 1036 ~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~ 1073 (1082)
..|...+.++.+++.+|++.||++|||+.|++++
T Consensus 230 ----~~p~~~s~~~~~li~~~L~~dP~~R~s~~eil~h 263 (275)
T 3hyh_A 230 ----TLPKFLSPGAAGLIKRMLIVNPLNRISIHEIMQD 263 (275)
T ss_dssp ----CCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHHC
T ss_pred ----CCCCCCCHHHHHHHHHHccCChhHCcCHHHHHcC
Confidence 1223345678999999999999999999999874
No 29
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=100.00 E-value=2.2e-45 Score=446.85 Aligned_cols=486 Identities=15% Similarity=0.157 Sum_probs=338.9
Q ss_pred cccccccCCCCCCEEEcccCCCcccCChhhcCCCCCCEEeCcCCCCCCCCCccccCCCCCCeEEccCcccccccCccccC
Q 045553 101 NLSRAIGDLTQLRVLLLAFNGFSGELPLEIGQLSLLEILDLSFNSFHGPIPPTLQNCSSLRLINLSGNQFNGTIPAFFGQ 180 (1082)
Q Consensus 101 ~l~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~ 180 (1082)
.+|+.+. ++|++|+|++|++++..|..|+.+++|++|+|++|++++..|..|+++++|++|+|++|++++..|..|++
T Consensus 19 ~ip~~~~--~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~ 96 (549)
T 2z81_A 19 SIPSGLT--AAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGDAFYSLGSLEHLDLSDNHLSSLSSSWFGP 96 (549)
T ss_dssp SCCSCCC--TTCCEEECCSSCCCEECSSTTSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCSCCHHHHTT
T ss_pred cccccCC--CCccEEECcCCccCccChhhhhcCCcccEEECCCCCcCccChhhccccccCCEEECCCCccCccCHHHhcc
Confidence 4565554 78899999999988777888899999999999999998777788889999999999999998777777888
Q ss_pred CCCCcEEEcccCcccc-cCCcccccccccccEEEcccCccCCCCC-ccccCCCCccEEEccCCcCCCCcCccccCCCCCC
Q 045553 181 SPGFQVVSLSFNLLSG-SVPEEFGDNCVSLEHILLAANSLTGSIP-PSLGNCTELRSLLLSSNMLQGDIPSSFGQLVNLE 258 (1082)
Q Consensus 181 l~~L~~L~L~~N~l~~-~~p~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~ 258 (1082)
+++|++|+|++|++++ ..|..+ ..+++|++|++++|++.+.+| ..+.++++|++|++++|++++..|..++.+++|+
T Consensus 97 l~~L~~L~Ls~n~l~~~~~~~~~-~~l~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~ 175 (549)
T 2z81_A 97 LSSLKYLNLMGNPYQTLGVTSLF-PNLTNLQTLRIGNVETFSEIRRIDFAGLTSLNELEIKALSLRNYQSQSLKSIRDIH 175 (549)
T ss_dssp CTTCCEEECTTCCCSSSCSSCSC-TTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECTTTTTTCSEEE
T ss_pred CCCCcEEECCCCcccccchhhhh-hccCCccEEECCCCccccccCHhhhhcccccCeeeccCCcccccChhhhhccccCc
Confidence 8999999999998885 234444 367888888888888444444 5788888888888888888877888888888888
Q ss_pred EEeCCCCcCcccCCccccCCCCCcEEEeccccCCcccccCCCCCCcccccCCCcccccCCCCCccccCCCCCcEEEcCCC
Q 045553 259 VLDLSRNFLSGIVPSELGMCKQLKVLVLRNDYGPLYSREHGDLPIQPVVDGGEDYNFFDGGLPDSITRLPNLRVFWAPNL 338 (1082)
Q Consensus 259 ~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~n~~~~~~~~~~~l~~~~~~~~~~~~n~~~~~~p~~l~~l~~L~~L~l~~n 338 (1082)
+|+++.|.+....+..+..+++|++|++++|.+...... .......+++|+.|++++|
T Consensus 176 ~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~----------------------~~~~~~~~~~L~~L~l~~n 233 (549)
T 2z81_A 176 HLTLHLSESAFLLEIFADILSSVRYLELRDTNLARFQFS----------------------PLPVDEVSSPMKKLAFRGS 233 (549)
T ss_dssp EEEEECSBSTTHHHHHHHSTTTBSEEEEESCBCTTCCCC----------------------CCSSCCCCCCCCEEEEESC
T ss_pred eEecccCcccccchhhHhhcccccEEEccCCcccccccc----------------------ccchhhhhhcccceecccc
Confidence 888888887643333345677788888877643321100 0011123455555555555
Q ss_pred cccCCCCcc----cccccCCCeEEcCCccccCCC------CccccCCCCCCEEecCCCcCcccCCCCcccCcccEEEecC
Q 045553 339 NLEGIFPQN----WELCSKLEMLNLAHNFFTGQI------PASLGNCKSLYFLDLSSNNLTGLLPEEVSVPCMAVFNVSQ 408 (1082)
Q Consensus 339 ~l~~~~~~~----l~~l~~L~~L~Ls~N~i~~~~------p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~l~~L~~L~l~~ 408 (1082)
.+.+..+.. +..+++|+.|++++|.+.+.. ...+..+ ++++.|++.+
T Consensus 234 ~l~~~~~~~l~~~~~~~~~L~~l~l~~~~~~~~~~~~~~~~~~~~~l-----------------------~~L~~L~l~~ 290 (549)
T 2z81_A 234 VLTDESFNELLKLLRYILELSEVEFDDCTLNGLGDFNPSESDVVSEL-----------------------GKVETVTIRR 290 (549)
T ss_dssp EEEHHHHHHHHGGGGGCTTCCEEEEESCEEECCSCCCCCTTTCCCCC-----------------------TTCCEEEEES
T ss_pred ccchhHHHHHHHHhhhhccccccccccccccccccccccchhhhhhh-----------------------cccccccccc
Confidence 554433222 233455555555555554321 1112333 4445555554
Q ss_pred CcceecCCCCCCcccccccccccccceeeeeecccccccccccCcCCCCCCCCCceeEeeccCCcccCCCCCccccCCCc
Q 045553 409 NLLSGEIPRISHSECSKMSVNWSMSQVDLIGFYTAFFYENALTSCAPFSSPSNGLFILHDFSNNLFTGPVPPFLIDSDSL 488 (1082)
Q Consensus 409 N~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~n~~~g~~p~~~~~~~~l 488 (1082)
+.+....... .++ .. ...
T Consensus 291 ~~i~~~~~~~------~l~-----------~~-----------------------------------------~~~---- 308 (549)
T 2z81_A 291 LHIPQFYLFY------DLS-----------TV-----------------------------------------YSL---- 308 (549)
T ss_dssp CBCSCGGGSC------CCC-----------HH-----------------------------------------HHH----
T ss_pred cccchhhhcc------cch-----------hh-----------------------------------------hhh----
Confidence 4432100000 000 00 000
Q ss_pred cccccceeeeccCCCccccCCcccccc-cCCceeEEEccCCcccccCCcc--ccccCCcccEEEccCCcccccCc--ccc
Q 045553 489 SSRPYYGFWLSGNSLKGNLSTYPFDLC-LSLDGLIFDIGNNKLIGEVPSD--MGSHCKCMKFLSMAGNEFVGLIP--QSF 563 (1082)
Q Consensus 489 ~~~~~~~~~~~~n~~~~~l~~~p~~~~-~~~~l~~l~l~~n~l~~~ip~~--~~~~~~~L~~L~L~~N~i~~~~~--~~~ 563 (1082)
...+..+.+++|.++ .+|..+. ...++++|++++|++.+.+|.. .+..+++|++|+|++|+|++..+ ..|
T Consensus 309 -~~~L~~L~l~~n~l~----~ip~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~ 383 (549)
T 2z81_A 309 -LEKVKRITVENSKVF----LVPCSFSQHLKSLEFLDLSENLMVEEYLKNSACKGAWPSLQTLVLSQNHLRSMQKTGEIL 383 (549)
T ss_dssp -STTCCEEEEESSCCC----CCCHHHHHHCTTCCEEECCSSCCCHHHHHHHTCTTSSTTCCEEECTTSCCCCHHHHHHHG
T ss_pred -cccceEEEeccCccc----cCCHHHHhcCccccEEEccCCccccccccchhhhhccccCcEEEccCCcccccccchhhh
Confidence 001122233333322 3344442 4567889999999999877643 34567889999999999997754 568
Q ss_pred CCCCCCCEEEccCCCCCCCCcccccCCCCCCEEEcCCCcCCccCchhhhcCcccchhhccCcccCCCCCccccCCcccce
Q 045553 564 TNFDSLRNLNLSRNHLQGPLPSYINKMEDLKFLSLSLNNFTGAIPWELTQLASLEVLELSANSLSGEIPSEFSKLEHLNV 643 (1082)
Q Consensus 564 ~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 643 (1082)
..+++|++|+|++|+++ .+|..+..+++|++|+|++|+++ .+|..+. ++|++|+|++|+|++.+ ..+++|++
T Consensus 384 ~~l~~L~~L~Ls~N~l~-~lp~~~~~~~~L~~L~Ls~N~l~-~l~~~~~--~~L~~L~Ls~N~l~~~~----~~l~~L~~ 455 (549)
T 2z81_A 384 LTLKNLTSLDISRNTFH-PMPDSCQWPEKMRFLNLSSTGIR-VVKTCIP--QTLEVLDVSNNNLDSFS----LFLPRLQE 455 (549)
T ss_dssp GGCTTCCEEECTTCCCC-CCCSCCCCCTTCCEEECTTSCCS-CCCTTSC--TTCSEEECCSSCCSCCC----CCCTTCCE
T ss_pred hcCCCCCEEECCCCCCc-cCChhhcccccccEEECCCCCcc-cccchhc--CCceEEECCCCChhhhc----ccCChhcE
Confidence 99999999999999999 67889999999999999999998 4555443 68999999999999643 57899999
Q ss_pred ecccCcccCCCCCCCCCCCCcccEEeccCCccccCCCCC----cccccccCCCCCCCCCCCCCCCCCccccc
Q 045553 644 LRLDHNNLTGRIPPGFGTRSSLSIFDVSFNNLSGSAPRN----SLIKCENVQGNPNLQLCHTDPSSSEWERQ 711 (1082)
Q Consensus 644 L~L~~N~l~~~~p~~~~~l~~L~~l~ls~N~l~~~~p~~----~~~~~~~~~~Np~~c~c~~~~~~~~~~~~ 711 (1082)
|+|++|+|+ .+|. ...+++|++|++++|++++.+|.. ..+....+.+|||.|+|....+...|...
T Consensus 456 L~Ls~N~l~-~ip~-~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~~~~~l~~~l~~ 525 (549)
T 2z81_A 456 LYISRNKLK-TLPD-ASLFPVLLVMKISRNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPRIDYLSRWLNK 525 (549)
T ss_dssp EECCSSCCS-SCCC-GGGCTTCCEEECCSSCCCCCCTTGGGGCTTCCEEECCSSCBCCCHHHHHHHHHHHHH
T ss_pred EECCCCccC-cCCC-cccCccCCEEecCCCccCCcCHHHHhcCcccCEEEecCCCccCCCccHHHHHHHHHh
Confidence 999999999 6776 467999999999999999877753 34567789999999999744444455543
No 30
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=100.00 E-value=1.1e-46 Score=463.62 Aligned_cols=453 Identities=19% Similarity=0.234 Sum_probs=333.6
Q ss_pred CCCCEEEcccCCCcccCChhhcCCCCCCEEeCcCCCCC------C------CCCccccCCCCCCeEEccCcccccccCcc
Q 045553 110 TQLRVLLLAFNGFSGELPLEIGQLSLLEILDLSFNSFH------G------PIPPTLQNCSSLRLINLSGNQFNGTIPAF 177 (1082)
Q Consensus 110 ~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~------~------~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~ 177 (1082)
.+++.|+|++|++.|.+|.+|++|++|++|+|++|.+. + .+|... +..|+ +++++|.+.+.+|..
T Consensus 81 ~~V~~L~L~~~~l~g~lp~~l~~L~~L~~L~Ls~N~~~~~~~~~~~~~~~~~~~~~~--~~~l~-l~l~~~~l~~~~~~~ 157 (636)
T 4eco_A 81 GRVTGLSLEGFGASGRVPDAIGQLTELEVLALGSHGEKVNERLFGPKGISANMSDEQ--KQKMR-MHYQKTFVDYDPRED 157 (636)
T ss_dssp CCEEEEECTTSCCEEEECGGGGGCTTCCEEESCCGGGGGTCCSBSTTSBCTTCCHHH--HHHHH-THHHHHHTCCCGGGG
T ss_pred CCEEEEEecCcccCCcCChHHhcCccceEEECcCCccccCCccccccccccCchHHH--HHHHH-hhHHHhhhccCchhh
Confidence 47889999999999999999999999999999999762 2 344433 45666 777788777776665
Q ss_pred ccCC-CCCcEEEcccCcccccCCcccccccccccEEEcc--cCccCCCCCccccCCCCccEEEccCCcCCCC--------
Q 045553 178 FGQS-PGFQVVSLSFNLLSGSVPEEFGDNCVSLEHILLA--ANSLTGSIPPSLGNCTELRSLLLSSNMLQGD-------- 246 (1082)
Q Consensus 178 ~~~l-~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~L~--~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~-------- 246 (1082)
+..+ ..+..+++....+.. .....++.+.+. .|++++ +|..++++++|++|+|++|++++.
T Consensus 158 ~~~~~~~l~~~~l~~~~~~~-------~~~~~l~~l~l~~~~n~l~~-ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~ 229 (636)
T 4eco_A 158 FSDLIKDCINSDPQQKSIKK-------SSRITLKDTQIGQLSNNITF-VSKAVMRLTKLRQFYMGNSPFVAENICEAWEN 229 (636)
T ss_dssp SCHHHHHHHHHCTTSCCCCC-------CCCCCCCTTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSC
T ss_pred HHHHHHHHhhcCcccccccc-------ccccchhhhhhccccCCCcc-CCHHHhcccCCCEEECcCCccccccccccccc
Confidence 5422 223333333322220 011223333332 577776 777788888888888888888764
Q ss_pred ---------cCcccc--CCCCCCEEeCCCCcCcccCCccccCCCCCcEEEeccccCCcccccCCCCCCcccccCCCcccc
Q 045553 247 ---------IPSSFG--QLVNLEVLDLSRNFLSGIVPSELGMCKQLKVLVLRNDYGPLYSREHGDLPIQPVVDGGEDYNF 315 (1082)
Q Consensus 247 ---------~p~~~~--~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~n~~~~~~~~~~~l~~~~~~~~~~~~n~ 315 (1082)
+|..++ ++++|++|+|++|++.+.+|..|+++++|++|++++| .
T Consensus 230 ~~~~~~~~~ip~~l~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n-------------------------~ 284 (636)
T 4eco_A 230 ENSEYAQQYKTEDLKWDNLKDLTDVEVYNCPNLTKLPTFLKALPEMQLINVACN-------------------------R 284 (636)
T ss_dssp TTSHHHHHHTTSCCCGGGCTTCCEEEEECCTTCSSCCTTTTTCSSCCEEECTTC-------------------------T
T ss_pred cccchhcccCchhhhhcccCCCCEEEecCCcCCccChHHHhcCCCCCEEECcCC-------------------------C
Confidence 777777 7778888888888777777777777777777777663 3
Q ss_pred -cCC-CCCccccCC------CCCcEEEcCCCcccCCCCc--ccccccCCCeEEcCCccccCCCCccccCCCCCCEEecCC
Q 045553 316 -FDG-GLPDSITRL------PNLRVFWAPNLNLEGIFPQ--NWELCSKLEMLNLAHNFFTGQIPASLGNCKSLYFLDLSS 385 (1082)
Q Consensus 316 -~~~-~~p~~l~~l------~~L~~L~l~~n~l~~~~~~--~l~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~Ls~ 385 (1082)
+++ .+|..++.+ ++|++|++++|++. .+|. .+..+++|++|+|++|+++|.+| .+..+++|+.|+|++
T Consensus 285 ~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~-~ip~~~~l~~l~~L~~L~L~~N~l~g~ip-~~~~l~~L~~L~L~~ 362 (636)
T 4eco_A 285 GISGEQLKDDWQALADAPVGEKIQIIYIGYNNLK-TFPVETSLQKMKKLGMLECLYNQLEGKLP-AFGSEIKLASLNLAY 362 (636)
T ss_dssp TSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCS-SCCCHHHHTTCTTCCEEECCSCCCEEECC-CCEEEEEESEEECCS
T ss_pred CCccccchHHHHhhhccccCCCCCEEECCCCcCC-ccCchhhhccCCCCCEEeCcCCcCccchh-hhCCCCCCCEEECCC
Confidence 445 566666665 67777777777777 4555 67777777777777777776666 667777777777777
Q ss_pred CcCcccCCCCcccCc-ccEEEecCCcceecCCCCCCcccccccccccccceeeeeecccccccccccCcCCCCCCCCCce
Q 045553 386 NNLTGLLPEEVSVPC-MAVFNVSQNLLSGEIPRISHSECSKMSVNWSMSQVDLIGFYTAFFYENALTSCAPFSSPSNGLF 464 (1082)
Q Consensus 386 N~l~~~~p~~~~l~~-L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 464 (1082)
|+++..+.....+++ |+.|++++|.++ .+|
T Consensus 363 N~l~~lp~~l~~l~~~L~~L~Ls~N~l~-~lp------------------------------------------------ 393 (636)
T 4eco_A 363 NQITEIPANFCGFTEQVENLSFAHNKLK-YIP------------------------------------------------ 393 (636)
T ss_dssp SEEEECCTTSEEECTTCCEEECCSSCCS-SCC------------------------------------------------
T ss_pred CccccccHhhhhhcccCcEEEccCCcCc-ccc------------------------------------------------
Confidence 777733333335666 777777766665 222
Q ss_pred eEeeccCCcccCCCCCccccCCCccccccceeeeccCCCccccCCcccccccCCceeEEEccCCcccccCCccccc----
Q 045553 465 ILHDFSNNLFTGPVPPFLIDSDSLSSRPYYGFWLSGNSLKGNLSTYPFDLCLSLDGLIFDIGNNKLIGEVPSDMGS---- 540 (1082)
Q Consensus 465 ~~~~l~~n~~~g~~p~~~~~~~~l~~~~~~~~~~~~n~~~~~l~~~p~~~~~~~~l~~l~l~~n~l~~~ip~~~~~---- 540 (1082)
..+. .....++++|++++|++.+.+|..+..
T Consensus 394 ---------------~~~~------------------------------~~~l~~L~~L~Ls~N~l~~~~p~~l~~~~~~ 428 (636)
T 4eco_A 394 ---------------NIFD------------------------------AKSVSVMSAIDFSYNEIGSVDGKNFDPLDPT 428 (636)
T ss_dssp ---------------SCCC------------------------------TTCSSCEEEEECCSSCTTTTTTCSSCTTCSS
T ss_pred ---------------hhhh------------------------------hcccCccCEEECcCCcCCCcchhhhcccccc
Confidence 1110 011235689999999999888877651
Q ss_pred --cCCcccEEEccCCcccccCccccCCCCCCCEEEccCCCCCCCCcccccCCC-------CCCEEEcCCCcCCccCchhh
Q 045553 541 --HCKCMKFLSMAGNEFVGLIPQSFTNFDSLRNLNLSRNHLQGPLPSYINKME-------DLKFLSLSLNNFTGAIPWEL 611 (1082)
Q Consensus 541 --~~~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~-------~L~~L~Ls~N~l~~~~p~~~ 611 (1082)
.+++|++|+|++|+|+.+.+..|..+++|++|+|++|+++.+.+..+..+. +|++|+|++|+++ .+|..+
T Consensus 429 ~~~~~~L~~L~Ls~N~l~~lp~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~ 507 (636)
T 4eco_A 429 PFKGINVSSINLSNNQISKFPKELFSTGSPLSSINLMGNMLTEIPKNSLKDENENFKNTYLLTSIDLRFNKLT-KLSDDF 507 (636)
T ss_dssp CCCCCCEEEEECCSSCCCSCCTHHHHTTCCCSEEECCSSCCSBCCSSSSEETTEECTTGGGCCEEECCSSCCC-BCCGGG
T ss_pred cccCCCCCEEECcCCccCcCCHHHHccCCCCCEEECCCCCCCCcCHHHhccccccccccCCccEEECcCCcCC-ccChhh
Confidence 345799999999999977777788899999999999999944444444333 9999999999999 788888
Q ss_pred h--cCcccchhhccCcccCCCCCccccCCcccceecc------cCcccCCCCCCCCCCCCcccEEeccCCccccCCCCC-
Q 045553 612 T--QLASLEVLELSANSLSGEIPSEFSKLEHLNVLRL------DHNNLTGRIPPGFGTRSSLSIFDVSFNNLSGSAPRN- 682 (1082)
Q Consensus 612 ~--~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L------~~N~l~~~~p~~~~~l~~L~~l~ls~N~l~~~~p~~- 682 (1082)
. .+++|+.|+|++|+|++ +|..+..+++|+.|+| ++|++.+.+|..+..+++|+.|++++|++ +.+|..
T Consensus 508 ~~~~l~~L~~L~Ls~N~l~~-ip~~~~~l~~L~~L~Ls~N~~ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l-~~ip~~~ 585 (636)
T 4eco_A 508 RATTLPYLVGIDLSYNSFSK-FPTQPLNSSTLKGFGIRNQRDAQGNRTLREWPEGITLCPSLTQLQIGSNDI-RKVNEKI 585 (636)
T ss_dssp STTTCTTCCEEECCSSCCSS-CCCGGGGCSSCCEEECCSCBCTTCCBCCCCCCTTGGGCSSCCEEECCSSCC-CBCCSCC
T ss_pred hhccCCCcCEEECCCCCCCC-cChhhhcCCCCCEEECCCCcccccCcccccChHHHhcCCCCCEEECCCCcC-CccCHhH
Confidence 7 99999999999999997 8999999999999999 56889999999999999999999999999 788864
Q ss_pred -cccccccCCCCCCCC
Q 045553 683 -SLIKCENVQGNPNLQ 697 (1082)
Q Consensus 683 -~~~~~~~~~~Np~~c 697 (1082)
..+....+.+||+.|
T Consensus 586 ~~~L~~L~Ls~N~l~~ 601 (636)
T 4eco_A 586 TPNISVLDIKDNPNIS 601 (636)
T ss_dssp CTTCCEEECCSCTTCE
T ss_pred hCcCCEEECcCCCCcc
Confidence 345667889999884
No 31
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=100.00 E-value=2.8e-46 Score=410.07 Aligned_cols=247 Identities=26% Similarity=0.350 Sum_probs=201.4
Q ss_pred cCccccceecccCceEEEEEEEc----CCeEEEEEEeecCc--cccHHHHHHHHHHHhccCCCceeeEeeeeccCCeEEE
Q 045553 801 AGFNVQNCIGSGGFGATYKAEII----PGVVVAVKRLSVGR--FQGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFL 874 (1082)
Q Consensus 801 ~~~~~~~~lg~G~~g~Vy~a~~~----~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 874 (1082)
++|++.+.||+|+||+||+|+.. +++.||||++.... ......+.+|++++++++|||||++++++.+++..|+
T Consensus 24 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~i 103 (304)
T 3ubd_A 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLYL 103 (304)
T ss_dssp GGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEEETTEEEE
T ss_pred cccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEE
Confidence 46999999999999999999652 47899999996542 2234468899999999999999999999999999999
Q ss_pred EEeecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCC
Q 045553 875 IYNYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGT 954 (1082)
Q Consensus 875 V~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~ 954 (1082)
||||++||+|.++++.. ..+++..+..++.|++.||+|||++ +|+||||||+|||++.++.+||+|||+|+....
T Consensus 104 vmEy~~gg~L~~~l~~~--~~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~ 178 (304)
T 3ubd_A 104 ILDFLRGGDLFTRLSKE--VMFTEEDVKFYLAELALALDHLHSL---GIIYRDLKPENILLDEEGHIKLTDFGLSKESID 178 (304)
T ss_dssp EECCCTTCEEHHHHHHH--CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECTTSCEEEESSEEEEC---
T ss_pred EEEcCCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHeEEcCCCCEEecccccceeccC
Confidence 99999999999999874 4699999999999999999999999 999999999999999999999999999986543
Q ss_pred CCCccccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCCCccccc
Q 045553 955 SETHATTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQGRPCEFFT 1034 (1082)
Q Consensus 955 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 1034 (1082)
... .....+||+.|+|||++.+..|+.++||||+||++|||++|+.||... +..+.+..+.... .
T Consensus 179 ~~~-~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~~--------~~~~~~~~i~~~~-~----- 243 (304)
T 3ubd_A 179 HEK-KAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGK--------DRKETMTMILKAK-L----- 243 (304)
T ss_dssp --C-CCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCS--------SHHHHHHHHHHCC-C-----
T ss_pred CCc-cccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCCc--------CHHHHHHHHHcCC-C-----
Confidence 322 334578999999999999999999999999999999999999999732 3334444443321 1
Q ss_pred cccCCCCChHHHHHHHHHHHHcccCCCCCCCC-----HHHHHH
Q 045553 1035 AGLWDCGPHDDLIEMLNLAIMCTGESLSSRPS-----MRQVAQ 1072 (1082)
Q Consensus 1035 ~~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt-----~~ev~~ 1072 (1082)
..|...+.++.+++.+||+.||++||| ++|+++
T Consensus 244 -----~~p~~~s~~~~~li~~~L~~dP~~R~ta~~~~~~eil~ 281 (304)
T 3ubd_A 244 -----GMPQFLSPEAQSLLRMLFKRNPANRLGAGPDGVEEIKR 281 (304)
T ss_dssp -----CCCTTSCHHHHHHHHHHTCSSGGGSTTCSTTTHHHHHT
T ss_pred -----CCCCcCCHHHHHHHHHHcccCHHHCCCCCcCCHHHHHc
Confidence 123345568999999999999999998 467764
No 32
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=100.00 E-value=3.7e-44 Score=444.15 Aligned_cols=520 Identities=21% Similarity=0.181 Sum_probs=312.5
Q ss_pred CCCccccccccccCCCCCCEEEcccCCCcccCChhhcCCCCCCEEeCcCCCCCCCCCccccCCCCCCeEEccCccccccc
Q 045553 95 SDKLSGNLSRAIGDLTQLRVLLLAFNGFSGELPLEIGQLSLLEILDLSFNSFHGPIPPTLQNCSSLRLINLSGNQFNGTI 174 (1082)
Q Consensus 95 ~~~l~g~l~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~ 174 (1082)
.|+|++..+.+|.++++|++|+|++|+|++..|.+|+++++|++|+|++|+|++..+..|.++++|++|+|++|++++..
T Consensus 61 ~N~i~~l~~~~f~~l~~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~l~~l~~~~f~~L~~L~~L~Ls~N~l~~l~ 140 (635)
T 4g8a_A 61 FNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLE 140 (635)
T ss_dssp TSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECGGGGTTCTTCCEEECTTSCCCCST
T ss_pred CCCCCCCCHHHHhCCCCCCEEECCCCcCCCcChhHhcCCCCCCEEEccCCcCCCCCHHHhcCCCCCCEEECCCCcCCCCC
Confidence 34444444444555555555555555555444444555555555555555555333344555555555555555555444
Q ss_pred CccccCCCCCcEEEcccCccccc-CCcccccccccccEEEcccCccCCCCCccccCCCCc----cEEEccCCcCCCCcCc
Q 045553 175 PAFFGQSPGFQVVSLSFNLLSGS-VPEEFGDNCVSLEHILLAANSLTGSIPPSLGNCTEL----RSLLLSSNMLQGDIPS 249 (1082)
Q Consensus 175 p~~~~~l~~L~~L~L~~N~l~~~-~p~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L----~~L~L~~N~l~~~~p~ 249 (1082)
+..|+++++|++|+|++|++++. +|..+ ..+++|++|++++|++++..+..+..+.++ ..++++.|.++...+.
T Consensus 141 ~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~-~~l~~L~~L~L~~N~l~~~~~~~l~~L~~l~~~~~~~~ls~n~l~~i~~~ 219 (635)
T 4g8a_A 141 NFPIGHLKTLKELNVAHNLIQSFKLPEYF-SNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMNFIQPG 219 (635)
T ss_dssp TCCCTTCTTCCEEECCSSCCCCCCCCGGG-GGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCCEEECTTCCCCEECTT
T ss_pred hhhhhcCcccCeeccccCccccCCCchhh-ccchhhhhhcccCccccccccccccchhhhhhhhhhhhcccCcccccCcc
Confidence 44455555555555555555422 22222 234555555555555554444444333222 2444555555432222
Q ss_pred cccCCCCCCEEeCCCCcCcc-cCCccccCCCCCcEEEeccccCCcccccCC-CC-CCccccc---CC---CcccccCCCC
Q 045553 250 SFGQLVNLEVLDLSRNFLSG-IVPSELGMCKQLKVLVLRNDYGPLYSREHG-DL-PIQPVVD---GG---EDYNFFDGGL 320 (1082)
Q Consensus 250 ~~~~l~~L~~L~Ls~N~l~~-~~p~~l~~l~~L~~L~l~~n~~~~~~~~~~-~l-~~~~~~~---~~---~~~n~~~~~~ 320 (1082)
.+ ....++.|++.+|.... ..+..+..+..++...+..+.......... .. ....... .. ..........
T Consensus 220 ~~-~~~~~~~l~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~ 298 (635)
T 4g8a_A 220 AF-KEIRLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLAYLDYYLDGI 298 (635)
T ss_dssp TT-TTCEEEEEEEESCCSSHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCTTTTGGGGGSEEEEEEEECCCSCEEEC
T ss_pred cc-cchhhhhhhhhcccccccccchhhcCCcccccccccccccccccccccccccccccccchhhhhhhhhhhcccccch
Confidence 22 22334444554443321 122334445555544443221111000000 00 0000000 00 0011122234
Q ss_pred CccccCCCCCcEEEcCCCcccCCCCcccccccCCCeEEcCCccccCCCCccccCCCCCCEEecCCCcCcccCCCCcccCc
Q 045553 321 PDSITRLPNLRVFWAPNLNLEGIFPQNWELCSKLEMLNLAHNFFTGQIPASLGNCKSLYFLDLSSNNLTGLLPEEVSVPC 400 (1082)
Q Consensus 321 p~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~l~~ 400 (1082)
+..+..+.+++.+.+.++.+.... .+....+|+.|++.+|.+.+..+ ..++.|+.+++++|.+... +....+++
T Consensus 299 ~~~~~~~~~l~~l~~~~~~~~~~~--~~~~~~~L~~L~l~~~~~~~~~~---~~l~~L~~l~l~~n~~~~~-~~~~~l~~ 372 (635)
T 4g8a_A 299 IDLFNCLTNVSSFSLVSVTIERVK--DFSYNFGWQHLELVNCKFGQFPT---LKLKSLKRLTFTSNKGGNA-FSEVDLPS 372 (635)
T ss_dssp TTTTGGGTTCSEEEEESCEEEECG--GGGSCCCCSEEEEESCEESSCCC---CBCTTCCEEEEESCCSCCB-CCCCBCTT
T ss_pred hhhhhhhccccccccccccccccc--ccccchhhhhhhcccccccCcCc---ccchhhhhcccccccCCCC-cccccccc
Confidence 556677888999999999887754 35667899999999999985443 3467899999999988754 44557899
Q ss_pred ccEEEecCCcceecCCCCCCcccccccccccccceeeeeecccccccccccCcCCCCCCCCCceeEeeccCCcccCCCCC
Q 045553 401 MAVFNVSQNLLSGEIPRISHSECSKMSVNWSMSQVDLIGFYTAFFYENALTSCAPFSSPSNGLFILHDFSNNLFTGPVPP 480 (1082)
Q Consensus 401 L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~n~~~g~~p~ 480 (1082)
|+.|++++|.+....+.. . .. ..+. -....+++.|...
T Consensus 373 L~~L~ls~n~l~~~~~~~------~-~~----------------------~~~~--------~L~~L~~~~~~~~----- 410 (635)
T 4g8a_A 373 LEFLDLSRNGLSFKGCCS------Q-SD----------------------FGTI--------SLKYLDLSFNGVI----- 410 (635)
T ss_dssp CCEEECCSSCCBEEEECC------H-HH----------------------HSCS--------CCCEEECCSCSEE-----
T ss_pred cccchhhccccccccccc------c-ch----------------------hhhh--------hhhhhhccccccc-----
Confidence 999999999886321100 0 00 0000 0011222222221
Q ss_pred ccccCCCccccccceeeeccCCCccccCCcccccccCCceeEEEccCCcccccCCccccccCCcccEEEccCCcccccCc
Q 045553 481 FLIDSDSLSSRPYYGFWLSGNSLKGNLSTYPFDLCLSLDGLIFDIGNNKLIGEVPSDMGSHCKCMKFLSMAGNEFVGLIP 560 (1082)
Q Consensus 481 ~~~~~~~l~~~~~~~~~~~~n~~~~~l~~~p~~~~~~~~l~~l~l~~n~l~~~ip~~~~~~~~~L~~L~L~~N~i~~~~~ 560 (1082)
..+.......+++.+++++|+..+..+...+..+++++.++++.|++.+..+
T Consensus 411 ----------------------------~~~~~~~~l~~L~~l~l~~~~~~~~~~~~~~~~l~~l~~l~ls~n~l~~~~~ 462 (635)
T 4g8a_A 411 ----------------------------TMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFN 462 (635)
T ss_dssp ----------------------------EECSCCTTCTTCCEEECTTSEEESTTSSCTTTTCTTCCEEECTTSCCEECCT
T ss_pred ----------------------------cccccccccccccchhhhhccccccccccccccccccccccccccccccccc
Confidence 1223344556677888888888878888888888889999999999988888
Q ss_pred cccCCCCCCCEEEccCCCC-CCCCcccccCCCCCCEEEcCCCcCCccCchhhhcCcccchhhccCcccCCCCCccccCCc
Q 045553 561 QSFTNFDSLRNLNLSRNHL-QGPLPSYINKMEDLKFLSLSLNNFTGAIPWELTQLASLEVLELSANSLSGEIPSEFSKLE 639 (1082)
Q Consensus 561 ~~~~~l~~L~~L~L~~N~l-~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~ 639 (1082)
..+..++.|++|+|++|.+ .+..|..|..+++|++|+|++|+|++..|..|.++++|++|+|++|+|++..|..|..++
T Consensus 463 ~~~~~~~~L~~L~Ls~N~~~~~~~~~~~~~l~~L~~L~Ls~N~L~~l~~~~f~~l~~L~~L~Ls~N~l~~l~~~~~~~l~ 542 (635)
T 4g8a_A 463 GIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLN 542 (635)
T ss_dssp TTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCBCCCGGGTTCT
T ss_pred cccccchhhhhhhhhhcccccccCchhhhhccccCEEECCCCccCCcChHHHcCCCCCCEEECCCCcCCCCChhHHhCCC
Confidence 8888889999999998874 345678888889999999999999988888898999999999999999888888888899
Q ss_pred ccceecccCcccCCCCCCCCCCC-CcccEEeccCCccccCCCCCcccccccCCCCCCCCCCCCCCCCCcccccCC
Q 045553 640 HLNVLRLDHNNLTGRIPPGFGTR-SSLSIFDVSFNNLSGSAPRNSLIKCENVQGNPNLQLCHTDPSSSEWERQHS 713 (1082)
Q Consensus 640 ~L~~L~L~~N~l~~~~p~~~~~l-~~L~~l~ls~N~l~~~~p~~~~~~~~~~~~Np~~c~c~~~~~~~~~~~~~~ 713 (1082)
+|++|+|++|+|++.+|..|..+ ++|++|+|+ +|||.|+|. ..|...|.+...
T Consensus 543 ~L~~L~Ls~N~l~~~~~~~l~~l~~~L~~L~L~--------------------~Np~~C~C~-~~~~~~wl~~~~ 596 (635)
T 4g8a_A 543 SLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLT--------------------QNDFACTCE-HQSFLQWIKDQR 596 (635)
T ss_dssp TCCEEECTTSCCCBCCSSCTTCCCTTCCEEECT--------------------TCCBCCSGG-GHHHHHHHHHTT
T ss_pred CCCEEECCCCcCCCCCHHHHHhhhCcCCEEEee--------------------CCCCcccCC-cHHHHHHHHhCC
Confidence 99999999999998888888887 578888875 455668887 455666665443
No 33
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=100.00 E-value=2.1e-45 Score=443.63 Aligned_cols=159 Identities=26% Similarity=0.264 Sum_probs=119.9
Q ss_pred CceeEEEccCCcccccCCccccccCCcccEEEccCCcccc--cCccccCCCCCCCEEEccCCCCCCCCcc-cccCCCCCC
Q 045553 518 LDGLIFDIGNNKLIGEVPSDMGSHCKCMKFLSMAGNEFVG--LIPQSFTNFDSLRNLNLSRNHLQGPLPS-YINKMEDLK 594 (1082)
Q Consensus 518 ~~l~~l~l~~n~l~~~ip~~~~~~~~~L~~L~L~~N~i~~--~~~~~~~~l~~L~~L~L~~N~l~~~~p~-~~~~l~~L~ 594 (1082)
.++++|++++|++.+.+|..+ ..+++|++|++++|+|++ .+|..|..+++|++|+|++|.+++.+|. .|..+++|+
T Consensus 324 ~~L~~L~Ls~n~l~~~~~~~~-~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L~ 402 (520)
T 2z7x_B 324 SPFLHLDFSNNLLTDTVFENC-GHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSYDEKKGDCSWTKSLL 402 (520)
T ss_dssp CCCCEEECCSSCCCTTTTTTC-CCCSSCCEEECCSSCCCBHHHHHHHHTTCTTCCEEECCSSCCBCCGGGCSCCCCTTCC
T ss_pred CcccEEEeECCccChhhhhhh-ccCCCCCEEEccCCccCccccchHHHhhCCCCCEEECCCCcCCcccccchhccCccCC
Confidence 455788888888887677665 456778888888888886 4456788888888888888888874554 477788888
Q ss_pred EEEcCCCcCCccCchhhhcCcccchhhccCcccCCCCCccccCCcccceecccCcccCCCCCCCCCCCCcccEEeccCCc
Q 045553 595 FLSLSLNNFTGAIPWELTQLASLEVLELSANSLSGEIPSEFSKLEHLNVLRLDHNNLTGRIPPGFGTRSSLSIFDVSFNN 674 (1082)
Q Consensus 595 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~l~ls~N~ 674 (1082)
+|+|++|++++.+|..+. ++|++|+|++|+|+ .+|..+..+++|++|+|++|+|++..+..|..+++|+.|++++|+
T Consensus 403 ~L~Ls~N~l~~~~~~~l~--~~L~~L~Ls~N~l~-~ip~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~l~~N~ 479 (520)
T 2z7x_B 403 SLNMSSNILTDTIFRCLP--PRIKVLDLHSNKIK-SIPKQVVKLEALQELNVASNQLKSVPDGIFDRLTSLQKIWLHTNP 479 (520)
T ss_dssp EEECCSSCCCGGGGGSCC--TTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred EEECcCCCCCcchhhhhc--ccCCEEECCCCccc-ccchhhhcCCCCCEEECCCCcCCccCHHHhccCCcccEEECcCCC
Confidence 888888888877766654 67888888888888 677777788888888888888884333347888888888887777
Q ss_pred cccCCC
Q 045553 675 LSGSAP 680 (1082)
Q Consensus 675 l~~~~p 680 (1082)
++|.++
T Consensus 480 ~~c~c~ 485 (520)
T 2z7x_B 480 WDCSCP 485 (520)
T ss_dssp BCCCHH
T ss_pred CcccCC
Confidence 664433
No 34
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=100.00 E-value=2.5e-45 Score=442.99 Aligned_cols=462 Identities=20% Similarity=0.230 Sum_probs=327.0
Q ss_pred CEEEcccCCCcccCChhhcCCCCCCEEeCcCCCCCCCCCccccCCCCCCeEEccCcccccccCccccCCCCCcEEEcccC
Q 045553 113 RVLLLAFNGFSGELPLEIGQLSLLEILDLSFNSFHGPIPPTLQNCSSLRLINLSGNQFNGTIPAFFGQSPGFQVVSLSFN 192 (1082)
Q Consensus 113 ~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N 192 (1082)
++|++++|+++ .+|..+. ++|++|+|++|.+++..|..|.++++|++|+|++|++++..|..|+++++|++|+|++|
T Consensus 3 ~~l~ls~n~l~-~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N 79 (520)
T 2z7x_B 3 FLVDRSKNGLI-HVPKDLS--QKTTILNISQNYISELWTSDILSLSKLRILIISHNRIQYLDISVFKFNQELEYLDLSHN 79 (520)
T ss_dssp CEEECTTSCCS-SCCCSCC--TTCSEEECCSSCCCCCCHHHHTTCTTCCEEECCSSCCCEEEGGGGTTCTTCCEEECCSS
T ss_pred ceEecCCCCcc-ccccccc--ccccEEECCCCcccccChhhccccccccEEecCCCccCCcChHHhhcccCCCEEecCCC
Confidence 45677777776 5665554 67777777777777655666777777777777777777666677777777777777777
Q ss_pred cccccCCcccccccccccEEEcccCccCC-CCCccccCCCCccEEEccCCcCCCCcCccccCCCCC--CEEeCCCCcC--
Q 045553 193 LLSGSVPEEFGDNCVSLEHILLAANSLTG-SIPPSLGNCTELRSLLLSSNMLQGDIPSSFGQLVNL--EVLDLSRNFL-- 267 (1082)
Q Consensus 193 ~l~~~~p~~~~~~l~~L~~L~L~~N~l~~-~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L--~~L~Ls~N~l-- 267 (1082)
+++ .+|.. .+++|++|+|++|++++ .+|..++++++|++|++++|++++ ..+..+++| ++|++++|.+
T Consensus 80 ~l~-~lp~~---~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~L~~n~l~~---~~~~~l~~L~L~~L~l~~n~l~~ 152 (520)
T 2z7x_B 80 KLV-KISCH---PTVNLKHLDLSFNAFDALPICKEFGNMSQLKFLGLSTTHLEK---SSVLPIAHLNISKVLLVLGETYG 152 (520)
T ss_dssp CCC-EEECC---CCCCCSEEECCSSCCSSCCCCGGGGGCTTCCEEEEEESSCCG---GGGGGGTTSCEEEEEEEECTTTT
T ss_pred cee-ecCcc---ccCCccEEeccCCccccccchhhhccCCcceEEEecCcccch---hhccccccceeeEEEeecccccc
Confidence 776 56655 46677777777777765 356677777777777777777764 345556666 7777777777
Q ss_pred cccCCccccCCCC-CcEEEeccccCCcccccCCCCCCcccccCCCcccccCCC-CCccccCCCCCcEEEcCCCc------
Q 045553 268 SGIVPSELGMCKQ-LKVLVLRNDYGPLYSREHGDLPIQPVVDGGEDYNFFDGG-LPDSITRLPNLRVFWAPNLN------ 339 (1082)
Q Consensus 268 ~~~~p~~l~~l~~-L~~L~l~~n~~~~~~~~~~~l~~~~~~~~~~~~n~~~~~-~p~~l~~l~~L~~L~l~~n~------ 339 (1082)
.+..|..+..++. ...+++++ |.+.+. .+..+..+++|+.|++++|.
T Consensus 153 ~~~~~~~l~~l~~~~l~l~l~~-------------------------n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~~ 207 (520)
T 2z7x_B 153 EKEDPEGLQDFNTESLHIVFPT-------------------------NKEFHFILDVSVKTVANLELSNIKCVLEDNKCS 207 (520)
T ss_dssp SSCCTTTTTTCCEEEEEEECCS-------------------------SSCCCCCCCCCCTTCSEEEECCEEECCSTTTTH
T ss_pred cccccccccccccceEEEEecc-------------------------Ccchhhhhhhhhhcccceeeccccccccccccc
Confidence 6666666665552 12223333 222222 23455667777777777776
Q ss_pred -ccCCCCcccccccCCCeEEcCCccccCCCCcccc---CCCCCCEEecCCCcCcccCCCCc------ccCcccEEEecCC
Q 045553 340 -LEGIFPQNWELCSKLEMLNLAHNFFTGQIPASLG---NCKSLYFLDLSSNNLTGLLPEEV------SVPCMAVFNVSQN 409 (1082)
Q Consensus 340 -l~~~~~~~l~~l~~L~~L~Ls~N~i~~~~p~~~~---~l~~L~~L~Ls~N~l~~~~p~~~------~l~~L~~L~l~~N 409 (1082)
+.+..+ .+..+++|+.|++++|.+++..+..+. .+++|+.|++++|++++.+|..+ .++.|+.+++++|
T Consensus 208 ~~~~~~~-~l~~l~~L~~L~l~~~~l~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~~~~~~l~~L~~l~l~~n 286 (520)
T 2z7x_B 208 YFLSILA-KLQTNPKLSNLTLNNIETTWNSFIRILQLVWHTTVWYFSISNVKLQGQLDFRDFDYSGTSLKALSIHQVVSD 286 (520)
T ss_dssp HHHHHHH-GGGGCTTCCEEEEEEEEEEHHHHHHHHHHHHTSSCSEEEEEEEEEESCCCCCCCCCCSCCCCEEEEEEEEEC
T ss_pred eeecchh-hhccccchhhccccccccCHHHHHHHHHHhhhCcccEEEeecccccCccccchhhcccccCceeEecccccc
Confidence 555444 667777888888887777653322221 14578888888888877666653 4677777777777
Q ss_pred cceecCCCCCCcccccccccccccceeeeeecccccccccccCcCCCCCCCCCceeEeeccCCcccCCCCCccccCCCcc
Q 045553 410 LLSGEIPRISHSECSKMSVNWSMSQVDLIGFYTAFFYENALTSCAPFSSPSNGLFILHDFSNNLFTGPVPPFLIDSDSLS 489 (1082)
Q Consensus 410 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~n~~~g~~p~~~~~~~~l~ 489 (1082)
.+ .+|.- .+
T Consensus 287 ~~--~~p~~--------------------------------------------------------------~~------- 295 (520)
T 2z7x_B 287 VF--GFPQS--------------------------------------------------------------YI------- 295 (520)
T ss_dssp CC--CSCTH--------------------------------------------------------------HH-------
T ss_pred ce--ecchh--------------------------------------------------------------hh-------
Confidence 65 22210 00
Q ss_pred ccccceeeeccCCCccccCCcccccccCCceeEEEccCCcccccCCccccccCCcccEEEccCCcccccCccccCCCCCC
Q 045553 490 SRPYYGFWLSGNSLKGNLSTYPFDLCLSLDGLIFDIGNNKLIGEVPSDMGSHCKCMKFLSMAGNEFVGLIPQSFTNFDSL 569 (1082)
Q Consensus 490 ~~~~~~~~~~~n~~~~~l~~~p~~~~~~~~l~~l~l~~n~l~~~ip~~~~~~~~~L~~L~L~~N~i~~~~~~~~~~l~~L 569 (1082)
..+....+++.|++++|++.+ ++ .+..+++|++|++++|++++..|..|..+++|
T Consensus 296 ----------------------~~~~~~~~L~~L~l~~n~l~~-~~--~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L 350 (520)
T 2z7x_B 296 ----------------------YEIFSNMNIKNFTVSGTRMVH-ML--CPSKISPFLHLDFSNNLLTDTVFENCGHLTEL 350 (520)
T ss_dssp ----------------------HHHHHTCCCSEEEEESSCCCC-CC--CCSSCCCCCEEECCSSCCCTTTTTTCCCCSSC
T ss_pred ----------------------hcccccCceeEEEcCCCcccc-cc--chhhCCcccEEEeECCccChhhhhhhccCCCC
Confidence 000011234678888887652 22 22567889999999999999999999999999
Q ss_pred CEEEccCCCCCC--CCcccccCCCCCCEEEcCCCcCCccCchh-hhcCcccchhhccCcccCCCCCccccCCcccceecc
Q 045553 570 RNLNLSRNHLQG--PLPSYINKMEDLKFLSLSLNNFTGAIPWE-LTQLASLEVLELSANSLSGEIPSEFSKLEHLNVLRL 646 (1082)
Q Consensus 570 ~~L~L~~N~l~~--~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~-~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 646 (1082)
++|+|++|++++ .+|..|..+++|++|+|++|++++.+|.. |..+++|++|+|++|++++.+|..+. ++|+.|+|
T Consensus 351 ~~L~L~~N~l~~l~~~~~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~--~~L~~L~L 428 (520)
T 2z7x_B 351 ETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSYDEKKGDCSWTKSLLSLNMSSNILTDTIFRCLP--PRIKVLDL 428 (520)
T ss_dssp CEEECCSSCCCBHHHHHHHHTTCTTCCEEECCSSCCBCCGGGCSCCCCTTCCEEECCSSCCCGGGGGSCC--TTCCEEEC
T ss_pred CEEEccCCccCccccchHHHhhCCCCCEEECCCCcCCcccccchhccCccCCEEECcCCCCCcchhhhhc--ccCCEEEC
Confidence 999999999996 45678999999999999999999856654 88999999999999999988777665 79999999
Q ss_pred cCcccCCCCCCCCCCCCcccEEeccCCccccCCCCC-----cccccccCCCCCCCCCCCCCCCC-Cccccc
Q 045553 647 DHNNLTGRIPPGFGTRSSLSIFDVSFNNLSGSAPRN-----SLIKCENVQGNPNLQLCHTDPSS-SEWERQ 711 (1082)
Q Consensus 647 ~~N~l~~~~p~~~~~l~~L~~l~ls~N~l~~~~p~~-----~~~~~~~~~~Np~~c~c~~~~~~-~~~~~~ 711 (1082)
++|+|+ .+|..+..+++|+.|++++|+++ .+|.. ..+....+.+||+.|+|.. .+. ..|...
T Consensus 429 s~N~l~-~ip~~~~~l~~L~~L~L~~N~l~-~l~~~~~~~l~~L~~L~l~~N~~~c~c~~-~~~~~~~~~~ 496 (520)
T 2z7x_B 429 HSNKIK-SIPKQVVKLEALQELNVASNQLK-SVPDGIFDRLTSLQKIWLHTNPWDCSCPR-IDYLSRWLNK 496 (520)
T ss_dssp CSSCCC-CCCGGGGGCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEEECCSSCBCCCHHH-HHHHHHHHHH
T ss_pred CCCccc-ccchhhhcCCCCCEEECCCCcCC-ccCHHHhccCCcccEEECcCCCCcccCCc-hHHHHHHHHh
Confidence 999999 78888889999999999999999 46654 2345678899999999973 333 556543
No 35
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*
Probab=100.00 E-value=3.1e-44 Score=396.04 Aligned_cols=249 Identities=23% Similarity=0.384 Sum_probs=190.3
Q ss_pred cCccccceecccCceEEEEEEEc-CCeEEEEEEeecCcc-ccHHHHHHHHHHHhccCCCceeeEeeeeccCC--------
Q 045553 801 AGFNVQNCIGSGGFGATYKAEII-PGVVVAVKRLSVGRF-QGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEA-------- 870 (1082)
Q Consensus 801 ~~~~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~-------- 870 (1082)
.+|++.+.||+|+||+||+|+.. +|+.||||++..... ...+.+.+|++++++++|||||++++++.+.+
T Consensus 5 ~dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~~ 84 (299)
T 4g31_A 5 TDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPS 84 (299)
T ss_dssp HHEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECSSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC--------
T ss_pred hhCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCcccccccc
Confidence 45899999999999999999754 689999999975543 34567899999999999999999999886543
Q ss_pred ----eEEEEEeecCCCCHHHHHhhCCC-CCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEee
Q 045553 871 ----EMFLIYNYLPGGNLEKFIQDRPR-RTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSD 945 (1082)
Q Consensus 871 ----~~~lV~E~~~~gsL~~~l~~~~~-~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~D 945 (1082)
..|+||||+++|+|.++++.... ...++..++.++.||+.||+|||++ +|+||||||+|||++.++.+||+|
T Consensus 85 ~~~~~l~ivmE~~~gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~~al~ylH~~---~IiHRDlKp~NILl~~~~~vKl~D 161 (299)
T 4g31_A 85 SPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHSK---GLMHRDLKPSNIFFTMDDVVKVGD 161 (299)
T ss_dssp --CEEEEEEEECCCSCCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECC
T ss_pred CCCcEEEEEEecCCCCcHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHHHC---cCccccCcHHHeEECCCCcEEEcc
Confidence 36999999999999999987532 3456777899999999999999999 999999999999999999999999
Q ss_pred cccceecCCCCCc-----------cccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCc
Q 045553 946 FGLARLLGTSETH-----------ATTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGF 1014 (1082)
Q Consensus 946 fGla~~~~~~~~~-----------~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~ 1014 (1082)
||+|+.+...... .....+||+.|||||++.+..|+.++||||+||++|||++ ||... .
T Consensus 162 FGla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell~---Pf~~~-------~ 231 (299)
T 4g31_A 162 FGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFSTQ-------M 231 (299)
T ss_dssp CCCC--------------------------CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHS---CCSSH-------H
T ss_pred CccceecCCCccccccccccccccccCCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHcc---CCCCc-------c
Confidence 9999877543221 2234679999999999999999999999999999999996 66421 1
Q ss_pred cHHHHHHHHHhcCCCccccccccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 045553 1015 NIVAWASMLLLQGRPCEFFTAGLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQ 1072 (1082)
Q Consensus 1015 ~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~ 1072 (1082)
.....+.. ......... .......+..++.+|++.||++|||+.|+++
T Consensus 232 ~~~~~~~~-~~~~~~p~~---------~~~~~~~~~~li~~~L~~dP~~Rps~~eil~ 279 (299)
T 4g31_A 232 ERVRTLTD-VRNLKFPPL---------FTQKYPCEYVMVQDMLSPSPMERPEAINIIE 279 (299)
T ss_dssp HHHHHHHH-HHTTCCCHH---------HHHHCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred HHHHHHHH-HhcCCCCCC---------CcccCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 11111111 222221111 1223345678999999999999999999987
No 36
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=100.00 E-value=9.8e-44 Score=443.64 Aligned_cols=451 Identities=20% Similarity=0.223 Sum_probs=349.0
Q ss_pred CCCCEEEcccCCCcccCChhhcCCCCCCEEeC-cCCCCCCCCCccccCC----CCCC--eEE----------ccCccccc
Q 045553 110 TQLRVLLLAFNGFSGELPLEIGQLSLLEILDL-SFNSFHGPIPPTLQNC----SSLR--LIN----------LSGNQFNG 172 (1082)
Q Consensus 110 ~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L-s~n~l~~~~p~~l~~l----~~L~--~L~----------Ls~N~l~~ 172 (1082)
.+++.|+|++|++.|.+|++|++|++|++|+| ++|.++|..|-..... ..++ .+. .....+.+
T Consensus 323 ~~V~~L~Ls~~~L~G~ip~~l~~L~~L~~LdLss~N~lsG~~~~~~~~~~~~l~~~~l~~lr~~~~~~~l~~~~~~~~s~ 402 (876)
T 4ecn_A 323 GRVTGLSLAGFGAKGRVPDAIGQLTELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRIRMHYKKMFLDYDQRLNLSD 402 (876)
T ss_dssp SCEEEEECTTTCCEEEECGGGGGCTTCCEEESCCTTHHHHTTCBTTBCCCSSCCHHHHHHHHTHHHHHHTCCCGGGGSCH
T ss_pred CCEEEEECccCCCCCcCchHHhccccceEeeecccccccccccccccccccccchhHHHHHHHhhhhhhhccCcchhhhH
Confidence 57888899999998888988999999999999 8888877644321111 0000 000 00001111
Q ss_pred c-----------cCccccCCCCCcEEEccc--CcccccCCcccccccccccEEEcccCccCC-CCCccccCCCCccEEEc
Q 045553 173 T-----------IPAFFGQSPGFQVVSLSF--NLLSGSVPEEFGDNCVSLEHILLAANSLTG-SIPPSLGNCTELRSLLL 238 (1082)
Q Consensus 173 ~-----------~p~~~~~l~~L~~L~L~~--N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~-~~~~~~~~l~~L~~L~L 238 (1082)
. .+........++.+.+.. |++++ +|..++ .+++|++|+|++|++++ .++..+.. .
T Consensus 403 l~~~~l~~~~~~~~i~~~~~l~l~~l~l~~~~N~L~~-IP~~l~-~L~~L~~L~Ls~N~Lsg~~i~~~~~~--------~ 472 (876)
T 4ecn_A 403 LLQDAINRNPEMKPIKKDSRISLKDTQIGNLTNRITF-ISKAIQ-RLTKLQIIYFANSPFTYDNIAVDWED--------A 472 (876)
T ss_dssp HHHHHHHTCTTSCCCCCCCCCCCCTTTTTCCSCEEEE-ECGGGG-GCTTCCEEEEESCCCCGGGBSSSCSC--------T
T ss_pred HHHHHhhhCccccccccccccchhhceeccccCcccc-hhHHHh-cCCCCCEEECcCCcCCCCcccccccc--------c
Confidence 1 111112334555555554 89997 998876 69999999999999997 33333221 2
Q ss_pred cCCcCCCCcCcccc--CCCCCCEEeCCCCcCcccCCccccCCCCCcEEEeccccCCcccccCCCCCCcccccCCCccccc
Q 045553 239 SSNMLQGDIPSSFG--QLVNLEVLDLSRNFLSGIVPSELGMCKQLKVLVLRNDYGPLYSREHGDLPIQPVVDGGEDYNFF 316 (1082)
Q Consensus 239 ~~N~l~~~~p~~~~--~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~n~~~~~~~~~~~l~~~~~~~~~~~~n~~ 316 (1082)
+.|.+.+.+|..++ ++++|++|+|++|++.+.+|..|+++++|+.|++++|. .+
T Consensus 473 s~n~~~g~iP~~l~f~~L~~L~~L~Ls~N~l~~~iP~~l~~L~~L~~L~Ls~N~------------------------~l 528 (876)
T 4ecn_A 473 NSDYAKQYENEELSWSNLKDLTDVELYNCPNMTQLPDFLYDLPELQSLNIACNR------------------------GI 528 (876)
T ss_dssp TSHHHHHHTTSCCCGGGCTTCCEEEEESCTTCCSCCGGGGGCSSCCEEECTTCT------------------------TS
T ss_pred ccccccccCChhhhhccCCCCCEEECcCCCCCccChHHHhCCCCCCEEECcCCC------------------------Cc
Confidence 33667778999988 99999999999999999999999999999999998852 15
Q ss_pred CC-CCCccccCCC-------CCcEEEcCCCcccCCCCc--ccccccCCCeEEcCCccccCCCCccccCCCCCCEEecCCC
Q 045553 317 DG-GLPDSITRLP-------NLRVFWAPNLNLEGIFPQ--NWELCSKLEMLNLAHNFFTGQIPASLGNCKSLYFLDLSSN 386 (1082)
Q Consensus 317 ~~-~~p~~l~~l~-------~L~~L~l~~n~l~~~~~~--~l~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~Ls~N 386 (1082)
++ .+|..++.++ +|++|++++|++. .+|. .+..+++|+.|+|++|+++ .+| .|..+++|+.|+|++|
T Consensus 529 sg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~l~~L~~L~~L~Ls~N~l~-~lp-~~~~L~~L~~L~Ls~N 605 (876)
T 4ecn_A 529 SAAQLKADWTRLADDEDTGPKIQIFYMGYNNLE-EFPASASLQKMVKLGLLDCVHNKVR-HLE-AFGTNVKLTDLKLDYN 605 (876)
T ss_dssp CHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCC-BCCCHHHHTTCTTCCEEECTTSCCC-BCC-CCCTTSEESEEECCSS
T ss_pred ccccchHHHHhhhhcccccCCccEEEeeCCcCC-ccCChhhhhcCCCCCEEECCCCCcc-cch-hhcCCCcceEEECcCC
Confidence 55 5777666554 9999999999999 6677 8999999999999999999 888 8999999999999999
Q ss_pred cCcccCCCC-cccCc-ccEEEecCCcceecCCCCCCcccccccccccccceeeeeecccccccccccCcCCCCCCCCCce
Q 045553 387 NLTGLLPEE-VSVPC-MAVFNVSQNLLSGEIPRISHSECSKMSVNWSMSQVDLIGFYTAFFYENALTSCAPFSSPSNGLF 464 (1082)
Q Consensus 387 ~l~~~~p~~-~~l~~-L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 464 (1082)
+++ .+|.. ..+++ |+.|++++|.++ .+|..
T Consensus 606 ~l~-~lp~~l~~l~~~L~~L~Ls~N~L~-~lp~~---------------------------------------------- 637 (876)
T 4ecn_A 606 QIE-EIPEDFCAFTDQVEGLGFSHNKLK-YIPNI---------------------------------------------- 637 (876)
T ss_dssp CCS-CCCTTSCEECTTCCEEECCSSCCC-SCCSC----------------------------------------------
T ss_pred ccc-cchHHHhhccccCCEEECcCCCCC-cCchh----------------------------------------------
Confidence 999 55544 47888 999999999986 33321
Q ss_pred eEeeccCCcccCCCCCccccCCCccccccceeeeccCCCccccCCcccccccCCceeEEEccCCcccccCCccc---c-c
Q 045553 465 ILHDFSNNLFTGPVPPFLIDSDSLSSRPYYGFWLSGNSLKGNLSTYPFDLCLSLDGLIFDIGNNKLIGEVPSDM---G-S 540 (1082)
Q Consensus 465 ~~~~l~~n~~~g~~p~~~~~~~~l~~~~~~~~~~~~n~~~~~l~~~p~~~~~~~~l~~l~l~~n~l~~~ip~~~---~-~ 540 (1082)
+. .....+|+.|++++|++.+.+|... . -
T Consensus 638 -----------------~~------------------------------~~~~~~L~~L~Ls~N~l~g~ip~l~~~l~~~ 670 (876)
T 4ecn_A 638 -----------------FN------------------------------AKSVYVMGSVDFSYNKIGSEGRNISCSMDDY 670 (876)
T ss_dssp -----------------CC------------------------------TTCSSCEEEEECCSSCTTTTSSSCSSCTTTC
T ss_pred -----------------hh------------------------------ccccCCCCEEECcCCcCCCccccchhhhccc
Confidence 00 0011235788888888887666432 1 1
Q ss_pred cCCcccEEEccCCcccccCccccCCCCCCCEEEccCCCCCCCCcccccC-C-------CCCCEEEcCCCcCCccCchhhh
Q 045553 541 HCKCMKFLSMAGNEFVGLIPQSFTNFDSLRNLNLSRNHLQGPLPSYINK-M-------EDLKFLSLSLNNFTGAIPWELT 612 (1082)
Q Consensus 541 ~~~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~-l-------~~L~~L~Ls~N~l~~~~p~~~~ 612 (1082)
...+|+.|+|++|+|+.+.+..+..+++|+.|+|++|+|+ .+|..+.. . ++|+.|+|++|+|+ .+|..+.
T Consensus 671 ~~~~L~~L~Ls~N~L~~lp~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~~~~~~~l~nl~~L~~L~Ls~N~L~-~lp~~l~ 748 (876)
T 4ecn_A 671 KGINASTVTLSYNEIQKFPTELFATGSPISTIILSNNLMT-SIPENSLKPKDGNYKNTYLLTTIDLRFNKLT-SLSDDFR 748 (876)
T ss_dssp CCCCEEEEECCSSCCCSCCHHHHHTTCCCSEEECCSCCCS-CCCTTSSSCTTSCCTTGGGCCEEECCSSCCC-CCCGGGS
T ss_pred cCCCcCEEEccCCcCCccCHHHHccCCCCCEEECCCCcCC-ccChHHhccccccccccCCccEEECCCCCCc-cchHHhh
Confidence 2347999999999999766666778999999999999999 55544433 2 39999999999999 7888887
Q ss_pred --cCcccchhhccCcccCCCCCccccCCcccceecccC------cccCCCCCCCCCCCCcccEEeccCCccccCCCCC--
Q 045553 613 --QLASLEVLELSANSLSGEIPSEFSKLEHLNVLRLDH------NNLTGRIPPGFGTRSSLSIFDVSFNNLSGSAPRN-- 682 (1082)
Q Consensus 613 --~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~------N~l~~~~p~~~~~l~~L~~l~ls~N~l~~~~p~~-- 682 (1082)
.+++|+.|+|++|+|++ +|..+..+++|+.|+|++ |++.+.+|..|..+++|+.|+|++|++ +.+|..
T Consensus 749 ~~~l~~L~~L~Ls~N~L~~-lp~~l~~L~~L~~L~Ls~N~~ls~N~l~~~ip~~l~~L~~L~~L~Ls~N~L-~~Ip~~l~ 826 (876)
T 4ecn_A 749 ATTLPYLSNMDVSYNCFSS-FPTQPLNSSQLKAFGIRHQRDAEGNRILRQWPTGITTCPSLIQLQIGSNDI-RKVDEKLT 826 (876)
T ss_dssp TTTCTTCCEEECCSSCCSS-CCCGGGGCTTCCEEECCCCBCTTCCBCCCCCCTTGGGCSSCCEEECCSSCC-CBCCSCCC
T ss_pred hccCCCcCEEEeCCCCCCc-cchhhhcCCCCCEEECCCCCCcccccccccChHHHhcCCCCCEEECCCCCC-CccCHhhc
Confidence 99999999999999997 798999999999999976 889999999999999999999999999 788875
Q ss_pred cccccccCCCCCCC
Q 045553 683 SLIKCENVQGNPNL 696 (1082)
Q Consensus 683 ~~~~~~~~~~Np~~ 696 (1082)
..+...++.+||+.
T Consensus 827 ~~L~~LdLs~N~l~ 840 (876)
T 4ecn_A 827 PQLYILDIADNPNI 840 (876)
T ss_dssp SSSCEEECCSCTTC
T ss_pred CCCCEEECCCCCCC
Confidence 33456678899875
No 37
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*
Probab=100.00 E-value=9.3e-43 Score=393.87 Aligned_cols=291 Identities=35% Similarity=0.651 Sum_probs=257.0
Q ss_pred cccccHHHHHHHhcCccccceecccCceEEEEEEEcCCeEEEEEEeecCcc-ccHHHHHHHHHHHhccCCCceeeEeeee
Q 045553 788 GVQLTYENVVRATAGFNVQNCIGSGGFGATYKAEIIPGVVVAVKRLSVGRF-QGVQQFAAEIRTLGRVQHPNLVTLIGYH 866 (1082)
Q Consensus 788 ~~~~~~~~~~~~~~~~~~~~~lg~G~~g~Vy~a~~~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~ 866 (1082)
...++++++....++|++.+.||+|+||.||+|+..+++.||||++..... .....+.+|++++++++||||+++++++
T Consensus 17 ~~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~ 96 (326)
T 3uim_A 17 LKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFC 96 (326)
T ss_dssp CEECCTHHHHTTTTSSCSTTEEECCSSSEEEEECCSSSCCEEEEECCC-----CCCHHHHHHHGGGTCCCTTBCCCCEEE
T ss_pred cceecHHHHHHHhhccccceeEecCCCcEEEEEEecCCCEEEEEEeccccCchHHHHHHHHHHHHHhccCCCccceEEEE
Confidence 356889999999999999999999999999999887899999999875432 2233689999999999999999999999
Q ss_pred ccCCeEEEEEeecCCCCHHHHHhhCC--CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEe
Q 045553 867 VSEAEMFLIYNYLPGGNLEKFIQDRP--RRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLS 944 (1082)
Q Consensus 867 ~~~~~~~lV~E~~~~gsL~~~l~~~~--~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~ 944 (1082)
......++||||+++|+|.++++... ...+++..+..++.|++.||+|||+.+.++|+||||||+||+++.++.+||+
T Consensus 97 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~~~~~~~kl~ 176 (326)
T 3uim_A 97 MTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVG 176 (326)
T ss_dssp CCSSCCEEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEECTTCCEEEC
T ss_pred ecCCceEEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEECCCCCEEec
Confidence 99999999999999999999998754 3359999999999999999999999877899999999999999999999999
Q ss_pred ecccceecCCCCCccccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHH
Q 045553 945 DFGLARLLGTSETHATTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLL 1024 (1082)
Q Consensus 945 DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 1024 (1082)
|||+++..............||+.|+|||++.+..++.++||||+|+++|||++|+.||+..............|+....
T Consensus 177 Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~ 256 (326)
T 3uim_A 177 DFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLL 256 (326)
T ss_dssp CCSSCEECCSSSSCEECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBCHHHHTTTSCSBHHHHHTTTT
T ss_pred cCccccccCcccccccccccCCcCccCHHHhccCCCCccccchhHHHHHHHHHhCCCcccccccccccchhHHHHHHHHh
Confidence 99999987655555555667999999999999999999999999999999999999999754444445667888888877
Q ss_pred hcCCCccccccccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhhC
Q 045553 1025 LQGRPCEFFTAGLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQLKQIQ 1078 (1082)
Q Consensus 1025 ~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L~~i~ 1078 (1082)
.........+.......+......+.+++.+|++.+|++|||+.||+++|++..
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~~~ 310 (326)
T 3uim_A 257 KEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGDG 310 (326)
T ss_dssp SSCCSTTSSCTTCTTSCCHHHHHHHHHHHHHHTCSCGGGSCCHHHHHHHHHTSS
T ss_pred hchhhhhhcChhhccccCHHHHHHHHHHHHHHhCcCCccCCCHHHHHHHhcCcc
Confidence 777788888888887888899999999999999999999999999999998643
No 38
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*
Probab=100.00 E-value=5.3e-42 Score=386.66 Aligned_cols=283 Identities=35% Similarity=0.579 Sum_probs=247.6
Q ss_pred ccHHHHHHHhcCccccceecccCceEEEEEEEcCCeEEEEEEeecCccccHHHHHHHHHHHhccCCCceeeEeeeeccCC
Q 045553 791 LTYENVVRATAGFNVQNCIGSGGFGATYKAEIIPGVVVAVKRLSVGRFQGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEA 870 (1082)
Q Consensus 791 ~~~~~~~~~~~~~~~~~~lg~G~~g~Vy~a~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~ 870 (1082)
+.+.++..++++|++.+.||+|+||.||+|...+++.||||++........+.+.+|++++++++||||+++++++.+.+
T Consensus 29 ~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~ 108 (321)
T 2qkw_B 29 VPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERN 108 (321)
T ss_dssp -CCSCCCCCCCCCSCCCCSCBCSSSEEEEEECTTCCEEEEEECCSCCSSHHHHHHHHHHGGGSCCCTTBCCEEEECCCTT
T ss_pred ecHHHHHHHHhccCccceeecCCCeeEEEEEECCCCEEEEEEecccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCC
Confidence 33444556788999999999999999999998889999999988776667788999999999999999999999999999
Q ss_pred eEEEEEeecCCCCHHHHHhhCC--CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeeccc
Q 045553 871 EMFLIYNYLPGGNLEKFIQDRP--RRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGL 948 (1082)
Q Consensus 871 ~~~lV~E~~~~gsL~~~l~~~~--~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGl 948 (1082)
..++||||+++|+|.+++.... ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 109 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~ 185 (321)
T 2qkw_B 109 EMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTR---AIIHRDVKSINILLDENFVPKITDFGI 185 (321)
T ss_dssp CCEEEEECCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCSTTEEECTTCCEEECCCTT
T ss_pred eEEEEEEcCCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhcCC---CeecCCCCHHHEEECCCCCEEEeeccc
Confidence 9999999999999999997653 23589999999999999999999999 999999999999999999999999999
Q ss_pred ceecCCCCC-ccccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcC
Q 045553 949 ARLLGTSET-HATTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQG 1027 (1082)
Q Consensus 949 a~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 1027 (1082)
++....... .......||+.|+|||++.+..++.++||||||+++|||++|+.||...... .......|.......+
T Consensus 186 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~~~~~~--~~~~~~~~~~~~~~~~ 263 (321)
T 2qkw_B 186 SKKGTELDQTHLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPR--EMVNLAEWAVESHNNG 263 (321)
T ss_dssp CEECSSSSCCCCBCCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSCSSSS--SCCCHHHHTHHHHTTT
T ss_pred ccccccccccccccccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCcccccCcH--HHHHHHHHhhhccccc
Confidence 987643322 2334456899999999999999999999999999999999999999765433 3456777877777777
Q ss_pred CCccccccccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhhC
Q 045553 1028 RPCEFFTAGLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQLKQIQ 1078 (1082)
Q Consensus 1028 ~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L~~i~ 1078 (1082)
.....+++......+.+.+..+.+++.+|++.||++||++.||+++|+.+.
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~l 314 (321)
T 2qkw_B 264 QLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYAL 314 (321)
T ss_dssp CCCSSSSSSCTTCSCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred cHHHhcChhhccccCHHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHh
Confidence 778888888777778889999999999999999999999999999998764
No 39
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=100.00 E-value=1.3e-42 Score=422.99 Aligned_cols=457 Identities=19% Similarity=0.177 Sum_probs=288.7
Q ss_pred CCEEEcccCCCcccCChhhcCCCCCCEEeCcCCCCCCCCCccccCCCCCCeEEccCcccccccCccccCCCCCcEEEccc
Q 045553 112 LRVLLLAFNGFSGELPLEIGQLSLLEILDLSFNSFHGPIPPTLQNCSSLRLINLSGNQFNGTIPAFFGQSPGFQVVSLSF 191 (1082)
Q Consensus 112 L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~ 191 (1082)
.+++++++|+++ .+|..+. ++|++|+|++|.+++..|..|.++++|++|+|++|++++..|..|.++++|++|+|++
T Consensus 33 ~~~l~ls~~~L~-~ip~~~~--~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 109 (562)
T 3a79_B 33 ESMVDYSNRNLT-HVPKDLP--PRTKALSLSQNSISELRMPDISFLSELRVLRLSHNRIRSLDFHVFLFNQDLEYLDVSH 109 (562)
T ss_dssp CCEEECTTSCCC-SCCTTSC--TTCCEEECCSSCCCCCCGGGTTTCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECTT
T ss_pred CcEEEcCCCCCc-cCCCCCC--CCcCEEECCCCCccccChhhhccCCCccEEECCCCCCCcCCHHHhCCCCCCCEEECCC
Confidence 367777777777 4665553 6777777777777766666777777777777777777776677777777777777777
Q ss_pred CcccccCCcccccccccccEEEcccCccCC-CCCccccCCCCccEEEccCCcCCCCcCccccCCCCC--CEEeCCCCcC-
Q 045553 192 NLLSGSVPEEFGDNCVSLEHILLAANSLTG-SIPPSLGNCTELRSLLLSSNMLQGDIPSSFGQLVNL--EVLDLSRNFL- 267 (1082)
Q Consensus 192 N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~-~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L--~~L~Ls~N~l- 267 (1082)
|+++ .+|.. .+++|++|+|++|++++ .+|..|+++++|++|++++|++++. .+..+++| ++|++++|++
T Consensus 110 N~l~-~lp~~---~l~~L~~L~Ls~N~l~~l~~p~~~~~l~~L~~L~L~~n~l~~~---~~~~l~~L~L~~L~L~~n~l~ 182 (562)
T 3a79_B 110 NRLQ-NISCC---PMASLRHLDLSFNDFDVLPVCKEFGNLTKLTFLGLSAAKFRQL---DLLPVAHLHLSCILLDLVSYH 182 (562)
T ss_dssp SCCC-EECSC---CCTTCSEEECCSSCCSBCCCCGGGGGCTTCCEEEEECSBCCTT---TTGGGTTSCEEEEEEEESSCC
T ss_pred CcCC-ccCcc---ccccCCEEECCCCCccccCchHhhcccCcccEEecCCCccccC---chhhhhhceeeEEEeeccccc
Confidence 7777 66665 46777777777777775 2356777777777777777777653 34444444 7777777777
Q ss_pred -cccCCccccCCCCCcE--EEeccccCCcccccCCCCCCcccccCCCcccccCCCCC-ccccCCCCCcEEEcCCCcc---
Q 045553 268 -SGIVPSELGMCKQLKV--LVLRNDYGPLYSREHGDLPIQPVVDGGEDYNFFDGGLP-DSITRLPNLRVFWAPNLNL--- 340 (1082)
Q Consensus 268 -~~~~p~~l~~l~~L~~--L~l~~n~~~~~~~~~~~l~~~~~~~~~~~~n~~~~~~p-~~l~~l~~L~~L~l~~n~l--- 340 (1082)
++..|..+..++. +. +++++| .+.+.++ ..+..+++|+.+++++|..
T Consensus 183 ~~~~~~~~l~~l~~-~~l~l~l~~n-------------------------~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~ 236 (562)
T 3a79_B 183 IKGGETESLQIPNT-TVLHLVFHPN-------------------------SLFSVQVNMSVNALGHLQLSNIKLNDENCQ 236 (562)
T ss_dssp CCSSSCCEEEECCE-EEEEEEECSS-------------------------SCCCCCCEEEESSEEEEEEEEEECCSTTHH
T ss_pred ccccCcccccccCc-ceEEEEecCc-------------------------cchhhhhhhcccccceEEEecccccccccc
Confidence 6666776666541 22 233332 2222222 3455677777777777641
Q ss_pred --cCCCCcccccccCCCeEEcCCccccCCC----CccccCCCCCCEEecCCCcCcccCCCCc------ccCcccEEEecC
Q 045553 341 --EGIFPQNWELCSKLEMLNLAHNFFTGQI----PASLGNCKSLYFLDLSSNNLTGLLPEEV------SVPCMAVFNVSQ 408 (1082)
Q Consensus 341 --~~~~~~~l~~l~~L~~L~Ls~N~i~~~~----p~~~~~l~~L~~L~Ls~N~l~~~~p~~~------~l~~L~~L~l~~ 408 (1082)
.+ ....+..+++|+.|+++++.+.+.. +..+ ..++|++|++++|.+++.+|..+ .+..|+.+++..
T Consensus 237 ~l~~-~~~~l~~l~~L~~L~L~~~~l~~~~~~~~~~~~-~~~~L~~L~l~~n~l~~~ip~~~~~~~~~~L~~L~~~~~~~ 314 (562)
T 3a79_B 237 RLMT-FLSELTRGPTLLNVTLQHIETTWKCSVKLFQFF-WPRPVEYLNIYNLTITERIDREEFTYSETALKSLMIEHVKN 314 (562)
T ss_dssp HHHH-HHHHHHSCSSCEEEEEEEEEECHHHHHHHHHHH-TTSSEEEEEEEEEEECSCCCCCCCCCCSCSCCEEEEEEEEE
T ss_pred hHHH-HHHHHhccCcceEEEecCCcCcHHHHHHHHHhh-hcccccEEEEeccEeeccccchhhhcccccchheehhhccc
Confidence 11 1234566677777777776665321 2211 23477777777777776666543 233444444444
Q ss_pred CcceecCCCCCCcccccccccccccceeeeeecccccccccccCcCCCCCCCCCceeEeeccCCcccCCCCCccccCCCc
Q 045553 409 NLLSGEIPRISHSECSKMSVNWSMSQVDLIGFYTAFFYENALTSCAPFSSPSNGLFILHDFSNNLFTGPVPPFLIDSDSL 488 (1082)
Q Consensus 409 N~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~n~~~g~~p~~~~~~~~l 488 (1082)
|.+ .+|.. ....+ +
T Consensus 315 ~~~--~~p~~---~~~~~-------------------------------------------------------------~ 328 (562)
T 3a79_B 315 QVF--LFSKE---ALYSV-------------------------------------------------------------F 328 (562)
T ss_dssp CCC--SSCHH---HHHHH-------------------------------------------------------------H
T ss_pred cee--ecChh---hhhhh-------------------------------------------------------------h
Confidence 433 11100 00000 0
Q ss_pred cccccceeeeccCCCccccCCcccccccCCceeEEEccCCcccccCCccccccCCcccEEEccCCcccccC--ccccCCC
Q 045553 489 SSRPYYGFWLSGNSLKGNLSTYPFDLCLSLDGLIFDIGNNKLIGEVPSDMGSHCKCMKFLSMAGNEFVGLI--PQSFTNF 566 (1082)
Q Consensus 489 ~~~~~~~~~~~~n~~~~~l~~~p~~~~~~~~l~~l~l~~n~l~~~ip~~~~~~~~~L~~L~L~~N~i~~~~--~~~~~~l 566 (1082)
+...+..+++++|.+... +. .....++++|++++|++.+.+|..+ ..+++|++|++++|+|+++. |..|..+
T Consensus 329 ~~~~L~~L~l~~n~~~~~----~~-~~~l~~L~~L~l~~n~l~~~~~~~~-~~l~~L~~L~L~~N~l~~~~~~~~~~~~l 402 (562)
T 3a79_B 329 AEMNIKMLSISDTPFIHM----VC-PPSPSSFTFLNFTQNVFTDSVFQGC-STLKRLQTLILQRNGLKNFFKVALMTKNM 402 (562)
T ss_dssp HTCCCSEEEEESSCCCCC----CC-CSSCCCCCEEECCSSCCCTTTTTTC-CSCSSCCEEECCSSCCCBTTHHHHTTTTC
T ss_pred ccCcceEEEccCCCcccc----cC-ccCCCCceEEECCCCccccchhhhh-cccCCCCEEECCCCCcCCcccchhhhcCC
Confidence 000111222222222110 00 0233456778888888876666554 45667888888888887643 4567888
Q ss_pred CCCCEEEccCCCCCCCCc-ccccCCCCCCEEEcCCCcCCccCchhhhcCcccchhhccCcccCCCCCccccCCcccceec
Q 045553 567 DSLRNLNLSRNHLQGPLP-SYINKMEDLKFLSLSLNNFTGAIPWELTQLASLEVLELSANSLSGEIPSEFSKLEHLNVLR 645 (1082)
Q Consensus 567 ~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 645 (1082)
++|++|+|++|++++.+| ..|..+++|++|+|++|++++.+|..+. ++|++|+|++|+|+ .+|..+..+++|++|+
T Consensus 403 ~~L~~L~l~~N~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~--~~L~~L~L~~N~l~-~ip~~~~~l~~L~~L~ 479 (562)
T 3a79_B 403 SSLETLDVSLNSLNSHAYDRTCAWAESILVLNLSSNMLTGSVFRCLP--PKVKVLDLHNNRIM-SIPKDVTHLQALQELN 479 (562)
T ss_dssp TTCCEEECTTSCCBSCCSSCCCCCCTTCCEEECCSSCCCGGGGSSCC--TTCSEEECCSSCCC-CCCTTTTSSCCCSEEE
T ss_pred CCCCEEECCCCcCCCccChhhhcCcccCCEEECCCCCCCcchhhhhc--CcCCEEECCCCcCc-ccChhhcCCCCCCEEE
Confidence 888888888888886344 4577788888888888888766665543 67888888888887 5666666888888888
Q ss_pred ccCcccCCCCCCC-CCCCCcccEEeccCCccccCCCCC
Q 045553 646 LDHNNLTGRIPPG-FGTRSSLSIFDVSFNNLSGSAPRN 682 (1082)
Q Consensus 646 L~~N~l~~~~p~~-~~~l~~L~~l~ls~N~l~~~~p~~ 682 (1082)
|++|+|++ +|.. |..+++|+.|++++|+++|.+|..
T Consensus 480 L~~N~l~~-l~~~~~~~l~~L~~L~l~~N~~~c~c~~~ 516 (562)
T 3a79_B 480 VASNQLKS-VPDGVFDRLTSLQYIWLHDNPWDCTCPGI 516 (562)
T ss_dssp CCSSCCCC-CCTTSTTTCTTCCCEECCSCCBCCCHHHH
T ss_pred CCCCCCCC-CCHHHHhcCCCCCEEEecCCCcCCCcchH
Confidence 88888884 4444 778888888888888877766643
No 40
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=100.00 E-value=4e-42 Score=393.79 Aligned_cols=260 Identities=22% Similarity=0.371 Sum_probs=203.3
Q ss_pred hcCccccceecccCceEEEEEEE-cCCeEEEEEEeecCc--cccHHHHHHHHHHHhccCCCceeeEeeeecc------CC
Q 045553 800 TAGFNVQNCIGSGGFGATYKAEI-IPGVVVAVKRLSVGR--FQGVQQFAAEIRTLGRVQHPNLVTLIGYHVS------EA 870 (1082)
Q Consensus 800 ~~~~~~~~~lg~G~~g~Vy~a~~-~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~------~~ 870 (1082)
.++|++.+.||+|+||+||+|.. .+|+.||||++.... ....+.+.+|++++++++|||||++++++.. .+
T Consensus 53 ~~~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~ 132 (398)
T 4b99_A 53 GDEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFK 132 (398)
T ss_dssp CSSEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCC
T ss_pred CCCeEEEEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCC
Confidence 35799999999999999999965 469999999996543 2345678899999999999999999998753 36
Q ss_pred eEEEEEeecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccce
Q 045553 871 EMFLIYNYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLAR 950 (1082)
Q Consensus 871 ~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~ 950 (1082)
..|+||||++ |+|.+++.. ...+++..+..++.||+.||+|||+. +||||||||+|||++.++.+||+|||+|+
T Consensus 133 ~~~ivmE~~~-g~L~~~i~~--~~~l~~~~~~~~~~qil~al~ylH~~---~iiHRDlKP~NIl~~~~~~~Ki~DFGla~ 206 (398)
T 4b99_A 133 SVYVVLDLME-SDLHQIIHS--SQPLTLEHVRYFLYQLLRGLKYMHSA---QVIHRDLKPSNLLVNENCELKIGDFGMAR 206 (398)
T ss_dssp CEEEEEECCS-EEHHHHHTS--SSCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTCCEEECCCTTCB
T ss_pred EEEEEEeCCC-CCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHC---cCcCCCcCccccccCCCCCEEEeecceee
Confidence 7899999995 789999986 35799999999999999999999999 99999999999999999999999999998
Q ss_pred ecCCCC---CccccCcccCCCcccchhcccC-CCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHh-
Q 045553 951 LLGTSE---THATTDVAGTFGYVAPEYAMTC-RVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLL- 1025 (1082)
Q Consensus 951 ~~~~~~---~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~- 1025 (1082)
.+.... .......+||+.|+|||++.+. .++.++||||+||++|||++|+.||... +..+.+..+..
T Consensus 207 ~~~~~~~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~--------~~~~~l~~I~~~ 278 (398)
T 4b99_A 207 GLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGK--------NYVHQLQLIMMV 278 (398)
T ss_dssp CC-------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCS--------SHHHHHHHHHHH
T ss_pred ecccCccccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCC--------CHHHHHHHHHHh
Confidence 764322 2234567899999999998875 5689999999999999999999999742 11222222211
Q ss_pred cCCCccccccc------------cCC--CCC-----hHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 045553 1026 QGRPCEFFTAG------------LWD--CGP-----HDDLIEMLNLAIMCTGESLSSRPSMRQVAQQ 1073 (1082)
Q Consensus 1026 ~~~~~~~~d~~------------l~~--~~~-----~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~ 1073 (1082)
.+......... +.. ..+ ...+.++.+|+.+|++.||++|||+.|++++
T Consensus 279 ~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~H 345 (398)
T 4b99_A 279 LGTPSPAVIQAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALRH 345 (398)
T ss_dssp HCCCCGGGTC-----CHHHHHHSSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSTTTSCCHHHHTTS
T ss_pred cCCCChHHhhhhhhhhhhhhhhcCCCcCCCCHHHhCCCCCHHHHHHHHHHCcCChhHCcCHHHHhcC
Confidence 11111110000 000 000 1234678899999999999999999999864
No 41
>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*
Probab=100.00 E-value=8.5e-42 Score=387.11 Aligned_cols=203 Identities=27% Similarity=0.429 Sum_probs=174.3
Q ss_pred HHHHHHHhcCccccceecccCceEEEEEEEc----CCeEEEEEEeecCccccHHHHHHHHHHHhcc-CCCceeeEeeeec
Q 045553 793 YENVVRATAGFNVQNCIGSGGFGATYKAEII----PGVVVAVKRLSVGRFQGVQQFAAEIRTLGRV-QHPNLVTLIGYHV 867 (1082)
Q Consensus 793 ~~~~~~~~~~~~~~~~lg~G~~g~Vy~a~~~----~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~ 867 (1082)
++.+.+..++|++.++||+|+||+||+|+.+ +++.||||++.... ...++.+|+++++.+ +||||+++++++.
T Consensus 13 ~~~~p~l~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~--~~~~~~~E~~~l~~~~~h~nIv~l~~~~~ 90 (361)
T 4f9c_A 13 YEAVPQLSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTS--HPIRIAAELQCLTVAGGQDNVMGVKYCFR 90 (361)
T ss_dssp HHHSGGGGGTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTS--CHHHHHHHHHHHHHTCSBTTBCCCSEEEE
T ss_pred HHhcCCccCcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEcccc--CHHHHHHHHHHHHHhcCCCCCceEEEEEE
Confidence 3444456788999999999999999999643 46899999986543 346688999999988 6999999999999
Q ss_pred cCCeEEEEEeecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCC-CcEEEeec
Q 045553 868 SEAEMFLIYNYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNN-LNAYLSDF 946 (1082)
Q Consensus 868 ~~~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~-~~~kl~Df 946 (1082)
+.+..|+||||+++|+|.++++ .+++.++..++.|++.||+|||+. +|+||||||+|||++.+ +.+||+||
T Consensus 91 ~~~~~~lvmE~~~g~~L~~~~~-----~l~~~~~~~~~~qll~al~ylH~~---gIiHRDiKPeNiLl~~~~~~~kl~DF 162 (361)
T 4f9c_A 91 KNDHVVIAMPYLEHESFLDILN-----SLSFQEVREYMLNLFKALKRIHQF---GIVHRDVKPSNFLYNRRLKKYALVDF 162 (361)
T ss_dssp ETTEEEEEEECCCCCCHHHHHT-----TCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEETTTTEEEECCC
T ss_pred ECCEEEEEEeCCCcccHHHHHc-----CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCcCCHHHeEEeCCCCeEEECcC
Confidence 9999999999999999999985 389999999999999999999999 99999999999999877 79999999
Q ss_pred ccceecCCCCC---------------------------ccccCcccCCCcccchhcccC-CCCchhhHHHHHHHHHHHHh
Q 045553 947 GLARLLGTSET---------------------------HATTDVAGTFGYVAPEYAMTC-RVSDKADVYSFGVVLLELIS 998 (1082)
Q Consensus 947 Gla~~~~~~~~---------------------------~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~slGvll~ellt 998 (1082)
|+|+....... ......+||+.|+|||++.+. .|+.++||||+||++|||++
T Consensus 163 Gla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il~ell~ 242 (361)
T 4f9c_A 163 GLAQGTHDTKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLS 242 (361)
T ss_dssp TTCEECTTCSCGGGGGC--------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHHH
T ss_pred CCCcccCCccccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchhhhHHHHHHHHH
Confidence 99986643221 112345799999999999875 58999999999999999999
Q ss_pred CCCCCCC
Q 045553 999 DKKALDP 1005 (1082)
Q Consensus 999 g~~p~~~ 1005 (1082)
|+.||..
T Consensus 243 G~~Pf~~ 249 (361)
T 4f9c_A 243 GRYPFYK 249 (361)
T ss_dssp TCSSSSC
T ss_pred CCCCCCC
Confidence 9999963
No 42
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=100.00 E-value=6.9e-41 Score=397.13 Aligned_cols=140 Identities=26% Similarity=0.267 Sum_probs=130.5
Q ss_pred CcccEEEccCCcccccCccccCCCCCCCEEEccCCCCCCCCcccccCCCCCCEEEcCCCcCCccCchhhhcCcccchhhc
Q 045553 543 KCMKFLSMAGNEFVGLIPQSFTNFDSLRNLNLSRNHLQGPLPSYINKMEDLKFLSLSLNNFTGAIPWELTQLASLEVLEL 622 (1082)
Q Consensus 543 ~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 622 (1082)
++|+.|++++|++++..|..|..+++|++|+|++|++++..|..|..+++|++|+|++|++++..|..|.++++|++|+|
T Consensus 275 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 354 (455)
T 3v47_A 275 SGVKTCDLSKSKIFALLKSVFSHFTDLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQNFLGSIDSRMFENLDKLEVLDL 354 (455)
T ss_dssp SCCCEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGGTTCTTCCEEEC
T ss_pred cCceEEEecCccccccchhhcccCCCCCEEECCCCcccccChhHhcCcccCCEEECCCCccCCcChhHhcCcccCCEEEC
Confidence 45899999999999999999999999999999999999888999999999999999999999888999999999999999
Q ss_pred cCcccCCCCCccccCCcccceecccCcccCCCCCCCCCCCCcccEEeccCCccccCCCCC
Q 045553 623 SANSLSGEIPSEFSKLEHLNVLRLDHNNLTGRIPPGFGTRSSLSIFDVSFNNLSGSAPRN 682 (1082)
Q Consensus 623 s~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~l~ls~N~l~~~~p~~ 682 (1082)
++|+|++..|..|..+++|++|+|++|+|++..+..|..+++|+.|++++|+++|.+|..
T Consensus 355 s~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~ 414 (455)
T 3v47_A 355 SYNHIRALGDQSFLGLPNLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPRI 414 (455)
T ss_dssp CSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTTTT
T ss_pred CCCcccccChhhccccccccEEECCCCccccCCHhHhccCCcccEEEccCCCcccCCCcc
Confidence 999999888999999999999999999999877778899999999999999999887753
No 43
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=100.00 E-value=2.4e-41 Score=411.70 Aligned_cols=462 Identities=20% Similarity=0.209 Sum_probs=348.8
Q ss_pred CCCCEEeCcCCCCCCCCCccccCCCCCCeEEccCcccccccCccccCCCCCcEEEcccCcccccCCcccccccccccEEE
Q 045553 134 SLLEILDLSFNSFHGPIPPTLQNCSSLRLINLSGNQFNGTIPAFFGQSPGFQVVSLSFNLLSGSVPEEFGDNCVSLEHIL 213 (1082)
Q Consensus 134 ~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~ 213 (1082)
...+++|+++|.++ .+|..+. ++|++|+|++|++++..|..|.++++|++|+|++|++++..|..+. .+++|++|+
T Consensus 31 ~~~~~l~ls~~~L~-~ip~~~~--~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~-~l~~L~~L~ 106 (562)
T 3a79_B 31 ELESMVDYSNRNLT-HVPKDLP--PRTKALSLSQNSISELRMPDISFLSELRVLRLSHNRIRSLDFHVFL-FNQDLEYLD 106 (562)
T ss_dssp --CCEEECTTSCCC-SCCTTSC--TTCCEEECCSSCCCCCCGGGTTTCTTCCEEECCSCCCCEECTTTTT-TCTTCCEEE
T ss_pred CCCcEEEcCCCCCc-cCCCCCC--CCcCEEECCCCCccccChhhhccCCCccEEECCCCCCCcCCHHHhC-CCCCCCEEE
Confidence 34589999999999 5887664 8999999999999988889999999999999999999965566654 689999999
Q ss_pred cccCccCCCCCccccCCCCccEEEccCCcCCC-CcCccccCCCCCCEEeCCCCcCcccCCccccCCCCC--cEEEecccc
Q 045553 214 LAANSLTGSIPPSLGNCTELRSLLLSSNMLQG-DIPSSFGQLVNLEVLDLSRNFLSGIVPSELGMCKQL--KVLVLRNDY 290 (1082)
Q Consensus 214 L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~-~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L--~~L~l~~n~ 290 (1082)
|++|+++ .+|.. .+++|++|+|++|++++ .+|..|+.+++|++|++++|++++. .+..+++| ++|++++|.
T Consensus 107 Ls~N~l~-~lp~~--~l~~L~~L~Ls~N~l~~l~~p~~~~~l~~L~~L~L~~n~l~~~---~~~~l~~L~L~~L~L~~n~ 180 (562)
T 3a79_B 107 VSHNRLQ-NISCC--PMASLRHLDLSFNDFDVLPVCKEFGNLTKLTFLGLSAAKFRQL---DLLPVAHLHLSCILLDLVS 180 (562)
T ss_dssp CTTSCCC-EECSC--CCTTCSEEECCSSCCSBCCCCGGGGGCTTCCEEEEECSBCCTT---TTGGGTTSCEEEEEEEESS
T ss_pred CCCCcCC-ccCcc--ccccCCEEECCCCCccccCchHhhcccCcccEEecCCCccccC---chhhhhhceeeEEEeeccc
Confidence 9999999 66666 79999999999999986 3468999999999999999999863 45555555 999998753
Q ss_pred CCcccccCCCCCCcccccCCCcccccCCCCCccccCCC--CCcEEEcCCCcccCCCCc-ccccccCCCeEEcCCcc----
Q 045553 291 GPLYSREHGDLPIQPVVDGGEDYNFFDGGLPDSITRLP--NLRVFWAPNLNLEGIFPQ-NWELCSKLEMLNLAHNF---- 363 (1082)
Q Consensus 291 ~~~~~~~~~~l~~~~~~~~~~~~n~~~~~~p~~l~~l~--~L~~L~l~~n~l~~~~~~-~l~~l~~L~~L~Ls~N~---- 363 (1082)
+. ..+..|..+..+. .| .++++.|.+.+..+. .+..+++|+.|++++|+
T Consensus 181 l~-----------------------~~~~~~~~l~~l~~~~l-~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~ 236 (562)
T 3a79_B 181 YH-----------------------IKGGETESLQIPNTTVL-HLVFHPNSLFSVQVNMSVNALGHLQLSNIKLNDENCQ 236 (562)
T ss_dssp CC-----------------------CCSSSCCEEEECCEEEE-EEEECSSSCCCCCCEEEESSEEEEEEEEEECCSTTHH
T ss_pred cc-----------------------ccccCcccccccCcceE-EEEecCccchhhhhhhcccccceEEEecccccccccc
Confidence 20 0455677776655 33 457788887775544 46678889999999885
Q ss_pred -ccCCCCccccCCCCCCEEecCCCcCcccC----CCCcccCcccEEEecCCcceecCCCCCCcccccccccccccceeee
Q 045553 364 -FTGQIPASLGNCKSLYFLDLSSNNLTGLL----PEEVSVPCMAVFNVSQNLLSGEIPRISHSECSKMSVNWSMSQVDLI 438 (1082)
Q Consensus 364 -i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~----p~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 438 (1082)
+. ..+..+..+++|+.|+|++|.+.+.. +.....++|+.|++++|.++|.+|.......
T Consensus 237 ~l~-~~~~~l~~l~~L~~L~L~~~~l~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~ip~~~~~~~--------------- 300 (562)
T 3a79_B 237 RLM-TFLSELTRGPTLLNVTLQHIETTWKCSVKLFQFFWPRPVEYLNIYNLTITERIDREEFTYS--------------- 300 (562)
T ss_dssp HHH-HHHHHHHSCSSCEEEEEEEEEECHHHHHHHHHHHTTSSEEEEEEEEEEECSCCCCCCCCCC---------------
T ss_pred hHH-HHHHHHhccCcceEEEecCCcCcHHHHHHHHHhhhcccccEEEEeccEeeccccchhhhcc---------------
Confidence 22 22345677888888888888776531 2222345788888888888777664210000
Q ss_pred eecccccccccccCcCCCCCCCCCceeEeeccCCcccCCCCCccccCCCccccccceeeeccCCCccccCCcccccccCC
Q 045553 439 GFYTAFFYENALTSCAPFSSPSNGLFILHDFSNNLFTGPVPPFLIDSDSLSSRPYYGFWLSGNSLKGNLSTYPFDLCLSL 518 (1082)
Q Consensus 439 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~n~~~g~~p~~~~~~~~l~~~~~~~~~~~~n~~~~~l~~~p~~~~~~~ 518 (1082)
...-.-+.+.+++.|.+ .+|. .....+....
T Consensus 301 -------------------~~~L~~L~~~~~~~~~~--~~p~----------------------------~~~~~~~~~~ 331 (562)
T 3a79_B 301 -------------------ETALKSLMIEHVKNQVF--LFSK----------------------------EALYSVFAEM 331 (562)
T ss_dssp -------------------SCSCCEEEEEEEEECCC--SSCH----------------------------HHHHHHHHTC
T ss_pred -------------------cccchheehhhccccee--ecCh----------------------------hhhhhhhccC
Confidence 00000011222222222 1111 0011122335
Q ss_pred ceeEEEccCCcccccCCccccccCCcccEEEccCCcccccCccccCCCCCCCEEEccCCCCCCCC--cccccCCCCCCEE
Q 045553 519 DGLIFDIGNNKLIGEVPSDMGSHCKCMKFLSMAGNEFVGLIPQSFTNFDSLRNLNLSRNHLQGPL--PSYINKMEDLKFL 596 (1082)
Q Consensus 519 ~l~~l~l~~n~l~~~ip~~~~~~~~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~--p~~~~~l~~L~~L 596 (1082)
++++|++++|.+.. + .....+++|++|++++|++++..|..|..+++|++|+|++|++++.. |..|..+++|++|
T Consensus 332 ~L~~L~l~~n~~~~-~--~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L 408 (562)
T 3a79_B 332 NIKMLSISDTPFIH-M--VCPPSPSSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLETL 408 (562)
T ss_dssp CCSEEEEESSCCCC-C--CCCSSCCCCCEEECCSSCCCTTTTTTCCSCSSCCEEECCSSCCCBTTHHHHTTTTCTTCCEE
T ss_pred cceEEEccCCCccc-c--cCccCCCCceEEECCCCccccchhhhhcccCCCCEEECCCCCcCCcccchhhhcCCCCCCEE
Confidence 68899999998752 2 22356788999999999999999999999999999999999999643 4679999999999
Q ss_pred EcCCCcCCccCch-hhhcCcccchhhccCcccCCCCCccccCCcccceecccCcccCCCCCCCCCCCCcccEEeccCCcc
Q 045553 597 SLSLNNFTGAIPW-ELTQLASLEVLELSANSLSGEIPSEFSKLEHLNVLRLDHNNLTGRIPPGFGTRSSLSIFDVSFNNL 675 (1082)
Q Consensus 597 ~Ls~N~l~~~~p~-~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~l~ls~N~l 675 (1082)
+|++|++++.+|. .|..+++|++|+|++|+|++.+|..+. ++|++|+|++|+|+ .+|..+..+++|+.|++++|++
T Consensus 409 ~l~~N~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~--~~L~~L~L~~N~l~-~ip~~~~~l~~L~~L~L~~N~l 485 (562)
T 3a79_B 409 DVSLNSLNSHAYDRTCAWAESILVLNLSSNMLTGSVFRCLP--PKVKVLDLHNNRIM-SIPKDVTHLQALQELNVASNQL 485 (562)
T ss_dssp ECTTSCCBSCCSSCCCCCCTTCCEEECCSSCCCGGGGSSCC--TTCSEEECCSSCCC-CCCTTTTSSCCCSEEECCSSCC
T ss_pred ECCCCcCCCccChhhhcCcccCCEEECCCCCCCcchhhhhc--CcCCEEECCCCcCc-ccChhhcCCCCCCEEECCCCCC
Confidence 9999999984554 588999999999999999987776554 79999999999999 6787777999999999999999
Q ss_pred ccCCCCC-----cccccccCCCCCCCCCCCC
Q 045553 676 SGSAPRN-----SLIKCENVQGNPNLQLCHT 701 (1082)
Q Consensus 676 ~~~~p~~-----~~~~~~~~~~Np~~c~c~~ 701 (1082)
+ .+|.. ..+....+.+|||.|+|..
T Consensus 486 ~-~l~~~~~~~l~~L~~L~l~~N~~~c~c~~ 515 (562)
T 3a79_B 486 K-SVPDGVFDRLTSLQYIWLHDNPWDCTCPG 515 (562)
T ss_dssp C-CCCTTSTTTCTTCCCEECCSCCBCCCHHH
T ss_pred C-CCCHHHHhcCCCCCEEEecCCCcCCCcch
Confidence 9 56654 2345678999999999973
No 44
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=100.00 E-value=3.5e-40 Score=408.41 Aligned_cols=493 Identities=20% Similarity=0.181 Sum_probs=382.1
Q ss_pred CCCCEEEcccCCCcccCChhhcCCCCCCEEeCcCCCCCCCCCccccCCCCCCeEEccCcccccccCccccCCCCCcEEEc
Q 045553 110 TQLRVLLLAFNGFSGELPLEIGQLSLLEILDLSFNSFHGPIPPTLQNCSSLRLINLSGNQFNGTIPAFFGQSPGFQVVSL 189 (1082)
Q Consensus 110 ~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 189 (1082)
+++++|||++|+|++..|.+|.++++|++|||++|+|++..|.+|.++++|++|+|++|+|++..+..|.++++|++|+|
T Consensus 52 ~~~~~LdLs~N~i~~l~~~~f~~l~~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~l~~l~~~~f~~L~~L~~L~L 131 (635)
T 4g8a_A 52 FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVA 131 (635)
T ss_dssp TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECGGGGTTCTTCCEEEC
T ss_pred cCCCEEEeeCCCCCCCCHHHHhCCCCCCEEECCCCcCCCcChhHhcCCCCCCEEEccCCcCCCCCHHHhcCCCCCCEEEC
Confidence 47899999999999777789999999999999999999777888999999999999999999877789999999999999
Q ss_pred ccCcccccCCcccccccccccEEEcccCccCC-CCCccccCCCCccEEEccCCcCCCCcCccccCCCCC----CEEeCCC
Q 045553 190 SFNLLSGSVPEEFGDNCVSLEHILLAANSLTG-SIPPSLGNCTELRSLLLSSNMLQGDIPSSFGQLVNL----EVLDLSR 264 (1082)
Q Consensus 190 ~~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~-~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L----~~L~Ls~ 264 (1082)
++|+++ .+|...+..+++|++|+|++|++++ ..|..++.+++|++|+|++|++++..+..|..+.++ ..++++.
T Consensus 132 s~N~l~-~l~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~L~~l~~~~~~~~ls~ 210 (635)
T 4g8a_A 132 VETNLA-SLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSL 210 (635)
T ss_dssp TTSCCC-CSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCCEEECTT
T ss_pred CCCcCC-CCChhhhhcCcccCeeccccCccccCCCchhhccchhhhhhcccCccccccccccccchhhhhhhhhhhhccc
Confidence 999999 5666555579999999999999986 357888999999999999999998888888766554 4789999
Q ss_pred CcCcccCCccccCCCCCcEEEeccccCCc--ccccCCCCCCccccc----CCCcccccCCCCCccccCCCCCcEEEcCCC
Q 045553 265 NFLSGIVPSELGMCKQLKVLVLRNDYGPL--YSREHGDLPIQPVVD----GGEDYNFFDGGLPDSITRLPNLRVFWAPNL 338 (1082)
Q Consensus 265 N~l~~~~p~~l~~l~~L~~L~l~~n~~~~--~~~~~~~l~~~~~~~----~~~~~n~~~~~~p~~l~~l~~L~~L~l~~n 338 (1082)
|.++...+..+ ....++.+++.+|.... .......+....... .......+....+..+..+..+....+..+
T Consensus 211 n~l~~i~~~~~-~~~~~~~l~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~l~~~~l~~~ 289 (635)
T 4g8a_A 211 NPMNFIQPGAF-KEIRLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLA 289 (635)
T ss_dssp CCCCEECTTTT-TTCEEEEEEEESCCSSHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCTTTTGGGGGSEEEEEEEE
T ss_pred CcccccCcccc-cchhhhhhhhhcccccccccchhhcCCcccccccccccccccccccccccccccccccchhhhhhhhh
Confidence 99986555544 44567788888875431 111111111111100 011223344444556666677777666554
Q ss_pred cccC---CCCcccccccCCCeEEcCCccccCCCCccccCCCCCCEEecCCCcCcccCCCCcccCcccEEEecCCcceecC
Q 045553 339 NLEG---IFPQNWELCSKLEMLNLAHNFFTGQIPASLGNCKSLYFLDLSSNNLTGLLPEEVSVPCMAVFNVSQNLLSGEI 415 (1082)
Q Consensus 339 ~l~~---~~~~~l~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~l~~L~~L~l~~N~l~~~~ 415 (1082)
.... .....+..+.+++.+++.+|.+... ..+.....|+.|++++|.+.+..+. .+..|+.+++++|.+.+..
T Consensus 290 ~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~--~~~~~~~~L~~L~l~~~~~~~~~~~--~l~~L~~l~l~~n~~~~~~ 365 (635)
T 4g8a_A 290 YLDYYLDGIIDLFNCLTNVSSFSLVSVTIERV--KDFSYNFGWQHLELVNCKFGQFPTL--KLKSLKRLTFTSNKGGNAF 365 (635)
T ss_dssp CCCSCEEECTTTTGGGTTCSEEEEESCEEEEC--GGGGSCCCCSEEEEESCEESSCCCC--BCTTCCEEEEESCCSCCBC
T ss_pred hhcccccchhhhhhhhcccccccccccccccc--cccccchhhhhhhcccccccCcCcc--cchhhhhcccccccCCCCc
Confidence 3322 2344567788999999999998843 3466778999999999999876553 4578889999998876432
Q ss_pred CCCCCcccccccccccccceeeeeecccccccccccCcCCCCCCCCCceeEeeccCCcccCCCCCccccCCCccccccce
Q 045553 416 PRISHSECSKMSVNWSMSQVDLIGFYTAFFYENALTSCAPFSSPSNGLFILHDFSNNLFTGPVPPFLIDSDSLSSRPYYG 495 (1082)
Q Consensus 416 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~n~~~g~~p~~~~~~~~l~~~~~~~ 495 (1082)
.... +. -+...++++|.+...
T Consensus 366 ~~~~---l~--------------------------------------~L~~L~ls~n~l~~~------------------ 386 (635)
T 4g8a_A 366 SEVD---LP--------------------------------------SLEFLDLSRNGLSFK------------------ 386 (635)
T ss_dssp CCCB---CT--------------------------------------TCCEEECCSSCCBEE------------------
T ss_pred cccc---cc--------------------------------------ccccchhhccccccc------------------
Confidence 2110 00 011234444444311
Q ss_pred eeeccCCCccccCCcccccccCCceeEEEccCCcccccCCccccccCCcccEEEccCCcccccCc-cccCCCCCCCEEEc
Q 045553 496 FWLSGNSLKGNLSTYPFDLCLSLDGLIFDIGNNKLIGEVPSDMGSHCKCMKFLSMAGNEFVGLIP-QSFTNFDSLRNLNL 574 (1082)
Q Consensus 496 ~~~~~n~~~~~l~~~p~~~~~~~~l~~l~l~~n~l~~~ip~~~~~~~~~L~~L~L~~N~i~~~~~-~~~~~l~~L~~L~L 574 (1082)
...+.......+++++++..|.+.+ ++.. +..+++|+.++++.|++....+ ..|..+++++.+++
T Consensus 387 ------------~~~~~~~~~~~~L~~L~~~~~~~~~-~~~~-~~~l~~L~~l~l~~~~~~~~~~~~~~~~l~~l~~l~l 452 (635)
T 4g8a_A 387 ------------GCCSQSDFGTISLKYLDLSFNGVIT-MSSN-FLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDI 452 (635)
T ss_dssp ------------EECCHHHHSCSCCCEEECCSCSEEE-ECSC-CTTCTTCCEEECTTSEEESTTSSCTTTTCTTCCEEEC
T ss_pred ------------cccccchhhhhhhhhhhcccccccc-cccc-ccccccccchhhhhccccccccccccccccccccccc
Confidence 1123344456678899999999874 4443 4467889999999998876554 57899999999999
Q ss_pred cCCCCCCCCcccccCCCCCCEEEcCCCcC-CccCchhhhcCcccchhhccCcccCCCCCccccCCcccceecccCcccCC
Q 045553 575 SRNHLQGPLPSYINKMEDLKFLSLSLNNF-TGAIPWELTQLASLEVLELSANSLSGEIPSEFSKLEHLNVLRLDHNNLTG 653 (1082)
Q Consensus 575 ~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l-~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~ 653 (1082)
++|.+++..+..+..+++|+.|+|++|++ .+..|..|..+++|++|+|++|+|++.+|..|.++++|++|+|++|+|++
T Consensus 453 s~n~l~~~~~~~~~~~~~L~~L~Ls~N~~~~~~~~~~~~~l~~L~~L~Ls~N~L~~l~~~~f~~l~~L~~L~Ls~N~l~~ 532 (635)
T 4g8a_A 453 SHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFS 532 (635)
T ss_dssp TTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCB
T ss_pred cccccccccccccccchhhhhhhhhhcccccccCchhhhhccccCEEECCCCccCCcChHHHcCCCCCCEEECCCCcCCC
Confidence 99999999999999999999999999985 44678899999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCcccEEeccCCccccCCCC
Q 045553 654 RIPPGFGTRSSLSIFDVSFNNLSGSAPR 681 (1082)
Q Consensus 654 ~~p~~~~~l~~L~~l~ls~N~l~~~~p~ 681 (1082)
..|..|..+++|++|+|++|+|++..|.
T Consensus 533 l~~~~~~~l~~L~~L~Ls~N~l~~~~~~ 560 (635)
T 4g8a_A 533 LDTFPYKCLNSLQVLDYSLNHIMTSKKQ 560 (635)
T ss_dssp CCCGGGTTCTTCCEEECTTSCCCBCCSS
T ss_pred CChhHHhCCCCCCEEECCCCcCCCCCHH
Confidence 9899999999999999999999987774
No 45
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=100.00 E-value=7.5e-41 Score=397.66 Aligned_cols=248 Identities=24% Similarity=0.330 Sum_probs=203.0
Q ss_pred cCccccceecccCceEEEEEEEc-CCeEEEEEEeecCc---cccHHHH---HHHHHHHhccCCCceeeEeeeeccCCeEE
Q 045553 801 AGFNVQNCIGSGGFGATYKAEII-PGVVVAVKRLSVGR---FQGVQQF---AAEIRTLGRVQHPNLVTLIGYHVSEAEMF 873 (1082)
Q Consensus 801 ~~~~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~---~~~~~~~---~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 873 (1082)
++|++.++||+|+||+||+|+.. +|+.||||++.... ......+ ..++.+++.++|||||++++++.+.+..|
T Consensus 189 ddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~~ly 268 (689)
T 3v5w_A 189 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLS 268 (689)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEEE
T ss_pred HHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEECCEEE
Confidence 56999999999999999999654 69999999996432 1222223 34467778889999999999999999999
Q ss_pred EEEeecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecC
Q 045553 874 LIYNYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLG 953 (1082)
Q Consensus 874 lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~ 953 (1082)
+||||++||+|.+++... ..+++..+..++.||+.||+|||+. +||||||||+|||++.+|.+||+|||+|+.+.
T Consensus 269 lVmEy~~GGdL~~~l~~~--~~l~E~~a~~y~~qIl~aL~yLH~~---gIiHRDLKPeNILld~~G~vKL~DFGlA~~~~ 343 (689)
T 3v5w_A 269 FILDLMNGGDLHYHLSQH--GVFSEADMRFYAAEIILGLEHMHNR---FVVYRDLKPANILLDEHGHVRISDLGLACDFS 343 (689)
T ss_dssp EEECCCCSCBHHHHHHHH--CCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECTTSCEEECCCTTCEECS
T ss_pred EEEecCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCchHHeEEeCCCCEEecccceeeecC
Confidence 999999999999999874 4699999999999999999999999 99999999999999999999999999999875
Q ss_pred CCCCccccCcccCCCcccchhccc-CCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCCCccc
Q 045553 954 TSETHATTDVAGTFGYVAPEYAMT-CRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQGRPCEF 1032 (1082)
Q Consensus 954 ~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1032 (1082)
... ....+||+.|+|||++.. ..|+.++||||+||++|||++|+.||..... .+............ .
T Consensus 344 ~~~---~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~-----~~~~~i~~~i~~~~-~--- 411 (689)
T 3v5w_A 344 KKK---PHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKT-----KDKHEIDRMTLTMA-V--- 411 (689)
T ss_dssp SCC---CCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGC-----CCHHHHHHHHHHCC-C---
T ss_pred CCC---CCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCh-----HHHHHHHHhhcCCC-C---
Confidence 433 345689999999999974 5799999999999999999999999974321 12222222222211 1
Q ss_pred cccccCCCCChHHHHHHHHHHHHcccCCCCCCCC-----HHHHHH
Q 045553 1033 FTAGLWDCGPHDDLIEMLNLAIMCTGESLSSRPS-----MRQVAQ 1072 (1082)
Q Consensus 1033 ~d~~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt-----~~ev~~ 1072 (1082)
..|...+.++.+|+.+|++.||++|++ +.||.+
T Consensus 412 -------~~p~~~S~~a~dLI~~lL~~dP~~Rl~~~~~ga~ei~~ 449 (689)
T 3v5w_A 412 -------ELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKE 449 (689)
T ss_dssp -------CCCTTSCHHHHHHHHHHTCSCGGGCTTCSSSTHHHHTT
T ss_pred -------CCCccCCHHHHHHHHHHccCCHhHCCCCCCCCHHHHhc
Confidence 123445678999999999999999998 677764
No 46
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=100.00 E-value=5.8e-41 Score=403.53 Aligned_cols=253 Identities=21% Similarity=0.288 Sum_probs=213.2
Q ss_pred hcCccccceecccCceEEEEEEE-cCCeEEEEEEeecCccccHHHHHHHHHHHhccCCCceeeEeeeeccCCeEEEEEee
Q 045553 800 TAGFNVQNCIGSGGFGATYKAEI-IPGVVVAVKRLSVGRFQGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFLIYNY 878 (1082)
Q Consensus 800 ~~~~~~~~~lg~G~~g~Vy~a~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~ 878 (1082)
.++|++.+.||+|+||+||+|.. .+|+.||+|++........+.+.+|+++++.++|||||++++++.+....|+||||
T Consensus 156 l~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iv~E~ 235 (573)
T 3uto_A 156 LDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEF 235 (573)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred ccccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccchhhHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEee
Confidence 35799999999999999999965 46999999999877666677899999999999999999999999999999999999
Q ss_pred cCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCC--CcEEEeecccceecCCCC
Q 045553 879 LPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNN--LNAYLSDFGLARLLGTSE 956 (1082)
Q Consensus 879 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~--~~~kl~DfGla~~~~~~~ 956 (1082)
++||+|.+++... ...+++..+..++.||+.||+|||++ +|+||||||+|||++.+ +.+||+|||+|+.+....
T Consensus 236 ~~gg~L~~~i~~~-~~~l~e~~~~~~~~qi~~al~ylH~~---~iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~~~~~ 311 (573)
T 3uto_A 236 MSGGELFEKVADE-HNKMSEDEAVEYMRQVCKGLCHMHEN---NYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQ 311 (573)
T ss_dssp CCCCBHHHHHTCT-TSCEEHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSCCCEEECCCSSCEECCTTS
T ss_pred cCCCcHHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCChhhccccCCCCCCEEEeeccceeEccCCC
Confidence 9999999999754 35699999999999999999999999 99999999999999854 899999999999875433
Q ss_pred CccccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCCCccccccc
Q 045553 957 THATTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQGRPCEFFTAG 1036 (1082)
Q Consensus 957 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 1036 (1082)
.....+||+.|+|||++.+..|+.++||||+||++|||++|+.||... +..+.+..+....... ...
T Consensus 312 --~~~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~--------~~~~~~~~i~~~~~~~---~~~ 378 (573)
T 3uto_A 312 --SVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGE--------NDDETLRNVKSCDWNM---DDS 378 (573)
T ss_dssp --EEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCS--------SHHHHHHHHHTTCCCC---CSG
T ss_pred --ceeeeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCc--------CHHHHHHHHHhCCCCC---Ccc
Confidence 234468999999999999999999999999999999999999999732 2233333333222110 111
Q ss_pred cCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 045553 1037 LWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQ 1073 (1082)
Q Consensus 1037 l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~ 1073 (1082)
.....+.++.+|+.+|++.||++||++.|++++
T Consensus 379 ----~~~~~s~~~~dli~~~L~~dp~~R~t~~e~l~H 411 (573)
T 3uto_A 379 ----AFSGISEDGKDFIRKLLLADPNTRMTIHQALEH 411 (573)
T ss_dssp ----GGTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred ----cccCCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 112345678999999999999999999999874
No 47
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=100.00 E-value=7.4e-40 Score=385.19 Aligned_cols=249 Identities=24% Similarity=0.351 Sum_probs=152.2
Q ss_pred CCCCCCEEEcccCCCcccCChhhcCCCCCCEEeCcCCCCCCCCCccccCCCCC-------------CeEEccCccccccc
Q 045553 108 DLTQLRVLLLAFNGFSGELPLEIGQLSLLEILDLSFNSFHGPIPPTLQNCSSL-------------RLINLSGNQFNGTI 174 (1082)
Q Consensus 108 ~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L-------------~~L~Ls~N~l~~~~ 174 (1082)
..++|++|++++|.+ +.+|++|+++++|++|++++|.+.+.+|..++++++| ++|++++|++++ +
T Consensus 9 ~~~~L~~L~l~~n~l-~~iP~~i~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~c~~~~l~~L~l~~~~l~~-l 86 (454)
T 1jl5_A 9 SNTFLQEPLRHSSNL-TEMPVEAENVKSKTEYYNAWSEWERNAPPGNGEQREMAVSRLRDCLDRQAHELELNNLGLSS-L 86 (454)
T ss_dssp --------------------------CCHHHHHHHHHHHHHTSCTTSCCCHHHHHHHHHHHHHHTCSEEECTTSCCSC-C
T ss_pred ccccchhhhcccCch-hhCChhHhcccchhhhhccCCcccccCCcccccchhcchhhhhhhhccCCCEEEecCCcccc-C
Confidence 457888888888888 5888888888888888888888888888888888765 777777777774 3
Q ss_pred CccccCCCCCcEEEcccCcccccCCcccccccccccEEEcccCccCCCCCccccCCCCccEEEccCCcCCCCcCccccCC
Q 045553 175 PAFFGQSPGFQVVSLSFNLLSGSVPEEFGDNCVSLEHILLAANSLTGSIPPSLGNCTELRSLLLSSNMLQGDIPSSFGQL 254 (1082)
Q Consensus 175 p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l 254 (1082)
|.. .++|++|++++|++++ +|.. +++|++|++++|++++ ++.. .++|++|++++|++++ +| .|+.+
T Consensus 87 p~~---~~~L~~L~l~~n~l~~-lp~~----~~~L~~L~l~~n~l~~-l~~~---~~~L~~L~L~~n~l~~-lp-~~~~l 152 (454)
T 1jl5_A 87 PEL---PPHLESLVASCNSLTE-LPEL----PQSLKSLLVDNNNLKA-LSDL---PPLLEYLGVSNNQLEK-LP-ELQNS 152 (454)
T ss_dssp CSC---CTTCSEEECCSSCCSS-CCCC----CTTCCEEECCSSCCSC-CCSC---CTTCCEEECCSSCCSS-CC-CCTTC
T ss_pred CCC---cCCCCEEEccCCcCCc-cccc----cCCCcEEECCCCccCc-ccCC---CCCCCEEECcCCCCCC-Cc-ccCCC
Confidence 432 3677777777777774 5543 3577777777777773 2221 1577777777777774 56 47777
Q ss_pred CCCCEEeCCCCcCcccCCccccCCCCCcEEEeccccCCcccccCCCCCCcccccCCCcccccCCCCCccccCCCCCcEEE
Q 045553 255 VNLEVLDLSRNFLSGIVPSELGMCKQLKVLVLRNDYGPLYSREHGDLPIQPVVDGGEDYNFFDGGLPDSITRLPNLRVFW 334 (1082)
Q Consensus 255 ~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~n~~~~~~~~~~~l~~~~~~~~~~~~n~~~~~~p~~l~~l~~L~~L~ 334 (1082)
++|++|++++|++++ +|..+ ++|++|++++|. +.+ +| .++++++|++|+
T Consensus 153 ~~L~~L~l~~N~l~~-lp~~~---~~L~~L~L~~n~-------------------------l~~-l~-~~~~l~~L~~L~ 201 (454)
T 1jl5_A 153 SFLKIIDVDNNSLKK-LPDLP---PSLEFIAAGNNQ-------------------------LEE-LP-ELQNLPFLTAIY 201 (454)
T ss_dssp TTCCEEECCSSCCSC-CCCCC---TTCCEEECCSSC-------------------------CSS-CC-CCTTCTTCCEEE
T ss_pred CCCCEEECCCCcCcc-cCCCc---ccccEEECcCCc-------------------------CCc-Cc-cccCCCCCCEEE
Confidence 777777777777774 45433 477777776643 332 34 467777777777
Q ss_pred cCCCcccCCCCcccccccCCCeEEcCCccccCCCCccccCCCCCCEEecCCCcCcccCCCCcccCcccEEEecCCcce
Q 045553 335 APNLNLEGIFPQNWELCSKLEMLNLAHNFFTGQIPASLGNCKSLYFLDLSSNNLTGLLPEEVSVPCMAVFNVSQNLLS 412 (1082)
Q Consensus 335 l~~n~l~~~~~~~l~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~l~~L~~L~l~~N~l~ 412 (1082)
+++|.+.++ |.. .++|++|++++|+++ .+|. +..+++|+.|++++|++++. |.. .++|+.|++++|+++
T Consensus 202 l~~N~l~~l-~~~---~~~L~~L~l~~n~l~-~lp~-~~~l~~L~~L~l~~N~l~~l-~~~--~~~L~~L~l~~N~l~ 270 (454)
T 1jl5_A 202 ADNNSLKKL-PDL---PLSLESIVAGNNILE-ELPE-LQNLPFLTTIYADNNLLKTL-PDL--PPSLEALNVRDNYLT 270 (454)
T ss_dssp CCSSCCSSC-CCC---CTTCCEEECCSSCCS-SCCC-CTTCTTCCEEECCSSCCSSC-CSC--CTTCCEEECCSSCCS
T ss_pred CCCCcCCcC-CCC---cCcccEEECcCCcCC-cccc-cCCCCCCCEEECCCCcCCcc-ccc--ccccCEEECCCCccc
Confidence 777777763 222 247777777777777 5663 77777777777777777753 322 356777777777665
No 48
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=100.00 E-value=1.2e-40 Score=373.14 Aligned_cols=287 Identities=31% Similarity=0.499 Sum_probs=214.5
Q ss_pred CHHHHHHHHhcccCCCCCCCCCCCCCCCCce--eeeeEeeCCC--CCeeeeecCCCccccccccCCCCCCCCCCCCcccC
Q 045553 1 KNALLQLKSAITEDPLGLTSNWNPKDTDSCS--WHGVTCDPLS--GRVTSLNLSSNLSRTSCSLLSLPPAAGPGGNFSFH 76 (1082)
Q Consensus 1 ~~~l~~~k~~~~~~~~~~~~~W~~~~~~~c~--w~gv~C~~~~--~~v~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 76 (1082)
++||++||+++. ||. .+++|.. ++|||. |.||+|+..+ ++|+.|+|++
T Consensus 8 ~~aL~~~k~~~~-~~~-~l~~W~~-~~~~C~~~w~gv~C~~~~~~~~l~~L~L~~------------------------- 59 (313)
T 1ogq_A 8 KQALLQIKKDLG-NPT-TLSSWLP-TTDCCNRTWLGVLCDTDTQTYRVNNLDLSG------------------------- 59 (313)
T ss_dssp HHHHHHHHHHTT-CCG-GGTTCCT-TSCTTTTCSTTEEECCSSSCCCEEEEEEEC-------------------------
T ss_pred HHHHHHHHHhcC-Ccc-cccCCCC-CCCCCcCCCcceEeCCCCCCceEEEEECCC-------------------------
Confidence 479999999995 775 7899975 578998 9999998655 8999999976
Q ss_pred cCcccccccccCcccCCCCCCccc--cccccccCCCCCCEEEccc-CCCcccCChhhcCCCCCCEEeCcCCCCCCCCCcc
Q 045553 77 FPCLQLHQHDRGNINSNSSDKLSG--NLSRAIGDLTQLRVLLLAF-NGFSGELPLEIGQLSLLEILDLSFNSFHGPIPPT 153 (1082)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~l~g--~l~~~l~~l~~L~~L~L~~-n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~ 153 (1082)
+++.| .+|++|.++++|++|+|++ |.+.+.+|..|+++++|++|+|++|.+++.+|..
T Consensus 60 -------------------~~l~~~~~~~~~l~~l~~L~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~ 120 (313)
T 1ogq_A 60 -------------------LNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDF 120 (313)
T ss_dssp -------------------CCCSSCEECCGGGGGCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGG
T ss_pred -------------------CCccCCcccChhHhCCCCCCeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHH
Confidence 45667 7889999999999999995 9999999999999999999999999999899999
Q ss_pred ccCCCCCCeEEccCcccccccCccccCCCCCcEEEcccCcccccCCcccccccc-cccEEEcccCccCCCCCccccCCCC
Q 045553 154 LQNCSSLRLINLSGNQFNGTIPAFFGQSPGFQVVSLSFNLLSGSVPEEFGDNCV-SLEHILLAANSLTGSIPPSLGNCTE 232 (1082)
Q Consensus 154 l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~-~L~~L~L~~N~l~~~~~~~~~~l~~ 232 (1082)
|.++++|++|+|++|++++.+|..|..+++|++|+|++|++++.+|..++. ++ +|++|++++|++++.+|..+..++
T Consensus 121 ~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~-l~~~L~~L~L~~N~l~~~~~~~~~~l~- 198 (313)
T 1ogq_A 121 LSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGS-FSKLFTSMTISRNRLTGKIPPTFANLN- 198 (313)
T ss_dssp GGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEECCSSCCEEECCGGGGC-CCTTCCEEECCSSEEEEECCGGGGGCC-
T ss_pred HhCCCCCCEEeCCCCccCCcCChHHhcCCCCCeEECcCCcccCcCCHHHhh-hhhcCcEEECcCCeeeccCChHHhCCc-
Confidence 999999999999999999889999999999999999999888778877764 44 677777777777777776666665
Q ss_pred ccEEEccCCcCCCCcCccccCCCCCCEEeCCCCcCcccCCccccCCCCCcEEEeccccCCcccccCCCCCCcccccCCCc
Q 045553 233 LRSLLLSSNMLQGDIPSSFGQLVNLEVLDLSRNFLSGIVPSELGMCKQLKVLVLRNDYGPLYSREHGDLPIQPVVDGGED 312 (1082)
Q Consensus 233 L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~n~~~~~~~~~~~l~~~~~~~~~~~ 312 (1082)
|++|++++|++++..|..|..+++|++|+|++|++++.+|.
T Consensus 199 L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~--------------------------------------- 239 (313)
T 1ogq_A 199 LAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLGK--------------------------------------- 239 (313)
T ss_dssp CSEEECCSSEEEECCGGGCCTTSCCSEEECCSSEECCBGGG---------------------------------------
T ss_pred ccEEECcCCcccCcCCHHHhcCCCCCEEECCCCceeeecCc---------------------------------------
Confidence 77777777776666666666666666666666666543322
Q ss_pred ccccCCCCCccccCCCCCcEEEcCCCcccCCCCcccccccCCCeEEcCCccccCCCCccccCCCCCCEEecCCCc
Q 045553 313 YNFFDGGLPDSITRLPNLRVFWAPNLNLEGIFPQNWELCSKLEMLNLAHNFFTGQIPASLGNCKSLYFLDLSSNN 387 (1082)
Q Consensus 313 ~n~~~~~~p~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~Ls~N~ 387 (1082)
+..+++|++|++++|.+.+..|..+..+++|++|+|++|++++.+|.. .++++|+.|++++|+
T Consensus 240 -----------~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ip~~-~~l~~L~~l~l~~N~ 302 (313)
T 1ogq_A 240 -----------VGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQG-GNLQRFDVSAYANNK 302 (313)
T ss_dssp -----------CCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEEEEECCCS-TTGGGSCGGGTCSSS
T ss_pred -----------ccccCCCCEEECcCCcccCcCChHHhcCcCCCEEECcCCcccccCCCC-ccccccChHHhcCCC
Confidence 223334444444444444444555555555555555555555555544 455555555555554
No 49
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=100.00 E-value=1.9e-39 Score=384.68 Aligned_cols=365 Identities=22% Similarity=0.231 Sum_probs=222.4
Q ss_pred CCCCEEEcccCCCcccCChhhcCCCCCCEEeCcCCCCCCCC-CccccCCCCCCeEEccCcccccccCccccCCCCCcEEE
Q 045553 110 TQLRVLLLAFNGFSGELPLEIGQLSLLEILDLSFNSFHGPI-PPTLQNCSSLRLINLSGNQFNGTIPAFFGQSPGFQVVS 188 (1082)
Q Consensus 110 ~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~-p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 188 (1082)
++|++|+|++|.+++..|..|+++++|++|+|++|.+.+.+ +..|.++++|++|+|++|++++..|..|+++++|++|+
T Consensus 30 ~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~~~~~i~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~ 109 (455)
T 3v47_A 30 AHVNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILKLDYNQFLQLETGAFNGLANLEVLT 109 (455)
T ss_dssp TTCCEEECCSSCCCEECTTTTSSCTTCCEEECCCCSTTCEECTTTTTTCTTCCEEECTTCTTCEECTTTTTTCTTCCEEE
T ss_pred CccCEEEecCCccCcCChhHhccCccccEEECcCCcccceECcccccccccCCEEeCCCCccCccChhhccCcccCCEEe
Confidence 46677777777776666666777777777777777665443 44566777777777777777666666677777777777
Q ss_pred cccCcccccCCcc-cccccccccEEEcccCccCCCCCcc-ccCCCCccEEEccCCcCCCCcCccccCC--CCCCEEeCCC
Q 045553 189 LSFNLLSGSVPEE-FGDNCVSLEHILLAANSLTGSIPPS-LGNCTELRSLLLSSNMLQGDIPSSFGQL--VNLEVLDLSR 264 (1082)
Q Consensus 189 L~~N~l~~~~p~~-~~~~l~~L~~L~L~~N~l~~~~~~~-~~~l~~L~~L~L~~N~l~~~~p~~~~~l--~~L~~L~Ls~ 264 (1082)
|++|++++.+|.. .+..+++|++|+|++|++++..|.. +.++++|++|++++|++++..+..+..+ .+|+.|++++
T Consensus 110 L~~n~l~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~~~L~~L~l~~ 189 (455)
T 3v47_A 110 LTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQPASFFLNMRRFHVLDLTFNKVKSICEEDLLNFQGKHFTLLRLSS 189 (455)
T ss_dssp CTTSCCBTHHHHSSTTTTCTTCCEEECCSSBCCSCCCCGGGGGCTTCCEEECTTCCBSCCCTTTSGGGTTCEEEEEECTT
T ss_pred CCCCCCCccccCcccccCcccCCEEECCCCccCccCcccccCCCCcccEEeCCCCcccccChhhhhcccccccccccccc
Confidence 7777766543332 2335667777777777777655554 5667777777777777766666666555 5667777777
Q ss_pred CcCcccCCccc--------cCCCCCcEEEeccccCCcccccCCCCCCcccccCCCcccccCCCCCccccCC---CCCcEE
Q 045553 265 NFLSGIVPSEL--------GMCKQLKVLVLRNDYGPLYSREHGDLPIQPVVDGGEDYNFFDGGLPDSITRL---PNLRVF 333 (1082)
Q Consensus 265 N~l~~~~p~~l--------~~l~~L~~L~l~~n~~~~~~~~~~~l~~~~~~~~~~~~n~~~~~~p~~l~~l---~~L~~L 333 (1082)
|.+.+..+..+ ..+++|++|++++| .+.+..|..+..+ ++|+.|
T Consensus 190 n~l~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~n-------------------------~l~~~~~~~~~~~~~~~~L~~L 244 (455)
T 3v47_A 190 ITLQDMNEYWLGWEKCGNPFKNTSITTLDLSGN-------------------------GFKESMAKRFFDAIAGTKIQSL 244 (455)
T ss_dssp CBCTTCSTTCTTHHHHCCTTTTCEEEEEECTTS-------------------------CCCHHHHHHHHHHTTTCCEEEE
T ss_pred CcccccchhhccccccccccccceeeeEecCCC-------------------------cccccchhhhhccccccceeeE
Confidence 77665443322 24455555555543 2222233333221 344444
Q ss_pred EcCCCcccCCCCcccccccCCCeEEcCCccccCCCCccccC--CCCCCEEecCCCcCcccCCCCcccCcccEEEecCCcc
Q 045553 334 WAPNLNLEGIFPQNWELCSKLEMLNLAHNFFTGQIPASLGN--CKSLYFLDLSSNNLTGLLPEEVSVPCMAVFNVSQNLL 411 (1082)
Q Consensus 334 ~l~~n~l~~~~~~~l~~l~~L~~L~Ls~N~i~~~~p~~~~~--l~~L~~L~Ls~N~l~~~~p~~~~l~~L~~L~l~~N~l 411 (1082)
++++|.+.+.. +..+.+.+..+..+.. .++|+.|+|++|++++.+|..+
T Consensus 245 ~l~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~--------------- 295 (455)
T 3v47_A 245 ILSNSYNMGSS--------------FGHTNFKDPDNFTFKGLEASGVKTCDLSKSKIFALLKSVF--------------- 295 (455)
T ss_dssp ECTTCTTTSCC--------------TTCCSSCCCCTTTTGGGTTSCCCEEECCSSCCCEECTTTT---------------
T ss_pred eeccccccccc--------------cchhhhccCcccccccccccCceEEEecCccccccchhhc---------------
Confidence 44444332210 1111222112222222 2345555555555443222211
Q ss_pred eecCCCCCCcccccccccccccceeeeeecccccccccccCcCCCCCCCCCceeEeeccCCcccCCCCCccccCCCcccc
Q 045553 412 SGEIPRISHSECSKMSVNWSMSQVDLIGFYTAFFYENALTSCAPFSSPSNGLFILHDFSNNLFTGPVPPFLIDSDSLSSR 491 (1082)
Q Consensus 412 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~n~~~g~~p~~~~~~~~l~~~ 491 (1082)
T Consensus 296 -------------------------------------------------------------------------------- 295 (455)
T 3v47_A 296 -------------------------------------------------------------------------------- 295 (455)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccceeeeccCCCccccCCcccccccCCceeEEEccCCcccccCCccccccCCcccEEEccCCcccccCccccCCCCCCCE
Q 045553 492 PYYGFWLSGNSLKGNLSTYPFDLCLSLDGLIFDIGNNKLIGEVPSDMGSHCKCMKFLSMAGNEFVGLIPQSFTNFDSLRN 571 (1082)
Q Consensus 492 ~~~~~~~~~n~~~~~l~~~p~~~~~~~~l~~l~l~~n~l~~~ip~~~~~~~~~L~~L~L~~N~i~~~~~~~~~~l~~L~~ 571 (1082)
..+++|++|+|++|+|++..|..|..+++|++
T Consensus 296 ------------------------------------------------~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~ 327 (455)
T 3v47_A 296 ------------------------------------------------SHFTDLEQLTLAQNEINKIDDNAFWGLTHLLK 327 (455)
T ss_dssp ------------------------------------------------TTCTTCCEEECTTSCCCEECTTTTTTCTTCCE
T ss_pred ------------------------------------------------ccCCCCCEEECCCCcccccChhHhcCcccCCE
Confidence 12334666667777776666777777777777
Q ss_pred EEccCCCCCCCCcccccCCCCCCEEEcCCCcCCccCchhhhcCcccchhhccCcccCCCCCccccCCcccceecccCccc
Q 045553 572 LNLSRNHLQGPLPSYINKMEDLKFLSLSLNNFTGAIPWELTQLASLEVLELSANSLSGEIPSEFSKLEHLNVLRLDHNNL 651 (1082)
Q Consensus 572 L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l 651 (1082)
|+|++|.+++..|..|..+++|++|+|++|++++..|..|.++++|++|+|++|+|++..+..|..+++|++|+|++|++
T Consensus 328 L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l 407 (455)
T 3v47_A 328 LNLSQNFLGSIDSRMFENLDKLEVLDLSYNHIRALGDQSFLGLPNLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPW 407 (455)
T ss_dssp EECCSSCCCEECGGGGTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCB
T ss_pred EECCCCccCCcChhHhcCcccCCEEECCCCcccccChhhccccccccEEECCCCccccCCHhHhccCCcccEEEccCCCc
Confidence 77777777766677777777777777777777777777777777888888888887766666677778888888888888
Q ss_pred CCCCC
Q 045553 652 TGRIP 656 (1082)
Q Consensus 652 ~~~~p 656 (1082)
++..|
T Consensus 408 ~~~~~ 412 (455)
T 3v47_A 408 DCSCP 412 (455)
T ss_dssp CCCTT
T ss_pred ccCCC
Confidence 76655
No 50
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}
Probab=100.00 E-value=4.8e-40 Score=368.70 Aligned_cols=258 Identities=27% Similarity=0.454 Sum_probs=214.9
Q ss_pred hcCccccceecccCceEEEEEEEc-CCeEEEEEEeecCccccHHHHHHHHHHHhccCCCceeeEeeeeccCCeEEEEEee
Q 045553 800 TAGFNVQNCIGSGGFGATYKAEII-PGVVVAVKRLSVGRFQGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFLIYNY 878 (1082)
Q Consensus 800 ~~~~~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~ 878 (1082)
.++|++.++||+|+||+||+|... +++.||+|++........+.+.+|++++++++||||+++++++.+++..++||||
T Consensus 9 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~ 88 (310)
T 3s95_A 9 PSDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEY 88 (310)
T ss_dssp GGGEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESCCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred hhHeeccceecCCCCEEEEEEEECCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCcCcccEEEEEecCCeeEEEEEe
Confidence 357899999999999999999764 5899999998776666778899999999999999999999999999999999999
Q ss_pred cCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCCCCCc
Q 045553 879 LPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGTSETH 958 (1082)
Q Consensus 879 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~ 958 (1082)
+++++|.++++.. ...+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++........
T Consensus 89 ~~~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 164 (310)
T 3s95_A 89 IKGGTLRGIIKSM-DSQYPWSQRVSFAKDIASGMAYLHSM---NIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQ 164 (310)
T ss_dssp CTTCBHHHHHHHC-CTTSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSTTSEEECTTSCEEECCCTTCEECC-----
T ss_pred cCCCcHHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCcCeEEECCCCCEEEeecccceeccccccc
Confidence 9999999999875 45699999999999999999999999 9999999999999999999999999999876543221
Q ss_pred c-------------ccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCC-CccHHHHHHHHH
Q 045553 959 A-------------TTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELISDKKALDPSFCSFGN-GFNIVAWASMLL 1024 (1082)
Q Consensus 959 ~-------------~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~-~~~~~~~~~~~~ 1024 (1082)
. .....||+.|+|||++.+..++.++||||||+++|||++|..|+......... ..........
T Consensus 165 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~-- 242 (310)
T 3s95_A 165 PEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDFGLNVRGFLDR-- 242 (310)
T ss_dssp ---------------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBCTTSSBCHHHHHHH--
T ss_pred ccccccccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcchhhhHHHHhhhhhccccc--
Confidence 1 12467999999999999999999999999999999999999998753322111 1111111110
Q ss_pred hcCCCccccccccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhhC
Q 045553 1025 LQGRPCEFFTAGLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQLKQIQ 1078 (1082)
Q Consensus 1025 ~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L~~i~ 1078 (1082)
..+...+..+.+++.+|++.||++||++.|+++.|++++
T Consensus 243 ---------------~~~~~~~~~l~~li~~~l~~dP~~Rps~~~l~~~L~~l~ 281 (310)
T 3s95_A 243 ---------------YCPPNCPPSFFPITVRCCDLDPEKRPSFVKLEHWLETLR 281 (310)
T ss_dssp ---------------TCCTTCCTTHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred ---------------cCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 112233457899999999999999999999999999875
No 51
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Probab=100.00 E-value=7.2e-39 Score=358.68 Aligned_cols=284 Identities=31% Similarity=0.516 Sum_probs=233.0
Q ss_pred ccccccHHHHHHHhcCcccc------ceecccCceEEEEEEEcCCeEEEEEEeecCc----cccHHHHHHHHHHHhccCC
Q 045553 787 IGVQLTYENVVRATAGFNVQ------NCIGSGGFGATYKAEIIPGVVVAVKRLSVGR----FQGVQQFAAEIRTLGRVQH 856 (1082)
Q Consensus 787 ~~~~~~~~~~~~~~~~~~~~------~~lg~G~~g~Vy~a~~~~~~~vavK~~~~~~----~~~~~~~~~e~~~l~~l~h 856 (1082)
....|++.++..++.+|... +.||+|+||.||+|.. +++.||||++.... ....+.+.+|++++++++|
T Consensus 11 ~~~~~~~~~l~~~~~~f~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h 89 (307)
T 2nru_A 11 RFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQH 89 (307)
T ss_dssp CCEECCHHHHHHHTTTTCCSBTTTTCCEEEECSSEEEEEEES-SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCC
T ss_pred CCCcccHHHHHHHHcccccccccccCCccccCCCeEEEEEEE-CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCC
Confidence 34578999999999999877 8999999999999976 58899999986532 2346779999999999999
Q ss_pred CceeeEeeeeccCCeEEEEEeecCCCCHHHHHhhCC-CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEE
Q 045553 857 PNLVTLIGYHVSEAEMFLIYNYLPGGNLEKFIQDRP-RRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILL 935 (1082)
Q Consensus 857 ~niv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~~~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill 935 (1082)
|||+++++++.+.+..++||||+++++|.+++.... ...+++..+..++.|++.||+|||+. +|+||||||+||++
T Consensus 90 ~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dlkp~Nili 166 (307)
T 2nru_A 90 ENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHEN---HHIHRDIKSANILL 166 (307)
T ss_dssp TTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEE
T ss_pred CCeEEEEEEEecCCceEEEEEecCCCcHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhcC---CeecCCCCHHHEEE
Confidence 999999999999999999999999999999997532 34689999999999999999999999 99999999999999
Q ss_pred cCCCcEEEeecccceecCCCCCc-cccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCc
Q 045553 936 DNNLNAYLSDFGLARLLGTSETH-ATTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGF 1014 (1082)
Q Consensus 936 ~~~~~~kl~DfGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~ 1014 (1082)
+.++.+||+|||+++........ ......|++.|+|||.+.+ .++.++||||||+++|||++|+.||...... .
T Consensus 167 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~----~ 241 (307)
T 2nru_A 167 DEAFTAKISDFGLARASEKFAQTVMTSRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITGLPAVDEHREP----Q 241 (307)
T ss_dssp CTTCCEEECCCTTCEECCSCSSCEECSSCCSCGGGCCHHHHTT-EECTHHHHHHHHHHHHHHHHCCCSBCTTBSS----S
T ss_pred cCCCcEEEeecccccccccccccccccccCCCcCcCChHHhcC-CCCccchhHHHHHHHHHHHHCCCCcccCcch----H
Confidence 99999999999999876543322 2334579999999998865 5789999999999999999999999754322 2
Q ss_pred cHHHHHHHHHhcCC-CccccccccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhhCCC
Q 045553 1015 NIVAWASMLLLQGR-PCEFFTAGLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQLKQIQPP 1080 (1082)
Q Consensus 1015 ~~~~~~~~~~~~~~-~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L~~i~~~ 1080 (1082)
....+......... ..+.++..+ ...+...+..+.+++.+|++.+|++||++.||+++|+++..+
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~l~~~L~~l~~s 307 (307)
T 2nru_A 242 LLLDIKEEIEDEEKTIEDYIDKKM-NDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEMTAS 307 (307)
T ss_dssp BTTHHHHHHHTTSCCHHHHSCSSC-SCCCHHHHHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHC--
T ss_pred HHHHHHHHhhhhhhhhhhhccccc-cccchHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhcC
Confidence 22333333322222 223344433 235667788999999999999999999999999999998753
No 52
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*
Probab=100.00 E-value=3.2e-39 Score=353.89 Aligned_cols=259 Identities=24% Similarity=0.395 Sum_probs=218.6
Q ss_pred hcCccccceecccCceEEEEEEEcCCeEEEEEEeecCccccHHHHHHHHHHHhccCCCceeeEeeeeccCCeEEEEEeec
Q 045553 800 TAGFNVQNCIGSGGFGATYKAEIIPGVVVAVKRLSVGRFQGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFLIYNYL 879 (1082)
Q Consensus 800 ~~~~~~~~~lg~G~~g~Vy~a~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~~ 879 (1082)
.++|++.+.||+|+||.||+|+..++..||||++..... ..+++.+|++++++++||||+++++++.+....++||||+
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 85 (268)
T 3sxs_A 7 REEITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGSM-SEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTEYI 85 (268)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECBTTB-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEECC
T ss_pred hhheeeeeeeccCCCceEEEEEecCceeEEEEEeccCCC-cHHHHHHHHHHHHhCCCCCEeeEEEEEccCCceEEEEEcc
Confidence 457999999999999999999998888999999976543 4577899999999999999999999999999999999999
Q ss_pred CCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCCCCCcc
Q 045553 880 PGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGTSETHA 959 (1082)
Q Consensus 880 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~ 959 (1082)
++++|.+++... ...+++..++.++.|++.|++|||+. +|+||||||+||+++.++.+||+|||.+..........
T Consensus 86 ~~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~ 161 (268)
T 3sxs_A 86 SNGCLLNYLRSH-GKGLEPSQLLEMCYDVCEGMAFLESH---QFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVS 161 (268)
T ss_dssp TTCBHHHHHHHH-GGGCCHHHHHHHHHHHHHHHHHHHHT---TEEESSCSGGGEEECTTCCEEECCTTCEEECCTTCEEE
T ss_pred CCCcHHHHHHHc-CCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCcCcceEEECCCCCEEEccCccceecchhhhhc
Confidence 999999999875 34689999999999999999999999 99999999999999999999999999998876554444
Q ss_pred ccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCccCCCCCccHHHHHHHHHhcCCCccccccccC
Q 045553 960 TTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELIS-DKKALDPSFCSFGNGFNIVAWASMLLLQGRPCEFFTAGLW 1038 (1082)
Q Consensus 960 ~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 1038 (1082)
.....+++.|+|||++.+..++.++||||+|+++|||++ |+.||+.. .............. .
T Consensus 162 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~--------~~~~~~~~~~~~~~-~-------- 224 (268)
T 3sxs_A 162 SVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLY--------TNSEVVLKVSQGHR-L-------- 224 (268)
T ss_dssp CCSCCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTS--------CHHHHHHHHHTTCC-C--------
T ss_pred ccCCCcCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCcccc--------ChHHHHHHHHcCCC-C--------
Confidence 445567788999999999899999999999999999999 99998632 12222222222111 1
Q ss_pred CCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhhCCCC
Q 045553 1039 DCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQLKQIQPPA 1081 (1082)
Q Consensus 1039 ~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L~~i~~~~ 1081 (1082)
..+...+..+.+++.+|++.+|++|||+.|+++.|+.+++..
T Consensus 225 -~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~~~ 266 (268)
T 3sxs_A 225 -YRPHLASDTIYQIMYSCWHELPEKRPTFQQLLSSIEPLREKD 266 (268)
T ss_dssp -CCCTTSCHHHHHHHHHTTCSSGGGSCCHHHHHHHHGGGCC--
T ss_pred -CCCCcChHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhhcc
Confidence 112334567999999999999999999999999999998753
No 53
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Probab=100.00 E-value=4.5e-39 Score=358.08 Aligned_cols=251 Identities=23% Similarity=0.403 Sum_probs=213.5
Q ss_pred hcCccccceecccCceEEEEEEE-cCCeEEEEEEeecCccccHHHHHHHHHHHhccCCCceeeEeeeeccCCeEEEEEee
Q 045553 800 TAGFNVQNCIGSGGFGATYKAEI-IPGVVVAVKRLSVGRFQGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFLIYNY 878 (1082)
Q Consensus 800 ~~~~~~~~~lg~G~~g~Vy~a~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~ 878 (1082)
..+|++.+.||+|+||+||+|.. .+++.||||++........+.+.+|+.++++++||||+++++++...+..++||||
T Consensus 19 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~ 98 (297)
T 3fxz_A 19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEY 98 (297)
T ss_dssp GGTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred hhceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeecccccHHHHHHHHHHHHhcCCCCCCCeEeEEEEECCEEEEEEEC
Confidence 46799999999999999999964 56899999999877666678899999999999999999999999999999999999
Q ss_pred cCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCCCCCc
Q 045553 879 LPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGTSETH 958 (1082)
Q Consensus 879 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~ 958 (1082)
+++|+|.+++... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++........
T Consensus 99 ~~~~~L~~~~~~~---~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~- 171 (297)
T 3fxz_A 99 LAGGSLTDVVTET---CMDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS- 171 (297)
T ss_dssp CTTCBHHHHHHHS---CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEECCSTTC-
T ss_pred CCCCCHHHHHhhc---CCCHHHHHHHHHHHHHHHHHHHhC---CceeCCCCHHHEEECCCCCEEEeeCCCceecCCccc-
Confidence 9999999999864 589999999999999999999999 999999999999999999999999999987654433
Q ss_pred cccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCCCccccccccC
Q 045553 959 ATTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQGRPCEFFTAGLW 1038 (1082)
Q Consensus 959 ~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 1038 (1082)
......||+.|+|||++.+..++.++||||+||++|||++|+.||... ............+... .
T Consensus 172 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~--------~~~~~~~~~~~~~~~~-~------ 236 (297)
T 3fxz_A 172 KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNE--------NPLRALYLIATNGTPE-L------ 236 (297)
T ss_dssp CBCCCCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTS--------CHHHHHHHHHHHCSCC-C------
T ss_pred ccCCccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC--------CHHHHHHHHHhCCCCC-C------
Confidence 334567999999999999999999999999999999999999999632 1222222222222111 1
Q ss_pred CCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 045553 1039 DCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQ 1073 (1082)
Q Consensus 1039 ~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~ 1073 (1082)
..+...+..+.+++.+|++.||++|||+.|++++
T Consensus 237 -~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h 270 (297)
T 3fxz_A 237 -QNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQH 270 (297)
T ss_dssp -SCGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred -CCccccCHHHHHHHHHHccCChhHCcCHHHHhhC
Confidence 1234456789999999999999999999999863
No 54
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A
Probab=100.00 E-value=2.5e-39 Score=371.44 Aligned_cols=258 Identities=24% Similarity=0.423 Sum_probs=214.4
Q ss_pred hcCccccceecccCceEEEEEEEc--------CCeEEEEEEeecCc-cccHHHHHHHHHHHhcc-CCCceeeEeeeeccC
Q 045553 800 TAGFNVQNCIGSGGFGATYKAEII--------PGVVVAVKRLSVGR-FQGVQQFAAEIRTLGRV-QHPNLVTLIGYHVSE 869 (1082)
Q Consensus 800 ~~~~~~~~~lg~G~~g~Vy~a~~~--------~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~ 869 (1082)
.++|++.+.||+|+||.||+|+.. ++..||||+++... ....+.+.+|+++++++ +||||+++++++.+.
T Consensus 80 ~~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~ 159 (370)
T 2psq_A 80 RDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD 159 (370)
T ss_dssp GGGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEECSS
T ss_pred HHHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEccC
Confidence 357899999999999999999752 35689999997653 23456789999999999 899999999999999
Q ss_pred CeEEEEEeecCCCCHHHHHhhCC--------------CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEE
Q 045553 870 AEMFLIYNYLPGGNLEKFIQDRP--------------RRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILL 935 (1082)
Q Consensus 870 ~~~~lV~E~~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill 935 (1082)
+..|+||||+++|+|.+++.... ...+++..+..++.||+.||+|||+. +|+||||||+||++
T Consensus 160 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll 236 (370)
T 2psq_A 160 GPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLV 236 (370)
T ss_dssp SSCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEE
T ss_pred CCEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CeeccccchhhEEE
Confidence 99999999999999999998753 24589999999999999999999999 99999999999999
Q ss_pred cCCCcEEEeecccceecCCCCC-ccccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCccCCCCC
Q 045553 936 DNNLNAYLSDFGLARLLGTSET-HATTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELIS-DKKALDPSFCSFGNG 1013 (1082)
Q Consensus 936 ~~~~~~kl~DfGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~ellt-g~~p~~~~~~~~~~~ 1013 (1082)
+.++.+||+|||+++....... .......+++.|+|||++.+..++.++|||||||++|||++ |+.||.... .
T Consensus 237 ~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~p~~~~~-----~ 311 (370)
T 2psq_A 237 TENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIP-----V 311 (370)
T ss_dssp CTTCCEEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCC-----G
T ss_pred CCCCCEEEccccCCcccCcccceecccCCCcccceECHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCCCCCC-----H
Confidence 9999999999999987654332 22334567889999999999999999999999999999999 999986431 1
Q ss_pred ccHHHHHHHHHhcCCCccccccccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhhC
Q 045553 1014 FNIVAWASMLLLQGRPCEFFTAGLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQLKQIQ 1078 (1082)
Q Consensus 1014 ~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L~~i~ 1078 (1082)
... ... +..+.. ...+...+.++.+++.+||+.+|++||++.|+++.|+++.
T Consensus 312 ~~~---~~~-~~~~~~---------~~~~~~~~~~l~~li~~~l~~dP~~Rpt~~ell~~L~~il 363 (370)
T 2psq_A 312 EEL---FKL-LKEGHR---------MDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIL 363 (370)
T ss_dssp GGH---HHH-HHTTCC---------CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred HHH---HHH-HhcCCC---------CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 111 111 222211 1223455678999999999999999999999999999864
No 55
>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=2.1e-39 Score=355.53 Aligned_cols=257 Identities=25% Similarity=0.397 Sum_probs=217.6
Q ss_pred cCccccceecccCceEEEEEEEcCCeEEEEEEeecCccccHHHHHHHHHHHhccCCCceeeEeeeeccCCeEEEEEeecC
Q 045553 801 AGFNVQNCIGSGGFGATYKAEIIPGVVVAVKRLSVGRFQGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFLIYNYLP 880 (1082)
Q Consensus 801 ~~~~~~~~lg~G~~g~Vy~a~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~~~ 880 (1082)
.+|++.+.||+|+||.||+|...+++.||+|++.... ...+++.+|++++++++||||+++++++.+....++||||++
T Consensus 10 ~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 88 (269)
T 4hcu_A 10 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGA-MSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFME 88 (269)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTEEEEEEEECTTS-BCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEECCT
T ss_pred hhceeeheecCCCccEEEEEEecCCCeEEEEEecccc-cCHHHHHHHHHHHHhCCCCCEeeEEEEEecCCceEEEEEeCC
Confidence 5689999999999999999998889999999997654 345779999999999999999999999999999999999999
Q ss_pred CCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCCCCCccc
Q 045553 881 GGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGTSETHAT 960 (1082)
Q Consensus 881 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~~ 960 (1082)
+++|.++++.. ...+++..++.++.|++.|++|||+. +|+||||||+||+++.++.+||+|||+++..........
T Consensus 89 ~~~L~~~l~~~-~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~ 164 (269)
T 4hcu_A 89 HGCLSDYLRTQ-RGLFAAETLLGMCLDVCEGMAYLEEA---CVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSS 164 (269)
T ss_dssp TCBHHHHHHTT-TTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECGGGCEEECCTTGGGGBCCHHHHST
T ss_pred CCcHHHHHHhc-CcccCHHHHHHHHHHHHHHHHHHHhC---CeecCCcchheEEEcCCCCEEeccccccccccccccccc
Confidence 99999999765 45689999999999999999999999 999999999999999999999999999987654433334
Q ss_pred cCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCccCCCCCccHHHHHHHHHhcCCCccccccccCC
Q 045553 961 TDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELIS-DKKALDPSFCSFGNGFNIVAWASMLLLQGRPCEFFTAGLWD 1039 (1082)
Q Consensus 961 ~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 1039 (1082)
....+++.|+|||++.+..++.++||||+|+++|||++ |+.||... ...+......... ..
T Consensus 165 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~--------~~~~~~~~~~~~~----------~~ 226 (269)
T 4hcu_A 165 TGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENR--------SNSEVVEDISTGF----------RL 226 (269)
T ss_dssp TSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTC--------CHHHHHHHHHTTC----------CC
T ss_pred cCcccccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCCC--------CHHHHHHHHhcCc----------cC
Confidence 44567889999999999999999999999999999999 89998632 2223333322211 11
Q ss_pred CCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhhCCC
Q 045553 1040 CGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQLKQIQPP 1080 (1082)
Q Consensus 1040 ~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L~~i~~~ 1080 (1082)
..+...+..+.+++.+|++.+|++||++.|++++|+++.+.
T Consensus 227 ~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~l~~~ 267 (269)
T 4hcu_A 227 YKPRLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAES 267 (269)
T ss_dssp CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred CCCCcCCHHHHHHHHHHccCCcccCcCHHHHHHHHHHHHHc
Confidence 12333456799999999999999999999999999988643
No 56
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*
Probab=100.00 E-value=2.7e-39 Score=361.79 Aligned_cols=260 Identities=28% Similarity=0.454 Sum_probs=207.5
Q ss_pred HhcCccccceecccCceEEEEEEEcCCeEEEEEEeecCcc--ccHHHHHHHHHHHhccCCCceeeEeeeeccCCeEEEEE
Q 045553 799 ATAGFNVQNCIGSGGFGATYKAEIIPGVVVAVKRLSVGRF--QGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFLIY 876 (1082)
Q Consensus 799 ~~~~~~~~~~lg~G~~g~Vy~a~~~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 876 (1082)
...+|++.+.||+|+||+||+|+. +|+.||||++..... ...+++.+|++++++++||||+++++++.+....++||
T Consensus 35 ~~~~y~i~~~lG~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 113 (309)
T 3p86_A 35 PWCDLNIKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVT 113 (309)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEE-TTEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTCCEEEE
T ss_pred ChhHceeeeEeecCCCeEEEEEEE-CCCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCceEEEE
Confidence 456799999999999999999977 589999999875542 34567899999999999999999999999999999999
Q ss_pred eecCCCCHHHHHhhCC-CCCCCHHHHHHHHHHHHHHHHHHhhCCCCC--eEeccCCCCCEEEcCCCcEEEeecccceecC
Q 045553 877 NYLPGGNLEKFIQDRP-RRTVEWSMLHKIALDVARALAYLHDECVPR--VLHRDIKPSNILLDNNLNAYLSDFGLARLLG 953 (1082)
Q Consensus 877 E~~~~gsL~~~l~~~~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~--ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~ 953 (1082)
||+++|+|.+++.... ...+++..++.++.|++.||+|||+. + |+||||||+||+++.++.+||+|||+++...
T Consensus 114 e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~~ 190 (309)
T 3p86_A 114 EYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNR---NPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKA 190 (309)
T ss_dssp ECCTTCBHHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHHHTS---SSCCCCTTCCGGGEEECTTCCEEECCCC------
T ss_pred ecCCCCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcC---CCCEECCCCChhhEEEeCCCcEEECCCCCCcccc
Confidence 9999999999998643 12489999999999999999999999 8 9999999999999999999999999998654
Q ss_pred CCCCccccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCCCcccc
Q 045553 954 TSETHATTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQGRPCEFF 1033 (1082)
Q Consensus 954 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1033 (1082)
... .......||+.|+|||++.+..++.++||||||+++|||++|+.||... ...+............
T Consensus 191 ~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf~~~--------~~~~~~~~~~~~~~~~--- 258 (309)
T 3p86_A 191 STF-LSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNL--------NPAQVVAAVGFKCKRL--- 258 (309)
T ss_dssp ------------CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTTS--------CHHHHHHHHHHSCCCC---
T ss_pred ccc-cccccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCC--------CHHHHHHHHHhcCCCC---
Confidence 322 2233457999999999999999999999999999999999999999732 2223333222222111
Q ss_pred ccccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhhCCC
Q 045553 1034 TAGLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQLKQIQPP 1080 (1082)
Q Consensus 1034 d~~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L~~i~~~ 1080 (1082)
..+...+.++.+++.+||+.+|++||++.||++.|+.+...
T Consensus 259 ------~~~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~~L~~~~~~ 299 (309)
T 3p86_A 259 ------EIPRNLNPQVAAIIEGCWTNEPWKRPSFATIMDLLRPLIKS 299 (309)
T ss_dssp ------CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHC-
T ss_pred ------CCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHh
Confidence 22344556899999999999999999999999999987553
No 57
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Probab=100.00 E-value=4.6e-39 Score=362.78 Aligned_cols=258 Identities=25% Similarity=0.372 Sum_probs=212.6
Q ss_pred hcCccccceecccCceEEEEEEEc----CCeEEEEEEeecCc-cccHHHHHHHHHHHhccCCCceeeEeeeeccCCeEEE
Q 045553 800 TAGFNVQNCIGSGGFGATYKAEII----PGVVVAVKRLSVGR-FQGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFL 874 (1082)
Q Consensus 800 ~~~~~~~~~lg~G~~g~Vy~a~~~----~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 874 (1082)
..+|++.+.||+|+||.||+|... .+..||||++.... ....+.+.+|++++++++||||+++++++.+.+..++
T Consensus 48 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 127 (325)
T 3kul_A 48 ASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMI 127 (325)
T ss_dssp GGGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECGGGCCEE
T ss_pred hhHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCccEE
Confidence 356899999999999999999774 35679999997653 3445679999999999999999999999999999999
Q ss_pred EEeecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCC
Q 045553 875 IYNYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGT 954 (1082)
Q Consensus 875 V~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~ 954 (1082)
||||+++++|.++++.. ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++....
T Consensus 128 v~e~~~~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 203 (325)
T 3kul_A 128 VTEYMENGSLDTFLRTH-DGQFTIMQLVGMLRGVGAGMRYLSDL---GYVHRDLAARNVLVDSNLVCKVSDFGLSRVLED 203 (325)
T ss_dssp EEECCTTCBHHHHHHTT-TTCSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCSSCEECC-
T ss_pred EeeCCCCCcHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCcceEEECCCCCEEECCCCccccccc
Confidence 99999999999999765 45699999999999999999999999 999999999999999999999999999998754
Q ss_pred CCCc--cccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCccCCCCCccHHHHHHHHHhcCCCcc
Q 045553 955 SETH--ATTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELIS-DKKALDPSFCSFGNGFNIVAWASMLLLQGRPCE 1031 (1082)
Q Consensus 955 ~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1031 (1082)
.... ......+|+.|+|||++.+..++.++||||||+++|||++ |+.||... ...+.........
T Consensus 204 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~--------~~~~~~~~~~~~~---- 271 (325)
T 3kul_A 204 DPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNM--------TNRDVISSVEEGY---- 271 (325)
T ss_dssp ---CCEECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTS--------CHHHHHHHHHTTC----
T ss_pred CccceeeccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCcccC--------CHHHHHHHHHcCC----
Confidence 3322 2233456778999999999999999999999999999999 99998632 2223333322221
Q ss_pred ccccccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhhCC
Q 045553 1032 FFTAGLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQLKQIQP 1079 (1082)
Q Consensus 1032 ~~d~~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L~~i~~ 1079 (1082)
....+...+..+.+++.+||+.||++||++.||++.|+.+..
T Consensus 272 ------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~eil~~L~~l~~ 313 (325)
T 3kul_A 272 ------RLPAPMGCPHALHQLMLDCWHKDRAQRPRFSQIVSVLDALIR 313 (325)
T ss_dssp ------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred ------CCCCCCCcCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 112234456789999999999999999999999999998754
No 58
>3zgw_A Maternal embryonic leucine zipper kinase; transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=2.4e-39 Score=366.67 Aligned_cols=251 Identities=24% Similarity=0.365 Sum_probs=202.5
Q ss_pred HhcCccccceecccCceEEEEEEE-cCCeEEEEEEeecCcc-ccHHHHHHHHHHHhccCCCceeeEeeeeccCCeEEEEE
Q 045553 799 ATAGFNVQNCIGSGGFGATYKAEI-IPGVVVAVKRLSVGRF-QGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFLIY 876 (1082)
Q Consensus 799 ~~~~~~~~~~lg~G~~g~Vy~a~~-~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 876 (1082)
..++|++.+.||+|+||+||+|.. .+|+.||||++..... ...+.+.+|++++++++||||+++++++.+.+..++||
T Consensus 8 l~~~y~i~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lv~ 87 (347)
T 3zgw_A 8 LLKYYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYHVLETANKIFMVL 87 (347)
T ss_dssp TTTTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESSCC---CCHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HhcCeEEEEEEEcCCCeEEEEEEECCCCCEEEEEEEEccccchHHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEEE
Confidence 467899999999999999999975 5789999999976532 33456889999999999999999999999999999999
Q ss_pred eecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCCCC
Q 045553 877 NYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGTSE 956 (1082)
Q Consensus 877 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~ 956 (1082)
||+++|+|.+++... ..+++..+..++.|++.|++|||+. +|+||||||+||++++++.+||+|||++.......
T Consensus 88 E~~~gg~L~~~l~~~--~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~ 162 (347)
T 3zgw_A 88 EYCPGGELFDYIISQ--DRLSEEETRVVFRQIVSAVAYVHSQ---GYAHRDLKPENLLFDEYHKLKLIDFGLCAKPKGNK 162 (347)
T ss_dssp ECCTTCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBC-----
T ss_pred eCCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCccHHHEEEcCCCCEEEEeccCcccccCCC
Confidence 999999999999774 4699999999999999999999999 99999999999999999999999999998765444
Q ss_pred CccccCcccCCCcccchhcccCCC-CchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCCCcccccc
Q 045553 957 THATTDVAGTFGYVAPEYAMTCRV-SDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQGRPCEFFTA 1035 (1082)
Q Consensus 957 ~~~~~~~~gt~~y~aPE~~~~~~~-~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 1035 (1082)
........||+.|+|||++.+..+ +.++||||+||++|||++|+.||+.. ...+......... .
T Consensus 163 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~--------~~~~~~~~i~~~~-~------ 227 (347)
T 3zgw_A 163 DYHLQTCCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFDDD--------NVMALYKKIMRGK-Y------ 227 (347)
T ss_dssp ---------CGGGCCHHHHTTC---CCHHHHHHHHHHHHHHHHSSCSSCCS--------SHHHHHHHHHHTC-C------
T ss_pred CccccccCCccCccCHHHHcCCCCCCcHhHHHHHHHHHHHHHHCCCCCCCC--------CHHHHHHHHHcCC-C------
Confidence 444455689999999999998775 89999999999999999999999732 2333333333221 1
Q ss_pred ccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 045553 1036 GLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQ 1073 (1082)
Q Consensus 1036 ~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~ 1073 (1082)
..+...+..+.+++.+|++.||++|||+.|++++
T Consensus 228 ----~~p~~~s~~~~~li~~~L~~dP~~Rps~~eil~h 261 (347)
T 3zgw_A 228 ----DVPKWLSPSSILLLQQMLQVDPKKRISMKNLLNH 261 (347)
T ss_dssp ----CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHTC
T ss_pred ----CCCCCCCHHHHHHHHHHcccCHhHCcCHHHHhcC
Confidence 1223345678899999999999999999999874
No 59
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*
Probab=100.00 E-value=2.1e-38 Score=356.65 Aligned_cols=262 Identities=23% Similarity=0.303 Sum_probs=219.3
Q ss_pred ccccHHHHHHHhcC----------ccccceecccCceEEEEEEEc-CCeEEEEEEeecCccccHHHHHHHHHHHhccCCC
Q 045553 789 VQLTYENVVRATAG----------FNVQNCIGSGGFGATYKAEII-PGVVVAVKRLSVGRFQGVQQFAAEIRTLGRVQHP 857 (1082)
Q Consensus 789 ~~~~~~~~~~~~~~----------~~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~ 857 (1082)
..++++++..++.. |+..+.||+|+||.||+|... +|+.||||++........+.+.+|+.++++++||
T Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~ 102 (321)
T 2c30_A 23 GVVTHEQFKAALRMVVDQGDPRLLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHF 102 (321)
T ss_dssp --CCHHHHHHHHHTTSCSSCHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCSHHHHHHHHHHHTTCCCT
T ss_pred CcCcHHHHHHHHhhccCCCCchhhhhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccchhHHHHHHHHHHHHHhCCCC
Confidence 35778888887764 777889999999999999776 6999999999877666778899999999999999
Q ss_pred ceeeEeeeeccCCeEEEEEeecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcC
Q 045553 858 NLVTLIGYHVSEAEMFLIYNYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDN 937 (1082)
Q Consensus 858 niv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~ 937 (1082)
||+++++++...+..++||||+++++|.+++.. ..+++..+..++.|++.||+|||+. +|+||||||+||+++.
T Consensus 103 niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~---~~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~ 176 (321)
T 2c30_A 103 NVVEMYKSYLVGEELWVLMEFLQGGALTDIVSQ---VRLNEEQIATVCEAVLQALAYLHAQ---GVIHRDIKSDSILLTL 176 (321)
T ss_dssp TBCCEEEEEEETTEEEEEECCCCSCBHHHHHTT---CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECT
T ss_pred CcceEEEEEEECCEEEEEEecCCCCCHHHHHHh---cCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECC
Confidence 999999999999999999999999999999875 3689999999999999999999999 9999999999999999
Q ss_pred CCcEEEeecccceecCCCCCccccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHH
Q 045553 938 NLNAYLSDFGLARLLGTSETHATTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIV 1017 (1082)
Q Consensus 938 ~~~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~ 1017 (1082)
++.+||+|||++........ ......||+.|+|||++.+..++.++||||||+++|||++|+.||... ...
T Consensus 177 ~~~~kl~Dfg~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~--------~~~ 247 (321)
T 2c30_A 177 DGRVKLSDFGFCAQISKDVP-KRKSLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSD--------SPV 247 (321)
T ss_dssp TCCEEECCCTTCEECCSSSC-CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTS--------CHH
T ss_pred CCcEEEeeeeeeeecccCcc-ccccccCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCC--------CHH
Confidence 99999999999987654332 234567999999999999999999999999999999999999999632 222
Q ss_pred HHHHHHHhcCCCccccccccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 045553 1018 AWASMLLLQGRPCEFFTAGLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQ 1073 (1082)
Q Consensus 1018 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~ 1073 (1082)
+......... .... ..+...+..+.+++.+|++.||++||++.|++++
T Consensus 248 ~~~~~~~~~~-~~~~-------~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h 295 (321)
T 2c30_A 248 QAMKRLRDSP-PPKL-------KNSHKVSPVLRDFLERMLVRDPQERATAQELLDH 295 (321)
T ss_dssp HHHHHHHHSS-CCCC-------TTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred HHHHHHhcCC-CCCc-------CccccCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 2222222221 1111 1122345678999999999999999999999874
No 60
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=100.00 E-value=2e-38 Score=373.00 Aligned_cols=400 Identities=23% Similarity=0.292 Sum_probs=270.8
Q ss_pred CCCCCccccccccccCCCCCCEEEcccCCCcccCChhhcCCCCC-------------CEEeCcCCCCCCCCCccccCCCC
Q 045553 93 NSSDKLSGNLSRAIGDLTQLRVLLLAFNGFSGELPLEIGQLSLL-------------EILDLSFNSFHGPIPPTLQNCSS 159 (1082)
Q Consensus 93 ~~~~~l~g~l~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L-------------~~L~Ls~n~l~~~~p~~l~~l~~ 159 (1082)
.+.+++ |.+|++|+++++|++|++++|.++|.+|..++.+++| ++|++++|.+++ +|.. .++
T Consensus 18 l~~n~l-~~iP~~i~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~c~~~~l~~L~l~~~~l~~-lp~~---~~~ 92 (454)
T 1jl5_A 18 RHSSNL-TEMPVEAENVKSKTEYYNAWSEWERNAPPGNGEQREMAVSRLRDCLDRQAHELELNNLGLSS-LPEL---PPH 92 (454)
T ss_dssp -----------------CCHHHHHHHHHHHHHTSCTTSCCCHHHHHHHHHHHHHHTCSEEECTTSCCSC-CCSC---CTT
T ss_pred cccCch-hhCChhHhcccchhhhhccCCcccccCCcccccchhcchhhhhhhhccCCCEEEecCCcccc-CCCC---cCC
Confidence 455778 8999999999999999999999999999999999875 999999999994 5652 479
Q ss_pred CCeEEccCcccccccCccccCCCCCcEEEcccCcccccCCcccccccccccEEEcccCccCCCCCccccCCCCccEEEcc
Q 045553 160 LRLINLSGNQFNGTIPAFFGQSPGFQVVSLSFNLLSGSVPEEFGDNCVSLEHILLAANSLTGSIPPSLGNCTELRSLLLS 239 (1082)
Q Consensus 160 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~ 239 (1082)
|++|++++|++++ +|.. +++|++|++++|+++ .+|.. .++|++|++++|++++ +| .++++++|++|+++
T Consensus 93 L~~L~l~~n~l~~-lp~~---~~~L~~L~l~~n~l~-~l~~~----~~~L~~L~L~~n~l~~-lp-~~~~l~~L~~L~l~ 161 (454)
T 1jl5_A 93 LESLVASCNSLTE-LPEL---PQSLKSLLVDNNNLK-ALSDL----PPLLEYLGVSNNQLEK-LP-ELQNSSFLKIIDVD 161 (454)
T ss_dssp CSEEECCSSCCSS-CCCC---CTTCCEEECCSSCCS-CCCSC----CTTCCEEECCSSCCSS-CC-CCTTCTTCCEEECC
T ss_pred CCEEEccCCcCCc-cccc---cCCCcEEECCCCccC-cccCC----CCCCCEEECcCCCCCC-Cc-ccCCCCCCCEEECC
Confidence 9999999999997 6654 489999999999998 45432 2689999999999996 77 69999999999999
Q ss_pred CCcCCCCcCccccCCCCCCEEeCCCCcCcccCCccccCCCCCcEEEeccccCCcccccCCCCCCcccccCCCcccccCCC
Q 045553 240 SNMLQGDIPSSFGQLVNLEVLDLSRNFLSGIVPSELGMCKQLKVLVLRNDYGPLYSREHGDLPIQPVVDGGEDYNFFDGG 319 (1082)
Q Consensus 240 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~n~~~~~~~~~~~l~~~~~~~~~~~~n~~~~~ 319 (1082)
+|++++ +|..+ .+|++|++++|++++ +| .++.+++|++|++++|.+..
T Consensus 162 ~N~l~~-lp~~~---~~L~~L~L~~n~l~~-l~-~~~~l~~L~~L~l~~N~l~~-------------------------- 209 (454)
T 1jl5_A 162 NNSLKK-LPDLP---PSLEFIAAGNNQLEE-LP-ELQNLPFLTAIYADNNSLKK-------------------------- 209 (454)
T ss_dssp SSCCSC-CCCCC---TTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSS--------------------------
T ss_pred CCcCcc-cCCCc---ccccEEECcCCcCCc-Cc-cccCCCCCCEEECCCCcCCc--------------------------
Confidence 999995 66543 599999999999996 56 69999999999999865432
Q ss_pred CCccccCCCCCcEEEcCCCcccCCCCcccccccCCCeEEcCCccccCCCCccccCCCCCCEEecCCCcCcccCCCCcccC
Q 045553 320 LPDSITRLPNLRVFWAPNLNLEGIFPQNWELCSKLEMLNLAHNFFTGQIPASLGNCKSLYFLDLSSNNLTGLLPEEVSVP 399 (1082)
Q Consensus 320 ~p~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~l~ 399 (1082)
+|.. .++|++|++++|.+.. +| .+..+++|++|++++|++++ +|.. +++|+.|++++|++++. |.. .+
T Consensus 210 l~~~---~~~L~~L~l~~n~l~~-lp-~~~~l~~L~~L~l~~N~l~~-l~~~---~~~L~~L~l~~N~l~~l-~~~--~~ 277 (454)
T 1jl5_A 210 LPDL---PLSLESIVAGNNILEE-LP-ELQNLPFLTTIYADNNLLKT-LPDL---PPSLEALNVRDNYLTDL-PEL--PQ 277 (454)
T ss_dssp CCCC---CTTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSS-CCSC---CTTCCEEECCSSCCSCC-CCC--CT
T ss_pred CCCC---cCcccEEECcCCcCCc-cc-ccCCCCCCCEEECCCCcCCc-cccc---ccccCEEECCCCccccc-Ccc--cC
Confidence 2322 2489999999999995 45 48999999999999999994 5653 48899999999999974 433 37
Q ss_pred cccEEEecCCcceecCCCCCCcccccccccccccceeeeeecccccccccccCcCCCCCCCCCceeEeeccCCcccCCCC
Q 045553 400 CMAVFNVSQNLLSGEIPRISHSECSKMSVNWSMSQVDLIGFYTAFFYENALTSCAPFSSPSNGLFILHDFSNNLFTGPVP 479 (1082)
Q Consensus 400 ~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~n~~~g~~p 479 (1082)
+|+.|++++|.+++. |. +|
T Consensus 278 ~L~~L~ls~N~l~~l-~~------------------------------------------------------------~~ 296 (454)
T 1jl5_A 278 SLTFLDVSENIFSGL-SE------------------------------------------------------------LP 296 (454)
T ss_dssp TCCEEECCSSCCSEE-SC------------------------------------------------------------CC
T ss_pred cCCEEECcCCccCcc-cC------------------------------------------------------------cC
Confidence 899999999988641 10 01
Q ss_pred CccccCCCccccccceeeeccCCCccccCCcccccccCCceeEEEccCCcccccCCccccccCCcccEEEccCCcccccC
Q 045553 480 PFLIDSDSLSSRPYYGFWLSGNSLKGNLSTYPFDLCLSLDGLIFDIGNNKLIGEVPSDMGSHCKCMKFLSMAGNEFVGLI 559 (1082)
Q Consensus 480 ~~~~~~~~l~~~~~~~~~~~~n~~~~~l~~~p~~~~~~~~l~~l~l~~n~l~~~ip~~~~~~~~~L~~L~L~~N~i~~~~ 559 (1082)
.+++.|++++|++.+ ++. ..++|++|++++|+++++
T Consensus 297 --------------------------------------~~L~~L~l~~N~l~~-i~~----~~~~L~~L~Ls~N~l~~l- 332 (454)
T 1jl5_A 297 --------------------------------------PNLYYLNASSNEIRS-LCD----LPPSLEELNVSNNKLIEL- 332 (454)
T ss_dssp --------------------------------------TTCCEEECCSSCCSE-ECC----CCTTCCEEECCSSCCSCC-
T ss_pred --------------------------------------CcCCEEECcCCcCCc-ccC----CcCcCCEEECCCCccccc-
Confidence 123577777777763 332 224689999999999874
Q ss_pred ccccCCCCCCCEEEccCCCCCCCCcccccCCCCCCEEEcCCCcCCc--cCchhhhcCcccchhhccCcccCCCCCccccC
Q 045553 560 PQSFTNFDSLRNLNLSRNHLQGPLPSYINKMEDLKFLSLSLNNFTG--AIPWELTQLASLEVLELSANSLSGEIPSEFSK 637 (1082)
Q Consensus 560 ~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~--~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~ 637 (1082)
|.. +++|++|+|++|++++ +|. .+++|++|++++|++++ .+|..+.. |+.|.+.+.+|..
T Consensus 333 p~~---~~~L~~L~L~~N~l~~-lp~---~l~~L~~L~L~~N~l~~l~~ip~~l~~--------L~~n~~~~~i~~~--- 394 (454)
T 1jl5_A 333 PAL---PPRLERLIASFNHLAE-VPE---LPQNLKQLHVEYNPLREFPDIPESVED--------LRMNSHLAEVPEL--- 394 (454)
T ss_dssp CCC---CTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSSCCCCCTTCCE--------EECCC-----------
T ss_pred ccc---CCcCCEEECCCCcccc-ccc---hhhhccEEECCCCCCCcCCCChHHHHh--------hhhcccccccccc---
Confidence 443 5789999999999984 565 47899999999999997 67766543 3457777777763
Q ss_pred CcccceecccCcccCC--CCCCCCCCCCcccEEeccCCccccCCCC
Q 045553 638 LEHLNVLRLDHNNLTG--RIPPGFGTRSSLSIFDVSFNNLSGSAPR 681 (1082)
Q Consensus 638 l~~L~~L~L~~N~l~~--~~p~~~~~l~~L~~l~ls~N~l~~~~p~ 681 (1082)
+++|+.|+|++|++++ .+|. +++.|.+.+|.+.+.+|.
T Consensus 395 ~~~L~~L~ls~N~l~~~~~iP~------sl~~L~~~~~~~~~~~~~ 434 (454)
T 1jl5_A 395 PQNLKQLHVETNPLREFPDIPE------SVEDLRMNSERVVDPYEF 434 (454)
T ss_dssp ----------------------------------------------
T ss_pred cCcCCEEECCCCcCCccccchh------hHhheeCcCcccCCcccc
Confidence 5789999999999997 5554 466777889998877664
No 61
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Probab=100.00 E-value=6.7e-39 Score=360.99 Aligned_cols=248 Identities=24% Similarity=0.380 Sum_probs=210.8
Q ss_pred hcCccccceecccCceEEEEEEE-cCCeEEEEEEeecCc--cccHHHHHHHHHHHhccCCCceeeEeeeeccCCeEEEEE
Q 045553 800 TAGFNVQNCIGSGGFGATYKAEI-IPGVVVAVKRLSVGR--FQGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFLIY 876 (1082)
Q Consensus 800 ~~~~~~~~~lg~G~~g~Vy~a~~-~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 876 (1082)
.++|++.+.||+|+||.||+|.. .+|+.||||++.... ....+.+.+|+++++.++||||+++++++.+.+..++||
T Consensus 14 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~ 93 (328)
T 3fe3_A 14 IGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIM 93 (328)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cCCEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEE
Confidence 46799999999999999999976 579999999997543 344567889999999999999999999999999999999
Q ss_pred eecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCCCC
Q 045553 877 NYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGTSE 956 (1082)
Q Consensus 877 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~ 956 (1082)
||+++|+|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++......
T Consensus 94 e~~~~~~L~~~l~~~--~~l~~~~~~~~~~qi~~al~~lH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~ 168 (328)
T 3fe3_A 94 EYASGGEVFDYLVAH--GRMKEKEARSKFRQIVSAVQYCHQK---RIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGG 168 (328)
T ss_dssp CCCTTCBHHHHHHHH--CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECSTTCCGGGSSSC
T ss_pred ECCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC---CEeccCCCHHHEEEcCCCCEEEeeccCceecCCCC
Confidence 999999999999774 4689999999999999999999999 99999999999999999999999999998764332
Q ss_pred CccccCcccCCCcccchhcccCCCC-chhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCCCcccccc
Q 045553 957 THATTDVAGTFGYVAPEYAMTCRVS-DKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQGRPCEFFTA 1035 (1082)
Q Consensus 957 ~~~~~~~~gt~~y~aPE~~~~~~~~-~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 1035 (1082)
......||+.|+|||++.+..++ .++||||+||++|||++|+.||+.. +..+......... .
T Consensus 169 --~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~--------~~~~~~~~i~~~~-~------ 231 (328)
T 3fe3_A 169 --KLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQ--------NLKELRERVLRGK-Y------ 231 (328)
T ss_dssp --GGGTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCS--------SHHHHHHHHHHCC-C------
T ss_pred --ccccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCC--------CHHHHHHHHHhCC-C------
Confidence 33456799999999999988765 7999999999999999999999732 3334433333322 1
Q ss_pred ccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 045553 1036 GLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQ 1073 (1082)
Q Consensus 1036 ~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~ 1073 (1082)
..|...+.++.+++.+|++.||++|||+.|++++
T Consensus 232 ----~~p~~~s~~~~~li~~~L~~dP~~R~t~~eil~h 265 (328)
T 3fe3_A 232 ----RIPFYMSTDCENLLKRFLVLNPIKRGTLEQIMKD 265 (328)
T ss_dssp ----CCCTTSCHHHHHHHHHHCCSSTTTSCCHHHHTTC
T ss_pred ----CCCCCCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 1223345678999999999999999999999864
No 62
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A
Probab=100.00 E-value=5.7e-39 Score=354.98 Aligned_cols=259 Identities=23% Similarity=0.378 Sum_probs=215.0
Q ss_pred hcCccccceecccCceEEEEEEEcCCeEEEEEEeecCccccHHHHHHHHHHHhccCCCceeeEeeeeccCCeEEEEEeec
Q 045553 800 TAGFNVQNCIGSGGFGATYKAEIIPGVVVAVKRLSVGRFQGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFLIYNYL 879 (1082)
Q Consensus 800 ~~~~~~~~~lg~G~~g~Vy~a~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~~ 879 (1082)
.++|++.+.||+|+||.||+|+..++..||||++..... ..+++.+|++++++++||||+++++++.+....++||||+
T Consensus 23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 101 (283)
T 3gen_A 23 PKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSM-SEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYM 101 (283)
T ss_dssp GGGEEEEEECC---CEEEEEEEETTTEEEEEEEECTTSB-CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEECCC
T ss_pred HHHHHhHhhcCCCCCceEEEEEEcCCCeEEEEEecCCCC-CHHHHHHHHHHHhcCCCCCEeeEEEEEecCCCeEEEEecc
Confidence 457899999999999999999999899999999976543 3577899999999999999999999999999999999999
Q ss_pred CCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCCCCCcc
Q 045553 880 PGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGTSETHA 959 (1082)
Q Consensus 880 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~ 959 (1082)
++++|.+++... ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||.++.........
T Consensus 102 ~~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~ 177 (283)
T 3gen_A 102 ANGCLLNYLREM-RHRFQTQQLLEMCKDVCEAMEYLESK---QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTS 177 (283)
T ss_dssp TTCBHHHHHHCG-GGCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCSGGGEEECTTSCEEECSTTGGGGBCCHHHHS
T ss_pred CCCcHHHHHHHh-ccCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCccceEEEcCCCCEEEcccccccccccccccc
Confidence 999999999864 34699999999999999999999999 99999999999999999999999999998765443333
Q ss_pred ccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCccCCCCCccHHHHHHHHHhcCCCccccccccC
Q 045553 960 TTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELIS-DKKALDPSFCSFGNGFNIVAWASMLLLQGRPCEFFTAGLW 1038 (1082)
Q Consensus 960 ~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 1038 (1082)
.....+++.|+|||++.+..++.++||||+|+++|||++ |+.||... ............. .
T Consensus 178 ~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~--------~~~~~~~~~~~~~----------~ 239 (283)
T 3gen_A 178 SVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERF--------TNSETAEHIAQGL----------R 239 (283)
T ss_dssp TTSTTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTS--------CHHHHHHHHHTTC----------C
T ss_pred ccCCccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCcccc--------ChhHHHHHHhccc----------C
Confidence 444567888999999999999999999999999999998 99998632 2222222222211 1
Q ss_pred CCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhhCCCC
Q 045553 1039 DCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQLKQIQPPA 1081 (1082)
Q Consensus 1039 ~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L~~i~~~~ 1081 (1082)
...+...+..+.+++.+|++.+|++||++.|++++|+++.+..
T Consensus 240 ~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~~~~~e 282 (283)
T 3gen_A 240 LYRPHLASEKVYTIMYSCWHEKADERPTFKILLSNILDVMDEE 282 (283)
T ss_dssp CCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHHC
T ss_pred CCCCCcCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHhhcc
Confidence 1122334568999999999999999999999999999886543
No 63
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...
Probab=100.00 E-value=4.4e-39 Score=358.15 Aligned_cols=268 Identities=28% Similarity=0.409 Sum_probs=212.4
Q ss_pred hcCccccceecccCceEEEEEEE-----cCCeEEEEEEeecCccccHHHHHHHHHHHhccCCCceeeEeeeeccC--CeE
Q 045553 800 TAGFNVQNCIGSGGFGATYKAEI-----IPGVVVAVKRLSVGRFQGVQQFAAEIRTLGRVQHPNLVTLIGYHVSE--AEM 872 (1082)
Q Consensus 800 ~~~~~~~~~lg~G~~g~Vy~a~~-----~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~--~~~ 872 (1082)
..+|++.+.||+|+||+||+|++ .+++.||||++........+.+.+|++++++++||||+++++++... ...
T Consensus 9 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 88 (295)
T 3ugc_A 9 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNL 88 (295)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHHHTSC
T ss_pred HHHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCce
Confidence 35799999999999999999975 35899999999877666678899999999999999999999988653 568
Q ss_pred EEEEeecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceec
Q 045553 873 FLIYNYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLL 952 (1082)
Q Consensus 873 ~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~ 952 (1082)
++||||+++|+|.+++... ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++..
T Consensus 89 ~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~kl~Dfg~~~~~ 164 (295)
T 3ugc_A 89 KLIMEYLPYGSLRDYLQKH-KERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVL 164 (295)
T ss_dssp EEEEECCTTCBHHHHHHHC-GGGCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCCCSCC--
T ss_pred EEEEEeCCCCCHHHHHHhc-ccccCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCHhhEEEcCCCeEEEccCcccccc
Confidence 9999999999999999875 34589999999999999999999999 9999999999999999999999999999876
Q ss_pred CCCCC--ccccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHhCCCCCCCCccC-------CCCCccHHHHHHHH
Q 045553 953 GTSET--HATTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELISDKKALDPSFCS-------FGNGFNIVAWASML 1023 (1082)
Q Consensus 953 ~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~elltg~~p~~~~~~~-------~~~~~~~~~~~~~~ 1023 (1082)
..... .......++..|+|||++.+..++.++||||||+++|||++|..|+...... ..............
T Consensus 165 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (295)
T 3ugc_A 165 PQDKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIEL 244 (295)
T ss_dssp -----------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTCTTCSHHHHHHHHHCTTCCTHHHHHHHHHH
T ss_pred cCCcceeeeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhcccccCCChHHHHhhhcCccccchhHHHHHHH
Confidence 54332 1223345778899999999999999999999999999999999998642110 00011111111122
Q ss_pred HhcCCCccccccccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhhCCC
Q 045553 1024 LLQGRPCEFFTAGLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQLKQIQPP 1080 (1082)
Q Consensus 1024 ~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L~~i~~~ 1080 (1082)
...+ .....+...+.++.+++.+||+.+|++|||+.|+++.|+++++.
T Consensus 245 ~~~~---------~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~el~~~L~~l~~~ 292 (295)
T 3ugc_A 245 LKNN---------GRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDN 292 (295)
T ss_dssp HHTT---------CCCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred Hhcc---------CcCCCCcCcCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHHh
Confidence 2221 11123445567899999999999999999999999999988653
No 64
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*
Probab=100.00 E-value=8.6e-39 Score=360.30 Aligned_cols=271 Identities=28% Similarity=0.428 Sum_probs=212.7
Q ss_pred hcCccccceecccCceEEEEEEEcCCeEEEEEEeecCccccHHHHHHHHHHHhccCCCceeeEeeeeccCC----eEEEE
Q 045553 800 TAGFNVQNCIGSGGFGATYKAEIIPGVVVAVKRLSVGRFQGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEA----EMFLI 875 (1082)
Q Consensus 800 ~~~~~~~~~lg~G~~g~Vy~a~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~----~~~lV 875 (1082)
..+|++.++||+|+||+||+|+.. ++.||||++.... .....+.+|+.++++++||||+++++++.... ..++|
T Consensus 23 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~lv 100 (322)
T 3soc_A 23 SMPLQLLEVKARGRFGCVWKAQLL-NEYVAVKIFPIQD-KQSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWLI 100 (322)
T ss_dssp TEEEEEEEEEECSTTCEEEEEEET-TEEEEEEEECGGG-HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEE
T ss_pred hhhchhhheecccCceEEEEEEEC-CCEEEEEEeecCc-hHHHHHHHHHHHHhcCCCCCchhhcceeccCCCCCceEEEE
Confidence 457999999999999999999876 8999999997543 23445667999999999999999999988643 47999
Q ss_pred EeecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCC-------CCCeEeccCCCCCEEEcCCCcEEEeeccc
Q 045553 876 YNYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDEC-------VPRVLHRDIKPSNILLDNNLNAYLSDFGL 948 (1082)
Q Consensus 876 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~-------~~~ivH~Dlk~~Nill~~~~~~kl~DfGl 948 (1082)
|||+++|+|.++++.. .+++..+..++.|++.||+|||+.+ .++|+||||||+||+++.++.+||+|||+
T Consensus 101 ~e~~~~g~L~~~l~~~---~~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~ivH~Dlkp~Nill~~~~~~kL~DFg~ 177 (322)
T 3soc_A 101 TAFHEKGSLSDFLKAN---VVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGL 177 (322)
T ss_dssp EECCTTCBHHHHHHHC---CBCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECEEECSCCSGGGEEECTTCCEEECCCTT
T ss_pred EecCCCCCHHHHHHhc---CCCHHHHHHHHHHHHHHHHHHHhhccccccccCCCEEeCCCChHhEEECCCCeEEEccCCc
Confidence 9999999999999864 4999999999999999999999862 34899999999999999999999999999
Q ss_pred ceecCCCCCc-cccCcccCCCcccchhcccC-----CCCchhhHHHHHHHHHHHHhCCCCCCCCccCCC--------CCc
Q 045553 949 ARLLGTSETH-ATTDVAGTFGYVAPEYAMTC-----RVSDKADVYSFGVVLLELISDKKALDPSFCSFG--------NGF 1014 (1082)
Q Consensus 949 a~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~-----~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~--------~~~ 1014 (1082)
++.+...... ......||+.|+|||++.+. .++.++|||||||++|||++|+.||........ ...
T Consensus 178 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~ 257 (322)
T 3soc_A 178 ALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEEEIGQHP 257 (322)
T ss_dssp CEEECTTSCCCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCCCCCCCTTHHHHCSSC
T ss_pred ccccccccCccccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCcchhccchhhhhccCC
Confidence 9877544332 23346799999999999863 456789999999999999999999975432211 111
Q ss_pred cHHHHHHHHHhcCCCccccccccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhhCC
Q 045553 1015 NIVAWASMLLLQGRPCEFFTAGLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQLKQIQP 1079 (1082)
Q Consensus 1015 ~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L~~i~~ 1079 (1082)
....+........... .+.... .+...+.++.+++.+||+.||++|||+.||++.|++++.
T Consensus 258 ~~~~~~~~~~~~~~~~-~~~~~~---~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~~ 318 (322)
T 3soc_A 258 SLEDMQEVVVHKKKRP-VLRDYW---QKHAGMAMLCETIEECWDHDAEARLSAGCVGERITQMQR 318 (322)
T ss_dssp CHHHHHHHHTTSCCCC-CCCGGG---GSSHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred chhhhhhhhhcccCCC-Cccccc---cccchHHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHH
Confidence 2223322222221111 111110 123456779999999999999999999999999998864
No 65
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Probab=100.00 E-value=2.4e-38 Score=353.33 Aligned_cols=262 Identities=23% Similarity=0.371 Sum_probs=206.3
Q ss_pred hcCccccceecccCceEEEEEEEcCCeEEEEEEeecCccccHHHHHHHHHHHhc--cCCCceeeEeeeecc----CCeEE
Q 045553 800 TAGFNVQNCIGSGGFGATYKAEIIPGVVVAVKRLSVGRFQGVQQFAAEIRTLGR--VQHPNLVTLIGYHVS----EAEMF 873 (1082)
Q Consensus 800 ~~~~~~~~~lg~G~~g~Vy~a~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~--l~h~niv~l~~~~~~----~~~~~ 873 (1082)
.++|++.+.||+|+||+||+|+. +++.||||++... ....+.+|.+++.. ++||||+++++++.. ....+
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~---~~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~~ 82 (301)
T 3q4u_A 7 ARDITLLECVGKGRYGEVWRGSW-QGENVAVKIFSSR---DEKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQLW 82 (301)
T ss_dssp GGGCEEEEEEEECSSEEEEEEEE-TTEEEEEEEECGG---GHHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEEEEE
T ss_pred cCcEEEEEeeccCCCcEEEEEEE-CCEEEEEEEeccc---cchhhHHHHHHHHHhhccCcCeeeEEEeeccccCCCceeE
Confidence 46799999999999999999987 5999999998643 34555666666665 799999999998654 35689
Q ss_pred EEEeecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHh--------hCCCCCeEeccCCCCCEEEcCCCcEEEee
Q 045553 874 LIYNYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLH--------DECVPRVLHRDIKPSNILLDNNLNAYLSD 945 (1082)
Q Consensus 874 lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH--------~~~~~~ivH~Dlk~~Nill~~~~~~kl~D 945 (1082)
+||||+++|+|.++++. ..+++..+.+++.|++.||+||| +. +|+||||||+||+++.++.+||+|
T Consensus 83 lv~e~~~~g~L~~~l~~---~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~---~ivH~Dlkp~Nill~~~~~~kl~D 156 (301)
T 3q4u_A 83 LITHYHEMGSLYDYLQL---TTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKP---AIAHRDLKSKNILVKKNGQCCIAD 156 (301)
T ss_dssp EEECCCTTCBHHHHHTT---CCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBC---EEECSCCCGGGEEECTTSCEEECC
T ss_pred EehhhccCCCHHHHHhh---cccCHHHHHHHHHHHHHHHHHHHHhhhhccCCC---CeecCCCChHhEEEcCCCCEEEee
Confidence 99999999999999964 46999999999999999999999 77 999999999999999999999999
Q ss_pred cccceecCCCCCcc---ccCcccCCCcccchhcccC------CCCchhhHHHHHHHHHHHHhC----------CCCCCCC
Q 045553 946 FGLARLLGTSETHA---TTDVAGTFGYVAPEYAMTC------RVSDKADVYSFGVVLLELISD----------KKALDPS 1006 (1082)
Q Consensus 946 fGla~~~~~~~~~~---~~~~~gt~~y~aPE~~~~~------~~~~~~Dv~slGvll~elltg----------~~p~~~~ 1006 (1082)
||+++......... .....||+.|+|||++.+. .++.++||||||+++|||++| +.||...
T Consensus 157 fg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~~~pf~~~ 236 (301)
T 3q4u_A 157 LGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDV 236 (301)
T ss_dssp CTTCEEEETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTT
T ss_pred CCCeeecccccccccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCcccccccccccccc
Confidence 99998765433321 2345799999999999876 455799999999999999999 7777643
Q ss_pred ccCCCCCccHHHHHHHHHhcCCCccccccccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhhC
Q 045553 1007 FCSFGNGFNIVAWASMLLLQGRPCEFFTAGLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQLKQIQ 1078 (1082)
Q Consensus 1007 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L~~i~ 1078 (1082)
... ....................... ..+...+..+.+++.+||+.||++|||+.||++.|+++.
T Consensus 237 ~~~---~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i~ 301 (301)
T 3q4u_A 237 VPN---DPSFEDMRKVVCVDQQRPNIPNR----WFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTKID 301 (301)
T ss_dssp SCS---SCCHHHHHHHHTTSCCCCCCCGG----GGGSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHHC
T ss_pred CCC---CcchhhhhHHHhccCCCCCCChh----hccCccHHHHHHHHHHHhhcChhhCCCHHHHHHHHhccC
Confidence 322 22222322222222211111100 112356788999999999999999999999999999874
No 66
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Probab=100.00 E-value=5.4e-39 Score=382.81 Aligned_cols=259 Identities=25% Similarity=0.402 Sum_probs=219.3
Q ss_pred hcCccccceecccCceEEEEEEEcC-CeEEEEEEeecCccccHHHHHHHHHHHhccCCCceeeEeeeeccCCeEEEEEee
Q 045553 800 TAGFNVQNCIGSGGFGATYKAEIIP-GVVVAVKRLSVGRFQGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFLIYNY 878 (1082)
Q Consensus 800 ~~~~~~~~~lg~G~~g~Vy~a~~~~-~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~ 878 (1082)
..+|++.+.||+|+||.||+|.+.. +..||||+++... ...++|.+|++++++++||||+++++++......++||||
T Consensus 219 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~E~ 297 (495)
T 1opk_A 219 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEF 297 (495)
T ss_dssp GGGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEEC
T ss_pred HHHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCcc-cchHHHHHHHHHHHhcCCCCEeeEEEEEecCCcEEEEEEc
Confidence 3568889999999999999998765 8999999997653 3467899999999999999999999999999999999999
Q ss_pred cCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCCCCCc
Q 045553 879 LPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGTSETH 958 (1082)
Q Consensus 879 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~ 958 (1082)
+++|+|.++++......+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++........
T Consensus 298 ~~~g~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~ 374 (495)
T 1opk_A 298 MTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK---NFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYT 374 (495)
T ss_dssp CTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECGGGCEEECCTTCEECCTTCCEE
T ss_pred cCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChhhEEECCCCcEEEeecccceeccCCcee
Confidence 9999999999987667799999999999999999999999 9999999999999999999999999999977544333
Q ss_pred cccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCccCCCCCccHHHHHHHHHhcCCCcccccccc
Q 045553 959 ATTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELIS-DKKALDPSFCSFGNGFNIVAWASMLLLQGRPCEFFTAGL 1037 (1082)
Q Consensus 959 ~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 1037 (1082)
......++..|+|||++.+..++.++|||||||++|||++ |+.||.... .....+ .+..+ .
T Consensus 375 ~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~-----~~~~~~----~~~~~---------~ 436 (495)
T 1opk_A 375 AHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGID-----LSQVYE----LLEKD---------Y 436 (495)
T ss_dssp CCTTCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCC-----GGGHHH----HHHTT---------C
T ss_pred ecCCCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCCC-----HHHHHH----HHHcC---------C
Confidence 3344557789999999999999999999999999999999 889986432 112221 12221 1
Q ss_pred CCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhhCCC
Q 045553 1038 WDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQLKQIQPP 1080 (1082)
Q Consensus 1038 ~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L~~i~~~ 1080 (1082)
+...+...+..+.+++.+||+.+|++||++.||++.|+.+...
T Consensus 437 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~el~~~L~~~~~~ 479 (495)
T 1opk_A 437 RMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQE 479 (495)
T ss_dssp CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSCSS
T ss_pred CCCCCCCCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHHhc
Confidence 1123445567899999999999999999999999999987543
No 67
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}
Probab=100.00 E-value=8.9e-39 Score=355.24 Aligned_cols=262 Identities=24% Similarity=0.418 Sum_probs=211.0
Q ss_pred hcCccccceecccCceEEEEEEEc-CCeEEEEEEeecCcc---ccHHHHHHHHHHHhccCCCceeeEeeeeccCCeEEEE
Q 045553 800 TAGFNVQNCIGSGGFGATYKAEII-PGVVVAVKRLSVGRF---QGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFLI 875 (1082)
Q Consensus 800 ~~~~~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV 875 (1082)
.++|++.+.||+|+||.||+|+.. +++.||+|++..... ...+.+.+|+.++++++||||+++++++.+.+..++|
T Consensus 10 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv 89 (294)
T 4eqm_A 10 NERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLV 89 (294)
T ss_dssp ETTEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSSEEEEE
T ss_pred hccEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCCeEEEE
Confidence 467999999999999999999754 689999999865432 3356789999999999999999999999999999999
Q ss_pred EeecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCCC
Q 045553 876 YNYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGTS 955 (1082)
Q Consensus 876 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~ 955 (1082)
|||+++++|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.....
T Consensus 90 ~e~~~g~~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 164 (294)
T 4eqm_A 90 MEYIEGPTLSEYIESH--GPLSVDTAINFTNQILDGIKHAHDM---RIVHRDIKPQNILIDSNKTLKIFDFGIAKALSET 164 (294)
T ss_dssp EECCCSCBHHHHHHHH--CSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCSSSTTC---
T ss_pred EeCCCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEEeCCCccccccc
Confidence 9999999999999874 4689999999999999999999999 9999999999999999999999999999876544
Q ss_pred CCccccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCCCcccccc
Q 045553 956 ETHATTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQGRPCEFFTA 1035 (1082)
Q Consensus 956 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 1035 (1082)
.........||+.|+|||.+.+..++.++||||+|+++|||++|+.||... .............. ... ..
T Consensus 165 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~--------~~~~~~~~~~~~~~-~~~-~~ 234 (294)
T 4eqm_A 165 SLTQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGE--------TAVSIAIKHIQDSV-PNV-TT 234 (294)
T ss_dssp ----------CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCSS--------CHHHHHHHHHSSCC-CCH-HH
T ss_pred cccccCccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCC--------ChHHHHHHHhhccC-CCc-ch
Confidence 444444567999999999999999999999999999999999999999742 22232233332221 111 11
Q ss_pred ccCCCCChHHHHHHHHHHHHcccCCCCCCC-CHHHHHHHHhhhCCC
Q 045553 1036 GLWDCGPHDDLIEMLNLAIMCTGESLSSRP-SMRQVAQQLKQIQPP 1080 (1082)
Q Consensus 1036 ~l~~~~~~~~~~~l~~li~~cl~~~p~~RP-t~~ev~~~L~~i~~~ 1080 (1082)
. .+...+..+.+++.+|++.||++|| ++.++.+.|+.+...
T Consensus 235 ~----~~~~~~~~l~~li~~~l~~dp~~R~~~~~~l~~~l~~~~~~ 276 (294)
T 4eqm_A 235 D----VRKDIPQSLSNVILRATEKDKANRYKTIQEMKDDLSSVLHE 276 (294)
T ss_dssp H----SCTTSCHHHHHHHHHHSCSSGGGSCSSHHHHHHHHHTSSSS
T ss_pred h----cccCCCHHHHHHHHHHhcCCHhHccccHHHHHHHHHHHHhh
Confidence 1 1223456899999999999999998 999999999987543
No 68
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Probab=100.00 E-value=2.7e-39 Score=371.38 Aligned_cols=256 Identities=25% Similarity=0.434 Sum_probs=201.6
Q ss_pred cCccccceecccCceEEEEEEEc----CCeEEEEEEeecCc-cccHHHHHHHHHHHhccCCCceeeEeeeeccCCeEEEE
Q 045553 801 AGFNVQNCIGSGGFGATYKAEII----PGVVVAVKRLSVGR-FQGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFLI 875 (1082)
Q Consensus 801 ~~~~~~~~lg~G~~g~Vy~a~~~----~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV 875 (1082)
.+|++.+.||+|+||.||+|+.. ++..||||+++... ....+.|.+|++++++++||||+++++++.+....++|
T Consensus 45 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 124 (373)
T 2qol_A 45 TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIV 124 (373)
T ss_dssp GGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEEE
T ss_pred hhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCceEEE
Confidence 47999999999999999999764 57789999997653 34456799999999999999999999999999999999
Q ss_pred EeecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCCC
Q 045553 876 YNYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGTS 955 (1082)
Q Consensus 876 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~ 955 (1082)
|||+++|+|.++++.. ...+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++.....
T Consensus 125 ~e~~~~~sL~~~l~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 200 (373)
T 2qol_A 125 TEYMENGSLDSFLRKH-DAQFTVIQLVGMLRGIASGMKYLSDM---GYVHRDLAARNILINSNLVCKVSDFGLGRVLEDD 200 (373)
T ss_dssp EECCTTCBHHHHHHTT-TTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCC---------
T ss_pred EeCCCCCcHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCcceEEEcCCCCEEECcCccccccccC
Confidence 9999999999999865 45699999999999999999999999 9999999999999999999999999999876543
Q ss_pred CCcc--ccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCccCCCCCccHHHHHHHHHhcCCCccc
Q 045553 956 ETHA--TTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELIS-DKKALDPSFCSFGNGFNIVAWASMLLLQGRPCEF 1032 (1082)
Q Consensus 956 ~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1032 (1082)
.... .....++..|+|||++.+..++.++||||||+++|||++ |+.||... ...+..... ..+
T Consensus 201 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~--------~~~~~~~~i-~~~----- 266 (373)
T 2qol_A 201 PEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEM--------SNQDVIKAV-DEG----- 266 (373)
T ss_dssp -------------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTTC--------CHHHHHHHH-HTT-----
T ss_pred CccceeccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCCC--------CHHHHHHHH-HcC-----
Confidence 3221 222345778999999999999999999999999999998 99998632 122222222 221
Q ss_pred cccccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhhC
Q 045553 1033 FTAGLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQLKQIQ 1078 (1082)
Q Consensus 1033 ~d~~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L~~i~ 1078 (1082)
.....+...+..+.+++.+||+.+|++||++.||++.|+++.
T Consensus 267 ----~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~~i~~~L~~~~ 308 (373)
T 2qol_A 267 ----YRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLI 308 (373)
T ss_dssp ----EECCCCTTCBHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred ----CCCCCCccccHHHHHHHHHHhCcChhhCcCHHHHHHHHHHHH
Confidence 111223455678999999999999999999999999998864
No 69
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Probab=100.00 E-value=6.2e-39 Score=378.68 Aligned_cols=257 Identities=23% Similarity=0.390 Sum_probs=216.4
Q ss_pred hcCccccceecccCceEEEEEEEcCCeEEEEEEeecCccccHHHHHHHHHHHhccCCCceeeEeeeeccCCeEEEEEeec
Q 045553 800 TAGFNVQNCIGSGGFGATYKAEIIPGVVVAVKRLSVGRFQGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFLIYNYL 879 (1082)
Q Consensus 800 ~~~~~~~~~lg~G~~g~Vy~a~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~~ 879 (1082)
.++|++.+.||+|+||.||+|...++..||||+++... ...+.|.+|++++++++||||+++++++. .+..++||||+
T Consensus 187 ~~~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~l~~~~~-~~~~~lv~e~~ 264 (454)
T 1qcf_A 187 RESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHAVVT-KEPIYIITEFM 264 (454)
T ss_dssp GGGEEEEEEEECCSSEEEEEEEETTTEEEEEEEECTTS-BCHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEECCC
T ss_pred hHHeEEEEEcccCCceEEEEEEECCccEEEEEEecCCC-ccHHHHHHHHHHHhhCCCCCEeeEEEEEe-CCccEEEEeec
Confidence 45788999999999999999999889999999997654 45788999999999999999999999986 56789999999
Q ss_pred CCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCCCCCcc
Q 045553 880 PGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGTSETHA 959 (1082)
Q Consensus 880 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~ 959 (1082)
++|+|.++++......+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.........
T Consensus 265 ~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~~~~~~~ 341 (454)
T 1qcf_A 265 AKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQR---NYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTA 341 (454)
T ss_dssp TTCBHHHHHHSHHHHTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCSGGGEEECTTCCEEECSTTGGGGBCCHHHHT
T ss_pred CCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCHHHEEECCCCcEEEeeCCCceEcCCCceec
Confidence 999999999865444689999999999999999999999 99999999999999999999999999998764332222
Q ss_pred ccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCccCCCCCccHHHHHHHHHhcCCCccccccccC
Q 045553 960 TTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELIS-DKKALDPSFCSFGNGFNIVAWASMLLLQGRPCEFFTAGLW 1038 (1082)
Q Consensus 960 ~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 1038 (1082)
.....++..|+|||++.+..++.++|||||||++|||++ |+.||... ...+......... +
T Consensus 342 ~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~~--------~~~~~~~~i~~~~----------~ 403 (454)
T 1qcf_A 342 REGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGM--------SNPEVIRALERGY----------R 403 (454)
T ss_dssp TCSSSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTC--------CHHHHHHHHHHTC----------C
T ss_pred cCCCcccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCCC--------CHHHHHHHHHcCC----------C
Confidence 334456789999999999999999999999999999999 99998632 2223333322221 1
Q ss_pred CCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhhCC
Q 045553 1039 DCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQLKQIQP 1079 (1082)
Q Consensus 1039 ~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L~~i~~ 1079 (1082)
...+...+.++.+++.+||+.||++||||.+|++.|+.+..
T Consensus 404 ~~~~~~~~~~l~~li~~cl~~dp~~RPt~~~i~~~L~~~~~ 444 (454)
T 1qcf_A 404 MPRPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDDFYT 444 (454)
T ss_dssp CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSS
T ss_pred CCCCCCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHHh
Confidence 12234556789999999999999999999999999998864
No 70
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Probab=100.00 E-value=2.4e-39 Score=372.91 Aligned_cols=258 Identities=24% Similarity=0.340 Sum_probs=213.1
Q ss_pred hcCccccceecccCceEEEEEEEc-CCeEEEEEEeecCcc-ccHHHHHHHHHHHhccCCCceeeEeeeeccCCeEEEEEe
Q 045553 800 TAGFNVQNCIGSGGFGATYKAEII-PGVVVAVKRLSVGRF-QGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFLIYN 877 (1082)
Q Consensus 800 ~~~~~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~E 877 (1082)
.++|.+.+.||+|+||.||+|... +++.||||++..... ...+.|.+|++++++++||||+++++++...+..++|||
T Consensus 113 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e 192 (377)
T 3cbl_A 113 HEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVME 192 (377)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTTSCHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSSSCEEEEE
T ss_pred hHHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEccccCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCCCcEEEEE
Confidence 457889999999999999999876 689999999875432 334568899999999999999999999999999999999
Q ss_pred ecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCCCCC
Q 045553 878 YLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGTSET 957 (1082)
Q Consensus 878 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~ 957 (1082)
|+++|+|.++++.. ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.......
T Consensus 193 ~~~~g~L~~~l~~~-~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nil~~~~~~~kl~DfG~s~~~~~~~~ 268 (377)
T 3cbl_A 193 LVQGGDFLTFLRTE-GARLRVKTLLQMVGDAAAGMEYLESK---CCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVY 268 (377)
T ss_dssp CCTTCBHHHHHHHH-GGGCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCGGGCEECTTSEE
T ss_pred cCCCCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHC---CcCCcccCHHHEEEcCCCcEEECcCCCceecCCCce
Confidence 99999999999864 34689999999999999999999999 999999999999999999999999999987543222
Q ss_pred ccc-cCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCccCCCCCccHHHHHHHHHhcCCCcccccc
Q 045553 958 HAT-TDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELIS-DKKALDPSFCSFGNGFNIVAWASMLLLQGRPCEFFTA 1035 (1082)
Q Consensus 958 ~~~-~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 1035 (1082)
... ....++..|+|||++.+..++.++|||||||++|||++ |+.||.... ..+.. ..+..+..
T Consensus 269 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~~--------~~~~~-~~~~~~~~------ 333 (377)
T 3cbl_A 269 AASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLS--------NQQTR-EFVEKGGR------ 333 (377)
T ss_dssp ECCSSCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTSC--------HHHHH-HHHHTTCC------
T ss_pred eecCCCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCC--------HHHHH-HHHHcCCC------
Confidence 111 12235778999999999999999999999999999998 999986321 12222 22222211
Q ss_pred ccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhhCC
Q 045553 1036 GLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQLKQIQP 1079 (1082)
Q Consensus 1036 ~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L~~i~~ 1079 (1082)
...+...+..+.+++.+||+.||++|||+.+|++.|++++.
T Consensus 334 ---~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i~~ 374 (377)
T 3cbl_A 334 ---LPCPELCPDAVFRLMEQCWAYEPGQRPSFSTIYQELQSIRK 374 (377)
T ss_dssp ---CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred ---CCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHh
Confidence 12234456689999999999999999999999999998864
No 71
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=2.5e-38 Score=346.56 Aligned_cols=257 Identities=26% Similarity=0.404 Sum_probs=216.4
Q ss_pred cCccccceecccCceEEEEEEEcCCeEEEEEEeecCccccHHHHHHHHHHHhccCCCceeeEeeeeccCCeEEEEEeecC
Q 045553 801 AGFNVQNCIGSGGFGATYKAEIIPGVVVAVKRLSVGRFQGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFLIYNYLP 880 (1082)
Q Consensus 801 ~~~~~~~~lg~G~~g~Vy~a~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~~~ 880 (1082)
.+|++.+.||+|+||.||+|...+++.||+|++..... ..+.+.+|++++++++||||+++++++.+.+..++||||++
T Consensus 8 ~~y~~~~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 86 (267)
T 3t9t_A 8 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAM-SEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTEFME 86 (267)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTTB-CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEECCCT
T ss_pred hheeeeeEecCCCceeEEEEEecCCCeEEEEEccccCC-CHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCeEEEEeCCC
Confidence 56889999999999999999988899999999976543 35778999999999999999999999999999999999999
Q ss_pred CCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCCCCCccc
Q 045553 881 GGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGTSETHAT 960 (1082)
Q Consensus 881 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~~ 960 (1082)
+++|.+++... ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||.+...........
T Consensus 87 ~~~L~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~~ 162 (267)
T 3t9t_A 87 HGCLSDYLRTQ-RGLFAAETLLGMCLDVCEGMAYLEEA---CVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSS 162 (267)
T ss_dssp TCBHHHHHHHT-TTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECGGGCEEECCTTGGGGBCCHHHHST
T ss_pred CCcHHHHHhhC-cccCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCchheEEECCCCCEEEccccccccccccccccc
Confidence 99999999875 35689999999999999999999999 999999999999999999999999999987643322233
Q ss_pred cCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCccCCCCCccHHHHHHHHHhcCCCccccccccCC
Q 045553 961 TDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELIS-DKKALDPSFCSFGNGFNIVAWASMLLLQGRPCEFFTAGLWD 1039 (1082)
Q Consensus 961 ~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 1039 (1082)
....++..|+|||++.+..++.++||||+|+++|||++ |+.||... ...+....... +.. .
T Consensus 163 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~--------~~~~~~~~i~~-~~~---------~ 224 (267)
T 3t9t_A 163 TGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENR--------SNSEVVEDIST-GFR---------L 224 (267)
T ss_dssp TSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTC--------CHHHHHHHHHT-TCC---------C
T ss_pred ccccccccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCCC--------CHHHHHHHHhc-CCc---------C
Confidence 34567889999999999999999999999999999999 89998632 22233332222 211 1
Q ss_pred CCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhhCCC
Q 045553 1040 CGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQLKQIQPP 1080 (1082)
Q Consensus 1040 ~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L~~i~~~ 1080 (1082)
..+...+..+.+++.+|++.+|++||++.|++++|+++.++
T Consensus 225 ~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~~ 265 (267)
T 3t9t_A 225 YKPRLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAES 265 (267)
T ss_dssp CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred CCCccCcHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhc
Confidence 12233456899999999999999999999999999988643
No 72
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A
Probab=100.00 E-value=3.1e-38 Score=372.10 Aligned_cols=252 Identities=27% Similarity=0.432 Sum_probs=211.1
Q ss_pred hcCccccceecccCceEEEEEEEcCCeEEEEEEeecCccccHHHHHHHHHHHhccCCCceeeEeeeeccCC-eEEEEEee
Q 045553 800 TAGFNVQNCIGSGGFGATYKAEIIPGVVVAVKRLSVGRFQGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEA-EMFLIYNY 878 (1082)
Q Consensus 800 ~~~~~~~~~lg~G~~g~Vy~a~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~-~~~lV~E~ 878 (1082)
..+|++.+.||+|+||.||+|+.. |+.||||+++... ..+.|.+|++++++++||||+++++++.... ..++||||
T Consensus 192 ~~~~~~~~~lG~G~fg~V~~~~~~-~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~iv~e~ 268 (450)
T 1k9a_A 192 MKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEY 268 (450)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEET-TEEEEEEEESSCT--TSHHHHHHHHHHHTCCCTTBCCEEEEEECTTSCEEEEEEC
T ss_pred hHHeEEEeeecCcCCeeEEEEEec-CCeEEEEEeCCch--HHHHHHHHHHHHHhccCCCEEEEEEEEEcCCCceEEEEEe
Confidence 457889999999999999999876 8899999997653 4577999999999999999999999987654 79999999
Q ss_pred cCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCCCCCc
Q 045553 879 LPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGTSETH 958 (1082)
Q Consensus 879 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~ 958 (1082)
+++|+|.++++......+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++......
T Consensus 269 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~-- 343 (450)
T 1k9a_A 269 MAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQ-- 343 (450)
T ss_dssp CTTCBHHHHHHHHCTTTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTSCEEECCCTTCEECC-----
T ss_pred cCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHhhEEECCCCCEEEeeCCCcccccccc--
Confidence 9999999999986555689999999999999999999999 99999999999999999999999999998653221
Q ss_pred cccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCccCCCCCccHHHHHHHHHhcCCCcccccccc
Q 045553 959 ATTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELIS-DKKALDPSFCSFGNGFNIVAWASMLLLQGRPCEFFTAGL 1037 (1082)
Q Consensus 959 ~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 1037 (1082)
....++..|+|||++.+..++.++||||||+++|||++ |+.||..... ... ... +..+.
T Consensus 344 --~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~-----~~~---~~~-i~~~~--------- 403 (450)
T 1k9a_A 344 --DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPL-----KDV---VPR-VEKGY--------- 403 (450)
T ss_dssp -----CCCTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSCT-----TTH---HHH-HHTTC---------
T ss_pred --cCCCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCH-----HHH---HHH-HHcCC---------
Confidence 22357889999999999999999999999999999998 9999874321 111 122 22221
Q ss_pred CCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhhCC
Q 045553 1038 WDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQLKQIQP 1079 (1082)
Q Consensus 1038 ~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L~~i~~ 1079 (1082)
+...+...+..+.+++.+||+.+|++|||+.|+++.|+.+..
T Consensus 404 ~~~~p~~~~~~l~~li~~cl~~dp~~Rpt~~~l~~~L~~i~~ 445 (450)
T 1k9a_A 404 KMDAPDGCPPAVYDVMKNCWHLDAATRPTFLQLREQLEHIRT 445 (450)
T ss_dssp CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred CCCCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHH
Confidence 112344556789999999999999999999999999998754
No 73
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=100.00 E-value=1.1e-37 Score=367.17 Aligned_cols=238 Identities=19% Similarity=0.179 Sum_probs=165.9
Q ss_pred CccccccccccCCCCCCEEEcccCCCcccCChhhcCCCCCCEEeCcCCCCCCCCCccccCCCCCCeEEccCcccccccCc
Q 045553 97 KLSGNLSRAIGDLTQLRVLLLAFNGFSGELPLEIGQLSLLEILDLSFNSFHGPIPPTLQNCSSLRLINLSGNQFNGTIPA 176 (1082)
Q Consensus 97 ~l~g~l~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~ 176 (1082)
...+..+..++++++|++|+|++|.+++ +| .++.+++|++|+|++|.+++ +| ++++++|++|+|++|++++. +
T Consensus 29 ~~~~~~~~~~~~l~~L~~L~Ls~n~l~~-~~-~l~~l~~L~~L~Ls~n~l~~-~~--~~~l~~L~~L~Ls~N~l~~~-~- 101 (457)
T 3bz5_A 29 EMQATDTISEEQLATLTSLDCHNSSITD-MT-GIEKLTGLTKLICTSNNITT-LD--LSQNTNLTYLACDSNKLTNL-D- 101 (457)
T ss_dssp TCCTTSEEEHHHHTTCCEEECCSSCCCC-CT-TGGGCTTCSEEECCSSCCSC-CC--CTTCTTCSEEECCSSCCSCC-C-
T ss_pred CcCcccccChhHcCCCCEEEccCCCccc-Ch-hhcccCCCCEEEccCCcCCe-Ec--cccCCCCCEEECcCCCCcee-e-
Confidence 3455566778889999999999999985 45 68899999999999999985 44 88899999999999998864 3
Q ss_pred cccCCCCCcEEEcccCcccccCCcccccccccccEEEcccCccCCCCCccccCCCCccEEEccCCcCCCCcCccccCCCC
Q 045553 177 FFGQSPGFQVVSLSFNLLSGSVPEEFGDNCVSLEHILLAANSLTGSIPPSLGNCTELRSLLLSSNMLQGDIPSSFGQLVN 256 (1082)
Q Consensus 177 ~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~ 256 (1082)
++.+++|++|++++|++++ +| + ..+++|++|++++|++++. .++++++|++|++++|+..+.+ .+..+++
T Consensus 102 -~~~l~~L~~L~L~~N~l~~-l~--~-~~l~~L~~L~l~~N~l~~l---~l~~l~~L~~L~l~~n~~~~~~--~~~~l~~ 171 (457)
T 3bz5_A 102 -VTPLTKLTYLNCDTNKLTK-LD--V-SQNPLLTYLNCARNTLTEI---DVSHNTQLTELDCHLNKKITKL--DVTPQTQ 171 (457)
T ss_dssp -CTTCTTCCEEECCSSCCSC-CC--C-TTCTTCCEEECTTSCCSCC---CCTTCTTCCEEECTTCSCCCCC--CCTTCTT
T ss_pred -cCCCCcCCEEECCCCcCCe-ec--C-CCCCcCCEEECCCCcccee---ccccCCcCCEEECCCCCccccc--ccccCCc
Confidence 7888888899888888884 44 3 3577888888888888863 3777788888888888554444 4677778
Q ss_pred CCEEeCCCCcCcccCCccccCCCCCcEEEeccccCCcccccCCCCCCcccccCCCcccccCCCCCccccCCCCCcEEEcC
Q 045553 257 LEVLDLSRNFLSGIVPSELGMCKQLKVLVLRNDYGPLYSREHGDLPIQPVVDGGEDYNFFDGGLPDSITRLPNLRVFWAP 336 (1082)
Q Consensus 257 L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~n~~~~~~~~~~~l~~~~~~~~~~~~n~~~~~~p~~l~~l~~L~~L~l~ 336 (1082)
|++|++++|++++ +| ++.+++|+.|++++|
T Consensus 172 L~~L~ls~n~l~~-l~--l~~l~~L~~L~l~~N----------------------------------------------- 201 (457)
T 3bz5_A 172 LTTLDCSFNKITE-LD--VSQNKLLNRLNCDTN----------------------------------------------- 201 (457)
T ss_dssp CCEEECCSSCCCC-CC--CTTCTTCCEEECCSS-----------------------------------------------
T ss_pred CCEEECCCCccce-ec--cccCCCCCEEECcCC-----------------------------------------------
Confidence 8888888887775 33 555666666666553
Q ss_pred CCcccCCCCcccccccCCCeEEcCCccccCCCCccccCCCCCCEEecCCCcCcccCCCCcccCcccEEEecCCcc
Q 045553 337 NLNLEGIFPQNWELCSKLEMLNLAHNFFTGQIPASLGNCKSLYFLDLSSNNLTGLLPEEVSVPCMAVFNVSQNLL 411 (1082)
Q Consensus 337 ~n~l~~~~~~~l~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~l~~L~~L~l~~N~l 411 (1082)
++.+. .+..+++|++|++++|++++ +| +..+++|+.|++++|++++.++. .+++|+.|++++|.+
T Consensus 202 --~l~~~---~l~~l~~L~~L~Ls~N~l~~-ip--~~~l~~L~~L~l~~N~l~~~~~~--~l~~L~~L~l~~n~L 266 (457)
T 3bz5_A 202 --NITKL---DLNQNIQLTFLDCSSNKLTE-ID--VTPLTQLTYFDCSVNPLTELDVS--TLSKLTTLHCIQTDL 266 (457)
T ss_dssp --CCSCC---CCTTCTTCSEEECCSSCCSC-CC--CTTCTTCSEEECCSSCCSCCCCT--TCTTCCEEECTTCCC
T ss_pred --cCCee---ccccCCCCCEEECcCCcccc-cC--ccccCCCCEEEeeCCcCCCcCHH--HCCCCCEEeccCCCC
Confidence 33332 14445556666666666664 33 55566666666666666654322 344555555555543
No 74
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Probab=100.00 E-value=4.6e-38 Score=355.14 Aligned_cols=248 Identities=23% Similarity=0.296 Sum_probs=209.6
Q ss_pred cCccccceecccCceEEEEEEEc-CCeEEEEEEeecC---ccccHHHHHHHHHHHhccCCCceeeEeeeeccCCeEEEEE
Q 045553 801 AGFNVQNCIGSGGFGATYKAEII-PGVVVAVKRLSVG---RFQGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFLIY 876 (1082)
Q Consensus 801 ~~~~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 876 (1082)
++|++.+.||+|+||+||+|+.. +|+.||+|++... .......+.+|+++++.++||||+++++++.+.+..++||
T Consensus 5 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~ 84 (337)
T 1o6l_A 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVM 84 (337)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HHeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCCEEEEEE
Confidence 57999999999999999999765 6899999999754 2344667889999999999999999999999999999999
Q ss_pred eecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCCCC
Q 045553 877 NYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGTSE 956 (1082)
Q Consensus 877 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~ 956 (1082)
||+++|+|.+++... ..+++..+..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+++......
T Consensus 85 E~~~gg~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~ 159 (337)
T 1o6l_A 85 EYANGGELFFHLSRE--RVFTEERARFYGAEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDG 159 (337)
T ss_dssp ECCTTCBHHHHHHHH--SCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCSCCTT
T ss_pred eCCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCcCCHHHEEECCCCCEEEeeccchhhcccCC
Confidence 999999999999863 4689999999999999999999999 99999999999999999999999999998643222
Q ss_pred CccccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCCCccccccc
Q 045553 957 THATTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQGRPCEFFTAG 1036 (1082)
Q Consensus 957 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 1036 (1082)
.......||+.|+|||++.+..++.++||||+||++|||++|+.||... +............ .
T Consensus 160 -~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~--------~~~~~~~~i~~~~-~------- 222 (337)
T 1o6l_A 160 -ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQ--------DHERLFELILMEE-I------- 222 (337)
T ss_dssp -CCBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCS--------SHHHHHHHHHHCC-C-------
T ss_pred -CcccccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCCC--------CHHHHHHHHHcCC-C-------
Confidence 2334568999999999999999999999999999999999999999632 2233333333221 1
Q ss_pred cCCCCChHHHHHHHHHHHHcccCCCCCCC-----CHHHHHHH
Q 045553 1037 LWDCGPHDDLIEMLNLAIMCTGESLSSRP-----SMRQVAQQ 1073 (1082)
Q Consensus 1037 l~~~~~~~~~~~l~~li~~cl~~~p~~RP-----t~~ev~~~ 1073 (1082)
..|...+.++.+++.+|++.||++|| ++.||+++
T Consensus 223 ---~~p~~~s~~~~~li~~lL~~dP~~R~g~~~~~~~ei~~h 261 (337)
T 1o6l_A 223 ---RFPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEH 261 (337)
T ss_dssp ---CCCTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTS
T ss_pred ---CCCCCCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHHcC
Confidence 12334456899999999999999999 89998764
No 75
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7
Probab=100.00 E-value=4e-38 Score=358.60 Aligned_cols=262 Identities=26% Similarity=0.410 Sum_probs=216.0
Q ss_pred HhcCccccceecccCceEEEEEEEc------CCeEEEEEEeecCc-cccHHHHHHHHHHHhccCCCceeeEeeeeccCCe
Q 045553 799 ATAGFNVQNCIGSGGFGATYKAEII------PGVVVAVKRLSVGR-FQGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAE 871 (1082)
Q Consensus 799 ~~~~~~~~~~lg~G~~g~Vy~a~~~------~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~ 871 (1082)
..++|++.+.||+|+||.||+|+.. +++.||||++.... ....+.+.+|++++++++||||+++++++.+.+.
T Consensus 45 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~ 124 (343)
T 1luf_A 45 PRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVGKP 124 (343)
T ss_dssp CGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSS
T ss_pred cHHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEccCCc
Confidence 4578999999999999999999764 34899999997653 2345678999999999999999999999999999
Q ss_pred EEEEEeecCCCCHHHHHhhCC----------------------CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCC
Q 045553 872 MFLIYNYLPGGNLEKFIQDRP----------------------RRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIK 929 (1082)
Q Consensus 872 ~~lV~E~~~~gsL~~~l~~~~----------------------~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk 929 (1082)
.++||||+++|+|.++++... ...+++.+++.++.|+++||+|||+. +|+|||||
T Consensus 125 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlk 201 (343)
T 1luf_A 125 MCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSER---KFVHRDLA 201 (343)
T ss_dssp CEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCS
T ss_pred eEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCC
Confidence 999999999999999998743 15689999999999999999999999 99999999
Q ss_pred CCCEEEcCCCcEEEeecccceecCCCCC-ccccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCc
Q 045553 930 PSNILLDNNLNAYLSDFGLARLLGTSET-HATTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELIS-DKKALDPSF 1007 (1082)
Q Consensus 930 ~~Nill~~~~~~kl~DfGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~ellt-g~~p~~~~~ 1007 (1082)
|+||+++.++.+||+|||+++....... .......|++.|+|||++.+..++.++||||||+++|||++ |+.||...
T Consensus 202 p~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~- 280 (343)
T 1luf_A 202 TRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGM- 280 (343)
T ss_dssp GGGEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTS-
T ss_pred cceEEECCCCeEEEeecCCCcccccCccccccCCCcccceecChhhhccCCcCcccccHHHHHHHHHHHhcCCCcCCCC-
Confidence 9999999999999999999987643322 22334568899999999999999999999999999999999 99998632
Q ss_pred cCCCCCccHHHHHHHHHhcCCCccccccccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhhCCCC
Q 045553 1008 CSFGNGFNIVAWASMLLLQGRPCEFFTAGLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQLKQIQPPA 1081 (1082)
Q Consensus 1008 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L~~i~~~~ 1081 (1082)
...+..... ..+... ..+...+..+.+++.+||+.+|++||++.||++.|+++....
T Consensus 281 -------~~~~~~~~~-~~~~~~---------~~~~~~~~~l~~li~~~l~~~p~~Rps~~~~~~~L~~~~~~~ 337 (343)
T 1luf_A 281 -------AHEEVIYYV-RDGNIL---------ACPENCPLELYNLMRLCWSKLPADRPSFCSIHRILQRMCERA 337 (343)
T ss_dssp -------CHHHHHHHH-HTTCCC---------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC--
T ss_pred -------ChHHHHHHH-hCCCcC---------CCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHHHHHHhhh
Confidence 222333322 222221 123345568999999999999999999999999999987653
No 76
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Probab=100.00 E-value=2.3e-38 Score=373.36 Aligned_cols=257 Identities=24% Similarity=0.390 Sum_probs=209.9
Q ss_pred hcCccccceecccCceEEEEEEEcCCeEEEEEEeecCccccHHHHHHHHHHHhccCCCceeeEeeeeccCCeEEEEEeec
Q 045553 800 TAGFNVQNCIGSGGFGATYKAEIIPGVVVAVKRLSVGRFQGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFLIYNYL 879 (1082)
Q Consensus 800 ~~~~~~~~~lg~G~~g~Vy~a~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~~ 879 (1082)
.++|++.+.||+|+||.||+|.+.++..||||+++... ...+.|.+|++++++++||||+++++++.+ +..++||||+
T Consensus 183 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~~iv~e~~ 260 (452)
T 1fmk_A 183 RESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYM 260 (452)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEECCC
T ss_pred hhHceeeeeecCCCCeEEEEEEECCCceEEEEEeccCC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEcC-CceEEEehhh
Confidence 45688899999999999999999888899999997654 345789999999999999999999999876 6789999999
Q ss_pred CCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCCCCCcc
Q 045553 880 PGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGTSETHA 959 (1082)
Q Consensus 880 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~ 959 (1082)
++|+|.++++......+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.........
T Consensus 261 ~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~ 337 (452)
T 1fmk_A 261 SKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTA 337 (452)
T ss_dssp TTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCCCTTC---------
T ss_pred cCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChhhEEECCCCCEEECCCccceecCCCceec
Confidence 999999999864445689999999999999999999999 99999999999999999999999999998765433333
Q ss_pred ccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCccCCCCCccHHHHHHHHHhcCCCccccccccC
Q 045553 960 TTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELIS-DKKALDPSFCSFGNGFNIVAWASMLLLQGRPCEFFTAGLW 1038 (1082)
Q Consensus 960 ~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 1038 (1082)
.....++..|+|||++.+..++.++||||||+++|||++ |+.||... ...+...... .+. +
T Consensus 338 ~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~--------~~~~~~~~i~-~~~---------~ 399 (452)
T 1fmk_A 338 RQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGM--------VNREVLDQVE-RGY---------R 399 (452)
T ss_dssp -----CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTC--------CHHHHHHHHH-TTC---------C
T ss_pred ccCCcccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCCC--------CHHHHHHHHH-cCC---------C
Confidence 334557889999999999999999999999999999999 89998632 2223333222 221 1
Q ss_pred CCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhhCC
Q 045553 1039 DCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQLKQIQP 1079 (1082)
Q Consensus 1039 ~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L~~i~~ 1079 (1082)
...+...+..+.+++.+||+.+|++|||+.+|++.|+.+..
T Consensus 400 ~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~~l~~~L~~~~~ 440 (452)
T 1fmk_A 400 MPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFT 440 (452)
T ss_dssp CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTTTS
T ss_pred CCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhc
Confidence 12334556789999999999999999999999999998754
No 77
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...
Probab=100.00 E-value=8.8e-39 Score=354.43 Aligned_cols=258 Identities=25% Similarity=0.409 Sum_probs=218.9
Q ss_pred HhcCccccceecccCceEEEEEEEcC-CeEEEEEEeecCccccHHHHHHHHHHHhccCCCceeeEeeeeccCCeEEEEEe
Q 045553 799 ATAGFNVQNCIGSGGFGATYKAEIIP-GVVVAVKRLSVGRFQGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFLIYN 877 (1082)
Q Consensus 799 ~~~~~~~~~~lg~G~~g~Vy~a~~~~-~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~E 877 (1082)
...+|++.+.||+|+||.||+|.... +..||+|++.... ...+.+.+|++++++++||||+++++++.+....++|||
T Consensus 11 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e 89 (288)
T 3kfa_A 11 ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITE 89 (288)
T ss_dssp CGGGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSCS-THHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEE
T ss_pred cccceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcCH-HHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCEEEEEE
Confidence 45679999999999999999997664 8899999997543 446789999999999999999999999999999999999
Q ss_pred ecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCCCCC
Q 045553 878 YLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGTSET 957 (1082)
Q Consensus 878 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~ 957 (1082)
|+++++|.+++.......+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||.+........
T Consensus 90 ~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~ 166 (288)
T 3kfa_A 90 FMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTY 166 (288)
T ss_dssp CCTTEEHHHHHHHCCTTTSCHHHHHHHHHHHHHHHHHHHHH---TCCCSCCSGGGEEECGGGCEEECCCCGGGTSCSSSS
T ss_pred cCCCCcHHHHHHhcccCCccHhHHHHHHHHHHHHHHHHHHC---CccCCCCCcceEEEcCCCCEEEccCccceeccCCcc
Confidence 99999999999987677899999999999999999999999 999999999999999999999999999987765544
Q ss_pred ccccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCccCCCCCccHHHHHHHHHhcCCCccccccc
Q 045553 958 HATTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELIS-DKKALDPSFCSFGNGFNIVAWASMLLLQGRPCEFFTAG 1036 (1082)
Q Consensus 958 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 1036 (1082)
.......+++.|+|||++.+..++.++||||+|+++|+|++ |..||..... ..... .. ...
T Consensus 167 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~~~-----~~~~~---~~-~~~--------- 228 (288)
T 3kfa_A 167 TAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDL-----SQVYE---LL-EKD--------- 228 (288)
T ss_dssp EEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCG-----GGHHH---HH-HTT---------
T ss_pred ccccCCccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCH-----HHHHH---HH-hcc---------
Confidence 44455567889999999999999999999999999999999 9899864321 11111 11 111
Q ss_pred cCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhhC
Q 045553 1037 LWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQLKQIQ 1078 (1082)
Q Consensus 1037 l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L~~i~ 1078 (1082)
.....+...+..+.+++.+|++.+|++||++.|+++.|+.+.
T Consensus 229 ~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~~~~l~~~~ 270 (288)
T 3kfa_A 229 YRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMF 270 (288)
T ss_dssp CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred CCCCCCCCCCHHHHHHHHHHhCCChhhCcCHHHHHHHHHHHH
Confidence 111223445578999999999999999999999999998753
No 78
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}
Probab=100.00 E-value=7.2e-38 Score=361.44 Aligned_cols=258 Identities=26% Similarity=0.419 Sum_probs=215.1
Q ss_pred hcCccccceecccCceEEEEEEEc--------CCeEEEEEEeecCc-cccHHHHHHHHHHHhcc-CCCceeeEeeeeccC
Q 045553 800 TAGFNVQNCIGSGGFGATYKAEII--------PGVVVAVKRLSVGR-FQGVQQFAAEIRTLGRV-QHPNLVTLIGYHVSE 869 (1082)
Q Consensus 800 ~~~~~~~~~lg~G~~g~Vy~a~~~--------~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~ 869 (1082)
.++|.+.+.||+|+||.||+|+.. .+..||||++.... ....+.+.+|+++++++ +||||+++++++...
T Consensus 68 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~ 147 (382)
T 3tt0_A 68 RDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQD 147 (382)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred hhheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHHHHHHhcCCchhhhheeeeccC
Confidence 457899999999999999999752 24689999997653 33457789999999999 999999999999999
Q ss_pred CeEEEEEeecCCCCHHHHHhhCC--------------CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEE
Q 045553 870 AEMFLIYNYLPGGNLEKFIQDRP--------------RRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILL 935 (1082)
Q Consensus 870 ~~~~lV~E~~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill 935 (1082)
+..++||||+++|+|.+++.... ...+++..++.++.|++.||+|||+. +|+||||||+||++
T Consensus 148 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll 224 (382)
T 3tt0_A 148 GPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK---KCIHRDLAARNVLV 224 (382)
T ss_dssp SSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEE
T ss_pred CceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCcceEEE
Confidence 99999999999999999998754 24599999999999999999999999 99999999999999
Q ss_pred cCCCcEEEeecccceecCCCCC-ccccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCccCCCCC
Q 045553 936 DNNLNAYLSDFGLARLLGTSET-HATTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELIS-DKKALDPSFCSFGNG 1013 (1082)
Q Consensus 936 ~~~~~~kl~DfGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~ellt-g~~p~~~~~~~~~~~ 1013 (1082)
+.++.+||+|||+++....... .......+++.|+|||++.+..++.++|||||||++|||++ |+.||...
T Consensus 225 ~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~ellt~g~~p~~~~------- 297 (382)
T 3tt0_A 225 TEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGV------- 297 (382)
T ss_dssp CTTCCEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCSSTTC-------
T ss_pred cCCCcEEEcccCcccccccccccccccCCCCCcceeCHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCC-------
Confidence 9999999999999987654332 23334567889999999999999999999999999999999 99998632
Q ss_pred ccHHHHHHHHHhcCCCccccccccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhhC
Q 045553 1014 FNIVAWASMLLLQGRPCEFFTAGLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQLKQIQ 1078 (1082)
Q Consensus 1014 ~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L~~i~ 1078 (1082)
...+...... .+... ..+...+.++.+++.+||+.+|++||++.||++.|+++.
T Consensus 298 -~~~~~~~~~~-~~~~~---------~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~ 351 (382)
T 3tt0_A 298 -PVEELFKLLK-EGHRM---------DKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIV 351 (382)
T ss_dssp -CHHHHHHHHH-TTCCC---------CCCSSCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred -CHHHHHHHHH-cCCCC---------CCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 2233333322 22111 123344568999999999999999999999999998874
No 79
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Probab=100.00 E-value=6.6e-38 Score=357.13 Aligned_cols=252 Identities=21% Similarity=0.303 Sum_probs=209.3
Q ss_pred HhcCccccceecccCceEEEEEEEc-CCeEEEEEEeecCccc------cHHHHHHHHHHHhccCCCceeeEeeeeccCCe
Q 045553 799 ATAGFNVQNCIGSGGFGATYKAEII-PGVVVAVKRLSVGRFQ------GVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAE 871 (1082)
Q Consensus 799 ~~~~~~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~~~------~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~ 871 (1082)
..+.|++.+.||+|+||.||+|... +|+.||+|++...... ..+.+.+|++++++++||||+++++++.+...
T Consensus 10 ~~~~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~ 89 (361)
T 2yab_A 10 VEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRTD 89 (361)
T ss_dssp GGGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSE
T ss_pred hhhceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeCCE
Confidence 3567999999999999999999765 6899999999764321 35789999999999999999999999999999
Q ss_pred EEEEEeecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCC----cEEEeecc
Q 045553 872 MFLIYNYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNL----NAYLSDFG 947 (1082)
Q Consensus 872 ~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~----~~kl~DfG 947 (1082)
.++||||+++|+|.+++... ..+++..+..++.||+.||+|||+. +|+||||||+||+++.++ .+||+|||
T Consensus 90 ~~lv~e~~~gg~L~~~l~~~--~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~~~~vkl~DFG 164 (361)
T 2yab_A 90 VVLILELVSGGELFDFLAQK--ESLSEEEATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFG 164 (361)
T ss_dssp EEEEEECCCSCBHHHHHTTC--SCCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESCTTSSSCCEEECCCS
T ss_pred EEEEEEcCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEeCCCCCccCEEEEecC
Confidence 99999999999999999763 4699999999999999999999999 999999999999998877 79999999
Q ss_pred cceecCCCCCccccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcC
Q 045553 948 LARLLGTSETHATTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQG 1027 (1082)
Q Consensus 948 la~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 1027 (1082)
++....... ......||+.|+|||++.+..++.++||||+||++|+|++|..||... ...+....+....
T Consensus 165 ~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~~--------~~~~~~~~i~~~~ 234 (361)
T 2yab_A 165 LAHEIEDGV--EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGD--------TKQETLANITAVS 234 (361)
T ss_dssp SCEECCTTC--CCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCS--------SHHHHHHHHHTTC
T ss_pred CceEcCCCC--ccccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCC--------CHHHHHHHHHhcC
Confidence 998765432 234567999999999999999999999999999999999999999642 2223333322211
Q ss_pred CCccccccccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 045553 1028 RPCEFFTAGLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQ 1072 (1082)
Q Consensus 1028 ~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~ 1072 (1082)
.. +++... ...+..+.+++.+|++.||++|||+.|+++
T Consensus 235 -~~--~~~~~~----~~~s~~~~~li~~~L~~dP~~R~t~~e~l~ 272 (361)
T 2yab_A 235 -YD--FDEEFF----SQTSELAKDFIRKLLVKETRKRLTIQEALR 272 (361)
T ss_dssp -CC--CCHHHH----TTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred -CC--CCchhc----cCCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 10 011111 123467899999999999999999999985
No 80
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*
Probab=100.00 E-value=1.6e-38 Score=364.24 Aligned_cols=269 Identities=23% Similarity=0.346 Sum_probs=217.4
Q ss_pred ccHHHHHHHhcCccccceecccCceEEEEEEEc------CCeEEEEEEeecCcc-ccHHHHHHHHHHHhcc-CCCceeeE
Q 045553 791 LTYENVVRATAGFNVQNCIGSGGFGATYKAEII------PGVVVAVKRLSVGRF-QGVQQFAAEIRTLGRV-QHPNLVTL 862 (1082)
Q Consensus 791 ~~~~~~~~~~~~~~~~~~lg~G~~g~Vy~a~~~------~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l-~h~niv~l 862 (1082)
+.........++|++.+.||+|+||.||+|++. +++.||||++..... ...+.+.+|+++++++ +||||+++
T Consensus 12 ~~~~~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~ 91 (359)
T 3vhe_A 12 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNL 91 (359)
T ss_dssp CCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCE
T ss_pred CCcccccccccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcCCHHHHHHHHHHHHHHHhhcCCcceeee
Confidence 444555556788999999999999999999642 458999999976433 3456799999999999 78999999
Q ss_pred eeeeccCC-eEEEEEeecCCCCHHHHHhhCCC------------------------------------------------
Q 045553 863 IGYHVSEA-EMFLIYNYLPGGNLEKFIQDRPR------------------------------------------------ 893 (1082)
Q Consensus 863 ~~~~~~~~-~~~lV~E~~~~gsL~~~l~~~~~------------------------------------------------ 893 (1082)
++++.+.+ ..++||||+++|+|.++++....
T Consensus 92 ~~~~~~~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (359)
T 3vhe_A 92 LGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEK 171 (359)
T ss_dssp EEEECSTTSCCEEEEECCTTEEHHHHHHTTTTSBCSCC------------------------------------------
T ss_pred eeeeecCCCceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCcccccccccccccc
Confidence 99988755 48999999999999999987532
Q ss_pred ----------------CCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCCCCC
Q 045553 894 ----------------RTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGTSET 957 (1082)
Q Consensus 894 ----------------~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~ 957 (1082)
..+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.......
T Consensus 172 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~ 248 (359)
T 3vhe_A 172 SLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPD 248 (359)
T ss_dssp ------------CTTTTCBCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCCGGGSCTTSCTT
T ss_pred ccchhhhcccccchhccccCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChhhEEEcCCCcEEEEeccceeeeccccc
Confidence 1289999999999999999999999 999999999999999999999999999987644332
Q ss_pred -ccccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCccCCCCCccHHHHHHHHHhcCCCcccccc
Q 045553 958 -HATTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELIS-DKKALDPSFCSFGNGFNIVAWASMLLLQGRPCEFFTA 1035 (1082)
Q Consensus 958 -~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 1035 (1082)
.......||+.|+|||++.+..++.++||||||+++|||++ |+.||...... ..+......+...
T Consensus 249 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~--------~~~~~~~~~~~~~----- 315 (359)
T 3vhe_A 249 YVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID--------EEFCRRLKEGTRM----- 315 (359)
T ss_dssp CEEC--CEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCS--------HHHHHHHHHTCCC-----
T ss_pred chhccccCCCceeEChhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCccchh--------HHHHHHHHcCCCC-----
Confidence 23345678999999999999999999999999999999998 99999643211 1122222222111
Q ss_pred ccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhhCC
Q 045553 1036 GLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQLKQIQP 1079 (1082)
Q Consensus 1036 ~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L~~i~~ 1079 (1082)
..+...+.++.+++.+|++.+|++||++.||+++|+++..
T Consensus 316 ----~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~ 355 (359)
T 3vhe_A 316 ----RAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ 355 (359)
T ss_dssp ----CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred ----CCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHHH
Confidence 1233345689999999999999999999999999998753
No 81
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*
Probab=100.00 E-value=2.4e-38 Score=349.58 Aligned_cols=256 Identities=27% Similarity=0.410 Sum_probs=199.2
Q ss_pred hcCccccceecccCceEEEEEEEcC----CeEEEEEEeecCc-cccHHHHHHHHHHHhccCCCceeeEeeeeccCCeEEE
Q 045553 800 TAGFNVQNCIGSGGFGATYKAEIIP----GVVVAVKRLSVGR-FQGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFL 874 (1082)
Q Consensus 800 ~~~~~~~~~lg~G~~g~Vy~a~~~~----~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 874 (1082)
.++|++.+.||+|+||.||+|.... +..||+|++.... ....+.+.+|+.++++++||||+++++++. ++..++
T Consensus 14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~l 92 (281)
T 1mp8_A 14 RERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVWI 92 (281)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC-SSSCEE
T ss_pred hHHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCccceEEEEEc-cCccEE
Confidence 4579999999999999999997642 5679999987543 334567899999999999999999999984 567899
Q ss_pred EEeecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCC
Q 045553 875 IYNYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGT 954 (1082)
Q Consensus 875 V~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~ 954 (1082)
||||+++++|.+++... ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++....
T Consensus 93 v~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 168 (281)
T 1mp8_A 93 IMELCTLGELRSFLQVR-KYSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMED 168 (281)
T ss_dssp EEECCTTEEHHHHHHHT-TTTSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECC---------
T ss_pred EEecCCCCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHhC---CeecccccHHHEEECCCCCEEECccccccccCc
Confidence 99999999999999875 44689999999999999999999999 999999999999999999999999999987755
Q ss_pred CCCccccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCccCCCCCccHHHHHHHHHhcCCCcccc
Q 045553 955 SETHATTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELIS-DKKALDPSFCSFGNGFNIVAWASMLLLQGRPCEFF 1033 (1082)
Q Consensus 955 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1033 (1082)
..........+++.|+|||++.+..++.++||||||+++|||++ |..||..... .... ... ..+...
T Consensus 169 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~~~-----~~~~---~~i-~~~~~~--- 236 (281)
T 1mp8_A 169 STYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKN-----NDVI---GRI-ENGERL--- 236 (281)
T ss_dssp ----------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCG-----GGHH---HHH-HTTCCC---
T ss_pred ccccccccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCcCCH-----HHHH---HHH-HcCCCC---
Confidence 44333344567889999999999999999999999999999996 9999874321 1221 121 111111
Q ss_pred ccccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhhC
Q 045553 1034 TAGLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQLKQIQ 1078 (1082)
Q Consensus 1034 d~~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L~~i~ 1078 (1082)
..+...+..+.+++.+|++.+|++||++.|+++.|+++.
T Consensus 237 ------~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~ 275 (281)
T 1mp8_A 237 ------PMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTIL 275 (281)
T ss_dssp ------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred ------CCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 123345578999999999999999999999999998874
No 82
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*
Probab=100.00 E-value=7.5e-38 Score=343.52 Aligned_cols=253 Identities=23% Similarity=0.317 Sum_probs=211.6
Q ss_pred hcCccccceecccCceEEEEEEEcCCeEEEEEEeecCc--cccHHHHHHHHHHHhccCCCceeeEeeeeccC--CeEEEE
Q 045553 800 TAGFNVQNCIGSGGFGATYKAEIIPGVVVAVKRLSVGR--FQGVQQFAAEIRTLGRVQHPNLVTLIGYHVSE--AEMFLI 875 (1082)
Q Consensus 800 ~~~~~~~~~lg~G~~g~Vy~a~~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~--~~~~lV 875 (1082)
.++|++.+.||+|+||.||+|+.. ++.||||++.... ....+.+.+|++++++++||||+++++++.+. ...++|
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv 87 (271)
T 3kmu_A 9 FKQLNFLTKLNENHSGELWKGRWQ-GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLI 87 (271)
T ss_dssp GGGCEEEEEEEEETTEEEEEEEET-TEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSSCEEE
T ss_pred HHHhHHHHHhcCCCcceEEEEEEC-CeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCCCeEee
Confidence 357899999999999999999875 8999999997653 34456799999999999999999999999877 788999
Q ss_pred EeecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCC--eEeccCCCCCEEEcCCCcEEEeecccceecC
Q 045553 876 YNYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPR--VLHRDIKPSNILLDNNLNAYLSDFGLARLLG 953 (1082)
Q Consensus 876 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~--ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~ 953 (1082)
|||+++|+|.++++......+++..+..++.|++.||+|||+. + |+||||||+||+++.++.++|+|||++....
T Consensus 88 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~~~i~H~dikp~Nil~~~~~~~~l~~~~~~~~~~ 164 (271)
T 3kmu_A 88 THWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLHTL---EPLIPRHALNSRSVMIDEDMTARISMADVKFSFQ 164 (271)
T ss_dssp EECCTTCBHHHHHHSCSSCCCCHHHHHHHHHHHHHHHHHHTTS---SSCCTTCCCSGGGEEECTTSCEEEEGGGSCCTTS
T ss_pred ecccCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcC---CCceecCCCccceEEEcCCcceeEEeccceeeec
Confidence 9999999999999986555799999999999999999999998 7 9999999999999999999999999875432
Q ss_pred CCCCccccCcccCCCcccchhcccCCCC---chhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCCCc
Q 045553 954 TSETHATTDVAGTFGYVAPEYAMTCRVS---DKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQGRPC 1030 (1082)
Q Consensus 954 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~---~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1030 (1082)
. ....||+.|+|||++.+..++ .++||||||+++|||++|+.||... ............+...
T Consensus 165 ~------~~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~--------~~~~~~~~~~~~~~~~ 230 (271)
T 3kmu_A 165 S------PGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADL--------SNMEIGMKVALEGLRP 230 (271)
T ss_dssp C------TTCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTS--------CHHHHHHHHHHSCCCC
T ss_pred c------cCccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCcccc--------ChHHHHHHHHhcCCCC
Confidence 2 234689999999999876544 4899999999999999999999632 2223333333332211
Q ss_pred cccccccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhhCC
Q 045553 1031 EFFTAGLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQLKQIQP 1079 (1082)
Q Consensus 1031 ~~~d~~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L~~i~~ 1079 (1082)
..+...+..+.+++.+|++.||++|||+.|+++.|+++++
T Consensus 231 ---------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~L~~l~~ 270 (271)
T 3kmu_A 231 ---------TIPPGISPHVSKLMKICMNEDPAKRPKFDMIVPILEKMQD 270 (271)
T ss_dssp ---------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHCC
T ss_pred ---------CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhc
Confidence 2233455689999999999999999999999999999875
No 83
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*
Probab=100.00 E-value=4.2e-38 Score=353.63 Aligned_cols=259 Identities=24% Similarity=0.394 Sum_probs=214.9
Q ss_pred hcCccccceecccCceEEEEEEE------cCCeEEEEEEeecCc-cccHHHHHHHHHHHhccCCCceeeEeeeeccCCeE
Q 045553 800 TAGFNVQNCIGSGGFGATYKAEI------IPGVVVAVKRLSVGR-FQGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEM 872 (1082)
Q Consensus 800 ~~~~~~~~~lg~G~~g~Vy~a~~------~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~ 872 (1082)
..+|.+.+.||+|+||.||+|.. .++..||||++.... ....+.+.+|++++++++||||+++++++.+.+..
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~ 101 (314)
T 2ivs_A 22 RKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPL 101 (314)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSC
T ss_pred hhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCceeeEEEEEecCCce
Confidence 45799999999999999999975 235899999997543 34457789999999999999999999999999999
Q ss_pred EEEEeecCCCCHHHHHhhCCC----------------------CCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCC
Q 045553 873 FLIYNYLPGGNLEKFIQDRPR----------------------RTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKP 930 (1082)
Q Consensus 873 ~lV~E~~~~gsL~~~l~~~~~----------------------~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~ 930 (1082)
++||||+++++|.+++..... ..+++..++.++.|+++||+|||+. +|+||||||
T Consensus 102 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dikp 178 (314)
T 2ivs_A 102 LLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEM---KLVHRDLAA 178 (314)
T ss_dssp EEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHHT---TEECCCCSG
T ss_pred EEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHHC---CCcccccch
Confidence 999999999999999987532 3489999999999999999999999 999999999
Q ss_pred CCEEEcCCCcEEEeecccceecCCCCCc-cccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCcc
Q 045553 931 SNILLDNNLNAYLSDFGLARLLGTSETH-ATTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELIS-DKKALDPSFC 1008 (1082)
Q Consensus 931 ~Nill~~~~~~kl~DfGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~ellt-g~~p~~~~~~ 1008 (1082)
+||+++.++.+||+|||+++........ ......+++.|+|||++.+..++.++||||+|+++|||++ |+.||.....
T Consensus 179 ~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~ 258 (314)
T 2ivs_A 179 RNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPP 258 (314)
T ss_dssp GGEEEETTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCG
T ss_pred heEEEcCCCCEEEccccccccccccccceeccCCCCcccccChhhhcCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCCH
Confidence 9999999999999999999877544332 2334467889999999999999999999999999999999 9999864321
Q ss_pred CCCCCccHHHHHHHHHhcCCCccccccccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhhCC
Q 045553 1009 SFGNGFNIVAWASMLLLQGRPCEFFTAGLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQLKQIQP 1079 (1082)
Q Consensus 1009 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L~~i~~ 1079 (1082)
..... .+..+.. ...+...+..+.+++.+|++.||++||++.|++++|+++..
T Consensus 259 -----~~~~~----~~~~~~~---------~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~l~~~l~~~~~ 311 (314)
T 2ivs_A 259 -----ERLFN----LLKTGHR---------MERPDNCSEEMYRLMLQCWKQEPDKRPVFADISKDLEKMMV 311 (314)
T ss_dssp -----GGHHH----HHHTTCC---------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred -----HHHHH----HhhcCCc---------CCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 12211 2222211 11233455689999999999999999999999999998753
No 84
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0
Probab=100.00 E-value=7.8e-38 Score=343.49 Aligned_cols=254 Identities=30% Similarity=0.467 Sum_probs=199.0
Q ss_pred hcCccccceecccCceEEEEEEEcCCeEEEEEEeecCcc----ccHHHHHHHHHHHhccCCCceeeEeeeeccCCeEEEE
Q 045553 800 TAGFNVQNCIGSGGFGATYKAEIIPGVVVAVKRLSVGRF----QGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFLI 875 (1082)
Q Consensus 800 ~~~~~~~~~lg~G~~g~Vy~a~~~~~~~vavK~~~~~~~----~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV 875 (1082)
..+|++.+.||+|+||.||+|... ++.||||++..... ...+.+.+|+++++.++||||+++++++.+.+..++|
T Consensus 6 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 84 (271)
T 3dtc_A 6 FAELTLEEIIGIGGFGKVYRAFWI-GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLV 84 (271)
T ss_dssp TTSEEEEEEEEEETTEEEEEEEET-TEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC--CEEE
T ss_pred hhheeeeeeeccCCCeEEEEEEEc-CCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceEEE
Confidence 357999999999999999999875 89999999865432 3356789999999999999999999999999999999
Q ss_pred EeecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcC--------CCcEEEeecc
Q 045553 876 YNYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDN--------NLNAYLSDFG 947 (1082)
Q Consensus 876 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~--------~~~~kl~DfG 947 (1082)
|||+++++|.+++.. ..+++..+..++.|++.|++|||+....+|+||||||+||+++. ++.+||+|||
T Consensus 85 ~e~~~~~~L~~~~~~---~~~~~~~~~~i~~~l~~~l~~lH~~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~Dfg 161 (271)
T 3dtc_A 85 MEFARGGPLNRVLSG---KRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFG 161 (271)
T ss_dssp EECCTTEEHHHHHTS---SCCCHHHHHHHHHHHHHHHHHHHHSSSSCCCCSCCSGGGEEESSCCSSSCCSSCCEEECCCC
T ss_pred EEcCCCCCHHHHhhc---CCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCchHHEEEecccccccccCcceEEccCC
Confidence 999999999999964 46899999999999999999999992222999999999999986 6789999999
Q ss_pred cceecCCCCCccccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcC
Q 045553 948 LARLLGTSETHATTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQG 1027 (1082)
Q Consensus 948 la~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 1027 (1082)
.++....... ....|++.|+|||++.+..++.++||||+|+++|||++|+.||... .............
T Consensus 162 ~~~~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~--------~~~~~~~~~~~~~ 230 (271)
T 3dtc_A 162 LAREWHRTTK---MSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGI--------DGLAVAYGVAMNK 230 (271)
T ss_dssp C----------------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTTS--------CHHHHHHHHHTSC
T ss_pred cccccccccc---cCCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCC--------CHHHHHHhhhcCC
Confidence 9986643322 2356899999999999999999999999999999999999999632 1122222222221
Q ss_pred CCccccccccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhh
Q 045553 1028 RPCEFFTAGLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQLKQI 1077 (1082)
Q Consensus 1028 ~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L~~i 1077 (1082)
. ....+...+..+.+++.+|++.+|++||++.|++++|+++
T Consensus 231 ~---------~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~L~~l 271 (271)
T 3dtc_A 231 L---------ALPIPSTCPEPFAKLMEDCWNPDPHSRPSFTNILDQLTTI 271 (271)
T ss_dssp C---------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHC-
T ss_pred C---------CCCCCcccCHHHHHHHHHHhcCCcccCcCHHHHHHHHhcC
Confidence 1 1122344556899999999999999999999999999875
No 85
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain, alternative splicing, ATP-binding, disease MU kinase, metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Probab=100.00 E-value=9.3e-38 Score=349.08 Aligned_cols=261 Identities=26% Similarity=0.396 Sum_probs=206.1
Q ss_pred hcCccccceecccCceEEEEEEEcCCeEEEEEEeecCc--cccHHHHHHHHHHHhccCCCceeeEeeeeccCCeEEEEEe
Q 045553 800 TAGFNVQNCIGSGGFGATYKAEIIPGVVVAVKRLSVGR--FQGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFLIYN 877 (1082)
Q Consensus 800 ~~~~~~~~~lg~G~~g~Vy~a~~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~E 877 (1082)
..+|++.+.||+|+||.||+|+.. ..+|+|+++... ....+.+.+|++++++++||||+++++++. .+..++|||
T Consensus 35 ~~~~~~~~~lG~G~~g~Vy~~~~~--~~~avk~~k~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-~~~~~lv~e 111 (307)
T 3lb7_A 35 ASEVMLSTRIGSGSFGTVYKGKWH--GDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMT-KDNLAIVTQ 111 (307)
T ss_dssp TTSCCEEEEEEECSSCEEEEEESS--SEEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEEE
T ss_pred ccceEEEeEecCCCCeEEEEEEEC--CEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEc-cCcEEEEEe
Confidence 357899999999999999999754 468999887543 334577899999999999999999999875 456899999
Q ss_pred ecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCCC-C
Q 045553 878 YLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGTS-E 956 (1082)
Q Consensus 878 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~-~ 956 (1082)
|+++++|.+++... ...+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++..... .
T Consensus 112 ~~~~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~DFg~a~~~~~~~~ 187 (307)
T 3lb7_A 112 WCEGSSLYKHLHVQ-ETKFQMFQLIDIARQTAQGMDYLHAK---NIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSG 187 (307)
T ss_dssp CCSSCBHHHHHHTS-CCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCSSSEEECTTSCEEECCCCSSCC------
T ss_pred cCCCCcHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHhC---CEeeCCCChhhEEEcCCCCEEEccCCCceecccccc
Confidence 99999999999865 45799999999999999999999999 9999999999999999999999999999865432 2
Q ss_pred CccccCcccCCCcccchhcc---cCCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCCCcccc
Q 045553 957 THATTDVAGTFGYVAPEYAM---TCRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQGRPCEFF 1033 (1082)
Q Consensus 957 ~~~~~~~~gt~~y~aPE~~~---~~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1033 (1082)
........||+.|+|||++. +..++.++||||||+++|||++|+.||.... ..... ......+.....+
T Consensus 188 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~elltg~~Pf~~~~-------~~~~~-~~~~~~~~~~~~~ 259 (307)
T 3lb7_A 188 SQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHIN-------NRDQI-IFMVGRGYASPDL 259 (307)
T ss_dssp ------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCC-------CHHHH-HHHHHHTCCCCCS
T ss_pred cccccCCCCCcceECcceeeccCCCCCCchhhHHHHHHHHHHHHhCCCCCccCC-------cHHHH-HHHHhcCCCCcch
Confidence 22334457999999999986 6678999999999999999999999997421 11122 2222222111111
Q ss_pred ccccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhhCCC
Q 045553 1034 TAGLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQLKQIQPP 1080 (1082)
Q Consensus 1034 d~~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L~~i~~~ 1080 (1082)
. ......+..+.+++.+|++.+|++||++.||++.|+.++..
T Consensus 260 ~-----~~~~~~~~~l~~li~~~l~~~p~~RPs~~~il~~l~~l~~~ 301 (307)
T 3lb7_A 260 S-----KLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQHS 301 (307)
T ss_dssp T-----TSCSSSCHHHHHHHHHHSCSSSTTSCCHHHHHHHHHHHHTT
T ss_pred h-----hhhcCCcHHHHHHHHHHhhCChhhCcCHHHHHHHHHHHHhh
Confidence 0 11224456899999999999999999999999999988654
No 86
>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*
Probab=100.00 E-value=1.1e-37 Score=349.24 Aligned_cols=263 Identities=25% Similarity=0.352 Sum_probs=206.7
Q ss_pred hcCccccceecccCceEEEEEEEcCCeEEEEEEeecCcc--ccHHHHHHHHHHHhccCCCceeeEeeeeccCCeEEEEEe
Q 045553 800 TAGFNVQNCIGSGGFGATYKAEIIPGVVVAVKRLSVGRF--QGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFLIYN 877 (1082)
Q Consensus 800 ~~~~~~~~~lg~G~~g~Vy~a~~~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~E 877 (1082)
.++|++.+.||+|+||+||+|+..+|+.||+|++..... ...+.+.+|++++++++||||+++++++.+....++|||
T Consensus 20 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 99 (311)
T 3niz_A 20 MEKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTLVFE 99 (311)
T ss_dssp SCEEEEEEEEEECSSCEEEEEEETTSCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSSCEEEEEE
T ss_pred HhhhHhhhhccCCCCeEEEEEEECCCCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEEccCCEEEEEEc
Confidence 467999999999999999999988899999999965432 234678899999999999999999999999999999999
Q ss_pred ecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCCCCC
Q 045553 878 YLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGTSET 957 (1082)
Q Consensus 878 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~ 957 (1082)
|++ ++|.+++... ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.......
T Consensus 100 ~~~-~~l~~~~~~~-~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~ 174 (311)
T 3niz_A 100 FME-KDLKKVLDEN-KTGLQDSQIKIYLYQLLRGVAHCHQH---RILHRDLKPQNLLINSDGALKLADFGLARAFGIPVR 174 (311)
T ss_dssp CCS-EEHHHHHHTC-TTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEETTSCCC
T ss_pred CCC-CCHHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCchHhEEECCCCCEEEccCcCceecCCCcc
Confidence 996 5888888765 45689999999999999999999999 999999999999999999999999999987753322
Q ss_pred ccccCcccCCCcccchhccc-CCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCCCcccccc-
Q 045553 958 HATTDVAGTFGYVAPEYAMT-CRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQGRPCEFFTA- 1035 (1082)
Q Consensus 958 ~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~- 1035 (1082)
......||+.|+|||++.+ ..++.++||||+||++|||++|+.||..... ......+..........++...
T Consensus 175 -~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~-----~~~~~~i~~~~~~~~~~~~~~~~ 248 (311)
T 3niz_A 175 -SYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTD-----DDQLPKIFSILGTPNPREWPQVQ 248 (311)
T ss_dssp ----CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSST-----TTHHHHHHHHHCCCCTTTSGGGT
T ss_pred -cccCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCCh-----HHHHHHHHHHHCCCChHHhhhhh
Confidence 2334578999999999876 5689999999999999999999999974321 2222222222222211111000
Q ss_pred --------cc--CCC-----CChHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 045553 1036 --------GL--WDC-----GPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQ 1073 (1082)
Q Consensus 1036 --------~l--~~~-----~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~ 1073 (1082)
.. ... .......++.+++.+|++.||++|||+.|++++
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 301 (311)
T 3niz_A 249 ELPLWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNH 301 (311)
T ss_dssp TSHHHHSCCCCCCCCCCHHHHSTTCCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred ccchhhhcccccccCCcHHHhCcccCHHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence 00 000 011234678999999999999999999999873
No 87
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...
Probab=100.00 E-value=3.1e-38 Score=356.54 Aligned_cols=256 Identities=25% Similarity=0.442 Sum_probs=204.5
Q ss_pred hcCccccceecccCceEEEEEEEc-CCe----EEEEEEeecCc-cccHHHHHHHHHHHhccCCCceeeEeeeeccCCeEE
Q 045553 800 TAGFNVQNCIGSGGFGATYKAEII-PGV----VVAVKRLSVGR-FQGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMF 873 (1082)
Q Consensus 800 ~~~~~~~~~lg~G~~g~Vy~a~~~-~~~----~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 873 (1082)
..+|++.++||+|+||+||+|... +++ +||+|.+.... ....+.+.+|+.++++++||||+++++++.+.. .+
T Consensus 14 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-~~ 92 (327)
T 3poz_A 14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQ 92 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC-------CHHHHHHHHHHHHHCCBTTBCCEEEEEESSS-EE
T ss_pred HHHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCC-eE
Confidence 356999999999999999999754 343 46888875432 345678999999999999999999999998754 78
Q ss_pred EEEeecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecC
Q 045553 874 LIYNYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLG 953 (1082)
Q Consensus 874 lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~ 953 (1082)
+||||+++|+|.+++... ...+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++...
T Consensus 93 ~v~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~ 168 (327)
T 3poz_A 93 LITQLMPFGCLLDYVREH-KDNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLG 168 (327)
T ss_dssp EEEECCTTCBHHHHHHHS-TTSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEETTEEEECCTTHHHHHT
T ss_pred EEEEecCCCcHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCChheEEECCCCCEEEccCcceeEcc
Confidence 999999999999999876 45799999999999999999999999 99999999999999999999999999998775
Q ss_pred CCCCc-cccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCccCCCCCccHHHHHHHHHhcCCCcc
Q 045553 954 TSETH-ATTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELIS-DKKALDPSFCSFGNGFNIVAWASMLLLQGRPCE 1031 (1082)
Q Consensus 954 ~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1031 (1082)
..... ......||..|+|||++.+..++.++|||||||++|||++ |+.||+.... .... ..+..+.
T Consensus 169 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~-----~~~~----~~~~~~~--- 236 (327)
T 3poz_A 169 AEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPA-----SEIS----SILEKGE--- 236 (327)
T ss_dssp TTCC-------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCG-----GGHH----HHHHTTC---
T ss_pred CCcccccccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCccCCCH-----HHHH----HHHHcCC---
Confidence 44332 2334457889999999999999999999999999999999 9999974321 1221 1222221
Q ss_pred ccccccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhhC
Q 045553 1032 FFTAGLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQLKQIQ 1078 (1082)
Q Consensus 1032 ~~d~~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L~~i~ 1078 (1082)
....+......+.+++.+||+.+|++||++.||+++|+.+.
T Consensus 237 ------~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l~~~~ 277 (327)
T 3poz_A 237 ------RLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMA 277 (327)
T ss_dssp ------CCCCCTTBCHHHHHHHHHHTCSCGGGSCCHHHHHHHHHHHH
T ss_pred ------CCCCCccCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHH
Confidence 11223445668999999999999999999999999998764
No 88
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...
Probab=100.00 E-value=8.7e-38 Score=344.70 Aligned_cols=256 Identities=25% Similarity=0.412 Sum_probs=213.9
Q ss_pred hcCccccceecccCceEEEEEEEcCCeEEEEEEeecCccccHHHHHHHHHHHhccCCCceeeEeeeeccCCeEEEEEeec
Q 045553 800 TAGFNVQNCIGSGGFGATYKAEIIPGVVVAVKRLSVGRFQGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFLIYNYL 879 (1082)
Q Consensus 800 ~~~~~~~~~lg~G~~g~Vy~a~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~~ 879 (1082)
.++|++.+.||+|+||.||+|...++..||||++.... ...+.+.+|++++++++||||+++++++. .+..++||||+
T Consensus 12 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e~~ 89 (279)
T 1qpc_A 12 RETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVVT-QEPIYIITEYM 89 (279)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSCEEEEECC
T ss_pred HHhhhheeeecCCCCeEEEEEEEcCCcEEEEEEecCCc-ccHHHHHHHHHHHHhCCCcCcceEEEEEc-CCCcEEEEecC
Confidence 45789999999999999999998888899999997553 34678999999999999999999999986 45689999999
Q ss_pred CCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCCCCCcc
Q 045553 880 PGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGTSETHA 959 (1082)
Q Consensus 880 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~ 959 (1082)
++++|.+++.......+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||.+..........
T Consensus 90 ~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~ 166 (279)
T 1qpc_A 90 ENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTA 166 (279)
T ss_dssp TTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCCTTCEECSSSCEEC
T ss_pred CCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHhhEEEcCCCCEEECCCcccccccCccccc
Confidence 999999999764334689999999999999999999999 99999999999999999999999999998876544333
Q ss_pred ccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCccCCCCCccHHHHHHHHHhcCCCccccccccC
Q 045553 960 TTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELIS-DKKALDPSFCSFGNGFNIVAWASMLLLQGRPCEFFTAGLW 1038 (1082)
Q Consensus 960 ~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 1038 (1082)
.....++..|+|||++.+..++.++||||||+++|||++ |+.||... ...+...... .+..
T Consensus 167 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~--------~~~~~~~~~~-~~~~--------- 228 (279)
T 1qpc_A 167 REGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGM--------TNPEVIQNLE-RGYR--------- 228 (279)
T ss_dssp CTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTC--------CHHHHHHHHH-TTCC---------
T ss_pred ccCCCCccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCccc--------CHHHHHHHHh-cccC---------
Confidence 444567889999999998899999999999999999999 89898632 1222222222 2211
Q ss_pred CCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhhC
Q 045553 1039 DCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQLKQIQ 1078 (1082)
Q Consensus 1039 ~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L~~i~ 1078 (1082)
...+...+.++.+++.+|++.+|++||++.++++.|+++.
T Consensus 229 ~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~ 268 (279)
T 1qpc_A 229 MVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFF 268 (279)
T ss_dssp CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred CCCcccccHHHHHHHHHHhccChhhCCCHHHHHHHHHHHH
Confidence 1122344568999999999999999999999999998763
No 89
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Probab=100.00 E-value=3.7e-38 Score=361.46 Aligned_cols=258 Identities=23% Similarity=0.360 Sum_probs=211.9
Q ss_pred hcCccccceecccCceEEEEEEEc------CCeEEEEEEeecC-ccccHHHHHHHHHHHhccCCCceeeEeeeeccCCeE
Q 045553 800 TAGFNVQNCIGSGGFGATYKAEII------PGVVVAVKRLSVG-RFQGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEM 872 (1082)
Q Consensus 800 ~~~~~~~~~lg~G~~g~Vy~a~~~------~~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~ 872 (1082)
.++|++.+.||+|+||+||+|.+. ++..||||++... .......+.+|+.++++++||||+++++++.+....
T Consensus 70 ~~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~ 149 (367)
T 3l9p_A 70 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPR 149 (367)
T ss_dssp GGGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred HhHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCC
Confidence 457899999999999999999743 4678999999654 234456788999999999999999999999999999
Q ss_pred EEEEeecCCCCHHHHHhhCC-----CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCC---cEEEe
Q 045553 873 FLIYNYLPGGNLEKFIQDRP-----RRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNL---NAYLS 944 (1082)
Q Consensus 873 ~lV~E~~~~gsL~~~l~~~~-----~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~---~~kl~ 944 (1082)
++||||+++|+|.++++... ...+++..++.++.|++.||+|||+. +|+||||||+||+++.++ .+||+
T Consensus 150 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~~~~kL~ 226 (367)
T 3l9p_A 150 FILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIG 226 (367)
T ss_dssp EEEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSSTTCCEEEC
T ss_pred EEEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChhhEEEecCCCCceEEEC
Confidence 99999999999999998643 24689999999999999999999999 999999999999999555 59999
Q ss_pred ecccceecCCCC-CccccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCccCCCCCccHHHHHHH
Q 045553 945 DFGLARLLGTSE-THATTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELIS-DKKALDPSFCSFGNGFNIVAWASM 1022 (1082)
Q Consensus 945 DfGla~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~ellt-g~~p~~~~~~~~~~~~~~~~~~~~ 1022 (1082)
|||+++...... ........||+.|+|||++.+..++.++|||||||++|||++ |+.||... ...+....
T Consensus 227 DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~pf~~~--------~~~~~~~~ 298 (367)
T 3l9p_A 227 DFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSK--------SNQEVLEF 298 (367)
T ss_dssp CCHHHHHHHHHSSCTTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTC--------CHHHHHHH
T ss_pred CCccccccccccccccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC--------CHHHHHHH
Confidence 999998653222 122334568899999999999999999999999999999998 99998632 22333333
Q ss_pred HHhcCCCccccccccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhhC
Q 045553 1023 LLLQGRPCEFFTAGLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQLKQIQ 1078 (1082)
Q Consensus 1023 ~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L~~i~ 1078 (1082)
...... . ..+...+..+.+++.+||+.+|++||++.||+++|+.+.
T Consensus 299 i~~~~~-~---------~~~~~~~~~l~~li~~~l~~dP~~Rps~~eil~~l~~~~ 344 (367)
T 3l9p_A 299 VTSGGR-M---------DPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCT 344 (367)
T ss_dssp HHTTCC-C---------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred HHcCCC-C---------CCCccCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHh
Confidence 322221 1 123344567999999999999999999999999998764
No 90
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}
Probab=100.00 E-value=5.8e-38 Score=360.64 Aligned_cols=252 Identities=20% Similarity=0.323 Sum_probs=203.9
Q ss_pred hcCccccceecccCceEEEEEEEc-CCeEEEEEEeecCcc---ccHHHHHHHHHHHhcc-CCCceeeEeeeeccCCeEEE
Q 045553 800 TAGFNVQNCIGSGGFGATYKAEII-PGVVVAVKRLSVGRF---QGVQQFAAEIRTLGRV-QHPNLVTLIGYHVSEAEMFL 874 (1082)
Q Consensus 800 ~~~~~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~l 874 (1082)
.++|++.++||+|+||+||+|+.. +++.||||+++.... ...+.+.+|..+++++ +||||+++++++.+.+..++
T Consensus 51 ~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~l 130 (396)
T 4dc2_A 51 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFF 130 (396)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEE
T ss_pred hhHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCEEEE
Confidence 457999999999999999999765 588999999975432 2234578899998877 89999999999999999999
Q ss_pred EEeecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCC
Q 045553 875 IYNYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGT 954 (1082)
Q Consensus 875 V~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~ 954 (1082)
||||+++|+|..++... ..+++..+..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+++....
T Consensus 131 V~E~~~gg~L~~~l~~~--~~l~~~~~~~~~~qi~~aL~~LH~~---givHrDLKp~NILl~~~g~ikL~DFGla~~~~~ 205 (396)
T 4dc2_A 131 VIEYVNGGDLMFHMQRQ--RKLPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLR 205 (396)
T ss_dssp EEECCTTCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCCCC
T ss_pred EEEcCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC---CEEeccCCHHHEEECCCCCEEEeecceeeeccc
Confidence 99999999999999874 4699999999999999999999999 999999999999999999999999999986332
Q ss_pred CCCccccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCCCccccc
Q 045553 955 SETHATTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQGRPCEFFT 1034 (1082)
Q Consensus 955 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 1034 (1082)
. .......+||+.|+|||++.+..++.++||||+||++|||++|+.||................+...+..+..
T Consensus 206 ~-~~~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~~----- 279 (396)
T 4dc2_A 206 P-GDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQI----- 279 (396)
T ss_dssp T-TCCBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTTTTC------CCHHHHHHHHHHCCC-----
T ss_pred C-CCccccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCcccccccccchhhHHHHHHHHhcccc-----
Confidence 2 2234456899999999999999999999999999999999999999964322211111222333333333221
Q ss_pred cccCCCCChHHHHHHHHHHHHcccCCCCCCCCH
Q 045553 1035 AGLWDCGPHDDLIEMLNLAIMCTGESLSSRPSM 1067 (1082)
Q Consensus 1035 ~~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~ 1067 (1082)
..|...+.++.+++.+|++.||++||++
T Consensus 280 -----~~p~~~s~~~~~li~~lL~~dP~~R~~~ 307 (396)
T 4dc2_A 280 -----RIPRSLSVKAASVLKSFLNKDPKERLGC 307 (396)
T ss_dssp -----CCCTTSCHHHHHHHHHHTCSCTTTSTTC
T ss_pred -----CCCCcCCHHHHHHHHHHhcCCHhHcCCC
Confidence 1234455689999999999999999985
No 91
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}
Probab=100.00 E-value=2.8e-37 Score=347.63 Aligned_cols=270 Identities=18% Similarity=0.218 Sum_probs=216.2
Q ss_pred hcCccccceecccCceEEEEEEEc-CCeEEEEEEeecCc-cccHHHHHHHHHHHhccCCCceeeEeeeeccCC--eEEEE
Q 045553 800 TAGFNVQNCIGSGGFGATYKAEII-PGVVVAVKRLSVGR-FQGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEA--EMFLI 875 (1082)
Q Consensus 800 ~~~~~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~--~~~lV 875 (1082)
.++|++.+.||+|+||+||+|... +++.||||++.... ....+.+.+|++++++++||||+++++++.... ..++|
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv 87 (319)
T 4euu_A 8 NHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLI 87 (319)
T ss_dssp SEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEE
T ss_pred CCCEEEEEEecCCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCcceEEEEeecCCCceEEEE
Confidence 357999999999999999999765 48999999997543 344677889999999999999999999987654 78999
Q ss_pred EeecCCCCHHHHHhhCC-CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEE----cCCCcEEEeecccce
Q 045553 876 YNYLPGGNLEKFIQDRP-RRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILL----DNNLNAYLSDFGLAR 950 (1082)
Q Consensus 876 ~E~~~~gsL~~~l~~~~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill----~~~~~~kl~DfGla~ 950 (1082)
|||+++++|.+++.... ...+++..++.++.|++.||+|||+. +|+||||||+||++ +.++.+||+|||+++
T Consensus 88 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~a~ 164 (319)
T 4euu_A 88 MEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLREN---GIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAAR 164 (319)
T ss_dssp EECCTTCBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEECTTSCEEEEECCCTTCE
T ss_pred EeCCCCCCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEEeccCCCCceEEEccCCCce
Confidence 99999999999998653 23499999999999999999999999 99999999999999 788889999999998
Q ss_pred ecCCCCCccccCcccCCCcccchhcc--------cCCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHH
Q 045553 951 LLGTSETHATTDVAGTFGYVAPEYAM--------TCRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASM 1022 (1082)
Q Consensus 951 ~~~~~~~~~~~~~~gt~~y~aPE~~~--------~~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~ 1022 (1082)
....... .....||+.|+|||++. +..++.++|||||||++|||++|+.||..... .....+.+..
T Consensus 165 ~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~----~~~~~~~~~~ 238 (319)
T 4euu_A 165 ELEDDEQ--FVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEG----PRRNKEVMYK 238 (319)
T ss_dssp ECCTTCC--BCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTC----GGGCHHHHHH
T ss_pred ecCCCCc--eeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCc----cchhHHHHHH
Confidence 7754332 23457999999999986 57789999999999999999999999974322 1222333333
Q ss_pred HHhcCCCccc--c------------ccccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhhC
Q 045553 1023 LLLQGRPCEF--F------------TAGLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQLKQIQ 1078 (1082)
Q Consensus 1023 ~~~~~~~~~~--~------------d~~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L~~i~ 1078 (1082)
.......... + +.......+......+..++.+|++.||++||++.|++++..+..
T Consensus 239 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R~s~~ell~h~~d~~ 308 (319)
T 4euu_A 239 IITGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDIL 308 (319)
T ss_dssp HHHHCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHT
T ss_pred HhcCCCcccchhhhcccCCccccCccCCcccccchhHHHHhHHHHHHhccCChhhhccHHHhhhccHHHh
Confidence 3332211100 0 001111234677888999999999999999999999999987653
No 92
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=5.8e-38 Score=352.79 Aligned_cols=252 Identities=19% Similarity=0.245 Sum_probs=210.0
Q ss_pred hcCccccceecccCceEEEEEEEc-CCeEEEEEEeecCccccHHHHHHHHHHHhccCCCceeeEeeeeccCCeEEEEEee
Q 045553 800 TAGFNVQNCIGSGGFGATYKAEII-PGVVVAVKRLSVGRFQGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFLIYNY 878 (1082)
Q Consensus 800 ~~~~~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~ 878 (1082)
.++|++.+.||+|+||.||+|... +++.||+|.+.... .....+.+|+++++.++||||+++++++.+.+..++||||
T Consensus 4 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~-~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~ 82 (321)
T 1tki_A 4 YEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKG-TDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFEF 82 (321)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCT-HHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEECC
T ss_pred hhceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecCc-ccHHHHHHHHHHHHhCCCCCCCeEeEEEecCCEEEEEEEe
Confidence 468999999999999999999755 58999999987543 3456788999999999999999999999999999999999
Q ss_pred cCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcC--CCcEEEeecccceecCCCC
Q 045553 879 LPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDN--NLNAYLSDFGLARLLGTSE 956 (1082)
Q Consensus 879 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~--~~~~kl~DfGla~~~~~~~ 956 (1082)
+++|+|.+++... ...+++..+..++.|++.||+|||+. +|+||||||+||+++. ++.+||+|||+++.+....
T Consensus 83 ~~g~~L~~~l~~~-~~~~~~~~~~~i~~qi~~al~~lH~~---givH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~~~~~ 158 (321)
T 1tki_A 83 ISGLDIFERINTS-AFELNEREIVSYVHQVCEALQFLHSH---NIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGD 158 (321)
T ss_dssp CCCCBHHHHHTSS-SCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSCCCEEECCCTTCEECCTTC
T ss_pred CCCCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHC---CCCcCCCCHHHEEEccCCCCCEEEEECCCCeECCCCC
Confidence 9999999999764 34689999999999999999999999 9999999999999987 7899999999998875433
Q ss_pred CccccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCCCccccccc
Q 045553 957 THATTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQGRPCEFFTAG 1036 (1082)
Q Consensus 957 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 1036 (1082)
. .....||+.|+|||++.+..++.++||||+||++|||++|+.||... ...+............ +..
T Consensus 159 ~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~--------~~~~~~~~i~~~~~~~---~~~ 225 (321)
T 1tki_A 159 N--FRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAE--------TNQQIIENIMNAEYTF---DEE 225 (321)
T ss_dssp E--EEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCS--------SHHHHHHHHHHTCCCC---CHH
T ss_pred c--cccccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcCC--------CHHHHHHHHHcCCCCC---Chh
Confidence 2 33457899999999999988999999999999999999999999632 2233333333322111 000
Q ss_pred cCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 045553 1037 LWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQ 1073 (1082)
Q Consensus 1037 l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~ 1073 (1082)
.. ...+.++.+++.+|++.||++|||+.|++++
T Consensus 226 ~~----~~~s~~~~~li~~~L~~dp~~Rpt~~e~l~h 258 (321)
T 1tki_A 226 AF----KEISIEAMDFVDRLLVKERKSRMTASEALQH 258 (321)
T ss_dssp HH----TTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred hh----ccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 00 1235678999999999999999999999874
No 93
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7
Probab=100.00 E-value=1.7e-37 Score=356.84 Aligned_cols=253 Identities=21% Similarity=0.261 Sum_probs=211.3
Q ss_pred hcCccccceecccCceEEEEEEEc-CCeEEEEEEeecCccccHHHHHHHHHHHhccCCCceeeEeeeeccCCeEEEEEee
Q 045553 800 TAGFNVQNCIGSGGFGATYKAEII-PGVVVAVKRLSVGRFQGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFLIYNY 878 (1082)
Q Consensus 800 ~~~~~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~ 878 (1082)
.++|++.+.||+|+||.||+|... +|+.||+|++..........+.+|++++++++||||+++++++.+....++||||
T Consensus 50 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~E~ 129 (387)
T 1kob_A 50 YDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEF 129 (387)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEEC
T ss_pred ccceEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccchhhHHHHHHHHHHHHhCCCcCCCeEEEEEEeCCEEEEEEEc
Confidence 457999999999999999999764 6899999999876655667889999999999999999999999999999999999
Q ss_pred cCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcC--CCcEEEeecccceecCCCC
Q 045553 879 LPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDN--NLNAYLSDFGLARLLGTSE 956 (1082)
Q Consensus 879 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~--~~~~kl~DfGla~~~~~~~ 956 (1082)
+++|+|.+++... ...+++..+..++.|++.||+|||+. +|+||||||+||+++. ++.+||+|||+++......
T Consensus 130 ~~gg~L~~~l~~~-~~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~~vkL~DFG~a~~~~~~~ 205 (387)
T 1kob_A 130 LSGGELFDRIAAE-DYKMSEAEVINYMRQACEGLKHMHEH---SIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDE 205 (387)
T ss_dssp CCCCBHHHHTTCT-TCCBCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSTTCCCEEECCCTTCEECCTTS
T ss_pred CCCCcHHHHHHhh-cCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccchHHeEEecCCCCceEEEecccceecCCCc
Confidence 9999999999764 34689999999999999999999999 9999999999999974 5789999999998875433
Q ss_pred CccccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCCCccccccc
Q 045553 957 THATTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQGRPCEFFTAG 1036 (1082)
Q Consensus 957 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 1036 (1082)
. .....||+.|+|||++.+..++.++||||+||++|||++|+.||... ...+........... ++..
T Consensus 206 ~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~--------~~~~~~~~i~~~~~~---~~~~ 272 (387)
T 1kob_A 206 I--VKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGE--------DDLETLQNVKRCDWE---FDED 272 (387)
T ss_dssp C--EEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCS--------SHHHHHHHHHHCCCC---CCSS
T ss_pred c--eeeeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCCC--------CHHHHHHHHHhCCCC---CCcc
Confidence 2 23346999999999999999999999999999999999999999732 222333333322211 1111
Q ss_pred cCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 045553 1037 LWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQ 1073 (1082)
Q Consensus 1037 l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~ 1073 (1082)
.....+.++.+++.+|++.||++||++.|++++
T Consensus 273 ----~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~h 305 (387)
T 1kob_A 273 ----AFSSVSPEAKDFIKNLLQKEPRKRLTVHDALEH 305 (387)
T ss_dssp ----TTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred ----ccccCCHHHHHHHHHHcCCChhHCcCHHHHhhC
Confidence 112345689999999999999999999999874
No 94
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*
Probab=100.00 E-value=2.5e-37 Score=344.49 Aligned_cols=261 Identities=16% Similarity=0.237 Sum_probs=211.5
Q ss_pred hcCccccceecccCceEEEEEEE-cCCeEEEEEEeecCccccHHHHHHHHHHHhcc-CCCceeeEeeeeccCCeEEEEEe
Q 045553 800 TAGFNVQNCIGSGGFGATYKAEI-IPGVVVAVKRLSVGRFQGVQQFAAEIRTLGRV-QHPNLVTLIGYHVSEAEMFLIYN 877 (1082)
Q Consensus 800 ~~~~~~~~~lg~G~~g~Vy~a~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lV~E 877 (1082)
.++|++.+.||+|+||.||+|.. .+++.||||++.... ..+.+.+|++.++++ +|+|++++++++.+....++|||
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~e 86 (298)
T 1csn_A 9 GVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS--DAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVID 86 (298)
T ss_dssp TTTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCT--TSCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEEE
T ss_pred ccceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCC--ccHHHHHHHHHHHHHhcCCCCCeEEeecCCCceeEEEEE
Confidence 45799999999999999999975 579999999986543 234578899999999 79999999999999999999999
Q ss_pred ecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCc-----EEEeecccceec
Q 045553 878 YLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLN-----AYLSDFGLARLL 952 (1082)
Q Consensus 878 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~-----~kl~DfGla~~~ 952 (1082)
|+ +++|.++++.. ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++. +||+|||+++..
T Consensus 87 ~~-~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~~~~ 161 (298)
T 1csn_A 87 LL-GPSLEDLLDLC-GRKFSVKTVAMAAKQMLARVQSIHEK---SLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFY 161 (298)
T ss_dssp CC-CCBHHHHHHHT-TTCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEES
T ss_pred ec-CCCHHHHHHHh-ccCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEeccCCCCCCCeEEEEECcccccc
Confidence 99 99999999875 34699999999999999999999999 9999999999999987776 999999999877
Q ss_pred CCCCCc------cccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhc
Q 045553 953 GTSETH------ATTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQ 1026 (1082)
Q Consensus 953 ~~~~~~------~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 1026 (1082)
...... ......||+.|+|||++.+..++.++||||||+++|||++|+.||...... ............
T Consensus 162 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~-----~~~~~~~~~~~~ 236 (298)
T 1csn_A 162 RDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAA-----TNKQKYERIGEK 236 (298)
T ss_dssp BCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSC-----CHHHHHHHHHHH
T ss_pred ccccccccccccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcchhhcc-----ccHHHHHHHHhh
Confidence 544321 234567999999999999999999999999999999999999999753211 112222211111
Q ss_pred CCCccccccccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhhC
Q 045553 1027 GRPCEFFTAGLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQLKQIQ 1078 (1082)
Q Consensus 1027 ~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L~~i~ 1078 (1082)
...... +.. ....+.++.+++.+|++.+|++||++.+|++.|+++.
T Consensus 237 ~~~~~~--~~~----~~~~~~~l~~li~~~l~~dp~~RP~~~~l~~~l~~~~ 282 (298)
T 1csn_A 237 KQSTPL--REL----CAGFPEEFYKYMHYARNLAFDATPDYDYLQGLFSKVL 282 (298)
T ss_dssp HHHSCH--HHH----TTTSCHHHHHHHHHHHHCCTTCCCCHHHHHHHHHHHH
T ss_pred ccCccH--HHH----HhhCcHHHHHHHHHHhcCCcccCCCHHHHHHHHHHHH
Confidence 000000 000 1133468999999999999999999999999998864
No 95
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Probab=100.00 E-value=3.3e-38 Score=367.60 Aligned_cols=264 Identities=21% Similarity=0.283 Sum_probs=214.3
Q ss_pred cHHHHHHHhcCccccceecccCceEEEEEEEc-CCeEEEEEEeecCcc---ccHHHHHHHHHHHhccCCCceeeEeeeec
Q 045553 792 TYENVVRATAGFNVQNCIGSGGFGATYKAEII-PGVVVAVKRLSVGRF---QGVQQFAAEIRTLGRVQHPNLVTLIGYHV 867 (1082)
Q Consensus 792 ~~~~~~~~~~~~~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~niv~l~~~~~ 867 (1082)
.+.++....++|++.++||+|+||+||+|+.. +++.||||++..... .....+.+|..+++.++||||+++++++.
T Consensus 65 ~~~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~ 144 (437)
T 4aw2_A 65 KVKQMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQ 144 (437)
T ss_dssp HHHHHSCCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEE
T ss_pred hhhcccCChhheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEe
Confidence 45555566789999999999999999999766 478999999965321 22234889999999999999999999999
Q ss_pred cCCeEEEEEeecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecc
Q 045553 868 SEAEMFLIYNYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFG 947 (1082)
Q Consensus 868 ~~~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG 947 (1082)
+.+..|+||||+++|+|.++++.. ...+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||
T Consensus 145 ~~~~~~lV~Ey~~gg~L~~~l~~~-~~~l~e~~~~~~~~qi~~aL~~LH~~---giiHrDLKp~NILl~~~g~vkL~DFG 220 (437)
T 4aw2_A 145 DDNNLYLVMDYYVGGDLLTLLSKF-EDRLPEEMARFYLAEMVIAIDSVHQL---HYVHRDIKPDNILMDMNGHIRLADFG 220 (437)
T ss_dssp CSSEEEEEECCCTTCBHHHHHHTT-TTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCT
T ss_pred eCCEEEEEEecCCCCcHHHHHHHc-cCCCCHHHHHHHHHHHHHHHHHHHhC---CeEecccCHHHeeEcCCCCEEEcchh
Confidence 999999999999999999999864 35699999999999999999999999 99999999999999999999999999
Q ss_pred cceecCCCCCccccCcccCCCcccchhcc-----cCCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHH
Q 045553 948 LARLLGTSETHATTDVAGTFGYVAPEYAM-----TCRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASM 1022 (1082)
Q Consensus 948 la~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~ 1022 (1082)
+++.............+||+.|+|||++. ...++.++|||||||++|||++|+.||... +..+....
T Consensus 221 la~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~--------~~~~~~~~ 292 (437)
T 4aw2_A 221 SCLKLMEDGTVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAE--------SLVETYGK 292 (437)
T ss_dssp TCEECCTTSCEECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCS--------SHHHHHHH
T ss_pred hhhhcccCCCcccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCC--------ChhHHHHh
Confidence 99877655554455578999999999997 567899999999999999999999999742 22222222
Q ss_pred HHhcCCCccccccccCCCCChHHHHHHHHHHHHcccCCCCC--CCCHHHHHHH
Q 045553 1023 LLLQGRPCEFFTAGLWDCGPHDDLIEMLNLAIMCTGESLSS--RPSMRQVAQQ 1073 (1082)
Q Consensus 1023 ~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~p~~--RPt~~ev~~~ 1073 (1082)
+......... + ......+.++.+++.+|+..+|++ ||++.|++++
T Consensus 293 i~~~~~~~~~--p----~~~~~~s~~~~dLi~~lL~~~~~r~~r~~~~eil~H 339 (437)
T 4aw2_A 293 IMNHKERFQF--P----TQVTDVSENAKDLIRRLICSREHRLGQNGIEDFKKH 339 (437)
T ss_dssp HHTHHHHCCC--C----SSCCCSCHHHHHHHHTTSSCGGGCTTTTTTHHHHTS
T ss_pred hhhccccccC--C----cccccCCHHHHHHHHHHhcccccccCCCCHHHHhCC
Confidence 2211100000 0 011224567899999999998888 9999999864
No 96
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}
Probab=100.00 E-value=1.5e-37 Score=350.51 Aligned_cols=252 Identities=21% Similarity=0.289 Sum_probs=208.2
Q ss_pred hcCccccceecccCceEEEEEEEc-CCeEEEEEEeecCcc------ccHHHHHHHHHHHhccCCCceeeEeeeeccCCeE
Q 045553 800 TAGFNVQNCIGSGGFGATYKAEII-PGVVVAVKRLSVGRF------QGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEM 872 (1082)
Q Consensus 800 ~~~~~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~~------~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~ 872 (1082)
.++|++.+.||+|+||.||+|... +|+.||+|++..... ...+.+.+|++++++++||||+++++++.+....
T Consensus 10 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~ 89 (326)
T 2y0a_A 10 DDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDV 89 (326)
T ss_dssp HHHEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred ccceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEE
Confidence 356999999999999999999765 589999999975432 2467899999999999999999999999999999
Q ss_pred EEEEeecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCC----cEEEeeccc
Q 045553 873 FLIYNYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNL----NAYLSDFGL 948 (1082)
Q Consensus 873 ~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~----~~kl~DfGl 948 (1082)
++||||+++++|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++ .+||+|||+
T Consensus 90 ~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~ 164 (326)
T 2y0a_A 90 ILILELVAGGELFDFLAEK--ESLTEEEATEFLKQILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGL 164 (326)
T ss_dssp EEEEECCCSCBHHHHHTTS--SCCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESCSSSSSCCEEECCCTT
T ss_pred EEEEEcCCCCCHHHHHHhc--CCcCHHHHHHHHHHHHHHHHHHHHC---CeEcCCCCHHHEEEecCCCCCCCEEEEECCC
Confidence 9999999999999999763 5689999999999999999999999 999999999999999887 899999999
Q ss_pred ceecCCCCCccccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCC
Q 045553 949 ARLLGTSETHATTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQGR 1028 (1082)
Q Consensus 949 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 1028 (1082)
++...... ......||+.|+|||++.+..++.++||||+||++|||++|+.||... ...+..........
T Consensus 165 a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~--------~~~~~~~~~~~~~~ 234 (326)
T 2y0a_A 165 AHKIDFGN--EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGD--------TKQETLANVSAVNY 234 (326)
T ss_dssp CEECCTTS--CCCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCS--------SHHHHHHHHHHTCC
T ss_pred CeECCCCC--ccccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCCC--------CHHHHHHHHHhcCC
Confidence 98775332 233457999999999999999999999999999999999999999632 12222222222111
Q ss_pred CccccccccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 045553 1029 PCEFFTAGLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQ 1073 (1082)
Q Consensus 1029 ~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~ 1073 (1082)
. . ... .....+..+.+++.+|++.||++|||+.|++++
T Consensus 235 -~-~-~~~----~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 272 (326)
T 2y0a_A 235 -E-F-EDE----YFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQH 272 (326)
T ss_dssp -C-C-CHH----HHTTSCHHHHHHHHHHSCSSGGGSCCHHHHHHS
T ss_pred -C-c-Ccc----ccccCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 0 0 000 011234678999999999999999999999874
No 97
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Probab=100.00 E-value=1.6e-37 Score=351.33 Aligned_cols=260 Identities=18% Similarity=0.221 Sum_probs=211.5
Q ss_pred hcCccccceecccCceEEEEEEE-cCCeEEEEEEeecCccccHHHHHHHHHHHhcc-CCCceeeEeeeeccCCeEEEEEe
Q 045553 800 TAGFNVQNCIGSGGFGATYKAEI-IPGVVVAVKRLSVGRFQGVQQFAAEIRTLGRV-QHPNLVTLIGYHVSEAEMFLIYN 877 (1082)
Q Consensus 800 ~~~~~~~~~lg~G~~g~Vy~a~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lV~E 877 (1082)
..+|++.+.||+|+||.||+|.. .+++.||||++..... .+.+.+|+++++++ +||||+++++++...+..++|||
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e 85 (330)
T 2izr_A 8 GPNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSR--APQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAMVLE 85 (330)
T ss_dssp TTTEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTCS--SCCHHHHHHHHHHHCSCTTSCCEEEEEEETTEEEEEEE
T ss_pred cCCeEEEEEeeccCCceEEEEEECCCCcEEEEEEeccccc--hHHHHHHHHHHHHhhCCCCCCEEEEEEecCCccEEEEE
Confidence 46799999999999999999975 5789999999875432 24588999999999 99999999999999999999999
Q ss_pred ecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCc-----EEEeecccceec
Q 045553 878 YLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLN-----AYLSDFGLARLL 952 (1082)
Q Consensus 878 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~-----~kl~DfGla~~~ 952 (1082)
|+ +++|.+++... ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++. +||+|||+++.+
T Consensus 86 ~~-~~~L~~~~~~~-~~~~~~~~~~~i~~qi~~~l~~LH~~---~iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~a~~~ 160 (330)
T 2izr_A 86 LL-GPSLEDLFDLC-DRTFSLKTVLMIAIQLISRMEYVHSK---NLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEY 160 (330)
T ss_dssp CC-CCBHHHHHHHT-TTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECCGGGTCTTSEEECCCTTCEES
T ss_pred eC-CCCHHHHHHHc-CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeeeccCCCCCCceEEEEEcccceee
Confidence 99 99999999875 45799999999999999999999999 9999999999999998887 999999999976
Q ss_pred CCCCCc------cccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhc
Q 045553 953 GTSETH------ATTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQ 1026 (1082)
Q Consensus 953 ~~~~~~------~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 1026 (1082)
...... ......||+.|+|||++.+..++.++|||||||++|||++|+.||.... .....+........
T Consensus 161 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~~~-----~~~~~~~~~~i~~~ 235 (330)
T 2izr_A 161 IDPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLK-----ADTLKERYQKIGDT 235 (330)
T ss_dssp BCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTTCC-----CSSHHHHHHHHHHH
T ss_pred ecCCCCccccccccCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCccccc-----cccHHHHHHHHHhh
Confidence 543322 1245679999999999999999999999999999999999999997532 12232222222111
Q ss_pred CCCccccccccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhhC
Q 045553 1027 GRPCEFFTAGLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQLKQIQ 1078 (1082)
Q Consensus 1027 ~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L~~i~ 1078 (1082)
.... .. .... ...+ ++.+++.+|++.+|.+||++.+|.+.|+++.
T Consensus 236 ~~~~-~~-~~~~----~~~p-~~~~li~~~l~~~p~~RP~~~~l~~~l~~~~ 280 (330)
T 2izr_A 236 KRAT-PI-EVLC----ENFP-EMATYLRYVRRLDFFEKPDYDYLRKLFTDLF 280 (330)
T ss_dssp HHHS-CH-HHHT----TTCH-HHHHHHHHHHHCCTTCCCCHHHHHHHHHHHH
T ss_pred hccC-CH-HHHh----ccCh-HHHHHHHHHHhCCCCCCCCHHHHHHHHHHHH
Confidence 1000 00 0000 1123 8999999999999999999999999998753
No 98
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7
Probab=100.00 E-value=2.6e-37 Score=346.46 Aligned_cols=245 Identities=27% Similarity=0.389 Sum_probs=208.3
Q ss_pred cCccccceecccCceEEEEEEEc-CCeEEEEEEeecCc---cccHHHHHHHHHHHhccCCCceeeEeeeeccCCeEEEEE
Q 045553 801 AGFNVQNCIGSGGFGATYKAEII-PGVVVAVKRLSVGR---FQGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFLIY 876 (1082)
Q Consensus 801 ~~~~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 876 (1082)
++|++.+.||+|+||+||+|+.. +|+.||+|++.... ....+.+.+|..+++.++||||+++++++.+....++||
T Consensus 6 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv~ 85 (318)
T 1fot_A 6 QDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMIM 85 (318)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEEE
T ss_pred HHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCCEEEEEE
Confidence 56999999999999999999765 68999999997542 234567889999999999999999999999999999999
Q ss_pred eecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCCCC
Q 045553 877 NYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGTSE 956 (1082)
Q Consensus 877 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~ 956 (1082)
||+++|+|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.....
T Consensus 86 e~~~gg~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~Dfg~a~~~~~~- 159 (318)
T 1fot_A 86 DYIEGGELFSLLRKS--QRFPNPVAKFYAAEVCLALEYLHSK---DIIYRDLKPENILLDKNGHIKITDFGFAKYVPDV- 159 (318)
T ss_dssp CCCCSCBHHHHHHHT--SSCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEECTTSCEEECCCSSCEECSSC-
T ss_pred eCCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChheEEEcCCCCEEEeecCcceecCCc-
Confidence 999999999999874 4689999999999999999999999 9999999999999999999999999999876432
Q ss_pred CccccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCCCccccccc
Q 045553 957 THATTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQGRPCEFFTAG 1036 (1082)
Q Consensus 957 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 1036 (1082)
.....||+.|+|||++.+..++.++||||+||++|||++|+.||... +............ .
T Consensus 160 ---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~--------~~~~~~~~i~~~~-~------- 220 (318)
T 1fot_A 160 ---TYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDS--------NTMKTYEKILNAE-L------- 220 (318)
T ss_dssp ---BCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCS--------SHHHHHHHHHHCC-C-------
T ss_pred ---cccccCCccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCCC--------CHHHHHHHHHhCC-C-------
Confidence 23457999999999999999999999999999999999999999632 2233333333221 1
Q ss_pred cCCCCChHHHHHHHHHHHHcccCCCCCCC-----CHHHHHHH
Q 045553 1037 LWDCGPHDDLIEMLNLAIMCTGESLSSRP-----SMRQVAQQ 1073 (1082)
Q Consensus 1037 l~~~~~~~~~~~l~~li~~cl~~~p~~RP-----t~~ev~~~ 1073 (1082)
..+.....++.+++.+|++.||++|| ++.||.++
T Consensus 221 ---~~p~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~~i~~h 259 (318)
T 1fot_A 221 ---RFPPFFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKNH 259 (318)
T ss_dssp ---CCCTTSCHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHTS
T ss_pred ---CCCCCCCHHHHHHHHHHhccCHHHcCCCcCCCHHHHhcC
Confidence 12334456899999999999999999 88888753
No 99
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Probab=100.00 E-value=5e-38 Score=353.79 Aligned_cols=253 Identities=25% Similarity=0.320 Sum_probs=205.5
Q ss_pred hcCccccceecccCceEEEEEEEc-CCeEEEEEEeecCcc-ccHHHHHHHHHHHhccCCCceeeEeeeeccCCeEEEEEe
Q 045553 800 TAGFNVQNCIGSGGFGATYKAEII-PGVVVAVKRLSVGRF-QGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFLIYN 877 (1082)
Q Consensus 800 ~~~~~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~E 877 (1082)
.++|++.+.||+|+||+||+|... +++.||||++..... ...+.+.+|+.+++.++||||+++++++.+.+..++|||
T Consensus 6 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e 85 (323)
T 3tki_A 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLE 85 (323)
T ss_dssp TTCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred hhhceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccccchHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEEE
Confidence 468999999999999999999765 689999999875433 234668899999999999999999999999999999999
Q ss_pred ecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCCCCC
Q 045553 878 YLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGTSET 957 (1082)
Q Consensus 878 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~ 957 (1082)
|+++++|.+++.. ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.+.....
T Consensus 86 ~~~~~~L~~~l~~--~~~~~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~ 160 (323)
T 3tki_A 86 YCSGGELFDRIEP--DIGMPEPDAQRFFHQLMAGVVYLHGI---GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNR 160 (323)
T ss_dssp CCTTEEGGGGSBT--TTBCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTCEECEETTE
T ss_pred cCCCCcHHHHHhh--cCCCCHHHHHHHHHHHHHHHHHHHHC---CccccccchHHEEEeCCCCEEEEEeeccceeccCCc
Confidence 9999999999976 34699999999999999999999999 999999999999999999999999999987643322
Q ss_pred -ccccCcccCCCcccchhcccCCC-CchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCCCcccccc
Q 045553 958 -HATTDVAGTFGYVAPEYAMTCRV-SDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQGRPCEFFTA 1035 (1082)
Q Consensus 958 -~~~~~~~gt~~y~aPE~~~~~~~-~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 1035 (1082)
.......||+.|+|||++.+..+ +.++||||+||++|||++|+.||...... ......| .......
T Consensus 161 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~---~~~~~~~----~~~~~~~----- 228 (323)
T 3tki_A 161 ERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDS---CQEYSDW----KEKKTYL----- 228 (323)
T ss_dssp ECCBCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTT---SHHHHHH----HTTCTTS-----
T ss_pred ccccCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCchH---HHHHHHH----hcccccC-----
Confidence 23345679999999999988765 77999999999999999999999743211 1111111 1111100
Q ss_pred ccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 045553 1036 GLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQ 1073 (1082)
Q Consensus 1036 ~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~ 1073 (1082)
.........+.+++.+|++.||++|||+.|++++
T Consensus 229 ----~~~~~~~~~~~~li~~~L~~dP~~R~t~~eil~h 262 (323)
T 3tki_A 229 ----NPWKKIDSAPLALLHKILVENPSARITIPDIKKD 262 (323)
T ss_dssp ----TTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred ----CccccCCHHHHHHHHHHccCChhhCcCHHHHhhC
Confidence 1112345678899999999999999999999764
No 100
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*
Probab=100.00 E-value=2.2e-38 Score=366.21 Aligned_cols=260 Identities=22% Similarity=0.315 Sum_probs=212.5
Q ss_pred HHHHHHHhcCccccceecccCceEEEEEEEc-CCeEEEEEEeecCc---cccHHHHHHHHHHHhccCCCceeeEeeeecc
Q 045553 793 YENVVRATAGFNVQNCIGSGGFGATYKAEII-PGVVVAVKRLSVGR---FQGVQQFAAEIRTLGRVQHPNLVTLIGYHVS 868 (1082)
Q Consensus 793 ~~~~~~~~~~~~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~ 868 (1082)
..++....++|++.+.||+|+||+||+|+.. +++.||+|++.... ....+.+.+|+++++.++||||+++++++.+
T Consensus 61 ~~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~ 140 (410)
T 3v8s_A 61 IRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQD 140 (410)
T ss_dssp HHHHSCCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEEC
T ss_pred HHhcccCccccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEE
Confidence 3445556788999999999999999999765 58999999986421 1223457899999999999999999999999
Q ss_pred CCeEEEEEeecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeeccc
Q 045553 869 EAEMFLIYNYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGL 948 (1082)
Q Consensus 869 ~~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGl 948 (1082)
....|+||||+++|+|.++++.. .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 141 ~~~~~lV~E~~~gg~L~~~l~~~---~~~e~~~~~~~~qi~~aL~~LH~~---givHrDLKp~NILl~~~g~ikL~DFG~ 214 (410)
T 3v8s_A 141 DRYLYMVMEYMPGGDLVNLMSNY---DVPEKWARFYTAEVVLALDAIHSM---GFIHRDVKPDNMLLDKSGHLKLADFGT 214 (410)
T ss_dssp SSEEEEEECCCTTEEHHHHHHHC---CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTT
T ss_pred CCEEEEEEeCCCCCcHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeeECCCCCEEEeccce
Confidence 99999999999999999999864 589999999999999999999999 999999999999999999999999999
Q ss_pred ceecCCCCCccccCcccCCCcccchhcccCC----CCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHH
Q 045553 949 ARLLGTSETHATTDVAGTFGYVAPEYAMTCR----VSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLL 1024 (1082)
Q Consensus 949 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~----~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 1024 (1082)
++.............+||+.|+|||++.+.. ++.++|||||||++|||++|+.||... +.......+.
T Consensus 215 a~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~--------~~~~~~~~i~ 286 (410)
T 3v8s_A 215 CMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYAD--------SLVGTYSKIM 286 (410)
T ss_dssp CEECCTTSEEECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCS--------SHHHHHHHHH
T ss_pred eEeeccCCcccccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCC--------ChhhHHHHHH
Confidence 9887655444445678999999999998765 788999999999999999999999732 2223333332
Q ss_pred hcCCCccccccccCCCCChHHHHHHHHHHHHcccCCCCC--CCCHHHHHHH
Q 045553 1025 LQGRPCEFFTAGLWDCGPHDDLIEMLNLAIMCTGESLSS--RPSMRQVAQQ 1073 (1082)
Q Consensus 1025 ~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~p~~--RPt~~ev~~~ 1073 (1082)
........ ......+.++.+++.+|++.+|++ ||++.||.++
T Consensus 287 ~~~~~~~~-------p~~~~~s~~~~~li~~lL~~~~~rlgR~~~~ei~~H 330 (410)
T 3v8s_A 287 NHKNSLTF-------PDDNDISKEAKNLICAFLTDREVRLGRNGVEEIKRH 330 (410)
T ss_dssp THHHHCCC-------CTTCCCCHHHHHHHHHHSSCGGGCTTSSCHHHHHTS
T ss_pred hccccccC-------CCcccccHHHHHHHHHHccChhhhCCCCCHHHHhcC
Confidence 21100000 011134568999999999999998 9999999875
No 101
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}
Probab=100.00 E-value=5.3e-38 Score=356.99 Aligned_cols=248 Identities=24% Similarity=0.337 Sum_probs=203.7
Q ss_pred hcCccccceecccCceEEEEEEEc-CCeEEEEEEeecC---ccccHHHHHHHHHHHhcc-CCCceeeEeeeeccCCeEEE
Q 045553 800 TAGFNVQNCIGSGGFGATYKAEII-PGVVVAVKRLSVG---RFQGVQQFAAEIRTLGRV-QHPNLVTLIGYHVSEAEMFL 874 (1082)
Q Consensus 800 ~~~~~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~l 874 (1082)
.++|++.+.||+|+||+||+|+.. +++.||||++... .....+.+.+|.++++.+ +||||+++++++.+.+..|+
T Consensus 22 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~l 101 (353)
T 3txo_A 22 IDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRLFF 101 (353)
T ss_dssp -CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEE
T ss_pred hhheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCCEEEE
Confidence 467999999999999999999765 5899999999754 223456688899999988 79999999999999999999
Q ss_pred EEeecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCC
Q 045553 875 IYNYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGT 954 (1082)
Q Consensus 875 V~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~ 954 (1082)
||||+++|+|.++++.. ..+++..+..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+++....
T Consensus 102 v~E~~~gg~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NILl~~~g~ikL~DFG~a~~~~~ 176 (353)
T 3txo_A 102 VMEFVNGGDLMFHIQKS--RRFDEARARFYAAEIISALMFLHDK---GIIYRDLKLDNVLLDHEGHCKLADFGMCKEGIC 176 (353)
T ss_dssp EEECCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCSCC
T ss_pred EEeCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC---CCcccCCCHHHEEECCCCCEEEccccceeeccc
Confidence 99999999999999874 4699999999999999999999999 999999999999999999999999999985432
Q ss_pred CCCccccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCCCccccc
Q 045553 955 SETHATTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQGRPCEFFT 1034 (1082)
Q Consensus 955 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 1034 (1082)
. .......+||+.|+|||++.+..++.++||||+||++|||++|+.||... +..+....+.... .
T Consensus 177 ~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~--------~~~~~~~~i~~~~-~----- 241 (353)
T 3txo_A 177 N-GVTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAE--------NEDDLFEAILNDE-V----- 241 (353)
T ss_dssp ----------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCCS--------SHHHHHHHHHHCC-C-----
T ss_pred C-CccccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCCC--------CHHHHHHHHHcCC-C-----
Confidence 2 22334567999999999999989999999999999999999999999732 2233333333221 1
Q ss_pred cccCCCCChHHHHHHHHHHHHcccCCCCCCCCH------HHHHH
Q 045553 1035 AGLWDCGPHDDLIEMLNLAIMCTGESLSSRPSM------RQVAQ 1072 (1082)
Q Consensus 1035 ~~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~------~ev~~ 1072 (1082)
..+......+.+++.+|++.+|++||++ .|+++
T Consensus 242 -----~~p~~~~~~~~~li~~lL~~dP~~R~~~~~~~~~~~il~ 280 (353)
T 3txo_A 242 -----VYPTWLHEDATGILKSFMTKNPTMRLGSLTQGGEHAILR 280 (353)
T ss_dssp -----CCCTTSCHHHHHHHHHHTCSSGGGSTTSGGGTCTHHHHT
T ss_pred -----CCCCCCCHHHHHHHHHHhhhCHHHccCCcccCCHHHHhh
Confidence 1233445678999999999999999998 66654
No 102
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.7e-37 Score=353.48 Aligned_cols=262 Identities=23% Similarity=0.335 Sum_probs=212.7
Q ss_pred HhcCccccceecccCceEEEEEEE------cCCeEEEEEEeecCc-cccHHHHHHHHHHHhcc-CCCceeeEeeeeccCC
Q 045553 799 ATAGFNVQNCIGSGGFGATYKAEI------IPGVVVAVKRLSVGR-FQGVQQFAAEIRTLGRV-QHPNLVTLIGYHVSEA 870 (1082)
Q Consensus 799 ~~~~~~~~~~lg~G~~g~Vy~a~~------~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~ 870 (1082)
..++|++.+.||+|+||.||+|.. .++..||||++.... ....+.+.+|+++++++ +||||+++++++...+
T Consensus 43 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~ 122 (344)
T 1rjb_A 43 PRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSG 122 (344)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred CHHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEeeCC
Confidence 456799999999999999999975 246789999997542 23456789999999999 8999999999999999
Q ss_pred eEEEEEeecCCCCHHHHHhhCCC---------------------CCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCC
Q 045553 871 EMFLIYNYLPGGNLEKFIQDRPR---------------------RTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIK 929 (1082)
Q Consensus 871 ~~~lV~E~~~~gsL~~~l~~~~~---------------------~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk 929 (1082)
..++||||+++|+|.+++..... ..+++..++.++.|++.||+|||+. +|+|||||
T Consensus 123 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dik 199 (344)
T 1rjb_A 123 PIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFK---SCVHRDLA 199 (344)
T ss_dssp SCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHT---TEEETTCS
T ss_pred ccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCC
Confidence 99999999999999999987532 2479999999999999999999999 99999999
Q ss_pred CCCEEEcCCCcEEEeecccceecCCCCCc-cccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCc
Q 045553 930 PSNILLDNNLNAYLSDFGLARLLGTSETH-ATTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELIS-DKKALDPSF 1007 (1082)
Q Consensus 930 ~~Nill~~~~~~kl~DfGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~ellt-g~~p~~~~~ 1007 (1082)
|+||+++.++.+||+|||++......... ......||+.|+|||++.+..++.++||||||+++|||++ |+.||....
T Consensus 200 p~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~ 279 (344)
T 1rjb_A 200 ARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIP 279 (344)
T ss_dssp GGGEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCC
T ss_pred hhhEEEcCCCcEEeCCCccCcccccCccceeccCccCccCccCHHHhccCCCChhHhHHHHHHHHHHHHcCCCCCcccCC
Confidence 99999999999999999999876543332 2334567889999999999999999999999999999998 999997432
Q ss_pred cCCCCCccHHHHHHHHHhcCCCccccccccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhhCCC
Q 045553 1008 CSFGNGFNIVAWASMLLLQGRPCEFFTAGLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQLKQIQPP 1080 (1082)
Q Consensus 1008 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L~~i~~~ 1080 (1082)
.. ..+......+.. ...+...+.++.+++.+||+.||++||++.||+++|+.+...
T Consensus 280 ~~--------~~~~~~~~~~~~---------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~ 335 (344)
T 1rjb_A 280 VD--------ANFYKLIQNGFK---------MDQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFLGCQLAD 335 (344)
T ss_dssp CS--------HHHHHHHHTTCC---------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC--
T ss_pred cH--------HHHHHHHhcCCC---------CCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHHH
Confidence 11 112222222211 112334456899999999999999999999999999987654
No 103
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Probab=100.00 E-value=2.3e-37 Score=347.42 Aligned_cols=259 Identities=24% Similarity=0.388 Sum_probs=214.8
Q ss_pred hcCccccceecccCceEEEEEEE------cCCeEEEEEEeecCcc-ccHHHHHHHHHHHhcc-CCCceeeEeeeeccCCe
Q 045553 800 TAGFNVQNCIGSGGFGATYKAEI------IPGVVVAVKRLSVGRF-QGVQQFAAEIRTLGRV-QHPNLVTLIGYHVSEAE 871 (1082)
Q Consensus 800 ~~~~~~~~~lg~G~~g~Vy~a~~------~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~ 871 (1082)
.++|++.+.||+|+||.||+|+. .+++.||||++..... ...+.+.+|+++++++ +||||+++++++.+.+.
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~ 101 (313)
T 1t46_A 22 RNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGP 101 (313)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS
T ss_pred hhhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhHHHHHHHHHHHHHHhhcccCCCeeeEEEEEecCCC
Confidence 45799999999999999999975 3468999999975533 3457789999999999 99999999999999999
Q ss_pred EEEEEeecCCCCHHHHHhhCCC----------------CCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEE
Q 045553 872 MFLIYNYLPGGNLEKFIQDRPR----------------RTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILL 935 (1082)
Q Consensus 872 ~~lV~E~~~~gsL~~~l~~~~~----------------~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill 935 (1082)
.++||||+++|+|.+++..... ..+++..++.++.|++.||+|||+. +|+||||||+||++
T Consensus 102 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~ 178 (313)
T 1t46_A 102 TLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASK---NCIHRDLAARNILL 178 (313)
T ss_dssp CEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEE
T ss_pred cEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCccceEEE
Confidence 9999999999999999987542 2489999999999999999999999 99999999999999
Q ss_pred cCCCcEEEeecccceecCCCCCc-cccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCccCCCCC
Q 045553 936 DNNLNAYLSDFGLARLLGTSETH-ATTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELIS-DKKALDPSFCSFGNG 1013 (1082)
Q Consensus 936 ~~~~~~kl~DfGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~ellt-g~~p~~~~~~~~~~~ 1013 (1082)
+.++.+||+|||+++........ ......|++.|+|||++.+..++.++||||||+++|||++ |+.||......
T Consensus 179 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~---- 254 (313)
T 1t46_A 179 THGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVD---- 254 (313)
T ss_dssp ETTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSS----
T ss_pred cCCCCEEEccccccccccccccceeccCCCCcceeeChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCCcccch----
Confidence 99999999999999877544332 2334567889999999999999999999999999999999 99998643211
Q ss_pred ccHHHHHHHHHhcCCCccccccccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhhC
Q 045553 1014 FNIVAWASMLLLQGRPCEFFTAGLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQLKQIQ 1078 (1082)
Q Consensus 1014 ~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L~~i~ 1078 (1082)
.........+.. ...+...+..+.+++.+|++.||++||++.|++++|+++.
T Consensus 255 ----~~~~~~~~~~~~---------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~ 306 (313)
T 1t46_A 255 ----SKFYKMIKEGFR---------MLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQI 306 (313)
T ss_dssp ----HHHHHHHHHTCC---------CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred ----hHHHHHhccCCC---------CCCcccCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHH
Confidence 111222222211 1122344568999999999999999999999999998764
No 104
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Probab=100.00 E-value=4.1e-37 Score=340.79 Aligned_cols=253 Identities=26% Similarity=0.517 Sum_probs=207.1
Q ss_pred hcCccccceecccCceEEEEEEE-cCCeEEEEEEeecCcccc-------HHHHHHHHHHHhccCCCceeeEeeeeccCCe
Q 045553 800 TAGFNVQNCIGSGGFGATYKAEI-IPGVVVAVKRLSVGRFQG-------VQQFAAEIRTLGRVQHPNLVTLIGYHVSEAE 871 (1082)
Q Consensus 800 ~~~~~~~~~lg~G~~g~Vy~a~~-~~~~~vavK~~~~~~~~~-------~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~ 871 (1082)
.++|++.+.||+|+||.||+|.. .+++.||||++....... .+.+.+|++++++++||||+++++++.+..
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~- 96 (287)
T 4f0f_A 18 DNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPP- 96 (287)
T ss_dssp STTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTTT-
T ss_pred hccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCCC-
Confidence 46799999999999999999976 468999999986543211 267899999999999999999999987665
Q ss_pred EEEEEeecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCC--eEeccCCCCCEEEcCCCc-----EEEe
Q 045553 872 MFLIYNYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPR--VLHRDIKPSNILLDNNLN-----AYLS 944 (1082)
Q Consensus 872 ~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~--ivH~Dlk~~Nill~~~~~-----~kl~ 944 (1082)
++||||+++++|.+++... ...+++..+..++.|++.|++|||+. + |+||||||+||+++.++. +||+
T Consensus 97 -~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~~l~~~l~~lH~~---~~~ivH~dikp~Nil~~~~~~~~~~~~kl~ 171 (287)
T 4f0f_A 97 -RMVMEFVPCGDLYHRLLDK-AHPIKWSVKLRLMLDIALGIEYMQNQ---NPPIVHRDLRSPNIFLQSLDENAPVCAKVA 171 (287)
T ss_dssp -EEEEECCTTCBHHHHHHCT-TSCCCHHHHHHHHHHHHHHHHHHHTS---SSCCBCSCCSGGGEEESCCCTTCSCCEEEC
T ss_pred -eEEEEecCCCCHHHHHhcc-cCCccHHHHHHHHHHHHHHHHHHHhC---CCCeecCCCCcceEEEeccCCCCceeEEeC
Confidence 7999999999999998765 45799999999999999999999999 8 999999999999988776 9999
Q ss_pred ecccceecCCCCCccccCcccCCCcccchhc--ccCCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHH
Q 045553 945 DFGLARLLGTSETHATTDVAGTFGYVAPEYA--MTCRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASM 1022 (1082)
Q Consensus 945 DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~--~~~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~ 1022 (1082)
|||+++.... ......|++.|+|||++ ....++.++||||+|+++|||++|+.||.... .........
T Consensus 172 Dfg~~~~~~~----~~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~------~~~~~~~~~ 241 (287)
T 4f0f_A 172 DFGLSQQSVH----SVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYS------YGKIKFINM 241 (287)
T ss_dssp CCTTCBCCSS----CEECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCC------CCHHHHHHH
T ss_pred CCCccccccc----cccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCcccc------ccHHHHHHH
Confidence 9999975432 23346799999999998 45567899999999999999999999997432 112222333
Q ss_pred HHhcCCCccccccccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhh
Q 045553 1023 LLLQGRPCEFFTAGLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQLKQI 1077 (1082)
Q Consensus 1023 ~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L~~i 1077 (1082)
....+.. ...+...+..+.+++.+||+.||++||++.|+++.|+++
T Consensus 242 ~~~~~~~---------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~l 287 (287)
T 4f0f_A 242 IREEGLR---------PTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKELSEL 287 (287)
T ss_dssp HHHSCCC---------CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTC
T ss_pred HhccCCC---------CCCCcccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHhC
Confidence 2222211 122344567899999999999999999999999999875
No 105
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*
Probab=100.00 E-value=1.8e-37 Score=346.47 Aligned_cols=264 Identities=23% Similarity=0.357 Sum_probs=212.0
Q ss_pred cCccccceecccCceEEEEEEE-----cCCeEEEEEEeecCc-cccHHHHHHHHHHHhccCCCceeeEeeeeccC--CeE
Q 045553 801 AGFNVQNCIGSGGFGATYKAEI-----IPGVVVAVKRLSVGR-FQGVQQFAAEIRTLGRVQHPNLVTLIGYHVSE--AEM 872 (1082)
Q Consensus 801 ~~~~~~~~lg~G~~g~Vy~a~~-----~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~--~~~ 872 (1082)
..|++.+.||+|+||.||+|++ .+++.||||++.... ....+.+.+|++++++++||||+++++++... ...
T Consensus 21 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 100 (302)
T 4e5w_A 21 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGI 100 (302)
T ss_dssp GGEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC---CCE
T ss_pred hhhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccccchhHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCceE
Confidence 4588999999999999999984 368999999997543 34567899999999999999999999999876 668
Q ss_pred EEEEeecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceec
Q 045553 873 FLIYNYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLL 952 (1082)
Q Consensus 873 ~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~ 952 (1082)
++||||+++++|.+++... ...+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++...
T Consensus 101 ~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~ 176 (302)
T 4e5w_A 101 KLIMEFLPSGSLKEYLPKN-KNKINLKQQLKYAVQICKGMDYLGSR---QYVHRDLAARNVLVESEHQVKIGDFGLTKAI 176 (302)
T ss_dssp EEEEECCTTCBHHHHHHHH-TTTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECCCTTCEEC
T ss_pred EEEEEeCCCCcHHHHHHhc-cccCCHHHHHHHHHHHHHHHHHhhcC---CcccCCCchheEEEcCCCCEEECcccccccc
Confidence 9999999999999999664 35689999999999999999999999 9999999999999999999999999999887
Q ss_pred CCCCC--ccccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHhCCCCCCCCcc-------CCCCCccHHHHHHHH
Q 045553 953 GTSET--HATTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELISDKKALDPSFC-------SFGNGFNIVAWASML 1023 (1082)
Q Consensus 953 ~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~elltg~~p~~~~~~-------~~~~~~~~~~~~~~~ 1023 (1082)
..... .......||..|+|||++.+..++.++||||+|+++|||++|+.|+..... ........... ...
T Consensus 177 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 255 (302)
T 4e5w_A 177 ETDKEYYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQMTVTRL-VNT 255 (302)
T ss_dssp CTTCCEEECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCGGGHHHHH-HHH
T ss_pred cCCCcceeccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHccCCCcchhhHHhhccCCcccccCHHHH-HHH
Confidence 55433 223445688899999999999999999999999999999999998643210 10111111122 222
Q ss_pred HhcCCCccccccccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhhC
Q 045553 1024 LLQGRPCEFFTAGLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQLKQIQ 1078 (1082)
Q Consensus 1024 ~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L~~i~ 1078 (1082)
...+. ....+...+..+.+++.+|++.||++|||+.|+++.|+++.
T Consensus 256 ~~~~~---------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~ll 301 (302)
T 4e5w_A 256 LKEGK---------RLPCPPNCPDEVYQLMRKCWEFQPSNRTSFQNLIEGFEALL 301 (302)
T ss_dssp HHTTC---------CCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred HhccC---------CCCCCCCCCHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHh
Confidence 22221 11233455678999999999999999999999999999874
No 106
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*
Probab=100.00 E-value=1.9e-37 Score=351.71 Aligned_cols=251 Identities=21% Similarity=0.321 Sum_probs=203.9
Q ss_pred cCccccceecccCceEEEEEEEc-CCeEEEEEEeecCc---cccHHHHHHHHHHHhcc-CCCceeeEeeeeccCCeEEEE
Q 045553 801 AGFNVQNCIGSGGFGATYKAEII-PGVVVAVKRLSVGR---FQGVQQFAAEIRTLGRV-QHPNLVTLIGYHVSEAEMFLI 875 (1082)
Q Consensus 801 ~~~~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lV 875 (1082)
++|++.+.||+|+||.||+|+.. +++.||+|++.... ....+.+.+|..+++++ +||||+++++++.+....++|
T Consensus 9 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~lv 88 (345)
T 3a8x_A 9 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFV 88 (345)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred hheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCEEEEE
Confidence 56999999999999999999765 58999999997543 23355688899999887 899999999999999999999
Q ss_pred EeecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCCC
Q 045553 876 YNYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGTS 955 (1082)
Q Consensus 876 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~ 955 (1082)
|||+++|+|.+++... ..+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.....
T Consensus 89 ~e~~~gg~L~~~l~~~--~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~DFG~a~~~~~~ 163 (345)
T 3a8x_A 89 IEYVNGGDLMFHMQRQ--RKLPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRP 163 (345)
T ss_dssp ECCCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCGGGCBCSCCT
T ss_pred EeCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEECCCCCEEEEeccccccccCC
Confidence 9999999999999864 4689999999999999999999999 9999999999999999999999999999864322
Q ss_pred CCccccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCCCcccccc
Q 045553 956 ETHATTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQGRPCEFFTA 1035 (1082)
Q Consensus 956 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 1035 (1082)
. .......||+.|+|||++.+..++.++||||+||++|||++|+.||................+...+..+..
T Consensus 164 ~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~i~~~~~------ 236 (345)
T 3a8x_A 164 G-DTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQI------ 236 (345)
T ss_dssp T-CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTTTC-------CHHHHHHHHHHCCC------
T ss_pred C-CcccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCCcccccccccccHHHHHHHHHcCCC------
Confidence 2 233456899999999999999999999999999999999999999974322111111112222222222211
Q ss_pred ccCCCCChHHHHHHHHHHHHcccCCCCCCCCH
Q 045553 1036 GLWDCGPHDDLIEMLNLAIMCTGESLSSRPSM 1067 (1082)
Q Consensus 1036 ~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~ 1067 (1082)
..|...+.++.+++.+|++.||++||++
T Consensus 237 ----~~p~~~s~~~~~li~~lL~~dP~~R~~~ 264 (345)
T 3a8x_A 237 ----RIPRSLSVKAASVLKSFLNKDPKERLGC 264 (345)
T ss_dssp ----CCCTTSCHHHHHHHHHHTCSSTTTSTTC
T ss_pred ----CCCCCCCHHHHHHHHHHhcCCHhHCCCC
Confidence 1233455689999999999999999985
No 107
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Probab=100.00 E-value=1.3e-37 Score=355.71 Aligned_cols=253 Identities=23% Similarity=0.320 Sum_probs=208.5
Q ss_pred HhcCccccceecccCceEEEEEEEc-CCeEEEEEEeecCcc--ccHHHHHHHHHHHhccCCCceeeEeeeeccCCeEEEE
Q 045553 799 ATAGFNVQNCIGSGGFGATYKAEII-PGVVVAVKRLSVGRF--QGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFLI 875 (1082)
Q Consensus 799 ~~~~~~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV 875 (1082)
..++|++.+.||+|+||.||+|... +|+.||+|++..... ...+.+.+|++++++++||||+++++++.+.+..++|
T Consensus 27 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv 106 (362)
T 2bdw_A 27 FSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLV 106 (362)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred cccCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEE
Confidence 4567999999999999999999764 589999999976532 3456788999999999999999999999999999999
Q ss_pred EeecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCC---CcEEEeecccceec
Q 045553 876 YNYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNN---LNAYLSDFGLARLL 952 (1082)
Q Consensus 876 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~---~~~kl~DfGla~~~ 952 (1082)
|||+++|+|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.+ +.+||+|||++...
T Consensus 107 ~e~~~gg~L~~~l~~~--~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a~~~ 181 (362)
T 2bdw_A 107 FDLVTGGELFEDIVAR--EFYSEADASHCIQQILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEV 181 (362)
T ss_dssp ECCCCSCBHHHHHTTC--SCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEESCSSTTCCEEECCCTTCBCC
T ss_pred EecCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCchHHEEEecCCCCCCEEEeecCcceEe
Confidence 9999999999999763 4689999999999999999999999 99999999999999865 45999999999876
Q ss_pred CCCCCccccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCCCccc
Q 045553 953 GTSETHATTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQGRPCEF 1032 (1082)
Q Consensus 953 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1032 (1082)
.... ......||+.|+|||++.+..++.++||||+||++|||++|+.||... +............ .. .
T Consensus 182 ~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~--------~~~~~~~~i~~~~-~~-~ 249 (362)
T 2bdw_A 182 NDSE--AWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDE--------DQHRLYAQIKAGA-YD-Y 249 (362)
T ss_dssp TTCC--SCCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCS--------SHHHHHHHHHHTC-CC-C
T ss_pred cCCc--ccccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCCC--------CHHHHHHHHHhCC-CC-C
Confidence 5332 234467999999999999999999999999999999999999999632 1222323222221 11 0
Q ss_pred cccccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 045553 1033 FTAGLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQ 1073 (1082)
Q Consensus 1033 ~d~~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~ 1073 (1082)
... .....+.++.+++.+|++.||++||++.|++++
T Consensus 250 -~~~----~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 285 (362)
T 2bdw_A 250 -PSP----EWDTVTPEAKSLIDSMLTVNPKKRITADQALKV 285 (362)
T ss_dssp -CTT----GGGGSCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred -Ccc----cccCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 000 012345678999999999999999999998764
No 108
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}
Probab=100.00 E-value=3.2e-37 Score=360.73 Aligned_cols=254 Identities=22% Similarity=0.281 Sum_probs=208.3
Q ss_pred HhcCccccceecccCceEEEEEEE-cCCeEEEEEEeecCcc--ccHHHHHHHHHHHhccCCCceeeEeeeeccCCeEEEE
Q 045553 799 ATAGFNVQNCIGSGGFGATYKAEI-IPGVVVAVKRLSVGRF--QGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFLI 875 (1082)
Q Consensus 799 ~~~~~~~~~~lg~G~~g~Vy~a~~-~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV 875 (1082)
..++|++.+.||+|+||.||+|.. .+|+.||+|++..... ...+.+.+|++++++++||||+++++++.+.+..++|
T Consensus 9 ~~~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lv 88 (444)
T 3soa_A 9 FTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLI 88 (444)
T ss_dssp HHHHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSSEEEEE
T ss_pred ccCCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECCEEEEE
Confidence 456799999999999999999964 4689999999976542 3456789999999999999999999999999999999
Q ss_pred EeecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEc---CCCcEEEeecccceec
Q 045553 876 YNYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLD---NNLNAYLSDFGLARLL 952 (1082)
Q Consensus 876 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~---~~~~~kl~DfGla~~~ 952 (1082)
|||+++|+|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+||+++ .++.+||+|||++...
T Consensus 89 ~E~~~gg~L~~~i~~~--~~~~e~~~~~i~~qil~aL~~lH~~---givHrDlKp~NIll~~~~~~~~vkL~DFG~a~~~ 163 (444)
T 3soa_A 89 FDLVTGGELFEDIVAR--EYYSEADASHCIQQILEAVLHCHQM---GVVHRNLKPENLLLASKLKGAAVKLADFGLAIEV 163 (444)
T ss_dssp ECCCBCCBHHHHHHHC--SCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSSTTEEESBSSTTCCEEECCCSSCBCC
T ss_pred EEeCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEeccCCCCcEEEccCceeEEe
Confidence 9999999999999874 4699999999999999999999999 999999999999998 5678999999999876
Q ss_pred CCCCCccccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCCCccc
Q 045553 953 GTSETHATTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQGRPCEF 1032 (1082)
Q Consensus 953 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1032 (1082)
..... ......||+.|+|||++.+..++.++||||+||++|+|++|+.||... +.......... +... .
T Consensus 164 ~~~~~-~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~~--------~~~~~~~~i~~-~~~~-~ 232 (444)
T 3soa_A 164 EGEQQ-AWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDE--------DQHRLYQQIKA-GAYD-F 232 (444)
T ss_dssp CTTCC-BCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCCS--------SHHHHHHHHHH-TCCC-C
T ss_pred cCCCc-eeecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCc--------cHHHHHHHHHh-CCCC-C
Confidence 54322 234567999999999999999999999999999999999999999632 22222233222 2111 0
Q ss_pred cccccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 045553 1033 FTAGLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQ 1073 (1082)
Q Consensus 1033 ~d~~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~ 1073 (1082)
... .....+.++.+++.+|++.||++|||+.|++++
T Consensus 233 -~~~----~~~~~s~~~~~li~~~L~~dP~~Rpta~e~L~h 268 (444)
T 3soa_A 233 -PSP----EWDTVTPEAKDLINKMLTINPSKRITAAEALKH 268 (444)
T ss_dssp -CTT----TTTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred -Ccc----ccccCCHHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence 001 112345689999999999999999999999874
No 109
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}
Probab=100.00 E-value=1.1e-37 Score=351.68 Aligned_cols=247 Identities=22% Similarity=0.352 Sum_probs=205.6
Q ss_pred hcCccccceecccCceEEEEEEE-cCCeEEEEEEeecCc---cccHHHHHHHHHHHhccCCCceeeEeeeeccCCeEEEE
Q 045553 800 TAGFNVQNCIGSGGFGATYKAEI-IPGVVVAVKRLSVGR---FQGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFLI 875 (1082)
Q Consensus 800 ~~~~~~~~~lg~G~~g~Vy~a~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV 875 (1082)
.++|++.+.||+|+||.||+|.. .+++.||||++.... ......+.+|+++++.++||||+++++++.+....++|
T Consensus 8 i~~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv 87 (336)
T 3h4j_B 8 IGPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVMV 87 (336)
T ss_dssp ETTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred cCCEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEE
Confidence 46799999999999999999975 568999999986432 22345788999999999999999999999999999999
Q ss_pred EeecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCCC
Q 045553 876 YNYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGTS 955 (1082)
Q Consensus 876 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~ 955 (1082)
|||+ +|+|.+++... ..+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||++......
T Consensus 88 ~E~~-~g~l~~~l~~~--~~l~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kl~DFG~s~~~~~~ 161 (336)
T 3h4j_B 88 IEYA-GGELFDYIVEK--KRMTEDEGRRFFQQIICAIEYCHRH---KIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDG 161 (336)
T ss_dssp ECCC-CEEHHHHHHHH--CSCCHHHHHHHHHHHHHHHHHHHHH---TCCCCCCSTTTEEECTTCCEEECCSSCTBTTTTS
T ss_pred EECC-CCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCchhhEEEcCCCCEEEEEeccceeccCC
Confidence 9999 78999998764 4699999999999999999999999 9999999999999999999999999999876433
Q ss_pred CCccccCcccCCCcccchhcccCCC-CchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCCCccccc
Q 045553 956 ETHATTDVAGTFGYVAPEYAMTCRV-SDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQGRPCEFFT 1034 (1082)
Q Consensus 956 ~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 1034 (1082)
. ......||+.|+|||++.+..+ +.++||||+||++|+|++|+.||+..... .....+.
T Consensus 162 ~--~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~------------------~~~~~i~ 221 (336)
T 3h4j_B 162 N--FLKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIP------------------NLFKKVN 221 (336)
T ss_dssp B--TTCCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSST------------------TCBCCCC
T ss_pred c--ccccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCccHH------------------HHHHHHH
Confidence 2 2344579999999999988776 78999999999999999999999753221 0001111
Q ss_pred cccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 045553 1035 AGLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQ 1073 (1082)
Q Consensus 1035 ~~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~ 1073 (1082)
.. ....+...+..+.+++.+|++.||.+|||+.|++++
T Consensus 222 ~~-~~~~p~~~s~~~~~li~~~L~~dP~~Rpt~~eil~h 259 (336)
T 3h4j_B 222 SC-VYVMPDFLSPGAQSLIRRMIVADPMQRITIQEIRRD 259 (336)
T ss_dssp SS-CCCCCTTSCHHHHHHHHTTSCSSGGGSCCHHHHTTC
T ss_pred cC-CCCCcccCCHHHHHHHHHHcCCChhHCcCHHHHHhC
Confidence 00 112344456789999999999999999999999764
No 110
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Probab=100.00 E-value=2.2e-37 Score=343.03 Aligned_cols=262 Identities=23% Similarity=0.297 Sum_probs=202.9
Q ss_pred cCccccceecccCceEEEEEEEcCCeEEEEEEeecCcc--ccHHHHHHHHHHHhccCCCceeeEeeeeccCCeEEEEEee
Q 045553 801 AGFNVQNCIGSGGFGATYKAEIIPGVVVAVKRLSVGRF--QGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFLIYNY 878 (1082)
Q Consensus 801 ~~~~~~~~lg~G~~g~Vy~a~~~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~ 878 (1082)
++|++.+.||+|+||+||+|+..+|+.||+|++..... ...+.+.+|++++++++||||+++++++.+.+..++||||
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 81 (288)
T 1ob3_A 2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEH 81 (288)
T ss_dssp CSEEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred ccchhhhhcccCCCEEEEEEEcCCCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEccCCeEEEEEEe
Confidence 47899999999999999999888899999999965432 2346788999999999999999999999999999999999
Q ss_pred cCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCCCCCc
Q 045553 879 LPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGTSETH 958 (1082)
Q Consensus 879 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~ 958 (1082)
++ ++|.+++... ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.......
T Consensus 82 ~~-~~l~~~~~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~- 155 (288)
T 1ob3_A 82 LD-QDLKKLLDVC-EGGLESVTAKSFLLQLLNGIAYCHDR---RVLHRDLKPQNLLINREGELKIADFGLARAFGIPVR- 155 (288)
T ss_dssp CS-EEHHHHHHTS-TTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC----
T ss_pred cC-CCHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCCEEEeECccccccCcccc-
Confidence 96 5999998865 35689999999999999999999999 999999999999999999999999999987643222
Q ss_pred cccCcccCCCcccchhccc-CCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCCCcc------
Q 045553 959 ATTDVAGTFGYVAPEYAMT-CRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQGRPCE------ 1031 (1082)
Q Consensus 959 ~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------ 1031 (1082)
......||+.|+|||++.+ ..++.++||||+||++|||++|+.||..... ......+...........
T Consensus 156 ~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~ 230 (288)
T 1ob3_A 156 KYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSE-----ADQLMRIFRILGTPNSKNWPNVTE 230 (288)
T ss_dssp ------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSH-----HHHHHHHHHHHCCCCTTTSTTGGG
T ss_pred ccccccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCH-----HHHHHHHHHHHCCCChhhchhhhc
Confidence 2234568999999999976 4589999999999999999999999974211 111111111111111000
Q ss_pred --ccccccCC-------CCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 045553 1032 --FFTAGLWD-------CGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQ 1073 (1082)
Q Consensus 1032 --~~d~~l~~-------~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~ 1073 (1082)
.+++.... ......+.++.+++.+|++.||++|||+.|++++
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 281 (288)
T 1ob3_A 231 LPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEH 281 (288)
T ss_dssp STTCCTTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred ccccccccccccCccHHHHhhhcCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence 01111110 0112345678999999999999999999999864
No 111
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...
Probab=100.00 E-value=3.7e-37 Score=349.07 Aligned_cols=258 Identities=24% Similarity=0.427 Sum_probs=213.0
Q ss_pred hcCccccceecccCceEEEEEEEc--------CCeEEEEEEeecCc-cccHHHHHHHHHHHhcc-CCCceeeEeeeeccC
Q 045553 800 TAGFNVQNCIGSGGFGATYKAEII--------PGVVVAVKRLSVGR-FQGVQQFAAEIRTLGRV-QHPNLVTLIGYHVSE 869 (1082)
Q Consensus 800 ~~~~~~~~~lg~G~~g~Vy~a~~~--------~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~ 869 (1082)
.++|++.+.||+|+||.||+|+.. ++..||||++.... ....+.+.+|+++++++ +||||+++++++...
T Consensus 34 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~ 113 (334)
T 2pvf_A 34 RDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD 113 (334)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred HhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHHHHHHhhcCCCEeeEEEEEccC
Confidence 467999999999999999999763 46789999997553 24456789999999999 899999999999999
Q ss_pred CeEEEEEeecCCCCHHHHHhhCCC--------------CCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEE
Q 045553 870 AEMFLIYNYLPGGNLEKFIQDRPR--------------RTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILL 935 (1082)
Q Consensus 870 ~~~~lV~E~~~~gsL~~~l~~~~~--------------~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill 935 (1082)
+..++||||+++|+|.+++..... ..+++..++.++.|++.||+|||+. +|+||||||+||++
T Consensus 114 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll 190 (334)
T 2pvf_A 114 GPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLV 190 (334)
T ss_dssp SCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEE
T ss_pred CceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCccceEEE
Confidence 999999999999999999986532 3489999999999999999999999 99999999999999
Q ss_pred cCCCcEEEeecccceecCCCCCc-cccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCccCCCCC
Q 045553 936 DNNLNAYLSDFGLARLLGTSETH-ATTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELIS-DKKALDPSFCSFGNG 1013 (1082)
Q Consensus 936 ~~~~~~kl~DfGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~ellt-g~~p~~~~~~~~~~~ 1013 (1082)
+.++.+||+|||+++........ ......+++.|+|||++.+..++.++||||||+++|||++ |+.||...
T Consensus 191 ~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~------- 263 (334)
T 2pvf_A 191 TENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGI------- 263 (334)
T ss_dssp CTTCCEEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTC-------
T ss_pred cCCCCEEEccccccccccccccccccCCCCcccceeChHHhcCCCcChHHHHHHHHHHHHHHHhCCCCCcCcC-------
Confidence 99999999999999877544322 2333457889999999999999999999999999999999 99998632
Q ss_pred ccHHHHHHHHHhcCCCccccccccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhhC
Q 045553 1014 FNIVAWASMLLLQGRPCEFFTAGLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQLKQIQ 1078 (1082)
Q Consensus 1014 ~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L~~i~ 1078 (1082)
...+....... +... ..+...+..+.+++.+|++.+|++||++.|+++.|+++.
T Consensus 264 -~~~~~~~~~~~-~~~~---------~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~l~ 317 (334)
T 2pvf_A 264 -PVEELFKLLKE-GHRM---------DKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIL 317 (334)
T ss_dssp -CHHHHHHHHHH-TCCC---------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred -CHHHHHHHHhc-CCCC---------CCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 22233332222 2111 123344568999999999999999999999999998874
No 112
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*
Probab=100.00 E-value=1.7e-38 Score=358.88 Aligned_cols=267 Identities=26% Similarity=0.372 Sum_probs=215.6
Q ss_pred hcCccccceecccCceEEEEEEE-----cCCeEEEEEEeecCccccHHHHHHHHHHHhccCCCceeeEeeeec--cCCeE
Q 045553 800 TAGFNVQNCIGSGGFGATYKAEI-----IPGVVVAVKRLSVGRFQGVQQFAAEIRTLGRVQHPNLVTLIGYHV--SEAEM 872 (1082)
Q Consensus 800 ~~~~~~~~~lg~G~~g~Vy~a~~-----~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~--~~~~~ 872 (1082)
..+|++.+.||+|+||.||+|++ .+++.||||++........+.+.+|++++++++||||+++++++. +....
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 101 (327)
T 3lxl_A 22 ERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSL 101 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSSCEE
T ss_pred hhhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCCHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCCceE
Confidence 35799999999999999999984 368999999998776666778999999999999999999999876 45678
Q ss_pred EEEEeecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceec
Q 045553 873 FLIYNYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLL 952 (1082)
Q Consensus 873 ~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~ 952 (1082)
++||||+++++|.+++... ...+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||.++..
T Consensus 102 ~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~ 177 (327)
T 3lxl_A 102 RLVMEYLPSGCLRDFLQRH-RARLDASRLLLYSSQICKGMEYLGSR---RCVHRDLAARNILVESEAHVKIADFGLAKLL 177 (327)
T ss_dssp EEEEECCTTCBHHHHHHHH-GGGCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECCGGGCEEC
T ss_pred EEEEeecCCCCHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCChhhEEECCCCCEEEcccccceec
Confidence 9999999999999999864 23689999999999999999999999 9999999999999999999999999999987
Q ss_pred CCCCCc--cccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHhCCCCCCCCccC------CCCCccHHHHHHHHH
Q 045553 953 GTSETH--ATTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELISDKKALDPSFCS------FGNGFNIVAWASMLL 1024 (1082)
Q Consensus 953 ~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~elltg~~p~~~~~~~------~~~~~~~~~~~~~~~ 1024 (1082)
...... ......|+..|+|||++.+..++.++||||||+++|||++|+.||...... ...............
T Consensus 178 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (327)
T 3lxl_A 178 PLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALSRLLELL 257 (327)
T ss_dssp CTTCSEEECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHCC----CCHHHHHHHHH
T ss_pred ccCCccceeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCCCCccccchhhhhcccccccccHHHHHHHh
Confidence 544332 233456888899999999999999999999999999999999998632110 000001111111111
Q ss_pred hcCCCccccccccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhhCC
Q 045553 1025 LQGRPCEFFTAGLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQLKQIQP 1079 (1082)
Q Consensus 1025 ~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L~~i~~ 1079 (1082)
..+ .....+...+..+.+++.+|++.||++||++.|++++|+.+..
T Consensus 258 ~~~---------~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~ 303 (327)
T 3lxl_A 258 EEG---------QRLPAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQLDMLWS 303 (327)
T ss_dssp HTT---------CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHC--
T ss_pred hcc---------cCCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHh
Confidence 111 1222344556789999999999999999999999999998754
No 113
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Probab=100.00 E-value=1.1e-37 Score=357.64 Aligned_cols=267 Identities=18% Similarity=0.249 Sum_probs=208.9
Q ss_pred HhcCccccceecccCceEEEEEEEcC------CeEEEEEEeecCccccH-----------HHHHHHHHHHhccCCCceee
Q 045553 799 ATAGFNVQNCIGSGGFGATYKAEIIP------GVVVAVKRLSVGRFQGV-----------QQFAAEIRTLGRVQHPNLVT 861 (1082)
Q Consensus 799 ~~~~~~~~~~lg~G~~g~Vy~a~~~~------~~~vavK~~~~~~~~~~-----------~~~~~e~~~l~~l~h~niv~ 861 (1082)
..++|++.+.||+|+||.||+|.... ++.||||++........ ..+..|+..++.++||||++
T Consensus 33 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~ 112 (364)
T 3op5_A 33 AAAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPK 112 (364)
T ss_dssp TCCEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCC
T ss_pred CCCeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCe
Confidence 34579999999999999999997754 47899999876542111 12345666778889999999
Q ss_pred EeeeeccC----CeEEEEEeecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEc-
Q 045553 862 LIGYHVSE----AEMFLIYNYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLD- 936 (1082)
Q Consensus 862 l~~~~~~~----~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~- 936 (1082)
+++++... ...++||||+ +++|.+++... ...+++..+..++.|++.||+|||+. +|+||||||+||+++
T Consensus 113 ~~~~~~~~~~~~~~~~lv~e~~-g~~L~~~~~~~-~~~l~~~~~~~i~~qi~~~l~~lH~~---~iiHrDlkp~Nill~~ 187 (364)
T 3op5_A 113 YWGSGLHDKNGKSYRFMIMDRF-GSDLQKIYEAN-AKRFSRKTVLQLSLRILDILEYIHEH---EYVHGDIKASNLLLNY 187 (364)
T ss_dssp EEEEEEEEETTEEEEEEEEECE-EEEHHHHHHHT-TSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEES
T ss_pred EEeeeeeccCCcceEEEEEeCC-CCCHHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEEecCCHHHEEEec
Confidence 99998764 4589999999 99999999875 45799999999999999999999999 999999999999999
Q ss_pred -CCCcEEEeecccceecCCCCCc------cccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHhCCCCCCCCccC
Q 045553 937 -NNLNAYLSDFGLARLLGTSETH------ATTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELISDKKALDPSFCS 1009 (1082)
Q Consensus 937 -~~~~~kl~DfGla~~~~~~~~~------~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~elltg~~p~~~~~~~ 1009 (1082)
.++.+||+|||+++.+...... ......||+.|+|||++.+..++.++|||||||++|||++|+.||.....
T Consensus 188 ~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~Pf~~~~~- 266 (364)
T 3op5_A 188 KNPDQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWEDNLK- 266 (364)
T ss_dssp SCTTCEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTT-
T ss_pred CCCCeEEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHHHHhCCCCcccccc-
Confidence 8899999999999877533221 12345599999999999999999999999999999999999999974321
Q ss_pred CCCCccHHHHHHHHHhcCCCccccccccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhhC
Q 045553 1010 FGNGFNIVAWASMLLLQGRPCEFFTAGLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQLKQIQ 1078 (1082)
Q Consensus 1010 ~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L~~i~ 1078 (1082)
......+...... ....+.++..+. +...+.++.+++..||+.+|++||++.+|++.|+++.
T Consensus 267 ---~~~~~~~~~~~~~-~~~~~~~~~~~~---~~~~~~~~~~li~~cl~~~p~~RP~~~~l~~~l~~~~ 328 (364)
T 3op5_A 267 ---DPKYVRDSKIRYR-ENIASLMDKCFP---AANAPGEIAKYMETVKLLDYTEKPLYENLRDILLQGL 328 (364)
T ss_dssp ---CHHHHHHHHHHHH-HCHHHHHHHHSC---TTCCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHH
T ss_pred ---CHHHHHHHHHHhh-hhHHHHHHHhcc---cccCHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHH
Confidence 2222222222222 122333333221 1233568999999999999999999999999998753
No 114
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}
Probab=100.00 E-value=4.2e-38 Score=355.19 Aligned_cols=260 Identities=22% Similarity=0.371 Sum_probs=197.2
Q ss_pred HHhcCccccceecccCceEEEEEEEcC-C---eEEEEEEeecC--ccccHHHHHHHHHHHhccCCCceeeEeeeeccCCe
Q 045553 798 RATAGFNVQNCIGSGGFGATYKAEIIP-G---VVVAVKRLSVG--RFQGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAE 871 (1082)
Q Consensus 798 ~~~~~~~~~~~lg~G~~g~Vy~a~~~~-~---~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~ 871 (1082)
...++|++.+.||+|+||.||+|.... + ..||||++... .....+.+.+|++++++++||||+++++++.....
T Consensus 20 i~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 99 (323)
T 3qup_A 20 IPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRA 99 (323)
T ss_dssp CC---CEEEEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC--
T ss_pred cChhHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceeecccc
Confidence 345689999999999999999996543 2 27999999754 33456789999999999999999999999987665
Q ss_pred E------EEEEeecCCCCHHHHHhhCC----CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcE
Q 045553 872 M------FLIYNYLPGGNLEKFIQDRP----RRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNA 941 (1082)
Q Consensus 872 ~------~lV~E~~~~gsL~~~l~~~~----~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~ 941 (1082)
. ++||||+++|+|.+++.... ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+
T Consensus 100 ~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~---~ivH~Dikp~NIli~~~~~~ 176 (323)
T 3qup_A 100 KGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSR---NFIHRDLAARNCMLAEDMTV 176 (323)
T ss_dssp -----CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTSCE
T ss_pred ccCCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHcC---CcccCCCCcceEEEcCCCCE
Confidence 4 99999999999999997532 22589999999999999999999999 99999999999999999999
Q ss_pred EEeecccceecCCCCCc-cccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCccCCCCCccHHHH
Q 045553 942 YLSDFGLARLLGTSETH-ATTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELIS-DKKALDPSFCSFGNGFNIVAW 1019 (1082)
Q Consensus 942 kl~DfGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~ellt-g~~p~~~~~~~~~~~~~~~~~ 1019 (1082)
||+|||+++........ ......+++.|+|||.+.+..++.++||||||+++|||++ |+.||..... .. .
T Consensus 177 kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~-----~~---~ 248 (323)
T 3qup_A 177 CVADFGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIEN-----AE---I 248 (323)
T ss_dssp EECCCCC-----------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCG-----GG---H
T ss_pred EEeeccccccccccccccccccccCcccccCchhhcCCCCCCccchhhHHHHHHHHHhCCCCCccccCh-----HH---H
Confidence 99999999876443322 2233457889999999999999999999999999999999 8999874321 11 1
Q ss_pred HHHHHhcCCCccccccccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhhC
Q 045553 1020 ASMLLLQGRPCEFFTAGLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQLKQIQ 1078 (1082)
Q Consensus 1020 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L~~i~ 1078 (1082)
......... ...+...+.++.+++.+|++.||++||++.|+++.|+++.
T Consensus 249 ~~~~~~~~~----------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~l 297 (323)
T 3qup_A 249 YNYLIGGNR----------LKQPPECMEEVYDLMYQCWSADPKQRPSFTCLRMELENIL 297 (323)
T ss_dssp HHHHHTTCC----------CCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred HHHHhcCCC----------CCCCCccCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 122221111 1123345568999999999999999999999999999874
No 115
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Probab=100.00 E-value=1.2e-37 Score=344.07 Aligned_cols=256 Identities=23% Similarity=0.362 Sum_probs=206.6
Q ss_pred hcCccccceecccCceEEEEEEEcC----CeEEEEEEeecCc-cccHHHHHHHHHHHhccCCCceeeEeeeeccCCeEEE
Q 045553 800 TAGFNVQNCIGSGGFGATYKAEIIP----GVVVAVKRLSVGR-FQGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFL 874 (1082)
Q Consensus 800 ~~~~~~~~~lg~G~~g~Vy~a~~~~----~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 874 (1082)
.++|++.+.||+|+||.||+|.... +..||+|++.... ....+.+.+|++++++++||||+++++++.+ +..++
T Consensus 11 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~ 89 (281)
T 3cc6_A 11 REDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEE-EPTWI 89 (281)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCCTTBCCEEEEECS-SSCEE
T ss_pred ccceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccCchHHHHHHHHHHHHHhCCCCCcceEEEEEcC-CCCEE
Confidence 4679999999999999999997543 3469999987653 3456779999999999999999999999865 45689
Q ss_pred EEeecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCC
Q 045553 875 IYNYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGT 954 (1082)
Q Consensus 875 V~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~ 954 (1082)
||||+++++|.+++... ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++.....
T Consensus 90 v~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 165 (281)
T 3cc6_A 90 IMELYPYGELGHYLERN-KNSLKVLTLVLYSLQICKAMAYLESI---NCVHRDIAVRNILVASPECVKLGDFGLSRYIED 165 (281)
T ss_dssp EEECCTTCBHHHHHHHH-TTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEEEETTEEEECCCCGGGCC--
T ss_pred EEecCCCCCHHHHHHhc-cccCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCccceEEECCCCcEEeCccCCCccccc
Confidence 99999999999999865 35689999999999999999999999 999999999999999999999999999987655
Q ss_pred CCCccccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCccCCCCCccHHHHHHHHHhcCCCcccc
Q 045553 955 SETHATTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELIS-DKKALDPSFCSFGNGFNIVAWASMLLLQGRPCEFF 1033 (1082)
Q Consensus 955 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1033 (1082)
..........+++.|+|||++.+..++.++||||||+++|||++ |+.||.... ....... . ..+...
T Consensus 166 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~~~-----~~~~~~~---~-~~~~~~--- 233 (281)
T 3cc6_A 166 EDYYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLE-----NKDVIGV---L-EKGDRL--- 233 (281)
T ss_dssp -------CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSC-----GGGHHHH---H-HHTCCC---
T ss_pred ccccccccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCcccCC-----hHHHHHH---H-hcCCCC---
Confidence 44333444567889999999999999999999999999999998 999996432 1222221 1 111111
Q ss_pred ccccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhhC
Q 045553 1034 TAGLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQLKQIQ 1078 (1082)
Q Consensus 1034 d~~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L~~i~ 1078 (1082)
..+...+..+.+++.+|++.+|++||++.|++++|+++.
T Consensus 234 ------~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~ 272 (281)
T 3cc6_A 234 ------PKPDLCPPVLYTLMTRCWDYDPSDRPRFTELVCSLSDVY 272 (281)
T ss_dssp ------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred ------CCCCCCCHHHHHHHHHHccCCchhCcCHHHHHHHHHHHH
Confidence 122334567999999999999999999999999998764
No 116
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Probab=100.00 E-value=1.7e-37 Score=344.25 Aligned_cols=254 Identities=20% Similarity=0.304 Sum_probs=207.2
Q ss_pred hcCccccceecccCceEEEEEEEcC-C-------eEEEEEEeecCccccHHHHHHHHHHHhccCCCceeeEeeeeccCCe
Q 045553 800 TAGFNVQNCIGSGGFGATYKAEIIP-G-------VVVAVKRLSVGRFQGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAE 871 (1082)
Q Consensus 800 ~~~~~~~~~lg~G~~g~Vy~a~~~~-~-------~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~ 871 (1082)
.++|++.+.||+|+||.||+|.... + ..||+|++........+.+.+|++++++++||||+++++++.+.+.
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 86 (289)
T 4fvq_A 7 NEDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCVCGDE 86 (289)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGGGGGHHHHHHHHHHHHTSCCTTBCCEEEEECCTTC
T ss_pred hhHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhcccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEeCCC
Confidence 3578999999999999999996442 3 5799999987666777889999999999999999999999999999
Q ss_pred EEEEEeecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCc--------EEE
Q 045553 872 MFLIYNYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLN--------AYL 943 (1082)
Q Consensus 872 ~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~--------~kl 943 (1082)
.++||||+++++|.+++... ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++. +||
T Consensus 87 ~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~~~~~kl 162 (289)
T 4fvq_A 87 NILVQEFVKFGSLDTYLKKN-KNCINILWKLEVAKQLAAAMHFLEEN---TLIHGNVCAKNILLIREEDRKTGNPPFIKL 162 (289)
T ss_dssp CEEEEECCTTCBHHHHHHHT-GGGCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEEECCBGGGTBCCEEEE
T ss_pred CEEEEECCCCCCHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHhhC---CeECCCcCcceEEEecCCcccccccceeee
Confidence 99999999999999999875 34589999999999999999999999 9999999999999998887 999
Q ss_pred eecccceecCCCCCccccCcccCCCcccchhccc-CCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHH
Q 045553 944 SDFGLARLLGTSETHATTDVAGTFGYVAPEYAMT-CRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASM 1022 (1082)
Q Consensus 944 ~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~ 1022 (1082)
+|||.+...... ....|++.|+|||++.+ ..++.++||||||+++|||++|+.|+... .........
T Consensus 163 ~Dfg~~~~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~-------~~~~~~~~~ 230 (289)
T 4fvq_A 163 SDPGISITVLPK-----DILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSA-------LDSQRKLQF 230 (289)
T ss_dssp CCCCSCTTTSCH-----HHHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTT-------SCHHHHHHH
T ss_pred ccCcccccccCc-----cccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCccc-------cchHHHHHH
Confidence 999998654321 22457899999999987 77999999999999999999976555421 111222221
Q ss_pred HHhcCCCccccccccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhhCCCC
Q 045553 1023 LLLQGRPCEFFTAGLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQLKQIQPPA 1081 (1082)
Q Consensus 1023 ~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L~~i~~~~ 1081 (1082)
...... .+...+.++.+++.+||+.||++|||+.|+++.|+++..|.
T Consensus 231 ~~~~~~------------~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~l~~p~ 277 (289)
T 4fvq_A 231 YEDRHQ------------LPAPKAAELANLINNCMDYEPDHRPSFRAIIRDLNSLFTPD 277 (289)
T ss_dssp HHTTCC------------CCCCSSCTTHHHHHHHSCSSGGGSCCHHHHHHHHHTCC---
T ss_pred hhccCC------------CCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhcCCC
Confidence 111111 11122346889999999999999999999999999987653
No 117
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7
Probab=100.00 E-value=8e-38 Score=376.10 Aligned_cols=257 Identities=24% Similarity=0.390 Sum_probs=215.3
Q ss_pred hcCccccceecccCceEEEEEEEcCCeEEEEEEeecCccccHHHHHHHHHHHhccCCCceeeEeeeeccCCeEEEEEeec
Q 045553 800 TAGFNVQNCIGSGGFGATYKAEIIPGVVVAVKRLSVGRFQGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFLIYNYL 879 (1082)
Q Consensus 800 ~~~~~~~~~lg~G~~g~Vy~a~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~~ 879 (1082)
.++|++.+.||+|+||.||+|.+.++..||||+++... ...++|.+|++++++++||||+++++++.+ +..++||||+
T Consensus 266 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~-~~~~lv~e~~ 343 (535)
T 2h8h_A 266 RESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYM 343 (535)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEECCC
T ss_pred hhhhhhheecccCCCeEEEEEEECCCceEEEEEeCCCC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEee-ccceEeeehh
Confidence 45688999999999999999999888899999997654 345789999999999999999999999876 6789999999
Q ss_pred CCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCCCCCcc
Q 045553 880 PGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGTSETHA 959 (1082)
Q Consensus 880 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~ 959 (1082)
++|+|.++++......+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++.........
T Consensus 344 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~ 420 (535)
T 2h8h_A 344 SKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTA 420 (535)
T ss_dssp TTEEHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCTTSTTTCCCHHHHT
T ss_pred cCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHhhEEEcCCCcEEEcccccceecCCCceec
Confidence 999999999864445689999999999999999999999 99999999999999999999999999998764322222
Q ss_pred ccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCccCCCCCccHHHHHHHHHhcCCCccccccccC
Q 045553 960 TTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELIS-DKKALDPSFCSFGNGFNIVAWASMLLLQGRPCEFFTAGLW 1038 (1082)
Q Consensus 960 ~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 1038 (1082)
.....++..|+|||++.+..++.++|||||||++|||++ |+.||... ...+..... ..+. +
T Consensus 421 ~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~--------~~~~~~~~i-~~~~---------~ 482 (535)
T 2h8h_A 421 RQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGM--------VNREVLDQV-ERGY---------R 482 (535)
T ss_dssp TCSTTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTC--------CHHHHHHHH-HTTC---------C
T ss_pred ccCCcCcccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCC--------CHHHHHHHH-HcCC---------C
Confidence 334457789999999999999999999999999999999 89998632 222333222 2221 1
Q ss_pred CCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhhCC
Q 045553 1039 DCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQLKQIQP 1079 (1082)
Q Consensus 1039 ~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L~~i~~ 1079 (1082)
...+...+..+.+++.+||+.+|++||++.+|++.|+.+..
T Consensus 483 ~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~~~ 523 (535)
T 2h8h_A 483 MPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFT 523 (535)
T ss_dssp CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSC
T ss_pred CCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHhh
Confidence 12234556789999999999999999999999999998754
No 118
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Probab=100.00 E-value=4e-37 Score=349.60 Aligned_cols=245 Identities=20% Similarity=0.303 Sum_probs=208.6
Q ss_pred cCccccceecccCceEEEEEEEc-CCeEEEEEEeecCc---cccHHHHHHHHHHHhccCCCceeeEeeeeccCCeEEEEE
Q 045553 801 AGFNVQNCIGSGGFGATYKAEII-PGVVVAVKRLSVGR---FQGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFLIY 876 (1082)
Q Consensus 801 ~~~~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 876 (1082)
++|++.+.||+|+||.||+|+.. +|+.||||++.... ....+.+.+|+++++.++||||+++++++.+....|+||
T Consensus 41 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 120 (350)
T 1rdq_E 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVM 120 (350)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HHCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEEEE
Confidence 57999999999999999999765 68999999986542 234567889999999999999999999999999999999
Q ss_pred eecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCCCC
Q 045553 877 NYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGTSE 956 (1082)
Q Consensus 877 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~ 956 (1082)
||+++|+|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.....
T Consensus 121 e~~~gg~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~DFg~a~~~~~~- 194 (350)
T 1rdq_E 121 EYVAGGEMFSHLRRI--GRFSEPHARFYAAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR- 194 (350)
T ss_dssp ECCTTCBHHHHHHHH--CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECSSC-
T ss_pred cCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCccceEEECCCCCEEEcccccceeccCC-
Confidence 999999999999874 4689999999999999999999999 9999999999999999999999999999876432
Q ss_pred CccccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCCCccccccc
Q 045553 957 THATTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQGRPCEFFTAG 1036 (1082)
Q Consensus 957 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 1036 (1082)
.....||+.|+|||++.+..++.++||||+||++|||++|+.||... ...+......... .
T Consensus 195 ---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~--------~~~~~~~~i~~~~-~------- 255 (350)
T 1rdq_E 195 ---TWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFAD--------QPIQIYEKIVSGK-V------- 255 (350)
T ss_dssp ---BCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCS--------SHHHHHHHHHHCC-C-------
T ss_pred ---cccccCCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCCC--------CHHHHHHHHHcCC-C-------
Confidence 23457999999999999999999999999999999999999999632 2233333333221 1
Q ss_pred cCCCCChHHHHHHHHHHHHcccCCCCCCCC-----HHHHHHH
Q 045553 1037 LWDCGPHDDLIEMLNLAIMCTGESLSSRPS-----MRQVAQQ 1073 (1082)
Q Consensus 1037 l~~~~~~~~~~~l~~li~~cl~~~p~~RPt-----~~ev~~~ 1073 (1082)
..+...+..+.+++.+|++.||++||+ +.||.++
T Consensus 256 ---~~p~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~ei~~h 294 (350)
T 1rdq_E 256 ---RFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNH 294 (350)
T ss_dssp ---CCCTTCCHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHTS
T ss_pred ---CCCCCCCHHHHHHHHHHhhcCHHhccCCccCCHHHHHhC
Confidence 123344568999999999999999998 8888653
No 119
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}
Probab=100.00 E-value=3e-37 Score=343.93 Aligned_cols=250 Identities=22% Similarity=0.352 Sum_probs=199.8
Q ss_pred hcCccccceecccCceEEEEEEE-cCCeEEEEEEeecCccc--------------------------cHHHHHHHHHHHh
Q 045553 800 TAGFNVQNCIGSGGFGATYKAEI-IPGVVVAVKRLSVGRFQ--------------------------GVQQFAAEIRTLG 852 (1082)
Q Consensus 800 ~~~~~~~~~lg~G~~g~Vy~a~~-~~~~~vavK~~~~~~~~--------------------------~~~~~~~e~~~l~ 852 (1082)
.++|++.+.||+|+||.||+|.. .+++.||||++...... ..+.+.+|+++++
T Consensus 12 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~ 91 (298)
T 2zv2_A 12 LNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILK 91 (298)
T ss_dssp ETTEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHH
T ss_pred ecceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHH
Confidence 36799999999999999999975 46899999998654311 1356889999999
Q ss_pred ccCCCceeeEeeeecc--CCeEEEEEeecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCC
Q 045553 853 RVQHPNLVTLIGYHVS--EAEMFLIYNYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKP 930 (1082)
Q Consensus 853 ~l~h~niv~l~~~~~~--~~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~ 930 (1082)
+++||||+++++++.+ ....++||||+++++|.+++.. ..+++..+..++.|++.||+|||+. +|+||||||
T Consensus 92 ~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~---~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp 165 (298)
T 2zv2_A 92 KLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTL---KPLSEDQARFYFQDLIKGIEYLHYQ---KIIHRDIKP 165 (298)
T ss_dssp TCCCTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSSCS---SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCG
T ss_pred hCCCCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCH
Confidence 9999999999999886 5689999999999999887543 4699999999999999999999999 999999999
Q ss_pred CCEEEcCCCcEEEeecccceecCCCCCccccCcccCCCcccchhcccCC---CCchhhHHHHHHHHHHHHhCCCCCCCCc
Q 045553 931 SNILLDNNLNAYLSDFGLARLLGTSETHATTDVAGTFGYVAPEYAMTCR---VSDKADVYSFGVVLLELISDKKALDPSF 1007 (1082)
Q Consensus 931 ~Nill~~~~~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~---~~~~~Dv~slGvll~elltg~~p~~~~~ 1007 (1082)
+||+++.++.+||+|||+++....... ......||+.|+|||++.+.. ++.++|||||||++|||++|+.||...
T Consensus 166 ~Nil~~~~~~~kl~Dfg~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~- 243 (298)
T 2zv2_A 166 SNLLVGEDGHIKIADFGVSNEFKGSDA-LLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDE- 243 (298)
T ss_dssp GGEEECTTSCEEECCCTTCEECSSSSC-EECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSCSSCCS-
T ss_pred HHEEECCCCCEEEecCCCccccccccc-cccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCc-
Confidence 999999999999999999987654332 234457999999999998765 478999999999999999999999632
Q ss_pred cCCCCCccHHHHHHHHHhcCCCccccccccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 045553 1008 CSFGNGFNIVAWASMLLLQGRPCEFFTAGLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQ 1073 (1082)
Q Consensus 1008 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~ 1073 (1082)
....+........ .. . ......+..+.+++.+|++.||++||++.|++++
T Consensus 244 -------~~~~~~~~~~~~~-~~-~-------~~~~~~~~~l~~li~~~l~~dp~~R~s~~e~l~h 293 (298)
T 2zv2_A 244 -------RIMCLHSKIKSQA-LE-F-------PDQPDIAEDLKDLITRMLDKNPESRIVVPEIKLH 293 (298)
T ss_dssp -------SHHHHHHHHHHCC-CC-C-------CSSSCCCHHHHHHHHHHTCSCTTTSCCHHHHTTC
T ss_pred -------cHHHHHHHHhccc-CC-C-------CCccccCHHHHHHHHHHhhcChhhCCCHHHHhcC
Confidence 2223332222221 11 0 1112344679999999999999999999999753
No 120
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*
Probab=100.00 E-value=6.3e-38 Score=352.66 Aligned_cols=261 Identities=26% Similarity=0.372 Sum_probs=209.7
Q ss_pred ccccceecccCceEEEEEEEc-----CCeEEEEEEeecCc-cccHHHHHHHHHHHhccCCCceeeEeeeecc--CCeEEE
Q 045553 803 FNVQNCIGSGGFGATYKAEII-----PGVVVAVKRLSVGR-FQGVQQFAAEIRTLGRVQHPNLVTLIGYHVS--EAEMFL 874 (1082)
Q Consensus 803 ~~~~~~lg~G~~g~Vy~a~~~-----~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~--~~~~~l 874 (1082)
|++.+.||+|+||+||+|.+. +++.||||++.... ....+.+.+|++++++++||||+++++++.+ ....++
T Consensus 33 ~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~l 112 (318)
T 3lxp_A 33 LKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQL 112 (318)
T ss_dssp EEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTTTEEEE
T ss_pred HhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCCCceEEE
Confidence 488999999999999988643 68999999997653 2445678999999999999999999999986 467899
Q ss_pred EEeecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCC
Q 045553 875 IYNYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGT 954 (1082)
Q Consensus 875 V~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~ 954 (1082)
||||+++++|.+++... .+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++.....
T Consensus 113 v~e~~~~~~L~~~l~~~---~~~~~~~~~i~~~l~~~l~~LH~~---~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~ 186 (318)
T 3lxp_A 113 VMEYVPLGSLRDYLPRH---SIGLAQLLLFAQQICEGMAYLHAQ---HYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPE 186 (318)
T ss_dssp EECCCTTCBHHHHGGGS---CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCGGGCEECCT
T ss_pred EEecccCCcHHHHHhhC---CCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCchheEEEcCCCCEEECCccccccccc
Confidence 99999999999999864 489999999999999999999999 999999999999999999999999999998754
Q ss_pred CCCc--cccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHhCCCCCCCCccC------CCCCccHHHHHHHHHhc
Q 045553 955 SETH--ATTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELISDKKALDPSFCS------FGNGFNIVAWASMLLLQ 1026 (1082)
Q Consensus 955 ~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~elltg~~p~~~~~~~------~~~~~~~~~~~~~~~~~ 1026 (1082)
.... ......|+..|+|||++.+..++.++||||+|+++|||++|+.||...... ..............
T Consensus 187 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 263 (318)
T 3lxp_A 187 GHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTEL--- 263 (318)
T ss_dssp TCSEEEC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCHHHHHHHHHHH---
T ss_pred cccccccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCcccccchhhhhhhcccccchhHHHHHHH---
Confidence 4321 233456888999999999999999999999999999999999998642110 00000000111111
Q ss_pred CCCccccccccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhhC
Q 045553 1027 GRPCEFFTAGLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQLKQIQ 1078 (1082)
Q Consensus 1027 ~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L~~i~ 1078 (1082)
++.......+...+.++.+++.+||+.||++||++.|+++.|+++.
T Consensus 264 ------~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~ 309 (318)
T 3lxp_A 264 ------LERGERLPRPDKCPAEVYHLMKNCWETEASFRPTFENLIPILKTVH 309 (318)
T ss_dssp ------HHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred ------HhcccCCCCCccccHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHH
Confidence 1112222234455678999999999999999999999999998874
No 121
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...
Probab=100.00 E-value=2.8e-37 Score=342.50 Aligned_cols=260 Identities=27% Similarity=0.423 Sum_probs=199.9
Q ss_pred hcCccccceecccCceEEEEEEEcCCeEEEEEEeecCc--cccHHHHHHHHHHHhccCCCceeeEeeeeccCCeEEEEEe
Q 045553 800 TAGFNVQNCIGSGGFGATYKAEIIPGVVVAVKRLSVGR--FQGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFLIYN 877 (1082)
Q Consensus 800 ~~~~~~~~~lg~G~~g~Vy~a~~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~E 877 (1082)
.++|++.++||+|+||+||+|+.. ..||||++.... ....+.+.+|++++++++||||+++++++ .....++|||
T Consensus 23 ~~~y~~~~~lG~G~~g~Vy~~~~~--~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-~~~~~~lv~e 99 (289)
T 3og7_A 23 DGQITVGQRIGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TAPQLAIVTQ 99 (289)
T ss_dssp TTSCEEEEEEEECSSEEEEEEESS--SEEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEE-CSSSCEEEEE
T ss_pred ccceeeeeEecCCCCeEEEEEEEc--CceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeec-cCCccEEEEE
Confidence 467999999999999999999754 469999997553 33457789999999999999999999965 4566899999
Q ss_pred ecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCCCC-
Q 045553 878 YLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGTSE- 956 (1082)
Q Consensus 878 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~- 956 (1082)
|+++++|.+++... ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++......
T Consensus 100 ~~~~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~~L~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 175 (289)
T 3og7_A 100 WCEGSSLYHHLHAS-ETKFEMKKLIDIARQTARGMDYLHAK---SIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSG 175 (289)
T ss_dssp CCCEEEHHHHHTTC----CCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEETTTEEEECCCC----------
T ss_pred ecCCCcHHHHHhhc-cCCCCHHHHHHHHHHHHHHHHHHHhC---CcccccCccceEEECCCCCEEEccceeccccccccc
Confidence 99999999999765 45799999999999999999999999 99999999999999999999999999998654322
Q ss_pred CccccCcccCCCcccchhcc---cCCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCCCcccc
Q 045553 957 THATTDVAGTFGYVAPEYAM---TCRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQGRPCEFF 1033 (1082)
Q Consensus 957 ~~~~~~~~gt~~y~aPE~~~---~~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1033 (1082)
........||+.|+|||++. +..++.++||||+|+++|||++|+.||.... ..... ......+......
T Consensus 176 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~-------~~~~~-~~~~~~~~~~~~~ 247 (289)
T 3og7_A 176 SHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNIN-------NRDQI-IEMVGRGSLSPDL 247 (289)
T ss_dssp --------CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCC-------CHHHH-HHHHHHTSCCCCT
T ss_pred cccccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccc-------hHHHH-HHHhcccccCcch
Confidence 22334467999999999986 5678899999999999999999999996421 11222 2222222222111
Q ss_pred ccccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhhCC
Q 045553 1034 TAGLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQLKQIQP 1079 (1082)
Q Consensus 1034 d~~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L~~i~~ 1079 (1082)
. ......+.++.+++.+|++.+|++||++.|+++.|+++..
T Consensus 248 ~-----~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~l~~ 288 (289)
T 3og7_A 248 S-----KVRSNCPKRMKRLMAECLKKKRDERPSFPRILAEIEELAR 288 (289)
T ss_dssp T-----SSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC
T ss_pred h-----hccccCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHhh
Confidence 1 1123445689999999999999999999999999999864
No 122
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*
Probab=100.00 E-value=1.2e-37 Score=352.75 Aligned_cols=248 Identities=25% Similarity=0.375 Sum_probs=207.0
Q ss_pred HhcCccccceecccCceEEEEEEEc-CCeEEEEEEeecCc---cccHHHHHHHHHHHhcc-CCCceeeEeeeeccCCeEE
Q 045553 799 ATAGFNVQNCIGSGGFGATYKAEII-PGVVVAVKRLSVGR---FQGVQQFAAEIRTLGRV-QHPNLVTLIGYHVSEAEMF 873 (1082)
Q Consensus 799 ~~~~~~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~ 873 (1082)
..++|++.+.||+|+||.||+|+.. +|+.||||+++... ....+.+..|.++++.+ +||||+++++++.+.+..|
T Consensus 15 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~~~~ 94 (345)
T 1xjd_A 15 KIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLF 94 (345)
T ss_dssp -CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEE
T ss_pred ChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCCEEE
Confidence 4578999999999999999999765 58999999997542 23456678899999877 9999999999999999999
Q ss_pred EEEeecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecC
Q 045553 874 LIYNYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLG 953 (1082)
Q Consensus 874 lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~ 953 (1082)
+||||+++|+|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++...
T Consensus 95 lv~E~~~gg~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~ 169 (345)
T 1xjd_A 95 FVMEYLNGGDLMYHIQSC--HKFDLSRATFYAAEIILGLQFLHSK---GIVYRDLKLDNILLDKDGHIKIADFGMCKENM 169 (345)
T ss_dssp EEEECCTTCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCCC
T ss_pred EEEeCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCChhhEEECCCCCEEEeEChhhhhcc
Confidence 999999999999999873 4689999999999999999999999 99999999999999999999999999998643
Q ss_pred CCCCccccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCCCcccc
Q 045553 954 TSETHATTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQGRPCEFF 1033 (1082)
Q Consensus 954 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1033 (1082)
... ......+||+.|+|||++.+..++.++||||+||++|||++|+.||... +..+......... .
T Consensus 170 ~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~--------~~~~~~~~i~~~~-~---- 235 (345)
T 1xjd_A 170 LGD-AKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQ--------DEEELFHSIRMDN-P---- 235 (345)
T ss_dssp CTT-CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCS--------SHHHHHHHHHHCC-C----
T ss_pred cCC-CcccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCCC--------CHHHHHHHHHhCC-C----
Confidence 222 2334568999999999999999999999999999999999999999632 2223333332221 1
Q ss_pred ccccCCCCChHHHHHHHHHHHHcccCCCCCCCCHH-HHH
Q 045553 1034 TAGLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMR-QVA 1071 (1082)
Q Consensus 1034 d~~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~-ev~ 1071 (1082)
..+...+.++.+++.+|++.||++||++. ||.
T Consensus 236 ------~~p~~~s~~~~~li~~lL~~dp~~R~~~~~~i~ 268 (345)
T 1xjd_A 236 ------FYPRWLEKEAKDLLVKLFVREPEKRLGVRGDIR 268 (345)
T ss_dssp ------CCCTTSCHHHHHHHHHHSCSSGGGSBTTBSCGG
T ss_pred ------CCCcccCHHHHHHHHHHhcCCHhHcCCChHHHH
Confidence 12334456899999999999999999997 654
No 123
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}
Probab=100.00 E-value=7.7e-38 Score=361.92 Aligned_cols=264 Identities=20% Similarity=0.230 Sum_probs=212.0
Q ss_pred ccHHHHHHHhcCccccceecccCceEEEEEEEc-CCeEEEEEEeecCc---cccHHHHHHHHHHHhccCCCceeeEeeee
Q 045553 791 LTYENVVRATAGFNVQNCIGSGGFGATYKAEII-PGVVVAVKRLSVGR---FQGVQQFAAEIRTLGRVQHPNLVTLIGYH 866 (1082)
Q Consensus 791 ~~~~~~~~~~~~~~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~ 866 (1082)
+.+++.....++|++.+.||+|+||+||+|+.. +|+.||||++.... ....+.+.+|.+++..++||||+++++++
T Consensus 51 ~~~~~~~~~~~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~ 130 (412)
T 2vd5_A 51 VRLKEVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAF 130 (412)
T ss_dssp HHHHHHSCCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEE
T ss_pred hhhhhccCChhhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEE
Confidence 344555556788999999999999999999764 68999999996532 12234578899999999999999999999
Q ss_pred ccCCeEEEEEeecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeec
Q 045553 867 VSEAEMFLIYNYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDF 946 (1082)
Q Consensus 867 ~~~~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Df 946 (1082)
.+.+..|+||||+++|+|.+++... ...+++..+..++.||+.||+|||+. +|+||||||+||+++.++.+||+||
T Consensus 131 ~~~~~~~lVmE~~~gg~L~~~l~~~-~~~l~~~~~~~~~~qi~~aL~~LH~~---giiHrDLKp~NILld~~g~vkL~DF 206 (412)
T 2vd5_A 131 QDENYLYLVMEYYVGGDLLTLLSKF-GERIPAEMARFYLAEIVMAIDSVHRL---GYVHRDIKPDNILLDRCGHIRLADF 206 (412)
T ss_dssp ECSSEEEEEECCCCSCBHHHHHHHH-SSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCC
T ss_pred eeCCEEEEEEcCCCCCcHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecccCHHHeeecCCCCEEEeec
Confidence 9999999999999999999999864 34699999999999999999999999 9999999999999999999999999
Q ss_pred ccceecCCCCCccccCcccCCCcccchhcc-------cCCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHH
Q 045553 947 GLARLLGTSETHATTDVAGTFGYVAPEYAM-------TCRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAW 1019 (1082)
Q Consensus 947 Gla~~~~~~~~~~~~~~~gt~~y~aPE~~~-------~~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~ 1019 (1082)
|+++.............+||+.|+|||++. +..++.++|||||||++|||++|+.||... +..+.
T Consensus 207 Gla~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~--------~~~~~ 278 (412)
T 2vd5_A 207 GSCLKLRADGTVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYAD--------STAET 278 (412)
T ss_dssp TTCEECCTTSCEECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCS--------SHHHH
T ss_pred hhheeccCCCccccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCC--------CHHHH
Confidence 999887655444444568999999999997 357899999999999999999999999742 22222
Q ss_pred HHHHHhcCCCccccccccCCCCChHHHHHHHHHHHHcccCCCCCC---CCHHHHHHH
Q 045553 1020 ASMLLLQGRPCEFFTAGLWDCGPHDDLIEMLNLAIMCTGESLSSR---PSMRQVAQQ 1073 (1082)
Q Consensus 1020 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~p~~R---Pt~~ev~~~ 1073 (1082)
...+......... + ..+...+.++.+++.+|++ +|++| |++.||.++
T Consensus 279 ~~~i~~~~~~~~~--p----~~~~~~s~~~~dli~~lL~-~p~~Rlgr~~~~ei~~H 328 (412)
T 2vd5_A 279 YGKIVHYKEHLSL--P----LVDEGVPEEARDFIQRLLC-PPETRLGRGGAGDFRTH 328 (412)
T ss_dssp HHHHHTHHHHCCC--C--------CCCHHHHHHHHTTSS-CGGGCTTTTTHHHHHTS
T ss_pred HHHHHhcccCcCC--C----ccccCCCHHHHHHHHHHcC-ChhhcCCCCCHHHHhcC
Confidence 2222221100000 0 0112345689999999999 99998 689998754
No 124
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*
Probab=100.00 E-value=6.2e-38 Score=353.89 Aligned_cols=256 Identities=22% Similarity=0.404 Sum_probs=205.1
Q ss_pred cCccccceecccCceEEEEEEEc-CCe----EEEEEEeecCc-cccHHHHHHHHHHHhccCCCceeeEeeeeccCCeEEE
Q 045553 801 AGFNVQNCIGSGGFGATYKAEII-PGV----VVAVKRLSVGR-FQGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFL 874 (1082)
Q Consensus 801 ~~~~~~~~lg~G~~g~Vy~a~~~-~~~----~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 874 (1082)
.+|++.+.||+|+||+||+|... ++. +||+|.+.... ....+.+.+|+.++++++||||+++++++. ....++
T Consensus 13 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~ 91 (325)
T 3kex_A 13 TELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCP-GSSLQL 91 (325)
T ss_dssp TTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSCSCBCSCCHHHHHHHTCCCTTBCCEEEEEC-BSSEEE
T ss_pred hHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccHHHHHHHHHHHHHHhcCCCCCcCeEEEEEc-CCccEE
Confidence 57899999999999999999754 344 38888875432 233456788999999999999999999886 567899
Q ss_pred EEeecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCC
Q 045553 875 IYNYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGT 954 (1082)
Q Consensus 875 V~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~ 954 (1082)
||||+++|+|.+++... ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++....
T Consensus 92 v~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~ 167 (325)
T 3kex_A 92 VTQYLPLGSLLDHVRQH-RGALGPQLLLNWGVQIAKGMYYLEEH---GMVHRNLAARNVLLKSPSQVQVADFGVADLLPP 167 (325)
T ss_dssp EEECCTTCBSHHHHHSS-GGGSCTTHHHHHHHHHHHHHHHHHHT---TCCCSCCSSTTEEESSSSCEEECSCSGGGGSCC
T ss_pred EEEeCCCCCHHHHHHHc-cccCCHHHHHHHHHHHHHHHHHHHhC---CCCCCccchheEEECCCCeEEECCCCcccccCc
Confidence 99999999999999865 34689999999999999999999999 999999999999999999999999999987754
Q ss_pred CCCc-cccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCccCCCCCccHHHHHHHHHhcCCCccc
Q 045553 955 SETH-ATTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELIS-DKKALDPSFCSFGNGFNIVAWASMLLLQGRPCEF 1032 (1082)
Q Consensus 955 ~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1032 (1082)
.... ......|+..|+|||++.+..++.++||||||+++|||++ |+.||..... ... .. .+..+...
T Consensus 168 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~-----~~~---~~-~~~~~~~~-- 236 (325)
T 3kex_A 168 DDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRL-----AEV---PD-LLEKGERL-- 236 (325)
T ss_dssp CTTCCC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCT-----THH---HH-HHHTTCBC--
T ss_pred ccccccccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCccccCH-----HHH---HH-HHHcCCCC--
Confidence 4332 2344568889999999999999999999999999999999 9999974321 111 11 12222111
Q ss_pred cccccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhhCC
Q 045553 1033 FTAGLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQLKQIQP 1079 (1082)
Q Consensus 1033 ~d~~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L~~i~~ 1079 (1082)
..+...+..+.+++.+||+.+|++||++.|++++|+++..
T Consensus 237 -------~~~~~~~~~~~~li~~~l~~dp~~Rps~~el~~~l~~~~~ 276 (325)
T 3kex_A 237 -------AQPQICTIDVYMVMVKCWMIDENIRPTFKELANEFTRMAR 276 (325)
T ss_dssp -------CCCTTBCTTTTHHHHHHTCSCTTTSCCHHHHHHHHHHHTT
T ss_pred -------CCCCcCcHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHh
Confidence 1122334468889999999999999999999999998754
No 125
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2.9e-37 Score=342.02 Aligned_cols=255 Identities=25% Similarity=0.416 Sum_probs=210.1
Q ss_pred cCccccc-eecccCceEEEEEEEc---CCeEEEEEEeecCc-cccHHHHHHHHHHHhccCCCceeeEeeeeccCCeEEEE
Q 045553 801 AGFNVQN-CIGSGGFGATYKAEII---PGVVVAVKRLSVGR-FQGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFLI 875 (1082)
Q Consensus 801 ~~~~~~~-~lg~G~~g~Vy~a~~~---~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV 875 (1082)
++|.+.+ .||+|+||.||+|... ++..||||++.... ....+.+.+|++++++++||||+++++++ ..+..++|
T Consensus 9 ~~~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-~~~~~~lv 87 (287)
T 1u59_A 9 DNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVC-QAEALMLV 87 (287)
T ss_dssp GGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-ESSSEEEE
T ss_pred HHhhhhhccccccCceeEEEeEeccCCCcceEEEEecCCccchhHHHHHHHHHHHHHhCCCCCEeEEEEEe-cCCCcEEE
Confidence 4566665 9999999999999653 57889999997643 34567789999999999999999999999 55679999
Q ss_pred EeecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCCC
Q 045553 876 YNYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGTS 955 (1082)
Q Consensus 876 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~ 955 (1082)
|||+++++|.+++... ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++......
T Consensus 88 ~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~ 163 (287)
T 1u59_A 88 MEMAGGGPLHKFLVGK-REEIPVSNVAELLHQVSMGMKYLEEK---NFVHRDLAARNVLLVNRHYAKISDFGLSKALGAD 163 (287)
T ss_dssp EECCTTEEHHHHHTTC-TTTSCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEEETTEEEECCCTTCEECTTC
T ss_pred EEeCCCCCHHHHHHhC-CccCCHHHHHHHHHHHHHHHHHHHHC---CEeeCCCchheEEEcCCCCEEECcccceeeeccC
Confidence 9999999999999754 45699999999999999999999999 9999999999999999999999999999887544
Q ss_pred CCc--cccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCccCCCCCccHHHHHHHHHhcCCCccc
Q 045553 956 ETH--ATTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELIS-DKKALDPSFCSFGNGFNIVAWASMLLLQGRPCEF 1032 (1082)
Q Consensus 956 ~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1032 (1082)
... ......|++.|+|||++.+..++.++||||||+++|||++ |+.||.... . .+.... +..+..
T Consensus 164 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~-----~---~~~~~~-i~~~~~--- 231 (287)
T 1u59_A 164 DSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMK-----G---PEVMAF-IEQGKR--- 231 (287)
T ss_dssp SCEECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCC-----T---HHHHHH-HHTTCC---
T ss_pred cceeeccccccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCC-----H---HHHHHH-HhcCCc---
Confidence 332 2233456889999999998899999999999999999998 999986421 1 122222 222211
Q ss_pred cccccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhhC
Q 045553 1033 FTAGLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQLKQIQ 1078 (1082)
Q Consensus 1033 ~d~~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L~~i~ 1078 (1082)
...+...+..+.+++.+|++.+|++||++.|++++|+++.
T Consensus 232 ------~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~ 271 (287)
T 1u59_A 232 ------MECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACY 271 (287)
T ss_dssp ------CCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred ------CCCCCCcCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 1223445678999999999999999999999999998763
No 126
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Probab=100.00 E-value=3.3e-37 Score=353.74 Aligned_cols=246 Identities=24% Similarity=0.275 Sum_probs=201.3
Q ss_pred cceecccCceEEEEEEE-cCCeEEEEEEeecCccccHHHHHHHHHHHhccCCCceeeEeeeeccCCeEEEEEeecCCCCH
Q 045553 806 QNCIGSGGFGATYKAEI-IPGVVVAVKRLSVGRFQGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFLIYNYLPGGNL 884 (1082)
Q Consensus 806 ~~~lg~G~~g~Vy~a~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~~~~gsL 884 (1082)
.+.||+|+||.||+|.. .+|+.||+|++........+.+.+|++++++++||||+++++++.+.+..++||||+++++|
T Consensus 94 ~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~~~~~L 173 (373)
T 2x4f_A 94 TEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGEL 173 (373)
T ss_dssp EEECC-----CEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCTTCEE
T ss_pred ceEEecCcCEEEEEEEEcCCCcEEEEEEEcccccccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCCCCCcH
Confidence 57899999999999975 46899999999877666678899999999999999999999999999999999999999999
Q ss_pred HHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEE--cCCCcEEEeecccceecCCCCCccccC
Q 045553 885 EKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILL--DNNLNAYLSDFGLARLLGTSETHATTD 962 (1082)
Q Consensus 885 ~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill--~~~~~~kl~DfGla~~~~~~~~~~~~~ 962 (1082)
.+++... ...+++..+..++.|++.||+|||+. +|+||||||+||++ +.++.+||+|||+++.+..... ...
T Consensus 174 ~~~l~~~-~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~~~--~~~ 247 (373)
T 2x4f_A 174 FDRIIDE-SYNLTELDTILFMKQICEGIRHMHQM---YILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREK--LKV 247 (373)
T ss_dssp HHHHHHT-GGGCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEETTTTEEEECCCSSCEECCTTCB--CCC
T ss_pred HHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHHEEEecCCCCcEEEEeCCCceecCCccc--ccc
Confidence 9998764 34689999999999999999999999 99999999999999 5678999999999998754332 234
Q ss_pred cccCCCcccchhcccCCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCCCccccccccCCCCC
Q 045553 963 VAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQGRPCEFFTAGLWDCGP 1042 (1082)
Q Consensus 963 ~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~ 1042 (1082)
..||+.|+|||++.+..++.++|||||||++|||++|+.||... ................. .. ..
T Consensus 248 ~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~--------~~~~~~~~i~~~~~~~~---~~----~~ 312 (373)
T 2x4f_A 248 NFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGD--------NDAETLNNILACRWDLE---DE----EF 312 (373)
T ss_dssp CCSSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCCS--------SHHHHHHHHHHTCCCSC---SG----GG
T ss_pred ccCCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCCC--------CHHHHHHHHHhccCCCC---hh----hh
Confidence 56999999999999999999999999999999999999999632 22333333333221110 00 01
Q ss_pred hHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 045553 1043 HDDLIEMLNLAIMCTGESLSSRPSMRQVAQ 1072 (1082)
Q Consensus 1043 ~~~~~~l~~li~~cl~~~p~~RPt~~ev~~ 1072 (1082)
...+.++.+++.+|++.||++||++.|+++
T Consensus 313 ~~~~~~~~~li~~~L~~dp~~Rps~~e~l~ 342 (373)
T 2x4f_A 313 QDISEEAKEFISKLLIKEKSWRISASEALK 342 (373)
T ss_dssp TTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred ccCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 233568999999999999999999999987
No 127
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}
Probab=100.00 E-value=1.9e-37 Score=348.85 Aligned_cols=263 Identities=23% Similarity=0.308 Sum_probs=211.3
Q ss_pred hcCccccceecccCceEEEEEEE-cCCeEEEEEEeecCccccHHHHHHHHHHHhccCCCceeeEeeeec----cCCeEEE
Q 045553 800 TAGFNVQNCIGSGGFGATYKAEI-IPGVVVAVKRLSVGRFQGVQQFAAEIRTLGRVQHPNLVTLIGYHV----SEAEMFL 874 (1082)
Q Consensus 800 ~~~~~~~~~lg~G~~g~Vy~a~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~----~~~~~~l 874 (1082)
.++|++.+.||+|+||.||+|+. .+++.||||++........+.+.+|+++++.++||||+++++++. .....++
T Consensus 28 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~l 107 (317)
T 2buj_A 28 NKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEAWL 107 (317)
T ss_dssp TEEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTEEEEEE
T ss_pred CeEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecCCHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCCceeEE
Confidence 35799999999999999999976 568999999997766666788999999999999999999999986 3457899
Q ss_pred EEeecCCCCHHHHHhhC--CCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceec
Q 045553 875 IYNYLPGGNLEKFIQDR--PRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLL 952 (1082)
Q Consensus 875 V~E~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~ 952 (1082)
||||+++|+|.+++... ....+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||.+...
T Consensus 108 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~dfg~~~~~ 184 (317)
T 2buj_A 108 LLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAK---GYAHRDLKPTNILLGDEGQPVLMDLGSMNQA 184 (317)
T ss_dssp EEECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCSSCEES
T ss_pred EEEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEcCCCCEEEEecCcchhc
Confidence 99999999999999763 245799999999999999999999999 9999999999999999999999999998765
Q ss_pred CCCCCc--------cccCcccCCCcccchhcccCC---CCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHH
Q 045553 953 GTSETH--------ATTDVAGTFGYVAPEYAMTCR---VSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWAS 1021 (1082)
Q Consensus 953 ~~~~~~--------~~~~~~gt~~y~aPE~~~~~~---~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~ 1021 (1082)
...... ......|++.|+|||++.+.. ++.++||||||+++|||++|+.||...... .......
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~---~~~~~~~-- 259 (317)
T 2buj_A 185 CIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQK---GDSVALA-- 259 (317)
T ss_dssp CEEEESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHHHHHT---TSCHHHH--
T ss_pred ccccccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhhhhcc---cchhhHH--
Confidence 321111 112345799999999987654 688999999999999999999998642211 1111111
Q ss_pred HHHhcCCCccccccccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhhCCCC
Q 045553 1022 MLLLQGRPCEFFTAGLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQLKQIQPPA 1081 (1082)
Q Consensus 1022 ~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L~~i~~~~ 1081 (1082)
.... .....+...+..+.+++.+|++.||++||++.|++++|+.++++.
T Consensus 260 --~~~~---------~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~~~~~~ 308 (317)
T 2buj_A 260 --VQNQ---------LSIPQSPRHSSALWQLLNSMMTVDPHQRPHIPLLLSQLEALQPPA 308 (317)
T ss_dssp --HHCC-----------CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTCCCC
T ss_pred --hhcc---------CCCCccccCCHHHHHHHHHHhhcChhhCCCHHHHHHHhhhcCCCC
Confidence 1111 111112344568999999999999999999999999999998764
No 128
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}
Probab=100.00 E-value=4.2e-37 Score=352.34 Aligned_cols=249 Identities=26% Similarity=0.361 Sum_probs=207.1
Q ss_pred cCccccceecccCceEEEEEEEc-CCeEEEEEEeecCc---cccHHHHHHHHHHHhccCCCceeeEeeeeccCCeEEEEE
Q 045553 801 AGFNVQNCIGSGGFGATYKAEII-PGVVVAVKRLSVGR---FQGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFLIY 876 (1082)
Q Consensus 801 ~~~~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 876 (1082)
++|++.+.||+|+||.||+|... +++.||+|++.... ....+.+.+|+++++.++||||+++++++.+....++||
T Consensus 15 ~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lv~ 94 (384)
T 4fr4_A 15 DHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMVV 94 (384)
T ss_dssp GGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEE
Confidence 56999999999999999999755 58899999986532 244577889999999999999999999999999999999
Q ss_pred eecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCCCC
Q 045553 877 NYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGTSE 956 (1082)
Q Consensus 877 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~ 956 (1082)
||+++|+|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.+...
T Consensus 95 e~~~gg~L~~~l~~~--~~l~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~- 168 (384)
T 4fr4_A 95 DLLLGGDLRYHLQQN--VHFKEETVKLFICELVMALDYLQNQ---RIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRE- 168 (384)
T ss_dssp CCCTTEEHHHHHHTT--CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECCTT-
T ss_pred ecCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCcHHHeEECCCCCEEEeccceeeeccCC-
Confidence 999999999999863 4699999999999999999999999 9999999999999999999999999999876433
Q ss_pred CccccCcccCCCcccchhccc---CCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCCCcccc
Q 045553 957 THATTDVAGTFGYVAPEYAMT---CRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQGRPCEFF 1033 (1082)
Q Consensus 957 ~~~~~~~~gt~~y~aPE~~~~---~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1033 (1082)
.......||+.|+|||++.+ ..++.++||||+||++|||++|+.||.... ...............
T Consensus 169 -~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~-----~~~~~~~~~~~~~~~------ 236 (384)
T 4fr4_A 169 -TQITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRS-----STSSKEIVHTFETTV------ 236 (384)
T ss_dssp -CCBCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCT-----TSCHHHHHHHHHHCC------
T ss_pred -CceeccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCCC-----CccHHHHHHHHhhcc------
Confidence 23345689999999999974 458899999999999999999999997432 122223222222111
Q ss_pred ccccCCCCChHHHHHHHHHHHHcccCCCCCCCC-HHHHHH
Q 045553 1034 TAGLWDCGPHDDLIEMLNLAIMCTGESLSSRPS-MRQVAQ 1072 (1082)
Q Consensus 1034 d~~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt-~~ev~~ 1072 (1082)
...+...+..+.+++.+|++.+|++||+ +.+|.+
T Consensus 237 -----~~~p~~~s~~~~~li~~lL~~dP~~R~s~~~~l~~ 271 (384)
T 4fr4_A 237 -----VTYPSAWSQEMVSLLKKLLEPNPDQRFSQLSDVQN 271 (384)
T ss_dssp -----CCCCTTSCHHHHHHHHHHSCSSGGGSCCSHHHHHT
T ss_pred -----cCCCCcCCHHHHHHHHHHhcCCHhHhcccHHHHHc
Confidence 1233445678999999999999999998 666654
No 129
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Probab=100.00 E-value=3.8e-37 Score=350.92 Aligned_cols=254 Identities=22% Similarity=0.307 Sum_probs=206.4
Q ss_pred hcCccccceecccCceEEEEEEEc-CCeEEEEEEeecCc-----cccHHHHHHHHHHHhccCCCceeeEeeeeccCCeEE
Q 045553 800 TAGFNVQNCIGSGGFGATYKAEII-PGVVVAVKRLSVGR-----FQGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMF 873 (1082)
Q Consensus 800 ~~~~~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~-----~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 873 (1082)
.++|++.+.||+|+||+||+|... +++.||||++.... ....+.+.+|+++++.++||||+++++++.+.+..+
T Consensus 23 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~ 102 (351)
T 3c0i_A 23 EDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLY 102 (351)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEE
T ss_pred ccceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEE
Confidence 356999999999999999999654 68999999986432 124678999999999999999999999999999999
Q ss_pred EEEeecCCCCHHHHHhhCC--CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCc---EEEeeccc
Q 045553 874 LIYNYLPGGNLEKFIQDRP--RRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLN---AYLSDFGL 948 (1082)
Q Consensus 874 lV~E~~~~gsL~~~l~~~~--~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~---~kl~DfGl 948 (1082)
+||||+++++|.+++.... ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++. +||+|||+
T Consensus 103 lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivHrDlkp~NIl~~~~~~~~~vkl~Dfg~ 179 (351)
T 3c0i_A 103 MVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDN---NIIHRDVKPHCVLLASKENSAPVKLGGFGV 179 (351)
T ss_dssp EEEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECSSSTTCCEEECCCTT
T ss_pred EEEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCChHHeEEecCCCCCcEEEecCcc
Confidence 9999999999998886532 34589999999999999999999999 9999999999999986654 99999999
Q ss_pred ceecCCCCCccccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCC
Q 045553 949 ARLLGTSETHATTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQGR 1028 (1082)
Q Consensus 949 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 1028 (1082)
++....... ......||+.|+|||++.+..++.++||||+||++|||++|+.||.... ......... +.
T Consensus 180 a~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~---------~~~~~~i~~-~~ 248 (351)
T 3c0i_A 180 AIQLGESGL-VAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTK---------ERLFEGIIK-GK 248 (351)
T ss_dssp CEECCTTSC-BCCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCSSH---------HHHHHHHHH-TC
T ss_pred eeEecCCCe-eecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCCCCCcH---------HHHHHHHHc-CC
Confidence 988754332 2344679999999999999999999999999999999999999997421 122222222 21
Q ss_pred CccccccccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 045553 1029 PCEFFTAGLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQ 1073 (1082)
Q Consensus 1029 ~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~ 1073 (1082)
.. ..+... ...+.++.+++.+|++.||++||++.|++++
T Consensus 249 ~~--~~~~~~----~~~s~~~~~li~~~L~~dP~~R~s~~e~l~h 287 (351)
T 3c0i_A 249 YK--MNPRQW----SHISESAKDLVRRMLMLDPAERITVYEALNH 287 (351)
T ss_dssp CC--CCHHHH----TTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred CC--CCcccc----ccCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 11 000000 1234678999999999999999999999863
No 130
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...
Probab=100.00 E-value=1.9e-37 Score=349.65 Aligned_cols=265 Identities=20% Similarity=0.334 Sum_probs=216.8
Q ss_pred HHHHHhcCccccceecccCceEEEEEEEc------CCeEEEEEEeecCc-cccHHHHHHHHHHHhccCCCceeeEeeeec
Q 045553 795 NVVRATAGFNVQNCIGSGGFGATYKAEII------PGVVVAVKRLSVGR-FQGVQQFAAEIRTLGRVQHPNLVTLIGYHV 867 (1082)
Q Consensus 795 ~~~~~~~~~~~~~~lg~G~~g~Vy~a~~~------~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~ 867 (1082)
+.....++|++.+.||+|+||.||+|... +++.||||++.... ......+.+|++++++++||||+++++++.
T Consensus 19 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~ 98 (322)
T 1p4o_A 19 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVS 98 (322)
T ss_dssp TTBCCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEEC
T ss_pred hhcchhhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHHHHHhcCCCCEeeeEEEEc
Confidence 33345678999999999999999999654 36889999997543 234567899999999999999999999999
Q ss_pred cCCeEEEEEeecCCCCHHHHHhhCC--------CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCC
Q 045553 868 SEAEMFLIYNYLPGGNLEKFIQDRP--------RRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNL 939 (1082)
Q Consensus 868 ~~~~~~lV~E~~~~gsL~~~l~~~~--------~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~ 939 (1082)
+....++||||+++|+|.++++... ...+++..++.++.|++.||+|||+. +|+||||||+||+++.++
T Consensus 99 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~NIli~~~~ 175 (322)
T 1p4o_A 99 QGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDF 175 (322)
T ss_dssp SSSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCSGGGEEECTTC
T ss_pred cCCccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHC---CCccCCCccceEEEcCCC
Confidence 9999999999999999999997532 24579999999999999999999999 999999999999999999
Q ss_pred cEEEeecccceecCCCCC-ccccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCccCCCCCccHH
Q 045553 940 NAYLSDFGLARLLGTSET-HATTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELIS-DKKALDPSFCSFGNGFNIV 1017 (1082)
Q Consensus 940 ~~kl~DfGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~ellt-g~~p~~~~~~~~~~~~~~~ 1017 (1082)
.+||+|||+++....... .......|++.|+|||++.+..++.++||||+|+++|||++ |+.||... ...
T Consensus 176 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~--------~~~ 247 (322)
T 1p4o_A 176 TVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGL--------SNE 247 (322)
T ss_dssp CEEECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTS--------CHH
T ss_pred eEEECcCccccccccccccccccCCCCCCCccChhhhccCCCCchhhHHHHHHHHHHHHhcCCCccccC--------CHH
Confidence 999999999986643322 12233457889999999999999999999999999999999 88888632 222
Q ss_pred HHHHHHHhcCCCccccccccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhhCCC
Q 045553 1018 AWASMLLLQGRPCEFFTAGLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQLKQIQPP 1080 (1082)
Q Consensus 1018 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L~~i~~~ 1080 (1082)
+....... +... ..+...+..+.+++.+|++.+|++||++.|++++|+++..+
T Consensus 248 ~~~~~~~~-~~~~---------~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~~L~~~~~~ 300 (322)
T 1p4o_A 248 QVLRFVME-GGLL---------DKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEMEP 300 (322)
T ss_dssp HHHHHHHT-TCCC---------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGGSCT
T ss_pred HHHHHHHc-CCcC---------CCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHhhcc
Confidence 33333322 2211 12334456899999999999999999999999999987654
No 131
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A
Probab=100.00 E-value=6.5e-37 Score=340.10 Aligned_cols=260 Identities=21% Similarity=0.296 Sum_probs=204.5
Q ss_pred cCccccceecccCceEEEEEEEc-CCeEEEEEEeecCcc--ccHHHHHHHHHHHhccCCCceeeEeeeeccCCeEEEEEe
Q 045553 801 AGFNVQNCIGSGGFGATYKAEII-PGVVVAVKRLSVGRF--QGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFLIYN 877 (1082)
Q Consensus 801 ~~~~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~E 877 (1082)
++|++.+.||+|+||+||+|... +++.||||++..... ...+.+.+|++++++++||||+++++++.+.+..++|||
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 81 (292)
T 3o0g_A 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFE 81 (292)
T ss_dssp CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred CCceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCCEEEEEEe
Confidence 47999999999999999999765 589999999975432 335678899999999999999999999999999999999
Q ss_pred ecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCCCCC
Q 045553 878 YLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGTSET 957 (1082)
Q Consensus 878 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~ 957 (1082)
|+++ ++.+++... ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.......
T Consensus 82 ~~~~-~l~~~~~~~-~~~l~~~~~~~~~~ql~~~l~~lH~~---~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 156 (292)
T 3o0g_A 82 FCDQ-DLKKYFDSC-NGDLDPEIVKSFLFQLLKGLGFCHSR---NVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVR 156 (292)
T ss_dssp CCSE-EHHHHHHHT-TTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECCSCCS
T ss_pred cCCC-CHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEeecccceecCCccc
Confidence 9964 666666554 35699999999999999999999999 999999999999999999999999999987653322
Q ss_pred ccccCcccCCCcccchhcccCC-CCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHh---cCCCccc-
Q 045553 958 HATTDVAGTFGYVAPEYAMTCR-VSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLL---QGRPCEF- 1032 (1082)
Q Consensus 958 ~~~~~~~gt~~y~aPE~~~~~~-~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~- 1032 (1082)
......||+.|+|||++.+.. ++.++||||+||++|||++|+.||... ............ ......+
T Consensus 157 -~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~-------~~~~~~~~~i~~~~~~~~~~~~~ 228 (292)
T 3o0g_A 157 -CYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPG-------NDVDDQLKRIFRLLGTPTEEQWP 228 (292)
T ss_dssp -CCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCC-------SSHHHHHHHHHHHHCCCCTTTCT
T ss_pred -cccCCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCC-------CCHHHHHHHHHHHhCCCChhhhh
Confidence 234457899999999998766 799999999999999999999886432 112222222211 1100000
Q ss_pred --cc------------cccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 045553 1033 --FT------------AGLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQ 1073 (1082)
Q Consensus 1033 --~d------------~~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~ 1073 (1082)
.+ ..............+.+++.+|++.||++|||+.|++++
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 283 (292)
T 3o0g_A 229 SMTKLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQH 283 (292)
T ss_dssp TGGGSTTCCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred hhcccccccccccccCCcchhhcccccChHHHHHHHHHhccChhhCCCHHHHhcC
Confidence 00 000001122355788999999999999999999999873
No 132
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*
Probab=100.00 E-value=5.2e-37 Score=346.31 Aligned_cols=249 Identities=24% Similarity=0.345 Sum_probs=198.4
Q ss_pred hcCccccceecccCceEEEEEEE----cCCeEEEEEEeecCc----cccHHHHHHHHHHHhccCCCceeeEeeeeccCCe
Q 045553 800 TAGFNVQNCIGSGGFGATYKAEI----IPGVVVAVKRLSVGR----FQGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAE 871 (1082)
Q Consensus 800 ~~~~~~~~~lg~G~~g~Vy~a~~----~~~~~vavK~~~~~~----~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~ 871 (1082)
.++|++.+.||+|+||.||+|+. .+++.||+|++.... ......+.+|++++++++||||+++++++.+.+.
T Consensus 16 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~ 95 (327)
T 3a62_A 16 PECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGK 95 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEECSSC
T ss_pred HHHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEcCCE
Confidence 35799999999999999999976 478999999997542 2334567889999999999999999999999999
Q ss_pred EEEEEeecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeeccccee
Q 045553 872 MFLIYNYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARL 951 (1082)
Q Consensus 872 ~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~ 951 (1082)
.++||||+++++|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.
T Consensus 96 ~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~ 170 (327)
T 3a62_A 96 LYLILEYLSGGELFMQLERE--GIFMEDTACFYLAEISMALGHLHQK---GIIYRDLKPENIMLNHQGHVKLTDFGLCKE 170 (327)
T ss_dssp EEEEEECCTTEEHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCTTTEEECTTSCEEECCCSCC--
T ss_pred EEEEEeCCCCCcHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHhC---CEEcccCCHHHeEECCCCcEEEEeCCcccc
Confidence 99999999999999999864 4689999999999999999999999 999999999999999999999999999976
Q ss_pred cCCCCCccccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCCCcc
Q 045553 952 LGTSETHATTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQGRPCE 1031 (1082)
Q Consensus 952 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1031 (1082)
...... ......||+.|+|||++.+..++.++||||||+++|||++|+.||... ............. .
T Consensus 171 ~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~--------~~~~~~~~i~~~~-~-- 238 (327)
T 3a62_A 171 SIHDGT-VTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGE--------NRKKTIDKILKCK-L-- 238 (327)
T ss_dssp ---------CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCS--------SHHHHHHHHHHTC-C--
T ss_pred cccCCc-cccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCCCC--------CHHHHHHHHHhCC-C--
Confidence 433222 233457999999999999999999999999999999999999999732 2223333332221 1
Q ss_pred ccccccCCCCChHHHHHHHHHHHHcccCCCCCCC-----CHHHHHHH
Q 045553 1032 FFTAGLWDCGPHDDLIEMLNLAIMCTGESLSSRP-----SMRQVAQQ 1073 (1082)
Q Consensus 1032 ~~d~~l~~~~~~~~~~~l~~li~~cl~~~p~~RP-----t~~ev~~~ 1073 (1082)
..+...+.++.+++.+|++.+|++|| ++.|++++
T Consensus 239 --------~~p~~~~~~~~~li~~~L~~dp~~R~~~~~~~~~e~l~h 277 (327)
T 3a62_A 239 --------NLPPYLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQAH 277 (327)
T ss_dssp --------CCCTTSCHHHHHHHHHHSCSCGGGSTTSSTTTHHHHHHS
T ss_pred --------CCCCCCCHHHHHHHHHHHhcCHhhccCCCCCCHHHHHcC
Confidence 12334456899999999999999999 77787653
No 133
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*
Probab=100.00 E-value=5.5e-37 Score=348.37 Aligned_cols=250 Identities=22% Similarity=0.296 Sum_probs=208.0
Q ss_pred HhcCccccceecccCceEEEEEEEc-CCeEEEEEEeecCc---cccHHHHHHHHHHHhcc-CCCceeeEeeeeccCCeEE
Q 045553 799 ATAGFNVQNCIGSGGFGATYKAEII-PGVVVAVKRLSVGR---FQGVQQFAAEIRTLGRV-QHPNLVTLIGYHVSEAEMF 873 (1082)
Q Consensus 799 ~~~~~~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~ 873 (1082)
..++|++.+.||+|+||+||+|+.. +++.||||++.... ....+.+..|.++++.+ +||+|+++++++.+.+..|
T Consensus 18 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~ 97 (353)
T 2i0e_A 18 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLY 97 (353)
T ss_dssp -CTTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSEEE
T ss_pred chHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCEEE
Confidence 3467999999999999999999765 47899999997542 24456788999999988 8999999999999999999
Q ss_pred EEEeecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecC
Q 045553 874 LIYNYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLG 953 (1082)
Q Consensus 874 lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~ 953 (1082)
+||||+++|+|.+++... ..+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++...
T Consensus 98 lv~E~~~gg~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~vkL~DFG~a~~~~ 172 (353)
T 2i0e_A 98 FVMEYVNGGDLMYHIQQV--GRFKEPHAVFYAAEIAIGLFFLQSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCKENI 172 (353)
T ss_dssp EEEECCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCCC
T ss_pred EEEeCCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CEEeccCCHHHEEEcCCCcEEEEeCCcccccc
Confidence 999999999999999864 4699999999999999999999999 99999999999999999999999999998643
Q ss_pred CCCCccccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCCCcccc
Q 045553 954 TSETHATTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQGRPCEFF 1033 (1082)
Q Consensus 954 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1033 (1082)
... ......+||+.|+|||++.+..++.++||||+||++|||++|+.||... +..+....+.... .
T Consensus 173 ~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~--------~~~~~~~~i~~~~-~---- 238 (353)
T 2i0e_A 173 WDG-VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGE--------DEDELFQSIMEHN-V---- 238 (353)
T ss_dssp CTT-CCBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCCS--------SHHHHHHHHHHCC-C----
T ss_pred cCC-cccccccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCCC--------CHHHHHHHHHhCC-C----
Confidence 222 2334567999999999999999999999999999999999999999632 2233333333321 1
Q ss_pred ccccCCCCChHHHHHHHHHHHHcccCCCCCCCC-----HHHHHHH
Q 045553 1034 TAGLWDCGPHDDLIEMLNLAIMCTGESLSSRPS-----MRQVAQQ 1073 (1082)
Q Consensus 1034 d~~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt-----~~ev~~~ 1073 (1082)
..|...+.++.+++.+|++.+|++||+ +.||.++
T Consensus 239 ------~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~i~~h 277 (353)
T 2i0e_A 239 ------AYPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEH 277 (353)
T ss_dssp ------CCCTTSCHHHHHHHHHHTCSCTTSCTTCSTTHHHHHHTS
T ss_pred ------CCCCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcC
Confidence 123345578999999999999999995 5676643
No 134
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}
Probab=100.00 E-value=8.6e-37 Score=341.92 Aligned_cols=260 Identities=21% Similarity=0.304 Sum_probs=203.4
Q ss_pred hcCccccceecccCceEEEEEEEc-CCeEEEEEEeecCcc---ccHHHHHHHHHHHhccCCCceeeEeeeeccCCeEEEE
Q 045553 800 TAGFNVQNCIGSGGFGATYKAEII-PGVVVAVKRLSVGRF---QGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFLI 875 (1082)
Q Consensus 800 ~~~~~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV 875 (1082)
.++|++.+.||+|+||.||+|... +++.||+|++..... ...+.+.+|++++++++||||+++++++...+..++|
T Consensus 33 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv 112 (309)
T 2h34_A 33 FGPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDGQLYVD 112 (309)
T ss_dssp -CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEE
T ss_pred eccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCCeEEEE
Confidence 468999999999999999999765 689999999875432 2346789999999999999999999999999999999
Q ss_pred EeecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCCC
Q 045553 876 YNYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGTS 955 (1082)
Q Consensus 876 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~ 955 (1082)
|||+++++|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++......
T Consensus 113 ~e~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~ 187 (309)
T 2h34_A 113 MRLINGVDLAAMLRRQ--GPLAPPRAVAIVRQIGSALDAAHAA---GATHRDVKPENILVSADDFAYLVDFGIASATTDE 187 (309)
T ss_dssp EECCCCEEHHHHHHHH--CSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECSCCC-------
T ss_pred EEecCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---cCCcCCCChHHEEEcCCCCEEEecCccCcccccc
Confidence 9999999999999874 4689999999999999999999999 9999999999999999999999999999876544
Q ss_pred CCccccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCCCcccccc
Q 045553 956 ETHATTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQGRPCEFFTA 1035 (1082)
Q Consensus 956 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 1035 (1082)
.........|++.|+|||++.+..++.++||||||+++|||++|+.||... .. ..+............
T Consensus 188 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~--------~~-~~~~~~~~~~~~~~~--- 255 (309)
T 2h34_A 188 KLTQLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQGD--------QL-SVMGAHINQAIPRPS--- 255 (309)
T ss_dssp ---------CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCSC--------HH-HHHHHHHHSCCCCGG---
T ss_pred ccccccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCCc--------hH-HHHHHHhccCCCCcc---
Confidence 433444567999999999999999999999999999999999999999632 11 122222222211100
Q ss_pred ccCCCCChHHHHHHHHHHHHcccCCCCCCC-CHHHHHHHHhhhCCC
Q 045553 1036 GLWDCGPHDDLIEMLNLAIMCTGESLSSRP-SMRQVAQQLKQIQPP 1080 (1082)
Q Consensus 1036 ~l~~~~~~~~~~~l~~li~~cl~~~p~~RP-t~~ev~~~L~~i~~~ 1080 (1082)
..+...+.++.+++.+|++.||++|| ++.++++.|+++...
T Consensus 256 ----~~~~~~~~~l~~li~~~l~~dP~~Rp~s~~~l~~~l~~~l~~ 297 (309)
T 2h34_A 256 ----TVRPGIPVAFDAVIARGMAKNPEDRYVTCGDLSAAAHAALAT 297 (309)
T ss_dssp ----GTSTTCCTHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHTCC-
T ss_pred ----ccCCCCCHHHHHHHHHhccCCHHHHHHhHHHHHHHHHHHHHh
Confidence 11223445799999999999999999 999999999987654
No 135
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=9.2e-37 Score=345.32 Aligned_cols=256 Identities=26% Similarity=0.415 Sum_probs=204.6
Q ss_pred cCccccceecccCceEEEEEEEcC-----CeEEEEEEeecCc-cccHHHHHHHHHHHhccCCCceeeEeeeeccCCeEEE
Q 045553 801 AGFNVQNCIGSGGFGATYKAEIIP-----GVVVAVKRLSVGR-FQGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFL 874 (1082)
Q Consensus 801 ~~~~~~~~lg~G~~g~Vy~a~~~~-----~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 874 (1082)
.+|++.+.||+|+||.||+|.... +..||||++.... ......+.+|++++++++||||+++++++.+.+..++
T Consensus 44 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 123 (333)
T 1mqb_A 44 SCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMI 123 (333)
T ss_dssp TTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEE
T ss_pred HHhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCCcEE
Confidence 468888999999999999996543 2469999997543 2345678999999999999999999999999999999
Q ss_pred EEeecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCC
Q 045553 875 IYNYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGT 954 (1082)
Q Consensus 875 V~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~ 954 (1082)
||||+++++|.+++... ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++....
T Consensus 124 v~e~~~~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~ 199 (333)
T 1mqb_A 124 ITEYMENGALDKFLREK-DGEFSVLQLVGMLRGIAAGMKYLANM---NYVHRDLAARNILVNSNLVCKVSDFGLSRVLED 199 (333)
T ss_dssp EEECCTTEEHHHHHHHT-TTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCCCC------
T ss_pred EEeCCCCCcHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChheEEECCCCcEEECCCCcchhhcc
Confidence 99999999999999875 45799999999999999999999999 999999999999999999999999999987654
Q ss_pred CCCc--cccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCccCCCCCccHHHHHHHHHhcCCCcc
Q 045553 955 SETH--ATTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELIS-DKKALDPSFCSFGNGFNIVAWASMLLLQGRPCE 1031 (1082)
Q Consensus 955 ~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1031 (1082)
.... ......++..|+|||++.+..++.++||||||+++|||++ |+.||... ...+...... .+..
T Consensus 200 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~--------~~~~~~~~~~-~~~~-- 268 (333)
T 1mqb_A 200 DPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWEL--------SNHEVMKAIN-DGFR-- 268 (333)
T ss_dssp -----------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTC--------CHHHHHHHHH-TTCC--
T ss_pred ccccccccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCcccC--------CHHHHHHHHH-CCCc--
Confidence 3221 2223346788999999999999999999999999999999 99998632 1222222222 2211
Q ss_pred ccccccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhhC
Q 045553 1032 FFTAGLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQLKQIQ 1078 (1082)
Q Consensus 1032 ~~d~~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L~~i~ 1078 (1082)
...+...+..+.+++.+||+.+|++||++.|++++|+++.
T Consensus 269 -------~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~ 308 (333)
T 1mqb_A 269 -------LPTPMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKLI 308 (333)
T ss_dssp -------CCCCTTCBHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHH
T ss_pred -------CCCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 1123345568999999999999999999999999998764
No 136
>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.9e-36 Score=343.87 Aligned_cols=269 Identities=23% Similarity=0.344 Sum_probs=206.0
Q ss_pred HHhcCccccceecccCceEEEEEEEcCCeEEEEEEeecCccccHHHHHHHHHHHhcc--CCCceeeEeeeeccC----Ce
Q 045553 798 RATAGFNVQNCIGSGGFGATYKAEIIPGVVVAVKRLSVGRFQGVQQFAAEIRTLGRV--QHPNLVTLIGYHVSE----AE 871 (1082)
Q Consensus 798 ~~~~~~~~~~~lg~G~~g~Vy~a~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l--~h~niv~l~~~~~~~----~~ 871 (1082)
...++|++.+.||+|+||.||+|+.. ++.||||++... ....+.+|.+++... +||||+++++++... ..
T Consensus 34 ~~~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~---~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~ 109 (337)
T 3mdy_A 34 TIAKQIQMVKQIGKGRYGEVWMGKWR-GEKVAVKVFFTT---EEASWFRETEIYQTVLMRHENILGFIAADIKGTGSWTQ 109 (337)
T ss_dssp THHHHCEEEEEEEEETTEEEEEEEET-TEEEEEEEEEGG---GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEESCGGGCE
T ss_pred ccccceEEEeEeecCCCeEEEEEEEC-CceEEEEEEecc---ccchhhhHHHHHHHHhhcCCCeeeEEEEEccCCCCCCc
Confidence 34568999999999999999999876 999999998643 234455566665554 899999999998876 68
Q ss_pred EEEEEeecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCC-----CCCeEeccCCCCCEEEcCCCcEEEeec
Q 045553 872 MFLIYNYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDEC-----VPRVLHRDIKPSNILLDNNLNAYLSDF 946 (1082)
Q Consensus 872 ~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~-----~~~ivH~Dlk~~Nill~~~~~~kl~Df 946 (1082)
.++||||+++|+|.++++.. .+++..++.++.|++.||+|||+.+ .++|+||||||+||+++.++.+||+||
T Consensus 110 ~~lv~e~~~~g~L~~~l~~~---~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kl~Df 186 (337)
T 3mdy_A 110 LYLITDYHENGSLYDYLKST---TLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADL 186 (337)
T ss_dssp EEEEECCCTTCBHHHHHHHC---CBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCC
T ss_pred eEEEEeccCCCcHHHHhhcc---CCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecccchHHEEECCCCCEEEEeC
Confidence 99999999999999999864 5899999999999999999999762 348999999999999999999999999
Q ss_pred ccceecCCCCCcc---ccCcccCCCcccchhcccCCCCch------hhHHHHHHHHHHHHhC----------CCCCCCCc
Q 045553 947 GLARLLGTSETHA---TTDVAGTFGYVAPEYAMTCRVSDK------ADVYSFGVVLLELISD----------KKALDPSF 1007 (1082)
Q Consensus 947 Gla~~~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~------~Dv~slGvll~elltg----------~~p~~~~~ 1007 (1082)
|+++.+....... .....||+.|+|||++.+...+.+ +|||||||++|||++| +.||....
T Consensus 187 g~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~~~~~~~~~~~p~~~~~ 266 (337)
T 3mdy_A 187 GLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLPYHDLV 266 (337)
T ss_dssp TTCEECC---------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTS
T ss_pred CCceeeccccccccCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHHHHHHHhccCcccccccccccHhhhc
Confidence 9998765433221 234579999999999987766554 9999999999999999 55554322
Q ss_pred cCCCCCccHHHHHHHHHhcCCCccccccccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhhCCC
Q 045553 1008 CSFGNGFNIVAWASMLLLQGRPCEFFTAGLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQLKQIQPP 1080 (1082)
Q Consensus 1008 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L~~i~~~ 1080 (1082)
.. ......+ ............+.... .+...+.++.+++.+||+.||++||++.||+++|+++.+.
T Consensus 267 ~~---~~~~~~~-~~~~~~~~~~~~~~~~~---~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~~ 332 (337)
T 3mdy_A 267 PS---DPSYEDM-REIVCIKKLRPSFPNRW---SSDECLRQMGKLMTECWAHNPASRLTALRVKKTLAKMSES 332 (337)
T ss_dssp CS---SCCHHHH-HHHHTTSCCCCCCCGGG---GGSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred CC---CCchhhh-HHHHhhhccCccccccc---hhhHHHHHHHHHHHHhhhhChhhCCCHHHHHHHHHHHHhh
Confidence 21 1222222 22222211111111100 1236778899999999999999999999999999988654
No 137
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}
Probab=100.00 E-value=5.8e-37 Score=347.18 Aligned_cols=252 Identities=22% Similarity=0.349 Sum_probs=201.3
Q ss_pred HhcCccccceecccCceEEEEEEEc-CCeEEEEEEeecCcc-ccHHHHHHHHHHHhccCCCceeeEeeeeccCC------
Q 045553 799 ATAGFNVQNCIGSGGFGATYKAEII-PGVVVAVKRLSVGRF-QGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEA------ 870 (1082)
Q Consensus 799 ~~~~~~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~------ 870 (1082)
..++|++.+.||+|+||.||+|+.. +|+.||||++..... ...+.+.+|++++++++||||+++++++.+..
T Consensus 4 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~ 83 (332)
T 3qd2_B 4 YLTDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQE 83 (332)
T ss_dssp HHHHEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCSTTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHHH
T ss_pred hhhcCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCCchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhhh
Confidence 3467999999999999999999775 789999999975443 35678999999999999999999999875433
Q ss_pred ---------------------------------------------------eEEEEEeecCCCCHHHHHhhCC-CCCCCH
Q 045553 871 ---------------------------------------------------EMFLIYNYLPGGNLEKFIQDRP-RRTVEW 898 (1082)
Q Consensus 871 ---------------------------------------------------~~~lV~E~~~~gsL~~~l~~~~-~~~l~~ 898 (1082)
..++||||+++++|.+++.... ....++
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~ 163 (332)
T 3qd2_B 84 EMDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREH 163 (332)
T ss_dssp HHHC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCSGGGSCH
T ss_pred hhhhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccCccchhh
Confidence 3799999999999999998753 234567
Q ss_pred HHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCCCCC-----------ccccCcccCC
Q 045553 899 SMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGTSET-----------HATTDVAGTF 967 (1082)
Q Consensus 899 ~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~-----------~~~~~~~gt~ 967 (1082)
..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++....... .......||+
T Consensus 164 ~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~gt~ 240 (332)
T 3qd2_B 164 GVCLHIFIQIAEAVEFLHSK---GLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTK 240 (332)
T ss_dssp HHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCCSCC-CG
T ss_pred HHHHHHHHHHHHHHHHHHhC---CeeecCCCcccEEEeCCCCEEEeecCcccccccchhhccccccccccccccccCCCc
Confidence 78999999999999999999 999999999999999999999999999998764422 1233457999
Q ss_pred CcccchhcccCCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCCCccccccccCCCCChHHHH
Q 045553 968 GYVAPEYAMTCRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQGRPCEFFTAGLWDCGPHDDLI 1047 (1082)
Q Consensus 968 ~y~aPE~~~~~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~ 1047 (1082)
.|+|||++.+..++.++||||+|+++|||++|..|+.. .... ........... .......
T Consensus 241 ~y~aPE~~~~~~~~~~~Di~slG~il~el~~~~~~~~~----------~~~~-~~~~~~~~~~~---------~~~~~~~ 300 (332)
T 3qd2_B 241 LYMSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQME----------RVRI-ITDVRNLKFPL---------LFTQKYP 300 (332)
T ss_dssp GGSCHHHHHCCCCCTHHHHHHHHHHHHHHHSCCCCHHH----------HHHH-HHHHHTTCCCH---------HHHHHCH
T ss_pred CccChHHhcCCCCcchhhHHHHHHHHHHHHHcCCChhH----------HHHH-HHHhhccCCCc---------ccccCCh
Confidence 99999999999999999999999999999998766421 1111 11112221111 1123345
Q ss_pred HHHHHHHHcccCCCCCCCCHHHHHHH
Q 045553 1048 EMLNLAIMCTGESLSSRPSMRQVAQQ 1073 (1082)
Q Consensus 1048 ~l~~li~~cl~~~p~~RPt~~ev~~~ 1073 (1082)
.+.+++.+|++.||++||++.|++++
T Consensus 301 ~~~~li~~~l~~~p~~Rps~~~~l~~ 326 (332)
T 3qd2_B 301 QEHMMVQDMLSPSPTERPEATDIIEN 326 (332)
T ss_dssp HHHHHHHHHHCSSGGGSCCHHHHHHS
T ss_pred hHHHHHHHHccCCCCcCCCHHHHhhc
Confidence 67899999999999999999999874
No 138
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*
Probab=100.00 E-value=5.3e-37 Score=355.49 Aligned_cols=268 Identities=17% Similarity=0.232 Sum_probs=207.4
Q ss_pred HhcCccccceeccc--CceEEEEEEEc-CCeEEEEEEeecCc--cccHHHHHHHHHHHhccCCCceeeEeeeeccCCeEE
Q 045553 799 ATAGFNVQNCIGSG--GFGATYKAEII-PGVVVAVKRLSVGR--FQGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMF 873 (1082)
Q Consensus 799 ~~~~~~~~~~lg~G--~~g~Vy~a~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 873 (1082)
..++|++.++||+| +||.||+|+.. +|+.||||++.... ....+.+.+|++++++++||||+++++++.+.+..+
T Consensus 23 ~~~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 102 (389)
T 3gni_B 23 EGGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELW 102 (389)
T ss_dssp CGGGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEE
T ss_pred CCCcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECCEEE
Confidence 35679999999999 99999999765 68999999997553 234567888999999999999999999999999999
Q ss_pred EEEeecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecC
Q 045553 874 LIYNYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLG 953 (1082)
Q Consensus 874 lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~ 953 (1082)
+||||+++|+|.+++.......+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||.+....
T Consensus 103 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~NIll~~~~~~kl~dfg~~~~~~ 179 (389)
T 3gni_B 103 VVTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIHHM---GYVHRSVKASHILISVDGKVYLSGLRSNLSMI 179 (389)
T ss_dssp EEEECCTTCBHHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCGGGCEECE
T ss_pred EEEEccCCCCHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEcccccceeec
Confidence 999999999999999887667799999999999999999999999 99999999999999999999999999987543
Q ss_pred CCCC------ccccCcccCCCcccchhccc--CCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHh
Q 045553 954 TSET------HATTDVAGTFGYVAPEYAMT--CRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLL 1025 (1082)
Q Consensus 954 ~~~~------~~~~~~~gt~~y~aPE~~~~--~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 1025 (1082)
.... .......||..|+|||++.+ ..++.++||||+||++|||++|+.||...... ............
T Consensus 180 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~----~~~~~~~~~~~~ 255 (389)
T 3gni_B 180 SHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPAT----QMLLEKLNGTVP 255 (389)
T ss_dssp ETTEECSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTCCST----THHHHC------
T ss_pred cccccccccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHH----HHHHHHhcCCCC
Confidence 2111 11223478999999999987 67899999999999999999999999753211 111111000000
Q ss_pred ----------------------cCCCcccccc---------ccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 045553 1026 ----------------------QGRPCEFFTA---------GLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQ 1073 (1082)
Q Consensus 1026 ----------------------~~~~~~~~d~---------~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~ 1073 (1082)
.....+.+.. ......+...+..+.+++.+|++.||++|||+.|++++
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~ell~h 334 (389)
T 3gni_B 256 CLLDTSTIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARPSASTLLNH 334 (389)
T ss_dssp --------------------------------------------------CCHHHHHHHHHHTCSCTTTSCCHHHHTTS
T ss_pred ccccccccccccccccccccccccccccccccCccccccCCCCCCccccccCHHHHHHHHHHhhcCcccCCCHHHHhcC
Confidence 0000000000 00001123345679999999999999999999999865
No 139
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}
Probab=100.00 E-value=6e-37 Score=342.74 Aligned_cols=254 Identities=27% Similarity=0.405 Sum_probs=200.9
Q ss_pred cCccccceecccCceEEEEEEEcCCeEEEEEEeecCccccHHHHHHHHHHHhccCCCceeeEeeeeccCCeEEEEEeecC
Q 045553 801 AGFNVQNCIGSGGFGATYKAEIIPGVVVAVKRLSVGRFQGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFLIYNYLP 880 (1082)
Q Consensus 801 ~~~~~~~~lg~G~~g~Vy~a~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~~~ 880 (1082)
.+|++.+.||+|+||.||+|+.. ++.||||++... ...+.+.+|++++++++||||+++++++.+ ..++||||++
T Consensus 8 ~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~--~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~--~~~lv~e~~~ 82 (307)
T 2eva_A 8 KEIEVEEVVGRGAFGVVCKAKWR-AKDVAIKQIESE--SERKAFIVELRQLSRVNHPNIVKLYGACLN--PVCLVMEYAE 82 (307)
T ss_dssp GGEEEEEEEECCSSSEEEEEEET-TEEEEEEECSST--THHHHHHHHHHHHHHCCCTTBCCEEEBCTT--TTEEEEECCT
T ss_pred hHeeeeeEeecCCCceEEEEEEC-CeeEEEEEecCh--hHHHHHHHHHHHHhcCCCCCcCeEEEEEcC--CcEEEEEcCC
Confidence 46889999999999999999875 889999998643 345789999999999999999999998874 4799999999
Q ss_pred CCCHHHHHhhCCC-CCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCc-EEEeecccceecCCCCCc
Q 045553 881 GGNLEKFIQDRPR-RTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLN-AYLSDFGLARLLGTSETH 958 (1082)
Q Consensus 881 ~gsL~~~l~~~~~-~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~-~kl~DfGla~~~~~~~~~ 958 (1082)
+++|.++++.... ..+++..++.++.|+++||+|||+....+|+||||||+||+++.++. +||+|||++......
T Consensus 83 ~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~~~~~--- 159 (307)
T 2eva_A 83 GGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTH--- 159 (307)
T ss_dssp TCBHHHHHHCSSSEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEECCCCC----------
T ss_pred CCCHHHHHhccCCCCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEEEcccccccccccc---
Confidence 9999999986532 24789999999999999999999932229999999999999998886 799999999765432
Q ss_pred cccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCCCccccccccC
Q 045553 959 ATTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQGRPCEFFTAGLW 1038 (1082)
Q Consensus 959 ~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 1038 (1082)
.....||+.|+|||++.+..++.++||||||+++|||++|+.||+... .......... ..+...
T Consensus 160 -~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~------~~~~~~~~~~-~~~~~~-------- 223 (307)
T 2eva_A 160 -MTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIG------GPAFRIMWAV-HNGTRP-------- 223 (307)
T ss_dssp ------CCTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTTTC------SSHHHHHHHH-HTTCCC--------
T ss_pred -cccCCCCCceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchhhC------ccHHHHHHHH-hcCCCC--------
Confidence 223468999999999999999999999999999999999999997431 1112222222 222111
Q ss_pred CCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhhCC
Q 045553 1039 DCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQLKQIQP 1079 (1082)
Q Consensus 1039 ~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L~~i~~ 1079 (1082)
..+...+..+.+++.+|++.+|++||++.|+++.|+.+..
T Consensus 224 -~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~ 263 (307)
T 2eva_A 224 -PLIKNLPKPIESLMTRCWSKDPSQRPSMEEIVKIMTHLMR 263 (307)
T ss_dssp -CCBTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHGG
T ss_pred -CcccccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHH
Confidence 1122345678999999999999999999999999988753
No 140
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*
Probab=100.00 E-value=1.6e-36 Score=345.25 Aligned_cols=267 Identities=24% Similarity=0.330 Sum_probs=212.8
Q ss_pred HHHhcCccccceecccCceEEEEEEEcCCeEEEEEEeecCccccHHHHHHHHHHHhc--cCCCceeeEeeeeccCC----
Q 045553 797 VRATAGFNVQNCIGSGGFGATYKAEIIPGVVVAVKRLSVGRFQGVQQFAAEIRTLGR--VQHPNLVTLIGYHVSEA---- 870 (1082)
Q Consensus 797 ~~~~~~~~~~~~lg~G~~g~Vy~a~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~--l~h~niv~l~~~~~~~~---- 870 (1082)
....++|++.+.||+|+||.||+|+. +++.||||++... ..+.+.+|.++++. ++||||+++++++....
T Consensus 38 ~~~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~---~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~~~~~~ 113 (342)
T 1b6c_B 38 RTIARTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSR---EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWT 113 (342)
T ss_dssp HHHHHHCEEEEEEEEETTEEEEEEEE-TTEEEEEEEECGG---GHHHHHHHHHHHHHSCCCCTTBCCEEEEEECCCSSCC
T ss_pred ccccccEEEEeeecCCCCcEEEEEEE-cCccEEEEEeCch---hHHHHHHHHHHHHHhhcCCCcEEEEEeeecccCCccc
Confidence 34557899999999999999999987 4999999998643 34667888888887 79999999999998765
Q ss_pred eEEEEEeecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHh--------hCCCCCeEeccCCCCCEEEcCCCcEE
Q 045553 871 EMFLIYNYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLH--------DECVPRVLHRDIKPSNILLDNNLNAY 942 (1082)
Q Consensus 871 ~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH--------~~~~~~ivH~Dlk~~Nill~~~~~~k 942 (1082)
..++||||+++|+|.+++... .+++..++.++.|++.||+||| +. +|+||||||+||+++.++.+|
T Consensus 114 ~~~lv~e~~~~g~L~~~l~~~---~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~---~ivH~Dlkp~NIll~~~~~~k 187 (342)
T 1b6c_B 114 QLWLVSDYHEHGSLFDYLNRY---TVTVEGMIKLALSTASGLAHLHMEIVGTQGKP---AIAHRDLKSKNILVKKNGTCC 187 (342)
T ss_dssp CEEEEECCCTTCBHHHHHHHC---CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBC---EEECSCCSGGGEEECTTSCEE
T ss_pred eeEEEEeecCCCcHHHHHhcc---CccHHHHHHHHHHHHHHHHHHHHHHhhhcccC---CeeeCCCCHHHEEECCCCCEE
Confidence 789999999999999999864 5899999999999999999999 77 999999999999999999999
Q ss_pred EeecccceecCCCCCc---cccCcccCCCcccchhcccC------CCCchhhHHHHHHHHHHHHhC----------CCCC
Q 045553 943 LSDFGLARLLGTSETH---ATTDVAGTFGYVAPEYAMTC------RVSDKADVYSFGVVLLELISD----------KKAL 1003 (1082)
Q Consensus 943 l~DfGla~~~~~~~~~---~~~~~~gt~~y~aPE~~~~~------~~~~~~Dv~slGvll~elltg----------~~p~ 1003 (1082)
|+|||++......... ......||+.|+|||++.+. .++.++||||||+++|||++| ..||
T Consensus 188 L~Dfg~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~p~ 267 (342)
T 1b6c_B 188 IADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPY 267 (342)
T ss_dssp ECCCTTCEEEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTT
T ss_pred EEECCCceeccccccccccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhccCcCCcccccccCc
Confidence 9999999877544322 23445799999999999875 234789999999999999999 6677
Q ss_pred CCCccCCCCCccHHHHHHHHHhcCCCccccccccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhhCCC
Q 045553 1004 DPSFCSFGNGFNIVAWASMLLLQGRPCEFFTAGLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQLKQIQPP 1080 (1082)
Q Consensus 1004 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L~~i~~~ 1080 (1082)
...... ......+............. .... ...+....+.+++.+||+.+|++||++.||+++|+++...
T Consensus 268 ~~~~~~---~~~~~~~~~~~~~~~~~~~~-~~~~---~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~i~~~ 337 (342)
T 1b6c_B 268 YDLVPS---DPSVEEMRKVVCEQKLRPNI-PNRW---QSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQ 337 (342)
T ss_dssp TTTSCS---SCCHHHHHHHHTTSCCCCCC-CGGG---GTSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred cccCcC---cccHHHHHHHHHHHHhCCCC-cccc---cchhHHHHHHHHHHHHhccChhhCCCHHHHHHHHHHHHHH
Confidence 543221 22333333333222211111 1110 1236678899999999999999999999999999988654
No 141
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*
Probab=100.00 E-value=4.1e-37 Score=345.78 Aligned_cols=264 Identities=22% Similarity=0.351 Sum_probs=192.3
Q ss_pred hcCccccceecccCceEEEEEEEc-CCeEEEEEEeecCcc-ccHHHHHHHHHHHhccCCCceeeEeeeeccCCeEEEEEe
Q 045553 800 TAGFNVQNCIGSGGFGATYKAEII-PGVVVAVKRLSVGRF-QGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFLIYN 877 (1082)
Q Consensus 800 ~~~~~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~E 877 (1082)
..+|++.+.||+|+||.||+|... +|+.||+|++..... ...+.+.+|++++++++||||+++++++.+++..++|||
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 83 (317)
T 2pmi_A 4 SSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLVFE 83 (317)
T ss_dssp ---------------CEEEEEECSSSCCEEEEEEEECCSTTCSCHHHHHHHHHHTTCCBTTBCCEEEEECCTTEEEEEEE
T ss_pred ccceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeecccccccHHHHHHHHHHHHhcCCCCcceEEEEEEECCeEEEEEE
Confidence 467999999999999999999654 589999999975432 334678899999999999999999999999999999999
Q ss_pred ecCCCCHHHHHhhCC----CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecC
Q 045553 878 YLPGGNLEKFIQDRP----RRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLG 953 (1082)
Q Consensus 878 ~~~~gsL~~~l~~~~----~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~ 953 (1082)
|++ ++|.+++.... ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++...
T Consensus 84 ~~~-~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~ 159 (317)
T 2pmi_A 84 FMD-NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHEN---KILHRDLKPQNLLINKRGQLKLGDFGLARAFG 159 (317)
T ss_dssp CCC-CBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCSSCEETT
T ss_pred ecC-CCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCChHHeEEcCCCCEEECcCccceecC
Confidence 997 69999987532 24689999999999999999999999 99999999999999999999999999998765
Q ss_pred CCCCccccCcccCCCcccchhccc-CCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCCCc--
Q 045553 954 TSETHATTDVAGTFGYVAPEYAMT-CRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQGRPC-- 1030 (1082)
Q Consensus 954 ~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 1030 (1082)
.... ......||+.|+|||++.+ ..++.++||||+||++|||++|+.||.... .......+..........
T Consensus 160 ~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~-----~~~~~~~i~~~~~~~~~~~~ 233 (317)
T 2pmi_A 160 IPVN-TFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTN-----DEEQLKLIFDIMGTPNESLW 233 (317)
T ss_dssp SCCC-CCCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSS-----HHHHHHHHHHHHCSCCTTTC
T ss_pred CCcc-cCCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC-----hHHHHHHHHHHhCCCChhHh
Confidence 3322 2234578999999999976 468999999999999999999999997431 111111111111110000
Q ss_pred -cc-----cccccC------------CCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 045553 1031 -EF-----FTAGLW------------DCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQ 1073 (1082)
Q Consensus 1031 -~~-----~d~~l~------------~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~ 1073 (1082)
.. ..+.+. ...+...+.++.+++.+|++.||++|||+.|++++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~h 294 (317)
T 2pmi_A 234 PSVTKLPKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALHH 294 (317)
T ss_dssp GGGGGCTTCCTTCCCCCCCCSHHHHGGGCSSCCCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred hhhhhhhhcccccccccchhHHHhhcccccccCCHHHHHHHHHHCCCCcccCCCHHHHhCC
Confidence 00 000000 00111234679999999999999999999999864
No 142
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Probab=100.00 E-value=1.5e-37 Score=348.48 Aligned_cols=257 Identities=22% Similarity=0.313 Sum_probs=199.7
Q ss_pred hcCccccceecccCceEEEEEEE-cCCeEEEEEEeecCcc---ccHHHHHHHHHHHhccCCCceeeEeeeeccCC----e
Q 045553 800 TAGFNVQNCIGSGGFGATYKAEI-IPGVVVAVKRLSVGRF---QGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEA----E 871 (1082)
Q Consensus 800 ~~~~~~~~~lg~G~~g~Vy~a~~-~~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~----~ 871 (1082)
.++|++.+.||+|+||.||+|+. .+++.||||++..... .....+.+|++++++++||||+++++++.... .
T Consensus 11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~ 90 (311)
T 3ork_A 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPL 90 (311)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETTEEE
T ss_pred cCcEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCCCcc
Confidence 46799999999999999999975 5689999999976532 33457889999999999999999999987654 3
Q ss_pred EEEEEeecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeeccccee
Q 045553 872 MFLIYNYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARL 951 (1082)
Q Consensus 872 ~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~ 951 (1082)
.++||||+++++|.++++.. ..+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.
T Consensus 91 ~~lv~e~~~g~~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~a~~ 165 (311)
T 3ork_A 91 PYIVMEYVDGVTLRDIVHTE--GPMTPKRAIEVIADACQALNFSHQN---GIIHRDVKPANIMISATNAVKVMDFGIARA 165 (311)
T ss_dssp EEEEEECCCEEEHHHHHHHH--CSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEETTSCEEECCCSCC--
T ss_pred cEEEEecCCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CCCcCCCCHHHEEEcCCCCEEEeeccCccc
Confidence 49999999999999999874 4689999999999999999999999 999999999999999999999999999987
Q ss_pred cCCCCC--ccccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCCC
Q 045553 952 LGTSET--HATTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQGRP 1029 (1082)
Q Consensus 952 ~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1029 (1082)
+..... .......||+.|+|||++.+..++.++||||||+++|||++|+.||... ...............
T Consensus 166 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~--------~~~~~~~~~~~~~~~ 237 (311)
T 3ork_A 166 IADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGD--------SPVSVAYQHVREDPI 237 (311)
T ss_dssp ----------------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCCS--------SHHHHHHHHHHCCCC
T ss_pred ccccccccccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCC--------ChHHHHHHHhcCCCC
Confidence 654322 2233457999999999999999999999999999999999999999632 223333333333322
Q ss_pred ccccccccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHH-HHHHhh
Q 045553 1030 CEFFTAGLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQV-AQQLKQ 1076 (1082)
Q Consensus 1030 ~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev-~~~L~~ 1076 (1082)
.... .....+.++.+++.+|++.||++||+..++ ...+.+
T Consensus 238 ~~~~-------~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~ 278 (311)
T 3ork_A 238 PPSA-------RHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVR 278 (311)
T ss_dssp CHHH-------HSTTCCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHH
T ss_pred Cccc-------ccCCCCHHHHHHHHHHHhcCHhhChhhHHHHHHHHHH
Confidence 1110 011235679999999999999999966554 445544
No 143
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}
Probab=100.00 E-value=4.3e-37 Score=347.25 Aligned_cols=267 Identities=28% Similarity=0.414 Sum_probs=214.4
Q ss_pred hcCccccceecccCceEEEEEEE-----cCCeEEEEEEeecCccccHHHHHHHHHHHhccCCCceeeEeeeeccCC--eE
Q 045553 800 TAGFNVQNCIGSGGFGATYKAEI-----IPGVVVAVKRLSVGRFQGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEA--EM 872 (1082)
Q Consensus 800 ~~~~~~~~~lg~G~~g~Vy~a~~-----~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~--~~ 872 (1082)
..+|++.+.||+|+||.||+|+. .+++.||||++........+.+.+|++++++++||||+++++++...+ ..
T Consensus 40 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 119 (326)
T 2w1i_A 40 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNL 119 (326)
T ss_dssp GGGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCCSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC----CC
T ss_pred HHHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecCCCce
Confidence 34689999999999999999974 368999999998766666788999999999999999999999887654 78
Q ss_pred EEEEeecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceec
Q 045553 873 FLIYNYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLL 952 (1082)
Q Consensus 873 ~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~ 952 (1082)
++||||+++++|.+++... ...+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++..
T Consensus 120 ~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dikp~NIli~~~~~~kL~Dfg~~~~~ 195 (326)
T 2w1i_A 120 KLIMEYLPYGSLRDYLQKH-KERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVL 195 (326)
T ss_dssp EEEECCCTTCBHHHHHHHS-TTSSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEEEETTEEEECCCTTCEEC
T ss_pred EEEEECCCCCCHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHhC---CEeccCCCcceEEEcCCCcEEEecCcchhhc
Confidence 9999999999999999875 34689999999999999999999999 9999999999999999999999999999887
Q ss_pred CCCCCc--cccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHhCCCCCCCCccC-------CCCCccHHHHHHHH
Q 045553 953 GTSETH--ATTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELISDKKALDPSFCS-------FGNGFNIVAWASML 1023 (1082)
Q Consensus 953 ~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~elltg~~p~~~~~~~-------~~~~~~~~~~~~~~ 1023 (1082)
...... ......++..|+|||.+.+..++.++||||||+++|||++|+.|+...... ..........+...
T Consensus 196 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (326)
T 2w1i_A 196 PQDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIEL 275 (326)
T ss_dssp CSSCSEEECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTCGGGSHHHHHHHHHCTTCCTHHHHHHHHHH
T ss_pred cccccccccccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcCCCCCCCHHHHHHhhccccchhhhHHHHHHH
Confidence 544332 123345778899999999988999999999999999999999987632100 00001111111122
Q ss_pred HhcCCCccccccccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhhCC
Q 045553 1024 LLQGRPCEFFTAGLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQLKQIQP 1079 (1082)
Q Consensus 1024 ~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L~~i~~ 1079 (1082)
+..+. ....+...+.++.+++.+||+.+|++||++.||++.|++++.
T Consensus 276 ~~~~~---------~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~el~~~L~~l~~ 322 (326)
T 2w1i_A 276 LKNNG---------RLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRD 322 (326)
T ss_dssp HHTTC---------CCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHH
T ss_pred hhcCC---------CCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence 22111 112234456789999999999999999999999999998753
No 144
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Probab=100.00 E-value=1.7e-37 Score=353.08 Aligned_cols=251 Identities=19% Similarity=0.324 Sum_probs=200.5
Q ss_pred hcCccccceecccCceEEEEEEEcCCeEEEEEEeecCcc--ccHHHHHHHHHHHhccCC--CceeeEeeeeccCCeEEEE
Q 045553 800 TAGFNVQNCIGSGGFGATYKAEIIPGVVVAVKRLSVGRF--QGVQQFAAEIRTLGRVQH--PNLVTLIGYHVSEAEMFLI 875 (1082)
Q Consensus 800 ~~~~~~~~~lg~G~~g~Vy~a~~~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h--~niv~l~~~~~~~~~~~lV 875 (1082)
..+|++.+.||+|+||.||+|...+++.||||++..... ...+.+.+|++++++++| |||+++++++.+....++|
T Consensus 8 ~~~y~i~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv 87 (343)
T 3dbq_A 8 GRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMV 87 (343)
T ss_dssp SCEEEEEEEESCCSSEEEEEEECTTSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred cCEEEEEEEEecCCCeEEEEEEeCCCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCCEEEEE
Confidence 456999999999999999999888899999999975532 345778999999999987 9999999999999999999
Q ss_pred EeecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCCC
Q 045553 876 YNYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGTS 955 (1082)
Q Consensus 876 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~ 955 (1082)
||+ .+++|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+||+++ ++.+||+|||+++.+...
T Consensus 88 ~e~-~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~al~~lH~~---~iiHrDikp~NIll~-~~~~kl~DFG~a~~~~~~ 160 (343)
T 3dbq_A 88 MEC-GNIDLNSWLKKK--KSIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPD 160 (343)
T ss_dssp ECC-CSEEHHHHHHHS--CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEE-TTEEEECCCSSSCCC---
T ss_pred EeC-CCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCcceEEEE-CCcEEEeecccccccCcc
Confidence 995 588999999874 4689999999999999999999999 999999999999997 578999999999876543
Q ss_pred CCc-cccCcccCCCcccchhccc-----------CCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHH
Q 045553 956 ETH-ATTDVAGTFGYVAPEYAMT-----------CRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASML 1023 (1082)
Q Consensus 956 ~~~-~~~~~~gt~~y~aPE~~~~-----------~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 1023 (1082)
... ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||.... .........
T Consensus 161 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~-------~~~~~~~~~ 233 (343)
T 3dbq_A 161 TTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQII-------NQISKLHAI 233 (343)
T ss_dssp ---------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTCC-------SHHHHHHHH
T ss_pred cccccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhh-------hHHHHHHHH
Confidence 332 2345679999999999865 678999999999999999999999996321 112222222
Q ss_pred HhcCCCccccccccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 045553 1024 LLQGRPCEFFTAGLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQ 1073 (1082)
Q Consensus 1024 ~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~ 1073 (1082)
... ......+.....++.+++.+|++.||++|||+.|++++
T Consensus 234 ~~~---------~~~~~~~~~~~~~l~~li~~~L~~dp~~Rpt~~e~l~h 274 (343)
T 3dbq_A 234 IDP---------NHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAH 274 (343)
T ss_dssp HCT---------TSCCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred hcC---------CcccCCcccCCHHHHHHHHHHcCCChhHCCCHHHHHhC
Confidence 221 11112233344678999999999999999999999865
No 145
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}
Probab=100.00 E-value=6.9e-37 Score=348.34 Aligned_cols=252 Identities=23% Similarity=0.305 Sum_probs=192.4
Q ss_pred HhcCccccceecccCceEEEEEEEc-CCeEEEEEEeecCccccHHHHHHHHHHHhccCCCceeeEeeeeccCCeEEEEEe
Q 045553 799 ATAGFNVQNCIGSGGFGATYKAEII-PGVVVAVKRLSVGRFQGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFLIYN 877 (1082)
Q Consensus 799 ~~~~~~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~E 877 (1082)
..++|++.+.||+|+||.||+|+.. +++.||||++.... ..+.+.+|++++++++||||+++++++.+....++|||
T Consensus 51 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 128 (349)
T 2w4o_A 51 LSDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTV--DKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLVLE 128 (349)
T ss_dssp GGGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC------------CHHHHHCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred ccCcEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccch--hHHHHHHHHHHHHhCCCCCCcceeeeEecCCeEEEEEE
Confidence 4567999999999999999999776 57899999997543 34668899999999999999999999999999999999
Q ss_pred ecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcC---CCcEEEeecccceecCC
Q 045553 878 YLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDN---NLNAYLSDFGLARLLGT 954 (1082)
Q Consensus 878 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~---~~~~kl~DfGla~~~~~ 954 (1082)
|+++++|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+||+++. ++.+||+|||+++....
T Consensus 129 ~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~~~~ 203 (349)
T 2w4o_A 129 LVTGGELFDRIVEK--GYYSERDAADAVKQILEAVAYLHEN---GIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEH 203 (349)
T ss_dssp CCCSCBHHHHHTTC--SSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEESSSSTTCCEEECCCC-------
T ss_pred eCCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCcccEEEecCCCCCCEEEccCccccccCc
Confidence 99999999999863 4689999999999999999999999 9999999999999975 88999999999987643
Q ss_pred CCCccccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCCCccccc
Q 045553 955 SETHATTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQGRPCEFFT 1034 (1082)
Q Consensus 955 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 1034 (1082)
.. ......||+.|+|||++.+..++.++|||||||++|||++|+.||.... ......... ...... ..
T Consensus 204 ~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~-------~~~~~~~~i-~~~~~~-~~- 271 (349)
T 2w4o_A 204 QV--LMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDER-------GDQFMFRRI-LNCEYY-FI- 271 (349)
T ss_dssp -----------CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCTT-------CHHHHHHHH-HTTCCC-CC-
T ss_pred cc--ccccccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCc-------ccHHHHHHH-HhCCCc-cC-
Confidence 22 2334579999999999999999999999999999999999999996321 111122222 222111 00
Q ss_pred cccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 045553 1035 AGLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQ 1073 (1082)
Q Consensus 1035 ~~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~ 1073 (1082)
.......+.++.+++.+|++.||++||++.|++++
T Consensus 272 ----~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 306 (349)
T 2w4o_A 272 ----SPWWDEVSLNAKDLVRKLIVLDPKKRLTTFQALQH 306 (349)
T ss_dssp ----TTTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred ----CchhhhCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 01112345689999999999999999999999874
No 146
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}
Probab=100.00 E-value=3.5e-37 Score=345.34 Aligned_cols=245 Identities=25% Similarity=0.302 Sum_probs=195.9
Q ss_pred cCccccceecccCceEEEEEEEc-CCeEEEEEEeecCcc--ccHHHHHHHHHHHhcc-CCCceeeEeeeeccCCeEEEEE
Q 045553 801 AGFNVQNCIGSGGFGATYKAEII-PGVVVAVKRLSVGRF--QGVQQFAAEIRTLGRV-QHPNLVTLIGYHVSEAEMFLIY 876 (1082)
Q Consensus 801 ~~~~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lV~ 876 (1082)
++|++.++||+|+||+||+|... +|+.||||++..... .....+..|+..+.+. +||||+++++++.+.+..++||
T Consensus 57 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~~~~lv~ 136 (311)
T 3p1a_A 57 QSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYLQT 136 (311)
T ss_dssp HHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hheeeeheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCCEEEEEE
Confidence 57999999999999999999776 689999999865432 2333455555555555 8999999999999999999999
Q ss_pred eecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCCCC
Q 045553 877 NYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGTSE 956 (1082)
Q Consensus 877 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~ 956 (1082)
||+ +++|.+++... ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++.......
T Consensus 137 e~~-~~~L~~~~~~~-~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kl~DFG~a~~~~~~~ 211 (311)
T 3p1a_A 137 ELC-GPSLQQHCEAW-GASLPEAQVWGYLRDTLLALAHLHSQ---GLVHLDVKPANIFLGPRGRCKLGDFGLLVELGTAG 211 (311)
T ss_dssp ECC-CCBHHHHHHHH-CSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECGGGCEEECCCTTCEECC---
T ss_pred ecc-CCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEECCCCCEEEccceeeeecccCC
Confidence 999 77999998875 45699999999999999999999999 99999999999999999999999999998765432
Q ss_pred CccccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCCCccccccc
Q 045553 957 THATTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQGRPCEFFTAG 1036 (1082)
Q Consensus 957 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 1036 (1082)
......||+.|+|||++.+ .++.++|||||||++|||++|..|+... ..| ..+..+.....
T Consensus 212 --~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~~~~~~----------~~~--~~~~~~~~~~~---- 272 (311)
T 3p1a_A 212 --AGEVQEGDPRYMAPELLQG-SYGTAADVFSLGLTILEVACNMELPHGG----------EGW--QQLRQGYLPPE---- 272 (311)
T ss_dssp -----CCCCCGGGCCGGGGGT-CCSTHHHHHHHHHHHHHHHHTCCCCSSH----------HHH--HHHTTTCCCHH----
T ss_pred --CCcccCCCccccCHhHhcC-CCCchhhHHHHHHHHHHHHhCCCCCCCc----------cHH--HHHhccCCCcc----
Confidence 2334569999999999876 7899999999999999999998776421 111 11222211111
Q ss_pred cCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 045553 1037 LWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQ 1073 (1082)
Q Consensus 1037 l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~ 1073 (1082)
.+...+.++.+++.+|++.||++|||+.|++++
T Consensus 273 ----~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~h 305 (311)
T 3p1a_A 273 ----FTAGLSSELRSVLVMMLEPDPKLRATAEALLAL 305 (311)
T ss_dssp ----HHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred ----cccCCCHHHHHHHHHHcCCChhhCcCHHHHHhC
Confidence 112335689999999999999999999999863
No 147
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A
Probab=100.00 E-value=8.8e-37 Score=348.96 Aligned_cols=253 Identities=22% Similarity=0.248 Sum_probs=198.8
Q ss_pred hcCccccceecccCceEEEEEEEc-CCeEEEEEEeecCccccHHHHHHHHHHHhccCCCceeeEeeeeccCCeEEEEEee
Q 045553 800 TAGFNVQNCIGSGGFGATYKAEII-PGVVVAVKRLSVGRFQGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFLIYNY 878 (1082)
Q Consensus 800 ~~~~~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~ 878 (1082)
.++|++.+.||+|+||+||+|+.. +++.||||++..... ..+.+.+|+.++++++||||+++++++.+....++||||
T Consensus 19 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~ 97 (361)
T 3uc3_A 19 SDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAA-IDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIIMEY 97 (361)
T ss_dssp TTTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESSTT-SCHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred CCcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCcc-ccHHHHHHHHHHHhCCCCCCCcEEEEEeeCCEEEEEEEe
Confidence 467999999999999999999765 689999999976533 236688999999999999999999999999999999999
Q ss_pred cCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCc--EEEeecccceecCCCC
Q 045553 879 LPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLN--AYLSDFGLARLLGTSE 956 (1082)
Q Consensus 879 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~--~kl~DfGla~~~~~~~ 956 (1082)
+++|+|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++. +||+|||+++......
T Consensus 98 ~~~~~L~~~l~~~--~~~~~~~~~~i~~ql~~~L~~LH~~---~ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~~~~~~ 172 (361)
T 3uc3_A 98 ASGGELYERICNA--GRFSEDEARFFFQQLLSGVSYCHSM---QICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHS 172 (361)
T ss_dssp CCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHT---TCCSCCCCGGGEEECSSSSCCEEECCCCCC-------
T ss_pred CCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEcCCCCceEEEeecCccccccccC
Confidence 9999999999763 4699999999999999999999999 9999999999999987765 9999999997543222
Q ss_pred CccccCcccCCCcccchhcccCCCCch-hhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCCCcccccc
Q 045553 957 THATTDVAGTFGYVAPEYAMTCRVSDK-ADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQGRPCEFFTA 1035 (1082)
Q Consensus 957 ~~~~~~~~gt~~y~aPE~~~~~~~~~~-~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 1035 (1082)
......||+.|+|||++.+..++.+ +||||+||++|||++|+.||..... .......+.........
T Consensus 173 --~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~----~~~~~~~~~~~~~~~~~------ 240 (361)
T 3uc3_A 173 --QPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEE----PRDYRKTIQRILSVKYS------ 240 (361)
T ss_dssp ----------CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC--------CCCHHHHHHHHHTTCCC------
T ss_pred --CCCCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCcc----HHHHHHHHHHHhcCCCC------
Confidence 2234579999999999988887665 8999999999999999999974322 22333433333322110
Q ss_pred ccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 045553 1036 GLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQ 1073 (1082)
Q Consensus 1036 ~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~ 1073 (1082)
.......+..+.+++.+|++.+|++|||+.|++++
T Consensus 241 ---~~~~~~~s~~~~~li~~~L~~dP~~Rps~~ell~h 275 (361)
T 3uc3_A 241 ---IPDDIRISPECCHLISRIFVADPATRISIPEIKTH 275 (361)
T ss_dssp ---CCTTSCCCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred ---CCCcCCCCHHHHHHHHHHccCChhHCcCHHHHHhC
Confidence 01111334678999999999999999999999875
No 148
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Probab=100.00 E-value=1.6e-37 Score=342.30 Aligned_cols=252 Identities=27% Similarity=0.425 Sum_probs=202.4
Q ss_pred hcCccccceecccCceEEEEEEEcCCeEEEEEEeecCccccHHHHHHHHHHHhccCCCceeeEeeeeccC-CeEEEEEee
Q 045553 800 TAGFNVQNCIGSGGFGATYKAEIIPGVVVAVKRLSVGRFQGVQQFAAEIRTLGRVQHPNLVTLIGYHVSE-AEMFLIYNY 878 (1082)
Q Consensus 800 ~~~~~~~~~lg~G~~g~Vy~a~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~-~~~~lV~E~ 878 (1082)
.++|++.+.||+|+||.||+|+.. |+.||||++.... ..+.+.+|++++++++||||+++++++.+. +..++||||
T Consensus 20 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~ 96 (278)
T 1byg_A 20 MKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEY 96 (278)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEET-TEEEEEEECCCCC----HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEECC
T ss_pred hhhceEEeEEecCCCceEEEEEEc-CCEEEEEEecchh--HHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCCceEEEEec
Confidence 457999999999999999999875 8999999987543 457789999999999999999999987654 578999999
Q ss_pred cCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCCCCCc
Q 045553 879 LPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGTSETH 958 (1082)
Q Consensus 879 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~ 958 (1082)
+++++|.+++.......+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||++.......
T Consensus 97 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~-- 171 (278)
T 1byg_A 97 MAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQ-- 171 (278)
T ss_dssp CTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTSCEEECCCCC----------
T ss_pred CCCCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHhC---CccccCCCcceEEEeCCCcEEEeeccccccccccc--
Confidence 9999999999875434488999999999999999999999 99999999999999999999999999998654322
Q ss_pred cccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCccCCCCCccHHHHHHHHHhcCCCcccccccc
Q 045553 959 ATTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELIS-DKKALDPSFCSFGNGFNIVAWASMLLLQGRPCEFFTAGL 1037 (1082)
Q Consensus 959 ~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 1037 (1082)
....++..|+|||++.+..++.++||||||+++|||++ |+.||.... .... ... +..+.
T Consensus 172 --~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~-----~~~~---~~~-~~~~~--------- 231 (278)
T 1byg_A 172 --DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIP-----LKDV---VPR-VEKGY--------- 231 (278)
T ss_dssp ------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSC-----GGGH---HHH-HTTTC---------
T ss_pred --cCCCccccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCCC-----HHHH---HHH-HhcCC---------
Confidence 22357889999999999999999999999999999998 999986432 1111 111 11111
Q ss_pred CCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhhCC
Q 045553 1038 WDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQLKQIQP 1079 (1082)
Q Consensus 1038 ~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L~~i~~ 1079 (1082)
....+...+..+.+++.+|++.||++||++.|+++.|++++.
T Consensus 232 ~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~i~~ 273 (278)
T 1byg_A 232 KMDAPDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLEHIKT 273 (278)
T ss_dssp CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred CCCCcccCCHHHHHHHHHHhcCChhhCCCHHHHHHHHHHHHh
Confidence 112233455789999999999999999999999999998754
No 149
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}
Probab=100.00 E-value=3.1e-37 Score=348.14 Aligned_cols=257 Identities=25% Similarity=0.436 Sum_probs=203.3
Q ss_pred hcCccccceecccCceEEEEEEEc-CCe----EEEEEEeecC-ccccHHHHHHHHHHHhccCCCceeeEeeeeccCCeEE
Q 045553 800 TAGFNVQNCIGSGGFGATYKAEII-PGV----VVAVKRLSVG-RFQGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMF 873 (1082)
Q Consensus 800 ~~~~~~~~~lg~G~~g~Vy~a~~~-~~~----~vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 873 (1082)
..+|++.+.||+|+||.||+|... +++ +||+|.+... .....+.+.+|+.++++++||||+++++++.... .+
T Consensus 14 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~-~~ 92 (327)
T 3lzb_A 14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQ 92 (327)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSSCCCHHHHHHHHHHHTTCCBTTBCCCCEEEESSS-EE
T ss_pred HhHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEecCC-ce
Confidence 457999999999999999999754 344 4677777543 3355788999999999999999999999998754 88
Q ss_pred EEEeecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecC
Q 045553 874 LIYNYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLG 953 (1082)
Q Consensus 874 lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~ 953 (1082)
+|+||+++|+|.+++... ...+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++...
T Consensus 93 ~v~~~~~~g~L~~~l~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kL~DfG~a~~~~ 168 (327)
T 3lzb_A 93 LITQLMPFGCLLDYVREH-KDNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLG 168 (327)
T ss_dssp EEECCCSSCBHHHHHHHT-TTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEETTEEEECCTTC-----
T ss_pred EEEEecCCCcHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHhhC---CCcCCCCCHHHEEEcCCCCEEEccCcceeEcc
Confidence 999999999999999876 45689999999999999999999999 99999999999999999999999999998765
Q ss_pred CCCCc-cccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCccCCCCCccHHHHHHHHHhcCCCcc
Q 045553 954 TSETH-ATTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELIS-DKKALDPSFCSFGNGFNIVAWASMLLLQGRPCE 1031 (1082)
Q Consensus 954 ~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1031 (1082)
..... ......+++.|+|||++.+..++.++||||||+++|||++ |+.||..... ..... .+..+.
T Consensus 169 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~-----~~~~~----~~~~~~--- 236 (327)
T 3lzb_A 169 AEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPA-----SEISS----ILEKGE--- 236 (327)
T ss_dssp -----------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCG-----GGHHH----HHHTTC---
T ss_pred CccccccccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCCCCH-----HHHHH----HHHcCC---
Confidence 43322 2333457889999999999999999999999999999999 9999974321 12211 122221
Q ss_pred ccccccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhhCC
Q 045553 1032 FFTAGLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQLKQIQP 1079 (1082)
Q Consensus 1032 ~~d~~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L~~i~~ 1079 (1082)
....+...+.++.+++.+||+.+|++||++.|+++.|+++..
T Consensus 237 ------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~ 278 (327)
T 3lzb_A 237 ------RLPQPPICTIDVYMIMRKCWMIDADSRPKFRELIIEFSKMAR 278 (327)
T ss_dssp ------CCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHT
T ss_pred ------CCCCCccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHh
Confidence 112233455689999999999999999999999999998753
No 150
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=100.00 E-value=1.2e-35 Score=352.65 Aligned_cols=245 Identities=25% Similarity=0.315 Sum_probs=168.2
Q ss_pred CCccccccccccCCCCCCEEEcccCCCcccCChhhcCCCCCCEEeCcCCCCCCCCCccccCCCCCCeEEccCcccccccC
Q 045553 96 DKLSGNLSRAIGDLTQLRVLLLAFNGFSGELPLEIGQLSLLEILDLSFNSFHGPIPPTLQNCSSLRLINLSGNQFNGTIP 175 (1082)
Q Consensus 96 ~~l~g~l~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p 175 (1082)
.++.+.++. ..+++|+.|+++++.+. .+| .+..+++|++|+|++|.+++. |. +.++++|++|++++|++.+..+
T Consensus 34 ~~~~~~i~~--~~l~~l~~L~l~~~~i~-~l~-~~~~l~~L~~L~Ls~n~l~~~-~~-~~~l~~L~~L~l~~n~l~~~~~ 107 (466)
T 1o6v_A 34 TNVTDTVSQ--TDLDQVTTLQADRLGIK-SID-GVEYLNNLTQINFSNNQLTDI-TP-LKNLTKLVDILMNNNQIADITP 107 (466)
T ss_dssp SSTTSEECH--HHHHTCCEEECCSSCCC-CCT-TGGGCTTCCEEECCSSCCCCC-GG-GTTCTTCCEEECCSSCCCCCGG
T ss_pred cccccccCh--hHhccccEEecCCCCCc-cCc-chhhhcCCCEEECCCCccCCc-hh-hhccccCCEEECCCCccccChh
Confidence 344555543 45678999999999988 466 488899999999999999954 44 8999999999999999996555
Q ss_pred ccccCCCCCcEEEcccCcccccCCcccccccccccEEEcccCccCCCCCccccCCCCccEEEccCCcCCCCcCccccCCC
Q 045553 176 AFFGQSPGFQVVSLSFNLLSGSVPEEFGDNCVSLEHILLAANSLTGSIPPSLGNCTELRSLLLSSNMLQGDIPSSFGQLV 255 (1082)
Q Consensus 176 ~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~ 255 (1082)
+..+++|++|++++|++++ ++. ...+++|++|++++|.+++ ++ .+..+++|++|+++ |.+.+.. .+..++
T Consensus 108 --~~~l~~L~~L~L~~n~l~~-~~~--~~~l~~L~~L~l~~n~l~~-~~-~~~~l~~L~~L~l~-~~~~~~~--~~~~l~ 177 (466)
T 1o6v_A 108 --LANLTNLTGLTLFNNQITD-IDP--LKNLTNLNRLELSSNTISD-IS-ALSGLTSLQQLSFG-NQVTDLK--PLANLT 177 (466)
T ss_dssp --GTTCTTCCEEECCSSCCCC-CGG--GTTCTTCSEEEEEEEEECC-CG-GGTTCTTCSEEEEE-ESCCCCG--GGTTCT
T ss_pred --hcCCCCCCEEECCCCCCCC-ChH--HcCCCCCCEEECCCCccCC-Ch-hhccCCcccEeecC-CcccCch--hhccCC
Confidence 8899999999999999884 443 3468889999999998885 33 48888888988886 4555333 388888
Q ss_pred CCCEEeCCCCcCcccCCccccCCCCCcEEEeccccCCcccccCCCCCCcccccCCCcccccCCCCCccccCCCCCcEEEc
Q 045553 256 NLEVLDLSRNFLSGIVPSELGMCKQLKVLVLRNDYGPLYSREHGDLPIQPVVDGGEDYNFFDGGLPDSITRLPNLRVFWA 335 (1082)
Q Consensus 256 ~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~n~~~~~~~~~~~l~~~~~~~~~~~~n~~~~~~p~~l~~l~~L~~L~l 335 (1082)
+|++|++++|.+++. ..+..+++|++|++++|.+ .+..| ++.+++|+.|++
T Consensus 178 ~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l-------------------------~~~~~--~~~l~~L~~L~l 228 (466)
T 1o6v_A 178 TLERLDISSNKVSDI--SVLAKLTNLESLIATNNQI-------------------------SDITP--LGILTNLDELSL 228 (466)
T ss_dssp TCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCC-------------------------CCCGG--GGGCTTCCEEEC
T ss_pred CCCEEECcCCcCCCC--hhhccCCCCCEEEecCCcc-------------------------ccccc--ccccCCCCEEEC
Confidence 888888888888743 3466677777777765432 22222 444555555555
Q ss_pred CCCcccCCCCcccccccCCCeEEcCCccccCCCCccccCCCCCCEEecCCCcCc
Q 045553 336 PNLNLEGIFPQNWELCSKLEMLNLAHNFFTGQIPASLGNCKSLYFLDLSSNNLT 389 (1082)
Q Consensus 336 ~~n~l~~~~~~~l~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~ 389 (1082)
++|.+.+. ..+..+++|++|++++|++++..+ +..+++|+.|++++|+++
T Consensus 229 ~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~ 278 (466)
T 1o6v_A 229 NGNQLKDI--GTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQIS 278 (466)
T ss_dssp CSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCC
T ss_pred CCCCcccc--hhhhcCCCCCEEECCCCccccchh--hhcCCCCCEEECCCCccC
Confidence 55555543 234455555555555555553322 445555555555555544
No 151
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Probab=100.00 E-value=2.5e-36 Score=336.15 Aligned_cols=262 Identities=20% Similarity=0.271 Sum_probs=209.3
Q ss_pred HhcCccccceecccCceEEEEEEE-cCCeEEEEEEeecCccccHHHHHHHHHHHhccCCCceeeEeeee-ccCCeEEEEE
Q 045553 799 ATAGFNVQNCIGSGGFGATYKAEI-IPGVVVAVKRLSVGRFQGVQQFAAEIRTLGRVQHPNLVTLIGYH-VSEAEMFLIY 876 (1082)
Q Consensus 799 ~~~~~~~~~~lg~G~~g~Vy~a~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~-~~~~~~~lV~ 876 (1082)
..++|++.+.||+|+||.||+|+. .+++.||||++...... +++.+|+++++.++|++++..+.++ ......++||
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~--~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~ 84 (296)
T 3uzp_A 7 VGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKH--PQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVM 84 (296)
T ss_dssp ETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCSSC--CHHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEE
T ss_pred eccEEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCcch--hHHHHHHHHHHHhhcCCCCCccccccCCCCceEEEE
Confidence 356899999999999999999975 57999999998765432 4688999999999998866666554 5667889999
Q ss_pred eecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEE---cCCCcEEEeecccceecC
Q 045553 877 NYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILL---DNNLNAYLSDFGLARLLG 953 (1082)
Q Consensus 877 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill---~~~~~~kl~DfGla~~~~ 953 (1082)
||+ +++|.+++... ...+++..+..++.|++.||+|||+. +|+||||||+||++ +.++.+||+|||+++...
T Consensus 85 e~~-~~~L~~~~~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~ 159 (296)
T 3uzp_A 85 ELL-GPSLEDLFNFC-SRKFSLKTVLLLADQMISRIEYIHSK---NFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYR 159 (296)
T ss_dssp ECC-CCBHHHHHHHT-TTCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECCGGGTTCEEECCCTTCEECB
T ss_pred Eec-CCCHHHHHHhh-ccCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHeEEecCCCCCeEEEeeCCCccccc
Confidence 999 99999999854 35699999999999999999999999 99999999999999 488899999999998775
Q ss_pred CCCCc------cccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcC
Q 045553 954 TSETH------ATTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQG 1027 (1082)
Q Consensus 954 ~~~~~------~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 1027 (1082)
..... ......||+.|+|||++.+..++.++||||||+++|||++|+.||...... .................
T Consensus 160 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~-~~~~~~~~~~~~~~~~~ 238 (296)
T 3uzp_A 160 DARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAA-TKRQKYERISEKKMSTP 238 (296)
T ss_dssp CTTTCCBCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCS-SSSSHHHHHHHHHHHSC
T ss_pred ccccccccccccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCcCch-hhhhhhhhhcccccCCc
Confidence 44331 234567999999999999999999999999999999999999999754322 11122222222211111
Q ss_pred CCccccccccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhhC
Q 045553 1028 RPCEFFTAGLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQLKQIQ 1078 (1082)
Q Consensus 1028 ~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L~~i~ 1078 (1082)
.. .+ ....+.++.+++.+|++.+|++||++.||++.|+++.
T Consensus 239 -~~-----~~----~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~ 279 (296)
T 3uzp_A 239 -IE-----VL----CKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLF 279 (296)
T ss_dssp -HH-----HH----TTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHH
T ss_pred -hH-----HH----HhhCCHHHHHHHHHHHhcCcCcCCCHHHHHHHHHHHH
Confidence 00 00 1123467999999999999999999999999998764
No 152
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Probab=100.00 E-value=6.3e-37 Score=348.62 Aligned_cols=267 Identities=19% Similarity=0.250 Sum_probs=205.0
Q ss_pred hcCccccceecccCceEEEEEEEc----CCeEEEEEEeecCccc-----------cHHHHHHHHHHHhccCCCceeeEee
Q 045553 800 TAGFNVQNCIGSGGFGATYKAEII----PGVVVAVKRLSVGRFQ-----------GVQQFAAEIRTLGRVQHPNLVTLIG 864 (1082)
Q Consensus 800 ~~~~~~~~~lg~G~~g~Vy~a~~~----~~~~vavK~~~~~~~~-----------~~~~~~~e~~~l~~l~h~niv~l~~ 864 (1082)
.++|++.+.||+|+||.||+|... ++..||||++...... ....+.+|+..++.++||||+++++
T Consensus 36 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~ 115 (345)
T 2v62_A 36 GNQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYG 115 (345)
T ss_dssp SCEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEE
T ss_pred CceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeec
Confidence 357999999999999999999775 5788999998765321 1234667889999999999999999
Q ss_pred eecc----CCeEEEEEeecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCC-
Q 045553 865 YHVS----EAEMFLIYNYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNL- 939 (1082)
Q Consensus 865 ~~~~----~~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~- 939 (1082)
++.. ....++||||+ +++|.+++.... .+++..++.++.|++.||+|||+. +|+||||||+||+++.++
T Consensus 116 ~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~--~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~ 189 (345)
T 2v62_A 116 SGLTEFKGRSYRFMVMERL-GIDLQKISGQNG--TFKKSTVLQLGIRMLDVLEYIHEN---EYVHGDIKAANLLLGYKNP 189 (345)
T ss_dssp EEEEESSSCEEEEEEEECE-EEEHHHHCBGGG--BCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEESSST
T ss_pred ccccccCCCcEEEEEEecc-CCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCcCHHHEEEccCCC
Confidence 9887 67899999999 999999998753 799999999999999999999999 999999999999999887
Q ss_pred -cEEEeecccceecCCCCCc------cccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCC
Q 045553 940 -NAYLSDFGLARLLGTSETH------ATTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELISDKKALDPSFCSFGN 1012 (1082)
Q Consensus 940 -~~kl~DfGla~~~~~~~~~------~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~ 1012 (1082)
.+||+|||+++.+...... ......||+.|+|||++.+..++.++|||||||++|||++|+.||.....
T Consensus 190 ~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~---- 265 (345)
T 2v62_A 190 DQVYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQNLK---- 265 (345)
T ss_dssp TSEEECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCTTGGGTT----
T ss_pred CcEEEEeCCCceecccccccccchhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCcccccc----
Confidence 9999999999877432211 12445799999999999999999999999999999999999999963211
Q ss_pred CccHHHHHHHHHhcCCCccccccccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhhCCC
Q 045553 1013 GFNIVAWASMLLLQGRPCEFFTAGLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQLKQIQPP 1080 (1082)
Q Consensus 1013 ~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L~~i~~~ 1080 (1082)
................ ...+.... .+...+.++.+++.+||+.+|++||++.+|++.|+++..+
T Consensus 266 ~~~~~~~~~~~~~~~~-~~~~~~~~---~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~ 329 (345)
T 2v62_A 266 DPVAVQTAKTNLLDEL-PQSVLKWA---PSGSSCCEIAQFLVCAHSLAYDEKPNYQALKKILNPHGIP 329 (345)
T ss_dssp CHHHHHHHHHHHHHTT-THHHHHHS---CTTSCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHCTTCCC
T ss_pred ccHHHHHHHHhhcccc-cHHHHhhc---cccccHHHHHHHHHHHhhcCcccCCCHHHHHHHHhccCCc
Confidence 1111222222222211 11111100 0113456899999999999999999999999999987643
No 153
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...
Probab=100.00 E-value=4.9e-37 Score=345.26 Aligned_cols=269 Identities=23% Similarity=0.344 Sum_probs=216.6
Q ss_pred ccHHHHHHHhcCccccceecccCceEEEEEEE------cCCeEEEEEEeecCcc-ccHHHHHHHHHHHhcc-CCCceeeE
Q 045553 791 LTYENVVRATAGFNVQNCIGSGGFGATYKAEI------IPGVVVAVKRLSVGRF-QGVQQFAAEIRTLGRV-QHPNLVTL 862 (1082)
Q Consensus 791 ~~~~~~~~~~~~~~~~~~lg~G~~g~Vy~a~~------~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l-~h~niv~l 862 (1082)
+.........++|++.+.||+|+||.||+|+. .+++.||||++..... ...+.+.+|+++++++ +||||+++
T Consensus 17 ~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~ 96 (316)
T 2xir_A 17 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNL 96 (316)
T ss_dssp CCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCE
T ss_pred ccccceecchhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCCcHHHHHHHHHHHHHHhcccCCCeeeE
Confidence 33444445567899999999999999999964 3468999999976533 3456789999999999 78999999
Q ss_pred eeeeccCC-eEEEEEeecCCCCHHHHHhhCCC--------------CCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecc
Q 045553 863 IGYHVSEA-EMFLIYNYLPGGNLEKFIQDRPR--------------RTVEWSMLHKIALDVARALAYLHDECVPRVLHRD 927 (1082)
Q Consensus 863 ~~~~~~~~-~~~lV~E~~~~gsL~~~l~~~~~--------------~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~D 927 (1082)
++++...+ ..++||||+++++|.+++..... ..+++..+..++.|++.||+|||+. +|+|||
T Consensus 97 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~d 173 (316)
T 2xir_A 97 LGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRD 173 (316)
T ss_dssp EEEECCTTSCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHHT---TCCCSC
T ss_pred EEEEecCCCceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHhC---Cccccc
Confidence 99987654 58999999999999999987542 1289999999999999999999999 999999
Q ss_pred CCCCCEEEcCCCcEEEeecccceecCCCCC-ccccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHh-CCCCCCC
Q 045553 928 IKPSNILLDNNLNAYLSDFGLARLLGTSET-HATTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELIS-DKKALDP 1005 (1082)
Q Consensus 928 lk~~Nill~~~~~~kl~DfGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~ellt-g~~p~~~ 1005 (1082)
|||+||+++.++.+||+|||+++....... .......|++.|+|||++.+..++.++||||||+++|||++ |+.||..
T Consensus 174 ikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~ 253 (316)
T 2xir_A 174 LAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPG 253 (316)
T ss_dssp CSGGGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTT
T ss_pred CccceEEECCCCCEEECCCccccccccCccceeccCCCcceeecCchhhccccccchhHHHHHHHHHHHHHhCCCCCCcc
Confidence 999999999999999999999987654333 22334567889999999999999999999999999999998 9999864
Q ss_pred CccCCCCCccHHHHHHHHHhcCCCccccccccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhhCC
Q 045553 1006 SFCSFGNGFNIVAWASMLLLQGRPCEFFTAGLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQLKQIQP 1079 (1082)
Q Consensus 1006 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L~~i~~ 1079 (1082)
.... ..+......+... ..+...+.++.+++.+|++.+|++||++.||+++|+.+..
T Consensus 254 ~~~~--------~~~~~~~~~~~~~---------~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~ 310 (316)
T 2xir_A 254 VKID--------EEFCRRLKEGTRM---------RAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ 310 (316)
T ss_dssp CCCS--------HHHHHHHHHTCCC---------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred cchh--------HHHHHHhccCccC---------CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHh
Confidence 3211 1112222222111 1223345679999999999999999999999999998753
No 154
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*
Probab=100.00 E-value=2.1e-36 Score=333.28 Aligned_cols=251 Identities=23% Similarity=0.267 Sum_probs=208.0
Q ss_pred HhcCccccceecccCceEEEEEEEc-CCeEEEEEEeecCccccHHHHHHHHHHHhccCCCceeeEeeeeccCCeEEEEEe
Q 045553 799 ATAGFNVQNCIGSGGFGATYKAEII-PGVVVAVKRLSVGRFQGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFLIYN 877 (1082)
Q Consensus 799 ~~~~~~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~E 877 (1082)
..++|++.+.||+|+||.||+|... ++..||+|++........+.+.+|++++++++||||+++++++.+....++|||
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 86 (277)
T 3f3z_A 7 INQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVME 86 (277)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred hhhhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCeEEEEEe
Confidence 3567999999999999999999765 477999999987666677889999999999999999999999999999999999
Q ss_pred ecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEE---cCCCcEEEeecccceecCC
Q 045553 878 YLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILL---DNNLNAYLSDFGLARLLGT 954 (1082)
Q Consensus 878 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill---~~~~~~kl~DfGla~~~~~ 954 (1082)
|+++++|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+||++ +.++.+||+|||++.....
T Consensus 87 ~~~~~~L~~~~~~~--~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~~~~ 161 (277)
T 3f3z_A 87 LCTGGELFERVVHK--RVFRESDAARIMKDVLSAVAYCHKL---NVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKP 161 (277)
T ss_dssp CCCSCBHHHHHHHH--CSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSTTCCEEECCCTTCEECCT
T ss_pred ccCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHEEEecCCCCCcEEEEecccceeccC
Confidence 99999999998874 4689999999999999999999999 99999999999999 7889999999999987654
Q ss_pred CCCccccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCCCccccc
Q 045553 955 SETHATTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQGRPCEFFT 1034 (1082)
Q Consensus 955 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 1034 (1082)
.. ......||+.|+|||++.+. ++.++||||+|+++|||++|+.||... ...+..............
T Consensus 162 ~~--~~~~~~~t~~y~aPE~~~~~-~~~~~Di~slG~~l~~l~~g~~p~~~~--------~~~~~~~~~~~~~~~~~~-- 228 (277)
T 3f3z_A 162 GK--MMRTKVGTPYYVSPQVLEGL-YGPECDEWSAGVMMYVLLCGYPPFSAP--------TDSEVMLKIREGTFTFPE-- 228 (277)
T ss_dssp TS--CBCCCCSCTTTCCHHHHTTC-BCTTHHHHHHHHHHHHHHHSSCSSCCS--------SHHHHHHHHHHCCCCCCH--
T ss_pred cc--chhccCCCCCccChHHhccc-CCchhhehhHHHHHHHHHHCCCCCCCC--------CHHHHHHHHHhCCCCCCc--
Confidence 33 23345799999999998764 899999999999999999999999642 122222222222110000
Q ss_pred cccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 045553 1035 AGLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQ 1072 (1082)
Q Consensus 1035 ~~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~ 1072 (1082)
.. ....+..+.+++.+|++.||++||++.|+++
T Consensus 229 -~~----~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~ 261 (277)
T 3f3z_A 229 -KD----WLNVSPQAESLIRRLLTKSPKQRITSLQALE 261 (277)
T ss_dssp -HH----HTTSCHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred -hh----hhcCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 00 0123568999999999999999999999986
No 155
>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A
Probab=100.00 E-value=1.7e-36 Score=337.37 Aligned_cols=262 Identities=20% Similarity=0.276 Sum_probs=205.1
Q ss_pred HhcCccccceecccCceEEEEEEE-cCCeEEEEEEeecCccccHHHHHHHHHHHhccCCCceeeEeeee-ccCCeEEEEE
Q 045553 799 ATAGFNVQNCIGSGGFGATYKAEI-IPGVVVAVKRLSVGRFQGVQQFAAEIRTLGRVQHPNLVTLIGYH-VSEAEMFLIY 876 (1082)
Q Consensus 799 ~~~~~~~~~~lg~G~~g~Vy~a~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~-~~~~~~~lV~ 876 (1082)
..++|++.+.||+|+||.||+|.. .+++.||||++...... +++.+|+++++.++|++++..+.++ ......++||
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~--~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~ 84 (296)
T 4hgt_A 7 VGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKH--PQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVM 84 (296)
T ss_dssp ----CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC---C--CCHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEE
T ss_pred cCCceEEeeeecCCCCeEEEEEEEcCCCceEEEEeecccccc--hHHHHHHHHHHHhcCCCCCCeeeeecCCCCceEEEE
Confidence 457899999999999999999975 57899999987654322 3578899999999988877666655 5677889999
Q ss_pred eecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEE---cCCCcEEEeecccceecC
Q 045553 877 NYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILL---DNNLNAYLSDFGLARLLG 953 (1082)
Q Consensus 877 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill---~~~~~~kl~DfGla~~~~ 953 (1082)
||+ +++|.+++... ...+++..+..++.|++.||+|||+. +|+||||||+||++ +.++.+||+|||+++...
T Consensus 85 e~~-~~~L~~~~~~~-~~~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a~~~~ 159 (296)
T 4hgt_A 85 ELL-GPSLEDLFNFC-SRKFSLKTVLLLADQMISRIEYIHSK---NFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYR 159 (296)
T ss_dssp ECC-CCBHHHHHHHT-TSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECCGGGTTCEEECCCTTCEECB
T ss_pred Ecc-CCCHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeeeeccCCCCeEEEecCccceecc
Confidence 999 99999999864 34699999999999999999999999 99999999999999 788999999999998875
Q ss_pred CCCCc------cccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcC
Q 045553 954 TSETH------ATTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQG 1027 (1082)
Q Consensus 954 ~~~~~------~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 1027 (1082)
..... ......||+.|+|||++.+..++.++|||||||++|||++|+.||...... .................
T Consensus 160 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~-~~~~~~~~~~~~~~~~~ 238 (296)
T 4hgt_A 160 DARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAA-TKRQKYERISEKKMSTP 238 (296)
T ss_dssp CTTTCCBCCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCS-SSSSHHHHHHHHHHHSC
T ss_pred CcccCccCCCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcccchh-hhhhhhhhhhcccccch
Confidence 44331 233567999999999999999999999999999999999999999754322 11122222222211110
Q ss_pred CCccccccccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhhC
Q 045553 1028 RPCEFFTAGLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQLKQIQ 1078 (1082)
Q Consensus 1028 ~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L~~i~ 1078 (1082)
.. . . ....+.++.+++.+|++.+|++||++.||++.|+++.
T Consensus 239 -~~-~----~----~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~~~ 279 (296)
T 4hgt_A 239 -IE-V----L----CKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLF 279 (296)
T ss_dssp -HH-H----H----TTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHH
T ss_pred -hh-h----h----hccCCHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHH
Confidence 00 0 0 0122468999999999999999999999999998764
No 156
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=4.8e-37 Score=349.96 Aligned_cols=261 Identities=24% Similarity=0.276 Sum_probs=206.3
Q ss_pred HHHHHhcCccccceecccCceEEEEEEE-cCCeEEEEEEeecC-----ccccHHHHHHHHHHHhccCCCceeeEeeeecc
Q 045553 795 NVVRATAGFNVQNCIGSGGFGATYKAEI-IPGVVVAVKRLSVG-----RFQGVQQFAAEIRTLGRVQHPNLVTLIGYHVS 868 (1082)
Q Consensus 795 ~~~~~~~~~~~~~~lg~G~~g~Vy~a~~-~~~~~vavK~~~~~-----~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~ 868 (1082)
++....++|++.+.||+|+||.||+|.. .++..||+|++... .....+.+.+|++++++++||||+++++++.+
T Consensus 20 ~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~ 99 (345)
T 3hko_A 20 SLLELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYED 99 (345)
T ss_dssp CHHHHHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEEC
T ss_pred hhhhhhhheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhcc
Confidence 3456678899999999999999999976 46889999998653 23456789999999999999999999999999
Q ss_pred CCeEEEEEeecCCCCHHHHHhhCC--------------------------------------CCCCCHHHHHHHHHHHHH
Q 045553 869 EAEMFLIYNYLPGGNLEKFIQDRP--------------------------------------RRTVEWSMLHKIALDVAR 910 (1082)
Q Consensus 869 ~~~~~lV~E~~~~gsL~~~l~~~~--------------------------------------~~~l~~~~~~~i~~~i~~ 910 (1082)
.+..++||||+++|+|.+++.... ...+++..++.++.|++.
T Consensus 100 ~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~ 179 (345)
T 3hko_A 100 EQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFS 179 (345)
T ss_dssp SSEEEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHHH
T ss_pred CCeEEEEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHH
Confidence 999999999999999999985210 112467788899999999
Q ss_pred HHHHHhhCCCCCeEeccCCCCCEEEcCCC--cEEEeecccceecCCCCC---ccccCcccCCCcccchhccc--CCCCch
Q 045553 911 ALAYLHDECVPRVLHRDIKPSNILLDNNL--NAYLSDFGLARLLGTSET---HATTDVAGTFGYVAPEYAMT--CRVSDK 983 (1082)
Q Consensus 911 ~L~~LH~~~~~~ivH~Dlk~~Nill~~~~--~~kl~DfGla~~~~~~~~---~~~~~~~gt~~y~aPE~~~~--~~~~~~ 983 (1082)
||+|||+. +|+||||||+||+++.++ .+||+|||+++.+..... .......||+.|+|||++.+ ..++.+
T Consensus 180 ~l~~LH~~---~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~ 256 (345)
T 3hko_A 180 ALHYLHNQ---GICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPK 256 (345)
T ss_dssp HHHHHHHT---TEECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCSSSCCCTH
T ss_pred HHHHHHHC---CccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCchhhccCCCCCCcH
Confidence 99999999 999999999999998776 899999999987643222 22345679999999999975 678999
Q ss_pred hhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCCCccccccccCCCCChHHHHHHHHHHHHcccCCCCC
Q 045553 984 ADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQGRPCEFFTAGLWDCGPHDDLIEMLNLAIMCTGESLSS 1063 (1082)
Q Consensus 984 ~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~p~~ 1063 (1082)
+||||||+++|||++|+.||... ...+.............. ......+..+.+++.+|++.+|++
T Consensus 257 ~DiwslG~il~el~~g~~pf~~~--------~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~li~~~l~~~p~~ 321 (345)
T 3hko_A 257 CDAWSAGVLLHLLLMGAVPFPGV--------NDADTISQVLNKKLCFEN-------PNYNVLSPLARDLLSNLLNRNVDE 321 (345)
T ss_dssp HHHHHHHHHHHHHHHSSCSSCCS--------SHHHHHHHHHHCCCCTTS-------GGGGGSCHHHHHHHHHHSCSCTTT
T ss_pred HHHHHHHHHHHHHHHCCCCCCCC--------ChHHHHHHHHhcccccCC-------cccccCCHHHHHHHHHHcCCChhH
Confidence 99999999999999999999632 222333333332211110 011224568999999999999999
Q ss_pred CCCHHHHHHH
Q 045553 1064 RPSMRQVAQQ 1073 (1082)
Q Consensus 1064 RPt~~ev~~~ 1073 (1082)
||++.|++++
T Consensus 322 Rps~~~~l~h 331 (345)
T 3hko_A 322 RFDAMRALQH 331 (345)
T ss_dssp SCCHHHHHHS
T ss_pred CCCHHHHhcC
Confidence 9999999874
No 157
>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*
Probab=100.00 E-value=2.8e-37 Score=341.57 Aligned_cols=250 Identities=23% Similarity=0.394 Sum_probs=209.5
Q ss_pred HhcCccccceecccCceEEEEEEEc-CCeEEEEEEeecCccccHHHHHHHHHHHhccCCCceeeEeeeecc---------
Q 045553 799 ATAGFNVQNCIGSGGFGATYKAEII-PGVVVAVKRLSVGRFQGVQQFAAEIRTLGRVQHPNLVTLIGYHVS--------- 868 (1082)
Q Consensus 799 ~~~~~~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~--------- 868 (1082)
...+|++.+.||+|+||.||+|... +++.||+|++.... +.+.+|++++++++||||+++++++..
T Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~ 84 (284)
T 2a19_B 9 FGMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN----EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSS 84 (284)
T ss_dssp HHHHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCS----GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC-----
T ss_pred hccccceeeeeccCCceEEEEEEEcCCCeEEEEEEecccc----HHHHHHHHHHHhCCCCCEEEEeeeEeccccCccccc
Confidence 4567999999999999999999775 68999999997654 346789999999999999999998754
Q ss_pred -------CCeEEEEEeecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcE
Q 045553 869 -------EAEMFLIYNYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNA 941 (1082)
Q Consensus 869 -------~~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~ 941 (1082)
....++||||+++++|.+++.......+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+
T Consensus 85 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~ 161 (284)
T 2a19_B 85 KNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSK---KLINRDLKPSNIFLVDTKQV 161 (284)
T ss_dssp ----CCEEEEEEEEECCCCSCBHHHHHHHGGGSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEE
T ss_pred ccccccCcceEEEEEeccCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeccCCHHHEEEcCCCCE
Confidence 45589999999999999999876556799999999999999999999999 99999999999999999999
Q ss_pred EEeecccceecCCCCCccccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHH
Q 045553 942 YLSDFGLARLLGTSETHATTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWAS 1021 (1082)
Q Consensus 942 kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~ 1021 (1082)
||+|||.+........ .....|++.|+|||++.+..++.++||||||+++|||++|..|+... ..+..
T Consensus 162 kl~Dfg~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~----------~~~~~ 229 (284)
T 2a19_B 162 KIGDFGLVTSLKNDGK--RTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFET----------SKFFT 229 (284)
T ss_dssp EECCCTTCEESSCCSC--CCCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHHSCCSSHHHH----------HHHHH
T ss_pred EECcchhheecccccc--ccccCCcccccChhhhccCCCcchhhhHHHHHHHHHHHhcCCcchhH----------HHHHH
Confidence 9999999987754332 23456899999999999999999999999999999999999886421 11111
Q ss_pred HHHhcCCCccccccccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhhCCC
Q 045553 1022 MLLLQGRPCEFFTAGLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQLKQIQPP 1080 (1082)
Q Consensus 1022 ~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L~~i~~~ 1080 (1082)
....+.. +...+..+.+++.+|++.||++||++.|++++|+.++..
T Consensus 230 -~~~~~~~------------~~~~~~~~~~li~~~l~~dp~~Rps~~e~l~~l~~~~~~ 275 (284)
T 2a19_B 230 -DLRDGII------------SDIFDKKEKTLLQKLLSKKPEDRPNTSEILRTLTVWKKS 275 (284)
T ss_dssp -HHHTTCC------------CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHTC-
T ss_pred -Hhhcccc------------cccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhhC
Confidence 1122211 122345788999999999999999999999999988764
No 158
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2.9e-37 Score=353.96 Aligned_cols=256 Identities=28% Similarity=0.457 Sum_probs=196.8
Q ss_pred CccccceecccCceEEEEEEEc--CC--eEEEEEEeecCc-cccHHHHHHHHHHHhccCCCceeeEeeeecc-CCeEEEE
Q 045553 802 GFNVQNCIGSGGFGATYKAEII--PG--VVVAVKRLSVGR-FQGVQQFAAEIRTLGRVQHPNLVTLIGYHVS-EAEMFLI 875 (1082)
Q Consensus 802 ~~~~~~~lg~G~~g~Vy~a~~~--~~--~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~-~~~~~lV 875 (1082)
.|++.+.||+|+||.||+|... ++ ..||||.+.... ....++|.+|+.++++++||||+++++++.. ++..++|
T Consensus 90 ~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~lv 169 (373)
T 3c1x_A 90 IVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVV 169 (373)
T ss_dssp EEEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSSCCEEE
T ss_pred eeecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCCCeEEE
Confidence 4777899999999999999753 22 468999986533 3456789999999999999999999998654 5678999
Q ss_pred EeecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCCC
Q 045553 876 YNYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGTS 955 (1082)
Q Consensus 876 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~ 955 (1082)
|||+++|+|.++++.. ...+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++.....
T Consensus 170 ~e~~~~g~L~~~l~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~ 245 (373)
T 3c1x_A 170 LPYMKHGDLRNFIRNE-THNPTVKDLIGFGLQVAKGMKFLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDK 245 (373)
T ss_dssp EECCTTCBHHHHHHCT-TCCCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCC---------
T ss_pred EECCCCCCHHHHHhhc-ccCCCHHHHHHHHHHHHHHHHHHHHC---CEecCccchheEEECCCCCEEEeecccccccccc
Confidence 9999999999999864 45688999999999999999999999 9999999999999999999999999999866433
Q ss_pred CCc---cccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCccCCCCCccHHHHHHHHHhcCCCcc
Q 045553 956 ETH---ATTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELIS-DKKALDPSFCSFGNGFNIVAWASMLLLQGRPCE 1031 (1082)
Q Consensus 956 ~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1031 (1082)
... ......+++.|+|||++.+..++.++||||||+++|||++ |..||.... ...... . +..+...
T Consensus 246 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~~-----~~~~~~---~-~~~~~~~- 315 (373)
T 3c1x_A 246 EFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVN-----TFDITV---Y-LLQGRRL- 315 (373)
T ss_dssp ------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSC-----SSCHHH---H-HHTTCCC-
T ss_pred ccccccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCCC-----HHHHHH---H-HHcCCCC-
Confidence 221 2234467889999999999999999999999999999999 566665321 112222 1 1222111
Q ss_pred ccccccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhhCC
Q 045553 1032 FFTAGLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQLKQIQP 1079 (1082)
Q Consensus 1032 ~~d~~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L~~i~~ 1079 (1082)
..+...+..+.+++.+||+.+|++||++.|+++.|+++..
T Consensus 316 --------~~p~~~~~~l~~li~~cl~~dp~~RPs~~ell~~L~~i~~ 355 (373)
T 3c1x_A 316 --------LQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFS 355 (373)
T ss_dssp --------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred --------CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence 1233445689999999999999999999999999998743
No 159
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}
Probab=100.00 E-value=1.1e-36 Score=358.47 Aligned_cols=248 Identities=23% Similarity=0.408 Sum_probs=208.3
Q ss_pred hcCccccceecccCceEEEEEEEc-CCeEEEEEEeecCc---cccHHHHHHHHHHHhccCCCceeeEeeeeccCCeEEEE
Q 045553 800 TAGFNVQNCIGSGGFGATYKAEII-PGVVVAVKRLSVGR---FQGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFLI 875 (1082)
Q Consensus 800 ~~~~~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV 875 (1082)
.++|.+.+.||+|+||.||+|+.. +|+.||||++.... ....+.+.+|+++++.++||||+++++++.+.+..++|
T Consensus 15 ~~~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~lv 94 (476)
T 2y94_A 15 IGHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMV 94 (476)
T ss_dssp ETTEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred ecCEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEE
Confidence 357999999999999999999765 69999999996542 23356789999999999999999999999999999999
Q ss_pred EeecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCCC
Q 045553 876 YNYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGTS 955 (1082)
Q Consensus 876 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~ 955 (1082)
|||+++|+|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++......
T Consensus 95 ~E~~~gg~L~~~l~~~--~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDLkp~NIll~~~~~vkL~DFG~a~~~~~~ 169 (476)
T 2y94_A 95 MEYVSGGELFDYICKN--GRLDEKESRRLFQQILSGVDYCHRH---MVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDG 169 (476)
T ss_dssp EECCSSEEHHHHTTSS--SSCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCSGGGEEECTTCCEEECCCSSCEECCTT
T ss_pred EeCCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CCCcccccHHHEEEecCCCeEEEeccchhhcccc
Confidence 9999999999999763 4699999999999999999999999 9999999999999999999999999999876543
Q ss_pred CCccccCcccCCCcccchhcccCCC-CchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCCCccccc
Q 045553 956 ETHATTDVAGTFGYVAPEYAMTCRV-SDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQGRPCEFFT 1034 (1082)
Q Consensus 956 ~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 1034 (1082)
. ......||+.|+|||++.+..+ +.++||||+||++|||++|+.||+... ......... .+..
T Consensus 170 ~--~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~--------~~~~~~~i~-~~~~----- 233 (476)
T 2y94_A 170 E--FLRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDH--------VPTLFKKIC-DGIF----- 233 (476)
T ss_dssp C--CBCCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCSS--------SHHHHHHHH-TTCC-----
T ss_pred c--cccccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCCC--------HHHHHHHHh-cCCc-----
Confidence 2 2344579999999999988765 689999999999999999999997431 122222222 2211
Q ss_pred cccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 045553 1035 AGLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQ 1073 (1082)
Q Consensus 1035 ~~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~ 1073 (1082)
..+.....++.+++.+|++.||++|||+.|++++
T Consensus 234 -----~~p~~~s~~~~~Li~~~L~~dP~~Rpt~~eil~h 267 (476)
T 2y94_A 234 -----YTPQYLNPSVISLLKHMLQVDPMKRATIKDIREH 267 (476)
T ss_dssp -----CCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHTC
T ss_pred -----CCCccCCHHHHHHHHHHcCCCchhCcCHHHHHhC
Confidence 1123344678999999999999999999999873
No 160
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...
Probab=100.00 E-value=7.3e-37 Score=340.81 Aligned_cols=259 Identities=29% Similarity=0.459 Sum_probs=205.0
Q ss_pred hcCccccceecccCceEEEEEEEcC----CeEEEEEEeecCc-cccHHHHHHHHHHHhccCCCceeeEeeeec-cCCeEE
Q 045553 800 TAGFNVQNCIGSGGFGATYKAEIIP----GVVVAVKRLSVGR-FQGVQQFAAEIRTLGRVQHPNLVTLIGYHV-SEAEMF 873 (1082)
Q Consensus 800 ~~~~~~~~~lg~G~~g~Vy~a~~~~----~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~-~~~~~~ 873 (1082)
..+|++.+.||+|+||.||+|...+ +..||+|.+.... ....+.+.+|++++++++||||+++++++. .++..+
T Consensus 24 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 103 (298)
T 3f66_A 24 SLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPL 103 (298)
T ss_dssp GEEEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCE
T ss_pred ceehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccCCCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCCceE
Confidence 3568899999999999999997542 3468999987543 344577899999999999999999999854 556889
Q ss_pred EEEeecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecC
Q 045553 874 LIYNYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLG 953 (1082)
Q Consensus 874 lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~ 953 (1082)
+||||+++|+|.++++.. ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++...
T Consensus 104 ~v~e~~~~~~L~~~l~~~-~~~~~~~~~~~i~~ql~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~a~~~~ 179 (298)
T 3f66_A 104 VVLPYMKHGDLRNFIRNE-THNPTVKDLIGFGLQVAKGMKYLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMY 179 (298)
T ss_dssp EEEECCTTCBHHHHHHCT-TCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTCCEEECSCGGGCCCS
T ss_pred EEEeCCCCCCHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCchheEEECCCCCEEECccccccccc
Confidence 999999999999999764 45689999999999999999999999 99999999999999999999999999998764
Q ss_pred CCCC---ccccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCCCc
Q 045553 954 TSET---HATTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQGRPC 1030 (1082)
Q Consensus 954 ~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1030 (1082)
.... .......|++.|+|||.+.+..++.++||||+|+++|||++|+.|+..... ..... .... .+..
T Consensus 180 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~----~~~~~---~~~~-~~~~- 250 (298)
T 3f66_A 180 DKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVN----TFDIT---VYLL-QGRR- 250 (298)
T ss_dssp CGGGCBC-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTSC----TTTHH---HHHH-TTCC-
T ss_pred ccchhccccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCccCC----HHHHH---HHHh-cCCC-
Confidence 4322 123345678899999999999999999999999999999995554332211 11111 1111 1111
Q ss_pred cccccccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhhCC
Q 045553 1031 EFFTAGLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQLKQIQP 1079 (1082)
Q Consensus 1031 ~~~d~~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L~~i~~ 1079 (1082)
...+...+..+.+++.+|++.+|++||++.|+++.|+++..
T Consensus 251 --------~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~ 291 (298)
T 3f66_A 251 --------LLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFS 291 (298)
T ss_dssp --------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred --------CCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence 11123345679999999999999999999999999998754
No 161
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}
Probab=100.00 E-value=1.3e-36 Score=352.63 Aligned_cols=270 Identities=18% Similarity=0.229 Sum_probs=216.5
Q ss_pred hcCccccceecccCceEEEEEEEc-CCeEEEEEEeecCc-cccHHHHHHHHHHHhccCCCceeeEeeeeccCC--eEEEE
Q 045553 800 TAGFNVQNCIGSGGFGATYKAEII-PGVVVAVKRLSVGR-FQGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEA--EMFLI 875 (1082)
Q Consensus 800 ~~~~~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~--~~~lV 875 (1082)
..+|++.++||+|+||+||+|... +|+.||||++.... ....+.+.+|++++++++||||+++++++.... ..++|
T Consensus 8 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~lv 87 (396)
T 4eut_A 8 NHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLI 87 (396)
T ss_dssp SEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEE
T ss_pred CCceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCeeEEE
Confidence 357999999999999999999765 48999999997543 344677889999999999999999999987654 78999
Q ss_pred EeecCCCCHHHHHhhCC-CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEE----cCCCcEEEeecccce
Q 045553 876 YNYLPGGNLEKFIQDRP-RRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILL----DNNLNAYLSDFGLAR 950 (1082)
Q Consensus 876 ~E~~~~gsL~~~l~~~~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill----~~~~~~kl~DfGla~ 950 (1082)
|||+++|+|.+++.... ...+++..++.++.|++.||+|||+. +|+||||||+||++ +.++.+||+|||+++
T Consensus 88 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~a~ 164 (396)
T 4eut_A 88 MEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLREN---GIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAAR 164 (396)
T ss_dssp ECCCTTEEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEECTTSCEEEEECCGGGCE
T ss_pred EecCCCCCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHHC---CEEECCcCHHHEEEeecCCCceeEEEecCCCce
Confidence 99999999999998643 23499999999999999999999999 99999999999999 778889999999998
Q ss_pred ecCCCCCccccCcccCCCcccchhccc--------CCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHH
Q 045553 951 LLGTSETHATTDVAGTFGYVAPEYAMT--------CRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASM 1022 (1082)
Q Consensus 951 ~~~~~~~~~~~~~~gt~~y~aPE~~~~--------~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~ 1022 (1082)
...... ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||...... ....+.+..
T Consensus 165 ~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~----~~~~~~~~~ 238 (396)
T 4eut_A 165 ELEDDE--QFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGP----RRNKEVMYK 238 (396)
T ss_dssp ECCCGG--GSSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTCT----TTCHHHHHH
T ss_pred EccCCC--ccccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcc----cchHHHHHH
Confidence 765432 2334679999999999865 56788999999999999999999999753322 122333333
Q ss_pred HHhcCCCccccc---------------cccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhhCC
Q 045553 1023 LLLQGRPCEFFT---------------AGLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQLKQIQP 1079 (1082)
Q Consensus 1023 ~~~~~~~~~~~d---------------~~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L~~i~~ 1079 (1082)
..... ...... .......+......+.+++.+|++.||++||++.|+++.++++..
T Consensus 239 ~~~~~-p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ll~~~L~~dP~~R~s~~e~l~~l~~il~ 309 (396)
T 4eut_A 239 IITGK-PSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDILH 309 (396)
T ss_dssp HHHSC-CTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHHT
T ss_pred HhcCC-CcccchhheeccCCCcccCccCCcccccchHHHhhchHHHHHhhccChhhhccHHHHHHHHHHHhh
Confidence 33332 211110 001112346778889999999999999999999999999988754
No 162
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*
Probab=100.00 E-value=1.1e-36 Score=338.15 Aligned_cols=254 Identities=27% Similarity=0.370 Sum_probs=206.7
Q ss_pred hcCccccc-eecccCceEEEEEEEc---CCeEEEEEEeecCcc--ccHHHHHHHHHHHhccCCCceeeEeeeeccCCeEE
Q 045553 800 TAGFNVQN-CIGSGGFGATYKAEII---PGVVVAVKRLSVGRF--QGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMF 873 (1082)
Q Consensus 800 ~~~~~~~~-~lg~G~~g~Vy~a~~~---~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 873 (1082)
..+|++.+ .||+|+||.||+|... +++.||||++..... ...+++.+|++++++++||||+++++++ ..+..+
T Consensus 15 ~~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-~~~~~~ 93 (291)
T 1xbb_A 15 RKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAESWM 93 (291)
T ss_dssp GGGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEE-ESSSEE
T ss_pred chhhhhccCccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEE-CCCCcE
Confidence 45688887 9999999999999543 368899999975432 2357799999999999999999999999 567789
Q ss_pred EEEeecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecC
Q 045553 874 LIYNYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLG 953 (1082)
Q Consensus 874 lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~ 953 (1082)
+||||+++++|.+++... ..+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++....
T Consensus 94 lv~e~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~ 168 (291)
T 1xbb_A 94 LVMEMAELGPLNKYLQQN--RHVKDKNIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALR 168 (291)
T ss_dssp EEEECCTTEEHHHHHHHC--TTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECCCTTCEECC
T ss_pred EEEEeCCCCCHHHHHHhC--cCCCHHHHHHHHHHHHHHHHHHHhC---CeEcCCCCcceEEEeCCCcEEEccCCcceeec
Confidence 999999999999999874 4689999999999999999999999 99999999999999999999999999998775
Q ss_pred CCCCcc--ccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCccCCCCCccHHHHHHHHHhcCCCc
Q 045553 954 TSETHA--TTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELIS-DKKALDPSFCSFGNGFNIVAWASMLLLQGRPC 1030 (1082)
Q Consensus 954 ~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1030 (1082)
...... .....+++.|+|||++.+..++.++||||||+++|||++ |+.||.... ..+.... +..+...
T Consensus 169 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~--------~~~~~~~-~~~~~~~ 239 (291)
T 1xbb_A 169 ADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMK--------GSEVTAM-LEKGERM 239 (291)
T ss_dssp TTCSEEEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCC--------HHHHHHH-HHTTCCC
T ss_pred cCCCcccccccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCCCC--------HHHHHHH-HHcCCCC
Confidence 443321 223346788999999999889999999999999999999 999986421 1222222 2222111
Q ss_pred cccccccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhh
Q 045553 1031 EFFTAGLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQLKQI 1077 (1082)
Q Consensus 1031 ~~~d~~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L~~i 1077 (1082)
..+...+..+.+++.+||+.||++||++.||++.|+++
T Consensus 240 ---------~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~ 277 (291)
T 1xbb_A 240 ---------GCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNY 277 (291)
T ss_dssp ---------CCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHH
T ss_pred ---------CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence 12334567899999999999999999999999999876
No 163
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=5.2e-37 Score=374.19 Aligned_cols=253 Identities=25% Similarity=0.412 Sum_probs=204.3
Q ss_pred Cccccc-eecccCceEEEEEEEc---CCeEEEEEEeecCc-cccHHHHHHHHHHHhccCCCceeeEeeeeccCCeEEEEE
Q 045553 802 GFNVQN-CIGSGGFGATYKAEII---PGVVVAVKRLSVGR-FQGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFLIY 876 (1082)
Q Consensus 802 ~~~~~~-~lg~G~~g~Vy~a~~~---~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 876 (1082)
++.+.+ .||+|+||.||+|.+. ++..||||+++... ....++|.+|++++++++||||+++++++.. +..++||
T Consensus 336 ~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~-~~~~lv~ 414 (613)
T 2ozo_A 336 NLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALMLVM 414 (613)
T ss_dssp SEEEEEEEEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSSTTHHHHHHHHHHHTTCCCTTBCCEEEEEES-SSEEEEE
T ss_pred ceeEcCcEEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEecc-CCeEEEE
Confidence 344444 7999999999999764 46789999997653 3457889999999999999999999999976 5699999
Q ss_pred eecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCCCC
Q 045553 877 NYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGTSE 956 (1082)
Q Consensus 877 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~ 956 (1082)
||+++|+|.+++... ...+++..+..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+++......
T Consensus 415 E~~~~g~L~~~l~~~-~~~l~~~~~~~i~~qi~~~L~~LH~~---~iiHrDlkp~NILl~~~~~vkL~DFGla~~~~~~~ 490 (613)
T 2ozo_A 415 EMAGGGPLHKFLVGK-REEIPVSNVAELLHQVSMGMKYLEEK---NFVHRNLAARNVLLVNRHYAKISDFGLSKALGADD 490 (613)
T ss_dssp ECCTTCBHHHHHTTC-TTTSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCCSTTTTCC---
T ss_pred EeCCCCcHHHHHhhc-cCCCCHHHHHHHHHHHHHHHHHHHHC---CEEcCcCCHHHEEEcCCCcEEEeeccCcccccCCC
Confidence 999999999999765 45699999999999999999999999 99999999999999999999999999998765433
Q ss_pred Ccc--ccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCccCCCCCccHHHHHHHHHhcCCCcccc
Q 045553 957 THA--TTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELIS-DKKALDPSFCSFGNGFNIVAWASMLLLQGRPCEFF 1033 (1082)
Q Consensus 957 ~~~--~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1033 (1082)
... .....+++.|+|||++.+..++.++|||||||++|||++ |+.||.... . .+.... +..+..
T Consensus 491 ~~~~~~~~~~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~-----~---~~~~~~-i~~~~~---- 557 (613)
T 2ozo_A 491 SYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMK-----G---PEVMAF-IEQGKR---- 557 (613)
T ss_dssp -----------CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCC-----S---HHHHHH-HHTTCC----
T ss_pred ceeeeccCCCCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCC-----H---HHHHHH-HHcCCC----
Confidence 221 222345689999999999999999999999999999998 999997432 1 122222 222221
Q ss_pred ccccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhh
Q 045553 1034 TAGLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQLKQI 1077 (1082)
Q Consensus 1034 d~~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L~~i 1077 (1082)
...+...+.++.+++.+||+.+|++||++.+|++.|+.+
T Consensus 558 -----~~~p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~ 596 (613)
T 2ozo_A 558 -----MECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRAC 596 (613)
T ss_dssp -----CCCCTTCCHHHHHHHHHTTCSSTTTSCCHHHHHHHHHHH
T ss_pred -----CCCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHH
Confidence 123445667899999999999999999999999999875
No 164
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Probab=100.00 E-value=2.3e-36 Score=334.24 Aligned_cols=253 Identities=23% Similarity=0.311 Sum_probs=208.3
Q ss_pred HhcCccccceecccCceEEEEEEEc-CCeEEEEEEeecCc--cccHHHHHHHHHHHhccCCCceeeEeeeeccCCeEEEE
Q 045553 799 ATAGFNVQNCIGSGGFGATYKAEII-PGVVVAVKRLSVGR--FQGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFLI 875 (1082)
Q Consensus 799 ~~~~~~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV 875 (1082)
..++|++.+.||+|+||.||+|... +++.||+|++.... ....+.+.+|++++++++||||+++++++.+....++|
T Consensus 4 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v 83 (284)
T 3kk8_A 4 FSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLV 83 (284)
T ss_dssp TTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhhhhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCCEEEEE
Confidence 3578999999999999999999754 58999999997543 23456788999999999999999999999999999999
Q ss_pred EeecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCc---EEEeecccceec
Q 045553 876 YNYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLN---AYLSDFGLARLL 952 (1082)
Q Consensus 876 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~---~kl~DfGla~~~ 952 (1082)
|||+++++|.+++... ..+++..+..++.|++.|++|||+. +|+||||||+||+++.++. +||+|||.+...
T Consensus 84 ~e~~~~~~l~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~~~ 158 (284)
T 3kk8_A 84 FDLVTGGELFEDIVAR--EFYSEADASHCIQQILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEV 158 (284)
T ss_dssp ECCCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESSSSTTCCEEECCCTTCEEC
T ss_pred EecCCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CcCcCCCCHHHEEEecCCCCCcEEEeeceeeEEc
Confidence 9999999999988774 4689999999999999999999999 9999999999999986655 999999999876
Q ss_pred CCCCCccccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCCCccc
Q 045553 953 GTSETHATTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQGRPCEF 1032 (1082)
Q Consensus 953 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1032 (1082)
.... ......|++.|+|||++.+..++.++||||+|+++|+|++|+.||... .................
T Consensus 159 ~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~--------~~~~~~~~~~~~~~~~~- 227 (284)
T 3kk8_A 159 NDSE--AWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDE--------DQHRLYAQIKAGAYDYP- 227 (284)
T ss_dssp CSSC--BCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCS--------SHHHHHHHHHHTCCCCC-
T ss_pred ccCc--cccCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCCC--------chhHHHHHHHhccccCC-
Confidence 5433 233467999999999999999999999999999999999999999632 22222222222211100
Q ss_pred cccccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 045553 1033 FTAGLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQ 1073 (1082)
Q Consensus 1033 ~d~~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~ 1073 (1082)
. ......+.++.+++.+|++.+|++||++.|++++
T Consensus 228 -~-----~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h 262 (284)
T 3kk8_A 228 -S-----PEWDTVTPEAKSLIDSMLTVNPKKRITADQALKV 262 (284)
T ss_dssp -T-----TTTTTSCHHHHHHHHHHSCSSTTTSCCHHHHTTS
T ss_pred -c-----hhhcccCHHHHHHHHHHcccChhhCCCHHHHhcC
Confidence 0 0112334678999999999999999999999874
No 165
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Probab=100.00 E-value=1.2e-36 Score=362.31 Aligned_cols=254 Identities=24% Similarity=0.305 Sum_probs=211.7
Q ss_pred hcCccccceecccCceEEEEEEEc-CCeEEEEEEeecCc---cccHHHHHHHHHHHhccCCCceeeEeeeeccCCeEEEE
Q 045553 800 TAGFNVQNCIGSGGFGATYKAEII-PGVVVAVKRLSVGR---FQGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFLI 875 (1082)
Q Consensus 800 ~~~~~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV 875 (1082)
.++|++.+.||+|+||.||+|... +|+.||||++.... ......+.+|++++++++||||+++++++.+.+..|+|
T Consensus 183 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lV 262 (576)
T 2acx_A 183 KNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLV 262 (576)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred ccceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCCEEEEE
Confidence 456899999999999999999765 68999999996532 23456788999999999999999999999999999999
Q ss_pred EeecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCCC
Q 045553 876 YNYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGTS 955 (1082)
Q Consensus 876 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~ 955 (1082)
|||+++|+|.+++.......+++..+..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+++.....
T Consensus 263 mEy~~gg~L~~~l~~~~~~~l~e~~~~~i~~qIl~aL~yLH~~---gIvHrDLKPeNILld~~g~vKL~DFGla~~~~~~ 339 (576)
T 2acx_A 263 LTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRE---RIVYRDLKPENILLDDHGHIRISDLGLAVHVPEG 339 (576)
T ss_dssp ECCCCSCBHHHHHHSSSSCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCTTCEECCTT
T ss_pred EEcCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHC---CEeccCCchheEEEeCCCCeEEEecccceecccC
Confidence 9999999999999876556699999999999999999999999 9999999999999999999999999999876543
Q ss_pred CCccccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCCCcccccc
Q 045553 956 ETHATTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQGRPCEFFTA 1035 (1082)
Q Consensus 956 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 1035 (1082)
. ......||+.|+|||++.+..++.++||||+||++|||++|+.||..... ............. ..
T Consensus 340 ~--~~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~~~----~~~~~~i~~~i~~-~~------- 405 (576)
T 2acx_A 340 Q--TIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKK----KIKREEVERLVKE-VP------- 405 (576)
T ss_dssp C--CEECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCSSS----CCCHHHHHHHHHH-CC-------
T ss_pred c--cccccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCccccc----chhHHHHHHHhhc-cc-------
Confidence 2 23345799999999999999999999999999999999999999975321 1122222222221 11
Q ss_pred ccCCCCChHHHHHHHHHHHHcccCCCCCCC-----CHHHHHHH
Q 045553 1036 GLWDCGPHDDLIEMLNLAIMCTGESLSSRP-----SMRQVAQQ 1073 (1082)
Q Consensus 1036 ~l~~~~~~~~~~~l~~li~~cl~~~p~~RP-----t~~ev~~~ 1073 (1082)
...+...+.++.+++.+|++.||++|| ++.||+++
T Consensus 406 ---~~~p~~~s~~~~dLI~~lL~~dP~~R~g~~~~sa~eil~H 445 (576)
T 2acx_A 406 ---EEYSERFSPQARSLCSQLLCKDPAERLGCRGGSAREVKEH 445 (576)
T ss_dssp ---CCCCTTSCHHHHHHHHHHTCSSGGGSTTCSSSHHHHHHTS
T ss_pred ---ccCCccCCHHHHHHHHHhccCCHHHcCCCCCCCHHHHHhC
Confidence 112334556899999999999999999 78888754
No 166
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Probab=100.00 E-value=8.7e-37 Score=346.97 Aligned_cols=247 Identities=26% Similarity=0.369 Sum_probs=204.2
Q ss_pred cCccccceecccCceEEEEEEE-cCCeEEEEEEeecCcc---ccHHHHHHHHHHHhccCCCceeeEeeeeccCCeEEEEE
Q 045553 801 AGFNVQNCIGSGGFGATYKAEI-IPGVVVAVKRLSVGRF---QGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFLIY 876 (1082)
Q Consensus 801 ~~~~~~~~lg~G~~g~Vy~a~~-~~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 876 (1082)
..|++.+.||+|+||+||+|.. .+++.||||++..... ...+.+.+|++++++++||||+++++++.+.+..++||
T Consensus 54 ~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 133 (348)
T 1u5q_A 54 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVM 133 (348)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hheeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCeEEEEE
Confidence 4588899999999999999975 5789999999975432 33467889999999999999999999999999999999
Q ss_pred eecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCCCC
Q 045553 877 NYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGTSE 956 (1082)
Q Consensus 877 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~ 956 (1082)
||+. |++.+++... ...+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++.....
T Consensus 134 e~~~-g~l~~~l~~~-~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~- 207 (348)
T 1u5q_A 134 EYCL-GSASDLLEVH-KKPLQEVEIAAVTHGALQGLAYLHSH---NMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPA- 207 (348)
T ss_dssp ECCS-EEHHHHHHHH-TSCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEEETTTEEEECCCTTCBSSSSB-
T ss_pred ecCC-CCHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEECCCCCEEEeeccCceecCCC-
Confidence 9996 6888888654 35789999999999999999999999 9999999999999999999999999999865432
Q ss_pred CccccCcccCCCcccchhcc---cCCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCCCcccc
Q 045553 957 THATTDVAGTFGYVAPEYAM---TCRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQGRPCEFF 1033 (1082)
Q Consensus 957 ~~~~~~~~gt~~y~aPE~~~---~~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1033 (1082)
....||+.|+|||++. +..++.++|||||||++|||++|+.||... .............. ...
T Consensus 208 ----~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~--------~~~~~~~~~~~~~~-~~~- 273 (348)
T 1u5q_A 208 ----NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNM--------NAMSALYHIAQNES-PAL- 273 (348)
T ss_dssp ----CCCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTS--------CHHHHHHHHHHSCC-CCC-
T ss_pred ----CcccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC--------ChHHHHHHHHhcCC-CCC-
Confidence 2357999999999985 567899999999999999999999998632 22233333333221 111
Q ss_pred ccccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHH
Q 045553 1034 TAGLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQL 1074 (1082)
Q Consensus 1034 d~~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L 1074 (1082)
.+...+..+.+++.+||+.+|++|||+.|++++-
T Consensus 274 -------~~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~h~ 307 (348)
T 1u5q_A 274 -------QSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHR 307 (348)
T ss_dssp -------CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHTTCH
T ss_pred -------CCCCCCHHHHHHHHHHcccChhhCcCHHHHhhCh
Confidence 1123456789999999999999999999998653
No 167
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Probab=100.00 E-value=1.5e-36 Score=341.90 Aligned_cols=252 Identities=21% Similarity=0.280 Sum_probs=208.7
Q ss_pred hcCccccceecccCceEEEEEEEc-CCeEEEEEEeecCcc------ccHHHHHHHHHHHhccCCCceeeEeeeeccCCeE
Q 045553 800 TAGFNVQNCIGSGGFGATYKAEII-PGVVVAVKRLSVGRF------QGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEM 872 (1082)
Q Consensus 800 ~~~~~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~~------~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~ 872 (1082)
.++|++.+.||+|+||.||+|... +|+.||||++..... ...+.+.+|++++++++||||+++++++.+....
T Consensus 11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 90 (321)
T 2a2a_A 11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDV 90 (321)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred hccEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEE
Confidence 456999999999999999999765 589999999975432 1367899999999999999999999999999999
Q ss_pred EEEEeecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCC----cEEEeeccc
Q 045553 873 FLIYNYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNL----NAYLSDFGL 948 (1082)
Q Consensus 873 ~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~----~~kl~DfGl 948 (1082)
++||||+++++|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++ .+||+|||+
T Consensus 91 ~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~aL~~lH~~---~ivH~dikp~NIl~~~~~~~~~~~kl~Dfg~ 165 (321)
T 2a2a_A 91 VLILELVSGGELFDFLAQK--ESLSEEEATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGL 165 (321)
T ss_dssp EEEECCCCSCBHHHHHHTC--SCEEHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESCTTSSSCCEEECCCTT
T ss_pred EEEEEcCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCChHHEEEecCCCCcCCEEEccCcc
Confidence 9999999999999999863 4689999999999999999999999 999999999999999888 799999999
Q ss_pred ceecCCCCCccccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCC
Q 045553 949 ARLLGTSETHATTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQGR 1028 (1082)
Q Consensus 949 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 1028 (1082)
+....... ......||+.|+|||++.+..++.++||||||+++|||++|+.||... ...+.........
T Consensus 166 ~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~--------~~~~~~~~i~~~~- 234 (321)
T 2a2a_A 166 AHEIEDGV--EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGD--------TKQETLANITSVS- 234 (321)
T ss_dssp CEECCTTC--CCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCS--------SHHHHHHHHHTTC-
T ss_pred ceecCccc--cccccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCCCCCCCC--------CHHHHHHHHHhcc-
Confidence 98765432 223457999999999999999999999999999999999999999632 2223333222211
Q ss_pred CccccccccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 045553 1029 PCEFFTAGLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQ 1073 (1082)
Q Consensus 1029 ~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~ 1073 (1082)
.. .++.. ....+..+.+++.+|++.||++|||+.|++++
T Consensus 235 ~~--~~~~~----~~~~~~~~~~li~~~l~~dp~~Rps~~e~l~h 273 (321)
T 2a2a_A 235 YD--FDEEF----FSHTSELAKDFIRKLLVKETRKRLTIQEALRH 273 (321)
T ss_dssp CC--CCHHH----HTTCCHHHHHHHHTTSCSSTTTSCCHHHHHHS
T ss_pred cc--cChhh----hcccCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 00 01111 01234578999999999999999999999874
No 168
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Probab=100.00 E-value=4.1e-37 Score=348.69 Aligned_cols=260 Identities=23% Similarity=0.385 Sum_probs=212.6
Q ss_pred HhcCccccceecccCceEEEEEEEcC------CeEEEEEEeecCc-cccHHHHHHHHHHHhcc-CCCceeeEeeeeccCC
Q 045553 799 ATAGFNVQNCIGSGGFGATYKAEIIP------GVVVAVKRLSVGR-FQGVQQFAAEIRTLGRV-QHPNLVTLIGYHVSEA 870 (1082)
Q Consensus 799 ~~~~~~~~~~lg~G~~g~Vy~a~~~~------~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~ 870 (1082)
..++|++.+.||+|+||.||+|.... ...||+|.+.... ....+.+.+|+++++++ +||||+++++++.+.+
T Consensus 44 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~ 123 (333)
T 2i1m_A 44 PRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGG 123 (333)
T ss_dssp CTTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred CHHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccChHHHHHHHHHHHHHHhhcCCCCeeeEEEEEecCC
Confidence 45789999999999999999997642 2479999997653 23456789999999999 8999999999999999
Q ss_pred eEEEEEeecCCCCHHHHHhhCC------------CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCC
Q 045553 871 EMFLIYNYLPGGNLEKFIQDRP------------RRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNN 938 (1082)
Q Consensus 871 ~~~lV~E~~~~gsL~~~l~~~~------------~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~ 938 (1082)
..++||||+++|+|.+++.... ...+++..++.++.|++.||+|||+. +|+||||||+||+++.+
T Consensus 124 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~NIl~~~~ 200 (333)
T 2i1m_A 124 PVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASK---NCIHRDVAARNVLLTNG 200 (333)
T ss_dssp SCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGCEEEGG
T ss_pred ceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhcC---CcccCCcccceEEECCC
Confidence 9999999999999999997532 34589999999999999999999999 99999999999999999
Q ss_pred CcEEEeecccceecCCCCCc-cccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCccCCCCCccH
Q 045553 939 LNAYLSDFGLARLLGTSETH-ATTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELIS-DKKALDPSFCSFGNGFNI 1016 (1082)
Q Consensus 939 ~~~kl~DfGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~ellt-g~~p~~~~~~~~~~~~~~ 1016 (1082)
+.+||+|||+++........ ......|++.|+|||++.+..++.++||||||+++|||++ |..||......
T Consensus 201 ~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~------- 273 (333)
T 2i1m_A 201 HVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVN------- 273 (333)
T ss_dssp GEEEBCCCGGGCCGGGCTTSEECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCSS-------
T ss_pred CeEEECccccccccccccceeecCCCCCCccccCHHHhccCCCChHHHHHHHHHHHHHHHcCCCCCCcccchh-------
Confidence 99999999999876443322 2334567889999999999999999999999999999998 88898643211
Q ss_pred HHHHHHHHhcCCCccccccccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhhC
Q 045553 1017 VAWASMLLLQGRPCEFFTAGLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQLKQIQ 1078 (1082)
Q Consensus 1017 ~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L~~i~ 1078 (1082)
.........+.. ...+...+..+.+++.+|++.+|++||++.||++.|+++.
T Consensus 274 -~~~~~~~~~~~~---------~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~ 325 (333)
T 2i1m_A 274 -SKFYKLVKDGYQ---------MAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQEQA 325 (333)
T ss_dssp -HHHHHHHHHTCC---------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred -HHHHHHHhcCCC---------CCCCCCCCHHHHHHHHHHhccChhhCcCHHHHHHHHHHHH
Confidence 111222222211 1122334568999999999999999999999999998764
No 169
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A {Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=7.8e-37 Score=336.30 Aligned_cols=246 Identities=23% Similarity=0.338 Sum_probs=184.7
Q ss_pred cCccccceecccCceEEEEEEE-cCCeEEEEEEeecCc---cccHHHHHHHHHHHhccCCCceeeEeeeeccCCeEEEEE
Q 045553 801 AGFNVQNCIGSGGFGATYKAEI-IPGVVVAVKRLSVGR---FQGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFLIY 876 (1082)
Q Consensus 801 ~~~~~~~~lg~G~~g~Vy~a~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 876 (1082)
++|++.+.||+|+||.||+|.. .+++.||+|++.... ....+.+.+|++++++++||||+++++++.+.+..++||
T Consensus 13 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 92 (275)
T 2eue_A 13 GNYQIVKTLGEGSFAKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVI 92 (275)
T ss_dssp CCBCCCC---------EEEEECTTTCCEEEEEEECSCC-----CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSCEEEEE
T ss_pred cceEEEEEEEcCCCEEEEEEEECCCCCEEEEEEEEhhhcchHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCeEEEEe
Confidence 5799999999999999999964 468999999987543 233567899999999999999999999999999999999
Q ss_pred eecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCCCC
Q 045553 877 NYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGTSE 956 (1082)
Q Consensus 877 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~ 956 (1082)
||+ ++++.+++... ..+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||++.......
T Consensus 93 e~~-~~~l~~~~~~~--~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 166 (275)
T 2eue_A 93 EYA-GNELFDYIVQR--DKMSEQEARRFFQQIISAVEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGN 166 (275)
T ss_dssp ECC-CEEHHHHHHTS--SSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTSCEEECCSSCC-------
T ss_pred hhc-CCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CCeeccCChHhEEECCCCCEEEeecccceeccCcc
Confidence 999 77888888764 4699999999999999999999999 99999999999999999999999999998664332
Q ss_pred CccccCcccCCCcccchhcccCCC-CchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCCCcccccc
Q 045553 957 THATTDVAGTFGYVAPEYAMTCRV-SDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQGRPCEFFTA 1035 (1082)
Q Consensus 957 ~~~~~~~~gt~~y~aPE~~~~~~~-~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 1035 (1082)
. .....||+.|+|||++.+..+ +.++||||+|+++|||++|+.||... ............. .
T Consensus 167 ~--~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~--------~~~~~~~~~~~~~-~------ 229 (275)
T 2eue_A 167 F--LKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDE--------SIPVLFKNISNGV-Y------ 229 (275)
T ss_dssp ----------CTTCCHHHHCC-----THHHHHHHHHHHHHHHHSSCSSCCS--------SHHHHHHHHHHTC-C------
T ss_pred c--ccCCCCCcCcCCceeeeCCCCCCcccchHHHHHHHHHHHhCCCCCCCC--------CHHHHHHHHHhCC-C------
Confidence 2 234568999999999988765 78999999999999999999999732 2222222222221 1
Q ss_pred ccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 045553 1036 GLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQ 1073 (1082)
Q Consensus 1036 ~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~ 1073 (1082)
..+...+..+.+++.+|++.||++|||+.|++++
T Consensus 230 ----~~~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~h 263 (275)
T 2eue_A 230 ----TLPKFLSPGAAGLIKRMLIVNPLNRISIHEIMQD 263 (275)
T ss_dssp ----CCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTC
T ss_pred ----CCCccCCHHHHHHHHHHhhcCHhHCCCHHHHhhC
Confidence 1223345678999999999999999999999763
No 170
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*
Probab=100.00 E-value=2.7e-36 Score=338.24 Aligned_cols=261 Identities=25% Similarity=0.415 Sum_probs=203.4
Q ss_pred hcCccccceecccCceEEEEEEE-cCCeEEEEEEeecCc---cccHHHHHHHHHHHhccCCCceeeEeeeeccCCeEEEE
Q 045553 800 TAGFNVQNCIGSGGFGATYKAEI-IPGVVVAVKRLSVGR---FQGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFLI 875 (1082)
Q Consensus 800 ~~~~~~~~~lg~G~~g~Vy~a~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV 875 (1082)
..+|++.+.||+|+||.||+|.. .+|+.||||++.... ....+.+.+|++++++++||||+++++++...+..++|
T Consensus 31 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv 110 (310)
T 2wqm_A 31 LANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIV 110 (310)
T ss_dssp GGGEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEE
T ss_pred ccceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCcEEEE
Confidence 45799999999999999999975 468999999997532 34456788999999999999999999999999999999
Q ss_pred EeecCCCCHHHHHhhC--CCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecC
Q 045553 876 YNYLPGGNLEKFIQDR--PRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLG 953 (1082)
Q Consensus 876 ~E~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~ 953 (1082)
|||+++++|.+++... ....+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++....
T Consensus 111 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dl~p~NIl~~~~~~~kl~Dfg~~~~~~ 187 (310)
T 2wqm_A 111 LELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSR---RVMHRDIKPANVFITATGVVKLGDLGLGRFFS 187 (310)
T ss_dssp EECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCC-------
T ss_pred EecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCcHHHEEEcCCCCEEEEeccceeeec
Confidence 9999999999999752 245689999999999999999999999 99999999999999999999999999998764
Q ss_pred CCCCccccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCCCcccc
Q 045553 954 TSETHATTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQGRPCEFF 1033 (1082)
Q Consensus 954 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1033 (1082)
.... ......|++.|+|||++.+..++.++||||||+++|||++|+.||... ............ .......
T Consensus 188 ~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~------~~~~~~~~~~~~-~~~~~~~- 258 (310)
T 2wqm_A 188 SKTT-AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGD------KMNLYSLCKKIE-QCDYPPL- 258 (310)
T ss_dssp ------------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC---------CCHHHHHHHHH-TTCSCCC-
T ss_pred CCCc-cccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCccc------chhHHHHHHHhh-cccCCCC-
Confidence 3322 223456899999999999999999999999999999999999998642 222333333332 2221111
Q ss_pred ccccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhhCC
Q 045553 1034 TAGLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQLKQIQP 1079 (1082)
Q Consensus 1034 d~~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L~~i~~ 1079 (1082)
.+...+.++.+++.+|++.||++||++.||++.|+++.+
T Consensus 259 -------~~~~~~~~l~~li~~~l~~dp~~Rps~~~il~~l~~l~~ 297 (310)
T 2wqm_A 259 -------PSDHYSEELRQLVNMCINPDPEKRPDVTYVYDVAKRMHA 297 (310)
T ss_dssp -------CTTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred -------cccccCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHH
Confidence 112345689999999999999999999999999998753
No 171
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}
Probab=100.00 E-value=2.9e-36 Score=342.16 Aligned_cols=271 Identities=24% Similarity=0.371 Sum_probs=202.1
Q ss_pred hcCccccceecccCceEEEEEEEcCCeEEEEEEeecCccccHHHHHHHHHH--HhccCCCceeeEeeeec-----cCCeE
Q 045553 800 TAGFNVQNCIGSGGFGATYKAEIIPGVVVAVKRLSVGRFQGVQQFAAEIRT--LGRVQHPNLVTLIGYHV-----SEAEM 872 (1082)
Q Consensus 800 ~~~~~~~~~lg~G~~g~Vy~a~~~~~~~vavK~~~~~~~~~~~~~~~e~~~--l~~l~h~niv~l~~~~~-----~~~~~ 872 (1082)
.++|++.+.||+|+||.||+|+. +++.||||++.... ...+..|.++ +..++||||+++++++. ....+
T Consensus 12 ~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~---~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~ 87 (336)
T 3g2f_A 12 LDNLKLLELIGRGRYGAVYKGSL-DERPVAVKVFSFAN---RQNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRMEY 87 (336)
T ss_dssp TTSEEEEEEEEECSSEEEEEEEE-TTEEEEEEEEEGGG---HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCEEE
T ss_pred hHHhheeeecccCCCeEEEEEEE-CCeEEEEEEeeccc---hhhHHHHHHHHHHHhccCcchhhheecccccccCCCceE
Confidence 46799999999999999999976 58999999997543 3344444444 55689999999997443 33467
Q ss_pred EEEEeecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCC------CCCeEeccCCCCCEEEcCCCcEEEeec
Q 045553 873 FLIYNYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDEC------VPRVLHRDIKPSNILLDNNLNAYLSDF 946 (1082)
Q Consensus 873 ~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~------~~~ivH~Dlk~~Nill~~~~~~kl~Df 946 (1082)
++||||+++|+|.+++... ..++..+..++.|++.||+|||+.+ .++|+||||||+||+++.++.+||+||
T Consensus 88 ~lv~e~~~~g~L~~~l~~~---~~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kL~DF 164 (336)
T 3g2f_A 88 LLVMEYYPNGSLXKYLSLH---TSDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDF 164 (336)
T ss_dssp EEEECCCTTCBHHHHHHHC---CBCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCCEECSSCSGGGEEECTTSCEEECCC
T ss_pred EEEEecCCCCcHHHHHhhc---ccchhHHHHHHHHHHHHHHHHHhhhccccccccceeecccccceEEEcCCCcEEEeec
Confidence 9999999999999999864 4589999999999999999999873 238999999999999999999999999
Q ss_pred ccceecCCCCC-------ccccCcccCCCcccchhccc-------CCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCC
Q 045553 947 GLARLLGTSET-------HATTDVAGTFGYVAPEYAMT-------CRVSDKADVYSFGVVLLELISDKKALDPSFCSFGN 1012 (1082)
Q Consensus 947 Gla~~~~~~~~-------~~~~~~~gt~~y~aPE~~~~-------~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~ 1012 (1082)
|+++.+..... .......||+.|+|||++.+ ..++.++|||||||++|||++|+.||.+.......
T Consensus 165 G~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~~ 244 (336)
T 3g2f_A 165 GLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGESVPEY 244 (336)
T ss_dssp TTCEECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGSTTSCCCCC
T ss_pred cceeecccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcCCCccchhHH
Confidence 99987653221 12234579999999999987 45667899999999999999998887543222111
Q ss_pred C----------ccHHHHHHHHHhcCCCccccccccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhhCCC
Q 045553 1013 G----------FNIVAWASMLLLQGRPCEFFTAGLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQLKQIQPP 1080 (1082)
Q Consensus 1013 ~----------~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L~~i~~~ 1080 (1082)
. .....+............ +.... ......+..+.+++.+||+.||++|||+.||++.|+++..+
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~--~~~~~~~~~l~~li~~cl~~dP~~Rps~~e~l~~L~~ll~~ 319 (336)
T 3g2f_A 245 QMAFQTEVGNHPTFEDMQVLVSREKQRPK-FPEAW--KENSLAVRSLKETIEDCWDQDAEARLTAQXAEERMAELMMI 319 (336)
T ss_dssp CCTTHHHHCSSCCHHHHHHHHTTSCCCCC-CCTTC--CCCSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred HHhhhcccCCCchHHHHHhhhcccccCCC-CCccc--ccccchHHHHHHHHHHHhcCChhhCcchHHHHHHHHHHHHH
Confidence 1 111111111111111111 11111 11234677899999999999999999999999999987643
No 172
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Probab=100.00 E-value=9.7e-37 Score=349.55 Aligned_cols=208 Identities=26% Similarity=0.349 Sum_probs=183.1
Q ss_pred ccccHHHHHHHhcCccccceecccCceEEEEEEE-cCCeEEEEEEeecCccccHHHHHHHHHHHhccC-----CCceeeE
Q 045553 789 VQLTYENVVRATAGFNVQNCIGSGGFGATYKAEI-IPGVVVAVKRLSVGRFQGVQQFAAEIRTLGRVQ-----HPNLVTL 862 (1082)
Q Consensus 789 ~~~~~~~~~~~~~~~~~~~~lg~G~~g~Vy~a~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-----h~niv~l 862 (1082)
..+++++.....++|++.++||+|+||+||+|+. .+++.||||++... ....+.+..|+++++.++ ||||+++
T Consensus 23 ~~~~~~~g~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~h~~iv~~ 101 (360)
T 3llt_A 23 VHFSWKKGMLLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNI-KKYTRSAKIEADILKKIQNDDINNNNIVKY 101 (360)
T ss_dssp GSCCCCTTCEETTTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC-HHHHHHHHHHHHHHHHTCCCSTTGGGBCCE
T ss_pred eeeeeecceEecCEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEeccc-hhhhhhhHHHHHHHHHhcccCCCCCCeecc
Confidence 3455555556678999999999999999999976 46899999998743 234566788999999986 9999999
Q ss_pred eeeeccCCeEEEEEeecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcC-----
Q 045553 863 IGYHVSEAEMFLIYNYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDN----- 937 (1082)
Q Consensus 863 ~~~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~----- 937 (1082)
++++...+..++||||+ +++|.+++.......+++..+..++.|++.||+|||+. +|+||||||+||+++.
T Consensus 102 ~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~~ 177 (360)
T 3llt_A 102 HGKFMYYDHMCLIFEPL-GPSLYEIITRNNYNGFHIEDIKLYCIEILKALNYLRKM---SLTHTDLKPENILLDDPYFEK 177 (360)
T ss_dssp EEEEEETTEEEEEECCC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCTTCCE
T ss_pred cceeeECCeeEEEEcCC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCcccEEEccccccc
Confidence 99999999999999999 99999999987666799999999999999999999999 9999999999999975
Q ss_pred --------------------CCcEEEeecccceecCCCCCccccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHH
Q 045553 938 --------------------NLNAYLSDFGLARLLGTSETHATTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELI 997 (1082)
Q Consensus 938 --------------------~~~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~ell 997 (1082)
++.+||+|||+++..... .....||+.|+|||++.+..++.++||||+||++|||+
T Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell 253 (360)
T 3llt_A 178 SLITVRRVTDGKKIQIYRTKSTGIKLIDFGCATFKSDY----HGSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAELY 253 (360)
T ss_dssp EEEEEECTTTCCEEEEEEESCCCEEECCCTTCEETTSC----CCSCCSCGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHH
T ss_pred cccchhcccccccccccccCCCCEEEEeccCceecCCC----CcCccCcccccCcHHHcCCCCCCccchHHHHHHHHHHH
Confidence 789999999999875432 23457899999999999999999999999999999999
Q ss_pred hCCCCCCC
Q 045553 998 SDKKALDP 1005 (1082)
Q Consensus 998 tg~~p~~~ 1005 (1082)
+|+.||..
T Consensus 254 ~g~~pf~~ 261 (360)
T 3llt_A 254 TGSLLFRT 261 (360)
T ss_dssp HSSCSCCC
T ss_pred HCCCCCCC
Confidence 99999974
No 173
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}
Probab=100.00 E-value=1.8e-36 Score=339.39 Aligned_cols=264 Identities=23% Similarity=0.297 Sum_probs=201.6
Q ss_pred HhcCccccceecccCceEEEEEEE-cCCeEEEEEEeecCcc-----ccHHHHHHHHHHHhccC---CCceeeEeeeeccC
Q 045553 799 ATAGFNVQNCIGSGGFGATYKAEI-IPGVVVAVKRLSVGRF-----QGVQQFAAEIRTLGRVQ---HPNLVTLIGYHVSE 869 (1082)
Q Consensus 799 ~~~~~~~~~~lg~G~~g~Vy~a~~-~~~~~vavK~~~~~~~-----~~~~~~~~e~~~l~~l~---h~niv~l~~~~~~~ 869 (1082)
..++|++.+.||+|+||+||+|.. .+++.||||++..... .....+.+|++++++++ ||||+++++++...
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~ 86 (308)
T 3g33_A 7 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATS 86 (308)
T ss_dssp ---CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEEC
T ss_pred cccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeecc
Confidence 467899999999999999999974 5689999999864321 12345667777776664 99999999998765
Q ss_pred C-----eEEEEEeecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEe
Q 045553 870 A-----EMFLIYNYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLS 944 (1082)
Q Consensus 870 ~-----~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~ 944 (1082)
. ..++||||+. ++|.+++.......+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+
T Consensus 87 ~~~~~~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~Nil~~~~~~~kl~ 162 (308)
T 3g33_A 87 RTDREIKVTLVFEHVD-QDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHAN---CIVHRDLKPENILVTSGGTVKLA 162 (308)
T ss_dssp CSSSEEEEEEEEECCC-CBHHHHHHTCCTTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCTTTEEECTTSCEEEC
T ss_pred CCCCceeEEEEehhhh-cCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEcCCCCEEEe
Confidence 4 5899999995 6999999987666699999999999999999999999 99999999999999999999999
Q ss_pred ecccceecCCCCCccccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHH
Q 045553 945 DFGLARLLGTSETHATTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLL 1024 (1082)
Q Consensus 945 DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 1024 (1082)
|||+++...... ......||+.|+|||++.+..++.++||||+||++|||++|+.||.... .......+....
T Consensus 163 Dfg~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~-----~~~~~~~i~~~~ 235 (308)
T 3g33_A 163 DFGLARIYSYQM--ALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNS-----EADQLGKIFDLI 235 (308)
T ss_dssp SCSCTTTSTTCC--CSGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSSCSCCCSS-----HHHHHHHHHHHH
T ss_pred eCccccccCCCc--ccCCccccccccCchHHcCCCCCchHHHHHHHHHHHHHHhCCCCCCCCC-----HHHHHHHHHHHh
Confidence 999998664332 2344678999999999999999999999999999999999999996421 111111111111
Q ss_pred hcCCCccccc------cccCC--C-----CChHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 045553 1025 LQGRPCEFFT------AGLWD--C-----GPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQ 1073 (1082)
Q Consensus 1025 ~~~~~~~~~d------~~l~~--~-----~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~ 1073 (1082)
.......+.. ..... . ...+....+.+++.+|++.||++|||+.|++++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 297 (308)
T 3g33_A 236 GLPPEDDWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQH 297 (308)
T ss_dssp CCCCTTTSCSSCSSCGGGSCCCCCCCHHHHSCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred CCCChhhccchhhccccccCCCCCCcHHHhCccccHHHHHHHHHHhcCCCccCCCHHHHhcC
Confidence 1111000000 00000 0 012345678999999999999999999999864
No 174
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...
Probab=100.00 E-value=1.3e-36 Score=335.29 Aligned_cols=248 Identities=27% Similarity=0.396 Sum_probs=204.6
Q ss_pred HhcCccccceecccCceEEEEEEEc-CCeEEEEEEeecCc---cccHHHHHHHHHHHhccCCCceeeEeeeeccCCeEEE
Q 045553 799 ATAGFNVQNCIGSGGFGATYKAEII-PGVVVAVKRLSVGR---FQGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFL 874 (1082)
Q Consensus 799 ~~~~~~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 874 (1082)
+.++|++.+.||+|+||.||+|... ++..||||++.... ......+.+|++++++++||||+++++++.+....++
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 86 (279)
T 3fdn_A 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYL 86 (279)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEE
T ss_pred ecccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEecCCEEEE
Confidence 3467999999999999999999655 47799999986532 2335678899999999999999999999999999999
Q ss_pred EEeecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCC
Q 045553 875 IYNYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGT 954 (1082)
Q Consensus 875 V~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~ 954 (1082)
||||+++++|.+++... ..+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||++.....
T Consensus 87 v~e~~~~~~l~~~l~~~--~~~~~~~~~~~~~qi~~~l~~LH~~---~i~H~dlkp~Nili~~~~~~~l~Dfg~~~~~~~ 161 (279)
T 3fdn_A 87 ILEYAPLGTVYRELQKL--SKFDEQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPS 161 (279)
T ss_dssp EECCCTTEEHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHTT---TCEECCCCGGGEEECTTSCEEECSCCEESCC--
T ss_pred EEecCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhC---CEecccCChHhEEEcCCCCEEEEeccccccCCc
Confidence 99999999999999874 4689999999999999999999999 999999999999999999999999999865432
Q ss_pred CCCccccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCCCccccc
Q 045553 955 SETHATTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQGRPCEFFT 1034 (1082)
Q Consensus 955 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 1034 (1082)
. ......|++.|+|||.+.+..++.++||||+|+++|||++|+.||... .............
T Consensus 162 ~---~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~--------~~~~~~~~~~~~~------- 223 (279)
T 3fdn_A 162 S---RRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN--------TYQETYKRISRVE------- 223 (279)
T ss_dssp ---------CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCS--------SHHHHHHHHHHTC-------
T ss_pred c---cccccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCCC--------cHHHHHHHHHhCC-------
Confidence 2 223457899999999999999999999999999999999999999632 2222222222211
Q ss_pred cccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 045553 1035 AGLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQ 1073 (1082)
Q Consensus 1035 ~~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~ 1073 (1082)
...+...+..+.+++.+|++.+|++||++.|++++
T Consensus 224 ----~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~h 258 (279)
T 3fdn_A 224 ----FTFPDFVTEGARDLISRLLKHNPSQRPMLREVLEH 258 (279)
T ss_dssp ----CCCCTTSCHHHHHHHHHHCCSSGGGSCCHHHHHHC
T ss_pred ----CCCCCcCCHHHHHHHHHHhccChhhCCCHHHHhhC
Confidence 01233345678999999999999999999999875
No 175
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3hmm_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=1.9e-38 Score=354.54 Aligned_cols=265 Identities=23% Similarity=0.323 Sum_probs=191.7
Q ss_pred hcCccccceecccCceEEEEEEEcCCeEEEEEEeecCccccHHHHHHHHHHHhc--cCCCceeeEeeeeccCC----eEE
Q 045553 800 TAGFNVQNCIGSGGFGATYKAEIIPGVVVAVKRLSVGRFQGVQQFAAEIRTLGR--VQHPNLVTLIGYHVSEA----EMF 873 (1082)
Q Consensus 800 ~~~~~~~~~lg~G~~g~Vy~a~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~--l~h~niv~l~~~~~~~~----~~~ 873 (1082)
.++|++.+.||+|+||.||+|+.. ++.||||++... ....+.+|.+++.. ++||||+++++++.... ..+
T Consensus 2 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~---~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~ 77 (303)
T 3gxj_A 2 ARTIVLQESIGKGRFGEVWRGKWR-GEEVAVKIFSSR---EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLW 77 (303)
T ss_dssp GGGCCCCEEEEECSSSEEEEC-CT-TSCEEEEECC-T---THHHHHHHHHHHTSTTCCC-CBCCEEEEEEEECSSSEEEE
T ss_pred cceeeehhhccCCCCeEEEEEEEc-CcceEEEEeccc---chhhHHHHHHHHHHHhccCcceeeeeeecccCCCccceeE
Confidence 357999999999999999999765 899999998643 34567788888887 79999999999998766 789
Q ss_pred EEEeecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHh--------hCCCCCeEeccCCCCCEEEcCCCcEEEee
Q 045553 874 LIYNYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLH--------DECVPRVLHRDIKPSNILLDNNLNAYLSD 945 (1082)
Q Consensus 874 lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH--------~~~~~~ivH~Dlk~~Nill~~~~~~kl~D 945 (1082)
+||||+++|+|.++++.. .+++..+..++.|++.|++||| +. +|+||||||+||+++.++.+||+|
T Consensus 78 lv~e~~~~g~L~~~l~~~---~~~~~~~~~~~~~i~~~l~~lH~~~~~~~~~~---~ivH~Dlkp~Nil~~~~~~~kl~D 151 (303)
T 3gxj_A 78 LVSDYHEHGSLFDYLNRY---TVTVEGMIKLALSTASGLAHLHMEIVGTQGKP---AIAHRDLKSKNILVKKNGTCCIAD 151 (303)
T ss_dssp EEEECCTTCCHHHHHHHC---CBCC-CHHHHC-CHHHHHC-CCCCBCSTTCBC----CCCSCCCGGGC-CCTTCCC-BCC
T ss_pred EEEeccCCCCHHHHHhcc---CcchHHHHHHHHHHHHHHHHHHHHHhhhccCC---CEeeCcCCHHHeEECCCCCEEEee
Confidence 999999999999999764 5788899999999999999999 77 999999999999999999999999
Q ss_pred cccceecCCCCCc---cccCcccCCCcccchhcccC------CCCchhhHHHHHHHHHHHHhC----------CCCCCCC
Q 045553 946 FGLARLLGTSETH---ATTDVAGTFGYVAPEYAMTC------RVSDKADVYSFGVVLLELISD----------KKALDPS 1006 (1082)
Q Consensus 946 fGla~~~~~~~~~---~~~~~~gt~~y~aPE~~~~~------~~~~~~Dv~slGvll~elltg----------~~p~~~~ 1006 (1082)
||+++........ ......||+.|+|||++.+. .++.++|||||||++|||++| ..||...
T Consensus 152 Fg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~p~~~~ 231 (303)
T 3gxj_A 152 LGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDL 231 (303)
T ss_dssp CCC-CCEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHC-CCCC-CTGGGBCBTTBC-CCCCTTTTT
T ss_pred cCcceeccCCCcccccccCCCCcCccccCHhhhcCcccccccccCcchhHHHHHHHHHHHHhcCCCccccceeecccccc
Confidence 9999766443322 12334799999999999876 444689999999999999999 5555432
Q ss_pred ccCCCCCccHHHHHHHHHhcCCCccccccccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhhCCCC
Q 045553 1007 FCSFGNGFNIVAWASMLLLQGRPCEFFTAGLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQLKQIQPPA 1081 (1082)
Q Consensus 1007 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L~~i~~~~ 1081 (1082)
........ ..... .............. ........+.+++.+||+.||++|||+.||++.|+++....
T Consensus 232 ~~~~~~~~---~~~~~-~~~~~~~~~~~~~~---~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~l~~~~ 299 (303)
T 3gxj_A 232 VPSDPSVE---EMRKV-VCEQKLRPNIPNRW---QSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQE 299 (303)
T ss_dssp CC-CCCCC----CHHH-HTTSCCCCCCCGGG---GSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHC-CCC-
T ss_pred CCCCccHH---HHHHH-HHHhhcCCCccccc---cchhhHHHHHHHHHHHhccCcccCCCHHHHHHHHHHhhhhc
Confidence 22111111 11111 11111111111110 12366778999999999999999999999999999988653
No 176
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.3e-36 Score=338.81 Aligned_cols=256 Identities=29% Similarity=0.443 Sum_probs=206.5
Q ss_pred CccccceecccCceEEEEEEEcC-C---eEEEEEEeecCc-cccHHHHHHHHHHHhccCCCceeeEeeeeccCCeE-EEE
Q 045553 802 GFNVQNCIGSGGFGATYKAEIIP-G---VVVAVKRLSVGR-FQGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEM-FLI 875 (1082)
Q Consensus 802 ~~~~~~~lg~G~~g~Vy~a~~~~-~---~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~-~lV 875 (1082)
.|++.++||+|+||+||+|...+ + ..||+|++.... ....+.+.+|++++++++||||+++++++.+.+.. ++|
T Consensus 22 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v 101 (298)
T 3pls_A 22 VTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHVL 101 (298)
T ss_dssp EEEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEE
T ss_pred EEccCceeccCCCceEEEEEEecCCCceeeeeeeeccccccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCCCcEEE
Confidence 46667999999999999997532 2 379999987543 24457789999999999999999999999876655 999
Q ss_pred EeecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCCC
Q 045553 876 YNYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGTS 955 (1082)
Q Consensus 876 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~ 955 (1082)
|||+.+++|.+++... ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.....
T Consensus 102 ~e~~~~~~L~~~~~~~-~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~ 177 (298)
T 3pls_A 102 LPYMCHGDLLQFIRSP-QRNPTVKDLISFGLQVARGMEYLAEQ---KFVHRDLAARNCMLDESFTVKVADFGLARDILDR 177 (298)
T ss_dssp ECCCTTCBHHHHHHCT-TCCCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTCCEEECCTTSSCTTTTG
T ss_pred EecccCCCHHHHHhcc-ccCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCcceEEEcCCCcEEeCcCCCcccccCC
Confidence 9999999999999874 45789999999999999999999999 9999999999999999999999999999866432
Q ss_pred CC---ccccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCCCccc
Q 045553 956 ET---HATTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQGRPCEF 1032 (1082)
Q Consensus 956 ~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1032 (1082)
.. .......+++.|+|||.+.+..++.++||||+|+++|||++|+.|+..... ...... .. ..+..
T Consensus 178 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~~~~~~----~~~~~~---~~-~~~~~--- 246 (298)
T 3pls_A 178 EYYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHID----PFDLTH---FL-AQGRR--- 246 (298)
T ss_dssp GGGCSCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSC----GGGHHH---HH-HTTCC---
T ss_pred cccccccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCCCccCC----HHHHHH---Hh-hcCCC---
Confidence 21 223345678999999999999999999999999999999997766543211 112211 11 12111
Q ss_pred cccccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhhC
Q 045553 1033 FTAGLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQLKQIQ 1078 (1082)
Q Consensus 1033 ~d~~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L~~i~ 1078 (1082)
...+...+..+.+++.+|++.+|++|||+.|+++.|+++.
T Consensus 247 ------~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~l~~~~ 286 (298)
T 3pls_A 247 ------LPQPEYCPDSLYQVMQQCWEADPAVRPTFRVLVGEVEQIV 286 (298)
T ss_dssp ------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred ------CCCCccchHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 1123344568999999999999999999999999999874
No 177
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=100.00 E-value=4.7e-37 Score=362.15 Aligned_cols=249 Identities=22% Similarity=0.286 Sum_probs=199.0
Q ss_pred hcCccccceecccCceEEEEEEE-cCCeEEEEEEeecC---ccccHHHHHHHHHHHhccCCCceeeEeeeeccCCeEEEE
Q 045553 800 TAGFNVQNCIGSGGFGATYKAEI-IPGVVVAVKRLSVG---RFQGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFLI 875 (1082)
Q Consensus 800 ~~~~~~~~~lg~G~~g~Vy~a~~-~~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV 875 (1082)
.++|++.+.||+|+||.||+|.. .+|+.||||++... .......+.+|+++++.++||||+++++++.+.+..++|
T Consensus 147 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv 226 (446)
T 4ejn_A 147 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFV 226 (446)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEETTEEEEE
T ss_pred hHHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCCEEEEE
Confidence 35799999999999999999965 46899999999753 223446678899999999999999999999999999999
Q ss_pred EeecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhh-CCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCC
Q 045553 876 YNYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHD-ECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGT 954 (1082)
Q Consensus 876 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~-~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~ 954 (1082)
|||+++|+|.+++... ..+++..+..++.|++.||+|||+ . +|+||||||+||+++.++.+||+|||+++....
T Consensus 227 ~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~~---giiHrDlkp~NIll~~~~~~kl~DFG~a~~~~~ 301 (446)
T 4ejn_A 227 MEYANGGELFFHLSRE--RVFSEDRARFYGAEIVSALDYLHSEK---NVVYRDLKLENLMLDKDGHIKITDFGLCKEGIK 301 (446)
T ss_dssp ECCCSSCBHHHHHHHH--SCCCHHHHHHHHHHHHHHHHHHHHHT---CCCCCCCCGGGEEECSSSCEEECCCCCCCTTCC
T ss_pred EeeCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHhhcC---CEEECCCCHHHEEECCCCCEEEccCCCceeccC
Confidence 9999999999999874 468999999999999999999998 7 999999999999999999999999999986432
Q ss_pred CCCccccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCCCccccc
Q 045553 955 SETHATTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQGRPCEFFT 1034 (1082)
Q Consensus 955 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 1034 (1082)
.. .......||+.|+|||++.+..++.++|||||||++|||++|+.||... ...+..........
T Consensus 302 ~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~--------~~~~~~~~i~~~~~------ 366 (446)
T 4ejn_A 302 DG-ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQ--------DHEKLFELILMEEI------ 366 (446)
T ss_dssp ------CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCS--------SHHHHHHHHHHCCC------
T ss_pred CC-cccccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCCC--------CHHHHHHHHHhCCC------
Confidence 22 2334568999999999999999999999999999999999999999632 22333333332221
Q ss_pred cccCCCCChHHHHHHHHHHHHcccCCCCCCC-----CHHHHHHH
Q 045553 1035 AGLWDCGPHDDLIEMLNLAIMCTGESLSSRP-----SMRQVAQQ 1073 (1082)
Q Consensus 1035 ~~l~~~~~~~~~~~l~~li~~cl~~~p~~RP-----t~~ev~~~ 1073 (1082)
..+...+.++.+++.+|++.||++|| ++.|++++
T Consensus 367 -----~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~t~~ell~h 405 (446)
T 4ejn_A 367 -----RFPRTLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQH 405 (446)
T ss_dssp -----CCCTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTS
T ss_pred -----CCCccCCHHHHHHHHHHcccCHHHhCCCCCCCHHHHHhC
Confidence 12334456899999999999999999 99999863
No 178
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*
Probab=100.00 E-value=4.8e-37 Score=354.81 Aligned_cols=250 Identities=18% Similarity=0.321 Sum_probs=200.4
Q ss_pred cCccccceecccCceEEEEEEEcCCeEEEEEEeecCc--cccHHHHHHHHHHHhccC--CCceeeEeeeeccCCeEEEEE
Q 045553 801 AGFNVQNCIGSGGFGATYKAEIIPGVVVAVKRLSVGR--FQGVQQFAAEIRTLGRVQ--HPNLVTLIGYHVSEAEMFLIY 876 (1082)
Q Consensus 801 ~~~~~~~~lg~G~~g~Vy~a~~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~--h~niv~l~~~~~~~~~~~lV~ 876 (1082)
..|++.+.||+|+||.||+|...+++.||||++.... ....+.+.+|++++++++ ||||+++++++...+..++||
T Consensus 56 ~~y~~~~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~ 135 (390)
T 2zmd_A 56 RIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVM 135 (390)
T ss_dssp EEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred CceEEEEEEccCCCeEEEEEEcCCCCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCEEEEEE
Confidence 4599999999999999999988789999999997543 334577899999999997 599999999999999999999
Q ss_pred eecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCCCC
Q 045553 877 NYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGTSE 956 (1082)
Q Consensus 877 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~ 956 (1082)
|+ .+++|.+++... ..+++..+..++.||+.||+|||+. +|+||||||+||+++ ++.+||+|||+++.+....
T Consensus 136 E~-~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~aL~~lH~~---~ivHrDlkp~NIll~-~~~~kl~DFG~a~~~~~~~ 208 (390)
T 2zmd_A 136 EC-GNIDLNSWLKKK--KSIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDT 208 (390)
T ss_dssp EC-CSEEHHHHHHHC--SSCCHHHHHHHHHHHHHHHHHHHTT---TCCCCCCCGGGEEES-SSCEEECCCSSSCCC----
T ss_pred ec-CCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHEEEE-CCeEEEEecCccccccCCC
Confidence 94 588999999874 4789999999999999999999999 999999999999995 5799999999998765433
Q ss_pred Cc-cccCcccCCCcccchhccc-----------CCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHH
Q 045553 957 TH-ATTDVAGTFGYVAPEYAMT-----------CRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLL 1024 (1082)
Q Consensus 957 ~~-~~~~~~gt~~y~aPE~~~~-----------~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 1024 (1082)
.. ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||.... .....+....
T Consensus 209 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~-------~~~~~~~~~~ 281 (390)
T 2zmd_A 209 TSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQII-------NQISKLHAII 281 (390)
T ss_dssp -----CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTCC-------CHHHHHHHHH
T ss_pred ccccCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhh-------HHHHHHHHHh
Confidence 22 2345679999999999865 468999999999999999999999996321 1122222222
Q ss_pred hcCCCccccccccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 045553 1025 LQGRPCEFFTAGLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQ 1073 (1082)
Q Consensus 1025 ~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~ 1073 (1082)
... .....+.....++.+++.+||+.||++||++.||+++
T Consensus 282 ~~~---------~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~h 321 (390)
T 2zmd_A 282 DPN---------HEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAH 321 (390)
T ss_dssp CTT---------SCCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred Ccc---------ccCCCCccchHHHHHHHHHHcccChhhCCCHHHHhhC
Confidence 211 1111222334678999999999999999999999864
No 179
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}
Probab=100.00 E-value=2.2e-36 Score=334.53 Aligned_cols=252 Identities=26% Similarity=0.373 Sum_probs=200.9
Q ss_pred hcCccccceecccCceEEEEEEEc-CCeEEEEEEeecCc-cccHHHHHHHHHHHhccCCCceeeEeeeeccCCeEEEEEe
Q 045553 800 TAGFNVQNCIGSGGFGATYKAEII-PGVVVAVKRLSVGR-FQGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFLIYN 877 (1082)
Q Consensus 800 ~~~~~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~E 877 (1082)
.++|.+.+.||+|+||.||+|... ++..||+|++.... ....+.+.+|++++++++||||+++++++.+....++|||
T Consensus 21 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 100 (285)
T 3is5_A 21 DDLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVME 100 (285)
T ss_dssp HHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred hhheeecceeccCCCeEEEEEEEccCCceEEEEEeeccccchhHHHHHHHHHHHHhCCCchHHhHHHheecCCeEEEEEE
Confidence 357999999999999999999764 58999999987653 3456789999999999999999999999999999999999
Q ss_pred ecCCCCHHHHHhhC--CCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEE---cCCCcEEEeecccceec
Q 045553 878 YLPGGNLEKFIQDR--PRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILL---DNNLNAYLSDFGLARLL 952 (1082)
Q Consensus 878 ~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill---~~~~~~kl~DfGla~~~ 952 (1082)
|+++|+|.+++... ....+++..+..++.|++.||+|||+. +|+||||||+||++ +.++.+||+|||++..+
T Consensus 101 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a~~~ 177 (285)
T 3is5_A 101 TCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQ---HVVHKDLKPENILFQDTSPHSPIKIIDFGLAELF 177 (285)
T ss_dssp CCSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEESSSSTTCCEEECCCCCCCC-
T ss_pred eCCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHHhC---CEEECCCCHHHEEEecCCCCCCEEEEeeecceec
Confidence 99999999998653 245799999999999999999999999 99999999999999 45678999999999876
Q ss_pred CCCCCccccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCCCccc
Q 045553 953 GTSETHATTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQGRPCEF 1032 (1082)
Q Consensus 953 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1032 (1082)
.... ......|++.|+|||++. ..++.++||||+|+++|||++|+.||... ..................
T Consensus 178 ~~~~--~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~il~~ll~g~~pf~~~--------~~~~~~~~~~~~~~~~~~ 246 (285)
T 3is5_A 178 KSDE--HSTNAAGTALYMAPEVFK-RDVTFKCDIWSAGVVMYFLLTGCLPFTGT--------SLEEVQQKATYKEPNYAV 246 (285)
T ss_dssp -----------CTTGGGCCHHHHT-TCCCHHHHHHHHHHHHHHHHHSSCSSCCS--------SHHHHHHHHHHCCCCCCC
T ss_pred CCcc--cCcCcccccCcCChHHhc-cCCCcccCeehHHHHHHHHHhCCCCCCCC--------CHHHHHhhhccCCccccc
Confidence 4332 233457899999999886 56899999999999999999999999632 222222222222111110
Q ss_pred cccccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 045553 1033 FTAGLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQ 1073 (1082)
Q Consensus 1033 ~d~~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~ 1073 (1082)
. ....+.++.+++.+|++.||++||++.||+++
T Consensus 247 -~-------~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~h 279 (285)
T 3is5_A 247 -E-------CRPLTPQAVDLLKQMLTKDPERRPSAAQVLHH 279 (285)
T ss_dssp ----------CCCCHHHHHHHHHHTCSCTTTSCCHHHHHTS
T ss_pred -c-------cCcCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 0 01134578899999999999999999999863
No 180
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*
Probab=100.00 E-value=9.3e-37 Score=342.51 Aligned_cols=263 Identities=22% Similarity=0.389 Sum_probs=201.9
Q ss_pred HHHHhcCccccceecccCceEEEEEEEc----CCeEEEEEEeecCc--cccHHHHHHHHHHHhccCCCceeeEeeeeccC
Q 045553 796 VVRATAGFNVQNCIGSGGFGATYKAEII----PGVVVAVKRLSVGR--FQGVQQFAAEIRTLGRVQHPNLVTLIGYHVSE 869 (1082)
Q Consensus 796 ~~~~~~~~~~~~~lg~G~~g~Vy~a~~~----~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~ 869 (1082)
+.....+|.+.+.||+|+||.||+|... ++..||||++.... ....+.+.+|++++++++||||+++++++.+.
T Consensus 29 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~ 108 (313)
T 3brb_A 29 VVIDRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEM 108 (313)
T ss_dssp TBCCGGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEC-
T ss_pred cccCHHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeEEEeec
Confidence 3335677999999999999999999654 34589999987543 33456789999999999999999999998765
Q ss_pred C-----eEEEEEeecCCCCHHHHHhhC----CCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCc
Q 045553 870 A-----EMFLIYNYLPGGNLEKFIQDR----PRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLN 940 (1082)
Q Consensus 870 ~-----~~~lV~E~~~~gsL~~~l~~~----~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~ 940 (1082)
. ..++||||+++++|.+++... ....+++..++.++.|+++||+|||+. +|+||||||+||+++.++.
T Consensus 109 ~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dikp~NIli~~~~~ 185 (313)
T 3brb_A 109 SSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNR---NFLHRDLAARNCMLRDDMT 185 (313)
T ss_dssp ------CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHTT---TCCCCCCSGGGEEECTTSC
T ss_pred cccCCcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCcceEEEcCCCc
Confidence 4 359999999999999999542 245799999999999999999999999 9999999999999999999
Q ss_pred EEEeecccceecCCCCCc-cccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCccCCCCCccHHH
Q 045553 941 AYLSDFGLARLLGTSETH-ATTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELIS-DKKALDPSFCSFGNGFNIVA 1018 (1082)
Q Consensus 941 ~kl~DfGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~ellt-g~~p~~~~~~~~~~~~~~~~ 1018 (1082)
+||+|||+++........ ......+++.|+|||.+.+..++.++||||||+++|||++ |..||..... ..
T Consensus 186 ~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~-----~~--- 257 (313)
T 3brb_A 186 VCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQN-----HE--- 257 (313)
T ss_dssp EEECSCSCC----------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCG-----GG---
T ss_pred EEEeecCcceecccccccCcccccCCCccccCchhhcCCCccchhhhHHHHHHHHHHHhcCCCCCccCCH-----HH---
Confidence 999999999876443322 2233457889999999999999999999999999999999 8888864321 11
Q ss_pred HHHHHHhcCCCccccccccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhhCC
Q 045553 1019 WASMLLLQGRPCEFFTAGLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQLKQIQP 1079 (1082)
Q Consensus 1019 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L~~i~~ 1079 (1082)
...... .+... ..+...+..+.+++.+|++.+|++||++.|++++|+++..
T Consensus 258 ~~~~~~-~~~~~---------~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~l~~ 308 (313)
T 3brb_A 258 MYDYLL-HGHRL---------KQPEDCLDELYEIMYSCWRTDPLDRPTFSVLRLQLEKLLE 308 (313)
T ss_dssp HHHHHH-TTCCC---------CCBTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHHHHH-cCCCC---------CCCccccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence 112222 11111 1223445689999999999999999999999999998753
No 181
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Probab=100.00 E-value=8.3e-37 Score=349.36 Aligned_cols=246 Identities=26% Similarity=0.315 Sum_probs=196.5
Q ss_pred cCccccceecccCceEEEEEEEc-CCeEEEEEEeecCcc---ccHHHHHHHHHH-HhccCCCceeeEeeeeccCCeEEEE
Q 045553 801 AGFNVQNCIGSGGFGATYKAEII-PGVVVAVKRLSVGRF---QGVQQFAAEIRT-LGRVQHPNLVTLIGYHVSEAEMFLI 875 (1082)
Q Consensus 801 ~~~~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~~---~~~~~~~~e~~~-l~~l~h~niv~l~~~~~~~~~~~lV 875 (1082)
++|++.+.||+|+||.||+|+.. +++.||||++..... .....+.+|..+ ++.++||||+++++++.+.+..|+|
T Consensus 38 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~~~~lv 117 (373)
T 2r5t_A 38 SDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFV 117 (373)
T ss_dssp GGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEECSSEEEEE
T ss_pred hheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCCEEEEE
Confidence 56999999999999999999765 578999999976532 233456667766 5778999999999999999999999
Q ss_pred EeecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCCC
Q 045553 876 YNYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGTS 955 (1082)
Q Consensus 876 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~ 955 (1082)
|||+++|+|.+++... ..+++..+..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+++.....
T Consensus 118 ~E~~~gg~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~ikL~DFG~a~~~~~~ 192 (373)
T 2r5t_A 118 LDYINGGELFYHLQRE--RCFLEPRARFYAAEIASALGYLHSL---NIVYRDLKPENILLDSQGHIVLTDFGLCKENIEH 192 (373)
T ss_dssp EECCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCCBCGGGBCC
T ss_pred EeCCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEECCCCCEEEeeCccccccccC
Confidence 9999999999999873 4689999999999999999999999 9999999999999999999999999999864322
Q ss_pred CCccccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCCCcccccc
Q 045553 956 ETHATTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQGRPCEFFTA 1035 (1082)
Q Consensus 956 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 1035 (1082)
. ......+||+.|+|||++.+..++.++|||||||++|||++|+.||... +..+....+.... .
T Consensus 193 ~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~--------~~~~~~~~i~~~~-~------ 256 (373)
T 2r5t_A 193 N-STTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSR--------NTAEMYDNILNKP-L------ 256 (373)
T ss_dssp C-CCCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCS--------BHHHHHHHHHHSC-C------
T ss_pred C-CccccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCCC--------CHHHHHHHHHhcc-c------
Confidence 2 2344568999999999999999999999999999999999999999632 2233333333221 1
Q ss_pred ccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHH
Q 045553 1036 GLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVA 1071 (1082)
Q Consensus 1036 ~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~ 1071 (1082)
..+...+..+.+++.+|++.||++||++.+.+
T Consensus 257 ----~~~~~~~~~~~~li~~lL~~dp~~R~~~~~~~ 288 (373)
T 2r5t_A 257 ----QLKPNITNSARHLLEGLLQKDRTKRLGAKDDF 288 (373)
T ss_dssp ----CCCSSSCHHHHHHHHHHTCSSGGGSTTTTTTH
T ss_pred ----CCCCCCCHHHHHHHHHHcccCHHhCCCCCCCH
Confidence 12233456789999999999999999985433
No 182
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*
Probab=100.00 E-value=1.1e-36 Score=338.06 Aligned_cols=260 Identities=25% Similarity=0.403 Sum_probs=203.0
Q ss_pred hcCccccceecccCceEEEEEEEc--CC--eEEEEEEeecC---ccccHHHHHHHHHHHhccCCCceeeEeeeeccCCeE
Q 045553 800 TAGFNVQNCIGSGGFGATYKAEII--PG--VVVAVKRLSVG---RFQGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEM 872 (1082)
Q Consensus 800 ~~~~~~~~~lg~G~~g~Vy~a~~~--~~--~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~ 872 (1082)
..+|++.+.||+|+||.||+|++. ++ ..||||++... .....+.+.+|++++++++||||+++++++.... .
T Consensus 17 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~ 95 (291)
T 1u46_A 17 EKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPP-M 95 (291)
T ss_dssp GGGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS-C
T ss_pred hhHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEccCC-c
Confidence 357999999999999999999753 23 36899998654 2344678899999999999999999999998765 8
Q ss_pred EEEEeecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceec
Q 045553 873 FLIYNYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLL 952 (1082)
Q Consensus 873 ~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~ 952 (1082)
++||||+++++|.+++... ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++...
T Consensus 96 ~~v~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~ 171 (291)
T 1u46_A 96 KMVTELAPLGSLLDRLRKH-QGHFLLGTLSRYAVQVAEGMGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRAL 171 (291)
T ss_dssp EEEEECCTTCBHHHHHHHH-GGGSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEEEETTEEEECCCTTCEEC
T ss_pred eeeEecccCCCHHHHHHhc-cCCcCHHHHHHHHHHHHHHHHHHHhC---CcccCCCchheEEEcCCCCEEEccccccccc
Confidence 8999999999999999864 34689999999999999999999999 9999999999999999999999999999887
Q ss_pred CCCCCc--cccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCccCCCCCccHHHHHHHHHhcCCC
Q 045553 953 GTSETH--ATTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELIS-DKKALDPSFCSFGNGFNIVAWASMLLLQGRP 1029 (1082)
Q Consensus 953 ~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1029 (1082)
...... ......++..|+|||++.+..++.++||||||+++|||++ |+.||... ...+........+..
T Consensus 172 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~--------~~~~~~~~~~~~~~~ 243 (291)
T 1u46_A 172 PQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGL--------NGSQILHKIDKEGER 243 (291)
T ss_dssp CC-CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTC--------CHHHHHHHHHTSCCC
T ss_pred cccccchhhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCcccC--------CHHHHHHHHHccCCC
Confidence 544332 2233467889999999999889999999999999999999 99998632 223333333332211
Q ss_pred ccccccccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhhCCCC
Q 045553 1030 CEFFTAGLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQLKQIQPPA 1081 (1082)
Q Consensus 1030 ~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L~~i~~~~ 1081 (1082)
. ..+...+..+.+++.+|++.+|++||++.++++.|+++++..
T Consensus 244 ~---------~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~ 286 (291)
T 1u46_A 244 L---------PRPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEAQPTD 286 (291)
T ss_dssp C---------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC---
T ss_pred C---------CCCcCcCHHHHHHHHHHccCCcccCcCHHHHHHHHHHhCccc
Confidence 1 122345578999999999999999999999999999987653
No 183
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}
Probab=100.00 E-value=1.5e-36 Score=334.61 Aligned_cols=250 Identities=25% Similarity=0.418 Sum_probs=186.9
Q ss_pred hcCccccceecccCceEEEEEEE-cCCeEEEEEEeecCc---cccHHHHHHHHHHHhccCCCceeeEeeeeccCCeEEEE
Q 045553 800 TAGFNVQNCIGSGGFGATYKAEI-IPGVVVAVKRLSVGR---FQGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFLI 875 (1082)
Q Consensus 800 ~~~~~~~~~lg~G~~g~Vy~a~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV 875 (1082)
.++|++.+.||+|+||.||+|+. .+|+.||||++.... ....+.+.+|++++++++||||+++++++.+.+..++|
T Consensus 10 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 89 (278)
T 3cok_A 10 IEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVYLV 89 (278)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSSEEEEE
T ss_pred cccceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCCeEEEE
Confidence 45799999999999999999976 468999999986432 22346789999999999999999999999999999999
Q ss_pred EeecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCCC
Q 045553 876 YNYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGTS 955 (1082)
Q Consensus 876 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~ 955 (1082)
|||+++++|.+++... ...+++..++.++.|+++||+|||+. +|+||||||+||+++.++.+||+|||.+......
T Consensus 90 ~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~ 165 (278)
T 3cok_A 90 LEMCHNGEMNRYLKNR-VKPFSENEARHFMHQIITGMLYLHSH---GILHRDLTLSNLLLTRNMNIKIADFGLATQLKMP 165 (278)
T ss_dssp EECCTTEEHHHHHHTC-SSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSSCCGGGEEECTTCCEEECCCTTCEECC--
T ss_pred EecCCCCcHHHHHhhc-cCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCCEEEEeecceeeccCC
Confidence 9999999999999864 35789999999999999999999999 9999999999999999999999999999876533
Q ss_pred CCccccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCCCcccccc
Q 045553 956 ETHATTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQGRPCEFFTA 1035 (1082)
Q Consensus 956 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 1035 (1082)
.. ......|++.|+|||.+.+..++.++||||+|+++|||++|+.||...... . ... .....
T Consensus 166 ~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~-----~---~~~---------~~~~~ 227 (278)
T 3cok_A 166 HE-KHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVK-----N---TLN---------KVVLA 227 (278)
T ss_dssp ---------------------------CTHHHHHHHHHHHHHHSSCSSCCCSCC----------------------CCSS
T ss_pred CC-cceeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCChhHH-----H---HHH---------HHhhc
Confidence 22 223456899999999999989999999999999999999999999743211 0 000 00000
Q ss_pred ccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 045553 1036 GLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQ 1073 (1082)
Q Consensus 1036 ~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~ 1073 (1082)
.. ..+...+.++.+++.+|++.||++||++.|++++
T Consensus 228 ~~--~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h 263 (278)
T 3cok_A 228 DY--EMPSFLSIEAKDLIHQLLRRNPADRLSLSSVLDH 263 (278)
T ss_dssp CC--CCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred cc--CCccccCHHHHHHHHHHcccCHhhCCCHHHHhcC
Confidence 00 1233445688999999999999999999999863
No 184
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}
Probab=100.00 E-value=9.7e-37 Score=348.20 Aligned_cols=262 Identities=16% Similarity=0.248 Sum_probs=208.1
Q ss_pred hcCccccceecccCceEEEEEEEcC---------CeEEEEEEeecCccccHHHHHHHHHHHhccCCCceee---------
Q 045553 800 TAGFNVQNCIGSGGFGATYKAEIIP---------GVVVAVKRLSVGRFQGVQQFAAEIRTLGRVQHPNLVT--------- 861 (1082)
Q Consensus 800 ~~~~~~~~~lg~G~~g~Vy~a~~~~---------~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~--------- 861 (1082)
.++|++.+.||+|+||.||+|+... ++.||||++... +.+.+|++++++++||||++
T Consensus 41 ~~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~-----~~~~~E~~~l~~l~h~niv~~~~~~~~~~ 115 (352)
T 2jii_A 41 GRQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD-----GRLFNEQNFFQRAAKPLQVNKWKKLYSTP 115 (352)
T ss_dssp SCEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT-----STHHHHHHHHHHHCCHHHHHHHHHHTTCT
T ss_pred CCeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc-----chHHHHHHHHHHhcccchhhhhhhhccCC
Confidence 3579999999999999999997653 789999998754 35789999999999999987
Q ss_pred ------Eeeeecc-CCeEEEEEeecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEE
Q 045553 862 ------LIGYHVS-EAEMFLIYNYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNIL 934 (1082)
Q Consensus 862 ------l~~~~~~-~~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nil 934 (1082)
+++++.. ....++||||+ +++|.+++.......+++..+..++.|++.||+|||+. +|+||||||+||+
T Consensus 116 ~~~i~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dikp~NIl 191 (352)
T 2jii_A 116 LLAIPTCMGFGVHQDKYRFLVLPSL-GRSLQSALDVSPKHVLSERSVLQVACRLLDALEFLHEN---EYVHGNVTAENIF 191 (352)
T ss_dssp TCSCCCCCEEEEETTTEEEEEEECC-CEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCCGGGEE
T ss_pred ccCccchhhccccCCcEEEEEecCC-CcCHHHHHHhCCcCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCHHHEE
Confidence 5566654 67889999999 99999999976456799999999999999999999999 9999999999999
Q ss_pred EcCCC--cEEEeecccceecCCCCCc------cccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHhCCCCCCCC
Q 045553 935 LDNNL--NAYLSDFGLARLLGTSETH------ATTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELISDKKALDPS 1006 (1082)
Q Consensus 935 l~~~~--~~kl~DfGla~~~~~~~~~------~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~elltg~~p~~~~ 1006 (1082)
++.++ .+||+|||+++.+...... ......||+.|+|||++.+..++.++||||||+++|||++|+.||...
T Consensus 192 ~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~ 271 (352)
T 2jii_A 192 VDPEDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCMLKWLYGFLPWTNC 271 (352)
T ss_dssp EETTEEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGG
T ss_pred EcCCCCceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCcccC
Confidence 99998 9999999999876533221 223457999999999999999999999999999999999999999753
Q ss_pred ccCCCCCccHHHHHHHHHhcCCCccccccccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhhC
Q 045553 1007 FCSFGNGFNIVAWASMLLLQGRPCEFFTAGLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQLKQIQ 1078 (1082)
Q Consensus 1007 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L~~i~ 1078 (1082)
... ............. ......+... .....+.++.+++.+|++.||++||++.||++.|+++.
T Consensus 272 ~~~---~~~~~~~~~~~~~--~~~~~~~~~~---~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~ 335 (352)
T 2jii_A 272 LPN---TEDIMKQKQKFVD--KPGPFVGPCG---HWIRPSETLQKYLKVVMALTYEEKPPYAMLRNNLEALL 335 (352)
T ss_dssp TTC---HHHHHHHHHHHHH--SCCCEECTTS---CEECCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHH
T ss_pred CcC---HHHHHHHHHhccC--Chhhhhhhcc---ccCCCcHHHHHHHHHHHhCChhhCCCHHHHHHHHHHHH
Confidence 211 1222222222211 1122211111 01123468999999999999999999999999998874
No 185
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*
Probab=100.00 E-value=1.1e-36 Score=343.96 Aligned_cols=257 Identities=29% Similarity=0.412 Sum_probs=206.7
Q ss_pred hcCccccceecccCceEEEEEEE-cCCeE--EEEEEeecC-ccccHHHHHHHHHHHhcc-CCCceeeEeeeeccCCeEEE
Q 045553 800 TAGFNVQNCIGSGGFGATYKAEI-IPGVV--VAVKRLSVG-RFQGVQQFAAEIRTLGRV-QHPNLVTLIGYHVSEAEMFL 874 (1082)
Q Consensus 800 ~~~~~~~~~lg~G~~g~Vy~a~~-~~~~~--vavK~~~~~-~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~l 874 (1082)
.++|++.+.||+|+||.||+|+. .++.. ||+|++... .....+.+.+|+++++++ +||||+++++++.+.+..++
T Consensus 24 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~l 103 (327)
T 1fvr_A 24 WNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYL 103 (327)
T ss_dssp GGGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEE
T ss_pred HHHccceeeeecCCCceEEEEEEccCCcccceeeeeeccccchHHHHHHHHHHHHHHhccCCCchhhhceeeeeCCceEE
Confidence 35799999999999999999964 45664 499988753 233456789999999999 89999999999999999999
Q ss_pred EEeecCCCCHHHHHhhCC--------------CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCc
Q 045553 875 IYNYLPGGNLEKFIQDRP--------------RRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLN 940 (1082)
Q Consensus 875 V~E~~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~ 940 (1082)
||||+++++|.+++.... ...+++..++.++.|++.||+|||+. +|+||||||+||+++.++.
T Consensus 104 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~~~~~ 180 (327)
T 1fvr_A 104 AIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QFIHRDLAARNILVGENYV 180 (327)
T ss_dssp EECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECGGGC
T ss_pred EEecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCccceEEEcCCCe
Confidence 999999999999998643 24799999999999999999999999 9999999999999999999
Q ss_pred EEEeecccceecCCCCCccccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCccCCCCCccHHHH
Q 045553 941 AYLSDFGLARLLGTSETHATTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELIS-DKKALDPSFCSFGNGFNIVAW 1019 (1082)
Q Consensus 941 ~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~ellt-g~~p~~~~~~~~~~~~~~~~~ 1019 (1082)
+||+|||+++..... .......+++.|+|||++.+..++.++||||||+++|||++ |+.||... ...+.
T Consensus 181 ~kL~Dfg~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~--------~~~~~ 250 (327)
T 1fvr_A 181 AKIADFGLSRGQEVY--VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGM--------TCAEL 250 (327)
T ss_dssp EEECCTTCEESSCEE--CCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTC--------CHHHH
T ss_pred EEEcccCcCcccccc--ccccCCCCCccccChhhhccccCCchhcchHHHHHHHHHHcCCCCCCCCC--------cHHHH
Confidence 999999999753221 12223457889999999999899999999999999999998 99999632 22222
Q ss_pred HHHHHhcCCCccccccccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhhCC
Q 045553 1020 ASMLLLQGRPCEFFTAGLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQLKQIQP 1079 (1082)
Q Consensus 1020 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L~~i~~ 1079 (1082)
.... ..+. ....+...+..+.+++.+|++.+|++||++.|+++.|+++..
T Consensus 251 ~~~~-~~~~---------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~ 300 (327)
T 1fvr_A 251 YEKL-PQGY---------RLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLE 300 (327)
T ss_dssp HHHG-GGTC---------CCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHHh-hcCC---------CCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHH
Confidence 2221 1211 112233455789999999999999999999999999987643
No 186
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Probab=100.00 E-value=1.4e-36 Score=344.27 Aligned_cols=253 Identities=22% Similarity=0.274 Sum_probs=205.1
Q ss_pred HhcCccccceecccCceEEEEEEEc-CCeEEEEEEeecCccccHHHHHHHHHHHhcc-CCCceeeEeeeeccCCeEEEEE
Q 045553 799 ATAGFNVQNCIGSGGFGATYKAEII-PGVVVAVKRLSVGRFQGVQQFAAEIRTLGRV-QHPNLVTLIGYHVSEAEMFLIY 876 (1082)
Q Consensus 799 ~~~~~~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lV~ 876 (1082)
..++|++.+.||+|+||.||+|... +++.||||++...... ..+|++++.++ +||||+++++++.+....|+||
T Consensus 20 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~----~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ 95 (342)
T 2qr7_A 20 FTDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKRD----PTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVT 95 (342)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTCC----CHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEE
T ss_pred ccccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccCC----hHHHHHHHHHhcCCCCcCeEEEEEEcCCEEEEEE
Confidence 4567999999999999999999765 6899999999765433 35678888877 7999999999999999999999
Q ss_pred eecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCC----CcEEEeecccceec
Q 045553 877 NYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNN----LNAYLSDFGLARLL 952 (1082)
Q Consensus 877 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~----~~~kl~DfGla~~~ 952 (1082)
||+++|+|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+||++..+ +.+||+|||+++..
T Consensus 96 E~~~gg~L~~~i~~~--~~~~~~~~~~~~~qi~~al~~lH~~---givHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a~~~ 170 (342)
T 2qr7_A 96 ELMKGGELLDKILRQ--KFFSEREASAVLFTITKTVEYLHAQ---GVVHRDLKPSNILYVDESGNPESIRICDFGFAKQL 170 (342)
T ss_dssp CCCCSCBHHHHHHTC--TTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESSSSCSGGGEEECCCTTCEEC
T ss_pred eCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC---CcEeccCCHHHEEEecCCCCcCeEEEEECCCcccC
Confidence 999999999999864 4699999999999999999999999 99999999999998533 35999999999876
Q ss_pred CCCCCccccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCCCccc
Q 045553 953 GTSETHATTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQGRPCEF 1032 (1082)
Q Consensus 953 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1032 (1082)
..... ......||+.|+|||++.+..++.++||||+||++|||++|+.||.... .....+....... +...
T Consensus 171 ~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~-----~~~~~~~~~~i~~-~~~~-- 241 (342)
T 2qr7_A 171 RAENG-LLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGP-----DDTPEEILARIGS-GKFS-- 241 (342)
T ss_dssp BCTTC-CBCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCSST-----TSCHHHHHHHHHH-CCCC--
T ss_pred cCCCC-ceeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCCCC-----cCCHHHHHHHHcc-CCcc--
Confidence 54332 2344678999999999998889999999999999999999999997421 2233333333322 2211
Q ss_pred cccccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 045553 1033 FTAGLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQ 1073 (1082)
Q Consensus 1033 ~d~~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~ 1073 (1082)
.........+.++.+++.+|++.||++||++.|++++
T Consensus 242 ----~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~~il~h 278 (342)
T 2qr7_A 242 ----LSGGYWNSVSDTAKDLVSKMLHVDPHQRLTAALVLRH 278 (342)
T ss_dssp ----CCSTTTTTSCHHHHHHHHHHTCSSTTTSCCHHHHTTS
T ss_pred ----cCccccccCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 1111223445689999999999999999999998764
No 187
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=8e-37 Score=348.82 Aligned_cols=255 Identities=24% Similarity=0.335 Sum_probs=208.9
Q ss_pred hcCccccceecccCceEEEEEEE----cCCeEEEEEEeecCc----cccHHHHHHHHHHHhcc-CCCceeeEeeeeccCC
Q 045553 800 TAGFNVQNCIGSGGFGATYKAEI----IPGVVVAVKRLSVGR----FQGVQQFAAEIRTLGRV-QHPNLVTLIGYHVSEA 870 (1082)
Q Consensus 800 ~~~~~~~~~lg~G~~g~Vy~a~~----~~~~~vavK~~~~~~----~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~ 870 (1082)
..+|++.+.||+|+||.||+|+. .+++.||||++.... ....+.+.+|+++++++ +||||+++++++....
T Consensus 53 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~ 132 (355)
T 1vzo_A 53 IENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTET 132 (355)
T ss_dssp GGGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETT
T ss_pred ccceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeCc
Confidence 35799999999999999999977 368999999986432 12345577899999999 6999999999999999
Q ss_pred eEEEEEeecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccce
Q 045553 871 EMFLIYNYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLAR 950 (1082)
Q Consensus 871 ~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~ 950 (1082)
..++||||+++++|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++
T Consensus 133 ~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~DfG~a~ 207 (355)
T 1vzo_A 133 KLHLILDYINGGELFTHLSQR--ERFTEHEVQIYVGEIVLALEHLHKL---GIIYRDIKLENILLDSNGHVVLTDFGLSK 207 (355)
T ss_dssp EEEEEECCCCSCBHHHHHHHH--SCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEESCSSEEE
T ss_pred eEEEEeecCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCcEEEeeCCCCe
Confidence 999999999999999999874 4689999999999999999999999 99999999999999999999999999998
Q ss_pred ecCCCCCccccCcccCCCcccchhccc--CCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCC
Q 045553 951 LLGTSETHATTDVAGTFGYVAPEYAMT--CRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQGR 1028 (1082)
Q Consensus 951 ~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 1028 (1082)
.+............||+.|+|||++.+ ..++.++|||||||++|||++|+.||..... ...............
T Consensus 208 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~----~~~~~~~~~~~~~~~- 282 (355)
T 1vzo_A 208 EFVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGE----KNSQAEISRRILKSE- 282 (355)
T ss_dssp ECCGGGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTS----CCCHHHHHHHHHHCC-
T ss_pred ecccCCCCcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccCCc----cchHHHHHHHHhccC-
Confidence 775444444455679999999999986 4578999999999999999999999974321 223333333332221
Q ss_pred CccccccccCCCCChHHHHHHHHHHHHcccCCCCCCC-----CHHHHHHHH
Q 045553 1029 PCEFFTAGLWDCGPHDDLIEMLNLAIMCTGESLSSRP-----SMRQVAQQL 1074 (1082)
Q Consensus 1029 ~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~p~~RP-----t~~ev~~~L 1074 (1082)
...+...+..+.+++.+|++.||++|| ++.|++++.
T Consensus 283 ----------~~~~~~~~~~~~~li~~~L~~dP~~R~~~~~~s~~ell~h~ 323 (355)
T 1vzo_A 283 ----------PPYPQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHL 323 (355)
T ss_dssp ----------CCCCTTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTSG
T ss_pred ----------CCCCcccCHHHHHHHHHHhhhCHHHhcCCCCCCHHHHHcCc
Confidence 112334556889999999999999999 999998754
No 188
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A
Probab=100.00 E-value=1e-36 Score=343.44 Aligned_cols=250 Identities=24% Similarity=0.290 Sum_probs=182.9
Q ss_pred ceecccCceEEEEEEEc-CCeEEEEEEeecCccccHHHHHHHHHHHhccC-CCceeeEeeeeccCCeEEEEEeecCCCCH
Q 045553 807 NCIGSGGFGATYKAEII-PGVVVAVKRLSVGRFQGVQQFAAEIRTLGRVQ-HPNLVTLIGYHVSEAEMFLIYNYLPGGNL 884 (1082)
Q Consensus 807 ~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~~~lV~E~~~~gsL 884 (1082)
+.||+|+||.||+|... +++.||||++... ....+.+|+.+++.+. ||||+++++++.+....++||||+++|+|
T Consensus 17 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~~~L 93 (325)
T 3kn6_A 17 KPLGEGSFSICRKCVHKKSNQAFAVKIISKR---MEANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNGGEL 93 (325)
T ss_dssp CCSEEETTEEEEEEEETTTCCEEEEEEEEGG---GHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCCSCBH
T ss_pred CccccCCCeEEEEEEECCCCCEEEEEEEChh---hhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCEEEEEEEccCCCcH
Confidence 78999999999999765 5899999998643 3467789999999997 99999999999999999999999999999
Q ss_pred HHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCC---cEEEeecccceecCCCCCcccc
Q 045553 885 EKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNL---NAYLSDFGLARLLGTSETHATT 961 (1082)
Q Consensus 885 ~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~---~~kl~DfGla~~~~~~~~~~~~ 961 (1082)
.+++... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++ .+||+|||+++....... ...
T Consensus 94 ~~~l~~~--~~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~-~~~ 167 (325)
T 3kn6_A 94 FERIKKK--KHFSETEASYIMRKLVSAVSHMHDV---GVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQ-PLK 167 (325)
T ss_dssp HHHHHHC--SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEC----CEEEECCCTTCEECCC-------
T ss_pred HHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CCeecCCCHHHEEEecCCCcccEEEeccccceecCCCCC-ccc
Confidence 9999874 5699999999999999999999999 999999999999997765 899999999987654322 234
Q ss_pred CcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCCCccccccccCCCC
Q 045553 962 DVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQGRPCEFFTAGLWDCG 1041 (1082)
Q Consensus 962 ~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 1041 (1082)
...||+.|+|||++.+..++.++||||+|+++|||++|+.||....... ......+.... +..+... .....
T Consensus 168 ~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~-~~~~~~~~~~~-i~~~~~~------~~~~~ 239 (325)
T 3kn6_A 168 TPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSL-TCTSAVEIMKK-IKKGDFS------FEGEA 239 (325)
T ss_dssp ----------------CCCCHHHHHHHHHHHHHHHHHSSCTTC--------CCCHHHHHHH-HTTTCCC------CCSHH
T ss_pred ccCCCcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCcccc-ccccHHHHHHH-HHcCCCC------CCccc
Confidence 4578999999999999999999999999999999999999997533211 11222222222 2222111 00000
Q ss_pred ChHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 045553 1042 PHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQ 1073 (1082)
Q Consensus 1042 ~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~ 1073 (1082)
....+.++.+++.+|++.||++||++.|++++
T Consensus 240 ~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~h 271 (325)
T 3kn6_A 240 WKNVSQEAKDLIQGLLTVDPNKRLKMSGLRYN 271 (325)
T ss_dssp HHTSCHHHHHHHHHHHCCCTTTCCCTTTSTTC
T ss_pred ccCCCHHHHHHHHHHCCCChhHCCCHHHHhcC
Confidence 12345689999999999999999999998753
No 189
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=100.00 E-value=1.6e-35 Score=351.40 Aligned_cols=213 Identities=23% Similarity=0.291 Sum_probs=126.9
Q ss_pred cCCCCCCEEeCcCCCCCCCCCccccCCCCCCeEEccCcccccccCccccCCCCCcEEEcccCcccccCCccccccccccc
Q 045553 131 GQLSLLEILDLSFNSFHGPIPPTLQNCSSLRLINLSGNQFNGTIPAFFGQSPGFQVVSLSFNLLSGSVPEEFGDNCVSLE 210 (1082)
Q Consensus 131 ~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~ 210 (1082)
..+++|+.|++++|.++ .+|. +..+++|++|+|++|++++..+ +..+++|++|++++|++.+. +. + ..+++|+
T Consensus 43 ~~l~~l~~L~l~~~~i~-~l~~-~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~-~~-~-~~l~~L~ 115 (466)
T 1o6v_A 43 TDLDQVTTLQADRLGIK-SIDG-VEYLNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIADI-TP-L-ANLTNLT 115 (466)
T ss_dssp HHHHTCCEEECCSSCCC-CCTT-GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCC-GG-G-TTCTTCC
T ss_pred hHhccccEEecCCCCCc-cCcc-hhhhcCCCEEECCCCccCCchh--hhccccCCEEECCCCccccC-hh-h-cCCCCCC
Confidence 34678899999999888 4664 7888999999999998886544 78888888888888887733 32 2 3466666
Q ss_pred EEEcccCccCCCCCccccCCCCccEEEccCCcCCCCcCccccCCCCCCEEeCCCCcCcccCCccccCCCCCcEEEecccc
Q 045553 211 HILLAANSLTGSIPPSLGNCTELRSLLLSSNMLQGDIPSSFGQLVNLEVLDLSRNFLSGIVPSELGMCKQLKVLVLRNDY 290 (1082)
Q Consensus 211 ~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~n~ 290 (1082)
+|++++|++++. +. +.++++|++|++++|.+++ ++ .+..+++|++|+++ |.+.+.. .+..+++|++|++
T Consensus 116 ~L~L~~n~l~~~-~~-~~~l~~L~~L~l~~n~l~~-~~-~~~~l~~L~~L~l~-~~~~~~~--~~~~l~~L~~L~l---- 184 (466)
T 1o6v_A 116 GLTLFNNQITDI-DP-LKNLTNLNRLELSSNTISD-IS-ALSGLTSLQQLSFG-NQVTDLK--PLANLTTLERLDI---- 184 (466)
T ss_dssp EEECCSSCCCCC-GG-GTTCTTCSEEEEEEEEECC-CG-GGTTCTTCSEEEEE-ESCCCCG--GGTTCTTCCEEEC----
T ss_pred EEECCCCCCCCC-hH-HcCCCCCCEEECCCCccCC-Ch-hhccCCcccEeecC-CcccCch--hhccCCCCCEEEC----
Confidence 666666666643 22 5566666666666666653 22 35555666666654 3333221 1444455555554
Q ss_pred CCcccccCCCCCCcccccCCCcccccCCCCCccccCCCCCcEEEcCCCcccCCCCcccccccCCCeEEcCCccccCCCCc
Q 045553 291 GPLYSREHGDLPIQPVVDGGEDYNFFDGGLPDSITRLPNLRVFWAPNLNLEGIFPQNWELCSKLEMLNLAHNFFTGQIPA 370 (1082)
Q Consensus 291 ~~~~~~~~~~l~~~~~~~~~~~~n~~~~~~p~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~N~i~~~~p~ 370 (1082)
++|.+.+. ..+..+++|++|++++|++++..|
T Consensus 185 ---------------------------------------------~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~- 216 (466)
T 1o6v_A 185 ---------------------------------------------SSNKVSDI--SVLAKLTNLESLIATNNQISDITP- 216 (466)
T ss_dssp ---------------------------------------------CSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG-
T ss_pred ---------------------------------------------cCCcCCCC--hhhccCCCCCEEEecCCccccccc-
Confidence 44444443 234555566666666666654333
Q ss_pred cccCCCCCCEEecCCCcCcccCCCCcccCcccEEEecCCcc
Q 045553 371 SLGNCKSLYFLDLSSNNLTGLLPEEVSVPCMAVFNVSQNLL 411 (1082)
Q Consensus 371 ~~~~l~~L~~L~Ls~N~l~~~~p~~~~l~~L~~L~l~~N~l 411 (1082)
+..+++|+.|++++|++++. +....+++|+.|++++|.+
T Consensus 217 -~~~l~~L~~L~l~~n~l~~~-~~l~~l~~L~~L~l~~n~l 255 (466)
T 1o6v_A 217 -LGILTNLDELSLNGNQLKDI-GTLASLTNLTDLDLANNQI 255 (466)
T ss_dssp -GGGCTTCCEEECCSSCCCCC-GGGGGCTTCSEEECCSSCC
T ss_pred -ccccCCCCEEECCCCCcccc-hhhhcCCCCCEEECCCCcc
Confidence 45556666666666665543 2222345555555555544
No 190
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Probab=100.00 E-value=9e-37 Score=345.28 Aligned_cols=243 Identities=23% Similarity=0.331 Sum_probs=204.9
Q ss_pred HhcCccccceecccCceEEEEEEE-cCCeEEEEEEeecCcc--------ccHHHHHHHHHHHhccCCCceeeEeeeeccC
Q 045553 799 ATAGFNVQNCIGSGGFGATYKAEI-IPGVVVAVKRLSVGRF--------QGVQQFAAEIRTLGRVQHPNLVTLIGYHVSE 869 (1082)
Q Consensus 799 ~~~~~~~~~~lg~G~~g~Vy~a~~-~~~~~vavK~~~~~~~--------~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~ 869 (1082)
..++|++.+.||+|+||.||+|.. .+++.||||++..... ...+.+.+|++++++++||||+++++++.+.
T Consensus 22 ~~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~ 101 (335)
T 3dls_A 22 YSQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFENQ 101 (335)
T ss_dssp HHHHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEECS
T ss_pred cccceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEeeC
Confidence 456799999999999999999964 5689999999976532 1234577899999999999999999999999
Q ss_pred CeEEEEEeecCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeeccc
Q 045553 870 AEMFLIYNYLPGG-NLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGL 948 (1082)
Q Consensus 870 ~~~~lV~E~~~~g-sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGl 948 (1082)
+..++||||+.+| +|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 102 ~~~~lv~e~~~~g~~l~~~~~~~--~~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~Dfg~ 176 (335)
T 3dls_A 102 GFFQLVMEKHGSGLDLFAFIDRH--PRLDEPLASYIFRQLVSAVGYLRLK---DIIHRDIKDENIVIAEDFTIKLIDFGS 176 (335)
T ss_dssp SEEEEEEECCTTSCBHHHHHHTC--CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCCTT
T ss_pred CEEEEEEEeCCCCccHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhC---CeEEeccCHHHEEEcCCCcEEEeeccc
Confidence 9999999999777 999999874 4699999999999999999999999 999999999999999999999999999
Q ss_pred ceecCCCCCccccCcccCCCcccchhcccCCC-CchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcC
Q 045553 949 ARLLGTSETHATTDVAGTFGYVAPEYAMTCRV-SDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQG 1027 (1082)
Q Consensus 949 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 1027 (1082)
++....... .....||+.|+|||++.+..+ +.++||||||+++|||++|+.||......
T Consensus 177 a~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~------------------ 236 (335)
T 3dls_A 177 AAYLERGKL--FYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEET------------------ 236 (335)
T ss_dssp CEECCTTCC--BCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSSGGGG------------------
T ss_pred ceECCCCCc--eeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhhHHHH------------------
Confidence 987754332 234579999999999988776 88999999999999999999999642110
Q ss_pred CCccccccccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 045553 1028 RPCEFFTAGLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQ 1073 (1082)
Q Consensus 1028 ~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~ 1073 (1082)
..... ..+...+.++.+++.+|++.||++||++.|++++
T Consensus 237 -----~~~~~--~~~~~~~~~l~~li~~~L~~dP~~Rps~~ell~h 275 (335)
T 3dls_A 237 -----VEAAI--HPPYLVSKELMSLVSGLLQPVPERRTTLEKLVTD 275 (335)
T ss_dssp -----TTTCC--CCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHHC
T ss_pred -----Hhhcc--CCCcccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 01111 1122345679999999999999999999999885
No 191
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*
Probab=100.00 E-value=2e-36 Score=341.71 Aligned_cols=263 Identities=18% Similarity=0.236 Sum_probs=210.4
Q ss_pred ccHHHHHHHhcCcccc-ceecccCceEEEEEEEc-CCeEEEEEEeecCc--cccHHHHHHHHHHHhccC-CCceeeEeee
Q 045553 791 LTYENVVRATAGFNVQ-NCIGSGGFGATYKAEII-PGVVVAVKRLSVGR--FQGVQQFAAEIRTLGRVQ-HPNLVTLIGY 865 (1082)
Q Consensus 791 ~~~~~~~~~~~~~~~~-~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~-h~niv~l~~~ 865 (1082)
+.+.......++|.+. +.||+|+||.||+|... +++.||+|++.... ......+.+|+.++++++ ||||++++++
T Consensus 18 ~~~~~~~~~~~~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~~~ 97 (327)
T 3lm5_A 18 LYFQSMENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEV 97 (327)
T ss_dssp CCSBCHHHHHHHEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEEEE
T ss_pred hHHHHHHhhhhEEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEEEE
Confidence 3444555667788887 89999999999999765 58999999987543 344678899999999995 6999999999
Q ss_pred eccCCeEEEEEeecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcC---CCcEE
Q 045553 866 HVSEAEMFLIYNYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDN---NLNAY 942 (1082)
Q Consensus 866 ~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~---~~~~k 942 (1082)
+.+....++||||+++|+|.+++.......+++..+..++.|++.||+|||+. +|+||||||+||+++. ++.+|
T Consensus 98 ~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~ql~~~L~~LH~~---givH~Dikp~NIl~~~~~~~~~~k 174 (327)
T 3lm5_A 98 YENTSEIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQN---NIVHLDLKPQNILLSSIYPLGDIK 174 (327)
T ss_dssp EECSSEEEEEEECCTTEEGGGGGSSCC-CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESCBTTBCCEE
T ss_pred EEeCCeEEEEEEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHC---CeecCcCChHHEEEecCCCCCcEE
Confidence 99999999999999999999999776567899999999999999999999999 9999999999999998 78999
Q ss_pred EeecccceecCCCCCccccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHH
Q 045553 943 LSDFGLARLLGTSETHATTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASM 1022 (1082)
Q Consensus 943 l~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~ 1022 (1082)
|+|||+++...... ......||+.|+|||++.+..++.++||||+|+++|||++|+.||.... .......
T Consensus 175 L~Dfg~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~--------~~~~~~~ 244 (327)
T 3lm5_A 175 IVDFGMSRKIGHAC--ELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGED--------NQETYLN 244 (327)
T ss_dssp ECCGGGCEEC-----------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSS--------HHHHHHH
T ss_pred EeeCccccccCCcc--ccccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC--------chHHHHH
Confidence 99999998765332 2234579999999999999999999999999999999999999996421 1222222
Q ss_pred HHhcCCCccccccccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 045553 1023 LLLQGRPCEFFTAGLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQ 1073 (1082)
Q Consensus 1023 ~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~ 1073 (1082)
...... . .........+..+.+++.+|++.||++|||+.|++++
T Consensus 245 i~~~~~-~------~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~ll~h 288 (327)
T 3lm5_A 245 ISQVNV-D------YSEETFSSVSQLATDFIQSLLVKNPEKRPTAEICLSH 288 (327)
T ss_dssp HHHTCC-C------CCTTTTTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTC
T ss_pred HHhccc-c------cCchhhcccCHHHHHHHHHHcCCChhhCcCHHHHhCC
Confidence 221110 0 0111122345678999999999999999999999864
No 192
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=100.00 E-value=4.3e-36 Score=356.98 Aligned_cols=253 Identities=23% Similarity=0.320 Sum_probs=210.4
Q ss_pred cCccccceecccCceEEEEEEEc-CCeEEEEEEeecCc---cccHHHHHHHHHHHhccCCCceeeEeeeeccCCeEEEEE
Q 045553 801 AGFNVQNCIGSGGFGATYKAEII-PGVVVAVKRLSVGR---FQGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFLIY 876 (1082)
Q Consensus 801 ~~~~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 876 (1082)
++|++.+.||+|+||.||+|+.. +|+.||||++.... ....+.+.+|++++++++||||+++++++.+....|+||
T Consensus 185 ~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lVm 264 (543)
T 3c4z_A 185 DWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLVM 264 (543)
T ss_dssp GGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCCEEEEEE
Confidence 56889999999999999999765 68999999996542 234567889999999999999999999999999999999
Q ss_pred eecCCCCHHHHHhhCC--CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCC
Q 045553 877 NYLPGGNLEKFIQDRP--RRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGT 954 (1082)
Q Consensus 877 E~~~~gsL~~~l~~~~--~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~ 954 (1082)
||+++|+|.+++.... ...+++..+..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+++.+..
T Consensus 265 E~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH~~---gIvHrDLKP~NILl~~~g~vkL~DFGla~~~~~ 341 (543)
T 3c4z_A 265 TIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQR---NIIYRDLKPENVLLDDDGNVRISDLGLAVELKA 341 (543)
T ss_dssp CCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCTTCEECCT
T ss_pred EeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHHHc---CCcccCCChHHEEEeCCCCEEEeecceeeeccC
Confidence 9999999999998653 44699999999999999999999999 999999999999999999999999999987654
Q ss_pred CCCccccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCCCccccc
Q 045553 955 SETHATTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQGRPCEFFT 1034 (1082)
Q Consensus 955 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 1034 (1082)
... ......||+.|+|||++.+..++.++||||+||++|||++|+.||..... ............... .
T Consensus 342 ~~~-~~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~~~----~~~~~~~~~~i~~~~-~----- 410 (543)
T 3c4z_A 342 GQT-KTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGE----KVENKELKQRVLEQA-V----- 410 (543)
T ss_dssp TCC-CBCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCTTC----CCCHHHHHHHHHHCC-C-----
T ss_pred CCc-ccccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCCcc----chhHHHHHHHHhhcc-c-----
Confidence 332 23445899999999999999999999999999999999999999975321 122333333333221 1
Q ss_pred cccCCCCChHHHHHHHHHHHHcccCCCCCCCCH-----HHHHH
Q 045553 1035 AGLWDCGPHDDLIEMLNLAIMCTGESLSSRPSM-----RQVAQ 1072 (1082)
Q Consensus 1035 ~~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~-----~ev~~ 1072 (1082)
..+...+..+.+++.+|++.||++||++ .||.+
T Consensus 411 -----~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~a~ei~~ 448 (543)
T 3c4z_A 411 -----TYPDKFSPASKDFCEALLQKDPEKRLGFRDGSCDGLRT 448 (543)
T ss_dssp -----CCCTTSCHHHHHHHHHHSCSSGGGSCCCBTTBSHHHHT
T ss_pred -----CCCcccCHHHHHHHHHhccCCHhHCCCCcccCHHHHHc
Confidence 1234456789999999999999999975 55553
No 193
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Probab=100.00 E-value=1.8e-36 Score=351.01 Aligned_cols=253 Identities=21% Similarity=0.245 Sum_probs=194.2
Q ss_pred hcCcccc-ceecccCceEEEEEEEc-CCeEEEEEEeecCccccHHHHHHHHHHH-hccCCCceeeEeeeecc----CCeE
Q 045553 800 TAGFNVQ-NCIGSGGFGATYKAEII-PGVVVAVKRLSVGRFQGVQQFAAEIRTL-GRVQHPNLVTLIGYHVS----EAEM 872 (1082)
Q Consensus 800 ~~~~~~~-~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l-~~l~h~niv~l~~~~~~----~~~~ 872 (1082)
.++|.+. +.||+|+||+||+|... +++.||||++... ..+.+|++++ +..+||||+++++++.. ....
T Consensus 60 ~~~y~~~~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~~-----~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~~~ 134 (400)
T 1nxk_A 60 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC-----PKARREVELHWRASQCPHIVRIVDVYENLYAGRKCL 134 (400)
T ss_dssp GGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS-----HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEE
T ss_pred cccceeccceeeeccCeEEEEEEECCCCCEEEEEEeCcc-----hhHHHHHHHHHHhcCCCCcceEeEEEeecccCCcEE
Confidence 3467766 78999999999999754 6899999998632 4567788886 45589999999998765 5678
Q ss_pred EEEEeecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcC---CCcEEEeecccc
Q 045553 873 FLIYNYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDN---NLNAYLSDFGLA 949 (1082)
Q Consensus 873 ~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~---~~~~kl~DfGla 949 (1082)
|+||||+++|+|.+++.......+++..+..++.||+.||+|||+. +|+||||||+||+++. ++.+||+|||++
T Consensus 135 ~lv~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~~~~kl~DFG~a 211 (400)
T 1nxk_A 135 LIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDFGFA 211 (400)
T ss_dssp EEEEECCCSEEHHHHHHCC---CCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSTTCCEEECCCTTC
T ss_pred EEEEEeCCCCcHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCcCcceEEEecCCCCccEEEEecccc
Confidence 9999999999999999876556799999999999999999999999 9999999999999997 789999999999
Q ss_pred eecCCCCCccccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCCC
Q 045553 950 RLLGTSETHATTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQGRP 1029 (1082)
Q Consensus 950 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1029 (1082)
+...... ......||+.|+|||++.+..++.++|||||||++|||++|+.||........ ...... .+..+..
T Consensus 212 ~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~-~~~~~~----~i~~~~~ 284 (400)
T 1nxk_A 212 KETTSHN--SLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAI-SPGMKT----RIRMGQY 284 (400)
T ss_dssp EECC-------------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSS-CCSHHH----HHHHTCC
T ss_pred cccCCCC--ccccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCCCccccc-cHHHHH----HHHcCcc
Confidence 8764322 23456789999999999999999999999999999999999999975432210 111111 1112211
Q ss_pred ccccccccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 045553 1030 CEFFTAGLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQ 1073 (1082)
Q Consensus 1030 ~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~ 1073 (1082)
. . .. ......+.++.+++.+|++.||++|||+.|++++
T Consensus 285 ~-~-~~----~~~~~~s~~~~~li~~~L~~dP~~Rpt~~eil~h 322 (400)
T 1nxk_A 285 E-F-PN----PEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNH 322 (400)
T ss_dssp C-C-CT----TTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred c-C-CC----cccccCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 1 0 00 0112345689999999999999999999999875
No 194
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Probab=100.00 E-value=2.5e-36 Score=341.20 Aligned_cols=258 Identities=23% Similarity=0.354 Sum_probs=207.1
Q ss_pred hcCccccceecccCceEEEEEEE------cCCeEEEEEEeecCc-cccHHHHHHHHHHHhccCCCceeeEeeeeccCCeE
Q 045553 800 TAGFNVQNCIGSGGFGATYKAEI------IPGVVVAVKRLSVGR-FQGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEM 872 (1082)
Q Consensus 800 ~~~~~~~~~lg~G~~g~Vy~a~~------~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~ 872 (1082)
..+|++.+.||+|+||.||+|+. .++..||||++.... .....++.+|+.++++++||||+++++++.+....
T Consensus 29 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 108 (327)
T 2yfx_A 29 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPR 108 (327)
T ss_dssp GGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred hhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccchhhHHHHHHHHHHHhhCCCCCCCeEEEEEcCCCCc
Confidence 46799999999999999999963 347789999996442 34456789999999999999999999999999999
Q ss_pred EEEEeecCCCCHHHHHhhCCC-----CCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcC---CCcEEEe
Q 045553 873 FLIYNYLPGGNLEKFIQDRPR-----RTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDN---NLNAYLS 944 (1082)
Q Consensus 873 ~lV~E~~~~gsL~~~l~~~~~-----~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~---~~~~kl~ 944 (1082)
++||||+++++|.+++..... ..+++..++.++.|++.||+|||+. +|+||||||+||+++. +..+||+
T Consensus 109 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~---~i~H~dlkp~NIli~~~~~~~~~kl~ 185 (327)
T 2yfx_A 109 FILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIG 185 (327)
T ss_dssp EEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSSTTCCEEEC
T ss_pred EEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhhC---CeecCcCCHhHEEEecCCCcceEEEC
Confidence 999999999999999987532 4589999999999999999999999 9999999999999984 4569999
Q ss_pred ecccceecCCCCC-ccccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCccCCCCCccHHHHHHH
Q 045553 945 DFGLARLLGTSET-HATTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELIS-DKKALDPSFCSFGNGFNIVAWASM 1022 (1082)
Q Consensus 945 DfGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~ellt-g~~p~~~~~~~~~~~~~~~~~~~~ 1022 (1082)
|||+++....... .......|++.|+|||++.+..++.++||||||+++|||++ |+.||... ........
T Consensus 186 Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~--------~~~~~~~~ 257 (327)
T 2yfx_A 186 DFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSK--------SNQEVLEF 257 (327)
T ss_dssp CCHHHHHHHC------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTC--------CHHHHHHH
T ss_pred ccccccccccccccccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCc--------CHHHHHHH
Confidence 9999976533222 22233567899999999999999999999999999999998 88888632 22233332
Q ss_pred HHhcCCCccccccccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhhC
Q 045553 1023 LLLQGRPCEFFTAGLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQLKQIQ 1078 (1082)
Q Consensus 1023 ~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L~~i~ 1078 (1082)
..... .. ..+...+..+.+++.+||+.+|++||++.||+++|+.+.
T Consensus 258 ~~~~~-~~---------~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~~~ 303 (327)
T 2yfx_A 258 VTSGG-RM---------DPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCT 303 (327)
T ss_dssp HHTTC-CC---------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred HhcCC-CC---------CCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHh
Confidence 22221 11 122344568999999999999999999999999998764
No 195
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}
Probab=100.00 E-value=3.4e-36 Score=345.46 Aligned_cols=250 Identities=16% Similarity=0.165 Sum_probs=204.9
Q ss_pred HhcCccccceecccCceEEEEE------EEcCCeEEEEEEeecCccccHHHHHHHHHHHhccC---CCceeeEeeeeccC
Q 045553 799 ATAGFNVQNCIGSGGFGATYKA------EIIPGVVVAVKRLSVGRFQGVQQFAAEIRTLGRVQ---HPNLVTLIGYHVSE 869 (1082)
Q Consensus 799 ~~~~~~~~~~lg~G~~g~Vy~a------~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~---h~niv~l~~~~~~~ 869 (1082)
...+|.+.+.||+|+||+||+| ...+++.||||++... ...++.+|++++++++ |+|++++++++...
T Consensus 63 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~---~~~~~~~e~~~~~~l~~~~~~~iv~~~~~~~~~ 139 (365)
T 3e7e_A 63 GSKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPA---NPWEFYIGTQLMERLKPSMQHMFMKFYSAHLFQ 139 (365)
T ss_dssp SSSEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSC---CHHHHHHHHHHHHHSCGGGGGGBCCEEEEEECS
T ss_pred CCEEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCC---ChhHHHHHHHHHHHhhhhhhhhhhhhheeeecC
Confidence 3467999999999999999999 3556899999998754 3456777888888776 99999999999999
Q ss_pred CeEEEEEeecCCCCHHHHHhhC---CCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcC---------
Q 045553 870 AEMFLIYNYLPGGNLEKFIQDR---PRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDN--------- 937 (1082)
Q Consensus 870 ~~~~lV~E~~~~gsL~~~l~~~---~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~--------- 937 (1082)
+..++||||+++|+|.++++.. ....+++..++.++.|++.||+|||+. +|+||||||+|||++.
T Consensus 140 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~---~ivHrDiKp~NIll~~~~~~~~~~~ 216 (365)
T 3e7e_A 140 NGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDC---EIIHGDIKPDNFILGNGFLEQDDED 216 (365)
T ss_dssp SCEEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECGGGTCC----
T ss_pred CCcEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhhC---CeecCCCCHHHEEecccccCccccc
Confidence 9999999999999999999752 245799999999999999999999999 9999999999999998
Q ss_pred --CCcEEEeecccceecCC-CCCccccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCc
Q 045553 938 --NLNAYLSDFGLARLLGT-SETHATTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGF 1014 (1082)
Q Consensus 938 --~~~~kl~DfGla~~~~~-~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~ 1014 (1082)
++.+||+|||+|+.+.. ..........||+.|+|||++.+..++.++|||||||++|||++|+.||......
T Consensus 217 ~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~----- 291 (365)
T 3e7e_A 217 DLSAGLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVKNEGG----- 291 (365)
T ss_dssp --CTTEEECCCTTCEEGGGSCTTEEECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCCCEEEETT-----
T ss_pred cccCCEEEeeCchhhhhhccCCCceeeeecCCCCCCChHHhcCCCCCccccHHHHHHHHHHHHhCCCccccCCCC-----
Confidence 89999999999986642 2233445567999999999999999999999999999999999999998643211
Q ss_pred cHHHHHHHHHhcCCCccccccccCCCCChHHHHHHHHHHHHcccCCCCCC-CCHHHHHHHHhhh
Q 045553 1015 NIVAWASMLLLQGRPCEFFTAGLWDCGPHDDLIEMLNLAIMCTGESLSSR-PSMRQVAQQLKQI 1077 (1082)
Q Consensus 1015 ~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~p~~R-Pt~~ev~~~L~~i 1077 (1082)
...++..+.. . .....+.+++..|++.+|.+| |++.++.+.|+++
T Consensus 292 ---------------~~~~~~~~~~-~--~~~~~~~~~~~~~l~~~p~~r~~~~~~l~~~l~~~ 337 (365)
T 3e7e_A 292 ---------------ECKPEGLFRR-L--PHLDMWNEFFHVMLNIPDCHHLPSLDLLRQKLKKV 337 (365)
T ss_dssp ---------------EEEECSCCTT-C--SSHHHHHHHHHHHHCCCCTTCCCCHHHHHHHHHHH
T ss_pred ---------------ceeechhccc-c--CcHHHHHHHHHHHcCCCCCCcchHHHHHHHHHHHH
Confidence 0001111111 1 225578889999999999998 6888888888764
No 196
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...
Probab=100.00 E-value=4.3e-36 Score=331.87 Aligned_cols=251 Identities=22% Similarity=0.314 Sum_probs=204.2
Q ss_pred cCccccceecccCceEEEEEEEc-CCeEEEEEEeecCcc------ccHHHHHHHHHHHhccCCCceeeEeeeeccCCeEE
Q 045553 801 AGFNVQNCIGSGGFGATYKAEII-PGVVVAVKRLSVGRF------QGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMF 873 (1082)
Q Consensus 801 ~~~~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~~------~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 873 (1082)
++|++.+.||+|+||.||+|... +++.||+|++..... ...+.+.+|++++++++||||+++++++.+....+
T Consensus 5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~ 84 (283)
T 3bhy_A 5 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVV 84 (283)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred hhhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCCCeEE
Confidence 56999999999999999999765 689999999875432 24678999999999999999999999999999999
Q ss_pred EEEeecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCC----cEEEeecccc
Q 045553 874 LIYNYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNL----NAYLSDFGLA 949 (1082)
Q Consensus 874 lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~----~~kl~DfGla 949 (1082)
+||||+++++|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++ .+||+|||.+
T Consensus 85 lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~~~~kl~dfg~~ 159 (283)
T 3bhy_A 85 LILELVSGGELFDFLAEK--ESLTEDEATQFLKQILDGVHYLHSK---RIAHFDLKPENIMLLDKNVPNPRIKLIDFGIA 159 (283)
T ss_dssp EEEECCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSSSSCCEEECCCTTC
T ss_pred EEEeecCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCChHHEEEecCCCCCCceEEEecccc
Confidence 999999999999999763 4689999999999999999999999 999999999999998877 8999999999
Q ss_pred eecCCCCCccccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCCC
Q 045553 950 RLLGTSETHATTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQGRP 1029 (1082)
Q Consensus 950 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1029 (1082)
........ .....|++.|+|||++.+..++.++||||||+++|||++|+.||... ...+......... .
T Consensus 160 ~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~--------~~~~~~~~~~~~~-~ 228 (283)
T 3bhy_A 160 HKIEAGNE--FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGE--------TKQETLTNISAVN-Y 228 (283)
T ss_dssp EECC----------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCS--------SHHHHHHHHHTTC-C
T ss_pred eeccCCCc--ccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCCCc--------chHHHHHHhHhcc-c
Confidence 87644322 23456899999999999999999999999999999999999999632 1122222221111 1
Q ss_pred ccccccccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 045553 1030 CEFFTAGLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQ 1073 (1082)
Q Consensus 1030 ~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~ 1073 (1082)
. .+... ....+..+.+++.+|++.||++||++.|++++
T Consensus 229 ~--~~~~~----~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h 266 (283)
T 3bhy_A 229 D--FDEEY----FSNTSELAKDFIRRLLVKDPKRRMTIAQSLEH 266 (283)
T ss_dssp C--CCHHH----HTTCCHHHHHHHHTTSCSSGGGSCCHHHHHHC
T ss_pred C--Ccchh----cccCCHHHHHHHHHHccCCHhHCcCHHHHHhC
Confidence 0 00000 11234678999999999999999999999873
No 197
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}
Probab=100.00 E-value=4e-36 Score=337.00 Aligned_cols=262 Identities=23% Similarity=0.310 Sum_probs=200.2
Q ss_pred cCccccceecccCceEEEEEEEc-CCeEEEEEEeecCcc--ccHHHHHHHHHHHhccCCCceeeEeeeeccCCeEEEEEe
Q 045553 801 AGFNVQNCIGSGGFGATYKAEII-PGVVVAVKRLSVGRF--QGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFLIYN 877 (1082)
Q Consensus 801 ~~~~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~E 877 (1082)
++|++.+.||+|+||+||+|... +|+.||||++..... ...+.+.+|++++++++||||+++++++.+.+..++|||
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 82 (311)
T 4agu_A 3 EKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLVFE 82 (311)
T ss_dssp CCEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred ccceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheeecCCeEEEEEE
Confidence 57999999999999999999765 589999999865433 235668899999999999999999999999999999999
Q ss_pred ecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCCCCC
Q 045553 878 YLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGTSET 957 (1082)
Q Consensus 878 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~ 957 (1082)
|+++++|.++++.. ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||.+........
T Consensus 83 ~~~~~~l~~~~~~~--~~~~~~~~~~i~~~l~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 157 (311)
T 4agu_A 83 YCDHTVLHELDRYQ--RGVPEHLVKSITWQTLQAVNFCHKH---NCIHRDVKPENILITKHSVIKLCDFGFARLLTGPSD 157 (311)
T ss_dssp CCSEEHHHHHHHTS--SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECC----
T ss_pred eCCCchHHHHHhhh--cCCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCCChhhEEEcCCCCEEEeeCCCchhccCccc
Confidence 99999999988763 4689999999999999999999999 999999999999999999999999999987653322
Q ss_pred ccccCcccCCCcccchhccc-CCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhc----------
Q 045553 958 HATTDVAGTFGYVAPEYAMT-CRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQ---------- 1026 (1082)
Q Consensus 958 ~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~---------- 1026 (1082)
......|+..|+|||++.+ ..++.++||||+|+++|||++|+.||..... ......+......
T Consensus 158 -~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~ 231 (311)
T 4agu_A 158 -YYDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSD-----VDQLYLIRKTLGDLIPRHQQVFS 231 (311)
T ss_dssp ---------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSH-----HHHHHHHHHHHCSCCHHHHHHHH
T ss_pred -ccCCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCH-----HHHHHHHHHHhcccccccccccc
Confidence 2234578999999999976 6689999999999999999999999964321 1111111111110
Q ss_pred -CCCc---cccccccCCC---CChHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 045553 1027 -GRPC---EFFTAGLWDC---GPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQ 1073 (1082)
Q Consensus 1027 -~~~~---~~~d~~l~~~---~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~ 1073 (1082)
.... ...++..... .....+..+.+++.+|++.||++|||+.|++++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 285 (311)
T 4agu_A 232 TNQYFSGVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLHH 285 (311)
T ss_dssp TCGGGTTCCCCCCSSCCCHHHHCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHTS
T ss_pred cccccccCcCCCccccchhhhhcccccHHHHHHHHHHccCChhhcCCHHHHhcC
Confidence 0000 0000000000 002345678999999999999999999999864
No 198
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}
Probab=100.00 E-value=1.4e-36 Score=344.86 Aligned_cols=254 Identities=22% Similarity=0.330 Sum_probs=191.0
Q ss_pred hcCccccceecccCceEEEEEEEc-CCeEEEEEEeecCccccHHHHHHHHHHHhccC-CCceeeEeeee--------ccC
Q 045553 800 TAGFNVQNCIGSGGFGATYKAEII-PGVVVAVKRLSVGRFQGVQQFAAEIRTLGRVQ-HPNLVTLIGYH--------VSE 869 (1082)
Q Consensus 800 ~~~~~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~--------~~~ 869 (1082)
..+|++.++||+|+||.||+|+.. +++.||||++........+.+.+|+.+++++. ||||+++++++ ...
T Consensus 27 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~~ 106 (337)
T 3ll6_A 27 ELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQ 106 (337)
T ss_dssp TEEEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTTSS
T ss_pred CceEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCCchHHHHHHHHHHHHHHHhccCCChhhccccccccccccccCC
Confidence 457999999999999999999754 68999999997766666778999999999996 99999999988 344
Q ss_pred CeEEEEEeecCCCCHHHHHhhC-CCCCCCHHHHHHHHHHHHHHHHHHhhCCCCC--eEeccCCCCCEEEcCCCcEEEeec
Q 045553 870 AEMFLIYNYLPGGNLEKFIQDR-PRRTVEWSMLHKIALDVARALAYLHDECVPR--VLHRDIKPSNILLDNNLNAYLSDF 946 (1082)
Q Consensus 870 ~~~~lV~E~~~~gsL~~~l~~~-~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~--ivH~Dlk~~Nill~~~~~~kl~Df 946 (1082)
...++||||+. |+|.+++... ....+++..++.++.|++.||+|||+. + |+||||||+||+++.++.+||+||
T Consensus 107 ~~~~lv~e~~~-g~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~~~ivH~Dikp~NIl~~~~~~~kl~Df 182 (337)
T 3ll6_A 107 AEFLLLTELCK-GQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQ---KPPIIHRDLKVENLLLSNQGTIKLCDF 182 (337)
T ss_dssp EEEEEEEECCS-EEHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHHHTS---SSCCBCCCCCGGGCEECTTSCEEBCCC
T ss_pred ceEEEEEEecC-CCHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhC---CCCEEEccCCcccEEECCCCCEEEecC
Confidence 56899999995 7999988752 245699999999999999999999999 8 999999999999999999999999
Q ss_pred ccceecCCCCCc-----------cccCcccCCCcccchhc---ccCCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCC
Q 045553 947 GLARLLGTSETH-----------ATTDVAGTFGYVAPEYA---MTCRVSDKADVYSFGVVLLELISDKKALDPSFCSFGN 1012 (1082)
Q Consensus 947 Gla~~~~~~~~~-----------~~~~~~gt~~y~aPE~~---~~~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~ 1012 (1082)
|+++........ ......||+.|+|||++ .+..++.++||||||+++|||++|+.||......
T Consensus 183 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~--- 259 (337)
T 3ll6_A 183 GSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAKL--- 259 (337)
T ss_dssp TTCBCCSSCC-------------------------------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC---------
T ss_pred ccceeccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCCcchhHH---
Confidence 999876543221 11134689999999998 5677899999999999999999999999632110
Q ss_pred CccHHHHHHHHHhcCCCccccccccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhhC
Q 045553 1013 GFNIVAWASMLLLQGRPCEFFTAGLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQLKQIQ 1078 (1082)
Q Consensus 1013 ~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L~~i~ 1078 (1082)
.. +........+......+.+++.+|++.+|++||++.|++++|+.+.
T Consensus 260 -----~~-------------~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~~~~ 307 (337)
T 3ll6_A 260 -----RI-------------VNGKYSIPPHDTQYTVFHSLIRAMLQVNPEERLSIAEVVHQLQEIA 307 (337)
T ss_dssp ------------------------CCCCTTCCSSGGGHHHHHHHSCSSGGGSCCHHHHHHHHHHHH
T ss_pred -----Hh-------------hcCcccCCcccccchHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 00 0011111111222345889999999999999999999999998764
No 199
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Probab=100.00 E-value=3.9e-36 Score=335.87 Aligned_cols=252 Identities=23% Similarity=0.313 Sum_probs=205.7
Q ss_pred HhcCccccceecccCceEEEEEEEc-CCeEEEEEEeecCccccHHHHHHHHHHHhccCCCceeeEeeeeccCCeEEEEEe
Q 045553 799 ATAGFNVQNCIGSGGFGATYKAEII-PGVVVAVKRLSVGRFQGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFLIYN 877 (1082)
Q Consensus 799 ~~~~~~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~E 877 (1082)
..++|++.+.||+|+||.||+|+.. +|+.||+|++........+.+.+|++++++++||||+++++++.+....++|||
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 86 (304)
T 2jam_A 7 IRKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLVMQ 86 (304)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC------HHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred hhccceeeeeccCCCCceEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHhCCCCCeeehhhhcccCCEEEEEEE
Confidence 3457999999999999999999765 689999999986655555678999999999999999999999999999999999
Q ss_pred ecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEE---cCCCcEEEeecccceecCC
Q 045553 878 YLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILL---DNNLNAYLSDFGLARLLGT 954 (1082)
Q Consensus 878 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill---~~~~~~kl~DfGla~~~~~ 954 (1082)
|+++++|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+||++ +.++.+||+|||++.....
T Consensus 87 ~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~~~~ 161 (304)
T 2jam_A 87 LVSGGELFDRILER--GVYTEKDASLVIQQVLSAVKYLHEN---GIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQN 161 (304)
T ss_dssp CCCSCBHHHHHHHH--SCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCSCCGGGCEESSSSTTCCEEBCSCSTTCCCCC
T ss_pred cCCCccHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEecCCCCCCEEEccCCcceecCC
Confidence 99999999999764 4689999999999999999999999 99999999999999 7889999999999976432
Q ss_pred CCCccccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCCCccccc
Q 045553 955 SETHATTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQGRPCEFFT 1034 (1082)
Q Consensus 955 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 1034 (1082)
. ......|++.|+|||++.+..++.++||||+|+++|||++|+.||... ........... +... ..
T Consensus 162 ~---~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~--------~~~~~~~~i~~-~~~~--~~ 227 (304)
T 2jam_A 162 G---IMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEE--------TESKLFEKIKE-GYYE--FE 227 (304)
T ss_dssp B---TTHHHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTTS--------CHHHHHHHHHH-CCCC--CC
T ss_pred C---ccccccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCCC--------CHHHHHHHHHc-CCCC--CC
Confidence 2 223346899999999999999999999999999999999999999642 12222222222 2111 01
Q ss_pred cccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 045553 1035 AGLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQ 1073 (1082)
Q Consensus 1035 ~~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~ 1073 (1082)
.......+..+.+++.+|++.||++||++.|++++
T Consensus 228 ----~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h 262 (304)
T 2jam_A 228 ----SPFWDDISESAKDFICHLLEKDPNERYTCEKALSH 262 (304)
T ss_dssp ----TTTTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred ----ccccccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 11123345689999999999999999999999863
No 200
>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*
Probab=100.00 E-value=3.5e-36 Score=367.66 Aligned_cols=247 Identities=28% Similarity=0.389 Sum_probs=201.4
Q ss_pred ceecccCceEEEEEEEc---CCeEEEEEEeecCcc--ccHHHHHHHHHHHhccCCCceeeEeeeeccCCeEEEEEeecCC
Q 045553 807 NCIGSGGFGATYKAEII---PGVVVAVKRLSVGRF--QGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFLIYNYLPG 881 (1082)
Q Consensus 807 ~~lg~G~~g~Vy~a~~~---~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~~~~ 881 (1082)
+.||+|+||.||+|.+. .++.||||+++.... ...+++.+|++++++++||||+++++++.. +..++||||+++
T Consensus 375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~-~~~~lv~E~~~~ 453 (635)
T 4fl3_A 375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEA-ESWMLVMEMAEL 453 (635)
T ss_dssp EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEES-SSEEEEEECCTT
T ss_pred CEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEec-CCEEEEEEccCC
Confidence 47999999999999653 468899999976432 346789999999999999999999999864 568999999999
Q ss_pred CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCCCCC--cc
Q 045553 882 GNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGTSET--HA 959 (1082)
Q Consensus 882 gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~--~~ 959 (1082)
|+|.++++.. ..+++..+..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+++.+..... ..
T Consensus 454 g~L~~~l~~~--~~l~~~~~~~i~~qi~~~L~yLH~~---~iiHrDLkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~ 528 (635)
T 4fl3_A 454 GPLNKYLQQN--RHVKDKNIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKA 528 (635)
T ss_dssp EEHHHHHHHC--TTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCTTHHHHTTC-------
T ss_pred CCHHHHHhhC--CCCCHHHHHHHHHHHHHHHHHHHHC---CEeCCCCChHhEEEeCCCCEEEEEcCCccccccCcccccc
Confidence 9999999874 5689999999999999999999999 999999999999999999999999999987754332 22
Q ss_pred ccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCccCCCCCccHHHHHHHHHhcCCCccccccccC
Q 045553 960 TTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELIS-DKKALDPSFCSFGNGFNIVAWASMLLLQGRPCEFFTAGLW 1038 (1082)
Q Consensus 960 ~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 1038 (1082)
.....+++.|+|||++.+..++.++|||||||++|||++ |+.||... ...+.... +..+..
T Consensus 529 ~~~~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~--------~~~~~~~~-i~~~~~--------- 590 (635)
T 4fl3_A 529 QTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGM--------KGSEVTAM-LEKGER--------- 590 (635)
T ss_dssp ------CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTC--------CHHHHHHH-HHTTCC---------
T ss_pred ccCCCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC--------CHHHHHHH-HHcCCC---------
Confidence 233456789999999999999999999999999999998 99999642 12222222 222221
Q ss_pred CCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhh
Q 045553 1039 DCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQLKQI 1077 (1082)
Q Consensus 1039 ~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L~~i 1077 (1082)
...+...+.++.+++.+||+.||++||++.+|++.|+++
T Consensus 591 ~~~p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~ 629 (635)
T 4fl3_A 591 MGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNY 629 (635)
T ss_dssp CCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHH
T ss_pred CCCCCCCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHH
Confidence 123345567899999999999999999999999999875
No 201
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=4e-36 Score=347.84 Aligned_cols=260 Identities=25% Similarity=0.352 Sum_probs=193.8
Q ss_pred HhcCccccceecccCceEEEEEEE-cCCeEEEEEEeecC--ccccHHHHHHHHHHHhccC-CCceeeEeeeeccC--CeE
Q 045553 799 ATAGFNVQNCIGSGGFGATYKAEI-IPGVVVAVKRLSVG--RFQGVQQFAAEIRTLGRVQ-HPNLVTLIGYHVSE--AEM 872 (1082)
Q Consensus 799 ~~~~~~~~~~lg~G~~g~Vy~a~~-~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~--~~~ 872 (1082)
...+|++.+.||+|+||.||+|.. .+|+.||||++... .....+.+.+|+.+++++. ||||+++++++... ...
T Consensus 7 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~~~ 86 (388)
T 3oz6_A 7 VLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDRDV 86 (388)
T ss_dssp HHTTEEEEEC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSSCE
T ss_pred ccCceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCCEE
Confidence 467899999999999999999965 46899999998643 2344567889999999997 99999999998754 478
Q ss_pred EEEEeecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceec
Q 045553 873 FLIYNYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLL 952 (1082)
Q Consensus 873 ~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~ 952 (1082)
|+||||++ ++|.++++.. .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.+
T Consensus 87 ~lv~e~~~-~~L~~~~~~~---~~~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~ 159 (388)
T 3oz6_A 87 YLVFDYME-TDLHAVIRAN---ILEPVHKQYVVYQLIKVIKYLHSG---GLLHRDMKPSNILLNAECHVKVADFGLSRSF 159 (388)
T ss_dssp EEEEECCS-EEHHHHHHHT---CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEES
T ss_pred EEEecccC-cCHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCCCHHHeEEcCCCCEEecCCcccccc
Confidence 99999996 6999999863 689999999999999999999999 9999999999999999999999999999876
Q ss_pred CCCC--------------------CccccCcccCCCcccchhccc-CCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCC
Q 045553 953 GTSE--------------------THATTDVAGTFGYVAPEYAMT-CRVSDKADVYSFGVVLLELISDKKALDPSFCSFG 1011 (1082)
Q Consensus 953 ~~~~--------------------~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~ 1011 (1082)
.... .......+||+.|+|||++.+ ..++.++||||+||++|||++|+.||....
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~---- 235 (388)
T 3oz6_A 160 VNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSS---- 235 (388)
T ss_dssp SSCCCCCCCGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSS----
T ss_pred cccccccccccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCC----
Confidence 4311 112344679999999999986 678999999999999999999999997431
Q ss_pred CCccHHHHHHHHHh-cCCCc-cccc----------------------cccCC------------CCChHHHHHHHHHHHH
Q 045553 1012 NGFNIVAWASMLLL-QGRPC-EFFT----------------------AGLWD------------CGPHDDLIEMLNLAIM 1055 (1082)
Q Consensus 1012 ~~~~~~~~~~~~~~-~~~~~-~~~d----------------------~~l~~------------~~~~~~~~~l~~li~~ 1055 (1082)
....+..+.. -+... +.+. ..... ..+.....++.+++.+
T Consensus 236 ----~~~~~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~ 311 (388)
T 3oz6_A 236 ----TMNQLERIIGVIDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKADCNEEALDLLDK 311 (388)
T ss_dssp ----HHHHHHHHHHHHCCCCHHHHHTSCCSSHHHHHHHHHHHCC-----CCCCHHHHHHHHHHHCTTCCCCHHHHHHHHH
T ss_pred ----HHHHHHHHHHhcCCCCHHHHHhccCHHHHHHHHhCcccccccCCCHHHhCcchhhhcccccccccCCHHHHHHHHH
Confidence 1111111111 01000 0000 00000 0011234678999999
Q ss_pred cccCCCCCCCCHHHHHHH
Q 045553 1056 CTGESLSSRPSMRQVAQQ 1073 (1082)
Q Consensus 1056 cl~~~p~~RPt~~ev~~~ 1073 (1082)
|++.||++|||+.|++++
T Consensus 312 ~L~~dP~~R~t~~e~l~H 329 (388)
T 3oz6_A 312 LLQFNPNKRISANDALKH 329 (388)
T ss_dssp HCCSSGGGSCCHHHHTTS
T ss_pred hhccCcccCCCHHHHhCC
Confidence 999999999999999876
No 202
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Probab=100.00 E-value=2e-36 Score=357.00 Aligned_cols=257 Identities=25% Similarity=0.357 Sum_probs=196.6
Q ss_pred hcCccccceecccCceEEEEEEE-cCCeEEEEEEeecC--ccccHHHHHHHHHHHhccCCCceeeEeeeeccC------C
Q 045553 800 TAGFNVQNCIGSGGFGATYKAEI-IPGVVVAVKRLSVG--RFQGVQQFAAEIRTLGRVQHPNLVTLIGYHVSE------A 870 (1082)
Q Consensus 800 ~~~~~~~~~lg~G~~g~Vy~a~~-~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~------~ 870 (1082)
.++|++.+.||+|+||+||+|.. .+++.||||++... .....+.+.+|+.+++.++||||+++++++... .
T Consensus 61 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~ 140 (464)
T 3ttj_A 61 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQ 140 (464)
T ss_dssp ETTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCC
T ss_pred cCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccCC
Confidence 46899999999999999999964 46899999999754 234456788999999999999999999998654 4
Q ss_pred eEEEEEeecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccce
Q 045553 871 EMFLIYNYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLAR 950 (1082)
Q Consensus 871 ~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~ 950 (1082)
..|+||||+++ ++.+.+.. .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++
T Consensus 141 ~~~lv~E~~~~-~l~~~~~~----~l~~~~~~~~~~qil~aL~~lH~~---~iiHrDlkp~NIll~~~~~~kl~DFG~a~ 212 (464)
T 3ttj_A 141 DVYLVMELMDA-NLCQVIQM----ELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLAR 212 (464)
T ss_dssp EEEEEEECCSE-EHHHHHTS----CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCCCC-
T ss_pred eEEEEEeCCCC-CHHHHHhh----cCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChHhEEEeCCCCEEEEEEEeee
Confidence 67999999965 57777653 489999999999999999999999 99999999999999999999999999998
Q ss_pred ecCCCCCccccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCCCc
Q 045553 951 LLGTSETHATTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQGRPC 1030 (1082)
Q Consensus 951 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1030 (1082)
..... .......||+.|+|||++.+..++.++||||+||++|||++|+.||.... ...++......-+...
T Consensus 213 ~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF~g~~-------~~~~~~~i~~~lg~p~ 283 (464)
T 3ttj_A 213 TAGTS--FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRD-------YIDQWNKVIEQLGTPC 283 (464)
T ss_dssp ----C--CCC----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSS-------HHHHHHHHHHHHCSCC
T ss_pred ecCCC--cccCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCCCCCC-------HHHHHHHHHHhcCCCC
Confidence 76432 23345689999999999999999999999999999999999999997421 1222222211111110
Q ss_pred -ccc--------------------------ccccCCCC---ChHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 045553 1031 -EFF--------------------------TAGLWDCG---PHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQ 1073 (1082)
Q Consensus 1031 -~~~--------------------------d~~l~~~~---~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~ 1073 (1082)
+.+ ...+.... ......++.+++.+|++.||++|||+.|++++
T Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~H 356 (464)
T 3ttj_A 284 PEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQH 356 (464)
T ss_dssp HHHHTTSCHHHHHHHTTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred HHHHHHcchhhhhHhhcccccCCCChHHhCcccccccccccccccCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 000 00000000 01125679999999999999999999999874
No 203
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*
Probab=100.00 E-value=4.6e-36 Score=333.62 Aligned_cols=249 Identities=20% Similarity=0.293 Sum_probs=208.5
Q ss_pred hcCccccceecccCceEEEEEEEc-CCeEEEEEEeecCc---cccHHHHHHHHHHHhccCCCceeeEeeeeccCCeEEEE
Q 045553 800 TAGFNVQNCIGSGGFGATYKAEII-PGVVVAVKRLSVGR---FQGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFLI 875 (1082)
Q Consensus 800 ~~~~~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV 875 (1082)
..+|.+.+.||+|+||.||+|... +++.||+|++.... ....+.+.+|++++++++||||+++++++.+.+..++|
T Consensus 14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv 93 (294)
T 2rku_A 14 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVV 93 (294)
T ss_dssp TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred ccceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCEEEEE
Confidence 457999999999999999999765 57899999986542 23456788999999999999999999999999999999
Q ss_pred EeecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCCC
Q 045553 876 YNYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGTS 955 (1082)
Q Consensus 876 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~ 955 (1082)
|||+++++|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||.+......
T Consensus 94 ~e~~~~~~L~~~~~~~--~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~ 168 (294)
T 2rku_A 94 LELCRRRSLLELHKRR--KALTEPEARYYLRQIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYD 168 (294)
T ss_dssp EECCTTCBHHHHHHHH--CSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEECCST
T ss_pred EecCCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEcCCCCEEEEeccCceecccC
Confidence 9999999999998763 4689999999999999999999999 9999999999999999999999999999876533
Q ss_pred CCccccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCCCcccccc
Q 045553 956 ETHATTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQGRPCEFFTA 1035 (1082)
Q Consensus 956 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 1035 (1082)
.. ......|++.|+|||++.+..++.++||||+|+++|||++|+.||... ...+...... .+..
T Consensus 169 ~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~--------~~~~~~~~~~-~~~~------ 232 (294)
T 2rku_A 169 GE-RKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETS--------CLKETYLRIK-KNEY------ 232 (294)
T ss_dssp TC-CBCCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCCS--------SHHHHHHHHH-TTCC------
T ss_pred cc-ccccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCCC--------CHHHHHHHHh-hccC------
Confidence 22 233457899999999999988999999999999999999999999642 1222222222 1111
Q ss_pred ccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 045553 1036 GLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQ 1073 (1082)
Q Consensus 1036 ~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~ 1073 (1082)
..+......+.+++.+|++.||++||++.|++++
T Consensus 233 ----~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~ 266 (294)
T 2rku_A 233 ----SIPKHINPVAASLIQKMLQTDPTARPTINELLND 266 (294)
T ss_dssp ----CCCTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred ----CCccccCHHHHHHHHHHcccChhhCcCHHHHhhC
Confidence 1223344678999999999999999999999874
No 204
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Probab=100.00 E-value=1.2e-36 Score=335.61 Aligned_cols=257 Identities=25% Similarity=0.403 Sum_probs=208.1
Q ss_pred hcCccccceecccCceEEEEEEEc-CCeEEEEEEeecCc--cccHHHHHHHHHHHhccCCCceeeEeeeec--cCCeEEE
Q 045553 800 TAGFNVQNCIGSGGFGATYKAEII-PGVVVAVKRLSVGR--FQGVQQFAAEIRTLGRVQHPNLVTLIGYHV--SEAEMFL 874 (1082)
Q Consensus 800 ~~~~~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~--~~~~~~l 874 (1082)
.++|++.+.||+|+||.||+|... +++.||+|++.... ....+.+.+|++++++++||||+++++++. .....++
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 84 (279)
T 2w5a_A 5 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYI 84 (279)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEEEE
T ss_pred hhheeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceEEE
Confidence 457999999999999999999765 68999999997543 234567899999999999999999999874 4678999
Q ss_pred EEeecCCCCHHHHHhhCC--CCCCCHHHHHHHHHHHHHHHHHHhhCCCCC-----eEeccCCCCCEEEcCCCcEEEeecc
Q 045553 875 IYNYLPGGNLEKFIQDRP--RRTVEWSMLHKIALDVARALAYLHDECVPR-----VLHRDIKPSNILLDNNLNAYLSDFG 947 (1082)
Q Consensus 875 V~E~~~~gsL~~~l~~~~--~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~-----ivH~Dlk~~Nill~~~~~~kl~DfG 947 (1082)
||||+++++|.+++.... ...+++..++.++.|++.||+|||+. + |+||||||+||+++.++.+||+|||
T Consensus 85 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~~~~~~ivH~dl~p~NIl~~~~~~~kl~dfg 161 (279)
T 2w5a_A 85 VMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRR---SDGGHTVLHRDLKPANVFLDGKQNVKLGDFG 161 (279)
T ss_dssp EEECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHH---C------CCCCCSGGGEEECSSSCEEECCCC
T ss_pred EEeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHhcc---cCCCCeeEEeccchhhEEEcCCCCEEEecCc
Confidence 999999999999997632 34589999999999999999999998 7 9999999999999999999999999
Q ss_pred cceecCCCCCccccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcC
Q 045553 948 LARLLGTSETHATTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQG 1027 (1082)
Q Consensus 948 la~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 1027 (1082)
.++....... ......|+..|+|||++.+..++.++||||||+++|||++|+.||... ...+.... +..+
T Consensus 162 ~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~--------~~~~~~~~-i~~~ 231 (279)
T 2w5a_A 162 LARILNHDTS-FAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAF--------SQKELAGK-IREG 231 (279)
T ss_dssp HHHHC---CH-HHHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSSCCS--------SHHHHHHH-HHHT
T ss_pred hheeeccccc-cccccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCccc--------CHHHHHHH-Hhhc
Confidence 9987643322 222346899999999999999999999999999999999999998742 12222222 2222
Q ss_pred CCccccccccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhhC
Q 045553 1028 RPCEFFTAGLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQLKQIQ 1078 (1082)
Q Consensus 1028 ~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L~~i~ 1078 (1082)
... ..+...+.++.+++.+|++.+|++||++.||++++..-.
T Consensus 232 ~~~---------~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~~~~~~ 273 (279)
T 2w5a_A 232 KFR---------RIPYRYSDELNEIITRMLNLKDYHRPSVEEILENPLILE 273 (279)
T ss_dssp CCC---------CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSTTCCG
T ss_pred ccc---------cCCcccCHHHHHHHHHHcCCCcccCCCHHHHHhChhhhh
Confidence 221 122344568999999999999999999999998775443
No 205
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...
Probab=100.00 E-value=2.9e-36 Score=331.93 Aligned_cols=254 Identities=24% Similarity=0.319 Sum_probs=207.8
Q ss_pred HhcCccccceecccCceEEEEEEEc-CCeEEEEEEeecCc-cccHHHHHHHHHHHhccCCCceeeEeeeeccCCeEEEEE
Q 045553 799 ATAGFNVQNCIGSGGFGATYKAEII-PGVVVAVKRLSVGR-FQGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFLIY 876 (1082)
Q Consensus 799 ~~~~~~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 876 (1082)
..++|++.+.||+|+||.||+|... +++.||||++.... ....+.+.+|+++++.++||||+++++++.+.+..++||
T Consensus 5 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 84 (276)
T 2yex_A 5 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFL 84 (276)
T ss_dssp HHHHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCTTHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred eecceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccchhhhHHHHHHHHHHHhcCCCCceeeeeEEEcCCEEEEEE
Confidence 3467999999999999999999765 68999999997543 244577899999999999999999999999999999999
Q ss_pred eecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCCCC
Q 045553 877 NYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGTSE 956 (1082)
Q Consensus 877 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~ 956 (1082)
||+++++|.+++.. ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||.+..+....
T Consensus 85 e~~~~~~L~~~l~~--~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~ 159 (276)
T 2yex_A 85 EYCSGGELFDRIEP--DIGMPEPDAQRFFHQLMAGVVYLHGI---GITHRDIKPENLLLDERDNLKISDFGLATVFRYNN 159 (276)
T ss_dssp ECCTTEEGGGGSBT--TTBCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTCEECEETT
T ss_pred EecCCCcHHHHHhh--ccCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCChHHEEEccCCCEEEeeCCCccccCCCc
Confidence 99999999999875 34689999999999999999999999 99999999999999999999999999998764332
Q ss_pred C-ccccCcccCCCcccchhcccCCC-CchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCCCccccc
Q 045553 957 T-HATTDVAGTFGYVAPEYAMTCRV-SDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQGRPCEFFT 1034 (1082)
Q Consensus 957 ~-~~~~~~~gt~~y~aPE~~~~~~~-~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 1034 (1082)
. .......|+..|+|||++.+..+ +.++||||+|+++|||++|+.||...... ......| .......
T Consensus 160 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~---~~~~~~~----~~~~~~~---- 228 (276)
T 2yex_A 160 RERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDS---CQEYSDW----KEKKTYL---- 228 (276)
T ss_dssp EECCBCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTT---SHHHHHH----HTTCTTS----
T ss_pred chhcccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCchH---HHHHHHh----hhccccc----
Confidence 2 22345678999999999987665 77999999999999999999999743211 1112121 1111000
Q ss_pred cccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 045553 1035 AGLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQ 1073 (1082)
Q Consensus 1035 ~~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~ 1073 (1082)
......+..+.+++.+|++.||++|||+.|++++
T Consensus 229 -----~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 262 (276)
T 2yex_A 229 -----NPWKKIDSAPLALLHKILVENPSARITIPDIKKD 262 (276)
T ss_dssp -----TTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred -----CchhhcCHHHHHHHHHHCCCCchhCCCHHHHhcC
Confidence 1112345678999999999999999999999864
No 206
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Probab=100.00 E-value=1.8e-36 Score=335.83 Aligned_cols=246 Identities=23% Similarity=0.315 Sum_probs=201.8
Q ss_pred HhcCccccceecccCceEEEEEEEc-CCeEEEEEEeecCc--cccHHHHHHHHHHHhcc-CCCceeeEeeeeccCCeEEE
Q 045553 799 ATAGFNVQNCIGSGGFGATYKAEII-PGVVVAVKRLSVGR--FQGVQQFAAEIRTLGRV-QHPNLVTLIGYHVSEAEMFL 874 (1082)
Q Consensus 799 ~~~~~~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~l 874 (1082)
..++|++.+.||+|+||+||+|... +++.||||++.... .....++.+|+..+..+ +||||+++++++.+.+..++
T Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~~l 88 (289)
T 1x8b_A 9 YTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLI 88 (289)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEEEE
T ss_pred ccchhhhhhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEE
Confidence 4567999999999999999999765 68999999997642 33456788999999999 99999999999999999999
Q ss_pred EEeecCCCCHHHHHhhCC--CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCC--------------
Q 045553 875 IYNYLPGGNLEKFIQDRP--RRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNN-------------- 938 (1082)
Q Consensus 875 V~E~~~~gsL~~~l~~~~--~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~-------------- 938 (1082)
||||+++++|.+++.... ...+++..++.++.|++.||+|||+. +|+||||||+||+++.+
T Consensus 89 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dikp~NIl~~~~~~~~~~~~~~~~~~ 165 (289)
T 1x8b_A 89 QNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSM---SLVHMDIKPSNIFISRTSIPNAASEEGDEDD 165 (289)
T ss_dssp EEECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEC----------------
T ss_pred EEEecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHHhC---CEeecCCCHHHEEEcCCCCCccccccccccc
Confidence 999999999999998642 25689999999999999999999999 99999999999999844
Q ss_pred -----CcEEEeecccceecCCCCCccccCcccCCCcccchhcccC-CCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCC
Q 045553 939 -----LNAYLSDFGLARLLGTSETHATTDVAGTFGYVAPEYAMTC-RVSDKADVYSFGVVLLELISDKKALDPSFCSFGN 1012 (1082)
Q Consensus 939 -----~~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~ 1012 (1082)
..+||+|||.+....... ...|++.|+|||++.+. .++.++||||||+++|||++|..++...
T Consensus 166 ~~~~~~~~kl~Dfg~~~~~~~~~-----~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~------ 234 (289)
T 1x8b_A 166 WASNKVMFKIGDLGHVTRISSPQ-----VEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNG------ 234 (289)
T ss_dssp ----CCCEEECCCTTCEETTCSC-----CCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCCCCSSS------
T ss_pred ccCCceEEEEcccccccccCCcc-----ccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCCCCcch------
Confidence 479999999998765432 23589999999999875 5678999999999999999998776421
Q ss_pred CccHHHHHHHHHhcCCCccccccccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 045553 1013 GFNIVAWASMLLLQGRPCEFFTAGLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQ 1073 (1082)
Q Consensus 1013 ~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~ 1073 (1082)
.. + ..+..+... ..+...+..+.+++.+|++.||++||++.|++++
T Consensus 235 -~~---~--~~~~~~~~~---------~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h 280 (289)
T 1x8b_A 235 -DQ---W--HEIRQGRLP---------RIPQVLSQEFTELLKVMIHPDPERRPSAMALVKH 280 (289)
T ss_dssp -HH---H--HHHHTTCCC---------CCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHTC
T ss_pred -hH---H--HHHHcCCCC---------CCCcccCHHHHHHHHHHhCCCcccCCCHHHHhhC
Confidence 11 1 112222221 1223345689999999999999999999999864
No 207
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*
Probab=100.00 E-value=4.6e-36 Score=340.01 Aligned_cols=249 Identities=20% Similarity=0.287 Sum_probs=208.5
Q ss_pred hcCccccceecccCceEEEEEEEc-CCeEEEEEEeecCc---cccHHHHHHHHHHHhccCCCceeeEeeeeccCCeEEEE
Q 045553 800 TAGFNVQNCIGSGGFGATYKAEII-PGVVVAVKRLSVGR---FQGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFLI 875 (1082)
Q Consensus 800 ~~~~~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV 875 (1082)
..+|.+.+.||+|+||.||+|... +++.||+|++.... ....+.+.+|+.+++.++||||+++++++.+.+..++|
T Consensus 40 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 119 (335)
T 2owb_A 40 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVV 119 (335)
T ss_dssp TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred CCceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEE
Confidence 457999999999999999999765 47899999987542 23456788999999999999999999999999999999
Q ss_pred EeecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCCC
Q 045553 876 YNYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGTS 955 (1082)
Q Consensus 876 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~ 955 (1082)
|||+++++|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++......
T Consensus 120 ~e~~~~~~L~~~~~~~--~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~ 194 (335)
T 2owb_A 120 LELCRRRSLLELHKRR--KALTEPEARYYLRQIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYD 194 (335)
T ss_dssp ECCCTTCBHHHHHHHH--CSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTCCEEECCCTTCEECCST
T ss_pred EecCCCCCHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHC---CCEecCCCchhEEEcCCCCEEEeeccCceecccC
Confidence 9999999999998863 4689999999999999999999999 9999999999999999999999999999876533
Q ss_pred CCccccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCCCcccccc
Q 045553 956 ETHATTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQGRPCEFFTA 1035 (1082)
Q Consensus 956 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 1035 (1082)
.. ......|+..|+|||++.+..++.++||||||+++|||++|+.||... ...+......... .
T Consensus 195 ~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~--------~~~~~~~~~~~~~-~------ 258 (335)
T 2owb_A 195 GE-RKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETS--------CLKETYLRIKKNE-Y------ 258 (335)
T ss_dssp TC-CBCCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCCS--------SHHHHHHHHHHTC-C------
T ss_pred cc-cccccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCCC--------CHHHHHHHHhcCC-C------
Confidence 22 234457999999999999999999999999999999999999999632 1222222222211 1
Q ss_pred ccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 045553 1036 GLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQ 1073 (1082)
Q Consensus 1036 ~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~ 1073 (1082)
..+......+.+++.+|++.||++||++.|++++
T Consensus 259 ----~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~~ 292 (335)
T 2owb_A 259 ----SIPKHINPVAASLIQKMLQTDPTARPTINELLND 292 (335)
T ss_dssp ----CCCTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred ----CCCccCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 1122344578999999999999999999999874
No 208
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Probab=100.00 E-value=6.1e-36 Score=330.83 Aligned_cols=246 Identities=22% Similarity=0.328 Sum_probs=206.9
Q ss_pred hcCccccceecccCceEEEEEEEc-CCeEEEEEEeecCc---cccHHHHHHHHHHHhccCCCceeeEeeeeccCCeEEEE
Q 045553 800 TAGFNVQNCIGSGGFGATYKAEII-PGVVVAVKRLSVGR---FQGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFLI 875 (1082)
Q Consensus 800 ~~~~~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV 875 (1082)
.++|++.+.||+|+||.||+|... +++.||+|++.... ....+.+.+|++++++++||||+++++++.+.+..++|
T Consensus 13 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 92 (284)
T 2vgo_A 13 IDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLM 92 (284)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcCCEEEEE
Confidence 357999999999999999999765 57899999986532 23356789999999999999999999999999999999
Q ss_pred EeecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCCC
Q 045553 876 YNYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGTS 955 (1082)
Q Consensus 876 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~ 955 (1082)
|||+++++|.+++... ..+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||++......
T Consensus 93 ~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~ 167 (284)
T 2vgo_A 93 LEFAPRGELYKELQKH--GRFDEQRSATFMEELADALHYCHER---KVIHRDIKPENLLMGYKGELKIADFGWSVHAPSL 167 (284)
T ss_dssp ECCCTTEEHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECTTCCEEECCCTTCEECSSS
T ss_pred EEeCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEEcCCCCEEEecccccccCccc
Confidence 9999999999999874 4689999999999999999999999 9999999999999999999999999999765432
Q ss_pred CCccccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCCCcccccc
Q 045553 956 ETHATTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQGRPCEFFTA 1035 (1082)
Q Consensus 956 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 1035 (1082)
. .....|++.|+|||++.+..++.++||||+|+++|||++|+.||... ........... ...
T Consensus 168 ~---~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~--------~~~~~~~~~~~-~~~------ 229 (284)
T 2vgo_A 168 R---RRTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSP--------SHTETHRRIVN-VDL------ 229 (284)
T ss_dssp C---BCCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCS--------SHHHHHHHHHT-TCC------
T ss_pred c---cccccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCCC--------CHhHHHHHHhc-ccc------
Confidence 2 23457899999999999999999999999999999999999999632 11222222221 111
Q ss_pred ccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 045553 1036 GLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQ 1072 (1082)
Q Consensus 1036 ~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~ 1072 (1082)
..+...+..+.+++.+|++.+|++||++.|+++
T Consensus 230 ----~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~ 262 (284)
T 2vgo_A 230 ----KFPPFLSDGSKDLISKLLRYHPPQRLPLKGVME 262 (284)
T ss_dssp ----CCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred ----CCCCcCCHHHHHHHHHHhhcCHhhCCCHHHHhh
Confidence 123344568899999999999999999999986
No 209
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A
Probab=100.00 E-value=8.2e-37 Score=343.45 Aligned_cols=263 Identities=22% Similarity=0.256 Sum_probs=201.6
Q ss_pred hcCcccc-ceecccCceEEEEEEE-cCCeEEEEEEeecCccccHHHHHHHHHHHhcc-CCCceeeEeeeeccCCeEEEEE
Q 045553 800 TAGFNVQ-NCIGSGGFGATYKAEI-IPGVVVAVKRLSVGRFQGVQQFAAEIRTLGRV-QHPNLVTLIGYHVSEAEMFLIY 876 (1082)
Q Consensus 800 ~~~~~~~-~~lg~G~~g~Vy~a~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lV~ 876 (1082)
.+.|++. +.||+|+||.||+|.. .+++.||||++........+.+.+|++++.++ +||||+++++++.+.+..++||
T Consensus 11 ~~~y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~ 90 (316)
T 2ac3_A 11 EDVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVF 90 (316)
T ss_dssp TTSCEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECCSSCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred ceeEEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeCcchhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEE
Confidence 4568884 7899999999999964 46899999999876666678899999999884 7999999999999999999999
Q ss_pred eecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCc---EEEeecccceecC
Q 045553 877 NYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLN---AYLSDFGLARLLG 953 (1082)
Q Consensus 877 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~---~kl~DfGla~~~~ 953 (1082)
||+++++|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++. +||+|||++....
T Consensus 91 e~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~~~~ 165 (316)
T 2ac3_A 91 EKMRGGSILSHIHKR--RHFNELEASVVVQDVASALDFLHNK---GIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIK 165 (316)
T ss_dssp ECCTTCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEESCSSSSCSEEECCTTCCC---
T ss_pred EcCCCCcHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHhC---CceeCCCCHHHEEEccCCCcCceEEEEccCccccc
Confidence 999999999999874 4689999999999999999999999 9999999999999998776 9999999997654
Q ss_pred CCCC------ccccCcccCCCcccchhccc-----CCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCC---c---cH
Q 045553 954 TSET------HATTDVAGTFGYVAPEYAMT-----CRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNG---F---NI 1016 (1082)
Q Consensus 954 ~~~~------~~~~~~~gt~~y~aPE~~~~-----~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~---~---~~ 1016 (1082)
.... .......||+.|+|||++.+ ..++.++||||+||++|||++|+.||.......... . ..
T Consensus 166 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~ 245 (316)
T 2ac3_A 166 LNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPAC 245 (316)
T ss_dssp ----------------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCCSCSCC----CCHHH
T ss_pred cCCccccccccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCcccccccccccccccchhH
Confidence 2211 12223569999999999875 557889999999999999999999997543221000 0 00
Q ss_pred HHHHHHHHhcCCCccccccccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 045553 1017 VAWASMLLLQGRPCEFFTAGLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQ 1073 (1082)
Q Consensus 1017 ~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~ 1073 (1082)
.......+..+... ..+. . ....+..+.+++.+|++.||++||++.|++++
T Consensus 246 ~~~~~~~i~~~~~~-~~~~-~----~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~h 296 (316)
T 2ac3_A 246 QNMLFESIQEGKYE-FPDK-D----WAHISCAAKDLISKLLVRDAKQRLSAAQVLQH 296 (316)
T ss_dssp HHHHHHHHHHCCCC-CCHH-H----HTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred HHHHHHHHhccCcc-cCch-h----cccCCHHHHHHHHHHhhCChhhCCCHHHHhcC
Confidence 11111222222111 0000 0 01234679999999999999999999999874
No 210
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=100.00 E-value=8.1e-36 Score=355.59 Aligned_cols=176 Identities=22% Similarity=0.180 Sum_probs=88.7
Q ss_pred EEEcccCcccccCCcccccccccccEEEcccCccCCCCCccccCCCCccEEEccCCcCCCCcCccccCCCCCCEEeCCCC
Q 045553 186 VVSLSFNLLSGSVPEEFGDNCVSLEHILLAANSLTGSIPPSLGNCTELRSLLLSSNMLQGDIPSSFGQLVNLEVLDLSRN 265 (1082)
Q Consensus 186 ~L~L~~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N 265 (1082)
.++.+++.++ .+|..+. ++++.|+|++|++++..+..|.++++|++|+|++|.+++..|..|.++++|++|+|++|
T Consensus 15 ~v~c~~~~l~-~ip~~~~---~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n 90 (477)
T 2id5_A 15 AVLCHRKRFV-AVPEGIP---TETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSN 90 (477)
T ss_dssp EEECCSCCCS-SCCSCCC---TTCSEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSS
T ss_pred EEEeCCCCcC-cCCCCCC---CCCcEEECCCCccceECHhHccCCCCCCEEECCCCccCEeChhhhhCCccCCEEECCCC
Confidence 3444444444 4444432 34555555555555444555555555555555555555544555555555555555555
Q ss_pred cCcccCCccccCCCCCcEEEeccccCCcccccCCCCCCcccccCCCcccccCCCCCccccCCCCCcEEEcCCCcccCCCC
Q 045553 266 FLSGIVPSELGMCKQLKVLVLRNDYGPLYSREHGDLPIQPVVDGGEDYNFFDGGLPDSITRLPNLRVFWAPNLNLEGIFP 345 (1082)
Q Consensus 266 ~l~~~~p~~l~~l~~L~~L~l~~n~~~~~~~~~~~l~~~~~~~~~~~~n~~~~~~p~~l~~l~~L~~L~l~~n~l~~~~~ 345 (1082)
++++..+..|..+++|++|++++| .+.+..|..|..+++|++|++++|.+.++.+
T Consensus 91 ~l~~~~~~~~~~l~~L~~L~Ls~n-------------------------~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~ 145 (477)
T 2id5_A 91 RLKLIPLGVFTGLSNLTKLDISEN-------------------------KIVILLDYMFQDLYNLKSLEVGDNDLVYISH 145 (477)
T ss_dssp CCCSCCTTSSTTCTTCCEEECTTS-------------------------CCCEECTTTTTTCTTCCEEEECCTTCCEECT
T ss_pred cCCccCcccccCCCCCCEEECCCC-------------------------ccccCChhHccccccCCEEECCCCccceeCh
Confidence 555444444445555555554442 2222233344444444444444445544444
Q ss_pred cccccccCCCeEEcCCccccCCCCccccCCCCCCEEecCCCcCcc
Q 045553 346 QNWELCSKLEMLNLAHNFFTGQIPASLGNCKSLYFLDLSSNNLTG 390 (1082)
Q Consensus 346 ~~l~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~ 390 (1082)
..|..+++|++|+|++|++++..+..|.++++|+.|+|++|.+.+
T Consensus 146 ~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~ 190 (477)
T 2id5_A 146 RAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNINA 190 (477)
T ss_dssp TSSTTCTTCCEEEEESCCCSSCCHHHHTTCTTCCEEEEESCCCCE
T ss_pred hhccCCCCCCEEECCCCcCcccChhHhcccCCCcEEeCCCCcCcE
Confidence 455555555555555555554444445555555555555555543
No 211
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=100.00 E-value=1.6e-35 Score=343.36 Aligned_cols=136 Identities=21% Similarity=0.232 Sum_probs=93.3
Q ss_pred CCCCCCEEEcccCCCcccCChhhcCCCCCCEEeCcCCCCCCCCCccccCCCCCCeEEccCcccccccCccccCCCCCcEE
Q 045553 108 DLTQLRVLLLAFNGFSGELPLEIGQLSLLEILDLSFNSFHGPIPPTLQNCSSLRLINLSGNQFNGTIPAFFGQSPGFQVV 187 (1082)
Q Consensus 108 ~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 187 (1082)
.+.+|+.|++++|.++...+..|..+++|++|+|++|.+++..+..|.++++|++|+|++|++++..|..|+.+++|++|
T Consensus 43 ~l~~l~~l~l~~~~l~~l~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 122 (390)
T 3o6n_A 43 TLNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVL 122 (390)
T ss_dssp GGCCCSEEEEESCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEE
T ss_pred ccCCceEEEecCCchhhCChhHhcccccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEE
Confidence 36788899999988885444457888889999998888887667788888888888888888887777777777777777
Q ss_pred EcccCcccccCCcccccccccccEEEcccCccCCCCCccccCCCCccEEEccCCcCCCCcCccccCCCCCCEEeCCCCcC
Q 045553 188 SLSFNLLSGSVPEEFGDNCVSLEHILLAANSLTGSIPPSLGNCTELRSLLLSSNMLQGDIPSSFGQLVNLEVLDLSRNFL 267 (1082)
Q Consensus 188 ~L~~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l 267 (1082)
+|++|+++ .+|..+ |.++++|++|++++|++++..+..|..+++|++|++++|++
T Consensus 123 ~L~~n~l~-~l~~~~------------------------~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l 177 (390)
T 3o6n_A 123 VLERNDLS-SLPRGI------------------------FHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRL 177 (390)
T ss_dssp ECCSSCCC-CCCTTT------------------------TTTCTTCCEEECCSSCCCBCCTTTTSSCTTCCEEECCSSCC
T ss_pred ECCCCccC-cCCHHH------------------------hcCCCCCcEEECCCCccCccChhhccCCCCCCEEECCCCcC
Confidence 77777766 444433 33444455555555555444444455555555555555555
Q ss_pred c
Q 045553 268 S 268 (1082)
Q Consensus 268 ~ 268 (1082)
+
T Consensus 178 ~ 178 (390)
T 3o6n_A 178 T 178 (390)
T ss_dssp S
T ss_pred C
Confidence 4
No 212
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Probab=100.00 E-value=2.2e-35 Score=338.03 Aligned_cols=258 Identities=25% Similarity=0.381 Sum_probs=208.6
Q ss_pred HHHHHHhcCccccceecccCceEEEEEEEc-CCeEEEEEEeecCcc--------ccHHHHHHHHHHHhcc-CCCceeeEe
Q 045553 794 ENVVRATAGFNVQNCIGSGGFGATYKAEII-PGVVVAVKRLSVGRF--------QGVQQFAAEIRTLGRV-QHPNLVTLI 863 (1082)
Q Consensus 794 ~~~~~~~~~~~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~~--------~~~~~~~~e~~~l~~l-~h~niv~l~ 863 (1082)
.......++|++.+.||+|+||.||+|... +|+.||||++..... ...+.+.+|+++++++ +||||++++
T Consensus 87 ~~~~~~~~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~ 166 (365)
T 2y7j_A 87 AAAKEFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLI 166 (365)
T ss_dssp HHHHHHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEE
T ss_pred hhhhhhhhhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEE
Confidence 334455678999999999999999999875 699999999875431 1145678999999999 799999999
Q ss_pred eeeccCCeEEEEEeecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEE
Q 045553 864 GYHVSEAEMFLIYNYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYL 943 (1082)
Q Consensus 864 ~~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl 943 (1082)
+++......++||||+++++|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||
T Consensus 167 ~~~~~~~~~~lv~e~~~g~~L~~~l~~~--~~l~~~~~~~i~~qi~~~L~~LH~~---gi~H~Dlkp~NIl~~~~~~ikl 241 (365)
T 2y7j_A 167 DSYESSSFMFLVFDLMRKGELFDYLTEK--VALSEKETRSIMRSLLEAVSFLHAN---NIVHRDLKPENILLDDNMQIRL 241 (365)
T ss_dssp EEEEBSSEEEEEECCCTTCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEE
T ss_pred EEEeeCCEEEEEEEeCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEE
Confidence 9999999999999999999999999863 4689999999999999999999999 9999999999999999999999
Q ss_pred eecccceecCCCCCccccCcccCCCcccchhccc------CCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHH
Q 045553 944 SDFGLARLLGTSETHATTDVAGTFGYVAPEYAMT------CRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIV 1017 (1082)
Q Consensus 944 ~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~------~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~ 1017 (1082)
+|||++..+.... ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||... ...
T Consensus 242 ~DfG~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~--------~~~ 311 (365)
T 2y7j_A 242 SDFGFSCHLEPGE--KLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHR--------RQI 311 (365)
T ss_dssp CCCTTCEECCTTC--CBCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCS--------SHH
T ss_pred EecCcccccCCCc--ccccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCCC--------CHH
Confidence 9999998775432 2344679999999999863 35788999999999999999999999632 112
Q ss_pred HHHHHHHhcCCCccccccccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 045553 1018 AWASMLLLQGRPCEFFTAGLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQ 1073 (1082)
Q Consensus 1018 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~ 1073 (1082)
....... .+..... .+ .. ...+..+.+++.+|++.||++||++.|++++
T Consensus 312 ~~~~~i~-~~~~~~~-~~-~~----~~~~~~~~~li~~~L~~dP~~Rps~~ell~h 360 (365)
T 2y7j_A 312 LMLRMIM-EGQYQFS-SP-EW----DDRSSTVKDLISRLLQVDPEARLTAEQALQH 360 (365)
T ss_dssp HHHHHHH-HTCCCCC-HH-HH----SSSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred HHHHHHH-hCCCCCC-Cc-cc----ccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 2222222 2211100 00 00 1224578999999999999999999999874
No 213
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*
Probab=100.00 E-value=8.1e-36 Score=328.34 Aligned_cols=248 Identities=25% Similarity=0.412 Sum_probs=199.4
Q ss_pred hcCccccceecccCceEEEEEEEc-CCeEEEEEEeecCc---cccHHHHHHHHHHHhccCCCceeeEeeeeccCCeEEEE
Q 045553 800 TAGFNVQNCIGSGGFGATYKAEII-PGVVVAVKRLSVGR---FQGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFLI 875 (1082)
Q Consensus 800 ~~~~~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV 875 (1082)
.++|++.+.||+|+||.||+|... +|+.||||++.... ....+.+.+|+++++.++||||+++++++.+.+..++|
T Consensus 10 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 89 (276)
T 2h6d_A 10 IGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMV 89 (276)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred eccEEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCeEEEE
Confidence 357999999999999999999765 68999999986542 23456789999999999999999999999999999999
Q ss_pred EeecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCCC
Q 045553 876 YNYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGTS 955 (1082)
Q Consensus 876 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~ 955 (1082)
|||+++++|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||.+......
T Consensus 90 ~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~ 164 (276)
T 2h6d_A 90 MEYVSGGELFDYICKH--GRVEEMEARRLFQQILSAVDYCHRH---MVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDG 164 (276)
T ss_dssp EECCCSCBHHHHHHHH--CSCCHHHHHHHHHHHHHHHHHHHHH---CSSCCCCCGGGEEECTTSCEEECCCCGGGCCCC-
T ss_pred EeccCCCcHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCChhhEEECCCCCEEEeecccccccCCC
Confidence 9999999999999874 4689999999999999999999999 9999999999999999999999999999876433
Q ss_pred CCccccCcccCCCcccchhcccCCC-CchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCCCccccc
Q 045553 956 ETHATTDVAGTFGYVAPEYAMTCRV-SDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQGRPCEFFT 1034 (1082)
Q Consensus 956 ~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 1034 (1082)
. ......|++.|+|||.+.+..+ +.++||||+|+++|||++|+.||+.. .......... .+..
T Consensus 165 ~--~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~--------~~~~~~~~~~-~~~~----- 228 (276)
T 2h6d_A 165 E--FLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDE--------HVPTLFKKIR-GGVF----- 228 (276)
T ss_dssp --------------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCS--------SHHHHHHHHH-HCCC-----
T ss_pred c--ceecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCC--------cHHHHHHHhh-cCcc-----
Confidence 2 2234568999999999988765 68999999999999999999999642 1222222222 2111
Q ss_pred cccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 045553 1035 AGLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQ 1073 (1082)
Q Consensus 1035 ~~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~ 1073 (1082)
..+......+.+++.+|++.||++||++.|++++
T Consensus 229 -----~~~~~~~~~l~~li~~~l~~~p~~Rps~~~~l~h 262 (276)
T 2h6d_A 229 -----YIPEYLNRSVATLLMHMLQVDPLKRATIKDIREH 262 (276)
T ss_dssp -----CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred -----cCchhcCHHHHHHHHHHccCChhhCCCHHHHHhC
Confidence 1123345678999999999999999999999875
No 214
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*
Probab=100.00 E-value=1.7e-36 Score=342.55 Aligned_cols=260 Identities=22% Similarity=0.304 Sum_probs=195.3
Q ss_pred HhcCccccceecccCceEEEEEEE-cCCeEEEEEEeecCcc--ccHHHHHHHHHHHhccCCCceeeEeeeeccCCeEEEE
Q 045553 799 ATAGFNVQNCIGSGGFGATYKAEI-IPGVVVAVKRLSVGRF--QGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFLI 875 (1082)
Q Consensus 799 ~~~~~~~~~~lg~G~~g~Vy~a~~-~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV 875 (1082)
..++|++.+.||+|+||+||+|.. .+++.||||++..... ...+.+.+|++++++++||||+++++++.+....++|
T Consensus 32 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 111 (329)
T 3gbz_A 32 SIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHHNHRLHLI 111 (329)
T ss_dssp CGGGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEEETTEEEEE
T ss_pred chhhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEecCCEEEEE
Confidence 356799999999999999999964 4689999999975433 2245678999999999999999999999999999999
Q ss_pred EeecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEc-----CCCcEEEeecccce
Q 045553 876 YNYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLD-----NNLNAYLSDFGLAR 950 (1082)
Q Consensus 876 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~-----~~~~~kl~DfGla~ 950 (1082)
|||++ |+|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+||+++ .++.+||+|||+++
T Consensus 112 ~e~~~-~~L~~~~~~~--~~~~~~~~~~i~~ql~~~l~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg~a~ 185 (329)
T 3gbz_A 112 FEYAE-NDLKKYMDKN--PDVSMRVIKSFLYQLINGVNFCHSR---RCLHRDLKPQNLLLSVSDASETPVLKIGDFGLAR 185 (329)
T ss_dssp EECCS-EEHHHHHHHC--TTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEC-----CCEEEECCTTHHH
T ss_pred EecCC-CCHHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHHhC---CEECCCCCHHHEEEecCCCCccceEEECcCCCcc
Confidence 99996 5999999875 3589999999999999999999999 999999999999994 55569999999998
Q ss_pred ecCCCCCccccCcccCCCcccchhcccC-CCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHh-cCC
Q 045553 951 LLGTSETHATTDVAGTFGYVAPEYAMTC-RVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLL-QGR 1028 (1082)
Q Consensus 951 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~-~~~ 1028 (1082)
....... ......||+.|+|||++.+. .++.++||||+||++|||++|+.||.... ..+....... .+.
T Consensus 186 ~~~~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~--------~~~~~~~~~~~~~~ 256 (329)
T 3gbz_A 186 AFGIPIR-QFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDS--------EIDQLFKIFEVLGL 256 (329)
T ss_dssp HHC------------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCSS--------HHHHHHHHHHHHCC
T ss_pred ccCCccc-ccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCCC--------HHHHHHHHHHHhCC
Confidence 7653322 23345689999999999874 48999999999999999999999996421 1111222111 111
Q ss_pred Cccc-c----c--------cccCCC-----CChHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 045553 1029 PCEF-F----T--------AGLWDC-----GPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQ 1073 (1082)
Q Consensus 1029 ~~~~-~----d--------~~l~~~-----~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~ 1073 (1082)
.... . . +..... .+.....++.+++.+|++.||++|||+.|++++
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 319 (329)
T 3gbz_A 257 PDDTTWPGVTALPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALEH 319 (329)
T ss_dssp CCTTTSTTGGGSTTCCTTCCCCCCCCHHHHHGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred CchhhhhhhhhhhhhhhhhhhhccccHhhhcccccCHHHHHHHHHHccCChhhCCCHHHHhCC
Confidence 0000 0 0 000000 011134678999999999999999999999863
No 215
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...
Probab=100.00 E-value=5.1e-36 Score=343.52 Aligned_cols=258 Identities=23% Similarity=0.380 Sum_probs=204.5
Q ss_pred hcCccccceecccCceEEEEEEEc-CCeEEEEEEeecCc-cccHHHHHHHHHHHhccCCCceeeEeeeeccCCeEEEEEe
Q 045553 800 TAGFNVQNCIGSGGFGATYKAEII-PGVVVAVKRLSVGR-FQGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFLIYN 877 (1082)
Q Consensus 800 ~~~~~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~E 877 (1082)
.++|++.+.||+|+||.||+|... ++..||+|++.... ....+.+.+|++++++++||||+++++++.+.+..++|||
T Consensus 32 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 111 (360)
T 3eqc_A 32 DDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICME 111 (360)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETTEEEEEEC
T ss_pred cccceeeeeecCCCCeEEEEEEECCCCcEEEEEEeccccCHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECCEEEEEEE
Confidence 356999999999999999999765 68999999997653 3445678999999999999999999999999999999999
Q ss_pred ecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCCCCC
Q 045553 878 YLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGTSET 957 (1082)
Q Consensus 878 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~ 957 (1082)
|+++++|.+++... ..+++..+..++.|++.||+|||+.+ +|+||||||+||+++.++.+||+|||++......
T Consensus 112 ~~~~~~L~~~l~~~--~~~~~~~~~~i~~~i~~~l~~lh~~~--~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~-- 185 (360)
T 3eqc_A 112 HMDGGSLDQVLKKA--GRIPEQILGKVSIAVIKGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS-- 185 (360)
T ss_dssp CCTTCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHHH--CCCCSCCSGGGEEECTTCCEEECCCCCCHHHHHH--
T ss_pred CCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHhC--CEEcCCccHHHEEECCCCCEEEEECCCCcccccc--
Confidence 99999999999874 46899999999999999999999832 7999999999999999999999999999755322
Q ss_pred ccccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHhCCCCCCCCccCC---------------------------
Q 045553 958 HATTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELISDKKALDPSFCSF--------------------------- 1010 (1082)
Q Consensus 958 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~--------------------------- 1010 (1082)
......||+.|+|||++.+..++.++||||||+++|||++|+.||.......
T Consensus 186 -~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (360)
T 3eqc_A 186 -MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPL 264 (360)
T ss_dssp -C----CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSSCCCHHHHHHHHC---------------------
T ss_pred -cccCCCCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccCCCCCCCcccCCCcc
Confidence 2234578999999999999999999999999999999999999997432100
Q ss_pred -------CCCccHHHHHHHHHhcCCCccccccccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 045553 1011 -------GNGFNIVAWASMLLLQGRPCEFFTAGLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQ 1073 (1082)
Q Consensus 1011 -------~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~ 1073 (1082)
................. . ....+...+.++.+++.+|++.||++|||+.|++++
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~-~--------~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 325 (360)
T 3eqc_A 265 NKFGMDSRPPMAIFELLDYIVNEP-P--------PKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVH 325 (360)
T ss_dssp ---------CCCHHHHHHHHHHSC-C--------CCCCTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred cccccCCCCcccchhhhhHHhccC-C--------CCCCcccccHHHHHHHHHHhhcChhhCCCHHHHhhC
Confidence 00000000111110000 0 000112235679999999999999999999999864
No 216
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*
Probab=100.00 E-value=1.3e-35 Score=331.45 Aligned_cols=249 Identities=23% Similarity=0.399 Sum_probs=208.9
Q ss_pred hcCccccceecccCceEEEEEEE-cCCeEEEEEEeecCc-cccHHHHHHHHHHHhccCCCceeeEeeeeccCCeEEEEEe
Q 045553 800 TAGFNVQNCIGSGGFGATYKAEI-IPGVVVAVKRLSVGR-FQGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFLIYN 877 (1082)
Q Consensus 800 ~~~~~~~~~lg~G~~g~Vy~a~~-~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~E 877 (1082)
...|++.+.||+|+||.||+|.. .+++.||||++.... ....+.+.+|+.++++++||||+++++++.+....++|||
T Consensus 21 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 100 (303)
T 3a7i_A 21 EELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIME 100 (303)
T ss_dssp GGTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCSTTHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred HHHHHHhhhhcccCCeEEEEEEECCCCcEEEEEEecccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEE
Confidence 45699999999999999999965 468999999997653 3456789999999999999999999999999999999999
Q ss_pred ecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCCCCC
Q 045553 878 YLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGTSET 957 (1082)
Q Consensus 878 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~ 957 (1082)
|+++++|.+++.. ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||.+........
T Consensus 101 ~~~~~~L~~~~~~---~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 174 (303)
T 3a7i_A 101 YLGGGSALDLLEP---GPLDETQIATILREILKGLDYLHSE---KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQI 174 (303)
T ss_dssp CCTTEEHHHHHTT---SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECBTTBC
T ss_pred eCCCCcHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCChheEEECCCCCEEEeecccceecCcccc
Confidence 9999999999975 4689999999999999999999999 999999999999999999999999999987654322
Q ss_pred ccccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCCCcccccccc
Q 045553 958 HATTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQGRPCEFFTAGL 1037 (1082)
Q Consensus 958 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 1037 (1082)
......|++.|+|||++.+..++.++||||||+++|||++|+.||... .......... .+...
T Consensus 175 -~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~--------~~~~~~~~~~-~~~~~------- 237 (303)
T 3a7i_A 175 -KRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSEL--------HPMKVLFLIP-KNNPP------- 237 (303)
T ss_dssp -CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTS--------CHHHHHHHHH-HSCCC-------
T ss_pred -ccCccCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCCc--------CHHHHHHHhh-cCCCC-------
Confidence 234457899999999999999999999999999999999999998632 1122222221 22111
Q ss_pred CCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 045553 1038 WDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQ 1073 (1082)
Q Consensus 1038 ~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~ 1073 (1082)
..+...+..+.+++.+|++.+|++||++.|++++
T Consensus 238 --~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~ 271 (303)
T 3a7i_A 238 --TLEGNYSKPLKEFVEACLNKEPSFRPTAKELLKH 271 (303)
T ss_dssp --CCCSSCCHHHHHHHHHHCCSSGGGSCCHHHHTTC
T ss_pred --CCccccCHHHHHHHHHHcCCChhhCcCHHHHhhC
Confidence 1122334679999999999999999999999875
No 217
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}
Probab=100.00 E-value=1.1e-35 Score=350.49 Aligned_cols=260 Identities=21% Similarity=0.295 Sum_probs=207.5
Q ss_pred hcCccccceecccCceEEEEEEE-cCCeEEEEEEeecCccccHHHHHHHHHHHhccCC-CceeeEeeeeccCCeEEEEEe
Q 045553 800 TAGFNVQNCIGSGGFGATYKAEI-IPGVVVAVKRLSVGRFQGVQQFAAEIRTLGRVQH-PNLVTLIGYHVSEAEMFLIYN 877 (1082)
Q Consensus 800 ~~~~~~~~~lg~G~~g~Vy~a~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h-~niv~l~~~~~~~~~~~lV~E 877 (1082)
.++|++.++||+|+||.||+|.. .+++.||||++...... .++.+|+++++.++| +++..+..++...+..++|||
T Consensus 6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~~--~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~lvme 83 (483)
T 3sv0_A 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKH--PQLLYESKIYRILQGGTGIPNVRWFGVEGDYNVLVMD 83 (483)
T ss_dssp TTTEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTCSS--CCHHHHHHHHHHTTTSTTCCCEEEEEEETTEEEEEEE
T ss_pred CCcEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEecccccc--HHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEEEEEE
Confidence 46899999999999999999975 56899999988755332 357889999999987 556666667777888999999
Q ss_pred ecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEE---cCCCcEEEeecccceecCC
Q 045553 878 YLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILL---DNNLNAYLSDFGLARLLGT 954 (1082)
Q Consensus 878 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill---~~~~~~kl~DfGla~~~~~ 954 (1082)
|+ +++|.+++... ...+++..++.|+.||+.||+|||+. +|+||||||+|||+ +.++.+||+|||+++.+..
T Consensus 84 ~~-g~sL~~ll~~~-~~~l~~~~~~~i~~qi~~aL~yLH~~---gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~ 158 (483)
T 3sv0_A 84 LL-GPSLEDLFNFC-SRKLSLKTVLMLADQMINRVEFVHSK---SFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRD 158 (483)
T ss_dssp CC-CCBHHHHHHHT-TTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECCGGGTTCEEECCCTTCEECBC
T ss_pred CC-CCCHHHHHHhh-cCCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccCcceEEEecCCCCCeEEEEeCCcceeccC
Confidence 99 99999999865 45699999999999999999999999 99999999999999 6889999999999998754
Q ss_pred CCCc------cccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCC
Q 045553 955 SETH------ATTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQGR 1028 (1082)
Q Consensus 955 ~~~~------~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 1028 (1082)
.... ......||..|+|||++.+..++.++|||||||++|||++|+.||...... ...+.+.......
T Consensus 159 ~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~-----~~~~~~~~i~~~~- 232 (483)
T 3sv0_A 159 TSTHQHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAG-----TKKQKYEKISEKK- 232 (483)
T ss_dssp TTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCS-----SHHHHHHHHHHHH-
T ss_pred CccccccccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccch-----hHHHHHHHHhhcc-
Confidence 4332 123567999999999999999999999999999999999999999753221 1112111111110
Q ss_pred CccccccccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhh
Q 045553 1029 PCEFFTAGLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQLKQI 1077 (1082)
Q Consensus 1029 ~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L~~i 1077 (1082)
....++ .+ ....+.++.+++.+||+.+|++||++.+|++.|+++
T Consensus 233 ~~~~~~-~l----~~~~p~~l~~li~~cl~~dP~~RPs~~el~~~L~~l 276 (483)
T 3sv0_A 233 VATSIE-AL----CRGYPTEFASYFHYCRSLRFDDKPDYSYLKRLFRDL 276 (483)
T ss_dssp HHSCHH-HH----HTTSCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHH
T ss_pred ccccHH-HH----hcCCcHHHHHHHHHHhcCChhhCcCHHHHHHHHHHH
Confidence 000000 00 012346899999999999999999999999999876
No 218
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Probab=100.00 E-value=3.9e-36 Score=335.56 Aligned_cols=254 Identities=22% Similarity=0.407 Sum_probs=203.8
Q ss_pred HhcCccccceecccCceEEEEEEEc-CCeEEEEEEeecCccccHHHHHHHHHHHhccCCCceeeEeeeeccCCeEEEEEe
Q 045553 799 ATAGFNVQNCIGSGGFGATYKAEII-PGVVVAVKRLSVGRFQGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFLIYN 877 (1082)
Q Consensus 799 ~~~~~~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~E 877 (1082)
..++|++.+.||+|+||.||+|... +++.||+|++........+.+.+|++++++++||||+++++++...+..++|||
T Consensus 17 ~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 96 (302)
T 2j7t_A 17 PNEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIE 96 (302)
T ss_dssp GGGTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC----CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC-CEEEEEE
T ss_pred CccceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCCCHHHHHHHHHHHHHHhcCCCCCEeeeeeeeeeCCeEEEEEE
Confidence 4568999999999999999999775 589999999987766677889999999999999999999999999999999999
Q ss_pred ecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCCCCC
Q 045553 878 YLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGTSET 957 (1082)
Q Consensus 878 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~ 957 (1082)
|+++++|.+++... ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++.......
T Consensus 97 ~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~- 171 (302)
T 2j7t_A 97 FCPGGAVDAIMLEL-DRGLTEPQIQVVCRQMLEALNFLHSK---RIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTL- 171 (302)
T ss_dssp CCTTEEHHHHHHHH-TSCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTSCEEECCCHHHHHHHHHH-
T ss_pred eCCCCcHHHHHHhh-ccCCCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCHHHEEECCCCCEEEEECCCCccccccc-
Confidence 99999999998764 35689999999999999999999999 99999999999999999999999999875432111
Q ss_pred ccccCcccCCCcccchhc-----ccCCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCCCccc
Q 045553 958 HATTDVAGTFGYVAPEYA-----MTCRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQGRPCEF 1032 (1082)
Q Consensus 958 ~~~~~~~gt~~y~aPE~~-----~~~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1032 (1082)
.......|++.|+|||++ .+..++.++||||||+++|||++|+.||... ............. ....
T Consensus 172 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~--------~~~~~~~~~~~~~-~~~~ 242 (302)
T 2j7t_A 172 QKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHEL--------NPMRVLLKIAKSD-PPTL 242 (302)
T ss_dssp HC-----CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTS--------CHHHHHHHHHHSC-CCCC
T ss_pred cccccccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccC--------CHHHHHHHHhccC-Cccc
Confidence 112335689999999998 3667899999999999999999999998732 2222223322222 1111
Q ss_pred cccccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 045553 1033 FTAGLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQ 1073 (1082)
Q Consensus 1033 ~d~~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~ 1073 (1082)
..+...+..+.+++.+|++.+|++||++.|++++
T Consensus 243 -------~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h 276 (302)
T 2j7t_A 243 -------LTPSKWSVEFRDFLKIALDKNPETRPSAAQLLEH 276 (302)
T ss_dssp -------SSGGGSCHHHHHHHHHHSCSCTTTSCCHHHHTTS
T ss_pred -------CCccccCHHHHHHHHHHcccChhhCCCHHHHhcC
Confidence 1123445689999999999999999999999763
No 219
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Probab=100.00 E-value=1.4e-35 Score=330.49 Aligned_cols=260 Identities=26% Similarity=0.392 Sum_probs=204.3
Q ss_pred cCccccceecccCceEEEEEEEc-CCeEEEEEEeecCcc--ccHHHHHHHHHHHhccCCCceeeEeeeeccCCeEEEEEe
Q 045553 801 AGFNVQNCIGSGGFGATYKAEII-PGVVVAVKRLSVGRF--QGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFLIYN 877 (1082)
Q Consensus 801 ~~~~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~E 877 (1082)
++|++.+.||+|+||.||+|... +|+.||||++..... ...+.+.+|++++++++||||+++++++...+..++|||
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 82 (299)
T 2r3i_A 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFE 82 (299)
T ss_dssp TTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC--------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred chhhhhhhhccCCCeeEEEEEEcCCCceEEEEEeecCccchhhHHHHHHHHHHHHHcCCCCeeeEEEEEecCCceEEEEE
Confidence 57999999999999999999765 689999999865432 234678899999999999999999999999999999999
Q ss_pred ecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCCCCC
Q 045553 878 YLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGTSET 957 (1082)
Q Consensus 878 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~ 957 (1082)
|++ ++|.+++.......+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||.+........
T Consensus 83 ~~~-~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~ 158 (299)
T 2r3i_A 83 FLH-QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR 158 (299)
T ss_dssp CCS-EEHHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECSTTHHHHHCCCSB
T ss_pred ccc-CCHHHHHHhhhccCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHeEEcCCCCEEECcchhhhhccCCcc
Confidence 996 6999999887666799999999999999999999999 999999999999999999999999999987653322
Q ss_pred ccccCcccCCCcccchhcccCC-CCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCCCccccccc
Q 045553 958 HATTDVAGTFGYVAPEYAMTCR-VSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQGRPCEFFTAG 1036 (1082)
Q Consensus 958 ~~~~~~~gt~~y~aPE~~~~~~-~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 1036 (1082)
......|++.|+|||++.+.. ++.++||||||+++|||++|+.||.... ............+...+..-+.
T Consensus 159 -~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~-------~~~~~~~~~~~~~~~~~~~~~~ 230 (299)
T 2r3i_A 159 -TYTHEVVTLWYRAPEILLGAKYYSTAVDIWSLGCIFAEMVTRRALFPGDS-------EIDQLFRIFRTLGTPDEVVWPG 230 (299)
T ss_dssp -CTTSCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSS-------HHHHHHHHHHHHCCCCTTTSTT
T ss_pred -ccCcccccccccCcHHhhccccCChHHHHHHHHHHHHHHHhCCCCCCCcc-------HHHHHHHHHHHhCCCchhhhhH
Confidence 223456899999999998765 7999999999999999999999997421 1111111111111111110000
Q ss_pred ------cCCCC-----------ChHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 045553 1037 ------LWDCG-----------PHDDLIEMLNLAIMCTGESLSSRPSMRQVAQ 1072 (1082)
Q Consensus 1037 ------l~~~~-----------~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~ 1072 (1082)
..... ....+.++.+++.+|++.||++|||+.|+++
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~~l~ 283 (299)
T 2r3i_A 231 VTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 283 (299)
T ss_dssp GGGSTTCCTTSCCCCCCCHHHHSTTCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred hhcCcccchhhhcccchhhHhhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence 00000 0123467899999999999999999999987
No 220
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}
Probab=100.00 E-value=1.9e-35 Score=330.59 Aligned_cols=251 Identities=23% Similarity=0.321 Sum_probs=203.8
Q ss_pred hcCccccceecccCceEEEEEEE-cCCeEEEEEEeecCc----cccHHHHHHHHHHHhccCCCceeeEeeeec--cCCeE
Q 045553 800 TAGFNVQNCIGSGGFGATYKAEI-IPGVVVAVKRLSVGR----FQGVQQFAAEIRTLGRVQHPNLVTLIGYHV--SEAEM 872 (1082)
Q Consensus 800 ~~~~~~~~~lg~G~~g~Vy~a~~-~~~~~vavK~~~~~~----~~~~~~~~~e~~~l~~l~h~niv~l~~~~~--~~~~~ 872 (1082)
.++|++.+.||+|+||.||+|.. .+++.||+|++.... ....+.+.+|++++++++||||+++++++. +....
T Consensus 4 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 83 (305)
T 2wtk_C 4 IGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKM 83 (305)
T ss_dssp -CCBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC---CE
T ss_pred ccceeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCCeE
Confidence 46899999999999999999975 468899999997542 234577899999999999999999999884 45688
Q ss_pred EEEEeecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceec
Q 045553 873 FLIYNYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLL 952 (1082)
Q Consensus 873 ~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~ 952 (1082)
++||||++++ +.+++.......+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||.+...
T Consensus 84 ~lv~e~~~~~-l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~---~i~H~dlkp~NIl~~~~~~~kl~dfg~~~~~ 159 (305)
T 2wtk_C 84 YMVMEYCVCG-MQEMLDSVPEKRFPVCQAHGYFCQLIDGLEYLHSQ---GIVHKDIKPGNLLLTTGGTLKISALGVAEAL 159 (305)
T ss_dssp EEEEECCSEE-HHHHHHHSTTCSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTCEEC
T ss_pred EEEehhccCC-HHHHHHhCcccccCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCcccEEEcCCCcEEeecccccccc
Confidence 9999999765 88888876677899999999999999999999999 9999999999999999999999999999876
Q ss_pred CCCCC-ccccCcccCCCcccchhcccCC--CCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCCC
Q 045553 953 GTSET-HATTDVAGTFGYVAPEYAMTCR--VSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQGRP 1029 (1082)
Q Consensus 953 ~~~~~-~~~~~~~gt~~y~aPE~~~~~~--~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1029 (1082)
..... .......|++.|+|||++.+.. ++.++||||+|+++|||++|+.||... ...+....... +..
T Consensus 160 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~--------~~~~~~~~i~~-~~~ 230 (305)
T 2wtk_C 160 HPFAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGD--------NIYKLFENIGK-GSY 230 (305)
T ss_dssp CTTCSSCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCS--------SHHHHHHHHHH-CCC
T ss_pred CccccccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCc--------hHHHHHHHHhc-CCC
Confidence 53222 2233456899999999998654 378999999999999999999999732 22233332222 211
Q ss_pred ccccccccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 045553 1030 CEFFTAGLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQ 1073 (1082)
Q Consensus 1030 ~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~ 1073 (1082)
..+......+.+++.+|++.||++||++.|++++
T Consensus 231 ----------~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~ 264 (305)
T 2wtk_C 231 ----------AIPGDCGPPLSDLLKGMLEYEPAKRFSIRQIRQH 264 (305)
T ss_dssp ----------CCCSSSCHHHHHHHHHHTCSSTTTSCCHHHHHHS
T ss_pred ----------CCCCccCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 1123345688999999999999999999999975
No 221
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}
Probab=100.00 E-value=3.2e-36 Score=339.60 Aligned_cols=260 Identities=22% Similarity=0.313 Sum_probs=197.1
Q ss_pred cCccccceecccCceEEEEEEEc-CCeEEEEEEeecCcccc-HHHHHHHHHHHhccCCCceeeEeeeeccCCeEEEEEee
Q 045553 801 AGFNVQNCIGSGGFGATYKAEII-PGVVVAVKRLSVGRFQG-VQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFLIYNY 878 (1082)
Q Consensus 801 ~~~~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~~~~-~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~ 878 (1082)
++|++.+.||+|+||+||+|... +++.||||++....... ...+.+|++++++++||||+++++++.+.+..++||||
T Consensus 2 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 81 (324)
T 3mtl_A 2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEY 81 (324)
T ss_dssp CSEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC------CCCCCCCHHHHSCCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred CceEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEecccccccchhHHHHHHHHHhcCCCCCCeeeeEEeeCCEEEEEecc
Confidence 47999999999999999999765 68999999986543221 12355799999999999999999999999999999999
Q ss_pred cCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCCCCCc
Q 045553 879 LPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGTSETH 958 (1082)
Q Consensus 879 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~ 958 (1082)
++ |+|.+++... ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.......
T Consensus 82 ~~-~~l~~~~~~~-~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~- 155 (324)
T 3mtl_A 82 LD-KDLKQYLDDC-GNIINMHNVKLFLFQLLRGLAYCHRQ---KVLHRDLKPQNLLINERGELKLADFGLARAKSIPTK- 155 (324)
T ss_dssp CS-EEHHHHHHHT-TTCCCHHHHHHHHHHHHHHHHHHHHT---TEEESSCCGGGEEECTTCCEEECSSSEEECC------
T ss_pred cc-cCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCcCHHHEEECCCCCEEEccCcccccccCCcc-
Confidence 96 6999999875 45689999999999999999999999 999999999999999999999999999986543322
Q ss_pred cccCcccCCCcccchhccc-CCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCCCcccccccc
Q 045553 959 ATTDVAGTFGYVAPEYAMT-CRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQGRPCEFFTAGL 1037 (1082)
Q Consensus 959 ~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 1037 (1082)
......||+.|+|||++.+ ..++.++||||+||++|||++|+.||.... .......+........ .+......
T Consensus 156 ~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~-----~~~~~~~i~~~~~~~~-~~~~~~~~ 229 (324)
T 3mtl_A 156 TYDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGST-----VEEQLHFIFRILGTPT-EETWPGIL 229 (324)
T ss_dssp -------CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSS-----HHHHHHHHHHHHCCCC-TTTSTTGG
T ss_pred ccccccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC-----HHHHHHHHHHHhCCCC-hHhchhhh
Confidence 2334578999999999876 568999999999999999999999997432 1122222222221111 11100000
Q ss_pred -------------CC----CCChHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 045553 1038 -------------WD----CGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQ 1072 (1082)
Q Consensus 1038 -------------~~----~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~ 1072 (1082)
.. ........++.+++.+|++.||++|||+.|+++
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 281 (324)
T 3mtl_A 230 SNEEFKTYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMK 281 (324)
T ss_dssp GCHHHHHTCCCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred cchhhcccccccccchhhhhhcCCCCHHHHHHHHHHcCcCcccCCCHHHHhc
Confidence 00 001233567899999999999999999999986
No 222
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Probab=100.00 E-value=5.7e-36 Score=354.52 Aligned_cols=194 Identities=24% Similarity=0.426 Sum_probs=155.9
Q ss_pred hcCccccceecccCceEEEEEEEc-CCeEEEEEEeecC--ccccHHHHHHHHHHHhccCCCceeeEeeeecc-----CCe
Q 045553 800 TAGFNVQNCIGSGGFGATYKAEII-PGVVVAVKRLSVG--RFQGVQQFAAEIRTLGRVQHPNLVTLIGYHVS-----EAE 871 (1082)
Q Consensus 800 ~~~~~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~-----~~~ 871 (1082)
.++|++.+.||+|+||+||+|... +++.||||++... .....+.+.+|++++++++||||+++++++.. ...
T Consensus 52 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 131 (458)
T 3rp9_A 52 PDRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDE 131 (458)
T ss_dssp CTTEEECCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCC
T ss_pred CCCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCce
Confidence 467999999999999999999644 6899999998653 23445778999999999999999999999843 357
Q ss_pred EEEEEeecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeeccccee
Q 045553 872 MFLIYNYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARL 951 (1082)
Q Consensus 872 ~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~ 951 (1082)
.|+||||+ +++|.+++.. ...+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++.
T Consensus 132 ~~lv~e~~-~~~L~~~~~~--~~~l~~~~~~~~~~qi~~aL~~LH~~---~iiHrDlKp~NILl~~~~~~kl~DFGla~~ 205 (458)
T 3rp9_A 132 LYVVLEIA-DSDFKKLFRT--PVYLTELHIKTLLYNLLVGVKYVHSA---GILHRDLKPANCLVNQDCSVKVCDFGLART 205 (458)
T ss_dssp EEEEECCC-SEEHHHHHHS--SCCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTCCEEECCCTTCBC
T ss_pred EEEEEecc-ccchhhhccc--CCCCCHHHHHHHHHHHHHHHHHHHhC---CcCCCCCChhhEEECCCCCEeecccccchh
Confidence 89999998 6799999986 35699999999999999999999999 999999999999999999999999999987
Q ss_pred cCCCCC--------------------------ccccCcccCCCcccchhc-ccCCCCchhhHHHHHHHHHHHHhC
Q 045553 952 LGTSET--------------------------HATTDVAGTFGYVAPEYA-MTCRVSDKADVYSFGVVLLELISD 999 (1082)
Q Consensus 952 ~~~~~~--------------------------~~~~~~~gt~~y~aPE~~-~~~~~~~~~Dv~slGvll~elltg 999 (1082)
...... ......+||+.|+|||++ .+..++.++|||||||++|||++|
T Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~elltg 280 (458)
T 3rp9_A 206 VDYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNM 280 (458)
T ss_dssp TTSCTTCCCCCC---------------------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHTT
T ss_pred ccCccccccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHHHHh
Confidence 653221 123456789999999986 456799999999999999999994
No 223
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=7.1e-36 Score=340.08 Aligned_cols=262 Identities=25% Similarity=0.359 Sum_probs=199.4
Q ss_pred HHhcCccccceecccCceEEEEEEEc-CCeEEEEEEeecCcccc-----HHHHHHHHHHHhccCCCceeeEeeeeccCCe
Q 045553 798 RATAGFNVQNCIGSGGFGATYKAEII-PGVVVAVKRLSVGRFQG-----VQQFAAEIRTLGRVQHPNLVTLIGYHVSEAE 871 (1082)
Q Consensus 798 ~~~~~~~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~~~~-----~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~ 871 (1082)
...++|++.+.||+|+||.||+|... +|+.||||++....... .+.+.+|++++++++||||+++++++.+...
T Consensus 7 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 86 (346)
T 1ua2_A 7 SRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSN 86 (346)
T ss_dssp ------CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTC
T ss_pred HHhcccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeCCc
Confidence 34578999999999999999999764 58999999987543211 2467899999999999999999999999999
Q ss_pred EEEEEeecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeeccccee
Q 045553 872 MFLIYNYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARL 951 (1082)
Q Consensus 872 ~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~ 951 (1082)
.++||||+++ +|.+++... ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.
T Consensus 87 ~~lv~e~~~~-~l~~~~~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~ 161 (346)
T 1ua2_A 87 ISLVFDFMET-DLEVIIKDN-SLVLTPSHIKAYMLMTLQGLEYLHQH---WILHRDLKPNNLLLDENGVLKLADFGLAKS 161 (346)
T ss_dssp CEEEEECCSE-EHHHHHTTC-CSSCCSSHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECCCGGGST
T ss_pred eEEEEEcCCC-CHHHHHHhc-CcCCCHHHHHHHHHHHHHHHHHHHHC---CEECCCCCHHHEEEcCCCCEEEEeccccee
Confidence 9999999965 899988765 45688899999999999999999999 999999999999999999999999999987
Q ss_pred cCCCCCccccCcccCCCcccchhcccC-CCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHh-cCCC
Q 045553 952 LGTSETHATTDVAGTFGYVAPEYAMTC-RVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLL-QGRP 1029 (1082)
Q Consensus 952 ~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 1029 (1082)
+..... ......||+.|+|||++.+. .++.++||||+||++|||++|..||.... ..+....... .+..
T Consensus 162 ~~~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~~--------~~~~~~~i~~~~~~~ 232 (346)
T 1ua2_A 162 FGSPNR-AYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDS--------DLDQLTRIFETLGTP 232 (346)
T ss_dssp TTSCCC-CCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSS--------HHHHHHHHHHHHCCC
T ss_pred ccCCcc-cCCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCC--------HHHHHHHHHHHcCCC
Confidence 653322 23445789999999999764 58999999999999999999999986321 1222222221 1111
Q ss_pred --cccccc---------ccCCCCC-----hHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 045553 1030 --CEFFTA---------GLWDCGP-----HDDLIEMLNLAIMCTGESLSSRPSMRQVAQQ 1073 (1082)
Q Consensus 1030 --~~~~d~---------~l~~~~~-----~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~ 1073 (1082)
..+.+. ......+ ...+.++.+++.+|++.||++|||+.|++++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 292 (346)
T 1ua2_A 233 TEEQWPDMCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKM 292 (346)
T ss_dssp CTTTSSSTTSSTTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred ChhhhhhhccCcccccccccCCCChHHhhccCCHHHHHHHHHHhccChhhCCCHHHHhcC
Confidence 111000 0000011 2335789999999999999999999999875
No 224
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Probab=100.00 E-value=1.8e-35 Score=329.07 Aligned_cols=252 Identities=21% Similarity=0.308 Sum_probs=201.7
Q ss_pred CccccceecccCceEEEEEEE-cCCeEEEEEEeecCccccHHHHHHHHHHHhccCCCceeeEeeeeccCCeEEEEEeecC
Q 045553 802 GFNVQNCIGSGGFGATYKAEI-IPGVVVAVKRLSVGRFQGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFLIYNYLP 880 (1082)
Q Consensus 802 ~~~~~~~lg~G~~g~Vy~a~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~~~ 880 (1082)
+|.....||+|+||.||+|.. .+++.||||++........+.+.+|+.+++.++||||+++++++.+.+..++||||++
T Consensus 23 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~ 102 (295)
T 2clq_A 23 ENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVP 102 (295)
T ss_dssp TTSSBCEEEECSSSEEEEEEETTTCCEEEEEEEECCCC---HHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCS
T ss_pred CCCCcEEEeecCcEEEEEEEECCCCeEEEEEEccCCchHHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCCcEEEEEEeCC
Confidence 345556899999999999975 4688999999987666667889999999999999999999999999999999999999
Q ss_pred CCCHHHHHhhCC-CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcC-CCcEEEeecccceecCCCCCc
Q 045553 881 GGNLEKFIQDRP-RRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDN-NLNAYLSDFGLARLLGTSETH 958 (1082)
Q Consensus 881 ~gsL~~~l~~~~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~-~~~~kl~DfGla~~~~~~~~~ 958 (1082)
+++|.+++.... ...+++..+..++.|++.||+|||+. +|+||||||+||+++. ++.+||+|||.+........
T Consensus 103 ~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~~~~~- 178 (295)
T 2clq_A 103 GGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDN---QIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINP- 178 (295)
T ss_dssp EEEHHHHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTCCEEECCTTTCEESCC----
T ss_pred CCCHHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhC---CEEccCCChhhEEEECCCCCEEEeecccccccCCCCC-
Confidence 999999998753 34577999999999999999999999 9999999999999987 89999999999987653322
Q ss_pred cccCcccCCCcccchhcccCC--CCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCCCccccccc
Q 045553 959 ATTDVAGTFGYVAPEYAMTCR--VSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQGRPCEFFTAG 1036 (1082)
Q Consensus 959 ~~~~~~gt~~y~aPE~~~~~~--~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 1036 (1082)
......|++.|+|||++.+.. ++.++||||||+++|||++|+.||..... ........... ..
T Consensus 179 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~------~~~~~~~~~~~-~~-------- 243 (295)
T 2clq_A 179 CTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGE------PQAAMFKVGMF-KV-------- 243 (295)
T ss_dssp --CCCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSS------HHHHHHHHHHH-CC--------
T ss_pred cccccCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCCCc------hhHHHHhhccc-cc--------
Confidence 223457899999999997643 88999999999999999999999963211 11111111111 11
Q ss_pred cCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 045553 1037 LWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQ 1073 (1082)
Q Consensus 1037 l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~ 1073 (1082)
....+...+.++.+++.+|++.||++||++.|++++
T Consensus 244 -~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~ 279 (295)
T 2clq_A 244 -HPEIPESMSAEAKAFILKCFEPDPDKRACANDLLVD 279 (295)
T ss_dssp -CCCCCTTSCHHHHHHHHHTTCSSTTTSCCHHHHHTS
T ss_pred -cccccccCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 111233445689999999999999999999999863
No 225
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*
Probab=100.00 E-value=1.9e-35 Score=346.60 Aligned_cols=199 Identities=22% Similarity=0.397 Sum_probs=168.9
Q ss_pred hcCccccceecccCceEEEEEEEc-CCeEEEEEEeecC--ccccHHHHHHHHHHHhccCCCceeeEeeeeccC-----Ce
Q 045553 800 TAGFNVQNCIGSGGFGATYKAEII-PGVVVAVKRLSVG--RFQGVQQFAAEIRTLGRVQHPNLVTLIGYHVSE-----AE 871 (1082)
Q Consensus 800 ~~~~~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~-----~~ 871 (1082)
.++|++.+.||+|+||.||+|... +++.||||++... .....+.+.+|++++++++||||+++++++... ..
T Consensus 25 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~ 104 (432)
T 3n9x_A 25 PDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFDE 104 (432)
T ss_dssp CTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCC
T ss_pred cCCEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcCCe
Confidence 568999999999999999999654 5899999999753 234457789999999999999999999998766 57
Q ss_pred EEEEEeecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeeccccee
Q 045553 872 MFLIYNYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARL 951 (1082)
Q Consensus 872 ~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~ 951 (1082)
.|+||||++ ++|.+++.. ...+++..+..++.||++||+|||+. +|+||||||+||+++.++.+||+|||+++.
T Consensus 105 ~~lv~e~~~-~~L~~~~~~--~~~l~~~~~~~i~~qil~aL~~LH~~---givHrDlkp~NILl~~~~~~kL~DFGla~~ 178 (432)
T 3n9x_A 105 LYIVLEIAD-SDLKKLFKT--PIFLTEEHIKTILYNLLLGENFIHES---GIIHRDLKPANCLLNQDCSVKVCDFGLART 178 (432)
T ss_dssp EEEEEECCS-EEHHHHHHS--SCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEE
T ss_pred EEEEEecCC-cCHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHHC---CCCCCCCCHHHeEECCCCCEEEccCCCccc
Confidence 999999995 699999986 35699999999999999999999999 999999999999999999999999999997
Q ss_pred cCCCCC---------------------ccccCcccCCCcccchhc-ccCCCCchhhHHHHHHHHHHHHhCCCCCC
Q 045553 952 LGTSET---------------------HATTDVAGTFGYVAPEYA-MTCRVSDKADVYSFGVVLLELISDKKALD 1004 (1082)
Q Consensus 952 ~~~~~~---------------------~~~~~~~gt~~y~aPE~~-~~~~~~~~~Dv~slGvll~elltg~~p~~ 1004 (1082)
...... ......+||+.|+|||++ ....++.++||||+||++|||++|..||.
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~ 253 (432)
T 3n9x_A 179 INSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHI 253 (432)
T ss_dssp C-------------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTTCTTTC
T ss_pred ccccccccccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHHhcccccc
Confidence 754321 123567899999999986 55679999999999999999998766654
No 226
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=8.4e-36 Score=341.66 Aligned_cols=255 Identities=23% Similarity=0.355 Sum_probs=197.5
Q ss_pred hcCccccceecccCceEEEEEEE-cCCeEEEEEEeecCc--cccHHHHHHHHHHHhccCCCceeeEeeeeccC------C
Q 045553 800 TAGFNVQNCIGSGGFGATYKAEI-IPGVVVAVKRLSVGR--FQGVQQFAAEIRTLGRVQHPNLVTLIGYHVSE------A 870 (1082)
Q Consensus 800 ~~~~~~~~~lg~G~~g~Vy~a~~-~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~------~ 870 (1082)
..+|++.+.||+|+||.||+|.. .+|+.||||++.... ....+.+.+|+++++.++||||+++++++... .
T Consensus 24 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~ 103 (367)
T 1cm8_A 24 RAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFT 103 (367)
T ss_dssp BSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCC
T ss_pred cceEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccCc
Confidence 46799999999999999999976 468999999986432 23356788999999999999999999998765 3
Q ss_pred eEEEEEeecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccce
Q 045553 871 EMFLIYNYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLAR 950 (1082)
Q Consensus 871 ~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~ 950 (1082)
..|+||||+ +++|.++++. ..+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++
T Consensus 104 ~~~lv~e~~-~~~L~~~~~~---~~l~~~~~~~~~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~ 176 (367)
T 1cm8_A 104 DFYLVMPFM-GTDLGKLMKH---EKLGEDRIQFLVYQMLKGLRYIHAA---GIIHRDLKPGNLAVNEDCELKILDFGLAR 176 (367)
T ss_dssp CCEEEEECC-SEEHHHHHHH---CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCE
T ss_pred eEEEEEecC-CCCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCcCHHHEEEcCCCCEEEEeeeccc
Confidence 469999999 8899999986 3589999999999999999999999 99999999999999999999999999998
Q ss_pred ecCCCCCccccCcccCCCcccchhccc-CCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHH-hcCC
Q 045553 951 LLGTSETHATTDVAGTFGYVAPEYAMT-CRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLL-LQGR 1028 (1082)
Q Consensus 951 ~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~ 1028 (1082)
..... .....||+.|+|||++.+ ..++.++||||+||++|||++|+.||.... ..+.+..+. ..+.
T Consensus 177 ~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~--------~~~~l~~i~~~~g~ 244 (367)
T 1cm8_A 177 QADSE----MTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSD--------HLDQLKEIMKVTGT 244 (367)
T ss_dssp ECCSS----CCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSS--------HHHHHHHHHHHHCC
T ss_pred ccccc----cCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCCC--------HHHHHHHHHHhcCC
Confidence 76432 334578999999999987 789999999999999999999999997431 111112111 1111
Q ss_pred Ccccccccc-------------------CCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 045553 1029 PCEFFTAGL-------------------WDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQ 1073 (1082)
Q Consensus 1029 ~~~~~d~~l-------------------~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~ 1073 (1082)
....+...+ ...........+.+++.+|++.||++|||+.|++++
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~mL~~dP~~R~t~~e~l~h 308 (367)
T 1cm8_A 245 PPAEFVQRLQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAH 308 (367)
T ss_dssp CCHHHHHTCSCHHHHHHHHHSCCCCCCCGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred CCHHHHHHhhhHHHHHHHHhCCCCCCCCHHHHCCCCCHHHHHHHHHHccCChhHCCCHHHHhcC
Confidence 111000000 001112345679999999999999999999999874
No 227
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A
Probab=100.00 E-value=1.6e-35 Score=328.62 Aligned_cols=248 Identities=24% Similarity=0.366 Sum_probs=200.7
Q ss_pred cCccccceecccCceEEEEEEEc-CCeEEEEEEeecCc--cccHHHHHHHHHHHhccCCCceeeEeeeecc----CCeEE
Q 045553 801 AGFNVQNCIGSGGFGATYKAEII-PGVVVAVKRLSVGR--FQGVQQFAAEIRTLGRVQHPNLVTLIGYHVS----EAEMF 873 (1082)
Q Consensus 801 ~~~~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~----~~~~~ 873 (1082)
..|++.+.||+|+||.||+|... ++..||+|++.... ....+.+.+|++++++++||||+++++++.. ....+
T Consensus 26 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 105 (290)
T 1t4h_A 26 RFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIV 105 (290)
T ss_dssp CEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEE
T ss_pred eeEEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCceEE
Confidence 34788899999999999999654 57899999987543 3445678999999999999999999998764 45689
Q ss_pred EEEeecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCC--eEeccCCCCCEEEc-CCCcEEEeecccce
Q 045553 874 LIYNYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPR--VLHRDIKPSNILLD-NNLNAYLSDFGLAR 950 (1082)
Q Consensus 874 lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~--ivH~Dlk~~Nill~-~~~~~kl~DfGla~ 950 (1082)
+||||+++++|.+++... ..+++..+..++.|++.||+|||+. + |+||||||+||+++ .++.+||+|||++.
T Consensus 106 lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~---~~~i~H~dikp~Nil~~~~~~~~kl~Dfg~~~ 180 (290)
T 1t4h_A 106 LVTELMTSGTLKTYLKRF--KVMKIKVLRSWCRQILKGLQFLHTR---TPPIIHRDLKCDNIFITGPTGSVKIGDLGLAT 180 (290)
T ss_dssp EEEECCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHTS---SSCCCCSCCCGGGEEESSTTSCEEECCTTGGG
T ss_pred EEEEecCCCCHHHHHHHc--cCCCHHHHHHHHHHHHHHHHHHHcC---CCCEEECCCCHHHEEEECCCCCEEEeeCCCcc
Confidence 999999999999999874 4689999999999999999999999 7 99999999999998 78999999999997
Q ss_pred ecCCCCCccccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCCCc
Q 045553 951 LLGTSETHATTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQGRPC 1030 (1082)
Q Consensus 951 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1030 (1082)
..... ......|++.|+|||++.+ .++.++||||+|+++|+|++|+.||... .......... ..+...
T Consensus 181 ~~~~~---~~~~~~~t~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~pf~~~-------~~~~~~~~~~-~~~~~~ 248 (290)
T 1t4h_A 181 LKRAS---FAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSEC-------QNAAQIYRRV-TSGVKP 248 (290)
T ss_dssp GCCTT---SBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTC-------SSHHHHHHHH-TTTCCC
T ss_pred ccccc---ccccccCCcCcCCHHHHhc-cCCCcchHHHHHHHHHHHHhCCCCCCCc-------CcHHHHHHHH-hccCCc
Confidence 54332 2234568999999998864 5899999999999999999999999632 2222332222 222111
Q ss_pred cccccccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 045553 1031 EFFTAGLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQ 1073 (1082)
Q Consensus 1031 ~~~d~~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~ 1073 (1082)
..+ +...+.++.+++.+|++.+|++||++.|++++
T Consensus 249 ~~~--------~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h 283 (290)
T 1t4h_A 249 ASF--------DKVAIPEVKEIIEGCIRQNKDERYSIKDLLNH 283 (290)
T ss_dssp GGG--------GGCCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred ccc--------CCCCCHHHHHHHHHHccCChhhCCCHHHHhhC
Confidence 111 11223579999999999999999999999864
No 228
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=7.7e-36 Score=344.70 Aligned_cols=258 Identities=22% Similarity=0.325 Sum_probs=197.3
Q ss_pred HHhcCccccceecccCceEEEEEEE-cCCeEEEEEEeecCccccHHHHHHHHHHHhccCCCceeeEeeeecc--------
Q 045553 798 RATAGFNVQNCIGSGGFGATYKAEI-IPGVVVAVKRLSVGRFQGVQQFAAEIRTLGRVQHPNLVTLIGYHVS-------- 868 (1082)
Q Consensus 798 ~~~~~~~~~~~lg~G~~g~Vy~a~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~-------- 868 (1082)
....+|++.+.||+|+||+||+|.. .+|+.||||++...... ..+|+++++.++||||+++++++..
T Consensus 4 ~~~~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~~----~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~ 79 (383)
T 3eb0_A 4 TSSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPRY----KNRELDIMKVLDHVNIIKLVDYFYTTGDEEPKP 79 (383)
T ss_dssp --CTTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCTTS----CCHHHHHHTTCCCTTBCCEEEEEEEC-------
T ss_pred cccceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCcch----HHHHHHHHHHcCCCCccchhheeeecCcccccc
Confidence 3567899999999999999999965 57899999998754322 3479999999999999999998843
Q ss_pred ------------------------------CCeEEEEEeecCCCCHHHHHhh--CCCCCCCHHHHHHHHHHHHHHHHHHh
Q 045553 869 ------------------------------EAEMFLIYNYLPGGNLEKFIQD--RPRRTVEWSMLHKIALDVARALAYLH 916 (1082)
Q Consensus 869 ------------------------------~~~~~lV~E~~~~gsL~~~l~~--~~~~~l~~~~~~~i~~~i~~~L~~LH 916 (1082)
....++||||++ ++|.+.+.. .....+++..+..++.|+++||+|||
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH 158 (383)
T 3eb0_A 80 PQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVP-DTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIH 158 (383)
T ss_dssp ------------------------------CCEEEEEECCCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred cccccccccccccccccccccccccccCCCceEEEEEEecCC-ccHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 334889999997 688887764 23567999999999999999999999
Q ss_pred hCCCCCeEeccCCCCCEEEc-CCCcEEEeecccceecCCCCCccccCcccCCCcccchhcccC-CCCchhhHHHHHHHHH
Q 045553 917 DECVPRVLHRDIKPSNILLD-NNLNAYLSDFGLARLLGTSETHATTDVAGTFGYVAPEYAMTC-RVSDKADVYSFGVVLL 994 (1082)
Q Consensus 917 ~~~~~~ivH~Dlk~~Nill~-~~~~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~slGvll~ 994 (1082)
+. +|+||||||+||+++ .++.+||+|||+++.+..... .....||+.|+|||++.+. .++.++||||+||++|
T Consensus 159 ~~---gi~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ 233 (383)
T 3eb0_A 159 SL---GICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSEP--SVAYICSRFYRAPELMLGATEYTPSIDLWSIGCVFG 233 (383)
T ss_dssp TT---TEECSCCCGGGEEEETTTTEEEECCCTTCEECCTTSC--CCCCCCCSSCCCHHHHTTCSSCCTHHHHHHHHHHHH
T ss_pred HC---cCccCccCHHHEEEcCCCCcEEEEECCCCcccCCCCC--CcCcccCCCccCHHHhcCCCCCCcchhhhhHHHHHH
Confidence 99 999999999999998 688999999999987654332 3345789999999998875 4899999999999999
Q ss_pred HHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCC------------Ccccccccc-----CCCCChHHHHHHHHHHHHcc
Q 045553 995 ELISDKKALDPSFCSFGNGFNIVAWASMLLLQGR------------PCEFFTAGL-----WDCGPHDDLIEMLNLAIMCT 1057 (1082)
Q Consensus 995 elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~d~~l-----~~~~~~~~~~~l~~li~~cl 1057 (1082)
||++|+.||.... ...+........+. ..+..-+.. ....+...+..+.+++.+|+
T Consensus 234 ell~g~~pf~~~~-------~~~~~~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L 306 (383)
T 3eb0_A 234 ELILGKPLFSGET-------SIDQLVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGTPSLAIDLLEQIL 306 (383)
T ss_dssp HHHHSSCSSCCSS-------HHHHHHHHHHHHCCCCHHHHHHHCTTC--CCCCCCCCCCHHHHSCTTCCHHHHHHHHHHC
T ss_pred HHHhCCCCCCCCC-------hHHHHHHHHHHhCCCCHHHHHHhCcccccccCCccCcccHHhhCCCCCCHHHHHHHHHHc
Confidence 9999999997421 11111111111111 000000000 00123345567999999999
Q ss_pred cCCCCCCCCHHHHHH
Q 045553 1058 GESLSSRPSMRQVAQ 1072 (1082)
Q Consensus 1058 ~~~p~~RPt~~ev~~ 1072 (1082)
+.||++|||+.|+++
T Consensus 307 ~~dP~~R~t~~e~l~ 321 (383)
T 3eb0_A 307 RYEPDLRINPYEAMA 321 (383)
T ss_dssp CSSGGGSCCHHHHHT
T ss_pred cCChhhCCCHHHHhc
Confidence 999999999999985
No 229
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Probab=100.00 E-value=2e-36 Score=338.13 Aligned_cols=263 Identities=24% Similarity=0.356 Sum_probs=189.0
Q ss_pred HhcCccccceecccCceEEEEEEE-cCCeEEEEEEeecCc-cccHHHHHHHHHHHhccCCCceeeEeeeeccCCeEEEEE
Q 045553 799 ATAGFNVQNCIGSGGFGATYKAEI-IPGVVVAVKRLSVGR-FQGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFLIY 876 (1082)
Q Consensus 799 ~~~~~~~~~~lg~G~~g~Vy~a~~-~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 876 (1082)
..++|++.+.||+|+||.||+|.. .+++.||||++.... ....+++.+|++++++++||||+++++++...+..++||
T Consensus 13 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 92 (303)
T 2vwi_A 13 NRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVM 92 (303)
T ss_dssp CCCCCEEEEECC---CCCEEEEEC----CEEEEECCC----------------CCCCCCCTTBCCEEEEEESSSCEEEEE
T ss_pred chhhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhcchhHHHHHHHHHHHhhcCCCCEeeEEEEEeecCCcEEEe
Confidence 356899999999999999999964 468999999986543 234567889999999999999999999999999999999
Q ss_pred eecCCCCHHHHHhhC------CCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccce
Q 045553 877 NYLPGGNLEKFIQDR------PRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLAR 950 (1082)
Q Consensus 877 E~~~~gsL~~~l~~~------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~ 950 (1082)
||+++++|.+++... ....+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++.
T Consensus 93 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~ 169 (303)
T 2vwi_A 93 KLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKN---GQIHRDVKAGNILLGEDGSVQIADFGVSA 169 (303)
T ss_dssp ECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTCCEEECCCHHHH
T ss_pred hhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhC---CCCCCCCChhhEEEcCCCCEEEEeccchh
Confidence 999999999998741 245689999999999999999999999 99999999999999999999999999998
Q ss_pred ecCCCCC----ccccCcccCCCcccchhccc-CCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHh
Q 045553 951 LLGTSET----HATTDVAGTFGYVAPEYAMT-CRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLL 1025 (1082)
Q Consensus 951 ~~~~~~~----~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 1025 (1082)
....... .......|++.|+|||++.+ ..++.++||||||+++|||++|+.||...... ........
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~--------~~~~~~~~ 241 (303)
T 2vwi_A 170 FLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPM--------KVLMLTLQ 241 (303)
T ss_dssp HCC---------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSCGG--------GHHHHHHT
T ss_pred eeccCCCccchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCccCchh--------hHHHHHhc
Confidence 6643221 12234578999999999876 56899999999999999999999999743211 11111111
Q ss_pred cCCCccccccccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 045553 1026 QGRPCEFFTAGLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQ 1073 (1082)
Q Consensus 1026 ~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~ 1073 (1082)
+..................+..+.+++.+|++.||++||++.|++++
T Consensus 242 -~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h 288 (303)
T 2vwi_A 242 -NDPPSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLRH 288 (303)
T ss_dssp -SSCCCTTC-----CCCCCCCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred -cCCCccccccccchhhhhhhHHHHHHHHHHccCChhhCcCHHHHhhC
Confidence 11111111000011122345678999999999999999999999863
No 230
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*
Probab=100.00 E-value=1.1e-35 Score=345.67 Aligned_cols=265 Identities=22% Similarity=0.282 Sum_probs=205.9
Q ss_pred hcCccccceecccCceEEEEEEE-cCCeEEEEEEeecCccccHHHHHHHHHHHhccC--------CCceeeEeeeec---
Q 045553 800 TAGFNVQNCIGSGGFGATYKAEI-IPGVVVAVKRLSVGRFQGVQQFAAEIRTLGRVQ--------HPNLVTLIGYHV--- 867 (1082)
Q Consensus 800 ~~~~~~~~~lg~G~~g~Vy~a~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~--------h~niv~l~~~~~--- 867 (1082)
.++|++.++||+|+||+||+|.. .+++.||||++... ....+.+.+|++++++++ |+||+++++++.
T Consensus 36 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~~~ 114 (397)
T 1wak_A 36 NGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSA-EHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISG 114 (397)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEEEE
T ss_pred CCeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecC-CcchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceeecC
Confidence 46799999999999999999965 46899999999754 234567889999999986 788999999887
Q ss_pred -cCCeEEEEEeecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCC-------
Q 045553 868 -SEAEMFLIYNYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNL------- 939 (1082)
Q Consensus 868 -~~~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~------- 939 (1082)
.....++||||+ ++++.+++.......+++..++.++.||+.||+|||+.+ +|+||||||+|||++.++
T Consensus 115 ~~~~~~~lv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~--givHrDikp~NIll~~~~~~~~~~~ 191 (397)
T 1wak_A 115 VNGTHICMVFEVL-GHHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLHTKC--RIIHTDIKPENILLSVNEQYIRRLA 191 (397)
T ss_dssp TTEEEEEEEECCC-CCBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTT--CEECCCCSGGGEEECCCHHHHHHHH
T ss_pred CCCceEEEEEecc-CccHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHhC--CEecCCCCHHHeeEeccchhhhhhh
Confidence 566899999999 677777777655567999999999999999999999964 899999999999999775
Q ss_pred ------------------------------------------cEEEeecccceecCCCCCccccCcccCCCcccchhccc
Q 045553 940 ------------------------------------------NAYLSDFGLARLLGTSETHATTDVAGTFGYVAPEYAMT 977 (1082)
Q Consensus 940 ------------------------------------------~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~ 977 (1082)
.+||+|||.+...... .....||+.|+|||++.+
T Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~----~~~~~gt~~y~aPE~~~~ 267 (397)
T 1wak_A 192 AEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKH----FTEDIQTRQYRSLEVLIG 267 (397)
T ss_dssp HHHC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBC----SCSCCSCGGGCCHHHHHT
T ss_pred hhhHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEecccccccccccc----CccCCCCCcccCChhhcC
Confidence 7999999999876533 234578999999999999
Q ss_pred CCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCCCc-----------cccccc-----c----
Q 045553 978 CRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQGRPC-----------EFFTAG-----L---- 1037 (1082)
Q Consensus 978 ~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~d~~-----l---- 1037 (1082)
..++.++|||||||++|||++|+.||....... ...............+... +.+... +
T Consensus 268 ~~~~~~~DiwslG~il~elltg~~pf~~~~~~~-~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 346 (397)
T 1wak_A 268 SGYNTPADIWSTACMAFELATGDYLFEPHSGEE-YTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDLKHITKLK 346 (397)
T ss_dssp SCCCTHHHHHHHHHHHHHHHHSSCSCCCCCCSS-SCHHHHHHHHHHHHHCSCCHHHHHHCTTGGGTBCTTSSBSSCCCCC
T ss_pred CCCCcHHHHHHHHHHHHHHhhCCCCCCCCcccc-cCchHHHHHHHHHhcCCCChHHhhcccccccccCCccccccccccC
Confidence 999999999999999999999999997543221 0111111111111111110 011000 0
Q ss_pred ----------CCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 045553 1038 ----------WDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQ 1073 (1082)
Q Consensus 1038 ----------~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~ 1073 (1082)
....+......+.+++.+|++.||++|||+.|++++
T Consensus 347 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 392 (397)
T 1wak_A 347 PWGLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLRH 392 (397)
T ss_dssp CCCHHHHHHHTSCCCHHHHHHHHHHHGGGGCSSGGGSCCHHHHHTS
T ss_pred CcchhHhhhhhcccchhhHHHHHHHHHHHhccChhhcCCHHHHhhC
Confidence 001345667889999999999999999999999863
No 231
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*
Probab=100.00 E-value=7.6e-36 Score=340.47 Aligned_cols=259 Identities=19% Similarity=0.328 Sum_probs=208.2
Q ss_pred hcCccccceecccCceEEEEEEEcCCeEEEEEEeecCcccc-----------------HHHHHHHHHHHhccCCCceeeE
Q 045553 800 TAGFNVQNCIGSGGFGATYKAEIIPGVVVAVKRLSVGRFQG-----------------VQQFAAEIRTLGRVQHPNLVTL 862 (1082)
Q Consensus 800 ~~~~~~~~~lg~G~~g~Vy~a~~~~~~~vavK~~~~~~~~~-----------------~~~~~~e~~~l~~l~h~niv~l 862 (1082)
.++|++.+.||+|+||.||+|.. +++.||||++....... .+.+.+|++++++++||||+++
T Consensus 30 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~ 108 (348)
T 2pml_X 30 INDYRIIRTLNQGKFNKIILCEK-DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTC 108 (348)
T ss_dssp ETTEEEEEEEECCSSCCEEEEEE-TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCCC
T ss_pred cCceEEEEEEcCCCCeEEEEEEc-CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcceE
Confidence 46899999999999999999988 89999999986542211 2789999999999999999999
Q ss_pred eeeeccCCeEEEEEeecCCCCHHHH------HhhCCCCCCCHHHHHHHHHHHHHHHHHHhh-CCCCCeEeccCCCCCEEE
Q 045553 863 IGYHVSEAEMFLIYNYLPGGNLEKF------IQDRPRRTVEWSMLHKIALDVARALAYLHD-ECVPRVLHRDIKPSNILL 935 (1082)
Q Consensus 863 ~~~~~~~~~~~lV~E~~~~gsL~~~------l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~-~~~~~ivH~Dlk~~Nill 935 (1082)
++++.+.+..++||||+++++|.++ +.......+++..++.++.|++.||+|||+ . +|+||||||+||++
T Consensus 109 ~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---~i~H~dl~p~Nil~ 185 (348)
T 2pml_X 109 EGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEK---NICHRDVKPSNILM 185 (348)
T ss_dssp SEEEESSSEEEEEEECCTTCBSSEESSSEESSCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTS---CEECCCCCGGGEEE
T ss_pred EEEEeeCCeEEEEEeccCCCcHHHHHHHhhhhhhccccCCCHHHHHHHHHHHHHHHHHHhccC---CEeecCCChHhEEE
Confidence 9999999999999999999999999 665446789999999999999999999999 8 99999999999999
Q ss_pred cCCCcEEEeecccceecCCCCCccccCcccCCCcccchhcccC-CCCc-hhhHHHHHHHHHHHHhCCCCCCCCccCCCCC
Q 045553 936 DNNLNAYLSDFGLARLLGTSETHATTDVAGTFGYVAPEYAMTC-RVSD-KADVYSFGVVLLELISDKKALDPSFCSFGNG 1013 (1082)
Q Consensus 936 ~~~~~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~-~~Dv~slGvll~elltg~~p~~~~~~~~~~~ 1013 (1082)
+.++.+||+|||.+...... ......|+..|+|||++.+. .++. ++||||||+++|||++|+.||......
T Consensus 186 ~~~~~~kl~dfg~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~---- 258 (348)
T 2pml_X 186 DKNGRVKLSDFGESEYMVDK---KIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISL---- 258 (348)
T ss_dssp CTTSCEEECCCTTCEECBTT---EECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCSSCCSSCS----
T ss_pred cCCCcEEEeccccccccccc---cccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCCcH----
Confidence 99999999999999876433 33446799999999999887 6666 999999999999999999999743211
Q ss_pred ccHHHHHHHHHhcCCCccccccc-----cC----CCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 045553 1014 FNIVAWASMLLLQGRPCEFFTAG-----LW----DCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQ 1073 (1082)
Q Consensus 1014 ~~~~~~~~~~~~~~~~~~~~d~~-----l~----~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~ 1073 (1082)
.+.... +..+...-..+.. .. .......+..+.+++.+|++.||++||++.|++++
T Consensus 259 ---~~~~~~-i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~e~l~h 323 (348)
T 2pml_X 259 ---VELFNN-IRTKNIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALKH 323 (348)
T ss_dssp ---HHHHHH-HTSCCCCCCCSSSSSTTTTCC--------CCCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred ---HHHHHH-HhccCcCCccchhhhhccccccccccchhhcCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 122222 2222111100000 00 00113445789999999999999999999999873
No 232
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*
Probab=100.00 E-value=4.4e-36 Score=339.77 Aligned_cols=261 Identities=21% Similarity=0.340 Sum_probs=200.8
Q ss_pred hcCccccceecccCceEEEEEEEc-CCeEEEEEEeecCcc--ccHHHHHHHHHHHhccCCCceeeEeeeeccCCeEEEEE
Q 045553 800 TAGFNVQNCIGSGGFGATYKAEII-PGVVVAVKRLSVGRF--QGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFLIY 876 (1082)
Q Consensus 800 ~~~~~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 876 (1082)
.++|++.+.||+|+||.||+|... +|+.||||++..... ...+.+.+|++++++++||||+++++++.+.+..++||
T Consensus 24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 103 (331)
T 4aaa_A 24 MEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLVF 103 (331)
T ss_dssp GGGEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hhhheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCCEEEEEE
Confidence 457999999999999999999765 489999999865433 23456789999999999999999999999999999999
Q ss_pred eecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCCCC
Q 045553 877 NYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGTSE 956 (1082)
Q Consensus 877 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~ 956 (1082)
||+++++|.++... ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||.++......
T Consensus 104 e~~~~~~l~~~~~~--~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 178 (331)
T 4aaa_A 104 EFVDHTILDDLELF--PNGLDYQVVQKYLFQIINGIGFCHSH---NIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPG 178 (331)
T ss_dssp ECCSEEHHHHHHHS--TTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCTTC-------
T ss_pred ecCCcchHHHHHhh--ccCCCHHHHHHHHHHHHHHHHHHHHC---CEEccCcChheEEEcCCCcEEEEeCCCceeecCCc
Confidence 99999999888765 34699999999999999999999999 99999999999999999999999999998764332
Q ss_pred CccccCcccCCCcccchhcccC-CCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCC-------
Q 045553 957 THATTDVAGTFGYVAPEYAMTC-RVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQGR------- 1028 (1082)
Q Consensus 957 ~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~------- 1028 (1082)
. ......|++.|+|||++.+. .++.++||||+|+++|||++|+.||.... ............+.
T Consensus 179 ~-~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~-------~~~~~~~~~~~~~~~~~~~~~ 250 (331)
T 4aaa_A 179 E-VYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDS-------DIDQLYHIMMCLGNLIPRHQE 250 (331)
T ss_dssp ------CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSS-------HHHHHHHHHHHHCSCCHHHHH
T ss_pred c-ccCCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCC-------cHHHHHHHHHHhCCCChhhhh
Confidence 2 23345689999999999875 78999999999999999999999997432 11111111111110
Q ss_pred -------CccccccccCCCCC-----hHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 045553 1029 -------PCEFFTAGLWDCGP-----HDDLIEMLNLAIMCTGESLSSRPSMRQVAQQ 1073 (1082)
Q Consensus 1029 -------~~~~~d~~l~~~~~-----~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~ 1073 (1082)
......+......+ ...+..+.+++.+|++.||++|||+.|++++
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~h 307 (331)
T 4aaa_A 251 LFNKNPVFAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLHH 307 (331)
T ss_dssp HHHHCGGGTTCCCCCCSSCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred HhhhccccccccCccccccchhhhcccchhHHHHHHHHHHhccCcccCCCHHHHhcC
Confidence 00111111111111 1345789999999999999999999998764
No 233
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=100.00 E-value=1.5e-35 Score=353.46 Aligned_cols=251 Identities=23% Similarity=0.317 Sum_probs=205.7
Q ss_pred hcCccccceecccCceEEEEEEEc-CCeEEEEEEeecCc--cccHHHHHHHHHHHhccCCCceeeEeeeeccCCeEEEEE
Q 045553 800 TAGFNVQNCIGSGGFGATYKAEII-PGVVVAVKRLSVGR--FQGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFLIY 876 (1082)
Q Consensus 800 ~~~~~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 876 (1082)
.++|++.++||+|+||+||+|... +++.||||++.... ......+.+|++++++++||||+++++++.+....++||
T Consensus 21 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 100 (486)
T 3mwu_A 21 AERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVG 100 (486)
T ss_dssp HHHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hcceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCCEEEEEE
Confidence 457999999999999999999765 68999999986432 234678899999999999999999999999999999999
Q ss_pred eecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEc---CCCcEEEeecccceecC
Q 045553 877 NYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLD---NNLNAYLSDFGLARLLG 953 (1082)
Q Consensus 877 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~---~~~~~kl~DfGla~~~~ 953 (1082)
||+++|+|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+||+++ .++.+||+|||+++.+.
T Consensus 101 e~~~~~~L~~~~~~~--~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~ 175 (486)
T 3mwu_A 101 ELYTGGELFDEIIKR--KRFSEHDAARIIKQVFSGITYMHKH---NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQ 175 (486)
T ss_dssp CCCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEESSSSTTCCEEECSCSCTTTBC
T ss_pred EcCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCchHHEEEecCCCCCCEEEEECCcCeECC
Confidence 999999999998764 4689999999999999999999999 999999999999995 56689999999998664
Q ss_pred CCCCccccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCCCcccc
Q 045553 954 TSETHATTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQGRPCEFF 1033 (1082)
Q Consensus 954 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1033 (1082)
... ......||+.|+|||++.+ .++.++||||+||++|+|++|+.||... ...+..............
T Consensus 176 ~~~--~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~--------~~~~~~~~i~~~~~~~~~- 243 (486)
T 3mwu_A 176 QNT--KMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGK--------NEYDILKRVETGKYAFDL- 243 (486)
T ss_dssp CC------CCTTGGGGCCGGGGGS-CCCHHHHHHHHHHHHHHHHHSSCSSCCS--------SHHHHHHHHHHTCCCSCS-
T ss_pred CCC--ccCCCcCCCCCCCHHHhCC-CCCchhhHHHHHHHHHHHHhCCCCCCCC--------CHHHHHHHHHhCCCCCCC-
Confidence 332 2344579999999999876 5899999999999999999999999632 222333333222211110
Q ss_pred ccccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 045553 1034 TAGLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQ 1073 (1082)
Q Consensus 1034 d~~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~ 1073 (1082)
......+.++.+++.+|++.+|++|||+.|++++
T Consensus 244 ------~~~~~~s~~~~~li~~~L~~dp~~R~t~~~~l~h 277 (486)
T 3mwu_A 244 ------PQWRTISDDAKDLIRKMLTFHPSLRITATQCLEH 277 (486)
T ss_dssp ------GGGGGSCHHHHHHHHHHTCSSTTTSCCHHHHHHC
T ss_pred ------cccCCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 0112345689999999999999999999999875
No 234
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}
Probab=100.00 E-value=3.6e-35 Score=329.71 Aligned_cols=251 Identities=27% Similarity=0.402 Sum_probs=203.3
Q ss_pred HhcCccccceecccCceEEEEEEEc-CCeEEEEEEeecCccccHHHHHHHHHHHhccCCCceeeEeeeeccCCeEEEEEe
Q 045553 799 ATAGFNVQNCIGSGGFGATYKAEII-PGVVVAVKRLSVGRFQGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFLIYN 877 (1082)
Q Consensus 799 ~~~~~~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~E 877 (1082)
...+|++.+.||+|+||.||+|... +|+.||||++.... ..+.+.+|++++++++||||+++++++......++|||
T Consensus 27 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~--~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 104 (314)
T 3com_A 27 PEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVES--DLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVME 104 (314)
T ss_dssp ---CEEEEEECC----CEEEEEEETTTCCEEEEEEEETTS--CCHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred chhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCchH--HHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEee
Confidence 4567999999999999999999765 58999999997643 34678999999999999999999999999999999999
Q ss_pred ecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCCCCC
Q 045553 878 YLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGTSET 957 (1082)
Q Consensus 878 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~ 957 (1082)
|+++++|.+++... ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||.+........
T Consensus 105 ~~~~~~L~~~~~~~-~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~ 180 (314)
T 3com_A 105 YCGAGSVSDIIRLR-NKTLTEDEIATILQSTLKGLEYLHFM---RKIHRDIKAGNILLNTEGHAKLADFGVAGQLTDTMA 180 (314)
T ss_dssp CCTTEEHHHHHHHH-TCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEECBTTBS
T ss_pred cCCCCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHhC---CCcCCCcCHHHEEECCCCCEEEeecccchhhhhhcc
Confidence 99999999999743 45789999999999999999999999 999999999999999999999999999987654322
Q ss_pred ccccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCCCcccccccc
Q 045553 958 HATTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQGRPCEFFTAGL 1037 (1082)
Q Consensus 958 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 1037 (1082)
......|++.|+|||++.+..++.++||||||+++|||++|+.||.... ............ ....
T Consensus 181 -~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~--------~~~~~~~~~~~~-~~~~----- 245 (314)
T 3com_A 181 -KRNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIH--------PMRAIFMIPTNP-PPTF----- 245 (314)
T ss_dssp -CBCCCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTSC--------HHHHHHHHHHSC-CCCC-----
T ss_pred -ccCccCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCCCC--------hHHHHHHHhcCC-Cccc-----
Confidence 2334578999999999999999999999999999999999999996321 112122211111 1111
Q ss_pred CCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 045553 1038 WDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQ 1072 (1082)
Q Consensus 1038 ~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~ 1072 (1082)
..+...+..+.+++.+|++.||++||++.|+++
T Consensus 246 --~~~~~~~~~l~~li~~~l~~dp~~Rpt~~~ll~ 278 (314)
T 3com_A 246 --RKPELWSDNFTDFVKQCLVKSPEQRATATQLLQ 278 (314)
T ss_dssp --SSGGGSCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred --CCcccCCHHHHHHHHHHccCChhhCcCHHHHHh
Confidence 112334568999999999999999999999976
No 235
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=100.00 E-value=8.3e-36 Score=355.70 Aligned_cols=251 Identities=25% Similarity=0.342 Sum_probs=208.1
Q ss_pred hcCccccceecccCceEEEEEEEc-CCeEEEEEEeecCc---cccHHHHHHHHHHHhccCCCceeeEeeeeccCCeEEEE
Q 045553 800 TAGFNVQNCIGSGGFGATYKAEII-PGVVVAVKRLSVGR---FQGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFLI 875 (1082)
Q Consensus 800 ~~~~~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV 875 (1082)
.++|++.+.||+|+||.||+|... +|+.||||++.... ....+.+.+|++++++++||||+++++++.+....++|
T Consensus 25 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 104 (484)
T 3nyv_A 25 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLV 104 (484)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred cCceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEE
Confidence 457999999999999999999765 68999999996543 34567899999999999999999999999999999999
Q ss_pred EeecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEE---cCCCcEEEeecccceec
Q 045553 876 YNYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILL---DNNLNAYLSDFGLARLL 952 (1082)
Q Consensus 876 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill---~~~~~~kl~DfGla~~~ 952 (1082)
|||+.+|+|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+||++ +.++.+||+|||+++.+
T Consensus 105 ~e~~~~~~L~~~~~~~--~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~ 179 (484)
T 3nyv_A 105 GEVYTGGELFDEIISR--KRFSEVDAARIIRQVLSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHF 179 (484)
T ss_dssp ECCCCSCBHHHHHHTC--SCCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESSSSTTCCEEECCTTHHHHB
T ss_pred EecCCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEEecCCCCCcEEEEeeeeeEEc
Confidence 9999999999999864 4689999999999999999999999 99999999999999 56789999999999876
Q ss_pred CCCCCccccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCCCccc
Q 045553 953 GTSETHATTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQGRPCEF 1032 (1082)
Q Consensus 953 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1032 (1082)
.... ......||+.|+|||++.+ .++.++||||+||++|+|++|+.||... ...+..............
T Consensus 180 ~~~~--~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~--------~~~~~~~~i~~~~~~~~~ 248 (484)
T 3nyv_A 180 EASK--KMKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGA--------NEYDILKKVEKGKYTFEL 248 (484)
T ss_dssp CCCC--SHHHHTTGGGTCCHHHHHT-CCCTHHHHHHHHHHHHHHHHSSCSSCCS--------SHHHHHHHHHHCCCCCCS
T ss_pred cccc--ccccCCCCccccCceeecC-CCCCcceeHHHHHHHHHHHHCCCCCCCC--------CHHHHHHHHHcCCCCCCC
Confidence 5433 2234579999999999876 6899999999999999999999999732 222333333222211110
Q ss_pred cccccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 045553 1033 FTAGLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQ 1073 (1082)
Q Consensus 1033 ~d~~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~ 1073 (1082)
......+..+.+++.+|++.+|++|||+.|++++
T Consensus 249 -------~~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~h 282 (484)
T 3nyv_A 249 -------PQWKKVSESAKDLIRKMLTYVPSMRISARDALDH 282 (484)
T ss_dssp -------GGGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred -------cccccCCHHHHHHHHHHCCCChhHCcCHHHHhhC
Confidence 0112345689999999999999999999999863
No 236
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*
Probab=100.00 E-value=1.8e-35 Score=337.76 Aligned_cols=263 Identities=21% Similarity=0.288 Sum_probs=202.0
Q ss_pred hcCccccceecccCceEEEEEEE-cCCeEEEEEEeecCcc--ccHHHHHHHHHHHhccCCCceeeEeeeecc--------
Q 045553 800 TAGFNVQNCIGSGGFGATYKAEI-IPGVVVAVKRLSVGRF--QGVQQFAAEIRTLGRVQHPNLVTLIGYHVS-------- 868 (1082)
Q Consensus 800 ~~~~~~~~~lg~G~~g~Vy~a~~-~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~-------- 868 (1082)
.++|++.+.||+|+||.||+|.. .+|+.||||++..... .....+.+|++++++++||||+++++++..
T Consensus 16 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 95 (351)
T 3mi9_A 16 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRC 95 (351)
T ss_dssp GGGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC-------
T ss_pred ccceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeeccccccccC
Confidence 35799999999999999999976 5689999999865432 234577899999999999999999998876
Q ss_pred CCeEEEEEeecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeeccc
Q 045553 869 EAEMFLIYNYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGL 948 (1082)
Q Consensus 869 ~~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGl 948 (1082)
.+..++||||++ +++.+.+... ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 96 ~~~~~lv~e~~~-~~l~~~l~~~-~~~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg~ 170 (351)
T 3mi9_A 96 KGSIYLVFDFCE-HDLAGLLSNV-LVKFTLSEIKRVMQMLLNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGL 170 (351)
T ss_dssp -CEEEEEEECCS-EEHHHHHHCT-TSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTT
T ss_pred CceEEEEEeccC-CCHHHHHhhc-cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCHHHEEEcCCCCEEEccchh
Confidence 446899999996 5888877664 35699999999999999999999999 999999999999999999999999999
Q ss_pred ceecCCCCC---ccccCcccCCCcccchhccc-CCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHH
Q 045553 949 ARLLGTSET---HATTDVAGTFGYVAPEYAMT-CRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLL 1024 (1082)
Q Consensus 949 a~~~~~~~~---~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 1024 (1082)
++.+..... .......||+.|+|||++.+ ..++.++||||+||++|||++|+.||.... .......+....
T Consensus 171 a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~-----~~~~~~~i~~~~ 245 (351)
T 3mi9_A 171 ARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNT-----EQHQLALISQLC 245 (351)
T ss_dssp CEECCCCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSS-----HHHHHHHHHHHH
T ss_pred cccccccccccccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCCC-----hHHHHHHHHHHh
Confidence 987653222 23345678999999999876 558999999999999999999999997432 111122222211
Q ss_pred hcCCCcccccc----cc-------CCC-CC-hH------HHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 045553 1025 LQGRPCEFFTA----GL-------WDC-GP-HD------DLIEMLNLAIMCTGESLSSRPSMRQVAQQ 1073 (1082)
Q Consensus 1025 ~~~~~~~~~d~----~l-------~~~-~~-~~------~~~~l~~li~~cl~~~p~~RPt~~ev~~~ 1073 (1082)
. ....+.... .. ... .. .+ ....+.+++.+|++.||++|||+.|++++
T Consensus 246 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 312 (351)
T 3mi9_A 246 G-SITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNH 312 (351)
T ss_dssp C-CCCTTTSTTGGGCGGGTSSCCCSSCCCCHHHHHHHHHCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred C-CCChhhccccccchhhcccccccccccCHHHHhhhccCChHHHHHHHHHhcCChhhCCCHHHHhCC
Confidence 1 111111000 00 000 00 00 13458899999999999999999999874
No 237
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*
Probab=100.00 E-value=1.3e-35 Score=364.12 Aligned_cols=257 Identities=26% Similarity=0.379 Sum_probs=208.0
Q ss_pred HhcCccccceecccCceEEEEEEEcC----CeEEEEEEeecCc-cccHHHHHHHHHHHhccCCCceeeEeeeeccCCeEE
Q 045553 799 ATAGFNVQNCIGSGGFGATYKAEIIP----GVVVAVKRLSVGR-FQGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMF 873 (1082)
Q Consensus 799 ~~~~~~~~~~lg~G~~g~Vy~a~~~~----~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 873 (1082)
..++|++.+.||+|+||.||+|.... +..||||++.... ....+.+.+|+.++++++||||+++++++. ++..+
T Consensus 388 ~~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~-~~~~~ 466 (656)
T 2j0j_A 388 QRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVW 466 (656)
T ss_dssp CGGGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSCE
T ss_pred ccccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEe-cCceE
Confidence 34678999999999999999997642 5689999987543 234567899999999999999999999985 45689
Q ss_pred EEEeecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecC
Q 045553 874 LIYNYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLG 953 (1082)
Q Consensus 874 lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~ 953 (1082)
+||||+++|+|.++++.. ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++...
T Consensus 467 lv~E~~~~g~L~~~l~~~-~~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDikp~NILl~~~~~vkL~DFG~a~~~~ 542 (656)
T 2j0j_A 467 IIMELCTLGELRSFLQVR-KFSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYME 542 (656)
T ss_dssp EEEECCTTCBHHHHHHHT-TTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCCCCCCSCC
T ss_pred EEEEcCCCCcHHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHHhC---CccccccchHhEEEeCCCCEEEEecCCCeecC
Confidence 999999999999999875 44689999999999999999999999 99999999999999999999999999998775
Q ss_pred CCCCccccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCccCCCCCccHHHHHHHHHhcCCCccc
Q 045553 954 TSETHATTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELIS-DKKALDPSFCSFGNGFNIVAWASMLLLQGRPCEF 1032 (1082)
Q Consensus 954 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1032 (1082)
...........+++.|+|||++.+..++.++||||||+++|||++ |..||... ...+......... ..
T Consensus 543 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~--------~~~~~~~~i~~~~-~~-- 611 (656)
T 2j0j_A 543 DSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGV--------KNNDVIGRIENGE-RL-- 611 (656)
T ss_dssp C----------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTC--------CHHHHHHHHHHTC-CC--
T ss_pred CCcceeccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCCC--------CHHHHHHHHHcCC-CC--
Confidence 444333344567889999999999999999999999999999997 89998632 2223333222221 11
Q ss_pred cccccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhhC
Q 045553 1033 FTAGLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQLKQIQ 1078 (1082)
Q Consensus 1033 ~d~~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L~~i~ 1078 (1082)
..+...+..+.+++.+||+.||++||++.||++.|+.+.
T Consensus 612 -------~~~~~~~~~l~~li~~~l~~dP~~RPs~~el~~~L~~il 650 (656)
T 2j0j_A 612 -------PMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTIL 650 (656)
T ss_dssp -------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred -------CCCccccHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHH
Confidence 123345578999999999999999999999999998874
No 238
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Probab=100.00 E-value=5.2e-36 Score=338.50 Aligned_cols=259 Identities=22% Similarity=0.371 Sum_probs=203.1
Q ss_pred HHHHHHHhcCccccceecccCceEEEEEEE-cCCeEEEEEEeecCccccHHHHHHHHHHHhcc-CCCceeeEeeeecc--
Q 045553 793 YENVVRATAGFNVQNCIGSGGFGATYKAEI-IPGVVVAVKRLSVGRFQGVQQFAAEIRTLGRV-QHPNLVTLIGYHVS-- 868 (1082)
Q Consensus 793 ~~~~~~~~~~~~~~~~lg~G~~g~Vy~a~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~-- 868 (1082)
+.++....++|++.+.||+|+||.||+|.. .+++.||||++.... ...+.+.+|+++++++ +||||+++++++..
T Consensus 16 ~~~l~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~ 94 (326)
T 2x7f_A 16 LSALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG-DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKN 94 (326)
T ss_dssp CCCCCCCTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS-STTHHHHHHHHHHHHHCCSTTBCCEEEEEEECC
T ss_pred chhccCCCCcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCc-ccHHHHHHHHHHHHhccCCCCeeeeeeEEeecc
Confidence 334445678899999999999999999976 468999999987543 3356788999999999 79999999999876
Q ss_pred ----CCeEEEEEeecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEe
Q 045553 869 ----EAEMFLIYNYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLS 944 (1082)
Q Consensus 869 ----~~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~ 944 (1082)
....++||||+++++|.+++.......+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+
T Consensus 95 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~~kl~ 171 (326)
T 2x7f_A 95 PPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQH---KVIHRDIKGQNVLLTENAEVKLV 171 (326)
T ss_dssp --CCCCEEEEEEECCTTEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTCCEEEC
T ss_pred CccccceEEEEEEcCCCCcHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCcHHHEEEcCCCCEEEe
Confidence 46789999999999999999876556799999999999999999999999 99999999999999999999999
Q ss_pred ecccceecCCCCCccccCcccCCCcccchhcc-----cCCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHH
Q 045553 945 DFGLARLLGTSETHATTDVAGTFGYVAPEYAM-----TCRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAW 1019 (1082)
Q Consensus 945 DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~ 1019 (1082)
|||++........ ......|++.|+|||++. +..++.++||||||+++|||++|+.||.... ....
T Consensus 172 Dfg~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~--------~~~~ 242 (326)
T 2x7f_A 172 DFGVSAQLDRTVG-RRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMH--------PMRA 242 (326)
T ss_dssp CCTTTC--------------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTTSC--------HHHH
T ss_pred eCcCceecCcCcc-ccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCCc--------HHHH
Confidence 9999987643222 223457899999999987 5678999999999999999999999996321 1122
Q ss_pred HHHHHhcCCCccccccccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 045553 1020 ASMLLLQGRPCEFFTAGLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQ 1073 (1082)
Q Consensus 1020 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~ 1073 (1082)
........ .... .+...+..+.+++.+|++.||++||++.|++++
T Consensus 243 ~~~~~~~~-~~~~--------~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h 287 (326)
T 2x7f_A 243 LFLIPRNP-APRL--------KSKKWSKKFQSFIESCLVKNHSQRPATEQLMKH 287 (326)
T ss_dssp HHHHHHSC-CCCC--------SCSCSCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred HHHhhcCc-cccC--------CccccCHHHHHHHHHHhccChhhCCCHHHHhhC
Confidence 22222221 1111 112334689999999999999999999999873
No 239
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*
Probab=100.00 E-value=8.1e-36 Score=342.17 Aligned_cols=269 Identities=23% Similarity=0.297 Sum_probs=203.2
Q ss_pred cccHHHHHHHhcCccccceecccCceEEEEEEEcCCeEEEEEEeecCcc-----------ccHHHHHHHHHHHhccCCCc
Q 045553 790 QLTYENVVRATAGFNVQNCIGSGGFGATYKAEIIPGVVVAVKRLSVGRF-----------QGVQQFAAEIRTLGRVQHPN 858 (1082)
Q Consensus 790 ~~~~~~~~~~~~~~~~~~~lg~G~~g~Vy~a~~~~~~~vavK~~~~~~~-----------~~~~~~~~e~~~l~~l~h~n 858 (1082)
+...+++....++|++.+.||+|+||.||+|...+|+.||||++..... ...+.+.+|++++++++|||
T Consensus 11 ~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ 90 (362)
T 3pg1_A 11 RDLIAELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPN 90 (362)
T ss_dssp HHHHHHHHHTTCSCEEEEEEEEETTEEEEEEECTTSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTT
T ss_pred HHHHHHHHHhccceEEeEEeccCCCEEEEEEECCCCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcC
Confidence 3456778888999999999999999999999888899999999854321 12377899999999999999
Q ss_pred eeeEeeeec-----cCCeEEEEEeecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCE
Q 045553 859 LVTLIGYHV-----SEAEMFLIYNYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNI 933 (1082)
Q Consensus 859 iv~l~~~~~-----~~~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Ni 933 (1082)
|+++++++. .....++||||++ |+|.+++... ...+++..+..++.|++.||+|||+. +|+||||||+||
T Consensus 91 iv~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~NI 165 (362)
T 3pg1_A 91 ILGLRDIFVHFEEPAMHKLYLVTELMR-TDLAQVIHDQ-RIVISPQHIQYFMYHILLGLHVLHEA---GVVHRDLHPGNI 165 (362)
T ss_dssp BCCCSEEEEECCTTTCCEEEEEEECCS-EEHHHHHHCT-TSCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGE
T ss_pred ccceeeeEEeccCCCcceEEEEEccCC-CCHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHHC---cCEecCCChHHE
Confidence 999999884 3446899999996 6898888754 45799999999999999999999999 999999999999
Q ss_pred EEcCCCcEEEeecccceecCCCCCccccCcccCCCcccchhccc-CCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCC
Q 045553 934 LLDNNLNAYLSDFGLARLLGTSETHATTDVAGTFGYVAPEYAMT-CRVSDKADVYSFGVVLLELISDKKALDPSFCSFGN 1012 (1082)
Q Consensus 934 ll~~~~~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~ 1012 (1082)
+++.++.+||+|||+++...... ......|++.|+|||++.+ ..++.++||||+||++|||++|+.||....
T Consensus 166 l~~~~~~~kl~Dfg~~~~~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~----- 238 (362)
T 3pg1_A 166 LLADNNDITICDFNLAREDTADA--NKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGST----- 238 (362)
T ss_dssp EECTTCCEEECCTTC-----------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSS-----
T ss_pred EEcCCCCEEEEecCccccccccc--ccceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCCCCC-----
Confidence 99999999999999997543322 2334578999999999887 678999999999999999999999997421
Q ss_pred CccHHHHHHHHHh---cCCCcc-----------ccccccCC-------CCChHHHHHHHHHHHHcccCCCCCCCCHHHHH
Q 045553 1013 GFNIVAWASMLLL---QGRPCE-----------FFTAGLWD-------CGPHDDLIEMLNLAIMCTGESLSSRPSMRQVA 1071 (1082)
Q Consensus 1013 ~~~~~~~~~~~~~---~~~~~~-----------~~d~~l~~-------~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~ 1071 (1082)
.......... ...... .+...... .........+.+++.+|++.||++|||+.|++
T Consensus 239 ---~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell 315 (362)
T 3pg1_A 239 ---FYNQLNKIVEVVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQAL 315 (362)
T ss_dssp ---HHHHHHHHHHHHCCCCHHHHHHTSCHHHHHHTTTCCCCCCCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCHHHHH
T ss_pred ---HHHHHHHHHHHcCCCChHHhhhccchhhhHHHHhhcccCChhhHHhhCCCCCHHHHHHHHHHhcCChhhCCCHHHHH
Confidence 1122222111 100000 00000000 01123356789999999999999999999998
Q ss_pred HH
Q 045553 1072 QQ 1073 (1082)
Q Consensus 1072 ~~ 1073 (1082)
++
T Consensus 316 ~h 317 (362)
T 3pg1_A 316 RH 317 (362)
T ss_dssp TS
T ss_pred cC
Confidence 74
No 240
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=100.00 E-value=1.4e-35 Score=364.94 Aligned_cols=249 Identities=22% Similarity=0.302 Sum_probs=208.7
Q ss_pred HhcCccccceecccCceEEEEEEEc-CCeEEEEEEeecC---ccccHHHHHHHHHHHhcc-CCCceeeEeeeeccCCeEE
Q 045553 799 ATAGFNVQNCIGSGGFGATYKAEII-PGVVVAVKRLSVG---RFQGVQQFAAEIRTLGRV-QHPNLVTLIGYHVSEAEMF 873 (1082)
Q Consensus 799 ~~~~~~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~ 873 (1082)
...+|++.+.||+|+||.||+|+.. +++.||||++... .....+.+..|.+++..+ +||+|+++++++.+.+..|
T Consensus 339 ~~~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~~~ 418 (674)
T 3pfq_A 339 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLY 418 (674)
T ss_dssp -CTTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSEEE
T ss_pred cccceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCEEE
Confidence 3467999999999999999999755 5889999999753 223456678899999887 7999999999999999999
Q ss_pred EEEeecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecC
Q 045553 874 LIYNYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLG 953 (1082)
Q Consensus 874 lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~ 953 (1082)
+||||+++|+|.++++.. ..+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++...
T Consensus 419 lV~E~~~gg~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~---gIiHrDLKp~NILl~~~g~ikL~DFGla~~~~ 493 (674)
T 3pfq_A 419 FVMEYVNGGDLMYHIQQV--GRFKEPHAVFYAAEIAIGLFFLQSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCKENI 493 (674)
T ss_dssp EEEECCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHT---SEECCCCCSTTEEECSSSCEEECCCTTCEECC
T ss_pred EEEeCcCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhC---CeEeccCChhhEEEcCCCcEEEeecceeeccc
Confidence 999999999999999874 4699999999999999999999999 99999999999999999999999999998643
Q ss_pred CCCCccccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCCCcccc
Q 045553 954 TSETHATTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQGRPCEFF 1033 (1082)
Q Consensus 954 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1033 (1082)
... .......||+.|+|||++.+..++.++|||||||++|||++|+.||... +..+....+.... .
T Consensus 494 ~~~-~~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~~--------~~~~~~~~i~~~~-~---- 559 (674)
T 3pfq_A 494 WDG-VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGE--------DEDELFQSIMEHN-V---- 559 (674)
T ss_dssp CTT-CCBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCCS--------SHHHHHHHHHSSC-C----
T ss_pred cCC-cccccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCCC--------CHHHHHHHHHhCC-C----
Confidence 322 2345578999999999999999999999999999999999999999732 2233333333221 1
Q ss_pred ccccCCCCChHHHHHHHHHHHHcccCCCCCCCCH-----HHHHH
Q 045553 1034 TAGLWDCGPHDDLIEMLNLAIMCTGESLSSRPSM-----RQVAQ 1072 (1082)
Q Consensus 1034 d~~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~-----~ev~~ 1072 (1082)
.+|...+.++.+|+.+|++.||++||++ .||.+
T Consensus 560 ------~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~ei~~ 597 (674)
T 3pfq_A 560 ------AYPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKE 597 (674)
T ss_dssp ------CCCTTSCHHHHHHHHHHSCSSSTTCTTCSTTHHHHHHS
T ss_pred ------CCCccCCHHHHHHHHHHccCCHHHCCCCCCCcHHHHhc
Confidence 2344556789999999999999999987 66654
No 241
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=100.00 E-value=2e-35 Score=352.88 Aligned_cols=251 Identities=22% Similarity=0.318 Sum_probs=201.9
Q ss_pred hcCccccceecccCceEEEEEEEc-CCeEEEEEEeecCc--cccHHHHHHHHHHHhccCCCceeeEeeeeccCCeEEEEE
Q 045553 800 TAGFNVQNCIGSGGFGATYKAEII-PGVVVAVKRLSVGR--FQGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFLIY 876 (1082)
Q Consensus 800 ~~~~~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 876 (1082)
.++|++.+.||+|+||+||+|... ++..||+|++.... ......+.+|+++++.++||||+++++++.+....++||
T Consensus 36 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 115 (494)
T 3lij_A 36 SEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVM 115 (494)
T ss_dssp HHHEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hcCeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence 456999999999999999999765 68999999997543 234567899999999999999999999999999999999
Q ss_pred eecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcC---CCcEEEeecccceecC
Q 045553 877 NYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDN---NLNAYLSDFGLARLLG 953 (1082)
Q Consensus 877 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~---~~~~kl~DfGla~~~~ 953 (1082)
||+++|+|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+||+++. ++.+||+|||+++.+.
T Consensus 116 e~~~~g~L~~~~~~~--~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~~~~ 190 (494)
T 3lij_A 116 ECYKGGELFDEIIHR--MKFNEVDAAVIIKQVLSGVTYLHKH---NIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFE 190 (494)
T ss_dssp ECCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSTTCCEEECCCTTCEECB
T ss_pred ecCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCChhhEEEeCCCCCCcEEEEECCCCeECC
Confidence 999999999988764 4689999999999999999999999 9999999999999976 4559999999998775
Q ss_pred CCCCccccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCCCcccc
Q 045553 954 TSETHATTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQGRPCEFF 1033 (1082)
Q Consensus 954 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1033 (1082)
... ......||+.|+|||++. ..++.++||||+||++|+|++|+.||... ...+............
T Consensus 191 ~~~--~~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~--------~~~~~~~~i~~~~~~~--- 256 (494)
T 3lij_A 191 NQK--KMKERLGTAYYIAPEVLR-KKYDEKCDVWSIGVILFILLAGYPPFGGQ--------TDQEILRKVEKGKYTF--- 256 (494)
T ss_dssp TTB--CBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCS--------SHHHHHHHHHHTCCCC---
T ss_pred CCc--cccccCCCcCeeCHHHHc-ccCCCchhHHHHHHHHHHHHhCCCCCCCC--------CHHHHHHHHHhCCCCC---
Confidence 432 234467999999999986 46899999999999999999999999732 2233333332222111
Q ss_pred ccccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 045553 1034 TAGLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQ 1073 (1082)
Q Consensus 1034 d~~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~ 1073 (1082)
+...+ ...+..+.+++.+|++.+|++|||+.|++++
T Consensus 257 ~~~~~----~~~s~~~~~li~~~L~~dp~~R~s~~e~l~h 292 (494)
T 3lij_A 257 DSPEW----KNVSEGAKDLIKQMLQFDSQRRISAQQALEH 292 (494)
T ss_dssp CSGGG----TTSCHHHHHHHHHHTCSSTTTSCCHHHHHTC
T ss_pred Cchhc----ccCCHHHHHHHHHHCCCChhhCccHHHHhcC
Confidence 11111 1334678999999999999999999998754
No 242
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A
Probab=100.00 E-value=9.7e-37 Score=351.46 Aligned_cols=241 Identities=17% Similarity=0.180 Sum_probs=190.8
Q ss_pred hcCccccceecccCceEEEEEEE-cCCeEEEEEEeecC---ccccHHHHHHHH---HHHhccCCCceeeEe-------ee
Q 045553 800 TAGFNVQNCIGSGGFGATYKAEI-IPGVVVAVKRLSVG---RFQGVQQFAAEI---RTLGRVQHPNLVTLI-------GY 865 (1082)
Q Consensus 800 ~~~~~~~~~lg~G~~g~Vy~a~~-~~~~~vavK~~~~~---~~~~~~~~~~e~---~~l~~l~h~niv~l~-------~~ 865 (1082)
..+|++.+.||+|+||.||+|.. .+|+.||||++... .....+.+.+|+ +.+++++||||++++ ++
T Consensus 72 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~ 151 (377)
T 3byv_A 72 PRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDL 151 (377)
T ss_dssp CEEEEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEE
T ss_pred CceEEEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhh
Confidence 46789999999999999999974 56999999999743 334567889999 556666899999998 44
Q ss_pred eccCC-----------------eEEEEEeecCCCCHHHHHhhCC-----CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCe
Q 045553 866 HVSEA-----------------EMFLIYNYLPGGNLEKFIQDRP-----RRTVEWSMLHKIALDVARALAYLHDECVPRV 923 (1082)
Q Consensus 866 ~~~~~-----------------~~~lV~E~~~~gsL~~~l~~~~-----~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~i 923 (1082)
+.+.+ ..++||||+ +|+|.+++.... ...+++..++.|+.|++.||+|||+. +|
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~i 227 (377)
T 3byv_A 152 VKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHY---GL 227 (377)
T ss_dssp EECTTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHHT---TE
T ss_pred hhccCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHhC---Ce
Confidence 44432 379999999 689999998632 12334688889999999999999999 99
Q ss_pred EeccCCCCCEEEcCCCcEEEeecccceecCCCCCccccCcccCCCcccchhcccC-----------CCCchhhHHHHHHH
Q 045553 924 LHRDIKPSNILLDNNLNAYLSDFGLARLLGTSETHATTDVAGTFGYVAPEYAMTC-----------RVSDKADVYSFGVV 992 (1082)
Q Consensus 924 vH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----------~~~~~~Dv~slGvl 992 (1082)
+||||||+||+++.++.+||+|||+++.... ......| +.|+|||++.+. .++.++|||||||+
T Consensus 228 vHrDikp~NIll~~~~~~kL~DFG~a~~~~~----~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG~i 302 (377)
T 3byv_A 228 VHTYLRPVDIVLDQRGGVFLTGFEHLVRDGA----RVVSSVS-RGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLV 302 (377)
T ss_dssp ECSCCCGGGEEECTTCCEEECCGGGCEETTC----EEECCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHHHHHH
T ss_pred ecCCCCHHHEEEcCCCCEEEEechhheecCC----cccCCCC-cCccChhhhcccccccccccccccCChhhhHHHHHHH
Confidence 9999999999999999999999999986432 2334567 999999999887 89999999999999
Q ss_pred HHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCCCccccccccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 045553 993 LLELISDKKALDPSFCSFGNGFNIVAWASMLLLQGRPCEFFTAGLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQ 1072 (1082)
Q Consensus 993 l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~ 1072 (1082)
+|||++|+.||...... . ....+.. .....+.++.+++.+||+.||++||++.|+++
T Consensus 303 l~elltg~~Pf~~~~~~-----------------~-~~~~~~~-----~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~ 359 (377)
T 3byv_A 303 IYWIWCADLPITKDAAL-----------------G-GSEWIFR-----SCKNIPQPVRALLEGFLRYPKEDRLLPLQAME 359 (377)
T ss_dssp HHHHHHSSCCC-----------------------C-CSGGGGS-----SCCCCCHHHHHHHHHHTCSSGGGCCCHHHHHT
T ss_pred HHHHHHCCCCCcccccc-----------------c-chhhhhh-----hccCCCHHHHHHHHHHcCCCchhCCCHHHHhh
Confidence 99999999999643211 0 0111111 01233467999999999999999999999986
No 243
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...
Probab=100.00 E-value=2.7e-35 Score=333.24 Aligned_cols=257 Identities=19% Similarity=0.247 Sum_probs=201.9
Q ss_pred cCccccceecccCceEEEEEEE-cCCeEEEEEEeecCccccHHHHHHHHHHHhccC-CCceeeEeeeecc--CCeEEEEE
Q 045553 801 AGFNVQNCIGSGGFGATYKAEI-IPGVVVAVKRLSVGRFQGVQQFAAEIRTLGRVQ-HPNLVTLIGYHVS--EAEMFLIY 876 (1082)
Q Consensus 801 ~~~~~~~~lg~G~~g~Vy~a~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~--~~~~~lV~ 876 (1082)
++|++.+.||+|+||+||+|.. .+++.||||++... ..+.+.+|++++++++ ||||+++++++.+ ....++||
T Consensus 36 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~lv~ 112 (330)
T 3nsz_A 36 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPV---KKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVF 112 (330)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC---CHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCEEEEE
T ss_pred CceEEEEEecccCCeEEEEEEECCCCcEEEEEEeccc---chHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCceEEEE
Confidence 5799999999999999999965 56899999998743 3567899999999997 9999999999987 66789999
Q ss_pred eecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCC-cEEEeecccceecCCC
Q 045553 877 NYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNL-NAYLSDFGLARLLGTS 955 (1082)
Q Consensus 877 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~-~~kl~DfGla~~~~~~ 955 (1082)
||+++++|.++++. +++..+..++.|++.||+|||+. +|+||||||+||+++.++ .+||+|||+++.....
T Consensus 113 e~~~~~~l~~~~~~-----~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~ 184 (330)
T 3nsz_A 113 EHVNNTDFKQLYQT-----LTDYDIRFYMYEILKALDYCHSM---GIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPG 184 (330)
T ss_dssp ECCCCCCHHHHGGG-----CCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTTEEEECCCTTCEECCTT
T ss_pred eccCchhHHHHHHh-----CCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEEcCCCCEEEEEeCCCceEcCCC
Confidence 99999999999863 78999999999999999999999 999999999999999777 8999999999876543
Q ss_pred CCccccCcccCCCcccchhccc-CCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHH--------HHhc
Q 045553 956 ETHATTDVAGTFGYVAPEYAMT-CRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASM--------LLLQ 1026 (1082)
Q Consensus 956 ~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~--------~~~~ 1026 (1082)
.. .....|+..|+|||++.+ ..++.++||||+||++|||++|+.||...... ...+...... ....
T Consensus 185 ~~--~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~~~~~---~~~l~~~~~~~~~~~~~~~~~~ 259 (330)
T 3nsz_A 185 QE--YNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDN---YDQLVRIAKVLGTEDLYDYIDK 259 (330)
T ss_dssp CC--CCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSH---HHHHHHHHHHHCHHHHHHHHHH
T ss_pred Cc--cccccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcccCCch---HHHHHHHHHhcCCchhhhHHHH
Confidence 32 334578999999999987 67899999999999999999999999532111 0111110000 0000
Q ss_pred CC--------------CccccccccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 045553 1027 GR--------------PCEFFTAGLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQ 1073 (1082)
Q Consensus 1027 ~~--------------~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~ 1073 (1082)
.. .....+.......+...+.++.+++.+|++.||++|||+.|++++
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~h 320 (330)
T 3nsz_A 260 YNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEH 320 (330)
T ss_dssp TTCCCCTHHHHHHCCCCCCCGGGGCCTTTGGGCCHHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred hccccccchhhhhhhccccchhhhccccccccCCHHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence 00 000001111111222346789999999999999999999999874
No 244
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=100.00 E-value=1.7e-34 Score=339.83 Aligned_cols=343 Identities=18% Similarity=0.169 Sum_probs=247.8
Q ss_pred CCccccccccccCCCCCCEEEcccCCCcccCChhhcCCCCCCEEeCcCCCCCCCCCccccCCCCCCeEEccCcccccccC
Q 045553 96 DKLSGNLSRAIGDLTQLRVLLLAFNGFSGELPLEIGQLSLLEILDLSFNSFHGPIPPTLQNCSSLRLINLSGNQFNGTIP 175 (1082)
Q Consensus 96 ~~l~g~l~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p 175 (1082)
+.+.+. | .+..+++|++|+|++|++++ +| ++.+++|++|+|++|.+++ ++ ++++++|++|++++|++++ +|
T Consensus 52 n~l~~~-~-~l~~l~~L~~L~Ls~n~l~~-~~--~~~l~~L~~L~Ls~N~l~~-~~--~~~l~~L~~L~L~~N~l~~-l~ 122 (457)
T 3bz5_A 52 SSITDM-T-GIEKLTGLTKLICTSNNITT-LD--LSQNTNLTYLACDSNKLTN-LD--VTPLTKLTYLNCDTNKLTK-LD 122 (457)
T ss_dssp SCCCCC-T-TGGGCTTCSEEECCSSCCSC-CC--CTTCTTCSEEECCSSCCSC-CC--CTTCTTCCEEECCSSCCSC-CC
T ss_pred CCcccC-h-hhcccCCCCEEEccCCcCCe-Ec--cccCCCCCEEECcCCCCce-ee--cCCCCcCCEEECCCCcCCe-ec
Confidence 455553 4 68999999999999999996 45 9999999999999999996 44 8999999999999999996 44
Q ss_pred ccccCCCCCcEEEcccCcccccCCcccccccccccEEEcccCccCCCCCccccCCCCccEEEccCCcCCCCcCccccCCC
Q 045553 176 AFFGQSPGFQVVSLSFNLLSGSVPEEFGDNCVSLEHILLAANSLTGSIPPSLGNCTELRSLLLSSNMLQGDIPSSFGQLV 255 (1082)
Q Consensus 176 ~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~ 255 (1082)
++.+++|++|++++|++++ ++ + ..+++|++|++++|+..+.+ .+..+++|++|++++|++++ +| ++.++
T Consensus 123 --~~~l~~L~~L~l~~N~l~~-l~--l-~~l~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~ls~n~l~~-l~--l~~l~ 191 (457)
T 3bz5_A 123 --VSQNPLLTYLNCARNTLTE-ID--V-SHNTQLTELDCHLNKKITKL--DVTPQTQLTTLDCSFNKITE-LD--VSQNK 191 (457)
T ss_dssp --CTTCTTCCEEECTTSCCSC-CC--C-TTCTTCCEEECTTCSCCCCC--CCTTCTTCCEEECCSSCCCC-CC--CTTCT
T ss_pred --CCCCCcCCEEECCCCccce-ec--c-ccCCcCCEEECCCCCccccc--ccccCCcCCEEECCCCccce-ec--cccCC
Confidence 8999999999999999995 44 3 36899999999999766666 58899999999999999996 55 88999
Q ss_pred CCCEEeCCCCcCcccCCccccCCCCCcEEEeccccCCcccccCCCCCCcccccCCCcccccCCCCCccccCCCCCcEEEc
Q 045553 256 NLEVLDLSRNFLSGIVPSELGMCKQLKVLVLRNDYGPLYSREHGDLPIQPVVDGGEDYNFFDGGLPDSITRLPNLRVFWA 335 (1082)
Q Consensus 256 ~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~n~~~~~~~~~~~l~~~~~~~~~~~~n~~~~~~p~~l~~l~~L~~L~l 335 (1082)
+|++|++++|++++. .++.+++|++|++++
T Consensus 192 ~L~~L~l~~N~l~~~---~l~~l~~L~~L~Ls~----------------------------------------------- 221 (457)
T 3bz5_A 192 LLNRLNCDTNNITKL---DLNQNIQLTFLDCSS----------------------------------------------- 221 (457)
T ss_dssp TCCEEECCSSCCSCC---CCTTCTTCSEEECCS-----------------------------------------------
T ss_pred CCCEEECcCCcCCee---ccccCCCCCEEECcC-----------------------------------------------
Confidence 999999999999864 256666666666655
Q ss_pred CCCcccCCCCcccccccCCCeEEcCCccccCCCCccccCCCCCCEEecCCCcCcccCCCCcccCcccEEEecCCcceecC
Q 045553 336 PNLNLEGIFPQNWELCSKLEMLNLAHNFFTGQIPASLGNCKSLYFLDLSSNNLTGLLPEEVSVPCMAVFNVSQNLLSGEI 415 (1082)
Q Consensus 336 ~~n~l~~~~~~~l~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~l~~L~~L~l~~N~l~~~~ 415 (1082)
|++.++ | +..+++|++|++++|++++.. +..+++|+.|++++|++ +.|++++|++.|.+
T Consensus 222 --N~l~~i-p--~~~l~~L~~L~l~~N~l~~~~---~~~l~~L~~L~l~~n~L-------------~~L~l~~n~~~~~~ 280 (457)
T 3bz5_A 222 --NKLTEI-D--VTPLTQLTYFDCSVNPLTELD---VSTLSKLTTLHCIQTDL-------------LEIDLTHNTQLIYF 280 (457)
T ss_dssp --SCCSCC-C--CTTCTTCSEEECCSSCCSCCC---CTTCTTCCEEECTTCCC-------------SCCCCTTCTTCCEE
T ss_pred --Cccccc-C--ccccCCCCEEEeeCCcCCCcC---HHHCCCCCEEeccCCCC-------------CEEECCCCccCCcc
Confidence 444442 2 445566667777777766432 34566677777766643 34556666554333
Q ss_pred CCCCCcccccccccccccceeeeeecccccccccccCcCCCCCCCCCceeEeeccCCcccCCCCCccccCCCccccccce
Q 045553 416 PRISHSECSKMSVNWSMSQVDLIGFYTAFFYENALTSCAPFSSPSNGLFILHDFSNNLFTGPVPPFLIDSDSLSSRPYYG 495 (1082)
Q Consensus 416 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~n~~~g~~p~~~~~~~~l~~~~~~~ 495 (1082)
|.
T Consensus 281 ~~------------------------------------------------------------------------------ 282 (457)
T 3bz5_A 281 QA------------------------------------------------------------------------------ 282 (457)
T ss_dssp EC------------------------------------------------------------------------------
T ss_pred cc------------------------------------------------------------------------------
Confidence 21
Q ss_pred eeeccCCCccccCCcccccccCCceeEEEccCCcccccCCccccccCCcccEEEccCCcccccCccccCCCCCCCEEEcc
Q 045553 496 FWLSGNSLKGNLSTYPFDLCLSLDGLIFDIGNNKLIGEVPSDMGSHCKCMKFLSMAGNEFVGLIPQSFTNFDSLRNLNLS 575 (1082)
Q Consensus 496 ~~~~~n~~~~~l~~~p~~~~~~~~l~~l~l~~n~l~~~ip~~~~~~~~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~ 575 (1082)
..+.+++.|++++|.+.+.+|.. ..+|+.|++++| ++|++|+|+
T Consensus 283 -------------------~~l~~L~~L~Ls~n~~l~~l~~~----~~~L~~L~l~~~-------------~~L~~L~L~ 326 (457)
T 3bz5_A 283 -------------------EGCRKIKELDVTHNTQLYLLDCQ----AAGITELDLSQN-------------PKLVYLYLN 326 (457)
T ss_dssp -------------------TTCTTCCCCCCTTCTTCCEEECT----TCCCSCCCCTTC-------------TTCCEEECT
T ss_pred -------------------cccccCCEEECCCCcccceeccC----CCcceEechhhc-------------ccCCEEECC
Confidence 00122345556666555555532 123444444443 577888888
Q ss_pred CCCCCCCCcccccCCCCCCEEEcCCCcCCccCchhhhcCcccchhhccCcccCCCCCccccCCcccceecccCcccCCCC
Q 045553 576 RNHLQGPLPSYINKMEDLKFLSLSLNNFTGAIPWELTQLASLEVLELSANSLSGEIPSEFSKLEHLNVLRLDHNNLTGRI 655 (1082)
Q Consensus 576 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~ 655 (1082)
+|+|++. + +..+++|+.|++++|++++ ++.|..|++++|+++|. ..+..|+.++|++|+++|.+
T Consensus 327 ~N~l~~l-~--l~~l~~L~~L~l~~N~l~~--------l~~L~~L~l~~n~l~g~-----~~~~~l~~l~l~~N~l~g~i 390 (457)
T 3bz5_A 327 NTELTEL-D--VSHNTKLKSLSCVNAHIQD--------FSSVGKIPALNNNFEAE-----GQTITMPKETLTNNSLTIAV 390 (457)
T ss_dssp TCCCSCC-C--CTTCTTCSEEECCSSCCCB--------CTTGGGSSGGGTSEEEE-----EEEEECCCBCCBTTBEEEEC
T ss_pred CCccccc-c--cccCCcCcEEECCCCCCCC--------ccccccccccCCcEEec-----ceeeecCccccccCcEEEEc
Confidence 8888864 3 7778888888888888874 24567777888887764 34556677777777777777
Q ss_pred CCCC
Q 045553 656 PPGF 659 (1082)
Q Consensus 656 p~~~ 659 (1082)
|..+
T Consensus 391 p~~~ 394 (457)
T 3bz5_A 391 SPDL 394 (457)
T ss_dssp CTTC
T ss_pred ChhH
Confidence 6654
No 245
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Probab=100.00 E-value=3.2e-35 Score=327.53 Aligned_cols=252 Identities=22% Similarity=0.283 Sum_probs=206.7
Q ss_pred HhcCccccceecccCceEEEEEEEc-CCeEEEEEEeecCcc---------ccHHHHHHHHHHHhccC-CCceeeEeeeec
Q 045553 799 ATAGFNVQNCIGSGGFGATYKAEII-PGVVVAVKRLSVGRF---------QGVQQFAAEIRTLGRVQ-HPNLVTLIGYHV 867 (1082)
Q Consensus 799 ~~~~~~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~~---------~~~~~~~~e~~~l~~l~-h~niv~l~~~~~ 867 (1082)
..++|++.+.||+|+||.||+|... +|+.||||++..... ...+.+.+|++++++++ ||||+++++++.
T Consensus 15 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~ 94 (298)
T 1phk_A 15 FYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYE 94 (298)
T ss_dssp CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEE
T ss_pred hhhccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeeec
Confidence 4568999999999999999999765 689999999975431 22456789999999996 999999999999
Q ss_pred cCCeEEEEEeecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecc
Q 045553 868 SEAEMFLIYNYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFG 947 (1082)
Q Consensus 868 ~~~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG 947 (1082)
.....++||||+++++|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||
T Consensus 95 ~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg 169 (298)
T 1phk_A 95 TNTFFFLVFDLMKKGELFDYLTEK--VTLSEKETRKIMRALLEVICALHKL---NIVHRDLKPENILLDDDMNIKLTDFG 169 (298)
T ss_dssp CSSEEEEEEECCTTCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCT
T ss_pred cCCeEEEEEeccCCCcHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcceEEEcCCCcEEEeccc
Confidence 999999999999999999999873 4689999999999999999999999 99999999999999999999999999
Q ss_pred cceecCCCCCccccCcccCCCcccchhcc------cCCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHH
Q 045553 948 LARLLGTSETHATTDVAGTFGYVAPEYAM------TCRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWAS 1021 (1082)
Q Consensus 948 la~~~~~~~~~~~~~~~gt~~y~aPE~~~------~~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~ 1021 (1082)
.+....... ......|++.|+|||++. ...++.++||||||+++|||++|+.||... .......
T Consensus 170 ~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~--------~~~~~~~ 239 (298)
T 1phk_A 170 FSCQLDPGE--KLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHR--------KQMLMLR 239 (298)
T ss_dssp TCEECCTTC--CBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCS--------SHHHHHH
T ss_pred chhhcCCCc--ccccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcCc--------cHHHHHH
Confidence 998765433 233457899999999985 456789999999999999999999998632 1222222
Q ss_pred HHHhcCCCccccccccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 045553 1022 MLLLQGRPCEFFTAGLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQ 1072 (1082)
Q Consensus 1022 ~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~ 1072 (1082)
...... ... ........+..+.+++.+|++.||++||++.|+++
T Consensus 240 ~~~~~~-~~~------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 283 (298)
T 1phk_A 240 MIMSGN-YQF------GSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALA 283 (298)
T ss_dssp HHHHTC-CCC------CTTTGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTT
T ss_pred HHhcCC-ccc------CcccccccCHHHHHHHHHHccCCcccCCCHHHHHh
Confidence 222221 110 00111244568999999999999999999999986
No 246
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=100.00 E-value=5.6e-36 Score=349.37 Aligned_cols=253 Identities=20% Similarity=0.337 Sum_probs=194.1
Q ss_pred HhcCccccceecccCceEEEEEEEc-CCeEEEEEEeecCcc--------ccHHHHHHHHHHHhccCCCceeeEeeeeccC
Q 045553 799 ATAGFNVQNCIGSGGFGATYKAEII-PGVVVAVKRLSVGRF--------QGVQQFAAEIRTLGRVQHPNLVTLIGYHVSE 869 (1082)
Q Consensus 799 ~~~~~~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~~--------~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~ 869 (1082)
..++|.+.+.||+|+||+||+|... +++.||||++..... .....+.+|++++++++||||+++++++..
T Consensus 133 ~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~- 211 (419)
T 3i6u_A 133 LRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDA- 211 (419)
T ss_dssp HHTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEES-
T ss_pred hhccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEec-
Confidence 4678999999999999999999654 589999999875421 122347899999999999999999999754
Q ss_pred CeEEEEEeecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCC---CcEEEeec
Q 045553 870 AEMFLIYNYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNN---LNAYLSDF 946 (1082)
Q Consensus 870 ~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~---~~~kl~Df 946 (1082)
+..++||||+++|+|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.+ +.+||+||
T Consensus 212 ~~~~lv~e~~~~g~L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~LH~~---~ivHrDlkp~NIll~~~~~~~~~kl~DF 286 (419)
T 3i6u_A 212 EDYYIVLELMEGGELFDKVVGN--KRLKEATCKLYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDF 286 (419)
T ss_dssp SEEEEEEECCTTCBGGGGTSSS--CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESSSSSSCCEEECCS
T ss_pred CceEEEEEcCCCCcHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEecCCCcceEEEeec
Confidence 5589999999999999998763 5699999999999999999999999 99999999999999754 45999999
Q ss_pred ccceecCCCCCccccCcccCCCcccchhccc---CCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHH
Q 045553 947 GLARLLGTSETHATTDVAGTFGYVAPEYAMT---CRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASML 1023 (1082)
Q Consensus 947 Gla~~~~~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 1023 (1082)
|+++..... .......||+.|+|||++.+ ..++.++||||+||++|||++|+.||..... ...... .
T Consensus 287 G~a~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~----~~~~~~----~ 356 (419)
T 3i6u_A 287 GHSKILGET--SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRT----QVSLKD----Q 356 (419)
T ss_dssp STTTSCC-------------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSS----SCCHHH----H
T ss_pred ccceecCCC--ccccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCcc----hHHHHH----H
Confidence 999876432 23345679999999999863 6788899999999999999999999974321 112222 1
Q ss_pred HhcCCCccccccccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 045553 1024 LLQGRPCEFFTAGLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQ 1073 (1082)
Q Consensus 1024 ~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~ 1073 (1082)
+..+..... +.. ....+..+.+++.+|++.||++||++.|++++
T Consensus 357 i~~~~~~~~--~~~----~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~h 400 (419)
T 3i6u_A 357 ITSGKYNFI--PEV----WAEVSEKALDLVKKLLVVDPKARFTTEEALRH 400 (419)
T ss_dssp HHTTCCCCC--HHH----HTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred HhcCCCCCC--chh----hcccCHHHHHHHHHHccCChhHCcCHHHHhCC
Confidence 222211100 000 01235679999999999999999999999874
No 247
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*
Probab=100.00 E-value=2.6e-35 Score=344.57 Aligned_cols=197 Identities=26% Similarity=0.353 Sum_probs=173.8
Q ss_pred hcCccccceecccCceEEEEEEEc-CCeEEEEEEeecCccccHHHHHHHHHHHhcc------CCCceeeEeeeeccCCeE
Q 045553 800 TAGFNVQNCIGSGGFGATYKAEII-PGVVVAVKRLSVGRFQGVQQFAAEIRTLGRV------QHPNLVTLIGYHVSEAEM 872 (1082)
Q Consensus 800 ~~~~~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l------~h~niv~l~~~~~~~~~~ 872 (1082)
..+|++.+.||+|+||+||+|... +++.||||++.... ...+++.+|+++++.+ +|+||+++++++......
T Consensus 96 ~~ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~ 174 (429)
T 3kvw_A 96 AYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEK-RFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHI 174 (429)
T ss_dssp TTTEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEETTEE
T ss_pred cCcEEEEEEcccCccEEEEEEEECCCCcEEEEEEECCcc-chHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccCCeE
Confidence 457999999999999999999654 58999999997542 3345677888888777 577999999999999999
Q ss_pred EEEEeecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCc--EEEeecccce
Q 045553 873 FLIYNYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLN--AYLSDFGLAR 950 (1082)
Q Consensus 873 ~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~--~kl~DfGla~ 950 (1082)
++||||+. ++|.+++.......+++..+..++.|++.||+|||+. +|+||||||+||+++.++. +||+|||++.
T Consensus 175 ~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlKp~NILl~~~~~~~vkL~DFG~a~ 250 (429)
T 3kvw_A 175 CMTFELLS-MNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKN---RIIHCDLKPENILLKQQGRSGIKVIDFGSSC 250 (429)
T ss_dssp EEEECCCC-CBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHH---TEECSCCSGGGEEESSTTSCCEEECCCTTCE
T ss_pred EEEEeccC-CCHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEEccCCCcceEEeecccce
Confidence 99999995 7999999987666799999999999999999999999 9999999999999999887 9999999997
Q ss_pred ecCCCCCccccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHhCCCCCCC
Q 045553 951 LLGTSETHATTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELISDKKALDP 1005 (1082)
Q Consensus 951 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~elltg~~p~~~ 1005 (1082)
..... .....||+.|+|||++.+..++.++|||||||++|||++|+.||..
T Consensus 251 ~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~ 301 (429)
T 3kvw_A 251 YEHQR----VYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPG 301 (429)
T ss_dssp ETTCC----CCSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred ecCCc----ccccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCCCCCC
Confidence 65432 2345789999999999999999999999999999999999999974
No 248
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=100.00 E-value=4.9e-35 Score=350.36 Aligned_cols=252 Identities=24% Similarity=0.361 Sum_probs=204.4
Q ss_pred HhcCccccceecccCceEEEEEEEc-CCeEEEEEEeecCcc-------------ccHHHHHHHHHHHhccCCCceeeEee
Q 045553 799 ATAGFNVQNCIGSGGFGATYKAEII-PGVVVAVKRLSVGRF-------------QGVQQFAAEIRTLGRVQHPNLVTLIG 864 (1082)
Q Consensus 799 ~~~~~~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~~-------------~~~~~~~~e~~~l~~l~h~niv~l~~ 864 (1082)
..++|++.++||+|+||+||+|... +++.||||++..... ...+.+.+|++++++++||||+++++
T Consensus 34 i~~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~ 113 (504)
T 3q5i_A 34 IGESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFD 113 (504)
T ss_dssp GGGTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEE
T ss_pred cccceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEE
Confidence 4578999999999999999999765 578999999975431 23567899999999999999999999
Q ss_pred eeccCCeEEEEEeecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCC---cE
Q 045553 865 YHVSEAEMFLIYNYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNL---NA 941 (1082)
Q Consensus 865 ~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~---~~ 941 (1082)
++.+....++||||+++|+|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++ .+
T Consensus 114 ~~~~~~~~~lv~e~~~gg~L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~ 188 (504)
T 3q5i_A 114 VFEDKKYFYLVTEFYEGGELFEQIINR--HKFDECDAANIMKQILSGICYLHKH---NIVHRDIKPENILLENKNSLLNI 188 (504)
T ss_dssp EEECSSEEEEEEECCTTCBHHHHHHHH--SCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESSTTCCSSE
T ss_pred EEEcCCEEEEEEecCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCcHHHEEEecCCCCccE
Confidence 999999999999999999999999764 4699999999999999999999999 999999999999998775 69
Q ss_pred EEeecccceecCCCCCccccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHH
Q 045553 942 YLSDFGLARLLGTSETHATTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWAS 1021 (1082)
Q Consensus 942 kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~ 1021 (1082)
||+|||+++.+.... ......||+.|+|||++.+ .++.++||||+||++|+|++|+.||... ...+...
T Consensus 189 kl~Dfg~a~~~~~~~--~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~--------~~~~~~~ 257 (504)
T 3q5i_A 189 KIVDFGLSSFFSKDY--KLRDRLGTAYYIAPEVLKK-KYNEKCDVWSCGVIMYILLCGYPPFGGQ--------NDQDIIK 257 (504)
T ss_dssp EECCCTTCEECCTTS--CBCCCCSCTTTCCHHHHTT-CBCTHHHHHHHHHHHHHHHHSSCSSCCS--------SHHHHHH
T ss_pred EEEECCCCEEcCCCC--ccccccCCcCCCCHHHhcc-CCCchHHHHHHHHHHHHHHhCCCCCCCC--------CHHHHHH
Confidence 999999998775432 2344579999999999874 6899999999999999999999999732 2233333
Q ss_pred HHHhcCCCccccccccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 045553 1022 MLLLQGRPCEFFTAGLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQ 1073 (1082)
Q Consensus 1022 ~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~ 1073 (1082)
........... ... ...+.++.+++.+|++.||.+|||+.|++++
T Consensus 258 ~i~~~~~~~~~---~~~----~~~s~~~~~li~~~L~~dp~~R~t~~e~l~h 302 (504)
T 3q5i_A 258 KVEKGKYYFDF---NDW----KNISDEAKELIKLMLTYDYNKRCTAEEALNS 302 (504)
T ss_dssp HHHHCCCCCCH---HHH----TTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred HHHcCCCCCCc---ccc----CCCCHHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence 33322211100 000 1234679999999999999999999999864
No 249
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A
Probab=100.00 E-value=1.9e-35 Score=327.87 Aligned_cols=252 Identities=24% Similarity=0.341 Sum_probs=190.1
Q ss_pred hcCccccceecccCceEEEEEEE-cCCeEEEEEEeecCcc--ccHHHHHHHHHHHhccCCCceeeEeeeeccCCeEEEEE
Q 045553 800 TAGFNVQNCIGSGGFGATYKAEI-IPGVVVAVKRLSVGRF--QGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFLIY 876 (1082)
Q Consensus 800 ~~~~~~~~~lg~G~~g~Vy~a~~-~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 876 (1082)
.++|++.+.||+|+||+||+|.. .+|+.||||++..... ...+.+.++...++.++||||+++++++.+.+..++||
T Consensus 6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~~~~lv~ 85 (290)
T 3fme_A 6 ADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICM 85 (290)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSSEEEEE
T ss_pred HHhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccCCEEEEE
Confidence 46799999999999999999976 4689999999975432 22334455566688899999999999999999999999
Q ss_pred eecCCCCHHHHHhhC--CCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCC
Q 045553 877 NYLPGGNLEKFIQDR--PRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGT 954 (1082)
Q Consensus 877 E~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~ 954 (1082)
||++ |+|.+++... ....+++..+..++.|++.|++|||+.+ +|+||||||+||+++.++.+||+|||+++....
T Consensus 86 e~~~-~~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~--~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 162 (290)
T 3fme_A 86 ELMD-TSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKL--SVIHRDVKPSNVLINALGQVKMCDFGISGYLVD 162 (290)
T ss_dssp ECCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHS--CCCCCCCSGGGCEECTTCCEEBCCC--------
T ss_pred ehhc-cchHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcC--CeecCCCCHHHEEECCCCCEEEeecCCcccccc
Confidence 9996 5888887642 2467999999999999999999999853 899999999999999999999999999987644
Q ss_pred CCCccccCcccCCCcccchhc----ccCCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCCCc
Q 045553 955 SETHATTDVAGTFGYVAPEYA----MTCRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQGRPC 1030 (1082)
Q Consensus 955 ~~~~~~~~~~gt~~y~aPE~~----~~~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1030 (1082)
... .....|++.|+|||++ .+..++.++||||+|+++|||++|+.||.... ................
T Consensus 163 ~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~-------~~~~~~~~~~~~~~~~ 233 (290)
T 3fme_A 163 DVA--KDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWG-------TPFQQLKQVVEEPSPQ 233 (290)
T ss_dssp ---------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCS-------CHHHHHHHHHHSCCCC
T ss_pred ccc--ccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccC-------chHHHHHHHhccCCCC
Confidence 322 2334689999999996 56678999999999999999999999996321 1222223333322111
Q ss_pred cccccccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 045553 1031 EFFTAGLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQ 1072 (1082)
Q Consensus 1031 ~~~d~~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~ 1072 (1082)
..+...+.++.+++.+|++.+|++|||+.|+++
T Consensus 234 ---------~~~~~~~~~~~~li~~~l~~~p~~Rpt~~e~l~ 266 (290)
T 3fme_A 234 ---------LPADKFSAEFVDFTSQCLKKNSKERPTYPELMQ 266 (290)
T ss_dssp ---------CCTTTSCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred ---------cccccCCHHHHHHHHHHhhcChhhCcCHHHHHh
Confidence 111234567999999999999999999999987
No 250
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*
Probab=100.00 E-value=8.8e-36 Score=342.76 Aligned_cols=252 Identities=11% Similarity=0.043 Sum_probs=182.2
Q ss_pred cCccccceecccCceEEEEEEEc-CCeEEEEEEeecCcc---ccHHHHHHHH---HHHhccCCCceeeEee-------ee
Q 045553 801 AGFNVQNCIGSGGFGATYKAEII-PGVVVAVKRLSVGRF---QGVQQFAAEI---RTLGRVQHPNLVTLIG-------YH 866 (1082)
Q Consensus 801 ~~~~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~~---~~~~~~~~e~---~~l~~l~h~niv~l~~-------~~ 866 (1082)
..|++.+.||+|+||.||+|... +|+.||||++..... ...+.+.+|+ +.++. +|||+++++. ++
T Consensus 62 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~-~hp~iv~~~~~~~~p~d~~ 140 (371)
T 3q60_A 62 RKLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLG-ESPEEARDRRRLLLPSDAV 140 (371)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC-----------CBCCCCEEE
T ss_pred eeeeeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcc-cChhhhhhceeEEeeehhe
Confidence 45889999999999999999765 789999999987543 3345677784 45555 7999888553 22
Q ss_pred ccC-----------------CeEEEEEeecCCCCHHHHHhhCCCCCCCHHHH------HHHHHHHHHHHHHHhhCCCCCe
Q 045553 867 VSE-----------------AEMFLIYNYLPGGNLEKFIQDRPRRTVEWSML------HKIALDVARALAYLHDECVPRV 923 (1082)
Q Consensus 867 ~~~-----------------~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~------~~i~~~i~~~L~~LH~~~~~~i 923 (1082)
... ...++||||++ |+|.+++.... ..+++..+ ..++.|++.||+|||+. +|
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~-~~~~~~~~~~~~vk~~i~~qi~~aL~~LH~~---~i 215 (371)
T 3q60_A 141 AVQSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTLD-FVYVFRGDEGILALHILTAQLIRLAANLQSK---GL 215 (371)
T ss_dssp EETTSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHHH-HSCCCCHHHHHHHHHHHHHHHHHHHHHHHHT---TE
T ss_pred ecCCCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHhc-cccchhhhhhhhhHHHHHHHHHHHHHHHHHC---CC
Confidence 221 34899999998 89999998642 23455566 78889999999999999 99
Q ss_pred EeccCCCCCEEEcCCCcEEEeecccceecCCCCCccccCcccCCCcccchhccc--CCCCchhhHHHHHHHHHHHHhCCC
Q 045553 924 LHRDIKPSNILLDNNLNAYLSDFGLARLLGTSETHATTDVAGTFGYVAPEYAMT--CRVSDKADVYSFGVVLLELISDKK 1001 (1082)
Q Consensus 924 vH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~Dv~slGvll~elltg~~ 1001 (1082)
+||||||+|||++.++.+||+|||+++...... ....+|+.|+|||++.+ ..++.++|||||||++|||++|+.
T Consensus 216 vHrDikp~NIll~~~~~~kL~DFG~a~~~~~~~----~~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il~elltg~~ 291 (371)
T 3q60_A 216 VHGHFTPDNLFIMPDGRLMLGDVSALWKVGTRG----PASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLFL 291 (371)
T ss_dssp EETTCSGGGEEECTTSCEEECCGGGEEETTCEE----EGGGSCGGGCCHHHHTCSEEECCHHHHHHHHHHHHHHHHHSSC
T ss_pred ccCcCCHHHEEECCCCCEEEEecceeeecCCCc----cCccCCcCCcChhhccCCCCCcCccccHHHHHHHHHHHHhCCC
Confidence 999999999999999999999999998764322 13456799999999987 789999999999999999999999
Q ss_pred CCCCCccCCCCCccHHHHHHHHHhcCCCccccccccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 045553 1002 ALDPSFCSFGNGFNIVAWASMLLLQGRPCEFFTAGLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQ 1072 (1082)
Q Consensus 1002 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~ 1072 (1082)
||........... .....................+..+.+++.+||+.||++||++.|+++
T Consensus 292 Pf~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 352 (371)
T 3q60_A 292 PFGLVTPGIKGSW----------KRPSLRVPGTDSLAFGSCTPLPDFVKTLIGRFLNFDRRRRLLPLEAME 352 (371)
T ss_dssp STTBCCTTCTTCC----------CBCCTTSCCCCSCCCTTSSCCCHHHHHHHHHHTCSSTTTCCCHHHHTT
T ss_pred CCCCcCcccccch----------hhhhhhhccccccchhhccCCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 9986532210000 000000000111111112345678999999999999999999999975
No 251
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=100.00 E-value=1e-34 Score=346.05 Aligned_cols=171 Identities=22% Similarity=0.225 Sum_probs=95.1
Q ss_pred EEEcccCCCcccCChhhcCCCCCCEEeCcCCCCCCCCCccccCCCCCCeEEccCcccccccCccccCCCCCcEEEcccCc
Q 045553 114 VLLLAFNGFSGELPLEIGQLSLLEILDLSFNSFHGPIPPTLQNCSSLRLINLSGNQFNGTIPAFFGQSPGFQVVSLSFNL 193 (1082)
Q Consensus 114 ~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~ 193 (1082)
.++.++++++ .+|..+. ++|+.|+|++|.+++..|..|.++++|++|+|++|++++..|..|.++++|++|+|++|+
T Consensus 15 ~v~c~~~~l~-~ip~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~ 91 (477)
T 2id5_A 15 AVLCHRKRFV-AVPEGIP--TETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNR 91 (477)
T ss_dssp EEECCSCCCS-SCCSCCC--TTCSEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSC
T ss_pred EEEeCCCCcC-cCCCCCC--CCCcEEECCCCccceECHhHccCCCCCCEEECCCCccCEeChhhhhCCccCCEEECCCCc
Confidence 4555555555 4454332 456666666666665555556666666666666666665555666666666666666666
Q ss_pred ccccCCcccccccccccEEEcccCccCCCCCccccCCCCccEEEccCCcCCCCcCccccCCCCCCEEeCCCCcCcccCCc
Q 045553 194 LSGSVPEEFGDNCVSLEHILLAANSLTGSIPPSLGNCTELRSLLLSSNMLQGDIPSSFGQLVNLEVLDLSRNFLSGIVPS 273 (1082)
Q Consensus 194 l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~ 273 (1082)
++ .+|...+..+++|++|+|++|++++..+..|.++++|++|+|++|.+++..+..|..+++|++|+|++|++++..+.
T Consensus 92 l~-~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~ 170 (477)
T 2id5_A 92 LK-LIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTE 170 (477)
T ss_dssp CC-SCCTTSSTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEECCTTCCEECTTSSTTCTTCCEEEEESCCCSSCCHH
T ss_pred CC-ccCcccccCCCCCCEEECCCCccccCChhHccccccCCEEECCCCccceeChhhccCCCCCCEEECCCCcCcccChh
Confidence 55 44444333455555555555555555555555555566666665555555555555555555555555555544444
Q ss_pred cccCCCCCcEEEecc
Q 045553 274 ELGMCKQLKVLVLRN 288 (1082)
Q Consensus 274 ~l~~l~~L~~L~l~~ 288 (1082)
.+..+++|+.|++++
T Consensus 171 ~l~~l~~L~~L~l~~ 185 (477)
T 2id5_A 171 ALSHLHGLIVLRLRH 185 (477)
T ss_dssp HHTTCTTCCEEEEES
T ss_pred HhcccCCCcEEeCCC
Confidence 444455555444444
No 252
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B
Probab=100.00 E-value=3.2e-35 Score=332.06 Aligned_cols=265 Identities=25% Similarity=0.334 Sum_probs=204.4
Q ss_pred HHhcCccccceecccCceEEEEEEE--cCCeEEEEEEeecCcc--ccHHHHHHHHHHHhcc---CCCceeeEeeeec---
Q 045553 798 RATAGFNVQNCIGSGGFGATYKAEI--IPGVVVAVKRLSVGRF--QGVQQFAAEIRTLGRV---QHPNLVTLIGYHV--- 867 (1082)
Q Consensus 798 ~~~~~~~~~~~lg~G~~g~Vy~a~~--~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l---~h~niv~l~~~~~--- 867 (1082)
++.++|++.+.||+|+||.||+|.. .+|+.||+|++..... .....+.+|+.+++.+ +||||+++++++.
T Consensus 8 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~ 87 (326)
T 1blx_A 8 RADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSR 87 (326)
T ss_dssp CGGGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEE
T ss_pred CchhceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeecc
Confidence 3567899999999999999999987 4689999999864322 1223456677776666 8999999999987
Q ss_pred --cCCeEEEEEeecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEee
Q 045553 868 --SEAEMFLIYNYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSD 945 (1082)
Q Consensus 868 --~~~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~D 945 (1082)
.....++||||++ |+|.+++.......+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|
T Consensus 88 ~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---gi~H~dlkp~Nili~~~~~~kl~D 163 (326)
T 1blx_A 88 TDRETKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLAD 163 (326)
T ss_dssp CSSEEEEEEEEECCS-CBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECS
T ss_pred cCCCceEEEEEecCC-CCHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCCHHHeEEcCCCCEEEec
Confidence 5677899999996 6999999987666799999999999999999999999 999999999999999999999999
Q ss_pred cccceecCCCCCccccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHh
Q 045553 946 FGLARLLGTSETHATTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLL 1025 (1082)
Q Consensus 946 fGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 1025 (1082)
||.++...... ......|+..|+|||++.+..++.++||||||+++|||++|+.||..... ......+.....
T Consensus 164 fg~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~-----~~~~~~i~~~~~ 236 (326)
T 1blx_A 164 FGLARIYSFQM--ALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSD-----VDQLGKILDVIG 236 (326)
T ss_dssp CCSCCCCCGGG--GGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSH-----HHHHHHHHHHHC
T ss_pred CcccccccCCC--CccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCH-----HHHHHHHHHHcC
Confidence 99998764322 23446789999999999999999999999999999999999999974311 111111111111
Q ss_pred cCCCcccc----------cc---ccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 045553 1026 QGRPCEFF----------TA---GLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQ 1073 (1082)
Q Consensus 1026 ~~~~~~~~----------d~---~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~ 1073 (1082)
......+. .. ..........+..+.+++.+|++.||++||++.|++++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 297 (326)
T 1blx_A 237 LPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSH 297 (326)
T ss_dssp CCCGGGSCTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred CCCcccCccccccchhhhcccCcchhhhccccCCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence 11000000 00 00001122345688999999999999999999999854
No 253
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition state, activation helix, serine/threonine-PR kinase; HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Probab=100.00 E-value=2.5e-35 Score=334.98 Aligned_cols=252 Identities=25% Similarity=0.374 Sum_probs=200.9
Q ss_pred hcCccccceecccCceEEEEEEE-cCCeEEEEEEeecCcc-ccHHHHHHHHHH-HhccCCCceeeEeeeeccCCeEEEEE
Q 045553 800 TAGFNVQNCIGSGGFGATYKAEI-IPGVVVAVKRLSVGRF-QGVQQFAAEIRT-LGRVQHPNLVTLIGYHVSEAEMFLIY 876 (1082)
Q Consensus 800 ~~~~~~~~~lg~G~~g~Vy~a~~-~~~~~vavK~~~~~~~-~~~~~~~~e~~~-l~~l~h~niv~l~~~~~~~~~~~lV~ 876 (1082)
..+|++.+.||+|+||.||+|.. .+|+.||||++..... ....++..|... ++.++||||+++++++.+.+..++||
T Consensus 50 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~~~~~~~~~~~~~lv~ 129 (340)
T 3an0_A 50 ADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICM 129 (340)
T ss_dssp SSCEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCCCCHHHHHHHHHHHHHHTTCCCTTTCCEEEEEECSSCEEEEE
T ss_pred hhheeEeeEecccCCEEEEEEEEcCCCCEEEEEEeccccCcHHHHHHHHHHHHHHhhcCCCcEEEEeeEEEeCCcEEEEH
Confidence 46789999999999999999975 4689999999975432 334455556555 78889999999999999999999999
Q ss_pred eecCCCCHHHHHhhC--CCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCC
Q 045553 877 NYLPGGNLEKFIQDR--PRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGT 954 (1082)
Q Consensus 877 E~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~ 954 (1082)
||++ |+|.+++... ....+++..+..++.|++.||+|||+.+ +|+||||||+||+++.++.+||+|||+++....
T Consensus 130 e~~~-~~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~--~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~ 206 (340)
T 3an0_A 130 ELMD-TSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKL--SVIHRDVKPSNVLINALGQVKMCDFGISGYLVD 206 (340)
T ss_dssp CCCS-EEHHHHHHHHHHTSCCCCHHHHHHHHHHHHHHHHHHHHHT--CCCCCSCCSTTEEECSTTCEEECCCSHHHHHSC
T ss_pred HHhh-CcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcC--CeecCCCCHHHEEECCCCCEEEeeCCCceeccc
Confidence 9996 4999988742 3567999999999999999999999743 899999999999999999999999999987643
Q ss_pred CCCccccCcccCCCcccchhcc----cCCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCCCc
Q 045553 955 SETHATTDVAGTFGYVAPEYAM----TCRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQGRPC 1030 (1082)
Q Consensus 955 ~~~~~~~~~~gt~~y~aPE~~~----~~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1030 (1082)
. .......||+.|+|||++. ...++.++|||||||++|||++|+.||.... .....+..........
T Consensus 207 ~--~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~tg~~p~~~~~-------~~~~~~~~~~~~~~~~ 277 (340)
T 3an0_A 207 S--VAKTIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWG-------TPFQQLKQVVEEPSPQ 277 (340)
T ss_dssp H--HHHHHSSCCCCCCCHHHHSCCTTCCSCCHHHHHHHHHHHHHHHHHTSCSSCCCS-------CHHHHHHHHHHSCCCC
T ss_pred c--cccccCCCCccccCccccccccccCCCCchhhHHHHHHHHHHHHHCCCCCcccc-------chHHHHHHHhcCCCCC
Confidence 2 1222346999999999964 3478999999999999999999999997421 1122233333322111
Q ss_pred cccccccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 045553 1031 EFFTAGLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQ 1072 (1082)
Q Consensus 1031 ~~~d~~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~ 1072 (1082)
. .+...+.++.+++.+||+.||++||++.||++
T Consensus 278 -~--------~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 310 (340)
T 3an0_A 278 -L--------PADKFSAEFVDFTSQCLKKNSKERPTYPELMQ 310 (340)
T ss_dssp -C--------CGGGSCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred -C--------CcccCCHHHHHHHHHHccCCcccCcCHHHHhc
Confidence 0 11234568999999999999999999999987
No 254
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...
Probab=100.00 E-value=2.1e-35 Score=339.30 Aligned_cols=256 Identities=25% Similarity=0.353 Sum_probs=193.2
Q ss_pred hcCccccceecccCceEEEEEEEc-CCeEEEEEEeecCc--cccHHHHHHHHHHHhccCCCceeeEeeeeccCC------
Q 045553 800 TAGFNVQNCIGSGGFGATYKAEII-PGVVVAVKRLSVGR--FQGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEA------ 870 (1082)
Q Consensus 800 ~~~~~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~------ 870 (1082)
.++|++.+.||+|+||.||+|... +++.||||++.... ....+.+.+|+.+++.++||||+++++++....
T Consensus 24 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~ 103 (371)
T 2xrw_A 24 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQ 103 (371)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTCC
T ss_pred hhheeEeeeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeecccccccccc
Confidence 468999999999999999999654 68999999997542 334567889999999999999999999987654
Q ss_pred eEEEEEeecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccce
Q 045553 871 EMFLIYNYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLAR 950 (1082)
Q Consensus 871 ~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~ 950 (1082)
..++||||++ ++|.+++.. .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++
T Consensus 104 ~~~lv~e~~~-~~l~~~~~~----~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~ 175 (371)
T 2xrw_A 104 DVYIVMELMD-ANLCQVIQM----ELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLAR 175 (371)
T ss_dssp EEEEEEECCS-EEHHHHHHS----CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECCCCC--
T ss_pred ceEEEEEcCC-CCHHHHHhh----ccCHHHHHHHHHHHHHHHHHHHHC---CeecccCCHHHEEEcCCCCEEEEEeeccc
Confidence 7899999996 588888863 489999999999999999999999 99999999999999999999999999998
Q ss_pred ecCCCCCccccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhc-CCC
Q 045553 951 LLGTSETHATTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQ-GRP 1029 (1082)
Q Consensus 951 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 1029 (1082)
...... ......||+.|+|||++.+..++.++||||+||++|||++|+.||.... ....+ ...... +..
T Consensus 176 ~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~-------~~~~~-~~i~~~~~~~ 245 (371)
T 2xrw_A 176 TAGTSF--MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTD-------HIDQW-NKVIEQLGTP 245 (371)
T ss_dssp ----------------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSS-------HHHHH-HHHHC-CCCC
T ss_pred cccccc--ccCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCC-------HHHHH-HHHHHHhCCC
Confidence 764322 2334679999999999999999999999999999999999999997431 11111 111111 000
Q ss_pred c-cc--------------------------cccccCCCC---ChHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 045553 1030 C-EF--------------------------FTAGLWDCG---PHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQ 1073 (1082)
Q Consensus 1030 ~-~~--------------------------~d~~l~~~~---~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~ 1073 (1082)
. +. +........ +......+.+++.+|++.||++|||+.|++++
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~h 319 (371)
T 2xrw_A 246 CPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQH 319 (371)
T ss_dssp CHHHHTTSCHHHHHHHHSSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSGGGSCCHHHHHHS
T ss_pred CHHHHHHhhhHHHHHHhhCccccccchhhhcccccCcccccccccccHHHHHHHHHHCcCChhhCCCHHHHhCC
Confidence 0 00 000000000 11236789999999999999999999999874
No 255
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}
Probab=100.00 E-value=1.9e-35 Score=342.09 Aligned_cols=256 Identities=23% Similarity=0.350 Sum_probs=195.0
Q ss_pred hcCccccceecccCceEEEEEEEcCCeEEEEEEeecCccccHHHHHHHHHHHhccCCCceeeEeeeeccCC------eEE
Q 045553 800 TAGFNVQNCIGSGGFGATYKAEIIPGVVVAVKRLSVGRFQGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEA------EMF 873 (1082)
Q Consensus 800 ~~~~~~~~~lg~G~~g~Vy~a~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~------~~~ 873 (1082)
..+|++.+.||+|+||+||+|+...+..||+|++...... ..+|+++++.++||||+++++++.... ..+
T Consensus 39 ~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~aikk~~~~~~~----~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~~~ 114 (394)
T 4e7w_A 39 EIAYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKRF----KNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLN 114 (394)
T ss_dssp EEEEEEEEEEEEETTEEEEEEEETTTEEEEEEEEECCTTS----CCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEEEE
T ss_pred cceEEEeEEEeeCCCeEEEEEEECCCCeEEEEEEecCcch----HHHHHHHHHhCCCCCcceEEEEEEecCCCCCceEEE
Confidence 3469999999999999999999887778999998654322 247999999999999999999985433 378
Q ss_pred EEEeecCCCCHHHHHhh--CCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEc-CCCcEEEeecccce
Q 045553 874 LIYNYLPGGNLEKFIQD--RPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLD-NNLNAYLSDFGLAR 950 (1082)
Q Consensus 874 lV~E~~~~gsL~~~l~~--~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~-~~~~~kl~DfGla~ 950 (1082)
+||||++++ +.+.+.. .....+++..+..++.|+++||+|||+. +|+||||||+||+++ .++.+||+|||+++
T Consensus 115 lv~e~~~~~-l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~~kL~DFG~a~ 190 (394)
T 4e7w_A 115 LVLEYVPET-VYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSI---GICHRDIKPQNLLLDPPSGVLKLIDFGSAK 190 (394)
T ss_dssp EEEECCSEE-HHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEETTTTEEEECCCTTCE
T ss_pred EEeeccCcc-HHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHEEEcCCCCcEEEeeCCCcc
Confidence 999999764 4443332 1245799999999999999999999999 999999999999999 79999999999998
Q ss_pred ecCCCCCccccCcccCCCcccchhcccC-CCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHh-cCC
Q 045553 951 LLGTSETHATTDVAGTFGYVAPEYAMTC-RVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLL-QGR 1028 (1082)
Q Consensus 951 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~-~~~ 1028 (1082)
....... .....||+.|+|||++.+. .++.++||||+||++|||++|+.||.... ..+....... .+.
T Consensus 191 ~~~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~--------~~~~l~~i~~~~g~ 260 (394)
T 4e7w_A 191 ILIAGEP--NVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGES--------GIDQLVEIIKVLGT 260 (394)
T ss_dssp ECCTTCC--CCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSS--------HHHHHHHHHHHHCC
T ss_pred cccCCCC--CcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC--------HHHHHHHHHHHhCC
Confidence 7644332 2345789999999998765 58999999999999999999999997421 1111111111 000
Q ss_pred Cc---------cccc---cccCC-----CCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 045553 1029 PC---------EFFT---AGLWD-----CGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQ 1073 (1082)
Q Consensus 1029 ~~---------~~~d---~~l~~-----~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~ 1073 (1082)
.. ...+ +.... ..+...+.++.+++.+|++.||++|||+.|++++
T Consensus 261 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 322 (394)
T 4e7w_A 261 PSREQIKTMNPNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALCH 322 (394)
T ss_dssp CCHHHHHHHCGGGSSSCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred CCHHHHHhhChhhhhhccccccCCcHHHhccccCCHHHHHHHHHHhCCChhhCCCHHHHhcC
Confidence 00 0000 00000 0122345689999999999999999999999875
No 256
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}
Probab=100.00 E-value=7.3e-36 Score=336.19 Aligned_cols=258 Identities=21% Similarity=0.363 Sum_probs=202.7
Q ss_pred HhcCccccceecccCceEEEEEEEcCCeEEEEEEeecCc--cccHHHHHHHHHHHhccCCCceeeEeeeeccCCeEEEEE
Q 045553 799 ATAGFNVQNCIGSGGFGATYKAEIIPGVVVAVKRLSVGR--FQGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFLIY 876 (1082)
Q Consensus 799 ~~~~~~~~~~lg~G~~g~Vy~a~~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 876 (1082)
..++|++.+.||+|+||.||+|.... .||+|++.... ....+.+.+|++++++++||||+++++++.+.+..++||
T Consensus 31 ~~~~~~~~~~lg~G~~g~V~~~~~~~--~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~iv~ 108 (319)
T 2y4i_B 31 PFEQLEIGELIGKGRFGQVYHGRWHG--EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPPHLAIIT 108 (319)
T ss_dssp CCSCEECCCBCCCSSSSEEEEEEESS--SEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEECSSCEEEEC
T ss_pred CHHHeEEeeEeccCCceEEEEEEEcC--eEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCceEEEe
Confidence 45689999999999999999998753 59999986543 223456788999999999999999999999999999999
Q ss_pred eecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCCCC
Q 045553 877 NYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGTSE 956 (1082)
Q Consensus 877 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~ 956 (1082)
||+++++|.+++... ...+++..+..++.|++.||+|||+. +|+||||||+||+++ ++.+||+|||+++......
T Consensus 109 e~~~~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~al~~lH~~---~i~H~dlkp~NIl~~-~~~~~l~Dfg~~~~~~~~~ 183 (319)
T 2y4i_B 109 SLCKGRTLYSVVRDA-KIVLDVNKTRQIAQEIVKGMGYLHAK---GILHKDLKSKNVFYD-NGKVVITDFGLFSISGVLQ 183 (319)
T ss_dssp BCCCSEEHHHHTTSS-CCCCCSHHHHHHHHHHHHHHHHHHHT---TCCCCCCCSTTEEEC---CCEECCCSCCC------
T ss_pred ecccCCcHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHhC---CccccCCChhhEEEe-CCCEEEeecCCcccccccc
Confidence 999999999999865 35689999999999999999999999 999999999999998 6799999999987653221
Q ss_pred ----CccccCcccCCCcccchhccc---------CCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHH
Q 045553 957 ----THATTDVAGTFGYVAPEYAMT---------CRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASML 1023 (1082)
Q Consensus 957 ----~~~~~~~~gt~~y~aPE~~~~---------~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 1023 (1082)
........|++.|+|||++.+ ..++.++||||||+++|||++|+.||... .........
T Consensus 184 ~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~--------~~~~~~~~~ 255 (319)
T 2y4i_B 184 AGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQ--------PAEAIIWQM 255 (319)
T ss_dssp ----CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSC--------CHHHHHHHH
T ss_pred ccccccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCC--------CHHHHHHHh
Confidence 122233468999999999874 45789999999999999999999999632 222222222
Q ss_pred HhcCCCccccccccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhhCCC
Q 045553 1024 LLQGRPCEFFTAGLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQLKQIQPP 1080 (1082)
Q Consensus 1024 ~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L~~i~~~ 1080 (1082)
..+...... +...+.++.+++.+|++.+|++||++.|++++|+.+...
T Consensus 256 -~~~~~~~~~--------~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~l~~~ 303 (319)
T 2y4i_B 256 -GTGMKPNLS--------QIGMGKEISDILLFCWAFEQEERPTFTKLMDMLEKLPKR 303 (319)
T ss_dssp -HTTCCCCCC--------CSSCCTTHHHHHHHHHCSSTTTSCCHHHHHHHHTTC---
T ss_pred -ccCCCCCCC--------cCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHh
Confidence 222111111 112334688999999999999999999999999988754
No 257
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Probab=100.00 E-value=8.2e-35 Score=330.47 Aligned_cols=264 Identities=20% Similarity=0.319 Sum_probs=208.2
Q ss_pred hcCccccceecccCceEEEEEEE--cCCeEEEEEEeecCccccHHHHHHHHHHHhccCCC------ceeeEeeeeccCCe
Q 045553 800 TAGFNVQNCIGSGGFGATYKAEI--IPGVVVAVKRLSVGRFQGVQQFAAEIRTLGRVQHP------NLVTLIGYHVSEAE 871 (1082)
Q Consensus 800 ~~~~~~~~~lg~G~~g~Vy~a~~--~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~------niv~l~~~~~~~~~ 871 (1082)
.++|++.+.||+|+||.||+|.. .+++.||||++.... ...+.+.+|+++++.++|+ +++++++++...+.
T Consensus 13 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~~~~ 91 (339)
T 1z57_A 13 SARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVD-RYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHHGH 91 (339)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSSH-HHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEETTE
T ss_pred cCceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecCC-chhHHHHHHHHHHHHhhhcCCCCceeeEeeecccccCCc
Confidence 46899999999999999999975 368999999987542 3456788899999888765 49999999999999
Q ss_pred EEEEEeecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcC--------------
Q 045553 872 MFLIYNYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDN-------------- 937 (1082)
Q Consensus 872 ~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~-------------- 937 (1082)
.++||||+ +++|.+++.......+++..+..++.|++.||+|||+. +|+||||||+||+++.
T Consensus 92 ~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~~~~~~~~ 167 (339)
T 1z57_A 92 ICIVFELL-GLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLHSN---KLTHTDLKPENILFVQSDYTEAYNPKIKRD 167 (339)
T ss_dssp EEEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESCCCEEEEEC----CE
T ss_pred EEEEEcCC-CCCHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHEEEeccccccccCCccccc
Confidence 99999999 89999999887666799999999999999999999999 9999999999999987
Q ss_pred -----CCcEEEeecccceecCCCCCccccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCC
Q 045553 938 -----NLNAYLSDFGLARLLGTSETHATTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELISDKKALDPSFCSFGN 1012 (1082)
Q Consensus 938 -----~~~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~ 1012 (1082)
++.+||+|||.++..... .....||+.|+|||++.+..++.++||||||+++|||++|+.||....
T Consensus 168 ~~~~~~~~~kl~Dfg~~~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~----- 238 (339)
T 1z57_A 168 ERTLINPDIKVVDFGSATYDDEH----HSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHD----- 238 (339)
T ss_dssp EEEESCCCEEECCCSSCEETTSC----CCSSCSCGGGCCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSC-----
T ss_pred cccccCCCceEeeCcccccCccc----cccccCCccccChHHhhCCCCCcchhhHHHHHHHHHHHhCCCCCCCCC-----
Confidence 668999999999875432 234578999999999999999999999999999999999999997431
Q ss_pred CccHHHHHHHHHhcCCCccc---------ccc--------------------c--cCCCCChHHHHHHHHHHHHcccCCC
Q 045553 1013 GFNIVAWASMLLLQGRPCEF---------FTA--------------------G--LWDCGPHDDLIEMLNLAIMCTGESL 1061 (1082)
Q Consensus 1013 ~~~~~~~~~~~~~~~~~~~~---------~d~--------------------~--l~~~~~~~~~~~l~~li~~cl~~~p 1061 (1082)
.......+.... ....... +.. . -....+.....++.+++.+|++.||
T Consensus 239 ~~~~~~~~~~~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP 317 (339)
T 1z57_A 239 SKEHLAMMERIL-GPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYDP 317 (339)
T ss_dssp HHHHHHHHHHHH-CSCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSST
T ss_pred hHHHHHHHHHHh-CCCCHHHHhhccchhHHhhccccccccccccchhhhcCcchhhhcccchhhHHHHHHHHHHHhCcCc
Confidence 111111111111 1100000 000 0 0001233557789999999999999
Q ss_pred CCCCCHHHHHHH--HhhhC
Q 045553 1062 SSRPSMRQVAQQ--LKQIQ 1078 (1082)
Q Consensus 1062 ~~RPt~~ev~~~--L~~i~ 1078 (1082)
++|||+.|++++ +++++
T Consensus 318 ~~Rpt~~ell~hp~f~~~~ 336 (339)
T 1z57_A 318 AKRITLREALKHPFFDLLK 336 (339)
T ss_dssp TTSCCHHHHTTSGGGGGGG
T ss_pred ccccCHHHHhcCHHHHHHh
Confidence 999999999865 44443
No 258
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Probab=100.00 E-value=3.6e-35 Score=342.67 Aligned_cols=259 Identities=24% Similarity=0.342 Sum_probs=195.2
Q ss_pred cCccccceecccCceEEEEEEEc-CCeEEEEEEeecCccccHHHHHHHHHHHhccCCCceeeEeeeeccC------CeEE
Q 045553 801 AGFNVQNCIGSGGFGATYKAEII-PGVVVAVKRLSVGRFQGVQQFAAEIRTLGRVQHPNLVTLIGYHVSE------AEMF 873 (1082)
Q Consensus 801 ~~~~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~------~~~~ 873 (1082)
.+|++.+.||+|+||.||+|+.. +|+.||||++..... .+.+|++++++++||||+++++++... ...+
T Consensus 54 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~~----~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~~~ 129 (420)
T 1j1b_A 54 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR----FKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLN 129 (420)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCTT----SCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEEEE
T ss_pred ceEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccch----hHHHHHHHHHHcCCCCccceeeEEeccCCCCcceeEE
Confidence 46889999999999999999875 589999999865432 234799999999999999999987532 2367
Q ss_pred EEEeecCCCCHHHHHhh--CCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCC-CcEEEeecccce
Q 045553 874 LIYNYLPGGNLEKFIQD--RPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNN-LNAYLSDFGLAR 950 (1082)
Q Consensus 874 lV~E~~~~gsL~~~l~~--~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~-~~~kl~DfGla~ 950 (1082)
+||||+++ ++.+.+.. .....+++..+..++.||++||+|||+. +|+||||||+|||++.+ +.+||+|||+++
T Consensus 130 lv~e~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NILl~~~~~~~kl~DFG~a~ 205 (420)
T 1j1b_A 130 LVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAK 205 (420)
T ss_dssp EEEECCCE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCSGGGEEEETTTTEEEECCCTTCE
T ss_pred eehhcccc-cHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChhhEEEeCCCCeEEeccchhhh
Confidence 99999964 77766653 2246799999999999999999999999 99999999999999965 578999999998
Q ss_pred ecCCCCCccccCcccCCCcccchhcccC-CCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHH------
Q 045553 951 LLGTSETHATTDVAGTFGYVAPEYAMTC-RVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASML------ 1023 (1082)
Q Consensus 951 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~------ 1023 (1082)
.+..... .....||+.|+|||++.+. .++.++|||||||++|||++|+.||..... ...+...++..
T Consensus 206 ~~~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~----~~~l~~i~~~lg~p~~~ 279 (420)
T 1j1b_A 206 QLVRGEP--NVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSG----VDQLVEIIKVLGTPTRE 279 (420)
T ss_dssp ECCTTCC--CCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSH----HHHHHHHHHHHCSCCHH
T ss_pred hcccCCC--ceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCCCH----HHHHHHHHHHhCCCCHH
Confidence 7644332 2345789999999999765 799999999999999999999999974211 11111211110
Q ss_pred -H--hcCCCccccccccCCC-----CChHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 045553 1024 -L--LQGRPCEFFTAGLWDC-----GPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQ 1073 (1082)
Q Consensus 1024 -~--~~~~~~~~~d~~l~~~-----~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~ 1073 (1082)
+ ......+...+.+... .+...+.++.+|+.+|++.||++||++.|++++
T Consensus 280 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~Li~~~L~~dP~~R~t~~e~l~h 337 (420)
T 1j1b_A 280 QIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAH 337 (420)
T ss_dssp HHHHHCSCCCCCCCCCCCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred HHHhhChhhhhhccCccCCCCHHHhcCCCCCHHHHHHHHHhccCChhHCCCHHHHhCC
Confidence 0 0011111111111100 122345689999999999999999999999864
No 259
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A
Probab=100.00 E-value=5.6e-35 Score=326.19 Aligned_cols=253 Identities=23% Similarity=0.363 Sum_probs=196.8
Q ss_pred HhcCccccceecccCceEEEEEEEc-CCeEEEEEEeecCccccHHHHHHHHHHHhccCCCceeeEeeeecc---------
Q 045553 799 ATAGFNVQNCIGSGGFGATYKAEII-PGVVVAVKRLSVGRFQGVQQFAAEIRTLGRVQHPNLVTLIGYHVS--------- 868 (1082)
Q Consensus 799 ~~~~~~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~--------- 868 (1082)
..++|++.+.||+|+||.||+|+.. +++.||||++... ....+.+.+|++++++++||||+++++++.+
T Consensus 4 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~ 82 (303)
T 1zy4_A 4 YASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHT-EEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMT 82 (303)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEEE-HHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC---
T ss_pred ccccchhhheeccCCcEEEEEEEEcCCCeEEEEEEEecc-HHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhhc
Confidence 3567999999999999999999764 6899999998643 3445778999999999999999999998754
Q ss_pred ----CCeEEEEEeecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEe
Q 045553 869 ----EAEMFLIYNYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLS 944 (1082)
Q Consensus 869 ----~~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~ 944 (1082)
....++||||+++++|.++++.. ...+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+
T Consensus 83 ~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dlkp~Nil~~~~~~~kl~ 158 (303)
T 1zy4_A 83 AVKKKSTLFIQMEYCENGTLYDLIHSE-NLNQQRDEYWRLFRQILEALSYIHSQ---GIIHRDLKPMNIFIDESRNVKIG 158 (303)
T ss_dssp ---CEEEEEEEEECCCSCBHHHHHHHS-CGGGCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEEC
T ss_pred ccccCCceEEEEecCCCCCHHHhhhcc-ccccchHHHHHHHHHHHHHHHHHHhC---CeecccCCHHhEEEcCCCCEEEe
Confidence 45789999999999999999865 45688899999999999999999999 99999999999999999999999
Q ss_pred ecccceecCCCC-------------CccccCcccCCCcccchhcccC-CCCchhhHHHHHHHHHHHHhCCCCCCCCccCC
Q 045553 945 DFGLARLLGTSE-------------THATTDVAGTFGYVAPEYAMTC-RVSDKADVYSFGVVLLELISDKKALDPSFCSF 1010 (1082)
Q Consensus 945 DfGla~~~~~~~-------------~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~slGvll~elltg~~p~~~~~~~~ 1010 (1082)
|||.+....... ........|++.|+|||++.+. .++.++||||+|+++|||++ ||..
T Consensus 159 dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~---p~~~----- 230 (303)
T 1zy4_A 159 DFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFST----- 230 (303)
T ss_dssp CCCCCSCTTC-------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS---CCSS-----
T ss_pred eCcchhhcccccchhccccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHh---ccCC-----
Confidence 999998764321 1122345689999999999864 68999999999999999998 4432
Q ss_pred CCCccHHHHHHHHHhcCCCccccccccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 045553 1011 GNGFNIVAWASMLLLQGRPCEFFTAGLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQ 1073 (1082)
Q Consensus 1011 ~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~ 1073 (1082)
............ ... .......+...+..+.+++.+|++.||++|||+.|++++
T Consensus 231 --~~~~~~~~~~~~-~~~------~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h 284 (303)
T 1zy4_A 231 --GMERVNILKKLR-SVS------IEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLNS 284 (303)
T ss_dssp --HHHHHHHHHHHH-STT------CCCCTTCCTTTSHHHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred --chhHHHHHHhcc-ccc------cccCccccccchHHHHHHHHHHHhcCcccCcCHHHHhCC
Confidence 111222222221 111 011112334455678999999999999999999999874
No 260
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=100.00 E-value=1.3e-34 Score=354.37 Aligned_cols=135 Identities=21% Similarity=0.234 Sum_probs=93.8
Q ss_pred CCCCCEEEcccCCCcccCChhhcCCCCCCEEeCcCCCCCCCCCccccCCCCCCeEEccCcccccccCccccCCCCCcEEE
Q 045553 109 LTQLRVLLLAFNGFSGELPLEIGQLSLLEILDLSFNSFHGPIPPTLQNCSSLRLINLSGNQFNGTIPAFFGQSPGFQVVS 188 (1082)
Q Consensus 109 l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 188 (1082)
+.+++.|++++|.++...+..|+.+++|++|+|++|.+++..|..|+++++|++|+|++|.+++..|..|+.+++|++|+
T Consensus 50 l~~l~~l~l~~~~l~~lp~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 129 (597)
T 3oja_B 50 LNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLV 129 (597)
T ss_dssp GCCCSEEEESSCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCCceEEEeeCCCCCCcCHHHHccCCCCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEE
Confidence 56788888888888855555678888888888888888877777888888888888888888877777777777777777
Q ss_pred cccCcccccCCcccccccccccEEEcccCccCCCCCccccCCCCccEEEccCCcCCCCcCccccCCCCCCEEeCCCCcCc
Q 045553 189 LSFNLLSGSVPEEFGDNCVSLEHILLAANSLTGSIPPSLGNCTELRSLLLSSNMLQGDIPSSFGQLVNLEVLDLSRNFLS 268 (1082)
Q Consensus 189 L~~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 268 (1082)
|++|.++ .+|..+ |+++++|++|+|++|.+++..|..|+.+++|++|+|++|.++
T Consensus 130 L~~n~l~-~l~~~~------------------------~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 184 (597)
T 3oja_B 130 LERNDLS-SLPRGI------------------------FHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLT 184 (597)
T ss_dssp CCSSCCC-CCCTTT------------------------TTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECTTSCCS
T ss_pred eeCCCCC-CCCHHH------------------------hccCCCCCEEEeeCCcCCCCChhhhhcCCcCcEEECcCCCCC
Confidence 7777666 333332 344555555555555555555555555555555555555554
No 261
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...
Probab=100.00 E-value=1.6e-35 Score=338.97 Aligned_cols=255 Identities=22% Similarity=0.353 Sum_probs=184.3
Q ss_pred hcCccccceecccCceEEEEEEE-cCCeEEEEEEeecCc--cccHHHHHHHHHHHhccCCCceeeEeeeeccC------C
Q 045553 800 TAGFNVQNCIGSGGFGATYKAEI-IPGVVVAVKRLSVGR--FQGVQQFAAEIRTLGRVQHPNLVTLIGYHVSE------A 870 (1082)
Q Consensus 800 ~~~~~~~~~lg~G~~g~Vy~a~~-~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~------~ 870 (1082)
.++|++.+.||+|+||.||+|.. .+|+.||||++.... ....+.+.+|+++++.++||||+++++++... .
T Consensus 28 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~ 107 (367)
T 2fst_X 28 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFN 107 (367)
T ss_dssp ETTEEEEEECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCC
T ss_pred CCceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccCC
Confidence 46899999999999999999964 568999999986532 23456788999999999999999999998654 5
Q ss_pred eEEEEEeecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccce
Q 045553 871 EMFLIYNYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLAR 950 (1082)
Q Consensus 871 ~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~ 950 (1082)
..++||||+ +++|.+++.. ..+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++
T Consensus 108 ~~~lv~e~~-~~~L~~~~~~---~~l~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kL~DFG~a~ 180 (367)
T 2fst_X 108 DVYLVTHLM-GADLNNIVKC---QKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR 180 (367)
T ss_dssp CCEEEEECC-CEECC--------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECC-----
T ss_pred eEEEEeccc-CCCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHhhEEECCCCCEEEeeccccc
Confidence 679999999 7899999875 4699999999999999999999999 99999999999999999999999999998
Q ss_pred ecCCCCCccccCcccCCCcccchhccc-CCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHh-cCC
Q 045553 951 LLGTSETHATTDVAGTFGYVAPEYAMT-CRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLL-QGR 1028 (1082)
Q Consensus 951 ~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~-~~~ 1028 (1082)
..... .....||+.|+|||++.+ ..++.++||||+||++|||++|+.||.... ..+.+..+.. .+.
T Consensus 181 ~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~--------~~~~l~~i~~~~g~ 248 (367)
T 2fst_X 181 HTADE----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD--------HIDQLKLILRLVGT 248 (367)
T ss_dssp --------------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCSS--------HHHHHHHHHHHHCS
T ss_pred ccccc----CCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCCC--------HHHHHHHHHHHhCC
Confidence 65432 334578999999999987 678999999999999999999999996421 1121221111 111
Q ss_pred Cc-ccccc-----------ccCC--CCC-----hHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 045553 1029 PC-EFFTA-----------GLWD--CGP-----HDDLIEMLNLAIMCTGESLSSRPSMRQVAQQ 1073 (1082)
Q Consensus 1029 ~~-~~~d~-----------~l~~--~~~-----~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~ 1073 (1082)
.. +.+.. .+.. ..+ ......+.+++.+|++.||++|||+.|++++
T Consensus 249 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~t~~e~L~h 312 (367)
T 2fst_X 249 PGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH 312 (367)
T ss_dssp CCHHHHTTCCCHHHHHHHHTSCCCCCCCHHHHTTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred CCHHHHHHhhhHHHHHHHhccCCCCCCCHHHHCCCCCHHHHHHHHHhCCCCcccCcCHHHHhcC
Confidence 11 00000 0000 000 1224578999999999999999999999874
No 262
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}
Probab=100.00 E-value=5.5e-35 Score=329.07 Aligned_cols=259 Identities=19% Similarity=0.288 Sum_probs=197.1
Q ss_pred hcCccccceecccCceEEEEEEEc-CCeEEEEEEeecCccccHHHHHHHHHHHhccCCCceeeEeeeec-----------
Q 045553 800 TAGFNVQNCIGSGGFGATYKAEII-PGVVVAVKRLSVGRFQGVQQFAAEIRTLGRVQHPNLVTLIGYHV----------- 867 (1082)
Q Consensus 800 ~~~~~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~----------- 867 (1082)
.++|++.+.||+|+||.||+|... +++.||||++........+.+.+|++++++++||||+++++++.
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~ 89 (320)
T 2i6l_A 10 GSRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVG 89 (320)
T ss_dssp TTTEEEEEECC-----CEEEEEETTTTEEEEEEEEECCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC---
T ss_pred CCceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecCChHHHHHHHHHHHHHHhcCCCCeeEEEEeccccccccccccc
Confidence 467999999999999999999766 48999999998776666788999999999999999999998873
Q ss_pred ---cCCeEEEEEeecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEc-CCCcEEE
Q 045553 868 ---SEAEMFLIYNYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLD-NNLNAYL 943 (1082)
Q Consensus 868 ---~~~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~-~~~~~kl 943 (1082)
+....++||||++ |+|.+++.. ..+++..+..++.|++.||+|||+. +|+||||||+||+++ +++.+||
T Consensus 90 ~~~~~~~~~lv~e~~~-~~L~~~~~~---~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~kl 162 (320)
T 2i6l_A 90 SLTELNSVYIVQEYME-TDLANVLEQ---GPLLEEHARLFMYQLLRGLKYIHSA---NVLHRDLKPANLFINTEDLVLKI 162 (320)
T ss_dssp -CCSCSEEEEEEECCS-EEHHHHHTT---CCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEEETTTTEEEE
T ss_pred cccccCceeEEeeccC-CCHHHHhhc---CCccHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCCCeEEE
Confidence 3467899999996 699999975 4689999999999999999999999 999999999999997 5679999
Q ss_pred eecccceecCCCCC--ccccCcccCCCcccchhccc-CCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHH
Q 045553 944 SDFGLARLLGTSET--HATTDVAGTFGYVAPEYAMT-CRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWA 1020 (1082)
Q Consensus 944 ~DfGla~~~~~~~~--~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~ 1020 (1082)
+|||+++....... .......++..|+|||.+.+ ..++.++||||||+++|||++|+.||.... .....
T Consensus 163 ~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~--------~~~~~ 234 (320)
T 2i6l_A 163 GDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAH--------ELEQM 234 (320)
T ss_dssp CCCTTCBCC--------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSS--------HHHHH
T ss_pred ccCccccccCCCcccccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCCCC--------HHHHH
Confidence 99999987643221 12234467999999998865 678999999999999999999999997432 11222
Q ss_pred HHHHhcCCCc-------------cccccccCC-C-----CChHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 045553 1021 SMLLLQGRPC-------------EFFTAGLWD-C-----GPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQ 1073 (1082)
Q Consensus 1021 ~~~~~~~~~~-------------~~~d~~l~~-~-----~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~ 1073 (1082)
.......... ..+...... . .....+.++.+++.+|++.||++||++.|++++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 306 (320)
T 2i6l_A 235 QLILESIPVVHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEALSH 306 (320)
T ss_dssp HHHHHHSCCCCHHHHHHHHTTSCHHHHHHTTSCCCCHHHHSTTCCHHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred HHHHHhcCCCchhhhhhhhhcCcccccccccCCCCChhHhcchhhHHHHHHHHHHcCCCccccCCHHHHhCC
Confidence 2222111100 000000000 0 012345689999999999999999999999874
No 263
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}
Probab=100.00 E-value=4.4e-35 Score=341.08 Aligned_cols=267 Identities=21% Similarity=0.331 Sum_probs=185.1
Q ss_pred cCccc-cceecccCceEEEEEEEc---CCeEEEEEEeecCccccHHHHHHHHHHHhccCCCceeeEeeee--ccCCeEEE
Q 045553 801 AGFNV-QNCIGSGGFGATYKAEII---PGVVVAVKRLSVGRFQGVQQFAAEIRTLGRVQHPNLVTLIGYH--VSEAEMFL 874 (1082)
Q Consensus 801 ~~~~~-~~~lg~G~~g~Vy~a~~~---~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~--~~~~~~~l 874 (1082)
+.|++ .++||+|+||+||+|+.. +++.||||++..... ...+.+|++++++++||||+++++++ ......++
T Consensus 20 ~~y~~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~~--~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~l 97 (405)
T 3rgf_A 20 DLFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGI--SMSACREIALLRELKHPNVISLQKVFLSHADRKVWL 97 (405)
T ss_dssp HHEECSSCCCC-----EEEEEEESSSSCCCCEEEEECSSSSC--CHHHHHHHHHHHHCCCTTBCCCCEEEEETTTTEEEE
T ss_pred hhhhhcCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCCC--CHHHHHHHHHHHhcCCCCeeeEeeEEecCCCCeEEE
Confidence 34666 458999999999999865 478999999975432 35688999999999999999999998 45778999
Q ss_pred EEeecCCCCHHHHHhhCC-------CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEE----cCCCcEEE
Q 045553 875 IYNYLPGGNLEKFIQDRP-------RRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILL----DNNLNAYL 943 (1082)
Q Consensus 875 V~E~~~~gsL~~~l~~~~-------~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill----~~~~~~kl 943 (1082)
||||++ ++|.+++.... ...+++..++.++.||+.||+|||+. +|+||||||+||++ +.++.+||
T Consensus 98 v~e~~~-~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~kl 173 (405)
T 3rgf_A 98 LFDYAE-HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHAN---WVLHRDLKPANILVMGEGPERGRVKI 173 (405)
T ss_dssp EEECCS-EEHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECCSSTTTTCEEE
T ss_pred EEeCCC-CCHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHhC---CEeCCCcCHHHeEEecCCCCCCcEEE
Confidence 999995 68888876321 23599999999999999999999999 99999999999999 67889999
Q ss_pred eecccceecCCCCC--ccccCcccCCCcccchhccc-CCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCC--CCccHHH
Q 045553 944 SDFGLARLLGTSET--HATTDVAGTFGYVAPEYAMT-CRVSDKADVYSFGVVLLELISDKKALDPSFCSFG--NGFNIVA 1018 (1082)
Q Consensus 944 ~DfGla~~~~~~~~--~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~--~~~~~~~ 1018 (1082)
+|||+++.+..... .......||+.|+|||++.+ ..++.++||||+||++|||++|+.||........ ......+
T Consensus 174 ~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~ 253 (405)
T 3rgf_A 174 ADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQ 253 (405)
T ss_dssp CCTTCCC----------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTCCCC------CCCCHHH
T ss_pred EECCCceecCCCCcccccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCCCCccccccccccchHHH
Confidence 99999987653322 23345679999999999987 4589999999999999999999999974322110 0011111
Q ss_pred HHHHHHhcCCCcc--ccccc-----------c----CCCC---------ChHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 045553 1019 WASMLLLQGRPCE--FFTAG-----------L----WDCG---------PHDDLIEMLNLAIMCTGESLSSRPSMRQVAQ 1072 (1082)
Q Consensus 1019 ~~~~~~~~~~~~~--~~d~~-----------l----~~~~---------~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~ 1072 (1082)
.......-+.... +-+-. . .... .......+.+|+.+|++.||++|||+.|+++
T Consensus 254 l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~L~~dP~~R~ta~e~L~ 333 (405)
T 3rgf_A 254 LDRIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQ 333 (405)
T ss_dssp HHHHHHHHCCCCTTTCGGGGGSTTHHHHHHHCCGGGGTTCCHHHHHHTTTCCTTSHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred HHHHHHhhCCCChhhcchhhcCcchhhhhhhccccCCCcchhhhhHhhcCCCCCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence 1111111111100 00000 0 0000 0011456889999999999999999999987
Q ss_pred H
Q 045553 1073 Q 1073 (1082)
Q Consensus 1073 ~ 1073 (1082)
+
T Consensus 334 h 334 (405)
T 3rgf_A 334 D 334 (405)
T ss_dssp S
T ss_pred C
Confidence 4
No 264
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Probab=100.00 E-value=7.4e-36 Score=335.13 Aligned_cols=253 Identities=19% Similarity=0.314 Sum_probs=200.2
Q ss_pred HHhcCccccceecccCceEEEEEEEcCCeEEEEEEeecCc--cccHHHHHHHHHHHhccC--CCceeeEeeeeccCCeEE
Q 045553 798 RATAGFNVQNCIGSGGFGATYKAEIIPGVVVAVKRLSVGR--FQGVQQFAAEIRTLGRVQ--HPNLVTLIGYHVSEAEMF 873 (1082)
Q Consensus 798 ~~~~~~~~~~~lg~G~~g~Vy~a~~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~--h~niv~l~~~~~~~~~~~ 873 (1082)
....+|++.+.||+|+||.||+|...+++.||||++.... ....+.+.+|++++++++ ||||+++++++......+
T Consensus 25 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~ 104 (313)
T 3cek_A 25 VKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIY 104 (313)
T ss_dssp ETTEEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEECSSEEE
T ss_pred eccceEEEEEEecCCCCEEEEEEEcCCCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEEeecCCEEE
Confidence 3456799999999999999999988889999999997543 334577899999999997 599999999999999999
Q ss_pred EEEeecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecC
Q 045553 874 LIYNYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLG 953 (1082)
Q Consensus 874 lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~ 953 (1082)
+||| +.+++|.+++... ..+++..+..++.|+++||+|||+. +|+||||||+||++++ +.+||+|||+++...
T Consensus 105 lv~e-~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~~-~~~kL~Dfg~~~~~~ 177 (313)
T 3cek_A 105 MVME-CGNIDLNSWLKKK--KSIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIVD-GMLKLIDFGIANQMQ 177 (313)
T ss_dssp EEEC-CCSEEHHHHHHHC--SSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEET-TEEEECCCSSSCC--
T ss_pred EEEe-cCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCcccEEEEC-CeEEEeecccccccc
Confidence 9999 4588999999874 4789999999999999999999999 9999999999999975 899999999998765
Q ss_pred CCCCc-cccCcccCCCcccchhccc-----------CCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHH
Q 045553 954 TSETH-ATTDVAGTFGYVAPEYAMT-----------CRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWAS 1021 (1082)
Q Consensus 954 ~~~~~-~~~~~~gt~~y~aPE~~~~-----------~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~ 1021 (1082)
..... ......|++.|+|||++.+ ..++.++||||||+++|||++|+.||.... .......
T Consensus 178 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~-------~~~~~~~ 250 (313)
T 3cek_A 178 PDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQII-------NQISKLH 250 (313)
T ss_dssp ------------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTTCC-------SHHHHHH
T ss_pred CccccccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhhHH-------HHHHHHH
Confidence 43322 2234568999999999875 478899999999999999999999996421 1122222
Q ss_pred HHHhcCCCccccccccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 045553 1022 MLLLQGRPCEFFTAGLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQ 1073 (1082)
Q Consensus 1022 ~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~ 1073 (1082)
...... .....+...+.++.+++.+|++.||++||++.|++++
T Consensus 251 ~~~~~~---------~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h 293 (313)
T 3cek_A 251 AIIDPN---------HEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAH 293 (313)
T ss_dssp HHHCTT---------SCCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred HHHhcc---------cccCCcccchHHHHHHHHHHccCCcccCcCHHHHhcC
Confidence 222221 1111222334678999999999999999999999874
No 265
>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...
Probab=100.00 E-value=4.9e-35 Score=335.64 Aligned_cols=262 Identities=23% Similarity=0.309 Sum_probs=203.7
Q ss_pred HhcCccccceecccCceEEEEEEEc-CCeEEEEEEeecCc-cccHHHHHHHHHHHhccCCCceeeEeeeeccC-----Ce
Q 045553 799 ATAGFNVQNCIGSGGFGATYKAEII-PGVVVAVKRLSVGR-FQGVQQFAAEIRTLGRVQHPNLVTLIGYHVSE-----AE 871 (1082)
Q Consensus 799 ~~~~~~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~-----~~ 871 (1082)
...+|++.+.||+|+||.||+|... +++.||||++.... ....+.+.+|++++++++||||+++++++... ..
T Consensus 25 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 104 (364)
T 3qyz_A 25 VGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKD 104 (364)
T ss_dssp CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCC
T ss_pred ccccEEEEEEeecCCCeEEEEEEECCCCeEEEEEEeccccCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccce
Confidence 4568999999999999999999654 68999999997543 23447789999999999999999999998654 46
Q ss_pred EEEEEeecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeeccccee
Q 045553 872 MFLIYNYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARL 951 (1082)
Q Consensus 872 ~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~ 951 (1082)
.++||||++ ++|.+++... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.
T Consensus 105 ~~iv~e~~~-~~L~~~l~~~---~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~ 177 (364)
T 3qyz_A 105 VYIVQDLME-TDLYKLLKTQ---HLSNDHICYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARV 177 (364)
T ss_dssp EEEEEECCS-EEHHHHHHHC---CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEE
T ss_pred EEEEEcccC-cCHHHHHHhC---CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCChHhEEECCCCCEEEEeCcceEe
Confidence 899999996 6999999864 589999999999999999999999 999999999999999999999999999987
Q ss_pred cCCCCCc--cccCcccCCCcccchhccc-CCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCC
Q 045553 952 LGTSETH--ATTDVAGTFGYVAPEYAMT-CRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQGR 1028 (1082)
Q Consensus 952 ~~~~~~~--~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 1028 (1082)
....... ......||+.|+|||++.+ ..++.++||||+||++|||++|+.||..... ......+.......
T Consensus 178 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~-----~~~~~~i~~~~~~~- 251 (364)
T 3qyz_A 178 ADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHY-----LDQLNHILGILGSP- 251 (364)
T ss_dssp CCGGGCBCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSSG-----GGHHHHHHHHHCSC-
T ss_pred cCCCCCccccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCCh-----HHHHHHHHHHhCCC-
Confidence 7543222 2345679999999998754 5589999999999999999999999974321 12222221111111
Q ss_pred Cccccccc-----------c--CCC-----CChHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 045553 1029 PCEFFTAG-----------L--WDC-----GPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQ 1073 (1082)
Q Consensus 1029 ~~~~~d~~-----------l--~~~-----~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~ 1073 (1082)
..+.+... . ... .......++.+++.+|++.||++|||+.|++++
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 314 (364)
T 3qyz_A 252 SQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAH 314 (364)
T ss_dssp CHHHHHTCCCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred CHHHHHHhhhhhHHHHHHhcCCccCCCHHHhCCCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 00000000 0 000 012234678999999999999999999999864
No 266
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Probab=100.00 E-value=3.2e-35 Score=331.30 Aligned_cols=251 Identities=21% Similarity=0.338 Sum_probs=197.9
Q ss_pred hcCccccceecccCceEEEEEEEc-CCeEEEEEEeecCcc--------ccHHHHHHHHHHHhccCCCceeeEeeeeccCC
Q 045553 800 TAGFNVQNCIGSGGFGATYKAEII-PGVVVAVKRLSVGRF--------QGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEA 870 (1082)
Q Consensus 800 ~~~~~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~~--------~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~ 870 (1082)
.++|++.+.||+|+||.||+|... +++.||||++..... .....+.+|++++++++||||+++++++....
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~ 88 (322)
T 2ycf_A 9 RDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAED 88 (322)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEESSS
T ss_pred hhceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcCCc
Confidence 457999999999999999999764 589999999865321 22345789999999999999999999987655
Q ss_pred eEEEEEeecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCc---EEEeecc
Q 045553 871 EMFLIYNYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLN---AYLSDFG 947 (1082)
Q Consensus 871 ~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~---~kl~DfG 947 (1082)
.++||||+++++|.+++.. ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++. +||+|||
T Consensus 89 -~~lv~e~~~~~~L~~~~~~--~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg 162 (322)
T 2ycf_A 89 -YYIVLELMEGGELFDKVVG--NKRLKEATCKLYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFG 162 (322)
T ss_dssp -EEEEEECCTTEETHHHHST--TCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSSSCCEEECCCT
T ss_pred -eEEEEecCCCCcHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEEecCCCCCeEEEccCc
Confidence 8999999999999999976 35789999999999999999999999 9999999999999987654 9999999
Q ss_pred cceecCCCCCccccCcccCCCcccchhcc---cCCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHH
Q 045553 948 LARLLGTSETHATTDVAGTFGYVAPEYAM---TCRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLL 1024 (1082)
Q Consensus 948 la~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 1024 (1082)
+++...... ......|++.|+|||++. +..++.++||||||+++|||++|+.||..... ...+...+
T Consensus 163 ~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~----~~~~~~~~---- 232 (322)
T 2ycf_A 163 HSKILGETS--LMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRT----QVSLKDQI---- 232 (322)
T ss_dssp TCEECCCCH--HHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTC----SSCHHHHH----
T ss_pred cceeccccc--ccccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccch----HHHHHHHH----
Confidence 998764322 223456899999999974 56788999999999999999999999974322 11222221
Q ss_pred hcCCCccccccccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 045553 1025 LQGRPCEFFTAGLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQ 1072 (1082)
Q Consensus 1025 ~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~ 1072 (1082)
..+.... .+.. ....+..+.+++.+|++.||++||++.|+++
T Consensus 233 ~~~~~~~--~~~~----~~~~~~~~~~li~~~l~~dP~~Rps~~~~l~ 274 (322)
T 2ycf_A 233 TSGKYNF--IPEV----WAEVSEKALDLVKKLLVVDPKARFTTEEALR 274 (322)
T ss_dssp HHTCCCC--CHHH----HTTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred HhCcccc--Cchh----hhhcCHHHHHHHHHHcccCHhhCCCHHHHhh
Confidence 1121110 0000 0123467899999999999999999999985
No 267
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*
Probab=100.00 E-value=1.1e-34 Score=321.35 Aligned_cols=251 Identities=24% Similarity=0.314 Sum_probs=205.1
Q ss_pred HhcCccccceecccCceEEEEEEEc-CCeEEEEEEeecCc--cccHHHHHHHHHHHhccCCCceeeEeeeeccCCeEEEE
Q 045553 799 ATAGFNVQNCIGSGGFGATYKAEII-PGVVVAVKRLSVGR--FQGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFLI 875 (1082)
Q Consensus 799 ~~~~~~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV 875 (1082)
..++|++.+.||+|+||.||+|+.. +++.||||++.... ....+.+.+|++++++++||||+++++++.+....++|
T Consensus 20 ~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 99 (287)
T 2wei_A 20 FAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIV 99 (287)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred HhhcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEeCCCeEEEE
Confidence 4567999999999999999999765 68999999986543 24567899999999999999999999999999999999
Q ss_pred EeecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCC---CcEEEeecccceec
Q 045553 876 YNYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNN---LNAYLSDFGLARLL 952 (1082)
Q Consensus 876 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~---~~~kl~DfGla~~~ 952 (1082)
|||+++++|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.+ +.+||+|||++...
T Consensus 100 ~e~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~~~~ 174 (287)
T 2wei_A 100 GELYTGGELFDEIIKR--KRFSEHDAARIIKQVFSGITYMHKH---NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCF 174 (287)
T ss_dssp ECCCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSSTTCCEEECSTTGGGTB
T ss_pred EEccCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCChhhEEEecCCCcccEEEeccCcceee
Confidence 9999999999998764 4689999999999999999999999 99999999999999754 47999999999866
Q ss_pred CCCCCccccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCCCccc
Q 045553 953 GTSETHATTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQGRPCEF 1032 (1082)
Q Consensus 953 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1032 (1082)
..... .....|++.|+|||.+.+ .++.++||||+|+++|+|++|+.||... ...+....... +....
T Consensus 175 ~~~~~--~~~~~~~~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~--------~~~~~~~~~~~-~~~~~- 241 (287)
T 2wei_A 175 QQNTK--MKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGK--------NEYDILKRVET-GKYAF- 241 (287)
T ss_dssp CCCSS--CSCHHHHHTTCCHHHHTT-CCCTHHHHHHHHHHHHHHHHSSCSSCCS--------SHHHHHHHHHH-CCCCC-
T ss_pred cCCCc--cccccCcccccChHHhcC-CCCCchhhHhHHHHHHHHHhCCCCCCCC--------CHHHHHHHHHc-CCCCC-
Confidence 43322 233468999999999876 4899999999999999999999999642 22233333322 21110
Q ss_pred cccccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 045553 1033 FTAGLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQ 1072 (1082)
Q Consensus 1033 ~d~~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~ 1072 (1082)
+... ....+.++.+++.+|++.+|++||++.|+++
T Consensus 242 -~~~~----~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 276 (287)
T 2wei_A 242 -DLPQ----WRTISDDAKDLIRKMLTFHPSLRITATQCLE 276 (287)
T ss_dssp -CSGG----GTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred -Cchh----hhhcCHHHHHHHHHHcccChhhCcCHHHHhc
Confidence 0000 1123467999999999999999999999987
No 268
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Probab=100.00 E-value=2.2e-34 Score=332.45 Aligned_cols=200 Identities=25% Similarity=0.338 Sum_probs=172.7
Q ss_pred HhcCccccceecccCceEEEEEEEc-CCeEEEEEEeecCccccHHHHHHHHHHHhccC-CC-----ceeeEeeeeccCCe
Q 045553 799 ATAGFNVQNCIGSGGFGATYKAEII-PGVVVAVKRLSVGRFQGVQQFAAEIRTLGRVQ-HP-----NLVTLIGYHVSEAE 871 (1082)
Q Consensus 799 ~~~~~~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h~-----niv~l~~~~~~~~~ 871 (1082)
..++|++.+.||+|+||+||+|... +++.||||++.... ....++.+|+++++.++ |+ +++++++++...+.
T Consensus 52 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~ 130 (382)
T 2vx3_A 52 WMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKK-AFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFRNH 130 (382)
T ss_dssp ETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSSH-HHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEETTE
T ss_pred eeeeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEeccH-HHHHHHHHHHHHHHHHHhcccccceeEEEeeeeeccCCc
Confidence 4578999999999999999999755 68899999997542 33566778888888885 44 49999999999999
Q ss_pred EEEEEeecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEc--CCCcEEEeecccc
Q 045553 872 MFLIYNYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLD--NNLNAYLSDFGLA 949 (1082)
Q Consensus 872 ~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~--~~~~~kl~DfGla 949 (1082)
.++||||++ ++|.+++.......+++..+..++.|++.||+|||++ ..+|+||||||+||+++ .++.+||+|||++
T Consensus 131 ~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~al~~lH~~-~~~ivHrDlkp~NIll~~~~~~~~kL~DFG~a 208 (382)
T 2vx3_A 131 LCLVFEMLS-YNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLATP-ELSIIHCDLKPENILLCNPKRSAIKIVDFGSS 208 (382)
T ss_dssp EEEEEECCC-CBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHTST-TTCEECCCCSGGGEEESSTTSCCEEECCCTTC
T ss_pred eEEEEecCC-CCHHHHHhhcCcCCCCHHHHHHHHHHHHHHHHHhccC-CCCEEcCCCCcccEEEecCCCCcEEEEeccCc
Confidence 999999995 6999999987656799999999999999999999952 12899999999999994 5788999999999
Q ss_pred eecCCCCCccccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHhCCCCCCC
Q 045553 950 RLLGTSETHATTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELISDKKALDP 1005 (1082)
Q Consensus 950 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~elltg~~p~~~ 1005 (1082)
+..... .....||+.|+|||++.+..++.++|||||||++|||++|+.||..
T Consensus 209 ~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~ 260 (382)
T 2vx3_A 209 CQLGQR----IYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSG 260 (382)
T ss_dssp EETTCC----CCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred eecccc----cccccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCC
Confidence 876432 2345789999999999999999999999999999999999999974
No 269
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Probab=100.00 E-value=1.6e-34 Score=330.16 Aligned_cols=263 Identities=22% Similarity=0.311 Sum_probs=201.0
Q ss_pred HhcCccccceecccCceEEEEEEEc-CCeEEEEEEeecCc-cccHHHHHHHHHHHhccCCCceeeEeeeeccC-----Ce
Q 045553 799 ATAGFNVQNCIGSGGFGATYKAEII-PGVVVAVKRLSVGR-FQGVQQFAAEIRTLGRVQHPNLVTLIGYHVSE-----AE 871 (1082)
Q Consensus 799 ~~~~~~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~-----~~ 871 (1082)
..++|++.+.||+|+||.||+|... +|+.||||++.... ......+.+|++++++++||||+++++++... ..
T Consensus 9 i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 88 (353)
T 2b9h_A 9 ISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNE 88 (353)
T ss_dssp SCTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCCC
T ss_pred cccceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeecccccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccce
Confidence 3568999999999999999999765 68999999996443 23456788999999999999999999987654 67
Q ss_pred EEEEEeecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeeccccee
Q 045553 872 MFLIYNYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARL 951 (1082)
Q Consensus 872 ~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~ 951 (1082)
.++||||++ ++|.+++... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.
T Consensus 89 ~~lv~e~~~-~~L~~~~~~~---~~~~~~~~~~~~qi~~~L~~LH~~---~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~ 161 (353)
T 2b9h_A 89 VYIIQELMQ-TDLHRVISTQ---MLSDDHIQYFIYQTLRAVKVLHGS---NVIHRDLKPSNLLINSNCDLKVCDFGLARI 161 (353)
T ss_dssp EEEEECCCS-EEHHHHHHHC---CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTCCEEECCCTTCEE
T ss_pred EEEEEeccC-ccHHHHHhhc---CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEEcCCCcEEEEecccccc
Confidence 899999996 6999999863 689999999999999999999999 999999999999999999999999999987
Q ss_pred cCCCCCc---------cccCcccCCCcccchhccc-CCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHH
Q 045553 952 LGTSETH---------ATTDVAGTFGYVAPEYAMT-CRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWAS 1021 (1082)
Q Consensus 952 ~~~~~~~---------~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~ 1021 (1082)
....... ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||..... ......+.
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~-----~~~~~~~~ 236 (353)
T 2b9h_A 162 IDESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDY-----RHQLLLIF 236 (353)
T ss_dssp CC----------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSH-----HHHHHHHH
T ss_pred cccccccccCccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCCCc-----HHHHHHHH
Confidence 6532211 1233578999999998764 7789999999999999999999999974311 01111111
Q ss_pred HHHhcCCCcccccc-----------ccC--CC-----CChHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 045553 1022 MLLLQGRPCEFFTA-----------GLW--DC-----GPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQ 1073 (1082)
Q Consensus 1022 ~~~~~~~~~~~~d~-----------~l~--~~-----~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~ 1073 (1082)
.............. .+. .. .....+.++.+++.+|++.||++|||+.|++++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 306 (353)
T 2b9h_A 237 GIIGTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEH 306 (353)
T ss_dssp HHHCCCCSTTTTTTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred HHhCCCchhccccccccchhhHHhhcccCCCCcchhhhcccCCHHHHHHHHHhcCcCcccCCCHHHHhcC
Confidence 11111000000000 000 00 012345678999999999999999999999874
No 270
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Probab=100.00 E-value=6.3e-35 Score=330.56 Aligned_cols=254 Identities=20% Similarity=0.253 Sum_probs=177.0
Q ss_pred HhcCccccc-eecccCceEEEEEEEc-CCeEEEEEEeecCccccHHHHHHHHHHHhccCCCceeeEeeeecc----CCeE
Q 045553 799 ATAGFNVQN-CIGSGGFGATYKAEII-PGVVVAVKRLSVGRFQGVQQFAAEIRTLGRVQHPNLVTLIGYHVS----EAEM 872 (1082)
Q Consensus 799 ~~~~~~~~~-~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~----~~~~ 872 (1082)
..++|.+.+ .||+|+||+||+|... +++.||||++.... ....+....++.++||||+++++++.. ....
T Consensus 26 ~~~~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~ 101 (336)
T 3fhr_A 26 VTDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSP----KARQEVDHHWQASGGPHIVCILDVYENMHHGKRCL 101 (336)
T ss_dssp GGGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESSH----HHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEE
T ss_pred ccceeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCcH----HHHHHHHHHHHhcCCCChHHHHHHHhhccCCCceE
Confidence 356788854 6999999999999765 68999999986532 222233344667799999999998875 4568
Q ss_pred EEEEeecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcC---CCcEEEeecccc
Q 045553 873 FLIYNYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDN---NLNAYLSDFGLA 949 (1082)
Q Consensus 873 ~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~---~~~~kl~DfGla 949 (1082)
++||||+++|+|.+++.......+++..++.++.|++.||+|||+. +|+||||||+||+++. ++.+||+|||++
T Consensus 102 ~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~ql~~~l~~LH~~---~ivH~dlkp~NIll~~~~~~~~~kl~Dfg~~ 178 (336)
T 3fhr_A 102 LIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSH---NIAHRDVKPENLLYTSKEKDAVLKLTDFGFA 178 (336)
T ss_dssp EEEEECCTTEEHHHHHHTC-CCCCBHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSTTCCEEECCCTTC
T ss_pred EEEEeccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEEecCCCceEEEeccccc
Confidence 9999999999999999987666899999999999999999999999 9999999999999976 456999999999
Q ss_pred eecCCCCCccccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCCC
Q 045553 950 RLLGTSETHATTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQGRP 1029 (1082)
Q Consensus 950 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1029 (1082)
+..... ......||+.|+|||++.+..++.++||||||+++|||++|+.||...... ............+..
T Consensus 179 ~~~~~~---~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~-----~~~~~~~~~~~~~~~ 250 (336)
T 3fhr_A 179 KETTQN---ALQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQ-----AISPGMKRRIRLGQY 250 (336)
T ss_dssp EEC-------------------------CHHHHHHHHHHHHHHHHHHHHSSCCC--------------------------
T ss_pred eecccc---ccccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCccch-----hhhhhHHHhhhcccc
Confidence 876432 223456899999999999889999999999999999999999999643211 000000010111000
Q ss_pred ccccccccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 045553 1030 CEFFTAGLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQ 1073 (1082)
Q Consensus 1030 ~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~ 1073 (1082)
..........+.++.+++.+|++.||++|||+.|++++
T Consensus 251 ------~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 288 (336)
T 3fhr_A 251 ------GFPNPEWSEVSEDAKQLIRLLLKTDPTERLTITQFMNH 288 (336)
T ss_dssp ------CCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHS
T ss_pred ------ccCchhhccCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 00001112445689999999999999999999999874
No 271
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A
Probab=100.00 E-value=9.8e-35 Score=334.68 Aligned_cols=265 Identities=21% Similarity=0.296 Sum_probs=203.7
Q ss_pred hcCccccceecccCceEEEEEEE-cCCeEEEEEEeecCccccHHHHHHHHHHHhccC-----------CCceeeEeeeec
Q 045553 800 TAGFNVQNCIGSGGFGATYKAEI-IPGVVVAVKRLSVGRFQGVQQFAAEIRTLGRVQ-----------HPNLVTLIGYHV 867 (1082)
Q Consensus 800 ~~~~~~~~~lg~G~~g~Vy~a~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-----------h~niv~l~~~~~ 867 (1082)
.++|++.+.||+|+||+||+|+. .+++.||||++.... ...+.+.+|++++++++ ||||+++++++.
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~~ 96 (373)
T 1q8y_A 18 DARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDK-VYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFN 96 (373)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEE
T ss_pred CCeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecCCc-cchhhhhHHHHHHHHhhcccccchhccccchHHHHHHHhh
Confidence 35799999999999999999975 568999999987542 34567888999998886 899999999987
Q ss_pred cCC----eEEEEEeecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEc------C
Q 045553 868 SEA----EMFLIYNYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLD------N 937 (1082)
Q Consensus 868 ~~~----~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~------~ 937 (1082)
..+ ..++||||+ +++|.+++.......+++..+..++.|++.||+|||+.+ +|+||||||+||+++ .
T Consensus 97 ~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~--~ivH~Dikp~NIll~~~~~~~~ 173 (373)
T 1q8y_A 97 HKGPNGVHVVMVFEVL-GENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRC--GIIHTDIKPENVLMEIVDSPEN 173 (373)
T ss_dssp EEETTEEEEEEEECCC-CEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTT--CEECSCCSGGGEEEEEEETTTT
T ss_pred ccCCCCceEEEEEecC-CCCHHHHHHHhhccCCcHHHHHHHHHHHHHHHHHHHhcC--CEEecCCChHHeEEeccCCCcC
Confidence 654 789999999 899999999876667999999999999999999999954 899999999999994 4
Q ss_pred CCcEEEeecccceecCCCCCccccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHH
Q 045553 938 NLNAYLSDFGLARLLGTSETHATTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIV 1017 (1082)
Q Consensus 938 ~~~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~ 1017 (1082)
.+.+||+|||++...... .....||+.|+|||++.+..++.++|||||||++|||++|+.||....... ......
T Consensus 174 ~~~~kl~Dfg~a~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~-~~~~~~ 248 (373)
T 1q8y_A 174 LIQIKIADLGNACWYDEH----YTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHS-YTKDDD 248 (373)
T ss_dssp EEEEEECCCTTCEETTBC----CCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC----------CHHH
T ss_pred cceEEEcccccccccCCC----CCCCCCCccccCcHHHhCCCCCchHhHHHHHHHHHHHHhCCCCCCCCcccc-cCChHH
Confidence 458999999999876532 233478999999999999999999999999999999999999997542110 001111
Q ss_pred HHHHHHHhcCCCccc-----------ccc----------c---------cCCCCChHHHHHHHHHHHHcccCCCCCCCCH
Q 045553 1018 AWASMLLLQGRPCEF-----------FTA----------G---------LWDCGPHDDLIEMLNLAIMCTGESLSSRPSM 1067 (1082)
Q Consensus 1018 ~~~~~~~~~~~~~~~-----------~d~----------~---------l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~ 1067 (1082)
........-+..... +.. . -....+.....++.+++.+|++.||++|||+
T Consensus 249 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~ 328 (373)
T 1q8y_A 249 HIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADA 328 (373)
T ss_dssp HHHHHHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBCH
T ss_pred HHHHHHHhcCCCCHHHHhccchhhhhcCCcchhcccccccccchhhhhhhcccCCcchHHHHHHHHHHHhccCccccCCH
Confidence 111111111111100 000 0 0012346678899999999999999999999
Q ss_pred HHHHHH
Q 045553 1068 RQVAQQ 1073 (1082)
Q Consensus 1068 ~ev~~~ 1073 (1082)
.||+++
T Consensus 329 ~ell~h 334 (373)
T 1q8y_A 329 GGLVNH 334 (373)
T ss_dssp HHHHTC
T ss_pred HHHhhC
Confidence 999874
No 272
>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A
Probab=100.00 E-value=1e-34 Score=333.71 Aligned_cols=254 Identities=22% Similarity=0.328 Sum_probs=197.6
Q ss_pred hcCccccceecccCceEEEEEEEc-CCeEEEEEEeecCcc--ccHHHHHHHHHHHhccCCCceeeEeeeeccCCeE----
Q 045553 800 TAGFNVQNCIGSGGFGATYKAEII-PGVVVAVKRLSVGRF--QGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEM---- 872 (1082)
Q Consensus 800 ~~~~~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~---- 872 (1082)
.++|.+.+.||+|+||.||+|... +|+.||||++..... ...+.+.+|+.+++.++||||+++++++......
T Consensus 41 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 120 (371)
T 4exu_A 41 PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFY 120 (371)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTCC
T ss_pred cccEEEEeEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCcccce
Confidence 467999999999999999999654 689999999975432 3356788999999999999999999999876654
Q ss_pred --EEEEeecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccce
Q 045553 873 --FLIYNYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLAR 950 (1082)
Q Consensus 873 --~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~ 950 (1082)
++||||+. ++|.+++.. .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++
T Consensus 121 ~~~lv~e~~~-~~l~~~~~~----~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kL~Dfg~a~ 192 (371)
T 4exu_A 121 DFYLVMPFMQ-TDLQKIMGM----EFSEEKIQYLVYQMLKGLKYIHSA---GVVHRDLKPGNLAVNEDCELKILDFGLAR 192 (371)
T ss_dssp CCEEEEECCC-EEHHHHTTS----CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECSTTCC-
T ss_pred eEEEEEcccc-ccHHHHhhc----CCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCcCHHHeEECCCCCEEEEecCccc
Confidence 99999996 688888743 489999999999999999999999 99999999999999999999999999998
Q ss_pred ecCCCCCccccCcccCCCcccchhccc-CCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHh-cCC
Q 045553 951 LLGTSETHATTDVAGTFGYVAPEYAMT-CRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLL-QGR 1028 (1082)
Q Consensus 951 ~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~-~~~ 1028 (1082)
..... .....||+.|+|||++.+ ..++.++||||+||++|||++|+.||... ...+....... .+.
T Consensus 193 ~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~--------~~~~~~~~i~~~~~~ 260 (371)
T 4exu_A 193 HADAE----MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGK--------DYLDQLTQILKVTGV 260 (371)
T ss_dssp -----------CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCS--------SHHHHHHHHHHHHCC
T ss_pred ccccC----cCCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCC--------ChHHHHHHHHHHhCC
Confidence 65432 234578999999999987 78899999999999999999999999742 11222222211 111
Q ss_pred Cc-ccccc---------------ccCC---CCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 045553 1029 PC-EFFTA---------------GLWD---CGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQ 1073 (1082)
Q Consensus 1029 ~~-~~~d~---------------~l~~---~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~ 1073 (1082)
.. +..+. .... ......+..+.+++.+|++.||++|||+.|++++
T Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 324 (371)
T 4exu_A 261 PGTEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTH 324 (371)
T ss_dssp CCHHHHTTCSCHHHHHHHHHSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred CcHHHHHHhhhhhhhhhhhccCCCcchhHHHhccccChHHHHHHHHHCCCChhhcCCHHHHhcC
Confidence 10 00000 0000 0012335689999999999999999999999875
No 273
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}
Probab=100.00 E-value=1.5e-34 Score=331.49 Aligned_cols=265 Identities=22% Similarity=0.325 Sum_probs=191.9
Q ss_pred HHHHHHhcCccccceecccCceEEEEEEEc-CCeEEEEEEeecCccccHHHHHHHHHHHhccCCCceeeEeeeeccCCe-
Q 045553 794 ENVVRATAGFNVQNCIGSGGFGATYKAEII-PGVVVAVKRLSVGRFQGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAE- 871 (1082)
Q Consensus 794 ~~~~~~~~~~~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~- 871 (1082)
.......++|++.+.||+|+||.||+|+.. +|+.||||++..... ....+.+|++.++.++||||+++++++.....
T Consensus 16 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~ 94 (360)
T 3e3p_A 16 ERSRKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPR-FRNRELQIMQDLAVLHHPNIVQLQSYFYTLGER 94 (360)
T ss_dssp HHHHHHHTTEEEC----------CEEEEETTTCCEEEEEEEECCTT-CCCHHHHHHHHHHHHCCTTBCCEEEEEEEECSS
T ss_pred hhchhhccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCcc-ccHHHHHHHHHHHhcCCCCcccHHHhhhccccc
Confidence 445567789999999999999999999764 689999999865432 23456778888899999999999999865333
Q ss_pred ------EEEEEeecCCCCHHHHHhh--CCCCCCCHHHHHHHHHHHHHHHHHHh--hCCCCCeEeccCCCCCEEEcC-CCc
Q 045553 872 ------MFLIYNYLPGGNLEKFIQD--RPRRTVEWSMLHKIALDVARALAYLH--DECVPRVLHRDIKPSNILLDN-NLN 940 (1082)
Q Consensus 872 ------~~lV~E~~~~gsL~~~l~~--~~~~~l~~~~~~~i~~~i~~~L~~LH--~~~~~~ivH~Dlk~~Nill~~-~~~ 940 (1082)
.++||||+++ ++...+.. .....+++..+..++.|++.|+.||| +. +|+||||||+||+++. ++.
T Consensus 95 ~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~---~ivH~Dlkp~NIll~~~~~~ 170 (360)
T 3e3p_A 95 DRRDIYLNVVMEYVPD-TLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPSV---NVCHRDIKPHNVLVNEADGT 170 (360)
T ss_dssp CTTCEEEEEEEECCSC-BHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTSTTT---CCBCSCCCGGGEEEETTTTE
T ss_pred cccceeEEEEeecccc-cHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhCCCC---CeecCcCCHHHEEEeCCCCc
Confidence 7899999965 65555442 23567899999999999999999999 87 9999999999999997 899
Q ss_pred EEEeecccceecCCCCCccccCcccCCCcccchhcccC-CCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHH
Q 045553 941 AYLSDFGLARLLGTSETHATTDVAGTFGYVAPEYAMTC-RVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAW 1019 (1082)
Q Consensus 941 ~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~ 1019 (1082)
+||+|||+++....... .....||+.|+|||++.+. .++.++|||||||++|||++|+.||.... ....
T Consensus 171 ~kl~Dfg~a~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~--------~~~~ 240 (360)
T 3e3p_A 171 LKLCDFGSAKKLSPSEP--NVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDN--------SAGQ 240 (360)
T ss_dssp EEECCCTTCBCCCTTSC--CCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSS--------HHHH
T ss_pred EEEeeCCCceecCCCCC--cccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCCC--------hHHH
Confidence 99999999987654332 2345789999999998765 48999999999999999999999997431 1111
Q ss_pred HHHHHh-cCCC-c-------------ccccc------ccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 045553 1020 ASMLLL-QGRP-C-------------EFFTA------GLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQ 1073 (1082)
Q Consensus 1020 ~~~~~~-~~~~-~-------------~~~d~------~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~ 1073 (1082)
...... .+.. . ...+. ......+...+.++.+++.+|++.||++|||+.|++++
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 315 (360)
T 3e3p_A 241 LHEIVRVLGCPSREVLRKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALCH 315 (360)
T ss_dssp HHHHHHHHCCCCHHHHHHHCTTCCCGGGGCCCCCCHHHHTTTCCCTTHHHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred HHHHHHHcCCCCHHHHHhcccchhhccccccccCCcccccchhhccccHHHHHHHHHHhccCccccCCHHHHhcC
Confidence 111111 0000 0 00000 00011122356789999999999999999999999875
No 274
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*
Probab=100.00 E-value=3.4e-34 Score=327.72 Aligned_cols=259 Identities=19% Similarity=0.301 Sum_probs=203.3
Q ss_pred hcCccccceecccCceEEEEEEEc-CC-eEEEEEEeecCccccHHHHHHHHHHHhccCCCc------eeeEeeeeccCCe
Q 045553 800 TAGFNVQNCIGSGGFGATYKAEII-PG-VVVAVKRLSVGRFQGVQQFAAEIRTLGRVQHPN------LVTLIGYHVSEAE 871 (1082)
Q Consensus 800 ~~~~~~~~~lg~G~~g~Vy~a~~~-~~-~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~n------iv~l~~~~~~~~~ 871 (1082)
.++|++.+.||+|+||+||+|... ++ ..||+|++... ....+.+.+|++++++++|++ ++.+.+++...+.
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~ 96 (355)
T 2eu9_A 18 QERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNV-GKYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFHGH 96 (355)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEETTE
T ss_pred cccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEccc-ccchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeeeCCe
Confidence 468999999999999999999764 34 78999998754 234567888999999997765 8999999999999
Q ss_pred EEEEEeecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEE----------------
Q 045553 872 MFLIYNYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILL---------------- 935 (1082)
Q Consensus 872 ~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill---------------- 935 (1082)
.++||||+ ++++.+++.......+++..+..++.|++.||+|||+. +|+||||||+||++
T Consensus 97 ~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~---~ivH~Dlkp~NIll~~~~~~~~~~~~~~~~ 172 (355)
T 2eu9_A 97 MCIAFELL-GKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLHEN---QLTHTDLKPENILFVNSEFETLYNEHKSCE 172 (355)
T ss_dssp EEEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEESCCCEEEEECCC-CCC
T ss_pred EEEEEecc-CCChHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEeccccccccccccccc
Confidence 99999999 77888888776556799999999999999999999999 99999999999999
Q ss_pred ---cCCCcEEEeecccceecCCCCCccccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCC
Q 045553 936 ---DNNLNAYLSDFGLARLLGTSETHATTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELISDKKALDPSFCSFGN 1012 (1082)
Q Consensus 936 ---~~~~~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~ 1012 (1082)
+.++.+||+|||+++..... .....||+.|+|||++.+..++.++|||||||++|||++|+.||....
T Consensus 173 ~~~~~~~~~kl~Dfg~~~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~----- 243 (355)
T 2eu9_A 173 EKSVKNTSIRVADFGSATFDHEH----HTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHE----- 243 (355)
T ss_dssp EEEESCCCEEECCCTTCEETTSC----CCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSS-----
T ss_pred ccccCCCcEEEeecCcccccccc----ccCCcCCCcccCCeeeecCCCCCccchHHHHHHHHHHHhCCCCCCCCC-----
Confidence 56789999999999875432 234579999999999999999999999999999999999999997421
Q ss_pred CccHHHHHHHHHhcCCCccccc----------cc-c--------------------CCCCChHHHHHHHHHHHHcccCCC
Q 045553 1013 GFNIVAWASMLLLQGRPCEFFT----------AG-L--------------------WDCGPHDDLIEMLNLAIMCTGESL 1061 (1082)
Q Consensus 1013 ~~~~~~~~~~~~~~~~~~~~~d----------~~-l--------------------~~~~~~~~~~~l~~li~~cl~~~p 1061 (1082)
.......+.... ......+.. .. . ...........+.+++.+|++.||
T Consensus 244 ~~~~~~~~~~~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP 322 (355)
T 2eu9_A 244 NREHLVMMEKIL-GPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEFDP 322 (355)
T ss_dssp HHHHHHHHHHHH-CCCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSST
T ss_pred HHHHHHHHHHHc-CCCcHHHhhhccchhhhcccccccccccchhccccccCCcccccccccchhHHHHHHHHHHHhcCCh
Confidence 111111111111 110000000 00 0 001123446689999999999999
Q ss_pred CCCCCHHHHHHH
Q 045553 1062 SSRPSMRQVAQQ 1073 (1082)
Q Consensus 1062 ~~RPt~~ev~~~ 1073 (1082)
++|||+.|++++
T Consensus 323 ~~Rpt~~e~l~h 334 (355)
T 2eu9_A 323 AQRITLAEALLH 334 (355)
T ss_dssp TTSCCHHHHTTS
T ss_pred hhCcCHHHHhcC
Confidence 999999999853
No 275
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*
Probab=100.00 E-value=2.2e-34 Score=337.60 Aligned_cols=251 Identities=22% Similarity=0.315 Sum_probs=189.8
Q ss_pred cCccccceecccCceEEEEEEEcCCeEEEEEEeecCccccHHHHHHHHHHHhcc-CCCceeeEeeeeccCCeEEEEEeec
Q 045553 801 AGFNVQNCIGSGGFGATYKAEIIPGVVVAVKRLSVGRFQGVQQFAAEIRTLGRV-QHPNLVTLIGYHVSEAEMFLIYNYL 879 (1082)
Q Consensus 801 ~~~~~~~~lg~G~~g~Vy~a~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lV~E~~ 879 (1082)
+.|.+.+.||+|+||+||.+...+|+.||||++... ..+.+.+|+++++++ +||||+++++++.+....++||||+
T Consensus 15 ~~~~~~~~LG~G~~g~V~~~~~~~g~~vAvK~~~~~---~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~lv~E~~ 91 (434)
T 2rio_A 15 NLVVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLID---FCDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELC 91 (434)
T ss_dssp SCEEEEEEEEECSTTCEEEEEESSSSEEEEEEEEGG---GHHHHHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCC
T ss_pred heeeccCeEeeCCCeEEEEEEEECCeEEEEEEEcHH---HHHHHHHHHHHHHhccCCCCcCeEEEEEecCCeEEEEEecC
Confidence 345567889999999998877778999999998653 345678899999876 8999999999999999999999999
Q ss_pred CCCCHHHHHhhCCCCC-----CCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCC-------------CcE
Q 045553 880 PGGNLEKFIQDRPRRT-----VEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNN-------------LNA 941 (1082)
Q Consensus 880 ~~gsL~~~l~~~~~~~-----l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~-------------~~~ 941 (1082)
. |+|.+++....... .++..++.++.||+.||+|||+. +|+||||||+||+++.+ +.+
T Consensus 92 ~-gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDLkp~NILl~~~~~~~~~~~~~~~~~~~ 167 (434)
T 2rio_A 92 N-LNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSL---KIIHRDLKPQNILVSTSSRFTADQQTGAENLRI 167 (434)
T ss_dssp S-EEHHHHHHTC------------CCHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEECCHHHHSCCTTCCCSCEE
T ss_pred C-CCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEecCcccccccccCCCceEE
Confidence 5 69999998653211 13334678999999999999999 99999999999999754 489
Q ss_pred EEeecccceecCCCCCc---cccCcccCCCcccchhccc-------CCCCchhhHHHHHHHHHHHHh-CCCCCCCCccCC
Q 045553 942 YLSDFGLARLLGTSETH---ATTDVAGTFGYVAPEYAMT-------CRVSDKADVYSFGVVLLELIS-DKKALDPSFCSF 1010 (1082)
Q Consensus 942 kl~DfGla~~~~~~~~~---~~~~~~gt~~y~aPE~~~~-------~~~~~~~Dv~slGvll~ellt-g~~p~~~~~~~~ 1010 (1082)
||+|||+++........ ......||+.|+|||++.+ ..++.++|||||||++|||++ |+.||......
T Consensus 168 kL~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~- 246 (434)
T 2rio_A 168 LISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSR- 246 (434)
T ss_dssp EECCCTTCEECCC--------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCSTTTH-
T ss_pred EEcccccceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCCCchhh-
Confidence 99999999987543322 2234579999999999975 678999999999999999999 99998643211
Q ss_pred CCCccHHHHHHHHHhcCCCccccccccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 045553 1011 GNGFNIVAWASMLLLQGRPCEFFTAGLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQ 1072 (1082)
Q Consensus 1011 ~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~ 1072 (1082)
.. ......... +......+...+.++.+++.+|++.||++||++.||++
T Consensus 247 -----~~----~i~~~~~~~----~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~ 295 (434)
T 2rio_A 247 -----ES----NIIRGIFSL----DEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLR 295 (434)
T ss_dssp -----HH----HHHHTCCCC----CCCTTCCCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred -----HH----HHhcCCCCc----ccccccccccchHHHHHHHHHHhhCChhhCCCHHHHHh
Confidence 11 111111100 01111123466788999999999999999999999986
No 276
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*
Probab=100.00 E-value=2.2e-34 Score=325.23 Aligned_cols=255 Identities=25% Similarity=0.356 Sum_probs=180.4
Q ss_pred hcCccccceecccCceEEEEEEEc-CCeEEEEEEeecCcc-ccHHHHHHHHH-HHhccCCCceeeEeeeeccCCeEEEEE
Q 045553 800 TAGFNVQNCIGSGGFGATYKAEII-PGVVVAVKRLSVGRF-QGVQQFAAEIR-TLGRVQHPNLVTLIGYHVSEAEMFLIY 876 (1082)
Q Consensus 800 ~~~~~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~~-~~~~~~~~e~~-~l~~l~h~niv~l~~~~~~~~~~~lV~ 876 (1082)
.++|++.+.||+|+||.||+|... +|+.||||++..... ....++..|+. +++.++||||+++++++.+.+..++||
T Consensus 21 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~~~~lv~ 100 (327)
T 3aln_A 21 AEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWICM 100 (327)
T ss_dssp SCSEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCCCHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HHHhhehheeccCCCEEEEEEEEcCCCCEEEEEEeecccCchHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCCceEEEE
Confidence 367899999999999999999764 689999999976532 33445556665 778889999999999999999999999
Q ss_pred eecCCCCHHHHHhh---CCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecC
Q 045553 877 NYLPGGNLEKFIQD---RPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLG 953 (1082)
Q Consensus 877 E~~~~gsL~~~l~~---~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~ 953 (1082)
||++ ++|.+++.. .....+++..+..++.|++.||+|||+.. +|+||||||+||+++.++.+||+|||+++...
T Consensus 101 e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~--~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~ 177 (327)
T 3aln_A 101 ELMS-TSFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENL--KIIHRDIKPSNILLDRSGNIKLCDFGISGQLV 177 (327)
T ss_dssp CCCS-EEHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHHH--SCCCSCCCGGGEEEETTTEEEECCCSSSCC--
T ss_pred eecC-CChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhccC--CEeECCCCHHHEEEcCCCCEEEccCCCceecc
Confidence 9996 588887763 22467899999999999999999999953 89999999999999999999999999998764
Q ss_pred CCCCccccCcccCCCcccchhc----ccCCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCCC
Q 045553 954 TSETHATTDVAGTFGYVAPEYA----MTCRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQGRP 1029 (1082)
Q Consensus 954 ~~~~~~~~~~~gt~~y~aPE~~----~~~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1029 (1082)
.... .....|++.|+|||++ .+..++.++||||||+++|||++|+.||...... .+.+. ..
T Consensus 178 ~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~-------~~~~~------~~ 242 (327)
T 3aln_A 178 DSIA--KTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSV-------FDQLT------QV 242 (327)
T ss_dssp ------------------------------CCSHHHHHHHHHHHHHHHHSCCCSSCC--------------C------CC
T ss_pred cccc--cccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcchH-------HHHHH------HH
Confidence 3322 2334689999999998 4667899999999999999999999999742111 00000 00
Q ss_pred ccccccccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 045553 1030 CEFFTAGLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQ 1072 (1082)
Q Consensus 1030 ~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~ 1072 (1082)
.....+.+........+..+.+++.+||+.||++||++.||++
T Consensus 243 ~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~ 285 (327)
T 3aln_A 243 VKGDPPQLSNSEEREFSPSFINFVNLCLTKDESKRPKYKELLK 285 (327)
T ss_dssp CCSCCCCCCCCSSCCCCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred hcCCCCCCCCcccccCCHHHHHHHHHHhhCChhhCcCHHHHHh
Confidence 0000011111112234568999999999999999999999976
No 277
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}
Probab=100.00 E-value=3.1e-34 Score=327.62 Aligned_cols=253 Identities=21% Similarity=0.315 Sum_probs=197.4
Q ss_pred hcCccccceecccCceEEEEEEEc-CCeEEEEEEeecCc--cccHHHHHHHHHHHhccCCCceeeEeeeeccCCe-----
Q 045553 800 TAGFNVQNCIGSGGFGATYKAEII-PGVVVAVKRLSVGR--FQGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAE----- 871 (1082)
Q Consensus 800 ~~~~~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~----- 871 (1082)
..+|.+.+.||+|+||.||+|... +|+.||||++.... ....+.+.+|+.++++++||||+++++++.....
T Consensus 23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 102 (353)
T 3coi_A 23 PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFY 102 (353)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCC
T ss_pred CceEEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEecccccccce
Confidence 467999999999999999999754 68999999996543 2335678899999999999999999999887653
Q ss_pred -EEEEEeecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccce
Q 045553 872 -MFLIYNYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLAR 950 (1082)
Q Consensus 872 -~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~ 950 (1082)
.++||||++ ++|.+++.. .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++
T Consensus 103 ~~~lv~e~~~-~~l~~~~~~----~~~~~~~~~i~~qi~~al~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~ 174 (353)
T 3coi_A 103 DFYLVMPFMQ-TDLQKIMGL----KFSEEKIQYLVYQMLKGLKYIHSA---GVVHRDLKPGNLAVNEDCELKILDFGLAR 174 (353)
T ss_dssp CCEEEEECCS-EEGGGTTTS----CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECTTCCEEECSTTCTT
T ss_pred eEEEEecccc-CCHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEeECCCCcEEEeeccccc
Confidence 599999996 688887753 489999999999999999999999 99999999999999999999999999998
Q ss_pred ecCCCCCccccCcccCCCcccchhccc-CCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHh-cCC
Q 045553 951 LLGTSETHATTDVAGTFGYVAPEYAMT-CRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLL-QGR 1028 (1082)
Q Consensus 951 ~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~-~~~ 1028 (1082)
..... .....||+.|+|||++.+ ..++.++||||+|+++|||++|+.||.... ..+.+..... .+.
T Consensus 175 ~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~--------~~~~~~~i~~~~~~ 242 (353)
T 3coi_A 175 HADAE----MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKD--------YLDQLTQILKVTGV 242 (353)
T ss_dssp C------------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSSC--------HHHHHHHHHHHHCB
T ss_pred CCCCC----ccccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCCC--------HHHHHHHHHHHhCC
Confidence 65322 234578999999999887 678999999999999999999999997421 1122222111 010
Q ss_pred Ccc-c-------------------cccccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 045553 1029 PCE-F-------------------FTAGLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQ 1073 (1082)
Q Consensus 1029 ~~~-~-------------------~d~~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~ 1073 (1082)
... . ....+ .......+..+.+++.+|++.||++||++.|++++
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~h 306 (353)
T 3coi_A 243 PGTEFVQKLNDKAAKSYIQSLPQTPRKDF-TQLFPRASPQAADLLEKMLELDVDKRLTAAQALTH 306 (353)
T ss_dssp CCHHHHTTCSCHHHHHHHHTSCBCSSCCT-TTTCTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred CCHHHHHHHhhHHHHHHHHhCcCCCCccH-HHhcCCcCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence 000 0 00000 01123456789999999999999999999999864
No 278
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Probab=100.00 E-value=7.8e-35 Score=326.68 Aligned_cols=244 Identities=25% Similarity=0.385 Sum_probs=193.6
Q ss_pred HHHhcCccccceecccCceEEEEEEE-cCCeEEEEEEeecCccc------cHHHHHHHHHHHhcc----CCCceeeEeee
Q 045553 797 VRATAGFNVQNCIGSGGFGATYKAEI-IPGVVVAVKRLSVGRFQ------GVQQFAAEIRTLGRV----QHPNLVTLIGY 865 (1082)
Q Consensus 797 ~~~~~~~~~~~~lg~G~~g~Vy~a~~-~~~~~vavK~~~~~~~~------~~~~~~~e~~~l~~l----~h~niv~l~~~ 865 (1082)
....++|++.+.||+|+||.||+|.. .+++.||||++...... ....+.+|+++++++ +||||++++++
T Consensus 27 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~~ 106 (312)
T 2iwi_A 27 EAFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLDW 106 (312)
T ss_dssp ------CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEEE
T ss_pred hhhhhceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEEE
Confidence 34567899999999999999999965 46899999999755322 223456789988888 89999999999
Q ss_pred eccCCeEEEEEee-cCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEc-CCCcEEE
Q 045553 866 HVSEAEMFLIYNY-LPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLD-NNLNAYL 943 (1082)
Q Consensus 866 ~~~~~~~~lV~E~-~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~-~~~~~kl 943 (1082)
+...+..++|||| +.+++|.+++... ..+++..++.++.|++.||+|||+. +|+||||||+||+++ .++.+||
T Consensus 107 ~~~~~~~~~v~e~~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~kl 181 (312)
T 2iwi_A 107 FETQEGFMLVLERPLPAQDLFDYITEK--GPLGEGPSRCFFGQVVAAIQHCHSR---GVVHRDIKDENILIDLRRGCAKL 181 (312)
T ss_dssp C-----CEEEEECCSSEEEHHHHHHHH--CSCCHHHHHHHHHHHHHHHHHHHHH---TEECCCCSGGGEEEETTTTEEEE
T ss_pred EecCCeEEEEEEecCCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCChhhEEEeCCCCeEEE
Confidence 9999999999999 7899999999874 4689999999999999999999999 999999999999999 8899999
Q ss_pred eecccceecCCCCCccccCcccCCCcccchhcccCCCC-chhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHH
Q 045553 944 SDFGLARLLGTSETHATTDVAGTFGYVAPEYAMTCRVS-DKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASM 1022 (1082)
Q Consensus 944 ~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~ 1022 (1082)
+|||+++...... .....|+..|+|||++.+..+. .++||||+|+++|||++|+.||.... .
T Consensus 182 ~dfg~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~----------~---- 244 (312)
T 2iwi_A 182 IDFGSGALLHDEP---YTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQ----------E---- 244 (312)
T ss_dssp CCCSSCEECCSSC---BCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHH----------H----
T ss_pred EEcchhhhcccCc---ccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCChH----------H----
Confidence 9999998765432 2345689999999999876664 58999999999999999999986310 1
Q ss_pred HHhcCCCccccccccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 045553 1023 LLLQGRPCEFFTAGLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQ 1073 (1082)
Q Consensus 1023 ~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~ 1073 (1082)
.. .... ..+......+.+++.+|++.+|++||++.|++++
T Consensus 245 ~~-~~~~----------~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~ 284 (312)
T 2iwi_A 245 IL-EAEL----------HFPAHVSPDCCALIRRCLAPKPSSRPSLEEILLD 284 (312)
T ss_dssp HH-HTCC----------CCCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHHS
T ss_pred Hh-hhcc----------CCcccCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 11 1100 1223445678999999999999999999999874
No 279
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...
Probab=100.00 E-value=8.2e-35 Score=327.47 Aligned_cols=242 Identities=26% Similarity=0.395 Sum_probs=200.5
Q ss_pred HhcCccccceecccCceEEEEEEE-cCCeEEEEEEeecCccc------cHHHHHHHHHHHhccC--CCceeeEeeeeccC
Q 045553 799 ATAGFNVQNCIGSGGFGATYKAEI-IPGVVVAVKRLSVGRFQ------GVQQFAAEIRTLGRVQ--HPNLVTLIGYHVSE 869 (1082)
Q Consensus 799 ~~~~~~~~~~lg~G~~g~Vy~a~~-~~~~~vavK~~~~~~~~------~~~~~~~e~~~l~~l~--h~niv~l~~~~~~~ 869 (1082)
...+|++.+.||+|+||.||+|.. .+++.||||++...... ..+.+.+|+.++++++ |+||+++++++...
T Consensus 41 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~~~~ 120 (320)
T 3a99_A 41 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERP 120 (320)
T ss_dssp CTTTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEECS
T ss_pred ccCceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEEecC
Confidence 456799999999999999999965 46899999999754321 2245678999999996 59999999999999
Q ss_pred CeEEEEEeecCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEc-CCCcEEEeecc
Q 045553 870 AEMFLIYNYLPG-GNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLD-NNLNAYLSDFG 947 (1082)
Q Consensus 870 ~~~~lV~E~~~~-gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~-~~~~~kl~DfG 947 (1082)
+..++||||+.+ ++|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+||+++ .++.+||+|||
T Consensus 121 ~~~~lv~e~~~~~~~L~~~l~~~--~~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~~kL~Dfg 195 (320)
T 3a99_A 121 DSFVLILERPEPVQDLFDFITER--GALQEELARSFFWQVLEAVRHCHNC---GVLHRDIKDENILIDLNRGELKLIDFG 195 (320)
T ss_dssp SEEEEEEECCSSEEEHHHHHHHH--CSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTTEEEECCCT
T ss_pred CcEEEEEEcCCCCccHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHC---CcEeCCCCHHHEEEeCCCCCEEEeeCc
Confidence 999999999976 8999999873 4689999999999999999999999 999999999999999 78999999999
Q ss_pred cceecCCCCCccccCcccCCCcccchhcccCCC-CchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhc
Q 045553 948 LARLLGTSETHATTDVAGTFGYVAPEYAMTCRV-SDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQ 1026 (1082)
Q Consensus 948 la~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 1026 (1082)
+++..... ......||+.|+|||++.+..+ +.++||||||+++|||++|+.||.... ....
T Consensus 196 ~~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~--------------~~~~- 257 (320)
T 3a99_A 196 SGALLKDT---VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE--------------EIIR- 257 (320)
T ss_dssp TCEECCSS---CBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHH--------------HHHH-
T ss_pred cccccccc---cccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCChh--------------hhhc-
Confidence 99876533 2234569999999999987665 678999999999999999999986321 0111
Q ss_pred CCCccccccccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 045553 1027 GRPCEFFTAGLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQ 1073 (1082)
Q Consensus 1027 ~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~ 1073 (1082)
+.. ..+...+.++.+++.+||+.||++||++.||+++
T Consensus 258 ~~~----------~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h 294 (320)
T 3a99_A 258 GQV----------FFRQRVSSECQHLIRWCLALRPSDRPTFEEIQNH 294 (320)
T ss_dssp CCC----------CCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred ccc----------cccccCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 110 0122334678999999999999999999999874
No 280
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}
Probab=100.00 E-value=3.5e-34 Score=334.63 Aligned_cols=249 Identities=23% Similarity=0.337 Sum_probs=189.5
Q ss_pred hcCccccceecccCceEEEEEEEcCCeEEEEEEeecCccccHHHHHHHHHHHhcc-CCCceeeEeeeeccCCeEEEEEee
Q 045553 800 TAGFNVQNCIGSGGFGATYKAEIIPGVVVAVKRLSVGRFQGVQQFAAEIRTLGRV-QHPNLVTLIGYHVSEAEMFLIYNY 878 (1082)
Q Consensus 800 ~~~~~~~~~lg~G~~g~Vy~a~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lV~E~ 878 (1082)
..+|++.++||+|+||+||.....+++.||||++...... .+.+|+++++++ +||||+++++++.+....++||||
T Consensus 23 ~~~y~~~~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~~~~---~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv~E~ 99 (432)
T 3p23_A 23 KISFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPECFS---FADREVQLLRESDEHPNVIRYFCTEKDRQFQYIAIEL 99 (432)
T ss_dssp TEEEEEEEEEEECGGGCEEEEEESSSSEEEEEEECTTTEE---ECHHHHHHHHHSCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred cEEEecCCeeecCcCEEEEEEEEeCCeEEEEEEECHHHHH---HHHHHHHHHHhccCCCCcCeEEEEEecCCEEEEEEEC
Confidence 3468889999999999977666677999999999754332 256799999999 799999999999999999999999
Q ss_pred cCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcC-----CCcEEEeecccceecC
Q 045553 879 LPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDN-----NLNAYLSDFGLARLLG 953 (1082)
Q Consensus 879 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~-----~~~~kl~DfGla~~~~ 953 (1082)
+. |+|.+++.... ....+..+..++.||+.||+|||+. +|+||||||+||+++. ...+||+|||+++...
T Consensus 100 ~~-g~L~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a~~~~ 174 (432)
T 3p23_A 100 CA-ATLQEYVEQKD-FAHLGLEPITLLQQTTSGLAHLHSL---NIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLA 174 (432)
T ss_dssp CS-EEHHHHHHSSS-CCCCSSCHHHHHHHHHHHHHHHHHT---TCCCCCCSTTSEEECCCBTTTBCCEEECCTTEEECC-
T ss_pred CC-CCHHHHHHhcC-CCccchhHHHHHHHHHHHHHHHHHC---cCEeCCCCHHHEEEecCCCCCceeEEEecccceeecc
Confidence 95 69999998753 3344556778999999999999999 9999999999999953 3468899999998775
Q ss_pred CCCC--ccccCcccCCCcccchhcc---cCCCCchhhHHHHHHHHHHHHh-CCCCCCCCccCCCCCccHHHHHHHHHhcC
Q 045553 954 TSET--HATTDVAGTFGYVAPEYAM---TCRVSDKADVYSFGVVLLELIS-DKKALDPSFCSFGNGFNIVAWASMLLLQG 1027 (1082)
Q Consensus 954 ~~~~--~~~~~~~gt~~y~aPE~~~---~~~~~~~~Dv~slGvll~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 1027 (1082)
.... .......||+.|+|||++. ...++.++||||+||++|||++ |..||..... ..... ....
T Consensus 175 ~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~~---------~~~~~-~~~~ 244 (432)
T 3p23_A 175 VGRHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQ---------RQANI-LLGA 244 (432)
T ss_dssp -----------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTTT---------HHHHH-HTTC
T ss_pred CCCcceeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhhH---------HHHHH-Hhcc
Confidence 4322 2334567999999999997 4667889999999999999999 8888853211 11111 1111
Q ss_pred CCccccccccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 045553 1028 RPCEFFTAGLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQ 1072 (1082)
Q Consensus 1028 ~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~ 1072 (1082)
...... ..+......+.+++.+|++.||++||++.||++
T Consensus 245 ~~~~~~------~~~~~~~~~~~~li~~~L~~dP~~Rps~~evl~ 283 (432)
T 3p23_A 245 CSLDCL------HPEKHEDVIARELIEKMIAMDPQKRPSAKHVLK 283 (432)
T ss_dssp CCCTTS------CTTCHHHHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred CCcccc------CccccccHHHHHHHHHHHhCCHhhCCCHHHHHh
Confidence 111111 112345567889999999999999999999985
No 281
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}
Probab=100.00 E-value=9.3e-34 Score=318.80 Aligned_cols=252 Identities=24% Similarity=0.351 Sum_probs=183.8
Q ss_pred hcCccccceecccCceEEEEEEEc-CCeEEEEEEeecCccc--cHHHHHHHHHHHhccCCCceeeEeeeeccCCeEEEEE
Q 045553 800 TAGFNVQNCIGSGGFGATYKAEII-PGVVVAVKRLSVGRFQ--GVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFLIY 876 (1082)
Q Consensus 800 ~~~~~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~~~--~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 876 (1082)
.++|++.+.||+|+||.||+|... +|+.||||++...... ..+.+.++..+++.++||||+++++++.+.+..++||
T Consensus 24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~ 103 (318)
T 2dyl_A 24 INDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIAM 103 (318)
T ss_dssp GGGEEEEEEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred hccccccceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEecCCcEEEEE
Confidence 457899999999999999999765 6899999999765322 2233445556788889999999999999999999999
Q ss_pred eecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhh-CCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCCC
Q 045553 877 NYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHD-ECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGTS 955 (1082)
Q Consensus 877 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~-~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~ 955 (1082)
||+ ++.+..+.... ...+++..+..++.|++.||+|||+ . +|+||||||+||+++.++.+||+|||++......
T Consensus 104 e~~-~~~~~~l~~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~---~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~ 178 (318)
T 2dyl_A 104 ELM-GTCAEKLKKRM-QGPIPERILGKMTVAIVKALYYLKEKH---GVIHRDVKPSNILLDERGQIKLCDFGISGRLVDD 178 (318)
T ss_dssp CCC-SEEHHHHHHHH-TSCCCHHHHHHHHHHHHHHHHHHHHHH---CCCCCCCCGGGEEECTTSCEEECCCTTC------
T ss_pred ecc-CCcHHHHHHHh-ccCCCHHHHHHHHHHHHHHHHHHHhhC---CEEeCCCCHHHEEECCCCCEEEEECCCchhccCC
Confidence 999 55666555432 4568999999999999999999998 6 8999999999999999999999999999766433
Q ss_pred CCccccCcccCCCcccchhcc-----cCCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCCCc
Q 045553 956 ETHATTDVAGTFGYVAPEYAM-----TCRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQGRPC 1030 (1082)
Q Consensus 956 ~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1030 (1082)
. ......|++.|+|||++. ...++.++||||||+++|||++|+.||.... .............. .
T Consensus 179 ~--~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~-------~~~~~~~~~~~~~~-~ 248 (318)
T 2dyl_A 179 K--AKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCK-------TDFEVLTKVLQEEP-P 248 (318)
T ss_dssp ----------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTCC-------SHHHHHHHHHHSCC-C
T ss_pred c--cccccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCCC-------ccHHHHHHHhccCC-C
Confidence 2 223456899999999994 5678899999999999999999999997321 22233333333221 1
Q ss_pred cccccccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 045553 1031 EFFTAGLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQ 1073 (1082)
Q Consensus 1031 ~~~d~~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~ 1073 (1082)
.. ......+.++.+++.+|++.||++||++.|++++
T Consensus 249 ~~-------~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h 284 (318)
T 2dyl_A 249 LL-------PGHMGFSGDFQSFVKDCLTKDHRKRPKYNKLLEH 284 (318)
T ss_dssp CC-------CSSSCCCHHHHHHHHHHTCSCTTTSCCHHHHTTS
T ss_pred CC-------CccCCCCHHHHHHHHHHccCChhHCcCHHHHhhC
Confidence 11 0111234679999999999999999999999763
No 282
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Probab=100.00 E-value=2e-34 Score=346.01 Aligned_cols=267 Identities=23% Similarity=0.337 Sum_probs=203.7
Q ss_pred hcCccccceecccCceEEEEEEE-cCCeEEEEEEeecC-ccccHHHHHHHHHHHhccCCCceeeEeeeecc------CCe
Q 045553 800 TAGFNVQNCIGSGGFGATYKAEI-IPGVVVAVKRLSVG-RFQGVQQFAAEIRTLGRVQHPNLVTLIGYHVS------EAE 871 (1082)
Q Consensus 800 ~~~~~~~~~lg~G~~g~Vy~a~~-~~~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~------~~~ 871 (1082)
.++|++.+.||+|+||.||+|.. .+|+.||||++... .....+.+.+|++++++++||||+++++++.. .+.
T Consensus 13 ~grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~~~ 92 (676)
T 3qa8_A 13 CGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDL 92 (676)
T ss_dssp ----CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCCCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTTSS
T ss_pred CCCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCCCe
Confidence 36899999999999999999965 46899999998754 33445678999999999999999999998765 677
Q ss_pred EEEEEeecCCCCHHHHHhhCC-CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCc---EEEeecc
Q 045553 872 MFLIYNYLPGGNLEKFIQDRP-RRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLN---AYLSDFG 947 (1082)
Q Consensus 872 ~~lV~E~~~~gsL~~~l~~~~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~---~kl~DfG 947 (1082)
.++||||+++|+|.+++.... ...+++..++.++.|++.||+|||+. +|+||||||+||+++.++. +||+|||
T Consensus 93 ~~LVmEy~~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL~yLHs~---gIVHrDLKP~NILl~~~g~~~~vKL~DFG 169 (676)
T 3qa8_A 93 PLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHEN---RIIHRDLKPENIVLQPGPQRLIHKIIDLG 169 (676)
T ss_dssp CCCEEECCSSCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHHHHHHHT---TBCCCCCCSTTEEEECCSSSCEEEECSCC
T ss_pred EEEEEEeCCCCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCHHHeEeecCCCceeEEEcccc
Confidence 899999999999999998743 23688999999999999999999999 9999999999999997664 9999999
Q ss_pred cceecCCCCCccccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcC
Q 045553 948 LARLLGTSETHATTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQG 1027 (1082)
Q Consensus 948 la~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 1027 (1082)
.+....... ......|++.|+|||++.+..++.++||||+|+++|||++|+.||.... ....|........
T Consensus 170 ~a~~~~~~~--~~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~-------~~~~~~~~i~~~~ 240 (676)
T 3qa8_A 170 YAKELDQGE--LCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNW-------QPVQWHGKVREKS 240 (676)
T ss_dssp CCCBTTSCC--CCCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSCSSCCSSC-------HHHHSSTTCC---
T ss_pred ccccccccc--ccccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHHCCCCCCccc-------chhhhhhhhhccc
Confidence 998765433 2344679999999999999999999999999999999999999997532 1122211111000
Q ss_pred CCccccccc------------cCCCCChHHHHHHHHHHHHcccCCCCCCCCHHH-----HHHHHhhhC
Q 045553 1028 RPCEFFTAG------------LWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQ-----VAQQLKQIQ 1078 (1082)
Q Consensus 1028 ~~~~~~d~~------------l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~e-----v~~~L~~i~ 1078 (1082)
......... .........+..+.+++.+|++.||++|||+.| ..+.++.+.
T Consensus 241 ~~~~~~~~~l~g~~~~~~~lp~p~~l~~~ls~~L~dLI~~mL~~DP~kRPTa~elL~hp~F~~l~~iL 308 (676)
T 3qa8_A 241 NEHIVVYDDLTGAVKFSSVLPTPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQNPNVGCFQALDSIL 308 (676)
T ss_dssp ---CCSCCCCSSSCCCCSSSCCSCCCCGGGHHHHHHHHHHHSCSSCC---CCTTCCCCTTHHHHHHHH
T ss_pred chhhhhhhhhccccccccccCCchhhchhhhHHHHHHHHHHccCCHhhCcCHHHHhcCHHHHHHHHHH
Confidence 000000000 011233457889999999999999999999977 445555443
No 283
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=100.00 E-value=1.4e-33 Score=317.80 Aligned_cols=275 Identities=21% Similarity=0.242 Sum_probs=170.1
Q ss_pred CHHHHHHHHhcccCCCCCCCCCC---CCCCCCceeeeeEeeC--------CCCCeeeeecCCCccccccccCCCCCCCCC
Q 045553 1 KNALLQLKSAITEDPLGLTSNWN---PKDTDSCSWHGVTCDP--------LSGRVTSLNLSSNLSRTSCSLLSLPPAAGP 69 (1082)
Q Consensus 1 ~~~l~~~k~~~~~~~~~~~~~W~---~~~~~~c~w~gv~C~~--------~~~~v~~l~l~~~~~~~~~~~~~~~~~~~~ 69 (1082)
++||++||+++..||.+.+++|. ..+.++|.|.||.|+. ...+|+.|+|++|
T Consensus 29 ~~aLl~~k~~~~~~~~~~~~~w~~~~~~~~~~~~~~g~~~~~~~~~l~~~~~~~l~~L~L~~n----------------- 91 (328)
T 4fcg_A 29 HDVLSQWQRHYNADRNRWHSAWRQANSNNPQIETRTGRALKATADLLEDATQPGRVALELRSV----------------- 91 (328)
T ss_dssp HHHHHHHHHHHHHCCTTHHHHHHHHTTTCTTSCCSHHHHHHHHHHHHHHHTSTTCCEEEEESS-----------------
T ss_pred HHHHHHHHHhccCCchhhhhhhcccccccccccccCCcchhhhHHHHhcccccceeEEEccCC-----------------
Confidence 47999999999889988889994 3467899999999952 2234444544431
Q ss_pred CCCcccCcCcccccccccCcccCCCCCCccccccccccCCCCCCEEEcccCCCcccCChhhcCCCCCCEEeCcCCCCCCC
Q 045553 70 GGNFSFHFPCLQLHQHDRGNINSNSSDKLSGNLSRAIGDLTQLRVLLLAFNGFSGELPLEIGQLSLLEILDLSFNSFHGP 149 (1082)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~l~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~ 149 (1082)
++. .+|+.+.++++|++|+|++|.++ .+|..|+.+++|++|+|++|.++ .
T Consensus 92 ---------------------------~l~-~lp~~l~~l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~ 141 (328)
T 4fcg_A 92 ---------------------------PLP-QFPDQAFRLSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-A 141 (328)
T ss_dssp ---------------------------CCS-SCCSCGGGGTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-C
T ss_pred ---------------------------Cch-hcChhhhhCCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-c
Confidence 122 33444444555555555555554 44555555555555555555554 4
Q ss_pred CCccccCCCCCCeEEccCcccccccCccccCCCCCcEEEcccCcccccCCcccccccccccEEEcccCccCCCCCccccC
Q 045553 150 IPPTLQNCSSLRLINLSGNQFNGTIPAFFGQSPGFQVVSLSFNLLSGSVPEEFGDNCVSLEHILLAANSLTGSIPPSLGN 229 (1082)
Q Consensus 150 ~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~ 229 (1082)
+|..++++++|++|+|++|.+.+.+|..+... .++.. +..+++|++|+|++|+++ .+|..+++
T Consensus 142 lp~~l~~l~~L~~L~L~~n~~~~~~p~~~~~~---------------~~~~~-~~~l~~L~~L~L~~n~l~-~lp~~l~~ 204 (328)
T 4fcg_A 142 LPASIASLNRLRELSIRACPELTELPEPLAST---------------DASGE-HQGLVNLQSLRLEWTGIR-SLPASIAN 204 (328)
T ss_dssp CCGGGGGCTTCCEEEEEEETTCCCCCSCSEEE---------------C-CCC-EEESTTCCEEEEEEECCC-CCCGGGGG
T ss_pred CcHHHhcCcCCCEEECCCCCCccccChhHhhc---------------cchhh-hccCCCCCEEECcCCCcC-cchHhhcC
Confidence 45455555555555555544444444433220 00000 113566666666666666 56666666
Q ss_pred CCCccEEEccCCcCCCCcCccccCCCCCCEEeCCCCcCcccCCccccCCCCCcEEEeccccCCcccccCCCCCCcccccC
Q 045553 230 CTELRSLLLSSNMLQGDIPSSFGQLVNLEVLDLSRNFLSGIVPSELGMCKQLKVLVLRNDYGPLYSREHGDLPIQPVVDG 309 (1082)
Q Consensus 230 l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~n~~~~~~~~~~~l~~~~~~~~ 309 (1082)
+++|++|+|++|++++ +|..+..+++|++|+|++|++.+.+|..++.+++|++|++++
T Consensus 205 l~~L~~L~L~~N~l~~-l~~~l~~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~L~~--------------------- 262 (328)
T 4fcg_A 205 LQNLKSLKIRNSPLSA-LGPAIHHLPKLEELDLRGCTALRNYPPIFGGRAPLKRLILKD--------------------- 262 (328)
T ss_dssp CTTCCEEEEESSCCCC-CCGGGGGCTTCCEEECTTCTTCCBCCCCTTCCCCCCEEECTT---------------------
T ss_pred CCCCCEEEccCCCCCc-CchhhccCCCCCEEECcCCcchhhhHHHhcCCCCCCEEECCC---------------------
Confidence 6677777777776663 555566666777777777666666666666777777777665
Q ss_pred CCcccccCCCCCccccCCCCCcEEEcCCCcccCCCCcccccccCCCeEEcCCcccc
Q 045553 310 GEDYNFFDGGLPDSITRLPNLRVFWAPNLNLEGIFPQNWELCSKLEMLNLAHNFFT 365 (1082)
Q Consensus 310 ~~~~n~~~~~~p~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~N~i~ 365 (1082)
|.+.+.+|..+.++++|++|++++|++.+.+|..+..+++|+.+++..|.+.
T Consensus 263 ----n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~iP~~l~~L~~L~~l~l~~~~~~ 314 (328)
T 4fcg_A 263 ----CSNLLTLPLDIHRLTQLEKLDLRGCVNLSRLPSLIAQLPANCIILVPPHLQA 314 (328)
T ss_dssp ----CTTCCBCCTTGGGCTTCCEEECTTCTTCCCCCGGGGGSCTTCEEECCGGGSC
T ss_pred ----CCchhhcchhhhcCCCCCEEeCCCCCchhhccHHHhhccCceEEeCCHHHHH
Confidence 3344556666777777777777777777777777777788888877776665
No 284
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A
Probab=100.00 E-value=1.2e-32 Score=303.81 Aligned_cols=230 Identities=13% Similarity=0.078 Sum_probs=184.5
Q ss_pred hcCccccceecccCceEEEEEEEc-CCeEEEEEEeecCcc---ccHHHHHHHHHHHhccCCCceeeEeeeeccCCeEEEE
Q 045553 800 TAGFNVQNCIGSGGFGATYKAEII-PGVVVAVKRLSVGRF---QGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFLI 875 (1082)
Q Consensus 800 ~~~~~~~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV 875 (1082)
.++|++.+.||+|+||.||+|... +++.||||++..... ...+.+.+|+..+++++||||+++++++.+.+..|+|
T Consensus 30 ~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv 109 (286)
T 3uqc_A 30 NGRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTRAGGLVV 109 (286)
T ss_dssp TTTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEE
T ss_pred cCcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEECCcEEEE
Confidence 357999999999999999999765 489999999976533 2347789999999999999999999999999999999
Q ss_pred EeecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCCC
Q 045553 876 YNYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGTS 955 (1082)
Q Consensus 876 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~ 955 (1082)
|||+++++|.++++.. ....++.+++.|++.||+|||+. +|+||||||+||+++.++.+||+++|
T Consensus 110 ~e~~~g~~L~~~l~~~----~~~~~~~~i~~ql~~aL~~lH~~---givH~Dikp~NIll~~~g~~kl~~~~-------- 174 (286)
T 3uqc_A 110 AEWIRGGSLQEVADTS----PSPVGAIRAMQSLAAAADAAHRA---GVALSIDHPSRVRVSIDGDVVLAYPA-------- 174 (286)
T ss_dssp EECCCEEEHHHHHTTC----CCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEEETTSCEEECSCC--------
T ss_pred EEecCCCCHHHHHhcC----CChHHHHHHHHHHHHHHHHHHHC---CCccCCCCcccEEEcCCCCEEEEecc--------
Confidence 9999999999999642 35567889999999999999999 99999999999999999999998543
Q ss_pred CCccccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCCCcccccc
Q 045553 956 ETHATTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQGRPCEFFTA 1035 (1082)
Q Consensus 956 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 1035 (1082)
|++ .++.++|||||||++|||++|+.||.......... . ....+..
T Consensus 175 -------------~~~-------~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~-~-------------~~~~~~~ 220 (286)
T 3uqc_A 175 -------------TMP-------DANPQDDIRGIGASLYALLVNRWPLPEAGVRSGLA-P-------------AERDTAG 220 (286)
T ss_dssp -------------CCT-------TCCHHHHHHHHHHHHHHHHHSEECSCCCSBCCCSE-E-------------CCBCTTS
T ss_pred -------------ccC-------CCCchhHHHHHHHHHHHHHHCCCCCCcCCcchhhH-H-------------HHHHhcc
Confidence 232 36889999999999999999999997543210000 0 0000000
Q ss_pred ccCC--CCChHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhhCC
Q 045553 1036 GLWD--CGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQQLKQIQP 1079 (1082)
Q Consensus 1036 ~l~~--~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L~~i~~ 1079 (1082)
.... ......+.++.+++.+||+.||++| |+.|+++.|+++..
T Consensus 221 ~~~~~~~~~~~~~~~l~~li~~~l~~dP~~R-s~~el~~~L~~~~~ 265 (286)
T 3uqc_A 221 QPIEPADIDRDIPFQISAVAARSVQGDGGIR-SASTLLNLMQQATA 265 (286)
T ss_dssp CBCCHHHHCTTSCHHHHHHHHHHHCTTSSCC-CHHHHHHHHHHHHC
T ss_pred CCCChhhcccCCCHHHHHHHHHHcccCCccC-CHHHHHHHHHHHhc
Confidence 0000 0112345679999999999999999 99999999998654
No 285
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=100.00 E-value=4.9e-33 Score=344.96 Aligned_cols=239 Identities=23% Similarity=0.305 Sum_probs=194.5
Q ss_pred hcCccccceecccCceEEEEEEEc--CCeEEEEEEeecCc-cccHHHHHHHHHHHhccCCCceeeEeeeeccCCe-----
Q 045553 800 TAGFNVQNCIGSGGFGATYKAEII--PGVVVAVKRLSVGR-FQGVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAE----- 871 (1082)
Q Consensus 800 ~~~~~~~~~lg~G~~g~Vy~a~~~--~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~----- 871 (1082)
.++|++.+.||+|+||+||+|... +|+.||||++.... ......+.+|++++++++||||+++++++...+.
T Consensus 79 ~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~ 158 (681)
T 2pzi_A 79 AGQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDPV 158 (681)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSCEE
T ss_pred CCceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCCce
Confidence 368999999999999999999775 58999999986543 3445678899999999999999999999987655
Q ss_pred EEEEEeecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeeccccee
Q 045553 872 MFLIYNYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARL 951 (1082)
Q Consensus 872 ~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~ 951 (1082)
.|+||||+++++|.+++.. .+++..+..++.||+.||+|||+. +|+||||||+||+++.+ .+||+|||+++.
T Consensus 159 ~~lv~E~~~g~~L~~~~~~----~l~~~~~~~~~~qi~~aL~~lH~~---giiHrDlkp~NIll~~~-~~kl~DFG~a~~ 230 (681)
T 2pzi_A 159 GYIVMEYVGGQSLKRSKGQ----KLPVAEAIAYLLEILPALSYLHSI---GLVYNDLKPENIMLTEE-QLKLIDLGAVSR 230 (681)
T ss_dssp EEEEEECCCCEECC----C----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECSS-CEEECCCTTCEE
T ss_pred eEEEEEeCCCCcHHHHHhC----CCCHHHHHHHHHHHHHHHHHHHHC---CCeecccChHHeEEeCC-cEEEEecccchh
Confidence 7999999999999988754 689999999999999999999999 99999999999999986 899999999987
Q ss_pred cCCCCCccccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCCCcc
Q 045553 952 LGTSETHATTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQGRPCE 1031 (1082)
Q Consensus 952 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1031 (1082)
.... ....||+.|+|||++.+.. +.++|||||||++|||++|..||....... ..
T Consensus 231 ~~~~-----~~~~gt~~y~aPE~~~~~~-~~~sDi~slG~~l~~l~~g~~~~~~~~~~~------------------~~- 285 (681)
T 2pzi_A 231 INSF-----GYLYGTPGFQAPEIVRTGP-TVATDIYTVGRTLAALTLDLPTRNGRYVDG------------------LP- 285 (681)
T ss_dssp TTCC-----SCCCCCTTTSCTTHHHHCS-CHHHHHHHHHHHHHHHHSCCCEETTEECSS------------------CC-
T ss_pred cccC-----CccCCCccccCHHHHcCCC-CCceehhhhHHHHHHHHhCCCCCccccccc------------------cc-
Confidence 6433 3457999999999987754 899999999999999999998876432110 00
Q ss_pred ccccccCCCCChHHHHHHHHHHHHcccCCCCCCC-CHHHHHHHHhhh
Q 045553 1032 FFTAGLWDCGPHDDLIEMLNLAIMCTGESLSSRP-SMRQVAQQLKQI 1077 (1082)
Q Consensus 1032 ~~d~~l~~~~~~~~~~~l~~li~~cl~~~p~~RP-t~~ev~~~L~~i 1077 (1082)
...........+.+++.+|++.||++|| ++.++.+.|.++
T Consensus 286 ------~~~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~ 326 (681)
T 2pzi_A 286 ------EDDPVLKTYDSYGRLLRRAIDPDPRQRFTTAEEMSAQLTGV 326 (681)
T ss_dssp ------TTCHHHHHCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHH
T ss_pred ------ccccccccCHHHHHHHhhhccCChhhCCCHHHHHHHHHHHH
Confidence 0000112345789999999999999999 566666666543
No 286
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=100.00 E-value=1.4e-31 Score=305.06 Aligned_cols=103 Identities=19% Similarity=0.316 Sum_probs=59.3
Q ss_pred cccEEEccCCcccccCccccCCCCCCCEEEccCCCCCCCCcccccCCCCCCEEEcCCCcCCccCchhhhcCcccchhhcc
Q 045553 544 CMKFLSMAGNEFVGLIPQSFTNFDSLRNLNLSRNHLQGPLPSYINKMEDLKFLSLSLNNFTGAIPWELTQLASLEVLELS 623 (1082)
Q Consensus 544 ~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls 623 (1082)
+|++|++++|++++. ..+..+++|++|++++|.+++. ..+..+++|+.|++++|++++..|..|..+++|++|+|+
T Consensus 244 ~L~~L~l~~n~l~~~--~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~ 319 (347)
T 4fmz_A 244 QLTWLEIGTNQISDI--NAVKDLTKLKMLNVGSNQISDI--SVLNNLSQLNSLFLNNNQLGNEDMEVIGGLTNLTTLFLS 319 (347)
T ss_dssp TCCEEECCSSCCCCC--GGGTTCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCGGGHHHHHTCTTCSEEECC
T ss_pred CCCEEECCCCccCCC--hhHhcCCCcCEEEccCCccCCC--hhhcCCCCCCEEECcCCcCCCcChhHhhccccCCEEEcc
Confidence 355555555555443 3455566666666666666643 245566666666666666666666666666666666666
Q ss_pred CcccCCCCCccccCCcccceecccCcccC
Q 045553 624 ANSLSGEIPSEFSKLEHLNVLRLDHNNLT 652 (1082)
Q Consensus 624 ~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 652 (1082)
+|++++..| +..+++|++|++++|+|+
T Consensus 320 ~n~l~~~~~--~~~l~~L~~L~l~~N~i~ 346 (347)
T 4fmz_A 320 QNHITDIRP--LASLSKMDSADFANQVIK 346 (347)
T ss_dssp SSSCCCCGG--GGGCTTCSEESSSCC---
T ss_pred CCccccccC--hhhhhccceeehhhhccc
Confidence 666664433 556666666666666654
No 287
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*
Probab=100.00 E-value=2.3e-32 Score=304.37 Aligned_cols=228 Identities=21% Similarity=0.264 Sum_probs=181.9
Q ss_pred hcCcccc-ceecccCceEEEEEEE-cCCeEEEEEEeecCccccHHHHHHHHHHH-hccCCCceeeEeeeecc----CCeE
Q 045553 800 TAGFNVQ-NCIGSGGFGATYKAEI-IPGVVVAVKRLSVGRFQGVQQFAAEIRTL-GRVQHPNLVTLIGYHVS----EAEM 872 (1082)
Q Consensus 800 ~~~~~~~-~~lg~G~~g~Vy~a~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l-~~l~h~niv~l~~~~~~----~~~~ 872 (1082)
.++|.+. +.||+|+||.||+|.. .+++.||+|++... ..+.+|++++ +..+||||+++++++.. ....
T Consensus 16 ~~~y~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-----~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~ 90 (299)
T 3m2w_A 16 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC-----PKARREVELHWRASQCPHIVRIVDVYENLYAGRKCL 90 (299)
T ss_dssp GGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS-----HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEE
T ss_pred ccchhhcCcccccCCCeEEEEEEEcCCCcEEEEEEeccc-----HHHHHHHHHHHHhccCCCchhHHhhhhhhcCCCceE
Confidence 4567776 7899999999999975 46899999998642 4567888887 66699999999998876 6788
Q ss_pred EEEEeecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcC---CCcEEEeecccc
Q 045553 873 FLIYNYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDN---NLNAYLSDFGLA 949 (1082)
Q Consensus 873 ~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~---~~~~kl~DfGla 949 (1082)
++||||+++|+|.+++.......+++..+..++.|++.||+|||+. +|+||||||+||+++. ++.+||+|||++
T Consensus 91 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a 167 (299)
T 3m2w_A 91 LIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDFGFA 167 (299)
T ss_dssp EEEECCCCSCBHHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSTTCCEEECCCTTC
T ss_pred EEEEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEecCCCCCcEEEeccccc
Confidence 9999999999999999987666899999999999999999999999 9999999999999998 789999999999
Q ss_pred eecCCCCCccccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCCC
Q 045553 950 RLLGTSETHATTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELISDKKALDPSFCSFGNGFNIVAWASMLLLQGRP 1029 (1082)
Q Consensus 950 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1029 (1082)
.... +..++.++||||+||++|||++|+.||....... ......
T Consensus 168 ~~~~-----------------------~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~-------------~~~~~~ 211 (299)
T 3m2w_A 168 KETT-----------------------GEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLA-------------ISPGMK 211 (299)
T ss_dssp EECT-----------------------TCGGGGHHHHHHHHHHHHHHHHSSCSCCC--------------------CCSC
T ss_pred cccc-----------------------cccCCchhhHHHHHHHHHHHHHCCCCCCCCcchh-------------hhHHHH
Confidence 7542 1346789999999999999999999996432110 000000
Q ss_pred ccccccccCCCCC----hHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 045553 1030 CEFFTAGLWDCGP----HDDLIEMLNLAIMCTGESLSSRPSMRQVAQQ 1073 (1082)
Q Consensus 1030 ~~~~d~~l~~~~~----~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~ 1073 (1082)
........ ..+ ...+.++.+++.+|++.||++||++.|++++
T Consensus 212 ~~~~~~~~--~~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~h 257 (299)
T 3m2w_A 212 TRIRMGQY--EFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNH 257 (299)
T ss_dssp CSSCTTCC--SSCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred HHHhhccc--cCCchhcccCCHHHHHHHHHHcccChhhCCCHHHHhcC
Confidence 00000000 111 2345789999999999999999999999874
No 288
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=100.00 E-value=2.5e-32 Score=316.45 Aligned_cols=332 Identities=21% Similarity=0.222 Sum_probs=230.3
Q ss_pred cccccEEEcccCccCCCCCccccCCCCccEEEccCCcCCCCcCccccCCCCCCEEeCCCCcCcccCCccccCCCCCcEEE
Q 045553 206 CVSLEHILLAANSLTGSIPPSLGNCTELRSLLLSSNMLQGDIPSSFGQLVNLEVLDLSRNFLSGIVPSELGMCKQLKVLV 285 (1082)
Q Consensus 206 l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~ 285 (1082)
+.+++.|++++|.++...+..+..+++|++|+|++|.+++..+..|..+++|++|+|++|++++..|..|+.+++|++|+
T Consensus 44 l~~l~~l~l~~~~l~~l~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 123 (390)
T 3o6n_A 44 LNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLV 123 (390)
T ss_dssp GCCCSEEEEESCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred cCCceEEEecCCchhhCChhHhcccccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEE
Confidence 56777788887777744444467777777778877777766666777777777777777777766666666666666666
Q ss_pred eccccCCcccccCCCCCCcccccCCCcccccCCCCCccccCCCCCcEEEcCCCcccCCCCcccccccCCCeEEcCCcccc
Q 045553 286 LRNDYGPLYSREHGDLPIQPVVDGGEDYNFFDGGLPDSITRLPNLRVFWAPNLNLEGIFPQNWELCSKLEMLNLAHNFFT 365 (1082)
Q Consensus 286 l~~n~~~~~~~~~~~l~~~~~~~~~~~~n~~~~~~p~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~N~i~ 365 (1082)
+++| .+..+.+..|..+++|++|+|++|+++
T Consensus 124 L~~n-------------------------------------------------~l~~l~~~~~~~l~~L~~L~L~~n~l~ 154 (390)
T 3o6n_A 124 LERN-------------------------------------------------DLSSLPRGIFHNTPKLTTLSMSNNNLE 154 (390)
T ss_dssp CCSS-------------------------------------------------CCCCCCTTTTTTCTTCCEEECCSSCCC
T ss_pred CCCC-------------------------------------------------ccCcCCHHHhcCCCCCcEEECCCCccC
Confidence 6553 333333333444445555555555554
Q ss_pred CCCCccccCCCCCCEEecCCCcCcccCCCCcccCcccEEEecCCcceecCCCCCCcccccccccccccceeeeeeccccc
Q 045553 366 GQIPASLGNCKSLYFLDLSSNNLTGLLPEEVSVPCMAVFNVSQNLLSGEIPRISHSECSKMSVNWSMSQVDLIGFYTAFF 445 (1082)
Q Consensus 366 ~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 445 (1082)
+..+..|..+++|+.|+|++|++++.. ...++.|+.|++++|.+++..
T Consensus 155 ~~~~~~~~~l~~L~~L~l~~n~l~~~~--~~~l~~L~~L~l~~n~l~~~~------------------------------ 202 (390)
T 3o6n_A 155 RIEDDTFQATTSLQNLQLSSNRLTHVD--LSLIPSLFHANVSYNLLSTLA------------------------------ 202 (390)
T ss_dssp BCCTTTTSSCTTCCEEECCSSCCSBCC--GGGCTTCSEEECCSSCCSEEE------------------------------
T ss_pred ccChhhccCCCCCCEEECCCCcCCccc--cccccccceeecccccccccC------------------------------
Confidence 444444555555555555555554431 122344555555544443100
Q ss_pred ccccccCcCCCCCCCCCceeEeeccCCcccCCCCCccccCCCccccccceeeeccCCCccccCCcccccccCCceeEEEc
Q 045553 446 YENALTSCAPFSSPSNGLFILHDFSNNLFTGPVPPFLIDSDSLSSRPYYGFWLSGNSLKGNLSTYPFDLCLSLDGLIFDI 525 (1082)
Q Consensus 446 ~~~~~~~~~~~~~~~~~~~~~~~l~~n~~~g~~p~~~~~~~~l~~~~~~~~~~~~n~~~~~l~~~p~~~~~~~~l~~l~l 525 (1082)
. ...++.|++
T Consensus 203 --------------------------------~--------------------------------------~~~L~~L~l 212 (390)
T 3o6n_A 203 --------------------------------I--------------------------------------PIAVEELDA 212 (390)
T ss_dssp --------------------------------C--------------------------------------CSSCSEEEC
T ss_pred --------------------------------C--------------------------------------CCcceEEEC
Confidence 0 012245666
Q ss_pred cCCcccccCCccccccCCcccEEEccCCcccccCccccCCCCCCCEEEccCCCCCCCCcccccCCCCCCEEEcCCCcCCc
Q 045553 526 GNNKLIGEVPSDMGSHCKCMKFLSMAGNEFVGLIPQSFTNFDSLRNLNLSRNHLQGPLPSYINKMEDLKFLSLSLNNFTG 605 (1082)
Q Consensus 526 ~~n~l~~~ip~~~~~~~~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 605 (1082)
++|++. .+|...+ ++|+.|++++|++++. ..+..+++|++|+|++|.+++..|..|..+++|++|+|++|++++
T Consensus 213 ~~n~l~-~~~~~~~---~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~ 286 (390)
T 3o6n_A 213 SHNSIN-VVRGPVN---VELTILKLQHNNLTDT--AWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVA 286 (390)
T ss_dssp CSSCCC-EEECCCC---SSCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCEEESGGGTTCSSCCEEECCSSCCCE
T ss_pred CCCeee-ecccccc---ccccEEECCCCCCccc--HHHcCCCCccEEECCCCcCCCcChhHccccccCCEEECCCCcCcc
Confidence 666655 3444332 5699999999999875 579999999999999999998889999999999999999999994
Q ss_pred cCchhhhcCcccchhhccCcccCCCCCccccCCcccceecccCcccCCCCCCCCCCCCcccEEeccCCccccCCCCC--c
Q 045553 606 AIPWELTQLASLEVLELSANSLSGEIPSEFSKLEHLNVLRLDHNNLTGRIPPGFGTRSSLSIFDVSFNNLSGSAPRN--S 683 (1082)
Q Consensus 606 ~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~l~ls~N~l~~~~p~~--~ 683 (1082)
+|..+..+++|++|+|++|+++ .+|..+..+++|+.|+|++|+|++. + +..+++|+.|++++|++++..... .
T Consensus 287 -~~~~~~~l~~L~~L~L~~n~l~-~~~~~~~~l~~L~~L~L~~N~i~~~-~--~~~~~~L~~L~l~~N~~~~~~~~~~~~ 361 (390)
T 3o6n_A 287 -LNLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLENLYLDHNSIVTL-K--LSTHHTLKNLTLSHNDWDCNSLRALFR 361 (390)
T ss_dssp -EECSSSCCTTCCEEECCSSCCC-CCGGGHHHHTTCSEEECCSSCCCCC-C--CCTTCCCSEEECCSSCEEHHHHHHHTT
T ss_pred -cCcccCCCCCCCEEECCCCcce-ecCccccccCcCCEEECCCCcccee-C--chhhccCCEEEcCCCCccchhHHHHHH
Confidence 6777788999999999999999 6777888999999999999999954 3 678899999999999999754432 2
Q ss_pred ccccccCCCCCCCCCC
Q 045553 684 LIKCENVQGNPNLQLC 699 (1082)
Q Consensus 684 ~~~~~~~~~Np~~c~c 699 (1082)
.+....+.+++..|.|
T Consensus 362 ~~~~~~~~~~~~~c~~ 377 (390)
T 3o6n_A 362 NVARPAVDDADQHCKI 377 (390)
T ss_dssp TCCTTTBCCCCSCCCT
T ss_pred HHHhhcccccCceecc
Confidence 2334456677777554
No 289
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=100.00 E-value=4.7e-33 Score=324.01 Aligned_cols=241 Identities=17% Similarity=0.154 Sum_probs=182.2
Q ss_pred hcCccccceecccCceEEEEEEE-cCCeEEEEEEeecCcc---ccHHHHHHHHHHHhccCC-Cceee-------------
Q 045553 800 TAGFNVQNCIGSGGFGATYKAEI-IPGVVVAVKRLSVGRF---QGVQQFAAEIRTLGRVQH-PNLVT------------- 861 (1082)
Q Consensus 800 ~~~~~~~~~lg~G~~g~Vy~a~~-~~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h-~niv~------------- 861 (1082)
...|...++||+|+||.||+|.. .+|+.||||++..... ...+.+.+|+.+++.++| +|...
T Consensus 77 ~~~~~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 156 (413)
T 3dzo_A 77 PRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDL 156 (413)
T ss_dssp CEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCEE
T ss_pred ceeEEEecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchhh
Confidence 34577889999999999999974 4689999999874332 235778999999999987 32111
Q ss_pred --------Eeeeecc-----CCeEEEEEeecCCCCHHHHHh-----hCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCe
Q 045553 862 --------LIGYHVS-----EAEMFLIYNYLPGGNLEKFIQ-----DRPRRTVEWSMLHKIALDVARALAYLHDECVPRV 923 (1082)
Q Consensus 862 --------l~~~~~~-----~~~~~lV~E~~~~gsL~~~l~-----~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~i 923 (1082)
+..++.. ...++++|+++ +++|.++++ ......+++..+..++.|+++||+|||+. +|
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~i 232 (413)
T 3dzo_A 157 VKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHY---GL 232 (413)
T ss_dssp EECCC---------------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHT---TE
T ss_pred cccCCCCccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHhC---Cc
Confidence 1111111 22467777776 789999985 22244678889999999999999999999 99
Q ss_pred EeccCCCCCEEEcCCCcEEEeecccceecCCCCCccccCcccCCCcccchhc----------ccCCCCchhhHHHHHHHH
Q 045553 924 LHRDIKPSNILLDNNLNAYLSDFGLARLLGTSETHATTDVAGTFGYVAPEYA----------MTCRVSDKADVYSFGVVL 993 (1082)
Q Consensus 924 vH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~----------~~~~~~~~~Dv~slGvll 993 (1082)
+||||||+|||++.++.+||+|||+++..... .....| +.|+|||++ .+..++.++|||||||++
T Consensus 233 iHrDiKp~NILl~~~~~~kL~DFG~a~~~~~~----~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvil 307 (413)
T 3dzo_A 233 VHTYLRPVDIVLDQRGGVFLTGFEHLVRDGAS----AVSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAI 307 (413)
T ss_dssp ECSCCCGGGEEECTTCCEEECCGGGCEETTEE----ECCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHHHH
T ss_pred ccCCcccceEEEecCCeEEEEeccceeecCCc----cccCCC-CceeCchhhhccccccccccCcCCCchhhHHHHHHHH
Confidence 99999999999999999999999999875432 344567 999999999 556688999999999999
Q ss_pred HHHHhCCCCCCCCccCCCCCccHHHHHHHHHhcCCCccccccccCCCCChHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 045553 994 LELISDKKALDPSFCSFGNGFNIVAWASMLLLQGRPCEFFTAGLWDCGPHDDLIEMLNLAIMCTGESLSSRPSMRQVAQ 1072 (1082)
Q Consensus 994 ~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~ 1072 (1082)
|||++|+.||...... +..+..+.. ....+..+.+++.+||+.||++||++.|+++
T Consensus 308 ~elltg~~Pf~~~~~~---------------------~~~~~~~~~--~~~~~~~~~~li~~~l~~dP~~Rpt~~~~l~ 363 (413)
T 3dzo_A 308 YWIWCADLPNTDDAAL---------------------GGSEWIFRS--CKNIPQPVRALLEGFLRYPKEDRLLPLQAME 363 (413)
T ss_dssp HHHHHSSCCCCTTGGG---------------------SCSGGGGSS--CCCCCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred HHHHHCCCCCCCcchh---------------------hhHHHHHhh--cccCCHHHHHHHHHHccCChhhCcCHHHHHh
Confidence 9999999999743211 011111110 0123467999999999999999999777644
No 290
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=99.98 E-value=3.5e-31 Score=301.74 Aligned_cols=218 Identities=23% Similarity=0.321 Sum_probs=143.7
Q ss_pred ccCCCCCCEEEcccCCCcccCChhhcCCCCCCEEeCcCCCCCCCCCccccCCCCCCeEEccCcccccccCccccCCCCCc
Q 045553 106 IGDLTQLRVLLLAFNGFSGELPLEIGQLSLLEILDLSFNSFHGPIPPTLQNCSSLRLINLSGNQFNGTIPAFFGQSPGFQ 185 (1082)
Q Consensus 106 l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~ 185 (1082)
+.++++|++|++++|.+. .+| .+..+++|++|+|++|.+++ ++. +.++++|++|++++|+++. + ..+..+++|+
T Consensus 40 ~~~l~~L~~L~l~~~~i~-~~~-~~~~~~~L~~L~l~~n~i~~-~~~-~~~l~~L~~L~L~~n~i~~-~-~~~~~l~~L~ 113 (347)
T 4fmz_A 40 QEELESITKLVVAGEKVA-SIQ-GIEYLTNLEYLNLNGNQITD-ISP-LSNLVKLTNLYIGTNKITD-I-SALQNLTNLR 113 (347)
T ss_dssp HHHHTTCSEEECCSSCCC-CCT-TGGGCTTCCEEECCSSCCCC-CGG-GTTCTTCCEEECCSSCCCC-C-GGGTTCTTCS
T ss_pred chhcccccEEEEeCCccc-cch-hhhhcCCccEEEccCCcccc-chh-hhcCCcCCEEEccCCcccC-c-hHHcCCCcCC
Confidence 556778888888888877 444 37778888888888888873 444 7788888888888887774 3 3577777777
Q ss_pred EEEcccCcccccCCcccccccccccEEEcccCccCCCCCccccCCCCccEEEccCCcCCCCcCccccCCCCCCEEeCCCC
Q 045553 186 VVSLSFNLLSGSVPEEFGDNCVSLEHILLAANSLTGSIPPSLGNCTELRSLLLSSNMLQGDIPSSFGQLVNLEVLDLSRN 265 (1082)
Q Consensus 186 ~L~L~~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N 265 (1082)
+|++++|++. .++. ...+++|++|++++|.....++ .+..+++|++|++++|.+.+..+ +..+++|++|++++|
T Consensus 114 ~L~l~~n~i~-~~~~--~~~l~~L~~L~l~~n~~~~~~~-~~~~l~~L~~L~l~~~~~~~~~~--~~~l~~L~~L~l~~n 187 (347)
T 4fmz_A 114 ELYLNEDNIS-DISP--LANLTKMYSLNLGANHNLSDLS-PLSNMTGLNYLTVTESKVKDVTP--IANLTDLYSLSLNYN 187 (347)
T ss_dssp EEECTTSCCC-CCGG--GTTCTTCCEEECTTCTTCCCCG-GGTTCTTCCEEECCSSCCCCCGG--GGGCTTCSEEECTTS
T ss_pred EEECcCCccc-Cchh--hccCCceeEEECCCCCCccccc-chhhCCCCcEEEecCCCcCCchh--hccCCCCCEEEccCC
Confidence 7777777776 3333 2346666666666665443333 35666666666666666653322 555666666666666
Q ss_pred cCcccCCccccCCCCCcEEEeccccCCcccccCCCCCCcccccCCCcccccCCCCCccccCCCCCcEEEcCCCcccCCCC
Q 045553 266 FLSGIVPSELGMCKQLKVLVLRNDYGPLYSREHGDLPIQPVVDGGEDYNFFDGGLPDSITRLPNLRVFWAPNLNLEGIFP 345 (1082)
Q Consensus 266 ~l~~~~p~~l~~l~~L~~L~l~~n~~~~~~~~~~~l~~~~~~~~~~~~n~~~~~~p~~l~~l~~L~~L~l~~n~l~~~~~ 345 (1082)
.+.+..+ +..+++|+.|++++|.+.+..+
T Consensus 188 ~l~~~~~---------------------------------------------------~~~l~~L~~L~l~~n~l~~~~~ 216 (347)
T 4fmz_A 188 QIEDISP---------------------------------------------------LASLTSLHYFTAYVNQITDITP 216 (347)
T ss_dssp CCCCCGG---------------------------------------------------GGGCTTCCEEECCSSCCCCCGG
T ss_pred ccccccc---------------------------------------------------ccCCCccceeecccCCCCCCch
Confidence 5553211 3444555555666666655544
Q ss_pred cccccccCCCeEEcCCccccCCCCccccCCCCCCEEecCCCcCcc
Q 045553 346 QNWELCSKLEMLNLAHNFFTGQIPASLGNCKSLYFLDLSSNNLTG 390 (1082)
Q Consensus 346 ~~l~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~ 390 (1082)
+..+++|++|++++|++++. +. +..+++|+.|++++|++++
T Consensus 217 --~~~~~~L~~L~l~~n~l~~~-~~-~~~l~~L~~L~l~~n~l~~ 257 (347)
T 4fmz_A 217 --VANMTRLNSLKIGNNKITDL-SP-LANLSQLTWLEIGTNQISD 257 (347)
T ss_dssp --GGGCTTCCEEECCSSCCCCC-GG-GTTCTTCCEEECCSSCCCC
T ss_pred --hhcCCcCCEEEccCCccCCC-cc-hhcCCCCCEEECCCCccCC
Confidence 67778888888888888843 33 7788888888888887763
No 291
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.98 E-value=4.9e-32 Score=331.42 Aligned_cols=331 Identities=21% Similarity=0.224 Sum_probs=236.0
Q ss_pred cccccEEEcccCccCCCCCccccCCCCccEEEccCCcCCCCcCccccCCCCCCEEeCCCCcCcccCCccccCCCCCcEEE
Q 045553 206 CVSLEHILLAANSLTGSIPPSLGNCTELRSLLLSSNMLQGDIPSSFGQLVNLEVLDLSRNFLSGIVPSELGMCKQLKVLV 285 (1082)
Q Consensus 206 l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~ 285 (1082)
+.+++.|++++|.++...+..+.++++|++|+|++|.+++..|..|+.+++|++|+|++|.+++..|..|+.+++|++|+
T Consensus 50 l~~l~~l~l~~~~l~~lp~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 129 (597)
T 3oja_B 50 LNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLV 129 (597)
T ss_dssp GCCCSEEEESSCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCCceEEEeeCCCCCCcCHHHHccCCCCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEE
Confidence 56788888888888865555677788888888888888877777888888888888888888877666677777777666
Q ss_pred eccccCCcccccCCCCCCcccccCCCcccccCCCCCccccCCCCCcEEEcCCCcccCCCCcccccccCCCeEEcCCcccc
Q 045553 286 LRNDYGPLYSREHGDLPIQPVVDGGEDYNFFDGGLPDSITRLPNLRVFWAPNLNLEGIFPQNWELCSKLEMLNLAHNFFT 365 (1082)
Q Consensus 286 l~~n~~~~~~~~~~~l~~~~~~~~~~~~n~~~~~~p~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~N~i~ 365 (1082)
+++| .+.++.+..|..+++|++|+|++|.++
T Consensus 130 L~~n-------------------------------------------------~l~~l~~~~~~~l~~L~~L~Ls~N~l~ 160 (597)
T 3oja_B 130 LERN-------------------------------------------------DLSSLPRGIFHNTPKLTTLSMSNNNLE 160 (597)
T ss_dssp CCSS-------------------------------------------------CCCCCCTTTTTTCTTCCEEECCSSCCC
T ss_pred eeCC-------------------------------------------------CCCCCCHHHhccCCCCCEEEeeCCcCC
Confidence 6653 333333333444444555555555554
Q ss_pred CCCCccccCCCCCCEEecCCCcCcccCCCCcccCcccEEEecCCcceecCCCCCCcccccccccccccceeeeeeccccc
Q 045553 366 GQIPASLGNCKSLYFLDLSSNNLTGLLPEEVSVPCMAVFNVSQNLLSGEIPRISHSECSKMSVNWSMSQVDLIGFYTAFF 445 (1082)
Q Consensus 366 ~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 445 (1082)
+..|..|..+++|+.|+|++|.+++.. ...++.|+.|++++|.+++..
T Consensus 161 ~~~~~~~~~l~~L~~L~L~~N~l~~~~--~~~l~~L~~L~l~~n~l~~l~------------------------------ 208 (597)
T 3oja_B 161 RIEDDTFQATTSLQNLQLSSNRLTHVD--LSLIPSLFHANVSYNLLSTLA------------------------------ 208 (597)
T ss_dssp BCCTTTTTTCTTCCEEECTTSCCSBCC--GGGCTTCSEEECCSSCCSEEE------------------------------
T ss_pred CCChhhhhcCCcCcEEECcCCCCCCcC--hhhhhhhhhhhcccCcccccc------------------------------
Confidence 444444555555555555555554432 112344444554444443100
Q ss_pred ccccccCcCCCCCCCCCceeEeeccCCcccCCCCCccccCCCccccccceeeeccCCCccccCCcccccccCCceeEEEc
Q 045553 446 YENALTSCAPFSSPSNGLFILHDFSNNLFTGPVPPFLIDSDSLSSRPYYGFWLSGNSLKGNLSTYPFDLCLSLDGLIFDI 525 (1082)
Q Consensus 446 ~~~~~~~~~~~~~~~~~~~~~~~l~~n~~~g~~p~~~~~~~~l~~~~~~~~~~~~n~~~~~l~~~p~~~~~~~~l~~l~l 525 (1082)
. ...++.|++
T Consensus 209 --------------------------------~--------------------------------------~~~L~~L~l 218 (597)
T 3oja_B 209 --------------------------------I--------------------------------------PIAVEELDA 218 (597)
T ss_dssp --------------------------------C--------------------------------------CTTCSEEEC
T ss_pred --------------------------------C--------------------------------------Cchhheeec
Confidence 0 001235556
Q ss_pred cCCcccccCCccccccCCcccEEEccCCcccccCccccCCCCCCCEEEccCCCCCCCCcccccCCCCCCEEEcCCCcCCc
Q 045553 526 GNNKLIGEVPSDMGSHCKCMKFLSMAGNEFVGLIPQSFTNFDSLRNLNLSRNHLQGPLPSYINKMEDLKFLSLSLNNFTG 605 (1082)
Q Consensus 526 ~~n~l~~~ip~~~~~~~~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 605 (1082)
++|.+. .+|...+ ++|+.|+|++|.+++. ..+..+++|++|+|++|.+++..|..|..+++|+.|+|++|++++
T Consensus 219 s~n~l~-~~~~~~~---~~L~~L~L~~n~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~ 292 (597)
T 3oja_B 219 SHNSIN-VVRGPVN---VELTILKLQHNNLTDT--AWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVA 292 (597)
T ss_dssp CSSCCC-EEECSCC---SCCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCEEESGGGTTCSSCCEEECTTSCCCE
T ss_pred cCCccc-ccccccC---CCCCEEECCCCCCCCC--hhhccCCCCCEEECCCCccCCCCHHHhcCccCCCEEECCCCCCCC
Confidence 666554 3343332 4699999999999874 689999999999999999999999999999999999999999995
Q ss_pred cCchhhhcCcccchhhccCcccCCCCCccccCCcccceecccCcccCCCCCCCCCCCCcccEEeccCCccccCCCCC--c
Q 045553 606 AIPWELTQLASLEVLELSANSLSGEIPSEFSKLEHLNVLRLDHNNLTGRIPPGFGTRSSLSIFDVSFNNLSGSAPRN--S 683 (1082)
Q Consensus 606 ~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~l~ls~N~l~~~~p~~--~ 683 (1082)
+|..+..+++|+.|+|++|.++ .+|..+..+++|+.|+|++|+|++. | +..+++|+.|++++|+|+|..... .
T Consensus 293 -l~~~~~~l~~L~~L~Ls~N~l~-~i~~~~~~l~~L~~L~L~~N~l~~~-~--~~~~~~L~~L~l~~N~~~~~~~~~~~~ 367 (597)
T 3oja_B 293 -LNLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLENLYLDHNSIVTL-K--LSTHHTLKNLTLSHNDWDCNSLRALFR 367 (597)
T ss_dssp -EECSSSCCTTCCEEECCSSCCC-CCGGGHHHHTTCSEEECCSSCCCCC-C--CCTTCCCSEEECCSSCEEHHHHHHHTT
T ss_pred -CCcccccCCCCcEEECCCCCCC-ccCcccccCCCCCEEECCCCCCCCc-C--hhhcCCCCEEEeeCCCCCChhHHHHHH
Confidence 6777888999999999999999 6888889999999999999999965 3 677899999999999999865433 2
Q ss_pred ccccccCCCCCCCCC
Q 045553 684 LIKCENVQGNPNLQL 698 (1082)
Q Consensus 684 ~~~~~~~~~Np~~c~ 698 (1082)
.+....+.+++..|.
T Consensus 368 ~~~~~~~~~~~~~C~ 382 (597)
T 3oja_B 368 NVARPAVDDADQHCK 382 (597)
T ss_dssp TCCTTTBCCCCCCCC
T ss_pred HHhhhccccccccCC
Confidence 234445667777744
No 292
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=99.98 E-value=2.7e-31 Score=300.49 Aligned_cols=131 Identities=18% Similarity=0.220 Sum_probs=102.7
Q ss_pred CcccEEEccCCcccccCccccCCCCCCCEEEccCCCCCCCCcccccCCCCCCEEEcCCCcCCccCchhhhcCcccchhhc
Q 045553 543 KCMKFLSMAGNEFVGLIPQSFTNFDSLRNLNLSRNHLQGPLPSYINKMEDLKFLSLSLNNFTGAIPWELTQLASLEVLEL 622 (1082)
Q Consensus 543 ~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 622 (1082)
++|++|++++|++++..+..|..+++|++|+|++|++++..+..|..+++|++|+|++|+++ .+|..+..+++|++|+|
T Consensus 193 ~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l 271 (332)
T 2ft3_A 193 ETLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQIRMIENGSLSFLPTLRELHLDNNKLS-RVPAGLPDLKLLQVVYL 271 (332)
T ss_dssp SSCSCCBCCSSCCCCCCTTSSTTCTTCSCCBCCSSCCCCCCTTGGGGCTTCCEEECCSSCCC-BCCTTGGGCTTCCEEEC
T ss_pred CCCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCCcCChhHhhCCCCCCEEECCCCcCe-ecChhhhcCccCCEEEC
Confidence 34777778888888777778888888888888888888777778888888888888888888 67777888888888888
Q ss_pred cCcccCCCCCccccC------CcccceecccCcccC--CCCCCCCCCCCcccEEeccCCc
Q 045553 623 SANSLSGEIPSEFSK------LEHLNVLRLDHNNLT--GRIPPGFGTRSSLSIFDVSFNN 674 (1082)
Q Consensus 623 s~N~l~~~~p~~~~~------l~~L~~L~L~~N~l~--~~~p~~~~~l~~L~~l~ls~N~ 674 (1082)
++|+|++..+..|.. ...|+.|++++|++. +..|..|..+++|+.+++++|+
T Consensus 272 ~~N~l~~~~~~~~~~~~~~~~~~~l~~L~l~~N~~~~~~~~~~~~~~l~~L~~l~l~~n~ 331 (332)
T 2ft3_A 272 HTNNITKVGVNDFCPVGFGVKRAYYNGISLFNNPVPYWEVQPATFRCVTDRLAIQFGNYK 331 (332)
T ss_dssp CSSCCCBCCTTSSSCSSCCSSSCCBSEEECCSSSSCGGGSCGGGGTTBCCSTTEEC----
T ss_pred CCCCCCccChhHccccccccccccccceEeecCcccccccCcccccccchhhhhhccccc
Confidence 888888766666654 366888888888887 6777788888888888888874
No 293
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A
Probab=99.97 E-value=7.5e-33 Score=313.88 Aligned_cols=238 Identities=16% Similarity=0.146 Sum_probs=184.0
Q ss_pred hcCccccceecccCceEEEEEEEcCCeEEEEEEeecCc--------cccHHHHHHHHHHHhccC---------CCceeeE
Q 045553 800 TAGFNVQNCIGSGGFGATYKAEIIPGVVVAVKRLSVGR--------FQGVQQFAAEIRTLGRVQ---------HPNLVTL 862 (1082)
Q Consensus 800 ~~~~~~~~~lg~G~~g~Vy~a~~~~~~~vavK~~~~~~--------~~~~~~~~~e~~~l~~l~---------h~niv~l 862 (1082)
.++|++.+.||+|+||+||+|+. +|+.||||++.... ....+.+.+|+++++.++ ||||+++
T Consensus 19 ~~~y~~~~~lG~G~~g~V~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~l 97 (336)
T 2vuw_A 19 TEKLQRCEKIGEGVFGEVFQTIA-DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIGL 97 (336)
T ss_dssp HHHHHTCEEEEEETTEEEEEEEE-TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCCE
T ss_pred cccchheeeecccCceEEEEEEe-CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhhh
Confidence 45689999999999999999987 68999999997653 233477889999998886 6666555
Q ss_pred eee-----------------ecc-------------CCeEEEEEeecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHH
Q 045553 863 IGY-----------------HVS-------------EAEMFLIYNYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARAL 912 (1082)
Q Consensus 863 ~~~-----------------~~~-------------~~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L 912 (1082)
.++ +.+ ....++||||+++|++.+.+.. ..+++..+..++.|++.||
T Consensus 98 ~~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~---~~~~~~~~~~i~~qi~~aL 174 (336)
T 2vuw_A 98 NSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRT---KLSSLATAKSILHQLTASL 174 (336)
T ss_dssp EEEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTT---TCCCHHHHHHHHHHHHHHH
T ss_pred cceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHh---cCCCHHHHHHHHHHHHHHH
Confidence 554 433 6789999999999976666643 4689999999999999999
Q ss_pred HHHh-hCCCCCeEeccCCCCCEEEcCCC--------------------cEEEeecccceecCCCCCccccCcccCCCccc
Q 045553 913 AYLH-DECVPRVLHRDIKPSNILLDNNL--------------------NAYLSDFGLARLLGTSETHATTDVAGTFGYVA 971 (1082)
Q Consensus 913 ~~LH-~~~~~~ivH~Dlk~~Nill~~~~--------------------~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~a 971 (1082)
+||| +. +|+||||||+|||++.++ .+||+|||+|+..... ...||+.|+|
T Consensus 175 ~~lH~~~---~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~~------~~~gt~~y~a 245 (336)
T 2vuw_A 175 AVAEASL---RFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDG------IVVFCDVSMD 245 (336)
T ss_dssp HHHHHHH---CCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEETT------EEECCCCTTC
T ss_pred HHHHHhC---CEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCCC------cEEEeecccC
Confidence 9999 88 999999999999999887 8999999999876432 2479999999
Q ss_pred chhcccCCCCchhhHHHHHHH-HHHHHhCCCCCCCCccCCCCCccHHHHHHH---HHh-cCCCccccccccCCCCChHHH
Q 045553 972 PEYAMTCRVSDKADVYSFGVV-LLELISDKKALDPSFCSFGNGFNIVAWASM---LLL-QGRPCEFFTAGLWDCGPHDDL 1046 (1082)
Q Consensus 972 PE~~~~~~~~~~~Dv~slGvl-l~elltg~~p~~~~~~~~~~~~~~~~~~~~---~~~-~~~~~~~~d~~l~~~~~~~~~ 1046 (1082)
||++.+.. +.++||||+|++ .+++++|..||.. ..|... ... ...... ......+...+
T Consensus 246 PE~~~g~~-~~~~Diwsl~~~~~~~~~~g~~p~~~-----------~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~s 309 (336)
T 2vuw_A 246 EDLFTGDG-DYQFDIYRLMKKENNNRWGEYHPYSN-----------VLWLHYLTDKMLKQMTFKT----KCNTPAMKQIK 309 (336)
T ss_dssp SGGGCCCS-SHHHHHHHHHHHHHTTCTTSCCTHHH-----------HHHHHHHHHHHHHTCCCSS----CCCSHHHHHHH
T ss_pred hhhhcCCC-ccceehhhhhCCCCcccccccCCCcc-----------hhhhhHHHHhhhhhhccCc----ccchhhhhhcC
Confidence 99998766 899999998776 7788889888742 122111 111 111110 00011123567
Q ss_pred HHHHHHHHHcccCCCCCCCCHHHHH
Q 045553 1047 IEMLNLAIMCTGESLSSRPSMRQVA 1071 (1082)
Q Consensus 1047 ~~l~~li~~cl~~~p~~RPt~~ev~ 1071 (1082)
.++.+++.+|++.| |+.|++
T Consensus 310 ~~~~dli~~~L~~d-----sa~e~l 329 (336)
T 2vuw_A 310 RKIQEFHRTMLNFS-----SATDLL 329 (336)
T ss_dssp HHHHHHHHHGGGSS-----SHHHHH
T ss_pred HHHHHHHHHHhccC-----CHHHHH
Confidence 88999999999976 899887
No 294
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=99.97 E-value=6e-32 Score=302.62 Aligned_cols=253 Identities=28% Similarity=0.431 Sum_probs=197.6
Q ss_pred CCCCEEEcccCCCcc--cCChhhcCCCCCCEEeCcC-CCCCCCCCccccCCCCCCeEEccCcccccccCccccCCCCCcE
Q 045553 110 TQLRVLLLAFNGFSG--ELPLEIGQLSLLEILDLSF-NSFHGPIPPTLQNCSSLRLINLSGNQFNGTIPAFFGQSPGFQV 186 (1082)
Q Consensus 110 ~~L~~L~L~~n~l~~--~~p~~~~~l~~L~~L~Ls~-n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 186 (1082)
.+++.|+|++|++++ .+|..|+++++|++|+|++ |.+.+.+|..|+++++|++|+|++|++++.+|..|..+++|++
T Consensus 50 ~~l~~L~L~~~~l~~~~~~~~~l~~l~~L~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~ 129 (313)
T 1ogq_A 50 YRVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVT 129 (313)
T ss_dssp CCEEEEEEECCCCSSCEECCGGGGGCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCE
T ss_pred ceEEEEECCCCCccCCcccChhHhCCCCCCeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCE
Confidence 578888888888888 7888888888888888884 8888888888888888888888888888888888888888888
Q ss_pred EEcccCcccccCCcccccccccccEEEcccCccCCCCCccccCCC-CccEEEccCCcCCCCcCccccCCCCCCEEeCCCC
Q 045553 187 VSLSFNLLSGSVPEEFGDNCVSLEHILLAANSLTGSIPPSLGNCT-ELRSLLLSSNMLQGDIPSSFGQLVNLEVLDLSRN 265 (1082)
Q Consensus 187 L~L~~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~-~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N 265 (1082)
|+|++|++++.+|..+. .+++|++|++++|++++.+|..++.++ +|++|++++|++++.+|..|..++ |++|++++|
T Consensus 130 L~Ls~N~l~~~~p~~~~-~l~~L~~L~L~~N~l~~~~p~~l~~l~~~L~~L~L~~N~l~~~~~~~~~~l~-L~~L~Ls~N 207 (313)
T 1ogq_A 130 LDFSYNALSGTLPPSIS-SLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLN-LAFVDLSRN 207 (313)
T ss_dssp EECCSSEEESCCCGGGG-GCTTCCEEECCSSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCC-CSEEECCSS
T ss_pred EeCCCCccCCcCChHHh-cCCCCCeEECcCCcccCcCCHHHhhhhhcCcEEECcCCeeeccCChHHhCCc-ccEEECcCC
Confidence 88888888766666654 466666666666666666666666665 666666666666655666666555 666666666
Q ss_pred cCcccCCccccCCCCCcEEEeccccCCcccccCCCCCCcccccCCCcccccCCCCCccccCCCCCcEEEcCCCcccCCCC
Q 045553 266 FLSGIVPSELGMCKQLKVLVLRNDYGPLYSREHGDLPIQPVVDGGEDYNFFDGGLPDSITRLPNLRVFWAPNLNLEGIFP 345 (1082)
Q Consensus 266 ~l~~~~p~~l~~l~~L~~L~l~~n~~~~~~~~~~~l~~~~~~~~~~~~n~~~~~~p~~l~~l~~L~~L~l~~n~l~~~~~ 345 (1082)
++++..|. .|..+++|+.|++++|.+.+..+
T Consensus 208 ~l~~~~~~-------------------------------------------------~~~~l~~L~~L~L~~N~l~~~~~ 238 (313)
T 1ogq_A 208 MLEGDASV-------------------------------------------------LFGSDKNTQKIHLAKNSLAFDLG 238 (313)
T ss_dssp EEEECCGG-------------------------------------------------GCCTTSCCSEEECCSSEECCBGG
T ss_pred cccCcCCH-------------------------------------------------HHhcCCCCCEEECCCCceeeecC
Confidence 66554444 44555566666666666766655
Q ss_pred cccccccCCCeEEcCCccccCCCCccccCCCCCCEEecCCCcCcccCCCCcccCcccEEEecCCc-ceec
Q 045553 346 QNWELCSKLEMLNLAHNFFTGQIPASLGNCKSLYFLDLSSNNLTGLLPEEVSVPCMAVFNVSQNL-LSGE 414 (1082)
Q Consensus 346 ~~l~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~l~~L~~L~l~~N~-l~~~ 414 (1082)
. +..+++|++|+|++|++++.+|..+..+++|+.|+|++|++++.+|....+++|+.+++++|+ +.|.
T Consensus 239 ~-~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ip~~~~l~~L~~l~l~~N~~lc~~ 307 (313)
T 1ogq_A 239 K-VGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQGGNLQRFDVSAYANNKCLCGS 307 (313)
T ss_dssp G-CCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEEEEECCCSTTGGGSCGGGTCSSSEEEST
T ss_pred c-ccccCCCCEEECcCCcccCcCChHHhcCcCCCEEECcCCcccccCCCCccccccChHHhcCCCCccCC
Confidence 5 788899999999999999999999999999999999999999999998889999999999998 5553
No 295
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=99.97 E-value=1.5e-30 Score=294.25 Aligned_cols=130 Identities=18% Similarity=0.211 Sum_probs=82.9
Q ss_pred cccEEEccCCcccccCccccCCCCCCCEEEccCCCCCCCCcccccCCCCCCEEEcCCCcCCccCchhhhcCcccchhhcc
Q 045553 544 CMKFLSMAGNEFVGLIPQSFTNFDSLRNLNLSRNHLQGPLPSYINKMEDLKFLSLSLNNFTGAIPWELTQLASLEVLELS 623 (1082)
Q Consensus 544 ~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls 623 (1082)
+|++|++++|++++..+..|..+++|++|+|++|.+++..+..|..+++|++|+|++|+++ .+|..+..+++|++|+|+
T Consensus 193 ~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l~ 271 (330)
T 1xku_A 193 SLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLV-KVPGGLADHKYIQVVYLH 271 (330)
T ss_dssp TCSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSCCS-SCCTTTTTCSSCCEEECC
T ss_pred cCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCceeChhhccCCCCCCEEECCCCcCc-cCChhhccCCCcCEEECC
Confidence 3566666666666666666666666666666666666655556666666666666666666 556666666666666666
Q ss_pred CcccCCCCCccccC------CcccceecccCcccCC--CCCCCCCCCCcccEEeccCCc
Q 045553 624 ANSLSGEIPSEFSK------LEHLNVLRLDHNNLTG--RIPPGFGTRSSLSIFDVSFNN 674 (1082)
Q Consensus 624 ~N~l~~~~p~~~~~------l~~L~~L~L~~N~l~~--~~p~~~~~l~~L~~l~ls~N~ 674 (1082)
+|+|++..+..|.. ...|+.|+|++|++.. ..|..|..+.+++.+++++|+
T Consensus 272 ~N~i~~~~~~~f~~~~~~~~~~~l~~l~l~~N~~~~~~i~~~~f~~~~~l~~l~L~~N~ 330 (330)
T 1xku_A 272 NNNISAIGSNDFCPPGYNTKKASYSGVSLFSNPVQYWEIQPSTFRCVYVRAAVQLGNYK 330 (330)
T ss_dssp SSCCCCCCTTSSSCSSCCTTSCCCSEEECCSSSSCGGGSCGGGGTTCCCGGGEEC----
T ss_pred CCcCCccChhhcCCcccccccccccceEeecCcccccccCccccccccceeEEEecccC
Confidence 66666555555532 3567777777777752 455667777777777777774
No 296
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=99.97 E-value=1.8e-30 Score=293.64 Aligned_cols=244 Identities=23% Similarity=0.281 Sum_probs=178.1
Q ss_pred CCCCEEEcccCCCcccCChhhcCCCCCCEEeCcCCCCCCCCCccccCCCCCCeEEccCcccccccCccccCCCCCcEEEc
Q 045553 110 TQLRVLLLAFNGFSGELPLEIGQLSLLEILDLSFNSFHGPIPPTLQNCSSLRLINLSGNQFNGTIPAFFGQSPGFQVVSL 189 (1082)
Q Consensus 110 ~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 189 (1082)
.+|+.++++++.++ .+|..+. ++|++|+|++|.+++..|..|.++++|++|+|++|++++..|..|+.+++|++|+|
T Consensus 33 c~l~~l~~~~~~l~-~ip~~~~--~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 109 (332)
T 2ft3_A 33 CHLRVVQCSDLGLK-AVPKEIS--PDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYI 109 (332)
T ss_dssp EETTEEECCSSCCS-SCCSCCC--TTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEEC
T ss_pred ccCCEEECCCCCcc-ccCCCCC--CCCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEEC
Confidence 36899999999998 7787664 78999999999999777888999999999999999999888999999999999999
Q ss_pred ccCcccccCCcccccccccccEEEcccCccCCCCCccccCCCCccEEEccCCcCC--CCcCccccCCCCCCEEeCCCCcC
Q 045553 190 SFNLLSGSVPEEFGDNCVSLEHILLAANSLTGSIPPSLGNCTELRSLLLSSNMLQ--GDIPSSFGQLVNLEVLDLSRNFL 267 (1082)
Q Consensus 190 ~~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~--~~~p~~~~~l~~L~~L~Ls~N~l 267 (1082)
++|+++ .+|..++ ++|++|++++|++++..+..+.++++|++|++++|.++ +..+..|..+ +|++|++++|++
T Consensus 110 ~~n~l~-~l~~~~~---~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l-~L~~L~l~~n~l 184 (332)
T 2ft3_A 110 SKNHLV-EIPPNLP---SSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGL-KLNYLRISEAKL 184 (332)
T ss_dssp CSSCCC-SCCSSCC---TTCCEEECCSSCCCCCCSGGGSSCSSCCEEECCSCCCBGGGSCTTSSCSC-CCSCCBCCSSBC
T ss_pred CCCcCC-ccCcccc---ccCCEEECCCCccCccCHhHhCCCccCCEEECCCCccccCCCCcccccCC-ccCEEECcCCCC
Confidence 999998 7887765 68999999999998666667888899999999999886 3667778777 888888888888
Q ss_pred cccCCccccCCCCCcEEEeccccCCcccccCCCCCCcccccCCCcccccCCCCCccccCCCCCcEEEcCCCcccCCCCcc
Q 045553 268 SGIVPSELGMCKQLKVLVLRNDYGPLYSREHGDLPIQPVVDGGEDYNFFDGGLPDSITRLPNLRVFWAPNLNLEGIFPQN 347 (1082)
Q Consensus 268 ~~~~p~~l~~l~~L~~L~l~~n~~~~~~~~~~~l~~~~~~~~~~~~n~~~~~~p~~l~~l~~L~~L~l~~n~l~~~~~~~ 347 (1082)
++ +|..+. ++|++|++++| .+.+..|..+..+++|++|++++|.+.+..+..
T Consensus 185 ~~-l~~~~~--~~L~~L~l~~n-------------------------~i~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~ 236 (332)
T 2ft3_A 185 TG-IPKDLP--ETLNELHLDHN-------------------------KIQAIELEDLLRYSKLYRLGLGHNQIRMIENGS 236 (332)
T ss_dssp SS-CCSSSC--SSCSCCBCCSS-------------------------CCCCCCTTSSTTCTTCSCCBCCSSCCCCCCTTG
T ss_pred Cc-cCcccc--CCCCEEECCCC-------------------------cCCccCHHHhcCCCCCCEEECCCCcCCcCChhH
Confidence 74 454432 45565555543 233333444555555555555555555555555
Q ss_pred cccccCCCeEEcCCccccCCCCccccCCCCCCEEecCCCcCcc
Q 045553 348 WELCSKLEMLNLAHNFFTGQIPASLGNCKSLYFLDLSSNNLTG 390 (1082)
Q Consensus 348 l~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~ 390 (1082)
+..+++|++|+|++|+++ .+|..+..+++|+.|+|++|+|++
T Consensus 237 ~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l~~N~l~~ 278 (332)
T 2ft3_A 237 LSFLPTLRELHLDNNKLS-RVPAGLPDLKLLQVVYLHTNNITK 278 (332)
T ss_dssp GGGCTTCCEEECCSSCCC-BCCTTGGGCTTCCEEECCSSCCCB
T ss_pred hhCCCCCCEEECCCCcCe-ecChhhhcCccCCEEECCCCCCCc
Confidence 555555555555555555 445555555555555555555543
No 297
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=99.97 E-value=4.8e-30 Score=290.02 Aligned_cols=245 Identities=20% Similarity=0.252 Sum_probs=176.5
Q ss_pred CCCCEEEcccCCCcccCChhhcCCCCCCEEeCcCCCCCCCCCccccCCCCCCeEEccCcccccccCccccCCCCCcEEEc
Q 045553 110 TQLRVLLLAFNGFSGELPLEIGQLSLLEILDLSFNSFHGPIPPTLQNCSSLRLINLSGNQFNGTIPAFFGQSPGFQVVSL 189 (1082)
Q Consensus 110 ~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 189 (1082)
.+|+.++++++.++ .+|..+. ++|++|+|++|.+++..+..|.++++|++|+|++|++++..|..|..+++|++|+|
T Consensus 31 c~l~~l~~~~~~l~-~lp~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 107 (330)
T 1xku_A 31 CHLRVVQCSDLGLE-KVPKDLP--PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYL 107 (330)
T ss_dssp EETTEEECTTSCCC-SCCCSCC--TTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEEC
T ss_pred CCCeEEEecCCCcc-ccCccCC--CCCeEEECCCCcCCEeChhhhccCCCCCEEECCCCcCCeeCHHHhcCCCCCCEEEC
Confidence 36889999999988 6776654 68999999999999777778999999999999999999888999999999999999
Q ss_pred ccCcccccCCcccccccccccEEEcccCccCCCCCccccCCCCccEEEccCCcCCC--CcCccccCCCCCCEEeCCCCcC
Q 045553 190 SFNLLSGSVPEEFGDNCVSLEHILLAANSLTGSIPPSLGNCTELRSLLLSSNMLQG--DIPSSFGQLVNLEVLDLSRNFL 267 (1082)
Q Consensus 190 ~~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~--~~p~~~~~l~~L~~L~Ls~N~l 267 (1082)
++|+++ .+|..++ ++|++|++++|++++..+..+.++++|++|++++|.++. ..+..|..+++|++|++++|.+
T Consensus 108 s~n~l~-~l~~~~~---~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l 183 (330)
T 1xku_A 108 SKNQLK-ELPEKMP---KTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNI 183 (330)
T ss_dssp CSSCCS-BCCSSCC---TTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCC
T ss_pred CCCcCC-ccChhhc---ccccEEECCCCcccccCHhHhcCCccccEEECCCCcCCccCcChhhccCCCCcCEEECCCCcc
Confidence 999998 7777664 578888888888887777778888888888888888853 5667788888888888888888
Q ss_pred cccCCccccCCCCCcEEEeccccCCcccccCCCCCCcccccCCCcccccCCCCCccccCCCCCcEEEcCCCcccCCCCcc
Q 045553 268 SGIVPSELGMCKQLKVLVLRNDYGPLYSREHGDLPIQPVVDGGEDYNFFDGGLPDSITRLPNLRVFWAPNLNLEGIFPQN 347 (1082)
Q Consensus 268 ~~~~p~~l~~l~~L~~L~l~~n~~~~~~~~~~~l~~~~~~~~~~~~n~~~~~~p~~l~~l~~L~~L~l~~n~l~~~~~~~ 347 (1082)
+. +|..+. ++|++|++++| .+.+..|..|..+++|++|++++|.+.+..+..
T Consensus 184 ~~-l~~~~~--~~L~~L~l~~n-------------------------~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~ 235 (330)
T 1xku_A 184 TT-IPQGLP--PSLTELHLDGN-------------------------KITKVDAASLKGLNNLAKLGLSFNSISAVDNGS 235 (330)
T ss_dssp CS-CCSSCC--TTCSEEECTTS-------------------------CCCEECTGGGTTCTTCCEEECCSSCCCEECTTT
T ss_pred cc-CCcccc--ccCCEEECCCC-------------------------cCCccCHHHhcCCCCCCEEECCCCcCceeChhh
Confidence 73 444332 55666666553 233333445555555555555555555555555
Q ss_pred cccccCCCeEEcCCccccCCCCccccCCCCCCEEecCCCcCcc
Q 045553 348 WELCSKLEMLNLAHNFFTGQIPASLGNCKSLYFLDLSSNNLTG 390 (1082)
Q Consensus 348 l~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~ 390 (1082)
+..+++|++|+|++|+++ .+|..+..+++|++|+|++|+|++
T Consensus 236 ~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l~~N~i~~ 277 (330)
T 1xku_A 236 LANTPHLRELHLNNNKLV-KVPGGLADHKYIQVVYLHNNNISA 277 (330)
T ss_dssp GGGSTTCCEEECCSSCCS-SCCTTTTTCSSCCEEECCSSCCCC
T ss_pred ccCCCCCCEEECCCCcCc-cCChhhccCCCcCEEECCCCcCCc
Confidence 555555555555555555 455555555555555555555553
No 298
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.97 E-value=7.7e-34 Score=337.13 Aligned_cols=86 Identities=21% Similarity=0.194 Sum_probs=51.0
Q ss_pred cccEEEccCCccccc----CccccCCCCCCCEEEccCCCCCCCCcccccC-----CCCCCEEEcCCCcCCc----cCchh
Q 045553 544 CMKFLSMAGNEFVGL----IPQSFTNFDSLRNLNLSRNHLQGPLPSYINK-----MEDLKFLSLSLNNFTG----AIPWE 610 (1082)
Q Consensus 544 ~L~~L~L~~N~i~~~----~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~-----l~~L~~L~Ls~N~l~~----~~p~~ 610 (1082)
+|++|++++|.+++. ++..+..+++|++|+|++|.+++..+..+.. .++|++|+|++|++++ .+|..
T Consensus 314 ~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~i~~~~~~~l~~~ 393 (461)
T 1z7x_W 314 QLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADCDVSDSSCSSLAAT 393 (461)
T ss_dssp CCCEEECTTSCCBGGGHHHHHHHHHHCSSCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHH
T ss_pred cceeeEcCCCCCchHHHHHHHHHHhhCCCccEEEccCCccccccHHHHHHHHcCCCCceEEEECCCCCCChhhHHHHHHH
Confidence 466666666666543 3444555666666666666665433333322 4566666666666664 55666
Q ss_pred hhcCcccchhhccCcccCC
Q 045553 611 LTQLASLEVLELSANSLSG 629 (1082)
Q Consensus 611 ~~~l~~L~~L~Ls~N~l~~ 629 (1082)
+..+++|++|+|++|+|++
T Consensus 394 l~~~~~L~~L~l~~N~i~~ 412 (461)
T 1z7x_W 394 LLANHSLRELDLSNNCLGD 412 (461)
T ss_dssp HHHCCCCCEEECCSSSCCH
T ss_pred HHhCCCccEEECCCCCCCH
Confidence 6666666666666666653
No 299
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.96 E-value=2.1e-32 Score=324.71 Aligned_cols=159 Identities=18% Similarity=0.158 Sum_probs=83.7
Q ss_pred CCCCEEEcccCCCcccCChh-hcCCCCCCEEeCcCCCCCC----CCCccccCCCCCCeEEccCcccccccCccc-cCCC-
Q 045553 110 TQLRVLLLAFNGFSGELPLE-IGQLSLLEILDLSFNSFHG----PIPPTLQNCSSLRLINLSGNQFNGTIPAFF-GQSP- 182 (1082)
Q Consensus 110 ~~L~~L~L~~n~l~~~~p~~-~~~l~~L~~L~Ls~n~l~~----~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~-~~l~- 182 (1082)
++|++|+|++|+++...... +..+++|++|+|++|.++. .++..+..+++|++|+|++|++.+..+..+ ..++
T Consensus 3 ~~l~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~ 82 (461)
T 1z7x_W 3 LDIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGLQT 82 (461)
T ss_dssp EEEEEEEEESCCCCHHHHHHHHHHHTTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHHHHHHHTTCS
T ss_pred ccceehhhhhcccCchhHHHHHhhcCCccEEEccCCCCCHHHHHHHHHHHHhCCCcCEEeCCCCcCChHHHHHHHHHHhh
Confidence 35666777777666433222 5666677777777776663 235556666667777777766664433322 2233
Q ss_pred ---CCcEEEcccCcccc----cCCcccccccccccEEEcccCccCCCCCcccc-----CCCCccEEEccCCcCCCC----
Q 045553 183 ---GFQVVSLSFNLLSG----SVPEEFGDNCVSLEHILLAANSLTGSIPPSLG-----NCTELRSLLLSSNMLQGD---- 246 (1082)
Q Consensus 183 ---~L~~L~L~~N~l~~----~~p~~~~~~l~~L~~L~L~~N~l~~~~~~~~~-----~l~~L~~L~L~~N~l~~~---- 246 (1082)
+|++|+|++|+++. .++..+. .+++|++|++++|.+++..+..+. ..++|++|++++|++++.
T Consensus 83 ~~~~L~~L~L~~n~i~~~~~~~l~~~l~-~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~ 161 (461)
T 1z7x_W 83 PSCKIQKLSLQNCCLTGAGCGVLSSTLR-TLPTLQELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCEP 161 (461)
T ss_dssp TTCCCCEEECTTSCCBGGGHHHHHHHTT-SCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHH
T ss_pred CCCceeEEEccCCCCCHHHHHHHHHHHc-cCCceeEEECCCCcCchHHHHHHHHHHhcCCCcceEEECCCCCCCHHHHHH
Confidence 46666666666552 2233332 345555555555555433222221 133455555555555532
Q ss_pred cCccccCCCCCCEEeCCCCcCcc
Q 045553 247 IPSSFGQLVNLEVLDLSRNFLSG 269 (1082)
Q Consensus 247 ~p~~~~~l~~L~~L~Ls~N~l~~ 269 (1082)
++..+..+++|++|++++|.+++
T Consensus 162 l~~~l~~~~~L~~L~L~~n~i~~ 184 (461)
T 1z7x_W 162 LASVLRAKPDFKELTVSNNDINE 184 (461)
T ss_dssp HHHHHHHCTTCCEEECCSSBCHH
T ss_pred HHHHHhhCCCCCEEECcCCCcch
Confidence 23344445555555555555543
No 300
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.96 E-value=2.4e-29 Score=286.99 Aligned_cols=182 Identities=17% Similarity=0.133 Sum_probs=154.1
Q ss_pred CCCCEEEcccCCCcccCChhhcCCCCCCEEeCcCCCCCCCCCccccCCCCCCeEEccCcccccccCccccCCCCCcEEEc
Q 045553 110 TQLRVLLLAFNGFSGELPLEIGQLSLLEILDLSFNSFHGPIPPTLQNCSSLRLINLSGNQFNGTIPAFFGQSPGFQVVSL 189 (1082)
Q Consensus 110 ~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 189 (1082)
++|++|+|++|++++..+..|..+++|++|+|++|.+++..|..|.++++|++|+|++|++++..+..|..+++|++|+|
T Consensus 52 ~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L 131 (353)
T 2z80_A 52 EAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLEHLDLSYNYLSNLSSSWFKPLSSLTFLNL 131 (353)
T ss_dssp TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSSCCHHHHTTCTTCSEEEC
T ss_pred ccCcEEECCCCcCcccCHHHhccCCCCCEEECCCCccCccCHhhcCCCCCCCEEECCCCcCCcCCHhHhCCCccCCEEEC
Confidence 48999999999999766668999999999999999999877888999999999999999999666666899999999999
Q ss_pred ccCcccccCCc-ccccccccccEEEcccC-ccCCCCCccccCCCCccEEEccCCcCCCCcCccccCCCCCCEEeCCCCcC
Q 045553 190 SFNLLSGSVPE-EFGDNCVSLEHILLAAN-SLTGSIPPSLGNCTELRSLLLSSNMLQGDIPSSFGQLVNLEVLDLSRNFL 267 (1082)
Q Consensus 190 ~~N~l~~~~p~-~~~~~l~~L~~L~L~~N-~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l 267 (1082)
++|+++ .+|. ..+..+++|++|++++| .+++..+..+.++++|++|++++|++++..|..|..+++|++|++++|++
T Consensus 132 ~~n~l~-~l~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l 210 (353)
T 2z80_A 132 LGNPYK-TLGETSLFSHLTKLQILRVGNMDTFTKIQRKDFAGLTFLEELEIDASDLQSYEPKSLKSIQNVSHLILHMKQH 210 (353)
T ss_dssp TTCCCS-SSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSCS
T ss_pred CCCCCc-ccCchhhhccCCCCcEEECCCCccccccCHHHccCCCCCCEEECCCCCcCccCHHHHhccccCCeecCCCCcc
Confidence 999998 6666 55557899999999998 47766677888999999999999999988888999999999999999998
Q ss_pred cccCCccccCCCCCcEEEeccccCC
Q 045553 268 SGIVPSELGMCKQLKVLVLRNDYGP 292 (1082)
Q Consensus 268 ~~~~p~~l~~l~~L~~L~l~~n~~~ 292 (1082)
+...+..+..+++|+.|++++|.+.
T Consensus 211 ~~~~~~~~~~~~~L~~L~L~~n~l~ 235 (353)
T 2z80_A 211 ILLLEIFVDVTSSVECLELRDTDLD 235 (353)
T ss_dssp TTHHHHHHHHTTTEEEEEEESCBCT
T ss_pred ccchhhhhhhcccccEEECCCCccc
Confidence 7544444556888888888886543
No 301
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.95 E-value=2.1e-28 Score=273.37 Aligned_cols=232 Identities=20% Similarity=0.187 Sum_probs=165.4
Q ss_pred CCCCEEEcccCCCcccCChhhcCCCCCCEEeCcCCCCCCC--CCccccCCCCCCeEEccCcccccccCccccCCCCCcEE
Q 045553 110 TQLRVLLLAFNGFSGELPLEIGQLSLLEILDLSFNSFHGP--IPPTLQNCSSLRLINLSGNQFNGTIPAFFGQSPGFQVV 187 (1082)
Q Consensus 110 ~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~--~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 187 (1082)
++|++|+|++|+++...+..|+++++|++|+|++|.++.. .|..+.++++|++|+|++|.+. .+|..+..+++|++|
T Consensus 28 ~~l~~L~L~~n~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~-~l~~~~~~l~~L~~L 106 (306)
T 2z66_A 28 SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDFGTTSLKYLDLSFNGVI-TMSSNFLGLEQLEHL 106 (306)
T ss_dssp TTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCEEEEEEHHHHSCSCCCEEECCSCSEE-EEEEEEETCTTCCEE
T ss_pred CCCCEEECCCCccCccCHhHhhccccCCEEECCCCccCcccCcccccccccccCEEECCCCccc-cChhhcCCCCCCCEE
Confidence 5789999999999844445588999999999999998832 3677788999999999999988 567778888999999
Q ss_pred EcccCcccccCCcccccccccccEEEcccCccCCCCCccccCCCCccEEEccCCcCCC-CcCccccCCCCCCEEeCCCCc
Q 045553 188 SLSFNLLSGSVPEEFGDNCVSLEHILLAANSLTGSIPPSLGNCTELRSLLLSSNMLQG-DIPSSFGQLVNLEVLDLSRNF 266 (1082)
Q Consensus 188 ~L~~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~-~~p~~~~~l~~L~~L~Ls~N~ 266 (1082)
++++|++++..+...+..+++|++|++++|.+++..+..+.++++|++|++++|.+++ ..|..|..+++|++|++++|+
T Consensus 107 ~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~ 186 (306)
T 2z66_A 107 DFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQ 186 (306)
T ss_dssp ECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSC
T ss_pred ECCCCcccccccchhhhhccCCCEEECCCCcCCccchhhcccCcCCCEEECCCCccccccchhHHhhCcCCCEEECCCCC
Confidence 9999988843332334457777777777777776666667777777777777777765 466677777777777777777
Q ss_pred CcccCCccccCCCCCcEEEeccccCCcccccCCCCCCcccccCCCcccccCCCCCccccCCCCCcEEEcCCCcccCCCCc
Q 045553 267 LSGIVPSELGMCKQLKVLVLRNDYGPLYSREHGDLPIQPVVDGGEDYNFFDGGLPDSITRLPNLRVFWAPNLNLEGIFPQ 346 (1082)
Q Consensus 267 l~~~~p~~l~~l~~L~~L~l~~n~~~~~~~~~~~l~~~~~~~~~~~~n~~~~~~p~~l~~l~~L~~L~l~~n~l~~~~~~ 346 (1082)
+++..|..+..+++|++|+++ +|.+.+..+.
T Consensus 187 l~~~~~~~~~~l~~L~~L~L~-------------------------------------------------~N~l~~~~~~ 217 (306)
T 2z66_A 187 LEQLSPTAFNSLSSLQVLNMS-------------------------------------------------HNNFFSLDTF 217 (306)
T ss_dssp CCEECTTTTTTCTTCCEEECT-------------------------------------------------TSCCSBCCSG
T ss_pred cCCcCHHHhcCCCCCCEEECC-------------------------------------------------CCccCccChh
Confidence 766555555555555555554 4445454445
Q ss_pred ccccccCCCeEEcCCccccCCCCccccCCC-CCCEEecCCCcCccc
Q 045553 347 NWELCSKLEMLNLAHNFFTGQIPASLGNCK-SLYFLDLSSNNLTGL 391 (1082)
Q Consensus 347 ~l~~l~~L~~L~Ls~N~i~~~~p~~~~~l~-~L~~L~Ls~N~l~~~ 391 (1082)
.+..+++|++|+|++|++++..|..+..++ +|++|+|++|++++.
T Consensus 218 ~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~L~L~~N~~~~~ 263 (306)
T 2z66_A 218 PYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACT 263 (306)
T ss_dssp GGTTCTTCCEEECTTSCCCBCSSSSCCCCCTTCCEEECTTCCEECS
T ss_pred hccCcccCCEeECCCCCCcccCHHHHHhhhccCCEEEccCCCeecc
Confidence 555666666666666666666666666663 666677776666654
No 302
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=99.95 E-value=3.8e-30 Score=315.61 Aligned_cols=433 Identities=12% Similarity=0.061 Sum_probs=240.7
Q ss_pred cccccccCCCCCCEEEcccCCC---cccCChhhc------------CCCCCCEEeCcCCCCCCCCCccccCC--CCCCeE
Q 045553 101 NLSRAIGDLTQLRVLLLAFNGF---SGELPLEIG------------QLSLLEILDLSFNSFHGPIPPTLQNC--SSLRLI 163 (1082)
Q Consensus 101 ~l~~~l~~l~~L~~L~L~~n~l---~~~~p~~~~------------~l~~L~~L~Ls~n~l~~~~p~~l~~l--~~L~~L 163 (1082)
..+..+..+++|++|+|+++.. .+.+|..++ .+++|++|+|++|.+++..+..+... ++|++|
T Consensus 64 ~~~~~~~~~~~L~~L~L~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~L~~L 143 (592)
T 3ogk_B 64 TPDRLSRRFPNLRSLKLKGKPRAAMFNLIPENWGGYVTPWVTEISNNLRQLKSVHFRRMIVSDLDLDRLAKARADDLETL 143 (592)
T ss_dssp CHHHHHHHCTTCSEEEEECSCGGGGGTCSCTTSCCBCHHHHHHHHHHCTTCCEEEEESCBCCHHHHHHHHHHHGGGCCEE
T ss_pred ChHHHHHhCCCCeEEEecCCcchhhcccccccccccchHHHHHHHhhCCCCCeEEeeccEecHHHHHHHHHhccccCcEE
Confidence 3445567788888888877532 123333322 45556666666665554444444442 235666
Q ss_pred EccCcc-ccc-ccCccccCCCCCcEEEcccCcccccCCcccccccccccEEEcccCccCCCCCccccCCCCccEEEccCC
Q 045553 164 NLSGNQ-FNG-TIPAFFGQSPGFQVVSLSFNLLSGSVPEEFGDNCVSLEHILLAANSLTGSIPPSLGNCTELRSLLLSSN 241 (1082)
Q Consensus 164 ~Ls~N~-l~~-~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N 241 (1082)
+|++|. +.. .++.....+++|++|+|++|.+++.-... ++..+..+++|++|++++|
T Consensus 144 ~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~~~~~~---------------------l~~~~~~~~~L~~L~L~~n 202 (592)
T 3ogk_B 144 KLDKCSGFTTDGLLSIVTHCRKIKTLLMEESSFSEKDGKW---------------------LHELAQHNTSLEVLNFYMT 202 (592)
T ss_dssp EEESCEEEEHHHHHHHHHHCTTCSEEECTTCEEECCCSHH---------------------HHHHHHHCCCCCEEECTTC
T ss_pred ECcCCCCcCHHHHHHHHhhCCCCCEEECccccccCcchhH---------------------HHHHHhcCCCccEEEeecc
Confidence 665554 110 11122234455555555555444221110 1122334455566666666
Q ss_pred cCCC----CcCccccCCCCCCEEeCCCCcCcccCCccccCCCCCcEEEeccccCCcccccCCCCCCcccccCCCcccccC
Q 045553 242 MLQG----DIPSSFGQLVNLEVLDLSRNFLSGIVPSELGMCKQLKVLVLRNDYGPLYSREHGDLPIQPVVDGGEDYNFFD 317 (1082)
Q Consensus 242 ~l~~----~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~n~~~~~~~~~~~l~~~~~~~~~~~~n~~~ 317 (1082)
.+++ .++..+..+++|++|++++|.+.+ +|..+..+++|+.|+++..... .-.
T Consensus 203 ~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~-l~~~~~~~~~L~~L~l~~~~~~----------------------~~~ 259 (592)
T 3ogk_B 203 EFAKISPKDLETIARNCRSLVSVKVGDFEILE-LVGFFKAAANLEEFCGGSLNED----------------------IGM 259 (592)
T ss_dssp CCSSCCHHHHHHHHHHCTTCCEEECSSCBGGG-GHHHHHHCTTCCEEEECBCCCC----------------------TTC
T ss_pred CCCccCHHHHHHHHhhCCCCcEEeccCccHHH-HHHHHhhhhHHHhhcccccccc----------------------cch
Confidence 5541 233344455666666666666653 4556666666666666531100 001
Q ss_pred CCCCccccCCCCCcEEEcCCCcccCCCCcccccccCCCeEEcCCccccCCCC-ccccCCCCCCEEecCCCcCccc-CCCC
Q 045553 318 GGLPDSITRLPNLRVFWAPNLNLEGIFPQNWELCSKLEMLNLAHNFFTGQIP-ASLGNCKSLYFLDLSSNNLTGL-LPEE 395 (1082)
Q Consensus 318 ~~~p~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~N~i~~~~p-~~~~~l~~L~~L~Ls~N~l~~~-~p~~ 395 (1082)
+..+..+..+++|+.|.++++. ....|..+..+++|++|+|++|.+++... ..+..+++|+.|+|+ |.+... ++..
T Consensus 260 ~~~~~~l~~~~~L~~L~l~~~~-~~~l~~~~~~~~~L~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~-~~~~~~~l~~~ 337 (592)
T 3ogk_B 260 PEKYMNLVFPRKLCRLGLSYMG-PNEMPILFPFAAQIRKLDLLYALLETEDHCTLIQKCPNLEVLETR-NVIGDRGLEVL 337 (592)
T ss_dssp TTSSSCCCCCTTCCEEEETTCC-TTTGGGGGGGGGGCCEEEETTCCCCHHHHHHHHTTCTTCCEEEEE-GGGHHHHHHHH
T ss_pred HHHHHHhhccccccccCccccc-hhHHHHHHhhcCCCcEEecCCCcCCHHHHHHHHHhCcCCCEEecc-CccCHHHHHHH
Confidence 1233455566677777776642 33345566677777777777777654333 335667777777777 444332 2222
Q ss_pred c-ccCcccEEEecC-----------CcceecCCCCCCcccccccccccccceeeeeecccccccccccCcCCCCCCCCCc
Q 045553 396 V-SVPCMAVFNVSQ-----------NLLSGEIPRISHSECSKMSVNWSMSQVDLIGFYTAFFYENALTSCAPFSSPSNGL 463 (1082)
Q Consensus 396 ~-~l~~L~~L~l~~-----------N~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 463 (1082)
. .+++|+.|++++ |.+++.
T Consensus 338 ~~~~~~L~~L~L~~g~~~~~~~~~~~~~~~~------------------------------------------------- 368 (592)
T 3ogk_B 338 AQYCKQLKRLRIERGADEQGMEDEEGLVSQR------------------------------------------------- 368 (592)
T ss_dssp HHHCTTCCEEEEECCCCSSTTSSTTCCCCHH-------------------------------------------------
T ss_pred HHhCCCCCEEEeecCccccccccccCccCHH-------------------------------------------------
Confidence 1 356677777762 121100
Q ss_pred eeEeeccCCcccCCCCCccccCCCccccccceeeeccCCCccccCCcccccccCCceeEEEccCCcccccCCccccccCC
Q 045553 464 FILHDFSNNLFTGPVPPFLIDSDSLSSRPYYGFWLSGNSLKGNLSTYPFDLCLSLDGLIFDIGNNKLIGEVPSDMGSHCK 543 (1082)
Q Consensus 464 ~~~~~l~~n~~~g~~p~~~~~~~~l~~~~~~~~~~~~n~~~~~l~~~p~~~~~~~~l~~l~l~~n~l~~~ip~~~~~~~~ 543 (1082)
.++.....+.+|++|+++.|++.+..+..+...++
T Consensus 369 ---------------------------------------------~~~~l~~~~~~L~~L~l~~~~l~~~~~~~l~~~~~ 403 (592)
T 3ogk_B 369 ---------------------------------------------GLIALAQGCQELEYMAVYVSDITNESLESIGTYLK 403 (592)
T ss_dssp ---------------------------------------------HHHHHHHHCTTCSEEEEEESCCCHHHHHHHHHHCC
T ss_pred ---------------------------------------------HHHHHHhhCccCeEEEeecCCccHHHHHHHHhhCC
Confidence 00000111344567777777776666666666667
Q ss_pred cccEEEcc----CCccccc-----CccccCCCCCCCEEEccCCC--CCCCCccccc-CCCCCCEEEcCCCcCCc-cCchh
Q 045553 544 CMKFLSMA----GNEFVGL-----IPQSFTNFDSLRNLNLSRNH--LQGPLPSYIN-KMEDLKFLSLSLNNFTG-AIPWE 610 (1082)
Q Consensus 544 ~L~~L~L~----~N~i~~~-----~~~~~~~l~~L~~L~L~~N~--l~~~~p~~~~-~l~~L~~L~Ls~N~l~~-~~p~~ 610 (1082)
+|+.|+++ .|++++. ++..+.++++|+.|+|++|. +++..+..+. .+++|++|+|++|++++ .++..
T Consensus 404 ~L~~L~l~~~~~~n~l~~~p~~~~~~~~~~~~~~L~~L~L~~~~~~l~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~ 483 (592)
T 3ogk_B 404 NLCDFRLVLLDREERITDLPLDNGVRSLLIGCKKLRRFAFYLRQGGLTDLGLSYIGQYSPNVRWMLLGYVGESDEGLMEF 483 (592)
T ss_dssp SCCEEEEEECSCCSCCSSCCCHHHHHHHHHHCTTCCEEEEECCGGGCCHHHHHHHHHSCTTCCEEEECSCCSSHHHHHHH
T ss_pred CCcEEEEeecCCCccccCchHHHHHHHHHHhCCCCCEEEEecCCCCccHHHHHHHHHhCccceEeeccCCCCCHHHHHHH
Confidence 78888885 5667653 33346667888888887533 5544444443 37788888888888875 34555
Q ss_pred hhcCcccchhhccCcccCCC-CCccccCCcccceecccCcccCCCCCCCC-CCCCcccEEeccCC
Q 045553 611 LTQLASLEVLELSANSLSGE-IPSEFSKLEHLNVLRLDHNNLTGRIPPGF-GTRSSLSIFDVSFN 673 (1082)
Q Consensus 611 ~~~l~~L~~L~Ls~N~l~~~-~p~~~~~l~~L~~L~L~~N~l~~~~p~~~-~~l~~L~~l~ls~N 673 (1082)
+.++++|++|+|++|.+++. ++..+..+++|++|+|++|++++.-...+ ..++.+....+..+
T Consensus 484 ~~~~~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~ls~n~it~~~~~~l~~~~p~l~~~~~~~~ 548 (592)
T 3ogk_B 484 SRGCPNLQKLEMRGCCFSERAIAAAVTKLPSLRYLWVQGYRASMTGQDLMQMARPYWNIELIPSR 548 (592)
T ss_dssp HTCCTTCCEEEEESCCCBHHHHHHHHHHCSSCCEEEEESCBCCTTCTTGGGGCCTTEEEEEECCC
T ss_pred HhcCcccCeeeccCCCCcHHHHHHHHHhcCccCeeECcCCcCCHHHHHHHHHhCCCcEEEEecCc
Confidence 67788888888888887643 33344567888888888888875433333 34566666555544
No 303
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.95 E-value=4.8e-27 Score=262.36 Aligned_cols=248 Identities=23% Similarity=0.245 Sum_probs=182.7
Q ss_pred CEEEcccCCCcccCChhhcCCCCCCEEeCcCCCCCCCCCccccCCCCCCeEEccCcccccc--cCccccCCCCCcEEEcc
Q 045553 113 RVLLLAFNGFSGELPLEIGQLSLLEILDLSFNSFHGPIPPTLQNCSSLRLINLSGNQFNGT--IPAFFGQSPGFQVVSLS 190 (1082)
Q Consensus 113 ~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~--~p~~~~~l~~L~~L~L~ 190 (1082)
+.++.++++++ .+|..+. ++|++|+|++|.++...+..|.++++|++|+|++|+++.. .+..+..+++|++|+|+
T Consensus 10 ~~l~c~~~~l~-~ip~~~~--~~l~~L~L~~n~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~Ls 86 (306)
T 2z66_A 10 TEIRCNSKGLT-SVPTGIP--SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDFGTTSLKYLDLS 86 (306)
T ss_dssp TEEECCSSCCS-SCCSCCC--TTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCEEEEEEHHHHSCSCCCEEECC
T ss_pred CEEEcCCCCcc-cCCCCCC--CCCCEEECCCCccCccCHhHhhccccCCEEECCCCccCcccCcccccccccccCEEECC
Confidence 46788888887 6676443 6888888888888844444578888888888888888733 35666677888888888
Q ss_pred cCcccccCCcccccccccccEEEcccCccCCCCC-ccccCCCCccEEEccCCcCCCCcCccccCCCCCCEEeCCCCcCcc
Q 045553 191 FNLLSGSVPEEFGDNCVSLEHILLAANSLTGSIP-PSLGNCTELRSLLLSSNMLQGDIPSSFGQLVNLEVLDLSRNFLSG 269 (1082)
Q Consensus 191 ~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 269 (1082)
+|.+. .+|..+. .+++|++|++++|++++..+ ..+..+++|++|++++|.+.+..+..|..+++|++|++++|.+++
T Consensus 87 ~n~i~-~l~~~~~-~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~ 164 (306)
T 2z66_A 87 FNGVI-TMSSNFL-GLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQE 164 (306)
T ss_dssp SCSEE-EEEEEEE-TCTTCCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTTCTTCCEEECTTCEEGG
T ss_pred CCccc-cChhhcC-CCCCCCEEECCCCcccccccchhhhhccCCCEEECCCCcCCccchhhcccCcCCCEEECCCCcccc
Confidence 88777 4555543 46666666666666664433 355566666666666666655555555566666666666665543
Q ss_pred cCCccccCCCCCcEEEeccccCCcccccCCCCCCcccccCCCcccccCCCCCccccCCCCCcEEEcCCCcccCCCCcccc
Q 045553 270 IVPSELGMCKQLKVLVLRNDYGPLYSREHGDLPIQPVVDGGEDYNFFDGGLPDSITRLPNLRVFWAPNLNLEGIFPQNWE 349 (1082)
Q Consensus 270 ~~p~~l~~l~~L~~L~l~~n~~~~~~~~~~~l~~~~~~~~~~~~n~~~~~~p~~l~~l~~L~~L~l~~n~l~~~~~~~l~ 349 (1082)
. .+|..+..+++|++|++++|.+.+..|..+.
T Consensus 165 ~------------------------------------------------~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~ 196 (306)
T 2z66_A 165 N------------------------------------------------FLPDIFTELRNLTFLDLSQCQLEQLSPTAFN 196 (306)
T ss_dssp G------------------------------------------------EECSCCTTCTTCCEEECTTSCCCEECTTTTT
T ss_pred c------------------------------------------------cchhHHhhCcCCCEEECCCCCcCCcCHHHhc
Confidence 1 2344556667777777777788888888899
Q ss_pred cccCCCeEEcCCccccCCCCccccCCCCCCEEecCCCcCcccCCCCc-cc-CcccEEEecCCccee
Q 045553 350 LCSKLEMLNLAHNFFTGQIPASLGNCKSLYFLDLSSNNLTGLLPEEV-SV-PCMAVFNVSQNLLSG 413 (1082)
Q Consensus 350 ~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~-~l-~~L~~L~l~~N~l~~ 413 (1082)
.+++|++|+|++|++++..+..+..+++|+.|+|++|++++.+|..+ .+ ++|+.|++++|++++
T Consensus 197 ~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~L~L~~N~~~~ 262 (306)
T 2z66_A 197 SLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFAC 262 (306)
T ss_dssp TCTTCCEEECTTSCCSBCCSGGGTTCTTCCEEECTTSCCCBCSSSSCCCCCTTCCEEECTTCCEEC
T ss_pred CCCCCCEEECCCCccCccChhhccCcccCCEeECCCCCCcccCHHHHHhhhccCCEEEccCCCeec
Confidence 99999999999999997777789999999999999999999988877 45 489999999999974
No 304
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.95 E-value=7e-28 Score=274.92 Aligned_cols=281 Identities=17% Similarity=0.169 Sum_probs=237.9
Q ss_pred ccCCCCCCEEEcccCCCcccCChhhcCCCCCCEEeCcCCCCCCCCCccccCCCCCCeEEccCcccccccCccccCCCCCc
Q 045553 106 IGDLTQLRVLLLAFNGFSGELPLEIGQLSLLEILDLSFNSFHGPIPPTLQNCSSLRLINLSGNQFNGTIPAFFGQSPGFQ 185 (1082)
Q Consensus 106 l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~ 185 (1082)
-..++.....++++++++ .+|..+. ++|++|+|++|.+++..+..|.++++|++|+|++|++++..|..|.++++|+
T Consensus 27 ~~~C~~~~~c~~~~~~l~-~iP~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~ 103 (353)
T 2z80_A 27 SLSCDRNGICKGSSGSLN-SIPSGLT--EAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLE 103 (353)
T ss_dssp CCEECTTSEEECCSTTCS-SCCTTCC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCC
T ss_pred CCCCCCCeEeeCCCCCcc-ccccccc--ccCcEEECCCCcCcccCHHHhccCCCCCEEECCCCccCccCHhhcCCCCCCC
Confidence 334455567899999999 7887665 5999999999999976666899999999999999999988889999999999
Q ss_pred EEEcccCcccccCCcccccccccccEEEcccCccCCCCC-ccccCCCCccEEEccCC-cCCCCcCccccCCCCCCEEeCC
Q 045553 186 VVSLSFNLLSGSVPEEFGDNCVSLEHILLAANSLTGSIP-PSLGNCTELRSLLLSSN-MLQGDIPSSFGQLVNLEVLDLS 263 (1082)
Q Consensus 186 ~L~L~~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~~l~~L~~L~L~~N-~l~~~~p~~~~~l~~L~~L~Ls 263 (1082)
+|+|++|+++ .+|...+..+++|++|++++|++++..+ ..+.++++|++|++++| .+++..+..|..+++|++|+++
T Consensus 104 ~L~Ls~n~l~-~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~ 182 (353)
T 2z80_A 104 HLDLSYNYLS-NLSSSWFKPLSSLTFLNLLGNPYKTLGETSLFSHLTKLQILRVGNMDTFTKIQRKDFAGLTFLEELEID 182 (353)
T ss_dssp EEECCSSCCS-SCCHHHHTTCTTCSEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEE
T ss_pred EEECCCCcCC-cCCHhHhCCCccCCEEECCCCCCcccCchhhhccCCCCcEEECCCCccccccCHHHccCCCCCCEEECC
Confidence 9999999999 6777655579999999999999995444 47899999999999999 5776667889999999999999
Q ss_pred CCcCcccCCccccCCCCCcEEEeccccCCcccccCCCCCCcccccCCCcccccCCCCCc-cccCCCCCcEEEcCCCcccC
Q 045553 264 RNFLSGIVPSELGMCKQLKVLVLRNDYGPLYSREHGDLPIQPVVDGGEDYNFFDGGLPD-SITRLPNLRVFWAPNLNLEG 342 (1082)
Q Consensus 264 ~N~l~~~~p~~l~~l~~L~~L~l~~n~~~~~~~~~~~l~~~~~~~~~~~~n~~~~~~p~-~l~~l~~L~~L~l~~n~l~~ 342 (1082)
+|++++..|..+..+++|++|++++|.+. .+|. .+..+++|+.|++++|.+.+
T Consensus 183 ~n~l~~~~~~~l~~l~~L~~L~l~~n~l~--------------------------~~~~~~~~~~~~L~~L~L~~n~l~~ 236 (353)
T 2z80_A 183 ASDLQSYEPKSLKSIQNVSHLILHMKQHI--------------------------LLLEIFVDVTSSVECLELRDTDLDT 236 (353)
T ss_dssp ETTCCEECTTTTTTCSEEEEEEEECSCST--------------------------THHHHHHHHTTTEEEEEEESCBCTT
T ss_pred CCCcCccCHHHHhccccCCeecCCCCccc--------------------------cchhhhhhhcccccEEECCCCcccc
Confidence 99999999999999999999999986432 2333 34568999999999999998
Q ss_pred CCCcccc---cccCCCeEEcCCccccC----CCCccccCCCCCCEEecCCCcCcccCCCCc-ccCcccEEEecCCcceec
Q 045553 343 IFPQNWE---LCSKLEMLNLAHNFFTG----QIPASLGNCKSLYFLDLSSNNLTGLLPEEV-SVPCMAVFNVSQNLLSGE 414 (1082)
Q Consensus 343 ~~~~~l~---~l~~L~~L~Ls~N~i~~----~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~-~l~~L~~L~l~~N~l~~~ 414 (1082)
..+..+. ....++.++|++|.+++ .+|..+..+++|+.|+|++|+|+..++..+ .+++|+.|++++|++.+.
T Consensus 237 ~~~~~l~~~~~~~~l~~l~L~~~~l~~~~l~~l~~~l~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N~~~~~ 316 (353)
T 2z80_A 237 FHFSELSTGETNSLIKKFTFRNVKITDESLFQVMKLLNQISGLLELEFSRNQLKSVPDGIFDRLTSLQKIWLHTNPWDCS 316 (353)
T ss_dssp CCCC------CCCCCCEEEEESCBCCHHHHHHHHHHHHTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCBCCC
T ss_pred ccccccccccccchhhccccccccccCcchhhhHHHHhcccCCCEEECCCCCCCccCHHHHhcCCCCCEEEeeCCCccCc
Confidence 7766543 46778899999998875 478889999999999999999997666654 789999999999999864
Q ss_pred CC
Q 045553 415 IP 416 (1082)
Q Consensus 415 ~~ 416 (1082)
.|
T Consensus 317 ~~ 318 (353)
T 2z80_A 317 CP 318 (353)
T ss_dssp HH
T ss_pred CC
Confidence 43
No 305
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.95 E-value=4.8e-27 Score=264.32 Aligned_cols=238 Identities=18% Similarity=0.196 Sum_probs=215.4
Q ss_pred CCCCCCEEEcccCCCcccCChhhcCCCCCCEEeCcCCCCCCCCCccccCCCCCCeEEccCcccccccCccccCCCCCcEE
Q 045553 108 DLTQLRVLLLAFNGFSGELPLEIGQLSLLEILDLSFNSFHGPIPPTLQNCSSLRLINLSGNQFNGTIPAFFGQSPGFQVV 187 (1082)
Q Consensus 108 ~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 187 (1082)
...+++.|+|++|+++ .+|..++++++|++|+|++|.++ .+|..++++++|++|+|++|+++ .+|..|+.+++|++|
T Consensus 79 ~~~~l~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L 155 (328)
T 4fcg_A 79 TQPGRVALELRSVPLP-QFPDQAFRLSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLREL 155 (328)
T ss_dssp TSTTCCEEEEESSCCS-SCCSCGGGGTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEE
T ss_pred cccceeEEEccCCCch-hcChhhhhCCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEE
Confidence 3578999999999999 88989999999999999999999 89999999999999999999999 789999999999999
Q ss_pred EcccCcccccCCcccccccccccEEEcccCccCCCCCccccCCCCccEEEccCCcCCCCcCccccCCCCCCEEeCCCCcC
Q 045553 188 SLSFNLLSGSVPEEFGDNCVSLEHILLAANSLTGSIPPSLGNCTELRSLLLSSNMLQGDIPSSFGQLVNLEVLDLSRNFL 267 (1082)
Q Consensus 188 ~L~~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l 267 (1082)
+|++|++.+.+|..+... ..+..+.++++|++|+|++|+++ .+|..++.+++|++|+|++|++
T Consensus 156 ~L~~n~~~~~~p~~~~~~----------------~~~~~~~~l~~L~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~N~l 218 (328)
T 4fcg_A 156 SIRACPELTELPEPLAST----------------DASGEHQGLVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPL 218 (328)
T ss_dssp EEEEETTCCCCCSCSEEE----------------C-CCCEEESTTCCEEEEEEECCC-CCCGGGGGCTTCCEEEEESSCC
T ss_pred ECCCCCCccccChhHhhc----------------cchhhhccCCCCCEEECcCCCcC-cchHhhcCCCCCCEEEccCCCC
Confidence 999998888888776521 23345788999999999999999 7899999999999999999999
Q ss_pred cccCCccccCCCCCcEEEeccccCCcccccCCCCCCcccccCCCcccccCCCCCccccCCCCCcEEEcCCCcccCCCCcc
Q 045553 268 SGIVPSELGMCKQLKVLVLRNDYGPLYSREHGDLPIQPVVDGGEDYNFFDGGLPDSITRLPNLRVFWAPNLNLEGIFPQN 347 (1082)
Q Consensus 268 ~~~~p~~l~~l~~L~~L~l~~n~~~~~~~~~~~l~~~~~~~~~~~~n~~~~~~p~~l~~l~~L~~L~l~~n~l~~~~~~~ 347 (1082)
++ +|..+..+++|++|++++ |.+.+.+|..+..+++|++|++++|++.+..|..
T Consensus 219 ~~-l~~~l~~l~~L~~L~Ls~-------------------------n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~~p~~ 272 (328)
T 4fcg_A 219 SA-LGPAIHHLPKLEELDLRG-------------------------CTALRNYPPIFGGRAPLKRLILKDCSNLLTLPLD 272 (328)
T ss_dssp CC-CCGGGGGCTTCCEEECTT-------------------------CTTCCBCCCCTTCCCCCCEEECTTCTTCCBCCTT
T ss_pred Cc-CchhhccCCCCCEEECcC-------------------------CcchhhhHHHhcCCCCCCEEECCCCCchhhcchh
Confidence 95 677899999999999987 4566678999999999999999999999999999
Q ss_pred cccccCCCeEEcCCccccCCCCccccCCCCCCEEecCCCcCccc
Q 045553 348 WELCSKLEMLNLAHNFFTGQIPASLGNCKSLYFLDLSSNNLTGL 391 (1082)
Q Consensus 348 l~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 391 (1082)
+..+++|++|+|++|.+.+.+|..++++++|+.+++..|.+...
T Consensus 273 ~~~l~~L~~L~L~~n~~~~~iP~~l~~L~~L~~l~l~~~~~~~l 316 (328)
T 4fcg_A 273 IHRLTQLEKLDLRGCVNLSRLPSLIAQLPANCIILVPPHLQAQL 316 (328)
T ss_dssp GGGCTTCCEEECTTCTTCCCCCGGGGGSCTTCEEECCGGGSCC-
T ss_pred hhcCCCCCEEeCCCCCchhhccHHHhhccCceEEeCCHHHHHHH
Confidence 99999999999999999999999999999999999998877643
No 306
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.95 E-value=1.1e-26 Score=273.13 Aligned_cols=133 Identities=23% Similarity=0.275 Sum_probs=108.2
Q ss_pred CCcccEEEccC-CcccccCccccCCCCCCCEEEccCCCCCCCCcccccCCCCCCEEEcCCCcCCccCchhhhcCcccchh
Q 045553 542 CKCMKFLSMAG-NEFVGLIPQSFTNFDSLRNLNLSRNHLQGPLPSYINKMEDLKFLSLSLNNFTGAIPWELTQLASLEVL 620 (1082)
Q Consensus 542 ~~~L~~L~L~~-N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 620 (1082)
+++|++|+|++ |.+..+.+..|.++++|++|+|++|.++ .+| .+..+++|+.|+|++|++++..|..|.++++|+.|
T Consensus 159 l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~-~~~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 236 (440)
T 3zyj_A 159 IPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLR-EIP-NLTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKL 236 (440)
T ss_dssp CTTCCEEECCCCTTCCEECTTTTTTCSSCCEEECTTSCCS-SCC-CCTTCSSCCEEECTTSCCCEECTTTTTTCTTCCEE
T ss_pred CcccCEeCCCCCCCcceeCcchhhcccccCeecCCCCcCc-ccc-ccCCCcccCEEECCCCccCccChhhhccCccCCEE
Confidence 34466666665 3444455557778888888888888888 344 47888889999999999998888889999999999
Q ss_pred hccCcccCCCCCccccCCcccceecccCcccCCCCCCCCCCCCcccEEeccCCccc
Q 045553 621 ELSANSLSGEIPSEFSKLEHLNVLRLDHNNLTGRIPPGFGTRSSLSIFDVSFNNLS 676 (1082)
Q Consensus 621 ~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~l~ls~N~l~ 676 (1082)
+|++|+|++..+..|..+++|+.|+|++|+|++..+..|..+++|+.|+|++|+|.
T Consensus 237 ~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~ 292 (440)
T 3zyj_A 237 WMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLHHLERIHLHHNPWN 292 (440)
T ss_dssp ECTTCCCCEECTTSSTTCTTCCEEECTTSCCCCCCTTTTSSCTTCCEEECCSSCEE
T ss_pred ECCCCceeEEChhhhcCCCCCCEEECCCCCCCccChhHhccccCCCEEEcCCCCcc
Confidence 99999999888888999999999999999999888888899999999998666554
No 307
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.95 E-value=1.3e-26 Score=273.71 Aligned_cols=138 Identities=22% Similarity=0.232 Sum_probs=111.6
Q ss_pred cCCcccEEEccC-CcccccCccccCCCCCCCEEEccCCCCCCCCcccccCCCCCCEEEcCCCcCCccCchhhhcCcccch
Q 045553 541 HCKCMKFLSMAG-NEFVGLIPQSFTNFDSLRNLNLSRNHLQGPLPSYINKMEDLKFLSLSLNNFTGAIPWELTQLASLEV 619 (1082)
Q Consensus 541 ~~~~L~~L~L~~-N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 619 (1082)
.+++|++|++++ |.+..+.+..|.++++|++|+|++|++++. | .+..+++|+.|+|++|++++..|..|.++++|++
T Consensus 169 ~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~~-~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~ 246 (452)
T 3zyi_A 169 RVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIKDM-P-NLTPLVGLEELEMSGNHFPEIRPGSFHGLSSLKK 246 (452)
T ss_dssp TCTTCCEEECCCCTTCCEECTTTTTTCTTCCEEECTTSCCSSC-C-CCTTCTTCCEEECTTSCCSEECGGGGTTCTTCCE
T ss_pred cCCcccEEeCCCCCCccccChhhccCCCCCCEEECCCCccccc-c-cccccccccEEECcCCcCcccCcccccCccCCCE
Confidence 344466666666 444555556778888888888888888854 4 4778889999999999999888888999999999
Q ss_pred hhccCcccCCCCCccccCCcccceecccCcccCCCCCCCCCCCCcccEEeccCCccccCCC
Q 045553 620 LELSANSLSGEIPSEFSKLEHLNVLRLDHNNLTGRIPPGFGTRSSLSIFDVSFNNLSGSAP 680 (1082)
Q Consensus 620 L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~l~ls~N~l~~~~p 680 (1082)
|+|++|+|++..|..|..+++|+.|+|++|+|++..+..|..+++|+.|+|++|++.|.+.
T Consensus 247 L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~CdC~ 307 (452)
T 3zyi_A 247 LWVMNSQVSLIERNAFDGLASLVELNLAHNNLSSLPHDLFTPLRYLVELHLHHNPWNCDCD 307 (452)
T ss_dssp EECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTSSTTCTTCCEEECCSSCEECSTT
T ss_pred EEeCCCcCceECHHHhcCCCCCCEEECCCCcCCccChHHhccccCCCEEEccCCCcCCCCC
Confidence 9999999998888889999999999999999998888888999999999997776664443
No 308
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.94 E-value=2.5e-26 Score=271.19 Aligned_cols=247 Identities=20% Similarity=0.210 Sum_probs=166.0
Q ss_pred CCCEEEcccCCCcccCChhhcCCCCCCEEeCcCCCCCCCCCccccCCCCCCeEEccCcccccccCccccCCCCCcEEEcc
Q 045553 111 QLRVLLLAFNGFSGELPLEIGQLSLLEILDLSFNSFHGPIPPTLQNCSSLRLINLSGNQFNGTIPAFFGQSPGFQVVSLS 190 (1082)
Q Consensus 111 ~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~ 190 (1082)
..+.++.++++++ .+|..+. ++|++|+|++|.|++..|..|.++++|++|+|++|+|++..+..|.++++|++|+|+
T Consensus 55 ~~~~v~c~~~~l~-~iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~ 131 (452)
T 3zyi_A 55 QFSKVVCTRRGLS-EVPQGIP--SNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELF 131 (452)
T ss_dssp SSCEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECC
T ss_pred CCcEEEECCCCcC-ccCCCCC--CCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEECC
Confidence 3456777777777 5665543 678888888888887777788888888888888888887777778888888888888
Q ss_pred cCcccccCCcccccccccccEEEcccCccCCCCCccccCCCCccEEEccCC-cCCCCcCccccCCCCCCEEeCCCCcCcc
Q 045553 191 FNLLSGSVPEEFGDNCVSLEHILLAANSLTGSIPPSLGNCTELRSLLLSSN-MLQGDIPSSFGQLVNLEVLDLSRNFLSG 269 (1082)
Q Consensus 191 ~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N-~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 269 (1082)
+|+++ .+|...+..+++|++|+|++|+++...+..|.++++|+.|++++| .+....+..|..+++|++|+|++|++++
T Consensus 132 ~n~l~-~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~ 210 (452)
T 3zyi_A 132 DNWLT-VIPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIKD 210 (452)
T ss_dssp SSCCS-BCCTTTSSSCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCTTCCEEECTTSCCSS
T ss_pred CCcCC-ccChhhhcccCCCCEEECCCCCcceeCHhHHhcCCcccEEeCCCCCCccccChhhccCCCCCCEEECCCCcccc
Confidence 88777 555544445677777777777777555556677777777777763 3433333456667777777777776653
Q ss_pred cCCccccCCCCCcEEEeccccCCcccccCCCCCCcccccCCCcccccCCCCCccccCCCCCcEEEcCCCcccCCCCcccc
Q 045553 270 IVPSELGMCKQLKVLVLRNDYGPLYSREHGDLPIQPVVDGGEDYNFFDGGLPDSITRLPNLRVFWAPNLNLEGIFPQNWE 349 (1082)
Q Consensus 270 ~~p~~l~~l~~L~~L~l~~n~~~~~~~~~~~l~~~~~~~~~~~~n~~~~~~p~~l~~l~~L~~L~l~~n~l~~~~~~~l~ 349 (1082)
. | .+. .+++|+.|++++|.+.++.|..|.
T Consensus 211 ~-~-~~~-------------------------------------------------~l~~L~~L~Ls~N~l~~~~~~~~~ 239 (452)
T 3zyi_A 211 M-P-NLT-------------------------------------------------PLVGLEELEMSGNHFPEIRPGSFH 239 (452)
T ss_dssp C-C-CCT-------------------------------------------------TCTTCCEEECTTSCCSEECGGGGT
T ss_pred c-c-ccc-------------------------------------------------ccccccEEECcCCcCcccCccccc
Confidence 2 2 233 344555555555566666666666
Q ss_pred cccCCCeEEcCCccccCCCCccccCCCCCCEEecCCCcCcccCCCCc-ccCcccEEEecCCcce
Q 045553 350 LCSKLEMLNLAHNFFTGQIPASLGNCKSLYFLDLSSNNLTGLLPEEV-SVPCMAVFNVSQNLLS 412 (1082)
Q Consensus 350 ~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~-~l~~L~~L~l~~N~l~ 412 (1082)
.+++|+.|+|++|++++..+..|..+++|+.|+|++|+|++.++..+ .+++|+.|++++|++.
T Consensus 240 ~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~ 303 (452)
T 3zyi_A 240 GLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSSLPHDLFTPLRYLVELHLHHNPWN 303 (452)
T ss_dssp TCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTSSTTCTTCCEEECCSSCEE
T ss_pred CccCCCEEEeCCCcCceECHHHhcCCCCCCEEECCCCcCCccChHHhccccCCCEEEccCCCcC
Confidence 66666666666666666666666666777777777777766665555 4666777777777664
No 309
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.94 E-value=2.8e-26 Score=269.88 Aligned_cols=247 Identities=20% Similarity=0.201 Sum_probs=168.0
Q ss_pred CCCEEEcccCCCcccCChhhcCCCCCCEEeCcCCCCCCCCCccccCCCCCCeEEccCcccccccCccccCCCCCcEEEcc
Q 045553 111 QLRVLLLAFNGFSGELPLEIGQLSLLEILDLSFNSFHGPIPPTLQNCSSLRLINLSGNQFNGTIPAFFGQSPGFQVVSLS 190 (1082)
Q Consensus 111 ~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~ 190 (1082)
..+.++.++++++ .+|..+. ++++.|+|++|.+++..+..|.++++|++|+|++|++++..+..|.++++|++|+|+
T Consensus 44 ~~~~v~c~~~~l~-~iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~ 120 (440)
T 3zyj_A 44 QFSKVICVRKNLR-EVPDGIS--TNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELF 120 (440)
T ss_dssp TSCEEECCSCCCS-SCCSCCC--TTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECC
T ss_pred CCCEEEeCCCCcC-cCCCCCC--CCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEECC
Confidence 3456777777777 6676554 678888888888887677778888888888888888887667777777888888887
Q ss_pred cCcccccCCcccccccccccEEEcccCccCCCCCccccCCCCccEEEccCCc-CCCCcCccccCCCCCCEEeCCCCcCcc
Q 045553 191 FNLLSGSVPEEFGDNCVSLEHILLAANSLTGSIPPSLGNCTELRSLLLSSNM-LQGDIPSSFGQLVNLEVLDLSRNFLSG 269 (1082)
Q Consensus 191 ~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~-l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 269 (1082)
+|+++ .+|...+..+++|++|+|++|+++...+..|.++++|++|+|++|+ +....+..|..+++|++|+|++|+++
T Consensus 121 ~n~l~-~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~- 198 (440)
T 3zyj_A 121 DNRLT-TIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLR- 198 (440)
T ss_dssp SSCCS-SCCTTTSCSCSSCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCSSCCEEECTTSCCS-
T ss_pred CCcCC-eeCHhHhhccccCceeeCCCCcccccCHHHhhhCcccCEeCCCCCCCcceeCcchhhcccccCeecCCCCcCc-
Confidence 77777 4554444456666666666666665555566666666666666633 33223335666666666666666665
Q ss_pred cCCccccCCCCCcEEEeccccCCcccccCCCCCCcccccCCCcccccCCCCCccccCCCCCcEEEcCCCcccCCCCcccc
Q 045553 270 IVPSELGMCKQLKVLVLRNDYGPLYSREHGDLPIQPVVDGGEDYNFFDGGLPDSITRLPNLRVFWAPNLNLEGIFPQNWE 349 (1082)
Q Consensus 270 ~~p~~l~~l~~L~~L~l~~n~~~~~~~~~~~l~~~~~~~~~~~~n~~~~~~p~~l~~l~~L~~L~l~~n~l~~~~~~~l~ 349 (1082)
.+| . +..+++|+.|++++|++.++.+..|.
T Consensus 199 ~~~-~-------------------------------------------------~~~l~~L~~L~Ls~N~l~~~~~~~~~ 228 (440)
T 3zyj_A 199 EIP-N-------------------------------------------------LTPLIKLDELDLSGNHLSAIRPGSFQ 228 (440)
T ss_dssp SCC-C-------------------------------------------------CTTCSSCCEEECTTSCCCEECTTTTT
T ss_pred ccc-c-------------------------------------------------cCCCcccCEEECCCCccCccChhhhc
Confidence 222 1 34455566666666666666666677
Q ss_pred cccCCCeEEcCCccccCCCCccccCCCCCCEEecCCCcCcccCCCCc-ccCcccEEEecCCcce
Q 045553 350 LCSKLEMLNLAHNFFTGQIPASLGNCKSLYFLDLSSNNLTGLLPEEV-SVPCMAVFNVSQNLLS 412 (1082)
Q Consensus 350 ~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~-~l~~L~~L~l~~N~l~ 412 (1082)
.+++|+.|+|++|+|++..+..|.++++|+.|+|++|+|++.++..+ .+++|+.|++++|++.
T Consensus 229 ~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~ 292 (440)
T 3zyj_A 229 GLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLHHLERIHLHHNPWN 292 (440)
T ss_dssp TCTTCCEEECTTCCCCEECTTSSTTCTTCCEEECTTSCCCCCCTTTTSSCTTCCEEECCSSCEE
T ss_pred cCccCCEEECCCCceeEEChhhhcCCCCCCEEECCCCCCCccChhHhccccCCCEEEcCCCCcc
Confidence 77777777777777776666777777777777777777776666655 4677777777777764
No 310
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.94 E-value=4.7e-28 Score=271.05 Aligned_cols=249 Identities=21% Similarity=0.205 Sum_probs=167.1
Q ss_pred cccCCCCCCEEEcccCCCcccCChhhcCCCCCCEEeCcCCCCC-CCCCcccc-------CCCCCCeEEccCcccccccCc
Q 045553 105 AIGDLTQLRVLLLAFNGFSGELPLEIGQLSLLEILDLSFNSFH-GPIPPTLQ-------NCSSLRLINLSGNQFNGTIPA 176 (1082)
Q Consensus 105 ~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~-~~~p~~l~-------~l~~L~~L~Ls~N~l~~~~p~ 176 (1082)
.++..++|++|++++|.+ .+|..+... |+.|+|++|.++ ..+|..+. ++++|++|+|++|++++.+|.
T Consensus 38 ~~~~~~~L~~l~l~~n~l--~~p~~~~~~--L~~L~L~~n~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~ 113 (312)
T 1wwl_A 38 LYGGGRSLEYLLKRVDTE--ADLGQFTDI--IKSLSLKRLTVRAARIPSRILFGALRVLGISGLQELTLENLEVTGTAPP 113 (312)
T ss_dssp EEEEEEECTTHHHHCCTT--CCCHHHHHH--HHHCCCCEEEEEEEECBHHHHHHHHHHHTTSCCCEEEEEEEBCBSCCCC
T ss_pred EEccCCCceeEeeccccc--ccHHHHHHH--HhhcccccccccCCCcCHHHHHHHHHhcCcCCccEEEccCCcccchhHH
Confidence 456677888888888888 677766655 888888888884 45666665 788888888888888888887
Q ss_pred cc--cCCCCCcEEEcccCcccccCCccccccc-----ccccEEEcccCccCCCCCccccCCCCccEEEccCCcCCCC--c
Q 045553 177 FF--GQSPGFQVVSLSFNLLSGSVPEEFGDNC-----VSLEHILLAANSLTGSIPPSLGNCTELRSLLLSSNMLQGD--I 247 (1082)
Q Consensus 177 ~~--~~l~~L~~L~L~~N~l~~~~p~~~~~~l-----~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~--~ 247 (1082)
.+ ..+++|++|+|++|++++. |..+. .+ ++|++|+|++|++++..+..++++++|++|+|++|++.+. .
T Consensus 114 ~~~~~~l~~L~~L~Ls~N~l~~~-~~~~~-~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~ 191 (312)
T 1wwl_A 114 PLLEATGPDLNILNLRNVSWATR-DAWLA-ELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGERGL 191 (312)
T ss_dssp CSSSCCSCCCSEEEEESCBCSSS-SSHHH-HHHTTCCTTCCEEEEESCSCCCCCTTTCCCCSSCCEEECCSCTTCHHHHH
T ss_pred HHHHhcCCCccEEEccCCCCcch-hHHHH-HHHHhhcCCCcEEEeeCCCCccchHHHhccCCCCCEEECCCCCcCcchHH
Confidence 65 7888888888888888855 65554 34 7788888888888777667777888888888888877654 2
Q ss_pred Cccc--cCCCCCCEEeCCCCcCccc---CCccccCCCCCcEEEeccccCCcccccCCCCCCcccccCCCcccccCCCCCc
Q 045553 248 PSSF--GQLVNLEVLDLSRNFLSGI---VPSELGMCKQLKVLVLRNDYGPLYSREHGDLPIQPVVDGGEDYNFFDGGLPD 322 (1082)
Q Consensus 248 p~~~--~~l~~L~~L~Ls~N~l~~~---~p~~l~~l~~L~~L~l~~n~~~~~~~~~~~l~~~~~~~~~~~~n~~~~~~p~ 322 (1082)
+..+ ..+++|++|+|++|++++. ....+..+++|++|+++
T Consensus 192 ~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls----------------------------------- 236 (312)
T 1wwl_A 192 ISALCPLKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLS----------------------------------- 236 (312)
T ss_dssp HHHSCTTSCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECT-----------------------------------
T ss_pred HHHHHhccCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECC-----------------------------------
Confidence 3334 6777788888888777631 11223344555555554
Q ss_pred cccCCCCCcEEEcCCCcccCCCC-cccccccCCCeEEcCCccccCCCCccccCCCCCCEEecCCCcCcccCCCCcccCcc
Q 045553 323 SITRLPNLRVFWAPNLNLEGIFP-QNWELCSKLEMLNLAHNFFTGQIPASLGNCKSLYFLDLSSNNLTGLLPEEVSVPCM 401 (1082)
Q Consensus 323 ~l~~l~~L~~L~l~~n~l~~~~~-~~l~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~l~~L 401 (1082)
+|.+.+..| ..+..+++|++|+|++|+|+ .+|..+. ++|+.|+|++|+|++. |....+++|
T Consensus 237 --------------~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~-~ip~~~~--~~L~~L~Ls~N~l~~~-p~~~~l~~L 298 (312)
T 1wwl_A 237 --------------HNSLRDAAGAPSCDWPSQLNSLNLSFTGLK-QVPKGLP--AKLSVLDLSYNRLDRN-PSPDELPQV 298 (312)
T ss_dssp --------------TSCCCSSCCCSCCCCCTTCCEEECTTSCCS-SCCSSCC--SEEEEEECCSSCCCSC-CCTTTSCEE
T ss_pred --------------CCcCCcccchhhhhhcCCCCEEECCCCccC-hhhhhcc--CCceEEECCCCCCCCC-hhHhhCCCC
Confidence 444444432 23444556666666666666 5555554 5666666666666655 333355666
Q ss_pred cEEEecCCcce
Q 045553 402 AVFNVSQNLLS 412 (1082)
Q Consensus 402 ~~L~l~~N~l~ 412 (1082)
+.|++++|+++
T Consensus 299 ~~L~L~~N~l~ 309 (312)
T 1wwl_A 299 GNLSLKGNPFL 309 (312)
T ss_dssp EEEECTTCTTT
T ss_pred CEEeccCCCCC
Confidence 66666666655
No 311
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.94 E-value=1.6e-26 Score=279.56 Aligned_cols=289 Identities=23% Similarity=0.251 Sum_probs=225.9
Q ss_pred CCCCCCCCCCCCCCCceeeeeEee------CCCCCeeeeecCCCccccccccCCCCCCCCCCCCcccCcCcccccccccC
Q 045553 15 PLGLTSNWNPKDTDSCSWHGVTCD------PLSGRVTSLNLSSNLSRTSCSLLSLPPAAGPGGNFSFHFPCLQLHQHDRG 88 (1082)
Q Consensus 15 ~~~~~~~W~~~~~~~c~w~gv~C~------~~~~~v~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (1082)
....+++|.. +.+||.|.|..|. -....++.|+++++
T Consensus 8 ~~~~w~~W~~-~~~~~~~~~r~~~~~~~~~c~~~~l~~L~ls~n------------------------------------ 50 (622)
T 3g06_A 8 YDAVWSAWRR-AAPAEESRGRAAVVQKMRACLNNGNAVLNVGES------------------------------------ 50 (622)
T ss_dssp --CHHHHHHH-TCCGGGHHHHHHHHHHHHHHHHHCCCEEECCSS------------------------------------
T ss_pred HHHHHHHHHh-cCCcchhccccccCcccccccCCCCcEEEecCC------------------------------------
Confidence 3445667863 5789999774331 11234777887763
Q ss_pred cccCCCCCCccccccccccCCCCCCEEEcccCCCcccCChhhcCCCCCCEEeCcCCCCCCCCCccccCCCCCCeEEccCc
Q 045553 89 NINSNSSDKLSGNLSRAIGDLTQLRVLLLAFNGFSGELPLEIGQLSLLEILDLSFNSFHGPIPPTLQNCSSLRLINLSGN 168 (1082)
Q Consensus 89 ~~~~~~~~~l~g~l~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N 168 (1082)
++. .+|..+. ++|++|+|++|+|+ .+|. .+++|++|+|++|.|+ .+|. .+++|++|+|++|
T Consensus 51 --------~L~-~lp~~l~--~~L~~L~L~~N~l~-~lp~---~l~~L~~L~Ls~N~l~-~lp~---~l~~L~~L~Ls~N 111 (622)
T 3g06_A 51 --------GLT-TLPDCLP--AHITTLVIPDNNLT-SLPA---LPPELRTLEVSGNQLT-SLPV---LPPGLLELSIFSN 111 (622)
T ss_dssp --------CCS-CCCSCCC--TTCSEEEECSCCCS-CCCC---CCTTCCEEEECSCCCS-CCCC---CCTTCCEEEECSC
T ss_pred --------CcC-ccChhhC--CCCcEEEecCCCCC-CCCC---cCCCCCEEEcCCCcCC-cCCC---CCCCCCEEECcCC
Confidence 233 4555554 79999999999999 6776 6799999999999999 6776 7899999999999
Q ss_pred ccccccCccccCCCCCcEEEcccCcccccCCcccccccccccEEEcccCccCCCCCccccCCCCccEEEccCCcCCCCcC
Q 045553 169 QFNGTIPAFFGQSPGFQVVSLSFNLLSGSVPEEFGDNCVSLEHILLAANSLTGSIPPSLGNCTELRSLLLSSNMLQGDIP 248 (1082)
Q Consensus 169 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p 248 (1082)
++++ +|. .+++|+.|++++|+++ .+|.. +++|++|+|++|++++ +|. .+++|+.|++++|++++ +|
T Consensus 112 ~l~~-l~~---~l~~L~~L~L~~N~l~-~lp~~----l~~L~~L~Ls~N~l~~-l~~---~~~~L~~L~L~~N~l~~-l~ 177 (622)
T 3g06_A 112 PLTH-LPA---LPSGLCKLWIFGNQLT-SLPVL----PPGLQELSVSDNQLAS-LPA---LPSELCKLWAYNNQLTS-LP 177 (622)
T ss_dssp CCCC-CCC---CCTTCCEEECCSSCCS-CCCCC----CTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CC
T ss_pred cCCC-CCC---CCCCcCEEECCCCCCC-cCCCC----CCCCCEEECcCCcCCC-cCC---ccCCCCEEECCCCCCCC-Cc
Confidence 9995 454 6789999999999998 57764 4799999999999994 454 34689999999999995 66
Q ss_pred ccccCCCCCCEEeCCCCcCcccCCccccCCCCCcEEEeccccCCcccccCCCCCCcccccCCCcccccCCCCCccccCCC
Q 045553 249 SSFGQLVNLEVLDLSRNFLSGIVPSELGMCKQLKVLVLRNDYGPLYSREHGDLPIQPVVDGGEDYNFFDGGLPDSITRLP 328 (1082)
Q Consensus 249 ~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~n~~~~~~~~~~~l~~~~~~~~~~~~n~~~~~~p~~l~~l~ 328 (1082)
..+++|+.|++++|++++ +|.. +++|+.|++++|.+.. +|. .++
T Consensus 178 ---~~~~~L~~L~Ls~N~l~~-l~~~---~~~L~~L~L~~N~l~~--------------------------l~~---~~~ 221 (622)
T 3g06_A 178 ---MLPSGLQELSVSDNQLAS-LPTL---PSELYKLWAYNNRLTS--------------------------LPA---LPS 221 (622)
T ss_dssp ---CCCTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSS--------------------------CCC---CCT
T ss_pred ---ccCCCCcEEECCCCCCCC-CCCc---cchhhEEECcCCcccc--------------------------cCC---CCC
Confidence 457899999999999985 4543 4789999999875432 232 247
Q ss_pred CCcEEEcCCCcccCCCCcccccccCCCeEEcCCccccCCCCccccCCCCCCEEecCCCcCcccCCCCcccCcccEEEecC
Q 045553 329 NLRVFWAPNLNLEGIFPQNWELCSKLEMLNLAHNFFTGQIPASLGNCKSLYFLDLSSNNLTGLLPEEVSVPCMAVFNVSQ 408 (1082)
Q Consensus 329 ~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~l~~L~~L~l~~ 408 (1082)
+|+.|++++|++.++. ..+++|+.|+|++|+|+ .+|. .+++|+.|+|++|+|+..++....+++|+.|++++
T Consensus 222 ~L~~L~Ls~N~L~~lp----~~l~~L~~L~Ls~N~L~-~lp~---~~~~L~~L~Ls~N~L~~lp~~l~~l~~L~~L~L~~ 293 (622)
T 3g06_A 222 GLKELIVSGNRLTSLP----VLPSELKELMVSGNRLT-SLPM---LPSGLLSLSVYRNQLTRLPESLIHLSSETTVNLEG 293 (622)
T ss_dssp TCCEEECCSSCCSCCC----CCCTTCCEEECCSSCCS-CCCC---CCTTCCEEECCSSCCCSCCGGGGGSCTTCEEECCS
T ss_pred CCCEEEccCCccCcCC----CCCCcCcEEECCCCCCC-cCCc---ccccCcEEeCCCCCCCcCCHHHhhccccCEEEecC
Confidence 8999999999999854 45689999999999999 5666 67899999999999995543334789999999999
Q ss_pred CcceecCCC
Q 045553 409 NLLSGEIPR 417 (1082)
Q Consensus 409 N~l~~~~~~ 417 (1082)
|++++.+|.
T Consensus 294 N~l~~~~~~ 302 (622)
T 3g06_A 294 NPLSERTLQ 302 (622)
T ss_dssp CCCCHHHHH
T ss_pred CCCCCcCHH
Confidence 999876553
No 312
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=99.94 E-value=8.5e-29 Score=303.57 Aligned_cols=398 Identities=15% Similarity=0.116 Sum_probs=240.7
Q ss_pred cCCCCCCEEEcccCCCcccCChhhcCC--CCCCEEeCcCCC-CCC-CCCccccCCCCCCeEEccCcccccc----cCccc
Q 045553 107 GDLTQLRVLLLAFNGFSGELPLEIGQL--SLLEILDLSFNS-FHG-PIPPTLQNCSSLRLINLSGNQFNGT----IPAFF 178 (1082)
Q Consensus 107 ~~l~~L~~L~L~~n~l~~~~p~~~~~l--~~L~~L~Ls~n~-l~~-~~p~~l~~l~~L~~L~Ls~N~l~~~----~p~~~ 178 (1082)
..+++|++|+|++|.+++..+..++.+ .+|++|+|++|. ++. .++..+.++++|++|+|++|.+++. ++..+
T Consensus 109 ~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~~~~~~l~~~~ 188 (592)
T 3ogk_B 109 NNLRQLKSVHFRRMIVSDLDLDRLAKARADDLETLKLDKCSGFTTDGLLSIVTHCRKIKTLLMEESSFSEKDGKWLHELA 188 (592)
T ss_dssp HHCTTCCEEEEESCBCCHHHHHHHHHHHGGGCCEEEEESCEEEEHHHHHHHHHHCTTCSEEECTTCEEECCCSHHHHHHH
T ss_pred hhCCCCCeEEeeccEecHHHHHHHHHhccccCcEEECcCCCCcCHHHHHHHHhhCCCCCEEECccccccCcchhHHHHHH
Confidence 389999999999999987777777764 459999999987 221 1233345899999999999998766 44456
Q ss_pred cCCCCCcEEEcccCcccc----cCCcccccccccccEEEcccCccCCCCCccccCCCCccEEEccCCcCC---CCcCccc
Q 045553 179 GQSPGFQVVSLSFNLLSG----SVPEEFGDNCVSLEHILLAANSLTGSIPPSLGNCTELRSLLLSSNMLQ---GDIPSSF 251 (1082)
Q Consensus 179 ~~l~~L~~L~L~~N~l~~----~~p~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~---~~~p~~~ 251 (1082)
..+++|++|+|++|.+++ .++.. ...+++|++|++++|.+.+ ++..+.++++|++|+++++... +..+..+
T Consensus 189 ~~~~~L~~L~L~~n~~~~~~~~~l~~~-~~~~~~L~~L~L~~~~~~~-l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~l 266 (592)
T 3ogk_B 189 QHNTSLEVLNFYMTEFAKISPKDLETI-ARNCRSLVSVKVGDFEILE-LVGFFKAAANLEEFCGGSLNEDIGMPEKYMNL 266 (592)
T ss_dssp HHCCCCCEEECTTCCCSSCCHHHHHHH-HHHCTTCCEEECSSCBGGG-GHHHHHHCTTCCEEEECBCCCCTTCTTSSSCC
T ss_pred hcCCCccEEEeeccCCCccCHHHHHHH-HhhCCCCcEEeccCccHHH-HHHHHhhhhHHHhhcccccccccchHHHHHHh
Confidence 678999999999998872 22222 2346777777777777774 5566777777777777653322 2334455
Q ss_pred cCCCCCCEEeCCCCcCcccCCccccCCCCCcEEEeccccCCcccccCCCCCCcccccCCCcccccCCC-CCccccCCCCC
Q 045553 252 GQLVNLEVLDLSRNFLSGIVPSELGMCKQLKVLVLRNDYGPLYSREHGDLPIQPVVDGGEDYNFFDGG-LPDSITRLPNL 330 (1082)
Q Consensus 252 ~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~n~~~~~~~~~~~l~~~~~~~~~~~~n~~~~~-~p~~l~~l~~L 330 (1082)
..+++|+.|+++++... .+|..+..+++|++|++++|.+ ++. ++..+..+++|
T Consensus 267 ~~~~~L~~L~l~~~~~~-~l~~~~~~~~~L~~L~Ls~~~l-------------------------~~~~~~~~~~~~~~L 320 (592)
T 3ogk_B 267 VFPRKLCRLGLSYMGPN-EMPILFPFAAQIRKLDLLYALL-------------------------ETEDHCTLIQKCPNL 320 (592)
T ss_dssp CCCTTCCEEEETTCCTT-TGGGGGGGGGGCCEEEETTCCC-------------------------CHHHHHHHHTTCTTC
T ss_pred hccccccccCccccchh-HHHHHHhhcCCCcEEecCCCcC-------------------------CHHHHHHHHHhCcCC
Confidence 66667777777665433 4566666666666666665421 111 11224555666
Q ss_pred cEEEcCCCcccC-CCCcccccccCCCeEEcC-----------CccccCCCCc-cccCCCCCCEEecCCCcCcccCCCCc-
Q 045553 331 RVFWAPNLNLEG-IFPQNWELCSKLEMLNLA-----------HNFFTGQIPA-SLGNCKSLYFLDLSSNNLTGLLPEEV- 396 (1082)
Q Consensus 331 ~~L~l~~n~l~~-~~~~~l~~l~~L~~L~Ls-----------~N~i~~~~p~-~~~~l~~L~~L~Ls~N~l~~~~p~~~- 396 (1082)
++|+++ +.+.. ..+..+..+++|++|+|+ .|.+++.... .+..+++|++|+++.|.+++..+..+
T Consensus 321 ~~L~L~-~~~~~~~l~~~~~~~~~L~~L~L~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~L~l~~~~l~~~~~~~l~ 399 (592)
T 3ogk_B 321 EVLETR-NVIGDRGLEVLAQYCKQLKRLRIERGADEQGMEDEEGLVSQRGLIALAQGCQELEYMAVYVSDITNESLESIG 399 (592)
T ss_dssp CEEEEE-GGGHHHHHHHHHHHCTTCCEEEEECCCCSSTTSSTTCCCCHHHHHHHHHHCTTCSEEEEEESCCCHHHHHHHH
T ss_pred CEEecc-CccCHHHHHHHHHhCCCCCEEEeecCccccccccccCccCHHHHHHHHhhCccCeEEEeecCCccHHHHHHHH
Confidence 666665 22222 222223445556666665 2344422111 12335555555555555554333222
Q ss_pred -ccCcccEEEecCCcceecCCCCCCcccccccccccccceeeeeecccccccccccCcCCCCCCCCCceeEeeccCCccc
Q 045553 397 -SVPCMAVFNVSQNLLSGEIPRISHSECSKMSVNWSMSQVDLIGFYTAFFYENALTSCAPFSSPSNGLFILHDFSNNLFT 475 (1082)
Q Consensus 397 -~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~n~~~ 475 (1082)
.+++|+.|+++++.
T Consensus 400 ~~~~~L~~L~l~~~~----------------------------------------------------------------- 414 (592)
T 3ogk_B 400 TYLKNLCDFRLVLLD----------------------------------------------------------------- 414 (592)
T ss_dssp HHCCSCCEEEEEECS-----------------------------------------------------------------
T ss_pred hhCCCCcEEEEeecC-----------------------------------------------------------------
Confidence 13344444443111
Q ss_pred CCCCCccccCCCccccccceeeeccCCCccccCCcccccccCCceeEEEccCCccccc-----CCccccccCCcccEEEc
Q 045553 476 GPVPPFLIDSDSLSSRPYYGFWLSGNSLKGNLSTYPFDLCLSLDGLIFDIGNNKLIGE-----VPSDMGSHCKCMKFLSM 550 (1082)
Q Consensus 476 g~~p~~~~~~~~l~~~~~~~~~~~~n~~~~~l~~~p~~~~~~~~l~~l~l~~n~l~~~-----ip~~~~~~~~~L~~L~L 550 (1082)
..|++++. ++ .++..+++|++|++
T Consensus 415 --------------------------------------------------~~n~l~~~p~~~~~~-~~~~~~~~L~~L~L 443 (592)
T 3ogk_B 415 --------------------------------------------------REERITDLPLDNGVR-SLLIGCKKLRRFAF 443 (592)
T ss_dssp --------------------------------------------------CCSCCSSCCCHHHHH-HHHHHCTTCCEEEE
T ss_pred --------------------------------------------------CCccccCchHHHHHH-HHHHhCCCCCEEEE
Confidence 02222210 11 11334566888888
Q ss_pred cCCc--ccccCccccC-CCCCCCEEEccCCCCCC-CCcccccCCCCCCEEEcCCCcCCcc-CchhhhcCcccchhhccCc
Q 045553 551 AGNE--FVGLIPQSFT-NFDSLRNLNLSRNHLQG-PLPSYINKMEDLKFLSLSLNNFTGA-IPWELTQLASLEVLELSAN 625 (1082)
Q Consensus 551 ~~N~--i~~~~~~~~~-~l~~L~~L~L~~N~l~~-~~p~~~~~l~~L~~L~Ls~N~l~~~-~p~~~~~l~~L~~L~Ls~N 625 (1082)
+.|. +++.....+. .+++|++|+|++|++++ .++..+..+++|++|+|++|.+++. ++..+..+++|++|+|++|
T Consensus 444 ~~~~~~l~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~ls~n 523 (592)
T 3ogk_B 444 YLRQGGLTDLGLSYIGQYSPNVRWMLLGYVGESDEGLMEFSRGCPNLQKLEMRGCCFSERAIAAAVTKLPSLRYLWVQGY 523 (592)
T ss_dssp ECCGGGCCHHHHHHHHHSCTTCCEEEECSCCSSHHHHHHHHTCCTTCCEEEEESCCCBHHHHHHHHHHCSSCCEEEEESC
T ss_pred ecCCCCccHHHHHHHHHhCccceEeeccCCCCCHHHHHHHHhcCcccCeeeccCCCCcHHHHHHHHHhcCccCeeECcCC
Confidence 7543 5544444333 37788888888888875 3445567788888888888888754 3444567888999999999
Q ss_pred ccCCCCCccc-cCCcccceecccCc
Q 045553 626 SLSGEIPSEF-SKLEHLNVLRLDHN 649 (1082)
Q Consensus 626 ~l~~~~p~~~-~~l~~L~~L~L~~N 649 (1082)
++++.-...+ ..++.|....+..+
T Consensus 524 ~it~~~~~~l~~~~p~l~~~~~~~~ 548 (592)
T 3ogk_B 524 RASMTGQDLMQMARPYWNIELIPSR 548 (592)
T ss_dssp BCCTTCTTGGGGCCTTEEEEEECCC
T ss_pred cCCHHHHHHHHHhCCCcEEEEecCc
Confidence 8876533333 35666666665554
No 313
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.94 E-value=6.2e-26 Score=250.49 Aligned_cols=107 Identities=19% Similarity=0.248 Sum_probs=77.7
Q ss_pred cCCcccEEEccCCcccccCccccCCCCCCCEEEccCCCCCCCCcccccCCCCCCEEEcCCCcCCccCchhhhcCcccchh
Q 045553 541 HCKCMKFLSMAGNEFVGLIPQSFTNFDSLRNLNLSRNHLQGPLPSYINKMEDLKFLSLSLNNFTGAIPWELTQLASLEVL 620 (1082)
Q Consensus 541 ~~~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 620 (1082)
.+++|++|++++|++++..|..|..+++|++|+|++|.+++..+..|..+++|++|+|++|.+....+.. .-...|+.+
T Consensus 175 ~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~~~~~-~~~~~l~~~ 253 (285)
T 1ozn_A 175 GLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWVCDCRAR-PLWAWLQKF 253 (285)
T ss_dssp TCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCHHHHTTCTTCCEEECCSSCEECSGGGH-HHHHHHHHC
T ss_pred CccccCEEECCCCcccccCHhHccCcccccEeeCCCCcCCcCCHHHcccCcccCEEeccCCCccCCCCcH-HHHHHHHhc
Confidence 3455788888888888888888888888999999999988777777888889999999999887543321 223456777
Q ss_pred hccCcccCCCCCccccC--CcccceecccC
Q 045553 621 ELSANSLSGEIPSEFSK--LEHLNVLRLDH 648 (1082)
Q Consensus 621 ~Ls~N~l~~~~p~~~~~--l~~L~~L~L~~ 648 (1082)
..+.|.+....|..+.+ +..++..++++
T Consensus 254 ~~~~~~~~c~~p~~l~g~~l~~l~~~~l~~ 283 (285)
T 1ozn_A 254 RGSSSEVPCSLPQRLAGRDLKRLAANDLQG 283 (285)
T ss_dssp CSEECCCBEEESGGGTTCBGGGSCGGGSCC
T ss_pred ccccCccccCCchHhCCcChhhcCHHHhcc
Confidence 77888888777776653 34444444443
No 314
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.94 E-value=2.2e-26 Score=254.08 Aligned_cols=172 Identities=22% Similarity=0.182 Sum_probs=103.4
Q ss_pred CEEEcccCCCcccCChhhcCCCCCCEEeCcCCCCCCCCCccccCCCCCCeEEccCcccccccCccccCCCCCcEEEcccC
Q 045553 113 RVLLLAFNGFSGELPLEIGQLSLLEILDLSFNSFHGPIPPTLQNCSSLRLINLSGNQFNGTIPAFFGQSPGFQVVSLSFN 192 (1082)
Q Consensus 113 ~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N 192 (1082)
++++.++++++ .+|..+ .++|++|+|++|.+++..+..|.++++|++|+|++|++++..|..|..+++|++|+|++|
T Consensus 14 ~~~~c~~~~l~-~ip~~~--~~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n 90 (285)
T 1ozn_A 14 VTTSCPQQGLQ-AVPVGI--PAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDN 90 (285)
T ss_dssp CEEECCSSCCS-SCCTTC--CTTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSC
T ss_pred eEEEcCcCCcc-cCCcCC--CCCceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCCCC
Confidence 45666666666 455433 356677777777766555556666777777777777666665666666666666666666
Q ss_pred c-ccccCCcccccccccccEEEcccCccCCCCCccccCCCCccEEEccCCcCCCCcCccccCCCCCCEEeCCCCcCcccC
Q 045553 193 L-LSGSVPEEFGDNCVSLEHILLAANSLTGSIPPSLGNCTELRSLLLSSNMLQGDIPSSFGQLVNLEVLDLSRNFLSGIV 271 (1082)
Q Consensus 193 ~-l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~ 271 (1082)
+ +. .++...+..+++|++|++++|++++..+..+.++++|++|++++|++++..+..|+.+++|++|++++|++++..
T Consensus 91 ~~l~-~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~ 169 (285)
T 1ozn_A 91 AQLR-SVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVP 169 (285)
T ss_dssp TTCC-CCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEEC
T ss_pred CCcc-ccCHHHhcCCcCCCEEECCCCcCCEECHhHhhCCcCCCEEECCCCcccccCHhHhccCCCccEEECCCCcccccC
Confidence 5 44 332222234566666666666666555556666666666666666666555555666666666666666666444
Q ss_pred CccccCCCCCcEEEecc
Q 045553 272 PSELGMCKQLKVLVLRN 288 (1082)
Q Consensus 272 p~~l~~l~~L~~L~l~~ 288 (1082)
+..+..+++|++|++++
T Consensus 170 ~~~~~~l~~L~~L~l~~ 186 (285)
T 1ozn_A 170 ERAFRGLHSLDRLLLHQ 186 (285)
T ss_dssp TTTTTTCTTCCEEECCS
T ss_pred HHHhcCccccCEEECCC
Confidence 44455555555554444
No 315
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.93 E-value=5.5e-25 Score=266.21 Aligned_cols=115 Identities=27% Similarity=0.379 Sum_probs=70.2
Q ss_pred CCCCEEEcccCCCcccCChhhcCCCCCCEEeCcCCCCCCCCCccccCCCCCCeEEccCcccccccCccccCCCCCcEEEc
Q 045553 110 TQLRVLLLAFNGFSGELPLEIGQLSLLEILDLSFNSFHGPIPPTLQNCSSLRLINLSGNQFNGTIPAFFGQSPGFQVVSL 189 (1082)
Q Consensus 110 ~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 189 (1082)
.+++.|++++|+++ .+|..+. ++|++|+|++|.|+ .+|. .+++|++|+|++|+|+ .+|. .+++|++|+|
T Consensus 40 ~~l~~L~ls~n~L~-~lp~~l~--~~L~~L~L~~N~l~-~lp~---~l~~L~~L~Ls~N~l~-~lp~---~l~~L~~L~L 108 (622)
T 3g06_A 40 NGNAVLNVGESGLT-TLPDCLP--AHITTLVIPDNNLT-SLPA---LPPELRTLEVSGNQLT-SLPV---LPPGLLELSI 108 (622)
T ss_dssp HCCCEEECCSSCCS-CCCSCCC--TTCSEEEECSCCCS-CCCC---CCTTCCEEEECSCCCS-CCCC---CCTTCCEEEE
T ss_pred CCCcEEEecCCCcC-ccChhhC--CCCcEEEecCCCCC-CCCC---cCCCCCEEEcCCCcCC-cCCC---CCCCCCEEEC
Confidence 35788888888887 6776655 67888888888877 5565 4677777777777776 3444 5566666666
Q ss_pred ccCcccccCCcccccccccccEEEcccCccCCCCCccccCCCCccEEEccCCcCC
Q 045553 190 SFNLLSGSVPEEFGDNCVSLEHILLAANSLTGSIPPSLGNCTELRSLLLSSNMLQ 244 (1082)
Q Consensus 190 ~~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 244 (1082)
++|+++ .+|. .+++|++|++++|++++ +|.. +++|++|+|++|+++
T Consensus 109 s~N~l~-~l~~----~l~~L~~L~L~~N~l~~-lp~~---l~~L~~L~Ls~N~l~ 154 (622)
T 3g06_A 109 FSNPLT-HLPA----LPSGLCKLWIFGNQLTS-LPVL---PPGLQELSVSDNQLA 154 (622)
T ss_dssp CSCCCC-CCCC----CCTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCS
T ss_pred cCCcCC-CCCC----CCCCcCEEECCCCCCCc-CCCC---CCCCCEEECcCCcCC
Confidence 666666 3333 23445555555555552 3322 244444444444444
No 316
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.93 E-value=1.7e-27 Score=266.50 Aligned_cols=232 Identities=21% Similarity=0.172 Sum_probs=178.9
Q ss_pred hhcCCCCCCEEeCcCCCCCCCCCccccCCCCCCeEEccCcccc-cccCcccc-------CCCCCcEEEcccCcccccCCc
Q 045553 129 EIGQLSLLEILDLSFNSFHGPIPPTLQNCSSLRLINLSGNQFN-GTIPAFFG-------QSPGFQVVSLSFNLLSGSVPE 200 (1082)
Q Consensus 129 ~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~-~~~p~~~~-------~l~~L~~L~L~~N~l~~~~p~ 200 (1082)
.++..++|++|++++|.+ .+|..+... |++|+|++|++. ..+|..+. ++++|++|+|++|++++.+|.
T Consensus 38 ~~~~~~~L~~l~l~~n~l--~~p~~~~~~--L~~L~L~~n~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~ 113 (312)
T 1wwl_A 38 LYGGGRSLEYLLKRVDTE--ADLGQFTDI--IKSLSLKRLTVRAARIPSRILFGALRVLGISGLQELTLENLEVTGTAPP 113 (312)
T ss_dssp EEEEEEECTTHHHHCCTT--CCCHHHHHH--HHHCCCCEEEEEEEECBHHHHHHHHHHHTTSCCCEEEEEEEBCBSCCCC
T ss_pred EEccCCCceeEeeccccc--ccHHHHHHH--HhhcccccccccCCCcCHHHHHHHHHhcCcCCccEEEccCCcccchhHH
Confidence 356677899999999999 688877655 999999999994 45666665 788999999999999888888
Q ss_pred ccc-cccccccEEEcccCccCCCCCccccCC-----CCccEEEccCCcCCCCcCccccCCCCCCEEeCCCCcCcccC--C
Q 045553 201 EFG-DNCVSLEHILLAANSLTGSIPPSLGNC-----TELRSLLLSSNMLQGDIPSSFGQLVNLEVLDLSRNFLSGIV--P 272 (1082)
Q Consensus 201 ~~~-~~l~~L~~L~L~~N~l~~~~~~~~~~l-----~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~--p 272 (1082)
.++ ..+++|++|+|++|++++. |..+..+ ++|++|+|++|++++..|..|+.+++|++|++++|++.+.. |
T Consensus 114 ~~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~ 192 (312)
T 1wwl_A 114 PLLEATGPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGERGLI 192 (312)
T ss_dssp CSSSCCSCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCSSCCEEECCSCTTCHHHHHH
T ss_pred HHHHhcCCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCCCCCEEECCCCCcCcchHHH
Confidence 763 5688888888888888866 7777666 78888888888888777788888888888888888876542 2
Q ss_pred ccccCCCCCcEEEeccccCCcccccCCCCCCcccccCCCcccccCCCCCccccCCCCCcEEEcCCCcccC---CCCcccc
Q 045553 273 SELGMCKQLKVLVLRNDYGPLYSREHGDLPIQPVVDGGEDYNFFDGGLPDSITRLPNLRVFWAPNLNLEG---IFPQNWE 349 (1082)
Q Consensus 273 ~~l~~l~~L~~L~l~~n~~~~~~~~~~~l~~~~~~~~~~~~n~~~~~~p~~l~~l~~L~~L~l~~n~l~~---~~~~~l~ 349 (1082)
..+ .+..+++|++|++++|.+.+ .....+.
T Consensus 193 ~~~-----------------------------------------------~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~ 225 (312)
T 1wwl_A 193 SAL-----------------------------------------------CPLKFPTLQVLALRNAGMETPSGVCSALAA 225 (312)
T ss_dssp HHS-----------------------------------------------CTTSCTTCCEEECTTSCCCCHHHHHHHHHH
T ss_pred HHH-----------------------------------------------HhccCCCCCEEECCCCcCcchHHHHHHHHh
Confidence 222 01344555566666666653 2223456
Q ss_pred cccCCCeEEcCCccccCCCC-ccccCCCCCCEEecCCCcCcccCCCCcccCcccEEEecCCcceec
Q 045553 350 LCSKLEMLNLAHNFFTGQIP-ASLGNCKSLYFLDLSSNNLTGLLPEEVSVPCMAVFNVSQNLLSGE 414 (1082)
Q Consensus 350 ~l~~L~~L~Ls~N~i~~~~p-~~~~~l~~L~~L~Ls~N~l~~~~p~~~~l~~L~~L~l~~N~l~~~ 414 (1082)
.+++|++|+|++|++++..| ..+..+++|+.|+|++|+|+ .+|..+. ++|+.|++++|+|++.
T Consensus 226 ~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~-~ip~~~~-~~L~~L~Ls~N~l~~~ 289 (312)
T 1wwl_A 226 ARVQLQGLDLSHNSLRDAAGAPSCDWPSQLNSLNLSFTGLK-QVPKGLP-AKLSVLDLSYNRLDRN 289 (312)
T ss_dssp TTCCCSEEECTTSCCCSSCCCSCCCCCTTCCEEECTTSCCS-SCCSSCC-SEEEEEECCSSCCCSC
T ss_pred cCCCCCEEECCCCcCCcccchhhhhhcCCCCEEECCCCccC-hhhhhcc-CCceEEECCCCCCCCC
Confidence 77999999999999998775 56677899999999999999 5565555 8999999999999876
No 317
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.93 E-value=3.2e-27 Score=264.92 Aligned_cols=258 Identities=20% Similarity=0.211 Sum_probs=139.1
Q ss_pred CCCCCccccccccccCCCCCCEEEcccCCCcccCChhhcCCCCCCEEeCcCCCCCCCCCccccCCCCCCeEEccCccccc
Q 045553 93 NSSDKLSGNLSRAIGDLTQLRVLLLAFNGFSGELPLEIGQLSLLEILDLSFNSFHGPIPPTLQNCSSLRLINLSGNQFNG 172 (1082)
Q Consensus 93 ~~~~~l~g~l~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~ 172 (1082)
.+.+.+...+...+..+++|++|+|++|++++..|..|..+++|++|+|++|.+++..+ +.++++|++|+|++|++++
T Consensus 17 ls~~~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~Ls~n~l~~ 94 (317)
T 3o53_A 17 VTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQE 94 (317)
T ss_dssp CCTTTHHHHHHHHHTTGGGCSEEECTTSCCCCCCHHHHTTCTTCCEEECTTSCCEEEEE--ETTCTTCCEEECCSSEEEE
T ss_pred ccccchhhhHHHHhccCCCCCEEECcCCccCcCCHHHhhCCCcCCEEECCCCcCCcchh--hhhcCCCCEEECcCCcccc
Confidence 33344444444444444555555555555554444555555555555555555553322 5555555555555555542
Q ss_pred ccCccccCCCCCcEEEcccCcccccCCcccccccccccEEEcccCccCCCCCccccCCCCccEEEccCCcCCCCcCcccc
Q 045553 173 TIPAFFGQSPGFQVVSLSFNLLSGSVPEEFGDNCVSLEHILLAANSLTGSIPPSLGNCTELRSLLLSSNMLQGDIPSSFG 252 (1082)
Q Consensus 173 ~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~ 252 (1082)
.. ..++|++|++++|++++..+. .+++|++|++++|++++..+..+..+++|++|+|++|.+++..+..+.
T Consensus 95 l~-----~~~~L~~L~l~~n~l~~~~~~----~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~ 165 (317)
T 3o53_A 95 LL-----VGPSIETLHAANNNISRVSCS----RGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELA 165 (317)
T ss_dssp EE-----ECTTCCEEECCSSCCSEEEEC----CCSSCEEEECCSSCCCSGGGBCTGGGSSEEEEECTTSCCCEEEGGGGG
T ss_pred cc-----CCCCcCEEECCCCccCCcCcc----ccCCCCEEECCCCCCCCccchhhhccCCCCEEECCCCCCCcccHHHHh
Confidence 21 124555555555555422211 123444445555544444444444444444444444444443333332
Q ss_pred -CCCCCCEEeCCCCcCcccCCccccCCCCCcEEEeccccCCcccccCCCCCCcccccCCCcccccCCCCCccccCCCCCc
Q 045553 253 -QLVNLEVLDLSRNFLSGIVPSELGMCKQLKVLVLRNDYGPLYSREHGDLPIQPVVDGGEDYNFFDGGLPDSITRLPNLR 331 (1082)
Q Consensus 253 -~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~n~~~~~~~~~~~l~~~~~~~~~~~~n~~~~~~p~~l~~l~~L~ 331 (1082)
.+++|++|+|++|++++. + ....+++|+
T Consensus 166 ~~l~~L~~L~L~~N~l~~~-~--------------------------------------------------~~~~l~~L~ 194 (317)
T 3o53_A 166 ASSDTLEHLNLQYNFIYDV-K--------------------------------------------------GQVVFAKLK 194 (317)
T ss_dssp GGTTTCCEEECTTSCCCEE-E--------------------------------------------------CCCCCTTCC
T ss_pred hccCcCCEEECCCCcCccc-c--------------------------------------------------cccccccCC
Confidence 344444444444444422 1 112356677
Q ss_pred EEEcCCCcccCCCCcccccccCCCeEEcCCccccCCCCccccCCCCCCEEecCCCcCc-ccCCCCc-ccCcccEEEecCC
Q 045553 332 VFWAPNLNLEGIFPQNWELCSKLEMLNLAHNFFTGQIPASLGNCKSLYFLDLSSNNLT-GLLPEEV-SVPCMAVFNVSQN 409 (1082)
Q Consensus 332 ~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~-~~~p~~~-~l~~L~~L~l~~N 409 (1082)
+|++++|++.++.+. +..+++|++|+|++|+|+ .+|..+..+++|+.|+|++|+++ +.+|..+ .++.|+.+++++|
T Consensus 195 ~L~Ls~N~l~~l~~~-~~~l~~L~~L~L~~N~l~-~l~~~~~~l~~L~~L~l~~N~~~~~~~~~~~~~~~~L~~l~l~~~ 272 (317)
T 3o53_A 195 TLDLSSNKLAFMGPE-FQSAAGVTWISLRNNKLV-LIEKALRFSQNLEHFDLRGNGFHCGTLRDFFSKNQRVQTVAKQTV 272 (317)
T ss_dssp EEECCSSCCCEECGG-GGGGTTCSEEECTTSCCC-EECTTCCCCTTCCEEECTTCCCBHHHHHHHHHTCHHHHHHHHHHH
T ss_pred EEECCCCcCCcchhh-hcccCcccEEECcCCccc-chhhHhhcCCCCCEEEccCCCccCcCHHHHHhccccceEEECCCc
Confidence 777777777765443 777788888888888887 56777788888888888888887 4444444 4677777777733
Q ss_pred -cceec
Q 045553 410 -LLSGE 414 (1082)
Q Consensus 410 -~l~~~ 414 (1082)
.+.|.
T Consensus 273 ~~l~~~ 278 (317)
T 3o53_A 273 KKLTGQ 278 (317)
T ss_dssp HHHHSS
T ss_pred hhccCC
Confidence 34443
No 318
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.93 E-value=4.3e-27 Score=263.85 Aligned_cols=244 Identities=21% Similarity=0.182 Sum_probs=187.9
Q ss_pred cccCCCCCCccccccccccCCCCCCEEEcccCCCcccCChhhcCCCCCCEEeCcCCCCCCCCCccccCCCCCCeEEccCc
Q 045553 89 NINSNSSDKLSGNLSRAIGDLTQLRVLLLAFNGFSGELPLEIGQLSLLEILDLSFNSFHGPIPPTLQNCSSLRLINLSGN 168 (1082)
Q Consensus 89 ~~~~~~~~~l~g~l~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N 168 (1082)
...+.+.+++.+..|..|.++++|++|+|++|.+++..| +..+++|++|+|++|.+++ ++ ..++|++|++++|
T Consensus 37 ~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~Ls~n~l~~-l~----~~~~L~~L~l~~n 109 (317)
T 3o53_A 37 KELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQE-LL----VGPSIETLHAANN 109 (317)
T ss_dssp SEEECTTSCCCCCCHHHHTTCTTCCEEECTTSCCEEEEE--ETTCTTCCEEECCSSEEEE-EE----ECTTCCEEECCSS
T ss_pred CEEECcCCccCcCCHHHhhCCCcCCEEECCCCcCCcchh--hhhcCCCCEEECcCCcccc-cc----CCCCcCEEECCCC
Confidence 344566788999888999999999999999999996655 9999999999999999984 33 4489999999999
Q ss_pred ccccccCccccCCCCCcEEEcccCcccccCCcccccccccccEEEcccCccCCCCCcccc-CCCCccEEEccCCcCCCCc
Q 045553 169 QFNGTIPAFFGQSPGFQVVSLSFNLLSGSVPEEFGDNCVSLEHILLAANSLTGSIPPSLG-NCTELRSLLLSSNMLQGDI 247 (1082)
Q Consensus 169 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~~~~~~-~l~~L~~L~L~~N~l~~~~ 247 (1082)
++++..+.. +++|++|++++|++++..+..+ ..+++|++|++++|++++..+..+. .+++|++|+|++|.+++.
T Consensus 110 ~l~~~~~~~---~~~L~~L~l~~N~l~~~~~~~~-~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~- 184 (317)
T 3o53_A 110 NISRVSCSR---GQGKKNIYLANNKITMLRDLDE-GCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDV- 184 (317)
T ss_dssp CCSEEEECC---CSSCEEEECCSSCCCSGGGBCT-GGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEE-
T ss_pred ccCCcCccc---cCCCCEEECCCCCCCCccchhh-hccCCCCEEECCCCCCCcccHHHHhhccCcCCEEECCCCcCccc-
Confidence 999765543 6889999999999995444454 4689999999999999987777774 789999999999999854
Q ss_pred CccccCCCCCCEEeCCCCcCcccCCccccCCCCCcEEEeccccCCcccccCCCCCCcccccCCCcccccCCCCCccccCC
Q 045553 248 PSSFGQLVNLEVLDLSRNFLSGIVPSELGMCKQLKVLVLRNDYGPLYSREHGDLPIQPVVDGGEDYNFFDGGLPDSITRL 327 (1082)
Q Consensus 248 p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~n~~~~~~~~~~~l~~~~~~~~~~~~n~~~~~~p~~l~~l 327 (1082)
+. ...+++|++|+|++|++++. |..+..+++|++|++++|.
T Consensus 185 ~~-~~~l~~L~~L~Ls~N~l~~l-~~~~~~l~~L~~L~L~~N~------------------------------------- 225 (317)
T 3o53_A 185 KG-QVVFAKLKTLDLSSNKLAFM-GPEFQSAAGVTWISLRNNK------------------------------------- 225 (317)
T ss_dssp EC-CCCCTTCCEEECCSSCCCEE-CGGGGGGTTCSEEECTTSC-------------------------------------
T ss_pred cc-ccccccCCEEECCCCcCCcc-hhhhcccCcccEEECcCCc-------------------------------------
Confidence 33 34589999999999999854 4447777777777776643
Q ss_pred CCCcEEEcCCCcccCCCCcccccccCCCeEEcCCcccc-CCCCccccCCCCCCEEecCCC-cCcccCCCCc
Q 045553 328 PNLRVFWAPNLNLEGIFPQNWELCSKLEMLNLAHNFFT-GQIPASLGNCKSLYFLDLSSN-NLTGLLPEEV 396 (1082)
Q Consensus 328 ~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~N~i~-~~~p~~~~~l~~L~~L~Ls~N-~l~~~~p~~~ 396 (1082)
+.. +|..+..+++|+.|+|++|.+. +.+|..+..+++|+.|++++| .+++..|...
T Consensus 226 ------------l~~-l~~~~~~l~~L~~L~l~~N~~~~~~~~~~~~~~~~L~~l~l~~~~~l~~~~~~~~ 283 (317)
T 3o53_A 226 ------------LVL-IEKALRFSQNLEHFDLRGNGFHCGTLRDFFSKNQRVQTVAKQTVKKLTGQNEEEC 283 (317)
T ss_dssp ------------CCE-ECTTCCCCTTCCEEECTTCCCBHHHHHHHHHTCHHHHHHHHHHHHHHHSSSSCCC
T ss_pred ------------ccc-hhhHhhcCCCCCEEEccCCCccCcCHHHHHhccccceEEECCCchhccCCchhcc
Confidence 332 2334455566667777777766 556666777777777777733 4555555444
No 319
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.93 E-value=7.4e-27 Score=280.94 Aligned_cols=185 Identities=19% Similarity=0.145 Sum_probs=131.4
Q ss_pred eecccCceEEEEE-EEcCCeEEEEEEeecCc----------cccHHHHHHHHHHHhcc-CCCceeeEeeeeccCCeEEEE
Q 045553 808 CIGSGGFGATYKA-EIIPGVVVAVKRLSVGR----------FQGVQQFAAEIRTLGRV-QHPNLVTLIGYHVSEAEMFLI 875 (1082)
Q Consensus 808 ~lg~G~~g~Vy~a-~~~~~~~vavK~~~~~~----------~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lV 875 (1082)
..+.|+.|.+..+ +...|+.||||.+.... ....++|.+|+++|+++ .|+||++++++++++...|||
T Consensus 241 ~~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~yLV 320 (569)
T 4azs_A 241 QPYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSGWLV 320 (569)
T ss_dssp C-C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEEEEE
T ss_pred ccccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEEEEE
Confidence 3566777766665 34458999999997542 12346799999999999 699999999999999999999
Q ss_pred EeecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCCC
Q 045553 876 YNYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGTS 955 (1082)
Q Consensus 876 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~ 955 (1082)
|||++|++|.+++... ..++.. +|+.||+.||+|+|++ +||||||||+|||+++++++||+|||+|+.....
T Consensus 321 MEyv~G~~L~d~i~~~--~~l~~~---~I~~QIl~AL~ylH~~---GIIHRDIKPeNILL~~dg~vKL~DFGlAr~~~~~ 392 (569)
T 4azs_A 321 MEKLPGRLLSDMLAAG--EEIDRE---KILGSLLRSLAALEKQ---GFWHDDVRPWNVMVDARQHARLIDFGSIVTTPQD 392 (569)
T ss_dssp EECCCSEEHHHHHHTT--CCCCHH---HHHHHHHHHHHHHHHT---TCEESCCCGGGEEECTTSCEEECCCTTEESCC--
T ss_pred EecCCCCcHHHHHHhC--CCCCHH---HHHHHHHHHHHHHHHC---CceeccCchHhEEECCCCCEEEeecccCeeCCCC
Confidence 9999999999999874 356644 5889999999999999 9999999999999999999999999999876543
Q ss_pred CCccccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHhCCCC
Q 045553 956 ETHATTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELISDKKA 1002 (1082)
Q Consensus 956 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~elltg~~p 1002 (1082)
.. .....+||+.|+|||++.+ .+..++|+||+|++++++.++..+
T Consensus 393 ~~-~~~t~vGTp~YmAPE~l~g-~~~~~~d~~s~g~~~~~l~~~~~~ 437 (569)
T 4azs_A 393 CS-WPTNLVQSFFVFVNELFAE-NKSWNGFWRSAPVHPFNLPQPWSN 437 (569)
T ss_dssp -C-CSHHHHHHHHHHHHHHC------------------CCCCTTHHH
T ss_pred Cc-cccCceechhhccHHHhCC-CCCCcccccccccchhhhccccch
Confidence 32 2344679999999999876 466789999999998877665443
No 320
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.92 E-value=1.2e-24 Score=238.13 Aligned_cols=216 Identities=23% Similarity=0.254 Sum_probs=182.5
Q ss_pred CCCceeeeeEeeCCCCCeeeeecCCCccccccccCCCCCCCCCCCCcccCcCcccccccccCcccCCCCCCccccccccc
Q 045553 27 TDSCSWHGVTCDPLSGRVTSLNLSSNLSRTSCSLLSLPPAAGPGGNFSFHFPCLQLHQHDRGNINSNSSDKLSGNLSRAI 106 (1082)
Q Consensus 27 ~~~c~w~gv~C~~~~~~v~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~l~~~l 106 (1082)
.|+|.|.|+.|.-. +.++.++++++ ++. .+|..+
T Consensus 2 ~~~C~~~~~~C~c~-~~~~~l~~~~~--------------------------------------------~l~-~ip~~~ 35 (270)
T 2o6q_A 2 EALCKKDGGVCSCN-NNKNSVDCSSK--------------------------------------------KLT-AIPSNI 35 (270)
T ss_dssp CCCBGGGTCSBEEE-TTTTEEECTTS--------------------------------------------CCS-SCCSCC
T ss_pred CccCCCCCCCCEeC-CCCCEEEccCC--------------------------------------------CCC-ccCCCC
Confidence 58999999999642 34567777653 222 234333
Q ss_pred cCCCCCCEEEcccCCCcccCChhhcCCCCCCEEeCcCCCCCCCCCccccCCCCCCeEEccCcccccccCccccCCCCCcE
Q 045553 107 GDLTQLRVLLLAFNGFSGELPLEIGQLSLLEILDLSFNSFHGPIPPTLQNCSSLRLINLSGNQFNGTIPAFFGQSPGFQV 186 (1082)
Q Consensus 107 ~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 186 (1082)
. ++|++|+|++|++++..+..|+.+++|++|+|++|.++...+..|.++++|++|+|++|++++..+..|..+++|++
T Consensus 36 ~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~ 113 (270)
T 2o6q_A 36 P--ADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLETLWVTDNKLQALPIGVFDQLVNLAE 113 (270)
T ss_dssp C--TTCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSCCCTTTTSSCTTCCEEECCSSCCCCCCTTTTTTCSSCCE
T ss_pred C--CCCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCeeChhhhcCCCCCCEEECCCCcCCcCCHhHcccccCCCE
Confidence 3 57999999999999777778999999999999999999655666789999999999999999877788899999999
Q ss_pred EEcccCcccccCCcccccccccccEEEcccCccCCCCCccccCCCCccEEEccCCcCCCCcCccccCCCCCCEEeCCCCc
Q 045553 187 VSLSFNLLSGSVPEEFGDNCVSLEHILLAANSLTGSIPPSLGNCTELRSLLLSSNMLQGDIPSSFGQLVNLEVLDLSRNF 266 (1082)
Q Consensus 187 L~L~~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 266 (1082)
|+|++|+++ .++...+..+++|++|+|++|++++..+..|..+++|++|+|++|++++..+..|..+++|++|+|++|+
T Consensus 114 L~l~~n~l~-~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~ 192 (270)
T 2o6q_A 114 LRLDRNQLK-SLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKLTSLKELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQ 192 (270)
T ss_dssp EECCSSCCC-CCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSC
T ss_pred EECCCCccC-eeCHHHhCcCcCCCEEECCCCcCCccCHhHccCCcccceeEecCCcCcEeChhHhccCCCcCEEECCCCc
Confidence 999999999 4555544579999999999999997766778999999999999999998777889999999999999999
Q ss_pred CcccCCccccCCCCCcEEEeccccC
Q 045553 267 LSGIVPSELGMCKQLKVLVLRNDYG 291 (1082)
Q Consensus 267 l~~~~p~~l~~l~~L~~L~l~~n~~ 291 (1082)
+++..+..|..+++|+.|++++|.+
T Consensus 193 l~~~~~~~~~~l~~L~~L~l~~N~~ 217 (270)
T 2o6q_A 193 LKRVPEGAFDSLEKLKMLQLQENPW 217 (270)
T ss_dssp CSCCCTTTTTTCTTCCEEECCSSCB
T ss_pred CCcCCHHHhccccCCCEEEecCCCe
Confidence 9987777899999999999999854
No 321
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.92 E-value=1.4e-25 Score=266.30 Aligned_cols=247 Identities=20% Similarity=0.208 Sum_probs=171.1
Q ss_pred CccccccccccCCCCCCEEEcccCCCcccCChhhcCCCCCCEEeCcCCCCCCCCCccccCCCCCCeEEccCcccccccCc
Q 045553 97 KLSGNLSRAIGDLTQLRVLLLAFNGFSGELPLEIGQLSLLEILDLSFNSFHGPIPPTLQNCSSLRLINLSGNQFNGTIPA 176 (1082)
Q Consensus 97 ~l~g~l~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~ 176 (1082)
.+...+......+++|++|+|++|.+++..|..|+.+++|++|+|++|.+++..| +..+++|++|+|++|.|++..+
T Consensus 21 ~l~~~l~~l~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~l~~- 97 (487)
T 3oja_A 21 SLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELLV- 97 (487)
T ss_dssp THHHHHHTTSTTGGGCCEEECCSSCCCCCCGGGGTTCTTCCEEECTTSCCEEEEE--CTTCTTCCEEECCSSEEEEEEE-
T ss_pred hhHHHHHHhcccCCCccEEEeeCCcCCCCCHHHHhCCCCCCEEEeeCCCCCCCcc--cccCCCCCEEEecCCcCCCCCC-
Confidence 3333333333344478888888888887777788888888888888888886554 8888888888888888874332
Q ss_pred cccCCCCCcEEEcccCcccccCCcccccccccccEEEcccCccCCCCCccccCCCCccEEEccCCcCCCCcCcccc-CCC
Q 045553 177 FFGQSPGFQVVSLSFNLLSGSVPEEFGDNCVSLEHILLAANSLTGSIPPSLGNCTELRSLLLSSNMLQGDIPSSFG-QLV 255 (1082)
Q Consensus 177 ~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~-~l~ 255 (1082)
.++|+.|+|++|.+++..+. .+++|++|+|++|++++..|..++.+++|+.|+|++|.+++..|..+. .++
T Consensus 98 ----~~~L~~L~L~~N~l~~~~~~----~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~ 169 (487)
T 3oja_A 98 ----GPSIETLHAANNNISRVSCS----RGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSD 169 (487)
T ss_dssp ----CTTCCEEECCSSCCCCEEEC----CCSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEGGGGGGGTT
T ss_pred ----CCCcCEEECcCCcCCCCCcc----ccCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcChHHHhhhCC
Confidence 27788888888887744332 246677777777777776676777777777777777777766666665 577
Q ss_pred CCCEEeCCCCcCcccCCccccCCCCCcEEEeccccCCcccccCCCCCCcccccCCCcccccCCCCCccccCCCCCcEEEc
Q 045553 256 NLEVLDLSRNFLSGIVPSELGMCKQLKVLVLRNDYGPLYSREHGDLPIQPVVDGGEDYNFFDGGLPDSITRLPNLRVFWA 335 (1082)
Q Consensus 256 ~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~n~~~~~~~~~~~l~~~~~~~~~~~~n~~~~~~p~~l~~l~~L~~L~l 335 (1082)
+|++|+|++|.+++. |. + ..+++|+.|++
T Consensus 170 ~L~~L~Ls~N~l~~~-~~-~-------------------------------------------------~~l~~L~~L~L 198 (487)
T 3oja_A 170 TLEHLNLQYNFIYDV-KG-Q-------------------------------------------------VVFAKLKTLDL 198 (487)
T ss_dssp TCCEEECTTSCCCEE-EC-C-------------------------------------------------CCCTTCCEEEC
T ss_pred cccEEecCCCccccc-cc-c-------------------------------------------------ccCCCCCEEEC
Confidence 777777777777643 11 1 12455666666
Q ss_pred CCCcccCCCCcccccccCCCeEEcCCccccCCCCccccCCCCCCEEecCCCcCc-ccCCCCc-ccCcccEEEec
Q 045553 336 PNLNLEGIFPQNWELCSKLEMLNLAHNFFTGQIPASLGNCKSLYFLDLSSNNLT-GLLPEEV-SVPCMAVFNVS 407 (1082)
Q Consensus 336 ~~n~l~~~~~~~l~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~-~~~p~~~-~l~~L~~L~l~ 407 (1082)
++|.+.++.+. +..+++|+.|+|++|+|+ .+|..+..+++|+.|+|++|++. +.+|..+ .++.|+.++++
T Consensus 199 s~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~-~lp~~l~~l~~L~~L~l~~N~l~c~~~~~~~~~l~~L~~l~~~ 270 (487)
T 3oja_A 199 SSNKLAFMGPE-FQSAAGVTWISLRNNKLV-LIEKALRFSQNLEHFDLRGNGFHCGTLRDFFSKNQRVQTVAKQ 270 (487)
T ss_dssp CSSCCCEECGG-GGGGTTCSEEECTTSCCC-EECTTCCCCTTCCEEECTTCCBCHHHHHHHHTTCHHHHHHHHH
T ss_pred CCCCCCCCCHh-HcCCCCccEEEecCCcCc-ccchhhccCCCCCEEEcCCCCCcCcchHHHHHhCCCCcEEecc
Confidence 66666665443 777788888888888888 46777788888888888888887 4344333 45666666665
No 322
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.92 E-value=2.7e-25 Score=263.81 Aligned_cols=225 Identities=18% Similarity=0.165 Sum_probs=173.6
Q ss_pred CChhhcCCC----CCCEEeCcCCCCCCCCCccccCCCCCCeEEccCcccccccCccccCCCCCcEEEcccCcccccCCcc
Q 045553 126 LPLEIGQLS----LLEILDLSFNSFHGPIPPTLQNCSSLRLINLSGNQFNGTIPAFFGQSPGFQVVSLSFNLLSGSVPEE 201 (1082)
Q Consensus 126 ~p~~~~~l~----~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~ 201 (1082)
+|..+..+. +|++|+|++|.+++..|..|.++++|++|+|++|.+++..| |..+++|++|+|++|.++ .+|.
T Consensus 22 l~~~l~~l~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~-~l~~- 97 (487)
T 3oja_A 22 LKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQ-ELLV- 97 (487)
T ss_dssp HHHHHHTTSTTGGGCCEEECCSSCCCCCCGGGGTTCTTCCEEECTTSCCEEEEE--CTTCTTCCEEECCSSEEE-EEEE-
T ss_pred hHHHHHHhcccCCCccEEEeeCCcCCCCCHHHHhCCCCCCEEEeeCCCCCCCcc--cccCCCCCEEEecCCcCC-CCCC-
Confidence 455555444 89999999999998778889999999999999999987665 888999999999999888 3331
Q ss_pred cccccccccEEEcccCccCCCCCccccCCCCccEEEccCCcCCCCcCccccCCCCCCEEeCCCCcCcccCCccccCCCCC
Q 045553 202 FGDNCVSLEHILLAANSLTGSIPPSLGNCTELRSLLLSSNMLQGDIPSSFGQLVNLEVLDLSRNFLSGIVPSELGMCKQL 281 (1082)
Q Consensus 202 ~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L 281 (1082)
.++|++|++++|.+++..+. .+++|+.|+|++|.+++..|..|+.+++|++|+|++|.+++..|..+.
T Consensus 98 ----~~~L~~L~L~~N~l~~~~~~---~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~----- 165 (487)
T 3oja_A 98 ----GPSIETLHAANNNISRVSCS---RGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELA----- 165 (487)
T ss_dssp ----CTTCCEEECCSSCCCCEEEC---CCSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEGGGGG-----
T ss_pred ----CCCcCEEECcCCcCCCCCcc---ccCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcChHHHh-----
Confidence 36788888888888765443 346777888888888777777777777777777777777766555543
Q ss_pred cEEEeccccCCcccccCCCCCCcccccCCCcccccCCCCCccccCCCCCcEEEcCCCcccCCCCcccccccCCCeEEcCC
Q 045553 282 KVLVLRNDYGPLYSREHGDLPIQPVVDGGEDYNFFDGGLPDSITRLPNLRVFWAPNLNLEGIFPQNWELCSKLEMLNLAH 361 (1082)
Q Consensus 282 ~~L~l~~n~~~~~~~~~~~l~~~~~~~~~~~~n~~~~~~p~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~ 361 (1082)
..+++|+.|++++|.+.+..+ +..+++|++|+|++
T Consensus 166 -------------------------------------------~~l~~L~~L~Ls~N~l~~~~~--~~~l~~L~~L~Ls~ 200 (487)
T 3oja_A 166 -------------------------------------------ASSDTLEHLNLQYNFIYDVKG--QVVFAKLKTLDLSS 200 (487)
T ss_dssp -------------------------------------------GGTTTCCEEECTTSCCCEEEC--CCCCTTCCEEECCS
T ss_pred -------------------------------------------hhCCcccEEecCCCccccccc--cccCCCCCEEECCC
Confidence 134455555555566655532 33589999999999
Q ss_pred ccccCCCCccccCCCCCCEEecCCCcCcccCCCCcccCcccEEEecCCcce
Q 045553 362 NFFTGQIPASLGNCKSLYFLDLSSNNLTGLLPEEVSVPCMAVFNVSQNLLS 412 (1082)
Q Consensus 362 N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~l~~L~~L~l~~N~l~ 412 (1082)
|+|++ +|..+..+++|+.|+|++|+|++.++....+++|+.|++++|++.
T Consensus 201 N~l~~-~~~~~~~l~~L~~L~Ls~N~l~~lp~~l~~l~~L~~L~l~~N~l~ 250 (487)
T 3oja_A 201 NKLAF-MGPEFQSAAGVTWISLRNNKLVLIEKALRFSQNLEHFDLRGNGFH 250 (487)
T ss_dssp SCCCE-ECGGGGGGTTCSEEECTTSCCCEECTTCCCCTTCCEEECTTCCBC
T ss_pred CCCCC-CCHhHcCCCCccEEEecCCcCcccchhhccCCCCCEEEcCCCCCc
Confidence 99995 555699999999999999999986655557899999999999997
No 323
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.91 E-value=5.2e-24 Score=232.92 Aligned_cols=156 Identities=26% Similarity=0.365 Sum_probs=129.8
Q ss_pred EEEccCCcccccCCccccccCCcccEEEccCCcccccCccccCCCCCCCEEEccCCCCCCCCcccccCCCCCCEEEcCCC
Q 045553 522 IFDIGNNKLIGEVPSDMGSHCKCMKFLSMAGNEFVGLIPQSFTNFDSLRNLNLSRNHLQGPLPSYINKMEDLKFLSLSLN 601 (1082)
Q Consensus 522 ~l~l~~n~l~~~ip~~~~~~~~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N 601 (1082)
+|++++|++. .+|..+|..+++|++|++++|+|+++.+..|..+++|++|+|++|++++..+..|..+++|++|+|++|
T Consensus 65 ~L~l~~n~l~-~i~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n 143 (270)
T 2o6q_A 65 LLYLNDNKLQ-TLPAGIFKELKNLETLWVTDNKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYN 143 (270)
T ss_dssp EEECCSSCCS-CCCTTTTSSCTTCCEEECCSSCCCCCCTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred EEECCCCccC-eeChhhhcCCCCCCEEECCCCcCCcCCHhHcccccCCCEEECCCCccCeeCHHHhCcCcCCCEEECCCC
Confidence 3444444433 455555566677899999999998888888899999999999999999888888999999999999999
Q ss_pred cCCccCchhhhcCcccchhhccCcccCCCCCccccCCcccceecccCcccCCCCCCCCCCCCcccEEeccCCccccC
Q 045553 602 NFTGAIPWELTQLASLEVLELSANSLSGEIPSEFSKLEHLNVLRLDHNNLTGRIPPGFGTRSSLSIFDVSFNNLSGS 678 (1082)
Q Consensus 602 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~l~ls~N~l~~~ 678 (1082)
++++..+..|..+++|++|+|++|+|++..+..|..+++|++|+|++|+|++..+..|..+++|+.|++++|++.+.
T Consensus 144 ~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~ 220 (270)
T 2o6q_A 144 ELQSLPKGVFDKLTSLKELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQLKRVPEGAFDSLEKLKMLQLQENPWDCT 220 (270)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCS
T ss_pred cCCccCHhHccCCcccceeEecCCcCcEeChhHhccCCCcCEEECCCCcCCcCCHHHhccccCCCEEEecCCCeeCC
Confidence 99977777789999999999999999977777899999999999999999977777789999999999976665533
No 324
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=99.91 E-value=1.6e-27 Score=292.36 Aligned_cols=411 Identities=16% Similarity=0.081 Sum_probs=214.6
Q ss_pred CCCCCeEEccCcccccccCcccc-CCCCCcEEEcccC-cccccCCcccccccccccEEEcccCccCCCCCccc----cCC
Q 045553 157 CSSLRLINLSGNQFNGTIPAFFG-QSPGFQVVSLSFN-LLSGSVPEEFGDNCVSLEHILLAANSLTGSIPPSL----GNC 230 (1082)
Q Consensus 157 l~~L~~L~Ls~N~l~~~~p~~~~-~l~~L~~L~L~~N-~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~~~~~----~~l 230 (1082)
+++|++|+|++|.+++..+..+. .+++|++|+|++| .++......+...+++|++|+|++|.+++..+..+ ..+
T Consensus 104 ~~~L~~L~L~~~~~~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~ 183 (594)
T 2p1m_B 104 YTWLEEIRLKRMVVTDDCLELIAKSFKNFKVLVLSSCEGFSTDGLAAIAATCRNLKELDLRESDVDDVSGHWLSHFPDTY 183 (594)
T ss_dssp CTTCCEEEEESCBCCHHHHHHHHHHCTTCCEEEEESCEEEEHHHHHHHHHHCTTCCEEECTTCEEECCCGGGGGGSCTTC
T ss_pred CCCCCeEEeeCcEEcHHHHHHHHHhCCCCcEEeCCCcCCCCHHHHHHHHHhCCCCCEEeCcCCccCCcchHHHHHHhhcC
Confidence 34444444444444433333332 3444444444444 22211111222234444444444444443332222 244
Q ss_pred CCccEEEccCCc--CCC-CcCccccCCCCCCEEeCCCC-cCcccCCccccCCCCCcEEEeccccCCcccccCCCCCCccc
Q 045553 231 TELRSLLLSSNM--LQG-DIPSSFGQLVNLEVLDLSRN-FLSGIVPSELGMCKQLKVLVLRNDYGPLYSREHGDLPIQPV 306 (1082)
Q Consensus 231 ~~L~~L~L~~N~--l~~-~~p~~~~~l~~L~~L~Ls~N-~l~~~~p~~l~~l~~L~~L~l~~n~~~~~~~~~~~l~~~~~ 306 (1082)
++|++|++++|. +.. .++..+..+++|++|++++| .+. .+|..+..+++|+.|+++.+...
T Consensus 184 ~~L~~L~l~~~~~~~~~~~l~~l~~~~~~L~~L~L~~~~~~~-~l~~~~~~~~~L~~L~l~~~~~~-------------- 248 (594)
T 2p1m_B 184 TSLVSLNISCLASEVSFSALERLVTRCPNLKSLKLNRAVPLE-KLATLLQRAPQLEELGTGGYTAE-------------- 248 (594)
T ss_dssp CCCCEEECTTCCSCCCHHHHHHHHHHCTTCCEEECCTTSCHH-HHHHHHHHCTTCSEEECSBCCCC--------------
T ss_pred CcCcEEEecccCCcCCHHHHHHHHHhCCCCcEEecCCCCcHH-HHHHHHhcCCcceEcccccccCc--------------
Confidence 566666666665 211 11122234566777777766 333 35666666677777766543110
Q ss_pred ccCCCcccccCCCCCccccCCCCCcEE-EcCCCcccCCCCcccccccCCCeEEcCCccccCCCCc-cccCCCCCCEEecC
Q 045553 307 VDGGEDYNFFDGGLPDSITRLPNLRVF-WAPNLNLEGIFPQNWELCSKLEMLNLAHNFFTGQIPA-SLGNCKSLYFLDLS 384 (1082)
Q Consensus 307 ~~~~~~~n~~~~~~p~~l~~l~~L~~L-~l~~n~l~~~~~~~l~~l~~L~~L~Ls~N~i~~~~p~-~~~~l~~L~~L~Ls 384 (1082)
...+.+.+ ++..+.++++|+.| .+.+... ...+..+..+++|++|+|++|.+++.... .+..+++|+.|+++
T Consensus 249 ----~~~~~~~~-l~~~l~~~~~L~~Ls~~~~~~~-~~l~~~~~~~~~L~~L~L~~~~l~~~~l~~~~~~~~~L~~L~l~ 322 (594)
T 2p1m_B 249 ----VRPDVYSG-LSVALSGCKELRCLSGFWDAVP-AYLPAVYSVCSRLTTLNLSYATVQSYDLVKLLCQCPKLQRLWVL 322 (594)
T ss_dssp ----CCHHHHHH-HHHHHHTCTTCCEEECCBTCCG-GGGGGGHHHHTTCCEEECTTCCCCHHHHHHHHTTCTTCCEEEEE
T ss_pred ----cchhhHHH-HHHHHhcCCCcccccCCcccch-hhHHHHHHhhCCCCEEEccCCCCCHHHHHHHHhcCCCcCEEeCc
Confidence 01122222 33456667777776 3332221 22344445677888888888886643322 35577888888888
Q ss_pred CCcCcccC-CCCc-ccCcccEEEecCCcceecCCCCCCcccccccccccccceeeeeecccccccccccCcCCCCCCCCC
Q 045553 385 SNNLTGLL-PEEV-SVPCMAVFNVSQNLLSGEIPRISHSECSKMSVNWSMSQVDLIGFYTAFFYENALTSCAPFSSPSNG 462 (1082)
Q Consensus 385 ~N~l~~~~-p~~~-~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 462 (1082)
+| ++... +... .+++|+.|+++++.-.| ...|
T Consensus 323 ~~-~~~~~l~~l~~~~~~L~~L~L~~~~~~g------~~~~--------------------------------------- 356 (594)
T 2p1m_B 323 DY-IEDAGLEVLASTCKDLRELRVFPSEPFV------MEPN--------------------------------------- 356 (594)
T ss_dssp GG-GHHHHHHHHHHHCTTCCEEEEECSCTTC------SSCS---------------------------------------
T ss_pred Cc-cCHHHHHHHHHhCCCCCEEEEecCcccc------cccC---------------------------------------
Confidence 77 43221 1111 25677777775532110 0000
Q ss_pred ceeEeeccCCcccCCCCCccccCCCccccccceeeeccCCCccccCCcccccccCCceeEEEccCCcccccCCccccccC
Q 045553 463 LFILHDFSNNLFTGPVPPFLIDSDSLSSRPYYGFWLSGNSLKGNLSTYPFDLCLSLDGLIFDIGNNKLIGEVPSDMGSHC 542 (1082)
Q Consensus 463 ~~~~~~l~~n~~~g~~p~~~~~~~~l~~~~~~~~~~~~n~~~~~l~~~p~~~~~~~~l~~l~l~~n~l~~~ip~~~~~~~ 542 (1082)
+.+++. .+......+.+|+.|+++.|++.+..+..+...+
T Consensus 357 ---------~~l~~~-------------------------------~l~~l~~~~~~L~~L~~~~~~l~~~~~~~l~~~~ 396 (594)
T 2p1m_B 357 ---------VALTEQ-------------------------------GLVSVSMGCPKLESVLYFCRQMTNAALITIARNR 396 (594)
T ss_dssp ---------SCCCHH-------------------------------HHHHHHHHCTTCCEEEEEESCCCHHHHHHHHHHC
T ss_pred ---------CCCCHH-------------------------------HHHHHHHhchhHHHHHHhcCCcCHHHHHHHHhhC
Confidence 000000 0000000123455666666776655555555556
Q ss_pred CcccEEEcc--C----CcccccC-----ccccCCCCCCCEEEccCCCCCCCCcccccC-CCCCCEEEcCCCcCCccCchh
Q 045553 543 KCMKFLSMA--G----NEFVGLI-----PQSFTNFDSLRNLNLSRNHLQGPLPSYINK-MEDLKFLSLSLNNFTGAIPWE 610 (1082)
Q Consensus 543 ~~L~~L~L~--~----N~i~~~~-----~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~-l~~L~~L~Ls~N~l~~~~p~~ 610 (1082)
++|+.|+++ + |.++... +..+..+++|+.|+|++ .+++..+..+.. +++|+.|+|++|.+++..+..
T Consensus 397 ~~L~~L~L~~~~~~~~~~l~~~~~~~~~~~l~~~~~~L~~L~L~~-~l~~~~~~~l~~~~~~L~~L~L~~~~i~~~~~~~ 475 (594)
T 2p1m_B 397 PNMTRFRLCIIEPKAPDYLTLEPLDIGFGAIVEHCKDLRRLSLSG-LLTDKVFEYIGTYAKKMEMLSVAFAGDSDLGMHH 475 (594)
T ss_dssp TTCCEEEEEESSTTCCCTTTCCCTHHHHHHHHHHCTTCCEEECCS-SCCHHHHHHHHHHCTTCCEEEEESCCSSHHHHHH
T ss_pred CCcceeEeecccCCCcccccCCchhhHHHHHHhhCCCccEEeecC-cccHHHHHHHHHhchhccEeeccCCCCcHHHHHH
Confidence 778888888 4 5555221 22356677888888876 565444444544 778888888888887655555
Q ss_pred h-hcCcccchhhccCcccCCCCCc-cccCCcccceecccCcccCCCCCCCC-CCCCcccEEeccCCcc
Q 045553 611 L-TQLASLEVLELSANSLSGEIPS-EFSKLEHLNVLRLDHNNLTGRIPPGF-GTRSSLSIFDVSFNNL 675 (1082)
Q Consensus 611 ~-~~l~~L~~L~Ls~N~l~~~~p~-~~~~l~~L~~L~L~~N~l~~~~p~~~-~~l~~L~~l~ls~N~l 675 (1082)
+ ..+++|++|+|++|.+++.... ....+++|+.|+|++|+++......+ ..++.|+...+..+.-
T Consensus 476 l~~~~~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~l~~~lp~l~i~~~~~~~~ 543 (594)
T 2p1m_B 476 VLSGCDSLRKLEIRDCPFGDKALLANASKLETMRSLWMSSCSVSFGACKLLGQKMPKLNVEVIDERGA 543 (594)
T ss_dssp HHHHCTTCCEEEEESCSCCHHHHHHTGGGGGGSSEEEEESSCCBHHHHHHHHHHCTTEEEEEECSSSC
T ss_pred HHhcCCCcCEEECcCCCCcHHHHHHHHHhCCCCCEEeeeCCCCCHHHHHHHHHhCCCCEEEEecCCCc
Confidence 5 6678888888888888543333 33457888888888888753222223 3456666666655543
No 325
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.91 E-value=2.9e-24 Score=237.07 Aligned_cols=147 Identities=27% Similarity=0.305 Sum_probs=115.3
Q ss_pred CcccEEEccCCcccccCccccCCCCCCCEEEccCCCCCCCCcccccCCCCCCEEEcCCCcCCccCchhhhcCcccchhhc
Q 045553 543 KCMKFLSMAGNEFVGLIPQSFTNFDSLRNLNLSRNHLQGPLPSYINKMEDLKFLSLSLNNFTGAIPWELTQLASLEVLEL 622 (1082)
Q Consensus 543 ~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 622 (1082)
++|++|+|++|+|+ .+|..+..+++|++|+|++|+|++..|..|..+++|++|+|++|+|++..+..|..+++|+.|+|
T Consensus 77 ~~L~~L~Ls~N~l~-~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L 155 (290)
T 1p9a_G 77 PVLGTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSL 155 (290)
T ss_dssp TTCCEEECCSSCCS-SCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CcCCEEECCCCcCC-cCchhhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEECCCCCCCccChhhcccccCCCEEEC
Confidence 34677777777776 44667778888888888888888777788888888888888888888777777888888899999
Q ss_pred cCcccCCCCCccccCCcccceecccCcccCCCCCCCCCCCCcccEEeccCCccccCCCCCcccccccCCCCCCCCCCCCC
Q 045553 623 SANSLSGEIPSEFSKLEHLNVLRLDHNNLTGRIPPGFGTRSSLSIFDVSFNNLSGSAPRNSLIKCENVQGNPNLQLCHTD 702 (1082)
Q Consensus 623 s~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~l~ls~N~l~~~~p~~~~~~~~~~~~Np~~c~c~~~ 702 (1082)
++|+|++..+..|..+++|+.|+|++|+|+ .+|..+..+.+|+.|+|+ +|||.|+|+ .
T Consensus 156 ~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~-~ip~~~~~~~~L~~l~L~--------------------~Np~~C~c~-~ 213 (290)
T 1p9a_G 156 ANNNLTELPAGLLNGLENLDTLLLQENSLY-TIPKGFFGSHLLPFAFLH--------------------GNPWLCNCE-I 213 (290)
T ss_dssp TTSCCSCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCCCSEEECC--------------------SCCBCCSGG-G
T ss_pred CCCcCCccCHHHhcCcCCCCEEECCCCcCC-ccChhhcccccCCeEEeC--------------------CCCccCcCc-c
Confidence 999988666667788999999999999998 677777788888888875 455667775 4
Q ss_pred CCCCcccccC
Q 045553 703 PSSSEWERQH 712 (1082)
Q Consensus 703 ~~~~~~~~~~ 712 (1082)
.+...|..++
T Consensus 214 ~~l~~wl~~~ 223 (290)
T 1p9a_G 214 LYFRRWLQDN 223 (290)
T ss_dssp HHHHHHHHHT
T ss_pred HHHHHHHHhC
Confidence 4555665544
No 326
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.91 E-value=8.8e-24 Score=232.04 Aligned_cols=139 Identities=25% Similarity=0.307 Sum_probs=118.5
Q ss_pred cCCcccEEEccCCcccccCccccCCCCCCCEEEccCCCCCCC-CcccccCCCCCCEEEcCCCcCCccCchhhhcCcccc-
Q 045553 541 HCKCMKFLSMAGNEFVGLIPQSFTNFDSLRNLNLSRNHLQGP-LPSYINKMEDLKFLSLSLNNFTGAIPWELTQLASLE- 618 (1082)
Q Consensus 541 ~~~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~-~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~- 618 (1082)
.+++|++|++++|++++..+..|..+++|++|+|++|.+++. +|..|..+++|++|+|++|++++..+..|..+++|+
T Consensus 98 ~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~ 177 (276)
T 2z62_A 98 GLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPL 177 (276)
T ss_dssp TCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTT
T ss_pred CCccccEEECCCCCccccCchhcccCCCCCEEECcCCccceecCchhhccCCCCCEEECCCCCCCcCCHHHhhhhhhccc
Confidence 445688888888888888777899999999999999999864 588999999999999999999988888888888888
Q ss_pred ---hhhccCcccCCCCCccccCCcccceecccCcccCCCCCCCCCCCCcccEEeccCCccccCCC
Q 045553 619 ---VLELSANSLSGEIPSEFSKLEHLNVLRLDHNNLTGRIPPGFGTRSSLSIFDVSFNNLSGSAP 680 (1082)
Q Consensus 619 ---~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~l~ls~N~l~~~~p 680 (1082)
.|++++|++++..+..+. ..+|+.|+|++|++++..+..|..+++|+.|++++|+++|.+|
T Consensus 178 l~l~L~ls~n~l~~~~~~~~~-~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~ 241 (276)
T 2z62_A 178 LNLSLDLSLNPMNFIQPGAFK-EIRLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 241 (276)
T ss_dssp CCEEEECCSSCCCEECTTSSC-SCCEEEEECCSSCCSCCCTTTTTTCCSCCEEECCSSCBCCCTT
T ss_pred cceeeecCCCcccccCccccC-CCcccEEECCCCceeecCHhHhcccccccEEEccCCcccccCC
Confidence 889999999966665554 4589999999999998777778999999999998888775544
No 327
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.91 E-value=1.2e-23 Score=230.97 Aligned_cols=210 Identities=22% Similarity=0.239 Sum_probs=110.7
Q ss_pred CCCEEeCcCCCCCCCCCccccCCCCCCeEEccCcccccccCccccCCCCCcEEEcccCcccccCCcccccccccccEEEc
Q 045553 135 LLEILDLSFNSFHGPIPPTLQNCSSLRLINLSGNQFNGTIPAFFGQSPGFQVVSLSFNLLSGSVPEEFGDNCVSLEHILL 214 (1082)
Q Consensus 135 ~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~L 214 (1082)
+|++|+|++|.+++..+..|.++++|++|+|++|++++..+..|..+++|++|+|++|++++..+..+ ..+++|++|++
T Consensus 29 ~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~-~~l~~L~~L~l 107 (276)
T 2z62_A 29 STKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAF-SGLSSLQKLVA 107 (276)
T ss_dssp TCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTT-TTCTTCCEEEC
T ss_pred CccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCccChhhh-cCCccccEEEC
Confidence 45555555555554444455555555555555555554444455555555555555555542222222 23455555555
Q ss_pred ccCccCCCCCccccCCCCccEEEccCCcCCCC-cCccccCCCCCCEEeCCCCcCcccCCccccCCCCCcEEEeccccCCc
Q 045553 215 AANSLTGSIPPSLGNCTELRSLLLSSNMLQGD-IPSSFGQLVNLEVLDLSRNFLSGIVPSELGMCKQLKVLVLRNDYGPL 293 (1082)
Q Consensus 215 ~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~-~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~n~~~~ 293 (1082)
++|++++..+..+.++++|++|++++|++++. +|..|+.+++|++|++++|++++..+..+..+++|+.|.+
T Consensus 108 ~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~l~l------- 180 (276)
T 2z62_A 108 VETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNL------- 180 (276)
T ss_dssp TTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCE-------
T ss_pred CCCCccccCchhcccCCCCCEEECcCCccceecCchhhccCCCCCEEECCCCCCCcCCHHHhhhhhhccccce-------
Confidence 55555544444566666777777777776642 4666777777777777777776555444444433331100
Q ss_pred ccccCCCCCCcccccCCCcccccCCCCCccccCCCCCcEEEcCCCcccCCCCcccccccCCCeEEcCCccccCCCCcccc
Q 045553 294 YSREHGDLPIQPVVDGGEDYNFFDGGLPDSITRLPNLRVFWAPNLNLEGIFPQNWELCSKLEMLNLAHNFFTGQIPASLG 373 (1082)
Q Consensus 294 ~~~~~~~l~~~~~~~~~~~~n~~~~~~p~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~N~i~~~~p~~~~ 373 (1082)
.|++++|.+.++.+..+.. .+|++|+|++|++++..+..|.
T Consensus 181 --------------------------------------~L~ls~n~l~~~~~~~~~~-~~L~~L~L~~n~l~~~~~~~~~ 221 (276)
T 2z62_A 181 --------------------------------------SLDLSLNPMNFIQPGAFKE-IRLKELALDTNQLKSVPDGIFD 221 (276)
T ss_dssp --------------------------------------EEECCSSCCCEECTTSSCS-CCEEEEECCSSCCSCCCTTTTT
T ss_pred --------------------------------------eeecCCCcccccCccccCC-CcccEEECCCCceeecCHhHhc
Confidence 2333334444333333322 2566666666666644444455
Q ss_pred CCCCCCEEecCCCcCccc
Q 045553 374 NCKSLYFLDLSSNNLTGL 391 (1082)
Q Consensus 374 ~l~~L~~L~Ls~N~l~~~ 391 (1082)
.+++|+.|+|++|++++.
T Consensus 222 ~l~~L~~L~l~~N~~~c~ 239 (276)
T 2z62_A 222 RLTSLQKIWLHTNPWDCS 239 (276)
T ss_dssp TCCSCCEEECCSSCBCCC
T ss_pred ccccccEEEccCCccccc
Confidence 666666666666666543
No 328
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=99.90 E-value=4.9e-27 Score=288.07 Aligned_cols=378 Identities=15% Similarity=0.133 Sum_probs=261.4
Q ss_pred ccccCCCCCcEEEcccCcccccCCcccccccccccEEEcccC-ccCCC-CCccccCCCCccEEEccCCcCCCCcCcccc-
Q 045553 176 AFFGQSPGFQVVSLSFNLLSGSVPEEFGDNCVSLEHILLAAN-SLTGS-IPPSLGNCTELRSLLLSSNMLQGDIPSSFG- 252 (1082)
Q Consensus 176 ~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~L~~N-~l~~~-~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~- 252 (1082)
..+..+++|++|+|++|.+++..+..+...+++|++|+|++| .++.. ++..+.++++|++|+|++|.+++..+..+.
T Consensus 99 ~l~~~~~~L~~L~L~~~~~~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~i~~~~~~~l~~ 178 (594)
T 2p1m_B 99 AMSSSYTWLEEIRLKRMVVTDDCLELIAKSFKNFKVLVLSSCEGFSTDGLAAIAATCRNLKELDLRESDVDDVSGHWLSH 178 (594)
T ss_dssp HHHHHCTTCCEEEEESCBCCHHHHHHHHHHCTTCCEEEEESCEEEEHHHHHHHHHHCTTCCEEECTTCEEECCCGGGGGG
T ss_pred HHHHhCCCCCeEEeeCcEEcHHHHHHHHHhCCCCcEEeCCCcCCCCHHHHHHHHHhCCCCCEEeCcCCccCCcchHHHHH
Confidence 334568899999999999887777777656889999999999 55532 333445789999999999998765554443
Q ss_pred ---CCCCCCEEeCCCCc--Ccc-cCCccccCCCCCcEEEeccccCCcccccCCCCCCcccccCCCcccccCCCCCccccC
Q 045553 253 ---QLVNLEVLDLSRNF--LSG-IVPSELGMCKQLKVLVLRNDYGPLYSREHGDLPIQPVVDGGEDYNFFDGGLPDSITR 326 (1082)
Q Consensus 253 ---~l~~L~~L~Ls~N~--l~~-~~p~~l~~l~~L~~L~l~~n~~~~~~~~~~~l~~~~~~~~~~~~n~~~~~~p~~l~~ 326 (1082)
.+++|++|++++|. +.. .++..+..+++|++|++++|. .+.+ +|..+..
T Consensus 179 ~~~~~~~L~~L~l~~~~~~~~~~~l~~l~~~~~~L~~L~L~~~~------------------------~~~~-l~~~~~~ 233 (594)
T 2p1m_B 179 FPDTYTSLVSLNISCLASEVSFSALERLVTRCPNLKSLKLNRAV------------------------PLEK-LATLLQR 233 (594)
T ss_dssp SCTTCCCCCEEECTTCCSCCCHHHHHHHHHHCTTCCEEECCTTS------------------------CHHH-HHHHHHH
T ss_pred HhhcCCcCcEEEecccCCcCCHHHHHHHHHhCCCCcEEecCCCC------------------------cHHH-HHHHHhc
Confidence 66799999999987 321 122233456899999997751 1222 6667778
Q ss_pred CCCCcEEEcCCCc-------ccCCCCcccccccCCCeE-EcCCccccCCCCccccCCCCCCEEecCCCcCcccCCCC--c
Q 045553 327 LPNLRVFWAPNLN-------LEGIFPQNWELCSKLEML-NLAHNFFTGQIPASLGNCKSLYFLDLSSNNLTGLLPEE--V 396 (1082)
Q Consensus 327 l~~L~~L~l~~n~-------l~~~~~~~l~~l~~L~~L-~Ls~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~--~ 396 (1082)
+++|+.|.+..+. +.+ .+..+.++++|+.| .+.+.... .++..+..+++|+.|+|++|.+++..... .
T Consensus 234 ~~~L~~L~l~~~~~~~~~~~~~~-l~~~l~~~~~L~~Ls~~~~~~~~-~l~~~~~~~~~L~~L~L~~~~l~~~~l~~~~~ 311 (594)
T 2p1m_B 234 APQLEELGTGGYTAEVRPDVYSG-LSVALSGCKELRCLSGFWDAVPA-YLPAVYSVCSRLTTLNLSYATVQSYDLVKLLC 311 (594)
T ss_dssp CTTCSEEECSBCCCCCCHHHHHH-HHHHHHTCTTCCEEECCBTCCGG-GGGGGHHHHTTCCEEECTTCCCCHHHHHHHHT
T ss_pred CCcceEcccccccCccchhhHHH-HHHHHhcCCCcccccCCcccchh-hHHHHHHhhCCCCEEEccCCCCCHHHHHHHHh
Confidence 8888888865543 233 23356778888888 45443332 45555556788888888888876543222 1
Q ss_pred ccCcccEEEecCCcceecCCCCCCcccccccccccccceeeeeecccccccccccCcCCCCCCCCCceeEeeccCCcccC
Q 045553 397 SVPCMAVFNVSQNLLSGEIPRISHSECSKMSVNWSMSQVDLIGFYTAFFYENALTSCAPFSSPSNGLFILHDFSNNLFTG 476 (1082)
Q Consensus 397 ~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~n~~~g 476 (1082)
.+++|+.|++++| +....
T Consensus 312 ~~~~L~~L~l~~~-~~~~~------------------------------------------------------------- 329 (594)
T 2p1m_B 312 QCPKLQRLWVLDY-IEDAG------------------------------------------------------------- 329 (594)
T ss_dssp TCTTCCEEEEEGG-GHHHH-------------------------------------------------------------
T ss_pred cCCCcCEEeCcCc-cCHHH-------------------------------------------------------------
Confidence 4677888888776 32100
Q ss_pred CCCCccccCCCccccccceeeeccCCCccccCCcccccccCCceeEEEc---------cCCcccccCCccccccCCcccE
Q 045553 477 PVPPFLIDSDSLSSRPYYGFWLSGNSLKGNLSTYPFDLCLSLDGLIFDI---------GNNKLIGEVPSDMGSHCKCMKF 547 (1082)
Q Consensus 477 ~~p~~~~~~~~l~~~~~~~~~~~~n~~~~~l~~~p~~~~~~~~l~~l~l---------~~n~l~~~ip~~~~~~~~~L~~ 547 (1082)
++.....+.+|++|++ +.+.+.+.-...+...+++|++
T Consensus 330 ---------------------------------l~~l~~~~~~L~~L~L~~~~~~g~~~~~~l~~~~l~~l~~~~~~L~~ 376 (594)
T 2p1m_B 330 ---------------------------------LEVLASTCKDLRELRVFPSEPFVMEPNVALTEQGLVSVSMGCPKLES 376 (594)
T ss_dssp ---------------------------------HHHHHHHCTTCCEEEEECSCTTCSSCSSCCCHHHHHHHHHHCTTCCE
T ss_pred ---------------------------------HHHHHHhCCCCCEEEEecCcccccccCCCCCHHHHHHHHHhchhHHH
Confidence 0000011234456666 3344443333334455788999
Q ss_pred EEccCCcccccCccccC-CCCCCCEEEcc--C----CCCCCCC-----cccccCCCCCCEEEcCCCcCCccCchhhhc-C
Q 045553 548 LSMAGNEFVGLIPQSFT-NFDSLRNLNLS--R----NHLQGPL-----PSYINKMEDLKFLSLSLNNFTGAIPWELTQ-L 614 (1082)
Q Consensus 548 L~L~~N~i~~~~~~~~~-~l~~L~~L~L~--~----N~l~~~~-----p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~-l 614 (1082)
|.++.|++++.....+. .+++|+.|+|+ + |.+++.. +..+..+++|+.|+|++ .+++..+..+.. +
T Consensus 377 L~~~~~~l~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~~~l~~~~~~L~~L~L~~-~l~~~~~~~l~~~~ 455 (594)
T 2p1m_B 377 VLYFCRQMTNAALITIARNRPNMTRFRLCIIEPKAPDYLTLEPLDIGFGAIVEHCKDLRRLSLSG-LLTDKVFEYIGTYA 455 (594)
T ss_dssp EEEEESCCCHHHHHHHHHHCTTCCEEEEEESSTTCCCTTTCCCTHHHHHHHHHHCTTCCEEECCS-SCCHHHHHHHHHHC
T ss_pred HHHhcCCcCHHHHHHHHhhCCCcceeEeecccCCCcccccCCchhhHHHHHHhhCCCccEEeecC-cccHHHHHHHHHhc
Confidence 99999999876666665 58999999999 4 6666322 12367789999999988 777666666665 8
Q ss_pred cccchhhccCcccCCCCCccc-cCCcccceecccCcccCCCCCC-CCCCCCcccEEeccCCccc
Q 045553 615 ASLEVLELSANSLSGEIPSEF-SKLEHLNVLRLDHNNLTGRIPP-GFGTRSSLSIFDVSFNNLS 676 (1082)
Q Consensus 615 ~~L~~L~Ls~N~l~~~~p~~~-~~l~~L~~L~L~~N~l~~~~p~-~~~~l~~L~~l~ls~N~l~ 676 (1082)
++|+.|+|++|.+++..+..+ ..+++|+.|+|++|++++.... .+..+++|+.|++++|+++
T Consensus 456 ~~L~~L~L~~~~i~~~~~~~l~~~~~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~l~~~~~~ 519 (594)
T 2p1m_B 456 KKMEMLSVAFAGDSDLGMHHVLSGCDSLRKLEIRDCPFGDKALLANASKLETMRSLWMSSCSVS 519 (594)
T ss_dssp TTCCEEEEESCCSSHHHHHHHHHHCTTCCEEEEESCSCCHHHHHHTGGGGGGSSEEEEESSCCB
T ss_pred hhccEeeccCCCCcHHHHHHHHhcCCCcCEEECcCCCCcHHHHHHHHHhCCCCCEEeeeCCCCC
Confidence 999999999999986555454 6789999999999999754443 3456899999999999885
No 329
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=99.89 E-value=4e-24 Score=255.70 Aligned_cols=185 Identities=20% Similarity=0.252 Sum_probs=147.1
Q ss_pred cccceecccCceEEEEEEEcCCeEEEEEEeecCccc--------cHHHHHHHHHHHhccCCCceeeEeeeeccCCeEEEE
Q 045553 804 NVQNCIGSGGFGATYKAEIIPGVVVAVKRLSVGRFQ--------GVQQFAAEIRTLGRVQHPNLVTLIGYHVSEAEMFLI 875 (1082)
Q Consensus 804 ~~~~~lg~G~~g~Vy~a~~~~~~~vavK~~~~~~~~--------~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV 875 (1082)
...++||+|+||.||+|+. .++.+|+|+....... ..+.+.+|++++++++||||+++..++...+..++|
T Consensus 339 ~~~~~LG~G~fg~Vy~~~~-~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lV 417 (540)
T 3en9_A 339 IPEHLIGKGAEADIKRDSY-LDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLDNKRIM 417 (540)
T ss_dssp ---------CCEEEEEEEC-SSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETTTTEEE
T ss_pred CCCCEEeeCCCEEEEEEEE-CCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCCccEEE
Confidence 4467899999999999954 4788999987543221 134589999999999999999666666677778999
Q ss_pred EeecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCCC
Q 045553 876 YNYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGTS 955 (1082)
Q Consensus 876 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~ 955 (1082)
|||+++++|.++++. +..++.|+++||+|||+. +|+||||||+||+++. .+||+|||+++.....
T Consensus 418 mE~~~ggsL~~~l~~----------~~~i~~qi~~aL~~LH~~---gIiHrDiKp~NILl~~--~~kL~DFGla~~~~~~ 482 (540)
T 3en9_A 418 MSYINGKLAKDVIED----------NLDIAYKIGEIVGKLHKN---DVIHNDLTTSNFIFDK--DLYIIDFGLGKISNLD 482 (540)
T ss_dssp EECCCSEEHHHHSTT----------CTHHHHHHHHHHHHHHHT---TEECTTCCTTSEEESS--SEEECCCTTCEECCCH
T ss_pred EECCCCCCHHHHHHH----------HHHHHHHHHHHHHHHHHC---cCccCCCCHHHEEECC--eEEEEECccCEECCCc
Confidence 999999999999875 558999999999999999 9999999999999999 9999999999987543
Q ss_pred CCcc------ccCcccCCCcccchhccc--CCCCchhhHHHHHHHHHHHHhCCCCCC
Q 045553 956 ETHA------TTDVAGTFGYVAPEYAMT--CRVSDKADVYSFGVVLLELISDKKALD 1004 (1082)
Q Consensus 956 ~~~~------~~~~~gt~~y~aPE~~~~--~~~~~~~Dv~slGvll~elltg~~p~~ 1004 (1082)
.... .....||+.|+|||++.. ..|+...|+|+...-..+-+.++.+|.
T Consensus 483 ~~~~~~~~~~~~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~~v~~r~rY~ 539 (540)
T 3en9_A 483 EDKAVDLIVFKKAVLSTHHEKFDEIWERFLEGYKSVYDRWEIILELMKDVERRARYV 539 (540)
T ss_dssp HHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHTCSCCC
T ss_pred cccccchhhhhhhhcCCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhccccC
Confidence 3221 235679999999999987 667888999999998888888877663
No 330
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.89 E-value=2.9e-22 Score=220.95 Aligned_cols=203 Identities=21% Similarity=0.170 Sum_probs=115.4
Q ss_pred hcCCCCCCEEeCcCCCCCCCCCccccCCCCCCeEEccCcccccccCccccCCCCCcEEEcccCcccccCCcccccccccc
Q 045553 130 IGQLSLLEILDLSFNSFHGPIPPTLQNCSSLRLINLSGNQFNGTIPAFFGQSPGFQVVSLSFNLLSGSVPEEFGDNCVSL 209 (1082)
Q Consensus 130 ~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L 209 (1082)
++++++|+++++++|.++ .+|..+. ++|++|+|++|++++..+..|..+++|++|+|++|+++ .++.. ..+++|
T Consensus 6 ~~~l~~l~~l~~~~~~l~-~ip~~~~--~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~-~~~~~--~~l~~L 79 (290)
T 1p9a_G 6 VSKVASHLEVNCDKRNLT-ALPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELT-KLQVD--GTLPVL 79 (290)
T ss_dssp EECSTTCCEEECTTSCCS-SCCSCCC--TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCC-EEECC--SCCTTC
T ss_pred ccccCCccEEECCCCCCC-cCCCCCC--CCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccC-cccCC--CCCCcC
Confidence 444555555555555555 4444332 45555566665555555555555555555555555555 22222 234555
Q ss_pred cEEEcccCccCCCCCccccCCCCccEEEccCCcCCCCcCccccCCCCCCEEeCCCCcCcccCCccccCCCCCcEEEeccc
Q 045553 210 EHILLAANSLTGSIPPSLGNCTELRSLLLSSNMLQGDIPSSFGQLVNLEVLDLSRNFLSGIVPSELGMCKQLKVLVLRND 289 (1082)
Q Consensus 210 ~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~n 289 (1082)
++|+|++|+++ .+|..+..+++|++|+|++|++++..+..|..+++|++|+|++|++++..+..|..
T Consensus 80 ~~L~Ls~N~l~-~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~------------ 146 (290)
T 1p9a_G 80 GTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTP------------ 146 (290)
T ss_dssp CEEECCSSCCS-SCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTT------------
T ss_pred CEEECCCCcCC-cCchhhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEECCCCCCCccChhhccc------------
Confidence 55555555555 45555666666666666666666555566666666666666666666443333333
Q ss_pred cCCcccccCCCCCCcccccCCCcccccCCCCCccccCCCCCcEEEcCCCcccCCCCcccccccCCCeEEcCCccccCCCC
Q 045553 290 YGPLYSREHGDLPIQPVVDGGEDYNFFDGGLPDSITRLPNLRVFWAPNLNLEGIFPQNWELCSKLEMLNLAHNFFTGQIP 369 (1082)
Q Consensus 290 ~~~~~~~~~~~l~~~~~~~~~~~~n~~~~~~p~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~N~i~~~~p 369 (1082)
+++|+.|++++|++..+.+..|..+++|++|+|++|+|+ .+|
T Consensus 147 -------------------------------------l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~-~ip 188 (290)
T 1p9a_G 147 -------------------------------------TPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSLY-TIP 188 (290)
T ss_dssp -------------------------------------CTTCCEEECTTSCCSCCCTTTTTTCTTCCEEECCSSCCC-CCC
T ss_pred -------------------------------------ccCCCEEECCCCcCCccCHHHhcCcCCCCEEECCCCcCC-ccC
Confidence 333344444444444444445556666777777777776 566
Q ss_pred ccccCCCCCCEEecCCCcCc
Q 045553 370 ASLGNCKSLYFLDLSSNNLT 389 (1082)
Q Consensus 370 ~~~~~l~~L~~L~Ls~N~l~ 389 (1082)
..+..+++|+.|+|++|++.
T Consensus 189 ~~~~~~~~L~~l~L~~Np~~ 208 (290)
T 1p9a_G 189 KGFFGSHLLPFAFLHGNPWL 208 (290)
T ss_dssp TTTTTTCCCSEEECCSCCBC
T ss_pred hhhcccccCCeEEeCCCCcc
Confidence 66666667777777777664
No 331
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.89 E-value=2.5e-23 Score=227.63 Aligned_cols=153 Identities=23% Similarity=0.275 Sum_probs=117.3
Q ss_pred eEEEccCCcccccCCccccccCCcccEEEccCCcccccCccccCCCCCCCEEEccCCCCCCCCcccccCCCCCCEEEcCC
Q 045553 521 LIFDIGNNKLIGEVPSDMGSHCKCMKFLSMAGNEFVGLIPQSFTNFDSLRNLNLSRNHLQGPLPSYINKMEDLKFLSLSL 600 (1082)
Q Consensus 521 ~~l~l~~n~l~~~ip~~~~~~~~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~ 600 (1082)
++|++++|++. .+|...+..+++|++|++++|++++..+..|..+++|++|+|++|++++..+..|..+++|+.|++++
T Consensus 88 ~~L~L~~n~l~-~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~ 166 (272)
T 3rfs_A 88 TYLILTGNQLQ-SLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDLSY 166 (272)
T ss_dssp CEEECTTSCCC-CCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CEEECCCCccC-ccChhHhcCCcCCCEEECCCCcCCccCHHHhccCCCCCEEECCCCccCccCHHHhccCccCCEEECCC
Confidence 34444444444 34444445566688888888888877777788888888888888888877777778888888888888
Q ss_pred CcCCccCchhhhcCcccchhhccCcccCCCCCccccCCcccceecccCcccCCCCCCCCCCCCcccEEeccCCccccCCC
Q 045553 601 NNFTGAIPWELTQLASLEVLELSANSLSGEIPSEFSKLEHLNVLRLDHNNLTGRIPPGFGTRSSLSIFDVSFNNLSGSAP 680 (1082)
Q Consensus 601 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~l~ls~N~l~~~~p 680 (1082)
|++++..+..|..+++|++|+|++|++++..|..|..+++|+.|+|++|++.+. +++|+.|+++.|+++|.+|
T Consensus 167 n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~-------~~~l~~l~~~~n~~~g~ip 239 (272)
T 3rfs_A 167 NQLQSLPEGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCT-------CPGIRYLSEWINKHSGVVR 239 (272)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCC-------TTTTHHHHHHHHHTGGGBB
T ss_pred CCcCccCHHHhcCCccCCEEECCCCcCCccCHHHHhCCcCCCEEEccCCCcccc-------CcHHHHHHHHHHhCCCccc
Confidence 888877777778888888888888888877777788888888888888888754 4467888888888888888
Q ss_pred C
Q 045553 681 R 681 (1082)
Q Consensus 681 ~ 681 (1082)
.
T Consensus 240 ~ 240 (272)
T 3rfs_A 240 N 240 (272)
T ss_dssp C
T ss_pred C
Confidence 5
No 332
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.89 E-value=1.2e-22 Score=222.15 Aligned_cols=176 Identities=24% Similarity=0.286 Sum_probs=94.6
Q ss_pred ccCCCCCCEEEcccCCCcccCChhhcCCCCCCEEeCcCCCCCCCCCccccCCCCCCeEEccCcccccccCccccCCCCCc
Q 045553 106 IGDLTQLRVLLLAFNGFSGELPLEIGQLSLLEILDLSFNSFHGPIPPTLQNCSSLRLINLSGNQFNGTIPAFFGQSPGFQ 185 (1082)
Q Consensus 106 l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~ 185 (1082)
+.++++|+.|++++|.++ .++ .++.+++|++|+|++|.+++ + ..+.++++|++|+|++|++++..+..|..+++|+
T Consensus 37 ~~~l~~L~~L~l~~~~i~-~~~-~l~~l~~L~~L~l~~n~l~~-~-~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~ 112 (272)
T 3rfs_A 37 QNELNSIDQIIANNSDIK-SVQ-GIQYLPNVRYLALGGNKLHD-I-SALKELTNLTYLILTGNQLQSLPNGVFDKLTNLK 112 (272)
T ss_dssp HHHHTTCCEEECTTSCCC-CCT-TGGGCTTCCEEECTTSCCCC-C-GGGTTCTTCCEEECTTSCCCCCCTTTTTTCTTCC
T ss_pred cccccceeeeeeCCCCcc-ccc-ccccCCCCcEEECCCCCCCC-c-hhhcCCCCCCEEECCCCccCccChhHhcCCcCCC
Confidence 455666666666666665 222 36666666666666666663 2 3566666666666666666655555566666666
Q ss_pred EEEcccCcccccCCcccccccccccEEEcccCccCCCCCccccCCCCccEEEccCCcCCCCcCccccCCCCCCEEeCCCC
Q 045553 186 VVSLSFNLLSGSVPEEFGDNCVSLEHILLAANSLTGSIPPSLGNCTELRSLLLSSNMLQGDIPSSFGQLVNLEVLDLSRN 265 (1082)
Q Consensus 186 ~L~L~~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N 265 (1082)
+|+|++|+++ .++...+..+++|++|++++|++++..+..+..+++|++|++++|++++..+..|+.+++|++|++++|
T Consensus 113 ~L~L~~n~l~-~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N 191 (272)
T 3rfs_A 113 ELVLVENQLQ-SLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQSLPEGVFDKLTQLKDLRLYQN 191 (272)
T ss_dssp EEECTTSCCC-CCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred EEECCCCcCC-ccCHHHhccCCCCCEEECCCCccCccCHHHhccCccCCEEECCCCCcCccCHHHhcCCccCCEEECCCC
Confidence 6666666665 333332234455555555555555444444455555555555555555444444455555555555555
Q ss_pred cCcccCCccccCCCCCcEEEe
Q 045553 266 FLSGIVPSELGMCKQLKVLVL 286 (1082)
Q Consensus 266 ~l~~~~p~~l~~l~~L~~L~l 286 (1082)
++++..|..+..+++|++|++
T Consensus 192 ~l~~~~~~~~~~l~~L~~L~l 212 (272)
T 3rfs_A 192 QLKSVPDGVFDRLTSLQYIWL 212 (272)
T ss_dssp CCSCCCTTTTTTCTTCCEEEC
T ss_pred cCCccCHHHHhCCcCCCEEEc
Confidence 554443333333333333333
No 333
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.88 E-value=3.3e-22 Score=216.01 Aligned_cols=160 Identities=23% Similarity=0.257 Sum_probs=142.8
Q ss_pred CCCCEEEcccCCCcccCChhhcCCCCCCEEeCcCCCCCCCCCccccCCCCCCeEEccCcccccccCccccCCCCCcEEEc
Q 045553 110 TQLRVLLLAFNGFSGELPLEIGQLSLLEILDLSFNSFHGPIPPTLQNCSSLRLINLSGNQFNGTIPAFFGQSPGFQVVSL 189 (1082)
Q Consensus 110 ~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 189 (1082)
++|+.|+|++|++++..+..|+.+++|++|+|++|.+++..|..|.++++|++|+|++|++++..+..|..+++|++|+|
T Consensus 35 ~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 114 (251)
T 3m19_A 35 ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYL 114 (251)
T ss_dssp TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHhHhccCCcCCEEECCCCcccccChhHhcccCCCCEEEc
Confidence 58899999999999888889999999999999999999888888999999999999999999888888999999999999
Q ss_pred ccCcccccCCcccccccccccEEEcccCccCCCCCccccCCCCccEEEccCCcCCCCcCccccCCCCCCEEeCCCCcCcc
Q 045553 190 SFNLLSGSVPEEFGDNCVSLEHILLAANSLTGSIPPSLGNCTELRSLLLSSNMLQGDIPSSFGQLVNLEVLDLSRNFLSG 269 (1082)
Q Consensus 190 ~~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 269 (1082)
++|+++ .+|...+..+++|++|+|++|+|++..+..|..+++|++|+|++|++++..+..|..+++|++|+|++|++.+
T Consensus 115 ~~N~l~-~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c 193 (251)
T 3m19_A 115 GGNQLK-SLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQSVPHGAFDRLGKLQTITLFGNQFDC 193 (251)
T ss_dssp CSSCCC-CCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCT
T ss_pred CCCcCC-CcChhHhccCCcccEEECcCCcCCccCHHHcCcCcCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCceeC
Confidence 999998 6666655578899999999999997766688899999999999999997777788899999999999999875
Q ss_pred c
Q 045553 270 I 270 (1082)
Q Consensus 270 ~ 270 (1082)
.
T Consensus 194 ~ 194 (251)
T 3m19_A 194 S 194 (251)
T ss_dssp T
T ss_pred C
Confidence 4
No 334
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.88 E-value=4e-24 Score=242.14 Aligned_cols=184 Identities=20% Similarity=0.193 Sum_probs=137.1
Q ss_pred ccccCC--CCCCEEEcccCCCcccCChhhcCCCCCCEEeCcCCCCCCC-CCccccCCCCCCeEEccCcccccccCccccC
Q 045553 104 RAIGDL--TQLRVLLLAFNGFSGELPLEIGQLSLLEILDLSFNSFHGP-IPPTLQNCSSLRLINLSGNQFNGTIPAFFGQ 180 (1082)
Q Consensus 104 ~~l~~l--~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~-~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~ 180 (1082)
..+..+ ++++.|++++|.+++..+. +..+++|++|+|++|.+++. +|..+.++++|++|+|++|++++..+..++.
T Consensus 62 ~~~~~~~~~~l~~L~l~~n~l~~~~~~-~~~~~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~ 140 (336)
T 2ast_B 62 DVTGRLLSQGVIAFRCPRSFMDQPLAE-HFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAK 140 (336)
T ss_dssp HHHHHHHHTTCSEEECTTCEECSCCCS-CCCCBCCCEEECTTCEECHHHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTT
T ss_pred HHHHhhhhccceEEEcCCccccccchh-hccCCCCCEEEccCCCcCHHHHHHHHhhCCCCCEEeCcCcccCHHHHHHHhc
Confidence 445555 7889999999988866554 56788999999999988765 7778888899999999999888888888888
Q ss_pred CCCCcEEEcccC-ccccc-CCcccccccccccEEEcccC-ccCCC-CCccccCCC-CccEEEccCC--cCC-CCcCcccc
Q 045553 181 SPGFQVVSLSFN-LLSGS-VPEEFGDNCVSLEHILLAAN-SLTGS-IPPSLGNCT-ELRSLLLSSN--MLQ-GDIPSSFG 252 (1082)
Q Consensus 181 l~~L~~L~L~~N-~l~~~-~p~~~~~~l~~L~~L~L~~N-~l~~~-~~~~~~~l~-~L~~L~L~~N--~l~-~~~p~~~~ 252 (1082)
+++|++|+|++| .+++. ++..+ ..+++|++|++++| .+++. ++..+..++ +|++|++++| .++ +.++..+.
T Consensus 141 ~~~L~~L~L~~~~~l~~~~l~~~~-~~~~~L~~L~l~~~~~l~~~~~~~~~~~l~~~L~~L~l~~~~~~~~~~~l~~~~~ 219 (336)
T 2ast_B 141 NSNLVRLNLSGCSGFSEFALQTLL-SSCSRLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLVR 219 (336)
T ss_dssp CTTCSEEECTTCBSCCHHHHHHHH-HHCTTCCEEECCCCTTCCHHHHHHHHHHSCTTCCEEECCSCGGGSCHHHHHHHHH
T ss_pred CCCCCEEECCCCCCCCHHHHHHHH-hcCCCCCEEcCCCCCCcChHHHHHHHHhcccCCCEEEeCCCcccCCHHHHHHHHh
Confidence 888999999888 56643 33333 35777888888888 77753 455667777 7888888887 444 34566667
Q ss_pred CCCCCCEEeCCCCc-CcccCCccccCCCCCcEEEeccc
Q 045553 253 QLVNLEVLDLSRNF-LSGIVPSELGMCKQLKVLVLRND 289 (1082)
Q Consensus 253 ~l~~L~~L~Ls~N~-l~~~~p~~l~~l~~L~~L~l~~n 289 (1082)
.+++|++|++++|. +++..+..+..+++|++|++++|
T Consensus 220 ~~~~L~~L~l~~~~~l~~~~~~~l~~l~~L~~L~l~~~ 257 (336)
T 2ast_B 220 RCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQHLSLSRC 257 (336)
T ss_dssp HCTTCSEEECTTCTTCCGGGGGGGGGCTTCCEEECTTC
T ss_pred hCCCCCEEeCCCCCcCCHHHHHHHhCCCCCCEeeCCCC
Confidence 77778888887777 66566666677777777777664
No 335
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.87 E-value=1.5e-23 Score=239.61 Aligned_cols=254 Identities=18% Similarity=0.123 Sum_probs=142.3
Q ss_pred CCCCCccccccccccCCCCCCEEEcccCCCcccCC----hhhcCCC-CCCEEeCcCCCCCCCCCccccCC-----CCCCe
Q 045553 93 NSSDKLSGNLSRAIGDLTQLRVLLLAFNGFSGELP----LEIGQLS-LLEILDLSFNSFHGPIPPTLQNC-----SSLRL 162 (1082)
Q Consensus 93 ~~~~~l~g~l~~~l~~l~~L~~L~L~~n~l~~~~p----~~~~~l~-~L~~L~Ls~n~l~~~~p~~l~~l-----~~L~~ 162 (1082)
.+.++++|.+|..+...++|++|+|++|.+++..+ ..|..++ +|++|+|++|.+++..+..+..+ ++|++
T Consensus 5 ls~n~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~ 84 (362)
T 3goz_A 5 LTLHPGSNPVEEFTSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPANVTS 84 (362)
T ss_dssp CCCCTTCCHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTTCCE
T ss_pred cccccchHHHHHHHhCCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCCccE
Confidence 45567777777777777777777777777775555 5667777 77777777777776666666554 77777
Q ss_pred EEccCcccccccCcccc----CC-CCCcEEEcccCcccccCCcccccc----cccccEEEcccCccCCCCCcc----ccC
Q 045553 163 INLSGNQFNGTIPAFFG----QS-PGFQVVSLSFNLLSGSVPEEFGDN----CVSLEHILLAANSLTGSIPPS----LGN 229 (1082)
Q Consensus 163 L~Ls~N~l~~~~p~~~~----~l-~~L~~L~L~~N~l~~~~p~~~~~~----l~~L~~L~L~~N~l~~~~~~~----~~~ 229 (1082)
|+|++|++++..+..+. .+ ++|++|+|++|++++..+..+... .++|++|+|++|++++..+.. +..
T Consensus 85 L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~ 164 (362)
T 3goz_A 85 LNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKSSDELIQILAA 164 (362)
T ss_dssp EECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGGSCHHHHHHHHHT
T ss_pred EECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCHHHHHHHHHHHhc
Confidence 77777777765555333 33 677777777777764433333211 235556666665555433222 223
Q ss_pred CC-CccEEEccCCcCCCCcCcccc----CC-CCCCEEeCCCCcCcccCCccccCCCCCcEEEeccccCCcccccCCCCCC
Q 045553 230 CT-ELRSLLLSSNMLQGDIPSSFG----QL-VNLEVLDLSRNFLSGIVPSELGMCKQLKVLVLRNDYGPLYSREHGDLPI 303 (1082)
Q Consensus 230 l~-~L~~L~L~~N~l~~~~p~~~~----~l-~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~n~~~~~~~~~~~l~~ 303 (1082)
++ +|++|+|++|++++..+..++ .+ ++|++|+|++|.+++....
T Consensus 165 ~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~i~~~~~~------------------------------ 214 (362)
T 3goz_A 165 IPANVNSLNLRGNNLASKNCAELAKFLASIPASVTSLDLSANLLGLKSYA------------------------------ 214 (362)
T ss_dssp SCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGSCHH------------------------------
T ss_pred CCccccEeeecCCCCchhhHHHHHHHHHhCCCCCCEEECCCCCCChhHHH------------------------------
Confidence 33 555555555555544333222 22 3555555555555431111
Q ss_pred cccccCCCcccccCCCCCccccCC-CCCcEEEcCCCcccCCCC----cccccccCCCeEEcCCccccCC-------CCcc
Q 045553 304 QPVVDGGEDYNFFDGGLPDSITRL-PNLRVFWAPNLNLEGIFP----QNWELCSKLEMLNLAHNFFTGQ-------IPAS 371 (1082)
Q Consensus 304 ~~~~~~~~~~n~~~~~~p~~l~~l-~~L~~L~l~~n~l~~~~~----~~l~~l~~L~~L~Ls~N~i~~~-------~p~~ 371 (1082)
.++..+..+ ++|++|++++|.+.+..+ ..+..+++|++|+|++|.+.+. ++..
T Consensus 215 ---------------~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~~~~l~~L~~L~L~~n~l~~i~~~~~~~l~~~ 279 (362)
T 3goz_A 215 ---------------ELAYIFSSIPNHVVSLNLCLNCLHGPSLENLKLLKDSLKHLQTVYLDYDIVKNMSKEQCKALGAA 279 (362)
T ss_dssp ---------------HHHHHHHHSCTTCCEEECCSSCCCCCCHHHHHHTTTTTTTCSEEEEEHHHHTTCCHHHHHHHHTT
T ss_pred ---------------HHHHHHhcCCCCceEEECcCCCCCcHHHHHHHHHHhcCCCccEEEeccCCccccCHHHHHHHHHH
Confidence 112222221 245555555555544433 2234456677777777764322 2335
Q ss_pred ccCCCCCCEEecCCCcCccc
Q 045553 372 LGNCKSLYFLDLSSNNLTGL 391 (1082)
Q Consensus 372 ~~~l~~L~~L~Ls~N~l~~~ 391 (1082)
+..+++|+.|||++|++.+.
T Consensus 280 ~~~l~~L~~LdL~~N~l~~~ 299 (362)
T 3goz_A 280 FPNIQKIILVDKNGKEIHPS 299 (362)
T ss_dssp STTCCEEEEECTTSCBCCGG
T ss_pred hccCCceEEEecCCCcCCCc
Confidence 55666677777777776644
No 336
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.87 E-value=1e-21 Score=210.59 Aligned_cols=176 Identities=14% Similarity=0.147 Sum_probs=146.3
Q ss_pred CCCEEEcccCCCcccCChhhcCCCCCCEEeCcCCC-CCCCCCccccCCCCCCeEEccC-cccccccCccccCCCCCcEEE
Q 045553 111 QLRVLLLAFNGFSGELPLEIGQLSLLEILDLSFNS-FHGPIPPTLQNCSSLRLINLSG-NQFNGTIPAFFGQSPGFQVVS 188 (1082)
Q Consensus 111 ~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~-l~~~~p~~l~~l~~L~~L~Ls~-N~l~~~~p~~~~~l~~L~~L~ 188 (1082)
+|++|+|++|++++..+..|+.+++|++|+|++|. +++..+..|.++++|++|+|++ |++++..+..|..+++|++|+
T Consensus 32 ~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~L~ 111 (239)
T 2xwt_C 32 STQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFLG 111 (239)
T ss_dssp TCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCEEE
T ss_pred cccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCEEe
Confidence 78899999999987666788999999999999997 8866666888999999999998 899877778888999999999
Q ss_pred cccCcccccCCccccccccccc---EEEcccC-ccCCCCCccccCCCCcc-EEEccCCcCCCCcCc-cccCCCCCCEEeC
Q 045553 189 LSFNLLSGSVPEEFGDNCVSLE---HILLAAN-SLTGSIPPSLGNCTELR-SLLLSSNMLQGDIPS-SFGQLVNLEVLDL 262 (1082)
Q Consensus 189 L~~N~l~~~~p~~~~~~l~~L~---~L~L~~N-~l~~~~~~~~~~l~~L~-~L~L~~N~l~~~~p~-~~~~l~~L~~L~L 262 (1082)
+++|+++ .+|. + ..+++|+ +|++++| ++++..+..|.++++|+ +|++++|+++ .+|. .|.. ++|++|++
T Consensus 112 l~~n~l~-~lp~-~-~~l~~L~~L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n~l~-~i~~~~~~~-~~L~~L~L 186 (239)
T 2xwt_C 112 IFNTGLK-MFPD-L-TKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFT-SVQGYAFNG-TKLDAVYL 186 (239)
T ss_dssp EEEECCC-SCCC-C-TTCCBCCSEEEEEEESCTTCCEECTTTTTTTBSSEEEEECCSCCCC-EECTTTTTT-CEEEEEEC
T ss_pred CCCCCCc-cccc-c-ccccccccccEEECCCCcchhhcCcccccchhcceeEEEcCCCCCc-ccCHhhcCC-CCCCEEEc
Confidence 9999998 4776 3 4677887 9999999 88877677788899999 9999999998 4544 4444 88999999
Q ss_pred CCCc-CcccCCccccCC-CCCcEEEeccccC
Q 045553 263 SRNF-LSGIVPSELGMC-KQLKVLVLRNDYG 291 (1082)
Q Consensus 263 s~N~-l~~~~p~~l~~l-~~L~~L~l~~n~~ 291 (1082)
++|+ +++..+..|..+ ++|+.|++++|.+
T Consensus 187 ~~n~~l~~i~~~~~~~l~~~L~~L~l~~N~l 217 (239)
T 2xwt_C 187 NKNKYLTVIDKDAFGGVYSGPSLLDVSQTSV 217 (239)
T ss_dssp TTCTTCCEECTTTTTTCSBCCSEEECTTCCC
T ss_pred CCCCCcccCCHHHhhccccCCcEEECCCCcc
Confidence 9995 887777888888 9999999988644
No 337
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.86 E-value=4.7e-23 Score=235.58 Aligned_cols=202 Identities=20% Similarity=0.164 Sum_probs=158.5
Q ss_pred cccCCCCCCcccccc----ccccCCC-CCCEEEcccCCCcccCChhhcCC-----CCCCEEeCcCCCCCCCCCccc----
Q 045553 89 NINSNSSDKLSGNLS----RAIGDLT-QLRVLLLAFNGFSGELPLEIGQL-----SLLEILDLSFNSFHGPIPPTL---- 154 (1082)
Q Consensus 89 ~~~~~~~~~l~g~l~----~~l~~l~-~L~~L~L~~n~l~~~~p~~~~~l-----~~L~~L~Ls~n~l~~~~p~~l---- 154 (1082)
...+.+.+.+.+.-+ +.+..++ +|++|+|++|.+++..+..+..+ ++|++|+|++|.+++..+..+
T Consensus 25 ~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l 104 (362)
T 3goz_A 25 TSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPANVTSLNLSGNFLSYKSSDELVKTL 104 (362)
T ss_dssp CEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHH
T ss_pred eEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCCccEEECcCCcCChHHHHHHHHHH
Confidence 334466778887766 7889999 99999999999998888888775 999999999999997777654
Q ss_pred cCC-CCCCeEEccCcccccccCccc----cCC-CCCcEEEcccCcccccCCccccc---cc-ccccEEEcccCccCCCCC
Q 045553 155 QNC-SSLRLINLSGNQFNGTIPAFF----GQS-PGFQVVSLSFNLLSGSVPEEFGD---NC-VSLEHILLAANSLTGSIP 224 (1082)
Q Consensus 155 ~~l-~~L~~L~Ls~N~l~~~~p~~~----~~l-~~L~~L~L~~N~l~~~~p~~~~~---~l-~~L~~L~L~~N~l~~~~~ 224 (1082)
..+ ++|++|+|++|++++..+..+ ..+ ++|++|+|++|++++..+..+.. .+ ++|++|+|++|++++..+
T Consensus 105 ~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~~~~~ 184 (362)
T 3goz_A 105 AAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKSSDELIQILAAIPANVNSLNLRGNNLASKNC 184 (362)
T ss_dssp HTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGSCH
T ss_pred HhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCHHHHHHHHHHHhcCCccccEeeecCCCCchhhH
Confidence 444 899999999999997766554 343 69999999999999544433321 23 499999999999998777
Q ss_pred cccc----CC-CCccEEEccCCcCCCC----cCccccC-CCCCCEEeCCCCcCcccCC----ccccCCCCCcEEEecccc
Q 045553 225 PSLG----NC-TELRSLLLSSNMLQGD----IPSSFGQ-LVNLEVLDLSRNFLSGIVP----SELGMCKQLKVLVLRNDY 290 (1082)
Q Consensus 225 ~~~~----~l-~~L~~L~L~~N~l~~~----~p~~~~~-l~~L~~L~Ls~N~l~~~~p----~~l~~l~~L~~L~l~~n~ 290 (1082)
..+. .+ ++|++|+|++|.+++. ++..+.. .++|++|+|++|++++..+ ..+..+++|++|++++|.
T Consensus 185 ~~l~~~l~~~~~~L~~L~Ls~N~i~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~~~~l~~L~~L~L~~n~ 264 (362)
T 3goz_A 185 AELAKFLASIPASVTSLDLSANLLGLKSYAELAYIFSSIPNHVVSLNLCLNCLHGPSLENLKLLKDSLKHLQTVYLDYDI 264 (362)
T ss_dssp HHHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHHSCTTCCEEECCSSCCCCCCHHHHHHTTTTTTTCSEEEEEHHH
T ss_pred HHHHHHHHhCCCCCCEEECCCCCCChhHHHHHHHHHhcCCCCceEEECcCCCCCcHHHHHHHHHHhcCCCccEEEeccCC
Confidence 5554 44 6999999999999853 4556665 4599999999999987554 344667778888887753
No 338
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.86 E-value=2.2e-21 Score=209.56 Aligned_cols=175 Identities=23% Similarity=0.250 Sum_probs=107.3
Q ss_pred eeEEEccCCcccccCCccccccCCcccEEEccCCcccccCccccCCCCCCCEEEccCCCCCCCCcccccCCCCCCEEEcC
Q 045553 520 GLIFDIGNNKLIGEVPSDMGSHCKCMKFLSMAGNEFVGLIPQSFTNFDSLRNLNLSRNHLQGPLPSYINKMEDLKFLSLS 599 (1082)
Q Consensus 520 l~~l~l~~n~l~~~ip~~~~~~~~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls 599 (1082)
.++++++++.+. .+|..++ ++++.|+|++|+|++..+..|.++++|++|+|++|.|++..+..|..+++|++|+|+
T Consensus 16 ~~~l~~~~~~l~-~~p~~~~---~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 91 (251)
T 3m19_A 16 KKEVDCQGKSLD-SVPSGIP---ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLA 91 (251)
T ss_dssp GTEEECTTCCCS-SCCSCCC---TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECT
T ss_pred CeEEecCCCCcc-ccCCCCC---CCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHhHhccCCcCCEEECC
Confidence 345666666665 5665554 346666666666666666666666666666666666666655566666666666666
Q ss_pred CCcCCccCchhhhcCcccchhhccCcccCCCCCccccCCcccceecccCcccCCCCCCCCCCCCcccEEeccCCccccCC
Q 045553 600 LNNFTGAIPWELTQLASLEVLELSANSLSGEIPSEFSKLEHLNVLRLDHNNLTGRIPPGFGTRSSLSIFDVSFNNLSGSA 679 (1082)
Q Consensus 600 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~l~ls~N~l~~~~ 679 (1082)
+|++++..+..|..+++|++|+|++|+|++..+..|..+++|++|+|++|+|++..+..|..+++|+.|+|++|++++..
T Consensus 92 ~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~ 171 (251)
T 3m19_A 92 NNQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQSVP 171 (251)
T ss_dssp TSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCC
T ss_pred CCcccccChhHhcccCCCCEEEcCCCcCCCcChhHhccCCcccEEECcCCcCCccCHHHcCcCcCCCEEECCCCcCCccC
Confidence 66666555555666666666666666666555555566666666666666666555555666666666666666666443
Q ss_pred CCC----cccccccCCCCCCCCC
Q 045553 680 PRN----SLIKCENVQGNPNLQL 698 (1082)
Q Consensus 680 p~~----~~~~~~~~~~Np~~c~ 698 (1082)
+.. ..+....+.+|||.|+
T Consensus 172 ~~~~~~l~~L~~L~l~~N~~~c~ 194 (251)
T 3m19_A 172 HGAFDRLGKLQTITLFGNQFDCS 194 (251)
T ss_dssp TTTTTTCTTCCEEECCSCCBCTT
T ss_pred HHHHhCCCCCCEEEeeCCceeCC
Confidence 321 2234455666666666
No 339
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.86 E-value=1.1e-23 Score=243.39 Aligned_cols=248 Identities=20% Similarity=0.247 Sum_probs=152.9
Q ss_pred cccccccCCCCCCEEEcccCCCcccCC----hhhcCCCCCCEEeCcCC---CCCCCCCccc-------cCCCCCCeEEcc
Q 045553 101 NLSRAIGDLTQLRVLLLAFNGFSGELP----LEIGQLSLLEILDLSFN---SFHGPIPPTL-------QNCSSLRLINLS 166 (1082)
Q Consensus 101 ~l~~~l~~l~~L~~L~L~~n~l~~~~p----~~~~~l~~L~~L~Ls~n---~l~~~~p~~l-------~~l~~L~~L~Ls 166 (1082)
.++..+..+++|++|+|++|.+++..+ ..+..+++|++|+|++| ++++.+|..+ .++++|++|+|+
T Consensus 23 ~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~~~~~~l~~~~~~~~~~l~~~l~~~~~L~~L~Ls 102 (386)
T 2ca6_A 23 SVFAVLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLS 102 (386)
T ss_dssp TTSHHHHHCSCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECC
T ss_pred HHHHHHhcCCCccEEECCCCCCCHHHHHHHHHHHHhCCCccEEeCcccccCccccchhHHHHHHHHHHhhCCcccEEECC
Confidence 466777888888888888888886533 34667888888888885 4445556555 678888888888
Q ss_pred Cccccc----ccCccccCCCCCcEEEcccCcccccCCccccccc------------ccccEEEcccCccC-CCCC---cc
Q 045553 167 GNQFNG----TIPAFFGQSPGFQVVSLSFNLLSGSVPEEFGDNC------------VSLEHILLAANSLT-GSIP---PS 226 (1082)
Q Consensus 167 ~N~l~~----~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l------------~~L~~L~L~~N~l~-~~~~---~~ 226 (1082)
+|++.+ .+|..+..+++|++|+|++|.+....+..+...+ ++|++|+|++|+++ +.++ ..
T Consensus 103 ~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~l~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~ 182 (386)
T 2ca6_A 103 DNAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKT 182 (386)
T ss_dssp SCCCCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTGGGHHHHHHH
T ss_pred CCcCCHHHHHHHHHHHHhCCCCCEEECcCCCCCHHHHHHHHHHHHHHhhhhhcccCCCCcEEECCCCCCCcHHHHHHHHH
Confidence 888886 4667777888888888888887644333333222 45555555555554 2222 23
Q ss_pred ccCCCCccEEEccCCcCCC-----CcCccccCCCCCCEEeCCCCcCcccCCccccCCCCCcEEEeccccCCcccccCCCC
Q 045553 227 LGNCTELRSLLLSSNMLQG-----DIPSSFGQLVNLEVLDLSRNFLSGIVPSELGMCKQLKVLVLRNDYGPLYSREHGDL 301 (1082)
Q Consensus 227 ~~~l~~L~~L~L~~N~l~~-----~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~n~~~~~~~~~~~l 301 (1082)
+..+++|++|+|++|+++. ..+..+..+++|++|+|++|.++...
T Consensus 183 l~~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g------------------------------ 232 (386)
T 2ca6_A 183 FQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLG------------------------------ 232 (386)
T ss_dssp HHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHH------------------------------
T ss_pred HHhCCCcCEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHH------------------------------
Confidence 3444555555555555541 12224444555555555555543100
Q ss_pred CCcccccCCCcccccCCCCCccccCCCCCcEEEcCCCcccCC----CCccccc--ccCCCeEEcCCccccC----CCCcc
Q 045553 302 PIQPVVDGGEDYNFFDGGLPDSITRLPNLRVFWAPNLNLEGI----FPQNWEL--CSKLEMLNLAHNFFTG----QIPAS 371 (1082)
Q Consensus 302 ~~~~~~~~~~~~n~~~~~~p~~l~~l~~L~~L~l~~n~l~~~----~~~~l~~--l~~L~~L~Ls~N~i~~----~~p~~ 371 (1082)
...+|..+..+++|++|++++|.+.+. ++..+.. +++|++|+|++|.|++ .+|..
T Consensus 233 ---------------~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~~L~~L~L~~n~i~~~g~~~l~~~ 297 (386)
T 2ca6_A 233 ---------------SSALAIALKSWPNLRELGLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTV 297 (386)
T ss_dssp ---------------HHHHHHHGGGCTTCCEEECTTCCCCHHHHHHHHHHHHTCSSCCCCEEECCSSCCBHHHHHHHHHH
T ss_pred ---------------HHHHHHHHccCCCcCEEECCCCCCchhhHHHHHHHHhhccCCCeEEEECcCCcCCHHHHHHHHHH
Confidence 012334445555555555555665554 3344422 6778888888888875 36666
Q ss_pred c-cCCCCCCEEecCCCcCcccCC
Q 045553 372 L-GNCKSLYFLDLSSNNLTGLLP 393 (1082)
Q Consensus 372 ~-~~l~~L~~L~Ls~N~l~~~~p 393 (1082)
+ .++++|+.|+|++|++++..+
T Consensus 298 l~~~l~~L~~L~l~~N~l~~~~~ 320 (386)
T 2ca6_A 298 IDEKMPDLLFLELNGNRFSEEDD 320 (386)
T ss_dssp HHHHCTTCCEEECTTSBSCTTSH
T ss_pred HHhcCCCceEEEccCCcCCcchh
Confidence 6 557888888888888876653
No 340
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.86 E-value=2.8e-23 Score=239.82 Aligned_cols=250 Identities=20% Similarity=0.189 Sum_probs=184.0
Q ss_pred cccCCCCCCcccc----ccccccCCCCCCEEEcccC---CCcccCChhh-------cCCCCCCEEeCcCCCCCC----CC
Q 045553 89 NINSNSSDKLSGN----LSRAIGDLTQLRVLLLAFN---GFSGELPLEI-------GQLSLLEILDLSFNSFHG----PI 150 (1082)
Q Consensus 89 ~~~~~~~~~l~g~----l~~~l~~l~~L~~L~L~~n---~l~~~~p~~~-------~~l~~L~~L~Ls~n~l~~----~~ 150 (1082)
.....+.+.+.+. ++..|..+++|++|+|++| ++++.+|..+ ..+++|++|+|++|.+++ .+
T Consensus 35 ~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~~~~~~l~~~~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l 114 (386)
T 2ca6_A 35 KEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLSDNAFGPTAQEPL 114 (386)
T ss_dssp CEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECCSCCCCTTTHHHH
T ss_pred cEEECCCCCCCHHHHHHHHHHHHhCCCccEEeCcccccCccccchhHHHHHHHHHHhhCCcccEEECCCCcCCHHHHHHH
Confidence 3444566777776 4455889999999999996 5556677665 789999999999999997 47
Q ss_pred CccccCCCCCCeEEccCcccccccCcccc----CC---------CCCcEEEcccCccc-ccCCc--ccccccccccEEEc
Q 045553 151 PPTLQNCSSLRLINLSGNQFNGTIPAFFG----QS---------PGFQVVSLSFNLLS-GSVPE--EFGDNCVSLEHILL 214 (1082)
Q Consensus 151 p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~----~l---------~~L~~L~L~~N~l~-~~~p~--~~~~~l~~L~~L~L 214 (1082)
|..+.++++|++|+|++|.++...+..+. .+ ++|++|+|++|+++ +.+|. .....+++|++|+|
T Consensus 115 ~~~l~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~l~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L 194 (386)
T 2ca6_A 115 IDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKTFQSHRLLHTVKM 194 (386)
T ss_dssp HHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTGGGHHHHHHHHHHCTTCCEEEC
T ss_pred HHHHHhCCCCCEEECcCCCCCHHHHHHHHHHHHHHhhhhhcccCCCCcEEECCCCCCCcHHHHHHHHHHHhCCCcCEEEC
Confidence 88899999999999999999855444443 34 99999999999997 34442 12235789999999
Q ss_pred ccCccCC-----CCCccccCCCCccEEEccCCcCC----CCcCccccCCCCCCEEeCCCCcCccc----CCccccCCCCC
Q 045553 215 AANSLTG-----SIPPSLGNCTELRSLLLSSNMLQ----GDIPSSFGQLVNLEVLDLSRNFLSGI----VPSELGMCKQL 281 (1082)
Q Consensus 215 ~~N~l~~-----~~~~~~~~l~~L~~L~L~~N~l~----~~~p~~~~~l~~L~~L~Ls~N~l~~~----~p~~l~~l~~L 281 (1082)
++|+++. ..+..+..+++|++|+|++|.++ +.+|..+..+++|++|+|++|.+++. ++..+..
T Consensus 195 ~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~---- 270 (386)
T 2ca6_A 195 VQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLNDCLLSARGAAAVVDAFSK---- 270 (386)
T ss_dssp CSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEECTTCCCCHHHHHHHHHHHHT----
T ss_pred cCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHHHHccCCCcCEEECCCCCCchhhHHHHHHHHhh----
Confidence 9999983 34447889999999999999996 56788899999999999999999865 3333321
Q ss_pred cEEEeccccCCcccccCCCCCCcccccCCCcccccCCCCCccccCCCCCcEEEcCCCcccC----CCCccc-ccccCCCe
Q 045553 282 KVLVLRNDYGPLYSREHGDLPIQPVVDGGEDYNFFDGGLPDSITRLPNLRVFWAPNLNLEG----IFPQNW-ELCSKLEM 356 (1082)
Q Consensus 282 ~~L~l~~n~~~~~~~~~~~l~~~~~~~~~~~~n~~~~~~p~~l~~l~~L~~L~l~~n~l~~----~~~~~l-~~l~~L~~ 356 (1082)
+.+++|++|++++|.+.. .+|..+ ..+++|++
T Consensus 271 -------------------------------------------~~~~~L~~L~L~~n~i~~~g~~~l~~~l~~~l~~L~~ 307 (386)
T 2ca6_A 271 -------------------------------------------LENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLF 307 (386)
T ss_dssp -------------------------------------------CSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCE
T ss_pred -------------------------------------------ccCCCeEEEECcCCcCCHHHHHHHHHHHHhcCCCceE
Confidence 124455555555555555 345555 55788888
Q ss_pred EEcCCccccCCCC--cccc-CCCCCCEEecCC
Q 045553 357 LNLAHNFFTGQIP--ASLG-NCKSLYFLDLSS 385 (1082)
Q Consensus 357 L~Ls~N~i~~~~p--~~~~-~l~~L~~L~Ls~ 385 (1082)
|+|++|++++..+ ..+. .+++++.+++..
T Consensus 308 L~l~~N~l~~~~~~~~~l~~~l~~~~~~~l~~ 339 (386)
T 2ca6_A 308 LELNGNRFSEEDDVVDEIREVFSTRGRGELDE 339 (386)
T ss_dssp EECTTSBSCTTSHHHHHHHHHHHHHTCCEECC
T ss_pred EEccCCcCCcchhHHHHHHHHhhhcCcchhhh
Confidence 8888888886553 3322 234444444433
No 341
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.85 E-value=1.1e-22 Score=230.11 Aligned_cols=253 Identities=15% Similarity=0.149 Sum_probs=158.5
Q ss_pred CCCEEEcccCCCcccCChhhcCC--CCCCEEeCcCCCCCCCCCccccCCCCCCeEEccCcccccc-cCccccCCCCCcEE
Q 045553 111 QLRVLLLAFNGFSGELPLEIGQL--SLLEILDLSFNSFHGPIPPTLQNCSSLRLINLSGNQFNGT-IPAFFGQSPGFQVV 187 (1082)
Q Consensus 111 ~L~~L~L~~n~l~~~~p~~~~~l--~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~-~p~~~~~l~~L~~L 187 (1082)
.++.|+++++.+. |..+..+ ++++.|++++|.+++..+. +.++++|++|+|++|.+++. ++..+..+++|++|
T Consensus 48 ~~~~l~l~~~~~~---~~~~~~~~~~~l~~L~l~~n~l~~~~~~-~~~~~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~L 123 (336)
T 2ast_B 48 LWQTLDLTGKNLH---PDVTGRLLSQGVIAFRCPRSFMDQPLAE-HFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNL 123 (336)
T ss_dssp TSSEEECTTCBCC---HHHHHHHHHTTCSEEECTTCEECSCCCS-CCCCBCCCEEECTTCEECHHHHHHHHTTBCCCSEE
T ss_pred hheeeccccccCC---HHHHHhhhhccceEEEcCCccccccchh-hccCCCCCEEEccCCCcCHHHHHHHHhhCCCCCEE
Confidence 3678888888776 5667777 8889999999988866554 56788899999998888765 77788888888888
Q ss_pred EcccCcccccCCcccccccccccEEEcccC-ccCCC-CCccccCCCCccEEEccCC-cCCCC-cCccccCCC-CCCEEeC
Q 045553 188 SLSFNLLSGSVPEEFGDNCVSLEHILLAAN-SLTGS-IPPSLGNCTELRSLLLSSN-MLQGD-IPSSFGQLV-NLEVLDL 262 (1082)
Q Consensus 188 ~L~~N~l~~~~p~~~~~~l~~L~~L~L~~N-~l~~~-~~~~~~~l~~L~~L~L~~N-~l~~~-~p~~~~~l~-~L~~L~L 262 (1082)
+|++|++++..+..+. .+++|++|++++| .+++. ++..+.++++|++|++++| .+++. ++..+..++ +|++|++
T Consensus 124 ~L~~~~l~~~~~~~l~-~~~~L~~L~L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~l~~~L~~L~l 202 (336)
T 2ast_B 124 SLEGLRLSDPIVNTLA-KNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAVAHVSETITQLNL 202 (336)
T ss_dssp ECTTCBCCHHHHHHHT-TCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHHHHHHHHHHSCTTCCEEEC
T ss_pred eCcCcccCHHHHHHHh-cCCCCCEEECCCCCCCCHHHHHHHHhcCCCCCEEcCCCCCCcChHHHHHHHHhcccCCCEEEe
Confidence 8888888766666665 3777777777777 56642 4555666777777777777 77643 456666777 7777777
Q ss_pred CCC--cCc-ccCCccccCCCCCcEEEeccccCCcccccCCCCCCcccccCCCcccccCCCCCccccCCCCCcEEEcCCCc
Q 045553 263 SRN--FLS-GIVPSELGMCKQLKVLVLRNDYGPLYSREHGDLPIQPVVDGGEDYNFFDGGLPDSITRLPNLRVFWAPNLN 339 (1082)
Q Consensus 263 s~N--~l~-~~~p~~l~~l~~L~~L~l~~n~~~~~~~~~~~l~~~~~~~~~~~~n~~~~~~p~~l~~l~~L~~L~l~~n~ 339 (1082)
++| .++ +.+|..+..+++|++|++++|. .+++..+..+..+++|++|++++|.
T Consensus 203 ~~~~~~~~~~~l~~~~~~~~~L~~L~l~~~~------------------------~l~~~~~~~l~~l~~L~~L~l~~~~ 258 (336)
T 2ast_B 203 SGYRKNLQKSDLSTLVRRCPNLVHLDLSDSV------------------------MLKNDCFQEFFQLNYLQHLSLSRCY 258 (336)
T ss_dssp CSCGGGSCHHHHHHHHHHCTTCSEEECTTCT------------------------TCCGGGGGGGGGCTTCCEEECTTCT
T ss_pred CCCcccCCHHHHHHHHhhCCCCCEEeCCCCC------------------------cCCHHHHHHHhCCCCCCEeeCCCCC
Confidence 777 343 3445555666666666665532 1223334445555555555555553
Q ss_pred -ccCCCCcccccccCCCeEEcCCccccCCCCccccCC-CCCCEEecCCCcCcccCCCCc
Q 045553 340 -LEGIFPQNWELCSKLEMLNLAHNFFTGQIPASLGNC-KSLYFLDLSSNNLTGLLPEEV 396 (1082)
Q Consensus 340 -l~~~~~~~l~~l~~L~~L~Ls~N~i~~~~p~~~~~l-~~L~~L~Ls~N~l~~~~p~~~ 396 (1082)
+.......+..+++|++|++++| ++.. .+..+ ..|..|++++|++++..|...
T Consensus 259 ~~~~~~~~~l~~~~~L~~L~l~~~-i~~~---~~~~l~~~l~~L~l~~n~l~~~~~~~~ 313 (336)
T 2ast_B 259 DIIPETLLELGEIPTLKTLQVFGI-VPDG---TLQLLKEALPHLQINCSHFTTIARPTI 313 (336)
T ss_dssp TCCGGGGGGGGGCTTCCEEECTTS-SCTT---CHHHHHHHSTTSEESCCCSCCTTCSSC
T ss_pred CCCHHHHHHHhcCCCCCEEeccCc-cCHH---HHHHHHhhCcceEEecccCccccCCcc
Confidence 21111123445555555555555 2211 12222 124444455555555444433
No 342
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.85 E-value=1.8e-21 Score=217.38 Aligned_cols=228 Identities=20% Similarity=0.190 Sum_probs=169.2
Q ss_pred CCCCEEEcccCCCcccC-Ch--hhcCCCCCCEEeCcCCCCCCCCCccc--cCCCCCCeEEccCcccccccC----ccccC
Q 045553 110 TQLRVLLLAFNGFSGEL-PL--EIGQLSLLEILDLSFNSFHGPIPPTL--QNCSSLRLINLSGNQFNGTIP----AFFGQ 180 (1082)
Q Consensus 110 ~~L~~L~L~~n~l~~~~-p~--~~~~l~~L~~L~Ls~n~l~~~~p~~l--~~l~~L~~L~Ls~N~l~~~~p----~~~~~ 180 (1082)
..++.|.+.++.++... .. .+..+++|++|+|++|.+++..|..+ .++++|++|+|++|++++..+ ..+..
T Consensus 64 ~~l~~l~l~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~ 143 (310)
T 4glp_A 64 LRVRRLTVGAAQVPAQLLVGALRVLAYSRLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWL 143 (310)
T ss_dssp CCCCEEEECSCCCBHHHHHHHHHHHHHSCCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTB
T ss_pred cceeEEEEeCCcCCHHHHHHHHHhcccCceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhhh
Confidence 45788888888776321 11 12345779999999999998999888 899999999999999997655 44567
Q ss_pred CCCCcEEEcccCcccccCCcccccccccccEEEcccCccCCC--C--CccccCCCCccEEEccCCcCCCCcCc----ccc
Q 045553 181 SPGFQVVSLSFNLLSGSVPEEFGDNCVSLEHILLAANSLTGS--I--PPSLGNCTELRSLLLSSNMLQGDIPS----SFG 252 (1082)
Q Consensus 181 l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~--~--~~~~~~l~~L~~L~L~~N~l~~~~p~----~~~ 252 (1082)
+++|++|+|++|++.+..|..+ ..+++|++|+|++|++.+. + +..+..+++|++|+|++|+++ .++. .++
T Consensus 144 ~~~L~~L~Ls~n~l~~~~~~~~-~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~l~~~~~~l~~ 221 (310)
T 4glp_A 144 KPGLKVLSIAQAHSPAFSCEQV-RAFPALTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGME-TPTGVCAALAA 221 (310)
T ss_dssp CSCCCEEEEECCSSCCCCTTSC-CCCTTCCEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCC-CHHHHHHHHHH
T ss_pred ccCCCEEEeeCCCcchhhHHHh-ccCCCCCEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCC-chHHHHHHHHh
Confidence 8999999999999985544555 4689999999999998752 2 233478899999999999997 3444 357
Q ss_pred CCCCCCEEeCCCCcCcccCCccccCCCCCcEEEeccccCCcccccCCCCCCcccccCCCcccccCCCCCccccCCCCCcE
Q 045553 253 QLVNLEVLDLSRNFLSGIVPSELGMCKQLKVLVLRNDYGPLYSREHGDLPIQPVVDGGEDYNFFDGGLPDSITRLPNLRV 332 (1082)
Q Consensus 253 ~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~n~~~~~~~~~~~l~~~~~~~~~~~~n~~~~~~p~~l~~l~~L~~ 332 (1082)
.+++|++|+|++|++++..|..+..+. .+++|++
T Consensus 222 ~l~~L~~L~Ls~N~l~~~~p~~~~~~~----------------------------------------------~~~~L~~ 255 (310)
T 4glp_A 222 AGVQPHSLDLSHNSLRATVNPSAPRCM----------------------------------------------WSSALNS 255 (310)
T ss_dssp HTCCCSSEECTTSCCCCCCCSCCSSCC----------------------------------------------CCTTCCC
T ss_pred cCCCCCEEECCCCCCCccchhhHHhcc----------------------------------------------CcCcCCE
Confidence 889999999999999987777665542 1234444
Q ss_pred EEcCCCcccCCCCcccccccCCCeEEcCCccccCCCCccccCCCCCCEEecCCCcCcc
Q 045553 333 FWAPNLNLEGIFPQNWELCSKLEMLNLAHNFFTGQIPASLGNCKSLYFLDLSSNNLTG 390 (1082)
Q Consensus 333 L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~ 390 (1082)
|++++|++..+ |..+. ++|++|+|++|+|++. |. +..+++|+.|+|++|+|+.
T Consensus 256 L~Ls~N~l~~l-p~~~~--~~L~~L~Ls~N~l~~~-~~-~~~l~~L~~L~L~~N~l~~ 308 (310)
T 4glp_A 256 LNLSFAGLEQV-PKGLP--AKLRVLDLSSNRLNRA-PQ-PDELPEVDNLTLDGNPFLV 308 (310)
T ss_dssp EECCSSCCCSC-CSCCC--SCCSCEECCSCCCCSC-CC-TTSCCCCSCEECSSTTTSC
T ss_pred EECCCCCCCch-hhhhc--CCCCEEECCCCcCCCC-ch-hhhCCCccEEECcCCCCCC
Confidence 44455555532 33332 6788888888888843 43 6778888888888888864
No 343
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.85 E-value=1.9e-21 Score=217.21 Aligned_cols=228 Identities=18% Similarity=0.128 Sum_probs=159.0
Q ss_pred CCCCEEeCcCCCCCCCCCc---cccCCCCCCeEEccCcccccccCccc--cCCCCCcEEEcccCcccccCC----ccccc
Q 045553 134 SLLEILDLSFNSFHGPIPP---TLQNCSSLRLINLSGNQFNGTIPAFF--GQSPGFQVVSLSFNLLSGSVP----EEFGD 204 (1082)
Q Consensus 134 ~~L~~L~Ls~n~l~~~~p~---~l~~l~~L~~L~Ls~N~l~~~~p~~~--~~l~~L~~L~L~~N~l~~~~p----~~~~~ 204 (1082)
..++.|.+.++.++...-. .+..+++|++|+|++|++.+..|..+ ..+++|++|+|++|++++..+ ..+.
T Consensus 64 ~~l~~l~l~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~- 142 (310)
T 4glp_A 64 LRVRRLTVGAAQVPAQLLVGALRVLAYSRLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQW- 142 (310)
T ss_dssp CCCCEEEECSCCCBHHHHHHHHHHHHHSCCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTT-
T ss_pred cceeEEEEeCCcCCHHHHHHHHHhcccCceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhh-
Confidence 4578888888877532111 12345678889999998888888777 788888888888888886544 1222
Q ss_pred ccccccEEEcccCccCCCCCccccCCCCccEEEccCCcCCCC--c--CccccCCCCCCEEeCCCCcCcccCCccccCCCC
Q 045553 205 NCVSLEHILLAANSLTGSIPPSLGNCTELRSLLLSSNMLQGD--I--PSSFGQLVNLEVLDLSRNFLSGIVPSELGMCKQ 280 (1082)
Q Consensus 205 ~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~--~--p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~ 280 (1082)
.+++|++|+|++|++++..+..++++++|++|+|++|++.+. + +..+..+++|++|+|++|+++. ++..
T Consensus 143 ~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~-l~~~------ 215 (310)
T 4glp_A 143 LKPGLKVLSIAQAHSPAFSCEQVRAFPALTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGMET-PTGV------ 215 (310)
T ss_dssp BCSCCCEEEEECCSSCCCCTTSCCCCTTCCEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCCC-HHHH------
T ss_pred hccCCCEEEeeCCCcchhhHHHhccCCCCCEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCCc-hHHH------
Confidence 466777777777777666666667777777777777766532 1 1223566667777777766652 1211
Q ss_pred CcEEEeccccCCcccccCCCCCCcccccCCCcccccCCCCCc-cccCCCCCcEEEcCCCcccCCCCcccccc---cCCCe
Q 045553 281 LKVLVLRNDYGPLYSREHGDLPIQPVVDGGEDYNFFDGGLPD-SITRLPNLRVFWAPNLNLEGIFPQNWELC---SKLEM 356 (1082)
Q Consensus 281 L~~L~l~~n~~~~~~~~~~~l~~~~~~~~~~~~n~~~~~~p~-~l~~l~~L~~L~l~~n~l~~~~~~~l~~l---~~L~~ 356 (1082)
+. .+..+++|++|++++|.+.+..|..+..+ ++|++
T Consensus 216 ----------------------------------------~~~l~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~L~~ 255 (310)
T 4glp_A 216 ----------------------------------------CAALAAAGVQPHSLDLSHNSLRATVNPSAPRCMWSSALNS 255 (310)
T ss_dssp ----------------------------------------HHHHHHHTCCCSSEECTTSCCCCCCCSCCSSCCCCTTCCC
T ss_pred ----------------------------------------HHHHHhcCCCCCEEECCCCCCCccchhhHHhccCcCcCCE
Confidence 11 13445666666666677777666666555 69999
Q ss_pred EEcCCccccCCCCccccCCCCCCEEecCCCcCcccCCCCcccCcccEEEecCCccee
Q 045553 357 LNLAHNFFTGQIPASLGNCKSLYFLDLSSNNLTGLLPEEVSVPCMAVFNVSQNLLSG 413 (1082)
Q Consensus 357 L~Ls~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~l~~L~~L~l~~N~l~~ 413 (1082)
|+|++|+|+ .+|..+. ++|+.|+|++|+|++. |....+++|+.|++++|+++.
T Consensus 256 L~Ls~N~l~-~lp~~~~--~~L~~L~Ls~N~l~~~-~~~~~l~~L~~L~L~~N~l~~ 308 (310)
T 4glp_A 256 LNLSFAGLE-QVPKGLP--AKLRVLDLSSNRLNRA-PQPDELPEVDNLTLDGNPFLV 308 (310)
T ss_dssp EECCSSCCC-SCCSCCC--SCCSCEECCSCCCCSC-CCTTSCCCCSCEECSSTTTSC
T ss_pred EECCCCCCC-chhhhhc--CCCCEEECCCCcCCCC-chhhhCCCccEEECcCCCCCC
Confidence 999999999 7788775 8999999999999976 444578999999999999863
No 344
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.85 E-value=3.8e-21 Score=206.11 Aligned_cols=140 Identities=14% Similarity=0.111 Sum_probs=88.8
Q ss_pred CcccCChhhcCCCCCCEEeCcCCCCCCCCCccccCCCCCCeEEccCcc-cccccCccccCCCCCcEEEccc-CcccccCC
Q 045553 122 FSGELPLEIGQLSLLEILDLSFNSFHGPIPPTLQNCSSLRLINLSGNQ-FNGTIPAFFGQSPGFQVVSLSF-NLLSGSVP 199 (1082)
Q Consensus 122 l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~-l~~~~p~~~~~l~~L~~L~L~~-N~l~~~~p 199 (1082)
++ .+|. +. ++|++|+|++|++++..+..|.++++|++|++++|+ ++...+..|.++++|++|+|++ |+++ .+|
T Consensus 23 l~-~ip~-~~--~~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~-~i~ 97 (239)
T 2xwt_C 23 IQ-RIPS-LP--PSTQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLT-YID 97 (239)
T ss_dssp CS-SCCC-CC--TTCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCC-EEC
T ss_pred cc-ccCC-CC--CcccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCee-EcC
Confidence 44 5665 33 377888888888876555577778888888888876 7655556777777777777776 7776 444
Q ss_pred cccccccccccEEEcccCccCCCCCccccCCCCcc---EEEccCC-cCCCCcCccccCCCCCC-EEeCCCCcCc
Q 045553 200 EEFGDNCVSLEHILLAANSLTGSIPPSLGNCTELR---SLLLSSN-MLQGDIPSSFGQLVNLE-VLDLSRNFLS 268 (1082)
Q Consensus 200 ~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~---~L~L~~N-~l~~~~p~~~~~l~~L~-~L~Ls~N~l~ 268 (1082)
...+..+++|++|++++|++++ +|. +..+++|+ +|++++| ++++..+..|..+++|+ +|++++|+++
T Consensus 98 ~~~f~~l~~L~~L~l~~n~l~~-lp~-~~~l~~L~~L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n~l~ 169 (239)
T 2xwt_C 98 PDALKELPLLKFLGIFNTGLKM-FPD-LTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFT 169 (239)
T ss_dssp TTSEECCTTCCEEEEEEECCCS-CCC-CTTCCBCCSEEEEEEESCTTCCEECTTTTTTTBSSEEEEECCSCCCC
T ss_pred HHHhCCCCCCCEEeCCCCCCcc-ccc-cccccccccccEEECCCCcchhhcCcccccchhcceeEEEcCCCCCc
Confidence 4333356666666666666663 443 55555555 6666666 55544444555555565 6666555555
No 345
>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*
Probab=99.84 E-value=3e-21 Score=211.38 Aligned_cols=154 Identities=14% Similarity=0.121 Sum_probs=124.3
Q ss_pred cHHHHHHHhcCccccceecccCceEEEEEEEcCCeEEEEEEeecCcc------------------ccHHHHHHHHHHHhc
Q 045553 792 TYENVVRATAGFNVQNCIGSGGFGATYKAEIIPGVVVAVKRLSVGRF------------------QGVQQFAAEIRTLGR 853 (1082)
Q Consensus 792 ~~~~~~~~~~~~~~~~~lg~G~~g~Vy~a~~~~~~~vavK~~~~~~~------------------~~~~~~~~e~~~l~~ 853 (1082)
....+......|.+.+.||+|+||.||+|...+|+.||||+++.... .....+.+|++++++
T Consensus 81 ~l~~~~~~~~~~~~~~~iG~G~~g~Vy~~~~~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~ 160 (282)
T 1zar_A 81 SLHRLVRSGKVDAIGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQK 160 (282)
T ss_dssp HHHHHHHTTSCSEEEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhCCeEEEecCEeccCCCceEEEEEeCCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHh
Confidence 34455556667888899999999999999887799999999964322 134568899999999
Q ss_pred cCCCceeeEeeeeccCCeEEEEEeecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCE
Q 045553 854 VQHPNLVTLIGYHVSEAEMFLIYNYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNI 933 (1082)
Q Consensus 854 l~h~niv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Ni 933 (1082)
++ | +++.+++. .+..++||||+++++|.+ +.. .....++.|++.|++|||+. +|+||||||+||
T Consensus 161 l~--~-~~v~~~~~-~~~~~lvmE~~~g~~L~~-l~~--------~~~~~i~~qi~~~l~~lH~~---giiHrDlkp~NI 224 (282)
T 1zar_A 161 LQ--G-LAVPKVYA-WEGNAVLMELIDAKELYR-VRV--------ENPDEVLDMILEEVAKFYHR---GIVHGDLSQYNV 224 (282)
T ss_dssp TT--T-SSSCCEEE-EETTEEEEECCCCEEGGG-CCC--------SCHHHHHHHHHHHHHHHHHT---TEECSCCSTTSE
T ss_pred cc--C-CCcCeEEe-ccceEEEEEecCCCcHHH-cch--------hhHHHHHHHHHHHHHHHHHC---CCEeCCCCHHHE
Confidence 99 4 56666543 356699999999999988 422 23457999999999999999 999999999999
Q ss_pred EEcCCCcEEEeecccceecCCCCCccccCcccCCCcccchhcc
Q 045553 934 LLDNNLNAYLSDFGLARLLGTSETHATTDVAGTFGYVAPEYAM 976 (1082)
Q Consensus 934 ll~~~~~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~ 976 (1082)
+++ ++.+||+|||+|+. +..|.|||++.
T Consensus 225 Ll~-~~~vkl~DFG~a~~--------------~~~~~a~e~l~ 252 (282)
T 1zar_A 225 LVS-EEGIWIIDFPQSVE--------------VGEEGWREILE 252 (282)
T ss_dssp EEE-TTEEEECCCTTCEE--------------TTSTTHHHHHH
T ss_pred EEE-CCcEEEEECCCCeE--------------CCCCCHHHHHH
Confidence 999 99999999999963 34578899874
No 346
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.84 E-value=2.6e-20 Score=207.42 Aligned_cols=208 Identities=21% Similarity=0.285 Sum_probs=128.6
Q ss_pred EEcccCCCcccCChhhcCCCCCCEEeCcCCCCCCCCCccccCCCCCCeEEccCcccccccCccccCCCCCcEEEcccCcc
Q 045553 115 LLLAFNGFSGELPLEIGQLSLLEILDLSFNSFHGPIPPTLQNCSSLRLINLSGNQFNGTIPAFFGQSPGFQVVSLSFNLL 194 (1082)
Q Consensus 115 L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l 194 (1082)
+.+..+.+++.++ +..+++|++|++++|.++ .+| .+..+++|++|+|++|++++..+ +..+++|++|+|++|++
T Consensus 24 ~~l~~~~~~~~~~--~~~l~~L~~L~l~~~~i~-~l~-~~~~l~~L~~L~L~~n~i~~~~~--~~~l~~L~~L~L~~n~l 97 (308)
T 1h6u_A 24 IAAGKSNVTDTVT--QADLDGITTLSAFGTGVT-TIE-GVQYLNNLIGLELKDNQITDLAP--LKNLTKITELELSGNPL 97 (308)
T ss_dssp HHTTCSSTTSEEC--HHHHHTCCEEECTTSCCC-CCT-TGGGCTTCCEEECCSSCCCCCGG--GTTCCSCCEEECCSCCC
T ss_pred HHhCCCCcCceec--HHHcCCcCEEEeeCCCcc-Cch-hhhccCCCCEEEccCCcCCCChh--HccCCCCCEEEccCCcC
Confidence 3455566654332 456788888889888888 455 58888888888888888885444 77888888888888887
Q ss_pred cccCCcccccccccccEEEcccCccCCCCCccccCCCCccEEEccCCcCCCCcCccccCCCCCCEEeCCCCcCcccCCcc
Q 045553 195 SGSVPEEFGDNCVSLEHILLAANSLTGSIPPSLGNCTELRSLLLSSNMLQGDIPSSFGQLVNLEVLDLSRNFLSGIVPSE 274 (1082)
Q Consensus 195 ~~~~p~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~ 274 (1082)
+ .++ .+ ..+++|++|++++|++++ ++ .+..+++|++|++++|++++..+ +..+++|++|++++|++++..+
T Consensus 98 ~-~~~-~~-~~l~~L~~L~l~~n~l~~-~~-~l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~~~~-- 168 (308)
T 1h6u_A 98 K-NVS-AI-AGLQSIKTLDLTSTQITD-VT-PLAGLSNLQVLYLDLNQITNISP--LAGLTNLQYLSIGNAQVSDLTP-- 168 (308)
T ss_dssp S-CCG-GG-TTCTTCCEEECTTSCCCC-CG-GGTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--
T ss_pred C-Cch-hh-cCCCCCCEEECCCCCCCC-ch-hhcCCCCCCEEECCCCccCcCcc--ccCCCCccEEEccCCcCCCChh--
Confidence 7 333 22 245666666666666653 22 25555666666666666653322 5555555566665555553211
Q ss_pred ccCCCCCcEEEeccccCCcccccCCCCCCcccccCCCcccccCCCCCccccCCCCCcEEEcCCCcccCCCCcccccccCC
Q 045553 275 LGMCKQLKVLVLRNDYGPLYSREHGDLPIQPVVDGGEDYNFFDGGLPDSITRLPNLRVFWAPNLNLEGIFPQNWELCSKL 354 (1082)
Q Consensus 275 l~~l~~L~~L~l~~n~~~~~~~~~~~l~~~~~~~~~~~~n~~~~~~p~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L 354 (1082)
+. .+++|+.|++++|.+.+..+ +..+++|
T Consensus 169 l~-------------------------------------------------~l~~L~~L~l~~n~l~~~~~--l~~l~~L 197 (308)
T 1h6u_A 169 LA-------------------------------------------------NLSKLTTLKADDNKISDISP--LASLPNL 197 (308)
T ss_dssp GT-------------------------------------------------TCTTCCEEECCSSCCCCCGG--GGGCTTC
T ss_pred hc-------------------------------------------------CCCCCCEEECCCCccCcChh--hcCCCCC
Confidence 33 34444444445555544433 5566667
Q ss_pred CeEEcCCccccCCCCccccCCCCCCEEecCCCcCcc
Q 045553 355 EMLNLAHNFFTGQIPASLGNCKSLYFLDLSSNNLTG 390 (1082)
Q Consensus 355 ~~L~Ls~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~ 390 (1082)
++|+|++|++++.. .+..+++|+.|+|++|++++
T Consensus 198 ~~L~L~~N~l~~~~--~l~~l~~L~~L~l~~N~i~~ 231 (308)
T 1h6u_A 198 IEVHLKNNQISDVS--PLANTSNLFIVTLTNQTITN 231 (308)
T ss_dssp CEEECTTSCCCBCG--GGTTCTTCCEEEEEEEEEEC
T ss_pred CEEEccCCccCccc--cccCCCCCCEEEccCCeeec
Confidence 77777777776433 26667777777777777664
No 347
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.83 E-value=2.9e-20 Score=207.04 Aligned_cols=169 Identities=23% Similarity=0.327 Sum_probs=142.5
Q ss_pred ccCCCCCCEEEcccCCCcccCChhhcCCCCCCEEeCcCCCCCCCCCccccCCCCCCeEEccCcccccccCccccCCCCCc
Q 045553 106 IGDLTQLRVLLLAFNGFSGELPLEIGQLSLLEILDLSFNSFHGPIPPTLQNCSSLRLINLSGNQFNGTIPAFFGQSPGFQ 185 (1082)
Q Consensus 106 l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~ 185 (1082)
+.++++|++|++++|.++ .+| .+..+++|++|+|++|.+++ ++. +.++++|++|+|++|++++. ..+..+++|+
T Consensus 37 ~~~l~~L~~L~l~~~~i~-~l~-~~~~l~~L~~L~L~~n~i~~-~~~-~~~l~~L~~L~L~~n~l~~~--~~~~~l~~L~ 110 (308)
T 1h6u_A 37 QADLDGITTLSAFGTGVT-TIE-GVQYLNNLIGLELKDNQITD-LAP-LKNLTKITELELSGNPLKNV--SAIAGLQSIK 110 (308)
T ss_dssp HHHHHTCCEEECTTSCCC-CCT-TGGGCTTCCEEECCSSCCCC-CGG-GTTCCSCCEEECCSCCCSCC--GGGTTCTTCC
T ss_pred HHHcCCcCEEEeeCCCcc-Cch-hhhccCCCCEEEccCCcCCC-Chh-HccCCCCCEEEccCCcCCCc--hhhcCCCCCC
Confidence 567899999999999998 466 68999999999999999995 554 99999999999999999953 3689999999
Q ss_pred EEEcccCcccccCCcccccccccccEEEcccCccCCCCCccccCCCCccEEEccCCcCCCCcCccccCCCCCCEEeCCCC
Q 045553 186 VVSLSFNLLSGSVPEEFGDNCVSLEHILLAANSLTGSIPPSLGNCTELRSLLLSSNMLQGDIPSSFGQLVNLEVLDLSRN 265 (1082)
Q Consensus 186 ~L~L~~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N 265 (1082)
+|+|++|++++ ++. + ..+++|++|++++|++++..+ +..+++|++|++++|++++..+ +..+++|++|++++|
T Consensus 111 ~L~l~~n~l~~-~~~-l-~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n 183 (308)
T 1h6u_A 111 TLDLTSTQITD-VTP-L-AGLSNLQVLYLDLNQITNISP--LAGLTNLQYLSIGNAQVSDLTP--LANLSKLTTLKADDN 183 (308)
T ss_dssp EEECTTSCCCC-CGG-G-TTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSS
T ss_pred EEECCCCCCCC-chh-h-cCCCCCCEEECCCCccCcCcc--ccCCCCccEEEccCCcCCCChh--hcCCCCCCEEECCCC
Confidence 99999999984 554 3 479999999999999996543 8899999999999999996443 999999999999999
Q ss_pred cCcccCCccccCCCCCcEEEeccc
Q 045553 266 FLSGIVPSELGMCKQLKVLVLRND 289 (1082)
Q Consensus 266 ~l~~~~p~~l~~l~~L~~L~l~~n 289 (1082)
++++..+ +..+++|++|++++|
T Consensus 184 ~l~~~~~--l~~l~~L~~L~L~~N 205 (308)
T 1h6u_A 184 KISDISP--LASLPNLIEVHLKNN 205 (308)
T ss_dssp CCCCCGG--GGGCTTCCEEECTTS
T ss_pred ccCcChh--hcCCCCCCEEEccCC
Confidence 9985433 555555555555543
No 348
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.83 E-value=4.9e-20 Score=209.35 Aligned_cols=240 Identities=16% Similarity=0.097 Sum_probs=144.1
Q ss_pred CEEEcccCCCcccCChhhcCCCCCCEEeCcCCCCCCCCCccccCCCCCCeEEccCcccccccC-ccccCCCCCcE-EEcc
Q 045553 113 RVLLLAFNGFSGELPLEIGQLSLLEILDLSFNSFHGPIPPTLQNCSSLRLINLSGNQFNGTIP-AFFGQSPGFQV-VSLS 190 (1082)
Q Consensus 113 ~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~-L~L~ 190 (1082)
++++.++++++ .+|..+ .+++++|+|++|+|+...+..|.++++|++|+|++|++.+.+| .+|.++++|++ +.++
T Consensus 12 ~~v~C~~~~Lt-~iP~~l--~~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~~ 88 (350)
T 4ay9_X 12 RVFLCQESKVT-EIPSDL--PRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEK 88 (350)
T ss_dssp TEEEEESTTCC-SCCTTC--CTTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEEE
T ss_pred CEEEecCCCCC-ccCcCc--CCCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhccc
Confidence 56777777777 667655 3577888888888874444567778888888888887765554 46677776654 5556
Q ss_pred cCcccccCCcccccccccccEEEcccCccCCCCCccccCCCCccEEEccC-CcCCCCcCccccCCC-CCCEEeCCCCcCc
Q 045553 191 FNLLSGSVPEEFGDNCVSLEHILLAANSLTGSIPPSLGNCTELRSLLLSS-NMLQGDIPSSFGQLV-NLEVLDLSRNFLS 268 (1082)
Q Consensus 191 ~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~-N~l~~~~p~~~~~l~-~L~~L~Ls~N~l~ 268 (1082)
.|+++ .++...+..+++|++|++++|+++...+..+....++..|++.+ |++....+..|..+. .++.|+|++|+|+
T Consensus 89 ~N~l~-~l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~l~~~~~i~~l~~~~f~~~~~~l~~L~L~~N~i~ 167 (350)
T 4ay9_X 89 ANNLL-YINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQ 167 (350)
T ss_dssp ETTCC-EECTTSBCCCTTCCEEEEEEECCSSCCCCTTCCBSSCEEEEEESCTTCCEECTTSSTTSBSSCEEEECCSSCCC
T ss_pred CCccc-ccCchhhhhccccccccccccccccCCchhhcccchhhhhhhccccccccccccchhhcchhhhhhcccccccc
Confidence 67776 44444444567777777777777755555555666666666654 455544444555553 4666777777666
Q ss_pred ccCCccccCCCCCcEEEeccccCCcccccCCCCCCcccccCCCcccccCCCCCccccCCCCCcEEEcCC-CcccCCCCcc
Q 045553 269 GIVPSELGMCKQLKVLVLRNDYGPLYSREHGDLPIQPVVDGGEDYNFFDGGLPDSITRLPNLRVFWAPN-LNLEGIFPQN 347 (1082)
Q Consensus 269 ~~~p~~l~~l~~L~~L~l~~n~~~~~~~~~~~l~~~~~~~~~~~~n~~~~~~p~~l~~l~~L~~L~l~~-n~l~~~~~~~ 347 (1082)
.+ |....... +|+.|++.+ |.+..+.++.
T Consensus 168 ~i-~~~~f~~~-------------------------------------------------~L~~l~l~~~n~l~~i~~~~ 197 (350)
T 4ay9_X 168 EI-HNSAFNGT-------------------------------------------------QLDELNLSDNNNLEELPNDV 197 (350)
T ss_dssp EE-CTTSSTTE-------------------------------------------------EEEEEECTTCTTCCCCCTTT
T ss_pred CC-Chhhcccc-------------------------------------------------chhHHhhccCCcccCCCHHH
Confidence 33 32222333 444555542 4444555556
Q ss_pred cccccCCCeEEcCCccccCCCCccccCCCCCCEEecCCCcCcccCCCCcccCcccEEEecCC
Q 045553 348 WELCSKLEMLNLAHNFFTGQIPASLGNCKSLYFLDLSSNNLTGLLPEEVSVPCMAVFNVSQN 409 (1082)
Q Consensus 348 l~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~l~~L~~L~l~~N 409 (1082)
|..+++|++|||++|+|+ .+|.. .+.+|+.|.+.++.--..+|..-.+++|+.++++++
T Consensus 198 f~~l~~L~~LdLs~N~l~-~lp~~--~~~~L~~L~~l~~~~l~~lP~l~~l~~L~~l~l~~~ 256 (350)
T 4ay9_X 198 FHGASGPVILDISRTRIH-SLPSY--GLENLKKLRARSTYNLKKLPTLEKLVALMEASLTYP 256 (350)
T ss_dssp TTTEECCSEEECTTSCCC-CCCSS--SCTTCCEEECTTCTTCCCCCCTTTCCSCCEEECSCH
T ss_pred hccCcccchhhcCCCCcC-ccChh--hhccchHhhhccCCCcCcCCCchhCcChhhCcCCCC
Confidence 677777777777777777 33332 233444444444433334555556677777776544
No 349
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.83 E-value=2.1e-20 Score=212.44 Aligned_cols=191 Identities=16% Similarity=0.091 Sum_probs=149.9
Q ss_pred CCccccccccccCCCCCCEEEcccCCCcccCChhhcCCCCCCEEeCcCCCCCCCCC-ccccCCCCCCe-EEccCcccccc
Q 045553 96 DKLSGNLSRAIGDLTQLRVLLLAFNGFSGELPLEIGQLSLLEILDLSFNSFHGPIP-PTLQNCSSLRL-INLSGNQFNGT 173 (1082)
Q Consensus 96 ~~l~g~l~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p-~~l~~l~~L~~-L~Ls~N~l~~~ 173 (1082)
++++ .+|..+ .+++++|+|++|+|+...+.+|.++++|++|+|++|++.+.+| ..|.++++|++ +.+++|+++..
T Consensus 19 ~~Lt-~iP~~l--~~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~~~N~l~~l 95 (350)
T 4ay9_X 19 SKVT-EIPSDL--PRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKANNLLYI 95 (350)
T ss_dssp TTCC-SCCTTC--CTTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEEEETTCCEE
T ss_pred CCCC-ccCcCc--CCCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhcccCCccccc
Confidence 4444 466666 3689999999999995555689999999999999999976665 46899999875 67778999988
Q ss_pred cCccccCCCCCcEEEcccCcccccCCcccccccccccEEEccc-CccCCCCCccccCCC-CccEEEccCCcCCCCcCccc
Q 045553 174 IPAFFGQSPGFQVVSLSFNLLSGSVPEEFGDNCVSLEHILLAA-NSLTGSIPPSLGNCT-ELRSLLLSSNMLQGDIPSSF 251 (1082)
Q Consensus 174 ~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~L~~-N~l~~~~~~~~~~l~-~L~~L~L~~N~l~~~~p~~~ 251 (1082)
.|..|..+++|++|++++|++. .+|...+....++..|++.+ |++....+..|..+. .++.|+|++|+|+. +|...
T Consensus 96 ~~~~f~~l~~L~~L~l~~n~l~-~~~~~~~~~~~~l~~l~l~~~~~i~~l~~~~f~~~~~~l~~L~L~~N~i~~-i~~~~ 173 (350)
T 4ay9_X 96 NPEAFQNLPNLQYLLISNTGIK-HLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQE-IHNSA 173 (350)
T ss_dssp CTTSBCCCTTCCEEEEEEECCS-SCCCCTTCCBSSCEEEEEESCTTCCEECTTSSTTSBSSCEEEECCSSCCCE-ECTTS
T ss_pred Cchhhhhccccccccccccccc-cCCchhhcccchhhhhhhccccccccccccchhhcchhhhhhccccccccC-CChhh
Confidence 8899999999999999999999 55555444567888999976 567755566777765 68999999999994 55555
Q ss_pred cCCCCCCEEeCCC-CcCcccCCccccCCCCCcEEEeccccC
Q 045553 252 GQLVNLEVLDLSR-NFLSGIVPSELGMCKQLKVLVLRNDYG 291 (1082)
Q Consensus 252 ~~l~~L~~L~Ls~-N~l~~~~p~~l~~l~~L~~L~l~~n~~ 291 (1082)
...++|++|++++ |.++.+.+..|..+++|++|++++|.+
T Consensus 174 f~~~~L~~l~l~~~n~l~~i~~~~f~~l~~L~~LdLs~N~l 214 (350)
T 4ay9_X 174 FNGTQLDELNLSDNNNLEELPNDVFHGASGPVILDISRTRI 214 (350)
T ss_dssp STTEEEEEEECTTCTTCCCCCTTTTTTEECCSEEECTTSCC
T ss_pred ccccchhHHhhccCCcccCCCHHHhccCcccchhhcCCCCc
Confidence 5667899999985 667644445677777777777776543
No 350
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.83 E-value=2.2e-20 Score=196.96 Aligned_cols=157 Identities=24% Similarity=0.281 Sum_probs=144.8
Q ss_pred eEEEccCCcccccCCccccccCCcccEEEccCCcccccCc-cccCCCCCCCEEEccCCCCCCCCcccccCCCCCCEEEcC
Q 045553 521 LIFDIGNNKLIGEVPSDMGSHCKCMKFLSMAGNEFVGLIP-QSFTNFDSLRNLNLSRNHLQGPLPSYINKMEDLKFLSLS 599 (1082)
Q Consensus 521 ~~l~l~~n~l~~~ip~~~~~~~~~L~~L~L~~N~i~~~~~-~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls 599 (1082)
..+++++|++. .+|..++. .+++|+|++|+|+++.+ ..|..+++|++|+|++|+|+++.+..|..+++|++|+|+
T Consensus 14 ~~l~~s~n~l~-~iP~~~~~---~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls 89 (220)
T 2v70_A 14 TTVDCSNQKLN-KIPEHIPQ---YTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLT 89 (220)
T ss_dssp TEEECCSSCCS-SCCSCCCT---TCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECC
T ss_pred CEeEeCCCCcc-cCccCCCC---CCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECC
Confidence 48999999998 78987764 47899999999998865 568999999999999999998888899999999999999
Q ss_pred CCcCCccCchhhhcCcccchhhccCcccCCCCCccccCCcccceecccCcccCCCCCCCCCCCCcccEEeccCCccccCC
Q 045553 600 LNNFTGAIPWELTQLASLEVLELSANSLSGEIPSEFSKLEHLNVLRLDHNNLTGRIPPGFGTRSSLSIFDVSFNNLSGSA 679 (1082)
Q Consensus 600 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~l~ls~N~l~~~~ 679 (1082)
+|+|++..|..|.++++|++|+|++|+|++..|..|..+++|++|+|++|+|++..|..|..+++|+.|++++|+|+|.+
T Consensus 90 ~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c 169 (220)
T 2v70_A 90 SNRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPFNCNC 169 (220)
T ss_dssp SSCCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEEECCSCCEECSG
T ss_pred CCccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCEEEecCcCCcCCC
Confidence 99999888888999999999999999999998999999999999999999999998999999999999999988888665
Q ss_pred CC
Q 045553 680 PR 681 (1082)
Q Consensus 680 p~ 681 (1082)
+.
T Consensus 170 ~l 171 (220)
T 2v70_A 170 YL 171 (220)
T ss_dssp GG
T ss_pred ch
Confidence 53
No 351
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.83 E-value=3.4e-20 Score=194.07 Aligned_cols=163 Identities=23% Similarity=0.205 Sum_probs=143.1
Q ss_pred CCCCEEEcccCCCcccCChhhcCCCCCCEEeCcCCCCCCCCCccccCCCCCCeEEccCcccccccCccccCCCCCcEEEc
Q 045553 110 TQLRVLLLAFNGFSGELPLEIGQLSLLEILDLSFNSFHGPIPPTLQNCSSLRLINLSGNQFNGTIPAFFGQSPGFQVVSL 189 (1082)
Q Consensus 110 ~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 189 (1082)
++|++|+|++|++++..+..|+.+++|++|+|++|++++..+..|.++++|++|+|++|++++..+..|..+++|++|+|
T Consensus 28 ~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L 107 (208)
T 2o6s_A 28 AQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTNQLQSLPNGVFDKLTQLKELAL 107 (208)
T ss_dssp TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCCCCCcCEEECCCCcCCccCHhHhcCccCCCEEEc
Confidence 58899999999999777777899999999999999999666667899999999999999999777778899999999999
Q ss_pred ccCcccccCCcccccccccccEEEcccCccCCCCCccccCCCCccEEEccCCcCCCCcCccccCCCCCCEEeCCCCcCcc
Q 045553 190 SFNLLSGSVPEEFGDNCVSLEHILLAANSLTGSIPPSLGNCTELRSLLLSSNMLQGDIPSSFGQLVNLEVLDLSRNFLSG 269 (1082)
Q Consensus 190 ~~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 269 (1082)
++|+++ .+|...+..+++|++|++++|++++..+..+..+++|++|++++|.+.+ .+++|++|+++.|+++|
T Consensus 108 ~~N~l~-~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~-------~~~~l~~L~~~~n~~~g 179 (208)
T 2o6s_A 108 NTNQLQ-SLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDC-------TCPGIRYLSEWINKHSG 179 (208)
T ss_dssp CSSCCC-CCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCC-------CTTTTHHHHHHHHHCTT
T ss_pred CCCcCc-ccCHhHhccCCcCCEEECCCCccceeCHHHhccCCCccEEEecCCCeec-------CCCCHHHHHHHHHhCCc
Confidence 999999 5565555578999999999999997777778999999999999998874 45689999999999999
Q ss_pred cCCccccCCCC
Q 045553 270 IVPSELGMCKQ 280 (1082)
Q Consensus 270 ~~p~~l~~l~~ 280 (1082)
.+|..++.++.
T Consensus 180 ~ip~~~~~l~~ 190 (208)
T 2o6s_A 180 VVRNSAGSVAP 190 (208)
T ss_dssp TBBCTTSSBCT
T ss_pred eeeccCccccC
Confidence 99998887654
No 352
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.82 E-value=3.2e-20 Score=195.72 Aligned_cols=152 Identities=24% Similarity=0.326 Sum_probs=141.6
Q ss_pred eEEEccCCcccccCCccccccCCcccEEEccCCcccccCccccCCCCCCCEEEccCCCCCCCCcccccCCCCCCEEEcCC
Q 045553 521 LIFDIGNNKLIGEVPSDMGSHCKCMKFLSMAGNEFVGLIPQSFTNFDSLRNLNLSRNHLQGPLPSYINKMEDLKFLSLSL 600 (1082)
Q Consensus 521 ~~l~l~~n~l~~~ip~~~~~~~~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~ 600 (1082)
..+++++|++. .+|..++ ++|++|+|++|+|+++.+..|..+++|++|+|++|+|++..|..|.++++|++|+|++
T Consensus 14 ~~v~c~~~~l~-~iP~~l~---~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~ 89 (220)
T 2v9t_B 14 NIVDCRGKGLT-EIPTNLP---ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYG 89 (220)
T ss_dssp TEEECTTSCCS-SCCSSCC---TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCS
T ss_pred CEEEcCCCCcC-cCCCccC---cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCC
Confidence 57999999988 8898876 5699999999999999999999999999999999999988899999999999999999
Q ss_pred CcCCccCchhhhcCcccchhhccCcccCCCCCccccCCcccceecccCcccCCCCCCCCCCCCcccEEeccCCccc
Q 045553 601 NNFTGAIPWELTQLASLEVLELSANSLSGEIPSEFSKLEHLNVLRLDHNNLTGRIPPGFGTRSSLSIFDVSFNNLS 676 (1082)
Q Consensus 601 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~l~ls~N~l~ 676 (1082)
|+|++..+..|.++++|++|+|++|+|++..|..|..+++|+.|+|++|+|++..+..|..+++|+.|++++|+|.
T Consensus 90 N~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~ 165 (220)
T 2v9t_B 90 NKITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFI 165 (220)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCEE
T ss_pred CcCCccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHhCCCCCCEEEeCCCCcC
Confidence 9999777777899999999999999999988999999999999999999999888888999999999999777665
No 353
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.81 E-value=2.6e-20 Score=222.45 Aligned_cols=195 Identities=24% Similarity=0.335 Sum_probs=161.8
Q ss_pred CCCCCCCCCCCc-----eeeee-EeeCCCCCeeeeecCCCccccccccCCCCCCCCCCCCcccCcCcccccccccCcccC
Q 045553 19 TSNWNPKDTDSC-----SWHGV-TCDPLSGRVTSLNLSSNLSRTSCSLLSLPPAAGPGGNFSFHFPCLQLHQHDRGNINS 92 (1082)
Q Consensus 19 ~~~W~~~~~~~c-----~w~gv-~C~~~~~~v~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (1082)
+.+|.. +.++| .|.|+ .|. .++++.|+|++|
T Consensus 33 l~~W~~-~~~~~~~~~~~~~~l~~C~--~~~L~~L~Ls~n---------------------------------------- 69 (571)
T 3cvr_A 33 WDKWEK-QALPGENRNEAVSLLKECL--INQFSELQLNRL---------------------------------------- 69 (571)
T ss_dssp HHHHHT-TCCTTCCHHHHHHHHHHHH--HTTCSEEECCSS----------------------------------------
T ss_pred HHHHhc-cCCccccccchhhhccccc--cCCccEEEeCCC----------------------------------------
Confidence 456864 46778 79999 796 357899999863
Q ss_pred CCCCCccccccccccCCCCCCEEEcccCCCcccCChhhcCCCCCCEEeCcCCCCCCCCCccccCCCCCCeEEccCccccc
Q 045553 93 NSSDKLSGNLSRAIGDLTQLRVLLLAFNGFSGELPLEIGQLSLLEILDLSFNSFHGPIPPTLQNCSSLRLINLSGNQFNG 172 (1082)
Q Consensus 93 ~~~~~l~g~l~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~ 172 (1082)
++.+ +|+.+ +++|++|+|++|+|+ .+| ..+++|++|+|++|.|++ +|. +.+ +|++|+|++|+|++
T Consensus 70 ----~L~~-lp~~l--~~~L~~L~Ls~N~l~-~ip---~~l~~L~~L~Ls~N~l~~-ip~-l~~--~L~~L~Ls~N~l~~ 134 (571)
T 3cvr_A 70 ----NLSS-LPDNL--PPQITVLEITQNALI-SLP---ELPASLEYLDACDNRLST-LPE-LPA--SLKHLDVDNNQLTM 134 (571)
T ss_dssp ----CCSC-CCSCC--CTTCSEEECCSSCCS-CCC---CCCTTCCEEECCSSCCSC-CCC-CCT--TCCEEECCSSCCSC
T ss_pred ----CCCc-cCHhH--cCCCCEEECcCCCCc-ccc---cccCCCCEEEccCCCCCC-cch-hhc--CCCEEECCCCcCCC
Confidence 3443 55555 378999999999999 788 568999999999999996 787 766 99999999999996
Q ss_pred ccCccccCCCCCcEEEcccCcccccCCcccccccccccEEEcccCccCCCCCccccCCCCccEEEccCCcCCCCcCcccc
Q 045553 173 TIPAFFGQSPGFQVVSLSFNLLSGSVPEEFGDNCVSLEHILLAANSLTGSIPPSLGNCTELRSLLLSSNMLQGDIPSSFG 252 (1082)
Q Consensus 173 ~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~ 252 (1082)
+|. .+++|+.|+|++|+|++ +|. .+++|++|+|++|+|++ +|. |. ++|+.|+|++|+|+ .+|. |.
T Consensus 135 -lp~---~l~~L~~L~Ls~N~l~~-lp~----~l~~L~~L~Ls~N~L~~-lp~-l~--~~L~~L~Ls~N~L~-~lp~-~~ 199 (571)
T 3cvr_A 135 -LPE---LPALLEYINADNNQLTM-LPE----LPTSLEVLSVRNNQLTF-LPE-LP--ESLEALDVSTNLLE-SLPA-VP 199 (571)
T ss_dssp -CCC---CCTTCCEEECCSSCCSC-CCC----CCTTCCEEECCSSCCSC-CCC-CC--TTCCEEECCSSCCS-SCCC-CC
T ss_pred -CCC---cCccccEEeCCCCccCc-CCC----cCCCcCEEECCCCCCCC-cch-hh--CCCCEEECcCCCCC-chhh-HH
Confidence 666 68999999999999994 776 46899999999999996 776 66 89999999999999 6777 65
Q ss_pred CCCCC-------CEEeCCCCcCcccCCccccCCCCCcEEEeccc
Q 045553 253 QLVNL-------EVLDLSRNFLSGIVPSELGMCKQLKVLVLRND 289 (1082)
Q Consensus 253 ~l~~L-------~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~n 289 (1082)
. +| +.|+|++|+|+ .+|..+..+++|+.|++++|
T Consensus 200 ~--~L~~~~~~L~~L~Ls~N~l~-~lp~~l~~l~~L~~L~L~~N 240 (571)
T 3cvr_A 200 V--RNHHSEETEIFFRCRENRIT-HIPENILSLDPTCTIILEDN 240 (571)
T ss_dssp ----------CCEEEECCSSCCC-CCCGGGGGSCTTEEEECCSS
T ss_pred H--hhhcccccceEEecCCCcce-ecCHHHhcCCCCCEEEeeCC
Confidence 4 77 99999999998 57888888999999999885
No 354
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.81 E-value=1.9e-20 Score=213.70 Aligned_cols=176 Identities=23% Similarity=0.273 Sum_probs=153.1
Q ss_pred eEEEccCCcccccCCccccccCCcccEEEccCCcccccCccccC-CCCCCCEEEccCCCCCCCCcccccCCCCCCEEEcC
Q 045553 521 LIFDIGNNKLIGEVPSDMGSHCKCMKFLSMAGNEFVGLIPQSFT-NFDSLRNLNLSRNHLQGPLPSYINKMEDLKFLSLS 599 (1082)
Q Consensus 521 ~~l~l~~n~l~~~ip~~~~~~~~~L~~L~L~~N~i~~~~~~~~~-~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls 599 (1082)
.++++++|++. .+|..++. .++.|+|++|+|+++.+..|. ++++|++|+|++|+|+++.+..|..+++|++|+|+
T Consensus 21 ~~l~c~~~~l~-~iP~~~~~---~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls 96 (361)
T 2xot_A 21 NILSCSKQQLP-NVPQSLPS---YTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLS 96 (361)
T ss_dssp TEEECCSSCCS-SCCSSCCT---TCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECC
T ss_pred CEEEeCCCCcC-ccCccCCC---CCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECC
Confidence 58999999998 78988764 489999999999999999898 99999999999999998888899999999999999
Q ss_pred CCcCCccCchhhhcCcccchhhccCcccCCCCCccccCCcccceecccCcccCCCCCCCC---CCCCcccEEeccCCccc
Q 045553 600 LNNFTGAIPWELTQLASLEVLELSANSLSGEIPSEFSKLEHLNVLRLDHNNLTGRIPPGF---GTRSSLSIFDVSFNNLS 676 (1082)
Q Consensus 600 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~---~~l~~L~~l~ls~N~l~ 676 (1082)
+|+|++..+..|.++++|++|+|++|+|++..|..|..+++|+.|+|++|+|++..+..| ..+++|+.|+|++|+|+
T Consensus 97 ~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~~l~~L~~L~L~~N~l~ 176 (361)
T 2xot_A 97 SNHLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQISRFPVELIKDGNKLPKLMLLDLSSNKLK 176 (361)
T ss_dssp SSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCSCCGGGTC----CTTCCEEECCSSCCC
T ss_pred CCcCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCCeeCHHHhcCcccCCcCCEEECCCCCCC
Confidence 999998888889999999999999999998889999999999999999999996555555 57999999999999998
Q ss_pred cCCCCCc--c-----cccccCCCCCCCCCCCC
Q 045553 677 GSAPRNS--L-----IKCENVQGNPNLQLCHT 701 (1082)
Q Consensus 677 ~~~p~~~--~-----~~~~~~~~Np~~c~c~~ 701 (1082)
+ +|... . .....+.+|||.|+|..
T Consensus 177 ~-l~~~~~~~l~~~~l~~l~l~~N~~~C~C~l 207 (361)
T 2xot_A 177 K-LPLTDLQKLPAWVKNGLYLHNNPLECDCKL 207 (361)
T ss_dssp C-CCHHHHHHSCHHHHTTEECCSSCEECCHHH
T ss_pred c-cCHHHhhhccHhhcceEEecCCCccCCcCc
Confidence 5 44221 1 24568899999999973
No 355
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.81 E-value=1.5e-19 Score=192.07 Aligned_cols=155 Identities=25% Similarity=0.303 Sum_probs=143.6
Q ss_pred eEEEccCCcccccCCccccccCCcccEEEccCCcccccCccccCCCCCCCEEEccCCCCCCCCcccccCCCCCCEEEcCC
Q 045553 521 LIFDIGNNKLIGEVPSDMGSHCKCMKFLSMAGNEFVGLIPQSFTNFDSLRNLNLSRNHLQGPLPSYINKMEDLKFLSLSL 600 (1082)
Q Consensus 521 ~~l~l~~n~l~~~ip~~~~~~~~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~ 600 (1082)
..++++++++. .+|..++ ++|++|+|++|+|+++.|..|.++++|++|+|++|+|+.+.+..|..+++|+.|+|++
T Consensus 22 ~~v~c~~~~l~-~ip~~~~---~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~ 97 (229)
T 3e6j_A 22 TTVDCRSKRHA-SVPAGIP---TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVLDLGT 97 (229)
T ss_dssp TEEECTTSCCS-SCCSCCC---TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CEeEccCCCcC-ccCCCCC---CCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhcccCCCcCEEECCC
Confidence 47999999987 8998776 6699999999999999999999999999999999999977778899999999999999
Q ss_pred CcCCccCchhhhcCcccchhhccCcccCCCCCccccCCcccceecccCcccCCCCCCCCCCCCcccEEeccCCccccCCC
Q 045553 601 NNFTGAIPWELTQLASLEVLELSANSLSGEIPSEFSKLEHLNVLRLDHNNLTGRIPPGFGTRSSLSIFDVSFNNLSGSAP 680 (1082)
Q Consensus 601 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~l~ls~N~l~~~~p 680 (1082)
|+|++..+..|..+++|++|+|++|+|+ .+|..+..+++|++|+|++|+|++..+..|..+++|+.|++++|+++|.++
T Consensus 98 N~l~~l~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~ 176 (229)
T 3e6j_A 98 NQLTVLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQNQLKSIPHGAFDRLSSLTHAYLFGNPWDCECR 176 (229)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCCC-SCCTTGGGCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCBCTTBG
T ss_pred CcCCccChhHhCcchhhCeEeccCCccc-ccCcccccCCCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCCccCCcc
Confidence 9999888888999999999999999999 788999999999999999999998877889999999999999888887665
No 356
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.80 E-value=3.6e-19 Score=186.26 Aligned_cols=148 Identities=23% Similarity=0.265 Sum_probs=74.4
Q ss_pred CEEEcccCCCcccCChhhcCCCCCCEEeCcCCCCCCCCCccccCCCCCCeEEccCcccccccCccccCCCCCcEEEcccC
Q 045553 113 RVLLLAFNGFSGELPLEIGQLSLLEILDLSFNSFHGPIPPTLQNCSSLRLINLSGNQFNGTIPAFFGQSPGFQVVSLSFN 192 (1082)
Q Consensus 113 ~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N 192 (1082)
+.++.++++++ .+|..+ .++|++|+|++|.+++..+..|.++++|++|+|++|++++..+..|..+++|++|+|++|
T Consensus 10 ~~v~c~~~~l~-~~p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n 86 (208)
T 2o6s_A 10 TTVECYSQGRT-SVPTGI--PAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTN 86 (208)
T ss_dssp TEEECCSSCCS-SCCSCC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEecCCCcc-CCCCCC--CCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCCCCCcCEEECCCC
Confidence 34555555555 344332 245555555555555444444555555555555555555443344444455555544444
Q ss_pred cccccCCcccccccccccEEEcccCccCCCCCccccCCCCccEEEccCCcCCCCcCccccCCCCCCEEeCCCCcCcccCC
Q 045553 193 LLSGSVPEEFGDNCVSLEHILLAANSLTGSIPPSLGNCTELRSLLLSSNMLQGDIPSSFGQLVNLEVLDLSRNFLSGIVP 272 (1082)
Q Consensus 193 ~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p 272 (1082)
+++ +..+..+.++++|++|+|++|++++..+..|..+++|++|++++|++++..+
T Consensus 87 ~l~-------------------------~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~ 141 (208)
T 2o6s_A 87 QLQ-------------------------SLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPD 141 (208)
T ss_dssp CCC-------------------------CCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCT
T ss_pred cCC-------------------------ccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEECCCCccceeCH
Confidence 444 3333334455555555555555554444445555555555555555554433
Q ss_pred ccccCCCCCcEEEecc
Q 045553 273 SELGMCKQLKVLVLRN 288 (1082)
Q Consensus 273 ~~l~~l~~L~~L~l~~ 288 (1082)
..+..+++|++|++++
T Consensus 142 ~~~~~l~~L~~L~l~~ 157 (208)
T 2o6s_A 142 GVFDRLTSLQYIWLHD 157 (208)
T ss_dssp TTTTTCTTCCEEECCS
T ss_pred HHhccCCCccEEEecC
Confidence 3344444444444433
No 357
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.79 E-value=8.9e-19 Score=185.96 Aligned_cols=134 Identities=22% Similarity=0.208 Sum_probs=94.9
Q ss_pred CCCCEEEcccCCCcccCChhhcCCCCCCEEeCcCCCCCCCCCccccCCCCCCeEEccCcccccccCccccCCCCCcEEEc
Q 045553 110 TQLRVLLLAFNGFSGELPLEIGQLSLLEILDLSFNSFHGPIPPTLQNCSSLRLINLSGNQFNGTIPAFFGQSPGFQVVSL 189 (1082)
Q Consensus 110 ~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 189 (1082)
++|++|+|++|++++..|..|..+++|++|+|++|.|+...+..|.++++|++|+|++|+|++..+..|..+++|++|+|
T Consensus 40 ~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~L 119 (229)
T 3e6j_A 40 TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVLDLGTNQLTVLPSAVFDRLVHLKELFM 119 (229)
T ss_dssp TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhcccCCCcCEEECCCCcCCccChhHhCcchhhCeEec
Confidence 67888999999988877888888888888888888887555566788888888888888888666666777777777777
Q ss_pred ccCcccccCCcccccccccccEEEcccCccCCCCCccccCCCCccEEEccCCcCCCCcCccccCCCCCCEEeCCCCcCcc
Q 045553 190 SFNLLSGSVPEEFGDNCVSLEHILLAANSLTGSIPPSLGNCTELRSLLLSSNMLQGDIPSSFGQLVNLEVLDLSRNFLSG 269 (1082)
Q Consensus 190 ~~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 269 (1082)
++|+++ .+|.. +..+++|++|+|++|+|++..+..|..+++|+.|+|++|.+.+
T Consensus 120 s~N~l~-~lp~~-------------------------~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c 173 (229)
T 3e6j_A 120 CCNKLT-ELPRG-------------------------IERLTHLTHLALDQNQLKSIPHGAFDRLSSLTHAYLFGNPWDC 173 (229)
T ss_dssp CSSCCC-SCCTT-------------------------GGGCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCBCT
T ss_pred cCCccc-ccCcc-------------------------cccCCCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCCccC
Confidence 777766 44444 4445555555555555554444455555555666666665553
No 358
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.79 E-value=9.6e-19 Score=208.93 Aligned_cols=196 Identities=23% Similarity=0.296 Sum_probs=122.7
Q ss_pred CCCEEEcccCCCcccCChhhcCCCCCCEEeCcCCCCCCCCCccccCCCCCCeEEccCcccccccCccccCCCCCcEEEcc
Q 045553 111 QLRVLLLAFNGFSGELPLEIGQLSLLEILDLSFNSFHGPIPPTLQNCSSLRLINLSGNQFNGTIPAFFGQSPGFQVVSLS 190 (1082)
Q Consensus 111 ~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~ 190 (1082)
+|+.|+|++|++++ +|..+ +++|++|+|++|.|+ .+| ..+++|++|+|++|+|++ +|. +.. +|+.|+|+
T Consensus 60 ~L~~L~Ls~n~L~~-lp~~l--~~~L~~L~Ls~N~l~-~ip---~~l~~L~~L~Ls~N~l~~-ip~-l~~--~L~~L~Ls 128 (571)
T 3cvr_A 60 QFSELQLNRLNLSS-LPDNL--PPQITVLEITQNALI-SLP---ELPASLEYLDACDNRLST-LPE-LPA--SLKHLDVD 128 (571)
T ss_dssp TCSEEECCSSCCSC-CCSCC--CTTCSEEECCSSCCS-CCC---CCCTTCCEEECCSSCCSC-CCC-CCT--TCCEEECC
T ss_pred CccEEEeCCCCCCc-cCHhH--cCCCCEEECcCCCCc-ccc---cccCCCCEEEccCCCCCC-cch-hhc--CCCEEECC
Confidence 67777777777764 56544 266777777777776 555 345667777777777765 555 443 66666666
Q ss_pred cCcccccCCcccccccccccEEEcccCccCCCCCccccCCCCccEEEccCCcCCCCcCccccCCCCCCEEeCCCCcCccc
Q 045553 191 FNLLSGSVPEEFGDNCVSLEHILLAANSLTGSIPPSLGNCTELRSLLLSSNMLQGDIPSSFGQLVNLEVLDLSRNFLSGI 270 (1082)
Q Consensus 191 ~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 270 (1082)
+|+|++ +|. .+++|++|+|++|+|++ +|. .+++|++|+|++|+|++ +|. |. ++|++|+|++|+|+ .
T Consensus 129 ~N~l~~-lp~----~l~~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~L~~-lp~-l~--~~L~~L~Ls~N~L~-~ 194 (571)
T 3cvr_A 129 NNQLTM-LPE----LPALLEYINADNNQLTM-LPE---LPTSLEVLSVRNNQLTF-LPE-LP--ESLEALDVSTNLLE-S 194 (571)
T ss_dssp SSCCSC-CCC----CCTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC-CC--TTCCEEECCSSCCS-S
T ss_pred CCcCCC-CCC----cCccccEEeCCCCccCc-CCC---cCCCcCEEECCCCCCCC-cch-hh--CCCCEEECcCCCCC-c
Confidence 666663 554 25566666666666664 443 34566666666666664 444 44 56666666666665 3
Q ss_pred CCccccCCCCCcEEEeccccCCcccccCCCCCCcccccCCCcccccCCCCCccccCCCCCcEEEcCCCcccCCCCccccc
Q 045553 271 VPSELGMCKQLKVLVLRNDYGPLYSREHGDLPIQPVVDGGEDYNFFDGGLPDSITRLPNLRVFWAPNLNLEGIFPQNWEL 350 (1082)
Q Consensus 271 ~p~~l~~l~~L~~L~l~~n~~~~~~~~~~~l~~~~~~~~~~~~n~~~~~~p~~l~~l~~L~~L~l~~n~l~~~~~~~l~~ 350 (1082)
+|. +.. +| +...+.|+.|++++|+|.. +|..+..
T Consensus 195 lp~-~~~--~L------------------------------------------~~~~~~L~~L~Ls~N~l~~-lp~~l~~ 228 (571)
T 3cvr_A 195 LPA-VPV--RN------------------------------------------HHSEETEIFFRCRENRITH-IPENILS 228 (571)
T ss_dssp CCC-CC----------------------------------------------------CCEEEECCSSCCCC-CCGGGGG
T ss_pred hhh-HHH--hh------------------------------------------hcccccceEEecCCCccee-cCHHHhc
Confidence 333 321 11 0112335788888888876 4566666
Q ss_pred ccCCCeEEcCCccccCCCCccccCCCC
Q 045553 351 CSKLEMLNLAHNFFTGQIPASLGNCKS 377 (1082)
Q Consensus 351 l~~L~~L~Ls~N~i~~~~p~~~~~l~~ 377 (1082)
+++|+.|+|++|.+++.+|..+..++.
T Consensus 229 l~~L~~L~L~~N~l~~~~p~~l~~l~~ 255 (571)
T 3cvr_A 229 LDPTCTIILEDNPLSSRIRESLSQQTA 255 (571)
T ss_dssp SCTTEEEECCSSSCCHHHHHHHHHHHH
T ss_pred CCCCCEEEeeCCcCCCcCHHHHHHhhc
Confidence 889999999999998888888776543
No 359
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.77 E-value=7.1e-20 Score=227.10 Aligned_cols=198 Identities=21% Similarity=0.229 Sum_probs=77.7
Q ss_pred CHHHHHHHHhcccCCCCCCCCCCCCCCCCceeeeeEeeCCCCCeeeeecCCCccccccccCCCCCCCCCCCCcccCcCcc
Q 045553 1 KNALLQLKSAITEDPLGLTSNWNPKDTDSCSWHGVTCDPLSGRVTSLNLSSNLSRTSCSLLSLPPAAGPGGNFSFHFPCL 80 (1082)
Q Consensus 1 ~~~l~~~k~~~~~~~~~~~~~W~~~~~~~c~w~gv~C~~~~~~v~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (1082)
|+||.++..+...+.+..-++|....+.++.|.++.++. .+|+.++|.++...
T Consensus 134 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~--~~~~~l~L~~n~~~------------------------- 186 (727)
T 4b8c_D 134 KQALMEMADTLTDSKTAKKQQPTGDSTPSGTATNSAVST--PLTPKIELFANGKD------------------------- 186 (727)
T ss_dssp CHHHHHHHHHHHHHHTTC--------------------------------------------------------------
T ss_pred hhhhhhhhhhcccccCcccCCCcCCCCccccCCCceecC--CccceEEeeCCCCC-------------------------
Confidence 689999998887666666678866667788999999974 67899988764211
Q ss_pred cccccccCcccCCCCCCccccccccccCCCC-----CCEEEcccCCCcccCChhhcCCCCCCEEeCcCCCCCCCCCcccc
Q 045553 81 QLHQHDRGNINSNSSDKLSGNLSRAIGDLTQ-----LRVLLLAFNGFSGELPLEIGQLSLLEILDLSFNSFHGPIPPTLQ 155 (1082)
Q Consensus 81 ~~~~~~~~~~~~~~~~~l~g~l~~~l~~l~~-----L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~ 155 (1082)
. .+..+..... +..+++..|.+. ..|+.|..+++|+.|+|++|.+. .+|..+.
T Consensus 187 -------------------~-~~~~~l~~l~Ls~~~i~~~~~~~n~~~-~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~ 244 (727)
T 4b8c_D 187 -------------------E-ANQALLQHKKLSQYSIDEDDDIENRMV-MPKDSKYDDQLWHALDLSNLQIF-NISANIF 244 (727)
T ss_dssp --------------------------------------------------------CCCCCCEEECTTSCCS-CCCGGGG
T ss_pred -------------------c-chhhHhhcCccCcccccCcccccccee-cChhhhccCCCCcEEECCCCCCC-CCChhhc
Confidence 1 1111111111 222333334443 44556666666666666666666 5665566
Q ss_pred CCCCCCeEEccCcccccccCccccCCCCCcEEEcccCcccccCCcccccccccccEEEcccCccCCCCCccccCCCCccE
Q 045553 156 NCSSLRLINLSGNQFNGTIPAFFGQSPGFQVVSLSFNLLSGSVPEEFGDNCVSLEHILLAANSLTGSIPPSLGNCTELRS 235 (1082)
Q Consensus 156 ~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~ 235 (1082)
++++|++|+|++|+|+ .+|..|+.+++|++|+|++|+|+ .+|..++ .+++|++|+|++|.|+ .+|..|+++++|+.
T Consensus 245 ~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~-~lp~~~~-~l~~L~~L~L~~N~l~-~lp~~~~~l~~L~~ 320 (727)
T 4b8c_D 245 KYDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLT-SLPAELG-SCFQLKYFYFFDNMVT-TLPWEFGNLCNLQF 320 (727)
T ss_dssp GCCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCS-SCCSSGG-GGTTCSEEECCSSCCC-CCCSSTTSCTTCCC
T ss_pred CCCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCC-ccChhhc-CCCCCCEEECCCCCCC-ccChhhhcCCCccE
Confidence 6666666666666666 55666666666666666666555 4444443 3444444444444444 33444444444444
Q ss_pred EEccCCcCCCCcCccc
Q 045553 236 LLLSSNMLQGDIPSSF 251 (1082)
Q Consensus 236 L~L~~N~l~~~~p~~~ 251 (1082)
|+|++|.|++.+|..+
T Consensus 321 L~L~~N~l~~~~p~~~ 336 (727)
T 4b8c_D 321 LGVEGNPLEKQFLKIL 336 (727)
T ss_dssp EECTTSCCCSHHHHHH
T ss_pred EeCCCCccCCCChHHH
Confidence 4444444444444433
No 360
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.76 E-value=5.1e-18 Score=178.85 Aligned_cols=153 Identities=22% Similarity=0.283 Sum_probs=129.4
Q ss_pred CEEEcccCCCcccCChhhcCCCCCCEEeCcCCCCCCCCCccccCCCCCCeEEccCcccccccCccccCCCCCcEEEcccC
Q 045553 113 RVLLLAFNGFSGELPLEIGQLSLLEILDLSFNSFHGPIPPTLQNCSSLRLINLSGNQFNGTIPAFFGQSPGFQVVSLSFN 192 (1082)
Q Consensus 113 ~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N 192 (1082)
+.+++++++++ .+|..+. ++|++|+|++|.|++..+..|.++++|++|+|++|+|++..|..|.++++|++|+|++|
T Consensus 14 ~~v~c~~~~l~-~iP~~l~--~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N 90 (220)
T 2v9t_B 14 NIVDCRGKGLT-EIPTNLP--ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGN 90 (220)
T ss_dssp TEEECTTSCCS-SCCSSCC--TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSS
T ss_pred CEEEcCCCCcC-cCCCccC--cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCC
Confidence 57888888888 6776554 68999999999998766778899999999999999999888889999999999999999
Q ss_pred cccccCCcccccccccccEEEcccCccCCCCCccccCCCCccEEEccCCcCCCCcCccccCCCCCCEEeCCCCcCcc
Q 045553 193 LLSGSVPEEFGDNCVSLEHILLAANSLTGSIPPSLGNCTELRSLLLSSNMLQGDIPSSFGQLVNLEVLDLSRNFLSG 269 (1082)
Q Consensus 193 ~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 269 (1082)
+|+ .+|..++..+++|++|+|++|+|++..+..|..+++|++|+|++|+|++..+..|..+++|++|+|++|++..
T Consensus 91 ~l~-~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~c 166 (220)
T 2v9t_B 91 KIT-ELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFIC 166 (220)
T ss_dssp CCC-CCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCEEC
T ss_pred cCC-ccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHhCCCCCCEEEeCCCCcCC
Confidence 998 7777766678888888888888887778888888888888888888887777778888888888888888864
No 361
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.76 E-value=9.1e-19 Score=199.72 Aligned_cols=161 Identities=21% Similarity=0.205 Sum_probs=143.1
Q ss_pred ceeEEEccCCcccccCCccccc-cCCcccEEEccCCcccccCccccCCCCCCCEEEccCCCCCCCCcccccCCCCCCEEE
Q 045553 519 DGLIFDIGNNKLIGEVPSDMGS-HCKCMKFLSMAGNEFVGLIPQSFTNFDSLRNLNLSRNHLQGPLPSYINKMEDLKFLS 597 (1082)
Q Consensus 519 ~l~~l~l~~n~l~~~ip~~~~~-~~~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 597 (1082)
.++.|+|++|++. .++...+. .+++|++|+|++|+|+++.+..|.++++|++|+|++|+|++..+..|..+++|++|+
T Consensus 40 ~l~~L~Ls~N~l~-~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 118 (361)
T 2xot_A 40 YTALLDLSHNNLS-RLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSSNHLHTLDEFLFSDLQALEVLL 118 (361)
T ss_dssp TCSEEECCSSCCC-EECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEE
T ss_pred CCCEEECCCCCCC-ccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECCCCcCCcCCHHHhCCCcCCCEEE
Confidence 3578999999998 56666665 889999999999999999999999999999999999999988888899999999999
Q ss_pred cCCCcCCccCchhhhcCcccchhhccCcccCCCCCccc---cCCcccceecccCcccCCCCCCCCCCCCc--ccEEeccC
Q 045553 598 LSLNNFTGAIPWELTQLASLEVLELSANSLSGEIPSEF---SKLEHLNVLRLDHNNLTGRIPPGFGTRSS--LSIFDVSF 672 (1082)
Q Consensus 598 Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~---~~l~~L~~L~L~~N~l~~~~p~~~~~l~~--L~~l~ls~ 672 (1082)
|++|+|++..|..|.++++|+.|+|++|+|++..+..| ..+++|+.|+|++|+|++..+..|..++. |+.|+|++
T Consensus 119 L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~~~l~~l~l~~ 198 (361)
T 2xot_A 119 LYNNHIVVVDRNAFEDMAQLQKLYLSQNQISRFPVELIKDGNKLPKLMLLDLSSNKLKKLPLTDLQKLPAWVKNGLYLHN 198 (361)
T ss_dssp CCSSCCCEECTTTTTTCTTCCEEECCSSCCCSCCGGGTC----CTTCCEEECCSSCCCCCCHHHHHHSCHHHHTTEECCS
T ss_pred CCCCcccEECHHHhCCcccCCEEECCCCcCCeeCHHHhcCcccCCcCCEEECCCCCCCccCHHHhhhccHhhcceEEecC
Confidence 99999999889999999999999999999996555555 67999999999999999766677888887 48899999
Q ss_pred CccccCCC
Q 045553 673 NNLSGSAP 680 (1082)
Q Consensus 673 N~l~~~~p 680 (1082)
|+|.|.+.
T Consensus 199 N~~~C~C~ 206 (361)
T 2xot_A 199 NPLECDCK 206 (361)
T ss_dssp SCEECCHH
T ss_pred CCccCCcC
Confidence 99998765
No 362
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.75 E-value=6.2e-18 Score=178.16 Aligned_cols=136 Identities=19% Similarity=0.240 Sum_probs=128.3
Q ss_pred eeEEEccCCcccccCCccccccCCcccEEEccCCcccccCccccCCCCCCCEEEccCCCCCCCCcccccCCCCCCEEEcC
Q 045553 520 GLIFDIGNNKLIGEVPSDMGSHCKCMKFLSMAGNEFVGLIPQSFTNFDSLRNLNLSRNHLQGPLPSYINKMEDLKFLSLS 599 (1082)
Q Consensus 520 l~~l~l~~n~l~~~ip~~~~~~~~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls 599 (1082)
+++|++++|++.+..|...+..+++|++|+|++|+|+++.+..|.++++|++|+|++|+|++..+..|..+++|++|+|+
T Consensus 34 ~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls 113 (220)
T 2v70_A 34 TAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTSNRLENVQHKMFKGLESLKTLMLR 113 (220)
T ss_dssp CSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCCCCGGGGTTCSSCCEEECT
T ss_pred CCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCCCccCccCHhHhcCCcCCCEEECC
Confidence 36899999999977678888899999999999999999999999999999999999999999888899999999999999
Q ss_pred CCcCCccCchhhhcCcccchhhccCcccCCCCCccccCCcccceecccCcccCCCC
Q 045553 600 LNNFTGAIPWELTQLASLEVLELSANSLSGEIPSEFSKLEHLNVLRLDHNNLTGRI 655 (1082)
Q Consensus 600 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~ 655 (1082)
+|+|++..|..|..+++|++|+|++|+|++..|..|..+++|+.|+|++|+++...
T Consensus 114 ~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c 169 (220)
T 2v70_A 114 SNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPFNCNC 169 (220)
T ss_dssp TSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEEECCSCCEECSG
T ss_pred CCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCEEEecCcCCcCCC
Confidence 99999999999999999999999999999988999999999999999999998543
No 363
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.74 E-value=1.1e-17 Score=184.31 Aligned_cols=172 Identities=24% Similarity=0.282 Sum_probs=150.1
Q ss_pred ccCCCCCCEEEcccCCCcccCChhhcCCCCCCEEeCcCCCCCCCCCccccCCCCCCeEEccCcccccccCccccCCCCCc
Q 045553 106 IGDLTQLRVLLLAFNGFSGELPLEIGQLSLLEILDLSFNSFHGPIPPTLQNCSSLRLINLSGNQFNGTIPAFFGQSPGFQ 185 (1082)
Q Consensus 106 l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~ 185 (1082)
+.++++|++|++++|.++ .++ .+..+++|++|+|++|.+++. +. +.++++|++|+|++|++++ ++ .+..+++|+
T Consensus 42 ~~~l~~L~~L~l~~~~i~-~~~-~~~~l~~L~~L~L~~n~l~~~-~~-l~~l~~L~~L~l~~n~l~~-~~-~l~~l~~L~ 115 (291)
T 1h6t_A 42 QNELNSIDQIIANNSDIK-SVQ-GIQYLPNVTKLFLNGNKLTDI-KP-LANLKNLGWLFLDENKVKD-LS-SLKDLKKLK 115 (291)
T ss_dssp HHHHHTCCEEECTTSCCC-CCT-TGGGCTTCCEEECCSSCCCCC-GG-GTTCTTCCEEECCSSCCCC-GG-GGTTCTTCC
T ss_pred hhhcCcccEEEccCCCcc-cCh-hHhcCCCCCEEEccCCccCCC-cc-cccCCCCCEEECCCCcCCC-Ch-hhccCCCCC
Confidence 567899999999999998 444 489999999999999999954 44 9999999999999999985 33 489999999
Q ss_pred EEEcccCcccccCCcccccccccccEEEcccCccCCCCCccccCCCCccEEEccCCcCCCCcCccccCCCCCCEEeCCCC
Q 045553 186 VVSLSFNLLSGSVPEEFGDNCVSLEHILLAANSLTGSIPPSLGNCTELRSLLLSSNMLQGDIPSSFGQLVNLEVLDLSRN 265 (1082)
Q Consensus 186 ~L~L~~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N 265 (1082)
+|+|++|++++ ++ .+ ..+++|++|++++|++++. ..+..+++|++|++++|++++..+ +..+++|++|++++|
T Consensus 116 ~L~L~~n~i~~-~~-~l-~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~L~L~~N 188 (291)
T 1h6t_A 116 SLSLEHNGISD-IN-GL-VHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKN 188 (291)
T ss_dssp EEECTTSCCCC-CG-GG-GGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCCEEECCSS
T ss_pred EEECCCCcCCC-Ch-hh-cCCCCCCEEEccCCcCCcc--hhhccCCCCCEEEccCCccccchh--hcCCCccCEEECCCC
Confidence 99999999984 43 34 3689999999999999965 679999999999999999996555 999999999999999
Q ss_pred cCcccCCccccCCCCCcEEEeccccCC
Q 045553 266 FLSGIVPSELGMCKQLKVLVLRNDYGP 292 (1082)
Q Consensus 266 ~l~~~~p~~l~~l~~L~~L~l~~n~~~ 292 (1082)
.+++ ++ .+..+++|+.|++++|.+.
T Consensus 189 ~i~~-l~-~l~~l~~L~~L~l~~n~i~ 213 (291)
T 1h6t_A 189 HISD-LR-ALAGLKNLDVLELFSQECL 213 (291)
T ss_dssp CCCB-CG-GGTTCTTCSEEEEEEEEEE
T ss_pred cCCC-Ch-hhccCCCCCEEECcCCccc
Confidence 9985 44 4899999999999997543
No 364
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.74 E-value=1.6e-17 Score=200.85 Aligned_cols=170 Identities=24% Similarity=0.297 Sum_probs=127.5
Q ss_pred ccCCCCCCEEEcccCCCcccCChhhcCCCCCCEEeCcCCCCCCCCCccccCCCCCCeEEccCcccccccCccccCCCCCc
Q 045553 106 IGDLTQLRVLLLAFNGFSGELPLEIGQLSLLEILDLSFNSFHGPIPPTLQNCSSLRLINLSGNQFNGTIPAFFGQSPGFQ 185 (1082)
Q Consensus 106 l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~ 185 (1082)
+.+|++|+.|+|++|.+. .+| .+..+++|+.|+|++|.|++..| +.++++|++|+|++|++++ +| .+..+++|+
T Consensus 39 ~~~L~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~-l~-~l~~l~~L~ 112 (605)
T 1m9s_A 39 QNELNSIDQIIANNSDIK-SVQ-GIQYLPNVTKLFLNGNKLTDIKP--LTNLKNLGWLFLDENKIKD-LS-SLKDLKKLK 112 (605)
T ss_dssp HHHHTTCCCCBCTTCCCC-CCT-TGGGCTTCCEEECTTSCCCCCGG--GGGCTTCCEEECCSSCCCC-CT-TSTTCTTCC
T ss_pred hhcCCCCCEEECcCCCCC-CCh-HHccCCCCCEEEeeCCCCCCChh--hccCCCCCEEECcCCCCCC-Ch-hhccCCCCC
Confidence 567788888888888887 444 58888888888888888885443 8888888888888888874 33 677888888
Q ss_pred EEEcccCcccccCCcccccccccccEEEcccCccCCCCCccccCCCCccEEEccCCcCCCCcCccccCCCCCCEEeCCCC
Q 045553 186 VVSLSFNLLSGSVPEEFGDNCVSLEHILLAANSLTGSIPPSLGNCTELRSLLLSSNMLQGDIPSSFGQLVNLEVLDLSRN 265 (1082)
Q Consensus 186 ~L~L~~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N 265 (1082)
.|+|++|++.+ ++ .+ ..+++|+.|+|++|++++. ..+..+++|+.|+|++|.|++..| +..+++|+.|+|++|
T Consensus 113 ~L~Ls~N~l~~-l~-~l-~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N 185 (605)
T 1m9s_A 113 SLSLEHNGISD-IN-GL-VHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKN 185 (605)
T ss_dssp EEECTTSCCCC-CG-GG-GGCTTCSEEECCSSCCCCC--GGGGSCTTCSEEECCSSCCCCCGG--GTTCTTCCEEECCSS
T ss_pred EEEecCCCCCC-Cc-cc-cCCCccCEEECCCCccCCc--hhhcccCCCCEEECcCCcCCCchh--hccCCCCCEEECcCC
Confidence 88888888873 43 23 3577888888888888754 567777888888888888876555 777788888888888
Q ss_pred cCcccCCccccCCCCCcEEEecccc
Q 045553 266 FLSGIVPSELGMCKQLKVLVLRNDY 290 (1082)
Q Consensus 266 ~l~~~~p~~l~~l~~L~~L~l~~n~ 290 (1082)
+|++. ..+..+++|+.|+|++|.
T Consensus 186 ~i~~l--~~l~~l~~L~~L~L~~N~ 208 (605)
T 1m9s_A 186 HISDL--RALAGLKNLDVLELFSQE 208 (605)
T ss_dssp CCCBC--GGGTTCTTCSEEECCSEE
T ss_pred CCCCC--hHHccCCCCCEEEccCCc
Confidence 87753 356777777777776654
No 365
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.74 E-value=1.1e-17 Score=184.47 Aligned_cols=162 Identities=19% Similarity=0.263 Sum_probs=111.1
Q ss_pred CCEEEcccCCCcccCChhhcCCCCCCEEeCcCCCCCCCCCccccCCCCCCeEEccCcccccccCccccCCCCCcEEEccc
Q 045553 112 LRVLLLAFNGFSGELPLEIGQLSLLEILDLSFNSFHGPIPPTLQNCSSLRLINLSGNQFNGTIPAFFGQSPGFQVVSLSF 191 (1082)
Q Consensus 112 L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~ 191 (1082)
+..+.+..+.+++..+ +..+++|++|++++|.++ .++ .+..+++|++|+|++|++++..+ +..+++|++|+|++
T Consensus 26 ~~~~~l~~~~~~~~~~--~~~l~~L~~L~l~~~~i~-~~~-~~~~l~~L~~L~L~~n~l~~~~~--l~~l~~L~~L~l~~ 99 (291)
T 1h6t_A 26 TIKDNLKKKSVTDAVT--QNELNSIDQIIANNSDIK-SVQ-GIQYLPNVTKLFLNGNKLTDIKP--LANLKNLGWLFLDE 99 (291)
T ss_dssp HHHHHTTCSCTTSEEC--HHHHHTCCEEECTTSCCC-CCT-TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCS
T ss_pred HHHHHhcCCCcccccc--hhhcCcccEEEccCCCcc-cCh-hHhcCCCCCEEEccCCccCCCcc--cccCCCCCEEECCC
Confidence 3444566666664333 457889999999999998 444 48889999999999999986544 88888899999888
Q ss_pred CcccccCCcccccccccccEEEcccCccCCCCCccccCCCCccEEEccCCcCCCCcCccccCCCCCCEEeCCCCcCcccC
Q 045553 192 NLLSGSVPEEFGDNCVSLEHILLAANSLTGSIPPSLGNCTELRSLLLSSNMLQGDIPSSFGQLVNLEVLDLSRNFLSGIV 271 (1082)
Q Consensus 192 N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~ 271 (1082)
|+++ .+|. + ..+++|++|++++|++++. ..+..+++|+.|++++|++++. ..+..+++|++|++++|++++..
T Consensus 100 n~l~-~~~~-l-~~l~~L~~L~L~~n~i~~~--~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~N~l~~~~ 172 (291)
T 1h6t_A 100 NKVK-DLSS-L-KDLKKLKSLSLEHNGISDI--NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIV 172 (291)
T ss_dssp SCCC-CGGG-G-TTCTTCCEEECTTSCCCCC--GGGGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCG
T ss_pred CcCC-CChh-h-ccCCCCCEEECCCCcCCCC--hhhcCCCCCCEEEccCCcCCcc--hhhccCCCCCEEEccCCccccch
Confidence 8887 3443 3 3567777777777777743 3566677777777777777643 45666677777777777666433
Q ss_pred CccccCCCCCcEEEecc
Q 045553 272 PSELGMCKQLKVLVLRN 288 (1082)
Q Consensus 272 p~~l~~l~~L~~L~l~~ 288 (1082)
| +..+++|+.|++++
T Consensus 173 ~--l~~l~~L~~L~L~~ 187 (291)
T 1h6t_A 173 P--LAGLTKLQNLYLSK 187 (291)
T ss_dssp G--GTTCTTCCEEECCS
T ss_pred h--hcCCCccCEEECCC
Confidence 2 55555555555544
No 366
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.72 E-value=1.6e-17 Score=200.73 Aligned_cols=164 Identities=20% Similarity=0.278 Sum_probs=116.0
Q ss_pred CCCEEEcccCCCcccCChhhcCCCCCCEEeCcCCCCCCCCCccccCCCCCCeEEccCcccccccCccccCCCCCcEEEcc
Q 045553 111 QLRVLLLAFNGFSGELPLEIGQLSLLEILDLSFNSFHGPIPPTLQNCSSLRLINLSGNQFNGTIPAFFGQSPGFQVVSLS 190 (1082)
Q Consensus 111 ~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~ 190 (1082)
.+..+.+..+.+...++ +..|++|+.|+|++|.+. .+| .+..+++|++|+|++|++++..| +..+++|+.|+|+
T Consensus 22 ~l~~l~l~~~~i~~~~~--~~~L~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls 95 (605)
T 1m9s_A 22 ETIKDNLKKKSVTDAVT--QNELNSIDQIIANNSDIK-SVQ-GIQYLPNVTKLFLNGNKLTDIKP--LTNLKNLGWLFLD 95 (605)
T ss_dssp HHHHHHTTCSCTTSEEC--HHHHTTCCCCBCTTCCCC-CCT-TGGGCTTCCEEECTTSCCCCCGG--GGGCTTCCEEECC
T ss_pred HHHHHhccCCCcccccc--hhcCCCCCEEECcCCCCC-CCh-HHccCCCCCEEEeeCCCCCCChh--hccCCCCCEEECc
Confidence 34555667777764443 567888999999999988 455 58889999999999999886554 7888888888888
Q ss_pred cCcccccCCcccccccccccEEEcccCccCCCCCccccCCCCccEEEccCCcCCCCcCccccCCCCCCEEeCCCCcCccc
Q 045553 191 FNLLSGSVPEEFGDNCVSLEHILLAANSLTGSIPPSLGNCTELRSLLLSSNMLQGDIPSSFGQLVNLEVLDLSRNFLSGI 270 (1082)
Q Consensus 191 ~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 270 (1082)
+|++. .+| .+ ..+++|++|+|++|++++ + +.+..+++|+.|+|++|.+++. ..|+.+++|+.|+|++|++++.
T Consensus 96 ~N~l~-~l~-~l-~~l~~L~~L~Ls~N~l~~-l-~~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~~ 168 (605)
T 1m9s_A 96 ENKIK-DLS-SL-KDLKKLKSLSLEHNGISD-I-NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDI 168 (605)
T ss_dssp SSCCC-CCT-TS-TTCTTCCEEECTTSCCCC-C-GGGGGCTTCSEEECCSSCCCCC--GGGGSCTTCSEEECCSSCCCCC
T ss_pred CCCCC-CCh-hh-ccCCCCCEEEecCCCCCC-C-ccccCCCccCEEECCCCccCCc--hhhcccCCCCEEECcCCcCCCc
Confidence 88887 344 33 356777777777777774 2 3466777777777777777643 4566777777777777777654
Q ss_pred CCccccCCCCCcEEEeccc
Q 045553 271 VPSELGMCKQLKVLVLRND 289 (1082)
Q Consensus 271 ~p~~l~~l~~L~~L~l~~n 289 (1082)
.| +..+++|+.|+|++|
T Consensus 169 ~~--l~~l~~L~~L~Ls~N 185 (605)
T 1m9s_A 169 VP--LAGLTKLQNLYLSKN 185 (605)
T ss_dssp GG--GTTCTTCCEEECCSS
T ss_pred hh--hccCCCCCEEECcCC
Confidence 44 555666666655553
No 367
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.72 E-value=4.2e-20 Score=222.03 Aligned_cols=202 Identities=21% Similarity=0.197 Sum_probs=109.5
Q ss_pred CCCCCEEeCcCCCCCCCCCccccCCCCCCeEEccCcc-------------cccccCccccCCCCCcEEE-cccCcccccC
Q 045553 133 LSLLEILDLSFNSFHGPIPPTLQNCSSLRLINLSGNQ-------------FNGTIPAFFGQSPGFQVVS-LSFNLLSGSV 198 (1082)
Q Consensus 133 l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~-------------l~~~~p~~~~~l~~L~~L~-L~~N~l~~~~ 198 (1082)
+++|+.|+|++|.++ .+|..++++++|+.|++++|. +.+..|..++.+++|+.|+ ++.|.+.
T Consensus 348 ~~~L~~L~Ls~n~L~-~Lp~~i~~l~~L~~L~l~~n~~l~~l~~ll~~~~~~~~~~~~l~~l~~L~~L~~l~~n~~~--- 423 (567)
T 1dce_A 348 DEQLFRCELSVEKST-VLQSELESCKELQELEPENKWCLLTIILLMRALDPLLYEKETLQYFSTLKAVDPMRAAYLD--- 423 (567)
T ss_dssp TTTSSSCCCCHHHHH-HHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHCTGGGHHHHHHHHHHHHHHCGGGHHHHH---
T ss_pred CccceeccCChhhHH-hhHHHHHHHHHHHHhccccchhhhhHHHHHHhcccccCCHHHHHHHHhcccCcchhhcccc---
Confidence 334444444444443 344444444444444443332 3344555555555565555 4444332
Q ss_pred CcccccccccccEEEcccCccCCCCCccccCCCCccEEEccCCcCCCCcCccccCCCCCCEEeCCCCcCcccCCccccCC
Q 045553 199 PEEFGDNCVSLEHILLAANSLTGSIPPSLGNCTELRSLLLSSNMLQGDIPSSFGQLVNLEVLDLSRNFLSGIVPSELGMC 278 (1082)
Q Consensus 199 p~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l 278 (1082)
.|..+.+.+|.++.. +. ..|+.|+|++|+|++ +|. |+.+++|+.|+|++|+|+ .+|..++.+
T Consensus 424 ---------~L~~l~l~~n~i~~l-~~-----~~L~~L~Ls~n~l~~-lp~-~~~l~~L~~L~Ls~N~l~-~lp~~~~~l 485 (567)
T 1dce_A 424 ---------DLRSKFLLENSVLKM-EY-----ADVRVLHLAHKDLTV-LCH-LEQLLLVTHLDLSHNRLR-ALPPALAAL 485 (567)
T ss_dssp ---------HHHHHHHHHHHHHHH-HH-----TTCSEEECTTSCCSS-CCC-GGGGTTCCEEECCSSCCC-CCCGGGGGC
T ss_pred ---------hhhhhhhhccccccc-Cc-----cCceEEEecCCCCCC-CcC-ccccccCcEeecCccccc-ccchhhhcC
Confidence 333344444444421 11 135555555555553 444 555555555555555555 445555555
Q ss_pred CCCcEEEeccccCCcccccCCCCCCcccccCCCcccccCCCCCccccCCCCCcEEEcCCCcccCCC-CcccccccCCCeE
Q 045553 279 KQLKVLVLRNDYGPLYSREHGDLPIQPVVDGGEDYNFFDGGLPDSITRLPNLRVFWAPNLNLEGIF-PQNWELCSKLEML 357 (1082)
Q Consensus 279 ~~L~~L~l~~n~~~~~~~~~~~l~~~~~~~~~~~~n~~~~~~p~~l~~l~~L~~L~l~~n~l~~~~-~~~l~~l~~L~~L 357 (1082)
++|+.|+|++| .+++ +| .|+.+++|++|++++|++.+.. |..+..+++|+.|
T Consensus 486 ~~L~~L~Ls~N-------------------------~l~~-lp-~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L 538 (567)
T 1dce_A 486 RCLEVLQASDN-------------------------ALEN-VD-GVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLL 538 (567)
T ss_dssp TTCCEEECCSS-------------------------CCCC-CG-GGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEE
T ss_pred CCCCEEECCCC-------------------------CCCC-Cc-ccCCCCCCcEEECCCCCCCCCCCcHHHhcCCCCCEE
Confidence 55555555553 2222 34 5666667777777777777776 7777778888888
Q ss_pred EcCCccccCCCCcc---ccCCCCCCEEec
Q 045553 358 NLAHNFFTGQIPAS---LGNCKSLYFLDL 383 (1082)
Q Consensus 358 ~Ls~N~i~~~~p~~---~~~l~~L~~L~L 383 (1082)
+|++|++++..|.. +..+++|+.|++
T Consensus 539 ~L~~N~l~~~~~~~~~l~~~lp~L~~L~l 567 (567)
T 1dce_A 539 NLQGNSLCQEEGIQERLAEMLPSVSSILT 567 (567)
T ss_dssp ECTTSGGGGSSSCTTHHHHHCTTCSEEEC
T ss_pred EecCCcCCCCccHHHHHHHHCcccCccCC
Confidence 88888887544322 233778888764
No 368
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.72 E-value=6.1e-20 Score=220.65 Aligned_cols=119 Identities=23% Similarity=0.258 Sum_probs=60.9
Q ss_pred CCEEeCCCCcCcccCCccccCCCCCcEEEeccccCCcccccCCCCCCcccccCCCcccccCCCCCccccCCCCCcEEEcC
Q 045553 257 LEVLDLSRNFLSGIVPSELGMCKQLKVLVLRNDYGPLYSREHGDLPIQPVVDGGEDYNFFDGGLPDSITRLPNLRVFWAP 336 (1082)
Q Consensus 257 L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~n~~~~~~~~~~~l~~~~~~~~~~~~n~~~~~~p~~l~~l~~L~~L~l~ 336 (1082)
|+.|+|++|+|++ +|. ++.+++|+.|++++| .+. .+|..|+.+++|+.|+++
T Consensus 443 L~~L~Ls~n~l~~-lp~-~~~l~~L~~L~Ls~N-------------------------~l~-~lp~~~~~l~~L~~L~Ls 494 (567)
T 1dce_A 443 VRVLHLAHKDLTV-LCH-LEQLLLVTHLDLSHN-------------------------RLR-ALPPALAALRCLEVLQAS 494 (567)
T ss_dssp CSEEECTTSCCSS-CCC-GGGGTTCCEEECCSS-------------------------CCC-CCCGGGGGCTTCCEEECC
T ss_pred ceEEEecCCCCCC-CcC-ccccccCcEeecCcc-------------------------ccc-ccchhhhcCCCCCEEECC
Confidence 5555555555553 343 555555555555543 222 344555555555555555
Q ss_pred CCcccCCCCcccccccCCCeEEcCCccccCCC-CccccCCCCCCEEecCCCcCcccCCCCcc----cCcccEEE
Q 045553 337 NLNLEGIFPQNWELCSKLEMLNLAHNFFTGQI-PASLGNCKSLYFLDLSSNNLTGLLPEEVS----VPCMAVFN 405 (1082)
Q Consensus 337 ~n~l~~~~~~~l~~l~~L~~L~Ls~N~i~~~~-p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~----l~~L~~L~ 405 (1082)
+|.++++ | .+..+++|+.|+|++|+|++.. |..++.+++|+.|+|++|+|++.+|.... +++|+.|+
T Consensus 495 ~N~l~~l-p-~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~l~~~lp~L~~L~ 566 (567)
T 1dce_A 495 DNALENV-D-GVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEGIQERLAEMLPSVSSIL 566 (567)
T ss_dssp SSCCCCC-G-GGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEEECTTSGGGGSSSCTTHHHHHCTTCSEEE
T ss_pred CCCCCCC-c-ccCCCCCCcEEECCCCCCCCCCCcHHHhcCCCCCEEEecCCcCCCCccHHHHHHHHCcccCccC
Confidence 5555552 3 4555555555555555555443 55555555555555555555555443321 44555543
No 369
>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*
Probab=99.71 E-value=1.6e-17 Score=179.65 Aligned_cols=137 Identities=20% Similarity=0.246 Sum_probs=108.0
Q ss_pred CccccceecccCceEEEEEEE-cCCeE--EEEEEeecCccc------------------------cHHHHHHHHHHHhcc
Q 045553 802 GFNVQNCIGSGGFGATYKAEI-IPGVV--VAVKRLSVGRFQ------------------------GVQQFAAEIRTLGRV 854 (1082)
Q Consensus 802 ~~~~~~~lg~G~~g~Vy~a~~-~~~~~--vavK~~~~~~~~------------------------~~~~~~~e~~~l~~l 854 (1082)
-|++.+.||+|+||.||+|.. .+|+. ||||+++..... ....+.+|++.++++
T Consensus 48 ~~~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l 127 (258)
T 1zth_A 48 ITAMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERA 127 (258)
T ss_dssp EEEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHH
T ss_pred chhhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHH
Confidence 367889999999999999977 67989 999987543111 113678999999999
Q ss_pred CCCce--eeEeeeeccCCeEEEEEeecCC-C----CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHh-hCCCCCeEec
Q 045553 855 QHPNL--VTLIGYHVSEAEMFLIYNYLPG-G----NLEKFIQDRPRRTVEWSMLHKIALDVARALAYLH-DECVPRVLHR 926 (1082)
Q Consensus 855 ~h~ni--v~l~~~~~~~~~~~lV~E~~~~-g----sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH-~~~~~~ivH~ 926 (1082)
+|+++ +.++++ ...++||||+.+ | +|.++... .++..+..++.|++.|+.||| +. +|+||
T Consensus 128 ~~~~i~~p~~~~~----~~~~lVmE~~g~~g~~~~~L~~~~~~-----~~~~~~~~i~~qi~~~l~~lH~~~---givHr 195 (258)
T 1zth_A 128 KEAGVSVPQPYTY----MKNVLLMEFIGEDELPAPTLVELGRE-----LKELDVEGIFNDVVENVKRLYQEA---ELVHA 195 (258)
T ss_dssp HHTTCCCCCEEEE----ETTEEEEECCEETTEECCBHHHHGGG-----GGGSCHHHHHHHHHHHHHHHHHTS---CEECS
T ss_pred HhCCCCCCeEEEc----CCCEEEEEecCCCCCccccHHHHhhc-----cChHHHHHHHHHHHHHHHHHHHHC---CEEeC
Confidence 88764 334432 357899999942 3 77766543 234567789999999999999 88 99999
Q ss_pred cCCCCCEEEcCCCcEEEeecccceec
Q 045553 927 DIKPSNILLDNNLNAYLSDFGLARLL 952 (1082)
Q Consensus 927 Dlk~~Nill~~~~~~kl~DfGla~~~ 952 (1082)
||||+|||++. .++|+|||+|...
T Consensus 196 Dlkp~NILl~~--~~~liDFG~a~~~ 219 (258)
T 1zth_A 196 DLSEYNIMYID--KVYFIDMGQAVTL 219 (258)
T ss_dssp SCSTTSEEESS--SEEECCCTTCEET
T ss_pred CCCHHHEEEcC--cEEEEECcccccC
Confidence 99999999998 9999999999764
No 370
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.70 E-value=3.3e-17 Score=169.54 Aligned_cols=154 Identities=15% Similarity=0.149 Sum_probs=110.8
Q ss_pred ccCCCCCCEEEcccCCCcccCChhhcCCCCCCEEeCcCCCCCCCCCccccCCCCCCeEEccCcccccccCccccCCCCCc
Q 045553 106 IGDLTQLRVLLLAFNGFSGELPLEIGQLSLLEILDLSFNSFHGPIPPTLQNCSSLRLINLSGNQFNGTIPAFFGQSPGFQ 185 (1082)
Q Consensus 106 l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~ 185 (1082)
..++++|++|++++|.++ .+| .+..+++|++|++++|.++ .+..+.++++|++|++++|++++..+..|+.+++|+
T Consensus 40 ~~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~l~~n~~~--~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~ 115 (197)
T 4ezg_A 40 EAQMNSLTYITLANINVT-DLT-GIEYAHNIKDLTINNIHAT--NYNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLT 115 (197)
T ss_dssp HHHHHTCCEEEEESSCCS-CCT-TGGGCTTCSEEEEESCCCS--CCGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCC
T ss_pred hhhcCCccEEeccCCCcc-ChH-HHhcCCCCCEEEccCCCCC--cchhhhcCCCCCEEEeECCccCcccChhhcCCCCCC
Confidence 366778888888888888 666 6888888888888888665 334688888888888888888877777888888888
Q ss_pred EEEcccCcccccCCcccccccccccEEEcccCc-cCCCCCccccCCCCccEEEccCCcCCCCcCccccCCCCCCEEeCCC
Q 045553 186 VVSLSFNLLSGSVPEEFGDNCVSLEHILLAANS-LTGSIPPSLGNCTELRSLLLSSNMLQGDIPSSFGQLVNLEVLDLSR 264 (1082)
Q Consensus 186 ~L~L~~N~l~~~~p~~~~~~l~~L~~L~L~~N~-l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~ 264 (1082)
+|+|++|++++..|..+. .+++|++|++++|+ ++ .++ .+..+++|++|++++|++++ ++ .+..+++|++|++++
T Consensus 116 ~L~Ls~n~i~~~~~~~l~-~l~~L~~L~L~~n~~i~-~~~-~l~~l~~L~~L~l~~n~i~~-~~-~l~~l~~L~~L~l~~ 190 (197)
T 4ezg_A 116 LLDISHSAHDDSILTKIN-TLPKVNSIDLSYNGAIT-DIM-PLKTLPELKSLNIQFDGVHD-YR-GIEDFPKLNQLYAFS 190 (197)
T ss_dssp EEECCSSBCBGGGHHHHT-TCSSCCEEECCSCTBCC-CCG-GGGGCSSCCEEECTTBCCCC-CT-TGGGCSSCCEEEECB
T ss_pred EEEecCCccCcHhHHHHh-hCCCCCEEEccCCCCcc-ccH-hhcCCCCCCEEECCCCCCcC-hH-HhccCCCCCEEEeeC
Confidence 888888888765555554 46777777777776 44 444 56667777777777777764 33 566667777777777
Q ss_pred CcCc
Q 045553 265 NFLS 268 (1082)
Q Consensus 265 N~l~ 268 (1082)
|++.
T Consensus 191 N~i~ 194 (197)
T 4ezg_A 191 QTIG 194 (197)
T ss_dssp C---
T ss_pred cccC
Confidence 7664
No 371
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.70 E-value=9e-18 Score=182.14 Aligned_cols=168 Identities=22% Similarity=0.232 Sum_probs=122.2
Q ss_pred CCCCCCEEEcccCCCcccCChhhcCCCCCCEEeCcCCCCCCCCCccccCCCCCCeEEccCcccccccCccccCCCCCcEE
Q 045553 108 DLTQLRVLLLAFNGFSGELPLEIGQLSLLEILDLSFNSFHGPIPPTLQNCSSLRLINLSGNQFNGTIPAFFGQSPGFQVV 187 (1082)
Q Consensus 108 ~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 187 (1082)
++.++..+++++|.+++ ++ .+..+++|++|++++|.++ .+| .+..+++|++|+|++|++++..+ +..+++|+.|
T Consensus 17 ~l~~l~~l~l~~~~i~~-~~-~~~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~L~~N~i~~~~~--l~~l~~L~~L 90 (263)
T 1xeu_A 17 GLANAVKQNLGKQSVTD-LV-SQKELSGVQNFNGDNSNIQ-SLA-GMQFFTNLKELHLSHNQISDLSP--LKDLTKLEEL 90 (263)
T ss_dssp HHHHHHHHHHTCSCTTS-EE-CHHHHTTCSEEECTTSCCC-CCT-TGGGCTTCCEEECCSSCCCCCGG--GTTCSSCCEE
T ss_pred HHHHHHHHHhcCCCccc-cc-chhhcCcCcEEECcCCCcc-cch-HHhhCCCCCEEECCCCccCCChh--hccCCCCCEE
Confidence 45556677777777773 33 5777788888888888887 455 57778888888888888875444 7788888888
Q ss_pred EcccCcccccCCcccccccccccEEEcccCccCCCCCccccCCCCccEEEccCCcCCCCcCccccCCCCCCEEeCCCCcC
Q 045553 188 SLSFNLLSGSVPEEFGDNCVSLEHILLAANSLTGSIPPSLGNCTELRSLLLSSNMLQGDIPSSFGQLVNLEVLDLSRNFL 267 (1082)
Q Consensus 188 ~L~~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l 267 (1082)
+|++|+++ .+|.... ++|++|+|++|++++. + .+..+++|+.|+|++|++++. + .+..+++|++|++++|++
T Consensus 91 ~L~~N~l~-~l~~~~~---~~L~~L~L~~N~l~~~-~-~l~~l~~L~~L~Ls~N~i~~~-~-~l~~l~~L~~L~L~~N~i 162 (263)
T 1xeu_A 91 SVNRNRLK-NLNGIPS---ACLSRLFLDNNELRDT-D-SLIHLKNLEILSIRNNKLKSI-V-MLGFLSKLEVLDLHGNEI 162 (263)
T ss_dssp ECCSSCCS-CCTTCCC---SSCCEEECCSSCCSBS-G-GGTTCTTCCEEECTTSCCCBC-G-GGGGCTTCCEEECTTSCC
T ss_pred ECCCCccC-CcCcccc---CcccEEEccCCccCCC-h-hhcCcccccEEECCCCcCCCC-h-HHccCCCCCEEECCCCcC
Confidence 88888887 4554322 6788888888888753 3 577788888888888888753 3 577788888888888888
Q ss_pred cccCCccccCCCCCcEEEeccccC
Q 045553 268 SGIVPSELGMCKQLKVLVLRNDYG 291 (1082)
Q Consensus 268 ~~~~p~~l~~l~~L~~L~l~~n~~ 291 (1082)
++. ..+..+++|+.|++++|.+
T Consensus 163 ~~~--~~l~~l~~L~~L~l~~N~~ 184 (263)
T 1xeu_A 163 TNT--GGLTRLKKVNWIDLTGQKC 184 (263)
T ss_dssp CBC--TTSTTCCCCCEEEEEEEEE
T ss_pred cch--HHhccCCCCCEEeCCCCcc
Confidence 755 5677777777777777543
No 372
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.70 E-value=1.7e-17 Score=170.75 Aligned_cols=129 Identities=26% Similarity=0.324 Sum_probs=79.2
Q ss_pred eEEEccCCcccccCCccccccCCcccEEEccCCcccccCcc-ccCCCCCCCEEEccCCCCCCCCcccccCCCCCCEEEcC
Q 045553 521 LIFDIGNNKLIGEVPSDMGSHCKCMKFLSMAGNEFVGLIPQ-SFTNFDSLRNLNLSRNHLQGPLPSYINKMEDLKFLSLS 599 (1082)
Q Consensus 521 ~~l~l~~n~l~~~ip~~~~~~~~~L~~L~L~~N~i~~~~~~-~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls 599 (1082)
+++++++|++. .+|..++. +|++|++++|+|+++.+. .|..+++|++|+|++|+|++..|..|..+++|++|+|+
T Consensus 11 ~~l~~s~~~l~-~ip~~~~~---~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls 86 (192)
T 1w8a_A 11 TTVDCTGRGLK-EIPRDIPL---HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLG 86 (192)
T ss_dssp TEEECTTSCCS-SCCSCCCT---TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECC
T ss_pred CEEEcCCCCcC-cCccCCCC---CCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECC
Confidence 46777777775 67766653 466777777777666553 36666666666666666666656666666666666666
Q ss_pred CCcCCccCchhhhcCcccchhhccCcccCCCCCccccCCcccceecccCcccCC
Q 045553 600 LNNFTGAIPWELTQLASLEVLELSANSLSGEIPSEFSKLEHLNVLRLDHNNLTG 653 (1082)
Q Consensus 600 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~ 653 (1082)
+|+|++..|..|.++++|++|+|++|+|++..|..|..+++|++|+|++|++++
T Consensus 87 ~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c 140 (192)
T 1w8a_A 87 ENKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNC 140 (192)
T ss_dssp SCCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCC
T ss_pred CCcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccC
Confidence 666665555555555555555555555555555555555555555555555543
No 373
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.69 E-value=5.1e-17 Score=167.23 Aligned_cols=135 Identities=20% Similarity=0.273 Sum_probs=122.3
Q ss_pred ccEEEccCCcccccCccccCCCCCCCEEEccCCCCCCCCcc-cccCCCCCCEEEcCCCcCCccCchhhhcCcccchhhcc
Q 045553 545 MKFLSMAGNEFVGLIPQSFTNFDSLRNLNLSRNHLQGPLPS-YINKMEDLKFLSLSLNNFTGAIPWELTQLASLEVLELS 623 (1082)
Q Consensus 545 L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~-~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls 623 (1082)
-+.+++++|+++.+ |..+.. +|++|+|++|+|++..+. .|..+++|++|+|++|+|++..|..|.++++|++|+|+
T Consensus 10 ~~~l~~s~~~l~~i-p~~~~~--~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls 86 (192)
T 1w8a_A 10 GTTVDCTGRGLKEI-PRDIPL--HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLG 86 (192)
T ss_dssp TTEEECTTSCCSSC-CSCCCT--TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECC
T ss_pred CCEEEcCCCCcCcC-ccCCCC--CCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECC
Confidence 37899999999855 544433 899999999999977664 58999999999999999999999999999999999999
Q ss_pred CcccCCCCCccccCCcccceecccCcccCCCCCCCCCCCCcccEEeccCCccccCCCCC
Q 045553 624 ANSLSGEIPSEFSKLEHLNVLRLDHNNLTGRIPPGFGTRSSLSIFDVSFNNLSGSAPRN 682 (1082)
Q Consensus 624 ~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~l~ls~N~l~~~~p~~ 682 (1082)
+|+|++..+..|..+++|++|+|++|+|++.+|..|..+++|++|++++|+|+|.++..
T Consensus 87 ~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~l~ 145 (192)
T 1w8a_A 87 ENKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCHLA 145 (192)
T ss_dssp SCCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGGGH
T ss_pred CCcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcCcch
Confidence 99999988888999999999999999999999999999999999999999999877643
No 374
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.69 E-value=1.9e-17 Score=179.59 Aligned_cols=81 Identities=17% Similarity=0.151 Sum_probs=52.2
Q ss_pred CCCCCcEEEcCCCcccCCCCcccccccCCCeEEcCCccccCCCCccccCCCCCCEEecCCCcCcccCCCCcccCcccEEE
Q 045553 326 RLPNLRVFWAPNLNLEGIFPQNWELCSKLEMLNLAHNFFTGQIPASLGNCKSLYFLDLSSNNLTGLLPEEVSVPCMAVFN 405 (1082)
Q Consensus 326 ~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~l~~L~~L~ 405 (1082)
.+.++..++++++.+.++. .+..+++|++|++++|+++ .++ .+..+++|+.|+|++|+|++..+ ...+++|+.|+
T Consensus 17 ~l~~l~~l~l~~~~i~~~~--~~~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~L~~N~i~~~~~-l~~l~~L~~L~ 91 (263)
T 1xeu_A 17 GLANAVKQNLGKQSVTDLV--SQKELSGVQNFNGDNSNIQ-SLA-GMQFFTNLKELHLSHNQISDLSP-LKDLTKLEELS 91 (263)
T ss_dssp HHHHHHHHHHTCSCTTSEE--CHHHHTTCSEEECTTSCCC-CCT-TGGGCTTCCEEECCSSCCCCCGG-GTTCSSCCEEE
T ss_pred HHHHHHHHHhcCCCccccc--chhhcCcCcEEECcCCCcc-cch-HHhhCCCCCEEECCCCccCCChh-hccCCCCCEEE
Confidence 3555666677777776654 4667777777777777777 444 56777777777777777775544 33445555555
Q ss_pred ecCCcc
Q 045553 406 VSQNLL 411 (1082)
Q Consensus 406 l~~N~l 411 (1082)
+++|++
T Consensus 92 L~~N~l 97 (263)
T 1xeu_A 92 VNRNRL 97 (263)
T ss_dssp CCSSCC
T ss_pred CCCCcc
Confidence 555544
No 375
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.69 E-value=5.4e-17 Score=167.93 Aligned_cols=154 Identities=13% Similarity=0.210 Sum_probs=134.0
Q ss_pred ccCCceeEEEccCCcccccCCccccccCCcccEEEccCCcccccCccccCCCCCCCEEEccCCCCCCCCcccccCCCCCC
Q 045553 515 CLSLDGLIFDIGNNKLIGEVPSDMGSHCKCMKFLSMAGNEFVGLIPQSFTNFDSLRNLNLSRNHLQGPLPSYINKMEDLK 594 (1082)
Q Consensus 515 ~~~~~l~~l~l~~n~l~~~ip~~~~~~~~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~ 594 (1082)
....+++.|++++|++. .+| . +..+++|++|++++|.++.. ..+..+++|++|+|++|.+++..+..|..+++|+
T Consensus 41 ~~l~~L~~L~l~~n~i~-~l~-~-l~~l~~L~~L~l~~n~~~~~--~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~ 115 (197)
T 4ezg_A 41 AQMNSLTYITLANINVT-DLT-G-IEYAHNIKDLTINNIHATNY--NPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLT 115 (197)
T ss_dssp HHHHTCCEEEEESSCCS-CCT-T-GGGCTTCSEEEEESCCCSCC--GGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCC
T ss_pred hhcCCccEEeccCCCcc-ChH-H-HhcCCCCCEEEccCCCCCcc--hhhhcCCCCCEEEeECCccCcccChhhcCCCCCC
Confidence 45567889999999998 777 3 55678899999999987643 4799999999999999999987888999999999
Q ss_pred EEEcCCCcCCccCchhhhcCcccchhhccCcc-cCCCCCccccCCcccceecccCcccCCCCCCCCCCCCcccEEeccCC
Q 045553 595 FLSLSLNNFTGAIPWELTQLASLEVLELSANS-LSGEIPSEFSKLEHLNVLRLDHNNLTGRIPPGFGTRSSLSIFDVSFN 673 (1082)
Q Consensus 595 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~-l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~l~ls~N 673 (1082)
+|+|++|++++..|..|..+++|++|+|++|+ ++ .+| .+..+++|+.|+|++|++++ ++ .+..+++|+.|++++|
T Consensus 116 ~L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~-~~~-~l~~l~~L~~L~l~~n~i~~-~~-~l~~l~~L~~L~l~~N 191 (197)
T 4ezg_A 116 LLDISHSAHDDSILTKINTLPKVNSIDLSYNGAIT-DIM-PLKTLPELKSLNIQFDGVHD-YR-GIEDFPKLNQLYAFSQ 191 (197)
T ss_dssp EEECCSSBCBGGGHHHHTTCSSCCEEECCSCTBCC-CCG-GGGGCSSCCEEECTTBCCCC-CT-TGGGCSSCCEEEECBC
T ss_pred EEEecCCccCcHhHHHHhhCCCCCEEEccCCCCcc-ccH-hhcCCCCCCEEECCCCCCcC-hH-HhccCCCCCEEEeeCc
Confidence 99999999998889999999999999999998 66 555 68999999999999999996 44 7889999999999999
Q ss_pred cccc
Q 045553 674 NLSG 677 (1082)
Q Consensus 674 ~l~~ 677 (1082)
++.+
T Consensus 192 ~i~~ 195 (197)
T 4ezg_A 192 TIGG 195 (197)
T ss_dssp ----
T ss_pred ccCC
Confidence 9864
No 376
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.68 E-value=1e-17 Score=188.46 Aligned_cols=58 Identities=14% Similarity=0.282 Sum_probs=26.1
Q ss_pred cccccEEEcccCccCCCCCccccCCCCccEEEccCCcCCCCcCccccCCCCCCEEeCCC
Q 045553 206 CVSLEHILLAANSLTGSIPPSLGNCTELRSLLLSSNMLQGDIPSSFGQLVNLEVLDLSR 264 (1082)
Q Consensus 206 l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~ 264 (1082)
+++|+.|+|.+ +++...+.+|.++++|+.|++++|.+....+.+|..+.++..+.++.
T Consensus 100 ~~~L~~l~L~~-~i~~I~~~aF~~~~~L~~l~l~~n~i~~i~~~aF~~~~~l~~l~~~~ 157 (329)
T 3sb4_A 100 KQTLEKVILSE-KIKNIEDAAFKGCDNLKICQIRKKTAPNLLPEALADSVTAIFIPLGS 157 (329)
T ss_dssp CTTCCC-CBCT-TCCEECTTTTTTCTTCCEEEBCCSSCCEECTTSSCTTTCEEEECTTC
T ss_pred cCCCcEEECCc-cccchhHHHhhcCcccceEEcCCCCccccchhhhcCCCceEEecCcc
Confidence 44444444444 44433333445555555555555555444444454444444444433
No 377
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.67 E-value=7.5e-17 Score=165.94 Aligned_cols=108 Identities=25% Similarity=0.327 Sum_probs=76.1
Q ss_pred CCCEEEccCCCCCCCCcccccCCCCCCEEEcCCCcCCccCchhhhcCcccchhhccCcccCCCCCccccCCcccceeccc
Q 045553 568 SLRNLNLSRNHLQGPLPSYINKMEDLKFLSLSLNNFTGAIPWELTQLASLEVLELSANSLSGEIPSEFSKLEHLNVLRLD 647 (1082)
Q Consensus 568 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~ 647 (1082)
+|++|+|++|+|+ .+|..|..+++|+.|+|++|+|++..+..|.++++|++|+|++|+|++..|..|..+++|++|+|+
T Consensus 32 ~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~L~ 110 (193)
T 2wfh_A 32 DVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRCIPPRTFDGLKSLRLLSLH 110 (193)
T ss_dssp TCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECC
T ss_pred CCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCCccCEeCHHHhCCCCCCCEEECC
Confidence 4566666666665 445566666666666666666666666666667777777777777776666677778888888888
Q ss_pred CcccCCCCCCCCCCCCcccEEeccCCccc
Q 045553 648 HNNLTGRIPPGFGTRSSLSIFDVSFNNLS 676 (1082)
Q Consensus 648 ~N~l~~~~p~~~~~l~~L~~l~ls~N~l~ 676 (1082)
+|+|++..+..|..+++|+.|++++|+|.
T Consensus 111 ~N~l~~~~~~~~~~l~~L~~L~L~~N~~~ 139 (193)
T 2wfh_A 111 GNDISVVPEGAFNDLSALSHLAIGANPLY 139 (193)
T ss_dssp SSCCCBCCTTTTTTCTTCCEEECCSSCEE
T ss_pred CCCCCeeChhhhhcCccccEEEeCCCCee
Confidence 88888666667888888888888666555
No 378
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.66 E-value=6.4e-17 Score=200.63 Aligned_cols=148 Identities=17% Similarity=0.238 Sum_probs=91.4
Q ss_pred eEEEccCCcccccCCccccccCCcccEEEccCCcccccCccccCCCCCCCEEEccCCCCCCCCcccccCCCCCCEEEcCC
Q 045553 521 LIFDIGNNKLIGEVPSDMGSHCKCMKFLSMAGNEFVGLIPQSFTNFDSLRNLNLSRNHLQGPLPSYINKMEDLKFLSLSL 600 (1082)
Q Consensus 521 ~~l~l~~n~l~~~ip~~~~~~~~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~ 600 (1082)
++|+|++|+|. .+|..+ ..+++|++|+|++|+|+ .+|..|..+++|++|+|++|.|+ .+|..|..+++|+.|+|++
T Consensus 250 ~~L~Ls~N~l~-~lp~~~-~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~-~lp~~~~~l~~L~~L~L~~ 325 (727)
T 4b8c_D 250 TRLYLNGNSLT-ELPAEI-KNLSNLRVLDLSHNRLT-SLPAELGSCFQLKYFYFFDNMVT-TLPWEFGNLCNLQFLGVEG 325 (727)
T ss_dssp SCCBCTTSCCS-CCCGGG-GGGTTCCEEECTTSCCS-SCCSSGGGGTTCSEEECCSSCCC-CCCSSTTSCTTCCCEECTT
T ss_pred CEEEeeCCcCc-ccChhh-hCCCCCCEEeCcCCcCC-ccChhhcCCCCCCEEECCCCCCC-ccChhhhcCCCccEEeCCC
Confidence 45555555555 566554 45677999999999999 56888999999999999999998 6788899999999999999
Q ss_pred CcCCccCchhhhcCcc-cchhhccCcccCCCCCccccCCcccceecccCc--------ccCCCCCCCCCCCCcccEEecc
Q 045553 601 NNFTGAIPWELTQLAS-LEVLELSANSLSGEIPSEFSKLEHLNVLRLDHN--------NLTGRIPPGFGTRSSLSIFDVS 671 (1082)
Q Consensus 601 N~l~~~~p~~~~~l~~-L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N--------~l~~~~p~~~~~l~~L~~l~ls 671 (1082)
|+|++.+|..+..+.. +..|+|++|.+++.+|.. |+.|++++| .|.+..+..+..+..+....++
T Consensus 326 N~l~~~~p~~~~~~~~~~~~l~l~~N~l~~~~p~~------l~~l~l~~n~~~~~~~~~l~~~~~~~~~~l~~~~~~~ls 399 (727)
T 4b8c_D 326 NPLEKQFLKILTEKSVTGLIFYLRDNRPEIPLPHE------RRFIEINTDGEPQREYDSLQQSTEHLATDLAKRTFTVLS 399 (727)
T ss_dssp SCCCSHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC---------------------------------------------
T ss_pred CccCCCChHHHhhcchhhhHHhhccCcccCcCccc------cceeEeecccccccccCCccccccchhhcccccceeeee
Confidence 9999999988876533 345899999999888864 456677777 4554555556666677777777
Q ss_pred CCccccC
Q 045553 672 FNNLSGS 678 (1082)
Q Consensus 672 ~N~l~~~ 678 (1082)
+|-+.+.
T Consensus 400 ~Nil~~~ 406 (727)
T 4b8c_D 400 YNTLCQH 406 (727)
T ss_dssp --CCCGG
T ss_pred ccccccc
Confidence 7766543
No 379
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.63 E-value=9.3e-16 Score=155.66 Aligned_cols=114 Identities=30% Similarity=0.290 Sum_probs=69.8
Q ss_pred CCCCEEEccCCCCCCCCcccccCCCCCCEEEcCCCcCCccCchhhhcCcccchhhccCcccCCCCCccccCCcccceecc
Q 045553 567 DSLRNLNLSRNHLQGPLPSYINKMEDLKFLSLSLNNFTGAIPWELTQLASLEVLELSANSLSGEIPSEFSKLEHLNVLRL 646 (1082)
Q Consensus 567 ~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 646 (1082)
++|++|+|++|++++..+..|..+++|++|+|++|++++..+..|..+++|++|+|++|+|++..+..|..+++|++|+|
T Consensus 28 ~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l 107 (177)
T 2o6r_A 28 SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHENKLQSLPNGVFDKLTQLKELAL 107 (177)
T ss_dssp TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCCCCccccCHHHhhCCcccCEEEC
Confidence 34555555555555444444555555555555555555444445556666666666666666555555666677777777
Q ss_pred cCcccCCCCCCCCCCCCcccEEeccCCccccCCC
Q 045553 647 DHNNLTGRIPPGFGTRSSLSIFDVSFNNLSGSAP 680 (1082)
Q Consensus 647 ~~N~l~~~~p~~~~~l~~L~~l~ls~N~l~~~~p 680 (1082)
++|+|++..+..|..+++|++|++++|+++|.+|
T Consensus 108 ~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 141 (177)
T 2o6r_A 108 DTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 141 (177)
T ss_dssp CSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred cCCcceEeCHHHhcCCcccCEEEecCCCeeccCc
Confidence 7777775555556667777777777777776555
No 380
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.63 E-value=4.5e-16 Score=156.55 Aligned_cols=132 Identities=26% Similarity=0.207 Sum_probs=103.4
Q ss_pred CcccEEEccCCccc-ccCccccCCCCCCCEEEccCCCCCCCCcccccCCCCCCEEEcCCCcCCccCchhhhcCcccchhh
Q 045553 543 KCMKFLSMAGNEFV-GLIPQSFTNFDSLRNLNLSRNHLQGPLPSYINKMEDLKFLSLSLNNFTGAIPWELTQLASLEVLE 621 (1082)
Q Consensus 543 ~~L~~L~L~~N~i~-~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 621 (1082)
++|++|++++|+++ +.+|..|..+++|++|+|++|.|++. ..|..+++|++|+|++|++++.+|..+..+++|++|+
T Consensus 24 ~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 101 (168)
T 2ell_A 24 AAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHLN 101 (168)
T ss_dssp TSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEEE
T ss_pred ccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEEe
Confidence 45788888888887 56677778888888888888888855 6778888888888888888876777777788888888
Q ss_pred ccCcccCCCC-CccccCCcccceecccCcccCCCCC---CCCCCCCcccEEeccCCccc
Q 045553 622 LSANSLSGEI-PSEFSKLEHLNVLRLDHNNLTGRIP---PGFGTRSSLSIFDVSFNNLS 676 (1082)
Q Consensus 622 Ls~N~l~~~~-p~~~~~l~~L~~L~L~~N~l~~~~p---~~~~~l~~L~~l~ls~N~l~ 676 (1082)
|++|+|++.. +..+..+++|+.|+|++|++++..+ ..+..+++|++|++++|.+.
T Consensus 102 Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~~ 160 (168)
T 2ell_A 102 LSGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDREDQ 160 (168)
T ss_dssp CBSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTSC
T ss_pred ccCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCChh
Confidence 8888887542 2677888888888888888885544 36788888888888888776
No 381
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.63 E-value=9.5e-16 Score=157.70 Aligned_cols=128 Identities=27% Similarity=0.379 Sum_probs=118.4
Q ss_pred eEEEccCCcccccCCccccccCCcccEEEccCCcccccCccccCCCCCCCEEEccCCCCCCCCcccccCCCCCCEEEcCC
Q 045553 521 LIFDIGNNKLIGEVPSDMGSHCKCMKFLSMAGNEFVGLIPQSFTNFDSLRNLNLSRNHLQGPLPSYINKMEDLKFLSLSL 600 (1082)
Q Consensus 521 ~~l~l~~n~l~~~ip~~~~~~~~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~ 600 (1082)
.++++++|++. .+|..++ ++|++|+|++|+|+ .+|..|.++++|++|+|++|+|++..+..|.++++|++|+|++
T Consensus 13 ~~l~~~~~~l~-~ip~~~~---~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~ 87 (193)
T 2wfh_A 13 TVVRCSNKGLK-VLPKGIP---RDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSY 87 (193)
T ss_dssp TEEECTTSCCS-SCCSCCC---TTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CEEEcCCCCCC-cCCCCCC---CCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCC
Confidence 57999999988 8998876 46999999999999 5568999999999999999999988889999999999999999
Q ss_pred CcCCccCchhhhcCcccchhhccCcccCCCCCccccCCcccceecccCcccCC
Q 045553 601 NNFTGAIPWELTQLASLEVLELSANSLSGEIPSEFSKLEHLNVLRLDHNNLTG 653 (1082)
Q Consensus 601 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~ 653 (1082)
|+|++..|..|.++++|++|+|++|+|++..+..|..+++|+.|+|++|++..
T Consensus 88 N~l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~C 140 (193)
T 2wfh_A 88 NRLRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYC 140 (193)
T ss_dssp SCCCBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEEC
T ss_pred CccCEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCeec
Confidence 99999888899999999999999999997777789999999999999999983
No 382
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.63 E-value=2.1e-16 Score=177.78 Aligned_cols=102 Identities=17% Similarity=0.107 Sum_probs=57.5
Q ss_pred CCCCCEEeCCCCcCcccCCccccCCCCCcEEEeccccCCcccccCCCCCCcccccCCCcccccCCCCCccccCCCCCc-E
Q 045553 254 LVNLEVLDLSRNFLSGIVPSELGMCKQLKVLVLRNDYGPLYSREHGDLPIQPVVDGGEDYNFFDGGLPDSITRLPNLR-V 332 (1082)
Q Consensus 254 l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~n~~~~~~~~~~~l~~~~~~~~~~~~n~~~~~~p~~l~~l~~L~-~ 332 (1082)
+++|+.|+|++|+++.+.+.+|..+++|+.|++.+| +....+.+|.++++|+ .
T Consensus 225 ~~~L~~l~L~~n~i~~I~~~aF~~~~~L~~l~l~~n--------------------------i~~I~~~aF~~~~~L~~~ 278 (329)
T 3sb4_A 225 MPNLVSLDISKTNATTIPDFTFAQKKYLLKIKLPHN--------------------------LKTIGQRVFSNCGRLAGT 278 (329)
T ss_dssp CTTCCEEECTTBCCCEECTTTTTTCTTCCEEECCTT--------------------------CCEECTTTTTTCTTCCEE
T ss_pred cCCCeEEECCCCCcceecHhhhhCCCCCCEEECCcc--------------------------cceehHHHhhCChhccEE
Confidence 456666666666666555556666666666666543 1122234455555565 5
Q ss_pred EEcCCCcccCCCCcccccccCCCeEEcCCccccCCCCccccCCCCCCEEe
Q 045553 333 FWAPNLNLEGIFPQNWELCSKLEMLNLAHNFFTGQIPASLGNCKSLYFLD 382 (1082)
Q Consensus 333 L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~ 382 (1082)
+.+.+ .+..+.+.+|.++++|+.|++++|+++...+..|.++++|+.++
T Consensus 279 l~l~~-~l~~I~~~aF~~c~~L~~l~l~~n~i~~I~~~aF~~~~~L~~ly 327 (329)
T 3sb4_A 279 LELPA-SVTAIEFGAFMGCDNLRYVLATGDKITTLGDELFGNGVPSKLIY 327 (329)
T ss_dssp EEECT-TCCEECTTTTTTCTTEEEEEECSSCCCEECTTTTCTTCCCCEEE
T ss_pred EEEcc-cceEEchhhhhCCccCCEEEeCCCccCccchhhhcCCcchhhhc
Confidence 55555 55555555566666666666655555544444555555555554
No 383
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.62 E-value=1.5e-15 Score=154.21 Aligned_cols=132 Identities=23% Similarity=0.301 Sum_probs=119.7
Q ss_pred eEEEccCCcccccCCccccccCCcccEEEccCCcccccCccccCCCCCCCEEEccCCCCCCCCcccccCCCCCCEEEcCC
Q 045553 521 LIFDIGNNKLIGEVPSDMGSHCKCMKFLSMAGNEFVGLIPQSFTNFDSLRNLNLSRNHLQGPLPSYINKMEDLKFLSLSL 600 (1082)
Q Consensus 521 ~~l~l~~n~l~~~ip~~~~~~~~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~ 600 (1082)
..+++++|++. .+|..++ ++|++|++++|+++++.+..|..+++|++|+|++|+|++..+..|..+++|++|+|++
T Consensus 10 ~~l~~~~~~l~-~~p~~~~---~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~ 85 (177)
T 2o6r_A 10 TEIRCNSKGLT-SVPTGIP---SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHE 85 (177)
T ss_dssp TEEECCSSCCS-SCCTTCC---TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CEEEecCCCCc-cCCCCCC---CCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCC
Confidence 58999999988 7887765 5699999999999998888999999999999999999988778899999999999999
Q ss_pred CcCCccCchhhhcCcccchhhccCcccCCCCCccccCCcccceecccCcccCCCCC
Q 045553 601 NNFTGAIPWELTQLASLEVLELSANSLSGEIPSEFSKLEHLNVLRLDHNNLTGRIP 656 (1082)
Q Consensus 601 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p 656 (1082)
|+|++..+..|..+++|++|+|++|+|++..+..|..+++|++|+|++|++++..|
T Consensus 86 N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 141 (177)
T 2o6r_A 86 NKLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 141 (177)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred CCccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCeeccCc
Confidence 99998888889999999999999999997777778899999999999999996543
No 384
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.61 E-value=4.6e-16 Score=153.00 Aligned_cols=128 Identities=23% Similarity=0.205 Sum_probs=107.7
Q ss_pred CcccEEEccCCccc-ccCccccCCCCCCCEEEccCCCCCCCCcccccCCCCCCEEEcCCCcCCccCchhhhcCcccchhh
Q 045553 543 KCMKFLSMAGNEFV-GLIPQSFTNFDSLRNLNLSRNHLQGPLPSYINKMEDLKFLSLSLNNFTGAIPWELTQLASLEVLE 621 (1082)
Q Consensus 543 ~~L~~L~L~~N~i~-~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 621 (1082)
++|+.|++++|+++ +.+|..+..+++|++|+|++|.+++. ..|..+++|++|+|++|++++.+|..+..+++|++|+
T Consensus 17 ~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~ 94 (149)
T 2je0_A 17 SDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHLN 94 (149)
T ss_dssp GGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEEE
T ss_pred ccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEEE
Confidence 55888899999888 67788888899999999999999865 6788899999999999999877888888889999999
Q ss_pred ccCcccCCC-CCccccCCcccceecccCcccCCCCC---CCCCCCCcccEEeccC
Q 045553 622 LSANSLSGE-IPSEFSKLEHLNVLRLDHNNLTGRIP---PGFGTRSSLSIFDVSF 672 (1082)
Q Consensus 622 Ls~N~l~~~-~p~~~~~l~~L~~L~L~~N~l~~~~p---~~~~~l~~L~~l~ls~ 672 (1082)
|++|++++. .+..+..+++|++|++++|++++..+ ..+..+++|+.||+++
T Consensus 95 ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~d 149 (149)
T 2je0_A 95 LSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDGYD 149 (149)
T ss_dssp CTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEETTBC
T ss_pred CCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcccccCCC
Confidence 999999863 34778889999999999999986655 4688888999988863
No 385
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.61 E-value=1.6e-15 Score=152.55 Aligned_cols=137 Identities=22% Similarity=0.251 Sum_probs=121.4
Q ss_pred CceeEEEccCCccc-ccCCccccccCCcccEEEccCCcccccCccccCCCCCCCEEEccCCCCCCCCcccccCCCCCCEE
Q 045553 518 LDGLIFDIGNNKLI-GEVPSDMGSHCKCMKFLSMAGNEFVGLIPQSFTNFDSLRNLNLSRNHLQGPLPSYINKMEDLKFL 596 (1082)
Q Consensus 518 ~~l~~l~l~~n~l~-~~ip~~~~~~~~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 596 (1082)
.++++|++++|++. +.+|.. +..+++|++|++++|+|++. ..|..+++|++|+|++|++++.+|..+..+++|++|
T Consensus 24 ~~L~~L~l~~n~l~~~~i~~~-~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 100 (168)
T 2ell_A 24 AAVRELVLDNCKSNDGKIEGL-TAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHL 100 (168)
T ss_dssp TSCSEEECCSCBCBTTBCSSC-CGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEE
T ss_pred ccCCEEECCCCCCChhhHHHH-HHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEE
Confidence 56789999999998 788877 56678899999999999977 789999999999999999998788888889999999
Q ss_pred EcCCCcCCccC-chhhhcCcccchhhccCcccCCCCC---ccccCCcccceecccCcccCCCCCCC
Q 045553 597 SLSLNNFTGAI-PWELTQLASLEVLELSANSLSGEIP---SEFSKLEHLNVLRLDHNNLTGRIPPG 658 (1082)
Q Consensus 597 ~Ls~N~l~~~~-p~~~~~l~~L~~L~Ls~N~l~~~~p---~~~~~l~~L~~L~L~~N~l~~~~p~~ 658 (1082)
+|++|++++.. +..+..+++|++|+|++|++++..+ ..+..+++|++|++++|.+. .+|+.
T Consensus 101 ~Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~~-~~~~~ 165 (168)
T 2ell_A 101 NLSGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDREDQ-EAPDS 165 (168)
T ss_dssp ECBSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTSC-BCCSS
T ss_pred eccCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCChh-hcccc
Confidence 99999999643 2789999999999999999996655 48999999999999999998 55544
No 386
>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A
Probab=99.57 E-value=1.7e-15 Score=169.44 Aligned_cols=144 Identities=13% Similarity=0.123 Sum_probs=103.4
Q ss_pred HHHHHhcCccccceecccCceEEEEEEEcCCeEEEEEEeecCcc--------------ccHHH--------HHHHHHHHh
Q 045553 795 NVVRATAGFNVQNCIGSGGFGATYKAEIIPGVVVAVKRLSVGRF--------------QGVQQ--------FAAEIRTLG 852 (1082)
Q Consensus 795 ~~~~~~~~~~~~~~lg~G~~g~Vy~a~~~~~~~vavK~~~~~~~--------------~~~~~--------~~~e~~~l~ 852 (1082)
.+.....=|.+.++||+|+||.||+|...+|+.||||+++.... ..... ..+|+..+.
T Consensus 89 ~L~~rg~iY~I~~~IG~Gk~a~VY~a~d~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~ 168 (397)
T 4gyi_A 89 THAARKDVYSVGSRIGVGKESDIMIVADEKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMK 168 (397)
T ss_dssp HHHHTTSCSEEEEEEEECSSEEEEEEECTTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHCCCEEEecCEeeeCCceEEEEEECCCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHH
Confidence 33344444999999999999999999888899999998753211 00111 234555666
Q ss_pred ccCCCcee--eEeeeeccCCeEEEEEeecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCC
Q 045553 853 RVQHPNLV--TLIGYHVSEAEMFLIYNYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKP 930 (1082)
Q Consensus 853 ~l~h~niv--~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~ 930 (1082)
++.+.++. ..+++ ...++||||++|++|.++... +....++.|++.++.|||+. +||||||||
T Consensus 169 rL~~~gv~vp~p~~~----~~~~LVME~i~G~~L~~l~~~--------~~~~~l~~qll~~l~~lH~~---gIVHrDLKp 233 (397)
T 4gyi_A 169 ALYEEGFPVPEPIAQ----SRHTIVMSLVDALPMRQVSSV--------PDPASLYADLIALILRLAKH---GLIHGDFNE 233 (397)
T ss_dssp HHHHTTCSCCCEEEE----ETTEEEEECCSCEEGGGCCCC--------SCHHHHHHHHHHHHHHHHHT---TEECSCCST
T ss_pred HHHhcCCCCCeeeec----cCceEEEEecCCccHhhhccc--------HHHHHHHHHHHHHHHHHHHC---CCcCCCCCH
Confidence 65444332 12221 234799999999888665432 13456889999999999999 999999999
Q ss_pred CCEEEcCCC----------cEEEeecccceecC
Q 045553 931 SNILLDNNL----------NAYLSDFGLARLLG 953 (1082)
Q Consensus 931 ~Nill~~~~----------~~kl~DfGla~~~~ 953 (1082)
.|||+++++ .+.|+||+-+....
T Consensus 234 ~NILl~~dgd~~d~~~~~~~~~iID~~Q~V~~~ 266 (397)
T 4gyi_A 234 FNILIREEKDAEDPSSITLTPIIIXFPQMVSMD 266 (397)
T ss_dssp TSEEEEEEECSSCTTSEEEEEEECCCTTCEETT
T ss_pred HHEEEeCCCCcccccccccceEEEEeCCcccCC
Confidence 999998776 38999999876543
No 387
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.55 E-value=4e-15 Score=146.26 Aligned_cols=129 Identities=21% Similarity=0.217 Sum_probs=83.3
Q ss_pred CCCCCEEEcccCCCc-ccCChhhcCCCCCCEEeCcCCCCCCCCCccccCCCCCCeEEccCcccccccCccccCCCCCcEE
Q 045553 109 LTQLRVLLLAFNGFS-GELPLEIGQLSLLEILDLSFNSFHGPIPPTLQNCSSLRLINLSGNQFNGTIPAFFGQSPGFQVV 187 (1082)
Q Consensus 109 l~~L~~L~L~~n~l~-~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 187 (1082)
.++|+.|++++|.++ +.+|..+..+++|++|+|++|.+++. ..+.++++|++|+|++|++++.+|..+..+++|++|
T Consensus 16 ~~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L 93 (149)
T 2je0_A 16 PSDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHL 93 (149)
T ss_dssp GGGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEE
T ss_pred CccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEE
Confidence 356777777777777 66777777777777777777777744 567777777777777777776566666666666666
Q ss_pred EcccCcccccCCcccccccccccEEEcccCccCCCCCccccCCCCccEEEccCCcCCCCcC---ccccCCCCCCEEeCC
Q 045553 188 SLSFNLLSGSVPEEFGDNCVSLEHILLAANSLTGSIPPSLGNCTELRSLLLSSNMLQGDIP---SSFGQLVNLEVLDLS 263 (1082)
Q Consensus 188 ~L~~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p---~~~~~l~~L~~L~Ls 263 (1082)
++++|++++ +| .+..+..+++|++|++++|.+++..+ ..+..+++|++|+++
T Consensus 94 ~ls~N~i~~-~~-----------------------~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~ 148 (149)
T 2je0_A 94 NLSGNKIKD-LS-----------------------TIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDGY 148 (149)
T ss_dssp ECTTSCCCS-HH-----------------------HHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEETTB
T ss_pred ECCCCcCCC-hH-----------------------HHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcccccCC
Confidence 666666652 11 12344555555566666665554333 345556666666554
No 388
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=99.53 E-value=2e-13 Score=156.65 Aligned_cols=118 Identities=9% Similarity=0.081 Sum_probs=63.1
Q ss_pred ccccCccccCCCCCCCEEEccCCCCC-----CCCcccccCCCCCCEEEcCCCcCCccCchhhhcCcccchhhccCcccCC
Q 045553 555 FVGLIPQSFTNFDSLRNLNLSRNHLQ-----GPLPSYINKMEDLKFLSLSLNNFTGAIPWELTQLASLEVLELSANSLSG 629 (1082)
Q Consensus 555 i~~~~~~~~~~l~~L~~L~L~~N~l~-----~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 629 (1082)
++.+.+.+|.++++|+.+++.+|.+. .+.+..|.++++|+.++|. +.++.+-...|.+|.+|+.++|.+| ++.
T Consensus 259 i~~I~~~aF~~c~~L~~l~l~~~~~~~~~~~~I~~~aF~~c~~L~~l~l~-~~i~~I~~~aF~~c~~L~~l~lp~~-l~~ 336 (401)
T 4fdw_A 259 VTNIASRAFYYCPELAEVTTYGSTFNDDPEAMIHPYCLEGCPKLARFEIP-ESIRILGQGLLGGNRKVTQLTIPAN-VTQ 336 (401)
T ss_dssp CCEECTTTTTTCTTCCEEEEESSCCCCCTTCEECTTTTTTCTTCCEECCC-TTCCEECTTTTTTCCSCCEEEECTT-CCE
T ss_pred ccEEChhHhhCCCCCCEEEeCCccccCCcccEECHHHhhCCccCCeEEeC-CceEEEhhhhhcCCCCccEEEECcc-ccE
Confidence 33344444555555555555444433 2344455555555555555 3355455555666666666666443 443
Q ss_pred CCCccccCCcccceecccCcccCCCCCCCCCCCC-cccEEeccCCcc
Q 045553 630 EIPSEFSKLEHLNVLRLDHNNLTGRIPPGFGTRS-SLSIFDVSFNNL 675 (1082)
Q Consensus 630 ~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~-~L~~l~ls~N~l 675 (1082)
+....|.++ +|+.+++++|.+....+..|..++ +++.|++..|.+
T Consensus 337 I~~~aF~~~-~L~~l~l~~n~~~~l~~~~F~~~~~~l~~l~vp~~~~ 382 (401)
T 4fdw_A 337 INFSAFNNT-GIKEVKVEGTTPPQVFEKVWYGFPDDITVIRVPAESV 382 (401)
T ss_dssp ECTTSSSSS-CCCEEEECCSSCCBCCCSSCCCSCTTCCEEEECGGGH
T ss_pred EcHHhCCCC-CCCEEEEcCCCCcccccccccCCCCCccEEEeCHHHH
Confidence 445556666 666666666666655555565553 566666655543
No 389
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=99.53 E-value=3.3e-13 Score=154.92 Aligned_cols=270 Identities=12% Similarity=0.088 Sum_probs=213.1
Q ss_pred CCCCCEEEcccCCCcccCChhhcCCCCCCEEeCcCCCCCCCCCccccCCCCCCeEEccCcccccccCccccCCCCCcEEE
Q 045553 109 LTQLRVLLLAFNGFSGELPLEIGQLSLLEILDLSFNSFHGPIPPTLQNCSSLRLINLSGNQFNGTIPAFFGQSPGFQVVS 188 (1082)
Q Consensus 109 l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 188 (1082)
...++.+.+.+ .++..-..+|.+. +|+.++|..+ ++..-..+|.+. +|+.+.+.+ .++...+.+|.++++|+.++
T Consensus 112 ~~~l~~i~ip~-~i~~I~~~aF~~~-~L~~i~l~~~-i~~I~~~aF~~~-~L~~i~lp~-~l~~I~~~aF~~c~~L~~l~ 186 (401)
T 4fdw_A 112 LKGYNEIILPN-SVKSIPKDAFRNS-QIAKVVLNEG-LKSIGDMAFFNS-TVQEIVFPS-TLEQLKEDIFYYCYNLKKAD 186 (401)
T ss_dssp CSSCSEEECCT-TCCEECTTTTTTC-CCSEEECCTT-CCEECTTTTTTC-CCCEEECCT-TCCEECSSTTTTCTTCCEEE
T ss_pred cCCccEEEECC-ccCEehHhhcccC-CccEEEeCCC-ccEECHHhcCCC-CceEEEeCC-CccEehHHHhhCcccCCeee
Confidence 46778888865 4554556678774 7999999877 665566678774 799999986 67767778999999999999
Q ss_pred cccCcccccCCcccccccccccEEEcccCccCCCCCccccCCCCccEEEccCCcCCCCcCccccCCCCCCEEeCCCCcCc
Q 045553 189 LSFNLLSGSVPEEFGDNCVSLEHILLAANSLTGSIPPSLGNCTELRSLLLSSNMLQGDIPSSFGQLVNLEVLDLSRNFLS 268 (1082)
Q Consensus 189 L~~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 268 (1082)
|..|+++ .++...+. ..+|+.+.|..+ ++.....+|.++++|+.+++..| ++.....+|.+ .+|+.+.+ .+.++
T Consensus 187 l~~n~l~-~I~~~aF~-~~~L~~l~lp~~-l~~I~~~aF~~~~~L~~l~l~~~-l~~I~~~aF~~-~~L~~i~l-p~~i~ 260 (401)
T 4fdw_A 187 LSKTKIT-KLPASTFV-YAGIEEVLLPVT-LKEIGSQAFLKTSQLKTIEIPEN-VSTIGQEAFRE-SGITTVKL-PNGVT 260 (401)
T ss_dssp CTTSCCS-EECTTTTT-TCCCSEEECCTT-CCEECTTTTTTCTTCCCEECCTT-CCEECTTTTTT-CCCSEEEE-ETTCC
T ss_pred cCCCcce-EechhhEe-ecccCEEEeCCc-hheehhhHhhCCCCCCEEecCCC-ccCcccccccc-CCccEEEe-CCCcc
Confidence 9999998 77777765 689999999854 77677778999999999999875 56566777887 89999999 45677
Q ss_pred ccCCccccCCCCCcEEEeccccCCcccccCCCCCCcccccCCCcccccCCCCCccccCCCCCcEEEcCCCcccCCCCccc
Q 045553 269 GIVPSELGMCKQLKVLVLRNDYGPLYSREHGDLPIQPVVDGGEDYNFFDGGLPDSITRLPNLRVFWAPNLNLEGIFPQNW 348 (1082)
Q Consensus 269 ~~~p~~l~~l~~L~~L~l~~n~~~~~~~~~~~l~~~~~~~~~~~~n~~~~~~p~~l~~l~~L~~L~l~~n~l~~~~~~~l 348 (1082)
.+...+|..+++|+.+.+.+|.... +......+..|.++++|+.+.+. +.+..+...+|
T Consensus 261 ~I~~~aF~~c~~L~~l~l~~~~~~~--------------------~~~~~I~~~aF~~c~~L~~l~l~-~~i~~I~~~aF 319 (401)
T 4fdw_A 261 NIASRAFYYCPELAEVTTYGSTFND--------------------DPEAMIHPYCLEGCPKLARFEIP-ESIRILGQGLL 319 (401)
T ss_dssp EECTTTTTTCTTCCEEEEESSCCCC--------------------CTTCEECTTTTTTCTTCCEECCC-TTCCEECTTTT
T ss_pred EEChhHhhCCCCCCEEEeCCccccC--------------------CcccEECHHHhhCCccCCeEEeC-CceEEEhhhhh
Confidence 6778899999999999998764320 11122345678899999999999 45888888999
Q ss_pred ccccCCCeEEcCCccccCCCCccccCCCCCCEEecCCCcCcccCCCCc-cc-CcccEEEecCCcce
Q 045553 349 ELCSKLEMLNLAHNFFTGQIPASLGNCKSLYFLDLSSNNLTGLLPEEV-SV-PCMAVFNVSQNLLS 412 (1082)
Q Consensus 349 ~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~-~l-~~L~~L~l~~N~l~ 412 (1082)
.++.+|+.++|..| ++......|.++ +|+.+++++|.+....+..+ .+ ..++.|.+-.+.+.
T Consensus 320 ~~c~~L~~l~lp~~-l~~I~~~aF~~~-~L~~l~l~~n~~~~l~~~~F~~~~~~l~~l~vp~~~~~ 383 (401)
T 4fdw_A 320 GGNRKVTQLTIPAN-VTQINFSAFNNT-GIKEVKVEGTTPPQVFEKVWYGFPDDITVIRVPAESVE 383 (401)
T ss_dssp TTCCSCCEEEECTT-CCEECTTSSSSS-CCCEEEECCSSCCBCCCSSCCCSCTTCCEEEECGGGHH
T ss_pred cCCCCccEEEECcc-ccEEcHHhCCCC-CCCEEEEcCCCCcccccccccCCCCCccEEEeCHHHHH
Confidence 99999999999665 765677889999 99999999999887776666 34 36778887776553
No 390
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.52 E-value=7.3e-15 Score=148.82 Aligned_cols=130 Identities=18% Similarity=0.160 Sum_probs=98.9
Q ss_pred cCCcccEEEccCCcccccCccccCCC-CCCCEEEccCCCCCCCCcccccCCCCCCEEEcCCCcCCccCchhhhcCcccch
Q 045553 541 HCKCMKFLSMAGNEFVGLIPQSFTNF-DSLRNLNLSRNHLQGPLPSYINKMEDLKFLSLSLNNFTGAIPWELTQLASLEV 619 (1082)
Q Consensus 541 ~~~~L~~L~L~~N~i~~~~~~~~~~l-~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 619 (1082)
.+.+|++|++++|+|+.+ |. +..+ ++|++|+|++|.|++. ..|..+++|++|+|++|+|++..+..|..+++|++
T Consensus 17 ~~~~L~~L~l~~n~l~~i-~~-~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~ 92 (176)
T 1a9n_A 17 NAVRDRELDLRGYKIPVI-EN-LGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDLTE 92 (176)
T ss_dssp CTTSCEEEECTTSCCCSC-CC-GGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTTCCE
T ss_pred CcCCceEEEeeCCCCchh-HH-hhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCCCCE
Confidence 345678888888888754 44 4444 4888888888888854 57788888888888888888665566688888888
Q ss_pred hhccCcccCCCCCc--cccCCcccceecccCcccCCCCCCC----CCCCCcccEEeccCCccc
Q 045553 620 LELSANSLSGEIPS--EFSKLEHLNVLRLDHNNLTGRIPPG----FGTRSSLSIFDVSFNNLS 676 (1082)
Q Consensus 620 L~Ls~N~l~~~~p~--~~~~l~~L~~L~L~~N~l~~~~p~~----~~~l~~L~~l~ls~N~l~ 676 (1082)
|+|++|+|+ .+|. .+..+++|+.|+|++|+++ .+|.. +..+++|+.||+++|.+.
T Consensus 93 L~L~~N~i~-~~~~~~~l~~l~~L~~L~l~~N~i~-~~~~~~~~~~~~l~~L~~Ld~~~n~~~ 153 (176)
T 1a9n_A 93 LILTNNSLV-ELGDLDPLASLKSLTYLCILRNPVT-NKKHYRLYVIYKVPQVRVLDFQKVKLK 153 (176)
T ss_dssp EECCSCCCC-CGGGGGGGGGCTTCCEEECCSSGGG-GSTTHHHHHHHHCTTCSEETTEECCHH
T ss_pred EECCCCcCC-cchhhHhhhcCCCCCEEEecCCCCC-CcHhHHHHHHHHCCccceeCCCcCCHH
Confidence 888888886 4555 6788888888888888888 45654 778888888888888765
No 391
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=99.51 E-value=4.2e-13 Score=154.78 Aligned_cols=153 Identities=19% Similarity=0.201 Sum_probs=82.4
Q ss_pred hhhcCCCCCCEEeCcCCCCCCCCCccccCCCCCCeEEccCcccccccCccccCCCCCcEEEcccCcccccCCcccccccc
Q 045553 128 LEIGQLSLLEILDLSFNSFHGPIPPTLQNCSSLRLINLSGNQFNGTIPAFFGQSPGFQVVSLSFNLLSGSVPEEFGDNCV 207 (1082)
Q Consensus 128 ~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~ 207 (1082)
.+|.++.+|+.+.|..+ ++..-..+|.++++|+.++|.++ ++.....+|.++++|+.+.+..+ +. .+....+..+.
T Consensus 65 ~AF~~c~~L~~i~lp~~-i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~c~~L~~i~~p~~-l~-~i~~~aF~~~~ 140 (394)
T 4fs7_A 65 AAFQGCRKVTEIKIPST-VREIGEFAFENCSKLEIINIPDS-VKMIGRCTFSGCYALKSILLPLM-LK-SIGVEAFKGCD 140 (394)
T ss_dssp TTTTTCTTEEEEECCTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCCCCCCTT-CC-EECTTTTTTCC
T ss_pred HHhhCCCCceEEEeCCC-ccCcchhHhhCCCCCcEEEeCCC-ceEccchhhcccccchhhcccCc-ee-eecceeeeccc
Confidence 34555555555555422 44233344555555555555433 33333445555555555444333 22 22222222332
Q ss_pred cccEEEcccCccCCCCCccccCCCCccEEEccCCcCCCCcCccccCCCCCCEEeCCCCcCcccCCccccCCCCCcEEEec
Q 045553 208 SLEHILLAANSLTGSIPPSLGNCTELRSLLLSSNMLQGDIPSSFGQLVNLEVLDLSRNFLSGIVPSELGMCKQLKVLVLR 287 (1082)
Q Consensus 208 ~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~ 287 (1082)
.++ .... +.+......+|.++++|+.+.+.++... .....|.++++|+.+++..| ++.+...+|..+..|+.+.+.
T Consensus 141 ~~~-~~~~-~~~~~i~~~aF~~c~~L~~i~l~~~~~~-I~~~~F~~c~~L~~i~l~~~-~~~I~~~~F~~~~~L~~i~~~ 216 (394)
T 4fs7_A 141 FKE-ITIP-EGVTVIGDEAFATCESLEYVSLPDSMET-LHNGLFSGCGKLKSIKLPRN-LKIIRDYCFAECILLENMEFP 216 (394)
T ss_dssp CSE-EECC-TTCCEECTTTTTTCTTCCEEECCTTCCE-ECTTTTTTCTTCCBCCCCTT-CCEECTTTTTTCTTCCBCCCC
T ss_pred ccc-cccC-ccccccchhhhcccCCCcEEecCCccce-eccccccCCCCceEEEcCCC-ceEeCchhhccccccceeecC
Confidence 222 2221 1122233456788888888888765433 55677888888888888776 554666777777777777664
Q ss_pred c
Q 045553 288 N 288 (1082)
Q Consensus 288 ~ 288 (1082)
+
T Consensus 217 ~ 217 (394)
T 4fs7_A 217 N 217 (394)
T ss_dssp T
T ss_pred C
Confidence 4
No 392
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.49 E-value=5.3e-14 Score=141.41 Aligned_cols=109 Identities=25% Similarity=0.239 Sum_probs=75.4
Q ss_pred CCEEEccCCCCCCCCcccccCCCCCCEEEcCCCcCCccCchhhhcCcccchhhccCcccCCCCCccccCCcccceecccC
Q 045553 569 LRNLNLSRNHLQGPLPSYINKMEDLKFLSLSLNNFTGAIPWELTQLASLEVLELSANSLSGEIPSEFSKLEHLNVLRLDH 648 (1082)
Q Consensus 569 L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~ 648 (1082)
.++|++++|.|+ .+|..+. ++|++|+|++|+|++..|..|.++++|++|+|++|+|++..+..|..+++|++|+|++
T Consensus 11 ~~~l~~s~n~l~-~ip~~~~--~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~ 87 (170)
T 3g39_A 11 GTTVDCSGKSLA-SVPTGIP--TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLND 87 (170)
T ss_dssp TTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCEEEeCCCCcC-ccCccCC--CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCC
Confidence 355666666666 3444442 5667777777777766666677777777777777777766666677777777888888
Q ss_pred cccCCCCCCCCCCCCcccEEeccCCccccCCC
Q 045553 649 NNLTGRIPPGFGTRSSLSIFDVSFNNLSGSAP 680 (1082)
Q Consensus 649 N~l~~~~p~~~~~l~~L~~l~ls~N~l~~~~p 680 (1082)
|+|++..+..|..+++|+.|+|++|+|++.++
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~~~c~c~ 119 (170)
T 3g39_A 88 NQLKSIPRGAFDNLKSLTHIWLLNNPWDCACS 119 (170)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCBCTTBG
T ss_pred CccCEeCHHHhcCCCCCCEEEeCCCCCCCCch
Confidence 88776666667778888888887777775554
No 393
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.48 E-value=3.9e-14 Score=143.43 Aligned_cols=132 Identities=19% Similarity=0.233 Sum_probs=114.8
Q ss_pred cCCceeEEEccCCcccccCCccccccCCcccEEEccCCcccccCccccCCCCCCCEEEccCCCCCCCCcccccCCCCCCE
Q 045553 516 LSLDGLIFDIGNNKLIGEVPSDMGSHCKCMKFLSMAGNEFVGLIPQSFTNFDSLRNLNLSRNHLQGPLPSYINKMEDLKF 595 (1082)
Q Consensus 516 ~~~~l~~l~l~~n~l~~~ip~~~~~~~~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~ 595 (1082)
...++++|++++|++. .+|. +....++|++|++++|+|++. ..|..+++|++|+|++|+|++..+..|..+++|++
T Consensus 17 ~~~~L~~L~l~~n~l~-~i~~-~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~ 92 (176)
T 1a9n_A 17 NAVRDRELDLRGYKIP-VIEN-LGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDLTE 92 (176)
T ss_dssp CTTSCEEEECTTSCCC-SCCC-GGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTTCCE
T ss_pred CcCCceEEEeeCCCCc-hhHH-hhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCCCCE
Confidence 4567789999999998 5654 555555899999999999987 68999999999999999999776667799999999
Q ss_pred EEcCCCcCCccCch--hhhcCcccchhhccCcccCCCCCcc----ccCCcccceecccCcccCC
Q 045553 596 LSLSLNNFTGAIPW--ELTQLASLEVLELSANSLSGEIPSE----FSKLEHLNVLRLDHNNLTG 653 (1082)
Q Consensus 596 L~Ls~N~l~~~~p~--~~~~l~~L~~L~Ls~N~l~~~~p~~----~~~l~~L~~L~L~~N~l~~ 653 (1082)
|+|++|+|+ .+|. .+..+++|+.|+|++|.++ .+|.. +..+++|+.||+++|.+..
T Consensus 93 L~L~~N~i~-~~~~~~~l~~l~~L~~L~l~~N~i~-~~~~~~~~~~~~l~~L~~Ld~~~n~~~~ 154 (176)
T 1a9n_A 93 LILTNNSLV-ELGDLDPLASLKSLTYLCILRNPVT-NKKHYRLYVIYKVPQVRVLDFQKVKLKE 154 (176)
T ss_dssp EECCSCCCC-CGGGGGGGGGCTTCCEEECCSSGGG-GSTTHHHHHHHHCTTCSEETTEECCHHH
T ss_pred EECCCCcCC-cchhhHhhhcCCCCCEEEecCCCCC-CcHhHHHHHHHHCCccceeCCCcCCHHH
Confidence 999999997 5665 8999999999999999998 55654 8999999999999998763
No 394
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.46 E-value=1.5e-13 Score=138.57 Aligned_cols=105 Identities=26% Similarity=0.257 Sum_probs=59.7
Q ss_pred CEEEccCCCCCCCCcccccCCCCCCEEEcCCCcCCccCchhhhcCcccchhhccCcccCCCCCccccCCcccceecccCc
Q 045553 570 RNLNLSRNHLQGPLPSYINKMEDLKFLSLSLNNFTGAIPWELTQLASLEVLELSANSLSGEIPSEFSKLEHLNVLRLDHN 649 (1082)
Q Consensus 570 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N 649 (1082)
+.+++++|+++ .+|..+. ++|++|+|++|+|++..|..|.++++|++|+|++|+|++..+..|..+++|++|+|++|
T Consensus 15 ~~l~~~~n~l~-~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N 91 (174)
T 2r9u_A 15 TLVNCQNIRLA-SVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDN 91 (174)
T ss_dssp SEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred cEEEeCCCCCC-ccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCC
Confidence 34555555554 3333332 45555555555555555555555555666666666665444444566666666666666
Q ss_pred ccCCCCCCCCCCCCcccEEeccCCcccc
Q 045553 650 NLTGRIPPGFGTRSSLSIFDVSFNNLSG 677 (1082)
Q Consensus 650 ~l~~~~p~~~~~l~~L~~l~ls~N~l~~ 677 (1082)
+|++..+..|..+++|+.|+|++|+|.+
T Consensus 92 ~l~~l~~~~~~~l~~L~~L~L~~N~~~c 119 (174)
T 2r9u_A 92 HLKSIPRGAFDNLKSLTHIYLYNNPWDC 119 (174)
T ss_dssp CCCCCCTTTTTTCTTCSEEECCSSCBCT
T ss_pred ccceeCHHHhccccCCCEEEeCCCCccc
Confidence 6665544456666666666666665553
No 395
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.45 E-value=7.1e-16 Score=159.65 Aligned_cols=150 Identities=21% Similarity=0.224 Sum_probs=80.5
Q ss_pred ccCCCCCCEEEcccCCCcccCCh------hhcCCCCCCEEeCcCCCCCCCCCccccCCCCCCeEEccCcccccccCcccc
Q 045553 106 IGDLTQLRVLLLAFNGFSGELPL------EIGQLSLLEILDLSFNSFHGPIPPTLQNCSSLRLINLSGNQFNGTIPAFFG 179 (1082)
Q Consensus 106 l~~l~~L~~L~L~~n~l~~~~p~------~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~ 179 (1082)
+.....++.++++.+.+++.+|. .|..+++|++|+|++|.+++ +| .+.++++|++|+|++|+++ .+|..+.
T Consensus 14 ~~~~~~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~ 90 (198)
T 1ds9_A 14 FEERKSVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDA 90 (198)
T ss_dssp HHHTTCCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHHH
T ss_pred HHhcccccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchhh
Confidence 44555666666666666665554 56666666666666666663 44 5566666666666666665 4454444
Q ss_pred CCCCCcEEEcccCcccccCCcccccccccccEEEcccCccCCCCCccccCCCCccEEEccCCcCCCCcC-ccccCCCCCC
Q 045553 180 QSPGFQVVSLSFNLLSGSVPEEFGDNCVSLEHILLAANSLTGSIPPSLGNCTELRSLLLSSNMLQGDIP-SSFGQLVNLE 258 (1082)
Q Consensus 180 ~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~ 258 (1082)
.+++|+.|+|++|++++ +| .+..+++|++|++++|++++..+ ..+..+++|+
T Consensus 91 ~~~~L~~L~L~~N~l~~-l~--------------------------~~~~l~~L~~L~l~~N~i~~~~~~~~l~~l~~L~ 143 (198)
T 1ds9_A 91 VADTLEELWISYNQIAS-LS--------------------------GIEKLVNLRVLYMSNNKITNWGEIDKLAALDKLE 143 (198)
T ss_dssp HHHHCSEEEEEEEECCC-HH--------------------------HHHHHHHSSEEEESEEECCCHHHHHHHTTTTTCS
T ss_pred cCCcCCEEECcCCcCCc-CC--------------------------ccccCCCCCEEECCCCcCCchhHHHHHhcCCCCC
Confidence 44555555555555542 33 34444455555555555542111 2445555555
Q ss_pred EEeCCCCcCcccCCc----------cccCCCCCcEEE
Q 045553 259 VLDLSRNFLSGIVPS----------ELGMCKQLKVLV 285 (1082)
Q Consensus 259 ~L~Ls~N~l~~~~p~----------~l~~l~~L~~L~ 285 (1082)
+|++++|.+++..|. .+..+++|+.|+
T Consensus 144 ~L~l~~N~l~~~~~~~~~~~~~~~~~~~~l~~L~~Ld 180 (198)
T 1ds9_A 144 DLLLAGNPLYNDYKENNATSEYRIEVVKRLPNLKKLD 180 (198)
T ss_dssp EEEECSCHHHHHHHTTTTHHHHHHHHHHHCSSCSEEC
T ss_pred EEEecCCccccccccccchHHHHHHHHHhCCCcEEEC
Confidence 555555555444332 245555555554
No 396
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=99.44 E-value=1.7e-12 Score=149.67 Aligned_cols=67 Identities=13% Similarity=0.207 Sum_probs=43.3
Q ss_pred CCCCCCccccCCCCCCeEEccCcccccccCccccCCCCCcEEEcccCcccccCCcccccccccccEEEcc
Q 045553 146 FHGPIPPTLQNCSSLRLINLSGNQFNGTIPAFFGQSPGFQVVSLSFNLLSGSVPEEFGDNCVSLEHILLA 215 (1082)
Q Consensus 146 l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~L~ 215 (1082)
++.+-..+|.++++|+.+.|..+ ++.....+|.++++|+.++|..+ ++ .++...+.++.+|+.+.+.
T Consensus 59 VtsIg~~AF~~c~~L~~i~lp~~-i~~I~~~aF~~c~~L~~i~lp~~-l~-~I~~~aF~~c~~L~~i~~p 125 (394)
T 4fs7_A 59 VVSIGYAAFQGCRKVTEIKIPST-VREIGEFAFENCSKLEIINIPDS-VK-MIGRCTFSGCYALKSILLP 125 (394)
T ss_dssp EEEECTTTTTTCTTEEEEECCTT-CCEECTTTTTTCTTCCEECCCTT-CC-EECTTTTTTCTTCCCCCCC
T ss_pred EeEhHHHHhhCCCCceEEEeCCC-ccCcchhHhhCCCCCcEEEeCCC-ce-Eccchhhcccccchhhccc
Confidence 44344567888888888888644 66555677888888888877654 44 4555555556666655443
No 397
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.44 E-value=1.3e-15 Score=157.67 Aligned_cols=111 Identities=21% Similarity=0.216 Sum_probs=81.5
Q ss_pred cccCCCCCcEEEcccCcccccCCcccccccccccEEEcccCccCCCCCccccCCCCccEEEccCCcCCCCcCccccCCCC
Q 045553 177 FFGQSPGFQVVSLSFNLLSGSVPEEFGDNCVSLEHILLAANSLTGSIPPSLGNCTELRSLLLSSNMLQGDIPSSFGQLVN 256 (1082)
Q Consensus 177 ~~~~l~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~ 256 (1082)
.|..+++|++|+|++|++++ +| .+ ..+++|++|++++|+++ .+|..+..+++|++|++++|++++ +| .+..+++
T Consensus 43 ~~~~l~~L~~L~ls~n~l~~-l~-~~-~~l~~L~~L~l~~n~l~-~l~~~~~~~~~L~~L~L~~N~l~~-l~-~~~~l~~ 116 (198)
T 1ds9_A 43 TLSTLKACKHLALSTNNIEK-IS-SL-SGMENLRILSLGRNLIK-KIENLDAVADTLEELWISYNQIAS-LS-GIEKLVN 116 (198)
T ss_dssp HHHHTTTCSEEECSEEEESC-CC-CH-HHHTTCCEEEEEEEEEC-SCSSHHHHHHHCSEEEEEEEECCC-HH-HHHHHHH
T ss_pred HHhcCCCCCEEECCCCCCcc-cc-cc-ccCCCCCEEECCCCCcc-cccchhhcCCcCCEEECcCCcCCc-CC-ccccCCC
Confidence 45555555555555555552 44 22 24566666666666666 566666677899999999999985 55 6889999
Q ss_pred CCEEeCCCCcCcccCC-ccccCCCCCcEEEeccccCCc
Q 045553 257 LEVLDLSRNFLSGIVP-SELGMCKQLKVLVLRNDYGPL 293 (1082)
Q Consensus 257 L~~L~Ls~N~l~~~~p-~~l~~l~~L~~L~l~~n~~~~ 293 (1082)
|++|++++|++++..+ ..+..+++|++|++++|.+..
T Consensus 117 L~~L~l~~N~i~~~~~~~~l~~l~~L~~L~l~~N~l~~ 154 (198)
T 1ds9_A 117 LRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLYN 154 (198)
T ss_dssp SSEEEESEEECCCHHHHHHHTTTTTCSEEEECSCHHHH
T ss_pred CCEEECCCCcCCchhHHHHHhcCCCCCEEEecCCcccc
Confidence 9999999999985433 578999999999999997643
No 398
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.44 E-value=2.7e-13 Score=136.18 Aligned_cols=104 Identities=24% Similarity=0.300 Sum_probs=67.9
Q ss_pred eEEEccCCcccccCCccccccCCcccEEEccCCcccccCccccCCCCCCCEEEccCCCCCCCCcccccCCCCCCEEEcCC
Q 045553 521 LIFDIGNNKLIGEVPSDMGSHCKCMKFLSMAGNEFVGLIPQSFTNFDSLRNLNLSRNHLQGPLPSYINKMEDLKFLSLSL 600 (1082)
Q Consensus 521 ~~l~l~~n~l~~~ip~~~~~~~~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~ 600 (1082)
+++++++|++. .+|..++ ++|++|+|++|+|+++.|..|.++++|++|+|++|+|+++.+..|..+++|++|+|++
T Consensus 12 ~~l~~s~n~l~-~ip~~~~---~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~ 87 (170)
T 3g39_A 12 TTVDCSGKSLA-SVPTGIP---TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLND 87 (170)
T ss_dssp TEEECTTSCCS-SCCSCCC---TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CEEEeCCCCcC-ccCccCC---CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCC
Confidence 46777777776 5666554 4466677777777666666666666666666666666665555566666666666666
Q ss_pred CcCCccCchhhhcCcccchhhccCcccC
Q 045553 601 NNFTGAIPWELTQLASLEVLELSANSLS 628 (1082)
Q Consensus 601 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 628 (1082)
|+|++..+..|..+++|++|+|++|.++
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~~~ 115 (170)
T 3g39_A 88 NQLKSIPRGAFDNLKSLTHIWLLNNPWD 115 (170)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCBC
T ss_pred CccCEeCHHHhcCCCCCCEEEeCCCCCC
Confidence 6666555555666666666666666655
No 399
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.43 E-value=2.2e-13 Score=137.32 Aligned_cols=104 Identities=22% Similarity=0.281 Sum_probs=77.5
Q ss_pred eEEEccCCcccccCCccccccCCcccEEEccCCcccccCccccCCCCCCCEEEccCCCCCCCCcccccCCCCCCEEEcCC
Q 045553 521 LIFDIGNNKLIGEVPSDMGSHCKCMKFLSMAGNEFVGLIPQSFTNFDSLRNLNLSRNHLQGPLPSYINKMEDLKFLSLSL 600 (1082)
Q Consensus 521 ~~l~l~~n~l~~~ip~~~~~~~~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~ 600 (1082)
..+++++|++. .+|..++ ++|++|+|++|+|+++.|..|.++++|++|+|++|+|+++.+..|..+++|++|+|++
T Consensus 15 ~~l~~~~n~l~-~iP~~~~---~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~ 90 (174)
T 2r9u_A 15 TLVNCQNIRLA-SVPAGIP---TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLND 90 (174)
T ss_dssp SEEECCSSCCS-SCCSCCC---TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred cEEEeCCCCCC-ccCCCcC---CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCC
Confidence 57888888875 7787665 5577888888888877777777788888888888887766666667777777777777
Q ss_pred CcCCccCchhhhcCcccchhhccCcccC
Q 045553 601 NNFTGAIPWELTQLASLEVLELSANSLS 628 (1082)
Q Consensus 601 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 628 (1082)
|+|++..+..|..+++|++|+|++|.+.
T Consensus 91 N~l~~l~~~~~~~l~~L~~L~L~~N~~~ 118 (174)
T 2r9u_A 91 NHLKSIPRGAFDNLKSLTHIYLYNNPWD 118 (174)
T ss_dssp SCCCCCCTTTTTTCTTCSEEECCSSCBC
T ss_pred CccceeCHHHhccccCCCEEEeCCCCcc
Confidence 7777555555777777777777777776
No 400
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=99.28 E-value=2.4e-10 Score=131.57 Aligned_cols=90 Identities=13% Similarity=0.238 Sum_probs=48.4
Q ss_pred cCCccccccCCcccEEEccCCcccccCccccCCCCCCCEEEccCCCCCCCCcccccCCCCCCEEEcCCCcCCccCchhhh
Q 045553 533 EVPSDMGSHCKCMKFLSMAGNEFVGLIPQSFTNFDSLRNLNLSRNHLQGPLPSYINKMEDLKFLSLSLNNFTGAIPWELT 612 (1082)
Q Consensus 533 ~ip~~~~~~~~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~ 612 (1082)
.|++..|..+.+|+.+++..+ ++.+...+|.++.+|+.+.|..+ ++.+...+|.++.+|+.+++.+|.... ..|.
T Consensus 301 ~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~C~~L~~i~ip~s-v~~I~~~aF~~C~~L~~i~~~~~~~~~---~~~~ 375 (394)
T 4gt6_A 301 ELPESVFAGCISLKSIDIPEG-ITQILDDAFAGCEQLERIAIPSS-VTKIPESAFSNCTALNNIEYSGSRSQW---NAIS 375 (394)
T ss_dssp EECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEECTT-CCBCCGGGGTTCTTCCEEEESSCHHHH---HTCB
T ss_pred ccCceeecCCCCcCEEEeCCc-ccEehHhHhhCCCCCCEEEECcc-cCEEhHhHhhCCCCCCEEEECCceeeh---hhhh
Confidence 455566666666677666643 55555666777777777777544 454555666666777777666654331 3445
Q ss_pred cCcccchhhccCccc
Q 045553 613 QLASLEVLELSANSL 627 (1082)
Q Consensus 613 ~l~~L~~L~Ls~N~l 627 (1082)
.+.+|+.+.+..|.+
T Consensus 376 ~~~~L~~i~i~~~~~ 390 (394)
T 4gt6_A 376 TDSGLQNLPVAPGSI 390 (394)
T ss_dssp CCCCC----------
T ss_pred ccCCCCEEEeCCCCE
Confidence 555566665555543
No 401
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.25 E-value=7.5e-12 Score=141.67 Aligned_cols=91 Identities=23% Similarity=0.153 Sum_probs=42.7
Q ss_pred ccCCCCCCEEEcCC-CcCCccCchhhhcCcccchhhccCcccCCCCCccccCCcccceecccCcccCCCCCCCCCCCCcc
Q 045553 587 INKMEDLKFLSLSL-NNFTGAIPWELTQLASLEVLELSANSLSGEIPSEFSKLEHLNVLRLDHNNLTGRIPPGFGTRSSL 665 (1082)
Q Consensus 587 ~~~l~~L~~L~Ls~-N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L 665 (1082)
|..+++|+.|+|++ |+|++..|..|.+|++|+.|+|++|+|++..|..|.+|++|+.|+|++|+|++.++..|..+. |
T Consensus 27 l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~-L 105 (347)
T 2ifg_A 27 LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSFNALESLSWKTVQGLS-L 105 (347)
T ss_dssp SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCSSCCSCCCSTTTCSCC-C
T ss_pred CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCCCCccceeCHHHcccCC-c
Confidence 44444444444443 444444444444444444444444444444444444455555555555555543333333333 5
Q ss_pred cEEeccCCccccC
Q 045553 666 SIFDVSFNNLSGS 678 (1082)
Q Consensus 666 ~~l~ls~N~l~~~ 678 (1082)
+.|+|++|+|.+.
T Consensus 106 ~~l~l~~N~~~c~ 118 (347)
T 2ifg_A 106 QELVLSGNPLHCS 118 (347)
T ss_dssp CEEECCSSCCCCC
T ss_pred eEEEeeCCCccCC
Confidence 5555555555443
No 402
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=99.23 E-value=2.8e-10 Score=131.00 Aligned_cols=113 Identities=13% Similarity=0.191 Sum_probs=60.8
Q ss_pred cCCccccccCCcccEEEccCCcccccCccccCCCCCCCEEEccCCCCCCCCcccccCCCCCCEEEcCCCcCCccCchhhh
Q 045553 533 EVPSDMGSHCKCMKFLSMAGNEFVGLIPQSFTNFDSLRNLNLSRNHLQGPLPSYINKMEDLKFLSLSLNNFTGAIPWELT 612 (1082)
Q Consensus 533 ~ip~~~~~~~~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~ 612 (1082)
.|....|..+++|+.+.+. +.++.+...+|.++.+|+.++|.++ ++.+...+|.++.+|+.+.+..+ ++.+-..+|.
T Consensus 278 ~I~~~aF~~c~~L~~i~l~-~~i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~C~~L~~i~ip~s-v~~I~~~aF~ 354 (394)
T 4gt6_A 278 SIGTGAFMNCPALQDIEFS-SRITELPESVFAGCISLKSIDIPEG-ITQILDDAFAGCEQLERIAIPSS-VTKIPESAFS 354 (394)
T ss_dssp EECTTTTTTCTTCCEEECC-TTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEECTT-CCBCCGGGGT
T ss_pred eecCcccccccccccccCC-CcccccCceeecCCCCcCEEEeCCc-ccEehHhHhhCCCCCCEEEECcc-cCEEhHhHhh
Confidence 3444555555666666664 4455566666777777777777654 44455566666666776666543 5545555666
Q ss_pred cCcccchhhccCcccCCCCCccccCCcccceecccCccc
Q 045553 613 QLASLEVLELSANSLSGEIPSEFSKLEHLNVLRLDHNNL 651 (1082)
Q Consensus 613 ~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l 651 (1082)
+|.+|+.+++.+|.... ..|....+|+.+.+..|.+
T Consensus 355 ~C~~L~~i~~~~~~~~~---~~~~~~~~L~~i~i~~~~~ 390 (394)
T 4gt6_A 355 NCTALNNIEYSGSRSQW---NAISTDSGLQNLPVAPGSI 390 (394)
T ss_dssp TCTTCCEEEESSCHHHH---HTCBCCCCC----------
T ss_pred CCCCCCEEEECCceeeh---hhhhccCCCCEEEeCCCCE
Confidence 66666666666655431 3444555566555554443
No 403
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.21 E-value=2.6e-13 Score=154.27 Aligned_cols=87 Identities=18% Similarity=0.121 Sum_probs=40.2
Q ss_pred CCCcEEEcccCcccccCCcccccccccccEEEcccCccCCCCCccc-----cCCCCccEEEccCCcCCCC----cCcccc
Q 045553 182 PGFQVVSLSFNLLSGSVPEEFGDNCVSLEHILLAANSLTGSIPPSL-----GNCTELRSLLLSSNMLQGD----IPSSFG 252 (1082)
Q Consensus 182 ~~L~~L~L~~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~~~~~-----~~l~~L~~L~L~~N~l~~~----~p~~~~ 252 (1082)
++|++|+|++|.++......+...+++|++|+|++|+|+......+ ...++|++|+|++|.|+.. ++..+.
T Consensus 101 ~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~ 180 (372)
T 3un9_A 101 HALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLLLHDQCQITTLRLSNNPLTAAGVAVLMEGLA 180 (372)
T ss_dssp SCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHHHSTTCCCCEEECCSSCCHHHHHHHHHHHHH
T ss_pred CCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHHHhcCCccceeeCCCCCCChHHHHHHHHHHh
Confidence 3455555555544432222333333445555555555543322222 1234556666666655421 233334
Q ss_pred CCCCCCEEeCCCCcCc
Q 045553 253 QLVNLEVLDLSRNFLS 268 (1082)
Q Consensus 253 ~l~~L~~L~Ls~N~l~ 268 (1082)
.+++|++|+|++|.|+
T Consensus 181 ~~~~L~~L~Ls~N~l~ 196 (372)
T 3un9_A 181 GNTSVTHLSLLHTGLG 196 (372)
T ss_dssp TCSSCCEEECTTSSCH
T ss_pred cCCCcCEEeCCCCCCC
Confidence 5555666666666554
No 404
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.18 E-value=3.9e-13 Score=152.76 Aligned_cols=170 Identities=19% Similarity=0.088 Sum_probs=124.1
Q ss_pred CCCCCEEEcccCCCcccCChhhcCC-----CCCCEEeCcCCCCCCCCCccc-cCCCCCCeEEccCcccccccCccc----
Q 045553 109 LTQLRVLLLAFNGFSGELPLEIGQL-----SLLEILDLSFNSFHGPIPPTL-QNCSSLRLINLSGNQFNGTIPAFF---- 178 (1082)
Q Consensus 109 l~~L~~L~L~~n~l~~~~p~~~~~l-----~~L~~L~Ls~n~l~~~~p~~l-~~l~~L~~L~Ls~N~l~~~~p~~~---- 178 (1082)
+++|++|+|++|.++......+... ++|++|+|++|.++......+ ..+++|++|+|++|+++......+
T Consensus 71 ~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L 150 (372)
T 3un9_A 71 LSSLRQLNLAGVRMTPVKCTVVAAVLGSGRHALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLL 150 (372)
T ss_dssp HTTCCEEECTTSCCCHHHHHHHHHHHSSCSSCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHH
T ss_pred HhhCCEEEecCCCCCHHHHHHHHHHHhhCCCCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHH
Confidence 3679999999999985444444333 799999999999875433333 346789999999999986544444
Q ss_pred -cCCCCCcEEEcccCcccccCCcccc---cccccccEEEcccCccCCCC----CccccCCCCccEEEccCCcCCCC----
Q 045553 179 -GQSPGFQVVSLSFNLLSGSVPEEFG---DNCVSLEHILLAANSLTGSI----PPSLGNCTELRSLLLSSNMLQGD---- 246 (1082)
Q Consensus 179 -~~l~~L~~L~L~~N~l~~~~p~~~~---~~l~~L~~L~L~~N~l~~~~----~~~~~~l~~L~~L~L~~N~l~~~---- 246 (1082)
...++|++|+|++|.|+......+. ..+++|++|+|++|.|++.. +..+...++|++|+|++|.|+..
T Consensus 151 ~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~L~~L~Ls~N~i~~~g~~~ 230 (372)
T 3un9_A 151 LHDQCQITTLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQELNVAYNGAGDTAALA 230 (372)
T ss_dssp HSTTCCCCEEECCSSCCHHHHHHHHHHHHHTCSSCCEEECTTSSCHHHHHHHHHHHGGGCSCCCEEECCSSCCCHHHHHH
T ss_pred HhcCCccceeeCCCCCCChHHHHHHHHHHhcCCCcCEEeCCCCCCCcHHHHHHHHHHhcCCCcCeEECCCCCCCHHHHHH
Confidence 3568899999999998742222221 24678999999999988533 45567778999999999999853
Q ss_pred cCccccCCCCCCEEeCCCCcCcccCCccccCC
Q 045553 247 IPSSFGQLVNLEVLDLSRNFLSGIVPSELGMC 278 (1082)
Q Consensus 247 ~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l 278 (1082)
++..+...++|++|+|++|.|++.....+..+
T Consensus 231 l~~~L~~~~~L~~L~Ls~N~i~~~g~~~L~~~ 262 (372)
T 3un9_A 231 LARAAREHPSLELLHLYFNELSSEGRQVLRDL 262 (372)
T ss_dssp HHHHHHHCSSCCEEECTTSSCCHHHHHHHHHC
T ss_pred HHHHHHhCCCCCEEeccCCCCCHHHHHHHHHH
Confidence 34455567899999999999986655555443
No 405
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.17 E-value=3.3e-11 Score=136.39 Aligned_cols=104 Identities=20% Similarity=0.183 Sum_probs=75.8
Q ss_pred eEEEccCC-cccccCCccccccCCcccEEEccC-CcccccCccccCCCCCCCEEEccCCCCCCCCcccccCCCCCCEEEc
Q 045553 521 LIFDIGNN-KLIGEVPSDMGSHCKCMKFLSMAG-NEFVGLIPQSFTNFDSLRNLNLSRNHLQGPLPSYINKMEDLKFLSL 598 (1082)
Q Consensus 521 ~~l~l~~n-~l~~~ip~~~~~~~~~L~~L~L~~-N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 598 (1082)
..++++++ ++. .||. +..+++|++|+|++ |+|+++.+..|.++++|++|+|++|+|+++.|..|.++++|++|+|
T Consensus 11 ~~v~~~~~n~l~-~ip~--l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l 87 (347)
T 2ifg_A 11 SGLRCTRDGALD-SLHH--LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNL 87 (347)
T ss_dssp SCEECCSSCCCT-TTTT--SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEEC
T ss_pred CEEEcCCCCCCC-ccCC--CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeC
Confidence 35688887 676 5777 44556677788875 7777777777777777777777777777777777777777777777
Q ss_pred CCCcCCccCchhhhcCcccchhhccCcccC
Q 045553 599 SLNNFTGAIPWELTQLASLEVLELSANSLS 628 (1082)
Q Consensus 599 s~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 628 (1082)
++|+|++..+..|..++ |+.|+|++|.+.
T Consensus 88 ~~N~l~~~~~~~~~~~~-L~~l~l~~N~~~ 116 (347)
T 2ifg_A 88 SFNALESLSWKTVQGLS-LQELVLSGNPLH 116 (347)
T ss_dssp CSSCCSCCCSTTTCSCC-CCEEECCSSCCC
T ss_pred CCCccceeCHHHcccCC-ceEEEeeCCCcc
Confidence 77777765555565554 777777777776
No 406
>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*
Probab=99.14 E-value=1.2e-10 Score=126.19 Aligned_cols=148 Identities=12% Similarity=0.018 Sum_probs=115.4
Q ss_pred HHHHhcCccccceecccCceEEEEEEEcCCeEEEEEEeecCccccHHHHHHHHHHHhccC-CCceeeEeeeeccCCeEEE
Q 045553 796 VVRATAGFNVQNCIGSGGFGATYKAEIIPGVVVAVKRLSVGRFQGVQQFAAEIRTLGRVQ-HPNLVTLIGYHVSEAEMFL 874 (1082)
Q Consensus 796 ~~~~~~~~~~~~~lg~G~~g~Vy~a~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~~~l 874 (1082)
+.....+|++...++.|+.+.||++... +..+++|+...........+.+|+++++.+. +..+.++++++...+..|+
T Consensus 9 l~~~l~~~~~~~~~~g~s~~~v~~~~~~-~~~~vlK~~~~~~~~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~l 87 (263)
T 3tm0_A 9 LKKLIEKYRCVKDTEGMSPAKVYKLVGE-NENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNL 87 (263)
T ss_dssp HHHHHTTSEEEECCSCCSSSEEEEEECS-SCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEE
T ss_pred HHHHhccceeEeeccCCCCCeEEEEECC-CCcEEEEeCCcccCCCHHHHHHHHHHHHHHhcCCCCCeEEEEEecCCceEE
Confidence 3445567988888999999999999754 7899999986532222345888999998884 6678889999988889999
Q ss_pred EEeecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCC-----------------------------------
Q 045553 875 IYNYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDEC----------------------------------- 919 (1082)
Q Consensus 875 V~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~----------------------------------- 919 (1082)
||||++|.++.+.+.. ......++.+++++++.||+..
T Consensus 88 v~e~i~G~~l~~~~~~-------~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (263)
T 3tm0_A 88 LMSEADGVLCSEEYED-------EQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWEE 160 (263)
T ss_dssp EEECCSSEEHHHHCCT-------TTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCSGGGGST
T ss_pred EEEecCCeehhhccCC-------cccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhccccccccccccc
Confidence 9999999999876321 1223468889999999999810
Q ss_pred ---------------------CCCeEeccCCCCCEEEcCCCcEEEeeccccee
Q 045553 920 ---------------------VPRVLHRDIKPSNILLDNNLNAYLSDFGLARL 951 (1082)
Q Consensus 920 ---------------------~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~ 951 (1082)
.+.++|||++|.||+++++..+.|+||+.+..
T Consensus 161 ~~~~~~~~~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~lIDwe~a~~ 213 (263)
T 3tm0_A 161 DTPFKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSGR 213 (263)
T ss_dssp TCSSSSHHHHHHHHHHCCCCCCEEEECSSCCTTSEEEETTEEEEECCCTTCEE
T ss_pred cccCCCHHHHHHHHHhcCCCCCceEECCCCCcCcEEEECCcEEEEEEchhccc
Confidence 13689999999999998766667999998753
No 407
>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6
Probab=99.00 E-value=3.1e-10 Score=122.62 Aligned_cols=140 Identities=17% Similarity=0.153 Sum_probs=104.1
Q ss_pred HhcCccccceecccCceEEEEEEEcCCeEEEEEEeecCccccHHHHHHHHHHHhccCCCc--eeeEeeeeccCCeEEEEE
Q 045553 799 ATAGFNVQNCIGSGGFGATYKAEIIPGVVVAVKRLSVGRFQGVQQFAAEIRTLGRVQHPN--LVTLIGYHVSEAEMFLIY 876 (1082)
Q Consensus 799 ~~~~~~~~~~lg~G~~g~Vy~a~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~n--iv~l~~~~~~~~~~~lV~ 876 (1082)
...++.+....+.|..+.||++...+|..+++|..... ....+.+|+++++.+.+.+ +.+++++....+..++||
T Consensus 18 ~~~~~~~~~~~~gg~~~~v~~~~~~~g~~~vlK~~~~~---~~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~~~~~v~ 94 (264)
T 1nd4_A 18 RLFGYDWAQQTIGCSDAAVFRLSAQGRPVLFVKTDLSG---ALNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLL 94 (264)
T ss_dssp TTTTCEEEECSCTTSSCEEEEEECTTSCCEEEEEECSC---TTSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEE
T ss_pred hcCCCceEecccCCCCceEEEEecCCCCeEEEEeCCcc---cchhhhHHHHHHHHHHhCCCCCCeEEEeccCCCCCEEEE
Confidence 34456665444566679999998777888999997643 2245778999988886544 556888888888899999
Q ss_pred eecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCC-------------------------------------
Q 045553 877 NYLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDEC------------------------------------- 919 (1082)
Q Consensus 877 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~------------------------------------- 919 (1082)
||++|.++. ... .+ ...++.++++.++.||+..
T Consensus 95 e~i~G~~l~--~~~-----~~---~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (264)
T 1nd4_A 95 GEVPGQDLL--SSH-----LA---PAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQG 164 (264)
T ss_dssp ECCSSEETT--TSC-----CC---HHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGTT
T ss_pred EecCCcccC--cCc-----CC---HhHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCccchhhhhhccC
Confidence 999998884 211 11 2357788888888888752
Q ss_pred ------------------CCCeEeccCCCCCEEEcCCCcEEEeeccccee
Q 045553 920 ------------------VPRVLHRDIKPSNILLDNNLNAYLSDFGLARL 951 (1082)
Q Consensus 920 ------------------~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~ 951 (1082)
.+.++|||++|.||+++++..+.|+|||.+..
T Consensus 165 ~~~~~~~~~l~~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~liD~~~a~~ 214 (264)
T 1nd4_A 165 LAPAELFARLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLGV 214 (264)
T ss_dssp CCHHHHHHHHHHTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCEE
T ss_pred ccHHHHHHHHHHhcCCCCCeEEECCCCCCCcEEEECCcEEEEEcchhccc
Confidence 12399999999999998876677999998754
No 408
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=98.95 E-value=5.8e-08 Score=111.01 Aligned_cols=81 Identities=17% Similarity=0.168 Sum_probs=52.3
Q ss_pred cCCccccccCCcccEEEccCCcccccCccccCCCCCCCEEEccCCCCCCCCcccccCCCCCCEEEcCCCcCCccCchhhh
Q 045553 533 EVPSDMGSHCKCMKFLSMAGNEFVGLIPQSFTNFDSLRNLNLSRNHLQGPLPSYINKMEDLKFLSLSLNNFTGAIPWELT 612 (1082)
Q Consensus 533 ~ip~~~~~~~~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~ 612 (1082)
.++...|..+++|+.+.+.++.++.+...+|.++.+|+.++|.++ ++.+...+|.++.+|+.+.+..+ ++.+-..+|.
T Consensus 276 ~i~~~aF~~c~~L~~i~l~~~~i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~ip~~-v~~I~~~aF~ 353 (379)
T 4h09_A 276 TVPYLLCSGCSNLTKVVMDNSAIETLEPRVFMDCVKLSSVTLPTA-LKTIQVYAFKNCKALSTISYPKS-ITLIESGAFE 353 (379)
T ss_dssp EECTTTTTTCTTCCEEEECCTTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCCCCCCTT-CCEECTTTTT
T ss_pred eccccccccccccccccccccccceehhhhhcCCCCCCEEEcCcc-ccEEHHHHhhCCCCCCEEEECCc-cCEEchhHhh
Confidence 455556666667777777777777666777777777777777654 55455566777777777766544 5544555565
Q ss_pred cCc
Q 045553 613 QLA 615 (1082)
Q Consensus 613 ~l~ 615 (1082)
++.
T Consensus 354 ~c~ 356 (379)
T 4h09_A 354 GSS 356 (379)
T ss_dssp TSS
T ss_pred CCC
Confidence 553
No 409
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=98.88 E-value=1.2e-07 Score=108.20 Aligned_cols=104 Identities=10% Similarity=0.128 Sum_probs=74.6
Q ss_pred cCCccccccCCcccEEEccCCcccccCccccCCCCCCCEEEccCCCCCCCCcccccCCCCCCEEEcCCCcCCccCchhhh
Q 045553 533 EVPSDMGSHCKCMKFLSMAGNEFVGLIPQSFTNFDSLRNLNLSRNHLQGPLPSYINKMEDLKFLSLSLNNFTGAIPWELT 612 (1082)
Q Consensus 533 ~ip~~~~~~~~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~ 612 (1082)
.|+...|..+.+|+.+.+..+ ++.+...+|.++++|+.+.+.++.++.+...+|.++.+|+.+.|..+ ++.+-..+|.
T Consensus 253 ~I~~~aF~~~~~l~~i~l~~~-i~~i~~~aF~~c~~L~~i~l~~~~i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~ 330 (379)
T 4h09_A 253 SIGSFLLQNCTALKTLNFYAK-VKTVPYLLCSGCSNLTKVVMDNSAIETLEPRVFMDCVKLSSVTLPTA-LKTIQVYAFK 330 (379)
T ss_dssp EECTTTTTTCTTCCEEEECCC-CSEECTTTTTTCTTCCEEEECCTTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTT
T ss_pred EeCccccceeehhcccccccc-ceeccccccccccccccccccccccceehhhhhcCCCCCCEEEcCcc-ccEEHHHHhh
Confidence 455566666677777777643 66666778888888888888888887666778888888888888654 6656667788
Q ss_pred cCcccchhhccCcccCCCCCccccCCc
Q 045553 613 QLASLEVLELSANSLSGEIPSEFSKLE 639 (1082)
Q Consensus 613 ~l~~L~~L~Ls~N~l~~~~p~~~~~l~ 639 (1082)
++.+|+.+.+..+ ++.+-..+|.++.
T Consensus 331 ~C~~L~~i~ip~~-v~~I~~~aF~~c~ 356 (379)
T 4h09_A 331 NCKALSTISYPKS-ITLIESGAFEGSS 356 (379)
T ss_dssp TCTTCCCCCCCTT-CCEECTTTTTTSS
T ss_pred CCCCCCEEEECCc-cCEEchhHhhCCC
Confidence 8888888877654 5534455666553
No 410
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.84 E-value=5.9e-10 Score=125.40 Aligned_cols=184 Identities=12% Similarity=0.134 Sum_probs=126.1
Q ss_pred ccccccCCCCCCEEEcccCCCc---------ccCChhhcCCCCCCEEeCcCCCCCCCCCccccCCCCCCeEEccCccccc
Q 045553 102 LSRAIGDLTQLRVLLLAFNGFS---------GELPLEIGQLSLLEILDLSFNSFHGPIPPTLQNCSSLRLINLSGNQFNG 172 (1082)
Q Consensus 102 l~~~l~~l~~L~~L~L~~n~l~---------~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~ 172 (1082)
+.+++..+++|+.|.+...... +.+...+..+++|+.|+|++|.-. .++. +. +++|++|+|..|.+..
T Consensus 131 L~~s~~~l~~L~~L~l~~~~~e~~~is~~~~~~L~~ll~~~P~L~~L~L~g~~~l-~l~~-~~-~~~L~~L~L~~~~l~~ 207 (362)
T 2ra8_A 131 IVENKEKFAHFEGLFWGDIDFEEQEISWIEQVDLSPVLDAMPLLNNLKIKGTNNL-SIGK-KP-RPNLKSLEIISGGLPD 207 (362)
T ss_dssp HHTTHHHHTTCSEEEECCCCTTTCCGGGCBCCBCHHHHHTCTTCCEEEEECCBTC-BCCS-CB-CTTCSEEEEECSBCCH
T ss_pred HHHhhhhcchhhheeecCcchhhcccccccccCHHHHHhcCCCCcEEEEeCCCCc-eecc-cc-CCCCcEEEEecCCCCh
Confidence 4556778889999999765331 235566788899999999988311 2343 43 8899999999998875
Q ss_pred ccCcccc--CCCCCcEEEccc--Cccccc-----CCcccc-cccccccEEEcccCccCCCCCcccc---CCCCccEEEcc
Q 045553 173 TIPAFFG--QSPGFQVVSLSF--NLLSGS-----VPEEFG-DNCVSLEHILLAANSLTGSIPPSLG---NCTELRSLLLS 239 (1082)
Q Consensus 173 ~~p~~~~--~l~~L~~L~L~~--N~l~~~-----~p~~~~-~~l~~L~~L~L~~N~l~~~~~~~~~---~l~~L~~L~L~ 239 (1082)
.....+. .+|+|+.|+|+. |...+. +...+. ..+++|++|+|.+|.+.+..+..+. .+++|++|+|+
T Consensus 208 ~~l~~l~~~~lp~L~~L~L~~~~~~~~~~~~~~~l~~~l~~~~~p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs 287 (362)
T 2ra8_A 208 SVVEDILGSDLPNLEKLVLYVGVEDYGFDGDMNVFRPLFSKDRFPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDIS 287 (362)
T ss_dssp HHHHHHHHSBCTTCCEEEEECBCGGGTCCSCGGGTGGGSCTTTCTTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECC
T ss_pred HHHHHHHHccCCCCcEEEEeccccccccchhHHHHHHHHhcCCCCCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECC
Confidence 5444554 789999999864 222111 111121 2478999999999998754443333 57899999999
Q ss_pred CCcCCCCc----CccccCCCCCCEEeCCCCcCcccCCccccC-CCCCcEEEecccc
Q 045553 240 SNMLQGDI----PSSFGQLVNLEVLDLSRNFLSGIVPSELGM-CKQLKVLVLRNDY 290 (1082)
Q Consensus 240 ~N~l~~~~----p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~-l~~L~~L~l~~n~ 290 (1082)
.|.+++.. +..+..+++|+.|+|++|.|+...-..+.. + ...++++++.
T Consensus 288 ~n~L~d~G~~~L~~~L~~l~~L~~L~L~~n~i~d~~~~~l~~al--g~~~~~~~~~ 341 (362)
T 2ra8_A 288 AGVLTDEGARLLLDHVDKIKHLKFINMKYNYLSDEMKKELQKSL--PMKIDVSDSQ 341 (362)
T ss_dssp SSCCBHHHHHHHHTTHHHHTTCSEEECCSBBCCHHHHHHHHHHC--CSEEECCSBC
T ss_pred CCCCChHHHHHHHhhcccCCcceEEECCCCcCCHHHHHHHHHHc--CCEEEecCCc
Confidence 99998543 334456789999999999987554444443 2 3567777653
No 411
>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}
Probab=98.79 E-value=1e-08 Score=116.32 Aligned_cols=141 Identities=15% Similarity=0.207 Sum_probs=106.2
Q ss_pred cceecccCceEEEEEEEcCCeEEEEEEee--cCc-cccHHHHHHHHHHHhccCC--CceeeEeeeeccC---CeEEEEEe
Q 045553 806 QNCIGSGGFGATYKAEIIPGVVVAVKRLS--VGR-FQGVQQFAAEIRTLGRVQH--PNLVTLIGYHVSE---AEMFLIYN 877 (1082)
Q Consensus 806 ~~~lg~G~~g~Vy~a~~~~~~~vavK~~~--~~~-~~~~~~~~~e~~~l~~l~h--~niv~l~~~~~~~---~~~~lV~E 877 (1082)
.+.++.|.++.||+.+.. +..+++|+.. ... ......+.+|+++++.+.+ ..++++++++.+. +..++|||
T Consensus 43 ~~~l~~G~sn~~y~v~~~-~~~~vlr~~~~p~~~~~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~~~vme 121 (359)
T 3dxp_A 43 VEQFKGGQSNPTFKLVTP-GQTYVMRAKPGPKSKLLPSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRAFYIME 121 (359)
T ss_dssp EEECCC-CCSCEEEEECS-SCEEEEECCCC----------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSCEEEEE
T ss_pred EEEcCCcccceEEEEEEC-CceEEEEeCCCCCCCCCCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCeEEEEE
Confidence 467899999999999765 4678888775 332 1234567889999998874 4578888888766 45899999
Q ss_pred ecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCC--------------------------------------
Q 045553 878 YLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDEC-------------------------------------- 919 (1082)
Q Consensus 878 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~-------------------------------------- 919 (1082)
|++|..+.+.. ...++...+..++.++++.|+.||+..
T Consensus 122 ~v~G~~l~~~~----~~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (359)
T 3dxp_A 122 FVSGRVLWDQS----LPGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSETESIPAM 197 (359)
T ss_dssp CCCCBCCCCTT----CTTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCCSCCHHH
T ss_pred ecCCeecCCCc----cccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHhcCCcCChHH
Confidence 99988774421 224678888899999999999999731
Q ss_pred -----------------CCCeEeccCCCCCEEEcCCCc--EEEeeccccee
Q 045553 920 -----------------VPRVLHRDIKPSNILLDNNLN--AYLSDFGLARL 951 (1082)
Q Consensus 920 -----------------~~~ivH~Dlk~~Nill~~~~~--~kl~DfGla~~ 951 (1082)
.+.++|||+++.||+++.++. +.|+||+.+..
T Consensus 198 ~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~ 248 (359)
T 3dxp_A 198 DSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTL 248 (359)
T ss_dssp HHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTCEE
T ss_pred HHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECcccccc
Confidence 247999999999999997753 68999999875
No 412
>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A
Probab=98.78 E-value=5.7e-09 Score=115.40 Aligned_cols=186 Identities=18% Similarity=0.212 Sum_probs=123.0
Q ss_pred cceecccCceEEEEEEEcCCeEEEEEEeecCccccHHHHHHHHHHHhccC-CCc--eeeEeeeeccCC---eEEEEEeec
Q 045553 806 QNCIGSGGFGATYKAEIIPGVVVAVKRLSVGRFQGVQQFAAEIRTLGRVQ-HPN--LVTLIGYHVSEA---EMFLIYNYL 879 (1082)
Q Consensus 806 ~~~lg~G~~g~Vy~a~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h~n--iv~l~~~~~~~~---~~~lV~E~~ 879 (1082)
.+.++.|....||++. ..+++|+.... .....+.+|+++++.+. +.. +.+++.+..... ..|+|||++
T Consensus 25 i~~~~~G~~n~v~~v~----~~~vlR~~~~~--~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~vm~~i 98 (304)
T 3sg8_A 25 IEISGEGNDCIAYEIN----RDFIFKFPKHS--RGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAGFTKI 98 (304)
T ss_dssp CCEEEECSSEEEEEST----TSEEEEEESSH--HHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSCEEEECC
T ss_pred eEecCCCCcceEEEEC----CEEEEEecCCc--chHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcceEEEccc
Confidence 3568999999999863 56888885432 33567889999998874 322 445555544333 348899999
Q ss_pred CCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhC-----------------------------------------
Q 045553 880 PGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDE----------------------------------------- 918 (1082)
Q Consensus 880 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~----------------------------------------- 918 (1082)
+|.++.+.... .++.+++..++.++++.++.||+.
T Consensus 99 ~G~~l~~~~~~----~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 174 (304)
T 3sg8_A 99 KGVPLTPLLLN----NLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKGPQMKKVD 174 (304)
T ss_dssp CCEECCHHHHH----TSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCHHHHHHHH
T ss_pred CCeECCccccc----cCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCcccHHHHH
Confidence 99888754332 367778888888999988888861
Q ss_pred --------------CCCCeEeccCCCCCEEEcC--CCcEEEeecccceecCCCCCccccC-------------cccCCCc
Q 045553 919 --------------CVPRVLHRDIKPSNILLDN--NLNAYLSDFGLARLLGTSETHATTD-------------VAGTFGY 969 (1082)
Q Consensus 919 --------------~~~~ivH~Dlk~~Nill~~--~~~~kl~DfGla~~~~~~~~~~~~~-------------~~gt~~y 969 (1082)
..+.++|||++|.||++++ ...+.|+||+.+..-.....-.... +...+++
T Consensus 175 ~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~l~~Y~~ 254 (304)
T 3sg8_A 175 DFYRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAISDPDNDFISLMEDDEEYGMEFVSKILNHYKH 254 (304)
T ss_dssp HHHHHHHTCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECCCTTCEEECTTHHHHTTCCTTTSCCHHHHHHHHHHHTC
T ss_pred HHHHHHHhccccccCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCCccCChHHHHHHHHhhccccCHHHHHHHHHHcCC
Confidence 1246899999999999998 4568899999987642211100000 0000011
Q ss_pred cc-chhcccCCCCchhhHHHHHHHHHHHHhCCCCC
Q 045553 970 VA-PEYAMTCRVSDKADVYSFGVVLLELISDKKAL 1003 (1082)
Q Consensus 970 ~a-PE~~~~~~~~~~~Dv~slGvll~elltg~~p~ 1003 (1082)
.. |+.... .....+.|++|.++|++.+|..+|
T Consensus 255 ~~~~~~~~r--~~~~~~~~~l~~~~~~~~~g~~~~ 287 (304)
T 3sg8_A 255 KDIPTVLEK--YRMKEKYWSFEKIIYGKEYGYMDW 287 (304)
T ss_dssp SCHHHHHHH--HHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred CCcHHHHHH--HHHHHHHHHHHHHHHHHHcCCHHH
Confidence 11 222111 112368999999999999998765
No 413
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.69 E-value=3.6e-10 Score=120.43 Aligned_cols=68 Identities=22% Similarity=0.255 Sum_probs=35.0
Q ss_pred cCCCCCCEEeCcCCCCCC--CCCccccCCCCCCeEEccCccccccc-CccccCCCCCcEEEcccCcccccCC
Q 045553 131 GQLSLLEILDLSFNSFHG--PIPPTLQNCSSLRLINLSGNQFNGTI-PAFFGQSPGFQVVSLSFNLLSGSVP 199 (1082)
Q Consensus 131 ~~l~~L~~L~Ls~n~l~~--~~p~~l~~l~~L~~L~Ls~N~l~~~~-p~~~~~l~~L~~L~L~~N~l~~~~p 199 (1082)
.++++|+.|+|++|+|++ .+|..+..+++|++|+|++|+|++.- ...+..+ +|++|+|++|.+.+.+|
T Consensus 167 ~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~~~l~~l~~l-~L~~L~L~~Npl~~~~~ 237 (267)
T 3rw6_A 167 ENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSERELDKIKGL-KLEELWLDGNSLCDTFR 237 (267)
T ss_dssp HHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSGGGGGGGTTS-CCSEEECTTSTTGGGCS
T ss_pred hhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCchhhhhcccC-CcceEEccCCcCccccC
Confidence 445566666666666664 23344555666666666666665431 1122222 55555555555554443
No 414
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.67 E-value=9e-09 Score=115.73 Aligned_cols=179 Identities=19% Similarity=0.244 Sum_probs=123.6
Q ss_pred CCCCEEEcccCCCcc-c-------CChhhcCCCCCCEEeCcCCCCC---------CCCCccccCCCCCCeEEccCccccc
Q 045553 110 TQLRVLLLAFNGFSG-E-------LPLEIGQLSLLEILDLSFNSFH---------GPIPPTLQNCSSLRLINLSGNQFNG 172 (1082)
Q Consensus 110 ~~L~~L~L~~n~l~~-~-------~p~~~~~l~~L~~L~Ls~n~l~---------~~~p~~l~~l~~L~~L~Ls~N~l~~ 172 (1082)
..++.|.+......+ . +..++..+++|+.|.+..+... +.+...+..+++|+.|+|++|.-.
T Consensus 107 ~~v~~L~lg~~~~~~~~~~~~~~~L~~s~~~l~~L~~L~l~~~~~e~~~is~~~~~~L~~ll~~~P~L~~L~L~g~~~l- 185 (362)
T 2ra8_A 107 PSLKQITIGXWGYEGEDCSDIADGIVENKEKFAHFEGLFWGDIDFEEQEISWIEQVDLSPVLDAMPLLNNLKIKGTNNL- 185 (362)
T ss_dssp GGCSEEEECCCCSSSCCSHHHHHHHHTTHHHHTTCSEEEECCCCTTTCCGGGCBCCBCHHHHHTCTTCCEEEEECCBTC-
T ss_pred hhcceEEEcccccCCCcHHHHHHHHHHhhhhcchhhheeecCcchhhcccccccccCHHHHHhcCCCCcEEEEeCCCCc-
Confidence 456788887665542 2 2334667899999999765432 235566688899999999998422
Q ss_pred ccCccccCCCCCcEEEcccCcccccCCcccc-cccccccEEEccc--CccCCC-----CCccc--cCCCCccEEEccCCc
Q 045553 173 TIPAFFGQSPGFQVVSLSFNLLSGSVPEEFG-DNCVSLEHILLAA--NSLTGS-----IPPSL--GNCTELRSLLLSSNM 242 (1082)
Q Consensus 173 ~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~-~~l~~L~~L~L~~--N~l~~~-----~~~~~--~~l~~L~~L~L~~N~ 242 (1082)
.++. +. +++|++|+|..|.+.......+. ..+++|++|+|+. |...+. +...+ ..+++|++|+|++|.
T Consensus 186 ~l~~-~~-~~~L~~L~L~~~~l~~~~l~~l~~~~lp~L~~L~L~~~~~~~~~~~~~~~l~~~l~~~~~p~Lr~L~L~~~~ 263 (362)
T 2ra8_A 186 SIGK-KP-RPNLKSLEIISGGLPDSVVEDILGSDLPNLEKLVLYVGVEDYGFDGDMNVFRPLFSKDRFPNLKWLGIVDAE 263 (362)
T ss_dssp BCCS-CB-CTTCSEEEEECSBCCHHHHHHHHHSBCTTCCEEEEECBCGGGTCCSCGGGTGGGSCTTTCTTCCEEEEESCT
T ss_pred eecc-cc-CCCCcEEEEecCCCChHHHHHHHHccCCCCcEEEEeccccccccchhHHHHHHHHhcCCCCCcCEEeCCCCC
Confidence 2333 43 89999999999988744333343 2589999999863 222111 11222 357999999999999
Q ss_pred CCCCcCcccc---CCCCCCEEeCCCCcCccc----CCccccCCCCCcEEEeccccC
Q 045553 243 LQGDIPSSFG---QLVNLEVLDLSRNFLSGI----VPSELGMCKQLKVLVLRNDYG 291 (1082)
Q Consensus 243 l~~~~p~~~~---~l~~L~~L~Ls~N~l~~~----~p~~l~~l~~L~~L~l~~n~~ 291 (1082)
+.+..+..+. .+++|++|+|+.|.+.+. ++..+..+++|+.|++++|.+
T Consensus 264 i~~~~~~~la~a~~~~~L~~LdLs~n~L~d~G~~~L~~~L~~l~~L~~L~L~~n~i 319 (362)
T 2ra8_A 264 EQNVVVEMFLESDILPQLETMDISAGVLTDEGARLLLDHVDKIKHLKFINMKYNYL 319 (362)
T ss_dssp THHHHHHHHHHCSSGGGCSEEECCSSCCBHHHHHHHHTTHHHHTTCSEEECCSBBC
T ss_pred CchHHHHHHHhCccCCCCCEEECCCCCCChHHHHHHHhhcccCCcceEEECCCCcC
Confidence 9754443443 578999999999999864 344456679999999988643
No 415
>3r70_A Aminoglycoside phosphotransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE ADP PE3; 1.80A {Escherichia coli} PDB: 3r6z_A* 3uzr_A* 4dca_A* 3hav_A* 3ham_A*
Probab=98.36 E-value=1.7e-06 Score=96.02 Aligned_cols=137 Identities=19% Similarity=0.182 Sum_probs=102.0
Q ss_pred CccccceecccCceEEEEEEEcCCeEEEEEEeecCccccHHHHHHHHHHHhccCC----CceeeEeeeeccCCeEEEEEe
Q 045553 802 GFNVQNCIGSGGFGATYKAEIIPGVVVAVKRLSVGRFQGVQQFAAEIRTLGRVQH----PNLVTLIGYHVSEAEMFLIYN 877 (1082)
Q Consensus 802 ~~~~~~~lg~G~~g~Vy~a~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h----~niv~l~~~~~~~~~~~lV~E 877 (1082)
.+...+.++.|....||+. |..+++|+.... .....+.+|.++++.+.+ ..+.+++++ +..++|||
T Consensus 38 ~i~~v~~l~~G~~n~vy~v----g~~~vlR~~~~~--~~~~~~~~E~~~L~~L~~~~~~~~vP~v~~~----~~~~lvme 107 (320)
T 3r70_A 38 KINELRYLSSGDDSDTFLC----NEQYVVKVPKRD--SVRISQKRELELYRFLENCKLSYQIPAVVYQ----SDRFNIMK 107 (320)
T ss_dssp CCSCEEEEEECSSEEEEEE----TTTEEEEEESSH--HHHHHHHHHHHHHHHHTTSCCSSBCCCEEEE----CSSCEEEE
T ss_pred ceEEEEeCCCCCCceEEEE----CCEEEEEeCCcH--HHHHHHHHHHHHHHHHHhcCCCCCcceEEec----CCcEEEEe
Confidence 4555678999999999998 667888876432 224568899998888876 124455554 56789999
Q ss_pred ecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCC-------------------------------------
Q 045553 878 YLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECV------------------------------------- 920 (1082)
Q Consensus 878 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~------------------------------------- 920 (1082)
|++|.++...... .++..++..++.++++.++.||+...
T Consensus 108 ~i~G~~l~~~~~~----~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (320)
T 3r70_A 108 YIKGERITYEQYH----KLSEKEKDALAYDEATFLKELHSIEIDCSVSLFSDALVNKKDKFLQDKKLLISILEKEQLLTD 183 (320)
T ss_dssp CCCCBCCCHHHHT----TSCHHHHHHHHHHHHHHHHHHHHSCCCTTSHHHHTTBCCHHHHHHHHHHHHHHHHHHTTCCCH
T ss_pred ecCCccccccccc----cCCHHHHHHHHHHHHHHHHHHhCCCcccCCCccccccccchHHHHHHHHHHHHHHhhcccccc
Confidence 9999988643321 35667777888888888888885422
Q ss_pred -----------------------CCeEeccCCCCCEEEcCCCcEEEeecccceec
Q 045553 921 -----------------------PRVLHRDIKPSNILLDNNLNAYLSDFGLARLL 952 (1082)
Q Consensus 921 -----------------------~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~ 952 (1082)
+.++|+|++|.||+++.+..+.|+||+.+..-
T Consensus 184 ~~~~~~~~~~~~~l~~~~~~~~~~~~~H~D~~~~N~l~~~~~~~~~iD~~~~~~~ 238 (320)
T 3r70_A 184 EMLEHIETIYENILSNAVLFKYTPCLVHNDFSANNMIFRNNRLFGVIDFGDFNVG 238 (320)
T ss_dssp HHHHHHHHHHHHHHTCGGGTCCCCEEECSCCSGGGEEEETTEEEEECCCTTCEEE
T ss_pred cchHHHHHHHHHHHhccccccCCceeeECCCCCCcEEEECCceEEEECCcccccC
Confidence 24599999999999999766799999998754
No 416
>3d1u_A Putative fructosamine-3-kinase; YP_290396.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 1.85A {Thermobifida fusca} PDB: 3f7w_A
Probab=98.34 E-value=1.3e-06 Score=95.17 Aligned_cols=140 Identities=19% Similarity=0.190 Sum_probs=94.2
Q ss_pred ccceecccCceEEEEEEEcCCeEEEEEEeecCccccHHHHHHHHHHHhccCCC---ceeeEeeeeccCCeEEEEEeecCC
Q 045553 805 VQNCIGSGGFGATYKAEIIPGVVVAVKRLSVGRFQGVQQFAAEIRTLGRVQHP---NLVTLIGYHVSEAEMFLIYNYLPG 881 (1082)
Q Consensus 805 ~~~~lg~G~~g~Vy~a~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~---niv~l~~~~~~~~~~~lV~E~~~~ 881 (1082)
-.+.|+.|.++.||+++..+|+.++||+...........|.+|++.++.+.+. .+++++++. ..++||||+++
T Consensus 19 ~~~~l~gG~~n~vy~v~~~dG~~~vvK~~~~~~~~~~~~~~~E~~~L~~L~~~~~v~vP~v~~~~----~~~lvme~l~g 94 (288)
T 3d1u_A 19 AVAERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTLAMEWVDE 94 (288)
T ss_dssp EEEEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEEEEECCCC
T ss_pred ceeeeCCcchhheEEEEeCCCCeEEEEecCCCCcchhHHHHHHHHHHHHHHhcCCCCcCeEEEec----CcEEEEEeccc
Confidence 34679999999999999888999999997544333346789999999999875 477777764 36999999998
Q ss_pred CCHHH-----------HHhhCCCC-------------------CCCHHHHHH---H-----------------HHHHHHH
Q 045553 882 GNLEK-----------FIQDRPRR-------------------TVEWSMLHK---I-----------------ALDVARA 911 (1082)
Q Consensus 882 gsL~~-----------~l~~~~~~-------------------~l~~~~~~~---i-----------------~~~i~~~ 911 (1082)
+++.. -+|..... .-+|..... + ...+-+.
T Consensus 95 ~~~~~~~~~~lg~~LA~LH~~~~~~fG~~~~~~~G~~~q~~~w~~~W~~f~~~~rl~~~l~~a~~~~~~~~~~~~~~~~l 174 (288)
T 3d1u_A 95 RPPTPEAAERFGHQLAAMHLAGAESFGATWDGYIGPLPMDNTPRSTWPEFYAEQRILPYLRRAADRGALTPGDVRLVEKV 174 (288)
T ss_dssp CCCCHHHHHHHHHHHHHHHHTCCSSBBCSSCEEETTEEECCCCBSCHHHHHHHHHTHHHHHHHHHTTSSCHHHHHHHHHH
T ss_pred CCCChHHHHHHHHHHHHHHcCCCCccCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHH
Confidence 86531 12332111 123433210 0 1111122
Q ss_pred HHHHh----hCCCCCeEeccCCCCCEEEcCCCcEEEeecccce
Q 045553 912 LAYLH----DECVPRVLHRDIKPSNILLDNNLNAYLSDFGLAR 950 (1082)
Q Consensus 912 L~~LH----~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~ 950 (1082)
++.+. ....+.++|+|+.+.||+++.+ .+.|+|| .+.
T Consensus 175 ~~~l~~~l~~~~~~~l~HgD~~~~N~l~~~~-~~~~iD~-~~~ 215 (288)
T 3d1u_A 175 LDALDHLAGDPEPPARIHGDLWNGNVLWQDD-GAVVIDP-AAH 215 (288)
T ss_dssp HHTHHHHTCSCCCCEEECSCCSGGGEEEETT-EEEECSC-CCE
T ss_pred HHHHHHHhcCCCCCcceECCCCcCcEEEeCC-CeEEEcC-CcC
Confidence 22232 2235689999999999999984 5889999 654
No 417
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.32 E-value=4.7e-08 Score=104.05 Aligned_cols=64 Identities=39% Similarity=0.470 Sum_probs=31.3
Q ss_pred CCCCCCCEEEccCCCCCCC--CcccccCCCCCCEEEcCCCcCCccCchhhhcCc--ccchhhccCcccCC
Q 045553 564 TNFDSLRNLNLSRNHLQGP--LPSYINKMEDLKFLSLSLNNFTGAIPWELTQLA--SLEVLELSANSLSG 629 (1082)
Q Consensus 564 ~~l~~L~~L~L~~N~l~~~--~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~--~L~~L~Ls~N~l~~ 629 (1082)
.++++|+.|+|++|+|+++ +|..+..+++|+.|+|++|+|++. ..+..+. +|++|+|++|.+.+
T Consensus 167 ~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l~~l~~l~L~~L~L~~Npl~~ 234 (267)
T 3rw6_A 167 ENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--RELDKIKGLKLEELWLDGNSLCD 234 (267)
T ss_dssp HHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGGGGGTTSCCSEEECTTSTTGG
T ss_pred hhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhhhhcccCCcceEEccCCcCcc
Confidence 3455566666666666542 224444555555555555555533 1222222 44444444444443
No 418
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.30 E-value=9.8e-08 Score=96.77 Aligned_cols=99 Identities=11% Similarity=0.145 Sum_probs=70.7
Q ss_pred CccccccccccCCCCCCEEEcccC-CCccc----CChhhcCCCCCCEEeCcCCCCCCC----CCccccCCCCCCeEEccC
Q 045553 97 KLSGNLSRAIGDLTQLRVLLLAFN-GFSGE----LPLEIGQLSLLEILDLSFNSFHGP----IPPTLQNCSSLRLINLSG 167 (1082)
Q Consensus 97 ~l~g~l~~~l~~l~~L~~L~L~~n-~l~~~----~p~~~~~l~~L~~L~Ls~n~l~~~----~p~~l~~l~~L~~L~Ls~ 167 (1082)
.+...+...+...+.|++|+|++| .++.. +...+...++|++|+|++|.|... +...+...++|++|+|++
T Consensus 23 ~~~~~l~~~l~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~ 102 (185)
T 1io0_A 23 DVEETLKRIQNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVES 102 (185)
T ss_dssp CHHHHHHHHHTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCS
T ss_pred HHHHHHHHHHhcCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcC
Confidence 344556677888899999999998 88742 445567778888899988888743 344556667888888888
Q ss_pred cccccc----cCccccCCCCCcEEEc--ccCccc
Q 045553 168 NQFNGT----IPAFFGQSPGFQVVSL--SFNLLS 195 (1082)
Q Consensus 168 N~l~~~----~p~~~~~l~~L~~L~L--~~N~l~ 195 (1082)
|.|... +...+...++|++|+| ++|.+.
T Consensus 103 N~i~~~g~~~l~~~L~~n~~L~~L~L~~~~N~i~ 136 (185)
T 1io0_A 103 NFISGSGILALVEALQSNTSLIELRIDNQSQPLG 136 (185)
T ss_dssp SCCCHHHHHHHHHGGGGCSSCCEEECCCCSSCCC
T ss_pred CcCCHHHHHHHHHHHHhCCCceEEEecCCCCCCC
Confidence 888753 3455556667777777 667665
No 419
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.22 E-value=2e-07 Score=94.46 Aligned_cols=122 Identities=16% Similarity=0.165 Sum_probs=71.9
Q ss_pred CChhhcCCCCCCEEeCcCC-CCCCC----CCccccCCCCCCeEEccCccccccc----CccccCCCCCcEEEcccCcccc
Q 045553 126 LPLEIGQLSLLEILDLSFN-SFHGP----IPPTLQNCSSLRLINLSGNQFNGTI----PAFFGQSPGFQVVSLSFNLLSG 196 (1082)
Q Consensus 126 ~p~~~~~l~~L~~L~Ls~n-~l~~~----~p~~l~~l~~L~~L~Ls~N~l~~~~----p~~~~~l~~L~~L~L~~N~l~~ 196 (1082)
+...+...++|++|+|++| .|... +...+...++|++|+|++|+|.... ...+...++|++|+|++|.|..
T Consensus 28 l~~~l~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~ 107 (185)
T 1io0_A 28 LKRIQNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISG 107 (185)
T ss_dssp HHHHHTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCH
T ss_pred HHHHHhcCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCH
Confidence 4445666777888888877 77632 3445566677777777777776432 2333344555555555555542
Q ss_pred cCCcccccccccccEEEcccCccCCCCCccccCCCCccEEEc--cCCcCCCC----cCccccCCCCCCEEeCCCCcCc
Q 045553 197 SVPEEFGDNCVSLEHILLAANSLTGSIPPSLGNCTELRSLLL--SSNMLQGD----IPSSFGQLVNLEVLDLSRNFLS 268 (1082)
Q Consensus 197 ~~p~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L--~~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~ 268 (1082)
.... .+...+...++|++|+| ++|.|+.. +...+...++|++|+|++|.+.
T Consensus 108 ~g~~---------------------~l~~~L~~n~~L~~L~L~~~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~n~i~ 164 (185)
T 1io0_A 108 SGIL---------------------ALVEALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQQG 164 (185)
T ss_dssp HHHH---------------------HHHHGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSSHH
T ss_pred HHHH---------------------HHHHHHHhCCCceEEEecCCCCCCCHHHHHHHHHHHHhCCCcCEEeccCCCCC
Confidence 1111 12334555567777777 66777633 2344455577788888777764
No 420
>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*
Probab=98.14 E-value=1.1e-05 Score=88.83 Aligned_cols=135 Identities=20% Similarity=0.214 Sum_probs=95.4
Q ss_pred ceecccCceEEEEEEEcCCeEEEEEEeecCccccHHHHHHHHHHHhccCCC---ceeeEeeeec-cCCeEEEEEeecCCC
Q 045553 807 NCIGSGGFGATYKAEIIPGVVVAVKRLSVGRFQGVQQFAAEIRTLGRVQHP---NLVTLIGYHV-SEAEMFLIYNYLPGG 882 (1082)
Q Consensus 807 ~~lg~G~~g~Vy~a~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~---niv~l~~~~~-~~~~~~lV~E~~~~g 882 (1082)
+.++.|....||+. |..+++|+-. .......+.+|+++++.+.+. .+.+++.++. ..+..++||||++|.
T Consensus 25 ~~l~~G~~n~v~~v----g~~~VlR~~~--~~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~g~~~~v~e~i~G~ 98 (306)
T 3tdw_A 25 ESLGEGFRNYAILV----NGDWVFRFPK--SQQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDGNPFVGYRKVQGQ 98 (306)
T ss_dssp EEEEECSSEEEEEE----TTTEEEEEES--SHHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTTSCEEEEEECCCSE
T ss_pred eecCCCcceeEEEE----CCEEEEEecC--CchHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCCCceEEEEeccCCe
Confidence 56788888999987 5678888842 223456788999999999753 3556666664 455678999999998
Q ss_pred CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhC--------------------------------------------
Q 045553 883 NLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDE-------------------------------------------- 918 (1082)
Q Consensus 883 sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~-------------------------------------------- 918 (1082)
++.+.... .++......++.++++.|+.||+.
T Consensus 99 ~l~~~~~~----~l~~~~~~~~~~~lg~~La~LH~~~~~~~~~~g~p~~~w~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ 174 (306)
T 3tdw_A 99 ILGEDGMA----VLPDDAKDRLALQLAEFMNELSAFPVETAISAGVPVTNLKNKILLLSEAVEDQVFPLLDESLRDYLTL 174 (306)
T ss_dssp ECHHHHHT----TSCHHHHHHHHHHHHHHHHHHHHSCHHHHHHTTCCBCCHHHHHHHHHHHHHHHTGGGSCHHHHHHHHH
T ss_pred ECchhhhh----hCCHHHHHHHHHHHHHHHHHHhcCCcccccccCCChHHHHHHHHHHHHHHHHhcccccchhhHHHHHH
Confidence 88763221 234455555555566555555542
Q ss_pred -------------CCCCeEeccCCCCCEEEcC---CCc-EEEeeccccee
Q 045553 919 -------------CVPRVLHRDIKPSNILLDN---NLN-AYLSDFGLARL 951 (1082)
Q Consensus 919 -------------~~~~ivH~Dlk~~Nill~~---~~~-~kl~DfGla~~ 951 (1082)
..+.++|||+++.||+++. ++. +.|+||+.+..
T Consensus 175 ~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~ 224 (306)
T 3tdw_A 175 RFQSYMTHPVYTRYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAI 224 (306)
T ss_dssp HHHHHHHCHHHHCCCCEEECSCCSGGGEEECTTCSSCCEEEECCCTTCEE
T ss_pred HHHHHHhCcccccCCCeeEeCCCCcccEEEecCCCCCceEEEEehhhcCC
Confidence 2336799999999999987 455 48999998865
No 421
>3ovc_A Hygromycin-B 4-O-kinase; aminoglycoside phosphotransferase, structural genomics, PSI- protein structure initiative; HET: HY0 PE4; 1.95A {Escherichia coli} PDB: 3tyk_A*
Probab=98.01 E-value=2e-05 Score=88.73 Aligned_cols=142 Identities=14% Similarity=0.175 Sum_probs=90.8
Q ss_pred ccceecccCceEEEEEEEcCCeEEEEEEeecCccccHHHHHHHHHHHhccCCCc--eeeEeeeeccC-CeEEEEEeecCC
Q 045553 805 VQNCIGSGGFGATYKAEIIPGVVVAVKRLSVGRFQGVQQFAAEIRTLGRVQHPN--LVTLIGYHVSE-AEMFLIYNYLPG 881 (1082)
Q Consensus 805 ~~~~lg~G~~g~Vy~a~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~n--iv~l~~~~~~~-~~~~lV~E~~~~ 881 (1082)
..+.++.|....+|+.+. ++..+++|..... ..+..|+.+++.+.... +.++++++... +..++||||++|
T Consensus 45 ~i~~l~gG~~n~~y~v~~-~g~~~vlK~~~~~-----~~~~~E~~~l~~L~~~gvpvP~vl~~~~~~~g~~~lv~e~l~G 118 (362)
T 3ovc_A 45 DLMQLSEGEESRAFSFDV-GGRGYVLRVNSCA-----DGFYKDRYVYRHFASAALPIPEVLDIGEFSESLTYCISRRAQG 118 (362)
T ss_dssp EEEEEEECSSEEEEEEEE-TTEEEEEEEESCC-----HHHHHHHHHHHHHCCSSSCCCCEEEEEESSSSCEEEEEECCCS
T ss_pred eEEECCCCCcceEEEEEE-CCcEEEEEeCCch-----hhHHHHHHHHHHHHhcCCCCceEEEeccCCCCCeEEEEEecCC
Confidence 346789999999999875 4888999987432 25788888888886543 45677776654 678999999987
Q ss_pred CCHHHH------------------HhhCCCCC---------------CCHHHH---------------------HHHHHH
Q 045553 882 GNLEKF------------------IQDRPRRT---------------VEWSML---------------------HKIALD 907 (1082)
Q Consensus 882 gsL~~~------------------l~~~~~~~---------------l~~~~~---------------------~~i~~~ 907 (1082)
.++.+. +|...... -.|... ......
T Consensus 119 ~~l~~l~~~~~~~~~~~lg~~La~LH~~~~~~~~gl~~~~~~~~~~~~~w~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 198 (362)
T 3ovc_A 119 VTLQDLPETELPAVLQPVAEAMDAIAAADLSQTSGFGPFGPQGIGQYTTWRDFICAIADPHVYHWQTVMDDTVSASVAQA 198 (362)
T ss_dssp EETTTSCGGGSGGGHHHHHHHHHHHHHCCCTTCBCEEEECTTSBEEESSHHHHHHGGGCTTTCCHHHHCCTTTHHHHHHH
T ss_pred CCcccCCHHHHHHHHHHHHHHHHHHhcCCCccccCccCCCCCCCCccccHHHHHHHHHHHHHHHHHHHHhhcccccchHH
Confidence 655321 11111000 011111 011112
Q ss_pred HHHHHHHHhhC-CCCCeEeccCCCCCEEEcCCCcEEEeecccceec
Q 045553 908 VARALAYLHDE-CVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLL 952 (1082)
Q Consensus 908 i~~~L~~LH~~-~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~ 952 (1082)
+.....++... ..+.++|+|+.+.||+++.+..+.|+||+.+..-
T Consensus 199 ~~~l~~~l~~lp~~~~l~HgDl~~~Nil~~~~~~~~viD~~~~~~g 244 (362)
T 3ovc_A 199 LDELMLWAEDCPEVRHLVHADFGSNNVLTDNGRITAVIDWSEAMFG 244 (362)
T ss_dssp HHHHHHHGGGCCCCCEEECSSCSSTTEEEETTEEEEECCCTTCEEE
T ss_pred HHHHHHHHhhCCCCcEEEeCCCCCCeEEEeCCCEEEEECCcccccC
Confidence 22222333221 1257899999999999988777889999998753
No 422
>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*
Probab=97.99 E-value=3.3e-05 Score=83.32 Aligned_cols=141 Identities=17% Similarity=0.142 Sum_probs=99.7
Q ss_pred cCccccceecccCce-EEEEEEEc-CCeEEEEEEeecCccccHHHHHHHHHHHhccC-CCceeeEeeeeccCCeEEEEEe
Q 045553 801 AGFNVQNCIGSGGFG-ATYKAEII-PGVVVAVKRLSVGRFQGVQQFAAEIRTLGRVQ-HPNLVTLIGYHVSEAEMFLIYN 877 (1082)
Q Consensus 801 ~~~~~~~~lg~G~~g-~Vy~a~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~~~lV~E 877 (1082)
.+|+.. .+..|..| .||+.... ++..+++|+-... ....+.+|...++.+. +--+.++++++.+.+..++|||
T Consensus 25 ~g~~~~-~~~~G~S~~~v~rl~~~~~~~~~~lk~~~~~---~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~~~~lvme 100 (272)
T 4gkh_A 25 YGYRWA-RDNVGQSGATIYRLYGKPNAPELFLKHGKGS---VANDVTDEMVRLNWLTAFMPLPTIKHFIRTPDDAWLLTT 100 (272)
T ss_dssp TTCEEE-EEECSSSSCEEEEEECCTTCCCEEEEEEETH---HHHHHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEE
T ss_pred cCCeEE-EccCCCcCCeEEEEEecCCCeEEEEEECCCC---CHhHHHHHHHHHHHhccCCCcCeEEEEEEECCeEEEEEE
Confidence 344443 45556555 68987654 4567899986532 3456788999888774 2236778888888899999999
Q ss_pred ecCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCC--------------------------------------
Q 045553 878 YLPGGNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDEC-------------------------------------- 919 (1082)
Q Consensus 878 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~-------------------------------------- 919 (1082)
+++|.++.+..... ......++.++++.++.||+..
T Consensus 101 ~l~G~~~~~~~~~~------~~~~~~~~~~l~~~L~~Lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (272)
T 4gkh_A 101 AIPGKTAFQVLEEY------PDSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASDFDDERNGW 174 (272)
T ss_dssp CCCSEEHHHHHHHC------GGGHHHHHHHHHHHHHHHHTSCGGGCCBBCCHHHHHHHHHHHHHTTCCCGGGCCGGGTTC
T ss_pred eeCCccccccccCC------HHHHHHHHHHHHHHHHHhcCCCcccCCcCcccccchhhHHHHHHHhhhhhhhccccccch
Confidence 99998887765432 1223356666777777776421
Q ss_pred -----------------CCCeEeccCCCCCEEEcCCCcEEEeeccccee
Q 045553 920 -----------------VPRVLHRDIKPSNILLDNNLNAYLSDFGLARL 951 (1082)
Q Consensus 920 -----------------~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~ 951 (1082)
.+.++|||+.+.||+++.++.+-|+||+.+..
T Consensus 175 ~~~~~~~~l~~~~~~~~~~~l~HGDl~~~Nil~~~~~~~~viDwe~a~~ 223 (272)
T 4gkh_A 175 PVEQVWKEMHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVGI 223 (272)
T ss_dssp CHHHHHHHHHTTCCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCEE
T ss_pred HHHHHHHHHHhcccccCCcEEEcCCCCCCeEEEECCeEEEEEECccccc
Confidence 12378999999999999887778999998864
No 423
>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*
Probab=97.97 E-value=1e-05 Score=91.33 Aligned_cols=79 Identities=8% Similarity=0.045 Sum_probs=54.8
Q ss_pred cee-cccCceEEEEEEEc-------CCeEEEEEEeecCc---cccHHHHHHHHHHHhccCC---CceeeEeeeeccC---
Q 045553 807 NCI-GSGGFGATYKAEII-------PGVVVAVKRLSVGR---FQGVQQFAAEIRTLGRVQH---PNLVTLIGYHVSE--- 869 (1082)
Q Consensus 807 ~~l-g~G~~g~Vy~a~~~-------~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h---~niv~l~~~~~~~--- 869 (1082)
+.| +.|....+|+.... ++..+++|+..... ......+.+|+.+++.+.. -.+.++++++.+.
T Consensus 26 ~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~~~~ 105 (357)
T 3ats_A 26 SGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGDVL 105 (357)
T ss_dssp EEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEECSSTTT
T ss_pred EECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcCCCCCCcEEEEccCCCcc
Confidence 567 88989999998654 26788888865432 1012456778888887742 3467788877655
Q ss_pred CeEEEEEeecCCCCHH
Q 045553 870 AEMFLIYNYLPGGNLE 885 (1082)
Q Consensus 870 ~~~~lV~E~~~~gsL~ 885 (1082)
+..++||||++|..+.
T Consensus 106 g~~~~v~e~l~G~~l~ 121 (357)
T 3ats_A 106 GTPFFLMDYVEGVVPP 121 (357)
T ss_dssp SSCEEEEECCCCBCCC
T ss_pred CCceEEEEecCCCChh
Confidence 4578999999887654
No 424
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.76 E-value=7.7e-06 Score=80.57 Aligned_cols=84 Identities=8% Similarity=-0.077 Sum_probs=63.0
Q ss_pred CCCCEEEcccCCCcccCChhhcCCCCCCEEeCcCCC-CCCCCCccccCC----CCCCeEEccCcc-cccccCccccCCCC
Q 045553 110 TQLRVLLLAFNGFSGELPLEIGQLSLLEILDLSFNS-FHGPIPPTLQNC----SSLRLINLSGNQ-FNGTIPAFFGQSPG 183 (1082)
Q Consensus 110 ~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~-l~~~~p~~l~~l----~~L~~L~Ls~N~-l~~~~p~~~~~l~~ 183 (1082)
.+|++|||+++.++..--..+..+++|++|+|++|. |+..--..+..+ ++|++|+|++|. |+...-..+..+++
T Consensus 61 ~~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~ 140 (176)
T 3e4g_A 61 YKIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRN 140 (176)
T ss_dssp CCEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTT
T ss_pred ceEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCC
Confidence 478889999888876655667888888888888884 775555556664 368888888874 77655566777888
Q ss_pred CcEEEcccCc
Q 045553 184 FQVVSLSFNL 193 (1082)
Q Consensus 184 L~~L~L~~N~ 193 (1082)
|++|+|+++.
T Consensus 141 L~~L~L~~c~ 150 (176)
T 3e4g_A 141 LKYLFLSDLP 150 (176)
T ss_dssp CCEEEEESCT
T ss_pred CCEEECCCCC
Confidence 8888888775
No 425
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=97.73 E-value=1.5e-05 Score=74.98 Aligned_cols=71 Identities=21% Similarity=0.289 Sum_probs=50.3
Q ss_pred hhhccCcccC-CCCCccccCCcccceecccCcccCCCCCCCCCCCCcccEEeccCCccccCCCCCcccccccCCCCCCCC
Q 045553 619 VLELSANSLS-GEIPSEFSKLEHLNVLRLDHNNLTGRIPPGFGTRSSLSIFDVSFNNLSGSAPRNSLIKCENVQGNPNLQ 697 (1082)
Q Consensus 619 ~L~Ls~N~l~-~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~l~ls~N~l~~~~p~~~~~~~~~~~~Np~~c 697 (1082)
.++.+++.++ ..+|..+. ++|+.|+|++|+|+...+..|..+++|+.|+| .+|||.|
T Consensus 12 ~v~Cs~~~L~~~~vP~~lp--~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L--------------------~~NP~~C 69 (130)
T 3rfe_A 12 LVDCGRRGLTWASLPTAFP--VDTTELVLTGNNLTALPPGLLDALPALRTAHL--------------------GANPWRC 69 (130)
T ss_dssp EEECCSSCCCTTTSCSCCC--TTCSEEECTTSCCSSCCTTTGGGCTTCCEEEC--------------------CSSCCBC
T ss_pred EEEeCCCCCccccCCCCCC--cCCCEEECCCCcCCccChhhhhhccccCEEEe--------------------cCCCeec
Confidence 5666777765 24454433 46888899999998776777888888888877 5677889
Q ss_pred CCCCCCCCCcccccC
Q 045553 698 LCHTDPSSSEWERQH 712 (1082)
Q Consensus 698 ~c~~~~~~~~~~~~~ 712 (1082)
+|. ..|...|....
T Consensus 70 dC~-l~~l~~wl~~~ 83 (130)
T 3rfe_A 70 DCR-LVPLRAWLAGR 83 (130)
T ss_dssp SGG-GHHHHHHHHTS
T ss_pred cCc-cHHHHHHHHhC
Confidence 998 55566666543
No 426
>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}
Probab=97.64 E-value=0.00018 Score=80.33 Aligned_cols=140 Identities=18% Similarity=0.282 Sum_probs=80.0
Q ss_pred ceecccCceEEEEEEEcCCeEEEEEEeecCccccHHHHHHHHHHHhccCC--CceeeEeee------eccCCeEEEEEee
Q 045553 807 NCIGSGGFGATYKAEIIPGVVVAVKRLSVGRFQGVQQFAAEIRTLGRVQH--PNLVTLIGY------HVSEAEMFLIYNY 878 (1082)
Q Consensus 807 ~~lg~G~~g~Vy~a~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h--~niv~l~~~------~~~~~~~~lV~E~ 878 (1082)
+.|+.|..+.||+....+| .+++|+.... ...+..|+++++.+.. -.+.+++.. ....+..++||||
T Consensus 38 ~~l~gG~~n~~~~v~~~~~-~~vlk~~~~~----~~~~~~e~~~l~~L~~~g~~vp~~~~~~~g~~~~~~~~~~~~l~~~ 112 (346)
T 2q83_A 38 DVIQGNQMALVWKVHTDSG-AVCLKRIHRP----EKKALFSIFAQDYLAKKGMNVPGILPNKKGSLYSKHGSFLFVVYDW 112 (346)
T ss_dssp EECC----CEEEEEEETTE-EEEEEEECSC----HHHHHHHHHHHHHHHHHTCSSCCBCCCTTSCSCEEETTEEEEEEEC
T ss_pred eeccccccCcEEEEEeCCC-CEEEEecCCC----HHHHHHHHHHHHHHHHcCCCCCceeecCCCCEEEEECCEEEEEEEe
Confidence 3466677899999987654 5889988652 2333445555554431 123344431 1235678999999
Q ss_pred cCCCCHH--------------HHHhhC------CC------CCCCHHHH-------------------------------
Q 045553 879 LPGGNLE--------------KFIQDR------PR------RTVEWSML------------------------------- 901 (1082)
Q Consensus 879 ~~~gsL~--------------~~l~~~------~~------~~l~~~~~------------------------------- 901 (1082)
++|..+. .-+|.. +. ....|...
T Consensus 113 i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 192 (346)
T 2q83_A 113 IEGRPFELTVKQDLEFIMKGLADFHTASVGYQPPNGVPIFTKLGRWPNHYTKRCKQMETWKLMAEAEKEDPFSQLYLQEI 192 (346)
T ss_dssp CCCBCCCTTSHHHHHHHHHHHHHHHHHHTTCCCCTTCCCCBCTTCHHHHHHHHHHHHHHHHHHHHHCSSCHHHHHHHHHH
T ss_pred ecCccCCCCCHHHHHHHHHHHHHHHHhCCCCCCCccchhcccccchHHHHHHHHHHHHHHHHHHHhccCCcHHHHHHHHH
Confidence 9886542 112211 00 01123211
Q ss_pred HHHHHHHHHHHHHHhh----------CCCCCeEeccCCCCCEEEcCCCcEEEeeccccee
Q 045553 902 HKIALDVARALAYLHD----------ECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARL 951 (1082)
Q Consensus 902 ~~i~~~i~~~L~~LH~----------~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~ 951 (1082)
..+...+..++++|+. ...+.++|||+.+.||+++.++.+.|+||+.+..
T Consensus 193 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDfe~a~~ 252 (346)
T 2q83_A 193 DGFIEDGLRIKDRLLQSTYVPWTEQLKKSPNLCHQDYGTGNTLLGENEQIWVIDLDTVSF 252 (346)
T ss_dssp HHHHHHHHHHHHHHHHTTHHHHHHHHHHSCCEECSSCSTTSEEECGGGCEEECCCTTCEE
T ss_pred HHHHHHHHHHHHHHHhchHHHHHHhccccCceecCCCCcccEEEeCCCcEEEEehhhccc
Confidence 1111223445666663 1235899999999999998888999999998753
No 427
>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*
Probab=97.59 E-value=0.00017 Score=82.54 Aligned_cols=75 Identities=12% Similarity=0.024 Sum_probs=48.6
Q ss_pred cceecccCceEEEEEEEc-CCeEEEEEEeecCcc-------ccHHHHHHHHHHHhccCC--C-ceeeEeeeeccCCeEEE
Q 045553 806 QNCIGSGGFGATYKAEII-PGVVVAVKRLSVGRF-------QGVQQFAAEIRTLGRVQH--P-NLVTLIGYHVSEAEMFL 874 (1082)
Q Consensus 806 ~~~lg~G~~g~Vy~a~~~-~~~~vavK~~~~~~~-------~~~~~~~~e~~~l~~l~h--~-niv~l~~~~~~~~~~~l 874 (1082)
.+.||.|..+.||++... +++.++||....... .....+..|.++++.+.. + .+.+++.+. .+..++
T Consensus 35 ~~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~d--~~~~~l 112 (397)
T 2olc_A 35 CQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYSD--TEMAVT 112 (397)
T ss_dssp EEECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEEE--TTTTEE
T ss_pred EEECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEEc--CCccEE
Confidence 357899999999999643 468899998643211 123456778888887742 3 344555543 345689
Q ss_pred EEeecCCC
Q 045553 875 IYNYLPGG 882 (1082)
Q Consensus 875 V~E~~~~g 882 (1082)
||||+++.
T Consensus 113 vmE~l~g~ 120 (397)
T 2olc_A 113 VMEDLSHL 120 (397)
T ss_dssp EECCCTTS
T ss_pred EEEeCCCc
Confidence 99999764
No 428
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.56 E-value=2e-05 Score=77.60 Aligned_cols=35 Identities=9% Similarity=-0.002 Sum_probs=20.1
Q ss_pred CCCCEEeCcCCCCCCCCCccccCCCCCCeEEccCc
Q 045553 134 SLLEILDLSFNSFHGPIPPTLQNCSSLRLINLSGN 168 (1082)
Q Consensus 134 ~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N 168 (1082)
.+|+.|||+++.|+..--..+.++++|++|+|++|
T Consensus 61 ~~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C 95 (176)
T 3e4g_A 61 YKIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKC 95 (176)
T ss_dssp CCEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESC
T ss_pred ceEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCC
Confidence 35666666666655444444555556666666655
No 429
>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}
Probab=97.46 E-value=0.00042 Score=75.80 Aligned_cols=137 Identities=16% Similarity=0.189 Sum_probs=92.4
Q ss_pred cceecccCceEEEEEEEcCCeEEEEEEeecCccccHHHHHHHHHHHhccC---CCceeeEeeeeccCCeEEEEEeecCCC
Q 045553 806 QNCIGSGGFGATYKAEIIPGVVVAVKRLSVGRFQGVQQFAAEIRTLGRVQ---HPNLVTLIGYHVSEAEMFLIYNYLPGG 882 (1082)
Q Consensus 806 ~~~lg~G~~g~Vy~a~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~---h~niv~l~~~~~~~~~~~lV~E~~~~g 882 (1082)
.+.|+.|....+|+.+. ++..+++|+.... ....+.+|++.++.+. ...++++++++...+..++||||+++.
T Consensus 41 ~~~l~gG~~n~~y~v~~-~~~~~vlK~~~~~---~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g~~~lvme~l~G~ 116 (312)
T 3jr1_A 41 KEKLYSGEMNEIWLIND-EVQTVFVKINERS---YRSMFRAEADQLALLAKTNSINVPLVYGIGNSQGHSFLLLEALNKS 116 (312)
T ss_dssp EEEECCSSSSEEEEEES-SSCEEEEEEEEGG---GHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSSEEEEEEECCCCC
T ss_pred eEEeCCccceeeeEEEE-CCCeEEEEeCCcc---cHHHHHHHHHHHHHHHhhCCCCcceEEEEeecCCceEEEEEeccCC
Confidence 35689999999999875 4678889987532 3567888998888874 356888888888888899999999987
Q ss_pred CHHH-----------HHhhCCC-C-------------------CCCHHHHH---HHHH----------------HHHHH-
Q 045553 883 NLEK-----------FIQDRPR-R-------------------TVEWSMLH---KIAL----------------DVARA- 911 (1082)
Q Consensus 883 sL~~-----------~l~~~~~-~-------------------~l~~~~~~---~i~~----------------~i~~~- 911 (1082)
.+.. -+|.... . .-+|.... ++.. .+...
T Consensus 117 ~~~~~~~~~lG~~LA~LH~~~~~~~fG~~~~~~~G~~~q~n~w~~~W~~f~~~~Rl~~~l~~a~~~g~~~~~~~~l~~~l 196 (312)
T 3jr1_A 117 KNKQSSFTIFAEKIAQLHQIQGPDKYGLDFDTWLGPIYQPNDWQTSWAKFFSENRIGWQLQICKEKGLIFGNIDLIVQIV 196 (312)
T ss_dssp CCCTTHHHHHHHHHHHHHHCCCCSSBBCSSCEEETTEEECCCCBSCHHHHHHHHTHHHHHHHHHHHTCCCSCHHHHHHHH
T ss_pred CCCchhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcCCCCCCcCCHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHH
Confidence 5421 2333211 0 12455432 1111 11111
Q ss_pred HHHHhh-CCCCCeEeccCCCCCEEEcCCCcEEEeecc
Q 045553 912 LAYLHD-ECVPRVLHRDIKPSNILLDNNLNAYLSDFG 947 (1082)
Q Consensus 912 L~~LH~-~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG 947 (1082)
...|.. ...+.++|+|+.+.|++++.++ +.|.|++
T Consensus 197 ~~~L~~~~~~~~l~HgD~~~~N~l~~~~~-~~~iD~~ 232 (312)
T 3jr1_A 197 ADTLSKHNPKPSILHGNLWIENCIQVDDK-IFVCNPA 232 (312)
T ss_dssp HHHHTTCCCCCEEECSSCSGGGEEEETTE-EEECSCC
T ss_pred HHHhccCCCCceeEeCCCCcCcEeecCCC-eEEEcCc
Confidence 123422 2356899999999999999887 8899984
No 430
>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}
Probab=97.43 E-value=0.00027 Score=76.88 Aligned_cols=78 Identities=17% Similarity=0.130 Sum_probs=57.6
Q ss_pred CccccceecccCceEEEEEEEcCCeEEEEEEeecCccccHHHHHHHHHHHhccCCC---ceeeEeeeeccCCeEEEEEee
Q 045553 802 GFNVQNCIGSGGFGATYKAEIIPGVVVAVKRLSVGRFQGVQQFAAEIRTLGRVQHP---NLVTLIGYHVSEAEMFLIYNY 878 (1082)
Q Consensus 802 ~~~~~~~lg~G~~g~Vy~a~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~---niv~l~~~~~~~~~~~lV~E~ 878 (1082)
...-.+.+|.|..+.||+.+..+|+.|+||+-..........|.+|++.|+.+.-. -+++++++. ..++||||
T Consensus 16 ~v~~v~~~g~G~~~~vyrv~l~DG~~~~vK~~~~~~~~~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~~----~~~lv~e~ 91 (288)
T 3f7w_A 16 EVAAVAERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTLAMEW 91 (288)
T ss_dssp CEEEEEEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEEEEEC
T ss_pred CeEEEEecCCCCCeEEEEEEECCCCEEEEEEeCCCCcchhhHHHHHHHHHHHHHhhCCCCcceEEecc----CceEEEEe
Confidence 34445779999999999999999999999987655444445678899998887422 244555543 34789999
Q ss_pred cCCCC
Q 045553 879 LPGGN 883 (1082)
Q Consensus 879 ~~~gs 883 (1082)
++++.
T Consensus 92 l~~~~ 96 (288)
T 3f7w_A 92 VDERP 96 (288)
T ss_dssp CCCCC
T ss_pred ecccC
Confidence 98764
No 431
>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}
Probab=97.35 E-value=0.00017 Score=83.10 Aligned_cols=79 Identities=10% Similarity=0.018 Sum_probs=48.1
Q ss_pred CCCeEeccCCCCCEEEcCCCcEEEeecccceecCCCCCccccCcccCCCcccchhcccC---CCCchhhHHHHHHHHHHH
Q 045553 920 VPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGTSETHATTDVAGTFGYVAPEYAMTC---RVSDKADVYSFGVVLLEL 996 (1082)
Q Consensus 920 ~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~---~~~~~~Dv~slGvll~el 996 (1082)
.+.++|||+++.||+++.++ ++|+||+.+..-.....-...-..-...|++|+..... ......++......+|+.
T Consensus 231 ~~~liHGDl~~~Nil~~~~~-~~lID~e~a~~G~p~~Dla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (420)
T 2pyw_A 231 AQALIHGDLHTGSVMVTQDS-TQVIDPEFSFYGPMGFDIGAYLGNLILAFFAQDGHATQENDRKEYKQWILRTIEQTWNL 309 (420)
T ss_dssp CCEEECSCCSGGGEEECSSC-EEECCCTTCEEECHHHHHHHHHHHHHHHHHHGGGGCCSSCCSHHHHHHHHHHHHHHHHH
T ss_pred CCeEEecCCCCCcEEEeCCC-CEEEeCcccccCchHHHHHHHHHHHHHHHHhcccccccccchHHHHHHHHHHHHHHHHH
Confidence 34899999999999999876 99999999875321111000000001346666655321 112235566778888877
Q ss_pred HhC
Q 045553 997 ISD 999 (1082)
Q Consensus 997 ltg 999 (1082)
+.+
T Consensus 310 y~~ 312 (420)
T 2pyw_A 310 FNK 312 (420)
T ss_dssp HHH
T ss_pred HHH
Confidence 765
No 432
>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6
Probab=97.06 E-value=0.002 Score=71.15 Aligned_cols=158 Identities=13% Similarity=0.138 Sum_probs=88.7
Q ss_pred ccHHHHHHHhcCccc-----cceecccCceEEEEEEEcCCeEEEEEEeecCccccHHHHHHHHHHHhccCCCc--eeeEe
Q 045553 791 LTYENVVRATAGFNV-----QNCIGSGGFGATYKAEIIPGVVVAVKRLSVGRFQGVQQFAAEIRTLGRVQHPN--LVTLI 863 (1082)
Q Consensus 791 ~~~~~~~~~~~~~~~-----~~~lg~G~~g~Vy~a~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~n--iv~l~ 863 (1082)
++.+++......|.+ .+.|+.|....+|+....+| .+++|+..... ....+..|+.+++.+...+ +.+++
T Consensus 7 ~~~~~l~~~l~~~~~~~~~~~~~i~~G~~n~~~~v~~~~g-~~vlk~~~~~~--~~~~l~~e~~~l~~L~~~g~~vP~~~ 83 (322)
T 2ppq_A 7 ITEDELRNFLTQYDVGSLTSYKGIAEGVENSNFLLHTTKD-PLILTLYEKRV--EKNDLPFFLGLMQHLAAKGLSCPLPL 83 (322)
T ss_dssp CCHHHHHHHHTTBCCCCEEEEEEECC---EEEEEEEESSC-CEEEEEECC-----CCHHHHHHHHHHHHHHTTCCCCCBC
T ss_pred CCHHHHHHHHHhCCCCcceEeeccCCCcccceEEEEeCCc-cEEEEEeCCCC--CHHHHHHHHHHHHHHHHCCCCCCccc
Confidence 455666666666655 23566788899999987655 67889876521 1234556777766664222 33344
Q ss_pred eee------ccCCeEEEEEeecCCCCHHH--------------HHhhC----CCCC------CCHHHHHH----------
Q 045553 864 GYH------VSEAEMFLIYNYLPGGNLEK--------------FIQDR----PRRT------VEWSMLHK---------- 903 (1082)
Q Consensus 864 ~~~------~~~~~~~lV~E~~~~gsL~~--------------~l~~~----~~~~------l~~~~~~~---------- 903 (1082)
... ...+..++||||++|..+.. -+|.. .... ..|.....
T Consensus 84 ~~~~g~~~~~~~g~~~~l~~~l~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~ 163 (322)
T 2ppq_A 84 PRKDGELLGELSGRPAALISFLEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERADEVE 163 (322)
T ss_dssp CBTTCCSCEEETTEEEEEEECCCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGGGTS
T ss_pred CCCCCCEEEEECCEEEEEEEeCCCcCCCCCCHHHHHHHHHHHHHHHHHhccCCCcccCccChHHHHHHHHHHHHHHHhhh
Confidence 321 12356789999998865321 11211 0000 11222110
Q ss_pred --HHHHHHHHHHHHhhC----CCCCeEeccCCCCCEEEcCCCcEEEeeccccee
Q 045553 904 --IALDVARALAYLHDE----CVPRVLHRDIKPSNILLDNNLNAYLSDFGLARL 951 (1082)
Q Consensus 904 --i~~~i~~~L~~LH~~----~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~ 951 (1082)
+...+.+.+++++.. ..++++|+|+.+.||+++++..+.|+||+.+..
T Consensus 164 ~~l~~~l~~~~~~l~~~~~~~~~~~liHgDl~~~Nil~~~~~~~~lIDf~~a~~ 217 (322)
T 2ppq_A 164 KGLREEIRPEIDYLAAHWPKDLPAGVIHADLFQDNVFFLGDELSGLIDFYFACN 217 (322)
T ss_dssp TTHHHHHHHHHHHHHHHCCCSSCEEEECSCCCGGGEEEETTEEEEECCCTTCEE
T ss_pred hhhHHHHHHHHHHHHhhCcccCCcccCCCCCCccCEEEeCCceEEEecchhccC
Confidence 011234455555532 234789999999999999876668999998753
No 433
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=96.92 E-value=0.00028 Score=70.79 Aligned_cols=94 Identities=14% Similarity=0.092 Sum_probs=65.1
Q ss_pred cccccccccCCCCCCEEEcccC-CCcc----cCChhhcCCCCCCEEeCcCCCCCCC----CCccccCCCCCCeEEccCcc
Q 045553 99 SGNLSRAIGDLTQLRVLLLAFN-GFSG----ELPLEIGQLSLLEILDLSFNSFHGP----IPPTLQNCSSLRLINLSGNQ 169 (1082)
Q Consensus 99 ~g~l~~~l~~l~~L~~L~L~~n-~l~~----~~p~~~~~l~~L~~L~Ls~n~l~~~----~p~~l~~l~~L~~L~Ls~N~ 169 (1082)
...+...+.+-+.|++|+|++| +|.. .+-+.+..-+.|+.|+|++|.|... +.+.+..-+.|++|+|++|+
T Consensus 30 ~~~l~~ll~~n~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~ 109 (197)
T 1pgv_A 30 ESCINRLREDDTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNF 109 (197)
T ss_dssp HHHHHHHHTTCSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSB
T ss_pred HHHHHHHHhcCCCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCc
Confidence 3345556677788999999885 7763 2455567778899999999988743 34455667888888888888
Q ss_pred cccccC----ccccCCCCCcEEEcccC
Q 045553 170 FNGTIP----AFFGQSPGFQVVSLSFN 192 (1082)
Q Consensus 170 l~~~~p----~~~~~l~~L~~L~L~~N 192 (1082)
|..... .++..-+.|++|+|++|
T Consensus 110 Ig~~Ga~ala~aL~~N~tL~~L~L~n~ 136 (197)
T 1pgv_A 110 LTPELLARLLRSTLVTQSIVEFKADNQ 136 (197)
T ss_dssp CCHHHHHHHHHHTTTTCCCSEEECCCC
T ss_pred CCHHHHHHHHHHHhhCCceeEEECCCC
Confidence 885432 34444556777777654
No 434
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=96.88 E-value=0.00025 Score=71.22 Aligned_cols=119 Identities=11% Similarity=0.103 Sum_probs=66.0
Q ss_pred hhhcCCCCCCEEeCcCC-CCCCC----CCccccCCCCCCeEEccCcccccccC----ccccCCCCCcEEEcccCcccccC
Q 045553 128 LEIGQLSLLEILDLSFN-SFHGP----IPPTLQNCSSLRLINLSGNQFNGTIP----AFFGQSPGFQVVSLSFNLLSGSV 198 (1082)
Q Consensus 128 ~~~~~l~~L~~L~Ls~n-~l~~~----~p~~l~~l~~L~~L~Ls~N~l~~~~p----~~~~~l~~L~~L~L~~N~l~~~~ 198 (1082)
..+..-+.|++|+|++| .|... +.+.+..-+.|++|+|++|+|..... ..+..-+.|++|+|+.|.|....
T Consensus 35 ~ll~~n~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~G 114 (197)
T 1pgv_A 35 RLREDDTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPEL 114 (197)
T ss_dssp HHHTTCSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHH
T ss_pred HHHhcCCCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHH
Confidence 33455567888888775 66532 34455666777777777777764332 23333455555555555554221
Q ss_pred CcccccccccccEEEcccCccCCCCCccccCCCCccEEEccCC---cCCC----CcCccccCCCCCCEEeCCCCcC
Q 045553 199 PEEFGDNCVSLEHILLAANSLTGSIPPSLGNCTELRSLLLSSN---MLQG----DIPSSFGQLVNLEVLDLSRNFL 267 (1082)
Q Consensus 199 p~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N---~l~~----~~p~~~~~l~~L~~L~Ls~N~l 267 (1082)
-.. +...+..-+.|++|+|++| .+.. .+.+.+..-+.|+.|+++.|.+
T Consensus 115 a~a---------------------la~aL~~N~tL~~L~L~n~~~~~ig~~g~~~ia~aL~~N~tL~~L~l~~~~~ 169 (197)
T 1pgv_A 115 LAR---------------------LLRSTLVTQSIVEFKADNQRQSVLGNQVEMDMMMAIEENESLLRVGISFASM 169 (197)
T ss_dssp HHH---------------------HHHHTTTTCCCSEEECCCCSSCCCCHHHHHHHHHHHHHCSSCCEEECCCCCH
T ss_pred HHH---------------------HHHHHhhCCceeEEECCCCcCcCcCHHHHHHHHHHHHhCCCcCeEeccCCCc
Confidence 111 1223444456777777654 2331 1334455566777777776655
No 435
>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}
Probab=96.80 E-value=0.0055 Score=67.95 Aligned_cols=141 Identities=12% Similarity=0.053 Sum_probs=72.9
Q ss_pred ceecccCceE-EEEEEEcCCeEEEEEEeecCccccHHHHHHHHHHHhccCC--CceeeEeeeeccCCeEEEEEeecCCCC
Q 045553 807 NCIGSGGFGA-TYKAEIIPGVVVAVKRLSVGRFQGVQQFAAEIRTLGRVQH--PNLVTLIGYHVSEAEMFLIYNYLPGGN 883 (1082)
Q Consensus 807 ~~lg~G~~g~-Vy~a~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h--~niv~l~~~~~~~~~~~lV~E~~~~gs 883 (1082)
+.|+.|+... +|+....+|..+++|....... ..+..|+.+++.+.. -.+.+++.+..+.+ ++|||++.+..
T Consensus 24 ~~l~gg~s~~~~~r~~~~~~~~~vlk~~~~~~~---~~~~~e~~~l~~L~~~g~~vP~v~~~d~~~g--~ll~e~l~~~~ 98 (333)
T 3csv_A 24 TPLAGDASSRRYQRLRSPTGAKAVLMDWSPEEG---GDTQPFVDLAQYLRNLDISAPEIYAEEHARG--LLLIEDLGDAL 98 (333)
T ss_dssp CC--------CCEEEECTTCCEEEEEECCTTTT---CCSHHHHHHHHHHHHTTCBCCCEEEEETTTT--EEEECCCCSCB
T ss_pred eECCCCCCCceEEEEEcCCCCeEEEEECCCCCC---ccccHHHHHHHHHHhCCCCCCceeeecCCCC--EEEEeeCCCcc
Confidence 3465555444 6676554466777776543221 223445666555532 23556676654443 78999997766
Q ss_pred HHHHHhhC---------------------CC---CCCCHHHHH-------H-------------HHHHHHHHHHHHh---
Q 045553 884 LEKFIQDR---------------------PR---RTVEWSMLH-------K-------------IALDVARALAYLH--- 916 (1082)
Q Consensus 884 L~~~l~~~---------------------~~---~~l~~~~~~-------~-------------i~~~i~~~L~~LH--- 916 (1082)
+.+++... .. ..++..... . ....+...++.+.
T Consensus 99 l~~~l~~~~~~~~~~~~~~~~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~l~~~~ 178 (333)
T 3csv_A 99 FTEVINNDPAQEMPLYRAAVDLLIHLHDAQTPELARLDPETLSEMTRLAFSEYRYAILGDAAEDNRKRFEHRFAQILSAQ 178 (333)
T ss_dssp HHHHHHHCGGGHHHHHHHHHHHHHHHHTSCCCCCCBCCHHHHHHTTTHHHHTHHHHHHSSCCHHHHHHHHHHHHHHHHHH
T ss_pred hHHHhcCCCccHHHHHHHHHHHHHHHhcCCCccCCccCHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHhc
Confidence 65444321 00 012111110 0 0011112222221
Q ss_pred hCCCCCeEeccCCCCCEEEcCC----CcEEEeecccceec
Q 045553 917 DECVPRVLHRDIKPSNILLDNN----LNAYLSDFGLARLL 952 (1082)
Q Consensus 917 ~~~~~~ivH~Dlk~~Nill~~~----~~~kl~DfGla~~~ 952 (1082)
....+.++|||+.+.||+++.+ ..+.|+||+.+..-
T Consensus 179 ~~~~~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~G 218 (333)
T 3csv_A 179 LEGDMVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKLG 218 (333)
T ss_dssp CCSCCEEECSCCSGGGEEECTTSCGGGGEEECCCTTCEEE
T ss_pred ccCCCeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCcC
Confidence 1123479999999999999875 68999999998753
No 436
>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8
Probab=96.79 E-value=0.0021 Score=73.85 Aligned_cols=72 Identities=15% Similarity=0.126 Sum_probs=49.3
Q ss_pred ceecccCceEEEEEEEcC--------CeEEEEEEeecCccccHHHHHHHHHHHhccCCCce-eeEeeeeccCCeEEEEEe
Q 045553 807 NCIGSGGFGATYKAEIIP--------GVVVAVKRLSVGRFQGVQQFAAEIRTLGRVQHPNL-VTLIGYHVSEAEMFLIYN 877 (1082)
Q Consensus 807 ~~lg~G~~g~Vy~a~~~~--------~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~ni-v~l~~~~~~~~~~~lV~E 877 (1082)
+.|+.|....+|++...+ +..+++|+..... ....+.+|+.+++.+...++ .++++.+.+ .+|||
T Consensus 79 ~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~~--~~~~li~E~~~l~~L~~~g~~P~l~~~~~~----g~v~e 152 (429)
T 1nw1_A 79 SRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNPE--TESHLVAESVIFTLLSERHLGPKLYGIFSG----GRLEE 152 (429)
T ss_dssp EEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSCC--CHHHHHHHHHHHHHHHHTTSSSCEEEEETT----EEEEC
T ss_pred EEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCCC--cHHHHHHHHHHHHHHHhCCCCCcEEEEeCC----CEEEE
Confidence 568888899999998753 4789999874321 12455678888887753333 566766543 38999
Q ss_pred ecCCCCH
Q 045553 878 YLPGGNL 884 (1082)
Q Consensus 878 ~~~~gsL 884 (1082)
|++|.++
T Consensus 153 ~l~G~~l 159 (429)
T 1nw1_A 153 YIPSRPL 159 (429)
T ss_dssp CCCEEEC
T ss_pred EeCCccc
Confidence 9986443
No 437
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=96.73 E-value=0.0018 Score=60.74 Aligned_cols=54 Identities=24% Similarity=0.396 Sum_probs=25.9
Q ss_pred EEEccCCccc-ccCCccccccCCcccEEEccCCcccccCccccCCCCCCCEEEccCCC
Q 045553 522 IFDIGNNKLI-GEVPSDMGSHCKCMKFLSMAGNEFVGLIPQSFTNFDSLRNLNLSRNH 578 (1082)
Q Consensus 522 ~l~l~~n~l~-~~ip~~~~~~~~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~ 578 (1082)
++++++++++ ..+|..+. .+|++|+|++|+|+.+.++.|..+++|+.|+|++|.
T Consensus 12 ~v~Cs~~~L~~~~vP~~lp---~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP 66 (130)
T 3rfe_A 12 LVDCGRRGLTWASLPTAFP---VDTTELVLTGNNLTALPPGLLDALPALRTAHLGANP 66 (130)
T ss_dssp EEECCSSCCCTTTSCSCCC---TTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSC
T ss_pred EEEeCCCCCccccCCCCCC---cCCCEEECCCCcCCccChhhhhhccccCEEEecCCC
Confidence 6677777664 35555433 224444444444444444444444444444444443
No 438
>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6
Probab=96.65 E-value=0.014 Score=64.48 Aligned_cols=157 Identities=15% Similarity=0.162 Sum_probs=88.6
Q ss_pred ccHHHHHHHhcCccc-----cceecccCceEEEEEEEcCCeEEEEEEeecCccccHHHHHHHHHHHhccCCCc--eeeEe
Q 045553 791 LTYENVVRATAGFNV-----QNCIGSGGFGATYKAEIIPGVVVAVKRLSVGRFQGVQQFAAEIRTLGRVQHPN--LVTLI 863 (1082)
Q Consensus 791 ~~~~~~~~~~~~~~~-----~~~lg~G~~g~Vy~a~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~n--iv~l~ 863 (1082)
++.+.+......|.+ ...++ |....||+....+|+.+++|...... .....+..|..+++.+.... +++++
T Consensus 11 l~~~~i~~~l~~~g~~~~~~~~~l~-g~~n~~y~v~~~~g~~~vlK~~~~~~-~~~~~~~~E~~~~~~L~~~g~~vp~~~ 88 (328)
T 1zyl_A 11 LHPDTIMDALFEHGIRVDSGLTPLN-SYENRVYQFQDEDRRRFVVKFYRPER-WTADQILEEHQFALQLVNDEVPVAAPV 88 (328)
T ss_dssp CCHHHHHHHHHHTTCCCCSCCEEEC-CSSSEEEEECCTTCCCEEEEEECTTT-SCHHHHHHHHHHHHHHHHTTCSBCCCC
T ss_pred CCHHHHHHHHHHcCCCCCceEEeec-CcccceEEEEcCCCCEEEEEEcCCCC-CCHHHHHHHHHHHHHHHHcCCeeccee
Confidence 344444444443432 23466 88889999877677789999986432 23456677888777774222 34444
Q ss_pred ee-----eccCCeEEEEEeecCCCCHH-----HH---------Hhh----CC---CCCCCHHHH----HHH---------
Q 045553 864 GY-----HVSEAEMFLIYNYLPGGNLE-----KF---------IQD----RP---RRTVEWSML----HKI--------- 904 (1082)
Q Consensus 864 ~~-----~~~~~~~~lV~E~~~~gsL~-----~~---------l~~----~~---~~~l~~~~~----~~i--------- 904 (1082)
.. ....+..++||||++|..+. .+ +|. .. ....++... ..+
T Consensus 89 ~~~g~~~~~~~g~~~~l~~~i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 168 (328)
T 1zyl_A 89 AFNGQTLLNHQGFYFAVFPSVGGRQFEADNIDQMEAVGRYLGRMHQTGRKQLFIHRPTIGLNEYLIEPRKLFEDATLIPS 168 (328)
T ss_dssp CBTTBSCEEETTEEEEEEECCCCEECCSSCHHHHHHHHHHHHHHHHHHTSSCCSSSCBCSHHHHTHHHHHHHHTCSSSCT
T ss_pred ecCCcEEEEECCEEEEEEEecCCCCCCCCCHHHHHHHHHHHHHHHHhhccCCCccCCCCCHHHHHhhHHHHHhhcCcCCH
Confidence 43 11245668899999875432 11 111 10 111222211 001
Q ss_pred ------HHHHHHHHHHHhhC----CCCCeEeccCCCCCEEEcCCCcEEEeeccccee
Q 045553 905 ------ALDVARALAYLHDE----CVPRVLHRDIKPSNILLDNNLNAYLSDFGLARL 951 (1082)
Q Consensus 905 ------~~~i~~~L~~LH~~----~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~ 951 (1082)
...+...++.+... ..+.++|||+++.||+++ + .+.|+||+.+..
T Consensus 169 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~HgD~~~~Nil~~-~-~~~lIDfe~a~~ 223 (328)
T 1zyl_A 169 GLKAAFLKATDELIAAVTAHWREDFTVLRLHGDCHAGNILWR-D-GPMFVDLDDARN 223 (328)
T ss_dssp TTHHHHHHHHHHHHHHHHHHCCSCSCCEECCSSCSGGGEEES-S-SEEECCCTTCCE
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhcCCeeeeeCCCCcccEeEc-C-CCEEEECCCCCc
Confidence 01111222333221 234688999999999999 4 899999998754
No 439
>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}
Probab=96.61 E-value=0.0058 Score=70.56 Aligned_cols=73 Identities=11% Similarity=0.060 Sum_probs=47.2
Q ss_pred ceecccCceEEEEEEEcC-CeEEEEEEeecCccccHHHHHHHHHHHhccCCCce-eeEeeeeccCCeEEEEEeecCCCCH
Q 045553 807 NCIGSGGFGATYKAEIIP-GVVVAVKRLSVGRFQGVQQFAAEIRTLGRVQHPNL-VTLIGYHVSEAEMFLIYNYLPGGNL 884 (1082)
Q Consensus 807 ~~lg~G~~g~Vy~a~~~~-~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~ni-v~l~~~~~~~~~~~lV~E~~~~gsL 884 (1082)
+.|+.|-...+|+....+ +..+++|+....... .-...+|..+++.+...++ .++++++.. .+||||++|.++
T Consensus 114 ~~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~~~~-~idR~~E~~vl~~L~~~gl~P~ll~~~~~----G~v~e~I~G~~l 188 (458)
T 2qg7_A 114 QIINGGITNILIKVKDMSKQAKYLIRLYGPKTDE-IINREREKKISCILYNKNIAKKIYVFFTN----GRIEEFMDGYAL 188 (458)
T ss_dssp EEECC--CEEEEEEEETTTTEEEEEEEECC-CCS-CSCHHHHHHHHHHHTTSSSBCCEEEEETT----EEEEECCCSEEC
T ss_pred EEcCCCeEeEEEEEEECCCCceEEEEECCCChhh-hcCHHHHHHHHHHHHhcCCCCCEEEEeCC----eEEEEeeCCccC
Confidence 568888899999998765 478889987433211 1112578888888865554 467776632 259999987544
No 440
>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}
Probab=96.61 E-value=0.0033 Score=68.59 Aligned_cols=137 Identities=13% Similarity=0.104 Sum_probs=74.7
Q ss_pred cceecccCceEEEEEEEcCCeEEEEEEeecCccccHHHHHHHHHHHhccCCCce-eeEeeeeccCCeEEEEEeec-CCCC
Q 045553 806 QNCIGSGGFGATYKAEIIPGVVVAVKRLSVGRFQGVQQFAAEIRTLGRVQHPNL-VTLIGYHVSEAEMFLIYNYL-PGGN 883 (1082)
Q Consensus 806 ~~~lg~G~~g~Vy~a~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~ni-v~l~~~~~~~~~~~lV~E~~-~~gs 883 (1082)
.+.|+.|....+|+. ..+++|+....... .....+|+.+++.+...++ .+++++. .+.-++|+||+ ++.+
T Consensus 23 i~~l~gG~tN~~~~~-----~~~vlR~~~~~~~~-~~~r~~E~~~l~~l~~~g~~P~~~~~~--~~~~~~v~e~i~~g~~ 94 (301)
T 3dxq_A 23 PLERLGGLTNLVFRA-----GDLCLRIPGKGTEE-YINRANEAVAAREAAKAGVSPEVLHVD--PATGVMVTRYIAGAQT 94 (301)
T ss_dssp CEEEESCSSEEEEEE-----TTEEEEEECC-----CCCHHHHHHHHHHHHHTTSSCCEEEEC--TTTCCEEEECCTTCEE
T ss_pred eeEcCCcccccccee-----eeEEEECCCCCccc-eeCHHHHHHHHHHHHHcCCCCceEEEE--CCCCEEEEeecCCCcc
Confidence 577889999999998 56788887543211 1122457777766643223 4555544 33457899999 6554
Q ss_pred HHHH------------------HhhCCC---CCCC-HHHHHHHHHH--------------HHHHHH----HHhh-CCCCC
Q 045553 884 LEKF------------------IQDRPR---RTVE-WSMLHKIALD--------------VARALA----YLHD-ECVPR 922 (1082)
Q Consensus 884 L~~~------------------l~~~~~---~~l~-~~~~~~i~~~--------------i~~~L~----~LH~-~~~~~ 922 (1082)
+... +|..+. .... +..+..+... +.+.+. .+.. ...+.
T Consensus 95 l~~~~~~~~~~~~~~~~~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~~~~ 174 (301)
T 3dxq_A 95 MSPEKFKTRPGSPARAGEAFRKLHGSGAVFPFRFELFAMIDDYLKVLSTKNVTLPAGYHDVVREAGGVRSALAAHPLPLA 174 (301)
T ss_dssp CCHHHHHHSTTHHHHHHHHHHHHHTSCCCCSSBCCHHHHHHHHHHHHC--CCCCCTTHHHHHHHHHHHHHHHHSSCCCCE
T ss_pred CCHhhHhhhHHHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHhhcCCCchhhHHHHHHHHHHHHHHHHhcCCCce
Confidence 4210 111110 0011 1111111110 111111 1111 12346
Q ss_pred eEeccCCCCCEEEcCCCcEEEeeccccee
Q 045553 923 VLHRDIKPSNILLDNNLNAYLSDFGLARL 951 (1082)
Q Consensus 923 ivH~Dlk~~Nill~~~~~~kl~DfGla~~ 951 (1082)
++|+|+.+.||+ ..++.+.++||+.+..
T Consensus 175 l~HgDl~~~Nil-~~~~~~~lID~e~a~~ 202 (301)
T 3dxq_A 175 ACHCDPLCENFL-DTGERMWIVDWEYSGM 202 (301)
T ss_dssp EECSCCCGGGEE-ECSSCEEECCCTTCEE
T ss_pred eeccCCCcCCEE-ECCCCEEEEecccccC
Confidence 899999999999 5667789999998865
No 441
>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*
Probab=96.36 E-value=0.0081 Score=67.44 Aligned_cols=140 Identities=16% Similarity=0.197 Sum_probs=83.8
Q ss_pred ceecccCceEEEEEEEc--------CCeEEEEEEeecCccccHHHHHHHHHHHhccCCCc-eeeEeeeeccCCeEEEEEe
Q 045553 807 NCIGSGGFGATYKAEII--------PGVVVAVKRLSVGRFQGVQQFAAEIRTLGRVQHPN-LVTLIGYHVSEAEMFLIYN 877 (1082)
Q Consensus 807 ~~lg~G~~g~Vy~a~~~--------~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~n-iv~l~~~~~~~~~~~lV~E 877 (1082)
+.+..|-...+|+.... +++.+++|+.... ......+.+|.++++.+.-.+ ..++++++.+ .+|||
T Consensus 56 ~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~~-~~~~~~~~rE~~vl~~L~~~gv~P~ll~~~~~----g~v~e 130 (379)
T 3feg_A 56 YPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGAI-LQGVDSLVLESVMFAILAERSLGPQLYGVFPE----GRLEQ 130 (379)
T ss_dssp EEC-----CCEEEEECCTTSCCCSSCCSEEEEEECC----CCHHHHHHHHHHHHHHHHTTSSCCEEEEETT----EEEEE
T ss_pred EEcCCcccccEEEEEeCCCccccCCCCCeEEEEECCCc-cchHHHHHHHHHHHHHHHhcCCCCeEEEEcCC----ccEEE
Confidence 45777888899998764 2478899986332 234556678999888774322 3566776654 29999
Q ss_pred ecCCCCHHHH-----------------HhhCC---CCCCC--HHHHHHHHHHHHH-------------------HHHHHh
Q 045553 878 YLPGGNLEKF-----------------IQDRP---RRTVE--WSMLHKIALDVAR-------------------ALAYLH 916 (1082)
Q Consensus 878 ~~~~gsL~~~-----------------l~~~~---~~~l~--~~~~~~i~~~i~~-------------------~L~~LH 916 (1082)
|++|..+..- +|... ..... |.++.++..++.. .+.+|.
T Consensus 131 ~i~G~~l~~~~l~~p~~~~~ia~~La~LH~~~~~~~~~~~~l~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~ 210 (379)
T 3feg_A 131 YIPSRPLKTQELREPVLSAAIATKMAQFHGMEMPFTKEPHWLFGTMERYLKQIQDLPPTGLPEMNLLEMYSLKDEMGNLR 210 (379)
T ss_dssp CCSEEECCGGGGGCHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSCCSCCHHHHTTHHHHHHHHH
T ss_pred EecCccCChhHhCCHHHHHHHHHHHHHHhCCCCCCCCCcccHHHHHHHHHHHHHhccCcccchhhhhhhHHHHHHHHHHH
Confidence 9987654310 12111 11222 4555555544422 223332
Q ss_pred ----hC-CCCCeEeccCCCCCEEEcCC----CcEEEeeccccee
Q 045553 917 ----DE-CVPRVLHRDIKPSNILLDNN----LNAYLSDFGLARL 951 (1082)
Q Consensus 917 ----~~-~~~~ivH~Dlk~~Nill~~~----~~~kl~DfGla~~ 951 (1082)
.. ....++|+|+.+.||+++.+ +.+.++||..+..
T Consensus 211 ~~L~~~~~~~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~~ 254 (379)
T 3feg_A 211 KLLESTPSPVVFCHNDIQEGNILLLSEPENADSLMLVDFEYSSY 254 (379)
T ss_dssp HHHHTSCCCEEEECSCCCGGGEEEESCC---CCEEECCCTTCEE
T ss_pred HHHhhcCCCcEEEcCCCCCCeEEEcCCCCccCcEEEEecccCCc
Confidence 21 23468999999999999876 7899999998864
No 442
>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A
Probab=96.36 E-value=0.018 Score=57.87 Aligned_cols=105 Identities=12% Similarity=0.100 Sum_probs=70.0
Q ss_pred CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCEEEcCCCcEEEeecccceecCCCCCcccc
Q 045553 882 GNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARLLGTSETHATT 961 (1082)
Q Consensus 882 gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~~~ 961 (1082)
-||.+.|..+ +.+++++++|.++.|.+.+|.-.-... .-..+=+.|..|++..+|.+...+ +.+.
T Consensus 33 vSL~eIL~~~-~~PlsEEqaWALc~Qc~~~L~~~~~~~--~~~~~i~~~~~i~l~~dG~V~f~~-~~s~----------- 97 (229)
T 2yle_A 33 LSLEEILRLY-NQPINEEQAWAVCYQCCGSLRAAARRR--QPRHRVRSAAQIRVWRDGAVTLAP-AADD----------- 97 (229)
T ss_dssp EEHHHHHHHH-TSCCCHHHHHHHHHHHHHHHHHHHHTT--CCCCCCCSGGGEEEETTSCEEECC-C--------------
T ss_pred ccHHHHHHHc-CCCcCHHHHHHHHHHHHHHHHhhhhcc--cCCceecCCcceEEecCCceeccc-cccc-----------
Confidence 3899999887 679999999999999999987762210 101233457889999999988763 1110
Q ss_pred CcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHhCCCCCC
Q 045553 962 DVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELISDKKALD 1004 (1082)
Q Consensus 962 ~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~elltg~~p~~ 1004 (1082)
.....+.|||... ...+.+.=|||+|+++|.-+--..|-+
T Consensus 98 --~~~~~~~~pe~~~-~~~te~~~IysLG~tLY~ALDygL~e~ 137 (229)
T 2yle_A 98 --AGEPPPVAGKLGY-SQCMETEVIESLGIIIYKALDYGLKEN 137 (229)
T ss_dssp -----------CCSS-SSSCHHHHHHHHHHHHHHHHTTTCCTT
T ss_pred --ccccCCCChhhcc-ccchHHHHHHHHHHHHHHHhhcCCCcc
Confidence 1123466888764 355788999999999999987666543
No 443
>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*
Probab=95.95 E-value=0.0088 Score=67.36 Aligned_cols=73 Identities=14% Similarity=0.017 Sum_probs=43.1
Q ss_pred ceecccCceEEEEEEEcC---------CeEEEEEEeecCccccHHHHHHHHHHHhccCCCc-eeeEeeeeccCCeEEEEE
Q 045553 807 NCIGSGGFGATYKAEIIP---------GVVVAVKRLSVGRFQGVQQFAAEIRTLGRVQHPN-LVTLIGYHVSEAEMFLIY 876 (1082)
Q Consensus 807 ~~lg~G~~g~Vy~a~~~~---------~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~n-iv~l~~~~~~~~~~~lV~ 876 (1082)
+.|+.|..-.+|+....+ +..+++|+...... .......|.++++.+...+ ..++++... -++||
T Consensus 39 ~~l~~G~~N~~y~v~~~~~~~~~~~~~~~~~vlRi~~~~~~-~~~~~~~E~~~l~~L~~~g~~P~~~~~~~----~~~v~ 113 (369)
T 3c5i_A 39 KQILSGLTNQLFEVGLKEETANNYNSIRTRVLFRIYGKHVD-ELYNTISEFEVYKTMSKYKIAPQLLNTFN----GGRIE 113 (369)
T ss_dssp EEC----CCEEEEEEECHHHHTTCTTSCCEEEEEECCTTGG-GTSCHHHHHHHHHHHHHTTSSCCEEEEET----TEEEE
T ss_pred EEeCCcccceEEEEEeCCCCcccccCCCceEEEEecCCCcc-ceecHHHHHHHHHHHHhcCCCCceEEecC----CcEEE
Confidence 457788888999997654 26888888754321 1112356777777764333 345665442 26899
Q ss_pred eecCCCCH
Q 045553 877 NYLPGGNL 884 (1082)
Q Consensus 877 E~~~~gsL 884 (1082)
||++|..+
T Consensus 114 e~i~G~~l 121 (369)
T 3c5i_A 114 EWLYGDPL 121 (369)
T ss_dssp ECCCSEEC
T ss_pred EEecCCcC
Confidence 99987543
No 444
>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*
Probab=95.80 E-value=0.056 Score=59.86 Aligned_cols=32 Identities=28% Similarity=0.434 Sum_probs=28.3
Q ss_pred CCeEeccCCCCCEEEcCCCcEEEeecccceec
Q 045553 921 PRVLHRDIKPSNILLDNNLNAYLSDFGLARLL 952 (1082)
Q Consensus 921 ~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~ 952 (1082)
..++|+|+.+.||+++.++.+.|+||+.+..-
T Consensus 206 ~~~~HgD~~~~N~l~~~~~~~~~iD~e~~~~~ 237 (339)
T 3i1a_A 206 YVLCHSDIHAGNVLVGNEESIYIIDWDEPMLA 237 (339)
T ss_dssp CEEECSCCCGGGEEECGGGCEEECCCSSCEEE
T ss_pred ceeEeCCCCcCCEEEeCCCeEEEEECCCCeeC
Confidence 47899999999999998888999999887653
No 445
>3f2s_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics consortium, SGC, hemicholinium-3, alternative splicing, cytoplasm; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 3g15_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=95.21 E-value=0.045 Score=61.61 Aligned_cols=141 Identities=16% Similarity=0.185 Sum_probs=82.3
Q ss_pred ceecccCceEEEEEEEcC--------CeEEEEEEeecCccc------------------cHHHHHHHHHHHhccCCC-ce
Q 045553 807 NCIGSGGFGATYKAEIIP--------GVVVAVKRLSVGRFQ------------------GVQQFAAEIRTLGRVQHP-NL 859 (1082)
Q Consensus 807 ~~lg~G~~g~Vy~a~~~~--------~~~vavK~~~~~~~~------------------~~~~~~~e~~~l~~l~h~-ni 859 (1082)
+.|..|-...+|+....+ +..|.+++.-..... ..+....|..+++.+... -.
T Consensus 58 ~~l~gGlTN~~~~v~~~~~~~~~~~~~~~~llRi~G~~te~~~~~~~~~~~idR~~~~~~~~~~~~E~~~l~~L~~~Gi~ 137 (401)
T 3f2s_A 58 SVIRGGLSNMLFQCSLPDTTATLGDEPRKVLLRLYGAILQMRSCNKEGSEQAQKENEFQGAEAMVLESVMFAILAERSLG 137 (401)
T ss_dssp EEEECSSEEEEEEEECCTTCCCSSSCCSEEEEEEEEC-----------------------CHHHHHHHHHHHHHHHTTSS
T ss_pred EEcCCCccCceEEEEeCCCcccccCCCccEEEEeCCCCcccccccccccchhhhhhhhccchhhHHHHHHHHHHHhcCCC
Confidence 456668888999987653 367888886432210 011223478887777533 34
Q ss_pred eeEeeeeccCCeEEEEEeecCCCCHHH--H---------------HhhCC---CCCCC--HHHHHHHHHHHH--------
Q 045553 860 VTLIGYHVSEAEMFLIYNYLPGGNLEK--F---------------IQDRP---RRTVE--WSMLHKIALDVA-------- 909 (1082)
Q Consensus 860 v~l~~~~~~~~~~~lV~E~~~~gsL~~--~---------------l~~~~---~~~l~--~~~~~~i~~~i~-------- 909 (1082)
.++++++..+ +|+||++|.+|.. + +|... ..... +..+.++..++.
T Consensus 138 Pkl~~~~~~G----~i~efI~G~~L~~~dl~~p~~~~~iA~~L~~LH~~~~~~~~~~~~l~~~i~~~~~~l~~~~~~~~~ 213 (401)
T 3f2s_A 138 PKLYGIFPQG----RLEQFIPSRRLDTEELSLPDISAEIAEKMATFHGMKMPFNKEPKWLFGTMEKYLKEVLRIKFTEES 213 (401)
T ss_dssp CCEEEEETTE----EEEECCCEEECCGGGGGSHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSHH
T ss_pred CeEEEEeCCC----eEEEecCCccCCHHHHhhHHHHHHHHHHHHHHhCCCCCCCCCcchHHHHHHHHHHHHHhccCcchh
Confidence 5677776532 8999998754421 1 11110 11222 334444443322
Q ss_pred --------------HHH----HHHhhC-CCCCeEeccCCCCCEEEcCC------CcEEEeeccccee
Q 045553 910 --------------RAL----AYLHDE-CVPRVLHRDIKPSNILLDNN------LNAYLSDFGLARL 951 (1082)
Q Consensus 910 --------------~~L----~~LH~~-~~~~ivH~Dlk~~Nill~~~------~~~kl~DfGla~~ 951 (1082)
..+ +++... ....++|+|+.+.||+++.+ +.+.++||..+..
T Consensus 214 ~~~~~~~~~~~~l~~e~~~l~~~l~~~~~~~v~~H~Dl~~~Nil~~~~~~~~~~~~~~lID~E~a~~ 280 (401)
T 3f2s_A 214 RIKKLHKLLSYNLPLELENLRSLLESTPSPVVFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSY 280 (401)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHTSCCCEEEECSCCCGGGEEEETTGGGCSSSCEEECCCTTCEE
T ss_pred hhhhhhhhhhHHHHHHHHHHHHHHhhcCCCeeEEeccCCcccEEEcCCcccCcccceEEEeeccCCc
Confidence 112 223222 23468899999999999887 7899999998854
No 446
>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}
Probab=93.49 E-value=0.21 Score=56.66 Aligned_cols=139 Identities=13% Similarity=0.149 Sum_probs=82.8
Q ss_pred ceecccCceEEEEEEEcC--------CeEEEEEEeecCccccHHHHHHHHHHHhccCCCc-eeeEeeeeccCCeEEEEEe
Q 045553 807 NCIGSGGFGATYKAEIIP--------GVVVAVKRLSVGRFQGVQQFAAEIRTLGRVQHPN-LVTLIGYHVSEAEMFLIYN 877 (1082)
Q Consensus 807 ~~lg~G~~g~Vy~a~~~~--------~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~n-iv~l~~~~~~~~~~~lV~E 877 (1082)
+.+..|-...+|+....+ +..+++|+..... ...-...+|.++++.+...+ ..++++.+. -++|||
T Consensus 76 ~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlRi~g~~t-~~~idR~~E~~~l~~L~~~gi~P~l~~~~~----~~~I~e 150 (424)
T 3mes_A 76 KQIFSGLTNQLFVVSIVNESMSLSLKHPRILFRIYGKHV-GKFYDSKVELDVFRYLSNINIAPNIIADFP----EGRIEE 150 (424)
T ss_dssp EEECCCSSSEEEEEEECCC-----CCCSEEEEEECCCCC--CCCCHHHHHHHHHHHHHTTSSCCEEEEET----TEEEEE
T ss_pred EEcCCCcccceEEEEeCCCcccccCCCCeEEEEECCCCc-chhcCHHHHHHHHHHHHhcCCCCCEEEEcC----CCEEEE
Confidence 457778889999997753 5788999865432 11112356777777774322 345555432 278999
Q ss_pred ecCCCCHHH-------H----------HhhC-------C----CCCCCHHHHHHHHHHH-------------------HH
Q 045553 878 YLPGGNLEK-------F----------IQDR-------P----RRTVEWSMLHKIALDV-------------------AR 910 (1082)
Q Consensus 878 ~~~~gsL~~-------~----------l~~~-------~----~~~l~~~~~~~i~~~i-------------------~~ 910 (1082)
|++|..+.. . +|.. + ....-|.++.++..++ ..
T Consensus 151 fI~G~~l~~~~l~~~~~~~~ia~~La~LH~~~~~~~~L~~~~~~~p~~~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~~ 230 (424)
T 3mes_A 151 FIDGEPLTTKQLQLTHICVEVAKNMGSLHIINSKRADFPSRFDKEPILFKRIYLWREEAKIQVSKNNFQIDKELYSKILE 230 (424)
T ss_dssp CCCSEECCTGGGGSHHHHHHHHHHHHHHHTHHHHCTTSCTTSCCSCCHHHHHHHHHHHHHHHHHTCC--CCHHHHHHHHH
T ss_pred EeCCccCChhhcCCHHHHHHHHHHHHHHhcCchhhccCccccCCCCcHHHHHHHHHHHHHHhhcccchhhccccHHHHHH
Confidence 998865321 0 1110 0 1111244444443322 22
Q ss_pred HHHHHhh---------------------CCCCCeEeccCCCCCEEEcCCCcEEEeeccccee
Q 045553 911 ALAYLHD---------------------ECVPRVLHRDIKPSNILLDNNLNAYLSDFGLARL 951 (1082)
Q Consensus 911 ~L~~LH~---------------------~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~ 951 (1082)
.+.+|.. .....++|+|+.+.||+ +.++.+.++||..+..
T Consensus 231 e~~~L~~~l~~~~~~~~~r~~~~~~~~~~~~~~~~H~D~~~~N~l-~~~~~~~~IDwe~a~~ 291 (424)
T 3mes_A 231 EIDQLEELIMGGEKFSMERALELKLYSPAFSLVFAHNDLQENNLL-QTQNNIRMIDYEYSAI 291 (424)
T ss_dssp HHHHHHHHHHTSSCCCHHHHHHHHTTCGGGCEEEECSCCCGGGEE-ECSSCEEECCCTTCEE
T ss_pred HHHHHHHHHhhhcccccccccccccccCCCCceEECCCCCcccee-cCCCcEEEEecccCCc
Confidence 2333321 11236899999999999 8888999999998864
No 447
>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=88.00 E-value=0.91 Score=51.24 Aligned_cols=30 Identities=30% Similarity=0.420 Sum_probs=25.3
Q ss_pred CeEeccCCCCCEEE------cCCCcEEEeeccccee
Q 045553 922 RVLHRDIKPSNILL------DNNLNAYLSDFGLARL 951 (1082)
Q Consensus 922 ~ivH~Dlk~~Nill------~~~~~~kl~DfGla~~ 951 (1082)
.++|+|+.+.||++ +++..++++||..|..
T Consensus 245 vfcHnDl~~gNil~~~~~~~~~~~~l~vIDwEya~~ 280 (401)
T 3g15_A 245 VFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSY 280 (401)
T ss_dssp EEECSCCCGGGEEEETTGGGCSSCCEEECCCTTCEE
T ss_pred eeEEecCCCCeEEEecCcccCcCCeEEEechHhccC
Confidence 35799999999999 4567799999998864
No 448
>2k1k_A Ephrin type-A receptor 1; EPHA1, receptor tyrosine kinase, dimeric transmembrane domain, ATP-binding, glycoprotein, nucleotide-binding; NMR {Homo sapiens} PDB: 2k1l_A
Probab=84.06 E-value=1.2 Score=31.01 Aligned_cols=31 Identities=19% Similarity=0.270 Sum_probs=18.1
Q ss_pred CCCCchhhhHHHHHHHHHHHHHHHHHhhhhc
Q 045553 734 GLNPIEIASITSAAVILSVLIALVLLLICMK 764 (1082)
Q Consensus 734 ~~~~~~i~~i~~~~~~~~~l~~l~~~~~~~r 764 (1082)
+.+...++.++.++++.+.+++.+.+++++|
T Consensus 7 ~ls~GaIAGiVvG~v~gv~li~~l~~~~~rr 37 (38)
T 2k1k_A 7 GLTGGEIVAVIFGLLLGAALLLGILVFRSRR 37 (38)
T ss_dssp TCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_pred CCCCCceeeeehHHHHHHHHHHHHHHHHeec
Confidence 3445566666666666666555555555544
No 449
>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}
Probab=82.77 E-value=2 Score=30.83 Aligned_cols=30 Identities=17% Similarity=0.175 Sum_probs=14.2
Q ss_pred chhhhHHHHHHHHHHHHHHHHHhhhhcccC
Q 045553 738 IEIASITSAAVILSVLIALVLLLICMKKFS 767 (1082)
Q Consensus 738 ~~i~~i~~~~~~~~~l~~l~~~~~~~rk~~ 767 (1082)
..|+..+.+.+++++++++++++++++|+.
T Consensus 10 ~aIA~gVVgGv~~v~ii~~~~~~~~RRRr~ 39 (44)
T 2l2t_A 10 PLIAAGVIGGLFILVIVGLTFAVYVRRKSI 39 (44)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTTCS
T ss_pred ceEEEeehHHHHHHHHHHHHHHHHhhhhhh
Confidence 345444444444444445555555554433
No 450
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=79.07 E-value=2.5 Score=30.34 Aligned_cols=28 Identities=25% Similarity=0.326 Sum_probs=13.0
Q ss_pred hhhhHHHHHHHHHHHHHHHHHhhhhccc
Q 045553 739 EIASITSAAVILSVLIALVLLLICMKKF 766 (1082)
Q Consensus 739 ~i~~i~~~~~~~~~l~~l~~~~~~~rk~ 766 (1082)
.|+..+.+.+++++++++++++++++|+
T Consensus 12 ~IA~gVVgGv~~~~ii~~~~~~~~RRr~ 39 (44)
T 2ks1_B 12 SIATGMVGALLLLLVVALGIGLFMRRRH 39 (44)
T ss_dssp SSTHHHHHHHHHHHHHHHHHHHHHHTTT
T ss_pred eEEeehhHHHHHHHHHHHHHHHHhhhhH
Confidence 3444444444444444455455544443
No 451
>4ann_A ESSB; membrane protein, membrane secretion, ESS type VII secretion virulence; 1.05A {Staphylococcus aureus subsp}
Probab=74.57 E-value=8.5 Score=38.57 Aligned_cols=115 Identities=10% Similarity=0.189 Sum_probs=79.0
Q ss_pred CCCceeeEeeeeccCCeEEEEEeecCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCE
Q 045553 855 QHPNLVTLIGYHVSEAEMFLIYNYLPG-GNLEKFIQDRPRRTVEWSMLHKIALDVARALAYLHDECVPRVLHRDIKPSNI 933 (1082)
Q Consensus 855 ~h~niv~l~~~~~~~~~~~lV~E~~~~-gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Ni 933 (1082)
.||++++. .+-.+++.+.+.|+.-+. .++.. + ...+...+++++.+|+....+++.. +|=-+.|+|+
T Consensus 43 ~~~~Fl~~-~I~e~eD~v~~~y~~~~~~~~f~~-i-----k~~~~~eKlr~l~ni~~l~~~~~~r-----~tf~L~P~NL 110 (215)
T 4ann_A 43 HSPYFIDA-ELTELRDSFQIHYDINDNHTPFDN-I-----KSFTKNEKLRYLLNIKNLEEVNRTR-----YTFVLAPDEL 110 (215)
T ss_dssp CCTTBCCE-EEEECSSEEEEEECCCTTSEEGGG-G-----GGSCHHHHHHHHHHGGGGGGGGGSS-----EECCCSGGGE
T ss_pred cCCcccce-EEEEcccEEEEEEEcCcccCCHHH-H-----HhcCHHHHHHHHHHHHHHHHHhcCc-----eEEEEecceE
Confidence 57888866 455566677776765432 23333 2 2478889999999999888666554 6778999999
Q ss_pred EEcCCCcEEEeecccceecCCCCCccccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHhCCCCCC
Q 045553 934 LLDNNLNAYLSDFGLARLLGTSETHATTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELISDKKALD 1004 (1082)
Q Consensus 934 ll~~~~~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~elltg~~p~~ 1004 (1082)
+++.++.+++.-.|+...+ +|. ..++..=.-.+=+++..+++++..|+
T Consensus 111 ~f~~~~~p~i~~RGik~~l------------------~P~-----~~~ee~fL~qyKAliiall~~K~~Fe 158 (215)
T 4ann_A 111 FFTRDGLPIAKTRGLQNVV------------------DPL-----PVSEAEFLTRYKALVICAFNEKQSFD 158 (215)
T ss_dssp EECTTSCEEESCCEETTTB------------------SCC-----CCCHHHHHHHHHHHHHHHHCTTCCHH
T ss_pred EEcCCCCEEEEEccCccCC------------------CCC-----CCCHHHHHHHHHHHHHHHHcCCCCHH
Confidence 9999999999876654322 222 11222233458888899999988875
No 452
>4ano_A ESSB; membrane protein, membrane secretion, ESS type V secretion S; HET: MSE; 1.70A {Geobacillus thermodenitrificans ng80-2organism_taxid}
Probab=64.73 E-value=16 Score=36.80 Aligned_cols=114 Identities=15% Similarity=0.216 Sum_probs=76.8
Q ss_pred CCCceeeEeeeeccCCeEEEEEeecCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHH-HHhhCCCCCeEeccCCCCC
Q 045553 855 QHPNLVTLIGYHVSEAEMFLIYNYLPGG-NLEKFIQDRPRRTVEWSMLHKIALDVARALA-YLHDECVPRVLHRDIKPSN 932 (1082)
Q Consensus 855 ~h~niv~l~~~~~~~~~~~lV~E~~~~g-sL~~~l~~~~~~~l~~~~~~~i~~~i~~~L~-~LH~~~~~~ivH~Dlk~~N 932 (1082)
.||.+ -..+-.+++.+.+.|+.-+++ ++.. ++ ..+...+++++.+|+.... +++.. +|=-+.|+|
T Consensus 48 ~~~~f--~~~I~~~eD~~~i~y~~~~~~~~f~~-i~-----~~~~~eKlrll~nl~~L~~~~~~~r-----~tf~l~P~N 114 (219)
T 4ano_A 48 VDPCI--VRDIDVSEDEVKVVIKPPSSFLTFAA-IR-----KTTLLSRIRAAIHLVSKVKHHSARR-----LIFIVCPEN 114 (219)
T ss_dssp SCSSS--EEEEEECSSEEEEEEECCTTCEEHHH-HH-----TSCHHHHHHHHHHHHHHHSSCCSSS-----EECCCCGGG
T ss_pred cCCCC--CeEEEEeCCEEEEEEEcCcccCcHHH-HH-----hcCHHHHHHHHHHHHHHHHHhhhCc-----eeEEEeCce
Confidence 57777 344446777888878765333 4443 33 4788899999999988766 55543 667799999
Q ss_pred EEEcCCCcEEEeecccceecCCCCCccccCcccCCCcccchhcccCCCCchhhHHHHHHHHHHHHhCCCCCC
Q 045553 933 ILLDNNLNAYLSDFGLARLLGTSETHATTDVAGTFGYVAPEYAMTCRVSDKADVYSFGVVLLELISDKKALD 1004 (1082)
Q Consensus 933 ill~~~~~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGvll~elltg~~p~~ 1004 (1082)
+++|.++.++|.-.|.-.. ++|.- .++..=.-.+=+++..++.++..|+
T Consensus 115 L~f~~~~~p~i~hRGi~~~------------------lpP~e-----~~ee~fl~qyKali~all~~K~~Fe 163 (219)
T 4ano_A 115 LMFNRALEPFFLHVGVKES------------------LPPDE-----WDDERLLREVKATVLALTEGEYRFD 163 (219)
T ss_dssp EEECTTCCEEESCCEETTT------------------BSSCS-----CCHHHHHHHHHHHHHHHTTCSSCHH
T ss_pred EEEeCCCcEEEEEcCCccc------------------CCCCC-----CCHHHHHHHHHHHHHHHHcCCCCHH
Confidence 9999999999987665432 22321 1222223357788888888877664
No 453
>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A
Probab=64.63 E-value=0.74 Score=53.00 Aligned_cols=59 Identities=7% Similarity=0.093 Sum_probs=16.7
Q ss_pred ccceecccCceEEEEEEEcC-CeEEEE------EEeecCc--cccHHHHHHHHHHHhccCCCceeeEeeee
Q 045553 805 VQNCIGSGGFGATYKAEIIP-GVVVAV------KRLSVGR--FQGVQQFAAEIRTLGRVQHPNLVTLIGYH 866 (1082)
Q Consensus 805 ~~~~lg~G~~g~Vy~a~~~~-~~~vav------K~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~ 866 (1082)
+.+.|| ||.||+|.+.. ..+||| |..+... .+....|.+|..+++..+|||+++.+++.
T Consensus 146 l~~~lG---fG~v~~g~~~~~~~~Vav~~~~~~K~~~~~~~~~e~~~~~~rea~l~~~~~H~niv~~h~f~ 213 (463)
T 3cxl_A 146 IYEHVG---YTTLNREPAYKKHMPVLKETHDERDSTGQDGVSEKRLTSLVRRATLKENEQIPKYEKIHNFK 213 (463)
T ss_dssp STTTSS---BCCC---------CCBGGGC-----------------------------------CBCCCEE
T ss_pred ccccCC---chhhhcccccccCCchhhhhccCccccccccccccccccccccccccccccccccCCCcceE
Confidence 445676 99999998764 367888 6654322 23345688899999999999999987754
No 454
>2jwa_A Receptor tyrosine-protein kinase ERBB-2; transmembrane helix dimer, protein kinase receptor membrane domain, ATP-binding, glycoprotein; NMR {Homo sapiens} PDB: 2ks1_A
Probab=63.29 E-value=7.8 Score=27.76 Aligned_cols=25 Identities=20% Similarity=0.438 Sum_probs=10.9
Q ss_pred hhhHHHHHHHHHHHHHHHHHhhhhcc
Q 045553 740 IASITSAAVILSVLIALVLLLICMKK 765 (1082)
Q Consensus 740 i~~i~~~~~~~~~l~~l~~~~~~~rk 765 (1082)
++.++.+ ++++++++++++++.+||
T Consensus 14 Ia~~vVG-vll~vi~~l~~~~~~RRR 38 (44)
T 2jwa_A 14 IISAVVG-ILLVVVLGVVFGILIKRR 38 (44)
T ss_dssp HHHHHHH-HHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHH-HHHHHHHHHHHHhheehh
Confidence 3344444 334444444444444444
No 455
>1cja_A Protein (actin-fragmin kinase); transferase; HET: AMP; 2.90A {Physarum polycephalum} SCOP: d.144.1.3
Probab=46.47 E-value=50 Score=35.33 Aligned_cols=139 Identities=14% Similarity=0.103 Sum_probs=71.8
Q ss_pred cccceecccCceEEEEEEEcCCeEEEEEEeecCccccHHHHHHHHHHHhccCCCceeeEeee------------------
Q 045553 804 NVQNCIGSGGFGATYKAEIIPGVVVAVKRLSVGRFQGVQQFAAEIRTLGRVQHPNLVTLIGY------------------ 865 (1082)
Q Consensus 804 ~~~~~lg~G~~g~Vy~a~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~------------------ 865 (1082)
...+..-.|. +.||.+.. ++..|+||-. . ....+.+-.++...=.+.-|+..-+.-.
T Consensus 72 ~~I~~s~~Gs-tgvff~~t-d~~~~VVK~s--~-~l~~E~l~s~LA~~LGlpiP~~Riv~~~~~E~~e~~~~L~~~~~~~ 146 (342)
T 1cja_A 72 KGIERSEKGT-EGLFFVET-ESGVFIVKRS--T-NIESETFCSLLCMRLGLHAPKVRVVSSNSEEGTNMLECLAAIDKSF 146 (342)
T ss_dssp EEEEECCSTT-SCEEEEEE-SSCEEEEECC--T-THHHHHHHHHHHHHHTCCCCCEEEEESSSHHHHHHHHHHHHHCSSS
T ss_pred eEEEeccCCC-CCeEEEEe-CCCEEEEeCc--H-HHHHHHHHHHHHHHhCCCCCCeeEEeeCcHHHHHHHHHHHHhhhhh
Confidence 3344445555 55665555 5788999943 1 2233344445544444555553322211
Q ss_pred ----eccCCeEEEEEeecCCCCHHHHHhhCCCCCCCHHHHHHHHHHH--HHHHHHHhhCCCCC--eEeccCCCCCEEEcC
Q 045553 866 ----HVSEAEMFLIYNYLPGGNLEKFIQDRPRRTVEWSMLHKIALDV--ARALAYLHDECVPR--VLHRDIKPSNILLDN 937 (1082)
Q Consensus 866 ----~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i--~~~L~~LH~~~~~~--ivH~Dlk~~Nill~~ 937 (1082)
........++|||++|..|.+.-+..-...+..+. +.++ +-++.+...+..+- +.+.--.+.|||++.
T Consensus 147 ~~l~~l~~~~~~l~meyv~G~~L~e~~~~~~~~~f~~~~----~k~LG~Ii~FDi~InN~DR~Pl~W~n~GN~~NIL~~~ 222 (342)
T 1cja_A 147 RVITTLANQANILLMELVRGITLNKLTTTSAPEVLTKST----MQQLGSLMALDVIVNNSDRLPIAWTNEGNLDNIMLSE 222 (342)
T ss_dssp CHHHHHTTCSEEEEEECCCEEESTTCCSSSHHHHSCHHH----HHHHHHHHHHHHHHTCCSSSCSSSCSCCCGGGEEEES
T ss_pred HHHHHhhcccceehhhhcCCCccccchhhhhhhhcCHHH----HHhhchhheehhhhcCCccCcccccCCCChhheEEeC
Confidence 00122467999999876665432211001122222 2332 23455555443221 111225788999987
Q ss_pred CCc-EEEeeccccee
Q 045553 938 NLN-AYLSDFGLARL 951 (1082)
Q Consensus 938 ~~~-~kl~DfGla~~ 951 (1082)
++. +.++|-+.+..
T Consensus 223 ~n~~~~~IDhn~af~ 237 (342)
T 1cja_A 223 RGATVVPIDSKIIPL 237 (342)
T ss_dssp BTTCEEECSCCCCCC
T ss_pred CCCeEEEEcCCcccc
Confidence 554 89999998864
No 456
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=41.23 E-value=29 Score=29.98 Aligned_cols=44 Identities=18% Similarity=0.197 Sum_probs=20.8
Q ss_pred ccccCccccCCCCCCCEEEccCCCCCCCCcccccCCCCCCEEEcC
Q 045553 555 FVGLIPQSFTNFDSLRNLNLSRNHLQGPLPSYINKMEDLKFLSLS 599 (1082)
Q Consensus 555 i~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls 599 (1082)
++.+...+|.++++|+.+.+..+- +.+-..+|.++.+|+.+.+.
T Consensus 8 vt~I~~~aF~~c~~L~~i~iP~~v-~~Ig~~aF~~C~~L~~i~~~ 51 (100)
T 2lz0_A 8 VVGMDKSLFAGNTVIREITVQPNI-GLLYDGMFSGCTALEKLILT 51 (100)
T ss_dssp CCSSCSCTTTTCTTCCCEEECTTS-SCCCTTSSTTCTTCCCEEEC
T ss_pred cCEecHHHhcCCCCCcEEEcCCch-heEcHHHHhccCCccEEEEc
Confidence 334444455555555555554442 22444445555555555443
No 457
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=40.32 E-value=39 Score=29.16 Aligned_cols=45 Identities=13% Similarity=0.153 Sum_probs=39.4
Q ss_pred cCCccccccCCcccEEEccCCcccccCccccCCCCCCCEEEccCCC
Q 045553 533 EVPSDMGSHCKCMKFLSMAGNEFVGLIPQSFTNFDSLRNLNLSRNH 578 (1082)
Q Consensus 533 ~ip~~~~~~~~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~ 578 (1082)
.|.+..|.++++|+.+.+..+ ++.+-..+|.++.+|+.+.+....
T Consensus 10 ~I~~~aF~~c~~L~~i~iP~~-v~~Ig~~aF~~C~~L~~i~~~~~~ 54 (100)
T 2lz0_A 10 GMDKSLFAGNTVIREITVQPN-IGLLYDGMFSGCTALEKLILTGED 54 (100)
T ss_dssp SSCSCTTTTCTTCCCEEECTT-SSCCCTTSSTTCTTCCCEEECCSC
T ss_pred EecHHHhcCCCCCcEEEcCCc-hheEcHHHHhccCCccEEEEcCCC
Confidence 788999999999999999975 666888899999999999997653
Done!