BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>045554
MAITSILNSNRLLLSKRTVNCFDGNLLRYNVIKSLSFRPVIPDPGPKLSSLQAKTFLMNP
TTPILTSSSEANSRTPSNRDLKVQQSVGVMMGGRSFPLIFTNPNQNPNPNRLQVSIGAAL
FFVLVGLFLFLLSSGQIAGLQQKVLDLSHLLTETTKSLFLGHDTQRWISDYSPVTMSMSM
LLAGPKRIKFPKQHRGRMTGKASRGNLICFGRYALQALEPAWITARQIEAGRRAMVRNVK
RGGKIWVRIFPDKPVTARPAETRMGSGKGSHAYWAAVVTPGKIIFEMSGVPENIARKAIS
IAASKMPIKTQFVMSGTSTSKDE

High Scoring Gene Products

Symbol, full name Information P value
rpl16
50S ribosomal protein L16, chloroplastic
protein from Oryza sativa 2.3e-46
rpl16
50S ribosomal protein L16, chloroplastic
protein from Oryza sativa Japonica Group 2.3e-46
rpl16
50S ribosomal protein L16, chloroplastic
protein from Oryza sativa Indica Group 3.0e-46
rpl16
50S ribosomal protein L16, chloroplastic
protein from Oryza nivara 3.0e-46
DET_0481
ribosomal protein L16
protein from Dehalococcoides ethenogenes 195 4.4e-36
CHY_2302
ribosomal protein L16
protein from Carboxydothermus hydrogenoformans Z-2901 7.2e-36
BA_0117
ribosomal protein L16
protein from Bacillus anthracis str. Ames 4.0e-35
GSU_2850
ribosomal protein L16
protein from Geobacter sulfurreducens PCA 8.3e-35
rplP
50S ribosomal subunit protein L16
protein from Escherichia coli K-12 1.1e-32
SPO_0488
ribosomal protein L16
protein from Ruegeria pomeroyi DSS-3 1.4e-32
CPS_0866
ribosomal protein L16
protein from Colwellia psychrerythraea 34H 2.0e-31
CBU_0245
ribosomal protein L16
protein from Coxiella burnetii RSA 493 6.9e-31
rplP
50S ribosomal protein L16
protein from Mycobacterium tuberculosis 8.8e-31
SO_0238
ribosomal protein L16
protein from Shewanella oneidensis MR-1 1.1e-30
rplP
50S ribosomal protein L16
protein from Vibrio cholerae O1 biovar El Tor str. N16961 1.8e-30
VC_2589
ribosomal protein L16
protein from Vibrio cholerae O1 biovar El Tor 1.8e-30
CJE_1868
ribosomal protein L16
protein from Campylobacter jejuni RM1221 2.1e-29
ECH_0416
ribosomal protein L16
protein from Ehrlichia chaffeensis str. Arkansas 1.9e-26
APH_0287
ribosomal protein L16
protein from Anaplasma phagocytophilum HZ 2.2e-25
NSE_0273
ribosomal protein L16
protein from Neorickettsia sennetsu str. Miyayama 2.1e-22
RPL16
60S ribosomal protein L16, mitochondrial
protein from Oryza sativa Japonica Group 3.7e-16
rpl16
Ribosomal protein L16
protein from Oryza sativa Japonica Group 3.7e-16
rpl16
Ribosomal protein large subunit 16
protein from Oryza sativa Indica Group 3.7e-16
MRPL16
Mitochondrial ribosomal protein of the large subunit
gene from Saccharomyces cerevisiae 4.8e-10
mrpl16
ribosomal protein L16
gene from Dictyostelium discoideum 8.7e-09
orf19.2019 gene_product from Candida albicans 1.3e-07

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  045554
        (323 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

UNIPROTKB|P0C441 - symbol:rpl16 "50S ribosomal protein L1...   486  2.3e-46   1
UNIPROTKB|P0C443 - symbol:rpl16 "50S ribosomal protein L1...   486  2.3e-46   1
UNIPROTKB|P0C442 - symbol:rpl16 "50S ribosomal protein L1...   485  3.0e-46   1
UNIPROTKB|Q6END6 - symbol:rpl16 "50S ribosomal protein L1...   485  3.0e-46   1
TIGR_CMR|DET_0481 - symbol:DET_0481 "ribosomal protein L1...   389  4.4e-36   1
TIGR_CMR|CHY_2302 - symbol:CHY_2302 "ribosomal protein L1...   387  7.2e-36   1
TIGR_CMR|BA_0117 - symbol:BA_0117 "ribosomal protein L16"...   380  4.0e-35   1
TIGR_CMR|GSU_2850 - symbol:GSU_2850 "ribosomal protein L1...   377  8.3e-35   1
UNIPROTKB|P0ADY7 - symbol:rplP "50S ribosomal subunit pro...   357  1.1e-32   1
TIGR_CMR|SPO_0488 - symbol:SPO_0488 "ribosomal protein L1...   356  1.4e-32   1
TIGR_CMR|CPS_0866 - symbol:CPS_0866 "ribosomal protein L1...   345  2.0e-31   1
TIGR_CMR|CBU_0245 - symbol:CBU_0245 "ribosomal protein L1...   340  6.9e-31   1
UNIPROTKB|P95056 - symbol:rplP "50S ribosomal protein L16...   339  8.8e-31   1
TIGR_CMR|SO_0238 - symbol:SO_0238 "ribosomal protein L16"...   338  1.1e-30   1
UNIPROTKB|Q9KNZ1 - symbol:rplP "50S ribosomal protein L16...   336  1.8e-30   1
TIGR_CMR|VC_2589 - symbol:VC_2589 "ribosomal protein L16"...   336  1.8e-30   1
TIGR_CMR|CJE_1868 - symbol:CJE_1868 "ribosomal protein L1...   326  2.1e-29   1
TIGR_CMR|ECH_0416 - symbol:ECH_0416 "ribosomal protein L1...   298  1.9e-26   1
TIGR_CMR|APH_0287 - symbol:APH_0287 "ribosomal protein L1...   288  2.2e-25   1
TIGR_CMR|NSE_0273 - symbol:NSE_0273 "ribosomal protein L1...   260  2.1e-22   1
UNIPROTKB|P46801 - symbol:RPL16 "60S ribosomal protein L1...   201  3.7e-16   1
UNIPROTKB|Q2F932 - symbol:rpl16 "Os12g0524700 protein" sp...   201  3.7e-16   1
UNIPROTKB|Q2F985 - symbol:rpl16 "Ribosomal protein L16" s...   201  3.7e-16   1
SGD|S000000134 - symbol:MRPL16 "Mitochondrial ribosomal p...   158  4.8e-10   1
POMBASE|SPBC1105.03c - symbol:mrpl16 "mitochondrial ribos...   151  1.8e-09   1
DICTYBASE|DDB_G0294042 - symbol:mrpl16 "ribosomal protein...   136  8.7e-09   1
CGD|CAL0004340 - symbol:orf19.2019 species:5476 "Candida ...   138  1.3e-07   1
ASPGD|ASPL0000002472 - symbol:mrpA species:162425 "Emeric...   128  5.1e-06   1


>UNIPROTKB|P0C441 [details] [associations]
            symbol:rpl16 "50S ribosomal protein L16, chloroplastic"
            species:4530 "Oryza sativa" [GO:0009536 "plastid" evidence=IC]
            HAMAP:MF_01342 InterPro:IPR000114 InterPro:IPR016180
            InterPro:IPR020798 Pfam:PF00252 PRINTS:PR00060 PROSITE:PS00586
            PROSITE:PS00701 GO:GO:0009507 GO:GO:0009536 GO:GO:0006412
            GO:GO:0005840 EMBL:AY522331 GO:GO:0003735 GO:GO:0019843
            PANTHER:PTHR12220 SUPFAM:SSF54686 TIGRFAMs:TIGR01164
            ProteinModelPortal:P0C441 SMR:P0C441 Gramene:P0C441
            HOGENOM:HOG000164573 Genevestigator:P0C441 Uniprot:P0C441
        Length = 136

 Score = 486 (176.1 bits), Expect = 2.3e-46, P = 2.3e-46
 Identities = 90/132 (68%), Positives = 100/132 (75%)

Query:   182 LAGPKRIKFPKQHRGRMTGKASRGNLICFGRYALQALEPAWITARQIEAGRRAMVRNVKR 241
             +  PKR +F KQHRGRM GK+ RGN ICFGRYALQALEP WITARQIEAGRRAM R  +R
Sbjct:     1 MLSPKRTRFRKQHRGRMKGKSYRGNCICFGRYALQALEPTWITARQIEAGRRAMTRYARR 60

Query:   242 GGKIWVRIFPDKPVTARPAETRMGSGKGSHAYWAAVVTPGKIIFEMSGVPENXXXXXXXX 301
             GGKIWVRIFPDKPVT RP ETRMGSGKGS  YW AVV PG+I++EM GV E         
Sbjct:    61 GGKIWVRIFPDKPVTIRPTETRMGSGKGSPEYWVAVVKPGRILYEMGGVSETVARAAISI 120

Query:   302 XXXXMPIKTQFV 313
                 MPI++QF+
Sbjct:   121 AASKMPIRSQFL 132


>UNIPROTKB|P0C443 [details] [associations]
            symbol:rpl16 "50S ribosomal protein L16, chloroplastic"
            species:39947 "Oryza sativa Japonica Group" [GO:0009536 "plastid"
            evidence=IC] HAMAP:MF_01342 InterPro:IPR000114 InterPro:IPR016180
            InterPro:IPR020798 Pfam:PF00252 PRINTS:PR00060 PROSITE:PS00586
            PROSITE:PS00701 GO:GO:0009507 GO:GO:0009536 GO:GO:0006412
            GO:GO:0005840 EMBL:X15901 EMBL:AY522330 GenomeReviews:AY522330_GR
            GO:GO:0003735 GO:GO:0019843 ProtClustDB:CHL00044 PANTHER:PTHR12220
            SUPFAM:SSF54686 TIGRFAMs:TIGR01164 PIR:JQ0264 RefSeq:NP_039423.1
            ProteinModelPortal:P0C443 SMR:P0C443 STRING:P0C443
            EnsemblPlants:LOC_Os05g22724.1 GeneID:3131423 KEGG:osa:3131423
            Gramene:P0C443 eggNOG:COG0197 KO:K02878 OMA:GAPEYWV Uniprot:P0C443
        Length = 136

 Score = 486 (176.1 bits), Expect = 2.3e-46, P = 2.3e-46
 Identities = 90/132 (68%), Positives = 100/132 (75%)

Query:   182 LAGPKRIKFPKQHRGRMTGKASRGNLICFGRYALQALEPAWITARQIEAGRRAMVRNVKR 241
             +  PKR +F KQHRGRM GK+ RGN ICFGRYALQALEP WITARQIEAGRRAM R  +R
Sbjct:     1 MLSPKRTRFRKQHRGRMKGKSYRGNCICFGRYALQALEPTWITARQIEAGRRAMTRYARR 60

Query:   242 GGKIWVRIFPDKPVTARPAETRMGSGKGSHAYWAAVVTPGKIIFEMSGVPENXXXXXXXX 301
             GGKIWVRIFPDKPVT RP ETRMGSGKGS  YW AVV PG+I++EM GV E         
Sbjct:    61 GGKIWVRIFPDKPVTIRPTETRMGSGKGSPEYWVAVVKPGRILYEMGGVSETVARAAISI 120

Query:   302 XXXXMPIKTQFV 313
                 MPI++QF+
Sbjct:   121 AASKMPIRSQFL 132


>UNIPROTKB|P0C442 [details] [associations]
            symbol:rpl16 "50S ribosomal protein L16, chloroplastic"
            species:39946 "Oryza sativa Indica Group" [GO:0009536 "plastid"
            evidence=IC] HAMAP:MF_01342 InterPro:IPR000114 InterPro:IPR016180
            InterPro:IPR020798 Pfam:PF00252 PRINTS:PR00060 PROSITE:PS00586
            PROSITE:PS00701 GO:GO:0009507 GO:GO:0009536 GO:GO:0006412
            GO:GO:0005840 EMBL:AY522329 GO:GO:0003735 GO:GO:0019843
            ProtClustDB:CHL00044 PANTHER:PTHR12220 SUPFAM:SSF54686
            TIGRFAMs:TIGR01164 HOGENOM:HOG000164573 RefSeq:YP_654241.2
            ProteinModelPortal:P0C442 SMR:P0C442 GeneID:4126899 Gramene:P0C442
            Uniprot:P0C442
        Length = 136

 Score = 485 (175.8 bits), Expect = 3.0e-46, P = 3.0e-46
 Identities = 90/132 (68%), Positives = 100/132 (75%)

Query:   182 LAGPKRIKFPKQHRGRMTGKASRGNLICFGRYALQALEPAWITARQIEAGRRAMVRNVKR 241
             +  PKR +F KQHRGRM GK+ RGN ICFGRYALQALEP WITARQIEAGRRAM R  +R
Sbjct:     1 MLSPKRTRFRKQHRGRMKGKSYRGNCICFGRYALQALEPTWITARQIEAGRRAMTRYARR 60

Query:   242 GGKIWVRIFPDKPVTARPAETRMGSGKGSHAYWAAVVTPGKIIFEMSGVPENXXXXXXXX 301
             GGKIWVRIFPDKPVT RP ETRMGSGKGS  YW AVV PG+I++EM GV E         
Sbjct:    61 GGKIWVRIFPDKPVTIRPTETRMGSGKGSPEYWVAVVKPGRILYEMGGVSETVARVAISI 120

Query:   302 XXXXMPIKTQFV 313
                 MPI++QF+
Sbjct:   121 AASKMPIRSQFL 132


>UNIPROTKB|Q6END6 [details] [associations]
            symbol:rpl16 "50S ribosomal protein L16, chloroplastic"
            species:4536 "Oryza nivara" [GO:0009536 "plastid" evidence=IC]
            HAMAP:MF_01342 InterPro:IPR000114 InterPro:IPR016180
            InterPro:IPR020798 Pfam:PF00252 PRINTS:PR00060 PROSITE:PS00586
            PROSITE:PS00701 GO:GO:0009507 GO:GO:0009536 GO:GO:0006412
            GO:GO:0005840 GO:GO:0003735 GO:GO:0019843 EMBL:AP006728
            RefSeq:YP_052787.1 ProteinModelPortal:Q6END6 SMR:Q6END6
            GeneID:2885932 Gramene:Q6END6 ProtClustDB:CHL00044
            PANTHER:PTHR12220 SUPFAM:SSF54686 TIGRFAMs:TIGR01164 Uniprot:Q6END6
        Length = 136

 Score = 485 (175.8 bits), Expect = 3.0e-46, P = 3.0e-46
 Identities = 90/132 (68%), Positives = 100/132 (75%)

Query:   182 LAGPKRIKFPKQHRGRMTGKASRGNLICFGRYALQALEPAWITARQIEAGRRAMVRNVKR 241
             +  PKR +F KQHRGRM GK+ RGN ICFGRYALQALEP WITARQIEAGRRAM R  +R
Sbjct:     1 MLSPKRTRFRKQHRGRMKGKSYRGNCICFGRYALQALEPTWITARQIEAGRRAMTRYARR 60

Query:   242 GGKIWVRIFPDKPVTARPAETRMGSGKGSHAYWAAVVTPGKIIFEMSGVPENXXXXXXXX 301
             GGKIWVRIFPDKPVT RP ETRMGSGKGS  YW AVV PG+I++EM GV E         
Sbjct:    61 GGKIWVRIFPDKPVTIRPTETRMGSGKGSPEYWVAVVKPGRILYEMGGVSETVARVAISI 120

Query:   302 XXXXMPIKTQFV 313
                 MPI++QF+
Sbjct:   121 AASKMPIRSQFL 132


>TIGR_CMR|DET_0481 [details] [associations]
            symbol:DET_0481 "ribosomal protein L16" species:243164
            "Dehalococcoides ethenogenes 195" [GO:0003735 "structural
            constituent of ribosome" evidence=ISS] [GO:0006412 "translation"
            evidence=ISS] [GO:0015934 "large ribosomal subunit" evidence=ISS]
            HAMAP:MF_01342 InterPro:IPR000114 InterPro:IPR016180
            InterPro:IPR020798 Pfam:PF00252 PRINTS:PR00060 PROSITE:PS00586
            PROSITE:PS00701 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
            EMBL:CP000027 GenomeReviews:CP000027_GR GO:GO:0000049 GO:GO:0019843
            PANTHER:PTHR12220 SUPFAM:SSF54686 TIGRFAMs:TIGR01164
            HOGENOM:HOG000164573 eggNOG:COG0197 KO:K02878 OMA:GAPEYWV
            ProtClustDB:PRK09203 RefSeq:YP_181225.1 ProteinModelPortal:Q3Z974
            SMR:Q3Z974 STRING:Q3Z974 GeneID:3230140 KEGG:det:DET0481
            PATRIC:21608031 BioCyc:DETH243164:GJNF-481-MONOMER Uniprot:Q3Z974
        Length = 149

 Score = 389 (142.0 bits), Expect = 4.4e-36, P = 4.4e-36
 Identities = 71/139 (51%), Positives = 92/139 (66%)

Query:   185 PKRIKFPKQHRGRMTGKASRGNLICFGRYALQALEPAWITARQIEAGRRAMVRNVKRGGK 244
             PKR+KF K  RGR  G A +GN + FG +ALQ+LE  WITARQIEA RRA+ R ++RGG+
Sbjct:     4 PKRVKFRKVQRGRRDGAAHKGNTVAFGEFALQSLEAGWITARQIEATRRAITRYIRRGGQ 63

Query:   245 IWVRIFPDKPVTARPAETRMGSGKGSHAYWAAVVTPGKIIFEMSGVPENXXXXXXXXXXX 304
             +W+RIFPDKP+T +PAETR G GKG+   W AVV  G+I+FE+ GV              
Sbjct:    64 VWIRIFPDKPITKKPAETRQGGGKGAPEEWVAVVRRGRIMFEIGGVTPEAAKEAMRLASY 123

Query:   305 XMPIKTQFVMSGTSTSKDE 323
              MP+KT+FV      + +E
Sbjct:   124 KMPVKTRFVARDVPAAAEE 142


>TIGR_CMR|CHY_2302 [details] [associations]
            symbol:CHY_2302 "ribosomal protein L16" species:246194
            "Carboxydothermus hydrogenoformans Z-2901" [GO:0003735 "structural
            constituent of ribosome" evidence=ISS] [GO:0006412 "translation"
            evidence=ISS] HAMAP:MF_01342 InterPro:IPR000114 InterPro:IPR016180
            InterPro:IPR020798 Pfam:PF00252 PRINTS:PR00060 PROSITE:PS00586
            PROSITE:PS00701 EMBL:CP000141 GenomeReviews:CP000141_GR
            GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 GO:GO:0000049
            GO:GO:0019843 PANTHER:PTHR12220 SUPFAM:SSF54686 TIGRFAMs:TIGR01164
            HOGENOM:HOG000164573 eggNOG:COG0197 KO:K02878 OMA:GAPEYWV
            ProtClustDB:PRK09203 RefSeq:YP_361111.1 ProteinModelPortal:Q3A9S3
            SMR:Q3A9S3 STRING:Q3A9S3 GeneID:3728459 KEGG:chy:CHY_2302
            PATRIC:21277675 BioCyc:CHYD246194:GJCN-2301-MONOMER Uniprot:Q3A9S3
        Length = 143

 Score = 387 (141.3 bits), Expect = 7.2e-36, P = 7.2e-36
 Identities = 71/129 (55%), Positives = 91/129 (70%)

Query:   185 PKRIKFPKQHRGRMTGKASRGNLICFGRYALQALEPAWITARQIEAGRRAMVRNVKRGGK 244
             PKR+K+ + HR  + GKA  G  + FG Y LQA+E AWIT++QIEA R A+ R ++RGGK
Sbjct:     4 PKRVKYRRPHRPSLKGKAKGGTQLHFGEYGLQAVEGAWITSQQIEAARVAISRYIRRGGK 63

Query:   245 IWVRIFPDKPVTARPAETRMGSGKGSHAYWAAVVTPGKIIFEMSGVPENXXXXXXXXXXX 304
             IW+ IFPD P+T +PAETRMGSGKG+  YW AVV PGKI+FE++GV E            
Sbjct:    64 IWINIFPDHPITRKPAETRMGSGKGAPEYWVAVVKPGKIMFELAGVSEEVAREALRLASH 123

Query:   305 XMPIKTQFV 313
              +PIKT+FV
Sbjct:   124 KLPIKTKFV 132


>TIGR_CMR|BA_0117 [details] [associations]
            symbol:BA_0117 "ribosomal protein L16" species:198094
            "Bacillus anthracis str. Ames" [GO:0003735 "structural constituent
            of ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
            HAMAP:MF_01342 InterPro:IPR000114 InterPro:IPR016180
            InterPro:IPR020798 Pfam:PF00252 PRINTS:PR00060 PROSITE:PS00586
            PROSITE:PS00701 EMBL:AE016879 EMBL:AE017334 EMBL:AE017225
            GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
            GenomeReviews:AE017334_GR GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
            GO:GO:0000049 GO:GO:0019843 PANTHER:PTHR12220 SUPFAM:SSF54686
            TIGRFAMs:TIGR01164 HOGENOM:HOG000164573 eggNOG:COG0197 KO:K02878
            OMA:GAPEYWV ProtClustDB:PRK09203 RefSeq:NP_842685.1
            RefSeq:YP_016722.2 RefSeq:YP_026403.1 ProteinModelPortal:Q81VS3
            SMR:Q81VS3 DNASU:1086422 EnsemblBacteria:EBBACT00000008720
            EnsemblBacteria:EBBACT00000014165 EnsemblBacteria:EBBACT00000020476
            GeneID:1086422 GeneID:2819217 GeneID:2852422 KEGG:ban:BA_0117
            KEGG:bar:GBAA_0117 KEGG:bat:BAS0117
            BioCyc:BANT260799:GJAJ-128-MONOMER
            BioCyc:BANT261594:GJ7F-130-MONOMER Uniprot:Q81VS3
        Length = 144

 Score = 380 (138.8 bits), Expect = 4.0e-35, P = 4.0e-35
 Identities = 69/129 (53%), Positives = 89/129 (68%)

Query:   185 PKRIKFPKQHRGRMTGKASRGNLICFGRYALQALEPAWITARQIEAGRRAMVRNVKRGGK 244
             PKR+K+ ++HRG+M G+A  G  I FG + LQA   +WIT RQIEA RRAM R +KRGGK
Sbjct:     4 PKRVKYRREHRGKMRGRAKGGTEIAFGEFGLQAQAASWITNRQIEAARRAMTRYMKRGGK 63

Query:   245 IWVRIFPDKPVTARPAETRMGSGKGSHAYWAAVVTPGKIIFEMSGVPENXXXXXXXXXXX 304
             +W++IFP KP TA+P E RMGSGKG+   W AVV PGKI+FE++GV E            
Sbjct:    64 VWIKIFPSKPYTAKPLEVRMGSGKGAPEGWVAVVKPGKIMFEIAGVSEEVAREALRLAAH 123

Query:   305 XMPIKTQFV 313
              +P+K +FV
Sbjct:   124 KLPVKCKFV 132


>TIGR_CMR|GSU_2850 [details] [associations]
            symbol:GSU_2850 "ribosomal protein L16" species:243231
            "Geobacter sulfurreducens PCA" [GO:0003735 "structural constituent
            of ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
            [GO:0042254 "ribosome biogenesis" evidence=ISS] HAMAP:MF_01342
            InterPro:IPR000114 InterPro:IPR016180 InterPro:IPR020798
            Pfam:PF00252 PRINTS:PR00060 PROSITE:PS00586 PROSITE:PS00701
            GO:GO:0006412 GO:GO:0005840 EMBL:AE017180 GenomeReviews:AE017180_GR
            GO:GO:0003735 GO:GO:0000049 GO:GO:0019843 PANTHER:PTHR12220
            SUPFAM:SSF54686 TIGRFAMs:TIGR01164 HOGENOM:HOG000164573
            eggNOG:COG0197 KO:K02878 OMA:GAPEYWV ProtClustDB:PRK09203
            RefSeq:NP_953893.1 ProteinModelPortal:Q748Z5 SMR:Q748Z5
            GeneID:2688713 KEGG:gsu:GSU2850 PATRIC:22028547
            BioCyc:GSUL243231:GH27-2824-MONOMER Uniprot:Q748Z5
        Length = 140

 Score = 377 (137.8 bits), Expect = 8.3e-35, P = 8.3e-35
 Identities = 68/129 (52%), Positives = 87/129 (67%)

Query:   185 PKRIKFPKQHRGRMTGKASRGNLICFGRYALQALEPAWITARQIEAGRRAMVRNVKRGGK 244
             PKR+K  KQ +GRM G A RG  + FG + LQA E  W+ +RQIEA R AM R +KRGGK
Sbjct:     4 PKRVKHRKQMKGRMKGDAQRGASLAFGEFGLQATECGWVDSRQIEAARIAMTRYIKRGGK 63

Query:   245 IWVRIFPDKPVTARPAETRMGSGKGSHAYWAAVVTPGKIIFEMSGVPENXXXXXXXXXXX 304
             IW+R+FPDKP+T++PAETRMG GKGS   W  VV PGK+++EM GV E            
Sbjct:    64 IWIRLFPDKPLTSKPAETRMGKGKGSPDSWVCVVKPGKVLYEMEGVTEEIAREAFRLAAH 123

Query:   305 XMPIKTQFV 313
              +P+ T+F+
Sbjct:   124 KLPVGTKFI 132


>UNIPROTKB|P0ADY7 [details] [associations]
            symbol:rplP "50S ribosomal subunit protein L16"
            species:83333 "Escherichia coli K-12" [GO:0006412 "translation"
            evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0003735
            "structural constituent of ribosome" evidence=IEA] [GO:0030529
            "ribonucleoprotein complex" evidence=IEA] [GO:0019843 "rRNA
            binding" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
            [GO:0003723 "RNA binding" evidence=IEA] [GO:0000049 "tRNA binding"
            evidence=IEA] HAMAP:MF_01342 InterPro:IPR000114 InterPro:IPR016180
            InterPro:IPR020798 Pfam:PF00252 PRINTS:PR00060 PROSITE:PS00586
            PROSITE:PS00701 EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
            GenomeReviews:U00096_GR GO:GO:0006412 EMBL:U18997 GO:GO:0005840
            GO:GO:0003735 GO:GO:0000049 GO:GO:0019843 PDB:2VHM PDBsum:2VHM
            PDB:2RDO PDBsum:2RDO PANTHER:PTHR12220 SUPFAM:SSF54686
            TIGRFAMs:TIGR01164 HOGENOM:HOG000164573 eggNOG:COG0197 KO:K02878
            OMA:GAPEYWV PDB:3J0T PDB:3J0W PDB:3J0Y PDB:3J11 PDB:3J12 PDB:3J14
            PDB:3SGF PDB:3UOS PDBsum:3J0T PDBsum:3J0W PDBsum:3J0Y PDBsum:3J11
            PDBsum:3J12 PDBsum:3J14 PDBsum:3SGF PDBsum:3UOS PDB:1P85 PDB:1P86
            PDB:1VS6 PDB:1VS8 PDB:1VT2 PDB:2AW4 PDB:2AWB PDB:2GYA PDB:2GYC
            PDB:2I2T PDB:2I2V PDB:2J28 PDB:2QAM PDB:2QAO PDB:2QBA PDB:2QBC
            PDB:2QBE PDB:2QBG PDB:2QBI PDB:2QBK PDB:2QOV PDB:2QOX PDB:2QOZ
            PDB:2QP1 PDB:2VHN PDB:2WWQ PDB:2Z4L PDB:2Z4N PDB:3E1B PDB:3E1D
            PDB:3FIK PDB:3I1N PDB:3I1P PDB:3I1R PDB:3I1T PDB:3I20 PDB:3I22
            PDB:3IZT PDB:3IZU PDB:3J01 PDB:3J19 PDB:3KCR PDB:3OAS PDB:3OAT
            PDB:3OFC PDB:3OFD PDB:3OFQ PDB:3OFR PDB:3OFZ PDB:3OG0 PDB:3ORB
            PDB:3R8S PDB:3R8T PDB:4GAR PDB:4GAU PDBsum:1P85 PDBsum:1P86
            PDBsum:1VS6 PDBsum:1VS8 PDBsum:1VT2 PDBsum:2AW4 PDBsum:2AWB
            PDBsum:2GYA PDBsum:2GYC PDBsum:2I2T PDBsum:2I2V PDBsum:2J28
            PDBsum:2QAM PDBsum:2QAO PDBsum:2QBA PDBsum:2QBC PDBsum:2QBE
            PDBsum:2QBG PDBsum:2QBI PDBsum:2QBK PDBsum:2QOV PDBsum:2QOX
            PDBsum:2QOZ PDBsum:2QP1 PDBsum:2VHN PDBsum:2WWQ PDBsum:2Z4L
            PDBsum:2Z4N PDBsum:3E1B PDBsum:3E1D PDBsum:3FIK PDBsum:3I1N
            PDBsum:3I1P PDBsum:3I1R PDBsum:3I1T PDBsum:3I20 PDBsum:3I22
            PDBsum:3IZT PDBsum:3IZU PDBsum:3J01 PDBsum:3J19 PDBsum:3KCR
            PDBsum:3OAS PDBsum:3OAT PDBsum:3OFC PDBsum:3OFD PDBsum:3OFQ
            PDBsum:3OFR PDBsum:3OFZ PDBsum:3OG0 PDBsum:3ORB PDBsum:3R8S
            PDBsum:3R8T PDBsum:4GAR PDBsum:4GAU PDB:3BBX PDBsum:3BBX
            ProtClustDB:PRK09203 EMBL:X02613 EMBL:M12490 PIR:I23129
            RefSeq:NP_417772.1 RefSeq:YP_492119.1 ProteinModelPortal:P0ADY7
            SMR:P0ADY7 DIP:DIP-35976N IntAct:P0ADY7 MINT:MINT-1302401
            PhosSite:P0810431 PaxDb:P0ADY7 PRIDE:P0ADY7
            EnsemblBacteria:EBESCT00000004645 EnsemblBacteria:EBESCT00000016687
            GeneID:12934115 GeneID:947806 KEGG:ecj:Y75_p3863 KEGG:eco:b3313
            PATRIC:32122058 EchoBASE:EB0870 EcoGene:EG10877
            BioCyc:EcoCyc:EG10877-MONOMER BioCyc:ECOL316407:JW3275-MONOMER
            EvolutionaryTrace:P0ADY7 Genevestigator:P0ADY7 Uniprot:P0ADY7
        Length = 136

 Score = 357 (130.7 bits), Expect = 1.1e-32, P = 1.1e-32
 Identities = 67/129 (51%), Positives = 85/129 (65%)

Query:   185 PKRIKFPKQHRGRMTGKASRGNLICFGRYALQALEPAWITARQIEAGRRAMVRNVKRGGK 244
             PKR KF K H+GR  G A +G  + FG + L+A+    +TARQIEA RRAM R VKR GK
Sbjct:     4 PKRTKFRKMHKGRNRGLA-QGTDVSFGSFGLKAVGRGRLTARQIEAARRAMTRAVKRQGK 62

Query:   245 IWVRIFPDKPVTARPAETRMGSGKGSHAYWAAVVTPGKIIFEMSGVPENXXXXXXXXXXX 304
             IW+R+FPDKP+T +P   RMG GKG+  YW A++ PGK+++EM GVPE            
Sbjct:    63 IWIRVFPDKPITEKPLAVRMGKGKGNVEYWVALIQPGKVLYEMDGVPEELAREAFKLAAA 122

Query:   305 XMPIKTQFV 313
              +PIKT FV
Sbjct:   123 KLPIKTTFV 131


>TIGR_CMR|SPO_0488 [details] [associations]
            symbol:SPO_0488 "ribosomal protein L16" species:246200
            "Ruegeria pomeroyi DSS-3" [GO:0003735 "structural constituent of
            ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
            [GO:0042255 "ribosome assembly" evidence=ISS] HAMAP:MF_01342
            InterPro:IPR000114 InterPro:IPR016180 InterPro:IPR020798
            Pfam:PF00252 PRINTS:PR00060 PROSITE:PS00586 PROSITE:PS00701
            EMBL:CP000031 GenomeReviews:CP000031_GR GO:GO:0006412 GO:GO:0005840
            GO:GO:0003735 GO:GO:0000049 GO:GO:0019843 PANTHER:PTHR12220
            SUPFAM:SSF54686 TIGRFAMs:TIGR01164 HOGENOM:HOG000164573
            eggNOG:COG0197 KO:K02878 OMA:GAPEYWV ProtClustDB:PRK09203
            RefSeq:YP_165750.1 ProteinModelPortal:Q5LW55 SMR:Q5LW55
            GeneID:3195318 KEGG:sil:SPO0488 PATRIC:23374237 Uniprot:Q5LW55
        Length = 137

 Score = 356 (130.4 bits), Expect = 1.4e-32, P = 1.4e-32
 Identities = 67/130 (51%), Positives = 88/130 (67%)

Query:   185 PKRIKFPKQHRGRMTGKASRGNLICFGRYALQALEPAWITARQIEAGRRAMVRNVKRGGK 244
             PKR KF K  +GR+ G A  G+ + FG Y L+ALEP  +TARQIEA RRAM R++KR G+
Sbjct:     4 PKRTKFRKMFKGRIHGLAKGGSDLNFGTYGLKALEPERVTARQIEAARRAMTRHMKRQGR 63

Query:   245 IWVRIFPDKPVTARPAETRMGSGKGSHAYWAAVVTPGKIIFEMSGVPENXXXXXXXXXXX 304
             +W+RIFPD PVT++P E RMG GKGS  YWA  V PG+++FE+ GV +            
Sbjct:    64 VWIRIFPDTPVTSKPTEVRMGKGKGSVDYWACKVKPGRVMFEIDGVNDEIAREALRLAAM 123

Query:   305 XMPIKTQFVM 314
              +PIKT+ V+
Sbjct:   124 KLPIKTRVVV 133


>TIGR_CMR|CPS_0866 [details] [associations]
            symbol:CPS_0866 "ribosomal protein L16" species:167879
            "Colwellia psychrerythraea 34H" [GO:0003735 "structural constituent
            of ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
            [GO:0015934 "large ribosomal subunit" evidence=ISS] HAMAP:MF_01342
            InterPro:IPR000114 InterPro:IPR016180 InterPro:IPR020798
            Pfam:PF00252 PRINTS:PR00060 PROSITE:PS00586 PROSITE:PS00701
            GO:GO:0006412 GO:GO:0005840 EMBL:CP000083 GenomeReviews:CP000083_GR
            GO:GO:0003735 GO:GO:0000049 GO:GO:0019843 PANTHER:PTHR12220
            SUPFAM:SSF54686 TIGRFAMs:TIGR01164 HOGENOM:HOG000164573
            eggNOG:COG0197 KO:K02878 OMA:GAPEYWV ProtClustDB:PRK09203
            RefSeq:YP_267615.1 ProteinModelPortal:Q488A0 SMR:Q488A0
            STRING:Q488A0 GeneID:3520797 KEGG:cps:CPS_0866 PATRIC:21465025
            BioCyc:CPSY167879:GI48-952-MONOMER Uniprot:Q488A0
        Length = 137

 Score = 345 (126.5 bits), Expect = 2.0e-31, P = 2.0e-31
 Identities = 64/129 (49%), Positives = 83/129 (64%)

Query:   185 PKRIKFPKQHRGRMTGKASRGNLICFGRYALQALEPAWITARQIEAGRRAMVRNVKRGGK 244
             PKR KF KQ + R  G A  G+ + FG + L+++E   +TARQIEA RRAM R+VKR GK
Sbjct:     4 PKRTKFRKQFKLRNRGLAHVGSSVSFGTFGLKSMERGRMTARQIEAARRAMTRHVKRQGK 63

Query:   245 IWVRIFPDKPVTARPAETRMGSGKGSHAYWAAVVTPGKIIFEMSGVPENXXXXXXXXXXX 304
             IW+R+FPDKP+T +P E RMG GKGS  YW   + PG++++EM GV E            
Sbjct:    64 IWIRVFPDKPITKKPLEVRMGKGKGSVEYWVCQILPGRVLYEMEGVSEEIAREAFALAAS 123

Query:   305 XMPIKTQFV 313
              +P KT FV
Sbjct:   124 KLPFKTTFV 132


>TIGR_CMR|CBU_0245 [details] [associations]
            symbol:CBU_0245 "ribosomal protein L16" species:227377
            "Coxiella burnetii RSA 493" [GO:0003735 "structural constituent of
            ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
            HAMAP:MF_01342 InterPro:IPR000114 InterPro:IPR016180 Pfam:PF00252
            PRINTS:PR00060 PROSITE:PS00586 PROSITE:PS00701 GO:GO:0006412
            GO:GO:0005840 EMBL:AE016828 GenomeReviews:AE016828_GR GO:GO:0003735
            GO:GO:0000049 GO:GO:0019843 PANTHER:PTHR12220 SUPFAM:SSF54686
            TIGRFAMs:TIGR01164 HOGENOM:HOG000164573 eggNOG:COG0197 KO:K02878
            OMA:GAPEYWV ProtClustDB:PRK09203 RefSeq:NP_819289.1
            ProteinModelPortal:Q83ER9 SMR:Q83ER9 PRIDE:Q83ER9 GeneID:1208126
            KEGG:cbu:CBU_0245 PATRIC:17929183
            BioCyc:CBUR227377:GJ7S-251-MONOMER Uniprot:Q83ER9
        Length = 137

 Score = 340 (124.7 bits), Expect = 6.9e-31, P = 6.9e-31
 Identities = 65/129 (50%), Positives = 83/129 (64%)

Query:   185 PKRIKFPKQHRGRMTGKASRGNLICFGRYALQALEPAWITARQIEAGRRAMVRNVKRGGK 244
             P   K+ K  +GR  G ASRGN + FG + L+A E A ITARQ+EA RR + R++KRGGK
Sbjct:     4 PSNRKYRKDFKGRNRGVASRGNRVSFGEFGLKATECARITARQLEAARRTIARHIKRGGK 63

Query:   245 IWVRIFPDKPVTARPAETRMGSGKGSHAYWAAVVTPGKIIFEMSGVPENXXXXXXXXXXX 304
             I +RIFPDKP+T +P E R G GKGS  YW A+V PG++IFE+ GV E            
Sbjct:    64 ITIRIFPDKPITKKPLEVRQGKGKGSVEYWVALVQPGRMIFEIEGVDEALAREAFSRAAA 123

Query:   305 XMPIKTQFV 313
              +P+K  FV
Sbjct:   124 KLPLKCLFV 132


>UNIPROTKB|P95056 [details] [associations]
            symbol:rplP "50S ribosomal protein L16" species:1773
            "Mycobacterium tuberculosis" [GO:0005886 "plasma membrane"
            evidence=IDA] [GO:0040007 "growth" evidence=IMP] HAMAP:MF_01342
            InterPro:IPR000114 InterPro:IPR016180 InterPro:IPR020798
            Pfam:PF00252 PRINTS:PR00060 PROSITE:PS00586 PROSITE:PS00701
            GO:GO:0005886 GO:GO:0040007 EMBL:AE000516 GenomeReviews:AE000516_GR
            GenomeReviews:AL123456_GR GO:GO:0006412 GO:GO:0005840 EMBL:BX842574
            GO:GO:0003735 GO:GO:0000049 GO:GO:0019843 PANTHER:PTHR12220
            SUPFAM:SSF54686 TIGRFAMs:TIGR01164 HOGENOM:HOG000164573
            eggNOG:COG0197 KO:K02878 OMA:GAPEYWV ProtClustDB:PRK09203
            PIR:G70642 RefSeq:NP_215222.1 RefSeq:NP_335152.1
            RefSeq:YP_006514052.1 ProteinModelPortal:P95056 SMR:P95056
            PRIDE:P95056 EnsemblBacteria:EBMYCT00000000956
            EnsemblBacteria:EBMYCT00000069790 GeneID:13318597 GeneID:888377
            GeneID:926025 KEGG:mtc:MT0735 KEGG:mtu:Rv0708 KEGG:mtv:RVBD_0708
            PATRIC:18123347 TubercuList:Rv0708 Uniprot:P95056
        Length = 138

 Score = 339 (124.4 bits), Expect = 8.8e-31, P = 8.8e-31
 Identities = 62/129 (48%), Positives = 86/129 (66%)

Query:   185 PKRIKFPKQHRGRMTGKASRGNLICFGRYALQALEPAWITARQIEAGRRAMVRNVKRGGK 244
             P+++K  KQH  R  G AS G  + FG Y +QALE A++T RQIE+ R A+ R++KRGGK
Sbjct:     4 PRKVKHRKQHHPRQRGIASGGTTVNFGDYGIQALEHAYVTNRQIESARIAINRHIKRGGK 63

Query:   245 IWVRIFPDKPVTARPAETRMGSGKGSHAYWAAVVTPGKIIFEMSGVPENXXXXXXXXXXX 304
             +W+ IFPD+P+T +PAETRMGSGKGS  +W A V PG+++FE+S   E            
Sbjct:    64 VWINIFPDRPLTKKPAETRMGSGKGSPEWWVANVKPGRVLFELSYPNEGVARAALTRAIH 123

Query:   305 XMPIKTQFV 313
              +PIK + +
Sbjct:   124 KLPIKARII 132


>TIGR_CMR|SO_0238 [details] [associations]
            symbol:SO_0238 "ribosomal protein L16" species:211586
            "Shewanella oneidensis MR-1" [GO:0003735 "structural constituent of
            ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
            HAMAP:MF_01342 InterPro:IPR000114 InterPro:IPR016180
            InterPro:IPR020798 Pfam:PF00252 PRINTS:PR00060 PROSITE:PS00586
            PROSITE:PS00701 GO:GO:0006412 GO:GO:0005840 EMBL:AE014299
            GenomeReviews:AE014299_GR GO:GO:0003735 GO:GO:0000049 GO:GO:0019843
            PANTHER:PTHR12220 SUPFAM:SSF54686 TIGRFAMs:TIGR01164
            HOGENOM:HOG000164573 eggNOG:COG0197 KO:K02878 OMA:GAPEYWV
            ProtClustDB:PRK09203 RefSeq:NP_715878.1 ProteinModelPortal:Q8EK62
            SMR:Q8EK62 GeneID:1168121 KEGG:son:SO_0238 PATRIC:23520169
            Uniprot:Q8EK62
        Length = 136

 Score = 338 (124.0 bits), Expect = 1.1e-30, P = 1.1e-30
 Identities = 62/129 (48%), Positives = 86/129 (66%)

Query:   185 PKRIKFPKQHRGRMTGKASRGNLICFGRYALQALEPAWITARQIEAGRRAMVRNVKRGGK 244
             PKR+KF K  +GR  G A+ G  + FG + L+A+    +TARQIE+ RRAM R++KR G+
Sbjct:     4 PKRMKFRKMFKGRNRGLAN-GTEVSFGTFGLKAVGRGRLTARQIESARRAMTRHIKRQGQ 62

Query:   245 IWVRIFPDKPVTARPAETRMGSGKGSHAYWAAVVTPGKIIFEMSGVPENXXXXXXXXXXX 304
             IW+R+FPDKP+T++P E RMG GKG+  YW   + PGK+++EM+GV E            
Sbjct:    63 IWIRVFPDKPITSKPLEVRMGKGKGNVEYWVCQIQPGKVLYEMNGVSEVIAREAFALAAA 122

Query:   305 XMPIKTQFV 313
              +PIKT FV
Sbjct:   123 KLPIKTTFV 131


>UNIPROTKB|Q9KNZ1 [details] [associations]
            symbol:rplP "50S ribosomal protein L16" species:243277
            "Vibrio cholerae O1 biovar El Tor str. N16961" [GO:0003735
            "structural constituent of ribosome" evidence=ISS] [GO:0006412
            "translation" evidence=ISS] HAMAP:MF_01342 InterPro:IPR000114
            InterPro:IPR016180 InterPro:IPR020798 Pfam:PF00252 PRINTS:PR00060
            PROSITE:PS00586 PROSITE:PS00701 GO:GO:0006412 EMBL:AE003852
            GenomeReviews:AE003852_GR GO:GO:0005840 GO:GO:0003735 GO:GO:0000049
            GO:GO:0019843 PANTHER:PTHR12220 SUPFAM:SSF54686 TIGRFAMs:TIGR01164
            eggNOG:COG0197 KO:K02878 OMA:GAPEYWV ProtClustDB:PRK09203
            PIR:G82058 RefSeq:NP_232217.1 ProteinModelPortal:Q9KNZ1 SMR:Q9KNZ1
            DNASU:2615606 GeneID:2615606 KEGG:vch:VC2589 PATRIC:20084204
            Uniprot:Q9KNZ1
        Length = 136

 Score = 336 (123.3 bits), Expect = 1.8e-30, P = 1.8e-30
 Identities = 63/129 (48%), Positives = 82/129 (63%)

Query:   185 PKRIKFPKQHRGRMTGKASRGNLICFGRYALQALEPAWITARQIEAGRRAMVRNVKRGGK 244
             PKR KF K   GR  G A +G  + FG + L+A+    +TARQIEA RRAM R++KR GK
Sbjct:     4 PKRTKFRKVQTGRNRGLA-KGTEVSFGTFGLKAVGRGRLTARQIEAARRAMTRHIKRQGK 62

Query:   245 IWVRIFPDKPVTARPAETRMGSGKGSHAYWAAVVTPGKIIFEMSGVPENXXXXXXXXXXX 304
             IW+R+FPDKP+T +P E R G GKG+  YW A + PGK+++E+ GVPE            
Sbjct:    63 IWIRVFPDKPITEKPLEVRQGKGKGNVEYWVAQIQPGKVMYEVDGVPEELAREAFRLAAR 122

Query:   305 XMPIKTQFV 313
              +P KT FV
Sbjct:   123 KLPFKTTFV 131


>TIGR_CMR|VC_2589 [details] [associations]
            symbol:VC_2589 "ribosomal protein L16" species:686 "Vibrio
            cholerae O1 biovar El Tor" [GO:0003735 "structural constituent of
            ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
            HAMAP:MF_01342 InterPro:IPR000114 InterPro:IPR016180
            InterPro:IPR020798 Pfam:PF00252 PRINTS:PR00060 PROSITE:PS00586
            PROSITE:PS00701 GO:GO:0006412 EMBL:AE003852
            GenomeReviews:AE003852_GR GO:GO:0005840 GO:GO:0003735 GO:GO:0000049
            GO:GO:0019843 PANTHER:PTHR12220 SUPFAM:SSF54686 TIGRFAMs:TIGR01164
            eggNOG:COG0197 KO:K02878 OMA:GAPEYWV ProtClustDB:PRK09203
            PIR:G82058 RefSeq:NP_232217.1 ProteinModelPortal:Q9KNZ1 SMR:Q9KNZ1
            DNASU:2615606 GeneID:2615606 KEGG:vch:VC2589 PATRIC:20084204
            Uniprot:Q9KNZ1
        Length = 136

 Score = 336 (123.3 bits), Expect = 1.8e-30, P = 1.8e-30
 Identities = 63/129 (48%), Positives = 82/129 (63%)

Query:   185 PKRIKFPKQHRGRMTGKASRGNLICFGRYALQALEPAWITARQIEAGRRAMVRNVKRGGK 244
             PKR KF K   GR  G A +G  + FG + L+A+    +TARQIEA RRAM R++KR GK
Sbjct:     4 PKRTKFRKVQTGRNRGLA-KGTEVSFGTFGLKAVGRGRLTARQIEAARRAMTRHIKRQGK 62

Query:   245 IWVRIFPDKPVTARPAETRMGSGKGSHAYWAAVVTPGKIIFEMSGVPENXXXXXXXXXXX 304
             IW+R+FPDKP+T +P E R G GKG+  YW A + PGK+++E+ GVPE            
Sbjct:    63 IWIRVFPDKPITEKPLEVRQGKGKGNVEYWVAQIQPGKVMYEVDGVPEELAREAFRLAAR 122

Query:   305 XMPIKTQFV 313
              +P KT FV
Sbjct:   123 KLPFKTTFV 131


>TIGR_CMR|CJE_1868 [details] [associations]
            symbol:CJE_1868 "ribosomal protein L16" species:195099
            "Campylobacter jejuni RM1221" [GO:0003735 "structural constituent
            of ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
            [GO:0042254 "ribosome biogenesis" evidence=ISS] HAMAP:MF_01342
            InterPro:IPR000114 InterPro:IPR016180 InterPro:IPR020798
            Pfam:PF00252 PRINTS:PR00060 PROSITE:PS00586 PROSITE:PS00701
            GO:GO:0006412 GO:GO:0005840 EMBL:CP000025 GenomeReviews:CP000025_GR
            GO:GO:0003735 GO:GO:0000049 GO:GO:0019843 PANTHER:PTHR12220
            SUPFAM:SSF54686 TIGRFAMs:TIGR01164 HOGENOM:HOG000164573
            eggNOG:COG0197 KO:K02878 OMA:GAPEYWV ProtClustDB:PRK09203
            RefSeq:YP_179838.1 ProteinModelPortal:Q5HS97 SMR:Q5HS97
            STRING:Q5HS97 GeneID:3232495 KEGG:cjr:CJE1868 PATRIC:20045568
            BioCyc:CJEJ195099:GJC0-1907-MONOMER Uniprot:Q5HS97
        Length = 141

 Score = 326 (119.8 bits), Expect = 2.1e-29, P = 2.1e-29
 Identities = 66/139 (47%), Positives = 86/139 (61%)

Query:   185 PKRIKFPKQHRGRMTGKASRGNLICFGRYALQALEPAWITARQIEAGRRAMVRNVKRGGK 244
             PKR K+ K  +GR  G A+RG    FG +AL+A E   I +RQIEA R A+ R VKR GK
Sbjct:     4 PKRTKYRKMMKGRNRGYANRGTEFTFGEFALKATEAGRINSRQIEAARIALTRFVKRQGK 63

Query:   245 IWVRIFPDKPVTARPAETRMGSGKGSHAYWAAVVTPGKIIFEMSGVPENXXXXXXXXXXX 304
              W+R+FPDKP+T +P ETRMG GKG+   W   + PG+II+EM+GV E            
Sbjct:    64 TWIRVFPDKPLTKKPLETRMGKGKGAVEEWVMNIKPGRIIYEMAGVSEEMAREALTLAMH 123

Query:   305 XMPIKTQFVMSGTSTSKDE 323
              +P KT+FV   T  S++E
Sbjct:   124 KLPFKTKFV---TRESQNE 139


>TIGR_CMR|ECH_0416 [details] [associations]
            symbol:ECH_0416 "ribosomal protein L16" species:205920
            "Ehrlichia chaffeensis str. Arkansas" [GO:0003735 "structural
            constituent of ribosome" evidence=ISS] [GO:0006412 "translation"
            evidence=ISS] [GO:0015934 "large ribosomal subunit" evidence=ISS]
            HAMAP:MF_01342 InterPro:IPR000114 InterPro:IPR016180
            InterPro:IPR020798 Pfam:PF00252 PRINTS:PR00060 PROSITE:PS00586
            PROSITE:PS00701 EMBL:CP000236 GenomeReviews:CP000236_GR
            GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 GO:GO:0000049
            GO:GO:0019843 PANTHER:PTHR12220 SUPFAM:SSF54686 TIGRFAMs:TIGR01164
            HOGENOM:HOG000164573 eggNOG:COG0197 KO:K02878 OMA:GAPEYWV
            ProtClustDB:PRK09203 RefSeq:YP_507234.1 ProteinModelPortal:Q2GH49
            SMR:Q2GH49 STRING:Q2GH49 GeneID:3927602 KEGG:ech:ECH_0416
            PATRIC:20576309 BioCyc:ECHA205920:GJNR-417-MONOMER Uniprot:Q2GH49
        Length = 136

 Score = 298 (110.0 bits), Expect = 1.9e-26, P = 1.9e-26
 Identities = 55/129 (42%), Positives = 81/129 (62%)

Query:   185 PKRIKFPKQHRGRMTGKASRGNLICFGRYALQALEPAWITARQIEAGRRAMVRNVKRGGK 244
             PK+ K+ K  +GR++G A  G  + FG + L+ALEP+ +T++QIE+ RR++ R +KR GK
Sbjct:     4 PKKTKYKKDFKGRISGNAKGGYTLSFGSHGLKALEPSRLTSKQIESARRSISRTLKRVGK 63

Query:   245 IWVRIFPDKPVTARPAETRMGSGKGSHAYWAAVVTPGKIIFEMSGVPENXXXXXXXXXXX 304
             +W+R F    V+ +P + RMG GKGS   W   V PGKI+FE+ GVP N           
Sbjct:    64 VWIRAFCHTSVSKKPMDVRMGKGKGSVEMWVCKVKPGKILFEIGGVPLNLAREALNKAQA 123

Query:   305 XMPIKTQFV 313
              +P+K +FV
Sbjct:   124 KLPMKCKFV 132


>TIGR_CMR|APH_0287 [details] [associations]
            symbol:APH_0287 "ribosomal protein L16" species:212042
            "Anaplasma phagocytophilum HZ" [GO:0000315 "organellar large
            ribosomal subunit" evidence=ISS] [GO:0003735 "structural
            constituent of ribosome" evidence=ISS] [GO:0006412 "translation"
            evidence=ISS] HAMAP:MF_01342 InterPro:IPR000114 InterPro:IPR016180
            InterPro:IPR020798 Pfam:PF00252 PRINTS:PR00060 PROSITE:PS00586
            PROSITE:PS00701 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
            EMBL:CP000235 GenomeReviews:CP000235_GR GO:GO:0000049 GO:GO:0019843
            PANTHER:PTHR12220 SUPFAM:SSF54686 TIGRFAMs:TIGR01164
            HOGENOM:HOG000164573 eggNOG:COG0197 KO:K02878 OMA:GAPEYWV
            RefSeq:YP_504899.1 ProteinModelPortal:Q2GL52 SMR:Q2GL52
            STRING:Q2GL52 GeneID:3930847 KEGG:aph:APH_0287 PATRIC:20949148
            ProtClustDB:PRK09203 BioCyc:APHA212042:GHPM-317-MONOMER
            Uniprot:Q2GL52
        Length = 137

 Score = 288 (106.4 bits), Expect = 2.2e-25, P = 2.2e-25
 Identities = 53/136 (38%), Positives = 82/136 (60%)

Query:   181 LLAGPKRIKFPKQHRGRMTGKASRGNLICFGRYALQALEPAWITARQIEAGRRAMVRNVK 240
             +L  P++ K  K  +GR++G    G+ + FG+  L+ALEP  +T++QIE+ RR++ R+++
Sbjct:     1 MLFVPRKTKHSKSFKGRISGNTKGGSELAFGQCGLKALEPCRLTSKQIESARRSISRSLR 60

Query:   241 RGGKIWVRIFPDKPVTARPAETRMGSGKGSHAYWAAVVTPGKIIFEMSGVPENXXXXXXX 300
             R GK+W+R+F   PV+ +P + RMG GKGS   W   V PG+I+FE+ GV          
Sbjct:    61 RVGKVWIRVFCHVPVSKKPVDVRMGKGKGSTEMWVCKVQPGRILFEIGGVSVELAREAFR 120

Query:   301 XXXXXMPIKTQFVMSG 316
                  +PIK  FV  G
Sbjct:   121 KAQSKLPIKCSFVEEG 136


>TIGR_CMR|NSE_0273 [details] [associations]
            symbol:NSE_0273 "ribosomal protein L16" species:222891
            "Neorickettsia sennetsu str. Miyayama" [GO:0003735 "structural
            constituent of ribosome" evidence=ISS] [GO:0006412 "translation"
            evidence=ISS] [GO:0015934 "large ribosomal subunit" evidence=ISS]
            HAMAP:MF_01342 InterPro:IPR000114 InterPro:IPR016180 Pfam:PF00252
            PRINTS:PR00060 PROSITE:PS00586 PROSITE:PS00701 GO:GO:0006412
            GO:GO:0005840 GO:GO:0003735 GO:GO:0000049 GO:GO:0019843
            EMBL:CP000237 GenomeReviews:CP000237_GR PANTHER:PTHR12220
            SUPFAM:SSF54686 TIGRFAMs:TIGR01164 HOGENOM:HOG000164573
            eggNOG:COG0197 KO:K02878 OMA:GAPEYWV ProtClustDB:PRK09203
            RefSeq:YP_506164.1 ProteinModelPortal:Q2GED2 STRING:Q2GED2
            GeneID:3932038 KEGG:nse:NSE_0273 PATRIC:22680639
            BioCyc:NSEN222891:GHFU-300-MONOMER Uniprot:Q2GED2
        Length = 139

 Score = 260 (96.6 bits), Expect = 2.1e-22, P = 2.1e-22
 Identities = 46/132 (34%), Positives = 76/132 (57%)

Query:   182 LAGPKRIKFPKQHRGRMTGKASRGNLICFGRYALQALEPAWITARQIEAGRRAMVRNVKR 241
             +  PK++K  K  + R +  ++RG+ + FG Y L+A+  A +  RQIE+ RR + R V +
Sbjct:     1 MLAPKKLKHKKFRKVRFSDASARGSGLAFGEYGLKAIGSARLNGRQIESARRVITRIVSK 60

Query:   242 GGKIWVRIFPDKPVTARPAETRMGSGKGSHAYWAAVVTPGKIIFEMSGVPENXXXXXXXX 301
              GK+W+ +FP  P+T +P + RMG GKGS   +   ++PG+++FE+ GV           
Sbjct:    61 AGKLWINVFPGIPLTRKPTDVRMGGGKGSVDSYIFAISPGRVLFELGGVDREKAKLALCK 120

Query:   302 XXXXMPIKTQFV 313
                 +P  T+FV
Sbjct:   121 ASAKLPFSTKFV 132


>UNIPROTKB|P46801 [details] [associations]
            symbol:RPL16 "60S ribosomal protein L16, mitochondrial"
            species:39947 "Oryza sativa Japonica Group" [GO:0005739
            "mitochondrion" evidence=IC;ISS] InterPro:IPR000114
            InterPro:IPR016180 InterPro:IPR020798 Pfam:PF00252 PRINTS:PR00060
            PROSITE:PS00586 PROSITE:PS00701 GO:GO:0005739 GO:GO:0006412
            GO:GO:0005840 GO:GO:0003735 GO:GO:0019843 PANTHER:PTHR12220
            SUPFAM:SSF54686 TIGRFAMs:TIGR01164 HOGENOM:HOG000164573
            eggNOG:COG0197 EMBL:D21251 EMBL:D32052 PIR:T03233
            RefSeq:NP_001066902.1 ProteinModelPortal:P46801 STRING:P46801
            EnsemblPlants:LOC_Os12g34056.1 EnsemblPlants:LOC_Os12g34128.1
            EnsemblPlants:LOC_Osm1g00270.1 GeneID:4352371 KEGG:osa:4352371
            Gramene:P46801 OMA:GQIPFEM ProtClustDB:CLSN2698893 Uniprot:P46801
        Length = 185

 Score = 201 (75.8 bits), Expect = 3.7e-16, P = 3.7e-16
 Identities = 48/115 (41%), Positives = 63/115 (54%)

Query:   185 PKRIKFPKQHRGRMT-GKASRGNLICFGRYALQALEPAWITARQIEAGRRA--------M 235
             PKR K+ K  + R + G    G  + FGRY  ++     ++ R IEA RRA        M
Sbjct:    45 PKRTKYSKYSKCRCSRGCEPDGTQLGFGRYGTKSCRAGRLSYRAIEAARRATIGQFHRAM 104

Query:   236 VRNVKRGGKIWVRIFPDKPVTARPAETRMGSGKGSHAYWAAVVTPGKIIFEMSGV 290
                 +R  KIWVR+  D P+T +PAE RMG GKG+   W A V+ G+I FEM GV
Sbjct:   105 SGQFRRNCKIWVRVLADLPITGKPAEVRMGRGKGNPTGWIARVSTGQIPFEMDGV 159


>UNIPROTKB|Q2F932 [details] [associations]
            symbol:rpl16 "Os12g0524700 protein" species:39947 "Oryza
            sativa Japonica Group" [GO:0005739 "mitochondrion" evidence=IC]
            InterPro:IPR000114 InterPro:IPR016180 InterPro:IPR020798
            Pfam:PF00252 PRINTS:PR00060 PROSITE:PS00586 PROSITE:PS00701
            GO:GO:0005739 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
            GO:GO:0019843 EMBL:AP008218 EMBL:DQ167807 EMBL:DQ167400
            PANTHER:PTHR12220 SUPFAM:SSF54686 TIGRFAMs:TIGR01164
            RefSeq:NP_001066902.1 EnsemblPlants:LOC_Os12g34056.1
            EnsemblPlants:LOC_Os12g34128.1 EnsemblPlants:LOC_Osm1g00270.1
            GeneID:4352371 KEGG:osa:4352371 OMA:GQIPFEM ProtClustDB:CLSN2698893
            STRING:Q2F932 Uniprot:Q2F932
        Length = 185

 Score = 201 (75.8 bits), Expect = 3.7e-16, P = 3.7e-16
 Identities = 48/115 (41%), Positives = 63/115 (54%)

Query:   185 PKRIKFPKQHRGRMT-GKASRGNLICFGRYALQALEPAWITARQIEAGRRA--------M 235
             PKR K+ K  + R + G    G  + FGRY  ++     ++ R IEA RRA        M
Sbjct:    45 PKRTKYSKYSKCRCSRGCEPDGTQLGFGRYGTKSCRAGRLSYRAIEAARRATIGQFHRAM 104

Query:   236 VRNVKRGGKIWVRIFPDKPVTARPAETRMGSGKGSHAYWAAVVTPGKIIFEMSGV 290
                 +R  KIWVR+  D P+T +PAE RMG GKG+   W A V+ G+I FEM GV
Sbjct:   105 SGQFRRNCKIWVRVLADLPITGKPAEVRMGRGKGNPTGWIARVSTGQIPFEMDGV 159


>UNIPROTKB|Q2F985 [details] [associations]
            symbol:rpl16 "Ribosomal protein L16" species:39946 "Oryza
            sativa Indica Group" [GO:0005739 "mitochondrion" evidence=IC]
            InterPro:IPR000114 InterPro:IPR016180 InterPro:IPR020798
            Pfam:PF00252 PRINTS:PR00060 PROSITE:PS00586 PROSITE:PS00701
            GO:GO:0005739 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
            GO:GO:0019843 EMBL:DQ167399 PANTHER:PTHR12220 SUPFAM:SSF54686
            TIGRFAMs:TIGR01164 EMBL:JN861111 EMBL:JN861112 EMBL:AP011077
            RefSeq:YP_514648.1 ProteinModelPortal:Q2F985 PRIDE:Q2F985
            GeneID:3950722 Gramene:Q2F985 Uniprot:Q2F985
        Length = 185

 Score = 201 (75.8 bits), Expect = 3.7e-16, P = 3.7e-16
 Identities = 48/115 (41%), Positives = 63/115 (54%)

Query:   185 PKRIKFPKQHRGRMT-GKASRGNLICFGRYALQALEPAWITARQIEAGRRA--------M 235
             PKR K+ K  + R + G    G  + FGRY  ++     ++ R IEA RRA        M
Sbjct:    45 PKRTKYSKYSKCRCSRGCEPDGTQLGFGRYGTKSCRAGRLSYRAIEAARRATIGQFHRAM 104

Query:   236 VRNVKRGGKIWVRIFPDKPVTARPAETRMGSGKGSHAYWAAVVTPGKIIFEMSGV 290
                 +R  KIWVR+  D P+T +PAE RMG GKG+   W A V+ G+I FEM GV
Sbjct:   105 SGQFRRNCKIWVRVLADLPITGKPAEVRMGRGKGNPTGWIARVSTGQIPFEMDGV 159


>SGD|S000000134 [details] [associations]
            symbol:MRPL16 "Mitochondrial ribosomal protein of the large
            subunit" species:4932 "Saccharomyces cerevisiae" [GO:0005840
            "ribosome" evidence=IEA] [GO:0003735 "structural constituent of
            ribosome" evidence=IEA;IDA] [GO:0005739 "mitochondrion"
            evidence=IEA;IDA] [GO:0005762 "mitochondrial large ribosomal
            subunit" evidence=IDA] [GO:0032543 "mitochondrial translation"
            evidence=IC] [GO:0000048 "peptidyltransferase activity"
            evidence=ISS] [GO:0006412 "translation" evidence=IEA] [GO:0030529
            "ribonucleoprotein complex" evidence=IEA] [GO:0005622
            "intracellular" evidence=IEA] [GO:0019843 "rRNA binding"
            evidence=IEA] InterPro:IPR000114 InterPro:IPR016180
            InterPro:IPR020798 Pfam:PF00252 PRINTS:PR00060 PROSITE:PS00586
            PROSITE:PS00701 SGD:S000000134 EMBL:BK006936 GO:GO:0005762
            GO:GO:0003735 GO:GO:0032543 GO:GO:0019843 EMBL:X78214
            PANTHER:PTHR12220 SUPFAM:SSF54686 TIGRFAMs:TIGR01164 eggNOG:COG0197
            GO:GO:0000048 HOGENOM:HOG000164574 OMA:HEYAPRF OrthoDB:EOG4T4H51
            EMBL:X53995 EMBL:Z35799 PIR:S50292 RefSeq:NP_009515.1
            ProteinModelPortal:P38064 SMR:P38064 DIP:DIP-3939N IntAct:P38064
            MINT:MINT-535690 STRING:P38064 PaxDb:P38064 EnsemblFungi:YBL038W
            GeneID:852242 KEGG:sce:YBL038W CYGD:YBL038w NextBio:970796
            Genevestigator:P38064 GermOnline:YBL038W Uniprot:P38064
        Length = 232

 Score = 158 (60.7 bits), Expect = 4.8e-10, P = 4.8e-10
 Identities = 37/104 (35%), Positives = 61/104 (58%)

Query:   192 KQHRGRM---TGKASRGNLICFGRYALQAL-EPAWITARQIEAGRRAMVRNVK--RGGKI 245
             K+ +GR+   TG + +G+ + FG+Y L+   E   I+A+Q++    A++R V+    G +
Sbjct:    50 KKQKGRVPVRTGGSIKGSTLQFGKYGLRLKSEGIRISAQQLKEADNAIMRYVRPLNNGHL 109

Query:   246 WVRIFPDKPVTARPAETRMGSGKGSHAYWAAVVTPGKIIFEMSG 289
             W R+  +  V  +  ETRMG GKG   +W   V  GKI+FE++G
Sbjct:   110 WRRLCTNVAVCIKGNETRMGKGKGGFDHWMVRVPTGKILFEING 153


>POMBASE|SPBC1105.03c [details] [associations]
            symbol:mrpl16 "mitochondrial ribosomal protein subunit
            L16 (predicted)" species:4896 "Schizosaccharomyces pombe"
            [GO:0000048 "peptidyltransferase activity" evidence=ISS]
            [GO:0003735 "structural constituent of ribosome" evidence=ISS]
            [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005762 "mitochondrial
            large ribosomal subunit" evidence=ISS] [GO:0006412 "translation"
            evidence=ISS] [GO:0019843 "rRNA binding" evidence=IEA] [GO:0032543
            "mitochondrial translation" evidence=NAS] InterPro:IPR000114
            InterPro:IPR016180 InterPro:IPR020798 Pfam:PF00252 PRINTS:PR00060
            PROSITE:PS00701 PomBase:SPBC1105.03c EMBL:CU329671
            GenomeReviews:CU329671_GR GO:GO:0005762 GO:GO:0003735 GO:GO:0032543
            GO:GO:0019843 PANTHER:PTHR12220 SUPFAM:SSF54686 TIGRFAMs:TIGR01164
            eggNOG:COG0197 GO:GO:0000048 PIR:T39280 RefSeq:NP_596459.1
            HSSP:Q9RXJ5 ProteinModelPortal:Q9Y822 STRING:Q9Y822
            EnsemblFungi:SPBC1105.03c.1 GeneID:2539752 KEGG:spo:SPBC1105.03c
            HOGENOM:HOG000164574 OMA:HEYAPRF OrthoDB:EOG4T4H51 NextBio:20800903
            Uniprot:Q9Y822
        Length = 215

 Score = 151 (58.2 bits), Expect = 1.8e-09, P = 1.8e-09
 Identities = 34/111 (30%), Positives = 62/111 (55%)

Query:   185 PKRIKFPKQHRGRMT---GKASRGNLICFGRYALQALEPAW-ITARQIEAGRRAMVRNVK 240
             P+ I+  K  +GR+    G + RG  + +G Y ++  + +    A+Q+E   + + R +K
Sbjct:    42 PRSIRNQKAQKGRVPIPIGGSLRGTQLEWGEYGMRLKDRSIRFHAKQLETAEQILKRILK 101

Query:   241 --RGGKIWVRIFPDKPVTARPAETRMGSGKGSHAYWAAVVTPGKIIFEMSG 289
               +  +++ R   + PV  +  ETRMG GKG+  YWAA +  G+++FE+ G
Sbjct:   102 PIKAARVYTRFCCNVPVCVKGNETRMGKGKGAFEYWAARIPIGRVLFEIGG 152


>DICTYBASE|DDB_G0294042 [details] [associations]
            symbol:mrpl16 "ribosomal protein L16" species:44689
            "Dictyostelium discoideum" [GO:0019843 "rRNA binding" evidence=IEA]
            [GO:0006412 "translation" evidence=IEA] [GO:0005840 "ribosome"
            evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0003735
            "structural constituent of ribosome" evidence=IEA] [GO:0030529
            "ribonucleoprotein complex" evidence=IEA] [GO:0005739
            "mitochondrion" evidence=IEA] InterPro:IPR000114 InterPro:IPR016180
            InterPro:IPR020798 Pfam:PF00252 PROSITE:PS00586 PROSITE:PS00701
            dictyBase:DDB_G0294042 GO:GO:0005739 GO:GO:0006412 GO:GO:0005840
            GO:GO:0003735 EMBL:AB000109 GenomeReviews:AB000109_GR GO:GO:0019843
            EMBL:D63523 PANTHER:PTHR12220 SUPFAM:SSF54686 eggNOG:COG0197
            PIR:T43774 RefSeq:NP_050095.1 ProteinModelPortal:O21032
            STRING:O21032 GeneID:2193921 KEGG:ddi:DidioMp28 Uniprot:O21032
        Length = 144

 Score = 136 (52.9 bits), Expect = 8.7e-09, P = 8.7e-09
 Identities = 30/102 (29%), Positives = 52/102 (50%)

Query:   185 PKRIKFPKQHRGRMTGKASRGNLICFGRYALQALEPAWITARQIEAGRRAMVRNVKRGGK 244
             P R KF K H+  +  K +R   +  G Y ++A E  ++  +Q+E  +  +V+ +K    
Sbjct:     4 PNRQKFTKNHKRNLITKETRKTGLVLGNYGIKATETGYLKMKQMERIKGDLVKKLKDNMD 63

Query:   245 IWVRIFPDKPVTARPAETRMGSGKGSHAYWAAVVTPGKIIFE 286
             I+   +P   +T +    RMG+GKG  + W  +V  G I+ E
Sbjct:    64 IYFNFYPLFGLTNK-GTARMGAGKGEVSEWYVLVKKGSIVVE 104


>CGD|CAL0004340 [details] [associations]
            symbol:orf19.2019 species:5476 "Candida albicans" [GO:0005762
            "mitochondrial large ribosomal subunit" evidence=IEA] [GO:0003735
            "structural constituent of ribosome" evidence=IEA]
            InterPro:IPR000114 InterPro:IPR016180 InterPro:IPR020798
            Pfam:PF00252 PRINTS:PR00060 PROSITE:PS00701 CGD:CAL0004340
            GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 GO:GO:0019843
            EMBL:AACQ01000031 PANTHER:PTHR12220 SUPFAM:SSF54686
            TIGRFAMs:TIGR01164 eggNOG:COG0197 RefSeq:XP_719468.1
            ProteinModelPortal:Q5AD48 STRING:Q5AD48 GeneID:3638836
            KEGG:cal:CaO19.2019 Uniprot:Q5AD48
        Length = 213

 Score = 138 (53.6 bits), Expect = 1.3e-07, P = 1.3e-07
 Identities = 35/111 (31%), Positives = 62/111 (55%)

Query:   185 PKRIKFPKQHRGRM---TGKASRGNLICFGRYALQALEPAWIT--ARQIEAGRRAMVRNV 239
             P+  +  K  +GR+   TG + +GN + FG+  L+ L+   I   A Q++A  + + R +
Sbjct:    27 PRFKEVEKAQKGRVSVRTGGSIKGNSLEFGKIGLR-LKSQGIRMHANQLQAADKVLRREL 85

Query:   240 K-RGGKIWVRIFPDKPVTARPAETRMGSGKGSHAYWAAVVTPGKIIFEMSG 289
             +    K++ R   D  V  +  +TRMG GKG+  +WA+ +  GK++FE+ G
Sbjct:    86 RPTKSKLYTRFVCDLAVCIKGNQTRMGKGKGAFDHWASRMPTGKVLFEIDG 136


>ASPGD|ASPL0000002472 [details] [associations]
            symbol:mrpA species:162425 "Emericella nidulans"
            [GO:0003735 "structural constituent of ribosome" evidence=IEA]
            [GO:0005762 "mitochondrial large ribosomal subunit" evidence=IEA]
            [GO:0019843 "rRNA binding" evidence=IEA] [GO:0006412 "translation"
            evidence=IEA] InterPro:IPR000114 InterPro:IPR016180
            InterPro:IPR020798 Pfam:PF00252 PRINTS:PR00060 PROSITE:PS00701
            GO:GO:0006412 GO:GO:0005840 EMBL:BN001301 GO:GO:0003735
            GO:GO:0019843 PANTHER:PTHR12220 SUPFAM:SSF54686 TIGRFAMs:TIGR01164
            HOGENOM:HOG000164574 EnsemblFungi:CADANIAT00006687 OMA:GDYGLRM
            Uniprot:C8V190
        Length = 249

 Score = 128 (50.1 bits), Expect = 5.1e-06, P = 5.1e-06
 Identities = 37/138 (26%), Positives = 61/138 (44%)

Query:   185 PKRIKFPKQHRGRM---TGKASRGNLICFGRYALQALE-PAWITARQIEAGRRAMVRNVK 240
             PK  +  K  +GR    TG +SRG  + +G Y L+  +    + A  ++     + R ++
Sbjct:    64 PKMAETSKSPKGRPHVPTGGSSRGTTVVWGDYGLRMKDHDRRLPAASLKIAEETIKRRLR 123

Query:   241 -RGGKIWVRIFPDKPVTARPAETRMGSGKGSHAYWAAVVTPGKIIFEMSG-VPENXXXXX 298
                  ++ R+  +  V  +  E RMG GKG   YW A V   +I+FE+ G + E      
Sbjct:   124 GMNYTLYKRVSANIGVYTKGNEQRMGKGKGKFDYWTAKVAVSRIVFELKGDIHEKVAREA 183

Query:   299 XXXXXXXMPIKTQFVMSG 316
                    +P   +FV  G
Sbjct:   184 FRLAGHKLPGLWEFVNKG 201


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.319   0.133   0.388    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      323       286   0.00086  115 3  11 22  0.36    34
                                                     33  0.42    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  28
  No. of states in DFA:  609 (65 KB)
  Total size of DFA:  185 KB (2105 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  19.77u 0.09s 19.86t   Elapsed:  00:00:01
  Total cpu time:  19.77u 0.09s 19.86t   Elapsed:  00:00:01
  Start:  Tue May 21 01:40:49 2013   End:  Tue May 21 01:40:50 2013

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