RPOB protein (Arabidopsis thaliana)

STRING 9.05

RPOB protein (Arabidopsis thaliana) - STRING network view

This is the evidence view. Different line colors represent the types of evidence for the association.




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Your Input:
	RPOB	unknown protein; Chloroplast DNA-dependent RNA polymerase B subunit. The transcription of this gene is regulated by a nuclear encoded RNA polymerase. This gene has been transferred to mitochondrial genome during crucifer evolution. ; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (By similarity) (1072 aa)
		(Arabidopsis thaliana)
Predicted Functional Partners:
	RPOC1	unknown protein; RNA polymerase beta' subunit-1 ; DNA-dependent RNA polymerase catalyzes the tr [...] (680 aa)	•	•	•	•	•	•	0.999
	RPOA	unknown protein; RNA polymerase alpha subunit ; DNA-dependent RNA polymerase catalyzes the tran [...] (329 aa)	•		•	•	•	•	0.999
	ATCG00790.1-P	unknown protein; chloroplast gene encoding a ribosomal protein L16, which is a constituent of 5 [...] (135 aa)	•			•		•	0.995
	RPOC2	unknown protein; RNA polymerase beta' subunit-2 ; DNA-dependent RNA polymerase catalyzes the tr [...] (1376 aa)	•	•	•		•	•	0.991
	ATCG00800.1-P	unknown protein; encodes a chloroplast ribosomal protein S3, a constituent of the small subunit [...] (218 aa)	•			•	•	•	0.991
	RPL2.2	unknown protein; encodes a chloroplast ribosomal protein L2, a constituent of the large subunit [...] (274 aa)	•			•		•	0.988
	RPL2.1	unknown protein; encodes a chloroplast ribosomal protein L2, a constituent of the large subunit [...] (274 aa)	•			•		•	0.988
	TUFA	elongation factor Tu, putative / EF-Tu, putative; elongation factor Tu, putative / EF-Tu, putat [...] (454 aa)	•			•	•	•	0.985
	ATRABE1B	ATRABE1B (ARABIDOPSIS RAB GTPASE HOMOLOG E1B); GTP binding / GTPase/ translation elongation fac [...] (476 aa)	•			•	•	•	0.984
	AT3G13120	30S ribosomal protein S10, chloroplast, putative; 30S ribosomal protein S10, chloroplast, putat [...] (191 aa)	•			•	•	•	0.983

Views:

Info & Parameters ...

Network Display - Nodes are either colored (if they are directly linked to the input - as in the table) or white (nodes of a higher iteration/depth). Edges, i.e. predicted functional links, consist of up to eight lines: one color for each type of evidence. Hover or click to reveal more information about the node/edge.

Active Prediction Methods:

Neighborhood Gene Fusion Co-occurrence
Co-expression Experiments Databases Textmining

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