Query 045559
Match_columns 335
No_of_seqs 118 out of 1263
Neff 9.7
Searched_HMMs 29240
Date Mon Mar 25 05:12:56 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/045559.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/045559hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4asc_A Kelch repeat and BTB do 99.4 5.8E-12 2E-16 112.0 18.7 198 108-332 68-283 (315)
2 1zgk_A Kelch-like ECH-associat 99.4 9.1E-12 3.1E-16 110.5 18.0 196 107-333 90-294 (308)
3 2woz_A Kelch repeat and BTB do 99.4 8E-12 2.8E-16 111.3 17.6 196 109-332 80-293 (318)
4 2xn4_A Kelch-like protein 2; s 99.4 1.7E-11 5.7E-16 108.3 18.9 211 94-333 58-283 (302)
5 3ii7_A Kelch-like protein 7; p 99.4 9.7E-12 3.3E-16 110.1 16.5 215 92-333 50-279 (306)
6 2vpj_A Kelch-like protein 12; 99.4 1.6E-11 5.4E-16 108.4 17.7 210 93-333 58-285 (301)
7 4asc_A Kelch repeat and BTB do 99.3 1.9E-10 6.5E-15 102.2 20.7 207 106-333 12-228 (315)
8 3ii7_A Kelch-like protein 7; p 99.3 3.5E-11 1.2E-15 106.4 15.7 197 106-333 23-232 (306)
9 2vpj_A Kelch-like protein 12; 99.3 7.5E-11 2.6E-15 104.0 17.6 197 106-333 30-238 (301)
10 1zgk_A Kelch-like ECH-associat 99.3 3.6E-11 1.2E-15 106.5 15.5 201 106-333 38-247 (308)
11 2xn4_A Kelch-like protein 2; s 99.3 5.6E-11 1.9E-15 104.9 16.3 197 106-333 29-236 (302)
12 2woz_A Kelch repeat and BTB do 99.2 4.6E-10 1.6E-14 99.8 18.5 214 97-333 15-238 (318)
13 2uvk_A YJHT; unknown function, 99.2 5.5E-10 1.9E-14 100.9 16.2 218 95-333 17-301 (357)
14 2zwa_A Leucine carboxyl methyl 99.0 9.3E-09 3.2E-13 101.2 16.6 213 96-334 396-643 (695)
15 2uvk_A YJHT; unknown function, 98.9 1.1E-08 3.7E-13 92.3 13.7 152 170-332 167-348 (357)
16 2e31_A FBS1, F-box only protei 98.7 4.8E-09 1.6E-13 91.1 2.3 41 1-41 58-99 (297)
17 1fs1_A SKP2 F-BOX, cyclin A/CD 98.6 8.2E-09 2.8E-13 65.9 0.7 36 1-36 16-51 (53)
18 1k3i_A Galactose oxidase precu 98.5 1.9E-06 6.4E-11 84.3 15.8 201 108-333 220-504 (656)
19 2zwa_A Leucine carboxyl methyl 98.4 2E-06 6.8E-11 84.6 12.3 150 170-332 411-589 (695)
20 2ovr_B FBW7, F-BOX/WD repeat p 98.4 0.00043 1.5E-08 63.7 27.2 40 1-40 26-65 (445)
21 3v7d_B Cell division control p 98.4 0.00016 5.3E-09 66.9 23.8 39 1-39 22-61 (464)
22 1k3i_A Galactose oxidase precu 98.3 3.5E-06 1.2E-10 82.3 12.3 198 108-331 167-383 (656)
23 1p22_A F-BOX/WD-repeat protein 98.2 0.00033 1.1E-08 64.3 21.2 40 1-40 22-61 (435)
24 3l2o_B F-box only protein 4; s 97.1 0.00013 4.5E-09 62.7 1.9 42 1-42 12-53 (312)
25 2ast_B S-phase kinase-associat 95.5 0.0029 1E-07 55.8 0.8 33 1-33 16-48 (336)
26 3dsm_A Uncharacterized protein 95.4 1.2 4.1E-05 38.7 20.1 193 97-330 53-257 (328)
27 2hqs_A Protein TOLB; TOLB, PAL 95.2 1.7 5.8E-05 39.2 20.3 185 107-333 203-394 (415)
28 3mbr_X Glutamine cyclotransfer 95.2 1 3.4E-05 37.7 15.2 114 201-333 24-141 (243)
29 1l0q_A Surface layer protein; 94.4 2.5 8.4E-05 37.1 20.3 187 99-330 87-279 (391)
30 3nol_A Glutamine cyclotransfer 94.3 1.4 4.7E-05 37.3 13.9 112 203-333 49-163 (262)
31 1l0q_A Surface layer protein; 94.1 2.8 9.5E-05 36.8 19.9 188 95-329 40-236 (391)
32 2hqs_A Protein TOLB; TOLB, PAL 94.0 3.3 0.00011 37.3 18.3 184 107-332 159-350 (415)
33 2iwa_A Glutamine cyclotransfer 94.0 1.4 4.8E-05 37.4 13.6 109 207-333 32-143 (266)
34 2z2n_A Virginiamycin B lyase; 93.7 2.6 8.9E-05 35.2 19.3 188 95-330 107-299 (299)
35 1q7f_A NHL, brain tumor CG1071 93.5 2.9 9.9E-05 34.9 18.9 198 95-332 38-244 (286)
36 2p1m_B Transport inhibitor res 93.1 0.019 6.6E-07 54.7 0.4 27 1-27 13-40 (594)
37 3hfq_A Uncharacterized protein 92.8 4.1 0.00014 35.1 15.3 113 205-330 49-176 (347)
38 3dsm_A Uncharacterized protein 92.7 4.4 0.00015 35.0 22.5 195 97-330 2-216 (328)
39 3scy_A Hypothetical bacterial 92.7 2.7 9.4E-05 36.5 14.1 106 225-333 233-346 (361)
40 3q7m_A Lipoprotein YFGL, BAMB; 92.7 4.9 0.00017 35.2 17.0 133 171-329 198-340 (376)
41 3jro_A Fusion protein of prote 92.6 8.2 0.00028 37.7 19.2 66 260-327 169-239 (753)
42 3jrp_A Fusion protein of prote 92.6 4.6 0.00016 34.8 19.3 66 260-327 171-241 (379)
43 3ei3_B DNA damage-binding prot 92.4 5.2 0.00018 34.9 18.9 193 99-329 88-285 (383)
44 3e5z_A Putative gluconolactona 92.4 4.4 0.00015 34.1 22.1 199 99-332 42-252 (296)
45 3hfq_A Uncharacterized protein 92.2 5.2 0.00018 34.4 22.2 72 259-333 249-326 (347)
46 3ogk_B Coronatine-insensitive 92.2 0.041 1.4E-06 52.4 1.4 27 1-27 20-47 (592)
47 3bws_A Protein LP49; two-domai 91.4 7.2 0.00025 34.6 20.0 196 95-330 178-394 (433)
48 1rwi_B Serine/threonine-protei 91.4 5.1 0.00018 32.9 17.4 188 95-330 75-268 (270)
49 2ojh_A Uncharacterized protein 91.3 5.3 0.00018 32.8 16.5 198 95-332 50-264 (297)
50 4gga_A P55CDC, cell division c 91.3 7.7 0.00026 34.5 19.6 194 95-329 114-313 (420)
51 1ri6_A Putative isomerase YBHE 91.1 6.4 0.00022 33.3 20.4 70 260-332 241-316 (343)
52 3g4e_A Regucalcin; six bladed 90.6 7 0.00024 33.0 19.8 199 97-332 24-236 (297)
53 3q7m_A Lipoprotein YFGL, BAMB; 89.9 9.1 0.00031 33.4 14.6 112 201-329 48-165 (376)
54 3sjl_D Methylamine dehydrogena 89.7 5.1 0.00017 35.9 12.6 112 205-330 236-367 (386)
55 3nok_A Glutaminyl cyclase; bet 89.5 5 0.00017 33.9 11.6 111 201-333 58-172 (268)
56 3u4y_A Uncharacterized protein 88.9 9.9 0.00034 32.2 20.1 191 97-329 9-210 (331)
57 1ri6_A Putative isomerase YBHE 88.7 8.3 0.00028 32.6 13.1 97 226-330 61-165 (343)
58 1nir_A Nitrite reductase; hemo 88.3 17 0.00057 34.0 19.1 197 95-331 146-360 (543)
59 1pjx_A Dfpase, DIISOPROPYLFLUO 87.9 11 0.00037 31.6 19.2 193 105-328 44-258 (314)
60 3v65_B Low-density lipoprotein 87.5 15 0.00051 32.6 19.1 186 97-330 87-281 (386)
61 2mad_H Methylamine dehydrogena 87.1 11 0.00037 33.4 13.0 69 261-331 279-355 (373)
62 3v64_C Agrin; beta propeller, 85.7 17 0.00059 31.6 19.8 186 97-330 44-238 (349)
63 1qks_A Cytochrome CD1 nitrite 85.4 25 0.00085 33.1 20.6 194 97-330 166-377 (567)
64 3mbr_X Glutamine cyclotransfer 85.3 15 0.00051 30.5 15.5 136 170-331 42-184 (243)
65 3no2_A Uncharacterized protein 85.1 16 0.00054 30.6 16.9 188 98-329 6-198 (276)
66 2dg1_A DRP35, lactonase; beta 85.0 15 0.00051 31.2 12.6 115 205-332 54-177 (333)
67 2ojh_A Uncharacterized protein 84.5 15 0.00052 29.9 20.1 183 106-332 21-212 (297)
68 3vgz_A Uncharacterized protein 84.4 18 0.00061 30.7 22.9 199 97-330 100-307 (353)
69 1npe_A Nidogen, entactin; glyc 83.9 17 0.00057 29.9 19.7 191 96-333 46-246 (267)
70 3e5z_A Putative gluconolactona 83.8 18 0.00061 30.1 16.7 202 95-332 77-292 (296)
71 4aez_A CDC20, WD repeat-contai 83.5 22 0.00077 31.1 20.2 188 97-329 104-296 (401)
72 3pe7_A Oligogalacturonate lyas 82.8 20 0.00067 31.1 12.7 196 107-329 168-387 (388)
73 3v65_B Low-density lipoprotein 82.6 25 0.00087 31.1 15.7 103 206-327 213-319 (386)
74 1pby_B Quinohemoprotein amine 82.4 21 0.00071 29.9 16.5 91 226-329 220-313 (337)
75 2z2n_A Virginiamycin B lyase; 82.1 20 0.00068 29.5 19.3 190 95-332 65-260 (299)
76 4gqb_B Methylosome protein 50; 81.9 25 0.00084 30.4 18.4 198 95-331 91-294 (344)
77 3bws_A Protein LP49; two-domai 81.8 26 0.0009 30.8 19.8 181 106-325 233-431 (433)
78 3hrp_A Uncharacterized protein 81.5 9.6 0.00033 34.2 10.2 112 205-332 140-255 (409)
79 4e54_B DNA damage-binding prot 80.5 31 0.0011 30.7 14.5 192 99-328 134-329 (435)
80 1k8k_C P40, ARP2/3 complex 41 80.1 15 0.00053 31.3 10.9 97 225-328 30-129 (372)
81 3m0c_C LDL receptor, low-densi 80.1 48 0.0017 32.7 19.6 108 206-332 482-595 (791)
82 3scy_A Hypothetical bacterial 79.8 28 0.00097 29.8 15.1 71 259-332 164-248 (361)
83 2qc5_A Streptogramin B lactona 78.5 26 0.00091 28.7 17.3 182 96-325 113-299 (300)
84 3nol_A Glutamine cyclotransfer 78.4 29 0.00098 29.1 14.8 135 170-331 64-206 (262)
85 3vgz_A Uncharacterized protein 78.4 30 0.001 29.2 14.7 144 170-330 68-219 (353)
86 2p4o_A Hypothetical protein; p 77.8 31 0.001 29.1 13.0 105 205-327 41-148 (306)
87 3p5b_L Low density lipoprotein 77.7 38 0.0013 30.1 17.0 108 206-332 170-283 (400)
88 3iuj_A Prolyl endopeptidase; h 77.6 52 0.0018 31.6 20.7 139 171-332 259-411 (693)
89 1rwi_B Serine/threonine-protei 77.3 27 0.00094 28.2 18.4 188 95-331 32-227 (270)
90 4e54_B DNA damage-binding prot 77.2 39 0.0013 30.0 17.0 57 272-331 377-435 (435)
91 1gxr_A ESG1, transducin-like e 76.9 31 0.0011 28.7 21.9 197 95-331 60-260 (337)
92 2oiz_A Aromatic amine dehydrog 76.5 32 0.0011 30.0 11.9 64 261-327 266-335 (361)
93 1yfq_A Cell cycle arrest prote 76.1 34 0.0012 28.7 18.4 98 225-329 170-285 (342)
94 1ijq_A LDL receptor, low-densi 75.4 37 0.0013 28.9 18.8 183 100-331 4-200 (316)
95 2qc5_A Streptogramin B lactona 74.8 33 0.0011 28.1 19.0 189 95-332 70-265 (300)
96 3o4h_A Acylamino-acid-releasin 74.6 54 0.0019 30.4 16.1 191 98-332 123-320 (582)
97 1yr2_A Prolyl oligopeptidase; 73.7 67 0.0023 31.0 16.1 114 204-332 324-447 (741)
98 3v64_C Agrin; beta propeller, 73.7 44 0.0015 28.9 17.3 186 96-327 83-276 (349)
99 1jmx_B Amine dehydrogenase; ox 73.6 23 0.00079 29.8 10.0 94 225-329 21-137 (349)
100 2hz6_A Endoplasmic reticulum t 73.3 14 0.00047 32.5 8.6 25 96-120 8-32 (369)
101 3u4y_A Uncharacterized protein 72.6 41 0.0014 28.1 19.0 99 225-332 198-310 (331)
102 1r5m_A SIR4-interacting protei 71.7 49 0.0017 28.6 16.1 188 95-326 215-425 (425)
103 3jrp_A Fusion protein of prote 71.0 47 0.0016 28.1 21.0 68 261-331 221-293 (379)
104 3sov_A LRP-6, low-density lipo 70.8 50 0.0017 28.3 12.5 105 206-329 133-241 (318)
105 4g56_B MGC81050 protein; prote 70.7 51 0.0018 28.4 16.2 194 95-330 103-305 (357)
106 3nok_A Glutaminyl cyclase; bet 70.4 47 0.0016 27.9 13.9 132 173-331 77-215 (268)
107 3g4e_A Regucalcin; six bladed 70.4 46 0.0016 27.7 12.6 105 202-326 18-139 (297)
108 2z3z_A Dipeptidyl aminopeptida 69.5 78 0.0027 30.0 18.5 189 107-328 235-437 (706)
109 1q7f_A NHL, brain tumor CG1071 69.5 45 0.0015 27.3 22.4 188 95-326 86-280 (286)
110 3tc9_A Hypothetical hydrolase; 69.1 48 0.0017 29.8 11.4 107 206-329 149-260 (430)
111 1r5m_A SIR4-interacting protei 68.8 57 0.0019 28.1 20.6 95 225-330 227-323 (425)
112 2bkl_A Prolyl endopeptidase; m 68.2 85 0.0029 30.0 19.8 189 108-332 203-403 (695)
113 2aq5_A Coronin-1A; WD40 repeat 68.1 60 0.0021 28.2 20.2 197 99-328 96-301 (402)
114 2dg1_A DRP35, lactonase; beta 67.5 55 0.0019 27.5 20.7 208 95-333 53-270 (333)
115 4ggc_A P55CDC, cell division c 67.4 51 0.0018 27.1 19.8 67 95-182 34-100 (318)
116 1gxr_A ESG1, transducin-like e 67.3 53 0.0018 27.2 19.9 184 99-330 111-300 (337)
117 3azo_A Aminopeptidase; POP fam 66.9 85 0.0029 29.5 19.2 196 107-332 161-375 (662)
118 3hrp_A Uncharacterized protein 66.8 69 0.0024 28.4 20.5 200 95-332 139-360 (409)
119 3v9f_A Two-component system se 66.2 99 0.0034 30.0 19.2 197 96-332 372-574 (781)
120 3c75_H MADH, methylamine dehyd 66.2 76 0.0026 28.6 12.7 69 260-330 330-406 (426)
121 1kb0_A Quinohemoprotein alcoho 65.4 54 0.0018 31.5 11.5 113 201-329 72-202 (677)
122 2ad6_A Methanol dehydrogenase 65.4 56 0.0019 30.6 11.4 112 201-329 57-188 (571)
123 3sov_A LRP-6, low-density lipo 64.7 64 0.0022 27.6 10.9 107 206-329 46-157 (318)
124 1n7d_A LDL receptor, low-densi 64.3 36 0.0012 32.9 10.1 106 206-330 507-618 (699)
125 2ymu_A WD-40 repeat protein; u 64.1 87 0.003 28.6 20.7 94 226-331 408-503 (577)
126 4a11_B DNA excision repair pro 64.0 69 0.0024 27.4 18.3 31 299-329 337-368 (408)
127 3mmy_A MRNA export factor; mRN 63.5 57 0.002 27.4 10.5 68 261-331 54-122 (368)
128 3dr2_A Exported gluconolactona 62.8 66 0.0023 26.8 18.2 100 225-333 169-274 (305)
129 1n7d_A LDL receptor, low-densi 62.3 22 0.00075 34.5 8.1 110 205-331 463-576 (699)
130 4hw6_A Hypothetical protein, I 62.1 66 0.0022 28.9 10.9 111 201-329 142-262 (433)
131 3zwl_B Eukaryotic translation 61.9 70 0.0024 26.8 20.5 67 260-330 186-253 (369)
132 3mmy_A MRNA export factor; mRN 61.7 71 0.0024 26.8 18.7 58 272-329 237-307 (368)
133 4aez_A CDC20, WD repeat-contai 61.1 82 0.0028 27.3 20.1 97 225-330 284-384 (401)
134 3v9f_A Two-component system se 60.6 1.3E+02 0.0043 29.3 19.4 142 171-332 469-617 (781)
135 1kv9_A Type II quinohemoprotei 60.6 72 0.0025 30.6 11.4 113 201-329 61-190 (668)
136 3i2n_A WD repeat-containing pr 60.3 75 0.0025 26.6 17.1 66 260-327 270-354 (357)
137 3dr2_A Exported gluconolactona 59.2 43 0.0015 28.0 8.7 108 206-332 55-184 (305)
138 3odt_A Protein DOA1; ubiquitin 58.6 74 0.0025 26.0 20.4 94 225-330 205-300 (313)
139 1pby_B Quinohemoprotein amine 58.1 79 0.0027 26.1 12.2 98 225-330 11-128 (337)
140 2fp8_A Strictosidine synthase; 56.8 88 0.003 26.3 17.8 93 225-333 165-276 (322)
141 2iwa_A Glutamine cyclotransfer 56.8 86 0.0029 26.2 19.1 136 170-330 43-185 (266)
142 3dwl_C Actin-related protein 2 56.5 17 0.00059 31.3 5.8 97 226-328 34-133 (377)
143 3vl1_A 26S proteasome regulato 56.0 1E+02 0.0034 26.7 21.3 64 260-328 258-324 (420)
144 3mkq_A Coatomer beta'-subunit; 55.7 1.5E+02 0.005 28.5 22.1 188 96-329 65-262 (814)
145 2ecf_A Dipeptidyl peptidase IV 55.5 1.4E+02 0.0049 28.3 16.6 191 108-332 264-465 (741)
146 3lrv_A PRE-mRNA-splicing facto 55.3 95 0.0032 26.2 11.2 95 226-329 150-247 (343)
147 3jro_A Fusion protein of prote 54.6 1.5E+02 0.0052 28.6 12.8 95 226-327 32-133 (753)
148 2ghs_A AGR_C_1268P; regucalcin 54.5 98 0.0034 26.1 18.6 197 97-333 60-267 (326)
149 1yiq_A Quinohemoprotein alcoho 53.6 97 0.0033 29.8 11.0 115 201-329 65-195 (689)
150 2z3z_A Dipeptidyl aminopeptida 53.0 1.5E+02 0.0052 27.9 21.9 105 224-332 234-350 (706)
151 3vu4_A KMHSV2; beta-propeller 52.3 1.1E+02 0.0038 26.1 18.3 64 260-328 206-273 (355)
152 3k26_A Polycomb protein EED; W 52.2 1E+02 0.0035 25.7 16.5 64 261-326 299-366 (366)
153 1npe_A Nidogen, entactin; glyc 52.1 93 0.0032 25.2 16.4 156 138-330 38-202 (267)
154 4a11_B DNA excision repair pro 52.0 1.1E+02 0.0038 26.0 16.6 96 226-329 167-279 (408)
155 1k8k_C P40, ARP2/3 complex 41 51.6 1.1E+02 0.0037 25.7 19.5 68 260-329 153-236 (372)
156 3sre_A PON1, serum paraoxonase 50.4 1.3E+02 0.0044 26.3 15.8 201 97-325 60-297 (355)
157 2ghs_A AGR_C_1268P; regucalcin 49.8 1.2E+02 0.004 25.6 12.9 101 207-331 61-173 (326)
158 3fm0_A Protein CIAO1; WDR39,SG 49.6 1.2E+02 0.0041 25.7 12.9 69 260-330 116-185 (345)
159 1k32_A Tricorn protease; prote 49.4 2.2E+02 0.0075 28.7 16.8 50 273-328 589-639 (1045)
160 3v7d_B Cell division control p 49.0 1.4E+02 0.0048 26.3 22.1 27 95-121 171-197 (464)
161 3m0c_C LDL receptor, low-densi 48.9 2E+02 0.007 28.2 20.9 155 138-328 473-634 (791)
162 2pm9_A Protein WEB1, protein t 48.3 1.3E+02 0.0045 25.8 16.7 64 260-328 274-339 (416)
163 1sq9_A Antiviral protein SKI8; 45.9 1.4E+02 0.0048 25.4 17.0 55 272-329 206-270 (397)
164 1p22_A F-BOX/WD-repeat protein 45.2 1.6E+02 0.0054 25.8 17.9 181 98-327 184-366 (435)
165 1jmx_B Amine dehydrogenase; ox 45.1 1.2E+02 0.0041 25.2 9.3 65 260-330 10-78 (349)
166 4gqb_B Methylosome protein 50; 44.7 1.5E+02 0.005 25.3 11.7 59 272-330 102-162 (344)
167 3lrv_A PRE-mRNA-splicing facto 44.0 1.4E+02 0.0049 25.0 17.0 199 92-331 89-299 (343)
168 2ymu_A WD-40 repeat protein; u 43.4 1.9E+02 0.0065 26.2 20.7 94 226-331 326-421 (577)
169 1pgu_A Actin interacting prote 42.9 2E+02 0.0067 26.2 19.3 64 260-327 552-615 (615)
170 3no2_A Uncharacterized protein 42.6 1.4E+02 0.0049 24.5 15.4 141 170-332 14-161 (276)
171 2hes_X YDR267CP; beta-propelle 42.4 1.1E+02 0.0038 25.7 8.7 58 272-329 128-187 (330)
172 2p4o_A Hypothetical protein; p 41.3 1.5E+02 0.0052 24.6 20.7 193 96-328 41-244 (306)
173 3hxj_A Pyrrolo-quinoline quino 41.3 1.5E+02 0.0051 24.4 9.5 21 95-118 68-88 (330)
174 4a2l_A BT_4663, two-component 41.3 2.5E+02 0.0087 27.1 19.2 102 226-332 378-486 (795)
175 3f3f_A Nucleoporin SEH1; struc 41.1 1.5E+02 0.005 24.3 14.8 66 261-328 71-145 (351)
176 4aow_A Guanine nucleotide-bind 40.9 1.5E+02 0.0052 24.4 12.3 64 260-329 226-289 (340)
177 3dwl_C Actin-related protein 2 39.8 1.7E+02 0.0058 24.7 16.1 68 260-329 216-284 (377)
178 1w6s_A Methanol dehydrogenase 39.6 2.5E+02 0.0085 26.5 11.5 113 201-329 57-194 (599)
179 4aow_A Guanine nucleotide-bind 39.6 1.6E+02 0.0054 24.2 18.4 30 299-328 309-339 (340)
180 3odt_A Protein DOA1; ubiquitin 39.0 1.5E+02 0.0052 23.9 21.7 63 260-329 154-217 (313)
181 2vdu_B TRNA (guanine-N(7)-)-me 38.5 2E+02 0.007 25.2 21.1 64 261-329 210-274 (450)
182 2fp8_A Strictosidine synthase; 38.2 1.7E+02 0.006 24.3 12.1 54 225-282 260-313 (322)
183 2hz6_A Endoplasmic reticulum t 37.8 7.2 0.00025 34.4 0.1 27 201-236 4-30 (369)
184 3gre_A Serine/threonine-protei 37.6 2E+02 0.0069 24.9 11.5 97 225-329 192-295 (437)
185 3sfz_A APAF-1, apoptotic pepti 37.4 3.5E+02 0.012 27.6 18.9 188 95-329 624-831 (1249)
186 3k26_A Polycomb protein EED; W 37.2 1.8E+02 0.0061 24.1 16.4 66 261-328 241-320 (366)
187 1evh_A WH1 domain, protein (ME 37.1 39 0.0013 24.1 4.0 43 106-156 10-52 (112)
188 1ddw_A GLGF-domain protein hom 36.6 41 0.0014 24.4 4.1 40 106-155 10-50 (120)
189 3dm0_A Maltose-binding peripla 35.8 2.5E+02 0.0087 26.4 10.9 93 226-330 542-636 (694)
190 1nir_A Nitrite reductase; hemo 35.3 2.7E+02 0.0092 25.6 20.8 101 225-329 346-461 (543)
191 3amr_A 3-phytase; beta-propell 35.0 2.3E+02 0.0079 24.8 20.5 199 93-329 36-267 (355)
192 2dk7_A Transcription elongatio 34.5 38 0.0013 22.2 3.1 19 310-328 23-41 (73)
193 3mkq_A Coatomer beta'-subunit; 33.8 3.2E+02 0.011 26.0 20.1 95 225-329 119-220 (814)
194 4h5i_A Guanine nucleotide-exch 33.2 2.3E+02 0.0078 24.2 18.4 63 260-327 280-344 (365)
195 2crf_A RAN binding protein 3; 33.0 29 0.00098 26.4 2.8 28 307-335 25-52 (150)
196 1egx_A VAsp, vasodilator-stimu 33.0 53 0.0018 23.6 4.1 44 106-156 10-53 (115)
197 1jof_A Carboxy-CIS,CIS-muconat 33.0 2.3E+02 0.0077 24.1 12.9 99 226-331 168-297 (365)
198 4gga_A P55CDC, cell division c 32.7 2.5E+02 0.0084 24.4 11.2 57 272-329 124-181 (420)
199 3s3x_D Psalmotoxin-1; acid-sen 32.6 19 0.00067 19.0 1.2 23 93-116 14-36 (37)
200 4hvt_A Ritya.17583.B, post-pro 32.5 2.5E+02 0.0087 27.1 10.1 122 203-331 296-434 (711)
201 4ggc_A P55CDC, cell division c 32.2 2E+02 0.0069 23.2 10.1 58 272-330 44-102 (318)
202 3kvp_A Uncharacterized protein 32.1 29 0.001 22.2 2.2 25 307-331 29-54 (72)
203 3f3f_A Nucleoporin SEH1; struc 32.0 2.1E+02 0.007 23.3 22.5 34 299-332 309-344 (351)
204 3ow8_A WD repeat-containing pr 31.9 2.2E+02 0.0076 23.7 9.4 66 261-329 48-114 (321)
205 4a0p_A LRP6, LRP-6, low-densit 31.7 3.4E+02 0.012 25.7 20.6 183 99-329 8-200 (628)
206 3fvz_A Peptidyl-glycine alpha- 31.2 2.3E+02 0.0079 23.6 21.6 147 107-288 69-232 (329)
207 1ijq_A LDL receptor, low-densi 31.1 2.3E+02 0.008 23.7 20.2 187 96-328 40-240 (316)
208 3ow8_A WD repeat-containing pr 30.2 2.4E+02 0.0081 23.5 20.1 93 226-329 187-282 (321)
209 1jof_A Carboxy-CIS,CIS-muconat 29.8 2.6E+02 0.0088 23.7 15.3 73 259-331 264-346 (365)
210 3sfz_A APAF-1, apoptotic pepti 29.7 4.6E+02 0.016 26.6 19.0 65 260-329 809-874 (1249)
211 1rrp_B Nuclear pore complex pr 29.5 28 0.00095 25.8 2.2 26 309-335 22-47 (134)
212 1mda_H Methylamine dehydrogena 29.2 2.9E+02 0.0098 24.1 10.0 107 206-331 222-351 (368)
213 4ery_A WD repeat-containing pr 28.9 2.4E+02 0.0081 23.0 20.9 94 226-329 130-226 (312)
214 1got_B GT-beta; complex (GTP-b 28.6 2.6E+02 0.0088 23.4 15.5 68 260-329 108-176 (340)
215 1flg_A Protein (quinoprotein e 28.3 3.7E+02 0.013 25.1 11.9 115 201-329 63-196 (582)
216 1i2h_A PSD-ZIP45(homer-1C/VESL 27.7 66 0.0023 24.9 4.1 41 106-156 15-56 (168)
217 2ovr_B FBW7, F-BOX/WD repeat p 27.7 3E+02 0.01 23.9 22.8 95 226-327 340-443 (445)
218 3gre_A Serine/threonine-protei 27.6 3E+02 0.01 23.8 9.7 65 260-329 181-248 (437)
219 1sq9_A Antiviral protein SKI8; 27.1 2.8E+02 0.0097 23.3 21.6 98 225-328 258-397 (397)
220 2ece_A 462AA long hypothetical 26.7 3.6E+02 0.012 24.5 10.7 98 224-325 227-351 (462)
221 3tc9_A Hypothetical hydrolase; 26.3 3.4E+02 0.012 24.0 17.3 196 96-331 148-375 (430)
222 3c5m_A Oligogalacturonate lyas 25.4 3E+02 0.01 23.1 17.3 192 106-335 167-393 (396)
223 1erj_A Transcriptional repress 25.4 3.2E+02 0.011 23.4 22.3 197 95-329 132-344 (393)
224 4a2l_A BT_4663, two-component 25.3 4.6E+02 0.016 25.2 22.0 204 95-332 223-442 (795)
225 3ju4_A Endo-N-acetylneuraminid 25.3 2.9E+02 0.01 24.9 8.1 63 203-270 345-407 (670)
226 1nr0_A Actin interacting prote 25.1 2.4E+02 0.0082 26.2 8.5 63 260-326 459-522 (611)
227 3s94_A LRP-6, low-density lipo 24.8 4.4E+02 0.015 24.8 19.7 188 99-331 11-207 (619)
228 4g56_B MGC81050 protein; prote 24.7 3.2E+02 0.011 23.1 18.6 90 226-327 250-344 (357)
229 3sjl_D Methylamine dehydrogena 24.6 1.3E+02 0.0045 26.6 6.1 52 276-330 60-122 (386)
230 2be1_A Serine/threonine-protei 24.1 2.7E+02 0.0091 24.1 7.9 23 307-329 111-133 (339)
231 2vdu_B TRNA (guanine-N(7)-)-me 23.9 3.6E+02 0.012 23.5 22.4 68 260-330 318-397 (450)
232 3zwl_B Eukaryotic translation 23.4 3.1E+02 0.011 22.5 20.2 93 225-329 197-307 (369)
233 3vl1_A 26S proteasome regulato 23.4 3.4E+02 0.012 23.0 18.2 95 225-326 313-419 (420)
234 1yfq_A Cell cycle arrest prote 22.9 3.1E+02 0.011 22.4 19.0 55 272-327 169-226 (342)
235 3fm0_A Protein CIAO1; WDR39,SG 22.3 3.4E+02 0.012 22.6 19.5 62 260-324 161-223 (345)
236 1got_B GT-beta; complex (GTP-b 21.8 3.5E+02 0.012 22.5 20.7 92 226-328 165-259 (340)
237 3bg1_A Protein SEC13 homolog; 21.5 3.4E+02 0.012 22.3 18.0 60 272-332 237-300 (316)
238 2ecf_A Dipeptidyl peptidase IV 21.3 5.1E+02 0.018 24.3 21.7 103 225-332 263-374 (741)
239 2jp2_A Spred-2, sprouty-relate 21.2 1.1E+02 0.0036 22.4 4.0 44 106-156 19-65 (126)
240 2lyd_A Decapping protein 1; DC 20.9 52 0.0018 24.4 2.2 26 309-334 30-55 (134)
241 1e0n_A Hypothetical protein; Y 20.9 94 0.0032 15.7 2.6 17 313-329 6-22 (27)
242 1pgu_A Actin interacting prote 20.7 4.7E+02 0.016 23.6 18.8 65 260-329 171-241 (615)
243 1qks_A Cytochrome CD1 nitrite 20.6 5.1E+02 0.018 24.0 13.8 96 224-330 176-279 (567)
244 2w18_A PALB2, fancn, partner a 20.6 4.3E+02 0.015 23.1 8.5 30 262-293 54-83 (356)
245 3h6j_A Neuraminidase, sialidas 20.3 3.5E+02 0.012 22.0 8.6 92 201-292 27-120 (438)
246 4hat_B RAN-specific GTPase-act 20.2 60 0.002 24.2 2.5 27 308-335 22-48 (140)
No 1
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=99.44 E-value=5.8e-12 Score=112.04 Aligned_cols=198 Identities=11% Similarity=0.059 Sum_probs=131.2
Q ss_pred eEEEEecchhhhhcCCCCcccCCcCCceeeeeEEeecCCCCCeEEEEEEEEecCccccccCCCceEEEEEcCCCcceecC
Q 045559 108 EIALYNHATRDLKFLPKLTLIDNLESIYTIMFGLGLDPKCNYYKLVYIVTYHDSELGKVLNDSRQVFIYSFSDNSWRNFQ 187 (335)
Q Consensus 108 ~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~l~~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~~~vyss~~~~W~~~~ 187 (335)
.++++||.|++|..+|+++.. .. ..+.... .+ +++.+....... .......+++|+..+++|+.++
T Consensus 68 ~~~~~d~~~~~W~~~~~~p~~-----r~--~~~~~~~--~~--~lyv~GG~~~~~---~~~~~~~~~~~d~~~~~W~~~~ 133 (315)
T 4asc_A 68 YFLQFDHLDSEWLGMPPLPSP-----RC--LFGLGEA--LN--SIYVVGGREIKD---GERCLDSVMCYDRLSFKWGESD 133 (315)
T ss_dssp EEEEEETTTTEEEECCCBSSC-----EE--SCEEEEE--TT--EEEEECCEESST---TCCBCCCEEEEETTTTEEEECC
T ss_pred ceEEecCCCCeEEECCCCCcc-----hh--ceeEEEE--CC--EEEEEeCCcCCC---CCcccceEEEECCCCCcEeECC
Confidence 388999999999999887755 11 1111111 12 333332211100 0233567999999999999998
Q ss_pred cccccccccCCCceeeeecceEEEEeecCCCCCccCceEEEEEECCccceeee-cCCCccccCCCCeeEEEEeCCeEEEE
Q 045559 188 GFEFGMYDLDEVLDCTYHNGACHWLVPFGAFHPLCCHYVILSFDMSDEVFEEI-LGPNCLLEISPKHTVFGLYNDSLSFL 266 (335)
Q Consensus 188 ~~p~~~~~~~~~~~~v~~~G~~ywl~~~~~~~~~~~~~~i~~fD~~~e~~~~i-~~P~~~~~~~~~~~~l~~~~g~L~~~ 266 (335)
.+|.+...+ ..+.++|.+|.+....... .....+..||+.+++|+.+ ++|... .....+..+|+|+++
T Consensus 134 ~~p~~r~~~----~~~~~~~~iyv~GG~~~~~--~~~~~~~~yd~~~~~W~~~~~~p~~r-----~~~~~~~~~~~iyv~ 202 (315)
T 4asc_A 134 PLPYVVYGH----TVLSHMDLVYVIGGKGSDR--KCLNKMCVYDPKKFEWKELAPMQTAR-----SLFGATVHDGRIIVA 202 (315)
T ss_dssp CCSSCCBSC----EEEEETTEEEEECCBCTTS--CBCCCEEEEETTTTEEEECCCCSSCC-----BSCEEEEETTEEEEE
T ss_pred CCCCcccce----eEEEECCEEEEEeCCCCCC--cccceEEEEeCCCCeEEECCCCCCch-----hceEEEEECCEEEEE
Confidence 776665544 3788999999998762211 0134799999999999998 555533 344577889999999
Q ss_pred EecCCC-CEEEEEEECC-CCceeEEEEeccCCceeeeEEEeeCCEEEEEecC---------------CeEEEEeCCCCce
Q 045559 267 VFDERE-SCFDIWTMKE-RYHWTKEFSTTPILAVDAPIGFWKNDTFFIRSNT---------------EELLLYDPNSEEI 329 (335)
Q Consensus 267 ~~~~~~-~~~~IW~l~~-~~~W~~~~~i~~~~~~~~~~~~~~~~~il~~~~~---------------~~l~~yd~~~~~~ 329 (335)
+..... ..-++|+++. ...|..+..+ |.+.......+ -+++|++..+. ..+..||+++++|
T Consensus 203 GG~~~~~~~~~~~~yd~~~~~W~~~~~~-p~~r~~~~~~~-~~~~l~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~W 280 (315)
T 4asc_A 203 AGVTDTGLTSSAEVYSITDNKWAPFEAF-PQERSSLSLVS-LVGTLYAIGGFATLETESGELVPTELNDIWRYNEEEKKW 280 (315)
T ss_dssp EEECSSSEEEEEEEEETTTTEEEEECCC-SSCCBSCEEEE-ETTEEEEEEEEEEEECTTSCEEEEEEEEEEEEETTTTEE
T ss_pred eccCCCCccceEEEEECCCCeEEECCCC-CCcccceeEEE-ECCEEEEECCccccCcCCccccccccCcEEEecCCCChh
Confidence 886422 2446788877 6899987655 54433333332 36787765431 3489999999999
Q ss_pred eec
Q 045559 330 IDF 332 (335)
Q Consensus 330 ~~v 332 (335)
+++
T Consensus 281 ~~~ 283 (315)
T 4asc_A 281 EGV 283 (315)
T ss_dssp EEE
T ss_pred hhh
Confidence 986
No 2
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=99.42 E-value=9.1e-12 Score=110.47 Aligned_cols=196 Identities=9% Similarity=0.018 Sum_probs=129.7
Q ss_pred ceEEEEecchhhhhcCCCCcccCCcCCceeeeeEEeecCCCCCeEEEEEEEEecCccccccCCCceEEEEEcCCCcceec
Q 045559 107 DEIALYNHATRDLKFLPKLTLIDNLESIYTIMFGLGLDPKCNYYKLVYIVTYHDSELGKVLNDSRQVFIYSFSDNSWRNF 186 (335)
Q Consensus 107 ~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~l~~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~~~vyss~~~~W~~~ 186 (335)
..++++||.|++|..+|+++.. +....... ++ + +++.+..... ......+++|+..+++|+.+
T Consensus 90 ~~~~~~d~~~~~W~~~~~~p~~----r~~~~~~~--~~---~--~iyv~GG~~~------~~~~~~~~~yd~~~~~W~~~ 152 (308)
T 1zgk_A 90 SALDCYNPMTNQWSPCAPMSVP----RNRIGVGV--ID---G--HIYAVGGSHG------CIHHNSVERYEPERDEWHLV 152 (308)
T ss_dssp CCEEEEETTTTEEEECCCCSSC----CBTCEEEE--ET---T--EEEEECCEET------TEECCCEEEEETTTTEEEEC
T ss_pred ceEEEECCCCCeEeECCCCCcC----ccccEEEE--EC---C--EEEEEcCCCC------CcccccEEEECCCCCeEeEC
Confidence 4689999999999999977654 11111111 11 2 3333322111 11245799999999999999
Q ss_pred CcccccccccCCCceeeeecceEEEEeecCCCCCccCceEEEEEECCccceeee-cCCCccccCCCCeeEEEEeCCeEEE
Q 045559 187 QGFEFGMYDLDEVLDCTYHNGACHWLVPFGAFHPLCCHYVILSFDMSDEVFEEI-LGPNCLLEISPKHTVFGLYNDSLSF 265 (335)
Q Consensus 187 ~~~p~~~~~~~~~~~~v~~~G~~ywl~~~~~~~~~~~~~~i~~fD~~~e~~~~i-~~P~~~~~~~~~~~~l~~~~g~L~~ 265 (335)
+.+|.+...+ ..+.++|.+|.+....... ....+..||+.+++|+.+ ++|... .....+..+|+|++
T Consensus 153 ~~~p~~r~~~----~~~~~~~~iyv~GG~~~~~---~~~~~~~yd~~~~~W~~~~~~p~~r-----~~~~~~~~~~~iyv 220 (308)
T 1zgk_A 153 APMLTRRIGV----GVAVLNRLLYAVGGFDGTN---RLNSAECYYPERNEWRMITAMNTIR-----SGAGVCVLHNCIYA 220 (308)
T ss_dssp CCCSSCCBSC----EEEEETTEEEEECCBCSSC---BCCCEEEEETTTTEEEECCCCSSCC-----BSCEEEEETTEEEE
T ss_pred CCCCccccce----EEEEECCEEEEEeCCCCCC---cCceEEEEeCCCCeEeeCCCCCCcc-----ccceEEEECCEEEE
Confidence 8766654444 3788899999998654321 034699999999999998 555433 23456778999999
Q ss_pred EEecCC-CCEEEEEEECC-CCceeEEEEeccCCceeeeEEEeeCCEEEEEec------CCeEEEEeCCCCceeecc
Q 045559 266 LVFDER-ESCFDIWTMKE-RYHWTKEFSTTPILAVDAPIGFWKNDTFFIRSN------TEELLLYDPNSEEIIDFQ 333 (335)
Q Consensus 266 ~~~~~~-~~~~~IW~l~~-~~~W~~~~~i~~~~~~~~~~~~~~~~~il~~~~------~~~l~~yd~~~~~~~~v~ 333 (335)
+..... ...-++|+++. ...|.++..+ |.+....-..+ -+++|++..+ ...+..||+++++|+++.
T Consensus 221 ~GG~~~~~~~~~v~~yd~~~~~W~~~~~~-p~~r~~~~~~~-~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~ 294 (308)
T 1zgk_A 221 AGGYDGQDQLNSVERYDVETETWTFVAPM-KHRRSALGITV-HQGRIYVLGGYDGHTFLDSVECYDPDTDTWSEVT 294 (308)
T ss_dssp ECCBCSSSBCCCEEEEETTTTEEEECCCC-SSCCBSCEEEE-ETTEEEEECCBCSSCBCCEEEEEETTTTEEEEEE
T ss_pred EeCCCCCCccceEEEEeCCCCcEEECCCC-CCCccceEEEE-ECCEEEEEcCcCCCcccceEEEEcCCCCEEeecC
Confidence 987631 12345666665 6899987655 54433222232 3778877753 346999999999999863
No 3
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=99.41 E-value=8e-12 Score=111.28 Aligned_cols=196 Identities=11% Similarity=0.131 Sum_probs=129.3
Q ss_pred EEEEecchhhhhcCCCCcccCCcCCceeeeeEEeecCCCCCeEEEEEEEEecCccccccCCCceEEEEEcCCCcceecCc
Q 045559 109 IALYNHATRDLKFLPKLTLIDNLESIYTIMFGLGLDPKCNYYKLVYIVTYHDSELGKVLNDSRQVFIYSFSDNSWRNFQG 188 (335)
Q Consensus 109 ~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~l~~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~~~vyss~~~~W~~~~~ 188 (335)
++++||.|++|..+|+++.. .. ..++... .+ +++.+....... ......+++|+..+++|+.++.
T Consensus 80 ~~~~d~~~~~W~~~~~~p~~-----r~--~~~~~~~--~~--~iyv~GG~~~~~----~~~~~~~~~yd~~~~~W~~~~~ 144 (318)
T 2woz_A 80 FFQLDNVSSEWVGLPPLPSA-----RC--LFGLGEV--DD--KIYVVAGKDLQT----EASLDSVLCYDPVAAKWSEVKN 144 (318)
T ss_dssp EEEEETTTTEEEECSCBSSC-----BC--SCEEEEE--TT--EEEEEEEEBTTT----CCEEEEEEEEETTTTEEEEECC
T ss_pred EEEEeCCCCcEEECCCCCcc-----cc--ccceEEE--CC--EEEEEcCccCCC----CcccceEEEEeCCCCCEeECCC
Confidence 78999999999999877665 11 1112211 12 333333211110 1224579999999999999987
Q ss_pred ccccccccCCCceeeeecceEEEEeecCCCCCccCceEEEEEECCccceeee-cCCCccccCCCCeeEEEEeCCeEEEEE
Q 045559 189 FEFGMYDLDEVLDCTYHNGACHWLVPFGAFHPLCCHYVILSFDMSDEVFEEI-LGPNCLLEISPKHTVFGLYNDSLSFLV 267 (335)
Q Consensus 189 ~p~~~~~~~~~~~~v~~~G~~ywl~~~~~~~~~~~~~~i~~fD~~~e~~~~i-~~P~~~~~~~~~~~~l~~~~g~L~~~~ 267 (335)
+|.+...+. .+.++|.+|.+....... .....+..||+.+++|+.+ ++|... .....+..+|+|++++
T Consensus 145 ~p~~r~~~~----~~~~~~~iyv~GG~~~~~--~~~~~~~~yd~~~~~W~~~~~~p~~r-----~~~~~~~~~~~iyv~G 213 (318)
T 2woz_A 145 LPIKVYGHN----VISHNGMIYCLGGKTDDK--KCTNRVFIYNPKKGDWKDLAPMKTPR-----SMFGVAIHKGKIVIAG 213 (318)
T ss_dssp CSSCEESCE----EEEETTEEEEECCEESSS--CBCCCEEEEETTTTEEEEECCCSSCC-----BSCEEEEETTEEEEEE
T ss_pred CCCcccccE----EEEECCEEEEEcCCCCCC--CccceEEEEcCCCCEEEECCCCCCCc-----ccceEEEECCEEEEEc
Confidence 776655443 788999999998642110 0134699999999999999 555433 2335678899999998
Q ss_pred ecCCC-CEEEEEEECC-CCceeEEEEeccCCceeeeEEEeeCCEEEEEec---------------CCeEEEEeCCCCcee
Q 045559 268 FDERE-SCFDIWTMKE-RYHWTKEFSTTPILAVDAPIGFWKNDTFFIRSN---------------TEELLLYDPNSEEII 330 (335)
Q Consensus 268 ~~~~~-~~~~IW~l~~-~~~W~~~~~i~~~~~~~~~~~~~~~~~il~~~~---------------~~~l~~yd~~~~~~~ 330 (335)
..... ..-++|+++. ...|.++..+ |.+.....+. .-+++|++..+ ...+..||+++++|+
T Consensus 214 G~~~~~~~~~~~~yd~~~~~W~~~~~~-p~~r~~~~~~-~~~~~i~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~ 291 (318)
T 2woz_A 214 GVTEDGLSASVEAFDLKTNKWEVMTEF-PQERSSISLV-SLAGSLYAIGGFAMIQLESKEFAPTEVNDIWKYEDDKKEWA 291 (318)
T ss_dssp EEETTEEEEEEEEEETTTCCEEECCCC-SSCCBSCEEE-EETTEEEEECCBCCBC----CCBCCBCCCEEEEETTTTEEE
T ss_pred CcCCCCccceEEEEECCCCeEEECCCC-CCcccceEEE-EECCEEEEECCeeccCCCCceeccceeeeEEEEeCCCCEeh
Confidence 76422 2346777776 6899987666 5443333333 33678877643 246899999999999
Q ss_pred ec
Q 045559 331 DF 332 (335)
Q Consensus 331 ~v 332 (335)
++
T Consensus 292 ~~ 293 (318)
T 2woz_A 292 GM 293 (318)
T ss_dssp EE
T ss_pred hh
Confidence 86
No 4
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=99.40 E-value=1.7e-11 Score=108.29 Aligned_cols=211 Identities=10% Similarity=0.092 Sum_probs=135.8
Q ss_pred ccccceEEEeec------CceEEEEecchhhhhcCCCCcccCCcCCceeeeeEEeecCCCCCeEEEEEEEEecCcccccc
Q 045559 94 GPFEGLFIMFIG------GDEIALYNHATRDLKFLPKLTLIDNLESIYTIMFGLGLDPKCNYYKLVYIVTYHDSELGKVL 167 (335)
Q Consensus 94 ~s~~GLl~~~~~------~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~l~~d~~~~~ykVv~~~~~~~~~~~~~~ 167 (335)
...+|.|.+..+ ...+.++||.|++|..+|+++.. +....... ++ + +++.+... .. .
T Consensus 58 ~~~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~----r~~~~~~~--~~---~--~iyv~GG~-~~-----~ 120 (302)
T 2xn4_A 58 VYMAGLVFAVGGFNGSLRVRTVDSYDPVKDQWTSVANMRDR----RSTLGAAV--LN---G--LLYAVGGF-DG-----S 120 (302)
T ss_dssp EEETTEEEEESCBCSSSBCCCEEEEETTTTEEEEECCCSSC----CBSCEEEE--ET---T--EEEEEEEE-CS-----S
T ss_pred EEECCEEEEEeCcCCCccccceEEECCCCCceeeCCCCCcc----ccceEEEE--EC---C--EEEEEcCC-CC-----C
Confidence 344665555431 35689999999999999977654 11111111 11 2 33333221 11 1
Q ss_pred CCCceEEEEEcCCCcceecCcccccccccCCCceeeeecceEEEEeecCCCCCccCceEEEEEECCccceeee-cCCCcc
Q 045559 168 NDSRQVFIYSFSDNSWRNFQGFEFGMYDLDEVLDCTYHNGACHWLVPFGAFHPLCCHYVILSFDMSDEVFEEI-LGPNCL 246 (335)
Q Consensus 168 ~~~~~~~vyss~~~~W~~~~~~p~~~~~~~~~~~~v~~~G~~ywl~~~~~~~~~~~~~~i~~fD~~~e~~~~i-~~P~~~ 246 (335)
.....+++|+..++.|+.++.+|.+...+ ..+.++|.+|.+........ .....+..||+.+++|+.+ ++|...
T Consensus 121 ~~~~~~~~~d~~~~~W~~~~~~p~~r~~~----~~~~~~~~iyv~GG~~~~~~-~~~~~~~~yd~~~~~W~~~~~~p~~r 195 (302)
T 2xn4_A 121 TGLSSVEAYNIKSNEWFHVAPMNTRRSSV----GVGVVGGLLYAVGGYDVASR-QCLSTVECYNATTNEWTYIAEMSTRR 195 (302)
T ss_dssp CEEEEEEEEETTTTEEEEECCCSSCCBSC----EEEEETTEEEEECCEETTTT-EECCCEEEEETTTTEEEEECCCSSCC
T ss_pred ccCceEEEEeCCCCeEeecCCCCCcccCc----eEEEECCEEEEEeCCCCCCC-ccccEEEEEeCCCCcEEECCCCcccc
Confidence 22357899999999999998766654444 37889999999975432100 0023689999999999999 555433
Q ss_pred ccCCCCeeEEEEeCCeEEEEEecCCC-CEEEEEEECC-CCceeEEEEeccCCceeeeEEEeeCCEEEEEec------CCe
Q 045559 247 LEISPKHTVFGLYNDSLSFLVFDERE-SCFDIWTMKE-RYHWTKEFSTTPILAVDAPIGFWKNDTFFIRSN------TEE 318 (335)
Q Consensus 247 ~~~~~~~~~l~~~~g~L~~~~~~~~~-~~~~IW~l~~-~~~W~~~~~i~~~~~~~~~~~~~~~~~il~~~~------~~~ 318 (335)
....++..+|+|+++...... ..-++|+++. ...|..+..+ |.......+. .-+++|++..+ ...
T Consensus 196 -----~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~-~~~r~~~~~~-~~~~~i~v~GG~~~~~~~~~ 268 (302)
T 2xn4_A 196 -----SGAGVGVLNNLLYAVGGHDGPLVRKSVEVYDPTTNAWRQVADM-NMCRRNAGVC-AVNGLLYVVGGDDGSCNLAS 268 (302)
T ss_dssp -----BSCEEEEETTEEEEECCBSSSSBCCCEEEEETTTTEEEEECCC-SSCCBSCEEE-EETTEEEEECCBCSSSBCCC
T ss_pred -----ccccEEEECCEEEEECCCCCCcccceEEEEeCCCCCEeeCCCC-CCccccCeEE-EECCEEEEECCcCCCccccc
Confidence 234577889999999876421 1235677766 6899987655 4443322233 33788887754 245
Q ss_pred EEEEeCCCCceeecc
Q 045559 319 LLLYDPNSEEIIDFQ 333 (335)
Q Consensus 319 l~~yd~~~~~~~~v~ 333 (335)
+..||+++++|+++.
T Consensus 269 v~~yd~~~~~W~~~~ 283 (302)
T 2xn4_A 269 VEYYNPTTDKWTVVS 283 (302)
T ss_dssp EEEEETTTTEEEECS
T ss_pred EEEEcCCCCeEEECC
Confidence 999999999999874
No 5
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=99.39 E-value=9.7e-12 Score=110.05 Aligned_cols=215 Identities=9% Similarity=-0.034 Sum_probs=137.9
Q ss_pred ccccccceEEEeec-----CceEEEEecchhhhhcCCCCcccCCcCCceeeeeEEeecCCCCCeEEEEEEEEecCccccc
Q 045559 92 FRGPFEGLFIMFIG-----GDEIALYNHATRDLKFLPKLTLIDNLESIYTIMFGLGLDPKCNYYKLVYIVTYHDSELGKV 166 (335)
Q Consensus 92 ~~~s~~GLl~~~~~-----~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~l~~d~~~~~ykVv~~~~~~~~~~~~~ 166 (335)
.....+|.|.+..+ ...+.++||.|++|..+|+++.. +...... .++ + +++.+......
T Consensus 50 ~~~~~~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~----r~~~~~~--~~~---~--~iyv~GG~~~~----- 113 (306)
T 3ii7_A 50 ACVFWDNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPPTP----RDSLAAC--AAE---G--KIYTSGGSEVG----- 113 (306)
T ss_dssp EEEEETTEEEEECCBSSSBCCEEEEEETTTTEEEEEECCSSC----CBSCEEE--EET---T--EEEEECCBBTT-----
T ss_pred EEEEECCEEEEEeCCCCCCcceEEEEeCCCCeEEECCCCCcc----ccceeEE--EEC---C--EEEEECCCCCC-----
Confidence 33445666555432 46789999999999999887654 1111111 111 2 34333221001
Q ss_pred cCCCceEEEEEcCCCcceecCcccccccccCCCceeeeecceEEEEeecCCCCC-ccCceEEEEEECCccceeee-cCCC
Q 045559 167 LNDSRQVFIYSFSDNSWRNFQGFEFGMYDLDEVLDCTYHNGACHWLVPFGAFHP-LCCHYVILSFDMSDEVFEEI-LGPN 244 (335)
Q Consensus 167 ~~~~~~~~vyss~~~~W~~~~~~p~~~~~~~~~~~~v~~~G~~ywl~~~~~~~~-~~~~~~i~~fD~~~e~~~~i-~~P~ 244 (335)
......+++|+..+++|+.++.+|.+...+ ..+.++|.+|.+........ ......+..||+++++|+.+ ++|.
T Consensus 114 ~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~----~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~ 189 (306)
T 3ii7_A 114 NSALYLFECYDTRTESWHTKPSMLTQRCSH----GMVEANGLIYVCGGSLGNNVSGRVLNSCEVYDPATETWTELCPMIE 189 (306)
T ss_dssp BSCCCCEEEEETTTTEEEEECCCSSCCBSC----EEEEETTEEEEECCEESCTTTCEECCCEEEEETTTTEEEEECCCSS
T ss_pred CcEeeeEEEEeCCCCceEeCCCCcCCccee----EEEEECCEEEEECCCCCCCCcccccceEEEeCCCCCeEEECCCccc
Confidence 234568999999999999998777665544 37889999999976432110 00023689999999999999 5554
Q ss_pred ccccCCCCeeEEEEeCCeEEEEEecCCC-CEEEEEEECC-CCceeEEEEeccCCceeeeEEEeeCCEEEEEec------C
Q 045559 245 CLLEISPKHTVFGLYNDSLSFLVFDERE-SCFDIWTMKE-RYHWTKEFSTTPILAVDAPIGFWKNDTFFIRSN------T 316 (335)
Q Consensus 245 ~~~~~~~~~~~l~~~~g~L~~~~~~~~~-~~~~IW~l~~-~~~W~~~~~i~~~~~~~~~~~~~~~~~il~~~~------~ 316 (335)
.. ....++.++|+|++++..... ..-++|+++. ...|.....+ |.+......++ -+++|++..+ .
T Consensus 190 ~r-----~~~~~~~~~~~i~v~GG~~~~~~~~~~~~yd~~~~~W~~~~~~-p~~r~~~~~~~-~~~~i~v~GG~~~~~~~ 262 (306)
T 3ii7_A 190 AR-----KNHGLVFVKDKIFAVGGQNGLGGLDNVEYYDIKLNEWKMVSPM-PWKGVTVKCAA-VGSIVYVLAGFQGVGRL 262 (306)
T ss_dssp CC-----BSCEEEEETTEEEEECCEETTEEBCCEEEEETTTTEEEECCCC-SCCBSCCEEEE-ETTEEEEEECBCSSSBC
T ss_pred hh-----hcceEEEECCEEEEEeCCCCCCCCceEEEeeCCCCcEEECCCC-CCCccceeEEE-ECCEEEEEeCcCCCeee
Confidence 33 344577889999999765311 1234677766 6889987655 54433333333 3778877654 2
Q ss_pred CeEEEEeCCCCceeecc
Q 045559 317 EELLLYDPNSEEIIDFQ 333 (335)
Q Consensus 317 ~~l~~yd~~~~~~~~v~ 333 (335)
..+..||+++++|+++.
T Consensus 263 ~~~~~yd~~~~~W~~~~ 279 (306)
T 3ii7_A 263 GHILEYNTETDKWVANS 279 (306)
T ss_dssp CEEEEEETTTTEEEEEE
T ss_pred eeEEEEcCCCCeEEeCC
Confidence 56999999999999863
No 6
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=99.39 E-value=1.6e-11 Score=108.37 Aligned_cols=210 Identities=8% Similarity=0.031 Sum_probs=136.3
Q ss_pred cccccceEEEeec------CceEEEEecchhh---hhcCCCCcccCCcCCceeeeeEEeecCCCCCeEEEEEEEEecCcc
Q 045559 93 RGPFEGLFIMFIG------GDEIALYNHATRD---LKFLPKLTLIDNLESIYTIMFGLGLDPKCNYYKLVYIVTYHDSEL 163 (335)
Q Consensus 93 ~~s~~GLl~~~~~------~~~~~V~NP~T~~---~~~LP~~~~~~~~~~~~~~~~~l~~d~~~~~ykVv~~~~~~~~~~ 163 (335)
....+|.|.+..+ ...++++||.|++ |..+++++.. .. ....... .+ +++.+... ..
T Consensus 58 ~~~~~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W~~~~~~p~~-----r~--~~~~~~~--~~--~lyv~GG~-~~-- 123 (301)
T 2vpj_A 58 SVSLHDRIYVIGGYDGRSRLSSVECLDYTADEDGVWYSVAPMNVR-----RG--LAGATTL--GD--MIYVSGGF-DG-- 123 (301)
T ss_dssp EEEETTEEEEECCBCSSCBCCCEEEEETTCCTTCCCEEECCCSSC-----CB--SCEEEEE--TT--EEEEECCB-CS--
T ss_pred EEEECCEEEEEcCCCCCccCceEEEEECCCCCCCeeEECCCCCCC-----cc--ceeEEEE--CC--EEEEEccc-CC--
Confidence 3345565554431 3578999999999 9999877654 11 1111111 12 34444221 11
Q ss_pred ccccCCCceEEEEEcCCCcceecCcccccccccCCCceeeeecceEEEEeecCCCCCccCceEEEEEECCccceeee-cC
Q 045559 164 GKVLNDSRQVFIYSFSDNSWRNFQGFEFGMYDLDEVLDCTYHNGACHWLVPFGAFHPLCCHYVILSFDMSDEVFEEI-LG 242 (335)
Q Consensus 164 ~~~~~~~~~~~vyss~~~~W~~~~~~p~~~~~~~~~~~~v~~~G~~ywl~~~~~~~~~~~~~~i~~fD~~~e~~~~i-~~ 242 (335)
......+++|+..+++|+.++.+|.+...+ ..+.++|.+|.++...... ....+..||+.+++|+.+ ++
T Consensus 124 ---~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~----~~~~~~~~iyv~GG~~~~~---~~~~~~~~d~~~~~W~~~~~~ 193 (301)
T 2vpj_A 124 ---SRRHTSMERYDPNIDQWSMLGDMQTAREGA----GLVVASGVIYCLGGYDGLN---ILNSVEKYDPHTGHWTNVTPM 193 (301)
T ss_dssp ---SCBCCEEEEEETTTTEEEEEEECSSCCBSC----EEEEETTEEEEECCBCSSC---BCCCEEEEETTTTEEEEECCC
T ss_pred ---CcccceEEEEcCCCCeEEECCCCCCCcccc----eEEEECCEEEEECCCCCCc---ccceEEEEeCCCCcEEeCCCC
Confidence 122457999999999999987666554444 3788899999997654211 134699999999999999 55
Q ss_pred CCccccCCCCeeEEEEeCCeEEEEEecCCCC-EEEEEEECC-CCceeEEEEeccCCceeeeEEEeeCCEEEEEecC----
Q 045559 243 PNCLLEISPKHTVFGLYNDSLSFLVFDERES-CFDIWTMKE-RYHWTKEFSTTPILAVDAPIGFWKNDTFFIRSNT---- 316 (335)
Q Consensus 243 P~~~~~~~~~~~~l~~~~g~L~~~~~~~~~~-~~~IW~l~~-~~~W~~~~~i~~~~~~~~~~~~~~~~~il~~~~~---- 316 (335)
|... ....++..+|+|++++...... .-++|+++. ...|.....+ |.+......++ -+++|++..+.
T Consensus 194 p~~r-----~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~-p~~r~~~~~~~-~~~~i~v~GG~~~~~ 266 (301)
T 2vpj_A 194 ATKR-----SGAGVALLNDHIYVVGGFDGTAHLSSVEAYNIRTDSWTTVTSM-TTPRCYVGATV-LRGRLYAIAGYDGNS 266 (301)
T ss_dssp SSCC-----BSCEEEEETTEEEEECCBCSSSBCCCEEEEETTTTEEEEECCC-SSCCBSCEEEE-ETTEEEEECCBCSSS
T ss_pred Cccc-----ccceEEEECCEEEEEeCCCCCcccceEEEEeCCCCcEEECCCC-CCcccceeEEE-ECCEEEEEcCcCCCc
Confidence 5433 3345778899999998764211 334666665 6899987656 54433333333 37888777541
Q ss_pred --CeEEEEeCCCCceeecc
Q 045559 317 --EELLLYDPNSEEIIDFQ 333 (335)
Q Consensus 317 --~~l~~yd~~~~~~~~v~ 333 (335)
..+..||+++++|+++.
T Consensus 267 ~~~~v~~yd~~~~~W~~~~ 285 (301)
T 2vpj_A 267 LLSSIECYDPIIDSWEVVT 285 (301)
T ss_dssp BEEEEEEEETTTTEEEEEE
T ss_pred ccccEEEEcCCCCeEEEcC
Confidence 46899999999999763
No 7
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=99.32 E-value=1.9e-10 Score=102.17 Aligned_cols=207 Identities=10% Similarity=0.027 Sum_probs=128.8
Q ss_pred CceEEEEecchhhhhcCCCCcccCCcCCceeeeeEEeecCCCCCeEEEEEEEEecCccccccCCCceEEEEEcCCCccee
Q 045559 106 GDEIALYNHATRDLKFLPKLTLIDNLESIYTIMFGLGLDPKCNYYKLVYIVTYHDSELGKVLNDSRQVFIYSFSDNSWRN 185 (335)
Q Consensus 106 ~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~l~~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~~~vyss~~~~W~~ 185 (335)
...+.++||.|++|.. ++.+.+ .+ +...... ...+...|+......... ........+++|+..+++|+.
T Consensus 12 G~~~~~yd~~~~~W~~-~~~~~p-~~----r~~~~~~--~~~~~iyv~GG~~~~~~~--~~~~~~~~~~~~d~~~~~W~~ 81 (315)
T 4asc_A 12 EEGAVAYDPAANECYC-ASLSSQ-VP----KNHVSLV--TKENQVFVAGGLFYNEDN--KEDPMSAYFLQFDHLDSEWLG 81 (315)
T ss_dssp TTEEEEEETTTTEEEE-EECCCC-SC----SSEEEEE--CTTCCEEEEEEEEECSSC--SSSCEEEEEEEEETTTTEEEE
T ss_pred CCceEEECCCCCeEec-CCCCCC-CC----ccceEEE--EECCEEEEEcCcccCCCC--CccccccceEEecCCCCeEEE
Confidence 4789999999999986 333322 01 1112222 123344444432210010 001112348999999999999
Q ss_pred cCcccccccccCCCceeeeecceEEEEeecCCCCCccCceEEEEEECCccceeee-cCCCccccCCCCeeEEEEeCCeEE
Q 045559 186 FQGFEFGMYDLDEVLDCTYHNGACHWLVPFGAFHPLCCHYVILSFDMSDEVFEEI-LGPNCLLEISPKHTVFGLYNDSLS 264 (335)
Q Consensus 186 ~~~~p~~~~~~~~~~~~v~~~G~~ywl~~~~~~~~~~~~~~i~~fD~~~e~~~~i-~~P~~~~~~~~~~~~l~~~~g~L~ 264 (335)
++.+|.+...+ ..+.++|.+|.+..............+..||+.+.+|+.+ ++|... .....+..+|+|+
T Consensus 82 ~~~~p~~r~~~----~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r-----~~~~~~~~~~~iy 152 (315)
T 4asc_A 82 MPPLPSPRCLF----GLGEALNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYVV-----YGHTVLSHMDLVY 152 (315)
T ss_dssp CCCBSSCEESC----EEEEETTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSSCC-----BSCEEEEETTEEE
T ss_pred CCCCCcchhce----eEEEECCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCCcc-----cceeEEEECCEEE
Confidence 88777665544 3788899999998642100000134689999999999998 666543 3345677999999
Q ss_pred EEEecC--CCCEEEEEEECC-CCceeEEEEeccCCceeeeEEEeeCCEEEEEec------CCeEEEEeCCCCceeecc
Q 045559 265 FLVFDE--RESCFDIWTMKE-RYHWTKEFSTTPILAVDAPIGFWKNDTFFIRSN------TEELLLYDPNSEEIIDFQ 333 (335)
Q Consensus 265 ~~~~~~--~~~~~~IW~l~~-~~~W~~~~~i~~~~~~~~~~~~~~~~~il~~~~------~~~l~~yd~~~~~~~~v~ 333 (335)
+++... ....-++|+++. +..|++...+ |.+......+ .-+++|++..+ ...+..||+++++|+++.
T Consensus 153 v~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~-p~~r~~~~~~-~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~ 228 (315)
T 4asc_A 153 VIGGKGSDRKCLNKMCVYDPKKFEWKELAPM-QTARSLFGAT-VHDGRIIVAAGVTDTGLTSSAEVYSITDNKWAPFE 228 (315)
T ss_dssp EECCBCTTSCBCCCEEEEETTTTEEEECCCC-SSCCBSCEEE-EETTEEEEEEEECSSSEEEEEEEEETTTTEEEEEC
T ss_pred EEeCCCCCCcccceEEEEeCCCCeEEECCCC-CCchhceEEE-EECCEEEEEeccCCCCccceEEEEECCCCeEEECC
Confidence 998862 222345677776 6899987655 4443322233 33778877653 136899999999999874
No 8
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=99.32 E-value=3.5e-11 Score=106.40 Aligned_cols=197 Identities=11% Similarity=-0.041 Sum_probs=130.3
Q ss_pred CceEEEEecchhhhhcCCCCcccCCcCCceeeeeEEeecCCCCCeEEEEEEEEecCccccccCCCceEEEEEcCCCccee
Q 045559 106 GDEIALYNHATRDLKFLPKLTLIDNLESIYTIMFGLGLDPKCNYYKLVYIVTYHDSELGKVLNDSRQVFIYSFSDNSWRN 185 (335)
Q Consensus 106 ~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~l~~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~~~vyss~~~~W~~ 185 (335)
...+.++||.|++|..++.++.. +... ... ..+ + +++.+... . ......+++|+..+++|+.
T Consensus 23 ~~~~~~~d~~~~~W~~~~~~p~~----r~~~-~~~-~~~---~--~lyv~GG~--~-----~~~~~~~~~~d~~~~~W~~ 84 (306)
T 3ii7_A 23 PQSCRYFNPKDYSWTDIRCPFEK----RRDA-ACV-FWD---N--VVYILGGS--Q-----LFPIKRMDCYNVVKDSWYS 84 (306)
T ss_dssp TTSEEEEETTTTEEEECCCCSCC----CBSC-EEE-EET---T--EEEEECCB--S-----SSBCCEEEEEETTTTEEEE
T ss_pred CceEEEecCCCCCEecCCCCCcc----ccee-EEE-EEC---C--EEEEEeCC--C-----CCCcceEEEEeCCCCeEEE
Confidence 56789999999999999877654 1111 111 111 2 23333211 0 1234679999999999999
Q ss_pred cCcccccccccCCCceeeeecceEEEEeecCCCCCccCceEEEEEECCccceeee-cCCCccccCCCCeeEEEEeCCeEE
Q 045559 186 FQGFEFGMYDLDEVLDCTYHNGACHWLVPFGAFHPLCCHYVILSFDMSDEVFEEI-LGPNCLLEISPKHTVFGLYNDSLS 264 (335)
Q Consensus 186 ~~~~p~~~~~~~~~~~~v~~~G~~ywl~~~~~~~~~~~~~~i~~fD~~~e~~~~i-~~P~~~~~~~~~~~~l~~~~g~L~ 264 (335)
++.+|.+...+ ..+.++|.+|.+....... .....+..||+.+++|+.+ ++|... .....+..+|+|+
T Consensus 85 ~~~~p~~r~~~----~~~~~~~~iyv~GG~~~~~--~~~~~~~~~d~~~~~W~~~~~~p~~r-----~~~~~~~~~~~iy 153 (306)
T 3ii7_A 85 KLGPPTPRDSL----AACAAEGKIYTSGGSEVGN--SALYLFECYDTRTESWHTKPSMLTQR-----CSHGMVEANGLIY 153 (306)
T ss_dssp EECCSSCCBSC----EEEEETTEEEEECCBBTTB--SCCCCEEEEETTTTEEEEECCCSSCC-----BSCEEEEETTEEE
T ss_pred CCCCCccccce----eEEEECCEEEEECCCCCCC--cEeeeEEEEeCCCCceEeCCCCcCCc-----ceeEEEEECCEEE
Confidence 87766655544 3788899999998653110 0134699999999999999 555543 2345677899999
Q ss_pred EEEecCCC-C----EEEEEEECC-CCceeEEEEeccCCceeeeEEEeeCCEEEEEec------CCeEEEEeCCCCceeec
Q 045559 265 FLVFDERE-S----CFDIWTMKE-RYHWTKEFSTTPILAVDAPIGFWKNDTFFIRSN------TEELLLYDPNSEEIIDF 332 (335)
Q Consensus 265 ~~~~~~~~-~----~~~IW~l~~-~~~W~~~~~i~~~~~~~~~~~~~~~~~il~~~~------~~~l~~yd~~~~~~~~v 332 (335)
+++..... . .-++|+++. ...|.+...+ |.+....-.. .-+++|++..+ ...+..||+++++|+++
T Consensus 154 v~GG~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~-p~~r~~~~~~-~~~~~i~v~GG~~~~~~~~~~~~yd~~~~~W~~~ 231 (306)
T 3ii7_A 154 VCGGSLGNNVSGRVLNSCEVYDPATETWTELCPM-IEARKNHGLV-FVKDKIFAVGGQNGLGGLDNVEYYDIKLNEWKMV 231 (306)
T ss_dssp EECCEESCTTTCEECCCEEEEETTTTEEEEECCC-SSCCBSCEEE-EETTEEEEECCEETTEEBCCEEEEETTTTEEEEC
T ss_pred EECCCCCCCCcccccceEEEeCCCCCeEEECCCc-cchhhcceEE-EECCEEEEEeCCCCCCCCceEEEeeCCCCcEEEC
Confidence 99875311 1 344666665 6899987655 4443323233 23778877753 24699999999999987
Q ss_pred c
Q 045559 333 Q 333 (335)
Q Consensus 333 ~ 333 (335)
.
T Consensus 232 ~ 232 (306)
T 3ii7_A 232 S 232 (306)
T ss_dssp C
T ss_pred C
Confidence 4
No 9
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=99.32 E-value=7.5e-11 Score=103.99 Aligned_cols=197 Identities=13% Similarity=0.138 Sum_probs=130.5
Q ss_pred CceEEEEecchhhhhcCCCCcccCCcCCceeeeeEEeecCCCCCeEEEEEEEEecCccccccCCCceEEEEEcCCCc---
Q 045559 106 GDEIALYNHATRDLKFLPKLTLIDNLESIYTIMFGLGLDPKCNYYKLVYIVTYHDSELGKVLNDSRQVFIYSFSDNS--- 182 (335)
Q Consensus 106 ~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~l~~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~~~vyss~~~~--- 182 (335)
...++++||.|++|..+|.++.. +... .....+ + +++.+... .. ......+++|+..++.
T Consensus 30 ~~~~~~~d~~~~~W~~~~~~p~~----r~~~--~~~~~~---~--~l~v~GG~-~~-----~~~~~~~~~~d~~~~~~~~ 92 (301)
T 2vpj_A 30 IDVVEKYDPKTQEWSFLPSITRK----RRYV--ASVSLH---D--RIYVIGGY-DG-----RSRLSSVECLDYTADEDGV 92 (301)
T ss_dssp CCCEEEEETTTTEEEECCCCSSC----CBSC--EEEEET---T--EEEEECCB-CS-----SCBCCCEEEEETTCCTTCC
T ss_pred eeEEEEEcCCCCeEEeCCCCChh----hccc--cEEEEC---C--EEEEEcCC-CC-----CccCceEEEEECCCCCCCe
Confidence 45789999999999999976654 0111 111111 2 33333221 11 1234578999999999
Q ss_pred ceecCcccccccccCCCceeeeecceEEEEeecCCCCCccCceEEEEEECCccceeee-cCCCccccCCCCeeEEEEeCC
Q 045559 183 WRNFQGFEFGMYDLDEVLDCTYHNGACHWLVPFGAFHPLCCHYVILSFDMSDEVFEEI-LGPNCLLEISPKHTVFGLYND 261 (335)
Q Consensus 183 W~~~~~~p~~~~~~~~~~~~v~~~G~~ywl~~~~~~~~~~~~~~i~~fD~~~e~~~~i-~~P~~~~~~~~~~~~l~~~~g 261 (335)
|+.++.+|.+...+ ..+.++|.+|.+....... ....+..||+.+++|+.+ ++|... .....+..+|
T Consensus 93 W~~~~~~p~~r~~~----~~~~~~~~lyv~GG~~~~~---~~~~~~~~d~~~~~W~~~~~~p~~r-----~~~~~~~~~~ 160 (301)
T 2vpj_A 93 WYSVAPMNVRRGLA----GATTLGDMIYVSGGFDGSR---RHTSMERYDPNIDQWSMLGDMQTAR-----EGAGLVVASG 160 (301)
T ss_dssp CEEECCCSSCCBSC----EEEEETTEEEEECCBCSSC---BCCEEEEEETTTTEEEEEEECSSCC-----BSCEEEEETT
T ss_pred eEECCCCCCCccce----eEEEECCEEEEEcccCCCc---ccceEEEEcCCCCeEEECCCCCCCc-----ccceEEEECC
Confidence 99998766655444 3788899999998654321 134799999999999998 555433 3345677899
Q ss_pred eEEEEEecCC-CCEEEEEEECC-CCceeEEEEeccCCceeeeEEEeeCCEEEEEec------CCeEEEEeCCCCceeecc
Q 045559 262 SLSFLVFDER-ESCFDIWTMKE-RYHWTKEFSTTPILAVDAPIGFWKNDTFFIRSN------TEELLLYDPNSEEIIDFQ 333 (335)
Q Consensus 262 ~L~~~~~~~~-~~~~~IW~l~~-~~~W~~~~~i~~~~~~~~~~~~~~~~~il~~~~------~~~l~~yd~~~~~~~~v~ 333 (335)
+|++++.... ...-++|+++. ...|++...+ |.+....... .-+++|++..+ ...+..||+++++|+++.
T Consensus 161 ~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~-p~~r~~~~~~-~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~ 238 (301)
T 2vpj_A 161 VIYCLGGYDGLNILNSVEKYDPHTGHWTNVTPM-ATKRSGAGVA-LLNDHIYVVGGFDGTAHLSSVEAYNIRTDSWTTVT 238 (301)
T ss_dssp EEEEECCBCSSCBCCCEEEEETTTTEEEEECCC-SSCCBSCEEE-EETTEEEEECCBCSSSBCCCEEEEETTTTEEEEEC
T ss_pred EEEEECCCCCCcccceEEEEeCCCCcEEeCCCC-CcccccceEE-EECCEEEEEeCCCCCcccceEEEEeCCCCcEEECC
Confidence 9999987641 12334666666 6899987555 4443322223 33778877754 246999999999999874
No 10
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=99.32 E-value=3.6e-11 Score=106.55 Aligned_cols=201 Identities=10% Similarity=-0.015 Sum_probs=129.3
Q ss_pred CceEEEEecchhhhhcCCCCcccCCcCCceeeeeEEeecCCCCCeEEEEEEEEecCccccccCCCceEEEEEcCCCccee
Q 045559 106 GDEIALYNHATRDLKFLPKLTLIDNLESIYTIMFGLGLDPKCNYYKLVYIVTYHDSELGKVLNDSRQVFIYSFSDNSWRN 185 (335)
Q Consensus 106 ~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~l~~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~~~vyss~~~~W~~ 185 (335)
...+.++||.|++|..++.++..+ .. ...... .+...|+......... ......+++|+..+++|+.
T Consensus 38 ~~~~~~~d~~~~~W~~~~~~p~~r----~~---~~~~~~--~~~lyv~GG~~~~~~~----~~~~~~~~~~d~~~~~W~~ 104 (308)
T 1zgk_A 38 LSYLEAYNPSNGTWLRLADLQVPR----SG---LAGCVV--GGLLYAVGGRNNSPDG----NTDSSALDCYNPMTNQWSP 104 (308)
T ss_dssp CCCEEEEETTTTEEEECCCCSSCC----BS---CEEEEE--TTEEEEECCEEEETTE----EEECCCEEEEETTTTEEEE
T ss_pred cceEEEEcCCCCeEeECCCCCccc----cc---ceEEEE--CCEEEEECCCcCCCCC----CeecceEEEECCCCCeEeE
Confidence 457899999999999998776541 11 111111 1222222221100000 1223578999999999999
Q ss_pred cCcccccccccCCCceeeeecceEEEEeecCCCCCccCceEEEEEECCccceeee-cCCCccccCCCCeeEEEEeCCeEE
Q 045559 186 FQGFEFGMYDLDEVLDCTYHNGACHWLVPFGAFHPLCCHYVILSFDMSDEVFEEI-LGPNCLLEISPKHTVFGLYNDSLS 264 (335)
Q Consensus 186 ~~~~p~~~~~~~~~~~~v~~~G~~ywl~~~~~~~~~~~~~~i~~fD~~~e~~~~i-~~P~~~~~~~~~~~~l~~~~g~L~ 264 (335)
++.+|.+...+ ..+.++|.+|.+....... ....+..||+.+++|+.+ ++|... .....+..+|+|+
T Consensus 105 ~~~~p~~r~~~----~~~~~~~~iyv~GG~~~~~---~~~~~~~yd~~~~~W~~~~~~p~~r-----~~~~~~~~~~~iy 172 (308)
T 1zgk_A 105 CAPMSVPRNRI----GVGVIDGHIYAVGGSHGCI---HHNSVERYEPERDEWHLVAPMLTRR-----IGVGVAVLNRLLY 172 (308)
T ss_dssp CCCCSSCCBTC----EEEEETTEEEEECCEETTE---ECCCEEEEETTTTEEEECCCCSSCC-----BSCEEEEETTEEE
T ss_pred CCCCCcCcccc----EEEEECCEEEEEcCCCCCc---ccccEEEECCCCCeEeECCCCCccc-----cceEEEEECCEEE
Confidence 98766654444 3788899999997643210 023689999999999999 556543 2335677799999
Q ss_pred EEEecCCC-CEEEEEEECC-CCceeEEEEeccCCceeeeEEEeeCCEEEEEec------CCeEEEEeCCCCceeecc
Q 045559 265 FLVFDERE-SCFDIWTMKE-RYHWTKEFSTTPILAVDAPIGFWKNDTFFIRSN------TEELLLYDPNSEEIIDFQ 333 (335)
Q Consensus 265 ~~~~~~~~-~~~~IW~l~~-~~~W~~~~~i~~~~~~~~~~~~~~~~~il~~~~------~~~l~~yd~~~~~~~~v~ 333 (335)
+++..... ..-++|+++. ...|...-.+ |.+....-..+ -+++|++..+ ...+..||+++++|+++.
T Consensus 173 v~GG~~~~~~~~~~~~yd~~~~~W~~~~~~-p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~ 247 (308)
T 1zgk_A 173 AVGGFDGTNRLNSAECYYPERNEWRMITAM-NTIRSGAGVCV-LHNCIYAAGGYDGQDQLNSVERYDVETETWTFVA 247 (308)
T ss_dssp EECCBCSSCBCCCEEEEETTTTEEEECCCC-SSCCBSCEEEE-ETTEEEEECCBCSSSBCCCEEEEETTTTEEEECC
T ss_pred EEeCCCCCCcCceEEEEeCCCCeEeeCCCC-CCccccceEEE-ECCEEEEEeCCCCCCccceEEEEeCCCCcEEECC
Confidence 99876411 1334566665 6899987655 44433332332 3788887764 256999999999999874
No 11
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=99.31 E-value=5.6e-11 Score=104.88 Aligned_cols=197 Identities=11% Similarity=0.083 Sum_probs=129.7
Q ss_pred CceEEEEecchhhhhcCCCCcccCCcCCceeeeeEEeecCCCCCeEEEEEEEEecCccccccCCCceEEEEEcCCCccee
Q 045559 106 GDEIALYNHATRDLKFLPKLTLIDNLESIYTIMFGLGLDPKCNYYKLVYIVTYHDSELGKVLNDSRQVFIYSFSDNSWRN 185 (335)
Q Consensus 106 ~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~l~~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~~~vyss~~~~W~~ 185 (335)
...+.++||.|++|..++.++.. +.. .+.... +. +++.+... .. ......+++|+..+++|+.
T Consensus 29 ~~~~~~~d~~~~~W~~~~~~p~~----r~~---~~~~~~---~~-~lyv~GG~-~~-----~~~~~~~~~~d~~~~~W~~ 91 (302)
T 2xn4_A 29 IRSVECYDFKEERWHQVAELPSR----RCR---AGMVYM---AG-LVFAVGGF-NG-----SLRVRTVDSYDPVKDQWTS 91 (302)
T ss_dssp CCCEEEEETTTTEEEEECCCSSC----CBS---CEEEEE---TT-EEEEESCB-CS-----SSBCCCEEEEETTTTEEEE
T ss_pred CCcEEEEcCcCCcEeEcccCCcc----ccc---ceEEEE---CC-EEEEEeCc-CC-----CccccceEEECCCCCceee
Confidence 35688999999999999876654 111 111111 11 23333211 01 1223578999999999999
Q ss_pred cCcccccccccCCCceeeeecceEEEEeecCCCCCccCceEEEEEECCccceeee-cCCCccccCCCCeeEEEEeCCeEE
Q 045559 186 FQGFEFGMYDLDEVLDCTYHNGACHWLVPFGAFHPLCCHYVILSFDMSDEVFEEI-LGPNCLLEISPKHTVFGLYNDSLS 264 (335)
Q Consensus 186 ~~~~p~~~~~~~~~~~~v~~~G~~ywl~~~~~~~~~~~~~~i~~fD~~~e~~~~i-~~P~~~~~~~~~~~~l~~~~g~L~ 264 (335)
++.+|.+...+ ..+.++|.+|.+....... ....+..||+.+++|+.+ ++|... .....+..+|+|+
T Consensus 92 ~~~~p~~r~~~----~~~~~~~~iyv~GG~~~~~---~~~~~~~~d~~~~~W~~~~~~p~~r-----~~~~~~~~~~~iy 159 (302)
T 2xn4_A 92 VANMRDRRSTL----GAAVLNGLLYAVGGFDGST---GLSSVEAYNIKSNEWFHVAPMNTRR-----SSVGVGVVGGLLY 159 (302)
T ss_dssp ECCCSSCCBSC----EEEEETTEEEEEEEECSSC---EEEEEEEEETTTTEEEEECCCSSCC-----BSCEEEEETTEEE
T ss_pred CCCCCccccce----EEEEECCEEEEEcCCCCCc---cCceEEEEeCCCCeEeecCCCCCcc-----cCceEEEECCEEE
Confidence 98776654444 3788899999998754321 134789999999999999 555432 3345677899999
Q ss_pred EEEecCCCC---EEEEEEECC-CCceeEEEEeccCCceeeeEEEeeCCEEEEEec------CCeEEEEeCCCCceeecc
Q 045559 265 FLVFDERES---CFDIWTMKE-RYHWTKEFSTTPILAVDAPIGFWKNDTFFIRSN------TEELLLYDPNSEEIIDFQ 333 (335)
Q Consensus 265 ~~~~~~~~~---~~~IW~l~~-~~~W~~~~~i~~~~~~~~~~~~~~~~~il~~~~------~~~l~~yd~~~~~~~~v~ 333 (335)
+++...... .-++|+++. ...|.+.-.+ |.+....... .-+++|++..+ ...+..||+++++|+++.
T Consensus 160 v~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~-p~~r~~~~~~-~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~ 236 (302)
T 2xn4_A 160 AVGGYDVASRQCLSTVECYNATTNEWTYIAEM-STRRSGAGVG-VLNNLLYAVGGHDGPLVRKSVEVYDPTTNAWRQVA 236 (302)
T ss_dssp EECCEETTTTEECCCEEEEETTTTEEEEECCC-SSCCBSCEEE-EETTEEEEECCBSSSSBCCCEEEEETTTTEEEEEC
T ss_pred EEeCCCCCCCccccEEEEEeCCCCcEEECCCC-ccccccccEE-EECCEEEEECCCCCCcccceEEEEeCCCCCEeeCC
Confidence 998753111 234666666 6899987655 5443333233 33788887754 246999999999999874
No 12
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=99.24 E-value=4.6e-10 Score=99.80 Aligned_cols=214 Identities=8% Similarity=-0.007 Sum_probs=128.7
Q ss_pred cceEEEeecCceEEEEecchhhhhcCCCCcccCCcCCceeeeeEEeecCCCCCeEEEEEEEEecCccccccCCCceEEEE
Q 045559 97 EGLFIMFIGGDEIALYNHATRDLKFLPKLTLIDNLESIYTIMFGLGLDPKCNYYKLVYIVTYHDSELGKVLNDSRQVFIY 176 (335)
Q Consensus 97 ~GLl~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~l~~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~~~vy 176 (335)
++.|.+.. .....++||.|++|...|.+ .. .+ +. ..... ...+.-.|+.... .... .........+++|
T Consensus 15 ~~~i~~~G-G~~~~~yd~~~~~W~~~~~~-~~-~~-r~---~~~~~--~~~~~lyv~GG~~-~~~~-~~~~~~~~~~~~~ 83 (318)
T 2woz_A 15 KDLILLVN-DTAAVAYDPMENECYLTALA-EQ-IP-RN---HSSIV--TQQNQVYVVGGLY-VDEE-NKDQPLQSYFFQL 83 (318)
T ss_dssp EEEEEEEC-SSEEEEEETTTTEEEEEEEC-TT-SC-SS---EEEEE--CSSSCEEEEESSC-C--------CCCBEEEEE
T ss_pred cchhhhcc-ccceEEECCCCCceecccCC-cc-CC-cc---ceEEE--EECCEEEEECCcc-cCcc-ccCCCccccEEEE
Confidence 34544444 45689999999999884322 11 01 01 11111 1122222222210 0000 0001122348999
Q ss_pred EcCCCcceecCcccccccccCCCceeeeecceEEEEeecCCCCCccCceEEEEEECCccceeee-cCCCccccCCCCeeE
Q 045559 177 SFSDNSWRNFQGFEFGMYDLDEVLDCTYHNGACHWLVPFGAFHPLCCHYVILSFDMSDEVFEEI-LGPNCLLEISPKHTV 255 (335)
Q Consensus 177 ss~~~~W~~~~~~p~~~~~~~~~~~~v~~~G~~ywl~~~~~~~~~~~~~~i~~fD~~~e~~~~i-~~P~~~~~~~~~~~~ 255 (335)
+..+++|+.++.+|.+...+ ..+.++|.+|.+....... ......+..||+.+.+|+.+ ++|... ....
T Consensus 84 d~~~~~W~~~~~~p~~r~~~----~~~~~~~~iyv~GG~~~~~-~~~~~~~~~yd~~~~~W~~~~~~p~~r-----~~~~ 153 (318)
T 2woz_A 84 DNVSSEWVGLPPLPSARCLF----GLGEVDDKIYVVAGKDLQT-EASLDSVLCYDPVAAKWSEVKNLPIKV-----YGHN 153 (318)
T ss_dssp ETTTTEEEECSCBSSCBCSC----EEEEETTEEEEEEEEBTTT-CCEEEEEEEEETTTTEEEEECCCSSCE-----ESCE
T ss_pred eCCCCcEEECCCCCcccccc----ceEEECCEEEEEcCccCCC-CcccceEEEEeCCCCCEeECCCCCCcc-----cccE
Confidence 99999999998776664444 3788899999998753100 00135799999999999999 666543 2334
Q ss_pred EEEeCCeEEEEEecC--CCCEEEEEEECC-CCceeEEEEeccCCceeeeEEEeeCCEEEEEec------CCeEEEEeCCC
Q 045559 256 FGLYNDSLSFLVFDE--RESCFDIWTMKE-RYHWTKEFSTTPILAVDAPIGFWKNDTFFIRSN------TEELLLYDPNS 326 (335)
Q Consensus 256 l~~~~g~L~~~~~~~--~~~~~~IW~l~~-~~~W~~~~~i~~~~~~~~~~~~~~~~~il~~~~------~~~l~~yd~~~ 326 (335)
.+..+|+|++++... ....-++|+++. ...|.+.-.+ |.+......+ .-+++|++..+ ...+..||+++
T Consensus 154 ~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~-p~~r~~~~~~-~~~~~iyv~GG~~~~~~~~~~~~yd~~~ 231 (318)
T 2woz_A 154 VISHNGMIYCLGGKTDDKKCTNRVFIYNPKKGDWKDLAPM-KTPRSMFGVA-IHKGKIVIAGGVTEDGLSASVEAFDLKT 231 (318)
T ss_dssp EEEETTEEEEECCEESSSCBCCCEEEEETTTTEEEEECCC-SSCCBSCEEE-EETTEEEEEEEEETTEEEEEEEEEETTT
T ss_pred EEEECCEEEEEcCCCCCCCccceEEEEcCCCCEEEECCCC-CCCcccceEE-EECCEEEEEcCcCCCCccceEEEEECCC
Confidence 666899999998752 112334677776 6899987655 4443322233 23778877653 13588999999
Q ss_pred Cceeecc
Q 045559 327 EEIIDFQ 333 (335)
Q Consensus 327 ~~~~~v~ 333 (335)
++|+++.
T Consensus 232 ~~W~~~~ 238 (318)
T 2woz_A 232 NKWEVMT 238 (318)
T ss_dssp CCEEECC
T ss_pred CeEEECC
Confidence 9999874
No 13
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=99.18 E-value=5.5e-10 Score=100.90 Aligned_cols=218 Identities=11% Similarity=0.019 Sum_probs=127.8
Q ss_pred cccceEEEee--cCceEEEEecch--hhhhcCCCCc-ccCCcCCceeeeeEEeecCCCCCeEEEEEEEEecCccccccCC
Q 045559 95 PFEGLFIMFI--GGDEIALYNHAT--RDLKFLPKLT-LIDNLESIYTIMFGLGLDPKCNYYKLVYIVTYHDSELGKVLND 169 (335)
Q Consensus 95 s~~GLl~~~~--~~~~~~V~NP~T--~~~~~LP~~~-~~~~~~~~~~~~~~l~~d~~~~~ykVv~~~~~~~~~~~~~~~~ 169 (335)
..+|-|.+.. ....++++||.+ ++|..+|+++ .. +...... .++ +...|+........ .....
T Consensus 17 ~~~~~iyv~GG~~~~~~~~~d~~~~~~~W~~~~~~p~~~----R~~~~~~--~~~---~~lyv~GG~~~~~~---~~~~~ 84 (357)
T 2uvk_A 17 IDNDTVYIGLGSAGTAWYKLDTQAKDKKWTALAAFPGGP----RDQATSA--FID---GNLYVFGGIGKNSE---GLTQV 84 (357)
T ss_dssp EETTEEEEECGGGTTCEEEEETTSSSCCEEECCCCTTCC----CBSCEEE--EET---TEEEEECCEEECTT---SCEEE
T ss_pred EECCEEEEEeCcCCCeEEEEccccCCCCeeECCCCCCCc----CccceEE--EEC---CEEEEEcCCCCCCC---cccee
Confidence 3366665543 356899999984 9999999876 33 1111111 122 22222222211000 00122
Q ss_pred CceEEEEEcCCCcceecCccc-ccccccCCCceeeeecceEEEEeecCCCC-----------------------------
Q 045559 170 SRQVFIYSFSDNSWRNFQGFE-FGMYDLDEVLDCTYHNGACHWLVPFGAFH----------------------------- 219 (335)
Q Consensus 170 ~~~~~vyss~~~~W~~~~~~p-~~~~~~~~~~~~v~~~G~~ywl~~~~~~~----------------------------- 219 (335)
...+++|+..+++|+.++.++ .+...+ ..+.++|.+|.+.......
T Consensus 85 ~~~v~~yd~~~~~W~~~~~~~p~~r~~~----~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (357)
T 2uvk_A 85 FNDVHKYNPKTNSWVKLMSHAPMGMAGH----VTFVHNGKAYVTGGVNQNIFNGYFEDLNEAGKDSTAIDKINAHYFDKK 160 (357)
T ss_dssp CCCEEEEETTTTEEEECSCCCSSCCSSE----EEEEETTEEEEEECCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHSSC
T ss_pred eccEEEEeCCCCcEEECCCCCCcccccc----eEEEECCEEEEEeCcCCCcCcccccchhhcCCcccchhhhhhhhcccc
Confidence 457899999999999988665 333333 3677999999998653210
Q ss_pred --CccCceEEEEEECCccceeee-cCCCccccCCCCeeEEEEeCCeEEEEEecCC--CCEEEEEEEC--C-CCceeEEEE
Q 045559 220 --PLCCHYVILSFDMSDEVFEEI-LGPNCLLEISPKHTVFGLYNDSLSFLVFDER--ESCFDIWTMK--E-RYHWTKEFS 291 (335)
Q Consensus 220 --~~~~~~~i~~fD~~~e~~~~i-~~P~~~~~~~~~~~~l~~~~g~L~~~~~~~~--~~~~~IW~l~--~-~~~W~~~~~ 291 (335)
.......+..||+.+++|+.+ ++|.... ....++..+++|++++.... ...-++|.++ . ...|.++..
T Consensus 161 ~~~~~~~~~v~~yd~~~~~W~~~~~~p~~~~----~~~~~~~~~~~iyv~GG~~~~~~~~~~v~~~d~d~~~~~W~~~~~ 236 (357)
T 2uvk_A 161 AEDYFFNKFLLSFDPSTQQWSYAGESPWYGT----AGAAVVNKGDKTWLINGEAKPGLRTDAVFELDFTGNNLKWNKLAP 236 (357)
T ss_dssp GGGGCCCCEEEEEETTTTEEEEEEECSSCCC----BSCEEEEETTEEEEECCEEETTEECCCEEEEECC---CEEEECCC
T ss_pred ccccCCcccEEEEeCCCCcEEECCCCCCCCc----ccccEEEECCEEEEEeeecCCCcccCceEEEEecCCCCcEEecCC
Confidence 000024799999999999999 6664321 22467888999999976421 1133455553 2 688998765
Q ss_pred eccCCc-eeeeEEEeeCCEEEEEecC-----------------------CeEEEEeCCCCceeecc
Q 045559 292 TTPILA-VDAPIGFWKNDTFFIRSNT-----------------------EELLLYDPNSEEIIDFQ 333 (335)
Q Consensus 292 i~~~~~-~~~~~~~~~~~~il~~~~~-----------------------~~l~~yd~~~~~~~~v~ 333 (335)
+ |.+. .....++..+++|++..+. ..+..||+++++|+++.
T Consensus 237 ~-~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~~~~~W~~~~ 301 (357)
T 2uvk_A 237 V-SSPDGVAGGFAGISNDSLIFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWHNGKWDKSG 301 (357)
T ss_dssp S-STTTCCBSCEEEEETTEEEEECCEECTTHHHHHHTTCSSTTTTCCCEECCEEEECC---CEEEE
T ss_pred C-CCCcccccceEEEECCEEEEEcCccccCCcccccccceeccccccceeeEEEEecCCCceeeCC
Confidence 5 4332 2222233447888776541 25789999999999863
No 14
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=98.99 E-value=9.3e-09 Score=101.20 Aligned_cols=213 Identities=12% Similarity=0.118 Sum_probs=127.9
Q ss_pred ccceEEEeec-----CceEEEEecchhhhhcCC-CCcccCCcCCceeeeeEEeecCCCCCeEEEEEEEEecCccccccCC
Q 045559 96 FEGLFIMFIG-----GDEIALYNHATRDLKFLP-KLTLIDNLESIYTIMFGLGLDPKCNYYKLVYIVTYHDSELGKVLND 169 (335)
Q Consensus 96 ~~GLl~~~~~-----~~~~~V~NP~T~~~~~LP-~~~~~~~~~~~~~~~~~l~~d~~~~~ykVv~~~~~~~~~~~~~~~~ 169 (335)
.+|-|.+..+ ...++++||.|++|..++ +.+....+. .+...........+ +++.+...... ...
T Consensus 396 ~~~~iyv~GG~~~~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~--~R~~hs~~~~~~~~--~lyv~GG~~~~-----~~~ 466 (695)
T 2zwa_A 396 AGNDVFYMGGSNPYRVNEILQLSIHYDKIDMKNIEVSSSEVPV--ARMCHTFTTISRNN--QLLLIGGRKAP-----HQG 466 (695)
T ss_dssp CSSCEEEECCBSSSBCCCEEEEEECSSCEEEEECCCCCSCCCC--CCBSCEEEEETTTT--EEEEECCBSST-----TCB
T ss_pred ECCEEEEECCCCCCCcCcEEEEECCCCeEEEeccCCCCCCCCc--cccceEEEEEccCC--EEEEEcCCCCC-----CCc
Confidence 3555544432 356899999999999998 522110010 01111222111012 23333221010 112
Q ss_pred CceEEEEEcCCCcceecCcccccccccCCCceeeee-cceEEEEeecCCCCCccCceEEEEEECCccceeeec----CCC
Q 045559 170 SRQVFIYSFSDNSWRNFQGFEFGMYDLDEVLDCTYH-NGACHWLVPFGAFHPLCCHYVILSFDMSDEVFEEIL----GPN 244 (335)
Q Consensus 170 ~~~~~vyss~~~~W~~~~~~p~~~~~~~~~~~~v~~-~G~~ywl~~~~~~~~~~~~~~i~~fD~~~e~~~~i~----~P~ 244 (335)
...+++|+..++.|+.++.+|.+...+. ++.+ +|.+|.++..... . .+..||+.+++|+.++ +|.
T Consensus 467 ~~dv~~yd~~t~~W~~~~~~p~~R~~h~----~~~~~~~~iyv~GG~~~~-----~-~v~~yd~~t~~W~~~~~~g~~p~ 536 (695)
T 2zwa_A 467 LSDNWIFDMKTREWSMIKSLSHTRFRHS----ACSLPDGNVLILGGVTEG-----P-AMLLYNVTEEIFKDVTPKDEFFQ 536 (695)
T ss_dssp CCCCEEEETTTTEEEECCCCSBCCBSCE----EEECTTSCEEEECCBCSS-----C-SEEEEETTTTEEEECCCSSGGGG
T ss_pred cccEEEEeCCCCcEEECCCCCCCcccce----EEEEcCCEEEEECCCCCC-----C-CEEEEECCCCceEEccCCCCCCC
Confidence 3569999999999999987776655553 6664 9999999876532 2 6999999999999985 443
Q ss_pred ccccCCCCeeEEEEeC---CeEEEEEecCC-----CCEEEEEEECCCCc------eeEEEEecc-CCceeeeEEEeeCCE
Q 045559 245 CLLEISPKHTVFGLYN---DSLSFLVFDER-----ESCFDIWTMKERYH------WTKEFSTTP-ILAVDAPIGFWKNDT 309 (335)
Q Consensus 245 ~~~~~~~~~~~l~~~~---g~L~~~~~~~~-----~~~~~IW~l~~~~~------W~~~~~i~~-~~~~~~~~~~~~~~~ 309 (335)
... ....+.++ |+|++++.... ...+.+|-++. .. |.++... | .+.......+.++++
T Consensus 537 ~r~-----~~~a~v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~-~~w~~~~~W~~~~~~-p~~~R~~~~~~~~~~~~ 609 (695)
T 2zwa_A 537 NSL-----VSAGLEFDPVSKQGIILGGGFMDQTTVSDKAIIFKYDA-ENATEPITVIKKLQH-PLFQRYGSQIKYITPRK 609 (695)
T ss_dssp SCC-----BSCEEEEETTTTEEEEECCBCTTSSCBCCEEEEEEECT-TCSSCCEEEEEEEEC-GGGCCBSCEEEEEETTE
T ss_pred ccc-----ceeEEEEeCCCCEEEEECCcCCCCCeeeCcEEEEEccC-CccccceEEEEcCCC-CCCCcccceEEEeCCCE
Confidence 322 12223334 88999987631 23444445544 66 8877664 3 333333344454488
Q ss_pred EEEEec---------CCeEEEEeCCCCceeeccc
Q 045559 310 FFIRSN---------TEELLLYDPNSEEIIDFQH 334 (335)
Q Consensus 310 il~~~~---------~~~l~~yd~~~~~~~~v~~ 334 (335)
|++..+ ...+..||+++++|+.+.+
T Consensus 610 iyv~GG~~~~~~~~~~~~v~~yd~~t~~W~~~~~ 643 (695)
T 2zwa_A 610 LLIVGGTSPSGLFDRTNSIISLDPLSETLTSIPI 643 (695)
T ss_dssp EEEECCBCSSCCCCTTTSEEEEETTTTEEEECCC
T ss_pred EEEECCccCCCCCCCCCeEEEEECCCCeEEEeec
Confidence 887754 2469999999999997653
No 15
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=98.93 E-value=1.1e-08 Score=92.29 Aligned_cols=152 Identities=9% Similarity=0.000 Sum_probs=96.0
Q ss_pred CceEEEEEcCCCcceecCcccccccc-cCCCceeeeecceEEEEeecCCCCCccCceEEEEEEC--Cccceeee-cCCCc
Q 045559 170 SRQVFIYSFSDNSWRNFQGFEFGMYD-LDEVLDCTYHNGACHWLVPFGAFHPLCCHYVILSFDM--SDEVFEEI-LGPNC 245 (335)
Q Consensus 170 ~~~~~vyss~~~~W~~~~~~p~~~~~-~~~~~~~v~~~G~~ywl~~~~~~~~~~~~~~i~~fD~--~~e~~~~i-~~P~~ 245 (335)
...+++|+..+++|+.+..+|.+... . ..+.++|.+|.+....... .....+..||+ ++.+|+.+ ++|..
T Consensus 167 ~~~v~~yd~~~~~W~~~~~~p~~~~~~~----~~~~~~~~iyv~GG~~~~~--~~~~~v~~~d~d~~~~~W~~~~~~~~~ 240 (357)
T 2uvk_A 167 NKFLLSFDPSTQQWSYAGESPWYGTAGA----AVVNKGDKTWLINGEAKPG--LRTDAVFELDFTGNNLKWNKLAPVSSP 240 (357)
T ss_dssp CCEEEEEETTTTEEEEEEECSSCCCBSC----EEEEETTEEEEECCEEETT--EECCCEEEEECC---CEEEECCCSSTT
T ss_pred cccEEEEeCCCCcEEECCCCCCCCcccc----cEEEECCEEEEEeeecCCC--cccCceEEEEecCCCCcEEecCCCCCC
Confidence 35899999999999998766654222 3 4788999999997542110 00235777876 89999998 55433
Q ss_pred cccCCCCeeEEEEeCCeEEEEEecCC------------------CCEEEEEEECC-CCceeEEEEeccCCceeeeEEEee
Q 045559 246 LLEISPKHTVFGLYNDSLSFLVFDER------------------ESCFDIWTMKE-RYHWTKEFSTTPILAVDAPIGFWK 306 (335)
Q Consensus 246 ~~~~~~~~~~l~~~~g~L~~~~~~~~------------------~~~~~IW~l~~-~~~W~~~~~i~~~~~~~~~~~~~~ 306 (335)
... .....+..+|+|++++.... ...-++|+++. ...|.++-.+ |.+..... ++.-
T Consensus 241 ~~~---~~~~~~~~~~~iyv~GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~-p~~r~~~~-~~~~ 315 (357)
T 2uvk_A 241 DGV---AGGFAGISNDSLIFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWHNGKWDKSGEL-SQGRAYGV-SLPW 315 (357)
T ss_dssp TCC---BSCEEEEETTEEEEECCEECTTHHHHHHTTCSSTTTTCCCEECCEEEECC---CEEEEEC-SSCCBSSE-EEEE
T ss_pred ccc---ccceEEEECCEEEEEcCccccCCcccccccceeccccccceeeEEEEecCCCceeeCCCC-CCCcccce-eEEe
Confidence 221 23457889999999987421 11234566665 6899998777 65543322 2334
Q ss_pred CCEEEEEec----C---CeEEEEeCCCCceeec
Q 045559 307 NDTFFIRSN----T---EELLLYDPNSEEIIDF 332 (335)
Q Consensus 307 ~~~il~~~~----~---~~l~~yd~~~~~~~~v 332 (335)
+++|++..+ . ..++.+++++|+|.+.
T Consensus 316 ~~~i~v~GG~~~~~~~~~~v~~l~~~~~~~~~~ 348 (357)
T 2uvk_A 316 NNSLLIIGGETAGGKAVTDSVLITVKDNKVTVQ 348 (357)
T ss_dssp TTEEEEEEEECGGGCEEEEEEEEEC-CCSCEEE
T ss_pred CCEEEEEeeeCCCCCEeeeEEEEEEcCcEeEee
Confidence 788877654 1 3588999999999765
No 16
>2e31_A FBS1, F-box only protein 2; ubiquitin, SCF, ubiquitin ligase, FBS1; 2.40A {Mus musculus} PDB: 2e32_A
Probab=98.68 E-value=4.8e-09 Score=91.05 Aligned_cols=41 Identities=22% Similarity=0.534 Sum_probs=38.9
Q ss_pred ChhhHhccCChhhhh-hheeccccchhhhCChHhHHHHHhhc
Q 045559 1 MVVEILSKFPVKSLL-RFRCVCKSWYELFESPSFISKHLKAG 41 (335)
Q Consensus 1 ll~eIL~rLP~k~l~-r~r~VcK~W~~li~sp~F~~~~~~~~ 41 (335)
||.+||++||+++|+ ||++|||+|++++++|.|.+++.++.
T Consensus 58 ll~~Il~~Lp~~~L~~r~~~VCk~Wr~l~~~~~~w~~~~~~~ 99 (297)
T 2e31_A 58 LLLRVLAELPATELVQACRLVCLRWKELVDGAPLWLLKCQQE 99 (297)
T ss_dssp HHHHHHHTSCHHHHHHTGGGTCHHHHHHHTSHHHHHHHHHHT
T ss_pred HHHHHHHcCCHHHHHHHHHHHhHHHHHHhcChHHHHHHhhcc
Confidence 578999999999999 99999999999999999999998875
No 17
>1fs1_A SKP2 F-BOX, cyclin A/CDK2-associated P19; F-BOX, LRR, leucine-rich repeat, SCF, ubiquitin, ubiquitin protein ligase; 1.80A {Homo sapiens} SCOP: a.158.1.1 PDB: 1ldk_E
Probab=98.58 E-value=8.2e-09 Score=65.88 Aligned_cols=36 Identities=31% Similarity=0.600 Sum_probs=32.0
Q ss_pred ChhhHhccCChhhhhhheeccccchhhhCChHhHHH
Q 045559 1 MVVEILSKFPVKSLLRFRCVCKSWYELFESPSFISK 36 (335)
Q Consensus 1 ll~eIL~rLP~k~l~r~r~VcK~W~~li~sp~F~~~ 36 (335)
++.+||++||+++++++++|||+|+.++.++.|.+.
T Consensus 16 il~~I~~~L~~~dl~~~~~Vck~w~~~~~~~~lW~~ 51 (53)
T 1fs1_A 16 LLLGIFSCLCLPELLKVSGVCKRWYRLASDESLWQT 51 (53)
T ss_dssp HHHHHHTTSCGGGHHHHHTTCHHHHHHHTCGGGC--
T ss_pred HHHHHHHcCCHHHHHHHHHHHHHHHHHhCChHHHHh
Confidence 478999999999999999999999999999987653
No 18
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=98.52 E-value=1.9e-06 Score=84.27 Aligned_cols=201 Identities=9% Similarity=-0.063 Sum_probs=120.9
Q ss_pred eEEEEecchhhhhcCCCCcccCCcCCceeeeeEEeecCCCCCeEEEEEEEEecCccccccCCCceEEEEEcCCCcceecC
Q 045559 108 EIALYNHATRDLKFLPKLTLIDNLESIYTIMFGLGLDPKCNYYKLVYIVTYHDSELGKVLNDSRQVFIYSFSDNSWRNFQ 187 (335)
Q Consensus 108 ~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~l~~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~~~vyss~~~~W~~~~ 187 (335)
.+.++||.|++|..++.++.. ......+..+... =+++.+.. .....+++|+..++.|..+.
T Consensus 220 ~~~~yd~~t~~w~~~~~~~~~-----~~~~~~~~~~~~~---g~lyv~GG----------~~~~~v~~yd~~t~~W~~~~ 281 (656)
T 1k3i_A 220 LTSSWDPSTGIVSDRTVTVTK-----HDMFCPGISMDGN---GQIVVTGG----------NDAKKTSLYDSSSDSWIPGP 281 (656)
T ss_dssp EEEEECTTTCCBCCCEEEECS-----CCCSSCEEEECTT---SCEEEECS----------SSTTCEEEEEGGGTEEEECC
T ss_pred EEEEEeCCCCcEEeCcccCCC-----CCCccccccCCCC---CCEEEeCC----------CCCCceEEecCcCCceeECC
Confidence 578999999999999876543 1111112222221 13444421 11227999999999999987
Q ss_pred cccccccccCCCceeeee-cceEEEEeecCCCCCccCceEEEEEECCccceeeec------CCCccc-----cCCC----
Q 045559 188 GFEFGMYDLDEVLDCTYH-NGACHWLVPFGAFHPLCCHYVILSFDMSDEVFEEIL------GPNCLL-----EISP---- 251 (335)
Q Consensus 188 ~~p~~~~~~~~~~~~v~~-~G~~ywl~~~~~~~~~~~~~~i~~fD~~~e~~~~i~------~P~~~~-----~~~~---- 251 (335)
.+|.+...+ ..+.+ ||.+|.+....... .....+..||+.+++|+.++ +|.... ....
T Consensus 282 ~~~~~R~~~----s~~~~~dg~iyv~GG~~~~~--~~~~~~e~yd~~t~~W~~~~~~~~~p~~~~~~~~~~~~~~~iyv~ 355 (656)
T 1k3i_A 282 DMQVARGYQ----SSATMSDGRVFTIGGSWSGG--VFEKNGEVYSPSSKTWTSLPNAKVNPMLTADKQGLYRSDNHAWLF 355 (656)
T ss_dssp CCSSCCSSC----EEEECTTSCEEEECCCCCSS--SCCCCEEEEETTTTEEEEETTSCSGGGCCCCTTGGGTTTCSCCEE
T ss_pred CCCcccccc----ceEEecCCeEEEEeCcccCC--cccccceEeCCCCCcceeCCCccccccccccccceeecCCceEEE
Confidence 666554333 36677 99999998732110 00246889999999999862 222100 0000
Q ss_pred ------------------------------------------CeeEEE----EeCCeEEEEEecCC-------CCEEEEE
Q 045559 252 ------------------------------------------KHTVFG----LYNDSLSFLVFDER-------ESCFDIW 278 (335)
Q Consensus 252 ------------------------------------------~~~~l~----~~~g~L~~~~~~~~-------~~~~~IW 278 (335)
.....+ ..+|+|++++.... .....|+
T Consensus 356 Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~~~~~~~~~~~~~~~~av~~~~~~~~i~v~GG~~~~~~~~~~~~~~~v~ 435 (656)
T 1k3i_A 356 GWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDAMCGNAVMYDAVKGKILTFGGSPDYQDSDATTNAHIIT 435 (656)
T ss_dssp ECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEETTEECCCCBTCEEEEEETTTTEEEEECCBSSSSSSBCCCCEEEEE
T ss_pred ECCCCcEEEecCccceeeeecCCcceeecCCccccccccCCCCCCCceEeccCCCCeEEEEeCCCCCCCCCcCCcceEEE
Confidence 000112 24788988887421 1122566
Q ss_pred EECC-CCceeEEE--EeccCCceeeeEEEeeCCEEEEEecC------------CeEEEEeCCCCceeecc
Q 045559 279 TMKE-RYHWTKEF--STTPILAVDAPIGFWKNDTFFIRSNT------------EELLLYDPNSEEIIDFQ 333 (335)
Q Consensus 279 ~l~~-~~~W~~~~--~i~~~~~~~~~~~~~~~~~il~~~~~------------~~l~~yd~~~~~~~~v~ 333 (335)
+.+. ...|.+.. .+ |.+....-..+..+|+|++..+. ..+..||+++++|+++.
T Consensus 436 ~yd~~~~~W~~~~~~~m-p~~R~~~~~~~l~~g~i~v~GG~~~~~~~~~~~~~~~v~~ydp~t~~W~~~~ 504 (656)
T 1k3i_A 436 LGEPGTSPNTVFASNGL-YFARTFHTSVVLPDGSTFITGGQRRGIPFEDSTPVFTPEIYVPEQDTFYKQN 504 (656)
T ss_dssp CCSTTSCCEEEECTTCC-SSCCBSCEEEECTTSCEEEECCBSBCCTTCCCSBCCCCEEEEGGGTEEEECC
T ss_pred cCCCCCCCeeEEccCCC-CCCcccCCeEECCCCCEEEECCcccCcCcCCCCcccceEEEcCCCCceeecC
Confidence 6665 67898875 55 55544444444558888877541 45899999999998764
No 19
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=98.39 E-value=2e-06 Score=84.62 Aligned_cols=150 Identities=9% Similarity=-0.086 Sum_probs=100.7
Q ss_pred CceEEEEEcCCCcceecC-cc-----cccccccCCCceeeee--cceEEEEeecCCCCCccCceEEEEEECCccceeee-
Q 045559 170 SRQVFIYSFSDNSWRNFQ-GF-----EFGMYDLDEVLDCTYH--NGACHWLVPFGAFHPLCCHYVILSFDMSDEVFEEI- 240 (335)
Q Consensus 170 ~~~~~vyss~~~~W~~~~-~~-----p~~~~~~~~~~~~v~~--~G~~ywl~~~~~~~~~~~~~~i~~fD~~~e~~~~i- 240 (335)
...+++|+..++.|+.+. .+ |.+...+ ..+.+ +|.+|.++....... ....+..||+.+.+|+.+
T Consensus 411 ~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~h----s~~~~~~~~~lyv~GG~~~~~~--~~~dv~~yd~~t~~W~~~~ 484 (695)
T 2zwa_A 411 VNEILQLSIHYDKIDMKNIEVSSSEVPVARMCH----TFTTISRNNQLLLIGGRKAPHQ--GLSDNWIFDMKTREWSMIK 484 (695)
T ss_dssp CCCEEEEEECSSCEEEEECCCCCSCCCCCCBSC----EEEEETTTTEEEEECCBSSTTC--BCCCCEEEETTTTEEEECC
T ss_pred cCcEEEEECCCCeEEEeccCCCCCCCCccccce----EEEEEccCCEEEEEcCCCCCCC--ccccEEEEeCCCCcEEECC
Confidence 356899999999999887 42 3333334 47888 999999987543210 023589999999999999
Q ss_pred cCCCccccCCCCeeEEEEe-CCeEEEEEecCCCCEEEEEEECC-CCceeEEEEec--cCCceeeeEEE-eeC-CEEEEEe
Q 045559 241 LGPNCLLEISPKHTVFGLY-NDSLSFLVFDERESCFDIWTMKE-RYHWTKEFSTT--PILAVDAPIGF-WKN-DTFFIRS 314 (335)
Q Consensus 241 ~~P~~~~~~~~~~~~l~~~-~g~L~~~~~~~~~~~~~IW~l~~-~~~W~~~~~i~--~~~~~~~~~~~-~~~-~~il~~~ 314 (335)
++|... .....+.+ +|+|++++...... ++|+++. ...|....... |.+.......+ ..+ ++|++..
T Consensus 485 ~~p~~R-----~~h~~~~~~~~~iyv~GG~~~~~--~v~~yd~~t~~W~~~~~~g~~p~~r~~~~a~v~~~~~~~iyv~G 557 (695)
T 2zwa_A 485 SLSHTR-----FRHSACSLPDGNVLILGGVTEGP--AMLLYNVTEEIFKDVTPKDEFFQNSLVSAGLEFDPVSKQGIILG 557 (695)
T ss_dssp CCSBCC-----BSCEEEECTTSCEEEECCBCSSC--SEEEEETTTTEEEECCCSSGGGGSCCBSCEEEEETTTTEEEEEC
T ss_pred CCCCCc-----ccceEEEEcCCEEEEECCCCCCC--CEEEEECCCCceEEccCCCCCCCcccceeEEEEeCCCCEEEEEC
Confidence 566533 23345554 99999998875333 7788877 78998865421 33333232222 323 7787775
Q ss_pred cC--------CeEEEEeCCCCc------eeec
Q 045559 315 NT--------EELLLYDPNSEE------IIDF 332 (335)
Q Consensus 315 ~~--------~~l~~yd~~~~~------~~~v 332 (335)
+. +.+..||+++++ |+++
T Consensus 558 G~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~ 589 (695)
T 2zwa_A 558 GGFMDQTTVSDKAIIFKYDAENATEPITVIKK 589 (695)
T ss_dssp CBCTTSSCBCCEEEEEEECTTCSSCCEEEEEE
T ss_pred CcCCCCCeeeCcEEEEEccCCccccceEEEEc
Confidence 42 469999999999 7665
No 20
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=98.37 E-value=0.00043 Score=63.66 Aligned_cols=40 Identities=25% Similarity=0.367 Sum_probs=36.2
Q ss_pred ChhhHhccCChhhhhhheeccccchhhhCChHhHHHHHhh
Q 045559 1 MVVEILSKFPVKSLLRFRCVCKSWYELFESPSFISKHLKA 40 (335)
Q Consensus 1 ll~eIL~rLP~k~l~r~r~VcK~W~~li~sp~F~~~~~~~ 40 (335)
++.+||+.|++++|+++.+|||+|+.++.++.+.+.....
T Consensus 26 ~~~~i~~~l~~~~l~~~~~v~~~~~~~~~~~~~w~~~~~~ 65 (445)
T 2ovr_B 26 LALYVLSFLEPKDLLQAAQTCRYWRILAEDNLLWREKCKE 65 (445)
T ss_dssp HHHHHHTTSCHHHHHHHTTSCHHHHHHHTCSHHHHHHHTT
T ss_pred HHHHHHHhCCHHHHHHHHHHhHHHHhhcCchhHhhhheee
Confidence 4678999999999999999999999999999998877654
No 21
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=98.35 E-value=0.00016 Score=66.88 Aligned_cols=39 Identities=15% Similarity=0.359 Sum_probs=34.3
Q ss_pred ChhhHhccCChhhhhhheeccccchhhhCC-hHhHHHHHh
Q 045559 1 MVVEILSKFPVKSLLRFRCVCKSWYELFES-PSFISKHLK 39 (335)
Q Consensus 1 ll~eIL~rLP~k~l~r~r~VcK~W~~li~s-p~F~~~~~~ 39 (335)
|+.+||+.||+++|++++.|||+|+.++.+ +...+.+..
T Consensus 22 ~~~~i~~~l~~~~l~~~~~v~~~w~~~~~~~~~~w~~~~~ 61 (464)
T 3v7d_B 22 ISLKIFNYLQFEDIINSLGVSQNWNKIIRKSTSLWKKLLI 61 (464)
T ss_dssp HHHHHHTTSCHHHHHHHHTTCHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHhcCCHHHHHHHHHHHHHHHHHHcCCHHHHHHHHh
Confidence 478999999999999999999999999998 777666554
No 22
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=98.33 E-value=3.5e-06 Score=82.30 Aligned_cols=198 Identities=10% Similarity=-0.002 Sum_probs=113.4
Q ss_pred eEEEEecchhhhhcCCCCcccCCcCCceeeeeEEeecCCCCCeEEEEEEEEecCccccccCCCceEEEEEcCCCcceecC
Q 045559 108 EIALYNHATRDLKFLPKLTLIDNLESIYTIMFGLGLDPKCNYYKLVYIVTYHDSELGKVLNDSRQVFIYSFSDNSWRNFQ 187 (335)
Q Consensus 108 ~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~l~~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~~~vyss~~~~W~~~~ 187 (335)
.+..++|.+++|..++++|.. ....++.+..+ +++.+.......-.+.......+++|+..+++|+.+.
T Consensus 167 ~~~~~dp~~~~W~~~~~~P~~---------~~~~av~~~~g--~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~ 235 (656)
T 1k3i_A 167 SYTAPQPGLGRWGPTIDLPIV---------PAAAAIEPTSG--RVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRT 235 (656)
T ss_dssp CCCCCCTTSCEEEEEEECSSC---------CSEEEEETTTT--EEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCE
T ss_pred ccccCCCCCCeeeeeccCCCC---------ceeEEEEecCC--EEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCc
Confidence 345568889999887765543 12223233222 3444432111100000112246899999999999887
Q ss_pred cccccccccCCCceeeeecceEEEEeecCCCCCccCceEEEEEECCccceeee-cCCCccccCCCCeeEEEEe-CCeEEE
Q 045559 188 GFEFGMYDLDEVLDCTYHNGACHWLVPFGAFHPLCCHYVILSFDMSDEVFEEI-LGPNCLLEISPKHTVFGLY-NDSLSF 265 (335)
Q Consensus 188 ~~p~~~~~~~~~~~~v~~~G~~ywl~~~~~~~~~~~~~~i~~fD~~~e~~~~i-~~P~~~~~~~~~~~~l~~~-~g~L~~ 265 (335)
.+|.+..... ....+..||.+|.+..... ..+..||+.+++|..+ ++|... .....+.+ +|+|++
T Consensus 236 ~~~~~~~~~~-~~~~~~~~g~lyv~GG~~~-------~~v~~yd~~t~~W~~~~~~~~~R-----~~~s~~~~~dg~iyv 302 (656)
T 1k3i_A 236 VTVTKHDMFC-PGISMDGNGQIVVTGGNDA-------KKTSLYDSSSDSWIPGPDMQVAR-----GYQSSATMSDGRVFT 302 (656)
T ss_dssp EEECSCCCSS-CEEEECTTSCEEEECSSST-------TCEEEEEGGGTEEEECCCCSSCC-----SSCEEEECTTSCEEE
T ss_pred ccCCCCCCcc-ccccCCCCCCEEEeCCCCC-------CceEEecCcCCceeECCCCCccc-----cccceEEecCCeEEE
Confidence 6554422211 0023457899999987542 2689999999999988 555433 33456777 999999
Q ss_pred EEecC----CCCEEEEEEECCCCceeEEEEe--ccC--Cc---------eeeeEEEeeCCEEEEEecCCeEEEEeCCCCc
Q 045559 266 LVFDE----RESCFDIWTMKERYHWTKEFST--TPI--LA---------VDAPIGFWKNDTFFIRSNTEELLLYDPNSEE 328 (335)
Q Consensus 266 ~~~~~----~~~~~~IW~l~~~~~W~~~~~i--~~~--~~---------~~~~~~~~~~~~il~~~~~~~l~~yd~~~~~ 328 (335)
++... ....+++|-.+ ...|..+-.. .|+ .. ....++ ..+|.++.......+..||+++++
T Consensus 303 ~GG~~~~~~~~~~~e~yd~~-t~~W~~~~~~~~~p~~~~~~~~~~~~~~~iyv~G-g~~g~~~~~~~~~~v~~yd~~~~~ 380 (656)
T 1k3i_A 303 IGGSWSGGVFEKNGEVYSPS-SKTWTSLPNAKVNPMLTADKQGLYRSDNHAWLFG-WKKGSVFQAGPSTAMNWYYTSGSG 380 (656)
T ss_dssp ECCCCCSSSCCCCEEEEETT-TTEEEEETTSCSGGGCCCCTTGGGTTTCSCCEEE-CGGGCEEECCSSSEEEEEECSTTC
T ss_pred EeCcccCCcccccceEeCCC-CCcceeCCCccccccccccccceeecCCceEEEE-CCCCcEEEecCccceeeeecCCcc
Confidence 98842 12345555444 4889875211 111 10 011222 224555544445679999999998
Q ss_pred eee
Q 045559 329 IID 331 (335)
Q Consensus 329 ~~~ 331 (335)
|.+
T Consensus 381 w~~ 383 (656)
T 1k3i_A 381 DVK 383 (656)
T ss_dssp EEE
T ss_pred eee
Confidence 754
No 23
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=98.16 E-value=0.00033 Score=64.34 Aligned_cols=40 Identities=30% Similarity=0.484 Sum_probs=35.1
Q ss_pred ChhhHhccCChhhhhhheeccccchhhhCChHhHHHHHhh
Q 045559 1 MVVEILSKFPVKSLLRFRCVCKSWYELFESPSFISKHLKA 40 (335)
Q Consensus 1 ll~eIL~rLP~k~l~r~r~VcK~W~~li~sp~F~~~~~~~ 40 (335)
|+.+||+.|++++|+++.+|||+|+.++.++.+.+....+
T Consensus 22 ~~~~i~~~l~~~~l~~~~~v~~~w~~~~~~~~~w~~~~~~ 61 (435)
T 1p22_A 22 IAENILSYLDAKSLCAAELVCKEWYRVTSDGMLWKKLIER 61 (435)
T ss_dssp HHHHHHTTCCHHHHHHHHHHCHHHHHHHHHTTHHHHHHHH
T ss_pred HHHHHHhcCCHHHHHHHHHHHHHHHHHhcChHHHHHHHHh
Confidence 3567999999999999999999999999998877776654
No 24
>3l2o_B F-box only protein 4; small G protein fold, UBL conjugation pathway, ubiquitin Pro ligase, protein binding-cell cycle complex; 2.80A {Homo sapiens}
Probab=97.14 E-value=0.00013 Score=62.70 Aligned_cols=42 Identities=19% Similarity=0.223 Sum_probs=38.5
Q ss_pred ChhhHhccCChhhhhhheeccccchhhhCChHhHHHHHhhcC
Q 045559 1 MVVEILSKFPVKSLLRFRCVCKSWYELFESPSFISKHLKAGN 42 (335)
Q Consensus 1 ll~eIL~rLP~k~l~r~r~VcK~W~~li~sp~F~~~~~~~~~ 42 (335)
++..||+.|++++|+++.+|||+||.+..++.-.+.+..+..
T Consensus 12 i~l~IlsfL~p~DL~~l~~vcr~Wr~la~D~~LWr~~l~rd~ 53 (312)
T 3l2o_B 12 VQLYILSFLSPHDLCQLGSTNHYWNETVRDPILWRYFLLRDL 53 (312)
T ss_dssp HHHHHHHTSCHHHHHHHHTTCHHHHHHHTCHHHHHHHHHSSG
T ss_pred HHHHHHhcCCHHHHHHHHHHHHHHHHHhccchHHHHHHhccC
Confidence 367899999999999999999999999999999999888755
No 25
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=95.55 E-value=0.0029 Score=55.80 Aligned_cols=33 Identities=33% Similarity=0.670 Sum_probs=29.7
Q ss_pred ChhhHhccCChhhhhhheeccccchhhhCChHh
Q 045559 1 MVVEILSKFPVKSLLRFRCVCKSWYELFESPSF 33 (335)
Q Consensus 1 ll~eIL~rLP~k~l~r~r~VcK~W~~li~sp~F 33 (335)
++.+||.+|+.+++++++.|||+|+.++.+|..
T Consensus 16 il~~If~~L~~~d~~~~~~vc~~W~~~~~~~~~ 48 (336)
T 2ast_B 16 LLLGIFSCLCLPELLKVSGVCKRWYRLASDESL 48 (336)
T ss_dssp HHHHHHTTSCHHHHHHTTSSCHHHHHHHTCSTT
T ss_pred HHHHHHHhCCHHHHHHHHHHHHHHHHHhcCchh
Confidence 468999999999999999999999999977664
No 26
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=95.43 E-value=1.2 Score=38.73 Aligned_cols=193 Identities=7% Similarity=-0.067 Sum_probs=98.4
Q ss_pred cceEEEee-cCceEEEEecchhhh-hcCCCCcccCCcCCceeeeeEEeecCCCCCeEEEEEEEEecCccccccCCCceEE
Q 045559 97 EGLFIMFI-GGDEIALYNHATRDL-KFLPKLTLIDNLESIYTIMFGLGLDPKCNYYKLVYIVTYHDSELGKVLNDSRQVF 174 (335)
Q Consensus 97 ~GLl~~~~-~~~~~~V~NP~T~~~-~~LP~~~~~~~~~~~~~~~~~l~~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~~~ 174 (335)
++-+.+.. ....+.|+|+.|++. ..++.... ..++.+++. . +++... ...-.+.
T Consensus 53 ~~~lyv~~~~~~~v~viD~~t~~~~~~i~~~~~----------p~~i~~~~~--g-~lyv~~-----------~~~~~v~ 108 (328)
T 3dsm_A 53 DGIGWIVVNNSHVIFAIDINTFKEVGRITGFTS----------PRYIHFLSD--E-KAYVTQ-----------IWDYRIF 108 (328)
T ss_dssp TTEEEEEEGGGTEEEEEETTTCCEEEEEECCSS----------EEEEEEEET--T-EEEEEE-----------BSCSEEE
T ss_pred CCEEEEEEcCCCEEEEEECcccEEEEEcCCCCC----------CcEEEEeCC--C-eEEEEE-----------CCCCeEE
Confidence 44444443 357899999999876 44643222 235555543 2 443331 1234688
Q ss_pred EEEcCCCcce-ecCcccc-cccccCCCceeeeecceEEEEeecCCCCCccCceEEEEEECCccceee-ecCCCccccCCC
Q 045559 175 IYSFSDNSWR-NFQGFEF-GMYDLDEVLDCTYHNGACHWLVPFGAFHPLCCHYVILSFDMSDEVFEE-ILGPNCLLEISP 251 (335)
Q Consensus 175 vyss~~~~W~-~~~~~p~-~~~~~~~~~~~v~~~G~~ywl~~~~~~~~~~~~~~i~~fD~~~e~~~~-i~~P~~~~~~~~ 251 (335)
+++.++++-. .++.... .....+ ..-+.-+|.+|...... ...|..+|+++.+... ++.....
T Consensus 109 ~iD~~t~~~~~~i~~g~~~~~~~~p--~~i~~~~~~lyv~~~~~-------~~~v~viD~~t~~~~~~i~~g~~p----- 174 (328)
T 3dsm_A 109 IINPKTYEITGYIECPDMDMESGST--EQMVQYGKYVYVNCWSY-------QNRILKIDTETDKVVDELTIGIQP----- 174 (328)
T ss_dssp EEETTTTEEEEEEECTTCCTTTCBC--CCEEEETTEEEEEECTT-------CCEEEEEETTTTEEEEEEECSSCB-----
T ss_pred EEECCCCeEEEEEEcCCccccCCCc--ceEEEECCEEEEEcCCC-------CCEEEEEECCCCeEEEEEEcCCCc-----
Confidence 8888876532 1111010 000011 11333566777664311 3379999998776533 3433221
Q ss_pred CeeEEEEeCCeEEEEEecCCCC------EEEEEEECC-CCceeEEEEeccCCceeeeEEEeeCCEEEEEecCCeEEEEeC
Q 045559 252 KHTVFGLYNDSLSFLVFDERES------CFDIWTMKE-RYHWTKEFSTTPILAVDAPIGFWKNDTFFIRSNTEELLLYDP 324 (335)
Q Consensus 252 ~~~~l~~~~g~L~~~~~~~~~~------~~~IW~l~~-~~~W~~~~~i~~~~~~~~~~~~~~~~~il~~~~~~~l~~yd~ 324 (335)
... ...-+|++++........ .-.|++++. +..-.+...+ +......-+++.++++.++..+. .++.+|+
T Consensus 175 ~~i-~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~-~~g~~p~~la~~~d~~~lyv~~~-~v~~~d~ 251 (328)
T 3dsm_A 175 TSL-VMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFKF-KLGDWPSEVQLNGTRDTLYWINN-DIWRMPV 251 (328)
T ss_dssp CCC-EECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEEEC-CTTCCCEEEEECTTSCEEEEESS-SEEEEET
T ss_pred cce-EEcCCCCEEEEECCCccCCccccCCceEEEEECCCCeEEEEEec-CCCCCceeEEEecCCCEEEEEcc-EEEEEEC
Confidence 111 123468877776542000 123455554 2443333333 22223444556666776555554 8999999
Q ss_pred CCCcee
Q 045559 325 NSEEII 330 (335)
Q Consensus 325 ~~~~~~ 330 (335)
+++++.
T Consensus 252 ~t~~~~ 257 (328)
T 3dsm_A 252 EADRVP 257 (328)
T ss_dssp TCSSCC
T ss_pred CCCcee
Confidence 998864
No 27
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=95.20 E-value=1.7 Score=39.18 Aligned_cols=185 Identities=6% Similarity=0.004 Sum_probs=97.0
Q ss_pred ceEEEEecchhhhhcCCCCcccCCcCCceeeeeEEeecCCCCCeEEEEEEEEecCccccccCCCceEEEEEcCCCcceec
Q 045559 107 DEIALYNHATRDLKFLPKLTLIDNLESIYTIMFGLGLDPKCNYYKLVYIVTYHDSELGKVLNDSRQVFIYSFSDNSWRNF 186 (335)
Q Consensus 107 ~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~l~~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~~~vyss~~~~W~~~ 186 (335)
..++++|..|++.+.+...+.. ...+.+.|.. .+-++.. . ......+.+++.+++..+.+
T Consensus 203 ~~i~~~d~~tg~~~~l~~~~~~---------~~~~~~spdg-~~la~~~-~---------~~g~~~i~~~d~~~~~~~~l 262 (415)
T 2hqs_A 203 SALVIQTLANGAVRQVASFPRH---------NGAPAFSPDG-SKLAFAL-S---------KTGSLNLYVMDLASGQIRQV 262 (415)
T ss_dssp CEEEEEETTTCCEEEEECCSSC---------EEEEEECTTS-SEEEEEE-C---------TTSSCEEEEEETTTCCEEEC
T ss_pred cEEEEEECCCCcEEEeecCCCc---------ccCEEEcCCC-CEEEEEE-e---------cCCCceEEEEECCCCCEEeC
Confidence 4899999999987765433222 4566677643 3322222 1 12245788889888776554
Q ss_pred CcccccccccCCCceeeeecce-EEEEeecCCCCCccCceEEEEEECCccceeeecCCCccccCCCCeeEEEE-eCCe-E
Q 045559 187 QGFEFGMYDLDEVLDCTYHNGA-CHWLVPFGAFHPLCCHYVILSFDMSDEVFEEILGPNCLLEISPKHTVFGL-YNDS-L 263 (335)
Q Consensus 187 ~~~p~~~~~~~~~~~~v~~~G~-~ywl~~~~~~~~~~~~~~i~~fD~~~e~~~~i~~P~~~~~~~~~~~~l~~-~~g~-L 263 (335)
...+.... . ....-+|. +++....+. ...|..+|+.+.....+..... ....+.. -+|+ |
T Consensus 263 ~~~~~~~~-~----~~~spdg~~l~~~s~~~g------~~~i~~~d~~~~~~~~l~~~~~------~~~~~~~spdG~~l 325 (415)
T 2hqs_A 263 TDGRSNNT-E----PTWFPDSQNLAFTSDQAG------RPQVYKVNINGGAPQRITWEGS------QNQDADVSSDGKFM 325 (415)
T ss_dssp CCCSSCEE-E----EEECTTSSEEEEEECTTS------SCEEEEEETTSSCCEECCCSSS------EEEEEEECTTSSEE
T ss_pred cCCCCccc-c----eEECCCCCEEEEEECCCC------CcEEEEEECCCCCEEEEecCCC------cccCeEECCCCCEE
Confidence 32211100 0 01122564 444443221 3478888988776544422211 1112232 3666 5
Q ss_pred EEEEecCCCCEEEEEEECCCCceeEEEEeccCCceeeeEEEeeCCE-EEEEecCC---eEEEEeCCCCceeecc
Q 045559 264 SFLVFDERESCFDIWTMKERYHWTKEFSTTPILAVDAPIGFWKNDT-FFIRSNTE---ELLLYDPNSEEIIDFQ 333 (335)
Q Consensus 264 ~~~~~~~~~~~~~IW~l~~~~~W~~~~~i~~~~~~~~~~~~~~~~~-il~~~~~~---~l~~yd~~~~~~~~v~ 333 (335)
+..........+.+|-++. .... .+ ........+.+.++|+ |++...+. .|+.+|+++++.+.+.
T Consensus 326 ~~~~~~~g~~~i~~~d~~~-~~~~---~l-~~~~~~~~~~~spdg~~l~~~s~~~~~~~l~~~d~~g~~~~~l~ 394 (415)
T 2hqs_A 326 VMVSSNGGQQHIAKQDLAT-GGVQ---VL-SSTFLDETPSLAPNGTMVIYSSSQGMGSVLNLVSTDGRFKARLP 394 (415)
T ss_dssp EEEEECSSCEEEEEEETTT-CCEE---EC-CCSSSCEEEEECTTSSEEEEEEEETTEEEEEEEETTSCCEEECC
T ss_pred EEEECcCCceEEEEEECCC-CCEE---Ee-cCCCCcCCeEEcCCCCEEEEEEcCCCccEEEEEECCCCcEEEee
Confidence 5555543234566666554 4332 23 1112334455677887 44444433 7999999988877653
No 28
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=95.18 E-value=1 Score=37.69 Aligned_cols=114 Identities=10% Similarity=0.035 Sum_probs=73.1
Q ss_pred eeee-ecceEEEEeecCCCCCccCceEEEEEECCccce-eeecCCCccccCCCCeeEEEEeCCeEEEEEecCCCCEEEEE
Q 045559 201 DCTY-HNGACHWLVPFGAFHPLCCHYVILSFDMSDEVF-EEILGPNCLLEISPKHTVFGLYNDSLSFLVFDERESCFDIW 278 (335)
Q Consensus 201 ~~v~-~~G~~ywl~~~~~~~~~~~~~~i~~fD~~~e~~-~~i~~P~~~~~~~~~~~~l~~~~g~L~~~~~~~~~~~~~IW 278 (335)
+++. .+|.+|.-+.... ...|..+|+++.+- ..+++|... ....++..+++|+++... .+. +|
T Consensus 24 qGL~~~~~~LyestG~~g------~S~v~~vD~~tgkv~~~~~l~~~~-----fgeGi~~~~~~ly~ltw~--~~~--v~ 88 (243)
T 3mbr_X 24 EGLFYLRGHLYESTGETG------RSSVRKVDLETGRILQRAEVPPPY-----FGAGIVAWRDRLIQLTWR--NHE--GF 88 (243)
T ss_dssp EEEEEETTEEEEEECCTT------SCEEEEEETTTCCEEEEEECCTTC-----CEEEEEEETTEEEEEESS--SSE--EE
T ss_pred ccEEEECCEEEEECCCCC------CceEEEEECCCCCEEEEEeCCCCc-----ceeEEEEeCCEEEEEEee--CCE--EE
Confidence 3544 4556666554322 34899999988766 445777643 233467778999998754 444 55
Q ss_pred EECCCCceeEEEEeccCCceeeeEEEeeCCE-EEEEecCCeEEEEeCCCCce-eecc
Q 045559 279 TMKERYHWTKEFSTTPILAVDAPIGFWKNDT-FFIRSNTEELLLYDPNSEEI-IDFQ 333 (335)
Q Consensus 279 ~l~~~~~W~~~~~i~~~~~~~~~~~~~~~~~-il~~~~~~~l~~yd~~~~~~-~~v~ 333 (335)
+.+. ..-.++.++ +... .+.++..+++ +++...+.+|..+|++|.+. ..|+
T Consensus 89 v~D~-~tl~~~~ti-~~~~--~Gwglt~dg~~L~vSdgs~~l~~iDp~t~~~~~~I~ 141 (243)
T 3mbr_X 89 VYDL-ATLTPRARF-RYPG--EGWALTSDDSHLYMSDGTAVIRKLDPDTLQQVGSIK 141 (243)
T ss_dssp EEET-TTTEEEEEE-ECSS--CCCEEEECSSCEEEECSSSEEEEECTTTCCEEEEEE
T ss_pred EEEC-CcCcEEEEE-eCCC--CceEEeeCCCEEEEECCCCeEEEEeCCCCeEEEEEE
Confidence 6664 344566677 5553 4556666666 66666678899999999655 4444
No 29
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=94.37 E-value=2.5 Score=37.12 Aligned_cols=187 Identities=11% Similarity=0.022 Sum_probs=97.0
Q ss_pred eEEEee-cCceEEEEecchhhhhcCCCCcccCCcCCceeeeeEEeecCCCCCeEEEEEEEEecCccccccCCCceEEEEE
Q 045559 99 LFIMFI-GGDEIALYNHATRDLKFLPKLTLIDNLESIYTIMFGLGLDPKCNYYKLVYIVTYHDSELGKVLNDSRQVFIYS 177 (335)
Q Consensus 99 Ll~~~~-~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~l~~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~~~vys 177 (335)
.|.+.. ....+.++|+.|++....-..... ...+.+++.. .+-++.. ...-.+.+++
T Consensus 87 ~l~~~~~~~~~v~v~d~~~~~~~~~~~~~~~---------~~~~~~s~dg-~~l~~~~------------~~~~~v~~~d 144 (391)
T 1l0q_A 87 QVYVTNMASSTLSVIDTTSNTVAGTVKTGKS---------PLGLALSPDG-KKLYVTN------------NGDKTVSVIN 144 (391)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEEEECSSS---------EEEEEECTTS-SEEEEEE------------TTTTEEEEEE
T ss_pred EEEEEECCCCEEEEEECCCCeEEEEEeCCCC---------cceEEECCCC-CEEEEEe------------CCCCEEEEEE
Confidence 343444 357899999999876543222111 3566666643 3322221 1234788888
Q ss_pred cCCCcceecCcccccccccCCCceeeeecceEEEEeecCCCCCccCceEEEEEECCccceeee-cCCCccccCCCCeeEE
Q 045559 178 FSDNSWRNFQGFEFGMYDLDEVLDCTYHNGACHWLVPFGAFHPLCCHYVILSFDMSDEVFEEI-LGPNCLLEISPKHTVF 256 (335)
Q Consensus 178 s~~~~W~~~~~~p~~~~~~~~~~~~v~~~G~~ywl~~~~~~~~~~~~~~i~~fD~~~e~~~~i-~~P~~~~~~~~~~~~l 256 (335)
.+++.....-...... . .....-+|..-+++... ...|..+|+.+.+.... ..... ...+
T Consensus 145 ~~~~~~~~~~~~~~~~--~---~~~~~~dg~~l~~~~~~-------~~~v~~~d~~~~~~~~~~~~~~~-------~~~~ 205 (391)
T 1l0q_A 145 TVTKAVINTVSVGRSP--K---GIAVTPDGTKVYVANFD-------SMSISVIDTVTNSVIDTVKVEAA-------PSGI 205 (391)
T ss_dssp TTTTEEEEEEECCSSE--E---EEEECTTSSEEEEEETT-------TTEEEEEETTTTEEEEEEECSSE-------EEEE
T ss_pred CCCCcEEEEEecCCCc--c---eEEECCCCCEEEEEeCC-------CCEEEEEECCCCeEEEEEecCCC-------ccce
Confidence 8876543221110001 0 01222245433333332 33688899887655433 32211 1123
Q ss_pred EEe-CCe-EEEEEecCCCCEEEEEEECCCCceeEEEEeccCCceeeeEEEeeCCEEE-EE-ecCCeEEEEeCCCCcee
Q 045559 257 GLY-NDS-LSFLVFDERESCFDIWTMKERYHWTKEFSTTPILAVDAPIGFWKNDTFF-IR-SNTEELLLYDPNSEEII 330 (335)
Q Consensus 257 ~~~-~g~-L~~~~~~~~~~~~~IW~l~~~~~W~~~~~i~~~~~~~~~~~~~~~~~il-~~-~~~~~l~~yd~~~~~~~ 330 (335)
... +|+ |++.........+.+|-++. . .....+ +......-+.+.++|+.+ +. ..++.+..||+++++..
T Consensus 206 ~~~~~g~~l~~~~~~~~~~~v~~~d~~~-~--~~~~~~-~~~~~~~~~~~s~dg~~l~~s~~~d~~v~v~d~~~~~~~ 279 (391)
T 1l0q_A 206 AVNPEGTKAYVTNVDKYFNTVSMIDTGT-N--KITARI-PVGPDPAGIAVTPDGKKVYVALSFXNTVSVIDTATNTIT 279 (391)
T ss_dssp EECTTSSEEEEEEECSSCCEEEEEETTT-T--EEEEEE-ECCSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEE
T ss_pred EECCCCCEEEEEecCcCCCcEEEEECCC-C--eEEEEE-ecCCCccEEEEccCCCEEEEEcCCCCEEEEEECCCCcEE
Confidence 332 454 55555422257888888775 3 334455 333223345566777744 44 34678999999987764
No 30
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=94.30 E-value=1.4 Score=37.32 Aligned_cols=112 Identities=15% Similarity=0.078 Sum_probs=71.0
Q ss_pred eeecceEEEEeecCCCCCccCceEEEEEECCccce-eeecCCCccccCCCCeeEEEEeCCeEEEEEecCCCCEEEEEEEC
Q 045559 203 TYHNGACHWLVPFGAFHPLCCHYVILSFDMSDEVF-EEILGPNCLLEISPKHTVFGLYNDSLSFLVFDERESCFDIWTMK 281 (335)
Q Consensus 203 v~~~G~~ywl~~~~~~~~~~~~~~i~~fD~~~e~~-~~i~~P~~~~~~~~~~~~l~~~~g~L~~~~~~~~~~~~~IW~l~ 281 (335)
.+.+|.+|.-+.... ...|..+|+++.+. ..+++|+.. ....+...+++|+++... .+. +|+.|
T Consensus 49 ~~~~~~LyestG~~g------~S~v~~vD~~Tgkv~~~~~l~~~~-----FgeGit~~g~~ly~ltw~--~~~--v~v~D 113 (262)
T 3nol_A 49 FYRNGYFYESTGLNG------RSSIRKVDIESGKTLQQIELGKRY-----FGEGISDWKDKIVGLTWK--NGL--GFVWN 113 (262)
T ss_dssp EEETTEEEEEEEETT------EEEEEEECTTTCCEEEEEECCTTC-----CEEEEEEETTEEEEEESS--SSE--EEEEE
T ss_pred EEECCEEEEECCCCC------CceEEEEECCCCcEEEEEecCCcc-----ceeEEEEeCCEEEEEEee--CCE--EEEEE
Confidence 345677777655432 45899999998766 444776532 233467778899999765 444 45666
Q ss_pred CCCceeEEEEeccCCceeeeEEEeeCCE-EEEEecCCeEEEEeCCCCce-eecc
Q 045559 282 ERYHWTKEFSTTPILAVDAPIGFWKNDT-FFIRSNTEELLLYDPNSEEI-IDFQ 333 (335)
Q Consensus 282 ~~~~W~~~~~i~~~~~~~~~~~~~~~~~-il~~~~~~~l~~yd~~~~~~-~~v~ 333 (335)
. ..-..+.++ +... ...++..+++ ++...+..++...|++|.+. ..|.
T Consensus 114 ~-~t~~~~~ti-~~~~--eG~glt~dg~~L~~SdGs~~i~~iDp~T~~v~~~I~ 163 (262)
T 3nol_A 114 I-RNLRQVRSF-NYDG--EGWGLTHNDQYLIMSDGTPVLRFLDPESLTPVRTIT 163 (262)
T ss_dssp T-TTCCEEEEE-ECSS--CCCCEEECSSCEEECCSSSEEEEECTTTCSEEEEEE
T ss_pred C-ccCcEEEEE-ECCC--CceEEecCCCEEEEECCCCeEEEEcCCCCeEEEEEE
Confidence 4 334566677 5543 4456666766 45555577899999998554 4443
No 31
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=94.11 E-value=2.8 Score=36.76 Aligned_cols=188 Identities=9% Similarity=0.043 Sum_probs=96.1
Q ss_pred cccc-eEEEee-cCceEEEEecchhhhhcCCCCcccCCcCCceeeeeEEeecCCCCCeEEEEEEEEecCccccccCCCce
Q 045559 95 PFEG-LFIMFI-GGDEIALYNHATRDLKFLPKLTLIDNLESIYTIMFGLGLDPKCNYYKLVYIVTYHDSELGKVLNDSRQ 172 (335)
Q Consensus 95 s~~G-Ll~~~~-~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~l~~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~ 172 (335)
+.+| .+.+.. ....+.++|+.|++....-..... ...+.++|.. .+-++.. ...-.
T Consensus 40 s~dg~~l~~~~~~d~~i~v~d~~~~~~~~~~~~~~~---------v~~~~~spdg-~~l~~~~------------~~~~~ 97 (391)
T 1l0q_A 40 SPDGTKVYVANAHSNDVSIIDTATNNVIATVPAGSS---------PQGVAVSPDG-KQVYVTN------------MASST 97 (391)
T ss_dssp CTTSSEEEEEEGGGTEEEEEETTTTEEEEEEECSSS---------EEEEEECTTS-SEEEEEE------------TTTTE
T ss_pred CCCCCEEEEECCCCCeEEEEECCCCeEEEEEECCCC---------ccceEECCCC-CEEEEEE------------CCCCE
Confidence 3344 343343 467899999998876543222112 3566677643 3222221 12346
Q ss_pred EEEEEcCCCcceecCcccccccccCCCceeeeecceEEEEeecCCCCCccCceEEEEEECCccceeee-cCCCccccCCC
Q 045559 173 VFIYSFSDNSWRNFQGFEFGMYDLDEVLDCTYHNGACHWLVPFGAFHPLCCHYVILSFDMSDEVFEEI-LGPNCLLEISP 251 (335)
Q Consensus 173 ~~vyss~~~~W~~~~~~p~~~~~~~~~~~~v~~~G~~ywl~~~~~~~~~~~~~~i~~fD~~~e~~~~i-~~P~~~~~~~~ 251 (335)
+.+|+.+++.-...-........ ....-+|...+++... ...|..+|+.+.+.... .....
T Consensus 98 v~v~d~~~~~~~~~~~~~~~~~~-----~~~s~dg~~l~~~~~~-------~~~v~~~d~~~~~~~~~~~~~~~------ 159 (391)
T 1l0q_A 98 LSVIDTTSNTVAGTVKTGKSPLG-----LALSPDGKKLYVTNNG-------DKTVSVINTVTKAVINTVSVGRS------ 159 (391)
T ss_dssp EEEEETTTTEEEEEEECSSSEEE-----EEECTTSSEEEEEETT-------TTEEEEEETTTTEEEEEEECCSS------
T ss_pred EEEEECCCCeEEEEEeCCCCcce-----EEECCCCCEEEEEeCC-------CCEEEEEECCCCcEEEEEecCCC------
Confidence 88888887653222110000100 1222345533333332 34788899887655433 32211
Q ss_pred CeeEEEEe-CCe-EEEEEecCCCCEEEEEEECCCCceeEEEEeccCCceeeeEEEeeCCEE-EEEe---cCCeEEEEeCC
Q 045559 252 KHTVFGLY-NDS-LSFLVFDERESCFDIWTMKERYHWTKEFSTTPILAVDAPIGFWKNDTF-FIRS---NTEELLLYDPN 325 (335)
Q Consensus 252 ~~~~l~~~-~g~-L~~~~~~~~~~~~~IW~l~~~~~W~~~~~i~~~~~~~~~~~~~~~~~i-l~~~---~~~~l~~yd~~ 325 (335)
...+... +|+ |++.... .+.+.+|-++. . .....+ +......-+.+.++|+. ++.. .+..+..||++
T Consensus 160 -~~~~~~~~dg~~l~~~~~~--~~~v~~~d~~~-~--~~~~~~-~~~~~~~~~~~~~~g~~l~~~~~~~~~~~v~~~d~~ 232 (391)
T 1l0q_A 160 -PKGIAVTPDGTKVYVANFD--SMSISVIDTVT-N--SVIDTV-KVEAAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTG 232 (391)
T ss_dssp -EEEEEECTTSSEEEEEETT--TTEEEEEETTT-T--EEEEEE-ECSSEEEEEEECTTSSEEEEEEECSSCCEEEEEETT
T ss_pred -cceEEECCCCCEEEEEeCC--CCEEEEEECCC-C--eEEEEE-ecCCCccceEECCCCCEEEEEecCcCCCcEEEEECC
Confidence 1223332 454 4444433 57888998775 3 333444 33333344556667764 4444 46789999998
Q ss_pred CCce
Q 045559 326 SEEI 329 (335)
Q Consensus 326 ~~~~ 329 (335)
+++.
T Consensus 233 ~~~~ 236 (391)
T 1l0q_A 233 TNKI 236 (391)
T ss_dssp TTEE
T ss_pred CCeE
Confidence 8754
No 32
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=94.03 E-value=3.3 Score=37.26 Aligned_cols=184 Identities=9% Similarity=0.076 Sum_probs=93.5
Q ss_pred ceEEEEecchhhhhcCCCCcccCCcCCceeeeeEEeecCCCCCeEEEEEEEEecCccccccCCCceEEEEEcCCCcceec
Q 045559 107 DEIALYNHATRDLKFLPKLTLIDNLESIYTIMFGLGLDPKCNYYKLVYIVTYHDSELGKVLNDSRQVFIYSFSDNSWRNF 186 (335)
Q Consensus 107 ~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~l~~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~~~vyss~~~~W~~~ 186 (335)
..+.++|..++..+.|...... ...+.+.|.. .+ ++.... ......+.+++.+++.-+.+
T Consensus 159 ~~i~i~d~~g~~~~~l~~~~~~---------v~~~~~Spdg-~~-la~~s~---------~~~~~~i~~~d~~tg~~~~l 218 (415)
T 2hqs_A 159 YELRVSDYDGYNQFVVHRSPQP---------LMSPAWSPDG-SK-LAYVTF---------ESGRSALVIQTLANGAVRQV 218 (415)
T ss_dssp EEEEEEETTSCSCEEEEEESSC---------EEEEEECTTS-SE-EEEEEC---------TTSSCEEEEEETTTCCEEEE
T ss_pred ceEEEEcCCCCCCEEEeCCCCc---------ceeeEEcCCC-CE-EEEEEe---------cCCCcEEEEEECCCCcEEEe
Confidence 6899999876655544322211 4556667643 32 332221 12246789999988876554
Q ss_pred CcccccccccCCCceeeeecce-EEEEeecCCCCCccCceEEEEEECCccceeeecCCCccccCCCCeeEEEEe-CCe-E
Q 045559 187 QGFEFGMYDLDEVLDCTYHNGA-CHWLVPFGAFHPLCCHYVILSFDMSDEVFEEILGPNCLLEISPKHTVFGLY-NDS-L 263 (335)
Q Consensus 187 ~~~p~~~~~~~~~~~~v~~~G~-~ywl~~~~~~~~~~~~~~i~~fD~~~e~~~~i~~P~~~~~~~~~~~~l~~~-~g~-L 263 (335)
...+.... . ....-+|. +.+....+. ...|..+|+.+.+...+..... ....+.-. +|+ |
T Consensus 219 ~~~~~~~~-~----~~~spdg~~la~~~~~~g------~~~i~~~d~~~~~~~~l~~~~~------~~~~~~~spdg~~l 281 (415)
T 2hqs_A 219 ASFPRHNG-A----PAFSPDGSKLAFALSKTG------SLNLYVMDLASGQIRQVTDGRS------NNTEPTWFPDSQNL 281 (415)
T ss_dssp ECCSSCEE-E----EEECTTSSEEEEEECTTS------SCEEEEEETTTCCEEECCCCSS------CEEEEEECTTSSEE
T ss_pred ecCCCccc-C----EEEcCCCCEEEEEEecCC------CceEEEEECCCCCEEeCcCCCC------cccceEECCCCCEE
Confidence 32211100 0 01222564 444443322 3468889998876654422111 11223333 666 5
Q ss_pred EEEEecCCCCEEEEEEECC-CCceeEEEEeccCCceeeeEEEeeCCEE-EEEec---CCeEEEEeCCCCceeec
Q 045559 264 SFLVFDERESCFDIWTMKE-RYHWTKEFSTTPILAVDAPIGFWKNDTF-FIRSN---TEELLLYDPNSEEIIDF 332 (335)
Q Consensus 264 ~~~~~~~~~~~~~IW~l~~-~~~W~~~~~i~~~~~~~~~~~~~~~~~i-l~~~~---~~~l~~yd~~~~~~~~v 332 (335)
+..... .....||.++- ... ..++........-+.+.++|+. ++... ...+..+|+++++.+.+
T Consensus 282 ~~~s~~--~g~~~i~~~d~~~~~---~~~l~~~~~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~~~~~~l 350 (415)
T 2hqs_A 282 AFTSDQ--AGRPQVYKVNINGGA---PQRITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGVQVL 350 (415)
T ss_dssp EEEECT--TSSCEEEEEETTSSC---CEECCCSSSEEEEEEECTTSSEEEEEEECSSCEEEEEEETTTCCEEEC
T ss_pred EEEECC--CCCcEEEEEECCCCC---EEEEecCCCcccCeEECCCCCEEEEEECcCCceEEEEEECCCCCEEEe
Confidence 544433 23455666654 222 1223111222233455678874 44433 24799999999887654
No 33
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=94.02 E-value=1.4 Score=37.35 Aligned_cols=109 Identities=9% Similarity=0.014 Sum_probs=69.4
Q ss_pred ceEEEEeecCCCCCccCceEEEEEECCcccee-eecCCCccccCCCCeeEEEEeCCeEEEEEecCCCCEEEEEEECCCCc
Q 045559 207 GACHWLVPFGAFHPLCCHYVILSFDMSDEVFE-EILGPNCLLEISPKHTVFGLYNDSLSFLVFDERESCFDIWTMKERYH 285 (335)
Q Consensus 207 G~~ywl~~~~~~~~~~~~~~i~~fD~~~e~~~-~i~~P~~~~~~~~~~~~l~~~~g~L~~~~~~~~~~~~~IW~l~~~~~ 285 (335)
|.+|.-+.... ...|..+|+.+.+-. .+++|... ....++..+++|++.... .+. +++.+. ..
T Consensus 32 g~Lyvstg~~~------~s~v~~iD~~tg~v~~~i~l~~~~-----fgeGi~~~g~~lyv~t~~--~~~--v~viD~-~t 95 (266)
T 2iwa_A 32 DTLFESTGLYG------RSSVRQVALQTGKVENIHKMDDSY-----FGEGLTLLNEKLYQVVWL--KNI--GFIYDR-RT 95 (266)
T ss_dssp TEEEEEECSTT------TCEEEEEETTTCCEEEEEECCTTC-----CEEEEEEETTEEEEEETT--CSE--EEEEET-TT
T ss_pred CeEEEECCCCC------CCEEEEEECCCCCEEEEEecCCCc-----ceEEEEEeCCEEEEEEec--CCE--EEEEEC-CC
Confidence 67777654321 348999999877654 44665432 223456667889998764 444 555664 34
Q ss_pred eeEEEEeccCCceeeeEEEeeCCE-EEEEecCCeEEEEeCCCCce-eecc
Q 045559 286 WTKEFSTTPILAVDAPIGFWKNDT-FFIRSNTEELLLYDPNSEEI-IDFQ 333 (335)
Q Consensus 286 W~~~~~i~~~~~~~~~~~~~~~~~-il~~~~~~~l~~yd~~~~~~-~~v~ 333 (335)
-..+.+| +.. .....++..||+ +++....+.|...|++|.+. ..|.
T Consensus 96 ~~v~~~i-~~g-~~~g~glt~Dg~~l~vs~gs~~l~viD~~t~~v~~~I~ 143 (266)
T 2iwa_A 96 LSNIKNF-THQ-MKDGWGLATDGKILYGSDGTSILYEIDPHTFKLIKKHN 143 (266)
T ss_dssp TEEEEEE-ECC-SSSCCEEEECSSSEEEECSSSEEEEECTTTCCEEEEEE
T ss_pred CcEEEEE-ECC-CCCeEEEEECCCEEEEECCCCeEEEEECCCCcEEEEEE
Confidence 4566777 555 334566666766 66666677899999999664 4443
No 34
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=93.75 E-value=2.6 Score=35.17 Aligned_cols=188 Identities=11% Similarity=0.002 Sum_probs=94.7
Q ss_pred cccceEEEee-cCceEEEEecchhhhhcCCCCcccCCcCCceeeeeEEeecCCCCCeEEEEEEEEecCccccccCCCceE
Q 045559 95 PFEGLFIMFI-GGDEIALYNHATRDLKFLPKLTLIDNLESIYTIMFGLGLDPKCNYYKLVYIVTYHDSELGKVLNDSRQV 173 (335)
Q Consensus 95 s~~GLl~~~~-~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~l~~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~~ 173 (335)
..+|-+.+.. ....++++|| +++...+..+... ....++.+|+.. . +... . .....+
T Consensus 107 ~~~g~l~v~~~~~~~i~~~d~-~g~~~~~~~~~~~-------~~~~~i~~~~~g-~--l~v~-~----------~~~~~i 164 (299)
T 2z2n_A 107 GPNGDIWFTEMNGNRIGRITD-DGKIREYELPNKG-------SYPSFITLGSDN-A--LWFT-E----------NQNNAI 164 (299)
T ss_dssp CTTSCEEEEETTTTEEEEECT-TCCEEEEECSSTT-------CCEEEEEECTTS-C--EEEE-E----------TTTTEE
T ss_pred CCCCCEEEEecCCceEEEECC-CCCEEEecCCCCC-------CCCceEEEcCCC-C--EEEE-e----------CCCCEE
Confidence 3467666654 3567889999 7665544322111 113566667643 2 2211 1 112356
Q ss_pred EEEEcCCCcceecCcccccccccCCCceeeee--cceEEEEeecCCCCCccCceEEEEEECCccceeeecCCCccccCCC
Q 045559 174 FIYSFSDNSWRNFQGFEFGMYDLDEVLDCTYH--NGACHWLVPFGAFHPLCCHYVILSFDMSDEVFEEILGPNCLLEISP 251 (335)
Q Consensus 174 ~vyss~~~~W~~~~~~p~~~~~~~~~~~~v~~--~G~~ywl~~~~~~~~~~~~~~i~~fD~~~e~~~~i~~P~~~~~~~~ 251 (335)
.+|+. ++...... .+... ..+ .++.. +|.+|+... . ...|..+|. +..+..+..|....
T Consensus 165 ~~~~~-~g~~~~~~-~~~~~-~~~---~~i~~~~~g~l~v~~~-~-------~~~i~~~~~-~g~~~~~~~~~~~~---- 225 (299)
T 2z2n_A 165 GRITE-SGDITEFK-IPTPA-SGP---VGITKGNDDALWFVEI-I-------GNKIGRITT-SGEITEFKIPTPNA---- 225 (299)
T ss_dssp EEECT-TCCEEEEE-CSSTT-CCE---EEEEECTTSSEEEEET-T-------TTEEEEECT-TCCEEEEECSSTTC----
T ss_pred EEEcC-CCcEEEee-CCCCC-Ccc---eeEEECCCCCEEEEcc-C-------CceEEEECC-CCcEEEEECCCCCC----
Confidence 67776 55554431 11111 111 23333 577655443 2 337999999 66666665553221
Q ss_pred CeeEEEEe-CCeEEEEEecCCCCEEEEEEECCCCceeEEEEeccCC-ceeeeEEEeeCCEEEEEecCCeEEEEeCCCCce
Q 045559 252 KHTVFGLY-NDSLSFLVFDERESCFDIWTMKERYHWTKEFSTTPIL-AVDAPIGFWKNDTFFIRSNTEELLLYDPNSEEI 329 (335)
Q Consensus 252 ~~~~l~~~-~g~L~~~~~~~~~~~~~IW~l~~~~~W~~~~~i~~~~-~~~~~~~~~~~~~il~~~~~~~l~~yd~~~~~~ 329 (335)
.-..++.. +|.|++.... ...+.+|-.+ .. ...+.+ +.. ....-+.+ .+|.+++....+.+..||++++++
T Consensus 226 ~~~~i~~~~~g~l~v~~~~--~~~i~~~d~~--g~-~~~~~~-~~~~~~~~~i~~-~~g~l~v~~~~~~l~~~~~~~~~~ 298 (299)
T 2z2n_A 226 RPHAITAGAGIDLWFTEWG--ANKIGRLTSN--NI-IEEYPI-QIKSAEPHGICF-DGETIWFAMECDKIGKLTLIKDNM 298 (299)
T ss_dssp CEEEEEECSTTCEEEEETT--TTEEEEEETT--TE-EEEEEC-SSSSCCEEEEEE-CSSCEEEEETTTEEEEEEEC----
T ss_pred CceeEEECCCCCEEEeccC--CceEEEECCC--Cc-eEEEeC-CCCCCccceEEe-cCCCEEEEecCCcEEEEEcCcccC
Confidence 12234443 6777777644 4555555442 22 222333 211 12333444 678898887677899999998876
Q ss_pred e
Q 045559 330 I 330 (335)
Q Consensus 330 ~ 330 (335)
+
T Consensus 299 ~ 299 (299)
T 2z2n_A 299 E 299 (299)
T ss_dssp -
T ss_pred C
Confidence 4
No 35
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=93.50 E-value=2.9 Score=34.93 Aligned_cols=198 Identities=11% Similarity=0.083 Sum_probs=98.2
Q ss_pred cccceEEEee-cCceEEEEecchhhhhcCCCCcccCCcCCceeeeeEEeecCCCCCeEEEEEEEEecCccccccCCCceE
Q 045559 95 PFEGLFIMFI-GGDEIALYNHATRDLKFLPKLTLIDNLESIYTIMFGLGLDPKCNYYKLVYIVTYHDSELGKVLNDSRQV 173 (335)
Q Consensus 95 s~~GLl~~~~-~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~l~~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~~ 173 (335)
+.+|-+.+.. ....+.++||..+....++..... .+......++.+++..+.. +.... . ....+
T Consensus 38 ~~~g~l~v~~~~~~~i~~~d~~g~~~~~~~~~~~~---~~~~~~p~~i~~~~~~g~l--~v~~~--~--------~~~~i 102 (286)
T 1q7f_A 38 NAQNDIIVADTNNHRIQIFDKEGRFKFQFGECGKR---DSQLLYPNRVAVVRNSGDI--IVTER--S--------PTHQI 102 (286)
T ss_dssp CTTCCEEEEEGGGTEEEEECTTSCEEEEECCBSSS---TTCBSSEEEEEEETTTTEE--EEEEC--G--------GGCEE
T ss_pred CCCCCEEEEECCCCEEEEECCCCcEEEEecccCCC---cccccCceEEEEEcCCCeE--EEEcC--C--------CCCEE
Confidence 3456655554 356788999886655555432211 0011113566664333322 22110 0 12356
Q ss_pred EEEEcCCCcceecCcccccccccCCCceeee--ecceEEEEeecCCCCCccCceEEEEEECCccceeeecCCCccccCCC
Q 045559 174 FIYSFSDNSWRNFQGFEFGMYDLDEVLDCTY--HNGACHWLVPFGAFHPLCCHYVILSFDMSDEVFEEILGPNCLLEISP 251 (335)
Q Consensus 174 ~vyss~~~~W~~~~~~p~~~~~~~~~~~~v~--~~G~~ywl~~~~~~~~~~~~~~i~~fD~~~e~~~~i~~P~~~~~~~~ 251 (335)
.+|+.....-+....... ..+ .++. -+|.+|.... . ...|..||...+....+..+....
T Consensus 103 ~~~d~~g~~~~~~~~~~~---~~~---~~i~~~~~g~l~v~~~-~-------~~~i~~~~~~g~~~~~~~~~~~~~---- 164 (286)
T 1q7f_A 103 QIYNQYGQFVRKFGATIL---QHP---RGVTVDNKGRIIVVEC-K-------VMRVIIFDQNGNVLHKFGCSKHLE---- 164 (286)
T ss_dssp EEECTTSCEEEEECTTTC---SCE---EEEEECTTSCEEEEET-T-------TTEEEEECTTSCEEEEEECTTTCS----
T ss_pred EEECCCCcEEEEecCccC---CCc---eEEEEeCCCCEEEEEC-C-------CCEEEEEcCCCCEEEEeCCCCccC----
Confidence 777743332222211111 111 1232 3677665433 2 347888998766555553332211
Q ss_pred CeeEEEEe-CCeEEEEEecCCCCEEEEEEECCCCceeEEEEeccCC-ceeee--EEEeeCCEEEEEec-CC-eEEEEeCC
Q 045559 252 KHTVFGLY-NDSLSFLVFDERESCFDIWTMKERYHWTKEFSTTPIL-AVDAP--IGFWKNDTFFIRSN-TE-ELLLYDPN 325 (335)
Q Consensus 252 ~~~~l~~~-~g~L~~~~~~~~~~~~~IW~l~~~~~W~~~~~i~~~~-~~~~~--~~~~~~~~il~~~~-~~-~l~~yd~~ 325 (335)
....++.. +|+|++.... ...+.+|-.+. . ...++ ... .+..| +++..+|.+++... .+ .|..||++
T Consensus 165 ~p~~i~~~~~g~l~v~~~~--~~~i~~~~~~g--~--~~~~~-~~~g~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~~ 237 (286)
T 1q7f_A 165 FPNGVVVNDKQEIFISDNR--AHCVKVFNYEG--Q--YLRQI-GGEGITNYPIGVGINSNGEILIADNHNNFNLTIFTQD 237 (286)
T ss_dssp SEEEEEECSSSEEEEEEGG--GTEEEEEETTC--C--EEEEE-SCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEECTT
T ss_pred CcEEEEECCCCCEEEEECC--CCEEEEEcCCC--C--EEEEE-ccCCccCCCcEEEECCCCCEEEEeCCCCEEEEEECCC
Confidence 12234433 6778777654 46777776543 2 22334 222 12334 44556788887764 43 89999988
Q ss_pred CCceeec
Q 045559 326 SEEIIDF 332 (335)
Q Consensus 326 ~~~~~~v 332 (335)
++.+..+
T Consensus 238 g~~~~~~ 244 (286)
T 1q7f_A 238 GQLISAL 244 (286)
T ss_dssp SCEEEEE
T ss_pred CCEEEEE
Confidence 7766554
No 36
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=93.10 E-value=0.019 Score=54.69 Aligned_cols=27 Identities=33% Similarity=0.608 Sum_probs=25.5
Q ss_pred ChhhHhccCC-hhhhhhheeccccchhh
Q 045559 1 MVVEILSKFP-VKSLLRFRCVCKSWYEL 27 (335)
Q Consensus 1 ll~eIL~rLP-~k~l~r~r~VcK~W~~l 27 (335)
++.+||++|| .+++.+++.|||+|+.+
T Consensus 13 vL~~If~~L~~~~d~~~~s~vck~W~~~ 40 (594)
T 2p1m_B 13 VLEHVFSFIQLDKDRNSVSLVCKSWYEI 40 (594)
T ss_dssp HHHHHHHTCCCHHHHHHHHTSCHHHHHH
T ss_pred HHHHHHhhcCCchhHHHHHHHHHHHHHh
Confidence 4789999999 99999999999999988
No 37
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=92.80 E-value=4.1 Score=35.09 Aligned_cols=113 Identities=3% Similarity=-0.043 Sum_probs=64.5
Q ss_pred ecceEEEEeecCCCCCccCceEEEEEECCccceeee-cCCCccccCCCCeeEEEEe-CCe-EEEEEecCCCCEEEEEEEC
Q 045559 205 HNGACHWLVPFGAFHPLCCHYVILSFDMSDEVFEEI-LGPNCLLEISPKHTVFGLY-NDS-LSFLVFDERESCFDIWTMK 281 (335)
Q Consensus 205 ~~G~~ywl~~~~~~~~~~~~~~i~~fD~~~e~~~~i-~~P~~~~~~~~~~~~l~~~-~g~-L~~~~~~~~~~~~~IW~l~ 281 (335)
-+|.+|.....+. ...|..||+.+.....+ ..+.... ....++.. +|+ |++.... ...+.+|.++
T Consensus 49 pdg~l~~~~~~~~------~~~v~~~~~~~g~~~~~~~~~~~~~----~p~~~a~spdg~~l~~~~~~--~~~v~v~~~~ 116 (347)
T 3hfq_A 49 AKDCLYSVDKEDD------EGGIAAWQIDGQTAHKLNTVVAPGT----PPAYVAVDEARQLVYSANYH--KGTAEVMKIA 116 (347)
T ss_dssp TTCEEEEEEEETT------EEEEEEEEEETTEEEEEEEEEEESC----CCSEEEEETTTTEEEEEETT--TTEEEEEEEC
T ss_pred cCCeEEEEEecCC------CceEEEEEecCCcEEEeeeeecCCC----CCEEEEECCCCCEEEEEeCC--CCEEEEEEeC
Confidence 3788777665321 34788899877666555 2222111 11234433 566 5555543 5789999997
Q ss_pred CCCceeEEEEeccCCc----------eeeeEEEeeCCEEEEEe-cCCeEEEEeCC-CCcee
Q 045559 282 ERYHWTKEFSTTPILA----------VDAPIGFWKNDTFFIRS-NTEELLLYDPN-SEEII 330 (335)
Q Consensus 282 ~~~~W~~~~~i~~~~~----------~~~~~~~~~~~~il~~~-~~~~l~~yd~~-~~~~~ 330 (335)
..........+ .... ...-+.+.++|++++.. .++.+..||++ ++++.
T Consensus 117 ~~g~~~~~~~~-~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~~~~v~~~~~~~~g~~~ 176 (347)
T 3hfq_A 117 ADGALTLTDTV-QHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLGSDKVYVYNVSDAGQLS 176 (347)
T ss_dssp TTSCEEEEEEE-ECCCCCSSTTCSSCCEEEEEECTTSCEEEEETTTTEEEEEEECTTSCEE
T ss_pred CCCCeeeccee-ecCCCCCCccccCCCceEEEECCCCcEEEEeCCCCEEEEEEECCCCcEE
Confidence 53444444444 2211 12335667788855444 35679999988 55554
No 38
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=92.75 E-value=4.4 Score=34.98 Aligned_cols=195 Identities=12% Similarity=0.059 Sum_probs=102.0
Q ss_pred cceEEEeec-----CceEEEEecchhhhhc-CCCCcccCCcCCceeeeeEEeecCCCCCeEEEEEEEEecCccccccCCC
Q 045559 97 EGLFIMFIG-----GDEIALYNHATRDLKF-LPKLTLIDNLESIYTIMFGLGLDPKCNYYKLVYIVTYHDSELGKVLNDS 170 (335)
Q Consensus 97 ~GLl~~~~~-----~~~~~V~NP~T~~~~~-LP~~~~~~~~~~~~~~~~~l~~d~~~~~ykVv~~~~~~~~~~~~~~~~~ 170 (335)
+|+..+... ...+.++||.|++... ++..... .. .......+.++. .. ++.... ..
T Consensus 2 ~g~~v~neg~~g~~~~~l~~~d~~t~~~~~~i~~~~n~-~~--lg~~~~~i~~~~---~~-lyv~~~-----------~~ 63 (328)
T 3dsm_A 2 SGLFITNEGNFQYSNATLSYYDPATCEVENEVFYRANG-FK--LGDVAQSMVIRD---GI-GWIVVN-----------NS 63 (328)
T ss_dssp CEEEEEECCCTTSCCBEEEEEETTTTEEECSHHHHHHS-SC--CBSCEEEEEEET---TE-EEEEEG-----------GG
T ss_pred CeEEEEecCCCCCCCceEEEEECCCCEEhhhhHhhhcC-cc--cCccceEEEEEC---CE-EEEEEc-----------CC
Confidence 466665553 5789999999988653 2110000 00 111122334442 22 222211 12
Q ss_pred ceEEEEEcCCCcc-eecCcccccccccCCCceeee-ecceEEEEeecCCCCCccCceEEEEEECCcccee-eecCCCccc
Q 045559 171 RQVFIYSFSDNSW-RNFQGFEFGMYDLDEVLDCTY-HNGACHWLVPFGAFHPLCCHYVILSFDMSDEVFE-EILGPNCLL 247 (335)
Q Consensus 171 ~~~~vyss~~~~W-~~~~~~p~~~~~~~~~~~~v~-~~G~~ywl~~~~~~~~~~~~~~i~~fD~~~e~~~-~i~~P~~~~ 247 (335)
-.+.+++.++++- +.++.. ..+ ..-++ -+|.+|..... ...|..+|+++.+.. .++.+....
T Consensus 64 ~~v~viD~~t~~~~~~i~~~-----~~p--~~i~~~~~g~lyv~~~~--------~~~v~~iD~~t~~~~~~i~~g~~~~ 128 (328)
T 3dsm_A 64 HVIFAIDINTFKEVGRITGF-----TSP--RYIHFLSDEKAYVTQIW--------DYRIFIINPKTYEITGYIECPDMDM 128 (328)
T ss_dssp TEEEEEETTTCCEEEEEECC-----SSE--EEEEEEETTEEEEEEBS--------CSEEEEEETTTTEEEEEEECTTCCT
T ss_pred CEEEEEECcccEEEEEcCCC-----CCC--cEEEEeCCCeEEEEECC--------CCeEEEEECCCCeEEEEEEcCCccc
Confidence 4688888887654 222111 111 11223 57888776632 337999999887764 345544110
Q ss_pred cCCCCeeEEEEeCCeEEEEEecCCCCEEEEEEECCCCceeEEEEeccCCceeeeEEEeeCCEEEEEecC-----------
Q 045559 248 EISPKHTVFGLYNDSLSFLVFDERESCFDIWTMKERYHWTKEFSTTPILAVDAPIGFWKNDTFFIRSNT----------- 316 (335)
Q Consensus 248 ~~~~~~~~l~~~~g~L~~~~~~~~~~~~~IW~l~~~~~W~~~~~i~~~~~~~~~~~~~~~~~il~~~~~----------- 316 (335)
... ....++..+|+|++..... ...+.++-++. .... .++ +......-+.+.++|++++....
T Consensus 129 ~~~-~p~~i~~~~~~lyv~~~~~-~~~v~viD~~t-~~~~--~~i-~~g~~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~ 202 (328)
T 3dsm_A 129 ESG-STEQMVQYGKYVYVNCWSY-QNRILKIDTET-DKVV--DEL-TIGIQPTSLVMDKYNKMWTITDGGYEGSPYGYEA 202 (328)
T ss_dssp TTC-BCCCEEEETTEEEEEECTT-CCEEEEEETTT-TEEE--EEE-ECSSCBCCCEECTTSEEEEEBCCBCTTCSSCBCC
T ss_pred cCC-CcceEEEECCEEEEEcCCC-CCEEEEEECCC-CeEE--EEE-EcCCCccceEEcCCCCEEEEECCCccCCccccCC
Confidence 000 0112344788898886521 34555554443 4433 344 33322233455668898776643
Q ss_pred CeEEEEeCCCCcee
Q 045559 317 EELLLYDPNSEEII 330 (335)
Q Consensus 317 ~~l~~yd~~~~~~~ 330 (335)
..|..+|++++++.
T Consensus 203 ~~v~~id~~t~~v~ 216 (328)
T 3dsm_A 203 PSLYRIDAETFTVE 216 (328)
T ss_dssp CEEEEEETTTTEEE
T ss_pred ceEEEEECCCCeEE
Confidence 57999999998875
No 39
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=92.72 E-value=2.7 Score=36.51 Aligned_cols=106 Identities=13% Similarity=0.086 Sum_probs=59.8
Q ss_pred eEEEEEECCccceeee-cCCCccccCCCCeeEEEEe-CCe-EEEEEecCCCCEEEEEEECC-CCceeEEEEeccCCceee
Q 045559 225 YVILSFDMSDEVFEEI-LGPNCLLEISPKHTVFGLY-NDS-LSFLVFDERESCFDIWTMKE-RYHWTKEFSTTPILAVDA 300 (335)
Q Consensus 225 ~~i~~fD~~~e~~~~i-~~P~~~~~~~~~~~~l~~~-~g~-L~~~~~~~~~~~~~IW~l~~-~~~W~~~~~i~~~~~~~~ 300 (335)
..|..||+.+..+..+ ..+...... .....+... +|+ |++.... ....+.||.++. ...+.....+ +......
T Consensus 233 ~~v~v~~~~~g~~~~~~~~~~~~~~~-~~~~~i~~spdg~~l~v~~~~-~~~~i~v~~~~~~~g~~~~~~~~-~~g~~~~ 309 (361)
T 3scy_A 233 GTVIAFRYADGMLDEIQTVAADTVNA-QGSGDIHLSPDGKYLYASNRL-KADGVAIFKVDETNGTLTKVGYQ-LTGIHPR 309 (361)
T ss_dssp CEEEEEEEETTEEEEEEEEESCSSCC-CCEEEEEECTTSSEEEEEECS-SSCEEEEEEECTTTCCEEEEEEE-ECSSCCC
T ss_pred CeEEEEEecCCceEEeEEEecCCCCC-CCcccEEECCCCCEEEEECCC-CCCEEEEEEEcCCCCcEEEeeEe-cCCCCCc
Confidence 3677788776665444 222111100 012234433 666 5444432 147899999984 5667777666 4433344
Q ss_pred eEEEeeCCEEE-EEe-cCCeEEE--EeCCCCceeecc
Q 045559 301 PIGFWKNDTFF-IRS-NTEELLL--YDPNSEEIIDFQ 333 (335)
Q Consensus 301 ~~~~~~~~~il-~~~-~~~~l~~--yd~~~~~~~~v~ 333 (335)
-+.+.++|+.+ +.. .++.+.+ +|+++++++.+.
T Consensus 310 ~~~~spdg~~l~~~~~~~~~v~v~~~d~~~g~~~~~~ 346 (361)
T 3scy_A 310 NFIITPNGKYLLVACRDTNVIQIFERDQATGLLTDIK 346 (361)
T ss_dssp EEEECTTSCEEEEEETTTTEEEEEEECTTTCCEEECS
T ss_pred eEEECCCCCEEEEEECCCCCEEEEEEECCCCcEeecc
Confidence 56677888854 444 3455544 788899887764
No 40
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=92.67 E-value=4.9 Score=35.23 Aligned_cols=133 Identities=12% Similarity=0.065 Sum_probs=71.5
Q ss_pred ceEEEEEcCCC--cceecCccccc------ccccCCCceeeeecceEEEEeecCCCCCccCceEEEEEECCccceeee-c
Q 045559 171 RQVFIYSFSDN--SWRNFQGFEFG------MYDLDEVLDCTYHNGACHWLVPFGAFHPLCCHYVILSFDMSDEVFEEI-L 241 (335)
Q Consensus 171 ~~~~vyss~~~--~W~~~~~~p~~------~~~~~~~~~~v~~~G~~ywl~~~~~~~~~~~~~~i~~fD~~~e~~~~i-~ 241 (335)
-.+..++.+++ .|+.-...|.. +.... ..++..+|.+|..... ..+.++|.++.+.... +
T Consensus 198 g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~--~~p~~~~~~v~~~~~~---------g~l~~~d~~tG~~~w~~~ 266 (376)
T 3q7m_A 198 GRVSAVLMEQGQMIWQQRISQATGSTEIDRLSDVD--TTPVVVNGVVFALAYN---------GNLTALDLRSGQIMWKRE 266 (376)
T ss_dssp TEEEEEETTTCCEEEEEECCC-----------CCC--CCCEEETTEEEEECTT---------SCEEEEETTTCCEEEEEC
T ss_pred CEEEEEECCCCcEEEEEecccCCCCcccccccccC--CCcEEECCEEEEEecC---------cEEEEEECCCCcEEeecc
Confidence 35677776665 47654322211 10010 1367788888887643 3689999876543322 2
Q ss_pred CCCccccCCCCeeEEEEeCCeEEEEEecCCCCEEEEEEECC-CCceeEEEEeccCCceeeeEEEeeCCEEEEEecCCeEE
Q 045559 242 GPNCLLEISPKHTVFGLYNDSLSFLVFDERESCFDIWTMKE-RYHWTKEFSTTPILAVDAPIGFWKNDTFFIRSNTEELL 320 (335)
Q Consensus 242 ~P~~~~~~~~~~~~l~~~~g~L~~~~~~~~~~~~~IW~l~~-~~~W~~~~~i~~~~~~~~~~~~~~~~~il~~~~~~~l~ 320 (335)
.+. ...+...+|.|++.... ..+..+-.+. ...|.... . .......|+. .++.+++...+..|+
T Consensus 267 ~~~--------~~~~~~~~~~l~~~~~~---g~l~~~d~~tG~~~w~~~~-~-~~~~~~~~~~--~~~~l~v~~~~g~l~ 331 (376)
T 3q7m_A 267 LGS--------VNDFIVDGNRIYLVDQN---DRVMALTIDGGVTLWTQSD-L-LHRLLTSPVL--YNGNLVVGDSEGYLH 331 (376)
T ss_dssp CCC--------EEEEEEETTEEEEEETT---CCEEEEETTTCCEEEEECT-T-TTSCCCCCEE--ETTEEEEECTTSEEE
T ss_pred CCC--------CCCceEECCEEEEEcCC---CeEEEEECCCCcEEEeecc-c-CCCcccCCEE--ECCEEEEEeCCCeEE
Confidence 221 22355567777777643 2333333333 34464320 1 1122334443 267788877777899
Q ss_pred EEeCCCCce
Q 045559 321 LYDPNSEEI 329 (335)
Q Consensus 321 ~yd~~~~~~ 329 (335)
.+|+++++.
T Consensus 332 ~~d~~tG~~ 340 (376)
T 3q7m_A 332 WINVEDGRF 340 (376)
T ss_dssp EEETTTCCE
T ss_pred EEECCCCcE
Confidence 999988775
No 41
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=92.64 E-value=8.2 Score=37.74 Aligned_cols=66 Identities=8% Similarity=0.125 Sum_probs=43.0
Q ss_pred CCeEEEEEecCCCCEEEEEEECC-CCceeEEEEeccCCceeeeEEEeeC---CEEEEE-ecCCeEEEEeCCCC
Q 045559 260 NDSLSFLVFDERESCFDIWTMKE-RYHWTKEFSTTPILAVDAPIGFWKN---DTFFIR-SNTEELLLYDPNSE 327 (335)
Q Consensus 260 ~g~L~~~~~~~~~~~~~IW~l~~-~~~W~~~~~i~~~~~~~~~~~~~~~---~~il~~-~~~~~l~~yd~~~~ 327 (335)
+|.+.+.+.. .+.+.||-+.. ...+....++.....-..-+.+.++ +++++. ..++.+..||++++
T Consensus 169 d~~~l~sgs~--dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~~~~l~s~s~Dg~I~iwd~~~~ 239 (753)
T 3jro_A 169 ESRKFVTGGA--DNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNE 239 (753)
T ss_dssp GGCCEEEEET--TSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEESSSCEEEEEESSS
T ss_pred CCCEEEEEEC--CCeEEEEeccCCcccceeeeeecCCCCcEEEEEeccCCCCCCEEEEEecCCEEEEecCCCC
Confidence 3555555554 57799999987 5566666666323333444566667 776554 45778999998875
No 42
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=92.59 E-value=4.6 Score=34.80 Aligned_cols=66 Identities=8% Similarity=0.116 Sum_probs=43.4
Q ss_pred CCeEEEEEecCCCCEEEEEEECC-CCceeEEEEeccCCceeeeEEEeeC---CEEEE-EecCCeEEEEeCCCC
Q 045559 260 NDSLSFLVFDERESCFDIWTMKE-RYHWTKEFSTTPILAVDAPIGFWKN---DTFFI-RSNTEELLLYDPNSE 327 (335)
Q Consensus 260 ~g~L~~~~~~~~~~~~~IW~l~~-~~~W~~~~~i~~~~~~~~~~~~~~~---~~il~-~~~~~~l~~yd~~~~ 327 (335)
++.+.+.+.. ...+.||-+.. ...|.....+........-+.+.++ +++++ ...++.+..||++++
T Consensus 171 ~~~~l~~~~~--dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~dg~i~iwd~~~~ 241 (379)
T 3jrp_A 171 ESRKFVTGGA--DNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNE 241 (379)
T ss_dssp TTCEEEEEET--TSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESST
T ss_pred CCCEEEEEeC--CCeEEEEEecCCCcceeeEEEEecccCcEeEEEECCCCCCCCeEEEEeCCCEEEEEeCCCC
Confidence 4665555555 46899999986 5567776666323333444566667 77655 445778999998875
No 43
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=92.42 E-value=5.2 Score=34.94 Aligned_cols=193 Identities=9% Similarity=-0.041 Sum_probs=97.1
Q ss_pred eEEEeecCceEEEEecchhhhhcCCCCcccCCcCCceeeeeEEeecCCCCCeEEEEEEEEecCccccccCCCceEEEEEc
Q 045559 99 LFIMFIGGDEIALYNHATRDLKFLPKLTLIDNLESIYTIMFGLGLDPKCNYYKLVYIVTYHDSELGKVLNDSRQVFIYSF 178 (335)
Q Consensus 99 Ll~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~l~~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~~~vyss 178 (335)
++........+.|||..+++....-..... ......+.+.|..+.+- +... ..-.+.+++.
T Consensus 88 ~l~s~~~dg~i~iwd~~~~~~~~~~~~~~h------~~~v~~~~~~~~~~~~l-~s~~------------~d~~i~iwd~ 148 (383)
T 3ei3_B 88 TVAVGSKGGDIILWDYDVQNKTSFIQGMGP------GDAITGMKFNQFNTNQL-FVSS------------IRGATTLRDF 148 (383)
T ss_dssp EEEEEEBTSCEEEEETTSTTCEEEECCCST------TCBEEEEEEETTEEEEE-EEEE------------TTTEEEEEET
T ss_pred EEEEEcCCCeEEEEeCCCcccceeeecCCc------CCceeEEEeCCCCCCEE-EEEe------------CCCEEEEEEC
Confidence 555555577899999998776544322111 01144566665322222 2221 1335788888
Q ss_pred CCCcceecCcccccccccCCCceeeeecceEEEEeecCCCCCccCceEEEEEECCccceeeecCCCccccCCCCeeEEEE
Q 045559 179 SDNSWRNFQGFEFGMYDLDEVLDCTYHNGACHWLVPFGAFHPLCCHYVILSFDMSDEVFEEILGPNCLLEISPKHTVFGL 258 (335)
Q Consensus 179 ~~~~W~~~~~~p~~~~~~~~~~~~v~~~G~~ywl~~~~~~~~~~~~~~i~~fD~~~e~~~~i~~P~~~~~~~~~~~~l~~ 258 (335)
+++..+............. .....-+|.....+.. ...|..+|+..+....+..... .-..+..
T Consensus 149 ~~~~~~~~~~~~~~~~~v~--~~~~~~~~~~l~~~~~--------d~~i~i~d~~~~~~~~~~~h~~------~v~~~~~ 212 (383)
T 3ei3_B 149 SGSVIQVFAKTDSWDYWYC--CVDVSVSRQMLATGDS--------TGRLLLLGLDGHEIFKEKLHKA------KVTHAEF 212 (383)
T ss_dssp TSCEEEEEECCCCSSCCEE--EEEEETTTTEEEEEET--------TSEEEEEETTSCEEEEEECSSS------CEEEEEE
T ss_pred CCCceEEEeccCCCCCCeE--EEEECCCCCEEEEECC--------CCCEEEEECCCCEEEEeccCCC------cEEEEEE
Confidence 7655544321110000000 0112223443333332 3468888886555444432221 1122333
Q ss_pred e-CCe-EEEEEecCCCCEEEEEEECC-CCceeEEEEeccCCceeeeEEEee-CCEEEE-EecCCeEEEEeCCCCce
Q 045559 259 Y-NDS-LSFLVFDERESCFDIWTMKE-RYHWTKEFSTTPILAVDAPIGFWK-NDTFFI-RSNTEELLLYDPNSEEI 329 (335)
Q Consensus 259 ~-~g~-L~~~~~~~~~~~~~IW~l~~-~~~W~~~~~i~~~~~~~~~~~~~~-~~~il~-~~~~~~l~~yd~~~~~~ 329 (335)
. +|. +.+.+.. ...+.||-+.. ...-.....+ .......-+.+.+ +++.++ ...++.+..||+++.+.
T Consensus 213 ~~~~~~~l~s~~~--d~~i~iwd~~~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~~l~~~~~d~~i~iwd~~~~~~ 285 (383)
T 3ei3_B 213 NPRCDWLMATSSV--DATVKLWDLRNIKDKNSYIAEM-PHEKPVNAAYFNPTDSTKLLTTDQRNEIRVYSSYDWSK 285 (383)
T ss_dssp CSSCTTEEEEEET--TSEEEEEEGGGCCSTTCEEEEE-ECSSCEEEEEECTTTSCEEEEEESSSEEEEEETTBTTS
T ss_pred CCCCCCEEEEEeC--CCEEEEEeCCCCCcccceEEEe-cCCCceEEEEEcCCCCCEEEEEcCCCcEEEEECCCCcc
Confidence 3 444 5555544 57899999886 2222334444 3444445566667 777554 45577899999987543
No 44
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=92.38 E-value=4.4 Score=34.06 Aligned_cols=199 Identities=9% Similarity=0.037 Sum_probs=90.3
Q ss_pred eEEEeecCceEEEEecchhhhhcCCCCcccCCcCCceeeeeEEeecCCCCCeEEEEEEEEecCccccccCCCceEEEEEc
Q 045559 99 LFIMFIGGDEIALYNHATRDLKFLPKLTLIDNLESIYTIMFGLGLDPKCNYYKLVYIVTYHDSELGKVLNDSRQVFIYSF 178 (335)
Q Consensus 99 Ll~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~l~~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~~~vyss 178 (335)
|+........++++||.++ ...+...... ..++.+++... ++.. . .....+.+|+.
T Consensus 42 l~~~~~~~~~i~~~~~~~~-~~~~~~~~~~---------~~~l~~~~dg~---l~v~-~----------~~~~~i~~~d~ 97 (296)
T 3e5z_A 42 VIFSDVRQNRTWAWSDDGQ-LSPEMHPSHH---------QNGHCLNKQGH---LIAC-S----------HGLRRLERQRE 97 (296)
T ss_dssp EEEEEGGGTEEEEEETTSC-EEEEESSCSS---------EEEEEECTTCC---EEEE-E----------TTTTEEEEECS
T ss_pred EEEEeCCCCEEEEEECCCC-eEEEECCCCC---------cceeeECCCCc---EEEE-e----------cCCCeEEEEcC
Confidence 4444444678999999988 5554432222 45777777442 2222 1 11346788888
Q ss_pred CCCcceecCccccc-ccccCCCceeeeecceEEEEeec-CC--------CCCccCceEEEEEECCccceeeecCCCcccc
Q 045559 179 SDNSWRNFQGFEFG-MYDLDEVLDCTYHNGACHWLVPF-GA--------FHPLCCHYVILSFDMSDEVFEEILGPNCLLE 248 (335)
Q Consensus 179 ~~~~W~~~~~~p~~-~~~~~~~~~~v~~~G~~ywl~~~-~~--------~~~~~~~~~i~~fD~~~e~~~~i~~P~~~~~ 248 (335)
.++..+........ ....+ ..-.+--+|.+|+.... +. .........|..+|.. .+...+.....
T Consensus 98 ~~g~~~~~~~~~~~~~~~~~-~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~~~--- 172 (296)
T 3e5z_A 98 PGGEWESIADSFEGKKLNSP-NDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GTLSAPIRDRV--- 172 (296)
T ss_dssp TTCCEEEEECEETTEECCCC-CCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SCEEEEECCCS---
T ss_pred CCCcEEEEeeccCCCCCCCC-CCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-CCEEEeecCCC---
Confidence 77776554221111 11111 01133346776664210 00 0000002378889887 44444321110
Q ss_pred CCCCeeEEEEe-CCeEEEEEecCCCCEEEEEEECCCCce-eEEEEeccCCceeeeEEEeeCCEEEEEecCCeEEEEeCCC
Q 045559 249 ISPKHTVFGLY-NDSLSFLVFDERESCFDIWTMKERYHW-TKEFSTTPILAVDAPIGFWKNDTFFIRSNTEELLLYDPNS 326 (335)
Q Consensus 249 ~~~~~~~l~~~-~g~L~~~~~~~~~~~~~IW~l~~~~~W-~~~~~i~~~~~~~~~~~~~~~~~il~~~~~~~l~~yd~~~ 326 (335)
....++.. +|++.+.... ...+.+|-++..... .....+........-+++..+|.+++.. ...|..||+++
T Consensus 173 ---~~~gi~~s~dg~~lv~~~~--~~~i~~~~~~~~g~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~-~~~v~~~~~~g 246 (296)
T 3e5z_A 173 ---KPNGLAFLPSGNLLVSDTG--DNATHRYCLNARGETEYQGVHFTVEPGKTDGLRVDAGGLIWASA-GDGVHVLTPDG 246 (296)
T ss_dssp ---SEEEEEECTTSCEEEEETT--TTEEEEEEECSSSCEEEEEEEECCSSSCCCSEEEBTTSCEEEEE-TTEEEEECTTS
T ss_pred ---CCccEEECCCCCEEEEeCC--CCeEEEEEECCCCcCcCCCeEeeCCCCCCCeEEECCCCCEEEEc-CCeEEEECCCC
Confidence 11123332 4554333322 456666666532333 1111111111112223444556666555 45677777765
Q ss_pred Cceeec
Q 045559 327 EEIIDF 332 (335)
Q Consensus 327 ~~~~~v 332 (335)
+.++.+
T Consensus 247 ~~~~~~ 252 (296)
T 3e5z_A 247 DELGRV 252 (296)
T ss_dssp CEEEEE
T ss_pred CEEEEE
Confidence 555444
No 45
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=92.18 E-value=5.2 Score=34.41 Aligned_cols=72 Identities=14% Similarity=0.120 Sum_probs=46.9
Q ss_pred eCCe-EEEEEecCCCCEEEEEEECCCCceeEEEEeccC-CceeeeEEEeeCCEE-EEEec-CCeEEEE--eCCCCceeec
Q 045559 259 YNDS-LSFLVFDERESCFDIWTMKERYHWTKEFSTTPI-LAVDAPIGFWKNDTF-FIRSN-TEELLLY--DPNSEEIIDF 332 (335)
Q Consensus 259 ~~g~-L~~~~~~~~~~~~~IW~l~~~~~W~~~~~i~~~-~~~~~~~~~~~~~~i-l~~~~-~~~l~~y--d~~~~~~~~v 332 (335)
-+|+ |++.... .+.+.+|.++....+.....+ +. .....-+++.++|+. ++... .+.+..| |+++++++++
T Consensus 249 pdG~~l~v~~~~--~~~v~v~~~~~~g~~~~~~~~-~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~d~~tg~l~~~ 325 (347)
T 3hfq_A 249 HDGHFLYVSNRG--YNTLAVFAVTADGHLTLIQQI-STEGDFPRDFDLDPTEAFVVVVNQNTDNATLYARDLTSGKLSLL 325 (347)
T ss_dssp TTSCEEEEEEET--TTEEEEEEECGGGCEEEEEEE-ECSSSCCCEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEE
T ss_pred CCCCEEEEEeCC--CCEEEEEEECCCCcEEEeEEE-ecCCCCcCeEEECCCCCEEEEEEcCCCcEEEEEEeCCCCeEEec
Confidence 3676 6666654 578999999853455666666 43 223455667788884 44443 4667777 8888888865
Q ss_pred c
Q 045559 333 Q 333 (335)
Q Consensus 333 ~ 333 (335)
+
T Consensus 326 ~ 326 (347)
T 3hfq_A 326 Q 326 (347)
T ss_dssp E
T ss_pred c
Confidence 4
No 46
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=92.17 E-value=0.041 Score=52.37 Aligned_cols=27 Identities=15% Similarity=0.523 Sum_probs=25.4
Q ss_pred ChhhHhccC-Chhhhhhheeccccchhh
Q 045559 1 MVVEILSKF-PVKSLLRFRCVCKSWYEL 27 (335)
Q Consensus 1 ll~eIL~rL-P~k~l~r~r~VcK~W~~l 27 (335)
++.+||++| |.+++.+++.|||+|+.+
T Consensus 20 il~~I~~~L~~~~d~~~~s~vck~W~~~ 47 (592)
T 3ogk_B 20 VIEQVMTYITDPKDRDSASLVCRRWFKI 47 (592)
T ss_dssp THHHHHTTCCCHHHHHHHTTSCHHHHHH
T ss_pred HHHHHHHhcCCHHHHHHHHHHhHHHHHh
Confidence 578999999 899999999999999987
No 47
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=91.45 E-value=7.2 Score=34.57 Aligned_cols=196 Identities=10% Similarity=0.019 Sum_probs=97.5
Q ss_pred cccceEEEee-cCceEEEEecchhhhhc-CCCCcccCCcCCceeeeeEEeecCCCCCeEEEEEEEEecCccccccCCCce
Q 045559 95 PFEGLFIMFI-GGDEIALYNHATRDLKF-LPKLTLIDNLESIYTIMFGLGLDPKCNYYKLVYIVTYHDSELGKVLNDSRQ 172 (335)
Q Consensus 95 s~~GLl~~~~-~~~~~~V~NP~T~~~~~-LP~~~~~~~~~~~~~~~~~l~~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~ 172 (335)
+.+|-+++.. ....+.+||+.+++... ++..... ...+.+++..+ +-++.. ...-.
T Consensus 178 ~~~~~~~~s~~~d~~v~~~d~~~~~~~~~~~~~~~~---------~~~~~~~~~~~-~l~~~~------------~~~~~ 235 (433)
T 3bws_A 178 PEHNELWVSQMQANAVHVFDLKTLAYKATVDLTGKW---------SKILLYDPIRD-LVYCSN------------WISED 235 (433)
T ss_dssp GGGTEEEEEEGGGTEEEEEETTTCCEEEEEECSSSS---------EEEEEEETTTT-EEEEEE------------TTTTE
T ss_pred cCCCEEEEEECCCCEEEEEECCCceEEEEEcCCCCC---------eeEEEEcCCCC-EEEEEe------------cCCCc
Confidence 4466665555 35788999988865432 2211111 34566666433 222221 11336
Q ss_pred EEEEEcCCCcceecCcccccccccCCCceeeeecceEEEEeecCCCCCccCceEEEEEECCccceeee-cCCCccccCCC
Q 045559 173 VFIYSFSDNSWRNFQGFEFGMYDLDEVLDCTYHNGACHWLVPFGAFHPLCCHYVILSFDMSDEVFEEI-LGPNCLLEISP 251 (335)
Q Consensus 173 ~~vyss~~~~W~~~~~~p~~~~~~~~~~~~v~~~G~~ywl~~~~~~~~~~~~~~i~~fD~~~e~~~~i-~~P~~~~~~~~ 251 (335)
+.+|+.+++.....-....... . ....-+|...+.+..+..........|..+|+.+.+.... ..+..
T Consensus 236 i~~~d~~~~~~~~~~~~~~~~~-~----~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~~~~~~~~------ 304 (433)
T 3bws_A 236 ISVIDRKTKLEIRKTDKIGLPR-G----LLLSKDGKELYIAQFSASNQESGGGRLGIYSMDKEKLIDTIGPPGN------ 304 (433)
T ss_dssp EEEEETTTTEEEEECCCCSEEE-E----EEECTTSSEEEEEEEESCTTCSCCEEEEEEETTTTEEEEEEEEEEC------
T ss_pred EEEEECCCCcEEEEecCCCCce-E----EEEcCCCCEEEEEECCCCccccCCCeEEEEECCCCcEEeeccCCCC------
Confidence 8888888765432211100000 0 1122245444444321100000034788999887654333 22211
Q ss_pred CeeEEEE-eCCe-EEEEEecCCCCEEEEEEECCCCceeEEEEeccCCceeeeEEEeeCCEEE-EEecC------------
Q 045559 252 KHTVFGL-YNDS-LSFLVFDERESCFDIWTMKERYHWTKEFSTTPILAVDAPIGFWKNDTFF-IRSNT------------ 316 (335)
Q Consensus 252 ~~~~l~~-~~g~-L~~~~~~~~~~~~~IW~l~~~~~W~~~~~i~~~~~~~~~~~~~~~~~il-~~~~~------------ 316 (335)
...+.. -+|+ |++.... ...+.+|-++. . .....+ +...-..-+++.++|+.+ +....
T Consensus 305 -~~~~~~~~~g~~l~~~~~~--~~~v~v~d~~~-~--~~~~~~-~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~g 377 (433)
T 3bws_A 305 -KRHIVSGNTENKIYVSDMC--CSKIEVYDLKE-K--KVQKSI-PVFDKPNTIALSPDGKYLYVSCRGPNHPTEGYLKKG 377 (433)
T ss_dssp -EEEEEECSSTTEEEEEETT--TTEEEEEETTT-T--EEEEEE-ECSSSEEEEEECTTSSEEEEEECCCCCTTTCTTSCC
T ss_pred -cceEEECCCCCEEEEEecC--CCEEEEEECCC-C--cEEEEe-cCCCCCCeEEEcCCCCEEEEEecCCCcccccccccc
Confidence 112222 2454 5555544 57899998875 3 334455 333334456666777744 44332
Q ss_pred ---CeEEEEeCCCCcee
Q 045559 317 ---EELLLYDPNSEEII 330 (335)
Q Consensus 317 ---~~l~~yd~~~~~~~ 330 (335)
+.+..||+++++..
T Consensus 378 ~~dg~v~~~d~~~~~~~ 394 (433)
T 3bws_A 378 LVLGKVYVIDTTTDTVK 394 (433)
T ss_dssp SSCCEEEEEETTTTEEE
T ss_pred ccceEEEEEECCCCcEE
Confidence 38999999887754
No 48
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=91.44 E-value=5.1 Score=32.87 Aligned_cols=188 Identities=7% Similarity=0.011 Sum_probs=96.0
Q ss_pred cccceEEEeecCceEEEEecchhhhhcCCCCcccCCcCCceeeeeEEeecCCCCCeEEEEEEEEecCccccccCCCceEE
Q 045559 95 PFEGLFIMFIGGDEIALYNHATRDLKFLPKLTLIDNLESIYTIMFGLGLDPKCNYYKLVYIVTYHDSELGKVLNDSRQVF 174 (335)
Q Consensus 95 s~~GLl~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~l~~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~~~ 174 (335)
+.+|-+.+......++++||.++....++..... ...++.+|+.. . ++ +.. ...-.+.
T Consensus 75 ~~~g~l~v~~~~~~i~~~d~~~~~~~~~~~~~~~--------~p~~i~~~~~g-~--l~-v~~----------~~~~~i~ 132 (270)
T 1rwi_B 75 DGAGTVYVTDFNNRVVTLAAGSNNQTVLPFDGLN--------YPEGLAVDTQG-A--VY-VAD----------RGNNRVV 132 (270)
T ss_dssp CTTCCEEEEETTTEEEEECTTCSCCEECCCCSCS--------SEEEEEECTTC-C--EE-EEE----------GGGTEEE
T ss_pred CCCCCEEEEcCCCEEEEEeCCCceEeeeecCCcC--------CCcceEECCCC-C--EE-EEE----------CCCCEEE
Confidence 3456655555456889999988776655432211 13577777743 2 22 221 0123466
Q ss_pred EEEcCCCcceecCcccccccccCCCceeeee--cceEEEEeecCCCCCccCceEEEEEECCccceeeecCCCccccCCCC
Q 045559 175 IYSFSDNSWRNFQGFEFGMYDLDEVLDCTYH--NGACHWLVPFGAFHPLCCHYVILSFDMSDEVFEEILGPNCLLEISPK 252 (335)
Q Consensus 175 vyss~~~~W~~~~~~p~~~~~~~~~~~~v~~--~G~~ywl~~~~~~~~~~~~~~i~~fD~~~e~~~~i~~P~~~~~~~~~ 252 (335)
+|+.++......... ... .+ .++.+ +|.+|+.... ...|..||.............. . .
T Consensus 133 ~~~~~~~~~~~~~~~--~~~-~p---~~i~~~~~g~l~v~~~~--------~~~i~~~~~~~~~~~~~~~~~~-~----~ 193 (270)
T 1rwi_B 133 KLAAGSKTQTVLPFT--GLN-DP---DGVAVDNSGNVYVTDTD--------NNRVVKLEAESNNQVVLPFTDI-T----A 193 (270)
T ss_dssp EECTTCCSCEECCCC--SCC-SC---CCEEECTTCCEEEEEGG--------GTEEEEECTTTCCEEECCCSSC-C----S
T ss_pred EEECCCceeEeeccc--cCC-Cc---eeEEEeCCCCEEEEECC--------CCEEEEEecCCCceEeecccCC-C----C
Confidence 665544433222110 111 11 13333 5786665442 3479999988765443322111 1 2
Q ss_pred eeEEEEe-CCeEEEEEecCCCCEEEEEEECCCCceeEEEEeccCCceeee--EEEeeCCEEEEEe-cCCeEEEEeCCCCc
Q 045559 253 HTVFGLY-NDSLSFLVFDERESCFDIWTMKERYHWTKEFSTTPILAVDAP--IGFWKNDTFFIRS-NTEELLLYDPNSEE 328 (335)
Q Consensus 253 ~~~l~~~-~g~L~~~~~~~~~~~~~IW~l~~~~~W~~~~~i~~~~~~~~~--~~~~~~~~il~~~-~~~~l~~yd~~~~~ 328 (335)
...++.. +|.|++.... ...+.+|-.+.... ..+ +...+..| +++.++|++++.. .+++|..|++..++
T Consensus 194 p~~i~~d~~g~l~v~~~~--~~~v~~~~~~~~~~----~~~-~~~~~~~p~~i~~~~~g~l~v~~~~~~~v~~~~~~~~~ 266 (270)
T 1rwi_B 194 PWGIAVDEAGTVYVTEHN--TNQVVKLLAGSTTS----TVL-PFTGLNTPLAVAVDSDRTVYVADRGNDRVVKLTSLEHH 266 (270)
T ss_dssp EEEEEECTTCCEEEEETT--TSCEEEECTTCSCC----EEC-CCCSCSCEEEEEECTTCCEEEEEGGGTEEEEECCCGGG
T ss_pred ceEEEECCCCCEEEEECC--CCcEEEEcCCCCcc----eee-ccCCCCCceeEEECCCCCEEEEECCCCEEEEEcCCCcc
Confidence 2234443 5677777654 34555554433111 113 23333334 4445578877765 46789999998766
Q ss_pred ee
Q 045559 329 II 330 (335)
Q Consensus 329 ~~ 330 (335)
-+
T Consensus 267 ~~ 268 (270)
T 1rwi_B 267 HH 268 (270)
T ss_dssp SC
T ss_pred cc
Confidence 44
No 49
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=91.31 E-value=5.3 Score=32.80 Aligned_cols=198 Identities=10% Similarity=-0.006 Sum_probs=96.8
Q ss_pred cccceEEEeecCceEEEEecch-hhhhcCCCCcccCCcCCceeeeeEEeecCCCCCeEEEEEEEEecCccccccCCCceE
Q 045559 95 PFEGLFIMFIGGDEIALYNHAT-RDLKFLPKLTLIDNLESIYTIMFGLGLDPKCNYYKLVYIVTYHDSELGKVLNDSRQV 173 (335)
Q Consensus 95 s~~GLl~~~~~~~~~~V~NP~T-~~~~~LP~~~~~~~~~~~~~~~~~l~~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~~ 173 (335)
+-+|-.++......++++|..+ ++...+...... .....+.+.|.. .+ ++.... . ......+
T Consensus 50 spdg~~l~~~~~~~i~~~d~~~~~~~~~~~~~~~~-------~~~~~~~~spdg-~~-l~~~~~---~-----~~~~~~l 112 (297)
T 2ojh_A 50 SPDGKYLLLNSEGLLYRLSLAGDPSPEKVDTGFAT-------ICNNDHGISPDG-AL-YAISDK---V-----EFGKSAI 112 (297)
T ss_dssp CTTSSEEEEEETTEEEEEESSSCCSCEECCCTTCC-------CBCSCCEECTTS-SE-EEEEEC---T-----TTSSCEE
T ss_pred CCCCCEEEEEcCCeEEEEeCCCCCCceEecccccc-------ccccceEECCCC-CE-EEEEEe---C-----CCCcceE
Confidence 3455444444477899999999 877766543321 002334455533 32 222211 1 1134567
Q ss_pred EEEEcCCCcceecCcccccccccCCCceeeeecce-EEEEeecCCCCCccCceEEEEEECCccceeeecCCCccccCCCC
Q 045559 174 FIYSFSDNSWRNFQGFEFGMYDLDEVLDCTYHNGA-CHWLVPFGAFHPLCCHYVILSFDMSDEVFEEILGPNCLLEISPK 252 (335)
Q Consensus 174 ~vyss~~~~W~~~~~~p~~~~~~~~~~~~v~~~G~-~ywl~~~~~~~~~~~~~~i~~fD~~~e~~~~i~~P~~~~~~~~~ 252 (335)
.+++..++.-+.+..... .. . ....-+|. +++...... ...|..+|..+.....+..... .
T Consensus 113 ~~~~~~~~~~~~~~~~~~-~~-~----~~~spdg~~l~~~~~~~~------~~~l~~~~~~~~~~~~~~~~~~------~ 174 (297)
T 2ojh_A 113 YLLPSTGGTPRLMTKNLP-SY-W----HGWSPDGKSFTYCGIRDQ------VFDIYSMDIDSGVETRLTHGEG------R 174 (297)
T ss_dssp EEEETTCCCCEECCSSSS-EE-E----EEECTTSSEEEEEEEETT------EEEEEEEETTTCCEEECCCSSS------C
T ss_pred EEEECCCCceEEeecCCC-cc-c----eEECCCCCEEEEEECCCC------ceEEEEEECCCCcceEcccCCC------c
Confidence 777777665444432111 00 0 01222444 333333221 4467777777666554422111 1
Q ss_pred eeEEEE-eCCe-EEEEEecCCCCEEEEEEECC-CCceeEEEEeccCCceeeeEEEeeCCEE-EEEecC-----------C
Q 045559 253 HTVFGL-YNDS-LSFLVFDERESCFDIWTMKE-RYHWTKEFSTTPILAVDAPIGFWKNDTF-FIRSNT-----------E 317 (335)
Q Consensus 253 ~~~l~~-~~g~-L~~~~~~~~~~~~~IW~l~~-~~~W~~~~~i~~~~~~~~~~~~~~~~~i-l~~~~~-----------~ 317 (335)
...+.. -+|+ |++.... ...+.||.++. ... ...+.........+.+.++|+. ++...+ .
T Consensus 175 ~~~~~~s~dg~~l~~~~~~--~~~~~i~~~~~~~~~---~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~ 249 (297)
T 2ojh_A 175 NDGPDYSPDGRWIYFNSSR--TGQMQIWRVRVDGSS---VERITDSAYGDWFPHPSPSGDKVVFVSYDADVFDHPRDLDV 249 (297)
T ss_dssp EEEEEECTTSSEEEEEECT--TSSCEEEEEETTSSC---EEECCCCSEEEEEEEECTTSSEEEEEEEETTCCSCCSSEEE
T ss_pred cccceECCCCCEEEEEecC--CCCccEEEECCCCCC---cEEEecCCcccCCeEECCCCCEEEEEEcCCCCCcccccCce
Confidence 122332 3565 4444433 45688999874 222 2223112222334555677774 444332 4
Q ss_pred eEEEEeCCCCceeec
Q 045559 318 ELLLYDPNSEEIIDF 332 (335)
Q Consensus 318 ~l~~yd~~~~~~~~v 332 (335)
.|+.||+++++.+.+
T Consensus 250 ~l~~~d~~~~~~~~~ 264 (297)
T 2ojh_A 250 RVQLMDMDGGNVETL 264 (297)
T ss_dssp EEEEEETTSCSCEEE
T ss_pred EEEEEecCCCCceee
Confidence 599999998876543
No 50
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=91.26 E-value=7.7 Score=34.54 Aligned_cols=194 Identities=7% Similarity=0.007 Sum_probs=93.3
Q ss_pred cccceEEEeecCceEEEEecchhhhhcCCCCcccCCcCCceeeeeEEeecCCCCCeEEEEEEEEecCccccccCCCceEE
Q 045559 95 PFEGLFIMFIGGDEIALYNHATRDLKFLPKLTLIDNLESIYTIMFGLGLDPKCNYYKLVYIVTYHDSELGKVLNDSRQVF 174 (335)
Q Consensus 95 s~~GLl~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~l~~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~~~ 174 (335)
|.+++|.+.. ...++|||..|++...+-..... ......+.+.|. +.|-++.- ..-.+.
T Consensus 114 S~~n~lAvgl-d~tV~lWd~~tg~~~~~~~~~~~------~~~V~sv~fspd-g~~lasgs-------------~Dg~v~ 172 (420)
T 4gga_A 114 SSGNVLAVAL-DNSVYLWSASSGDILQLLQMEQP------GEYISSVAWIKE-GNYLAVGT-------------SSAEVQ 172 (420)
T ss_dssp CTTSEEEEEE-TTEEEEEETTTCCEEEEEECCST------TCCEEEEEECTT-SSEEEEEE-------------TTSCEE
T ss_pred CCCCEEEEEe-CCEEEEEECCCCCEEEEEEecCC------CCcEEEEEECCC-CCEEEEEE-------------CCCeEE
Confidence 6678887776 78999999999987765433221 011456667664 34433321 133578
Q ss_pred EEEcCCCcceecCcccccccccCCCceeeeecceEEEEeecCCCCCccCceEEEEEECCccceeeecCCCccccCCCCee
Q 045559 175 IYSFSDNSWRNFQGFEFGMYDLDEVLDCTYHNGACHWLVPFGAFHPLCCHYVILSFDMSDEVFEEILGPNCLLEISPKHT 254 (335)
Q Consensus 175 vyss~~~~W~~~~~~p~~~~~~~~~~~~v~~~G~~ywl~~~~~~~~~~~~~~i~~fD~~~e~~~~i~~P~~~~~~~~~~~ 254 (335)
+++.+++.-... .. .+.....++..+|.+-..+.. ...+..+|..........+..... ...
T Consensus 173 iWd~~~~~~~~~--~~----~h~~~v~~~s~~~~~l~sgs~--------d~~i~~~d~~~~~~~~~~~~~h~~----~~~ 234 (420)
T 4gga_A 173 LWDVQQQKRLRN--MT----SHSARVGSLSWNSYILSSGSR--------SGHIHHHDVRVAEHHVATLSGHSQ----EVC 234 (420)
T ss_dssp EEETTTTEEEEE--EC----CCSSCEEEEEEETTEEEEEET--------TSEEEEEETTSSSCEEEEEECCSS----CEE
T ss_pred EEEcCCCcEEEE--Ee----CCCCceEEEeeCCCEEEEEeC--------CCceeEeeecccceeeEEeccccc----cee
Confidence 888877632111 00 000001244455544333322 235666776554333222221111 111
Q ss_pred EEE-EeCCeEEEEEecCCCCEEEEEEECC-CCceeEEEEeccCCceeeeEEEeeC-CEEEEE-e--cCCeEEEEeCCCCc
Q 045559 255 VFG-LYNDSLSFLVFDERESCFDIWTMKE-RYHWTKEFSTTPILAVDAPIGFWKN-DTFFIR-S--NTEELLLYDPNSEE 328 (335)
Q Consensus 255 ~l~-~~~g~L~~~~~~~~~~~~~IW~l~~-~~~W~~~~~i~~~~~~~~~~~~~~~-~~il~~-~--~~~~l~~yd~~~~~ 328 (335)
.+. .-+|...+.... .+.+.||-... ...+...............+.+.++ +.++.. . .++.+..||.++++
T Consensus 235 ~~~~~~~g~~l~s~~~--D~~v~i~~~~~~~~~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~~ 312 (420)
T 4gga_A 235 GLRWAPDGRHLASGGN--DNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGA 312 (420)
T ss_dssp EEEECTTSSEEEEEET--TSCEEEEESSCCSSCSCCSEEECCCSSCEEEEEECTTCTTEEEEEECTTTCEEEEEETTTTE
T ss_pred eeeecCCCCeeeeeec--cccceEEeeccccccceeeeeecccCCceeeeeeCCCcccEEEEEeecCCCEEEEEeCCccc
Confidence 222 224554444443 46788898876 2222222222122222233333433 334433 2 25678888887765
Q ss_pred e
Q 045559 329 I 329 (335)
Q Consensus 329 ~ 329 (335)
.
T Consensus 313 ~ 313 (420)
T 4gga_A 313 C 313 (420)
T ss_dssp E
T ss_pred c
Confidence 4
No 51
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=91.08 E-value=6.4 Score=33.33 Aligned_cols=70 Identities=10% Similarity=0.074 Sum_probs=44.6
Q ss_pred CCe-EEEEEecCCCCEEEEEEECC-CCceeEEEEeccCCceeeeEEEeeCCEEE-EEe-cCCeEEEE--eCCCCceeec
Q 045559 260 NDS-LSFLVFDERESCFDIWTMKE-RYHWTKEFSTTPILAVDAPIGFWKNDTFF-IRS-NTEELLLY--DPNSEEIIDF 332 (335)
Q Consensus 260 ~g~-L~~~~~~~~~~~~~IW~l~~-~~~W~~~~~i~~~~~~~~~~~~~~~~~il-~~~-~~~~l~~y--d~~~~~~~~v 332 (335)
+|+ |++.... ...+.+|-++. ...+.....+ +......-+++.++|+.+ +.. .++.+.+| |+++++++.+
T Consensus 241 dg~~l~v~~~~--~~~i~v~d~~~~~~~~~~~~~~-~~~~~~~~~~~s~dg~~l~~~~~~~~~v~v~~~d~~~g~~~~~ 316 (343)
T 1ri6_A 241 DGRHLYACDRT--ASLITVFSVSEDGSVLSKEGFQ-PTETQPRGFNVDHSGKYLIAAGQKSHHISVYEIVGEQGLLHEK 316 (343)
T ss_dssp TSSEEEEEETT--TTEEEEEEECTTSCCEEEEEEE-ECSSSCCCEEECTTSSEEEEECTTTCEEEEEEEETTTTEEEEE
T ss_pred CCCEEEEEecC--CCEEEEEEEcCCCCceEEeeee-cCCCccceEEECCCCCEEEEecCCCCeEEEEEEcCCCceeeEc
Confidence 454 5544433 67899999985 4567776666 443334456667788754 444 35667666 8888877654
No 52
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=90.65 E-value=7 Score=33.02 Aligned_cols=199 Identities=6% Similarity=0.004 Sum_probs=98.3
Q ss_pred cceEEEee-cCceEEEEecchhhhhcCCCCcccCCcCCceeeeeEEeecCCCCCeEEEEEEEEecCccccccCCCceEEE
Q 045559 97 EGLFIMFI-GGDEIALYNHATRDLKFLPKLTLIDNLESIYTIMFGLGLDPKCNYYKLVYIVTYHDSELGKVLNDSRQVFI 175 (335)
Q Consensus 97 ~GLl~~~~-~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~l~~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~~~v 175 (335)
+|-|.+.. ....++.+||.|++...+.... . ..++.+++..+ + ++. . ...+.+
T Consensus 24 ~~~l~~~d~~~~~i~~~d~~~~~~~~~~~~~-~---------~~~i~~~~dG~-l-~v~--~------------~~~l~~ 77 (297)
T 3g4e_A 24 SNSLLFVDIPAKKVCRWDSFTKQVQRVTMDA-P---------VSSVALRQSGG-Y-VAT--I------------GTKFCA 77 (297)
T ss_dssp TTEEEEEETTTTEEEEEETTTCCEEEEECSS-C---------EEEEEEBTTSS-E-EEE--E------------TTEEEE
T ss_pred CCEEEEEECCCCEEEEEECCCCcEEEEeCCC-c---------eEEEEECCCCC-E-EEE--E------------CCeEEE
Confidence 45444444 4678899999998765443221 1 34667776543 2 222 1 235788
Q ss_pred EEcCCCcceecCcccc--cccccCCCceeeeecceEEEEeecCCCC---CccCceEEEEEECCccceeeecCCCccccCC
Q 045559 176 YSFSDNSWRNFQGFEF--GMYDLDEVLDCTYHNGACHWLVPFGAFH---PLCCHYVILSFDMSDEVFEEILGPNCLLEIS 250 (335)
Q Consensus 176 yss~~~~W~~~~~~p~--~~~~~~~~~~~v~~~G~~ywl~~~~~~~---~~~~~~~i~~fD~~~e~~~~i~~P~~~~~~~ 250 (335)
|+.+++..+.+...+. +..... .-.+--+|.+|+-....... .......|..+|.... ...+. ....
T Consensus 78 ~d~~~g~~~~~~~~~~~~~~~~~~--di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~-~~~~~--~~~~--- 149 (297)
T 3g4e_A 78 LNWKEQSAVVLATVDNDKKNNRFN--DGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDHH-VKKYF--DQVD--- 149 (297)
T ss_dssp EETTTTEEEEEEECCTTCSSEEEE--EEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTSC-EEEEE--EEES---
T ss_pred EECCCCcEEEEEecCCCCCCCCCC--CEEECCCCCEEEecCCcccccccccCCCcEEEEEECCCC-EEEEe--eccc---
Confidence 8888887766542211 111111 11233368866544221100 0001357888887533 22221 0000
Q ss_pred CCeeEEEEe-CCe-EEEEEecCCCCEEEEEEECC-CCceeEEEEeccCC-ceeeeE--EEeeCCEEEEEe-cCCeEEEEe
Q 045559 251 PKHTVFGLY-NDS-LSFLVFDERESCFDIWTMKE-RYHWTKEFSTTPIL-AVDAPI--GFWKNDTFFIRS-NTEELLLYD 323 (335)
Q Consensus 251 ~~~~~l~~~-~g~-L~~~~~~~~~~~~~IW~l~~-~~~W~~~~~i~~~~-~~~~~~--~~~~~~~il~~~-~~~~l~~yd 323 (335)
....++.. +|+ |++.... ...+.+|-++. .........+..+. ....|- ++..+|.+++.. ....|..||
T Consensus 150 -~pngi~~spdg~~lyv~~~~--~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~~~~~v~~~d 226 (297)
T 3g4e_A 150 -ISNGLDWSLDHKIFYYIDSL--SYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVACYNGGRVIRLD 226 (297)
T ss_dssp -BEEEEEECTTSCEEEEEEGG--GTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEEEETTTEEEEEC
T ss_pred -cccceEEcCCCCEEEEecCC--CCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCEEEEEcCCCEEEEEc
Confidence 11123333 555 6666654 46677777652 33332211110111 112344 445578887765 456799999
Q ss_pred CCCCce-eec
Q 045559 324 PNSEEI-IDF 332 (335)
Q Consensus 324 ~~~~~~-~~v 332 (335)
++++++ .++
T Consensus 227 ~~tG~~~~~i 236 (297)
T 3g4e_A 227 PVTGKRLQTV 236 (297)
T ss_dssp TTTCCEEEEE
T ss_pred CCCceEEEEE
Confidence 996554 444
No 53
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=89.91 E-value=9.1 Score=33.41 Aligned_cols=112 Identities=5% Similarity=-0.083 Sum_probs=63.0
Q ss_pred eeeeecceEEEEeecCCCCCccCceEEEEEECCccceeee-cCCCcccc----CCCCeeEEEEeCCeEEEEEecCCCCEE
Q 045559 201 DCTYHNGACHWLVPFGAFHPLCCHYVILSFDMSDEVFEEI-LGPNCLLE----ISPKHTVFGLYNDSLSFLVFDERESCF 275 (335)
Q Consensus 201 ~~v~~~G~~ywl~~~~~~~~~~~~~~i~~fD~~~e~~~~i-~~P~~~~~----~~~~~~~l~~~~g~L~~~~~~~~~~~~ 275 (335)
.++..+|.+|..... ..|.+||.++.+.... .++..... ........+..+|.+++.... ..+
T Consensus 48 ~p~v~~~~v~~~~~~---------g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~~---g~l 115 (376)
T 3q7m_A 48 HPALADNVVYAADRA---------GLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGGVTVSGGHVYIGSEK---AQV 115 (376)
T ss_dssp CCEEETTEEEEECTT---------SEEEEEETTTCCEEEEEECCC---CCSCCCCCEEEEEEEETTEEEEEETT---SEE
T ss_pred ccEEECCEEEEEcCC---------CeEEEEEccCCceeeeecCccccccccccCcccccCceEeCCEEEEEcCC---CEE
Confidence 378899999887653 3799999865543322 33321100 001234456677877776543 334
Q ss_pred EEEEECC-CCceeEEEEeccCCceeeeEEEeeCCEEEEEecCCeEEEEeCCCCce
Q 045559 276 DIWTMKE-RYHWTKEFSTTPILAVDAPIGFWKNDTFFIRSNTEELLLYDPNSEEI 329 (335)
Q Consensus 276 ~IW~l~~-~~~W~~~~~i~~~~~~~~~~~~~~~~~il~~~~~~~l~~yd~~~~~~ 329 (335)
..+-.+. ...|.. .+ +-.....|+. .++.+++...+..|+.+|+++++.
T Consensus 116 ~a~d~~tG~~~W~~--~~-~~~~~~~p~~--~~~~v~v~~~~g~l~~~d~~tG~~ 165 (376)
T 3q7m_A 116 YALNTSDGTVAWQT--KV-AGEALSRPVV--SDGLVLIHTSNGQLQALNEADGAV 165 (376)
T ss_dssp EEEETTTCCEEEEE--EC-SSCCCSCCEE--ETTEEEEECTTSEEEEEETTTCCE
T ss_pred EEEECCCCCEEEEE--eC-CCceEcCCEE--ECCEEEEEcCCCeEEEEECCCCcE
Confidence 3333333 456754 23 2121233433 367777777777899999988763
No 54
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=89.75 E-value=5.1 Score=35.91 Aligned_cols=112 Identities=13% Similarity=0.075 Sum_probs=68.2
Q ss_pred ecceEEEEeecCCCCCccCceEEEEEECCccceeee-cCC---------CccccCCCCeeEEEEe--CCeEEEEEecC--
Q 045559 205 HNGACHWLVPFGAFHPLCCHYVILSFDMSDEVFEEI-LGP---------NCLLEISPKHTVFGLY--NDSLSFLVFDE-- 270 (335)
Q Consensus 205 ~~G~~ywl~~~~~~~~~~~~~~i~~fD~~~e~~~~i-~~P---------~~~~~~~~~~~~l~~~--~g~L~~~~~~~-- 270 (335)
.+|.++|.+..+ .+..+|+.++.-..+ +.. ..... ....++.. +++|++.....
T Consensus 236 ~dG~~~~vs~~g---------~V~v~d~~~~~~~v~~~~~~~~~~~~~~g~~p~---g~q~~a~~~~~~~lyV~~~~~~~ 303 (386)
T 3sjl_D 236 KAGRLVWPTYTG---------KIHQIDLSSGDAKFLPAVEALTEAERADGWRPG---GWQQVAYHRALDRIYLLVDQRDE 303 (386)
T ss_dssp TTTEEEEEBTTS---------EEEEEECTTSSCEECCCEESSCHHHHHTTEEEC---SSSCEEEETTTTEEEEEEEECCT
T ss_pred CCCcEEEEeCCC---------EEEEEECCCCcceeecceeccccccccccccCC---CcceeeECCCCCeEEEEeccccc
Confidence 478888877643 688899977653322 111 10000 11113332 45588876521
Q ss_pred ---CCCEEEEEEECCCCceeEEEEeccCCceeeeEEEeeCCE-EEEE-e-cCCeEEEEeCCCCcee
Q 045559 271 ---RESCFDIWTMKERYHWTKEFSTTPILAVDAPIGFWKNDT-FFIR-S-NTEELLLYDPNSEEII 330 (335)
Q Consensus 271 ---~~~~~~IW~l~~~~~W~~~~~i~~~~~~~~~~~~~~~~~-il~~-~-~~~~l~~yd~~~~~~~ 330 (335)
....=+||++|- ..+..+.+| ++..-..-+.+..|++ .++. . .++.|.+||..+++..
T Consensus 304 ~~hk~~~~~V~viD~-~t~kv~~~i-~vg~~~~~lavs~D~~~~ly~tn~~~~~VsViD~~t~k~~ 367 (386)
T 3sjl_D 304 WRHKTASRFVVVLDA-KTGERLAKF-EMGHEIDSINVSQDEKPLLYALSTGDKTLYIHDAESGEEL 367 (386)
T ss_dssp TCTTSCEEEEEEEET-TTCCEEEEE-EEEEEECEEEECSSSSCEEEEEETTTTEEEEEETTTCCEE
T ss_pred cccCCCCCEEEEEEC-CCCeEEEEE-ECCCCcceEEECCCCCeEEEEEcCCCCeEEEEECCCCcEE
Confidence 123568999997 677777788 6654444577778876 5544 3 3678999999998763
No 55
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=89.48 E-value=5 Score=33.91 Aligned_cols=111 Identities=10% Similarity=-0.009 Sum_probs=67.6
Q ss_pred eeeee-cceEEEEeecCCCCCccCceEEEEEECCccce-eeecCCCccccCCCCeeEEEEeCCeEEEEEecCCCCEEEEE
Q 045559 201 DCTYH-NGACHWLVPFGAFHPLCCHYVILSFDMSDEVF-EEILGPNCLLEISPKHTVFGLYNDSLSFLVFDERESCFDIW 278 (335)
Q Consensus 201 ~~v~~-~G~~ywl~~~~~~~~~~~~~~i~~fD~~~e~~-~~i~~P~~~~~~~~~~~~l~~~~g~L~~~~~~~~~~~~~IW 278 (335)
+++.. +|.+|.-+... ..|..+|+++.+. ..+ +|+.. ....+...+++|+++... .+. +|
T Consensus 58 qGL~~~~~~Ly~stG~~--------g~v~~iD~~Tgkv~~~~-l~~~~-----FgeGit~~g~~Ly~ltw~--~~~--v~ 119 (268)
T 3nok_A 58 QGLVFHQGHFFESTGHQ--------GTLRQLSLESAQPVWME-RLGNI-----FAEGLASDGERLYQLTWT--EGL--LF 119 (268)
T ss_dssp EEEEEETTEEEEEETTT--------TEEEECCSSCSSCSEEE-ECTTC-----CEEEEEECSSCEEEEESS--SCE--EE
T ss_pred ceEEEECCEEEEEcCCC--------CEEEEEECCCCcEEeEE-CCCCc-----ceeEEEEeCCEEEEEEcc--CCE--EE
Confidence 35444 45566555432 2499999987765 444 55432 223466678889998654 344 56
Q ss_pred EECCCCceeEEEEeccCCceeeeEEEeeCCE-EEEEecCCeEEEEeCCCCce-eecc
Q 045559 279 TMKERYHWTKEFSTTPILAVDAPIGFWKNDT-FFIRSNTEELLLYDPNSEEI-IDFQ 333 (335)
Q Consensus 279 ~l~~~~~W~~~~~i~~~~~~~~~~~~~~~~~-il~~~~~~~l~~yd~~~~~~-~~v~ 333 (335)
+.+. ..-..+.+| +... ...++..+++ ++......++...|++|.+. ..|+
T Consensus 120 V~D~-~Tl~~~~ti-~~~~--eGwGLt~Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~ 172 (268)
T 3nok_A 120 TWSG-MPPQRERTT-RYSG--EGWGLCYWNGKLVRSDGGTMLTFHEPDGFALVGAVQ 172 (268)
T ss_dssp EEET-TTTEEEEEE-ECSS--CCCCEEEETTEEEEECSSSEEEEECTTTCCEEEEEE
T ss_pred EEEC-CcCcEEEEE-eCCC--ceeEEecCCCEEEEECCCCEEEEEcCCCCeEEEEEE
Confidence 6665 344566677 5542 3455555655 55555578899999999655 3443
No 56
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=88.88 E-value=9.9 Score=32.17 Aligned_cols=191 Identities=9% Similarity=0.017 Sum_probs=98.5
Q ss_pred cceEEEee-cCceEEEEecchhhhhcCCCCcccCCcCCceeeeeEEeecCCCCCeEEEEEEEEecCccccccCCCceEEE
Q 045559 97 EGLFIMFI-GGDEIALYNHATRDLKFLPKLTLIDNLESIYTIMFGLGLDPKCNYYKLVYIVTYHDSELGKVLNDSRQVFI 175 (335)
Q Consensus 97 ~GLl~~~~-~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~l~~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~~~v 175 (335)
.+.+.+.. ....+.++|+.|++....-..... . . ++.++|..+ + ++... .....+.+
T Consensus 9 ~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~-------~-~-~~~~s~dg~-~-l~~~~-----------~~~~~i~~ 66 (331)
T 3u4y_A 9 SNFGIVVEQHLRRISFFSTDTLEILNQITLGYD-------F-V-DTAITSDCS-N-VVVTS-----------DFCQTLVQ 66 (331)
T ss_dssp CCEEEEEEGGGTEEEEEETTTCCEEEEEECCCC-------E-E-EEEECSSSC-E-EEEEE-----------STTCEEEE
T ss_pred CCEEEEEecCCCeEEEEeCcccceeeeEEccCC-------c-c-eEEEcCCCC-E-EEEEe-----------CCCCeEEE
Confidence 44444444 467899999999887543222221 1 3 777777543 2 22221 11337888
Q ss_pred EEcCCCcceecCcccccccccCCCc-eeeeecce-EEEEeecCCCCCccCceEEEEEECCccceeee-cCCCccccCCCC
Q 045559 176 YSFSDNSWRNFQGFEFGMYDLDEVL-DCTYHNGA-CHWLVPFGAFHPLCCHYVILSFDMSDEVFEEI-LGPNCLLEISPK 252 (335)
Q Consensus 176 yss~~~~W~~~~~~p~~~~~~~~~~-~~v~~~G~-~ywl~~~~~~~~~~~~~~i~~fD~~~e~~~~i-~~P~~~~~~~~~ 252 (335)
++..++.-... ..... ..+ .. -.+.-+|. +| ....... ...|..+|+.+.+.... +....
T Consensus 67 ~d~~~~~~~~~-~~~~~--~~~-~~~~~~s~dg~~l~-~~~~~~~-----~~~i~v~d~~~~~~~~~~~~~~~------- 129 (331)
T 3u4y_A 67 IETQLEPPKVV-AIQEG--QSS-MADVDITPDDQFAV-TVTGLNH-----PFNMQSYSFLKNKFISTIPIPYD------- 129 (331)
T ss_dssp EECSSSSCEEE-EEEEC--SSC-CCCEEECTTSSEEE-ECCCSSS-----SCEEEEEETTTTEEEEEEECCTT-------
T ss_pred EECCCCceeEE-ecccC--CCC-ccceEECCCCCEEE-EecCCCC-----cccEEEEECCCCCeEEEEECCCC-------
Confidence 88887754110 01110 001 00 12333454 44 3322100 22789999987655332 33221
Q ss_pred eeEEEEe-CCe-EEEEEecCCCCE-EEEEEECCCCce-eE-EEEeccCCceeeeEEEeeCCE-EEEEe-cCCeEEEEeCC
Q 045559 253 HTVFGLY-NDS-LSFLVFDERESC-FDIWTMKERYHW-TK-EFSTTPILAVDAPIGFWKNDT-FFIRS-NTEELLLYDPN 325 (335)
Q Consensus 253 ~~~l~~~-~g~-L~~~~~~~~~~~-~~IW~l~~~~~W-~~-~~~i~~~~~~~~~~~~~~~~~-il~~~-~~~~l~~yd~~ 325 (335)
...++.. +|+ |++.... ... +.+|.++....- .. ...+ +......-+.+.++|+ +++.. .++.+..||++
T Consensus 130 ~~~~~~spdg~~l~~~~~~--~~~~i~~~~~~~~g~~~~~~~~~~-~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~ 206 (331)
T 3u4y_A 130 AVGIAISPNGNGLILIDRS--SANTVRRFKIDADGVLFDTGQEFI-SGGTRPFNITFTPDGNFAFVANLIGNSIGILETQ 206 (331)
T ss_dssp EEEEEECTTSSCEEEEEET--TTTEEEEEEECTTCCEEEEEEEEE-CSSSSEEEEEECTTSSEEEEEETTTTEEEEEECS
T ss_pred ccceEECCCCCEEEEEecC--CCceEEEEEECCCCcEeecCCccc-cCCCCccceEECCCCCEEEEEeCCCCeEEEEECC
Confidence 1233333 565 6666665 345 999999872221 11 1223 2332344456677887 55554 36789999998
Q ss_pred CCce
Q 045559 326 SEEI 329 (335)
Q Consensus 326 ~~~~ 329 (335)
+++.
T Consensus 207 ~~~~ 210 (331)
T 3u4y_A 207 NPEN 210 (331)
T ss_dssp STTS
T ss_pred CCcc
Confidence 8774
No 57
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=88.65 E-value=8.3 Score=32.60 Aligned_cols=97 Identities=5% Similarity=0.040 Sum_probs=52.4
Q ss_pred EEEEEECC--ccceeee-cCCCccccCCCCeeEEEE-eCCe-EEEEEecCCCCEEEEEEECCCCceeEEEEeccCCceee
Q 045559 226 VILSFDMS--DEVFEEI-LGPNCLLEISPKHTVFGL-YNDS-LSFLVFDERESCFDIWTMKERYHWTKEFSTTPILAVDA 300 (335)
Q Consensus 226 ~i~~fD~~--~e~~~~i-~~P~~~~~~~~~~~~l~~-~~g~-L~~~~~~~~~~~~~IW~l~~~~~W~~~~~i~~~~~~~~ 300 (335)
.|..||+. +..+..+ ..+.... ...++. -+|+ |++.... ...+.+|-+++.........+ +......
T Consensus 61 ~v~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~s~dg~~l~~~~~~--~~~i~~~d~~~~~~~~~~~~~-~~~~~~~ 132 (343)
T 1ri6_A 61 RVLAYRIAPDDGALTFAAESALPGS-----LTHISTDHQGQFVFVGSYN--AGNVSVTRLEDGLPVGVVDVV-EGLDGCH 132 (343)
T ss_dssp EEEEEEECTTTCCEEEEEEEECSSC-----CSEEEECTTSSEEEEEETT--TTEEEEEEEETTEEEEEEEEE-CCCTTBC
T ss_pred eEEEEEecCCCCceeeccccccCCC-----CcEEEEcCCCCEEEEEecC--CCeEEEEECCCCccccccccc-cCCCCce
Confidence 56666665 5565544 2222111 112333 3555 5554443 578999988531223333444 3322244
Q ss_pred eEEEeeCCE-EEEEe-cCCeEEEEeCCC-Ccee
Q 045559 301 PIGFWKNDT-FFIRS-NTEELLLYDPNS-EEII 330 (335)
Q Consensus 301 ~~~~~~~~~-il~~~-~~~~l~~yd~~~-~~~~ 330 (335)
-+.+.++|+ +++.. .+..+..||+++ ++++
T Consensus 133 ~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~ 165 (343)
T 1ri6_A 133 SANISPDNRTLWVPALKQDRICLFTVSDDGHLV 165 (343)
T ss_dssp CCEECTTSSEEEEEEGGGTEEEEEEECTTSCEE
T ss_pred EEEECCCCCEEEEecCCCCEEEEEEecCCCcee
Confidence 455667776 55544 567899999987 6664
No 58
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=88.27 E-value=17 Score=34.03 Aligned_cols=197 Identities=9% Similarity=0.073 Sum_probs=100.7
Q ss_pred cccceEEEee-cCceEEEEecchhhhhc-CCCCcccCCcCCceeeeeEEeecCCCCCeEEEEEEEEecCccccccCCCce
Q 045559 95 PFEGLFIMFI-GGDEIALYNHATRDLKF-LPKLTLIDNLESIYTIMFGLGLDPKCNYYKLVYIVTYHDSELGKVLNDSRQ 172 (335)
Q Consensus 95 s~~GLl~~~~-~~~~~~V~NP~T~~~~~-LP~~~~~~~~~~~~~~~~~l~~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~ 172 (335)
+-+|.+++.. ....+.|+|+.|++... ++. . .. ..++.++|.. .|-++.- . .-.
T Consensus 146 ~p~~~~~vs~~~d~~V~v~D~~t~~~~~~i~~---g-----~~--~~~v~~spdg-~~l~v~~------------~-d~~ 201 (543)
T 1nir_A 146 DLPNLFSVTLRDAGQIALVDGDSKKIVKVIDT---G-----YA--VHISRMSASG-RYLLVIG------------R-DAR 201 (543)
T ss_dssp CGGGEEEEEEGGGTEEEEEETTTCCEEEEEEC---S-----TT--EEEEEECTTS-CEEEEEE------------T-TSE
T ss_pred CCCCEEEEEEcCCCeEEEEECCCceEEEEEec---C-----cc--cceEEECCCC-CEEEEEC------------C-CCe
Confidence 4467777666 36689999999987642 221 1 11 3466677643 3322221 1 146
Q ss_pred EEEEEc--CCCcceecCcccccccccCCCceeeee-----cceEEEEeecCCCCCccCceEEEEEECCccceee-ecCCC
Q 045559 173 VFIYSF--SDNSWRNFQGFEFGMYDLDEVLDCTYH-----NGACHWLVPFGAFHPLCCHYVILSFDMSDEVFEE-ILGPN 244 (335)
Q Consensus 173 ~~vyss--~~~~W~~~~~~p~~~~~~~~~~~~v~~-----~G~~ywl~~~~~~~~~~~~~~i~~fD~~~e~~~~-i~~P~ 244 (335)
+.+|+. +++. .+..++... .+ ...++. +|..-+.+... ...|..+|..+.+... ++.+.
T Consensus 202 V~v~D~~~~t~~--~~~~i~~g~--~p--~~va~sp~~~~dg~~l~v~~~~-------~~~v~v~D~~t~~~~~~i~~~g 268 (543)
T 1nir_A 202 IDMIDLWAKEPT--KVAEIKIGI--EA--RSVESSKFKGYEDRYTIAGAYW-------PPQFAIMDGETLEPKQIVSTRG 268 (543)
T ss_dssp EEEEETTSSSCE--EEEEEECCS--EE--EEEEECCSTTCTTTEEEEEEEE-------SSEEEEEETTTCCEEEEEECCE
T ss_pred EEEEECcCCCCc--EEEEEecCC--Cc--ceEEeCCCcCCCCCEEEEEEcc-------CCeEEEEeccccccceeecccC
Confidence 888888 4432 222222211 11 012222 56533333321 2367788987765433 34432
Q ss_pred cccc-----CCCCeeEEEEe-CCeEEEEEecCCCCEEEEEEECCCCceeEEEEeccCCceeeeEEEeeCCEEEEE-e-cC
Q 045559 245 CLLE-----ISPKHTVFGLY-NDSLSFLVFDERESCFDIWTMKERYHWTKEFSTTPILAVDAPIGFWKNDTFFIR-S-NT 316 (335)
Q Consensus 245 ~~~~-----~~~~~~~l~~~-~g~L~~~~~~~~~~~~~IW~l~~~~~W~~~~~i~~~~~~~~~~~~~~~~~il~~-~-~~ 316 (335)
.... .+..-..+... +|...++.... ...+.+|-+++ ..=.+..++ +.....+-+++.++|+.++. . .+
T Consensus 269 ~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~-~g~i~vvd~~~-~~~l~~~~i-~~~~~~~~~~~spdg~~l~va~~~~ 345 (543)
T 1nir_A 269 MTVDTQTYHPEPRVAAIIASHEHPEFIVNVKE-TGKVLLVNYKD-IDNLTVTSI-GAAPFLHDGGWDSSHRYFMTAANNS 345 (543)
T ss_dssp ECSSSCCEESCCCEEEEEECSSSSEEEEEETT-TTEEEEEECTT-SSSCEEEEE-ECCSSCCCEEECTTSCEEEEEEGGG
T ss_pred cccCccccccCCceEEEEECCCCCEEEEEECC-CCeEEEEEecC-CCcceeEEe-ccCcCccCceECCCCCEEEEEecCC
Confidence 1100 00011233333 34444444432 67777777766 221233455 44444555677788885543 3 36
Q ss_pred CeEEEEeCCCCceee
Q 045559 317 EELLLYDPNSEEIID 331 (335)
Q Consensus 317 ~~l~~yd~~~~~~~~ 331 (335)
+.+.++|++++++..
T Consensus 346 ~~v~v~D~~tg~l~~ 360 (543)
T 1nir_A 346 NKVAVIDSKDRRLSA 360 (543)
T ss_dssp TEEEEEETTTTEEEE
T ss_pred CeEEEEECCCCeEEE
Confidence 789999999988754
No 59
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=87.94 E-value=11 Score=31.57 Aligned_cols=193 Identities=10% Similarity=0.030 Sum_probs=90.7
Q ss_pred cCceEEEEecchhhhhcCCCCcccCCcCCceeeeeEEeecCCCCCeEEEEEEEEecCccccccCCCceEEEEEcCCCcce
Q 045559 105 GGDEIALYNHATRDLKFLPKLTLIDNLESIYTIMFGLGLDPKCNYYKLVYIVTYHDSELGKVLNDSRQVFIYSFSDNSWR 184 (335)
Q Consensus 105 ~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~l~~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~~~vyss~~~~W~ 184 (335)
....++++||.+++...+..+... +......++.+|+..+. +... . . ...+.+|+.. +..+
T Consensus 44 ~~~~i~~~d~~~g~~~~~~~~~~~----~~~~~~~~i~~~~~~g~--l~v~-~--~---------~~~l~~~d~~-g~~~ 104 (314)
T 1pjx_A 44 PAGEILRIDLKTGKKTVICKPEVN----GYGGIPAGCQCDRDANQ--LFVA-D--M---------RLGLLVVQTD-GTFE 104 (314)
T ss_dssp ECCEEEEECTTTCCEEEEECCEET----TEECCEEEEEECSSSSE--EEEE-E--T---------TTEEEEEETT-SCEE
T ss_pred CCCEEEEEeCCCCcEEEEEecccC----CCCCCCceEEEecCCCc--EEEE-E--C---------CCCEEEEeCC-CCEE
Confidence 366789999999887665431111 01111456777765222 2222 1 0 1257778877 6554
Q ss_pred ec-Cccccc-ccccCCCceeee--ecceEEEEeecCCC-------CCccCceEEEEEECCccceeeecCCCccccCCCCe
Q 045559 185 NF-QGFEFG-MYDLDEVLDCTY--HNGACHWLVPFGAF-------HPLCCHYVILSFDMSDEVFEEILGPNCLLEISPKH 253 (335)
Q Consensus 185 ~~-~~~p~~-~~~~~~~~~~v~--~~G~~ywl~~~~~~-------~~~~~~~~i~~fD~~~e~~~~i~~P~~~~~~~~~~ 253 (335)
.. ...... ..... ..+. -+|.+|+....... ........|..+|.. .++..+... .. ..
T Consensus 105 ~~~~~~~~~~~~~~~---~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~--~~----~~ 174 (314)
T 1pjx_A 105 EIAKKDSEGRRMQGC---NDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQVDTA--FQ----FP 174 (314)
T ss_dssp ECCSBCTTSCBCBCC---CEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEEEEEE--ES----SE
T ss_pred EEEeccCCCccccCC---cCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-CCEEEeccC--CC----Cc
Confidence 43 211111 00111 1333 36777655432100 000002578999987 444433110 00 11
Q ss_pred eEEEE-----eCCe-EEEEEecCCCCEEEEEEECCCCceeEEEEec--cCC--ceeeeEEEeeCCEEEEEe-cCCeEEEE
Q 045559 254 TVFGL-----YNDS-LSFLVFDERESCFDIWTMKERYHWTKEFSTT--PIL--AVDAPIGFWKNDTFFIRS-NTEELLLY 322 (335)
Q Consensus 254 ~~l~~-----~~g~-L~~~~~~~~~~~~~IW~l~~~~~W~~~~~i~--~~~--~~~~~~~~~~~~~il~~~-~~~~l~~y 322 (335)
..++. -+|+ |++.... ...+.+|-++..........+. +.. ....-+++.++|.+++.. ..+.|..|
T Consensus 175 ~~i~~~~~~d~dg~~l~v~~~~--~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~~~~~~i~~~ 252 (314)
T 1pjx_A 175 NGIAVRHMNDGRPYQLIVAETP--TKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNLLVANWGSSHIEVF 252 (314)
T ss_dssp EEEEEEECTTSCEEEEEEEETT--TTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCEEEEEETTTEEEEE
T ss_pred ceEEEecccCCCCCEEEEEECC--CCeEEEEECCCCCccccceEEEECCCCCCCCCCceEECCCCCEEEEEcCCCEEEEE
Confidence 12332 3453 5665543 4667777665213332221111 111 222334445678887765 46689999
Q ss_pred eCCCCc
Q 045559 323 DPNSEE 328 (335)
Q Consensus 323 d~~~~~ 328 (335)
|+++++
T Consensus 253 d~~~g~ 258 (314)
T 1pjx_A 253 GPDGGQ 258 (314)
T ss_dssp CTTCBS
T ss_pred cCCCCc
Confidence 998544
No 60
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=87.45 E-value=15 Score=32.59 Aligned_cols=186 Identities=7% Similarity=-0.029 Sum_probs=91.6
Q ss_pred cceEEEeecCceEEEEecchhhhhcCCCCcccCCcCCceeeeeEEeecCCCCCeEEEEEEEEecCccccccCCCceEEEE
Q 045559 97 EGLFIMFIGGDEIALYNHATRDLKFLPKLTLIDNLESIYTIMFGLGLDPKCNYYKLVYIVTYHDSELGKVLNDSRQVFIY 176 (335)
Q Consensus 97 ~GLl~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~l~~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~~~vy 176 (335)
.+.|++.. ...+...++.+++...+-.... ...++.+|+..+.. +.. . .....+..+
T Consensus 87 ~~~l~~~~-~~~I~~i~~~~~~~~~~~~~~~---------~~~gl~~d~~~~~l--y~~-D----------~~~~~I~r~ 143 (386)
T 3v65_B 87 EPVLLFAN-RIDIRQVLPHRSEYTLLLNNLE---------NAIALDFHHRRELV--FWS-D----------VTLDRILRA 143 (386)
T ss_dssp CCEEEEEC-BSCEEEECTTSCCCEEEECSCS---------CEEEEEEETTTTEE--EEE-E----------TTTTEEEEE
T ss_pred cceeEeec-CccceeeccCCCcEEEEecCCC---------ccEEEEEecCCCeE--EEE-e----------CCCCcEEEE
Confidence 45555554 4556666666554433322111 15678888755432 222 1 123456777
Q ss_pred EcCCCcceecCcccccccccCCCceeee---ecceEEEEeecCCCCCccCceEEEEEECCccceeeecCCCccccCCCCe
Q 045559 177 SFSDNSWRNFQGFEFGMYDLDEVLDCTY---HNGACHWLVPFGAFHPLCCHYVILSFDMSDEVFEEILGPNCLLEISPKH 253 (335)
Q Consensus 177 ss~~~~W~~~~~~p~~~~~~~~~~~~v~---~~G~~ywl~~~~~~~~~~~~~~i~~fD~~~e~~~~i~~P~~~~~~~~~~ 253 (335)
+..++..+.+.... .. .+ .++. .+|.+||.... ...|..+|+....-..+. ..... ..
T Consensus 144 ~~~g~~~~~~~~~~--~~-~p---~glavd~~~g~lY~~d~~--------~~~I~~~~~dg~~~~~l~-~~~l~----~P 204 (386)
T 3v65_B 144 NLNGSNVEEVVSTG--LE-SP---GGLAVDWVHDKLYWTDSG--------TSRIEVANLDGAHRKVLL-WQSLE----KP 204 (386)
T ss_dssp ETTSCCEEEEECSS--CS-CC---CCEEEETTTTEEEEEETT--------TTEEEECBTTSCSCEEEE-CSSCS----CE
T ss_pred ecCCCCcEEEEeCC--CC-Cc---cEEEEEeCCCeEEEEcCC--------CCeEEEEeCCCCceEEee-cCCCC----CC
Confidence 77666544332111 11 11 1333 36899998754 347888888755433331 11111 12
Q ss_pred eEEEEe--CCeEEEEEecCCCCEEEEEEECCCCceeEEEEeccCCceeeeEEEe---eCCEEEEEec-CCeEEEEeCCCC
Q 045559 254 TVFGLY--NDSLSFLVFDERESCFDIWTMKERYHWTKEFSTTPILAVDAPIGFW---KNDTFFIRSN-TEELLLYDPNSE 327 (335)
Q Consensus 254 ~~l~~~--~g~L~~~~~~~~~~~~~IW~l~~~~~W~~~~~i~~~~~~~~~~~~~---~~~~il~~~~-~~~l~~yd~~~~ 327 (335)
..|+.. +|.|++..... ... |++.+....-... .+ ...+..|.++. .++.|++... ..+|.++|+++.
T Consensus 205 ~giavdp~~g~ly~td~~~-~~~--I~r~~~dG~~~~~-~~--~~~~~~PnGlavd~~~~~lY~aD~~~~~I~~~d~dG~ 278 (386)
T 3v65_B 205 RAIALHPMEGTIYWTDWGN-TPR--IEASSMDGSGRRI-IA--DTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGS 278 (386)
T ss_dssp EEEEEETTTTEEEEEECSS-SCE--EEEEETTSCSCEE-EE--CSSCSCEEEEEEEGGGTEEEEEETTTTEEEEECTTSC
T ss_pred cEEEEEcCCCeEEEeccCC-CCE--EEEEeCCCCCcEE-EE--ECCCCCeeeEEEeCCCCEEEEEECCCCEEEEEeCCCC
Confidence 234443 67788776542 244 4444431221111 11 12234555543 2466766553 567999998765
Q ss_pred cee
Q 045559 328 EII 330 (335)
Q Consensus 328 ~~~ 330 (335)
..+
T Consensus 279 ~~~ 281 (386)
T 3v65_B 279 HRK 281 (386)
T ss_dssp SCE
T ss_pred eeE
Confidence 443
No 61
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=87.08 E-value=11 Score=33.40 Aligned_cols=69 Identities=12% Similarity=0.093 Sum_probs=47.4
Q ss_pred CeEEEEEecCCC-----CEEEEEEECCCCceeEEEEeccCCceeeeEEEeeCCE-EEEEec--CCeEEEEeCCCCceee
Q 045559 261 DSLSFLVFDERE-----SCFDIWTMKERYHWTKEFSTTPILAVDAPIGFWKNDT-FFIRSN--TEELLLYDPNSEEIID 331 (335)
Q Consensus 261 g~L~~~~~~~~~-----~~~~IW~l~~~~~W~~~~~i~~~~~~~~~~~~~~~~~-il~~~~--~~~l~~yd~~~~~~~~ 331 (335)
++|++....... ..=+||+.+- .....+.+| +......-+.+.+||+ +++..+ ++.|.++|.++++..+
T Consensus 279 ~~lyV~~~~~~~~~~~~~~~~V~VID~-~t~~vv~~i-~~g~~p~~i~~s~Dg~~~l~v~~~~~~~V~ViD~~t~~vv~ 355 (373)
T 2mad_H 279 DGIYLLTSEQSAWKLHAAAKEVTSVTG-LVGQTSSQI-SLGHDVDAISVAQDGGPDLYALSAGTEVLHIYDAGAGDQDQ 355 (373)
T ss_pred CEEEEEeccCCcccccCCCCeEEEEEC-CCCEEEEEE-ECCCCcCeEEECCCCCeEEEEEcCCCCeEEEEECCCCCEEe
Confidence 447776543111 1236899986 667777888 7766566677788888 665543 6789999999987653
No 62
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=85.74 E-value=17 Score=31.65 Aligned_cols=186 Identities=8% Similarity=0.010 Sum_probs=92.9
Q ss_pred cceEEEeecCceEEEEecchhhhhcCCCCcccCCcCCceeeeeEEeecCCCCCeEEEEEEEEecCccccccCCCceEEEE
Q 045559 97 EGLFIMFIGGDEIALYNHATRDLKFLPKLTLIDNLESIYTIMFGLGLDPKCNYYKLVYIVTYHDSELGKVLNDSRQVFIY 176 (335)
Q Consensus 97 ~GLl~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~l~~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~~~vy 176 (335)
.+.|++.. ...+...++.+.+...+...... ..++.+|+..+.. +.. . .....+..+
T Consensus 44 ~~~ll~~~-~~~I~~i~~~g~~~~~~~~~~~~---------~~~l~~d~~~~~l--y~~-D----------~~~~~I~r~ 100 (349)
T 3v64_C 44 EPVLLFAN-RIDIRQVLPHRSEYTLLLNNLEN---------AIALDFHHRRELV--FWS-D----------VTLDRILRA 100 (349)
T ss_dssp CCEEEEEC-BSCEEEECTTSCCEEEEECSCSC---------EEEEEEETTTTEE--EEE-E----------TTTTEEEEE
T ss_pred CceeEeec-ccceEEEeCCCCeeEEeecCCCc---------eEEEEEeccccEE--EEE-e----------ccCCceEEE
Confidence 45555555 45566667665544333211111 5788888765432 222 1 123356677
Q ss_pred EcCCCcceecCcccccccccCCCceeee---ecceEEEEeecCCCCCccCceEEEEEECCccceeeecCCCccccCCCCe
Q 045559 177 SFSDNSWRNFQGFEFGMYDLDEVLDCTY---HNGACHWLVPFGAFHPLCCHYVILSFDMSDEVFEEILGPNCLLEISPKH 253 (335)
Q Consensus 177 ss~~~~W~~~~~~p~~~~~~~~~~~~v~---~~G~~ywl~~~~~~~~~~~~~~i~~fD~~~e~~~~i~~P~~~~~~~~~~ 253 (335)
+..++.-+.+... ... .+ .++. .+|.+||.... ...|.++|+....-..+. ..... ..
T Consensus 101 ~~~g~~~~~~~~~--~~~-~p---~glavd~~~g~ly~~d~~--------~~~I~~~~~dG~~~~~l~-~~~l~----~P 161 (349)
T 3v64_C 101 NLNGSNVEEVVST--GLE-SP---GGLAVDWVHDKLYWTDSG--------TSRIEVANLDGAHRKVLL-WQSLE----KP 161 (349)
T ss_dssp ETTSCSCEEEECS--SCS-CC---CEEEEETTTTEEEEEETT--------TTEEEEEETTSCSCEEEE-CTTCS----CE
T ss_pred ecCCCCceEEEeC--CCC-Cc---cEEEEecCCCeEEEEcCC--------CCeEEEEcCCCCceEEEE-eCCCC----Cc
Confidence 7666544332111 111 11 1333 36899998754 347889998765433331 11111 12
Q ss_pred eEEEEe--CCeEEEEEecCCCCEEEEEEECCCCceeEEEEeccCCceeeeEEEe---eCCEEEEEec-CCeEEEEeCCCC
Q 045559 254 TVFGLY--NDSLSFLVFDERESCFDIWTMKERYHWTKEFSTTPILAVDAPIGFW---KNDTFFIRSN-TEELLLYDPNSE 327 (335)
Q Consensus 254 ~~l~~~--~g~L~~~~~~~~~~~~~IW~l~~~~~W~~~~~i~~~~~~~~~~~~~---~~~~il~~~~-~~~l~~yd~~~~ 327 (335)
..++.. +|.|+...... ...|...-++. .-.+ .+ -...+..|.++. .++.+++... ..++..+|+.+.
T Consensus 162 ~~iavdp~~g~ly~td~~~-~~~I~r~~~dG--~~~~--~~-~~~~~~~PnGla~d~~~~~lY~aD~~~~~I~~~~~dG~ 235 (349)
T 3v64_C 162 RAIALHPMEGTIYWTDWGN-TPRIEASSMDG--SGRR--II-ADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGS 235 (349)
T ss_dssp EEEEEETTTTEEEEEECSS-SCEEEEEETTS--CSCE--ES-CCSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSC
T ss_pred ceEEEecCcCeEEEeccCC-CCEEEEEeCCC--CCcE--EE-EECCCCCcceEEEeCCCCEEEEEECCCCEEEEEeCCCC
Confidence 234444 67788776542 24444443443 1111 12 112344566544 2456766553 567999998765
Q ss_pred cee
Q 045559 328 EII 330 (335)
Q Consensus 328 ~~~ 330 (335)
..+
T Consensus 236 ~~~ 238 (349)
T 3v64_C 236 HRK 238 (349)
T ss_dssp SCE
T ss_pred ceE
Confidence 443
No 63
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=85.38 E-value=25 Score=33.15 Aligned_cols=194 Identities=12% Similarity=0.047 Sum_probs=100.2
Q ss_pred cceEEEee-cCceEEEEecchhhhh-cCCCCcccCCcCCceeeeeEEeecCCCCCeEEEEEEEEecCccccccCCCceEE
Q 045559 97 EGLFIMFI-GGDEIALYNHATRDLK-FLPKLTLIDNLESIYTIMFGLGLDPKCNYYKLVYIVTYHDSELGKVLNDSRQVF 174 (335)
Q Consensus 97 ~GLl~~~~-~~~~~~V~NP~T~~~~-~LP~~~~~~~~~~~~~~~~~l~~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~~~ 174 (335)
++++.+.. +...+.|+|+.|++.. .+|.... ..++.++|.. .|-.+. . . .-.+.
T Consensus 166 ~~~~~V~~~~~~~V~viD~~t~~v~~~i~~g~~----------p~~v~~SpDG-r~lyv~--~---~--------dg~V~ 221 (567)
T 1qks_A 166 ENLFSVTLRDAGQIALIDGSTYEIKTVLDTGYA----------VHISRLSASG-RYLFVI--G---R--------DGKVN 221 (567)
T ss_dssp GGEEEEEETTTTEEEEEETTTCCEEEEEECSSC----------EEEEEECTTS-CEEEEE--E---T--------TSEEE
T ss_pred CceEEEEeCCCCeEEEEECCCCeEEEEEeCCCC----------ccceEECCCC-CEEEEE--c---C--------CCeEE
Confidence 45665555 4678999999998755 3443322 2366677644 343332 1 1 22688
Q ss_pred EEEcCCCcceecCcccccccccCCCceeeee-----cce-EEEEeecCCCCCccCceEEEEEECCccceee-ecCCCc-c
Q 045559 175 IYSFSDNSWRNFQGFEFGMYDLDEVLDCTYH-----NGA-CHWLVPFGAFHPLCCHYVILSFDMSDEVFEE-ILGPNC-L 246 (335)
Q Consensus 175 vyss~~~~W~~~~~~p~~~~~~~~~~~~v~~-----~G~-~ywl~~~~~~~~~~~~~~i~~fD~~~e~~~~-i~~P~~-~ 246 (335)
+|+..+.+-+.+..++... .+ ....+. +|. +|..... ...+..+|..+.+-.. ++.... .
T Consensus 222 viD~~~~t~~~v~~i~~G~--~P--~~ia~s~~~~pDGk~l~v~n~~--------~~~v~ViD~~t~~~~~~i~~~~~~~ 289 (567)
T 1qks_A 222 MIDLWMKEPTTVAEIKIGS--EA--RSIETSKMEGWEDKYAIAGAYW--------PPQYVIMDGETLEPKKIQSTRGMTY 289 (567)
T ss_dssp EEETTSSSCCEEEEEECCS--EE--EEEEECCSTTCTTTEEEEEEEE--------TTEEEEEETTTCCEEEEEECCEECT
T ss_pred EEECCCCCCcEeEEEecCC--CC--ceeEEccccCCCCCEEEEEEcc--------CCeEEEEECCCCcEEEEEecccccc
Confidence 8887522223333222221 11 112333 675 4444333 2367888977654433 344321 1
Q ss_pred cc----CCCCeeEEEEeC-CeEEEEEecCCCCEEEEEEECC-CCceeEEEEeccCCceeeeEEEeeCCEEEEE-e-cCCe
Q 045559 247 LE----ISPKHTVFGLYN-DSLSFLVFDERESCFDIWTMKE-RYHWTKEFSTTPILAVDAPIGFWKNDTFFIR-S-NTEE 318 (335)
Q Consensus 247 ~~----~~~~~~~l~~~~-g~L~~~~~~~~~~~~~IW~l~~-~~~W~~~~~i~~~~~~~~~~~~~~~~~il~~-~-~~~~ 318 (335)
.. .+..-..+.... +...++... +.+.+ |+.+- .....+...| +.....+-.++..+|+.++. . ..++
T Consensus 290 ~~~~~~p~~rva~i~~s~~~~~~vv~~~-~~g~v--~~vd~~~~~~~~v~~i-~~~~~~~d~~~~pdgr~~~va~~~sn~ 365 (567)
T 1qks_A 290 DEQEYHPEPRVAAILASHYRPEFIVNVK-ETGKI--LLVDYTDLNNLKTTEI-SAERFLHDGGLDGSHRYFITAANARNK 365 (567)
T ss_dssp TTCCEESCCCEEEEEECSSSSEEEEEET-TTTEE--EEEETTCSSEEEEEEE-ECCSSEEEEEECTTSCEEEEEEGGGTE
T ss_pred ccccccCCCceEEEEEcCCCCEEEEEec-CCCeE--EEEecCCCccceeeee-eccccccCceECCCCCEEEEEeCCCCe
Confidence 00 000112333333 234444443 24544 44443 2445556666 45555566777788885543 3 4678
Q ss_pred EEEEeCCCCcee
Q 045559 319 LLLYDPNSEEII 330 (335)
Q Consensus 319 l~~yd~~~~~~~ 330 (335)
|.++|++++++.
T Consensus 366 V~ViD~~t~kl~ 377 (567)
T 1qks_A 366 LVVIDTKEGKLV 377 (567)
T ss_dssp EEEEETTTTEEE
T ss_pred EEEEECCCCcEE
Confidence 999999998874
No 64
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=85.28 E-value=15 Score=30.50 Aligned_cols=136 Identities=12% Similarity=-0.001 Sum_probs=79.6
Q ss_pred CceEEEEEcCCCcceecCcccccccccCCCceeeeecceEEEEeecCCCCCccCceEEEEEECCccce-eeecCCCcccc
Q 045559 170 SRQVFIYSFSDNSWRNFQGFEFGMYDLDEVLDCTYHNGACHWLVPFGAFHPLCCHYVILSFDMSDEVF-EEILGPNCLLE 248 (335)
Q Consensus 170 ~~~~~vyss~~~~W~~~~~~p~~~~~~~~~~~~v~~~G~~ywl~~~~~~~~~~~~~~i~~fD~~~e~~-~~i~~P~~~~~ 248 (335)
...+.+++.++++=... .+.+-..+. ..-+..++.+|-++.. ...+..||.++.+- ..++.|..
T Consensus 42 ~S~v~~vD~~tgkv~~~--~~l~~~~fg--eGi~~~~~~ly~ltw~--------~~~v~v~D~~tl~~~~ti~~~~~--- 106 (243)
T 3mbr_X 42 RSSVRKVDLETGRILQR--AEVPPPYFG--AGIVAWRDRLIQLTWR--------NHEGFVYDLATLTPRARFRYPGE--- 106 (243)
T ss_dssp SCEEEEEETTTCCEEEE--EECCTTCCE--EEEEEETTEEEEEESS--------SSEEEEEETTTTEEEEEEECSSC---
T ss_pred CceEEEEECCCCCEEEE--EeCCCCcce--eEEEEeCCEEEEEEee--------CCEEEEEECCcCcEEEEEeCCCC---
Confidence 56789999998743222 122211111 1245667889999876 44899999977544 44465532
Q ss_pred CCCCeeEEEEeCCeEEEEEecCCCCEEEEEEECCCCceeEEEEeccCCc----eeeeEEE-eeCCEEEEEe-cCCeEEEE
Q 045559 249 ISPKHTVFGLYNDSLSFLVFDERESCFDIWTMKERYHWTKEFSTTPILA----VDAPIGF-WKNDTFFIRS-NTEELLLY 322 (335)
Q Consensus 249 ~~~~~~~l~~~~g~L~~~~~~~~~~~~~IW~l~~~~~W~~~~~i~~~~~----~~~~~~~-~~~~~il~~~-~~~~l~~y 322 (335)
...|+.-+++|++... .. .|++++. ..=..+.+| .... +..+..+ +.+|+++... ..+.+.+-
T Consensus 107 ----Gwglt~dg~~L~vSdg---s~--~l~~iDp-~t~~~~~~I-~V~~~g~~~~~lNeLe~~~G~lyanvw~s~~I~vI 175 (243)
T 3mbr_X 107 ----GWALTSDDSHLYMSDG---TA--VIRKLDP-DTLQQVGSI-KVTAGGRPLDNLNELEWVNGELLANVWLTSRIARI 175 (243)
T ss_dssp ----CCEEEECSSCEEEECS---SS--EEEEECT-TTCCEEEEE-ECEETTEECCCEEEEEEETTEEEEEETTTTEEEEE
T ss_pred ----ceEEeeCCCEEEEECC---CC--eEEEEeC-CCCeEEEEE-EEccCCcccccceeeEEeCCEEEEEECCCCeEEEE
Confidence 2345555666888764 23 3788887 222344455 3321 1111111 2378888665 46789999
Q ss_pred eCCCCceee
Q 045559 323 DPNSEEIID 331 (335)
Q Consensus 323 d~~~~~~~~ 331 (335)
|+++++..+
T Consensus 176 Dp~tG~V~~ 184 (243)
T 3mbr_X 176 DPASGKVVA 184 (243)
T ss_dssp CTTTCBEEE
T ss_pred ECCCCCEEE
Confidence 999988743
No 65
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=85.10 E-value=16 Score=30.64 Aligned_cols=188 Identities=12% Similarity=0.047 Sum_probs=86.7
Q ss_pred ceEEEeecCceEEEEecchhhhhc-CCCCcccCCcCCceeeeeEEeecCCCCCeEEEEEEEEecCccccccCCCceEEEE
Q 045559 98 GLFIMFIGGDEIALYNHATRDLKF-LPKLTLIDNLESIYTIMFGLGLDPKCNYYKLVYIVTYHDSELGKVLNDSRQVFIY 176 (335)
Q Consensus 98 GLl~~~~~~~~~~V~NP~T~~~~~-LP~~~~~~~~~~~~~~~~~l~~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~~~vy 176 (335)
.+|........++++|+.|++.+. ++..... . .....++|.. . ++. .. ...+..|
T Consensus 6 ~~lv~~~~~~~v~~~d~~tG~~~w~~~~~~~~------~--~~~~~~~pdG-~--ilv-s~------------~~~V~~~ 61 (276)
T 3no2_A 6 HLLVGGSGWNKIAIINKDTKEIVWEYPLEKGW------E--CNSVAATKAG-E--ILF-SY------------SKGAKMI 61 (276)
T ss_dssp EEEEECTTCSEEEEEETTTTEEEEEEECCTTC------C--CCEEEECTTS-C--EEE-EC------------BSEEEEE
T ss_pred cEEEeeCCCCEEEEEECCCCeEEEEeCCCccC------C--CcCeEECCCC-C--EEE-eC------------CCCEEEE
Confidence 444444457788999999988653 3322101 0 1223334432 2 222 11 1246667
Q ss_pred EcCCC--cceecCcccccccccCCCceeeeecceEEEEeecCCCCCccCceEEEEEECCccceeeecCCCccccCC-CCe
Q 045559 177 SFSDN--SWRNFQGFEFGMYDLDEVLDCTYHNGACHWLVPFGAFHPLCCHYVILSFDMSDEVFEEILGPNCLLEIS-PKH 253 (335)
Q Consensus 177 ss~~~--~W~~~~~~p~~~~~~~~~~~~v~~~G~~ywl~~~~~~~~~~~~~~i~~fD~~~e~~~~i~~P~~~~~~~-~~~ 253 (335)
+. ++ .|+....-..... . ..+.-||.++...... ...|++||.+.+....+.+........ ...
T Consensus 62 d~-~G~~~W~~~~~~~~~~~-~----~~~~~dG~~lv~~~~~-------~~~v~~vd~~Gk~l~~~~~~~~~~~~~~~~~ 128 (276)
T 3no2_A 62 TR-DGRELWNIAAPAGCEMQ-T----ARILPDGNALVAWCGH-------PSTILEVNMKGEVLSKTEFETGIERPHAQFR 128 (276)
T ss_dssp CT-TSCEEEEEECCTTCEEE-E----EEECTTSCEEEEEEST-------TEEEEEECTTSCEEEEEEECCSCSSGGGSCS
T ss_pred CC-CCCEEEEEcCCCCcccc-c----cEECCCCCEEEEecCC-------CCEEEEEeCCCCEEEEEeccCCCCccccccc
Confidence 76 33 3664431101111 1 2445567665544321 236788887655433343322211000 011
Q ss_pred eEEEEeCCeEEEEEecCCCCEEEEEEECCCCceeEEEEeccCCceeeeEEEeeCCEEEEEe-cCCeEEEEeCCCCce
Q 045559 254 TVFGLYNDSLSFLVFDERESCFDIWTMKERYHWTKEFSTTPILAVDAPIGFWKNDTFFIRS-NTEELLLYDPNSEEI 329 (335)
Q Consensus 254 ~~l~~~~g~L~~~~~~~~~~~~~IW~l~~~~~W~~~~~i~~~~~~~~~~~~~~~~~il~~~-~~~~l~~yd~~~~~~ 329 (335)
..-...+|.+.+.... ...+.+|-.+.+..|.. .. +-. ..-..+..+|++++.. ...+|+.+|++|+++
T Consensus 129 ~v~~~~~G~~lv~~~~--~~~v~~~d~~G~~~w~~--~~-~~~--~~~~~~~~~g~~~v~~~~~~~v~~~d~~tG~~ 198 (276)
T 3no2_A 129 QINKNKKGNYLVPLFA--TSEVREIAPNGQLLNSV--KL-SGT--PFSSAFLDNGDCLVACGDAHCFVQLNLESNRI 198 (276)
T ss_dssp CCEECTTSCEEEEETT--TTEEEEECTTSCEEEEE--EC-SSC--CCEEEECTTSCEEEECBTTSEEEEECTTTCCE
T ss_pred CceECCCCCEEEEecC--CCEEEEECCCCCEEEEE--EC-CCC--ccceeEcCCCCEEEEeCCCCeEEEEeCcCCcE
Confidence 1112336665554443 44555554443344543 22 111 1112334577876654 455799999996554
No 66
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=84.98 E-value=15 Score=31.17 Aligned_cols=115 Identities=10% Similarity=0.079 Sum_probs=60.0
Q ss_pred ecceEEEEeecCCCCCccCceEEEEEECCccceeeecCCCccccCCCCeeEEEEe-CCeEEEEEecCCCCEEEEEEECC-
Q 045559 205 HNGACHWLVPFGAFHPLCCHYVILSFDMSDEVFEEILGPNCLLEISPKHTVFGLY-NDSLSFLVFDERESCFDIWTMKE- 282 (335)
Q Consensus 205 ~~G~~ywl~~~~~~~~~~~~~~i~~fD~~~e~~~~i~~P~~~~~~~~~~~~l~~~-~g~L~~~~~~~~~~~~~IW~l~~- 282 (335)
-+|.+||.... ...|..+|.++.++..+..+... .-..++.. +|+|.+.........-.|++++.
T Consensus 54 ~~g~l~~~~~~--------~~~i~~~d~~~~~~~~~~~~~~~-----~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~ 120 (333)
T 2dg1_A 54 RQGQLFLLDVF--------EGNIFKINPETKEIKRPFVSHKA-----NPAAIKIHKDGRLFVCYLGDFKSTGGIFAATEN 120 (333)
T ss_dssp TTSCEEEEETT--------TCEEEEECTTTCCEEEEEECSSS-----SEEEEEECTTSCEEEEECTTSSSCCEEEEECTT
T ss_pred CCCCEEEEECC--------CCEEEEEeCCCCcEEEEeeCCCC-----CcceEEECCCCcEEEEeCCCCCCCceEEEEeCC
Confidence 36788776543 33789999988877665311111 12234443 67777776542011123455554
Q ss_pred CCceeEEEEeccCCceeeeEEEeeCCEEEEEec-------CCeEEEEeCCCCceeec
Q 045559 283 RYHWTKEFSTTPILAVDAPIGFWKNDTFFIRSN-------TEELLLYDPNSEEIIDF 332 (335)
Q Consensus 283 ~~~W~~~~~i~~~~~~~~~~~~~~~~~il~~~~-------~~~l~~yd~~~~~~~~v 332 (335)
...-.....-........-+.+.++|++++... ...|+.+|+++++++.+
T Consensus 121 ~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~~ 177 (333)
T 2dg1_A 121 GDNLQDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPI 177 (333)
T ss_dssp SCSCEEEECSSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEEEE
T ss_pred CCEEEEEEccCccCCcccceEECCCCCEEEEeccccccCCCceEEEEeCCCCEEEEe
Confidence 222111111001111123344556788877654 25699999988776543
No 67
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=84.47 E-value=15 Score=29.90 Aligned_cols=183 Identities=11% Similarity=0.056 Sum_probs=94.4
Q ss_pred CceEEEEecchhhhhcCCCCcccCCcCCceeeeeEEeecCCCCCeEEEEEEEEecCccccccCCCceEEEEEcCC-Ccce
Q 045559 106 GDEIALYNHATRDLKFLPKLTLIDNLESIYTIMFGLGLDPKCNYYKLVYIVTYHDSELGKVLNDSRQVFIYSFSD-NSWR 184 (335)
Q Consensus 106 ~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~l~~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~~~vyss~~-~~W~ 184 (335)
...++++|+.+++...+...... ...+.+.|.. .+-++. . .-.+.+++..+ +...
T Consensus 21 ~~~i~~~d~~~~~~~~~~~~~~~---------v~~~~~spdg-~~l~~~--~------------~~~i~~~d~~~~~~~~ 76 (297)
T 2ojh_A 21 RSSIEIFNIRTRKMRVVWQTPEL---------FEAPNWSPDG-KYLLLN--S------------EGLLYRLSLAGDPSPE 76 (297)
T ss_dssp CEEEEEEETTTTEEEEEEEESSC---------CEEEEECTTS-SEEEEE--E------------TTEEEEEESSSCCSCE
T ss_pred ceeEEEEeCCCCceeeeccCCcc---------eEeeEECCCC-CEEEEE--c------------CCeEEEEeCCCCCCce
Confidence 56789999999887665443222 3466666643 333221 1 22688888888 7665
Q ss_pred ecCcccc-cccccCCCceeeeecceEEEEeecCCCCCccCceEEEEEECCccceeeecCCCccccCCCCeeEEEEe-CCe
Q 045559 185 NFQGFEF-GMYDLDEVLDCTYHNGACHWLVPFGAFHPLCCHYVILSFDMSDEVFEEILGPNCLLEISPKHTVFGLY-NDS 262 (335)
Q Consensus 185 ~~~~~p~-~~~~~~~~~~~v~~~G~~ywl~~~~~~~~~~~~~~i~~fD~~~e~~~~i~~P~~~~~~~~~~~~l~~~-~g~ 262 (335)
.+..... ..... ....-+|.....+....+. ...|..+|..+.....+..... ...+... +|+
T Consensus 77 ~~~~~~~~~~~~~----~~~spdg~~l~~~~~~~~~----~~~l~~~~~~~~~~~~~~~~~~-------~~~~~~spdg~ 141 (297)
T 2ojh_A 77 KVDTGFATICNND----HGISPDGALYAISDKVEFG----KSAIYLLPSTGGTPRLMTKNLP-------SYWHGWSPDGK 141 (297)
T ss_dssp ECCCTTCCCBCSC----CEECTTSSEEEEEECTTTS----SCEEEEEETTCCCCEECCSSSS-------EEEEEECTTSS
T ss_pred Eeccccccccccc----eEECCCCCEEEEEEeCCCC----cceEEEEECCCCceEEeecCCC-------ccceEECCCCC
Confidence 4432111 11111 1223355533333311111 4578888887766555433221 1122222 555
Q ss_pred -EEEEEecCCCCEEEEEEECC-CCceeEEEEeccCCceeeeEEEeeCCE-EEEEec---CCeEEEEeCCCCceeec
Q 045559 263 -LSFLVFDERESCFDIWTMKE-RYHWTKEFSTTPILAVDAPIGFWKNDT-FFIRSN---TEELLLYDPNSEEIIDF 332 (335)
Q Consensus 263 -L~~~~~~~~~~~~~IW~l~~-~~~W~~~~~i~~~~~~~~~~~~~~~~~-il~~~~---~~~l~~yd~~~~~~~~v 332 (335)
|++.... ...+.||.++. .... ..+........-+.+.++|+ +++... ...++.+++.+++.+.+
T Consensus 142 ~l~~~~~~--~~~~~l~~~~~~~~~~---~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~~~~~~~ 212 (297)
T 2ojh_A 142 SFTYCGIR--DQVFDIYSMDIDSGVE---TRLTHGEGRNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDGSSVERI 212 (297)
T ss_dssp EEEEEEEE--TTEEEEEEEETTTCCE---EECCCSSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCEEEC
T ss_pred EEEEEECC--CCceEEEEEECCCCcc---eEcccCCCccccceECCCCCEEEEEecCCCCccEEEECCCCCCcEEE
Confidence 5544444 46789999875 2322 12312222234445566777 444432 34577888777776655
No 68
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=84.39 E-value=18 Score=30.67 Aligned_cols=199 Identities=8% Similarity=-0.030 Sum_probs=97.7
Q ss_pred cceEEEee-cCceEEEEecchhhhh-cCCCCcccCCcCCc-eeeeeEEeecCCCCCeEEEEEEEEecCccccccCCCceE
Q 045559 97 EGLFIMFI-GGDEIALYNHATRDLK-FLPKLTLIDNLESI-YTIMFGLGLDPKCNYYKLVYIVTYHDSELGKVLNDSRQV 173 (335)
Q Consensus 97 ~GLl~~~~-~~~~~~V~NP~T~~~~-~LP~~~~~~~~~~~-~~~~~~l~~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~~ 173 (335)
++.+.+.. ....+.++|+.|++.. .++..... .+... .....++.+++..+ +-++.-. .....+
T Consensus 100 g~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~s~dg~-~l~~~~~-----------~~~~~i 166 (353)
T 3vgz_A 100 TQTLWFGNTVNSAVTAIDAKTGEVKGRLVLDDRK-RTEEVRPLQPRELVADDATN-TVYISGI-----------GKESVI 166 (353)
T ss_dssp TTEEEEEETTTTEEEEEETTTCCEEEEEESCCCC-CCSSCCCCEEEEEEEETTTT-EEEEEEE-----------SSSCEE
T ss_pred CCEEEEEecCCCEEEEEeCCCCeeEEEEecCCCc-cccccCCCCCceEEECCCCC-EEEEEec-----------CCCceE
Confidence 34454444 3578999999998764 33332111 00000 01135677777544 2222110 113457
Q ss_pred EEEEcCCCcceecCccc-ccccccCCCceeeeecceEEEEeecCCCCCccCceEEEEEECCccceee-ecCCCccccCCC
Q 045559 174 FIYSFSDNSWRNFQGFE-FGMYDLDEVLDCTYHNGACHWLVPFGAFHPLCCHYVILSFDMSDEVFEE-ILGPNCLLEISP 251 (335)
Q Consensus 174 ~vyss~~~~W~~~~~~p-~~~~~~~~~~~~v~~~G~~ywl~~~~~~~~~~~~~~i~~fD~~~e~~~~-i~~P~~~~~~~~ 251 (335)
.+++.+++.=. ...+ ....... ..+.-+|...+.+.. ...|..+|+.+.+... +..+..... .
T Consensus 167 ~~~d~~~~~~~--~~~~~~~~~~~~---~~~s~dg~~l~~~~~--------~~~i~~~d~~~~~~~~~~~~~~~~~~--~ 231 (353)
T 3vgz_A 167 WVVDGGNIKLK--TAIQNTGKMSTG---LALDSEGKRLYTTNA--------DGELITIDTADNKILSRKKLLDDGKE--H 231 (353)
T ss_dssp EEEETTTTEEE--EEECCCCTTCCC---CEEETTTTEEEEECT--------TSEEEEEETTTTEEEEEEECCCSSSC--C
T ss_pred EEEcCCCCceE--EEecCCCCccce---EEECCCCCEEEEEcC--------CCeEEEEECCCCeEEEEEEcCCCCCC--c
Confidence 88888765321 1111 1110010 123335653333332 2368889998776543 344222111 0
Q ss_pred CeeEEEEe-CCe-EEEEEecCCCCEEEEEEECCCCceeEEEEeccCCceeeeEEEeeCCE-EEEEe-cCCeEEEEeCCCC
Q 045559 252 KHTVFGLY-NDS-LSFLVFDERESCFDIWTMKERYHWTKEFSTTPILAVDAPIGFWKNDT-FFIRS-NTEELLLYDPNSE 327 (335)
Q Consensus 252 ~~~~l~~~-~g~-L~~~~~~~~~~~~~IW~l~~~~~W~~~~~i~~~~~~~~~~~~~~~~~-il~~~-~~~~l~~yd~~~~ 327 (335)
....++.. +|+ |++.... ...+.+|-++. .+-.. .+ +...- .-+.+.++|+ +++.. .++.+.+||++++
T Consensus 232 ~~~~~~~s~dg~~l~~~~~~--~~~v~~~d~~~-~~~~~--~~-~~~~~-~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~ 304 (353)
T 3vgz_A 232 FFINISLDTARQRAFITDSK--AAEVLVVDTRN-GNILA--KV-AAPES-LAVLFNPARNEAYVTHRQAGKVSVIDAKSY 304 (353)
T ss_dssp CEEEEEEETTTTEEEEEESS--SSEEEEEETTT-CCEEE--EE-ECSSC-CCEEEETTTTEEEEEETTTTEEEEEETTTT
T ss_pred ccceEEECCCCCEEEEEeCC--CCEEEEEECCC-CcEEE--EE-EcCCC-ceEEECCCCCEEEEEECCCCeEEEEECCCC
Confidence 12223433 455 6555543 57788887765 43333 33 22221 2355667777 55554 4678999999887
Q ss_pred cee
Q 045559 328 EII 330 (335)
Q Consensus 328 ~~~ 330 (335)
+..
T Consensus 305 ~~~ 307 (353)
T 3vgz_A 305 KVV 307 (353)
T ss_dssp EEE
T ss_pred eEE
Confidence 764
No 69
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=83.90 E-value=17 Score=29.93 Aligned_cols=191 Identities=8% Similarity=0.014 Sum_probs=95.0
Q ss_pred ccceEEEee-cCceEEEEecchhhhhcCCCCcccCCcCCceeeeeEEeecCCCCCeEEEEEEEEecCccccccCCCceEE
Q 045559 96 FEGLFIMFI-GGDEIALYNHATRDLKFLPKLTLIDNLESIYTIMFGLGLDPKCNYYKLVYIVTYHDSELGKVLNDSRQVF 174 (335)
Q Consensus 96 ~~GLl~~~~-~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~l~~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~~~ 174 (335)
.+|.|.+.. ....+.++++.++....+-.... ....++.+|+..+... .. . .....+.
T Consensus 46 ~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~--------~~p~~ia~d~~~~~ly--v~-d----------~~~~~I~ 104 (267)
T 1npe_A 46 VDKVVYWTDISEPSIGRASLHGGEPTTIIRQDL--------GSPEGIALDHLGRTIF--WT-D----------SQLDRIE 104 (267)
T ss_dssp TTTEEEEEETTTTEEEEEESSSCCCEEEECTTC--------CCEEEEEEETTTTEEE--EE-E----------TTTTEEE
T ss_pred CCCEEEEEECCCCEEEEEecCCCCcEEEEECCC--------CCccEEEEEecCCeEE--EE-E----------CCCCEEE
Confidence 456665555 35678888887665332211111 1135777787544322 11 1 1234677
Q ss_pred EEEcCCCcceecCcccccccccCCCceeeee---cceEEEEeecCCCCCccCceEEEEEECCccceeee-cCCCccccCC
Q 045559 175 IYSFSDNSWRNFQGFEFGMYDLDEVLDCTYH---NGACHWLVPFGAFHPLCCHYVILSFDMSDEVFEEI-LGPNCLLEIS 250 (335)
Q Consensus 175 vyss~~~~W~~~~~~p~~~~~~~~~~~~v~~---~G~~ywl~~~~~~~~~~~~~~i~~fD~~~e~~~~i-~~P~~~~~~~ 250 (335)
+++..+..-+.+. +... ..+ .++.+ +|.+||...... ...|.++++.......+ ..+. .
T Consensus 105 ~~~~~g~~~~~~~--~~~~-~~P---~~i~vd~~~g~lyv~~~~~~------~~~I~~~~~dg~~~~~~~~~~~--~--- 167 (267)
T 1npe_A 105 VAKMDGTQRRVLF--DTGL-VNP---RGIVTDPVRGNLYWTDWNRD------NPKIETSHMDGTNRRILAQDNL--G--- 167 (267)
T ss_dssp EEETTSCSCEEEE--CSSC-SSE---EEEEEETTTTEEEEEECCSS------SCEEEEEETTSCCCEEEECTTC--S---
T ss_pred EEEcCCCCEEEEE--ECCC-CCc---cEEEEeeCCCEEEEEECCCC------CcEEEEEecCCCCcEEEEECCC--C---
Confidence 7777543322221 1111 111 23333 588999765321 24788888865544333 2111 1
Q ss_pred CCeeEEEEe--CCeEEEEEecCCCCEEEEEEECCCCceeEEEEeccCCceeeeEEEee-CCEEEEEe-cCCeEEEEeCCC
Q 045559 251 PKHTVFGLY--NDSLSFLVFDERESCFDIWTMKERYHWTKEFSTTPILAVDAPIGFWK-NDTFFIRS-NTEELLLYDPNS 326 (335)
Q Consensus 251 ~~~~~l~~~--~g~L~~~~~~~~~~~~~IW~l~~~~~W~~~~~i~~~~~~~~~~~~~~-~~~il~~~-~~~~l~~yd~~~ 326 (335)
....++.. ++.|++.... .+.+.+.-++. . .....+ + ....|.++.. ++.+++.. ..+++..+|+++
T Consensus 168 -~P~gia~d~~~~~lyv~d~~--~~~I~~~~~~g--~-~~~~~~-~--~~~~P~gi~~d~~~lyva~~~~~~v~~~d~~~ 238 (267)
T 1npe_A 168 -LPNGLTFDAFSSQLCWVDAG--THRAECLNPAQ--P-GRRKVL-E--GLQYPFAVTSYGKNLYYTDWKTNSVIAMDLAI 238 (267)
T ss_dssp -CEEEEEEETTTTEEEEEETT--TTEEEEEETTE--E-EEEEEE-E--CCCSEEEEEEETTEEEEEETTTTEEEEEETTT
T ss_pred -CCcEEEEcCCCCEEEEEECC--CCEEEEEecCC--C-ceEEEe-c--CCCCceEEEEeCCEEEEEECCCCeEEEEeCCC
Confidence 12234443 4568888765 45544443332 1 111112 1 2345666654 45566655 357899999997
Q ss_pred Cce-eecc
Q 045559 327 EEI-IDFQ 333 (335)
Q Consensus 327 ~~~-~~v~ 333 (335)
++. ++|.
T Consensus 239 g~~~~~i~ 246 (267)
T 1npe_A 239 SKEMDTFH 246 (267)
T ss_dssp TEEEEEEC
T ss_pred CCceEEEc
Confidence 664 4443
No 70
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=83.75 E-value=18 Score=30.15 Aligned_cols=202 Identities=8% Similarity=-0.090 Sum_probs=93.0
Q ss_pred cccceEEEeec-CceEEEEecchhhhhcCCCCcccCCcCCceeeeeEEeecCCCCCeEEEEEEEEecCc------ccccc
Q 045559 95 PFEGLFIMFIG-GDEIALYNHATRDLKFLPKLTLIDNLESIYTIMFGLGLDPKCNYYKLVYIVTYHDSE------LGKVL 167 (335)
Q Consensus 95 s~~GLl~~~~~-~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~l~~d~~~~~ykVv~~~~~~~~~------~~~~~ 167 (335)
+.+|-+.+... ...+.++||.|++...+...... . .......+.+|+.. ..-+.-. .+... .....
T Consensus 77 ~~dg~l~v~~~~~~~i~~~d~~~g~~~~~~~~~~~-~---~~~~~~~i~~d~~G-~l~vtd~--~~g~~~~~~~~~~~~~ 149 (296)
T 3e5z_A 77 NKQGHLIACSHGLRRLERQREPGGEWESIADSFEG-K---KLNSPNDVCLAPDG-SLWFSDP--TYGIDKPEEGYGGEME 149 (296)
T ss_dssp CTTCCEEEEETTTTEEEEECSTTCCEEEEECEETT-E---ECCCCCCEEECTTS-CEEEEEC--SHHHHCGGGSSCCCCC
T ss_pred CCCCcEEEEecCCCeEEEEcCCCCcEEEEeeccCC-C---CCCCCCCEEECCCC-CEEEECC--cccccccccccccccc
Confidence 45676665553 46899999999987766432211 0 00112345667643 3222100 00000 00000
Q ss_pred CCCceEEEEEcCCCcceecCcccccccccCCCceeee--ecceEEEEeecCCCCCccCceEEEEEECC-ccce-eee-cC
Q 045559 168 NDSRQVFIYSFSDNSWRNFQGFEFGMYDLDEVLDCTY--HNGACHWLVPFGAFHPLCCHYVILSFDMS-DEVF-EEI-LG 242 (335)
Q Consensus 168 ~~~~~~~vyss~~~~W~~~~~~p~~~~~~~~~~~~v~--~~G~~ywl~~~~~~~~~~~~~~i~~fD~~-~e~~-~~i-~~ 242 (335)
...-.+..++.. +.-+.... ... .+ .++. -+|.++ ++... ...|..||+. +... ... .+
T Consensus 150 ~~~~~l~~~~~~-g~~~~~~~---~~~-~~---~gi~~s~dg~~l-v~~~~-------~~~i~~~~~~~~g~~~~~~~~~ 213 (296)
T 3e5z_A 150 LPGRWVFRLAPD-GTLSAPIR---DRV-KP---NGLAFLPSGNLL-VSDTG-------DNATHRYCLNARGETEYQGVHF 213 (296)
T ss_dssp SSSCEEEEECTT-SCEEEEEC---CCS-SE---EEEEECTTSCEE-EEETT-------TTEEEEEEECSSSCEEEEEEEE
T ss_pred CCCcEEEEECCC-CCEEEeec---CCC-CC---ccEEECCCCCEE-EEeCC-------CCeEEEEEECCCCcCcCCCeEe
Confidence 112244555544 33332210 000 11 1333 357766 44433 3478888876 3444 111 11
Q ss_pred CCccccCCCCeeEEE-EeCCeEEEEEecCCCCEEEEEEECCCCceeEEEEeccCCceeeeEEE-eeCCEEEEEecCCeEE
Q 045559 243 PNCLLEISPKHTVFG-LYNDSLSFLVFDERESCFDIWTMKERYHWTKEFSTTPILAVDAPIGF-WKNDTFFIRSNTEELL 320 (335)
Q Consensus 243 P~~~~~~~~~~~~l~-~~~g~L~~~~~~~~~~~~~IW~l~~~~~W~~~~~i~~~~~~~~~~~~-~~~~~il~~~~~~~l~ 320 (335)
...... .. .++ ..+|+|++.. . ..+.+|-.+ ..-...... +-. ..-+.+ .++++.++......++
T Consensus 214 ~~~~~~---p~-~i~~d~~G~l~v~~-~---~~v~~~~~~--g~~~~~~~~-~~~--~~~~~f~~~d~~~L~v~t~~~l~ 280 (296)
T 3e5z_A 214 TVEPGK---TD-GLRVDAGGLIWASA-G---DGVHVLTPD--GDELGRVLT-PQT--TSNLCFGGPEGRTLYMTVSTEFW 280 (296)
T ss_dssp CCSSSC---CC-SEEEBTTSCEEEEE-T---TEEEEECTT--SCEEEEEEC-SSC--CCEEEEESTTSCEEEEEETTEEE
T ss_pred eCCCCC---CC-eEEECCCCCEEEEc-C---CeEEEECCC--CCEEEEEEC-CCC--ceeEEEECCCCCEEEEEcCCeEE
Confidence 111110 11 233 3477787777 2 455555443 333333333 322 333344 3466655555556899
Q ss_pred EEeCCCCceeec
Q 045559 321 LYDPNSEEIIDF 332 (335)
Q Consensus 321 ~yd~~~~~~~~v 332 (335)
.++++++++++-
T Consensus 281 ~~~~~~~~~~~~ 292 (296)
T 3e5z_A 281 SIETNVRGLEHH 292 (296)
T ss_dssp EEECSCCBCCC-
T ss_pred EEEccccccccc
Confidence 999999998764
No 71
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=83.52 E-value=22 Score=31.12 Aligned_cols=188 Identities=9% Similarity=0.014 Sum_probs=95.0
Q ss_pred cceEEEeecCceEEEEecchhhhhcCCCCcccCCcCCceeeeeEEeecCCCCCeEEEEEEEEecCccccccCCCceEEEE
Q 045559 97 EGLFIMFIGGDEIALYNHATRDLKFLPKLTLIDNLESIYTIMFGLGLDPKCNYYKLVYIVTYHDSELGKVLNDSRQVFIY 176 (335)
Q Consensus 97 ~GLl~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~l~~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~~~vy 176 (335)
+.++... ....+.|||..|++...+...... .....+.+.+. +.+-++.. ..-.+.+|
T Consensus 104 ~~l~~~~-~d~~v~lw~~~~~~~~~~~~~~~~-------~~v~~v~~s~~-~~~l~~~~-------------~dg~i~iw 161 (401)
T 4aez_A 104 LNVVAVA-LERNVYVWNADSGSVSALAETDES-------TYVASVKWSHD-GSFLSVGL-------------GNGLVDIY 161 (401)
T ss_dssp TSEEEEE-ETTEEEEEETTTCCEEEEEECCTT-------CCEEEEEECTT-SSEEEEEE-------------TTSCEEEE
T ss_pred CCEEEEE-CCCeEEEeeCCCCcEeEeeecCCC-------CCEEEEEECCC-CCEEEEEC-------------CCCeEEEE
Confidence 4444444 488999999999886654433211 11456666663 33332221 12357888
Q ss_pred EcCCCcceecCcccccccccCCCceeeeecceEEEEeecCCCCCccCceEEEEEECCccceeeecCCCccccCCCCeeEE
Q 045559 177 SFSDNSWRNFQGFEFGMYDLDEVLDCTYHNGACHWLVPFGAFHPLCCHYVILSFDMSDEVFEEILGPNCLLEISPKHTVF 256 (335)
Q Consensus 177 ss~~~~W~~~~~~p~~~~~~~~~~~~v~~~G~~ywl~~~~~~~~~~~~~~i~~fD~~~e~~~~i~~P~~~~~~~~~~~~l 256 (335)
+.+++.-... +...... -..+..+|.+...+.. ...|..+|+....-....+..... .-..+
T Consensus 162 d~~~~~~~~~--~~~~~~~----v~~~~~~~~~l~~~~~--------dg~i~i~d~~~~~~~~~~~~~~~~----~v~~~ 223 (401)
T 4aez_A 162 DVESQTKLRT--MAGHQAR----VGCLSWNRHVLSSGSR--------SGAIHHHDVRIANHQIGTLQGHSS----EVCGL 223 (401)
T ss_dssp ETTTCCEEEE--ECCCSSC----EEEEEEETTEEEEEET--------TSEEEEEETTSSSCEEEEEECCSS----CEEEE
T ss_pred ECcCCeEEEE--ecCCCCc----eEEEEECCCEEEEEcC--------CCCEEEEecccCcceeeEEcCCCC----CeeEE
Confidence 8877643211 0000000 1234446654444433 347888888743221111111111 11223
Q ss_pred EEe-CCeEEEEEecCCCCEEEEEEECCCCceeEEEEeccCCceeeeEEEeeCCE-EEEEe---cCCeEEEEeCCCCce
Q 045559 257 GLY-NDSLSFLVFDERESCFDIWTMKERYHWTKEFSTTPILAVDAPIGFWKNDT-FFIRS---NTEELLLYDPNSEEI 329 (335)
Q Consensus 257 ~~~-~g~L~~~~~~~~~~~~~IW~l~~~~~W~~~~~i~~~~~~~~~~~~~~~~~-il~~~---~~~~l~~yd~~~~~~ 329 (335)
... +|.+.+.+.. .+.+.||-+.. . .....+........-+.+.+++. ++... .++.+..||+++++.
T Consensus 224 ~~~~~~~~l~s~~~--d~~v~iwd~~~-~--~~~~~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~~ 296 (401)
T 4aez_A 224 AWRSDGLQLASGGN--DNVVQIWDARS-S--IPKFTKTNHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATGAR 296 (401)
T ss_dssp EECTTSSEEEEEET--TSCEEEEETTC-S--SEEEEECCCSSCCCEEEECTTSTTEEEEECCTTTCEEEEEETTTCCE
T ss_pred EEcCCCCEEEEEeC--CCeEEEccCCC-C--CccEEecCCcceEEEEEECCCCCCEEEEecCCCCCEEEEEECCCCCE
Confidence 333 5555455444 46899998876 2 23333422333344455566554 55543 367899999887654
No 72
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=82.77 E-value=20 Score=31.05 Aligned_cols=196 Identities=11% Similarity=0.033 Sum_probs=87.7
Q ss_pred ceEEEEecchhhhhcCCCCcccCCcCCceeeeeEEeecCCCCCeEEEEEEEEecCccccccCCCceEEEEEcCCCcceec
Q 045559 107 DEIALYNHATRDLKFLPKLTLIDNLESIYTIMFGLGLDPKCNYYKLVYIVTYHDSELGKVLNDSRQVFIYSFSDNSWRNF 186 (335)
Q Consensus 107 ~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~l~~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~~~vyss~~~~W~~~ 186 (335)
..++++|..|++.+.+...... .....+.|..+. +++.... .. .......+.+++..++..+.+
T Consensus 168 ~~l~~~d~~~g~~~~l~~~~~~---------~~~~~~sp~dg~-~l~~~~~--~~----~~~~~~~l~~~d~~~~~~~~l 231 (388)
T 3pe7_A 168 CRLMRVDLKTGESTVILQENQW---------LGHPIYRPYDDS-TVAFCHE--GP----HDLVDARMWLINEDGTNMRKV 231 (388)
T ss_dssp EEEEEEETTTCCEEEEEEESSC---------EEEEEEETTEEE-EEEEEEC--SC----TTTSSCSEEEEETTSCCCEES
T ss_pred ceEEEEECCCCceEEeecCCcc---------ccccEECCCCCC-EEEEEEe--cC----CCCCcceEEEEeCCCCceEEe
Confidence 5688889888876665432221 234455551122 2222211 10 012245677888777665555
Q ss_pred Cccccc-ccccCCCceeeeecce-EEEEeecCCCCCccCceEEEEEECCccceeee-cCCCcccc-CCCCeeEEEEeCCe
Q 045559 187 QGFEFG-MYDLDEVLDCTYHNGA-CHWLVPFGAFHPLCCHYVILSFDMSDEVFEEI-LGPNCLLE-ISPKHTVFGLYNDS 262 (335)
Q Consensus 187 ~~~p~~-~~~~~~~~~~v~~~G~-~ywl~~~~~~~~~~~~~~i~~fD~~~e~~~~i-~~P~~~~~-~~~~~~~l~~~~g~ 262 (335)
...... ....+ ...-+|. +++........ ...|..+|+++.+...+ ..|..... ...... ...-+|+
T Consensus 232 ~~~~~~~~~~~~----~~spdg~~l~~~~~~~~~~----~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~-~~spdg~ 302 (388)
T 3pe7_A 232 KTHAEGESCTHE----FWVPDGSALVYVSYLKGSP----DRFIYSADPETLENRQLTSMPACSHLMSNYDGS-LMVGDGS 302 (388)
T ss_dssp CCCCTTEEEEEE----EECTTSSCEEEEEEETTCC----CEEEEEECTTTCCEEEEEEECCEEEEEECTTSS-EEEEEEC
T ss_pred eeCCCCcccccc----eECCCCCEEEEEecCCCCC----cceEEEEecCCCceEEEEcCCCceeeeecCCCC-eEccCCC
Confidence 321110 01010 2223565 65655443210 23589999988776655 44431100 000011 1233444
Q ss_pred -EEEEEec------CCCCEEEEEEECCCCceeEEEEeccCCc---------eeeeEEEeeCCE-EEEEec---CCeEEEE
Q 045559 263 -LSFLVFD------ERESCFDIWTMKERYHWTKEFSTTPILA---------VDAPIGFWKNDT-FFIRSN---TEELLLY 322 (335)
Q Consensus 263 -L~~~~~~------~~~~~~~IW~l~~~~~W~~~~~i~~~~~---------~~~~~~~~~~~~-il~~~~---~~~l~~y 322 (335)
|++.... .....+.+|-++. ..-.++..- +... ...-..+.+||+ |++... ...|+.+
T Consensus 303 ~l~~~~~~~~~~~~~~~~~i~~~d~~~-~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~spDg~~l~~~s~~~g~~~l~~~ 380 (388)
T 3pe7_A 303 DAPVDVQDDSGYKIENDPFLYVFNMKN-GTQHRVARH-DTSWKVFEGDRQVTHPHPSFTPDDKQILFTSDVHGKPALYLA 380 (388)
T ss_dssp CC------------CCCCEEEEEETTT-TEEEEEEEC-CCCCCCBTTBSSTTCCCCEECTTSSEEEEEECTTSSCEEEEE
T ss_pred cceeEeeeccccccCCCCEEEEEeccC-CceEEeccc-cCcccccccccccCCCCccCCCCCCEEEEEecCCCceeEEEE
Confidence 4443321 1234555555554 332221111 1100 122234567876 555543 3469999
Q ss_pred eCCCCce
Q 045559 323 DPNSEEI 329 (335)
Q Consensus 323 d~~~~~~ 329 (335)
|+.++.+
T Consensus 381 ~l~~~~~ 387 (388)
T 3pe7_A 381 TLPESVW 387 (388)
T ss_dssp ECCGGGG
T ss_pred ECChhcc
Confidence 9987765
No 73
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=82.57 E-value=25 Score=31.05 Aligned_cols=103 Identities=11% Similarity=0.022 Sum_probs=55.8
Q ss_pred cceEEEEeecCCCCCccCceEEEEEECCccceeeecCCCccccCCCCeeEEEE--eCCeEEEEEecCCCCEEEEEEECCC
Q 045559 206 NGACHWLVPFGAFHPLCCHYVILSFDMSDEVFEEILGPNCLLEISPKHTVFGL--YNDSLSFLVFDERESCFDIWTMKER 283 (335)
Q Consensus 206 ~G~~ywl~~~~~~~~~~~~~~i~~fD~~~e~~~~i~~P~~~~~~~~~~~~l~~--~~g~L~~~~~~~~~~~~~IW~l~~~ 283 (335)
+|.+||..... ...|.++|+....-..+-. .... ....|+. .+|.|+++... ... |++.+-.
T Consensus 213 ~g~ly~td~~~-------~~~I~r~~~dG~~~~~~~~-~~~~----~PnGlavd~~~~~lY~aD~~--~~~--I~~~d~d 276 (386)
T 3v65_B 213 EGTIYWTDWGN-------TPRIEASSMDGSGRRIIAD-THLF----WPNGLTIDYAGRRMYWVDAK--HHV--IERANLD 276 (386)
T ss_dssp TTEEEEEECSS-------SCEEEEEETTSCSCEEEEC-SSCS----CEEEEEEEGGGTEEEEEETT--TTE--EEEECTT
T ss_pred CCeEEEeccCC-------CCEEEEEeCCCCCcEEEEE-CCCC----CeeeEEEeCCCCEEEEEECC--CCE--EEEEeCC
Confidence 58999987543 2579999987654433311 1111 1223444 47789988765 344 5555541
Q ss_pred CceeEEEEeccCCceeeeEEEe-eCCEEEEEe-cCCeEEEEeCCCC
Q 045559 284 YHWTKEFSTTPILAVDAPIGFW-KNDTFFIRS-NTEELLLYDPNSE 327 (335)
Q Consensus 284 ~~W~~~~~i~~~~~~~~~~~~~-~~~~il~~~-~~~~l~~yd~~~~ 327 (335)
..=.+ .+ -...+..|.++. .++.++... ..++|..+|..++
T Consensus 277 G~~~~--~~-~~~~~~~P~giav~~~~ly~td~~~~~V~~~~~~~G 319 (386)
T 3v65_B 277 GSHRK--AV-ISQGLPHPFAITVFEDSLYWTDWHTKSINSANKFTG 319 (386)
T ss_dssp SCSCE--EE-ECSSCSSEEEEEEETTEEEEEETTTTEEEEEETTTC
T ss_pred CCeeE--EE-EECCCCCceEEEEECCEEEEeeCCCCeEEEEECCCC
Confidence 11111 12 112244666654 355666654 4678999995443
No 74
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=82.43 E-value=21 Score=29.92 Aligned_cols=91 Identities=8% Similarity=0.031 Sum_probs=51.4
Q ss_pred EEEEEECCccceeeecCCCccccCCCCeeEEEEe-CCe-EEEEEecCCCCEEEEEEECCCCceeEEEEeccCCceeeeEE
Q 045559 226 VILSFDMSDEVFEEILGPNCLLEISPKHTVFGLY-NDS-LSFLVFDERESCFDIWTMKERYHWTKEFSTTPILAVDAPIG 303 (335)
Q Consensus 226 ~i~~fD~~~e~~~~i~~P~~~~~~~~~~~~l~~~-~g~-L~~~~~~~~~~~~~IW~l~~~~~W~~~~~i~~~~~~~~~~~ 303 (335)
.|..+|+.+.+...+..++... ....+... +|+ |++. ...+.+|-++. . .....+ +......-+.
T Consensus 220 ~v~~~d~~~~~~~~~~~~~~~~----~~~~~~~s~dg~~l~~~-----~~~v~~~d~~~-~--~~~~~~-~~~~~~~~~~ 286 (337)
T 1pby_B 220 GLLTMDLETGEMAMREVRIMDV----FYFSTAVNPAKTRAFGA-----YNVLESFDLEK-N--ASIKRV-PLPHSYYSVN 286 (337)
T ss_dssp EEEEEETTTCCEEEEEEEECSS----CEEEEEECTTSSEEEEE-----ESEEEEEETTT-T--EEEEEE-ECSSCCCEEE
T ss_pred ceEEEeCCCCCceEeecCCCCC----ceeeEEECCCCCEEEEe-----CCeEEEEECCC-C--cCccee-cCCCceeeEE
Confidence 6889999887765443332211 11123322 454 4443 25677777664 2 333444 3333334456
Q ss_pred EeeCCE-EEEEecCCeEEEEeCCCCce
Q 045559 304 FWKNDT-FFIRSNTEELLLYDPNSEEI 329 (335)
Q Consensus 304 ~~~~~~-il~~~~~~~l~~yd~~~~~~ 329 (335)
+.++|+ +++...++.+..||+++++.
T Consensus 287 ~s~dg~~l~~~~~~~~i~v~d~~~~~~ 313 (337)
T 1pby_B 287 VSTDGSTVWLGGALGDLAAYDAETLEK 313 (337)
T ss_dssp ECTTSCEEEEESBSSEEEEEETTTCCE
T ss_pred ECCCCCEEEEEcCCCcEEEEECcCCcE
Confidence 677777 45555567899999988764
No 75
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=82.06 E-value=20 Score=29.48 Aligned_cols=190 Identities=12% Similarity=0.020 Sum_probs=94.2
Q ss_pred cccceEEEeec-CceEEEEecchhhhhcCCCCcccCCcCCceeeeeEEeecCCCCCeEEEEEEEEecCccccccCCCceE
Q 045559 95 PFEGLFIMFIG-GDEIALYNHATRDLKFLPKLTLIDNLESIYTIMFGLGLDPKCNYYKLVYIVTYHDSELGKVLNDSRQV 173 (335)
Q Consensus 95 s~~GLl~~~~~-~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~l~~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~~ 173 (335)
..+|-+.+... ...++++||. ++...+..+... ....++.+|+.. . +. +.. .....+
T Consensus 65 ~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~-------~~~~~i~~~~~g-~--l~-v~~----------~~~~~i 122 (299)
T 2z2n_A 65 SSDGEVWFTENAANKIGRITKK-GIIKEYTLPNPD-------SAPYGITEGPNG-D--IW-FTE----------MNGNRI 122 (299)
T ss_dssp CTTSCEEEEETTTTEEEEECTT-SCEEEEECSSTT-------CCEEEEEECTTS-C--EE-EEE----------TTTTEE
T ss_pred CCCCCEEEeCCCCCeEEEECCC-CcEEEEeCCCcC-------CCceeeEECCCC-C--EE-EEe----------cCCceE
Confidence 34666666653 5678899986 444333321111 113566677643 2 21 111 112345
Q ss_pred EEEEcCCCcceecCcccccccccCCCceeeee--cceEEEEeecCCCCCccCceEEEEEECCccceeeecCCCccccCCC
Q 045559 174 FIYSFSDNSWRNFQGFEFGMYDLDEVLDCTYH--NGACHWLVPFGAFHPLCCHYVILSFDMSDEVFEEILGPNCLLEISP 251 (335)
Q Consensus 174 ~vyss~~~~W~~~~~~p~~~~~~~~~~~~v~~--~G~~ywl~~~~~~~~~~~~~~i~~fD~~~e~~~~i~~P~~~~~~~~ 251 (335)
.+++. ++....... +.. ...+ .++.. +|.+|+.... ...|..+|. +.++..+..|....
T Consensus 123 ~~~d~-~g~~~~~~~-~~~-~~~~---~~i~~~~~g~l~v~~~~--------~~~i~~~~~-~g~~~~~~~~~~~~---- 183 (299)
T 2z2n_A 123 GRITD-DGKIREYEL-PNK-GSYP---SFITLGSDNALWFTENQ--------NNAIGRITE-SGDITEFKIPTPAS---- 183 (299)
T ss_dssp EEECT-TCCEEEEEC-SST-TCCE---EEEEECTTSCEEEEETT--------TTEEEEECT-TCCEEEEECSSTTC----
T ss_pred EEECC-CCCEEEecC-CCC-CCCC---ceEEEcCCCCEEEEeCC--------CCEEEEEcC-CCcEEEeeCCCCCC----
Confidence 66665 444433211 111 0111 13333 5777654432 347899999 66666665553221
Q ss_pred CeeEEEEe-CCeEEEEEecCCCCEEEEEEECCCCceeEEEEeccCC-ceeeeEEEeeCCEEEEEe-cCCeEEEEeCCCCc
Q 045559 252 KHTVFGLY-NDSLSFLVFDERESCFDIWTMKERYHWTKEFSTTPIL-AVDAPIGFWKNDTFFIRS-NTEELLLYDPNSEE 328 (335)
Q Consensus 252 ~~~~l~~~-~g~L~~~~~~~~~~~~~IW~l~~~~~W~~~~~i~~~~-~~~~~~~~~~~~~il~~~-~~~~l~~yd~~~~~ 328 (335)
....++.. +|.|++.... ...+.+|-. . .... .+.. +.. ....-+.+.++|.+++.. ..+.|..||+ +++
T Consensus 184 ~~~~i~~~~~g~l~v~~~~--~~~i~~~~~-~-g~~~-~~~~-~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~ 256 (299)
T 2z2n_A 184 GPVGITKGNDDALWFVEII--GNKIGRITT-S-GEIT-EFKI-PTPNARPHAITAGAGIDLWFTEWGANKIGRLTS-NNI 256 (299)
T ss_dssp CEEEEEECTTSSEEEEETT--TTEEEEECT-T-CCEE-EEEC-SSTTCCEEEEEECSTTCEEEEETTTTEEEEEET-TTE
T ss_pred cceeEEECCCCCEEEEccC--CceEEEECC-C-CcEE-EEEC-CCCCCCceeEEECCCCCEEEeccCCceEEEECC-CCc
Confidence 12234443 5778777654 345555544 2 3332 2223 211 123334445578887776 4578999999 456
Q ss_pred eeec
Q 045559 329 IIDF 332 (335)
Q Consensus 329 ~~~v 332 (335)
++.+
T Consensus 257 ~~~~ 260 (299)
T 2z2n_A 257 IEEY 260 (299)
T ss_dssp EEEE
T ss_pred eEEE
Confidence 6554
No 76
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=81.87 E-value=25 Score=30.43 Aligned_cols=198 Identities=10% Similarity=0.011 Sum_probs=94.1
Q ss_pred cccceEEEeecCceEEEEecchhhhhcCCCCcccCCcCCceeeeeEEeecCCCCCeEEEEEEEEecCccccccCCCceEE
Q 045559 95 PFEGLFIMFIGGDEIALYNHATRDLKFLPKLTLIDNLESIYTIMFGLGLDPKCNYYKLVYIVTYHDSELGKVLNDSRQVF 174 (335)
Q Consensus 95 s~~GLl~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~l~~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~~~ 174 (335)
+-++.++.......+.|||..|++...........+. .....+.+.|.. .+- +... ..-.+.
T Consensus 91 s~d~~l~~~s~dg~v~lWd~~~~~~~~~~~~~~~~H~----~~V~~v~~spdg-~~l-~sgs------------~d~~i~ 152 (344)
T 4gqb_B 91 VGERGILVASDSGAVELWELDENETLIVSKFCKYEHD----DIVSTVSVLSSG-TQA-VSGS------------KDICIK 152 (344)
T ss_dssp ETTTEEEEEETTSEEEEEEECTTSSCEEEEEEEECCS----SCEEEEEECTTS-SEE-EEEE------------TTSCEE
T ss_pred eCCCeEEEEECCCEEEEEeccCCCceeEeeccccCCC----CCEEEEEECCCC-CEE-EEEe------------CCCeEE
Confidence 3456666666678899999999876544332221000 113456666643 332 2221 123578
Q ss_pred EEEcCCCcce-ecCcccccccccCCCceeeeecceEEEEeecCCCCCccCceEEEEEECCccceee-ecCCCccccCCCC
Q 045559 175 IYSFSDNSWR-NFQGFEFGMYDLDEVLDCTYHNGACHWLVPFGAFHPLCCHYVILSFDMSDEVFEE-ILGPNCLLEISPK 252 (335)
Q Consensus 175 vyss~~~~W~-~~~~~p~~~~~~~~~~~~v~~~G~~ywl~~~~~~~~~~~~~~i~~fD~~~e~~~~-i~~P~~~~~~~~~ 252 (335)
+++.+++.=. ......-.+.. ....-+|.-+.++... ...|..+|+.+.+... +..+.... .
T Consensus 153 iwd~~~~~~~~~~~~h~~~V~~-----~~~~~~~~~~l~s~s~-------D~~v~iwd~~~~~~~~~~~~~~~~~----~ 216 (344)
T 4gqb_B 153 VWDLAQQVVLSSYRAHAAQVTC-----VAASPHKDSVFLSCSE-------DNRILLWDTRCPKPASQIGCSAPGY----L 216 (344)
T ss_dssp EEETTTTEEEEEECCCSSCEEE-----EEECSSCTTEEEEEET-------TSCEEEEETTSSSCEEECC----CC----C
T ss_pred EEECCCCcEEEEEcCcCCceEE-----EEecCCCCCceeeecc-------ccccccccccccceeeeeecceeec----c
Confidence 8887765311 11100000000 0111223212222211 2357778887665432 22222111 1
Q ss_pred eeEEEEe--CCeEEEEEecCCCCEEEEEEECCCCceeEEEEeccCCceeeeEEEeeCCE-EEE-EecCCeEEEEeCCCCc
Q 045559 253 HTVFGLY--NDSLSFLVFDERESCFDIWTMKERYHWTKEFSTTPILAVDAPIGFWKNDT-FFI-RSNTEELLLYDPNSEE 328 (335)
Q Consensus 253 ~~~l~~~--~g~L~~~~~~~~~~~~~IW~l~~~~~W~~~~~i~~~~~~~~~~~~~~~~~-il~-~~~~~~l~~yd~~~~~ 328 (335)
...+... ++.+.+.... ...+.||-++. . ..+.++........-+.+.++|. ++. ...++.+..||.++++
T Consensus 217 ~~~~~~~p~~~~~l~sg~~--dg~v~~wd~~~-~--~~~~~~~~h~~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~~~ 291 (344)
T 4gqb_B 217 PTSLAWHPQQSEVFVFGDE--NGTVSLVDTKS-T--SCVLSSAVHSQCVTGLVFSPHSVPFLASLSEDCSLAVLDSSLSE 291 (344)
T ss_dssp EEEEEECSSCTTEEEEEET--TSEEEEEESCC-----CCEEEECCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTCCE
T ss_pred ceeeeecCCCCcceEEecc--CCcEEEEECCC-C--cEEEEEcCCCCCEEEEEEccCCCeEEEEEeCCCeEEEEECCCCc
Confidence 1223332 4445555554 57899998776 2 12223322233344456666764 444 4457789999999887
Q ss_pred eee
Q 045559 329 IID 331 (335)
Q Consensus 329 ~~~ 331 (335)
..+
T Consensus 292 ~~~ 294 (344)
T 4gqb_B 292 LFR 294 (344)
T ss_dssp EEE
T ss_pred EEE
Confidence 654
No 77
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=81.85 E-value=26 Score=30.76 Aligned_cols=181 Identities=10% Similarity=-0.007 Sum_probs=87.8
Q ss_pred CceEEEEecchhhhhcCCCCcccCCcCCceeeeeEEeecCCCCCeEEEEEEEEecCccccccCCCceEEEEEcCCCccee
Q 045559 106 GDEIALYNHATRDLKFLPKLTLIDNLESIYTIMFGLGLDPKCNYYKLVYIVTYHDSELGKVLNDSRQVFIYSFSDNSWRN 185 (335)
Q Consensus 106 ~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~l~~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~~~vyss~~~~W~~ 185 (335)
...+.++|+.+++....-..... ...+.++|.. .+-++.-.. .... ....-.+.+|+.+++.-..
T Consensus 233 ~~~i~~~d~~~~~~~~~~~~~~~---------~~~~~~~~~g-~~l~~~~~~--~~~~---~~~dg~i~~~d~~~~~~~~ 297 (433)
T 3bws_A 233 SEDISVIDRKTKLEIRKTDKIGL---------PRGLLLSKDG-KELYIAQFS--ASNQ---ESGGGRLGIYSMDKEKLID 297 (433)
T ss_dssp TTEEEEEETTTTEEEEECCCCSE---------EEEEEECTTS-SEEEEEEEE--SCTT---CSCCEEEEEEETTTTEEEE
T ss_pred CCcEEEEECCCCcEEEEecCCCC---------ceEEEEcCCC-CEEEEEECC--CCcc---ccCCCeEEEEECCCCcEEe
Confidence 56788889888765432222111 3566666643 333322211 1100 0123478889888764322
Q ss_pred cCcccccccccCCCceeeeecce-EEEEeecCCCCCccCceEEEEEECCccceee-ecCCCccccCCCCeeEEEEe-CCe
Q 045559 186 FQGFEFGMYDLDEVLDCTYHNGA-CHWLVPFGAFHPLCCHYVILSFDMSDEVFEE-ILGPNCLLEISPKHTVFGLY-NDS 262 (335)
Q Consensus 186 ~~~~p~~~~~~~~~~~~v~~~G~-~ywl~~~~~~~~~~~~~~i~~fD~~~e~~~~-i~~P~~~~~~~~~~~~l~~~-~g~ 262 (335)
....+..... ....-+|. +|..... ...|..+|+.+.+... ++... .-..++.. +|+
T Consensus 298 ~~~~~~~~~~-----~~~~~~g~~l~~~~~~--------~~~v~v~d~~~~~~~~~~~~~~-------~~~~~~~s~dg~ 357 (433)
T 3bws_A 298 TIGPPGNKRH-----IVSGNTENKIYVSDMC--------CSKIEVYDLKEKKVQKSIPVFD-------KPNTIALSPDGK 357 (433)
T ss_dssp EEEEEECEEE-----EEECSSTTEEEEEETT--------TTEEEEEETTTTEEEEEEECSS-------SEEEEEECTTSS
T ss_pred eccCCCCcce-----EEECCCCCEEEEEecC--------CCEEEEEECCCCcEEEEecCCC-------CCCeEEEcCCCC
Confidence 1111100000 11222453 4444332 3478889988654432 23211 11233333 455
Q ss_pred -EEEEEecCC------------CCEEEEEEECCCCceeEEEEeccCCceeeeEEEeeCCEEEE-Ee-cCCeEEEEeCC
Q 045559 263 -LSFLVFDER------------ESCFDIWTMKERYHWTKEFSTTPILAVDAPIGFWKNDTFFI-RS-NTEELLLYDPN 325 (335)
Q Consensus 263 -L~~~~~~~~------------~~~~~IW~l~~~~~W~~~~~i~~~~~~~~~~~~~~~~~il~-~~-~~~~l~~yd~~ 325 (335)
|++...... .+.+.+|-++. . ..+..+ +......-+.+.++|+.++ .. .++.+..||++
T Consensus 358 ~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~-~--~~~~~~-~~~~~~~~~~~s~dg~~l~~~~~~d~~i~v~~~~ 431 (433)
T 3bws_A 358 YLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTT-D--TVKEFW-EAGNQPTGLDVSPDNRYLVISDFLDHQIRVYRRD 431 (433)
T ss_dssp EEEEEECCCCCTTTCTTSCCSSCCEEEEEETTT-T--EEEEEE-ECSSSEEEEEECTTSCEEEEEETTTTEEEEEEET
T ss_pred EEEEEecCCCccccccccccccceEEEEEECCC-C--cEEEEe-cCCCCCceEEEcCCCCEEEEEECCCCeEEEEEec
Confidence 555544321 13777887664 3 344445 3333344556667887655 43 37789999875
No 78
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=81.47 E-value=9.6 Score=34.19 Aligned_cols=112 Identities=4% Similarity=0.015 Sum_probs=61.4
Q ss_pred ecceEEEEeecCCCCCccCceEEEEEECCccceeeecCCCccccCCCCeeEEEEeCCeEEEEEecCCCCEEEEEEECCCC
Q 045559 205 HNGACHWLVPFGAFHPLCCHYVILSFDMSDEVFEEILGPNCLLEISPKHTVFGLYNDSLSFLVFDERESCFDIWTMKERY 284 (335)
Q Consensus 205 ~~G~~ywl~~~~~~~~~~~~~~i~~fD~~~e~~~~i~~P~~~~~~~~~~~~l~~~~g~L~~~~~~~~~~~~~IW~l~~~~ 284 (335)
-+|.+||.... ...|..+|+++.....+...... ....+...++.|++.... .. ..||.++...
T Consensus 140 ~~g~lyv~d~~--------~~~I~~id~~~g~~~~~~~~~~~-----~~ia~~~~g~~l~~~d~~--~~-~~I~~~d~~~ 203 (409)
T 3hrp_A 140 GNNTVLAYQRD--------DPRVRLISVDDNKVTTVHPGFKG-----GKPAVTKDKQRVYSIGWE--GT-HTVYVYMKAS 203 (409)
T ss_dssp STTEEEEEETT--------TTEEEEEETTTTEEEEEEETCCB-----CBCEECTTSSEEEEEBSS--TT-CEEEEEEGGG
T ss_pred CCCCEEEEecC--------CCcEEEEECCCCEEEEeeccCCC-----CceeEecCCCcEEEEecC--CC-ceEEEEEcCC
Confidence 46888887753 34799999998777665322111 112222222335555443 22 1567766633
Q ss_pred cee--EEEEecc-CCceeeeEEEee-CCEEEEEecCCeEEEEeCCCCceeec
Q 045559 285 HWT--KEFSTTP-ILAVDAPIGFWK-NDTFFIRSNTEELLLYDPNSEEIIDF 332 (335)
Q Consensus 285 ~W~--~~~~i~~-~~~~~~~~~~~~-~~~il~~~~~~~l~~yd~~~~~~~~v 332 (335)
.|. ..-.+.+ ......-+++.+ +|.+++......++.||+++++.+.+
T Consensus 204 ~~~~~~~g~~~~~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~~~~ 255 (409)
T 3hrp_A 204 GWAPTRIGQLGSTFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEVTLI 255 (409)
T ss_dssp TTCEEEEEECCTTSCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCCEEEE
T ss_pred CceeEEeeeccchhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCEEEE
Confidence 443 2212211 111233455566 67788866667899999998875543
No 79
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=80.47 E-value=31 Score=30.67 Aligned_cols=192 Identities=13% Similarity=0.024 Sum_probs=89.3
Q ss_pred eEEEeecCceEEEEecchhhhhcCCCCcccCCcCCceeeeeEEeecCCCCCeEEEEEEEEecCccccccCCCceEEEEEc
Q 045559 99 LFIMFIGGDEIALYNHATRDLKFLPKLTLIDNLESIYTIMFGLGLDPKCNYYKLVYIVTYHDSELGKVLNDSRQVFIYSF 178 (335)
Q Consensus 99 Ll~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~l~~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~~~vyss 178 (335)
+|........+.|||..+++...+-..... ......+.|.|..+.+- +... ..-.+.+++.
T Consensus 134 ~lasGs~dg~i~lWd~~~~~~~~~~~~~gH------~~~V~~l~f~p~~~~~l-~s~s------------~D~~v~iwd~ 194 (435)
T 4e54_B 134 TVAVGSKGGDIMLWNFGIKDKPTFIKGIGA------GGSITGLKFNPLNTNQF-YASS------------MEGTTRLQDF 194 (435)
T ss_dssp CEEEEETTSCEEEECSSCCSCCEEECCCSS------SCCCCEEEECSSCTTEE-EEEC------------SSSCEEEEET
T ss_pred EEEEEeCCCEEEEEECCCCCceeEEEccCC------CCCEEEEEEeCCCCCEE-EEEe------------CCCEEEEeec
Confidence 555555577899999988765433221111 11145677777544442 2221 1235778887
Q ss_pred CCCcceecCcccccccccCCCceeeeecceEEEEeecCCCCCccCceEEEEEECCccceeeecCCCccccCCCCeeEEEE
Q 045559 179 SDNSWRNFQGFEFGMYDLDEVLDCTYHNGACHWLVPFGAFHPLCCHYVILSFDMSDEVFEEILGPNCLLEISPKHTVFGL 258 (335)
Q Consensus 179 ~~~~W~~~~~~p~~~~~~~~~~~~v~~~G~~ywl~~~~~~~~~~~~~~i~~fD~~~e~~~~i~~P~~~~~~~~~~~~l~~ 258 (335)
+++.-+............. .-...-+|.+...+.. ...|..+|+..+....+..... .-..+..
T Consensus 195 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~g~~--------dg~i~~wd~~~~~~~~~~~h~~------~v~~v~~ 258 (435)
T 4e54_B 195 KGNILRVFASSDTINIWFC--SLDVSASSRMVVTGDN--------VGNVILLNMDGKELWNLRMHKK------KVTHVAL 258 (435)
T ss_dssp TSCEEEEEECCSSCSCCCC--CEEEETTTTEEEEECS--------SSBEEEEESSSCBCCCSBCCSS------CEEEEEE
T ss_pred cCCceeEEeccCCCCccEE--EEEECCCCCEEEEEeC--------CCcEeeeccCcceeEEEecccc------eEEeeee
Confidence 7665443321100000000 0112224443333322 2357778886654333221110 1122332
Q ss_pred e-CCe-EEEEEecCCCCEEEEEEECCCCceeEEEEe-ccCCceeeeEEEeeCCEEEE-EecCCeEEEEeCCCCc
Q 045559 259 Y-NDS-LSFLVFDERESCFDIWTMKERYHWTKEFST-TPILAVDAPIGFWKNDTFFI-RSNTEELLLYDPNSEE 328 (335)
Q Consensus 259 ~-~g~-L~~~~~~~~~~~~~IW~l~~~~~W~~~~~i-~~~~~~~~~~~~~~~~~il~-~~~~~~l~~yd~~~~~ 328 (335)
. +|. +.+.+.. ...+.||-+.. ..-...... .....-..-+++.++|..++ ...++.+..||.++.+
T Consensus 259 ~p~~~~~~~s~s~--d~~v~iwd~~~-~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~~~D~~i~iwd~~~~~ 329 (435)
T 4e54_B 259 NPCCDWFLATASV--DQTVKIWDLRQ-VRGKASFLYSLPHRHPVNAACFSPDGARLLTTDQKSEIRVYSASQWD 329 (435)
T ss_dssp CTTCSSEEEEEET--TSBCCEEETTT-CCSSSCCSBCCBCSSCEEECCBCTTSSEEEEEESSSCEEEEESSSSS
T ss_pred cCCCceEEEEecC--cceeeEEeccc-ccccceEEEeeeccccccceeECCCCCeeEEEcCCCEEEEEECCCCc
Confidence 2 444 4444444 46788998776 110110000 01122233344456777554 4456789999987754
No 80
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=80.10 E-value=15 Score=31.35 Aligned_cols=97 Identities=11% Similarity=0.087 Sum_probs=54.8
Q ss_pred eEEEEEECCccceeee-cCCCccccCCCCeeEEEEe-CCeEEEEEecCCCCEEEEEEECCCCceeEEEEeccCCceeeeE
Q 045559 225 YVILSFDMSDEVFEEI-LGPNCLLEISPKHTVFGLY-NDSLSFLVFDERESCFDIWTMKERYHWTKEFSTTPILAVDAPI 302 (335)
Q Consensus 225 ~~i~~fD~~~e~~~~i-~~P~~~~~~~~~~~~l~~~-~g~L~~~~~~~~~~~~~IW~l~~~~~W~~~~~i~~~~~~~~~~ 302 (335)
..|..+|+.+..+..+ .++.... .-..+... +|++.+.... ...+.+|-++. ..+.....+........-+
T Consensus 30 ~~v~i~~~~~~~~~~~~~~~~h~~----~v~~~~~~~~~~~l~~~~~--dg~i~vwd~~~-~~~~~~~~~~~~~~~v~~~ 102 (372)
T 1k8k_C 30 HEVHIYEKSGNKWVQVHELKEHNG----QVTGVDWAPDSNRIVTCGT--DRNAYVWTLKG-RTWKPTLVILRINRAARCV 102 (372)
T ss_dssp SEEEEEEEETTEEEEEEEEECCSS----CEEEEEEETTTTEEEEEET--TSCEEEEEEET-TEEEEEEECCCCSSCEEEE
T ss_pred CEEEEEeCCCCcEEeeeeecCCCC----cccEEEEeCCCCEEEEEcC--CCeEEEEECCC-CeeeeeEEeecCCCceeEE
Confidence 3677778777654333 2222111 12233333 5555444444 46899999986 6666655542233334445
Q ss_pred EEeeCCEEEE-EecCCeEEEEeCCCCc
Q 045559 303 GFWKNDTFFI-RSNTEELLLYDPNSEE 328 (335)
Q Consensus 303 ~~~~~~~il~-~~~~~~l~~yd~~~~~ 328 (335)
.+.++++.++ ...++.+..||+++++
T Consensus 103 ~~~~~~~~l~~~~~d~~v~i~d~~~~~ 129 (372)
T 1k8k_C 103 RWAPNEKKFAVGSGSRVISICYFEQEN 129 (372)
T ss_dssp EECTTSSEEEEEETTSSEEEEEEETTT
T ss_pred EECCCCCEEEEEeCCCEEEEEEecCCC
Confidence 5566776544 4556778888887765
No 81
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=80.06 E-value=48 Score=32.66 Aligned_cols=108 Identities=7% Similarity=0.011 Sum_probs=57.9
Q ss_pred cceEEEEeecCCCCCccCceEEEEEECCccceeeecCCCccccCCCCeeEEEE--eCCeEEEEEecCCCCEEEEEEECCC
Q 045559 206 NGACHWLVPFGAFHPLCCHYVILSFDMSDEVFEEILGPNCLLEISPKHTVFGL--YNDSLSFLVFDERESCFDIWTMKER 283 (335)
Q Consensus 206 ~G~~ywl~~~~~~~~~~~~~~i~~fD~~~e~~~~i~~P~~~~~~~~~~~~l~~--~~g~L~~~~~~~~~~~~~IW~l~~~ 283 (335)
+|.|||.... ...|.++|+....-..+-. .... ....|++ .+|.|++..... ...|.+--|+.
T Consensus 482 ~~~LY~tD~~--------~~~I~v~~ldG~~~~~l~~-~~l~----~P~gIaVDp~~g~LYwtD~g~-~~~I~~~~~dG- 546 (791)
T 3m0c_C 482 HSNIYWTDSV--------LGTVSVADTKGVKRKTLFR-ENGS----KPRAIVVDPVHGFMYWTDWGT-PAKIKKGGLNG- 546 (791)
T ss_dssp TTEEEEEETT--------TTEEEEEETTSSSEEEEEE-CTTC----CEEEEEEETTTTEEEEEECSS-SCEEEEEETTS-
T ss_pred CCcEEEEecC--------CCeEEEEeCCCCeEEEEEe-CCCC----CcceEEEecCCCCEEEecCCC-CCeEEEEecCC-
Confidence 4699998754 3479999987655444311 1111 1223444 467888877542 24444444443
Q ss_pred CceeEEEEeccCCceeeeEEEee---CCEEEEEec-CCeEEEEeCCCCceeec
Q 045559 284 YHWTKEFSTTPILAVDAPIGFWK---NDTFFIRSN-TEELLLYDPNSEEIIDF 332 (335)
Q Consensus 284 ~~W~~~~~i~~~~~~~~~~~~~~---~~~il~~~~-~~~l~~yd~~~~~~~~v 332 (335)
. ....+ -...+..|.++.- ++.||+... ..+|.++|+++...+.+
T Consensus 547 -~--~~~~l-v~~~l~~P~GLavD~~~~~LYwaD~~~~~I~~~d~dG~~~~~v 595 (791)
T 3m0c_C 547 -V--DIYSL-VTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTI 595 (791)
T ss_dssp -C--CEEEE-ECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEE
T ss_pred -C--ceEEE-EeCCCCCceEEEEecCCCeEEEEeCCCCcEEEEecCCCceEEE
Confidence 2 11122 1233456666542 455666543 45788888877655443
No 82
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=79.77 E-value=28 Score=29.80 Aligned_cols=71 Identities=6% Similarity=0.069 Sum_probs=42.5
Q ss_pred eCCe-EEEEEecCCCCEEEEEEECC-CC----c-eeEE-----EEeccCCceeeeEEEeeCCEE-EEEe-cCCeEEEEeC
Q 045559 259 YNDS-LSFLVFDERESCFDIWTMKE-RY----H-WTKE-----FSTTPILAVDAPIGFWKNDTF-FIRS-NTEELLLYDP 324 (335)
Q Consensus 259 ~~g~-L~~~~~~~~~~~~~IW~l~~-~~----~-W~~~-----~~i~~~~~~~~~~~~~~~~~i-l~~~-~~~~l~~yd~ 324 (335)
-+|+ |++.... ...+.+|.++. .. . .... ..+ +......-+.+.++|+. ++.. .++.+.+||+
T Consensus 164 pdg~~l~~~~~~--~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~-~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~ 240 (361)
T 3scy_A 164 PDGKYLLADDLG--TDQIHKFNINPNANADNKEKFLTKGTPEAFKV-APGSGPRHLIFNSDGKFAYLINEIGGTVIAFRY 240 (361)
T ss_dssp TTSSEEEEEETT--TTEEEEEEECTTCCTTTCCCCEEEEEEEEEEC-CTTCCEEEEEECTTSSEEEEEETTTCEEEEEEE
T ss_pred CCCCEEEEEeCC--CCEEEEEEEcCCCCcccccceeecccccceec-CCCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEe
Confidence 3676 5555443 67899999987 21 1 2221 222 22222344566778874 4444 3678999999
Q ss_pred CCCceeec
Q 045559 325 NSEEIIDF 332 (335)
Q Consensus 325 ~~~~~~~v 332 (335)
++++++.+
T Consensus 241 ~~g~~~~~ 248 (361)
T 3scy_A 241 ADGMLDEI 248 (361)
T ss_dssp ETTEEEEE
T ss_pred cCCceEEe
Confidence 88877544
No 83
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=78.45 E-value=26 Score=28.71 Aligned_cols=182 Identities=12% Similarity=0.011 Sum_probs=90.8
Q ss_pred ccceEEEeec-CceEEEEecchhhhhcCCCCcccCCcCCceeeeeEEeecCCCCCeEEEEEEEEecCccccccCCCceEE
Q 045559 96 FEGLFIMFIG-GDEIALYNHATRDLKFLPKLTLIDNLESIYTIMFGLGLDPKCNYYKLVYIVTYHDSELGKVLNDSRQVF 174 (335)
Q Consensus 96 ~~GLl~~~~~-~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~l~~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~~~ 174 (335)
.+|-+.+... ...++++||. ++...++.+... ....++.+|+..+ +. +.. .....+.
T Consensus 113 ~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~-------~~~~~i~~d~~g~---l~-v~~----------~~~~~i~ 170 (300)
T 2qc5_A 113 LNGDIWFTQLNGDRIGKLTAD-GTIYEYDLPNKG-------SYPAFITLGSDNA---LW-FTE----------NQNNSIG 170 (300)
T ss_dssp STTCEEEEETTTTEEEEECTT-SCEEEEECSSTT-------CCEEEEEECTTSS---EE-EEE----------TTTTEEE
T ss_pred CCCCEEEEccCCCeEEEECCC-CCEEEccCCCCC-------CCceeEEECCCCC---EE-EEe----------cCCCeEE
Confidence 3565555543 4577888887 555433221111 1135666676432 22 221 1123466
Q ss_pred EEEcCCCcceecCcccccccccCCCceeeee--cceEEEEeecCCCCCccCceEEEEEECCccceeeecCCCccccCCCC
Q 045559 175 IYSFSDNSWRNFQGFEFGMYDLDEVLDCTYH--NGACHWLVPFGAFHPLCCHYVILSFDMSDEVFEEILGPNCLLEISPK 252 (335)
Q Consensus 175 vyss~~~~W~~~~~~p~~~~~~~~~~~~v~~--~G~~ywl~~~~~~~~~~~~~~i~~fD~~~e~~~~i~~P~~~~~~~~~ 252 (335)
+|+. ++...... .+.... .+ .++.. +|.+|+.... ...|..||. +..+..+..|.... .
T Consensus 171 ~~~~-~g~~~~~~-~~~~~~-~~---~~i~~d~~g~l~v~~~~--------~~~i~~~~~-~g~~~~~~~~~~~~----~ 231 (300)
T 2qc5_A 171 RITN-TGKLEEYP-LPTNAA-AP---VGITSGNDGALWFVEIM--------GNKIGRITT-TGEISEYDIPTPNA----R 231 (300)
T ss_dssp EECT-TCCEEEEE-CSSTTC-CE---EEEEECTTSSEEEEETT--------TTEEEEECT-TCCEEEEECSSTTC----C
T ss_pred EECC-CCcEEEee-CCCCCC-Cc---ceEEECCCCCEEEEccC--------CCEEEEEcC-CCcEEEEECCCCCC----C
Confidence 6666 55554332 111111 11 23333 5777665432 337899998 55666565553221 1
Q ss_pred eeEEEEe-CCeEEEEEecCCCCEEEEEEECCCCceeEEEEeccCC-ceeeeEEEeeCCEEEEEecCCeEEEEeCC
Q 045559 253 HTVFGLY-NDSLSFLVFDERESCFDIWTMKERYHWTKEFSTTPIL-AVDAPIGFWKNDTFFIRSNTEELLLYDPN 325 (335)
Q Consensus 253 ~~~l~~~-~g~L~~~~~~~~~~~~~IW~l~~~~~W~~~~~i~~~~-~~~~~~~~~~~~~il~~~~~~~l~~yd~~ 325 (335)
-..++.. +|.|++.... .+.+.++-.+ .... .+.+ +.. ....-+.+.++|.+++.... .+..||++
T Consensus 232 ~~~i~~d~~g~l~v~~~~--~~~i~~~~~~--g~~~-~~~~-~~~~~~~~~i~~~~~g~l~v~~~~-~i~~~~p~ 299 (300)
T 2qc5_A 232 PHAITAGKNSEIWFTEWG--ANQIGRITND--NTIQ-EYQL-QTENAEPHGITFGKDGSVWFALKC-KIGKLNLN 299 (300)
T ss_dssp EEEEEECSTTCEEEEETT--TTEEEEECTT--SCEE-EEEC-CSTTCCCCCEEECTTSCEEEECSS-EEEEEEEC
T ss_pred ceEEEECCCCCEEEeccC--CCeEEEECCC--CcEE-EEEC-CccCCccceeEeCCCCCEEEEccC-ceEEeCCC
Confidence 2234433 6778777644 3455444332 3322 3334 211 12333445557888887765 89999986
No 84
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=78.44 E-value=29 Score=29.12 Aligned_cols=135 Identities=8% Similarity=0.009 Sum_probs=77.6
Q ss_pred CceEEEEEcCCCcceecCcccccccccCCCceeeeecceEEEEeecCCCCCccCceEEEEEECCccce-eeecCCCcccc
Q 045559 170 SRQVFIYSFSDNSWRNFQGFEFGMYDLDEVLDCTYHNGACHWLVPFGAFHPLCCHYVILSFDMSDEVF-EEILGPNCLLE 248 (335)
Q Consensus 170 ~~~~~vyss~~~~W~~~~~~p~~~~~~~~~~~~v~~~G~~ywl~~~~~~~~~~~~~~i~~fD~~~e~~-~~i~~P~~~~~ 248 (335)
...+.+++.++++=.. ..+.+...+. ..-...++.+|.++.. ...+..||.++.+- ..++.|..
T Consensus 64 ~S~v~~vD~~Tgkv~~--~~~l~~~~Fg--eGit~~g~~ly~ltw~--------~~~v~v~D~~t~~~~~ti~~~~e--- 128 (262)
T 3nol_A 64 RSSIRKVDIESGKTLQ--QIELGKRYFG--EGISDWKDKIVGLTWK--------NGLGFVWNIRNLRQVRSFNYDGE--- 128 (262)
T ss_dssp EEEEEEECTTTCCEEE--EEECCTTCCE--EEEEEETTEEEEEESS--------SSEEEEEETTTCCEEEEEECSSC---
T ss_pred CceEEEEECCCCcEEE--EEecCCccce--eEEEEeCCEEEEEEee--------CCEEEEEECccCcEEEEEECCCC---
Confidence 4578888888875221 1222211111 1235566789888875 34799999976544 44565542
Q ss_pred CCCCeeEEEEeCCeEEEEEecCCCCEEEEEEECCCCceeEEEEeccCCceeee------EEEeeCCEEEEEe-cCCeEEE
Q 045559 249 ISPKHTVFGLYNDSLSFLVFDERESCFDIWTMKERYHWTKEFSTTPILAVDAP------IGFWKNDTFFIRS-NTEELLL 321 (335)
Q Consensus 249 ~~~~~~~l~~~~g~L~~~~~~~~~~~~~IW~l~~~~~W~~~~~i~~~~~~~~~------~~~~~~~~il~~~-~~~~l~~ 321 (335)
...|+.-++.|++... .+ .||.+|. ..=..+.+| +...-..| +. +.+|+++... .++.+.+
T Consensus 129 ----G~glt~dg~~L~~SdG---s~--~i~~iDp-~T~~v~~~I-~V~~~g~~~~~lNELe-~~~G~lyan~w~~~~I~v 196 (262)
T 3nol_A 129 ----GWGLTHNDQYLIMSDG---TP--VLRFLDP-ESLTPVRTI-TVTAHGEELPELNELE-WVDGEIFANVWQTNKIVR 196 (262)
T ss_dssp ----CCCEEECSSCEEECCS---SS--EEEEECT-TTCSEEEEE-ECEETTEECCCEEEEE-EETTEEEEEETTSSEEEE
T ss_pred ----ceEEecCCCEEEEECC---CC--eEEEEcC-CCCeEEEEE-EeccCCccccccceeE-EECCEEEEEEccCCeEEE
Confidence 1234544555777653 23 3788887 322344555 33211112 22 2378888765 4678999
Q ss_pred EeCCCCceee
Q 045559 322 YDPNSEEIID 331 (335)
Q Consensus 322 yd~~~~~~~~ 331 (335)
-|++|++..+
T Consensus 197 IDp~tG~V~~ 206 (262)
T 3nol_A 197 IDPETGKVTG 206 (262)
T ss_dssp ECTTTCBEEE
T ss_pred EECCCCcEEE
Confidence 9999988743
No 85
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=78.44 E-value=30 Score=29.25 Aligned_cols=144 Identities=7% Similarity=0.019 Sum_probs=72.6
Q ss_pred CceEEEEEcCCCcceecCcccccccccCCCceeeeecceEEEEeecCCCCCccCceEEEEEECCccce-eeecCCCcccc
Q 045559 170 SRQVFIYSFSDNSWRNFQGFEFGMYDLDEVLDCTYHNGACHWLVPFGAFHPLCCHYVILSFDMSDEVF-EEILGPNCLLE 248 (335)
Q Consensus 170 ~~~~~vyss~~~~W~~~~~~p~~~~~~~~~~~~v~~~G~~ywl~~~~~~~~~~~~~~i~~fD~~~e~~-~~i~~P~~~~~ 248 (335)
.-.+.+++..++.-... .+...... ...+.-+|...|++... ...|..+|+++.+. ..++.+.....
T Consensus 68 ~~~v~~~d~~~~~~~~~--~~~~~~~~---~~~~s~dg~~l~v~~~~-------~~~v~~~d~~~~~~~~~~~~~~~~~~ 135 (353)
T 3vgz_A 68 GGVVYRLDPVTLEVTQA--IHNDLKPF---GATINNTTQTLWFGNTV-------NSAVTAIDAKTGEVKGRLVLDDRKRT 135 (353)
T ss_dssp SEEEEEECTTTCCEEEE--EEESSCCC---SEEEETTTTEEEEEETT-------TTEEEEEETTTCCEEEEEESCCCCCC
T ss_pred CccEEEEcCCCCeEEEE--EecCCCcc---eEEECCCCCEEEEEecC-------CCEEEEEeCCCCeeEEEEecCCCccc
Confidence 34677777776643211 11110001 12344466633333332 34789999987665 34455432110
Q ss_pred --CCCC-eeEEEEe-CCe-EEEEEecCCCCEEEEEEECCCCceeEEEEecc-CCceeeeEEEeeCCE-EEEEecCCeEEE
Q 045559 249 --ISPK-HTVFGLY-NDS-LSFLVFDERESCFDIWTMKERYHWTKEFSTTP-ILAVDAPIGFWKNDT-FFIRSNTEELLL 321 (335)
Q Consensus 249 --~~~~-~~~l~~~-~g~-L~~~~~~~~~~~~~IW~l~~~~~W~~~~~i~~-~~~~~~~~~~~~~~~-il~~~~~~~l~~ 321 (335)
.... ...+... +|+ +++..... ...+.+|-++. ......+ + ......-+.+.++|+ +++...++.+..
T Consensus 136 ~~~~~~~~~~~~~s~dg~~l~~~~~~~-~~~i~~~d~~~---~~~~~~~-~~~~~~~~~~~~s~dg~~l~~~~~~~~i~~ 210 (353)
T 3vgz_A 136 EEVRPLQPRELVADDATNTVYISGIGK-ESVIWVVDGGN---IKLKTAI-QNTGKMSTGLALDSEGKRLYTTNADGELIT 210 (353)
T ss_dssp SSCCCCEEEEEEEETTTTEEEEEEESS-SCEEEEEETTT---TEEEEEE-CCCCTTCCCCEEETTTTEEEEECTTSEEEE
T ss_pred cccCCCCCceEEECCCCCEEEEEecCC-CceEEEEcCCC---CceEEEe-cCCCCccceEEECCCCCEEEEEcCCCeEEE
Confidence 0001 1223333 555 66665432 45566665543 3444555 3 222234455666776 555556778999
Q ss_pred EeCCCCcee
Q 045559 322 YDPNSEEII 330 (335)
Q Consensus 322 yd~~~~~~~ 330 (335)
||+++++..
T Consensus 211 ~d~~~~~~~ 219 (353)
T 3vgz_A 211 IDTADNKIL 219 (353)
T ss_dssp EETTTTEEE
T ss_pred EECCCCeEE
Confidence 999987764
No 86
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=77.82 E-value=31 Score=29.10 Aligned_cols=105 Identities=9% Similarity=-0.028 Sum_probs=57.7
Q ss_pred ecceEEEEeecCCCCCccCceEEEEEECCccceeeecCCCccccCCCCeeEEEE-eCCeEEEEEecCCCCEEEEEEECC-
Q 045559 205 HNGACHWLVPFGAFHPLCCHYVILSFDMSDEVFEEILGPNCLLEISPKHTVFGL-YNDSLSFLVFDERESCFDIWTMKE- 282 (335)
Q Consensus 205 ~~G~~ywl~~~~~~~~~~~~~~i~~fD~~~e~~~~i~~P~~~~~~~~~~~~l~~-~~g~L~~~~~~~~~~~~~IW~l~~- 282 (335)
-+|.+||.... ...|..+|...+.-..+..+.. -..++. -+|+|++..... ....|+.++.
T Consensus 41 ~~g~lyv~d~~--------~~~I~~~d~~g~~~~~~~~~~~-------p~gia~~~dG~l~vad~~~--~~~~v~~~d~~ 103 (306)
T 2p4o_A 41 PDGTIFVTNHE--------VGEIVSITPDGNQQIHATVEGK-------VSGLAFTSNGDLVATGWNA--DSIPVVSLVKS 103 (306)
T ss_dssp TTSCEEEEETT--------TTEEEEECTTCCEEEEEECSSE-------EEEEEECTTSCEEEEEECT--TSCEEEEEECT
T ss_pred CCCCEEEEeCC--------CCeEEEECCCCceEEEEeCCCC-------ceeEEEcCCCcEEEEeccC--CcceEEEEcCC
Confidence 36888887643 3479999987754333344421 122343 367787776542 2345666553
Q ss_pred CCceeEEEEeccCCceeeeEEEeeCCEEEEEe-cCCeEEEEeCCCC
Q 045559 283 RYHWTKEFSTTPILAVDAPIGFWKNDTFFIRS-NTEELLLYDPNSE 327 (335)
Q Consensus 283 ~~~W~~~~~i~~~~~~~~~~~~~~~~~il~~~-~~~~l~~yd~~~~ 327 (335)
.........+ +-.....-.+++.++.+++.. ....++.+|+.++
T Consensus 104 ~g~~~~~~~~-~~~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~ 148 (306)
T 2p4o_A 104 DGTVETLLTL-PDAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQP 148 (306)
T ss_dssp TSCEEEEEEC-TTCSCEEEEEESSSSEEEEEETTTTEEEEEETTTT
T ss_pred CCeEEEEEeC-CCccccCcccccCCCcEEEEECCCCeEEEEeCCCC
Confidence 3554444433 221111222334455666655 3678999998765
No 87
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=77.73 E-value=38 Score=30.11 Aligned_cols=108 Identities=7% Similarity=-0.021 Sum_probs=57.2
Q ss_pred cceEEEEeecCCCCCccCceEEEEEECCccceeeecCCCccccCCCCeeEEEE--eCCeEEEEEecCCCCEEEEEEECCC
Q 045559 206 NGACHWLVPFGAFHPLCCHYVILSFDMSDEVFEEILGPNCLLEISPKHTVFGL--YNDSLSFLVFDERESCFDIWTMKER 283 (335)
Q Consensus 206 ~G~~ywl~~~~~~~~~~~~~~i~~fD~~~e~~~~i~~P~~~~~~~~~~~~l~~--~~g~L~~~~~~~~~~~~~IW~l~~~ 283 (335)
+|.|||.... ...|..+|+....-..+- ..... ....|+. .+|.|+...... ...|..--|+.
T Consensus 170 ~~~lY~~d~~--------~~~I~~~~~~g~~~~~l~-~~~~~----~P~~iavdp~~g~ly~td~~~-~~~I~~~~~dG- 234 (400)
T 3p5b_L 170 HSNIYWTDSV--------LGTVSVADTKGVKRKTLF-RENGS----KPRAIVVDPVHGFMYWTDWGT-PAKIKKGGLNG- 234 (400)
T ss_dssp TTEEEEEETT--------TTEEEEECTTTCSEEEEE-ECSSC----CEEEEEEETTTTEEEEEECSS-SCCEEEEETTS-
T ss_pred CCceEEEECC--------CCeEEEEeCCCCceEEEE-eCCCC----CcceEEEecccCeEEEEeCCC-CCEEEEEeCCC-
Confidence 6899998754 347889998766544331 11111 1223444 367788776432 23343333333
Q ss_pred CceeEEEEeccCCceeeeEEEe--e-CCEEEEEec-CCeEEEEeCCCCceeec
Q 045559 284 YHWTKEFSTTPILAVDAPIGFW--K-NDTFFIRSN-TEELLLYDPNSEEIIDF 332 (335)
Q Consensus 284 ~~W~~~~~i~~~~~~~~~~~~~--~-~~~il~~~~-~~~l~~yd~~~~~~~~v 332 (335)
.-.+ .+ -...+..|.++. . ++.||+... ..+|.++|+++...+.+
T Consensus 235 -~~~~--~~-~~~~l~~P~glavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~ 283 (400)
T 3p5b_L 235 -VDIY--SL-VTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTI 283 (400)
T ss_dssp -CSCE--EE-ECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCCEEE
T ss_pred -CccE--EE-EECCCCceEEEEEEeCCCEEEEEECCCCEEEEEeCCCCccEEE
Confidence 2111 12 112344565543 2 455666543 56799999887655443
No 88
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=77.64 E-value=52 Score=31.61 Aligned_cols=139 Identities=9% Similarity=0.080 Sum_probs=72.2
Q ss_pred ceEEEEEcCCC--cceecCcccccccccCCCceeee-ecceEEEEeecCCCCCccCceEEEEEECCcc---ceeee-cCC
Q 045559 171 RQVFIYSFSDN--SWRNFQGFEFGMYDLDEVLDCTY-HNGACHWLVPFGAFHPLCCHYVILSFDMSDE---VFEEI-LGP 243 (335)
Q Consensus 171 ~~~~vyss~~~--~W~~~~~~p~~~~~~~~~~~~v~-~~G~~ywl~~~~~~~~~~~~~~i~~fD~~~e---~~~~i-~~P 243 (335)
..+.+.++.++ .|+.+... .. .. ...+. -++.+|+++..+.. ...|+..|+.+. .|+.+ +-.
T Consensus 259 ~~i~~~d~~~~~~~~~~l~~~-~~--~~---~~~~~~~g~~l~~~t~~~~~-----~~~l~~~d~~~~~~~~~~~l~~~~ 327 (693)
T 3iuj_A 259 NRLYVKDLSQENAPLLTVQGD-LD--AD---VSLVDNKGSTLYLLTNRDAP-----NRRLVTVDAANPGPAHWRDLIPER 327 (693)
T ss_dssp CEEEEEETTSTTCCCEEEECS-SS--SC---EEEEEEETTEEEEEECTTCT-----TCEEEEEETTSCCGGGCEEEECCC
T ss_pred cEEEEEECCCCCCceEEEeCC-CC--ce---EEEEeccCCEEEEEECCCCC-----CCEEEEEeCCCCCccccEEEecCC
Confidence 35666666554 56655311 11 00 11233 34678888765432 468999998763 45654 322
Q ss_pred CccccCCCCeeEEEEeCCeEEEEEecCCCCEEEEEEECCCCceeEEEEeccCCceeee--EEEeeCCE-EEEEec----C
Q 045559 244 NCLLEISPKHTVFGLYNDSLSFLVFDERESCFDIWTMKERYHWTKEFSTTPILAVDAP--IGFWKNDT-FFIRSN----T 316 (335)
Q Consensus 244 ~~~~~~~~~~~~l~~~~g~L~~~~~~~~~~~~~IW~l~~~~~W~~~~~i~~~~~~~~~--~~~~~~~~-il~~~~----~ 316 (335)
.. .. .+...++.|.+..... ..-.|++++-...+.+ .+ +++..... +....+++ +++... .
T Consensus 328 ~~------~~-~~s~~g~~lv~~~~~~--g~~~l~~~d~~g~~~~--~l-~~p~~~~~~~~~~~~d~~~l~~~~ss~~tP 395 (693)
T 3iuj_A 328 QQ------VL-TVHSGSGYLFAEYMVD--ATARVEQFDYEGKRVR--EV-ALPGLGSVSGFNGKHDDPALYFGFENYAQP 395 (693)
T ss_dssp SS------CE-EEEEETTEEEEEEEET--TEEEEEEECTTSCEEE--EE-CCSSSSEEEECCCCTTCSCEEEEEECSSSC
T ss_pred CC------EE-EEEEECCEEEEEEEEC--CeeEEEEEECCCCeeE--Ee-ecCCCceEEeeecCCCCCEEEEEecCCCCC
Confidence 21 22 4444556676666653 3344555554234433 45 33332222 22233444 665543 2
Q ss_pred CeEEEEeCCCCceeec
Q 045559 317 EELLLYDPNSEEIIDF 332 (335)
Q Consensus 317 ~~l~~yd~~~~~~~~v 332 (335)
..++.||+++++.+.+
T Consensus 396 ~~l~~~d~~~g~~~~l 411 (693)
T 3iuj_A 396 PTLYRFEPKSGAISLY 411 (693)
T ss_dssp CEEEEECTTTCCEEEE
T ss_pred CEEEEEECCCCeEEEE
Confidence 6799999998876644
No 89
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=77.26 E-value=27 Score=28.25 Aligned_cols=188 Identities=10% Similarity=0.011 Sum_probs=89.5
Q ss_pred cccceEEE-ee-cCceEEEEecchhhhhcCCCCcccCCcCCceeeeeEEeecCCCCCeEEEEEEEEecCccccccCCCce
Q 045559 95 PFEGLFIM-FI-GGDEIALYNHATRDLKFLPKLTLIDNLESIYTIMFGLGLDPKCNYYKLVYIVTYHDSELGKVLNDSRQ 172 (335)
Q Consensus 95 s~~GLl~~-~~-~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~l~~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~ 172 (335)
+.+|-+.+ .. ....+.++|+.++....++..... ...++.+|+.. . ++ +.. . .-.
T Consensus 32 ~~~g~l~v~~~~~~~~i~~~~~~~~~~~~~~~~~~~--------~p~~i~~~~~g-~--l~-v~~----------~-~~~ 88 (270)
T 1rwi_B 32 DSAGNVYVTSEGMYGRVVKLATGSTGTTVLPFNGLY--------QPQGLAVDGAG-T--VY-VTD----------F-NNR 88 (270)
T ss_dssp CTTCCEEEEECSSSCEEEEECC-----EECCCCSCC--------SCCCEEECTTC-C--EE-EEE----------T-TTE
T ss_pred CCCCCEEEEccCCCCcEEEecCCCcccceEeeCCcC--------CcceeEECCCC-C--EE-EEc----------C-CCE
Confidence 34565555 42 356788999988776655433211 13456667643 2 22 211 1 235
Q ss_pred EEEEEcCCCcceecCcccccccccCCCceeeee--cceEEEEeecCCCCCccCceEEEEEECCccceeeecCCCccccCC
Q 045559 173 VFIYSFSDNSWRNFQGFEFGMYDLDEVLDCTYH--NGACHWLVPFGAFHPLCCHYVILSFDMSDEVFEEILGPNCLLEIS 250 (335)
Q Consensus 173 ~~vyss~~~~W~~~~~~p~~~~~~~~~~~~v~~--~G~~ywl~~~~~~~~~~~~~~i~~fD~~~e~~~~i~~P~~~~~~~ 250 (335)
+.+|+..++.-........ ..+ .++.+ +|.+|+.... ...|..+|..+.......... ..
T Consensus 89 i~~~d~~~~~~~~~~~~~~---~~p---~~i~~~~~g~l~v~~~~--------~~~i~~~~~~~~~~~~~~~~~-~~--- 150 (270)
T 1rwi_B 89 VVTLAAGSNNQTVLPFDGL---NYP---EGLAVDTQGAVYVADRG--------NNRVVKLAAGSKTQTVLPFTG-LN--- 150 (270)
T ss_dssp EEEECTTCSCCEECCCCSC---SSE---EEEEECTTCCEEEEEGG--------GTEEEEECTTCCSCEECCCCS-CC---
T ss_pred EEEEeCCCceEeeeecCCc---CCC---cceEECCCCCEEEEECC--------CCEEEEEECCCceeEeecccc-CC---
Confidence 6777766554332221110 111 13322 6776665432 336888887665443321111 11
Q ss_pred CCeeEEEEe-CCeEEEEEecCCCCEEEEEEECCCCceeEEEEeccCCceeeeE--EEeeCCEEEEEec-CCeEEEEeCCC
Q 045559 251 PKHTVFGLY-NDSLSFLVFDERESCFDIWTMKERYHWTKEFSTTPILAVDAPI--GFWKNDTFFIRSN-TEELLLYDPNS 326 (335)
Q Consensus 251 ~~~~~l~~~-~g~L~~~~~~~~~~~~~IW~l~~~~~W~~~~~i~~~~~~~~~~--~~~~~~~il~~~~-~~~l~~yd~~~ 326 (335)
....++.. +|+|++.... ...+.+|-.+. .. .. .. ....+..|. ++.++|.+++... .+.|..||+++
T Consensus 151 -~p~~i~~~~~g~l~v~~~~--~~~i~~~~~~~-~~--~~-~~-~~~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~ 222 (270)
T 1rwi_B 151 -DPDGVAVDNSGNVYVTDTD--NNRVVKLEAES-NN--QV-VL-PFTDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGS 222 (270)
T ss_dssp -SCCCEEECTTCCEEEEEGG--GTEEEEECTTT-CC--EE-EC-CCSSCCSEEEEEECTTCCEEEEETTTSCEEEECTTC
T ss_pred -CceeEEEeCCCCEEEEECC--CCEEEEEecCC-Cc--eE-ee-cccCCCCceEEEECCCCCEEEEECCCCcEEEEcCCC
Confidence 11123333 6777777654 34555554443 21 11 12 122223344 4445677777664 56799999988
Q ss_pred Cceee
Q 045559 327 EEIID 331 (335)
Q Consensus 327 ~~~~~ 331 (335)
+....
T Consensus 223 ~~~~~ 227 (270)
T 1rwi_B 223 TTSTV 227 (270)
T ss_dssp SCCEE
T ss_pred Cccee
Confidence 76543
No 90
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=77.23 E-value=39 Score=29.99 Aligned_cols=57 Identities=7% Similarity=0.036 Sum_probs=32.0
Q ss_pred CCEEEEEEECCCCceeEEEEec-cCC-ceeeeEEEeeCCEEEEEecCCeEEEEeCCCCceee
Q 045559 272 ESCFDIWTMKERYHWTKEFSTT-PIL-AVDAPIGFWKNDTFFIRSNTEELLLYDPNSEEIID 331 (335)
Q Consensus 272 ~~~~~IW~l~~~~~W~~~~~i~-~~~-~~~~~~~~~~~~~il~~~~~~~l~~yd~~~~~~~~ 331 (335)
...+.||-... .. .+.++. +.. .+.....+.++|+++....++.+..+|+++++.+|
T Consensus 377 ~~~i~iwd~~~-g~--~~~~l~~~~~~~v~s~~~fspdg~~lasg~d~~i~iW~~~~gk~rK 435 (435)
T 4e54_B 377 LRTIDVFDGNS-GK--MMCQLYDPESSGISSLNEFNPMGDTLASAMGYHILIWSQQEARTRK 435 (435)
T ss_dssp CCCEEEECSSS-CC--EEEEECCSSCCCCCCEEEECTTSSCEEEECSSEEEECCCC------
T ss_pred CCEEEEEECCC-Cc--EEEEEeCCCCCcEEEEEEECCCCCEEEEEcCCcEEEEECCcCeeeC
Confidence 35688887665 32 233331 222 23444456778888777777789999999987654
No 91
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=76.91 E-value=31 Score=28.71 Aligned_cols=197 Identities=7% Similarity=0.028 Sum_probs=95.0
Q ss_pred cccceEEEeecCceEEEEecchhhhhc-CCCCcccCCcCCceeeeeEEeecCCCCCeEEEEEEEEecCccccccCCCceE
Q 045559 95 PFEGLFIMFIGGDEIALYNHATRDLKF-LPKLTLIDNLESIYTIMFGLGLDPKCNYYKLVYIVTYHDSELGKVLNDSRQV 173 (335)
Q Consensus 95 s~~GLl~~~~~~~~~~V~NP~T~~~~~-LP~~~~~~~~~~~~~~~~~l~~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~~ 173 (335)
+-+|-+++......+.|||..+++... +...... +.......+.+.|.. .+-+ ... ..-.+
T Consensus 60 ~~~~~~l~~~~dg~i~iw~~~~~~~~~~~~~~~~~----~~~~~v~~~~~~~~~-~~l~-~~~------------~d~~i 121 (337)
T 1gxr_A 60 SNPTRHVYTGGKGCVKVWDISHPGNKSPVSQLDCL----NRDNYIRSCKLLPDG-CTLI-VGG------------EASTL 121 (337)
T ss_dssp CSSSSEEEEECBSEEEEEETTSTTCCSCSEEEECS----CTTSBEEEEEECTTS-SEEE-EEE------------SSSEE
T ss_pred ecCCcEEEEcCCCeEEEEECCCCCceeeeeccccc----CCCCcEEEEEEcCCC-CEEE-EEc------------CCCcE
Confidence 345544444446788999988765322 1111100 001114566666633 3322 221 12368
Q ss_pred EEEEcCCCcceecCcccccccccCCCceeeeecceEEEEeecCCCCCccCceEEEEEECCccceeee-cCCCccccCCCC
Q 045559 174 FIYSFSDNSWRNFQGFEFGMYDLDEVLDCTYHNGACHWLVPFGAFHPLCCHYVILSFDMSDEVFEEI-LGPNCLLEISPK 252 (335)
Q Consensus 174 ~vyss~~~~W~~~~~~p~~~~~~~~~~~~v~~~G~~ywl~~~~~~~~~~~~~~i~~fD~~~e~~~~i-~~P~~~~~~~~~ 252 (335)
.+|+.+++................ .-...-+|.....+.. ...|..+|+.+.+.... ..... .
T Consensus 122 ~~~d~~~~~~~~~~~~~~~~~~i~--~~~~~~~~~~l~~~~~--------dg~v~~~d~~~~~~~~~~~~~~~------~ 185 (337)
T 1gxr_A 122 SIWDLAAPTPRIKAELTSSAPACY--ALAISPDSKVCFSCCS--------DGNIAVWDLHNQTLVRQFQGHTD------G 185 (337)
T ss_dssp EEEECCCC--EEEEEEECSSSCEE--EEEECTTSSEEEEEET--------TSCEEEEETTTTEEEEEECCCSS------C
T ss_pred EEEECCCCCcceeeecccCCCceE--EEEECCCCCEEEEEeC--------CCcEEEEeCCCCceeeeeecccC------c
Confidence 889888876543321111000000 0011114443333332 23577888876644322 22111 1
Q ss_pred eeEEEEe-CCeEEEEEecCCCCEEEEEEECCCCceeEEEEeccCCceeeeEEEeeCCEEEE-EecCCeEEEEeCCCCcee
Q 045559 253 HTVFGLY-NDSLSFLVFDERESCFDIWTMKERYHWTKEFSTTPILAVDAPIGFWKNDTFFI-RSNTEELLLYDPNSEEII 330 (335)
Q Consensus 253 ~~~l~~~-~g~L~~~~~~~~~~~~~IW~l~~~~~W~~~~~i~~~~~~~~~~~~~~~~~il~-~~~~~~l~~yd~~~~~~~ 330 (335)
-..+... +|...+.... ...+.+|-++. . .....+ ....-..-+.+.++++.++ ...++.+..||+++++..
T Consensus 186 i~~~~~~~~~~~l~~~~~--dg~i~~~d~~~-~--~~~~~~-~~~~~v~~~~~s~~~~~l~~~~~~~~i~~~~~~~~~~~ 259 (337)
T 1gxr_A 186 ASCIDISNDGTKLWTGGL--DNTVRSWDLRE-G--RQLQQH-DFTSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPDKY 259 (337)
T ss_dssp EEEEEECTTSSEEEEEET--TSEEEEEETTT-T--EEEEEE-ECSSCEEEEEECTTSSEEEEEETTSCEEEEETTSSCEE
T ss_pred eEEEEECCCCCEEEEEec--CCcEEEEECCC-C--ceEeee-cCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCCeE
Confidence 2223333 5555444444 57899998876 3 233334 3333344455566777554 455778999999887654
Q ss_pred e
Q 045559 331 D 331 (335)
Q Consensus 331 ~ 331 (335)
.
T Consensus 260 ~ 260 (337)
T 1gxr_A 260 Q 260 (337)
T ss_dssp E
T ss_pred E
Confidence 3
No 92
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=76.54 E-value=32 Score=29.97 Aligned_cols=64 Identities=11% Similarity=0.203 Sum_probs=42.1
Q ss_pred CeEEEEEe-cCC-----CCEEEEEEECCCCceeEEEEeccCCceeeeEEEeeCCEEEEEecCCeEEEEeCCCC
Q 045559 261 DSLSFLVF-DER-----ESCFDIWTMKERYHWTKEFSTTPILAVDAPIGFWKNDTFFIRSNTEELLLYDPNSE 327 (335)
Q Consensus 261 g~L~~~~~-~~~-----~~~~~IW~l~~~~~W~~~~~i~~~~~~~~~~~~~~~~~il~~~~~~~l~~yd~~~~ 327 (335)
+++++... ... ...-.||+.+- .....+.++ +... ..-+.+.++|+.++..+.+.|.+||++++
T Consensus 266 ~~lyv~~~~~~~~~~~~~~~~~v~viD~-~t~~~v~~i-~~~~-p~~ia~spdg~~l~v~n~~~v~v~D~~t~ 335 (361)
T 2oiz_A 266 GRMYVFMHPDGKEGTHKFPAAEIWVMDT-KTKQRVARI-PGRD-ALSMTIDQQRNLMLTLDGGNVNVYDISQP 335 (361)
T ss_dssp TEEEEEEESSCCTTCTTCCCSEEEEEET-TTTEEEEEE-ECTT-CCEEEEETTTTEEEEECSSCEEEEECSSS
T ss_pred CeEEEEEccCCCcccccCCCceEEEEEC-CCCcEEEEE-ecCC-eeEEEECCCCCEEEEeCCCeEEEEECCCC
Confidence 55777765 110 11235666665 444677788 6766 66677788888666555588999999998
No 93
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=76.06 E-value=34 Score=28.70 Aligned_cols=98 Identities=8% Similarity=-0.066 Sum_probs=53.2
Q ss_pred eEEEEEECCc-cc--eeeecCCCccccCCCCeeEEEEe--CCeEEEEEecCCCCEEEEEEECCC--C-ceeEEEEeccCC
Q 045559 225 YVILSFDMSD-EV--FEEILGPNCLLEISPKHTVFGLY--NDSLSFLVFDERESCFDIWTMKER--Y-HWTKEFSTTPIL 296 (335)
Q Consensus 225 ~~i~~fD~~~-e~--~~~i~~P~~~~~~~~~~~~l~~~--~g~L~~~~~~~~~~~~~IW~l~~~--~-~W~~~~~i~~~~ 296 (335)
..|..+|+.+ .. ......+... .-..+... +|.+.++... .+.+.||.++.. . .......+....
T Consensus 170 ~~i~i~d~~~~~~~~~~~~~~~~~~-----~i~~i~~~~~~~~~l~~~~~--dg~i~i~~~~~~~~~~~~~~~~~~~~~~ 242 (342)
T 1yfq_A 170 SQVQWFRLPLCEDDNGTIEESGLKY-----QIRDVALLPKEQEGYACSSI--DGRVAVEFFDDQGDDYNSSKRFAFRCHR 242 (342)
T ss_dssp TEEEEEESSCCTTCCCEEEECSCSS-----CEEEEEECSGGGCEEEEEET--TSEEEEEECCTTCCSTTCTTCEEEECCC
T ss_pred CeEEEEECCccccccceeeecCCCC-----ceeEEEECCCCCCEEEEEec--CCcEEEEEEcCCCcccccccceeeeccc
Confidence 3688899877 32 2223222211 12233443 4665555554 578999999762 0 012222331111
Q ss_pred c---------eeeeEEEeeCCEEEE-EecCCeEEEEeCCCCce
Q 045559 297 A---------VDAPIGFWKNDTFFI-RSNTEELLLYDPNSEEI 329 (335)
Q Consensus 297 ~---------~~~~~~~~~~~~il~-~~~~~~l~~yd~~~~~~ 329 (335)
. ...-+.+.+++++++ ...++.+..||+++++.
T Consensus 243 ~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~ 285 (342)
T 1yfq_A 243 LNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKK 285 (342)
T ss_dssp CCTTCCSSCCCEEEEEECTTTCCEEEEETTSCEEEEETTTTEE
T ss_pred ccccccccceeEEEEEEcCCCCEEEEecCCceEEEEcCccHhH
Confidence 1 234455566777544 45577899999998764
No 94
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=75.35 E-value=37 Score=28.87 Aligned_cols=183 Identities=9% Similarity=0.046 Sum_probs=88.5
Q ss_pred EEEeecCceEEEEecchhhhhcC-CCCcccCCcCCceeeeeEEeecCCCCCeEEEEEEEEecCccccccCCCceEEEEEc
Q 045559 100 FIMFIGGDEIALYNHATRDLKFL-PKLTLIDNLESIYTIMFGLGLDPKCNYYKLVYIVTYHDSELGKVLNDSRQVFIYSF 178 (335)
Q Consensus 100 l~~~~~~~~~~V~NP~T~~~~~L-P~~~~~~~~~~~~~~~~~l~~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~~~vyss 178 (335)
|++.. ...+.+.++.+++...+ |... . ..++.+|+..+. ++.. . .....+..++.
T Consensus 4 ll~~~-~~~I~~i~~~~~~~~~~~~~~~-~---------p~g~~~d~~~~~--ly~~-D----------~~~~~I~~~~~ 59 (316)
T 1ijq_A 4 LFFTN-RHEVRKMTLDRSEYTSLIPNLR-N---------VVALDTEVASNR--IYWS-D----------LSQRMICSTQL 59 (316)
T ss_dssp EEEEC-BSSEEEEETTSCCCEEEECSCS-S---------EEEEEEETTTTE--EEEE-E----------TTTTEEEEEEC
T ss_pred EEEEC-CCeEEEEECCCcceEehhcCCC-c---------eEEEEEEeCCCE--EEEE-E----------CCCCcEEEEEC
Confidence 34444 55677777777665443 2211 1 467888875543 2222 1 12345666666
Q ss_pred CC----CcceecCcccccccccCCCceeee---ecceEEEEeecCCCCCccCceEEEEEECCccceeeecCCCccccCCC
Q 045559 179 SD----NSWRNFQGFEFGMYDLDEVLDCTY---HNGACHWLVPFGAFHPLCCHYVILSFDMSDEVFEEILGPNCLLEISP 251 (335)
Q Consensus 179 ~~----~~W~~~~~~p~~~~~~~~~~~~v~---~~G~~ywl~~~~~~~~~~~~~~i~~fD~~~e~~~~i~~P~~~~~~~~ 251 (335)
.+ ..-+.+ .+.... .+ .++. .+|.+||.... ...|..+|+....-..+- .....
T Consensus 60 ~g~~~~~~~~~~--~~~~~~-~p---~glavd~~~~~ly~~d~~--------~~~I~~~~~~g~~~~~~~-~~~~~---- 120 (316)
T 1ijq_A 60 DRAHGVSSYDTV--ISRDIQ-AP---DGLAVDWIHSNIYWTDSV--------LGTVSVADTKGVKRKTLF-RENGS---- 120 (316)
T ss_dssp --------CEEE--ECSSCS-CC---CEEEEETTTTEEEEEETT--------TTEEEEEETTSSSEEEEE-ECTTC----
T ss_pred CCCCCCcccEEE--EeCCCC-Cc---CEEEEeecCCeEEEEECC--------CCEEEEEeCCCCceEEEE-ECCCC----
Confidence 54 111111 111111 11 2333 36899998654 347889998765443331 11111
Q ss_pred CeeEEEE--eCCeEEEEEecCCCCEEEEEEECCCCceeEEEEeccCCceeeeEEEe--e-CCEEEEEec-CCeEEEEeCC
Q 045559 252 KHTVFGL--YNDSLSFLVFDERESCFDIWTMKERYHWTKEFSTTPILAVDAPIGFW--K-NDTFFIRSN-TEELLLYDPN 325 (335)
Q Consensus 252 ~~~~l~~--~~g~L~~~~~~~~~~~~~IW~l~~~~~W~~~~~i~~~~~~~~~~~~~--~-~~~il~~~~-~~~l~~yd~~ 325 (335)
....++. .+|.|++..... ...|...-++. +-.+.. + ...+..|.++. . ++.+++... ..++.++|++
T Consensus 121 ~P~~iavdp~~g~ly~~d~~~-~~~I~~~~~dG--~~~~~~-~--~~~~~~P~gla~d~~~~~lY~~D~~~~~I~~~d~d 194 (316)
T 1ijq_A 121 KPRAIVVDPVHGFMYWTDWGT-PAKIKKGGLNG--VDIYSL-V--TENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVN 194 (316)
T ss_dssp CEEEEEEETTTTEEEEEECSS-SCEEEEEETTS--CCEEEE-E--CSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred CcceEEeCCCCCEEEEEccCC-CCeEEEEcCCC--CCeEEE-E--ECCCCCceEEEEeccCCEEEEEECCCCeEEEEecC
Confidence 1223444 367788776431 23443333443 212211 1 12334555543 2 356766554 5689999998
Q ss_pred CCceee
Q 045559 326 SEEIID 331 (335)
Q Consensus 326 ~~~~~~ 331 (335)
++..+.
T Consensus 195 g~~~~~ 200 (316)
T 1ijq_A 195 GGNRKT 200 (316)
T ss_dssp SCSCEE
T ss_pred CCceEE
Confidence 765544
No 95
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=74.84 E-value=33 Score=28.05 Aligned_cols=189 Identities=9% Similarity=0.017 Sum_probs=93.4
Q ss_pred cccceEEEeec-CceEEEEecchhhhhcCCCCcccCCcCCceeeeeEEeecCCCCCeEEEEEEEEecCccccccCCCceE
Q 045559 95 PFEGLFIMFIG-GDEIALYNHATRDLKFLPKLTLIDNLESIYTIMFGLGLDPKCNYYKLVYIVTYHDSELGKVLNDSRQV 173 (335)
Q Consensus 95 s~~GLl~~~~~-~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~l~~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~~ 173 (335)
..+|-+.+... ...++++||. ++...++.+... ....++.+|+.. ..- +.. ...-.+
T Consensus 70 ~~~g~l~v~~~~~~~v~~~d~~-g~~~~~~~~~~~-------~~~~~i~~~~~g-~l~---v~~----------~~~~~i 127 (300)
T 2qc5_A 70 SSLGDIWFTENGANKIGKLSKK-GGFTEYPLPQPD-------SGPYGITEGLNG-DIW---FTQ----------LNGDRI 127 (300)
T ss_dssp CTTSCEEEEETTTTEEEEECTT-SCEEEEECSSTT-------CCEEEEEECSTT-CEE---EEE----------TTTTEE
T ss_pred CCCCCEEEEecCCCeEEEECCC-CCeEEecCCCCC-------CCCccceECCCC-CEE---EEc----------cCCCeE
Confidence 35666665553 5678899988 665544322111 113566667533 222 111 112245
Q ss_pred EEEEcCCCcceecCcccccccccCCCceeee--ecceEEEEeecCCCCCccCceEEEEEECCccceeeecCCCccccCCC
Q 045559 174 FIYSFSDNSWRNFQGFEFGMYDLDEVLDCTY--HNGACHWLVPFGAFHPLCCHYVILSFDMSDEVFEEILGPNCLLEISP 251 (335)
Q Consensus 174 ~vyss~~~~W~~~~~~p~~~~~~~~~~~~v~--~~G~~ywl~~~~~~~~~~~~~~i~~fD~~~e~~~~i~~P~~~~~~~~ 251 (335)
..|+.. +...... .+.. ...+ .++. -+|.+|+... . ...|..||. +.++..+..|....
T Consensus 128 ~~~~~~-g~~~~~~-~~~~-~~~~---~~i~~d~~g~l~v~~~-~-------~~~i~~~~~-~g~~~~~~~~~~~~---- 188 (300)
T 2qc5_A 128 GKLTAD-GTIYEYD-LPNK-GSYP---AFITLGSDNALWFTEN-Q-------NNSIGRITN-TGKLEEYPLPTNAA---- 188 (300)
T ss_dssp EEECTT-SCEEEEE-CSST-TCCE---EEEEECTTSSEEEEET-T-------TTEEEEECT-TCCEEEEECSSTTC----
T ss_pred EEECCC-CCEEEcc-CCCC-CCCc---eeEEECCCCCEEEEec-C-------CCeEEEECC-CCcEEEeeCCCCCC----
Confidence 566655 4433221 1111 0111 1333 3577655443 2 237899998 56666565554321
Q ss_pred CeeEEEEe-CCeEEEEEecCCCCEEEEEEECCCCceeEEEEeccCCceeee--EEEeeCCEEEEEec-CCeEEEEeCCCC
Q 045559 252 KHTVFGLY-NDSLSFLVFDERESCFDIWTMKERYHWTKEFSTTPILAVDAP--IGFWKNDTFFIRSN-TEELLLYDPNSE 327 (335)
Q Consensus 252 ~~~~l~~~-~g~L~~~~~~~~~~~~~IW~l~~~~~W~~~~~i~~~~~~~~~--~~~~~~~~il~~~~-~~~l~~yd~~~~ 327 (335)
....++.. +|.|++.... ...+.+ ++....... +.+ + .....| +++.++|.+++... .+.+..||+ ++
T Consensus 189 ~~~~i~~d~~g~l~v~~~~--~~~i~~--~~~~g~~~~-~~~-~-~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g 260 (300)
T 2qc5_A 189 APVGITSGNDGALWFVEIM--GNKIGR--ITTTGEISE-YDI-P-TPNARPHAITAGKNSEIWFTEWGANQIGRITN-DN 260 (300)
T ss_dssp CEEEEEECTTSSEEEEETT--TTEEEE--ECTTCCEEE-EEC-S-STTCCEEEEEECSTTCEEEEETTTTEEEEECT-TS
T ss_pred CcceEEECCCCCEEEEccC--CCEEEE--EcCCCcEEE-EEC-C-CCCCCceEEEECCCCCEEEeccCCCeEEEECC-CC
Confidence 12234443 6778877654 344444 443233322 223 2 122334 44455678877764 478999999 45
Q ss_pred ceeec
Q 045559 328 EIIDF 332 (335)
Q Consensus 328 ~~~~v 332 (335)
++..+
T Consensus 261 ~~~~~ 265 (300)
T 2qc5_A 261 TIQEY 265 (300)
T ss_dssp CEEEE
T ss_pred cEEEE
Confidence 55543
No 96
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=74.65 E-value=54 Score=30.37 Aligned_cols=191 Identities=13% Similarity=0.111 Sum_probs=96.8
Q ss_pred ceEEEeecCceEEEEecchhhhhcCCCCcccCCcCCceeeeeEEeecCCCCCeEEEEEEEEecCccccccCCCceEEEEE
Q 045559 98 GLFIMFIGGDEIALYNHATRDLKFLPKLTLIDNLESIYTIMFGLGLDPKCNYYKLVYIVTYHDSELGKVLNDSRQVFIYS 177 (335)
Q Consensus 98 GLl~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~l~~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~~~vys 177 (335)
++++.........++|..|++.+.+...+. ..+.++|.. ++-+..... . .....+.+++
T Consensus 123 ~~~~~s~~~~~~~l~d~~~g~~~~l~~~~~-----------~~~~~spDG-~~la~~~~~--~-------~~~~~i~~~d 181 (582)
T 3o4h_A 123 AVVFTGATEDRVALYALDGGGLRELARLPG-----------FGFVSDIRG-DLIAGLGFF--G-------GGRVSLFTSN 181 (582)
T ss_dssp CEEEEEECSSCEEEEEEETTEEEEEEEESS-----------CEEEEEEET-TEEEEEEEE--E-------TTEEEEEEEE
T ss_pred eEEEEecCCCCceEEEccCCcEEEeecCCC-----------ceEEECCCC-CEEEEEEEc--C-------CCCeEEEEEc
Confidence 455555545556699999988776643211 344455533 333322211 1 1124578888
Q ss_pred cCCCcceecCcccccccccCCCceeeeecceEEEEeecCCCCCccCceEEEEEECCccceeeecCCCc-cccCC-CCeeE
Q 045559 178 FSDNSWRNFQGFEFGMYDLDEVLDCTYHNGACHWLVPFGAFHPLCCHYVILSFDMSDEVFEEILGPNC-LLEIS-PKHTV 255 (335)
Q Consensus 178 s~~~~W~~~~~~p~~~~~~~~~~~~v~~~G~~ywl~~~~~~~~~~~~~~i~~fD~~~e~~~~i~~P~~-~~~~~-~~~~~ 255 (335)
..++.++.+...+... .. ....-||...+...... ...|..+|+++.....+..... ..... .....
T Consensus 182 ~~~g~~~~l~~~~~~~-~~----~~~SpDG~~l~~~~~~~------~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (582)
T 3o4h_A 182 LSSGGLRVFDSGEGSF-SS----ASISPGMKVTAGLETAR------EARLVTVDPRDGSVEDLELPSKDFSSYRPTAITW 250 (582)
T ss_dssp TTTCCCEEECCSSCEE-EE----EEECTTSCEEEEEECSS------CEEEEEECTTTCCEEECCCSCSHHHHHCCSEEEE
T ss_pred CCCCCceEeecCCCcc-cc----ceECCCCCEEEEccCCC------eeEEEEEcCCCCcEEEccCCCcChhhhhhccccc
Confidence 8888888664222111 11 12233665433332221 3478999998877663222211 10000 00001
Q ss_pred E-EEeCCeEEEEEecCCCCEEEEEEECCCCceeEEEEeccCCceeeeEEEeeCCEEEEEe-cC---CeEEEEeCCCCcee
Q 045559 256 F-GLYNDSLSFLVFDERESCFDIWTMKERYHWTKEFSTTPILAVDAPIGFWKNDTFFIRS-NT---EELLLYDPNSEEII 330 (335)
Q Consensus 256 l-~~~~g~L~~~~~~~~~~~~~IW~l~~~~~W~~~~~i~~~~~~~~~~~~~~~~~il~~~-~~---~~l~~yd~~~~~~~ 330 (335)
. ..-+|.+.+.... ...+.||.+ . .... . +. ....-+.+. +|++++.. .. ..++.+|+++ +.+
T Consensus 251 ~~~spdg~~~~~~~~--~g~~~l~~~-g--~~~~---~-~~-~~v~~~~~s-dg~~l~~~s~~~~p~~l~~~d~~~-~~~ 318 (582)
T 3o4h_A 251 LGYLPDGRLAVVARR--EGRSAVFID-G--ERVE---A-PQ-GNHGRVVLW-RGKLVTSHTSLSTPPRIVSLPSGE-PLL 318 (582)
T ss_dssp EEECTTSCEEEEEEE--TTEEEEEET-T--EEEC---C-CS-SEEEEEEEE-TTEEEEEEEETTEEEEEEEETTCC-EEE
T ss_pred eeEcCCCcEEEEEEc--CCcEEEEEE-C--Ceec---c-CC-CceEEEEec-CCEEEEEEcCCCCCCeEEEEcCCC-ceE
Confidence 1 2336666555555 468999998 3 1111 2 22 223345556 88876543 22 4588999876 555
Q ss_pred ec
Q 045559 331 DF 332 (335)
Q Consensus 331 ~v 332 (335)
++
T Consensus 319 ~l 320 (582)
T 3o4h_A 319 EG 320 (582)
T ss_dssp CC
T ss_pred EE
Confidence 44
No 97
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=73.71 E-value=67 Score=31.02 Aligned_cols=114 Identities=12% Similarity=0.154 Sum_probs=64.1
Q ss_pred eecc-eEEEEeecCCCCCccCceEEEEEECCc--cceeeecCCCccccCCCCeeEEEEeCCeEEEEEecCCCCEEEEEEE
Q 045559 204 YHNG-ACHWLVPFGAFHPLCCHYVILSFDMSD--EVFEEILGPNCLLEISPKHTVFGLYNDSLSFLVFDERESCFDIWTM 280 (335)
Q Consensus 204 ~~~G-~~ywl~~~~~~~~~~~~~~i~~fD~~~--e~~~~i~~P~~~~~~~~~~~~l~~~~g~L~~~~~~~~~~~~~IW~l 280 (335)
.-+| .+|+.+..+.. ...|...|+.+ +.|..+- |.... .-..+...++.|.+.... .....||++
T Consensus 324 ~~dg~~l~~~s~~~~~-----~~~l~~~d~~~~~~~~~~l~-~~~~~----~l~~~~~~~~~lv~~~~~--dg~~~l~~~ 391 (741)
T 1yr2_A 324 DGVGDQLWFVSGDGAP-----LKKIVRVDLSGSTPRFDTVV-PESKD----NLESVGIAGNRLFASYIH--DAKSQVLAF 391 (741)
T ss_dssp EEETTEEEEEECTTCT-----TCEEEEEECSSSSCEEEEEE-CCCSS----EEEEEEEEBTEEEEEEEE--TTEEEEEEE
T ss_pred eccCCEEEEEECCCCC-----CCEEEEEeCCCCccccEEEe-cCCCC----eEEEEEEECCEEEEEEEE--CCEEEEEEE
Confidence 3344 57777654322 45799999987 5676652 22111 112234457777776665 456778888
Q ss_pred CCCCceeEEEEeccCCce--eeeEEEeeCCE-EEEEec----CCeEEEEeCCCCceeec
Q 045559 281 KERYHWTKEFSTTPILAV--DAPIGFWKNDT-FFIRSN----TEELLLYDPNSEEIIDF 332 (335)
Q Consensus 281 ~~~~~W~~~~~i~~~~~~--~~~~~~~~~~~-il~~~~----~~~l~~yd~~~~~~~~v 332 (335)
+-.+. ....+ .++.. ...+.+..+++ +++... ...++.||+++++.+.+
T Consensus 392 ~~~g~--~~~~l-~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~~~~l 447 (741)
T 1yr2_A 392 DLDGK--PAGAV-SLPGIGSASGLSGRPGDRHAYLSFSSFTQPATVLALDPATAKTTPW 447 (741)
T ss_dssp ETTSC--EEEEC-BCSSSCEEEEEECCBTCSCEEEEEEETTEEEEEEEEETTTTEEEEC
T ss_pred eCCCC--ceeec-cCCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCCcEEEE
Confidence 74122 33445 44322 23333344555 655433 35799999999886544
No 98
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=73.67 E-value=44 Score=28.94 Aligned_cols=186 Identities=10% Similarity=0.010 Sum_probs=94.5
Q ss_pred ccceEEEee-cCceEEEEecchhhhhcCCCCcccCCcCCceeeeeEEeecCCCCCeEEEEEEEEecCccccccCCCceEE
Q 045559 96 FEGLFIMFI-GGDEIALYNHATRDLKFLPKLTLIDNLESIYTIMFGLGLDPKCNYYKLVYIVTYHDSELGKVLNDSRQVF 174 (335)
Q Consensus 96 ~~GLl~~~~-~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~l~~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~~~ 174 (335)
.+|.|.... ....+..+++.++....+...... ...++++|+..+... .. . .....++
T Consensus 83 ~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~--------~p~glavd~~~g~ly--~~-d----------~~~~~I~ 141 (349)
T 3v64_C 83 RRELVFWSDVTLDRILRANLNGSNVEEVVSTGLE--------SPGGLAVDWVHDKLY--WT-D----------SGTSRIE 141 (349)
T ss_dssp TTTEEEEEETTTTEEEEEETTSCSCEEEECSSCS--------CCCEEEEETTTTEEE--EE-E----------TTTTEEE
T ss_pred cccEEEEEeccCCceEEEecCCCCceEEEeCCCC--------CccEEEEecCCCeEE--EE-c----------CCCCeEE
Confidence 456665554 355677777776654433222111 135778887554322 22 1 1234677
Q ss_pred EEEcCCCcceecCcccccccccCCCceeeee---cceEEEEeecCCCCCccCceEEEEEECCccceeeecCCCccccCCC
Q 045559 175 IYSFSDNSWRNFQGFEFGMYDLDEVLDCTYH---NGACHWLVPFGAFHPLCCHYVILSFDMSDEVFEEILGPNCLLEISP 251 (335)
Q Consensus 175 vyss~~~~W~~~~~~p~~~~~~~~~~~~v~~---~G~~ywl~~~~~~~~~~~~~~i~~fD~~~e~~~~i~~P~~~~~~~~ 251 (335)
+++..+..-+.+.. ... ..+ .++.+ +|.+||..... ...|.++|+....-..+- .....
T Consensus 142 ~~~~dG~~~~~l~~--~~l-~~P---~~iavdp~~g~ly~td~~~-------~~~I~r~~~dG~~~~~~~-~~~~~---- 203 (349)
T 3v64_C 142 VANLDGAHRKVLLW--QSL-EKP---RAIALHPMEGTIYWTDWGN-------TPRIEASSMDGSGRRIIA-DTHLF---- 203 (349)
T ss_dssp EEETTSCSCEEEEC--TTC-SCE---EEEEEETTTTEEEEEECSS-------SCEEEEEETTSCSCEESC-CSSCS----
T ss_pred EEcCCCCceEEEEe--CCC-CCc---ceEEEecCcCeEEEeccCC-------CCEEEEEeCCCCCcEEEE-ECCCC----
Confidence 77776543222210 001 111 23333 58999987643 257999998765433331 11111
Q ss_pred CeeEEEE--eCCeEEEEEecCCCCEEEEEEECCCCceeEEEEeccCCceeeeEEEe-eCCEEEEEe-cCCeEEEEeCCCC
Q 045559 252 KHTVFGL--YNDSLSFLVFDERESCFDIWTMKERYHWTKEFSTTPILAVDAPIGFW-KNDTFFIRS-NTEELLLYDPNSE 327 (335)
Q Consensus 252 ~~~~l~~--~~g~L~~~~~~~~~~~~~IW~l~~~~~W~~~~~i~~~~~~~~~~~~~-~~~~il~~~-~~~~l~~yd~~~~ 327 (335)
....|+. .+|.|+++... ...|...-++... .+. .+ ...+..|.++. .++.+++.. ..++|..+|..++
T Consensus 204 ~PnGla~d~~~~~lY~aD~~--~~~I~~~~~dG~~--~~~-~~--~~~~~~P~giav~~~~ly~td~~~~~V~~~~~~~G 276 (349)
T 3v64_C 204 WPNGLTIDYAGRRMYWVDAK--HHVIERANLDGSH--RKA-VI--SQGLPHPFAITVFEDSLYWTDWHTKSINSANKFTG 276 (349)
T ss_dssp CEEEEEEETTTTEEEEEETT--TTEEEEEETTSCS--CEE-EE--CSSCSSEEEEEEETTEEEEEETTTTEEEEEETTTC
T ss_pred CcceEEEeCCCCEEEEEECC--CCEEEEEeCCCCc--eEE-EE--eCCCCCceEEEEECCEEEEecCCCCeEEEEEccCC
Confidence 1223454 36779888765 4555554444311 111 12 12244666554 356676655 4678999995443
No 99
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=73.56 E-value=23 Score=29.84 Aligned_cols=94 Identities=6% Similarity=-0.003 Sum_probs=51.1
Q ss_pred eEEEEEECCcccee-eecCCCccccCCCCeeEEEE-eCCe-EEEEEecCCCCEEEEEEECCCCceeEEEEeccCCc----
Q 045559 225 YVILSFDMSDEVFE-EILGPNCLLEISPKHTVFGL-YNDS-LSFLVFDERESCFDIWTMKERYHWTKEFSTTPILA---- 297 (335)
Q Consensus 225 ~~i~~fD~~~e~~~-~i~~P~~~~~~~~~~~~l~~-~~g~-L~~~~~~~~~~~~~IW~l~~~~~W~~~~~i~~~~~---- 297 (335)
..|..+|+.+.+.. .+..+..... . .++. -+|+ +++.... ...+.+|-++. .. ....+ ....
T Consensus 21 ~~v~~~d~~~~~~~~~~~~~~~~~~---~--~~~~s~dg~~~~v~~~~--~~~i~~~d~~t-~~--~~~~~-~~~~~~~~ 89 (349)
T 1jmx_B 21 NNLHVVDVASDTVYKSCVMPDKFGP---G--TAMMAPDNRTAYVLNNH--YGDIYGIDLDT-CK--NTFHA-NLSSVPGE 89 (349)
T ss_dssp TEEEEEETTTTEEEEEEECSSCCSS---C--EEEECTTSSEEEEEETT--TTEEEEEETTT-TE--EEEEE-ESCCSTTE
T ss_pred CeEEEEECCCCcEEEEEecCCCCCC---c--eeEECCCCCEEEEEeCC--CCcEEEEeCCC-Cc--EEEEE-Eccccccc
Confidence 47889999876653 3455541110 1 2232 3565 5555433 56777777664 33 22334 2221
Q ss_pred ---eeeeEEEeeCCEE-EEEec------------CCeEEEEeCCCCce
Q 045559 298 ---VDAPIGFWKNDTF-FIRSN------------TEELLLYDPNSEEI 329 (335)
Q Consensus 298 ---~~~~~~~~~~~~i-l~~~~------------~~~l~~yd~~~~~~ 329 (335)
...-+.+.++|+. ++... ...+..||+++++.
T Consensus 90 ~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~ 137 (349)
T 1jmx_B 90 VGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLE 137 (349)
T ss_dssp EEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGG
T ss_pred ccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccc
Confidence 1334566678774 44442 36899999987543
No 100
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=73.25 E-value=14 Score=32.54 Aligned_cols=25 Identities=16% Similarity=0.115 Sum_probs=19.3
Q ss_pred ccceEEEeecCceEEEEecchhhhh
Q 045559 96 FEGLFIMFIGGDEIALYNHATRDLK 120 (335)
Q Consensus 96 ~~GLl~~~~~~~~~~V~NP~T~~~~ 120 (335)
.+|+|.+......++.+|+.|++.+
T Consensus 8 ~~~~v~~gs~dg~v~a~d~~tG~~~ 32 (369)
T 2hz6_A 8 PETLLFVSTLDGSLHAVSKRTGSIK 32 (369)
T ss_dssp CTTEEEEEETTSEEEEEETTTCCEE
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEE
Confidence 4677777776678899999998755
No 101
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=72.57 E-value=41 Score=28.10 Aligned_cols=99 Identities=12% Similarity=-0.041 Sum_probs=52.8
Q ss_pred eEEEEEECCccce-eee-cCCCccccCCCCeeEEEE-eCCe-EEEEEecCCCCEEEEEEECCCCceeEEEEeccCC----
Q 045559 225 YVILSFDMSDEVF-EEI-LGPNCLLEISPKHTVFGL-YNDS-LSFLVFDERESCFDIWTMKERYHWTKEFSTTPIL---- 296 (335)
Q Consensus 225 ~~i~~fD~~~e~~-~~i-~~P~~~~~~~~~~~~l~~-~~g~-L~~~~~~~~~~~~~IW~l~~~~~W~~~~~i~~~~---- 296 (335)
..|..+|+.+.+. ..+ .+|.... ...++. -+|+ |++.... ...+.+|-++. ........+ +..
T Consensus 198 ~~v~v~d~~~~~~~~~~~~~~~~~~-----~~~~~~spdg~~l~v~~~~--~~~i~~~d~~~-~~~~~~~~~-~~~~~~~ 268 (331)
T 3u4y_A 198 NSIGILETQNPENITLLNAVGTNNL-----PGTIVVSRDGSTVYVLTES--TVDVFNFNQLS-GTLSFVKSF-GHGLLID 268 (331)
T ss_dssp TEEEEEECSSTTSCEEEEEEECSSC-----CCCEEECTTSSEEEEECSS--EEEEEEEETTT-TEEEEEEEE-ECCCCCC
T ss_pred CeEEEEECCCCcccceeeeccCCCC-----CceEEECCCCCEEEEEEcC--CCEEEEEECCC-Cceeeeccc-ccccccC
Confidence 3688899887664 112 2222111 112232 3666 5554432 45676776664 444334444 211
Q ss_pred c----eeeeEEEeeCCEE-EEEec-CCeEEEEeCCCCceeec
Q 045559 297 A----VDAPIGFWKNDTF-FIRSN-TEELLLYDPNSEEIIDF 332 (335)
Q Consensus 297 ~----~~~~~~~~~~~~i-l~~~~-~~~l~~yd~~~~~~~~v 332 (335)
. ....+.+.++|+. ++... ++.+.+||++++....+
T Consensus 269 ~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~~~~ 310 (331)
T 3u4y_A 269 PRPLFGANQMALNKTETKLFISANISRELKVFTISGKVVGYV 310 (331)
T ss_dssp CGGGTTCCCEEECTTSSEEEEEETTTTEEEEEETTSCEEEEC
T ss_pred CCCcccccceEECCCCCEEEEecCCCCcEEEEEecCCcccce
Confidence 1 1123577778874 44443 56899999998876554
No 102
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=71.72 E-value=49 Score=28.55 Aligned_cols=188 Identities=7% Similarity=-0.047 Sum_probs=90.5
Q ss_pred cccceEEEeecCceEEEEecchhhhhcCCCCcccCCcCCceeeeeEEeecCCCCCeEEEEEEEEecCccccccCCCceEE
Q 045559 95 PFEGLFIMFIGGDEIALYNHATRDLKFLPKLTLIDNLESIYTIMFGLGLDPKCNYYKLVYIVTYHDSELGKVLNDSRQVF 174 (335)
Q Consensus 95 s~~GLl~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~l~~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~~~ 174 (335)
+-+|.++.......+.++|..+++....-.... .....+.+.+.. .+ ++... ..-.+.
T Consensus 215 ~~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~--------~~i~~~~~~~~~-~~-l~~~~------------~d~~i~ 272 (425)
T 1r5m_A 215 VDDDKFVIPGPKGAIFVYQITEKTPTGKLIGHH--------GPISVLEFNDTN-KL-LLSAS------------DDGTLR 272 (425)
T ss_dssp EETTEEEEECGGGCEEEEETTCSSCSEEECCCS--------SCEEEEEEETTT-TE-EEEEE------------TTSCEE
T ss_pred cCCCEEEEEcCCCeEEEEEcCCCceeeeeccCC--------CceEEEEECCCC-CE-EEEEc------------CCCEEE
Confidence 345666666667789999998865432211111 113456666643 32 22221 123578
Q ss_pred EEEcCCCcceec-CcccccccccCCCceeeeecceEEEEeecCCCCCccCceEEEEEECCccceeee-cCCCccccCCCC
Q 045559 175 IYSFSDNSWRNF-QGFEFGMYDLDEVLDCTYHNGACHWLVPFGAFHPLCCHYVILSFDMSDEVFEEI-LGPNCLLEISPK 252 (335)
Q Consensus 175 vyss~~~~W~~~-~~~p~~~~~~~~~~~~v~~~G~~ywl~~~~~~~~~~~~~~i~~fD~~~e~~~~i-~~P~~~~~~~~~ 252 (335)
+|+.+++.-... ......+.. ....-+| +.++... ...|..+|+.+.+.... ..... .
T Consensus 273 i~d~~~~~~~~~~~~~~~~i~~-----~~~~~~~--~l~~~~~-------d~~i~i~d~~~~~~~~~~~~~~~------~ 332 (425)
T 1r5m_A 273 IWHGGNGNSQNCFYGHSQSIVS-----ASWVGDD--KVISCSM-------DGSVRLWSLKQNTLLALSIVDGV------P 332 (425)
T ss_dssp EECSSSBSCSEEECCCSSCEEE-----EEEETTT--EEEEEET-------TSEEEEEETTTTEEEEEEECTTC------C
T ss_pred EEECCCCccceEecCCCccEEE-----EEECCCC--EEEEEeC-------CCcEEEEECCCCcEeEecccCCc------c
Confidence 888766432111 100001110 0122245 2222222 34788899876654332 22111 1
Q ss_pred eeEEEEe-CCeEEEEEecCCCCEEEEEEECC-C-----------C-----ceeEEEEeccCCc--eeeeEEEeeCCEEE-
Q 045559 253 HTVFGLY-NDSLSFLVFDERESCFDIWTMKE-R-----------Y-----HWTKEFSTTPILA--VDAPIGFWKNDTFF- 311 (335)
Q Consensus 253 ~~~l~~~-~g~L~~~~~~~~~~~~~IW~l~~-~-----------~-----~W~~~~~i~~~~~--~~~~~~~~~~~~il- 311 (335)
-..+... +|.+.++... .+.+.||-++. . . .+.....+..... ...-+.+.++++.+
T Consensus 333 i~~~~~s~~~~~l~~~~~--dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~ 410 (425)
T 1r5m_A 333 IFAGRISQDGQKYAVAFM--DGQVNVYDLKKLNSKSRSLYGNRDGILNPLPIPLYASYQSSQDNDYIFDLSWNCAGNKIS 410 (425)
T ss_dssp EEEEEECTTSSEEEEEET--TSCEEEEECHHHHC--------------CEECCEEEEECCTTCCCCEEEEEECTTSSEEE
T ss_pred EEEEEEcCCCCEEEEEEC--CCeEEEEECCCCccceeeeecccccccCcccchhhhhhcCcccCCceEEEEccCCCceEE
Confidence 1223322 4554444444 46788998875 1 0 0113444421211 34445556677755
Q ss_pred EEecCCeEEEEeCCC
Q 045559 312 IRSNTEELLLYDPNS 326 (335)
Q Consensus 312 ~~~~~~~l~~yd~~~ 326 (335)
....++.+..||++.
T Consensus 411 ~~~~dg~i~iw~~~g 425 (425)
T 1r5m_A 411 VAYSLQEGSVVAIPG 425 (425)
T ss_dssp EEESSSCCEEEECCC
T ss_pred EEecCceEEEEeecC
Confidence 455677899999863
No 103
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=70.97 E-value=47 Score=28.11 Aligned_cols=68 Identities=15% Similarity=0.155 Sum_probs=39.3
Q ss_pred CeEEEEEecCCCCEEEEEEECC-CCceeEEEEecc--CCceeeeEEEeeCCEEE-EEecCCeEEEEeCC-CCceee
Q 045559 261 DSLSFLVFDERESCFDIWTMKE-RYHWTKEFSTTP--ILAVDAPIGFWKNDTFF-IRSNTEELLLYDPN-SEEIID 331 (335)
Q Consensus 261 g~L~~~~~~~~~~~~~IW~l~~-~~~W~~~~~i~~--~~~~~~~~~~~~~~~il-~~~~~~~l~~yd~~-~~~~~~ 331 (335)
|.+.+.... ...+.||-++. ...+.. ..... ......-+.+.++|+++ ....++.+..||.+ .++|+.
T Consensus 221 ~~~l~s~~~--dg~i~iwd~~~~~~~~~~-~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~~~~~~~~ 293 (379)
T 3jrp_A 221 RSYLASVSQ--DRTCIIWTQDNEQGPWKK-TLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENLEGKWEP 293 (379)
T ss_dssp SEEEEEEET--TSCEEEEEESSTTSCCEE-EESSSSCCSSCEEEEEECSSSCCEEEEESSSSEEEEEEEETTEEEE
T ss_pred CCeEEEEeC--CCEEEEEeCCCCCcccee-eeeccccCCCcEEEEEEcCCCCEEEEecCCCcEEEEeCCCCCcccc
Confidence 565555554 56799999997 333322 22211 22224445666788854 45567789999987 344443
No 104
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=70.82 E-value=50 Score=28.27 Aligned_cols=105 Identities=11% Similarity=0.021 Sum_probs=57.7
Q ss_pred cceEEEEeecCCCCCccCceEEEEEECCccceeeecCCCccccCCCCeeEEEEe--CCeEEEEEecCCCCEEEEEEECCC
Q 045559 206 NGACHWLVPFGAFHPLCCHYVILSFDMSDEVFEEILGPNCLLEISPKHTVFGLY--NDSLSFLVFDERESCFDIWTMKER 283 (335)
Q Consensus 206 ~G~~ywl~~~~~~~~~~~~~~i~~fD~~~e~~~~i~~P~~~~~~~~~~~~l~~~--~g~L~~~~~~~~~~~~~IW~l~~~ 283 (335)
+|.+||..... ...|.++|+....-..+- ..... ....|+.. +|+|+++... ...|...-++..
T Consensus 133 ~g~ly~td~~~-------~~~I~r~~~dG~~~~~~~-~~~l~----~Pnglavd~~~~~lY~aD~~--~~~I~~~d~dG~ 198 (318)
T 3sov_A 133 SGFMYWTDWGE-------VPKIERAGMDGSSRFIII-NSEIY----WPNGLTLDYEEQKLYWADAK--LNFIHKSNLDGT 198 (318)
T ss_dssp GTEEEEEECSS-------SCEEEEEETTSCSCEEEE-CSSCS----CEEEEEEETTTTEEEEEETT--TTEEEEEETTSC
T ss_pred CCEEEEEecCC-------CCEEEEEEcCCCCeEEEE-ECCCC----CccEEEEeccCCEEEEEECC--CCEEEEEcCCCC
Confidence 58999986432 347999998754333221 11111 12234544 6779888765 455555545431
Q ss_pred CceeEEEEeccCCceeeeEEEee-CCEEEEEe-cCCeEEEEeCCCCce
Q 045559 284 YHWTKEFSTTPILAVDAPIGFWK-NDTFFIRS-NTEELLLYDPNSEEI 329 (335)
Q Consensus 284 ~~W~~~~~i~~~~~~~~~~~~~~-~~~il~~~-~~~~l~~yd~~~~~~ 329 (335)
. .+ .+ --..+..|.++.- .+.++... ...++..+|+.+++.
T Consensus 199 ~--~~--~~-~~~~~~~P~glav~~~~lywtd~~~~~V~~~~~~~G~~ 241 (318)
T 3sov_A 199 N--RQ--AV-VKGSLPHPFALTLFEDILYWTDWSTHSILACNKYTGEG 241 (318)
T ss_dssp S--CE--EE-ECSCCSCEEEEEEETTEEEEEETTTTEEEEEETTTCCS
T ss_pred c--eE--EE-ecCCCCCceEEEEeCCEEEEEecCCCeEEEEECCCCCc
Confidence 1 12 22 1123456777654 44566554 467899999965543
No 105
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=70.66 E-value=51 Score=28.37 Aligned_cols=194 Identities=9% Similarity=-0.018 Sum_probs=84.6
Q ss_pred cccceEEEeecCceEEEEecchhhhhcCCCCcccCCcCCceeeeeEEeecCCCCCeEEEEEEEEecCccccccCCCceEE
Q 045559 95 PFEGLFIMFIGGDEIALYNHATRDLKFLPKLTLIDNLESIYTIMFGLGLDPKCNYYKLVYIVTYHDSELGKVLNDSRQVF 174 (335)
Q Consensus 95 s~~GLl~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~l~~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~~~ 174 (335)
+.+|-++.......+.|||..+++.......... . .......+.+.|.. .+-+ ... ..-.+.
T Consensus 103 s~d~~~l~~s~dg~v~lWd~~~~~~~~~~~~~~~-~---h~~~V~~v~~spdg-~~l~-sgs------------~dg~v~ 164 (357)
T 4g56_B 103 VSEKGILVASDSGAVELWEILEKESLLVNKFAKY-E---HDDIVKTLSVFSDG-TQAV-SGG------------KDFSVK 164 (357)
T ss_dssp ETTTEEEEEETTSCEEEC--------CCCCEEEC-C---CSSCEEEEEECSSS-SEEE-EEE------------TTSCEE
T ss_pred cCCCCEEEEECCCEEEEeeccccceeEEEeeccC-C---CCCCEEEEEECCCC-CEEE-EEe------------CCCeEE
Confidence 3355555555577899999999876554443221 0 01114556666643 3322 221 123577
Q ss_pred EEEcCCCcceec-CcccccccccCCCceeee--ecce-EEEEeecCCCCCccCceEEEEEECCccceeee-cCCCccccC
Q 045559 175 IYSFSDNSWRNF-QGFEFGMYDLDEVLDCTY--HNGA-CHWLVPFGAFHPLCCHYVILSFDMSDEVFEEI-LGPNCLLEI 249 (335)
Q Consensus 175 vyss~~~~W~~~-~~~p~~~~~~~~~~~~v~--~~G~-~ywl~~~~~~~~~~~~~~i~~fD~~~e~~~~i-~~P~~~~~~ 249 (335)
+++.+++.-... ......+ .++. -+|. +...+.. ...|..+|+++.+.... .......
T Consensus 165 iwd~~~~~~~~~~~~h~~~v-------~~v~~s~~~~~~~~s~~~--------dg~v~~wd~~~~~~~~~~~~~~~~~-- 227 (357)
T 4g56_B 165 VWDLSQKAVLKSYNAHSSEV-------NCVAACPGKDTIFLSCGE--------DGRILLWDTRKPKPATRIDFCASDT-- 227 (357)
T ss_dssp EEETTTTEEEEEECCCSSCE-------EEEEECTTCSSCEEEEET--------TSCEEECCTTSSSCBCBCCCTTCCS--
T ss_pred EEECCCCcEEEEEcCCCCCE-------EEEEEccCCCceeeeecc--------CCceEEEECCCCceeeeeeeccccc--
Confidence 888776542211 1000000 1111 1222 2222221 22466778766543222 2221110
Q ss_pred CCCeeEEEEe--CCeEEEEEecCCCCEEEEEEECCCCceeEEEEeccCCceeeeEEEeeCC-EEEE-EecCCeEEEEeCC
Q 045559 250 SPKHTVFGLY--NDSLSFLVFDERESCFDIWTMKERYHWTKEFSTTPILAVDAPIGFWKND-TFFI-RSNTEELLLYDPN 325 (335)
Q Consensus 250 ~~~~~~l~~~--~g~L~~~~~~~~~~~~~IW~l~~~~~W~~~~~i~~~~~~~~~~~~~~~~-~il~-~~~~~~l~~yd~~ 325 (335)
.-..+.-. ++.+.+.... ...+.||-+.. .. ...++.....-..-+.+.+++ .++. ...++.+.+||.+
T Consensus 228 --~v~~v~~sp~~~~~la~g~~--d~~i~~wd~~~-~~--~~~~~~~~~~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~ 300 (357)
T 4g56_B 228 --IPTSVTWHPEKDDTFACGDE--TGNVSLVNIKN-PD--SAQTSAVHSQNITGLAYSYHSSPFLASISEDCTVAVLDAD 300 (357)
T ss_dssp --CEEEEEECTTSTTEEEEEES--SSCEEEEESSC-GG--GCEEECCCSSCEEEEEECSSSSCCEEEEETTSCEEEECTT
T ss_pred --cccchhhhhcccceEEEeec--ccceeEEECCC-Cc--EeEEEeccceeEEEEEEcCCCCCEEEEEeCCCEEEEEECC
Confidence 12223332 3445444444 46799998876 21 122231122223445555665 4544 3456789999998
Q ss_pred CCcee
Q 045559 326 SEEII 330 (335)
Q Consensus 326 ~~~~~ 330 (335)
+++..
T Consensus 301 ~~~~~ 305 (357)
T 4g56_B 301 FSEVF 305 (357)
T ss_dssp SCEEE
T ss_pred CCcEe
Confidence 87764
No 106
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=70.42 E-value=47 Score=27.89 Aligned_cols=132 Identities=7% Similarity=-0.065 Sum_probs=75.9
Q ss_pred EEEEEcCCCcceecCcccccccccCCCceeeeecceEEEEeecCCCCCccCceEEEEEECCccce-eeecCCCccccCCC
Q 045559 173 VFIYSFSDNSWRNFQGFEFGMYDLDEVLDCTYHNGACHWLVPFGAFHPLCCHYVILSFDMSDEVF-EEILGPNCLLEISP 251 (335)
Q Consensus 173 ~~vyss~~~~W~~~~~~p~~~~~~~~~~~~v~~~G~~ywl~~~~~~~~~~~~~~i~~fD~~~e~~-~~i~~P~~~~~~~~ 251 (335)
+.+++.++++=.... ++-..+. ..-...++.+|-++.. ...+..||.++.+- ..++.++.
T Consensus 77 v~~iD~~Tgkv~~~~-l~~~~Fg----eGit~~g~~Ly~ltw~--------~~~v~V~D~~Tl~~~~ti~~~~e------ 137 (268)
T 3nok_A 77 LRQLSLESAQPVWME-RLGNIFA----EGLASDGERLYQLTWT--------EGLLFTWSGMPPQRERTTRYSGE------ 137 (268)
T ss_dssp EEECCSSCSSCSEEE-ECTTCCE----EEEEECSSCEEEEESS--------SCEEEEEETTTTEEEEEEECSSC------
T ss_pred EEEEECCCCcEEeEE-CCCCcce----eEEEEeCCEEEEEEcc--------CCEEEEEECCcCcEEEEEeCCCc------
Confidence 788888876422111 2111111 1234556778888775 44899999987544 44565532
Q ss_pred CeeEEEEeCCeEEEEEecCCCCEEEEEEECCCCceeEEEEeccCCc----eeeeEEE-eeCCEEEEEe-cCCeEEEEeCC
Q 045559 252 KHTVFGLYNDSLSFLVFDERESCFDIWTMKERYHWTKEFSTTPILA----VDAPIGF-WKNDTFFIRS-NTEELLLYDPN 325 (335)
Q Consensus 252 ~~~~l~~~~g~L~~~~~~~~~~~~~IW~l~~~~~W~~~~~i~~~~~----~~~~~~~-~~~~~il~~~-~~~~l~~yd~~ 325 (335)
...|+.-++.|++... .+ .|+.+|. ..=..+.+| +... +..+..+ +.+|+++... ..+.+.+-|++
T Consensus 138 -GwGLt~Dg~~L~vSdG---s~--~l~~iDp-~T~~v~~~I-~V~~~g~~v~~lNeLe~~dG~lyanvw~s~~I~vIDp~ 209 (268)
T 3nok_A 138 -GWGLCYWNGKLVRSDG---GT--MLTFHEP-DGFALVGAV-QVKLRGQPVELINELECANGVIYANIWHSSDVLEIDPA 209 (268)
T ss_dssp -CCCEEEETTEEEEECS---SS--EEEEECT-TTCCEEEEE-ECEETTEECCCEEEEEEETTEEEEEETTCSEEEEECTT
T ss_pred -eeEEecCCCEEEEECC---CC--EEEEEcC-CCCeEEEEE-EeCCCCcccccccccEEeCCEEEEEECCCCeEEEEeCC
Confidence 2235656667888763 23 5788886 222344455 3321 1111111 2378888765 46789999999
Q ss_pred CCceee
Q 045559 326 SEEIID 331 (335)
Q Consensus 326 ~~~~~~ 331 (335)
+++..+
T Consensus 210 TG~V~~ 215 (268)
T 3nok_A 210 TGTVVG 215 (268)
T ss_dssp TCBEEE
T ss_pred CCcEEE
Confidence 988743
No 107
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=70.36 E-value=46 Score=27.72 Aligned_cols=105 Identities=8% Similarity=-0.039 Sum_probs=56.8
Q ss_pred eeee--cceEEEEeecCCCCCccCceEEEEEECCccceeeecCCCccccCCCCeeEEEE-eCCeEEEEEecCCCCEEEEE
Q 045559 202 CTYH--NGACHWLVPFGAFHPLCCHYVILSFDMSDEVFEEILGPNCLLEISPKHTVFGL-YNDSLSFLVFDERESCFDIW 278 (335)
Q Consensus 202 ~v~~--~G~~ywl~~~~~~~~~~~~~~i~~fD~~~e~~~~i~~P~~~~~~~~~~~~l~~-~~g~L~~~~~~~~~~~~~IW 278 (335)
+++. +|.+||.... ...|..+|..+.....+..|... ..++. -+|+|.+.. ...+.+|
T Consensus 18 p~w~~~~~~l~~~d~~--------~~~i~~~d~~~~~~~~~~~~~~~-------~~i~~~~dG~l~v~~----~~~l~~~ 78 (297)
T 3g4e_A 18 PVWEEVSNSLLFVDIP--------AKKVCRWDSFTKQVQRVTMDAPV-------SSVALRQSGGYVATI----GTKFCAL 78 (297)
T ss_dssp EEEETTTTEEEEEETT--------TTEEEEEETTTCCEEEEECSSCE-------EEEEEBTTSSEEEEE----TTEEEEE
T ss_pred CeEECCCCEEEEEECC--------CCEEEEEECCCCcEEEEeCCCce-------EEEEECCCCCEEEEE----CCeEEEE
Confidence 4444 4789998764 34799999988877666555322 12333 366655543 2344444
Q ss_pred EECCCCceeEEEEeccCCceeee--EEEeeCCEEEEEec------------CCeEEEEeCCC
Q 045559 279 TMKERYHWTKEFSTTPILAVDAP--IGFWKNDTFFIRSN------------TEELLLYDPNS 326 (335)
Q Consensus 279 ~l~~~~~W~~~~~i~~~~~~~~~--~~~~~~~~il~~~~------------~~~l~~yd~~~ 326 (335)
-.+. ..+........-....+| +.+.++|++++... ...|+.+|++.
T Consensus 79 d~~~-g~~~~~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g 139 (297)
T 3g4e_A 79 NWKE-QSAVVLATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDH 139 (297)
T ss_dssp ETTT-TEEEEEEECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTS
T ss_pred ECCC-CcEEEEEecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCC
Confidence 4433 555444333111112223 34456788777541 23688888763
No 108
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=69.53 E-value=78 Score=30.03 Aligned_cols=189 Identities=10% Similarity=0.007 Sum_probs=93.9
Q ss_pred ceEEEEecchhhhhcCCCCcccCCcCCceeeeeEEeecCCCCCeEEEEEEEEecCccccccCCCceEEEEEcCCC-ccee
Q 045559 107 DEIALYNHATRDLKFLPKLTLIDNLESIYTIMFGLGLDPKCNYYKLVYIVTYHDSELGKVLNDSRQVFIYSFSDN-SWRN 185 (335)
Q Consensus 107 ~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~l~~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~~~vyss~~~-~W~~ 185 (335)
..++++|..|++...+...... ......+.+.|.. ++-++... .. ......+.+++..++ ..+.
T Consensus 235 ~~l~~~d~~~~~~~~~~~~~~~------~~~~~~~~~spdg-~~l~~~~~---~~-----~~~~~~v~~~d~~~g~~~~~ 299 (706)
T 2z3z_A 235 VTVGIYHLATGKTVYLQTGEPK------EKFLTNLSWSPDE-NILYVAEV---NR-----AQNECKVNAYDAETGRFVRT 299 (706)
T ss_dssp EEEEEEETTTTEEEECCCCSCT------TCEEEEEEECTTS-SEEEEEEE---CT-----TSCEEEEEEEETTTCCEEEE
T ss_pred eEEEEEECCCCceEeeccCCCC------ceeEeeEEEECCC-CEEEEEEe---CC-----CCCeeEEEEEECCCCceeeE
Confidence 5689999999887666432111 0113455566543 33322221 11 123456777888777 5654
Q ss_pred cCccccc--ccccCCCceeeee--cceEEEEeecCCCCCccCceEEEEEECCccceeeecCCCccccCCCCeeE-EEEe-
Q 045559 186 FQGFEFG--MYDLDEVLDCTYH--NGACHWLVPFGAFHPLCCHYVILSFDMSDEVFEEILGPNCLLEISPKHTV-FGLY- 259 (335)
Q Consensus 186 ~~~~p~~--~~~~~~~~~~v~~--~G~~ywl~~~~~~~~~~~~~~i~~fD~~~e~~~~i~~P~~~~~~~~~~~~-l~~~- 259 (335)
+...... ..... .....- +|.+.+.+..+. ...|..+|...+....+..... .... ++..
T Consensus 300 ~~~~~~~~~~~~~~--~~~~sp~~dg~~l~~~~~~g------~~~l~~~~~~~~~~~~l~~~~~------~v~~~~~~sp 365 (706)
T 2z3z_A 300 LFVETDKHYVEPLH--PLTFLPGSNNQFIWQSRRDG------WNHLYLYDTTGRLIRQVTKGEW------EVTNFAGFDP 365 (706)
T ss_dssp EEEEECSSCCCCCS--CCEECTTCSSEEEEEECTTS------SCEEEEEETTSCEEEECCCSSS------CEEEEEEECT
T ss_pred EEEccCCCeECccC--CceeecCCCCEEEEEEccCC------ccEEEEEECCCCEEEecCCCCe------EEEeeeEEcC
Confidence 4211111 00001 012222 787666554432 4578888876665555522111 1111 2322
Q ss_pred CCe-EEEEEecCCCCEEEEEEECC-CCceeEEEEeccCCceeeeEEEeeCCEE-EEEec----CCeEEEEeCCCCc
Q 045559 260 NDS-LSFLVFDERESCFDIWTMKE-RYHWTKEFSTTPILAVDAPIGFWKNDTF-FIRSN----TEELLLYDPNSEE 328 (335)
Q Consensus 260 ~g~-L~~~~~~~~~~~~~IW~l~~-~~~W~~~~~i~~~~~~~~~~~~~~~~~i-l~~~~----~~~l~~yd~~~~~ 328 (335)
+|+ |++...........||.++. .... ..+ ....-..-+.+.++|+. ++... ...+..+|+++++
T Consensus 366 dg~~l~~~~~~~~~~~~~l~~~d~~~~~~---~~l-~~~~~~~~~~~spdg~~l~~~~~~~~~p~~i~l~d~~~~~ 437 (706)
T 2z3z_A 366 KGTRLYFESTEASPLERHFYCIDIKGGKT---KDL-TPESGMHRTQLSPDGSAIIDIFQSPTVPRKVTVTNIGKGS 437 (706)
T ss_dssp TSSEEEEEESSSCTTCBEEEEEETTCCCC---EES-CCSSSEEEEEECTTSSEEEEEEECSSCSCEEEEEESSSCE
T ss_pred CCCEEEEEecCCCCceEEEEEEEcCCCCc---eec-cCCCceEEEEECCCCCEEEEEecCCCCCcEEEEEECCCCe
Confidence 554 66655543223567777765 2332 233 22222334566778874 44332 1469999998876
No 109
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=69.46 E-value=45 Score=27.28 Aligned_cols=188 Identities=13% Similarity=0.121 Sum_probs=95.0
Q ss_pred cccceEEEeec--CceEEEEecchhhhhcCCCCcccCCcCCceeeeeEEeecCCCCCeEEEEEEEEecCccccccCCCce
Q 045559 95 PFEGLFIMFIG--GDEIALYNHATRDLKFLPKLTLIDNLESIYTIMFGLGLDPKCNYYKLVYIVTYHDSELGKVLNDSRQ 172 (335)
Q Consensus 95 s~~GLl~~~~~--~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~l~~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~ 172 (335)
..+|-+.+... ...+.++|+..+....+...... ...++.+|+.. . ++.. . .....
T Consensus 86 ~~~g~l~v~~~~~~~~i~~~d~~g~~~~~~~~~~~~--------~~~~i~~~~~g-~--l~v~-~----------~~~~~ 143 (286)
T 1q7f_A 86 RNSGDIIVTERSPTHQIQIYNQYGQFVRKFGATILQ--------HPRGVTVDNKG-R--IIVV-E----------CKVMR 143 (286)
T ss_dssp TTTTEEEEEECGGGCEEEEECTTSCEEEEECTTTCS--------CEEEEEECTTS-C--EEEE-E----------TTTTE
T ss_pred cCCCeEEEEcCCCCCEEEEECCCCcEEEEecCccCC--------CceEEEEeCCC-C--EEEE-E----------CCCCE
Confidence 34666666552 56788888654443334322111 13567777743 2 2222 1 11335
Q ss_pred EEEEEcCCCcceecCcccccccccCCCceeeee--cceEEEEeecCCCCCccCceEEEEEECCccceeeecCCCccccCC
Q 045559 173 VFIYSFSDNSWRNFQGFEFGMYDLDEVLDCTYH--NGACHWLVPFGAFHPLCCHYVILSFDMSDEVFEEILGPNCLLEIS 250 (335)
Q Consensus 173 ~~vyss~~~~W~~~~~~p~~~~~~~~~~~~v~~--~G~~ywl~~~~~~~~~~~~~~i~~fD~~~e~~~~i~~P~~~~~~~ 250 (335)
+.+|+..+..-+..... .....+ .++.+ +|.+|..... ...|..||...+....+..+....
T Consensus 144 i~~~~~~g~~~~~~~~~--~~~~~p---~~i~~~~~g~l~v~~~~--------~~~i~~~~~~g~~~~~~~~~g~~~--- 207 (286)
T 1q7f_A 144 VIIFDQNGNVLHKFGCS--KHLEFP---NGVVVNDKQEIFISDNR--------AHCVKVFNYEGQYLRQIGGEGITN--- 207 (286)
T ss_dssp EEEECTTSCEEEEEECT--TTCSSE---EEEEECSSSEEEEEEGG--------GTEEEEEETTCCEEEEESCTTTSC---
T ss_pred EEEEcCCCCEEEEeCCC--CccCCc---EEEEECCCCCEEEEECC--------CCEEEEEcCCCCEEEEEccCCccC---
Confidence 67777544332222110 000111 23333 4776654432 347999998776555554332111
Q ss_pred CCeeEEEE-eCCeEEEEEecCCCC-EEEEEEECCCCceeEEEEeccCC-ceeeeEEEeeCCEEEEEecCCeEEEEeCCC
Q 045559 251 PKHTVFGL-YNDSLSFLVFDERES-CFDIWTMKERYHWTKEFSTTPIL-AVDAPIGFWKNDTFFIRSNTEELLLYDPNS 326 (335)
Q Consensus 251 ~~~~~l~~-~~g~L~~~~~~~~~~-~~~IW~l~~~~~W~~~~~i~~~~-~~~~~~~~~~~~~il~~~~~~~l~~yd~~~ 326 (335)
....++. -+|.|++.... .+ .+.+|-.+ ..-...... ... ....-+++.++|++++...++.+.+|+...
T Consensus 208 -~p~~i~~d~~G~l~v~~~~--~~~~i~~~~~~--g~~~~~~~~-~~~~~~~~~i~~~~~g~l~vs~~~~~v~v~~~~~ 280 (286)
T 1q7f_A 208 -YPIGVGINSNGEILIADNH--NNFNLTIFTQD--GQLISALES-KVKHAQCFDVALMDDGSVVLASKDYRLYIYRYVQ 280 (286)
T ss_dssp -SEEEEEECTTCCEEEEECS--SSCEEEEECTT--SCEEEEEEE-SSCCSCEEEEEEETTTEEEEEETTTEEEEEECSC
T ss_pred -CCcEEEECCCCCEEEEeCC--CCEEEEEECCC--CCEEEEEcc-cCCCCcceeEEECCCCcEEEECCCCeEEEEEccc
Confidence 1223444 36778887765 33 77777533 222222222 111 113345566789988877677899998754
No 110
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=69.15 E-value=48 Score=29.77 Aligned_cols=107 Identities=10% Similarity=0.003 Sum_probs=59.7
Q ss_pred cceEEEEeecCCCCCccCceEEEEEECCccceeeecCCCccccCCCCeeEEEE-eCCe-EEEEEecCC-CCEEEEEEECC
Q 045559 206 NGACHWLVPFGAFHPLCCHYVILSFDMSDEVFEEILGPNCLLEISPKHTVFGL-YNDS-LSFLVFDER-ESCFDIWTMKE 282 (335)
Q Consensus 206 ~G~~ywl~~~~~~~~~~~~~~i~~fD~~~e~~~~i~~P~~~~~~~~~~~~l~~-~~g~-L~~~~~~~~-~~~~~IW~l~~ 282 (335)
+|.+|+.... ..|..||+++.....+..+.. ....++. .+|+ |++...... .....+|...+
T Consensus 149 ~g~Lyv~d~~---------~~I~~id~~~~~v~~~~~~~~------~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~~ 213 (430)
T 3tc9_A 149 HNHLYLVGEQ---------HPTRLIDFEKEYVSTVYSGLS------KVRTICWTHEADSMIITNDQNNNDRPNNYILTRE 213 (430)
T ss_dssp EEEEEEEEBT---------EEEEEEETTTTEEEEEECCCS------CEEEEEECTTSSEEEEEECCSCTTSEEEEEEEGG
T ss_pred CCeEEEEeCC---------CcEEEEECCCCEEEEEecCCC------CcceEEEeCCCCEEEEEeCCCCcccceEEEEeCC
Confidence 4788887652 379999999887766632111 1223443 3555 777776421 23344555544
Q ss_pred CCceeEEEEeccCCceeeeEEEee-CCEEEEEe-cCCeEEEEeCCCCce
Q 045559 283 RYHWTKEFSTTPILAVDAPIGFWK-NDTFFIRS-NTEELLLYDPNSEEI 329 (335)
Q Consensus 283 ~~~W~~~~~i~~~~~~~~~~~~~~-~~~il~~~-~~~~l~~yd~~~~~~ 329 (335)
..|.....+..+. ...-+++.+ +|.+++.. ...+++.||+++++.
T Consensus 214 -g~~~~~~~l~~~~-~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~ 260 (430)
T 3tc9_A 214 -SGFKVITELTKGQ-NCNGAETHPINGELYFNSWNAGQVFRYDFTTQET 260 (430)
T ss_dssp -GTSCSEEEEEECS-SCCCEEECTTTCCEEEEETTTTEEEEEETTTTEE
T ss_pred -CceeeeeeeccCC-CceEEEEeCCCCEEEEEECCCCEEEEEECCCCcE
Confidence 4444222231111 122334555 57777765 456899999988765
No 111
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=68.75 E-value=57 Score=28.11 Aligned_cols=95 Identities=11% Similarity=0.133 Sum_probs=51.4
Q ss_pred eEEEEEECCccceeee-cCCCccccCCCCeeEEEEe-CCeEEEEEecCCCCEEEEEEECCCCceeEEEEeccCCceeeeE
Q 045559 225 YVILSFDMSDEVFEEI-LGPNCLLEISPKHTVFGLY-NDSLSFLVFDERESCFDIWTMKERYHWTKEFSTTPILAVDAPI 302 (335)
Q Consensus 225 ~~i~~fD~~~e~~~~i-~~P~~~~~~~~~~~~l~~~-~g~L~~~~~~~~~~~~~IW~l~~~~~W~~~~~i~~~~~~~~~~ 302 (335)
..|..+|+.+.+.... ..... .-..+... +|.+.+.... ...+.||-++. ..-. ..+........-+
T Consensus 227 g~i~~~d~~~~~~~~~~~~~~~------~i~~~~~~~~~~~l~~~~~--d~~i~i~d~~~-~~~~--~~~~~~~~~i~~~ 295 (425)
T 1r5m_A 227 GAIFVYQITEKTPTGKLIGHHG------PISVLEFNDTNKLLLSASD--DGTLRIWHGGN-GNSQ--NCFYGHSQSIVSA 295 (425)
T ss_dssp GCEEEEETTCSSCSEEECCCSS------CEEEEEEETTTTEEEEEET--TSCEEEECSSS-BSCS--EEECCCSSCEEEE
T ss_pred CeEEEEEcCCCceeeeeccCCC------ceEEEEECCCCCEEEEEcC--CCEEEEEECCC-Cccc--eEecCCCccEEEE
Confidence 4688899887644322 21111 12233333 5554444443 56799998876 2212 2231223233445
Q ss_pred EEeeCCEEEEEecCCeEEEEeCCCCcee
Q 045559 303 GFWKNDTFFIRSNTEELLLYDPNSEEII 330 (335)
Q Consensus 303 ~~~~~~~il~~~~~~~l~~yd~~~~~~~ 330 (335)
.+.+++.++....++.+..||+++++..
T Consensus 296 ~~~~~~~l~~~~~d~~i~i~d~~~~~~~ 323 (425)
T 1r5m_A 296 SWVGDDKVISCSMDGSVRLWSLKQNTLL 323 (425)
T ss_dssp EEETTTEEEEEETTSEEEEEETTTTEEE
T ss_pred EECCCCEEEEEeCCCcEEEEECCCCcEe
Confidence 5566774455566778999999876643
No 112
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=68.20 E-value=85 Score=29.96 Aligned_cols=189 Identities=11% Similarity=0.065 Sum_probs=95.2
Q ss_pred eEEEEecchhhhh--cCCCCcccCCcCCceeeeeEEeecCCCCCeEEEEEEEEecCccccccCCCceEEEEEcCCCccee
Q 045559 108 EIALYNHATRDLK--FLPKLTLIDNLESIYTIMFGLGLDPKCNYYKLVYIVTYHDSELGKVLNDSRQVFIYSFSDNSWRN 185 (335)
Q Consensus 108 ~~~V~NP~T~~~~--~LP~~~~~~~~~~~~~~~~~l~~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~~~vyss~~~~W~~ 185 (335)
.+++++..|++-. .+-..+.. ........+++.. .|-++.... . .....+.+.+..++.|+.
T Consensus 203 ~v~~~~l~t~~~~~~lv~~~~~~------~~~~~~~~~SpDG-~~l~~~~~~--~-------~~~~~l~~~~~~~~~~~~ 266 (695)
T 2bkl_A 203 TIRYHTLGTEPSKDTVVHERTGD------PTTFLQSDLSRDG-KYLFVYILR--G-------WSENDVYWKRPGEKDFRL 266 (695)
T ss_dssp EEEEEETTSCGGGCEEEECCCCC------TTCEEEEEECTTS-CCEEEEEEE--T-------TTEEEEEEECTTCSSCEE
T ss_pred EEEEEECCCCchhceEEEecCCC------CEEEEEEEECCCC-CEEEEEEeC--C-------CCceEEEEEcCCCCceEE
Confidence 3888888877632 12111110 0013455566543 554444322 1 123345555555667776
Q ss_pred cCcccccccccCCCceeeeecceEEEEeecCCCCCccCceEEEEEECCccc---eeeecCCCccccCCCCeeEEEEeCCe
Q 045559 186 FQGFEFGMYDLDEVLDCTYHNGACHWLVPFGAFHPLCCHYVILSFDMSDEV---FEEILGPNCLLEISPKHTVFGLYNDS 262 (335)
Q Consensus 186 ~~~~p~~~~~~~~~~~~v~~~G~~ywl~~~~~~~~~~~~~~i~~fD~~~e~---~~~i~~P~~~~~~~~~~~~l~~~~g~ 262 (335)
+... .. .. ...+..+|.+|..+..+.. ...|+.+|+.+.. |..+-.+.... .-..+...+|.
T Consensus 267 l~~~-~~-~~----~~~~~~~g~l~~~s~~~~~-----~~~l~~~d~~~~~~~~~~~l~~~~~~~----~l~~~~~~~~~ 331 (695)
T 2bkl_A 267 LVKG-VG-AK----YEVHAWKDRFYVLTDEGAP-----RQRVFEVDPAKPARASWKEIVPEDSSA----SLLSVSIVGGH 331 (695)
T ss_dssp EEEC-SS-CC----EEEEEETTEEEEEECTTCT-----TCEEEEEBTTBCSGGGCEEEECCCSSC----EEEEEEEETTE
T ss_pred eecC-CC-ce----EEEEecCCcEEEEECCCCC-----CCEEEEEeCCCCCccCCeEEecCCCCC----eEEEEEEECCE
Confidence 6421 11 01 1244456776666553311 4589999987644 66552221110 11223445888
Q ss_pred EEEEEecCCCCEEEEEEECCCCceeEEEEeccCCc--eeeeEEEeeCCE-EEEEec----CCeEEEEeCCCCceeec
Q 045559 263 LSFLVFDERESCFDIWTMKERYHWTKEFSTTPILA--VDAPIGFWKNDT-FFIRSN----TEELLLYDPNSEEIIDF 332 (335)
Q Consensus 263 L~~~~~~~~~~~~~IW~l~~~~~W~~~~~i~~~~~--~~~~~~~~~~~~-il~~~~----~~~l~~yd~~~~~~~~v 332 (335)
|.+.... .....||+++-... ....+ ++.. ....+.+..+++ +++... ...++.||+++++.+.+
T Consensus 332 lv~~~~~--dg~~~l~~~~~~g~--~~~~l-~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~v~~~d~~~g~~~~l 403 (695)
T 2bkl_A 332 LSLEYLK--DATSEVRVATLKGK--PVRTV-QLPGVGAASNLMGLEDLDDAYYVFTSFTTPRQIYKTSVSTGKSELW 403 (695)
T ss_dssp EEEEEEE--TTEEEEEEEETTCC--EEEEC-CCSSSSEECCCBSCTTCSEEEEEEEETTEEEEEEEEETTTCCEEEE
T ss_pred EEEEEEE--CCEEEEEEEeCCCC--eeEEe-cCCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCCcEEEE
Confidence 7777665 46678888874122 33445 3332 222233334554 555433 24699999998876543
No 113
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=68.09 E-value=60 Score=28.18 Aligned_cols=197 Identities=8% Similarity=-0.047 Sum_probs=93.8
Q ss_pred eEEEeecCceEEEEecchhhhhcCCCCcccCCcCCceeeeeEEeecCCCCCeEEEEEEEEecCccccccCCCceEEEEEc
Q 045559 99 LFIMFIGGDEIALYNHATRDLKFLPKLTLIDNLESIYTIMFGLGLDPKCNYYKLVYIVTYHDSELGKVLNDSRQVFIYSF 178 (335)
Q Consensus 99 Ll~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~l~~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~~~vyss 178 (335)
+|+.......+.|||..+++...-...+.. ...+.......+.+.|....+ ++... ..-.+.+++.
T Consensus 96 ~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~-~~~~h~~~v~~~~~~p~~~~~-l~s~~------------~dg~i~iwd~ 161 (402)
T 2aq5_A 96 VIASGSEDCTVMVWEIPDGGLVLPLREPVI-TLEGHTKRVGIVAWHPTAQNV-LLSAG------------CDNVILVWDV 161 (402)
T ss_dssp EEEEEETTSEEEEEECCTTCCSSCBCSCSE-EEECCSSCEEEEEECSSBTTE-EEEEE------------TTSCEEEEET
T ss_pred EEEEEeCCCeEEEEEccCCCCccccCCceE-EecCCCCeEEEEEECcCCCCE-EEEEc------------CCCEEEEEEC
Confidence 444444577899999988754321100100 000001114566666654332 22221 1235788888
Q ss_pred CCCcceecCc-ccccccccCCCceeeee--cceEEEEeecCCCCCccCceEEEEEECCccceeee--cCCCccccCCCCe
Q 045559 179 SDNSWRNFQG-FEFGMYDLDEVLDCTYH--NGACHWLVPFGAFHPLCCHYVILSFDMSDEVFEEI--LGPNCLLEISPKH 253 (335)
Q Consensus 179 ~~~~W~~~~~-~p~~~~~~~~~~~~v~~--~G~~ywl~~~~~~~~~~~~~~i~~fD~~~e~~~~i--~~P~~~~~~~~~~ 253 (335)
+++.....-. .... .. -.++.+ +|.....+.. ...|..+|+.+.+.... ...... ..
T Consensus 162 ~~~~~~~~~~~~~~~-~~----v~~~~~~~~~~~l~~~~~--------d~~i~iwd~~~~~~~~~~~~~~~~~-----~~ 223 (402)
T 2aq5_A 162 GTGAAVLTLGPDVHP-DT----IYSVDWSRDGALICTSCR--------DKRVRVIEPRKGTVVAEKDRPHEGT-----RP 223 (402)
T ss_dssp TTTEEEEEECTTTCC-SC----EEEEEECTTSSCEEEEET--------TSEEEEEETTTTEEEEEEECSSCSS-----SC
T ss_pred CCCCccEEEecCCCC-Cc----eEEEEECCCCCEEEEEec--------CCcEEEEeCCCCceeeeeccCCCCC-----cc
Confidence 8765432110 0000 00 011222 4543333332 23688889877654322 222111 11
Q ss_pred eEEE-EeCCeEEEEEec-CCCCEEEEEEECCCCceeEEEEeccCCceeeeEEEeeCCEEEE-Ee-cCCeEEEEeCCCCc
Q 045559 254 TVFG-LYNDSLSFLVFD-ERESCFDIWTMKERYHWTKEFSTTPILAVDAPIGFWKNDTFFI-RS-NTEELLLYDPNSEE 328 (335)
Q Consensus 254 ~~l~-~~~g~L~~~~~~-~~~~~~~IW~l~~~~~W~~~~~i~~~~~~~~~~~~~~~~~il~-~~-~~~~l~~yd~~~~~ 328 (335)
..+. .-+|++.+++.. .....+.||-++....=.....+ ....-..-+.+.++++.++ .. .++.+.+||.++++
T Consensus 224 ~~~~~~~~~~~l~~g~~~~~d~~i~iwd~~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~l~~~g~~dg~i~i~d~~~~~ 301 (402)
T 2aq5_A 224 VHAVFVSEGKILTTGFSRMSERQVALWDTKHLEEPLSLQEL-DTSSGVLLPFFDPDTNIVYLCGKGDSSIRYFEITSEA 301 (402)
T ss_dssp CEEEECSTTEEEEEEECTTCCEEEEEEETTBCSSCSEEEEC-CCCSSCEEEEEETTTTEEEEEETTCSCEEEEEECSST
T ss_pred eEEEEcCCCcEEEEeccCCCCceEEEEcCccccCCceEEec-cCCCceeEEEEcCCCCEEEEEEcCCCeEEEEEecCCC
Confidence 1222 236665555532 13678999998872211223334 2332233445566777554 44 46789999998876
No 114
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=67.51 E-value=55 Score=27.47 Aligned_cols=208 Identities=8% Similarity=-0.011 Sum_probs=101.0
Q ss_pred cccceEEEee-cCceEEEEecchhhhhcCCCCcccCCcCCceeeeeEEeecCCCCCeEEEEEEEEecCccccccCCCceE
Q 045559 95 PFEGLFIMFI-GGDEIALYNHATRDLKFLPKLTLIDNLESIYTIMFGLGLDPKCNYYKLVYIVTYHDSELGKVLNDSRQV 173 (335)
Q Consensus 95 s~~GLl~~~~-~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~l~~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~~ 173 (335)
+.+|-|.+.. ....++++||.|++...+...... ...++.+++.. . ++.... .. ......+
T Consensus 53 ~~~g~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~--------~~~~i~~~~dg-~--l~v~~~--~~-----~~~~~~i 114 (333)
T 2dg1_A 53 DRQGQLFLLDVFEGNIFKINPETKEIKRPFVSHKA--------NPAAIKIHKDG-R--LFVCYL--GD-----FKSTGGI 114 (333)
T ss_dssp CTTSCEEEEETTTCEEEEECTTTCCEEEEEECSSS--------SEEEEEECTTS-C--EEEEEC--TT-----SSSCCEE
T ss_pred CCCCCEEEEECCCCEEEEEeCCCCcEEEEeeCCCC--------CcceEEECCCC-c--EEEEeC--CC-----CCCCceE
Confidence 3466665543 366899999999887765321111 13566777653 2 222211 10 0112367
Q ss_pred EEEEcCCCcceec-CcccccccccCCCceeeeecceEEEEeecCCCCCccCceEEEEEECCccceeeecCCCccccCCCC
Q 045559 174 FIYSFSDNSWRNF-QGFEFGMYDLDEVLDCTYHNGACHWLVPFGAFHPLCCHYVILSFDMSDEVFEEILGPNCLLEISPK 252 (335)
Q Consensus 174 ~vyss~~~~W~~~-~~~p~~~~~~~~~~~~v~~~G~~ywl~~~~~~~~~~~~~~i~~fD~~~e~~~~i~~P~~~~~~~~~ 252 (335)
.+|+..++.-+.. ....... ... .-.+.-+|.+|.....+.. ......|..+|.++.+...+... .. .
T Consensus 115 ~~~d~~~~~~~~~~~~~~~~~-~~~--~i~~d~~g~l~v~~~~~~~--~~~~~~l~~~~~~~~~~~~~~~~--~~----~ 183 (333)
T 2dg1_A 115 FAATENGDNLQDIIEDLSTAY-CID--DMVFDSKGGFYFTDFRGYS--TNPLGGVYYVSPDFRTVTPIIQN--IS----V 183 (333)
T ss_dssp EEECTTSCSCEEEECSSSSCC-CEE--EEEECTTSCEEEEECCCBT--TBCCEEEEEECTTSCCEEEEEEE--ES----S
T ss_pred EEEeCCCCEEEEEEccCccCC-ccc--ceEECCCCCEEEEeccccc--cCCCceEEEEeCCCCEEEEeecC--CC----c
Confidence 7777776654422 1111000 000 0122235766654432100 00035789999887666544210 00 1
Q ss_pred eeEEEE-eCCe-EEEEEecCCCCEEEEEEECC-CCceeEE-EEe-ccCCc--eeeeEEEeeCCEEEEEec-CCeEEEEeC
Q 045559 253 HTVFGL-YNDS-LSFLVFDERESCFDIWTMKE-RYHWTKE-FST-TPILA--VDAPIGFWKNDTFFIRSN-TEELLLYDP 324 (335)
Q Consensus 253 ~~~l~~-~~g~-L~~~~~~~~~~~~~IW~l~~-~~~W~~~-~~i-~~~~~--~~~~~~~~~~~~il~~~~-~~~l~~yd~ 324 (335)
...++. -+|+ |++.... ...+.+|-++. ....... ..+ ..... ...-+++..+|++++... .+.|..||+
T Consensus 184 ~~~i~~~~dg~~l~v~~~~--~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~v~~~d~ 261 (333)
T 2dg1_A 184 ANGIALSTDEKVLWVTETT--ANRLHRIALEDDGVTIQPFGATIPYYFTGHEGPDSCCIDSDDNLYVAMYGQGRVLVFNK 261 (333)
T ss_dssp EEEEEECTTSSEEEEEEGG--GTEEEEEEECTTSSSEEEEEEEEEEECCSSSEEEEEEEBTTCCEEEEEETTTEEEEECT
T ss_pred ccceEECCCCCEEEEEeCC--CCeEEEEEecCCCcCcccccceEEEecCCCCCCCceEECCCCCEEEEEcCCCEEEEECC
Confidence 122333 3555 6666543 45777787753 1222211 111 01111 233345556788877653 568999999
Q ss_pred CCCceeecc
Q 045559 325 NSEEIIDFQ 333 (335)
Q Consensus 325 ~~~~~~~v~ 333 (335)
+++.++.+.
T Consensus 262 ~g~~~~~~~ 270 (333)
T 2dg1_A 262 RGYPIGQIL 270 (333)
T ss_dssp TSCEEEEEE
T ss_pred CCCEEEEEE
Confidence 877666553
No 115
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=67.36 E-value=51 Score=27.10 Aligned_cols=67 Identities=10% Similarity=0.139 Sum_probs=39.9
Q ss_pred cccceEEEeecCceEEEEecchhhhhcCCCCcccCCcCCceeeeeEEeecCCCCCeEEEEEEEEecCccccccCCCceEE
Q 045559 95 PFEGLFIMFIGGDEIALYNHATRDLKFLPKLTLIDNLESIYTIMFGLGLDPKCNYYKLVYIVTYHDSELGKVLNDSRQVF 174 (335)
Q Consensus 95 s~~GLl~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~l~~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~~~ 174 (335)
|.+|+|.... ...+.|||..|++...+-..... ......+.+.+.. .+-+..- ..-.+.
T Consensus 34 S~~~~lAvg~-D~tV~iWd~~tg~~~~~~~~~~~------~~~V~~v~~~~~~-~~l~sgs-------------~Dg~v~ 92 (318)
T 4ggc_A 34 SSGNVLAVAL-DNSVYLWSASSGDILQLLQMEQP------GEYISSVAWIKEG-NYLAVGT-------------SSAEVQ 92 (318)
T ss_dssp CTTSEEEEEE-TTEEEEEETTTCCEEEEEECCST------TCCEEEEEECTTS-SEEEEEE-------------TTSEEE
T ss_pred CCCCEEEEEe-CCEEEEEECCCCCEEEEEEecCC------CCeEEEEEECCCC-CEEEEEE-------------CCCcEE
Confidence 6788877666 77899999999987654332211 0113456666643 3433221 123577
Q ss_pred EEEcCCCc
Q 045559 175 IYSFSDNS 182 (335)
Q Consensus 175 vyss~~~~ 182 (335)
+++.+++.
T Consensus 93 iw~~~~~~ 100 (318)
T 4ggc_A 93 LWDVQQQK 100 (318)
T ss_dssp EEETTTTE
T ss_pred EeecCCce
Confidence 88877664
No 116
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=67.26 E-value=53 Score=27.21 Aligned_cols=184 Identities=11% Similarity=0.144 Sum_probs=89.7
Q ss_pred eEEEeecCceEEEEecchhhhhcCCCCcccCCcCCceeeeeEEeecCCCCCeEEEEEEEEecCccccccCCCceEEEEEc
Q 045559 99 LFIMFIGGDEIALYNHATRDLKFLPKLTLIDNLESIYTIMFGLGLDPKCNYYKLVYIVTYHDSELGKVLNDSRQVFIYSF 178 (335)
Q Consensus 99 Ll~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~l~~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~~~vyss 178 (335)
+++.......+.+||..+++.......... ......+.+.+.. .+-+ ... ..-.+.+|+.
T Consensus 111 ~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~------~~~i~~~~~~~~~-~~l~-~~~------------~dg~v~~~d~ 170 (337)
T 1gxr_A 111 TLIVGGEASTLSIWDLAAPTPRIKAELTSS------APACYALAISPDS-KVCF-SCC------------SDGNIAVWDL 170 (337)
T ss_dssp EEEEEESSSEEEEEECCCC--EEEEEEECS------SSCEEEEEECTTS-SEEE-EEE------------TTSCEEEEET
T ss_pred EEEEEcCCCcEEEEECCCCCcceeeecccC------CCceEEEEECCCC-CEEE-EEe------------CCCcEEEEeC
Confidence 344444467889999888763322211111 0113456666632 3322 221 1235788888
Q ss_pred CCCcceec-CcccccccccCCCceeeee--cceEEEEeecCCCCCccCceEEEEEECCccceeee-cCCCccccCCCCee
Q 045559 179 SDNSWRNF-QGFEFGMYDLDEVLDCTYH--NGACHWLVPFGAFHPLCCHYVILSFDMSDEVFEEI-LGPNCLLEISPKHT 254 (335)
Q Consensus 179 ~~~~W~~~-~~~p~~~~~~~~~~~~v~~--~G~~ywl~~~~~~~~~~~~~~i~~fD~~~e~~~~i-~~P~~~~~~~~~~~ 254 (335)
+++.-... ....... ..+.+ +|.....+.. ...|..+|+.+.+.... ..+.. -.
T Consensus 171 ~~~~~~~~~~~~~~~i-------~~~~~~~~~~~l~~~~~--------dg~i~~~d~~~~~~~~~~~~~~~-------v~ 228 (337)
T 1gxr_A 171 HNQTLVRQFQGHTDGA-------SCIDISNDGTKLWTGGL--------DNTVRSWDLREGRQLQQHDFTSQ-------IF 228 (337)
T ss_dssp TTTEEEEEECCCSSCE-------EEEEECTTSSEEEEEET--------TSEEEEEETTTTEEEEEEECSSC-------EE
T ss_pred CCCceeeeeecccCce-------EEEEECCCCCEEEEEec--------CCcEEEEECCCCceEeeecCCCc-------eE
Confidence 77643211 1100000 11111 4544333332 33688889876644322 32221 12
Q ss_pred EEEE-eCCeEEEEEecCCCCEEEEEEECCCCceeEEEEeccCCceeeeEEEeeCCEEEE-EecCCeEEEEeCCCCcee
Q 045559 255 VFGL-YNDSLSFLVFDERESCFDIWTMKERYHWTKEFSTTPILAVDAPIGFWKNDTFFI-RSNTEELLLYDPNSEEII 330 (335)
Q Consensus 255 ~l~~-~~g~L~~~~~~~~~~~~~IW~l~~~~~W~~~~~i~~~~~~~~~~~~~~~~~il~-~~~~~~l~~yd~~~~~~~ 330 (335)
.+.. -+|...++... ...+.+|-++... ...+........-+.+.+++++++ ...++.+..||+++++..
T Consensus 229 ~~~~s~~~~~l~~~~~--~~~i~~~~~~~~~----~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~ 300 (337)
T 1gxr_A 229 SLGYCPTGEWLAVGME--SSNVEVLHVNKPD----KYQLHLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGASI 300 (337)
T ss_dssp EEEECTTSSEEEEEET--TSCEEEEETTSSC----EEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEE
T ss_pred EEEECCCCCEEEEEcC--CCcEEEEECCCCC----eEEEcCCccceeEEEECCCCCEEEEecCCCcEEEEECCCCeEE
Confidence 2333 25554444444 4678999888722 122312333344455566777544 455778999998887654
No 117
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=66.87 E-value=85 Score=29.46 Aligned_cols=196 Identities=8% Similarity=-0.030 Sum_probs=95.6
Q ss_pred ceEEEEecch------hhhhcCC-CCcccCCcCCceeeeeEEeecCCCCCeEEEEEEEEecCccccccCCCceEEEEEcC
Q 045559 107 DEIALYNHAT------RDLKFLP-KLTLIDNLESIYTIMFGLGLDPKCNYYKLVYIVTYHDSELGKVLNDSRQVFIYSFS 179 (335)
Q Consensus 107 ~~~~V~NP~T------~~~~~LP-~~~~~~~~~~~~~~~~~l~~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~~~vyss~ 179 (335)
..++++|..+ ++.+.|. ..... .....+.|.. ++-++ ...+ ... . .-....+.+++..
T Consensus 161 ~~i~~~~~~~~~~~~~~~~~~l~~~~~~~---------~~~~~~SpDG-~~la~-~~~~-~~~-~--~~~~~~i~~~d~~ 225 (662)
T 3azo_A 161 RFLAAVPLDGSAAADRSAVRELSDDAHRF---------VTGPRLSPDG-RQAVW-LAWD-HPR-M--PWEGTELKTARVT 225 (662)
T ss_dssp EEEEEEETTSTTTTCGGGSEESSCSCSSE---------ECCCEECTTS-SEEEE-EEEC-TTC-C--TTTCEEEEEEEEC
T ss_pred eEEEEEECCCCccccCCceeEEEecCCCc---------ccCceECCCC-CEEEE-EECC-CCC-C--CCCCcEEEEEEEC
Confidence 4789999998 7776665 32211 2334455532 33222 2211 100 0 0123578888888
Q ss_pred -CCcceecCccccc-ccccCCCceeee-ecceEEEEeecCCCCCccCceEEEEEECCccceeee-cCCCccccC--CCCe
Q 045559 180 -DNSWRNFQGFEFG-MYDLDEVLDCTY-HNGACHWLVPFGAFHPLCCHYVILSFDMSDEVFEEI-LGPNCLLEI--SPKH 253 (335)
Q Consensus 180 -~~~W~~~~~~p~~-~~~~~~~~~~v~-~~G~~ywl~~~~~~~~~~~~~~i~~fD~~~e~~~~i-~~P~~~~~~--~~~~ 253 (335)
++.+.....+... .... ....+ -||.+|+.+..+. ...|..+|+.+.++..+ ......... ....
T Consensus 226 ~~g~~~~~~~l~~~~~~~~---~~~~~spdg~l~~~~~~~~------~~~l~~~~~~~~~~~~l~~~~~~~~~p~w~~~~ 296 (662)
T 3azo_A 226 EDGRFADTRTLLGGPEEAI---AQAEWAPDGSLIVATDRTG------WWNLHRVDPATGAATQLCRREEEFAGPLWTPGM 296 (662)
T ss_dssp TTSCEEEEEEEEEETTBCE---EEEEECTTSCEEEEECTTS------SCEEEEECTTTCCEEESSCCSSBSSCCCCSTTC
T ss_pred CCCcccccEEeCCCCCceE---cceEECCCCeEEEEECCCC------CeEEEEEECCCCceeecccccccccCccccccC
Confidence 5633322111100 0000 01222 3788887765432 34789999877776655 332222110 0001
Q ss_pred eEEEEe-CCeEEEEEecCCCCEEEEEEECC-CCceeEEEEeccCCceeeeEEEeeCCEEEEEec-C---CeEEEEeCCCC
Q 045559 254 TVFGLY-NDSLSFLVFDERESCFDIWTMKE-RYHWTKEFSTTPILAVDAPIGFWKNDTFFIRSN-T---EELLLYDPNSE 327 (335)
Q Consensus 254 ~~l~~~-~g~L~~~~~~~~~~~~~IW~l~~-~~~W~~~~~i~~~~~~~~~~~~~~~~~il~~~~-~---~~l~~yd~~~~ 327 (335)
..+... +|++.+.... ....||.++. ... ..++.........+.....+.+++... . ..++.+|++++
T Consensus 297 ~~~~~~~~~~~~~~~~~---~~~~l~~~d~~~~~---~~~l~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~i~~~d~~~g 370 (662)
T 3azo_A 297 RWFAPLANGLIAVVHGK---GAAVLGILDPESGE---LVDAAGPWTEWAATLTVSGTRAVGVAASPRTAYEVVELDTVTG 370 (662)
T ss_dssp CSEEECTTSCEEEEEBS---SSCEEEEEETTTTE---EEECCSSCCEEEEEEEEETTEEEEEEEETTEEEEEEEEETTTC
T ss_pred ceEeEeCCCEEEEEEEc---CccEEEEEECCCCc---EEEecCCCCeEEEEEecCCCEEEEEEcCCCCCCEEEEEECCCC
Confidence 224444 5666555443 5678998875 333 233411122233331122445655443 2 36899999888
Q ss_pred ceeec
Q 045559 328 EIIDF 332 (335)
Q Consensus 328 ~~~~v 332 (335)
+.+.+
T Consensus 371 ~~~~l 375 (662)
T 3azo_A 371 RARTI 375 (662)
T ss_dssp CEEEE
T ss_pred ceEEe
Confidence 87655
No 118
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=66.81 E-value=69 Score=28.41 Aligned_cols=200 Identities=8% Similarity=-0.035 Sum_probs=97.1
Q ss_pred cccceEEEee-cCceEEEEecchhhhhcCCCCcccCCcCCceeeeeEEeecCCCCCeEEEEEEEEecCccccccCCCceE
Q 045559 95 PFEGLFIMFI-GGDEIALYNHATRDLKFLPKLTLIDNLESIYTIMFGLGLDPKCNYYKLVYIVTYHDSELGKVLNDSRQV 173 (335)
Q Consensus 95 s~~GLl~~~~-~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~l~~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~~ 173 (335)
+.+|-|.+.. ....+.++||.+++...+...... .. +.+++..+ .++.. . . .....+
T Consensus 139 d~~g~lyv~d~~~~~I~~id~~~g~~~~~~~~~~~---------~~-ia~~~~g~--~l~~~-d---~------~~~~~I 196 (409)
T 3hrp_A 139 VGNNTVLAYQRDDPRVRLISVDDNKVTTVHPGFKG---------GK-PAVTKDKQ--RVYSI-G---W------EGTHTV 196 (409)
T ss_dssp CSTTEEEEEETTTTEEEEEETTTTEEEEEEETCCB---------CB-CEECTTSS--EEEEE-B---S------STTCEE
T ss_pred eCCCCEEEEecCCCcEEEEECCCCEEEEeeccCCC---------Cc-eeEecCCC--cEEEE-e---c------CCCceE
Confidence 3566655555 357889999998887665433211 12 55666443 22222 1 0 111256
Q ss_pred EEEEcCCCc-ceecCcccccccccCCCceeeee-cceEEEEeecCCCCCccCceEEEEEECCccceeeecCCCccccCCC
Q 045559 174 FIYSFSDNS-WRNFQGFEFGMYDLDEVLDCTYH-NGACHWLVPFGAFHPLCCHYVILSFDMSDEVFEEILGPNCLLEISP 251 (335)
Q Consensus 174 ~vyss~~~~-W~~~~~~p~~~~~~~~~~~~v~~-~G~~ywl~~~~~~~~~~~~~~i~~fD~~~e~~~~i~~P~~~~~~~~ 251 (335)
.+++..++. .+.....+......+ ..-.+.- +|.+|+ +.. ...|..+|+.+.....+...........
T Consensus 197 ~~~d~~~~~~~~~~g~~~~~~~~~p-~~iav~p~~g~lyv-~d~--------~~~I~~~d~~~~~~~~~~~~~~~g~~~~ 266 (409)
T 3hrp_A 197 YVYMKASGWAPTRIGQLGSTFSGKI-GAVALDETEEWLYF-VDS--------NKNFGRFNVKTQEVTLIKQLELSGSLGT 266 (409)
T ss_dssp EEEEGGGTTCEEEEEECCTTSCSCC-CBCEECTTSSEEEE-ECT--------TCEEEEEETTTCCEEEEEECCCCSCCCC
T ss_pred EEEEcCCCceeEEeeeccchhcCCc-EEEEEeCCCCeEEE-EEC--------CCcEEEEECCCCCEEEEecccccCCCCC
Confidence 666665432 222211111001111 0012222 688999 332 3479999998776555511111111000
Q ss_pred Cee-EEEEe--CCeEEEEEecCCCCEEEEEEECCCCceeEEEEeccC------------CceeeeEE--EeeCCEEEEEe
Q 045559 252 KHT-VFGLY--NDSLSFLVFDERESCFDIWTMKERYHWTKEFSTTPI------------LAVDAPIG--FWKNDTFFIRS 314 (335)
Q Consensus 252 ~~~-~l~~~--~g~L~~~~~~~~~~~~~IW~l~~~~~W~~~~~i~~~------------~~~~~~~~--~~~~~~il~~~ 314 (335)
... .++.. +|.|++.... .+. |++++....-.. ..+.. ..+..|.+ +.++|++++..
T Consensus 267 ~P~~~ia~~p~~g~lyv~d~~--~~~--I~~~~~~g~~~~--~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad 340 (409)
T 3hrp_A 267 NPGPYLIYYFVDSNFYMSDQN--LSS--VYKITPDGECEW--FCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVD 340 (409)
T ss_dssp SSCCEEEEETTTTEEEEEETT--TTE--EEEECTTCCEEE--EEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEE
T ss_pred CccccEEEeCCCCEEEEEeCC--CCE--EEEEecCCCEEE--EEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEe
Confidence 101 45544 5778887654 444 455554222111 11111 11334554 44578887765
Q ss_pred --cCCeEEEEeCCCCceeec
Q 045559 315 --NTEELLLYDPNSEEIIDF 332 (335)
Q Consensus 315 --~~~~l~~yd~~~~~~~~v 332 (335)
...++..+|+.++++..+
T Consensus 341 ~~~~~~I~~~~~~~G~v~~~ 360 (409)
T 3hrp_A 341 GFKGYCLRKLDILDGYVSTV 360 (409)
T ss_dssp TTTTCEEEEEETTTTEEEEE
T ss_pred CCCCCEEEEEECCCCEEEEE
Confidence 456899999777776543
No 119
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=66.23 E-value=99 Score=29.99 Aligned_cols=197 Identities=10% Similarity=0.035 Sum_probs=97.1
Q ss_pred ccceEEEeecCceEEEEecchhhhhcCCCCcccCCcCCceeeeeEEeecCCCCCeEEEEEEEEecCccccccCCCceEEE
Q 045559 96 FEGLFIMFIGGDEIALYNHATRDLKFLPKLTLIDNLESIYTIMFGLGLDPKCNYYKLVYIVTYHDSELGKVLNDSRQVFI 175 (335)
Q Consensus 96 ~~GLl~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~l~~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~~~v 175 (335)
.+|-|-+......++++||.|+++..+...... . ......+..|... . +.+.. ..-.+..
T Consensus 372 ~~g~lWigt~~~Gl~~~~~~~~~~~~~~~~~~~--~---~~~v~~i~~d~~g-~---lWigt-----------~~~Gl~~ 431 (781)
T 3v9f_A 372 GQGKLWIGTDGGGINVFENGKRVAIYNKENREL--L---SNSVLCSLKDSEG-N---LWFGT-----------YLGNISY 431 (781)
T ss_dssp TTSCEEEEEBSSCEEEEETTEEEEECC-----C--C---CSBEEEEEECTTS-C---EEEEE-----------TTEEEEE
T ss_pred CCCCEEEEeCCCcEEEEECCCCeEEEccCCCCC--C---CcceEEEEECCCC-C---EEEEe-----------ccCCEEE
Confidence 356666665456788899998877665321111 0 0113444445322 1 22221 1235677
Q ss_pred EEcCCCcceecCcccccccccCCCceeeee--cceEEEEeecCCCCCccCceEEEEEECCccceeeecCCCccccCCCCe
Q 045559 176 YSFSDNSWRNFQGFEFGMYDLDEVLDCTYH--NGACHWLVPFGAFHPLCCHYVILSFDMSDEVFEEILGPNCLLEISPKH 253 (335)
Q Consensus 176 yss~~~~W~~~~~~p~~~~~~~~~~~~v~~--~G~~ywl~~~~~~~~~~~~~~i~~fD~~~e~~~~i~~P~~~~~~~~~~ 253 (335)
|+.+++.++.......+... -.+++. +|. .|++... .|..||..+.+|..+............-
T Consensus 432 ~~~~~~~~~~~~~~~~~~~~----v~~i~~d~~g~-lwigt~~---------Gl~~~~~~~~~~~~~~~~~~~~~~~~~i 497 (781)
T 3v9f_A 432 YNTRLKKFQIIELEKNELLD----VRVFYEDKNKK-IWIGTHA---------GVFVIDLASKKVIHHYDTSNSQLLENFV 497 (781)
T ss_dssp ECSSSCEEEECCSTTTCCCC----EEEEEECTTSE-EEEEETT---------EEEEEESSSSSCCEEECTTTSSCSCSCE
T ss_pred EcCCCCcEEEeccCCCCCCe----EEEEEECCCCC-EEEEECC---------ceEEEeCCCCeEEecccCccccccccee
Confidence 77777777665421111000 013333 355 5665532 6999999998887763222111100112
Q ss_pred eEEEE-eCCeEEEEEecCCCCEEEEEEECC-CCceeEEEEeccCC-ceeeeEEEeeCCEEEEEecCCeE-EEEeCCCCce
Q 045559 254 TVFGL-YNDSLSFLVFDERESCFDIWTMKE-RYHWTKEFSTTPIL-AVDAPIGFWKNDTFFIRSNTEEL-LLYDPNSEEI 329 (335)
Q Consensus 254 ~~l~~-~~g~L~~~~~~~~~~~~~IW~l~~-~~~W~~~~~i~~~~-~~~~~~~~~~~~~il~~~~~~~l-~~yd~~~~~~ 329 (335)
..+.+ .+|.|.+.+... . ++.++. ...+.....-..++ ....-+....+|.+.+... ..+ ..||++++++
T Consensus 498 ~~i~~d~~g~lWigt~~~---G--l~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWi~T~-~Glv~~~d~~~~~~ 571 (781)
T 3v9f_A 498 RSIAQDSEGRFWIGTFGG---G--VGIYTPDMQLVRKFNQYEGFCSNTINQIYRSSKGQMWLATG-EGLVCFPSARNFDY 571 (781)
T ss_dssp EEEEECTTCCEEEEESSS---C--EEEECTTCCEEEEECTTTTCSCSCEEEEEECTTSCEEEEET-TEEEEESCTTTCCC
T ss_pred EEEEEcCCCCEEEEEcCC---C--EEEEeCCCCeEEEccCCCCCCCCeeEEEEECCCCCEEEEEC-CCceEEECCCCCcE
Confidence 23333 366677766531 1 445554 34443211100111 1122233334677888877 457 9999999887
Q ss_pred eec
Q 045559 330 IDF 332 (335)
Q Consensus 330 ~~v 332 (335)
+.+
T Consensus 572 ~~~ 574 (781)
T 3v9f_A 572 QVF 574 (781)
T ss_dssp EEE
T ss_pred EEc
Confidence 654
No 120
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=66.15 E-value=76 Score=28.61 Aligned_cols=69 Identities=13% Similarity=0.111 Sum_probs=47.6
Q ss_pred CCeEEEEEecCC-----CCEEEEEEECCCCceeEEEEeccCCceeeeEEEeeCCE-EEEEec--CCeEEEEeCCCCcee
Q 045559 260 NDSLSFLVFDER-----ESCFDIWTMKERYHWTKEFSTTPILAVDAPIGFWKNDT-FFIRSN--TEELLLYDPNSEEII 330 (335)
Q Consensus 260 ~g~L~~~~~~~~-----~~~~~IW~l~~~~~W~~~~~i~~~~~~~~~~~~~~~~~-il~~~~--~~~l~~yd~~~~~~~ 330 (335)
+++|++...... ...=+||+.|- ..+..+.+| +......-+.+..||+ .++..+ ++.|.++|+++.+..
T Consensus 330 g~rlyVa~~~~~~gthk~~s~~VsVID~-~T~kvv~~I-~vg~~P~gia~spDg~~~lyv~n~~s~~VsVID~~t~kvv 406 (426)
T 3c75_H 330 SDRIYLLVDQRDEWKHKAASRFVVVLNA-ETGERINKI-ELGHEIDSINVSQDAEPLLYALSAGTQTLHIYDAATGEEL 406 (426)
T ss_dssp GTEEEEEEEECCTTCTTSCEEEEEEEET-TTCCEEEEE-EEEEEECEEEECCSSSCEEEEEETTTTEEEEEETTTCCEE
T ss_pred CCEEEEEecccccccccCCCCEEEEEEC-CCCeEEEEE-ECCCCcCeEEEccCCCEEEEEEcCCCCeEEEEECCCCCEE
Confidence 456888765321 12457899986 777888888 6665455556677887 655443 688999999998864
No 121
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=65.41 E-value=54 Score=31.54 Aligned_cols=113 Identities=12% Similarity=0.120 Sum_probs=59.2
Q ss_pred eeeeecceEEEEeecCCCCCccCceEEEEEECCcc--ceeee-cCCCccc---cCCCCeeEEEEeCCeEEEEEecCCCCE
Q 045559 201 DCTYHNGACHWLVPFGAFHPLCCHYVILSFDMSDE--VFEEI-LGPNCLL---EISPKHTVFGLYNDSLSFLVFDERESC 274 (335)
Q Consensus 201 ~~v~~~G~~ywl~~~~~~~~~~~~~~i~~fD~~~e--~~~~i-~~P~~~~---~~~~~~~~l~~~~g~L~~~~~~~~~~~ 274 (335)
.+++.+|.+|..+.. ..|.++|.++. .|+.- ..+.... ..+.....++..+|+|++...+ ..
T Consensus 72 ~P~v~~g~vyv~~~~---------~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~a~~~~~v~v~~~d---g~ 139 (677)
T 1kb0_A 72 TPVVVDGIMYVSASW---------SVVHAIDTRTGNRIWTYDPQIDRSTGFKGCCDVVNRGVALWKGKVYVGAWD---GR 139 (677)
T ss_dssp CCEEETTEEEEECGG---------GCEEEEETTTTEEEEEECCCCCGGGGGGSSSCSCCCCCEEETTEEEEECTT---SE
T ss_pred CCEEECCEEEEECCC---------CeEEEEECCCCcEEEEEcCCCCccccccccccCCCCCceEECCEEEEEcCC---CE
Confidence 378899999987763 36999997654 55432 2221110 0000122344566776665432 33
Q ss_pred EEEEEECC---CCceeEEEEecc---CCceeeeEEEeeCCEEEEEec------CCeEEEEeCCCCce
Q 045559 275 FDIWTMKE---RYHWTKEFSTTP---ILAVDAPIGFWKNDTFFIRSN------TEELLLYDPNSEEI 329 (335)
Q Consensus 275 ~~IW~l~~---~~~W~~~~~i~~---~~~~~~~~~~~~~~~il~~~~------~~~l~~yd~~~~~~ 329 (335)
|..++. ...|......+. ......|+.. ++.+++... +..|..||.+|++.
T Consensus 140 --l~alD~~tG~~~W~~~~~~~~~~~~~~~~~p~v~--~~~v~v~~~~~~~~~~g~v~a~D~~tG~~ 202 (677)
T 1kb0_A 140 --LIALDAATGKEVWHQNTFEGQKGSLTITGAPRVF--KGKVIIGNGGAEYGVRGYITAYDAETGER 202 (677)
T ss_dssp --EEEEETTTCCEEEEEETTTTCCSSCBCCSCCEEE--TTEEEECCBCTTTCCBCEEEEEETTTCCE
T ss_pred --EEEEECCCCCEEeeecCCcCcCcCcccccCcEEE--CCEEEEEecccccCCCCEEEEEECCCCcE
Confidence 334443 456765321000 1111344432 566666543 46799999998774
No 122
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=65.36 E-value=56 Score=30.65 Aligned_cols=112 Identities=8% Similarity=0.076 Sum_probs=60.0
Q ss_pred eeeeecceEEEEee-cCCCCCccCceEEEEEEC-Ccc--ceeeecCCCcccc-----CCCCeeEEEEeCCeEEEEEecCC
Q 045559 201 DCTYHNGACHWLVP-FGAFHPLCCHYVILSFDM-SDE--VFEEILGPNCLLE-----ISPKHTVFGLYNDSLSFLVFDER 271 (335)
Q Consensus 201 ~~v~~~G~~ywl~~-~~~~~~~~~~~~i~~fD~-~~e--~~~~i~~P~~~~~-----~~~~~~~l~~~~g~L~~~~~~~~ 271 (335)
.++..+|.+|.... .+ .+.++|. ++. .|+. .++..... .+.....++..+|++++...+
T Consensus 57 ~P~v~~g~vyv~~~~~~---------~v~AlD~~~tG~~~W~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~d-- 124 (571)
T 2ad6_A 57 APLVIGDMMYVHSAFPN---------NTYALNLNDPGKIVWQH-KPKQDASTKAVMCCDVVDRGLAYGAGQIVKKQAN-- 124 (571)
T ss_dssp CCEEETTEEEEECSTTT---------CEEEEETTCTTSEEEEE-CCCCCGGGGGGCTTCSCCCCCEEETTEEEEECTT--
T ss_pred ccEEECCEEEEEeCCCC---------EEEEEeCCCCccEEEEE-cCCCCccccccccccccccccEEECCEEEEEeCC--
Confidence 37889999998775 32 5999998 544 4543 22221100 000112345567777665432
Q ss_pred CCEEEEEEECC---CCceeEEEEeccC--CceeeeEEEeeCCEEEEEec------CCeEEEEeCCCCce
Q 045559 272 ESCFDIWTMKE---RYHWTKEFSTTPI--LAVDAPIGFWKNDTFFIRSN------TEELLLYDPNSEEI 329 (335)
Q Consensus 272 ~~~~~IW~l~~---~~~W~~~~~i~~~--~~~~~~~~~~~~~~il~~~~------~~~l~~yd~~~~~~ 329 (335)
.. +..++. ...|.....-.+. .....|+.. ++.+++... +..|+.||++|++.
T Consensus 125 -g~--l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v~--~g~v~vg~~~~~~~~~g~v~a~D~~tG~~ 188 (571)
T 2ad6_A 125 -GH--LLALDAKTGKINWEVEVCDPKVGSTLTQAPFVA--KDTVLMGCSGAELGVRGAVNAFDLKTGEL 188 (571)
T ss_dssp -SE--EEEEETTTCCEEEEEECCCGGGTCBCCSCCEEE--TTEEEEECBCGGGTCCCEEEEEETTTCCE
T ss_pred -CE--EEEEECCCCCEEEEecCCCCCccceeccCCEEE--CCEEEEEecCCccCCCCEEEEEECCCCcE
Confidence 22 445553 4567653211000 112344432 667766554 46899999998764
No 123
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=64.69 E-value=64 Score=27.55 Aligned_cols=107 Identities=9% Similarity=0.063 Sum_probs=53.3
Q ss_pred cceEEEEeecCCCCCccCceEEEEEECCccceeeecCCCccccCCCCeeEEEEeCCeEEEEEecCCCCEEEEEEECCCCc
Q 045559 206 NGACHWLVPFGAFHPLCCHYVILSFDMSDEVFEEILGPNCLLEISPKHTVFGLYNDSLSFLVFDERESCFDIWTMKERYH 285 (335)
Q Consensus 206 ~G~~ywl~~~~~~~~~~~~~~i~~fD~~~e~~~~i~~P~~~~~~~~~~~~l~~~~g~L~~~~~~~~~~~~~IW~l~~~~~ 285 (335)
+|.+||.... ...|.++|+....-........... .....+...+|.|++.... ...+.+..++. .
T Consensus 46 ~~~lyw~D~~--------~~~I~r~~~~g~~~~~~~~~~~l~~--p~glavd~~~g~ly~~d~~--~~~I~~~~~dG--~ 111 (318)
T 3sov_A 46 HGLIYWSDVS--------EEAIKRTEFNKTESVQNVVVSGLLS--PDGLACDWLGEKLYWTDSE--TNRIEVSNLDG--S 111 (318)
T ss_dssp GTEEEEEETT--------TTEEEEEETTSSSCCCEEEEECCSC--CCEEEEETTTTEEEEEETT--TTEEEEEETTS--C
T ss_pred CCEEEEEECC--------CCcEEEEEccCCCceEEEEcCCCCC--ccEEEEEcCCCeEEEEECC--CCEEEEEECCC--C
Confidence 5899998754 3479999987653211111111110 0122222247778887765 45665555554 2
Q ss_pred eeEEEEeccCCceeeeEEE--ee-CCEEEEEec--CCeEEEEeCCCCce
Q 045559 286 WTKEFSTTPILAVDAPIGF--WK-NDTFFIRSN--TEELLLYDPNSEEI 329 (335)
Q Consensus 286 W~~~~~i~~~~~~~~~~~~--~~-~~~il~~~~--~~~l~~yd~~~~~~ 329 (335)
-.+.. + -..+..|.++ .. +|.++.... ..++..+|++....
T Consensus 112 ~~~~l-~--~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~ 157 (318)
T 3sov_A 112 LRKVL-F--WQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSR 157 (318)
T ss_dssp SCEEE-E--CSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCSC
T ss_pred cEEEE-E--eCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCCe
Confidence 11211 1 1223344443 32 355665542 45788888765443
No 124
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=64.30 E-value=36 Score=32.94 Aligned_cols=106 Identities=9% Similarity=-0.018 Sum_probs=53.8
Q ss_pred cceEEEEeecCCCCCccCceEEEEEECCccceeee-cCCCccccCCCCeeEEEE--eCCeEEEEEecCCCCEEEEEEECC
Q 045559 206 NGACHWLVPFGAFHPLCCHYVILSFDMSDEVFEEI-LGPNCLLEISPKHTVFGL--YNDSLSFLVFDERESCFDIWTMKE 282 (335)
Q Consensus 206 ~G~~ywl~~~~~~~~~~~~~~i~~fD~~~e~~~~i-~~P~~~~~~~~~~~~l~~--~~g~L~~~~~~~~~~~~~IW~l~~ 282 (335)
+|.|||..... ...|.++|+....-..+ ... .. ....|+. .+++|+++... ...|.+.-++.
T Consensus 507 ~g~ly~td~~~-------~~~I~~~~~dG~~~~~l~~~~--l~----~PnGlavd~~~~~LY~aD~~--~~~I~~~d~dG 571 (699)
T 1n7d_A 507 HGFMYWTDWGT-------PAKIKKGGLNGVDIYSLVTEN--IQ----WPNGITLDLLSGRLYWVDSK--LHSISSIDVNG 571 (699)
T ss_dssp SSCCEECCCSS-------SCCEEBCCSSSCCCCEESCSS--CS----SCCCEEECTTTCCEEEEETT--TTEEEEECSSS
T ss_pred CCcEEEcccCC-------CCeEEEEeCCCCCeeEEEeCC--CC----CccEEEEeccCCEEEEEecC--CCeEEEEccCC
Confidence 68899976432 24688888764433332 111 11 1112343 35678888754 44444433332
Q ss_pred CCceeEEEEecc-CCceeeeEEEeeC-CEEEEEe-cCCeEEEEeCCCCcee
Q 045559 283 RYHWTKEFSTTP-ILAVDAPIGFWKN-DTFFIRS-NTEELLLYDPNSEEII 330 (335)
Q Consensus 283 ~~~W~~~~~i~~-~~~~~~~~~~~~~-~~il~~~-~~~~l~~yd~~~~~~~ 330 (335)
.-.+ .+.. ...+..|.++.-+ +.+|+.. ..++|.++|+.+++..
T Consensus 572 --~~~~--~~~~~~~~~~~P~glavd~~~lywtd~~~~~V~~~d~~~G~~~ 618 (699)
T 1n7d_A 572 --GNRK--TILEDEKRLAHPFSLAVFEDKVFWTDIINEAIFSANRLTGSDV 618 (699)
T ss_dssp --SCCE--EECCCSSSCSSCCCCEEETTEEEEECSTTTCEEEEETTTEEEE
T ss_pred --CceE--EEEecCCcCCCceEeEEECCEEEEEeCCCCeEEEEEccCCCce
Confidence 1111 2211 1234556665533 4455544 3568999998766543
No 125
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=64.06 E-value=87 Score=28.58 Aligned_cols=94 Identities=10% Similarity=0.148 Sum_probs=49.7
Q ss_pred EEEEEECCccceeeecCCCccccCCCCeeEEEEe-CCeEEEEEecCCCCEEEEEEECCCCceeEEEEeccCCceeeeEEE
Q 045559 226 VILSFDMSDEVFEEILGPNCLLEISPKHTVFGLY-NDSLSFLVFDERESCFDIWTMKERYHWTKEFSTTPILAVDAPIGF 304 (335)
Q Consensus 226 ~i~~fD~~~e~~~~i~~P~~~~~~~~~~~~l~~~-~g~L~~~~~~~~~~~~~IW~l~~~~~W~~~~~i~~~~~~~~~~~~ 304 (335)
.|-.+|...+....+..... .-..+... +|++.+.... ...+.+|-++. ....++.....-..-+++
T Consensus 408 ~v~~~~~~~~~~~~~~~~~~------~v~~~~~s~d~~~l~~~~~--d~~v~~w~~~~----~~~~~~~~~~~~v~~~~~ 475 (577)
T 2ymu_A 408 TVKLWNRNGQLLQTLTGHSS------SVWGVAFSPDDQTIASASD--DKTVKLWNRNG----QLLQTLTGHSSSVRGVAF 475 (577)
T ss_dssp EEEEECTTCCEEEEEECCSS------CEEEEEECTTSSEEEEEET--TSEEEEEETTS----CEEEEEECCSSCEEEEEE
T ss_pred EEEEEeCCCCEEEEecCCCC------CeEEEEECCCCCEEEEEcC--CCEEEEEECCC----CEEEEEcCCCCCEEEEEE
Confidence 56666755444433322211 11223333 4554444443 56899998654 223333223333455666
Q ss_pred eeCCEEEEE-ecCCeEEEEeCCCCceee
Q 045559 305 WKNDTFFIR-SNTEELLLYDPNSEEIID 331 (335)
Q Consensus 305 ~~~~~il~~-~~~~~l~~yd~~~~~~~~ 331 (335)
.+++++++. ..++.+..||..++..+.
T Consensus 476 spd~~~las~~~d~~i~iw~~~~~~~~~ 503 (577)
T 2ymu_A 476 SPDGQTIASASDDKTVKLWNRNGQLLQT 503 (577)
T ss_dssp CTTSCEEEEEETTSEEEEEETTSCEEEE
T ss_pred cCCCCEEEEEeCCCEEEEEcCCCCEEEE
Confidence 778886554 456778889976655544
No 126
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=64.01 E-value=69 Score=27.39 Aligned_cols=31 Identities=19% Similarity=0.016 Sum_probs=19.9
Q ss_pred eeeEEEeeCCEEEE-EecCCeEEEEeCCCCce
Q 045559 299 DAPIGFWKNDTFFI-RSNTEELLLYDPNSEEI 329 (335)
Q Consensus 299 ~~~~~~~~~~~il~-~~~~~~l~~yd~~~~~~ 329 (335)
..-+.+.+++.+++ ...++.+..||+++.+.
T Consensus 337 v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~ 368 (408)
T 4a11_B 337 VDCCVFQSNFQELYSGSRDCNILAWVPSLYEP 368 (408)
T ss_dssp EEEEEEETTTTEEEEEETTSCEEEEEECC---
T ss_pred EEEEEEcCCCCEEEEECCCCeEEEEeCCCCCc
Confidence 44456667777555 44577899999988654
No 127
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=63.51 E-value=57 Score=27.36 Aligned_cols=68 Identities=9% Similarity=0.030 Sum_probs=41.6
Q ss_pred CeEEEEEecCCCCEEEEEEECCCCceeEEEEeccCCceeeeEEEeeCCEEEE-EecCCeEEEEeCCCCceee
Q 045559 261 DSLSFLVFDERESCFDIWTMKERYHWTKEFSTTPILAVDAPIGFWKNDTFFI-RSNTEELLLYDPNSEEIID 331 (335)
Q Consensus 261 g~L~~~~~~~~~~~~~IW~l~~~~~W~~~~~i~~~~~~~~~~~~~~~~~il~-~~~~~~l~~yd~~~~~~~~ 331 (335)
|.+.+.+.. ...+.||-++. ........+.....-..-+.+.++++.++ ...++.+..||+++++...
T Consensus 54 g~~l~~~~~--dg~i~iw~~~~-~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~ 122 (368)
T 3mmy_A 54 GNFLIAGSW--ANDVRCWEVQD-SGQTIPKAQQMHTGPVLDVCWSDDGSKVFTASCDKTAKMWDLSSNQAIQ 122 (368)
T ss_dssp SEEEEEEET--TSEEEEEEECT-TSCEEEEEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEE
T ss_pred ceEEEEECC--CCcEEEEEcCC-CCceeEEEeccccCCEEEEEECcCCCEEEEEcCCCcEEEEEcCCCCcee
Confidence 465555554 57899999986 23233233322333344455566777544 5557789999999887654
No 128
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=62.83 E-value=66 Score=26.80 Aligned_cols=100 Identities=5% Similarity=0.036 Sum_probs=52.9
Q ss_pred eEEEEEECCccceeeecCCCccccCCCCeeEEEEe-CCe-EEEEEecC---CCCEEEEEEECCCCceeEEEEeccC-Cce
Q 045559 225 YVILSFDMSDEVFEEILGPNCLLEISPKHTVFGLY-NDS-LSFLVFDE---RESCFDIWTMKERYHWTKEFSTTPI-LAV 298 (335)
Q Consensus 225 ~~i~~fD~~~e~~~~i~~P~~~~~~~~~~~~l~~~-~g~-L~~~~~~~---~~~~~~IW~l~~~~~W~~~~~i~~~-~~~ 298 (335)
..|..+|.++.++..+. . .. ....++.. +|+ |++..... ....+.+|-++. ........+... ...
T Consensus 169 ~~v~~~d~~~g~~~~~~-~--~~----~p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~-~~l~~~~~~~~~~~~~ 240 (305)
T 3dr2_A 169 HSVYRLPPDGSPLQRMA-D--LD----HPNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRD-GALHDRRHFASVPDGL 240 (305)
T ss_dssp EEEEEECSSSCCCEEEE-E--ES----SEEEEEECTTSSEEEEEECCC---CCCEEEEEEEET-TEEEEEEEEECCSSSC
T ss_pred CeEEEEcCCCCcEEEEe-c--CC----CCcceEEcCCCCEEEEEecCCcCCCCCEEEEEEecC-CCccCCeEEEECCCCC
Confidence 57999999877776653 1 11 11123333 555 66665431 014555555544 322211111011 112
Q ss_pred eeeEEEeeCCEEEEEecCCeEEEEeCCCCceeecc
Q 045559 299 DAPIGFWKNDTFFIRSNTEELLLYDPNSEEIIDFQ 333 (335)
Q Consensus 299 ~~~~~~~~~~~il~~~~~~~l~~yd~~~~~~~~v~ 333 (335)
..-+.+..+|.+++.. ...|..||++++.+..+.
T Consensus 241 pdgi~~d~~G~lwv~~-~~gv~~~~~~g~~~~~~~ 274 (305)
T 3dr2_A 241 PDGFCVDRGGWLWSSS-GTGVCVFDSDGQLLGHIP 274 (305)
T ss_dssp CCSEEECTTSCEEECC-SSEEEEECTTSCEEEEEE
T ss_pred CCeEEECCCCCEEEec-CCcEEEECCCCCEEEEEE
Confidence 2234555678877666 446999999888777654
No 129
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=62.34 E-value=22 Score=34.49 Aligned_cols=110 Identities=8% Similarity=0.000 Sum_probs=50.7
Q ss_pred ecceEEEEeecCCCCCccCceEEEEEECCccceeeecCCCccccCCCCeeEEEEeCCeEEEEEecCCCCEEEEEEECCCC
Q 045559 205 HNGACHWLVPFGAFHPLCCHYVILSFDMSDEVFEEILGPNCLLEISPKHTVFGLYNDSLSFLVFDERESCFDIWTMKERY 284 (335)
Q Consensus 205 ~~G~~ywl~~~~~~~~~~~~~~i~~fD~~~e~~~~i~~P~~~~~~~~~~~~l~~~~g~L~~~~~~~~~~~~~IW~l~~~~ 284 (335)
.+|.|||.... ...|.++|+.......+- ...... ...+.+--.+|.|++..... ...|.+..|+. .
T Consensus 463 ~~g~LY~tD~~--------~~~I~v~d~dg~~~~~l~-~~~~~~--P~giavDp~~g~ly~td~~~-~~~I~~~~~dG-~ 529 (699)
T 1n7d_A 463 IHSNIYWTDSV--------LGTVSVADTKGVKRKTLF-REQGSK--PRAIVVDPVHGFMYWTDWGT-PAKIKKGGLNG-V 529 (699)
T ss_dssp SSSBCEECCTT--------TSCEEEEBSSSCCEEEEC-CCSSCC--CCCEECCSSSSCCEECCCSS-SCCEEBCCSSS-C
T ss_pred eCCcEEEEecc--------CCeEEEEecCCCceEEEE-eCCCCC--cceEEEccCCCcEEEcccCC-CCeEEEEeCCC-C
Confidence 46899996543 336888888765544331 111110 01121112356666654321 13333322332 1
Q ss_pred ceeEEEEeccCCceeeeEEE--eeC-CEEEEEec-CCeEEEEeCCCCceee
Q 045559 285 HWTKEFSTTPILAVDAPIGF--WKN-DTFFIRSN-TEELLLYDPNSEEIID 331 (335)
Q Consensus 285 ~W~~~~~i~~~~~~~~~~~~--~~~-~~il~~~~-~~~l~~yd~~~~~~~~ 331 (335)
. .+ .+ -...+..|.++ ..+ +.||+... ..+|.++|+.+...+.
T Consensus 530 ~-~~--~l-~~~~l~~PnGlavd~~~~~LY~aD~~~~~I~~~d~dG~~~~~ 576 (699)
T 1n7d_A 530 D-IY--SL-VTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKT 576 (699)
T ss_dssp C-CC--EE-SCSSCSSCCCEEECTTTCCEEEEETTTTEEEEECSSSSCCEE
T ss_pred C-ee--EE-EeCCCCCccEEEEeccCCEEEEEecCCCeEEEEccCCCceEE
Confidence 1 11 12 11223345443 333 45666553 5678888887654433
No 130
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=62.14 E-value=66 Score=28.93 Aligned_cols=111 Identities=9% Similarity=0.093 Sum_probs=59.6
Q ss_pred eeeeec-----ceEEEEeecCCCCCccCceEEEEEECCccceeeecCCCccccCCCCeeEEE-EeCCeEEEEEecCCCCE
Q 045559 201 DCTYHN-----GACHWLVPFGAFHPLCCHYVILSFDMSDEVFEEILGPNCLLEISPKHTVFG-LYNDSLSFLVFDERESC 274 (335)
Q Consensus 201 ~~v~~~-----G~~ywl~~~~~~~~~~~~~~i~~fD~~~e~~~~i~~P~~~~~~~~~~~~l~-~~~g~L~~~~~~~~~~~ 274 (335)
.++.++ |.+||.... ..|..+|+++.....+..+.. ....++ ..+|.|++.........
T Consensus 142 ~gvavd~~s~~g~Lyv~D~~---------~~I~~id~~~g~v~~~~~~~~------~P~giavd~dG~lyVad~~~~~~~ 206 (433)
T 4hw6_A 142 WRMMFDPNSNYDDLYWVGQR---------DAFRHVDFVNQYVDIKTTNIG------QCADVNFTLNGDMVVVDDQSSDTN 206 (433)
T ss_dssp CEEEECTTTTTCEEEEECBT---------SCEEEEETTTTEEEEECCCCS------CEEEEEECTTCCEEEEECCSCTTS
T ss_pred ceEEEccccCCCEEEEEeCC---------CCEEEEECCCCEEEEeecCCC------CccEEEECCCCCEEEEcCCCCccc
Confidence 466666 899987653 269999998887776633211 112233 33566777765321112
Q ss_pred EEEEEECCCCceeEEEEeccCCceeee--EEEee-CCEEEEEec-CCeEEEEeCCCCce
Q 045559 275 FDIWTMKERYHWTKEFSTTPILAVDAP--IGFWK-NDTFFIRSN-TEELLLYDPNSEEI 329 (335)
Q Consensus 275 ~~IW~l~~~~~W~~~~~i~~~~~~~~~--~~~~~-~~~il~~~~-~~~l~~yd~~~~~~ 329 (335)
-.+..+.....|.....+ + .+..| +++.+ +|.+++... ..+++.||+++++.
T Consensus 207 ~gv~~~~~~~~~~~~~~~-~--~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~ 262 (433)
T 4hw6_A 207 TGIYLFTRASGFTERLSL-C--NARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTL 262 (433)
T ss_dssp EEEEEECGGGTTCCEEEE-E--ECSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCE
T ss_pred ceEEEEECCCCeeccccc-c--ccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeE
Confidence 223333332333321222 1 12233 44455 567777654 55789999886665
No 131
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=61.94 E-value=70 Score=26.80 Aligned_cols=67 Identities=12% Similarity=0.127 Sum_probs=39.5
Q ss_pred CCeEEEEEecCCCCEEEEEEECCCCceeEEEEeccCCceeeeEEEeeCCEEEE-EecCCeEEEEeCCCCcee
Q 045559 260 NDSLSFLVFDERESCFDIWTMKERYHWTKEFSTTPILAVDAPIGFWKNDTFFI-RSNTEELLLYDPNSEEII 330 (335)
Q Consensus 260 ~g~L~~~~~~~~~~~~~IW~l~~~~~W~~~~~i~~~~~~~~~~~~~~~~~il~-~~~~~~l~~yd~~~~~~~ 330 (335)
+|+..++... .+.+.+|-++.. ......+.....-..-+.+.++++.++ ...++.+..||+++.+..
T Consensus 186 ~~~~l~~~~~--dg~i~i~d~~~~--~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~ 253 (369)
T 3zwl_B 186 KGKYIIAGHK--DGKISKYDVSNN--YEYVDSIDLHEKSISDMQFSPDLTYFITSSRDTNSFLVDVSTLQVL 253 (369)
T ss_dssp GGCEEEEEET--TSEEEEEETTTT--TEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEE
T ss_pred CCCEEEEEcC--CCEEEEEECCCC--cEeEEEEecCCCceeEEEECCCCCEEEEecCCceEEEEECCCCcee
Confidence 4554444444 578999988752 233344422233344455566777554 456778999999886653
No 132
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=61.74 E-value=71 Score=26.76 Aligned_cols=58 Identities=10% Similarity=0.072 Sum_probs=32.5
Q ss_pred CCEEEEEEECCCCceeEEEEeccCCc------------eeeeEEEeeCCEEEE-EecCCeEEEEeCCCCce
Q 045559 272 ESCFDIWTMKERYHWTKEFSTTPILA------------VDAPIGFWKNDTFFI-RSNTEELLLYDPNSEEI 329 (335)
Q Consensus 272 ~~~~~IW~l~~~~~W~~~~~i~~~~~------------~~~~~~~~~~~~il~-~~~~~~l~~yd~~~~~~ 329 (335)
...+.||-++....-.....+..... -..-+.+.+++++++ ...++.+..||.++++.
T Consensus 237 dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~i~iwd~~~~~~ 307 (368)
T 3mmy_A 237 EGRVAIHYINPPNPAKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDARTK 307 (368)
T ss_dssp TSEEEEEESSCSCHHHHSEEEECSEEC----CCCEEECCEEEEEECTTTCCEEEEETTSCEEEEETTTTEE
T ss_pred CCcEEEEecCCCCccccceeeeeeecccccccccccccceEEEEEecCCCEEEEEccCCeEEEEECCCCcE
Confidence 57899999987211011112210110 133345566777554 45677899999988654
No 133
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=61.13 E-value=82 Score=27.33 Aligned_cols=97 Identities=8% Similarity=-0.011 Sum_probs=53.8
Q ss_pred eEEEEEECCccceee-ecCCCccccCCCCeeEEEEe-CCeE-EEEEecCCCCEEEEEEECCCCceeEEEEeccCCceeee
Q 045559 225 YVILSFDMSDEVFEE-ILGPNCLLEISPKHTVFGLY-NDSL-SFLVFDERESCFDIWTMKERYHWTKEFSTTPILAVDAP 301 (335)
Q Consensus 225 ~~i~~fD~~~e~~~~-i~~P~~~~~~~~~~~~l~~~-~g~L-~~~~~~~~~~~~~IW~l~~~~~W~~~~~i~~~~~~~~~ 301 (335)
..|..+|+.+.+... +..+.. -..+... +|.. +..+... .+.+.||-+.. ........+........-
T Consensus 284 ~~i~i~d~~~~~~~~~~~~~~~-------v~~~~~s~~~~~l~~~~g~~-dg~i~v~~~~~-~~~~~~~~~~~h~~~v~~ 354 (401)
T 4aez_A 284 KQIHFWNAATGARVNTVDAGSQ-------VTSLIWSPHSKEIMSTHGFP-DNNLSIWSYSS-SGLTKQVDIPAHDTRVLY 354 (401)
T ss_dssp CEEEEEETTTCCEEEEEECSSC-------EEEEEECSSSSEEEEEECTT-TCEEEEEEEET-TEEEEEEEEECCSSCCCE
T ss_pred CEEEEEECCCCCEEEEEeCCCc-------EEEEEECCCCCeEEEEeecC-CCcEEEEecCC-ccceeEEEecCCCCCEEE
Confidence 467778877654332 232211 1223322 5554 4333332 67899999986 666666555223333444
Q ss_pred EEEeeCCEEEE-EecCCeEEEEeCCCCcee
Q 045559 302 IGFWKNDTFFI-RSNTEELLLYDPNSEEII 330 (335)
Q Consensus 302 ~~~~~~~~il~-~~~~~~l~~yd~~~~~~~ 330 (335)
+.+.++|..++ ...++.+..||+++++..
T Consensus 355 ~~~s~dg~~l~s~~~dg~i~iw~~~~~~~~ 384 (401)
T 4aez_A 355 SALSPDGRILSTAASDENLKFWRVYDGDHV 384 (401)
T ss_dssp EEECTTSSEEEEECTTSEEEEEECCC----
T ss_pred EEECCCCCEEEEEeCCCcEEEEECCCCccc
Confidence 56667887655 455778999999887643
No 134
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=60.63 E-value=1.3e+02 Score=29.26 Aligned_cols=142 Identities=9% Similarity=0.096 Sum_probs=73.2
Q ss_pred ceEEEEEcCCCcceecCcccc-cccccCCCceeeee--cceEEEEeecCCCCCccCceEEEEEECCccceeeecCCCccc
Q 045559 171 RQVFIYSFSDNSWRNFQGFEF-GMYDLDEVLDCTYH--NGACHWLVPFGAFHPLCCHYVILSFDMSDEVFEEILGPNCLL 247 (335)
Q Consensus 171 ~~~~vyss~~~~W~~~~~~p~-~~~~~~~~~~~v~~--~G~~ywl~~~~~~~~~~~~~~i~~fD~~~e~~~~i~~P~~~~ 247 (335)
..+..|+.+++.|+.....+- ...... -.++.. +|. .|++..+ ..+..||..++++..+..+....
T Consensus 469 ~Gl~~~~~~~~~~~~~~~~~~~~~~~~~--i~~i~~d~~g~-lWigt~~--------~Gl~~~~~~~~~~~~~~~~~~l~ 537 (781)
T 3v9f_A 469 AGVFVIDLASKKVIHHYDTSNSQLLENF--VRSIAQDSEGR-FWIGTFG--------GGVGIYTPDMQLVRKFNQYEGFC 537 (781)
T ss_dssp TEEEEEESSSSSCCEEECTTTSSCSCSC--EEEEEECTTCC-EEEEESS--------SCEEEECTTCCEEEEECTTTTCS
T ss_pred CceEEEeCCCCeEEecccCcccccccce--eEEEEEcCCCC-EEEEEcC--------CCEEEEeCCCCeEEEccCCCCCC
Confidence 367788888888865532210 010000 112222 455 4666542 25888999988888774433221
Q ss_pred cCCCCeeEEEE-eCCeEEEEEecCCCCEEEEEEECC-CCceeEEEEec-cCCc-eeeeEEEeeCCEEEEEecCCeEEEEe
Q 045559 248 EISPKHTVFGL-YNDSLSFLVFDERESCFDIWTMKE-RYHWTKEFSTT-PILA-VDAPIGFWKNDTFFIRSNTEELLLYD 323 (335)
Q Consensus 248 ~~~~~~~~l~~-~~g~L~~~~~~~~~~~~~IW~l~~-~~~W~~~~~i~-~~~~-~~~~~~~~~~~~il~~~~~~~l~~yd 323 (335)
. ..-..+.+ .+|.|.+.... .+ |..++. ...+.. +... .++. ...-+....+|.+.+.... .|..||
T Consensus 538 ~--~~i~~i~~d~~g~lWi~T~~----Gl-v~~~d~~~~~~~~-~~~~~gl~~~~i~~i~~d~~g~lW~~t~~-Gl~~~~ 608 (781)
T 3v9f_A 538 S--NTINQIYRSSKGQMWLATGE----GL-VCFPSARNFDYQV-FQRKEGLPNTHIRAISEDKNGNIWASTNT-GISCYI 608 (781)
T ss_dssp C--SCEEEEEECTTSCEEEEETT----EE-EEESCTTTCCCEE-ECGGGTCSCCCCCEEEECSSSCEEEECSS-CEEEEE
T ss_pred C--CeeEEEEECCCCCEEEEECC----Cc-eEEECCCCCcEEE-ccccCCCCCceEEEEEECCCCCEEEEcCC-ceEEEE
Confidence 1 12233444 36667766531 12 134444 334322 2221 1111 1222333446778887754 599999
Q ss_pred CCCCceeec
Q 045559 324 PNSEEIIDF 332 (335)
Q Consensus 324 ~~~~~~~~v 332 (335)
+++++++..
T Consensus 609 ~~~~~~~~~ 617 (781)
T 3v9f_A 609 TSKKCFYTY 617 (781)
T ss_dssp TTTTEEEEE
T ss_pred CCCCceEEe
Confidence 999887764
No 135
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=60.59 E-value=72 Score=30.55 Aligned_cols=113 Identities=12% Similarity=0.199 Sum_probs=58.6
Q ss_pred eeeeecceEEEEeecCCCCCccCceEEEEEECCc--cceeee-cCCCcccc---CCCCeeEEEEeCCeEEEEEecCCCCE
Q 045559 201 DCTYHNGACHWLVPFGAFHPLCCHYVILSFDMSD--EVFEEI-LGPNCLLE---ISPKHTVFGLYNDSLSFLVFDERESC 274 (335)
Q Consensus 201 ~~v~~~G~~ywl~~~~~~~~~~~~~~i~~fD~~~--e~~~~i-~~P~~~~~---~~~~~~~l~~~~g~L~~~~~~~~~~~ 274 (335)
.+++.+|.+|..+.. ..+.++|.++ +.|+.- ..+..... .......++..+|++++...+ ..
T Consensus 61 ~P~v~~g~vyv~~~~---------~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~d---g~ 128 (668)
T 1kv9_A 61 TPLFHDGVIYTSMSW---------SRVIAVDAASGKELWRYDPEVAKVKARTSCCDAVNRGVALWGDKVYVGTLD---GR 128 (668)
T ss_dssp CCEEETTEEEEEEGG---------GEEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEEBTEEEEECTT---SE
T ss_pred CCEEECCEEEEECCC---------CeEEEEECCCChhceEECCCCCccccccccccCCccceEEECCEEEEEcCC---CE
Confidence 378899999997763 3799999754 455532 22211100 000112234456666654422 33
Q ss_pred EEEEEECC---CCceeEEEEecc--CCceeeeEEEeeCCEEEEEec------CCeEEEEeCCCCce
Q 045559 275 FDIWTMKE---RYHWTKEFSTTP--ILAVDAPIGFWKNDTFFIRSN------TEELLLYDPNSEEI 329 (335)
Q Consensus 275 ~~IW~l~~---~~~W~~~~~i~~--~~~~~~~~~~~~~~~il~~~~------~~~l~~yd~~~~~~ 329 (335)
|..++. +..|.....-.+ ......|+. .++.+++... +..|+.||++|++.
T Consensus 129 --l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v--~~~~v~vg~~~~~~~~~g~v~a~D~~tG~~ 190 (668)
T 1kv9_A 129 --LIALDAKTGKAIWSQQTTDPAKPYSITGAPRV--VKGKVIIGNGGAEYGVRGFVSAYDADTGKL 190 (668)
T ss_dssp --EEEEETTTCCEEEEEECSCTTSSCBCCSCCEE--ETTEEEECCBCTTTCCBCEEEEEETTTCCE
T ss_pred --EEEEECCCCCEeeeeccCCCCCcceecCCCEE--ECCEEEEeCCCCCcCCCCEEEEEECCCCcE
Confidence 344443 456765321100 011134443 2566666443 35799999988764
No 136
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=60.35 E-value=75 Score=26.57 Aligned_cols=66 Identities=6% Similarity=-0.032 Sum_probs=39.8
Q ss_pred CCe-EEEEEecCCCCEEEEEEECC--C--------------CceeEEEEeccCCceeeeEEEeeCCEEEE--EecCCeEE
Q 045559 260 NDS-LSFLVFDERESCFDIWTMKE--R--------------YHWTKEFSTTPILAVDAPIGFWKNDTFFI--RSNTEELL 320 (335)
Q Consensus 260 ~g~-L~~~~~~~~~~~~~IW~l~~--~--------------~~W~~~~~i~~~~~~~~~~~~~~~~~il~--~~~~~~l~ 320 (335)
+|+ +.+.... .+.+.||-++. . ..+.....+........-+.+.++|+.++ ...++.+.
T Consensus 270 ~~~~~l~~~~~--dg~i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~s~~~d~~i~ 347 (357)
T 3i2n_A 270 QNRELFLTAGG--AGGLHLWKYEYPIQRSKKDSEGIEMGVAGSVSLLQNVTLSTQPISSLDWSPDKRGLCVCSSFDQTVR 347 (357)
T ss_dssp TEEEEEEEEET--TSEEEEEEEECCSCC--CCTTSCCCCCCCEEEEEEEEECCSSCEEEEEECSSSTTEEEEEETTSEEE
T ss_pred CCCcEEEEEeC--CCcEEEeecCCCcccccccCCCCccccccccceeeccccCCCCeeEEEEcCCCCeEEEEecCCCcEE
Confidence 455 4444443 57899999875 1 13455555532333344556677887554 45578899
Q ss_pred EEeCCCC
Q 045559 321 LYDPNSE 327 (335)
Q Consensus 321 ~yd~~~~ 327 (335)
.||.++.
T Consensus 348 iw~~~~~ 354 (357)
T 3i2n_A 348 VLIVTKL 354 (357)
T ss_dssp EEEECC-
T ss_pred EEECCCc
Confidence 9998764
No 137
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=59.25 E-value=43 Score=28.03 Aligned_cols=108 Identities=6% Similarity=0.039 Sum_probs=55.9
Q ss_pred cce-EEEEeecCCCCCccCceEEEEEECCccceeeecCCCccccCCCCeeEEEE-eCCeEEEEEecCCCCEEEEEEECCC
Q 045559 206 NGA-CHWLVPFGAFHPLCCHYVILSFDMSDEVFEEILGPNCLLEISPKHTVFGL-YNDSLSFLVFDERESCFDIWTMKER 283 (335)
Q Consensus 206 ~G~-~ywl~~~~~~~~~~~~~~i~~fD~~~e~~~~i~~P~~~~~~~~~~~~l~~-~~g~L~~~~~~~~~~~~~IW~l~~~ 283 (335)
+|. +||..... ..|..+|.. ...+.+..|... ...++. -+|+|.+.... ...+.+|-.+
T Consensus 55 ~g~~l~~~d~~~--------~~i~~~~~~-g~~~~~~~~~~~------~~gl~~d~dG~l~v~~~~--~~~v~~~~~~-- 115 (305)
T 3dr2_A 55 AQRTLVWSDLVG--------RRVLGWRED-GTVDVLLDATAF------TNGNAVDAQQRLVHCEHG--RRAITRSDAD-- 115 (305)
T ss_dssp GGTEEEEEETTT--------TEEEEEETT-SCEEEEEESCSC------EEEEEECTTSCEEEEETT--TTEEEEECTT--
T ss_pred CCCEEEEEECCC--------CEEEEEeCC-CCEEEEeCCCCc------cceeeECCCCCEEEEECC--CCEEEEECCC--
Confidence 454 88887543 368888984 445555434321 112333 36777665543 3444444332
Q ss_pred CceeEEEEeccCCce--eeeEEEeeCCEEEEEe------------------cCCeEEEEeCCCCceeec
Q 045559 284 YHWTKEFSTTPILAV--DAPIGFWKNDTFFIRS------------------NTEELLLYDPNSEEIIDF 332 (335)
Q Consensus 284 ~~W~~~~~i~~~~~~--~~~~~~~~~~~il~~~------------------~~~~l~~yd~~~~~~~~v 332 (335)
...........-... ..-+.+.++|.+++.. ....|+.||+++++++.+
T Consensus 116 g~~~~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~ 184 (305)
T 3dr2_A 116 GQAHLLVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRM 184 (305)
T ss_dssp SCEEEEECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEE
T ss_pred CCEEEEEeccCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEE
Confidence 333222111011111 2224556688888841 124699999988877654
No 138
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=58.61 E-value=74 Score=25.96 Aligned_cols=94 Identities=11% Similarity=0.088 Sum_probs=54.2
Q ss_pred eEEEEEECCccceee-ecCCCccccCCCCeeEEEEe-CCeEEEEEecCCCCEEEEEEECCCCceeEEEEeccCCceeeeE
Q 045559 225 YVILSFDMSDEVFEE-ILGPNCLLEISPKHTVFGLY-NDSLSFLVFDERESCFDIWTMKERYHWTKEFSTTPILAVDAPI 302 (335)
Q Consensus 225 ~~i~~fD~~~e~~~~-i~~P~~~~~~~~~~~~l~~~-~g~L~~~~~~~~~~~~~IW~l~~~~~W~~~~~i~~~~~~~~~~ 302 (335)
..|..+|+.+.+... +..... .-..+... +|.|+. ... .+.+.||-++. ..-...... ...-..-+
T Consensus 205 g~i~i~d~~~~~~~~~~~~~~~------~i~~~~~~~~~~l~~-~~~--dg~v~iwd~~~-~~~~~~~~~--~~~~i~~~ 272 (313)
T 3odt_A 205 GLIKLVDMHTGDVLRTYEGHES------FVYCIKLLPNGDIVS-CGE--DRTVRIWSKEN-GSLKQVITL--PAISIWSV 272 (313)
T ss_dssp SEEEEEETTTCCEEEEEECCSS------CEEEEEECTTSCEEE-EET--TSEEEEECTTT-CCEEEEEEC--SSSCEEEE
T ss_pred CeEEEEECCchhhhhhhhcCCc------eEEEEEEecCCCEEE-Eec--CCEEEEEECCC-CceeEEEec--cCceEEEE
Confidence 478888987654322 222211 12233333 444332 222 57899998876 433333322 22223445
Q ss_pred EEeeCCEEEEEecCCeEEEEeCCCCcee
Q 045559 303 GFWKNDTFFIRSNTEELLLYDPNSEEII 330 (335)
Q Consensus 303 ~~~~~~~il~~~~~~~l~~yd~~~~~~~ 330 (335)
.+.++++++....++.+..||++++++.
T Consensus 273 ~~~~~~~~~~~~~dg~i~iw~~~~~~~~ 300 (313)
T 3odt_A 273 DCMSNGDIIVGSSDNLVRIFSQEKSRWA 300 (313)
T ss_dssp EECTTSCEEEEETTSCEEEEESCGGGCC
T ss_pred EEccCCCEEEEeCCCcEEEEeCCCCcee
Confidence 5667888777777889999999988764
No 139
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=58.10 E-value=79 Score=26.13 Aligned_cols=98 Identities=8% Similarity=-0.064 Sum_probs=50.7
Q ss_pred eEEEEEECCcccee-eecCCCccccCCCCeeEEEE-eCCe-EEEEEecCCCCEEEEEEECCCCceeEEEEeccCCc----
Q 045559 225 YVILSFDMSDEVFE-EILGPNCLLEISPKHTVFGL-YNDS-LSFLVFDERESCFDIWTMKERYHWTKEFSTTPILA---- 297 (335)
Q Consensus 225 ~~i~~fD~~~e~~~-~i~~P~~~~~~~~~~~~l~~-~~g~-L~~~~~~~~~~~~~IW~l~~~~~W~~~~~i~~~~~---- 297 (335)
..|..+|+.+.+.. .+..+..... ... +.. -+|+ +++.... ...+.+|-++. ..-...... +...
T Consensus 11 ~~v~~~d~~~~~~~~~~~~~~~~~~--~~~--~~~s~dg~~l~v~~~~--~~~v~~~d~~~-~~~~~~~~~-~~~~~~~~ 82 (337)
T 1pby_B 11 DKLVVIDTEKMAVDKVITIADAGPT--PMV--PMVAPGGRIAYATVNK--SESLVKIDLVT-GETLGRIDL-STPEERVK 82 (337)
T ss_dssp TEEEEEETTTTEEEEEEECTTCTTC--CCC--EEECTTSSEEEEEETT--TTEEEEEETTT-CCEEEEEEC-CBTTEEEE
T ss_pred CeEEEEECCCCcEEEEEEcCCCCCC--ccc--eEEcCCCCEEEEEeCC--CCeEEEEECCC-CCeEeeEEc-CCcccccc
Confidence 36888898776543 3354431100 011 232 3554 5555543 46777776665 332222222 1110
Q ss_pred eeeeEEEeeCCE-EEEEe------------cCCeEEEEeCCCCcee
Q 045559 298 VDAPIGFWKNDT-FFIRS------------NTEELLLYDPNSEEII 330 (335)
Q Consensus 298 ~~~~~~~~~~~~-il~~~------------~~~~l~~yd~~~~~~~ 330 (335)
...-+.+.++|+ +++.. .+..+..||+++++..
T Consensus 83 ~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~ 128 (337)
T 1pby_B 83 SLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRR 128 (337)
T ss_dssp CTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEE
T ss_pred cccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEE
Confidence 233455667776 44443 3578999999887653
No 140
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=56.84 E-value=88 Score=26.27 Aligned_cols=93 Identities=10% Similarity=0.019 Sum_probs=50.7
Q ss_pred eEEEEEECCccceeee----cCCCccccCCCCeeEEEEe-CCe-EEEEEecCCCCEEEEEEECC--CCceeEEEEeccCC
Q 045559 225 YVILSFDMSDEVFEEI----LGPNCLLEISPKHTVFGLY-NDS-LSFLVFDERESCFDIWTMKE--RYHWTKEFSTTPIL 296 (335)
Q Consensus 225 ~~i~~fD~~~e~~~~i----~~P~~~~~~~~~~~~l~~~-~g~-L~~~~~~~~~~~~~IW~l~~--~~~W~~~~~i~~~~ 296 (335)
..|..+|..+.+...+ ..|. .++.. +|+ |++.... ...+.++-++. .......... .
T Consensus 165 g~v~~~d~~~~~~~~~~~~~~~p~----------gia~~~dg~~lyv~d~~--~~~I~~~~~~~~~~~~~~~~~~~---~ 229 (322)
T 2fp8_A 165 GRLIKYDPSTKETTLLLKELHVPG----------GAEVSADSSFVLVAEFL--SHQIVKYWLEGPKKGTAEVLVKI---P 229 (322)
T ss_dssp EEEEEEETTTTEEEEEEEEESCCC----------EEEECTTSSEEEEEEGG--GTEEEEEESSSTTTTCEEEEEEC---S
T ss_pred ceEEEEeCCCCEEEEeccCCccCc----------ceEECCCCCEEEEEeCC--CCeEEEEECCCCcCCccceEEeC---C
Confidence 5799999987665443 2222 23333 454 6666554 34555555543 1233222222 2
Q ss_pred ceeeeEEEeeCCEEEEEecC-----------CeEEEEeCCCCceeecc
Q 045559 297 AVDAPIGFWKNDTFFIRSNT-----------EELLLYDPNSEEIIDFQ 333 (335)
Q Consensus 297 ~~~~~~~~~~~~~il~~~~~-----------~~l~~yd~~~~~~~~v~ 333 (335)
. ..-+++..+|.+++.... ..+..||++.+.++.+.
T Consensus 230 g-P~gi~~d~~G~l~va~~~~~~~~~~~~~~~~v~~~d~~G~~~~~~~ 276 (322)
T 2fp8_A 230 N-PGNIKRNADGHFWVSSSEELDGNMHGRVDPKGIKFDEFGNILEVIP 276 (322)
T ss_dssp S-EEEEEECTTSCEEEEEEEETTSSTTSCEEEEEEEECTTSCEEEEEE
T ss_pred C-CCCeEECCCCCEEEEecCcccccccCCCccEEEEECCCCCEEEEEE
Confidence 2 223344456778776532 46999999877666554
No 141
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=56.83 E-value=86 Score=26.18 Aligned_cols=136 Identities=7% Similarity=-0.072 Sum_probs=76.5
Q ss_pred CceEEEEEcCCCcceecCcccccccccCCCceeeeecceEEEEeecCCCCCccCceEEEEEECCccc-eeeecCCCcccc
Q 045559 170 SRQVFIYSFSDNSWRNFQGFEFGMYDLDEVLDCTYHNGACHWLVPFGAFHPLCCHYVILSFDMSDEV-FEEILGPNCLLE 248 (335)
Q Consensus 170 ~~~~~vyss~~~~W~~~~~~p~~~~~~~~~~~~v~~~G~~ywl~~~~~~~~~~~~~~i~~fD~~~e~-~~~i~~P~~~~~ 248 (335)
...+.+++..++.= +...+.+...+. ..-+..++.+|..... ...+..+|..+.+ -..++.+ ..
T Consensus 43 ~s~v~~iD~~tg~v--~~~i~l~~~~fg--eGi~~~g~~lyv~t~~--------~~~v~viD~~t~~v~~~i~~g-~~-- 107 (266)
T 2iwa_A 43 RSSVRQVALQTGKV--ENIHKMDDSYFG--EGLTLLNEKLYQVVWL--------KNIGFIYDRRTLSNIKNFTHQ-MK-- 107 (266)
T ss_dssp TCEEEEEETTTCCE--EEEEECCTTCCE--EEEEEETTEEEEEETT--------CSEEEEEETTTTEEEEEEECC-SS--
T ss_pred CCEEEEEECCCCCE--EEEEecCCCcce--EEEEEeCCEEEEEEec--------CCEEEEEECCCCcEEEEEECC-CC--
Confidence 56799999988752 222232211111 1123445688888875 3479999998653 3444544 11
Q ss_pred CCCCeeEEEEeCCeEEEEEecCCCCEEEEEEECCCCceeEEEEeccCCc----eeeeEEE-eeCCEEEEEec-CCeEEEE
Q 045559 249 ISPKHTVFGLYNDSLSFLVFDERESCFDIWTMKERYHWTKEFSTTPILA----VDAPIGF-WKNDTFFIRSN-TEELLLY 322 (335)
Q Consensus 249 ~~~~~~~l~~~~g~L~~~~~~~~~~~~~IW~l~~~~~W~~~~~i~~~~~----~~~~~~~-~~~~~il~~~~-~~~l~~y 322 (335)
....|..-+++|++.. . .+ .|++++. ..-....+| +... +..|..+ ..+|+++.... .+.+.+-
T Consensus 108 ---~g~glt~Dg~~l~vs~-g--s~--~l~viD~-~t~~v~~~I-~Vg~~~~p~~~~nele~~dg~lyvn~~~~~~V~vI 177 (266)
T 2iwa_A 108 ---DGWGLATDGKILYGSD-G--TS--ILYEIDP-HTFKLIKKH-NVKYNGHRVIRLNELEYINGEVWANIWQTDCIARI 177 (266)
T ss_dssp ---SCCEEEECSSSEEEEC-S--SS--EEEEECT-TTCCEEEEE-ECEETTEECCCEEEEEEETTEEEEEETTSSEEEEE
T ss_pred ---CeEEEEECCCEEEEEC-C--CC--eEEEEEC-CCCcEEEEE-EECCCCcccccceeEEEECCEEEEecCCCCeEEEE
Confidence 1223444344577654 2 33 5788886 443455566 3321 1122222 12788876653 6789999
Q ss_pred eCCCCcee
Q 045559 323 DPNSEEII 330 (335)
Q Consensus 323 d~~~~~~~ 330 (335)
|+++++..
T Consensus 178 D~~tg~V~ 185 (266)
T 2iwa_A 178 SAKDGTLL 185 (266)
T ss_dssp ETTTCCEE
T ss_pred ECCCCcEE
Confidence 99998763
No 142
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=56.50 E-value=17 Score=31.27 Aligned_cols=97 Identities=5% Similarity=0.006 Sum_probs=46.7
Q ss_pred EEEEEECCccceeee-cCCCccccCCCCeeEEEEe-CCeEEEEEecCCCCEEEEEEECCCCceeEEEEeccCCceeeeEE
Q 045559 226 VILSFDMSDEVFEEI-LGPNCLLEISPKHTVFGLY-NDSLSFLVFDERESCFDIWTMKERYHWTKEFSTTPILAVDAPIG 303 (335)
Q Consensus 226 ~i~~fD~~~e~~~~i-~~P~~~~~~~~~~~~l~~~-~g~L~~~~~~~~~~~~~IW~l~~~~~W~~~~~i~~~~~~~~~~~ 303 (335)
.|..+|+.+..+..+ .+..... .-..+... +|++.+.... ...+.||-++....|.....+.....-..-+.
T Consensus 34 ~i~iw~~~~~~~~~~~~~~~h~~----~v~~~~~s~~~~~l~s~s~--d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~ 107 (377)
T 3dwl_C 34 QVELYEQDGNGWKHARTFSDHDK----IVTCVDWAPKSNRIVTCSQ--DRNAYVYEKRPDGTWKQTLVLLRLNRAATFVR 107 (377)
T ss_dssp CBCEEEEETTEEEECCCBCCCSS----CEEEEEECTTTCCEEEEET--TSSEEEC------CCCCEEECCCCSSCEEEEE
T ss_pred EEEEEEccCCceEEEEEEecCCc----eEEEEEEeCCCCEEEEEeC--CCeEEEEEcCCCCceeeeeEecccCCceEEEE
Confidence 466677766654444 2222111 12233333 4554444443 46799999987333666555532333344455
Q ss_pred EeeCCEE-EEEecCCeEEEEeCCCCc
Q 045559 304 FWKNDTF-FIRSNTEELLLYDPNSEE 328 (335)
Q Consensus 304 ~~~~~~i-l~~~~~~~l~~yd~~~~~ 328 (335)
+.++++. +....++.+..||+++++
T Consensus 108 ~~~~~~~l~~~~~d~~i~iwd~~~~~ 133 (377)
T 3dwl_C 108 WSPNEDKFAVGSGARVISVCYFEQEN 133 (377)
T ss_dssp CCTTSSCCEEEESSSCEEECCC----
T ss_pred ECCCCCEEEEEecCCeEEEEEECCcc
Confidence 5567774 445567789999988765
No 143
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=55.97 E-value=1e+02 Score=26.67 Aligned_cols=64 Identities=8% Similarity=0.033 Sum_probs=38.7
Q ss_pred CCeEEEEEecCCCCEEEEEEECCCCceeEEEEec-cCCceeeeEEEeeCCE-EEE-EecCCeEEEEeCCCCc
Q 045559 260 NDSLSFLVFDERESCFDIWTMKERYHWTKEFSTT-PILAVDAPIGFWKNDT-FFI-RSNTEELLLYDPNSEE 328 (335)
Q Consensus 260 ~g~L~~~~~~~~~~~~~IW~l~~~~~W~~~~~i~-~~~~~~~~~~~~~~~~-il~-~~~~~~l~~yd~~~~~ 328 (335)
+|++.+.... .+.+.||-+.. .. ....+. .......-+.+.+++. +++ ...++.+..||+++++
T Consensus 258 ~~~~l~~~~~--dg~i~i~d~~~-~~--~~~~~~~~~~~~v~~~~~~~~~~~~l~~g~~dg~i~vwd~~~~~ 324 (420)
T 3vl1_A 258 YGKYVIAGHV--SGVITVHNVFS-KE--QTIQLPSKFTCSCNSLTVDGNNANYIYAGYENGMLAQWDLRSPE 324 (420)
T ss_dssp TTEEEEEEET--TSCEEEEETTT-CC--EEEEECCTTSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTT
T ss_pred CCCEEEEEcC--CCeEEEEECCC-Cc--eeEEcccccCCCceeEEEeCCCCCEEEEEeCCCeEEEEEcCCCc
Confidence 5665555554 56799998876 32 333331 1233344556666776 554 4557789999998753
No 144
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=55.69 E-value=1.5e+02 Score=28.51 Aligned_cols=188 Identities=12% Similarity=0.089 Sum_probs=92.3
Q ss_pred ccc-eEEEeecCceEEEEecchhhhhcCCC-CcccCCcCCceeeeeEEeecCCCCCeEEEEEEEEecCccccccCCCceE
Q 045559 96 FEG-LFIMFIGGDEIALYNHATRDLKFLPK-LTLIDNLESIYTIMFGLGLDPKCNYYKLVYIVTYHDSELGKVLNDSRQV 173 (335)
Q Consensus 96 ~~G-Ll~~~~~~~~~~V~NP~T~~~~~LP~-~~~~~~~~~~~~~~~~l~~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~~ 173 (335)
.+| +|........+.|||..|++....-. .... ...+.+.|.. .+ ++... ..-.+
T Consensus 65 ~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~---------v~~~~~s~~~-~~-l~~~~------------~dg~i 121 (814)
T 3mkq_A 65 ARKNWIIVGSDDFRIRVFNYNTGEKVVDFEAHPDY---------IRSIAVHPTK-PY-VLSGS------------DDLTV 121 (814)
T ss_dssp GGGTEEEEEETTSEEEEEETTTCCEEEEEECCSSC---------EEEEEECSSS-SE-EEEEE------------TTSEE
T ss_pred CCCCEEEEEeCCCeEEEEECCCCcEEEEEecCCCC---------EEEEEEeCCC-CE-EEEEc------------CCCEE
Confidence 344 44444557889999998876543211 1111 3456666643 22 22221 13367
Q ss_pred EEEEcCCCcceecCcccccccccCCCceeeee---cceEEEEeecCCCCCccCceEEEEEECCccceeee-cCCCccccC
Q 045559 174 FIYSFSDNSWRNFQGFEFGMYDLDEVLDCTYH---NGACHWLVPFGAFHPLCCHYVILSFDMSDEVFEEI-LGPNCLLEI 249 (335)
Q Consensus 174 ~vyss~~~~W~~~~~~p~~~~~~~~~~~~v~~---~G~~ywl~~~~~~~~~~~~~~i~~fD~~~e~~~~i-~~P~~~~~~ 249 (335)
.+|+.+++ |............ -.++.+ +|.....+.. ...|..+|+.+...... ..+...
T Consensus 122 ~vw~~~~~-~~~~~~~~~~~~~----v~~~~~~p~~~~~l~~~~~--------dg~v~vwd~~~~~~~~~~~~~~~~--- 185 (814)
T 3mkq_A 122 KLWNWENN-WALEQTFEGHEHF----VMCVAFNPKDPSTFASGCL--------DRTVKVWSLGQSTPNFTLTTGQER--- 185 (814)
T ss_dssp EEEEGGGT-SEEEEEEECCSSC----EEEEEEETTEEEEEEEEET--------TSEEEEEETTCSSCSEEEECCCTT---
T ss_pred EEEECCCC-ceEEEEEcCCCCc----EEEEEEEcCCCCEEEEEeC--------CCeEEEEECCCCcceeEEecCCCC---
Confidence 88887665 2211111000000 012222 3444443333 23688888865543222 221111
Q ss_pred CCCeeEEEEe---CCeEEEEEecCCCCEEEEEEECCCCceeEEEEeccCCceeeeEEEeeCCEEEE-EecCCeEEEEeCC
Q 045559 250 SPKHTVFGLY---NDSLSFLVFDERESCFDIWTMKERYHWTKEFSTTPILAVDAPIGFWKNDTFFI-RSNTEELLLYDPN 325 (335)
Q Consensus 250 ~~~~~~l~~~---~g~L~~~~~~~~~~~~~IW~l~~~~~W~~~~~i~~~~~~~~~~~~~~~~~il~-~~~~~~l~~yd~~ 325 (335)
.-..+... +|.+.++... ...+.+|-++. .. ...++........-+.+.+++.+++ ...++.+..||+.
T Consensus 186 --~v~~~~~~~~~~~~~l~~~~~--dg~i~~~d~~~-~~--~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vwd~~ 258 (814)
T 3mkq_A 186 --GVNYVDYYPLPDKPYMITASD--DLTIKIWDYQT-KS--CVATLEGHMSNVSFAVFHPTLPIIISGSEDGTLKIWNSS 258 (814)
T ss_dssp --CCCEEEECCSTTCCEEEEECT--TSEEEEEETTT-TE--EEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETT
T ss_pred --CEEEEEEEECCCCCEEEEEeC--CCEEEEEECCC-Cc--EEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCeEEEEECC
Confidence 11122222 5555555544 57899998876 32 3334422233344455667777554 4456789999998
Q ss_pred CCce
Q 045559 326 SEEI 329 (335)
Q Consensus 326 ~~~~ 329 (335)
+.+.
T Consensus 259 ~~~~ 262 (814)
T 3mkq_A 259 TYKV 262 (814)
T ss_dssp TCSE
T ss_pred CCcE
Confidence 7554
No 145
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=55.54 E-value=1.4e+02 Score=28.32 Aligned_cols=191 Identities=8% Similarity=-0.024 Sum_probs=94.8
Q ss_pred eEEEEecch-hhhhcCCCCcccCCcCCceeeeeEEeecCCCCCeEEEEEEEEecCccccccCCCceEEEEEcCCCcceec
Q 045559 108 EIALYNHAT-RDLKFLPKLTLIDNLESIYTIMFGLGLDPKCNYYKLVYIVTYHDSELGKVLNDSRQVFIYSFSDNSWRNF 186 (335)
Q Consensus 108 ~~~V~NP~T-~~~~~LP~~~~~~~~~~~~~~~~~l~~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~~~vyss~~~~W~~~ 186 (335)
.++++|..| ++...+...... ......+.+ |. +++-++.... . ......+.+++..++..+.+
T Consensus 264 ~l~~~d~~~~~~~~~~~~~~~~------~~~~~~~~~-pD-g~~l~~~~~~---~-----~~~~~~i~~~d~~~g~~~~~ 327 (741)
T 2ecf_A 264 KLGVISPAEQAQTQWIDLGKEQ------DIYLARVNW-RD-PQHLSFQRQS---R-----DQKKLDLVEVTLASNQQRVL 327 (741)
T ss_dssp EEEEECSSTTCCCEEECCCSCS------SEEEEEEEE-EE-TTEEEEEEEE---T-----TSSEEEEEEEETTTCCEEEE
T ss_pred EEEEEECCCCCceEEecCCCCc------ceEEEEEEe-CC-CCEEEEEEec---c-----cCCeEEEEEEECCCCceEEE
Confidence 788999998 886665433111 111334555 43 3444333321 1 12345677888888776544
Q ss_pred Cccccc--ccccCCCceeeeecceEEEEeecCCCCCccCceEEEEEECCccceeeecCCCccccCCCCeeEE--EEeCCe
Q 045559 187 QGFEFG--MYDLDEVLDCTYHNGACHWLVPFGAFHPLCCHYVILSFDMSDEVFEEILGPNCLLEISPKHTVF--GLYNDS 262 (335)
Q Consensus 187 ~~~p~~--~~~~~~~~~~v~~~G~~ywl~~~~~~~~~~~~~~i~~fD~~~e~~~~i~~P~~~~~~~~~~~~l--~~~~g~ 262 (335)
...... ..... .....-+|.+++....+. ...|..+|.... ...+ ..... .-..+ ..-+|+
T Consensus 328 ~~~~~~~~~~~~~--~~~~spdg~~~~~~~~~g------~~~l~~~~~~~~-~~~l--~~~~~----~v~~~~~~s~dg~ 392 (741)
T 2ecf_A 328 AHETSPTWVPLHN--SLRFLDDGSILWSSERTG------FQHLYRIDSKGK-AAAL--THGNW----SVDELLAVDEKAG 392 (741)
T ss_dssp EEEECSSCCCCCS--CCEECTTSCEEEEECTTS------SCEEEEECSSSC-EEES--CCSSS----CEEEEEEEETTTT
T ss_pred EEcCCCCcCCcCC--ceEECCCCeEEEEecCCC------ccEEEEEcCCCC-eeee--eecce----EEEeEeEEeCCCC
Confidence 211110 00000 013334777777665432 457888887655 3333 22111 11122 233665
Q ss_pred -EEEEEecCCCCEEEEEEECCCCceeEEEEeccCCceeeeEEEeeCCEEE-EEec----CCeEEEEeCCCCceeec
Q 045559 263 -LSFLVFDERESCFDIWTMKERYHWTKEFSTTPILAVDAPIGFWKNDTFF-IRSN----TEELLLYDPNSEEIIDF 332 (335)
Q Consensus 263 -L~~~~~~~~~~~~~IW~l~~~~~W~~~~~i~~~~~~~~~~~~~~~~~il-~~~~----~~~l~~yd~~~~~~~~v 332 (335)
|++.........+.||.++.... ....+ ....-...+.+.+||+.+ +... ...++.+|.++++.+.+
T Consensus 393 ~l~~~~~~~~~~~~~l~~~~~~g~--~~~~l-~~~~~~~~~~~spdg~~l~~~~~~~~~p~~~~l~~~~~~~~~~l 465 (741)
T 2ecf_A 393 LAYFRAGIESARESQIYAVPLQGG--QPQRL-SKAPGMHSASFARNASVYVDSWSNNSTPPQIELFRANGEKIATL 465 (741)
T ss_dssp EEEEEECSSCTTCBEEEEEETTCC--CCEEC-CCSCSEEEEEECTTSSEEEEEEEETTEEEEEEEEETTSCEEECS
T ss_pred EEEEEEeCCCCceEEEEEEEcCCC--Ceeec-ccCCCceEEEECCCCCEEEEEecCCCCCCeEEEEEcCCCeEEEe
Confidence 55555443334788999874121 12233 112223445667787744 3322 13688899887766544
No 146
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=55.34 E-value=95 Score=26.20 Aligned_cols=95 Identities=11% Similarity=0.020 Sum_probs=53.7
Q ss_pred EEEEEECCccceeee-cCCCccccCCCCeeEEEEe-CCeEEEEEecCCCCEEEEEEECCCCceeEEEEecc-CCceeeeE
Q 045559 226 VILSFDMSDEVFEEI-LGPNCLLEISPKHTVFGLY-NDSLSFLVFDERESCFDIWTMKERYHWTKEFSTTP-ILAVDAPI 302 (335)
Q Consensus 226 ~i~~fD~~~e~~~~i-~~P~~~~~~~~~~~~l~~~-~g~L~~~~~~~~~~~~~IW~l~~~~~W~~~~~i~~-~~~~~~~~ 302 (335)
.|..+|+.+.+...+ ..+... .-..+... +|.+.+.+.. .+.+.||-+.. ..-. ..++.. ...-..-+
T Consensus 150 ~i~~wd~~~~~~~~~~~~~~~~-----~i~~~~~~pdg~~lasg~~--dg~i~iwd~~~-~~~~-~~~~~~~h~~~v~~l 220 (343)
T 3lrv_A 150 TIGFQSYEDDSQYIVHSAKSDV-----EYSSGVLHKDSLLLALYSP--DGILDVYNLSS-PDQA-SSRFPVDEEAKIKEV 220 (343)
T ss_dssp CEEEEESSSSCEEEEECCCSSC-----CCCEEEECTTSCEEEEECT--TSCEEEEESSC-TTSC-CEECCCCTTSCEEEE
T ss_pred cEEEEECCCCcEEEEEecCCCC-----ceEEEEECCCCCEEEEEcC--CCEEEEEECCC-CCCC-ccEEeccCCCCEEEE
Confidence 577888877665433 222211 11123332 5555555544 57899999887 2211 123311 23334556
Q ss_pred EEeeCCEEEEEecCCeEEEEeCCCCce
Q 045559 303 GFWKNDTFFIRSNTEELLLYDPNSEEI 329 (335)
Q Consensus 303 ~~~~~~~il~~~~~~~l~~yd~~~~~~ 329 (335)
.+.++|..++...+..+..||+++.+.
T Consensus 221 ~fs~~g~~l~s~~~~~v~iwd~~~~~~ 247 (343)
T 3lrv_A 221 KFADNGYWMVVECDQTVVCFDLRKDVG 247 (343)
T ss_dssp EECTTSSEEEEEESSBEEEEETTSSTT
T ss_pred EEeCCCCEEEEEeCCeEEEEEcCCCCc
Confidence 667788876655555899999988653
No 147
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=54.62 E-value=1.5e+02 Score=28.57 Aligned_cols=95 Identities=9% Similarity=0.052 Sum_probs=54.7
Q ss_pred EEEEEECCccceeee-cCCCccccCCCCeeEEEEe-C--CeEEEEEecCCCCEEEEEEECCCCceeEEEEeccCCceeee
Q 045559 226 VILSFDMSDEVFEEI-LGPNCLLEISPKHTVFGLY-N--DSLSFLVFDERESCFDIWTMKERYHWTKEFSTTPILAVDAP 301 (335)
Q Consensus 226 ~i~~fD~~~e~~~~i-~~P~~~~~~~~~~~~l~~~-~--g~L~~~~~~~~~~~~~IW~l~~~~~W~~~~~i~~~~~~~~~ 301 (335)
.|..+|+.++....+ .+..... .-..+... + |.+.+.+.. .+.+.||-++. ..|...........-..-
T Consensus 32 ~I~vwd~~~~~~~~~~~l~~h~~----~V~~l~~s~~~~~~~l~s~s~--Dg~I~vwd~~~-~~~~~~~~~~~h~~~V~~ 104 (753)
T 3jro_A 32 TIKIFEVEGETHKLIDTLTGHEG----PVWRVDWAHPKFGTILASCSY--DGKVLIWKEEN-GRWSQIAVHAVHSASVNS 104 (753)
T ss_dssp EEEEEEEETTEEEEEEEECCCSS----CEEEEEECCTTSCSEEEEEET--TSCEEEEEEET-TEEEEEEEECCCSSCEEE
T ss_pred cEEEEecCCCCCccceeccCCcC----ceEEEEecCCCCCCEEEEEeC--CCeEEEEECCC-CcccccccccCCCCCeEE
Confidence 566677665444433 2221111 12233332 2 555555544 57899999987 777776666323333445
Q ss_pred EEEeeC--CEEE-EEecCCeEEEEeCCCC
Q 045559 302 IGFWKN--DTFF-IRSNTEELLLYDPNSE 327 (335)
Q Consensus 302 ~~~~~~--~~il-~~~~~~~l~~yd~~~~ 327 (335)
+.+.++ ++++ ....++.+..||++++
T Consensus 105 v~~sp~~~~~~l~sgs~dg~I~vwdl~~~ 133 (753)
T 3jro_A 105 VQWAPHEYGPLLLVASSDGKVSVVEFKEN 133 (753)
T ss_dssp EEECCGGGCSEEEEEETTSEEEEEECCSS
T ss_pred EEECCCCCCCEEEEEeCCCcEEEEEeecC
Confidence 555666 6654 4556788999999876
No 148
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=54.47 E-value=98 Score=26.13 Aligned_cols=197 Identities=8% Similarity=-0.069 Sum_probs=93.7
Q ss_pred cceEEEee-cCceEEEEecchhhhhcCCCCcccCCcCCceeeeeEEeecCCCCCeEEEEEEEEecCccccccCCCceEEE
Q 045559 97 EGLFIMFI-GGDEIALYNHATRDLKFLPKLTLIDNLESIYTIMFGLGLDPKCNYYKLVYIVTYHDSELGKVLNDSRQVFI 175 (335)
Q Consensus 97 ~GLl~~~~-~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~l~~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~~~v 175 (335)
+|.+.+.. ....++++||.|++...++.. .. ..++.+++.. .+ +.. . ...+.+
T Consensus 60 ~~~l~~~d~~~~~i~~~d~~~~~~~~~~~~-~~---------v~~i~~~~dg-~l--~v~-~------------~~gl~~ 113 (326)
T 2ghs_A 60 SGTAWWFNILERELHELHLASGRKTVHALP-FM---------GSALAKISDS-KQ--LIA-S------------DDGLFL 113 (326)
T ss_dssp TTEEEEEEGGGTEEEEEETTTTEEEEEECS-SC---------EEEEEEEETT-EE--EEE-E------------TTEEEE
T ss_pred CCEEEEEECCCCEEEEEECCCCcEEEEECC-Cc---------ceEEEEeCCC-eE--EEE-E------------CCCEEE
Confidence 45444444 466889999999876654321 11 2345556542 22 212 1 113777
Q ss_pred EEcCCCcceecCccccc--ccccCCCceeeeecceEEEEeecCCCCCccCceEEEEEECCccceeeecCCCccccCCCCe
Q 045559 176 YSFSDNSWRNFQGFEFG--MYDLDEVLDCTYHNGACHWLVPFGAFHPLCCHYVILSFDMSDEVFEEILGPNCLLEISPKH 253 (335)
Q Consensus 176 yss~~~~W~~~~~~p~~--~~~~~~~~~~v~~~G~~ywl~~~~~~~~~~~~~~i~~fD~~~e~~~~i~~P~~~~~~~~~~ 253 (335)
|+.+++..+.+...+.. ..... .-.+--+|.+|+-...... ......|..+| +.+...+. .... ..
T Consensus 114 ~d~~~g~~~~~~~~~~~~~~~~~~--~i~~d~~G~l~v~~~~~~~--~~~~~~l~~~~--~g~~~~~~--~~~~----~~ 181 (326)
T 2ghs_A 114 RDTATGVLTLHAELESDLPGNRSN--DGRMHPSGALWIGTMGRKA--ETGAGSIYHVA--KGKVTKLF--ADIS----IP 181 (326)
T ss_dssp EETTTCCEEEEECSSTTCTTEEEE--EEEECTTSCEEEEEEETTC--CTTCEEEEEEE--TTEEEEEE--EEES----SE
T ss_pred EECCCCcEEEEeeCCCCCCCCCCC--CEEECCCCCEEEEeCCCcC--CCCceEEEEEe--CCcEEEee--CCCc----cc
Confidence 88877777654322111 00000 0123336776543321100 00035788888 34444331 1110 11
Q ss_pred eEEEEe-CCe-EEEEEecCCCCEEEEEEEC-CCC-cee--EE-EEeccCCceeeeEEEeeCCEEEEEe-cCCeEEEEeCC
Q 045559 254 TVFGLY-NDS-LSFLVFDERESCFDIWTMK-ERY-HWT--KE-FSTTPILAVDAPIGFWKNDTFFIRS-NTEELLLYDPN 325 (335)
Q Consensus 254 ~~l~~~-~g~-L~~~~~~~~~~~~~IW~l~-~~~-~W~--~~-~~i~~~~~~~~~~~~~~~~~il~~~-~~~~l~~yd~~ 325 (335)
..++.. +|+ |++.... ...+.+|-++ ... ... +. ..+........-+.+..+|.+++.. ....|..||++
T Consensus 182 ~~i~~s~dg~~lyv~~~~--~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~lwva~~~~~~v~~~d~~ 259 (326)
T 2ghs_A 182 NSICFSPDGTTGYFVDTK--VNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWGEGAVDRYDTD 259 (326)
T ss_dssp EEEEECTTSCEEEEEETT--TCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEETTTEEEEECTT
T ss_pred CCeEEcCCCCEEEEEECC--CCEEEEEEcccccCCcccCceEEEECCCCCCCCCeeEECCCCCEEEEEeCCCEEEEECCC
Confidence 234433 564 6665543 4566666665 112 211 11 1221011222333444567787765 35689999997
Q ss_pred CCceeecc
Q 045559 326 SEEIIDFQ 333 (335)
Q Consensus 326 ~~~~~~v~ 333 (335)
++..+.+.
T Consensus 260 g~~~~~i~ 267 (326)
T 2ghs_A 260 GNHIARYE 267 (326)
T ss_dssp CCEEEEEE
T ss_pred CCEEEEEE
Confidence 76666554
No 149
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=53.61 E-value=97 Score=29.79 Aligned_cols=115 Identities=14% Similarity=0.165 Sum_probs=59.6
Q ss_pred eeeeecceEEEEeecCCCCCccCceEEEEEECCc--cceeee-cCCCcccc---CCCCeeEEEEeCCeEEEEEecCCCCE
Q 045559 201 DCTYHNGACHWLVPFGAFHPLCCHYVILSFDMSD--EVFEEI-LGPNCLLE---ISPKHTVFGLYNDSLSFLVFDERESC 274 (335)
Q Consensus 201 ~~v~~~G~~ywl~~~~~~~~~~~~~~i~~fD~~~--e~~~~i-~~P~~~~~---~~~~~~~l~~~~g~L~~~~~~~~~~~ 274 (335)
.+++.+|.+|..+.. ..|.++|.++ +.|+.- ..+..... ........+..+|.+++...+ ..
T Consensus 65 ~P~v~~g~vyv~~~~---------~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~v~~~d---g~ 132 (689)
T 1yiq_A 65 TPIVVDGVMYTTGPF---------SVVYALDARDGRLIWKYDPQSDRHRAGEACCDAVNRGVAVWKGKVYVGVLD---GR 132 (689)
T ss_dssp CCEEETTEEEEECGG---------GCEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEETTEEEEECTT---SE
T ss_pred cCEEECCEEEEEcCC---------CeEEEEECCCCceeEEEcCCCCccccccccccCCCCccEEECCEEEEEccC---CE
Confidence 378899999997753 3699999754 456532 22211100 000112234566766665432 33
Q ss_pred EEEEEECC-CCceeEEEEecc---CCceeeeEEEeeCCEEEEEec------CCeEEEEeCCCCce
Q 045559 275 FDIWTMKE-RYHWTKEFSTTP---ILAVDAPIGFWKNDTFFIRSN------TEELLLYDPNSEEI 329 (335)
Q Consensus 275 ~~IW~l~~-~~~W~~~~~i~~---~~~~~~~~~~~~~~~il~~~~------~~~l~~yd~~~~~~ 329 (335)
+..+-.+. ...|......++ ......|+.+ ++.+++... +..|+.||++|++.
T Consensus 133 l~AlDa~TG~~~W~~~~~~~~~~~~~~~~sP~v~--~g~v~vg~~~~~~~~~g~v~a~D~~tG~~ 195 (689)
T 1yiq_A 133 LEAIDAKTGQRAWSVDTRADHKRSYTITGAPRVV--NGKVVIGNGGAEFGVRGYVTAYDAETGKE 195 (689)
T ss_dssp EEEEETTTCCEEEEEECCSCTTSCCBCCSCCEEE--TTEEEECCBCTTTCCBCEEEEEETTTCCE
T ss_pred EEEEECCCCCEeeeecCcCCCCCCccccCCcEEE--CCEEEEEeCCCccCCCCEEEEEECCCCcE
Confidence 33232222 456765432111 1111345432 667666432 35799999998774
No 150
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=53.01 E-value=1.5e+02 Score=27.93 Aligned_cols=105 Identities=13% Similarity=0.093 Sum_probs=55.4
Q ss_pred ceEEEEEECCccceeeecCCCccccCCCCeeEEEE-eCCe-EEEEEecCCCCEEEEEEECC-CC-ceeEEEEeccCCc--
Q 045559 224 HYVILSFDMSDEVFEEILGPNCLLEISPKHTVFGL-YNDS-LSFLVFDERESCFDIWTMKE-RY-HWTKEFSTTPILA-- 297 (335)
Q Consensus 224 ~~~i~~fD~~~e~~~~i~~P~~~~~~~~~~~~l~~-~~g~-L~~~~~~~~~~~~~IW~l~~-~~-~W~~~~~i~~~~~-- 297 (335)
...|..+|+.+.+...+........ .-..+.- -+|+ |++...........||+.+. +. .......- ....
T Consensus 234 ~~~l~~~d~~~~~~~~~~~~~~~~~---~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~-~~~~~~ 309 (706)
T 2z3z_A 234 HVTVGIYHLATGKTVYLQTGEPKEK---FLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVE-TDKHYV 309 (706)
T ss_dssp EEEEEEEETTTTEEEECCCCSCTTC---EEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEE-ECSSCC
T ss_pred eeEEEEEECCCCceEeeccCCCCce---eEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEc-cCCCeE
Confidence 4578889998877655533211110 1122333 3666 66655554344555665554 23 44433322 1111
Q ss_pred -eeeeEEEee--CCEEEEEec---CCeEEEEeCCCCceeec
Q 045559 298 -VDAPIGFWK--NDTFFIRSN---TEELLLYDPNSEEIIDF 332 (335)
Q Consensus 298 -~~~~~~~~~--~~~il~~~~---~~~l~~yd~~~~~~~~v 332 (335)
....+.+.+ ||++++... ...|+.+|.+++.++.+
T Consensus 310 ~~~~~~~~sp~~dg~~l~~~~~~g~~~l~~~~~~~~~~~~l 350 (706)
T 2z3z_A 310 EPLHPLTFLPGSNNQFIWQSRRDGWNHLYLYDTTGRLIRQV 350 (706)
T ss_dssp CCCSCCEECTTCSSEEEEEECTTSSCEEEEEETTSCEEEEC
T ss_pred CccCCceeecCCCCEEEEEEccCCccEEEEEECCCCEEEec
Confidence 123456677 888766543 24688888777766654
No 151
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=52.30 E-value=1.1e+02 Score=26.09 Aligned_cols=64 Identities=5% Similarity=-0.001 Sum_probs=39.9
Q ss_pred CCeEEEEEecCCCCE-EEEEEECCCCceeEEEEec-c-CCceeeeEEEeeCCEEEE-EecCCeEEEEeCCCCc
Q 045559 260 NDSLSFLVFDERESC-FDIWTMKERYHWTKEFSTT-P-ILAVDAPIGFWKNDTFFI-RSNTEELLLYDPNSEE 328 (335)
Q Consensus 260 ~g~L~~~~~~~~~~~-~~IW~l~~~~~W~~~~~i~-~-~~~~~~~~~~~~~~~il~-~~~~~~l~~yd~~~~~ 328 (335)
+|++.+.+.. ... +.||-++. . ....++. . ...-..-+.+.++|+.++ ...++.+..||++++.
T Consensus 206 ~g~~l~s~s~--d~~~v~iwd~~~-~--~~~~~~~~g~h~~~v~~~~~s~~~~~l~s~s~d~~v~iw~~~~~~ 273 (355)
T 3vu4_A 206 KSDMVATCSQ--DGTIIRVFKTED-G--VLVREFRRGLDRADVVDMKWSTDGSKLAVVSDKWTLHVFEIFNDQ 273 (355)
T ss_dssp TSSEEEEEET--TCSEEEEEETTT-C--CEEEEEECTTCCSCEEEEEECTTSCEEEEEETTCEEEEEESSCCS
T ss_pred CCCEEEEEeC--CCCEEEEEECCC-C--cEEEEEEcCCCCCcEEEEEECCCCCEEEEEECCCEEEEEEccCCC
Confidence 5555444444 455 99999886 3 3444452 1 333345566677888655 4557789999987654
No 152
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=52.19 E-value=1e+02 Score=25.71 Aligned_cols=64 Identities=14% Similarity=0.134 Sum_probs=37.2
Q ss_pred CeEEEEEecCCCCEEEEEEECC-CCceeEEEEeccC--CceeeeEEEeeCCEEEE-EecCCeEEEEeCCC
Q 045559 261 DSLSFLVFDERESCFDIWTMKE-RYHWTKEFSTTPI--LAVDAPIGFWKNDTFFI-RSNTEELLLYDPNS 326 (335)
Q Consensus 261 g~L~~~~~~~~~~~~~IW~l~~-~~~W~~~~~i~~~--~~~~~~~~~~~~~~il~-~~~~~~l~~yd~~~ 326 (335)
|++.+.... .+.+.||-++. ...-.....+... .....-+.+.+++++++ ...++.+..||+.+
T Consensus 299 ~~~l~~~~~--dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~ 366 (366)
T 3k26_A 299 QKMLALGNQ--VGKLYVWDLEVEDPHKAKCTTLTHHKCGAAIRQTSFSRDSSILIAVCDDASIWRWDRLR 366 (366)
T ss_dssp SSEEEEECT--TSCEEEEECCSSSGGGCEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSEEEEEEC--
T ss_pred CcEEEEEec--CCcEEEEECCCCCCccccceEEcccccCCceEEEEeCCCCCeEEEEeCCCEEEEEEecC
Confidence 555444444 57899999987 2222233444212 23344456667887655 45677899999864
No 153
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=52.06 E-value=93 Score=25.17 Aligned_cols=156 Identities=10% Similarity=-0.013 Sum_probs=77.2
Q ss_pred eeEEeecCCCCCeEEEEEEEEecCccccccCCCceEEEEEcCCCcceecCcccccccccCCCceeeee---cceEEEEee
Q 045559 138 MFGLGLDPKCNYYKLVYIVTYHDSELGKVLNDSRQVFIYSFSDNSWRNFQGFEFGMYDLDEVLDCTYH---NGACHWLVP 214 (335)
Q Consensus 138 ~~~l~~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~~~vyss~~~~W~~~~~~p~~~~~~~~~~~~v~~---~G~~ywl~~ 214 (335)
..++.+|+..+...+ . . ...-.+.+|+..++.-+... +... ..+ .++.+ +|.+||...
T Consensus 38 ~~gi~~d~~~~~ly~--~-d----------~~~~~I~~~~~~g~~~~~~~--~~~~-~~p---~~ia~d~~~~~lyv~d~ 98 (267)
T 1npe_A 38 IIGLAFDCVDKVVYW--T-D----------ISEPSIGRASLHGGEPTTII--RQDL-GSP---EGIALDHLGRTIFWTDS 98 (267)
T ss_dssp EEEEEEETTTTEEEE--E-E----------TTTTEEEEEESSSCCCEEEE--CTTC-CCE---EEEEEETTTTEEEEEET
T ss_pred EEEEEEecCCCEEEE--E-E----------CCCCEEEEEecCCCCcEEEE--ECCC-CCc---cEEEEEecCCeEEEEEC
Confidence 467888875543222 2 1 12346777777654322211 1111 111 24433 578998765
Q ss_pred cCCCCCccCceEEEEEECCccceeeecCCCccccCCCCeeEEEEe--CCeEEEEEecCCCCEEEEEEECCCCceeEEEEe
Q 045559 215 FGAFHPLCCHYVILSFDMSDEVFEEILGPNCLLEISPKHTVFGLY--NDSLSFLVFDERESCFDIWTMKERYHWTKEFST 292 (335)
Q Consensus 215 ~~~~~~~~~~~~i~~fD~~~e~~~~i~~P~~~~~~~~~~~~l~~~--~g~L~~~~~~~~~~~~~IW~l~~~~~W~~~~~i 292 (335)
. ...|..+|+....-..+ .+.... ....++.. +|.|++.........+....++. .-.+.. .
T Consensus 99 ~--------~~~I~~~~~~g~~~~~~-~~~~~~----~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg--~~~~~~-~ 162 (267)
T 1npe_A 99 Q--------LDRIEVAKMDGTQRRVL-FDTGLV----NPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDG--TNRRIL-A 162 (267)
T ss_dssp T--------TTEEEEEETTSCSCEEE-ECSSCS----SEEEEEEETTTTEEEEEECCSSSCEEEEEETTS--CCCEEE-E
T ss_pred C--------CCEEEEEEcCCCCEEEE-EECCCC----CccEEEEeeCCCEEEEEECCCCCcEEEEEecCC--CCcEEE-E
Confidence 4 34788899875543333 111111 12234443 67788887542234555444543 212211 1
Q ss_pred ccCCceeeeEE--EeeC-CEEEEEec-CCeEEEEeCCCCcee
Q 045559 293 TPILAVDAPIG--FWKN-DTFFIRSN-TEELLLYDPNSEEII 330 (335)
Q Consensus 293 ~~~~~~~~~~~--~~~~-~~il~~~~-~~~l~~yd~~~~~~~ 330 (335)
...+..|.+ +..+ +.+++... .+++.++|++++..+
T Consensus 163 --~~~~~~P~gia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~ 202 (267)
T 1npe_A 163 --QDNLGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQPGRR 202 (267)
T ss_dssp --CTTCSCEEEEEEETTTTEEEEEETTTTEEEEEETTEEEEE
T ss_pred --ECCCCCCcEEEEcCCCCEEEEEECCCCEEEEEecCCCceE
Confidence 112234444 4444 45665543 568999999876543
No 154
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=52.02 E-value=1.1e+02 Score=26.01 Aligned_cols=96 Identities=9% Similarity=0.085 Sum_probs=48.3
Q ss_pred EEEEEECCccceeee-cCCCccccCCCCeeEEEEe-CCe-EEEEEecCCCCEEEEEEECC-CCceeEEE--------Ee-
Q 045559 226 VILSFDMSDEVFEEI-LGPNCLLEISPKHTVFGLY-NDS-LSFLVFDERESCFDIWTMKE-RYHWTKEF--------ST- 292 (335)
Q Consensus 226 ~i~~fD~~~e~~~~i-~~P~~~~~~~~~~~~l~~~-~g~-L~~~~~~~~~~~~~IW~l~~-~~~W~~~~--------~i- 292 (335)
.|..+|+.+...... ..... .-..+... +|. +.+.+.. .+.+.+|-+.. ...-.... .+
T Consensus 167 ~v~~~d~~~~~~~~~~~~~~~------~v~~~~~~~~~~~ll~~~~~--dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~ 238 (408)
T 4a11_B 167 KVQLCDLKSGSCSHILQGHRQ------EILAVSWSPRYDYILATASA--DSRVKLWDVRRASGCLITLDQHNGKKSQAVE 238 (408)
T ss_dssp SEEEEESSSSCCCEEECCCCS------CEEEEEECSSCTTEEEEEET--TSCEEEEETTCSSCCSEECCTTTTCSCCCTT
T ss_pred eEEEEeCCCcceeeeecCCCC------cEEEEEECCCCCcEEEEEcC--CCcEEEEECCCCCcccccccccccccceeec
Confidence 577788876543222 21111 11223333 344 4545544 56789998876 11111100 00
Q ss_pred ---ccCCceeeeEEEeeCCEEEE-EecCCeEEEEeCCCCce
Q 045559 293 ---TPILAVDAPIGFWKNDTFFI-RSNTEELLLYDPNSEEI 329 (335)
Q Consensus 293 ---~~~~~~~~~~~~~~~~~il~-~~~~~~l~~yd~~~~~~ 329 (335)
........-+.+.++++.++ ...++.+..||+++++.
T Consensus 239 ~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~ 279 (408)
T 4a11_B 239 SANTAHNGKVNGLCFTSDGLHLLTVGTDNRMRLWNSSNGEN 279 (408)
T ss_dssp TSSCSCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCB
T ss_pred cccccccCceeEEEEcCCCCEEEEecCCCeEEEEECCCCcc
Confidence 00111234455566777544 55677899999988654
No 155
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=51.55 E-value=1.1e+02 Score=25.74 Aligned_cols=68 Identities=13% Similarity=-0.022 Sum_probs=37.1
Q ss_pred CCeEEEEEecCCCCEEEEEEECC--------CC-------ceeEEEEeccCCceeeeEEEeeCCEEE-EEecCCeEEEEe
Q 045559 260 NDSLSFLVFDERESCFDIWTMKE--------RY-------HWTKEFSTTPILAVDAPIGFWKNDTFF-IRSNTEELLLYD 323 (335)
Q Consensus 260 ~g~L~~~~~~~~~~~~~IW~l~~--------~~-------~W~~~~~i~~~~~~~~~~~~~~~~~il-~~~~~~~l~~yd 323 (335)
+|.+.+.... .+.+.+|-+.. .. .-.....+........-+.+.++++.+ ....++.+..||
T Consensus 153 ~~~~l~~~~~--dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d 230 (372)
T 1k8k_C 153 NSVLLAAGSC--DFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLAD 230 (372)
T ss_dssp TSSEEEEEET--TSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEEEETTTEEEEEE
T ss_pred CCCEEEEEcC--CCCEEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEECCCCCEEEEEeCCCEEEEEE
Confidence 4555444444 56789998642 01 112333331122223445556677654 455677899999
Q ss_pred CCCCce
Q 045559 324 PNSEEI 329 (335)
Q Consensus 324 ~~~~~~ 329 (335)
+++++.
T Consensus 231 ~~~~~~ 236 (372)
T 1k8k_C 231 ADKKMA 236 (372)
T ss_dssp GGGTTE
T ss_pred CCCCce
Confidence 877654
No 156
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=50.41 E-value=1.3e+02 Score=26.31 Aligned_cols=201 Identities=9% Similarity=0.038 Sum_probs=95.7
Q ss_pred cceEEEee-------------cCceEEEEecch--hhhhcCCCCcc-cCCcCCceeeeeEEeecCC-CCCeEEEEEEEEe
Q 045559 97 EGLFIMFI-------------GGDEIALYNHAT--RDLKFLPKLTL-IDNLESIYTIMFGLGLDPK-CNYYKLVYIVTYH 159 (335)
Q Consensus 97 ~GLl~~~~-------------~~~~~~V~NP~T--~~~~~LP~~~~-~~~~~~~~~~~~~l~~d~~-~~~ykVv~~~~~~ 159 (335)
+|++.+.+ ....+++++|.+ .+.++|..... . ...++. ..|+.+.+. .+...++.+-.
T Consensus 60 ~G~~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~~~~~~~l~~~g~~~-~~~~f~--PhGi~~~~d~dg~~~L~Vvnh-- 134 (355)
T 3sre_A 60 NGLAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAVSELEIIGNTL-DISSFN--PHGISTFIDDDNTVYLLVVNH-- 134 (355)
T ss_dssp TSEEEEEECCC-----------CCEEEEEETTSSSCCEEECEEECSSC-CGGGCC--EEEEEEEECTTCCEEEEEEEC--
T ss_pred CCeEEEEeccccCCCcccCCCCCCeEEEEecCCCCCceEEEEccCCCC-CcCcee--eeeeEEEECCCCcEEEEEEEC--
Confidence 67777765 256789999984 33344432211 0 000111 455555442 34445555422
Q ss_pred cCccccccCCCceEEEEEcCC--CcceecCcccccccccCCCceeeeecceEEEEeecCCCC---------CccCceEEE
Q 045559 160 DSELGKVLNDSRQVFIYSFSD--NSWRNFQGFEFGMYDLDEVLDCTYHNGACHWLVPFGAFH---------PLCCHYVIL 228 (335)
Q Consensus 160 ~~~~~~~~~~~~~~~vyss~~--~~W~~~~~~p~~~~~~~~~~~~v~~~G~~ywl~~~~~~~---------~~~~~~~i~ 228 (335)
......+|+|.... +....+....-.....+ +.-.+.-+|.+|.-....... .......+.
T Consensus 135 -------~~~~s~ielf~~d~~~~~~~~~~~~~g~~~~~p-ND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vy 206 (355)
T 3sre_A 135 -------PGSSSTVEVFKFQEEEKSLLHLKTIRHKLLPSV-NDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVT 206 (355)
T ss_dssp -------STTCCEEEEEEEETTTTEEEEEEEECCTTCSSE-EEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEE
T ss_pred -------CCCCCeEEEEEEECCCCEEEEEeccccCCCCCC-ceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEE
Confidence 12346788887654 33333322111111111 123556667766543211000 000145799
Q ss_pred EEECCccceeee----cCCCccccCCCCeeEEEEe-CCe-EEEEEecCCCCEEEEEEECCCCceeEEEEeccCCceeeeE
Q 045559 229 SFDMSDEVFEEI----LGPNCLLEISPKHTVFGLY-NDS-LSFLVFDERESCFDIWTMKERYHWTKEFSTTPILAVDAPI 302 (335)
Q Consensus 229 ~fD~~~e~~~~i----~~P~~~~~~~~~~~~l~~~-~g~-L~~~~~~~~~~~~~IW~l~~~~~W~~~~~i~~~~~~~~~~ 302 (335)
.+|.. +.+.+ ..|+ -++.. +|+ |++.... ...+..+-++..........+ .+.....-+
T Consensus 207 r~d~~--~~~~~~~~l~~pN----------Gia~spDg~~lYvadt~--~~~I~~~~~~~~g~l~~~~~~-~~~g~PDGi 271 (355)
T 3sre_A 207 YYSPN--DVRVVAEGFDFAN----------GINISPDGKYVYIAELL--AHKIHVYEKHANWTLTPLRVL-SFDTLVDNI 271 (355)
T ss_dssp EECTT--CCEEEEEEESSEE----------EEEECTTSSEEEEEEGG--GTEEEEEEECTTSCEEEEEEE-ECSSEEEEE
T ss_pred EEECC--eEEEeecCCcccC----------cceECCCCCEEEEEeCC--CCeEEEEEECCCCcEecCEEE-eCCCCCceE
Confidence 99885 23322 2222 24444 554 7777665 456666666543334443344 344334445
Q ss_pred EEee-CCEEEEE-e-cCCeEEEEeCC
Q 045559 303 GFWK-NDTFFIR-S-NTEELLLYDPN 325 (335)
Q Consensus 303 ~~~~-~~~il~~-~-~~~~l~~yd~~ 325 (335)
.+.. +|.+++. . +..+++.||++
T Consensus 272 ~vD~e~G~lwva~~~~g~~v~~~~P~ 297 (355)
T 3sre_A 272 SVDPVTGDLWVGCHPNGMRIFFYDAE 297 (355)
T ss_dssp EECTTTCCEEEEEESCHHHHHSCCTT
T ss_pred EEeCCCCcEEEEecCCceEEEEECCC
Confidence 5555 4888873 3 33456777776
No 157
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=49.85 E-value=1.2e+02 Score=25.64 Aligned_cols=101 Identities=7% Similarity=0.051 Sum_probs=54.0
Q ss_pred ceEEEEeecCCCCCccCceEEEEEECCccceeeecCCCccccCCCCeeEEE-EeCCeEEEEEecCCCCEEEEEEECC-CC
Q 045559 207 GACHWLVPFGAFHPLCCHYVILSFDMSDEVFEEILGPNCLLEISPKHTVFG-LYNDSLSFLVFDERESCFDIWTMKE-RY 284 (335)
Q Consensus 207 G~~ywl~~~~~~~~~~~~~~i~~fD~~~e~~~~i~~P~~~~~~~~~~~~l~-~~~g~L~~~~~~~~~~~~~IW~l~~-~~ 284 (335)
|.+||.... ...|..+|..+.+...+..|... ..++ .-+|++.+.. . .. |+.++. ..
T Consensus 61 ~~l~~~d~~--------~~~i~~~d~~~~~~~~~~~~~~v-------~~i~~~~dg~l~v~~-~---~g--l~~~d~~~g 119 (326)
T 2ghs_A 61 GTAWWFNIL--------ERELHELHLASGRKTVHALPFMG-------SALAKISDSKQLIAS-D---DG--LFLRDTATG 119 (326)
T ss_dssp TEEEEEEGG--------GTEEEEEETTTTEEEEEECSSCE-------EEEEEEETTEEEEEE-T---TE--EEEEETTTC
T ss_pred CEEEEEECC--------CCEEEEEECCCCcEEEEECCCcc-------eEEEEeCCCeEEEEE-C---CC--EEEEECCCC
Confidence 689998754 33799999988877666555322 1223 3477776654 2 23 444443 34
Q ss_pred ceeEEEEeccC-C--ceeeeEEEeeCCEEEEEec-------CCeEEEEeCCCCceee
Q 045559 285 HWTKEFSTTPI-L--AVDAPIGFWKNDTFFIRSN-------TEELLLYDPNSEEIID 331 (335)
Q Consensus 285 ~W~~~~~i~~~-~--~~~~~~~~~~~~~il~~~~-------~~~l~~yd~~~~~~~~ 331 (335)
........ +. . ....-+.+.++|++++... ...|+.|| +++++.
T Consensus 120 ~~~~~~~~-~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~~~~ 173 (326)
T 2ghs_A 120 VLTLHAEL-ESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KGKVTK 173 (326)
T ss_dssp CEEEEECS-STTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TTEEEE
T ss_pred cEEEEeeC-CCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--CCcEEE
Confidence 44332222 11 0 1122334455777766542 24678887 455443
No 158
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=49.62 E-value=1.2e+02 Score=25.68 Aligned_cols=69 Identities=9% Similarity=0.138 Sum_probs=41.0
Q ss_pred CCeEEEEEecCCCCEEEEEEECCCCceeEEEEeccCCceeeeEEEeeCCEEEE-EecCCeEEEEeCCCCcee
Q 045559 260 NDSLSFLVFDERESCFDIWTMKERYHWTKEFSTTPILAVDAPIGFWKNDTFFI-RSNTEELLLYDPNSEEII 330 (335)
Q Consensus 260 ~g~L~~~~~~~~~~~~~IW~l~~~~~W~~~~~i~~~~~~~~~~~~~~~~~il~-~~~~~~l~~yd~~~~~~~ 330 (335)
+|++.+.+.. ...+.||-++....+.....+.....-..-+.+.+++++++ ...++.+..||.+++++.
T Consensus 116 ~~~~l~s~s~--D~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~i~~w~~~~~~~~ 185 (345)
T 3fm0_A 116 SGNLLATCSR--DKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQELLASASYDDTVKLYREEEDDWV 185 (345)
T ss_dssp TSSEEEEEET--TSCEEEEEECTTSCEEEEEEECCCCSCEEEEEECSSSSCEEEEETTSCEEEEEEETTEEE
T ss_pred CCCEEEEEEC--CCeEEEEECCCCCCeEEEEEecCcCCCeEEEEECCCCCEEEEEeCCCcEEEEEecCCCEE
Confidence 5555444444 46799999987444544444422222234455566777544 445677888888777653
No 159
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=49.35 E-value=2.2e+02 Score=28.67 Aligned_cols=50 Identities=4% Similarity=-0.126 Sum_probs=29.8
Q ss_pred CEEEEEEECC-CCceeEEEEeccCCceeeeEEEeeCCEEEEEecCCeEEEEeCCCCc
Q 045559 273 SCFDIWTMKE-RYHWTKEFSTTPILAVDAPIGFWKNDTFFIRSNTEELLLYDPNSEE 328 (335)
Q Consensus 273 ~~~~IW~l~~-~~~W~~~~~i~~~~~~~~~~~~~~~~~il~~~~~~~l~~yd~~~~~ 328 (335)
....||..+- ........ .-...+.+.+||+.++......+..+|.++++
T Consensus 589 ~~~~l~~~d~~~~~~~~l~------~~v~~~~~S~DG~~l~~~~~~~i~~~d~~~~~ 639 (1045)
T 1k32_A 589 EKGVLLKYDVKTRKVTEVK------NNLTDLRLSADRKTVMVRKDDGKIYTFPLEKP 639 (1045)
T ss_dssp CCEEEEEEETTTCCEEEEE------EEEEEEEECTTSCEEEEEETTSCEEEEESSCT
T ss_pred CCceEEEEECCCCcEEEee------cCcceEEECCCCCEEEEEcCCcEEEEeCccCc
Confidence 3456676654 34433222 11244567888885555444479999998877
No 160
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=48.97 E-value=1.4e+02 Score=26.27 Aligned_cols=27 Identities=4% Similarity=0.082 Sum_probs=19.4
Q ss_pred cccceEEEeecCceEEEEecchhhhhc
Q 045559 95 PFEGLFIMFIGGDEIALYNHATRDLKF 121 (335)
Q Consensus 95 s~~GLl~~~~~~~~~~V~NP~T~~~~~ 121 (335)
+.+|+++.......+.|||..|++...
T Consensus 171 ~~~~~l~s~s~dg~i~vwd~~~~~~~~ 197 (464)
T 3v7d_B 171 AHGGILVSGSTDRTVRVWDIKKGCCTH 197 (464)
T ss_dssp CSTTEEEEEETTSCEEEEETTTTEEEE
T ss_pred cCCCEEEEEeCCCCEEEEECCCCcEEE
Confidence 445666655567889999999887543
No 161
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=48.91 E-value=2e+02 Score=28.18 Aligned_cols=155 Identities=9% Similarity=-0.014 Sum_probs=80.9
Q ss_pred eeEEeecCCCCCeEEEEEEEEecCccccccCCCceEEEEEcCCCcceecCcccccccccCCCceeeee---cceEEEEee
Q 045559 138 MFGLGLDPKCNYYKLVYIVTYHDSELGKVLNDSRQVFIYSFSDNSWRNFQGFEFGMYDLDEVLDCTYH---NGACHWLVP 214 (335)
Q Consensus 138 ~~~l~~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~~~vyss~~~~W~~~~~~p~~~~~~~~~~~~v~~---~G~~ywl~~ 214 (335)
..++++|...+. |+.. . .....++++++.+..-+.+.. .....+ .++.+ +|.|||...
T Consensus 473 P~GLAvD~~~~~--LY~t-D----------~~~~~I~v~~ldG~~~~~l~~---~~l~~P---~gIaVDp~~g~LYwtD~ 533 (791)
T 3m0c_C 473 PDGLAVDWIHSN--IYWT-D----------SVLGTVSVADTKGVKRKTLFR---ENGSKP---RAIVVDPVHGFMYWTDW 533 (791)
T ss_dssp CCEEEEETTTTE--EEEE-E----------TTTTEEEEEETTSSSEEEEEE---CTTCCE---EEEEEETTTTEEEEEEC
T ss_pred cceeeeeecCCc--EEEE-e----------cCCCeEEEEeCCCCeEEEEEe---CCCCCc---ceEEEecCCCCEEEecC
Confidence 457888876543 2222 1 224477888887655443321 011112 34554 589999875
Q ss_pred cCCCCCccCceEEEEEECCccceeeecCCCccccCCCCeeEEEE--eCCeEEEEEecCCCCEEEEEEECCCCceeEEEEe
Q 045559 215 FGAFHPLCCHYVILSFDMSDEVFEEILGPNCLLEISPKHTVFGL--YNDSLSFLVFDERESCFDIWTMKERYHWTKEFST 292 (335)
Q Consensus 215 ~~~~~~~~~~~~i~~fD~~~e~~~~i~~P~~~~~~~~~~~~l~~--~~g~L~~~~~~~~~~~~~IW~l~~~~~W~~~~~i 292 (335)
.. ...|.++|+....-..+- ..... ....|+. .+|+|+++... ...|..--++.... ++. +
T Consensus 534 g~-------~~~I~~~~~dG~~~~~lv-~~~l~----~P~GLavD~~~~~LYwaD~~--~~~I~~~d~dG~~~--~~v-~ 596 (791)
T 3m0c_C 534 GT-------PAKIKKGGLNGVDIYSLV-TENIQ----WPNGITLDLLSGRLYWVDSK--LHSISSIDVNGGNR--KTI-L 596 (791)
T ss_dssp SS-------SCEEEEEETTSCCEEEEE-CSSCS----CEEEEEEETTTTEEEEEETT--TTEEEEEETTSCSC--EEE-E
T ss_pred CC-------CCeEEEEecCCCceEEEE-eCCCC----CceEEEEecCCCeEEEEeCC--CCcEEEEecCCCce--EEE-e
Confidence 32 247999998765443331 11111 1223443 47889998754 44444444433222 211 2
Q ss_pred ccCCceeeeEEEee-CCEEEEEec-CCeEEEEeCCCCc
Q 045559 293 TPILAVDAPIGFWK-NDTFFIRSN-TEELLLYDPNSEE 328 (335)
Q Consensus 293 ~~~~~~~~~~~~~~-~~~il~~~~-~~~l~~yd~~~~~ 328 (335)
.....+..|+++.- .+.||+... .+.|...|..+++
T Consensus 597 ~~~~~l~~P~glav~~~~lYwtD~~~~~I~~~dk~tG~ 634 (791)
T 3m0c_C 597 EDEKRLAHPFSLAVFEDKVFWTDIINEAIFSANRLTGS 634 (791)
T ss_dssp ECTTTTSSEEEEEEETTEEEEEETTTTEEEEEETTTCC
T ss_pred cCCCccCCCCEEEEeCCEEEEEECCCCEEEEEeCCCCc
Confidence 11123456777654 445665543 5679999976653
No 162
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=48.31 E-value=1.3e+02 Score=25.76 Aligned_cols=64 Identities=8% Similarity=-0.012 Sum_probs=39.1
Q ss_pred CCeEEEEEecCCCCEEEEEEECCCCceeEEEEeccCCceeeeEEEeeCC-EEEEE-ecCCeEEEEeCCCCc
Q 045559 260 NDSLSFLVFDERESCFDIWTMKERYHWTKEFSTTPILAVDAPIGFWKND-TFFIR-SNTEELLLYDPNSEE 328 (335)
Q Consensus 260 ~g~L~~~~~~~~~~~~~IW~l~~~~~W~~~~~i~~~~~~~~~~~~~~~~-~il~~-~~~~~l~~yd~~~~~ 328 (335)
+|.+.+.... ...+.||-++. . ....++........-+.+.+++ .+++. ..++.+..||+++.+
T Consensus 274 ~~~~l~s~~~--dg~v~~wd~~~-~--~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~d~~i~iw~~~~~~ 339 (416)
T 2pm9_A 274 DEHLLLSSGR--DNTVLLWNPES-A--EQLSQFPARGNWCFKTKFAPEAPDLFACASFDNKIEVQTLQNLT 339 (416)
T ss_dssp CSSCEEEEES--SSEEEEECSSS-C--CEEEEEECSSSCCCCEEECTTCTTEEEECCSSSEEEEEESCCCC
T ss_pred CCCeEEEEeC--CCCEEEeeCCC-C--ccceeecCCCCceEEEEECCCCCCEEEEEecCCcEEEEEccCCC
Confidence 5665555554 57899998776 3 3344442223334445666676 55554 457789999988765
No 163
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=45.87 E-value=1.4e+02 Score=25.39 Aligned_cols=55 Identities=9% Similarity=0.148 Sum_probs=33.6
Q ss_pred CCEEEEEEECCCCceeEEEEecc---C---CceeeeEEEeeCCEEEEE-ecC---CeEEEEeCCCCce
Q 045559 272 ESCFDIWTMKERYHWTKEFSTTP---I---LAVDAPIGFWKNDTFFIR-SNT---EELLLYDPNSEEI 329 (335)
Q Consensus 272 ~~~~~IW~l~~~~~W~~~~~i~~---~---~~~~~~~~~~~~~~il~~-~~~---~~l~~yd~~~~~~ 329 (335)
...+.||-+.. .. ....+.. . ..-..-+.+.+++++++. ..+ +.+..||+++++.
T Consensus 206 dg~i~i~d~~~-~~--~~~~~~~~~~h~~~~~~i~~i~~~~~~~~l~~~~~d~~~g~i~i~d~~~~~~ 270 (397)
T 1sq9_A 206 NGTVQISELST-LR--PLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGER 270 (397)
T ss_dssp TSEEEEEETTT-TE--EEEEEECCC---CCCCCEEEEEECSSTTEEEEEEEETTEEEEEEEETTTCCE
T ss_pred CCcEEEEECCC-Cc--eeEEEeccccccccCCccceEEECCCCCEEEEEecCCCCceEEEEECCCCcc
Confidence 67899999886 32 3334421 1 333444555667776554 445 6899999987654
No 164
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=45.23 E-value=1.6e+02 Score=25.81 Aligned_cols=181 Identities=8% Similarity=0.039 Sum_probs=85.6
Q ss_pred ceEEEeecCceEEEEecchhhhhcCCCCcccCCcCCceeeeeEEeecCCCCCeEEEEEEEEecCccccccCCCceEEEEE
Q 045559 98 GLFIMFIGGDEIALYNHATRDLKFLPKLTLIDNLESIYTIMFGLGLDPKCNYYKLVYIVTYHDSELGKVLNDSRQVFIYS 177 (335)
Q Consensus 98 GLl~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~l~~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~~~vys 177 (335)
.++........+.|||..|++...--.... .....+.+++ . .++... ..-.+.+++
T Consensus 184 ~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~--------~~v~~l~~~~---~-~l~s~s------------~dg~i~vwd 239 (435)
T 1p22_A 184 RVIITGSSDSTVRVWDVNTGEMLNTLIHHC--------EAVLHLRFNN---G-MMVTCS------------KDRSIAVWD 239 (435)
T ss_dssp SEEEEEETTSCEEEEESSSCCEEEEECCCC--------SCEEEEECCT---T-EEEEEE------------TTSCEEEEE
T ss_pred CEEEEEcCCCeEEEEECCCCcEEEEEcCCC--------CcEEEEEEcC---C-EEEEee------------CCCcEEEEe
Confidence 344444456788899988876432211111 1134444443 2 222221 133578888
Q ss_pred cCCCcceecCcccccccccCCCceeeeecceEEEEeecCCCCCccCceEEEEEECCccceeee-cCCCccccCCCCeeEE
Q 045559 178 FSDNSWRNFQGFEFGMYDLDEVLDCTYHNGACHWLVPFGAFHPLCCHYVILSFDMSDEVFEEI-LGPNCLLEISPKHTVF 256 (335)
Q Consensus 178 s~~~~W~~~~~~p~~~~~~~~~~~~v~~~G~~ywl~~~~~~~~~~~~~~i~~fD~~~e~~~~i-~~P~~~~~~~~~~~~l 256 (335)
.+++.-...... ...+...-.++..+|.....+.. ...|..+|+.+.+.... .... ....-
T Consensus 240 ~~~~~~~~~~~~---~~~~~~~v~~~~~~~~~l~s~~~--------dg~i~vwd~~~~~~~~~~~~~~-------~~v~~ 301 (435)
T 1p22_A 240 MASPTDITLRRV---LVGHRAAVNVVDFDDKYIVSASG--------DRTIKVWNTSTCEFVRTLNGHK-------RGIAC 301 (435)
T ss_dssp CSSSSCCEEEEE---ECCCSSCEEEEEEETTEEEEEET--------TSEEEEEETTTCCEEEEEECCS-------SCEEE
T ss_pred CCCCCCceeeeE---ecCCCCcEEEEEeCCCEEEEEeC--------CCeEEEEECCcCcEEEEEcCCC-------CcEEE
Confidence 776532110000 00000001244446654444433 33688899887654322 2111 11222
Q ss_pred EEeCCeEEEEEecCCCCEEEEEEECCCCceeEEEEeccCCceeeeEEEeeCCEE-EEEecCCeEEEEeCCCC
Q 045559 257 GLYNDSLSFLVFDERESCFDIWTMKERYHWTKEFSTTPILAVDAPIGFWKNDTF-FIRSNTEELLLYDPNSE 327 (335)
Q Consensus 257 ~~~~g~L~~~~~~~~~~~~~IW~l~~~~~W~~~~~i~~~~~~~~~~~~~~~~~i-l~~~~~~~l~~yd~~~~ 327 (335)
...+|.+.+.+.. .+.+.||-++. . ....++........ ++.-+++. +....++.+..||++++
T Consensus 302 ~~~~~~~l~~g~~--dg~i~iwd~~~-~--~~~~~~~~h~~~v~--~~~~~~~~l~sg~~dg~i~vwd~~~~ 366 (435)
T 1p22_A 302 LQYRDRLVVSGSS--DNTIRLWDIEC-G--ACLRVLEGHEELVR--CIRFDNKRIVSGAYDGKIKVWDLVAA 366 (435)
T ss_dssp EEEETTEEEEEET--TSCEEEEETTT-C--CEEEEECCCSSCEE--EEECCSSEEEEEETTSCEEEEEHHHH
T ss_pred EEeCCCEEEEEeC--CCeEEEEECCC-C--CEEEEEeCCcCcEE--EEEecCCEEEEEeCCCcEEEEECCCC
Confidence 2335565555554 57899998876 2 23344421222222 22225554 44555778999987654
No 165
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=45.14 E-value=1.2e+02 Score=25.16 Aligned_cols=65 Identities=5% Similarity=-0.033 Sum_probs=39.3
Q ss_pred CCeEEEEEecCCCCEEEEEEECCCCceeEEEEeccCCc--eeeeEEEeeCCE-EEEEe-cCCeEEEEeCCCCcee
Q 045559 260 NDSLSFLVFDERESCFDIWTMKERYHWTKEFSTTPILA--VDAPIGFWKNDT-FFIRS-NTEELLLYDPNSEEII 330 (335)
Q Consensus 260 ~g~L~~~~~~~~~~~~~IW~l~~~~~W~~~~~i~~~~~--~~~~~~~~~~~~-il~~~-~~~~l~~yd~~~~~~~ 330 (335)
++.+++.... ...+.+|-++. ..-.+ ++ +... ...-+.+.++|+ +++.. .+..+..||+++++..
T Consensus 10 ~~~~~v~~~~--~~~v~~~d~~~-~~~~~--~~-~~~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~ 78 (349)
T 1jmx_B 10 GHEYMIVTNY--PNNLHVVDVAS-DTVYK--SC-VMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNT 78 (349)
T ss_dssp TCEEEEEEET--TTEEEEEETTT-TEEEE--EE-ECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEE
T ss_pred CCEEEEEeCC--CCeEEEEECCC-CcEEE--EE-ecCCCCCCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcEE
Confidence 4556666655 56777777665 44333 34 2332 233455667776 45444 4678999999987754
No 166
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=44.69 E-value=1.5e+02 Score=25.32 Aligned_cols=59 Identities=10% Similarity=0.227 Sum_probs=37.5
Q ss_pred CCEEEEEEECC-CCceeEEEEeccCCceeeeEEEeeCCEEEEE-ecCCeEEEEeCCCCcee
Q 045559 272 ESCFDIWTMKE-RYHWTKEFSTTPILAVDAPIGFWKNDTFFIR-SNTEELLLYDPNSEEII 330 (335)
Q Consensus 272 ~~~~~IW~l~~-~~~W~~~~~i~~~~~~~~~~~~~~~~~il~~-~~~~~l~~yd~~~~~~~ 330 (335)
.+.+.||-++. ..................-+++.++|+.++. ..++.+..+|+++++..
T Consensus 102 dg~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d~~i~iwd~~~~~~~ 162 (344)
T 4gqb_B 102 SGAVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKDICIKVWDLAQQVVL 162 (344)
T ss_dssp TSEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEE
T ss_pred CCEEEEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEE
Confidence 57899999987 2333333322123333555666778886654 45778999999987654
No 167
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=44.05 E-value=1.4e+02 Score=25.01 Aligned_cols=199 Identities=9% Similarity=0.012 Sum_probs=89.7
Q ss_pred ccccccceEEEeecCceEEEEecchhhhh-cCCCCcccCCcCCceeeeeEEeecCCC-CCeEEEEEEEEecCccccccCC
Q 045559 92 FRGPFEGLFIMFIGGDEIALYNHATRDLK-FLPKLTLIDNLESIYTIMFGLGLDPKC-NYYKLVYIVTYHDSELGKVLND 169 (335)
Q Consensus 92 ~~~s~~GLl~~~~~~~~~~V~NP~T~~~~-~LP~~~~~~~~~~~~~~~~~l~~d~~~-~~ykVv~~~~~~~~~~~~~~~~ 169 (335)
+.++.+|-+.+........++|..|++.. .+.... . .....+.++|.. +.+-+ ... .
T Consensus 89 ~s~s~D~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~-~-------~~v~~~~~~~~~~~~~l~-s~s------------~ 147 (343)
T 3lrv_A 89 ISRGPCNRLLLLYPGNQITILDSKTNKVLREIEVDS-A-------NEIIYMYGHNEVNTEYFI-WAD------------N 147 (343)
T ss_dssp EEECSTTEEEEEETTTEEEEEETTTCCEEEEEECCC-S-------SCEEEEECCC---CCEEE-EEE------------T
T ss_pred EEecCCCeEEEEEccCceEEeecCCcceeEEeecCC-C-------CCEEEEEcCCCCCCCEEE-EEe------------C
Confidence 44556666666665566667777776622 211110 0 114566666622 23322 221 1
Q ss_pred CceEEEEEcCCCcceecCcccccccccCCCceeeeecceEEEEeecCCCCCccCceEEEEEECCccceeeecCCCccccC
Q 045559 170 SRQVFIYSFSDNSWRNFQGFEFGMYDLDEVLDCTYHNGACHWLVPFGAFHPLCCHYVILSFDMSDEVFEEILGPNCLLEI 249 (335)
Q Consensus 170 ~~~~~vyss~~~~W~~~~~~p~~~~~~~~~~~~v~~~G~~ywl~~~~~~~~~~~~~~i~~fD~~~e~~~~i~~P~~~~~~ 249 (335)
.-.+.+|+.+++.-........... .. .....-+|.+...+.. ...|-.+|+.+..-....+......
T Consensus 148 dg~i~~wd~~~~~~~~~~~~~~~~~-i~--~~~~~pdg~~lasg~~--------dg~i~iwd~~~~~~~~~~~~~~h~~- 215 (343)
T 3lrv_A 148 RGTIGFQSYEDDSQYIVHSAKSDVE-YS--SGVLHKDSLLLALYSP--------DGILDVYNLSSPDQASSRFPVDEEA- 215 (343)
T ss_dssp TCCEEEEESSSSCEEEEECCCSSCC-CC--EEEECTTSCEEEEECT--------TSCEEEEESSCTTSCCEECCCCTTS-
T ss_pred CCcEEEEECCCCcEEEEEecCCCCc-eE--EEEECCCCCEEEEEcC--------CCEEEEEECCCCCCCccEEeccCCC-
Confidence 2357888887664322110111000 00 0112224544333332 2368888988765441222210000
Q ss_pred CCCeeEEEEe-CCeEEEEEecCCCCEEEEEEECC-CCceeEE----EEeccCCceeeeEEEeeCCEEEEE-ec-CCeEEE
Q 045559 250 SPKHTVFGLY-NDSLSFLVFDERESCFDIWTMKE-RYHWTKE----FSTTPILAVDAPIGFWKNDTFFIR-SN-TEELLL 321 (335)
Q Consensus 250 ~~~~~~l~~~-~g~L~~~~~~~~~~~~~IW~l~~-~~~W~~~----~~i~~~~~~~~~~~~~~~~~il~~-~~-~~~l~~ 321 (335)
.-..+.-. +|...+...+ . .+.||-+.. ....... +.. +... .-+++.++|+.++. .. ++.+..
T Consensus 216 --~v~~l~fs~~g~~l~s~~~--~-~v~iwd~~~~~~~~~~~~~~~~~~-~~~~--~~~~~~~~g~~l~~~s~~d~~i~v 287 (343)
T 3lrv_A 216 --KIKEVKFADNGYWMVVECD--Q-TVVCFDLRKDVGTLAYPTYTIPEF-KTGT--VTYDIDDSGKNMIAYSNESNSLTI 287 (343)
T ss_dssp --CEEEEEECTTSSEEEEEES--S-BEEEEETTSSTTCBSSCCCBC------CC--EEEEECTTSSEEEEEETTTTEEEE
T ss_pred --CEEEEEEeCCCCEEEEEeC--C-eEEEEEcCCCCcceeecccccccc-cccc--eEEEECCCCCEEEEecCCCCcEEE
Confidence 12233333 4554444443 3 899999887 1111100 011 1111 23666678887665 23 666777
Q ss_pred EeC--CCCceee
Q 045559 322 YDP--NSEEIID 331 (335)
Q Consensus 322 yd~--~~~~~~~ 331 (335)
||. .++.|+.
T Consensus 288 ~~~~~~~~~~~~ 299 (343)
T 3lrv_A 288 YKFDKKTKNWTK 299 (343)
T ss_dssp EEECTTTCSEEE
T ss_pred EEEcccccceEe
Confidence 766 5556664
No 168
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=43.39 E-value=1.9e+02 Score=26.22 Aligned_cols=94 Identities=9% Similarity=0.117 Sum_probs=50.0
Q ss_pred EEEEEECCccceeeecCCCccccCCCCeeEEEEe-CCeEEEEEecCCCCEEEEEEECCCCceeEEEEeccCCceeeeEEE
Q 045559 226 VILSFDMSDEVFEEILGPNCLLEISPKHTVFGLY-NDSLSFLVFDERESCFDIWTMKERYHWTKEFSTTPILAVDAPIGF 304 (335)
Q Consensus 226 ~i~~fD~~~e~~~~i~~P~~~~~~~~~~~~l~~~-~g~L~~~~~~~~~~~~~IW~l~~~~~W~~~~~i~~~~~~~~~~~~ 304 (335)
.|-.+|...+....+..+.. .-..++.. +|+..+.... ...+.+|-.+. ....++.....-..-+.+
T Consensus 326 ~i~~w~~~~~~~~~~~~~~~------~v~~~~~s~~g~~l~~~~~--dg~v~~~~~~~----~~~~~~~~~~~~v~~~~~ 393 (577)
T 2ymu_A 326 TVKLWNRNGQHLQTLTGHSS------SVWGVAFSPDGQTIASASD--DKTVKLWNRNG----QLLQTLTGHSSSVRGVAF 393 (577)
T ss_dssp CEEEEETTSCEEEEECCCSS------CEEEEEECTTSSEEEEEET--TSEEEEEETTC----CEEEEEECCSSCEEEEEE
T ss_pred eEEEEeCCCCeeEEEeCCCC------CEEEEEECCCCCEEEEEeC--CCEEEEEcCCC----CEEEEecCCCCCeEEEEE
Confidence 45667776665555432221 11223333 5554444443 56788997554 233344223333444566
Q ss_pred eeCCEEEE-EecCCeEEEEeCCCCceee
Q 045559 305 WKNDTFFI-RSNTEELLLYDPNSEEIID 331 (335)
Q Consensus 305 ~~~~~il~-~~~~~~l~~yd~~~~~~~~ 331 (335)
.++|+.++ ...++.+..||...+..+.
T Consensus 394 s~dg~~l~~~~~d~~v~~~~~~~~~~~~ 421 (577)
T 2ymu_A 394 SPDGQTIASASDDKTVKLWNRNGQLLQT 421 (577)
T ss_dssp CTTSSCEEEEETTSEEEEECTTCCEEEE
T ss_pred CCCCCEEEEEeCCCEEEEEeCCCCEEEE
Confidence 67777544 4556778888876655443
No 169
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=42.95 E-value=2e+02 Score=26.25 Aligned_cols=64 Identities=8% Similarity=-0.070 Sum_probs=37.7
Q ss_pred CCeEEEEEecCCCCEEEEEEECCCCceeEEEEeccCCceeeeEEEeeCCEEEEEecCCeEEEEeCCCC
Q 045559 260 NDSLSFLVFDERESCFDIWTMKERYHWTKEFSTTPILAVDAPIGFWKNDTFFIRSNTEELLLYDPNSE 327 (335)
Q Consensus 260 ~g~L~~~~~~~~~~~~~IW~l~~~~~W~~~~~i~~~~~~~~~~~~~~~~~il~~~~~~~l~~yd~~~~ 327 (335)
+|++.+.... ...+.||-++... .....+........-+.+.+++.++....++.+..||++++
T Consensus 552 ~~~~l~~~~~--dg~i~iw~~~~~~--~~~~~~~~h~~~v~~l~~s~~~~l~s~~~d~~v~iw~~~~~ 615 (615)
T 1pgu_A 552 EEDLVATGSL--DTNIFIYSVKRPM--KIIKALNAHKDGVNNLLWETPSTLVSSGADACIKRWNVVLE 615 (615)
T ss_dssp SCCEEEEEET--TSCEEEEESSCTT--CCEEETTSSTTCEEEEEEEETTEEEEEETTSCEEEEEEC--
T ss_pred CCCEEEEEcC--CCcEEEEECCCCc--eechhhhcCccceEEEEEcCCCCeEEecCCceEEEEeeecC
Confidence 5665555544 4689999998721 22233322333344566678888334455778999998763
No 170
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=42.59 E-value=1.4e+02 Score=24.54 Aligned_cols=141 Identities=11% Similarity=-0.004 Sum_probs=71.2
Q ss_pred CceEEEEEcCCCc--ceecCcccccccccCCCceeeeecceEEEEeecCCCCCccCceEEEEEECCccceeeecCCCccc
Q 045559 170 SRQVFIYSFSDNS--WRNFQGFEFGMYDLDEVLDCTYHNGACHWLVPFGAFHPLCCHYVILSFDMSDEVFEEILGPNCLL 247 (335)
Q Consensus 170 ~~~~~vyss~~~~--W~~~~~~p~~~~~~~~~~~~v~~~G~~ywl~~~~~~~~~~~~~~i~~fD~~~e~~~~i~~P~~~~ 247 (335)
.-.+.+++.++++ |+.-..-... .. ...+.-||.++. +. ...|..||.+.+.-..+..|....
T Consensus 14 ~~~v~~~d~~tG~~~w~~~~~~~~~-~~----~~~~~pdG~ilv-s~---------~~~V~~~d~~G~~~W~~~~~~~~~ 78 (276)
T 3no2_A 14 WNKIAIINKDTKEIVWEYPLEKGWE-CN----SVAATKAGEILF-SY---------SKGAKMITRDGRELWNIAAPAGCE 78 (276)
T ss_dssp CSEEEEEETTTTEEEEEEECCTTCC-CC----EEEECTTSCEEE-EC---------BSEEEEECTTSCEEEEEECCTTCE
T ss_pred CCEEEEEECCCCeEEEEeCCCccCC-Cc----CeEECCCCCEEE-eC---------CCCEEEECCCCCEEEEEcCCCCcc
Confidence 4567788876664 7654211000 01 123445787666 32 236999998544334445442111
Q ss_pred cCCCCeeEEEEeCCeEEEEEecCCCCEEEEEEECCCCceeEEEEecc-C-Cc--eeeeEEEeeCCEEEEEe-cCCeEEEE
Q 045559 248 EISPKHTVFGLYNDSLSFLVFDERESCFDIWTMKERYHWTKEFSTTP-I-LA--VDAPIGFWKNDTFFIRS-NTEELLLY 322 (335)
Q Consensus 248 ~~~~~~~~l~~~~g~L~~~~~~~~~~~~~IW~l~~~~~W~~~~~i~~-~-~~--~~~~~~~~~~~~il~~~-~~~~l~~y 322 (335)
....-..-+|.+.+..... .-.|+.++...+......+.. . .. ...-+.+..+|++++.. .+.+|..|
T Consensus 79 ----~~~~~~~~dG~~lv~~~~~---~~~v~~vd~~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~~~~~v~~~ 151 (276)
T 3no2_A 79 ----MQTARILPDGNALVAWCGH---PSTILEVNMKGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFATSEVREI 151 (276)
T ss_dssp ----EEEEEECTTSCEEEEEEST---TEEEEEECTTSCEEEEEEECCSCSSGGGSCSCCEECTTSCEEEEETTTTEEEEE
T ss_pred ----ccccEECCCCCEEEEecCC---CCEEEEEeCCCCEEEEEeccCCCCcccccccCceECCCCCEEEEecCCCEEEEE
Confidence 1112233467766665431 235666665333333333311 1 01 12223445678876654 46789999
Q ss_pred eCCCCceeec
Q 045559 323 DPNSEEIIDF 332 (335)
Q Consensus 323 d~~~~~~~~v 332 (335)
|++.+..-++
T Consensus 152 d~~G~~~w~~ 161 (276)
T 3no2_A 152 APNGQLLNSV 161 (276)
T ss_dssp CTTSCEEEEE
T ss_pred CCCCCEEEEE
Confidence 9986655444
No 171
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=42.43 E-value=1.1e+02 Score=25.70 Aligned_cols=58 Identities=7% Similarity=0.103 Sum_probs=34.5
Q ss_pred CCEEEEEEECC-CCceeEEEEeccCCceeeeEEEeeCCEEEEE-ecCCeEEEEeCCCCce
Q 045559 272 ESCFDIWTMKE-RYHWTKEFSTTPILAVDAPIGFWKNDTFFIR-SNTEELLLYDPNSEEI 329 (335)
Q Consensus 272 ~~~~~IW~l~~-~~~W~~~~~i~~~~~~~~~~~~~~~~~il~~-~~~~~l~~yd~~~~~~ 329 (335)
...+.||-++. ...+.....+.....-..-+.+.+++.+++. ..++.+..||..++.+
T Consensus 128 D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~iW~~~~~~~ 187 (330)
T 2hes_X 128 DKSVWIWETDESGEEYECISVLQEHSQDVKHVIWHPSEALLASSSYDDTVRIWKDYDDDW 187 (330)
T ss_dssp TSCEEEEECCTTCCCCEEEEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEEEETTEE
T ss_pred CCEEEEEeccCCCCCeEEEEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCCe
Confidence 46789999865 3456555555323333344455566765554 4466788888766544
No 172
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=41.34 E-value=1.5e+02 Score=24.56 Aligned_cols=193 Identities=8% Similarity=-0.062 Sum_probs=90.1
Q ss_pred ccceEEEee-cCceEEEEecchhhhhcCCCCcccCCcCCceeeeeEEeecCCCCCeEEEEEEEEecCccccccCCCceEE
Q 045559 96 FEGLFIMFI-GGDEIALYNHATRDLKFLPKLTLIDNLESIYTIMFGLGLDPKCNYYKLVYIVTYHDSELGKVLNDSRQVF 174 (335)
Q Consensus 96 ~~GLl~~~~-~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~l~~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~~~ 174 (335)
.+|-|.+.. ....++++||.++....++... ...++.+++.. ...| ... . .....+.
T Consensus 41 ~~g~lyv~d~~~~~I~~~d~~g~~~~~~~~~~----------~p~gia~~~dG-~l~v--ad~--~-------~~~~~v~ 98 (306)
T 2p4o_A 41 PDGTIFVTNHEVGEIVSITPDGNQQIHATVEG----------KVSGLAFTSNG-DLVA--TGW--N-------ADSIPVV 98 (306)
T ss_dssp TTSCEEEEETTTTEEEEECTTCCEEEEEECSS----------EEEEEEECTTS-CEEE--EEE--C-------TTSCEEE
T ss_pred CCCCEEEEeCCCCeEEEECCCCceEEEEeCCC----------CceeEEEcCCC-cEEE--Eec--c-------CCcceEE
Confidence 366665555 4667888998875433322211 13567777654 3322 111 1 1123456
Q ss_pred EEEcCCCcceecCccccc-ccccCCCceeeeecceEEEEeecCCCCCccCceEEEEEECCccceeee--c------CCCc
Q 045559 175 IYSFSDNSWRNFQGFEFG-MYDLDEVLDCTYHNGACHWLVPFGAFHPLCCHYVILSFDMSDEVFEEI--L------GPNC 245 (335)
Q Consensus 175 vyss~~~~W~~~~~~p~~-~~~~~~~~~~v~~~G~~ywl~~~~~~~~~~~~~~i~~fD~~~e~~~~i--~------~P~~ 245 (335)
.|+..++..+.+...+.. .... ..+..+|.+|.... . ...|..+|..+...... . .+..
T Consensus 99 ~~d~~~g~~~~~~~~~~~~~~~g----~~~~~~~~~~v~d~-~-------~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~ 166 (306)
T 2p4o_A 99 SLVKSDGTVETLLTLPDAIFLNG----ITPLSDTQYLTADS-Y-------RGAIWLIDVVQPSGSIWLEHPMLARSNSES 166 (306)
T ss_dssp EEECTTSCEEEEEECTTCSCEEE----EEESSSSEEEEEET-T-------TTEEEEEETTTTEEEEEEECGGGSCSSTTC
T ss_pred EEcCCCCeEEEEEeCCCccccCc----ccccCCCcEEEEEC-C-------CCeEEEEeCCCCcEeEEEECCccccccccC
Confidence 667677766544322211 1111 11223444555332 2 34788889875321111 0 1110
Q ss_pred cccCCCCeeEEEEeCCeEEEEEecCCCCEEEEEEECCCCceeEEEEeccCCceeeeEEEeeCCEEEEEec-CCeEEEEeC
Q 045559 246 LLEISPKHTVFGLYNDSLSFLVFDERESCFDIWTMKERYHWTKEFSTTPILAVDAPIGFWKNDTFFIRSN-TEELLLYDP 324 (335)
Q Consensus 246 ~~~~~~~~~~l~~~~g~L~~~~~~~~~~~~~IW~l~~~~~W~~~~~i~~~~~~~~~~~~~~~~~il~~~~-~~~l~~yd~ 324 (335)
.. .....+..-++.|++.... .+.+.++-++..........+... ....-+++..+|.+++... .++|..||+
T Consensus 167 -~~--~~pngis~dg~~lyv~d~~--~~~I~~~~~~~~g~~~~~~~~~~~-~~P~gi~vd~dG~l~va~~~~~~V~~~~~ 240 (306)
T 2p4o_A 167 -VF--PAANGLKRFGNFLYVSNTE--KMLLLRIPVDSTDKPGEPEIFVEQ-TNIDDFAFDVEGNLYGATHIYNSVVRIAP 240 (306)
T ss_dssp -CS--CSEEEEEEETTEEEEEETT--TTEEEEEEBCTTSCBCCCEEEEES-CCCSSEEEBTTCCEEEECBTTCCEEEECT
T ss_pred -CC--CcCCCcCcCCCEEEEEeCC--CCEEEEEEeCCCCCCCccEEEecc-CCCCCeEECCCCCEEEEeCCCCeEEEECC
Confidence 00 0122243333458877765 566666665531111111111001 1123355566788877654 568999999
Q ss_pred CCCc
Q 045559 325 NSEE 328 (335)
Q Consensus 325 ~~~~ 328 (335)
+.+.
T Consensus 241 ~G~~ 244 (306)
T 2p4o_A 241 DRST 244 (306)
T ss_dssp TCCE
T ss_pred CCCE
Confidence 7443
No 173
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=41.29 E-value=1.5e+02 Score=24.43 Aligned_cols=21 Identities=10% Similarity=-0.009 Sum_probs=13.1
Q ss_pred cccceEEEeecCceEEEEecchhh
Q 045559 95 PFEGLFIMFIGGDEIALYNHATRD 118 (335)
Q Consensus 95 s~~GLl~~~~~~~~~~V~NP~T~~ 118 (335)
..+|.|.+.. .. ++.+|+ +++
T Consensus 68 ~~~g~l~v~t-~~-l~~~d~-~g~ 88 (330)
T 3hxj_A 68 GKDGTIYFGS-DK-VYAINP-DGT 88 (330)
T ss_dssp TTTTEECCSS-CE-EEEECC-CGG
T ss_pred ecCCcEEEec-Cc-EEEECC-CCc
Confidence 3467666655 33 888898 444
No 174
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=41.25 E-value=2.5e+02 Score=27.09 Aligned_cols=102 Identities=7% Similarity=-0.037 Sum_probs=52.2
Q ss_pred EEEEEECCccceeeecCCCcc-c--cCCCCeeEEEE-eCCe-EEEEEecCCCCEEEEEEECCCCceeEEEEecc-CC-ce
Q 045559 226 VILSFDMSDEVFEEILGPNCL-L--EISPKHTVFGL-YNDS-LSFLVFDERESCFDIWTMKERYHWTKEFSTTP-IL-AV 298 (335)
Q Consensus 226 ~i~~fD~~~e~~~~i~~P~~~-~--~~~~~~~~l~~-~~g~-L~~~~~~~~~~~~~IW~l~~~~~W~~~~~i~~-~~-~~ 298 (335)
.|..+|..+..+..+..+... . .....-..+.+ .+|. |.+-... ..+.++-.+. ..+.......+ +. ..
T Consensus 378 Gl~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~~lWigt~~---~Gl~~~d~~~-~~~~~~~~~~~~l~~~~ 453 (795)
T 4a2l_A 378 GLNLYNPITQRFTSYTLQEDESARGIGSNNIKAVYVDEKKSLVYIGTHA---GGLSILHRNS-GQVENFNQRNSQLVNEN 453 (795)
T ss_dssp CEEEECTTTCCEEEECCC------CCSCSCEEEEEEETTTTEEEEEETT---TEEEEEETTT-CCEEEECTTTSCCSCSC
T ss_pred CeEEEcCCCCcEEEEecCCCCcccCCCCccEEEEEEcCCCCEEEEEeCc---CceeEEeCCC-CcEEEeecCCCCcCCCe
Confidence 589999999988877543210 0 00012223444 3666 6665432 3343333332 33322111000 11 11
Q ss_pred eeeEEEeeCCEEEEEecCCeEEEEeCCCCceeec
Q 045559 299 DAPIGFWKNDTFFIRSNTEELLLYDPNSEEIIDF 332 (335)
Q Consensus 299 ~~~~~~~~~~~il~~~~~~~l~~yd~~~~~~~~v 332 (335)
..-+....+|.+.+... ..|+.||+++++++.+
T Consensus 454 v~~i~~d~~g~lwigt~-~Gl~~~~~~~~~~~~~ 486 (795)
T 4a2l_A 454 VYAILPDGEGNLWLGTL-SALVRFNPEQRSFTTI 486 (795)
T ss_dssp EEEEEECSSSCEEEEES-SCEEEEETTTTEEEEC
T ss_pred eEEEEECCCCCEEEEec-CceeEEeCCCCeEEEc
Confidence 22233344677888776 5699999999988765
No 175
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=41.09 E-value=1.5e+02 Score=24.27 Aligned_cols=66 Identities=14% Similarity=0.131 Sum_probs=42.8
Q ss_pred CeEEEEEecCCCCEEEEEEECC------CCceeEEEEeccCCceeeeEEEeeC--CEEE-EEecCCeEEEEeCCCCc
Q 045559 261 DSLSFLVFDERESCFDIWTMKE------RYHWTKEFSTTPILAVDAPIGFWKN--DTFF-IRSNTEELLLYDPNSEE 328 (335)
Q Consensus 261 g~L~~~~~~~~~~~~~IW~l~~------~~~W~~~~~i~~~~~~~~~~~~~~~--~~il-~~~~~~~l~~yd~~~~~ 328 (335)
|.+.+.... ...+.||-++. ...|.....+........-+.+.++ ++++ ....++.+..||+++++
T Consensus 71 ~~~l~s~~~--dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~ 145 (351)
T 3f3f_A 71 GRIIASASY--DKTVKLWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPS 145 (351)
T ss_dssp CSEEEEEET--TSCEEEEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTT
T ss_pred CCEEEEEcC--CCeEEEEecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChH
Confidence 665555554 47899999987 2456666666333333444555666 6654 45567889999988765
No 176
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=40.90 E-value=1.5e+02 Score=24.37 Aligned_cols=64 Identities=13% Similarity=0.147 Sum_probs=40.2
Q ss_pred CCeEEEEEecCCCCEEEEEEECCCCceeEEEEeccCCceeeeEEEeeCCEEEEEecCCeEEEEeCCCCce
Q 045559 260 NDSLSFLVFDERESCFDIWTMKERYHWTKEFSTTPILAVDAPIGFWKNDTFFIRSNTEELLLYDPNSEEI 329 (335)
Q Consensus 260 ~g~L~~~~~~~~~~~~~IW~l~~~~~W~~~~~i~~~~~~~~~~~~~~~~~il~~~~~~~l~~yd~~~~~~ 329 (335)
+|++.+.+.. ...+.||-+.. +.....+ ........+.+.+++.++....++.+..||++++..
T Consensus 226 ~~~~l~s~s~--Dg~i~iwd~~~---~~~~~~~-~~~~~v~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~ 289 (340)
T 4aow_A 226 DGSLCASGGK--DGQAMLWDLNE---GKHLYTL-DGGDIINALCFSPNRYWLCAATGPSIKIWDLEGKII 289 (340)
T ss_dssp TSSEEEEEET--TCEEEEEETTT---TEEEEEE-ECSSCEEEEEECSSSSEEEEEETTEEEEEETTTTEE
T ss_pred CCCEEEEEeC--CCeEEEEEecc---Cceeeee-cCCceEEeeecCCCCceeeccCCCEEEEEECCCCeE
Confidence 5665555554 57899998776 2344445 333334445555666677766777888888887654
No 177
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=39.76 E-value=1.7e+02 Score=24.66 Aligned_cols=68 Identities=6% Similarity=-0.119 Sum_probs=37.8
Q ss_pred CCeEEEEEecCCCCEEEEEEECC-CCceeEEEEeccCCceeeeEEEeeCCEEEEEecCCeEEEEeCCCCce
Q 045559 260 NDSLSFLVFDERESCFDIWTMKE-RYHWTKEFSTTPILAVDAPIGFWKNDTFFIRSNTEELLLYDPNSEEI 329 (335)
Q Consensus 260 ~g~L~~~~~~~~~~~~~IW~l~~-~~~W~~~~~i~~~~~~~~~~~~~~~~~il~~~~~~~l~~yd~~~~~~ 329 (335)
+|++.+.... ...+.||-++. ........++........-+.+.++|++++...+..+..|+...+.+
T Consensus 216 ~~~~l~~~~~--d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~~~~~~~~~~ 284 (377)
T 3dwl_C 216 SGNALAYAGH--DSSVTIAYPSAPEQPPRALITVKLSQLPLRSLLWANESAIVAAGYNYSPILLQGNESGW 284 (377)
T ss_dssp TSSCEEEEET--TTEEC-CEECSTTSCEEECCCEECSSSCEEEEEEEETTEEEEEESSSSEEEECCCC---
T ss_pred CCCEEEEEeC--CCcEEEEECCCCCCcceeeEeecCCCCceEEEEEcCCCCEEEEEcCCcEEEEEeCCCce
Confidence 5554444433 57899999987 22222233332222234456667789988777766777888875543
No 178
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=39.60 E-value=2.5e+02 Score=26.47 Aligned_cols=113 Identities=12% Similarity=0.081 Sum_probs=55.9
Q ss_pred eeeeecceEEEEee-cCCCCCccCceEEEEEEC-Ccc--ceeee-cCCCccc---cCCCCeeEEEE--eCCe----EEEE
Q 045559 201 DCTYHNGACHWLVP-FGAFHPLCCHYVILSFDM-SDE--VFEEI-LGPNCLL---EISPKHTVFGL--YNDS----LSFL 266 (335)
Q Consensus 201 ~~v~~~G~~ywl~~-~~~~~~~~~~~~i~~fD~-~~e--~~~~i-~~P~~~~---~~~~~~~~l~~--~~g~----L~~~ 266 (335)
.+++.+|.+|.... .+ .+.++|. ++. .|+.- ..+.... ..+.....++. .+|. |++.
T Consensus 57 tP~v~~g~vyv~~~~~~---------~v~AlD~~~tG~~lW~~~~~~~~~~~~~~~~~~~~~g~av~p~~g~~~~rV~v~ 127 (599)
T 1w6s_A 57 APLVVDGKMYIHTSFPN---------NTFALGLDDPGTILWQDKPKQNPAARAVACCDLVNRGLAYWPGDGKTPALILKT 127 (599)
T ss_dssp CCEEETTEEEEECSTTT---------CEEEEETTCTTSEEEEECCCCCGGGGGGCSSCSCCCCCEEECCCSSSCCEEEEE
T ss_pred ccEEECCEEEEEeCCCC---------EEEEEeCCCCCcEEEEECCCCCccccccccccccccceEEEecCCcceeEEEEE
Confidence 37888999998775 33 5999998 544 55432 2211100 00000112233 3444 5443
Q ss_pred EecCCCCEEEEEEECC---CCceeEEEEecc--CCceeeeEEEeeCCEEEEEec------CCeEEEEeCCCCce
Q 045559 267 VFDERESCFDIWTMKE---RYHWTKEFSTTP--ILAVDAPIGFWKNDTFFIRSN------TEELLLYDPNSEEI 329 (335)
Q Consensus 267 ~~~~~~~~~~IW~l~~---~~~W~~~~~i~~--~~~~~~~~~~~~~~~il~~~~------~~~l~~yd~~~~~~ 329 (335)
..+ . .+..|+. ...|.....-.. ......|+.. ++.+++... +..|..||.+|++.
T Consensus 128 t~d---g--~l~AlDa~TG~~~W~~~~~~~~~~~~~~ssP~v~--~g~V~vg~~g~e~g~~g~v~A~D~~TG~~ 194 (599)
T 1w6s_A 128 QLD---G--NVAALNAETGETVWKVENSDIKVGSTLTIAPYVV--KDKVIIGSSGAELGVRGYLTAYDVKTGEQ 194 (599)
T ss_dssp CTT---S--EEEEEETTTCCEEEEEECCCGGGTCBCCSCCEEE--TTEEEECCBCGGGTCCCEEEEEETTTCCE
T ss_pred cCC---C--EEEEEECCCCCEEEeecCCCCCccceeecCCEEE--CCEEEEEecccccCCCCeEEEEECCCCcE
Confidence 321 2 2444443 445755311000 0112345442 566666542 46899999998764
No 179
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=39.56 E-value=1.6e+02 Score=24.23 Aligned_cols=30 Identities=0% Similarity=0.031 Sum_probs=20.1
Q ss_pred eeeEEEeeCCEEEEE-ecCCeEEEEeCCCCc
Q 045559 299 DAPIGFWKNDTFFIR-SNTEELLLYDPNSEE 328 (335)
Q Consensus 299 ~~~~~~~~~~~il~~-~~~~~l~~yd~~~~~ 328 (335)
..-+++.++|+.++. ..++.|..||++|++
T Consensus 309 v~~l~~s~dg~~l~sgs~Dg~v~iW~~~tGt 339 (340)
T 4aow_A 309 CTSLAWSADGQTLFAGYTDNLVRVWQVTIGT 339 (340)
T ss_dssp EEEEEECTTSSEEEEEETTSCEEEEEEEC--
T ss_pred EEEEEECCCCCEEEEEeCCCEEEEEeCCCcC
Confidence 344566678886654 457789999998864
No 180
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=38.99 E-value=1.5e+02 Score=23.90 Aligned_cols=63 Identities=11% Similarity=0.133 Sum_probs=39.1
Q ss_pred CCeEEEEEecCCCCEEEEEEECCCCceeEEEEec-cCCceeeeEEEeeCCEEEEEecCCeEEEEeCCCCce
Q 045559 260 NDSLSFLVFDERESCFDIWTMKERYHWTKEFSTT-PILAVDAPIGFWKNDTFFIRSNTEELLLYDPNSEEI 329 (335)
Q Consensus 260 ~g~L~~~~~~~~~~~~~IW~l~~~~~W~~~~~i~-~~~~~~~~~~~~~~~~il~~~~~~~l~~yd~~~~~~ 329 (335)
++...+.... ...+.+|-... ....+. .......-+.+.+++.++....++.+..||+++++.
T Consensus 154 ~~~~l~~~~~--d~~i~i~d~~~-----~~~~~~~~~~~~i~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~ 217 (313)
T 3odt_A 154 SENKFLTASA--DKTIKLWQNDK-----VIKTFSGIHNDVVRHLAVVDDGHFISCSNDGLIKLVDMHTGDV 217 (313)
T ss_dssp TTTEEEEEET--TSCEEEEETTE-----EEEEECSSCSSCEEEEEEEETTEEEEEETTSEEEEEETTTCCE
T ss_pred CCCEEEEEEC--CCCEEEEecCc-----eEEEEeccCcccEEEEEEcCCCeEEEccCCCeEEEEECCchhh
Confidence 5665555554 56788997322 222331 233345556667788866667778899999987654
No 181
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=38.48 E-value=2e+02 Score=25.20 Aligned_cols=64 Identities=6% Similarity=0.048 Sum_probs=38.7
Q ss_pred CeEEEEEecCCCCEEEEEEECCCCceeEEEEeccCCceeeeEEEeeCCEEEE-EecCCeEEEEeCCCCce
Q 045559 261 DSLSFLVFDERESCFDIWTMKERYHWTKEFSTTPILAVDAPIGFWKNDTFFI-RSNTEELLLYDPNSEEI 329 (335)
Q Consensus 261 g~L~~~~~~~~~~~~~IW~l~~~~~W~~~~~i~~~~~~~~~~~~~~~~~il~-~~~~~~l~~yd~~~~~~ 329 (335)
|++.+.+.. ...+.||-++. ..-...... .......-+.+. +++.++ ...++.|..||+++++.
T Consensus 210 ~~~l~s~~~--d~~i~vwd~~~-~~~~~~~~~-~h~~~v~~~~~s-d~~~l~s~~~d~~v~vwd~~~~~~ 274 (450)
T 2vdu_B 210 HQFIITSDR--DEHIKISHYPQ-CFIVDKWLF-GHKHFVSSICCG-KDYLLLSAGGDDKIFAWDWKTGKN 274 (450)
T ss_dssp CEEEEEEET--TSCEEEEEESC-TTCEEEECC-CCSSCEEEEEEC-STTEEEEEESSSEEEEEETTTCCE
T ss_pred CcEEEEEcC--CCcEEEEECCC-Cceeeeeec-CCCCceEEEEEC-CCCEEEEEeCCCeEEEEECCCCcE
Confidence 555555544 47899999986 332222211 223334445556 777554 55677899999998764
No 182
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=38.22 E-value=1.7e+02 Score=24.31 Aligned_cols=54 Identities=13% Similarity=0.019 Sum_probs=32.8
Q ss_pred eEEEEEECCccceeeecCCCccccCCCCeeEEEEeCCeEEEEEecCCCCEEEEEEECC
Q 045559 225 YVILSFDMSDEVFEEILGPNCLLEISPKHTVFGLYNDSLSFLVFDERESCFDIWTMKE 282 (335)
Q Consensus 225 ~~i~~fD~~~e~~~~i~~P~~~~~~~~~~~~l~~~~g~L~~~~~~~~~~~~~IW~l~~ 282 (335)
..|..||...+....+..|...... ....++.-+|.|++.... ...+.+..++.
T Consensus 260 ~~v~~~d~~G~~~~~~~~~~g~~~~--~~~~~~~~~g~L~v~~~~--~~~i~~~~~~~ 313 (322)
T 2fp8_A 260 PKGIKFDEFGNILEVIPLPPPFAGE--HFEQIQEHDGLLYIGTLF--HGSVGILVYDK 313 (322)
T ss_dssp EEEEEECTTSCEEEEEECCTTTTTS--CCCEEEEETTEEEEECSS--CSEEEEEEC--
T ss_pred cEEEEECCCCCEEEEEECCCCCccc--cceEEEEeCCEEEEeecC--CCceEEEeccc
Confidence 4799999987777777777532111 122344567888887655 45666665554
No 183
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=37.81 E-value=7.2 Score=34.39 Aligned_cols=27 Identities=4% Similarity=-0.230 Sum_probs=16.6
Q ss_pred eeeeecceEEEEeecCCCCCccCceEEEEEECCccc
Q 045559 201 DCTYHNGACHWLVPFGAFHPLCCHYVILSFDMSDEV 236 (335)
Q Consensus 201 ~~v~~~G~~ywl~~~~~~~~~~~~~~i~~fD~~~e~ 236 (335)
.++..+|.+|.-+.. ..|.++|..+.+
T Consensus 4 sP~v~~~~v~~gs~d---------g~v~a~d~~tG~ 30 (369)
T 2hz6_A 4 TVTLPETLLFVSTLD---------GSLHAVSKRTGS 30 (369)
T ss_dssp ----CTTEEEEEETT---------SEEEEEETTTCC
T ss_pred CCeeeCCEEEEEcCC---------CEEEEEECCCCC
Confidence 366778888876653 379999976543
No 184
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=37.58 E-value=2e+02 Score=24.89 Aligned_cols=97 Identities=12% Similarity=0.051 Sum_probs=50.8
Q ss_pred eEEEEEECCcccee-eecCCCccccCCCCeeEEEEe-CCeEEEEEecCCCCEEEEEEECCCCceeEEEEeccCCceeeeE
Q 045559 225 YVILSFDMSDEVFE-EILGPNCLLEISPKHTVFGLY-NDSLSFLVFDERESCFDIWTMKERYHWTKEFSTTPILAVDAPI 302 (335)
Q Consensus 225 ~~i~~fD~~~e~~~-~i~~P~~~~~~~~~~~~l~~~-~g~L~~~~~~~~~~~~~IW~l~~~~~W~~~~~i~~~~~~~~~~ 302 (335)
..|..+|+.+.+.. .+..|.... .-..+... +|.+.+.+.. .+.+.||-++. ..-.....+ +...-..-+
T Consensus 192 ~~i~iwd~~~~~~~~~~~~~~h~~----~v~~~~~s~~~~~l~s~~~--dg~i~iwd~~~-~~~~~~~~~-~~~~~v~~~ 263 (437)
T 3gre_A 192 SRVIIFDIRTLERLQIIENSPRHG----AVSSICIDEECCVLILGTT--RGIIDIWDIRF-NVLIRSWSF-GDHAPITHV 263 (437)
T ss_dssp SEEEEEETTTCCEEEEEECCGGGC----CEEEEEECTTSCEEEEEET--TSCEEEEETTT-TEEEEEEBC-TTCEEEEEE
T ss_pred CeEEEEeCCCCeeeEEEccCCCCC----ceEEEEECCCCCEEEEEcC--CCeEEEEEcCC-ccEEEEEec-CCCCceEEE
Confidence 47888998776543 334442211 12223333 5555555554 47799999886 333332222 222112222
Q ss_pred EE----eeCCEEEEEe-cCCeEEEEeCCCCce
Q 045559 303 GF----WKNDTFFIRS-NTEELLLYDPNSEEI 329 (335)
Q Consensus 303 ~~----~~~~~il~~~-~~~~l~~yd~~~~~~ 329 (335)
.+ ..++.+++.. .++.+..||+++++.
T Consensus 264 ~~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~ 295 (437)
T 3gre_A 264 EVCQFYGKNSVIVVGGSSKTFLTIWNFVKGHC 295 (437)
T ss_dssp EECTTTCTTEEEEEEESTTEEEEEEETTTTEE
T ss_pred EeccccCCCccEEEEEcCCCcEEEEEcCCCcE
Confidence 11 2356555544 466799999987764
No 185
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=37.38 E-value=3.5e+02 Score=27.56 Aligned_cols=188 Identities=10% Similarity=0.150 Sum_probs=90.1
Q ss_pred cccceEEEe-ecCceEEEEecchhhhhc-CCCCcccCCcCCceeeeeEEeecCCCCCeEEEEEEEEecCccccccCCCce
Q 045559 95 PFEGLFIMF-IGGDEIALYNHATRDLKF-LPKLTLIDNLESIYTIMFGLGLDPKCNYYKLVYIVTYHDSELGKVLNDSRQ 172 (335)
Q Consensus 95 s~~GLl~~~-~~~~~~~V~NP~T~~~~~-LP~~~~~~~~~~~~~~~~~l~~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~ 172 (335)
|.+|-.+.. .....+.|||..|++... +..... ....+.+.|.. .+-+... ..-.
T Consensus 624 s~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~h~~---------~v~~~~~s~~~-~~l~s~~-------------~d~~ 680 (1249)
T 3sfz_A 624 SQDGQRIASCGADKTLQVFKAETGEKLLDIKAHED---------EVLCCAFSSDD-SYIATCS-------------ADKK 680 (1249)
T ss_dssp CTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSS---------CEEEEEECTTS-SEEEEEE-------------TTSE
T ss_pred CCCCCEEEEEeCCCeEEEEECCCCCEEEEeccCCC---------CEEEEEEecCC-CEEEEEe-------------CCCe
Confidence 344544333 346789999999977542 221111 14566666643 3332221 1235
Q ss_pred EEEEEcCCCcceec-CcccccccccCCCceeeee----cceEEEEeecCCCCCccCceEEEEEECCccceeee-cCCCcc
Q 045559 173 VFIYSFSDNSWRNF-QGFEFGMYDLDEVLDCTYH----NGACHWLVPFGAFHPLCCHYVILSFDMSDEVFEEI-LGPNCL 246 (335)
Q Consensus 173 ~~vyss~~~~W~~~-~~~p~~~~~~~~~~~~v~~----~G~~ywl~~~~~~~~~~~~~~i~~fD~~~e~~~~i-~~P~~~ 246 (335)
+.|++..++.-... .....++ .++.+ ++.+...+.. ...|..+|+.+...... .....
T Consensus 681 v~vwd~~~~~~~~~~~~~~~~v-------~~~~~~~~~~~~~l~sg~~--------d~~v~vwd~~~~~~~~~~~~h~~- 744 (1249)
T 3sfz_A 681 VKIWDSATGKLVHTYDEHSEQV-------NCCHFTNKSNHLLLATGSN--------DFFLKLWDLNQKECRNTMFGHTN- 744 (1249)
T ss_dssp EEEEETTTCCEEEEEECCSSCE-------EEEEECSSSSCCEEEEEET--------TSCEEEEETTSSSEEEEECCCSS-
T ss_pred EEEEECCCCceEEEEcCCCCcE-------EEEEEecCCCceEEEEEeC--------CCeEEEEECCCcchhheecCCCC-
Confidence 88888887643211 1000000 01111 1222222221 23577788876654332 21111
Q ss_pred ccCCCCeeEEEEe-CCeEEEEEecCCCCEEEEEEECCCCceeEEEEec--------c---CCceeeeEEEeeCCEEEEEe
Q 045559 247 LEISPKHTVFGLY-NDSLSFLVFDERESCFDIWTMKERYHWTKEFSTT--------P---ILAVDAPIGFWKNDTFFIRS 314 (335)
Q Consensus 247 ~~~~~~~~~l~~~-~g~L~~~~~~~~~~~~~IW~l~~~~~W~~~~~i~--------~---~~~~~~~~~~~~~~~il~~~ 314 (335)
.-..+... +|...+.+.. .+.+.+|-+.. ..-....... + ......-+.+.++|+.++..
T Consensus 745 -----~v~~~~~sp~~~~l~s~s~--dg~v~vwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~ 816 (1249)
T 3sfz_A 745 -----SVNHCRFSPDDELLASCSA--DGTLRLWDVRS-ANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVA 816 (1249)
T ss_dssp -----CEEEEEECSSTTEEEEEES--SSEEEEEEGGG-TEEEEEEECCCCC--------CCCCCBCCCCBCTTSSEEEEE
T ss_pred -----CEEEEEEecCCCEEEEEEC--CCeEEEEeCCC-CcccceecccccccccCCccccccceEEEEEECCCCCEEEEE
Confidence 11122222 5554444444 57899998876 2222222210 0 00113334455677776666
Q ss_pred cCCeEEEEeCCCCce
Q 045559 315 NTEELLLYDPNSEEI 329 (335)
Q Consensus 315 ~~~~l~~yd~~~~~~ 329 (335)
.++.+..||..+++.
T Consensus 817 ~~~~v~~~d~~~~~~ 831 (1249)
T 3sfz_A 817 AKNKVLLFDIHTSGL 831 (1249)
T ss_dssp ETTEEEEEETTTCCE
T ss_pred cCCcEEEEEecCCCc
Confidence 667899999887654
No 186
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=37.17 E-value=1.8e+02 Score=24.13 Aligned_cols=66 Identities=12% Similarity=0.027 Sum_probs=36.6
Q ss_pred CeEEEEEecCCCCEEEEEEECC-C----------CceeEEEEeccCCceeeeEEEeeC--CEEEEE-ecCCeEEEEeCCC
Q 045559 261 DSLSFLVFDERESCFDIWTMKE-R----------YHWTKEFSTTPILAVDAPIGFWKN--DTFFIR-SNTEELLLYDPNS 326 (335)
Q Consensus 261 g~L~~~~~~~~~~~~~IW~l~~-~----------~~W~~~~~i~~~~~~~~~~~~~~~--~~il~~-~~~~~l~~yd~~~ 326 (335)
|.+.+.... .+.+.+|-+.. . ..............-..-+.+..+ +++++. ..++.+..||+++
T Consensus 241 ~~~l~~~~~--d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~l~~~~~dg~i~vwd~~~ 318 (366)
T 3k26_A 241 GDLILSKSC--ENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQKMLALGNQVGKLYVWDLEV 318 (366)
T ss_dssp TTEEEEECS--SSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCCSSCCCCEECTTSSEEEEECTTSCEEEEECCS
T ss_pred CCEEEEEec--CCEEEEEeCCCccccccccccCCcchheeccccccCCcEEEEEEcCCCCCcEEEEEecCCcEEEEECCC
Confidence 554444443 57899999876 1 112223333111222333444556 776554 4567899999988
Q ss_pred Cc
Q 045559 327 EE 328 (335)
Q Consensus 327 ~~ 328 (335)
++
T Consensus 319 ~~ 320 (366)
T 3k26_A 319 ED 320 (366)
T ss_dssp SS
T ss_pred CC
Confidence 64
No 187
>1evh_A WH1 domain, protein (MENA EVH1 domain); molecular recognition, actin dynamics, contractIle protein; 1.80A {Mus musculus} SCOP: b.55.1.4 PDB: 2xqn_M 2iyb_A
Probab=37.07 E-value=39 Score=24.13 Aligned_cols=43 Identities=12% Similarity=0.078 Sum_probs=29.6
Q ss_pred CceEEEEecchhhhhcCCCCcccCCcCCceeeeeEEeecCCCCCeEEEEEE
Q 045559 106 GDEIALYNHATRDLKFLPKLTLIDNLESIYTIMFGLGLDPKCNYYKLVYIV 156 (335)
Q Consensus 106 ~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~l~~d~~~~~ykVv~~~ 156 (335)
...+++++|.|+.| +|..... ..+...+..|...+.|+|+...
T Consensus 10 ~A~V~~~d~~~~~W--~p~~~~~------g~s~V~~~~d~~~~~yrIv~~~ 52 (112)
T 1evh_A 10 RAAVMVYDDANKKW--VPAGGST------GFSRVHIYHHTGNNTFRVVGRK 52 (112)
T ss_dssp EEEEEEEETTTTEE--EEGGGCC------SCEEEEEEEETTTTEEEEEEEE
T ss_pred EEEEEEEcCCCCce--EECCCCC------CceEEEEEEECCCCEEEEEEEE
Confidence 45688999999966 4444211 1124778888888899998874
No 188
>1ddw_A GLGF-domain protein homer; pleckstrin homology domain fold, signaling protein; 1.70A {Rattus norvegicus} SCOP: b.55.1.4 PDB: 1ddv_A 2p8v_A 1i7a_A*
Probab=36.64 E-value=41 Score=24.40 Aligned_cols=40 Identities=13% Similarity=0.180 Sum_probs=28.5
Q ss_pred CceEEEEecchh-hhhcCCCCcccCCcCCceeeeeEEeecCCCCCeEEEEE
Q 045559 106 GDEIALYNHATR-DLKFLPKLTLIDNLESIYTIMFGLGLDPKCNYYKLVYI 155 (335)
Q Consensus 106 ~~~~~V~NP~T~-~~~~LP~~~~~~~~~~~~~~~~~l~~d~~~~~ykVv~~ 155 (335)
...+++.||.|+ .|...-... . ...+-+|+..+.|+|+.+
T Consensus 10 rA~V~~~D~~tk~~W~p~g~~~-~---------~V~~~~d~~~~~yRIv~~ 50 (120)
T 1ddw_A 10 RAHVFQIDPNTKKNWVPTSKHA-V---------TVSYFYDSTRNVYRIISL 50 (120)
T ss_dssp EEEEEEECTTTSCSEEESCSSC-E---------EEEEEEETTTTEEEEEEE
T ss_pred EEEEEEEcCCCCCceEeCCCCc-e---------EEEEEEcCCCCEEEEEEc
Confidence 456889999996 886543332 1 456777888888998875
No 189
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=35.79 E-value=2.5e+02 Score=26.44 Aligned_cols=93 Identities=15% Similarity=0.216 Sum_probs=55.2
Q ss_pred EEEEEECCccceeee-cCCCccccCCCCeeEEEEe-CCeEEEEEecCCCCEEEEEEECCCCceeEEEEeccCCceeeeEE
Q 045559 226 VILSFDMSDEVFEEI-LGPNCLLEISPKHTVFGLY-NDSLSFLVFDERESCFDIWTMKERYHWTKEFSTTPILAVDAPIG 303 (335)
Q Consensus 226 ~i~~fD~~~e~~~~i-~~P~~~~~~~~~~~~l~~~-~g~L~~~~~~~~~~~~~IW~l~~~~~W~~~~~i~~~~~~~~~~~ 303 (335)
.|-.+|+.+.+.... ..... .-..+... +|++.+.+.. ...+.||-+.. . ...+.+ .......-++
T Consensus 542 ~v~vwd~~~~~~~~~~~~h~~------~v~~v~~spdg~~l~sg~~--Dg~i~iwd~~~-~--~~~~~~-~~~~~v~~~~ 609 (694)
T 3dm0_A 542 TVKVWNLSNCKLRSTLAGHTG------YVSTVAVSPDGSLCASGGK--DGVVLLWDLAE-G--KKLYSL-EANSVIHALC 609 (694)
T ss_dssp CEEEEETTTCCEEEEECCCSS------CEEEEEECTTSSEEEEEET--TSBCEEEETTT-T--EEEECC-BCSSCEEEEE
T ss_pred eEEEEECCCCcEEEEEcCCCC------CEEEEEEeCCCCEEEEEeC--CCeEEEEECCC-C--ceEEEe-cCCCcEEEEE
Confidence 466777766544322 21110 12233333 5665555554 57899999876 3 233444 3333455566
Q ss_pred EeeCCEEEEEecCCeEEEEeCCCCcee
Q 045559 304 FWKNDTFFIRSNTEELLLYDPNSEEII 330 (335)
Q Consensus 304 ~~~~~~il~~~~~~~l~~yd~~~~~~~ 330 (335)
+.+++.++....+..+..||+++++..
T Consensus 610 ~sp~~~~l~~~~~~~i~iwd~~~~~~~ 636 (694)
T 3dm0_A 610 FSPNRYWLCAATEHGIKIWDLESKSIV 636 (694)
T ss_dssp ECSSSSEEEEEETTEEEEEETTTTEEE
T ss_pred EcCCCcEEEEEcCCCEEEEECCCCCCh
Confidence 777888877777778999999987753
No 190
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=35.28 E-value=2.7e+02 Score=25.62 Aligned_cols=101 Identities=8% Similarity=0.038 Sum_probs=60.5
Q ss_pred eEEEEEECCccceeee-cCCCccccCCCCeeEEEEeC-CeEEEEEecCCCCEEEEEEECC----CCceeEEEEeccCCc-
Q 045559 225 YVILSFDMSDEVFEEI-LGPNCLLEISPKHTVFGLYN-DSLSFLVFDERESCFDIWTMKE----RYHWTKEFSTTPILA- 297 (335)
Q Consensus 225 ~~i~~fD~~~e~~~~i-~~P~~~~~~~~~~~~l~~~~-g~L~~~~~~~~~~~~~IW~l~~----~~~W~~~~~i~~~~~- 297 (335)
..|..+|+.+.+.... +....... .....+..-+ |.+++.... ..+.+.||-++. ...|..+.++ +...
T Consensus 346 ~~v~v~D~~tg~l~~~i~~g~~ph~--g~g~~~~~p~~g~~~~s~~~-~d~~V~v~d~~~~~~~~~~~~~v~~l-~~~g~ 421 (543)
T 1nir_A 346 NKVAVIDSKDRRLSALVDVGKTPHP--GRGANFVHPKYGPVWSTSHL-GDGSISLIGTDPKNHPQYAWKKVAEL-QGQGG 421 (543)
T ss_dssp TEEEEEETTTTEEEEEEECSSSBCC--TTCEEEEETTTEEEEEEEBS-SSSEEEEEECCTTTCTTTBTSEEEEE-ECSCS
T ss_pred CeEEEEECCCCeEEEeeccCCCCCC--CCCcccCCCCCccEEEeccC-CCceEEEEEeCCCCCchhcCeEEEEE-EcCCC
Confidence 3677799988765443 32111100 0122333334 556555442 257899999886 2349998888 5432
Q ss_pred eeeeEEEeeCCEEEEEec--------CCeEEEEeCCCCce
Q 045559 298 VDAPIGFWKNDTFFIRSN--------TEELLLYDPNSEEI 329 (335)
Q Consensus 298 ~~~~~~~~~~~~il~~~~--------~~~l~~yd~~~~~~ 329 (335)
-...+.++++|+.+.... +..+.+||.++.+.
T Consensus 422 ~~~~v~~~pdg~~l~v~~~~~~~~~~~~~v~v~d~~~~~~ 461 (543)
T 1nir_A 422 GSLFIKTHPKSSHLYVDTTFNPDARISQSVAVFDLKNLDA 461 (543)
T ss_dssp CCCCEECCTTCCEEEECCTTCSSHHHHTCEEEEETTCTTS
T ss_pred CceEEEcCCCCCcEEEecCCCCCcccCceEEEEECCCCCC
Confidence 234466678888666543 45899999998764
No 191
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=35.03 E-value=2.3e+02 Score=24.78 Aligned_cols=199 Identities=10% Similarity=0.041 Sum_probs=101.6
Q ss_pred cccccceEEEeecCceEEEEecchhhhhcCCCCcccCCcCCceeeeeEEeecCCCCCeEEEEEEEEecCccccccCC--C
Q 045559 93 RGPFEGLFIMFIGGDEIALYNHATRDLKFLPKLTLIDNLESIYTIMFGLGLDPKCNYYKLVYIVTYHDSELGKVLND--S 170 (335)
Q Consensus 93 ~~s~~GLl~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~l~~d~~~~~ykVv~~~~~~~~~~~~~~~~--~ 170 (335)
.++...+++-......++|+|-.-++...||..... +.. .+.+|... ....-++.+.+ .. .
T Consensus 36 ~dp~~s~ii~t~k~~gL~Vydl~G~~l~~~~~g~~n----nVD-~r~~~~l~--g~~~dla~as~----------R~~~~ 98 (355)
T 3amr_A 36 KTPQNSKLITTNKKSGLVVYSLDGKMLHSYNTGKLN----NVD-IRYDFPLN--GKKVDIAAASN----------RSEGK 98 (355)
T ss_dssp SCGGGCEEEEEETTTEEEEEETTSCEEEEECCSCEE----EEE-EEEEEEET--TEEEEEEEEEE----------CSTTC
T ss_pred CCCCccEEEEEcCCCCEEEEcCCCcEEEEccCCCcc----cEE-EecccccC--CceEeEEEEeC----------CCCCC
Confidence 355677766665567899999965666677653222 111 13333321 11222333322 22 4
Q ss_pred ceEEEEEc--CCCcceecCcc--ccccc-ccCCCceeeee-----cceEEEEeecCCCCCccCceEEEEEEC--------
Q 045559 171 RQVFIYSF--SDNSWRNFQGF--EFGMY-DLDEVLDCTYH-----NGACHWLVPFGAFHPLCCHYVILSFDM-------- 232 (335)
Q Consensus 171 ~~~~vyss--~~~~W~~~~~~--p~~~~-~~~~~~~~v~~-----~G~~ywl~~~~~~~~~~~~~~i~~fD~-------- 232 (335)
.++.+|+. .++.++.+..+ |.... ..+ +++++ .|.+|.+..... ..+.-|++
T Consensus 99 n~l~vf~iDp~~~~l~~i~~~~~pv~t~~~~p---yGlcly~~~~~g~~yafV~~k~-------G~~~q~~l~~~~~g~~ 168 (355)
T 3amr_A 99 NTIEIYAIDGKNGTLQSMTDPDHPIATAINEV---YGFTLYHSQKTGKYYAMVTGKE-------GEFEQYELKADKNGYI 168 (355)
T ss_dssp CEEEEEEECTTTCCEEECSCTTSCEECCCSSC---CCEEEEECTTTCCEEEEEECSS-------SEEEEEEEEECTTSCE
T ss_pred CeEEEEEECCCCCceeeccccccCcCCCCCCe---eEEEEEecCCCCcEEEEEECCC-------CeEEEEEEEeCCCCcc
Confidence 57889965 67788888543 42211 222 45554 366776665442 24444443
Q ss_pred CccceeeecCCCccccCCCCeeEEEEeCCeEEEEEecCCCCEEEEEEECC--C--CceeEEEEeccCCce---eeeEEE-
Q 045559 233 SDEVFEEILGPNCLLEISPKHTVFGLYNDSLSFLVFDERESCFDIWTMKE--R--YHWTKEFSTTPILAV---DAPIGF- 304 (335)
Q Consensus 233 ~~e~~~~i~~P~~~~~~~~~~~~l~~~~g~L~~~~~~~~~~~~~IW~l~~--~--~~W~~~~~i~~~~~~---~~~~~~- 304 (335)
+.+.-+.+++|...+ .+..-.-.|.|++.... ..||.++- . ..-..+..+ +...+ ..-+.+
T Consensus 169 ~~~lVR~f~lgsq~E-----gcvvDd~~g~Lyv~eEd-----~GIw~~da~p~~~~~~~~v~~~-~~g~l~aDvEGLai~ 237 (355)
T 3amr_A 169 SGKKVRAFKMNSQTE-----GMAADDEYGRLYIAEED-----EAIWKFSAEPDGGSNGTVIDRA-DGRHLTRDIEGLTIY 237 (355)
T ss_dssp EEEEEEEEECSSCEE-----EEEEETTTTEEEEEETT-----TEEEEEECSTTSCSCCEEEEEB-SSSSBCSCEEEEEEE
T ss_pred cceEEEEecCCCCcc-----eEEEcCCCCeEEEeccc-----ceEEEEeCCcCCCCCceEEEEe-cCCccccCcceEEEE
Confidence 223345556665432 11122234667766543 34899995 1 234566666 34433 222223
Q ss_pred -eeCCE--EEEEe-cCCeEEEEeCC-CCce
Q 045559 305 -WKNDT--FFIRS-NTEELLLYDPN-SEEI 329 (335)
Q Consensus 305 -~~~~~--il~~~-~~~~l~~yd~~-~~~~ 329 (335)
..+++ ++... +++.+.+||.+ ++++
T Consensus 238 ~~~~g~gyLivSsQG~~s~~Vydr~~~~~~ 267 (355)
T 3amr_A 238 YAADGKGYLMASSQGNSSYAIYDRQGKNKY 267 (355)
T ss_dssp ECGGGCEEEEEEEGGGTEEEEEESSTTCCE
T ss_pred ecCCCCEEEEEEcCCCCEEEEEECCCCCcE
Confidence 23333 44433 46789999997 4443
No 192
>2dk7_A Transcription elongation regulator 1; structural genomics, WW domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=34.48 E-value=38 Score=22.16 Aligned_cols=19 Identities=16% Similarity=0.522 Sum_probs=14.5
Q ss_pred EEEEecCCeEEEEeCCCCc
Q 045559 310 FFIRSNTEELLLYDPNSEE 328 (335)
Q Consensus 310 il~~~~~~~l~~yd~~~~~ 328 (335)
.+....++++|+||..|++
T Consensus 23 ~~v~T~dGR~fyyN~~Tk~ 41 (73)
T 2dk7_A 23 CVVWTGDERVFFYNPTTRL 41 (73)
T ss_dssp EEEEESSSCEEEEETTTTE
T ss_pred EEEECCCCCEEEecCcccc
Confidence 4455567889999999875
No 193
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=33.76 E-value=3.2e+02 Score=26.04 Aligned_cols=95 Identities=8% Similarity=0.145 Sum_probs=47.6
Q ss_pred eEEEEEECCcc-ceeee-cCCCccccCCCCeeEEEEe--CCeEEEEEecCCCCEEEEEEECCCCceeEEEEeccCCceee
Q 045559 225 YVILSFDMSDE-VFEEI-LGPNCLLEISPKHTVFGLY--NDSLSFLVFDERESCFDIWTMKERYHWTKEFSTTPILAVDA 300 (335)
Q Consensus 225 ~~i~~fD~~~e-~~~~i-~~P~~~~~~~~~~~~l~~~--~g~L~~~~~~~~~~~~~IW~l~~~~~W~~~~~i~~~~~~~~ 300 (335)
..|..+|+.+. ..... ..... .-..+.-. +|.+.+.... .+.+.+|-++. ..-...... ....-..
T Consensus 119 g~i~vw~~~~~~~~~~~~~~~~~------~v~~~~~~p~~~~~l~~~~~--dg~v~vwd~~~-~~~~~~~~~-~~~~~v~ 188 (814)
T 3mkq_A 119 LTVKLWNWENNWALEQTFEGHEH------FVMCVAFNPKDPSTFASGCL--DRTVKVWSLGQ-STPNFTLTT-GQERGVN 188 (814)
T ss_dssp SEEEEEEGGGTSEEEEEEECCSS------CEEEEEEETTEEEEEEEEET--TSEEEEEETTC-SSCSEEEEC-CCTTCCC
T ss_pred CEEEEEECCCCceEEEEEcCCCC------cEEEEEEEcCCCCEEEEEeC--CCeEEEEECCC-CcceeEEec-CCCCCEE
Confidence 36777887765 22221 11110 12233333 3444444444 57899999876 221222222 1212233
Q ss_pred eEEEee--CCEEEE-EecCCeEEEEeCCCCce
Q 045559 301 PIGFWK--NDTFFI-RSNTEELLLYDPNSEEI 329 (335)
Q Consensus 301 ~~~~~~--~~~il~-~~~~~~l~~yd~~~~~~ 329 (335)
.+.+.. ++..++ ...++.+..||.++++.
T Consensus 189 ~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~ 220 (814)
T 3mkq_A 189 YVDYYPLPDKPYMITASDDLTIKIWDYQTKSC 220 (814)
T ss_dssp EEEECCSTTCCEEEEECTTSEEEEEETTTTEE
T ss_pred EEEEEECCCCCEEEEEeCCCEEEEEECCCCcE
Confidence 344444 666544 44567889999887654
No 194
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=33.23 E-value=2.3e+02 Score=24.19 Aligned_cols=63 Identities=8% Similarity=0.094 Sum_probs=40.5
Q ss_pred CCeEEEEEecCCCCEEEEEEECCCCceeEEEEec-cCCceeeeEEEeeCCEEEEE-ecCCeEEEEeCCCC
Q 045559 260 NDSLSFLVFDERESCFDIWTMKERYHWTKEFSTT-PILAVDAPIGFWKNDTFFIR-SNTEELLLYDPNSE 327 (335)
Q Consensus 260 ~g~L~~~~~~~~~~~~~IW~l~~~~~W~~~~~i~-~~~~~~~~~~~~~~~~il~~-~~~~~l~~yd~~~~ 327 (335)
+|++.+.... ...+.||-++. . ....++. -......-+++.+||+.++. ..++.+-++|+.++
T Consensus 280 dg~~lasgs~--D~~V~iwd~~~-~--~~~~~~~~gH~~~V~~v~fSpdg~~laS~S~D~tvrvw~ip~~ 344 (365)
T 4h5i_A 280 KGELAVLASN--DNSIALVKLKD-L--SMSKIFKQAHSFAITEVTISPDSTYVASVSAANTIHIIKLPLN 344 (365)
T ss_dssp TSCEEEEEET--TSCEEEEETTT-T--EEEEEETTSSSSCEEEEEECTTSCEEEEEETTSEEEEEECCTT
T ss_pred CCCceEEEcC--CCEEEEEECCC-C--cEEEEecCcccCCEEEEEECCCCCEEEEEeCCCeEEEEEcCCC
Confidence 6665554444 46799998875 2 3444551 12333556777889987664 56788999997543
No 195
>2crf_A RAN binding protein 3; RAN_BP1 domain, ranbp3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.55.1.3
Probab=33.02 E-value=29 Score=26.36 Aligned_cols=28 Identities=11% Similarity=0.312 Sum_probs=20.6
Q ss_pred CCEEEEEecCCeEEEEeCCCCceeecccC
Q 045559 307 NDTFFIRSNTEELLLYDPNSEEIIDFQHK 335 (335)
Q Consensus 307 ~~~il~~~~~~~l~~yd~~~~~~~~v~~~ 335 (335)
+.+.++..++ +|+.||.++++|++-++|
T Consensus 25 ~E~~l~~~ra-KL~~fd~~~~~WkERG~G 52 (150)
T 2crf_A 25 AESNVLQMQC-KLFVFDKTSQSWVERGRG 52 (150)
T ss_dssp CCEEEEEEEE-EEEEEETTTTEEEEEEEE
T ss_pred CeEEEEEEEe-EEEEEcCCCCCcccceeE
Confidence 3446666664 799999989999887653
No 196
>1egx_A VAsp, vasodilator-stimulated phosphoprotein; EVH1, VAsp-ENA, poly-proline-binding domain, signaling protein; NMR {Homo sapiens} SCOP: b.55.1.4
Probab=32.97 E-value=53 Score=23.57 Aligned_cols=44 Identities=16% Similarity=0.136 Sum_probs=30.0
Q ss_pred CceEEEEecchhhhhcCCCCcccCCcCCceeeeeEEeecCCCCCeEEEEEE
Q 045559 106 GDEIALYNHATRDLKFLPKLTLIDNLESIYTIMFGLGLDPKCNYYKLVYIV 156 (335)
Q Consensus 106 ~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~l~~d~~~~~ykVv~~~ 156 (335)
...+++++|.|+.|. |..... ...+...+..|...+.|.++...
T Consensus 10 ~A~V~~~d~~~~~W~--p~~~g~-----~gvs~V~~~~d~~~~~yrI~~~~ 53 (115)
T 1egx_A 10 RATVMLYDDGNKRWL--PAGTGP-----QAFSRVQIYHNPTANSFRVVGRK 53 (115)
T ss_dssp EEECBEECTTTSSCC--BSSCSC-----CCCEEEEEEEETTTTEEEEEEEE
T ss_pred EEEEEEEcCCCCcee--ECCCCC-----CCccEEEEEEeCCCCEEEEEEEE
Confidence 446789999999974 544311 01225778889888899998874
No 197
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=32.97 E-value=2.3e+02 Score=24.07 Aligned_cols=99 Identities=9% Similarity=-0.007 Sum_probs=51.7
Q ss_pred EEEEEECC-ccceeee---cCCC-ccccCCCCeeEEEE-eCCe-EEEEEecCCCCEEEEEEECC-CCceeE-EEEec--c
Q 045559 226 VILSFDMS-DEVFEEI---LGPN-CLLEISPKHTVFGL-YNDS-LSFLVFDERESCFDIWTMKE-RYHWTK-EFSTT--P 294 (335)
Q Consensus 226 ~i~~fD~~-~e~~~~i---~~P~-~~~~~~~~~~~l~~-~~g~-L~~~~~~~~~~~~~IW~l~~-~~~W~~-~~~i~--~ 294 (335)
.|..||+. +.+...+ ..|. .. ....++. -+|+ |++.... .+.+.+|.++. +..... ...+. |
T Consensus 168 ~v~~~~~~~~g~~~~~~~~~~~~~g~-----~p~~~~~spdg~~l~v~~~~--~~~v~v~~~~~~~g~~~~~~~~~~~~~ 240 (365)
T 1jof_A 168 KLWTHRKLASGEVELVGSVDAPDPGD-----HPRWVAMHPTGNYLYALMEA--GNRICEYVIDPATHMPVYTHHSFPLIP 240 (365)
T ss_dssp EEEEEEECTTSCEEEEEEEECSSTTC-----CEEEEEECTTSSEEEEEETT--TTEEEEEEECTTTCCEEEEEEEEESSC
T ss_pred EEEEEEECCCCCEEEeeeEecCCCCC-----CCCEeEECCCCCEEEEEECC--CCeEEEEEEeCCCCcEEEccceEEcCC
Confidence 67778887 5554432 3332 11 1122333 3665 5555433 57899999875 344332 12231 2
Q ss_pred CC--c---------eeeeEE-EeeCCEEEEEe--cCC-----eEEEEeCC-CCceee
Q 045559 295 IL--A---------VDAPIG-FWKNDTFFIRS--NTE-----ELLLYDPN-SEEIID 331 (335)
Q Consensus 295 ~~--~---------~~~~~~-~~~~~~il~~~--~~~-----~l~~yd~~-~~~~~~ 331 (335)
.. . ...-+. +.+||+.++.. ..+ .+.+||++ +++++.
T Consensus 241 ~~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~~~~~~~~~i~v~~~~~~g~~~~ 297 (365)
T 1jof_A 241 PGIPDRDPETGKGLYRADVCALTFSGKYMFASSRANKFELQGYIAGFKLRDCGSIEK 297 (365)
T ss_dssp TTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEECTTSCEEE
T ss_pred CCcCCcccccccccccccEEEECCCCCEEEEECCCCCCCCCCeEEEEEECCCCCEEE
Confidence 21 1 133345 66888854433 233 78899885 566653
No 198
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=32.66 E-value=2.5e+02 Score=24.38 Aligned_cols=57 Identities=9% Similarity=0.221 Sum_probs=38.0
Q ss_pred CCEEEEEEECCCCceeEEEEeccCCceeeeEEEeeCCEEEE-EecCCeEEEEeCCCCce
Q 045559 272 ESCFDIWTMKERYHWTKEFSTTPILAVDAPIGFWKNDTFFI-RSNTEELLLYDPNSEEI 329 (335)
Q Consensus 272 ~~~~~IW~l~~~~~W~~~~~i~~~~~~~~~~~~~~~~~il~-~~~~~~l~~yd~~~~~~ 329 (335)
.+.+.||-.+. ..-.+............-+++.++|++++ ...++.+..||.++++.
T Consensus 124 d~tV~lWd~~t-g~~~~~~~~~~~~~~V~sv~fspdg~~lasgs~Dg~v~iWd~~~~~~ 181 (420)
T 4gga_A 124 DNSVYLWSASS-GDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKR 181 (420)
T ss_dssp TTEEEEEETTT-CCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTTEE
T ss_pred CCEEEEEECCC-CCEEEEEEecCCCCcEEEEEECCCCCEEEEEECCCeEEEEEcCCCcE
Confidence 36899998876 55455555422233345566677888655 45577899999988765
No 199
>3s3x_D Psalmotoxin-1; acid-sensing, ION channel, membrane protein, sodium channel, membrane, glycoprotein, ION transport, membrane; HET: NAG; 2.99A {Psalmopoeus cambridgei} PDB: 2kni_A 1lmm_A 4fz0_M* 4fz1_D*
Probab=32.58 E-value=19 Score=18.98 Aligned_cols=23 Identities=17% Similarity=-0.031 Sum_probs=18.4
Q ss_pred cccccceEEEeecCceEEEEecch
Q 045559 93 RGPFEGLFIMFIGGDEIALYNHAT 116 (335)
Q Consensus 93 ~~s~~GLl~~~~~~~~~~V~NP~T 116 (335)
-++|.||-|-.. .+.+-||-|-|
T Consensus 14 gdcceglecwkr-rrsfevcvpkt 36 (37)
T 3s3x_D 14 GDCCEGLECWKR-RRSFEVCVPKT 36 (37)
T ss_dssp TCBCTTEEEECC-SSSCCEEEECC
T ss_pred cchhhhHHHHHh-ccceeeecCCC
Confidence 358999999887 77788888865
No 200
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=32.47 E-value=2.5e+02 Score=27.11 Aligned_cols=122 Identities=11% Similarity=0.145 Sum_probs=62.1
Q ss_pred eeecceEEEEeecCC--CCCccCceEEEEEECCc--------cceeeecCCCccccCCCCeeEEEEeCCeEEEEEecCCC
Q 045559 203 TYHNGACHWLVPFGA--FHPLCCHYVILSFDMSD--------EVFEEILGPNCLLEISPKHTVFGLYNDSLSFLVFDERE 272 (335)
Q Consensus 203 v~~~G~~ywl~~~~~--~~~~~~~~~i~~fD~~~--------e~~~~i~~P~~~~~~~~~~~~l~~~~g~L~~~~~~~~~ 272 (335)
...+|.+|......- .........|++.|+.+ ..|+.+-.|.... .-..+...++.|.+.......
T Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~l~~~~~~~~~l~~~~~~~~~ 371 (711)
T 4hvt_A 296 GSFKEYVFWLLRSDWKFKSHNIKAGSLVALHFTDLLKTESDKTSLKILFTPTANE----VFNFISTTKDRVFLATYDNVV 371 (711)
T ss_dssp EEETTEEEEECSSCEEETTEEECTTCEEEEEGGGGGSCGGGCTTCEEEECCCTTE----EEEEEEECSSCEEEEEEETTE
T ss_pred eeECCEEEEEECcccccccccCCCCeEEEEECCcccccccccccceEEECCCCCC----eEEEEEEECCEEEEEEEECCE
Confidence 366888888653320 00000045799999875 3577643343221 122455556777666665333
Q ss_pred CEEEEEEECCCCceeEEEEeccCCc--eeeeEEEeeCC-EEEEEec----CCeEEEEeCCCCceee
Q 045559 273 SCFDIWTMKERYHWTKEFSTTPILA--VDAPIGFWKND-TFFIRSN----TEELLLYDPNSEEIID 331 (335)
Q Consensus 273 ~~~~IW~l~~~~~W~~~~~i~~~~~--~~~~~~~~~~~-~il~~~~----~~~l~~yd~~~~~~~~ 331 (335)
..+.++-++. +.|.....+ +++. .........++ .+++... ...++.||++ ++.+.
T Consensus 372 ~~l~~~~~~~-g~~~~~~~i-~lp~~~~~~~~~~~~~~~~~~~~~ss~~~P~~~~~~d~~-~~~~~ 434 (711)
T 4hvt_A 372 AKVVTFTLEN-EQWTKPVVL-KLPYQNAIFGMSSYEEEEEALITIENSIVPPTIYLWVKT-HELKI 434 (711)
T ss_dssp EEEEEECEET-TEECCCEEE-CCCSTTCEEEEECCTTCSCEEEEEECSSSCCEEEEECTT-SCEEE
T ss_pred EEEEEEECCC-CceEEEecc-CCCCCeEEEEEeecCcCCEEEEEEecCCCCCEEEEEeCC-CcEEE
Confidence 4454544443 667433224 3432 23333333344 4655432 4579999987 55543
No 201
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=32.19 E-value=2e+02 Score=23.25 Aligned_cols=58 Identities=9% Similarity=0.228 Sum_probs=37.1
Q ss_pred CCEEEEEEECCCCceeEEEEeccCCceeeeEEEeeCCEEEEE-ecCCeEEEEeCCCCcee
Q 045559 272 ESCFDIWTMKERYHWTKEFSTTPILAVDAPIGFWKNDTFFIR-SNTEELLLYDPNSEEII 330 (335)
Q Consensus 272 ~~~~~IW~l~~~~~W~~~~~i~~~~~~~~~~~~~~~~~il~~-~~~~~l~~yd~~~~~~~ 330 (335)
.+.+.||-++. .+-.+..+.........-+.+.++|+.++. ..++.+..||.++++..
T Consensus 44 D~tV~iWd~~t-g~~~~~~~~~~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~~~~ 102 (318)
T 4ggc_A 44 DNSVYLWSASS-GDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRL 102 (318)
T ss_dssp TTEEEEEETTT-CCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEE
T ss_pred CCEEEEEECCC-CCEEEEEEecCCCCeEEEEEECCCCCEEEEEECCCcEEEeecCCceeE
Confidence 36799998876 544444444212223455666777776554 45778999999987653
No 202
>3kvp_A Uncharacterized protein YMZC; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.40A {Bacillus subtilis}
Probab=32.14 E-value=29 Score=22.22 Aligned_cols=25 Identities=12% Similarity=0.204 Sum_probs=16.4
Q ss_pred CCEEEEEe-cCCeEEEEeCCCCceee
Q 045559 307 NDTFFIRS-NTEELLLYDPNSEEIID 331 (335)
Q Consensus 307 ~~~il~~~-~~~~l~~yd~~~~~~~~ 331 (335)
++.+=+.. +.-+++.||.++|+++-
T Consensus 29 ~nhFgv~e~g~iKIykyde~tNeI~L 54 (72)
T 3kvp_A 29 HNHFGVMEDGYIKIYEYNESRNEVKL 54 (72)
T ss_dssp TTEEEEEETTEEEEEEEETTTTEEEE
T ss_pred CCEEEEEeCCEEEEEEeCCCCCeEEE
Confidence 44553333 23468999999998863
No 203
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=31.98 E-value=2.1e+02 Score=23.30 Aligned_cols=34 Identities=9% Similarity=0.102 Sum_probs=22.6
Q ss_pred eeeEEEeeCCEEEE-EecCCeEEEEeCCCC-ceeec
Q 045559 299 DAPIGFWKNDTFFI-RSNTEELLLYDPNSE-EIIDF 332 (335)
Q Consensus 299 ~~~~~~~~~~~il~-~~~~~~l~~yd~~~~-~~~~v 332 (335)
..-+.+.+++++++ ...++.+..||++++ +++.+
T Consensus 309 v~~~~~s~~~~~l~s~~~dg~v~iw~~~~~~~~~~~ 344 (351)
T 3f3f_A 309 VWSVSWNLTGTILSSAGDDGKVRLWKATYSNEFKCM 344 (351)
T ss_dssp EEEEEECSSSCCEEEEETTSCEEEEEECTTSCEEEE
T ss_pred EEEEEEcCCCCEEEEecCCCcEEEEecCcCcchhhe
Confidence 44455666787554 455778999998874 55544
No 204
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=31.94 E-value=2.2e+02 Score=23.67 Aligned_cols=66 Identities=8% Similarity=0.037 Sum_probs=35.5
Q ss_pred CeEEEEEecCCCCEEEEEEECCCCceeEEEEeccCCceeeeEEEeeCCEEEEE-ecCCeEEEEeCCCCce
Q 045559 261 DSLSFLVFDERESCFDIWTMKERYHWTKEFSTTPILAVDAPIGFWKNDTFFIR-SNTEELLLYDPNSEEI 329 (335)
Q Consensus 261 g~L~~~~~~~~~~~~~IW~l~~~~~W~~~~~i~~~~~~~~~~~~~~~~~il~~-~~~~~l~~yd~~~~~~ 329 (335)
+.+.+.+.. ...+.||-++. ........+.....-..-+.+..++.+++. ..++.+..||+++++.
T Consensus 48 ~~~l~tgs~--D~~v~vW~~~~-~~~~~~~~l~gh~~~v~~~~~~~~~~~l~s~s~D~~i~lWd~~~~~~ 114 (321)
T 3ow8_A 48 SETVVTGSL--DDLVKVWKWRD-ERLDLQWSLEGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLENGKQ 114 (321)
T ss_dssp -CEEEEEET--TSCEEEEEEET-TEEEEEEEECCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEE
T ss_pred CCEEEEEcC--CCCEEEEECCC-CCeeeeeeeccCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCCE
Confidence 334334443 46789998876 433333344212222333444556665543 4567788888877654
No 205
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=31.70 E-value=3.4e+02 Score=25.68 Aligned_cols=183 Identities=9% Similarity=0.032 Sum_probs=92.9
Q ss_pred eEEEeecCceEEEEecchhhhh-cCCCCcccCCcCCceeeeeEEeecCCCCCeEEEEEEEEecCccccccCCCceEEEEE
Q 045559 99 LFIMFIGGDEIALYNHATRDLK-FLPKLTLIDNLESIYTIMFGLGLDPKCNYYKLVYIVTYHDSELGKVLNDSRQVFIYS 177 (335)
Q Consensus 99 Ll~~~~~~~~~~V~NP~T~~~~-~LP~~~~~~~~~~~~~~~~~l~~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~~~vys 177 (335)
.|++.. ...+...+..+.+.. .+|..... ...++.||+..+. |+.. . ...-.+..++
T Consensus 8 ~Ll~s~-~~~I~~i~l~~~~~~~~~~~~~~~--------~~~~l~~d~~~~~--lywt-D----------~~~~~I~r~~ 65 (628)
T 4a0p_A 8 FLLFSR-RADIRRISLETNNNNVAIPLTGVK--------EASALDFDVTDNR--IYWT-D----------ISLKTISRAF 65 (628)
T ss_dssp EEEEEE-TTEEEEEESSCTTCEEECCCCSCS--------CEEEEEEETTTTE--EEEE-E----------TTTTEEEEEE
T ss_pred EEEEEe-CCcEEEEECCCCCcceEEEcCCCC--------ceEEEEEECCCCE--EEEE-E----------CCCCeEEEEE
Confidence 445554 666667766655432 23332211 1578888886553 3222 1 1133556666
Q ss_pred cCCCcceecCcccccccccCCCceeeee---cceEEEEeecCCCCCccCceEEEEEECCccceeeecCCCccccCCCCee
Q 045559 178 FSDNSWRNFQGFEFGMYDLDEVLDCTYH---NGACHWLVPFGAFHPLCCHYVILSFDMSDEVFEEILGPNCLLEISPKHT 254 (335)
Q Consensus 178 s~~~~W~~~~~~p~~~~~~~~~~~~v~~---~G~~ywl~~~~~~~~~~~~~~i~~fD~~~e~~~~i~~P~~~~~~~~~~~ 254 (335)
..+...+.+... ... .+ .++.+ +|.+||.... ...|.++|+....-..+-. .... ...
T Consensus 66 ~~g~~~~~v~~~--g~~-~P---~GlAvD~~~~~LY~tD~~--------~~~I~v~~~dG~~~~~l~~-~~l~----~P~ 126 (628)
T 4a0p_A 66 MNGSALEHVVEF--GLD-YP---EGMAVDWLGKNLYWADTG--------TNRIEVSKLDGQHRQVLVW-KDLD----SPR 126 (628)
T ss_dssp TTSCSCEEEECS--SCS-CC---CEEEEETTTTEEEEEETT--------TTEEEEEETTSTTCEEEEC-SSCC----CEE
T ss_pred CCCCCcEEEEeC--CCC-Cc---ceEEEEeCCCEEEEEECC--------CCEEEEEecCCCcEEEEEe-CCCC----Ccc
Confidence 665544443211 111 11 24444 5899997553 3479999987654333311 1111 223
Q ss_pred EEEEe--CCeEEEEEecCCCCEEEEEEECCCCceeEEEEeccCCceeeeEEEee---CCEEEEEec-CCeEEEEeCCCCc
Q 045559 255 VFGLY--NDSLSFLVFDERESCFDIWTMKERYHWTKEFSTTPILAVDAPIGFWK---NDTFFIRSN-TEELLLYDPNSEE 328 (335)
Q Consensus 255 ~l~~~--~g~L~~~~~~~~~~~~~IW~l~~~~~W~~~~~i~~~~~~~~~~~~~~---~~~il~~~~-~~~l~~yd~~~~~ 328 (335)
.|+.- +|.|+...... ...|...-|+. .. .. .+ ...+..|.++.- ++.++.... ...+.++|+.++.
T Consensus 127 ~iavdp~~G~lY~tD~g~-~~~I~r~~~dG-~~-~~--~l--~~~~~~P~GlalD~~~~~LY~aD~~~~~I~~~d~dG~~ 199 (628)
T 4a0p_A 127 ALALDPAEGFMYWTEWGG-KPKIDRAAMDG-SE-RT--TL--VPNVGRANGLTIDYAKRRLYWTDLDTNLIESSNMLGLN 199 (628)
T ss_dssp EEEEETTTTEEEEEECSS-SCEEEEEETTS-CS-CE--EE--ECSCSSEEEEEEETTTTEEEEEETTTTEEEEEETTSCS
T ss_pred cEEEccCCCeEEEeCCCC-CCEEEEEeCCC-Cc-eE--EE--ECCCCCcceEEEccccCEEEEEECCCCEEEEEcCCCCc
Confidence 44544 78888876432 34444444444 21 11 11 123456666643 355665543 5678888887654
Q ss_pred e
Q 045559 329 I 329 (335)
Q Consensus 329 ~ 329 (335)
.
T Consensus 200 ~ 200 (628)
T 4a0p_A 200 R 200 (628)
T ss_dssp C
T ss_pred e
Confidence 3
No 206
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=31.19 E-value=2.3e+02 Score=23.63 Aligned_cols=147 Identities=12% Similarity=0.078 Sum_probs=73.2
Q ss_pred ceEEEEecchhhhhcCCCCcccCCcCCceeeeeEEeecCCCCCeEEEEEEEEecCccccccCCCceEEEEEcCCCc-c-e
Q 045559 107 DEIALYNHATRDLKFLPKLTLIDNLESIYTIMFGLGLDPKCNYYKLVYIVTYHDSELGKVLNDSRQVFIYSFSDNS-W-R 184 (335)
Q Consensus 107 ~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~l~~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~~~vyss~~~~-W-~ 184 (335)
..++++||.|++....-... ......++.+|+..+ ++ +.. .....+.+|+..+.. . .
T Consensus 69 ~~i~~~d~~~g~~~~~~~~~-------~~~~p~gia~d~~g~---l~-v~d----------~~~~~v~~~~~~g~~~~~~ 127 (329)
T 3fvz_A 69 DTILVIDPNNAEILQSSGKN-------LFYLPHGLSIDTDGN---YW-VTD----------VALHQVFKLDPHSKEGPLL 127 (329)
T ss_dssp CCEEEECTTTCCEEEEECTT-------TCSSEEEEEECTTSC---EE-EEE----------TTTTEEEEECTTCSSCCSE
T ss_pred CcEEEEECCCCeEEeccCCC-------ccCCceEEEECCCCC---EE-EEE----------CCCCEEEEEeCCCCeEEEE
Confidence 36899999988865321111 111145777786543 22 211 123457777765431 1 1
Q ss_pred ecCcc--c---ccccccCCCceeeee---cceEEEEeecCCCCCccCceEEEEEECCccceeeecCCCcc-----ccCCC
Q 045559 185 NFQGF--E---FGMYDLDEVLDCTYH---NGACHWLVPFGAFHPLCCHYVILSFDMSDEVFEEILGPNCL-----LEISP 251 (335)
Q Consensus 185 ~~~~~--p---~~~~~~~~~~~~v~~---~G~~ywl~~~~~~~~~~~~~~i~~fD~~~e~~~~i~~P~~~-----~~~~~ 251 (335)
.+... + ......+ .++.+ +|.+|+..... ...|..||...+....+..+... ... .
T Consensus 128 ~~~~~~~~g~~~~~~~~P---~~ia~~~~~g~lyv~d~~~-------~~~I~~~~~~g~~~~~~~~~g~~~~~~~~~~-~ 196 (329)
T 3fvz_A 128 ILGRSMQPGSDQNHFCQP---TDVAVEPSTGAVFVSDGYC-------NSRIVQFSPSGKFVTQWGEESSGSSPRPGQF-S 196 (329)
T ss_dssp EESBTTBCCCSTTCCSSE---EEEEECTTTCCEEEEECSS-------CCEEEEECTTSCEEEEECEECCSSSCCTTEE-S
T ss_pred EecccCCCCCCccccCCC---cEEEEeCCCCeEEEEeCCC-------CCeEEEEcCCCCEEEEeccCCCCCCCCCccc-C
Confidence 11110 0 0011112 24444 57888876422 34799999665555544322111 000 0
Q ss_pred CeeEEEEe-C-CeEEEEEecCCCCEEEEEEECCCCceeE
Q 045559 252 KHTVFGLY-N-DSLSFLVFDERESCFDIWTMKERYHWTK 288 (335)
Q Consensus 252 ~~~~l~~~-~-g~L~~~~~~~~~~~~~IW~l~~~~~W~~ 288 (335)
....++.. + |.|++.... ...+.+|-.+. .....
T Consensus 197 ~p~gia~d~~~g~l~v~d~~--~~~I~~~~~~~-G~~~~ 232 (329)
T 3fvz_A 197 VPHSLALVPHLDQLCVADRE--NGRIQCFKTDT-KEFVR 232 (329)
T ss_dssp CEEEEEEETTTTEEEEEETT--TTEEEEEETTT-CCEEE
T ss_pred CCcEEEEECCCCEEEEEECC--CCEEEEEECCC-CcEEE
Confidence 12234443 3 788888765 57888888773 44433
No 207
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=31.05 E-value=2.3e+02 Score=23.67 Aligned_cols=187 Identities=8% Similarity=-0.064 Sum_probs=91.0
Q ss_pred ccceEEEee-cCceEEEEecch----hhhhc-CCCCcccCCcCCceeeeeEEeecCCCCCeEEEEEEEEecCccccccCC
Q 045559 96 FEGLFIMFI-GGDEIALYNHAT----RDLKF-LPKLTLIDNLESIYTIMFGLGLDPKCNYYKLVYIVTYHDSELGKVLND 169 (335)
Q Consensus 96 ~~GLl~~~~-~~~~~~V~NP~T----~~~~~-LP~~~~~~~~~~~~~~~~~l~~d~~~~~ykVv~~~~~~~~~~~~~~~~ 169 (335)
.+|.|.... ....++..++.+ ..... ++.. .. ...++++|+..+... .. . ..
T Consensus 40 ~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~-~~--------~p~glavd~~~~~ly--~~-d----------~~ 97 (316)
T 1ijq_A 40 ASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRD-IQ--------APDGLAVDWIHSNIY--WT-D----------SV 97 (316)
T ss_dssp TTTEEEEEETTTTEEEEEEC--------CEEEECSS-CS--------CCCEEEEETTTTEEE--EE-E----------TT
T ss_pred CCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCC-CC--------CcCEEEEeecCCeEE--EE-E----------CC
Confidence 456555554 356778888876 22121 2111 00 135777776554322 22 1 12
Q ss_pred CceEEEEEcCCCcceecCcccccccccCCCceeeee---cceEEEEeecCCCCCccCceEEEEEECCccceeee-cCCCc
Q 045559 170 SRQVFIYSFSDNSWRNFQGFEFGMYDLDEVLDCTYH---NGACHWLVPFGAFHPLCCHYVILSFDMSDEVFEEI-LGPNC 245 (335)
Q Consensus 170 ~~~~~vyss~~~~W~~~~~~p~~~~~~~~~~~~v~~---~G~~ywl~~~~~~~~~~~~~~i~~fD~~~e~~~~i-~~P~~ 245 (335)
...++++++.+..=+.+... .. ..+ .++.+ +|.+||..... ...|.++|+....-..+ ...
T Consensus 98 ~~~I~~~~~~g~~~~~~~~~--~~-~~P---~~iavdp~~g~ly~~d~~~-------~~~I~~~~~dG~~~~~~~~~~-- 162 (316)
T 1ijq_A 98 LGTVSVADTKGVKRKTLFRE--NG-SKP---RAIVVDPVHGFMYWTDWGT-------PAKIKKGGLNGVDIYSLVTEN-- 162 (316)
T ss_dssp TTEEEEEETTSSSEEEEEEC--TT-CCE---EEEEEETTTTEEEEEECSS-------SCEEEEEETTSCCEEEEECSS--
T ss_pred CCEEEEEeCCCCceEEEEEC--CC-CCc---ceEEeCCCCCEEEEEccCC-------CCeEEEEcCCCCCeEEEEECC--
Confidence 34677777765432222110 01 111 23333 68999986532 24799999865543333 211
Q ss_pred cccCCCCeeEEEEe--CCeEEEEEecCCCCEEEEEEECCCCceeEEEEeccCCceeeeEEEee-CCEEEEEe-cCCeEEE
Q 045559 246 LLEISPKHTVFGLY--NDSLSFLVFDERESCFDIWTMKERYHWTKEFSTTPILAVDAPIGFWK-NDTFFIRS-NTEELLL 321 (335)
Q Consensus 246 ~~~~~~~~~~l~~~--~g~L~~~~~~~~~~~~~IW~l~~~~~W~~~~~i~~~~~~~~~~~~~~-~~~il~~~-~~~~l~~ 321 (335)
.. ....|+.. +++|+++... ...|...-++. .-.+.. +.....+..|.++.- ++.++... ..++|..
T Consensus 163 ~~----~P~gla~d~~~~~lY~~D~~--~~~I~~~d~dg--~~~~~~-~~~~~~~~~P~giav~~~~ly~~d~~~~~V~~ 233 (316)
T 1ijq_A 163 IQ----WPNGITLDLLSGRLYWVDSK--LHSISSIDVNG--GNRKTI-LEDEKRLAHPFSLAVFEDKVFWTDIINEAIFS 233 (316)
T ss_dssp CS----CEEEEEEETTTTEEEEEETT--TTEEEEEETTS--CSCEEE-EECTTTTSSEEEEEEETTEEEEEETTTTEEEE
T ss_pred CC----CceEEEEeccCCEEEEEECC--CCeEEEEecCC--CceEEE-eecCCccCCcEEEEEECCEEEEEECCCCeEEE
Confidence 11 12234444 6778888765 45555544443 112221 111123345666543 45666654 4678999
Q ss_pred EeCCCCc
Q 045559 322 YDPNSEE 328 (335)
Q Consensus 322 yd~~~~~ 328 (335)
+|+.+++
T Consensus 234 ~~~~~g~ 240 (316)
T 1ijq_A 234 ANRLTGS 240 (316)
T ss_dssp EETTTCC
T ss_pred EeCCCCc
Confidence 9986554
No 208
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=30.20 E-value=2.4e+02 Score=23.48 Aligned_cols=93 Identities=14% Similarity=0.222 Sum_probs=50.7
Q ss_pred EEEEEECCccceee-ecCCCccccCCCCeeEEEEe-CCeEEEEEecCCCCEEEEEEECCCCceeEEEEeccCCceeeeEE
Q 045559 226 VILSFDMSDEVFEE-ILGPNCLLEISPKHTVFGLY-NDSLSFLVFDERESCFDIWTMKERYHWTKEFSTTPILAVDAPIG 303 (335)
Q Consensus 226 ~i~~fD~~~e~~~~-i~~P~~~~~~~~~~~~l~~~-~g~L~~~~~~~~~~~~~IW~l~~~~~W~~~~~i~~~~~~~~~~~ 303 (335)
.|..+|+.+.+... +..... .-..+... +|.+.+.... ...+.||-++. .. ...++........-+.
T Consensus 187 ~i~iwd~~~~~~~~~~~~h~~------~v~~l~~spd~~~l~s~s~--dg~i~iwd~~~-~~--~~~~~~~h~~~v~~~~ 255 (321)
T 3ow8_A 187 IINIFDIATGKLLHTLEGHAM------PIRSLTFSPDSQLLVTASD--DGYIKIYDVQH-AN--LAGTLSGHASWVLNVA 255 (321)
T ss_dssp CEEEEETTTTEEEEEECCCSS------CCCEEEECTTSCEEEEECT--TSCEEEEETTT-CC--EEEEECCCSSCEEEEE
T ss_pred eEEEEECCCCcEEEEEcccCC------ceeEEEEcCCCCEEEEEcC--CCeEEEEECCC-cc--eeEEEcCCCCceEEEE
Confidence 57778887664322 222111 11123333 5554444443 56799998876 32 3334422233334455
Q ss_pred EeeCCEEEE-EecCCeEEEEeCCCCce
Q 045559 304 FWKNDTFFI-RSNTEELLLYDPNSEEI 329 (335)
Q Consensus 304 ~~~~~~il~-~~~~~~l~~yd~~~~~~ 329 (335)
+.++++.++ ...++.+..||+++++.
T Consensus 256 ~sp~~~~l~s~s~D~~v~iwd~~~~~~ 282 (321)
T 3ow8_A 256 FCPDDTHFVSSSSDKSVKVWDVGTRTC 282 (321)
T ss_dssp ECTTSSEEEEEETTSCEEEEETTTTEE
T ss_pred ECCCCCEEEEEeCCCcEEEEeCCCCEE
Confidence 666777554 45577899999987664
No 209
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=29.83 E-value=2.6e+02 Score=23.72 Aligned_cols=73 Identities=7% Similarity=0.045 Sum_probs=39.1
Q ss_pred eCCe-EEEEEecCC---CCEEEEEEECCCCceeEEEE-eccCCceeeeEEEee---CCEEEEEe-c-CCeEEEEeCCCCc
Q 045559 259 YNDS-LSFLVFDER---ESCFDIWTMKERYHWTKEFS-TTPILAVDAPIGFWK---NDTFFIRS-N-TEELLLYDPNSEE 328 (335)
Q Consensus 259 ~~g~-L~~~~~~~~---~~~~~IW~l~~~~~W~~~~~-i~~~~~~~~~~~~~~---~~~il~~~-~-~~~l~~yd~~~~~ 328 (335)
-+|+ |++...... ...+.||.++....-.+... +.....-..-+++.+ +|+.++.. . ++.+.+|+.+++.
T Consensus 264 pdG~~l~v~~~~~~~~~~~~i~v~~~~~~g~~~~~~~~~~~~~~~~~~~a~sp~~~dg~~l~v~~~~~~~v~v~~~~~~~ 343 (365)
T 1jof_A 264 FSGKYMFASSRANKFELQGYIAGFKLRDCGSIEKQLFLSPTPTSGGHSNAVSPCPWSDEWMAITDDQEGWLEIYRWKDEF 343 (365)
T ss_dssp TTSSEEEEEEEESSTTSCCEEEEEEECTTSCEEEEEEEEECSSCCTTCCCEEECTTCTTEEEEECSSSCEEEEEEEETTE
T ss_pred CCCCEEEEECCCCCCCCCCeEEEEEECCCCCEEEeeeeeecCCCCcccceecCCCcCCCEEEEEEcCCCeEEEEEEchhh
Confidence 3676 665554421 12899999974244333222 311111223345556 67754443 3 4678888887776
Q ss_pred eee
Q 045559 329 IID 331 (335)
Q Consensus 329 ~~~ 331 (335)
++.
T Consensus 344 l~~ 346 (365)
T 1jof_A 344 LHR 346 (365)
T ss_dssp EEE
T ss_pred Cce
Confidence 654
No 210
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=29.75 E-value=4.6e+02 Score=26.65 Aligned_cols=65 Identities=9% Similarity=0.007 Sum_probs=36.4
Q ss_pred CCeEEEEEecCCCCEEEEEEECCCCceeEEEEeccCCceeeeEEEeeCCEEEE-EecCCeEEEEeCCCCce
Q 045559 260 NDSLSFLVFDERESCFDIWTMKERYHWTKEFSTTPILAVDAPIGFWKNDTFFI-RSNTEELLLYDPNSEEI 329 (335)
Q Consensus 260 ~g~L~~~~~~~~~~~~~IW~l~~~~~W~~~~~i~~~~~~~~~~~~~~~~~il~-~~~~~~l~~yd~~~~~~ 329 (335)
+|+..++.. .+.+.+|-+.. ......... ....-..-+.+.+++.+++ ...++.+..||.++++.
T Consensus 809 dg~~l~~~~---~~~v~~~d~~~-~~~~~~~~~-~~~~~v~~~~~sp~~~~l~~~~~dg~v~vwd~~~~~~ 874 (1249)
T 3sfz_A 809 DGDKIIVAA---KNKVLLFDIHT-SGLLAEIHT-GHHSTIQYCDFSPYDHLAVIALSQYCVELWNIDSRLK 874 (1249)
T ss_dssp TSSEEEEEE---TTEEEEEETTT-CCEEEEEEC-SSSSCCCEEEECSSTTEEEEECSSSCEEEEETTTTEE
T ss_pred CCCEEEEEc---CCcEEEEEecC-CCceeEEcC-CCCCceEEEEEcCCCCEEEEEeCCCeEEEEEcCCCce
Confidence 555444443 36788888776 433333222 2233344455566777544 44566788888877653
No 211
>1rrp_B Nuclear pore complex protein NUP358; complex (small GTPase/nuclear protein), small GTPase, nuclear transport; HET: GNP; 2.96A {Homo sapiens} SCOP: b.55.1.3
Probab=29.47 E-value=28 Score=25.82 Aligned_cols=26 Identities=19% Similarity=0.204 Sum_probs=19.2
Q ss_pred EEEEEecCCeEEEEeCCCCceeecccC
Q 045559 309 TFFIRSNTEELLLYDPNSEEIIDFQHK 335 (335)
Q Consensus 309 ~il~~~~~~~l~~yd~~~~~~~~v~~~ 335 (335)
+.++..+. +|+.||.++++|++-++|
T Consensus 22 ~~lf~~ra-KL~~~~~~~~~WkerG~G 47 (134)
T 1rrp_B 22 EEFFCNRA-KLFRFDVESKEWKERGIG 47 (134)
T ss_dssp EEEEEEEE-EEEEECSSSSCEEEEEEE
T ss_pred EEEEEEEE-EEEEEcccCCCcccCcEE
Confidence 36666665 799998888889887654
No 212
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=29.15 E-value=2.9e+02 Score=24.08 Aligned_cols=107 Identities=14% Similarity=0.024 Sum_probs=0.0
Q ss_pred cceEEEEeecCCCCCccCceEEEEEECCccceeeec--------------CCCccccCCCCeeEEEEeCCeEEEEEecCC
Q 045559 206 NGACHWLVPFGAFHPLCCHYVILSFDMSDEVFEEIL--------------GPNCLLEISPKHTVFGLYNDSLSFLVFDER 271 (335)
Q Consensus 206 ~G~~ywl~~~~~~~~~~~~~~i~~fD~~~e~~~~i~--------------~P~~~~~~~~~~~~l~~~~g~L~~~~~~~~ 271 (335)
+|.+||... + .+..+|+.+..-..+. .|... ....+..-++++++....
T Consensus 222 ~~~~~~vs~-~---------~V~viD~~~~~~~v~~~~~~~~~~~~~~~~~p~g~-----~~v~~s~dg~~lyV~~~~-- 284 (368)
T 1mda_H 222 PGMLVWAVA-S---------SILQGDIPAAGATMKAAIDGNESGRKADNFRSAGF-----QMVAKLKNTDGIMILTVE-- 284 (368)
T ss_dssp TTEEEECBS-S---------CCEEEECCSSCCEEECCCCSSCTHHHHTTEEECSS-----SCEEEETTTTEEEEEEEE--
T ss_pred CCEEEEEcC-C---------EEEEEECCCCcceEEEEEEeccccccccccccCcc-----eeeEEcCCCCEEEEEecc--
Q ss_pred C-C-----EEEEEEECCCCceeEEEEeccCCceeeeEEEeeCCE-EEEEec--CCeEEEEeCCCCceee
Q 045559 272 E-S-----CFDIWTMKERYHWTKEFSTTPILAVDAPIGFWKNDT-FFIRSN--TEELLLYDPNSEEIID 331 (335)
Q Consensus 272 ~-~-----~~~IW~l~~~~~W~~~~~i~~~~~~~~~~~~~~~~~-il~~~~--~~~l~~yd~~~~~~~~ 331 (335)
. . .=.+.+.|- .....+.+| +......-+.+..||+ +++..+ ++.|-++|+++.+..+
T Consensus 285 ~~~~~~~~~~~~~ViD~-~t~~vv~~i-~vg~~p~gi~~s~Dg~~l~va~~~~~~~VsVID~~t~kvv~ 351 (368)
T 1mda_H 285 HSRSCLAAAENTSSVTA-SVGQTSGPI-SNGHDSDAIIAAQDGASDNYANSAGTEVLDIYDAASDQDQS 351 (368)
T ss_dssp CSSCTTSCEEEEEEEES-SSCCEEECC-EEEEEECEEEECCSSSCEEEEEETTTTEEEEEESSSCEEEE
T ss_pred ccCcccccCCCEEEEEC-CCCeEEEEE-ECCCCcceEEECCCCCEEEEEccCCCCeEEEEECCCCcEEE
No 213
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=28.90 E-value=2.4e+02 Score=23.01 Aligned_cols=94 Identities=12% Similarity=0.053 Sum_probs=50.1
Q ss_pred EEEEEECCccceeeecCCCccccCCCCeeEEEEe-CCeEEEEEecCCCCEEEEEEECCCCceeEEEEec-cCCceeeeEE
Q 045559 226 VILSFDMSDEVFEEILGPNCLLEISPKHTVFGLY-NDSLSFLVFDERESCFDIWTMKERYHWTKEFSTT-PILAVDAPIG 303 (335)
Q Consensus 226 ~i~~fD~~~e~~~~i~~P~~~~~~~~~~~~l~~~-~g~L~~~~~~~~~~~~~IW~l~~~~~W~~~~~i~-~~~~~~~~~~ 303 (335)
.|..+|+.+.+.... ++.... .-..+... +|.+.+.... ...+.+|-+.. .. ....+. ........+.
T Consensus 130 ~i~iwd~~~~~~~~~-~~~~~~----~v~~~~~~~~~~~l~~~~~--d~~i~~wd~~~-~~--~~~~~~~~~~~~~~~~~ 199 (312)
T 4ery_A 130 SVRIWDVKTGKCLKT-LPAHSD----PVSAVHFNRDGSLIVSSSY--DGLCRIWDTAS-GQ--CLKTLIDDDNPPVSFVK 199 (312)
T ss_dssp CEEEEETTTCCEEEE-ECCCSS----CEEEEEECTTSSEEEEEET--TSCEEEEETTT-CC--EEEEECCSSCCCEEEEE
T ss_pred cEEEEECCCCEEEEE-ecCCCC----cEEEEEEcCCCCEEEEEeC--CCcEEEEECCC-Cc--eeeEEeccCCCceEEEE
Confidence 577788876543222 111110 11123322 5555555544 46799998876 32 222331 1122234455
Q ss_pred EeeCCEEEE-EecCCeEEEEeCCCCce
Q 045559 304 FWKNDTFFI-RSNTEELLLYDPNSEEI 329 (335)
Q Consensus 304 ~~~~~~il~-~~~~~~l~~yd~~~~~~ 329 (335)
+.++++.++ ...++.+..||+++++.
T Consensus 200 ~~~~~~~l~~~~~d~~i~iwd~~~~~~ 226 (312)
T 4ery_A 200 FSPNGKYILAATLDNTLKLWDYSKGKC 226 (312)
T ss_dssp ECTTSSEEEEEETTTEEEEEETTTTEE
T ss_pred ECCCCCEEEEEcCCCeEEEEECCCCcE
Confidence 666777554 45577899999987764
No 214
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=28.57 E-value=2.6e+02 Score=23.36 Aligned_cols=68 Identities=9% Similarity=0.002 Sum_probs=41.5
Q ss_pred CCeEEEEEecCCCCEEEEEEECC-CCceeEEEEeccCCceeeeEEEeeCCEEEEEecCCeEEEEeCCCCce
Q 045559 260 NDSLSFLVFDERESCFDIWTMKE-RYHWTKEFSTTPILAVDAPIGFWKNDTFFIRSNTEELLLYDPNSEEI 329 (335)
Q Consensus 260 ~g~L~~~~~~~~~~~~~IW~l~~-~~~W~~~~~i~~~~~~~~~~~~~~~~~il~~~~~~~l~~yd~~~~~~ 329 (335)
+|.+.+.+.. ...+.||-++. .........+........-+.+.+++.++....++.+..||+++++.
T Consensus 108 ~~~~l~s~~~--d~~v~iw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~l~s~s~d~~i~~wd~~~~~~ 176 (340)
T 1got_B 108 SGNYVACGGL--DNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCALWDIETGQQ 176 (340)
T ss_dssp TSSEEEEEET--TCEEEEEETTTCSBSCEEEEEEECCSSCEEEEEEEETTEEEEEETTSCEEEEETTTTEE
T ss_pred CCCEEEEEeC--CCeEEEEECccCCCcceeEEEecCCCccEEEEEECCCCcEEEEECCCcEEEEECCCCcE
Confidence 4554444444 57899999886 23333333332233333444555677777777788899999988764
No 215
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=28.30 E-value=3.7e+02 Score=25.06 Aligned_cols=115 Identities=15% Similarity=0.252 Sum_probs=58.9
Q ss_pred eeeeecceEEEEeecCCCCCccCceEEEEEECC--ccceeee-cCCCcccc-CCCCeeEEEEeCCeEEEEEecCCCCEEE
Q 045559 201 DCTYHNGACHWLVPFGAFHPLCCHYVILSFDMS--DEVFEEI-LGPNCLLE-ISPKHTVFGLYNDSLSFLVFDERESCFD 276 (335)
Q Consensus 201 ~~v~~~G~~ywl~~~~~~~~~~~~~~i~~fD~~--~e~~~~i-~~P~~~~~-~~~~~~~l~~~~g~L~~~~~~~~~~~~~ 276 (335)
.+++.+|.+|..+..+ .+.++|.+ ++.|+.- ..|..... .......++..+|.+++...+ . .
T Consensus 63 ~P~v~~g~vyv~~~~~---------~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~g~a~~~~~v~~~t~d---g--~ 128 (582)
T 1flg_A 63 QAIVSDGVIYVTASYS---------RLFALDAKTGKRLWTYNHRLPDDIRPCCDVVNRGAAIYGDKVFFGTLD---A--S 128 (582)
T ss_dssp CCEEETTEEEEEETTT---------EEEEEESSSCCEEEEEECCCCTTCCCSSCSCCCCCEEETTEEEEEETT---T--E
T ss_pred ccEEECCEEEEEcCCC---------CEEEEECCCCcEEEEEcCCCCcccccccccCCCccEEECCEEEEEeCC---C--E
Confidence 3788999999877532 49999975 4456543 22321110 000112234567777665432 2 2
Q ss_pred EEEECC---CCceeEEEEecc--CCceeeeEEEee--CC--EEEEEec------CCeEEEEeCCCCce
Q 045559 277 IWTMKE---RYHWTKEFSTTP--ILAVDAPIGFWK--ND--TFFIRSN------TEELLLYDPNSEEI 329 (335)
Q Consensus 277 IW~l~~---~~~W~~~~~i~~--~~~~~~~~~~~~--~~--~il~~~~------~~~l~~yd~~~~~~ 329 (335)
|..++. ...|.....-.. ......|+.+.. +| .+++... +..|+.||++|++.
T Consensus 129 l~AlD~~TG~~~W~~~~~~~~~~~~~~~sP~v~~~~~~G~~~v~vg~~~~e~~~~g~v~alD~~tG~~ 196 (582)
T 1flg_A 129 VVALNKNTGKVVWKKKFADHGAGYTMTGAPTIVKDGKTGKVLLIHGSSGDEFGVVGRLFARDPDTGEE 196 (582)
T ss_dssp EEEEESSSCCEEEEEECSCGGGTCBCCSCCEEEECTTTCCEEEEECCBCGGGCCBCEEEEECTTTCCE
T ss_pred EEEEECCCCCEEeeecCCCCCcCcccccCCEEeCCCcCCcEEEEEeccccccCCCCEEEEEECCCCCE
Confidence 445543 456765321100 011235554432 23 3444321 46799999998764
No 216
>1i2h_A PSD-ZIP45(homer-1C/VESL-1L); enabled VAsp homology 1 domain, signaling protein; 1.80A {Rattus norvegicus} SCOP: b.55.1.4
Probab=27.74 E-value=66 Score=24.87 Aligned_cols=41 Identities=12% Similarity=0.142 Sum_probs=28.2
Q ss_pred CceEEEEecchh-hhhcCCCCcccCCcCCceeeeeEEeecCCCCCeEEEEEE
Q 045559 106 GDEIALYNHATR-DLKFLPKLTLIDNLESIYTIMFGLGLDPKCNYYKLVYIV 156 (335)
Q Consensus 106 ~~~~~V~NP~T~-~~~~LP~~~~~~~~~~~~~~~~~l~~d~~~~~ykVv~~~ 156 (335)
...++++||.|+ .|+..-.... ...+-+|...+.|+|+.+.
T Consensus 15 rA~Vm~~D~~tk~~WvP~g~~~~----------~V~i~~d~~rnsyRIvg~~ 56 (168)
T 1i2h_A 15 RAHVFQIDPNTKKNWVPTSKHAV----------TVSYFYDSTRNVYRIISLD 56 (168)
T ss_dssp EEEEEEECTTSSCCSEESCSSCE----------EEEEEEETTTTEEEEEEEE
T ss_pred EEEEEEECCCCCCceeecCCCCe----------EEEEEEcCCCCEEEEEEcc
Confidence 456889999997 8865433321 3455578888889998863
No 217
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=27.69 E-value=3e+02 Score=23.88 Aligned_cols=95 Identities=15% Similarity=0.201 Sum_probs=51.8
Q ss_pred EEEEEECCccce-eeecCCCccccCCCCeeEEEEeCCeEEEEEecCCCCEEEEEEECCCCceeEEEEe---ccCCceeee
Q 045559 226 VILSFDMSDEVF-EEILGPNCLLEISPKHTVFGLYNDSLSFLVFDERESCFDIWTMKERYHWTKEFST---TPILAVDAP 301 (335)
Q Consensus 226 ~i~~fD~~~e~~-~~i~~P~~~~~~~~~~~~l~~~~g~L~~~~~~~~~~~~~IW~l~~~~~W~~~~~i---~~~~~~~~~ 301 (335)
.|..+|+.+.+. ..+..+.... ....-...++.+.+.+.. .+.+.||-++. .+....... ........-
T Consensus 340 ~i~vwd~~~~~~~~~~~~~~~~~----~~v~~~~~~~~~l~s~~~--dg~v~iwd~~~-~~~~~~~~~~~~~~~~~~v~~ 412 (445)
T 2ovr_B 340 TVKIWDIKTGQCLQTLQGPNKHQ----SAVTCLQFNKNFVITSSD--DGTVKLWDLKT-GEFIRNLVTLESGGSGGVVWR 412 (445)
T ss_dssp CEEEEETTTCCEEEEECSTTSCS----SCEEEEEECSSEEEEEET--TSEEEEEETTT-CCEEEEEEECTTGGGTCEEEE
T ss_pred eEEEEECCCCcEEEEEccCCCCC----CCEEEEEECCCEEEEEeC--CCeEEEEECCC-CceeeeeeccccCCCCceEEE
Confidence 688899876543 3334433221 122223335665555544 57899999886 443443321 112223444
Q ss_pred EEEeeCCEEEEEe-cCC----eEEEEeCCCC
Q 045559 302 IGFWKNDTFFIRS-NTE----ELLLYDPNSE 327 (335)
Q Consensus 302 ~~~~~~~~il~~~-~~~----~l~~yd~~~~ 327 (335)
+.+.+++.++... .++ ++.+||.+.+
T Consensus 413 ~~~s~~~~~la~~~~dg~~~~~l~v~df~~~ 443 (445)
T 2ovr_B 413 IRASNTKLVCAVGSRNGTEETKLLVLDFDVD 443 (445)
T ss_dssp EEECSSEEEEEEECSSSSSCCEEEEEECCCC
T ss_pred EEecCCEEEEEEcccCCCCccEEEEEECCCC
Confidence 5666677766554 333 4999998754
No 218
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=27.63 E-value=3e+02 Score=23.76 Aligned_cols=65 Identities=11% Similarity=0.052 Sum_probs=40.0
Q ss_pred CCeEEEEEecCCCCEEEEEEECCCCceeEEEEec-c-CCceeeeEEEeeCCEEEE-EecCCeEEEEeCCCCce
Q 045559 260 NDSLSFLVFDERESCFDIWTMKERYHWTKEFSTT-P-ILAVDAPIGFWKNDTFFI-RSNTEELLLYDPNSEEI 329 (335)
Q Consensus 260 ~g~L~~~~~~~~~~~~~IW~l~~~~~W~~~~~i~-~-~~~~~~~~~~~~~~~il~-~~~~~~l~~yd~~~~~~ 329 (335)
+|.+.+.... ...+.+|-++. .. ...++. + ......-+.+.++++.++ ...++.+..||+++++.
T Consensus 181 ~~~~l~~~~~--d~~i~iwd~~~-~~--~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~ 248 (437)
T 3gre_A 181 EKSLLVALTN--LSRVIIFDIRT-LE--RLQIIENSPRHGAVSSICIDEECCVLILGTTRGIIDIWDIRFNVL 248 (437)
T ss_dssp SCEEEEEEET--TSEEEEEETTT-CC--EEEEEECCGGGCCEEEEEECTTSCEEEEEETTSCEEEEETTTTEE
T ss_pred CCCEEEEEeC--CCeEEEEeCCC-Ce--eeEEEccCCCCCceEEEEECCCCCEEEEEcCCCeEEEEEcCCccE
Confidence 4555455544 57899998876 32 233331 1 223344556666777655 45577899999988765
No 219
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=27.07 E-value=2.8e+02 Score=23.33 Aligned_cols=98 Identities=7% Similarity=-0.020 Sum_probs=52.2
Q ss_pred eEEEEEECCccce-eeecCCCccc--------cCCCCeeEEEEe-CCeEEEEEecCCCCEEEEEEECCCCceeEEEEec-
Q 045559 225 YVILSFDMSDEVF-EEILGPNCLL--------EISPKHTVFGLY-NDSLSFLVFDERESCFDIWTMKERYHWTKEFSTT- 293 (335)
Q Consensus 225 ~~i~~fD~~~e~~-~~i~~P~~~~--------~~~~~~~~l~~~-~g~L~~~~~~~~~~~~~IW~l~~~~~W~~~~~i~- 293 (335)
..|..+|+.+.+. ..+..|.... .. ..-..+... +|++.+.... .+.+.||-++. . ....++.
T Consensus 258 g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~l~~~~~--dg~i~iwd~~~-~--~~~~~~~~ 331 (397)
T 1sq9_A 258 GCITLYETEFGERIGSLSVPTHSSQASLGEFAHS-SWVMSLSFNDSGETLCSAGW--DGKLRFWDVKT-K--ERITTLNM 331 (397)
T ss_dssp EEEEEEETTTCCEEEEECBC--------CCBSBS-SCEEEEEECSSSSEEEEEET--TSEEEEEETTT-T--EEEEEEEC
T ss_pred ceEEEEECCCCcccceeccCcccccccccccccC-CcEEEEEECCCCCEEEEEeC--CCeEEEEEcCC-C--ceeEEEec
Confidence 5788899876543 3334322100 00 012233333 5555444443 57899998876 3 3444442
Q ss_pred -----cC---------------CceeeeEEEeeCC----------EEE-EEecCCeEEEEeCCCCc
Q 045559 294 -----PI---------------LAVDAPIGFWKND----------TFF-IRSNTEELLLYDPNSEE 328 (335)
Q Consensus 294 -----~~---------------~~~~~~~~~~~~~----------~il-~~~~~~~l~~yd~~~~~ 328 (335)
.. .....-+.+.++| +++ ....++.+..||+++++
T Consensus 332 ~~~~~~~~~~~~~g~~~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~l~s~~~dg~i~iw~~~~g~ 397 (397)
T 1sq9_A 332 HCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKGWRSGMGADLNESLCCVCLDRSIRWFREAGGK 397 (397)
T ss_dssp CGGGCSSGGGCCCBCTTSCBCSSCCEEEEEEECTTTSBSTTCTTSCEEEEEETTTEEEEEEEEC--
T ss_pred ccCcccchhhhhccccccccccCCceeEEEeccccccccccccccceEEEecCCCcEEEEEcCCCC
Confidence 12 2234455666776 554 45567889999988764
No 220
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=26.72 E-value=3.6e+02 Score=24.49 Aligned_cols=98 Identities=15% Similarity=0.056 Sum_probs=56.1
Q ss_pred ceEEEEEECCccce-eeecCCCccccCCCCeeEE-EEeCCe-EEEEEe---cCCCCEEEEEEECCCCceeEEEEeccCCc
Q 045559 224 HYVILSFDMSDEVF-EEILGPNCLLEISPKHTVF-GLYNDS-LSFLVF---DERESCFDIWTMKERYHWTKEFSTTPILA 297 (335)
Q Consensus 224 ~~~i~~fD~~~e~~-~~i~~P~~~~~~~~~~~~l-~~~~g~-L~~~~~---~~~~~~~~IW~l~~~~~W~~~~~i~~~~~ 297 (335)
...|..+|+.+.+- ..++++..... .....+ ..-+|+ +++.+. ....+++.+|..++ +.|..+..|+ ++.
T Consensus 227 ~d~V~v~D~~~~k~~~tI~vg~~g~~--P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~-g~~~~~~vId-i~~ 302 (462)
T 2ece_A 227 GNRIHFWDLRKRKRIHSLTLGEENRM--ALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYED-GKWNAEKVIE-IPA 302 (462)
T ss_dssp CCEEEEEETTTTEEEEEEESCTTEEE--EEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEET-TEEEEEEEEE-ECC
T ss_pred CCEEEEEECCCCcEeeEEecCCCCCc--cceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecC-CceeEEEEEe-CCC
Confidence 35799999976533 34455421110 012222 233566 455554 01257888888886 8898887763 211
Q ss_pred -------------------eeeeEEEeeCCEEEEEec--CCeEEEEeCC
Q 045559 298 -------------------VDAPIGFWKNDTFFIRSN--TEELLLYDPN 325 (335)
Q Consensus 298 -------------------~~~~~~~~~~~~il~~~~--~~~l~~yd~~ 325 (335)
...-+.++.||++++..+ .+.|.+||..
T Consensus 303 ~~v~~~lp~~~~~f~~~~~~pa~I~lS~DGrfLYVSnrg~d~VavfdV~ 351 (462)
T 2ece_A 303 EPLEGNLPEILKPFKAVPPLVTDIDISLDDKFLYLSLWGIGEVRQYDIS 351 (462)
T ss_dssp EECCSSCCGGGGGGTEECCCCCCEEECTTSCEEEEEETTTTEEEEEECS
T ss_pred ccccccccccccccccCCCceeEEEECCCCCEEEEEeCCCCEEEEEEec
Confidence 122334567888766543 5789999974
No 221
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=26.29 E-value=3.4e+02 Score=24.01 Aligned_cols=196 Identities=7% Similarity=0.045 Sum_probs=93.8
Q ss_pred ccceEEEeecCceEEEEecchhhhhcCCCCcccCCcCCceeeeeEEeecCCCCCeEEEEEEEEecCccccccCCCceEEE
Q 045559 96 FEGLFIMFIGGDEIALYNHATRDLKFLPKLTLIDNLESIYTIMFGLGLDPKCNYYKLVYIVTYHDSELGKVLNDSRQVFI 175 (335)
Q Consensus 96 ~~GLl~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~l~~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~~~v 175 (335)
.+|.|.+......+.++++.+++...+...... ..++.+|+..+ .++.. . +.. ......+.+
T Consensus 148 ~~g~Lyv~d~~~~I~~id~~~~~v~~~~~~~~~---------P~~ia~d~~G~--~lyva-d-~~~-----~~~~~~v~~ 209 (430)
T 3tc9_A 148 NHNHLYLVGEQHPTRLIDFEKEYVSTVYSGLSK---------VRTICWTHEAD--SMIIT-N-DQN-----NNDRPNNYI 209 (430)
T ss_dssp EEEEEEEEEBTEEEEEEETTTTEEEEEECCCSC---------EEEEEECTTSS--EEEEE-E-CCS-----CTTSEEEEE
T ss_pred CCCeEEEEeCCCcEEEEECCCCEEEEEecCCCC---------cceEEEeCCCC--EEEEE-e-CCC-----CcccceEEE
Confidence 456666555336788888888776555332111 46788887544 22222 1 111 011123344
Q ss_pred EEcCCCcceecCcccccccccCCCceeeee---cceEEEEeecCCCCCccCceEEEEEECCccceeee-cCCCccccCCC
Q 045559 176 YSFSDNSWRNFQGFEFGMYDLDEVLDCTYH---NGACHWLVPFGAFHPLCCHYVILSFDMSDEVFEEI-LGPNCLLEISP 251 (335)
Q Consensus 176 yss~~~~W~~~~~~p~~~~~~~~~~~~v~~---~G~~ywl~~~~~~~~~~~~~~i~~fD~~~e~~~~i-~~P~~~~~~~~ 251 (335)
++. ++.|.....+ .....+ .++.+ +|.+|+.... ...|..||+.+.....+ ..+...
T Consensus 210 ~~~-~g~~~~~~~l--~~~~~p---~giavdp~~g~lyv~d~~--------~~~V~~~~~~~~~~~~~~~~~~~~----- 270 (430)
T 3tc9_A 210 LTR-ESGFKVITEL--TKGQNC---NGAETHPINGELYFNSWN--------AGQVFRYDFTTQETTPLFTIQDSG----- 270 (430)
T ss_dssp EEG-GGTSCSEEEE--EECSSC---CCEEECTTTCCEEEEETT--------TTEEEEEETTTTEEEEEEECSSSS-----
T ss_pred EeC-CCceeeeeee--ccCCCc---eEEEEeCCCCEEEEEECC--------CCEEEEEECCCCcEEEEEEcCCCC-----
Confidence 443 3444321111 111112 23333 6888887653 34799999987665333 443321
Q ss_pred CeeEEEEe-CCe-EEEEEecCCCCEEEEEEECC-CCceeEEEEe-cc------------CCceeeeE-EEe---------
Q 045559 252 KHTVFGLY-NDS-LSFLVFDERESCFDIWTMKE-RYHWTKEFST-TP------------ILAVDAPI-GFW--------- 305 (335)
Q Consensus 252 ~~~~l~~~-~g~-L~~~~~~~~~~~~~IW~l~~-~~~W~~~~~i-~~------------~~~~~~~~-~~~--------- 305 (335)
....++.. +|+ |+++... ...+..+-.+. ...-.....+ .. ...+..|. ++.
T Consensus 271 ~P~gia~~pdG~~lyv~d~~--~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~~gv~v~~~~y~~~ 348 (430)
T 3tc9_A 271 WEFHIQFHPSGNYAYIVVVN--QHYILRSDYDWKTKRLTTPYIVCGQQGAKDWVDGVGKKARMHAPRQGTFVKNPAYKGS 348 (430)
T ss_dssp CCEEEEECTTSSEEEEEETT--TTEEEEEEEETTTTEECCCEEEEECTTCBCCBCEEGGGCBBSSEEEEEEEECGGGTTS
T ss_pred cceeEEEcCCCCEEEEEECC--CCEEEEEeCCcccccccceEEEeccCCCCCCCCCCCcceEeCCCcceEEEcccccccc
Confidence 11223333 555 7776654 45555544443 1111111111 00 01234565 443
Q ss_pred -eCCEEEEEec-CCeEEEEeCCCCceee
Q 045559 306 -KNDTFFIRSN-TEELLLYDPNSEEIID 331 (335)
Q Consensus 306 -~~~~il~~~~-~~~l~~yd~~~~~~~~ 331 (335)
.+|.|++... .+++..+|+. +++..
T Consensus 349 D~~g~lyvaD~~n~~I~~i~~~-G~v~~ 375 (430)
T 3tc9_A 349 SDEYDFYFCDRENHCIRILTPQ-GRVTT 375 (430)
T ss_dssp SCCEEEEEEEGGGTEEEEECTT-SEEEE
T ss_pred CCCCeEEEEECCCcEEEEECCC-CcEEE
Confidence 2366777654 5689999965 45443
No 222
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=25.43 E-value=3e+02 Score=23.09 Aligned_cols=192 Identities=12% Similarity=0.004 Sum_probs=0.0
Q ss_pred CceEEEEecchhhhhcCCCCcccCCcCCceeeeeEEeecCCCCCeEEEEEEEEecCccccccCCC----ceEEEEEcCCC
Q 045559 106 GDEIALYNHATRDLKFLPKLTLIDNLESIYTIMFGLGLDPKCNYYKLVYIVTYHDSELGKVLNDS----RQVFIYSFSDN 181 (335)
Q Consensus 106 ~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~l~~d~~~~~ykVv~~~~~~~~~~~~~~~~~----~~~~vyss~~~ 181 (335)
...++++|..|++.+.+...... ...+.+.|..+..-++.. .... ..+.+++..++
T Consensus 167 ~~~l~~~d~~~g~~~~~~~~~~~---------~~~~~~sp~dg~~l~~~~-----------~~~~~~~~~~l~~~d~~~~ 226 (396)
T 3c5m_A 167 TCRLIKVDIETGELEVIHQDTAW---------LGHPIYRPFDDSTVGFCH-----------EGPHDLVDARMWLVNEDGS 226 (396)
T ss_dssp CEEEEEEETTTCCEEEEEEESSC---------EEEEEEETTEEEEEEEEE-----------CSCSSSCSCCCEEEETTSC
T ss_pred cceEEEEECCCCcEEeeccCCcc---------cccceECCCCCCEEEEEe-----------cCCCCCCCceEEEEECCCC
Q ss_pred cceecCccccc-ccccCCCceeeeecce-EEEEeecCCCCCccCceEEEEEECCccceeee-cCCCccccCCCCeeEEEE
Q 045559 182 SWRNFQGFEFG-MYDLDEVLDCTYHNGA-CHWLVPFGAFHPLCCHYVILSFDMSDEVFEEI-LGPNCLLEISPKHTVFGL 258 (335)
Q Consensus 182 ~W~~~~~~p~~-~~~~~~~~~~v~~~G~-~ywl~~~~~~~~~~~~~~i~~fD~~~e~~~~i-~~P~~~~~~~~~~~~l~~ 258 (335)
.++.+...... ..... ...-+|. +++........ ...|..+|+.+.+...+ ..|. .. ....
T Consensus 227 ~~~~l~~~~~~~~~~~~----~~spdg~~l~~~~~~~~~~----~~~l~~~d~~~g~~~~l~~~~~-------~~-~~~s 290 (396)
T 3c5m_A 227 NVRKIKEHAEGESCTHE----FWIPDGSAMAYVSYFKGQT----DRVIYKANPETLENEEVMVMPP-------CS-HLMS 290 (396)
T ss_dssp CCEESSCCCTTEEEEEE----EECTTSSCEEEEEEETTTC----CEEEEEECTTTCCEEEEEECCS-------EE-EEEE
T ss_pred ceeEeeccCCCccccce----EECCCCCEEEEEecCCCCc----cceEEEEECCCCCeEEeeeCCC-------CC-CCcc
Q ss_pred e-CCeEEEEEecCCC--------------CEEEEEEECCCCceeEEEEeccCCc---------eeeeEEEeeCCE-EEEE
Q 045559 259 Y-NDSLSFLVFDERE--------------SCFDIWTMKERYHWTKEFSTTPILA---------VDAPIGFWKNDT-FFIR 313 (335)
Q Consensus 259 ~-~g~L~~~~~~~~~--------------~~~~IW~l~~~~~W~~~~~i~~~~~---------~~~~~~~~~~~~-il~~ 313 (335)
- +|++.++...... ..+.+|-++. ....+...- +... ...-..+.++|+ |++.
T Consensus 291 ~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~~-~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~ 368 (396)
T 3c5m_A 291 NFDGSLMVGDGCDAPVDVADADSYNIENDPFLYVLNTKA-KSAQKLCKH-STSWDVLDGDRQITHPHPSFTPNDDGVLFT 368 (396)
T ss_dssp CSSSSEEEEEECCC----------CCCCCCEEEEEETTT-TBCCEEEEC-CCCCCCBTTBSSTTCCCCEECTTSSEEEEE
T ss_pred CCCCceEEEecCCcceeeccccccccCCCCcEEEEeccc-CceEEccCC-CCccccccccccCCCCCceEccCCCeEEEE
Q ss_pred ec---CCeEEEEeCCCCceeecccC
Q 045559 314 SN---TEELLLYDPNSEEIIDFQHK 335 (335)
Q Consensus 314 ~~---~~~l~~yd~~~~~~~~v~~~ 335 (335)
.. ...++.+|+.+++.+++.++
T Consensus 369 s~~~~~~~l~~~~~~~~~~~~~~~~ 393 (396)
T 3c5m_A 369 SDFEGVPAIYIADVPESYKHLEHHH 393 (396)
T ss_dssp ECTTSSCEEEEEECCTTCC------
T ss_pred ecCCCCceEEEEEEccccccccccc
No 223
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=25.42 E-value=3.2e+02 Score=23.38 Aligned_cols=197 Identities=13% Similarity=0.107 Sum_probs=88.8
Q ss_pred cccceEEEe-ecCceEEEEecchhhhhcCCCCcccCCcCCceeeeeEEeecCCCCCeEEEEEEEEecCccccccCCCceE
Q 045559 95 PFEGLFIMF-IGGDEIALYNHATRDLKFLPKLTLIDNLESIYTIMFGLGLDPKCNYYKLVYIVTYHDSELGKVLNDSRQV 173 (335)
Q Consensus 95 s~~GLl~~~-~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~l~~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~~ 173 (335)
+.+|-.++. .....+.|||..+++....-.... .....+.+.|.. .+ ++... ..-.+
T Consensus 132 s~dg~~l~s~~~d~~i~iwd~~~~~~~~~~~~h~--------~~v~~~~~~p~~-~~-l~s~s------------~d~~v 189 (393)
T 1erj_A 132 SPDGKFLATGAEDRLIRIWDIENRKIVMILQGHE--------QDIYSLDYFPSG-DK-LVSGS------------GDRTV 189 (393)
T ss_dssp CTTSSEEEEEETTSCEEEEETTTTEEEEEECCCS--------SCEEEEEECTTS-SE-EEEEE------------TTSEE
T ss_pred CCCCCEEEEEcCCCeEEEEECCCCcEEEEEccCC--------CCEEEEEEcCCC-CE-EEEec------------CCCcE
Confidence 335543333 347789999998876543211111 114566666643 32 22221 13467
Q ss_pred EEEEcCCCcceecCcccccccccCCCceeeee--cceEEEEeecCCCCCccCceEEEEEECCccceee-ecCCCccccCC
Q 045559 174 FIYSFSDNSWRNFQGFEFGMYDLDEVLDCTYH--NGACHWLVPFGAFHPLCCHYVILSFDMSDEVFEE-ILGPNCLLEIS 250 (335)
Q Consensus 174 ~vyss~~~~W~~~~~~p~~~~~~~~~~~~v~~--~G~~ywl~~~~~~~~~~~~~~i~~fD~~~e~~~~-i~~P~~~~~~~ 250 (335)
.+++.+++.-...-....... ...+. +|.+...+.. ...|-.+|+.+..... +..+......+
T Consensus 190 ~iwd~~~~~~~~~~~~~~~v~------~~~~~~~~~~~l~~~s~--------d~~v~iwd~~~~~~~~~~~~~~~~~~~h 255 (393)
T 1erj_A 190 RIWDLRTGQCSLTLSIEDGVT------TVAVSPGDGKYIAAGSL--------DRAVRVWDSETGFLVERLDSENESGTGH 255 (393)
T ss_dssp EEEETTTTEEEEEEECSSCEE------EEEECSTTCCEEEEEET--------TSCEEEEETTTCCEEEEEC------CCC
T ss_pred EEEECCCCeeEEEEEcCCCcE------EEEEECCCCCEEEEEcC--------CCcEEEEECCCCcEEEeecccccCCCCC
Confidence 888887764322110000000 01111 4443333332 2357778887664332 22221111111
Q ss_pred C-CeeEEEEe-CCeEEEEEecCCCCEEEEEEECC-CC--------ceeEEEEeccCCceeeeEEEeeCCEEEE-EecCCe
Q 045559 251 P-KHTVFGLY-NDSLSFLVFDERESCFDIWTMKE-RY--------HWTKEFSTTPILAVDAPIGFWKNDTFFI-RSNTEE 318 (335)
Q Consensus 251 ~-~~~~l~~~-~g~L~~~~~~~~~~~~~IW~l~~-~~--------~W~~~~~i~~~~~~~~~~~~~~~~~il~-~~~~~~ 318 (335)
. .-..+... +|++.+.... ...+.||-++. .. ......+.........-+++..++..++ ...++.
T Consensus 256 ~~~v~~v~~~~~g~~l~s~s~--d~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~ 333 (393)
T 1erj_A 256 KDSVYSVVFTRDGQSVVSGSL--DRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRG 333 (393)
T ss_dssp SSCEEEEEECTTSSEEEEEET--TSEEEEEEC---------------CEEEEEECCSSCEEEEEECGGGCEEEEEETTSE
T ss_pred CCCEEEEEECCCCCEEEEEeC--CCEEEEEECCCCCCcccccCCCCCcceEEEecccCcEEEEEECCCCCEEEEEeCCCe
Confidence 1 11223333 5554444444 57899999876 11 0111112211222233455556676554 445778
Q ss_pred EEEEeCCCCce
Q 045559 319 LLLYDPNSEEI 329 (335)
Q Consensus 319 l~~yd~~~~~~ 329 (335)
+..||.++++.
T Consensus 334 v~iwd~~~~~~ 344 (393)
T 1erj_A 334 VLFWDKKSGNP 344 (393)
T ss_dssp EEEEETTTCCE
T ss_pred EEEEECCCCeE
Confidence 99999887654
No 224
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=25.30 E-value=4.6e+02 Score=25.20 Aligned_cols=204 Identities=14% Similarity=0.137 Sum_probs=99.8
Q ss_pred cccceEEEeecCceEEEEecchhhhhcCCCCcccCCcCCce-eeeeEEeecCCCCCeEEEEEEEEecCccccccCCCceE
Q 045559 95 PFEGLFIMFIGGDEIALYNHATRDLKFLPKLTLIDNLESIY-TIMFGLGLDPKCNYYKLVYIVTYHDSELGKVLNDSRQV 173 (335)
Q Consensus 95 s~~GLl~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~-~~~~~l~~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~~ 173 (335)
..+|-+.+......++.+||.++++......... +.... .....+..|... . +.+.. .. .+
T Consensus 223 d~~g~lwigt~~~Gl~~~~~~~~~~~~~~~~~~~--~~~l~~~~i~~i~~d~~g-~---lWigt-----------~~-Gl 284 (795)
T 4a2l_A 223 QSPTRIWVATEGAGLFLINPKTKEIKNYLHSPSN--PKSISSNYIRSLAMDSQN-R---LWIGT-----------FN-DL 284 (795)
T ss_dssp EETTEEEEEEBSSCEEEEETTTTEEEEECCCTTC--TTSCSCSBEEEEEECTTS-C---EEEEE-----------SS-CE
T ss_pred cCCCCEEEEECCCCeEEEeCCCCeEEEeecCCCC--ccccCCCeEEEEEEcCCC-C---EEEEe-----------CC-hh
Confidence 3456666555455688888888877665433211 00000 112334444322 1 22221 12 57
Q ss_pred EEEEcCCCcceecCcccc---cccccCCCceeeee--cceEEEEeecCCCCCccCceEEEEEECCccceeeecC-CCccc
Q 045559 174 FIYSFSDNSWRNFQGFEF---GMYDLDEVLDCTYH--NGACHWLVPFGAFHPLCCHYVILSFDMSDEVFEEILG-PNCLL 247 (335)
Q Consensus 174 ~vyss~~~~W~~~~~~p~---~~~~~~~~~~~v~~--~G~~ywl~~~~~~~~~~~~~~i~~fD~~~e~~~~i~~-P~~~~ 247 (335)
.+|+..++.+......+. ...... -.+++. +|. .|++..+ ..|..+|..+..|..+.. |....
T Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~l~~~~--i~~i~~D~~g~-lWigt~~--------~Gl~~~~~~~~~~~~~~~~~~~~~ 353 (795)
T 4a2l_A 285 NIYHEGTDSFASYSSNPVENGSLSQRS--VRSIFMDSQGG-MWLGTYF--------GGLNYYHPIRNRFKNIRNIPYKNS 353 (795)
T ss_dssp EEEETTTTEEEEECCCTTSTTSCSSSC--EEEEEECTTSC-EEEEESS--------SCEEEECGGGGSSEEECCCTTSSS
T ss_pred heEcCCCCeEEEEecCCCCCCCCCCCc--EEEEEEeCCcC-EEEEECC--------CCeEEeCCCcccceEEcCCCCCCC
Confidence 788888887766542221 111111 123333 344 4666542 258889998888877733 22111
Q ss_pred cCCCCeeEEEEe-CCeEEEEEecCCCCEEEEEEECCCCceeEEEEecc------C-CceeeeEEEeeCCE-EEEEecCCe
Q 045559 248 EISPKHTVFGLY-NDSLSFLVFDERESCFDIWTMKERYHWTKEFSTTP------I-LAVDAPIGFWKNDT-FFIRSNTEE 318 (335)
Q Consensus 248 ~~~~~~~~l~~~-~g~L~~~~~~~~~~~~~IW~l~~~~~W~~~~~i~~------~-~~~~~~~~~~~~~~-il~~~~~~~ 318 (335)
.....-..+.+. +|.|.+-... ..+..|-.+ ...+.... ..+ + .....-+....+|. +.+...+..
T Consensus 354 l~~~~V~~i~~d~~g~lWiGt~~---~Gl~~~~~~-~~~~~~~~-~~~~~~~~~l~~~~v~~i~~d~~g~~lWigt~~~G 428 (795)
T 4a2l_A 354 LSDNVVSCIVEDKDKNLWIGTND---GGLNLYNPI-TQRFTSYT-LQEDESARGIGSNNIKAVYVDEKKSLVYIGTHAGG 428 (795)
T ss_dssp CSCSSEEEEEECTTSCEEEEESS---SCEEEECTT-TCCEEEEC-CC------CCSCSCEEEEEEETTTTEEEEEETTTE
T ss_pred CCCCeeEEEEECCCCCEEEEECC---CCeEEEcCC-CCcEEEEe-cCCCCcccCCCCccEEEEEEcCCCCEEEEEeCcCc
Confidence 111112233333 5567765432 233333222 24443321 100 1 11123334445788 788777678
Q ss_pred EEEEeCCCCceeec
Q 045559 319 LLLYDPNSEEIIDF 332 (335)
Q Consensus 319 l~~yd~~~~~~~~v 332 (335)
|..||+++++++.+
T Consensus 429 l~~~d~~~~~~~~~ 442 (795)
T 4a2l_A 429 LSILHRNSGQVENF 442 (795)
T ss_dssp EEEEETTTCCEEEE
T ss_pred eeEEeCCCCcEEEe
Confidence 99999999887765
No 225
>3ju4_A Endo-N-acetylneuraminidase; endonf, polysia, high-resolution, glycosidase, hydrolase; HET: SLB; 0.98A {Enterobacteria phage K1F} PDB: 3gvl_A* 3gvj_A* 3gvk_A* 1v0e_A 1v0f_A*
Probab=25.30 E-value=2.9e+02 Score=24.92 Aligned_cols=63 Identities=11% Similarity=0.037 Sum_probs=46.4
Q ss_pred eeecceEEEEeecCCCCCccCceEEEEEECCccceeeecCCCccccCCCCeeEEEEeCCeEEEEEecC
Q 045559 203 TYHNGACHWLVPFGAFHPLCCHYVILSFDMSDEVFEEILGPNCLLEISPKHTVFGLYNDSLSFLVFDE 270 (335)
Q Consensus 203 v~~~G~~ywl~~~~~~~~~~~~~~i~~fD~~~e~~~~i~~P~~~~~~~~~~~~l~~~~g~L~~~~~~~ 270 (335)
-+.+|++|..+...... .....+..-+...+.|+.+..|..+.. ...-.+..++.|+|+..++
T Consensus 345 kyYdgvLyLtTRgt~~~--~~GS~L~rs~d~Gq~w~slrfp~nvHh---tnlPFakvgD~l~mFgsER 407 (670)
T 3ju4_A 345 KYYDGVLYLITRGTRGD--RLGSSLHRSRDIGQTWESLRFPHNVHH---TTLPFAKVGDDLIMFGSER 407 (670)
T ss_dssp EEETTEEEEEEEESCTT--SCCCEEEEESSTTSSCEEEECTTCCCS---SCCCEEEETTEEEEEEECS
T ss_pred hhhCCEEEEEecCcCCC--CCcceeeeecccCCchhheeccccccc---cCCCcceeCCEEEEEeccc
Confidence 57889999987543210 002367778888999999999977654 4556788899999999875
No 226
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=25.08 E-value=2.4e+02 Score=26.19 Aligned_cols=63 Identities=10% Similarity=0.163 Sum_probs=39.5
Q ss_pred CCeEEEEEecCCCCEEEEEEECCCCceeEEEEeccCCceeeeEEEeeCCEEEEE-ecCCeEEEEeCCC
Q 045559 260 NDSLSFLVFDERESCFDIWTMKERYHWTKEFSTTPILAVDAPIGFWKNDTFFIR-SNTEELLLYDPNS 326 (335)
Q Consensus 260 ~g~L~~~~~~~~~~~~~IW~l~~~~~W~~~~~i~~~~~~~~~~~~~~~~~il~~-~~~~~l~~yd~~~ 326 (335)
+|++.+.... .+.+.||-++. ......... ....-..-+.+.++|++++. ..++.+..||.++
T Consensus 459 dg~~lasgs~--D~~v~lwd~~~-~~~~~~~~~-~h~~~v~~v~fspdg~~las~s~d~~v~~w~~~~ 522 (611)
T 1nr0_A 459 DKQFVAVGGQ--DSKVHVYKLSG-ASVSEVKTI-VHPAEITSVAFSNNGAFLVATDQSRKVIPYSVAN 522 (611)
T ss_dssp TSCEEEEEET--TSEEEEEEEET-TEEEEEEEE-ECSSCEEEEEECTTSSEEEEEETTSCEEEEEGGG
T ss_pred CCCEEEEeCC--CCeEEEEEccC-Cceeeeecc-CCCCceEEEEECCCCCEEEEEcCCCCEEEEEcCC
Confidence 4444444433 57899999886 444333333 34444556777888886654 4567899999876
No 227
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=24.84 E-value=4.4e+02 Score=24.79 Aligned_cols=188 Identities=8% Similarity=-0.023 Sum_probs=87.6
Q ss_pred eEEEeecCceEEEEecchhh-hhcCCCCcccCCcCCceeeeeEEeecCCCCCeEEEEEEEEecCccccccCCCceEEEEE
Q 045559 99 LFIMFIGGDEIALYNHATRD-LKFLPKLTLIDNLESIYTIMFGLGLDPKCNYYKLVYIVTYHDSELGKVLNDSRQVFIYS 177 (335)
Q Consensus 99 Ll~~~~~~~~~~V~NP~T~~-~~~LP~~~~~~~~~~~~~~~~~l~~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~~~vys 177 (335)
|++... ...+.+.+..++. -..++..... ...++.+|+..+. |+.. . .....+..++
T Consensus 11 ~~~~~~-~~~I~~i~~~~~~~~~~~~~~~~~--------~~~~ld~~~~~~~--ly~s-D----------~~~~~I~r~~ 68 (619)
T 3s94_A 11 LLLYAN-RRDLRLVDATNGKENATIVVGGLE--------DAAAVDFVFSHGL--IYWS-D----------VSEEAIKRTE 68 (619)
T ss_dssp CEEEEC-SSBEEEECCC---------CBCCS--------CEEEEEEETTTTE--EEEE-E----------TTTTEEEEEE
T ss_pred eEEEec-cccEEEEeCCCCcceEEEEEcCCC--------ceEEEEEEeCCCE--EEEE-E----------CCCCeEEEEE
Confidence 445444 7777777776543 2333333222 1578888876543 2222 1 1133455555
Q ss_pred cCCCc-ceecCcccccccccCCCceeeee---cceEEEEeecCCCCCccCceEEEEEECCccceeeecCCCccccCCCCe
Q 045559 178 FSDNS-WRNFQGFEFGMYDLDEVLDCTYH---NGACHWLVPFGAFHPLCCHYVILSFDMSDEVFEEILGPNCLLEISPKH 253 (335)
Q Consensus 178 s~~~~-W~~~~~~p~~~~~~~~~~~~v~~---~G~~ywl~~~~~~~~~~~~~~i~~fD~~~e~~~~i~~P~~~~~~~~~~ 253 (335)
..+.. +..+- ..+.. .+ .++.+ +|.+||.... ...|.++|+....-..+-. ..... +..
T Consensus 69 ~~g~~~~~~v~--~~~~~-~P---~GlAvD~~~~~ly~~d~~--------~~~I~v~~~dG~~~~~l~~-~~l~~--P~~ 131 (619)
T 3s94_A 69 FNKTESVQNVV--VSGLL-SP---DGLACDWLGEKLYWTDSE--------TNRIEVSNLDGSLRKVLFW-QELDQ--PRA 131 (619)
T ss_dssp C-----CEEEE--CSSCS-CE---EEEEEETTTTEEEEEETT--------TTEEEEEETTSCSCEEEEC-SSCSC--CCC
T ss_pred ccCCCceEEEE--eCCCC-Cc---CeEEEEecCCEEEEEeCC--------CCEEEEEECCCCCEEEEEe-CCCCC--Cce
Confidence 55432 33221 11111 11 24444 6889998654 3479999987654433311 11111 122
Q ss_pred eEEEEeCCeEEEEEecCCCCEEEEEEECCCCceeEEEEeccCCceeeeEEEee---CCEEEEEec-CCeEEEEeCCCCce
Q 045559 254 TVFGLYNDSLSFLVFDERESCFDIWTMKERYHWTKEFSTTPILAVDAPIGFWK---NDTFFIRSN-TEELLLYDPNSEEI 329 (335)
Q Consensus 254 ~~l~~~~g~L~~~~~~~~~~~~~IW~l~~~~~W~~~~~i~~~~~~~~~~~~~~---~~~il~~~~-~~~l~~yd~~~~~~ 329 (335)
+.+--.+|.|+...... ... ||..+-.++=.+ .+ --..+..|.++.- ++.++.... ...+.++|+++..-
T Consensus 132 Iavdp~~g~ly~tD~g~-~~~--I~r~~~dG~~~~--~l-~~~~~~~P~Glald~~~~~LY~aD~~~~~I~~~~~dG~~~ 205 (619)
T 3s94_A 132 IALDPSSGFMYWTDWGE-VPK--IERAGMDGSSRF--II-INSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNR 205 (619)
T ss_dssp EEEETTTTEEEEEECSS-SCE--EEEEETTSCSCE--EE-ECSSCSSEEEEEEETTTTEEEEEETTTCCEEEESSSCCEE
T ss_pred EEEecCCCeEEEeccCC-CCE--EEEEECCCCceE--EE-EeCCCCCCcEEEEEccCCEEEEEeCCCCeEEEecCCCCcc
Confidence 33333578888877542 233 444433111111 12 0123456666543 356766543 56799999987655
Q ss_pred ee
Q 045559 330 ID 331 (335)
Q Consensus 330 ~~ 331 (335)
+.
T Consensus 206 ~~ 207 (619)
T 3s94_A 206 QA 207 (619)
T ss_dssp C-
T ss_pred EE
Confidence 44
No 228
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=24.67 E-value=3.2e+02 Score=23.10 Aligned_cols=90 Identities=7% Similarity=-0.058 Sum_probs=46.8
Q ss_pred EEEEEECCccceee-ecCCCccccCCCCeeEEEEe-CCe-EEEEEecCCCCEEEEEEECCCCceeEEEEeccCCceeeeE
Q 045559 226 VILSFDMSDEVFEE-ILGPNCLLEISPKHTVFGLY-NDS-LSFLVFDERESCFDIWTMKERYHWTKEFSTTPILAVDAPI 302 (335)
Q Consensus 226 ~i~~fD~~~e~~~~-i~~P~~~~~~~~~~~~l~~~-~g~-L~~~~~~~~~~~~~IW~l~~~~~W~~~~~i~~~~~~~~~~ 302 (335)
.|..+|+.+.+... +..... .-..++.. +|. +.+.+.. ...+.||-++. . .....+ .......-+
T Consensus 250 ~i~~wd~~~~~~~~~~~~~~~------~v~~l~~sp~~~~~lasgs~--D~~i~iwd~~~-~--~~~~~~-~H~~~V~~v 317 (357)
T 4g56_B 250 NVSLVNIKNPDSAQTSAVHSQ------NITGLAYSYHSSPFLASISE--DCTVAVLDADF-S--EVFRDL-SHRDFVTGV 317 (357)
T ss_dssp CEEEEESSCGGGCEEECCCSS------CEEEEEECSSSSCCEEEEET--TSCEEEECTTS-C--EEEEEC-CCSSCEEEE
T ss_pred ceeEEECCCCcEeEEEeccce------eEEEEEEcCCCCCEEEEEeC--CCEEEEEECCC-C--cEeEEC-CCCCCEEEE
Confidence 57778887654322 232211 12233333 443 4333333 46799997664 3 222333 344434445
Q ss_pred EEee-CCEEEE-EecCCeEEEEeCCCC
Q 045559 303 GFWK-NDTFFI-RSNTEELLLYDPNSE 327 (335)
Q Consensus 303 ~~~~-~~~il~-~~~~~~l~~yd~~~~ 327 (335)
++.+ ++.+++ ...++.+..||+.++
T Consensus 318 afsP~d~~~l~s~s~Dg~v~iW~~~~~ 344 (357)
T 4g56_B 318 AWSPLDHSKFTTVGWDHKVLHHHLPSE 344 (357)
T ss_dssp EECSSSTTEEEEEETTSCEEEEECC--
T ss_pred EEeCCCCCEEEEEcCCCeEEEEECCCC
Confidence 6564 666655 455788999998653
No 229
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=24.60 E-value=1.3e+02 Score=26.61 Aligned_cols=52 Identities=10% Similarity=-0.073 Sum_probs=35.4
Q ss_pred EEEEECCCCceeEEEEeccCCceeeeEEEeeCCEEE-EEe----------cCCeEEEEeCCCCcee
Q 045559 276 DIWTMKERYHWTKEFSTTPILAVDAPIGFWKNDTFF-IRS----------NTEELLLYDPNSEEII 330 (335)
Q Consensus 276 ~IW~l~~~~~W~~~~~i~~~~~~~~~~~~~~~~~il-~~~----------~~~~l~~yd~~~~~~~ 330 (335)
.|+++|. .....+.+| +...... +.+.+||+.+ +.. +++.+.++|++|++..
T Consensus 60 ~V~ViD~-~t~~v~~~I-~vG~~P~-va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t~~v~ 122 (386)
T 3sjl_D 60 QQFVIDG-EAGRVIGMI-DGGFLPN-PVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLLPT 122 (386)
T ss_dssp EEEEEET-TTTEEEEEE-EECSSCE-EEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEE
T ss_pred EEEEEEC-CCCeEEEEE-ECCCCCc-EEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCeEE
Confidence 6777775 555666777 5554456 7778888844 433 2356999999998863
No 230
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=24.12 E-value=2.7e+02 Score=24.11 Aligned_cols=23 Identities=13% Similarity=0.160 Sum_probs=16.1
Q ss_pred CCEEEEEecCCeEEEEeCCCCce
Q 045559 307 NDTFFIRSNTEELLLYDPNSEEI 329 (335)
Q Consensus 307 ~~~il~~~~~~~l~~yd~~~~~~ 329 (335)
+|.++.-..+.+++..|++|++.
T Consensus 111 ~g~Vy~Gs~~g~l~ald~~tG~~ 133 (339)
T 2be1_A 111 DEKVYTGSMRTIMYTINMLNGEI 133 (339)
T ss_dssp CEEEEECEEEEEEEEEETTTCCE
T ss_pred CCEEEEEecCCEEEEEECCCCcE
Confidence 45566666667788888887665
No 231
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=23.93 E-value=3.6e+02 Score=23.50 Aligned_cols=68 Identities=13% Similarity=0.215 Sum_probs=40.4
Q ss_pred CCeEEEEEecCCCCEEEEEEE--CCCCceeEEEEeccCCceeeeEEEeeCCEEEEEecC--------C--eEEEEeCCCC
Q 045559 260 NDSLSFLVFDERESCFDIWTM--KERYHWTKEFSTTPILAVDAPIGFWKNDTFFIRSNT--------E--ELLLYDPNSE 327 (335)
Q Consensus 260 ~g~L~~~~~~~~~~~~~IW~l--~~~~~W~~~~~i~~~~~~~~~~~~~~~~~il~~~~~--------~--~l~~yd~~~~ 327 (335)
+|+..++.... ...+.||-+ +....+..+.++ ....-..-+.+.+ +.+++.... + .++.++.+++
T Consensus 318 ~~~~l~~~~~~-d~~i~iw~~~~~~~~~l~~~~~~-~~~~~v~~~~~~~-~~~~v~~~~~~~~~~~~~~i~v~~~~~~~~ 394 (450)
T 2vdu_B 318 NLPFVAFFVEA-TKCIIILEMSEKQKGDLALKQII-TFPYNVISLSAHN-DEFQVTLDNKESSGVQKNFAKFIEYNLNEN 394 (450)
T ss_dssp SSSEEEEEETT-CSEEEEEEECSSSTTCEEEEEEE-ECSSCEEEEEEET-TEEEEEECCTTCCSSCCCSEEEEEEETTTT
T ss_pred CCCEEEEEECC-CCeEEEEEeccCCCCceeeccEe-ccCCceEEEEecC-CcEEEEEecccCCCCCCcceEEEEEEcCCC
Confidence 45544444422 688999999 324556666667 4443333344454 455554432 1 6888889888
Q ss_pred cee
Q 045559 328 EII 330 (335)
Q Consensus 328 ~~~ 330 (335)
+|+
T Consensus 395 ~~~ 397 (450)
T 2vdu_B 395 SFV 397 (450)
T ss_dssp EEE
T ss_pred eEE
Confidence 885
No 232
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=23.41 E-value=3.1e+02 Score=22.53 Aligned_cols=93 Identities=12% Similarity=-0.040 Sum_probs=46.1
Q ss_pred eEEEEEECCcc--ceeeecCCCccccCCCCeeEEEEe-CCeEEEEEecCCCCEEEEEEECCCCceeEEEEeccCCceeee
Q 045559 225 YVILSFDMSDE--VFEEILGPNCLLEISPKHTVFGLY-NDSLSFLVFDERESCFDIWTMKERYHWTKEFSTTPILAVDAP 301 (335)
Q Consensus 225 ~~i~~fD~~~e--~~~~i~~P~~~~~~~~~~~~l~~~-~g~L~~~~~~~~~~~~~IW~l~~~~~W~~~~~i~~~~~~~~~ 301 (335)
..|..+|+.+. ....+..... .-..+... +|.+.+.... ...+.+|-++. .. ....+ ....-...
T Consensus 197 g~i~i~d~~~~~~~~~~~~~~~~------~v~~~~~~~~~~~l~~~~~--d~~i~v~d~~~-~~--~~~~~-~~~~~~~~ 264 (369)
T 3zwl_B 197 GKISKYDVSNNYEYVDSIDLHEK------SISDMQFSPDLTYFITSSR--DTNSFLVDVST-LQ--VLKKY-ETDCPLNT 264 (369)
T ss_dssp SEEEEEETTTTTEEEEEEECCSS------CEEEEEECTTSSEEEEEET--TSEEEEEETTT-CC--EEEEE-ECSSCEEE
T ss_pred CEEEEEECCCCcEeEEEEecCCC------ceeEEEECCCCCEEEEecC--CceEEEEECCC-Cc--eeeee-cCCCCcee
Confidence 47888998762 2233332211 11223332 5554444444 56899998876 33 22233 22222333
Q ss_pred EEEeeCCEEEEE-ecCC--------------eEEEEeCCCCce
Q 045559 302 IGFWKNDTFFIR-SNTE--------------ELLLYDPNSEEI 329 (335)
Q Consensus 302 ~~~~~~~~il~~-~~~~--------------~l~~yd~~~~~~ 329 (335)
+.+.++++.++. ..+. .+..||.++++.
T Consensus 265 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~ 307 (369)
T 3zwl_B 265 AVITPLKEFIILGGGQEAKDVTTTSANEGKFEARFYHKIFEEE 307 (369)
T ss_dssp EEECSSSSEEEEEECCC-------------CEEEEEETTTCCE
T ss_pred EEecCCCceEEEeecCCCceEEEEecCCCcceeEEEecCCCcc
Confidence 444555554333 2222 678888877654
No 233
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=23.41 E-value=3.4e+02 Score=23.04 Aligned_cols=95 Identities=7% Similarity=-0.028 Sum_probs=50.7
Q ss_pred eEEEEEECCccce--eeecCCCccccCCCCeeEEEEeCCeEEEEEecCCCCEEEEEEECC-CCceeEE-----EEeccCC
Q 045559 225 YVILSFDMSDEVF--EEILGPNCLLEISPKHTVFGLYNDSLSFLVFDERESCFDIWTMKE-RYHWTKE-----FSTTPIL 296 (335)
Q Consensus 225 ~~i~~fD~~~e~~--~~i~~P~~~~~~~~~~~~l~~~~g~L~~~~~~~~~~~~~IW~l~~-~~~W~~~-----~~i~~~~ 296 (335)
..|..+|+.+..- ..+...... .-..+...+|.+.+.... ...+.||.+.. ....... ..+....
T Consensus 313 g~i~vwd~~~~~~~~~~~~~~~~~-----~v~~~~~~~~~~l~s~~~--d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~ 385 (420)
T 3vl1_A 313 GMLAQWDLRSPECPVGEFLINEGT-----PINNVYFAAGALFVSSGF--DTSIKLDIISDPESERPAIEFETPTFLVSND 385 (420)
T ss_dssp SEEEEEETTCTTSCSEEEEESTTS-----CEEEEEEETTEEEEEETT--TEEEEEEEECCTTCCSCEECTTSCEEECCSS
T ss_pred CeEEEEEcCCCcCchhhhhccCCC-----CceEEEeCCCCEEEEecC--CccEEEEeccCCCCCccceeccCccEEccCC
Confidence 4788899877532 233221111 223345557775444443 57899999987 1111110 0010112
Q ss_pred ceeeeEEEeeCCE----EEEEecCCeEEEEeCCC
Q 045559 297 AVDAPIGFWKNDT----FFIRSNTEELLLYDPNS 326 (335)
Q Consensus 297 ~~~~~~~~~~~~~----il~~~~~~~l~~yd~~~ 326 (335)
....-+++..++. ++.....+.+..|+++.
T Consensus 386 ~~v~~~~~s~~~~~~g~l~a~g~~g~~~~~~~~~ 419 (420)
T 3vl1_A 386 DAVSQFCYVSDDESNGEVLEVGKNNFCALYNLSN 419 (420)
T ss_dssp CCCCEEEEECCSSSSCEEEEEETTTEEEEEESCC
T ss_pred cceEEEEEccCCCCcceEEEEcCCceEEEEeccC
Confidence 2233445555555 77777777889999864
No 234
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=22.87 E-value=3.1e+02 Score=22.37 Aligned_cols=55 Identities=4% Similarity=-0.113 Sum_probs=31.7
Q ss_pred CCEEEEEEECC-CCceeEEEEeccCCceeeeEEEee-CCEEE-EEecCCeEEEEeCCCC
Q 045559 272 ESCFDIWTMKE-RYHWTKEFSTTPILAVDAPIGFWK-NDTFF-IRSNTEELLLYDPNSE 327 (335)
Q Consensus 272 ~~~~~IW~l~~-~~~W~~~~~i~~~~~~~~~~~~~~-~~~il-~~~~~~~l~~yd~~~~ 327 (335)
...+.+|-++. ...-...... +...-..-+.+.+ +++.+ ....++.+..||.+.+
T Consensus 169 d~~i~i~d~~~~~~~~~~~~~~-~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~~~~~~ 226 (342)
T 1yfq_A 169 NSQVQWFRLPLCEDDNGTIEES-GLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQ 226 (342)
T ss_dssp TTEEEEEESSCCTTCCCEEEEC-SCSSCEEEEEECSGGGCEEEEEETTSEEEEEECCTT
T ss_pred CCeEEEEECCccccccceeeec-CCCCceeEEEECCCCCCEEEEEecCCcEEEEEEcCC
Confidence 57899999875 2221222222 3343345556666 66654 4555677888777654
No 235
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=22.28 E-value=3.4e+02 Score=22.63 Aligned_cols=62 Identities=8% Similarity=0.062 Sum_probs=38.6
Q ss_pred CCeEEEEEecCCCCEEEEEEECCCCceeEEEEeccCCceeeeEEEeeCCEEEE-EecCCeEEEEeC
Q 045559 260 NDSLSFLVFDERESCFDIWTMKERYHWTKEFSTTPILAVDAPIGFWKNDTFFI-RSNTEELLLYDP 324 (335)
Q Consensus 260 ~g~L~~~~~~~~~~~~~IW~l~~~~~W~~~~~i~~~~~~~~~~~~~~~~~il~-~~~~~~l~~yd~ 324 (335)
+|.+.+.... ...+.||-++. ..|....++........-+.+.++|+.++ ...++.+..||.
T Consensus 161 ~~~~l~s~s~--d~~i~~w~~~~-~~~~~~~~~~~h~~~v~~l~~sp~g~~l~s~s~D~~v~iW~~ 223 (345)
T 3fm0_A 161 SQELLASASY--DDTVKLYREEE-DDWVCCATLEGHESTVWSLAFDPSGQRLASCSDDRTVRIWRQ 223 (345)
T ss_dssp SSSCEEEEET--TSCEEEEEEET-TEEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEE
T ss_pred CCCEEEEEeC--CCcEEEEEecC-CCEEEEEEecCCCCceEEEEECCCCCEEEEEeCCCeEEEecc
Confidence 4554444443 46799998886 77877666633333344566667777554 445667877774
No 236
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=21.80 E-value=3.5e+02 Score=22.50 Aligned_cols=92 Identities=15% Similarity=0.152 Sum_probs=51.6
Q ss_pred EEEEEECCccceeee-cCCCccccCCCCeeEEEEe-CCeEEEEEecCCCCEEEEEEECCCCceeEEEEeccCCceeeeEE
Q 045559 226 VILSFDMSDEVFEEI-LGPNCLLEISPKHTVFGLY-NDSLSFLVFDERESCFDIWTMKERYHWTKEFSTTPILAVDAPIG 303 (335)
Q Consensus 226 ~i~~fD~~~e~~~~i-~~P~~~~~~~~~~~~l~~~-~g~L~~~~~~~~~~~~~IW~l~~~~~W~~~~~i~~~~~~~~~~~ 303 (335)
.|..+|+.+...... ..... .-..+... +|.+.+.+.. ...+.||-+.. . ....++.....-..-++
T Consensus 165 ~i~~wd~~~~~~~~~~~~h~~------~v~~~~~~~~~~~l~sg~~--d~~v~~wd~~~-~--~~~~~~~~h~~~v~~v~ 233 (340)
T 1got_B 165 TCALWDIETGQQTTTFTGHTG------DVMSLSLAPDTRLFVSGAC--DASAKLWDVRE-G--MCRQTFTGHESDINAIC 233 (340)
T ss_dssp CEEEEETTTTEEEEEECCCSS------CEEEEEECTTSSEEEEEET--TSCEEEEETTT-C--SEEEEECCCSSCEEEEE
T ss_pred cEEEEECCCCcEEEEEcCCCC------ceEEEEECCCCCEEEEEeC--CCcEEEEECCC-C--eeEEEEcCCcCCEEEEE
Confidence 577788876654322 21111 11223333 5555555554 57899998876 2 23334422333344556
Q ss_pred EeeCCEEEE-EecCCeEEEEeCCCCc
Q 045559 304 FWKNDTFFI-RSNTEELLLYDPNSEE 328 (335)
Q Consensus 304 ~~~~~~il~-~~~~~~l~~yd~~~~~ 328 (335)
+.++++.++ ...++.+..||+++++
T Consensus 234 ~~p~~~~l~s~s~d~~v~iwd~~~~~ 259 (340)
T 1got_B 234 FFPNGNAFATGSDDATCRLFDLRADQ 259 (340)
T ss_dssp ECTTSSEEEEEETTSCEEEEETTTTE
T ss_pred EcCCCCEEEEEcCCCcEEEEECCCCc
Confidence 667777554 4457789999988765
No 237
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=21.50 E-value=3.4e+02 Score=22.29 Aligned_cols=60 Identities=10% Similarity=0.244 Sum_probs=36.0
Q ss_pred CCEEEEEEECC--CCceeEEEEeccCCceeeeEEEeeCCEEEE-EecCCeEEEEeCC-CCceeec
Q 045559 272 ESCFDIWTMKE--RYHWTKEFSTTPILAVDAPIGFWKNDTFFI-RSNTEELLLYDPN-SEEIIDF 332 (335)
Q Consensus 272 ~~~~~IW~l~~--~~~W~~~~~i~~~~~~~~~~~~~~~~~il~-~~~~~~l~~yd~~-~~~~~~v 332 (335)
...+.||-++. ...|.....- .+.....-+++.++|+++. ...++.+..||.. .++|+.+
T Consensus 237 D~~v~iw~~~~~~~~~~~~~~~~-~~~~~v~~v~~sp~g~~las~~~D~~v~lw~~~~~g~~~~~ 300 (316)
T 3bg1_A 237 DGRVFIWTCDDASSNTWSPKLLH-KFNDVVWHVSWSITANILAVSGGDNKVTLWKESVDGQWVCI 300 (316)
T ss_dssp TCEEEEEECSSTTCCCCBCCEEE-ECSSCEEEEEECTTTCCEEEEESSSCEEEEEECTTSCEEEE
T ss_pred CCeEEEEEccCccccchhhhhhh-cCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEECCCCcEEEe
Confidence 57899999876 2345432111 2333344456667888654 4557778888865 4566654
No 238
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=21.31 E-value=5.1e+02 Score=24.30 Aligned_cols=103 Identities=10% Similarity=0.015 Sum_probs=53.4
Q ss_pred eEEEEEECCc-cceeeecCCCccccCCCCeeEEEEeCCe-EEEEEecCCCCEEEEEEECC-CCceeEEEEeccCCc---e
Q 045559 225 YVILSFDMSD-EVFEEILGPNCLLEISPKHTVFGLYNDS-LSFLVFDERESCFDIWTMKE-RYHWTKEFSTTPILA---V 298 (335)
Q Consensus 225 ~~i~~fD~~~-e~~~~i~~P~~~~~~~~~~~~l~~~~g~-L~~~~~~~~~~~~~IW~l~~-~~~W~~~~~i~~~~~---~ 298 (335)
..|..+|+.+ .+...+..+...... ...... -+|+ |++...........||+.+. +........- .... .
T Consensus 263 ~~l~~~d~~~~~~~~~~~~~~~~~~~-~~~~~~--pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~-~~~~~~~~ 338 (741)
T 2ecf_A 263 VKLGVISPAEQAQTQWIDLGKEQDIY-LARVNW--RDPQHLSFQRQSRDQKKLDLVEVTLASNQQRVLAHE-TSPTWVPL 338 (741)
T ss_dssp EEEEEECSSTTCCCEEECCCSCSSEE-EEEEEE--EETTEEEEEEEETTSSEEEEEEEETTTCCEEEEEEE-ECSSCCCC
T ss_pred eEEEEEECCCCCceEEecCCCCcceE-EEEEEe--CCCCEEEEEEecccCCeEEEEEEECCCCceEEEEEc-CCCCcCCc
Confidence 3677888887 766655443111100 012333 4555 76666544345666766665 3444443333 1211 1
Q ss_pred eeeEEEeeCCEEEEEec-C--CeEEEEeCCCCceeec
Q 045559 299 DAPIGFWKNDTFFIRSN-T--EELLLYDPNSEEIIDF 332 (335)
Q Consensus 299 ~~~~~~~~~~~il~~~~-~--~~l~~yd~~~~~~~~v 332 (335)
..-+.+.+||++++... + ..|+.+|++++ .+.+
T Consensus 339 ~~~~~~spdg~~~~~~~~~g~~~l~~~~~~~~-~~~l 374 (741)
T 2ecf_A 339 HNSLRFLDDGSILWSSERTGFQHLYRIDSKGK-AAAL 374 (741)
T ss_dssp CSCCEECTTSCEEEEECTTSSCEEEEECSSSC-EEES
T ss_pred CCceEECCCCeEEEEecCCCccEEEEEcCCCC-eeee
Confidence 12345567888665543 2 36888887665 4433
No 239
>2jp2_A Spred-2, sprouty-related, EVH1 domain-containing protein 2; solution structure, structural genomics, structural genomics consortium, SGC; NMR {Homo sapiens}
Probab=21.19 E-value=1.1e+02 Score=22.40 Aligned_cols=44 Identities=2% Similarity=-0.259 Sum_probs=27.1
Q ss_pred CceEEEEecchhhhhcCCCCcccCCcCCceeeeeEEee---cCCCCCeEEEEEE
Q 045559 106 GDEIALYNHATRDLKFLPKLTLIDNLESIYTIMFGLGL---DPKCNYYKLVYIV 156 (335)
Q Consensus 106 ~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~l~~---d~~~~~ykVv~~~ 156 (335)
...++++||.|+.|...... . .....+.+.. |...++|+|+...
T Consensus 19 ~A~Vm~~D~~~~~W~p~~~g--~-----ls~v~v~~~~~~~d~~~~~yrI~~~~ 65 (126)
T 2jp2_A 19 KAVVMTRDDSSGGWFPQEGG--G-----ISRVGVCKVMHPEGNGRSGFLIHGER 65 (126)
T ss_dssp EEEEEEECTTSSSSEECSCC--S-----CEEEEEECCBCTTCSSCBCEEEEEEE
T ss_pred EEEEeeEcCCCCCEeeCCCC--C-----cccEEEEEecCCCCCCCCEEEEEEEE
Confidence 45688999999987555432 2 2122233333 5566789988874
No 240
>2lyd_A Decapping protein 1; DCP1, XRN1, transcription-protein binding complex; NMR {Drosophila melanogaster}
Probab=20.93 E-value=52 Score=24.39 Aligned_cols=26 Identities=8% Similarity=0.061 Sum_probs=17.6
Q ss_pred EEEEEecCCeEEEEeCCCCceeeccc
Q 045559 309 TFFIRSNTEELLLYDPNSEEIIDFQH 334 (335)
Q Consensus 309 ~il~~~~~~~l~~yd~~~~~~~~v~~ 334 (335)
+|+.....-.++.||..+++|++.+|
T Consensus 30 ~Il~~a~~v~vY~f~~~~~~W~K~~i 55 (134)
T 2lyd_A 30 EIVDSSSHVAFYTFNSSQNEWEKTDV 55 (134)
T ss_dssp EEEEEEEEEEEEEEETTTTEEEEEEE
T ss_pred HHHhhCCeEEEEEecCCcCceeEcCC
Confidence 34444443457788888999988765
No 241
>1e0n_A Hypothetical protein; YJQ8WW domain, WW domain, saccharomyces cerevisae, YJQ8 protein; NMR {Saccharomyces cerevisiae} SCOP: b.72.1.1
Probab=20.92 E-value=94 Score=15.73 Aligned_cols=17 Identities=12% Similarity=0.208 Sum_probs=12.4
Q ss_pred EecCCeEEEEeCCCCce
Q 045559 313 RSNTEELLLYDPNSEEI 329 (335)
Q Consensus 313 ~~~~~~l~~yd~~~~~~ 329 (335)
....++.++||..|++-
T Consensus 6 ~~~~g~~YYyN~~T~~s 22 (27)
T 1e0n_A 6 IHENGRPLYYNAEQKTK 22 (27)
T ss_dssp EESSSSEEEEETTTTEE
T ss_pred ECCCCCeEEEECCCCCE
Confidence 34456789999988763
No 242
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=20.71 E-value=4.7e+02 Score=23.57 Aligned_cols=65 Identities=15% Similarity=0.159 Sum_probs=39.9
Q ss_pred CCe-EEEEEecCCCCEEEEEEECCCCceeEEEEeccCCc---eeeeEEEeeC-CEEEE-EecCCeEEEEeCCCCce
Q 045559 260 NDS-LSFLVFDERESCFDIWTMKERYHWTKEFSTTPILA---VDAPIGFWKN-DTFFI-RSNTEELLLYDPNSEEI 329 (335)
Q Consensus 260 ~g~-L~~~~~~~~~~~~~IW~l~~~~~W~~~~~i~~~~~---~~~~~~~~~~-~~il~-~~~~~~l~~yd~~~~~~ 329 (335)
+|. +.+.... ...+.||-++. .....++..... ...-+.+.++ ++.++ ...++.+..||+++++.
T Consensus 171 ~~~~~l~~~~~--d~~v~vwd~~~---~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~ 241 (615)
T 1pgu_A 171 SRPMRSMTVGD--DGSVVFYQGPP---FKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSGEF 241 (615)
T ss_dssp SSSCEEEEEET--TTEEEEEETTT---BEEEEEECSSSCTTCCEEEEEECSTTCCEEEEEETTCCEEEEETTTCCE
T ss_pred CCCcEEEEEeC--CCcEEEEeCCC---cceeeeecccCCCCceEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCE
Confidence 443 4444443 57899998765 344455522333 3445566677 77655 45677899999887664
No 243
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=20.60 E-value=5.1e+02 Score=24.00 Aligned_cols=96 Identities=13% Similarity=-0.049 Sum_probs=54.5
Q ss_pred ceEEEEEECCcccee-eecCCCccccCCCCeeEEEEeCCe-EEEEEecCCCCEEEEEEECCCCceeEEEEeccCCceeee
Q 045559 224 HYVILSFDMSDEVFE-EILGPNCLLEISPKHTVFGLYNDS-LSFLVFDERESCFDIWTMKERYHWTKEFSTTPILAVDAP 301 (335)
Q Consensus 224 ~~~i~~fD~~~e~~~-~i~~P~~~~~~~~~~~~l~~~~g~-L~~~~~~~~~~~~~IW~l~~~~~W~~~~~i~~~~~~~~~ 301 (335)
...|..+|..+.+.. .++..... +.....-+|+ |++.. . ...+.+|-+.. ..-..+.+| +...-.+-
T Consensus 176 ~~~V~viD~~t~~v~~~i~~g~~p------~~v~~SpDGr~lyv~~-~--dg~V~viD~~~-~t~~~v~~i-~~G~~P~~ 244 (567)
T 1qks_A 176 AGQIALIDGSTYEIKTVLDTGYAV------HISRLSASGRYLFVIG-R--DGKVNMIDLWM-KEPTTVAEI-KIGSEARS 244 (567)
T ss_dssp TTEEEEEETTTCCEEEEEECSSCE------EEEEECTTSCEEEEEE-T--TSEEEEEETTS-SSCCEEEEE-ECCSEEEE
T ss_pred CCeEEEEECCCCeEEEEEeCCCCc------cceEECCCCCEEEEEc-C--CCeEEEEECCC-CCCcEeEEE-ecCCCCce
Confidence 347999999876543 34433221 2122233666 55543 3 45677776641 112445667 55444455
Q ss_pred EEEe----eCCEEEEEe--cCCeEEEEeCCCCcee
Q 045559 302 IGFW----KNDTFFIRS--NTEELLLYDPNSEEII 330 (335)
Q Consensus 302 ~~~~----~~~~il~~~--~~~~l~~yd~~~~~~~ 330 (335)
+.++ .||+.++.. ..+.+.++|..|.+..
T Consensus 245 ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~ 279 (567)
T 1qks_A 245 IETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPK 279 (567)
T ss_dssp EEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEE
T ss_pred eEEccccCCCCCEEEEEEccCCeEEEEECCCCcEE
Confidence 6667 378754433 3678999998886653
No 244
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=20.57 E-value=4.3e+02 Score=23.06 Aligned_cols=30 Identities=13% Similarity=0.446 Sum_probs=25.2
Q ss_pred eEEEEEecCCCCEEEEEEECCCCceeEEEEec
Q 045559 262 SLSFLVFDERESCFDIWTMKERYHWTKEFSTT 293 (335)
Q Consensus 262 ~L~~~~~~~~~~~~~IW~l~~~~~W~~~~~i~ 293 (335)
++|++... +..+.+|...+...|.+.|+..
T Consensus 54 ~~~~~~~~--~~~v~lw~~~~~~~~~~~~~~~ 83 (356)
T 2w18_A 54 EPCIITAC--EDVVSLWKALDAWQWEKLYTWH 83 (356)
T ss_dssp EEEEEEEE--SSEEEEEEESSSSBEEEEEEEE
T ss_pred ccEEEEec--cceEEEcccCCCccceeeEEEe
Confidence 48998887 6889999999866899998883
No 245
>3h6j_A Neuraminidase, sialidase; six-bladed beta-propeller, cell WALL, glycosidase, hydrolase, peptidoglycan-anchor, secreted; 1.60A {Pseudomonas aeruginosa} PDB: 2w38_A
Probab=20.31 E-value=3.5e+02 Score=21.95 Aligned_cols=92 Identities=5% Similarity=-0.023 Sum_probs=50.6
Q ss_pred eeeeecceEEEEeecCCCCCccCceEEEEEECCccceeeecCCCccccCCCCeeEEE-EeCCeEEEEEecCCCCEEEEEE
Q 045559 201 DCTYHNGACHWLVPFGAFHPLCCHYVILSFDMSDEVFEEILGPNCLLEISPKHTVFG-LYNDSLSFLVFDERESCFDIWT 279 (335)
Q Consensus 201 ~~v~~~G~~ywl~~~~~~~~~~~~~~i~~fD~~~e~~~~i~~P~~~~~~~~~~~~l~-~~~g~L~~~~~~~~~~~~~IW~ 279 (335)
+-+..+|.+|.+......+...+...++---++...|+.-..-......+.....=+ +-.|++.......+..++.+++
T Consensus 27 mdilsdgslyliyrratehvggsdgrvvfskleggiwsaptivaqaggqdfrdvaggtmpsgrivaastvyetgevkvyv 106 (438)
T 3h6j_A 27 MDILSDGSLYLIYRRATEHVGGSDGRVVFSKLEGGIWSAPTIVAQAGGQDFRDVAGGTMPSGRIVAASTVYETGEVKVYV 106 (438)
T ss_dssp EEECTTSCEEEEEEEESCCSTTSCCEEEEEEEETTEECCCEEEECCTTCCEEEEEEEECTTSCEEEEEEETTTTEEEEEE
T ss_pred eeeecCCeEEEEEeechhccCCCCceEEEEeccCccccCcchhhhhcCcchhhhcCCcCCCccEEEEEEEEecccEEEEE
Confidence 357778999888644322211112334433466666653211011111111222222 2366766665555588999999
Q ss_pred ECC-CCceeEEEEe
Q 045559 280 MKE-RYHWTKEFST 292 (335)
Q Consensus 280 l~~-~~~W~~~~~i 292 (335)
-++ .-.|..++++
T Consensus 107 sddsgvtwvhkftl 120 (438)
T 3h6j_A 107 SDDSGVTWVHKFTL 120 (438)
T ss_dssp ESSTTSSCEEEEEE
T ss_pred ecCCCcEEEEEEEe
Confidence 999 7789999988
No 246
>4hat_B RAN-specific GTPase-activating protein 1; heat repeat, nuclear export, RAN-ranbp1, LMB, leptomycin B, protein transport-antibiotic complex; HET: GNP LMB; 1.78A {Saccharomyces cerevisiae} PDB: 4hau_B* 4hav_B* 4haw_B* 4hax_B* 4hay_B* 4haz_B* 4hb0_B* 4hb2_B* 4hb3_B* 4hb4_B* 4gmx_B* 4gpt_B*
Probab=20.22 E-value=60 Score=24.25 Aligned_cols=27 Identities=11% Similarity=0.274 Sum_probs=19.4
Q ss_pred CEEEEEecCCeEEEEeCCCCceeecccC
Q 045559 308 DTFFIRSNTEELLLYDPNSEEIIDFQHK 335 (335)
Q Consensus 308 ~~il~~~~~~~l~~yd~~~~~~~~v~~~ 335 (335)
.+.++..++ +|+.||.++++|++-++|
T Consensus 22 E~~lf~~ra-KLf~f~~~~~~WkerG~G 48 (140)
T 4hat_B 22 EEVLYKVRA-KLFRFDKDAKEWKERGTG 48 (140)
T ss_dssp EEEEEEEEE-EEEEEETTTTEEEEEEEE
T ss_pred eeEEEEEeE-EEEEEcCCCCCcccccEE
Confidence 336666665 789999888889876653
Done!