Your job contains 1 sequence.
>045563
ETAVTVVLLGWLGARRKHLRRYVEWYNSRGINAITFVVEAKELLSFDLGRGVEKRIADLS
NEIVSWVSHEEQDGKQRCLIFHTFSNTGWFVCGSILASLQGREDLMQKIKGLIVDSGGAG
AFDPKVWAGGFGAAILKKRSSSAYSTVEDGKINGLEGQVSVSMMQDKEPDIIETMLLSLL
EKLFSYIINLPDVNQRIKKVVSAVTNNPPACPHLYLYSTGDKVIPYQSVELLIEEQRKTG
RKVFSVILGHLPTWITSGLSPADTYRSYIIS
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 045563
(271 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:505006253 - symbol:AT2G18245 "AT2G18245" speci... 734 1.2e-72 1
TAIR|locus:2095375 - symbol:AT3G19970 "AT3G19970" species... 528 8.3e-51 1
DICTYBASE|DDB_G0278115 - symbol:DDB_G0278115 "DUF829 fami... 145 1.6e-09 2
ZFIN|ZDB-GENE-040718-384 - symbol:tmem53 "transmembrane p... 120 2.1e-09 2
RGD|1307066 - symbol:Tmem53 "transmembrane protein 53" sp... 106 2.5e-07 2
UNIPROTKB|Q6P2H8 - symbol:TMEM53 "Transmembrane protein 5... 113 3.0e-07 2
DICTYBASE|DDB_G0285447 - symbol:DDB_G0285447 "DUF829 fami... 121 5.1e-07 2
MGI|MGI:1916027 - symbol:Tmem53 "transmembrane protein 53... 107 6.1e-07 2
UNIPROTKB|Q2TBP5 - symbol:TMEM53 "Transmembrane protein 5... 105 1.5e-05 2
WB|WBGene00020402 - symbol:T10B11.6.2 species:6239 "Caeno... 90 0.00014 2
>TAIR|locus:505006253 [details] [associations]
symbol:AT2G18245 "AT2G18245" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] EMBL:CP002685 GO:GO:0016787 EMBL:AC006439
InterPro:IPR008547 PANTHER:PTHR12265 Pfam:PF05705 OMA:MLYRYIV
EMBL:BT025975 IPI:IPI00529528 RefSeq:NP_565432.1 UniGene:At.40022
ProteinModelPortal:Q8S8G6 PRIDE:Q8S8G6 EnsemblPlants:AT2G18245.1
GeneID:816340 KEGG:ath:AT2G18245 TAIR:At2g18245 InParanoid:Q8S8G6
PhylomeDB:Q8S8G6 ProtClustDB:CLSN2688226 ArrayExpress:Q8S8G6
Genevestigator:Q8S8G6 Uniprot:Q8S8G6
Length = 398
Score = 734 (263.4 bits), Expect = 1.2e-72, P = 1.2e-72
Identities = 140/241 (58%), Positives = 179/241 (74%)
Query: 5 TVVLLGWLGARRKHLRRYVEWYNSRGINAITFVVEAKELLSFDLGRGVEKRIADLSNEIV 64
TVVLLGWLGA+ KHLRRYVEWYNSRGINA+TF V+ ++LL DLGR +E+RIA+ NE+V
Sbjct: 124 TVVLLGWLGAKAKHLRRYVEWYNSRGINAVTFTVDVRDLLRLDLGRRLERRIAEFGNELV 183
Query: 65 SWVSHEEQDGKQRCLIFHTFSNTGWFVCGSILASLQGREDLMQKIKGLIVDSGGAGAFDP 124
+WVS +E DG+++CL+FH+FSNTGW V G++L S GR+DL+++IKG I+DSGGA D
Sbjct: 184 NWVSEKEDDGREKCLVFHSFSNTGWLVYGALLESFIGRQDLVERIKGCIIDSGGADPLDT 243
Query: 125 KVWAGGFGAAILKKRSSSAYSTVEDGKINGLEGQVSVSMMQDKEPDIIETMLLSLLEKLF 184
K+WA GF AAILKKRSS+ +T + I + S Q KEP IE ++LS LEKLF
Sbjct: 244 KIWAAGFTAAILKKRSSTI-TTEPNSPIK----EEDASTPQKKEPLGIENIMLSSLEKLF 298
Query: 185 SYIINLPDVNQRIKKVVSAVTNNPPACPHLYLYSTGDKVIPYQSVELLIEEQRKTGRKVF 244
+N PDVN R+ K++ + N P CP LYLYS+GDKV+P SVEL I EQ+K GRK+
Sbjct: 299 PIFLNHPDVNTRLTKIIQKLYENHPPCPQLYLYSSGDKVVPSHSVELRIREQQKIGRKIH 358
Query: 245 S 245
S
Sbjct: 359 S 359
>TAIR|locus:2095375 [details] [associations]
symbol:AT3G19970 "AT3G19970" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0006612 "protein targeting to
membrane" evidence=RCA] [GO:0009414 "response to water deprivation"
evidence=RCA] [GO:0009611 "response to wounding" evidence=RCA]
[GO:0009620 "response to fungus" evidence=RCA] [GO:0009695
"jasmonic acid biosynthetic process" evidence=RCA] [GO:0009753
"response to jasmonic acid stimulus" evidence=RCA] [GO:0009863
"salicylic acid mediated signaling pathway" evidence=RCA]
[GO:0009867 "jasmonic acid mediated signaling pathway"
evidence=RCA] [GO:0010200 "response to chitin" evidence=RCA]
[GO:0010363 "regulation of plant-type hypersensitive response"
evidence=RCA] [GO:0042538 "hyperosmotic salinity response"
evidence=RCA] [GO:0052542 "defense response by callose deposition"
evidence=RCA] EMBL:CP002686 GenomeReviews:BA000014_GR EMBL:AP002050
eggNOG:NOG241561 InterPro:IPR008547 PANTHER:PTHR12265 Pfam:PF05705
ProtClustDB:CLSN2688226 EMBL:AY039875 EMBL:BT006339 IPI:IPI00543702
RefSeq:NP_566652.1 UniGene:At.5939 ProteinModelPortal:Q9LHE8
SMR:Q9LHE8 STRING:Q9LHE8 EnsemblPlants:AT3G19970.1 GeneID:821535
KEGG:ath:AT3G19970 TAIR:At3g19970 HOGENOM:HOG000070471
InParanoid:Q9LHE8 OMA:YADWYTS PhylomeDB:Q9LHE8
Genevestigator:Q9LHE8 Uniprot:Q9LHE8
Length = 434
Score = 528 (190.9 bits), Expect = 8.3e-51, P = 8.3e-51
Identities = 109/240 (45%), Positives = 152/240 (63%)
Query: 6 VVLLGWLGARRKHLRRYVEWYNSRGINAITFVVEAKELLSFDLGRGVEKRIADLSNEIVS 65
VVLLGWLG+++KHL++Y +WY S+G + ITF + E++S+ +G EK I L N +
Sbjct: 165 VVLLGWLGSKQKHLKKYADWYTSKGYHVITFTLPMNEIMSYQVGGKAEKNIESLVNHLAD 224
Query: 66 WVSHEEQDGKQRCLIFHTFSNTGWFVCGSILASLQGRED-LMQKIKGLIVDSGGAGAFDP 124
W+ EEQ ++ L+FHTFSNTGW G+IL Q ++ LM ++KG IVDS A DP
Sbjct: 225 WLD-EEQ---KKNLVFHTFSNTGWLTYGAILEKFQKQDSSLMGRVKGCIVDSAPVAAADP 280
Query: 125 KVWAGGFGAAILKKRSSSAYSTVEDG-KINGLEGQVSVSMMQDKEPDIIETMLLSLLEKL 183
VWA GF AA LKK S + + + NG +++S Q K P ET LL +LEK
Sbjct: 281 TVWASGFSAAFLKKSSVATKGSASSSYESNG----INIS--QPK-PAATETALLLVLEKF 333
Query: 184 FSYIINLPDVNQRIKKVVSAVTNNPPACPHLYLYSTGDKVIPYQSVELLIEEQRKTGRKV 243
F+ I+NLP VN+R+ V+ ++ P+CP LY+YS+ D+VIP + VE I EQRK G +V
Sbjct: 334 FAVILNLPKVNRRLADVLDTLSTAQPSCPQLYIYSSADRVIPVEQVESFIVEQRKAGHEV 393
>DICTYBASE|DDB_G0278115 [details] [associations]
symbol:DDB_G0278115 "DUF829 family protein"
species:44689 "Dictyostelium discoideum" [GO:0008150
"biological_process" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] [GO:0044351 "macropinocytosis" evidence=RCA]
dictyBase:DDB_G0278115 EMBL:AAFI02000023 InterPro:IPR008547
PANTHER:PTHR12265 Pfam:PF05705 eggNOG:NOG241330
ProtClustDB:CLSZ2430163 RefSeq:XP_642134.1 PRIDE:Q54YR8
EnsemblProtists:DDB0238661 GeneID:8621342 KEGG:ddi:DDB_G0278115
OMA:KFASRRA Uniprot:Q54YR8
Length = 270
Score = 145 (56.1 bits), Expect = 1.6e-09, Sum P(2) = 1.6e-09
Identities = 38/114 (33%), Positives = 60/114 (52%)
Query: 6 VVLLGWLGARRKHLRRYVEWYNSRGINAITFVVEAKELLSFDLGRGVEKRIADLSNEIVS 65
VV+LGW+G RR+HL +YV+ + RG N +F + +LL GV + D E +
Sbjct: 30 VVVLGWMGCRREHLLKYVDQWRKRGFNTFSFCSKPIQLLV----PGVIQNKGDEMLEQIK 85
Query: 66 WVSHEEQDGKQRCLIFHTFSNTGWFVCGSILASLQGRED---LMQKIKGLIVDS 116
E ++ K +IF+ FSN G F ++ + RED + +KG ++DS
Sbjct: 86 KYLKENRNCKS--VIFNAFSNGGGFYYAHMIRQIHEREDCKWMAPLVKGTVLDS 137
Score = 47 (21.6 bits), Expect = 1.6e-09, Sum P(2) = 1.6e-09
Identities = 14/65 (21%), Positives = 28/65 (43%)
Query: 169 PDIIETMLLSLLEKLFSYIINLPDVNQRIKKVVSAVTNNPPACPHLYLYSTGDKVIPYQS 228
P++ T LL+L+ LF + ++ +T+ HL YS D ++
Sbjct: 155 PNMFVTFLLALVVPLFVVLFW-----SKMSSYQQILTSKKNQWQHLIFYSKADTIVHSDD 209
Query: 229 VELLI 233
++ L+
Sbjct: 210 IDNLV 214
>ZFIN|ZDB-GENE-040718-384 [details] [associations]
symbol:tmem53 "transmembrane protein 53"
species:7955 "Danio rerio" [GO:0008150 "biological_process"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] ZFIN:ZDB-GENE-040718-384 GO:GO:0016021
CTD:79639 eggNOG:NOG241561 GeneTree:ENSGT00390000000715
HOGENOM:HOG000230532 HOVERGEN:HBG056173 OrthoDB:EOG43JC5B
InterPro:IPR008547 PANTHER:PTHR12265 Pfam:PF05705 EMBL:BC075937
IPI:IPI00496847 RefSeq:NP_001002637.1 UniGene:Dr.84495
Ensembl:ENSDART00000056649 GeneID:436910 KEGG:dre:436910
InParanoid:Q6DHN0 OMA:MLYRYIV NextBio:20831337 Bgee:Q6DHN0
Uniprot:Q6DHN0
Length = 281
Score = 120 (47.3 bits), Expect = 2.1e-09, Sum P(2) = 2.1e-09
Identities = 31/113 (27%), Positives = 55/113 (48%)
Query: 6 VVLLGWLGARRKHLRRYVEWYNSRGINAITFVVEAKEL-LSFDLGRGVEKRIADLSNEIV 64
V+LLGW G+R KHL +Y YN +G + + K + +S LG K + +++++
Sbjct: 30 VILLGWAGSRDKHLAKYSSIYNEQGCTTLRYTAPLKTVFISESLGY---KELRSTAHKLL 86
Query: 65 SWVSHEEQDGKQRCLIFHTFSNTGWFVCGSILASLQGREDLMQK-IKGLIVDS 116
+ E + + FH FSN G+ + ++ L + + G +VDS
Sbjct: 87 ELLYDYEVENNP--IFFHVFSNGGFMLYRYMVELLHSHKQFSTLCVVGTVVDS 137
Score = 78 (32.5 bits), Expect = 2.1e-09, Sum P(2) = 2.1e-09
Identities = 16/43 (37%), Positives = 26/43 (60%)
Query: 203 AVTNNPPACPHLYLYSTGDKVIPYQSVELLIEEQRKTGRKVFS 245
A+ +P P +YLYS D+VI Y+ VE +++ ++ G V S
Sbjct: 196 AMMEHPAPWPQMYLYSRADRVIRYRDVEKMVKGLQEKGLMVES 238
>RGD|1307066 [details] [associations]
symbol:Tmem53 "transmembrane protein 53" species:10116 "Rattus
norvegicus" [GO:0016021 "integral to membrane" evidence=IEA]
RGD:1307066 GO:GO:0016021 EMBL:CH474008 CTD:79639
GeneTree:ENSGT00390000000715 OrthoDB:EOG43JC5B InterPro:IPR008547
PANTHER:PTHR12265 Pfam:PF05705 IPI:IPI00199476
RefSeq:NP_001101434.1 UniGene:Rn.8133 Ensembl:ENSRNOT00000025990
GeneID:313529 KEGG:rno:313529 UCSC:RGD:1307066 NextBio:666356
Uniprot:D3ZPB8
Length = 276
Score = 106 (42.4 bits), Expect = 2.5e-07, Sum P(2) = 2.5e-07
Identities = 32/113 (28%), Positives = 54/113 (47%)
Query: 6 VVLLGWLGARRKHLRRYVEWYNSRGINAITFVVEAKELLSFDLGRGVEKRIADLSNEIVS 65
V+LLGW G R K+L +Y Y+ RG I + ++ F G+ + ++ +++
Sbjct: 36 VILLGWGGCRDKNLAKYSAIYHKRGCIVIRYTAPW-HMVFFSESLGIPS-LRVVAQKLLE 93
Query: 66 WVSHEEQDGKQRCLIFHTFSNTGWFVCGSILASLQGREDLMQ-KIKGLIVDSG 117
+ E + + L+FH FSN G + +L LQ + + G I DSG
Sbjct: 94 LLFDYEIEREP--LLFHVFSNAGVMLYRYVLELLQTHQRFRHLHVVGTIFDSG 144
Score = 74 (31.1 bits), Expect = 2.5e-07, Sum P(2) = 2.5e-07
Identities = 20/80 (25%), Positives = 41/80 (51%)
Query: 160 SVSMMQDKEPDIIETMLLS---LLEKLFSYIINLPDVNQRIKKVVSAVTNNPPACPHLYL 216
+++ + ++ P ++ +LL+ L+ LF ++ P + ++ P LYL
Sbjct: 156 ALATILERRPAVLRLLLLAAFALVVVLFHFLF-APFTALFHTHFYDRLQDSGSCWPELYL 214
Query: 217 YSTGDKVIPYQSVELLIEEQ 236
YS DKV+ + VE ++EE+
Sbjct: 215 YSRADKVVSARDVERMVEER 234
>UNIPROTKB|Q6P2H8 [details] [associations]
symbol:TMEM53 "Transmembrane protein 53" species:9606 "Homo
sapiens" [GO:0016021 "integral to membrane" evidence=IEA]
GO:GO:0016021 EMBL:CH471059 EMBL:AL122004 CTD:79639
eggNOG:NOG241561 HOGENOM:HOG000230532 HOVERGEN:HBG056173
InterPro:IPR008547 PANTHER:PTHR12265 Pfam:PF05705 OMA:MLYRYIV
EMBL:AK026006 EMBL:AK296548 EMBL:CR457348 EMBL:AL832539
EMBL:BC064520 IPI:IPI00418344 IPI:IPI00844053 RefSeq:NP_078863.2
UniGene:Hs.22157 ProteinModelPortal:Q6P2H8 STRING:Q6P2H8
PhosphoSite:Q6P2H8 DMDM:74758243 PRIDE:Q6P2H8 DNASU:79639
Ensembl:ENST00000372237 GeneID:79639 KEGG:hsa:79639 UCSC:uc001cmc.3
GeneCards:GC01M045100 HGNC:HGNC:26186 HPA:HPA021134
neXtProt:NX_Q6P2H8 PharmGKB:PA142670769 InParanoid:Q6P2H8
PhylomeDB:Q6P2H8 GenomeRNAi:79639 NextBio:68757 ArrayExpress:Q6P2H8
Bgee:Q6P2H8 CleanEx:HS_TMEM53 Genevestigator:Q6P2H8 Uniprot:Q6P2H8
Length = 277
Score = 113 (44.8 bits), Expect = 3.0e-07, Sum P(2) = 3.0e-07
Identities = 40/136 (29%), Positives = 66/136 (48%)
Query: 6 VVLLGWLGARRKHLRRYVEWYNSRGINAITFVVEAKELLSFDLGRGVEKRIADLSNEIVS 65
V+LLGW G + K+L +Y Y+ RG I + ++ F G+ + L+ +++
Sbjct: 38 VILLGWGGCKDKNLAKYSAIYHKRGCIVIRYTAPW-HMVFFSESLGIPS-LRVLAQKLLE 95
Query: 66 WVSHEEQDGKQRCLIFHTFSNTGWFVCGSILASLQGREDLMQKIKGLIVDSGGAGAFDPK 125
+ E + + L+FH FSN G + +L LQ R ++ G I DS A
Sbjct: 96 LLFDYEIEKEP--LLFHVFSNGGVMLYRYVLELLQTRRFCRLRVVGTIFDS--APGDSNL 151
Query: 126 VWAGGFGAAILKKRSS 141
V A AAIL++R++
Sbjct: 152 VGALRALAAILERRAA 167
Score = 65 (27.9 bits), Expect = 3.0e-07, Sum P(2) = 3.0e-07
Identities = 21/55 (38%), Positives = 30/55 (54%)
Query: 212 PHLYLYSTGDKVIPYQSVELLIEEQ---RKTGRKV-F--SVILGHL---PTWITS 257
P LYLYS D+V+ + +E ++E + R R V F S + HL PT+ TS
Sbjct: 211 PELYLYSRADEVVLARDIERMVEARLARRVLARSVDFVSSAHVSHLRDYPTYYTS 265
>DICTYBASE|DDB_G0285447 [details] [associations]
symbol:DDB_G0285447 "DUF829 family protein"
species:44689 "Dictyostelium discoideum" [GO:0008150
"biological_process" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] dictyBase:DDB_G0285447 EMBL:AAFI02000079
InterPro:IPR008547 PANTHER:PTHR12265 Pfam:PF05705
RefSeq:XP_638058.1 EnsemblProtists:DDB0238660 GeneID:8625104
KEGG:ddi:DDB_G0285447 eggNOG:NOG241330 OMA:KERPNCD
ProtClustDB:CLSZ2430163 Uniprot:Q54N85
Length = 305
Score = 121 (47.7 bits), Expect = 5.1e-07, Sum P(2) = 5.1e-07
Identities = 36/147 (24%), Positives = 76/147 (51%)
Query: 7 VLLGWLGARRKHLRRYVEWYNSRGINAITFVVEAKELLSFDLGRGVEKRIADLSNEIVSW 66
++LGW+G+ +K L +Y+ + SRG N ++ + E L+ G+ + + +I ++
Sbjct: 64 IVLGWMGSTQKLLLKYINLWTSRGFNTFSYRADYFETLAI---LGLRLKAMHMLKQISTY 120
Query: 67 VSHEEQDGKQRC--LIFHTFSNTGWFVCGSILASLQGRED---LMQKIKGLIVDSGGAGA 121
+ + C +IFH FSN G F+ +++ + ++ + IKG+++DS
Sbjct: 121 LKE-----RPNCDTIIFHIFSNGGGFLYWALIEFMLANDEYKFIHPMIKGVVMDS--LPT 173
Query: 122 F-DPKVWAGGFGAAILKKRSSSAYSTV 147
F + +++ G + A S +AY+T+
Sbjct: 174 FTNTQLFTGFWSLAKPMGGSLAAYATL 200
Score = 55 (24.4 bits), Expect = 5.1e-07, Sum P(2) = 5.1e-07
Identities = 15/42 (35%), Positives = 21/42 (50%)
Query: 213 HLYLYSTGDKVIPYQSVELLIEEQRKTGRKVFSVILGHLPTW 254
H LYST DK+IP VE + ++ R +I H+ W
Sbjct: 227 HTVLYSTDDKLIPGAEVEAFLVRLKQNIRN--DLI--HVQKW 264
>MGI|MGI:1916027 [details] [associations]
symbol:Tmem53 "transmembrane protein 53" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] MGI:MGI:1916027 GO:GO:0016021
EMBL:AL671866 EMBL:AL844169 CTD:79639 eggNOG:NOG241561
GeneTree:ENSGT00390000000715 HOGENOM:HOG000230532
HOVERGEN:HBG056173 OrthoDB:EOG43JC5B InterPro:IPR008547
PANTHER:PTHR12265 Pfam:PF05705 OMA:MLYRYIV EMBL:AK004164
EMBL:AK005885 EMBL:BC019937 EMBL:BC020121 IPI:IPI00268509
IPI:IPI00648093 IPI:IPI00649630 RefSeq:NP_081113.1
UniGene:Mm.331805 ProteinModelPortal:Q9D0Z3 PhosphoSite:Q9D0Z3
PaxDb:Q9D0Z3 PRIDE:Q9D0Z3 Ensembl:ENSMUST00000062824
Ensembl:ENSMUST00000106433 Ensembl:ENSMUST00000106434
Ensembl:ENSMUST00000125943 GeneID:68777 KEGG:mmu:68777
UCSC:uc008uii.1 UCSC:uc008uij.1 UCSC:uc008uik.1 NextBio:327910
Bgee:Q9D0Z3 CleanEx:MM_TMEM53 Genevestigator:Q9D0Z3 Uniprot:Q9D0Z3
Length = 276
Score = 107 (42.7 bits), Expect = 6.1e-07, Sum P(2) = 6.1e-07
Identities = 32/113 (28%), Positives = 54/113 (47%)
Query: 6 VVLLGWLGARRKHLRRYVEWYNSRGINAITFVVEAKELLSFDLGRGVEKRIADLSNEIVS 65
V+LLGW G R K+L +Y Y+ RG I + ++ F G+ + ++ +++
Sbjct: 36 VILLGWGGCRDKNLAKYSAIYHKRGCIVIRYTAPW-HMVFFSESLGIPS-LRVIAQKLLE 93
Query: 66 WVSHEEQDGKQRCLIFHTFSNTGWFVCGSILASLQGREDLMQ-KIKGLIVDSG 117
+ E + + L+FH FSN G + +L LQ + + G I DSG
Sbjct: 94 LLFDYEIEREP--LLFHVFSNAGVMLYRYVLELLQTHQRFRHLHVVGTIFDSG 144
Score = 69 (29.3 bits), Expect = 6.1e-07, Sum P(2) = 6.1e-07
Identities = 19/78 (24%), Positives = 40/78 (51%)
Query: 160 SVSMMQDKEPDIIETMLLS---LLEKLFSYIINLPDVNQRIKKVVSAVTNNPPACPHLYL 216
+++ + ++ P ++ +LL+ L+ LF +++ P + ++ P LYL
Sbjct: 156 ALATILERRPAVLRLLLLAAFALVVILFHFLL-APFTALFHTHFYDRLQDSGSCWPELYL 214
Query: 217 YSTGDKVIPYQSVELLIE 234
YS DKV+ + VE ++E
Sbjct: 215 YSRADKVVSARDVERMVE 232
>UNIPROTKB|Q2TBP5 [details] [associations]
symbol:TMEM53 "Transmembrane protein 53" species:9913 "Bos
taurus" [GO:0016021 "integral to membrane" evidence=IEA]
GO:GO:0016021 EMBL:BC109854 IPI:IPI00685731 RefSeq:NP_001033661.1
UniGene:Bt.25881 Ensembl:ENSBTAT00000016415 GeneID:540738
KEGG:bta:540738 CTD:79639 eggNOG:NOG241561
GeneTree:ENSGT00390000000715 HOGENOM:HOG000230532
HOVERGEN:HBG056173 InParanoid:Q2TBP5 OMA:CTVIRYT OrthoDB:EOG43JC5B
NextBio:20878806 InterPro:IPR008547 PANTHER:PTHR12265 Pfam:PF05705
Uniprot:Q2TBP5
Length = 294
Score = 105 (42.0 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 32/113 (28%), Positives = 54/113 (47%)
Query: 6 VVLLGWLGARRKHLRRYVEWYNSRGINAITFVVEAKELLSFDLGRGVEKRIADLSNEIVS 65
V+LLGW G K+L +Y Y+ RG I + ++ F G+ + L+ +++
Sbjct: 38 VILLGWGGCSDKNLAKYSAIYHKRGCIVIRYTAPW-HMVFFSETLGIPS-LRVLAQKLLE 95
Query: 66 WVSHEEQDGKQRCLIFHTFSNTGWFVCGSILASLQGREDLMQ-KIKGLIVDSG 117
+ E + + L+FH FSN G + +L LQ + ++ G I DSG
Sbjct: 96 LLFDYEVEKEP--LLFHVFSNAGVMLYRYVLELLQTHQRFCHLRVVGTIFDSG 146
Score = 59 (25.8 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 11/23 (47%), Positives = 16/23 (69%)
Query: 212 PHLYLYSTGDKVIPYQSVELLIE 234
P LYLYS D+V+ + VE ++E
Sbjct: 212 PELYLYSRADEVVLARDVERMVE 234
>WB|WBGene00020402 [details] [associations]
symbol:T10B11.6.2 species:6239 "Caenorhabditis elegans"
[GO:0071688 "striated muscle myosin thick filament assembly"
evidence=IMP] [GO:0005739 "mitochondrion" evidence=IDA]
GO:GO:0071688 EMBL:FO080731 eggNOG:NOG241561
GeneTree:ENSGT00390000000715 OMA:CTVIRYT InterPro:IPR008547
PANTHER:PTHR12265 Pfam:PF05705 PIR:T33520 RefSeq:NP_491980.1
ProteinModelPortal:Q9TZH8 DIP:DIP-25915N IntAct:Q9TZH8
MINT:MINT-1118603 PaxDb:Q9TZH8 EnsemblMetazoa:T10B11.6.1
EnsemblMetazoa:T10B11.6.2 GeneID:172424 KEGG:cel:CELE_T10B11.6
UCSC:T10B11.6 CTD:172424 WormBase:T10B11.6 HOGENOM:HOG000017246
InParanoid:Q9TZH8 NextBio:875455 Uniprot:Q9TZH8
Length = 325
Score = 90 (36.7 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 29/123 (23%), Positives = 55/123 (44%)
Query: 1 ETAVTVVLLGWLGARRKHLRRYVEWYNSRGINAITFVVEAKELLSFDLGRGVEKRIADLS 60
E ++++GW GA KH+ +Y++ YN G ++ + + R+
Sbjct: 66 EKKPVILMVGWAGANPKHIDKYIKVYNDEGYRVVSL---CPPCYHYSIPNS---RVGFYM 119
Query: 61 NEIVSWVSHEEQDGKQ--RC-LIFHTFSNTGWFVCGSIL----ASLQGREDLMQKIKGLI 113
+ + + + D + +C +I H+FS G V G I + + L ++IKG+I
Sbjct: 120 SPLFRAIDAKPGDFRSFAKCPIIVHSFSMNG--VRGLISFWKWTEAEEKPQLRERIKGII 177
Query: 114 VDS 116
DS
Sbjct: 178 FDS 180
Score = 68 (29.0 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 14/33 (42%), Positives = 21/33 (63%)
Query: 214 LYLYSTGDKVIPYQSVELLIEEQRKTGRKVFSV 246
LYLYS D +I + VE IE+Q++ G V ++
Sbjct: 259 LYLYSKADTMIKAKHVEKFIEKQKEKGNSVTAI 291
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.319 0.136 0.404 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 271 271 0.00098 114 3 11 22 0.49 33
32 0.40 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 10
No. of states in DFA: 616 (65 KB)
Total size of DFA: 197 KB (2111 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 23.97u 0.18s 24.15t Elapsed: 00:00:01
Total cpu time: 23.97u 0.18s 24.15t Elapsed: 00:00:01
Start: Thu May 9 18:17:15 2013 End: Thu May 9 18:17:16 2013