Query 045563
Match_columns 271
No_of_seqs 109 out of 368
Neff 7.8
Searched_HMMs 46136
Date Fri Mar 29 03:20:37 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/045563.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/045563hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PF05705 DUF829: Eukaryotic pr 100.0 4.3E-50 9.4E-55 352.0 22.4 227 4-270 1-230 (240)
2 KOG2521 Uncharacterized conser 100.0 8.2E-30 1.8E-34 231.7 9.8 235 3-270 39-277 (350)
3 PRK05077 frsA fermentation/res 98.2 0.00021 4.5E-09 67.8 18.5 109 1-120 192-301 (414)
4 PF12697 Abhydrolase_6: Alpha/ 98.1 0.00024 5.2E-09 58.9 15.8 103 5-121 1-103 (228)
5 PRK13604 luxD acyl transferase 98.1 0.00014 3E-09 66.1 15.0 197 4-253 39-243 (307)
6 PF00326 Peptidase_S9: Prolyl 98.1 0.00034 7.3E-09 59.7 16.2 46 209-254 143-188 (213)
7 PRK10566 esterase; Provisional 98.0 0.00074 1.6E-08 58.6 18.0 45 210-254 186-232 (249)
8 PF12695 Abhydrolase_5: Alpha/ 98.0 0.00037 8E-09 54.9 14.4 144 4-253 1-144 (145)
9 PRK11460 putative hydrolase; P 97.9 0.0012 2.6E-08 57.6 17.2 47 210-256 148-194 (232)
10 PHA02857 monoglyceride lipase; 97.8 0.0017 3.6E-08 57.3 16.3 43 208-253 207-249 (276)
11 PF02230 Abhydrolase_2: Phosph 97.8 0.001 2.2E-08 57.2 14.4 46 210-255 155-200 (216)
12 PF01738 DLH: Dienelactone hyd 97.7 0.002 4.4E-08 55.1 15.4 44 210-253 145-188 (218)
13 PLN02511 hydrolase 97.6 0.0024 5.2E-08 60.0 15.8 48 209-267 297-344 (388)
14 TIGR01250 pro_imino_pep_2 prol 97.6 0.013 2.7E-07 50.7 18.5 106 2-119 25-131 (288)
15 TIGR01738 bioH putative pimelo 97.6 0.0041 8.8E-08 52.3 14.8 42 208-253 186-227 (245)
16 PRK10749 lysophospholipase L2; 97.5 0.017 3.8E-07 52.7 19.6 46 208-253 257-305 (330)
17 PRK14875 acetoin dehydrogenase 97.5 0.0061 1.3E-07 56.0 16.5 104 2-121 131-234 (371)
18 COG1506 DAP2 Dipeptidyl aminop 97.5 0.0015 3.3E-08 65.1 12.6 180 19-257 412-598 (620)
19 TIGR02427 protocat_pcaD 3-oxoa 97.4 0.011 2.4E-07 49.7 15.3 41 209-253 192-232 (251)
20 COG1647 Esterase/lipase [Gener 97.4 0.016 3.4E-07 50.2 15.8 204 2-256 15-225 (243)
21 PLN02652 hydrolase; alpha/beta 97.4 0.0076 1.7E-07 56.9 15.2 43 209-253 323-365 (395)
22 PRK10985 putative hydrolase; P 97.3 0.047 1E-06 49.8 19.3 107 3-120 59-169 (324)
23 COG0412 Dienelactone hydrolase 97.2 0.033 7.2E-07 48.8 16.9 45 209-253 157-201 (236)
24 PLN02298 hydrolase, alpha/beta 97.2 0.039 8.4E-07 50.2 17.5 43 209-253 250-292 (330)
25 COG0429 Predicted hydrolase of 97.1 0.015 3.3E-07 53.1 13.6 230 3-266 76-319 (345)
26 TIGR02821 fghA_ester_D S-formy 97.0 0.067 1.5E-06 47.6 17.0 44 210-253 211-255 (275)
27 TIGR03100 hydr1_PEP hydrolase, 97.0 0.18 3.9E-06 44.8 19.5 107 2-120 26-135 (274)
28 COG0400 Predicted esterase [Ge 97.0 0.022 4.8E-07 49.0 12.8 43 210-253 146-188 (207)
29 PLN02442 S-formylglutathione h 96.9 0.078 1.7E-06 47.5 16.2 45 209-253 216-261 (283)
30 TIGR03611 RutD pyrimidine util 96.8 0.098 2.1E-06 44.4 15.5 41 209-253 197-237 (257)
31 COG2267 PldB Lysophospholipase 96.8 0.057 1.2E-06 49.0 14.5 44 208-253 226-270 (298)
32 PLN02385 hydrolase; alpha/beta 96.7 0.2 4.3E-06 46.0 17.9 45 209-255 278-322 (349)
33 PF06500 DUF1100: Alpha/beta h 96.7 0.012 2.7E-07 55.4 9.8 110 1-121 188-298 (411)
34 TIGR03343 biphenyl_bphD 2-hydr 96.7 0.18 4E-06 44.1 16.8 41 209-253 222-262 (282)
35 PRK03592 haloalkane dehalogena 96.6 0.11 2.4E-06 46.2 15.0 102 2-119 27-128 (295)
36 TIGR01607 PST-A Plasmodium sub 96.5 0.31 6.7E-06 44.7 17.7 44 208-253 268-311 (332)
37 PLN02824 hydrolase, alpha/beta 96.4 0.41 8.8E-06 42.5 17.6 103 2-118 29-136 (294)
38 TIGR01838 PHA_synth_I poly(R)- 96.4 0.96 2.1E-05 44.5 21.3 41 209-253 414-454 (532)
39 PLN02679 hydrolase, alpha/beta 96.4 0.85 1.8E-05 42.2 20.0 45 209-253 291-336 (360)
40 PRK10162 acetyl esterase; Prov 96.3 0.67 1.4E-05 42.2 18.7 41 211-253 249-289 (318)
41 TIGR01836 PHA_synth_III_C poly 96.3 0.26 5.7E-06 45.3 16.2 42 209-253 285-326 (350)
42 PRK03204 haloalkane dehalogena 96.3 0.65 1.4E-05 41.4 18.2 102 3-119 35-136 (286)
43 PLN02211 methyl indole-3-aceta 96.3 0.29 6.3E-06 43.5 15.8 102 3-117 19-120 (273)
44 KOG1838 Alpha/beta hydrolase [ 96.3 0.32 6.9E-06 45.9 16.3 106 3-119 126-236 (409)
45 TIGR03695 menH_SHCHC 2-succiny 96.2 0.48 1E-05 39.4 16.1 102 3-118 2-104 (251)
46 PRK10673 acyl-CoA esterase; Pr 96.2 0.68 1.5E-05 39.7 17.3 41 209-253 194-234 (255)
47 PLN02894 hydrolase, alpha/beta 96.1 0.89 1.9E-05 42.9 18.8 106 3-121 106-213 (402)
48 PRK00870 haloalkane dehalogena 96.1 0.38 8.3E-06 43.0 15.7 101 3-116 47-147 (302)
49 PRK11071 esterase YqiA; Provis 96.1 0.21 4.6E-06 42.1 13.2 38 209-253 135-172 (190)
50 PRK10349 carboxylesterase BioH 96.0 0.91 2E-05 39.2 17.3 98 2-120 13-111 (256)
51 TIGR01249 pro_imino_pep_1 prol 95.9 0.61 1.3E-05 41.9 16.4 40 210-253 248-287 (306)
52 PF07859 Abhydrolase_3: alpha/ 95.8 0.39 8.4E-06 40.3 13.8 40 212-253 168-207 (211)
53 PLN03087 BODYGUARD 1 domain co 95.8 0.89 1.9E-05 44.1 17.6 49 209-269 417-465 (481)
54 KOG2382 Predicted alpha/beta h 95.8 1.5 3.2E-05 40.1 17.7 222 2-254 52-293 (315)
55 PLN02965 Probable pheophorbida 95.8 0.99 2.1E-05 39.2 16.5 104 2-118 3-106 (255)
56 COG3545 Predicted esterase of 95.8 0.23 5E-06 41.5 11.5 146 1-239 1-146 (181)
57 PLN02578 hydrolase 95.5 1.7 3.6E-05 40.1 17.8 40 209-253 295-334 (354)
58 PRK10115 protease 2; Provision 94.8 0.61 1.3E-05 47.3 13.6 44 210-253 605-652 (686)
59 PRK05855 short chain dehydroge 94.7 0.48 1E-05 46.0 12.1 84 3-92 26-109 (582)
60 PF03583 LIP: Secretory lipase 93.8 0.16 3.6E-06 45.8 6.4 48 206-253 215-263 (290)
61 TIGR01840 esterase_phb esteras 93.2 4.6 0.0001 34.1 15.1 30 210-239 167-197 (212)
62 PRK11126 2-succinyl-6-hydroxy- 92.9 1.2 2.6E-05 37.9 10.0 102 2-120 2-103 (242)
63 cd00707 Pancreat_lipase_like P 91.1 2.1 4.4E-05 38.3 9.7 93 2-99 36-133 (275)
64 PF10503 Esterase_phd: Esteras 91.0 9.8 0.00021 33.0 14.6 30 210-239 169-198 (220)
65 TIGR03101 hydr2_PEP hydrolase, 90.7 2.6 5.7E-05 37.6 10.0 51 211-261 201-253 (266)
66 TIGR01839 PHA_synth_II poly(R) 90.6 19 0.00042 35.7 18.2 50 210-264 441-490 (560)
67 PLN02980 2-oxoglutarate decarb 90.5 21 0.00045 40.2 18.5 106 3-121 1372-1483(1655)
68 KOG4391 Predicted alpha/beta h 87.1 11 0.00023 33.1 10.6 183 4-253 80-262 (300)
69 PF08840 BAAT_C: BAAT / Acyl-C 86.4 1.1 2.4E-05 38.5 4.4 48 210-257 115-165 (213)
70 PRK06765 homoserine O-acetyltr 85.1 2 4.4E-05 40.5 5.9 50 209-266 322-372 (389)
71 PF00561 Abhydrolase_1: alpha/ 84.6 0.93 2E-05 37.7 3.1 42 208-253 173-214 (230)
72 PLN02872 triacylglycerol lipas 84.5 1.2 2.5E-05 42.2 4.0 46 205-253 320-365 (395)
73 PRK00175 metX homoserine O-ace 84.3 2.1 4.6E-05 39.9 5.6 45 209-253 308-353 (379)
74 COG3208 GrsT Predicted thioest 83.9 30 0.00064 30.6 14.6 205 2-253 6-215 (244)
75 TIGR03056 bchO_mg_che_rel puta 83.5 2 4.4E-05 37.0 4.9 41 209-253 219-259 (278)
76 KOG3043 Predicted hydrolase re 81.4 3.4 7.4E-05 36.0 5.3 44 210-253 164-208 (242)
77 PRK07581 hypothetical protein; 79.3 2.6 5.7E-05 38.3 4.2 49 209-269 274-323 (339)
78 TIGR02240 PHA_depoly_arom poly 78.5 12 0.00026 32.7 8.1 40 209-253 206-245 (276)
79 TIGR01392 homoserO_Ac_trn homo 77.4 5.3 0.00011 36.6 5.7 45 209-253 287-332 (351)
80 PF05990 DUF900: Alpha/beta hy 76.4 37 0.0008 29.5 10.4 117 3-122 19-139 (233)
81 TIGR02240 PHA_depoly_arom poly 73.7 5.1 0.00011 35.1 4.4 101 3-119 26-126 (276)
82 KOG2551 Phospholipase/carboxyh 73.6 4.7 0.0001 35.1 3.9 43 206-253 159-201 (230)
83 KOG2100 Dipeptidyl aminopeptid 73.3 6.8 0.00015 40.3 5.7 46 213-258 685-730 (755)
84 COG3243 PhaC Poly(3-hydroxyalk 72.9 6.8 0.00015 37.3 5.1 50 209-270 329-378 (445)
85 PLN03084 alpha/beta hydrolase 72.6 8.3 0.00018 36.3 5.7 41 208-253 323-363 (383)
86 COG0657 Aes Esterase/lipase [L 72.2 6.7 0.00015 35.2 4.9 42 210-253 245-286 (312)
87 PF00151 Lipase: Lipase; Inte 72.2 21 0.00045 32.9 8.2 94 3-101 72-173 (331)
88 PRK08775 homoserine O-acetyltr 71.4 3.4 7.3E-05 37.8 2.8 43 208-253 275-318 (343)
89 PF05677 DUF818: Chlamydia CHL 70.7 31 0.00066 32.2 8.7 94 22-121 163-257 (365)
90 COG4782 Uncharacterized protei 68.1 61 0.0013 30.4 10.1 111 5-120 119-234 (377)
91 PRK08775 homoserine O-acetyltr 67.9 14 0.00031 33.6 6.2 102 2-119 57-174 (343)
92 COG0596 MhpC Predicted hydrola 67.6 8.1 0.00018 31.5 4.1 101 4-120 23-124 (282)
93 PRK06489 hypothetical protein; 67.0 24 0.00052 32.4 7.5 41 209-253 291-337 (360)
94 PF06821 Ser_hydrolase: Serine 66.8 5.5 0.00012 33.0 2.9 92 5-120 1-92 (171)
95 TIGR03230 lipo_lipase lipoprot 66.7 75 0.0016 30.6 10.9 89 2-96 41-137 (442)
96 PF05057 DUF676: Putative seri 64.9 65 0.0014 27.5 9.3 91 4-99 6-100 (217)
97 KOG4667 Predicted esterase [Li 64.0 9 0.00019 33.5 3.6 51 200-254 189-239 (269)
98 PF02089 Palm_thioest: Palmito 61.6 58 0.0012 29.4 8.5 106 1-119 4-116 (279)
99 COG4099 Predicted peptidase [G 60.9 46 0.001 30.6 7.7 85 4-92 192-284 (387)
100 PLN00021 chlorophyllase 58.4 77 0.0017 28.9 9.0 82 3-92 53-141 (313)
101 COG3040 Blc Bacterial lipocali 57.7 21 0.00045 29.7 4.5 40 210-250 131-170 (174)
102 PF11144 DUF2920: Protein of u 56.7 20 0.00043 34.0 4.9 37 212-248 295-331 (403)
103 PF00975 Thioesterase: Thioest 56.6 68 0.0015 26.8 8.0 59 55-119 47-105 (229)
104 TIGR03056 bchO_mg_che_rel puta 53.7 1.1E+02 0.0023 26.0 8.9 82 3-92 29-110 (278)
105 KOG1454 Predicted hydrolase/ac 53.4 23 0.0005 32.5 4.8 44 210-265 264-307 (326)
106 COG2945 Predicted hydrolase of 51.3 17 0.00036 31.2 3.1 42 207-253 146-187 (210)
107 PF00561 Abhydrolase_1: alpha/ 50.7 28 0.00062 28.5 4.6 52 57-119 28-79 (230)
108 KOG1552 Predicted alpha/beta h 50.4 11 0.00025 33.4 2.1 41 210-253 192-232 (258)
109 PRK06489 hypothetical protein; 50.1 19 0.00042 33.0 3.7 108 2-119 69-190 (360)
110 KOG3253 Predicted alpha/beta h 48.1 33 0.00072 34.4 5.0 42 209-253 303-344 (784)
111 KOG2112 Lysophospholipase [Lip 46.8 30 0.00064 29.8 4.0 43 211-253 145-187 (206)
112 COG1073 Hydrolases of the alph 46.5 27 0.00058 30.0 3.9 41 211-253 233-273 (299)
113 PF00756 Esterase: Putative es 46.3 37 0.0008 29.0 4.7 38 54-92 93-130 (251)
114 PRK11126 2-succinyl-6-hydroxy- 46.2 27 0.00058 29.4 3.8 35 209-253 187-221 (242)
115 PF03959 FSH1: Serine hydrolas 42.8 44 0.00095 28.3 4.6 41 209-253 160-200 (212)
116 PRK07868 acyl-CoA synthetase; 42.2 49 0.0011 35.1 5.7 42 209-253 296-337 (994)
117 PF05448 AXE1: Acetyl xylan es 41.9 2.8E+02 0.006 25.4 14.4 42 209-253 261-302 (320)
118 PF08386 Abhydrolase_4: TAP-li 40.8 45 0.00098 24.9 3.9 40 210-253 34-73 (103)
119 PF08538 DUF1749: Protein of u 39.9 15 0.00033 33.5 1.3 109 5-121 35-150 (303)
120 KOG1455 Lysophospholipase [Lip 38.4 28 0.0006 31.8 2.7 44 208-253 244-287 (313)
121 PF01674 Lipase_2: Lipase (cla 37.8 1E+02 0.0022 26.6 6.1 86 2-92 1-90 (219)
122 PF10230 DUF2305: Uncharacteri 37.3 1.1E+02 0.0024 27.0 6.4 43 210-253 221-263 (266)
123 PRK10477 outer membrane lipopr 37.2 43 0.00093 27.7 3.6 38 210-248 134-171 (177)
124 TIGR01849 PHB_depoly_PhaZ poly 36.5 54 0.0012 31.2 4.4 43 211-253 339-382 (406)
125 KOG4178 Soluble epoxide hydrol 36.2 55 0.0012 30.1 4.3 44 209-255 257-301 (322)
126 KOG0538 Glycolate oxidase [Ene 34.7 71 0.0015 29.4 4.6 38 209-253 122-159 (363)
127 PF08212 Lipocalin_2: Lipocali 33.7 46 0.001 26.4 3.1 38 210-248 103-140 (143)
128 cd01467 vWA_BatA_type VWA BatA 33.3 2.2E+02 0.0048 22.8 7.2 41 210-250 102-142 (180)
129 COG0596 MhpC Predicted hydrola 32.7 2.5E+02 0.0055 22.3 8.9 42 209-253 220-261 (282)
130 PF08357 SEFIR: SEFIR domain; 32.7 45 0.00098 26.3 2.9 37 213-250 3-40 (150)
131 PLN02872 triacylglycerol lipas 32.2 1.3E+02 0.0028 28.5 6.2 38 3-40 75-117 (395)
132 PF04025 DUF370: Domain of unk 32.1 50 0.0011 23.5 2.7 34 228-261 25-66 (73)
133 COG1654 BirA Biotin operon rep 32.1 55 0.0012 23.6 2.9 21 226-246 33-53 (79)
134 PF11633 SUD-M: Single-strande 31.6 49 0.0011 26.5 2.8 44 210-263 67-110 (142)
135 TIGR00976 /NonD putative hydro 31.5 1.8E+02 0.004 28.5 7.5 106 2-120 21-133 (550)
136 PRK07868 acyl-CoA synthetase; 31.5 2.6E+02 0.0057 29.7 9.1 104 3-119 68-177 (994)
137 KOG2541 Palmitoyl protein thio 29.9 4.3E+02 0.0092 24.0 9.8 105 2-119 23-128 (296)
138 PLN03084 alpha/beta hydrolase 29.9 3.6E+02 0.0077 25.3 8.8 104 3-119 128-232 (383)
139 COG3411 Ferredoxin [Energy pro 28.7 64 0.0014 22.4 2.6 43 210-252 16-60 (64)
140 KOG2029 Uncharacterized conser 28.4 1.6E+02 0.0035 29.6 6.2 49 74-122 523-575 (697)
141 PF06309 Torsin: Torsin; Inte 28.1 1.3E+02 0.0027 23.9 4.6 38 57-97 35-74 (127)
142 cd01452 VWA_26S_proteasome_sub 27.6 3.7E+02 0.008 22.6 7.7 39 213-251 109-147 (187)
143 KOG2624 Triglyceride lipase-ch 27.3 67 0.0015 30.6 3.4 32 210-241 332-363 (403)
144 PF01764 Lipase_3: Lipase (cla 26.7 2.9E+02 0.0062 20.9 7.1 59 57-119 48-106 (140)
145 cd01462 VWA_YIEM_type VWA YIEM 26.0 3.1E+02 0.0068 21.2 7.7 42 211-253 95-137 (152)
146 PRK05371 x-prolyl-dipeptidyl a 25.2 1.8E+02 0.0039 30.2 6.3 45 208-253 453-497 (767)
147 cd00741 Lipase Lipase. Lipase 24.7 2.2E+02 0.0048 22.3 5.7 45 75-121 26-70 (153)
148 KOG1515 Arylacetamide deacetyl 24.4 1.4E+02 0.0031 27.6 4.9 48 210-267 267-315 (336)
149 KOG1553 Predicted alpha/beta h 23.9 1.2E+02 0.0027 28.5 4.3 38 75-120 309-346 (517)
150 KOG3325 Membrane coat complex 23.8 49 0.0011 27.1 1.6 28 216-243 83-110 (183)
151 KOG2825 Putative arsenite-tran 23.8 5.5E+02 0.012 23.2 9.8 40 213-253 226-270 (323)
152 KOG2963 RNA-binding protein re 23.3 1E+02 0.0022 28.8 3.6 32 2-33 134-165 (405)
153 PF12715 Abhydrolase_7: Abhydr 22.9 1.4E+02 0.0031 28.2 4.6 49 64-121 214-262 (390)
154 COG3509 LpqC Poly(3-hydroxybut 22.9 1.5E+02 0.0032 27.2 4.6 38 75-116 142-183 (312)
155 PF12834 Phage_int_SAM_2: Phag 22.6 72 0.0016 23.5 2.2 22 11-32 46-67 (91)
156 COG4757 Predicted alpha/beta h 22.3 5.6E+02 0.012 22.9 11.0 107 5-122 32-142 (281)
157 PF07485 DUF1529: Domain of Un 22.2 1.1E+02 0.0023 24.1 3.1 35 219-253 60-97 (123)
158 PF07819 PGAP1: PGAP1-like pro 21.6 5.2E+02 0.011 22.1 11.3 63 54-122 64-126 (225)
159 PF11055 Gsf2: Glucose signall 21.1 55 0.0012 30.5 1.5 21 7-27 230-250 (377)
160 cd00394 Clp_protease_like Case 21.0 1.7E+02 0.0036 23.3 4.3 42 75-119 28-70 (161)
161 PF10678 DUF2492: Protein of u 20.9 76 0.0016 22.9 1.9 37 78-115 36-72 (78)
162 PLN02606 palmitoyl-protein thi 20.6 6.6E+02 0.014 23.0 8.8 104 2-119 26-132 (306)
163 PF11032 ApoM: Apolipoprotein 20.3 1.9E+02 0.0041 24.5 4.5 32 210-242 140-171 (186)
164 KOG1454 Predicted hydrolase/ac 20.3 2.2E+02 0.0048 26.0 5.4 80 2-91 58-142 (326)
165 COG0041 PurE Phosphoribosylcar 20.2 1.3E+02 0.0027 24.8 3.2 28 226-253 43-70 (162)
No 1
>PF05705 DUF829: Eukaryotic protein of unknown function (DUF829); InterPro: IPR008547 This signature identifies Transmembrane protein 53, that have no known function but are predicted to be integral membrane proteins.
Probab=100.00 E-value=4.3e-50 Score=352.03 Aligned_cols=227 Identities=31% Similarity=0.528 Sum_probs=172.9
Q ss_pred cEEEEEccCCCchHHHHHHHHHHhhCCcceEEEeecccceeecccchhhhhhHHHHHHHHHHhhcccccCCCCceEEEEe
Q 045563 4 VTVVLLGWLGARRKHLRRYVEWYNSRGINAITFVVEAKELLSFDLGRGVEKRIADLSNEIVSWVSHEEQDGKQRCLIFHT 83 (271)
Q Consensus 4 ~lVvl~gW~ga~~khl~KY~~~Y~~~g~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~l~~~~~~~~~~~il~H~ 83 (271)
|||||||||||++|||+||+++|++.|++++++.+++.+++++. +.++++++.+++.+.+..+. ..++|+||+
T Consensus 1 plvvl~gW~gA~~~hl~KY~~~Y~~~g~~il~~~~~~~~~~~~~------~~~~~~~~~l~~~l~~~~~~-~~~~il~H~ 73 (240)
T PF05705_consen 1 PLVVLLGWMGAKPKHLAKYSDLYQDPGFDILLVTSPPADFFWPS------KRLAPAADKLLELLSDSQSA-SPPPILFHS 73 (240)
T ss_pred CEEEEEeCCCCCHHHHHHHHHHHHhcCCeEEEEeCCHHHHeeec------cchHHHHHHHHHHhhhhccC-CCCCEEEEE
Confidence 79999999999999999999999999999999999999999876 35678888888888765432 235999999
Q ss_pred cccchHHHHHHHHHHhcCC---CCccCCeeEEEEeCCCCCCCChhhhhhhhhhhhhcccccccccccccCcccccccccc
Q 045563 84 FSNTGWFVCGSILASLQGR---EDLMQKIKGLIVDSGGAGAFDPKVWAGGFGAAILKKRSSSAYSTVEDGKINGLEGQVS 160 (271)
Q Consensus 84 FSnGG~~~~~~l~~~l~~~---~~~~~~i~g~I~DS~Pg~~~~~~~~~~g~~~a~l~~~~~~~~~~~~~~~l~~~~~~~~ 160 (271)
|||||++++.++++.+++. +.+.++++|+|||||||.+.. .....+++++ +++...
T Consensus 74 FSnGG~~~~~~l~~~~~~~~~~~~~~~~i~g~I~DS~P~~~~~-~~~~~~~~~~-~~~~~~------------------- 132 (240)
T PF05705_consen 74 FSNGGSFLYSQLLEAYQSRKKFGKLLPRIKGIIFDSCPGIPTY-SSSARAFSAA-LPKSSP------------------- 132 (240)
T ss_pred EECchHHHHHHHHHHHHhcccccccccccceeEEeCCCCcccc-ccHHHHHHHH-cCccch-------------------
Confidence 9999999999999888862 456667999999999998863 1222333333 222100
Q ss_pred cccccCCchHHHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHhhcCCCCCCeEEEecCCCCcCChhHHHHHHHHHHHcC
Q 045563 161 VSMMQDKEPDIIETMLLSLLEKLFSYIINLPDVNQRIKKVVSAVTNNPPACPHLYLYSTGDKVIPYQSVELLIEEQRKTG 240 (271)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~LyiYS~~D~li~~~~Ve~~~~~~r~~G 240 (271)
.+..+..+ .+..+ .... .........+.+....++.++.+...+.++|||||||++|++|+|+|||+|++++|++|
T Consensus 133 -~~~~~~~~-~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~lylYS~~D~l~~~~~ve~~~~~~~~~G 208 (240)
T PF05705_consen 133 -RWFVPLWP-LLQFL-LRLS-IISYFIFGYPDVQEYYRRALNDFANSPSRCPRLYLYSKADPLIPWRDVEEHAEEARRKG 208 (240)
T ss_pred -hhHHHHHH-HHHHH-HHHH-HHHHHHhcCCcHHHHHHHHHhhhhcCCCCCCeEEecCCCCcCcCHHHHHHHHHHHHHcC
Confidence 00000000 11111 1111 11112222455566677778888888889999999999999999999999999999999
Q ss_pred CcEEEEEcCCCCCCCCcCCccccccccCcC
Q 045563 241 RKVFSVILGHLPTWITSGLSPADTYRSYII 270 (271)
Q Consensus 241 ~~V~~~~f~~S~H~~~~~~~~v~H~r~~p~ 270 (271)
++|+.++|+||+| |+|+|+||+
T Consensus 209 ~~V~~~~f~~S~H--------V~H~r~~p~ 230 (240)
T PF05705_consen 209 WDVRAEKFEDSPH--------VAHLRKHPD 230 (240)
T ss_pred CeEEEecCCCCch--------hhhcccCHH
Confidence 9999999999999 999999996
No 2
>KOG2521 consensus Uncharacterized conserved protein [Function unknown]
Probab=99.96 E-value=8.2e-30 Score=231.74 Aligned_cols=235 Identities=22% Similarity=0.252 Sum_probs=153.2
Q ss_pred ccEEEEEccCCCchHHHHHHHHHHhhCCcceEEEeecccceeecccchhhhhhHHHHHHHHHHhhcccccCCCCceEEEE
Q 045563 3 AVTVVLLGWLGARRKHLRRYVEWYNSRGINAITFVVEAKELLSFDLGRGVEKRIADLSNEIVSWVSHEEQDGKQRCLIFH 82 (271)
Q Consensus 3 ~~lVvl~gW~ga~~khl~KY~~~Y~~~g~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~l~~~~~~~~~~~il~H 82 (271)
+|+|+++||+||.+|||+||.+.|++.|+.++.+++|....+++... ....+..+...+.+++++.. .++.||+||
T Consensus 39 k~Iv~~~gWag~~~r~l~ky~~~Yq~~g~~~~~~tap~~~~~~~~s~--~~~sl~~~~~~l~~L~~~~~--~~~~pi~fh 114 (350)
T KOG2521|consen 39 KPIVVLLGWAGAIDRNLMKYSKIYQDKGYIVVRITAPCPSVFLSASR--RILSLSLASTRLSELLSDYN--SDPCPIIFH 114 (350)
T ss_pred ccEEEEeeeccccchhHHHHHHHHhcCCceEEEecCccccccccccc--ccchhhHHHHHHHHHhhhcc--CCcCceEEE
Confidence 59999999999999999999999999999999999998877765542 12344556667777776654 358899999
Q ss_pred ecccchHHHHHHHHHHhcCC-CCccCCeeEEEEeCCCCCCCChh-hhhhhhhhhhhcccccccccccccCcccccccccc
Q 045563 83 TFSNTGWFVCGSILASLQGR-EDLMQKIKGLIVDSGGAGAFDPK-VWAGGFGAAILKKRSSSAYSTVEDGKINGLEGQVS 160 (271)
Q Consensus 83 ~FSnGG~~~~~~l~~~l~~~-~~~~~~i~g~I~DS~Pg~~~~~~-~~~~g~~~a~l~~~~~~~~~~~~~~~l~~~~~~~~ 160 (271)
+|||||+..+..+..+..+. +...+...|+||||||+.+..-+ .|+-.+.. .+.. .+....+..+.. ..
T Consensus 115 ~FS~ng~~~~~si~~~~~~~~~~~~~~~~~~~fdS~p~~~~~~~~~~a~~~~~--~~~~--~~~~~~~~~~~i-----~~ 185 (350)
T KOG2521|consen 115 VFSGNGVRLMYSISLQLIKHEPKAAQLSGGIIFDSAPARSSPVQLGWAVSFSS--PPDD--YVARWARLNYHI-----TL 185 (350)
T ss_pred EecCCceeehHHHHHHHhhcCchhHhhcCCceEeccccccchhhhcceecccc--Cchh--hHHHHHhcCeEE-----EE
Confidence 99999999998885555543 55566778899999999875111 11111100 0000 000000000000 00
Q ss_pred cccccCCchHHHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHhhcCC--CCCCeEEEecCCCCcCChhHHHHHHHHHHH
Q 045563 161 VSMMQDKEPDIIETMLLSLLEKLFSYIINLPDVNQRIKKVVSAVTNNP--PACPHLYLYSTGDKVIPYQSVELLIEEQRK 238 (271)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~p~LyiYS~~D~li~~~~Ve~~~~~~r~ 238 (271)
..+.. ++..... ++.... +....+...+.+.+.... ..+++||+||++|.|+|.++||++++..++
T Consensus 186 ~~~~~---~~~~~~~--------~~~~~~-~~~~~r~~~~~~r~~~~~~~~~~~~ly~~s~~d~v~~~~~ie~f~~~~~~ 253 (350)
T KOG2521|consen 186 LTMAG---NEGGAYL--------LGPLAE-KISMSRKYHFLDRYEEQRNELPWNQLYLYSDNDDVLPADEIEKFIALRRE 253 (350)
T ss_pred EEeee---cccchhh--------hhhhhh-ccccccchHHHHHHHhhhhcccccceeecCCccccccHHHHHHHHHHHHh
Confidence 00000 0000001 111100 000111112222222222 278999999999999999999999999999
Q ss_pred cCCcEEEEEcCCCCCCCCcCCccccccccCcC
Q 045563 239 TGRKVFSVILGHLPTWITSGLSPADTYRSYII 270 (271)
Q Consensus 239 ~G~~V~~~~f~~S~H~~~~~~~~v~H~r~~p~ 270 (271)
+|+.|..++|+||+| |+|+|+||.
T Consensus 254 ~g~~v~s~~~~ds~H--------~~h~r~~p~ 277 (350)
T KOG2521|consen 254 KGVNVKSVKFKDSEH--------VAHFRSFPK 277 (350)
T ss_pred cCceEEEeeccCccc--------eeeeccCcH
Confidence 999999999999999 999999995
No 3
>PRK05077 frsA fermentation/respiration switch protein; Reviewed
Probab=98.16 E-value=0.00021 Score=67.83 Aligned_cols=109 Identities=12% Similarity=0.095 Sum_probs=67.3
Q ss_pred CCccEEEEEccCCCch-HHHHHHHHHHhhCCcceEEEeecccceeecccchhhhhhHHHHHHHHHHhhcccccCCCCceE
Q 045563 1 ETAVTVVLLGWLGARR-KHLRRYVEWYNSRGINAITFVVEAKELLSFDLGRGVEKRIADLSNEIVSWVSHEEQDGKQRCL 79 (271)
Q Consensus 1 ~~~~lVvl~gW~ga~~-khl~KY~~~Y~~~g~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~l~~~~~~~~~~~i 79 (271)
+|.|+||++|+.++.. .+...+++...++|++++++-.|..-. ..... ...........+++++..... -+..+|
T Consensus 192 ~~~P~Vli~gG~~~~~~~~~~~~~~~La~~Gy~vl~~D~pG~G~-s~~~~--~~~d~~~~~~avld~l~~~~~-vd~~ri 267 (414)
T PRK05077 192 GPFPTVLVCGGLDSLQTDYYRLFRDYLAPRGIAMLTIDMPSVGF-SSKWK--LTQDSSLLHQAVLNALPNVPW-VDHTRV 267 (414)
T ss_pred CCccEEEEeCCcccchhhhHHHHHHHHHhCCCEEEEECCCCCCC-CCCCC--ccccHHHHHHHHHHHHHhCcc-cCcccE
Confidence 3679999999987743 455667778889999999998775311 11100 001122233455566544321 136799
Q ss_pred EEEecccchHHHHHHHHHHhcCCCCccCCeeEEEEeCCCCC
Q 045563 80 IFHTFSNTGWFVCGSILASLQGREDLMQKIKGLIVDSGGAG 120 (271)
Q Consensus 80 l~H~FSnGG~~~~~~l~~~l~~~~~~~~~i~g~I~DS~Pg~ 120 (271)
.+-.+|.||...+ .+... . ..+++++|..++|..
T Consensus 268 ~l~G~S~GG~~Al-~~A~~---~---p~ri~a~V~~~~~~~ 301 (414)
T PRK05077 268 AAFGFRFGANVAV-RLAYL---E---PPRLKAVACLGPVVH 301 (414)
T ss_pred EEEEEChHHHHHH-HHHHh---C---CcCceEEEEECCccc
Confidence 9999999996543 22111 1 247899999987753
No 4
>PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A ....
Probab=98.10 E-value=0.00024 Score=58.89 Aligned_cols=103 Identities=18% Similarity=0.196 Sum_probs=63.2
Q ss_pred EEEEEccCCCchHHHHHHHHHHhhCCcceEEEeecccceeecccchhhhhhHHHHHHHHHHhhcccccCCCCceEEEEec
Q 045563 5 TVVLLGWLGARRKHLRRYVEWYNSRGINAITFVVEAKELLSFDLGRGVEKRIADLSNEIVSWVSHEEQDGKQRCLIFHTF 84 (271)
Q Consensus 5 lVvl~gW~ga~~khl~KY~~~Y~~~g~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~l~~~~~~~~~~~il~H~F 84 (271)
||++-||.+.. ..-.+..+.. +.|++++.+..+..-.-..... .........++.+.++++... ..++++-..
T Consensus 1 vv~~hG~~~~~-~~~~~~~~~l-~~~~~v~~~d~~G~G~s~~~~~-~~~~~~~~~~~~l~~~l~~~~----~~~~~lvG~ 73 (228)
T PF12697_consen 1 VVFLHGFGGSS-ESWDPLAEAL-ARGYRVIAFDLPGHGRSDPPPD-YSPYSIEDYAEDLAELLDALG----IKKVILVGH 73 (228)
T ss_dssp EEEE-STTTTG-GGGHHHHHHH-HTTSEEEEEECTTSTTSSSHSS-GSGGSHHHHHHHHHHHHHHTT----TSSEEEEEE
T ss_pred eEEECCCCCCH-HHHHHHHHHH-hCCCEEEEEecCCccccccccc-cCCcchhhhhhhhhhcccccc----ccccccccc
Confidence 68999999877 4446666666 4799998888765311111000 001234556666666665432 368999999
Q ss_pred ccchHHHHHHHHHHhcCCCCccCCeeEEEEeCCCCCC
Q 045563 85 SNTGWFVCGSILASLQGREDLMQKIKGLIVDSGGAGA 121 (271)
Q Consensus 85 SnGG~~~~~~l~~~l~~~~~~~~~i~g~I~DS~Pg~~ 121 (271)
|.||...+ .++.. + ..+++++|+-+++...
T Consensus 74 S~Gg~~a~-~~a~~---~---p~~v~~~vl~~~~~~~ 103 (228)
T PF12697_consen 74 SMGGMIAL-RLAAR---Y---PDRVKGLVLLSPPPPL 103 (228)
T ss_dssp THHHHHHH-HHHHH---S---GGGEEEEEEESESSSH
T ss_pred cccccccc-ccccc---c---ccccccceeecccccc
Confidence 99996543 22222 1 2388999999888753
No 5
>PRK13604 luxD acyl transferase; Provisional
Probab=98.09 E-value=0.00014 Score=66.14 Aligned_cols=197 Identities=14% Similarity=0.150 Sum_probs=103.8
Q ss_pred cEEEEEccCCCchHHHHHHHHHHhhCCcceEEEeecc---c---ce--eecccchhhhhhHHHHHHHHHHhhcccccCCC
Q 045563 4 VTVVLLGWLGARRKHLRRYVEWYNSRGINAITFVVEA---K---EL--LSFDLGRGVEKRIADLSNEIVSWVSHEEQDGK 75 (271)
Q Consensus 4 ~lVvl~gW~ga~~khl~KY~~~Y~~~g~~~l~~~~~~---~---~~--~~~~~g~~~~~~~~~~~~~i~~~l~~~~~~~~ 75 (271)
.+|+..|..+ +..|..+|++...++|++++.+-... . ++ +..+.| ..++ ..+++++++. .
T Consensus 39 ~vIi~HGf~~-~~~~~~~~A~~La~~G~~vLrfD~rg~~GeS~G~~~~~t~s~g------~~Dl-~aaid~lk~~----~ 106 (307)
T PRK13604 39 TILIASGFAR-RMDHFAGLAEYLSSNGFHVIRYDSLHHVGLSSGTIDEFTMSIG------KNSL-LTVVDWLNTR----G 106 (307)
T ss_pred EEEEeCCCCC-ChHHHHHHHHHHHHCCCEEEEecCCCCCCCCCCccccCccccc------HHHH-HHHHHHHHhc----C
Confidence 3555566666 44679999999999999999997421 1 11 111112 1222 2224455442 2
Q ss_pred CceEEEEecccchHHHHHHHHHHhcCCCCccCCeeEEEEeCCCCCCCChhhhhhhhhhhhhcccccccccccccCccccc
Q 045563 76 QRCLIFHTFSNTGWFVCGSILASLQGREDLMQKIKGLIVDSGGAGAFDPKVWAGGFGAAILKKRSSSAYSTVEDGKINGL 155 (271)
Q Consensus 76 ~~~il~H~FSnGG~~~~~~l~~~l~~~~~~~~~i~g~I~DS~Pg~~~~~~~~~~g~~~a~l~~~~~~~~~~~~~~~l~~~ 155 (271)
..+|.++.+|+||... ++.+ . ..+++++|.||...... ..+...+.... ++.+ ... +
T Consensus 107 ~~~I~LiG~SmGgava---~~~A----~--~~~v~~lI~~sp~~~l~--d~l~~~~~~~~-~~~p-~~~-------l--- 163 (307)
T PRK13604 107 INNLGLIAASLSARIA---YEVI----N--EIDLSFLITAVGVVNLR--DTLERALGYDY-LSLP-IDE-------L--- 163 (307)
T ss_pred CCceEEEEECHHHHHH---HHHh----c--CCCCCEEEEcCCcccHH--HHHHHhhhccc-ccCc-ccc-------c---
Confidence 4579999999999753 1111 1 13588999998776542 22222221100 0000 000 0
Q ss_pred ccccccccccCCchHHHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHhhcCCCCCCeEEEecCCCCcCChhHHHHHHHH
Q 045563 156 EGQVSVSMMQDKEPDIIETMLLSLLEKLFSYIINLPDVNQRIKKVVSAVTNNPPACPHLYLYSTGDKVIPYQSVELLIEE 235 (271)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~LyiYS~~D~li~~~~Ve~~~~~ 235 (271)
|..+.+...-+.. ..++...+.+. +. ......+...+ ...|-|+|.|++|++||.+..+++.+.
T Consensus 164 ----------p~~~d~~g~~l~~--~~f~~~~~~~~-~~-~~~s~i~~~~~--l~~PvLiIHG~~D~lVp~~~s~~l~e~ 227 (307)
T PRK13604 164 ----------PEDLDFEGHNLGS--EVFVTDCFKHG-WD-TLDSTINKMKG--LDIPFIAFTANNDSWVKQSEVIDLLDS 227 (307)
T ss_pred ----------ccccccccccccH--HHHHHHHHhcC-cc-ccccHHHHHhh--cCCCEEEEEcCCCCccCHHHHHHHHHH
Confidence 0000000000000 01111110000 00 01111222222 258999999999999999999999998
Q ss_pred HHHcCCcEEEEEcCCCCC
Q 045563 236 QRKTGRKVFSVILGHLPT 253 (271)
Q Consensus 236 ~r~~G~~V~~~~f~~S~H 253 (271)
++. -+-+.+.++|+.|
T Consensus 228 ~~s--~~kkl~~i~Ga~H 243 (307)
T PRK13604 228 IRS--EQCKLYSLIGSSH 243 (307)
T ss_pred hcc--CCcEEEEeCCCcc
Confidence 664 4667788999999
No 6
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=98.06 E-value=0.00034 Score=59.66 Aligned_cols=46 Identities=22% Similarity=0.158 Sum_probs=42.8
Q ss_pred CCCCeEEEecCCCCcCChhHHHHHHHHHHHcCCcEEEEEcCCCCCC
Q 045563 209 PACPHLYLYSTGDKVIPYQSVELLIEEQRKTGRKVFSVILGHLPTW 254 (271)
Q Consensus 209 ~~~p~LyiYS~~D~li~~~~Ve~~~~~~r~~G~~V~~~~f~~S~H~ 254 (271)
...|.|.+++++|..||.+..+++++..++.|.+++...|++..|+
T Consensus 143 ~~~P~li~hG~~D~~Vp~~~s~~~~~~L~~~g~~~~~~~~p~~gH~ 188 (213)
T PF00326_consen 143 IKPPVLIIHGENDPRVPPSQSLRLYNALRKAGKPVELLIFPGEGHG 188 (213)
T ss_dssp GGSEEEEEEETTBSSSTTHHHHHHHHHHHHTTSSEEEEEETT-SSS
T ss_pred CCCCEEEEccCCCCccCHHHHHHHHHHHHhcCCCEEEEEcCcCCCC
Confidence 3689999999999999999999999999999999999999999993
No 7
>PRK10566 esterase; Provisional
Probab=98.02 E-value=0.00074 Score=58.62 Aligned_cols=45 Identities=18% Similarity=0.158 Sum_probs=40.9
Q ss_pred CCCeEEEecCCCCcCChhHHHHHHHHHHHcCC--cEEEEEcCCCCCC
Q 045563 210 ACPHLYLYSTGDKVIPYQSVELLIEEQRKTGR--KVFSVILGHLPTW 254 (271)
Q Consensus 210 ~~p~LyiYS~~D~li~~~~Ve~~~~~~r~~G~--~V~~~~f~~S~H~ 254 (271)
.+|.|.++++.|.++|+++.+++.+..++.|. +++.+.++++.|-
T Consensus 186 ~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~H~ 232 (249)
T PRK10566 186 DRPLLLWHGLADDVVPAAESLRLQQALRERGLDKNLTCLWEPGVRHR 232 (249)
T ss_pred CCCEEEEEcCCCCcCCHHHHHHHHHHHHhcCCCcceEEEecCCCCCc
Confidence 47999999999999999999999999999887 4888889999993
No 8
>PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A ....
Probab=98.00 E-value=0.00037 Score=54.93 Aligned_cols=144 Identities=18% Similarity=0.196 Sum_probs=95.7
Q ss_pred cEEEEEccCCCchHHHHHHHHHHhhCCcceEEEeecccceeecccchhhhhhHHHHHHHHHHhhcccccCCCCceEEEEe
Q 045563 4 VTVVLLGWLGARRKHLRRYVEWYNSRGINAITFVVEAKELLSFDLGRGVEKRIADLSNEIVSWVSHEEQDGKQRCLIFHT 83 (271)
Q Consensus 4 ~lVvl~gW~ga~~khl~KY~~~Y~~~g~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~l~~~~~~~~~~~il~H~ 83 (271)
++|++-||.+.+.. ...+.+...+.|+.++.+..+..... . .....+.+++.+. .+. .+..+|++-.
T Consensus 1 ~vv~~HG~~~~~~~-~~~~~~~l~~~G~~v~~~~~~~~~~~---~---~~~~~~~~~~~~~---~~~---~~~~~i~l~G 67 (145)
T PF12695_consen 1 VVVLLHGWGGSRRD-YQPLAEALAEQGYAVVAFDYPGHGDS---D---GADAVERVLADIR---AGY---PDPDRIILIG 67 (145)
T ss_dssp EEEEECTTTTTTHH-HHHHHHHHHHTTEEEEEESCTTSTTS---H---HSHHHHHHHHHHH---HHH---CTCCEEEEEE
T ss_pred CEEEECCCCCCHHH-HHHHHHHHHHCCCEEEEEecCCCCcc---c---hhHHHHHHHHHHH---hhc---CCCCcEEEEE
Confidence 57889999887554 67999999999999999976554221 1 1112233333322 111 1477999999
Q ss_pred cccchHHHHHHHHHHhcCCCCccCCeeEEEEeCCCCCCCChhhhhhhhhhhhhcccccccccccccCccccccccccccc
Q 045563 84 FSNTGWFVCGSILASLQGREDLMQKIKGLIVDSGGAGAFDPKVWAGGFGAAILKKRSSSAYSTVEDGKINGLEGQVSVSM 163 (271)
Q Consensus 84 FSnGG~~~~~~l~~~l~~~~~~~~~i~g~I~DS~Pg~~~~~~~~~~g~~~a~l~~~~~~~~~~~~~~~l~~~~~~~~~~~ 163 (271)
+|+||...+.... . . .+++++|+-+.. +. .. . +
T Consensus 68 ~S~Gg~~a~~~~~-~-----~--~~v~~~v~~~~~--~~-----~~----~-~--------------------------- 100 (145)
T PF12695_consen 68 HSMGGAIAANLAA-R-----N--PRVKAVVLLSPY--PD-----SE----D-L--------------------------- 100 (145)
T ss_dssp ETHHHHHHHHHHH-H-----S--TTESEEEEESES--SG-----CH----H-H---------------------------
T ss_pred EccCcHHHHHHhh-h-----c--cceeEEEEecCc--cc-----hh----h-h---------------------------
Confidence 9999975543322 1 1 578888888762 10 00 0 0
Q ss_pred ccCCchHHHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHhhcCCCCCCeEEEecCCCCcCChhHHHHHHHHHHHcCCcE
Q 045563 164 MQDKEPDIIETMLLSLLEKLFSYIINLPDVNQRIKKVVSAVTNNPPACPHLYLYSTGDKVIPYQSVELLIEEQRKTGRKV 243 (271)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~LyiYS~~D~li~~~~Ve~~~~~~r~~G~~V 243 (271)
.....|.++++++.|.+++.++++++.+..+ .+.
T Consensus 101 -------------------------------------------~~~~~pv~~i~g~~D~~~~~~~~~~~~~~~~---~~~ 134 (145)
T PF12695_consen 101 -------------------------------------------AKIRIPVLFIHGENDPLVPPEQVRRLYEALP---GPK 134 (145)
T ss_dssp -------------------------------------------TTTTSEEEEEEETT-SSSHHHHHHHHHHHHC---SSE
T ss_pred -------------------------------------------hccCCcEEEEEECCCCcCCHHHHHHHHHHcC---CCc
Confidence 0113489999999999999999999887777 578
Q ss_pred EEEEcCCCCC
Q 045563 244 FSVILGHLPT 253 (271)
Q Consensus 244 ~~~~f~~S~H 253 (271)
+...++++.|
T Consensus 135 ~~~~i~g~~H 144 (145)
T PF12695_consen 135 ELYIIPGAGH 144 (145)
T ss_dssp EEEEETTS-T
T ss_pred EEEEeCCCcC
Confidence 8899999999
No 9
>PRK11460 putative hydrolase; Provisional
Probab=97.91 E-value=0.0012 Score=57.59 Aligned_cols=47 Identities=21% Similarity=0.065 Sum_probs=43.2
Q ss_pred CCCeEEEecCCCCcCChhHHHHHHHHHHHcCCcEEEEEcCCCCCCCC
Q 045563 210 ACPHLYLYSTGDKVIPYQSVELLIEEQRKTGRKVFSVILGHLPTWIT 256 (271)
Q Consensus 210 ~~p~LyiYS~~D~li~~~~Ve~~~~~~r~~G~~V~~~~f~~S~H~~~ 256 (271)
..|.+.+++++|++||++..++..+..++.|.+|+.+.+++..|.++
T Consensus 148 ~~pvli~hG~~D~vvp~~~~~~~~~~L~~~g~~~~~~~~~~~gH~i~ 194 (232)
T PRK11460 148 ATTIHLIHGGEDPVIDVAHAVAAQEALISLGGDVTLDIVEDLGHAID 194 (232)
T ss_pred CCcEEEEecCCCCccCHHHHHHHHHHHHHCCCCeEEEEECCCCCCCC
Confidence 46899999999999999999999999999999999999999999543
No 10
>PHA02857 monoglyceride lipase; Provisional
Probab=97.79 E-value=0.0017 Score=57.30 Aligned_cols=43 Identities=12% Similarity=0.050 Sum_probs=36.5
Q ss_pred CCCCCeEEEecCCCCcCChhHHHHHHHHHHHcCCcEEEEEcCCCCC
Q 045563 208 PPACPHLYLYSTGDKVIPYQSVELLIEEQRKTGRKVFSVILGHLPT 253 (271)
Q Consensus 208 ~~~~p~LyiYS~~D~li~~~~Ve~~~~~~r~~G~~V~~~~f~~S~H 253 (271)
...+|.|.+.++.|.++|.+..+++.+..+. +++.+.++++.|
T Consensus 207 ~i~~Pvliv~G~~D~i~~~~~~~~l~~~~~~---~~~~~~~~~~gH 249 (276)
T PHA02857 207 KIKTPILILQGTNNEISDVSGAYYFMQHANC---NREIKIYEGAKH 249 (276)
T ss_pred cCCCCEEEEecCCCCcCChHHHHHHHHHccC---CceEEEeCCCcc
Confidence 3479999999999999999999888776533 578888999999
No 11
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=97.78 E-value=0.001 Score=57.19 Aligned_cols=46 Identities=22% Similarity=0.143 Sum_probs=39.0
Q ss_pred CCCeEEEecCCCCcCChhHHHHHHHHHHHcCCcEEEEEcCCCCCCC
Q 045563 210 ACPHLYLYSTGDKVIPYQSVELLIEEQRKTGRKVFSVILGHLPTWI 255 (271)
Q Consensus 210 ~~p~LyiYS~~D~li~~~~Ve~~~~~~r~~G~~V~~~~f~~S~H~~ 255 (271)
..|.+.++++.|++||.+..++..+..++.|.+|+.+.|++..|.|
T Consensus 155 ~~pi~~~hG~~D~vvp~~~~~~~~~~L~~~~~~v~~~~~~g~gH~i 200 (216)
T PF02230_consen 155 KTPILIIHGDEDPVVPFEWAEKTAEFLKAAGANVEFHEYPGGGHEI 200 (216)
T ss_dssp TS-EEEEEETT-SSSTHHHHHHHHHHHHCTT-GEEEEEETT-SSS-
T ss_pred CCcEEEEecCCCCcccHHHHHHHHHHHHhcCCCEEEEEcCCCCCCC
Confidence 5789999999999999999999999999999999999999999943
No 12
>PF01738 DLH: Dienelactone hydrolase family; InterPro: IPR002925 Dienelactone hydrolases play a crucial role in chlorocatechol degradation via the modified ortho cleavage pathway. Enzymes induced in 4-fluorobenzoate-utilizing bacteria have been classified into three groups on the basis of their specificity towards cis- and trans-dienelactone []. Some proteins contain repeated small fragments of this domain (for example rat kan-1 protein).; GO: 0016787 hydrolase activity; PDB: 1GGV_A 1ZIY_A 1ZI6_A 1ZIC_A 1ZJ5_A 1ZI8_A 1ZJ4_A 1ZI9_A 1ZIX_A 3F67_A.
Probab=97.73 E-value=0.002 Score=55.12 Aligned_cols=44 Identities=25% Similarity=0.312 Sum_probs=37.2
Q ss_pred CCCeEEEecCCCCcCChhHHHHHHHHHHHcCCcEEEEEcCCCCC
Q 045563 210 ACPHLYLYSTGDKVIPYQSVELLIEEQRKTGRKVFSVILGHLPT 253 (271)
Q Consensus 210 ~~p~LyiYS~~D~li~~~~Ve~~~~~~r~~G~~V~~~~f~~S~H 253 (271)
.+|.+.+++++|+.++.+.++++.+..+++|.+++.+.|+|..|
T Consensus 145 ~~P~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~y~ga~H 188 (218)
T PF01738_consen 145 KAPVLILFGENDPFFPPEEVEALEEALKAAGVDVEVHVYPGAGH 188 (218)
T ss_dssp -S-EEEEEETT-TTS-HHHHHHHHHHHHCTTTTEEEEEETT--T
T ss_pred CCCEeecCccCCCCCChHHHHHHHHHHHhcCCcEEEEECCCCcc
Confidence 58999999999999999999999999999999999999999999
No 13
>PLN02511 hydrolase
Probab=97.64 E-value=0.0024 Score=60.02 Aligned_cols=48 Identities=10% Similarity=0.075 Sum_probs=35.9
Q ss_pred CCCCeEEEecCCCCcCChhHHHHHHHHHHHcCCcEEEEEcCCCCCCCCcCCcccccccc
Q 045563 209 PACPHLYLYSTGDKVIPYQSVELLIEEQRKTGRKVFSVILGHLPTWITSGLSPADTYRS 267 (271)
Q Consensus 209 ~~~p~LyiYS~~D~li~~~~Ve~~~~~~r~~G~~V~~~~f~~S~H~~~~~~~~v~H~r~ 267 (271)
..+|.|+|++++|+++|.+.+.... + +..-.+..+..++++| ++++..
T Consensus 297 I~vPtLiI~g~dDpi~p~~~~~~~~--~-~~~p~~~l~~~~~gGH--------~~~~E~ 344 (388)
T PLN02511 297 VRVPLLCIQAANDPIAPARGIPRED--I-KANPNCLLIVTPSGGH--------LGWVAG 344 (388)
T ss_pred CCCCeEEEEcCCCCcCCcccCcHhH--H-hcCCCEEEEECCCcce--------eccccC
Confidence 4789999999999999987653211 1 2233578888999999 888743
No 14
>TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily. This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase
Probab=97.58 E-value=0.013 Score=50.69 Aligned_cols=106 Identities=17% Similarity=0.055 Sum_probs=63.0
Q ss_pred CccEEEEEccCCCchHHHHHHHHHHhhCCcceEEEeeccccee-ecccchhhhhhHHHHHHHHHHhhcccccCCCCceEE
Q 045563 2 TAVTVVLLGWLGARRKHLRRYVEWYNSRGINAITFVVEAKELL-SFDLGRGVEKRIADLSNEIVSWVSHEEQDGKQRCLI 80 (271)
Q Consensus 2 ~~~lVvl~gW~ga~~khl~KY~~~Y~~~g~~~l~~~~~~~~~~-~~~~g~~~~~~~~~~~~~i~~~l~~~~~~~~~~~il 80 (271)
++|+|++.||.|+...+..-+.+.-++.|++++.+..+..-.- .+.. ....-.++.+++.+.+++++.. ..++.
T Consensus 25 ~~~vl~~hG~~g~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~-~~~~~~~~~~~~~~~~~~~~~~----~~~~~ 99 (288)
T TIGR01250 25 KIKLLLLHGGPGMSHEYLENLRELLKEEGREVIMYDQLGCGYSDQPDD-SDELWTIDYFVDELEEVREKLG----LDKFY 99 (288)
T ss_pred CCeEEEEcCCCCccHHHHHHHHHHHHhcCCEEEEEcCCCCCCCCCCCc-ccccccHHHHHHHHHHHHHHcC----CCcEE
Confidence 4689999999988866666666666666899988876653111 1100 0000124556666665554331 33588
Q ss_pred EEecccchHHHHHHHHHHhcCCCCccCCeeEEEEeCCCC
Q 045563 81 FHTFSNTGWFVCGSILASLQGREDLMQKIKGLIVDSGGA 119 (271)
Q Consensus 81 ~H~FSnGG~~~~~~l~~~l~~~~~~~~~i~g~I~DS~Pg 119 (271)
+=.+|.||...+. ++.. + ..+++++|+-++..
T Consensus 100 liG~S~Gg~ia~~-~a~~---~---p~~v~~lvl~~~~~ 131 (288)
T TIGR01250 100 LLGHSWGGMLAQE-YALK---Y---GQHLKGLIISSMLD 131 (288)
T ss_pred EEEeehHHHHHHH-HHHh---C---ccccceeeEecccc
Confidence 8899999965442 2222 1 24677888877654
No 15
>TIGR01738 bioH putative pimeloyl-BioC--CoA transferase BioH. This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam model pfam00561). Members of this family are restricted to the Proteobacteria.
Probab=97.57 E-value=0.0041 Score=52.33 Aligned_cols=42 Identities=21% Similarity=0.211 Sum_probs=33.3
Q ss_pred CCCCCeEEEecCCCCcCChhHHHHHHHHHHHcCCcEEEEEcCCCCC
Q 045563 208 PPACPHLYLYSTGDKVIPYQSVELLIEEQRKTGRKVFSVILGHLPT 253 (271)
Q Consensus 208 ~~~~p~LyiYS~~D~li~~~~Ve~~~~~~r~~G~~V~~~~f~~S~H 253 (271)
...+|.|+++++.|.++|.+..++..+.. -+++.+.+++++|
T Consensus 186 ~i~~Pvlii~g~~D~~~~~~~~~~~~~~~----~~~~~~~~~~~gH 227 (245)
T TIGR01738 186 NISVPFLRLYGYLDGLVPAKVVPYLDKLA----PHSELYIFAKAAH 227 (245)
T ss_pred cCCCCEEEEeecCCcccCHHHHHHHHHhC----CCCeEEEeCCCCC
Confidence 34789999999999999988877664432 2466778999999
No 16
>PRK10749 lysophospholipase L2; Provisional
Probab=97.54 E-value=0.017 Score=52.74 Aligned_cols=46 Identities=13% Similarity=0.175 Sum_probs=39.9
Q ss_pred CCCCCeEEEecCCCCcCChhHHHHHHHHHHHcCC---cEEEEEcCCCCC
Q 045563 208 PPACPHLYLYSTGDKVIPYQSVELLIEEQRKTGR---KVFSVILGHLPT 253 (271)
Q Consensus 208 ~~~~p~LyiYS~~D~li~~~~Ve~~~~~~r~~G~---~V~~~~f~~S~H 253 (271)
....|.|+|.++.|.+++.+..+++++..++.|. +++.+.|+++.|
T Consensus 257 ~i~~P~Lii~G~~D~vv~~~~~~~~~~~l~~~~~~~~~~~l~~~~gagH 305 (330)
T PRK10749 257 DITTPLLLLQAEEERVVDNRMHDRFCEARTAAGHPCEGGKPLVIKGAYH 305 (330)
T ss_pred CCCCCEEEEEeCCCeeeCHHHHHHHHHHHhhcCCCCCCceEEEeCCCcc
Confidence 3578999999999999999999999888877653 457889999999
No 17
>PRK14875 acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional
Probab=97.52 E-value=0.0061 Score=55.96 Aligned_cols=104 Identities=12% Similarity=0.059 Sum_probs=59.9
Q ss_pred CccEEEEEccCCCchHHHHHHHHHHhhCCcceEEEeecccceeecccchhhhhhHHHHHHHHHHhhcccccCCCCceEEE
Q 045563 2 TAVTVVLLGWLGARRKHLRRYVEWYNSRGINAITFVVEAKELLSFDLGRGVEKRIADLSNEIVSWVSHEEQDGKQRCLIF 81 (271)
Q Consensus 2 ~~~lVvl~gW~ga~~khl~KY~~~Y~~~g~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~l~~~~~~~~~~~il~ 81 (271)
.++++++.||.+..... ....+... .+++++.+..+..-...... ....+..+++.+.+++.+. ...++++
T Consensus 131 ~~~vl~~HG~~~~~~~~-~~~~~~l~-~~~~v~~~d~~g~G~s~~~~---~~~~~~~~~~~~~~~~~~~----~~~~~~l 201 (371)
T PRK14875 131 GTPVVLIHGFGGDLNNW-LFNHAALA-AGRPVIALDLPGHGASSKAV---GAGSLDELAAAVLAFLDAL----GIERAHL 201 (371)
T ss_pred CCeEEEECCCCCccchH-HHHHHHHh-cCCEEEEEcCCCCCCCCCCC---CCCCHHHHHHHHHHHHHhc----CCccEEE
Confidence 36788899998876543 22233232 34777777765532111110 1123456666666666443 2457899
Q ss_pred EecccchHHHHHHHHHHhcCCCCccCCeeEEEEeCCCCCC
Q 045563 82 HTFSNTGWFVCGSILASLQGREDLMQKIKGLIVDSGGAGA 121 (271)
Q Consensus 82 H~FSnGG~~~~~~l~~~l~~~~~~~~~i~g~I~DS~Pg~~ 121 (271)
..+|.||...+. +... + ..++.++|+.+.++..
T Consensus 202 vG~S~Gg~~a~~-~a~~---~---~~~v~~lv~~~~~~~~ 234 (371)
T PRK14875 202 VGHSMGGAVALR-LAAR---A---PQRVASLTLIAPAGLG 234 (371)
T ss_pred EeechHHHHHHH-HHHh---C---chheeEEEEECcCCcC
Confidence 999999975542 2211 1 2467889998876543
No 18
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=97.47 E-value=0.0015 Score=65.08 Aligned_cols=180 Identities=12% Similarity=0.066 Sum_probs=104.5
Q ss_pred HHHHHHHHhhCCcceEEEeecccceeeccc-----chhhhhhHHHHHHHHHHhhcccccCCCCceEEEEecccchHHHHH
Q 045563 19 LRRYVEWYNSRGINAITFVVEAKELLSFDL-----GRGVEKRIADLSNEIVSWVSHEEQDGKQRCLIFHTFSNTGWFVCG 93 (271)
Q Consensus 19 l~KY~~~Y~~~g~~~l~~~~~~~~~~~~~~-----g~~~~~~~~~~~~~i~~~l~~~~~~~~~~~il~H~FSnGG~~~~~ 93 (271)
..-+.+.+...|+.++....+.....-..+ +.......+++...+. ++.+.. -.++.+|.+-..|-||.+++.
T Consensus 412 ~~~~~q~~~~~G~~V~~~n~RGS~GyG~~F~~~~~~~~g~~~~~D~~~~~~-~l~~~~-~~d~~ri~i~G~SyGGymtl~ 489 (620)
T COG1506 412 FNPEIQVLASAGYAVLAPNYRGSTGYGREFADAIRGDWGGVDLEDLIAAVD-ALVKLP-LVDPERIGITGGSYGGYMTLL 489 (620)
T ss_pred cchhhHHHhcCCeEEEEeCCCCCCccHHHHHHhhhhccCCccHHHHHHHHH-HHHhCC-CcChHHeEEeccChHHHHHHH
Confidence 356778899999999988877654421111 1111223445544444 554433 235779999999999976542
Q ss_pred HHHHHhcCCCCccCCeeEEEEeCCCCCCCCh-hhhhhhhhhhhhcccccccccccccCcccccccccccccccCCchHHH
Q 045563 94 SILASLQGREDLMQKIKGLIVDSGGAGAFDP-KVWAGGFGAAILKKRSSSAYSTVEDGKINGLEGQVSVSMMQDKEPDII 172 (271)
Q Consensus 94 ~l~~~l~~~~~~~~~i~g~I~DS~Pg~~~~~-~~~~~g~~~a~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 172 (271)
.+ ... +..++.|-..++...... .....++.. ...
T Consensus 490 ~~----~~~----~~f~a~~~~~~~~~~~~~~~~~~~~~~~--~~~---------------------------------- 525 (620)
T COG1506 490 AA----TKT----PRFKAAVAVAGGVDWLLYFGESTEGLRF--DPE---------------------------------- 525 (620)
T ss_pred HH----hcC----chhheEEeccCcchhhhhccccchhhcC--CHH----------------------------------
Confidence 22 111 244566666554443210 000000000 000
Q ss_pred HHHHHHHHHHHHHHHhcchh-hHHHHHHHHHHhhcCCCCCCeEEEecCCCCcCChhHHHHHHHHHHHcCCcEEEEEcCCC
Q 045563 173 ETMLLSLLEKLFSYIINLPD-VNQRIKKVVSAVTNNPPACPHLYLYSTGDKVIPYQSVELLIEEQRKTGRKVFSVILGHL 251 (271)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~p~LyiYS~~D~li~~~~Ve~~~~~~r~~G~~V~~~~f~~S 251 (271)
.... .+. .++.+.+.......+..++|-|+|.|++|.-||.++-+.+++..+++|.+|+.+.|++.
T Consensus 526 ------------~~~~-~~~~~~~~~~~~sp~~~~~~i~~P~LliHG~~D~~v~~~q~~~~~~aL~~~g~~~~~~~~p~e 592 (620)
T COG1506 526 ------------ENGG-GPPEDREKYEDRSPIFYADNIKTPLLLIHGEEDDRVPIEQAEQLVDALKRKGKPVELVVFPDE 592 (620)
T ss_pred ------------HhCC-CcccChHHHHhcChhhhhcccCCCEEEEeecCCccCChHHHHHHHHHHHHcCceEEEEEeCCC
Confidence 0000 000 01112222222333445899999999999999999999999999999999999999999
Q ss_pred CCCCCc
Q 045563 252 PTWITS 257 (271)
Q Consensus 252 ~H~~~~ 257 (271)
.||+..
T Consensus 593 ~H~~~~ 598 (620)
T COG1506 593 GHGFSR 598 (620)
T ss_pred CcCCCC
Confidence 995543
No 19
>TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase. Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate.
Probab=97.39 E-value=0.011 Score=49.70 Aligned_cols=41 Identities=15% Similarity=0.042 Sum_probs=33.0
Q ss_pred CCCCeEEEecCCCCcCChhHHHHHHHHHHHcCCcEEEEEcCCCCC
Q 045563 209 PACPHLYLYSTGDKVIPYQSVELLIEEQRKTGRKVFSVILGHLPT 253 (271)
Q Consensus 209 ~~~p~LyiYS~~D~li~~~~Ve~~~~~~r~~G~~V~~~~f~~S~H 253 (271)
..+|.|+++++.|.++|.+.++++.+... ..+.+.++++.|
T Consensus 192 ~~~Pvlii~g~~D~~~~~~~~~~~~~~~~----~~~~~~~~~~gH 232 (251)
T TIGR02427 192 IAVPTLCIAGDQDGSTPPELVREIADLVP----GARFAEIRGAGH 232 (251)
T ss_pred cCCCeEEEEeccCCcCChHHHHHHHHhCC----CceEEEECCCCC
Confidence 36899999999999999988877655432 346677899999
No 20
>COG1647 Esterase/lipase [General function prediction only]
Probab=97.38 E-value=0.016 Score=50.20 Aligned_cols=204 Identities=13% Similarity=0.161 Sum_probs=109.4
Q ss_pred CccEEEEEccCCCc--hHHHHHHHHHHhhCCcceEEEeeccc-----ceeecccchhhhhhHHHHHHHHHHhhcccccCC
Q 045563 2 TAVTVVLLGWLGAR--RKHLRRYVEWYNSRGINAITFVVEAK-----ELLSFDLGRGVEKRIADLSNEIVSWVSHEEQDG 74 (271)
Q Consensus 2 ~~~lVvl~gW~ga~--~khl~KY~~~Y~~~g~~~l~~~~~~~-----~~~~~~~g~~~~~~~~~~~~~i~~~l~~~~~~~ 74 (271)
++.+.+|.|.+|.. -|+|.+|.+ +.||++-.-.-|.. +++- .+.+ ...+.+.+.... |.+.
T Consensus 15 ~~AVLllHGFTGt~~Dvr~Lgr~L~---e~GyTv~aP~ypGHG~~~e~fl~--t~~~--DW~~~v~d~Y~~-L~~~---- 82 (243)
T COG1647 15 NRAVLLLHGFTGTPRDVRMLGRYLN---ENGYTVYAPRYPGHGTLPEDFLK--TTPR--DWWEDVEDGYRD-LKEA---- 82 (243)
T ss_pred CEEEEEEeccCCCcHHHHHHHHHHH---HCCceEecCCCCCCCCCHHHHhc--CCHH--HHHHHHHHHHHH-HHHc----
Confidence 35688999999854 467777764 67998866544432 2222 1221 122333333322 2221
Q ss_pred CCceEEEEecccchHHHHHHHHHHhcCCCCccCCeeEEEEeCCCCCCCChhhhhhhhhhhhhcccccccccccccCcccc
Q 045563 75 KQRCLIFHTFSNTGWFVCGSILASLQGREDLMQKIKGLIVDSGGAGAFDPKVWAGGFGAAILKKRSSSAYSTVEDGKING 154 (271)
Q Consensus 75 ~~~~il~H~FSnGG~~~~~~l~~~l~~~~~~~~~i~g~I~DS~Pg~~~~~~~~~~g~~~a~l~~~~~~~~~~~~~~~l~~ 154 (271)
....|.+=.+|+||.+++ .|.. ..|++++|.=|+|-....-...-.++-.. +.+.
T Consensus 83 gy~eI~v~GlSmGGv~al-kla~--------~~p~K~iv~m~a~~~~k~~~~iie~~l~y-~~~~--------------- 137 (243)
T COG1647 83 GYDEIAVVGLSMGGVFAL-KLAY--------HYPPKKIVPMCAPVNVKSWRIIIEGLLEY-FRNA--------------- 137 (243)
T ss_pred CCCeEEEEeecchhHHHH-HHHh--------hCCccceeeecCCcccccchhhhHHHHHH-HHHh---------------
Confidence 377999999999997553 2211 24788999999988754211111222110 0000
Q ss_pred cccccccccccCCchHHHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHhhcCCCCCCeEEEecCCCCcCChhHHHHHHH
Q 045563 155 LEGQVSVSMMQDKEPDIIETMLLSLLEKLFSYIINLPDVNQRIKKVVSAVTNNPPACPHLYLYSTGDKVIPYQSVELLIE 234 (271)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~LyiYS~~D~li~~~~Ve~~~~ 234 (271)
+..+.+.+..+..-+.+.......... ..+.-+++..+.+.. ...|.+.+-++.|.+||.+..+-..+
T Consensus 138 -------kk~e~k~~e~~~~e~~~~~~~~~~~~~---~~~~~i~~~~~~~~~--I~~pt~vvq~~~D~mv~~~sA~~Iy~ 205 (243)
T COG1647 138 -------KKYEGKDQEQIDKEMKSYKDTPMTTTA---QLKKLIKDARRSLDK--IYSPTLVVQGRQDEMVPAESANFIYD 205 (243)
T ss_pred -------hhccCCCHHHHHHHHHHhhcchHHHHH---HHHHHHHHHHhhhhh--cccchhheecccCCCCCHHHHHHHHH
Confidence 000112222222221111000000000 001112222333332 36799999999999999999999888
Q ss_pred HHHHcCCcEEEEEcCCCCCCCC
Q 045563 235 EQRKTGRKVFSVILGHLPTWIT 256 (271)
Q Consensus 235 ~~r~~G~~V~~~~f~~S~H~~~ 256 (271)
+.... +-+...|++|.|.||
T Consensus 206 ~v~s~--~KeL~~~e~SgHVIt 225 (243)
T COG1647 206 HVESD--DKELKWLEGSGHVIT 225 (243)
T ss_pred hccCC--cceeEEEccCCceee
Confidence 87663 556788999999444
No 21
>PLN02652 hydrolase; alpha/beta fold family protein
Probab=97.36 E-value=0.0076 Score=56.89 Aligned_cols=43 Identities=19% Similarity=0.152 Sum_probs=36.0
Q ss_pred CCCCeEEEecCCCCcCChhHHHHHHHHHHHcCCcEEEEEcCCCCC
Q 045563 209 PACPHLYLYSTGDKVIPYQSVELLIEEQRKTGRKVFSVILGHLPT 253 (271)
Q Consensus 209 ~~~p~LyiYS~~D~li~~~~Ve~~~~~~r~~G~~V~~~~f~~S~H 253 (271)
..+|.|.++|++|.++|.+..++.++.... .+++.+.|+++.|
T Consensus 323 I~vPvLIi~G~~D~vvp~~~a~~l~~~~~~--~~k~l~~~~ga~H 365 (395)
T PLN02652 323 VTVPFMVLHGTADRVTDPLASQDLYNEAAS--RHKDIKLYDGFLH 365 (395)
T ss_pred CCCCEEEEEeCCCCCCCHHHHHHHHHhcCC--CCceEEEECCCeE
Confidence 479999999999999999999888876543 3466677999999
No 22
>PRK10985 putative hydrolase; Provisional
Probab=97.30 E-value=0.047 Score=49.76 Aligned_cols=107 Identities=12% Similarity=0.058 Sum_probs=59.4
Q ss_pred ccEEEEEccCCCc-hHHHHHHHHHHhhCCcceEEEeeccccee---ecccchhhhhhHHHHHHHHHHhhcccccCCCCce
Q 045563 3 AVTVVLLGWLGAR-RKHLRRYVEWYNSRGINAITFVVEAKELL---SFDLGRGVEKRIADLSNEIVSWVSHEEQDGKQRC 78 (271)
Q Consensus 3 ~~lVvl~gW~ga~-~khl~KY~~~Y~~~g~~~l~~~~~~~~~~---~~~~g~~~~~~~~~~~~~i~~~l~~~~~~~~~~~ 78 (271)
+.+|++-||.|.. ..++.+.++...+.|++++++..+...-- .+.... .....++.. +++++.+.. ...+
T Consensus 59 p~vll~HG~~g~~~~~~~~~~~~~l~~~G~~v~~~d~rG~g~~~~~~~~~~~--~~~~~D~~~-~i~~l~~~~---~~~~ 132 (324)
T PRK10985 59 PRLVLFHGLEGSFNSPYAHGLLEAAQKRGWLGVVMHFRGCSGEPNRLHRIYH--SGETEDARF-FLRWLQREF---GHVP 132 (324)
T ss_pred CEEEEeCCCCCCCcCHHHHHHHHHHHHCCCEEEEEeCCCCCCCccCCcceEC--CCchHHHHH-HHHHHHHhC---CCCC
Confidence 4577777998764 34666778888999999998876542110 011000 011233322 222332221 2457
Q ss_pred EEEEecccchHHHHHHHHHHhcCCCCccCCeeEEEEeCCCCC
Q 045563 79 LIFHTFSNTGWFVCGSILASLQGREDLMQKIKGLIVDSGGAG 120 (271)
Q Consensus 79 il~H~FSnGG~~~~~~l~~~l~~~~~~~~~i~g~I~DS~Pg~ 120 (271)
+++-.+|.||......+.+ +.+ ..++++.|+=|+|-.
T Consensus 133 ~~~vG~S~GG~i~~~~~~~----~~~-~~~~~~~v~i~~p~~ 169 (324)
T PRK10985 133 TAAVGYSLGGNMLACLLAK----EGD-DLPLDAAVIVSAPLM 169 (324)
T ss_pred EEEEEecchHHHHHHHHHh----hCC-CCCccEEEEEcCCCC
Confidence 9999999999654433322 111 124667676677754
No 23
>COG0412 Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=97.23 E-value=0.033 Score=48.81 Aligned_cols=45 Identities=24% Similarity=0.189 Sum_probs=43.0
Q ss_pred CCCCeEEEecCCCCcCChhHHHHHHHHHHHcCCcEEEEEcCCCCC
Q 045563 209 PACPHLYLYSTGDKVIPYQSVELLIEEQRKTGRKVFSVILGHLPT 253 (271)
Q Consensus 209 ~~~p~LyiYS~~D~li~~~~Ve~~~~~~r~~G~~V~~~~f~~S~H 253 (271)
.++|.|.+|++.|..+|.++++.+.++.+++|.+++.+.|.+..|
T Consensus 157 ~~~pvl~~~~~~D~~~p~~~~~~~~~~~~~~~~~~~~~~y~ga~H 201 (236)
T COG0412 157 IKVPVLLHLAGEDPYIPAADVDALAAALEDAGVKVDLEIYPGAGH 201 (236)
T ss_pred ccCcEEEEecccCCCCChhHHHHHHHHHHhcCCCeeEEEeCCCcc
Confidence 378999999999999999999999999999999999999999889
No 24
>PLN02298 hydrolase, alpha/beta fold family protein
Probab=97.19 E-value=0.039 Score=50.16 Aligned_cols=43 Identities=19% Similarity=0.162 Sum_probs=36.0
Q ss_pred CCCCeEEEecCCCCcCChhHHHHHHHHHHHcCCcEEEEEcCCCCC
Q 045563 209 PACPHLYLYSTGDKVIPYQSVELLIEEQRKTGRKVFSVILGHLPT 253 (271)
Q Consensus 209 ~~~p~LyiYS~~D~li~~~~Ve~~~~~~r~~G~~V~~~~f~~S~H 253 (271)
..+|.|+|.++.|.++|.+..+++++..+.. +.+.+.|+++.|
T Consensus 250 i~~PvLii~G~~D~ivp~~~~~~l~~~i~~~--~~~l~~~~~a~H 292 (330)
T PLN02298 250 VSIPFIVLHGSADVVTDPDVSRALYEEAKSE--DKTIKIYDGMMH 292 (330)
T ss_pred cCCCEEEEecCCCCCCCHHHHHHHHHHhccC--CceEEEcCCcEe
Confidence 3699999999999999999999987766543 356678999999
No 25
>COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=97.10 E-value=0.015 Score=53.07 Aligned_cols=230 Identities=14% Similarity=0.148 Sum_probs=110.7
Q ss_pred ccEEEEEccCCCchH-HHHHHHHHHhhCCcceEEEeecc---cceeecccchhhhhhHHHHHHHHHHhhcccccCCCCce
Q 045563 3 AVTVVLLGWLGARRK-HLRRYVEWYNSRGINAITFVVEA---KELLSFDLGRGVEKRIADLSNEIVSWVSHEEQDGKQRC 78 (271)
Q Consensus 3 ~~lVvl~gW~ga~~k-hl~KY~~~Y~~~g~~~l~~~~~~---~~~~~~~~g~~~~~~~~~~~~~i~~~l~~~~~~~~~~~ 78 (271)
|-+|++.|-.|+... ++.--....+++|+.++++-.+. .-...|+..... ...+++.. ++.++.. ..+++
T Consensus 76 P~vVl~HGL~G~s~s~y~r~L~~~~~~rg~~~Vv~~~Rgcs~~~n~~p~~yh~G--~t~D~~~~-l~~l~~~---~~~r~ 149 (345)
T COG0429 76 PLVVLFHGLEGSSNSPYARGLMRALSRRGWLVVVFHFRGCSGEANTSPRLYHSG--ETEDIRFF-LDWLKAR---FPPRP 149 (345)
T ss_pred ceEEEEeccCCCCcCHHHHHHHHHHHhcCCeEEEEecccccCCcccCcceeccc--chhHHHHH-HHHHHHh---CCCCc
Confidence 457778888875544 45555566788999999986443 111122221110 01233222 2223221 35889
Q ss_pred EEEEecccchHHHHHHHHHHhcCCCCccCCeeEEEEeCCCCCCCC-hhhhhhhhhhhhhcccccccccccccCccccccc
Q 045563 79 LIFHTFSNTGWFVCGSILASLQGREDLMQKIKGLIVDSGGAGAFD-PKVWAGGFGAAILKKRSSSAYSTVEDGKINGLEG 157 (271)
Q Consensus 79 il~H~FSnGG~~~~~~l~~~l~~~~~~~~~i~g~I~DS~Pg~~~~-~~~~~~g~~~a~l~~~~~~~~~~~~~~~l~~~~~ 157 (271)
+.+=.||-||......+.+. ..+. ++.+-+.=|.|-.... -..+..|++..++.+. .... | ..
T Consensus 150 ~~avG~SLGgnmLa~ylgee---g~d~--~~~aa~~vs~P~Dl~~~~~~l~~~~s~~ly~r~-l~~~-------L---~~ 213 (345)
T COG0429 150 LYAVGFSLGGNMLANYLGEE---GDDL--PLDAAVAVSAPFDLEACAYRLDSGFSLRLYSRY-LLRN-------L---KR 213 (345)
T ss_pred eEEEEecccHHHHHHHHHhh---ccCc--ccceeeeeeCHHHHHHHHHHhcCchhhhhhHHH-HHHH-------H---HH
Confidence 99999999995443333221 3333 3345555555544310 0012223321111000 0000 0 00
Q ss_pred cccccc--ccCCchHHHHHHHHHHHHHHHHH-------HhcchhhHHHHHHHHHHhhcCCCCCCeEEEecCCCCcCChhH
Q 045563 158 QVSVSM--MQDKEPDIIETMLLSLLEKLFSY-------IINLPDVNQRIKKVVSAVTNNPPACPHLYLYSTGDKVIPYQS 228 (271)
Q Consensus 158 ~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~p~LyiYS~~D~li~~~~ 228 (271)
+...+. +.+..|-.+...+. -+.++..+ ...++++..+++.....-.-.....|.|.||+++|++++.++
T Consensus 214 ~~~~kl~~l~~~~p~~~~~~ik-~~~ti~eFD~~~Tap~~Gf~da~dYYr~aSs~~~L~~Ir~PtLii~A~DDP~~~~~~ 292 (345)
T COG0429 214 NAARKLKELEPSLPGTVLAAIK-RCRTIREFDDLLTAPLHGFADAEDYYRQASSLPLLPKIRKPTLIINAKDDPFMPPEV 292 (345)
T ss_pred HHHHHHHhcCcccCcHHHHHHH-hhchHHhccceeeecccCCCcHHHHHHhccccccccccccceEEEecCCCCCCChhh
Confidence 000000 00001111000000 00111111 112345444443322221123457899999999999999999
Q ss_pred HHHHHHHHHHcCCcEEEEEcCCCCCCCCcCCccccccc
Q 045563 229 VELLIEEQRKTGRKVFSVILGHLPTWITSGLSPADTYR 266 (271)
Q Consensus 229 Ve~~~~~~r~~G~~V~~~~f~~S~H~~~~~~~~v~H~r 266 (271)
|.+..++ ..-.|..+..+..+| |+=+-
T Consensus 293 iP~~~~~---~np~v~l~~t~~GGH--------vGfl~ 319 (345)
T COG0429 293 IPKLQEM---LNPNVLLQLTEHGGH--------VGFLG 319 (345)
T ss_pred CCcchhc---CCCceEEEeecCCce--------EEecc
Confidence 9887665 445799999999999 87554
No 26
>TIGR02821 fghA_ester_D S-formylglutathione hydrolase. This model describes a protein family from bacteria, yeast, and human, with a conserved critical role in formaldehyde detoxification as S-formylglutathione hydrolase (EC 3.1.2.12). Members in eukaryotes such as the human protein are better known as esterase D (EC 3.1.1.1), an enzyme with broad specificity, although S-formylglutathione hydrolase has now been demonstrated as well.
Probab=97.02 E-value=0.067 Score=47.61 Aligned_cols=44 Identities=11% Similarity=0.022 Sum_probs=39.4
Q ss_pred CCCeEEEecCCCCcCCh-hHHHHHHHHHHHcCCcEEEEEcCCCCC
Q 045563 210 ACPHLYLYSTGDKVIPY-QSVELLIEEQRKTGRKVFSVILGHLPT 253 (271)
Q Consensus 210 ~~p~LyiYS~~D~li~~-~~Ve~~~~~~r~~G~~V~~~~f~~S~H 253 (271)
..|.++.+++.|.++|. ++.+.+.+.+++.|.+|+...+++..|
T Consensus 211 ~~plli~~G~~D~~v~~~~~~~~~~~~l~~~g~~v~~~~~~g~~H 255 (275)
T TIGR02821 211 HSTILIDQGTADQFLDEQLRPDAFEQACRAAGQALTLRRQAGYDH 255 (275)
T ss_pred CCCeeEeecCCCcccCccccHHHHHHHHHHcCCCeEEEEeCCCCc
Confidence 34666679999999999 688999999999999999999999999
No 27
>TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily.
Probab=96.99 E-value=0.18 Score=44.80 Aligned_cols=107 Identities=10% Similarity=0.046 Sum_probs=58.7
Q ss_pred CccEEEEEccCCC---chHHHHHHHHHHhhCCcceEEEeecccceeecccchhhhhhHHHHHHHHHHhhcccccCCCCce
Q 045563 2 TAVTVVLLGWLGA---RRKHLRRYVEWYNSRGINAITFVVEAKELLSFDLGRGVEKRIADLSNEIVSWVSHEEQDGKQRC 78 (271)
Q Consensus 2 ~~~lVvl~gW~ga---~~khl~KY~~~Y~~~g~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~l~~~~~~~~~~~ 78 (271)
++++|++.|+.+. ..+...+.++...+.|++++.+..+..---..... ......+++... ++.+.+.. ...++
T Consensus 26 ~~~vv~i~gg~~~~~g~~~~~~~la~~l~~~G~~v~~~Dl~G~G~S~~~~~-~~~~~~~d~~~~-~~~l~~~~--~g~~~ 101 (274)
T TIGR03100 26 TTGVLIVVGGPQYRVGSHRQFVLLARRLAEAGFPVLRFDYRGMGDSEGENL-GFEGIDADIAAA-IDAFREAA--PHLRR 101 (274)
T ss_pred CCeEEEEeCCccccCCchhHHHHHHHHHHHCCCEEEEeCCCCCCCCCCCCC-CHHHHHHHHHHH-HHHHHhhC--CCCCc
Confidence 4578899998752 23444566777888999999887654311001100 011111222222 22232221 02356
Q ss_pred EEEEecccchHHHHHHHHHHhcCCCCccCCeeEEEEeCCCCC
Q 045563 79 LIFHTFSNTGWFVCGSILASLQGREDLMQKIKGLIVDSGGAG 120 (271)
Q Consensus 79 il~H~FSnGG~~~~~~l~~~l~~~~~~~~~i~g~I~DS~Pg~ 120 (271)
|++-..|.||...+.. +.. ..+++|+|+-|.+-.
T Consensus 102 i~l~G~S~Gg~~a~~~---a~~-----~~~v~~lil~~p~~~ 135 (274)
T TIGR03100 102 IVAWGLCDAASAALLY---APA-----DLRVAGLVLLNPWVR 135 (274)
T ss_pred EEEEEECHHHHHHHHH---hhh-----CCCccEEEEECCccC
Confidence 9999999999654322 111 147899999987643
No 28
>COG0400 Predicted esterase [General function prediction only]
Probab=96.96 E-value=0.022 Score=49.02 Aligned_cols=43 Identities=26% Similarity=0.166 Sum_probs=40.7
Q ss_pred CCCeEEEecCCCCcCChhHHHHHHHHHHHcCCcEEEEEcCCCCC
Q 045563 210 ACPHLYLYSTGDKVIPYQSVELLIEEQRKTGRKVFSVILGHLPT 253 (271)
Q Consensus 210 ~~p~LyiYS~~D~li~~~~Ve~~~~~~r~~G~~V~~~~f~~S~H 253 (271)
..|.+.++++.|++||...-++..+..++.|.+|+.+.++ ..|
T Consensus 146 ~~pill~hG~~Dpvvp~~~~~~l~~~l~~~g~~v~~~~~~-~GH 188 (207)
T COG0400 146 GTPILLSHGTEDPVVPLALAEALAEYLTASGADVEVRWHE-GGH 188 (207)
T ss_pred CCeEEEeccCcCCccCHHHHHHHHHHHHHcCCCEEEEEec-CCC
Confidence 5789999999999999999999999999999999999998 888
No 29
>PLN02442 S-formylglutathione hydrolase
Probab=96.87 E-value=0.078 Score=47.54 Aligned_cols=45 Identities=18% Similarity=0.059 Sum_probs=40.2
Q ss_pred CCCCeEEEecCCCCcCChh-HHHHHHHHHHHcCCcEEEEEcCCCCC
Q 045563 209 PACPHLYLYSTGDKVIPYQ-SVELLIEEQRKTGRKVFSVILGHLPT 253 (271)
Q Consensus 209 ~~~p~LyiYS~~D~li~~~-~Ve~~~~~~r~~G~~V~~~~f~~S~H 253 (271)
...|.+.+.++.|.+++.. ..+++.+.+++.|.+++...+++..|
T Consensus 216 ~~~pvli~~G~~D~~v~~~~~s~~~~~~l~~~g~~~~~~~~pg~~H 261 (283)
T PLN02442 216 VSATILIDQGEADKFLKEQLLPENFEEACKEAGAPVTLRLQPGYDH 261 (283)
T ss_pred cCCCEEEEECCCCccccccccHHHHHHHHHHcCCCeEEEEeCCCCc
Confidence 3678999999999999974 57889999999999999999999999
No 30
>TIGR03611 RutD pyrimidine utilization protein D. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067.
Probab=96.78 E-value=0.098 Score=44.38 Aligned_cols=41 Identities=17% Similarity=0.137 Sum_probs=33.0
Q ss_pred CCCCeEEEecCCCCcCChhHHHHHHHHHHHcCCcEEEEEcCCCCC
Q 045563 209 PACPHLYLYSTGDKVIPYQSVELLIEEQRKTGRKVFSVILGHLPT 253 (271)
Q Consensus 209 ~~~p~LyiYS~~D~li~~~~Ve~~~~~~r~~G~~V~~~~f~~S~H 253 (271)
..+|.|+++++.|.++|.+..++..+... +++.+.++++.|
T Consensus 197 i~~P~l~i~g~~D~~~~~~~~~~~~~~~~----~~~~~~~~~~gH 237 (257)
T TIGR03611 197 IQHPVLLIANRDDMLVPYTQSLRLAAALP----NAQLKLLPYGGH 237 (257)
T ss_pred cCccEEEEecCcCcccCHHHHHHHHHhcC----CceEEEECCCCC
Confidence 47899999999999999998887655432 356677899999
No 31
>COG2267 PldB Lysophospholipase [Lipid metabolism]
Probab=96.76 E-value=0.057 Score=49.00 Aligned_cols=44 Identities=23% Similarity=0.152 Sum_probs=35.9
Q ss_pred CCCCCeEEEecCCCCcCChhHHHHHHHHHHHcCCc-EEEEEcCCCCC
Q 045563 208 PPACPHLYLYSTGDKVIPYQSVELLIEEQRKTGRK-VFSVILGHLPT 253 (271)
Q Consensus 208 ~~~~p~LyiYS~~D~li~~~~Ve~~~~~~r~~G~~-V~~~~f~~S~H 253 (271)
....|.|.+++++|.++++ ++...+-.++.|.+ ++.+.++|.-|
T Consensus 226 ~~~~PvLll~g~~D~vv~~--~~~~~~~~~~~~~~~~~~~~~~g~~H 270 (298)
T COG2267 226 AIALPVLLLQGGDDRVVDN--VEGLARFFERAGSPDKELKVIPGAYH 270 (298)
T ss_pred cccCCEEEEecCCCccccC--cHHHHHHHHhcCCCCceEEecCCcch
Confidence 4478999999999999997 56666666666654 89999999999
No 32
>PLN02385 hydrolase; alpha/beta fold family protein
Probab=96.70 E-value=0.2 Score=46.01 Aligned_cols=45 Identities=20% Similarity=0.129 Sum_probs=36.5
Q ss_pred CCCCeEEEecCCCCcCChhHHHHHHHHHHHcCCcEEEEEcCCCCCCC
Q 045563 209 PACPHLYLYSTGDKVIPYQSVELLIEEQRKTGRKVFSVILGHLPTWI 255 (271)
Q Consensus 209 ~~~p~LyiYS~~D~li~~~~Ve~~~~~~r~~G~~V~~~~f~~S~H~~ 255 (271)
..+|.|+|+++.|.++|.+..+++.+..... +++.+.++++.|++
T Consensus 278 i~~P~Lii~G~~D~vv~~~~~~~l~~~~~~~--~~~l~~i~~~gH~l 322 (349)
T PLN02385 278 VSLPLLILHGEADKVTDPSVSKFLYEKASSS--DKKLKLYEDAYHSI 322 (349)
T ss_pred CCCCEEEEEeCCCCccChHHHHHHHHHcCCC--CceEEEeCCCeeec
Confidence 4799999999999999999988887655432 45677899999943
No 33
>PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate []. This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C.
Probab=96.70 E-value=0.012 Score=55.45 Aligned_cols=110 Identities=15% Similarity=0.202 Sum_probs=59.5
Q ss_pred CCccEEEEEccCCCch-HHHHHHHHHHhhCCcceEEEeecccceeecccchhhhhhHHHHHHHHHHhhcccccCCCCceE
Q 045563 1 ETAVTVVLLGWLGARR-KHLRRYVEWYNSRGINAITFVVEAKELLSFDLGRGVEKRIADLSNEIVSWVSHEEQDGKQRCL 79 (271)
Q Consensus 1 ~~~~lVvl~gW~ga~~-khl~KY~~~Y~~~g~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~l~~~~~~~~~~~i 79 (271)
+|.|+||++|=+++-. .+..-|.+.+..+|+.++++-.|..-. .+..... .....+-..+++++.+.+. -+..+|
T Consensus 188 ~p~P~VIv~gGlDs~qeD~~~l~~~~l~~rGiA~LtvDmPG~G~-s~~~~l~--~D~~~l~~aVLd~L~~~p~-VD~~RV 263 (411)
T PF06500_consen 188 KPYPTVIVCGGLDSLQEDLYRLFRDYLAPRGIAMLTVDMPGQGE-SPKWPLT--QDSSRLHQAVLDYLASRPW-VDHTRV 263 (411)
T ss_dssp S-EEEEEEE--TTS-GGGGHHHHHCCCHHCT-EEEEE--TTSGG-GTTT-S---S-CCHHHHHHHHHHHHSTT-EEEEEE
T ss_pred CCCCEEEEeCCcchhHHHHHHHHHHHHHhCCCEEEEEccCCCcc-cccCCCC--cCHHHHHHHHHHHHhcCCc-cChhhe
Confidence 4679999999776544 555666777789999999999887522 1111100 0111233455566544321 246799
Q ss_pred EEEecccchHHHHHHHHHHhcCCCCccCCeeEEEEeCCCCCC
Q 045563 80 IFHTFSNTGWFVCGSILASLQGREDLMQKIKGLIVDSGGAGA 121 (271)
Q Consensus 80 l~H~FSnGG~~~~~~l~~~l~~~~~~~~~i~g~I~DS~Pg~~ 121 (271)
.+=.||.||.+.. .+... . ..+|+|+|.-.+|...
T Consensus 264 ~~~G~SfGGy~Av-RlA~l-e-----~~RlkavV~~Ga~vh~ 298 (411)
T PF06500_consen 264 GAWGFSFGGYYAV-RLAAL-E-----DPRLKAVVALGAPVHH 298 (411)
T ss_dssp EEEEETHHHHHHH-HHHHH-T-----TTT-SEEEEES---SC
T ss_pred EEEEeccchHHHH-HHHHh-c-----ccceeeEeeeCchHhh
Confidence 9999999996443 22211 1 2588999998777543
No 34
>TIGR03343 biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase. Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself.
Probab=96.67 E-value=0.18 Score=44.09 Aligned_cols=41 Identities=10% Similarity=0.095 Sum_probs=33.3
Q ss_pred CCCCeEEEecCCCCcCChhHHHHHHHHHHHcCCcEEEEEcCCCCC
Q 045563 209 PACPHLYLYSTGDKVIPYQSVELLIEEQRKTGRKVFSVILGHLPT 253 (271)
Q Consensus 209 ~~~p~LyiYS~~D~li~~~~Ve~~~~~~r~~G~~V~~~~f~~S~H 253 (271)
..+|.|+++++.|.+++.+..++.++... +++.+.++++.|
T Consensus 222 i~~Pvlli~G~~D~~v~~~~~~~~~~~~~----~~~~~~i~~agH 262 (282)
T TIGR03343 222 IKAKTLVTWGRDDRFVPLDHGLKLLWNMP----DAQLHVFSRCGH 262 (282)
T ss_pred CCCCEEEEEccCCCcCCchhHHHHHHhCC----CCEEEEeCCCCc
Confidence 46899999999999999988877665442 466677899999
No 35
>PRK03592 haloalkane dehalogenase; Provisional
Probab=96.58 E-value=0.11 Score=46.16 Aligned_cols=102 Identities=11% Similarity=0.025 Sum_probs=57.5
Q ss_pred CccEEEEEccCCCchHHHHHHHHHHhhCCcceEEEeecccceeecccchhhhhhHHHHHHHHHHhhcccccCCCCceEEE
Q 045563 2 TAVTVVLLGWLGARRKHLRRYVEWYNSRGINAITFVVEAKELLSFDLGRGVEKRIADLSNEIVSWVSHEEQDGKQRCLIF 81 (271)
Q Consensus 2 ~~~lVvl~gW~ga~~khl~KY~~~Y~~~g~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~l~~~~~~~~~~~il~ 81 (271)
.+|||++.||.++. ..-....+...+.| .++.+..+.. -.+..... .-..+..++.+.++++... ..++.+
T Consensus 27 g~~vvllHG~~~~~-~~w~~~~~~L~~~~-~via~D~~G~-G~S~~~~~--~~~~~~~a~dl~~ll~~l~----~~~~~l 97 (295)
T PRK03592 27 GDPIVFLHGNPTSS-YLWRNIIPHLAGLG-RCLAPDLIGM-GASDKPDI--DYTFADHARYLDAWFDALG----LDDVVL 97 (295)
T ss_pred CCEEEEECCCCCCH-HHHHHHHHHHhhCC-EEEEEcCCCC-CCCCCCCC--CCCHHHHHHHHHHHHHHhC----CCCeEE
Confidence 46899999998665 34455556666666 5555544432 11111100 1134555566666554432 357888
Q ss_pred EecccchHHHHHHHHHHhcCCCCccCCeeEEEEeCCCC
Q 045563 82 HTFSNTGWFVCGSILASLQGREDLMQKIKGLIVDSGGA 119 (271)
Q Consensus 82 H~FSnGG~~~~~~l~~~l~~~~~~~~~i~g~I~DS~Pg 119 (271)
=..|.||...+ .+... + ..+++++|+=+++.
T Consensus 98 vGhS~Gg~ia~-~~a~~---~---p~~v~~lil~~~~~ 128 (295)
T PRK03592 98 VGHDWGSALGF-DWAAR---H---PDRVRGIAFMEAIV 128 (295)
T ss_pred EEECHHHHHHH-HHHHh---C---hhheeEEEEECCCC
Confidence 89999996543 22211 2 25688888776643
No 36
>TIGR01607 PST-A Plasmodium subtelomeric family (PST-A). These genes are preferentially located in the subtelomeric regions of the chromosomes of both P. falciparum and P. yoelii.
Probab=96.50 E-value=0.31 Score=44.71 Aligned_cols=44 Identities=20% Similarity=0.282 Sum_probs=35.7
Q ss_pred CCCCCeEEEecCCCCcCChhHHHHHHHHHHHcCCcEEEEEcCCCCC
Q 045563 208 PPACPHLYLYSTGDKVIPYQSVELLIEEQRKTGRKVFSVILGHLPT 253 (271)
Q Consensus 208 ~~~~p~LyiYS~~D~li~~~~Ve~~~~~~r~~G~~V~~~~f~~S~H 253 (271)
+...|.|+|.++.|.+++.+..+++.+.+... +++.+.|+++.|
T Consensus 268 ~~~~P~Lii~G~~D~vv~~~~~~~~~~~~~~~--~~~l~~~~g~~H 311 (332)
T TIGR01607 268 PKDIPILFIHSKGDCVCSYEGTVSFYNKLSIS--NKELHTLEDMDH 311 (332)
T ss_pred CCCCCEEEEEeCCCCccCHHHHHHHHHhccCC--CcEEEEECCCCC
Confidence 34689999999999999999988877655433 466678999999
No 37
>PLN02824 hydrolase, alpha/beta fold family protein
Probab=96.43 E-value=0.41 Score=42.49 Aligned_cols=103 Identities=11% Similarity=0.022 Sum_probs=59.0
Q ss_pred CccEEEEEccCCCchHHHHHHHHHHhhCCcceEEEeecccceeeccc-ch----hhhhhHHHHHHHHHHhhcccccCCCC
Q 045563 2 TAVTVVLLGWLGARRKHLRRYVEWYNSRGINAITFVVEAKELLSFDL-GR----GVEKRIADLSNEIVSWVSHEEQDGKQ 76 (271)
Q Consensus 2 ~~~lVvl~gW~ga~~khl~KY~~~Y~~~g~~~l~~~~~~~~~~~~~~-g~----~~~~~~~~~~~~i~~~l~~~~~~~~~ 76 (271)
.++||++.||.+... .-.+......+.| .++.+-.+.. -.+... .. ...-.++..++.+.+++.+.. .
T Consensus 29 ~~~vlllHG~~~~~~-~w~~~~~~L~~~~-~vi~~DlpG~-G~S~~~~~~~~~~~~~~~~~~~a~~l~~~l~~l~----~ 101 (294)
T PLN02824 29 GPALVLVHGFGGNAD-HWRKNTPVLAKSH-RVYAIDLLGY-GYSDKPNPRSAPPNSFYTFETWGEQLNDFCSDVV----G 101 (294)
T ss_pred CCeEEEECCCCCChh-HHHHHHHHHHhCC-eEEEEcCCCC-CCCCCCccccccccccCCHHHHHHHHHHHHHHhc----C
Confidence 368999999987664 4566666666664 5555544432 111110 00 001235667777777775542 4
Q ss_pred ceEEEEecccchHHHHHHHHHHhcCCCCccCCeeEEEEeCCC
Q 045563 77 RCLIFHTFSNTGWFVCGSILASLQGREDLMQKIKGLIVDSGG 118 (271)
Q Consensus 77 ~~il~H~FSnGG~~~~~~l~~~l~~~~~~~~~i~g~I~DS~P 118 (271)
.++.+-..|+||...+ .+... + ..+++++|+=+++
T Consensus 102 ~~~~lvGhS~Gg~va~-~~a~~---~---p~~v~~lili~~~ 136 (294)
T PLN02824 102 DPAFVICNSVGGVVGL-QAAVD---A---PELVRGVMLINIS 136 (294)
T ss_pred CCeEEEEeCHHHHHHH-HHHHh---C---hhheeEEEEECCC
Confidence 6788899999996543 22111 2 2467787776544
No 38
>TIGR01838 PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, class I. This model represents the class I subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs with three to five carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=96.42 E-value=0.96 Score=44.47 Aligned_cols=41 Identities=20% Similarity=0.213 Sum_probs=33.1
Q ss_pred CCCCeEEEecCCCCcCChhHHHHHHHHHHHcCCcEEEEEcCCCCC
Q 045563 209 PACPHLYLYSTGDKVIPYQSVELLIEEQRKTGRKVFSVILGHLPT 253 (271)
Q Consensus 209 ~~~p~LyiYS~~D~li~~~~Ve~~~~~~r~~G~~V~~~~f~~S~H 253 (271)
..+|.|+|.++.|.++|++.++...+. .+ ......+++|+|
T Consensus 414 I~vPvLvV~G~~D~IvP~~sa~~l~~~---i~-~~~~~vL~~sGH 454 (532)
T TIGR01838 414 VKVPVYIIATREDHIAPWQSAYRGAAL---LG-GPKTFVLGESGH 454 (532)
T ss_pred CCCCEEEEeeCCCCcCCHHHHHHHHHH---CC-CCEEEEECCCCC
Confidence 379999999999999999999876543 33 345568999999
No 39
>PLN02679 hydrolase, alpha/beta fold family protein
Probab=96.36 E-value=0.85 Score=42.22 Aligned_cols=45 Identities=18% Similarity=0.173 Sum_probs=34.3
Q ss_pred CCCCeEEEecCCCCcCChhH-HHHHHHHHHHcCCcEEEEEcCCCCC
Q 045563 209 PACPHLYLYSTGDKVIPYQS-VELLIEEQRKTGRKVFSVILGHLPT 253 (271)
Q Consensus 209 ~~~p~LyiYS~~D~li~~~~-Ve~~~~~~r~~G~~V~~~~f~~S~H 253 (271)
..+|.|+|+++.|.++|.+. +.+++++..+.=-+++.+.++++.|
T Consensus 291 i~~PtLii~G~~D~~~p~~~~~~~~~~~l~~~ip~~~l~~i~~aGH 336 (360)
T PLN02679 291 ISLPILVLWGDQDPFTPLDGPVGKYFSSLPSQLPNVTLYVLEGVGH 336 (360)
T ss_pred cCCCEEEEEeCCCCCcCchhhHHHHHHhhhccCCceEEEEcCCCCC
Confidence 46899999999999999874 4445555544323578888999999
No 40
>PRK10162 acetyl esterase; Provisional
Probab=96.32 E-value=0.67 Score=42.24 Aligned_cols=41 Identities=10% Similarity=-0.014 Sum_probs=37.9
Q ss_pred CCeEEEecCCCCcCChhHHHHHHHHHHHcCCcEEEEEcCCCCC
Q 045563 211 CPHLYLYSTGDKVIPYQSVELLIEEQRKTGRKVFSVILGHLPT 253 (271)
Q Consensus 211 ~p~LyiYS~~D~li~~~~Ve~~~~~~r~~G~~V~~~~f~~S~H 253 (271)
.|.+.++++.|.+. ++.+++++..++.|.+|+...|++..|
T Consensus 249 Pp~~i~~g~~D~L~--de~~~~~~~L~~aGv~v~~~~~~g~~H 289 (318)
T PRK10162 249 PPCFIAGAEFDPLL--DDSRLLYQTLAAHQQPCEFKLYPGTLH 289 (318)
T ss_pred CCeEEEecCCCcCc--ChHHHHHHHHHHcCCCEEEEEECCCce
Confidence 47888999999997 589999999999999999999999999
No 41
>TIGR01836 PHA_synth_III_C poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit. This model represents the PhaC subunit of a heterodimeric form of polyhydroxyalkanoic acid (PHA) synthase. Excepting the PhaC of Bacillus megaterium (which needs PhaR), all members require PhaE (TIGR01834) for activity and are designated class III. This enzyme builds ester polymers for carbon and energy storage that accumulate in inclusions, and both this enzyme and the depolymerase associate with the inclusions. Class III enzymes polymerize short-chain-length hydroxyalkanoates.
Probab=96.32 E-value=0.26 Score=45.32 Aligned_cols=42 Identities=14% Similarity=0.175 Sum_probs=33.0
Q ss_pred CCCCeEEEecCCCCcCChhHHHHHHHHHHHcCCcEEEEEcCCCCC
Q 045563 209 PACPHLYLYSTGDKVIPYQSVELLIEEQRKTGRKVFSVILGHLPT 253 (271)
Q Consensus 209 ~~~p~LyiYS~~D~li~~~~Ve~~~~~~r~~G~~V~~~~f~~S~H 253 (271)
..+|.|+++++.|.++|++.++.+.+.... -+++.+.++ +.|
T Consensus 285 i~~Pvliv~G~~D~i~~~~~~~~~~~~~~~--~~~~~~~~~-~gH 326 (350)
T TIGR01836 285 IKMPILNIYAERDHLVPPDASKALNDLVSS--EDYTELSFP-GGH 326 (350)
T ss_pred CCCCeEEEecCCCCcCCHHHHHHHHHHcCC--CCeEEEEcC-CCC
Confidence 378999999999999999999888775432 345556666 788
No 42
>PRK03204 haloalkane dehalogenase; Provisional
Probab=96.29 E-value=0.65 Score=41.36 Aligned_cols=102 Identities=12% Similarity=0.039 Sum_probs=53.4
Q ss_pred ccEEEEEccCCCchHHHHHHHHHHhhCCcceEEEeecccceeecccchhhhhhHHHHHHHHHHhhcccccCCCCceEEEE
Q 045563 3 AVTVVLLGWLGARRKHLRRYVEWYNSRGINAITFVVEAKELLSFDLGRGVEKRIADLSNEIVSWVSHEEQDGKQRCLIFH 82 (271)
Q Consensus 3 ~~lVvl~gW~ga~~khl~KY~~~Y~~~g~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~l~~~~~~~~~~~il~H 82 (271)
+++|++.||.... ..-.+...... .+++++.+..+..-. +.... .....++..++.+.++++.. ...++++-
T Consensus 35 ~~iv~lHG~~~~~-~~~~~~~~~l~-~~~~vi~~D~~G~G~-S~~~~-~~~~~~~~~~~~~~~~~~~~----~~~~~~lv 106 (286)
T PRK03204 35 PPILLCHGNPTWS-FLYRDIIVALR-DRFRCVAPDYLGFGL-SERPS-GFGYQIDEHARVIGEFVDHL----GLDRYLSM 106 (286)
T ss_pred CEEEEECCCCccH-HHHHHHHHHHh-CCcEEEEECCCCCCC-CCCCC-ccccCHHHHHHHHHHHHHHh----CCCCEEEE
Confidence 6899999997433 22233333343 457777776554211 11100 00112345555555554332 13468888
Q ss_pred ecccchHHHHHHHHHHhcCCCCccCCeeEEEEeCCCC
Q 045563 83 TFSNTGWFVCGSILASLQGREDLMQKIKGLIVDSGGA 119 (271)
Q Consensus 83 ~FSnGG~~~~~~l~~~l~~~~~~~~~i~g~I~DS~Pg 119 (271)
..|.||...+ .++.. + ..+++++|+-+++.
T Consensus 107 G~S~Gg~va~-~~a~~---~---p~~v~~lvl~~~~~ 136 (286)
T PRK03204 107 GQDWGGPISM-AVAVE---R---ADRVRGVVLGNTWF 136 (286)
T ss_pred EECccHHHHH-HHHHh---C---hhheeEEEEECccc
Confidence 9999996433 22211 1 24688888866554
No 43
>PLN02211 methyl indole-3-acetate methyltransferase
Probab=96.29 E-value=0.29 Score=43.50 Aligned_cols=102 Identities=11% Similarity=0.094 Sum_probs=60.7
Q ss_pred ccEEEEEccCCCchHHHHHHHHHHhhCCcceEEEeecccceeecccchhhhhhHHHHHHHHHHhhcccccCCCCceEEEE
Q 045563 3 AVTVVLLGWLGARRKHLRRYVEWYNSRGINAITFVVEAKELLSFDLGRGVEKRIADLSNEIVSWVSHEEQDGKQRCLIFH 82 (271)
Q Consensus 3 ~~lVvl~gW~ga~~khl~KY~~~Y~~~g~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~l~~~~~~~~~~~il~H 82 (271)
+++|++-||.+... .-.+.+..-.+.|++++.+..+.... ..... .....++..++.+.+++.+.. ...++++=
T Consensus 19 p~vvliHG~~~~~~-~w~~~~~~L~~~g~~vi~~dl~g~G~-s~~~~-~~~~~~~~~~~~l~~~i~~l~---~~~~v~lv 92 (273)
T PLN02211 19 PHFVLIHGISGGSW-CWYKIRCLMENSGYKVTCIDLKSAGI-DQSDA-DSVTTFDEYNKPLIDFLSSLP---ENEKVILV 92 (273)
T ss_pred CeEEEECCCCCCcC-cHHHHHHHHHhCCCEEEEecccCCCC-CCCCc-ccCCCHHHHHHHHHHHHHhcC---CCCCEEEE
Confidence 57999999887654 33666666667799998887665321 11100 001234556666666665431 14689999
Q ss_pred ecccchHHHHHHHHHHhcCCCCccCCeeEEEEeCC
Q 045563 83 TFSNTGWFVCGSILASLQGREDLMQKIKGLIVDSG 117 (271)
Q Consensus 83 ~FSnGG~~~~~~l~~~l~~~~~~~~~i~g~I~DS~ 117 (271)
..|.||.... .++.. + ...++++|+=++
T Consensus 93 GhS~GG~v~~-~~a~~---~---p~~v~~lv~~~~ 120 (273)
T PLN02211 93 GHSAGGLSVT-QAIHR---F---PKKICLAVYVAA 120 (273)
T ss_pred EECchHHHHH-HHHHh---C---hhheeEEEEecc
Confidence 9999996433 22221 1 245777777543
No 44
>KOG1838 consensus Alpha/beta hydrolase [General function prediction only]
Probab=96.27 E-value=0.32 Score=45.93 Aligned_cols=106 Identities=20% Similarity=0.197 Sum_probs=63.8
Q ss_pred ccEEEEEccC-CCchHHHHHHHHHHhhCCcceEEEeecc---cceeecccc-hhhhhhHHHHHHHHHHhhcccccCCCCc
Q 045563 3 AVTVVLLGWL-GARRKHLRRYVEWYNSRGINAITFVVEA---KELLSFDLG-RGVEKRIADLSNEIVSWVSHEEQDGKQR 77 (271)
Q Consensus 3 ~~lVvl~gW~-ga~~khl~KY~~~Y~~~g~~~l~~~~~~---~~~~~~~~g-~~~~~~~~~~~~~i~~~l~~~~~~~~~~ 77 (271)
+-+|++-|=. |+++.+|.-.+..=++.|+.++++..+. ..+..++.. ..-...+..+++.|.+- -+..
T Consensus 126 P~vvilpGltg~S~~~YVr~lv~~a~~~G~r~VVfN~RG~~g~~LtTpr~f~ag~t~Dl~~~v~~i~~~-------~P~a 198 (409)
T KOG1838|consen 126 PIVVILPGLTGGSHESYVRHLVHEAQRKGYRVVVFNHRGLGGSKLTTPRLFTAGWTEDLREVVNHIKKR-------YPQA 198 (409)
T ss_pred cEEEEecCCCCCChhHHHHHHHHHHHhCCcEEEEECCCCCCCCccCCCceeecCCHHHHHHHHHHHHHh-------CCCC
Confidence 3445555666 5788888888888999999999987554 233333321 11133455555555432 2366
Q ss_pred eEEEEecccchHHHHHHHHHHhcCCCCccCCeeEEEEeCCCC
Q 045563 78 CLIFHTFSNTGWFVCGSILASLQGREDLMQKIKGLIVDSGGA 119 (271)
Q Consensus 78 ~il~H~FSnGG~~~~~~l~~~l~~~~~~~~~i~g~I~DS~Pg 119 (271)
+++.=.||.||......| .+.++-.+=+.|+.+.|+=.
T Consensus 199 ~l~avG~S~Gg~iL~nYL----GE~g~~~~l~~a~~v~~Pwd 236 (409)
T KOG1838|consen 199 PLFAVGFSMGGNILTNYL----GEEGDNTPLIAAVAVCNPWD 236 (409)
T ss_pred ceEEEEecchHHHHHHHh----hhccCCCCceeEEEEeccch
Confidence 999999999996543333 33222223455677766544
No 45
>TIGR03695 menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase. This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase.
Probab=96.21 E-value=0.48 Score=39.40 Aligned_cols=102 Identities=15% Similarity=0.237 Sum_probs=53.2
Q ss_pred ccEEEEEccCCCchHHHHHHHHHHhhCCcceEEEeecccceeecccchhhhhhHHHHHHH-HHHhhcccccCCCCceEEE
Q 045563 3 AVTVVLLGWLGARRKHLRRYVEWYNSRGINAITFVVEAKELLSFDLGRGVEKRIADLSNE-IVSWVSHEEQDGKQRCLIF 81 (271)
Q Consensus 3 ~~lVvl~gW~ga~~khl~KY~~~Y~~~g~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~-i~~~l~~~~~~~~~~~il~ 81 (271)
+++|++-||++..... ..-.+... .|++++.+..+..-. ............+.+++. +..+++.. ...++++
T Consensus 2 ~~vv~~hG~~~~~~~~-~~~~~~L~-~~~~v~~~d~~g~G~-s~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~l 74 (251)
T TIGR03695 2 PVLVFLHGFLGSGADW-QALIELLG-PHFRCLAIDLPGHGS-SQSPDEIERYDFEEAAQDILATLLDQL----GIEPFFL 74 (251)
T ss_pred CEEEEEcCCCCchhhH-HHHHHHhc-ccCeEEEEcCCCCCC-CCCCCccChhhHHHHHHHHHHHHHHHc----CCCeEEE
Confidence 6788888998776543 33333333 588887776553211 111000011233455555 33333221 2457888
Q ss_pred EecccchHHHHHHHHHHhcCCCCccCCeeEEEEeCCC
Q 045563 82 HTFSNTGWFVCGSILASLQGREDLMQKIKGLIVDSGG 118 (271)
Q Consensus 82 H~FSnGG~~~~~~l~~~l~~~~~~~~~i~g~I~DS~P 118 (271)
=..|.||...+ .+... ++ ..++++|+-+++
T Consensus 75 ~G~S~Gg~ia~-~~a~~---~~---~~v~~lil~~~~ 104 (251)
T TIGR03695 75 VGYSMGGRIAL-YYALQ---YP---ERVQGLILESGS 104 (251)
T ss_pred EEeccHHHHHH-HHHHh---Cc---hheeeeEEecCC
Confidence 89999996443 22222 22 357777776543
No 46
>PRK10673 acyl-CoA esterase; Provisional
Probab=96.18 E-value=0.68 Score=39.70 Aligned_cols=41 Identities=7% Similarity=0.075 Sum_probs=31.8
Q ss_pred CCCCeEEEecCCCCcCChhHHHHHHHHHHHcCCcEEEEEcCCCCC
Q 045563 209 PACPHLYLYSTGDKVIPYQSVELLIEEQRKTGRKVFSVILGHLPT 253 (271)
Q Consensus 209 ~~~p~LyiYS~~D~li~~~~Ve~~~~~~r~~G~~V~~~~f~~S~H 253 (271)
..+|.|+|.++.|.+++.+..+..++.. -+++.+.++++.|
T Consensus 194 ~~~P~l~i~G~~D~~~~~~~~~~~~~~~----~~~~~~~~~~~gH 234 (255)
T PRK10673 194 WPHPALFIRGGNSPYVTEAYRDDLLAQF----PQARAHVIAGAGH 234 (255)
T ss_pred CCCCeEEEECCCCCCCCHHHHHHHHHhC----CCcEEEEeCCCCC
Confidence 4689999999999999976666654432 3566777999999
No 47
>PLN02894 hydrolase, alpha/beta fold family protein
Probab=96.10 E-value=0.89 Score=42.91 Aligned_cols=106 Identities=12% Similarity=0.089 Sum_probs=55.3
Q ss_pred ccEEEEEccCCCchHHHHHHHHHHhhCCcceEEEeeccccee-ecccc-hhhhhhHHHHHHHHHHhhcccccCCCCceEE
Q 045563 3 AVTVVLLGWLGARRKHLRRYVEWYNSRGINAITFVVEAKELL-SFDLG-RGVEKRIADLSNEIVSWVSHEEQDGKQRCLI 80 (271)
Q Consensus 3 ~~lVvl~gW~ga~~khl~KY~~~Y~~~g~~~l~~~~~~~~~~-~~~~g-~~~~~~~~~~~~~i~~~l~~~~~~~~~~~il 80 (271)
++||++-||.+..... .+..+... .++.++.+..+..-.. .+... .......+.+++.+.+++.+. ...+++
T Consensus 106 p~vvllHG~~~~~~~~-~~~~~~L~-~~~~vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~i~~~~~~l----~~~~~~ 179 (402)
T PLN02894 106 PTLVMVHGYGASQGFF-FRNFDALA-SRFRVIAIDQLGWGGSSRPDFTCKSTEETEAWFIDSFEEWRKAK----NLSNFI 179 (402)
T ss_pred CEEEEECCCCcchhHH-HHHHHHHH-hCCEEEEECCCCCCCCCCCCcccccHHHHHHHHHHHHHHHHHHc----CCCCeE
Confidence 6899999998755433 22233333 3577766654432110 01100 001112223444555555332 234788
Q ss_pred EEecccchHHHHHHHHHHhcCCCCccCCeeEEEEeCCCCCC
Q 045563 81 FHTFSNTGWFVCGSILASLQGREDLMQKIKGLIVDSGGAGA 121 (271)
Q Consensus 81 ~H~FSnGG~~~~~~l~~~l~~~~~~~~~i~g~I~DS~Pg~~ 121 (271)
+-..|.||...+... .. + ..+++++|+-+.++..
T Consensus 180 lvGhS~GG~la~~~a-~~---~---p~~v~~lvl~~p~~~~ 213 (402)
T PLN02894 180 LLGHSFGGYVAAKYA-LK---H---PEHVQHLILVGPAGFS 213 (402)
T ss_pred EEEECHHHHHHHHHH-Hh---C---chhhcEEEEECCcccc
Confidence 999999996544222 11 1 2467888888766654
No 48
>PRK00870 haloalkane dehalogenase; Provisional
Probab=96.10 E-value=0.38 Score=42.96 Aligned_cols=101 Identities=12% Similarity=0.041 Sum_probs=56.6
Q ss_pred ccEEEEEccCCCchHHHHHHHHHHhhCCcceEEEeecccceeecccchhhhhhHHHHHHHHHHhhcccccCCCCceEEEE
Q 045563 3 AVTVVLLGWLGARRKHLRRYVEWYNSRGINAITFVVEAKELLSFDLGRGVEKRIADLSNEIVSWVSHEEQDGKQRCLIFH 82 (271)
Q Consensus 3 ~~lVvl~gW~ga~~khl~KY~~~Y~~~g~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~l~~~~~~~~~~~il~H 82 (271)
++||++.||.+.... -.+......+.|++++.+..+..-.-..... ...-.++..++.+.+++.+.. ..++.+=
T Consensus 47 ~~lvliHG~~~~~~~-w~~~~~~L~~~gy~vi~~Dl~G~G~S~~~~~-~~~~~~~~~a~~l~~~l~~l~----~~~v~lv 120 (302)
T PRK00870 47 PPVLLLHGEPSWSYL-YRKMIPILAAAGHRVIAPDLIGFGRSDKPTR-REDYTYARHVEWMRSWFEQLD----LTDVTLV 120 (302)
T ss_pred CEEEEECCCCCchhh-HHHHHHHHHhCCCEEEEECCCCCCCCCCCCC-cccCCHHHHHHHHHHHHHHcC----CCCEEEE
Confidence 579999999755433 3455555556789998887664311110000 001124556666666665431 3467777
Q ss_pred ecccchHHHHHHHHHHhcCCCCccCCeeEEEEeC
Q 045563 83 TFSNTGWFVCGSILASLQGREDLMQKIKGLIVDS 116 (271)
Q Consensus 83 ~FSnGG~~~~~~l~~~l~~~~~~~~~i~g~I~DS 116 (271)
..|.||...+ .+... + ..+++++|+-+
T Consensus 121 GhS~Gg~ia~-~~a~~---~---p~~v~~lvl~~ 147 (302)
T PRK00870 121 CQDWGGLIGL-RLAAE---H---PDRFARLVVAN 147 (302)
T ss_pred EEChHHHHHH-HHHHh---C---hhheeEEEEeC
Confidence 8999996443 33222 2 24577777654
No 49
>PRK11071 esterase YqiA; Provisional
Probab=96.10 E-value=0.21 Score=42.07 Aligned_cols=38 Identities=16% Similarity=0.074 Sum_probs=30.5
Q ss_pred CCCCeEEEecCCCCcCChhHHHHHHHHHHHcCCcEEEEEcCCCCC
Q 045563 209 PACPHLYLYSTGDKVIPYQSVELLIEEQRKTGRKVFSVILGHLPT 253 (271)
Q Consensus 209 ~~~p~LyiYS~~D~li~~~~Ve~~~~~~r~~G~~V~~~~f~~S~H 253 (271)
.+.|.+.+-+++|++||++.-+++.+.+ .....+|+.|
T Consensus 135 ~~~~v~iihg~~De~V~~~~a~~~~~~~-------~~~~~~ggdH 172 (190)
T PRK11071 135 SPDLIWLLQQTGDEVLDYRQAVAYYAAC-------RQTVEEGGNH 172 (190)
T ss_pred ChhhEEEEEeCCCCcCCHHHHHHHHHhc-------ceEEECCCCc
Confidence 3566788999999999999999988843 2335699999
No 50
>PRK10349 carboxylesterase BioH; Provisional
Probab=96.00 E-value=0.91 Score=39.24 Aligned_cols=98 Identities=18% Similarity=0.175 Sum_probs=54.6
Q ss_pred CccEEEEEccCCCchHHHHHHHHHHhhCCcceEEEeecccceeecccchhhhhhHHHHHHHHHHhhcccccCCCCceEEE
Q 045563 2 TAVTVVLLGWLGARRKHLRRYVEWYNSRGINAITFVVEAKELLSFDLGRGVEKRIADLSNEIVSWVSHEEQDGKQRCLIF 81 (271)
Q Consensus 2 ~~~lVvl~gW~ga~~khl~KY~~~Y~~~g~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~l~~~~~~~~~~~il~ 81 (271)
++|||+|.||.+... .-.+..+...+ .+.++.+..+..-. +.... ...++.+++.+.+.. ..++.+
T Consensus 13 ~~~ivllHG~~~~~~-~w~~~~~~L~~-~~~vi~~Dl~G~G~-S~~~~---~~~~~~~~~~l~~~~--------~~~~~l 78 (256)
T PRK10349 13 NVHLVLLHGWGLNAE-VWRCIDEELSS-HFTLHLVDLPGFGR-SRGFG---ALSLADMAEAVLQQA--------PDKAIW 78 (256)
T ss_pred CCeEEEECCCCCChh-HHHHHHHHHhc-CCEEEEecCCCCCC-CCCCC---CCCHHHHHHHHHhcC--------CCCeEE
Confidence 356999999986665 44566666654 47777776554311 11110 113345555554321 345677
Q ss_pred EecccchHHHHHHHHHHhcCCCCccCCeeEEE-EeCCCCC
Q 045563 82 HTFSNTGWFVCGSILASLQGREDLMQKIKGLI-VDSGGAG 120 (271)
Q Consensus 82 H~FSnGG~~~~~~l~~~l~~~~~~~~~i~g~I-~DS~Pg~ 120 (271)
=..|.||...+ .++.. + ...++++| +|+.|..
T Consensus 79 vGhS~Gg~ia~-~~a~~---~---p~~v~~lili~~~~~~ 111 (256)
T PRK10349 79 LGWSLGGLVAS-QIALT---H---PERVQALVTVASSPCF 111 (256)
T ss_pred EEECHHHHHHH-HHHHh---C---hHhhheEEEecCccce
Confidence 89999997554 33221 2 23566666 5776654
No 51
>TIGR01249 pro_imino_pep_1 proline iminopeptidase, Neisseria-type subfamily. This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members.
Probab=95.95 E-value=0.61 Score=41.92 Aligned_cols=40 Identities=15% Similarity=0.028 Sum_probs=32.3
Q ss_pred CCCeEEEecCCCCcCChhHHHHHHHHHHHcCCcEEEEEcCCCCC
Q 045563 210 ACPHLYLYSTGDKVIPYQSVELLIEEQRKTGRKVFSVILGHLPT 253 (271)
Q Consensus 210 ~~p~LyiYS~~D~li~~~~Ve~~~~~~r~~G~~V~~~~f~~S~H 253 (271)
.+|.|.|.++.|.++|.+..+++.+... +.+.+.++++.|
T Consensus 248 ~~P~lii~g~~D~~~p~~~~~~~~~~~~----~~~~~~~~~~gH 287 (306)
T TIGR01249 248 NIPTYIVHGRYDLCCPLQSAWALHKAFP----EAELKVTNNAGH 287 (306)
T ss_pred CCCeEEEecCCCCCCCHHHHHHHHHhCC----CCEEEEECCCCC
Confidence 4899999999999999998887776543 345666888888
No 52
>PF07859 Abhydrolase_3: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR013094 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents the catalytic domain fold-3 of alpha/beta hydrolase. ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3D7R_B 2C7B_B 3ZWQ_B 2YH2_B 3BXP_A 3D3N_A 1LZK_A 1LZL_A 2O7V_A 2O7R_A ....
Probab=95.84 E-value=0.39 Score=40.32 Aligned_cols=40 Identities=20% Similarity=0.306 Sum_probs=34.6
Q ss_pred CeEEEecCCCCcCChhHHHHHHHHHHHcCCcEEEEEcCCCCC
Q 045563 212 PHLYLYSTGDKVIPYQSVELLIEEQRKTGRKVFSVILGHLPT 253 (271)
Q Consensus 212 p~LyiYS~~D~li~~~~Ve~~~~~~r~~G~~V~~~~f~~S~H 253 (271)
|.+.++++.|.++ ++.+++++.+|+.|.+|+.+.+++.+|
T Consensus 168 p~~i~~g~~D~l~--~~~~~~~~~L~~~gv~v~~~~~~g~~H 207 (211)
T PF07859_consen 168 PTLIIHGEDDVLV--DDSLRFAEKLKKAGVDVELHVYPGMPH 207 (211)
T ss_dssp EEEEEEETTSTTH--HHHHHHHHHHHHTT-EEEEEEETTEET
T ss_pred Ceeeeccccccch--HHHHHHHHHHHHCCCCEEEEEECCCeE
Confidence 5666888888876 578999999999999999999999999
No 53
>PLN03087 BODYGUARD 1 domain containing hydrolase; Provisional
Probab=95.80 E-value=0.89 Score=44.14 Aligned_cols=49 Identities=8% Similarity=0.066 Sum_probs=37.8
Q ss_pred CCCCeEEEecCCCCcCChhHHHHHHHHHHHcCCcEEEEEcCCCCCCCCcCCccccccccCc
Q 045563 209 PACPHLYLYSTGDKVIPYQSVELLIEEQRKTGRKVFSVILGHLPTWITSGLSPADTYRSYI 269 (271)
Q Consensus 209 ~~~p~LyiYS~~D~li~~~~Ve~~~~~~r~~G~~V~~~~f~~S~H~~~~~~~~v~H~r~~p 269 (271)
..+|.|+|+++.|.++|.+..+..++... +++.+.+++++| ..++-.+|
T Consensus 417 I~vPtLII~Ge~D~ivP~~~~~~la~~iP----~a~l~vI~~aGH--------~~~v~e~p 465 (481)
T PLN03087 417 LKCDVAIFHGGDDELIPVECSYAVKAKVP----RARVKVIDDKDH--------ITIVVGRQ 465 (481)
T ss_pred CCCCEEEEEECCCCCCCHHHHHHHHHhCC----CCEEEEeCCCCC--------cchhhcCH
Confidence 46899999999999999998877644431 367788999999 76654333
No 54
>KOG2382 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=95.77 E-value=1.5 Score=40.12 Aligned_cols=222 Identities=15% Similarity=0.194 Sum_probs=110.9
Q ss_pred CccEEEEEccCCCchHHHHHHH-HHHhhCCcceEEEeecccceeecccchhhhhhHHHHHHHHHHhhcccccCCCCceEE
Q 045563 2 TAVTVVLLGWLGARRKHLRRYV-EWYNSRGINAITFVVEAKELLSFDLGRGVEKRIADLSNEIVSWVSHEEQDGKQRCLI 80 (271)
Q Consensus 2 ~~~lVvl~gW~ga~~khl~KY~-~~Y~~~g~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~l~~~~~~~~~~~il 80 (271)
.+|++++-|-.|+.. +-.-.. ++=++++-.+..+-.+-. ..+|....- .-..+++.+..++..........++.
T Consensus 52 ~Pp~i~lHGl~GS~~-Nw~sv~k~Ls~~l~~~v~~vd~RnH-G~Sp~~~~h---~~~~ma~dv~~Fi~~v~~~~~~~~~~ 126 (315)
T KOG2382|consen 52 APPAIILHGLLGSKE-NWRSVAKNLSRKLGRDVYAVDVRNH-GSSPKITVH---NYEAMAEDVKLFIDGVGGSTRLDPVV 126 (315)
T ss_pred CCceEEecccccCCC-CHHHHHHHhcccccCceEEEecccC-CCCcccccc---CHHHHHHHHHHHHHHcccccccCCce
Confidence 579999999999884 333333 334556665555543332 222221100 12355666665555443333578999
Q ss_pred EEecccchHHHHHHHHHHhcCCCCccCCeeEEEEeCCCCCCC-ChhhhhhhhhhhhhcccccccccccccCccccccccc
Q 045563 81 FHTFSNTGWFVCGSILASLQGREDLMQKIKGLIVDSGGAGAF-DPKVWAGGFGAAILKKRSSSAYSTVEDGKINGLEGQV 159 (271)
Q Consensus 81 ~H~FSnGG~~~~~~l~~~l~~~~~~~~~i~g~I~DS~Pg~~~-~~~~~~~g~~~a~l~~~~~~~~~~~~~~~l~~~~~~~ 159 (271)
++..|+|| .-.++...++. .. ..-+.+|.|.+|+... .......-|.+ +.... ... +...|
T Consensus 127 l~GHsmGG--~~~~m~~t~~~-p~--~~~rliv~D~sP~~~~~~~~e~~e~i~~-m~~~d-~~~------~~~~~----- 188 (315)
T KOG2382|consen 127 LLGHSMGG--VKVAMAETLKK-PD--LIERLIVEDISPGGVGRSYGEYRELIKA-MIQLD-LSI------GVSRG----- 188 (315)
T ss_pred ecccCcch--HHHHHHHHHhc-Cc--ccceeEEEecCCccCCcccchHHHHHHH-HHhcc-ccc------ccccc-----
Confidence 99999999 33344444432 22 2567899999996322 11111111111 11100 000 00000
Q ss_pred ccccccCCchHHHHHH----HHH-HHHHH--------HHHHhcchhhHHHHHH-----HHHHhhcCCCCCCeEEEecCCC
Q 045563 160 SVSMMQDKEPDIIETM----LLS-LLEKL--------FSYIINLPDVNQRIKK-----VVSAVTNNPPACPHLYLYSTGD 221 (271)
Q Consensus 160 ~~~~~~~~~~~~~~~~----~~~-~~~~~--------~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~p~LyiYS~~D 221 (271)
. +++ .+..+... +.. +...+ |.+..+.+.+.+.+.+ ++..+.+.+...|.|++-...+
T Consensus 189 r-ke~---~~~l~~~~~d~~~~~fi~~nl~~~~~~~s~~w~~nl~~i~~~~~~~~~~s~~~~l~~~~~~~pvlfi~g~~S 264 (315)
T KOG2382|consen 189 R-KEA---LKSLIEVGFDNLVRQFILTNLKKSPSDGSFLWRVNLDSIASLLDEYEILSYWADLEDGPYTGPVLFIKGLQS 264 (315)
T ss_pred H-HHH---HHHHHHHhcchHHHHHHHHhcCcCCCCCceEEEeCHHHHHHHHHHHHhhcccccccccccccceeEEecCCC
Confidence 0 000 01111100 000 00000 0111112223233322 3455555778899999999999
Q ss_pred CcCChhHHHHHHHHHHHcCCcEEEEEcCCCCCC
Q 045563 222 KVIPYQSVELLIEEQRKTGRKVFSVILGHLPTW 254 (271)
Q Consensus 222 ~li~~~~Ve~~~~~~r~~G~~V~~~~f~~S~H~ 254 (271)
..++-+...+......+ |+.+.++++.||
T Consensus 265 ~fv~~~~~~~~~~~fp~----~e~~~ld~aGHw 293 (315)
T KOG2382|consen 265 KFVPDEHYPRMEKIFPN----VEVHELDEAGHW 293 (315)
T ss_pred CCcChhHHHHHHHhccc----hheeecccCCce
Confidence 99998765554443333 777889999994
No 55
>PLN02965 Probable pheophorbidase
Probab=95.76 E-value=0.99 Score=39.19 Aligned_cols=104 Identities=13% Similarity=0.049 Sum_probs=60.8
Q ss_pred CccEEEEEccCCCchHHHHHHHHHHhhCCcceEEEeecccceeecccchhhhhhHHHHHHHHHHhhcccccCCCCceEEE
Q 045563 2 TAVTVVLLGWLGARRKHLRRYVEWYNSRGINAITFVVEAKELLSFDLGRGVEKRIADLSNEIVSWVSHEEQDGKQRCLIF 81 (271)
Q Consensus 2 ~~~lVvl~gW~ga~~khl~KY~~~Y~~~g~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~l~~~~~~~~~~~il~ 81 (271)
+..+|++-||..... .-..-++...+.++.++.+-.+..-.-....+ ..-.+..+++.+.+++.+.. ...++++
T Consensus 3 ~~~vvllHG~~~~~~-~w~~~~~~L~~~~~~via~Dl~G~G~S~~~~~--~~~~~~~~a~dl~~~l~~l~---~~~~~~l 76 (255)
T PLN02965 3 EIHFVFVHGASHGAW-CWYKLATLLDAAGFKSTCVDLTGAGISLTDSN--TVSSSDQYNRPLFALLSDLP---PDHKVIL 76 (255)
T ss_pred ceEEEEECCCCCCcC-cHHHHHHHHhhCCceEEEecCCcCCCCCCCcc--ccCCHHHHHHHHHHHHHhcC---CCCCEEE
Confidence 457999999985543 23444455556788888887655321110000 01124566777777765431 1258999
Q ss_pred EecccchHHHHHHHHHHhcCCCCccCCeeEEEEeCCC
Q 045563 82 HTFSNTGWFVCGSILASLQGREDLMQKIKGLIVDSGG 118 (271)
Q Consensus 82 H~FSnGG~~~~~~l~~~l~~~~~~~~~i~g~I~DS~P 118 (271)
-..|.||.... .++.. + ..+++++|+-++.
T Consensus 77 vGhSmGG~ia~-~~a~~---~---p~~v~~lvl~~~~ 106 (255)
T PLN02965 77 VGHSIGGGSVT-EALCK---F---TDKISMAIYVAAA 106 (255)
T ss_pred EecCcchHHHH-HHHHh---C---chheeEEEEEccc
Confidence 99999996443 22221 2 2567888876654
No 56
>COG3545 Predicted esterase of the alpha/beta hydrolase fold [General function prediction only]
Probab=95.76 E-value=0.23 Score=41.52 Aligned_cols=146 Identities=16% Similarity=0.210 Sum_probs=88.1
Q ss_pred CCccEEEEEccCCCchHHHHHHHHHHhhCCcceEEEeecccceeecccchhhhhhHHHHHHHHHHhhcccccCCCCceEE
Q 045563 1 ETAVTVVLLGWLGARRKHLRRYVEWYNSRGINAITFVVEAKELLSFDLGRGVEKRIADLSNEIVSWVSHEEQDGKQRCLI 80 (271)
Q Consensus 1 ~~~~lVvl~gW~ga~~khl~KY~~~Y~~~g~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~l~~~~~~~~~~~il 80 (271)
++..++++-|+-|+.+.| |-..|.+..+++.++..+..+. | .+.+-+..+.+.+...+ .+.-++
T Consensus 1 ~~~~~lIVpG~~~Sg~~H---Wq~~we~~l~~a~rveq~~w~~--P--------~~~dWi~~l~~~v~a~~---~~~vlV 64 (181)
T COG3545 1 KMTDVLIVPGYGGSGPNH---WQSRWESALPNARRVEQDDWEA--P--------VLDDWIARLEKEVNAAE---GPVVLV 64 (181)
T ss_pred CCceEEEecCCCCCChhH---HHHHHHhhCccchhcccCCCCC--C--------CHHHHHHHHHHHHhccC---CCeEEE
Confidence 356789999999999887 7778889999876666443221 1 12233333333332211 123444
Q ss_pred EEecccchHHHHHHHHHHhcCCCCccCCeeEEEEeCCCCCCCChhhhhhhhhhhhhcccccccccccccCcccccccccc
Q 045563 81 FHTFSNTGWFVCGSILASLQGREDLMQKIKGLIVDSGGAGAFDPKVWAGGFGAAILKKRSSSAYSTVEDGKINGLEGQVS 160 (271)
Q Consensus 81 ~H~FSnGG~~~~~~l~~~l~~~~~~~~~i~g~I~DS~Pg~~~~~~~~~~g~~~a~l~~~~~~~~~~~~~~~l~~~~~~~~ 160 (271)
-|++ |. .+..+.+.... .+|.|.++=+.|.... +.. .++.
T Consensus 65 AHSL--Gc-~~v~h~~~~~~------~~V~GalLVAppd~~~-~~~---------~~~~--------------------- 104 (181)
T COG3545 65 AHSL--GC-ATVAHWAEHIQ------RQVAGALLVAPPDVSR-PEI---------RPKH--------------------- 104 (181)
T ss_pred Eecc--cH-HHHHHHHHhhh------hccceEEEecCCCccc-ccc---------chhh---------------------
Confidence 5554 44 56555555543 2889999987777542 100 0000
Q ss_pred cccccCCchHHHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHhhcCCCCCCeEEEecCCCCcCChhHHHHHHHHHHHc
Q 045563 161 VSMMQDKEPDIIETMLLSLLEKLFSYIINLPDVNQRIKKVVSAVTNNPPACPHLYLYSTGDKVIPYQSVELLIEEQRKT 239 (271)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~LyiYS~~D~li~~~~Ve~~~~~~r~~ 239 (271)
+..+...| ..+..-|.+.+-|++|+.++++.-|++++.+-..
T Consensus 105 -----------------------~~tf~~~p--------------~~~lpfps~vvaSrnDp~~~~~~a~~~a~~wgs~ 146 (181)
T COG3545 105 -----------------------LMTFDPIP--------------REPLPFPSVVVASRNDPYVSYEHAEDLANAWGSA 146 (181)
T ss_pred -----------------------ccccCCCc--------------cccCCCceeEEEecCCCCCCHHHHHHHHHhccHh
Confidence 00011111 1345678999999999999999999999888763
No 57
>PLN02578 hydrolase
Probab=95.52 E-value=1.7 Score=40.10 Aligned_cols=40 Identities=20% Similarity=0.203 Sum_probs=29.9
Q ss_pred CCCCeEEEecCCCCcCChhHHHHHHHHHHHcCCcEEEEEcCCCCC
Q 045563 209 PACPHLYLYSTGDKVIPYQSVELLIEEQRKTGRKVFSVILGHLPT 253 (271)
Q Consensus 209 ~~~p~LyiYS~~D~li~~~~Ve~~~~~~r~~G~~V~~~~f~~S~H 253 (271)
..+|.|+|+++.|.++|.+..++..+... +.++ +.+ ++.|
T Consensus 295 i~~PvLiI~G~~D~~v~~~~~~~l~~~~p--~a~l--~~i-~~GH 334 (354)
T PLN02578 295 LSCPLLLLWGDLDPWVGPAKAEKIKAFYP--DTTL--VNL-QAGH 334 (354)
T ss_pred CCCCEEEEEeCCCCCCCHHHHHHHHHhCC--CCEE--EEe-CCCC
Confidence 47999999999999999998877655432 3333 344 5899
No 58
>PRK10115 protease 2; Provisional
Probab=94.83 E-value=0.61 Score=47.30 Aligned_cols=44 Identities=18% Similarity=0.174 Sum_probs=39.8
Q ss_pred CCCeE-EEecCCCCcCChhHHHHHHHHHHHcCCcEEEEEc---CCCCC
Q 045563 210 ACPHL-YLYSTGDKVIPYQSVELLIEEQRKTGRKVFSVIL---GHLPT 253 (271)
Q Consensus 210 ~~p~L-yiYS~~D~li~~~~Ve~~~~~~r~~G~~V~~~~f---~~S~H 253 (271)
..|.| .+-|.+|.-||+.+-+++++..|++|.++....| .+++|
T Consensus 605 ~~P~lLi~~g~~D~RV~~~~~~k~~a~Lr~~~~~~~~vl~~~~~~~GH 652 (686)
T PRK10115 605 AYPHLLVTTGLHDSQVQYWEPAKWVAKLRELKTDDHLLLLCTDMDSGH 652 (686)
T ss_pred CCCceeEEecCCCCCcCchHHHHHHHHHHhcCCCCceEEEEecCCCCC
Confidence 67855 5699999999999999999999999999888888 88999
No 59
>PRK05855 short chain dehydrogenase; Validated
Probab=94.66 E-value=0.48 Score=46.02 Aligned_cols=84 Identities=10% Similarity=0.077 Sum_probs=48.0
Q ss_pred ccEEEEEccCCCchHHHHHHHHHHhhCCcceEEEeecccceeecccchhhhhhHHHHHHHHHHhhcccccCCCCceEEEE
Q 045563 3 AVTVVLLGWLGARRKHLRRYVEWYNSRGINAITFVVEAKELLSFDLGRGVEKRIADLSNEIVSWVSHEEQDGKQRCLIFH 82 (271)
Q Consensus 3 ~~lVvl~gW~ga~~khl~KY~~~Y~~~g~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~l~~~~~~~~~~~il~H 82 (271)
+++|++-||.+... +-.+..+.. ..++.++.+..+..- .+........-.+..+++.+.+++.... ...++++.
T Consensus 26 ~~ivllHG~~~~~~-~w~~~~~~L-~~~~~Vi~~D~~G~G-~S~~~~~~~~~~~~~~a~dl~~~i~~l~---~~~~~~lv 99 (582)
T PRK05855 26 PTVVLVHGYPDNHE-VWDGVAPLL-ADRFRVVAYDVRGAG-RSSAPKRTAAYTLARLADDFAAVIDAVS---PDRPVHLL 99 (582)
T ss_pred CeEEEEcCCCchHH-HHHHHHHHh-hcceEEEEecCCCCC-CCCCCCcccccCHHHHHHHHHHHHHHhC---CCCcEEEE
Confidence 57999999986653 435556555 567777776655421 1110000000124556666666654321 24579999
Q ss_pred ecccchHHHH
Q 045563 83 TFSNTGWFVC 92 (271)
Q Consensus 83 ~FSnGG~~~~ 92 (271)
.+|.||...+
T Consensus 100 GhS~Gg~~a~ 109 (582)
T PRK05855 100 AHDWGSIQGW 109 (582)
T ss_pred ecChHHHHHH
Confidence 9999996543
No 60
>PF03583 LIP: Secretory lipase ; InterPro: IPR005152 This entry represents a family of secreted lipases. Family members include the LIP lipases from Candida albicans, which are expressed and secreted during the infection cycle of these pathogens [].; GO: 0004806 triglyceride lipase activity, 0016042 lipid catabolic process
Probab=93.81 E-value=0.16 Score=45.82 Aligned_cols=48 Identities=23% Similarity=0.249 Sum_probs=44.6
Q ss_pred cCCCCCCeEEEecCCCCcCChhHHHHHHHHHHHcC-CcEEEEEcCCCCC
Q 045563 206 NNPPACPHLYLYSTGDKVIPYQSVELLIEEQRKTG-RKVFSVILGHLPT 253 (271)
Q Consensus 206 ~~~~~~p~LyiYS~~D~li~~~~Ve~~~~~~r~~G-~~V~~~~f~~S~H 253 (271)
+..+..|.+...|..|.+||....++.++++.++| .+|+-+...+..|
T Consensus 215 ~~~P~~Pv~i~~g~~D~vvP~~~~~~l~~~~c~~G~a~V~~~~~~~~~H 263 (290)
T PF03583_consen 215 DWTPTVPVLIYQGTADEVVPPADTDALVAKWCAAGGADVEYVRYPGGGH 263 (290)
T ss_pred CCCCCCCEEEEecCCCCCCChHHHHHHHHHHHHcCCCCEEEEecCCCCh
Confidence 44568999999999999999999999999999999 7999999999999
No 61
>TIGR01840 esterase_phb esterase, PHB depolymerase family. This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi.
Probab=93.23 E-value=4.6 Score=34.15 Aligned_cols=30 Identities=10% Similarity=0.067 Sum_probs=25.7
Q ss_pred CCCe-EEEecCCCCcCChhHHHHHHHHHHHc
Q 045563 210 ACPH-LYLYSTGDKVIPYQSVELLIEEQRKT 239 (271)
Q Consensus 210 ~~p~-LyiYS~~D~li~~~~Ve~~~~~~r~~ 239 (271)
..|. +.+.++.|.+||.+..++.++..++.
T Consensus 167 ~~p~~~i~hG~~D~vVp~~~~~~~~~~l~~~ 197 (212)
T TIGR01840 167 PTPIMSVVHGDADYTVLPGNADEIRDAMLKV 197 (212)
T ss_pred CCCeEEEEEcCCCceeCcchHHHHHHHHHHh
Confidence 3455 46789999999999999999999885
No 62
>PRK11126 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional
Probab=92.88 E-value=1.2 Score=37.92 Aligned_cols=102 Identities=17% Similarity=0.095 Sum_probs=60.6
Q ss_pred CccEEEEEccCCCchHHHHHHHHHHhhCCcceEEEeecccceeecccchhhhhhHHHHHHHHHHhhcccccCCCCceEEE
Q 045563 2 TAVTVVLLGWLGARRKHLRRYVEWYNSRGINAITFVVEAKELLSFDLGRGVEKRIADLSNEIVSWVSHEEQDGKQRCLIF 81 (271)
Q Consensus 2 ~~~lVvl~gW~ga~~khl~KY~~~Y~~~g~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~l~~~~~~~~~~~il~ 81 (271)
.+++|++.||.++.... .+..... .+++++.+-.+..-.-.... ...++..++.+.+.+++. ...++++
T Consensus 2 ~p~vvllHG~~~~~~~w-~~~~~~l--~~~~vi~~D~~G~G~S~~~~----~~~~~~~~~~l~~~l~~~----~~~~~~l 70 (242)
T PRK11126 2 LPWLVFLHGLLGSGQDW-QPVGEAL--PDYPRLYIDLPGHGGSAAIS----VDGFADVSRLLSQTLQSY----NILPYWL 70 (242)
T ss_pred CCEEEEECCCCCChHHH-HHHHHHc--CCCCEEEecCCCCCCCCCcc----ccCHHHHHHHHHHHHHHc----CCCCeEE
Confidence 35799999999877533 5555544 25777776655431111110 113556677777776543 2568999
Q ss_pred EecccchHHHHHHHHHHhcCCCCccCCeeEEEEeCCCCC
Q 045563 82 HTFSNTGWFVCGSILASLQGREDLMQKIKGLIVDSGGAG 120 (271)
Q Consensus 82 H~FSnGG~~~~~~l~~~l~~~~~~~~~i~g~I~DS~Pg~ 120 (271)
-.+|.||...+ .+... +++ ..++++|+.+++..
T Consensus 71 vG~S~Gg~va~-~~a~~---~~~--~~v~~lvl~~~~~~ 103 (242)
T PRK11126 71 VGYSLGGRIAM-YYACQ---GLA--GGLCGLIVEGGNPG 103 (242)
T ss_pred EEECHHHHHHH-HHHHh---CCc--ccccEEEEeCCCCC
Confidence 99999996443 32222 211 23888888876643
No 63
>cd00707 Pancreat_lipase_like Pancreatic lipase-like enzymes. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=91.05 E-value=2.1 Score=38.31 Aligned_cols=93 Identities=12% Similarity=0.100 Sum_probs=49.3
Q ss_pred CccEEEEEccCCCc-hHHHHHHHHHHhh-CCcceEEEeecccceeecccchhhhhhHHHHHHHHHHh---hcccccCCCC
Q 045563 2 TAVTVVLLGWLGAR-RKHLRRYVEWYNS-RGINAITFVVEAKELLSFDLGRGVEKRIADLSNEIVSW---VSHEEQDGKQ 76 (271)
Q Consensus 2 ~~~lVvl~gW~ga~-~khl~KY~~~Y~~-~g~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~---l~~~~~~~~~ 76 (271)
.+++|++-||++.. ........+.|.+ .+++++.+.-+... .... ......+..+.+.+.++ +.+... ...
T Consensus 36 ~p~vilIHG~~~~~~~~~~~~l~~~ll~~~~~nVi~vD~~~~~--~~~y-~~a~~~~~~v~~~la~~l~~L~~~~g-~~~ 111 (275)
T cd00707 36 RPTRFIIHGWTSSGEESWISDLRKAYLSRGDYNVIVVDWGRGA--NPNY-PQAVNNTRVVGAELAKFLDFLVDNTG-LSL 111 (275)
T ss_pred CCcEEEEcCCCCCCCCcHHHHHHHHHHhcCCCEEEEEECcccc--ccCh-HHHHHhHHHHHHHHHHHHHHHHHhcC-CCh
Confidence 35789999999877 4445555665654 46888777644321 0110 01111222222222222 222111 134
Q ss_pred ceEEEEecccchHHHHHHHHHHh
Q 045563 77 RCLIFHTFSNTGWFVCGSILASL 99 (271)
Q Consensus 77 ~~il~H~FSnGG~~~~~~l~~~l 99 (271)
.++.+=.+|.||- ..+.+...+
T Consensus 112 ~~i~lIGhSlGa~-vAg~~a~~~ 133 (275)
T cd00707 112 ENVHLIGHSLGAH-VAGFAGKRL 133 (275)
T ss_pred HHEEEEEecHHHH-HHHHHHHHh
Confidence 6899999999994 555555444
No 64
>PF10503 Esterase_phd: Esterase PHB depolymerase
Probab=90.98 E-value=9.8 Score=33.00 Aligned_cols=30 Identities=17% Similarity=0.296 Sum_probs=27.1
Q ss_pred CCCeEEEecCCCCcCChhHHHHHHHHHHHc
Q 045563 210 ACPHLYLYSTGDKVIPYQSVELLIEEQRKT 239 (271)
Q Consensus 210 ~~p~LyiYS~~D~li~~~~Ve~~~~~~r~~ 239 (271)
..|++.+.+++|..|...--++.++.+.+.
T Consensus 169 ~~P~~v~hG~~D~tV~~~n~~~~~~q~~~~ 198 (220)
T PF10503_consen 169 GYPRIVFHGTADTTVNPQNADQLVAQWLNV 198 (220)
T ss_pred CCCEEEEecCCCCccCcchHHHHHHHHHHc
Confidence 568999999999999999999999998874
No 65
>TIGR03101 hydr2_PEP hydrolase, ortholog 2, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 1, TIGR03100) of the same superfamily.
Probab=90.71 E-value=2.6 Score=37.59 Aligned_cols=51 Identities=12% Similarity=0.070 Sum_probs=36.9
Q ss_pred CCeEEEe-c-CCCCcCChhHHHHHHHHHHHcCCcEEEEEcCCCCCCCCcCCcc
Q 045563 211 CPHLYLY-S-TGDKVIPYQSVELLIEEQRKTGRKVFSVILGHLPTWITSGLSP 261 (271)
Q Consensus 211 ~p~LyiY-S-~~D~li~~~~Ve~~~~~~r~~G~~V~~~~f~~S~H~~~~~~~~ 261 (271)
.++.++. . ..+.=-+.....+.++.++++|++|+...|.|=+=|.|..+|-
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~v~~~~~~~~~~~~~~~~~~ 253 (266)
T TIGR03101 201 NCPVHWFEVRPEEGATLSPVFSRLGEQWVQSGVEVTVDLVPGPAFWQTQEIEE 253 (266)
T ss_pred CCceEEEEeccccCCCCCHHHHHHHHHHHHcCCeEeeeecCCchhhcchhhhH
Confidence 3455544 3 2333445668899999999999999999999887777666553
No 66
>TIGR01839 PHA_synth_II poly(R)-hydroxyalkanoic acid synthase, class II. This model represents the class II subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs, typically with six to fourteen carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=90.58 E-value=19 Score=35.66 Aligned_cols=50 Identities=24% Similarity=0.293 Sum_probs=37.5
Q ss_pred CCCeEEEecCCCCcCChhHHHHHHHHHHHcCCcEEEEEcCCCCCCCCcCCccccc
Q 045563 210 ACPHLYLYSTGDKVIPYQSVELLIEEQRKTGRKVFSVILGHLPTWITSGLSPADT 264 (271)
Q Consensus 210 ~~p~LyiYS~~D~li~~~~Ve~~~~~~r~~G~~V~~~~f~~S~H~~~~~~~~v~H 264 (271)
.+|-+.+.++.|.|+||+.+....+.. |-+++- ....|+| |.+-++|-+|
T Consensus 441 ~~Pvl~va~~~DHIvPw~s~~~~~~l~---gs~~~f-vl~~gGH-IggivnpP~~ 490 (560)
T TIGR01839 441 KCDSFSVAGTNDHITPWDAVYRSALLL---GGKRRF-VLSNSGH-IQSILNPPGN 490 (560)
T ss_pred CCCeEEEecCcCCcCCHHHHHHHHHHc---CCCeEE-EecCCCc-cccccCCCCC
Confidence 789999999999999999998886543 447654 4456999 5555555554
No 67
>PLN02980 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding / thiamin pyrophosphate binding
Probab=90.52 E-value=21 Score=40.20 Aligned_cols=106 Identities=10% Similarity=0.101 Sum_probs=56.4
Q ss_pred ccEEEEEccCCCchHHHHHHHHHHhhCCcceEEEeeccccee-eccc----chhhhhhHHHHHHHHHHhhcccccCCCCc
Q 045563 3 AVTVVLLGWLGARRKHLRRYVEWYNSRGINAITFVVEAKELL-SFDL----GRGVEKRIADLSNEIVSWVSHEEQDGKQR 77 (271)
Q Consensus 3 ~~lVvl~gW~ga~~khl~KY~~~Y~~~g~~~l~~~~~~~~~~-~~~~----g~~~~~~~~~~~~~i~~~l~~~~~~~~~~ 77 (271)
+++|++.||++..... ....+... ..++++.+..+..-.. .+.. .......++.+++.+.+++++. ...
T Consensus 1372 ~~vVllHG~~~s~~~w-~~~~~~L~-~~~rVi~~Dl~G~G~S~~~~~~~~~~~~~~~si~~~a~~l~~ll~~l----~~~ 1445 (1655)
T PLN02980 1372 SVVLFLHGFLGTGEDW-IPIMKAIS-GSARCISIDLPGHGGSKIQNHAKETQTEPTLSVELVADLLYKLIEHI----TPG 1445 (1655)
T ss_pred CeEEEECCCCCCHHHH-HHHHHHHh-CCCEEEEEcCCCCCCCCCccccccccccccCCHHHHHHHHHHHHHHh----CCC
Confidence 5899999999887542 33333332 3456666654432111 0000 0000113456666666665432 245
Q ss_pred eEEEEecccchHHHHHHHHHHhcCCCCccCCeeEEE-EeCCCCCC
Q 045563 78 CLIFHTFSNTGWFVCGSILASLQGREDLMQKIKGLI-VDSGGAGA 121 (271)
Q Consensus 78 ~il~H~FSnGG~~~~~~l~~~l~~~~~~~~~i~g~I-~DS~Pg~~ 121 (271)
++.+=.+|+||...+ .+... ++ ..++++| +++.|+..
T Consensus 1446 ~v~LvGhSmGG~iAl-~~A~~---~P---~~V~~lVlis~~p~~~ 1483 (1655)
T PLN02980 1446 KVTLVGYSMGARIAL-YMALR---FS---DKIEGAVIISGSPGLK 1483 (1655)
T ss_pred CEEEEEECHHHHHHH-HHHHh---Ch---HhhCEEEEECCCCccC
Confidence 788899999996544 33222 22 3566665 56666643
No 68
>KOG4391 consensus Predicted alpha/beta hydrolase BEM46 [General function prediction only]
Probab=87.11 E-value=11 Score=33.10 Aligned_cols=183 Identities=13% Similarity=0.080 Sum_probs=95.8
Q ss_pred cEEEEEccCCCchHHHHHHHHHHhhCCcceEEEeecccceeecccchhhhhhHHHHHHHHHHhhcccccCCCCceEEEEe
Q 045563 4 VTVVLLGWLGARRKHLRRYVEWYNSRGINAITFVVEAKELLSFDLGRGVEKRIADLSNEIVSWVSHEEQDGKQRCLIFHT 83 (271)
Q Consensus 4 ~lVvl~gW~ga~~khl~KY~~~Y~~~g~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~l~~~~~~~~~~~il~H~ 83 (271)
.|..+++=+|.--..+.-=--.|+.++.|++++.-+.-- .+.|...++-++-=++.+++++.+.+ .-+...|++-.
T Consensus 80 TlLyfh~NAGNmGhr~~i~~~fy~~l~mnv~ivsYRGYG---~S~GspsE~GL~lDs~avldyl~t~~-~~dktkivlfG 155 (300)
T KOG4391|consen 80 TLLYFHANAGNMGHRLPIARVFYVNLKMNVLIVSYRGYG---KSEGSPSEEGLKLDSEAVLDYLMTRP-DLDKTKIVLFG 155 (300)
T ss_pred eEEEEccCCCcccchhhHHHHHHHHcCceEEEEEeeccc---cCCCCccccceeccHHHHHHHHhcCc-cCCcceEEEEe
Confidence 444444444332222333344599999999998866521 12232223334444566677775543 23577999999
Q ss_pred cccchHHHHHHHHHHhcCCCCccCCeeEEEEeCCCCCCCChhhhhhhhhhhhhcccccccccccccCccccccccccccc
Q 045563 84 FSNTGWFVCGSILASLQGREDLMQKIKGLIVDSGGAGAFDPKVWAGGFGAAILKKRSSSAYSTVEDGKINGLEGQVSVSM 163 (271)
Q Consensus 84 FSnGG~~~~~~l~~~l~~~~~~~~~i~g~I~DS~Pg~~~~~~~~~~g~~~a~l~~~~~~~~~~~~~~~l~~~~~~~~~~~ 163 (271)
=|-||+... + + ..+-..++.++|+.-+=- +++.-..+
T Consensus 156 rSlGGAvai-~----l--ask~~~ri~~~ivENTF~----------SIp~~~i~-------------------------- 192 (300)
T KOG4391|consen 156 RSLGGAVAI-H----L--ASKNSDRISAIIVENTFL----------SIPHMAIP-------------------------- 192 (300)
T ss_pred cccCCeeEE-E----e--eccchhheeeeeeechhc----------cchhhhhh--------------------------
Confidence 999996321 1 1 122234777777763211 11110000
Q ss_pred ccCCchHHHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHhhcCCCCCCeEEEecCCCCcCChhHHHHHHHHHHHcCCcE
Q 045563 164 MQDKEPDIIETMLLSLLEKLFSYIINLPDVNQRIKKVVSAVTNNPPACPHLYLYSTGDKVIPYQSVELLIEEQRKTGRKV 243 (271)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~LyiYS~~D~li~~~~Ve~~~~~~r~~G~~V 243 (271)
.-.|+.++++-.+.. . +.+. . .+.+. ..+.|.|||-+..|.+||+.......+..-.. .-
T Consensus 193 --~v~p~~~k~i~~lc~----k--------n~~~-S-~~ki~--~~~~P~LFiSGlkDelVPP~~Mr~Ly~~c~S~--~K 252 (300)
T KOG4391|consen 193 --LVFPFPMKYIPLLCY----K--------NKWL-S-YRKIG--QCRMPFLFISGLKDELVPPVMMRQLYELCPSR--TK 252 (300)
T ss_pred --eeccchhhHHHHHHH----H--------hhhc-c-hhhhc--cccCceEEeecCccccCCcHHHHHHHHhCchh--hh
Confidence 001211121111110 0 0000 0 11111 34789999999999999999988888765332 22
Q ss_pred EEEEcCCCCC
Q 045563 244 FSVILGHLPT 253 (271)
Q Consensus 244 ~~~~f~~S~H 253 (271)
+...|.+..|
T Consensus 253 rl~eFP~gtH 262 (300)
T KOG4391|consen 253 RLAEFPDGTH 262 (300)
T ss_pred hheeCCCCcc
Confidence 3456999888
No 69
>PF08840 BAAT_C: BAAT / Acyl-CoA thioester hydrolase C terminal; InterPro: IPR014940 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH), providing the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH. Bile acid-CoA:amino acid N-acetyltransferase (BAAT) is involved in bile acid metabolism and may also act as an acyl-CoA thioesterase that regulates intracellular levels of free fatty acids []. This entry represents a catalytic domain is found at the C terminus of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases. ; PDB: 3K2I_B 3HLK_B.
Probab=86.45 E-value=1.1 Score=38.51 Aligned_cols=48 Identities=21% Similarity=0.218 Sum_probs=31.9
Q ss_pred CCCeEEEecCCCCcCChhHHHHHHHH-HHHcCCc--EEEEEcCCCCCCCCc
Q 045563 210 ACPHLYLYSTGDKVIPYQSVELLIEE-QRKTGRK--VFSVILGHLPTWITS 257 (271)
Q Consensus 210 ~~p~LyiYS~~D~li~~~~Ve~~~~~-~r~~G~~--V~~~~f~~S~H~~~~ 257 (271)
.+|-|+|.|++|.+.|..+.-+.+.+ .++.|.+ ++...|++++|.|..
T Consensus 115 ~~piLli~g~dD~~WpS~~~a~~i~~rL~~~~~~~~~~~l~Y~~aGH~i~~ 165 (213)
T PF08840_consen 115 KGPILLISGEDDQIWPSSEMAEQIEERLKAAGFPHNVEHLSYPGAGHLIEP 165 (213)
T ss_dssp -SEEEEEEETT-SSS-HHHHHHHHHHHHHCTT-----EEEEETTB-S---S
T ss_pred CCCEEEEEeCCCCccchHHHHHHHHHHHHHhCCCCcceEEEcCCCCceecC
Confidence 79999999999999999887666654 5666776 888999999997654
No 70
>PRK06765 homoserine O-acetyltransferase; Provisional
Probab=85.11 E-value=2 Score=40.49 Aligned_cols=50 Identities=10% Similarity=-0.028 Sum_probs=42.2
Q ss_pred CCCCeEEEecCCCCcCChhHHHHHHHHHHHcCCcEEEEEcCC-CCCCCCcCCccccccc
Q 045563 209 PACPHLYLYSTGDKVIPYQSVELLIEEQRKTGRKVFSVILGH-LPTWITSGLSPADTYR 266 (271)
Q Consensus 209 ~~~p~LyiYS~~D~li~~~~Ve~~~~~~r~~G~~V~~~~f~~-S~H~~~~~~~~v~H~r 266 (271)
..+|.|+|.++.|.++|.+..++.++.....|.+++.+.+++ ..| ..|+.
T Consensus 322 I~~PtLvI~G~~D~l~p~~~~~~la~~lp~~~~~a~l~~I~s~~GH--------~~~le 372 (389)
T PRK06765 322 IEANVLMIPCKQDLLQPPRYNYKMVDILQKQGKYAEVYEIESINGH--------MAGVF 372 (389)
T ss_pred CCCCEEEEEeCCCCCCCHHHHHHHHHHhhhcCCCeEEEEECCCCCc--------chhhc
Confidence 478999999999999999999998888776666788888875 899 77663
No 71
>PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A ....
Probab=84.63 E-value=0.93 Score=37.69 Aligned_cols=42 Identities=19% Similarity=0.233 Sum_probs=34.2
Q ss_pred CCCCCeEEEecCCCCcCChhHHHHHHHHHHHcCCcEEEEEcCCCCC
Q 045563 208 PPACPHLYLYSTGDKVIPYQSVELLIEEQRKTGRKVFSVILGHLPT 253 (271)
Q Consensus 208 ~~~~p~LyiYS~~D~li~~~~Ve~~~~~~r~~G~~V~~~~f~~S~H 253 (271)
...+|.|.++++.|.++|++.++...+... +.+.+.+++++|
T Consensus 173 ~i~~p~l~i~~~~D~~~p~~~~~~~~~~~~----~~~~~~~~~~GH 214 (230)
T PF00561_consen 173 NIKVPTLIIWGEDDPLVPPESSEQLAKLIP----NSQLVLIEGSGH 214 (230)
T ss_dssp TTTSEEEEEEETTCSSSHHHHHHHHHHHST----TEEEEEETTCCS
T ss_pred ccCCCeEEEEeCCCCCCCHHHHHHHHHhcC----CCEEEECCCCCh
Confidence 358999999999999999999988443222 377888999999
No 72
>PLN02872 triacylglycerol lipase
Probab=84.53 E-value=1.2 Score=42.21 Aligned_cols=46 Identities=20% Similarity=0.138 Sum_probs=36.1
Q ss_pred hcCCCCCCeEEEecCCCCcCChhHHHHHHHHHHHcCCcEEEEEcCCCCC
Q 045563 205 TNNPPACPHLYLYSTGDKVIPYQSVELLIEEQRKTGRKVFSVILGHLPT 253 (271)
Q Consensus 205 ~~~~~~~p~LyiYS~~D~li~~~~Ve~~~~~~r~~G~~V~~~~f~~S~H 253 (271)
.+.+...|.+.+||+.|.+++.+++++.+++... .++.+.+++..|
T Consensus 320 ~~i~~~~Pv~i~~G~~D~lv~~~dv~~l~~~Lp~---~~~l~~l~~~gH 365 (395)
T PLN02872 320 SLIPKSLPLWMGYGGTDGLADVTDVEHTLAELPS---KPELLYLENYGH 365 (395)
T ss_pred ccCCCCccEEEEEcCCCCCCCHHHHHHHHHHCCC---ccEEEEcCCCCC
Confidence 3333357999999999999999999988876543 346677899999
No 73
>PRK00175 metX homoserine O-acetyltransferase; Provisional
Probab=84.28 E-value=2.1 Score=39.87 Aligned_cols=45 Identities=13% Similarity=0.090 Sum_probs=39.0
Q ss_pred CCCCeEEEecCCCCcCChhHHHHHHHHHHHcCCcEEEEEc-CCCCC
Q 045563 209 PACPHLYLYSTGDKVIPYQSVELLIEEQRKTGRKVFSVIL-GHLPT 253 (271)
Q Consensus 209 ~~~p~LyiYS~~D~li~~~~Ve~~~~~~r~~G~~V~~~~f-~~S~H 253 (271)
..+|.|+|.++.|.++|.+..++.++.....|.+++.+.+ +++.|
T Consensus 308 I~~PtLvI~G~~D~~~p~~~~~~la~~i~~a~~~~~l~~i~~~~GH 353 (379)
T PRK00175 308 IKARFLVVSFTSDWLFPPARSREIVDALLAAGADVSYAEIDSPYGH 353 (379)
T ss_pred CCCCEEEEEECCccccCHHHHHHHHHHHHhcCCCeEEEEeCCCCCc
Confidence 4789999999999999999999998888777777777666 58999
No 74
>COG3208 GrsT Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=83.94 E-value=30 Score=30.56 Aligned_cols=205 Identities=12% Similarity=0.168 Sum_probs=104.3
Q ss_pred CccEEEEEccCCCchHHHHHHHHHHhhCCcce--EEEeecccceeecccchhhhhhHHHHHHHHHHhhcccccCCCCceE
Q 045563 2 TAVTVVLLGWLGARRKHLRRYVEWYNSRGINA--ITFVVEAKELLSFDLGRGVEKRIADLSNEIVSWVSHEEQDGKQRCL 79 (271)
Q Consensus 2 ~~~lVvl~gW~ga~~khl~KY~~~Y~~~g~~~--l~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~l~~~~~~~~~~~i 79 (271)
+++-++.|..+|+.... |..+-+++=.+. +.+..|...--. +......++.+++.|...+.. .....|.
T Consensus 6 ~~~~L~cfP~AGGsa~~---fr~W~~~lp~~iel~avqlPGR~~r~---~ep~~~di~~Lad~la~el~~---~~~d~P~ 76 (244)
T COG3208 6 ARLRLFCFPHAGGSASL---FRSWSRRLPADIELLAVQLPGRGDRF---GEPLLTDIESLADELANELLP---PLLDAPF 76 (244)
T ss_pred CCceEEEecCCCCCHHH---HHHHHhhCCchhheeeecCCCccccc---CCcccccHHHHHHHHHHHhcc---ccCCCCe
Confidence 34556778888887654 333333332223 334445543211 112234567788888765542 1236799
Q ss_pred EEEecccchHHHHHHHHHHhcCCCCccCCeeEEEEeCCCCC--CCChhhhhhhhh-hhhhcccccccccccccCcccccc
Q 045563 80 IFHTFSNTGWFVCGSILASLQGREDLMQKIKGLIVDSGGAG--AFDPKVWAGGFG-AAILKKRSSSAYSTVEDGKINGLE 156 (271)
Q Consensus 80 l~H~FSnGG~~~~~~l~~~l~~~~~~~~~i~g~I~DS~Pg~--~~~~~~~~~g~~-~a~l~~~~~~~~~~~~~~~l~~~~ 156 (271)
.+=..|+||. ....+...+++.+.. +.++.+=+|+.- ....+. .-.+ +.++.. +.+ +.|+.
T Consensus 77 alfGHSmGa~-lAfEvArrl~~~g~~---p~~lfisg~~aP~~~~~~~i--~~~~D~~~l~~-------l~~---lgG~p 140 (244)
T COG3208 77 ALFGHSMGAM-LAFEVARRLERAGLP---PRALFISGCRAPHYDRGKQI--HHLDDADFLAD-------LVD---LGGTP 140 (244)
T ss_pred eecccchhHH-HHHHHHHHHHHcCCC---cceEEEecCCCCCCcccCCc--cCCCHHHHHHH-------HHH---hCCCC
Confidence 9999999995 555676777653322 445555555442 211110 0001 112110 000 11211
Q ss_pred cccccccccCCchHHHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHhhcCCCCCCeEEEecCCCCcCChhHHHHHHHHH
Q 045563 157 GQVSVSMMQDKEPDIIETMLLSLLEKLFSYIINLPDVNQRIKKVVSAVTNNPPACPHLYLYSTGDKVIPYQSVELLIEEQ 236 (271)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~LyiYS~~D~li~~~~Ve~~~~~~ 236 (271)
...++ .+..+. +++.++.. ..++....+.-...+..||...+-++.|..|.++++.+..+.+
T Consensus 141 ----~e~le--d~El~~-l~LPilRA-----------D~~~~e~Y~~~~~~pl~~pi~~~~G~~D~~vs~~~~~~W~~~t 202 (244)
T COG3208 141 ----PELLE--DPELMA-LFLPILRA-----------DFRALESYRYPPPAPLACPIHAFGGEKDHEVSRDELGAWREHT 202 (244)
T ss_pred ----hHHhc--CHHHHH-HHHHHHHH-----------HHHHhcccccCCCCCcCcceEEeccCcchhccHHHHHHHHHhh
Confidence 11111 233222 12222211 0111111222223567899999999999999999988877776
Q ss_pred HHcCCcEEEEEcCCCCC
Q 045563 237 RKTGRKVFSVILGHLPT 253 (271)
Q Consensus 237 r~~G~~V~~~~f~~S~H 253 (271)
++ +.+.+.|+| .|
T Consensus 203 ~~---~f~l~~fdG-gH 215 (244)
T COG3208 203 KG---DFTLRVFDG-GH 215 (244)
T ss_pred cC---CceEEEecC-cc
Confidence 65 667777884 44
No 75
>TIGR03056 bchO_mg_che_rel putative magnesium chelatase accessory protein. Members of this family belong to the alpha/beta fold family hydrolases (PFAM model pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity.
Probab=83.46 E-value=2 Score=36.96 Aligned_cols=41 Identities=10% Similarity=0.010 Sum_probs=32.7
Q ss_pred CCCCeEEEecCCCCcCChhHHHHHHHHHHHcCCcEEEEEcCCCCC
Q 045563 209 PACPHLYLYSTGDKVIPYQSVELLIEEQRKTGRKVFSVILGHLPT 253 (271)
Q Consensus 209 ~~~p~LyiYS~~D~li~~~~Ve~~~~~~r~~G~~V~~~~f~~S~H 253 (271)
..+|.|+|+++.|.++|.+.+++.++... +++.+.++++.|
T Consensus 219 i~~P~lii~g~~D~~vp~~~~~~~~~~~~----~~~~~~~~~~gH 259 (278)
T TIGR03056 219 ITIPLHLIAGEEDKAVPPDESKRAATRVP----TATLHVVPGGGH 259 (278)
T ss_pred CCCCEEEEEeCCCcccCHHHHHHHHHhcc----CCeEEEECCCCC
Confidence 46899999999999999988887765443 245567899899
No 76
>KOG3043 consensus Predicted hydrolase related to dienelactone hydrolase [General function prediction only]
Probab=81.43 E-value=3.4 Score=36.03 Aligned_cols=44 Identities=16% Similarity=0.238 Sum_probs=35.9
Q ss_pred CCCeEEEecCCCCcCChhHHHHHHHHHHHcCC-cEEEEEcCCCCC
Q 045563 210 ACPHLYLYSTGDKVIPYQSVELLIEEQRKTGR-KVFSVILGHLPT 253 (271)
Q Consensus 210 ~~p~LyiYS~~D~li~~~~Ve~~~~~~r~~G~-~V~~~~f~~S~H 253 (271)
.+|.|+++++.|.++|.++|.+.-+..+++-. .-+.+.|+|-.|
T Consensus 164 k~Pilfl~ae~D~~~p~~~v~~~ee~lk~~~~~~~~v~~f~g~~H 208 (242)
T KOG3043|consen 164 KAPILFLFAELDEDVPPKDVKAWEEKLKENPAVGSQVKTFSGVGH 208 (242)
T ss_pred CCCEEEEeecccccCCHHHHHHHHHHHhcCcccceeEEEcCCccc
Confidence 58999999999999999999998887776421 134567999888
No 77
>PRK07581 hypothetical protein; Validated
Probab=79.25 E-value=2.6 Score=38.29 Aligned_cols=49 Identities=6% Similarity=-0.086 Sum_probs=37.0
Q ss_pred CCCCeEEEecCCCCcCChhHHHHHHHHHHHcCCcEEEEEcCC-CCCCCCcCCccccccccCc
Q 045563 209 PACPHLYLYSTGDKVIPYQSVELLIEEQRKTGRKVFSVILGH-LPTWITSGLSPADTYRSYI 269 (271)
Q Consensus 209 ~~~p~LyiYS~~D~li~~~~Ve~~~~~~r~~G~~V~~~~f~~-S~H~~~~~~~~v~H~r~~p 269 (271)
..+|.|+|+++.|.++|.+..+..++.. .+ .+.+.+++ +.| ..++-..|
T Consensus 274 I~~PtLvI~G~~D~~~p~~~~~~l~~~i--p~--a~l~~i~~~~GH--------~~~~~~~~ 323 (339)
T PRK07581 274 ITAKTFVMPISTDLYFPPEDCEAEAALI--PN--AELRPIESIWGH--------LAGFGQNP 323 (339)
T ss_pred CCCCEEEEEeCCCCCCCHHHHHHHHHhC--CC--CeEEEeCCCCCc--------cccccCcH
Confidence 4789999999999999998877664433 22 46677898 899 77765544
No 78
>TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase. This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid.
Probab=78.51 E-value=12 Score=32.65 Aligned_cols=40 Identities=23% Similarity=0.283 Sum_probs=30.5
Q ss_pred CCCCeEEEecCCCCcCChhHHHHHHHHHHHcCCcEEEEEcCCCCC
Q 045563 209 PACPHLYLYSTGDKVIPYQSVELLIEEQRKTGRKVFSVILGHLPT 253 (271)
Q Consensus 209 ~~~p~LyiYS~~D~li~~~~Ve~~~~~~r~~G~~V~~~~f~~S~H 253 (271)
..+|.|+|+++.|.++|.+..++..+... +.++ +.+++ .|
T Consensus 206 i~~P~lii~G~~D~~v~~~~~~~l~~~~~--~~~~--~~i~~-gH 245 (276)
T TIGR02240 206 IQQPTLVLAGDDDPIIPLINMRLLAWRIP--NAEL--HIIDD-GH 245 (276)
T ss_pred CCCCEEEEEeCCCCcCCHHHHHHHHHhCC--CCEE--EEEcC-CC
Confidence 36899999999999999999888876543 2333 44564 89
No 79
>TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase. This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes.
Probab=77.39 E-value=5.3 Score=36.64 Aligned_cols=45 Identities=20% Similarity=0.144 Sum_probs=35.7
Q ss_pred CCCCeEEEecCCCCcCChhHHHHHHHHHHHcCCcEEE-EEcCCCCC
Q 045563 209 PACPHLYLYSTGDKVIPYQSVELLIEEQRKTGRKVFS-VILGHLPT 253 (271)
Q Consensus 209 ~~~p~LyiYS~~D~li~~~~Ve~~~~~~r~~G~~V~~-~~f~~S~H 253 (271)
..+|.|+|.++.|.++|.+..++.++...+....|+. +.++++.|
T Consensus 287 I~~P~Lvi~G~~D~~~p~~~~~~~a~~i~~~~~~v~~~~i~~~~GH 332 (351)
T TIGR01392 287 IKAPFLVVSITSDWLFPPAESRELAKALPAAGLRVTYVEIESPYGH 332 (351)
T ss_pred CCCCEEEEEeCCccccCHHHHHHHHHHHhhcCCceEEEEeCCCCCc
Confidence 3689999999999999999999998887764444322 34678999
No 80
>PF05990 DUF900: Alpha/beta hydrolase of unknown function (DUF900); InterPro: IPR010297 This domain is associated with proteins of unknown function, which are hydrolase-like.
Probab=76.42 E-value=37 Score=29.50 Aligned_cols=117 Identities=10% Similarity=0.061 Sum_probs=63.0
Q ss_pred ccEEEEEccCCCchHHHHHHHHHHhhCCcceEEEe--ecccceeecccchhhhhhHHHHHHHHHHhhcccccCCCCceEE
Q 045563 3 AVTVVLLGWLGARRKHLRRYVEWYNSRGINAITFV--VEAKELLSFDLGRGVEKRIADLSNEIVSWVSHEEQDGKQRCLI 80 (271)
Q Consensus 3 ~~lVvl~gW~ga~~khl~KY~~~Y~~~g~~~l~~~--~~~~~~~~~~~g~~~~~~~~~~~~~i~~~l~~~~~~~~~~~il 80 (271)
.-||.+.||-..-+.-+.+++++....++...++. =|+..-+. ... ..+.......+.+.+++.+-.+......|-
T Consensus 19 ~vlvfVHGyn~~f~~a~~r~aql~~~~~~~~~~i~FsWPS~g~~~-~Y~-~d~~~a~~s~~~l~~~L~~L~~~~~~~~I~ 96 (233)
T PF05990_consen 19 EVLVFVHGYNNSFEDALRRAAQLAHDLGFPGVVILFSWPSDGSLL-GYF-YDRESARFSGPALARFLRDLARAPGIKRIH 96 (233)
T ss_pred eEEEEEeCCCCCHHHHHHHHHHHHHHhCCCceEEEEEcCCCCChh-hhh-hhhhhHHHHHHHHHHHHHHHHhccCCceEE
Confidence 45888999999999999999999999887763332 12221110 000 011111222222333322211111355666
Q ss_pred EEecccchHHHHHHHHHHhcCCC--CccCCeeEEEEeCCCCCCC
Q 045563 81 FHTFSNTGWFVCGSILASLQGRE--DLMQKIKGLIVDSGGAGAF 122 (271)
Q Consensus 81 ~H~FSnGG~~~~~~l~~~l~~~~--~~~~~i~g~I~DS~Pg~~~ 122 (271)
+=+=|+|+......|.....+.. +....+..+||- +|....
T Consensus 97 ilaHSMG~rv~~~aL~~l~~~~~~~~~~~~~~~viL~-ApDid~ 139 (233)
T PF05990_consen 97 ILAHSMGNRVLLEALRQLASEGERPDVKARFDNVILA-APDIDN 139 (233)
T ss_pred EEEeCchHHHHHHHHHHHHhcccchhhHhhhheEEEE-CCCCCH
Confidence 66668898665555544443322 333466777777 576653
No 81
>TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase. This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid.
Probab=73.70 E-value=5.1 Score=35.07 Aligned_cols=101 Identities=14% Similarity=0.059 Sum_probs=53.5
Q ss_pred ccEEEEEccCCCchHHHHHHHHHHhhCCcceEEEeecccceeecccchhhhhhHHHHHHHHHHhhcccccCCCCceEEEE
Q 045563 3 AVTVVLLGWLGARRKHLRRYVEWYNSRGINAITFVVEAKELLSFDLGRGVEKRIADLSNEIVSWVSHEEQDGKQRCLIFH 82 (271)
Q Consensus 3 ~~lVvl~gW~ga~~khl~KY~~~Y~~~g~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~l~~~~~~~~~~~il~H 82 (271)
+|||++.||.+... .-....+... ..++++.+-.+..-. +... ......+.+++.+.+++++.. ..++.+-
T Consensus 26 ~plvllHG~~~~~~-~w~~~~~~L~-~~~~vi~~Dl~G~G~-S~~~--~~~~~~~~~~~~~~~~i~~l~----~~~~~Lv 96 (276)
T TIGR02240 26 TPLLIFNGIGANLE-LVFPFIEALD-PDLEVIAFDVPGVGG-SSTP--RHPYRFPGLAKLAARMLDYLD----YGQVNAI 96 (276)
T ss_pred CcEEEEeCCCcchH-HHHHHHHHhc-cCceEEEECCCCCCC-CCCC--CCcCcHHHHHHHHHHHHHHhC----cCceEEE
Confidence 68999999987664 3344444332 356666665554211 1110 001124556666666554431 3467788
Q ss_pred ecccchHHHHHHHHHHhcCCCCccCCeeEEEEeCCCC
Q 045563 83 TFSNTGWFVCGSILASLQGREDLMQKIKGLIVDSGGA 119 (271)
Q Consensus 83 ~FSnGG~~~~~~l~~~l~~~~~~~~~i~g~I~DS~Pg 119 (271)
..|+||...+ .+... ++ ..++++|+=+++.
T Consensus 97 G~S~GG~va~-~~a~~---~p---~~v~~lvl~~~~~ 126 (276)
T TIGR02240 97 GVSWGGALAQ-QFAHD---YP---ERCKKLILAATAA 126 (276)
T ss_pred EECHHHHHHH-HHHHH---CH---HHhhheEEeccCC
Confidence 9999996544 33222 22 3566655544443
No 82
>KOG2551 consensus Phospholipase/carboxyhydrolase [Amino acid transport and metabolism]
Probab=73.57 E-value=4.7 Score=35.06 Aligned_cols=43 Identities=21% Similarity=0.364 Sum_probs=36.6
Q ss_pred cCCCCCCeEEEecCCCCcCChhHHHHHHHHHHHcCCcEEEEEcCCCCC
Q 045563 206 NNPPACPHLYLYSTGDKVIPYQSVELLIEEQRKTGRKVFSVILGHLPT 253 (271)
Q Consensus 206 ~~~~~~p~LyiYS~~D~li~~~~Ve~~~~~~r~~G~~V~~~~f~~S~H 253 (271)
..+..+|.|.||++.|.++|.+..+..++..++. .+.....+|
T Consensus 159 ~~~i~~PSLHi~G~~D~iv~~~~s~~L~~~~~~a-----~vl~HpggH 201 (230)
T KOG2551|consen 159 KRPLSTPSLHIFGETDTIVPSERSEQLAESFKDA-----TVLEHPGGH 201 (230)
T ss_pred ccCCCCCeeEEecccceeecchHHHHHHHhcCCC-----eEEecCCCc
Confidence 3466899999999999999999999999988775 556777777
No 83
>KOG2100 consensus Dipeptidyl aminopeptidase [Posttranslational modification, protein turnover, chaperones]
Probab=73.29 E-value=6.8 Score=40.29 Aligned_cols=46 Identities=17% Similarity=0.182 Sum_probs=42.1
Q ss_pred eEEEecCCCCcCChhHHHHHHHHHHHcCCcEEEEEcCCCCCCCCcC
Q 045563 213 HLYLYSTGDKVIPYQSVELLIEEQRKTGRKVFSVILGHLPTWITSG 258 (271)
Q Consensus 213 ~LyiYS~~D~li~~~~Ve~~~~~~r~~G~~V~~~~f~~S~H~~~~~ 258 (271)
-|+|.|++|+-|+.+.=-++++..+.+|.+.++..|+|+.|++...
T Consensus 685 ~LliHGt~DdnVh~q~s~~~~~aL~~~gv~~~~~vypde~H~is~~ 730 (755)
T KOG2100|consen 685 LLLIHGTEDDNVHFQQSAILIKALQNAGVPFRLLVYPDENHGISYV 730 (755)
T ss_pred EEEEEcCCcCCcCHHHHHHHHHHHHHCCCceEEEEeCCCCcccccc
Confidence 4999999999999999999999999999999999999999955543
No 84
>COG3243 PhaC Poly(3-hydroxyalkanoate) synthetase [Lipid metabolism]
Probab=72.93 E-value=6.8 Score=37.28 Aligned_cols=50 Identities=24% Similarity=0.202 Sum_probs=38.6
Q ss_pred CCCCeEEEecCCCCcCChhHHHHHHHHHHHcCCcEEEEEcCCCCCCCCcCCccccccccCcC
Q 045563 209 PACPHLYLYSTGDKVIPYQSVELLIEEQRKTGRKVFSVILGHLPTWITSGLSPADTYRSYII 270 (271)
Q Consensus 209 ~~~p~LyiYS~~D~li~~~~Ve~~~~~~r~~G~~V~~~~f~~S~H~~~~~~~~v~H~r~~p~ 270 (271)
..||.+.+++++|.+.||++|-.- ++..|-+|+.... +|+| .+-+-.||.
T Consensus 329 It~pvy~~a~~~DhI~P~~Sv~~g---~~l~~g~~~f~l~-~sGH--------Ia~vVN~p~ 378 (445)
T COG3243 329 ITCPVYNLAAEEDHIAPWSSVYLG---ARLLGGEVTFVLS-RSGH--------IAGVVNPPG 378 (445)
T ss_pred cccceEEEeecccccCCHHHHHHH---HHhcCCceEEEEe-cCce--------EEEEeCCcc
Confidence 489999999999999999988654 4555557766555 4999 877776663
No 85
>PLN03084 alpha/beta hydrolase fold protein; Provisional
Probab=72.55 E-value=8.3 Score=36.28 Aligned_cols=41 Identities=15% Similarity=0.089 Sum_probs=33.6
Q ss_pred CCCCCeEEEecCCCCcCChhHHHHHHHHHHHcCCcEEEEEcCCCCC
Q 045563 208 PPACPHLYLYSTGDKVIPYQSVELLIEEQRKTGRKVFSVILGHLPT 253 (271)
Q Consensus 208 ~~~~p~LyiYS~~D~li~~~~Ve~~~~~~r~~G~~V~~~~f~~S~H 253 (271)
...+|.|+|+++.|.+++.+..+++++.. +.+.+..+++.|
T Consensus 323 ~i~vPvLiI~G~~D~~v~~~~~~~~a~~~-----~a~l~vIp~aGH 363 (383)
T PLN03084 323 NWKTPITVCWGLRDRWLNYDGVEDFCKSS-----QHKLIELPMAGH 363 (383)
T ss_pred cCCCCEEEEeeCCCCCcCHHHHHHHHHhc-----CCeEEEECCCCC
Confidence 35789999999999999998888777642 346677999999
No 86
>COG0657 Aes Esterase/lipase [Lipid metabolism]
Probab=72.24 E-value=6.7 Score=35.24 Aligned_cols=42 Identities=19% Similarity=0.055 Sum_probs=38.8
Q ss_pred CCCeEEEecCCCCcCChhHHHHHHHHHHHcCCcEEEEEcCCCCC
Q 045563 210 ACPHLYLYSTGDKVIPYQSVELLIEEQRKTGRKVFSVILGHLPT 253 (271)
Q Consensus 210 ~~p~LyiYS~~D~li~~~~Ve~~~~~~r~~G~~V~~~~f~~S~H 253 (271)
-.|.+.+.++.|.+.+ +-+.+++..++.|..|+...|++..|
T Consensus 245 lPP~~i~~a~~D~l~~--~~~~~a~~L~~agv~~~~~~~~g~~H 286 (312)
T COG0657 245 LPPTLIQTAEFDPLRD--EGEAYAERLRAAGVPVELRVYPGMIH 286 (312)
T ss_pred CCCEEEEecCCCcchh--HHHHHHHHHHHcCCeEEEEEeCCcce
Confidence 3568889999999999 99999999999999999999999999
No 87
>PF00151 Lipase: Lipase; InterPro: IPR013818 Triglyceride lipases (3.1.1.3 from EC) are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. At least three tissue-specific isozymes exist in higher vertebrates, pancreatic, hepatic and gastric/lingual. These lipases are closely related to each other and to lipoprotein lipase (3.1.1.34 from EC), which hydrolyses triglycerides of chylomicrons and very low density lipoproteins (VLDL) []. The most conserved region in all these proteins is centred around a serine residue which has been shown [] to participate, with an histidine and an aspartic acid residue, in a charge relay system. Such a region is also present in lipases of prokaryotic origin and in lecithin-cholesterol acyltransferase (2.3.1.43 from EC) (LCAT) [], which catalyzes fatty acid transfer between phosphatidylcholine and cholesterol.; PDB: 1LPB_B 1LPA_B 1N8S_A 1GPL_A 1W52_X 2PVS_B 2OXE_B 1BU8_A 2PPL_A 1ETH_A ....
Probab=72.24 E-value=21 Score=32.92 Aligned_cols=94 Identities=12% Similarity=0.117 Sum_probs=51.3
Q ss_pred ccEEEEEccCCCc--hHHHHHHHHHHhh---CCcceEEEe-ecccceeecccchhhhhhHHHHHHHHHHhhcccc--cCC
Q 045563 3 AVTVVLLGWLGAR--RKHLRRYVEWYNS---RGINAITFV-VEAKELLSFDLGRGVEKRIADLSNEIVSWVSHEE--QDG 74 (271)
Q Consensus 3 ~~lVvl~gW~ga~--~khl~KY~~~Y~~---~g~~~l~~~-~~~~~~~~~~~g~~~~~~~~~~~~~i~~~l~~~~--~~~ 74 (271)
+..|++.||.+.. ..-+.+..+.|-+ ...+++++- ........ ....+....+...|.+.+..-. ..-
T Consensus 72 pt~iiiHGw~~~~~~~~~~~~~~~all~~~~~d~NVI~VDWs~~a~~~Y----~~a~~n~~~vg~~la~~l~~L~~~~g~ 147 (331)
T PF00151_consen 72 PTVIIIHGWTGSGSSESWIQDMIKALLQKDTGDYNVIVVDWSRGASNNY----PQAVANTRLVGRQLAKFLSFLINNFGV 147 (331)
T ss_dssp EEEEEE--TT-TT-TTTHHHHHHHHHHCC--S-EEEEEEE-HHHHSS-H----HHHHHHHHHHHHHHHHHHHHHHHHH--
T ss_pred CeEEEEcCcCCcccchhHHHHHHHHHHhhccCCceEEEEcchhhccccc----cchhhhHHHHHHHHHHHHHHHHhhcCC
Confidence 5678899999876 6788888886544 466666664 22221111 1122233444444433332211 012
Q ss_pred CCceEEEEecccchHHHHHHHHHHhcC
Q 045563 75 KQRCLIFHTFSNTGWFVCGSILASLQG 101 (271)
Q Consensus 75 ~~~~il~H~FSnGG~~~~~~l~~~l~~ 101 (271)
+...|.+=.||-|+ ...+..-..++.
T Consensus 148 ~~~~ihlIGhSLGA-HvaG~aG~~~~~ 173 (331)
T PF00151_consen 148 PPENIHLIGHSLGA-HVAGFAGKYLKG 173 (331)
T ss_dssp -GGGEEEEEETCHH-HHHHHHHHHTTT
T ss_pred ChhHEEEEeeccch-hhhhhhhhhccC
Confidence 46688999999998 788887777765
No 88
>PRK08775 homoserine O-acetyltransferase; Provisional
Probab=71.37 E-value=3.4 Score=37.77 Aligned_cols=43 Identities=16% Similarity=0.210 Sum_probs=33.3
Q ss_pred CCCCCeEEEecCCCCcCChhHHHHHHHHHHHcCCcEEEEEcCC-CCC
Q 045563 208 PPACPHLYLYSTGDKVIPYQSVELLIEEQRKTGRKVFSVILGH-LPT 253 (271)
Q Consensus 208 ~~~~p~LyiYS~~D~li~~~~Ve~~~~~~r~~G~~V~~~~f~~-S~H 253 (271)
...+|.|+|+++.|.++|.++.++.++.... +.+.+.+++ +.|
T Consensus 275 ~I~~PtLvi~G~~D~~~p~~~~~~~~~~i~p---~a~l~~i~~~aGH 318 (343)
T PRK08775 275 AIRVPTVVVAVEGDRLVPLADLVELAEGLGP---RGSLRVLRSPYGH 318 (343)
T ss_pred cCCCCeEEEEeCCCEeeCHHHHHHHHHHcCC---CCeEEEEeCCccH
Confidence 3478999999999999999988776554432 356677874 899
No 89
>PF05677 DUF818: Chlamydia CHLPS protein (DUF818); InterPro: IPR008536 This family of unknown function includes several Chlamydia CHLPS proteins and Legionella SidB proteins.
Probab=70.71 E-value=31 Score=32.17 Aligned_cols=94 Identities=18% Similarity=0.151 Sum_probs=60.6
Q ss_pred HHHHHhhCCcceEEEeecccceeecccchhhhhhHHHHHHHHHHhhcccccCCCCceEEEEecccchHHHHHHHHHHhcC
Q 045563 22 YVEWYNSRGINAITFVVEAKELLSFDLGRGVEKRIADLSNEIVSWVSHEEQDGKQRCLIFHTFSNTGWFVCGSILASLQG 101 (271)
Q Consensus 22 Y~~~Y~~~g~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~l~~~~~~~~~~~il~H~FSnGG~~~~~~l~~~l~~ 101 (271)
-.+.+.+.+-|++++..|.-- .+.|......+....+.++++|.|+...-....|+.+.-|-||+.....+-+...
T Consensus 163 ~~~~ak~~~aNvl~fNYpGVg---~S~G~~s~~dLv~~~~a~v~yL~d~~~G~ka~~Ii~yG~SLGG~Vqa~AL~~~~~- 238 (365)
T PF05677_consen 163 IQRFAKELGANVLVFNYPGVG---SSTGPPSRKDLVKDYQACVRYLRDEEQGPKAKNIILYGHSLGGGVQAEALKKEVL- 238 (365)
T ss_pred HHHHHHHcCCcEEEECCCccc---cCCCCCCHHHHHHHHHHHHHHHHhcccCCChheEEEeeccccHHHHHHHHHhccc-
Confidence 456677899999999877631 1233333456777788888898775433357899999999999866543322211
Q ss_pred CCCccCCee-EEEEeCCCCCC
Q 045563 102 REDLMQKIK-GLIVDSGGAGA 121 (271)
Q Consensus 102 ~~~~~~~i~-g~I~DS~Pg~~ 121 (271)
+-.+.++ .+|-|.+|...
T Consensus 239 --~~~dgi~~~~ikDRsfssl 257 (365)
T PF05677_consen 239 --KGSDGIRWFLIKDRSFSSL 257 (365)
T ss_pred --ccCCCeeEEEEecCCcchH
Confidence 1123344 56778887754
No 90
>COG4782 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=68.10 E-value=61 Score=30.39 Aligned_cols=111 Identities=15% Similarity=0.235 Sum_probs=68.1
Q ss_pred EEEEEccCCCchHHHHHHHHHHhhCCcceEEEe--eccc-ceeecccchhhhhhHHHHHHHHHHhhcccccCCCCceEEE
Q 045563 5 TVVLLGWLGARRKHLRRYVEWYNSRGINAITFV--VEAK-ELLSFDLGRGVEKRIADLSNEIVSWVSHEEQDGKQRCLIF 81 (271)
Q Consensus 5 lVvl~gW~ga~~khl~KY~~~Y~~~g~~~l~~~--~~~~-~~~~~~~g~~~~~~~~~~~~~i~~~l~~~~~~~~~~~il~ 81 (271)
+|-+.|....=+.-+.+.+++-++.|.....+. =|+. .++--..-..-...-.+.++.++.+|.+..+ ...|.+
T Consensus 119 lvFvHGfNntf~dav~R~aqI~~d~g~~~~pVvFSWPS~g~l~~Yn~DreS~~~Sr~aLe~~lr~La~~~~---~~~I~i 195 (377)
T COG4782 119 LVFVHGFNNTFEDAVYRTAQIVHDSGNDGVPVVFSWPSRGSLLGYNYDRESTNYSRPALERLLRYLATDKP---VKRIYL 195 (377)
T ss_pred EEEEcccCCchhHHHHHHHHHHhhcCCCcceEEEEcCCCCeeeecccchhhhhhhHHHHHHHHHHHHhCCC---CceEEE
Confidence 566778888888888999999999888885554 2222 2221111111223346777777777766532 567777
Q ss_pred EecccchHHHHHHHHHHhcC--CCCccCCeeEEEEeCCCCC
Q 045563 82 HTFSNTGWFVCGSILASLQG--REDLMQKIKGLIVDSGGAG 120 (271)
Q Consensus 82 H~FSnGG~~~~~~l~~~l~~--~~~~~~~i~g~I~DS~Pg~ 120 (271)
=+=|+|.+. ..+.+++|.- ..++...|+-+|+= +|..
T Consensus 196 lAHSMGtwl-~~e~LrQLai~~~~~l~~ki~nViLA-aPDi 234 (377)
T COG4782 196 LAHSMGTWL-LMEALRQLAIRADRPLPAKIKNVILA-APDI 234 (377)
T ss_pred EEecchHHH-HHHHHHHHhccCCcchhhhhhheEee-CCCC
Confidence 777899964 4555565553 23365566677776 4443
No 91
>PRK08775 homoserine O-acetyltransferase; Provisional
Probab=67.93 E-value=14 Score=33.61 Aligned_cols=102 Identities=18% Similarity=0.248 Sum_probs=52.9
Q ss_pred CccEEEEEccCCCchHHHHHHHH-----HHh----------hCCcceEEEeecccceeecccchhhhhhHHHHHHHHHHh
Q 045563 2 TAVTVVLLGWLGARRKHLRRYVE-----WYN----------SRGINAITFVVEAKELLSFDLGRGVEKRIADLSNEIVSW 66 (271)
Q Consensus 2 ~~~lVvl~gW~ga~~khl~KY~~-----~Y~----------~~g~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~ 66 (271)
.+|+|+|.||+++.. +.++|.+ +|. ..++.++.+-.+... -.+... -.+...++.+.++
T Consensus 57 ~~p~vll~g~~~~~~-~~~~~~~~~~~~~w~~~v~~~~~L~~~~~~Vi~~Dl~G~g-~s~~~~----~~~~~~a~dl~~l 130 (343)
T PRK08775 57 GAPVVFVAGGISAHR-HVAATATFPEKGWWEGLVGSGRALDPARFRLLAFDFIGAD-GSLDVP----IDTADQADAIALL 130 (343)
T ss_pred CCCEEEEecCCCccc-ccccccCCCCCCcchhccCCCCccCccccEEEEEeCCCCC-CCCCCC----CCHHHHHHHHHHH
Confidence 358999999998764 4344333 332 124555555544321 011110 1234566777776
Q ss_pred hcccccCCCCceEEEEecccchHHHHHHHHHHhcCCCCccCCeeEEE-EeCCCC
Q 045563 67 VSHEEQDGKQRCLIFHTFSNTGWFVCGSILASLQGREDLMQKIKGLI-VDSGGA 119 (271)
Q Consensus 67 l~~~~~~~~~~~il~H~FSnGG~~~~~~l~~~l~~~~~~~~~i~g~I-~DS~Pg 119 (271)
+.+.. -.+.+.+=.+|+||...+ +++.. + ..+++++| +|+++.
T Consensus 131 l~~l~---l~~~~~lvG~SmGG~vA~-~~A~~---~---P~~V~~LvLi~s~~~ 174 (343)
T PRK08775 131 LDALG---IARLHAFVGYSYGALVGL-QFASR---H---PARVRTLVVVSGAHR 174 (343)
T ss_pred HHHcC---CCcceEEEEECHHHHHHH-HHHHH---C---hHhhheEEEECcccc
Confidence 65432 133456889999996443 33222 2 23455555 555544
No 92
>COG0596 MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=67.62 E-value=8.1 Score=31.49 Aligned_cols=101 Identities=11% Similarity=0.110 Sum_probs=53.1
Q ss_pred cEEEEEccCCCchHHHHHHHHHHhhCC-cceEEEeecccceeecccchhhhhhHHHHHHHHHHhhcccccCCCCceEEEE
Q 045563 4 VTVVLLGWLGARRKHLRRYVEWYNSRG-INAITFVVEAKELLSFDLGRGVEKRIADLSNEIVSWVSHEEQDGKQRCLIFH 82 (271)
Q Consensus 4 ~lVvl~gW~ga~~khl~KY~~~Y~~~g-~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~l~~~~~~~~~~~il~H 82 (271)
+++++-||.++...+...+........ ++++.+..+. +-.....+ ......+..+..++.... ..++++=
T Consensus 23 ~i~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~g-~g~s~~~~----~~~~~~~~~~~~~~~~~~----~~~~~l~ 93 (282)
T COG0596 23 PLVLLHGFPGSSSVWRPVFKVLPALAARYRVIAPDLRG-HGRSDPAG----YSLSAYADDLAALLDALG----LEKVVLV 93 (282)
T ss_pred eEEEeCCCCCchhhhHHHHHHhhccccceEEEEecccC-CCCCCccc----ccHHHHHHHHHHHHHHhC----CCceEEE
Confidence 799999999888877664444444322 5665555442 22111000 011122344444443221 2237777
Q ss_pred ecccchHHHHHHHHHHhcCCCCccCCeeEEEEeCCCCC
Q 045563 83 TFSNTGWFVCGSILASLQGREDLMQKIKGLIVDSGGAG 120 (271)
Q Consensus 83 ~FSnGG~~~~~~l~~~l~~~~~~~~~i~g~I~DS~Pg~ 120 (271)
..|.||...+ .+... +. ..++++|+++.+..
T Consensus 94 G~S~Gg~~~~-~~~~~---~p---~~~~~~v~~~~~~~ 124 (282)
T COG0596 94 GHSMGGAVAL-ALALR---HP---DRVRGLVLIGPAPP 124 (282)
T ss_pred EecccHHHHH-HHHHh---cc---hhhheeeEecCCCC
Confidence 8888875433 22111 11 27889999987754
No 93
>PRK06489 hypothetical protein; Provisional
Probab=66.96 E-value=24 Score=32.39 Aligned_cols=41 Identities=17% Similarity=0.133 Sum_probs=29.9
Q ss_pred CCCCeEEEecCCCCcCChhHH--HHHHHHHHHcCCcEEEEEcCCC----CC
Q 045563 209 PACPHLYLYSTGDKVIPYQSV--ELLIEEQRKTGRKVFSVILGHL----PT 253 (271)
Q Consensus 209 ~~~p~LyiYS~~D~li~~~~V--e~~~~~~r~~G~~V~~~~f~~S----~H 253 (271)
..+|.|+|.++.|.++|.+.. ++.++... +.+.+.++++ .|
T Consensus 291 I~~PvLvI~G~~D~~~p~~~~~~~~la~~ip----~a~l~~i~~a~~~~GH 337 (360)
T PRK06489 291 IKAPVLAINSADDERNPPETGVMEAALKRVK----HGRLVLIPASPETRGH 337 (360)
T ss_pred CCCCEEEEecCCCcccChhhHHHHHHHHhCc----CCeEEEECCCCCCCCc
Confidence 378999999999999998764 44433221 3466778986 88
No 94
>PF06821 Ser_hydrolase: Serine hydrolase; InterPro: IPR010662 This family contains a number of hypothetical bacterial proteins of unknown function, which may be cytosolic. The Crystal Structure Of The Yden Gene Product Swiss:P96671 from B. Subtilis has been solved. The structure shows an alpha-beta hydrolase fold suggesting an enzymatic function for these proteins [].; GO: 0016787 hydrolase activity; PDB: 3BDV_B 2QS9_A 1UXO_A.
Probab=66.81 E-value=5.5 Score=33.01 Aligned_cols=92 Identities=12% Similarity=0.165 Sum_probs=46.2
Q ss_pred EEEEEccCCCchHHHHHHHHHHhhCCcceEEEeecccceeecccchhhhhhHHHHHHHHHHhhcccccCCCCceEEEEec
Q 045563 5 TVVLLGWLGARRKHLRRYVEWYNSRGINAITFVVEAKELLSFDLGRGVEKRIADLSNEIVSWVSHEEQDGKQRCLIFHTF 84 (271)
Q Consensus 5 lVvl~gW~ga~~khl~KY~~~Y~~~g~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~l~~~~~~~~~~~il~H~F 84 (271)
++|+-||.|+.+.|=..+ +++...+...+..+.. -.| .+..-...+.+.+... +++.-++-|++
T Consensus 1 v~IvhG~~~s~~~HW~~w---l~~~l~~~~~V~~~~~--~~P--------~~~~W~~~l~~~i~~~---~~~~ilVaHSL 64 (171)
T PF06821_consen 1 VLIVHGYGGSPPDHWQPW---LERQLENSVRVEQPDW--DNP--------DLDEWVQALDQAIDAI---DEPTILVAHSL 64 (171)
T ss_dssp EEEE--TTSSTTTSTHHH---HHHHHTTSEEEEEC----TS----------HHHHHHHHHHCCHC----TTTEEEEEETH
T ss_pred CEEeCCCCCCCccHHHHH---HHHhCCCCeEEecccc--CCC--------CHHHHHHHHHHHHhhc---CCCeEEEEeCH
Confidence 589999999999994443 3344444444433322 112 2234455555555432 12345666765
Q ss_pred ccchHHHHHHHHHHhcCCCCccCCeeEEEEeCCCCC
Q 045563 85 SNTGWFVCGSILASLQGREDLMQKIKGLIVDSGGAG 120 (271)
Q Consensus 85 SnGG~~~~~~l~~~l~~~~~~~~~i~g~I~DS~Pg~ 120 (271)
||.+..+.+. . ....+|+|+++=|.|..
T Consensus 65 ---Gc~~~l~~l~--~---~~~~~v~g~lLVAp~~~ 92 (171)
T PF06821_consen 65 ---GCLTALRWLA--E---QSQKKVAGALLVAPFDP 92 (171)
T ss_dssp ---HHHHHHHHHH--H---TCCSSEEEEEEES--SC
T ss_pred ---HHHHHHHHHh--h---cccccccEEEEEcCCCc
Confidence 4444434332 1 23358999999888865
No 95
>TIGR03230 lipo_lipase lipoprotein lipase. Members of this protein family are lipoprotein lipase (EC 3.1.1.34), a eukaryotic triacylglycerol lipase active in plasma and similar to pancreatic and hepatic triacylglycerol lipases (EC 3.1.1.3). It is also called clearing factor. It cleaves chylomicron and VLDL triacylglycerols; it also has phospholipase A-1 activity.
Probab=66.70 E-value=75 Score=30.61 Aligned_cols=89 Identities=16% Similarity=0.173 Sum_probs=44.8
Q ss_pred CccEEEEEccCCCc--hHHHHHHHHH-Hhh-CCcceEEEeeccc-ceeecccchhhhhhHHHHHHHH---HHhhcccccC
Q 045563 2 TAVTVVLLGWLGAR--RKHLRRYVEW-YNS-RGINAITFVVEAK-ELLSFDLGRGVEKRIADLSNEI---VSWVSHEEQD 73 (271)
Q Consensus 2 ~~~lVvl~gW~ga~--~khl~KY~~~-Y~~-~g~~~l~~~~~~~-~~~~~~~g~~~~~~~~~~~~~i---~~~l~~~~~~ 73 (271)
.+++|+|.||++.. ..-+.+-.+. +.. ..++++++--+.. ....+.. ......++..+ ++.|.+...
T Consensus 41 ~ptvIlIHG~~~s~~~~~w~~~l~~al~~~~~d~nVI~VDw~g~g~s~y~~a----~~~t~~vg~~la~lI~~L~~~~g- 115 (442)
T TIGR03230 41 TKTFIVIHGWTVTGMFESWVPKLVAALYEREPSANVIVVDWLSRAQQHYPTS----AAYTKLVGKDVAKFVNWMQEEFN- 115 (442)
T ss_pred CCeEEEECCCCcCCcchhhHHHHHHHHHhccCCCEEEEEECCCcCCCCCccc----cccHHHHHHHHHHHHHHHHHhhC-
Confidence 36899999999753 3344455554 332 2477777764432 1111110 01112222222 222322111
Q ss_pred CCCceEEEEecccchHHHHHHHH
Q 045563 74 GKQRCLIFHTFSNTGWFVCGSIL 96 (271)
Q Consensus 74 ~~~~~il~H~FSnGG~~~~~~l~ 96 (271)
.....+.+=.+|.||- ..+.+.
T Consensus 116 l~l~~VhLIGHSLGAh-IAg~ag 137 (442)
T TIGR03230 116 YPWDNVHLLGYSLGAH-VAGIAG 137 (442)
T ss_pred CCCCcEEEEEECHHHH-HHHHHH
Confidence 1356899999999994 444443
No 96
>PF05057 DUF676: Putative serine esterase (DUF676); InterPro: IPR007751 This domain, whose function is unknown, is found within a group of putative lipases.
Probab=64.88 E-value=65 Score=27.47 Aligned_cols=91 Identities=19% Similarity=0.125 Sum_probs=48.9
Q ss_pred cEEEEEccCCCchHHHHHHHHHHhh---CCcceEEEe-ecccceeecccchhhhhhHHHHHHHHHHhhcccccCCCCceE
Q 045563 4 VTVVLLGWLGARRKHLRRYVEWYNS---RGINAITFV-VEAKELLSFDLGRGVEKRIADLSNEIVSWVSHEEQDGKQRCL 79 (271)
Q Consensus 4 ~lVvl~gW~ga~~khl~KY~~~Y~~---~g~~~l~~~-~~~~~~~~~~~g~~~~~~~~~~~~~i~~~l~~~~~~~~~~~i 79 (271)
-+|++.|..|. +.++....+.... ..++..++. .......... .......+.++++|.+.+++.+. ...+|
T Consensus 6 LvV~vHGL~G~-~~d~~~~~~~l~~~~~~~~~~~i~~~~~~~n~~~T~--~gI~~~g~rL~~eI~~~~~~~~~--~~~~I 80 (217)
T PF05057_consen 6 LVVFVHGLWGN-PADMRYLKNHLEKIPEDLPNARIVVLGYSNNEFKTF--DGIDVCGERLAEEILEHIKDYES--KIRKI 80 (217)
T ss_pred EEEEeCCCCCC-HHHHHHHHHHHHHhhhhcchhhhhhhcccccccccc--hhhHHHHHHHHHHHHHhcccccc--ccccc
Confidence 36777788876 5665544444444 455553332 2211111111 11233445667777766655432 24699
Q ss_pred EEEecccchHHHHHHHHHHh
Q 045563 80 IFHTFSNTGWFVCGSILASL 99 (271)
Q Consensus 80 l~H~FSnGG~~~~~~l~~~l 99 (271)
.|=+-|.||...-..+....
T Consensus 81 sfIgHSLGGli~r~al~~~~ 100 (217)
T PF05057_consen 81 SFIGHSLGGLIARYALGLLH 100 (217)
T ss_pred eEEEecccHHHHHHHHHHhh
Confidence 99999999976554444333
No 97
>KOG4667 consensus Predicted esterase [Lipid transport and metabolism]
Probab=64.02 E-value=9 Score=33.47 Aligned_cols=51 Identities=12% Similarity=0.112 Sum_probs=40.1
Q ss_pred HHHHhhcCCCCCCeEEEecCCCCcCChhHHHHHHHHHHHcCCcEEEEEcCCCCCC
Q 045563 200 VVSAVTNNPPACPHLYLYSTGDKVIPYQSVELLIEEQRKTGRKVFSVILGHLPTW 254 (271)
Q Consensus 200 ~~~~~~~~~~~~p~LyiYS~~D~li~~~~Ve~~~~~~r~~G~~V~~~~f~~S~H~ 254 (271)
......+.+..||.|-.|+.+|.+||-++-.+||+.... =..+.-|+..|-
T Consensus 189 ~h~aclkId~~C~VLTvhGs~D~IVPve~AkefAk~i~n----H~L~iIEgADHn 239 (269)
T KOG4667|consen 189 IHEACLKIDKQCRVLTVHGSEDEIVPVEDAKEFAKIIPN----HKLEIIEGADHN 239 (269)
T ss_pred hhhhhcCcCccCceEEEeccCCceeechhHHHHHHhccC----CceEEecCCCcC
Confidence 344455577799999999999999999999999987655 234667888883
No 98
>PF02089 Palm_thioest: Palmitoyl protein thioesterase; InterPro: IPR002472 Neuronal ceroid lipofuscinoses (NCL) represent a group of encephalopathies that occur in 1 in 12,500 children. Mutations in the palmitoyl protein thioesterase gene causing infantile neuronal ceroid lipofuscinosis []. The most common mutation results in intracellular accumulation of the polypeptide and undetectable enzyme activity in the brain. Direct sequencing of cDNAs derived from brain RNA of INCL patients has shown a mis-sense transversion of A to T at nucleotide position 364, which results in substitution of Trp for Arg at position 122 in the protein - Arg 122 is immediately adjacent to a lipase consensus sequence that contains the putative active site Ser of PPT. The occurrence of this and two other independent mutations in the PPT gene strongly suggests that defects in this gene cause INCL.; GO: 0008474 palmitoyl-(protein) hydrolase activity, 0006464 protein modification process; PDB: 3GRO_B 1PJA_A 1EXW_A 1EH5_A 1EI9_A.
Probab=61.59 E-value=58 Score=29.40 Aligned_cols=106 Identities=12% Similarity=0.140 Sum_probs=46.9
Q ss_pred CCccEEEEEccCCC--chHHHHHHHHHHhhCCcceEEEeecccceeec----c-cchhhhhhHHHHHHHHHHhhcccccC
Q 045563 1 ETAVTVVLLGWLGA--RRKHLRRYVEWYNSRGINAITFVVEAKELLSF----D-LGRGVEKRIADLSNEIVSWVSHEEQD 73 (271)
Q Consensus 1 ~~~~lVvl~gW~ga--~~khl~KY~~~Y~~~g~~~l~~~~~~~~~~~~----~-~g~~~~~~~~~~~~~i~~~l~~~~~~ 73 (271)
.|.|+||+.|=.+. .+.-+....++-++..|.+-+......+-... + ++ .+...++.+.+.| +..++
T Consensus 4 ~~~PvViwHGmGD~~~~~~~m~~i~~~i~~~~PG~yV~si~ig~~~~~D~~~s~f~-~v~~Qv~~vc~~l----~~~p~- 77 (279)
T PF02089_consen 4 SPLPVVIWHGMGDSCCNPSSMGSIKELIEEQHPGTYVHSIEIGNDPSEDVENSFFG-NVNDQVEQVCEQL----ANDPE- 77 (279)
T ss_dssp SS--EEEE--TT--S--TTTHHHHHHHHHHHSTT--EEE--SSSSHHHHHHHHHHS-HHHHHHHHHHHHH----HH-GG-
T ss_pred CCCcEEEEEcCccccCChhHHHHHHHHHHHhCCCceEEEEEECCCcchhhhhhHHH-HHHHHHHHHHHHH----hhChh-
Confidence 36799999997653 33345555555667789887777665432110 0 11 1222333333333 22221
Q ss_pred CCCceEEEEecccchHHHHHHHHHHhcCCCCccCCeeEEEEeCCCC
Q 045563 74 GKQRCLIFHTFSNTGWFVCGSILASLQGREDLMQKIKGLIVDSGGA 119 (271)
Q Consensus 74 ~~~~~il~H~FSnGG~~~~~~l~~~l~~~~~~~~~i~g~I~DS~Pg 119 (271)
-...+-.=.||=||- .+..+++.+. ..+++-+|==++|-
T Consensus 78 -L~~G~~~IGfSQGgl-~lRa~vq~c~-----~~~V~nlISlggph 116 (279)
T PF02089_consen 78 -LANGFNAIGFSQGGL-FLRAYVQRCN-----DPPVHNLISLGGPH 116 (279)
T ss_dssp -GTT-EEEEEETCHHH-HHHHHHHH-T-----SS-EEEEEEES--T
T ss_pred -hhcceeeeeeccccH-HHHHHHHHCC-----CCCceeEEEecCcc
Confidence 135788889999994 5555555542 13566666444443
No 99
>COG4099 Predicted peptidase [General function prediction only]
Probab=60.89 E-value=46 Score=30.57 Aligned_cols=85 Identities=11% Similarity=0.024 Sum_probs=45.8
Q ss_pred cEEEEEccCCCchHHHHHHHHHHhhCCcce------EE-Eeecc-cceeecccchhhhhhHHHHHHHHHHhhcccccCCC
Q 045563 4 VTVVLLGWLGARRKHLRRYVEWYNSRGINA------IT-FVVEA-KELLSFDLGRGVEKRIADLSNEIVSWVSHEEQDGK 75 (271)
Q Consensus 4 ~lVvl~gW~ga~~khl~KY~~~Y~~~g~~~------l~-~~~~~-~~~~~~~~g~~~~~~~~~~~~~i~~~l~~~~~~~~ 75 (271)
||||.+= ||-..-=..|...|..+|--+ -| +++|- ..+|.-+ ..+...++...++-|++.+.++-+ -+
T Consensus 192 PLvlfLH--gagq~g~dn~~~l~sg~gaiawa~pedqcfVlAPQy~~if~d~-e~~t~~~l~~~idli~~vlas~yn-ID 267 (387)
T COG4099 192 PLVLFLH--GAGQGGSDNDKVLSSGIGAIAWAGPEDQCFVLAPQYNPIFADS-EEKTLLYLIEKIDLILEVLASTYN-ID 267 (387)
T ss_pred cEEEEEe--cCCCCCchhhhhhhcCccceeeecccCceEEEccccccccccc-ccccchhHHHHHHHHHHHHhhccC-cc
Confidence 6777665 444444456667777555433 11 22222 2222111 112234455556666655655544 35
Q ss_pred CceEEEEecccchHHHH
Q 045563 76 QRCLIFHTFSNTGWFVC 92 (271)
Q Consensus 76 ~~~il~H~FSnGG~~~~ 92 (271)
..+|++-.+|.||...+
T Consensus 268 ~sRIYviGlSrG~~gt~ 284 (387)
T COG4099 268 RSRIYVIGLSRGGFGTW 284 (387)
T ss_pred cceEEEEeecCcchhhH
Confidence 78999999999996544
No 100
>PLN00021 chlorophyllase
Probab=58.37 E-value=77 Score=28.87 Aligned_cols=82 Identities=18% Similarity=0.215 Sum_probs=42.2
Q ss_pred ccEEEEEccCCCchHHHHHHHHHHhhCCcceEEEeecccceeecccchhhhhhHHHHHHHHHHhhccc-------ccCCC
Q 045563 3 AVTVVLLGWLGARRKHLRRYVEWYNSRGINAITFVVEAKELLSFDLGRGVEKRIADLSNEIVSWVSHE-------EQDGK 75 (271)
Q Consensus 3 ~~lVvl~gW~ga~~khl~KY~~~Y~~~g~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~l~~~-------~~~~~ 75 (271)
+.+|++.||++.... .....+...+.|+.++....+. +.+.... ..+.. +.++.+++.+. ....+
T Consensus 53 PvVv~lHG~~~~~~~-y~~l~~~Las~G~~VvapD~~g---~~~~~~~---~~i~d-~~~~~~~l~~~l~~~l~~~~~~d 124 (313)
T PLN00021 53 PVLLFLHGYLLYNSF-YSQLLQHIASHGFIVVAPQLYT---LAGPDGT---DEIKD-AAAVINWLSSGLAAVLPEGVRPD 124 (313)
T ss_pred CEEEEECCCCCCccc-HHHHHHHHHhCCCEEEEecCCC---cCCCCch---hhHHH-HHHHHHHHHhhhhhhcccccccC
Confidence 456777799876543 3445555677888776654332 1111111 11111 22223333221 00123
Q ss_pred CceEEEEecccchHHHH
Q 045563 76 QRCLIFHTFSNTGWFVC 92 (271)
Q Consensus 76 ~~~il~H~FSnGG~~~~ 92 (271)
..++.+-..|+||...+
T Consensus 125 ~~~v~l~GHS~GG~iA~ 141 (313)
T PLN00021 125 LSKLALAGHSRGGKTAF 141 (313)
T ss_pred hhheEEEEECcchHHHH
Confidence 46899999999996544
No 101
>COG3040 Blc Bacterial lipocalin [Cell envelope biogenesis, outer membrane]
Probab=57.67 E-value=21 Score=29.73 Aligned_cols=40 Identities=18% Similarity=0.281 Sum_probs=33.6
Q ss_pred CCCeEEEecCCCCcCChhHHHHHHHHHHHcCCcEEEEEcCC
Q 045563 210 ACPHLYLYSTGDKVIPYQSVELLIEEQRKTGRKVFSVILGH 250 (271)
Q Consensus 210 ~~p~LyiYS~~D~li~~~~Ve~~~~~~r~~G~~V~~~~f~~ 250 (271)
...-|+|||+.=++ .-+..+++.+++|++|++|....|..
T Consensus 131 dr~ylWlLsRtP~~-s~~~~~~ml~~ak~~Gfdv~~li~~~ 170 (174)
T COG3040 131 DREYLWLLSRTPTL-SQETLKRMLEIAKRRGFDVSKLIFVQ 170 (174)
T ss_pred CcceEEEEecCCCC-CHHHHHHHHHHHHHcCCCcceeEecC
Confidence 46789999998554 45689999999999999999998863
No 102
>PF11144 DUF2920: Protein of unknown function (DUF2920); InterPro: IPR022605 This bacterial family of proteins has no known function.
Probab=56.67 E-value=20 Score=34.03 Aligned_cols=37 Identities=19% Similarity=0.132 Sum_probs=33.5
Q ss_pred CeEEEecCCCCcCChhHHHHHHHHHHHcCCcEEEEEc
Q 045563 212 PHLYLYSTGDKVIPYQSVELLIEEQRKTGRKVFSVIL 248 (271)
Q Consensus 212 p~LyiYS~~D~li~~~~Ve~~~~~~r~~G~~V~~~~f 248 (271)
--+-.+|..|+++|.++=+++++..+++|++|+....
T Consensus 295 ~yvsYHs~~D~~~p~~~K~~l~~~l~~lgfda~l~lI 331 (403)
T PF11144_consen 295 IYVSYHSIKDDLAPAEDKEELYEILKNLGFDATLHLI 331 (403)
T ss_pred EEEEEeccCCCCCCHHHHHHHHHHHHHcCCCeEEEEe
Confidence 3445889999999999999999999999999998887
No 103
>PF00975 Thioesterase: Thioesterase domain; InterPro: IPR001031 Thioesterase domains often occur integrated in or associated with peptide synthetases which are involved in the non-ribosomal synthesis of peptide antibiotics []. Thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates.; GO: 0016788 hydrolase activity, acting on ester bonds, 0009058 biosynthetic process; PDB: 2RON_A 2K2Q_B 3LCR_B 2HFJ_B 1MNQ_A 1MN6_B 1MNA_B 2HFK_B 2H7Y_B 2H7X_A ....
Probab=56.59 E-value=68 Score=26.79 Aligned_cols=59 Identities=12% Similarity=0.190 Sum_probs=36.4
Q ss_pred hHHHHHHHHHHhhcccccCCCCceEEEEecccchHHHHHHHHHHhcCCCCccCCeeEEEEeCCCC
Q 045563 55 RIADLSNEIVSWVSHEEQDGKQRCLIFHTFSNTGWFVCGSILASLQGREDLMQKIKGLIVDSGGA 119 (271)
Q Consensus 55 ~~~~~~~~i~~~l~~~~~~~~~~~il~H~FSnGG~~~~~~l~~~l~~~~~~~~~i~g~I~DS~Pg 119 (271)
.+..++....+.+.... +..|+++=..|.||. ..-.+...|.+.+. ..-.-+++|+.|-
T Consensus 47 si~~la~~y~~~I~~~~---~~gp~~L~G~S~Gg~-lA~E~A~~Le~~G~--~v~~l~liD~~~p 105 (229)
T PF00975_consen 47 SIEELASRYAEAIRARQ---PEGPYVLAGWSFGGI-LAFEMARQLEEAGE--EVSRLILIDSPPP 105 (229)
T ss_dssp SHHHHHHHHHHHHHHHT---SSSSEEEEEETHHHH-HHHHHHHHHHHTT---SESEEEEESCSST
T ss_pred CHHHHHHHHHHHhhhhC---CCCCeeehccCccHH-HHHHHHHHHHHhhh--ccCceEEecCCCC
Confidence 34556666555554432 244999999999995 55577777765432 1223568998644
No 104
>TIGR03056 bchO_mg_che_rel putative magnesium chelatase accessory protein. Members of this family belong to the alpha/beta fold family hydrolases (PFAM model pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity.
Probab=53.73 E-value=1.1e+02 Score=26.00 Aligned_cols=82 Identities=7% Similarity=0.018 Sum_probs=41.8
Q ss_pred ccEEEEEccCCCchHHHHHHHHHHhhCCcceEEEeecccceeecccchhhhhhHHHHHHHHHHhhcccccCCCCceEEEE
Q 045563 3 AVTVVLLGWLGARRKHLRRYVEWYNSRGINAITFVVEAKELLSFDLGRGVEKRIADLSNEIVSWVSHEEQDGKQRCLIFH 82 (271)
Q Consensus 3 ~~lVvl~gW~ga~~khl~KY~~~Y~~~g~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~l~~~~~~~~~~~il~H 82 (271)
++||++.||.+... .-.+..+... .+++++.+..+..-.-..... ..-.+..+++.+.++++.. ...++++-
T Consensus 29 ~~vv~~hG~~~~~~-~~~~~~~~l~-~~~~vi~~D~~G~G~S~~~~~--~~~~~~~~~~~l~~~i~~~----~~~~~~lv 100 (278)
T TIGR03056 29 PLLLLLHGTGASTH-SWRDLMPPLA-RSFRVVAPDLPGHGFTRAPFR--FRFTLPSMAEDLSALCAAE----GLSPDGVI 100 (278)
T ss_pred CeEEEEcCCCCCHH-HHHHHHHHHh-hCcEEEeecCCCCCCCCCccc--cCCCHHHHHHHHHHHHHHc----CCCCceEE
Confidence 46777777765443 3344444333 356666665443211000000 0113455666666665432 13467788
Q ss_pred ecccchHHHH
Q 045563 83 TFSNTGWFVC 92 (271)
Q Consensus 83 ~FSnGG~~~~ 92 (271)
.+|.||...+
T Consensus 101 G~S~Gg~~a~ 110 (278)
T TIGR03056 101 GHSAGAAIAL 110 (278)
T ss_pred EECccHHHHH
Confidence 9999996543
No 105
>KOG1454 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=53.41 E-value=23 Score=32.49 Aligned_cols=44 Identities=18% Similarity=0.294 Sum_probs=35.0
Q ss_pred CCCeEEEecCCCCcCChhHHHHHHHHHHHcCCcEEEEEcCCCCCCCCcCCcccccc
Q 045563 210 ACPHLYLYSTGDKVIPYQSVELLIEEQRKTGRKVFSVILGHLPTWITSGLSPADTY 265 (271)
Q Consensus 210 ~~p~LyiYS~~D~li~~~~Ve~~~~~~r~~G~~V~~~~f~~S~H~~~~~~~~v~H~ 265 (271)
.+|.|.+.+..|.++|.+..+++.++- -.++.+.-++..| .-|+
T Consensus 264 ~~pvlii~G~~D~~~p~~~~~~~~~~~----pn~~~~~I~~~gH--------~~h~ 307 (326)
T KOG1454|consen 264 KCPVLIIWGDKDQIVPLELAEELKKKL----PNAELVEIPGAGH--------LPHL 307 (326)
T ss_pred CCceEEEEcCcCCccCHHHHHHHHhhC----CCceEEEeCCCCc--------cccc
Confidence 499999999999999999544444333 4677788999999 8887
No 106
>COG2945 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=51.32 E-value=17 Score=31.16 Aligned_cols=42 Identities=17% Similarity=0.187 Sum_probs=32.1
Q ss_pred CCCCCCeEEEecCCCCcCChhHHHHHHHHHHHcCCcEEEEEcCCCCC
Q 045563 207 NPPACPHLYLYSTGDKVIPYQSVELLIEEQRKTGRKVFSVILGHLPT 253 (271)
Q Consensus 207 ~~~~~p~LyiYS~~D~li~~~~Ve~~~~~~r~~G~~V~~~~f~~S~H 253 (271)
.|.++|-++|+.+.|++++++.+-+.+ ++.++..+.-.++.|
T Consensus 146 ~P~P~~~lvi~g~~Ddvv~l~~~l~~~-----~~~~~~~i~i~~a~H 187 (210)
T COG2945 146 APCPSPGLVIQGDADDVVDLVAVLKWQ-----ESIKITVITIPGADH 187 (210)
T ss_pred cCCCCCceeEecChhhhhcHHHHHHhh-----cCCCCceEEecCCCc
Confidence 355889999999999777666554433 237888888999999
No 107
>PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A ....
Probab=50.67 E-value=28 Score=28.50 Aligned_cols=52 Identities=15% Similarity=0.140 Sum_probs=32.9
Q ss_pred HHHHHHHHHhhcccccCCCCceEEEEecccchHHHHHHHHHHhcCCCCccCCeeEEEEeCCCC
Q 045563 57 ADLSNEIVSWVSHEEQDGKQRCLIFHTFSNTGWFVCGSILASLQGREDLMQKIKGLIVDSGGA 119 (271)
Q Consensus 57 ~~~~~~i~~~l~~~~~~~~~~~il~H~FSnGG~~~~~~l~~~l~~~~~~~~~i~g~I~DS~Pg 119 (271)
..++..+..+++... ...+.+-.+|.||...+ .++.. ++ .+++++|++++|.
T Consensus 28 ~~~~~~~~~~~~~l~----~~~~~~vG~S~Gg~~~~-~~a~~---~p---~~v~~lvl~~~~~ 79 (230)
T PF00561_consen 28 DDLAADLEALREALG----IKKINLVGHSMGGMLAL-EYAAQ---YP---ERVKKLVLISPPP 79 (230)
T ss_dssp HHHHHHHHHHHHHHT----TSSEEEEEETHHHHHHH-HHHHH---SG---GGEEEEEEESESS
T ss_pred HHHHHHHHHHHHHhC----CCCeEEEEECCChHHHH-HHHHH---Cc---hhhcCcEEEeeec
Confidence 455555555444332 33499999999996443 33333 22 3899999999984
No 108
>KOG1552 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=50.45 E-value=11 Score=33.38 Aligned_cols=41 Identities=22% Similarity=0.352 Sum_probs=33.7
Q ss_pred CCCeEEEecCCCCcCChhHHHHHHHHHHHcCCcEEEEEcCCCCC
Q 045563 210 ACPHLYLYSTGDKVIPYQSVELLIEEQRKTGRKVFSVILGHLPT 253 (271)
Q Consensus 210 ~~p~LyiYS~~D~li~~~~Ve~~~~~~r~~G~~V~~~~f~~S~H 253 (271)
.+|.|++.|.+|++||+..=.+..+.++++ ++-..-.+..|
T Consensus 192 ~~PVLiiHgtdDevv~~sHg~~Lye~~k~~---~epl~v~g~gH 232 (258)
T KOG1552|consen 192 TCPVLIIHGTDDEVVDFSHGKALYERCKEK---VEPLWVKGAGH 232 (258)
T ss_pred cCCEEEEecccCceecccccHHHHHhcccc---CCCcEEecCCC
Confidence 689999999999999999988888888774 54455566777
No 109
>PRK06489 hypothetical protein; Provisional
Probab=50.07 E-value=19 Score=33.04 Aligned_cols=108 Identities=14% Similarity=0.037 Sum_probs=51.6
Q ss_pred CccEEEEEccCCCchHHH-HHHHHH-H------hhCCcceEEEeecccceee-cccch--h-hhhhHHHHHHHHHHhhcc
Q 045563 2 TAVTVVLLGWLGARRKHL-RRYVEW-Y------NSRGINAITFVVEAKELLS-FDLGR--G-VEKRIADLSNEIVSWVSH 69 (271)
Q Consensus 2 ~~~lVvl~gW~ga~~khl-~KY~~~-Y------~~~g~~~l~~~~~~~~~~~-~~~g~--~-~~~~~~~~~~~i~~~l~~ 69 (271)
.+|||++-||.+.....- .-..+. + ...++.++.+-.+..-.-. +..+. . ..-.+..+++.+.+.+.+
T Consensus 69 gpplvllHG~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~Via~Dl~GhG~S~~p~~~~~~~~~~~~~~~~a~~~~~~l~~ 148 (360)
T PRK06489 69 DNAVLVLHGTGGSGKSFLSPTFAGELFGPGQPLDASKYFIILPDGIGHGKSSKPSDGLRAAFPRYDYDDMVEAQYRLVTE 148 (360)
T ss_pred CCeEEEeCCCCCchhhhccchhHHHhcCCCCcccccCCEEEEeCCCCCCCCCCCCcCCCCCCCcccHHHHHHHHHHHHHH
Confidence 468999999998654321 111111 1 1345666666554321100 10000 0 001244566655554422
Q ss_pred cccCCCCceE-EEEecccchHHHHHHHHHHhcCCCCccCCeeEEE-EeCCCC
Q 045563 70 EEQDGKQRCL-IFHTFSNTGWFVCGSILASLQGREDLMQKIKGLI-VDSGGA 119 (271)
Q Consensus 70 ~~~~~~~~~i-l~H~FSnGG~~~~~~l~~~l~~~~~~~~~i~g~I-~DS~Pg 119 (271)
.- .-.++ ++=.+|+||...+ .+... ++ .+++++| ++|.|+
T Consensus 149 ~l---gi~~~~~lvG~SmGG~vAl-~~A~~---~P---~~V~~LVLi~s~~~ 190 (360)
T PRK06489 149 GL---GVKHLRLILGTSMGGMHAW-MWGEK---YP---DFMDALMPMASQPT 190 (360)
T ss_pred hc---CCCceeEEEEECHHHHHHH-HHHHh---Cc---hhhheeeeeccCcc
Confidence 21 12344 5899999996443 33222 22 4566666 566654
No 110
>KOG3253 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=48.05 E-value=33 Score=34.39 Aligned_cols=42 Identities=19% Similarity=0.248 Sum_probs=38.1
Q ss_pred CCCCeEEEecCCCCcCChhHHHHHHHHHHHcCCcEEEEEcCCCCC
Q 045563 209 PACPHLYLYSTGDKVIPYQSVELLIEEQRKTGRKVFSVILGHLPT 253 (271)
Q Consensus 209 ~~~p~LyiYS~~D~li~~~~Ve~~~~~~r~~G~~V~~~~f~~S~H 253 (271)
.+.|.||+-+.+|.+|+.+..|++.+.+++ .++.+.-++..|
T Consensus 303 mk~PVLFV~Gsnd~mcspn~ME~vreKMqA---~~elhVI~~adh 344 (784)
T KOG3253|consen 303 MKQPVLFVIGSNDHMCSPNSMEEVREKMQA---EVELHVIGGADH 344 (784)
T ss_pred cCCceEEEecCCcccCCHHHHHHHHHHhhc---cceEEEecCCCc
Confidence 378999999999999999999999999988 777888888888
No 111
>KOG2112 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=46.78 E-value=30 Score=29.78 Aligned_cols=43 Identities=21% Similarity=0.176 Sum_probs=39.0
Q ss_pred CCeEEEecCCCCcCChhHHHHHHHHHHHcCCcEEEEEcCCCCC
Q 045563 211 CPHLYLYSTGDKVIPYQSVELLIEEQRKTGRKVFSVILGHLPT 253 (271)
Q Consensus 211 ~p~LyiYS~~D~li~~~~Ve~~~~~~r~~G~~V~~~~f~~S~H 253 (271)
.|.+-.++++|+++|.+-=++..+..+..|.+++-+-|++-.|
T Consensus 145 ~~i~~~Hg~~d~~vp~~~g~~s~~~l~~~~~~~~f~~y~g~~h 187 (206)
T KOG2112|consen 145 TPILLCHGTADPLVPFRFGEKSAQFLKSLGVRVTFKPYPGLGH 187 (206)
T ss_pred chhheecccCCceeehHHHHHHHHHHHHcCCceeeeecCCccc
Confidence 4678889999999999999999999999999988888888888
No 112
>COG1073 Hydrolases of the alpha/beta superfamily [General function prediction only]
Probab=46.51 E-value=27 Score=29.98 Aligned_cols=41 Identities=22% Similarity=0.229 Sum_probs=36.2
Q ss_pred CCeEEEecCCCCcCChhHHHHHHHHHHHcCCcEEEEEcCCCCC
Q 045563 211 CPHLYLYSTGDKVIPYQSVELLIEEQRKTGRKVFSVILGHLPT 253 (271)
Q Consensus 211 ~p~LyiYS~~D~li~~~~Ve~~~~~~r~~G~~V~~~~f~~S~H 253 (271)
.|-|++.+..|.++|.+.-++..+.++.. +.....+++..|
T Consensus 233 ~P~l~~~G~~D~~vp~~~~~~~~~~~~~~--~~~~~~~~~~~H 273 (299)
T COG1073 233 RPVLLVHGERDEVVPLRDAEDLYEAARER--PKKLLFVPGGGH 273 (299)
T ss_pred cceEEEecCCCcccchhhhHHHHhhhccC--CceEEEecCCcc
Confidence 79999999999999999999999988886 666667788888
No 113
>PF00756 Esterase: Putative esterase; InterPro: IPR000801 This family contains several seemingly unrelated proteins, including human esterase D; mycobacterial antigen 85, which is responsible for the high affinity of mycobacteria to fibronectin; Corynebacterium glutamicum major secreted protein PS1; and hypothetical proteins from Escherichia coli, yeast, mycobacteria and Haemophilus influenzae.; PDB: 3LS2_A 1VA5_B 1DQZ_B 3HRH_A 1DQY_A 2GZR_A 2GZS_A 3GFF_A 1R88_A 3E4D_D ....
Probab=46.30 E-value=37 Score=28.99 Aligned_cols=38 Identities=13% Similarity=0.159 Sum_probs=25.0
Q ss_pred hhHHHHHHHHHHhhcccccCCCCceEEEEecccchHHHH
Q 045563 54 KRIADLSNEIVSWVSHEEQDGKQRCLIFHTFSNTGWFVC 92 (271)
Q Consensus 54 ~~~~~~~~~i~~~l~~~~~~~~~~~il~H~FSnGG~~~~ 92 (271)
+..+-+.++|..+++..-+....+ ..+-.+|+||..++
T Consensus 93 ~~~~~l~~el~p~i~~~~~~~~~~-~~i~G~S~GG~~Al 130 (251)
T PF00756_consen 93 AYETFLTEELIPYIEANYRTDPDR-RAIAGHSMGGYGAL 130 (251)
T ss_dssp HHHHHHHTHHHHHHHHHSSEEECC-EEEEEETHHHHHHH
T ss_pred ccceehhccchhHHHHhcccccce-eEEeccCCCcHHHH
Confidence 445667777777775543321222 89999999997654
No 114
>PRK11126 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional
Probab=46.23 E-value=27 Score=29.39 Aligned_cols=35 Identities=14% Similarity=0.184 Sum_probs=25.6
Q ss_pred CCCCeEEEecCCCCcCChhHHHHHHHHHHHcCCcEEEEEcCCCCC
Q 045563 209 PACPHLYLYSTGDKVIPYQSVELLIEEQRKTGRKVFSVILGHLPT 253 (271)
Q Consensus 209 ~~~p~LyiYS~~D~li~~~~Ve~~~~~~r~~G~~V~~~~f~~S~H 253 (271)
..+|.|+++++.|.++. +.+ ++. +.+.+.+++++|
T Consensus 187 i~~P~lii~G~~D~~~~-----~~~---~~~--~~~~~~i~~~gH 221 (242)
T PRK11126 187 LTFPFYYLCGERDSKFQ-----ALA---QQL--ALPLHVIPNAGH 221 (242)
T ss_pred cCCCeEEEEeCCcchHH-----HHH---HHh--cCeEEEeCCCCC
Confidence 47899999999998652 222 222 567788999999
No 115
>PF03959 FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 This entry represents proteins belonging to the AB hydrolase family. It consists of serine hydrolases of unknown specificity [, ] and includes uncharacterised proteins.; PDB: 1YCD_A.
Probab=42.80 E-value=44 Score=28.34 Aligned_cols=41 Identities=24% Similarity=0.184 Sum_probs=28.6
Q ss_pred CCCCeEEEecCCCCcCChhHHHHHHHHHHHcCCcEEEEEcCCCCC
Q 045563 209 PACPHLYLYSTGDKVIPYQSVELLIEEQRKTGRKVFSVILGHLPT 253 (271)
Q Consensus 209 ~~~p~LyiYS~~D~li~~~~Ve~~~~~~r~~G~~V~~~~f~~S~H 253 (271)
...|.|-++++.|.+++.+.-+.+++..... ..+...+..|
T Consensus 160 i~iPtlHv~G~~D~~~~~~~s~~L~~~~~~~----~~v~~h~gGH 200 (212)
T PF03959_consen 160 ISIPTLHVIGENDPVVPPERSEALAEMFDPD----ARVIEHDGGH 200 (212)
T ss_dssp ---EEEEEEETT-SSS-HHHHHHHHHHHHHH----EEEEEESSSS
T ss_pred CCCCeEEEEeCCCCCcchHHHHHHHHhccCC----cEEEEECCCC
Confidence 3689999999999999999999999988775 3334444666
No 116
>PRK07868 acyl-CoA synthetase; Validated
Probab=42.18 E-value=49 Score=35.15 Aligned_cols=42 Identities=17% Similarity=0.073 Sum_probs=32.1
Q ss_pred CCCCeEEEecCCCCcCChhHHHHHHHHHHHcCCcEEEEEcCCCCC
Q 045563 209 PACPHLYLYSTGDKVIPYQSVELLIEEQRKTGRKVFSVILGHLPT 253 (271)
Q Consensus 209 ~~~p~LyiYS~~D~li~~~~Ve~~~~~~r~~G~~V~~~~f~~S~H 253 (271)
..+|.|.|+++.|.++|.+.++...+... +.+ ..+.+.+..|
T Consensus 296 i~~P~L~i~G~~D~ivp~~~~~~l~~~i~--~a~-~~~~~~~~GH 337 (994)
T PRK07868 296 ITCPVLAFVGEVDDIGQPASVRGIRRAAP--NAE-VYESLIRAGH 337 (994)
T ss_pred CCCCEEEEEeCCCCCCCHHHHHHHHHhCC--CCe-EEEEeCCCCC
Confidence 46899999999999999999998865432 222 2256788899
No 117
>PF05448 AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR008391 This family consists of several bacterial acetyl xylan esterase proteins. Acetyl xylan esterases are enzymes that hydrolyse the ester linkages of the acetyl groups in position 2 and/or 3 of the xylose moieties of natural acetylated xylan from hardwood. These enzymes are one of the accessory enzymes which are part of the xylanolytic system, together with xylanases, beta-xylosidases, alpha-arabinofuranosidases and methylglucuronidases; these are all required for the complete hydrolysis of xylan [].; PDB: 1VLQ_H 3M81_E 3M82_D 3M83_C 3FCY_A 1ODS_F 1ODT_C 1L7A_A 3FYT_A 2XLB_F ....
Probab=41.86 E-value=2.8e+02 Score=25.37 Aligned_cols=42 Identities=17% Similarity=0.116 Sum_probs=30.3
Q ss_pred CCCCeEEEecCCCCcCChhHHHHHHHHHHHcCCcEEEEEcCCCCC
Q 045563 209 PACPHLYLYSTGDKVIPYQSVELLIEEQRKTGRKVFSVILGHLPT 253 (271)
Q Consensus 209 ~~~p~LyiYS~~D~li~~~~Ve~~~~~~r~~G~~V~~~~f~~S~H 253 (271)
.++|.++-.+-.|++||+..+-+..+.... +.+...|....|
T Consensus 261 i~~pvl~~~gl~D~~cPP~t~fA~yN~i~~---~K~l~vyp~~~H 302 (320)
T PF05448_consen 261 IKCPVLFSVGLQDPVCPPSTQFAAYNAIPG---PKELVVYPEYGH 302 (320)
T ss_dssp --SEEEEEEETT-SSS-HHHHHHHHCC--S---SEEEEEETT--S
T ss_pred cCCCEEEEEecCCCCCCchhHHHHHhccCC---CeeEEeccCcCC
Confidence 479999999999999999999888877754 578888999888
No 118
>PF08386 Abhydrolase_4: TAP-like protein; InterPro: IPR013595 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents a C-terminal domain associated with putative hydrolases and bacterial peptidases that belong to MEROPS peptidase family S33 (clan SC). They are related to a tripeptidyl aminopeptidase from Streptomyces lividans (Q54410 from SWISSPROT). A member of this family (Q6E3K7 from SWISSPROT) is thought to be involved in the C-terminal processing of propionicin F, a bacteriocidin characterised from Propionibacterium freudenreichii []. ; GO: 0008233 peptidase activity
Probab=40.76 E-value=45 Score=24.91 Aligned_cols=40 Identities=25% Similarity=0.214 Sum_probs=33.0
Q ss_pred CCCeEEEecCCCCcCChhHHHHHHHHHHHcCCcEEEEEcCCCCC
Q 045563 210 ACPHLYLYSTGDKVIPYQSVELLIEEQRKTGRKVFSVILGHLPT 253 (271)
Q Consensus 210 ~~p~LyiYS~~D~li~~~~Ve~~~~~~r~~G~~V~~~~f~~S~H 253 (271)
..|.|++=++.|.+.|++--++.++.... -..+.+++..|
T Consensus 34 ~~piL~l~~~~Dp~TP~~~a~~~~~~l~~----s~lvt~~g~gH 73 (103)
T PF08386_consen 34 APPILVLGGTHDPVTPYEGARAMAARLPG----SRLVTVDGAGH 73 (103)
T ss_pred CCCEEEEecCcCCCCcHHHHHHHHHHCCC----ceEEEEeccCc
Confidence 47999999999999999988877766443 36677899999
No 119
>PF08538 DUF1749: Protein of unknown function (DUF1749); InterPro: IPR013744 This is a plant and fungal family of unknown function. This family contains many hypothetical proteins. ; PDB: 2Q0X_B.
Probab=39.86 E-value=15 Score=33.46 Aligned_cols=109 Identities=13% Similarity=0.238 Sum_probs=49.5
Q ss_pred EEEEEccCC---CchHHHHHHHHHHhhCCcceEEEeecccceeecccch-hhhhhHHHHHHHHHHhhcccc-cCCCCceE
Q 045563 5 TVVLLGWLG---ARRKHLRRYVEWYNSRGINAITFVVEAKELLSFDLGR-GVEKRIADLSNEIVSWVSHEE-QDGKQRCL 79 (271)
Q Consensus 5 lVvl~gW~g---a~~khl~KY~~~Y~~~g~~~l~~~~~~~~~~~~~~g~-~~~~~~~~~~~~i~~~l~~~~-~~~~~~~i 79 (271)
.||..|=++ ..-.++..-++.-...+++.+.+...+... .+|. ...+..+++. .++++|.... .......|
T Consensus 35 ~llfIGGLtDGl~tvpY~~~La~aL~~~~wsl~q~~LsSSy~---G~G~~SL~~D~~eI~-~~v~ylr~~~~g~~~~~kI 110 (303)
T PF08538_consen 35 ALLFIGGLTDGLLTVPYLPDLAEALEETGWSLFQVQLSSSYS---GWGTSSLDRDVEEIA-QLVEYLRSEKGGHFGREKI 110 (303)
T ss_dssp EEEEE--TT--TT-STCHHHHHHHHT-TT-EEEEE--GGGBT---TS-S--HHHHHHHHH-HHHHHHHHHS------S-E
T ss_pred EEEEECCCCCCCCCCchHHHHHHHhccCCeEEEEEEecCccC---CcCcchhhhHHHHHH-HHHHHHHHhhccccCCccE
Confidence 445555332 344566666666678899998887666422 2221 2233333332 2233443331 11136689
Q ss_pred EEEecccchHHHHHHHHHHhcCCC--CccCCeeEEEEeCCCCCC
Q 045563 80 IFHTFSNTGWFVCGSILASLQGRE--DLMQKIKGLIVDSGGAGA 121 (271)
Q Consensus 80 l~H~FSnGG~~~~~~l~~~l~~~~--~~~~~i~g~I~DS~Pg~~ 121 (271)
++-.=|- || ..+++-+.+.. ....+|.|.|+-......
T Consensus 111 VLmGHST-Gc---Qdvl~Yl~~~~~~~~~~~VdG~ILQApVSDR 150 (303)
T PF08538_consen 111 VLMGHST-GC---QDVLHYLSSPNPSPSRPPVDGAILQAPVSDR 150 (303)
T ss_dssp EEEEECC-HH---HHHHHHHHH-TT---CCCEEEEEEEEE---T
T ss_pred EEEecCC-Cc---HHHHHHHhccCccccccceEEEEEeCCCCCh
Confidence 9988884 54 23333333322 236799999999766654
No 120
>KOG1455 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=38.36 E-value=28 Score=31.79 Aligned_cols=44 Identities=20% Similarity=0.139 Sum_probs=39.1
Q ss_pred CCCCCeEEEecCCCCcCChhHHHHHHHHHHHcCCcEEEEEcCCCCC
Q 045563 208 PPACPHLYLYSTGDKVIPYQSVELLIEEQRKTGRKVFSVILGHLPT 253 (271)
Q Consensus 208 ~~~~p~LyiYS~~D~li~~~~Ve~~~~~~r~~G~~V~~~~f~~S~H 253 (271)
....|-+.+.+++|.+++.+..+++.+.|..+ |-+.+.++|-=|
T Consensus 244 ~vtvPflilHG~dD~VTDp~~Sk~Lye~A~S~--DKTlKlYpGm~H 287 (313)
T KOG1455|consen 244 EVTVPFLILHGTDDKVTDPKVSKELYEKASSS--DKTLKLYPGMWH 287 (313)
T ss_pred cccccEEEEecCCCcccCcHHHHHHHHhccCC--CCceeccccHHH
Confidence 45789999999999999999999999999875 666677999888
No 121
>PF01674 Lipase_2: Lipase (class 2); InterPro: IPR002918 Lipases or triacylglycerol acylhydrolases hydrolyse ester bonds in triacylglycerol giving diacylglycerol, monoacylglycerol, glycerol and free fatty acids []. This group of lipases has been called class 2 as they are not clearly related to other lipase families, and includes LipA and LipB from Bacillus subtilis [] and uncharacterised proteins from Caenorhabditis.; PDB: 2VTV_B 2X76_A 2X5X_A 2QXU_A 3QMM_A 1I6W_A 3D2C_J 2QXT_B 1R50_A 1T2N_A ....
Probab=37.77 E-value=1e+02 Score=26.64 Aligned_cols=86 Identities=10% Similarity=0.002 Sum_probs=41.0
Q ss_pred CccEEEEEccCCCchHHHHHHHHHHhhCCcce--E-EEeeccccee-ecccchhhhhhHHHHHHHHHHhhcccccCCCCc
Q 045563 2 TAVTVVLLGWLGARRKHLRRYVEWYNSRGINA--I-TFVVEAKELL-SFDLGRGVEKRIADLSNEIVSWVSHEEQDGKQR 77 (271)
Q Consensus 2 ~~~lVvl~gW~ga~~khl~KY~~~Y~~~g~~~--l-~~~~~~~~~~-~~~~g~~~~~~~~~~~~~i~~~l~~~~~~~~~~ 77 (271)
.+|+|++.|..+........++....+.|+.. + -..-...... ............+.+..-|.+.++.. ..
T Consensus 1 ~~PVVlVHG~~~~~~~~w~~~~~~l~~~GY~~~~vya~tyg~~~~~~~~~~~~~~~~~~~~l~~fI~~Vl~~T----Ga- 75 (219)
T PF01674_consen 1 NRPVVLVHGTGGNAYSNWSTLAPYLKAAGYCDSEVYALTYGSGNGSPSVQNAHMSCESAKQLRAFIDAVLAYT----GA- 75 (219)
T ss_dssp S--EEEE--TTTTTCGGCCHHHHHHHHTT--CCCEEEE--S-CCHHTHHHHHHB-HHHHHHHHHHHHHHHHHH----T--
T ss_pred CCCEEEECCCCcchhhCHHHHHHHHHHcCCCcceeEeccCCCCCCCCcccccccchhhHHHHHHHHHHHHHhh----CC-
Confidence 36999999999867777799999999999885 2 2221111110 00000000111233444444434322 24
Q ss_pred eEEEEecccchHHHH
Q 045563 78 CLIFHTFSNTGWFVC 92 (271)
Q Consensus 78 ~il~H~FSnGG~~~~ 92 (271)
.|=+=..|.||...-
T Consensus 76 kVDIVgHS~G~~iaR 90 (219)
T PF01674_consen 76 KVDIVGHSMGGTIAR 90 (219)
T ss_dssp -EEEEEETCHHHHHH
T ss_pred EEEEEEcCCcCHHHH
Confidence 788888899996443
No 122
>PF10230 DUF2305: Uncharacterised conserved protein (DUF2305); InterPro: IPR019363 This entry contains proteins that have no known function.
Probab=37.27 E-value=1.1e+02 Score=27.01 Aligned_cols=43 Identities=16% Similarity=0.233 Sum_probs=32.7
Q ss_pred CCCeEEEecCCCCcCChhHHHHHHHHHHHcCCcEEEEEcCCCCC
Q 045563 210 ACPHLYLYSTGDKVIPYQSVELLIEEQRKTGRKVFSVILGHLPT 253 (271)
Q Consensus 210 ~~p~LyiYS~~D~li~~~~Ve~~~~~~r~~G~~V~~~~f~~S~H 253 (271)
..+-.++|+++|.=||-+.-|+..+...+...+|.... +|=+|
T Consensus 221 ~~kl~f~fg~~D~Wvp~~~~~~l~~~~~~~~~~~~v~~-~~i~H 263 (266)
T PF10230_consen 221 GDKLWFYFGQNDHWVPNETRDELIERYPGHEPDVVVDE-EGIPH 263 (266)
T ss_pred CCEEEEEEeCCCCCCCHHHHHHHHHHcCCCCCeEEEec-CCCCC
Confidence 34556699999999999999999888775545565555 77777
No 123
>PRK10477 outer membrane lipoprotein Blc; Provisional
Probab=37.21 E-value=43 Score=27.71 Aligned_cols=38 Identities=16% Similarity=0.196 Sum_probs=31.3
Q ss_pred CCCeEEEecCCCCcCChhHHHHHHHHHHHcCCcEEEEEc
Q 045563 210 ACPHLYLYSTGDKVIPYQSVELLIEEQRKTGRKVFSVIL 248 (271)
Q Consensus 210 ~~p~LyiYS~~D~li~~~~Ve~~~~~~r~~G~~V~~~~f 248 (271)
....++|||+. +-++.+..+++.+.++++|++++..+|
T Consensus 134 ~~~~~wIlsR~-p~l~~~~~~~~~~~~~~~G~d~~~l~~ 171 (177)
T PRK10477 134 DRDYLWILSRT-PTISDEVKQQMLAVATREGFDVSKLIW 171 (177)
T ss_pred CCCEEEEEeCC-CCCCHHHHHHHHHHHHHcCCCHHHeEE
Confidence 56789999986 445678899999999999999876665
No 124
>TIGR01849 PHB_depoly_PhaZ polyhydroxyalkanoate depolymerase, intracellular. This model represents an intracellular depolymerase for polyhydroxyalkanoate (PHA), a carbon and energy storing polyester that accumulates in granules in many bacterial species when carbon sources are abundant but other nutrients are limiting. This family is named for PHAs generally, rather than polyhydroxybutyrate (PHB) specificially as in Ralstonia eutropha H16, to avoid overcalling chemical specificity in other species. Note that this family lacks the classic GXSXG lipase motif and instead shows weak similarity to some
Probab=36.48 E-value=54 Score=31.23 Aligned_cols=43 Identities=5% Similarity=-0.092 Sum_probs=34.5
Q ss_pred CCeEEEecCCCCcCChhHHHHHHHHHHHcCC-cEEEEEcCCCCC
Q 045563 211 CPHLYLYSTGDKVIPYQSVELLIEEQRKTGR-KVFSVILGHLPT 253 (271)
Q Consensus 211 ~p~LyiYS~~D~li~~~~Ve~~~~~~r~~G~-~V~~~~f~~S~H 253 (271)
+|-|-+.++.|+++|+++.+...+.....+- +.......+.+|
T Consensus 339 ~pll~V~ge~D~I~p~~qt~aa~~l~~~~~s~~k~~~~~~~~GH 382 (406)
T TIGR01849 339 VALLTVEGENDDISGLGQTKAALRLCTGIPEDMKRHHLQPGVGH 382 (406)
T ss_pred cceEEEeccCCCcCCHHHhHHHHHHhhcCChhhceEeecCCCCe
Confidence 8999999999999999999999988655432 444556667778
No 125
>KOG4178 consensus Soluble epoxide hydrolase [Lipid transport and metabolism]
Probab=36.16 E-value=55 Score=30.13 Aligned_cols=44 Identities=25% Similarity=0.447 Sum_probs=31.3
Q ss_pred CCCCeEEEecCCCCcCChhHHHHHHHHHHHc-CCcEEEEEcCCCCCCC
Q 045563 209 PACPHLYLYSTGDKVIPYQSVELLIEEQRKT-GRKVFSVILGHLPTWI 255 (271)
Q Consensus 209 ~~~p~LyiYS~~D~li~~~~Ve~~~~~~r~~-G~~V~~~~f~~S~H~~ 255 (271)
...|.++||+..|.+.+.. .+.+..|+. =..-+.+..+|..||+
T Consensus 257 i~iPv~fi~G~~D~v~~~p---~~~~~~rk~vp~l~~~vv~~~~gH~v 301 (322)
T KOG4178|consen 257 ITIPVLFIWGDLDPVLPYP---IFGELYRKDVPRLTERVVIEGIGHFV 301 (322)
T ss_pred cccceEEEEecCcccccch---hHHHHHHHhhccccceEEecCCcccc
Confidence 4789999999999999998 444444442 1222567788888854
No 126
>KOG0538 consensus Glycolate oxidase [Energy production and conversion]
Probab=34.67 E-value=71 Score=29.37 Aligned_cols=38 Identities=24% Similarity=0.386 Sum_probs=28.4
Q ss_pred CCCCeEEEecCCCCcCChhHHHHHHHHHHHcCCcEEEEEcCCCCC
Q 045563 209 PACPHLYLYSTGDKVIPYQSVELLIEEQRKTGRKVFSVILGHLPT 253 (271)
Q Consensus 209 ~~~p~LyiYS~~D~li~~~~Ve~~~~~~r~~G~~V~~~~f~~S~H 253 (271)
.++=|||+|+. .+-.++.++.+++.|++.-.+-- |+|-
T Consensus 122 ~rwfQLYvykd------r~It~~Lv~raEk~GfkAlvlTv-DtP~ 159 (363)
T KOG0538|consen 122 IRWFQLYVYKD------RDITEQLVKRAEKAGFKALVLTV-DTPR 159 (363)
T ss_pred cEEEEEEecCc------hHHHHHHHHHHHHcCceEEEEEe-cccc
Confidence 35679999997 55678999999999998644333 3666
No 127
>PF08212 Lipocalin_2: Lipocalin-like domain; InterPro: IPR000566 Proteins which transport small hydrophobic molecules such as steroids, bilins, retinoids, and lipids share limited regions of sequence homology and a common tertiary structure architecture [, , , , ]. This is an eight stranded antiparallel beta-barrel with a repeated + 1 topology enclosing a internal ligand binding site [, ]. The name 'lipocalin' has been proposed [] for this protein family, but cytosolic fatty-acid binding proteins are also included. The sequences of most members of the family, the core or kernal lipocalins, are characterised by three short conserved stretches of residues, while others, the outlier lipocalin group, share only one or two of these [, ]. Proteins known to belong to this family include alpha-1-microglobulin (protein HC); alpha-1-acid glycoprotein (orosomucoid) []; aphrodisin; apolipoprotein D; beta-lactoglobulin; complement component C8 gamma chain []; crustacyanin []; epididymal-retinoic acid binding protein (E-RABP) []; insectacyanin; odorant-binding protein (OBP); human pregnancy-associated endometrial alpha-2 globulin; probasin (PB), a rat prostatic protein; prostaglandin D synthase (5.3.99.2 from EC) []; purpurin; Von Ebner's gland protein (VEGP) []; and lizard epididymal secretory protein IV (LESP IV) [].; GO: 0005488 binding; PDB: 3EBW_B 1QWD_A 2ACO_A 3MBT_A.
Probab=33.70 E-value=46 Score=26.35 Aligned_cols=38 Identities=13% Similarity=0.248 Sum_probs=28.0
Q ss_pred CCCeEEEecCCCCcCChhHHHHHHHHHHHcCCcEEEEEc
Q 045563 210 ACPHLYLYSTGDKVIPYQSVELLIEEQRKTGRKVFSVIL 248 (271)
Q Consensus 210 ~~p~LyiYS~~D~li~~~~Ve~~~~~~r~~G~~V~~~~f 248 (271)
....++|.|+. +-++.+.+++..+.++++|+++...++
T Consensus 103 ~~~~~WILsR~-p~~~~~~~~~~~~~~~~~G~d~~~l~~ 140 (143)
T PF08212_consen 103 DREYLWILSRT-PQLSEETYAEILDRAKQQGYDVSKLIW 140 (143)
T ss_dssp CCCEEEEEESS-SS--HHHHHHHHHHHHHTT--GGGEEE
T ss_pred CCCEEEEEeCC-CCCCHHHHHHHHHHHHHcCCCHHHeEE
Confidence 45689999998 667889999999999999998765443
No 128
>cd01467 vWA_BatA_type VWA BatA type: Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF). Typically, the vWA domain is made up of approximately 200 amino acid residues folded into a classic a/b para-rossmann type of fold. The vWA domain, since its discovery, has drawn great interest because of its widespread occurrence and its involvement in a wide variety of important cellular functions. These include basal membrane formation, cell migration, cell differentiation, adhesion, haemostasis, signaling, chromosomal stability, malignant transformation and in immune defenses. In integrins these domains form heterodimers while in vWF it forms multimers. There are different interaction surfaces of this domain as seen by the various molecules it complexes with. Ligand binding in most cases is mediated by the presence of a metal ion dependent adhesion site termed as the MIDAS motif that is a characteristic feature of most, if
Probab=33.29 E-value=2.2e+02 Score=22.75 Aligned_cols=41 Identities=12% Similarity=0.213 Sum_probs=30.7
Q ss_pred CCCeEEEecCCCCcCChhHHHHHHHHHHHcCCcEEEEEcCC
Q 045563 210 ACPHLYLYSTGDKVIPYQSVELLIEEQRKTGRKVFSVILGH 250 (271)
Q Consensus 210 ~~p~LyiYS~~D~li~~~~Ve~~~~~~r~~G~~V~~~~f~~ 250 (271)
....+++.|....-....+.++.++.++++|+.|...-+.+
T Consensus 102 ~~~~iiliTDG~~~~g~~~~~~~~~~~~~~gi~i~~i~ig~ 142 (180)
T cd01467 102 KERVIVLLTDGENNAGEIDPATAAELAKNKGVRIYTIGVGK 142 (180)
T ss_pred CCCEEEEEeCCCCCCCCCCHHHHHHHHHHCCCEEEEEEecC
Confidence 45689999988665544445556677788899999998886
No 129
>COG0596 MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=32.68 E-value=2.5e+02 Score=22.28 Aligned_cols=42 Identities=17% Similarity=0.185 Sum_probs=29.4
Q ss_pred CCCCeEEEecCCCCcCChhHHHHHHHHHHHcCCcEEEEEcCCCCC
Q 045563 209 PACPHLYLYSTGDKVIPYQSVELLIEEQRKTGRKVFSVILGHLPT 253 (271)
Q Consensus 209 ~~~p~LyiYS~~D~li~~~~Ve~~~~~~r~~G~~V~~~~f~~S~H 253 (271)
..+|.+++++..|.+.|.+..+...+..+ + ......++++.|
T Consensus 220 ~~~P~l~i~g~~d~~~~~~~~~~~~~~~~--~-~~~~~~~~~~gH 261 (282)
T COG0596 220 ITVPTLIIHGEDDPVVPAELARRLAAALP--N-DARLVVIPGAGH 261 (282)
T ss_pred CCCCeEEEecCCCCcCCHHHHHHHHhhCC--C-CceEEEeCCCCC
Confidence 36999999999997777766222222222 2 567778999999
No 130
>PF08357 SEFIR: SEFIR domain; InterPro: IPR013568 This domain is found in IL17 receptors (IL17Rs, e.g. Q60943 from SWISSPROT) and SEF proteins (e.g. Q8QHJ9 from SWISSPROT). The latter are feedback inhibitors of FGF signalling and are also thought to be receptors. Due to its similarity to the TIR domain (IPR000157 from INTERPRO), the SEFIR region is thought to be involved in homotypic interactions with other SEFIR/TIR-domain-containing proteins. Thus, SEFs and IL17Rs may be involved in TOLL/IL1R-like signalling pathways [].
Probab=32.66 E-value=45 Score=26.35 Aligned_cols=37 Identities=24% Similarity=0.079 Sum_probs=30.4
Q ss_pred eEEEecCCCCcCChhHHHHHHHHHHHc-CCcEEEEEcCC
Q 045563 213 HLYLYSTGDKVIPYQSVELLIEEQRKT-GRKVFSVILGH 250 (271)
Q Consensus 213 ~LyiYS~~D~li~~~~Ve~~~~~~r~~-G~~V~~~~f~~ 250 (271)
.+.+||. |.--.-+-|.++++..++. |++|..-.|+.
T Consensus 3 VfI~Ys~-d~~~h~~~V~~la~~L~~~~g~~V~lD~~~~ 40 (150)
T PF08357_consen 3 VFISYSH-DSEEHKEWVLALAEFLRQNCGIDVILDQWEL 40 (150)
T ss_pred EEEEeCC-CCHHHHHHHHHHHHHHHhccCCceeecHHhh
Confidence 5668998 5555567799999999999 99998888886
No 131
>PLN02872 triacylglycerol lipase
Probab=32.17 E-value=1.3e+02 Score=28.46 Aligned_cols=38 Identities=11% Similarity=0.029 Sum_probs=24.5
Q ss_pred ccEEEEEccCCCchHHH-----HHHHHHHhhCCcceEEEeecc
Q 045563 3 AVTVVLLGWLGARRKHL-----RRYVEWYNSRGINAITFVVEA 40 (271)
Q Consensus 3 ~~lVvl~gW~ga~~khl-----~KY~~~Y~~~g~~~l~~~~~~ 40 (271)
+|++++.||+++..... ..-.....+.|+++.....+.
T Consensus 75 ~~Vll~HGl~~ss~~w~~~~~~~sla~~La~~GydV~l~n~RG 117 (395)
T PLN02872 75 PPVLLQHGLFMAGDAWFLNSPEQSLGFILADHGFDVWVGNVRG 117 (395)
T ss_pred CeEEEeCcccccccceeecCcccchHHHHHhCCCCcccccccc
Confidence 57888999986665432 112223567899998776554
No 132
>PF04025 DUF370: Domain of unknown function (DUF370); InterPro: IPR007169 This is a bacterial family of unknown function.
Probab=32.15 E-value=50 Score=23.52 Aligned_cols=34 Identities=38% Similarity=0.503 Sum_probs=26.5
Q ss_pred HHHHHHHHHHH--------cCCcEEEEEcCCCCCCCCcCCcc
Q 045563 228 SVELLIEEQRK--------TGRKVFSVILGHLPTWITSGLSP 261 (271)
Q Consensus 228 ~Ve~~~~~~r~--------~G~~V~~~~f~~S~H~~~~~~~~ 261 (271)
.+.+..+++|+ .|.+.+...+-||.|.+-|.++|
T Consensus 25 p~Krl~~~ak~~~~lIdaT~GrktrsviitdsghviLSa~~~ 66 (73)
T PF04025_consen 25 PIKRLIQEAKEEGKLIDATYGRKTRSVIITDSGHVILSALQP 66 (73)
T ss_pred hHHHHHHHHHHcCcEEEeeCCCceeEEEEEcCCcEEEeeCCH
Confidence 47778888877 47778899999999976666654
No 133
>COG1654 BirA Biotin operon repressor [Transcription]
Probab=32.13 E-value=55 Score=23.62 Aligned_cols=21 Identities=29% Similarity=0.254 Sum_probs=18.2
Q ss_pred hhHHHHHHHHHHHcCCcEEEE
Q 045563 226 YQSVELLIEEQRKTGRKVFSV 246 (271)
Q Consensus 226 ~~~Ve~~~~~~r~~G~~V~~~ 246 (271)
-..|.+|++..|+.|++|+..
T Consensus 33 RtaVwK~Iq~Lr~~G~~I~s~ 53 (79)
T COG1654 33 RTAVWKHIQQLREEGVDIESV 53 (79)
T ss_pred HHHHHHHHHHHHHhCCceEec
Confidence 358999999999999999764
No 134
>PF11633 SUD-M: Single-stranded poly(A) binding domain; InterPro: IPR024375 This domain identifies non-structural protein 3 (Nsp3). It is found in human SARS coronavirus polyprotein 1a and 1ab, and in related coronavirus polyproteins [].; PDB: 2KQV_A 2W2G_A 2WCT_D 2JZE_A 2JZF_A 2RNK_A 2JZD_A.
Probab=31.62 E-value=49 Score=26.47 Aligned_cols=44 Identities=23% Similarity=0.505 Sum_probs=29.0
Q ss_pred CCCeEEEecCCCCcCChhHHHHHHHHHHHcCCcEEEEEcCCCCCCCCcCCcccc
Q 045563 210 ACPHLYLYSTGDKVIPYQSVELLIEEQRKTGRKVFSVILGHLPTWITSGLSPAD 263 (271)
Q Consensus 210 ~~p~LyiYS~~D~li~~~~Ve~~~~~~r~~G~~V~~~~f~~S~H~~~~~~~~v~ 263 (271)
..-+.|+||+.|++ .+.+.++...|..+-+-=|. +||.|++++.
T Consensus 67 ~G~~fY~Ys~~~Pl------~~vi~~lNsl~~~i~~mP~G----yvthGl~La~ 110 (142)
T PF11633_consen 67 DGVQFYFYSSKTPL------TDVIKALNSLGKPIITMPFG----YVTHGLNLAE 110 (142)
T ss_dssp -SSEEEEE-TTS-H------HHHHHHHCCCTS-EEES-TT----CCCCTB-HHH
T ss_pred cceEEEEEecCCcH------HHHHHHHhhcCCCceeeeee----eeeccccHHH
Confidence 45699999999975 56677777778888777777 6777877754
No 135
>TIGR00976 /NonD putative hydrolase, CocE/NonD family. This model represents a protein subfamily that includes the cocaine esterase CocE, several glutaryl-7-ACA acylases, and the putative diester hydrolase NonD of Streptomyces griseus (all hydrolases). This family shows extensive, low-level similarity to a family of xaa-pro dipeptidyl-peptidases, and local similarity by PSI-BLAST to many other hydrolases.
Probab=31.53 E-value=1.8e+02 Score=28.50 Aligned_cols=106 Identities=9% Similarity=0.049 Sum_probs=55.6
Q ss_pred CccEEE-EEccCCCch---HHHHHHHHHHhhCCcceEEEeecccce---eecccchhhhhhHHHHHHHHHHhhcccccCC
Q 045563 2 TAVTVV-LLGWLGARR---KHLRRYVEWYNSRGINAITFVVEAKEL---LSFDLGRGVEKRIADLSNEIVSWVSHEEQDG 74 (271)
Q Consensus 2 ~~~lVv-l~gW~ga~~---khl~KY~~~Y~~~g~~~l~~~~~~~~~---~~~~~g~~~~~~~~~~~~~i~~~l~~~~~~~ 74 (271)
+.|+|| +.||..... ..-..+.+.+.+.|+.++.+-.+..-. -....+ ....+++. .+++++.... .
T Consensus 21 ~~P~Il~~~gyg~~~~~~~~~~~~~~~~l~~~Gy~vv~~D~RG~g~S~g~~~~~~---~~~~~D~~-~~i~~l~~q~--~ 94 (550)
T TIGR00976 21 PVPVILSRTPYGKDAGLRWGLDKTEPAWFVAQGYAVVIQDTRGRGASEGEFDLLG---SDEAADGY-DLVDWIAKQP--W 94 (550)
T ss_pred CCCEEEEecCCCCchhhccccccccHHHHHhCCcEEEEEeccccccCCCceEecC---cccchHHH-HHHHHHHhCC--C
Confidence 335444 456654321 122336677889999999998765311 000011 11223333 3334443332 1
Q ss_pred CCceEEEEecccchHHHHHHHHHHhcCCCCccCCeeEEEEeCCCCC
Q 045563 75 KQRCLIFHTFSNTGWFVCGSILASLQGREDLMQKIKGLIVDSGGAG 120 (271)
Q Consensus 75 ~~~~il~H~FSnGG~~~~~~l~~~l~~~~~~~~~i~g~I~DS~Pg~ 120 (271)
...+|.+-.+|.||...+.. +. .....++++|..+....
T Consensus 95 ~~~~v~~~G~S~GG~~a~~~---a~----~~~~~l~aiv~~~~~~d 133 (550)
T TIGR00976 95 CDGNVGMLGVSYLAVTQLLA---AV----LQPPALRAIAPQEGVWD 133 (550)
T ss_pred CCCcEEEEEeChHHHHHHHH---hc----cCCCceeEEeecCcccc
Confidence 24589999999999643311 11 11246788887665543
No 136
>PRK07868 acyl-CoA synthetase; Validated
Probab=31.48 E-value=2.6e+02 Score=29.69 Aligned_cols=104 Identities=12% Similarity=0.125 Sum_probs=52.1
Q ss_pred ccEEEEEccCCCchHHHHHH-----HHHHhhCCcceEEEeecccceeecccchh-hhhhHHHHHHHHHHhhcccccCCCC
Q 045563 3 AVTVVLLGWLGARRKHLRRY-----VEWYNSRGINAITFVVEAKELLSFDLGRG-VEKRIADLSNEIVSWVSHEEQDGKQ 76 (271)
Q Consensus 3 ~~lVvl~gW~ga~~khl~KY-----~~~Y~~~g~~~l~~~~~~~~~~~~~~g~~-~~~~~~~~~~~i~~~l~~~~~~~~~ 76 (271)
+||+++.||.+.. ...... +....+.|+++..+.-.. +..... ....+...+..+.+.+..-... ..
T Consensus 68 ~plllvhg~~~~~-~~~d~~~~~s~v~~L~~~g~~v~~~d~G~-----~~~~~~~~~~~l~~~i~~l~~~l~~v~~~-~~ 140 (994)
T PRK07868 68 PPVLMVHPMMMSA-DMWDVTRDDGAVGILHRAGLDPWVIDFGS-----PDKVEGGMERNLADHVVALSEAIDTVKDV-TG 140 (994)
T ss_pred CcEEEECCCCCCc-cceecCCcccHHHHHHHCCCEEEEEcCCC-----CChhHcCccCCHHHHHHHHHHHHHHHHHh-hC
Confidence 6999999997654 222221 455667888887765110 110000 0011222223333333211000 12
Q ss_pred ceEEEEecccchHHHHHHHHHHhcCCCCccCCeeEEEEeCCCC
Q 045563 77 RCLIFHTFSNTGWFVCGSILASLQGREDLMQKIKGLIVDSGGA 119 (271)
Q Consensus 77 ~~il~H~FSnGG~~~~~~l~~~l~~~~~~~~~i~g~I~DS~Pg 119 (271)
.++.+...|.||.+.+.... ++ ...+++++|+=.+|-
T Consensus 141 ~~v~lvG~s~GG~~a~~~aa--~~----~~~~v~~lvl~~~~~ 177 (994)
T PRK07868 141 RDVHLVGYSQGGMFCYQAAA--YR----RSKDIASIVTFGSPV 177 (994)
T ss_pred CceEEEEEChhHHHHHHHHH--hc----CCCccceEEEEeccc
Confidence 47999999999976543321 21 123577877655554
No 137
>KOG2541 consensus Palmitoyl protein thioesterase [Lipid transport and metabolism; Posttranslational modification, protein turnover, chaperones]
Probab=29.87 E-value=4.3e+02 Score=23.99 Aligned_cols=105 Identities=9% Similarity=0.067 Sum_probs=58.3
Q ss_pred CccEEEEEccCC-CchHHHHHHHHHHhhCCcceEEEeecccceeecccchhhhhhHHHHHHHHHHhhcccccCCCCceEE
Q 045563 2 TAVTVVLLGWLG-ARRKHLRRYVEWYNSRGINAITFVVEAKELLSFDLGRGVEKRIADLSNEIVSWVSHEEQDGKQRCLI 80 (271)
Q Consensus 2 ~~~lVvl~gW~g-a~~khl~KY~~~Y~~~g~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~l~~~~~~~~~~~il 80 (271)
+.|+||+.|=.+ |..--++..++.-++ -+.+..++....+-..-++-...++.++-+.++|. ..+ .-+..+.
T Consensus 23 ~~P~ii~HGigd~c~~~~~~~~~q~l~~-~~g~~v~~leig~g~~~s~l~pl~~Qv~~~ce~v~-~m~-----~lsqGyn 95 (296)
T KOG2541|consen 23 PVPVIVWHGIGDSCSSLSMANLTQLLEE-LPGSPVYCLEIGDGIKDSSLMPLWEQVDVACEKVK-QMP-----ELSQGYN 95 (296)
T ss_pred cCCEEEEeccCcccccchHHHHHHHHHh-CCCCeeEEEEecCCcchhhhccHHHHHHHHHHHHh-cch-----hccCceE
Confidence 469999999764 222224455555555 66776666555443222221223444555555443 121 1367888
Q ss_pred EEecccchHHHHHHHHHHhcCCCCccCCeeEEEEeCCCC
Q 045563 81 FHTFSNTGWFVCGSILASLQGREDLMQKIKGLIVDSGGA 119 (271)
Q Consensus 81 ~H~FSnGG~~~~~~l~~~l~~~~~~~~~i~g~I~DS~Pg 119 (271)
+=.+|-|| ..+.++++...+ .|++-.|==+.|-
T Consensus 96 ivg~SQGg-lv~Raliq~cd~-----ppV~n~ISL~gPh 128 (296)
T KOG2541|consen 96 IVGYSQGG-LVARALIQFCDN-----PPVKNFISLGGPH 128 (296)
T ss_pred EEEEcccc-HHHHHHHHhCCC-----CCcceeEeccCCc
Confidence 99999999 466666555432 3555555444443
No 138
>PLN03084 alpha/beta hydrolase fold protein; Provisional
Probab=29.85 E-value=3.6e+02 Score=25.28 Aligned_cols=104 Identities=13% Similarity=0.065 Sum_probs=49.3
Q ss_pred ccEEEEEccCCCchHHHHHHHHHHhhCCcceEEEeecccceeecccch-hhhhhHHHHHHHHHHhhcccccCCCCceEEE
Q 045563 3 AVTVVLLGWLGARRKHLRRYVEWYNSRGINAITFVVEAKELLSFDLGR-GVEKRIADLSNEIVSWVSHEEQDGKQRCLIF 81 (271)
Q Consensus 3 ~~lVvl~gW~ga~~khl~KY~~~Y~~~g~~~l~~~~~~~~~~~~~~g~-~~~~~~~~~~~~i~~~l~~~~~~~~~~~il~ 81 (271)
+++|++-||.+.... -.+......+ ++.++.+-.+..-........ ...-.+..+++.+.+++.+.. ..++.+
T Consensus 128 ~~ivllHG~~~~~~~-w~~~~~~L~~-~~~Via~DlpG~G~S~~p~~~~~~~ys~~~~a~~l~~~i~~l~----~~~~~L 201 (383)
T PLN03084 128 PPVLLIHGFPSQAYS-YRKVLPVLSK-NYHAIAFDWLGFGFSDKPQPGYGFNYTLDEYVSSLESLIDELK----SDKVSL 201 (383)
T ss_pred CeEEEECCCCCCHHH-HHHHHHHHhc-CCEEEEECCCCCCCCCCCcccccccCCHHHHHHHHHHHHHHhC----CCCceE
Confidence 589999999865543 3444444443 666666655543111100000 001134566666666664432 123333
Q ss_pred EecccchHHHHHHHHHHhcCCCCccCCeeEEEEeCCCC
Q 045563 82 HTFSNTGWFVCGSILASLQGREDLMQKIKGLIVDSGGA 119 (271)
Q Consensus 82 H~FSnGG~~~~~~l~~~l~~~~~~~~~i~g~I~DS~Pg 119 (271)
=..|.||... ..+... + ..+++++|+=++|.
T Consensus 202 vG~s~GG~ia-~~~a~~---~---P~~v~~lILi~~~~ 232 (383)
T PLN03084 202 VVQGYFSPPV-VKYASA---H---PDKIKKLILLNPPL 232 (383)
T ss_pred EEECHHHHHH-HHHHHh---C---hHhhcEEEEECCCC
Confidence 3345566432 222221 2 24566766655554
No 139
>COG3411 Ferredoxin [Energy production and conversion]
Probab=28.69 E-value=64 Score=22.37 Aligned_cols=43 Identities=21% Similarity=0.304 Sum_probs=31.7
Q ss_pred CCCeEEEecCCC--CcCChhHHHHHHHHHHHcCCcEEEEEcCCCC
Q 045563 210 ACPHLYLYSTGD--KVIPYQSVELLIEEQRKTGRKVFSVILGHLP 252 (271)
Q Consensus 210 ~~p~LyiYS~~D--~li~~~~Ve~~~~~~r~~G~~V~~~~f~~S~ 252 (271)
..|.|..|=+.= .-+..+++++.+++--..|..|+...|..+|
T Consensus 16 ~gPvl~vYpegvWY~~V~p~~a~rIv~~hl~~Gr~Ve~~~~~~~P 60 (64)
T COG3411 16 DGPVLVVYPEGVWYTRVDPEDARRIVQSHLLGGRPVEELIYHTGP 60 (64)
T ss_pred cCCEEEEecCCeeEeccCHHHHHHHHHHHHhCCCcchhhcccCCC
Confidence 346666665541 1246788999999888899999999998775
No 140
>KOG2029 consensus Uncharacterized conserved protein [Function unknown]
Probab=28.38 E-value=1.6e+02 Score=29.63 Aligned_cols=49 Identities=18% Similarity=0.228 Sum_probs=39.3
Q ss_pred CCCceEEEEecccchHHHHHHHHHHhcCC----CCccCCeeEEEEeCCCCCCC
Q 045563 74 GKQRCLIFHTFSNTGWFVCGSILASLQGR----EDLMQKIKGLIVDSGGAGAF 122 (271)
Q Consensus 74 ~~~~~il~H~FSnGG~~~~~~l~~~l~~~----~~~~~~i~g~I~DS~Pg~~~ 122 (271)
++.+||++=.=|+||.++=.-|++++.+. +.+..+.+|+||=|.|-...
T Consensus 523 G~~RPivwI~HSmGGLl~K~lLlda~~S~kP~ms~l~kNtrGiiFls~PHrGS 575 (697)
T KOG2029|consen 523 GDDRPIVWIGHSMGGLLAKKLLLDAYCSSKPDMSNLNKNTRGIIFLSVPHRGS 575 (697)
T ss_pred CCCCceEEEecccchHHHHHHHHHHhhcCCchhhhhhccCCceEEEecCCCCC
Confidence 35889999999999988877778888652 23567889999999997654
No 141
>PF06309 Torsin: Torsin; InterPro: IPR010448 This family consists of several eukaryotic torsin proteins. Torsion dystonia is an autosomal dominant movement disorder characterised by involuntary, repetitive muscle contractions and twisted postures. The most severe early-onset form of dystonia has been linked to mutations in the human DYT1 (TOR1A) gene encoding a protein termed torsinA. While causative genetic alterations have been identified, the function of torsin proteins and the molecular mechanism underlying dystonia remain unknown. Phylogenetic analysis of the torsin protein family indicates these proteins share distant sequence similarity with the large and diverse family of AAA ATPase, central region containing proteins () proteins. It has been suggested that torsins play a role in effectively managing protein folding and that possible breakdown in a neuroprotective mechanism that is, in part, mediated by torsins may be responsible for the neuronal dysfunction associated with dystonia [].; GO: 0005524 ATP binding, 0051085 chaperone mediated protein folding requiring cofactor
Probab=28.11 E-value=1.3e+02 Score=23.90 Aligned_cols=38 Identities=21% Similarity=0.385 Sum_probs=25.2
Q ss_pred HHHHHHHHHhhcccccCCCCceEE--EEecccchHHHHHHHHH
Q 045563 57 ADLSNEIVSWVSHEEQDGKQRCLI--FHTFSNTGWFVCGSILA 97 (271)
Q Consensus 57 ~~~~~~i~~~l~~~~~~~~~~~il--~H~FSnGG~~~~~~l~~ 97 (271)
+-++..|.+++... + +..|++ ||..|..|-...++|+.
T Consensus 35 ~~v~~ai~~~l~~~-~--p~KpLVlSfHG~tGtGKn~v~~liA 74 (127)
T PF06309_consen 35 EVVVNAIKGHLANP-N--PRKPLVLSFHGWTGTGKNFVSRLIA 74 (127)
T ss_pred HHHHHHHHHHHcCC-C--CCCCEEEEeecCCCCcHHHHHHHHH
Confidence 44556666666443 2 355565 99999999988777743
No 142
>cd01452 VWA_26S_proteasome_subunit 26S proteasome plays a major role in eukaryotic protein breakdown, especially for ubiquitin-tagged proteins. It is an ATP-dependent protease responsible for the bulk of non-lysosomal proteolysis in eukaryotes, often using covalent modification of proteins by ubiquitylation. It consists of a 20S proteolytic core particle (CP) and a 19S regulatory particle (RP). The CP is an ATP independent peptidase consisting of hydrolyzing activities. One or both ends of CP carry the RP that confers both ubiquitin and ATP dependence to the 26S proteosome. The RP's proposed functions include recognition of substrates and translocation of these to CP for proteolysis. The RP can dissociate into a stable lid and base subcomplexes. The base is composed of three non-ATPase subunits (Rpn 1, 2 and 10). A single residue in the vWA domain of Rpn10 has been implicated to be responsible for stabilizing the lid-base association.
Probab=27.62 E-value=3.7e+02 Score=22.58 Aligned_cols=39 Identities=10% Similarity=0.095 Sum_probs=29.0
Q ss_pred eEEEecCCCCcCChhHHHHHHHHHHHcCCcEEEEEcCCC
Q 045563 213 HLYLYSTGDKVIPYQSVELLIEEQRKTGRKVFSVILGHL 251 (271)
Q Consensus 213 ~LyiYS~~D~li~~~~Ve~~~~~~r~~G~~V~~~~f~~S 251 (271)
+..++-.+|--+..+++.+-+++.++.|+.|+...|.+-
T Consensus 109 rivi~v~S~~~~d~~~i~~~~~~lkk~~I~v~vI~~G~~ 147 (187)
T cd01452 109 RIVAFVGSPIEEDEKDLVKLAKRLKKNNVSVDIINFGEI 147 (187)
T ss_pred eEEEEEecCCcCCHHHHHHHHHHHHHcCCeEEEEEeCCC
Confidence 533333334336788899999999999999999999744
No 143
>KOG2624 consensus Triglyceride lipase-cholesterol esterase [Lipid transport and metabolism]
Probab=27.33 E-value=67 Score=30.57 Aligned_cols=32 Identities=16% Similarity=0.153 Sum_probs=28.1
Q ss_pred CCCeEEEecCCCCcCChhHHHHHHHHHHHcCC
Q 045563 210 ACPHLYLYSTGDKVIPYQSVELLIEEQRKTGR 241 (271)
Q Consensus 210 ~~p~LyiYS~~D~li~~~~Ve~~~~~~r~~G~ 241 (271)
.+|....||++|.++..+||+.+.........
T Consensus 332 ~~P~~l~~g~~D~l~~~~DV~~~~~~~~~~~~ 363 (403)
T KOG2624|consen 332 KVPTALYYGDNDWLADPEDVLILLLVLPNSVI 363 (403)
T ss_pred ccCEEEEecCCcccCCHHHHHHHHHhcccccc
Confidence 78999999999999999999999887766543
No 144
>PF01764 Lipase_3: Lipase (class 3); InterPro: IPR002921 Triglyceride lipases are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. This family of lipases have been called Class 3 as they are not closely related to other lipase families.; GO: 0004806 triglyceride lipase activity, 0006629 lipid metabolic process; PDB: 1LGY_A 1DTE_A 1DT5_F 4DYH_B 1DU4_C 4EA6_B 1GT6_B 1EIN_A 1DT3_A 1TIB_A ....
Probab=26.66 E-value=2.9e+02 Score=20.94 Aligned_cols=59 Identities=7% Similarity=0.013 Sum_probs=32.8
Q ss_pred HHHHHHHHHhhcccccCCCCceEEEEecccchHHHHHHHHHHhcCCCCccCCeeEEEEeCCCC
Q 045563 57 ADLSNEIVSWVSHEEQDGKQRCLIFHTFSNTGWFVCGSILASLQGREDLMQKIKGLIVDSGGA 119 (271)
Q Consensus 57 ~~~~~~i~~~l~~~~~~~~~~~il~H~FSnGG~~~~~~l~~~l~~~~~~~~~i~g~I~DS~Pg 119 (271)
..+.+.|.++.++. +..+|++-.-|-||+...-.-+...+........++.+.|-+.+.
T Consensus 48 ~~~~~~l~~~~~~~----~~~~i~itGHSLGGalA~l~a~~l~~~~~~~~~~~~~~~fg~P~~ 106 (140)
T PF01764_consen 48 DQILDALKELVEKY----PDYSIVITGHSLGGALASLAAADLASHGPSSSSNVKCYTFGAPRV 106 (140)
T ss_dssp HHHHHHHHHHHHHS----TTSEEEEEEETHHHHHHHHHHHHHHHCTTTSTTTEEEEEES-S--
T ss_pred HHHHHHHHHHHhcc----cCccchhhccchHHHHHHHHHHhhhhcccccccceeeeecCCccc
Confidence 34455555544333 257999999999997544333333332333245777788854444
No 145
>cd01462 VWA_YIEM_type VWA YIEM type: Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF). Typically, the vWA domain is made up of approximately 200 amino acid residues folded into a classic a/b para-rossmann type of fold. The vWA domain, since its discovery, has drawn great interest because of its widespread occurrence and its involvement in a wide variety of important cellular functions. These include basal membrane formation, cell migration, cell differentiation, adhesion, haemostasis, signaling, chromosomal stability, malignant transformation and in immune defenses In integrins these domains form heterodimers while in vWF it forms multimers. There are different interaction surfaces of this domain as seen by the various molecules it complexes with. Ligand binding in most cases is mediated by the presence of a metal ion dependent adhesion site termed as the MIDAS motif that is a characteristic feature of most, if
Probab=26.00 E-value=3.1e+02 Score=21.22 Aligned_cols=42 Identities=14% Similarity=0.204 Sum_probs=32.0
Q ss_pred CCeEEEecCC-CCcCChhHHHHHHHHHHHcCCcEEEEEcCCCCC
Q 045563 211 CPHLYLYSTG-DKVIPYQSVELLIEEQRKTGRKVFSVILGHLPT 253 (271)
Q Consensus 211 ~p~LyiYS~~-D~li~~~~Ve~~~~~~r~~G~~V~~~~f~~S~H 253 (271)
...+++.|+. |.-.+.+-+ +.++.+++.+..|...-+..|.+
T Consensus 95 ~~~ivliTDG~~~~~~~~~~-~~~~~~~~~~~~v~~~~~g~~~~ 137 (152)
T cd01462 95 KADIVLITDGYEGGVSDELL-REVELKRSRVARFVALALGDHGN 137 (152)
T ss_pred CceEEEECCCCCCCCCHHHH-HHHHHHHhcCcEEEEEEecCCCC
Confidence 4689999999 665555444 66667777788999999988766
No 146
>PRK05371 x-prolyl-dipeptidyl aminopeptidase; Provisional
Probab=25.15 E-value=1.8e+02 Score=30.18 Aligned_cols=45 Identities=9% Similarity=-0.081 Sum_probs=38.3
Q ss_pred CCCCCeEEEecCCCCcCChhHHHHHHHHHHHcCCcEEEEEcCCCCC
Q 045563 208 PPACPHLYLYSTGDKVIPYQSVELLIEEQRKTGRKVFSVILGHLPT 253 (271)
Q Consensus 208 ~~~~p~LyiYS~~D~li~~~~Ve~~~~~~r~~G~~V~~~~f~~S~H 253 (271)
...+|.|++.|..|..++.+...+..+..+++|.+.+.... ...|
T Consensus 453 kIkvPvLlIhGw~D~~V~~~~s~~ly~aL~~~g~pkkL~l~-~g~H 497 (767)
T PRK05371 453 KIKASVLVVHGLNDWNVKPKQVYQWWDALPENGVPKKLFLH-QGGH 497 (767)
T ss_pred CCCCCEEEEeeCCCCCCChHHHHHHHHHHHhcCCCeEEEEe-CCCc
Confidence 45799999999999999999999999999998988877554 4567
No 147
>cd00741 Lipase Lipase. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation", the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=24.75 E-value=2.2e+02 Score=22.26 Aligned_cols=45 Identities=16% Similarity=0.079 Sum_probs=27.5
Q ss_pred CCceEEEEecccchHHHHHHHHHHhcCCCCccCCeeEEEEeCCCCCC
Q 045563 75 KQRCLIFHTFSNTGWFVCGSILASLQGREDLMQKIKGLIVDSGGAGA 121 (271)
Q Consensus 75 ~~~~il~H~FSnGG~~~~~~l~~~l~~~~~~~~~i~g~I~DS~Pg~~ 121 (271)
+...|++=.+|.||.... -+...+.+.. ....++.+.||+.+...
T Consensus 26 p~~~i~v~GHSlGg~lA~-l~a~~~~~~~-~~~~~~~~~fg~p~~~~ 70 (153)
T cd00741 26 PDYKIHVTGHSLGGALAG-LAGLDLRGRG-LGRLVRVYTFGPPRVGN 70 (153)
T ss_pred CCCeEEEEEcCHHHHHHH-HHHHHHHhcc-CCCceEEEEeCCCcccc
Confidence 367999999999996443 2222232211 22456788888665543
No 148
>KOG1515 consensus Arylacetamide deacetylase [Defense mechanisms]
Probab=24.41 E-value=1.4e+02 Score=27.63 Aligned_cols=48 Identities=15% Similarity=0.011 Sum_probs=37.2
Q ss_pred CCC-eEEEecCCCCcCChhHHHHHHHHHHHcCCcEEEEEcCCCCCCCCcCCcccccccc
Q 045563 210 ACP-HLYLYSTGDKVIPYQSVELLIEEQRKTGRKVFSVILGHLPTWITSGLSPADTYRS 267 (271)
Q Consensus 210 ~~p-~LyiYS~~D~li~~~~Ve~~~~~~r~~G~~V~~~~f~~S~H~~~~~~~~v~H~r~ 267 (271)
..| .|.+-...|.+. ++=-.+++..|+.|++|+...+++..| +.|...
T Consensus 267 ~lp~tlv~~ag~D~L~--D~~~~Y~~~Lkk~Gv~v~~~~~e~~~H--------~~~~~~ 315 (336)
T KOG1515|consen 267 GLPPTLVVVAGYDVLR--DEGLAYAEKLKKAGVEVTLIHYEDGFH--------GFHILD 315 (336)
T ss_pred CCCceEEEEeCchhhh--hhhHHHHHHHHHcCCeEEEEEECCCee--------EEEecC
Confidence 344 566666677766 455678888899999999889999999 888754
No 149
>KOG1553 consensus Predicted alpha/beta hydrolase BAT5 [General function prediction only]
Probab=23.89 E-value=1.2e+02 Score=28.49 Aligned_cols=38 Identities=18% Similarity=0.264 Sum_probs=26.4
Q ss_pred CCceEEEEecccchHHHHHHHHHHhcCCCCccCCeeEEEEeCCCCC
Q 045563 75 KQRCLIFHTFSNTGWFVCGSILASLQGREDLMQKIKGLIVDSGGAG 120 (271)
Q Consensus 75 ~~~~il~H~FSnGG~~~~~~l~~~l~~~~~~~~~i~g~I~DS~Pg~ 120 (271)
+..-|++-..|.||..+ ...... -+.+||+|+|-+=+.
T Consensus 309 ~~edIilygWSIGGF~~-~waAs~-------YPdVkavvLDAtFDD 346 (517)
T KOG1553|consen 309 RQEDIILYGWSIGGFPV-AWAASN-------YPDVKAVVLDATFDD 346 (517)
T ss_pred CccceEEEEeecCCchH-HHHhhc-------CCCceEEEeecchhh
Confidence 46689999999999533 332222 257889999976554
No 150
>KOG3325 consensus Membrane coat complex Retromer, subunit VPS29/PEP11 [Intracellular trafficking, secretion, and vesicular transport]
Probab=23.80 E-value=49 Score=27.13 Aligned_cols=28 Identities=25% Similarity=0.313 Sum_probs=24.8
Q ss_pred EecCCCCcCChhHHHHHHHHHHHcCCcE
Q 045563 216 LYSTGDKVIPYQSVELLIEEQRKTGRKV 243 (271)
Q Consensus 216 iYS~~D~li~~~~Ve~~~~~~r~~G~~V 243 (271)
=|+..-.+|||.|-|..+-.+|+.+.++
T Consensus 83 G~chGhqViP~gd~~sL~~LaRqldvDI 110 (183)
T KOG3325|consen 83 GLCHGHQVIPWGDPESLALLARQLDVDI 110 (183)
T ss_pred EeecCcEeecCCCHHHHHHHHHhcCCcE
Confidence 3778889999999999999999987765
No 151
>KOG2825 consensus Putative arsenite-translocating ATPase [Inorganic ion transport and metabolism]
Probab=23.78 E-value=5.5e+02 Score=23.24 Aligned_cols=40 Identities=18% Similarity=0.189 Sum_probs=24.9
Q ss_pred eEEEecCCCCcCChhHHHHHHHHHHHcCCcE-----EEEEcCCCCC
Q 045563 213 HLYLYSTGDKVIPYQSVELLIEEQRKTGRKV-----FSVILGHLPT 253 (271)
Q Consensus 213 ~LyiYS~~D~li~~~~Ve~~~~~~r~~G~~V-----~~~~f~~S~H 253 (271)
....-+-++-+.-| +-|+++++..+.|+++ ....|.++.|
T Consensus 226 tFVcVcI~eflsly-EteRliqeL~k~~idthnIIVNQLL~~~~~~ 270 (323)
T KOG2825|consen 226 TFVCVCIAEFLSLY-ETERLIQELAKQGIDTHNIIVNQLLFPDNEV 270 (323)
T ss_pred eEEEEEHHHHHhHH-HHHHHHHHHHhcCCcccceeeeeccCCCCcc
Confidence 33344444444444 5699999999988874 4555666533
No 152
>KOG2963 consensus RNA-binding protein required for 60S ribosomal subunit biogenesis [Translation, ribosomal structure and biogenesis]
Probab=23.29 E-value=1e+02 Score=28.77 Aligned_cols=32 Identities=22% Similarity=0.253 Sum_probs=29.0
Q ss_pred CccEEEEEccCCCchHHHHHHHHHHhhCCcce
Q 045563 2 TAVTVVLLGWLGARRKHLRRYVEWYNSRGINA 33 (271)
Q Consensus 2 ~~~lVvl~gW~ga~~khl~KY~~~Y~~~g~~~ 33 (271)
.+||+||=|+.+...+|+.=-+..+|++||..
T Consensus 134 ~pPLlVmNgFg~~~~~HlkL~~t~FQNmFPsI 165 (405)
T KOG2963|consen 134 SPPLLVLNGFGTSGRKHLKLMTTMFQNMFPSI 165 (405)
T ss_pred CCCEEEEccCCCCcchhHHHHHHHHHHcCCCc
Confidence 68999999999888789999999999999976
No 153
>PF12715 Abhydrolase_7: Abhydrolase family; PDB: 3NUZ_C 3G8Y_A.
Probab=22.94 E-value=1.4e+02 Score=28.25 Aligned_cols=49 Identities=16% Similarity=0.171 Sum_probs=29.6
Q ss_pred HHhhcccccCCCCceEEEEecccchHHHHHHHHHHhcCCCCccCCeeEEEEeCCCCCC
Q 045563 64 VSWVSHEEQDGKQRCLIFHTFSNTGWFVCGSILASLQGREDLMQKIKGLIVDSGGAGA 121 (271)
Q Consensus 64 ~~~l~~~~~~~~~~~il~H~FSnGG~~~~~~l~~~l~~~~~~~~~i~g~I~DS~Pg~~ 121 (271)
+++|+.... -++.+|-+=.||+||.-+ -++.+|. ++|++.|.=++.+.+
T Consensus 214 lDfL~slpe-VD~~RIG~~GfSmGg~~a--~~LaALD------dRIka~v~~~~l~~~ 262 (390)
T PF12715_consen 214 LDFLASLPE-VDPDRIGCMGFSMGGYRA--WWLAALD------DRIKATVANGYLCTT 262 (390)
T ss_dssp HHHHCT-TT-EEEEEEEEEEEGGGHHHH--HHHHHH-------TT--EEEEES-B--H
T ss_pred HHHHhcCcc-cCccceEEEeecccHHHH--HHHHHcc------hhhHhHhhhhhhhcc
Confidence 445544332 257899999999999543 3556664 789999988887754
No 154
>COG3509 LpqC Poly(3-hydroxybutyrate) depolymerase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=22.85 E-value=1.5e+02 Score=27.15 Aligned_cols=38 Identities=16% Similarity=0.332 Sum_probs=23.8
Q ss_pred CCceEEEEecccchHHHHHHHHHHhcCCCCc---cCCeeEEE-EeC
Q 045563 75 KQRCLIFHTFSNTGWFVCGSILASLQGREDL---MQKIKGLI-VDS 116 (271)
Q Consensus 75 ~~~~il~H~FSnGG~~~~~~l~~~l~~~~~~---~~~i~g~I-~DS 116 (271)
++.+|++-.+||||. +...|+.. +.++ .-+|.|.. +|.
T Consensus 142 dp~RVyvtGlS~GG~-Ma~~lac~---~p~~faa~A~VAg~~~~~~ 183 (312)
T COG3509 142 DPARVYVTGLSNGGR-MANRLACE---YPDIFAAIAPVAGLLALGV 183 (312)
T ss_pred CcceEEEEeeCcHHH-HHHHHHhc---CcccccceeeeecccCCCc
Confidence 477999999999995 44444333 3322 23555666 555
No 155
>PF12834 Phage_int_SAM_2: Phage integrase, N-terminal; InterPro: IPR024457 Phage integrase proteins cleave DNA substrates by a series of staggered cuts, during which the protein becomes covalently linked to the DNA through a catalytic tyrosine residue at the carboxy end of the alignment [, ]. This entry represents the N-terminal predicted alpha-helical domain found in a family of putative prophage DNA-binding integrases.
Probab=22.57 E-value=72 Score=23.51 Aligned_cols=22 Identities=23% Similarity=0.487 Sum_probs=17.8
Q ss_pred cCCCchHHHHHHHHHHhhCCcc
Q 045563 11 WLGARRKHLRRYVEWYNSRGIN 32 (271)
Q Consensus 11 W~ga~~khl~KY~~~Y~~~g~~ 32 (271)
|-.=+++||..|++.|++.|.+
T Consensus 46 ~~~lk~kHI~~lv~~w~~~gis 67 (91)
T PF12834_consen 46 IRNLKPKHIEALVQHWKAQGIS 67 (91)
T ss_pred HHHhhHHHHHHHHHHHHHcCCC
Confidence 3455789999999999988844
No 156
>COG4757 Predicted alpha/beta hydrolase [General function prediction only]
Probab=22.34 E-value=5.6e+02 Score=22.85 Aligned_cols=107 Identities=16% Similarity=0.066 Sum_probs=56.8
Q ss_pred EEEEEccCCCchHHHHHHHHHHhhCCcceEEEeecccceeecccchh-hhhhHHHHHHHH---HHhhcccccCCCCceEE
Q 045563 5 TVVLLGWLGARRKHLRRYVEWYNSRGINAITFVVEAKELLSFDLGRG-VEKRIADLSNEI---VSWVSHEEQDGKQRCLI 80 (271)
Q Consensus 5 lVvl~gW~ga~~khl~KY~~~Y~~~g~~~l~~~~~~~~~~~~~~g~~-~~~~~~~~~~~i---~~~l~~~~~~~~~~~il 80 (271)
.+++-+=.|-......++++.=.+.||+++++.-+...--.+...++ ..+-.+=...++ ++.++.. ....|.+
T Consensus 32 ~~~va~a~Gv~~~fYRrfA~~a~~~Gf~Vlt~dyRG~g~S~p~~~~~~~~~~~DwA~~D~~aal~~~~~~---~~~~P~y 108 (281)
T COG4757 32 RLVVAGATGVGQYFYRRFAAAAAKAGFEVLTFDYRGIGQSRPASLSGSQWRYLDWARLDFPAALAALKKA---LPGHPLY 108 (281)
T ss_pred cEEecccCCcchhHhHHHHHHhhccCceEEEEecccccCCCccccccCccchhhhhhcchHHHHHHHHhh---CCCCceE
Confidence 44554545777788899999999999999998755432111111000 001111111111 2223221 2367888
Q ss_pred EEecccchHHHHHHHHHHhcCCCCccCCeeEEEEeCCCCCCC
Q 045563 81 FHTFSNTGWFVCGSILASLQGREDLMQKIKGLIVDSGGAGAF 122 (271)
Q Consensus 81 ~H~FSnGG~~~~~~l~~~l~~~~~~~~~i~g~I~DS~Pg~~~ 122 (271)
+=.=|.||- ++-++-+... ---.+||-|.+|...
T Consensus 109 ~vgHS~GGq-----a~gL~~~~~k---~~a~~vfG~gagwsg 142 (281)
T COG4757 109 FVGHSFGGQ-----ALGLLGQHPK---YAAFAVFGSGAGWSG 142 (281)
T ss_pred Eeeccccce-----eecccccCcc---cceeeEecccccccc
Confidence 888888982 2233322221 123578989888543
No 157
>PF07485 DUF1529: Domain of Unknown Function (DUF1259); InterPro: IPR011094 This family is the lppY/lpqO homologue family. They are related to 'probable conserved lipoproteins' LppY and LpqO from Mycobacterium bovis.
Probab=22.19 E-value=1.1e+02 Score=24.15 Aligned_cols=35 Identities=31% Similarity=0.352 Sum_probs=28.5
Q ss_pred CCCCcCChhHHHHHHHHHHHcCCcEEEEE---cCCCCC
Q 045563 219 TGDKVIPYQSVELLIEEQRKTGRKVFSVI---LGHLPT 253 (271)
Q Consensus 219 ~~D~li~~~~Ve~~~~~~r~~G~~V~~~~---f~~S~H 253 (271)
..|.++-.++|+.+++..++.|+.|.... +.+.|+
T Consensus 60 ~Gd~vll~~EV~pvi~aL~~~GI~vtAlHNH~l~e~Pr 97 (123)
T PF07485_consen 60 MGDFVLLEDEVNPVISALRKNGIEVTALHNHWLFEQPR 97 (123)
T ss_pred eecEEecHHHHHHHHHHHHHCCceEEEEecccccCCCC
Confidence 37899999999999999999999986543 555555
No 158
>PF07819 PGAP1: PGAP1-like protein; InterPro: IPR012908 The sequences found in this family are similar to PGAP1 (Q765A7 from SWISSPROT). This is an endoplasmic reticulum membrane protein with a catalytic serine-containing motif that is conserved in a number of lipases. PGAP1 functions as a GPI inositol-deacylase; this deacylation is important for the efficient transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi body [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006505 GPI anchor metabolic process, 0006886 intracellular protein transport, 0031227 intrinsic to endoplasmic reticulum membrane
Probab=21.62 E-value=5.2e+02 Score=22.12 Aligned_cols=63 Identities=17% Similarity=0.099 Sum_probs=37.4
Q ss_pred hhHHHHHHHHHHhhcccccCCCCceEEEEecccchHHHHHHHHHHhcCCCCccCCeeEEEEeCCCCCCC
Q 045563 54 KRIADLSNEIVSWVSHEEQDGKQRCLIFHTFSNTGWFVCGSILASLQGREDLMQKIKGLIVDSGGAGAF 122 (271)
Q Consensus 54 ~~~~~~~~~i~~~l~~~~~~~~~~~il~H~FSnGG~~~~~~l~~~l~~~~~~~~~i~g~I~DS~Pg~~~ 122 (271)
..+...++.|++..... .....+|++=+=|+||. ....++.. .......++++|+=++|-...
T Consensus 64 ~~~~~~i~~i~~~~~~~--~~~~~~vilVgHSmGGl-var~~l~~---~~~~~~~v~~iitl~tPh~g~ 126 (225)
T PF07819_consen 64 EFLAEAIKYILELYKSN--RPPPRSVILVGHSMGGL-VARSALSL---PNYDPDSVKTIITLGTPHRGS 126 (225)
T ss_pred HHHHHHHHHHHHhhhhc--cCCCCceEEEEEchhhH-HHHHHHhc---cccccccEEEEEEEcCCCCCc
Confidence 34445555555444222 23477899999999995 43333322 122225789999988887653
No 159
>PF11055 Gsf2: Glucose signalling factor 2; InterPro: IPR022757 This entry represents fungal Glucose singalling factor 2. Gsf2 is localised to the ER and functions to promote the secretion of certain hexose transporters [].
Probab=21.10 E-value=55 Score=30.52 Aligned_cols=21 Identities=43% Similarity=0.797 Sum_probs=18.7
Q ss_pred EEEccCCCchHHHHHHHHHHh
Q 045563 7 VLLGWLGARRKHLRRYVEWYN 27 (271)
Q Consensus 7 vl~gW~ga~~khl~KY~~~Y~ 27 (271)
+=+||.||+..-..-|.+-|+
T Consensus 230 ~siGWtGaRrat~DeYk~~Yr 250 (377)
T PF11055_consen 230 RSIGWTGARRATYDEYKENYR 250 (377)
T ss_pred HHcCCcccccCCHHHHHHHHH
Confidence 347999999999999999887
No 160
>cd00394 Clp_protease_like Caseinolytic protease (ClpP) is an ATP-dependent protease. Clp protease (caseinolytic protease; ClpP; endopeptidase Clp; Peptidase S14; ATP-dependent protease, ClpAP)-like enzymes are highly conserved serine proteases and belong to the ClpP/Crotonase superfamily. Included in this family are Clp proteases that are involved in a number of cellular processes such as degradation of misfolded proteins, regulation of short-lived proteins and housekeeping removal of dysfunctional proteins. They are also implicated in the control of cell growth, targeting DNA-binding protein from starved cells. The functional Clp protease is comprised of two components: a proteolytic component and one of several regulatory ATPase components, both of which are required for effective levels of protease activity in the presence of ATP. Active site consists of the triad Ser, His and Asp, preferring hydrophobic or non-polar residues at P1 or P1' positions. The protease exists as a tetradec
Probab=21.03 E-value=1.7e+02 Score=23.34 Aligned_cols=42 Identities=10% Similarity=0.185 Sum_probs=26.6
Q ss_pred CCceEEEEecccchHHHH-HHHHHHhcCCCCccCCeeEEEEeCCCC
Q 045563 75 KQRCLIFHTFSNTGWFVC-GSILASLQGREDLMQKIKGLIVDSGGA 119 (271)
Q Consensus 75 ~~~~il~H~FSnGG~~~~-~~l~~~l~~~~~~~~~i~g~I~DS~Pg 119 (271)
+...|++...|.||.... ..|.+.+++. ..|+.+.+-..|-+
T Consensus 28 ~~~~ivl~~~s~Gg~~~~~~~i~~~l~~~---~kpvva~~~g~~~s 70 (161)
T cd00394 28 SVKAIVLEVNTPGGRVDAGMNIVDALQAS---RKPVIAYVGGQAAS 70 (161)
T ss_pred CCceEEEEEECCCcCHHHHHHHHHHHHHh---CCCEEEEECChhHH
Confidence 467999999999886543 3345555432 25777776644443
No 161
>PF10678 DUF2492: Protein of unknown function (DUF2492); InterPro: IPR019620 This entry describes a family of small cytosolic proteins, about 80 amino acids in length, in which the eight invariant residues include three His residues and two Cys residues. Two pairs of these invariant residues occur in motifs HxH (where x is A or G) and CxH, both of which suggest metal-binding activity. This protein family was identified by searching with a phylogenetic profile based on an anaerobic sulphatase-maturase enzyme, which contains multiple 4Fe-4S clusters. The linkages by phylogenetic profiling and by iron-sulphur cluster-related motifs together suggest this protein may be an accessory protein to certain maturases in sulphatase/maturase systems.
Probab=20.94 E-value=76 Score=22.93 Aligned_cols=37 Identities=24% Similarity=0.399 Sum_probs=27.2
Q ss_pred eEEEEecccchHHHHHHHHHHhcCCCCccCCeeEEEEe
Q 045563 78 CLIFHTFSNTGWFVCGSILASLQGREDLMQKIKGLIVD 115 (271)
Q Consensus 78 ~il~H~FSnGG~~~~~~l~~~l~~~~~~~~~i~g~I~D 115 (271)
..-||+-|..| +.+..|++.|.+++.+...-.|+..|
T Consensus 36 ~arFhTCSae~-m~a~eLv~FL~~rgKfi~~~~g~t~~ 72 (78)
T PF10678_consen 36 DARFHTCSAEG-MTADELVDFLEERGKFIPSDDGFTVN 72 (78)
T ss_pred CceEEecCCCC-CCHHHHHHHHHHcCCEeecCCCEEEc
Confidence 44589999999 78999999998877665433444444
No 162
>PLN02606 palmitoyl-protein thioesterase
Probab=20.56 E-value=6.6e+02 Score=22.99 Aligned_cols=104 Identities=9% Similarity=0.098 Sum_probs=50.1
Q ss_pred CccEEEEEccCC-CchHHHHHHHHHHhhC-CcceEEEeecccceeeccc-chhhhhhHHHHHHHHHHhhcccccCCCCce
Q 045563 2 TAVTVVLLGWLG-ARRKHLRRYVEWYNSR-GINAITFVVEAKELLSFDL-GRGVEKRIADLSNEIVSWVSHEEQDGKQRC 78 (271)
Q Consensus 2 ~~~lVvl~gW~g-a~~khl~KY~~~Y~~~-g~~~l~~~~~~~~~~~~~~-g~~~~~~~~~~~~~i~~~l~~~~~~~~~~~ 78 (271)
+.|+||+.|=.+ |...-+.+..++-++. |.-..++.... + ...++ + .....++.+.+.|.+ .++. +..
T Consensus 26 ~~PvViwHGlgD~~~~~~~~~~~~~i~~~~~~pg~~v~ig~-~-~~~s~~~-~~~~Qv~~vce~l~~-~~~L-----~~G 96 (306)
T PLN02606 26 SVPFVLFHGFGGECSNGKVSNLTQFLINHSGYPGTCVEIGN-G-VQDSLFM-PLRQQASIACEKIKQ-MKEL-----SEG 96 (306)
T ss_pred CCCEEEECCCCcccCCchHHHHHHHHHhCCCCCeEEEEECC-C-ccccccc-CHHHHHHHHHHHHhc-chhh-----cCc
Confidence 579999999652 3333444444444422 33333333221 1 11111 1 233455666666554 2221 346
Q ss_pred EEEEecccchHHHHHHHHHHhcCCCCccCCeeEEEEeCCCC
Q 045563 79 LIFHTFSNTGWFVCGSILASLQGREDLMQKIKGLIVDSGGA 119 (271)
Q Consensus 79 il~H~FSnGG~~~~~~l~~~l~~~~~~~~~i~g~I~DS~Pg 119 (271)
+-+=.||=||- .+..+++... . .+|++-+|-=++|-
T Consensus 97 ~naIGfSQGgl-flRa~ierc~---~-~p~V~nlISlggph 132 (306)
T PLN02606 97 YNIVAESQGNL-VARGLIEFCD---N-APPVINYVSLGGPH 132 (306)
T ss_pred eEEEEEcchhH-HHHHHHHHCC---C-CCCcceEEEecCCc
Confidence 77778999994 4445544432 1 13555555444443
No 163
>PF11032 ApoM: Apolipoprotein M (ApoM); InterPro: IPR022734 ApoM is a 25 kDa plasma protein associated with high-density lipoproteins (HDLs). ApoM is important in the formation of pre-ss-HDL and also in increasing cholesterol efflux from macrophage foam cells []. Lipoproteins consist of lipids solubilized by apolipoproteins. ApoM lacks an external amphipathic motif and is uniquely secreted to plasma without cleavage of its terminal signal peptide []. ; PDB: 2XKL_A 2WEX_A 2YG2_B 2WEW_A.
Probab=20.33 E-value=1.9e+02 Score=24.48 Aligned_cols=32 Identities=22% Similarity=0.267 Sum_probs=24.3
Q ss_pred CCCeEEEecCCCCcCChhHHHHHHHHHHHcCCc
Q 045563 210 ACPHLYLYSTGDKVIPYQSVELLIEEQRKTGRK 242 (271)
Q Consensus 210 ~~p~LyiYS~~D~li~~~~Ve~~~~~~r~~G~~ 242 (271)
...|++|||+. +-++.+.+|+|-+.++-.|++
T Consensus 140 ~~~rllLysR~-~~~~~~~lEeFk~q~~Cl~~~ 171 (186)
T PF11032_consen 140 SYQRLLLYSRS-PKLEEEELEEFKAQTECLGFK 171 (186)
T ss_dssp TEEEEEEEESS-SS--HHHHHHHHHHHHHTT--
T ss_pred CceEEEEEeCC-CCCCHHHHHHHHHhhhccCcE
Confidence 45689999986 557889999999999999988
No 164
>KOG1454 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=20.28 E-value=2.2e+02 Score=26.02 Aligned_cols=80 Identities=11% Similarity=0.006 Sum_probs=43.7
Q ss_pred CccEEEEEccCCCchHHHHHHHHHHhhCCcc----eEEEeecccceeecc-cchhhhhhHHHHHHHHHHhhcccccCCCC
Q 045563 2 TAVTVVLLGWLGARRKHLRRYVEWYNSRGIN----AITFVVEAKELLSFD-LGRGVEKRIADLSNEIVSWVSHEEQDGKQ 76 (271)
Q Consensus 2 ~~~lVvl~gW~ga~~khl~KY~~~Y~~~g~~----~l~~~~~~~~~~~~~-~g~~~~~~~~~~~~~i~~~l~~~~~~~~~ 76 (271)
.+|++++.||.++. .-|....-.+..+ ++.+..+..-...+. .+. .=.+...++.|.+.+.+.. .
T Consensus 58 ~~pvlllHGF~~~~----~~w~~~~~~L~~~~~~~v~aiDl~G~g~~s~~~~~~--~y~~~~~v~~i~~~~~~~~----~ 127 (326)
T KOG1454|consen 58 KPPVLLLHGFGASS----FSWRRVVPLLSKAKGLRVLAIDLPGHGYSSPLPRGP--LYTLRELVELIRRFVKEVF----V 127 (326)
T ss_pred CCcEEEeccccCCc----ccHhhhccccccccceEEEEEecCCCCcCCCCCCCC--ceehhHHHHHHHHHHHhhc----C
Confidence 57999999999743 3344444444444 344443332111111 111 0123455666666665543 3
Q ss_pred ceEEEEecccchHHH
Q 045563 77 RCLIFHTFSNTGWFV 91 (271)
Q Consensus 77 ~~il~H~FSnGG~~~ 91 (271)
.++.+=+.|.||...
T Consensus 128 ~~~~lvghS~Gg~va 142 (326)
T KOG1454|consen 128 EPVSLVGHSLGGIVA 142 (326)
T ss_pred cceEEEEeCcHHHHH
Confidence 358899999999543
No 165
>COG0041 PurE Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase [Nucleotide transport and metabolism]
Probab=20.20 E-value=1.3e+02 Score=24.80 Aligned_cols=28 Identities=21% Similarity=0.121 Sum_probs=24.6
Q ss_pred hhHHHHHHHHHHHcCCcEEEEEcCCCCC
Q 045563 226 YQSVELLIEEQRKTGRKVFSVILGHLPT 253 (271)
Q Consensus 226 ~~~Ve~~~~~~r~~G~~V~~~~f~~S~H 253 (271)
++.+.+++++++++|++|.--.=.++.|
T Consensus 43 Pe~m~~ya~~a~~~g~~viIAgAGgAAH 70 (162)
T COG0041 43 PEKMFEYAEEAEERGVKVIIAGAGGAAH 70 (162)
T ss_pred HHHHHHHHHHHHHCCCeEEEecCcchhh
Confidence 5789999999999999998877788888
Done!