Query 045564
Match_columns 296
No_of_seqs 245 out of 1758
Neff 7.8
Searched_HMMs 46136
Date Fri Mar 29 03:21:04 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/045564.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/045564hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1237 H+/oligopeptide sympor 100.0 1.2E-27 2.7E-32 236.5 19.7 243 35-277 16-283 (571)
2 COG3104 PTR2 Dipeptide/tripept 100.0 5.2E-28 1.1E-32 230.9 14.3 187 49-256 16-210 (498)
3 PRK10207 dipeptide/tripeptide 99.9 6.2E-25 1.3E-29 215.0 20.4 184 49-254 9-196 (489)
4 PRK15462 dipeptide/tripeptide 99.9 4E-23 8.7E-28 201.5 20.3 184 50-255 5-192 (493)
5 TIGR00924 yjdL_sub1_fam amino 99.9 1.9E-22 4.1E-27 196.8 19.9 184 49-255 5-195 (475)
6 TIGR00926 2A1704 Peptide:H+ sy 99.9 5.2E-22 1.1E-26 199.6 19.8 188 66-268 2-211 (654)
7 PRK09584 tppB putative tripept 99.9 8.8E-22 1.9E-26 193.2 19.9 181 49-251 16-200 (500)
8 PRK14995 methyl viologen resis 99.8 8.1E-17 1.8E-21 157.6 20.9 172 53-248 5-178 (495)
9 TIGR02332 HpaX 4-hydroxyphenyl 99.7 2.4E-16 5.2E-21 150.8 20.4 168 52-244 6-181 (412)
10 PRK03545 putative arabinose tr 99.7 2.9E-16 6.3E-21 148.5 19.9 170 52-247 7-179 (390)
11 TIGR00891 2A0112 putative sial 99.7 1.1E-15 2.3E-20 143.4 21.5 172 50-246 8-183 (405)
12 PRK10213 nepI ribonucleoside t 99.7 8.7E-16 1.9E-20 146.1 21.1 172 49-246 15-189 (394)
13 PRK10054 putative transporter; 99.7 7.9E-16 1.7E-20 146.4 20.3 170 52-247 5-177 (395)
14 PF00854 PTR2: POT family; In 99.7 6.9E-17 1.5E-21 152.6 10.9 144 118-275 1-161 (372)
15 TIGR00711 efflux_EmrB drug res 99.7 9.4E-16 2E-20 148.2 18.5 155 68-247 18-172 (485)
16 PRK10504 putative transporter; 99.7 1.8E-15 4E-20 146.3 20.5 169 55-249 11-182 (471)
17 KOG1330 Sugar transporter/spin 99.7 2.3E-17 5E-22 156.5 6.7 173 50-247 29-204 (493)
18 PF07690 MFS_1: Major Facilita 99.7 1.8E-15 3.9E-20 139.0 19.2 152 71-247 16-167 (352)
19 PRK05122 major facilitator sup 99.7 1.4E-15 3E-20 143.9 18.7 176 53-245 14-192 (399)
20 PRK12307 putative sialic acid 99.7 2.4E-15 5.2E-20 143.3 20.5 167 51-242 15-183 (426)
21 PRK11551 putative 3-hydroxyphe 99.7 3.2E-15 7E-20 141.5 20.4 171 50-246 11-184 (406)
22 PRK12382 putative transporter; 99.7 3.3E-15 7.1E-20 141.1 20.3 172 53-241 14-188 (392)
23 PRK03893 putative sialic acid 99.7 3.7E-15 8E-20 144.9 21.2 168 51-243 17-186 (496)
24 TIGR00710 efflux_Bcr_CflA drug 99.7 2.9E-15 6.3E-20 139.9 19.6 150 74-248 27-176 (385)
25 COG2814 AraJ Arabinose efflux 99.7 4.5E-15 9.7E-20 140.3 20.7 178 50-253 9-189 (394)
26 TIGR00895 2A0115 benzoate tran 99.7 2.3E-15 4.9E-20 140.4 18.2 169 52-245 15-185 (398)
27 PRK11646 multidrug resistance 99.7 5.1E-15 1.1E-19 141.1 20.6 156 65-246 23-179 (400)
28 TIGR01299 synapt_SV2 synaptic 99.7 3.2E-15 6.8E-20 152.6 20.0 162 70-256 185-361 (742)
29 PRK10091 MFS transport protein 99.7 4E-15 8.6E-20 140.6 19.3 150 73-247 24-173 (382)
30 PRK15403 multidrug efflux syst 99.7 4.9E-15 1.1E-19 141.9 19.5 146 77-247 41-186 (413)
31 TIGR00879 SP MFS transporter, 99.7 2.4E-15 5.3E-20 143.1 17.1 149 77-247 53-212 (481)
32 PRK11652 emrD multidrug resist 99.7 8.3E-15 1.8E-19 138.5 20.1 169 51-244 5-175 (394)
33 TIGR00900 2A0121 H+ Antiporter 99.7 7E-15 1.5E-19 135.6 19.0 155 72-247 20-174 (365)
34 TIGR00893 2A0114 d-galactonate 99.7 3.2E-15 6.9E-20 138.4 16.4 151 72-247 14-164 (399)
35 TIGR00903 2A0129 major facilit 99.7 8.5E-15 1.8E-19 138.5 19.0 150 70-245 9-158 (368)
36 TIGR00890 2A0111 Oxalate/Forma 99.6 6.6E-15 1.4E-19 136.1 17.7 168 53-247 3-172 (377)
37 PRK10077 xylE D-xylose transpo 99.6 9.5E-15 2.1E-19 141.2 19.4 151 83-246 51-209 (479)
38 PRK10406 alpha-ketoglutarate t 99.6 2.2E-14 4.8E-19 137.8 21.5 159 70-245 40-212 (432)
39 PRK11663 regulatory protein Uh 99.6 1.4E-14 3E-19 139.5 19.7 147 72-244 44-190 (434)
40 PRK03699 putative transporter; 99.6 2.8E-14 6E-19 135.4 21.3 171 51-246 4-177 (394)
41 PRK15402 multidrug efflux syst 99.6 1.9E-14 4.1E-19 136.7 19.5 146 77-247 38-183 (406)
42 PRK11043 putative transporter; 99.6 3.7E-14 8E-19 134.3 21.2 158 66-248 18-177 (401)
43 PRK09705 cynX putative cyanate 99.6 2.5E-14 5.3E-19 136.0 19.4 152 66-244 24-176 (393)
44 PRK10473 multidrug efflux syst 99.6 3.9E-14 8.4E-19 133.8 20.5 148 75-247 26-173 (392)
45 TIGR00886 2A0108 nitrite extru 99.6 4.9E-14 1.1E-18 131.0 19.5 146 66-236 16-171 (366)
46 PRK10642 proline/glycine betai 99.6 6.2E-14 1.3E-18 137.1 20.5 164 66-246 30-207 (490)
47 cd06174 MFS The Major Facilita 99.6 5.3E-14 1.1E-18 128.5 18.6 157 66-248 14-170 (352)
48 PRK11102 bicyclomycin/multidru 99.6 3.2E-14 6.9E-19 133.1 17.5 151 72-248 12-162 (377)
49 TIGR00892 2A0113 monocarboxyla 99.6 3.8E-14 8.3E-19 137.5 18.5 147 76-248 43-190 (455)
50 PRK09874 drug efflux system pr 99.6 1.1E-13 2.4E-18 130.7 20.5 155 66-247 29-188 (408)
51 PLN00028 nitrate transmembrane 99.6 1.1E-13 2.3E-18 135.1 21.0 149 73-247 57-214 (476)
52 TIGR00887 2A0109 phosphate:H+ 99.6 9.6E-14 2.1E-18 136.1 19.7 155 83-256 52-231 (502)
53 TIGR00881 2A0104 phosphoglycer 99.6 1.5E-14 3.2E-19 133.8 12.9 151 72-247 15-166 (379)
54 PRK09556 uhpT sugar phosphate 99.6 1.1E-14 2.5E-19 141.3 12.1 150 74-243 51-203 (467)
55 PRK03633 putative MFS family t 99.6 2.2E-13 4.7E-18 128.6 20.0 154 52-231 4-160 (381)
56 TIGR00899 2A0120 sugar efflux 99.6 1.6E-13 3.4E-18 127.9 18.6 158 66-248 12-172 (375)
57 TIGR00897 2A0118 polyol permea 99.6 2.7E-13 5.9E-18 129.0 20.2 170 49-240 8-181 (402)
58 PRK15011 sugar efflux transpor 99.6 5.5E-13 1.2E-17 126.5 21.8 159 66-250 231-389 (393)
59 PRK11273 glpT sn-glycerol-3-ph 99.6 1.9E-13 4.1E-18 132.2 18.0 152 72-245 49-201 (452)
60 TIGR00885 fucP L-fucose:H+ sym 99.6 5.7E-13 1.2E-17 127.7 20.8 158 66-245 17-200 (410)
61 TIGR00712 glpT glycerol-3-phos 99.5 1.3E-13 2.7E-18 132.8 16.3 152 73-246 48-200 (438)
62 PRK10133 L-fucose transporter; 99.5 7.9E-13 1.7E-17 127.8 21.8 153 51-225 23-177 (438)
63 PRK15075 citrate-proton sympor 99.5 4.7E-13 1E-17 128.7 20.1 154 70-240 33-200 (434)
64 TIGR00806 rfc RFC reduced fola 99.5 5.1E-13 1.1E-17 128.9 19.9 149 72-247 46-198 (511)
65 PRK10642 proline/glycine betai 99.5 6.9E-13 1.5E-17 129.7 21.1 183 51-255 247-435 (490)
66 PRK11195 lysophospholipid tran 99.5 5.6E-13 1.2E-17 126.8 19.1 140 77-245 28-167 (393)
67 PRK15011 sugar efflux transpor 99.5 1.3E-12 2.7E-17 124.0 21.3 157 66-248 30-190 (393)
68 TIGR00896 CynX cyanate transpo 99.5 2.7E-13 5.8E-18 126.4 16.0 152 67-245 15-168 (355)
69 PRK15034 nitrate/nitrite trans 99.5 1.8E-12 3.9E-17 125.8 22.2 174 54-248 34-228 (462)
70 TIGR00805 oat sodium-independe 99.5 6.6E-14 1.4E-18 141.3 12.1 198 51-250 29-279 (633)
71 TIGR00894 2A0114euk Na(+)-depe 99.5 1.2E-13 2.6E-18 133.6 13.5 143 81-246 70-213 (465)
72 PRK10489 enterobactin exporter 99.5 2.4E-13 5.3E-18 129.6 14.8 155 73-248 39-193 (417)
73 PRK09952 shikimate transporter 99.5 2.4E-12 5.2E-17 124.2 21.2 180 51-251 247-432 (438)
74 PRK09952 shikimate transporter 99.5 2.8E-12 6.1E-17 123.7 21.4 150 76-243 47-211 (438)
75 TIGR00890 2A0111 Oxalate/Forma 99.5 1.2E-12 2.6E-17 121.0 17.9 152 70-245 224-375 (377)
76 PF06609 TRI12: Fungal trichot 99.5 5.2E-13 1.1E-17 132.7 16.3 158 72-256 64-223 (599)
77 TIGR00898 2A0119 cation transp 99.5 3.9E-13 8.4E-18 131.2 15.1 151 77-255 114-269 (505)
78 PRK09556 uhpT sugar phosphate 99.5 2.3E-12 4.9E-17 125.2 20.4 161 66-249 273-446 (467)
79 KOG0254 Predicted transporter 99.5 2E-12 4.3E-17 127.4 19.5 162 69-256 64-236 (513)
80 TIGR00899 2A0120 sugar efflux 99.5 4.6E-12 9.9E-17 118.0 20.7 156 68-249 216-371 (375)
81 COG2271 UhpC Sugar phosphate p 99.5 2.7E-13 6E-18 127.8 12.1 152 73-249 50-204 (448)
82 cd06174 MFS The Major Facilita 99.5 5.2E-12 1.1E-16 115.3 20.2 158 66-248 190-348 (352)
83 KOG0255 Synaptic vesicle trans 99.5 9.9E-13 2.2E-17 129.3 15.6 150 79-256 110-261 (521)
84 TIGR00883 2A0106 metabolite-pr 99.5 1.7E-12 3.6E-17 120.8 15.9 166 56-242 221-391 (394)
85 TIGR01299 synapt_SV2 synaptic 99.5 4.5E-12 9.7E-17 129.6 20.0 132 92-249 600-731 (742)
86 PRK09705 cynX putative cyanate 99.5 1E-11 2.2E-16 118.0 20.9 163 65-253 218-382 (393)
87 TIGR00880 2_A_01_02 Multidrug 99.4 1.6E-12 3.5E-17 103.1 12.6 132 94-250 5-136 (141)
88 PRK03699 putative transporter; 99.4 7.4E-12 1.6E-16 118.7 19.4 156 66-247 220-375 (394)
89 TIGR00889 2A0110 nucleoside tr 99.4 6E-12 1.3E-16 120.9 18.4 158 70-249 227-399 (418)
90 TIGR00882 2A0105 oligosacchari 99.4 5.6E-12 1.2E-16 119.4 17.7 162 66-247 17-178 (396)
91 PRK03893 putative sialic acid 99.4 6.6E-12 1.4E-16 122.1 18.2 150 69-241 293-442 (496)
92 TIGR00893 2A0114 d-galactonate 99.4 2.4E-11 5.2E-16 112.4 19.5 164 66-248 230-395 (399)
93 PRK08633 2-acyl-glycerophospho 99.4 1.3E-11 2.8E-16 131.7 20.0 134 72-227 30-165 (1146)
94 PRK11273 glpT sn-glycerol-3-ph 99.4 2.6E-11 5.6E-16 117.3 20.3 159 66-247 268-430 (452)
95 COG2271 UhpC Sugar phosphate p 99.4 7.1E-12 1.5E-16 118.3 15.7 175 54-250 252-432 (448)
96 PRK15075 citrate-proton sympor 99.4 2.2E-11 4.8E-16 117.1 19.3 144 66-231 253-398 (434)
97 PRK09528 lacY galactoside perm 99.4 1.3E-11 2.9E-16 117.8 17.5 165 66-250 25-189 (420)
98 PRK10489 enterobactin exporter 99.4 3.1E-11 6.8E-16 115.1 20.0 157 67-248 239-395 (417)
99 PTZ00207 hypothetical protein; 99.4 3.7E-11 8.1E-16 119.8 20.9 170 51-244 25-197 (591)
100 TIGR00891 2A0112 putative sial 99.4 1.6E-11 3.5E-16 115.0 17.3 147 66-236 253-400 (405)
101 PRK11010 ampG muropeptide tran 99.4 4.3E-11 9.3E-16 117.4 20.4 172 51-247 9-190 (491)
102 PRK05122 major facilitator sup 99.4 4.5E-11 9.7E-16 113.0 19.8 160 66-253 231-390 (399)
103 PRK03633 putative MFS family t 99.4 6.1E-11 1.3E-15 111.9 20.6 151 70-249 219-369 (381)
104 PRK03545 putative arabinose tr 99.4 7.7E-11 1.7E-15 111.4 21.3 160 66-251 220-379 (390)
105 PRK06814 acylglycerophosphoeth 99.4 2.6E-11 5.6E-16 129.7 19.7 138 87-246 52-189 (1140)
106 TIGR00901 2A0125 AmpG-related 99.4 3.5E-11 7.6E-16 112.1 18.1 155 70-247 6-173 (356)
107 TIGR00883 2A0106 metabolite-pr 99.4 3.5E-11 7.5E-16 111.9 18.1 158 73-247 14-186 (394)
108 TIGR00892 2A0113 monocarboxyla 99.4 1.7E-11 3.7E-16 118.9 16.6 161 66-251 256-420 (455)
109 PRK12382 putative transporter; 99.4 3.3E-11 7.1E-16 113.8 18.1 157 66-250 231-387 (392)
110 COG2223 NarK Nitrate/nitrite t 99.4 2.6E-11 5.7E-16 114.4 16.6 181 49-253 9-194 (417)
111 PRK09874 drug efflux system pr 99.4 4E-11 8.7E-16 113.2 18.0 155 69-248 237-394 (408)
112 TIGR00897 2A0118 polyol permea 99.4 1.2E-10 2.5E-15 110.9 20.9 161 66-249 237-398 (402)
113 PRK09528 lacY galactoside perm 99.4 3.5E-11 7.6E-16 114.9 17.4 154 70-248 242-399 (420)
114 TIGR00879 SP MFS transporter, 99.3 5.7E-11 1.2E-15 113.0 18.0 163 73-249 305-467 (481)
115 PRK11551 putative 3-hydroxyphe 99.3 1E-10 2.3E-15 110.7 19.5 156 66-247 235-391 (406)
116 PRK10406 alpha-ketoglutarate t 99.3 1.3E-10 2.9E-15 111.6 20.4 160 66-247 258-419 (432)
117 KOG3764 Vesicular amine transp 99.3 5.2E-12 1.1E-16 118.3 9.4 144 81-248 100-243 (464)
118 PRK11663 regulatory protein Uh 99.3 1.1E-10 2.3E-15 112.4 18.8 161 66-248 258-420 (434)
119 PRK11010 ampG muropeptide tran 99.3 1.9E-10 4.2E-15 112.8 20.9 164 66-250 237-401 (491)
120 TIGR01272 gluP glucose/galacto 99.3 1.4E-10 3E-15 107.3 18.5 148 66-241 155-304 (310)
121 KOG2532 Permease of the major 99.3 2.8E-11 6E-16 117.9 14.3 145 81-248 67-212 (466)
122 TIGR00902 2A0127 phenyl propri 99.3 3.8E-10 8.2E-15 106.7 21.3 154 66-247 220-374 (382)
123 PF11700 ATG22: Vacuole efflux 99.3 2.4E-10 5.1E-15 111.8 20.5 168 65-249 294-465 (477)
124 TIGR00792 gph sugar (Glycoside 99.3 6.3E-11 1.4E-15 113.1 15.9 164 68-248 16-190 (437)
125 PRK11902 ampG muropeptide tran 99.3 3E-10 6.4E-15 108.0 20.0 153 70-247 18-177 (402)
126 TIGR01301 GPH_sucrose GPH fami 99.3 1.8E-10 3.8E-15 112.5 18.5 179 66-251 18-217 (477)
127 PRK11128 putative 3-phenylprop 99.3 1.9E-10 4.2E-15 108.6 17.9 149 67-245 20-172 (382)
128 KOG0569 Permease of the major 99.3 6.9E-11 1.5E-15 114.9 14.8 145 90-256 63-211 (485)
129 PLN00028 nitrate transmembrane 99.3 2.3E-10 4.9E-15 111.8 17.4 162 66-252 267-433 (476)
130 TIGR00902 2A0127 phenyl propri 99.2 6.4E-10 1.4E-14 105.1 19.2 146 70-242 23-169 (382)
131 TIGR00712 glpT glycerol-3-phos 99.2 2.5E-10 5.4E-15 110.0 16.4 163 66-248 266-429 (438)
132 PRK10091 MFS transport protein 99.2 7.5E-10 1.6E-14 104.6 19.2 158 66-248 214-372 (382)
133 TIGR00792 gph sugar (Glycoside 99.2 9E-10 2E-14 105.2 19.1 142 66-231 237-384 (437)
134 TIGR00881 2A0104 phosphoglycer 99.2 2.8E-10 6.1E-15 105.2 15.1 147 66-234 231-379 (379)
135 TIGR00900 2A0121 H+ Antiporter 99.2 9.4E-10 2E-14 101.3 18.0 140 66-229 225-365 (365)
136 TIGR02718 sider_RhtX_FptX side 99.2 2.1E-09 4.5E-14 101.6 20.6 162 66-246 223-385 (390)
137 TIGR02332 HpaX 4-hydroxyphenyl 99.2 5.3E-10 1.1E-14 107.1 16.2 150 66-240 257-409 (412)
138 PRK12307 putative sialic acid 99.2 1.8E-09 3.8E-14 102.9 19.8 147 66-236 246-392 (426)
139 COG2814 AraJ Arabinose efflux 99.2 2.2E-09 4.8E-14 101.8 19.7 177 51-253 209-387 (394)
140 COG2223 NarK Nitrate/nitrite t 99.2 4.3E-10 9.4E-15 106.2 14.5 176 54-248 218-397 (417)
141 TIGR00882 2A0105 oligosacchari 99.2 1.9E-09 4.2E-14 102.0 18.5 157 66-247 230-390 (396)
142 TIGR00896 CynX cyanate transpo 99.2 2.3E-09 4.9E-14 99.9 18.5 138 66-229 212-350 (355)
143 TIGR00710 efflux_Bcr_CflA drug 99.2 5.6E-09 1.2E-13 97.4 20.9 151 66-237 221-371 (385)
144 PRK15402 multidrug efflux syst 99.2 5.4E-09 1.2E-13 99.3 21.1 155 66-241 230-384 (406)
145 PRK10504 putative transporter; 99.2 4.2E-09 9.2E-14 101.9 20.6 143 66-230 276-418 (471)
146 PRK11128 putative 3-phenylprop 99.2 6.2E-09 1.4E-13 98.3 20.9 153 66-246 220-373 (382)
147 PRK10077 xylE D-xylose transpo 99.2 4E-09 8.7E-14 102.0 20.0 152 76-248 295-453 (479)
148 TIGR00788 fbt folate/biopterin 99.1 2.9E-09 6.2E-14 104.0 18.6 172 51-246 22-203 (468)
149 PF00083 Sugar_tr: Sugar (and 99.1 4E-13 8.6E-18 129.1 -8.4 147 88-256 47-198 (451)
150 TIGR00887 2A0109 phosphate:H+ 99.1 1.5E-09 3.3E-14 106.4 16.4 161 66-248 303-485 (502)
151 PF05977 MFS_3: Transmembrane 99.1 3.5E-09 7.6E-14 104.8 19.0 149 81-249 39-187 (524)
152 COG0738 FucP Fucose permease [ 99.1 5.7E-09 1.2E-13 98.3 19.0 139 66-226 27-165 (422)
153 TIGR00711 efflux_EmrB drug res 99.1 2.9E-09 6.3E-14 102.9 17.4 142 66-228 270-411 (485)
154 COG2807 CynX Cyanate permease 99.1 9.2E-09 2E-13 95.8 19.6 164 65-255 25-189 (395)
155 TIGR00895 2A0115 benzoate tran 99.1 3.7E-09 8.1E-14 98.5 17.4 133 66-224 265-397 (398)
156 KOG2533 Permease of the major 99.1 1.4E-09 3E-14 106.6 14.9 147 78-249 72-224 (495)
157 PRK08633 2-acyl-glycerophospho 99.1 6.5E-09 1.4E-13 111.0 21.1 154 66-244 247-402 (1146)
158 KOG0252 Inorganic phosphate tr 99.1 5.1E-10 1.1E-14 106.8 11.1 155 84-256 81-252 (538)
159 PRK10133 L-fucose transporter; 99.1 7.3E-09 1.6E-13 100.2 19.0 153 66-246 273-427 (438)
160 TIGR00894 2A0114euk Na(+)-depe 99.1 8.2E-09 1.8E-13 99.9 18.6 174 55-251 262-449 (465)
161 KOG2615 Permease of the major 99.1 1.3E-09 2.9E-14 101.8 12.1 133 68-226 45-181 (451)
162 PRK11902 ampG muropeptide tran 99.1 2.3E-08 5.1E-13 95.0 20.6 151 73-248 231-386 (402)
163 PRK09848 glucuronide transport 99.1 1E-08 2.3E-13 98.9 17.9 143 66-230 243-391 (448)
164 PRK06814 acylglycerophosphoeth 99.0 1.3E-08 2.8E-13 109.1 20.1 172 66-243 240-413 (1140)
165 KOG2504 Monocarboxylate transp 99.0 3.6E-09 7.9E-14 104.3 14.6 155 73-253 67-222 (509)
166 PRK09669 putative symporter Ya 99.0 5.4E-09 1.2E-13 100.8 15.2 164 66-246 24-198 (444)
167 PRK14995 methyl viologen resis 99.0 1.3E-08 2.7E-13 99.9 17.7 140 66-227 274-413 (495)
168 KOG4686 Predicted sugar transp 99.0 9.6E-09 2.1E-13 93.0 15.3 151 52-229 262-416 (459)
169 TIGR00889 2A0110 nucleoside tr 99.0 2.2E-08 4.8E-13 96.2 18.7 144 70-245 21-173 (418)
170 PRK10213 nepI ribonucleoside t 99.0 7.1E-08 1.5E-12 91.8 21.4 152 66-243 231-382 (394)
171 PF05977 MFS_3: Transmembrane 99.0 4.3E-08 9.4E-13 97.0 19.6 154 70-248 237-390 (524)
172 COG2270 Permeases of the major 99.0 1.8E-08 3.8E-13 95.6 15.8 161 65-250 265-427 (438)
173 PRK15034 nitrate/nitrite trans 99.0 4.7E-08 1E-12 95.2 18.7 173 56-248 254-450 (462)
174 PRK10429 melibiose:sodium symp 99.0 2.6E-08 5.6E-13 97.1 17.0 162 66-245 21-194 (473)
175 PRK11646 multidrug resistance 99.0 3.8E-08 8.3E-13 93.9 17.8 153 70-247 227-383 (400)
176 PRK10054 putative transporter; 98.9 3.1E-08 6.7E-13 94.3 16.4 152 71-247 226-379 (395)
177 PRK10429 melibiose:sodium symp 98.9 8E-08 1.7E-12 93.7 19.1 157 54-230 231-396 (473)
178 PRK09669 putative symporter Ya 98.9 1.2E-07 2.6E-12 91.5 20.0 120 89-230 266-391 (444)
179 PF13347 MFS_2: MFS/sugar tran 98.9 6.8E-08 1.5E-12 92.8 17.7 142 66-230 240-387 (428)
180 PRK11102 bicyclomycin/multidru 98.9 2.2E-07 4.7E-12 86.9 20.6 135 66-222 209-344 (377)
181 TIGR00901 2A0125 AmpG-related 98.9 5.1E-08 1.1E-12 90.7 15.8 132 65-211 222-355 (356)
182 TIGR00898 2A0119 cation transp 98.9 9.2E-08 2E-12 93.4 18.3 130 93-247 361-490 (505)
183 TIGR02718 sider_RhtX_FptX side 98.9 1.5E-07 3.2E-12 89.0 19.1 170 57-248 4-180 (390)
184 KOG0569 Permease of the major 98.9 2E-07 4.4E-12 90.9 20.2 198 51-266 266-472 (485)
185 TIGR00903 2A0129 major facilit 98.9 2.1E-07 4.6E-12 88.1 19.0 160 57-248 195-361 (368)
186 COG2807 CynX Cyanate permease 98.9 2.9E-07 6.2E-12 85.9 18.9 182 50-256 205-390 (395)
187 PRK11195 lysophospholipid tran 98.9 2.5E-07 5.3E-12 88.1 19.0 153 68-246 222-374 (393)
188 KOG2504 Monocarboxylate transp 98.8 8.7E-08 1.9E-12 94.5 15.9 170 57-252 302-476 (509)
189 PF07690 MFS_1: Major Facilita 98.8 5.6E-08 1.2E-12 89.1 13.6 131 66-218 221-352 (352)
190 PRK10473 multidrug efflux syst 98.8 3.6E-07 7.8E-12 86.3 19.0 68 70-138 222-289 (392)
191 PRK11462 putative transporter; 98.8 2.2E-07 4.7E-12 90.5 17.9 163 66-245 24-197 (460)
192 PRK11043 putative transporter; 98.8 8.9E-07 1.9E-11 83.8 21.5 142 66-229 218-359 (401)
193 PF05631 DUF791: Protein of un 98.8 2.4E-07 5.2E-12 86.5 16.9 148 77-249 59-213 (354)
194 PF13347 MFS_2: MFS/sugar tran 98.8 2.4E-08 5.2E-13 95.9 10.5 172 67-254 17-200 (428)
195 KOG2532 Permease of the major 98.8 1.1E-07 2.5E-12 92.7 15.1 175 56-251 260-446 (466)
196 TIGR00885 fucP L-fucose:H+ sym 98.8 4.2E-07 9.2E-12 87.2 18.3 150 66-243 247-403 (410)
197 KOG0253 Synaptic vesicle trans 98.7 5.7E-07 1.2E-11 84.3 15.0 104 93-221 387-490 (528)
198 PRK11462 putative transporter; 98.7 4.8E-06 1E-10 81.2 22.1 131 77-230 254-390 (460)
199 KOG2325 Predicted transporter/ 98.7 2.4E-07 5.3E-12 90.1 12.7 188 49-257 29-235 (488)
200 PRK09848 glucuronide transport 98.7 1E-06 2.2E-11 85.1 17.1 143 66-224 23-174 (448)
201 TIGR00886 2A0108 nitrite extru 98.7 2.2E-07 4.8E-12 86.2 12.1 126 66-213 240-365 (366)
202 COG2211 MelB Na+/melibiose sym 98.7 1.7E-06 3.7E-11 83.9 18.1 142 66-229 251-398 (467)
203 PF03825 Nuc_H_symport: Nucleo 98.6 1.1E-05 2.5E-10 77.3 20.8 158 71-248 227-391 (400)
204 KOG0253 Synaptic vesicle trans 98.6 3.8E-06 8.2E-11 78.9 16.2 164 66-256 91-257 (528)
205 PRK11652 emrD multidrug resist 98.5 1.4E-05 3E-10 75.5 20.2 137 72-231 228-364 (394)
206 TIGR00924 yjdL_sub1_fam amino 98.5 7.9E-06 1.7E-10 80.0 17.6 173 66-253 287-469 (475)
207 PF01306 LacY_symp: LacY proto 98.5 1.6E-06 3.4E-11 83.2 12.2 159 70-252 26-188 (412)
208 PF06813 Nodulin-like: Nodulin 98.5 1.3E-05 2.8E-10 72.1 16.8 149 53-222 2-152 (250)
209 COG0477 ProP Permeases of the 98.4 1.2E-05 2.6E-10 70.1 16.3 142 78-241 28-174 (338)
210 PF03209 PUCC: PUCC protein; 98.4 2.2E-05 4.7E-10 74.7 18.2 162 66-248 223-394 (403)
211 PF01306 LacY_symp: LacY proto 98.4 1.9E-05 4E-10 75.8 17.6 157 66-247 235-395 (412)
212 COG2211 MelB Na+/melibiose sym 98.3 2.1E-05 4.6E-10 76.4 15.9 175 54-245 13-200 (467)
213 COG0738 FucP Fucose permease [ 98.3 2.9E-05 6.2E-10 73.6 16.2 138 70-235 255-392 (422)
214 PRK15403 multidrug efflux syst 98.3 9.9E-05 2.1E-09 70.7 19.7 155 66-242 233-387 (413)
215 PRK09584 tppB putative tripept 98.3 6.5E-05 1.4E-09 74.1 18.2 149 89-253 318-480 (500)
216 PF03092 BT1: BT1 family; Int 98.2 3.3E-05 7.1E-10 74.9 15.5 153 73-245 11-168 (433)
217 PF03137 OATP: Organic Anion T 98.2 1.8E-07 4E-12 92.9 -0.8 189 66-256 17-254 (539)
218 KOG3626 Organic anion transpor 98.2 2E-05 4.3E-10 80.1 12.1 189 66-256 111-347 (735)
219 KOG3764 Vesicular amine transp 98.1 5.9E-06 1.3E-10 78.1 7.0 149 70-242 289-444 (464)
220 KOG2533 Permease of the major 98.1 3.6E-05 7.7E-10 75.8 12.8 151 66-239 288-443 (495)
221 KOG2563 Permease of the major 98.1 0.00021 4.6E-09 68.7 17.3 156 50-227 38-202 (480)
222 PRK10207 dipeptide/tripeptide 98.1 0.00015 3.2E-09 71.4 17.0 175 66-255 284-479 (489)
223 PF00083 Sugar_tr: Sugar (and 98.1 1.7E-08 3.6E-13 97.0 -11.0 161 70-248 271-432 (451)
224 TIGR00788 fbt folate/biopterin 98.0 7.2E-05 1.6E-09 73.1 12.0 145 79-238 280-429 (468)
225 PF03825 Nuc_H_symport: Nucleo 98.0 0.0013 2.9E-08 63.1 20.2 100 71-194 22-121 (400)
226 KOG2816 Predicted transporter 97.9 0.00028 6.1E-09 69.0 14.4 151 70-250 40-197 (463)
227 KOG0252 Inorganic phosphate tr 97.9 2E-05 4.4E-10 75.8 6.1 180 54-254 304-500 (538)
228 PF03209 PUCC: PUCC protein; 97.9 0.00055 1.2E-08 65.3 15.2 142 78-229 6-153 (403)
229 PF12832 MFS_1_like: MFS_1 lik 97.8 0.00018 4E-09 52.8 8.7 56 70-127 19-74 (77)
230 KOG0254 Predicted transporter 97.8 0.0016 3.5E-08 64.3 17.6 122 70-205 314-435 (513)
231 TIGR01301 GPH_sucrose GPH fami 97.8 0.0027 5.9E-08 62.4 18.7 202 49-254 253-473 (477)
232 PTZ00207 hypothetical protein; 97.7 0.00061 1.3E-08 68.5 13.7 181 56-266 355-568 (591)
233 KOG4686 Predicted sugar transp 97.7 3.3E-06 7.2E-11 76.8 -2.4 137 71-228 63-199 (459)
234 KOG3762 Predicted transporter 97.6 0.00037 8E-09 68.4 9.3 158 70-253 390-548 (618)
235 PF06609 TRI12: Fungal trichot 97.6 0.0063 1.4E-07 61.3 18.1 86 51-137 307-399 (599)
236 PF05978 UNC-93: Ion channel r 97.5 0.0076 1.6E-07 50.3 15.5 111 86-222 36-146 (156)
237 TIGR00805 oat sodium-independe 97.4 0.0045 9.7E-08 63.0 15.3 69 65-134 343-415 (633)
238 TIGR01272 gluP glucose/galacto 97.3 0.0013 2.9E-08 60.7 9.4 78 163-241 9-102 (310)
239 PF11700 ATG22: Vacuole efflux 97.2 0.075 1.6E-06 52.3 20.4 131 90-242 73-237 (477)
240 KOG0637 Sucrose transporter an 97.1 0.0012 2.6E-08 63.8 6.5 163 55-224 33-202 (498)
241 KOG0255 Synaptic vesicle trans 97.0 0.062 1.3E-06 52.9 18.2 106 99-226 362-467 (521)
242 PF01770 Folate_carrier: Reduc 96.9 0.086 1.9E-06 50.8 17.2 151 71-248 23-178 (412)
243 PRK03612 spermidine synthase; 96.8 0.17 3.6E-06 50.4 19.6 156 76-251 39-197 (521)
244 PRK15462 dipeptide/tripeptide 96.8 0.13 2.9E-06 50.8 18.3 142 66-224 283-437 (493)
245 KOG2563 Permease of the major 96.7 0.027 5.8E-07 54.6 12.0 158 81-260 295-458 (480)
246 PF06779 DUF1228: Protein of u 96.6 0.02 4.3E-07 42.8 8.7 66 72-138 12-77 (85)
247 KOG2615 Permease of the major 96.5 0.037 8.1E-07 52.7 11.5 132 71-226 280-413 (451)
248 COG2270 Permeases of the major 96.4 0.084 1.8E-06 50.8 13.4 125 71-218 35-168 (438)
249 KOG2816 Predicted transporter 96.3 0.023 4.9E-07 55.7 9.4 127 74-225 264-390 (463)
250 KOG4332 Predicted sugar transp 96.0 0.0076 1.7E-07 54.9 4.1 149 75-248 60-216 (454)
251 PF06963 FPN1: Ferroportin1 (F 95.5 2.3 5E-05 41.4 19.4 186 74-268 25-217 (432)
252 TIGR00769 AAA ADP/ATP carrier 95.5 1.4 3E-05 43.4 18.0 141 78-225 29-189 (472)
253 KOG1330 Sugar transporter/spin 95.5 0.068 1.5E-06 52.0 8.4 149 81-247 277-443 (493)
254 COG3104 PTR2 Dipeptide/tripept 94.4 1.4 3.1E-05 43.4 14.4 159 70-243 303-478 (498)
255 KOG3762 Predicted transporter 94.3 0.049 1.1E-06 53.9 4.3 62 70-133 30-92 (618)
256 KOG3098 Uncharacterized conser 94.3 4.3 9.3E-05 39.9 17.6 119 96-222 288-409 (461)
257 PF06963 FPN1: Ferroportin1 (F 94.2 3.6 7.8E-05 40.1 16.8 132 72-220 279-411 (432)
258 PF03137 OATP: Organic Anion T 94.0 0.015 3.3E-07 58.1 0.0 155 66-227 320-514 (539)
259 KOG3574 Acetyl-CoA transporter 93.0 1.2 2.6E-05 42.8 10.6 155 49-220 26-188 (510)
260 KOG2325 Predicted transporter/ 91.2 0.49 1.1E-05 46.6 6.2 195 51-247 259-470 (488)
261 KOG3098 Uncharacterized conser 91.1 2.1 4.6E-05 42.0 10.5 88 92-205 55-142 (461)
262 TIGR00926 2A1704 Peptide:H+ sy 90.4 7 0.00015 40.2 14.0 131 82-228 15-147 (654)
263 KOG4332 Predicted sugar transp 87.1 5.7 0.00012 36.7 9.4 78 168-246 348-425 (454)
264 KOG3626 Organic anion transpor 86.0 2.7 5.9E-05 43.4 7.6 70 65-134 405-477 (735)
265 TIGR00769 AAA ADP/ATP carrier 83.4 7.1 0.00015 38.5 9.0 70 174-243 276-345 (472)
266 KOG3097 Predicted membrane pro 80.7 25 0.00055 33.2 11.0 140 50-220 25-180 (390)
267 PF03092 BT1: BT1 family; Int 76.4 47 0.001 32.1 12.2 136 79-229 244-382 (433)
268 COG5336 Uncharacterized protei 75.5 10 0.00022 29.6 5.7 31 100-130 55-85 (116)
269 PF03219 TLC: TLC ATP/ADP tran 75.1 74 0.0016 31.6 13.3 121 99-226 71-205 (491)
270 PRK10263 DNA translocase FtsK; 71.4 32 0.0007 38.0 10.3 35 212-246 142-176 (1355)
271 PF02487 CLN3: CLN3 protein; 71.2 87 0.0019 30.3 12.3 62 163-225 334-395 (402)
272 KOG4830 Predicted sugar transp 70.7 6.2 0.00013 36.2 4.1 70 50-121 14-94 (412)
273 PF03219 TLC: TLC ATP/ADP tran 70.6 1.2E+02 0.0025 30.2 18.2 63 175-237 293-355 (491)
274 PF02487 CLN3: CLN3 protein; 69.8 56 0.0012 31.6 10.7 71 164-241 112-184 (402)
275 PF09527 ATPase_gene1: Putativ 69.5 31 0.00066 23.0 6.5 35 95-129 8-42 (55)
276 TIGR00806 rfc RFC reduced fola 64.8 39 0.00085 33.6 8.7 93 90-205 301-393 (511)
277 TIGR00939 2a57 Equilibrative N 61.6 1.3E+02 0.0028 29.2 11.7 55 165-220 373-427 (437)
278 PF06645 SPC12: Microsomal sig 60.6 21 0.00045 25.9 4.6 47 206-255 13-59 (76)
279 KOG2601 Iron transporter [Inor 54.2 2.2E+02 0.0047 27.8 12.8 60 75-135 51-110 (503)
280 KOG4112 Signal peptidase subun 54.0 45 0.00098 25.3 5.4 50 205-257 27-76 (101)
281 TIGR02230 ATPase_gene1 F0F1-AT 52.9 57 0.0012 25.1 6.0 28 97-124 52-79 (100)
282 COG3202 ATP/ADP translocase [E 49.8 1.1E+02 0.0024 30.4 9.0 74 176-249 296-370 (509)
283 TIGR00880 2_A_01_02 Multidrug 40.8 1.5E+02 0.0032 22.0 10.3 40 90-130 90-129 (141)
284 KOG1237 H+/oligopeptide sympor 39.1 1.1E+02 0.0025 30.9 7.5 64 163-227 457-520 (571)
285 PF12805 FUSC-like: FUSC-like 38.9 2.9E+02 0.0064 24.9 9.7 15 166-180 25-39 (284)
286 KOG1479 Nucleoside transporter 37.7 3.9E+02 0.0085 25.9 19.1 80 164-249 117-201 (406)
287 PF11947 DUF3464: Protein of u 37.0 1.3E+02 0.0028 25.0 6.2 48 165-216 98-145 (153)
288 TIGR01667 YCCS_YHJK integral m 37.0 3.8E+02 0.0083 27.9 11.0 33 106-138 42-77 (701)
289 COG3086 RseC Positive regulato 36.8 1.5E+02 0.0033 24.4 6.4 41 82-123 67-107 (150)
290 PF06570 DUF1129: Protein of u 36.3 2E+02 0.0044 24.7 7.8 32 224-255 170-201 (206)
291 TIGR01666 YCCS hypothetical me 34.6 5.1E+02 0.011 27.1 11.5 33 106-138 42-77 (704)
292 COG3202 ATP/ADP translocase [E 34.3 4.9E+02 0.011 26.0 15.7 139 78-226 49-209 (509)
293 TIGR00939 2a57 Equilibrative N 33.8 4.5E+02 0.0098 25.5 13.7 31 163-194 105-135 (437)
294 PF13782 SpoVAB: Stage V sporu 32.3 2.1E+02 0.0045 22.5 6.3 46 173-218 53-104 (110)
295 TIGR02230 ATPase_gene1 F0F1-AT 31.1 2.4E+02 0.0053 21.6 6.9 22 208-229 50-71 (100)
296 PRK12460 2-keto-3-deoxyglucona 31.0 3.2E+02 0.007 25.5 8.4 22 207-228 286-307 (312)
297 TIGR00383 corA magnesium Mg(2+ 30.9 1.1E+02 0.0023 28.0 5.5 27 219-245 273-305 (318)
298 PF09930 DUF2162: Predicted tr 30.6 3.8E+02 0.0083 23.7 9.3 64 77-144 121-184 (224)
299 COG0598 CorA Mg2+ and Co2+ tra 30.0 90 0.0019 28.9 4.8 24 228-251 292-316 (322)
300 PF13000 Acatn: Acetyl-coenzym 28.9 4.3E+02 0.0093 26.6 9.3 55 171-226 412-466 (544)
301 PF06779 DUF1228: Protein of u 28.5 2.5E+02 0.0053 20.8 7.5 65 175-243 5-69 (85)
302 KOG0637 Sucrose transporter an 27.5 3.1E+02 0.0067 27.2 8.0 87 49-136 274-380 (498)
303 PF11299 DUF3100: Protein of u 27.0 49 0.0011 29.5 2.3 24 173-196 180-203 (241)
304 PF06645 SPC12: Microsomal sig 26.3 2.5E+02 0.0055 20.2 6.1 26 89-114 9-34 (76)
305 PF10777 YlaC: Inner membrane 25.8 2.1E+02 0.0046 23.7 5.6 37 220-256 51-87 (155)
306 PRK02237 hypothetical protein; 25.1 1.8E+02 0.0039 22.7 4.8 47 87-134 56-102 (109)
307 PF02694 UPF0060: Uncharacteri 23.5 1.5E+02 0.0032 23.1 4.0 48 86-134 53-100 (107)
308 PF03988 DUF347: Repeat of Unk 23.4 2.4E+02 0.0051 18.9 5.3 20 211-230 8-27 (55)
309 KOG4783 Uncharacterized conser 23.2 2.6E+02 0.0057 21.3 5.2 19 77-95 53-71 (102)
310 PF06912 DUF1275: Protein of u 23.0 4.7E+02 0.01 22.2 17.0 36 207-243 168-203 (209)
311 PF05992 SbmA_BacA: SbmA/BacA- 22.8 1E+02 0.0022 28.7 3.6 9 257-265 194-202 (315)
312 PF04226 Transgly_assoc: Trans 21.4 2.5E+02 0.0053 18.3 4.7 28 212-239 6-33 (48)
313 PRK09546 zntB zinc transporter 21.2 1.7E+02 0.0036 27.1 4.8 25 219-243 279-309 (324)
314 COG1296 AzlC Predicted branche 20.8 4.2E+02 0.009 23.7 7.0 42 199-240 135-177 (238)
No 1
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=99.96 E-value=1.2e-27 Score=236.48 Aligned_cols=243 Identities=37% Similarity=0.566 Sum_probs=216.9
Q ss_pred cccccCCccccccc--ccCCchhHHHHHHHHH--H-hHHHhHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHH
Q 045564 35 AATDTHREAQISNA--KRGGRTALLSRTVTCL--T-LGEGWVANLMVYMIQEFHITSINSALISNIVNGFVNLFPVLGAI 109 (296)
Q Consensus 35 ~~v~~~~~p~~~~~--~~~~~~~~~~l~~~~~--~-~~y~~~~~l~~yl~~~lg~s~~~a~~i~~~~~~~~~~~~l~~G~ 109 (296)
..+|++++|..+.. +.+.|+++..+++.+. + ++||+..++..|+++++|.+...+...++.|.+...+.++++++
T Consensus 16 ~~~d~~~~~~~~~~~~~~g~~~s~~~il~~e~~e~~a~~g~~~nlv~ylt~~~~~~~~~aa~~v~~f~G~~~~~~l~g~~ 95 (571)
T KOG1237|consen 16 TSVDYRGPLLGSSIAFKTGGWLSAPFILGNEVLERLAFFGLVSNLVTYLTLELHASGGGAANNVNAFGGTQFLLPLLGAF 95 (571)
T ss_pred ceeeccCCcccccccceechhHhHHHHHHHHHHHHHhHhcchhHHHHHHHHHhccchHHHHHHHHHHhhHHHHHHHHHHH
Confidence 35788887655421 5688999999999998 8 99999999999999999999999999999999999999999999
Q ss_pred HhhhhcchHHHHHHHHHHHHHHHHHHHhhccccCCCCCcc--CCCCcCcCCCCchhhHHHHHHHHHHHHhhchhhhhhhh
Q 045564 110 IADSFLGSFQVIWISSFISLLGTILLDSTATFDSLRPQRC--DIGLSLCKAPSKVQFAVLYSGIALACLGLGGLRFTLAT 187 (296)
Q Consensus 110 laDr~iGR~~~i~i~~~l~~ig~~~la~~~~~p~~~~~~c--~~~~~~~~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~ 187 (296)
++|.++||++++.++.+++.+|..++++++..|.+.++.| ...+..|..++..+...++.++.++++|.|+.+|+..+
T Consensus 96 laD~f~gry~tI~~~s~i~~~G~~~lt~~a~~~~l~p~~~~~~~~~~~c~~~s~~q~~~~~~~l~lia~G~gg~r~~~~~ 175 (571)
T KOG1237|consen 96 LADSFLGRYFTINIGSLISLLGLFGLTLSAMIPALLPFMCKFKPGGNVCESPSKLQLAVLYGALYLIALGAGGIRPCLLA 175 (571)
T ss_pred HHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCccccCCCCCCcccCcchHHHHHHHHHHHHheeccCCCCCcchh
Confidence 9999999999999999999999999999988888888776 22234677777778889999999999999999999999
Q ss_pred hhhccCC---Cc--cchhhHHHHHHHHHHHHHHHHHHHHHhhhccccchhhHHHHHHHHHHHHHHHHhCCCchh------
Q 045564 188 MGANQFE---IP--QHQGIFFNWFFILTYASTVISSAAFVYIEDNLSWRLGSGLNIAANLAGVVIFLSGKHFYF------ 256 (296)
Q Consensus 188 ~~ad~f~---~~--~~r~~~f~~~y~~~~iG~~i~p~v~~~l~~~~gw~~~F~i~~~~~~~~~~~~~~~~~~~~------ 256 (296)
+.+|||+ ++ ..+.++|+|+|+..|+|.+++-.+..|++++.||.++|.++.+.+++++++|+.+.+.|+
T Consensus 176 fGadQfd~~~~~~~~~~~~fFnW~yf~~~~g~l~a~t~~vyiq~~~~w~lgf~i~~~~~~lai~iF~~g~~~y~~~~p~g 255 (571)
T KOG1237|consen 176 FGADQFDELDPVEVKGIPSFFNWFYFSQNGGALLAQTVLVYIQDNVGWKLGFGIPTVLNALAILIFLPGFPFYRYKKPRG 255 (571)
T ss_pred hcccccCccCcchhhCcccchhHHHHHHHHHHHHHHHHHHhhhhcccceeeccHHHHHHHHHHHHHHcCceeEEeeCCCC
Confidence 9999998 22 234589999999999999999999999999999999999999999999999999998776
Q ss_pred -------HHHHHHHhcCCCcCCCCchhh
Q 045564 257 -------PVIVASVKKWKPVLSSRSEDY 277 (296)
Q Consensus 257 -------~v~~~~~~~~~~~~~~~~~~~ 277 (296)
+|++|+.|||+...+++++++
T Consensus 256 sp~t~i~~Vlvaa~~k~~~~~~~~~~~~ 283 (571)
T KOG1237|consen 256 SPKTRIGQVLVAAAFKRKAVVSLDPEEL 283 (571)
T ss_pred CchhHHHHHHHHHHHHHhccCCCcchhc
Confidence 999999999999888875554
No 2
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=99.95 E-value=5.2e-28 Score=230.86 Aligned_cols=187 Identities=21% Similarity=0.324 Sum_probs=173.4
Q ss_pred ccCCchhHHHHHHHHH--H-hHHHhHHHHHHHHHHHhC----CChhHHHHHHHHHHHHHHHHHHHHHHHhhhhcchHHHH
Q 045564 49 KRGGRTALLSRTVTCL--T-LGEGWVANLMVYMIQEFH----ITSINSALISNIVNGFVNLFPVLGAIIADSFLGSFQVI 121 (296)
Q Consensus 49 ~~~~~~~~~~l~~~~~--~-~~y~~~~~l~~yl~~~lg----~s~~~a~~i~~~~~~~~~~~~l~~G~laDr~iGR~~~i 121 (296)
..+|||.++.++.+|+ | +|||+.+.+..|++..++ +++++|..+.+.|....++.+++|||+|||++|+||++
T Consensus 16 ~f~~Pr~l~~if~vE~WERFsyYGmraiL~~Yl~~~~~~gLg~~~~~A~~l~~~y~slVY~t~i~GG~laDr~LG~~~tI 95 (498)
T COG3104 16 FFGQPRGLYLIFFVELWERFSYYGMRAILILYLYYQLGDGLGFDETHATGLFSAYGSLVYLTPIIGGWLADRVLGTRRTI 95 (498)
T ss_pred cCCCCchHHHHHHHHHHHHHhhhhhHHHHHHHHHHhccccCCcChHhhHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHH
Confidence 5679999999999999 9 999999999999999988 99999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhccccCCCCCccCCCCcCcCCCCchhhHHHHHHHHHHHHhhchhhhhhhhhhhccCC-Cccchh
Q 045564 122 WISSFISLLGTILLDSTATFDSLRPQRCDIGLSLCKAPSKVQFAVLYSGIALACLGLGGLRFTLATMGANQFE-IPQHQG 200 (296)
Q Consensus 122 ~i~~~l~~ig~~~la~~~~~p~~~~~~c~~~~~~~~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~~~ad~f~-~~~~r~ 200 (296)
+++.+++++|+++++.+. . .+...++++++++++|.|+.++++.++++|++| ++.||+
T Consensus 96 ~lGail~~iGh~~L~~~~-~--------------------~~~~gl~i~L~~I~iG~Gl~K~NiS~llg~ly~~~DprrD 154 (498)
T COG3104 96 VLGAILMAIGHLVLAISS-V--------------------SGPGGLYIGLALIIVGTGLFKPNISSLLGELYPKDDPRRD 154 (498)
T ss_pred HHHHHHHHHHHHHHhccc-c--------------------ccccHHHHHHHHHHhccccccccHHHHHHHhcCCCCcccC
Confidence 999999999999998763 0 123578999999999999999999999999998 455799
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhhccccchhhHHHHHHHHHHHHHHHHhCCCchh
Q 045564 201 IFFNWFFILTYASTVISSAAFVYIEDNLSWRLGSGLNIAANLAGVVIFLSGKHFYF 256 (296)
Q Consensus 201 ~~f~~~y~~~~iG~~i~p~v~~~l~~~~gw~~~F~i~~~~~~~~~~~~~~~~~~~~ 256 (296)
.+|+++|++.|+|++++|++.+++.+++||+.+|.++++.+.++++.+...++++.
T Consensus 155 ~gFt~fY~~iNiGsl~~p~i~~~~~~~~g~~~gF~~aavGm~~gl~~f~~~~r~~~ 210 (498)
T COG3104 155 GGFTLFYMGINIGSLIAPIITGLLAINYGWHVGFGLAAVGMIIGLVIFLLGRRHVK 210 (498)
T ss_pred CCccEEEEEeehHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHccchhc
Confidence 99999999999999999999999999999999999999999999999988877664
No 3
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=99.93 E-value=6.2e-25 Score=214.97 Aligned_cols=184 Identities=12% Similarity=0.190 Sum_probs=162.0
Q ss_pred ccCCchhHHHHHHHHH--H-hHHHhHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhcchHHHHHHHH
Q 045564 49 KRGGRTALLSRTVTCL--T-LGEGWVANLMVYMIQEFHITSINSALISNIVNGFVNLFPVLGAIIADSFLGSFQVIWISS 125 (296)
Q Consensus 49 ~~~~~~~~~~l~~~~~--~-~~y~~~~~l~~yl~~~lg~s~~~a~~i~~~~~~~~~~~~l~~G~laDr~iGR~~~i~i~~ 125 (296)
+++|||.++.+++.++ | ++|++..+++.|+++++|++.+++.++.+.+.+..++.++++|+++||++||||++.++.
T Consensus 9 ~~~~p~~~~~~~~~~~~er~~~y~~~~~l~~yl~~~lg~~~~~a~~i~~~~~~~~~~~~~~~G~laDr~~G~r~~~~~g~ 88 (489)
T PRK10207 9 LLQQPRPFFMIFFVELWERFGYYGVQGILAVFFVKQLGFSQEQAFITFGAFAALVYGLISIGGYVGDHLLGTKRTIVLGA 88 (489)
T ss_pred hhcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhHHHhhhhccchHHHHHHHH
Confidence 5689999999999998 8 999999999999999999999999999999999999999999999999779999999999
Q ss_pred HHHHHHHHHHHhhccccCCCCCccCCCCcCcCCCCchhhHHHHHHHHHHHHhhchhhhhhhhhhhccCCCcc-chhhHHH
Q 045564 126 FISLLGTILLDSTATFDSLRPQRCDIGLSLCKAPSKVQFAVLYSGIALACLGLGGLRFTLATMGANQFEIPQ-HQGIFFN 204 (296)
Q Consensus 126 ~l~~ig~~~la~~~~~p~~~~~~c~~~~~~~~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~~~ad~f~~~~-~r~~~f~ 204 (296)
+++.+|++.+.++.. ....++++|+++++|.|..+|+..++++|+||+++ +|++.++
T Consensus 89 ~~~~~g~~~~~~~~~----------------------~~~ll~~~~~l~~ig~g~~~~~~~~li~~~~p~~~~~~~~~~~ 146 (489)
T PRK10207 89 IVLAIGYFMTGMSLL----------------------KPDLIFIALGTIAVGNGLFKANPASLLSKCYPPKDPRLDGAFT 146 (489)
T ss_pred HHHHHHHHHHHHhcc----------------------chhHHHHHHHHHHhccccccCCHHHHHHHhcCCCchhhhcchh
Confidence 999999988876531 11245678999999999999999999999998443 5688999
Q ss_pred HHHHHHHHHHHHHHHHHHhhhccccchhhHHHHHHHHHHHHHHHHhCCCc
Q 045564 205 WFFILTYASTVISSAAFVYIEDNLSWRLGSGLNIAANLAGVVIFLSGKHF 254 (296)
Q Consensus 205 ~~y~~~~iG~~i~p~v~~~l~~~~gw~~~F~i~~~~~~~~~~~~~~~~~~ 254 (296)
++|++.|+|+.+||.+++++.++.|||++|++..+.+.++++.+...+++
T Consensus 147 ~~~~~~nig~~~g~~l~g~l~~~~gw~~~F~i~~i~~~~~~~~~~~~~~~ 196 (489)
T PRK10207 147 LFYMSINIGSLISLSLAPVIADKFGYSVTYNLCGAGLIIALLVYFACRGM 196 (489)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhChHHHHHHHHHHHHHHHHHHHHcchh
Confidence 99999999999999999999999999999999877776666666555433
No 4
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=99.91 E-value=4e-23 Score=201.50 Aligned_cols=184 Identities=20% Similarity=0.376 Sum_probs=158.8
Q ss_pred cCCchhHHHHHHHHH--H-hHHHhHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhcchHHHHHHHHH
Q 045564 50 RGGRTALLSRTVTCL--T-LGEGWVANLMVYMIQEFHITSINSALISNIVNGFVNLFPVLGAIIADSFLGSFQVIWISSF 126 (296)
Q Consensus 50 ~~~~~~~~~l~~~~~--~-~~y~~~~~l~~yl~~~lg~s~~~a~~i~~~~~~~~~~~~l~~G~laDr~iGR~~~i~i~~~ 126 (296)
.+|||.++.+++.++ + ++|++..+++.|+++.+|++..+++.+.+.+.+..+++++++|+++||++||||++.++.+
T Consensus 5 ~~~p~~l~~l~~~~~~e~fs~Yg~~~~L~~yL~~~lgls~~~a~~i~~~~~~~~~l~~ligG~LaDRilGrrr~iliG~i 84 (493)
T PRK15462 5 ASQPRAIYYVVALQIWEYFSFYGMRALLILYLTNQLKYDDNHAYELFSAYCSLVYVTPILGGFLADKVLGNRMAVMLGAL 84 (493)
T ss_pred ccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcHHHHHHHHH
Confidence 459999999999888 8 9999999999999999999999999999999999999999999999994499999999999
Q ss_pred HHHHHHHHHHhhccccCCCCCccCCCCcCcCCCCchhhHHHHHHHHHHHHhhchhhhhhhhhhhccCCCc-cchhhHHHH
Q 045564 127 ISLLGTILLDSTATFDSLRPQRCDIGLSLCKAPSKVQFAVLYSGIALACLGLGGLRFTLATMGANQFEIP-QHQGIFFNW 205 (296)
Q Consensus 127 l~~ig~~~la~~~~~p~~~~~~c~~~~~~~~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~~~ad~f~~~-~~r~~~f~~ 205 (296)
+..+|+++++.... ....++++..+.++|.|..+++.+++++|+||++ .+|++++++
T Consensus 85 l~~lg~lll~~~~~----------------------~~~~~~l~l~li~iG~G~~~~~~~alv~elfp~~~~~R~sgf~i 142 (493)
T PRK15462 85 LMAIGHVVLGASEI----------------------HPSFLYLSLAIIVCGYGLFKSNVSCLLGELYEPTDPRRDGGFSL 142 (493)
T ss_pred HHHHHHHHHHHhhc----------------------chhHHHHHHHHHHHhcccccccHHHHHHHHCCCCCccccceehH
Confidence 99999876653210 1123455566677888888999999999999843 479999999
Q ss_pred HHHHHHHHHHHHHHHHHhhhccccchhhHHHHHHHHHHHHHHHHhCCCch
Q 045564 206 FFILTYASTVISSAAFVYIEDNLSWRLGSGLNIAANLAGVVIFLSGKHFY 255 (296)
Q Consensus 206 ~y~~~~iG~~i~p~v~~~l~~~~gw~~~F~i~~~~~~~~~~~~~~~~~~~ 255 (296)
+|+..|+|+.++|.+.+++.+.+||+++|.++++.++++++.++..++++
T Consensus 143 ~Y~~~nlG~~iap~l~g~L~~~~Gw~~~F~iaaigm~l~li~~~~~~~~l 192 (493)
T PRK15462 143 MYAAGNVGSIIAPIACGYAQEEYSWAMGFGLAAVGMIAGLVIFLCGNRHF 192 (493)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhChHHHHHHHHHHHHHHHHHHHHhhhhh
Confidence 99999999999999999999999999999999888888887777665544
No 5
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=99.90 E-value=1.9e-22 Score=196.77 Aligned_cols=184 Identities=18% Similarity=0.308 Sum_probs=161.6
Q ss_pred ccCCchhHHHHHHHHH--H-hHHHhHHHHHHHHHHH--hCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhcchHHHHHH
Q 045564 49 KRGGRTALLSRTVTCL--T-LGEGWVANLMVYMIQE--FHITSINSALISNIVNGFVNLFPVLGAIIADSFLGSFQVIWI 123 (296)
Q Consensus 49 ~~~~~~~~~~l~~~~~--~-~~y~~~~~l~~yl~~~--lg~s~~~a~~i~~~~~~~~~~~~l~~G~laDr~iGR~~~i~i 123 (296)
.++|||.++.+++.++ + ++|++..+++.|++++ +|++..+++.+.+.+.++..++++++|+++||++||||++.+
T Consensus 5 ~~~~p~~~~~l~~~~~~~~~~~~~~~~~L~~yl~~~~~lg~s~~~ag~~~~~~~~~~~~~~~~~G~laDr~~G~~~~l~~ 84 (475)
T TIGR00924 5 FFGHPKPLFTLFFVELWERFSYYGMQGILAVYLVQQAGLGFSQEQAFIIFGAYSALVYLLTSVGWWFGDRVWGTKKTMVL 84 (475)
T ss_pred ccCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHhhcchHHHHHH
Confidence 4679999988888888 7 9999999999999988 999999999999999999999999999999996699999999
Q ss_pred HHHHHHHHHHHHHhhccccCCCCCccCCCCcCcCCCCchhhHHHHHHHHHHHHhhchhhhhhhhhhhccCCCc--cchhh
Q 045564 124 SSFISLLGTILLDSTATFDSLRPQRCDIGLSLCKAPSKVQFAVLYSGIALACLGLGGLRFTLATMGANQFEIP--QHQGI 201 (296)
Q Consensus 124 ~~~l~~ig~~~la~~~~~p~~~~~~c~~~~~~~~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~~~ad~f~~~--~~r~~ 201 (296)
+.++..+++++++++. +...+++++++.++|.|..+++..++++|++|++ .+|++
T Consensus 85 ~~~~~~~g~~~~~~~~-----------------------~~~~~~~~~~l~g~g~g~~~~~~~~~~a~~~~~~~~~~r~~ 141 (475)
T TIGR00924 85 GGIVLMLGHFMLAMSI-----------------------YPDLIFYGLGTIAVGSGLFKANPSSMVGKLYERGDMPRRDG 141 (475)
T ss_pred HHHHHHHHHHHHHhcc-----------------------cHhHHHHHHHHHHhccccccCCHHHHHHHhcCCCCcccccc
Confidence 9999999988776542 2346777889999999999999999999999843 35888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhccccchhhHHHHHHHHHHHHHHHHhCCCch
Q 045564 202 FFNWFFILTYASTVISSAAFVYIEDNLSWRLGSGLNIAANLAGVVIFLSGKHFY 255 (296)
Q Consensus 202 ~f~~~y~~~~iG~~i~p~v~~~l~~~~gw~~~F~i~~~~~~~~~~~~~~~~~~~ 255 (296)
+++++|++.|+|+.+||.+++++.+++||++.|++.++.+++++++++..++.+
T Consensus 142 ~~~~~~~~~niG~~ig~~l~g~l~~~~g~~~~f~~~~~~~~~~~l~~~~~~~~~ 195 (475)
T TIGR00924 142 GFTLFYMSINIGSFISPLLAGVIAENYGYHVGFNLAAVGMVIGLLTFFAGRHML 195 (475)
T ss_pred eehhHHHHHHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHccccc
Confidence 999999999999999999999999989999999998887777766665555433
No 6
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=99.89 E-value=5.2e-22 Score=199.62 Aligned_cols=188 Identities=25% Similarity=0.433 Sum_probs=161.9
Q ss_pred hHHHhHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhcchHHHHHHHHHHHHHHHHHHHhhccccCCC
Q 045564 66 LGEGWVANLMVYMIQEFHITSINSALISNIVNGFVNLFPVLGAIIADSFLGSFQVIWISSFISLLGTILLDSTATFDSLR 145 (296)
Q Consensus 66 ~~y~~~~~l~~yl~~~lg~s~~~a~~i~~~~~~~~~~~~l~~G~laDr~iGR~~~i~i~~~l~~ig~~~la~~~~~p~~~ 145 (296)
+|||+.+.+..|+++.+|++.+.+..+...+....++.+++||+++|+++||++++.++.+++.+|++++++++ .|...
T Consensus 2 syYGm~aiLvlYl~~~lg~~~~~A~~i~~~f~~l~yl~pilGg~iAD~~lG~~~tIl~~~ii~~lG~~llai~a-~~~~~ 80 (654)
T TIGR00926 2 SYYGMRTILVLYFLNFLGFSESTSTVLFHTFTYLCYLTPLIGAIIADGWLGKFKTILYLSIVYVVGHALLSFGA-IPSSG 80 (654)
T ss_pred ceeecHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhcc-Ccccc
Confidence 58999999999999999999999999999999999999999999999999999999999999999999998765 22210
Q ss_pred CCccCCCCcCcCCCCchhhHHHHHHHHHHHHhhchhhhhhhhhhhccCCC--ccchhhHHHHHHHHHHHHHHHHHHHHHh
Q 045564 146 PQRCDIGLSLCKAPSKVQFAVLYSGIALACLGLGGLRFTLATMGANQFEI--PQHQGIFFNWFFILTYASTVISSAAFVY 223 (296)
Q Consensus 146 ~~~c~~~~~~~~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~~~ad~f~~--~~~r~~~f~~~y~~~~iG~~i~p~v~~~ 223 (296)
...+...++++++++++|.|+++|+..++.+|||++ +++|.++|+|+|+++|+|+++++++.++
T Consensus 81 --------------~~~~~~~~l~gLaLia~G~GgiKp~vsaf~gdqf~~~~~~~~~s~F~~fY~~iNiGSlis~~i~~~ 146 (654)
T TIGR00926 81 --------------HPLHDLLDLLGLALIALGTGGIKPCVSAFGGDQFEERQLSLRSRFFSFFYFAINAGSLISTIITPI 146 (654)
T ss_pred --------------cchHHHHHHHHHHHHHhhccccccCchhhhHhhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 012334577889999999999999999999999983 3358999999999999999999999999
Q ss_pred hhccc-------cchhhHHHHHHHHHHHHHHHHhCCCchh-------------HHHHHHHhcCCC
Q 045564 224 IEDNL-------SWRLGSGLNIAANLAGVVIFLSGKHFYF-------------PVIVASVKKWKP 268 (296)
Q Consensus 224 l~~~~-------gw~~~F~i~~~~~~~~~~~~~~~~~~~~-------------~v~~~~~~~~~~ 268 (296)
++++. +|.++|.+++++++++++++...+|+|+ ++++.+.|+++.
T Consensus 147 l~~~~~~fg~~~~~~~aF~i~~i~m~ia~lvf~~g~k~y~~~~p~gs~l~~v~~vi~~a~~~~~~ 211 (654)
T TIGR00926 147 LRGDVGCFGCQDCYPLAFGVPAILMILALIVFMAGSKMYKKKPPKGNIVSKVIKCIVTALRKRFS 211 (654)
T ss_pred HHHhhcccccCcchHHHHHHHHHHHHHHHHHHHHhccccCCCCCCccHHHHHHHHHHHHHHHhhc
Confidence 98543 6999999999999999999988877764 455667766543
No 7
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=99.89 E-value=8.8e-22 Score=193.23 Aligned_cols=181 Identities=17% Similarity=0.250 Sum_probs=154.5
Q ss_pred ccCCchhHHHHHHHHH--H-hHHHhHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhcchHHHHHHHH
Q 045564 49 KRGGRTALLSRTVTCL--T-LGEGWVANLMVYMIQEFHITSINSALISNIVNGFVNLFPVLGAIIADSFLGSFQVIWISS 125 (296)
Q Consensus 49 ~~~~~~~~~~l~~~~~--~-~~y~~~~~l~~yl~~~lg~s~~~a~~i~~~~~~~~~~~~l~~G~laDr~iGR~~~i~i~~ 125 (296)
..+|+|.++.+++.++ + ++|++..+++.|+++++|++..+++++.+.+....+..++++|+++||++|||+++.++.
T Consensus 16 ~~~~p~~~~~~~~~~~~~~~~~y~~~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~~~~G~LaDr~~G~r~~~~~g~ 95 (500)
T PRK09584 16 AFKQPKAFYLIFSIELWERFGYYGLQGIMAVYLVKQLGMSEADSITLFSSFSALVYGLVAIGGWLGDKVLGTKRVIMLGA 95 (500)
T ss_pred hhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHH
Confidence 4568888888888887 8 999999999999999999999999998888888888888899999999559999999999
Q ss_pred HHHHHHHHHHHhhccccCCCCCccCCCCcCcCCCCchhhHHHHHHHHHHHHhhchhhhhhhhhhhccCCC-ccchhhHHH
Q 045564 126 FISLLGTILLDSTATFDSLRPQRCDIGLSLCKAPSKVQFAVLYSGIALACLGLGGLRFTLATMGANQFEI-PQHQGIFFN 204 (296)
Q Consensus 126 ~l~~ig~~~la~~~~~p~~~~~~c~~~~~~~~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~~~ad~f~~-~~~r~~~f~ 204 (296)
++..+|+++++++. .....+++++++.++|.|...++..++++|+||+ +++|+.+++
T Consensus 96 ~~~~ig~~l~~~~~----------------------~~~~~l~~~~~l~gig~g~~~~~~~~l~~~~f~~~~~~~~~~~~ 153 (500)
T PRK09584 96 IVLAIGYALVAWSG----------------------HDAGIVYMGMATIAVGNGLFKANPSSLLSTCYEKDDPRLDGAFT 153 (500)
T ss_pred HHHHHHHHHHHHhc----------------------ccHHHHHHHHHHHHHhhhcccCCHHHHHHHhcCCCchhhhhcch
Confidence 99999887776542 1124567788899999999999999999999984 345667899
Q ss_pred HHHHHHHHHHHHHHHHHHhhhccccchhhHHHHHHHHHHHHHHHHhC
Q 045564 205 WFFILTYASTVISSAAFVYIEDNLSWRLGSGLNIAANLAGVVIFLSG 251 (296)
Q Consensus 205 ~~y~~~~iG~~i~p~v~~~l~~~~gw~~~F~i~~~~~~~~~~~~~~~ 251 (296)
++|++.|+|+.+||.+++++.+++|||+.|++.++.++++++.++..
T Consensus 154 ~~~~~~~iG~~~gp~i~g~l~~~~g~~~~F~i~~i~~~i~~i~~~~~ 200 (500)
T PRK09584 154 MYYMSINIGSFFSMLATPWLAAKYGWSVAFALSVVGMLITVVNFAFC 200 (500)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999988777766555443
No 8
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=99.75 E-value=8.1e-17 Score=157.63 Aligned_cols=172 Identities=8% Similarity=0.027 Sum_probs=139.8
Q ss_pred chhHHHHHHHHH-H-hHHHhHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhcchHHHHHHHHHHHHH
Q 045564 53 RTALLSRTVTCL-T-LGEGWVANLMVYMIQEFHITSINSALISNIVNGFVNLFPVLGAIIADSFLGSFQVIWISSFISLL 130 (296)
Q Consensus 53 ~~~~~~l~~~~~-~-~~y~~~~~l~~yl~~~lg~s~~~a~~i~~~~~~~~~~~~l~~G~laDr~iGR~~~i~i~~~l~~i 130 (296)
|..+..+++..+ . ..-.+.....+.+.+++|.+..+.+++.+.+.++...+.+++|+++|| +|||+++.++.+++.+
T Consensus 5 ~~~~~~~~~~~~~~~ld~tiv~~a~p~i~~~l~~s~~~~~~~~~~~~l~~~~~~~~~G~l~D~-~Grk~~l~~~~~~~~~ 83 (495)
T PRK14995 5 WLTLVIIVLVYIPVAIDATVLHVAAPTLSMTLGASGNELLWIIDIYSLVMAGMVLPMGALGDR-IGFKRLLMLGGTLFGL 83 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHH-hccHHHHHHHHHHHHH
Confidence 444444444444 3 333333444445678999999999999999999999999999999999 7999999999999999
Q ss_pred HHHHHHhhccccCCCCCccCCCCcCcCCCCchhhHHHHHHHHHHHHhhchhhhhhhhhhhccCCCccchhhHHHHHHHHH
Q 045564 131 GTILLDSTATFDSLRPQRCDIGLSLCKAPSKVQFAVLYSGIALACLGLGGLRFTLATMGANQFEIPQHQGIFFNWFFILT 210 (296)
Q Consensus 131 g~~~la~~~~~p~~~~~~c~~~~~~~~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~~~ad~f~~~~~r~~~f~~~y~~~ 210 (296)
+.++++++. +...++++|++.|+|.+...+.....+.+.++++++|+.+++++....
T Consensus 84 ~~~~~~~a~-----------------------~~~~li~~r~l~G~g~~~~~~~~~~~l~~~~~~~~~r~~~~g~~~~~~ 140 (495)
T PRK14995 84 ASLAAAFSP-----------------------TASWLIATRALLAIGAAMIVPATLAGIRATFTEEKQRNMALGVWAAVG 140 (495)
T ss_pred HHHHHHHcC-----------------------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHH
Confidence 988876542 356789999999999999888888888787754557999999999999
Q ss_pred HHHHHHHHHHHHhhhccccchhhHHHHHHHHHHHHHHH
Q 045564 211 YASTVISSAAFVYIEDNLSWRLGSGLNIAANLAGVVIF 248 (296)
Q Consensus 211 ~iG~~i~p~v~~~l~~~~gw~~~F~i~~~~~~~~~~~~ 248 (296)
++|..+||.+++++.+..||||.|++...+.++.+++.
T Consensus 141 ~~g~~~gp~lgg~l~~~~gwr~~f~i~~~~~~~~~~l~ 178 (495)
T PRK14995 141 SGGAAFGPLVGGILLEHFYWGSVFLINVPIVLVVMGLT 178 (495)
T ss_pred HHHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999877655554443
No 9
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=99.73 E-value=2.4e-16 Score=150.82 Aligned_cols=168 Identities=11% Similarity=-0.019 Sum_probs=137.3
Q ss_pred CchhHHHHHHHHH-H-hHHHhHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhcchHHHHHHHHHHHH
Q 045564 52 GRTALLSRTVTCL-T-LGEGWVANLMVYMIQEFHITSINSALISNIVNGFVNLFPVLGAIIADSFLGSFQVIWISSFISL 129 (296)
Q Consensus 52 ~~~~~~~l~~~~~-~-~~y~~~~~l~~yl~~~lg~s~~~a~~i~~~~~~~~~~~~l~~G~laDr~iGR~~~i~i~~~l~~ 129 (296)
+|+....+++..+ . ............+.+++|++..+.+++.+++.++..++.++.|+++|| +|||+++.++.+++.
T Consensus 6 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr-~G~r~~~~~~~~~~~ 84 (412)
T TIGR02332 6 FRRLIIFLFILFIFSFLDRINIGFAGLTMGKDLGLSATMFGLAATLFYAAYVICGIPSNIMLAI-IGARRWIAGIMVLWG 84 (412)
T ss_pred hhHHHHHHHHHHHHHHhhhhhHHHHHHhhHhhcCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHH-hChHHHHHHHHHHHH
Confidence 4554444444433 2 333334455568899999999999999999999999999999999999 799999999999999
Q ss_pred HHHHHHHhhccccCCCCCccCCCCcCcCCCCchhhHHHHHHHHHHHHhhchhhhhhhhhhhccCCCccchhhHHHHHHHH
Q 045564 130 LGTILLDSTATFDSLRPQRCDIGLSLCKAPSKVQFAVLYSGIALACLGLGGLRFTLATMGANQFEIPQHQGIFFNWFFIL 209 (296)
Q Consensus 130 ig~~~la~~~~~p~~~~~~c~~~~~~~~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~~~ad~f~~~~~r~~~f~~~y~~ 209 (296)
++.++.+++. +...++++|++.|++.+...+....++.|.+|+ ++|+...++++.+
T Consensus 85 ~~~~~~~~~~-----------------------~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~-~~rg~~~~~~~~~ 140 (412)
T TIGR02332 85 IASTATMFAT-----------------------GPESLYLLRILVGIAEAGFLPGILLYLTFWFPA-YFRARANALFMIA 140 (412)
T ss_pred HHHHHHHHhc-----------------------CHHHHHHHHHHHHHHHhhHHHHHHHHHHHHcCH-HHHHHHHHHHHHH
Confidence 8888776542 346788999999999999999888999999994 4689999999999
Q ss_pred HHHHHHHHHHHHHhhhc------cccchhhHHHHHHHHHHH
Q 045564 210 TYASTVISSAAFVYIED------NLSWRLGSGLNIAANLAG 244 (296)
Q Consensus 210 ~~iG~~i~p~v~~~l~~------~~gw~~~F~i~~~~~~~~ 244 (296)
.++|..+++.+++++.+ ..|||+.|++.++..++.
T Consensus 141 ~~~g~~~~~~~~~~l~~~~~~~~~~gwr~~f~~~~~~~l~~ 181 (412)
T TIGR02332 141 MPVTMALGLILSGYILALDGLMALKGWQWLFLLEGFPSVIL 181 (412)
T ss_pred HHHHHHHHHHHHHHHHhCCCCCCccchhHHHHHHHHHHHHH
Confidence 99999999999998864 369999999977755443
No 10
>PRK03545 putative arabinose transporter; Provisional
Probab=99.73 E-value=2.9e-16 Score=148.46 Aligned_cols=170 Identities=12% Similarity=0.070 Sum_probs=137.7
Q ss_pred CchhHHHHHHHHH--H-hHHHhHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhcchHHHHHHHHHHH
Q 045564 52 GRTALLSRTVTCL--T-LGEGWVANLMVYMIQEFHITSINSALISNIVNGFVNLFPVLGAIIADSFLGSFQVIWISSFIS 128 (296)
Q Consensus 52 ~~~~~~~l~~~~~--~-~~y~~~~~l~~yl~~~lg~s~~~a~~i~~~~~~~~~~~~l~~G~laDr~iGR~~~i~i~~~l~ 128 (296)
+|..++.+....+ . ..+. ...+...+.+++|.+..+.+++.+.+..+..++.++.|+++|| +||||++.++.++.
T Consensus 7 ~~~~~~~l~~~~~~~~~~~~~-~~~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr-~g~r~~~~~~~~~~ 84 (390)
T PRK03545 7 AWLRVVTLALAAFIFNTTEFV-PVGLLSDIAQSFHMQTAQVGLMLTIYAWVVALMSLPLMLLTSN-VERRKLLIGLFVLF 84 (390)
T ss_pred chHHHHHHHHHHHHHHhHHHH-HHcchHHHHhHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcC-CChHHHHHHHHHHH
Confidence 4444444444334 3 3332 2333456778999999999999999999999999999999999 79999999999999
Q ss_pred HHHHHHHHhhccccCCCCCccCCCCcCcCCCCchhhHHHHHHHHHHHHhhchhhhhhhhhhhccCCCccchhhHHHHHHH
Q 045564 129 LLGTILLDSTATFDSLRPQRCDIGLSLCKAPSKVQFAVLYSGIALACLGLGGLRFTLATMGANQFEIPQHQGIFFNWFFI 208 (296)
Q Consensus 129 ~ig~~~la~~~~~p~~~~~~c~~~~~~~~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~~~ad~f~~~~~r~~~f~~~y~ 208 (296)
.++.+...+.. +...++++|++.|++.+...+...+++.|.+|+ ++|++.++++..
T Consensus 85 ~~~~~~~~~~~-----------------------~~~~l~~~r~~~G~~~~~~~~~~~~~i~~~~~~-~~r~~~~g~~~~ 140 (390)
T PRK03545 85 IASHVLSALAW-----------------------NFTVLLISRIGIAFAHAIFWSITASLAIRVAPA-GKKAQALSLLAT 140 (390)
T ss_pred HHHHHHHHHhc-----------------------cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCh-hhhhhHHHHHHH
Confidence 88877765542 356788899999999998889999999999984 478999999999
Q ss_pred HHHHHHHHHHHHHHhhhccccchhhHHHHHHHHHHHHHH
Q 045564 209 LTYASTVISSAAFVYIEDNLSWRLGSGLNIAANLAGVVI 247 (296)
Q Consensus 209 ~~~iG~~i~p~v~~~l~~~~gw~~~F~i~~~~~~~~~~~ 247 (296)
+.++|..++|.+++.+.+..|||+.|++.++..++..+.
T Consensus 141 ~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~~~~l~~~~ 179 (390)
T PRK03545 141 GTALAMVLGLPLGRVIGQYLGWRTTFLAIGGGALITLLL 179 (390)
T ss_pred HHHHHHHHHhhHHHHHHHHhcHHHHHHHHHHHHHHHHHH
Confidence 999999999999999998899999999988766554433
No 11
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.72 E-value=1.1e-15 Score=143.40 Aligned_cols=172 Identities=13% Similarity=0.092 Sum_probs=139.6
Q ss_pred cCCchhHHHHHHHHH-H-hHHHhHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhcchHHHHHHHHHH
Q 045564 50 RGGRTALLSRTVTCL-T-LGEGWVANLMVYMIQEFHITSINSALISNIVNGFVNLFPVLGAIIADSFLGSFQVIWISSFI 127 (296)
Q Consensus 50 ~~~~~~~~~l~~~~~-~-~~y~~~~~l~~yl~~~lg~s~~~a~~i~~~~~~~~~~~~l~~G~laDr~iGR~~~i~i~~~l 127 (296)
+.+|+.....++..+ . ............+.+++|++..+.+++.+++..+..++.++.|+++|| +|||+++.++.++
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr-~g~r~~~~~~~~~ 86 (405)
T TIGR00891 8 RAQWNAFSAAWLGWLLDAFDFFLVALVLAEVAGEFGLTTVDAASLISAALISRWFGALMFGLWGDR-YGRRLPMVTSIVL 86 (405)
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhhHHHHHHHHHHHHHHHHHHHHHHHHH-hccHHHHHHHHHH
Confidence 456666555555555 3 333344555567788999999999999999999999999999999999 7999999999988
Q ss_pred HHHHHHHHHhhccccCCCCCccCCCCcCcCCCCchhhHHHHHHHHHHHHhhchhhhhhhhhhhccCCCccchhhHHHHHH
Q 045564 128 SLLGTILLDSTATFDSLRPQRCDIGLSLCKAPSKVQFAVLYSGIALACLGLGGLRFTLATMGANQFEIPQHQGIFFNWFF 207 (296)
Q Consensus 128 ~~ig~~~la~~~~~p~~~~~~c~~~~~~~~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~~~ad~f~~~~~r~~~f~~~y 207 (296)
..++.+++.+.. +...+++.|++.|++.+...+...+++.|.+|+ ++|+...+++.
T Consensus 87 ~~~~~~~~~~~~-----------------------~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~~ 142 (405)
T TIGR00891 87 FSAGTLACGFAP-----------------------GYITMFIARLVIGIGMGGEYGSSAAYVIESWPK-HLRNKASGLLI 142 (405)
T ss_pred HHHHHHHHHHhc-----------------------cHHHHHHHHHHHHhhhhhhhHHHHHHHHHhCCh-hhhhHHHHHHH
Confidence 888777665432 346788899999999999999999999999984 47899999999
Q ss_pred HHHHHHHHHHHHHHHhhhcccc--chhhHHHHHHHHHHHHH
Q 045564 208 ILTYASTVISSAAFVYIEDNLS--WRLGSGLNIAANLAGVV 246 (296)
Q Consensus 208 ~~~~iG~~i~p~v~~~l~~~~g--w~~~F~i~~~~~~~~~~ 246 (296)
.+.++|..+++.+.+.+.+..+ ||+.|++.++..++.++
T Consensus 143 ~~~~~g~~~~~~l~~~l~~~~~~~w~~~f~~~~~~~~~~~~ 183 (405)
T TIGR00891 143 SGYAVGAVVAAQVYSLVVPVWGDGWRALFFISILPIIFALW 183 (405)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHH
Confidence 9999999999999998887665 99999987665554443
No 12
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=99.72 E-value=8.7e-16 Score=146.11 Aligned_cols=172 Identities=15% Similarity=0.107 Sum_probs=141.4
Q ss_pred ccCCchhHHHHHHHHH--H-hHHHhHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhcchHHHHHHHH
Q 045564 49 KRGGRTALLSRTVTCL--T-LGEGWVANLMVYMIQEFHITSINSALISNIVNGFVNLFPVLGAIIADSFLGSFQVIWISS 125 (296)
Q Consensus 49 ~~~~~~~~~~l~~~~~--~-~~y~~~~~l~~yl~~~lg~s~~~a~~i~~~~~~~~~~~~l~~G~laDr~iGR~~~i~i~~ 125 (296)
++..|+.+..+.+..+ . ..|.....++. +.+++|.+..+.++.++.+..+..++.++.|+++|| +||||.+.++.
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr-~grr~~~~~~~ 92 (394)
T PRK10213 15 TRPNWSAVFSVAFCVACLIIVEFLPVSLLTP-MAQDLGISEGVAGQSVTVTAFVAMFASLFITQTIQA-TDRRYVVILFA 92 (394)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHhhHHH-HHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcc-cCcHHHHHHHH
Confidence 3446766555555444 3 44444444544 567899999999999999999999999999999999 79999999999
Q ss_pred HHHHHHHHHHHhhccccCCCCCccCCCCcCcCCCCchhhHHHHHHHHHHHHhhchhhhhhhhhhhccCCCccchhhHHHH
Q 045564 126 FISLLGTILLDSTATFDSLRPQRCDIGLSLCKAPSKVQFAVLYSGIALACLGLGGLRFTLATMGANQFEIPQHQGIFFNW 205 (296)
Q Consensus 126 ~l~~ig~~~la~~~~~p~~~~~~c~~~~~~~~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~~~ad~f~~~~~r~~~f~~ 205 (296)
++..++.+++..+. +.+.+++.|++.|++.|...+...+++.|.+|++ +|+.+.++
T Consensus 93 ~~~~~~~~~~~~~~-----------------------~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~-~~~~a~~~ 148 (394)
T PRK10213 93 VLLTLSCLLVSFAN-----------------------SFSLLLIGRACLGLALGGFWAMSASLTMRLVPPR-TVPKALSV 148 (394)
T ss_pred HHHHHHHHHHHHHC-----------------------hHHHHHHHHHHHHHhhHHHHHHHHHHHHHHcCHh-HHHHHHHH
Confidence 99988877665432 4578899999999999999999999999999844 78999999
Q ss_pred HHHHHHHHHHHHHHHHHhhhccccchhhHHHHHHHHHHHHH
Q 045564 206 FFILTYASTVISSAAFVYIEDNLSWRLGSGLNIAANLAGVV 246 (296)
Q Consensus 206 ~y~~~~iG~~i~p~v~~~l~~~~gw~~~F~i~~~~~~~~~~ 246 (296)
+..+.++|..++|.+++++.+.+|||+.|++.++..++..+
T Consensus 149 ~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~l~~~~~l 189 (394)
T PRK10213 149 IFGAVSIALVIAAPLGSFLGELIGWRNVFNAAAVMGVLCIF 189 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999989999999998775554443
No 13
>PRK10054 putative transporter; Provisional
Probab=99.71 E-value=7.9e-16 Score=146.44 Aligned_cols=170 Identities=12% Similarity=0.044 Sum_probs=138.7
Q ss_pred CchhHHHHHHHHH--H-hHHHhHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhcchHHHHHHHHHHH
Q 045564 52 GRTALLSRTVTCL--T-LGEGWVANLMVYMIQEFHITSINSALISNIVNGFVNLFPVLGAIIADSFLGSFQVIWISSFIS 128 (296)
Q Consensus 52 ~~~~~~~l~~~~~--~-~~y~~~~~l~~yl~~~lg~s~~~a~~i~~~~~~~~~~~~l~~G~laDr~iGR~~~i~i~~~l~ 128 (296)
.+|....++...+ . +++....+++.|+++++|++..+.+++.+++.+...++.++.|+++|| +|||+++.++.++.
T Consensus 5 ~~~~~~~l~~~~~~~~~g~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr-~g~k~~~~~~~~~~ 83 (395)
T PRK10054 5 LRRSTSALLASSLLLTIGRGATLPFMTIYLSRQYSLSVDLIGYAMTIALTIGVVFSLGFGILADK-FDKKRYMLLAITAF 83 (395)
T ss_pred CCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhh-cCcchhHHHHHHHH
Confidence 3444555555455 5 677778889999999999999999999999999999999999999999 79999999999888
Q ss_pred HHHHHHHHhhccccCCCCCccCCCCcCcCCCCchhhHHHHHHHHHHHHhhchhhhhhhhhhhccCCCccchhhHHHHHHH
Q 045564 129 LLGTILLDSTATFDSLRPQRCDIGLSLCKAPSKVQFAVLYSGIALACLGLGGLRFTLATMGANQFEIPQHQGIFFNWFFI 208 (296)
Q Consensus 129 ~ig~~~la~~~~~p~~~~~~c~~~~~~~~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~~~ad~f~~~~~r~~~f~~~y~ 208 (296)
.++.+++.+.. +...+++.+.+.+.+.+...+...+..+|.+|++ +|++.+++.+.
T Consensus 84 ~~~~~~~~~~~-----------------------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~g~~~~ 139 (395)
T PRK10054 84 ASGFIAIPLVN-----------------------NVTLVVLFFALINCAYSVFSTVLKAWFADNLSST-SKTKIFSLNYT 139 (395)
T ss_pred HHHHHHHHHHh-----------------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHh-HHHHHHHHHHH
Confidence 88776655432 2345666677777777777888899999999844 78999999999
Q ss_pred HHHHHHHHHHHHHHhhhccccchhhHHHHHHHHHHHHHH
Q 045564 209 LTYASTVISSAAFVYIEDNLSWRLGSGLNIAANLAGVVI 247 (296)
Q Consensus 209 ~~~iG~~i~p~v~~~l~~~~gw~~~F~i~~~~~~~~~~~ 247 (296)
..++|..++|.+++++.+ .+|+..|++.+++.+++++.
T Consensus 140 ~~~lg~~igp~l~~~l~~-~g~~~~f~~~~~~~~i~~i~ 177 (395)
T PRK10054 140 MLNIGWTVGPPLGTLLVM-QSINLPFWLAAICSAFPLVF 177 (395)
T ss_pred HHHHHHHHHHHHHHHHHH-hccCcHHHHHHHHHHHHHHH
Confidence 999999999999999875 69999999888766665443
No 14
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=99.70 E-value=6.9e-17 Score=152.61 Aligned_cols=144 Identities=33% Similarity=0.624 Sum_probs=118.1
Q ss_pred HHHHHHHHHHHHHHHHHHHhhccccCCCCCccCCCCcCcCCCCchhhHHHHHHHHHHHHhhchhhhhhhhhhhccCCC--
Q 045564 118 FQVIWISSFISLLGTILLDSTATFDSLRPQRCDIGLSLCKAPSKVQFAVLYSGIALACLGLGGLRFTLATMGANQFEI-- 195 (296)
Q Consensus 118 ~~~i~i~~~l~~ig~~~la~~~~~p~~~~~~c~~~~~~~~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~~~ad~f~~-- 195 (296)
+|++.++.+++.+|++++++++ .|... +++.+...++++++++++|.|+.+|++.++++|||++
T Consensus 1 yktI~~g~~~~~~G~~ll~l~~-~~~~~-------------~~~~~~~~~~~gL~lia~G~G~~K~ni~~~~~dq~~~~~ 66 (372)
T PF00854_consen 1 YKTILLGSIVYLLGHVLLTLSA-IPPSL-------------PSGIQLGLFYIGLALIAVGTGGIKPNISPFGADQYDEDD 66 (372)
T ss_dssp HHHHHHHHHHHHHHHHH--HHH-TSSSC-------------------CHHHHHHHHHHHHHHCCHHHHHHHHHHCSSTTT
T ss_pred CHhhhHHHHHHHHHHHHhHHHH-hcchh-------------hhhHHHHHHHHHHHHHHhccccccccHHHHHHHHhcccc
Confidence 5899999999999999988887 33321 1223567899999999999999999999999999983
Q ss_pred ccchhhHHHHHHHHHHHHHHHHHHHHHhhhccccchhhHHHHHHHHHHHHHHHHhCCCchh---------------HHHH
Q 045564 196 PQHQGIFFNWFFILTYASTVISSAAFVYIEDNLSWRLGSGLNIAANLAGVVIFLSGKHFYF---------------PVIV 260 (296)
Q Consensus 196 ~~~r~~~f~~~y~~~~iG~~i~p~v~~~l~~~~gw~~~F~i~~~~~~~~~~~~~~~~~~~~---------------~v~~ 260 (296)
+++|.++|+|||+++|+|+.+++.+.+|+++++||.++|+++.+++++++++++.++++|+ .+++
T Consensus 67 ~~~~~~~F~~fY~~in~G~~~~~~~~~~i~~~~~~~~~f~i~~~~~~~~~~~f~~~~~~y~~~~~~~~~~~~~~~~~~~~ 146 (372)
T PF00854_consen 67 DSRRDSFFNWFYWGINIGSLFSPTLVPYIQQNYGWFLGFGIPAIGMLLALIVFLSGRKRYRKVAPPGGSPLTNFIKLVLV 146 (372)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCS-HHHHHHHHHHHHHHHHHHHHCCCCTT--S-----S--S--SHHHHH
T ss_pred hhhhhhhHHHHHHHHhhhhHhhcccchhhccccchhhhhhHHHHHHHHHHHHHHhCCcCCcCcCccCCcccchhHHHHHH
Confidence 5689999999999999999999999999999999999999999999999999999988876 5667
Q ss_pred HHHhcCCCcCCCCch
Q 045564 261 ASVKKWKPVLSSRSE 275 (296)
Q Consensus 261 ~~~~~~~~~~~~~~~ 275 (296)
++.|+++...|++..
T Consensus 147 ~~~~~~~~~~~~~~~ 161 (372)
T PF00854_consen 147 AAFKKRKLAVPKGSS 161 (372)
T ss_dssp HHHHHHCCCH-HHHH
T ss_pred HHHHHhhcccccchH
Confidence 888888887765433
No 15
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=99.69 E-value=9.4e-16 Score=148.18 Aligned_cols=155 Identities=14% Similarity=0.127 Sum_probs=133.6
Q ss_pred HHhHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhcchHHHHHHHHHHHHHHHHHHHhhccccCCCCC
Q 045564 68 EGWVANLMVYMIQEFHITSINSALISNIVNGFVNLFPVLGAIIADSFLGSFQVIWISSFISLLGTILLDSTATFDSLRPQ 147 (296)
Q Consensus 68 y~~~~~l~~yl~~~lg~s~~~a~~i~~~~~~~~~~~~l~~G~laDr~iGR~~~i~i~~~l~~ig~~~la~~~~~p~~~~~ 147 (296)
..+.....+.+.+++|.+..+.+++.+.+.++..++.++.|+++|| +|||+++.++.++..++.+++..+.
T Consensus 18 ~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr-~g~r~~~~~~~~~~~~~~~~~~~~~-------- 88 (485)
T TIGR00711 18 STIVNVAIPTIAGDLGSSLSQVQWVITSYMLANAISIPLTGWLAKR-FGTRRLFLISTFAFTLGSLLCGVAP-------- 88 (485)
T ss_pred HHHHHHHHHHHHHhcCCChhhhhHHHHHHHHHHHHHHHhHHHHHHH-hCcHHHHHHHHHHHHHHHHHHhCcC--------
Confidence 3344455567778999999999999999999999999999999999 7999999999999998887765432
Q ss_pred ccCCCCcCcCCCCchhhHHHHHHHHHHHHhhchhhhhhhhhhhccCCCccchhhHHHHHHHHHHHHHHHHHHHHHhhhcc
Q 045564 148 RCDIGLSLCKAPSKVQFAVLYSGIALACLGLGGLRFTLATMGANQFEIPQHQGIFFNWFFILTYASTVISSAAFVYIEDN 227 (296)
Q Consensus 148 ~c~~~~~~~~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~~~ad~f~~~~~r~~~f~~~y~~~~iG~~i~p~v~~~l~~~ 227 (296)
+...++++|++.|++.+...+...+++.|.+|+ ++|+.++++++....+|..++|.+++++.++
T Consensus 89 ---------------~~~~l~~~~~~~G~~~~~~~~~~~~~i~~~~~~-~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~ 152 (485)
T TIGR00711 89 ---------------NLELMIIFRVIQGFGGGPLIPLSFSTLLNIYPP-EKRGRAMAIWGLTVLVAPALGPTLGGWIIEN 152 (485)
T ss_pred ---------------CHHHHHHHHHHHHhhhhhHHHHHHHHHHHHCCH-HHHHHHHHHHHHHHHHHhhhhhccHhHhccC
Confidence 346788999999999999999999999999984 4789999999999999999999999999999
Q ss_pred ccchhhHHHHHHHHHHHHHH
Q 045564 228 LSWRLGSGLNIAANLAGVVI 247 (296)
Q Consensus 228 ~gw~~~F~i~~~~~~~~~~~ 247 (296)
+|||+.|++.++..++..++
T Consensus 153 ~~w~~~f~~~~~~~~~~~~~ 172 (485)
T TIGR00711 153 YHWRWIFLINVPIGIIVVVV 172 (485)
T ss_pred cCceehhhhhhHHHHHHHHH
Confidence 99999999987765554443
No 16
>PRK10504 putative transporter; Provisional
Probab=99.69 E-value=1.8e-15 Score=146.31 Aligned_cols=169 Identities=11% Similarity=0.057 Sum_probs=136.5
Q ss_pred hHHHHHHHHH--H-hHHHhHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhcchHHHHHHHHHHHHHH
Q 045564 55 ALLSRTVTCL--T-LGEGWVANLMVYMIQEFHITSINSALISNIVNGFVNLFPVLGAIIADSFLGSFQVIWISSFISLLG 131 (296)
Q Consensus 55 ~~~~l~~~~~--~-~~y~~~~~l~~yl~~~lg~s~~~a~~i~~~~~~~~~~~~l~~G~laDr~iGR~~~i~i~~~l~~ig 131 (296)
..+.+.+..+ . ..+.+...++.|. +++|.+..+.+++.+.+.++..++.+++|+++|| +||||++..+.++..++
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~p~~~-~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~-~g~r~~~~~~~~~~~~~ 88 (471)
T PRK10504 11 QLWIVAFGFFMQSLDTTIVNTALPSMA-QSLGESPLHMHMVIVSYVLTVAVMLPASGWLADR-VGVRNIFFTAIVLFTLG 88 (471)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHH-HHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hchHHHHHHHHHHHHHH
Confidence 3444444444 3 4444555666665 5799999999999999999999999999999999 79999999998888887
Q ss_pred HHHHHhhccccCCCCCccCCCCcCcCCCCchhhHHHHHHHHHHHHhhchhhhhhhhhhhccCCCccchhhHHHHHHHHHH
Q 045564 132 TILLDSTATFDSLRPQRCDIGLSLCKAPSKVQFAVLYSGIALACLGLGGLRFTLATMGANQFEIPQHQGIFFNWFFILTY 211 (296)
Q Consensus 132 ~~~la~~~~~p~~~~~~c~~~~~~~~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~~~ad~f~~~~~r~~~f~~~y~~~~ 211 (296)
.+++.++. +...++++|++.|++.+...+...+.+.|.+| +++|++.+++++...+
T Consensus 89 ~~~~~~~~-----------------------~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 144 (471)
T PRK10504 89 SLFCALSG-----------------------TLNELLLARVLQGVGGAMMVPVGRLTVMKIVP-REQYMAAMTFVTLPGQ 144 (471)
T ss_pred HHHHHHhC-----------------------CHHHHHHHHHHHHhhhHHHHHHHHHHHHHHcC-HHHHHHHHHHHHHHHH
Confidence 76654331 24567888999999999999999999999998 4478899999999999
Q ss_pred HHHHHHHHHHHhhhccccchhhHHHHHHHHHHHHHHHH
Q 045564 212 ASTVISSAAFVYIEDNLSWRLGSGLNIAANLAGVVIFL 249 (296)
Q Consensus 212 iG~~i~p~v~~~l~~~~gw~~~F~i~~~~~~~~~~~~~ 249 (296)
+|..++|.+++++.+..|||+.|++......++.++..
T Consensus 145 ~g~~~g~~~~g~l~~~~gw~~~f~~~~~~~~l~~~~~~ 182 (471)
T PRK10504 145 VGPLLGPALGGLLVEYASWHWIFLINIPVGIIGAIATL 182 (471)
T ss_pred HHHHhhhHHHHHHHhhccHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999989999999998776555554443
No 17
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=99.69 E-value=2.3e-17 Score=156.48 Aligned_cols=173 Identities=12% Similarity=0.096 Sum_probs=143.4
Q ss_pred cCCchhHHHHHHHHH-H-hHHHhHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhcchHHHHHHHHHH
Q 045564 50 RGGRTALLSRTVTCL-T-LGEGWVANLMVYMIQEFHITSINSALISNIVNGFVNLFPVLGAIIADSFLGSFQVIWISSFI 127 (296)
Q Consensus 50 ~~~~~~~~~l~~~~~-~-~~y~~~~~l~~yl~~~lg~s~~~a~~i~~~~~~~~~~~~l~~G~laDr~iGR~~~i~i~~~l 127 (296)
+..++.+..+++..+ + +--........-..+.+|++....+.+.+.+.+...+..|+.|+++|| +.||+++.+|..+
T Consensus 29 ~~~~~~l~il~~vnlmny~Dr~~iagv~~~v~~~fni~~s~~Gll~~vf~v~~~i~sPl~gyLadr-yNR~~v~~vG~~i 107 (493)
T KOG1330|consen 29 KSPTLTLVILCLVNLMNYADRYTIAGVLKEVQTYFNISDSELGLLQTVFIVVFMIASPLFGYLADR-YNRKRVIAVGIFI 107 (493)
T ss_pred ccchHHHHHHHHHHHHHHhhhhhhhhhhHHHHHhcCCCchhccchhHHHHHHHHHHHHHHHHHHhh-cCcceEEeeHHHH
Confidence 444555555555555 3 322233445556677899999999999999999999999999999999 6999999999999
Q ss_pred HHHHHHHHHhhccccCCCCCccCCCCcCcCCCCchhhHHHHHHHHHHHHhhchhhhhhhhhhhccCCCccchhhHHHHHH
Q 045564 128 SLLGTILLDSTATFDSLRPQRCDIGLSLCKAPSKVQFAVLYSGIALACLGLGGLRFTLATMGANQFEIPQHQGIFFNWFF 207 (296)
Q Consensus 128 ~~ig~~~la~~~~~p~~~~~~c~~~~~~~~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~~~ad~f~~~~~r~~~f~~~y 207 (296)
+.++.+...+.. .++.+.+.|.+.|+|.+.+.+..+++++|.||++ .|++.++++|
T Consensus 108 W~~Av~~~~fs~-----------------------~Fwq~~l~R~~vGiGeAs~~~ia~s~IaD~f~~~-~Rs~~~~ify 163 (493)
T KOG1330|consen 108 WTLAVFASGFSN-----------------------HFWQVLLCRGFVGIGEASYSPIAPSLIADSFPDD-KRSRVLGIFY 163 (493)
T ss_pred HHHHHHHHHHHH-----------------------HHHHHHHHHHHhccchhhhcccchhHhhhcCcch-hhhHHHHHhh
Confidence 999887776553 4678899999999999999999999999999955 7999999999
Q ss_pred HHHHHHHHHHHHHHHhhhcccc-chhhHHHHHHHHHHHHHH
Q 045564 208 ILTYASTVISSAAFVYIEDNLS-WRLGSGLNIAANLAGVVI 247 (296)
Q Consensus 208 ~~~~iG~~i~p~v~~~l~~~~g-w~~~F~i~~~~~~~~~~~ 247 (296)
+++++|.++|.++++++.+..+ |||+|++.++..++..++
T Consensus 164 ~~ipvGsglG~vvgs~va~~~~~Wr~af~~~avl~vi~~~L 204 (493)
T KOG1330|consen 164 FAIPVGSGLGYVVGSVVASLTFWWRWAFRGSAVLGVIVGLL 204 (493)
T ss_pred hhcccccceeEEeeeeeccCccceEEEEEeehHHHHHHHHH
Confidence 9999999999999999988766 999999988865554433
No 18
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=99.69 E-value=1.8e-15 Score=139.00 Aligned_cols=152 Identities=17% Similarity=0.239 Sum_probs=131.7
Q ss_pred HHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhcchHHHHHHHHHHHHHHHHHHHhhccccCCCCCccC
Q 045564 71 VANLMVYMIQEFHITSINSALISNIVNGFVNLFPVLGAIIADSFLGSFQVIWISSFISLLGTILLDSTATFDSLRPQRCD 150 (296)
Q Consensus 71 ~~~l~~yl~~~lg~s~~~a~~i~~~~~~~~~~~~l~~G~laDr~iGR~~~i~i~~~l~~ig~~~la~~~~~p~~~~~~c~ 150 (296)
...++.++.+++|.+..+.+++.+++.++..++.++.|+++|| +||||++.++.++..++.++..++.
T Consensus 16 ~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr-~g~r~~l~~~~~~~~~~~~~~~~~~----------- 83 (352)
T PF07690_consen 16 SPALPLYLAEELGLSPSQIGLLFSAFFLGSALFSPFAGYLSDR-FGRRRVLIIGLLLFALGSLLLAFAS----------- 83 (352)
T ss_dssp HHHHH-HHHCCSTTTSHCHHHHHHHHHHHHHHHHHHHHHHHHH-S-HHHHHHHHHHHHHHHHHHHHHHC-----------
T ss_pred HHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCeeeEeehhhhhhhHHHHhhhhh-----------
Confidence 3444448889999999999999999999999999999999999 7999999999999998855544321
Q ss_pred CCCcCcCCCCchhhHHHHHHHHHHHHhhchhhhhhhhhhhccCCCccchhhHHHHHHHHHHHHHHHHHHHHHhhhccccc
Q 045564 151 IGLSLCKAPSKVQFAVLYSGIALACLGLGGLRFTLATMGANQFEIPQHQGIFFNWFFILTYASTVISSAAFVYIEDNLSW 230 (296)
Q Consensus 151 ~~~~~~~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~~~ad~f~~~~~r~~~f~~~y~~~~iG~~i~p~v~~~l~~~~gw 230 (296)
+.+.++++|++.|++.+...+...+++.|.+|+ ++|+..+++.+.+.++|..++|.+++++.+..||
T Consensus 84 ------------~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~~~ 150 (352)
T PF07690_consen 84 ------------NFWLLLIARFLLGIGSGFFSPASNALIADWFPP-EERGRAFGILSAGFSLGSILGPLLGGFLISYFGW 150 (352)
T ss_dssp ------------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCT-CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHCHH
T ss_pred ------------hHHHHhhhccccccccccccccccccccccchh-hhhhhccccccchhhhhhhcccchhhhhhhcccc
Confidence 234788999999999999999999999999995 4789999999999999999999999999988999
Q ss_pred hhhHHHHHHHHHHHHHH
Q 045564 231 RLGSGLNIAANLAGVVI 247 (296)
Q Consensus 231 ~~~F~i~~~~~~~~~~~ 247 (296)
++.|++.++..++..++
T Consensus 151 ~~~~~~~~~~~~~~~il 167 (352)
T PF07690_consen 151 RWAFLISAILSLIAAIL 167 (352)
T ss_dssp CCHHHHHHHHHHHHHHH
T ss_pred ccccccccchhhhhhhh
Confidence 99999999987776653
No 19
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.69 E-value=1.4e-15 Score=143.91 Aligned_cols=176 Identities=16% Similarity=0.075 Sum_probs=138.4
Q ss_pred chhHHHHHHHHH--H-hHHHhHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhcchHHHHHHHHHHHH
Q 045564 53 RTALLSRTVTCL--T-LGEGWVANLMVYMIQEFHITSINSALISNIVNGFVNLFPVLGAIIADSFLGSFQVIWISSFISL 129 (296)
Q Consensus 53 ~~~~~~l~~~~~--~-~~y~~~~~l~~yl~~~lg~s~~~a~~i~~~~~~~~~~~~l~~G~laDr~iGR~~~i~i~~~l~~ 129 (296)
+|.+..+....+ . ........++.|+.+++|.|..+.+++.+++.++..++.++.|+++|| +||||++.++.++..
T Consensus 14 ~~~~~~l~~~~~~~~~~~~~~~~~l~~~i~~~~g~s~~~~g~~~~~~~~~~~i~~~~~G~l~Dr-~g~r~~l~~~~~~~~ 92 (399)
T PRK05122 14 TLRIVSIVMFTFISYLTIGLPLAVLPGYVHDQLGFSAFLAGLVISLQYLATLLSRPHAGRYADT-LGPKKAVVFGLCGCA 92 (399)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHhchhhHhHHhc-cCCcchHHHHHHHHH
Confidence 334444444444 3 444456678888999999999999999999999999999999999999 799999999998888
Q ss_pred HHHHHHHhhccccCCCCCccCCCCcCcCCCCchhhHHHHHHHHHHHHhhchhhhhhhhhhhccCCCccchhhHHHHHHHH
Q 045564 130 LGTILLDSTATFDSLRPQRCDIGLSLCKAPSKVQFAVLYSGIALACLGLGGLRFTLATMGANQFEIPQHQGIFFNWFFIL 209 (296)
Q Consensus 130 ig~~~la~~~~~p~~~~~~c~~~~~~~~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~~~ad~f~~~~~r~~~f~~~y~~ 209 (296)
++.+.+.++.+.... ...+...+++.|++.|++.+...+...+++.|.+|+ ++|++..+++..+
T Consensus 93 ~~~~~~~~~~~~~~~---------------~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~-~~r~~~~~~~~~~ 156 (399)
T PRK05122 93 LSGLLYLLAGLLAAW---------------PVLSLLLLLLGRLLLGIGESLAGTGSILWGIGRVGA-LHTGRVISWNGIA 156 (399)
T ss_pred HHHHHHHHhhhhhcc---------------chhHHHHHHHHHHHHHhhHHhhcchHHHHHHhhcCh-hhhccchhhhhhh
Confidence 776665544311100 001345688899999999999999999999999984 4688899988888
Q ss_pred HHHHHHHHHHHHHhhhccccchhhHHHHHHHHHHHH
Q 045564 210 TYASTVISSAAFVYIEDNLSWRLGSGLNIAANLAGV 245 (296)
Q Consensus 210 ~~iG~~i~p~v~~~l~~~~gw~~~F~i~~~~~~~~~ 245 (296)
.++|..++|.+++++.+..||++.|++..+..++..
T Consensus 157 ~~~g~~~g~~l~~~l~~~~g~~~~~~~~~~~~~~~~ 192 (399)
T PRK05122 157 TYGALAIGAPLGVLLYHWGGLAGLGLLIMLLALLGL 192 (399)
T ss_pred hhHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHH
Confidence 899999999999999988999998887666544433
No 20
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.69 E-value=2.4e-15 Score=143.30 Aligned_cols=167 Identities=13% Similarity=0.106 Sum_probs=137.0
Q ss_pred CCchhHHHHHHHHH-H-hHHHhHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhcchHHHHHHHHHHH
Q 045564 51 GGRTALLSRTVTCL-T-LGEGWVANLMVYMIQEFHITSINSALISNIVNGFVNLFPVLGAIIADSFLGSFQVIWISSFIS 128 (296)
Q Consensus 51 ~~~~~~~~l~~~~~-~-~~y~~~~~l~~yl~~~lg~s~~~a~~i~~~~~~~~~~~~l~~G~laDr~iGR~~~i~i~~~l~ 128 (296)
.+++.+....+..+ . ..+....++..++.+++|.+..+.+.+.+++.++..++.++.|+++|| +|||+++.++.++.
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~~~~~~~~~~~l~~~~~g~l~dr-~g~r~~l~~~~~~~ 93 (426)
T PRK12307 15 PQKNALFSAWLGYVFDGFDFMLIFYIMYLIKADLGLTDMEGAFLATAAFIGRPFGGALFGLLADK-FGRKPLMMWSIVAY 93 (426)
T ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCChHHHHHHHHHH
Confidence 34454444444333 2 333344556667788999999999999999999999999999999999 79999999999999
Q ss_pred HHHHHHHHhhccccCCCCCccCCCCcCcCCCCchhhHHHHHHHHHHHHhhchhhhhhhhhhhccCCCccchhhHHHHHHH
Q 045564 129 LLGTILLDSTATFDSLRPQRCDIGLSLCKAPSKVQFAVLYSGIALACLGLGGLRFTLATMGANQFEIPQHQGIFFNWFFI 208 (296)
Q Consensus 129 ~ig~~~la~~~~~p~~~~~~c~~~~~~~~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~~~ad~f~~~~~r~~~f~~~y~ 208 (296)
.++.++.+++. +...++++|++.|++.|...+....++.|.+|++ +|++..+++..
T Consensus 94 ~~~~~~~~~~~-----------------------~~~~l~~~r~l~G~g~g~~~~~~~~~~~~~~~~~-~r~~~~~~~~~ 149 (426)
T PRK12307 94 SVGTGLSGLAS-----------------------GVIMLTLSRFIVGMGMAGEYACASTYAVESWPKH-LKSKASAFLVS 149 (426)
T ss_pred HHHHHHHHHHh-----------------------HHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCHh-HhhHhhhHHHH
Confidence 98887766542 3567889999999999999999999999999944 68899999999
Q ss_pred HHHHHHHHHHHHHHhhhccccchhhHHHHHHHHH
Q 045564 209 LTYASTVISSAAFVYIEDNLSWRLGSGLNIAANL 242 (296)
Q Consensus 209 ~~~iG~~i~p~v~~~l~~~~gw~~~F~i~~~~~~ 242 (296)
+..+|..+++.+.+++.+..|||+.|++..+..+
T Consensus 150 ~~~lg~~~~~~l~~~l~~~~~w~~~f~i~~~~~~ 183 (426)
T PRK12307 150 GFGIGNIIAAYFMPSFAEAYGWRAAFFVGLLPVL 183 (426)
T ss_pred HHhHHHHHHHHHHHHHcccCCHHHHHHHHHHHHH
Confidence 9999999999999999888999999998665443
No 21
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.68 E-value=3.2e-15 Score=141.51 Aligned_cols=171 Identities=16% Similarity=0.066 Sum_probs=135.9
Q ss_pred cCCchhHHHHHHHHH--H-hHHHhHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhcchHHHHHHHHH
Q 045564 50 RGGRTALLSRTVTCL--T-LGEGWVANLMVYMIQEFHITSINSALISNIVNGFVNLFPVLGAIIADSFLGSFQVIWISSF 126 (296)
Q Consensus 50 ~~~~~~~~~l~~~~~--~-~~y~~~~~l~~yl~~~lg~s~~~a~~i~~~~~~~~~~~~l~~G~laDr~iGR~~~i~i~~~ 126 (296)
+.+|..+...+...+ . ..+. .....+.+.+++|.+..+.+++.+.+.++..++.++.|+++|| +||||++.++.+
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr-~g~r~~~~~~~~ 88 (406)
T PRK11551 11 SRLALTIGLCFLVALLEGLDLQS-AGVAAPRMAQEFGLDVAQMGWAFSAGILGLLPGALLGGRLADR-IGRKRILIVSVA 88 (406)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCCchhHHHHHH
Confidence 345555554444444 2 2222 2333346668899999999999999999999999999999999 799999999998
Q ss_pred HHHHHHHHHHhhccccCCCCCccCCCCcCcCCCCchhhHHHHHHHHHHHHhhchhhhhhhhhhhccCCCccchhhHHHHH
Q 045564 127 ISLLGTILLDSTATFDSLRPQRCDIGLSLCKAPSKVQFAVLYSGIALACLGLGGLRFTLATMGANQFEIPQHQGIFFNWF 206 (296)
Q Consensus 127 l~~ig~~~la~~~~~p~~~~~~c~~~~~~~~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~~~ad~f~~~~~r~~~f~~~ 206 (296)
+..++.+++.+.. +...+++.|++.|++.+...+...+++.|.+|+ ++|++..+++
T Consensus 89 ~~~~~~~~~~~~~-----------------------~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~-~~r~~~~~~~ 144 (406)
T PRK11551 89 LFGLFSLATAQAW-----------------------DFPSLLVARLLTGVGLGGALPNLIALTSEAVGP-RLRGTAVSLM 144 (406)
T ss_pred HHHHHHHHHHHhc-----------------------cHHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCH-HHHHHHHHHH
Confidence 8887766554432 346778889999999999999999999999984 4789999999
Q ss_pred HHHHHHHHHHHHHHHHhhhccccchhhHHHHHHHHHHHHH
Q 045564 207 FILTYASTVISSAAFVYIEDNLSWRLGSGLNIAANLAGVV 246 (296)
Q Consensus 207 y~~~~iG~~i~p~v~~~l~~~~gw~~~F~i~~~~~~~~~~ 246 (296)
+...++|+.+++.+++.+.+..+|++.|++.+++.++..+
T Consensus 145 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (406)
T PRK11551 145 YCGVPFGGALASVIGVLAAGDAAWRHIFYVGGVGPLLLVP 184 (406)
T ss_pred HHHHHHHHHHHHHHHHHHccccCHHHHHHHHHHHHHHHHH
Confidence 9999999999999998888888999999987765544443
No 22
>PRK12382 putative transporter; Provisional
Probab=99.68 E-value=3.3e-15 Score=141.12 Aligned_cols=172 Identities=12% Similarity=0.079 Sum_probs=133.8
Q ss_pred chhHHHHHHHHH--H-hHHHhHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhcchHHHHHHHHHHHH
Q 045564 53 RTALLSRTVTCL--T-LGEGWVANLMVYMIQEFHITSINSALISNIVNGFVNLFPVLGAIIADSFLGSFQVIWISSFISL 129 (296)
Q Consensus 53 ~~~~~~l~~~~~--~-~~y~~~~~l~~yl~~~lg~s~~~a~~i~~~~~~~~~~~~l~~G~laDr~iGR~~~i~i~~~l~~ 129 (296)
.+.++.+++..+ . ........++.|+.+++|.|..+.+.+.+.+.+...++.++.|+++|| +||||++.++.+...
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~p~l~~~l~~~lg~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr-~g~r~~l~~~~~~~~ 92 (392)
T PRK12382 14 NFSLFRIAFAVFLTYMTVGLPLPVIPLFVHHDLGFGNTMVGIAVGIQFLATVLTRGYAGRLADQ-YGAKRSALQGMLACG 92 (392)
T ss_pred cccHHHHHHHHHHHHHHHHHHhhhhhHHHHHhcCCcHHHHHHHHHHHHHHHHHHhhhhhHHHHh-hcchHHHHHHHHHHH
Confidence 334444444444 3 444455667778999999999999999999999999999999999999 799999999888777
Q ss_pred HHHHHHHhhccccCCCCCccCCCCcCcCCCCchhhHHHHHHHHHHHHhhchhhhhhhhhhhccCCCccchhhHHHHHHHH
Q 045564 130 LGTILLDSTATFDSLRPQRCDIGLSLCKAPSKVQFAVLYSGIALACLGLGGLRFTLATMGANQFEIPQHQGIFFNWFFIL 209 (296)
Q Consensus 130 ig~~~la~~~~~p~~~~~~c~~~~~~~~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~~~ad~f~~~~~r~~~f~~~y~~ 209 (296)
++.+...+....+... ..+...++++|++.|++.+...+...+.+.|.+|+ ++|+++++++..+
T Consensus 93 ~~~~~~~~~~~~~~~~---------------~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~-~~r~~a~~~~~~~ 156 (392)
T PRK12382 93 LAGLAYLLAAILPVSA---------------PFKFALLVVGRLILGFGESQLLTGALTWGLGLVGP-KHSGKVMSWNGMA 156 (392)
T ss_pred HHHHHHHhhhccccch---------------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCc-cccchhhhHHHHH
Confidence 6554333222111100 12456788999999999998888888899999984 4789999999999
Q ss_pred HHHHHHHHHHHHHhhhccccchhhHHHHHHHH
Q 045564 210 TYASTVISSAAFVYIEDNLSWRLGSGLNIAAN 241 (296)
Q Consensus 210 ~~iG~~i~p~v~~~l~~~~gw~~~F~i~~~~~ 241 (296)
.++|..++|.+++++.+.+||++.+.+..+..
T Consensus 157 ~~~g~~~g~~~~~~l~~~~g~~~~~~~~~~~~ 188 (392)
T PRK12382 157 MYGALAAGAPLGLLLHSHFGFAALALTTMVLP 188 (392)
T ss_pred HHHHHHHHHHHHHHHHhccChHHHHHHHHHHH
Confidence 99999999999999988889998777665543
No 23
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.68 E-value=3.7e-15 Score=144.89 Aligned_cols=168 Identities=13% Similarity=0.095 Sum_probs=138.5
Q ss_pred CCchhHHHHHHHHH-H-hHHHhHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhcchHHHHHHHHHHH
Q 045564 51 GGRTALLSRTVTCL-T-LGEGWVANLMVYMIQEFHITSINSALISNIVNGFVNLFPVLGAIIADSFLGSFQVIWISSFIS 128 (296)
Q Consensus 51 ~~~~~~~~l~~~~~-~-~~y~~~~~l~~yl~~~lg~s~~~a~~i~~~~~~~~~~~~l~~G~laDr~iGR~~~i~i~~~l~ 128 (296)
.+|+.+..++...+ . ..+.....+..++.+++|++..+.+++.+.+.++..++.+++|+++|| +|||+++.++.++.
T Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr-~g~r~~~~~~~~~~ 95 (496)
T PRK03893 17 AQWKAFSAAWLGYLLDGFDFVLITLVLTEVQGEFGLTTVQAASLISAAFISRWFGGLLLGAMGDR-YGRRLAMVISIVLF 95 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCcHHHHHHHHHHH
Confidence 45555544444444 4 444455566667888999999999999999999999999999999999 79999999999988
Q ss_pred HHHHHHHHhhccccCCCCCccCCCCcCcCCCCchhhHHHHHHHHHHHHhhchhhhhhhhhhhccCCCccchhhHHHHHHH
Q 045564 129 LLGTILLDSTATFDSLRPQRCDIGLSLCKAPSKVQFAVLYSGIALACLGLGGLRFTLATMGANQFEIPQHQGIFFNWFFI 208 (296)
Q Consensus 129 ~ig~~~la~~~~~p~~~~~~c~~~~~~~~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~~~ad~f~~~~~r~~~f~~~y~ 208 (296)
.++.+++.+.. +...+++.|++.|++.++..+...+++.|.+|+ ++|+..+++++.
T Consensus 96 ~~~~~~~~~~~-----------------------~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~-~~r~~~~~~~~~ 151 (496)
T PRK03893 96 SVGTLACGFAP-----------------------GYWTLFIARLVIGMGMAGEYGSSATYVIESWPK-HLRNKASGFLIS 151 (496)
T ss_pred HHHHHHHHHHh-----------------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCH-HHHHHHHHHHHH
Confidence 88877766542 356788899999999999999999999999984 478899999999
Q ss_pred HHHHHHHHHHHHHHhhhccccchhhHHHHHHHHHH
Q 045564 209 LTYASTVISSAAFVYIEDNLSWRLGSGLNIAANLA 243 (296)
Q Consensus 209 ~~~iG~~i~p~v~~~l~~~~gw~~~F~i~~~~~~~ 243 (296)
+.++|..++|.+.+++.+.+|||+.|++.++..++
T Consensus 152 ~~~~g~~~~~~~~~~l~~~~~w~~~f~~~~~~~~~ 186 (496)
T PRK03893 152 GFSIGAVVAAQVYSLVVPVWGWRALFFIGILPIIF 186 (496)
T ss_pred HHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHH
Confidence 99999999999999999999999999886554433
No 24
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=99.68 E-value=2.9e-15 Score=139.88 Aligned_cols=150 Identities=11% Similarity=0.049 Sum_probs=129.5
Q ss_pred HHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhcchHHHHHHHHHHHHHHHHHHHhhccccCCCCCccCCCC
Q 045564 74 LMVYMIQEFHITSINSALISNIVNGFVNLFPVLGAIIADSFLGSFQVIWISSFISLLGTILLDSTATFDSLRPQRCDIGL 153 (296)
Q Consensus 74 l~~yl~~~lg~s~~~a~~i~~~~~~~~~~~~l~~G~laDr~iGR~~~i~i~~~l~~ig~~~la~~~~~p~~~~~~c~~~~ 153 (296)
..+.+.+++|.+..+.+++.+++..+..++.++.|+++|| +||||++.++.++..++.+++....
T Consensus 27 ~~p~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~-~g~r~~~~~~~~~~~~~~~~~~~~~-------------- 91 (385)
T TIGR00710 27 AFPEIAADLSTPASIVQMTLTLYLLGFAAGQLLWGPLSDR-YGRRPVLLLGLFIFALSSLGLALSN-------------- 91 (385)
T ss_pred cHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHh-cCChHHHHHHHHHHHHHHHHHHHHc--------------
Confidence 3446678899999999999999999999999999999999 7999999999998888777665432
Q ss_pred cCcCCCCchhhHHHHHHHHHHHHhhchhhhhhhhhhhccCCCccchhhHHHHHHHHHHHHHHHHHHHHHhhhccccchhh
Q 045564 154 SLCKAPSKVQFAVLYSGIALACLGLGGLRFTLATMGANQFEIPQHQGIFFNWFFILTYASTVISSAAFVYIEDNLSWRLG 233 (296)
Q Consensus 154 ~~~~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~~~ad~f~~~~~r~~~f~~~y~~~~iG~~i~p~v~~~l~~~~gw~~~ 233 (296)
+...+++.|++.|++.+...+...+++.|.+|+ ++|+..+++.+...++|..++|.+++++.+..+|++.
T Consensus 92 ---------~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~ 161 (385)
T TIGR00710 92 ---------NIETLLVLRFVQAFGASAGSVISQALVRDIYPG-EELSRIYSILMPVLALAPAVAPLLGGYILVWLSWHAI 161 (385)
T ss_pred ---------cHHHHHHHHHHHHcchhHHHHHHHHHHHHhcCc-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHH
Confidence 345788889999999999999999999999984 4789999999999999999999999999988899999
Q ss_pred HHHHHHHHHHHHHHH
Q 045564 234 SGLNIAANLAGVVIF 248 (296)
Q Consensus 234 F~i~~~~~~~~~~~~ 248 (296)
|++.++..++..+..
T Consensus 162 ~~~~~~~~~~~~~~~ 176 (385)
T TIGR00710 162 FAFLSLAGILLSALI 176 (385)
T ss_pred HHHHHHHHHHHHHHH
Confidence 998877665554443
No 25
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=99.68 E-value=4.5e-15 Score=140.31 Aligned_cols=178 Identities=16% Similarity=0.097 Sum_probs=153.8
Q ss_pred cCCchhHHHHHHHHH--H-hHHHhHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhcchHHHHHHHHH
Q 045564 50 RGGRTALLSRTVTCL--T-LGEGWVANLMVYMIQEFHITSINSALISNIVNGFVNLFPVLGAIIADSFLGSFQVIWISSF 126 (296)
Q Consensus 50 ~~~~~~~~~l~~~~~--~-~~y~~~~~l~~yl~~~lg~s~~~a~~i~~~~~~~~~~~~l~~G~laDr~iGR~~~i~i~~~ 126 (296)
+..|..++.+.+..| . +-| +...+.+-+.+++|+|..++++.+++|..+..++.++...+.|| +.||++++....
T Consensus 9 ~~~~~~l~aLa~~~F~igttEf-v~~gLLp~iA~dl~vs~~~aG~lis~yAl~~ai~ap~l~~lt~r-~~Rr~lLl~~l~ 86 (394)
T COG2814 9 KPMWLALLALALAAFAIGTTEF-VPVGLLPPIAADLGVSEGAAGQLITAYALGVALGAPLLALLTGR-LERRRLLLGLLA 86 (394)
T ss_pred ccchHHHHHHHHHHHHHHhHHH-HHHhchHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcc-cchHHHHHHHHH
Confidence 345556666666666 3 444 44555566778999999999999999999999999999999999 799999999999
Q ss_pred HHHHHHHHHHhhccccCCCCCccCCCCcCcCCCCchhhHHHHHHHHHHHHhhchhhhhhhhhhhccCCCccchhhHHHHH
Q 045564 127 ISLLGTILLDSTATFDSLRPQRCDIGLSLCKAPSKVQFAVLYSGIALACLGLGGLRFTLATMGANQFEIPQHQGIFFNWF 206 (296)
Q Consensus 127 l~~ig~~~la~~~~~p~~~~~~c~~~~~~~~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~~~ad~f~~~~~r~~~f~~~ 206 (296)
++++|.++.+++. ++..++++|++.++..|..++...+..+++.|++ +|+++.++.
T Consensus 87 lFi~~n~l~alAp-----------------------~f~~Ll~aR~~~g~a~G~f~~i~~~~a~~lvpp~-~~~~Aiaiv 142 (394)
T COG2814 87 LFIVSNLLSALAP-----------------------SFAVLLLARALAGLAHGVFWSIAAALAARLVPPG-KRGRALALV 142 (394)
T ss_pred HHHHHHHHHHHhc-----------------------cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcc-chhhHHHHH
Confidence 9999999988874 4678999999999999999999999999999954 799999999
Q ss_pred HHHHHHHHHHHHHHHHhhhccccchhhHHHHHHHHHHHHHHHHhCCC
Q 045564 207 FILTYASTVISSAAFVYIEDNLSWRLGSGLNIAANLAGVVIFLSGKH 253 (296)
Q Consensus 207 y~~~~iG~~i~p~v~~~l~~~~gw~~~F~i~~~~~~~~~~~~~~~~~ 253 (296)
+.+..++..+|..++.++.|.+|||+.|++-+++.++.++..+...|
T Consensus 143 ~~G~tlA~v~GvPLGt~ig~~~GWR~~F~~ia~l~ll~~~~~~~~lP 189 (394)
T COG2814 143 FTGLTLATVLGVPLGTFLGQLFGWRATFLAIAVLALLALLLLWKLLP 189 (394)
T ss_pred HHHHHHHHHHhccHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 99999999999999999999999999999988877777766655555
No 26
>TIGR00895 2A0115 benzoate transport.
Probab=99.68 E-value=2.3e-15 Score=140.43 Aligned_cols=169 Identities=15% Similarity=0.082 Sum_probs=135.9
Q ss_pred CchhHHHHHHHHH-H-hHHHhHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhcchHHHHHHHHHHHH
Q 045564 52 GRTALLSRTVTCL-T-LGEGWVANLMVYMIQEFHITSINSALISNIVNGFVNLFPVLGAIIADSFLGSFQVIWISSFISL 129 (296)
Q Consensus 52 ~~~~~~~l~~~~~-~-~~y~~~~~l~~yl~~~lg~s~~~a~~i~~~~~~~~~~~~l~~G~laDr~iGR~~~i~i~~~l~~ 129 (296)
+|+.+...+...+ . ..+.......+++.+++|.+..+.+++.++..++..++.++.|+++|| +|||+.+.++.++..
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~-~g~~~~~~~~~~~~~ 93 (398)
T TIGR00895 15 QWRAIILSFLIMLMDGYDLAAMGFAAPAISAEWGLDPVQLGFLFSAGLIGMAFGALFFGPLADR-IGRKRVLLWSILLFS 93 (398)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHHhHHHHHH-hhhHHHHHHHHHHHH
Confidence 4444444444444 3 333344555667778899999999999999999999999999999999 799999999998888
Q ss_pred HHHHHHHhhccccCCCCCccCCCCcCcCCCCchhhHHHHHHHHHHHHhhchhhhhhhhhhhccCCCccchhhHHHHHHHH
Q 045564 130 LGTILLDSTATFDSLRPQRCDIGLSLCKAPSKVQFAVLYSGIALACLGLGGLRFTLATMGANQFEIPQHQGIFFNWFFIL 209 (296)
Q Consensus 130 ig~~~la~~~~~p~~~~~~c~~~~~~~~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~~~ad~f~~~~~r~~~f~~~y~~ 209 (296)
++.+++.+.. +...+++.+++.|++.+...+...++++|.+|+ ++|+..++++..+
T Consensus 94 ~~~~~~~~~~-----------------------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-~~r~~~~~~~~~~ 149 (398)
T TIGR00895 94 VFTLLCALAT-----------------------NVTQLLILRFLAGLGLGGLMPNLNALVSEYAPK-RFRGTAVGLMFCG 149 (398)
T ss_pred HHHHHHHHcc-----------------------chHHHHHHHHHHhcccccchhhHHHHHHHHcCH-HhhchhHhhHhhH
Confidence 8776655432 345678889999999999999999999999984 4789999999999
Q ss_pred HHHHHHHHHHHHHhhhccccchhhHHHHHHHHHHHH
Q 045564 210 TYASTVISSAAFVYIEDNLSWRLGSGLNIAANLAGV 245 (296)
Q Consensus 210 ~~iG~~i~p~v~~~l~~~~gw~~~F~i~~~~~~~~~ 245 (296)
.++|..++|.+.+++.+..||++.|++.++...+..
T Consensus 150 ~~~g~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~ 185 (398)
T TIGR00895 150 YPIGAAVGGFLAGWLIPVFGWRSLFYVGGIAPLLLL 185 (398)
T ss_pred HHHHHHHHHHHHHHHhhcccceeehhhhhhHHHHHH
Confidence 999999999999999998999999998865443333
No 27
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=99.67 E-value=5.1e-15 Score=141.11 Aligned_cols=156 Identities=12% Similarity=0.116 Sum_probs=136.0
Q ss_pred H-hHHHhHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhcchHHHHHHHHHHHHHHHHHHHhhccccC
Q 045564 65 T-LGEGWVANLMVYMIQEFHITSINSALISNIVNGFVNLFPVLGAIIADSFLGSFQVIWISSFISLLGTILLDSTATFDS 143 (296)
Q Consensus 65 ~-~~y~~~~~l~~yl~~~lg~s~~~a~~i~~~~~~~~~~~~l~~G~laDr~iGR~~~i~i~~~l~~ig~~~la~~~~~p~ 143 (296)
. +.+.+...++.|+.+++|.|..+.+.+.+.+.+...+..+++|+++|| +|||+++.++.++..++.+.+....
T Consensus 23 ~~~~~~~~~~~~~~~~~~~g~s~~~~gl~~~~~~l~~~~~~~~~G~l~dr-~g~k~~l~~~~~~~~~~~~~~~~~~---- 97 (400)
T PRK11646 23 VLGFFVVFPLISIRFVDQLGWAAVMVGIALGLRQFIQQGLGIFGGAIADR-FGAKPMIVTGMLMRAAGFATMAIAH---- 97 (400)
T ss_pred HHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHhhhhHHHHH-hCchHHHHHHHHHHHHHHHHHHHhc----
Confidence 6 777788889999999999999999999999999999999999999999 7999999999999988877665432
Q ss_pred CCCCccCCCCcCcCCCCchhhHHHHHHHHHHHHhhchhhhhhhhhhhccCCCccchhhHHHHHHHHHHHHHHHHHHHHHh
Q 045564 144 LRPQRCDIGLSLCKAPSKVQFAVLYSGIALACLGLGGLRFTLATMGANQFEIPQHQGIFFNWFFILTYASTVISSAAFVY 223 (296)
Q Consensus 144 ~~~~~c~~~~~~~~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~~~ad~f~~~~~r~~~f~~~y~~~~iG~~i~p~v~~~ 223 (296)
+.+.+++.+++.+++.+...+...+.+.|.+|+ ++|++++++.+...++|..+||.++++
T Consensus 98 -------------------~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~-~~~~~a~~~~~~~~~~g~~ig~~l~g~ 157 (400)
T PRK11646 98 -------------------EPWLLWLSCILSGLGGTLFDPPRTALVIKLIRP-HQRGRFFSLLMMQDSAGAVIGALLGSW 157 (400)
T ss_pred -------------------cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCH-HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 245677889999999988889999999999984 478999999999999999999999999
Q ss_pred hhccccchhhHHHHHHHHHHHHH
Q 045564 224 IEDNLSWRLGSGLNIAANLAGVV 246 (296)
Q Consensus 224 l~~~~gw~~~F~i~~~~~~~~~~ 246 (296)
+. .+||++.|++.++..++..+
T Consensus 158 l~-~~g~~~~f~~~~~~~~~~~i 179 (400)
T PRK11646 158 LL-QYDFRLVCATGAVLFVLAAA 179 (400)
T ss_pred HH-HhhHHHHHHHHHHHHHHHHH
Confidence 98 67999999998776555443
No 28
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.67 E-value=3.2e-15 Score=152.56 Aligned_cols=162 Identities=15% Similarity=0.153 Sum_probs=133.2
Q ss_pred hHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhcchHHHHHHHHHHHHHHHHHHHhhccccCCCCCcc
Q 045564 70 WVANLMVYMIQEFHITSINSALISNIVNGFVNLFPVLGAIIADSFLGSFQVIWISSFISLLGTILLDSTATFDSLRPQRC 149 (296)
Q Consensus 70 ~~~~l~~yl~~~lg~s~~~a~~i~~~~~~~~~~~~l~~G~laDr~iGR~~~i~i~~~l~~ig~~~la~~~~~p~~~~~~c 149 (296)
+...+.+++.+++|++..+.+++.+++.++..++.+++|+++|| +|||++++++.++..++.++++++.
T Consensus 185 ~is~ilp~i~~~~gls~~~~g~l~s~~~lG~iiG~li~G~LsDR-~GRR~~lii~lil~~i~~ll~afa~---------- 253 (742)
T TIGR01299 185 VVGFVLPSAEKDLCIPDSGKGMLGLIVYLGMMVGAFFWGGLADK-LGRKQCLLICLSVNGFFAFFSSFVQ---------- 253 (742)
T ss_pred HHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCcHHHHHHHHHHHHHHHHHHHHHh----------
Confidence 45556677888999999999999999999999999999999999 7999999999998888877766542
Q ss_pred CCCCcCcCCCCchhhHHHHHHHHHHHHhhchhhhhhhhhhhccCCCccchhhHHHHHHHHHHHHHHHHHHHHHhhhcc--
Q 045564 150 DIGLSLCKAPSKVQFAVLYSGIALACLGLGGLRFTLATMGANQFEIPQHQGIFFNWFFILTYASTVISSAAFVYIEDN-- 227 (296)
Q Consensus 150 ~~~~~~~~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~~~ad~f~~~~~r~~~f~~~y~~~~iG~~i~p~v~~~l~~~-- 227 (296)
+...++++|++.|+|.|+..+..+++++|.+|. +.|+..++++.+...+|.++++.++.++...
T Consensus 254 -------------s~~~llv~R~l~G~g~g~~~p~~~~~isE~~p~-~~Rg~~~g~~~~~~~iG~ila~~la~~il~~~G 319 (742)
T TIGR01299 254 -------------GYGFFLFCRLLSGFGIGGAIPIVFSYFAEFLAQ-EKRGEHLSWLCMFWMIGGIYAAAMAWAIIPHYG 319 (742)
T ss_pred -------------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 356788899999999999999999999999994 4789999998888899999988877665432
Q ss_pred -----------ccchhhHHHHHHHHHHHHHH--HHhCCCchh
Q 045564 228 -----------LSWRLGSGLNIAANLAGVVI--FLSGKHFYF 256 (296)
Q Consensus 228 -----------~gw~~~F~i~~~~~~~~~~~--~~~~~~~~~ 256 (296)
.+||+.|++.++..++.+++ +++.+|+|.
T Consensus 320 ~~~~~g~~~~~~gWR~l~~i~~lp~ll~ll~~~~lPESPrwL 361 (742)
T TIGR01299 320 WSFQMGSAYQFHSWRVFVIVCAFPCVFAIGALTFMPESPRFF 361 (742)
T ss_pred chhccccccccccHHHHHHHHHHHHHHHHHHHHHcCCCHHHH
Confidence 36899888877755554443 356777775
No 29
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.67 E-value=4e-15 Score=140.57 Aligned_cols=150 Identities=10% Similarity=0.072 Sum_probs=128.5
Q ss_pred HHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhcchHHHHHHHHHHHHHHHHHHHhhccccCCCCCccCCC
Q 045564 73 NLMVYMIQEFHITSINSALISNIVNGFVNLFPVLGAIIADSFLGSFQVIWISSFISLLGTILLDSTATFDSLRPQRCDIG 152 (296)
Q Consensus 73 ~l~~yl~~~lg~s~~~a~~i~~~~~~~~~~~~l~~G~laDr~iGR~~~i~i~~~l~~ig~~~la~~~~~p~~~~~~c~~~ 152 (296)
...+.+.+++|.+..+.+++.+.+..+..++.++.|+++|| +||||++.++.++..++.++++.+.
T Consensus 24 ~~l~~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr-~g~r~~~~~~~~~~~~~~~l~~~~~------------- 89 (382)
T PRK10091 24 GVLTELAHDVGISIPAAGHMISYYALGVVVGAPIIALFSSR-YSLKHILLFLVALCVIGNAMFTLSS------------- 89 (382)
T ss_pred hChHHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHHcc-CccHHHHHHHHHHHHHHHHHHHHhC-------------
Confidence 34456678999999999999999999999999999999999 7999999999999998887766542
Q ss_pred CcCcCCCCchhhHHHHHHHHHHHHhhchhhhhhhhhhhccCCCccchhhHHHHHHHHHHHHHHHHHHHHHhhhccccchh
Q 045564 153 LSLCKAPSKVQFAVLYSGIALACLGLGGLRFTLATMGANQFEIPQHQGIFFNWFFILTYASTVISSAAFVYIEDNLSWRL 232 (296)
Q Consensus 153 ~~~~~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~~~ad~f~~~~~r~~~f~~~y~~~~iG~~i~p~v~~~l~~~~gw~~ 232 (296)
+.+.+++.|++.|++.+...+...+.+.|.+|+ ++|+..++.+..+..+|..++|.+++++.+..|||+
T Consensus 90 ----------~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gwr~ 158 (382)
T PRK10091 90 ----------SYLMLAIGRLVSGFPHGAFFGVGAIVLSKIIKP-GKVTAAVAGMVSGMTVANLLGIPLGTYLSQEFSWRY 158 (382)
T ss_pred ----------cHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCCh-HHhhHHHHHHHHHHHHHHHHhccHHHHHhhhccHHH
Confidence 356788899999999998888888889999884 467888888888889999999999999998899999
Q ss_pred hHHHHHHHHHHHHHH
Q 045564 233 GSGLNIAANLAGVVI 247 (296)
Q Consensus 233 ~F~i~~~~~~~~~~~ 247 (296)
.|++.++..++.++.
T Consensus 159 ~f~~~~~~~~~~~~~ 173 (382)
T PRK10091 159 TFLLIAVFNIAVLAS 173 (382)
T ss_pred HHHHHHHHHHHHHHH
Confidence 999988765554443
No 30
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=99.67 E-value=4.9e-15 Score=141.92 Aligned_cols=146 Identities=9% Similarity=0.016 Sum_probs=125.7
Q ss_pred HHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhcchHHHHHHHHHHHHHHHHHHHhhccccCCCCCccCCCCcCc
Q 045564 77 YMIQEFHITSINSALISNIVNGFVNLFPVLGAIIADSFLGSFQVIWISSFISLLGTILLDSTATFDSLRPQRCDIGLSLC 156 (296)
Q Consensus 77 yl~~~lg~s~~~a~~i~~~~~~~~~~~~l~~G~laDr~iGR~~~i~i~~~l~~ig~~~la~~~~~p~~~~~~c~~~~~~~ 156 (296)
.+.+++|.+..++++.++++.++..++.+++|+++|| +||||++.++.+++.++.++..++.
T Consensus 41 ~i~~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr-~Grr~~l~~~~~~~~~~~~~~~~a~----------------- 102 (413)
T PRK15403 41 NVVRDFNADVSLAPASVSLYLAGGMALQWLLGPLSDR-IGRRPVLITGALIFTLACAATLFTT----------------- 102 (413)
T ss_pred HHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhHHHHH-cCchHHHHHHHHHHHHHHHHHHHcC-----------------
Confidence 4678899999999999999999999999999999999 7999999999999888877665442
Q ss_pred CCCCchhhHHHHHHHHHHHHhhchhhhhhhhhhhccCCCccchhhHHHHHHHHHHHHHHHHHHHHHhhhccccchhhHHH
Q 045564 157 KAPSKVQFAVLYSGIALACLGLGGLRFTLATMGANQFEIPQHQGIFFNWFFILTYASTVISSAAFVYIEDNLSWRLGSGL 236 (296)
Q Consensus 157 ~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~~~ad~f~~~~~r~~~f~~~y~~~~iG~~i~p~v~~~l~~~~gw~~~F~i 236 (296)
+...++++|++.|++.+...+...+...|.+|+ ++|.+.++++..+.++|..+||.+++++.+..|||+.|++
T Consensus 103 ------~~~~l~~~r~l~Gi~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~~lg~~l~~~~gw~~~f~~ 175 (413)
T PRK15403 103 ------SMTQFLIARFIQGTSICFIATVGYVTVQEAFGQ-TKGIKLMAIITSIVLVAPIIGPLSGAALMHFVHWKVLFAI 175 (413)
T ss_pred ------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHH
Confidence 356788999999999887677777888999984 4678889998999999999999999999988899999999
Q ss_pred HHHHHHHHHHH
Q 045564 237 NIAANLAGVVI 247 (296)
Q Consensus 237 ~~~~~~~~~~~ 247 (296)
.++..+++++.
T Consensus 176 ~~~~~~i~~~~ 186 (413)
T PRK15403 176 IAVMGLIAFVG 186 (413)
T ss_pred HHHHHHHHHHH
Confidence 88766665544
No 31
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=99.66 E-value=2.4e-15 Score=143.09 Aligned_cols=149 Identities=17% Similarity=0.186 Sum_probs=123.6
Q ss_pred HHHHHhCCC--------hhHHHHHHHHHHHHHHHHHHHHHHHhhhhcchHHHHHHHHHHHHHHHHHHHhhccccCCCCCc
Q 045564 77 YMIQEFHIT--------SINSALISNIVNGFVNLFPVLGAIIADSFLGSFQVIWISSFISLLGTILLDSTATFDSLRPQR 148 (296)
Q Consensus 77 yl~~~lg~s--------~~~a~~i~~~~~~~~~~~~l~~G~laDr~iGR~~~i~i~~~l~~ig~~~la~~~~~p~~~~~~ 148 (296)
....+++.+ ..+.+++.+++.++..++.++.|+++|| +|||+++.++.++..++.++..+....
T Consensus 53 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~-~grr~~~~~~~~~~~~~~~~~~~~~~~------- 124 (481)
T TIGR00879 53 LPAFEFKFTSANSDSYSSSLWGLVVSIFLVGGFIGALFAGWLSDR-FGRKKSLLIIALLFVIGAILMGLAAFA------- 124 (481)
T ss_pred cHHHHHhcCCcccCCCChhHHHHHHHHHHHHHHHHHHHhhHhhhh-hhhHHHHHHHHHHHHHHHHHHHHhccc-------
Confidence 444555555 8899999999999999999999999999 799999999999999888777554310
Q ss_pred cCCCCcCcCCCCchhhHHHHHHHHHHHHhhchhhhhhhhhhhccCCCccchhhHHHHHHHHHHHHHHHHHHHH---Hhhh
Q 045564 149 CDIGLSLCKAPSKVQFAVLYSGIALACLGLGGLRFTLATMGANQFEIPQHQGIFFNWFFILTYASTVISSAAF---VYIE 225 (296)
Q Consensus 149 c~~~~~~~~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~~~ad~f~~~~~r~~~f~~~y~~~~iG~~i~p~v~---~~l~ 225 (296)
.+.+.++++|++.|+|.+...+...++++|.+|++ +|+...++++.+.++|..+++.++ ..+.
T Consensus 125 -------------~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~-~r~~~~~~~~~~~~~G~~~~~~~~~~~~~~~ 190 (481)
T TIGR00879 125 -------------LSVEMLIVGRVLLGIGVGIASALVPMYLSEIAPKA-LRGALTSLYQLAITFGILVAYGFGSGKVSLN 190 (481)
T ss_pred -------------cchHHHHHHHHHHHhhhhHHHhHHHHHHHccCChh-hhhhhhhHHHHHHHHHHHHHHHHHHHhhcCC
Confidence 12457889999999999999999999999999844 789999999999999999999988 6666
Q ss_pred ccccchhhHHHHHHHHHHHHHH
Q 045564 226 DNLSWRLGSGLNIAANLAGVVI 247 (296)
Q Consensus 226 ~~~gw~~~F~i~~~~~~~~~~~ 247 (296)
+..+||+.|++.++..++.++.
T Consensus 191 ~~~~w~~~f~~~~~~~~~~~~~ 212 (481)
T TIGR00879 191 NTLGWRIPLGLQLIPAGLLFLG 212 (481)
T ss_pred CCccHHHHHHHHHHHHHHHHHH
Confidence 7789999999976655544433
No 32
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=99.66 E-value=8.3e-15 Score=138.46 Aligned_cols=169 Identities=13% Similarity=0.084 Sum_probs=132.5
Q ss_pred CCchhHHHHHHHHH-H-hHHHhHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhcchHHHHHHHHHHH
Q 045564 51 GGRTALLSRTVTCL-T-LGEGWVANLMVYMIQEFHITSINSALISNIVNGFVNLFPVLGAIIADSFLGSFQVIWISSFIS 128 (296)
Q Consensus 51 ~~~~~~~~l~~~~~-~-~~y~~~~~l~~yl~~~lg~s~~~a~~i~~~~~~~~~~~~l~~G~laDr~iGR~~~i~i~~~l~ 128 (296)
+.+|.+..+..... . ...........++.+++|.|..+.+++.+++.....++.++.|+++|| +||||++.++.++.
T Consensus 5 ~~~~~l~~~~~~~~~~~~~~~~~~p~~~~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr-~grr~~~~~~~~~~ 83 (394)
T PRK11652 5 RNVNLLFMLVLLVAVGQMAQTIYVPAIADMARDLNVREGAVQAVMAAYLLTYGLSQLFYGPLSDR-VGRRPVILVGMSIF 83 (394)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHh-cCChHHHHHHHHHH
Confidence 34555554444444 2 222233333445668999999999999999999999999999999999 79999999999888
Q ss_pred HHHHHHHHhhccccCCCCCccCCCCcCcCCCCchhhHHHHHHHHHHHHhhchhhhhhhhhhhccCCCccchhhHHHHHHH
Q 045564 129 LLGTILLDSTATFDSLRPQRCDIGLSLCKAPSKVQFAVLYSGIALACLGLGGLRFTLATMGANQFEIPQHQGIFFNWFFI 208 (296)
Q Consensus 129 ~ig~~~la~~~~~p~~~~~~c~~~~~~~~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~~~ad~f~~~~~r~~~f~~~y~ 208 (296)
.++.++..... +...+++.|++.|++.+...+....+..|.+++ ++++...+++..
T Consensus 84 ~~~~~~~~~~~-----------------------~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 139 (394)
T PRK11652 84 ILGTLVALFAH-----------------------SLTVLIAASAIQGLGTGVGGVMARTLPRDLYEG-TQLRHANSLLNM 139 (394)
T ss_pred HHHHHHHHHHc-----------------------cHHHHHHHHHHHHhhhhHHHHHHHHHHHHhcCH-HHHHHHHHHHHH
Confidence 88776655432 346788889999999888778888888898874 467788888888
Q ss_pred HHHHHHHHHHHHHHhhhccccchhhHHHHHHHHHHH
Q 045564 209 LTYASTVISSAAFVYIEDNLSWRLGSGLNIAANLAG 244 (296)
Q Consensus 209 ~~~iG~~i~p~v~~~l~~~~gw~~~F~i~~~~~~~~ 244 (296)
+..+|..++|.+++++.+..|||+.|++.++..++.
T Consensus 140 ~~~~~~~~g~~i~~~l~~~~g~~~~f~~~~~~~~~~ 175 (394)
T PRK11652 140 GILVSPLLAPLIGGLLTTLFGWRACYLFLLLLGAGV 175 (394)
T ss_pred HHHHHHHHHHHHHHHHHhccChHHHHHHHHHHHHHH
Confidence 999999999999999988889999999877655443
No 33
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.66 E-value=7e-15 Score=135.58 Aligned_cols=155 Identities=8% Similarity=-0.040 Sum_probs=129.5
Q ss_pred HHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhcchHHHHHHHHHHHHHHHHHHHhhccccCCCCCccCC
Q 045564 72 ANLMVYMIQEFHITSINSALISNIVNGFVNLFPVLGAIIADSFLGSFQVIWISSFISLLGTILLDSTATFDSLRPQRCDI 151 (296)
Q Consensus 72 ~~l~~yl~~~lg~s~~~a~~i~~~~~~~~~~~~l~~G~laDr~iGR~~~i~i~~~l~~ig~~~la~~~~~p~~~~~~c~~ 151 (296)
..++.|. .+++.+..+.+++.+++.++..++.++.|+++|| +||||++.++.++..++.+++.+....+
T Consensus 20 ~~~~~~~-~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr-~g~r~~~~~~~~~~~~~~~~~~~~~~~~--------- 88 (365)
T TIGR00900 20 VALPLYV-LAGTGSASVLSLAALAGMLPYVVLSPIAGALADR-YDRKKVMIGADLIRAVLVAVLPFVALLG--------- 88 (365)
T ss_pred HHHHHHH-HHhhccHHHHHHHHHHHHHHHHHHHHhhhHHHHh-hchhHHHHHHHHHHHHHHHHHHHHHHcC---------
Confidence 3445555 4689999999999999999999999999999999 7999999999988877776665543110
Q ss_pred CCcCcCCCCchhhHHHHHHHHHHHHhhchhhhhhhhhhhccCCCccchhhHHHHHHHHHHHHHHHHHHHHHhhhccccch
Q 045564 152 GLSLCKAPSKVQFAVLYSGIALACLGLGGLRFTLATMGANQFEIPQHQGIFFNWFFILTYASTVISSAAFVYIEDNLSWR 231 (296)
Q Consensus 152 ~~~~~~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~~~ad~f~~~~~r~~~f~~~y~~~~iG~~i~p~v~~~l~~~~gw~ 231 (296)
..+.+.++++|++.+++.+...+...++++|.+|++ +|++.+++++.+.++|..++|.+++++.+..||+
T Consensus 89 ---------~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~g~~ 158 (365)
T TIGR00900 89 ---------GLNIWQVYVLAGILAIAQAFFTPAYQAMLPDLVPEE-QLTQANSLSQAVRSLFYIVGPGIGGLMYATLGIK 158 (365)
T ss_pred ---------CCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHH-HHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhhHH
Confidence 014567888999999999999999999999999954 7899999999999999999999999999889999
Q ss_pred hhHHHHHHHHHHHHHH
Q 045564 232 LGSGLNIAANLAGVVI 247 (296)
Q Consensus 232 ~~F~i~~~~~~~~~~~ 247 (296)
+.|++.++..+++.+.
T Consensus 159 ~~~~~~~~~~~~~~~~ 174 (365)
T TIGR00900 159 WAIWVDAVGFAISALL 174 (365)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 9999887765554443
No 34
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.66 E-value=3.2e-15 Score=138.44 Aligned_cols=151 Identities=11% Similarity=0.027 Sum_probs=131.6
Q ss_pred HHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhcchHHHHHHHHHHHHHHHHHHHhhccccCCCCCccCC
Q 045564 72 ANLMVYMIQEFHITSINSALISNIVNGFVNLFPVLGAIIADSFLGSFQVIWISSFISLLGTILLDSTATFDSLRPQRCDI 151 (296)
Q Consensus 72 ~~l~~yl~~~lg~s~~~a~~i~~~~~~~~~~~~l~~G~laDr~iGR~~~i~i~~~l~~ig~~~la~~~~~p~~~~~~c~~ 151 (296)
....+++.+++|.+..+.+++.+++.++..++.++.|+++|| +|||+++.++.++..++.++++++.
T Consensus 14 ~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~-~g~r~~~~~~~~~~~~~~~~~~~~~------------ 80 (399)
T TIGR00893 14 SFAAPMLQEDLGLSAAQYGYVFSAFSWGYVVGQFPGGWLLDR-FGARKTLAVFIVIWGVFTGLQAFAG------------ 80 (399)
T ss_pred hHhHHHHHHhhCCChhhHHHHHHHHHHHHHHHHHhHHHHHHh-cCcceeeHHHHHHHHHHHHHHHHHc------------
Confidence 344456888999999999999999999999999999999999 7999999999998888877766542
Q ss_pred CCcCcCCCCchhhHHHHHHHHHHHHhhchhhhhhhhhhhccCCCccchhhHHHHHHHHHHHHHHHHHHHHHhhhccccch
Q 045564 152 GLSLCKAPSKVQFAVLYSGIALACLGLGGLRFTLATMGANQFEIPQHQGIFFNWFFILTYASTVISSAAFVYIEDNLSWR 231 (296)
Q Consensus 152 ~~~~~~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~~~ad~f~~~~~r~~~f~~~y~~~~iG~~i~p~v~~~l~~~~gw~ 231 (296)
+...++++|++.|++.+...+...+++.|.+|+ ++|++.++++....++|..++|.+.+++.+..+|+
T Consensus 81 -----------~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~-~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~ 148 (399)
T TIGR00893 81 -----------AYVSLYILRVLLGAAEAPFFPGIILIVASWFPA-SERATAVSIFNSAQGLGGIIGGPLVGWILIHFSWQ 148 (399)
T ss_pred -----------CHHHHHHHHHHHHHHHHhhhhHHHHHHHHhCCH-HHHHHHHHHHHHhchHHHHHHHHHHHHHHHhCCch
Confidence 356788999999999999999999999999984 47899999999999999999999999998889999
Q ss_pred hhHHHHHHHHHHHHHH
Q 045564 232 LGSGLNIAANLAGVVI 247 (296)
Q Consensus 232 ~~F~i~~~~~~~~~~~ 247 (296)
+.|++.++..++..++
T Consensus 149 ~~~~~~~~~~~~~~~~ 164 (399)
T TIGR00893 149 WAFIIEGVLGIIWGVL 164 (399)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 9999887765554443
No 35
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=99.65 E-value=8.5e-15 Score=138.51 Aligned_cols=150 Identities=13% Similarity=0.047 Sum_probs=118.2
Q ss_pred hHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhcchHHHHHHHHHHHHHHHHHHHhhccccCCCCCcc
Q 045564 70 WVANLMVYMIQEFHITSINSALISNIVNGFVNLFPVLGAIIADSFLGSFQVIWISSFISLLGTILLDSTATFDSLRPQRC 149 (296)
Q Consensus 70 ~~~~l~~yl~~~lg~s~~~a~~i~~~~~~~~~~~~l~~G~laDr~iGR~~~i~i~~~l~~ig~~~la~~~~~p~~~~~~c 149 (296)
...+..+.+.+++|++..+.+++.+.+.++..++.+..|+++|| +|||+++..+.+....+.+ .....
T Consensus 9 ~~~~~lp~i~~~~~~s~~~~g~~~s~~~~g~~i~~~~~G~l~Dr-~grr~~~~~~~~~~~~~~~-~~~~~---------- 76 (368)
T TIGR00903 9 TFSPVLSLVAEDIDVSKEELGLLAITYPAAFLALTIPSGLLLDR-AFKRWFLFGSLATFAAAAG-RLLDP---------- 76 (368)
T ss_pred HHHhhHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-ccchHHHHHHHHHHHHHHH-HHHHh----------
Confidence 33455567788999999999999999999999999999999999 7999887655544443322 11111
Q ss_pred CCCCcCcCCCCchhhHHHHHHHHHHHHhhchhhhhhhhhhhccCCCccchhhHHHHHHHHHHHHHHHHHHHHHhhhcccc
Q 045564 150 DIGLSLCKAPSKVQFAVLYSGIALACLGLGGLRFTLATMGANQFEIPQHQGIFFNWFFILTYASTVISSAAFVYIEDNLS 229 (296)
Q Consensus 150 ~~~~~~~~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~~~ad~f~~~~~r~~~f~~~y~~~~iG~~i~p~v~~~l~~~~g 229 (296)
.+...++++|++.|+|.+.. .+.....+|.+|+ ++|++..+++..+.++|..+++++++++.+.+|
T Consensus 77 ------------~~~~~l~~~R~l~G~g~~~~-~~~~~~~~~~~~~-~~r~~a~~~~~~~~~lG~~l~~~~~~~l~~~~g 142 (368)
T TIGR00903 77 ------------FNYEWLLACQLLAALGQPFL-LNAFAPAASQIRE-ERRDLVISLLSFAMYLGIIFALAAGLKIYTAGG 142 (368)
T ss_pred ------------ccHHHHHHHHHHHHhHhHHH-HHHHHHHHHHcCH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccc
Confidence 13567899999999999864 4555556899984 579999999999999999999999999999999
Q ss_pred chhhHHHHHHHHHHHH
Q 045564 230 WRLGSGLNIAANLAGV 245 (296)
Q Consensus 230 w~~~F~i~~~~~~~~~ 245 (296)
||+.|.+.++..++..
T Consensus 143 Wr~~f~~~~~l~~~~~ 158 (368)
T TIGR00903 143 LQLLIIPIAAVAAAGI 158 (368)
T ss_pred hHHHHHHHHHHHHHHH
Confidence 9999998666544433
No 36
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.65 E-value=6.6e-15 Score=136.11 Aligned_cols=168 Identities=15% Similarity=0.076 Sum_probs=134.3
Q ss_pred chhHHHHHHHHH-H-hHHHhHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhcchHHHHHHHHHHHHH
Q 045564 53 RTALLSRTVTCL-T-LGEGWVANLMVYMIQEFHITSINSALISNIVNGFVNLFPVLGAIIADSFLGSFQVIWISSFISLL 130 (296)
Q Consensus 53 ~~~~~~l~~~~~-~-~~y~~~~~l~~yl~~~lg~s~~~a~~i~~~~~~~~~~~~l~~G~laDr~iGR~~~i~i~~~l~~i 130 (296)
|+.+...+...+ . ..|. ...+.+++.+++|++..+.+++.+++.++..++.++.|+++|| +|||+++.++.++..+
T Consensus 3 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~d~-~G~r~~~~~~~~~~~~ 80 (377)
T TIGR00890 3 WYVLVGTVIMCFTSGYVYT-WTLLAPPLGRYFGVGVTAVAIWFTLLLIGLAMSMPVGGLLADK-FGPRAVAMLGGILYGL 80 (377)
T ss_pred EEEeHHHHHHHHHhhHHhh-hhhHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHH-cCccchhHHhHHHHHH
Confidence 444444444444 3 4443 3455678889999999999999999999999999999999999 7999999999999999
Q ss_pred HHHHHHhhccccCCCCCccCCCCcCcCCCCchhhHHHHHHHHHHHHhhchhhhhhhhhhhccCCCccchhhHHHHHHHHH
Q 045564 131 GTILLDSTATFDSLRPQRCDIGLSLCKAPSKVQFAVLYSGIALACLGLGGLRFTLATMGANQFEIPQHQGIFFNWFFILT 210 (296)
Q Consensus 131 g~~~la~~~~~p~~~~~~c~~~~~~~~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~~~ad~f~~~~~r~~~f~~~y~~~ 210 (296)
+.+..+++. +...++++|++.|++.+...+.......+.+| + +|+...+++..+.
T Consensus 81 ~~~~~~~~~-----------------------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~ 135 (377)
T TIGR00890 81 GFTFYAIAD-----------------------SLAALYLTYGLASAGVGIAYGIALNTAVKWFP-D-KRGLASGIIIGGY 135 (377)
T ss_pred HHHHHHHHH-----------------------HHHHHHHHHHHHhHHHHHHHHhHHHHHHHHcC-c-ccHHHHHHHHHhc
Confidence 887766543 45678889999999999888878888888887 3 5888999988888
Q ss_pred HHHHHHHHHHHHhhhccccchhhHHHHHHHHHHHHHH
Q 045564 211 YASTVISSAAFVYIEDNLSWRLGSGLNIAANLAGVVI 247 (296)
Q Consensus 211 ~iG~~i~p~v~~~l~~~~gw~~~F~i~~~~~~~~~~~ 247 (296)
++|..+++.+.+.+.+..|||+.|++.++..++..+.
T Consensus 136 ~~g~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~ 172 (377)
T TIGR00890 136 GLGSFILSPLITSVINLEGVPAAFIYMGIIFLLVIVL 172 (377)
T ss_pred chhHhHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHH
Confidence 8998887777777777789999999988765554433
No 37
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=99.65 E-value=9.5e-15 Score=141.24 Aligned_cols=151 Identities=8% Similarity=-0.003 Sum_probs=120.1
Q ss_pred CCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhcchHHHHHHHHHHHHHHHHHHHhhccccCCCCCccCCCCcCcCCCCch
Q 045564 83 HITSINSALISNIVNGFVNLFPVLGAIIADSFLGSFQVIWISSFISLLGTILLDSTATFDSLRPQRCDIGLSLCKAPSKV 162 (296)
Q Consensus 83 g~s~~~a~~i~~~~~~~~~~~~l~~G~laDr~iGR~~~i~i~~~l~~ig~~~la~~~~~p~~~~~~c~~~~~~~~~~~~~ 162 (296)
+.+..+.+++.+++.++..++++++|+++|| +||||++.++.+++.++.+..+++.+ .... . ..++..
T Consensus 51 ~~~~~~~~~~~s~~~ig~~~~~~~~G~l~dr-~Grr~~~~~~~~l~~i~~~~~~~~~~-~~~~---------~-~~~~~~ 118 (479)
T PRK10077 51 SAANSLLGFCVASALIGCIIGGALGGYCSNR-FGRRDSLKIAAVLFFISALGSAWPEF-GFTS---------I-GPDNTG 118 (479)
T ss_pred cCChhHHHHHHHHHHHHHHHHHHHHHHHHHH-hccHHHHHHHHHHHHHHHHHHHhhcc-cccc---------c-cccchh
Confidence 8888999999999999999999999999999 79999999999999888877665421 1000 0 001112
Q ss_pred hhHHHHHHHHHHHHhhchhhhhhhhhhhccCCCccchhhHHHHHHHHHHHHHHHHHHHHHhhh--------ccccchhhH
Q 045564 163 QFAVLYSGIALACLGLGGLRFTLATMGANQFEIPQHQGIFFNWFFILTYASTVISSAAFVYIE--------DNLSWRLGS 234 (296)
Q Consensus 163 ~~~~l~~~~~l~gig~g~~~~~~~~~~ad~f~~~~~r~~~f~~~y~~~~iG~~i~p~v~~~l~--------~~~gw~~~F 234 (296)
....++++|++.|++.|+..+...++++|.+|+ ++|+...+++..+..+|..+++.++..+. +..|||+.|
T Consensus 119 ~~~~l~~~R~l~G~~~g~~~~~~~~~i~e~~~~-~~rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~gWr~~f 197 (479)
T PRK10077 119 YVPEFVIYRIIGGIGVGLASMLSPMYIAEIAPA-HIRGKLVSFNQFAIIFGQLVVYFVNYFIARSGDASWLNTDGWRYMF 197 (479)
T ss_pred HHHHHHHHHHHHhhhHhHHhhHHHHHHHhhCCh-hhhhHHHHHHHHHHHHHHHHHHHHHHHHhccCcccccccCChHHHH
Confidence 345678999999999999999999999999994 47899999988888999988887665443 356999999
Q ss_pred HHHHHHHHHHHH
Q 045564 235 GLNIAANLAGVV 246 (296)
Q Consensus 235 ~i~~~~~~~~~~ 246 (296)
++.++..++..+
T Consensus 198 ~~~~~~~~~~~~ 209 (479)
T PRK10077 198 ASEAIPALLFLM 209 (479)
T ss_pred HHHHHHHHHHHH
Confidence 988776555443
No 38
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=99.65 E-value=2.2e-14 Score=137.81 Aligned_cols=159 Identities=15% Similarity=0.146 Sum_probs=116.3
Q ss_pred hHHHHHHHHHHHhC---CChhHHHHHH---HHHHHHHHHHHHHHHHHhhhhcchHHHHHHHHHHHHHHHHHHHhhccccC
Q 045564 70 WVANLMVYMIQEFH---ITSINSALIS---NIVNGFVNLFPVLGAIIADSFLGSFQVIWISSFISLLGTILLDSTATFDS 143 (296)
Q Consensus 70 ~~~~l~~yl~~~lg---~s~~~a~~i~---~~~~~~~~~~~l~~G~laDr~iGR~~~i~i~~~l~~ig~~~la~~~~~p~ 143 (296)
....+..++.++++ .+..+.+.+. +...++..++.+++|+++|| +||||++.++.+++.++.++.+++. .
T Consensus 40 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~~~G~l~Dr-~Grr~~l~~~~~~~~~~~~~~~~~~---~ 115 (432)
T PRK10406 40 VYSFCSLYFAHIFFPSGNTTTQLLQTAGVFAAGFLMRPIGGWLFGRIADK-HGRKKSMLISVCMMCFGSLVIACLP---G 115 (432)
T ss_pred HHHHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cCcHHHHHHHHHHHHHHHHHHhhcC---C
Confidence 44566668888874 4555433333 33444455899999999999 7999999999999999888776542 2
Q ss_pred CCCCccCCCCcCcCCCCchhhHHHHHHHHHHHHhhchhhhhhhhhhhccCCCccchhhHHHHHHHHHHHHHHHHHHHHHh
Q 045564 144 LRPQRCDIGLSLCKAPSKVQFAVLYSGIALACLGLGGLRFTLATMGANQFEIPQHQGIFFNWFFILTYASTVISSAAFVY 223 (296)
Q Consensus 144 ~~~~~c~~~~~~~~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~~~ad~f~~~~~r~~~f~~~y~~~~iG~~i~p~v~~~ 223 (296)
+.. -.......+++.|++.|++.|+..+...++++|.+|++ +|+...++.+.+.+.|..+++.+...
T Consensus 116 ~~~------------~~~~~~~~l~~~R~l~G~g~g~~~~~~~~~i~e~~p~~-~rg~~~~~~~~~~~~G~~~~~~~~~~ 182 (432)
T PRK10406 116 YET------------IGTWAPALLLLARLFQGLSVGGEYGTSATYMSEVAVEG-RKGFYASFQYVTLIGGQLLALLVVVV 182 (432)
T ss_pred chh------------HHHHHHHHHHHHHHHHHhhhhhhHhhHHHHHHHhCCCC-cccHHHHHHHHHHHHHHHHHHHHHHH
Confidence 100 00012346888999999999999999999999999954 68888888888888888888766554
Q ss_pred hh--------ccccchhhHHHHHHHHHHHH
Q 045564 224 IE--------DNLSWRLGSGLNIAANLAGV 245 (296)
Q Consensus 224 l~--------~~~gw~~~F~i~~~~~~~~~ 245 (296)
+. ..+|||+.|++.++..++.+
T Consensus 183 ~~~~~~~~~~~~~gWr~~F~i~~~~~ll~~ 212 (432)
T PRK10406 183 LQQTLEDAELREWGWRIPFALGAVLAVVAL 212 (432)
T ss_pred HHHhCCHHHHhccchHHHHHHHHHHHHHHH
Confidence 43 25799999998777555443
No 39
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.64 E-value=1.4e-14 Score=139.45 Aligned_cols=147 Identities=11% Similarity=0.074 Sum_probs=125.6
Q ss_pred HHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhcchHHHHHHHHHHHHHHHHHHHhhccccCCCCCccCC
Q 045564 72 ANLMVYMIQEFHITSINSALISNIVNGFVNLFPVLGAIIADSFLGSFQVIWISSFISLLGTILLDSTATFDSLRPQRCDI 151 (296)
Q Consensus 72 ~~l~~yl~~~lg~s~~~a~~i~~~~~~~~~~~~l~~G~laDr~iGR~~~i~i~~~l~~ig~~~la~~~~~p~~~~~~c~~ 151 (296)
..++ .+.+++|++..+.+++.+.+.++..++.+++|+++|| +|||+++.++.++..++.++++...
T Consensus 44 ~~~~-~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr-~g~r~~~~~~~~~~~~~~~~~~~~~------------ 109 (434)
T PRK11663 44 AAMP-EMLADLGLSRSDIGLLATLFYITYGVSKFVSGIVSDR-SNARYFMGIGLIATGIINILFGFSS------------ 109 (434)
T ss_pred HhhH-HHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhhHHHhh-cCCchhHHHHHHHHHHHHHHHHHHh------------
Confidence 3344 4456799999999999999999999999999999999 7999999999999888877665442
Q ss_pred CCcCcCCCCchhhHHHHHHHHHHHHhhchhhhhhhhhhhccCCCccchhhHHHHHHHHHHHHHHHHHHHHHhhhccccch
Q 045564 152 GLSLCKAPSKVQFAVLYSGIALACLGLGGLRFTLATMGANQFEIPQHQGIFFNWFFILTYASTVISSAAFVYIEDNLSWR 231 (296)
Q Consensus 152 ~~~~~~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~~~ad~f~~~~~r~~~f~~~y~~~~iG~~i~p~v~~~l~~~~gw~ 231 (296)
+...+++.|++.+++.|...+...+++.|.+|+ ++|+...++++.+.++|..++|.+.+++.+.+|||
T Consensus 110 -----------~~~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~-~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~gw~ 177 (434)
T PRK11663 110 -----------SLWAFALLWVLNAFFQGWGWPVCAKLLTAWYSR-TERGGWWAIWNTAHNVGGALIPLVVGAIALHYGWR 177 (434)
T ss_pred -----------HHHHHHHHHHHHHHHHHccchHHHHHHHHhCCH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHH
Confidence 345677788899999888888899999999984 47899999999999999999999999999889999
Q ss_pred hhHHHHHHHHHHH
Q 045564 232 LGSGLNIAANLAG 244 (296)
Q Consensus 232 ~~F~i~~~~~~~~ 244 (296)
+.|++.++..++.
T Consensus 178 ~~f~~~~i~~~~~ 190 (434)
T PRK11663 178 YGMMIAGIIAIVV 190 (434)
T ss_pred HHHHHHHHHHHHH
Confidence 9999887754433
No 40
>PRK03699 putative transporter; Provisional
Probab=99.64 E-value=2.8e-14 Score=135.36 Aligned_cols=171 Identities=9% Similarity=-0.034 Sum_probs=132.5
Q ss_pred CCchhHHHHHHHHH-H-hHHHhHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhcchHHHHHHHHHHH
Q 045564 51 GGRTALLSRTVTCL-T-LGEGWVANLMVYMIQEFHITSINSALISNIVNGFVNLFPVLGAIIADSFLGSFQVIWISSFIS 128 (296)
Q Consensus 51 ~~~~~~~~l~~~~~-~-~~y~~~~~l~~yl~~~lg~s~~~a~~i~~~~~~~~~~~~l~~G~laDr~iGR~~~i~i~~~l~ 128 (296)
+|+|..+..++..+ . ........+...+.+++|+|..+.+++.+.+.++..++.+++|+++|| +||||++.++.++.
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~i~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr-~g~r~~~~~~~~~~ 82 (394)
T PRK03699 4 NRIKLTWISFLSYALTGALVIVTGMVMGPIAEYFNLPVSSMSNTFTFLNAGILISIFLNAWLMEI-IPLKRQLIFGFALM 82 (394)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hhHHHHHHHHHHHH
Confidence 35555554444444 3 222223333344668899999999999999999999999999999999 79999999999888
Q ss_pred HHHHHHHHhhccccCCCCCccCCCCcCcCCCCchhhHHHHHHHHHHHHhhchhhhhhhhhhhccCCCccchhhHHHHHHH
Q 045564 129 LLGTILLDSTATFDSLRPQRCDIGLSLCKAPSKVQFAVLYSGIALACLGLGGLRFTLATMGANQFEIPQHQGIFFNWFFI 208 (296)
Q Consensus 129 ~ig~~~la~~~~~p~~~~~~c~~~~~~~~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~~~ad~f~~~~~r~~~f~~~y~ 208 (296)
.++.+++.+.. +...+++.|++.|++.|...+...+.+.|.+|++ +|+...+..+.
T Consensus 83 ~i~~~l~~~~~-----------------------~~~~~~~~~~l~G~~~g~~~~~~~~~i~~~~~~~-~r~~~~~~~~~ 138 (394)
T PRK03699 83 ILAVAGLMFSH-----------------------SLALFSIAMFVLGVVSGITMSIGTFLITHVYEGK-QRGSRLLFTDS 138 (394)
T ss_pred HHHHHHHHHcc-----------------------hHHHHHHHHHHHHHhhHhhccchhHHhhhhcccc-hHHHHHHHHHH
Confidence 88777665432 3467788899999999988888899999999854 68888888777
Q ss_pred HHHHHHHHHHHHHHhhhc-cccchhhHHHHHHHHHHHHH
Q 045564 209 LTYASTVISSAAFVYIED-NLSWRLGSGLNIAANLAGVV 246 (296)
Q Consensus 209 ~~~iG~~i~p~v~~~l~~-~~gw~~~F~i~~~~~~~~~~ 246 (296)
..++|+.++|.+.+++.. ..|||+.|.+.++..++..+
T Consensus 139 ~~~~g~~~~~~~~~~l~~~~~gw~~~f~~~~~~~~~~~~ 177 (394)
T PRK03699 139 FFSMAGMIFPIIAAYLLARSIEWYWVYACIGLVYVAIFI 177 (394)
T ss_pred HHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHH
Confidence 888999999999888754 57999999987775554443
No 41
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.63 E-value=1.9e-14 Score=136.68 Aligned_cols=146 Identities=11% Similarity=-0.024 Sum_probs=123.4
Q ss_pred HHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhcchHHHHHHHHHHHHHHHHHHHhhccccCCCCCccCCCCcCc
Q 045564 77 YMIQEFHITSINSALISNIVNGFVNLFPVLGAIIADSFLGSFQVIWISSFISLLGTILLDSTATFDSLRPQRCDIGLSLC 156 (296)
Q Consensus 77 yl~~~lg~s~~~a~~i~~~~~~~~~~~~l~~G~laDr~iGR~~~i~i~~~l~~ig~~~la~~~~~p~~~~~~c~~~~~~~ 156 (296)
.+.+++|.+..+.++..+.+.++..++.++.|+++|| +||||++.++.++..++.+....+.
T Consensus 38 ~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~dr-~g~r~~l~~~~~~~~~~~~~~~~~~----------------- 99 (406)
T PRK15402 38 AVVEDFNAGAEWVPTSMTAYLAGGMFLQWLLGPLSDR-IGRRPVMLAGVAFFILTCLAILLAQ----------------- 99 (406)
T ss_pred HHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCChHHHHHHHHHHHHHHHHHHHHc-----------------
Confidence 4568899999999999999999999999999999999 7999999999988888776655432
Q ss_pred CCCCchhhHHHHHHHHHHHHhhchhhhhhhhhhhccCCCccchhhHHHHHHHHHHHHHHHHHHHHHhhhccccchhhHHH
Q 045564 157 KAPSKVQFAVLYSGIALACLGLGGLRFTLATMGANQFEIPQHQGIFFNWFFILTYASTVISSAAFVYIEDNLSWRLGSGL 236 (296)
Q Consensus 157 ~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~~~ad~f~~~~~r~~~f~~~y~~~~iG~~i~p~v~~~l~~~~gw~~~F~i 236 (296)
+...+++.|++.|++.+...+...+.+.|.+|++ +|.+..++.+....+|..++|.+++++.+..+|++.|++
T Consensus 100 ------~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~~w~~~~~~ 172 (406)
T PRK15402 100 ------SIEQFTLLRFLQGIGLCFIGAVGYAAIQESFEEA-DAIKITALMANVALLAPLLGPLVGAALIHVLPWRGMFVL 172 (406)
T ss_pred ------cHHHHHHHHHHHHhHhhhHHHHHHHHHHHHhChh-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCccHHHHH
Confidence 3456788899999999988888899999999854 677788887777788999999999999888899999998
Q ss_pred HHHHHHHHHHH
Q 045564 237 NIAANLAGVVI 247 (296)
Q Consensus 237 ~~~~~~~~~~~ 247 (296)
.+++.++..+.
T Consensus 173 ~~~~~~~~~~~ 183 (406)
T PRK15402 173 FAALAALSFFG 183 (406)
T ss_pred HHHHHHHHHHH
Confidence 87766655543
No 42
>PRK11043 putative transporter; Provisional
Probab=99.63 E-value=3.7e-14 Score=134.33 Aligned_cols=158 Identities=11% Similarity=0.047 Sum_probs=128.1
Q ss_pred hHHHhHHHHHHH--HHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhcchHHHHHHHHHHHHHHHHHHHhhccccC
Q 045564 66 LGEGWVANLMVY--MIQEFHITSINSALISNIVNGFVNLFPVLGAIIADSFLGSFQVIWISSFISLLGTILLDSTATFDS 143 (296)
Q Consensus 66 ~~y~~~~~l~~y--l~~~lg~s~~~a~~i~~~~~~~~~~~~l~~G~laDr~iGR~~~i~i~~~l~~ig~~~la~~~~~p~ 143 (296)
++++...++|.+ +.+++|.+..+.+++.+++.++..++.++.|+++|| +|||+++.++.++..++.++..+..
T Consensus 18 ~~~~~~~~~p~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr-~g~r~~~~~~~~~~~~~~~~~~~~~---- 92 (401)
T PRK11043 18 GFLATDMYLPAFKAIQADLQTSASAVSASLSLFLAGFALGQLLWGPLSDR-YGRKPVLLAGLSLFALGSLGMLWVE---- 92 (401)
T ss_pred HHHHHHHHHhhHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHhhhhHHhh-cCCcHHHHHHHHHHHHHHHHHHHhc----
Confidence 344433444433 678999999999999999999999999999999999 7999999999888887776655432
Q ss_pred CCCCccCCCCcCcCCCCchhhHHHHHHHHHHHHhhchhhhhhhhhhhccCCCccchhhHHHHHHHHHHHHHHHHHHHHHh
Q 045564 144 LRPQRCDIGLSLCKAPSKVQFAVLYSGIALACLGLGGLRFTLATMGANQFEIPQHQGIFFNWFFILTYASTVISSAAFVY 223 (296)
Q Consensus 144 ~~~~~c~~~~~~~~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~~~ad~f~~~~~r~~~f~~~y~~~~iG~~i~p~v~~~ 223 (296)
+...+++.|++.|++.+...+...+++.|.+|++ ++...++......++|..++|.++++
T Consensus 93 -------------------~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~i~~~ 152 (401)
T PRK11043 93 -------------------SAAQLLVLRFVQAVGVCSAAVIWQALVIDRYPAQ-KANRVFATIMPLVALSPALAPLLGAW 152 (401)
T ss_pred -------------------CHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCcH-HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3466788899999998887788888899999844 57777888777888999999999999
Q ss_pred hhccccchhhHHHHHHHHHHHHHHH
Q 045564 224 IEDNLSWRLGSGLNIAANLAGVVIF 248 (296)
Q Consensus 224 l~~~~gw~~~F~i~~~~~~~~~~~~ 248 (296)
+.+.+|||+.|++..+..++..+..
T Consensus 153 l~~~~g~~~~~~~~~~~~~~~~~~~ 177 (401)
T PRK11043 153 LLNHFGWQAIFATLFAITLLLILPT 177 (401)
T ss_pred HHhcCChHHHHHHHHHHHHHHHHHH
Confidence 9998999999998877665554433
No 43
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.63 E-value=2.5e-14 Score=135.95 Aligned_cols=152 Identities=13% Similarity=0.157 Sum_probs=128.0
Q ss_pred hHHHhHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhcchHHHHHHHHHHHHHHHHHHHhhccccCCC
Q 045564 66 LGEGWVANLMVYMIQEFHITSINSALISNIVNGFVNLFPVLGAIIADSFLGSFQVIWISSFISLLGTILLDSTATFDSLR 145 (296)
Q Consensus 66 ~~y~~~~~l~~yl~~~lg~s~~~a~~i~~~~~~~~~~~~l~~G~laDr~iGR~~~i~i~~~l~~ig~~~la~~~~~p~~~ 145 (296)
.++... ...+.+.+++|.|..+.+++.+.+.++..++.++.|+++|| +|||+++..+..+..++.++.+++.
T Consensus 24 ~~~~~~-~~lp~i~~~~~~s~~~~g~~~s~~~~~~~l~~~~~g~l~dr-~G~r~~l~~~~~l~~~~~~~~~~a~------ 95 (393)
T PRK09705 24 LLTSVG-PLLPQLRQASGMSFSVAALLTALPVVTMGGLALAGSWLHQH-VSERRSVAISLLLIAVGALMRELYP------ 95 (393)
T ss_pred hhhccc-hhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHH-hCchHHHHHHHHHHHHHHHHHHHCc------
Confidence 444444 44446778999999999999999999999999999999999 7999999999999999998887653
Q ss_pred CCccCCCCcCcCCCCchhhHHHHHHHHHHHHhhchhhhhhhhhhhccCCCccchhhHHHHHHHHHHHHHHHHHHHHHhhh
Q 045564 146 PQRCDIGLSLCKAPSKVQFAVLYSGIALACLGLGGLRFTLATMGANQFEIPQHQGIFFNWFFILTYASTVISSAAFVYIE 225 (296)
Q Consensus 146 ~~~c~~~~~~~~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~~~ad~f~~~~~r~~~f~~~y~~~~iG~~i~p~v~~~l~ 225 (296)
+...++++|++.|+|.+...+..+..+.+.+| + +|+...+.+..+.++|..+++.+++++.
T Consensus 96 -----------------~~~~ll~~r~l~Gig~~~~~~~~~~~~~~~~~-~-~~~~~~g~~~~~~~~g~~~g~~~~~~l~ 156 (393)
T PRK09705 96 -----------------QSALLLSSALLGGVGIGIIQAVMPSVIKRRFQ-Q-RTPLVMGLWSAALMGGGGLGAAITPWLV 156 (393)
T ss_pred -----------------chHHHHHHHHHHHhHHHHHhhhhhHHHHHHcc-c-cchhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 24567889999999999999999999999997 3 5788999988889999999999999988
Q ss_pred ccc-cchhhHHHHHHHHHHH
Q 045564 226 DNL-SWRLGSGLNIAANLAG 244 (296)
Q Consensus 226 ~~~-gw~~~F~i~~~~~~~~ 244 (296)
+.. +||+.+.+.++..++.
T Consensus 157 ~~~~~w~~~~~~~~~~~~~~ 176 (393)
T PRK09705 157 QHSETWYQTLAWWALPAVVA 176 (393)
T ss_pred HhcCCHHHHHHHHHHHHHHH
Confidence 775 8998877655543333
No 44
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=99.63 E-value=3.9e-14 Score=133.79 Aligned_cols=148 Identities=10% Similarity=0.089 Sum_probs=125.6
Q ss_pred HHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhcchHHHHHHHHHHHHHHHHHHHhhccccCCCCCccCCCCc
Q 045564 75 MVYMIQEFHITSINSALISNIVNGFVNLFPVLGAIIADSFLGSFQVIWISSFISLLGTILLDSTATFDSLRPQRCDIGLS 154 (296)
Q Consensus 75 ~~yl~~~lg~s~~~a~~i~~~~~~~~~~~~l~~G~laDr~iGR~~~i~i~~~l~~ig~~~la~~~~~p~~~~~~c~~~~~ 154 (296)
.+.+.+++|.+..+.++..+++..+..++.++.|+++|| +||||.+.++.++..++.+++....
T Consensus 26 lp~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr-~g~r~~l~~~~~~~~i~~~~~~~~~--------------- 89 (392)
T PRK10473 26 LPRIAADLNASEAQLHIAFSVYLAGMAAAMLFAGKIADR-SGRKPVAIPGAALFIIASLLCSLAE--------------- 89 (392)
T ss_pred HHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhHhHHHHH-hCChHHHHHHHHHHHHHHHHHHHhC---------------
Confidence 345567899999999999999999999999999999999 7999999999988888777655432
Q ss_pred CcCCCCchhhHHHHHHHHHHHHhhchhhhhhhhhhhccCCCccchhhHHHHHHHHHHHHHHHHHHHHHhhhccccchhhH
Q 045564 155 LCKAPSKVQFAVLYSGIALACLGLGGLRFTLATMGANQFEIPQHQGIFFNWFFILTYASTVISSAAFVYIEDNLSWRLGS 234 (296)
Q Consensus 155 ~~~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~~~ad~f~~~~~r~~~f~~~y~~~~iG~~i~p~v~~~l~~~~gw~~~F 234 (296)
+...++++|++.|++.+...+...+++.|.+|+ ++|++..++++...++|..++|.+++++.+..||++.|
T Consensus 90 --------~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~-~~r~~~~~~~~~~~~i~~~~~~~i~~~l~~~~g~~~~~ 160 (392)
T PRK10473 90 --------TSSLFLAGRFLQGIGAGCCYVVAFAILRDTLDD-RRRAKVLSLLNGITCIIPVLAPVLGHLIMLKFPWQSLF 160 (392)
T ss_pred --------cHHHHHHHHHHHHhhhhHHHHHHHHHHHHHcCH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcChHHHH
Confidence 245677889999999998888899999999984 47899999999999999999999999988888999999
Q ss_pred HHHHHHHHHHHHH
Q 045564 235 GLNIAANLAGVVI 247 (296)
Q Consensus 235 ~i~~~~~~~~~~~ 247 (296)
++.+++.++..++
T Consensus 161 ~~~~~~~~i~~~~ 173 (392)
T PRK10473 161 YTMAAMGILVLLL 173 (392)
T ss_pred HHHHHHHHHHHHH
Confidence 9887765554443
No 45
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=99.61 E-value=4.9e-14 Score=131.05 Aligned_cols=146 Identities=8% Similarity=0.024 Sum_probs=116.2
Q ss_pred hHHHhHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhcchHHHHHHHHHHHHHHHHHHHhhccccCCC
Q 045564 66 LGEGWVANLMVYMIQEFHITSINSALISNIVNGFVNLFPVLGAIIADSFLGSFQVIWISSFISLLGTILLDSTATFDSLR 145 (296)
Q Consensus 66 ~~y~~~~~l~~yl~~~lg~s~~~a~~i~~~~~~~~~~~~l~~G~laDr~iGR~~~i~i~~~l~~ig~~~la~~~~~p~~~ 145 (296)
..+.....++.++.+++|++..+.+++.+++.++..++.+++|+++|| +|||+++.++.++..++.+++.+..
T Consensus 16 ~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr-~g~r~~~~~~~~~~~i~~~~~~~~~------ 88 (366)
T TIGR00886 16 VWFAFSPLAVQMIKDDLGLSTAQLGNLVAVPVLAGAVLRIILGFLVDK-FGPRYTTTLSLLLLAIPCLWAGLAV------ 88 (366)
T ss_pred HHHHhHHhhhHHHHHHhCCCHHHhhHhhHHHHHHHHHHHHHHHHHHHH-hCchHHHHHHHHHHHHHHHHHHHHh------
Confidence 444445556667999999999999999999999999999999999999 7999999999999988877765442
Q ss_pred CCccCCCCcCcCCCCchhhHHHHHHHHHHHHhhchhhhhhhhhhhccCCCccchhhHHHHHHHHHHHHHHHHHHHHHhhh
Q 045564 146 PQRCDIGLSLCKAPSKVQFAVLYSGIALACLGLGGLRFTLATMGANQFEIPQHQGIFFNWFFILTYASTVISSAAFVYIE 225 (296)
Q Consensus 146 ~~~c~~~~~~~~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~~~ad~f~~~~~r~~~f~~~y~~~~iG~~i~p~v~~~l~ 225 (296)
.+...++++|++.|++.+. .+...++++|.+|+ ++|+...+++....++|..+++.+.+.+.
T Consensus 89 ----------------~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~-~~r~~~~~~~~~~~~~g~~~~~~i~~~l~ 150 (366)
T TIGR00886 89 ----------------QSYSVLLLLRLFIGIAGGS-FASCMPWISFFFPK-KIQGTALGLAAGWGNMGGGVAQFVMPPII 150 (366)
T ss_pred ----------------hhHHHHHHHHHHHHHhchh-hHhHHHHHHHhcCH-hhhhHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 0346678889999998664 45567889999984 46888998888777788777777666554
Q ss_pred c----------cccchhhHHH
Q 045564 226 D----------NLSWRLGSGL 236 (296)
Q Consensus 226 ~----------~~gw~~~F~i 236 (296)
. ..+||+.|++
T Consensus 151 ~~~~~~~~~~~~~~w~~~~~~ 171 (366)
T TIGR00886 151 GSLIFGAGLPAHLAWGWAFVI 171 (366)
T ss_pred HHHHhcccccccccccchhHH
Confidence 3 2489999944
No 46
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.61 E-value=6.2e-14 Score=137.07 Aligned_cols=164 Identities=13% Similarity=0.108 Sum_probs=118.4
Q ss_pred hHHHhHHHHHHHHHHHhCCChhH-HHH-----HHHHHHHHHHHHHHHHHHHhhhhcchHHHHHHHHHHHHHHHHHHHhhc
Q 045564 66 LGEGWVANLMVYMIQEFHITSIN-SAL-----ISNIVNGFVNLFPVLGAIIADSFLGSFQVIWISSFISLLGTILLDSTA 139 (296)
Q Consensus 66 ~~y~~~~~l~~yl~~~lg~s~~~-a~~-----i~~~~~~~~~~~~l~~G~laDr~iGR~~~i~i~~~l~~ig~~~la~~~ 139 (296)
..+++..+...++.++++.+... ..+ +.++..++..++++++|+++|| +|||+++.++.+++.++.++++++.
T Consensus 30 ~d~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr-~Grr~~l~~~~~l~~i~~~~~a~~~ 108 (490)
T PRK10642 30 FDFGVYGFVAYALGKVFFPGADPSVQMIAALATFSVPFLIRPLGGLFFGMLGDK-YGRQKILAITIVIMSISTFCIGLIP 108 (490)
T ss_pred HHHHHHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cccHHHHHHHHHHHHHHHHHHHhcc
Confidence 33445556666888888643322 111 2466677888999999999999 7999999999999999988877653
Q ss_pred cccCCCCCccCCCCcCcCCCCchhhHHHHHHHHHHHHhhchhhhhhhhhhhccCCCccchhhHHHHHHHHHHHHHHHHHH
Q 045564 140 TFDSLRPQRCDIGLSLCKAPSKVQFAVLYSGIALACLGLGGLRFTLATMGANQFEIPQHQGIFFNWFFILTYASTVISSA 219 (296)
Q Consensus 140 ~~p~~~~~~c~~~~~~~~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~~~ad~f~~~~~r~~~f~~~y~~~~iG~~i~p~ 219 (296)
.+.. -.......+++.|++.|+|.|+..+...++++|.+|++ +|+...++...+.++|..+|+.
T Consensus 109 ---~~~~------------~g~~a~~~l~~~R~l~G~g~g~~~~~~~~~~~e~~p~~-~Rg~~~~~~~~~~~~G~~lg~~ 172 (490)
T PRK10642 109 ---SYAT------------IGIWAPILLLLCKMAQGFSVGGEYTGASIFVAEYSPDR-KRGFMGSWLDFGSIAGFVLGAG 172 (490)
T ss_pred ---cHHH------------HHHHHHHHHHHHHHHHHhHhHhhHHHHHHHHHHhCCCC-CCcHHHHHHHHHHHHHHHHHHH
Confidence 2100 00001124788999999999999999999999999954 6888888888777788877776
Q ss_pred HHHhhh--------ccccchhhHHHHHHHHHHHHH
Q 045564 220 AFVYIE--------DNLSWRLGSGLNIAANLAGVV 246 (296)
Q Consensus 220 v~~~l~--------~~~gw~~~F~i~~~~~~~~~~ 246 (296)
+...+. ..+|||+.|++.++..+++++
T Consensus 173 ~~~~~~~~~~~~~~~~~gWR~~f~i~~~~~l~~~~ 207 (490)
T PRK10642 173 VVVLISTIVGEANFLDWGWRIPFFIALPLGIIGLY 207 (490)
T ss_pred HHHHHHHhcCHHHhcCccHHHHHHHHHHHHHHHHH
Confidence 554432 257999999997765544443
No 47
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.61 E-value=5.3e-14 Score=128.46 Aligned_cols=157 Identities=18% Similarity=0.183 Sum_probs=133.8
Q ss_pred hHHHhHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhcchHHHHHHHHHHHHHHHHHHHhhccccCCC
Q 045564 66 LGEGWVANLMVYMIQEFHITSINSALISNIVNGFVNLFPVLGAIIADSFLGSFQVIWISSFISLLGTILLDSTATFDSLR 145 (296)
Q Consensus 66 ~~y~~~~~l~~yl~~~lg~s~~~a~~i~~~~~~~~~~~~l~~G~laDr~iGR~~~i~i~~~l~~ig~~~la~~~~~p~~~ 145 (296)
..+.....++.|. +++|.+..+.+++.+....+..++.++.|+++|| +||||.+.++.++..++.+.+.+..
T Consensus 14 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~d~-~g~r~~~~~~~~~~~~~~~~~~~~~------ 85 (352)
T cd06174 14 DRGLLSPALPLLA-EDLGLSASQAGLIVSAFSLGYALGSLLAGYLSDR-FGRRRVLLLGLLLFALGSLLLAFAS------ 85 (352)
T ss_pred hhhhhHhhHHHHH-HHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHH-hCCchhhHHHHHHHHHHHHHHHHhc------
Confidence 4444445555555 5679999999999999999999999999999999 7999999999999998887766542
Q ss_pred CCccCCCCcCcCCCCchhhHHHHHHHHHHHHhhchhhhhhhhhhhccCCCccchhhHHHHHHHHHHHHHHHHHHHHHhhh
Q 045564 146 PQRCDIGLSLCKAPSKVQFAVLYSGIALACLGLGGLRFTLATMGANQFEIPQHQGIFFNWFFILTYASTVISSAAFVYIE 225 (296)
Q Consensus 146 ~~~c~~~~~~~~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~~~ad~f~~~~~r~~~f~~~y~~~~iG~~i~p~v~~~l~ 225 (296)
+...+++++++.|++.+...+...++..|.+|+ ++|++.+++.+...++|..++|.+.+++.
T Consensus 86 -----------------~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 147 (352)
T cd06174 86 -----------------SLWLLLVGRFLLGLGGGALYPAAAALIAEWFPP-KERGRALGLFSAGFGLGALLGPLLGGLLA 147 (352)
T ss_pred -----------------cHHHHHHHHHHHHcccccccHhHHHHHHHhCCc-cchhhhhhHHHHHHHHHHHHHHHHHHHHH
Confidence 346788899999999999999999999999995 47899999999999999999999999999
Q ss_pred ccccchhhHHHHHHHHHHHHHHH
Q 045564 226 DNLSWRLGSGLNIAANLAGVVIF 248 (296)
Q Consensus 226 ~~~gw~~~F~i~~~~~~~~~~~~ 248 (296)
+..+|++.|++.++..++..+..
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~ 170 (352)
T cd06174 148 ESLGWRWLFLILAILGLLLALLL 170 (352)
T ss_pred HHhhHHHHHHHHHHHHHHHHHHH
Confidence 98899999999887666655443
No 48
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=99.61 E-value=3.2e-14 Score=133.11 Aligned_cols=151 Identities=11% Similarity=0.076 Sum_probs=128.5
Q ss_pred HHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhcchHHHHHHHHHHHHHHHHHHHhhccccCCCCCccCC
Q 045564 72 ANLMVYMIQEFHITSINSALISNIVNGFVNLFPVLGAIIADSFLGSFQVIWISSFISLLGTILLDSTATFDSLRPQRCDI 151 (296)
Q Consensus 72 ~~l~~yl~~~lg~s~~~a~~i~~~~~~~~~~~~l~~G~laDr~iGR~~~i~i~~~l~~ig~~~la~~~~~p~~~~~~c~~ 151 (296)
..++.+. +++|++..+.+.+.+++.++..++.+++|+++|| +|||+++.++.++..++.+.+....
T Consensus 12 p~~~~~~-~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~-~g~~~~~~~~~~~~~i~~~~~~~~~------------ 77 (377)
T PRK11102 12 PALPVIA-ADFGVSAGSVQMTLSAYILGFAIGQLFYGPMADS-FGRKPVILGGTLVFALAAVACALAQ------------ 77 (377)
T ss_pred ccHHHHH-HHhCCCHHHHHHHHHHHHHHHHHHHHhhchHHhh-cCChHHHHHHHHHHHHHHHHHHHHc------------
Confidence 3444444 6799999999999999999999999999999999 7999999999998888877765432
Q ss_pred CCcCcCCCCchhhHHHHHHHHHHHHhhchhhhhhhhhhhccCCCccchhhHHHHHHHHHHHHHHHHHHHHHhhhccccch
Q 045564 152 GLSLCKAPSKVQFAVLYSGIALACLGLGGLRFTLATMGANQFEIPQHQGIFFNWFFILTYASTVISSAAFVYIEDNLSWR 231 (296)
Q Consensus 152 ~~~~~~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~~~ad~f~~~~~r~~~f~~~y~~~~iG~~i~p~v~~~l~~~~gw~ 231 (296)
+...+++.+++.|++.+...+...+++.|.+|+ ++|++.+++.+...++|..++|.+++++.+..||+
T Consensus 78 -----------~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~ 145 (377)
T PRK11102 78 -----------TIDQLIYMRFLHGLAAAAASVVINALMRDMFPK-EEFSRMMSFVTLVMTIAPLLAPIIGGWLLVWFSWH 145 (377)
T ss_pred -----------cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChH
Confidence 245678889999999999999999999999984 47899999999999999999999999999888999
Q ss_pred hhHHHHHHHHHHHHHHH
Q 045564 232 LGSGLNIAANLAGVVIF 248 (296)
Q Consensus 232 ~~F~i~~~~~~~~~~~~ 248 (296)
+.|++.++..++..+..
T Consensus 146 ~~~~~~~~~~~~~~~~~ 162 (377)
T PRK11102 146 AIFWVLALAAILAAALV 162 (377)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 99998877665554443
No 49
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.60 E-value=3.8e-14 Score=137.45 Aligned_cols=147 Identities=18% Similarity=0.115 Sum_probs=120.7
Q ss_pred HHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhcchHHHHHHHHHHHHHHHHHHHhhccccCCCCCccCCCCcC
Q 045564 76 VYMIQEFHITSINSALISNIVNGFVNLFPVLGAIIADSFLGSFQVIWISSFISLLGTILLDSTATFDSLRPQRCDIGLSL 155 (296)
Q Consensus 76 ~yl~~~lg~s~~~a~~i~~~~~~~~~~~~l~~G~laDr~iGR~~~i~i~~~l~~ig~~~la~~~~~p~~~~~~c~~~~~~ 155 (296)
..+.+++|.+..+.+++.+.+.....++.+++|+++|| +|||++++.+.++..++.++++++.
T Consensus 43 ~~i~~~~g~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr-~g~r~~l~~~~~~~~~~~~~~~~~~---------------- 105 (455)
T TIGR00892 43 KELQQIFQATYSETAWISSIMLAVLYAGGPISSILVNR-FGCRPVVIAGGLLASLGMILASFSS---------------- 105 (455)
T ss_pred HHHHHHhCcchhHHHHHHHHHHHHHHHhhHHHHHHHHH-cCchHHHHhhHHHHHHHHHHHHHhh----------------
Confidence 45568999999999999999999999999999999999 7999999999988888777665542
Q ss_pred cCCCCchhhHHHH-HHHHHHHHhhchhhhhhhhhhhccCCCccchhhHHHHHHHHHHHHHHHHHHHHHhhhccccchhhH
Q 045564 156 CKAPSKVQFAVLY-SGIALACLGLGGLRFTLATMGANQFEIPQHQGIFFNWFFILTYASTVISSAAFVYIEDNLSWRLGS 234 (296)
Q Consensus 156 ~~~~~~~~~~~l~-~~~~l~gig~g~~~~~~~~~~ad~f~~~~~r~~~f~~~y~~~~iG~~i~p~v~~~l~~~~gw~~~F 234 (296)
+...++ ..|++.|++.+...+...+.+.+.++ + +|++..++.+.+.++|..++|.+.+++.+.+|||+.|
T Consensus 106 -------~~~~l~~~~~~l~G~~~~~~~~~~~~~~~~~~~-~-~r~~a~g~~~~~~~~g~~~~~~l~~~l~~~~gwr~~f 176 (455)
T TIGR00892 106 -------NVIELYLTAGFITGLGLAFNFQPSLTMLGKYFY-R-RRPLANGLAMAGSPVFLSTLAPLNQYLFESFGWRGSF 176 (455)
T ss_pred -------hHHHHHHHHHHHHHhcchhhhhHHHHHHHHHHH-h-hHHHHHHHHHhcccHHHHHHHHHHHHHHHHhChHHHH
Confidence 223444 34678899888766666777888886 4 6899999999999999999999999999989999999
Q ss_pred HHHHHHHHHHHHHH
Q 045564 235 GLNIAANLAGVVIF 248 (296)
Q Consensus 235 ~i~~~~~~~~~~~~ 248 (296)
++.+++.++..+..
T Consensus 177 ~~~~~~~~~~~v~~ 190 (455)
T TIGR00892 177 LILGGLLLHCCVCG 190 (455)
T ss_pred HHHHHHHHHHHHHH
Confidence 99888766555443
No 50
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.60 E-value=1.1e-13 Score=130.68 Aligned_cols=155 Identities=14% Similarity=0.022 Sum_probs=123.5
Q ss_pred hHHHhHHHHHHHHHHHhCCChhH-----HHHHHHHHHHHHHHHHHHHHHHhhhhcchHHHHHHHHHHHHHHHHHHHhhcc
Q 045564 66 LGEGWVANLMVYMIQEFHITSIN-----SALISNIVNGFVNLFPVLGAIIADSFLGSFQVIWISSFISLLGTILLDSTAT 140 (296)
Q Consensus 66 ~~y~~~~~l~~yl~~~lg~s~~~-----a~~i~~~~~~~~~~~~l~~G~laDr~iGR~~~i~i~~~l~~ig~~~la~~~~ 140 (296)
++......++.|++ ++|.+..+ .+.+.+++.+...++.++.|+++|| +|||+++.++.++..++.+++....
T Consensus 29 ~~~~~~~~l~~~~~-~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr-~g~r~~~~~~~~~~~~~~~~~~~~~- 105 (408)
T PRK09874 29 AFSLVMPFLPLYVE-QLGVTGHSALNMWSGLVFSITFLFSAIASPFWGGLADR-KGRKIMLLRSALGMGIVMVLMGLAQ- 105 (408)
T ss_pred HHHHhhhhHHHHHH-HhCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhh-hCcHHHHHHHHHHHHHHHHHHHHHh-
Confidence 44555666777774 58888654 3678888999999999999999999 7999999999888888776654432
Q ss_pred ccCCCCCccCCCCcCcCCCCchhhHHHHHHHHHHHHhhchhhhhhhhhhhccCCCccchhhHHHHHHHHHHHHHHHHHHH
Q 045564 141 FDSLRPQRCDIGLSLCKAPSKVQFAVLYSGIALACLGLGGLRFTLATMGANQFEIPQHQGIFFNWFFILTYASTVISSAA 220 (296)
Q Consensus 141 ~p~~~~~~c~~~~~~~~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~~~ad~f~~~~~r~~~f~~~y~~~~iG~~i~p~v 220 (296)
+...+++.|++.+++.+ ..+...+.+.|.+|+ ++|+...++++.+.++|..++|.+
T Consensus 106 ----------------------~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~ 161 (408)
T PRK09874 106 ----------------------NIWQFLILRALLGLLGG-FVPNANALIATQVPR-NKSGWALGTLSTGGVSGALLGPLA 161 (408)
T ss_pred ----------------------hHHHHHHHHHHHHHhhh-hHHhHHHHHHHhcCH-hhhhHHHHHHHHHHHHHHHHHHHH
Confidence 34677888999998755 456777788899884 468889999889999999999999
Q ss_pred HHhhhccccchhhHHHHHHHHHHHHHH
Q 045564 221 FVYIEDNLSWRLGSGLNIAANLAGVVI 247 (296)
Q Consensus 221 ~~~l~~~~gw~~~F~i~~~~~~~~~~~ 247 (296)
.+++.+..+|++.|++.++..++..+.
T Consensus 162 ~~~l~~~~~~~~~~~~~~~~~~~~~~~ 188 (408)
T PRK09874 162 GGLLADSYGLRPVFFITASVLFLCFLV 188 (408)
T ss_pred HHHHHHHhCHHHHHHHHHHHHHHHHHH
Confidence 999988889999999988766555443
No 51
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.60 E-value=1.1e-13 Score=135.09 Aligned_cols=149 Identities=7% Similarity=-0.061 Sum_probs=115.0
Q ss_pred HHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhcchHHHHHHHHHHHHHHHHHHHhhccccCCCCCccCCC
Q 045564 73 NLMVYMIQEFHITSINSALISNIVNGFVNLFPVLGAIIADSFLGSFQVIWISSFISLLGTILLDSTATFDSLRPQRCDIG 152 (296)
Q Consensus 73 ~l~~yl~~~lg~s~~~a~~i~~~~~~~~~~~~l~~G~laDr~iGR~~~i~i~~~l~~ig~~~la~~~~~p~~~~~~c~~~ 152 (296)
....++.+++|++..+.+++.+.+.++..++.+++|+++|| +|||+++.++.++..++.++++++.
T Consensus 57 ~~~~~l~~~~gls~~~~g~~~~~~~~~~~~~~~~~G~l~dr-~G~r~~~~~~~~~~~~~~~~~~~~~------------- 122 (476)
T PLN00028 57 PLLPIIRDNLNLTKSDIGNAGIASVSGSIFSRLAMGPVCDL-YGPRYGSAFLLMLTAPAVFCMSLVS------------- 122 (476)
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCChHHHHHHHHHHHHHHHHHHHhc-------------
Confidence 44457788999999999999999999999999999999999 7999999999888888776655442
Q ss_pred CcCcCCCCchhhHHHHHHHHHHHHhhchhhhhhhhhhhccCCCccchhhHHHHHHHHHHHHHHHHHHHHHhhh----c--
Q 045564 153 LSLCKAPSKVQFAVLYSGIALACLGLGGLRFTLATMGANQFEIPQHQGIFFNWFFILTYASTVISSAAFVYIE----D-- 226 (296)
Q Consensus 153 ~~~~~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~~~ad~f~~~~~r~~~f~~~y~~~~iG~~i~p~v~~~l~----~-- 226 (296)
+...+++.|++.|++.+... ....+++|.+|++ +|+.+.++.+...++|+.+++.+.+.+. +
T Consensus 123 ----------s~~~l~~~r~l~G~~~~~~~-~~~~~i~~~~~~~-~rg~a~g~~~~~~~~g~~~~~~~~~~i~~~~~~~~ 190 (476)
T PLN00028 123 ----------SATGFIAVRFFIGFSLATFV-SCQYWMSTMFNGK-IVGTANGIAAGWGNLGGGVTQLLMPLVFPLIKDAG 190 (476)
T ss_pred ----------CHHHHHHHHHHHHHHHHhhH-HHHHHHHHhcChh-heeHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 23567778999998887654 3456789999844 7899999887777788777766555442 2
Q ss_pred ---cccchhhHHHHHHHHHHHHHH
Q 045564 227 ---NLSWRLGSGLNIAANLAGVVI 247 (296)
Q Consensus 227 ---~~gw~~~F~i~~~~~~~~~~~ 247 (296)
..|||+.|++.+++.++..++
T Consensus 191 ~~~~~gWr~~f~i~g~l~l~~~l~ 214 (476)
T PLN00028 191 APSFTAWRIAFFVPGLLHIIMGIL 214 (476)
T ss_pred CcchhhhHHHHHHHHHHHHHHHHH
Confidence 248999999988765544433
No 52
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=99.59 E-value=9.6e-14 Score=136.07 Aligned_cols=155 Identities=15% Similarity=0.122 Sum_probs=122.8
Q ss_pred CCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhcchHHHHHHHHHHHHHHHHHHHhhccccCCCCCccCCCCcCcCCCCch
Q 045564 83 HITSINSALISNIVNGFVNLFPVLGAIIADSFLGSFQVIWISSFISLLGTILLDSTATFDSLRPQRCDIGLSLCKAPSKV 162 (296)
Q Consensus 83 g~s~~~a~~i~~~~~~~~~~~~l~~G~laDr~iGR~~~i~i~~~l~~ig~~~la~~~~~p~~~~~~c~~~~~~~~~~~~~ 162 (296)
+.+..+.+++.+.+.++..++.++.|+++|| +|||+++.++.++..++.++.+++. .. ....
T Consensus 52 ~~~~~~~~~~~~~~~ig~~ig~~~~g~l~d~-~Grr~~~~~~~~~~~v~~~~~~~~~---~~--------------~~~~ 113 (502)
T TIGR00887 52 PLPSSVSAAVNGSASIGTLAGQLFFGWLADK-LGRKRVYGMELIIMIIATVASGLSP---GS--------------SPKS 113 (502)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHHh-hccHHHHHHHHHHHHHHHHHHHHcc---Cc--------------ccch
Confidence 3455677889999999999999999999999 7999999999999998887666542 10 0001
Q ss_pred hhHHHHHHHHHHHHhhchhhhhhhhhhhccCCCccchhhHHHHHHHHHHHHHHHHHHHHHhhhc----------------
Q 045564 163 QFAVLYSGIALACLGLGGLRFTLATMGANQFEIPQHQGIFFNWFFILTYASTVISSAAFVYIED---------------- 226 (296)
Q Consensus 163 ~~~~l~~~~~l~gig~g~~~~~~~~~~ad~f~~~~~r~~~f~~~y~~~~iG~~i~p~v~~~l~~---------------- 226 (296)
+...++++|++.|++.|+..+..+.+++|.+|++ .|+++.+++++...+|..+++.+..++..
T Consensus 114 ~~~~~~~~r~l~G~~~g~~~~~~~~~~~e~~p~~-~Rg~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (502)
T TIGR00887 114 VMATLCFWRFWLGVGIGGDYPLSAIITSEFATKK-WRGAMMAAVFAMQGFGILAGAIVALIVLAGFKHSLEAAADEASCT 192 (502)
T ss_pred HHHHHHHHHHHHHHHHhhhhHHHHHHHHHhcChh-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccccccc
Confidence 2467899999999999999999999999999954 78999999999999999998887765431
Q ss_pred -------cccchhhHHHHHHHHHHHHHH--HHhCCCchh
Q 045564 227 -------NLSWRLGSGLNIAANLAGVVI--FLSGKHFYF 256 (296)
Q Consensus 227 -------~~gw~~~F~i~~~~~~~~~~~--~~~~~~~~~ 256 (296)
.++||+.|.+.++..++.++. +++++|||.
T Consensus 193 ~~~~~~~~~~WR~~~~~~~ip~~i~~~~~~~lpESpr~l 231 (502)
T TIGR00887 193 GSCVPAVDYMWRILIGFGAVPALLALYFRLTIPETPRYT 231 (502)
T ss_pred ccccchhcccHHHHHHHHHHHHHHHHHHHHhCCCCHHHH
Confidence 247999998877755444433 467888884
No 53
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.58 E-value=1.5e-14 Score=133.84 Aligned_cols=151 Identities=11% Similarity=0.074 Sum_probs=128.2
Q ss_pred HHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhcchHHHHHHHHHHHHHHHHHHHhhccccCCCCCccCC
Q 045564 72 ANLMVYMIQEFHITSINSALISNIVNGFVNLFPVLGAIIADSFLGSFQVIWISSFISLLGTILLDSTATFDSLRPQRCDI 151 (296)
Q Consensus 72 ~~l~~yl~~~lg~s~~~a~~i~~~~~~~~~~~~l~~G~laDr~iGR~~~i~i~~~l~~ig~~~la~~~~~p~~~~~~c~~ 151 (296)
....+++.+++|++..+.+++.+++.++..++.+++|+++|| +|||+++.++.++..++.+++.++.
T Consensus 15 ~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr-~g~r~~~~~~~~~~~~~~~~~~~~~------------ 81 (379)
T TIGR00881 15 ALAMPYLVEEIGLSKTDLGLLLSSFSIAYGISKFVMGSVSDR-SNPRVFLPIGLILCAIVNLFFGFST------------ 81 (379)
T ss_pred hhhhHHHHHHhCCCHhHHHHHHHHHHHHHHhhhhhhhHHHHh-hCCeehhHHHHHHHHHHHHHHHHhh------------
Confidence 344457888999999999999999999999999999999999 7999999999999988887766542
Q ss_pred CCcCcCCCCchhhHHHHHHHHHHHHhhchhhhhhhhhhhccCCCccchhhHHHHHHHHHHHHHHHHH-HHHHhhhccccc
Q 045564 152 GLSLCKAPSKVQFAVLYSGIALACLGLGGLRFTLATMGANQFEIPQHQGIFFNWFFILTYASTVISS-AAFVYIEDNLSW 230 (296)
Q Consensus 152 ~~~~~~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~~~ad~f~~~~~r~~~f~~~y~~~~iG~~i~p-~v~~~l~~~~gw 230 (296)
+...+++.|++.|++.+...+...+++.|.+|++ +|+..+++...+.++|..++| .+.+.+.+..+|
T Consensus 82 -----------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 149 (379)
T TIGR00881 82 -----------SLWVMAALWALNGIFQGMGWPPCGRTVTKWFSRS-ERGTWVSFWNCSHNVGGGLLPPLVLFGIAELYSW 149 (379)
T ss_pred -----------hHHHHHHHHHHHHhhccccCCchHHHHHHhcCHh-hheeeEeehhccchhHHHHHHHHHHHHHHhcCCc
Confidence 3467888999999999999999999999999844 688888888899999999999 567777777899
Q ss_pred hhhHHHHHHHHHHHHHH
Q 045564 231 RLGSGLNIAANLAGVVI 247 (296)
Q Consensus 231 ~~~F~i~~~~~~~~~~~ 247 (296)
++.|++.+++.++..++
T Consensus 150 ~~~~~~~~~~~~~~~~~ 166 (379)
T TIGR00881 150 HWVFIVPGIIAIIVSLI 166 (379)
T ss_pred hhHHHHHHHHHHHHHHH
Confidence 99999887755544433
No 54
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=99.58 E-value=1.1e-14 Score=141.26 Aligned_cols=150 Identities=11% Similarity=-0.049 Sum_probs=122.4
Q ss_pred HHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhcchHHHHHHHHHHHHHHHHHHHhhccccCCCCCccCCCC
Q 045564 74 LMVYMIQEFHITSINSALISNIVNGFVNLFPVLGAIIADSFLGSFQVIWISSFISLLGTILLDSTATFDSLRPQRCDIGL 153 (296)
Q Consensus 74 l~~yl~~~lg~s~~~a~~i~~~~~~~~~~~~l~~G~laDr~iGR~~~i~i~~~l~~ig~~~la~~~~~p~~~~~~c~~~~ 153 (296)
....+.+++|++..+.+++.+.+..+..++.+++|+++|| +|||+++.++.++..++.+.++... . ..
T Consensus 51 ~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr-~g~r~~l~~~~~~~~~~~~~~~~~~-~-~~--------- 118 (467)
T PRK09556 51 AQNDMISTYGLSTTELGMIGLGFSITYGVGKTLVGYYADG-KNTKQFLPFLLILSAICMLGFGASL-G-SG--------- 118 (467)
T ss_pred hhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhhhHhhc-cCccchHHHHHHHHHHHHHHHHHHH-h-cc---------
Confidence 3456778999999999999999999999999999999999 7999999998888877666555421 0 00
Q ss_pred cCcCCCCchhhHHHHHHHHHHHHhhchhhhhhhhhhhccCCCccchhhHHHHHHHHHHHHHHHHHHHHHhhhccc---cc
Q 045564 154 SLCKAPSKVQFAVLYSGIALACLGLGGLRFTLATMGANQFEIPQHQGIFFNWFFILTYASTVISSAAFVYIEDNL---SW 230 (296)
Q Consensus 154 ~~~~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~~~ad~f~~~~~r~~~f~~~y~~~~iG~~i~p~v~~~l~~~~---gw 230 (296)
..+...+++.|++.|++.+...+....+++|.+|++ +|+..++++..+.++|+.+++.+..++.+.. +|
T Consensus 119 -------~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~-~rg~a~gi~~~~~~lG~~l~~~i~~~~~~~~~~~~~ 190 (467)
T PRK09556 119 -------SVSLGLMIALWALSGFFQSTGGPCSYSTITRWTPRR-KRGRFLGFWNISHNLGGAGAGGVALWGANYFFDGHV 190 (467)
T ss_pred -------cchHHHHHHHHHHHHHHHhccchHHHHHHHHHcCcc-ceeeeEEeeecccchhhhHHHHHHHHHHHhhccCcc
Confidence 024677888999999999998999999999999954 6899999988899999999998888776543 68
Q ss_pred hhhHHHHHHHHHH
Q 045564 231 RLGSGLNIAANLA 243 (296)
Q Consensus 231 ~~~F~i~~~~~~~ 243 (296)
+..|.+.++..++
T Consensus 191 ~~~f~~~g~~~~~ 203 (467)
T PRK09556 191 IGMFIFPSIIALI 203 (467)
T ss_pred hhHHHHHHHHHHH
Confidence 8888886665444
No 55
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.57 E-value=2.2e-13 Score=128.56 Aligned_cols=154 Identities=12% Similarity=0.067 Sum_probs=124.7
Q ss_pred CchhHHHHHHHHH--H-hHHHhHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhcchHHHHHHHHHHH
Q 045564 52 GRTALLSRTVTCL--T-LGEGWVANLMVYMIQEFHITSINSALISNIVNGFVNLFPVLGAIIADSFLGSFQVIWISSFIS 128 (296)
Q Consensus 52 ~~~~~~~l~~~~~--~-~~y~~~~~l~~yl~~~lg~s~~~a~~i~~~~~~~~~~~~l~~G~laDr~iGR~~~i~i~~~l~ 128 (296)
+.|.++.+++..+ . ........++.|+. ++|.|..+++++.+.+.++..++.++.|+++|| +||||++.++.++.
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~-~~~~s~~~~G~~~s~~~l~~~~~~~~~g~l~dr-~g~k~~~~~~~~~~ 81 (381)
T PRK03633 4 YTRPVLLLLCGLLLLTLAIAVLNTLVPLWLA-QEHLPTWQVGVVSSSYFTGNLVGTLLAGYVIKR-IGFNRSYYLASLIF 81 (381)
T ss_pred HHHHHHHHHHHHHHHHHhhhhHHHHHHHHHH-HcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHH-HHHHHHHHHHHHHH
Confidence 3455666666665 3 44445566666665 689999999999999999999999999999999 79999999999999
Q ss_pred HHHHHHHHhhccccCCCCCccCCCCcCcCCCCchhhHHHHHHHHHHHHhhchhhhhhhhhhhccCCCccchhhHHHHHHH
Q 045564 129 LLGTILLDSTATFDSLRPQRCDIGLSLCKAPSKVQFAVLYSGIALACLGLGGLRFTLATMGANQFEIPQHQGIFFNWFFI 208 (296)
Q Consensus 129 ~ig~~~la~~~~~p~~~~~~c~~~~~~~~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~~~ad~f~~~~~r~~~f~~~y~ 208 (296)
.++.++..++. +...++++|++.|++.+...+...+.+.+..+++ +|++.++++..
T Consensus 82 ~~~~~~~~~~~-----------------------~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 137 (381)
T PRK03633 82 AAGCAGLGLMV-----------------------GFWSWLAWRFVAGIGCAMIWVVVESALMCSGTSR-NRGRLLAAYMM 137 (381)
T ss_pred HHHHHHHHHhc-----------------------cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHH-HHHHHHHHHHH
Confidence 88877665442 3467888999999999988888777778888744 68999999999
Q ss_pred HHHHHHHHHHHHHHhhhccccch
Q 045564 209 LTYASTVISSAAFVYIEDNLSWR 231 (296)
Q Consensus 209 ~~~iG~~i~p~v~~~l~~~~gw~ 231 (296)
+.++|..+||.+.+++.+...|.
T Consensus 138 ~~~~g~~~g~~~~~~l~~~~~~~ 160 (381)
T PRK03633 138 VYYLGTVLGQLLVSKVSTELMSV 160 (381)
T ss_pred HHHHHHHHHHHHHhcccccccch
Confidence 99999999999999987754333
No 56
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.57 E-value=1.6e-13 Score=127.88 Aligned_cols=158 Identities=11% Similarity=-0.009 Sum_probs=119.7
Q ss_pred hHHHhHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhcchHHHHHHH-HHHHHHHHHHHHhhccccCC
Q 045564 66 LGEGWVANLMVYMIQEFHITSINSALISNIVNGFVNLFPVLGAIIADSFLGSFQVIWIS-SFISLLGTILLDSTATFDSL 144 (296)
Q Consensus 66 ~~y~~~~~l~~yl~~~lg~s~~~a~~i~~~~~~~~~~~~l~~G~laDr~iGR~~~i~i~-~~l~~ig~~~la~~~~~p~~ 144 (296)
+.......++.|+.+++|.|..+.+++.+.+.+...+..++.|+++|| +||||.+++. .++..++.++.+.+.
T Consensus 12 ~~~~~~~~l~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr-~g~r~~~~~~~~~~~~~~~~~~~~~~----- 85 (375)
T TIGR00899 12 AGALQFPTLSLFLSEEVRARPAMIGLFYTGSAIVGIAVSQLLATRSDY-QGDRKGLILFCCLLAALACLLFAWNR----- 85 (375)
T ss_pred HHHHHhhHHHHHHHcccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhc-cCCchHHHHHHHHHHHHHHHHHHhcc-----
Confidence 445556778889999999999999999999999999999999999999 7999876654 444444444443321
Q ss_pred CCCccCCCCcCcCCCCchhhHHHHHHHHHHHHhhchhhhhhhhhhhccCCCccchhhH--HHHHHHHHHHHHHHHHHHHH
Q 045564 145 RPQRCDIGLSLCKAPSKVQFAVLYSGIALACLGLGGLRFTLATMGANQFEIPQHQGIF--FNWFFILTYASTVISSAAFV 222 (296)
Q Consensus 145 ~~~~c~~~~~~~~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~~~ad~f~~~~~r~~~--f~~~y~~~~iG~~i~p~v~~ 222 (296)
+...+++.+++.+.+.+...|...++..|..|++ +|... .++.....++|..++|.+++
T Consensus 86 ------------------~~~~l~~~~~~~g~~~~~~~p~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~ig~~~~~ 146 (375)
T TIGR00899 86 ------------------NYFLLLVLGVLLSSFASTANPQLFALAREHADRT-GREAVMFSSVMRAQISLAWVIGPPLAF 146 (375)
T ss_pred ------------------hHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhhc-chhhHHHHHHHHHHHhHHHHHhhhHHH
Confidence 3455667777777777777787778888877643 34432 46667778899999999999
Q ss_pred hhhccccchhhHHHHHHHHHHHHHHH
Q 045564 223 YIEDNLSWRLGSGLNIAANLAGVVIF 248 (296)
Q Consensus 223 ~l~~~~gw~~~F~i~~~~~~~~~~~~ 248 (296)
++.+..|||+.|++.+++.++..++.
T Consensus 147 ~l~~~~~~~~~f~~~~~~~~~~~~~~ 172 (375)
T TIGR00899 147 WLALGFGFTVMFLTAALAFVLCGVLV 172 (375)
T ss_pred HHHHhcccHHHHHHHHHHHHHHHHHH
Confidence 99988999999999888665554443
No 57
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.57 E-value=2.7e-13 Score=128.97 Aligned_cols=170 Identities=11% Similarity=0.072 Sum_probs=132.5
Q ss_pred ccCCchhHHHHHHHHH--H-hHHHhHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhcchHHHHHHHH
Q 045564 49 KRGGRTALLSRTVTCL--T-LGEGWVANLMVYMIQEFHITSINSALISNIVNGFVNLFPVLGAIIADSFLGSFQVIWISS 125 (296)
Q Consensus 49 ~~~~~~~~~~l~~~~~--~-~~y~~~~~l~~yl~~~lg~s~~~a~~i~~~~~~~~~~~~l~~G~laDr~iGR~~~i~i~~ 125 (296)
+-+.||.+....+..+ . +.+....+++.|+ +++|.+..+.+++.+.+.++..++.+++|+++|| +||||++..+.
T Consensus 8 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~-~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~dr-~g~k~~l~~~~ 85 (402)
T TIGR00897 8 KIGIPLNLLWGYIGVVVFMTGDGLEQGWLSPFL-KALGLSPQQSASAFTLYGIAAAISAWISGVVAEI-IGPLKTMMIGL 85 (402)
T ss_pred HcCCCchhhHHHHHHHHHHHhhhhHHHhHHHHH-HHhCCCHHHhHHHHHHHHHHHHHHHHHHHHHHHH-cCcHHHHHHHH
Confidence 4567777777766666 3 4444556677777 6789999999999999999999999999999999 79999999999
Q ss_pred HHHHHHHHHHHhhccccCCCCCccCCCCcCcCCCCchhhHHHHHHHHHHHHhhchhhhhhhhhhhccCCCccchhhHHHH
Q 045564 126 FISLLGTILLDSTATFDSLRPQRCDIGLSLCKAPSKVQFAVLYSGIALACLGLGGLRFTLATMGANQFEIPQHQGIFFNW 205 (296)
Q Consensus 126 ~l~~ig~~~la~~~~~p~~~~~~c~~~~~~~~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~~~ad~f~~~~~r~~~f~~ 205 (296)
++..++.+++...... ..+...+++.|++.|+|.+...+...+.+.+.+|+ ++|+++.++
T Consensus 86 ~~~~~~~~~~~~~~~~-------------------~~~~~~l~~~~~i~G~g~~~~~~~~~~~~~~~~~~-~~~g~~~g~ 145 (402)
T TIGR00897 86 LLWCVGHAAFIVFGLG-------------------HANYPLILLFYGIRGLGYPLFAYSFLVWVVYNTKQ-DNLSSAVGW 145 (402)
T ss_pred HHHHHHHHHHHHHhcc-------------------CccHHHHHHHHHHHHcchHHHHhHHHHHHHHhCCH-HHHHHHHHH
Confidence 9888876554322100 01345677889999999887777777888888884 478999999
Q ss_pred HHHHHHHHH-HHHHHHHHhhhccccchhhHHHHHHH
Q 045564 206 FFILTYAST-VISSAAFVYIEDNLSWRLGSGLNIAA 240 (296)
Q Consensus 206 ~y~~~~iG~-~i~p~v~~~l~~~~gw~~~F~i~~~~ 240 (296)
++.+.++|. .++|.+++++.+..||+..+|.....
T Consensus 146 ~~~~~~~g~~~~g~~~~~~l~~~~g~~~~~~~~~~~ 181 (402)
T TIGR00897 146 FWAVYSIGIGVFGSYYSSYAIPAFGEMNTLWSALAF 181 (402)
T ss_pred HHHHHHHHHHHHHHHHHHhcccccchHHHHHHHHHH
Confidence 999999996 58999999998888977666655443
No 58
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.56 E-value=5.5e-13 Score=126.50 Aligned_cols=159 Identities=11% Similarity=0.069 Sum_probs=120.8
Q ss_pred hHHHhHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhcchHHHHHHHHHHHHHHHHHHHhhccccCCC
Q 045564 66 LGEGWVANLMVYMIQEFHITSINSALISNIVNGFVNLFPVLGAIIADSFLGSFQVIWISSFISLLGTILLDSTATFDSLR 145 (296)
Q Consensus 66 ~~y~~~~~l~~yl~~~lg~s~~~a~~i~~~~~~~~~~~~l~~G~laDr~iGR~~~i~i~~~l~~ig~~~la~~~~~p~~~ 145 (296)
.++....+++.|+++++|++..+++.+.+...+...++.+++|+++|| +|||+.+..+.+...+....+...
T Consensus 231 ~~~~~~~~~p~~l~~~~~~~~~~~g~~~~~~~~~~i~~~~~~G~l~dr-~g~~~~~~~~~~~~~~~~~~~~~~------- 302 (393)
T PRK15011 231 TNSLYIINMPLFIINELHLPEKLAGVMMGTAAGLEIPTMLIAGYFAKR-LGKRFLMRVAAVAGVCFYAGMLMA------- 302 (393)
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hChHHHHHHHHHHHHHHHHHHHHH-------
Confidence 444455678889999999999999888888778888899999999999 799998877665544433222111
Q ss_pred CCccCCCCcCcCCCCchhhHHHHHHHHHHHHhhchhhhhhhhhhhccCCCccchhhHHHHHHHHHHHHHHHHHHHHHhhh
Q 045564 146 PQRCDIGLSLCKAPSKVQFAVLYSGIALACLGLGGLRFTLATMGANQFEIPQHQGIFFNWFFILTYASTVISSAAFVYIE 225 (296)
Q Consensus 146 ~~~c~~~~~~~~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~~~ad~f~~~~~r~~~f~~~y~~~~iG~~i~p~v~~~l~ 225 (296)
.+...+++.+++.+++.|...+..++...|.+|+ +|++..++++...++|..++|.++|++.
T Consensus 303 ----------------~~~~~~l~~~~l~~~~~g~~~~~~~~~~~~~~p~--~~g~~~~~~~~~~~lg~~~g~~l~G~i~ 364 (393)
T PRK15011 303 ----------------HSPAILLGLQLLNAIYIGILGGIGMLYFQDLMPG--QAGSATTLYTNTSRVGWIIAGSLAGIVA 364 (393)
T ss_pred ----------------hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC--CcchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1223455566677777666666677778898884 4788888888888999999999999999
Q ss_pred ccccchhhHHHHHHHHHHHHHHHHh
Q 045564 226 DNLSWRLGSGLNIAANLAGVVIFLS 250 (296)
Q Consensus 226 ~~~gw~~~F~i~~~~~~~~~~~~~~ 250 (296)
+..||+..|++..++.++++++.+.
T Consensus 365 ~~~g~~~~~~~~~~~~~~~~~~~~~ 389 (393)
T PRK15011 365 EIWNYHAVFWFALVMIIATLFCLLR 389 (393)
T ss_pred HHhhhHHHHHHHHHHHHHHHHHHHh
Confidence 9889999999888877776665543
No 59
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.55 E-value=1.9e-13 Score=132.21 Aligned_cols=152 Identities=7% Similarity=-0.037 Sum_probs=119.0
Q ss_pred HHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhcchHHHHHHHHHHHHHHHHHHHhhccccCCCCCccCC
Q 045564 72 ANLMVYMIQEFHITSINSALISNIVNGFVNLFPVLGAIIADSFLGSFQVIWISSFISLLGTILLDSTATFDSLRPQRCDI 151 (296)
Q Consensus 72 ~~l~~yl~~~lg~s~~~a~~i~~~~~~~~~~~~l~~G~laDr~iGR~~~i~i~~~l~~ig~~~la~~~~~p~~~~~~c~~ 151 (296)
....+|+.++ |++..+.+++.+.+.++..++.+++|+++|| +|||+++.++.++..++.+.+++.. ..
T Consensus 49 ~~~~p~l~~~-g~s~~~~g~~~~~~~i~~~~~~~~~G~l~Dr-~g~k~~l~~~~~~~~i~~~~~~~~~---~~------- 116 (452)
T PRK11273 49 ALAMPYLVEQ-GFSRGDLGFALSGISIAYGFSKFIMGSVSDR-SNPRVFLPAGLILAAAVMLFMGFVP---WA------- 116 (452)
T ss_pred HHhhHHHHHc-CCCHHHHHHHHHHHHHHHHHHHhhhhhhhhc-cCCchhHHHHHHHHHHHHHHHHhhh---cc-------
Confidence 3444577777 9999999999999999999999999999999 7999999999998888777665432 00
Q ss_pred CCcCcCCCCchhhHHHHHHHHHHHHhhchhhhhhhhhhhccCCCccchhhHHHHHHHHHHHHHH-HHHHHHHhhhccccc
Q 045564 152 GLSLCKAPSKVQFAVLYSGIALACLGLGGLRFTLATMGANQFEIPQHQGIFFNWFFILTYASTV-ISSAAFVYIEDNLSW 230 (296)
Q Consensus 152 ~~~~~~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~~~ad~f~~~~~r~~~f~~~y~~~~iG~~-i~p~v~~~l~~~~gw 230 (296)
..+...+++.|++.|++.|...+.....+.|++|+ ++|+.+.++++.+.++|+. ++|++...+....||
T Consensus 117 ---------~~~~~~~~~~~~l~gi~~g~~~~~~~~~~~~~~~~-~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~gw 186 (452)
T PRK11273 117 ---------TSSIAVMFVLLFLCGWFQGMGWPPCGRTMVHWWSQ-KERGGIVSVWNCAHNVGGGLPPLLFLLGMAWFNDW 186 (452)
T ss_pred ---------cccHHHHHHHHHHHHHHHhccchHHHHHHHHhCCh-HHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHhccH
Confidence 01345677889999999998888888889999984 4689999999999999864 455543334334599
Q ss_pred hhhHHHHHHHHHHHH
Q 045564 231 RLGSGLNIAANLAGV 245 (296)
Q Consensus 231 ~~~F~i~~~~~~~~~ 245 (296)
|+.|++.++..++..
T Consensus 187 ~~~f~i~~~~~~~~~ 201 (452)
T PRK11273 187 HAALYMPAFAAILVA 201 (452)
T ss_pred HHHHHHHHHHHHHHH
Confidence 999999877555433
No 60
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=99.55 E-value=5.7e-13 Score=127.75 Aligned_cols=158 Identities=16% Similarity=0.119 Sum_probs=129.1
Q ss_pred hHHHhHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhcchHHHHHHHHHHHHHHHHHHHhhccccCCC
Q 045564 66 LGEGWVANLMVYMIQEFHITSINSALISNIVNGFVNLFPVLGAIIADSFLGSFQVIWISSFISLLGTILLDSTATFDSLR 145 (296)
Q Consensus 66 ~~y~~~~~l~~yl~~~lg~s~~~a~~i~~~~~~~~~~~~l~~G~laDr~iGR~~~i~i~~~l~~ig~~~la~~~~~p~~~ 145 (296)
..+++...+.+.+++++|++..+.+++.+.+..+..++.++.|++.|| +|||+++.++.++..+|.+++..+...
T Consensus 17 ~~~~~~~~l~~~~~~~~~~s~~~~g~l~s~~~~g~~i~~~~~g~l~~r-~G~r~~~~~g~~l~~~g~~l~~~~~~~---- 91 (410)
T TIGR00885 17 FANDITNPMVPQFQQAFTLTAFQAALVQSAFYGGYFIMAIPAAIFMKK-LSYKAGILLGLFLYALGAFLFWPAAEI---- 91 (410)
T ss_pred HHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCchHHHHHHHHHHHHHHHHHHHHHhh----
Confidence 344555566678899999999999999999999999999999999999 799999999999999988765433210
Q ss_pred CCccCCCCcCcCCCCchhhHHHHHHHHHHHHhhchhhhhhhhhhhccCCCccchhhHHHHHHHHHHHHHHHHHHHHHhhh
Q 045564 146 PQRCDIGLSLCKAPSKVQFAVLYSGIALACLGLGGLRFTLATMGANQFEIPQHQGIFFNWFFILTYASTVISSAAFVYIE 225 (296)
Q Consensus 146 ~~~c~~~~~~~~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~~~ad~f~~~~~r~~~f~~~y~~~~iG~~i~p~v~~~l~ 225 (296)
.+...+++++++.|+|.|...+..++++.+..|++ +|++..++.+...++|..++|.+.+.+.
T Consensus 92 ----------------~~~~~~l~~~~l~G~g~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~lG~~~g~~i~~~l~ 154 (410)
T TIGR00885 92 ----------------MNYTLFLVGLFILTAGLGFLETAANPYILVMGPES-TATRRLNLAQSFNPFGSIIGMVVAQQLI 154 (410)
T ss_pred ----------------ccHHHHHHHHHHHHhhHHHHHhhhhHHHHHHCCHh-HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 13567888999999999999999999999988844 5778888888889999999999888774
Q ss_pred cc--------------------------ccchhhHHHHHHHHHHHH
Q 045564 226 DN--------------------------LSWRLGSGLNIAANLAGV 245 (296)
Q Consensus 226 ~~--------------------------~gw~~~F~i~~~~~~~~~ 245 (296)
.. .+||++|.+.+++.++..
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~fl~~a~~~~~~~ 200 (410)
T TIGR00885 155 LSNLPHQSQDVLDKLSPEELSAIKHSDLASVQTPYMIIGAVVLAVA 200 (410)
T ss_pred hcCCccchhhhhhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 21 369999988776554433
No 61
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.55 E-value=1.3e-13 Score=132.83 Aligned_cols=152 Identities=7% Similarity=-0.026 Sum_probs=122.1
Q ss_pred HHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhcchHHHHHHHHHHHHHHHHHHHhhccccCCCCCccCCC
Q 045564 73 NLMVYMIQEFHITSINSALISNIVNGFVNLFPVLGAIIADSFLGSFQVIWISSFISLLGTILLDSTATFDSLRPQRCDIG 152 (296)
Q Consensus 73 ~l~~yl~~~lg~s~~~a~~i~~~~~~~~~~~~l~~G~laDr~iGR~~~i~i~~~l~~ig~~~la~~~~~p~~~~~~c~~~ 152 (296)
...+++.+ +|++..+.+++.+++.++..++.++.|+++|| +|||+.+.++.++..++.+++.... ..
T Consensus 48 ~~~p~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr-~g~~~~~~~~~~~~~~~~~~~~~~~---~~-------- 114 (438)
T TIGR00712 48 LAMPYLVE-QGFSKGELGFALSAISIAYGFSKFIMGSVSDR-SNPRVFLPAGLILSAAVMLLMGFVP---WA-------- 114 (438)
T ss_pred hhhHHHHH-cCCCHhHhHHHHHHHHHHHHHhhhccchhhhc-cCCceehHHHHHHHHHHHHHHhccc---cc--------
Confidence 34456665 59999999999999999999999999999999 7999999999888888776654331 11
Q ss_pred CcCcCCCCchhhHHHHHHHHHHHHhhchhhhhhhhhhhccCCCccchhhHHHHHHHHHHHHHHHHHHHHHhhh-ccccch
Q 045564 153 LSLCKAPSKVQFAVLYSGIALACLGLGGLRFTLATMGANQFEIPQHQGIFFNWFFILTYASTVISSAAFVYIE-DNLSWR 231 (296)
Q Consensus 153 ~~~~~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~~~ad~f~~~~~r~~~f~~~y~~~~iG~~i~p~v~~~l~-~~~gw~ 231 (296)
..+...+++.|++.+++.|...+.....+.|.+|++ +|+.++++++.+.++|+.++|.+.+++. +..+||
T Consensus 115 --------~~~~~~l~~~~~l~g~~~g~~~~~~~~~i~~~~~~~-~rg~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~w~ 185 (438)
T TIGR00712 115 --------TSSIAIMFVLLFLNGWFQGMGWPPCGRTMVHWWSQS-ERGTIVSIWNCAHNIGGGIPPLLVLLGMAWFNDWH 185 (438)
T ss_pred --------cchHHHHHHHHHHHHHHhhcchHHHHHHHHHhcCcc-cchhHHHHHHHHHHhHhHHHHHHHHHHHHHhhhhH
Confidence 013456677889999999988888889999999844 6899999999999999999988777644 446999
Q ss_pred hhHHHHHHHHHHHHH
Q 045564 232 LGSGLNIAANLAGVV 246 (296)
Q Consensus 232 ~~F~i~~~~~~~~~~ 246 (296)
+.|++.+++.++..+
T Consensus 186 ~~f~~~~~~~~i~~~ 200 (438)
T TIGR00712 186 AALYFPAICAIIVAL 200 (438)
T ss_pred HHHHHHHHHHHHHHH
Confidence 999998876655443
No 62
>PRK10133 L-fucose transporter; Provisional
Probab=99.55 E-value=7.9e-13 Score=127.82 Aligned_cols=153 Identities=14% Similarity=0.120 Sum_probs=116.6
Q ss_pred CCchhHHHHHHHHH--HhHHHhHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhcchHHHHHHHHHHH
Q 045564 51 GGRTALLSRTVTCL--TLGEGWVANLMVYMIQEFHITSINSALISNIVNGFVNLFPVLGAIIADSFLGSFQVIWISSFIS 128 (296)
Q Consensus 51 ~~~~~~~~l~~~~~--~~~y~~~~~l~~yl~~~lg~s~~~a~~i~~~~~~~~~~~~l~~G~laDr~iGR~~~i~i~~~l~ 128 (296)
++...+..+..+.+ .........+.+.+.+++|++..+.++..+.+.++..++.++.|+++|| +||||++.++.+++
T Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~~~~~~s~~~~gl~~~~~~~g~~i~~~~~g~l~dr-~G~r~~l~~g~~~~ 101 (438)
T PRK10133 23 SYIIPFALLCSLFFLWAVANNLNDILLPQFQQAFTLTNFQAGLIQSAFYFGYFIIPIPAGILMKK-LSYKAGIITGLFLY 101 (438)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCcHHHHHHHHHHH
Confidence 34444444444444 2223334444556689999999999999999999999999999999999 79999999999999
Q ss_pred HHHHHHHHhhccccCCCCCccCCCCcCcCCCCchhhHHHHHHHHHHHHhhchhhhhhhhhhhccCCCccchhhHHHHHHH
Q 045564 129 LLGTILLDSTATFDSLRPQRCDIGLSLCKAPSKVQFAVLYSGIALACLGLGGLRFTLATMGANQFEIPQHQGIFFNWFFI 208 (296)
Q Consensus 129 ~ig~~~la~~~~~p~~~~~~c~~~~~~~~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~~~ad~f~~~~~r~~~f~~~y~ 208 (296)
.++.+++...... .+...++++|++.|+|.|...+..++++.|..| +++|....+.+..
T Consensus 102 ~~~~~l~~~~~~a--------------------~~~~~ll~~r~l~G~g~g~~~~~~~~~v~~~~~-~~~~~~~~s~~~~ 160 (438)
T PRK10133 102 ALGAALFWPAAEI--------------------MNYTLFLVGLFIIAAGLGCLETAANPFVTVLGP-ESSGHFRLNLAQT 160 (438)
T ss_pred HHHHHHHHHHHhc--------------------CCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCC-hhhHHHHHHHHHH
Confidence 9988765322211 145678899999999999999999999998765 3355556777777
Q ss_pred HHHHHHHHHHHHHHhhh
Q 045564 209 LTYASTVISSAAFVYIE 225 (296)
Q Consensus 209 ~~~iG~~i~p~v~~~l~ 225 (296)
...+|..+||.+++.+.
T Consensus 161 ~~~~G~~~g~~~g~~l~ 177 (438)
T PRK10133 161 FNSFGAIIAVVFGQSLI 177 (438)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 88889999988876543
No 63
>PRK15075 citrate-proton symporter; Provisional
Probab=99.55 E-value=4.7e-13 Score=128.69 Aligned_cols=154 Identities=12% Similarity=0.067 Sum_probs=111.8
Q ss_pred hHHHHHHHHHHHhCCChhHHHH-HHHHHHHH-----HHHHHHHHHHHhhhhcchHHHHHHHHHHHHHHHHHHHhhccccC
Q 045564 70 WVANLMVYMIQEFHITSINSAL-ISNIVNGF-----VNLFPVLGAIIADSFLGSFQVIWISSFISLLGTILLDSTATFDS 143 (296)
Q Consensus 70 ~~~~l~~yl~~~lg~s~~~a~~-i~~~~~~~-----~~~~~l~~G~laDr~iGR~~~i~i~~~l~~ig~~~la~~~~~p~ 143 (296)
....+.+.+.++++.+..+.+. ..+..... ..++.++.|+++|| +||||.++++.+++.++.++++++..+..
T Consensus 33 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr-~Grr~~l~~~~~~~~~~~~l~~~~~~~~~ 111 (434)
T PRK15075 33 LFGFYATAIAKTFFPAGNEFASLMLTFAVFGAGFLMRPLGAIVLGAYIDR-VGRRKGLIVTLSIMASGTLLIAFVPGYAT 111 (434)
T ss_pred HHHHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHhhhHHHHHHHHhhh-hchHHHHHHHHHHHHHHHHHHHhCCcHHH
Confidence 3455666888899988766443 33322221 23578899999999 79999999999999998887765431100
Q ss_pred CCCCccCCCCcCcCCCCchhhHHHHHHHHHHHHhhchhhhhhhhhhhccCCCccchhhHHHHHHHHHHHHHHHHHHHHHh
Q 045564 144 LRPQRCDIGLSLCKAPSKVQFAVLYSGIALACLGLGGLRFTLATMGANQFEIPQHQGIFFNWFFILTYASTVISSAAFVY 223 (296)
Q Consensus 144 ~~~~~c~~~~~~~~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~~~ad~f~~~~~r~~~f~~~y~~~~iG~~i~p~v~~~ 223 (296)
+. ......++++|++.|++.|...+....+++|.+|+ ++|+...+++....++|..+++.+++.
T Consensus 112 ~~---------------~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~-~~rg~~~~~~~~~~~~g~~~g~~~g~~ 175 (434)
T PRK15075 112 IG---------------LAAPLLVLLGRLLQGFSAGVELGGVSVYLAEIATP-GRKGFYTSWQSASQQVAVVFAALLGYL 175 (434)
T ss_pred HH---------------HHHHHHHHHHHHHhhccccccHHHHHHHHHhhCCc-ccchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 00 00012468889999999999999899999999994 478999998888878887777777666
Q ss_pred h--------hccccchhhHHHHHHH
Q 045564 224 I--------EDNLSWRLGSGLNIAA 240 (296)
Q Consensus 224 l--------~~~~gw~~~F~i~~~~ 240 (296)
+ .+.+|||+.|++..+.
T Consensus 176 l~~~~~~~~~~~~gWr~~f~~~~~~ 200 (434)
T PRK15075 176 LNQWLSPAQMAEWGWRIPFLIGCLI 200 (434)
T ss_pred HHHhCCHHHHhccchHHHHHHHHHH
Confidence 5 2467999999986543
No 64
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=99.55 E-value=5.1e-13 Score=128.93 Aligned_cols=149 Identities=11% Similarity=0.008 Sum_probs=127.1
Q ss_pred HHHHHHHHHHhCCChhH-HHHHHHHHHHHHHHHHHHHHHHhhhhcchHHHHHHHHHHHHHHHHHHHhhccccCCCCCccC
Q 045564 72 ANLMVYMIQEFHITSIN-SALISNIVNGFVNLFPVLGAIIADSFLGSFQVIWISSFISLLGTILLDSTATFDSLRPQRCD 150 (296)
Q Consensus 72 ~~l~~yl~~~lg~s~~~-a~~i~~~~~~~~~~~~l~~G~laDr~iGR~~~i~i~~~l~~ig~~~la~~~~~p~~~~~~c~ 150 (296)
+.+..|+.+++|++.++ .+.+.+++..++.++.+++|+++|| +|-||++.++.+.+.+..+++.++.
T Consensus 46 s~a~p~L~~elglT~~qv~G~I~s~F~ysYal~qIp~GlLaDr-lG~K~vL~l~~l~Wsl~t~L~~fa~----------- 113 (511)
T TIGR00806 46 SFITPYLLTVLNFTEETVTNEIIPVLPYSHLAVLVPVFLLTDY-LRYKPVLVLQALSFVCVWLLLLLGT----------- 113 (511)
T ss_pred HHHHHHHHHHcCCCHHHhcchHHHHHHHHHHHHHHHHHHHHHH-hCchHHHHHHHHHHHHHHHHHHHHH-----------
Confidence 44556899999999999 9999999999999999999999999 7999999999999998887777653
Q ss_pred CCCcCcCCCCchhhHHHHHHHHHHHHhhchhhhhhhhhhhccCCCccchhhHHHHHHHHHHHHHHHHHHHHHhhhccccc
Q 045564 151 IGLSLCKAPSKVQFAVLYSGIALACLGLGGLRFTLATMGANQFEIPQHQGIFFNWFFILTYASTVISSAAFVYIEDNLSW 230 (296)
Q Consensus 151 ~~~~~~~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~~~ad~f~~~~~r~~~f~~~y~~~~iG~~i~p~v~~~l~~~~gw 230 (296)
+...+.+.|++.|++.|... ....++...+| +++|+++.+++..+.++|.++++++++++. .+||
T Consensus 114 ------------Sl~~L~i~R~llGvaEA~~~-A~~syI~~WfP-~kER~ratsi~~sg~~vG~~Ia~~L~qll~-s~gW 178 (511)
T TIGR00806 114 ------------SVWHMQLMEVFYSVTMAARI-AYSSYIFSLVP-PSRYQRAAAYSRAAVLLGVFLSSVLGQLLV-TLGW 178 (511)
T ss_pred ------------HHHHHHHHHHHHHHHHHHHH-HHHHHHHHHCC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hcCc
Confidence 35678899999999999988 99999999999 457999999999999999999999999954 6799
Q ss_pred hhhHHH---HHHHHHHHHHH
Q 045564 231 RLGSGL---NIAANLAGVVI 247 (296)
Q Consensus 231 ~~~F~i---~~~~~~~~~~~ 247 (296)
++-+.+ ......+++++
T Consensus 179 r~y~~Ln~Isl~s~~~a~~~ 198 (511)
T TIGR00806 179 ISYSTLNIISLVFMTFSVFL 198 (511)
T ss_pred hhHHHHHHHHHHHHHHHHHH
Confidence 876554 44444444443
No 65
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.54 E-value=6.9e-13 Score=129.69 Aligned_cols=183 Identities=9% Similarity=0.059 Sum_probs=126.6
Q ss_pred CCchhHHHHHHHHH--H-hHHHhHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhcchHHHHHHHHHH
Q 045564 51 GGRTALLSRTVTCL--T-LGEGWVANLMVYMIQEFHITSINSALISNIVNGFVNLFPVLGAIIADSFLGSFQVIWISSFI 127 (296)
Q Consensus 51 ~~~~~~~~l~~~~~--~-~~y~~~~~l~~yl~~~lg~s~~~a~~i~~~~~~~~~~~~l~~G~laDr~iGR~~~i~i~~~l 127 (296)
++++.+...+...+ . .+|++..++++|+++.+|++..++........++..++.+++|+++|| +|||+++.++.++
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr-~grr~~~~~~~~~ 325 (490)
T PRK10642 247 KHWRSLLTCIGLVIATNVTYYMLLTYMPSYLSHNLHYSEDHGVLIIIAIMIGMLFVQPVMGLLSDR-FGRRPFVILGSVA 325 (490)
T ss_pred HhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hccHHHHHHHHHH
Confidence 34555544444333 5 788888999999999999998888888888888899999999999999 7999998888765
Q ss_pred HHHHHHHHHhhccccCCCCCccCCCCcCcCCCCchhhHHHHHHHHHHHHhhchhhhhhhhhhhccCCCccchhhHHHHHH
Q 045564 128 SLLGTILLDSTATFDSLRPQRCDIGLSLCKAPSKVQFAVLYSGIALACLGLGGLRFTLATMGANQFEIPQHQGIFFNWFF 207 (296)
Q Consensus 128 ~~ig~~~la~~~~~p~~~~~~c~~~~~~~~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~~~ad~f~~~~~r~~~f~~~y 207 (296)
..++.+.+...... .+...+++++++.+++.+...+...++..+.+|++ .|+++.++.|
T Consensus 326 ~~~~~~~~~~~~~~--------------------~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~~~p~~-~Rg~~~g~~~ 384 (490)
T PRK10642 326 LFVLAIPAFILINS--------------------NVIGLIFAGLLMLAVILNCFTGVMASTLPAMFPTH-IRYSALAAAF 384 (490)
T ss_pred HHHHHHHHHHHHhC--------------------CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCc-cchHHHHHHH
Confidence 44333221111100 12345667777877777766777788888999954 7899999844
Q ss_pred HHHHHHHHHHHHHHHhhhccc-cchhhHHHHHHHHHHHHHH--HHhCCCch
Q 045564 208 ILTYASTVISSAAFVYIEDNL-SWRLGSGLNIAANLAGVVI--FLSGKHFY 255 (296)
Q Consensus 208 ~~~~iG~~i~p~v~~~l~~~~-gw~~~F~i~~~~~~~~~~~--~~~~~~~~ 255 (296)
....+++.++|.+.+++.+.. +|+.++++..+..+++++. ++.++|++
T Consensus 385 ~~~~~~g~~~p~i~g~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~pes~~~ 435 (490)
T PRK10642 385 NISVLVAGLTPTLAAWLVESTQNLMMPAYYLMVVAVIGLITGVTMKETANR 435 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHhccccCC
Confidence 445666788999999998765 4666665544443333333 33455544
No 66
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=99.53 E-value=5.6e-13 Score=126.78 Aligned_cols=140 Identities=14% Similarity=0.083 Sum_probs=117.8
Q ss_pred HHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhcchHHHHHHHHHHHHHHHHHHHhhccccCCCCCccCCCCcCc
Q 045564 77 YMIQEFHITSINSALISNIVNGFVNLFPVLGAIIADSFLGSFQVIWISSFISLLGTILLDSTATFDSLRPQRCDIGLSLC 156 (296)
Q Consensus 77 yl~~~lg~s~~~a~~i~~~~~~~~~~~~l~~G~laDr~iGR~~~i~i~~~l~~ig~~~la~~~~~p~~~~~~c~~~~~~~ 156 (296)
.+.+++|.+..+.+++.+.+.+...++.+++|+++|| +||||++.++.++..++.+.+....
T Consensus 28 ~~~~~~~~s~~~~~~~~~~~~l~~~l~~~~~G~laDr-~grr~vl~~~~~~~~~~~~~~~~~~----------------- 89 (393)
T PRK11195 28 ALLKELHYPDWSQPLLQMFFVLAYIVLAPFVGAFADS-FPKGRVMFIANGIKLLGCLLMLFGI----------------- 89 (393)
T ss_pred HHHHHcCCcHHHHHHHHHHHHHHHHHHHhhhhHhhhc-cCCchhhHHHHHHHHHHHHHHHHHH-----------------
Confidence 3467899999999999999999999999999999999 7999999999999888766554321
Q ss_pred CCCCchhhHHHHHHHHHHHHhhchhhhhhhhhhhccCCCccchhhHHHHHHHHHHHHHHHHHHHHHhhhccccchhhHHH
Q 045564 157 KAPSKVQFAVLYSGIALACLGLGGLRFTLATMGANQFEIPQHQGIFFNWFFILTYASTVISSAAFVYIEDNLSWRLGSGL 236 (296)
Q Consensus 157 ~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~~~ad~f~~~~~r~~~f~~~y~~~~iG~~i~p~v~~~l~~~~gw~~~F~i 236 (296)
+ .++.|++.|++.+...|...+++.|.+|++ +|+++.++.....++|..+||.++|++.+. .|+..+.+
T Consensus 90 ------~---~~~~r~l~G~~~a~~~pa~~a~i~~~~~~~-~~~~a~~~~~~~~~~~~~~Gp~lgG~l~~~-~~~~~~~i 158 (393)
T PRK11195 90 ------H---PLLAYGLVGIGAAAYSPAKYGILTELLPGE-KLVKANGWMEGSTIAAILLGTVLGGALADP-HAEAALAV 158 (393)
T ss_pred ------H---HHHHHHHHHHHHHHHHHHHHHHHHHHcCHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHH
Confidence 1 267789999999999999999999999954 789999999999999999999999999874 47777776
Q ss_pred HHHHHHHHH
Q 045564 237 NIAANLAGV 245 (296)
Q Consensus 237 ~~~~~~~~~ 245 (296)
.+...+++.
T Consensus 159 ~~~~~~~~~ 167 (393)
T PRK11195 159 CALIYLLAA 167 (393)
T ss_pred HHHHHHHHH
Confidence 665444443
No 67
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.53 E-value=1.3e-12 Score=124.04 Aligned_cols=157 Identities=12% Similarity=0.115 Sum_probs=107.3
Q ss_pred hHHHhHHHHHHHHHHHhCCChhHHHHHHHHHHH-HHHHHHHHHHHHhhhhcchHHHHH-HHHHHHHHHHHHHHhhccccC
Q 045564 66 LGEGWVANLMVYMIQEFHITSINSALISNIVNG-FVNLFPVLGAIIADSFLGSFQVIW-ISSFISLLGTILLDSTATFDS 143 (296)
Q Consensus 66 ~~y~~~~~l~~yl~~~lg~s~~~a~~i~~~~~~-~~~~~~l~~G~laDr~iGR~~~i~-i~~~l~~ig~~~la~~~~~p~ 143 (296)
+.......++.|+.+++|.|.++.+.+.+.... ...++++++|+ +|| +||||.++ .+.++..++..+.+++.
T Consensus 30 ~~~~~~p~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~~~~-~dr-~g~r~~~~~~~~~~~~~~~~~~~~~~---- 103 (393)
T PRK15011 30 AGALQTPTLSIFLTDEVHARPAMVGFFFTGSAVIGILVSQFLAGR-SDK-RGDRKSLIVFCCLLGVLACTLFAWNR---- 103 (393)
T ss_pred HHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHH-Hhc-ccchhHHHHHHHHHHHHHHHHHHHhh----
Confidence 555567788999999999999999998766544 55666666677 999 79998755 44454445544443321
Q ss_pred CCCCccCCCCcCcCCCCchhhHHHHHH-HHHHHHhhchhhhhhhhhhhccCCCccchh-hHHHHHHHHHHHHHHHHHHHH
Q 045564 144 LRPQRCDIGLSLCKAPSKVQFAVLYSG-IALACLGLGGLRFTLATMGANQFEIPQHQG-IFFNWFFILTYASTVISSAAF 221 (296)
Q Consensus 144 ~~~~~c~~~~~~~~~~~~~~~~~l~~~-~~l~gig~g~~~~~~~~~~ad~f~~~~~r~-~~f~~~y~~~~iG~~i~p~v~ 221 (296)
+...+++. +++.+.+ +...|...++..|..+++++.. ...++...+.++|..++|.++
T Consensus 104 -------------------~~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~g~~i~ 163 (393)
T PRK15011 104 -------------------NYFVLLFVGVFLSSFG-STANPQMFALAREHADKTGREAVMFSSFLRAQVSLAWVIGPPLA 163 (393)
T ss_pred -------------------HHHHHHHHHHHHHHHH-HhhHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHHHHhhHHH
Confidence 23344333 4444443 4567777787788666332222 223567788899999999999
Q ss_pred HhhhccccchhhHHHHHHHHHHHHHHH
Q 045564 222 VYIEDNLSWRLGSGLNIAANLAGVVIF 248 (296)
Q Consensus 222 ~~l~~~~gw~~~F~i~~~~~~~~~~~~ 248 (296)
+++.+..|||+.|++.++..++..+..
T Consensus 164 ~~l~~~~gw~~~f~~~~~~~~~~~~~~ 190 (393)
T PRK15011 164 YALAMGFSFTVMYLSAAVAFIVCGVMV 190 (393)
T ss_pred HHHHHhcChHHHHHHHHHHHHHHHHHH
Confidence 999988999999998877655544443
No 68
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=99.53 E-value=2.7e-13 Score=126.40 Aligned_cols=152 Identities=14% Similarity=0.221 Sum_probs=122.9
Q ss_pred HHHhHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhcchHHHHHHHHHHHHHHHHHHHhhccccCCCC
Q 045564 67 GEGWVANLMVYMIQEFHITSINSALISNIVNGFVNLFPVLGAIIADSFLGSFQVIWISSFISLLGTILLDSTATFDSLRP 146 (296)
Q Consensus 67 ~y~~~~~l~~yl~~~lg~s~~~a~~i~~~~~~~~~~~~l~~G~laDr~iGR~~~i~i~~~l~~ig~~~la~~~~~p~~~~ 146 (296)
++.........+.+++|++..+.+++.+++.++..++.++.|+++|| +||||++.++.++..++.+.. .. +
T Consensus 15 ~~~~~~~~lp~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr-~g~r~~~~~~~~~~~~~~~~~-~~---~---- 85 (355)
T TIGR00896 15 ALTSVGPLLPQIRSALGMSFSVAGLLTALPVLCFAVLAPLAPWLARR-FGEERSVAAGLLLIAAGILIR-SA---P---- 85 (355)
T ss_pred ccccCcccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHH-hCchHHHHHHHHHHHHHHHHH-Hh---c----
Confidence 33344455556788999999999999999999999999999999999 799999999988877766544 21 1
Q ss_pred CccCCCCcCcCCCCchhhHHHHHHHHHHHHhhchhhhhhhhhhhccCCCccchhhHHHHHHHHHHHHHHHHHHHHHhhhc
Q 045564 147 QRCDIGLSLCKAPSKVQFAVLYSGIALACLGLGGLRFTLATMGANQFEIPQHQGIFFNWFFILTYASTVISSAAFVYIED 226 (296)
Q Consensus 147 ~~c~~~~~~~~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~~~ad~f~~~~~r~~~f~~~y~~~~iG~~i~p~v~~~l~~ 226 (296)
+...+++.|++.|++.+...+..+....|.+| + +|++..++++.+.++|..+++.+.+++.+
T Consensus 86 ----------------~~~~l~~~~~~~g~g~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~g~~i~~~~~~~l~~ 147 (355)
T TIGR00896 86 ----------------GTALLFAGTALIGVGIAIINVLLPSLIKRDFP-Q-RVGLMTGLYSMALMGGAALAAAATVPLAQ 147 (355)
T ss_pred ----------------cHHHHHHHHHHHHHHHHHHhccchHHHHHhCc-c-hhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 23567788999999999888888888899887 3 58889999999999999999999998876
Q ss_pred cc--cchhhHHHHHHHHHHHH
Q 045564 227 NL--SWRLGSGLNIAANLAGV 245 (296)
Q Consensus 227 ~~--gw~~~F~i~~~~~~~~~ 245 (296)
.. +||+.|.+.++..++..
T Consensus 148 ~~~~~w~~~f~~~~~~~~~~~ 168 (355)
T TIGR00896 148 HSGGHWQQALAWWALPALLAL 168 (355)
T ss_pred hhhhhHHHHHHHHHHHHHHHH
Confidence 64 39988887666444433
No 69
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=99.53 E-value=1.8e-12 Score=125.83 Aligned_cols=174 Identities=11% Similarity=0.004 Sum_probs=122.0
Q ss_pred hhHHHHHHHHH-H-hHHHhHHHHHHHHHH-HhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhcchHHHHHHHHHHHHH
Q 045564 54 TALLSRTVTCL-T-LGEGWVANLMVYMIQ-EFHITSINSALISNIVNGFVNLFPVLGAIIADSFLGSFQVIWISSFISLL 130 (296)
Q Consensus 54 ~~~~~l~~~~~-~-~~y~~~~~l~~yl~~-~lg~s~~~a~~i~~~~~~~~~~~~l~~G~laDr~iGR~~~i~i~~~l~~i 130 (296)
|.+........ . ..-...+.+...+.+ ++|+|.+|.+++.++..+...++.+..|++.|| +|.|+++.++.++..+
T Consensus 34 r~l~~s~~~f~~~F~~w~~~~~l~~~~~~~~~~ls~~q~g~l~ai~~l~~al~rip~G~l~Dr-~G~R~v~~~~~ll~~i 112 (462)
T PRK15034 34 RNLWISVSCLLLAFCVWMLFSAVTVNLNKIGFNFTTDQLFLLTALPSVSGALLRVPYSFMVPI-FGGRRWTVFSTAILII 112 (462)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCChHHHHHHHHHHHH
Confidence 55544444333 2 222234444556554 799999999999999999999999999999999 7999999999999888
Q ss_pred HHHHHHhhccccCCCCCccCCCCcCcCCCCchhhHHHHHHHHHHHHhhchhhhhhhhhhhccCCCccchhhHHHHHHHHH
Q 045564 131 GTILLDSTATFDSLRPQRCDIGLSLCKAPSKVQFAVLYSGIALACLGLGGLRFTLATMGANQFEIPQHQGIFFNWFFILT 210 (296)
Q Consensus 131 g~~~la~~~~~p~~~~~~c~~~~~~~~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~~~ad~f~~~~~r~~~f~~~y~~~ 210 (296)
..+.++++. +.. ..+...+++.|++.|++ |...+.....+++.||+ ++|+.+.+++....
T Consensus 113 ~~~~~~~a~--~~~----------------~~s~~~lli~r~l~Gig-g~~f~~~~~~vs~wfp~-~~rG~A~Gi~~g~G 172 (462)
T PRK15034 113 PCVWLGIAV--QNP----------------NTPFGIFIVIALLCGFA-GANFASSMGNISFFFPK-AKQGSALGINGGLG 172 (462)
T ss_pred HHHHHHHHH--ccc----------------CCCHHHHHHHHHHHHHH-HHhHHHHHHHHHHHCCH-hHhHHHHHHHHHHH
Confidence 887776541 000 02457889999999998 66788888999999994 47899999986666
Q ss_pred HHHHHHHHHHHHhhh-----c-------------cccchhhHHHHHHHHHHHHHHH
Q 045564 211 YASTVISSAAFVYIE-----D-------------NLSWRLGSGLNIAANLAGVVIF 248 (296)
Q Consensus 211 ~iG~~i~p~v~~~l~-----~-------------~~gw~~~F~i~~~~~~~~~~~~ 248 (296)
|+|..+++++...+. + ..+|+..+++..+..++..++.
T Consensus 173 ~~G~~l~~~l~p~~i~~~l~~~~G~~~~~~~~g~~~~~~~~~~~~~~~~iv~~i~~ 228 (462)
T PRK15034 173 NLGVSVMQLVAPLVIFVPVFAFLGVNGVPQADGSVMSLANAAWIWVPLLAIATIAA 228 (462)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHhccccccccccchHHHHHHHHHHHHHHHHHHHHH
Confidence 777665554433221 2 2346666666666544444333
No 70
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=99.52 E-value=6.6e-14 Score=141.29 Aligned_cols=198 Identities=14% Similarity=0.102 Sum_probs=144.6
Q ss_pred CCchhHHHHHHHHH--H-hHHHhHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhcchHHHHHHHHHH
Q 045564 51 GGRTALLSRTVTCL--T-LGEGWVANLMVYMIQEFHITSINSALISNIVNGFVNLFPVLGAIIADSFLGSFQVIWISSFI 127 (296)
Q Consensus 51 ~~~~~~~~l~~~~~--~-~~y~~~~~l~~yl~~~lg~s~~~a~~i~~~~~~~~~~~~l~~G~laDr~iGR~~~i~i~~~l 127 (296)
.++|.+++.+.... . .+.+......+-+.++++++..+.+++.+.+.++..++.++.|+++|| +||||.+.++.++
T Consensus 29 ~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~iek~F~lss~~~G~i~s~~~i~~~~~~i~v~~~~~r-~~r~~~i~~g~ll 107 (633)
T TIGR00805 29 SKIKVFSLLLTCAQLQGLLYNGLVNSSLTTIERRFKLSTSSSGLINGSYEIGNLLLIIFVSYFGTK-LHRPIVIGIGCAI 107 (633)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHhhchhhhhhhCCCCCcceeeeehhhHHHHHHHHHHHHhhcc-cCcceEEEecHHH
Confidence 34554433333233 3 445556666678889999999999999999999999999999999999 7999999999999
Q ss_pred HHHHHHHHHhhccccC-C---------------CCCccCCCC----------cCcCCCC--chhhHHHHHHHHHHHHhhc
Q 045564 128 SLLGTILLDSTATFDS-L---------------RPQRCDIGL----------SLCKAPS--KVQFAVLYSGIALACLGLG 179 (296)
Q Consensus 128 ~~ig~~~la~~~~~p~-~---------------~~~~c~~~~----------~~~~~~~--~~~~~~l~~~~~l~gig~g 179 (296)
+.+|.++.+++.++.. + ...-|.... ..|.... ......++++|++.|+|.+
T Consensus 108 ~~lg~ll~alphf~~~~y~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~~ 187 (633)
T TIGR00805 108 MGLGSFLLSLPHFLSGRYSYSTTVSSTGNLSSANSFLCMENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIGAT 187 (633)
T ss_pred HHHHHHHHhChHHhcCCccccccccccccccccccccccCCCCCCccccccccccccccCCCceehhhHHHHHHHhccCC
Confidence 9999999887642110 0 001121000 0111111 1124567899999999999
Q ss_pred hhhhhhhhhhhccCCCccchhhHHHHHHHHHHHHHHHHHHHHHhhhccc----------------------cchhhHHHH
Q 045564 180 GLRFTLATMGANQFEIPQHQGIFFNWFFILTYASTVISSAAFVYIEDNL----------------------SWRLGSGLN 237 (296)
Q Consensus 180 ~~~~~~~~~~ad~f~~~~~r~~~f~~~y~~~~iG~~i~p~v~~~l~~~~----------------------gw~~~F~i~ 237 (296)
...+...+++.|.+|++ +|+..+++++.+..+|..+|+++++++.+.+ +|+.+|++.
T Consensus 188 ~~~~~~~~~i~d~~~~~-~~~~~~~i~~~~~~iG~~lG~llgg~l~~~~~d~~~~~~~~~~l~~~dprWiGaWwl~Fli~ 266 (633)
T TIGR00805 188 PIFPLGISYIDDFAKSK-NSPLYIGILESIAVFGPAFGYLLGSFCLQIYVDTGSVNTEDVILTPTDPRWIGAWWIGFLIC 266 (633)
T ss_pred cchhcCchhhhccCCcc-ccHHHHHHHHHHHHhhhHHHHHHHHHHHhcccccccCCCCCCCCCCCCccHHHHHHHHHHHH
Confidence 99999999999999954 7899999999999999999999999887543 277778887
Q ss_pred HHHHHHHHHHHHh
Q 045564 238 IAANLAGVVIFLS 250 (296)
Q Consensus 238 ~~~~~~~~~~~~~ 250 (296)
+++.++..+.++.
T Consensus 267 g~l~~l~~v~l~~ 279 (633)
T TIGR00805 267 GGVALLTSIPFFF 279 (633)
T ss_pred HHHHHHHHHHHHh
Confidence 7765554444433
No 71
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=99.52 E-value=1.2e-13 Score=133.65 Aligned_cols=143 Identities=12% Similarity=-0.037 Sum_probs=122.8
Q ss_pred HhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhcchHHHHHHHHHHHHHHHHHHHhhccccCCCCCccCCCCcCcCCCC
Q 045564 81 EFHITSINSALISNIVNGFVNLFPVLGAIIADSFLGSFQVIWISSFISLLGTILLDSTATFDSLRPQRCDIGLSLCKAPS 160 (296)
Q Consensus 81 ~lg~s~~~a~~i~~~~~~~~~~~~l~~G~laDr~iGR~~~i~i~~~l~~ig~~~la~~~~~p~~~~~~c~~~~~~~~~~~ 160 (296)
+++++..+.+.+.+.+..+..++.+++|+++|| +|||+++.++.++..++.++......
T Consensus 70 ~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr-~g~r~~l~~~~~~~~~~~~~~~~~~~-------------------- 128 (465)
T TIGR00894 70 NFKWSGALQGLILSSHFYGQIIIQIPVGYLAGK-YVFKWSIGIGMFLSSVISIVIPWAAG-------------------- 128 (465)
T ss_pred CCCCCHHHhhHHHHHHHHHHHHHHcchHHHHHH-hCcchhhHHHHHHHHHHHHHHHHHHH--------------------
Confidence 688999999999999999999999999999999 79999999999888877666543320
Q ss_pred chhhHHHHHHHHHHHHhhchhhhhhhhhhhccCCCccchhhHHHHHHHHHHHHHHHHHHHHHhhhccc-cchhhHHHHHH
Q 045564 161 KVQFAVLYSGIALACLGLGGLRFTLATMGANQFEIPQHQGIFFNWFFILTYASTVISSAAFVYIEDNL-SWRLGSGLNIA 239 (296)
Q Consensus 161 ~~~~~~l~~~~~l~gig~g~~~~~~~~~~ad~f~~~~~r~~~f~~~y~~~~iG~~i~p~v~~~l~~~~-gw~~~F~i~~~ 239 (296)
.+...+++.|++.|++.+...+....+++|.+|+ ++|++..++++.+.++|..++|.+.+++.+.. |||+.|++.++
T Consensus 129 -~~~~~l~~~r~~~G~~~~~~~~~~~~~~~~~~~~-~~r~~~~~~~~~~~~~g~~i~~~l~~~l~~~~~gw~~~f~i~~~ 206 (465)
T TIGR00894 129 -GGIALVVFCRVIQGLAQGSVSPATHKIIVKWAPP-KERSRLLGMSTSGFQLGTFIFLPISGWLCESWGGWPMIFYVFGI 206 (465)
T ss_pred -cCchHHHHHHHHHHHhcccchhhHHHHHHhcCCH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCeehhhhhH
Confidence 1235688899999999999999999999999984 47899999999999999999999999999884 99999999887
Q ss_pred HHHHHHH
Q 045564 240 ANLAGVV 246 (296)
Q Consensus 240 ~~~~~~~ 246 (296)
..++..+
T Consensus 207 ~~~~~~~ 213 (465)
T TIGR00894 207 VGCAWSL 213 (465)
T ss_pred HHHHHHH
Confidence 6554443
No 72
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.51 E-value=2.4e-13 Score=129.62 Aligned_cols=155 Identities=15% Similarity=0.024 Sum_probs=124.2
Q ss_pred HHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhcchHHHHHHHHHHHHHHHHHHHhhccccCCCCCccCCC
Q 045564 73 NLMVYMIQEFHITSINSALISNIVNGFVNLFPVLGAIIADSFLGSFQVIWISSFISLLGTILLDSTATFDSLRPQRCDIG 152 (296)
Q Consensus 73 ~l~~yl~~~lg~s~~~a~~i~~~~~~~~~~~~l~~G~laDr~iGR~~~i~i~~~l~~ig~~~la~~~~~p~~~~~~c~~~ 152 (296)
.++.+ .++++.+..+.+++.+.+.+...++.++.|+++|| +|||+.+.++.++..++.+.+++..+.+.
T Consensus 39 ~~~~~-~~~~~~s~~~~g~~~~~~~l~~~~~~~~~G~l~dr-~g~~~~l~~~~~~~~~~~~~~~~~~~~~~--------- 107 (417)
T PRK10489 39 AVPVQ-IQMMTGSTLQVGLSVTLTGGAMFIGLMVGGVLADR-YDRKKLILLARGTCGLGFIGLALNAFLPE--------- 107 (417)
T ss_pred HHHHH-HHHHHCCHHHHHHHHHHHHHHHHHHHHhhHHHhhh-cCCceEEEehHHHHHHHHHHHHHHHHcCC---------
Confidence 34444 46678899999999999999999999999999999 79999999888877776665543221100
Q ss_pred CcCcCCCCchhhHHHHHHHHHHHHhhchhhhhhhhhhhccCCCccchhhHHHHHHHHHHHHHHHHHHHHHhhhccccchh
Q 045564 153 LSLCKAPSKVQFAVLYSGIALACLGLGGLRFTLATMGANQFEIPQHQGIFFNWFFILTYASTVISSAAFVYIEDNLSWRL 232 (296)
Q Consensus 153 ~~~~~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~~~ad~f~~~~~r~~~f~~~y~~~~iG~~i~p~v~~~l~~~~gw~~ 232 (296)
.+...+++.+++.|++.+...+...+.+.|.+|+ ++|++..++.++..++|..+||.+++++.+..+|++
T Consensus 108 ---------~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~g~~l~g~l~~~~~~~~ 177 (417)
T PRK10489 108 ---------PSLLAIYLLGLWDGFFGSLGVTALLAATPALVGR-ENLMQAGAITMLTVRLGSVISPALGGLLIAAGGVAW 177 (417)
T ss_pred ---------CcHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCH-HHHHHHHHHHHHHHhHHHHhHHHHHHHHHHHHhhHH
Confidence 1345677888999998888888888999999984 468888999889999999999999999988889999
Q ss_pred hHHHHHHHHHHHHHHH
Q 045564 233 GSGLNIAANLAGVVIF 248 (296)
Q Consensus 233 ~F~i~~~~~~~~~~~~ 248 (296)
.|++.++..++..+..
T Consensus 178 ~~~~~~~~~~~~~~~~ 193 (417)
T PRK10489 178 NYGLAAAGTFITLLPL 193 (417)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 9998877665555443
No 73
>PRK09952 shikimate transporter; Provisional
Probab=99.51 E-value=2.4e-12 Score=124.15 Aligned_cols=180 Identities=16% Similarity=0.049 Sum_probs=126.2
Q ss_pred CCchhHHHHHHHHH--H-hHHHhHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhcchHHHHHHHHHH
Q 045564 51 GGRTALLSRTVTCL--T-LGEGWVANLMVYMIQEFHITSINSALISNIVNGFVNLFPVLGAIIADSFLGSFQVIWISSFI 127 (296)
Q Consensus 51 ~~~~~~~~l~~~~~--~-~~y~~~~~l~~yl~~~lg~s~~~a~~i~~~~~~~~~~~~l~~G~laDr~iGR~~~i~i~~~l 127 (296)
.+++.....+...+ . .+|...++++.|+++.+|++......+..+......++.+++|+++|| +||||++.++.++
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~g~s~~~~~~~~~~~g~~~~i~~~~~g~l~Dr-~grr~~~~~~~~~ 325 (438)
T PRK09952 247 RHPGAFLKIIALRLCELLTMYIVTAFALNYSTQNLGLPRELFLNIGLLVGGLSCLTIPCFAWLADR-FGRRRVYITGALI 325 (438)
T ss_pred HchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCchHHHHHHHHH
Confidence 34554444443344 5 778888899999999999988776666666677778888999999999 7999998887766
Q ss_pred HHHHHHHHHhhccccCCCCCccCCCCcCcCCCCchhhHHHHHHHHHHHHhhchhhhhhhhhhhccCCCccchhhHHHH-H
Q 045564 128 SLLGTILLDSTATFDSLRPQRCDIGLSLCKAPSKVQFAVLYSGIALACLGLGGLRFTLATMGANQFEIPQHQGIFFNW-F 206 (296)
Q Consensus 128 ~~ig~~~la~~~~~p~~~~~~c~~~~~~~~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~~~ad~f~~~~~r~~~f~~-~ 206 (296)
..++.+.+.... .. ......+++..++.+++.+...+..+++.+|.+|. +.|+++.++ +
T Consensus 326 ~~~~~~~~~~~~--~~-----------------~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~e~~p~-~~r~tg~g~~~ 385 (438)
T PRK09952 326 GTLSAFPFFMAL--EA-----------------QSIFWIVFFSIMLANIAHDMVVCVQQPMFTEMFGA-SYRYSGAGVGY 385 (438)
T ss_pred HHHHHHHHHHHH--Hc-----------------CChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCc-chhHHHHhHHH
Confidence 554433222211 00 01122334445566778787788889999999995 478888888 4
Q ss_pred HHHHHHHHHHHHHHHHhhhccc--cchhhHHHHHHHHHHHHHHHHhC
Q 045564 207 FILTYASTVISSAAFVYIEDNL--SWRLGSGLNIAANLAGVVIFLSG 251 (296)
Q Consensus 207 y~~~~iG~~i~p~v~~~l~~~~--gw~~~F~i~~~~~~~~~~~~~~~ 251 (296)
.++..+|+.++|.+.+++.+.. +|...+.+.+++.+++.+..+..
T Consensus 386 ~~~~~lgg~~~p~i~g~l~~~~~~~~~~~~~~~~~~~~i~~v~~~~~ 432 (438)
T PRK09952 386 QVASVVGGGFTPFIAAALVTYFGGSWHSVAIYLLAGCLISAMTALLM 432 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHc
Confidence 4555689999999999998744 47888877777766666554443
No 74
>PRK09952 shikimate transporter; Provisional
Probab=99.50 E-value=2.8e-12 Score=123.67 Aligned_cols=150 Identities=15% Similarity=0.135 Sum_probs=108.7
Q ss_pred HHHHHHh--CCChhHHHHHH-----HHHHHHHHHHHHHHHHHhhhhcchHHHHHHHHHHHHHHHHHHHhhccccCCCCCc
Q 045564 76 VYMIQEF--HITSINSALIS-----NIVNGFVNLFPVLGAIIADSFLGSFQVIWISSFISLLGTILLDSTATFDSLRPQR 148 (296)
Q Consensus 76 ~yl~~~l--g~s~~~a~~i~-----~~~~~~~~~~~l~~G~laDr~iGR~~~i~i~~~l~~ig~~~la~~~~~p~~~~~~ 148 (296)
.+..+++ +.++.+ +.+. ++..++..++.++.|+++|| +|||+++.++.+++.++.++++++. .+..
T Consensus 47 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~~~G~l~Dr-~Grr~~l~~~~~~~~~~~~~~~~~~---~~~~-- 119 (438)
T PRK09952 47 LVFNREFFPQVSPAM-GTLAAFATFGVGFLFRPLGGVVFGHFGDR-LGRKRMLMLTVWMMGIATALIGLLP---SFST-- 119 (438)
T ss_pred HHHHHhcCCCCCcHH-HHHHHHHHHHHHHHHHhhHHHHHHHHHHh-hccHHHHHHHHHHHHHHHHHHhcCC---cHHH--
Confidence 3555555 666664 3332 23334566778888999999 7999999999999999888776653 1100
Q ss_pred cCCCCcCcCCCCchhhHHHHHHHHHHHHhhchhhhhhhhhhhccCCCccchhhHHHHHHHHHHHHHHHHHHHHHhhh---
Q 045564 149 CDIGLSLCKAPSKVQFAVLYSGIALACLGLGGLRFTLATMGANQFEIPQHQGIFFNWFFILTYASTVISSAAFVYIE--- 225 (296)
Q Consensus 149 c~~~~~~~~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~~~ad~f~~~~~r~~~f~~~y~~~~iG~~i~p~v~~~l~--- 225 (296)
........+++.|++.|++.|+..+....++.|.+|++ +|+...+....+..+|..++..+..++.
T Consensus 120 ----------~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~-~rg~~~~~~~~g~~~G~~l~~~~~~~l~~~~ 188 (438)
T PRK09952 120 ----------IGWWAPVLLVTLRAIQGFAVGGEWGGAALLAVESAPKN-KKAFYSSGVQVGYGVGLLLSTGLVSLISMMT 188 (438)
T ss_pred ----------HHHHHHHHHHHHHHHHHhhhcccHHHHHHHHHHhCCCC-CCcHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 00001235778899999999999999999999999954 6788777778888888888877666654
Q ss_pred -----ccccchhhHHHHHHHHHH
Q 045564 226 -----DNLSWRLGSGLNIAANLA 243 (296)
Q Consensus 226 -----~~~gw~~~F~i~~~~~~~ 243 (296)
+.+|||+.|++.++..++
T Consensus 189 ~~~~~~~~gWr~~f~~~~~~~l~ 211 (438)
T PRK09952 189 TDEQFLSWGWRIPFLFSIVLVLI 211 (438)
T ss_pred CHHHhhccChHHHHHHHHHHHHH
Confidence 257999999988775544
No 75
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.50 E-value=1.2e-12 Score=121.04 Aligned_cols=152 Identities=12% Similarity=0.094 Sum_probs=121.0
Q ss_pred hHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhcchHHHHHHHHHHHHHHHHHHHhhccccCCCCCcc
Q 045564 70 WVANLMVYMIQEFHITSINSALISNIVNGFVNLFPVLGAIIADSFLGSFQVIWISSFISLLGTILLDSTATFDSLRPQRC 149 (296)
Q Consensus 70 ~~~~l~~yl~~~lg~s~~~a~~i~~~~~~~~~~~~l~~G~laDr~iGR~~~i~i~~~l~~ig~~~la~~~~~p~~~~~~c 149 (296)
...+.+.|. +++|.+..+++.+.+...++..++.+++|+++|| +|||+.+.++.++..++.+++.... .
T Consensus 224 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr-~g~~~~~~~~~~~~~~~~~~~~~~~---~------ 292 (377)
T TIGR00890 224 LIGLYKPYG-QSLGLSDGFLVLAVSISSIFNGGGRPFLGALSDK-IGRQKTMSIVFGISAVGMAAMLFIP---M------ 292 (377)
T ss_pred HHHHHHHHH-HHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhhhhhhhHHHHHHHHHHHHHHHcc---c------
Confidence 344555564 5689998888999999999999999999999999 7999999998888877766554321 1
Q ss_pred CCCCcCcCCCCchhhHHHHHHHHHHHHhhchhhhhhhhhhhccCCCccchhhHHHHHHHHHHHHHHHHHHHHHhhhcccc
Q 045564 150 DIGLSLCKAPSKVQFAVLYSGIALACLGLGGLRFTLATMGANQFEIPQHQGIFFNWFFILTYASTVISSAAFVYIEDNLS 229 (296)
Q Consensus 150 ~~~~~~~~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~~~ad~f~~~~~r~~~f~~~y~~~~iG~~i~p~v~~~l~~~~g 229 (296)
.....+++..++.+++.+...+..+++..|.+|++ +|++.+++++...++|..++|.+.+++.+..|
T Consensus 293 ------------~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~-~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~g 359 (377)
T TIGR00890 293 ------------LNDVLFLATVALVFFTWGGTISLFPSLVSDIFGPA-NSAANYGFLYTAKAVAGIFGGLIASHALTEIG 359 (377)
T ss_pred ------------chhHHHHHHHHHHHHHhccchhccHHHHHHHhhhh-hhhhHhHHHHHHHHHHHHHHHHHHHHHHhhhc
Confidence 01123444556777777777778888999999844 78999999999999999999999999999999
Q ss_pred chhhHHHHHHHHHHHH
Q 045564 230 WRLGSGLNIAANLAGV 245 (296)
Q Consensus 230 w~~~F~i~~~~~~~~~ 245 (296)
|++.|.+.+++.++++
T Consensus 360 ~~~~f~~~~~~~~~~~ 375 (377)
T TIGR00890 360 FEYTFIVTGAFALTSL 375 (377)
T ss_pred hhhHHHHHHHHHHHhc
Confidence 9999998887666544
No 76
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=99.50 E-value=5.2e-13 Score=132.67 Aligned_cols=158 Identities=15% Similarity=0.091 Sum_probs=122.2
Q ss_pred HHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhcchHHHHHHHHHHHHHHHHHHHhhccccCCCCCccCC
Q 045564 72 ANLMVYMIQEFHITSINSALISNIVNGFVNLFPVLGAIIADSFLGSFQVIWISSFISLLGTILLDSTATFDSLRPQRCDI 151 (296)
Q Consensus 72 ~~l~~yl~~~lg~s~~~a~~i~~~~~~~~~~~~l~~G~laDr~iGR~~~i~i~~~l~~ig~~~la~~~~~p~~~~~~c~~ 151 (296)
+....++..++|-+ ....|+.+.+.+...++.++.|.+||. ||||..++.+.++..+|.++.+-+.
T Consensus 64 a~~l~~I~~diG~~-~~~~w~~~~~~l~~av~~~~~G~LSDl-fGRr~~~i~g~~l~vvG~Iv~atA~------------ 129 (599)
T PF06609_consen 64 ASILPYINADIGGS-DNWSWFSTAWTLASAVSFPFVGRLSDL-FGRRYFFIIGSLLGVVGSIVCATAQ------------ 129 (599)
T ss_pred HHHHHHHHHhcCCC-ccchHHHHHHHHHHHHHHHhhHHHHHH-hcchHHHHHHHHHHHhHHHHhhcCC------------
Confidence 45567888899875 555778888999999999999999999 7999999999999999999877542
Q ss_pred CCcCcCCCCchhhHHHHHHHHHHHHhhchhhhhhhhhhhccCCCccchhhHHHHHHHHHHHHHHHHHHHHHhhhccccch
Q 045564 152 GLSLCKAPSKVQFAVLYSGIALACLGLGGLRFTLATMGANQFEIPQHQGIFFNWFFILTYASTVISSAAFVYIEDNLSWR 231 (296)
Q Consensus 152 ~~~~~~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~~~ad~f~~~~~r~~~f~~~y~~~~iG~~i~p~v~~~l~~~~gw~ 231 (296)
+...++++..+.|+|.|... .....++|+.|.+ .|..++.+.....-+...++|.++..+..+.+||
T Consensus 130 -----------~~~~~iag~~l~GvgaG~~~-~~~~~isEl~p~k-~R~~~~~~~~~~~i~~~~~~~~ia~~~~~~~~WR 196 (599)
T PF06609_consen 130 -----------NMNTFIAGMVLYGVGAGVQE-LAALAISELVPNK-WRGLGLAIASIPFIITTWISPLIAQLFAAHSGWR 196 (599)
T ss_pred -----------cHHHHHHHHHHHHHhhHHHH-HHHHHHHHhcccc-hhhhHhHHHHHHHHhhhcccHHHHHHhccCCCcc
Confidence 45689999999999987665 4566689999954 6766666655554455556777777776667999
Q ss_pred hhHHHHHHHHHHHHHHH--HhCCCchh
Q 045564 232 LGSGLNIAANLAGVVIF--LSGKHFYF 256 (296)
Q Consensus 232 ~~F~i~~~~~~~~~~~~--~~~~~~~~ 256 (296)
|.|++..+...++++.. +...|++.
T Consensus 197 w~~~~~~i~~~i~~vl~~~fY~PP~~~ 223 (599)
T PF06609_consen 197 WIFYIFIIWSGIALVLIFFFYFPPPRA 223 (599)
T ss_pred hHHHHHHHHHHHHHHHHHHHhCCCchh
Confidence 99999988766665442 33444443
No 77
>TIGR00898 2A0119 cation transport protein.
Probab=99.50 E-value=3.9e-13 Score=131.24 Aligned_cols=151 Identities=13% Similarity=0.189 Sum_probs=124.7
Q ss_pred HHHHHhCCC---hhHHHHHHHHHHHHHHHHHHHHHHHhhhhcchHHHHHHHHHHHHHHHHHHHhhccccCCCCCccCCCC
Q 045564 77 YMIQEFHIT---SINSALISNIVNGFVNLFPVLGAIIADSFLGSFQVIWISSFISLLGTILLDSTATFDSLRPQRCDIGL 153 (296)
Q Consensus 77 yl~~~lg~s---~~~a~~i~~~~~~~~~~~~l~~G~laDr~iGR~~~i~i~~~l~~ig~~~la~~~~~p~~~~~~c~~~~ 153 (296)
-+.++++++ ..+.+++.+++.++..++.++.|+++|| +|||+++.++.++..++.++.+++.
T Consensus 114 ~i~~e~~l~c~~~~~~~~~~s~~~~g~~~g~~~~g~l~Dr-~Grr~~~~~~~~~~~i~~~~~~~~~-------------- 178 (505)
T TIGR00898 114 TIVTEWDLVCEDAWKVDLTQSCFFVGVLLGSFVFGYLSDR-FGRKKVLLLSTLVTAVSGVLTAFSP-------------- 178 (505)
T ss_pred cEEEEecceechHHHHHHHHHHHHHHHHHHHHhHHHhhhh-ccchHHHHHHHHHHHHHHHHHHHcc--------------
Confidence 456789998 8899999999999999999999999999 7999999999998888777665442
Q ss_pred cCcCCCCchhhHHHHHHHHHHHHhhchhhhhhhhhhhccCCCccchhhHHHHHHHHHHHHHHHHHHHHHhhhccccchhh
Q 045564 154 SLCKAPSKVQFAVLYSGIALACLGLGGLRFTLATMGANQFEIPQHQGIFFNWFFILTYASTVISSAAFVYIEDNLSWRLG 233 (296)
Q Consensus 154 ~~~~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~~~ad~f~~~~~r~~~f~~~y~~~~iG~~i~p~v~~~l~~~~gw~~~ 233 (296)
+...+++.|++.|++.++..+...+++.|.+|++ +|+...+++.++..+|.+++|.++..+.+ ||+.
T Consensus 179 ---------~~~~~~~~r~l~G~~~~~~~~~~~~~~~e~~~~~-~r~~~~~~~~~~~~~g~~~~~~~~~~~~~---wr~~ 245 (505)
T TIGR00898 179 ---------NYTVFLVFRLLVGMGIGGIWVQAVVLNTEFLPKK-QRAIVGTLIQVFFSLGLVLLPLVAYFIPD---WRWL 245 (505)
T ss_pred ---------cHHHHHHHHHHHHhhccchHHHHHHHhheecChh-hhHHHHHHHHHHHHHHHHHHHHHHHHhhH---HHHH
Confidence 3567889999999999999999999999999844 68888888888888999999988766653 9999
Q ss_pred HHHHHHHHHHHHHHH--HhCCCch
Q 045564 234 SGLNIAANLAGVVIF--LSGKHFY 255 (296)
Q Consensus 234 F~i~~~~~~~~~~~~--~~~~~~~ 255 (296)
|++.++..++..+.. +.++|++
T Consensus 246 ~~~~~i~~~~~~~~~~~~~esp~~ 269 (505)
T TIGR00898 246 QLAVSLPTFLFFLLSWFVPESPRW 269 (505)
T ss_pred HHHHHHHHHHHHHHHHhcCCChHH
Confidence 998877655544433 3445555
No 78
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=99.50 E-value=2.3e-12 Score=125.19 Aligned_cols=161 Identities=10% Similarity=-0.000 Sum_probs=118.1
Q ss_pred hHHHhHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhcchHHHHHHHHHHHHHHHHHHHhhccccCCC
Q 045564 66 LGEGWVANLMVYMIQEFHITSINSALISNIVNGFVNLFPVLGAIIADSFLGSFQVIWISSFISLLGTILLDSTATFDSLR 145 (296)
Q Consensus 66 ~~y~~~~~l~~yl~~~lg~s~~~a~~i~~~~~~~~~~~~l~~G~laDr~iGR~~~i~i~~~l~~ig~~~la~~~~~p~~~ 145 (296)
.+++...++|.|+++.+|++..+++.......++..++.+++|+++|| +|||+.+.....+..++..++.+.. .
T Consensus 273 ~~~~~~~~~p~yl~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr-~g~r~~~~~~~~~~~~~~~~~~~~~--~--- 346 (467)
T PRK09556 273 VRIGIDNWSPVYAFQELGFSKEDAINTFTLFEIGALVGSLLWGWLSDL-ANGRRALVACIALALIIFTLGVYQH--A--- 346 (467)
T ss_pred HHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HCCCchHHHHHHHHHHHHHHHHHHh--c---
Confidence 666778899999999999999999999999999999999999999999 7999877665444433322222111 0
Q ss_pred CCccCCCCcCcCCCCchhhHHHHHHHHHHHHhhchhhhhhhhhhhccCCCccchhhHHHHHHHHHHH-HHHHHHHHHHhh
Q 045564 146 PQRCDIGLSLCKAPSKVQFAVLYSGIALACLGLGGLRFTLATMGANQFEIPQHQGIFFNWFFILTYA-STVISSAAFVYI 224 (296)
Q Consensus 146 ~~~c~~~~~~~~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~~~ad~f~~~~~r~~~f~~~y~~~~i-G~~i~p~v~~~l 224 (296)
.+....++.+++.|+...+..........|.+|+ +.|+++.++.+...++ |+.++|.+.|++
T Consensus 347 ----------------~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~p~-~~~g~a~gi~~~~g~l~g~~~~~~~~G~i 409 (467)
T PRK09556 347 ----------------TSEYMYLASLFALGFLVFGPQLLIGVAAVGFVPK-KAIGVANGIKGTFAYLFGDSFAKVGLGMI 409 (467)
T ss_pred ----------------CcHHHHHHHHHHHHHHHhhHHHHHHHHHHhhcch-hhHHHHHHHHHHHHHHHhHHHHhhhHHHH
Confidence 1123344555566654333333344566799984 4789999998888886 778999999999
Q ss_pred hc------------cccchhhHHHHHHHHHHHHHHHH
Q 045564 225 ED------------NLSWRLGSGLNIAANLAGVVIFL 249 (296)
Q Consensus 225 ~~------------~~gw~~~F~i~~~~~~~~~~~~~ 249 (296)
.+ ..||+..|++..++.+++++..+
T Consensus 410 ~~~~~~g~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~ 446 (467)
T PRK09556 410 ADPTKNGTPIFGYTLTGWAGTFAALDIAAIGCICLMA 446 (467)
T ss_pred hcccccccccccccccChHHHHHHHHHHHHHHHHHHH
Confidence 99 57899999988777777665543
No 79
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=99.49 E-value=2e-12 Score=127.38 Aligned_cols=162 Identities=15% Similarity=0.299 Sum_probs=127.4
Q ss_pred HhHHHHHHHHHHHh-----CCCh--hHHHHHHHHHHHHHHHHHHHHHHHhhhhcchHHHHHHHHHHHHHHHHHHHhhccc
Q 045564 69 GWVANLMVYMIQEF-----HITS--INSALISNIVNGFVNLFPVLGAIIADSFLGSFQVIWISSFISLLGTILLDSTATF 141 (296)
Q Consensus 69 ~~~~~l~~yl~~~l-----g~s~--~~a~~i~~~~~~~~~~~~l~~G~laDr~iGR~~~i~i~~~l~~ig~~~la~~~~~ 141 (296)
+..+.+...+.+.. ..+. .+.+++.+++.++..++.++.|+++|+ +|||++++++.+++.+|.++.+.+.
T Consensus 64 g~~s~~~~~~~~~~~~~~~~~~~~~~~~s~~~s~~~lga~~g~l~~g~l~d~-~GRk~~l~~~~~~~~iG~ii~~~a~-- 140 (513)
T KOG0254|consen 64 GGISGALDFLQRFASLYDLSTGEYSVRQGLLTSILNLGALVGSLLAGRLGDR-IGRKKTLLLAVVLFLIGAIIIALAP-- 140 (513)
T ss_pred ccchhhHHHHHhcccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hhhHHHHHHHHHHHHHHHHHHHHhh--
Confidence 45555555555432 2222 344799999999999999999999999 7999999999999999999988763
Q ss_pred cCCCCCccCCCCcCcCCCCchhhHHHHHHHHHHHHhhchhhhhhhhhhhccCCCccchhhHHHHHHHHHHHHHHHHHHHH
Q 045564 142 DSLRPQRCDIGLSLCKAPSKVQFAVLYSGIALACLGLGGLRFTLATMGANQFEIPQHQGIFFNWFFILTYASTVISSAAF 221 (296)
Q Consensus 142 p~~~~~~c~~~~~~~~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~~~ad~f~~~~~r~~~f~~~y~~~~iG~~i~p~v~ 221 (296)
+...++++|++.|+|.|+.....+.+++|.-|. +.|+...+.+....++|..++. +.
T Consensus 141 ---------------------~~~~l~~GR~l~G~g~G~~~~~~piy~sEiap~-~~RG~l~~~~~l~~~~Gi~~~~-~~ 197 (513)
T KOG0254|consen 141 ---------------------SWYQLIVGRILTGLGVGGASVLAPVYISEIAPA-HIRGTLVSLYQLFITIGILLGY-CI 197 (513)
T ss_pred ---------------------hHHHHHHHHHHhccchhhhhhcchhhHhhcCCh-hhhHHHHHHHHHHHHHHHHHHH-HH
Confidence 467899999999999999999999999999984 4799999999999999998884 45
Q ss_pred Hhhhcc--ccchhhHHHHHHHHHHHH--HHHHhCCCchh
Q 045564 222 VYIEDN--LSWRLGSGLNIAANLAGV--VIFLSGKHFYF 256 (296)
Q Consensus 222 ~~l~~~--~gw~~~F~i~~~~~~~~~--~~~~~~~~~~~ 256 (296)
++..++ .+||..+++..+..++.. +.+.+++|+|.
T Consensus 198 ~~~~~~~~~~Wr~~~~~~~i~~~~~~~~~~~~pesp~~L 236 (513)
T KOG0254|consen 198 NYGTSKVYAGWRIPLGLALIPAVILALGMLFLPESPRWL 236 (513)
T ss_pred hhhhccCCccHHHHHHHHHHHHHHHHHHHHhCCCChHHH
Confidence 555444 489988887666433322 33455788886
No 80
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.49 E-value=4.6e-12 Score=118.02 Aligned_cols=156 Identities=12% Similarity=0.081 Sum_probs=121.9
Q ss_pred HHhHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhcchHHHHHHHHHHHHHHHHHHHhhccccCCCCC
Q 045564 68 EGWVANLMVYMIQEFHITSINSALISNIVNGFVNLFPVLGAIIADSFLGSFQVIWISSFISLLGTILLDSTATFDSLRPQ 147 (296)
Q Consensus 68 y~~~~~l~~yl~~~lg~s~~~a~~i~~~~~~~~~~~~l~~G~laDr~iGR~~~i~i~~~l~~ig~~~la~~~~~p~~~~~ 147 (296)
.....+++.|+.+++|.+..+++.+.....+....+.+++|+++|| +|||+++.++.++..++.+.+...
T Consensus 216 ~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~r-~g~~~~~~~~~~~~~~~~~~~~~~--------- 285 (375)
T TIGR00899 216 ILYIINMPLLIIHELGLPDKLAGLMMGTAAGLEIPFMLLAGYLIKR-FGKRRLMLLAALAGVAFYTGLAAD--------- 285 (375)
T ss_pred HHHHhhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHH-hcchhHHHHHHHHHHHHHHHHHHH---------
Confidence 3345567889999999999999888877777778888999999999 799999888776655443332221
Q ss_pred ccCCCCcCcCCCCchhhHHHHHHHHHHHHhhchhhhhhhhhhhccCCCccchhhHHHHHHHHHHHHHHHHHHHHHhhhcc
Q 045564 148 RCDIGLSLCKAPSKVQFAVLYSGIALACLGLGGLRFTLATMGANQFEIPQHQGIFFNWFFILTYASTVISSAAFVYIEDN 227 (296)
Q Consensus 148 ~c~~~~~~~~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~~~ad~f~~~~~r~~~f~~~y~~~~iG~~i~p~v~~~l~~~ 227 (296)
.+.+.+++.+++.+++.|...+....+..|.+|+ +++++.++++...++|..++|.+.|++.+.
T Consensus 286 --------------~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~g~~~g~~~~g~~~~~ 349 (375)
T TIGR00899 286 --------------NSLWALLMLQLLNAIFIGILAGIGMLYFQDLMPG--RAGAATTLYTNTGRVGWIIAGSVGGILAER 349 (375)
T ss_pred --------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcc--hhhHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 1234455566777888887778888888898884 356889999999999999999999999998
Q ss_pred ccchhhHHHHHHHHHHHHHHHH
Q 045564 228 LSWRLGSGLNIAANLAGVVIFL 249 (296)
Q Consensus 228 ~gw~~~F~i~~~~~~~~~~~~~ 249 (296)
.||+..|++.+++.+++.++..
T Consensus 350 ~g~~~~~~~~~~~~~~~~~~~~ 371 (375)
T TIGR00899 350 WSYHAVYWFAIVMLIVALFCLL 371 (375)
T ss_pred ccchhHHHHHHHHHHHHHHHHh
Confidence 9999999998887777666543
No 81
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=99.48 E-value=2.7e-13 Score=127.79 Aligned_cols=152 Identities=9% Similarity=0.072 Sum_probs=132.7
Q ss_pred HHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhcchHHHHHHHHHHHHHHHHHHHhhccccCCCCCccCCC
Q 045564 73 NLMVYMIQEFHITSINSALISNIVNGFVNLFPVLGAIIADSFLGSFQVIWISSFISLLGTILLDSTATFDSLRPQRCDIG 152 (296)
Q Consensus 73 ~l~~yl~~~lg~s~~~a~~i~~~~~~~~~~~~l~~G~laDr~iGR~~~i~i~~~l~~ig~~~la~~~~~p~~~~~~c~~~ 152 (296)
...+++.++.++|.+|.+.+.+.+.+.+.++-.+.|.++|| .+.|+.+.+++++..+..+++.++.
T Consensus 50 ~a~p~l~e~~~lsk~~lG~i~s~f~i~YG~sKf~~G~~sDr-~npr~fm~~gLilsai~nil~Gfs~------------- 115 (448)
T COG2271 50 LAMPALIEDGGLSKTQLGILGSAFSITYGVSKFVMGVLSDR-SNPRYFMAFGLILSAIVNILFGFSP------------- 115 (448)
T ss_pred hccHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHhhhhccc-CCCceeehHHHHHHHHHHHHHhhhh-------------
Confidence 34568888999999999999999999999999999999999 7999999999999988777766543
Q ss_pred CcCcCCCCchhhHHHHHHHHHHHHhhchhhhhhhhhhhccCCCccchhhHHHHHHHHHHHHHHHHHHHH--Hhhhccccc
Q 045564 153 LSLCKAPSKVQFAVLYSGIALACLGLGGLRFTLATMGANQFEIPQHQGIFFNWFFILTYASTVISSAAF--VYIEDNLSW 230 (296)
Q Consensus 153 ~~~~~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~~~ad~f~~~~~r~~~f~~~y~~~~iG~~i~p~v~--~~l~~~~gw 230 (296)
++..+.+..++.|...|.-.|++...++..|| +++|++..++++.+.|+|+.+.|++. +++..+.+|
T Consensus 116 ----------s~~~~~~l~~lng~fQg~Gwpp~~~~i~~Wfs-r~eRG~~~siWn~shNiGGal~~~~~~la~~~~~~~w 184 (448)
T COG2271 116 ----------SLFLFAVLWVLNGWFQGMGWPPCARTITHWFS-RKERGTWWSIWNTSHNIGGALAPLVALLAFFAFHGGW 184 (448)
T ss_pred ----------HHHHHHHHHHHHHHHhcCCCcHHHHHHHHHcC-ccccCceEEEehhhhhcccchHHHHHHHHHHHhccch
Confidence 45677788889999999999999999999999 55799999999999999999999998 999988899
Q ss_pred hhhHHHHHHHHHH-HHHHHH
Q 045564 231 RLGSGLNIAANLA-GVVIFL 249 (296)
Q Consensus 231 ~~~F~i~~~~~~~-~~~~~~ 249 (296)
|.+|++++++.++ +++.+.
T Consensus 185 ~~~f~~pgiiaiival~~~~ 204 (448)
T COG2271 185 RAAFYFPGIIAIIVALILLF 204 (448)
T ss_pred hHHHHHHHHHHHHHHHHHHH
Confidence 9999999985544 444443
No 82
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.48 E-value=5.2e-12 Score=115.27 Aligned_cols=158 Identities=18% Similarity=0.193 Sum_probs=135.3
Q ss_pred hHHHhHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhcchHH-HHHHHHHHHHHHHHHHHhhccccCC
Q 045564 66 LGEGWVANLMVYMIQEFHITSINSALISNIVNGFVNLFPVLGAIIADSFLGSFQ-VIWISSFISLLGTILLDSTATFDSL 144 (296)
Q Consensus 66 ~~y~~~~~l~~yl~~~lg~s~~~a~~i~~~~~~~~~~~~l~~G~laDr~iGR~~-~i~i~~~l~~ig~~~la~~~~~p~~ 144 (296)
.......+.+.|+.+.+|.+..+.+........+..++.++.|+++|| +|||+ .+.++.++..++.+.+....
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~~~~~~~~~----- 263 (352)
T cd06174 190 GYYGLLTYLPLYLQEVLGLSAAEAGLLLSLFGLGGILGALLGGLLSDR-LGRRRLLLLIGLLLAALGLLLLALAP----- 263 (352)
T ss_pred HHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHhhhHHHHHHHHHHHHHHHHHHHhc-----
Confidence 444456677788887789999999999999999999999999999999 79999 99999888888777665432
Q ss_pred CCCccCCCCcCcCCCCchhhHHHHHHHHHHHHhhchhhhhhhhhhhccCCCccchhhHHHHHHHHHHHHHHHHHHHHHhh
Q 045564 145 RPQRCDIGLSLCKAPSKVQFAVLYSGIALACLGLGGLRFTLATMGANQFEIPQHQGIFFNWFFILTYASTVISSAAFVYI 224 (296)
Q Consensus 145 ~~~~c~~~~~~~~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~~~ad~f~~~~~r~~~f~~~y~~~~iG~~i~p~v~~~l 224 (296)
+....++..++.+++.+...+...++..|..|+ +.|++.++.++...++|..++|.+.+++
T Consensus 264 ------------------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~~~i~g~l 324 (352)
T cd06174 264 ------------------SLALLLVALLLLGFGLGFAFPALLTLASELAPP-EARGTASGLFNTFGSLGGALGPLLAGLL 324 (352)
T ss_pred ------------------cHHHHHHHHHHHHHHHhccchhHHHHHHhhcCH-HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 234567778899999999999999999999985 4789999999999999999999999999
Q ss_pred hccccchhhHHHHHHHHHHHHHHH
Q 045564 225 EDNLSWRLGSGLNIAANLAGVVIF 248 (296)
Q Consensus 225 ~~~~gw~~~F~i~~~~~~~~~~~~ 248 (296)
.+..+|++.|.+.+++.+++.++.
T Consensus 325 ~~~~~~~~~~~~~~~~~~i~~i~~ 348 (352)
T cd06174 325 LDTGGYGGVFLILAALALLAALLL 348 (352)
T ss_pred hcccCcchHHHHHHHHHHHHHHHh
Confidence 988999999999988877766554
No 83
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=99.47 E-value=9.9e-13 Score=129.32 Aligned_cols=150 Identities=14% Similarity=0.049 Sum_probs=128.3
Q ss_pred HHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhcchHHHHHHHHHHHHHHHHHHHhhccccCCCCCccCCCCcCcCC
Q 045564 79 IQEFHITSINSALISNIVNGFVNLFPVLGAIIADSFLGSFQVIWISSFISLLGTILLDSTATFDSLRPQRCDIGLSLCKA 158 (296)
Q Consensus 79 ~~~lg~s~~~a~~i~~~~~~~~~~~~l~~G~laDr~iGR~~~i~i~~~l~~ig~~~la~~~~~p~~~~~~c~~~~~~~~~ 158 (296)
.+..+.+........+++.++..+|+++.|++||| +|||++++++.++.+++.++.+++.
T Consensus 110 ~~~~c~~~~~~~~~~s~~~~G~~vG~~i~g~lsD~-~GRk~~~~~~~~~~~i~~~~~a~a~------------------- 169 (521)
T KOG0255|consen 110 WNLVCDSSTLVALGQSLFFLGVLVGSLIFGPLSDR-FGRKPVLLVSLLLFIIFGILTAFAP------------------- 169 (521)
T ss_pred hceeeCcHhHHHHHHHHHHHHHHHHHhhheehHhh-cccHHHHHHHHHHHHHHHHHHHHhC-------------------
Confidence 35667788888999999999999999999999999 8999999999999999887766653
Q ss_pred CCchhhHHHHHHHHHHHHhhchhhhhhhhhhhccCCCccchhhHHHHHHHHHHHHHHHHHHHHHhhhccccchhhHHHHH
Q 045564 159 PSKVQFAVLYSGIALACLGLGGLRFTLATMGANQFEIPQHQGIFFNWFFILTYASTVISSAAFVYIEDNLSWRLGSGLNI 238 (296)
Q Consensus 159 ~~~~~~~~l~~~~~l~gig~g~~~~~~~~~~ad~f~~~~~r~~~f~~~y~~~~iG~~i~p~v~~~l~~~~gw~~~F~i~~ 238 (296)
+...+++.|++.|++.++...+...+++|.++++ .|+.+.++ ......++.++|.+++++.. +|||.+++..
T Consensus 170 ----~~~~~~~~Rfl~G~~~~~~~~~~~~~~~E~~~~~-~R~~~~~~-~~~~~~~~~~~~~~~a~~~~--~Wr~~~~~~~ 241 (521)
T KOG0255|consen 170 ----NYWMFLIFRFLSGFFGSGPLTVGFGLVAEIVSPK-QRGLALTL-GGFFFVGGLMLPAGAAYITR--DWRWLFWIIS 241 (521)
T ss_pred ----cHHHHHHHHHHHHhhccchhHHhHhhheeecCcc-hhhHHHHH-HHHHHHHHHHHHHHHHHHHh--hHHHHHHHHH
Confidence 4678999999999999999999999999999844 78888877 67777888899999999987 9999999988
Q ss_pred HHHHHHHHH-HHh-CCCchh
Q 045564 239 AANLAGVVI-FLS-GKHFYF 256 (296)
Q Consensus 239 ~~~~~~~~~-~~~-~~~~~~ 256 (296)
+..++.++. ++. +.|||+
T Consensus 242 ~~~~~~~~~~~l~~Es~rwl 261 (521)
T KOG0255|consen 242 IPSGLFLLLWFLPPESPRWL 261 (521)
T ss_pred HHHHHHHHHHHccCcChHHH
Confidence 876655544 333 677886
No 84
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.46 E-value=1.7e-12 Score=120.75 Aligned_cols=166 Identities=13% Similarity=0.027 Sum_probs=120.7
Q ss_pred HHHHHHHHH--H-hHHHhHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhcchHHHHHHHHHHHHHHH
Q 045564 56 LLSRTVTCL--T-LGEGWVANLMVYMIQEFHITSINSALISNIVNGFVNLFPVLGAIIADSFLGSFQVIWISSFISLLGT 132 (296)
Q Consensus 56 ~~~l~~~~~--~-~~y~~~~~l~~yl~~~lg~s~~~a~~i~~~~~~~~~~~~l~~G~laDr~iGR~~~i~i~~~l~~ig~ 132 (296)
........+ . .++....+++.|+++++|.+..+++.+.....+...++.+++|+++|| +|||+.+.++..+..+..
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr-~g~~~~~~~~~~~~~~~~ 299 (394)
T TIGR00883 221 FLLGLGLVIATTTTFYLITTYLPTYLTQTLGLSANSALLVLMLSLILFFITIPLSGALSDR-IGRRPVLIIFTVLAALLA 299 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHH-hchHHHHHHHHHHHHHHH
Confidence 444443343 5 666777889999999999999999999999999999999999999999 799998876655443322
Q ss_pred HHHHhhccccCCCCCccCCCCcCcCCCCchhhHHHHHHHHHHHHhhchhhhhhhhhhhccCCCccchhhHHHH-HHHHHH
Q 045564 133 ILLDSTATFDSLRPQRCDIGLSLCKAPSKVQFAVLYSGIALACLGLGGLRFTLATMGANQFEIPQHQGIFFNW-FFILTY 211 (296)
Q Consensus 133 ~~la~~~~~p~~~~~~c~~~~~~~~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~~~ad~f~~~~~r~~~f~~-~y~~~~ 211 (296)
+...... .+. .+...+++..++.+++.+...+...+++.|.+|++ .|++++++ +.++..
T Consensus 300 ~~~~~~~-~~~------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~-~~~~~~~~~~~~~~~ 359 (394)
T TIGR00883 300 VPLLMAL-LDS------------------GSFTLFFFLVLGLALIGGMYTGPMGSFLPELFPTE-VRYTGASLAYNLAGA 359 (394)
T ss_pred HHHHHHH-hcC------------------CchHHHHHHHHHHHHHHHHHhhhHHHHHHHhCCcc-ceeeEeeehhHhHHH
Confidence 1111110 000 12344555667778888888889999999999954 67777777 456667
Q ss_pred HHHHHHHHHHHhhhcccc-chhhHHHHHHHHH
Q 045564 212 ASTVISSAAFVYIEDNLS-WRLGSGLNIAANL 242 (296)
Q Consensus 212 iG~~i~p~v~~~l~~~~g-w~~~F~i~~~~~~ 242 (296)
+|..++|.+.|++.+..| |++.++...++.+
T Consensus 360 ~g~~~~p~~~g~l~~~~g~~~~~~~~~~~~~l 391 (394)
T TIGR00883 360 IFGGFAPYIAAALVAMTGDWYAIGYYLAALAL 391 (394)
T ss_pred HHhhHHHHHHHHHHHHcCcchhHHHHHHHHHH
Confidence 888899999999999888 8877666555443
No 85
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.46 E-value=4.5e-12 Score=129.62 Aligned_cols=132 Identities=14% Similarity=0.061 Sum_probs=103.6
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhcchHHHHHHHHHHHHHHHHHHHhhccccCCCCCccCCCCcCcCCCCchhhHHHHHHH
Q 045564 92 ISNIVNGFVNLFPVLGAIIADSFLGSFQVIWISSFISLLGTILLDSTATFDSLRPQRCDIGLSLCKAPSKVQFAVLYSGI 171 (296)
Q Consensus 92 i~~~~~~~~~~~~l~~G~laDr~iGR~~~i~i~~~l~~ig~~~la~~~~~p~~~~~~c~~~~~~~~~~~~~~~~~l~~~~ 171 (296)
...+..++..++.+++|+++|| +|||+++.++.++.+++.+++.+.. +...+++.+
T Consensus 600 ~~~l~~l~~i~G~il~g~L~Dr-~GRr~~l~~~~~lsai~~ll~~~~~-----------------------s~~~ll~~~ 655 (742)
T TIGR01299 600 VNFLGTLAVLPGNIVSALLMDK-IGRLRMLAGSMVLSCISCFFLSFGN-----------------------SESAMIALL 655 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH-hCCHHHHHHHHHHHHHHHHHHHHHc-----------------------cHHHHHHHH
Confidence 3455667888999999999999 7999999999888888776655432 123445556
Q ss_pred HHHHHhhchhhhhhhhhhhccCCCccchhhHHHHHHHHHHHHHHHHHHHHHhhhccccchhhHHHHHHHHHHHHHHHH
Q 045564 172 ALACLGLGGLRFTLATMGANQFEIPQHQGIFFNWFFILTYASTVISSAAFVYIEDNLSWRLGSGLNIAANLAGVVIFL 249 (296)
Q Consensus 172 ~l~gig~g~~~~~~~~~~ad~f~~~~~r~~~f~~~y~~~~iG~~i~p~v~~~l~~~~gw~~~F~i~~~~~~~~~~~~~ 249 (296)
++.+++.++..+...++++|++|++ .|++++++.+...++|+++||++++++.+. +...+|++.+++.+++.++.+
T Consensus 656 ~l~g~~~~~~~~~~~a~~aEl~Pt~-~Rgta~Gi~~~~~rlGaiigp~i~g~L~~~-~~~~pf~i~a~~lll~~ll~~ 731 (742)
T TIGR01299 656 CLFGGLSIAAWNALDVLTVELYPSD-KRATAFGFLNALCKAAAVLGILIFGSFVGI-TKAAPILFASAALACGGLLAL 731 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-hhHHHHHHHHHHHHHHHHHHH
Confidence 6777777778888999999999955 799999999999999999999999988764 456778887776666555443
No 86
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.45 E-value=1e-11 Score=118.02 Aligned_cols=163 Identities=12% Similarity=0.068 Sum_probs=126.3
Q ss_pred H-hHHHhHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhcchHHHHHHHHHHHHHHHHHHHhhccccC
Q 045564 65 T-LGEGWVANLMVYMIQEFHITSINSALISNIVNGFVNLFPVLGAIIADSFLGSFQVIWISSFISLLGTILLDSTATFDS 143 (296)
Q Consensus 65 ~-~~y~~~~~l~~yl~~~lg~s~~~a~~i~~~~~~~~~~~~l~~G~laDr~iGR~~~i~i~~~l~~ig~~~la~~~~~p~ 143 (296)
. .+++...+++.|+.+ .|.+..+++...+.+.++..++.++.|+++|| +|||+.+.++..+..++.+++... |.
T Consensus 218 ~~~~~~~~~~lp~~l~~-~g~s~~~ag~~~~~~~i~~i~g~~~~g~l~~r-~~~~~~~~~~~~l~~~~~~~~~~~---~~ 292 (393)
T PRK09705 218 NGGYASLIAWLPAFYIE-IGASAQYSGSLLALMTLGQAAGALLMPAMARH-QDRRKLLMLALVLQLVGFCGFIWL---PL 292 (393)
T ss_pred HHHHHHHHHHHHHHHHH-cCCChhhhhHHHHHHHHHHHHHHHHHHHHHhh-ccchHHHHHHHHHHHHHHHHHHHc---cc
Confidence 5 777888899999975 89999999999999999999999999999999 799999988877777665544321 11
Q ss_pred CCCCccCCCCcCcCCCCchhhHHHHHHHHHHHHhhchhhhhhhhhhhccCCCccchhhHHHHHHHHHHHHHHHHHHHHHh
Q 045564 144 LRPQRCDIGLSLCKAPSKVQFAVLYSGIALACLGLGGLRFTLATMGANQFEIPQHQGIFFNWFFILTYASTVISSAAFVY 223 (296)
Q Consensus 144 ~~~~~c~~~~~~~~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~~~ad~f~~~~~r~~~f~~~y~~~~iG~~i~p~v~~~ 223 (296)
+..... ..+.+++.+...+.......+.+++++.+++.+++.+...++++.++|.+.|+
T Consensus 293 -------------------~~~~~~--~~l~g~g~g~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~gp~~~G~ 351 (393)
T PRK09705 293 -------------------QLPVLW--AMVCGLGLGGAFPLCLLLALDHSVQPAIAGKLVAFMQGIGFIIAGLAPWFSGV 351 (393)
T ss_pred -------------------hHHHHH--HHHHHHhccchHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 111121 23457777777777777777888645578999999888999999999999999
Q ss_pred hhcccc-chhhHHHHHHHHHHHHHHHHhCCC
Q 045564 224 IEDNLS-WRLGSGLNIAANLAGVVIFLSGKH 253 (296)
Q Consensus 224 l~~~~g-w~~~F~i~~~~~~~~~~~~~~~~~ 253 (296)
+.+..| |...|.+.+++.+++.+..+...|
T Consensus 352 l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 382 (393)
T PRK09705 352 LRSISGNYLMDWAFHALCVVGLMIITLRFAP 382 (393)
T ss_pred HHHHhCCchHHHHHHHHHHHHHHHHHHHhcc
Confidence 999876 788888888777666655544444
No 87
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=99.45 E-value=1.6e-12 Score=103.08 Aligned_cols=132 Identities=15% Similarity=0.147 Sum_probs=108.1
Q ss_pred HHHHHHHHHHHHHHHHHhhhhcchHHHHHHHHHHHHHHHHHHHhhccccCCCCCccCCCCcCcCCCCchhhHHHHHHHHH
Q 045564 94 NIVNGFVNLFPVLGAIIADSFLGSFQVIWISSFISLLGTILLDSTATFDSLRPQRCDIGLSLCKAPSKVQFAVLYSGIAL 173 (296)
Q Consensus 94 ~~~~~~~~~~~l~~G~laDr~iGR~~~i~i~~~l~~ig~~~la~~~~~p~~~~~~c~~~~~~~~~~~~~~~~~l~~~~~l 173 (296)
+.+..+..++.++.|+++|| +|||+.+.++..+..++.+.+.... +...+++.+++
T Consensus 5 ~~~~~~~~~~~~~~g~~~d~-~g~~~~~~~~~~~~~~~~~~~~~~~-----------------------~~~~~~~~~~~ 60 (141)
T TIGR00880 5 AGYALGQLIYSPLSGLLTDR-FGRKPVLLVGLFIFVLSTAMFALSS-----------------------NITVLIIARFL 60 (141)
T ss_pred EeehhHHHHHHhhHHHHHhh-cchhHHHHHHHHHHHHHHHHHHHhc-----------------------cHHHHHHHHHH
Confidence 44566788889999999999 7999999999888887766554321 23566777889
Q ss_pred HHHhhchhhhhhhhhhhccCCCccchhhHHHHHHHHHHHHHHHHHHHHHhhhccccchhhHHHHHHHHHHHHHHHHh
Q 045564 174 ACLGLGGLRFTLATMGANQFEIPQHQGIFFNWFFILTYASTVISSAAFVYIEDNLSWRLGSGLNIAANLAGVVIFLS 250 (296)
Q Consensus 174 ~gig~g~~~~~~~~~~ad~f~~~~~r~~~f~~~y~~~~iG~~i~p~v~~~l~~~~gw~~~F~i~~~~~~~~~~~~~~ 250 (296)
.+++.+...+...++..|.+|++ .|++..++.+...++|..++|.+.+++.+..+|++.|++..+..+++.+....
T Consensus 61 ~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 136 (141)
T TIGR00880 61 QGFGAAFALVAGAALIADIYPPE-ERGVALGLMSAGIALGPLLGPPLGGVLAQFLGWRAPFLFLAILALAAFILLAF 136 (141)
T ss_pred HHHHHHHHHHhHHHHHHHHCChh-hhhHHHHHHHHhHHHHHHHhHHhHHHHhcccchHHHHHHHHHHHHHHHHHHhh
Confidence 99999988999999999999854 78999999999999999999999999998889999999888766665554433
No 88
>PRK03699 putative transporter; Provisional
Probab=99.45 E-value=7.4e-12 Score=118.71 Aligned_cols=156 Identities=10% Similarity=0.015 Sum_probs=121.2
Q ss_pred hHHHhHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhcchHHHHHHHHHHHHHHHHHHHhhccccCCC
Q 045564 66 LGEGWVANLMVYMIQEFHITSINSALISNIVNGFVNLFPVLGAIIADSFLGSFQVIWISSFISLLGTILLDSTATFDSLR 145 (296)
Q Consensus 66 ~~y~~~~~l~~yl~~~lg~s~~~a~~i~~~~~~~~~~~~l~~G~laDr~iGR~~~i~i~~~l~~ig~~~la~~~~~p~~~ 145 (296)
.++++..++|.|+++.+|++..+++.+.+.+.++..++.+++|+++|| +|||+.+.....+..++..++....
T Consensus 220 ~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr-~~~~~~l~~~~~~~~~~~~~~~~~~------ 292 (394)
T PRK03699 220 AQLTFISWVPEYAQKKFGMSLEDAGNLVSNFWMAYMVGMWIFSFIVRF-FDLQRILTVLAGLALVLMYLFVNTD------ 292 (394)
T ss_pred HHHHHHHHHHHHHHHHcCCChHHhhHHHHHHHHHHHHHHHHHHHHHHH-hchhhHHHHHHHHHHHHHHHHHHcC------
Confidence 667778899999999999999999999999999999999999999999 7999998877766555443332211
Q ss_pred CCccCCCCcCcCCCCchhhHHHHHHHHHHHHhhchhhhhhhhhhhccCCCccchhhHHHHHHHHHHHHHHHHHHHHHhhh
Q 045564 146 PQRCDIGLSLCKAPSKVQFAVLYSGIALACLGLGGLRFTLATMGANQFEIPQHQGIFFNWFFILTYASTVISSAAFVYIE 225 (296)
Q Consensus 146 ~~~c~~~~~~~~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~~~ad~f~~~~~r~~~f~~~y~~~~iG~~i~p~v~~~l~ 225 (296)
+.....+..++.|++.+...+...+...+..|++ +....++.+.+.++|+.++|.+.|++.
T Consensus 293 -----------------~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~--~~~~~g~~~~~~~~g~~i~p~~~G~l~ 353 (394)
T PRK03699 293 -----------------DPSHLLYAILGLGFFSSAIYTTIITLGSQQTKVA--SPKLVNFILTCGTIGTMLTFVVTSPIV 353 (394)
T ss_pred -----------------CchHHHHHHHHHHHHHHHHHHHHHHHHHHHccCC--CHHHHHHHHHhhhHHHHHHHHHHHHHH
Confidence 1123344456677777777787777888877633 455677777888999999999999999
Q ss_pred ccccchhhHHHHHHHHHHHHHH
Q 045564 226 DNLSWRLGSGLNIAANLAGVVI 247 (296)
Q Consensus 226 ~~~gw~~~F~i~~~~~~~~~~~ 247 (296)
+..|++..|++..++.+++.+.
T Consensus 354 ~~~g~~~~~~~~~~~~~~~~~~ 375 (394)
T PRK03699 354 AHFGLQAALLTANGLYAVVFVM 375 (394)
T ss_pred HHhCchhhhhhhHHHHHHHHHH
Confidence 9899999998877766665443
No 89
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.44 E-value=6e-12 Score=120.88 Aligned_cols=158 Identities=8% Similarity=0.025 Sum_probs=120.7
Q ss_pred hHHHHHHHHHHHhCCCh--------hHHHHHHHHHHHHHHHHHHHHHHHhhhhcchHHHHHHHHHHHHHHHHHHHhhccc
Q 045564 70 WVANLMVYMIQEFHITS--------INSALISNIVNGFVNLFPVLGAIIADSFLGSFQVIWISSFISLLGTILLDSTATF 141 (296)
Q Consensus 70 ~~~~l~~yl~~~lg~s~--------~~a~~i~~~~~~~~~~~~l~~G~laDr~iGR~~~i~i~~~l~~ig~~~la~~~~~ 141 (296)
...+.+.|+++ .|.++ ...+...++..+...++.++.|+++|| +|||+++.++.++..++..++....
T Consensus 227 ~~~~~~~~~~~-~g~~~~~~~~~~~~~~g~~~~~~~i~~i~~~~~~g~l~dr-~g~r~~l~~~~~~~~v~~~l~~~~~-- 302 (418)
T TIGR00889 227 TNIFGNGFLHE-FGRNPEFADSFVVKNASIWMSLSQFSEIFFILTIPFFLKR-FGIKKVMLLSLVAWALRFGFFAYGD-- 302 (418)
T ss_pred HHHhHHHHHHH-hcccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHH-hCcHHHHHHHHHHHHHHHHHHHHcC--
Confidence 33556677754 45443 556788888888999999999999999 7999999999998887765554421
Q ss_pred cCCCCCccCCCCcCcCCCCchhhHHHHHHHHHHHHhhchhhhhhhhhhhccCCCccchhhHHHHHH-HHHHHHHHHHHHH
Q 045564 142 DSLRPQRCDIGLSLCKAPSKVQFAVLYSGIALACLGLGGLRFTLATMGANQFEIPQHQGIFFNWFF-ILTYASTVISSAA 220 (296)
Q Consensus 142 p~~~~~~c~~~~~~~~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~~~ad~f~~~~~r~~~f~~~y-~~~~iG~~i~p~v 220 (296)
+. ......+++..++.+++.+...+....+++|.+|+ +.|++++++++ +...+|..+||++
T Consensus 303 ~~-----------------~~~~~~l~l~~~l~g~~~~~~~~~~~~~i~~~~p~-~~~g~~~g~~~~~~~~lg~~iGp~l 364 (418)
T TIGR00889 303 PE-----------------YFGYALLFLSMIVYGCAFDFFNISGSVFVEKEVPV-HIRASAQGLFTLMCNGFGSLLGYIL 364 (418)
T ss_pred cc-----------------hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH-HHHHHHHHHHHHHHHhhHHHHHHHH
Confidence 00 01234566778889999888888889999999994 47899999986 5678999999999
Q ss_pred HHhhhcc------ccchhhHHHHHHHHHHHHHHHH
Q 045564 221 FVYIEDN------LSWRLGSGLNIAANLAGVVIFL 249 (296)
Q Consensus 221 ~~~l~~~------~gw~~~F~i~~~~~~~~~~~~~ 249 (296)
.|++.+. +||+..|.+.+++.+++.+++.
T Consensus 365 ~G~l~~~~g~~~~~~~~~~f~~~~~~~~i~~~l~~ 399 (418)
T TIGR00889 365 SGVMVEKMFAYGTFDWQTMWLFFAGYIAILAVLFM 399 (418)
T ss_pred HHHHHHHhccccCCchHHHHHHHHHHHHHHHHHHH
Confidence 9999887 4699999988776655554443
No 90
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.44 E-value=5.6e-12 Score=119.42 Aligned_cols=162 Identities=8% Similarity=-0.032 Sum_probs=116.3
Q ss_pred hHHHhHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhcchHHHHHHHHHHHHHHHHHHHhhccccCCC
Q 045564 66 LGEGWVANLMVYMIQEFHITSINSALISNIVNGFVNLFPVLGAIIADSFLGSFQVIWISSFISLLGTILLDSTATFDSLR 145 (296)
Q Consensus 66 ~~y~~~~~l~~yl~~~lg~s~~~a~~i~~~~~~~~~~~~l~~G~laDr~iGR~~~i~i~~~l~~ig~~~la~~~~~p~~~ 145 (296)
+......+++.|+++++|++..+.+.+.+++.+...++.++.|+++|| +||||.+..+.+...++...+......+...
T Consensus 17 ~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~l~~~i~~~~~G~l~Dr-~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (396)
T TIGR00882 17 IMSAYFPFFPIWLHDVNGLSKTDTGIVFSCISLFSILFQPLFGLISDK-LGLKKHLLWIISGLLVLFAPFFIYVFGPLLQ 95 (396)
T ss_pred HHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCcHHHHHHHHHHHHHHHHHHHHHHhhhHHH
Confidence 445566788999999999999999999999999999999999999999 7999999887766655433222111011000
Q ss_pred CCccCCCCcCcCCCCchhhHHHHHHHHHHHHhhchhhhhhhhhhhccCCCccchhhHHHHHHHHHHHHHHHHHHHHHhhh
Q 045564 146 PQRCDIGLSLCKAPSKVQFAVLYSGIALACLGLGGLRFTLATMGANQFEIPQHQGIFFNWFFILTYASTVISSAAFVYIE 225 (296)
Q Consensus 146 ~~~c~~~~~~~~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~~~ad~f~~~~~r~~~f~~~y~~~~iG~~i~p~v~~~l~ 225 (296)
......+++++++.+++.+...+....+..|.-+ +++..++......++|..++|.+++.+.
T Consensus 96 ---------------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~---~~~~~~g~~~~~~~~g~~~g~~~~g~l~ 157 (396)
T TIGR00882 96 ---------------SNILVGAIVGGLYLGFVFSAGAGAIEAYIEKVSR---NSNFEYGKARMFGCVGWALCASIAGILF 157 (396)
T ss_pred ---------------HHHHHHHHHHHHHHHHHhccchhhHHHHHHHhhh---hcccccchhhhhcccHHHHHHHHHhhhh
Confidence 0012234556677778777777777777666432 2234566667778999999999999886
Q ss_pred ccccchhhHHHHHHHHHHHHHH
Q 045564 226 DNLSWRLGSGLNIAANLAGVVI 247 (296)
Q Consensus 226 ~~~gw~~~F~i~~~~~~~~~~~ 247 (296)
+ .+|++.|++.++..++..++
T Consensus 158 ~-~~~~~~f~~~~~~~~~~~~~ 178 (396)
T TIGR00882 158 S-IDPQIVFWLGSGFALILMLL 178 (396)
T ss_pred c-cCchHHHHHHHHHHHHHHHH
Confidence 5 59999999887765554433
No 91
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.43 E-value=6.6e-12 Score=122.09 Aligned_cols=150 Identities=13% Similarity=0.014 Sum_probs=112.7
Q ss_pred HhHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhcchHHHHHHHHHHHHHHHHHHHhhccccCCCCCc
Q 045564 69 GWVANLMVYMIQEFHITSINSALISNIVNGFVNLFPVLGAIIADSFLGSFQVIWISSFISLLGTILLDSTATFDSLRPQR 148 (296)
Q Consensus 69 ~~~~~l~~yl~~~lg~s~~~a~~i~~~~~~~~~~~~l~~G~laDr~iGR~~~i~i~~~l~~ig~~~la~~~~~p~~~~~~ 148 (296)
+...+++.|+++++|++..+++.+.+...++..++.+++|+++|| +|||+++.++.++..++.+++....
T Consensus 293 ~~~~~lp~~l~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~dr-~g~~~~~~~~~~~~~~~~~~~~~~~--------- 362 (496)
T PRK03893 293 PIQALLPTYLKTDLGYDPHTVANVLFFSGFGAAVGCCVGGFLGDW-LGTRKAYVCSLLISQLLIIPVFAIG--------- 362 (496)
T ss_pred hHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hcchHHHHHHHHHHHHHHHHHhhcc---------
Confidence 355788999988999999999999999999999999999999999 7999998887766554433222111
Q ss_pred cCCCCcCcCCCCchhhHHHHHHHHHHHHhhchhhhhhhhhhhccCCCccchhhHHHHHHHHHHHHHHHHHHHHHhhhccc
Q 045564 149 CDIGLSLCKAPSKVQFAVLYSGIALACLGLGGLRFTLATMGANQFEIPQHQGIFFNWFFILTYASTVISSAAFVYIEDNL 228 (296)
Q Consensus 149 c~~~~~~~~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~~~ad~f~~~~~r~~~f~~~y~~~~iG~~i~p~v~~~l~~~~ 228 (296)
........+..++.+....+..+..++++.|.+|+ +.|++.+++++...++|+.+||++.|++.+.+
T Consensus 363 ------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~g~~lgp~l~g~l~~~~ 429 (496)
T PRK03893 363 ------------GANVWVLGLLLFFQQMLGQGISGLLPKLIGGYFDT-EQRAAGLGFTYNVGALGGALAPILGALIAQRL 429 (496)
T ss_pred ------------ccHHHHHHHHHHHHHHHhcccchhhHHHHHhhCCH-HHhhcccchhhhhhhHHHHHHHHHHHHHhccC
Confidence 01222233333333333333456777888999984 47899999988999999999999999999999
Q ss_pred cchhhHHHHHHHH
Q 045564 229 SWRLGSGLNIAAN 241 (296)
Q Consensus 229 gw~~~F~i~~~~~ 241 (296)
||+..+.+.++..
T Consensus 430 g~~~~~~~~~~~~ 442 (496)
T PRK03893 430 DLGTALASLSFSL 442 (496)
T ss_pred ChHHHHHHHHHHH
Confidence 9988876655433
No 92
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.41 E-value=2.4e-11 Score=112.40 Aligned_cols=164 Identities=9% Similarity=-0.011 Sum_probs=115.1
Q ss_pred hHHHhHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhcchHHH-HHHHHHHHHHHHHHHHhhccccCC
Q 045564 66 LGEGWVANLMVYMIQEFHITSINSALISNIVNGFVNLFPVLGAIIADSFLGSFQV-IWISSFISLLGTILLDSTATFDSL 144 (296)
Q Consensus 66 ~~y~~~~~l~~yl~~~lg~s~~~a~~i~~~~~~~~~~~~l~~G~laDr~iGR~~~-i~i~~~l~~ig~~~la~~~~~p~~ 144 (296)
..+....+++.|+.+.+|.+..+++.+.+...++..++.+++|+++|| +|||+. +........++.+...+.......
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (399)
T TIGR00893 230 GLGFFLTWFPTYLVQERGLSILEAGFMASLPGIVGFIGMILGGRLSDL-LLRRGKSLVFARKTAIIAGLVLSLLMFATNY 308 (399)
T ss_pred HHHHHHHHHHHHHHHHhcccHHHhhHHHHHHHHHHHHHHHHHHHHHHH-HhhcccchhHHHHHHHHHHHHHHHHHHHhcc
Confidence 666677889999999999999999999999999999999999999999 799862 111111111221111111100000
Q ss_pred CCCccCCCCcCcCCCCchhhHHHHHHHHHHHHhhchhhhhhhhhhhccCCCccchhhHHHHHHHHHHHHHHHHHHHHHhh
Q 045564 145 RPQRCDIGLSLCKAPSKVQFAVLYSGIALACLGLGGLRFTLATMGANQFEIPQHQGIFFNWFFILTYASTVISSAAFVYI 224 (296)
Q Consensus 145 ~~~~c~~~~~~~~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~~~ad~f~~~~~r~~~f~~~y~~~~iG~~i~p~v~~~l 224 (296)
... ....+...+.+.+..+..+...++.+|.+|+ +.|++.+++++...++|..++|.+.+++
T Consensus 309 ----------------~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~g~~~~~~i~g~l 370 (399)
T TIGR00893 309 ----------------VNI-PYAALALVALGFFGLGAGAIGWALISDNAPG-NIAGLTGGLINSLGNLGGIVGPIVIGAI 370 (399)
T ss_pred ----------------chh-HHHHHHHHHHHHhchhhhhHHHHHHHhhcCh-hHHHHHHHHHHHHHHHhhhhhhHHhhhh
Confidence 001 1222222333333333788899999999994 4789999999999999999999999999
Q ss_pred hcccc-chhhHHHHHHHHHHHHHHH
Q 045564 225 EDNLS-WRLGSGLNIAANLAGVVIF 248 (296)
Q Consensus 225 ~~~~g-w~~~F~i~~~~~~~~~~~~ 248 (296)
.+..| |++.|++.+++.+++.+..
T Consensus 371 ~~~~g~~~~~~~~~~~~~~~~~~~~ 395 (399)
T TIGR00893 371 AATTGSFAGALMVVAALALIGALSY 395 (399)
T ss_pred ccCCCchhHHHHHHHHHHHHHHHHH
Confidence 99888 9999998887766665544
No 93
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.41 E-value=1.3e-11 Score=131.65 Aligned_cols=134 Identities=11% Similarity=0.035 Sum_probs=108.3
Q ss_pred HHHHHHHHHHhCCChh--HHHHHHHHHHHHHHHHHHHHHHHhhhhcchHHHHHHHHHHHHHHHHHHHhhccccCCCCCcc
Q 045564 72 ANLMVYMIQEFHITSI--NSALISNIVNGFVNLFPVLGAIIADSFLGSFQVIWISSFISLLGTILLDSTATFDSLRPQRC 149 (296)
Q Consensus 72 ~~l~~yl~~~lg~s~~--~a~~i~~~~~~~~~~~~l~~G~laDr~iGR~~~i~i~~~l~~ig~~~la~~~~~p~~~~~~c 149 (296)
..+..++...++.+.. ..+++.+++.+...++++++|+++|| +|||++++++.++.+++.++..++...
T Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~G~l~Dr-~grk~~l~~~~~~~~~~~~~~~~~~~~-------- 100 (1146)
T PRK08633 30 ILIQNTLIKAYDGSEQVILTAIVNALFLLPFLLLSSPAGFLADK-FSKNRVIRIVKLFEVGLTLLIVLAYYL-------- 100 (1146)
T ss_pred HHHHHHHHHHcCcccHHHHHHHHHHHHHHHHHHHhhhHhhhccc-ccHHHHHHHHHHHHHHHHHHHHHHHHH--------
Confidence 3344455556666543 35788899999999999999999999 799999999887776666555443211
Q ss_pred CCCCcCcCCCCchhhHHHHHHHHHHHHhhchhhhhhhhhhhccCCCccchhhHHHHHHHHHHHHHHHHHHHHHhhhcc
Q 045564 150 DIGLSLCKAPSKVQFAVLYSGIALACLGLGGLRFTLATMGANQFEIPQHQGIFFNWFFILTYASTVISSAAFVYIEDN 227 (296)
Q Consensus 150 ~~~~~~~~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~~~ad~f~~~~~r~~~f~~~y~~~~iG~~i~p~v~~~l~~~ 227 (296)
.+...++++|++.|++.+...+...++++|.+|++ +|+.+++++..+.++|.++||.+++++.+.
T Consensus 101 ------------~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~-~r~~~~~~~~~~~~ig~~lg~~l~~~l~~~ 165 (1146)
T PRK08633 101 ------------GWFWLAFAVTFLLGAQSAIYSPAKYGIIPELVGKE-NLSRANGLLEAFTIVAILAGTALFSFLFES 165 (1146)
T ss_pred ------------ccHHHHHHHHHHHHHHHHhhchHHHhhhHHhcCcc-cchhhhhHHHHHHHHHHHHHHHHHHHHHHh
Confidence 13567889999999999999999999999999954 789999999999999999999999998765
No 94
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.41 E-value=2.6e-11 Score=117.32 Aligned_cols=159 Identities=14% Similarity=0.072 Sum_probs=108.6
Q ss_pred hHHHhHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhc--chHHHH-HHHHHHHHHHHHHHHhhcccc
Q 045564 66 LGEGWVANLMVYMIQEFHITSINSALISNIVNGFVNLFPVLGAIIADSFL--GSFQVI-WISSFISLLGTILLDSTATFD 142 (296)
Q Consensus 66 ~~y~~~~~l~~yl~~~lg~s~~~a~~i~~~~~~~~~~~~l~~G~laDr~i--GR~~~i-~i~~~l~~ig~~~la~~~~~p 142 (296)
..++...++|.|++++.|++..+++.+..++.++..++.+++|+++|| + |||+.. .+...+..++.+.+.+. +
T Consensus 268 ~~~~~~~~~P~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~G~l~dr-~~~~r~~~~~~~~~~l~~~~~~~~~~~---~ 343 (452)
T PRK11273 268 LRYGILDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDK-VFRGNRGATGVFFMTLVTIATIVYWLN---P 343 (452)
T ss_pred HHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HccCCcchHHHHHHHHHHHHHHHHHHh---c
Confidence 667778899999999999999999888888888999999999999999 6 455432 22223333332222111 1
Q ss_pred CCCCCccCCCCcCcCCCCchhhHHHHHHHHHHHHhhchhhhhhhhhhhccCCCccchhhHHHHHHHHHHHHHHH-HHHHH
Q 045564 143 SLRPQRCDIGLSLCKAPSKVQFAVLYSGIALACLGLGGLRFTLATMGANQFEIPQHQGIFFNWFFILTYASTVI-SSAAF 221 (296)
Q Consensus 143 ~~~~~~c~~~~~~~~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~~~ad~f~~~~~r~~~f~~~y~~~~iG~~i-~p~v~ 221 (296)
. .+....++..++.+.+..........+..|.+|+ +.|++++++++...++|+.+ +|.+.
T Consensus 344 ~------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~-~~~g~~~g~~~~~~~~g~~~~g~~v~ 404 (452)
T PRK11273 344 A------------------GNPTVDMACMIVIGFLIYGPVMLIGLHALELAPK-KAAGTAAGFTGLFGYLGGSVAASAIV 404 (452)
T ss_pred c------------------cChHHHHHHHHHHHHHHHhHHHHHHHHHHHHcCh-hhhhhHHHHHHHHHHHHHHHhhhhhH
Confidence 0 0112233333444443322233344566788984 47899999988888888654 79999
Q ss_pred HhhhccccchhhHHHHHHHHHHHHHH
Q 045564 222 VYIEDNLSWRLGSGLNIAANLAGVVI 247 (296)
Q Consensus 222 ~~l~~~~gw~~~F~i~~~~~~~~~~~ 247 (296)
|++.+..||+..|++..++.+++++.
T Consensus 405 g~l~~~~g~~~~f~~~~~~~~~~~~~ 430 (452)
T PRK11273 405 GYTVDFFGWDGGFMVMIGGSILAVIL 430 (452)
T ss_pred HHHHHHhcchHHHHHHHHHHHHHHHH
Confidence 99999999999999888766665543
No 95
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=99.40 E-value=7.1e-12 Score=118.35 Aligned_cols=175 Identities=11% Similarity=0.097 Sum_probs=132.1
Q ss_pred hhHHHHHHHHH--H-hHHHhHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhc-chHHHH-HHHHHHH
Q 045564 54 TALLSRTVTCL--T-LGEGWVANLMVYMIQEFHITSINSALISNIVNGFVNLFPVLGAIIADSFL-GSFQVI-WISSFIS 128 (296)
Q Consensus 54 ~~~~~l~~~~~--~-~~y~~~~~l~~yl~~~lg~s~~~a~~i~~~~~~~~~~~~l~~G~laDr~i-GR~~~i-~i~~~l~ 128 (296)
|.++.+.+..+ = ..|++..+.|.|+.+..|+|..++.+..+.+-.+...++++.||+|||++ |||... +++.+..
T Consensus 252 k~iW~la~a~vfvYivR~gi~dW~p~YL~e~k~~s~~~a~~a~~lfE~agl~G~Ll~GwlSDklfkgrR~p~~~i~~~~i 331 (448)
T COG2271 252 KLIWLLALANVFVYVVRYGINDWGPLYLSEVKGFSLVKANWAISLFEVAGLPGTLLAGWLSDKLFKGRRGPMALIFMLLI 331 (448)
T ss_pred hHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhcCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcccccchHHHHHHHHH
Confidence 33455555555 4 88999999999999999999999999999999999999999999999988 777654 3344444
Q ss_pred HHHHHHHHhhccccCCCCCccCCCCcCcCCCCchhhHHHHHHHHHHHHhhchhhhhhhhhhhccCCCccchhhHHHHHHH
Q 045564 129 LLGTILLDSTATFDSLRPQRCDIGLSLCKAPSKVQFAVLYSGIALACLGLGGLRFTLATMGANQFEIPQHQGIFFNWFFI 208 (296)
Q Consensus 129 ~ig~~~la~~~~~p~~~~~~c~~~~~~~~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~~~ad~f~~~~~r~~~f~~~y~ 208 (296)
.++.+.....+ . .+..+..+..+++|+..-+..-.+.....|..|++ .-+++-+.-.+
T Consensus 332 ~~~~~~~w~~~---~------------------~~~~l~~~~l~~iGf~IyGPqmLiGl~a~e~~pK~-AaGtA~Gf~Gl 389 (448)
T COG2271 332 TASLVLYWLAP---N------------------GSYLLDAILLFIIGFLIYGPQMLIGLAAAEFVPKK-AAGTATGFVGL 389 (448)
T ss_pred HHHHHHHHcCC---C------------------ccHHHHHHHHHHHHHHHhhHHHHHHHHHhccccHh-hccchhchhhh
Confidence 44333333221 1 23456666777788777777777788888999843 56777777666
Q ss_pred HHHH-HHHHHHHHHHhhhccccchhhHHHHHHHHHHHHHHHHh
Q 045564 209 LTYA-STVISSAAFVYIEDNLSWRLGSGLNIAANLAGVVIFLS 250 (296)
Q Consensus 209 ~~~i-G~~i~p~v~~~l~~~~gw~~~F~i~~~~~~~~~~~~~~ 250 (296)
...+ |+.++....+++.|.+||..+|.+..+..+++.+++++
T Consensus 390 f~Yl~Ga~~a~~~~g~i~d~~gW~g~Fi~~~~~a~l~~lll~~ 432 (448)
T COG2271 390 FAYLIGAALAGLPLGYIADTWGWDGGFIVLSIAALLAILLLLP 432 (448)
T ss_pred HHHHhhHHhcCCcceeeEecCCCcchHHHHHHHHHHHHHHHHH
Confidence 6777 88899999999999999999999887766666655443
No 96
>PRK15075 citrate-proton symporter; Provisional
Probab=99.40 E-value=2.2e-11 Score=117.10 Aligned_cols=144 Identities=11% Similarity=0.053 Sum_probs=102.0
Q ss_pred hHHHhHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhcchHHHHHHHHHHHHHHHH-HHHhhccccCC
Q 045564 66 LGEGWVANLMVYMIQEFHITSINSALISNIVNGFVNLFPVLGAIIADSFLGSFQVIWISSFISLLGTI-LLDSTATFDSL 144 (296)
Q Consensus 66 ~~y~~~~~l~~yl~~~lg~s~~~a~~i~~~~~~~~~~~~l~~G~laDr~iGR~~~i~i~~~l~~ig~~-~la~~~~~p~~ 144 (296)
.++++..+++.|+++.+|++..+++.......++..++.+++|+++|| +|||+.+.++.++..+... .+.... +.
T Consensus 253 ~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~Dr-~g~r~~~~~~~~~~~~~~~~~~~~~~--~~- 328 (434)
T PRK15075 253 SFYLITVYTPTFGKTVLHLSAADSLLVTLCVGVSNFIWLPIGGALSDR-IGRRPVLIAFTVLAILTAYPALSWLV--AA- 328 (434)
T ss_pred HHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hcchHHHHHHHHHHHHHHHHHHHHHH--cC-
Confidence 677788889999999899999998888888888899999999999999 7999988776544332111 111110 00
Q ss_pred CCCccCCCCcCcCCCCchhhHHHHHHHHHHHHhhchhhhhhhhhhhccCCCccchhhHHHHHH-HHHHHHHHHHHHHHHh
Q 045564 145 RPQRCDIGLSLCKAPSKVQFAVLYSGIALACLGLGGLRFTLATMGANQFEIPQHQGIFFNWFF-ILTYASTVISSAAFVY 223 (296)
Q Consensus 145 ~~~~c~~~~~~~~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~~~ad~f~~~~~r~~~f~~~y-~~~~iG~~i~p~v~~~ 223 (296)
.......+..++.+++.+...+...++..|.+|++ .|++++++.+ ++..+++.++|.+.++
T Consensus 329 -----------------~~~~~~~~~~~~~~~~~g~~~~~~~~~~~e~~p~~-~rg~~~g~~~~~~~~~~g~~~p~~~g~ 390 (434)
T PRK15075 329 -----------------PSFARMLAVELWLSFLYGSYNGAMVVALTEVMPAE-VRTAGFSLAYSLATAIFGGFTPAISTW 390 (434)
T ss_pred -----------------CchHHHHHHHHHHHHHHHHHHhhHHHHHHHHCCCC-ccchheeHHHHHHHHHHhhhHHHHHHH
Confidence 01122333344455666666666778889999954 7899988844 3434457789999999
Q ss_pred hhccccch
Q 045564 224 IEDNLSWR 231 (296)
Q Consensus 224 l~~~~gw~ 231 (296)
+.+..|++
T Consensus 391 i~~~~g~~ 398 (434)
T PRK15075 391 LIHVTGDK 398 (434)
T ss_pred HHHhcCCc
Confidence 99988854
No 97
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.40 E-value=1.3e-11 Score=117.83 Aligned_cols=165 Identities=11% Similarity=0.019 Sum_probs=107.0
Q ss_pred hHHHhHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhcchHHHHHHHHHHHHHHHHHHHhhccccCCC
Q 045564 66 LGEGWVANLMVYMIQEFHITSINSALISNIVNGFVNLFPVLGAIIADSFLGSFQVIWISSFISLLGTILLDSTATFDSLR 145 (296)
Q Consensus 66 ~~y~~~~~l~~yl~~~lg~s~~~a~~i~~~~~~~~~~~~l~~G~laDr~iGR~~~i~i~~~l~~ig~~~la~~~~~p~~~ 145 (296)
+++....+++.|+.+++|++..+.+.+.+++.+...+++++.|+++|| +||||++.++..+..++...+......+.+.
T Consensus 25 ~~~~~~~~~~~~l~~~~g~s~~~~g~~~s~~~l~~~i~~~~~G~l~Dr-~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~ 103 (420)
T PRK09528 25 IWSSWFSFFPIWLHDINGLSGTDTGIIFSANSLFALLFQPLYGLISDK-LGLKKHLLWIISGLLVLFGPFFIYVFAPLLQ 103 (420)
T ss_pred HHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 455567889999999999999999999999999999999999999999 7999999887665554433221111000000
Q ss_pred CCccCCCCcCcCCCCchhhHHHHHHHHHHHHhhchhhhhhhhhhhccCCCccchhhHHHHHHHHHHHHHHHHHHHHHhhh
Q 045564 146 PQRCDIGLSLCKAPSKVQFAVLYSGIALACLGLGGLRFTLATMGANQFEIPQHQGIFFNWFFILTYASTVISSAAFVYIE 225 (296)
Q Consensus 146 ~~~c~~~~~~~~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~~~ad~f~~~~~r~~~f~~~y~~~~iG~~i~p~v~~~l~ 225 (296)
.......+++.++.+.+.....+....+. +.++ + .++..++......++|..++|.+++++.
T Consensus 104 ---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~-~~g~~~g~~~~~~~~g~~i~~~~~g~l~ 165 (420)
T PRK09528 104 ---------------YNILLGAIVGGIYLGFGFLAGAGAIEAYI-ERVS-R-RSGFEYGRARMWGSLGWALCAFIAGILF 165 (420)
T ss_pred ---------------HHHHHHHHHHHHHhhhhhccchhhhhhHH-HHHH-h-hccccchhhHHhhhHHHHHHHHHHHHHH
Confidence 00001112222223332222223333322 2222 2 3455667767778999999999999997
Q ss_pred ccccchhhHHHHHHHHHHHHHHHHh
Q 045564 226 DNLSWRLGSGLNIAANLAGVVIFLS 250 (296)
Q Consensus 226 ~~~gw~~~F~i~~~~~~~~~~~~~~ 250 (296)
+ .+|++.|++.++..++.+++++.
T Consensus 166 ~-~~~~~~f~~~~~~~~~~~~~~~~ 189 (420)
T PRK09528 166 N-INPQINFWLGSGSALILLVLLFF 189 (420)
T ss_pred h-cCchHhHHHHHHHHHHHHHHHhc
Confidence 6 48999999887766555544443
No 98
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.40 E-value=3.1e-11 Score=115.09 Aligned_cols=157 Identities=11% Similarity=-0.042 Sum_probs=124.0
Q ss_pred HHHhHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhcchHHHHHHHHHHHHHHHHHHHhhccccCCCC
Q 045564 67 GEGWVANLMVYMIQEFHITSINSALISNIVNGFVNLFPVLGAIIADSFLGSFQVIWISSFISLLGTILLDSTATFDSLRP 146 (296)
Q Consensus 67 ~y~~~~~l~~yl~~~lg~s~~~a~~i~~~~~~~~~~~~l~~G~laDr~iGR~~~i~i~~~l~~ig~~~la~~~~~p~~~~ 146 (296)
..+...+++.|+.+.+|.+..+.+.+.+...++..++.++.++++|| .++++.+..+.++..++.+++....
T Consensus 239 ~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~~~l~~~-~~~~~~l~~~~~~~~~~~~~~~~~~------- 310 (417)
T PRK10489 239 ASAVRVLYPALADEVWQMGAAQIGLLYAAVPLGAALGALTSGWLAHS-ARPGLLMLLSTLGSFLAVGLFGLMP------- 310 (417)
T ss_pred HHhHHHhhHHHHHhccCCChhHhHHHHHHHHHHHHHHHHHHHHhhhc-cCcchHHHHHHHHHHHHHHHHHccc-------
Confidence 34456678889988899999999999999999999999999999999 6888888888777766655443221
Q ss_pred CccCCCCcCcCCCCchhhHHHHHHHHHHHHhhchhhhhhhhhhhccCCCccchhhHHHHHHHHHHHHHHHHHHHHHhhhc
Q 045564 147 QRCDIGLSLCKAPSKVQFAVLYSGIALACLGLGGLRFTLATMGANQFEIPQHQGIFFNWFFILTYASTVISSAAFVYIED 226 (296)
Q Consensus 147 ~~c~~~~~~~~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~~~ad~f~~~~~r~~~f~~~y~~~~iG~~i~p~v~~~l~~ 226 (296)
+.....++.++.|++.+...+...+++.|.+|+ +.|++.+++++...++|..+||.+.|++.+
T Consensus 311 ----------------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~-~~~g~~~g~~~~~~~~g~~~g~~l~G~l~~ 373 (417)
T PRK10489 311 ----------------MWILAVLCLALFGYLSAISSLLQYTLLQTQTPD-EMLGRINGLWTAQNVTGDAIGAALLGGLGA 373 (417)
T ss_pred ----------------hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCH-HHHHHHHHHHHHHHhhhHhHHHHHHHHHHH
Confidence 233455667777888877777778889999984 478999999999999999999999999999
Q ss_pred cccchhhHHHHHHHHHHHHHHH
Q 045564 227 NLSWRLGSGLNIAANLAGVVIF 248 (296)
Q Consensus 227 ~~gw~~~F~i~~~~~~~~~~~~ 248 (296)
.+|++..+++.+++.++..++.
T Consensus 374 ~~g~~~~~~~~~~~~~~~~~~~ 395 (417)
T PRK10489 374 MMTPVASASASGFGLLIIGVLL 395 (417)
T ss_pred HhchhhHHHHHHHHHHHHHHHH
Confidence 8898888887776554444333
No 99
>PTZ00207 hypothetical protein; Provisional
Probab=99.39 E-value=3.7e-11 Score=119.81 Aligned_cols=170 Identities=16% Similarity=0.105 Sum_probs=124.6
Q ss_pred CCchhHHHHHHHHH-H-hHHHhHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhcchHHHHHHHHHHH
Q 045564 51 GGRTALLSRTVTCL-T-LGEGWVANLMVYMIQEFHITSINSALISNIVNGFVNLFPVLGAIIADSFLGSFQVIWISSFIS 128 (296)
Q Consensus 51 ~~~~~~~~l~~~~~-~-~~y~~~~~l~~yl~~~lg~s~~~a~~i~~~~~~~~~~~~l~~G~laDr~iGR~~~i~i~~~l~ 128 (296)
++|..+...+.+.. . ..|+...+ ...+.+++|++..+.+++.++.... .++.+++|+++|| +|||+++.++.+++
T Consensus 25 ~Rw~~lva~~~~~~~~g~~y~fsv~-s~~L~~~lgls~~~l~~i~svg~~~-g~~~lp~G~L~Dr-~G~R~vllig~ll~ 101 (591)
T PTZ00207 25 RRFALLVLGAFCSICTSFMYAFNLI-SGAMQARYNLTQRDLSTITTVGIAV-GYFLLPYSFIYDY-LGPRPIFVLSMTVF 101 (591)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHhCcCHHHHHHHHHHHHHH-HHHHHHHHHHHHH-hCcHHHHHHHHHHH
Confidence 34544444444444 4 56655543 3467889999999998887774443 4566678999999 79999999999999
Q ss_pred HHHHHHHHhhccccCCCCCccCCCCcCcCCCCchhhHHHHHHHHHHHHhhchhhhhhhhhhhccCCCccchhhHHHHHHH
Q 045564 129 LLGTILLDSTATFDSLRPQRCDIGLSLCKAPSKVQFAVLYSGIALACLGLGGLRFTLATMGANQFEIPQHQGIFFNWFFI 208 (296)
Q Consensus 129 ~ig~~~la~~~~~p~~~~~~c~~~~~~~~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~~~ad~f~~~~~r~~~f~~~y~ 208 (296)
.+|+++++++.. ... ..+.+.+++.|++.|+|.+...+.....+.+.|| + +|+...++...
T Consensus 102 ~iG~ll~ala~~-~~i----------------~~s~~~l~l~r~l~G~G~~~~~~~~~~~i~~~Fp-~-~RG~a~Gi~~~ 162 (591)
T PTZ00207 102 CLGTLLFALTFQ-EVI----------------EGSVVRLSVYNGLMTLGCMLFDLGAVVTVLSVFP-S-NRGAVVAIMKT 162 (591)
T ss_pred HHHHHHHHHHhc-ccc----------------cCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCh-h-hhHHHHHHHHH
Confidence 999998887621 100 0246778889999999999888888888999998 3 58999999999
Q ss_pred HHHHHHHH-HHHHHHhhhccccchhhHHHHHHHHHHH
Q 045564 209 LTYASTVI-SSAAFVYIEDNLSWRLGSGLNIAANLAG 244 (296)
Q Consensus 209 ~~~iG~~i-~p~v~~~l~~~~gw~~~F~i~~~~~~~~ 244 (296)
..++|+.+ +++..+++.+ +|+..|++.+++.++.
T Consensus 163 ~~gLGsaI~~~l~~~l~~~--~~~~~fl~l~vl~~vv 197 (591)
T PTZ00207 163 FTGLGSAILGSIQLAFFSD--NTSAYFFFLMSFALVV 197 (591)
T ss_pred HHHHHHHHHHHHHHHHHHH--hHHHHHHHHHHHHHHH
Confidence 99999875 5555666553 5777777766644443
No 100
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.39 E-value=1.6e-11 Score=115.05 Aligned_cols=147 Identities=14% Similarity=0.059 Sum_probs=113.8
Q ss_pred hHHHhHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhcchHHHHHHHHHHHHHHHHHHHhhccccCCC
Q 045564 66 LGEGWVANLMVYMIQEFHITSINSALISNIVNGFVNLFPVLGAIIADSFLGSFQVIWISSFISLLGTILLDSTATFDSLR 145 (296)
Q Consensus 66 ~~y~~~~~l~~yl~~~lg~s~~~a~~i~~~~~~~~~~~~l~~G~laDr~iGR~~~i~i~~~l~~ig~~~la~~~~~p~~~ 145 (296)
...+...+++.|+.+++|++..+++.+.+...++..++.++.|+++|| +|||+.+.++.++..+..+.+....
T Consensus 253 ~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr-~g~~~~~~~~~~~~~~~~~~~~~~~------ 325 (405)
T TIGR00891 253 YSHPIQDLLPTYLKADLGLSPHTVANIVVFSNIGAIVGGCVFGFLGDW-LGRRKAYVCSLLAGQLLIIPVFAIG------ 325 (405)
T ss_pred HHhhhhhhhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCchhhhHHHHHHHHHHHHHHHHhC------
Confidence 444566778999999999999999999999999999999999999999 7999998887765432221111110
Q ss_pred CCccCCCCcCcCCCCchhhHHHHHHHHHHHHhhchhhhhhhhhhhccCCCccchhhHHHHHHHHHHHHHHHHHHHHHhhh
Q 045564 146 PQRCDIGLSLCKAPSKVQFAVLYSGIALACLGLGGLRFTLATMGANQFEIPQHQGIFFNWFFILTYASTVISSAAFVYIE 225 (296)
Q Consensus 146 ~~~c~~~~~~~~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~~~ad~f~~~~~r~~~f~~~y~~~~iG~~i~p~v~~~l~ 225 (296)
.+...+.++.++.++..++..+..++++.|.+|++ .|++.+++.+...++|+.++|++.|++.
T Consensus 326 ----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~g~~~~~~~~g~~~g~~~~g~l~ 388 (405)
T TIGR00891 326 ----------------ANVAVLGLGLFFQQMLVQGIWGILPKHLGEYFPTD-QRAAGLGFTYQLGNLGGALAPIIGALLA 388 (405)
T ss_pred ----------------CchHHHHHHHHHHHHHHccchhhHHHHHhhhCCcc-hhHHHhhHHHHHHHHHHHHHHHHHHHHH
Confidence 12234445555666666667778888999999854 7899999989999999999999999999
Q ss_pred cccc-chhhHHH
Q 045564 226 DNLS-WRLGSGL 236 (296)
Q Consensus 226 ~~~g-w~~~F~i 236 (296)
+..| |+..|..
T Consensus 389 ~~~g~~~~~~~~ 400 (405)
T TIGR00891 389 QRLDEYGTALAS 400 (405)
T ss_pred HhccccchhHHh
Confidence 9888 7766654
No 101
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.38 E-value=4.3e-11 Score=117.40 Aligned_cols=172 Identities=10% Similarity=0.040 Sum_probs=126.0
Q ss_pred CCchhHHHHHHHHH--H-hHHHhHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhc-----chHHH-H
Q 045564 51 GGRTALLSRTVTCL--T-LGEGWVANLMVYMIQEFHITSINSALISNIVNGFVNLFPVLGAIIADSFL-----GSFQV-I 121 (296)
Q Consensus 51 ~~~~~~~~l~~~~~--~-~~y~~~~~l~~yl~~~lg~s~~~a~~i~~~~~~~~~~~~l~~G~laDr~i-----GR~~~-i 121 (296)
..+|....++...+ . ..+.....++.|+. +.|.+..+.+....+... +++.++.|+++|| + ||||. +
T Consensus 9 ~~~~~~~~~~~l~~~~gl~~~~~~~~l~~~l~-~~g~~~~~ig~~~~~~~~--~~~~~l~gpl~Dr-~~~~~~Grrr~~l 84 (491)
T PRK11010 9 FQQPNSAILLILGFASGLPLALTSGTLQAWMT-VENIDLKTIGFFSLVGQA--YVFKFLWSPLMDR-YTPPFLGRRRGWL 84 (491)
T ss_pred HcccHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCCCCHHHHHHHHHHHHH--HHHHHHHHHHHHc-ccccCCCCchHHH
Confidence 34444555555555 3 44445556677765 458888888876333222 4688999999999 7 99986 5
Q ss_pred HHHHHHHHHHHHHHHhhccccCCCCCccCCCCcCcCCCCchhhHHHHHHHHHHHHhhchhhhhhhhhhhccCCCccchhh
Q 045564 122 WISSFISLLGTILLDSTATFDSLRPQRCDIGLSLCKAPSKVQFAVLYSGIALACLGLGGLRFTLATMGANQFEIPQHQGI 201 (296)
Q Consensus 122 ~i~~~l~~ig~~~la~~~~~p~~~~~~c~~~~~~~~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~~~ad~f~~~~~r~~ 201 (296)
.++.+...++.+++++.. | ..+...+++.+++.+++.+...+...++..|.+|++ +|++
T Consensus 85 l~~~i~~~~~~~~~a~~~--~------------------~~~l~~l~~~~~l~~~~~a~~~i~~~a~~~~~~~~~-~rg~ 143 (491)
T PRK11010 85 LATQLLLLVAIAAMGFLE--P------------------GTQLRWLAALAVVIAFCSASQDIVFDAWKTDVLPAE-ERGA 143 (491)
T ss_pred HHHHHHHHHHHHHHHHcC--C------------------cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChh-hhHH
Confidence 566666666665554431 1 124566777888889999999999999999999844 6899
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhc-cccchhhHHHHHHHHHHHHHH
Q 045564 202 FFNWFFILTYASTVISSAAFVYIED-NLSWRLGSGLNIAANLAGVVI 247 (296)
Q Consensus 202 ~f~~~y~~~~iG~~i~p~v~~~l~~-~~gw~~~F~i~~~~~~~~~~~ 247 (296)
+.++..++.++|..+++.+.+++.+ ..|||..|++.++..++..+.
T Consensus 144 ~~~i~~~g~~lG~llg~~l~~~l~~~~~GWr~~f~i~a~l~ll~~l~ 190 (491)
T PRK11010 144 GAAISVLGYRLAMLVSGGLALWLADRYLGWQGMYWLMAALLIPCIIA 190 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcccCHHHHHHHHHHHHHHHHHH
Confidence 9999889999999999999999988 469999999988766555444
No 102
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.38 E-value=4.5e-11 Score=113.03 Aligned_cols=160 Identities=16% Similarity=0.081 Sum_probs=122.5
Q ss_pred hHHHhHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhcchHHHHHHHHHHHHHHHHHHHhhccccCCC
Q 045564 66 LGEGWVANLMVYMIQEFHITSINSALISNIVNGFVNLFPVLGAIIADSFLGSFQVIWISSFISLLGTILLDSTATFDSLR 145 (296)
Q Consensus 66 ~~y~~~~~l~~yl~~~lg~s~~~a~~i~~~~~~~~~~~~l~~G~laDr~iGR~~~i~i~~~l~~ig~~~la~~~~~p~~~ 145 (296)
.++....+++.|+.+ .|. .+.+...+.+.++..++.++.|+++|| +||||.+.++.++..++.+++....
T Consensus 231 ~~~~~~~~~~~~~~~-~~~--~~~~~~~~~~~~~~~~~~~~~g~l~~r-~~~~~~~~~~~~~~~~~~~~~~~~~------ 300 (399)
T PRK05122 231 GFGTIATFITLYYAA-RGW--DGAALALTLFGVAFVGARLLFGNLINR-LGGLRVAIVSLLVEILGLLLLWLAP------ 300 (399)
T ss_pred HHHHHHHHHHHHHHH-ccc--ccchHHHHHHHHHHHHHHHHHHHHHHH-hccHHHHHHHHHHHHHHHHHHHHhc------
Confidence 444455677777753 455 344556677778888899999999999 7999999888887777665554321
Q ss_pred CCccCCCCcCcCCCCchhhHHHHHHHHHHHHhhchhhhhhhhhhhccCCCccchhhHHHHHHHHHHHHHHHHHHHHHhhh
Q 045564 146 PQRCDIGLSLCKAPSKVQFAVLYSGIALACLGLGGLRFTLATMGANQFEIPQHQGIFFNWFFILTYASTVISSAAFVYIE 225 (296)
Q Consensus 146 ~~~c~~~~~~~~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~~~ad~f~~~~~r~~~f~~~y~~~~iG~~i~p~v~~~l~ 225 (296)
+...+++.+++.|++.+...+.......|.+| ++.|++.+++++...++|..++|.+.|++.
T Consensus 301 -----------------~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~-~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~ 362 (399)
T PRK05122 301 -----------------SPWMALIGAALTGFGFSLVFPALGVEAVKRVP-PQNRGAALGAYSVFLDLSLGITGPLAGLVA 362 (399)
T ss_pred -----------------cHHHHHHHHHHHHHhHHHHHHHHHHHHHHhCC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 22345667788899988888887788888887 457899999999999999999999999999
Q ss_pred ccccchhhHHHHHHHHHHHHHHHHhCCC
Q 045564 226 DNLSWRLGSGLNIAANLAGVVIFLSGKH 253 (296)
Q Consensus 226 ~~~gw~~~F~i~~~~~~~~~~~~~~~~~ 253 (296)
+..||++.|++.+++.+++++..+...+
T Consensus 363 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 390 (399)
T PRK05122 363 SWFGYPSIFLAAALAALLGLALTWLLYR 390 (399)
T ss_pred HHcCHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 9899999999988877776665444333
No 103
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.38 E-value=6.1e-11 Score=111.86 Aligned_cols=151 Identities=11% Similarity=0.073 Sum_probs=116.3
Q ss_pred hHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhcchHHHHHHHHHHHHHHHHHHHhhccccCCCCCcc
Q 045564 70 WVANLMVYMIQEFHITSINSALISNIVNGFVNLFPVLGAIIADSFLGSFQVIWISSFISLLGTILLDSTATFDSLRPQRC 149 (296)
Q Consensus 70 ~~~~l~~yl~~~lg~s~~~a~~i~~~~~~~~~~~~l~~G~laDr~iGR~~~i~i~~~l~~ig~~~la~~~~~p~~~~~~c 149 (296)
...+++.|+.+ .|.+..+++...+...++..++.++.|+++|| +|||+.+..+.++..++.+.+. ..
T Consensus 219 ~~~~lp~~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr-~~~~~~l~~~~~~~~~~~~~~~-~~---------- 285 (381)
T PRK03633 219 LYGLMPLYLNH-QGMSDASIGFWMALLVSAGILGQWPIGRLADR-FGRLLVLRVQVFVVILGSIAML-SQ---------- 285 (381)
T ss_pred HHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHH-cCcHHHHHHHHHHHHHHHHHHh-hh----------
Confidence 34567778864 69999999988999999999999999999999 7999999888777766554322 10
Q ss_pred CCCCcCcCCCCchhhHHHHHHHHHHHHhhchhhhhhhhhhhccCCCccchhhHHHHHHHHHHHHHHHHHHHHHhhhcccc
Q 045564 150 DIGLSLCKAPSKVQFAVLYSGIALACLGLGGLRFTLATMGANQFEIPQHQGIFFNWFFILTYASTVISSAAFVYIEDNLS 229 (296)
Q Consensus 150 ~~~~~~~~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~~~ad~f~~~~~r~~~f~~~y~~~~iG~~i~p~v~~~l~~~~g 229 (296)
......+++.+++.+...|...+...|..|++ +++...+.++...++|..+||.+.|++.|.+|
T Consensus 286 ---------------~~~~~~~~l~g~~~~~~~p~~~~~~~~~~~~~-~~~~~~~~~~~~~~lG~~igp~~~G~l~~~~g 349 (381)
T PRK03633 286 ---------------AAMAPALFILGAAGFTLYPVAMAWACEKVEHH-ELVAMNQALLLSYTVGSLLGPSFTAMLMQNYS 349 (381)
T ss_pred ---------------HHHHHHHHHHHHHHHhHHHHHHHHHHccCCHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 12233455667666677788888889988743 45666777778889999999999999999999
Q ss_pred chhhHHHHHHHHHHHHHHHH
Q 045564 230 WRLGSGLNIAANLAGVVIFL 249 (296)
Q Consensus 230 w~~~F~i~~~~~~~~~~~~~ 249 (296)
|++.|.+.+.+.+++.+..+
T Consensus 350 ~~~~f~~~~~~~l~~~~~~~ 369 (381)
T PRK03633 350 DNLLFIMIASVSFIYLLMLL 369 (381)
T ss_pred ccHHHHHHHHHHHHHHHHHH
Confidence 99999988776665554443
No 104
>PRK03545 putative arabinose transporter; Provisional
Probab=99.38 E-value=7.7e-11 Score=111.42 Aligned_cols=160 Identities=11% Similarity=-0.067 Sum_probs=121.4
Q ss_pred hHHHhHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhcchHHHHHHHHHHHHHHHHHHHhhccccCCC
Q 045564 66 LGEGWVANLMVYMIQEFHITSINSALISNIVNGFVNLFPVLGAIIADSFLGSFQVIWISSFISLLGTILLDSTATFDSLR 145 (296)
Q Consensus 66 ~~y~~~~~l~~yl~~~lg~s~~~a~~i~~~~~~~~~~~~l~~G~laDr~iGR~~~i~i~~~l~~ig~~~la~~~~~p~~~ 145 (296)
..++...+++.|+.+++|.+..+++.+.+...++..++.++.|+++|| +|||+.+ ++..+..++...+....
T Consensus 220 ~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr-~~~~~~~-~~~~~~~~~~~~l~~~~------ 291 (390)
T PRK03545 220 AHFTAYSYIEPFVQQVAGLSENFATLLLLLFGGAGIIGSVLFSRLGNR-HPSGFLL-IAIALLLVCLLLLLPAA------ 291 (390)
T ss_pred HHHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHHHHHHHHHHHHHhhc-cchhHHH-HHHHHHHHHHHHHHHHh------
Confidence 455556778888888899999999999999999999999999999999 7987654 44444433333222111
Q ss_pred CCccCCCCcCcCCCCchhhHHHHHHHHHHHHhhchhhhhhhhhhhccCCCccchhhHHHHHHHHHHHHHHHHHHHHHhhh
Q 045564 146 PQRCDIGLSLCKAPSKVQFAVLYSGIALACLGLGGLRFTLATMGANQFEIPQHQGIFFNWFFILTYASTVISSAAFVYIE 225 (296)
Q Consensus 146 ~~~c~~~~~~~~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~~~ad~f~~~~~r~~~f~~~y~~~~iG~~i~p~v~~~l~ 225 (296)
.+...+++..++.|++.+...+...+.+.+..| + .|+++.++++...++|..+||++.|++.
T Consensus 292 ----------------~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~-~-~~~~~~g~~~~~~~~g~~~G~~~~G~~~ 353 (390)
T PRK03545 292 ----------------NSEWHLSVLSIFWGIAIMCIGLAMQVKVLKLAP-D-ATDVAMALFSGIFNIGIGAGALLGNQVS 353 (390)
T ss_pred ----------------chHHHHHHHHHHHHHHHhcchHHHHHHHHHhCC-C-cHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 123455566677777777666777777888776 3 5788899888888999999999999999
Q ss_pred ccccchhhHHHHHHHHHHHHHHHHhC
Q 045564 226 DNLSWRLGSGLNIAANLAGVVIFLSG 251 (296)
Q Consensus 226 ~~~gw~~~F~i~~~~~~~~~~~~~~~ 251 (296)
+.+|++..|++.+++.++++++....
T Consensus 354 ~~~g~~~~~~~~~~~~~~~~~~~~~~ 379 (390)
T PRK03545 354 LHLGLSSIGYVGAALALAALVWSILI 379 (390)
T ss_pred hccChhHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999988877777665433
No 105
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.37 E-value=2.6e-11 Score=129.73 Aligned_cols=138 Identities=9% Similarity=-0.019 Sum_probs=105.0
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhhhhcchHHHHHHHHHHHHHHHHHHHhhccccCCCCCccCCCCcCcCCCCchhhHH
Q 045564 87 INSALISNIVNGFVNLFPVLGAIIADSFLGSFQVIWISSFISLLGTILLDSTATFDSLRPQRCDIGLSLCKAPSKVQFAV 166 (296)
Q Consensus 87 ~~a~~i~~~~~~~~~~~~l~~G~laDr~iGR~~~i~i~~~l~~ig~~~la~~~~~p~~~~~~c~~~~~~~~~~~~~~~~~ 166 (296)
...+++.+++.+...++.+++|+++|| +|||+++.+.....++..++..+.... .+.+.
T Consensus 52 ~~~~l~~~~~~l~~~l~~~~~G~laDr-~~rk~~~~~~~~~~~~~~~~~~~~~~~--------------------~s~~~ 110 (1140)
T PRK06814 52 ALVTLAGAVFILPFFIFSALAGQLADK-YDKAKLAKILKFAEIGIAALAIYGFHL--------------------NSVPL 110 (1140)
T ss_pred HHHHHHHHHHHHHHHHHhhhHHhhhhh-ccHHHHHHHHHHHHHHHHHHHHHHHHH--------------------hhHHH
Confidence 345677888999999999999999999 799998644222221111111111100 14577
Q ss_pred HHHHHHHHHHhhchhhhhhhhhhhccCCCccchhhHHHHHHHHHHHHHHHHHHHHHhhhccccchhhHHHHHHHHHHHHH
Q 045564 167 LYSGIALACLGLGGLRFTLATMGANQFEIPQHQGIFFNWFFILTYASTVISSAAFVYIEDNLSWRLGSGLNIAANLAGVV 246 (296)
Q Consensus 167 l~~~~~l~gig~g~~~~~~~~~~ad~f~~~~~r~~~f~~~y~~~~iG~~i~p~v~~~l~~~~gw~~~F~i~~~~~~~~~~ 246 (296)
+++.|++.|++.+...|...+++.|++|+ ++|+.+.++..++.++|.++||.++|++.+..||++.|.+.+++.+++++
T Consensus 111 l~~~~~l~gi~~a~~~p~~~a~l~~~~~~-~~~~~a~~~~~~~~~ig~~igp~l~g~l~~~~~~~~~~~~~~~~~~~~~~ 189 (1140)
T PRK06814 111 LFAALFLMGIHSALFGPIKYSILPDHLNK-DELLGANALVEAGTFIAILLGTIIGGLATISGNFVILVALLMGIAVLGWL 189 (1140)
T ss_pred HHHHHHHHHHHHHhhchHHHHhhHhhcCc-cccchhhHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHH
Confidence 88999999999999999999999999995 47899999999999999999999999999989999998555444444333
No 106
>TIGR00901 2A0125 AmpG-related permease.
Probab=99.37 E-value=3.5e-11 Score=112.05 Aligned_cols=155 Identities=12% Similarity=0.094 Sum_probs=114.0
Q ss_pred hHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhh----cchHHHH-HHHHHHHHHHHHHHHhhccccCC
Q 045564 70 WVANLMVYMIQEFHITSINSALISNIVNGFVNLFPVLGAIIADSF----LGSFQVI-WISSFISLLGTILLDSTATFDSL 144 (296)
Q Consensus 70 ~~~~l~~yl~~~lg~s~~~a~~i~~~~~~~~~~~~l~~G~laDr~----iGR~~~i-~i~~~l~~ig~~~la~~~~~p~~ 144 (296)
+...+...+.+++|+|.++.+..... .....+ .++.|+++||+ +||||.+ +.+.++..+....+++.. +
T Consensus 6 ~~~~~~~~~~~~~g~s~~~~g~~~~~-~~~~~~-~~~~g~~~Dr~~~~~~Grr~~~l~~~~~~~~~~~~~l~~~~--~-- 79 (356)
T TIGR00901 6 LVGNTLPYWLRSKNVSLKTIGFFSLV-GLPYSL-KFLWSPLVDTVYLPFFGRRRSWLVLTQVLLLSLLLILSFLV--P-- 79 (356)
T ss_pred hHHhHHHHHHHHcCCCHHHHHHHHHH-HHHHHH-HHHHHHHHhcccCCCCCccHHHHHHHHHHHHHHHHHHHcCC--c--
Confidence 34445556667899999999888655 333333 88999999994 3999975 555666655544443321 1
Q ss_pred CCCccCCCCcCcCCCCchhhHHHHHHHHHHHHhhchhhhhhhhhhhccCCCccchhhHHHHHHHHHHHHHHHHHHHHHhh
Q 045564 145 RPQRCDIGLSLCKAPSKVQFAVLYSGIALACLGLGGLRFTLATMGANQFEIPQHQGIFFNWFFILTYASTVISSAAFVYI 224 (296)
Q Consensus 145 ~~~~c~~~~~~~~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~~~ad~f~~~~~r~~~f~~~y~~~~iG~~i~p~v~~~l 224 (296)
..+...++...++.+++.+...+...++++|.+|+ ++|+.+.++...+.++|.++++.+++++
T Consensus 80 ----------------~~~l~~l~~~~~~~~~~~~~~~~~~~a~~~~~~~~-~~r~~~~~~~~~~~~~G~~~~~~l~~~l 142 (356)
T TIGR00901 80 ----------------STDLPLLAGLAFLIAFFSATQDIALDAWRLEILSD-EELGYGSTIYIVGYRAGMLLSGSLALVL 142 (356)
T ss_pred ----------------chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCH-hhhchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 12334455555667778888889999999999984 4789999998999999999999999999
Q ss_pred hcccc--------chhhHHHHHHHHHHHHHH
Q 045564 225 EDNLS--------WRLGSGLNIAANLAGVVI 247 (296)
Q Consensus 225 ~~~~g--------w~~~F~i~~~~~~~~~~~ 247 (296)
....| ||..|++.++..++.+++
T Consensus 143 ~~~~g~~~~~~~~wr~~f~i~ai~~l~~~~~ 173 (356)
T TIGR00901 143 ASPEFANTGLITLWGYIFFWTALLILPGLLV 173 (356)
T ss_pred hhhcccccccccccHHHHHHHHHHHHHHHHH
Confidence 87777 999999988876665544
No 107
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.37 E-value=3.5e-11 Score=111.86 Aligned_cols=158 Identities=14% Similarity=0.153 Sum_probs=111.4
Q ss_pred HHHHHHHHHhC--CChhHHHHHHHH--HH---HHHHHHHHHHHHHhhhhcchHHHHHHHHHHHHHHHHHHHhhccccCCC
Q 045564 73 NLMVYMIQEFH--ITSINSALISNI--VN---GFVNLFPVLGAIIADSFLGSFQVIWISSFISLLGTILLDSTATFDSLR 145 (296)
Q Consensus 73 ~l~~yl~~~lg--~s~~~a~~i~~~--~~---~~~~~~~l~~G~laDr~iGR~~~i~i~~~l~~ig~~~la~~~~~p~~~ 145 (296)
++..++.++.. .+.++.+.+.+. +. +...++.++.|+++|| +||||++.++.++..++.+++.+...++..
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~l~dr-~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~- 91 (394)
T TIGR00883 14 FAAVLVFHTFFPPSGDPLVALLATFATFAAGFLARPLGAIVFGHFGDR-IGRKKTLVITLLMMGIGTLLIGLLPSYATI- 91 (394)
T ss_pred HHHHHHHHHhcCCCCChHHHHHHHHHHHHHHHHHhhhHHHHhhhhhhh-hhhHHHHHHHHHHHHHHHHHHhhCCChhhh-
Confidence 44445555543 333444333322 22 2334678999999999 799999999999998888776654311000
Q ss_pred CCccCCCCcCcCCCCchhhHHHHHHHHHHHHhhchhhhhhhhhhhccCCCccchhhHHHHHHHHHHHHHHHHHHHHHhhh
Q 045564 146 PQRCDIGLSLCKAPSKVQFAVLYSGIALACLGLGGLRFTLATMGANQFEIPQHQGIFFNWFFILTYASTVISSAAFVYIE 225 (296)
Q Consensus 146 ~~~c~~~~~~~~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~~~ad~f~~~~~r~~~f~~~y~~~~iG~~i~p~v~~~l~ 225 (296)
.......++++|++.|++.+...+...++++|.+|++ +|+...++.+.+..+|..+++.+...+.
T Consensus 92 --------------~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~~~~~~~-~r~~~~~~~~~~~~~G~~i~~~~~~~~~ 156 (394)
T TIGR00883 92 --------------GIWAPILLLLARLIQGFSLGGEWGGAALYLAEYAPPG-KRGFYGSFQQVGAPVGLLLAALTVLLLS 156 (394)
T ss_pred --------------HHHHHHHHHHHHHHHHhhccccccccHHHhhhcCCcc-cchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0011235778899999999999999999999999844 6888999988899999999988776553
Q ss_pred --------ccccchhhHHHHHHHHHHHHHH
Q 045564 226 --------DNLSWRLGSGLNIAANLAGVVI 247 (296)
Q Consensus 226 --------~~~gw~~~F~i~~~~~~~~~~~ 247 (296)
+.++||+.|.+.++..+++.++
T Consensus 157 ~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~ 186 (394)
T TIGR00883 157 YLLGDDALLEWGWRIPFLVSAVLVLIGLYL 186 (394)
T ss_pred HhcCHHHhhccchHHHHHHHHHHHHHHHHH
Confidence 3579999999877766555443
No 108
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.37 E-value=1.7e-11 Score=118.90 Aligned_cols=161 Identities=11% Similarity=-0.011 Sum_probs=121.8
Q ss_pred hHHHhHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhh-cchHHHHHHHHHHH--HHHHHHHHhhcccc
Q 045564 66 LGEGWVANLMVYMIQEFHITSINSALISNIVNGFVNLFPVLGAIIADSF-LGSFQVIWISSFIS--LLGTILLDSTATFD 142 (296)
Q Consensus 66 ~~y~~~~~l~~yl~~~lg~s~~~a~~i~~~~~~~~~~~~l~~G~laDr~-iGR~~~i~i~~~l~--~ig~~~la~~~~~p 142 (296)
.++....+++.|+. ++|++..+++.+.++..++..++.+++|+++||. +++++...++.... .++.+++...
T Consensus 256 ~~~~~~~~l~~~~~-~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~l~~ll~~~~---- 330 (455)
T TIGR00892 256 GFFAPIIFLVPYAK-DKGVDEYEAAFLLSIIGFVDIFARPSCGLIAGLKWIRPHVQYLFSFALLFNGLTHLLCALA---- 330 (455)
T ss_pred HccchHHHHHHHHH-HcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCHHHHHHHHHHHHHHHHHHHHHHHh----
Confidence 66666778888986 4799999999999999999999999999999983 23444443333222 2222222111
Q ss_pred CCCCCccCCCCcCcCCCCchhhHHHHHHHHHHHHhhchhhhhhhhhhhccCCCccchhhHHHHHHHHHHHHHHHHHHHHH
Q 045564 143 SLRPQRCDIGLSLCKAPSKVQFAVLYSGIALACLGLGGLRFTLATMGANQFEIPQHQGIFFNWFFILTYASTVISSAAFV 222 (296)
Q Consensus 143 ~~~~~~c~~~~~~~~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~~~ad~f~~~~~r~~~f~~~y~~~~iG~~i~p~v~~ 222 (296)
.+...+++.+++.|++.+...++..+.+.|.+|+ +.+++.+++++...++|..+||.+.|
T Consensus 331 -------------------~~~~~~~i~~~~~G~~~g~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~lg~~igp~i~G 390 (455)
T TIGR00892 331 -------------------GDYTGLVIYCIFFGLSFGSVGALLFEVLMDLVGA-QRFSSAVGLVTIVECCAVLIGPPLAG 390 (455)
T ss_pred -------------------chHHHHHHHHHHHHHHhchHHHHHHHHHHHHhhH-HHHhhHHhHHHHHHHHHHHcccccee
Confidence 1235567778889999999999999999999984 47899999999999999999999999
Q ss_pred hhhccc-cchhhHHHHHHHHHHHHHHHHhC
Q 045564 223 YIEDNL-SWRLGSGLNIAANLAGVVIFLSG 251 (296)
Q Consensus 223 ~l~~~~-gw~~~F~i~~~~~~~~~~~~~~~ 251 (296)
++.+.. +|++.|++.+++.+++.+..++.
T Consensus 391 ~l~~~~g~~~~~f~~~~~~~li~~~~~~~~ 420 (455)
T TIGR00892 391 RLVDATKNYKYIFYASGSIVVSAGLFLAIG 420 (455)
T ss_pred eeehhcCCcchHHHHhhHHHHHHHHHHHHH
Confidence 998877 59999999888776666544443
No 109
>PRK12382 putative transporter; Provisional
Probab=99.37 E-value=3.3e-11 Score=113.84 Aligned_cols=157 Identities=14% Similarity=0.094 Sum_probs=121.8
Q ss_pred hHHHhHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhcchHHHHHHHHHHHHHHHHHHHhhccccCCC
Q 045564 66 LGEGWVANLMVYMIQEFHITSINSALISNIVNGFVNLFPVLGAIIADSFLGSFQVIWISSFISLLGTILLDSTATFDSLR 145 (296)
Q Consensus 66 ~~y~~~~~l~~yl~~~lg~s~~~a~~i~~~~~~~~~~~~l~~G~laDr~iGR~~~i~i~~~l~~ig~~~la~~~~~p~~~ 145 (296)
.+..+..+.+.|+.+ .|.+. .+.....+..+..++.++.|++.|| +||||.+.++..+..++.+++.+..
T Consensus 231 ~~~~~~~~~~~~~~~-~~~~~--~~~~~~~~~~~~~~~~~~~g~l~~r-~g~~~~~~~~~~~~~~~~~~~~~~~------ 300 (392)
T PRK12382 231 GFAVIGTFVSLYFAS-KGWAM--AGFTLTAFGGAFVLMRVLFGWMPDR-FGGVKVAIVSLLVETVGLLLLWLAP------ 300 (392)
T ss_pred HHhHHHHHHHHHHHh-cCCch--hHHHHHHHHHHHHHHHHHHHHHHHh-cCCCeehHHHHHHHHHHHHHHHHcc------
Confidence 444455666777754 45543 4555666777788899999999999 7999999998888877766544321
Q ss_pred CCccCCCCcCcCCCCchhhHHHHHHHHHHHHhhchhhhhhhhhhhccCCCccchhhHHHHHHHHHHHHHHHHHHHHHhhh
Q 045564 146 PQRCDIGLSLCKAPSKVQFAVLYSGIALACLGLGGLRFTLATMGANQFEIPQHQGIFFNWFFILTYASTVISSAAFVYIE 225 (296)
Q Consensus 146 ~~~c~~~~~~~~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~~~ad~f~~~~~r~~~f~~~y~~~~iG~~i~p~v~~~l~ 225 (296)
+...++++.++.+++.+...+...+...|.+|+ ++|++.+++++...++|..++|.+.+++.
T Consensus 301 -----------------~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~g~~ig~~~~g~l~ 362 (392)
T PRK12382 301 -----------------TAWVALAGAALTGAGCSLIFPALGVEVVKRVPS-QVRGTALGGYAAFQDIAYGVSGPLAGMLA 362 (392)
T ss_pred -----------------cHHHHHHHHHHHHHHHHhHHHHHHHHHHHhcCH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 224456677788888888888888888898884 47899999999999999999999999999
Q ss_pred ccccchhhHHHHHHHHHHHHHHHHh
Q 045564 226 DNLSWRLGSGLNIAANLAGVVIFLS 250 (296)
Q Consensus 226 ~~~gw~~~F~i~~~~~~~~~~~~~~ 250 (296)
+..||++.|.+.+++.+++.++.+.
T Consensus 363 ~~~g~~~~~~~~~~~~~~~~~~~~~ 387 (392)
T PRK12382 363 TSFGYPSVFLAGAISAVLGIIVTIL 387 (392)
T ss_pred HHhCchHHHHHHHHHHHHHHHHHHh
Confidence 9999999999988877777665543
No 110
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=99.36 E-value=2.6e-11 Score=114.40 Aligned_cols=181 Identities=16% Similarity=0.097 Sum_probs=146.9
Q ss_pred ccCCchhHHHHHHHHH-H-hHHHhHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhcchHHHHHHHHH
Q 045564 49 KRGGRTALLSRTVTCL-T-LGEGWVANLMVYMIQEFHITSINSALISNIVNGFVNLFPVLGAIIADSFLGSFQVIWISSF 126 (296)
Q Consensus 49 ~~~~~~~~~~l~~~~~-~-~~y~~~~~l~~yl~~~lg~s~~~a~~i~~~~~~~~~~~~l~~G~laDr~iGR~~~i~i~~~ 126 (296)
++.++|.++....... . ....+.+.+.+++.+++|+|+.|.++++.+-.+...+.-++-|++.|| +|-|++..++.+
T Consensus 9 k~~~~~~L~~S~~af~v~F~VW~l~s~l~~~i~~~~~LS~~q~~ll~aiPil~GallRl~~g~l~dr-fGgR~~~~~s~~ 87 (417)
T COG2223 9 KRIARRNLWLSTLAFDVGFMVWTLFSPLGVFIKSDFGLSEGQKGLLVAIPILVGALLRLPYGFLTDR-FGGRKWTILSML 87 (417)
T ss_pred ccchhHHHHHHHHHHHHHHHHHHHHHHHHhhhccccCCCHHHHHHHHHHHHHHhHHHHHHHHhhhcc-cCchHHHHHHHH
Confidence 4567777766666555 4 555566778888999999999999999999999999999999999999 899999999999
Q ss_pred HHHHHHHHHHhhccccCCCCCccCCCCcCcCCCCchhhHHHHHHHHHHHHhhchhhhhhhhhhhccCCCccchhhHHHHH
Q 045564 127 ISLLGTILLDSTATFDSLRPQRCDIGLSLCKAPSKVQFAVLYSGIALACLGLGGLRFTLATMGANQFEIPQHQGIFFNWF 206 (296)
Q Consensus 127 l~~ig~~~la~~~~~p~~~~~~c~~~~~~~~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~~~ad~f~~~~~r~~~f~~~ 206 (296)
+..+-.+.++++...| +.+.+++..++.|++.| ..+...++.+..||++ +++.+.+++
T Consensus 88 l~~IP~~~~~~a~~~~--------------------~~~~ll~~gll~G~~Ga-sFav~m~~~s~~fP~~-~qG~AlGI~ 145 (417)
T COG2223 88 LLLIPCLGLAFAVTYP--------------------STWQLLVIGLLLGLAGA-SFAVGMPNASFFFPKE-KQGLALGIA 145 (417)
T ss_pred HHHHHHHHHHHHccCC--------------------chHHHHHHHHHHhcccc-eehcccccccccCChh-hhhHHHHHh
Confidence 9888777777764222 22567777788888766 5667778899999954 789999998
Q ss_pred HHHHHHHHHHHHHHHHhhhcccc---chhhHHHHHHHHHHHHHHHHhCCC
Q 045564 207 FILTYASTVISSAAFVYIEDNLS---WRLGSGLNIAANLAGVVIFLSGKH 253 (296)
Q Consensus 207 y~~~~iG~~i~p~v~~~l~~~~g---w~~~F~i~~~~~~~~~~~~~~~~~ 253 (296)
. +.|+|..+..+++.++....| |+..-.+..+.+++..+.+++..+
T Consensus 146 g-~GN~G~av~q~~~P~v~~~~g~~~w~~~~~i~~~~l~v~~v~~~~~~~ 194 (417)
T COG2223 146 G-AGNLGVAVAQLVAPLVAVAFGFLAWRNVAGIYVVALAIAAVLAWLGMN 194 (417)
T ss_pred c-cccccHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 8 889999999999999988888 999988888888777766665544
No 111
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.36 E-value=4e-11 Score=113.19 Aligned_cols=155 Identities=16% Similarity=0.021 Sum_probs=117.2
Q ss_pred HhHHHHHHHHHHHhCCChh---HHHHHHHHHHHHHHHHHHHHHHHhhhhcchHHHHHHHHHHHHHHHHHHHhhccccCCC
Q 045564 69 GWVANLMVYMIQEFHITSI---NSALISNIVNGFVNLFPVLGAIIADSFLGSFQVIWISSFISLLGTILLDSTATFDSLR 145 (296)
Q Consensus 69 ~~~~~l~~yl~~~lg~s~~---~a~~i~~~~~~~~~~~~l~~G~laDr~iGR~~~i~i~~~l~~ig~~~la~~~~~p~~~ 145 (296)
.....++.|+.+..+.... ..+.+.++..++..++.++.|+++|| +|||+.+.++.++..++.+.+....
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~g~l~dr-~g~~~~~~~~~~~~~~~~~~~~~~~------ 309 (408)
T PRK09874 237 SIAPILTLYVRELAGNVSNIAFISGMIASVPGVAALLSAPRLGKLGDR-IGPEKILITALIFSVLLLIPMSFVQ------ 309 (408)
T ss_pred HHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-cccchhHHHHHHHHHHHHHHHHHhc------
Confidence 3455667777765443322 23445556667778888899999999 7999999988877666554433221
Q ss_pred CCccCCCCcCcCCCCchhhHHHHHHHHHHHHhhchhhhhhhhhhhccCCCccchhhHHHHHHHHHHHHHHHHHHHHHhhh
Q 045564 146 PQRCDIGLSLCKAPSKVQFAVLYSGIALACLGLGGLRFTLATMGANQFEIPQHQGIFFNWFFILTYASTVISSAAFVYIE 225 (296)
Q Consensus 146 ~~~c~~~~~~~~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~~~ad~f~~~~~r~~~f~~~y~~~~iG~~i~p~v~~~l~ 225 (296)
+.+.+++.+++.|++.+...+...+...+..|+ +.|++.+++++...++|..+||.++|++.
T Consensus 310 -----------------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~g~~~gp~~~G~l~ 371 (408)
T PRK09874 310 -----------------TPLQLGILRFLLGAADGALLPAVQTLLVYNSSN-QIAGRIFSYNQSFRDIGNVTGPLMGAAIS 371 (408)
T ss_pred -----------------cHHHHHHHHHHHHhhhHhhHHHHHHHHHHhCCc-ccceeeehHHHHHHHHHHHhhHHHHHHHH
Confidence 234566777888999998888888888887774 46888999988889999999999999999
Q ss_pred ccccchhhHHHHHHHHHHHHHHH
Q 045564 226 DNLSWRLGSGLNIAANLAGVVIF 248 (296)
Q Consensus 226 ~~~gw~~~F~i~~~~~~~~~~~~ 248 (296)
+..||++.|++.++..+++.+..
T Consensus 372 ~~~g~~~~f~~~~~~~l~~~~~~ 394 (408)
T PRK09874 372 ANYGFRAVFLVTAGVVLFNAVYS 394 (408)
T ss_pred hhcchhHHHHHHHHHHHHHHHHH
Confidence 99999999999888777666544
No 112
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.35 E-value=1.2e-10 Score=110.89 Aligned_cols=161 Identities=16% Similarity=0.012 Sum_probs=117.0
Q ss_pred hHHHhHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhcchHHHHH-HHHHHHHHHHHHHHhhccccCC
Q 045564 66 LGEGWVANLMVYMIQEFHITSINSALISNIVNGFVNLFPVLGAIIADSFLGSFQVIW-ISSFISLLGTILLDSTATFDSL 144 (296)
Q Consensus 66 ~~y~~~~~l~~yl~~~lg~s~~~a~~i~~~~~~~~~~~~l~~G~laDr~iGR~~~i~-i~~~l~~ig~~~la~~~~~p~~ 144 (296)
.+++...++|.|++ ++|++..+++.+.....++..++.++.|+++|| +|||+.+. .+.+...++.+.+... |..
T Consensus 237 ~~~~~~~~~p~~~~-~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr-~~~~~~~~~~~~l~~~~~~~~l~~~---~~~ 311 (402)
T TIGR00897 237 GLFGFAVFLPMFVA-ELGFSTSEWLQIWGTFFFTNIVFNVIFGIVGDK-LGWMNTVRWFGGVGCGIFTLALYYI---PQH 311 (402)
T ss_pred HHHHHHHHHHHHHH-HcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHh-hcchhHHHHHHHHHHHHHHHHHHHH---HHc
Confidence 67777888998884 589999999988888999999999999999999 79988764 2333333322222211 110
Q ss_pred CCCccCCCCcCcCCCCchhhHHHHHHHHHHHHhhchhhhhhhhhhhccCCCccchhhHHHHHHHHHHHHHHHHHHHHHhh
Q 045564 145 RPQRCDIGLSLCKAPSKVQFAVLYSGIALACLGLGGLRFTLATMGANQFEIPQHQGIFFNWFFILTYASTVISSAAFVYI 224 (296)
Q Consensus 145 ~~~~c~~~~~~~~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~~~ad~f~~~~~r~~~f~~~y~~~~iG~~i~p~v~~~l 224 (296)
. ..+....++..++.|++.+...+ ..+...|..| + +|++.+++++.+.++|+.++|.+.+++
T Consensus 312 ~---------------~~~~~~~~~~~~~~G~~~~~~~~-~~~~~~~~~~-~-~~g~~~g~~~~~~~lg~~~gp~i~g~l 373 (402)
T TIGR00897 312 F---------------GHSFAVALIIAIALGIFLAGYVP-LAAVFPTLAP-K-HKGAAMSVLNLSAGLSAFLAPAIAVLF 373 (402)
T ss_pred c---------------CCcHHHHHHHHHHHHHHHHHHHH-HHHHHHhhCc-c-hhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0 01234455566677777666544 3455667665 3 689999999999999999999999999
Q ss_pred hccccchhhHHHHHHHHHHHHHHHH
Q 045564 225 EDNLSWRLGSGLNIAANLAGVVIFL 249 (296)
Q Consensus 225 ~~~~gw~~~F~i~~~~~~~~~~~~~ 249 (296)
.+..||...|++.+++.+++.++.+
T Consensus 374 ~~~~g~~~~~~~~a~~~~i~~~~~~ 398 (402)
T TIGR00897 374 IGFFGAIGVVWIFAALYVVSAFLTA 398 (402)
T ss_pred HhhcchHHHHHHHHHHHHHHHHHHH
Confidence 9999999999998887766655443
No 113
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.35 E-value=3.5e-11 Score=114.94 Aligned_cols=154 Identities=10% Similarity=0.002 Sum_probs=118.2
Q ss_pred hHHHHHHHHHHHh---CCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhcchHHHHHHHHHHHHHHHHHHHhhccccCCCC
Q 045564 70 WVANLMVYMIQEF---HITSINSALISNIVNGFVNLFPVLGAIIADSFLGSFQVIWISSFISLLGTILLDSTATFDSLRP 146 (296)
Q Consensus 70 ~~~~l~~yl~~~l---g~s~~~a~~i~~~~~~~~~~~~l~~G~laDr~iGR~~~i~i~~~l~~ig~~~la~~~~~p~~~~ 146 (296)
....++.|+.+.+ +.+..+.+.+.++......++.+++|+++|| +|||+.+.++.++..++.+++.+..
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr-~g~~~~~~~~~~l~~~~~~l~~~~~------- 313 (420)
T PRK09528 242 FDQQFPNFFASFFATPEQGTRVFGYLNSFQVFLEALIMFFAPFIINR-IGAKNALLLAGTIMAVRIIGSGFAT------- 313 (420)
T ss_pred HHHHHHHHHHHHHhccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCcchhhHHHHHHHHHHHHHHHhcc-------
Confidence 3345677776554 4566677888888888889999999999999 7999999998888877766654432
Q ss_pred CccCCCCcCcCCCCchhhHHHHHHHHHHHHhhchhhhhhhhhhhccCCCccchhhHHHH-HHHHHHHHHHHHHHHHHhhh
Q 045564 147 QRCDIGLSLCKAPSKVQFAVLYSGIALACLGLGGLRFTLATMGANQFEIPQHQGIFFNW-FFILTYASTVISSAAFVYIE 225 (296)
Q Consensus 147 ~~c~~~~~~~~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~~~ad~f~~~~~r~~~f~~-~y~~~~iG~~i~p~v~~~l~ 225 (296)
+...+++.+++.+++.+...+....++.|.+|++ .+++.++. +++..++|..++|.+.|++.
T Consensus 314 ----------------~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~-~~a~~~~~~~~~~~~lg~~ig~~~~G~l~ 376 (420)
T PRK09528 314 ----------------GPLEVSILKLLHAFEVPFLLVGVFKYITLNFDVR-LSATIYLVGFQFAKQLGAVFLSTLAGNLY 376 (420)
T ss_pred ----------------cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcc-ceeeeeeehHHHHHHHHHHHHHHHHHHHH
Confidence 2345566677888888877777788889999854 56666655 56778899999999999999
Q ss_pred ccccchhhHHHHHHHHHHHHHHH
Q 045564 226 DNLSWRLGSGLNIAANLAGVVIF 248 (296)
Q Consensus 226 ~~~gw~~~F~i~~~~~~~~~~~~ 248 (296)
+..||+..|.+.+++.++..++.
T Consensus 377 ~~~G~~~~f~~~~~~~~i~~~~~ 399 (420)
T PRK09528 377 DSIGFQGTYLILGGIVLLFTLIS 399 (420)
T ss_pred HhhCchHHHHHHHHHHHHHHHHH
Confidence 99999999998777665554443
No 114
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=99.34 E-value=5.7e-11 Score=113.04 Aligned_cols=163 Identities=9% Similarity=0.031 Sum_probs=114.8
Q ss_pred HHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhcchHHHHHHHHHHHHHHHHHHHhhccccCCCCCccCCC
Q 045564 73 NLMVYMIQEFHITSINSALISNIVNGFVNLFPVLGAIIADSFLGSFQVIWISSFISLLGTILLDSTATFDSLRPQRCDIG 152 (296)
Q Consensus 73 ~l~~yl~~~lg~s~~~a~~i~~~~~~~~~~~~l~~G~laDr~iGR~~~i~i~~~l~~ig~~~la~~~~~p~~~~~~c~~~ 152 (296)
+...+..+++|++..+++.......++..++.+++|+++|| +|||+.+.++.++..++.+++.+... +....
T Consensus 305 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~-~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~------ 376 (481)
T TIGR00879 305 YYSPTIFENAGVSTDHAFLVSIIVGAVNFAFTFVAIFLVDR-FGRRPLLLIGAAGMAICLFVLGILGA-SFVTG------ 376 (481)
T ss_pred HHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHH-hcchHHHHHHHHHHHHHHHHHHHHhh-cccCC------
Confidence 33445556789999888888888999999999999999999 79999999988887777666653321 10000
Q ss_pred CcCcCCCCchhhHHHHHHHHHHHHhhchhhhhhhhhhhccCCCccchhhHHHHHHHHHHHHHHHHHHHHHhhhccccchh
Q 045564 153 LSLCKAPSKVQFAVLYSGIALACLGLGGLRFTLATMGANQFEIPQHQGIFFNWFFILTYASTVISSAAFVYIEDNLSWRL 232 (296)
Q Consensus 153 ~~~~~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~~~ad~f~~~~~r~~~f~~~y~~~~iG~~i~p~v~~~l~~~~gw~~ 232 (296)
.+. ......+....++.+....+..+....+..|.+|++ .|+...++.+...++|+.++|.+.+++.++.+|++
T Consensus 377 ----~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-~~~~~~~~~~~~~~lg~~i~~~~~~~~~~~~~~~~ 450 (481)
T TIGR00879 377 ----SSK-SSGNVAIVFILLFIAFFAMGWGPVPWVIVSEIFPLS-LRPKGISIAVAANWLANFIVGFLFPTMLESIGVGG 450 (481)
T ss_pred ----ccc-chhHHHHHHHHHHHHHHHccccCeehhhhhccCChH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccc
Confidence 000 001112222222222222234466677779999844 78999999999999999999999999998889999
Q ss_pred hHHHHHHHHHHHHHHHH
Q 045564 233 GSGLNIAANLAGVVIFL 249 (296)
Q Consensus 233 ~F~i~~~~~~~~~~~~~ 249 (296)
.|++.+++.+++.++.+
T Consensus 451 ~f~~~~~~~~~~~i~~~ 467 (481)
T TIGR00879 451 VFIFFGGLNVLGLIFVY 467 (481)
T ss_pred eehhHHHHHHHHHHHHh
Confidence 99988877666655543
No 115
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.34 E-value=1e-10 Score=110.65 Aligned_cols=156 Identities=13% Similarity=-0.043 Sum_probs=117.5
Q ss_pred hHHHhHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhcchHHHHHHHHHHHHHHHHHHHhhccccCCC
Q 045564 66 LGEGWVANLMVYMIQEFHITSINSALISNIVNGFVNLFPVLGAIIADSFLGSFQVIWISSFISLLGTILLDSTATFDSLR 145 (296)
Q Consensus 66 ~~y~~~~~l~~yl~~~lg~s~~~a~~i~~~~~~~~~~~~l~~G~laDr~iGR~~~i~i~~~l~~ig~~~la~~~~~p~~~ 145 (296)
..+....+++.|+.+ .|.+..+++.+.....++..++.++.|+++|| +|||+.+.++.+...++.+.+....
T Consensus 235 ~~~~~~~~~p~~~~~-~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr-~g~~~~~~~~~~~~~~~~~~~~~~~------ 306 (406)
T PRK11551 235 VLYFLLNWLPSLLVG-QGLSRSQAGLVQIAFNIGGALGSLLIGALMDR-LRPRRVVLLIYAGILASLAALAAAP------ 306 (406)
T ss_pred HHHHHHHHHHHHHHh-CCCChhhhhHHHHHHHHHHHHHHHHHHHHHHH-HhHHHHHHHHHHHHHHHHHHHHhcC------
Confidence 555666778888865 79999999999999999999999999999999 7999998886665555444332211
Q ss_pred CCccCCCCcCcCCCCchhhHHHHHHHHHHHHhhchhhhhhhhhhhccCCCccchhhHHHHHHHHHHHHHHHHHHHHHhhh
Q 045564 146 PQRCDIGLSLCKAPSKVQFAVLYSGIALACLGLGGLRFTLATMGANQFEIPQHQGIFFNWFFILTYASTVISSAAFVYIE 225 (296)
Q Consensus 146 ~~~c~~~~~~~~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~~~ad~f~~~~~r~~~f~~~y~~~~iG~~i~p~v~~~l~ 225 (296)
+...+++..++.+++.++..+...++..|.+|++ .|++..++++...++|..++|.+.|++.
T Consensus 307 -----------------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~-~~g~~~g~~~~~~~~g~~~g~~~~g~l~ 368 (406)
T PRK11551 307 -----------------SFAGMLLAGFAAGLFVVGGQSVLYALAPLFYPTQ-VRGTGVGAAVAVGRLGSMAGPLLAGQLL 368 (406)
T ss_pred -----------------cHHHHHHHHHHHHHHHHhHHHHHHHHHHHHcchh-hhhhhhhHHHHhhhHHHHHHhhhHhhhh
Confidence 1233445556677777777888889999999844 7899999999999999999999999998
Q ss_pred ccc-cchhhHHHHHHHHHHHHHH
Q 045564 226 DNL-SWRLGSGLNIAANLAGVVI 247 (296)
Q Consensus 226 ~~~-gw~~~F~i~~~~~~~~~~~ 247 (296)
+.. +|...+++...+.+++.+.
T Consensus 369 ~~~~~~~~~~~~~~~~~~~~~~~ 391 (406)
T PRK11551 369 ALGRSTVGVIGASIPVILVAALA 391 (406)
T ss_pred ccCCchHHHHHHHHHHHHHHHHH
Confidence 764 4555566555554444433
No 116
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=99.34 E-value=1.3e-10 Score=111.63 Aligned_cols=160 Identities=8% Similarity=-0.027 Sum_probs=102.6
Q ss_pred hHHHhHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhcchHHHHHHHHHHHHHHHHHHHhhccccCCC
Q 045564 66 LGEGWVANLMVYMIQEFHITSINSALISNIVNGFVNLFPVLGAIIADSFLGSFQVIWISSFISLLGTILLDSTATFDSLR 145 (296)
Q Consensus 66 ~~y~~~~~l~~yl~~~lg~s~~~a~~i~~~~~~~~~~~~l~~G~laDr~iGR~~~i~i~~~l~~ig~~~la~~~~~p~~~ 145 (296)
.+|+...+++.|+.+.+|++..+++...++...+..++.++.|+++|| +|||+.+.++.++..+......... +..
T Consensus 258 ~~~~~~~~lp~~l~~~~g~s~~~~~~~~~i~~~~~~i~~~~~G~l~Dr-~grr~~~~~~~~~~~~~~~~~~~~~--~~~- 333 (432)
T PRK10406 258 CFYTFTTYMQKYLVNTAGMHANVASGIMTAALFVFMLIQPLIGALSDK-IGRRTSMLCFGSLAALFTVPILSAL--QNV- 333 (432)
T ss_pred HHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCchHHHHHHHHHHHHHHHHHHHHH--HcC-
Confidence 688888999999999999999888888888777888888899999999 7999988776654433222111100 000
Q ss_pred CCccCCCCcCcCCCCchhhHHHHHHHHHHHHhhchhhhhhhhhhhccCCCccchhhHHHHHHHHHH-HHHHHHHHHHHhh
Q 045564 146 PQRCDIGLSLCKAPSKVQFAVLYSGIALACLGLGGLRFTLATMGANQFEIPQHQGIFFNWFFILTY-ASTVISSAAFVYI 224 (296)
Q Consensus 146 ~~~c~~~~~~~~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~~~ad~f~~~~~r~~~f~~~y~~~~-iG~~i~p~v~~~l 224 (296)
.+....+....+..++.+...+...++.+|.||++ .|++++++.|...+ +++..+|.+.+++
T Consensus 334 ----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~fp~~-~r~t~~g~~~~~g~~~~g~~~p~~~~~l 396 (432)
T PRK10406 334 ----------------SSPYAAFGLVMCALLIVSFYTSISGILKAEMFPAQ-VRALGVGLSYAVANALFGGSAEYVALSL 396 (432)
T ss_pred ----------------CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC-ccchhhhHHHHHHHHHHHhHHHHHHHHH
Confidence 01111111112222333334455678889999954 79999999665545 4455678888866
Q ss_pred hcccc-chhhHHHHHHHHHHHHHH
Q 045564 225 EDNLS-WRLGSGLNIAANLAGVVI 247 (296)
Q Consensus 225 ~~~~g-w~~~F~i~~~~~~~~~~~ 247 (296)
. ..| |...+++.+++.+++++.
T Consensus 397 ~-~~g~~~~~~~~~~~~~~i~~~~ 419 (432)
T PRK10406 397 K-SIGMETAFFWYVTLMAVVAFLV 419 (432)
T ss_pred H-HhCCCcHHHHHHHHHHHHHHHH
Confidence 4 445 555566555555554444
No 117
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.32 E-value=5.2e-12 Score=118.32 Aligned_cols=144 Identities=12% Similarity=0.018 Sum_probs=129.5
Q ss_pred HhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhcchHHHHHHHHHHHHHHHHHHHhhccccCCCCCccCCCCcCcCCCC
Q 045564 81 EFHITSINSALISNIVNGFVNLFPVLGAIIADSFLGSFQVIWISSFISLLGTILLDSTATFDSLRPQRCDIGLSLCKAPS 160 (296)
Q Consensus 81 ~lg~s~~~a~~i~~~~~~~~~~~~l~~G~laDr~iGR~~~i~i~~~l~~ig~~~la~~~~~p~~~~~~c~~~~~~~~~~~ 160 (296)
.++.+.++.+++.....+...+..++.|.+.|| +|+|-.+++|.++....++++++..
T Consensus 100 ~~~~e~~~iG~LFaskA~~qllvnp~~G~l~~~-iGy~ipm~~Gl~vmf~sTilFafg~--------------------- 157 (464)
T KOG3764|consen 100 SLDRENTQIGLLFASKALVQLLVNPFFGNLIDR-IGYKIPMVAGLFVMFLSTILFAFGN--------------------- 157 (464)
T ss_pred CccccccchhHHHHHHHHHHHHhcccchhhHHH-hccccHHHHHHHHHHHHHHHHHHcc---------------------
Confidence 356677888999999999999999999999999 8999999999999998888877653
Q ss_pred chhhHHHHHHHHHHHHhhchhhhhhhhhhhccCCCccchhhHHHHHHHHHHHHHHHHHHHHHhhhccccchhhHHHHHHH
Q 045564 161 KVQFAVLYSGIALACLGLGGLRFTLATMGANQFEIPQHQGIFFNWFFILTYASTVISSAAFVYIEDNLSWRLGSGLNIAA 240 (296)
Q Consensus 161 ~~~~~~l~~~~~l~gig~g~~~~~~~~~~ad~f~~~~~r~~~f~~~y~~~~iG~~i~p~v~~~l~~~~gw~~~F~i~~~~ 240 (296)
+.++++++|.+.|+|.+....+..++++|.||++.+|++..++..-...+|-++||.++|.+.+..|.+.+|.+.+++
T Consensus 158 --sy~~l~vAR~LQgvgsA~~~tsglamlAd~f~~d~er~~vmGialgfislG~lvgPpfGGilYe~~Gk~aPFlVL~~v 235 (464)
T KOG3764|consen 158 --SYPMLFVARSLQGVGSAFADTSGLAMLADVFPEDNERGSVMGIALGFISLGVLVGPPFGGILYEFAGKSAPFLVLAIV 235 (464)
T ss_pred --hhHHHHHHHHHhhhhHHHHHhhhHHHHHHHcccchhhhHHHHHHHHHHhccceecCCcccchHhhcCCcCcHHHHHHH
Confidence 356899999999999999999999999999998888999999977788999999999999999999999999999997
Q ss_pred HHHHHHHH
Q 045564 241 NLAGVVIF 248 (296)
Q Consensus 241 ~~~~~~~~ 248 (296)
+++...+-
T Consensus 236 ~Lld~~L~ 243 (464)
T KOG3764|consen 236 LLLDGALQ 243 (464)
T ss_pred HHHHHHHH
Confidence 77765553
No 118
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.32 E-value=1.1e-10 Score=112.41 Aligned_cols=161 Identities=9% Similarity=0.000 Sum_probs=108.3
Q ss_pred hHHHhHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhc-c-hHHHHHHHHHHHHHHHHHHHhhccccC
Q 045564 66 LGEGWVANLMVYMIQEFHITSINSALISNIVNGFVNLFPVLGAIIADSFL-G-SFQVIWISSFISLLGTILLDSTATFDS 143 (296)
Q Consensus 66 ~~y~~~~~l~~yl~~~lg~s~~~a~~i~~~~~~~~~~~~l~~G~laDr~i-G-R~~~i~i~~~l~~ig~~~la~~~~~p~ 143 (296)
.++++..+++.|+.+++|++..+++...+.+.++..++.+++|+++||+. + |++......+...+..+.+.. .|.
T Consensus 258 ~~~~~~~~~p~~l~~~~g~s~~~a~~~~~~~~~~~~~g~~~~g~l~dr~~~~~r~~~~~~~~~~~~~~~~~~~~---~~~ 334 (434)
T PRK11663 258 VRAAINDWGNLYMSETLGVDLVTANSAVSMFELGGFIGALVAGWGSDKLFNGNRGPMNLIFAAGILLSVGSLWL---MPF 334 (434)
T ss_pred HHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHHHhhhHHHhccCCccHHHHHHHHHHHHHHHHHHH---ccc
Confidence 55567778999998899999999999999999999999999999999932 2 233222222111111111111 111
Q ss_pred CCCCccCCCCcCcCCCCchhhHHHHHHHHHHHHhhchhhhhhhhhhhccCCCccchhhHHHHHHHHHHHHHHHHHHHHHh
Q 045564 144 LRPQRCDIGLSLCKAPSKVQFAVLYSGIALACLGLGGLRFTLATMGANQFEIPQHQGIFFNWFFILTYASTVISSAAFVY 223 (296)
Q Consensus 144 ~~~~~c~~~~~~~~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~~~ad~f~~~~~r~~~f~~~y~~~~iG~~i~p~v~~~ 223 (296)
.+.....+..+..|++............+|.+| ++.|++..++.++..++|..++|.+.++
T Consensus 335 ------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~~~g~~~g~~~~~~~~g~~~~p~~~g~ 395 (434)
T PRK11663 335 ------------------ASYVMQAACFFTIGFFVFGPQMLIGMAAAECSH-KEAAGAATGFVGLFAYLGAALSGYPLAK 395 (434)
T ss_pred ------------------ccHHHHHHHHHHHHHHHhhHHHHHHHHHHhccc-HhhHHhHHHHHHHHHHHHHHHhcccHHH
Confidence 011122222233333222222334456788887 4478999999999999999999999999
Q ss_pred hhccccchhhHHHHHHHHHHHHHHH
Q 045564 224 IEDNLSWRLGSGLNIAANLAGVVIF 248 (296)
Q Consensus 224 l~~~~gw~~~F~i~~~~~~~~~~~~ 248 (296)
+.+.+||+..|++.+++.+++.+..
T Consensus 396 l~~~~g~~~~f~~~~~~~~~~~~~~ 420 (434)
T PRK11663 396 VLEIWHWTGFFVVISIAAGISALLL 420 (434)
T ss_pred HHHhcccHHHHHHHHHHHHHHHHHH
Confidence 9999999999998888766655444
No 119
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.32 E-value=1.9e-10 Score=112.81 Aligned_cols=164 Identities=11% Similarity=0.077 Sum_probs=116.9
Q ss_pred hHHHhHHHHHHHHHHHhCCChhHHHHHHH-HHHHHHHHHHHHHHHHhhhhcchHHHHHHHHHHHHHHHHHHHhhccccCC
Q 045564 66 LGEGWVANLMVYMIQEFHITSINSALISN-IVNGFVNLFPVLGAIIADSFLGSFQVIWISSFISLLGTILLDSTATFDSL 144 (296)
Q Consensus 66 ~~y~~~~~l~~yl~~~lg~s~~~a~~i~~-~~~~~~~~~~l~~G~laDr~iGR~~~i~i~~~l~~ig~~~la~~~~~p~~ 144 (296)
..+....+.++|+.+++|++..+.+.+.. ...++..++.+++|+++|| +||||.+.++.++..++.+........+
T Consensus 237 ~~~~~~~~~~~~l~~~~G~s~~~~g~~~~~~g~i~~iiG~ll~G~L~dr-~g~~~~l~i~~~l~~l~~l~~~~l~~~~-- 313 (491)
T PRK11010 237 GDAFAMSLTTTFLIRGVGFDAGEVGLVNKTLGLLATIVGALYGGILMQR-LSLFRALMIFGILQGVSNAGYWLLSITD-- 313 (491)
T ss_pred HHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhHHHHHHHHHHHHHHHHHHHHHHHhcc--
Confidence 44445567788888889999999998874 5567899999999999999 7999988777665555443322211000
Q ss_pred CCCccCCCCcCcCCCCchhhHHHHHHHHHHHHhhchhhhhhhhhhhccCCCccchhhHHHHHHHHHHHHHHHHHHHHHhh
Q 045564 145 RPQRCDIGLSLCKAPSKVQFAVLYSGIALACLGLGGLRFTLATMGANQFEIPQHQGIFFNWFFILTYASTVISSAAFVYI 224 (296)
Q Consensus 145 ~~~~c~~~~~~~~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~~~ad~f~~~~~r~~~f~~~y~~~~iG~~i~p~v~~~l 224 (296)
.+...+.+..++..+..|...+...++..++.++ +.+++.+++++...++|..+++.+.|++
T Consensus 314 -----------------~~~~~l~~~~~l~~~~~g~~~~~~~a~~~~l~~~-~~~~t~~gl~~s~~~lg~~~~~~~~G~l 375 (491)
T PRK11010 314 -----------------KNLYSMGAAVFFENLCGGMGTAAFVALLMTLCNK-SFSATQFALLSALSAVGRVYVGPVAGWF 375 (491)
T ss_pred -----------------ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC-CCcHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1122333334444444444445566777777774 3678889998888899999888899999
Q ss_pred hccccchhhHHHHHHHHHHHHHHHHh
Q 045564 225 EDNLSWRLGSGLNIAANLAGVVIFLS 250 (296)
Q Consensus 225 ~~~~gw~~~F~i~~~~~~~~~~~~~~ 250 (296)
.+.+||+..|.+.+++.+++++....
T Consensus 376 ~~~~G~~~~f~~~~~~~l~~l~~~~~ 401 (491)
T PRK11010 376 VEAHGWPTFYLFSVAAAVPGLLLLLV 401 (491)
T ss_pred HHHhChHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999988887777665544
No 120
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=99.32 E-value=1.4e-10 Score=107.27 Aligned_cols=148 Identities=13% Similarity=0.042 Sum_probs=114.1
Q ss_pred hHHHhHHHHHHHHHHH--hCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhcchHHHHHHHHHHHHHHHHHHHhhccccC
Q 045564 66 LGEGWVANLMVYMIQE--FHITSINSALISNIVNGFVNLFPVLGAIIADSFLGSFQVIWISSFISLLGTILLDSTATFDS 143 (296)
Q Consensus 66 ~~y~~~~~l~~yl~~~--lg~s~~~a~~i~~~~~~~~~~~~l~~G~laDr~iGR~~~i~i~~~l~~ig~~~la~~~~~p~ 143 (296)
.--++..+.+.|+.+. +|++..+++...+.+.++..++.+++++++|| +|+||.+.++.++..++.++.....
T Consensus 155 ~e~~~~~w~~~yl~~~~~~g~s~~~a~~~~s~~~~~~~iGr~~~~~l~~r-~g~~~~l~~~~~l~~~~~~l~~~~~---- 229 (310)
T TIGR01272 155 AEVSAGSFLVNFLSDPHALGLPEDQAAHFTAYTWGGAMVGRFIGSAVMPM-ISQGRYLAFNAFLAVLLSIGAALTH---- 229 (310)
T ss_pred HHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCHHHHHHHHHHHHHHHHHHHHHcC----
Confidence 3445667899999854 79999999999999999999999999999999 7999999888877776654333221
Q ss_pred CCCCccCCCCcCcCCCCchhhHHHHHHHHHHHHhhchhhhhhhhhhhccCCCccchhhHHHHHHHHHHHHHHHHHHHHHh
Q 045564 144 LRPQRCDIGLSLCKAPSKVQFAVLYSGIALACLGLGGLRFTLATMGANQFEIPQHQGIFFNWFFILTYASTVISSAAFVY 223 (296)
Q Consensus 144 ~~~~~c~~~~~~~~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~~~ad~f~~~~~r~~~f~~~y~~~~iG~~i~p~v~~~ 223 (296)
+.. ...+.++.+++.+...|...+...+.+|++..++++ +. ....+|+.+.|.+.|+
T Consensus 230 -------------------~~~-~~~~~~l~g~~~s~i~P~~~s~a~~~~~~~~~~asa--i~-~~~~~Gg~i~P~l~G~ 286 (310)
T TIGR01272 230 -------------------GYV-AMWFVLALGLFNSIMFPTIFSLALNALGRHTSQGSG--IL-CLAIVGGAIVPLLQGS 286 (310)
T ss_pred -------------------CHH-HHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhHH--HH-HHHHhcchHHHHHHHH
Confidence 011 123455788999999999999998988854344444 33 4556899999999999
Q ss_pred hhccccchhhHHHHHHHH
Q 045564 224 IEDNLSWRLGSGLNIAAN 241 (296)
Q Consensus 224 l~~~~gw~~~F~i~~~~~ 241 (296)
+.|..|.+.+|++..++.
T Consensus 287 lad~~g~~~a~~v~~~~~ 304 (310)
T TIGR01272 287 LADCLGIQLAFALPVPCY 304 (310)
T ss_pred HHHhccchHHHHHHHHHH
Confidence 999889888988666644
No 121
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.31 E-value=2.8e-11 Score=117.91 Aligned_cols=145 Identities=22% Similarity=0.185 Sum_probs=127.4
Q ss_pred HhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhcchHHHHHHHHHHHHHHHHHHHhhccccCCCCCccCCCCcCcCCCC
Q 045564 81 EFHITSINSALISNIVNGFVNLFPVLGAIIADSFLGSFQVIWISSFISLLGTILLDSTATFDSLRPQRCDIGLSLCKAPS 160 (296)
Q Consensus 81 ~lg~s~~~a~~i~~~~~~~~~~~~l~~G~laDr~iGR~~~i~i~~~l~~ig~~~la~~~~~p~~~~~~c~~~~~~~~~~~ 160 (296)
++.+++.+-+.+.+.+..+..++++.+|+++|| +|-|+++.++.++.++++++..+++..
T Consensus 67 ~~~ws~~~k~~i~ss~~~G~i~~~iP~g~l~~k-~G~r~v~~~~~~~sa~~t~l~P~aa~~------------------- 126 (466)
T KOG2532|consen 67 EYDWSSTEKGLIFSSFFWGYILGQIPGGYLADK-FGARRVFFISGLISALLTLLTPLAASI------------------- 126 (466)
T ss_pred eecCCHHHHHHHHHHHHHHHHHHHcCcHHHHHH-cCchHHHHHHHHHHHHHHHHHHHHHHh-------------------
Confidence 577889999999999999999999999999999 799999999999999988888776521
Q ss_pred chhhHHHHHHHHHHHHhhchhhhhhhhhhhccCCCccchhhHHHHHHHHHHHHHHHHHHHHHhhhcc-ccchhhHHHHHH
Q 045564 161 KVQFAVLYSGIALACLGLGGLRFTLATMGANQFEIPQHQGIFFNWFFILTYASTVISSAAFVYIEDN-LSWRLGSGLNIA 239 (296)
Q Consensus 161 ~~~~~~l~~~~~l~gig~g~~~~~~~~~~ad~f~~~~~r~~~f~~~y~~~~iG~~i~p~v~~~l~~~-~gw~~~F~i~~~ 239 (296)
+...+++.|+++|++.|...|++..+.+...|.. +|++..++.+.+..+|.+++-.++|++.+. .||+++|++.++
T Consensus 127 --~~~~~~~~R~lqGl~~g~~~pa~~~i~~~W~P~~-Ers~~~ail~~g~q~g~v~~mp~sg~lc~s~~GW~sifY~~g~ 203 (466)
T KOG2532|consen 127 --GFYLLLVLRFLQGLGQGVLFPAIGSILAKWAPPN-ERSTFIAILTAGSQLGTIITMPVSGLLCESSLGWPSIFYVFGI 203 (466)
T ss_pred --cchhhHHHHHHhHHHHhHHHhhhhceeeeECCHH-HHHHHHHHHHHHHHHHHHHHHHhHHHHhccCCCCchHHHHHHH
Confidence 2346788999999999999999999999999944 689999998888889999999999999988 899999999888
Q ss_pred HHHHHHHHH
Q 045564 240 ANLAGVVIF 248 (296)
Q Consensus 240 ~~~~~~~~~ 248 (296)
+..+-.+++
T Consensus 204 ~g~i~~~~w 212 (466)
T KOG2532|consen 204 VGLIWFILW 212 (466)
T ss_pred HHHHHHHHH
Confidence 666555443
No 122
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.31 E-value=3.8e-10 Score=106.69 Aligned_cols=154 Identities=10% Similarity=0.013 Sum_probs=125.9
Q ss_pred hHHHhHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhcchHHHHHHHHHHHHHHHHHHHhhccccCCC
Q 045564 66 LGEGWVANLMVYMIQEFHITSINSALISNIVNGFVNLFPVLGAIIADSFLGSFQVIWISSFISLLGTILLDSTATFDSLR 145 (296)
Q Consensus 66 ~~y~~~~~l~~yl~~~lg~s~~~a~~i~~~~~~~~~~~~l~~G~laDr~iGR~~~i~i~~~l~~ig~~~la~~~~~p~~~ 145 (296)
..+...++.+.|+++ +|.+..+.+.+.++..++..++.++.+++.|| +|+|+.+.++.+...++.+.++.+.
T Consensus 220 ~~~~~~~~~~~~l~~-~g~s~~~~g~l~~~~~~~~i~~~~~~~~l~~r-~g~~~~l~~~~~~~~~~~~~~~~~~------ 291 (382)
T TIGR00902 220 AHAAYYGFSAIYWQA-AGISASATGLLWGIGVLAEIIIFAFSNKLFQN-CSARDLLLISAIACVGRWAIIGAIE------ 291 (382)
T ss_pred HHHHHHHHHHHHHHH-CCCCHhHHHHHHHHHHHHHHHHHHHhHHHHhh-CCHHHHHHHHHHHHHHHHHHHHhHh------
Confidence 555566788889964 89999999999888899999999999999999 7999999999999988877665432
Q ss_pred CCccCCCCcCcCCCCchhhHHHHHHHHHHHHhhchhhhhhhhhhhccCCCccchhhHHHHHH-HHHHHHHHHHHHHHHhh
Q 045564 146 PQRCDIGLSLCKAPSKVQFAVLYSGIALACLGLGGLRFTLATMGANQFEIPQHQGIFFNWFF-ILTYASTVISSAAFVYI 224 (296)
Q Consensus 146 ~~~c~~~~~~~~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~~~ad~f~~~~~r~~~f~~~y-~~~~iG~~i~p~v~~~l 224 (296)
+.+.+++...+.++..|...+....++.+. |++ .|+++.+.++ ++..+|..++|.++|++
T Consensus 292 -----------------~~~~~~~~q~l~g~~~~~~~~~~~~~i~~~-~~~-~~~~~q~~~~~~~~g~g~~~g~~~~G~l 352 (382)
T TIGR00902 292 -----------------AFPLIFLLQILHCGTFAVCHLAAMRYIAAQ-PGS-EIAKLQALYNALAMGGLIAIFTAFAGFI 352 (382)
T ss_pred -----------------hHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CHh-hHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345677778999999999999999999987 744 5778888865 46678999999999999
Q ss_pred hccccchhhHHHHHHHHHHHHHH
Q 045564 225 EDNLSWRLGSGLNIAANLAGVVI 247 (296)
Q Consensus 225 ~~~~gw~~~F~i~~~~~~~~~~~ 247 (296)
.|.+|+ ..|++.+++.++++++
T Consensus 353 ~~~~g~-~~~~~~~~~~~~~~~~ 374 (382)
T TIGR00902 353 YPTLGA-GTFVFMAIIAAAAFFL 374 (382)
T ss_pred HHhccH-HHHHHHHHHHHHHHHH
Confidence 999886 5677777766665543
No 123
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=99.31 E-value=2.4e-10 Score=111.84 Aligned_cols=168 Identities=14% Similarity=0.129 Sum_probs=135.3
Q ss_pred H-hHHHhHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhcchH--HHHHHHHHHHHHHHHHHHhhccc
Q 045564 65 T-LGEGWVANLMVYMIQEFHITSINSALISNIVNGFVNLFPVLGAIIADSFLGSF--QVIWISSFISLLGTILLDSTATF 141 (296)
Q Consensus 65 ~-~~y~~~~~l~~yl~~~lg~s~~~a~~i~~~~~~~~~~~~l~~G~laDr~iGR~--~~i~i~~~l~~ig~~~la~~~~~ 141 (296)
+ +..++.+....|.++++|++..+...+..+..+...++.+++|++.|| +|-| ++++++.+++.+-.+.-.+ .+.
T Consensus 294 ~dg~~ti~~~~~i~a~~~lg~s~~~l~~~~l~~~i~a~~Ga~~~g~l~~r-~g~k~~~~l~~~l~~~~~i~~~g~~-G~~ 371 (477)
T PF11700_consen 294 SDGVNTIISFAGIYATEVLGMSTTQLIVFGLVVQIVAIIGALLFGWLQDR-FGPKTKRTLLISLILWIIIPLYGLF-GFW 371 (477)
T ss_pred HHHHHHHHHHHHHHHHHhcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCCchhHHHHHHHHHHHHHHHHHHH-Hhh
Confidence 7 888888999999999999999999989999999999999999999999 7988 8888887766432222111 101
Q ss_pred cCCCCCccCCCCcCcCCCCchhhHHHHHHHHHHHHhhchhhhhhhhhhhccCCCccchhhHHHHHHHHHHHHHHHHHHHH
Q 045564 142 DSLRPQRCDIGLSLCKAPSKVQFAVLYSGIALACLGLGGLRFTLATMGANQFEIPQHQGIFFNWFFILTYASTVISSAAF 221 (296)
Q Consensus 142 p~~~~~~c~~~~~~~~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~~~ad~f~~~~~r~~~f~~~y~~~~iG~~i~p~v~ 221 (296)
+... . ..+.+.+++.-++.|+..|+.++..-++.+++.|+ ++.+.+|++|.+..-..+.+||++.
T Consensus 372 ~~~~-----------g---~~~~~~f~~~a~~~G~~~G~~qs~sRs~~~~LiP~-g~e~efFgly~i~gk~ss~lGPll~ 436 (477)
T PF11700_consen 372 PSFF-----------G---LKSPWEFWVLAVLIGLFMGGIQSASRSLFSRLIPP-GREAEFFGLYAITGKASSWLGPLLF 436 (477)
T ss_pred hccc-----------C---cccHHHHHHHHHHHHHHhhhHHHHHHHHHHHhCCC-chhhHHHHHHHHHHHHHHHHHHHHH
Confidence 1100 0 12345677777789999999999999999999994 4679999999999999999999999
Q ss_pred Hhhhcccc-chhhHHHHHHHHHHHHHHHH
Q 045564 222 VYIEDNLS-WRLGSGLNIAANLAGVVIFL 249 (296)
Q Consensus 222 ~~l~~~~g-w~~~F~i~~~~~~~~~~~~~ 249 (296)
|.+.+.+| -|+++....++.+++++++.
T Consensus 437 g~i~~~tg~~r~g~~~l~~lf~~gl~ll~ 465 (477)
T PF11700_consen 437 GLITDATGSQRYGFLFLLVLFLIGLILLF 465 (477)
T ss_pred HHHHHHhCCchhHHHHHHHHHHHHHHHHh
Confidence 99998876 78999888888877777653
No 124
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.30 E-value=6.3e-11 Score=113.13 Aligned_cols=164 Identities=10% Similarity=0.065 Sum_probs=119.3
Q ss_pred HHhHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhh---cchHH-HHHHHHHHHHHHHHHHHhhccccC
Q 045564 68 EGWVANLMVYMIQEFHITSINSALISNIVNGFVNLFPVLGAIIADSF---LGSFQ-VIWISSFISLLGTILLDSTATFDS 143 (296)
Q Consensus 68 y~~~~~l~~yl~~~lg~s~~~a~~i~~~~~~~~~~~~l~~G~laDr~---iGR~~-~i~i~~~l~~ig~~~la~~~~~p~ 143 (296)
.....+++.|+++++|++..+++.+.++..+...+..++.|+++||. +|||| .++++.+...++.+++... |.
T Consensus 16 ~~~~~~l~~~~~~~~g~s~~~~g~i~~~~~i~~~i~~p~~G~lsDr~~~r~Grrr~~i~~~~~~~~i~~~~~~~~---~~ 92 (437)
T TIGR00792 16 AIVSTYLLFFYTDVLGLSAAFVGTLFLVARILDAITDPIMGNIVDRTRTRWGKFRPWLLIGAIPFSIVLVLLFTT---PD 92 (437)
T ss_pred HHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHhccchheEeeecCCCCCCCcchhHHHhHHHHHHHHHHHHhC---CC
Confidence 33556788899999999999999999999999999999999999983 58855 5667777777766655432 22
Q ss_pred CCCCccCCCCcCcCCCCchhhHHHHHHHHHHHHhhchhhhhhhhhhhccCCCccchhhHHHHHHHHHHHHHHHHHHHHHh
Q 045564 144 LRPQRCDIGLSLCKAPSKVQFAVLYSGIALACLGLGGLRFTLATMGANQFEIPQHQGIFFNWFFILTYASTVISSAAFVY 223 (296)
Q Consensus 144 ~~~~~c~~~~~~~~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~~~ad~f~~~~~r~~~f~~~y~~~~iG~~i~p~v~~~ 223 (296)
.. .......+++.+++.+++.+....+..++.+|+.+++++|.+..++.....++|+.+++.+.+.
T Consensus 93 ~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~R~~~~~~~~~~~~~g~~l~~~~~~~ 158 (437)
T TIGR00792 93 FS--------------ATGKLVYAYITYILLGLFYSFVNIPYWSLVPAITLDPRERESLSTFRRFGATLGGLLVAVIVLP 158 (437)
T ss_pred CC--------------cchHHHHHHHHHHHHHHHHHhhcccHhhCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 10 0112344555667777887777777788888988655578888888778888887777665554
Q ss_pred hh-------ccccchhhHHHHHHHHHHHHHHH
Q 045564 224 IE-------DNLSWRLGSGLNIAANLAGVVIF 248 (296)
Q Consensus 224 l~-------~~~gw~~~F~i~~~~~~~~~~~~ 248 (296)
+. +..+|++.+.+.+++..+..++.
T Consensus 159 l~~~~~~~~~~~g~~~~~~i~~~l~~~~~~~~ 190 (437)
T TIGR00792 159 LVSYFGGGDDKFGWFMFALVLALIGVVSLIIC 190 (437)
T ss_pred HHHHhCCCcccccHHHHHHHHHHHHHHHHHHH
Confidence 43 24589999888877665554443
No 125
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=99.30 E-value=3e-10 Score=108.03 Aligned_cols=153 Identities=12% Similarity=0.086 Sum_probs=117.2
Q ss_pred hHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhc-----chHH-HHHHHHHHHHHHHHHHHhhccccC
Q 045564 70 WVANLMVYMIQEFHITSINSALISNIVNGFVNLFPVLGAIIADSFL-----GSFQ-VIWISSFISLLGTILLDSTATFDS 143 (296)
Q Consensus 70 ~~~~l~~yl~~~lg~s~~~a~~i~~~~~~~~~~~~l~~G~laDr~i-----GR~~-~i~i~~~l~~ig~~~la~~~~~p~ 143 (296)
...-+|.|+.+ .|+|.++.+.+..+... .+..++.|+++|| + |||| .+.++.++..++..++.+.. +
T Consensus 18 ~~~~~~~~l~~-~g~~~~~ig~~~~~~~~--~~~~~l~g~~~Dr-~~~~~~g~rr~~l~~~~~~~~l~~~~l~~~~--~- 90 (402)
T PRK11902 18 TSGTLQAWMTV-EGLDIQTIGFFSLVGQA--YIFKFLWAPLMDR-YTPPLLGRRRGWLLLTQVGLAASIAAMAFCP--P- 90 (402)
T ss_pred HHHHHHHHHHH-cCCCHHHHHHHHHHHHH--HHHHHHHHHHHHc-ccccCCCcchhHHHHHHHHHHHHHHHHHhcC--c-
Confidence 45677888875 59999999988666554 6889999999999 7 8876 67777777766666554431 1
Q ss_pred CCCCccCCCCcCcCCCCchhhHHHHHHHHHHHHhhchhhhhhhhhhhccCCCccchhhHHHHHHHHHHHHHHHHHHHHHh
Q 045564 144 LRPQRCDIGLSLCKAPSKVQFAVLYSGIALACLGLGGLRFTLATMGANQFEIPQHQGIFFNWFFILTYASTVISSAAFVY 223 (296)
Q Consensus 144 ~~~~~c~~~~~~~~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~~~ad~f~~~~~r~~~f~~~y~~~~iG~~i~p~v~~~ 223 (296)
..+.+.+++..++.++..+...+...++..|.+|+ ++|+++.++..++.++|..+++.+.++
T Consensus 91 -----------------~~~~~~l~~~~~~~~~~~~~~~~~~~al~~~~~~~-~~r~~~~~~~~~g~~~g~i~g~~l~~~ 152 (402)
T PRK11902 91 -----------------HAALWPLAGLAVLVAFLSASQDIVFDAYSTDVLHP-EERGAGAAVKVLGYRLAMLVSGGLALW 152 (402)
T ss_pred -----------------cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCh-hhhhHHHHHHHHHHHHHHHHHhHHHHH
Confidence 12345556666667788888889999999999984 468899998888889999999999998
Q ss_pred hhcc-ccchhhHHHHHHHHHHHHHH
Q 045564 224 IEDN-LSWRLGSGLNIAANLAGVVI 247 (296)
Q Consensus 224 l~~~-~gw~~~F~i~~~~~~~~~~~ 247 (296)
+.+. .|||..|++.++..++..+.
T Consensus 153 l~~~~~gw~~~f~i~a~~~l~~~l~ 177 (402)
T PRK11902 153 LADRVLGWGNTYLLMAGLMLAGALT 177 (402)
T ss_pred HHhcccCHHHHHHHHHHHHHHHHHH
Confidence 8875 59999999988765554443
No 126
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=99.29 E-value=1.8e-10 Score=112.52 Aligned_cols=179 Identities=17% Similarity=0.058 Sum_probs=120.1
Q ss_pred hHHHh-HHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhh---hcchHHHHHHH-HHHHHHHHHHHHhhcc
Q 045564 66 LGEGW-VANLMVYMIQEFHITSINSALISNIVNGFVNLFPVLGAIIADS---FLGSFQVIWIS-SFISLLGTILLDSTAT 140 (296)
Q Consensus 66 ~~y~~-~~~l~~yl~~~lg~s~~~a~~i~~~~~~~~~~~~l~~G~laDr---~iGR~~~i~i~-~~l~~ig~~~la~~~~ 140 (296)
..|+. .++++.|+ +++|.+...++.+..+..+...+..++.|++||| .+||||.++++ .+...++.+++..+..
T Consensus 18 ~~~~l~~~~l~~yl-~~lg~~~~~~~~i~~~~~l~~~i~~Pi~G~lSDr~~sr~GRRrp~il~g~~~~~~~l~ll~~~~~ 96 (477)
T TIGR01301 18 FGWALQLSLLTPYV-QELGIPHAWASIIWLCGPLSGLLVQPLVGYLSDRCTSRFGRRRPFIAAGAALVAFAVILIGFAAD 96 (477)
T ss_pred HHHHHHHHHHHHHH-HHcCCCHHHHHHHHHHHHHHHHHHHhHeeehhcCCCCCCCChHHHHHHHHHHHHHHHHHHHhCch
Confidence 34444 44555554 7899999999999999999999999999999994 27999998875 5555555555544321
Q ss_pred ccCCCCCccCCCCcCcCCCCchhhHHHHHHHHHHHHhhchhhhhhhhhhhccCCCccch-hhHHHHHHHHHHHHHHHHHH
Q 045564 141 FDSLRPQRCDIGLSLCKAPSKVQFAVLYSGIALACLGLGGLRFTLATMGANQFEIPQHQ-GIFFNWFFILTYASTVISSA 219 (296)
Q Consensus 141 ~p~~~~~~c~~~~~~~~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~~~ad~f~~~~~r-~~~f~~~y~~~~iG~~i~p~ 219 (296)
...... +.............+.++..+.-++.....+...++++|+.|++++| +.++++.....++|+.+|+.
T Consensus 97 ~~~~~~------~~~~~~~~~~~i~~~~i~~~lld~~~n~~~~p~rALiaDl~p~~~~~~~~a~~~~~~~~~lG~ilg~~ 170 (477)
T TIGR01301 97 IGHLFG------DNLDKKTKPRAIIVFVVGFWILDVANNMLQGPCRAFLADLTGGDARRTRIANAYFSFFMAIGNVLGYA 170 (477)
T ss_pred hhhhcc------ccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCchhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 100000 00000000111233445555666778888888999999999955433 57888899999999999999
Q ss_pred HHHhh--hcc-------------ccchhhHHHHHHHHHHHHHHHHhC
Q 045564 220 AFVYI--EDN-------------LSWRLGSGLNIAANLAGVVIFLSG 251 (296)
Q Consensus 220 v~~~l--~~~-------------~gw~~~F~i~~~~~~~~~~~~~~~ 251 (296)
++++. .+. .+.++.|++.++++++..++.+..
T Consensus 171 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~F~i~a~~l~i~~l~t~~~ 217 (477)
T TIGR01301 171 AGAYSGLYKIFPFTKTEACGVSCANLKSCFLIDIILLAILTYIALSA 217 (477)
T ss_pred HHHHHhHHHhcccccccccccccchHHHHHHHHHHHHHHHHHHHeee
Confidence 88765 211 156888999888777766654443
No 127
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.28 E-value=1.9e-10 Score=108.56 Aligned_cols=149 Identities=13% Similarity=-0.031 Sum_probs=109.5
Q ss_pred HHHhHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhcchH----HHHHHHHHHHHHHHHHHHhhcccc
Q 045564 67 GEGWVANLMVYMIQEFHITSINSALISNIVNGFVNLFPVLGAIIADSFLGSF----QVIWISSFISLLGTILLDSTATFD 142 (296)
Q Consensus 67 ~y~~~~~l~~yl~~~lg~s~~~a~~i~~~~~~~~~~~~l~~G~laDr~iGR~----~~i~i~~~l~~ig~~~la~~~~~p 142 (296)
.......++.|+ +++|.|..+.+++++++.+...++.+++|+++|| +||+ +.+.+...+..+ ......
T Consensus 20 ~g~~~p~l~~~l-~~~g~s~~~iG~~~~~~~l~~~l~~~~~g~l~dr-~g~~~~~~~~~~~~~~~~~~---~~~~~~--- 91 (382)
T PRK11128 20 YGVFLPFWSVWL-KGQGYTPETIGLLLGAGLVARFLGSLLIAPRVKD-PSQLIPALRLLALLTLLFAV---AFWFGA--- 91 (382)
T ss_pred HHHHhhhHHHHH-HhcCCCHHHHHHHHHHHHHHHHhhhHHHHHHHhh-hcchHHHHHHHHHHHHHHHH---HHHHhc---
Confidence 333456777888 4589999999999999999999999999999999 7984 333222221111 111110
Q ss_pred CCCCCccCCCCcCcCCCCchhhHHHHHHHHHHHHhhchhhhhhhhhhhccCCCccchhhHHHHHHHHHHHHHHHHHHHHH
Q 045564 143 SLRPQRCDIGLSLCKAPSKVQFAVLYSGIALACLGLGGLRFTLATMGANQFEIPQHQGIFFNWFFILTYASTVISSAAFV 222 (296)
Q Consensus 143 ~~~~~~c~~~~~~~~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~~~ad~f~~~~~r~~~f~~~y~~~~iG~~i~p~v~~ 222 (296)
.+.+.+++.|++.+++.+...+...++..+..+ +|+..++...+..++|..+||.+++
T Consensus 92 -------------------~~~~~l~i~~~l~g~~~~~~~~~~~a~~~~~~~---~~~~a~~~~~~~~~lg~~igp~lgg 149 (382)
T PRK11128 92 -------------------HSFWLLFVAIGLFNLFFSPLVPLTDALANTWQK---QIGLDYGKVRLWGSIAFVIGSALTG 149 (382)
T ss_pred -------------------ccHHHHHHHHHHHHHHHcccccHHHHHHHHHHh---hccCCcchHHHHHHHHHHHHHHHHH
Confidence 135677788999999888888887777776532 3556677767788999999999999
Q ss_pred hhhccccchhhHHHHHHHHHHHH
Q 045564 223 YIEDNLSWRLGSGLNIAANLAGV 245 (296)
Q Consensus 223 ~l~~~~gw~~~F~i~~~~~~~~~ 245 (296)
++.+++|||..|++.++..++..
T Consensus 150 ~l~~~~g~~~~f~~~~~~~~~~~ 172 (382)
T PRK11128 150 KLVSWFGEQAILWILTAGVASML 172 (382)
T ss_pred HHHHHcChhHHHHHHHHHHHHHH
Confidence 99999999999988776544443
No 128
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.28 E-value=6.9e-11 Score=114.92 Aligned_cols=145 Identities=14% Similarity=0.133 Sum_probs=117.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhcchHHHHHHHHHHHHHHHHHHHhhccccCCCCCccCCCCcCcCCCCchhhHHHHH
Q 045564 90 ALISNIVNGFVNLFPVLGAIIADSFLGSFQVIWISSFISLLGTILLDSTATFDSLRPQRCDIGLSLCKAPSKVQFAVLYS 169 (296)
Q Consensus 90 ~~i~~~~~~~~~~~~l~~G~laDr~iGR~~~i~i~~~l~~ig~~~la~~~~~p~~~~~~c~~~~~~~~~~~~~~~~~l~~ 169 (296)
+.+++++.++.++|..++|+++|| +|||.++.++.++..++.++..++... ....++++
T Consensus 63 S~~vs~f~iG~~~Gs~~~~~la~~-~GRK~~l~~~~~l~~~~~~~~~~s~~~--------------------~~~e~li~ 121 (485)
T KOG0569|consen 63 SLIVSIFFIGGMIGSFSSGLLADR-FGRKNALLLSNLLAVLAALLMGLSKSA--------------------PSFEMLIL 121 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHh-hcchHHHHHHHHHHHHHHHHHHHHHHh--------------------hhHHHHHH
Confidence 457889999999999999999999 799999999999888887777766422 23568999
Q ss_pred HHHHHHHhhchhhhhhhhhhhccCCCccchhhHHHHHHHHHHHHHHHHHHHH-Hhhh-ccccchhhHHHHHHHHHHHHH-
Q 045564 170 GIALACLGLGGLRFTLATMGANQFEIPQHQGIFFNWFFILTYASTVISSAAF-VYIE-DNLSWRLGSGLNIAANLAGVV- 246 (296)
Q Consensus 170 ~~~l~gig~g~~~~~~~~~~ad~f~~~~~r~~~f~~~y~~~~iG~~i~p~v~-~~l~-~~~gw~~~F~i~~~~~~~~~~- 246 (296)
+|++.|+..|......+-++.|.-| ++.||..-....++.++|.+++..++ ..+. +...|++.+.+..+..++.++
T Consensus 122 GR~i~Gl~~gl~~~~~pmyl~E~sP-~~~RG~~g~~~~~~~~~g~ll~~~~~l~~ilGt~~~W~~l~~~~~i~~~~~l~~ 200 (485)
T KOG0569|consen 122 GRLIVGLACGLSTGLVPMYLTEISP-KNLRGALGTLLQIGVVIGILLGQVLGLPSLLGTEDLWPYLLAFPLIPALLQLAL 200 (485)
T ss_pred HHHHHHHHhHHHHHHHHHHHhhcCh-hhhccHHHHHHHHHHHHHHHHHHHHccHHhcCCCcchHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999 45788877778888889988885443 3443 445799999988885555443
Q ss_pred -HHHhCCCchh
Q 045564 247 -IFLSGKHFYF 256 (296)
Q Consensus 247 -~~~~~~~~~~ 256 (296)
.+++++|||.
T Consensus 201 l~~~PESPk~L 211 (485)
T KOG0569|consen 201 LPFLPESPKYL 211 (485)
T ss_pred HhcCCCCcchH
Confidence 4578899997
No 129
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.26 E-value=2.3e-10 Score=111.76 Aligned_cols=162 Identities=9% Similarity=-0.061 Sum_probs=104.5
Q ss_pred hHHHhHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhcchHH-----HHHHHHHHHHHHHHHHHhhcc
Q 045564 66 LGEGWVANLMVYMIQEFHITSINSALISNIVNGFVNLFPVLGAIIADSFLGSFQ-----VIWISSFISLLGTILLDSTAT 140 (296)
Q Consensus 66 ~~y~~~~~l~~yl~~~lg~s~~~a~~i~~~~~~~~~~~~l~~G~laDr~iGR~~-----~i~i~~~l~~ig~~~la~~~~ 140 (296)
..++...+++.|+.+++|++..+++.+.++..++..++.+++|+++|| +|||+ ...........+...+.+.
T Consensus 267 ~~~~~~~~~p~~l~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr-~~~r~~~~~r~~~~~~~~~l~~i~~~~~~-- 343 (476)
T PLN00028 267 VELTMDNIIAEYFYDRFGLSLETAGAIAASFGLMNLFARPAGGYLSDV-AARRFGMRGRLWALWIVQTLGGVFCIWLG-- 343 (476)
T ss_pred HHHHHHhHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHH-HHHhcCcchhHHHHHHHHHHHHHHHHHhc--
Confidence 445566778999998999999999999999999999999999999999 78762 2221111111111111111
Q ss_pred ccCCCCCccCCCCcCcCCCCchhhHHHHHHHHHHHHhhchhhhhhhhhhhccCCCccchhhHHHHHHHHHHHHHHHHHHH
Q 045564 141 FDSLRPQRCDIGLSLCKAPSKVQFAVLYSGIALACLGLGGLRFTLATMGANQFEIPQHQGIFFNWFFILTYASTVISSAA 220 (296)
Q Consensus 141 ~p~~~~~~c~~~~~~~~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~~~ad~f~~~~~r~~~f~~~y~~~~iG~~i~p~v 220 (296)
.. .+.....+..++.+++.+...+...+...+..| + .++...++.+.+.++|+.++|.+
T Consensus 344 --~~-----------------~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~-~-~~g~~~g~~~~~g~lg~~i~~~l 402 (476)
T PLN00028 344 --RA-----------------NSLGAAIVVMILFSIFVQAACGATFGIVPFVSR-R-SLGVISGLTGAGGNVGAVLTQLL 402 (476)
T ss_pred --cc-----------------chHHHHHHHHHHHHHHHHHhhhhhcccCcccCh-h-hchhhhhhhhccccHHHHHHHHH
Confidence 10 112333344445555555555555666666655 3 57888888777777777777765
Q ss_pred HHhhhccccchhhHHHHHHHHHHHHHHHHhCC
Q 045564 221 FVYIEDNLSWRLGSGLNIAANLAGVVIFLSGK 252 (296)
Q Consensus 221 ~~~l~~~~gw~~~F~i~~~~~~~~~~~~~~~~ 252 (296)
.+ ..+..+|+.+|++.+++.+++.++.+..+
T Consensus 403 ~~-~~~~~~y~~~f~~~~~~~~i~~~~~~~~~ 433 (476)
T PLN00028 403 FF-TGSSYSTETGISLMGVMIIACTLPVAFIH 433 (476)
T ss_pred HH-hcCCccHhhHHHHHHHHHHHHHHHHHhee
Confidence 44 22344699999998887777766655444
No 130
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.25 E-value=6.4e-10 Score=105.14 Aligned_cols=146 Identities=10% Similarity=-0.014 Sum_probs=107.5
Q ss_pred hHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhcchHHHHHHHHHHH-HHHHHHHHhhccccCCCCCc
Q 045564 70 WVANLMVYMIQEFHITSINSALISNIVNGFVNLFPVLGAIIADSFLGSFQVIWISSFIS-LLGTILLDSTATFDSLRPQR 148 (296)
Q Consensus 70 ~~~~l~~yl~~~lg~s~~~a~~i~~~~~~~~~~~~l~~G~laDr~iGR~~~i~i~~~l~-~ig~~~la~~~~~p~~~~~~ 148 (296)
...+++.|+ +++|.|..+.+.+.+++.....+++++.|+++|| +||++.......+. .+..+.+....
T Consensus 23 ~~p~l~~~l-~~~g~s~~~ig~~~s~~~~~~~~~~~~~g~l~d~-~~~~~~~~~~~~~~~~l~~~~~~~~~--------- 91 (382)
T TIGR00902 23 FLPFFPAWL-KGIGLGEEMIGLLIGAALIARFAGGLFFAPLIKD-ANHIIIALRLLALASAIFAAAFSAGA--------- 91 (382)
T ss_pred HHHHHHHHH-HHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cCcHHHHHHHHHHHHHHHHHHHHHhh---------
Confidence 446677777 5789999999999999999999999999999999 79854332221111 11111111111
Q ss_pred cCCCCcCcCCCCchhhHHHHHHHHHHHHhhchhhhhhhhhhhccCCCccchhhHHHHHHHHHHHHHHHHHHHHHhhhccc
Q 045564 149 CDIGLSLCKAPSKVQFAVLYSGIALACLGLGGLRFTLATMGANQFEIPQHQGIFFNWFFILTYASTVISSAAFVYIEDNL 228 (296)
Q Consensus 149 c~~~~~~~~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~~~ad~f~~~~~r~~~f~~~y~~~~iG~~i~p~v~~~l~~~~ 228 (296)
.+.+.+++.+.+.+.+.+...|...++..+ ++ ++|+..++......++|..++|.+++++.+.+
T Consensus 92 -------------~~~~~l~~~~~l~~~~~~~~~p~~~al~~~-~~--~~~~~~~g~~~~~~slG~~~g~~l~g~l~~~~ 155 (382)
T TIGR00902 92 -------------HNAWLLFIAIGLFALFFSAGMPIGDALANT-WQ--KQFGLDYGKVRLIGSAAFIIGSALFGGLIGMF 155 (382)
T ss_pred -------------hhHHHHHHHHHHHHHHHccchhHHHHHHHH-HH--HHcCCCccHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 135677788888888888777877777554 33 35677888888999999999999999999999
Q ss_pred cchhhHHHHHHHHH
Q 045564 229 SWRLGSGLNIAANL 242 (296)
Q Consensus 229 gw~~~F~i~~~~~~ 242 (296)
|||..|++..+..+
T Consensus 156 g~~~~f~~~~~~~~ 169 (382)
T TIGR00902 156 DEQNILAILTAGLA 169 (382)
T ss_pred ChhHHHHHHHHHHH
Confidence 99999988765533
No 131
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.24 E-value=2.5e-10 Score=109.96 Aligned_cols=163 Identities=15% Similarity=0.020 Sum_probs=106.7
Q ss_pred hHHHhHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhcchHHHHHHHHHHHHHHHHHHHhhccccCCC
Q 045564 66 LGEGWVANLMVYMIQEFHITSINSALISNIVNGFVNLFPVLGAIIADSFLGSFQVIWISSFISLLGTILLDSTATFDSLR 145 (296)
Q Consensus 66 ~~y~~~~~l~~yl~~~lg~s~~~a~~i~~~~~~~~~~~~l~~G~laDr~iGR~~~i~i~~~l~~ig~~~la~~~~~p~~~ 145 (296)
..++...+++.|+++..|++..+++++...+.+...++.+++|+++|| +|+++....+.++..+..+........+.
T Consensus 266 ~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 342 (438)
T TIGR00712 266 LRYGVLDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDK-VFKGNRGATGVFFMTLVTIAVIVYWMNPA-- 342 (438)
T ss_pred HHHHHHHhHHHHHHHccCCChhhHHHHHHHHHHHHHHHHHHHHHHHHH-hccCcccHHHHHHHHHHHHHHHHHHhcCC--
Confidence 667788899999999899999999999999999999999999999999 66543222333222211111110000010
Q ss_pred CCccCCCCcCcCCCCchhhHHHHHHHHHHHHhhchhhhhhhhhhhccCCCccchhhHHHHHHHHHHHHH-HHHHHHHHhh
Q 045564 146 PQRCDIGLSLCKAPSKVQFAVLYSGIALACLGLGGLRFTLATMGANQFEIPQHQGIFFNWFFILTYAST-VISSAAFVYI 224 (296)
Q Consensus 146 ~~~c~~~~~~~~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~~~ad~f~~~~~r~~~f~~~y~~~~iG~-~i~p~v~~~l 224 (296)
.+........++.+.+..+..........|.+|+ +.|+++.++++...++|+ .++|.+.|++
T Consensus 343 ----------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~gg~~~gp~l~G~l 405 (438)
T TIGR00712 343 ----------------GNPLVDMICMIVIGFLIYGPVMLIGLHALELAPK-KAAGTAAGFTGLFGYLGGSVAASAIVGYT 405 (438)
T ss_pred ----------------CchHHHHHHHHHHHHHHccHHHHHHHHHHHhcCh-hheeeehhhhchHHHhhhhhhcchhHHHH
Confidence 0112222333334433222222233456788884 468889998887778775 6899999999
Q ss_pred hccccchhhHHHHHHHHHHHHHHH
Q 045564 225 EDNLSWRLGSGLNIAANLAGVVIF 248 (296)
Q Consensus 225 ~~~~gw~~~F~i~~~~~~~~~~~~ 248 (296)
.+..||...|++..++.+++++..
T Consensus 406 ~~~~g~~~~~~~~~~~~~~~~~~~ 429 (438)
T TIGR00712 406 VDFFGWDGGFMVMIGGSILAVILL 429 (438)
T ss_pred HHhccchHHHHHHHHHHHHHHHHH
Confidence 998899999988777665555443
No 132
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.24 E-value=7.5e-10 Score=104.55 Aligned_cols=158 Identities=13% Similarity=0.051 Sum_probs=108.3
Q ss_pred hHHHhHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhcchHHHHHHHHHHHHHHHHHHHhhccccCCC
Q 045564 66 LGEGWVANLMVYMIQEFHITSINSALISNIVNGFVNLFPVLGAIIADSFLGSFQVIWISSFISLLGTILLDSTATFDSLR 145 (296)
Q Consensus 66 ~~y~~~~~l~~yl~~~lg~s~~~a~~i~~~~~~~~~~~~l~~G~laDr~iGR~~~i~i~~~l~~ig~~~la~~~~~p~~~ 145 (296)
..+....++++|+.+.+|.+..+++.+.+...++..++.++.|+++|| +|||+.+.++.++..++.+++.... +
T Consensus 214 ~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~~r-~~~~~~~~~~~~~~~i~~~~~~~~~--~--- 287 (382)
T PRK10091 214 GVFAWFSYIKPYMMFISGFSETSMTFIMMLVGLGMVLGNLLSGRLSGR-YSPLRIAAVTDFIIVLALLMLFFFG--G--- 287 (382)
T ss_pred HHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHhHHHheeccc-cCchhHHHHHHHHHHHHHHHHHHHH--h---
Confidence 444455677788888899999999999999999999999999999999 7999999988887777665443221 0
Q ss_pred CCccCCCCcCcCCCCchhhHHHHHHHHHHHHhhchhhhhhhhhhhccCCCccchhhHHHHHHHHHHHHHHHHHHHHHhhh
Q 045564 146 PQRCDIGLSLCKAPSKVQFAVLYSGIALACLGLGGLRFTLATMGANQFEIPQHQGIFFNWFFILTYASTVISSAAFVYIE 225 (296)
Q Consensus 146 ~~~c~~~~~~~~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~~~ad~f~~~~~r~~~f~~~y~~~~iG~~i~p~v~~~l~ 225 (296)
+....++..++.++|.++..+.......+..++++.++.. ..+...++|..+||.++|++.
T Consensus 288 -----------------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~g~~~Gp~~~G~l~ 348 (382)
T PRK10091 288 -----------------MKTASLIFAFICCAGLFALSAPLQILLLQNAKGGELLGAA--GGQIAFNLGSAIGAYCGGMML 348 (382)
T ss_pred -----------------hHHHHHHHHHHHHHHHHhhhHHHHHHHHHhCCcchHHHHH--HHHHHHHHHHHHHHHHhHHHH
Confidence 1123333444445554444443333333333323233433 235667899999999999998
Q ss_pred cc-ccchhhHHHHHHHHHHHHHHH
Q 045564 226 DN-LSWRLGSGLNIAANLAGVVIF 248 (296)
Q Consensus 226 ~~-~gw~~~F~i~~~~~~~~~~~~ 248 (296)
+. .+|++.+.+.++..+++...+
T Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~~~ 372 (382)
T PRK10091 349 TLGLAYNYVALPAALLSFAAMSSL 372 (382)
T ss_pred HcccCcchHHHHHHHHHHHHHHHH
Confidence 85 589999998877665555443
No 133
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.22 E-value=9e-10 Score=105.16 Aligned_cols=142 Identities=9% Similarity=0.011 Sum_probs=105.9
Q ss_pred hHHHhHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhcchHHHHHHHHHHHHHHHHHHHhhccccCCC
Q 045564 66 LGEGWVANLMVYMIQEFHITSINSALISNIVNGFVNLFPVLGAIIADSFLGSFQVIWISSFISLLGTILLDSTATFDSLR 145 (296)
Q Consensus 66 ~~y~~~~~l~~yl~~~lg~s~~~a~~i~~~~~~~~~~~~l~~G~laDr~iGR~~~i~i~~~l~~ig~~~la~~~~~p~~~ 145 (296)
.++......+.|.+..++ +....+.+..+..++..++.++.++++|| +|||+++.++.++..++.+.+.+..
T Consensus 237 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~ii~~~~~~~l~~r-~g~~~~~~~~~~~~~~~~~~~~~~~------ 308 (437)
T TIGR00792 237 AFNIKNGVQVYYFTYVLG-DPELFSYMGSIAIVAGLIGVLLFPRLVKK-FGRKILFAGGILLMVLGYLIFFFAG------ 308 (437)
T ss_pred HHHHHcchhheeEeeecC-ChHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCcHHHHHHHHHHHHHHHHHHHHcc------
Confidence 444333344445554555 45566677777888899999999999999 7999999999888877766554321
Q ss_pred CCccCCCCcCcCCCCchhhHHHHHHHHHHHHhhchhhhhhhhhhhccCCC------ccchhhHHHHHHHHHHHHHHHHHH
Q 045564 146 PQRCDIGLSLCKAPSKVQFAVLYSGIALACLGLGGLRFTLATMGANQFEI------PQHQGIFFNWFFILTYASTVISSA 219 (296)
Q Consensus 146 ~~~c~~~~~~~~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~~~ad~f~~------~~~r~~~f~~~y~~~~iG~~i~p~ 219 (296)
.+...+++..++.+++.+...+...++++|..|. +++++..++++++...+|..+++.
T Consensus 309 ----------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~g~~lg~~ 372 (437)
T TIGR00792 309 ----------------SNLPLILVLIILAGFGQNFVTGLVWALVADTVDYGEWKTGVRAEGLVYSVRTFVRKLGQALAGF 372 (437)
T ss_pred ----------------hhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhcCccchHHHHHHHHHHHHHHHHHHHH
Confidence 1234455666778888888888899999988751 235688899999999999999999
Q ss_pred HHHhhhccccch
Q 045564 220 AFVYIEDNLSWR 231 (296)
Q Consensus 220 v~~~l~~~~gw~ 231 (296)
+.|++.+..||.
T Consensus 373 i~g~ll~~~G~~ 384 (437)
T TIGR00792 373 LVGLILGIIGYV 384 (437)
T ss_pred HHHHHHHHcCCC
Confidence 999998776663
No 134
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.22 E-value=2.8e-10 Score=105.18 Aligned_cols=147 Identities=9% Similarity=0.084 Sum_probs=103.6
Q ss_pred hHHHhHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhcchHHHHHHHHH--HHHHHHHHHHhhccccC
Q 045564 66 LGEGWVANLMVYMIQEFHITSINSALISNIVNGFVNLFPVLGAIIADSFLGSFQVIWISSF--ISLLGTILLDSTATFDS 143 (296)
Q Consensus 66 ~~y~~~~~l~~yl~~~lg~s~~~a~~i~~~~~~~~~~~~l~~G~laDr~iGR~~~i~i~~~--l~~ig~~~la~~~~~p~ 143 (296)
..++...+++.|+.+.+|.+..+++...+...++..++.+++|+++||..+||+....... ...++...... .+.
T Consensus 231 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~ 307 (379)
T TIGR00881 231 VRTGILDWSPLYLTQEKGFSKEKASWAFTLYELGGLVGTLLAGWLSDKLFNGRRGPLAVFFMALIIVSLLVYWL---NPA 307 (379)
T ss_pred HHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHcchhHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHHhc---Ccc
Confidence 5566677889999999999999999999999999999999999999984344443222111 11111111110 000
Q ss_pred CCCCccCCCCcCcCCCCchhhHHHHHHHHHHHHhhchhhhhhhhhhhccCCCccchhhHHHHHHHHHHHHHHHHHHHHHh
Q 045564 144 LRPQRCDIGLSLCKAPSKVQFAVLYSGIALACLGLGGLRFTLATMGANQFEIPQHQGIFFNWFFILTYASTVISSAAFVY 223 (296)
Q Consensus 144 ~~~~~c~~~~~~~~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~~~ad~f~~~~~r~~~f~~~y~~~~iG~~i~p~v~~~ 223 (296)
.+....++..++.++...+..+....+..|.+|+ +.|++..++++...++|..++|.+.|+
T Consensus 308 ------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~g~~~~~~~~g~ 368 (379)
T TIGR00881 308 ------------------ANPLMDLICLFALGFLVYGPQMLIGVIASELAPK-KAAGTAAGFVGFFAYLGGILAGLPLGY 368 (379)
T ss_pred ------------------hhHHHHHHHHHHHHHHHhhhhHHHHHHHHHhcCc-chhHHHHHHHHHhhhhhhhhhhhhHHH
Confidence 1223334444555555555556667788899984 478999999999999999999999999
Q ss_pred hhccccchhhH
Q 045564 224 IEDNLSWRLGS 234 (296)
Q Consensus 224 l~~~~gw~~~F 234 (296)
+.+.+||++.|
T Consensus 369 l~~~~g~~~~f 379 (379)
T TIGR00881 369 LADGFGWAGAF 379 (379)
T ss_pred HHHhhcccccC
Confidence 99999998765
No 135
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.21 E-value=9.4e-10 Score=101.31 Aligned_cols=140 Identities=13% Similarity=0.048 Sum_probs=113.0
Q ss_pred hHHHhH-HHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhcchHHHHHHHHHHHHHHHHHHHhhccccCC
Q 045564 66 LGEGWV-ANLMVYMIQEFHITSINSALISNIVNGFVNLFPVLGAIIADSFLGSFQVIWISSFISLLGTILLDSTATFDSL 144 (296)
Q Consensus 66 ~~y~~~-~~l~~yl~~~lg~s~~~a~~i~~~~~~~~~~~~l~~G~laDr~iGR~~~i~i~~~l~~ig~~~la~~~~~p~~ 144 (296)
.+++.. ...+.|.++.+|.+..+.+.+.....++..++.++.|+++|| +|||+.+..+.++..++...+....
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~----- 298 (365)
T TIGR00900 225 VFAPAIVALFPYVQSKYLGRGSTHYGWVLAAFGLGALLGALLLGLLGRY-FKRMALMTGAIFVIGLAILVVGLTP----- 298 (365)
T ss_pred HHHHHHHHHhHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHHHHHHHHH-hchhHHHHHHHHHHHHHHHHHHhhc-----
Confidence 444444 566777777799999999999999999999999999999999 7999998887666665554433221
Q ss_pred CCCccCCCCcCcCCCCchhhHHHHHHHHHHHHhhchhhhhhhhhhhccCCCccchhhHHHHHHHHHHHHHHHHHHHHHhh
Q 045564 145 RPQRCDIGLSLCKAPSKVQFAVLYSGIALACLGLGGLRFTLATMGANQFEIPQHQGIFFNWFFILTYASTVISSAAFVYI 224 (296)
Q Consensus 145 ~~~~c~~~~~~~~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~~~ad~f~~~~~r~~~f~~~y~~~~iG~~i~p~v~~~l 224 (296)
.+...+++..++.+++.+...+...+++.|.+| ++.|++.+++++...++|..++|.+.|++
T Consensus 299 -----------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~g~~~~g~l 360 (365)
T TIGR00900 299 -----------------PNFPLFLVLWFAIGVGYGPINVPQGTLLQRRVP-AELLGRVFGAQFSLSHAAWPLGLILAGPL 360 (365)
T ss_pred -----------------hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 013556677888899999989999999999998 44789999999999999999999999999
Q ss_pred hcccc
Q 045564 225 EDNLS 229 (296)
Q Consensus 225 ~~~~g 229 (296)
.|.+|
T Consensus 361 ~~~~g 365 (365)
T TIGR00900 361 ADHLG 365 (365)
T ss_pred HHHcC
Confidence 88654
No 136
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=99.21 E-value=2.1e-09 Score=101.63 Aligned_cols=162 Identities=14% Similarity=-0.026 Sum_probs=112.5
Q ss_pred hHHHhHHHHHHHHHHHhCCChhHHHHHHHHHHH-HHHHHHHHHHHHhhhhcchHHHHHHHHHHHHHHHHHHHhhccccCC
Q 045564 66 LGEGWVANLMVYMIQEFHITSINSALISNIVNG-FVNLFPVLGAIIADSFLGSFQVIWISSFISLLGTILLDSTATFDSL 144 (296)
Q Consensus 66 ~~y~~~~~l~~yl~~~lg~s~~~a~~i~~~~~~-~~~~~~l~~G~laDr~iGR~~~i~i~~~l~~ig~~~la~~~~~p~~ 144 (296)
+.....++.+.|+.+ .|++..+.+.+...... ...++.+++|++.|| +|+|+.+.++.++..+..+...... ....
T Consensus 223 ~~~~~~~~~~~~l~~-~G~s~~~ig~~~~~~~~~~~~~g~~~~g~l~~r-~g~~~~l~~~~~~~~~~~~~~~~~~-~~~~ 299 (390)
T TIGR02718 223 TAVSGFGLSKLYLVD-AGWPLEWIGRLGMAGGAVTVLLGCGGGAWLVRR-AGLWRTFILGVGLAGSLALLWFAQA-AFWL 299 (390)
T ss_pred HHHHHHHHhhHHHHh-cCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHH-hhHHHHHHHHHHHHHHHHHHHHHHH-Hccc
Confidence 344444566778865 79999999988877754 566778999999999 7999999887766533222221111 0000
Q ss_pred CCCccCCCCcCcCCCCchhhHHHHHHHHHHHHhhchhhhhhhhhhhccCCCccchhhHHHHHHHHHHHHHHHHHHHHHhh
Q 045564 145 RPQRCDIGLSLCKAPSKVQFAVLYSGIALACLGLGGLRFTLATMGANQFEIPQHQGIFFNWFFILTYASTVISSAAFVYI 224 (296)
Q Consensus 145 ~~~~c~~~~~~~~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~~~ad~f~~~~~r~~~f~~~y~~~~iG~~i~p~v~~~l 224 (296)
. ......+....+.+++.|...+...+...+..++++.+++.+++++...++|..++|.++|++
T Consensus 300 ~----------------~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lg~~~g~~~~G~l 363 (390)
T TIGR02718 300 A----------------PGIAVAWSCSAFGSLITGITSVAIYTAFMRFAGDGDQAGTDVTAVQSTRDLGELIASSIAGYL 363 (390)
T ss_pred C----------------CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcccchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0 011223333344455666666777777777666435789999999999999999999999999
Q ss_pred hccccchhhHHHHHHHHHHHHH
Q 045564 225 EDNLSWRLGSGLNIAANLAGVV 246 (296)
Q Consensus 225 ~~~~gw~~~F~i~~~~~~~~~~ 246 (296)
.+..|++..|++.+++.+++.+
T Consensus 364 ~~~~G~~~~f~~~~~~~l~a~~ 385 (390)
T TIGR02718 364 TDRFGYAGGFLSGTVLAVLAIL 385 (390)
T ss_pred HHHHccHHHHHHHHHHHHHHHH
Confidence 9988999999988776665543
No 137
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=99.20 E-value=5.3e-10 Score=107.05 Aligned_cols=150 Identities=13% Similarity=0.006 Sum_probs=103.2
Q ss_pred hHHHhHHHHHHHHHHH-hCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhcchHHH-HHHHHHHHHHHHHHHHhhccccC
Q 045564 66 LGEGWVANLMVYMIQE-FHITSINSALISNIVNGFVNLFPVLGAIIADSFLGSFQV-IWISSFISLLGTILLDSTATFDS 143 (296)
Q Consensus 66 ~~y~~~~~l~~yl~~~-lg~s~~~a~~i~~~~~~~~~~~~l~~G~laDr~iGR~~~-i~i~~~l~~ig~~~la~~~~~p~ 143 (296)
.++++.+++|.|+++. .|.+..+++.......++..++.+++|+++|| +|||+. +.+..++..++.+ +.... +
T Consensus 257 ~~~~~~~~~p~~l~~~~~~~s~~~~~~~~~~~~l~~~~g~l~~g~l~dr-~~~r~~~~~~~~~~~~~~~~-~~~~~--~- 331 (412)
T TIGR02332 257 TLSAINIWTPQILQSFNQGSSNIMIGLLAAIPQFCTIFGMIWWSRHSDR-LKERKHHTALPYLFAAAGWL-LASAT--D- 331 (412)
T ss_pred HHHHHHHHHHHHHHhcCCCCcHHHhHHHhhHHHHHHHHHHHHHHHHhcc-cCccHHHHHHHHHHHHHHHH-HHHhc--C-
Confidence 7788889999999763 47788888888999999999999999999999 797764 3333333333321 11111 0
Q ss_pred CCCCccCCCCcCcCCCCchhhHHHHHHHHHHHHhhchhhhhhhhhhhccCCCccchhhHHHHHHHHHHHHHHHHHHHHHh
Q 045564 144 LRPQRCDIGLSLCKAPSKVQFAVLYSGIALACLGLGGLRFTLATMGANQFEIPQHQGIFFNWFFILTYASTVISSAAFVY 223 (296)
Q Consensus 144 ~~~~~c~~~~~~~~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~~~ad~f~~~~~r~~~f~~~y~~~~iG~~i~p~v~~~ 223 (296)
.. ...+++..+.++|.....+.......|.+| ++.|+.++++.+...++|+.++|.+.+.
T Consensus 332 ------------------~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~-~~~~~~a~g~~~~~~~~g~~~~p~~~g~ 391 (412)
T TIGR02332 332 ------------------HN-LIQLLGIIMASMGSFSAMAIFWTTPDQSIS-LQARAIAIAVINATGNIGSALSPFLIGI 391 (412)
T ss_pred ------------------CH-HHHHHHHHHHHHHhhhhhhHHHhhcccccc-hHHHHHHHHHHHHhhhhhhhhhhhhccc
Confidence 01 112222223333333333334444567777 4478999999999999999999999999
Q ss_pred hhcccc-chhhHHHHHHH
Q 045564 224 IEDNLS-WRLGSGLNIAA 240 (296)
Q Consensus 224 l~~~~g-w~~~F~i~~~~ 240 (296)
+.+..| |+++|++.++.
T Consensus 392 i~~~~g~~~~~~~~~~~~ 409 (412)
T TIGR02332 392 LKDATGSFNSGLWFVAAL 409 (412)
T ss_pred ccccCCCCchhHHHHHHH
Confidence 998774 99998876653
No 138
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.20 E-value=1.8e-09 Score=102.92 Aligned_cols=147 Identities=12% Similarity=0.013 Sum_probs=104.4
Q ss_pred hHHHhHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhcchHHHHHHHHHHHHHHHHHHHhhccccCCC
Q 045564 66 LGEGWVANLMVYMIQEFHITSINSALISNIVNGFVNLFPVLGAIIADSFLGSFQVIWISSFISLLGTILLDSTATFDSLR 145 (296)
Q Consensus 66 ~~y~~~~~l~~yl~~~lg~s~~~a~~i~~~~~~~~~~~~l~~G~laDr~iGR~~~i~i~~~l~~ig~~~la~~~~~p~~~ 145 (296)
..+.+..+++.|+.+ .|.+..+.+.+.+...++..++.+++|+++|| +|||+.+..+.++..++.+.+... +.
T Consensus 246 ~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr-~~~~~~~~~~~~~~~~~~~~~~~~---~~-- 318 (426)
T PRK12307 246 ANWPIFGLLPTYLAG-EGFDTGVVSNLMTAAAFGTVLGNIVWGLCADR-IGLKKTFSIGLLMSFLFIFPLFRI---PQ-- 318 (426)
T ss_pred HHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hccHHHHHHHHHHHHHHHHHHHHH---cc--
Confidence 444466778888875 69999888888888899999999999999999 799999988887665544333221 10
Q ss_pred CCccCCCCcCcCCCCchhhHHHHHHHHHHHHhhchhhhhhhhhhhccCCCccchhhHHHHHHHHHHHHHHHHHHHHHhhh
Q 045564 146 PQRCDIGLSLCKAPSKVQFAVLYSGIALACLGLGGLRFTLATMGANQFEIPQHQGIFFNWFFILTYASTVISSAAFVYIE 225 (296)
Q Consensus 146 ~~~c~~~~~~~~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~~~ad~f~~~~~r~~~f~~~y~~~~iG~~i~p~v~~~l~ 225 (296)
.....+....+..+.+..+..+..+.++.|.+|+ +.|+++.++.+...++|+.++|.+.+++.
T Consensus 319 ----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~-~~~g~~~g~~~~~~~~~~~~gp~~~g~l~ 381 (426)
T PRK12307 319 ----------------DNYLLLGACLFGLMATNVGVGGLVPKFLYDYFPL-EVRGLGTGLIYNLAATSGTFNSMAATWLG 381 (426)
T ss_pred ----------------ccHHHHHHHHHHHHHhcccHhHHHHHHHHHhCcH-HHHhhhhhHHHHHHhHHHHHHHHHHHHHH
Confidence 0111111111222222233445677888999994 47899999988888999999999999999
Q ss_pred ccccchhhHHH
Q 045564 226 DNLSWRLGSGL 236 (296)
Q Consensus 226 ~~~gw~~~F~i 236 (296)
+.+|+....++
T Consensus 382 ~~~g~~~~~~~ 392 (426)
T PRK12307 382 ITMGLGAALTF 392 (426)
T ss_pred HcccHHHHHHH
Confidence 98886554333
No 139
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=99.19 E-value=2.2e-09 Score=101.80 Aligned_cols=177 Identities=14% Similarity=-0.002 Sum_probs=132.9
Q ss_pred CCchhHHHHHHHHH-H-hHHHhHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhcchHHHHHHHHHHH
Q 045564 51 GGRTALLSRTVTCL-T-LGEGWVANLMVYMIQEFHITSINSALISNIVNGFVNLFPVLGAIIADSFLGSFQVIWISSFIS 128 (296)
Q Consensus 51 ~~~~~~~~l~~~~~-~-~~y~~~~~l~~yl~~~lg~s~~~a~~i~~~~~~~~~~~~l~~G~laDr~iGR~~~i~i~~~l~ 128 (296)
++|+.........+ . +.|...+|+.+++++..|+|....+++...+.++..++.+++|+++|| +.|+++.....+.
T Consensus 209 ~~p~v~~~l~~t~l~~~g~F~~ftYi~P~L~~v~g~s~~~vs~~Ll~~Gv~~~~Gn~~gGrl~dr--~~~~~l~~~~~l~ 286 (394)
T COG2814 209 RRPGVLLGLLATFLFMTGHFALYTYIRPFLESVAGFSVSAVSLVLLAFGIAGFIGNLLGGRLADR--GPRRALIAALLLL 286 (394)
T ss_pred cCchHHHHHHHHHHHHcchhhhHHhHHHHHHHccCCCHhHHHHHHHHHHHHHHHHHHHHhhhccc--cchhHHHHHHHHH
Confidence 44544433333333 5 888888999999999999999999999999999999999999999999 8888888887777
Q ss_pred HHHHHHHHhhccccCCCCCccCCCCcCcCCCCchhhHHHHHHHHHHHHhhchhhhhhhhhhhccCCCccchhhHHHHHHH
Q 045564 129 LLGTILLDSTATFDSLRPQRCDIGLSLCKAPSKVQFAVLYSGIALACLGLGGLRFTLATMGANQFEIPQHQGIFFNWFFI 208 (296)
Q Consensus 129 ~ig~~~la~~~~~p~~~~~~c~~~~~~~~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~~~ad~f~~~~~r~~~f~~~y~ 208 (296)
.+..+.+.+.. .+....++..++.++..+........-.++..|+ .++...+++.-
T Consensus 287 a~~~l~l~~~~----------------------~~~~~~~~~~~~wg~a~~~~~~~~~~~~a~~~p~--~~~~a~sl~~a 342 (394)
T COG2814 287 ALALLALTFTG----------------------ASPALALALLFLWGFAFSPALQGLQTRLARLAPD--AADLAGSLNVA 342 (394)
T ss_pred HHHHHHHHHhc----------------------chHHHHHHHHHHHHHHhhhhhhHHHHHhcccCCC--chHHHHHHHHH
Confidence 76655554432 1233444455555555554444445555554442 46778888888
Q ss_pred HHHHHHHHHHHHHHhhhccccchhhHHHHHHHHHHHHHHHHhCCC
Q 045564 209 LTYASTVISSAAFVYIEDNLSWRLGSGLNIAANLAGVVIFLSGKH 253 (296)
Q Consensus 209 ~~~iG~~i~p~v~~~l~~~~gw~~~F~i~~~~~~~~~~~~~~~~~ 253 (296)
+.|+|..+|..++|.+.+++|+....++.++..++++++.+...+
T Consensus 343 a~nlgia~GA~lGG~v~~~~g~~~~~~~~a~l~~~a~~~~~~~~~ 387 (394)
T COG2814 343 AFNLGIALGAALGGLVLDALGYAATGWVGAALLLLALLLALLSAR 387 (394)
T ss_pred HHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999999999999988888876654433
No 140
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=99.19 E-value=4.3e-10 Score=106.23 Aligned_cols=176 Identities=16% Similarity=0.085 Sum_probs=133.7
Q ss_pred hhHHHHHHHHH--H-hHHHhHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhcchHHHHHHHHHHHHH
Q 045564 54 TALLSRTVTCL--T-LGEGWVANLMVYMIQEFHITSINSALISNIVNGFVNLFPVLGAIIADSFLGSFQVIWISSFISLL 130 (296)
Q Consensus 54 ~~~~~l~~~~~--~-~~y~~~~~l~~yl~~~lg~s~~~a~~i~~~~~~~~~~~~l~~G~laDr~iGR~~~i~i~~~l~~i 130 (296)
|..+.+.+.++ . ++-+...+++.|++++++.++.+++.....+.....+.-++||+|||| +|.+|++.+.....++
T Consensus 218 ~~~W~lsllY~~tFG~Fvgfs~~l~~~~~~~fg~~~~~Ag~~a~~f~~~g~l~Rp~GG~LsDR-~Gg~rv~~~~f~~~~~ 296 (417)
T COG2223 218 KDTWLLSLLYFATFGGFVGFSAYLPMYLVTQFGLSPVTAGLIAFLFPLIGALARPLGGWLSDR-IGGRRVTLAVFVGMAL 296 (417)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHHHHhccchhhhh-ccchhHHHHHHHHHHH
Confidence 34566666777 4 788889999999999999999999999999999999999999999999 7999998888888877
Q ss_pred HHHHHHhhccccCCCCCccCCCCcCcCCCCchhhHHHHHHHHHHHHhhchhhhhhhhhhhccCCCccchhhHHHHHHHHH
Q 045564 131 GTILLDSTATFDSLRPQRCDIGLSLCKAPSKVQFAVLYSGIALACLGLGGLRFTLATMGANQFEIPQHQGIFFNWFFILT 210 (296)
Q Consensus 131 g~~~la~~~~~p~~~~~~c~~~~~~~~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~~~ad~f~~~~~r~~~f~~~y~~~ 210 (296)
+..++.+.. +.. . ...+...+++..+.+.+..|.-+..+..++...||+ .-+..-++.....
T Consensus 297 ~~~~l~~~~--~~~-------------~-~~~~~~~~~~~~l~l~~~~G~GnGsvfk~Ip~if~~--~~G~v~G~vga~G 358 (417)
T COG2223 297 AAALLSLFL--TGF-------------G-HGGSFVVFVAVFLALFVFAGLGNGSVFKMIPVIFPK--ETGAVTGIVGAIG 358 (417)
T ss_pred HHHHHHccc--ccc-------------c-cCcchHHHHHHHHHHHHHhccCcchheeechHHHHh--hhhHHHHHHHHhc
Confidence 777666542 111 0 011233444444455555665566677777777763 4567777778888
Q ss_pred HHHHHHHHHHHHhhhcccc-chhhHHHHHHHHHHHHHHH
Q 045564 211 YASTVISSAAFVYIEDNLS-WRLGSGLNIAANLAGVVIF 248 (296)
Q Consensus 211 ~iG~~i~p~v~~~l~~~~g-w~~~F~i~~~~~~~~~~~~ 248 (296)
++|+..-|...+...+.+| +...|++.....++++++.
T Consensus 359 ~lGGf~lp~~~g~~~~~tg~~~~~f~~~~~~~~~a~v~~ 397 (417)
T COG2223 359 GLGGFFLPLAFGVSLDLTGSYTGAFMLLLAFYLVALVLT 397 (417)
T ss_pred cccccchhHHHHHHHHhcccHHHHHHHHHHHHHHHHHHH
Confidence 8998888999999988887 8888998888777666654
No 141
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.17 E-value=1.9e-09 Score=102.05 Aligned_cols=157 Identities=10% Similarity=0.028 Sum_probs=115.3
Q ss_pred hHHHhHHHHHHHHHHHh---CCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhcchHHHHHHHHHHHHHHHHHHHhhcccc
Q 045564 66 LGEGWVANLMVYMIQEF---HITSINSALISNIVNGFVNLFPVLGAIIADSFLGSFQVIWISSFISLLGTILLDSTATFD 142 (296)
Q Consensus 66 ~~y~~~~~l~~yl~~~l---g~s~~~a~~i~~~~~~~~~~~~l~~G~laDr~iGR~~~i~i~~~l~~ig~~~la~~~~~p 142 (296)
.+.......+.|+++.+ +.+....+.+.++..+...++.+..|++.|| +|||+.+.++.++..++..+.....
T Consensus 230 ~~~~~~~~~~~y~~~~~~~~~~~~~~~g~~~~~~~i~~~~~~~~~g~l~~r-~g~~~~l~~~~~l~~l~~~~~~~~~--- 305 (396)
T TIGR00882 230 VYDVFDQQFANFFTSFFATPQQGTRVFGYVTTMGELLNALIMFCAPLIINR-IGAKNALLIAGTIMSVRIIGSSFAT--- 305 (396)
T ss_pred HHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHH-hccchhHHHHHHHHHHHHHHHHhcC---
Confidence 33334456778887766 4455666777787888888888999999999 7999999998888877665543321
Q ss_pred CCCCCccCCCCcCcCCCCchhhHHHHHHHHHHHHhhchhhhhhhhhhhccCCCccchhhHHHH-HHHHHHHHHHHHHHHH
Q 045564 143 SLRPQRCDIGLSLCKAPSKVQFAVLYSGIALACLGLGGLRFTLATMGANQFEIPQHQGIFFNW-FFILTYASTVISSAAF 221 (296)
Q Consensus 143 ~~~~~~c~~~~~~~~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~~~ad~f~~~~~r~~~f~~-~y~~~~iG~~i~p~v~ 221 (296)
+...+++.+++.+++.+........+..+.++++ .+++.++. ++.+..+|..++|.+.
T Consensus 306 --------------------~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~-~~at~~~~~~~~~~~lg~~~~~~l~ 364 (396)
T TIGR00882 306 --------------------TALEVVILKMLHAFEVPFLLVGCFKYITSQFDVR-LSATIYLIGFQFAKQLAMIFLSTLA 364 (396)
T ss_pred --------------------ChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcc-eEEEeehHHHHHHHHHHHHHHHHhH
Confidence 2234556677777776666555666677777744 55666655 5678899999999999
Q ss_pred HhhhccccchhhHHHHHHHHHHHHHH
Q 045564 222 VYIEDNLSWRLGSGLNIAANLAGVVI 247 (296)
Q Consensus 222 ~~l~~~~gw~~~F~i~~~~~~~~~~~ 247 (296)
|++.+..||+..|.+.+++.+++.++
T Consensus 365 G~l~~~~G~~~~f~~~~~~~~i~~~~ 390 (396)
T TIGR00882 365 GNMYDSIGFQGAYLVLGCIVLLFTLI 390 (396)
T ss_pred HHHHHhcccHHHHHHHHHHHHHHHHH
Confidence 99999899999999988876665544
No 142
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=99.17 E-value=2.3e-09 Score=99.93 Aligned_cols=138 Identities=11% Similarity=0.019 Sum_probs=106.6
Q ss_pred hHHHhHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhc-chHHHHHHHHHHHHHHHHHHHhhccccCC
Q 045564 66 LGEGWVANLMVYMIQEFHITSINSALISNIVNGFVNLFPVLGAIIADSFL-GSFQVIWISSFISLLGTILLDSTATFDSL 144 (296)
Q Consensus 66 ~~y~~~~~l~~yl~~~lg~s~~~a~~i~~~~~~~~~~~~l~~G~laDr~i-GR~~~i~i~~~l~~ig~~~la~~~~~p~~ 144 (296)
.+++...+++.|+++ .|.+..+++.+.+...++..++.++.|+++|| + +||+.+.++.++..++.+.+.+.. .
T Consensus 212 ~~~~~~~~lp~~~~~-~g~~~~~~g~~~~~~~~~~i~~~~~~g~l~dr-~~~~~~~~~~~~~~~~~~~~~~~~~~---~- 285 (355)
T TIGR00896 212 LYYSLIGWLPAILIS-HGASAATAGSLLALMQLAQAASALLIPALARR-VKDQRGIVAVLAVLQLVGLCGLLFAP---M- 285 (355)
T ss_pred HHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHhHHHHHhh-hccchHHHHHHHHHHHHHHHHHHHhh---h-
Confidence 677777889999864 79999999999999999999999999999999 7 567777777777777766554321 0
Q ss_pred CCCccCCCCcCcCCCCchhhHHHHHHHHHHHHhhchhhhhhhhhhhccCCCccchhhHHHHHHHHHHHHHHHHHHHHHhh
Q 045564 145 RPQRCDIGLSLCKAPSKVQFAVLYSGIALACLGLGGLRFTLATMGANQFEIPQHQGIFFNWFFILTYASTVISSAAFVYI 224 (296)
Q Consensus 145 ~~~~c~~~~~~~~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~~~ad~f~~~~~r~~~f~~~y~~~~iG~~i~p~v~~~l 224 (296)
.. .. ...++.|++.|...+...+...+..+++++++..+++.+...++|..++|.+.|++
T Consensus 286 -----------------~~--~~-~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~gp~~~G~l 345 (355)
T TIGR00896 286 -----------------HG--LW-AWALVLGLGQGGAFPLALTLIGLRSRQAAQAAALSAMAQSIGYLLAALGPLFVGVL 345 (355)
T ss_pred -----------------hH--HH-HHHHHHHHhhhhHhHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 11 11 13457788888888887777776666444667788877777788889999999999
Q ss_pred hcccc
Q 045564 225 EDNLS 229 (296)
Q Consensus 225 ~~~~g 229 (296)
.|.+|
T Consensus 346 ~~~~g 350 (355)
T TIGR00896 346 HDISG 350 (355)
T ss_pred HHHhc
Confidence 98775
No 143
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=99.16 E-value=5.6e-09 Score=97.42 Aligned_cols=151 Identities=12% Similarity=0.076 Sum_probs=108.3
Q ss_pred hHHHhHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhcchHHHHHHHHHHHHHHHHHHHhhccccCCC
Q 045564 66 LGEGWVANLMVYMIQEFHITSINSALISNIVNGFVNLFPVLGAIIADSFLGSFQVIWISSFISLLGTILLDSTATFDSLR 145 (296)
Q Consensus 66 ~~y~~~~~l~~yl~~~lg~s~~~a~~i~~~~~~~~~~~~l~~G~laDr~iGR~~~i~i~~~l~~ig~~~la~~~~~p~~~ 145 (296)
.+++...+.+.|+.+++|.++.+++.+.....++..++.+++|+++|| +|||+.+.++.++..++.+++..... +.
T Consensus 221 ~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-- 296 (385)
T TIGR00710 221 GFFAFFSGAPFVYIDIMGVSPSVFGLLFALNIIAMIFGGFLNGRFIKK-WGAKSLLRMGLILFAVSAVLLEITAI-LG-- 296 (385)
T ss_pred HHHHHHHcChHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cCHHHHHHHHHHHHHHHHHHHHHHHH-hc--
Confidence 556666677888888999999999999999999999999999999999 79999999888777776665554321 10
Q ss_pred CCccCCCCcCcCCCCchhhHHHHHHHHHHHHhhchhhhhhhhhhhccCCCccchhhHHHHHHHHHHHHHHHHHHHHHhhh
Q 045564 146 PQRCDIGLSLCKAPSKVQFAVLYSGIALACLGLGGLRFTLATMGANQFEIPQHQGIFFNWFFILTYASTVISSAAFVYIE 225 (296)
Q Consensus 146 ~~~c~~~~~~~~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~~~ad~f~~~~~r~~~f~~~y~~~~iG~~i~p~v~~~l~ 225 (296)
......+++..++.+++.+...+.......|.+| + ++++..++++.....++.+.+.+.+.+.
T Consensus 297 ---------------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~-~~g~~~~~~~~~~~~~g~i~~~~~~~~~ 359 (385)
T TIGR00710 297 ---------------LGSWAMIIGPMMFVGIGNSMISSIAMAYALEDFP-H-VAGTASALFGTLRLVLGAIVGYLVSLIH 359 (385)
T ss_pred ---------------cchHHHHHHHHHHHHHHHHHHHHHHHHHHhccCc-c-cchHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 0122344455667788888888888888888887 3 5778888877666654444444455666
Q ss_pred ccccchhhHHHH
Q 045564 226 DNLSWRLGSGLN 237 (296)
Q Consensus 226 ~~~gw~~~F~i~ 237 (296)
++.+|...+...
T Consensus 360 ~~~~~~~~~~~~ 371 (385)
T TIGR00710 360 GNTAWPMSLSCL 371 (385)
T ss_pred ccChHHHHHHHH
Confidence 555555444443
No 144
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.16 E-value=5.4e-09 Score=99.26 Aligned_cols=155 Identities=15% Similarity=0.060 Sum_probs=114.3
Q ss_pred hHHHhHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhcchHHHHHHHHHHHHHHHHHHHhhccccCCC
Q 045564 66 LGEGWVANLMVYMIQEFHITSINSALISNIVNGFVNLFPVLGAIIADSFLGSFQVIWISSFISLLGTILLDSTATFDSLR 145 (296)
Q Consensus 66 ~~y~~~~~l~~yl~~~lg~s~~~a~~i~~~~~~~~~~~~l~~G~laDr~iGR~~~i~i~~~l~~ig~~~la~~~~~p~~~ 145 (296)
..+......+.|+.+++|.+..+.+.......++..++.++.|+++|| +|||+.+.++.++..+|.+++.+....+
T Consensus 230 ~~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~~r-~~~~~~~~~~~~~~~~g~~~~~~~~~~~--- 305 (406)
T PRK15402 230 PLLAWIALSPVILISGEQLSSYEYGLLQVPVFGALIAGNLTLARLTSR-RPLRSLIRMGLWPMVAGLLLAALATVIS--- 305 (406)
T ss_pred HHHHHHHHhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cCHHHHHHHHHHHHHHHHHHHHHHHHcc---
Confidence 444555667888888899999988887777777888999999999999 7999999998888877777665542100
Q ss_pred CCccCCCCcCcCCCCchhhHHHHHHHHHHHHhhchhhhhhhhhhhccCCCccchhhHHHHHHHHHHHHHHHHHHHHHhhh
Q 045564 146 PQRCDIGLSLCKAPSKVQFAVLYSGIALACLGLGGLRFTLATMGANQFEIPQHQGIFFNWFFILTYASTVISSAAFVYIE 225 (296)
Q Consensus 146 ~~~c~~~~~~~~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~~~ad~f~~~~~r~~~f~~~y~~~~iG~~i~p~v~~~l~ 225 (296)
..+...++++.++.++|.+...+..........+ +.|++..+.+++...+|..+|+.+.+++.
T Consensus 306 ---------------~~~~~~~~~~~~~~g~g~~~~~~~~~~~~~~~~~--~~~g~~~~~~~~~~~~~~~~g~~~~~~l~ 368 (406)
T PRK15402 306 ---------------SHAYLWLTAGLSLYAFGIGLANAGLYRLTLFSSD--VSKGTVSAAMGMLSMLIFTVGIELSKHAY 368 (406)
T ss_pred ---------------cccHHHHHHHHHHHHHHHHHHhhhHHHHHhhhcc--ccccHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 0123445667778888888777666555443333 46889999999999999999999999998
Q ss_pred ccccchhhHHHHHHHH
Q 045564 226 DNLSWRLGSGLNIAAN 241 (296)
Q Consensus 226 ~~~gw~~~F~i~~~~~ 241 (296)
+..++....++..+..
T Consensus 369 ~~~~~~~~~~~~~~~~ 384 (406)
T PRK15402 369 LGGGNGLFNLFNLANG 384 (406)
T ss_pred cCCchHHHHHHHHHHH
Confidence 8777665444444433
No 145
>PRK10504 putative transporter; Provisional
Probab=99.16 E-value=4.2e-09 Score=101.90 Aligned_cols=143 Identities=8% Similarity=-0.092 Sum_probs=108.7
Q ss_pred hHHHhHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhcchHHHHHHHHHHHHHHHHHHHhhccccCCC
Q 045564 66 LGEGWVANLMVYMIQEFHITSINSALISNIVNGFVNLFPVLGAIIADSFLGSFQVIWISSFISLLGTILLDSTATFDSLR 145 (296)
Q Consensus 66 ~~y~~~~~l~~yl~~~lg~s~~~a~~i~~~~~~~~~~~~l~~G~laDr~iGR~~~i~i~~~l~~ig~~~la~~~~~p~~~ 145 (296)
++.......+.|++..+|.+..+++.......++..++.++.|+++|| +|||+++.++.++..++.+++.+.. +.
T Consensus 276 ~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~r-~g~~~~~~~~~~~~~~~~~~~~~~~--~~-- 350 (471)
T PRK10504 276 GSGMLPFMTPVFLQIGLGFSPFHAGLMMIPMVLGSMGMKRIVVQVVNR-FGYRRVLVATTLGLALVSLLFMLVA--LL-- 350 (471)
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCchHHHHHHHHHHHHHHHHHHhcc--cc--
Confidence 433344556778877899999999988888888888888999999999 7999999988887777655544321 00
Q ss_pred CCccCCCCcCcCCCCchhhHHHHHHHHHHHHhhchhhhhhhhhhhccCCCccchhhHHHHHHHHHHHHHHHHHHHHHhhh
Q 045564 146 PQRCDIGLSLCKAPSKVQFAVLYSGIALACLGLGGLRFTLATMGANQFEIPQHQGIFFNWFFILTYASTVISSAAFVYIE 225 (296)
Q Consensus 146 ~~~c~~~~~~~~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~~~ad~f~~~~~r~~~f~~~y~~~~iG~~i~p~v~~~l~ 225 (296)
.....+.+..++.|++.+...+...++..+.+|++ .++..++++++...+|..+|+.+++.+.
T Consensus 351 ----------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~g~~ig~~i~g~ll 413 (471)
T PRK10504 351 ----------------GWYYLLPFVLFLQGMVNSTRFSSMNTLTLKDLPDN-LASSGNSLLSMIMQLSMSIGVTIAGLLL 413 (471)
T ss_pred ----------------ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHH-hccchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 11223334456677888877888888888988844 7899999999999999999999998887
Q ss_pred ccccc
Q 045564 226 DNLSW 230 (296)
Q Consensus 226 ~~~gw 230 (296)
+..|+
T Consensus 414 ~~~g~ 418 (471)
T PRK10504 414 GLFGQ 418 (471)
T ss_pred HHhhh
Confidence 65554
No 146
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.15 E-value=6.2e-09 Score=98.29 Aligned_cols=153 Identities=9% Similarity=-0.030 Sum_probs=115.0
Q ss_pred hHHHhHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhcchHHHHHHHHHHHHHHHHHHHhhccccCCC
Q 045564 66 LGEGWVANLMVYMIQEFHITSINSALISNIVNGFVNLFPVLGAIIADSFLGSFQVIWISSFISLLGTILLDSTATFDSLR 145 (296)
Q Consensus 66 ~~y~~~~~l~~yl~~~lg~s~~~a~~i~~~~~~~~~~~~l~~G~laDr~iGR~~~i~i~~~l~~ig~~~la~~~~~p~~~ 145 (296)
.+.+...+++.|+. +.|.+..+.+.+.++...+..+..++.|++.|| +|+|+.+.++.+...++.+.+....
T Consensus 220 ~~~~~~~~~~~~~~-~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r-~~~~~~l~~~~~~~~~~~~~~~~~~------ 291 (382)
T PRK11128 220 SHAAYYGFSAIYWQ-AAGYSASTIGYLWSLGVVAEVLIFAFSNRLFRR-WSARDLLLLSAICGVVRWGLMGSTT------ 291 (382)
T ss_pred HhHhHHHHHHHHHH-HCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHH-CCHHHHHHHHHHHHHHHHHHHHhhh------
Confidence 44445567788885 589999998988888888888889999999999 7999999998888877665543321
Q ss_pred CCccCCCCcCcCCCCchhhHHHHHHHHHHHHhhchhhhhhhhhhhccCCCccchhhHHHHHH-HHHHHHHHHHHHHHHhh
Q 045564 146 PQRCDIGLSLCKAPSKVQFAVLYSGIALACLGLGGLRFTLATMGANQFEIPQHQGIFFNWFF-ILTYASTVISSAAFVYI 224 (296)
Q Consensus 146 ~~~c~~~~~~~~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~~~ad~f~~~~~r~~~f~~~y-~~~~iG~~i~p~v~~~l 224 (296)
+.+.+++..++.|++.+...+....+..++.+ + ++++..+++. +...+|..+||.++|++
T Consensus 292 -----------------~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~g~~ig~~i~G~l 352 (382)
T PRK11128 292 -----------------ALPWLIVIQILHCGTFTVCHLAAMRYIAARPG-S-EVIRLQALYSALAMGGSIAIMTVLSGFL 352 (382)
T ss_pred -----------------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH-h-hhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34556777888888888888888888777643 3 4567777764 55667888999999999
Q ss_pred hccccchhhHHHHHHHHHHHHH
Q 045564 225 EDNLSWRLGSGLNIAANLAGVV 246 (296)
Q Consensus 225 ~~~~gw~~~F~i~~~~~~~~~~ 246 (296)
.|.+|+ ..|++.+++.+++++
T Consensus 353 ~~~~g~-~~~~~~~~~~~~~~~ 373 (382)
T PRK11128 353 YQHLGA-GVFWVMALVALPALF 373 (382)
T ss_pred HHhccH-HHHHHHHHHHHHHHH
Confidence 998887 456655555444443
No 147
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=99.15 E-value=4e-09 Score=101.97 Aligned_cols=152 Identities=11% Similarity=0.074 Sum_probs=107.3
Q ss_pred HHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhcchHHHHHHHHHHHHHHHHHHHhhccccCCCCCccCCCCcC
Q 045564 76 VYMIQEFHITSINSALISNIVNGFVNLFPVLGAIIADSFLGSFQVIWISSFISLLGTILLDSTATFDSLRPQRCDIGLSL 155 (296)
Q Consensus 76 ~yl~~~lg~s~~~a~~i~~~~~~~~~~~~l~~G~laDr~iGR~~~i~i~~~l~~ig~~~la~~~~~p~~~~~~c~~~~~~ 155 (296)
+++.+++|.+...+........+...++.+++|+++|| +|||+.++++.++..++.++++... .+.
T Consensus 295 p~i~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr-~g~r~~~i~~~~~~~v~~~~l~~~~-~~~------------ 360 (479)
T PRK10077 295 PEIFKTLGASTDIALLQTIIVGVINLTFTVLAIMTVDK-FGRKPLQIIGALGMAIGMFSLGTAF-YTQ------------ 360 (479)
T ss_pred HHHHHHcCCCCchHHHHHHHHHHHHHHHHHHHHHHHHH-hcChHHHHHhHHHHHHHHHHHHHHH-hcC------------
Confidence 34456789888777777777788889999999999999 7999999999998888877765432 100
Q ss_pred cCCCCchhhHHHHHHHHHHHHhhch-hhhhhhhhhhccCCCccchhhHHHHHHHHHHHHHHHHHHHHH------hhhccc
Q 045564 156 CKAPSKVQFAVLYSGIALACLGLGG-LRFTLATMGANQFEIPQHQGIFFNWFFILTYASTVISSAAFV------YIEDNL 228 (296)
Q Consensus 156 ~~~~~~~~~~~l~~~~~l~gig~g~-~~~~~~~~~ad~f~~~~~r~~~f~~~y~~~~iG~~i~p~v~~------~l~~~~ 228 (296)
... .....+..+.+++.+. ..+...+++.|.+|+ +.|+.+.++.+...++|..+++.+.+ ++.+..
T Consensus 361 -----~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~-~~r~~~~g~~~~~~~~g~~~~~~~~p~~~~~~~~~~~~ 433 (479)
T PRK10077 361 -----APG-IVALLSMLFYVAAFAMSWGPVCWVLLSEIFPN-AIRGKALAIAVAAQWIANYFVSWTFPMMDKNSWLVAHF 433 (479)
T ss_pred -----ccc-HHHHHHHHHHHHHHhccccchhHHHhHhhCCh-hHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccchhhhc
Confidence 011 1222333344444432 346778999999984 47999999988888888887754443 555678
Q ss_pred cchhhHHHHHHHHHHHHHHH
Q 045564 229 SWRLGSGLNIAANLAGVVIF 248 (296)
Q Consensus 229 gw~~~F~i~~~~~~~~~~~~ 248 (296)
+|++.|++.++..+++.++.
T Consensus 434 ~~~~~~~~~~~~~~~~~~~~ 453 (479)
T PRK10077 434 HNGFSYWIYGCMGVLAALFM 453 (479)
T ss_pred cCccHHHHHHHHHHHHHHHH
Confidence 89989988777655555443
No 148
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=99.14 E-value=2.9e-09 Score=103.99 Aligned_cols=172 Identities=11% Similarity=0.004 Sum_probs=123.0
Q ss_pred CCchhHHHHHH-HHH--HhHHHhHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhcc-----hHHHHH
Q 045564 51 GGRTALLSRTV-TCL--TLGEGWVANLMVYMIQEFHITSINSALISNIVNGFVNLFPVLGAIIADSFLG-----SFQVIW 122 (296)
Q Consensus 51 ~~~~~~~~l~~-~~~--~~~y~~~~~l~~yl~~~lg~s~~~a~~i~~~~~~~~~~~~l~~G~laDr~iG-----R~~~i~ 122 (296)
.+++....+++ ..+ ..-+.+...+..++++++|++.++.+...++..+...+-++ .|+++|| ++ ||+.++
T Consensus 22 ~~~~~~~~~~~~~y~~qGl~~l~~~~~~~~l~~~lg~s~~~i~~~~sl~~lpw~~K~l-~g~l~D~-~~i~G~rRr~~l~ 99 (468)
T TIGR00788 22 FHPRVVLAIGLQVLFVKGIAGLMRLPLSPMLTDDLGLDGARYQRLVGLSSLGWALKPF-AGVMSDT-FPLFGYTKRWYLV 99 (468)
T ss_pred CCcchHHHHHHHHHHHhhHHHHhhhhhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHh-cCCCCccchHHHH
Confidence 34555544444 445 32255667788899999999999998888888888888776 9999999 67 677777
Q ss_pred HHHHHHH-HHHHHHHhhccccCCCCCccCCCCcCcCCCCchhhHHHHHHHHHHHHhhchhhhhhhhhhhccCCCcc-chh
Q 045564 123 ISSFISL-LGTILLDSTATFDSLRPQRCDIGLSLCKAPSKVQFAVLYSGIALACLGLGGLRFTLATMGANQFEIPQ-HQG 200 (296)
Q Consensus 123 i~~~l~~-ig~~~la~~~~~p~~~~~~c~~~~~~~~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~~~ad~f~~~~-~r~ 200 (296)
++.++.. ++.. .++. .+ .......+.+++.+++.+.......++..|..+++. .++
T Consensus 100 ~~~~l~~~~~~~--~l~~-~~-------------------~~~~~~~~~~~l~~~~~a~~dv~~da~~~e~~~~~~~~~~ 157 (468)
T TIGR00788 100 LSGLLGSAILYG--LLPG-KV-------------------SSAKVAAAFIFLAALAKALYDVLVDSLYSERIRESPSAGP 157 (468)
T ss_pred HHHHHHHHHHHH--hccc-cc-------------------chHHHHHHHHHHHHHHHHHHHHhHHHHHhhhhhcCCCcCC
Confidence 7766552 2211 1111 00 112233346778899999999999999999998322 233
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhhccccchhhHHHHHHHHHHHHH
Q 045564 201 IFFNWFFILTYASTVISSAAFVYIEDNLSWRLGSGLNIAANLAGVV 246 (296)
Q Consensus 201 ~~f~~~y~~~~iG~~i~p~v~~~l~~~~gw~~~F~i~~~~~~~~~~ 246 (296)
...++.|.+.++|..+|+.++|++.+.++|+..|++.++..++..+
T Consensus 158 ~~~s~~~~~~~~G~~vg~~l~G~l~~~~~~~~~f~~~a~l~ll~~~ 203 (468)
T TIGR00788 158 SLVSWMWGASATGGLISSLLGGPLLDKTLTRILFLITAALLLLQLF 203 (468)
T ss_pred CeeeHHHHHHHHHHHHHHHHHHHHHHhcCcchHHHHHHHHHHHHHH
Confidence 3556667778899999999999999989999999998876665543
No 149
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=99.14 E-value=4e-13 Score=129.09 Aligned_cols=147 Identities=18% Similarity=0.242 Sum_probs=115.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhhcchHHHHHHHHHHHHHHHHHHHhhccccCCCCCccCCCCcCcCCCCchhhHHH
Q 045564 88 NSALISNIVNGFVNLFPVLGAIIADSFLGSFQVIWISSFISLLGTILLDSTATFDSLRPQRCDIGLSLCKAPSKVQFAVL 167 (296)
Q Consensus 88 ~a~~i~~~~~~~~~~~~l~~G~laDr~iGR~~~i~i~~~l~~ig~~~la~~~~~p~~~~~~c~~~~~~~~~~~~~~~~~l 167 (296)
..++..+...++..+|.+++|+++|| +|||+++.++.++..+|.++..++... .+...+
T Consensus 47 ~~~~~~~~~~~g~~~G~~~~g~~~d~-~GRk~~~~~~~~~~~i~~~~~~~~~~~--------------------~~~~~~ 105 (451)
T PF00083_consen 47 LSSLLTSSFFIGAIVGALIFGFLADR-YGRKPALIISALLMIIGSILIAFAPSY--------------------NNFWML 105 (451)
T ss_pred HHHHHHHHHHhhhccccccccccccc-ccccccccccccccccccccccccccc--------------------cccccc
Confidence 45678899999999999999999999 799999999999999988776654300 134678
Q ss_pred HHHHHHHHHhhchhhhhhhhhhhccCCCccchhhHHHHHHHHHHHHHHHHHHHHHhhhc---cccchhhHHHHHHHHHHH
Q 045564 168 YSGIALACLGLGGLRFTLATMGANQFEIPQHQGIFFNWFFILTYASTVISSAAFVYIED---NLSWRLGSGLNIAANLAG 244 (296)
Q Consensus 168 ~~~~~l~gig~g~~~~~~~~~~ad~f~~~~~r~~~f~~~y~~~~iG~~i~p~v~~~l~~---~~gw~~~F~i~~~~~~~~ 244 (296)
.++|++.|++.|+..+..+.++.|..|++ .|+...++......+|..++..+...+.+ +.+||+.+++..+..++.
T Consensus 106 ~~~R~~~G~~~g~~~~~~~~~~~E~~~~~-~R~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~Wr~~~~~~~~~~l~~ 184 (451)
T PF00083_consen 106 LIGRFLIGFGIGGAYVVSPIYISEIAPPK-HRGFLSSLFQLFWALGILLASLIGYIVSYYSDNWGWRILLIFGAIPSLLV 184 (451)
T ss_pred ccccccccccccccccccccccccccccc-cccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 89999999999999999999999999844 67888877788888888777765443322 346999998887755333
Q ss_pred H--HHHHhCCCchh
Q 045564 245 V--VIFLSGKHFYF 256 (296)
Q Consensus 245 ~--~~~~~~~~~~~ 256 (296)
+ ..+++++|||.
T Consensus 185 ~~~~~~~pESP~wL 198 (451)
T PF00083_consen 185 LLLRFFLPESPRWL 198 (451)
T ss_pred ccccccccccccee
Confidence 3 23567889886
No 150
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=99.13 E-value=1.5e-09 Score=106.44 Aligned_cols=161 Identities=11% Similarity=-0.018 Sum_probs=103.6
Q ss_pred hHHHhHHHHHHHHHHHhCCChhHHHH------------HHHHHHHHHHHHHHHHHHHhhhhcchHHHHHHHHHHHHHHHH
Q 045564 66 LGEGWVANLMVYMIQEFHITSINSAL------------ISNIVNGFVNLFPVLGAIIADSFLGSFQVIWISSFISLLGTI 133 (296)
Q Consensus 66 ~~y~~~~~l~~yl~~~lg~s~~~a~~------------i~~~~~~~~~~~~l~~G~laDr~iGR~~~i~i~~~l~~ig~~ 133 (296)
.+|++..++|+++. ++|++..+++. ...+..++..++.+++++++|| +|||++++++.++..++.+
T Consensus 303 ~~y~~~~~~p~i~~-~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~l~dr-~gRR~~l~~~~~~~~~~~~ 380 (502)
T TIGR00887 303 AFYGVNLNQKVILS-AIGYSPPAATNNAYEELYKTAVGNLIIALAGTVPGYWVTVFLVDI-IGRKPIQLMGFFILTVLFF 380 (502)
T ss_pred HHHccccccHHHHH-HHcCCCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh-hcchhHHHHHHHHHHHHHH
Confidence 67787777888884 67886543221 1233344556677889999999 7999999888877776665
Q ss_pred HHHhhccccCCCCCccCCCCcCcCCCCchhhHHHHHHHHHHHHhhchhhhhhhhhhhccCCCccchhhHHHHHHHHHHHH
Q 045564 134 LLDSTATFDSLRPQRCDIGLSLCKAPSKVQFAVLYSGIALACLGLGGLRFTLATMGANQFEIPQHQGIFFNWFFILTYAS 213 (296)
Q Consensus 134 ~la~~~~~p~~~~~~c~~~~~~~~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~~~ad~f~~~~~r~~~f~~~y~~~~iG 213 (296)
++.+... +. + .. ..+....+...++..+..+....+.+|.+|++ .|+++.++.+....+|
T Consensus 381 ~l~~~~~-~~---------------~--~~-~~~~~~~~~~~~~~~~~~~~~~~~~~E~~p~~-~R~~~~g~~~~~~~~~ 440 (502)
T TIGR00887 381 VLGFAYN-HL---------------S--TH-GFLAIYVLAQFFANFGPNATTFIVPGEVFPTR-YRSTAHGISAASGKAG 440 (502)
T ss_pred HHHHHHH-hc---------------c--hh-HHHHHHHHHHHHHhcCCCchhhhhhhccCchh-HHHHHHHHHHHHhhhH
Confidence 5544310 00 0 01 11111111122222234456667789999954 7999999999999999
Q ss_pred HHHHHHHHHhhhcc----------ccchhhHHHHHHHHHHHHHHH
Q 045564 214 TVISSAAFVYIEDN----------LSWRLGSGLNIAANLAGVVIF 248 (296)
Q Consensus 214 ~~i~p~v~~~l~~~----------~gw~~~F~i~~~~~~~~~~~~ 248 (296)
++++|.+.+++.+. .++...|++.+++.+++.+.+
T Consensus 441 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~i~~ 485 (502)
T TIGR00887 441 AIIGQFGFLYLAQHGDPTKGYPTGIWMGHVLEIFALFMFLGILFT 485 (502)
T ss_pred HHHHHHHhhhhhccccccccccccccchHHHHHHHHHHHHHHHHh
Confidence 99999999998773 344556777666655554433
No 151
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=99.13 E-value=3.5e-09 Score=104.75 Aligned_cols=149 Identities=13% Similarity=0.058 Sum_probs=122.8
Q ss_pred HhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhcchHHHHHHHHHHHHHHHHHHHhhccccCCCCCccCCCCcCcCCCC
Q 045564 81 EFHITSINSALISNIVNGFVNLFPVLGAIIADSFLGSFQVIWISSFISLLGTILLDSTATFDSLRPQRCDIGLSLCKAPS 160 (296)
Q Consensus 81 ~lg~s~~~a~~i~~~~~~~~~~~~l~~G~laDr~iGR~~~i~i~~~l~~ig~~~la~~~~~p~~~~~~c~~~~~~~~~~~ 160 (296)
++.-|+...+.+.....+-..+..+++|.++|| +.|||+++.+.++..+..+.+++......
T Consensus 39 ~lt~S~~~valv~~a~~LP~~Llsl~aG~laDr-~drrrili~~~~~~~~~~~~L~~l~~~~~----------------- 100 (524)
T PF05977_consen 39 QLTGSPLMVALVQAASTLPILLLSLFAGALADR-FDRRRILILSQLLRALVALLLAVLAFFGL----------------- 100 (524)
T ss_pred HHhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhc-ccchHHHHHHHHHHHHHHHHHHHHHHhCc-----------------
Confidence 456778888888888999999999999999999 79999999999888776666655432111
Q ss_pred chhhHHHHHHHHHHHHhhchhhhhhhhhhhccCCCccchhhHHHHHHHHHHHHHHHHHHHHHhhhccccchhhHHHHHHH
Q 045564 161 KVQFAVLYSGIALACLGLGGLRFTLATMGANQFEIPQHQGIFFNWFFILTYASTVISSAAFVYIEDNLSWRLGSGLNIAA 240 (296)
Q Consensus 161 ~~~~~~l~~~~~l~gig~g~~~~~~~~~~ad~f~~~~~r~~~f~~~y~~~~iG~~i~p~v~~~l~~~~gw~~~F~i~~~~ 240 (296)
.+.+.+++..++.|++.+...|...+.+.|+.|+ ++...+.++..+..|+.-.+||.++|.+....|-.+.|.+.++.
T Consensus 101 -~~~~~Ll~~~fl~g~~~a~~~PA~~A~ip~lV~~-~~L~~A~al~s~~~niar~iGPalgG~Lva~~G~~~~f~inals 178 (524)
T PF05977_consen 101 -LSPWLLLILTFLLGIGSAFFNPAWQAIIPELVPK-EDLPAANALNSISFNIARIIGPALGGILVAFFGAAAAFLINALS 178 (524)
T ss_pred -CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccH-hhHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHH
Confidence 2456778888999999999999999999999994 46778888899999999999999999998888888999998887
Q ss_pred HHHHHHHHH
Q 045564 241 NLAGVVIFL 249 (296)
Q Consensus 241 ~~~~~~~~~ 249 (296)
.++.++.+.
T Consensus 179 fl~~i~~l~ 187 (524)
T PF05977_consen 179 FLISILALL 187 (524)
T ss_pred HHHHHHHHH
Confidence 666554443
No 152
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=99.13 E-value=5.7e-09 Score=98.34 Aligned_cols=139 Identities=12% Similarity=0.072 Sum_probs=114.8
Q ss_pred hHHHhHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhcchHHHHHHHHHHHHHHHHHHHhhccccCCC
Q 045564 66 LGEGWVANLMVYMIQEFHITSINSALISNIVNGFVNLFPVLGAIIADSFLGSFQVIWISSFISLLGTILLDSTATFDSLR 145 (296)
Q Consensus 66 ~~y~~~~~l~~yl~~~lg~s~~~a~~i~~~~~~~~~~~~l~~G~laDr~iGR~~~i~i~~~l~~ig~~~la~~~~~p~~~ 145 (296)
........+.+.+++.++++..+++.+...+..+..++++..|++.+| +|+|+.++++..++++|..+..-++.
T Consensus 27 ~~~~l~diLip~l~~~f~ls~~~a~liqfaff~gYf~~~lpa~~~~kk-~gyk~gi~lgL~l~avg~~lF~pAa~----- 100 (422)
T COG0738 27 FITCLNDILIPHLKEVFDLTYFEASLIQFAFFGGYFIMSLPAGLLIKK-LGYKAGIVLGLLLYAVGAALFWPAAS----- 100 (422)
T ss_pred HHhhcchhhHHHHHHHhCccHHHHHHHHHHHHHHHHHHhccHHHHHHH-hhhHHHHHHHHHHHHHHHHHHhhhhh-----
Confidence 344456678889999999999999999999999999999999999999 79999999999999999876653321
Q ss_pred CCccCCCCcCcCCCCchhhHHHHHHHHHHHHhhchhhhhhhhhhhccCCCccchhhHHHHHHHHHHHHHHHHHHHHHhhh
Q 045564 146 PQRCDIGLSLCKAPSKVQFAVLYSGIALACLGLGGLRFTLATMGANQFEIPQHQGIFFNWFFILTYASTVISSAAFVYIE 225 (296)
Q Consensus 146 ~~~c~~~~~~~~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~~~ad~f~~~~~r~~~f~~~y~~~~iG~~i~p~v~~~l~ 225 (296)
......+++++++++.|.+..+...+++++.+.+++ .-..=.|.....+.+|+.++|++++++.
T Consensus 101 ---------------~~~y~~FL~~lFila~Gi~~LetaaNp~v~~lg~~~-~a~~rlnl~q~fn~lGa~~gp~~g~~li 164 (422)
T COG0738 101 ---------------SKSYGFFLVALFILASGIGLLETAANPYVTLLGKPE-SAAFRLNLAQAFNGLGAILGPLLGSSLI 164 (422)
T ss_pred ---------------hhhHHHHHHHHHHHHhhhHHHHhccchHHHHhCCch-hHHHHHHHHHHhhhhHHHHHHHHHHHHH
Confidence 135678899999999999999999999999999852 1222334445556789999999998887
Q ss_pred c
Q 045564 226 D 226 (296)
Q Consensus 226 ~ 226 (296)
.
T Consensus 165 l 165 (422)
T COG0738 165 L 165 (422)
T ss_pred H
Confidence 6
No 153
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=99.12 E-value=2.9e-09 Score=102.89 Aligned_cols=142 Identities=15% Similarity=0.047 Sum_probs=114.5
Q ss_pred hHHHhHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhcchHHHHHHHHHHHHHHHHHHHhhccccCCC
Q 045564 66 LGEGWVANLMVYMIQEFHITSINSALISNIVNGFVNLFPVLGAIIADSFLGSFQVIWISSFISLLGTILLDSTATFDSLR 145 (296)
Q Consensus 66 ~~y~~~~~l~~yl~~~lg~s~~~a~~i~~~~~~~~~~~~l~~G~laDr~iGR~~~i~i~~~l~~ig~~~la~~~~~p~~~ 145 (296)
.+++...+++.|+++.+|.+..+++.......++..++.+++|++.|| +|||+.+.++.++..++..++.+.. .|.
T Consensus 270 ~~~~~~~~~p~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r-~~~~~~~~~g~~~~~~~~~~~~~~~-~~~-- 345 (485)
T TIGR00711 270 GLYGSFYLLPLYLQQVLGYTALQAGLHILPVGLAPMLSSPIAGRMGDK-IDPRKLVTIGLILYAVGFYWRAFTF-TPD-- 345 (485)
T ss_pred HHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhh-cCcHHHHHHHHHHHHHHHHHHhccC-CCC--
Confidence 667777889999999999999999999999999999999999999999 7999999998888877776654221 110
Q ss_pred CCccCCCCcCcCCCCchhhHHHHHHHHHHHHhhchhhhhhhhhhhccCCCccchhhHHHHHHHHHHHHHHHHHHHHHhhh
Q 045564 146 PQRCDIGLSLCKAPSKVQFAVLYSGIALACLGLGGLRFTLATMGANQFEIPQHQGIFFNWFFILTYASTVISSAAFVYIE 225 (296)
Q Consensus 146 ~~~c~~~~~~~~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~~~ad~f~~~~~r~~~f~~~y~~~~iG~~i~p~v~~~l~ 225 (296)
.+...+....++.|+|.+...+.......+.+|+ +.|+++.+++++..++|+.+|+.+.+.+.
T Consensus 346 ----------------~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~g~~ig~~i~g~~~ 408 (485)
T TIGR00711 346 ----------------TPFLAIALPQFIRGFGMGCFFMPLTTIALSGLPP-HKIARGSSLSNFTRQLGGSIGTALITTIL 408 (485)
T ss_pred ----------------CCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCH-HHHhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1233455557788898888777777777787884 47899999999999999999999999887
Q ss_pred ccc
Q 045564 226 DNL 228 (296)
Q Consensus 226 ~~~ 228 (296)
++.
T Consensus 409 ~~~ 411 (485)
T TIGR00711 409 TNR 411 (485)
T ss_pred HHH
Confidence 653
No 154
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=99.12 E-value=9.2e-09 Score=95.78 Aligned_cols=164 Identities=16% Similarity=0.217 Sum_probs=140.9
Q ss_pred HhHHHhHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhcchHHHHHHHHHHHHHHHHHHHhhccccCC
Q 045564 65 TLGEGWVANLMVYMIQEFHITSINSALISNIVNGFVNLFPVLGAIIADSFLGSFQVIWISSFISLLGTILLDSTATFDSL 144 (296)
Q Consensus 65 ~~~y~~~~~l~~yl~~~lg~s~~~a~~i~~~~~~~~~~~~l~~G~laDr~iGR~~~i~i~~~l~~ig~~~la~~~~~p~~ 144 (296)
|.-......+..-+.+++|+|.+.++.+.++-.+...+..+++.+++-| +|-.+.+.++.++..+|.++=...
T Consensus 25 R~~itsvgPLL~~Ir~~~gls~s~aGlLTtLPll~fg~~ap~a~~Lar~-~g~er~l~~~Llli~~G~~iR~~~------ 97 (395)
T COG2807 25 RPAITSVGPLLDEIRQDLGLSFSVAGLLTTLPLLAFGLFAPAAPRLARR-FGEERSLFLALLLIAAGILIRSLG------ 97 (395)
T ss_pred chhhhhhhhhHHHHHHHhcccHHHHHHHHHHHHHHHHHHHhhhHHHHHH-HhhHHHHHHHHHHHHHHHHHHhcc------
Confidence 4444445677778889999999999999999999999999999999999 899999999999999887654332
Q ss_pred CCCccCCCCcCcCCCCchhhHHHHHHHHHHHHhhchhhhhhhhhhhccCCCccchhhHHHHHHHHHHHHHHHHHHHHHhh
Q 045564 145 RPQRCDIGLSLCKAPSKVQFAVLYSGIALACLGLGGLRFTLATMGANQFEIPQHQGIFFNWFFILTYASTVISSAAFVYI 224 (296)
Q Consensus 145 ~~~~c~~~~~~~~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~~~ad~f~~~~~r~~~f~~~y~~~~iG~~i~p~v~~~l 224 (296)
+...++.+-.+.|.|.+..+...|+.+-+-||+ +-+...+.|..+.++|+.+++.++..+
T Consensus 98 ------------------~~~~L~~gt~l~G~gIav~nVLLPslIK~~Fpk--~~~~mtglYs~sl~~~aaLaa~lavpl 157 (395)
T COG2807 98 ------------------GLPLLFLGTLLAGAGIAVINVLLPSLIKRDFPK--RVGLMTGLYSTSLGAGAALAAALAVPL 157 (395)
T ss_pred ------------------cHHHHHHHHHHHHhhHHHHHHhhhHHHHhhccc--chhhHHhHHHHHHHHHHHHHhhhhhHH
Confidence 246788899999999999999999999999993 467888999999999999999999999
Q ss_pred hccc-cchhhHHHHHHHHHHHHHHHHhCCCch
Q 045564 225 EDNL-SWRLGSGLNIAANLAGVVIFLSGKHFY 255 (296)
Q Consensus 225 ~~~~-gw~~~F~i~~~~~~~~~~~~~~~~~~~ 255 (296)
.++. |||....+.+...+++++++++...|+
T Consensus 158 a~~~~gW~~aL~~WAl~allAl~~WlPq~~r~ 189 (395)
T COG2807 158 AQHSGGWRGALGFWALLALLALLIWLPQALRE 189 (395)
T ss_pred HHhhccHHHHHHHHHHHHHHHHHHHhhhcccc
Confidence 8776 799999999998888888887775444
No 155
>TIGR00895 2A0115 benzoate transport.
Probab=99.12 E-value=3.7e-09 Score=98.47 Aligned_cols=133 Identities=14% Similarity=0.015 Sum_probs=102.1
Q ss_pred hHHHhHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhcchHHHHHHHHHHHHHHHHHHHhhccccCCC
Q 045564 66 LGEGWVANLMVYMIQEFHITSINSALISNIVNGFVNLFPVLGAIIADSFLGSFQVIWISSFISLLGTILLDSTATFDSLR 145 (296)
Q Consensus 66 ~~y~~~~~l~~yl~~~lg~s~~~a~~i~~~~~~~~~~~~l~~G~laDr~iGR~~~i~i~~~l~~ig~~~la~~~~~p~~~ 145 (296)
.++....+++ ++.+++|.+..+++...+...++..++.+++|+++|| +|||+.+....+....+.+ +....
T Consensus 265 ~~~~~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~~~-~~~~~------ 335 (398)
T TIGR00895 265 GVYFLTNWLP-KLMVELGFSLSLAATGGALFNFGGVIGSIIFGWLADR-LGPRVTALLLLLGAVFAVL-VGSTL------ 335 (398)
T ss_pred HHHHHHHHHH-HHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhh-cchHHHHHHHHHHHHHHHH-HHHHh------
Confidence 5555666666 6677899999999999999999999999999999999 7999555444333332222 21111
Q ss_pred CCccCCCCcCcCCCCchhhHHHHHHHHHHHHhhchhhhhhhhhhhccCCCccchhhHHHHHHHHHHHHHHHHHHHHHhh
Q 045564 146 PQRCDIGLSLCKAPSKVQFAVLYSGIALACLGLGGLRFTLATMGANQFEIPQHQGIFFNWFFILTYASTVISSAAFVYI 224 (296)
Q Consensus 146 ~~~c~~~~~~~~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~~~ad~f~~~~~r~~~f~~~y~~~~iG~~i~p~v~~~l 224 (296)
.+...+++..++.+++.+...+...++..|.+|+ +.|++.+++++...++|..++|.+.|++
T Consensus 336 ----------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~g~~~g~~~~G~l 397 (398)
T TIGR00895 336 ----------------FSPTLLLLLGAIAGFFVNGGQSGLYALMALFYPT-AIRATGVGWAIGIGRLGAIIGPILAGYL 397 (398)
T ss_pred ----------------hCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCH-HHHHHHHHHHHHHHHHHHHHHHHhHHhc
Confidence 1223456667788888888899999999999994 4789999999999999999999999876
No 156
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.11 E-value=1.4e-09 Score=106.63 Aligned_cols=147 Identities=10% Similarity=0.039 Sum_probs=117.8
Q ss_pred HHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhcchHHHHHHHHHHHHHHHHHHHhhccccCCCCCccCCCCcCcC
Q 045564 78 MIQEFHITSINSALISNIVNGFVNLFPVLGAIIADSFLGSFQVIWISSFISLLGTILLDSTATFDSLRPQRCDIGLSLCK 157 (296)
Q Consensus 78 l~~~lg~s~~~a~~i~~~~~~~~~~~~l~~G~laDr~iGR~~~i~i~~~l~~ig~~~la~~~~~p~~~~~~c~~~~~~~~ 157 (296)
+.+++|+...+-+.+.+++.++.+++.+.+|.+.|| +.-.+.+....+.+.+-.++....
T Consensus 72 ~~edl~~~~~~l~~~~t~F~v~Yii~~~p~~~L~~r-~~ls~~l~~~~~~w~~~~~~~~~~------------------- 131 (495)
T KOG2533|consen 72 LKEDLKLVGNQLGVLDTVFYVGYIIGQFPSGLLGDR-FPLSKGLSVSGILWGLFGFLTAAV------------------- 131 (495)
T ss_pred CccccchhhhhhhhHHHHHHHHHHHHHhhHHHHHHh-CChHHHHHHHHHHHHHHHHHHHHH-------------------
Confidence 346788888899999999999999999999999999 796666666555554422222111
Q ss_pred CCCchhhHHHHHHHHHHHHhhchhhhhhhhhhhccCCCccchhhHHHHHHHHHHHHHHHHHHHHHhhh------ccccch
Q 045564 158 APSKVQFAVLYSGIALACLGLGGLRFTLATMGANQFEIPQHQGIFFNWFFILTYASTVISSAAFVYIE------DNLSWR 231 (296)
Q Consensus 158 ~~~~~~~~~l~~~~~l~gig~g~~~~~~~~~~ad~f~~~~~r~~~f~~~y~~~~iG~~i~p~v~~~l~------~~~gw~ 231 (296)
.+.+.+++.|+++|+..+...|+...+++..|. +++|+.-+++++.+.++|.++|.+++..+. ...|||
T Consensus 132 ----~s~~~~ialr~llGl~es~~wP~~~~~lg~wy~-~~e~g~r~~~~~a~~~~g~i~ggliA~g~~~~~~~~~~~gW~ 206 (495)
T KOG2533|consen 132 ----HSFPGLIALRFLLGLFESGGWPGVVAILGNWYG-KSERGLRMGIWYASASLGNIFGGLIAYGVFKLNGSGGLAGWR 206 (495)
T ss_pred ----hhhHHHHHHHHHHHHHhcccchHHHHHHHhhcC-hhhhhhhHHHHHHhcchhhHHHHHHHHHhhhhcCCCCcCCce
Confidence 245779999999999999999999999999998 457899999999999999999999888763 356999
Q ss_pred hhHHHHHHHHHHHHHHHH
Q 045564 232 LGSGLNIAANLAGVVIFL 249 (296)
Q Consensus 232 ~~F~i~~~~~~~~~~~~~ 249 (296)
|.|.|.+++.++..++.+
T Consensus 207 ~~FiI~G~i~~~~gi~~f 224 (495)
T KOG2533|consen 207 WLFIIEGVITLVLGIVVF 224 (495)
T ss_pred eehhHHHHHHHHHHheEE
Confidence 999999987665554433
No 157
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.11 E-value=6.5e-09 Score=111.05 Aligned_cols=154 Identities=12% Similarity=0.013 Sum_probs=118.2
Q ss_pred hHHHhHHHHHHHHHHHhCCChh-HHHHHHHHHHHHHHHHHHHHHHHhhhhcchHHHHHHHHHHHHHHHHHHHhhccccCC
Q 045564 66 LGEGWVANLMVYMIQEFHITSI-NSALISNIVNGFVNLFPVLGAIIADSFLGSFQVIWISSFISLLGTILLDSTATFDSL 144 (296)
Q Consensus 66 ~~y~~~~~l~~yl~~~lg~s~~-~a~~i~~~~~~~~~~~~l~~G~laDr~iGR~~~i~i~~~l~~ig~~~la~~~~~p~~ 144 (296)
..+....+++.|+.+.+|++.. +++++.+...++..++.++.|+++|| +++++.+.++.++..++.+++.+..
T Consensus 247 ~~~~~~~~~~~~~~~~~g~s~~~~~g~~~~~~~ig~~~g~~~~g~l~~r-~~~~~~~~~~~~~~~~~~~~~~~~~----- 320 (1146)
T PRK08633 247 ISQLAQANFPAYAKEVLGLDNTFQVQYLLAASAIGIGIGSLLAGRLSGR-HIELGLVPLGALGLALSLFLLPTAP----- 320 (1146)
T ss_pred HHHHHHHhhHHHHHHHhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhCC-ceEccchhHHHHHHHHHHHHHHHhh-----
Confidence 4444567788999999999998 88999999999999999999999999 7999988888877776655544321
Q ss_pred CCCccCCCCcCcCCCCchhhHHHHHHHHHHHHhhchhhhhhhhhhhccCCCccchhhHHHHHHHHHHHHHHHHHHHHHhh
Q 045564 145 RPQRCDIGLSLCKAPSKVQFAVLYSGIALACLGLGGLRFTLATMGANQFEIPQHQGIFFNWFFILTYASTVISSAAFVYI 224 (296)
Q Consensus 145 ~~~~c~~~~~~~~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~~~ad~f~~~~~r~~~f~~~y~~~~iG~~i~p~v~~~l 224 (296)
+...++++.++.|++.++..+...+++.+..|++ .|+++++++++..++|..+++.+++.+
T Consensus 321 ------------------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~-~rg~~~~~~~~~~~lg~~~~~~~~~~l 381 (1146)
T PRK08633 321 ------------------SLASVLVLFFLFGFSAGLFIVPLNALIQFRAPEK-ELGKVLAANNFLQNVGMLLFLALTTLF 381 (1146)
T ss_pred ------------------hHHHHHHHHHHHHHHHHHhhHHHHHHHhhcCCcc-chhhhhHHHHHHHHHHHHHHHHHHHHH
Confidence 2345566677888888888888899999999844 789999999999999988888777666
Q ss_pred hc-cccchhhHHHHHHHHHHH
Q 045564 225 ED-NLSWRLGSGLNIAANLAG 244 (296)
Q Consensus 225 ~~-~~gw~~~F~i~~~~~~~~ 244 (296)
.. .+++...|++.+.+.++.
T Consensus 382 ~~~~~~~~~~~~~~~~~~~~~ 402 (1146)
T PRK08633 382 SGLGLSPAGLFYLIALVTLIG 402 (1146)
T ss_pred HHhccCHHHHHHHHHHHHHHH
Confidence 43 234555566555544333
No 158
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=99.11 E-value=5.1e-10 Score=106.76 Aligned_cols=155 Identities=16% Similarity=0.088 Sum_probs=109.8
Q ss_pred CChhHHHHHHHHHHHHHHHHHHHHHHHhhhhcchHHHHHHHHHHHHHHHHHHHhhccccCCCCCccCCCCcCcCCCCchh
Q 045564 84 ITSINSALISNIVNGFVNLFPVLGAIIADSFLGSFQVIWISSFISLLGTILLDSTATFDSLRPQRCDIGLSLCKAPSKVQ 163 (296)
Q Consensus 84 ~s~~~a~~i~~~~~~~~~~~~l~~G~laDr~iGR~~~i~i~~~l~~ig~~~la~~~~~p~~~~~~c~~~~~~~~~~~~~~ 163 (296)
+++...+.+..+..++..+|+++.||++|+ +|||+++...+++.++++++++++- +.++...-
T Consensus 81 ~ps~i~~~Vn~~A~vGti~GQl~FG~lgD~-~GRK~vYG~~liImIi~t~~~~~s~----------------~~~~~~~~ 143 (538)
T KOG0252|consen 81 YPSGVLALVNAAALVGTIFGQLFFGWLGDK-FGRKKVYGKELIIMIICSALSGLSV----------------GTTSPLGV 143 (538)
T ss_pred CCchHHHHHHHHHHHHHHHHHHHHHHHHhh-hcchhhhhHHHHHHHHHHHHhccCC----------------CCCCCcch
Confidence 667788889999999999999999999999 7999999999999999888554432 11121134
Q ss_pred hHHHHHHHHHHHHhhchhhhhhhhhhhccCCCccchhhHHHHHHHHHHH----HHHHHHHHHHhhhcc-----------c
Q 045564 164 FAVLYSGIALACLGLGGLRFTLATMGANQFEIPQHQGIFFNWFFILTYA----STVISSAAFVYIEDN-----------L 228 (296)
Q Consensus 164 ~~~l~~~~~l~gig~g~~~~~~~~~~ad~f~~~~~r~~~f~~~y~~~~i----G~~i~p~v~~~l~~~-----------~ 228 (296)
+..+..-|+++|+|.|+-.|...+..+|...+ .+|+...++.....+. |+.++-++..-.... .
T Consensus 144 m~~L~~~R~~LGiGIGGDYPlSAtI~SE~an~-~~RGa~iaavFa~Qg~GilaG~ivt~Iv~~~fe~~~~~~~~~~~ld~ 222 (538)
T KOG0252|consen 144 MMTLCFFRFLLGIGIGGDYPLSATIMSESANK-KTRGAFIAAVFAMQGFGILAGGIVALIVSAIFEKIFNGPSTYPHLDG 222 (538)
T ss_pred hhHHHHHHHHhhccccCCCcchHHHhhhhhhh-ccccceeEEEEEecchhHhhccHHHHHHHHHHhccCCCCCCchHHHH
Confidence 56678889999999999999999999997764 3677665553333333 444444443333221 2
Q ss_pred cchhhHHHHHHHHHHHHHH--HHhCCCchh
Q 045564 229 SWRLGSGLNIAANLAGVVI--FLSGKHFYF 256 (296)
Q Consensus 229 gw~~~F~i~~~~~~~~~~~--~~~~~~~~~ 256 (296)
=||..|.+.++..++.+.. -+.+++||.
T Consensus 223 vWRl~~glg~vpa~~~ly~Rl~M~Et~~Y~ 252 (538)
T KOG0252|consen 223 VWRIIFGLGAVPALLVLYFRLKMPETARYT 252 (538)
T ss_pred HHHHHHHHHHHHHHHHHHhhhcCCcchhHH
Confidence 3999998887755443322 234677886
No 159
>PRK10133 L-fucose transporter; Provisional
Probab=99.10 E-value=7.3e-09 Score=100.22 Aligned_cols=153 Identities=10% Similarity=0.018 Sum_probs=113.9
Q ss_pred hHHHhHHHHHHHH-HHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhcchHHHHHHHHHHHHHHHHHHHhhccccCC
Q 045564 66 LGEGWVANLMVYM-IQEFHITSINSALISNIVNGFVNLFPVLGAIIADSFLGSFQVIWISSFISLLGTILLDSTATFDSL 144 (296)
Q Consensus 66 ~~y~~~~~l~~yl-~~~lg~s~~~a~~i~~~~~~~~~~~~l~~G~laDr~iGR~~~i~i~~~l~~ig~~~la~~~~~p~~ 144 (296)
..++...+.+.|+ ++.+|+++.+++.....+.++..++.+++|++.|| +||||++.++.++..++.++..+. +
T Consensus 273 ~~~~~~~~~~~~l~~~~~g~s~~~ag~~~~~~~~~~~vG~~~~g~l~~r-~g~~~~l~~~~~~~~~~~~~~~~~---~-- 346 (438)
T PRK10133 273 AQTACWSYLIRYAVEEIPGMTAGFAANYLTGTMVCFFIGRFTGTWLISR-FAPHKVLAAYALIAMALCLISAFA---G-- 346 (438)
T ss_pred HHHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCHHHHHHHHHHHHHHHHHHHHHc---C--
Confidence 4555556778886 56789999999999999999999999999999999 799999998877766554433221 1
Q ss_pred CCCccCCCCcCcCCCCchhhHHHHHHHHHHHHhhchhhhhhhhhhhccCCCccchhhHHHHHHHHHHHHHHHHHHHHHhh
Q 045564 145 RPQRCDIGLSLCKAPSKVQFAVLYSGIALACLGLGGLRFTLATMGANQFEIPQHQGIFFNWFFILTYASTVISSAAFVYI 224 (296)
Q Consensus 145 ~~~~c~~~~~~~~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~~~ad~f~~~~~r~~~f~~~y~~~~iG~~i~p~v~~~l 224 (296)
+. ..+....+.+++.+...|...+...+.+|++...+++. ..+ ..+|+.++|.+.|++
T Consensus 347 ------------------~~-~~~~~~~l~glg~~~i~P~~~s~a~~~~~~~~~~as~l--~~~-~~~g~~~~~~i~G~l 404 (438)
T PRK10133 347 ------------------GH-VGLIALTLCSAFMSIQYPTIFSLGIKNLGQDTKYGSSF--IVM-TIIGGGIVTPVMGFV 404 (438)
T ss_pred ------------------Ch-HHHHHHHHHHHHHHHHHHHHHHHHHcccchhhccchhH--HhH-HhccchHHHHHHHHH
Confidence 01 12344567899999999999999999988543333333 323 335788889999999
Q ss_pred hcccc-chhhHHHHHHHHHHHHH
Q 045564 225 EDNLS-WRLGSGLNIAANLAGVV 246 (296)
Q Consensus 225 ~~~~g-w~~~F~i~~~~~~~~~~ 246 (296)
.+..| -+..|++..++.+...+
T Consensus 405 ~~~~g~~~~~~~v~~~~~~~~~~ 427 (438)
T PRK10133 405 SDAAGNIPTAELIPALCFAVIFI 427 (438)
T ss_pred HHhccchHHHHHHHHHHHHHHHH
Confidence 88887 68888877776554443
No 160
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=99.08 E-value=8.2e-09 Score=99.94 Aligned_cols=174 Identities=13% Similarity=0.069 Sum_probs=112.9
Q ss_pred hHHHHHHHHH--H-hHHHhHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhcchHHHHH---HHHHHH
Q 045564 55 ALLSRTVTCL--T-LGEGWVANLMVYMIQEFHITSINSALISNIVNGFVNLFPVLGAIIADSFLGSFQVIW---ISSFIS 128 (296)
Q Consensus 55 ~~~~l~~~~~--~-~~y~~~~~l~~yl~~~lg~s~~~a~~i~~~~~~~~~~~~l~~G~laDr~iGR~~~i~---i~~~l~ 128 (296)
.++...+..+ . .++....++|.|+.+.+|.+..+++...++..++..++.+++|+++|| +++|+... ...++.
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~d~-~~~~~~~~~~~~~~~~~ 340 (465)
T TIGR00894 262 PVWAIWFAIFGHFWLYTILPTYLPTFISWVLRVSGKENGLLSSLPYLFAWLCSIFAGYLADF-LKSSKTLSLTAARKIFN 340 (465)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcChHHhHHHHHHHHHHHHHHHHHHHHHHHH-HHHcCCCcHHHHHHHHH
Confidence 3444444444 5 777788899999999999999999999999999999999999999999 56543211 001111
Q ss_pred HHHH-----HHHHhhccccCCCCCccCCCCcCcCCCCchhhHHHHHHHHHHHHhhchhhhhhhhhhhccCCCccchhhHH
Q 045564 129 LLGT-----ILLDSTATFDSLRPQRCDIGLSLCKAPSKVQFAVLYSGIALACLGLGGLRFTLATMGANQFEIPQHQGIFF 203 (296)
Q Consensus 129 ~ig~-----~~la~~~~~p~~~~~~c~~~~~~~~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~~~ad~f~~~~~r~~~f 203 (296)
.++. ..+.... .. .+....++...+.+.+.++..+.......|..| + .++...
T Consensus 341 ~~~~~~~~~~~~~~~~-~~-------------------~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~-~-~~g~~~ 398 (465)
T TIGR00894 341 GIGGLGPGIFAYALPY-LS-------------------AAFYLTIIILTLANAVSSGPLAGVLINSLDLAP-R-FLGFIK 398 (465)
T ss_pred HHHHHHHHHHHHHHHH-cC-------------------CchHHHHHHHHHHHHHhhhhhhhhhhchhhcCh-h-HHHHHH
Confidence 1111 1111110 00 011222333334444444444444455556665 3 688899
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhccc---cchhhHHHHHHHHHHHHHHHHhC
Q 045564 204 NWFFILTYASTVISSAAFVYIEDNL---SWRLGSGLNIAANLAGVVIFLSG 251 (296)
Q Consensus 204 ~~~y~~~~iG~~i~p~v~~~l~~~~---gw~~~F~i~~~~~~~~~~~~~~~ 251 (296)
++.++..++|+.++|.+.+++.+.. +|..+|.+.++..+++.+++...
T Consensus 399 g~~~~~~~l~~~i~p~l~g~~~~~~~~~~~~~~f~~~~~~~~i~~i~~~~~ 449 (465)
T TIGR00894 399 GITGLPGFIGGLIASTLAGNILSQDSKNVWLIVFLIMAFVNILCVIFYLIF 449 (465)
T ss_pred HHHHHHHHHHHHHHHHhhheeeCCCCchHHHHHHHHHHHHHHHHHHHeeee
Confidence 9999999999999999999987653 48888888887777766555433
No 161
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=99.07 E-value=1.3e-09 Score=101.79 Aligned_cols=133 Identities=9% Similarity=0.008 Sum_probs=106.4
Q ss_pred HHhHHHHHHHHHHHhCC----ChhHHHHHHHHHHHHHHHHHHHHHHHhhhhcchHHHHHHHHHHHHHHHHHHHhhccccC
Q 045564 68 EGWVANLMVYMIQEFHI----TSINSALISNIVNGFVNLFPVLGAIIADSFLGSFQVIWISSFISLLGTILLDSTATFDS 143 (296)
Q Consensus 68 y~~~~~l~~yl~~~lg~----s~~~a~~i~~~~~~~~~~~~l~~G~laDr~iGR~~~i~i~~~l~~ig~~~la~~~~~p~ 143 (296)
|....++.-.+....+. +..-++.+-+.|.+...+.+++.|-+||| +|||+++.++.+..++.+++.+.+.
T Consensus 45 ~~~~~~~V~~F~~a~~~~~~~~~~yaGflGSsF~ilQ~~sS~~~G~~SD~-yGRkpvll~c~~~va~s~ll~~~S~---- 119 (451)
T KOG2615|consen 45 YPFVVFMVRDFNIAIGEPDGASVFYAGFLGSSFSILQFISSPLWGCLSDR-YGRKPVLLACLIGVALSYLLWALSR---- 119 (451)
T ss_pred hHHHHHhhHHHHHhhCCcccccchhhhhHhhHHHHHHHHhhhhhhhhhhh-hCchHHHHHHHHHHHHHHHHHHHHH----
Confidence 33344444444333333 33557889999999999999999999999 6999999999998888777766553
Q ss_pred CCCCccCCCCcCcCCCCchhhHHHHHHHHHHHHhhchhhhhhhhhhhccCCCccchhhHHHHHHHHHHHHHHHHHHHHHh
Q 045564 144 LRPQRCDIGLSLCKAPSKVQFAVLYSGIALACLGLGGLRFTLATMGANQFEIPQHQGIFFNWFFILTYASTVISSAAFVY 223 (296)
Q Consensus 144 ~~~~~c~~~~~~~~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~~~ad~f~~~~~r~~~f~~~y~~~~iG~~i~p~v~~~ 223 (296)
++..+.++|++.|+.-|- ...+-++++|.+++ +.|..+++....+..+|.++||.++||
T Consensus 120 -------------------~F~afv~aR~l~Gi~kgn-l~v~rAiisdV~se-k~r~l~ms~v~~a~~lGfilGPmIGgy 178 (451)
T KOG2615|consen 120 -------------------NFAAFVLARFLGGIFKGN-LSVIRAIISDVVSE-KYRPLGMSLVGTAFGLGFILGPMIGGY 178 (451)
T ss_pred -------------------HHHHHHHHHHhhhhccCc-hHHHHHHHHhhcCh-hhccceeeeeehhhhcchhhcchhhhH
Confidence 455677789999998884 46678899999995 478899999999999999999999999
Q ss_pred hhc
Q 045564 224 IED 226 (296)
Q Consensus 224 l~~ 226 (296)
+.+
T Consensus 179 la~ 181 (451)
T KOG2615|consen 179 LAQ 181 (451)
T ss_pred HHh
Confidence 987
No 162
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=99.06 E-value=2.3e-08 Score=95.01 Aligned_cols=151 Identities=10% Similarity=0.142 Sum_probs=102.4
Q ss_pred HHHHHHHHHhCCChhHHHHHHHHH-HHHHHHHHHHHHHHhhhhcchHHHHHHHHHHHHHHHHHHHhhccccCCCCCccCC
Q 045564 73 NLMVYMIQEFHITSINSALISNIV-NGFVNLFPVLGAIIADSFLGSFQVIWISSFISLLGTILLDSTATFDSLRPQRCDI 151 (296)
Q Consensus 73 ~l~~yl~~~lg~s~~~a~~i~~~~-~~~~~~~~l~~G~laDr~iGR~~~i~i~~~l~~ig~~~la~~~~~p~~~~~~c~~ 151 (296)
+.+.|+.+++|++..+.+.+.... .++..++.+++|+++|| +|||+.+.++.++..+..+.+......+
T Consensus 231 ~~~~~l~~~~G~~~~~~g~~~~~~~~~~~i~g~~~~g~l~~r-~g~~~~l~~~~~~~~l~~l~~~~~~~~~--------- 300 (402)
T PRK11902 231 LSTTFLIRGAGFSAGEVGIVNKTLGLAATIVGALAGGTLMVR-LGLYRSLMLFGVLQAVSNLGYWVLAVTP--------- 300 (402)
T ss_pred HHHHHHHHhcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHH-HhHHHHHHHHHHHHHHHHHHHHHHHhcC---------
Confidence 344577788999999988877654 45688899999999999 7999988877766655443332211111
Q ss_pred CCcCcCCCCchhhHHHHHHH----HHHHHhhchhhhhhhhhhhccCCCccchhhHHHHHHHHHHHHHHHHHHHHHhhhcc
Q 045564 152 GLSLCKAPSKVQFAVLYSGI----ALACLGLGGLRFTLATMGANQFEIPQHQGIFFNWFFILTYASTVISSAAFVYIEDN 227 (296)
Q Consensus 152 ~~~~~~~~~~~~~~~l~~~~----~l~gig~g~~~~~~~~~~ad~f~~~~~r~~~f~~~y~~~~iG~~i~p~v~~~l~~~ 227 (296)
.+.+.+++.. +..+++.+...+....+..+.+|.+ .++++....++|..+++.++|++.+.
T Consensus 301 ----------~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~l~~~~~~~~~G~l~~~ 365 (402)
T PRK11902 301 ----------KHLWTMALAIGIENLCGGMGTAAFVALLMALCNRSFSAT-----QYALLSALASVGRVYVGPTSGYLVEA 365 (402)
T ss_pred ----------CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHH-----HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0112333322 3455666667777777788777632 23444444567777667789999999
Q ss_pred ccchhhHHHHHHHHHHHHHHH
Q 045564 228 LSWRLGSGLNIAANLAGVVIF 248 (296)
Q Consensus 228 ~gw~~~F~i~~~~~~~~~~~~ 248 (296)
.||+..|.+.+++.++++++.
T Consensus 366 ~G~~~~f~~~~~~~~~~~~~~ 386 (402)
T PRK11902 366 YGWPGFYLMTVVIALPGLALL 386 (402)
T ss_pred hChHHHHHHHHHHHHHHHHHH
Confidence 999999999888776665443
No 163
>PRK09848 glucuronide transporter; Provisional
Probab=99.05 E-value=1e-08 Score=98.90 Aligned_cols=143 Identities=14% Similarity=0.116 Sum_probs=106.5
Q ss_pred hHHHhHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhcchHHHHHHHHHHHHHHHHHHHhhccccCCC
Q 045564 66 LGEGWVANLMVYMIQEFHITSINSALISNIVNGFVNLFPVLGAIIADSFLGSFQVIWISSFISLLGTILLDSTATFDSLR 145 (296)
Q Consensus 66 ~~y~~~~~l~~yl~~~lg~s~~~a~~i~~~~~~~~~~~~l~~G~laDr~iGR~~~i~i~~~l~~ig~~~la~~~~~p~~~ 145 (296)
.++......+.|+++.+|.+....+.......++..++.++.++++|| +|+|+++.++.++..++.+++.+.. .
T Consensus 243 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~l~~r-~g~~~~~~~g~~~~~i~~~~~~~~~---~-- 316 (448)
T PRK09848 243 STFAVSASSLFYVRYVLNDTGLFTVLVLVQNLVGTVASAPLVPGMVAR-IGKKNTFLIGALLGTCGYLLFFWVS---V-- 316 (448)
T ss_pred HHHHHhhhheeeEeeecCChHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCcHHHHHHHHHHHHHHHHHHHHcC---c--
Confidence 444445556667777788877665555554456677889999999999 7999999999988888776655321 0
Q ss_pred CCccCCCCcCcCCCCchhhHHHHHHHHHHHHhhchhhhhhhhhhhccCCCc------cchhhHHHHHHHHHHHHHHHHHH
Q 045564 146 PQRCDIGLSLCKAPSKVQFAVLYSGIALACLGLGGLRFTLATMGANQFEIP------QHQGIFFNWFFILTYASTVISSA 219 (296)
Q Consensus 146 ~~~c~~~~~~~~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~~~ad~f~~~------~~r~~~f~~~y~~~~iG~~i~p~ 219 (296)
.+.+.+++..++.++|.+...+...++.+|..|.+ ++++..++.+.+...+|..+|+.
T Consensus 317 ----------------~~~~~~~~~~~l~g~G~~~~~~~~~al~~~~~~~~~~~~g~r~~G~~~~~~~~~~klg~aig~~ 380 (448)
T PRK09848 317 ----------------WSLPVALVALAIASIGQGVTMTVMWALEADTVEYGEYLTGVRIEGLTYSLFSFTRKCGQAIGGS 380 (448)
T ss_pred ----------------hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHhhCccchhHHHHHHHHHHHHHHHHHHH
Confidence 12345566677889999999999999999988732 23577888899999999999999
Q ss_pred HHHhhhccccc
Q 045564 220 AFVYIEDNLSW 230 (296)
Q Consensus 220 v~~~l~~~~gw 230 (296)
+.+.+.+..||
T Consensus 381 i~g~~l~~~G~ 391 (448)
T PRK09848 381 IPAFILGLSGY 391 (448)
T ss_pred HHHHHHHHcCC
Confidence 88887655454
No 164
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.05 E-value=1.3e-08 Score=109.07 Aligned_cols=172 Identities=11% Similarity=-0.054 Sum_probs=119.6
Q ss_pred hHHHhHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhcchHHHHHHHHHHHHHHHHHHHhhccccCCC
Q 045564 66 LGEGWVANLMVYMIQEFHITSINSALISNIVNGFVNLFPVLGAIIADSFLGSFQVIWISSFISLLGTILLDSTATFDSLR 145 (296)
Q Consensus 66 ~~y~~~~~l~~yl~~~lg~s~~~a~~i~~~~~~~~~~~~l~~G~laDr~iGR~~~i~i~~~l~~ig~~~la~~~~~p~~~ 145 (296)
..+++.++++.|+.+.+|.+..+++.+.+.+.++..++.++.|+++|+ .++++.+.++.++..++.+.+.+.. .....
T Consensus 240 ~~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~g~l~~~-~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~ 317 (1140)
T PRK06814 240 VGAVVLSQLPLLAKETLGGDENVATLFLAVFSVGVAVGSFLASKLSEG-RITLLYVPIGALLMGLFGLDLAFAS-SSVPA 317 (1140)
T ss_pred HHHHHHHHhHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHhCC-ceeeeeehHHHHHHHHHHHHHHhcc-ccccc
Confidence 555667789999999999999999999999999999999999999998 5777766666655555444333320 00000
Q ss_pred CCccCCC-CcCcCCCCchhhHHHHHHHHHHHHhhchhhhhhhhhhhccCCCccchhhHHHHHHHHHHHHHHHHHHHHHhh
Q 045564 146 PQRCDIG-LSLCKAPSKVQFAVLYSGIALACLGLGGLRFTLATMGANQFEIPQHQGIFFNWFFILTYASTVISSAAFVYI 224 (296)
Q Consensus 146 ~~~c~~~-~~~~~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~~~ad~f~~~~~r~~~f~~~y~~~~iG~~i~p~v~~~l 224 (296)
+..-... ...... .+.+.++++.++.|++.+...+...+++.+..|++ .|++.++.+++..++|..+++++.+.+
T Consensus 318 ~~~~~~~~~~~~~~---~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~-~~G~v~g~~~~~~~~~~~ig~~~~g~l 393 (1140)
T PRK06814 318 EPAQLKSILVFLSK---RHGWRILIDLFGLAAAGGLYIVPLFAALQAWANPA-HRARVIAANNVLNAAFMVAGTIILALL 393 (1140)
T ss_pred ccccccchhhhhcc---cccHHHHHHHHHHHHHHHHhHHHHHHHHHhhCCcc-cceeeeHHHHHHHHHHHHHHHHHHHHH
Confidence 0000000 000000 12345666777889999998889999999999844 789999999999999999999999988
Q ss_pred hc-cccchhhHHHHHHHHHH
Q 045564 225 ED-NLSWRLGSGLNIAANLA 243 (296)
Q Consensus 225 ~~-~~gw~~~F~i~~~~~~~ 243 (296)
.+ ..++...|++.+++.++
T Consensus 394 ~~~~~~~~~~~~~~~~~~~~ 413 (1140)
T PRK06814 394 QALGFSIPWIILFIALANLI 413 (1140)
T ss_pred HHhccCHHHHHHHHHHHHHH
Confidence 74 34666666655554333
No 165
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=99.04 E-value=3.6e-09 Score=104.26 Aligned_cols=155 Identities=19% Similarity=0.182 Sum_probs=126.3
Q ss_pred HHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhcchHHHHHHHHHHHHHHHHHHHhhccccCCCCCccCCC
Q 045564 73 NLMVYMIQEFHITSINSALISNIVNGFVNLFPVLGAIIADSFLGSFQVIWISSFISLLGTILLDSTATFDSLRPQRCDIG 152 (296)
Q Consensus 73 ~l~~yl~~~lg~s~~~a~~i~~~~~~~~~~~~l~~G~laDr~iGR~~~i~i~~~l~~ig~~~la~~~~~p~~~~~~c~~~ 152 (296)
.+...+.++++.+..+.+++.++..+...+..++.+.+.|| +|.|++.+.|.++..+|.++.+++.
T Consensus 67 v~~~~~~~~f~~s~~~~~~i~sl~~~~~~~~gpl~s~l~~r-fg~R~v~i~G~~v~~~g~~lssF~~------------- 132 (509)
T KOG2504|consen 67 LLFEELMDYFGSSSSQIAWIGSLLLGVYLLAGPLVSALCNR-FGCRTVMIAGGLVAALGLLLSSFAT------------- 132 (509)
T ss_pred hhHHHHHHHhCCCccHHHHHHHHHHHHHHHhccHHHHHHhh-cCchHHHHHHHHHHHHHHHHHHHHh-------------
Confidence 34457788999999999999999999999999999999999 7999999999999999999877764
Q ss_pred CcCcCCCCchhhHHHHHH-HHHHHHhhchhhhhhhhhhhccCCCccchhhHHHHHHHHHHHHHHHHHHHHHhhhccccch
Q 045564 153 LSLCKAPSKVQFAVLYSG-IALACLGLGGLRFTLATMGANQFEIPQHQGIFFNWFFILTYASTVISSAAFVYIEDNLSWR 231 (296)
Q Consensus 153 ~~~~~~~~~~~~~~l~~~-~~l~gig~g~~~~~~~~~~ad~f~~~~~r~~~f~~~y~~~~iG~~i~p~v~~~l~~~~gw~ 231 (296)
+.+.+++. =++.|+|.|.........++..|+ ++|+.+.++-..+..+|..+=|.+..++.+++|||
T Consensus 133 ----------~i~~l~lt~gvi~G~G~~~~~~paiviv~~YF~--kkR~lA~Gia~~GsG~G~~~~~~l~~~l~~~~G~r 200 (509)
T KOG2504|consen 133 ----------SLWQLYLTFGVIGGLGLGLIYLPAVVILGTYFE--KKRALATGIAVSGTGVGTVVFPPLLKYLLSKYGWR 200 (509)
T ss_pred ----------hHHHHHHHHHHHhhccchhhhcchhhhhhhHhH--HHHHHHHhhhhccCCcceeeHHHHHHHHHHHhCcH
Confidence 23344433 467889999999888888898886 35777777666667788888888899999999999
Q ss_pred hhHHHHHHHHHHHHHHHHhCCC
Q 045564 232 LGSGLNIAANLAGVVIFLSGKH 253 (296)
Q Consensus 232 ~~F~i~~~~~~~~~~~~~~~~~ 253 (296)
+.+++...+.+-.++.-...+|
T Consensus 201 ~~~l~~~~~~l~~~~~~~~~rp 222 (509)
T KOG2504|consen 201 GALLIFGGISLNVLVAGALLRP 222 (509)
T ss_pred HHHHHHHHHHHHHHHHHHHcCC
Confidence 9999988877555555555555
No 166
>PRK09669 putative symporter YagG; Provisional
Probab=99.03 E-value=5.4e-09 Score=100.83 Aligned_cols=164 Identities=11% Similarity=0.060 Sum_probs=111.3
Q ss_pred hHHHhHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhh---cchHH-HHHHHHHHHHHHHHHHHhhccc
Q 045564 66 LGEGWVANLMVYMIQEFHITSINSALISNIVNGFVNLFPVLGAIIADSF---LGSFQ-VIWISSFISLLGTILLDSTATF 141 (296)
Q Consensus 66 ~~y~~~~~l~~yl~~~lg~s~~~a~~i~~~~~~~~~~~~l~~G~laDr~---iGR~~-~i~i~~~l~~ig~~~la~~~~~ 141 (296)
.+..+..+++.|+++.+|++...++.+.++.-+...+..|+.|+++||. +|||| .++++.+...+..+++.. .
T Consensus 24 ~~~~~~~~l~~~~t~~~gls~~~~g~i~~i~~i~dai~dp~~G~lsD~~~~r~Grrrp~il~~~~~~~i~~~l~f~---~ 100 (444)
T PRK09669 24 VWQTVMLFLAYFYTDVFGLSAAIMGTMFLVVRVLDAVTDPLMGALVDRTRTRHGQFRPYLLWFAIPFGVVCLLTFY---T 100 (444)
T ss_pred HHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHcccceeeEeeecCCCCCCCcchhHHHHHHHHHHHHHHHHh---C
Confidence 4444567889999999999999999999999999999999999999992 47755 455666666665443322 2
Q ss_pred cCCCCCccCCCCcCcCCCCchhhHHHHHHHHHHHHhhchhhhhhhhhhhccCCCccchhhHHHHHHHHHHHHHHHHHHHH
Q 045564 142 DSLRPQRCDIGLSLCKAPSKVQFAVLYSGIALACLGLGGLRFTLATMGANQFEIPQHQGIFFNWFFILTYASTVISSAAF 221 (296)
Q Consensus 142 p~~~~~~c~~~~~~~~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~~~ad~f~~~~~r~~~f~~~y~~~~iG~~i~p~v~ 221 (296)
|.+. .......+++...+.+++......+..++.+|+.++.++|.+..++.....++|..+++.+.
T Consensus 101 p~~~--------------~~~~~~~~~~~~~l~~~~~t~~~ip~~al~~~~t~~~~eR~~l~~~r~~~~~~G~~i~~~~~ 166 (444)
T PRK09669 101 PDFG--------------ATGKIIYACVTYILLSLVYTAINVPYCAMPGAITNDPRERHSLQSWRFALSFIGGLIVSVIA 166 (444)
T ss_pred CCCC--------------cchHHHHHHHHHHHHHHHHHhhcchHHHhHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3211 01123334444455565565666777788999887556788888887777888877776544
Q ss_pred Hhhhc-------cccchhhHHHHHHHHHHHHH
Q 045564 222 VYIED-------NLSWRLGSGLNIAANLAGVV 246 (296)
Q Consensus 222 ~~l~~-------~~gw~~~F~i~~~~~~~~~~ 246 (296)
..+.. ..||+..+.+.+++.++..+
T Consensus 167 ~pl~~~~~~~~~~~g~~~~~~i~~ii~~v~~~ 198 (444)
T PRK09669 167 LPLVDILGKGDEQKGYFYAMMVMGLLGVVLFF 198 (444)
T ss_pred HHHHHHhCCCchhhhHHHHHHHHHHHHHHHHH
Confidence 33321 24677777766665544443
No 167
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=99.03 E-value=1.3e-08 Score=99.90 Aligned_cols=140 Identities=11% Similarity=-0.041 Sum_probs=113.7
Q ss_pred hHHHhHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhcchHHHHHHHHHHHHHHHHHHHhhccccCCC
Q 045564 66 LGEGWVANLMVYMIQEFHITSINSALISNIVNGFVNLFPVLGAIIADSFLGSFQVIWISSFISLLGTILLDSTATFDSLR 145 (296)
Q Consensus 66 ~~y~~~~~l~~yl~~~lg~s~~~a~~i~~~~~~~~~~~~l~~G~laDr~iGR~~~i~i~~~l~~ig~~~la~~~~~p~~~ 145 (296)
..++...+++.|+++.+|.+..+++.......++..++.+++|++.|| +|||+.+..+.++..++.+++.... .
T Consensus 274 ~~~~~~~~~~~~lq~v~g~s~~~ag~~~~~~~~~~~~~~~~~g~l~~r-~g~~~~~~~g~~~~~~~~~~l~~~~-~---- 347 (495)
T PRK14995 274 TLVGFELLMAQELQFVHGLSPLEAGMFMLPVMVASGFSGPIAGILVSR-LGLRLVATGGMALSALSFYGLAMTD-F---- 347 (495)
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCchHHHHHHHHHHHHHHHHHHHhc-C----
Confidence 566667788999999999999999999999999999999999999999 7999999888888877776554321 0
Q ss_pred CCccCCCCcCcCCCCchhhHHHHHHHHHHHHhhchhhhhhhhhhhccCCCccchhhHHHHHHHHHHHHHHHHHHHHHhhh
Q 045564 146 PQRCDIGLSLCKAPSKVQFAVLYSGIALACLGLGGLRFTLATMGANQFEIPQHQGIFFNWFFILTYASTVISSAAFVYIE 225 (296)
Q Consensus 146 ~~~c~~~~~~~~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~~~ad~f~~~~~r~~~f~~~y~~~~iG~~i~p~v~~~l~ 225 (296)
. .+....++..++.|+|.|...+.......+..|+ ++++.+.+.+++..++|+.+|+.+.+.+.
T Consensus 348 -------------~--~~~~~~~~~~~l~G~g~g~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~lG~~~G~ai~g~i~ 411 (495)
T PRK14995 348 -------------S--TQQWQAWGLMALLGFSAASALLASTSAIMAAAPP-EKAAAAGAIETMAYELGAGLGIAIFGLLL 411 (495)
T ss_pred -------------C--CchHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCH-HhcchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0 1123345567788999998888888888888884 46888889999999999999999998886
Q ss_pred cc
Q 045564 226 DN 227 (296)
Q Consensus 226 ~~ 227 (296)
++
T Consensus 412 ~~ 413 (495)
T PRK14995 412 SR 413 (495)
T ss_pred HH
Confidence 53
No 168
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=99.03 E-value=9.6e-09 Score=92.99 Aligned_cols=151 Identities=15% Similarity=0.121 Sum_probs=112.8
Q ss_pred CchhHHHHHHHHH--H-hHHHhHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhcchHHHHHHHHH-H
Q 045564 52 GRTALLSRTVTCL--T-LGEGWVANLMVYMIQEFHITSINSALISNIVNGFVNLFPVLGAIIADSFLGSFQVIWISSF-I 127 (296)
Q Consensus 52 ~~~~~~~l~~~~~--~-~~y~~~~~l~~yl~~~lg~s~~~a~~i~~~~~~~~~~~~l~~G~laDr~iGR~~~i~i~~~-l 127 (296)
.....+.+..+.+ - +.+-..+--+.++++.+|+|+..++.+.+...+...+.+++.|.++|+ .||+-..+.+.. .
T Consensus 262 f~ppfw~~~iicv~yyva~fPFi~lg~~fF~~rfGlS~~~a~~i~s~vy~Isav~spvfg~i~Dk-~G~n~~wv~~a~~~ 340 (459)
T KOG4686|consen 262 FYPPFWVLVIICVLYYVAWFPFITLGPMFFQKRFGLSAVSAGNILSTVYGISAVLSPVFGAISDK-YGFNLWWVASACIL 340 (459)
T ss_pred cCccHHHHHHHHHHHHHHHHHHhhhhHHHHHHhhCCChhhccchhhhhhhhhhhhhhhHHHhHhh-hcceehhHHHHHHH
Confidence 3334444444443 3 444445666779999999999999999999999999999999999999 699987766654 4
Q ss_pred HHHHHHHHHhhccccCCCCCccCCCCcCcCCCCchhhHHHHHHHHHHHHhhchhhhhhhhhhhccCCCccchhhHHHHHH
Q 045564 128 SLLGTILLDSTATFDSLRPQRCDIGLSLCKAPSKVQFAVLYSGIALACLGLGGLRFTLATMGANQFEIPQHQGIFFNWFF 207 (296)
Q Consensus 128 ~~ig~~~la~~~~~p~~~~~~c~~~~~~~~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~~~ad~f~~~~~r~~~f~~~y 207 (296)
..+++..++++. ..-++++.++|+..........+.++.+.||+ ..+++|+..+
T Consensus 341 tl~~H~~l~Ft~-------------------------lsPy~~m~~lGLsysllAcslWP~va~~vpE~-qLGTaygf~q 394 (459)
T KOG4686|consen 341 TLLGHSGLFFTF-------------------------LSPYTSMTFLGLSYSLLACSLWPCVASLVPEE-QLGTAYGFIQ 394 (459)
T ss_pred HHHHhhhHHhhh-------------------------ccHHHHHHHHhhhHHHHHHHHhhhhhhhCCHH-HhcchHHHHH
Confidence 555666555442 23456666777776665555666677777744 7899999999
Q ss_pred HHHHHHHHHHHHHHHhhhcccc
Q 045564 208 ILTYASTVISSAAFVYIEDNLS 229 (296)
Q Consensus 208 ~~~~iG~~i~p~v~~~l~~~~g 229 (296)
-..|+|-.+.|+++|.|.+.-|
T Consensus 395 sIqNLgla~i~Iiag~i~d~~g 416 (459)
T KOG4686|consen 395 SIQNLGLAFIPIIAGFIADGDG 416 (459)
T ss_pred HHHhhhhhHHhhhhheeecCCC
Confidence 9999999999999999988654
No 169
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.02 E-value=2.2e-08 Score=96.21 Aligned_cols=144 Identities=15% Similarity=0.090 Sum_probs=95.3
Q ss_pred hHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhcch-HHHHHHHHHHHHHHHHHHHhhccccCCCCCc
Q 045564 70 WVANLMVYMIQEFHITSINSALISNIVNGFVNLFPVLGAIIADSFLGS-FQVIWISSFISLLGTILLDSTATFDSLRPQR 148 (296)
Q Consensus 70 ~~~~l~~yl~~~lg~s~~~a~~i~~~~~~~~~~~~l~~G~laDr~iGR-~~~i~i~~~l~~ig~~~la~~~~~p~~~~~~ 148 (296)
..++++.|+.+++|++..+.+++.+++.++..++++++|.++|| +|| |+++.++.++..++..+..+..
T Consensus 21 ~~~~l~~~l~~~~g~s~~~iGl~~a~~~~~~~i~~~~~g~l~dr-~g~~r~~~~~~~~~~~~~~~~~~~~~--------- 90 (418)
T TIGR00889 21 WLVTLGSYMSKTLHFSGAEIGWVYSSTGIAAILMPILVGIIADK-WLSAQKVYAVCHFAGALLLFFAAQVT--------- 90 (418)
T ss_pred HHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hcccHHHHHHHHHHHHHHHHHHHHhc---------
Confidence 45889999999999999999999999999999999999999999 665 7788877776666554433221
Q ss_pred cCCCCcCcCCCCchhhHHHHHHHHHHHHhhchhhhhhhhhh----h----ccCCCccchhhHHHHHHHHHHHHHHHHHHH
Q 045564 149 CDIGLSLCKAPSKVQFAVLYSGIALACLGLGGLRFTLATMG----A----NQFEIPQHQGIFFNWFFILTYASTVISSAA 220 (296)
Q Consensus 149 c~~~~~~~~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~~~----a----d~f~~~~~r~~~f~~~y~~~~iG~~i~p~v 220 (296)
+...+++.+++.+++.+...+...+.. . |... +..|.+.++ .+|..+||.+
T Consensus 91 --------------~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~g~~~~~-~~~~~r~~G------~lG~~ig~~l 149 (418)
T TIGR00889 91 --------------TPAGMFPVLLANSLAYMPTIALTNSISYANLPQAGLDVVT-DFPPIRVMG------TIGFIAAMWA 149 (418)
T ss_pred --------------CHHHHHHHHHHHHHHHccHHHHHHHHHHHHHhhcCCCchh-cCCCeeeeh------hHHHHHHHHH
Confidence 234556667777776655554443332 1 2111 112333333 3678888888
Q ss_pred HHhhhccccchhhHHHHHHHHHHHH
Q 045564 221 FVYIEDNLSWRLGSGLNIAANLAGV 245 (296)
Q Consensus 221 ~~~l~~~~gw~~~F~i~~~~~~~~~ 245 (296)
++.+....+|. +|++.++..++.+
T Consensus 150 ~g~l~~~~~~~-~f~~~~~~~~~~~ 173 (418)
T TIGR00889 150 VSLLDIELSNI-QLYITAGSSALLG 173 (418)
T ss_pred HHHhcccchhH-HHHHHHHHHHHHH
Confidence 88884433344 4666555444433
No 170
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=99.01 E-value=7.1e-08 Score=91.82 Aligned_cols=152 Identities=9% Similarity=-0.115 Sum_probs=107.3
Q ss_pred hHHHhHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhcchHHHHHHHHHHHHHHHHHHHhhccccCCC
Q 045564 66 LGEGWVANLMVYMIQEFHITSINSALISNIVNGFVNLFPVLGAIIADSFLGSFQVIWISSFISLLGTILLDSTATFDSLR 145 (296)
Q Consensus 66 ~~y~~~~~l~~yl~~~lg~s~~~a~~i~~~~~~~~~~~~l~~G~laDr~iGR~~~i~i~~~l~~ig~~~la~~~~~p~~~ 145 (296)
..++...+.++++.+++|++..+.+.+...+.++..++.++.|++.|| .+| +.+.++.++..+...++....
T Consensus 231 ~~~~~~~~~~p~~~~~~g~s~~~~g~~~~~~~~~~iig~~~~~~l~~r-~~~-~~l~~~~~~~~~~~~~l~~~~------ 302 (394)
T PRK10213 231 GQFAFFTYIRPVYMNLAGFGVDGLTLVLLSFGIASFVGTSLSSFILKR-SVK-LALAGAPLVLAVSALVLTLWG------ 302 (394)
T ss_pred HHHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHhc-cch-hHHHHHHHHHHHHHHHHHHHh------
Confidence 455555666455556789999999998999999999999999999999 454 444444444333322222111
Q ss_pred CCccCCCCcCcCCCCchhhHHHHHHHHHHHHhhchhhhhhhhhhhccCCCccchhhHHHHHHHHHHHHHHHHHHHHHhhh
Q 045564 146 PQRCDIGLSLCKAPSKVQFAVLYSGIALACLGLGGLRFTLATMGANQFEIPQHQGIFFNWFFILTYASTVISSAAFVYIE 225 (296)
Q Consensus 146 ~~~c~~~~~~~~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~~~ad~f~~~~~r~~~f~~~y~~~~iG~~i~p~v~~~l~ 225 (296)
.+.+.+.+..++.|++.+...+...+++.+..|++ ++...+.++...++|..+||.++|++.
T Consensus 303 ----------------~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~lg~~~G~~l~G~l~ 364 (394)
T PRK10213 303 ----------------SDKIVATGVAIIWGLTFALVPVGWSTWITRSLADQ--AEKAGSIQVAVIQLANTCGAAIGGYAL 364 (394)
T ss_pred ----------------hhHHHHHHHHHHHHHHHHhhhHHHHHHHHHHCccc--HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 12345556677888888888888888888888733 445556666777899999999999999
Q ss_pred ccccchhhHHHHHHHHHH
Q 045564 226 DNLSWRLGSGLNIAANLA 243 (296)
Q Consensus 226 ~~~gw~~~F~i~~~~~~~ 243 (296)
+..|++..|...+++..+
T Consensus 365 ~~~g~~~~~~~~~~~~~~ 382 (394)
T PRK10213 365 DNIGLTSPLMLSGTLMLL 382 (394)
T ss_pred hccChhhHHHHHHHHHHH
Confidence 988988888877665443
No 171
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=98.98 E-value=4.3e-08 Score=97.03 Aligned_cols=154 Identities=16% Similarity=0.105 Sum_probs=127.1
Q ss_pred hHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhcchHHHHHHHHHHHHHHHHHHHhhccccCCCCCcc
Q 045564 70 WVANLMVYMIQEFHITSINSALISNIVNGFVNLFPVLGAIIADSFLGSFQVIWISSFISLLGTILLDSTATFDSLRPQRC 149 (296)
Q Consensus 70 ~~~~l~~yl~~~lg~s~~~a~~i~~~~~~~~~~~~l~~G~laDr~iGR~~~i~i~~~l~~ig~~~la~~~~~p~~~~~~c 149 (296)
+...+|.+..+.+|.+...-+.+.+.+.++..++.++.+++.+| +++++.+..+.+++.++.+.+++..
T Consensus 237 ~~aLlPl~a~~~l~~~a~~yGll~a~~gvGai~Gal~~~~l~~~-~~~~~lv~~~~~~~a~~~~~lal~~---------- 305 (524)
T PF05977_consen 237 VWALLPLFARDVLGGGASGYGLLLAAFGVGAILGALLLPRLRRR-LSSRRLVLLASLLFALALLLLALSP---------- 305 (524)
T ss_pred HHHhhhHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhcc-cCcchhhHHHHHHHHHHHHHHhcch----------
Confidence 44567888889999999999999999999999999999999999 7999999888888877666655442
Q ss_pred CCCCcCcCCCCchhhHHHHHHHHHHHHhhchhhhhhhhhhhccCCCccchhhHHHHHHHHHHHHHHHHHHHHHhhhcccc
Q 045564 150 DIGLSLCKAPSKVQFAVLYSGIALACLGLGGLRFTLATMGANQFEIPQHQGIFFNWFFILTYASTVISSAAFVYIEDNLS 229 (296)
Q Consensus 150 ~~~~~~~~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~~~ad~f~~~~~r~~~f~~~y~~~~iG~~i~p~v~~~l~~~~g 229 (296)
+.+..++..++.|++.........+.+-...| ++.|++.++++.+..+.+..+|.++.|++.+.+|
T Consensus 306 -------------~~~~~~~~l~l~G~~~~~~~~~~~t~~Q~~~P-~~~~GRv~si~~~~~~g~~~lGsll~G~la~~~g 371 (524)
T PF05977_consen 306 -------------SFWLALIALFLAGAAWIIANSSLNTLVQLSVP-DWVRGRVFSIYQMVFFGGMPLGSLLWGFLADHFG 371 (524)
T ss_pred -------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC-HHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 33455666778888888777777888878888 5589999999999988899999999999999999
Q ss_pred chhhHHHHHHHHHHHHHHH
Q 045564 230 WRLGSGLNIAANLAGVVIF 248 (296)
Q Consensus 230 w~~~F~i~~~~~~~~~~~~ 248 (296)
-+..+.+.++.++++.++.
T Consensus 372 ~~~al~~a~~~lll~~~~~ 390 (524)
T PF05977_consen 372 VRTALLIAGAALLLSALIA 390 (524)
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 9988888877665555544
No 172
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=98.98 E-value=1.8e-08 Score=95.62 Aligned_cols=161 Identities=17% Similarity=0.143 Sum_probs=130.4
Q ss_pred H-hHHHhHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhcchHHHHHHHHHHHHHHHHHHHhhccccC
Q 045564 65 T-LGEGWVANLMVYMIQEFHITSINSALISNIVNGFVNLFPVLGAIIADSFLGSFQVIWISSFISLLGTILLDSTATFDS 143 (296)
Q Consensus 65 ~-~~y~~~~~l~~yl~~~lg~s~~~a~~i~~~~~~~~~~~~l~~G~laDr~iGR~~~i~i~~~l~~ig~~~la~~~~~p~ 143 (296)
+ +.-++.+....|..+.+|++..+...+.....+...++.+++|++.|| +|-|+++.++.+++.+..+..-+..
T Consensus 265 ~DGv~til~~~~~fg~~~~gls~~~lll~g~~~~vvA~lg~ii~g~Ld~r-fg~k~vl~~~lvi~~~~~~~~~~~~---- 339 (438)
T COG2270 265 IDGVNTILAMGGVFGAADLGLSSTELLLIGIALSVVAALGAIIAGFLDER-FGSKPVLMIGLVILSIAALYLIFLE---- 339 (438)
T ss_pred HhhHHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCCceeehHHHHHHHHHHHHHHHcc----
Confidence 6 777788888899999999999999999999999999999999999999 8999999999988877444332211
Q ss_pred CCCCccCCCCcCcCCCCchhhHHHHHHHHHHHHhhchhhhhhhhhhhccCCCccchhhHHHHHHHHHHHHHHHHHHHHHh
Q 045564 144 LRPQRCDIGLSLCKAPSKVQFAVLYSGIALACLGLGGLRFTLATMGANQFEIPQHQGIFFNWFFILTYASTVISSAAFVY 223 (296)
Q Consensus 144 ~~~~~c~~~~~~~~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~~~ad~f~~~~~r~~~f~~~y~~~~iG~~i~p~v~~~ 223 (296)
....+++.-.+.|...|+.++..-++.+++.|++ +-+.+|++|.+..-.++.+||...+.
T Consensus 340 -------------------~~~~f~i~gll~g~s~G~~qA~SRSy~~~lvp~~-k~~~fFglyaltgra~S~~gp~lv~v 399 (438)
T COG2270 340 -------------------GELDFWILGLLVGTSLGGAQASSRSYLARLVPKG-KEGRFFGLYALTGRAASFLGPFLVAV 399 (438)
T ss_pred -------------------ccHHHHHHHHHHHHhcchHHHHHHHHHHHhCCCc-cccceeehhhhhhhHHHHHHHHHHHH
Confidence 1123445556889999999999999999999944 56889999999999999999999998
Q ss_pred hhcccc-chhhHHHHHHHHHHHHHHHHh
Q 045564 224 IEDNLS-WRLGSGLNIAANLAGVVIFLS 250 (296)
Q Consensus 224 l~~~~g-w~~~F~i~~~~~~~~~~~~~~ 250 (296)
+.+.+| -|.++..-.+..++++++++.
T Consensus 400 ~t~iTg~~r~g~~~i~vll~iGl~~L~~ 427 (438)
T COG2270 400 ITQITGSSRAGVLSIIVLLLIGLLLLLR 427 (438)
T ss_pred HHHHhcchhhHHHHHHHHHHhhHhhEEe
Confidence 887654 577777666666677765543
No 173
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=98.97 E-value=4.7e-08 Score=95.19 Aligned_cols=173 Identities=16% Similarity=0.072 Sum_probs=110.8
Q ss_pred HHHHHHHHH-H--hHHHhHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhcchHHHHHHHHHHHHHHH
Q 045564 56 LLSRTVTCL-T--LGEGWVANLMVYMIQEFHITSINSALISNIVNGFVNLFPVLGAIIADSFLGSFQVIWISSFISLLGT 132 (296)
Q Consensus 56 ~~~l~~~~~-~--~~y~~~~~l~~yl~~~lg~s~~~a~~i~~~~~~~~~~~~l~~G~laDr~iGR~~~i~i~~~l~~ig~ 132 (296)
.+.+.+..+ + ++.+...++|.|+++.+ +.........+..+...+..+++|++||| +||+|++.++.+...++.
T Consensus 254 ~Wllslly~~tFG~fvg~s~~lp~~~~~~~--~~~~~l~~~~l~~l~~~l~rplgG~LADR-iG~~~vl~~~~i~~~i~~ 330 (462)
T PRK15034 254 LWLLSLLYLATFGSFIGFSAGFAMLAKTQF--PDVNILRLAFFGPFIGAIARSVGGAISDK-FGGVRVTLINFIFMAIFS 330 (462)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHc--ChHHHHHHHHHHHHHHHHHHHhhHHHHHh-cCchHHHHHHHHHHHHHH
Confidence 344444445 3 55556668888988765 33333444555677888899999999999 799999999888776655
Q ss_pred HHHHhhccccCCCCCccCCCCcCcCCCCchhhHHHHHHHHHHHHhhchhhhhhhhhhhccCCC------c----------
Q 045564 133 ILLDSTATFDSLRPQRCDIGLSLCKAPSKVQFAVLYSGIALACLGLGGLRFTLATMGANQFEI------P---------- 196 (296)
Q Consensus 133 ~~la~~~~~p~~~~~~c~~~~~~~~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~~~ad~f~~------~---------- 196 (296)
....+. +|.- +..++..+.+..+.+.+..|.-+..+.-++.+.||+ +
T Consensus 331 ~~~~l~--lp~~---------------~~~~~~~~~~~~~~l~~~~G~gngsvfk~ip~~f~~~~~~~~~~~~~~~~~~~ 393 (462)
T PRK15034 331 ALLFLT--LPGT---------------GSGNFIAFYAVFMGLFLTAGLGSGSTFQMIAVIFRQITIYRVKMKGGSDEQAQ 393 (462)
T ss_pred HHHHHH--hccc---------------cccHHHHHHHHHHHHHHHhcccchHHHHhhHHHHhhhhhhcccccccchhHHh
Confidence 432222 2210 012345555555555555565566666666666662 0
Q ss_pred ----cchhhHHHHHHHHHHHHHHHHHHHHHhhhccc-cchhhHHHHHHHHHHHHHHH
Q 045564 197 ----QHQGIFFNWFFILTYASTVISSAAFVYIEDNL-SWRLGSGLNIAANLAGVVIF 248 (296)
Q Consensus 197 ----~~r~~~f~~~y~~~~iG~~i~p~v~~~l~~~~-gw~~~F~i~~~~~~~~~~~~ 248 (296)
++-+...++......+|+.+-|.+.++..+.. ++..+|++..+..++.+++-
T Consensus 394 ~~~~~~~g~v~G~v~a~G~~Ggf~~p~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~ 450 (462)
T PRK15034 394 REAVTETAAALGFISAIGAVGGFFIPQAFGMSLNMTGSPVGAMKVFLIFYIVCVLLT 450 (462)
T ss_pred hHHHHHHHHHHHHHHHHHHcccchhhHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHH
Confidence 13456667667777788888887877776654 47778888877766655553
No 174
>PRK10429 melibiose:sodium symporter; Provisional
Probab=98.96 E-value=2.6e-08 Score=97.15 Aligned_cols=162 Identities=9% Similarity=0.025 Sum_probs=108.4
Q ss_pred hHHHhHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhh----hhcchH-HHHHHHHHHHHHHHHHHHhhcc
Q 045564 66 LGEGWVANLMVYMIQEFHITSINSALISNIVNGFVNLFPVLGAIIAD----SFLGSF-QVIWISSFISLLGTILLDSTAT 140 (296)
Q Consensus 66 ~~y~~~~~l~~yl~~~lg~s~~~a~~i~~~~~~~~~~~~l~~G~laD----r~iGR~-~~i~i~~~l~~ig~~~la~~~~ 140 (296)
.+..+..+++.|+++.+|++...++.+..+.-+...+..|+.|+++| | +||| +-++++.+...++..++..+
T Consensus 21 ~~~~~~~~l~~yyt~v~Gls~~~vg~i~~i~ri~dai~dp~~G~lsD~t~sr-~Grrrp~il~g~i~~~i~~~llf~~-- 97 (473)
T PRK10429 21 AIGIVYMYLMYYYTDVVGLSVGLVGTLFLVARIWDAINDPIMGWIVNNTRSR-WGKFKPWILIGTLANSVVLFLLFSA-- 97 (473)
T ss_pred HHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhhchheeehhcCCCC-CCCcchhHhhhhHHHHHHHHHHHcC--
Confidence 44445678899999999999999999999999999999999999999 5 5985 45666777666655444221
Q ss_pred ccCCCCCccCCCCcCcCCCCchhhHHHHHHHHHHHHhhchhhhhhhhhhhccCCCccchhhHHHHHHHHHHHHHHHHHHH
Q 045564 141 FDSLRPQRCDIGLSLCKAPSKVQFAVLYSGIALACLGLGGLRFTLATMGANQFEIPQHQGIFFNWFFILTYASTVISSAA 220 (296)
Q Consensus 141 ~p~~~~~~c~~~~~~~~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~~~ad~f~~~~~r~~~f~~~y~~~~iG~~i~p~v 220 (296)
|.. +.......+++...+..++......+..++.+|+.++.++|.+.+++-.+..++|+.+.+.+
T Consensus 98 -p~~--------------~~~~~~~~~~~~~~l~~~~~t~~~ip~~al~~~lt~~~~eR~~l~~~~~~~~~ig~~~~~~~ 162 (473)
T PRK10429 98 -HLF--------------EGTAQYVFVCVTYILWGMTYTIMDIPFWSLVPTLTLDKREREQLVPYPRFFASLAGFVTAGF 162 (473)
T ss_pred -CCC--------------CccHHHHHHHHHHHHHHHHHHHHcchHHhhhHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 211 00112233344445566777777888888999998656678888888666667776665544
Q ss_pred HHhhhc-------cccchhhHHHHHHHHHHHH
Q 045564 221 FVYIED-------NLSWRLGSGLNIAANLAGV 245 (296)
Q Consensus 221 ~~~l~~-------~~gw~~~F~i~~~~~~~~~ 245 (296)
...+.+ ..+|++...+.+++.++..
T Consensus 163 ~~~~~~~~g~~~~~~g~~~~~~i~~~~~~~~~ 194 (473)
T PRK10429 163 TLPFVNYVGGGDRGFGFQMFTLVLIAFFIVST 194 (473)
T ss_pred HHHHHHHhCCCchhhhHHHHHHHHHHHHHHHH
Confidence 433221 1245555555555444433
No 175
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=98.96 E-value=3.8e-08 Score=93.85 Aligned_cols=153 Identities=10% Similarity=-0.038 Sum_probs=103.6
Q ss_pred hHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhcchHHHHHHHHHHHHHHHHHHHhhccccCCCCCcc
Q 045564 70 WVANLMVYMIQEFHITSINSALISNIVNGFVNLFPVLGAIIADSFLGSFQVIWISSFISLLGTILLDSTATFDSLRPQRC 149 (296)
Q Consensus 70 ~~~~l~~yl~~~lg~s~~~a~~i~~~~~~~~~~~~l~~G~laDr~iGR~~~i~i~~~l~~ig~~~la~~~~~p~~~~~~c 149 (296)
...++|.|+++..| ++.+.+.+.++..+...++....+++.||.++.++.+..+.++..++.+++....
T Consensus 227 ~~~~~p~~~~~~~~-~~~~~g~l~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~---------- 295 (400)
T PRK11646 227 VMLMLPIMVNDIAG-SPSAVKWMYAIEACLSLTLLYPIARWSEKRFRLEHRLMAGLLIMSLSMFPIGMVS---------- 295 (400)
T ss_pred HHHhhhhhHHhhcC-CchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHhh----------
Confidence 44567888876655 6677777766666555544444456655536767777777777776655444321
Q ss_pred CCCCcCcCCCCchhhHHHHHHHHHHHHhhchhhhhhhhhhhccCCCccchhhHHHHHHHHHHHHHHHHHHHHHhhhccc-
Q 045564 150 DIGLSLCKAPSKVQFAVLYSGIALACLGLGGLRFTLATMGANQFEIPQHQGIFFNWFFILTYASTVISSAAFVYIEDNL- 228 (296)
Q Consensus 150 ~~~~~~~~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~~~ad~f~~~~~r~~~f~~~y~~~~iG~~i~p~v~~~l~~~~- 228 (296)
+...+.+..++.+++.+...|...+...+..|+ +.|++.+++++...++|..+||.+.|++.+..
T Consensus 296 -------------~~~~~~~~~~l~~~g~~~~~p~~~~~~~~~~p~-~~~g~~~g~~~~~~~~g~~ig~~l~G~l~~~~~ 361 (400)
T PRK11646 296 -------------NLQQLFTLICLFYIGSIIAEPARETLSASLADA-RARGSYMGFSRLGLALGGAIGYIGGGWLFDLGK 361 (400)
T ss_pred -------------hHHHHHHHHHHHHHHHHHHHccHHHHHHhcCCc-ccchhhhhHHHHHHHHHHHhcccchHHHHHHHh
Confidence 123344455667788888888889999999984 47899999999999999999999999998764
Q ss_pred --c-chhhHHHHHHHHHHHHHH
Q 045564 229 --S-WRLGSGLNIAANLAGVVI 247 (296)
Q Consensus 229 --g-w~~~F~i~~~~~~~~~~~ 247 (296)
+ ....|++..++.+++.+.
T Consensus 362 ~~~~~~~~~~~~~~~~~~~~~~ 383 (400)
T PRK11646 362 ALNQPELPWMMLGIIGLITLLA 383 (400)
T ss_pred hcCCcchHHHHHHHHHHHHHHH
Confidence 2 244555544444444433
No 176
>PRK10054 putative transporter; Provisional
Probab=98.95 E-value=3.1e-08 Score=94.34 Aligned_cols=152 Identities=9% Similarity=-0.061 Sum_probs=110.2
Q ss_pred HHHHHHHHHHH--hCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhcchHHHHHHHHHHHHHHHHHHHhhccccCCCCCc
Q 045564 71 VANLMVYMIQE--FHITSINSALISNIVNGFVNLFPVLGAIIADSFLGSFQVIWISSFISLLGTILLDSTATFDSLRPQR 148 (296)
Q Consensus 71 ~~~l~~yl~~~--lg~s~~~a~~i~~~~~~~~~~~~l~~G~laDr~iGR~~~i~i~~~l~~ig~~~la~~~~~p~~~~~~ 148 (296)
..+.+.|+... .+.+....+.+...+........++.|++.|| .|||+.+.++.++..++.+.+.+..
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~--------- 295 (395)
T PRK10054 226 ASCISQYVMVVADSDFAEKVVAVVLPVNAAMVVSLQYSVGRRLNA-ANIRPLMTAGTLCFVIGLVGFIFSG--------- 295 (395)
T ss_pred hhhHHHHHHHhcccchHHHHHHHHHHhhhhheeeehhHHHHHHcc-CCchhHHHHHHHHHHHHHHHHHHcc---------
Confidence 34555565433 34555566667777777667777888999999 7999999988888877766554321
Q ss_pred cCCCCcCcCCCCchhhHHHHHHHHHHHHhhchhhhhhhhhhhccCCCccchhhHHHHHHHHHHHHHHHHHHHHHhhhccc
Q 045564 149 CDIGLSLCKAPSKVQFAVLYSGIALACLGLGGLRFTLATMGANQFEIPQHQGIFFNWFFILTYASTVISSAAFVYIEDNL 228 (296)
Q Consensus 149 c~~~~~~~~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~~~ad~f~~~~~r~~~f~~~y~~~~iG~~i~p~v~~~l~~~~ 228 (296)
.+.+.+++..++.++|.+...|...+.+.+..|+ +.|++.++... ...+|..+||.++|++.|..
T Consensus 296 -------------~~~~~~~~~~~~~~~g~~~~~p~~~~~~~~~~p~-~~~~~~~~~~~-~~~~G~~~Gp~~~G~l~~~~ 360 (395)
T PRK10054 296 -------------NSLLLWGMSAAVFTVGEIIYAPGEYMLIDHIAPP-GMKASYFSAQS-LGWLGAAINPLVSGVILTTL 360 (395)
T ss_pred -------------hHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCCc-ccceehHhHHH-HHHHHHHHHHHHHHHHHHHc
Confidence 1234455667788888888888888889898884 46778887644 55689999999999999999
Q ss_pred cchhhHHHHHHHHHHHHHH
Q 045564 229 SWRLGSGLNIAANLAGVVI 247 (296)
Q Consensus 229 gw~~~F~i~~~~~~~~~~~ 247 (296)
|....|++.+++..++.++
T Consensus 361 g~~~~~~~~~~~~~~~~~~ 379 (395)
T PRK10054 361 PPWSLFVILALAIVAAWLL 379 (395)
T ss_pred ChhhHHHHHHHHHHHHHHH
Confidence 9888888766655554443
No 177
>PRK10429 melibiose:sodium symporter; Provisional
Probab=98.93 E-value=8e-08 Score=93.70 Aligned_cols=157 Identities=9% Similarity=-0.043 Sum_probs=105.6
Q ss_pred hhHHHHHHHHH--H-hHHHhHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhcchHHHHHHHHHHHHH
Q 045564 54 TALLSRTVTCL--T-LGEGWVANLMVYMIQEFHITSINSALISNIVNGFVNLFPVLGAIIADSFLGSFQVIWISSFISLL 130 (296)
Q Consensus 54 ~~~~~l~~~~~--~-~~y~~~~~l~~yl~~~lg~s~~~a~~i~~~~~~~~~~~~l~~G~laDr~iGR~~~i~i~~~l~~i 130 (296)
|.+..+++..+ . ..+......+.|.+..++ +....+.+..+..+...++.++.++++|| +|||+++.++.++.++
T Consensus 231 ~~~~~ll~~~~~~~~~~~~~~~~~~y~~~y~~~-~~~~~~~~~~~~~i~~ii~~~~~~~l~~r-~gkk~~~~~~~~~~~~ 308 (473)
T PRK10429 231 DQLSCLLGMALAYNIASNIINGFAIYYFTYVIG-DADLFPYYLSYAGAANLVTLILFPRLVKS-LSRRILWAGASIFPVL 308 (473)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhheeeEEEEECC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCcHHHHHHHHHHHHH
Confidence 44444444444 3 444344444444443344 44555566666667888889999999999 7999999988887776
Q ss_pred HHHHHHhhccccCCCCCccCCCCcCcCCCCchhhHHHHHHHHHHHHhhchhhhhhhhhhhccCCC------ccchhhHHH
Q 045564 131 GTILLDSTATFDSLRPQRCDIGLSLCKAPSKVQFAVLYSGIALACLGLGGLRFTLATMGANQFEI------PQHQGIFFN 204 (296)
Q Consensus 131 g~~~la~~~~~p~~~~~~c~~~~~~~~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~~~ad~f~~------~~~r~~~f~ 204 (296)
+.+.+.+....+ ..+...+++..++.+++.+...+...++++|..+. +++.+..++
T Consensus 309 ~~~~~~~~~~~~------------------~~~~~~~~i~~~l~g~~~~~~~~~~~am~ad~id~~e~~tG~R~~G~~~s 370 (473)
T PRK10429 309 SCGVLLLMGLAA------------------PHNALLIVIAGILLNIGTALFWVLQVIMVADTVDYGEYKLGIRCESIAYS 370 (473)
T ss_pred HHHHHHHHhccC------------------chhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhHhcCccchhHHHH
Confidence 655543321011 01234556666778889998889999999999661 223455778
Q ss_pred HHHHHHHHHHHHHHHHHHhhhccccc
Q 045564 205 WFFILTYASTVISSAAFVYIEDNLSW 230 (296)
Q Consensus 205 ~~y~~~~iG~~i~p~v~~~l~~~~gw 230 (296)
...+...+|..+++.+.|++.+..|+
T Consensus 371 ~~~~~~K~~~al~~~i~g~~l~~~Gy 396 (473)
T PRK10429 371 VQTMVVKGGSAFAAFFIGVVLGLIGY 396 (473)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 88888899999999999988765554
No 178
>PRK09669 putative symporter YagG; Provisional
Probab=98.93 E-value=1.2e-07 Score=91.47 Aligned_cols=120 Identities=8% Similarity=-0.045 Sum_probs=88.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhcchHHHHHHHHHHHHHHHHHHHhhccccCCCCCccCCCCcCcCCCCchhhHHHH
Q 045564 89 SALISNIVNGFVNLFPVLGAIIADSFLGSFQVIWISSFISLLGTILLDSTATFDSLRPQRCDIGLSLCKAPSKVQFAVLY 168 (296)
Q Consensus 89 a~~i~~~~~~~~~~~~l~~G~laDr~iGR~~~i~i~~~l~~ig~~~la~~~~~p~~~~~~c~~~~~~~~~~~~~~~~~l~ 168 (296)
.+.+.....+...++.+++++++|| +|||+.+.++.++..++.+.+.+. + ..+...++
T Consensus 266 ~~~~~~~~~i~~ii~~~~~~~l~~r-~gk~~~~~~~~~~~~~~~~~~~~~---~------------------~~~~~~~~ 323 (444)
T PRK09669 266 ATLFLVTGMIAGLFGALLSERLLGK-FDRVRAFKWTIVAFVILSALIFFI---P------------------PSNVWLIF 323 (444)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH-hChHHHHHHHHHHHHHHHHHHHHh---C------------------cchHHHHH
Confidence 3445555667777888899999999 799999998877665433322211 1 02345566
Q ss_pred HHHHHHHHhhchhhhhhhhhhhccCCC------ccchhhHHHHHHHHHHHHHHHHHHHHHhhhccccc
Q 045564 169 SGIALACLGLGGLRFTLATMGANQFEI------PQHQGIFFNWFFILTYASTVISSAAFVYIEDNLSW 230 (296)
Q Consensus 169 ~~~~l~gig~g~~~~~~~~~~ad~f~~------~~~r~~~f~~~y~~~~iG~~i~p~v~~~l~~~~gw 230 (296)
+..++.+++.+...+...++++|..+. +++.+..++.+.++..+|..+|+.++|++.+..|+
T Consensus 324 ~~~~i~g~~~~~~~~~~~am~ad~~d~~e~~~G~r~~g~~~s~~~~~~klg~alg~~i~g~ll~~~Gy 391 (444)
T PRK09669 324 ALNILFNFIQNLTTPLQWSMFSDVVDYEEKRSGRRLDGLVFSTNLFAIKLGLAIGGAVVGWILAWVDY 391 (444)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhcCcCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 777889999999999999999999861 22345577888899999999999999988776666
No 179
>PF13347 MFS_2: MFS/sugar transport protein
Probab=98.92 E-value=6.8e-08 Score=92.77 Aligned_cols=142 Identities=14% Similarity=0.047 Sum_probs=112.4
Q ss_pred hHHHhHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhcchHHHHHHHHHHHHHHHHHHHhhccccCCC
Q 045564 66 LGEGWVANLMVYMIQEFHITSINSALISNIVNGFVNLFPVLGAIIADSFLGSFQVIWISSFISLLGTILLDSTATFDSLR 145 (296)
Q Consensus 66 ~~y~~~~~l~~yl~~~lg~s~~~a~~i~~~~~~~~~~~~l~~G~laDr~iGR~~~i~i~~~l~~ig~~~la~~~~~p~~~ 145 (296)
+.....+..+.|.+..+|.+ ...+.+..+..+...++.++.++++|| +|+||++..+.++.+++.+++.+...
T Consensus 240 ~~~~~~~~~~y~~~~vl~~~-~~~~~~~~~~~~~~~v~~~~~~~l~~r-~gk~~~~~~~~~~~~~~~~~~~~~~~----- 312 (428)
T PF13347_consen 240 AFALMNTFLPYYFTYVLGNE-GLISIFMLIFFVASIVGSPLWGRLSKR-FGKKKVYIIGLLLAALGFLLLFFLGP----- 312 (428)
T ss_pred hhhhhhhHHHHHHHHHhcCc-hhhHHHHHHHHHHHHHHHHHHHHHHHH-ccceeehhhhHHHHHHHHHHHHHHHh-----
Confidence 34334556667777778877 455667778888899999999999999 79999999999999998887665420
Q ss_pred CCccCCCCcCcCCCCchhhHHHHHHHHHHHHhhchhhhhhhhhhhccCCC------ccchhhHHHHHHHHHHHHHHHHHH
Q 045564 146 PQRCDIGLSLCKAPSKVQFAVLYSGIALACLGLGGLRFTLATMGANQFEI------PQHQGIFFNWFFILTYASTVISSA 219 (296)
Q Consensus 146 ~~~c~~~~~~~~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~~~ad~f~~------~~~r~~~f~~~y~~~~iG~~i~p~ 219 (296)
.+.+.+++..++.+++.+...+...++++|..+. +++.+..++.+.+...+|..+++.
T Consensus 313 ----------------~~~~~~~i~~~l~gi~~~~~~~~~~a~~ad~id~~e~~tg~r~~g~~~s~~~~~~k~~~~la~~ 376 (428)
T PF13347_consen 313 ----------------GSPWLVLILFILAGIGYGAFFVIPWAMLADVIDYDEWKTGRRREGMYFSVNSFFIKIGQGLAGA 376 (428)
T ss_pred ----------------hhHHHHHHHHHHhHhhhcccccccccccccchhhHHHhcCCCchHHHHHhhhhhhHHHHHHHHH
Confidence 1346777888899999999999999999999982 234577888899999999999999
Q ss_pred HHHhhhccccc
Q 045564 220 AFVYIEDNLSW 230 (296)
Q Consensus 220 v~~~l~~~~gw 230 (296)
+.+.+.+..|+
T Consensus 377 i~g~~l~~~Gy 387 (428)
T PF13347_consen 377 IVGLLLALVGY 387 (428)
T ss_pred HHHHHHHHhCc
Confidence 88888665444
No 180
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=98.91 E-value=2.2e-07 Score=86.88 Aligned_cols=135 Identities=12% Similarity=0.094 Sum_probs=87.4
Q ss_pred hHHHhHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhcchHHHHHHHHHHHHHHHHHHHhhccccCCC
Q 045564 66 LGEGWVANLMVYMIQEFHITSINSALISNIVNGFVNLFPVLGAIIADSFLGSFQVIWISSFISLLGTILLDSTATFDSLR 145 (296)
Q Consensus 66 ~~y~~~~~l~~yl~~~lg~s~~~a~~i~~~~~~~~~~~~l~~G~laDr~iGR~~~i~i~~~l~~ig~~~la~~~~~p~~~ 145 (296)
..+....+.+.++.+.+|.+..+++.+.....++..++.+++|+++|| +|||+++.++.++..+..+.+......+
T Consensus 209 ~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r-~g~~~~~~~~~~~~~~~~~~~~~~~~~~--- 284 (377)
T PRK11102 209 GMFSFLTAGPFVYIELNGVSPQNFGYYFALNIVFLFVMTIINSRFVRR-VGALNMLRFGLWIQFIMGIWLVVSALLD--- 284 (377)
T ss_pred HHHHHHHcCHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCHHHHHHHHHHHHHHHHHHHHHHHHHh---
Confidence 455555666778888899999999999999999999999999999999 7999999988776544333222221000
Q ss_pred CCccCCCCcCcCCCCchhhHHHHHHHHHHHHhhchhhhhhhhhhhccCCCccchhhHHHHHHHH-HHHHHHHHHHHHH
Q 045564 146 PQRCDIGLSLCKAPSKVQFAVLYSGIALACLGLGGLRFTLATMGANQFEIPQHQGIFFNWFFIL-TYASTVISSAAFV 222 (296)
Q Consensus 146 ~~~c~~~~~~~~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~~~ad~f~~~~~r~~~f~~~y~~-~~iG~~i~p~v~~ 222 (296)
.+...+.++..+.+.+.+...+.......|..| +.+++..+.+... ..+|+.+++++.+
T Consensus 285 ----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~g~~~~~~~~~~~~~g~~~g~~~~~ 344 (377)
T PRK11102 285 ----------------LGFWALVVGVAAFVGCVSMISSNAMAVILDEFP--HMAGTASSLAGTLRFGIGAIVGALLSL 344 (377)
T ss_pred ----------------hhHHHHHHHHHHHHHHHHHhhHHHHHHHhcccc--ccchHHHHHHHHHHHHHHHHHHHHHHh
Confidence 112233333334444445555555566777776 2567777664333 3356666665543
No 181
>TIGR00901 2A0125 AmpG-related permease.
Probab=98.90 E-value=5.1e-08 Score=90.72 Aligned_cols=132 Identities=11% Similarity=0.041 Sum_probs=96.8
Q ss_pred H-hHHHhHHHHHHHHHHHhCCChhHHHHHHHHHH-HHHHHHHHHHHHHhhhhcchHHHHHHHHHHHHHHHHHHHhhcccc
Q 045564 65 T-LGEGWVANLMVYMIQEFHITSINSALISNIVN-GFVNLFPVLGAIIADSFLGSFQVIWISSFISLLGTILLDSTATFD 142 (296)
Q Consensus 65 ~-~~y~~~~~l~~yl~~~lg~s~~~a~~i~~~~~-~~~~~~~l~~G~laDr~iGR~~~i~i~~~l~~ig~~~la~~~~~p 142 (296)
. .+++..+.++.|+.+ +|++..+.+.+..+.. ....++.+++|+++|| +|||+.+.++.++..++..+..+.. +
T Consensus 222 ~~~~~~~~~~~~~~l~~-~g~~~~~~g~~~~~~~~~~~~~g~~~~g~l~~r-~g~~~~l~~~~~~~~~~~~~~~~~~--~ 297 (356)
T TIGR00901 222 KLGDSAATVLTTLFLLD-MGFSKEEIALVAKINGLLGAILGGLIGGIIMQP-LNILYALLLFGIVQALTNAGFVWLA--S 297 (356)
T ss_pred HHHHHHHHHHHHHHHHH-cCCCHHHHHHHhHHHHHHHHHHHHHHHHHHHhh-hhHHHHHHHHHHHHHHHHHHHHHHH--h
Confidence 5 777778889999987 9999999888777655 5678999999999999 7999999888887776655443321 0
Q ss_pred CCCCCccCCCCcCcCCCCchhhHHHHHHHHHHHHhhchhhhhhhhhhhccCCCccchhhHHHHHHHHHH
Q 045564 143 SLRPQRCDIGLSLCKAPSKVQFAVLYSGIALACLGLGGLRFTLATMGANQFEIPQHQGIFFNWFFILTY 211 (296)
Q Consensus 143 ~~~~~~c~~~~~~~~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~~~ad~f~~~~~r~~~f~~~y~~~~ 211 (296)
.... ++ .. ..+...+....++.+++.+...+...+++.|.+|++ .|++.+++++...|
T Consensus 298 ~~~~------~~--~~--~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~-~~g~~~g~~~~~~~ 355 (356)
T TIGR00901 298 NGHH------DG--IT--FPHLLMLFLTITLEAVTGGLGTVAFVAFLSKLSNPK-FGATQMALLSSLSA 355 (356)
T ss_pred cCcc------cc--cc--cchHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCC-ccHHHHHHHHHHHh
Confidence 0000 00 00 012345566677888999999999999999999954 79999998776544
No 182
>TIGR00898 2A0119 cation transport protein.
Probab=98.90 E-value=9.2e-08 Score=93.42 Aligned_cols=130 Identities=12% Similarity=-0.012 Sum_probs=92.6
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhcchHHHHHHHHHHHHHHHHHHHhhccccCCCCCccCCCCcCcCCCCchhhHHHHHHHH
Q 045564 93 SNIVNGFVNLFPVLGAIIADSFLGSFQVIWISSFISLLGTILLDSTATFDSLRPQRCDIGLSLCKAPSKVQFAVLYSGIA 172 (296)
Q Consensus 93 ~~~~~~~~~~~~l~~G~laDr~iGR~~~i~i~~~l~~ig~~~la~~~~~p~~~~~~c~~~~~~~~~~~~~~~~~l~~~~~ 172 (296)
..+..+....+.+++++++|| +|||+.+.++.++..++.+++.+.. . .......+..+
T Consensus 361 ~~~~~~~~i~~~~~~~~l~dr-~grr~~~~~~~~~~~~~~l~~~~~~---~------------------~~~~~~~~~~~ 418 (505)
T TIGR00898 361 LFISGLVELPAKLITLLLIDR-LGRRYTMAASLLLAGVALLLLLFVP---V------------------DLYFLRTALAV 418 (505)
T ss_pred HHHHHHHHHHHHHHHHHHHHH-hCCHHHHHHHHHHHHHHHHHHHHcC---C------------------CchHHHHHHHH
Confidence 334556677788899999999 7999999998888777665554321 1 01122333344
Q ss_pred HHHHhhchhhhhhhhhhhccCCCccchhhHHHHHHHHHHHHHHHHHHHHHhhhccccchhhHHHHHHHHHHHHHH
Q 045564 173 LACLGLGGLRFTLATMGANQFEIPQHQGIFFNWFFILTYASTVISSAAFVYIEDNLSWRLGSGLNIAANLAGVVI 247 (296)
Q Consensus 173 l~gig~g~~~~~~~~~~ad~f~~~~~r~~~f~~~y~~~~iG~~i~p~v~~~l~~~~gw~~~F~i~~~~~~~~~~~ 247 (296)
+.+++.++..+....+.+|.+|++ .|+++.++.+....+|+.++|.+.+ +. ..++..++.+.++..+++.++
T Consensus 419 ~~~~~~~~~~~~~~~~~~e~~p~~-~r~~~~g~~~~~~~ig~~i~p~i~~-~~-~~~~~~~~~~~~~~~~~~~~~ 490 (505)
T TIGR00898 419 LGKFGITSAFQMVYLYTAELYPTV-VRNLGVGVCSTMARVGSIISPFLVY-LG-EKWLFLPLVLFGGLALLAGIL 490 (505)
T ss_pred HHHHHHHHHHHHHHHHhcccccHH-HHhhhHhHHHHHHHHHHHHHhHHHH-HH-HHHHhhHHHHHHHHHHHHHHH
Confidence 555666667788889999999954 7899999999999999999999988 44 346667777766655554443
No 183
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=98.90 E-value=1.5e-07 Score=88.97 Aligned_cols=170 Identities=13% Similarity=-0.056 Sum_probs=104.6
Q ss_pred HHHHHHHH-H-hHHH-hHHHHHHHHHHHhCCChhHHHHH--HHHHHHHHHHHHHHH-HHHhhhhcchHHHHHHHHHHH-H
Q 045564 57 LSRTVTCL-T-LGEG-WVANLMVYMIQEFHITSINSALI--SNIVNGFVNLFPVLG-AIIADSFLGSFQVIWISSFIS-L 129 (296)
Q Consensus 57 ~~l~~~~~-~-~~y~-~~~~l~~yl~~~lg~s~~~a~~i--~~~~~~~~~~~~l~~-G~laDr~iGR~~~i~i~~~l~-~ 129 (296)
..+....+ . .-++ ....++.|+ ++.|+|.++.+.. ..+......+.+++. ++.+|| +||||..++...+. .
T Consensus 4 ~~~~~ly~~~g~~~~~~~p~lp~~l-~~~g~~~~~iGl~~~~~l~~~~~~l~~p~~~~~~~~~-~g~r~~~i~~~~~~~~ 81 (390)
T TIGR02718 4 ITLGLLYLSQGIPIGLAMDALPTLL-REDGAPLTALAFLPLVGLPWVVKFLWAPLVDNWWSWR-LGRRRSWVLPMQCLVS 81 (390)
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHHH-HHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcccccc-CCcchhHHHHHHHHHH
Confidence 34444555 3 4444 445666666 4669999999886 344455555555555 668999 79999976665332 2
Q ss_pred HHHHHHHhhccccCCCCCccCCCCcCcCCCCchhhHHHHHHHHHHHHhhchhhhhhhhhhhccCCCccchhhHHHHHHHH
Q 045564 130 LGTILLDSTATFDSLRPQRCDIGLSLCKAPSKVQFAVLYSGIALACLGLGGLRFTLATMGANQFEIPQHQGIFFNWFFIL 209 (296)
Q Consensus 130 ig~~~la~~~~~p~~~~~~c~~~~~~~~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~~~ad~f~~~~~r~~~f~~~y~~ 209 (296)
+....++.. .+. ......++....+.++..+...+...++..|..+++ +++...+....+
T Consensus 82 ~~~~~~~~~--~~~-----------------~~~~~~~~~~~~~~~~~~a~~d~~~d~~~~~~~~~~-~~~~~~~~~~~g 141 (390)
T TIGR02718 82 ACLASLALV--GPD-----------------VAGAGWAVGLLACASLASATQDIATDGMAAEHFNGR-TLAKGNAVQIAG 141 (390)
T ss_pred HHHHHHHcC--Ccc-----------------hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHh-hhhHHHHHHHHH
Confidence 112222211 111 011122333344455666667777777777776533 445555556667
Q ss_pred HHHHHHHHHHHHHhhhccccchhhHHHHHHHHHHHHHHH
Q 045564 210 TYASTVISSAAFVYIEDNLSWRLGSGLNIAANLAGVVIF 248 (296)
Q Consensus 210 ~~iG~~i~p~v~~~l~~~~gw~~~F~i~~~~~~~~~~~~ 248 (296)
..+|..+|+.+.+++.+.+|||..|++.++..++..+..
T Consensus 142 ~~lG~~~g~~~~~~l~~~~gw~~~f~~~a~l~~~~~~~~ 180 (390)
T TIGR02718 142 VMIGFFGGGAGTLVLFGKFGQRPAFLLVACVPLASLVCV 180 (390)
T ss_pred HHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHH
Confidence 788999999888899999999999999888766555443
No 184
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.90 E-value=2e-07 Score=90.91 Aligned_cols=198 Identities=13% Similarity=0.028 Sum_probs=126.2
Q ss_pred CCchhHHHHHHHHH---H-hHHHhHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhcchHHHHHHHHH
Q 045564 51 GGRTALLSRTVTCL---T-LGEGWVANLMVYMIQEFHITSINSALISNIVNGFVNLFPVLGAIIADSFLGSFQVIWISSF 126 (296)
Q Consensus 51 ~~~~~~~~l~~~~~---~-~~y~~~~~l~~yl~~~lg~s~~~a~~i~~~~~~~~~~~~l~~G~laDr~iGR~~~i~i~~~ 126 (296)
.+++.+...+.+.+ . +.+.+ .+..+.+-++-|++..++.++......+..++.+++.++-|| +|||+.++++..
T Consensus 266 ~lR~~~~i~~~v~~~qq~sGi~ai-~~Yst~i~~~aG~~~~~a~~an~~~g~v~~~~t~~~~~lid~-~gRRpLll~~~~ 343 (485)
T KOG0569|consen 266 TLRRPLLIGIVVSFAQQFSGINAI-FFYSTSIFKTAGFTPEEAQYANLGIGIVNLLSTLVSPFLIDR-LGRRPLLLISLS 343 (485)
T ss_pred chhHHHHHHHHHHHHHHhcCccee-HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cCCcHHHHHHHH
Confidence 34555544444444 2 33323 233445556789999999999999999999999999999999 799999999999
Q ss_pred HHHHHHHHHHhhccccCCCCCccCCCCcCcCCCCchhhHHHHHHHHHHHHhhc-hhhhhhhhhhhccCCCccchhhHHHH
Q 045564 127 ISLLGTILLDSTATFDSLRPQRCDIGLSLCKAPSKVQFAVLYSGIALACLGLG-GLRFTLATMGANQFEIPQHQGIFFNW 205 (296)
Q Consensus 127 l~~ig~~~la~~~~~p~~~~~~c~~~~~~~~~~~~~~~~~l~~~~~l~gig~g-~~~~~~~~~~ad~f~~~~~r~~~f~~ 205 (296)
+..+..+++..+.++... ...+-....+++.++..++.+ +..|...-+.+|+||+ ..|..++++
T Consensus 344 ~~~~~~~~~~~~~~l~~~--------------~~~~~~y~~i~~~~~~~~~f~~G~gpi~~fi~aELf~~-~~R~aa~s~ 408 (485)
T KOG0569|consen 344 LMAVALLLMSIALFLSNS--------------FGSWLSYLCIAAIFLFIISFAIGPGPIPWFIGAELFPQ-SARSAAQSV 408 (485)
T ss_pred HHHHHHHHHHHHHHHHHH--------------hhhHHHHHHHHHHHHHHHhhhcCCCchhHHHHHHhCCc-cchHHHHHH
Confidence 988888887766432110 000000112333344333333 3567778889999994 468888888
Q ss_pred HHHHHHHHHHHHHHHHHhhhccccchhhHHHHHHHHHHHHHH---HHhCCC-chhHHHHHHHhcC
Q 045564 206 FFILTYASTVISSAAFVYIEDNLSWRLGSGLNIAANLAGVVI---FLSGKH-FYFPVIVASVKKW 266 (296)
Q Consensus 206 ~y~~~~iG~~i~p~v~~~l~~~~gw~~~F~i~~~~~~~~~~~---~~~~~~-~~~~v~~~~~~~~ 266 (296)
-+....+..++-...-..+.+..|- +.|.+.++..++..+. +++++| |....+....+|+
T Consensus 409 ~~~~~w~~~fiv~~~fp~l~~~~g~-~~filF~i~~~~~~i~~~~~lPETkgr~~~eI~~~~~~~ 472 (485)
T KOG0569|consen 409 ATAVNWLSNFIVGFAFPPLQNVIGP-YVFILFVIPLAIFLIYLYRYLPETKGRTPYEIIEELEKR 472 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcc-hhhHHHHHHHHHHHHHHHHhCcccCCCCHHHHHHHHHhC
Confidence 6666666666666666666666653 4455544444333333 345555 5556666666666
No 185
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=98.87 E-value=2.1e-07 Score=88.09 Aligned_cols=160 Identities=11% Similarity=-0.107 Sum_probs=100.3
Q ss_pred HHHHHHHH--H-hHHHhHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhcchH---HHHHH-HHHHHH
Q 045564 57 LSRTVTCL--T-LGEGWVANLMVYMIQEFHITSINSALISNIVNGFVNLFPVLGAIIADSFLGSF---QVIWI-SSFISL 129 (296)
Q Consensus 57 ~~l~~~~~--~-~~y~~~~~l~~yl~~~lg~s~~~a~~i~~~~~~~~~~~~l~~G~laDr~iGR~---~~i~i-~~~l~~ 129 (296)
+.+....+ . .+|++.+++|+|+++ .|++.. ++....+...... +..++++|| +.|| +.... ..++..
T Consensus 195 ~~~~~~~~~~~~~~~~~~~wlp~~L~~-~g~s~~-~~~~~~l~~~~g~---~g~~~~~d~-~~r~~~r~~~~~~~~~~~a 268 (368)
T TIGR00903 195 WIIGAILGFGVALFDNLAIWLEAALRP-AGLEDI-AGDAVALAILAGL---IGVAVIPDR-VARAGLRSIYIRAAALLIA 268 (368)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH-CCCChH-HHHHHHHHHHHHH---HHHHHhhHH-hhhhhhHHHHHHHHHHHHH
Confidence 44434444 5 888889999999964 678764 4444444444333 445888888 5543 33222 233322
Q ss_pred HHHHHHHhhccccCCCCCccCCCCcCcCCCCchhhHHHHHHHHHHHHhhchhhhhhhhhhhccCCCccchhhHHHHHHHH
Q 045564 130 LGTILLDSTATFDSLRPQRCDIGLSLCKAPSKVQFAVLYSGIALACLGLGGLRFTLATMGANQFEIPQHQGIFFNWFFIL 209 (296)
Q Consensus 130 ig~~~la~~~~~p~~~~~~c~~~~~~~~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~~~ad~f~~~~~r~~~f~~~y~~ 209 (296)
++...+.... +....++...+.+++.....+...++.+|.+|++ .|+++.++.+..
T Consensus 269 ~~~~~~~~~~-----------------------~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~-~rgt~~G~~~~~ 324 (368)
T TIGR00903 269 AFFLALAFEL-----------------------NRLALFAFIGIAGLLMLPAYAIIMDWIGKFCDKE-LHGKAAGAIGFT 324 (368)
T ss_pred HHHHHHHHcc-----------------------ccHHHHHHHHHHHHhhhhhHHHHHHHHHHhcchh-hcCcccchhhHH
Confidence 2222221110 1112233344555666666677889999999954 799999999999
Q ss_pred HHHHHHHHHHHHHhhhccccchhhHHHHHHHHHHHHHHH
Q 045564 210 TYASTVISSAAFVYIEDNLSWRLGSGLNIAANLAGVVIF 248 (296)
Q Consensus 210 ~~iG~~i~p~v~~~l~~~~gw~~~F~i~~~~~~~~~~~~ 248 (296)
.++|+..+|.+.+.+.. |.+..|.+.++..+++.+..
T Consensus 325 g~~~~~~~~~~~~~~~~--~~~~~f~~~~~~~~i~~~~~ 361 (368)
T TIGR00903 325 SRAISVALALAAMLFIS--SAEAYFTFLAILITIAFAIA 361 (368)
T ss_pred HHHHHHHHHHHHHHHhc--CHHHHHHHHHHHHHHHHHHH
Confidence 99999999999888774 66677777776665555544
No 186
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=98.86 E-value=2.9e-07 Score=85.94 Aligned_cols=182 Identities=15% Similarity=0.112 Sum_probs=129.7
Q ss_pred cCCchhHHHHHHHHH-H-hHHHhHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhcchHHHHHHHHHH
Q 045564 50 RGGRTALLSRTVTCL-T-LGEGWVANLMVYMIQEFHITSINSALISNIVNGFVNLFPVLGAIIADSFLGSFQVIWISSFI 127 (296)
Q Consensus 50 ~~~~~~~~~l~~~~~-~-~~y~~~~~l~~yl~~~lg~s~~~a~~i~~~~~~~~~~~~l~~G~laDr~iGR~~~i~i~~~l 127 (296)
++.+.+..+.+..-+ + .+|.+..++|.++. +.|+|..+++.+++..........+.+-.+++|.--+|+..+.....
T Consensus 205 w~~~~aW~vtLfmGlqS~~~Y~~~~WLP~ili-~~G~sa~~aG~llsl~~l~~~~~~ll~P~la~R~~n~r~~~~~~~~~ 283 (395)
T COG2807 205 WRSPLAWQVTLFMGLQSLLYYIVIGWLPAILI-DRGLSAAEAGSLLSLMQLAQLPTALLIPLLARRSKNQRPLVVLALLL 283 (395)
T ss_pred ccCchhHHHHHHHHhhHHHHHHHHHHHHHHHH-HcCCCHHHhhhHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHH
Confidence 444455555555555 7 99999999999986 67999999999999999999999999999999855688888888888
Q ss_pred HHHHHHHHHhhccccCCCCCccCCCCcCcCCCCchhhHHHHHHHHHHHHhhchhhhhhhhhhhccCCCccchhhHHHHHH
Q 045564 128 SLLGTILLDSTATFDSLRPQRCDIGLSLCKAPSKVQFAVLYSGIALACLGLGGLRFTLATMGANQFEIPQHQGIFFNWFF 207 (296)
Q Consensus 128 ~~ig~~~la~~~~~p~~~~~~c~~~~~~~~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~~~ad~f~~~~~r~~~f~~~y 207 (296)
..+|.+.+.+.+ . +...+. .+++|+|.|+..+..-.++.+-.++.++-.+.-+.-.
T Consensus 284 ~l~G~~G~~~~P---~-------------------~~~~lw--~~llG~G~G~~F~laL~li~~rs~~a~~Aa~LSgmaQ 339 (395)
T COG2807 284 MLVGLVGLLLAP---G-------------------QLPILW--ALLLGLGQGGAFPLALTLILLRSSDAAIAAALSGMAQ 339 (395)
T ss_pred HHHHHHHHHHhh---h-------------------hHHHHH--HHHHhCccchHHHHHHHHHHhhcCChHHHHHHHHHhh
Confidence 888888776542 1 222222 4789999999999999999998874434344443323
Q ss_pred HHHHHHHHHHHHHHHhhhccc-cchhhHHHHHHHHHHHHHH-HHhCCCchh
Q 045564 208 ILTYASTVISSAAFVYIEDNL-SWRLGSGLNIAANLAGVVI-FLSGKHFYF 256 (296)
Q Consensus 208 ~~~~iG~~i~p~v~~~l~~~~-gw~~~F~i~~~~~~~~~~~-~~~~~~~~~ 256 (296)
-..++=+.+||.+.|++-|.. +|+......+.+.++..+. +...+.+|.
T Consensus 340 g~GYllAa~GP~l~G~lhDa~gsw~~~~~~l~~~~i~m~i~Gl~a~r~~~i 390 (395)
T COG2807 340 GVGYLLAAFGPWLFGFLHDATGSWSAPLVLLALATLLMLIFGLRAGRNRYI 390 (395)
T ss_pred hhhHHHHhhhhhhHhHHHHhcCChHHHHHHHHHHHHHHHHHHhhcchhHHh
Confidence 333444677999999998876 5776655544433332222 334444553
No 187
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=98.86 E-value=2.5e-07 Score=88.07 Aligned_cols=153 Identities=9% Similarity=-0.034 Sum_probs=110.0
Q ss_pred HHhHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhcchHHHHHHHHHHHHHHHHHHHhhccccCCCCC
Q 045564 68 EGWVANLMVYMIQEFHITSINSALISNIVNGFVNLFPVLGAIIADSFLGSFQVIWISSFISLLGTILLDSTATFDSLRPQ 147 (296)
Q Consensus 68 y~~~~~l~~yl~~~lg~s~~~a~~i~~~~~~~~~~~~l~~G~laDr~iGR~~~i~i~~~l~~ig~~~la~~~~~p~~~~~ 147 (296)
......++.|+.+.+|.+..+.+.+.....++..++.++.+++.|| .++++.+..+..+ .+..+.+...
T Consensus 222 ~~~~~~~~~~~~~~lg~s~~~~G~~~~~~~~g~i~g~~~~~~l~~~-~~~~~~~~~g~~~-~~~~~~~~~~--------- 290 (393)
T PRK11195 222 ATLRFLVLAWAPVALGITLNQPAYLQAVVAIGIAVGAGAAARLVTL-ETVLRVLPAGILM-GLVVLLMALQ--------- 290 (393)
T ss_pred HHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhcC-CcccchHHHHHHH-HHHHHHHHHH---------
Confidence 3344455678888899999999999999999999999999999999 7999888777533 2222222211
Q ss_pred ccCCCCcCcCCCCchhhHHHHHHHHHHHHhhchhhhhhhhhhhccCCCccchhhHHHHHHHHHHHHHHHHHHHHHhhhcc
Q 045564 148 RCDIGLSLCKAPSKVQFAVLYSGIALACLGLGGLRFTLATMGANQFEIPQHQGIFFNWFFILTYASTVISSAAFVYIEDN 227 (296)
Q Consensus 148 ~c~~~~~~~~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~~~ad~f~~~~~r~~~f~~~y~~~~iG~~i~p~v~~~l~~~ 227 (296)
.+.+...+..++.|++.+...++..+.+.+.-|++..+++.++..++..++|..++..+.+.+ +.
T Consensus 291 --------------~~~~~~~~~~~~~G~~~g~~~~~~~~~~q~~~~~~~~~g~~~a~~~~~~~~~~~~~~~~~~~~-~~ 355 (393)
T PRK11195 291 --------------HSLLPAYPLLILIGALGGFFVVPMNALLQHRGHVLVGAGHSIAVQNFNENLAMLLMLGLYSLL-VK 355 (393)
T ss_pred --------------hHHHHHHHHHHHHHHhhhhhhhhHHHHHHhhCcccccchhHHHHHhHHHHHHHHHHHHHHHHH-HH
Confidence 122334455667888888877778888777655433378899999999999999999888865 45
Q ss_pred ccchhhHHHHHHHHHHHHH
Q 045564 228 LSWRLGSGLNIAANLAGVV 246 (296)
Q Consensus 228 ~gw~~~F~i~~~~~~~~~~ 246 (296)
+|-+..+.+.....++.+.
T Consensus 356 ~~~~~~~~~~~~~~~~~~~ 374 (393)
T PRK11195 356 LGVPVVAVIVGFGLLVALA 374 (393)
T ss_pred cCCCHHHHHHHHHHHHHHH
Confidence 6767777765554444443
No 188
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=98.85 E-value=8.7e-08 Score=94.54 Aligned_cols=170 Identities=11% Similarity=0.059 Sum_probs=129.1
Q ss_pred HHHHHHHH-H-hHHHhHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhcchHH--HHHHHHHHHHHHH
Q 045564 57 LSRTVTCL-T-LGEGWVANLMVYMIQEFHITSINSALISNIVNGFVNLFPVLGAIIADSFLGSFQ--VIWISSFISLLGT 132 (296)
Q Consensus 57 ~~l~~~~~-~-~~y~~~~~l~~yl~~~lg~s~~~a~~i~~~~~~~~~~~~l~~G~laDr~iGR~~--~i~i~~~l~~ig~ 132 (296)
.+.+...+ . +++....+++.|.. ..|+++.+++.++++..+...++-++.|+++|+ ...++ ...++.++..+..
T Consensus 302 ~~~~~~~~~~~g~~~p~~~l~~~~~-~~g~~~~~aa~l~Siigi~~i~gRi~~G~laD~-~~~~~~~~~~~~ll~~gl~~ 379 (509)
T KOG2504|consen 302 LLALSNLFAYLGFNVPFVYLPSYAK-SLGLSSNDAAFLLSIIGVSDIIGRIILGLLADK-PGIRALVLFLLTLLIAGLAR 379 (509)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHh-hcCCChhhhHHHHHHHHHhhhhhhhhhhhhcCc-cccchHHHHHHHHHHHHHHH
Confidence 33333444 4 66666677888876 899999999999999999999999999999999 56333 3333334333333
Q ss_pred HHHHhhccccCCCCCccCCCCcCcCCCCchhhHHHHHHHHHHHHhhchhhhhhhhhhhccCCCccchhhHHHHHHHHHHH
Q 045564 133 ILLDSTATFDSLRPQRCDIGLSLCKAPSKVQFAVLYSGIALACLGLGGLRFTLATMGANQFEIPQHQGIFFNWFFILTYA 212 (296)
Q Consensus 133 ~~la~~~~~p~~~~~~c~~~~~~~~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~~~ad~f~~~~~r~~~f~~~y~~~~i 212 (296)
+.+.+. .+...+...-++.|+..|...+..+..+.|+.+.+ +...++++..+...+
T Consensus 380 ~~~p~~-----------------------~~~~~l~~~~~~fG~~~g~~~~l~~~i~~~~~g~~-~l~~a~Gl~l~~~gi 435 (509)
T KOG2504|consen 380 LFLPFA-----------------------TTYVGLIVFSILFGFCVGSFSSLTPVILVDLVGLE-KLSNAYGLLLLFQGI 435 (509)
T ss_pred HHHHHh-----------------------ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChh-hcchHHHHHHHHhHH
Confidence 222211 13456777778889999988888888999999844 578899999999999
Q ss_pred HHHHHHHHHHhhhcccc-chhhHHHHHHHHHHHHHHHHhCC
Q 045564 213 STVISSAAFVYIEDNLS-WRLGSGLNIAANLAGVVIFLSGK 252 (296)
Q Consensus 213 G~~i~p~v~~~l~~~~g-w~~~F~i~~~~~~~~~~~~~~~~ 252 (296)
++++||.++|++.|..| |...|+.+.+.++++.+.+++.+
T Consensus 436 ~~l~gpPiag~~~d~tg~Y~~~f~~~g~~~~~s~~~~~~~~ 476 (509)
T KOG2504|consen 436 GALVGPPIAGLLYDITGNYDHAFYFCGLCFLLSAVLLLILR 476 (509)
T ss_pred HHHcCcccceeeeeccCCeeeehhhcChHHHHHHHHHHHhH
Confidence 99999999999998877 99999999998888776665544
No 189
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=98.84 E-value=5.6e-08 Score=89.12 Aligned_cols=131 Identities=16% Similarity=0.164 Sum_probs=106.6
Q ss_pred hHHHhHHHHHHHHHHHhCCC-hhHHHHHHHHHHHHHHHHHHHHHHHhhhhcchHHHHHHHHHHHHHHHHHHHhhccccCC
Q 045564 66 LGEGWVANLMVYMIQEFHIT-SINSALISNIVNGFVNLFPVLGAIIADSFLGSFQVIWISSFISLLGTILLDSTATFDSL 144 (296)
Q Consensus 66 ~~y~~~~~l~~yl~~~lg~s-~~~a~~i~~~~~~~~~~~~l~~G~laDr~iGR~~~i~i~~~l~~ig~~~la~~~~~p~~ 144 (296)
.++....+++.|+.+.+|.+ ..+.+.+..+..+...++.++.|+++|| +|+++.+.+......++.+.+.+....
T Consensus 221 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 296 (352)
T PF07690_consen 221 VFSGFSFFLPLYLQEVLGFSGPSQAGLLFSIFGIVGIIGSLLAGRLSDR-FGRRRRLLIAILLLILGALGLLLLPFS--- 296 (352)
T ss_dssp HHHHHHHHHHHHCCHHHHCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHHHCCSHHH---
T ss_pred HHHHhhcccchhhhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCcHHHHHHHHHHHHHHHHHHHHHHHh---
Confidence 55557788888989999999 7899999999999999999999999999 799888888777776665554433210
Q ss_pred CCCccCCCCcCcCCCCchhhHHHHHHHHHHHHhhchhhhhhhhhhhccCCCccchhhHHHHHHHHHHHHHHHHH
Q 045564 145 RPQRCDIGLSLCKAPSKVQFAVLYSGIALACLGLGGLRFTLATMGANQFEIPQHQGIFFNWFFILTYASTVISS 218 (296)
Q Consensus 145 ~~~~c~~~~~~~~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~~~ad~f~~~~~r~~~f~~~y~~~~iG~~i~p 218 (296)
.+....++..++.|++.+...+...++..|.+|+ +.|++..++++...++|+.+||
T Consensus 297 -----------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~~~~igP 352 (352)
T PF07690_consen 297 -----------------SSPVWLIIALFLIGFGFGIVFPILFSLIQELVPP-EYRGTAFGLFNSIGSLGGIIGP 352 (352)
T ss_dssp -----------------CHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCHT-CHHHHHHHHHHHHHHHHHHHHH
T ss_pred -----------------hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCH-HHHHHHHHHHHHHHHHHHHHCC
Confidence 1234555567788999999999999999999984 4789999999999999999987
No 190
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=98.83 E-value=3.6e-07 Score=86.26 Aligned_cols=68 Identities=13% Similarity=0.152 Sum_probs=57.1
Q ss_pred hHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhcchHHHHHHHHHHHHHHHHHHHhh
Q 045564 70 WVANLMVYMIQEFHITSINSALISNIVNGFVNLFPVLGAIIADSFLGSFQVIWISSFISLLGTILLDST 138 (296)
Q Consensus 70 ~~~~l~~yl~~~lg~s~~~a~~i~~~~~~~~~~~~l~~G~laDr~iGR~~~i~i~~~l~~ig~~~la~~ 138 (296)
.....+.|+.+++|++..+.+.......+...++.++.|++.|| +|||+.+.++.++..++.+.+.+.
T Consensus 222 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~l~~r-~g~~~~~~~~~~~~~~~~~~~~~~ 289 (392)
T PRK10473 222 FVNTSPVLLMEQMGFSRGEYAIIMALTAGVSMTVSFSTPFALGI-FKPRTLMLTSQVLFLAAGITLALS 289 (392)
T ss_pred HHHhCHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cCHHHHHHHHHHHHHHHHHHHHHH
Confidence 33455667888899999999988888899999999999999999 799999999988888777666543
No 191
>PRK11462 putative transporter; Provisional
Probab=98.83 E-value=2.2e-07 Score=90.53 Aligned_cols=163 Identities=13% Similarity=0.126 Sum_probs=113.5
Q ss_pred hHHHhHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhh---hcchHHHHH-HHHHHHHHHHHHHHhhccc
Q 045564 66 LGEGWVANLMVYMIQEFHITSINSALISNIVNGFVNLFPVLGAIIADS---FLGSFQVIW-ISSFISLLGTILLDSTATF 141 (296)
Q Consensus 66 ~~y~~~~~l~~yl~~~lg~s~~~a~~i~~~~~~~~~~~~l~~G~laDr---~iGR~~~i~-i~~~l~~ig~~~la~~~~~ 141 (296)
.+..+..++..|.++.+|+++..++.+..+.-+.-.+.-|+.|+++|| .+||||..+ ++.+...++.+++...
T Consensus 24 ~~~~~~~~l~~fyt~~~Gl~~~~~g~i~~~~ri~Dai~Dp~~G~~~D~t~~r~Gr~rp~il~g~i~~~i~~~llf~~--- 100 (460)
T PRK11462 24 IFDNVMLYMMFFYTDIFGIPAGFVGTMFLVARALDAISDPCMGLLADRTRSRWGKFRPWVLFGALPFGIVCVLAYST--- 100 (460)
T ss_pred HHHHHHHHHHHHHHHhhCCCHHHHHHHHHHHHHHHHHHhhhheehhccCCCCCCCcchhHhHHHHHHHHHHHHHHhC---
Confidence 444456788999999999999999999999999999999999999997 269876654 5656776665544322
Q ss_pred cCCCCCccCCCCcCcCCCCchhhHHHHHHHHHHHHhhchhhhhhhhhhhccCCCccchhhHHHHHHHHHHHHHHHHHHHH
Q 045564 142 DSLRPQRCDIGLSLCKAPSKVQFAVLYSGIALACLGLGGLRFTLATMGANQFEIPQHQGIFFNWFFILTYASTVISSAAF 221 (296)
Q Consensus 142 p~~~~~~c~~~~~~~~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~~~ad~f~~~~~r~~~f~~~y~~~~iG~~i~p~v~ 221 (296)
|... ......-+++...+..++......+-.++.+|+.++.++|.+..++..+..++|..+++.+.
T Consensus 101 p~~s--------------~~~~~~y~~~~~~~~~~~~t~~~ipy~al~~~lt~d~~eRt~l~s~r~~~~~iG~~~~~~~~ 166 (460)
T PRK11462 101 PDLS--------------MNGKMIYAAITYTLLTLLYTVVNIPYCALGGVITNDPTQRISLQSWRFVLATAGGMLSTVLM 166 (460)
T ss_pred CCCC--------------cchHHHHHHHHHHHHHHHHHHHhccHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3210 01122334444455677777777788889999998777899999998888888887777665
Q ss_pred Hhhhcc-------ccchhhHHHHHHHHHHHH
Q 045564 222 VYIEDN-------LSWRLGSGLNIAANLAGV 245 (296)
Q Consensus 222 ~~l~~~-------~gw~~~F~i~~~~~~~~~ 245 (296)
..+.+. .||+....+.+++.++..
T Consensus 167 ~plv~~~g~~~~~~g~~~~~~i~~ii~~i~~ 197 (460)
T PRK11462 167 MPLVNLIGGDNKPLGFQGGIAVLSVVAFMML 197 (460)
T ss_pred HHHHHHhCCCchhhhHHHHHHHHHHHHHHHH
Confidence 444322 246655555544443333
No 192
>PRK11043 putative transporter; Provisional
Probab=98.82 E-value=8.9e-07 Score=83.83 Aligned_cols=142 Identities=8% Similarity=-0.056 Sum_probs=99.4
Q ss_pred hHHHhHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhcchHHHHHHHHHHHHHHHHHHHhhccccCCC
Q 045564 66 LGEGWVANLMVYMIQEFHITSINSALISNIVNGFVNLFPVLGAIIADSFLGSFQVIWISSFISLLGTILLDSTATFDSLR 145 (296)
Q Consensus 66 ~~y~~~~~l~~yl~~~lg~s~~~a~~i~~~~~~~~~~~~l~~G~laDr~iGR~~~i~i~~~l~~ig~~~la~~~~~p~~~ 145 (296)
.++....+++.|+. +.|++..+.+........+..++.++++++.|| +|||+.+....+...++.+.+.+....+.
T Consensus 218 ~~~~~~~~~p~~~~-~~g~s~~~~g~~~~~~~~~~~~g~~~~~~l~~r-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 293 (401)
T PRK11043 218 AFFAWLTGSPFILE-QMGYSPADIGLSYVPQTIAFLVGGYGCRAALQK-WGGEQLLPWLLVLFAVSVIAIWLASLLSH-- 293 (401)
T ss_pred HHHHHHHHhHHHHH-HcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCHHHHHHHHHHHHHHHHHHHHHHHHhcc--
Confidence 44555566777775 579999998887777778888899999999999 79999877666655554443332221100
Q ss_pred CCccCCCCcCcCCCCchhhHHHHHHHHHHHHhhchhhhhhhhhhhccCCCccchhhHHHHHHHHHHHHHHHHHHHHHhhh
Q 045564 146 PQRCDIGLSLCKAPSKVQFAVLYSGIALACLGLGGLRFTLATMGANQFEIPQHQGIFFNWFFILTYASTVISSAAFVYIE 225 (296)
Q Consensus 146 ~~~c~~~~~~~~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~~~ad~f~~~~~r~~~f~~~y~~~~iG~~i~p~v~~~l~ 225 (296)
.+....++...+.+++.+...+...+...+.+|+ .+++..++++.....++.+++.+.+.+.
T Consensus 294 ----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~g~~~g~~~~~~~~~~~~~~~~~g~l~ 355 (401)
T PRK11043 294 ----------------PSLVPLLIPFCVMAAANGAIYPIVVAQALRPFPQ--ATGKAAALQNTLQLGLCFLASLLVSALI 355 (401)
T ss_pred ----------------CcHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCcc--cChHHHHHHHHHHHHHHHHHHHHHHHcc
Confidence 1123344455667788888888887777787773 5788899888777778888888888887
Q ss_pred cccc
Q 045564 226 DNLS 229 (296)
Q Consensus 226 ~~~g 229 (296)
+...
T Consensus 356 ~~~~ 359 (401)
T PRK11043 356 STPL 359 (401)
T ss_pred CCCh
Confidence 6433
No 193
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=98.82 E-value=2.4e-07 Score=86.51 Aligned_cols=148 Identities=11% Similarity=0.060 Sum_probs=107.1
Q ss_pred HHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhcchHHHHHHHHHHHHHHHHHHHhhccccCCCCCccCCCCcCc
Q 045564 77 YMIQEFHITSINSALISNIVNGFVNLFPVLGAIIADSFLGSFQVIWISSFISLLGTILLDSTATFDSLRPQRCDIGLSLC 156 (296)
Q Consensus 77 yl~~~lg~s~~~a~~i~~~~~~~~~~~~l~~G~laDr~iGR~~~i~i~~~l~~ig~~~la~~~~~p~~~~~~c~~~~~~~ 156 (296)
.+.++.|++..+.+.+.....+...+..++.|.++|| +||||.-++.++++.+..+.-- .
T Consensus 59 ~LY~~yg~~~~qIa~Lf~~Gf~Ss~i~g~~~G~laD~-~Grk~~cl~~cily~~scl~k~----~--------------- 118 (354)
T PF05631_consen 59 ALYESYGFSEHQIAILFVAGFASSAIFGTFVGSLADR-YGRKKACLLFCILYSLSCLTKH----S--------------- 118 (354)
T ss_pred HHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cCchHHHHHHHHHHHHHHHHHh----c---------------
Confidence 3456899999999998888888999999999999999 7999999999999988654221 1
Q ss_pred CCCCchhhHHHHHHHHHHHHhhchhhhhhhhhhhccCCC----ccchhhHHHHHH-HHHHHHHHHHHHHHHhhhccccc-
Q 045564 157 KAPSKVQFAVLYSGIALACLGLGGLRFTLATMGANQFEI----PQHQGIFFNWFF-ILTYASTVISSAAFVYIEDNLSW- 230 (296)
Q Consensus 157 ~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~~~ad~f~~----~~~r~~~f~~~y-~~~~iG~~i~p~v~~~l~~~~gw- 230 (296)
.+...++++|++.|++......+--+.+.....+ ++....-|+... +.+.+-++++.+++.++.+..+.
T Consensus 119 -----~~~~~L~~GRvlgGiaTSLLfS~FEsW~V~Eh~~~g~~~~~L~~tF~~~tf~~n~~vAI~aGv~a~~l~~~~~~g 193 (354)
T PF05631_consen 119 -----SNYPVLLLGRVLGGIATSLLFSAFESWMVHEHNKRGFPQEWLSDTFSLATFFGNGVVAIGAGVVANVLADWFGFG 193 (354)
T ss_pred -----cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHhHHHHHHHhHHHHHHHHHhCCC
Confidence 1357899999999999998887666655433321 223333444332 23334456667777788776654
Q ss_pred -hhhHHHHHHHHHHHHHHHH
Q 045564 231 -RLGSGLNIAANLAGVVIFL 249 (296)
Q Consensus 231 -~~~F~i~~~~~~~~~~~~~ 249 (296)
..+|..++++.+++.++..
T Consensus 194 ~vaPF~~a~~~l~~~~~~I~ 213 (354)
T PF05631_consen 194 PVAPFDAAIVLLAVAAVLIL 213 (354)
T ss_pred CcchHHHHHHHHHHHHHHHH
Confidence 7889988887777666544
No 194
>PF13347 MFS_2: MFS/sugar transport protein
Probab=98.81 E-value=2.4e-08 Score=95.87 Aligned_cols=172 Identities=12% Similarity=0.053 Sum_probs=120.9
Q ss_pred HHHhHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhh----hhcchHHH-HHHHHHHHHHHHHHHHhhccc
Q 045564 67 GEGWVANLMVYMIQEFHITSINSALISNIVNGFVNLFPVLGAIIAD----SFLGSFQV-IWISSFISLLGTILLDSTATF 141 (296)
Q Consensus 67 ~y~~~~~l~~yl~~~lg~s~~~a~~i~~~~~~~~~~~~l~~G~laD----r~iGR~~~-i~i~~~l~~ig~~~la~~~~~ 141 (296)
......+++.|+++.+|+++..++.+..+.-+...+..|+.|.++| | +||||. ++++.++..++.+++..+ .
T Consensus 17 ~~~~~~~~~~f~~~~~gl~~~~~g~i~~~~~i~dai~dp~~G~~sDr~~tr-~Grrrp~~l~g~i~~~~~~~llf~~--~ 93 (428)
T PF13347_consen 17 WSLLSSYLLYFYTDVLGLSPALAGLILLVGRIWDAITDPLIGYLSDRTRTR-WGRRRPWILIGAILLALSFFLLFSP--P 93 (428)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHhhhhcCCcEEEEEeeeccc-ccccceEeehhhHHHHHHHHHhhcc--c
Confidence 3334568888999999999999999999999999999999999999 7 797765 556777777766655433 1
Q ss_pred cCCCCCccCCCCcCcCCCCchhhHHHHHHHHHHHHhhchhhhhhhhhhhccCCCccchhhHHHHHHHHHHHHHHHHHHHH
Q 045564 142 DSLRPQRCDIGLSLCKAPSKVQFAVLYSGIALACLGLGGLRFTLATMGANQFEIPQHQGIFFNWFFILTYASTVISSAAF 221 (296)
Q Consensus 142 p~~~~~~c~~~~~~~~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~~~ad~f~~~~~r~~~f~~~y~~~~iG~~i~p~v~ 221 (296)
|.-. +.......+++..++..++......+..++++|+.+++++|.+..++-.+...+|.++...+.
T Consensus 94 p~~~-------------~~~~~~~~~~~~~~l~~~~~t~~~i~~~al~~~lt~~~~~R~~l~~~~~~~~~~g~~l~~~~~ 160 (428)
T PF13347_consen 94 PAGL-------------SFTAKLVWLFVFYILFDIAYTFVQIPYNALIPELTPDPDERTRLSSWRMIFSMIGSLLASFLA 160 (428)
T ss_pred cchh-------------hhhhHHHHHHHHHHHHHHhhhhccCchhhcCccccccHhhhhhHHHHHHHHHHHHHHHHHHHh
Confidence 2100 001122334555666688888888889999999998666788888887777777776555544
Q ss_pred Hhhhc----c---ccchhhHHHHHHHHHHHHHHHHhCCCc
Q 045564 222 VYIED----N---LSWRLGSGLNIAANLAGVVIFLSGKHF 254 (296)
Q Consensus 222 ~~l~~----~---~gw~~~F~i~~~~~~~~~~~~~~~~~~ 254 (296)
+.+.+ . .+|++..++.+++.++..++.+...|.
T Consensus 161 ~~l~~~~g~~~~~~~~~~~~~v~~iv~~v~~~i~~~~~ke 200 (428)
T PF13347_consen 161 PILVSWFGGGDTSNGYRWMALVLAIVGLVFFLITFFFVKE 200 (428)
T ss_pred hhhhhhhccCccchHHHHHHHHHHHHHHHHhhhhhheeee
Confidence 44432 2 168888887777666655554444443
No 195
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.81 E-value=1.1e-07 Score=92.73 Aligned_cols=175 Identities=14% Similarity=0.131 Sum_probs=109.6
Q ss_pred HHHHHHHHH--H-hHHHhHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhcch----HHHHHHHHHHH
Q 045564 56 LLSRTVTCL--T-LGEGWVANLMVYMIQEFHITSINSALISNIVNGFVNLFPVLGAIIADSFLGS----FQVIWISSFIS 128 (296)
Q Consensus 56 ~~~l~~~~~--~-~~y~~~~~l~~yl~~~lg~s~~~a~~i~~~~~~~~~~~~l~~G~laDr~iGR----~~~i~i~~~l~ 128 (296)
++.++...+ . +++....++|+|+.+.||++..+.+...++-.+...+..+++|.++||..-| +.+..+...+.
T Consensus 260 vwai~~~~f~~~~~~~~l~~y~PtY~~~VL~f~v~~~G~~salP~l~~~~~k~~~g~lsD~l~~~~ls~t~~rkifn~i~ 339 (466)
T KOG2532|consen 260 VWAIWISAFGGNWGFYLLLTYLPTYLKEVLGFDVRETGFLSALPFLAMAIVKFVAGQLSDRLTFRILSETTVRKIFNTIA 339 (466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCchHhHHHHHHhHH
Confidence 355555555 6 8888999999999999999999999999999999999999999999995331 11122222211
Q ss_pred HHHH--HHHHhhccccCCCCCccCCCCcCcCCCCchhhHHHHHHHHHHHHhhchhhhhhhhhhhccCCCccchhhHHHHH
Q 045564 129 LLGT--ILLDSTATFDSLRPQRCDIGLSLCKAPSKVQFAVLYSGIALACLGLGGLRFTLATMGANQFEIPQHQGIFFNWF 206 (296)
Q Consensus 129 ~ig~--~~la~~~~~p~~~~~~c~~~~~~~~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~~~ad~f~~~~~r~~~f~~~ 206 (296)
..+. .++.+. +.+. + +.......+.++..+.|+..++.. .-..|.-| +.-+..+++.
T Consensus 340 ~~~~ai~l~~l~-~~~~------~--------~~~~a~~~l~~~~~~~g~~~~Gf~----~~~~~~ap--q~a~~l~g~~ 398 (466)
T KOG2532|consen 340 FGGPAVFLLVLA-FTSD------E--------HRLLAVILLTIAIGLSGFNISGFY----KNHQDIAP--QHAGFVMGII 398 (466)
T ss_pred HHHHHHHHHeee-ecCC------C--------cchHHHHHHHHHHHHcccchhhhH----hhhhhccc--hHHHHHHHHH
Confidence 1111 111111 1110 0 000111222222222222222211 11122122 3456777888
Q ss_pred HHHHHHHHHHHHHHHHhhhcc---ccchhhHHHHHHHHHHHHHHHHhC
Q 045564 207 FILTYASTVISSAAFVYIEDN---LSWRLGSGLNIAANLAGVVIFLSG 251 (296)
Q Consensus 207 y~~~~iG~~i~p~v~~~l~~~---~gw~~~F~i~~~~~~~~~~~~~~~ 251 (296)
+...++.++++|.+++.+.++ ..|++.|++.++++.++.++|.+.
T Consensus 399 ~~~~~~~~~~~P~~vg~~~~~~t~~eW~~VF~i~a~i~~~~~i~f~~f 446 (466)
T KOG2532|consen 399 NFVGALAGFIAPLLVGIIVTDNTREEWRIVFLIAAGILIVGNIIFLFF 446 (466)
T ss_pred HHHHHHHHHHHHHheeeEeCCCCHHHHHHHHHHHHHHHHHhchheeEe
Confidence 889999999999999999843 379999999999888887766443
No 196
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=98.79 E-value=4.2e-07 Score=87.18 Aligned_cols=150 Identities=9% Similarity=-0.074 Sum_probs=106.9
Q ss_pred hHHHhHHHHHHHHHHH-hCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhcchHHHHHHHHHHHHHHHHHHHhhccccCC
Q 045564 66 LGEGWVANLMVYMIQE-FHITSINSALISNIVNGFVNLFPVLGAIIADSFLGSFQVIWISSFISLLGTILLDSTATFDSL 144 (296)
Q Consensus 66 ~~y~~~~~l~~yl~~~-lg~s~~~a~~i~~~~~~~~~~~~l~~G~laDr~iGR~~~i~i~~~l~~ig~~~la~~~~~p~~ 144 (296)
...+..++++.|+.+. .+.+...++...+.+.+...++-+++|+++|| +++||++.++.++..+..++.....
T Consensus 247 ~e~~~~s~l~~y~~~~~~~~~~~~a~~~~~~~~~~~~vGR~~~~~l~~r-~~~~~~l~i~~~~~~~~~ll~~~~~----- 320 (410)
T TIGR00885 247 VQIMCWTFIIQYAVRLIPGMTAGFAANYNIGAMVIFFISRFIGTWLISY-LAAHKVLMAYAIIGMALCLGSIFAG----- 320 (410)
T ss_pred HHHHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCHHHHHHHHHHHHHHHHHHHHHcC-----
Confidence 4445667888888653 24555555666777778889999999999999 7999998888877776555444321
Q ss_pred CCCccCCCCcCcCCCCchhhHHHHHHHHHHHHhhchhhhhhhhhhhccCCCccchhhHHHHHHHHHHHHHHHHHHHHHhh
Q 045564 145 RPQRCDIGLSLCKAPSKVQFAVLYSGIALACLGLGGLRFTLATMGANQFEIPQHQGIFFNWFFILTYASTVISSAAFVYI 224 (296)
Q Consensus 145 ~~~~c~~~~~~~~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~~~ad~f~~~~~r~~~f~~~y~~~~iG~~i~p~v~~~l 224 (296)
+. ......++.+++.+.+.|.+.+...+..+++.. .+-....++ .+|+.+.|.+.|++
T Consensus 321 ------------------~~-~~~~~l~~~glf~s~~fp~i~sl~~~~~g~~~~--~~s~~l~~~-~~Gga~~p~l~G~~ 378 (410)
T TIGR00885 321 ------------------GH-VGLYCLTLCSAFMSLMFPTIYGIALKGLGQDTK--YGAAGLVMA-IIGGGIVPPLQGFI 378 (410)
T ss_pred ------------------Ch-HHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhh--hhHHHHHHH-HhccchHHHHHHHH
Confidence 11 224455677788888889999999999984432 222223333 38999999999999
Q ss_pred hccc------cchhhHHHHHHHHHH
Q 045564 225 EDNL------SWRLGSGLNIAANLA 243 (296)
Q Consensus 225 ~~~~------gw~~~F~i~~~~~~~ 243 (296)
.|.. +.+..|.++.++.+.
T Consensus 379 ~d~~~~~~~~~~~~~~~~~~~~~~~ 403 (410)
T TIGR00885 379 IDMKEIAAAPAVNTSFILPLLCFAV 403 (410)
T ss_pred HHHhcccccCccchHHHHHHHHHHH
Confidence 9954 478889988876654
No 197
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=98.69 E-value=5.7e-07 Score=84.26 Aligned_cols=104 Identities=10% Similarity=-0.014 Sum_probs=79.1
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhcchHHHHHHHHHHHHHHHHHHHhhccccCCCCCccCCCCcCcCCCCchhhHHHHHHHH
Q 045564 93 SNIVNGFVNLFPVLGAIIADSFLGSFQVIWISSFISLLGTILLDSTATFDSLRPQRCDIGLSLCKAPSKVQFAVLYSGIA 172 (296)
Q Consensus 93 ~~~~~~~~~~~~l~~G~laDr~iGR~~~i~i~~~l~~ig~~~la~~~~~p~~~~~~c~~~~~~~~~~~~~~~~~l~~~~~ 172 (296)
+.+....-+-|.++.+++-|| +|||+++.++.+++.+..+++..+- .++ .-...++.+|+
T Consensus 387 llitslaefPGlLIt~~iver-lGRKkTMal~l~~f~iflfll~~c~------------------~rn-~~tvllf~ara 446 (528)
T KOG0253|consen 387 LLITSLAEFPGLLITGVIVER-LGRKKTMALSLILFGIFLFLLTTCK------------------TRN-AYTVLLFTARA 446 (528)
T ss_pred HHHHHHhhCCchhHHHHHHHH-hcchhHHHHHHHHHHHHHHHHHHhc------------------Ccc-hhHHHHHHHHH
Confidence 445566778889999999999 8999999999999988766655442 111 11234566677
Q ss_pred HHHHhhchhhhhhhhhhhccCCCccchhhHHHHHHHHHHHHHHHHHHHH
Q 045564 173 LACLGLGGLRFTLATMGANQFEIPQHQGIFFNWFFILTYASTVISSAAF 221 (296)
Q Consensus 173 l~gig~g~~~~~~~~~~ad~f~~~~~r~~~f~~~y~~~~iG~~i~p~v~ 221 (296)
++..+ ..+.+.|..|.||+ ..|+.+.+...-+.-+|++++|+++
T Consensus 447 fisg~----fqvaYvYtPEVyPT-avRatgvGtcSsmaRIggI~~p~iA 490 (528)
T KOG0253|consen 447 FISGA----FQVAYVYTPEVYPT-AVRATGVGTCSSMARIGGIFSPVIA 490 (528)
T ss_pred HHhch----heEEEEecCcccch-hhhhcchhhhhhHHhhhhhhhhHHH
Confidence 66544 44578899999995 4789999988778889999999988
No 198
>PRK11462 putative transporter; Provisional
Probab=98.68 E-value=4.8e-06 Score=81.15 Aligned_cols=131 Identities=8% Similarity=-0.042 Sum_probs=81.2
Q ss_pred HHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhcchHHHHHHHHHHHHHHHHHHHhhccccCCCCCccCCCCcCc
Q 045564 77 YMIQEFHITSINSALISNIVNGFVNLFPVLGAIIADSFLGSFQVIWISSFISLLGTILLDSTATFDSLRPQRCDIGLSLC 156 (296)
Q Consensus 77 yl~~~lg~s~~~a~~i~~~~~~~~~~~~l~~G~laDr~iGR~~~i~i~~~l~~ig~~~la~~~~~p~~~~~~c~~~~~~~ 156 (296)
|.+..+|.+ ...+.+...+.++..++.+++++++|| +|+|+++..+..+..+..+++.+ .|.
T Consensus 254 ~~~y~~g~~-~~~~~~l~~~~i~~iig~~l~~~l~~r-~gkk~~~~~~~~~~~~~~~~~~~---~~~------------- 315 (460)
T PRK11462 254 YVTWILGTP-EVFVAFLTTYCVGNLIGSALAKPLTDW-KCKVTIFWWTNALLAVISLAMFF---VPM------------- 315 (460)
T ss_pred hhhhhcCCh-HHHHHHHHHHHHHHHHHHHHHHHHHHH-hChHHHHHHHHHHHHHHHHHHHH---hch-------------
Confidence 444345543 333456677778888899999999999 79998877655544332222221 111
Q ss_pred CCCCchhhHHHHHHHHHHHHhhchhhhhhhhhhhccCCC------ccchhhHHHHHHHHHHHHHHHHHHHHHhhhccccc
Q 045564 157 KAPSKVQFAVLYSGIALACLGLGGLRFTLATMGANQFEI------PQHQGIFFNWFFILTYASTVISSAAFVYIEDNLSW 230 (296)
Q Consensus 157 ~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~~~ad~f~~------~~~r~~~f~~~y~~~~iG~~i~p~v~~~l~~~~gw 230 (296)
.+...+++..++.+++.++..+...++++|..+. +++-+..++...++..+|..+|+.++|++.+..|+
T Consensus 316 -----~~~~~~~~~~~l~g~~~~~~~~l~~~m~ad~~d~~e~~tG~r~~g~~~a~~~f~~Klg~alg~~i~g~iL~~~Gy 390 (460)
T PRK11462 316 -----QASITMFVFIFVIGVLHQLVTPIQWVMMSDTVDYGEWCNGKRLTGISFAGTLFVLKLGLAFGGALIGWMLAYGGY 390 (460)
T ss_pred -----hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhHHhcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 1122333444556777777677777888887761 21224446767788888988888888777654444
No 199
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=98.68 E-value=2.4e-07 Score=90.05 Aligned_cols=188 Identities=13% Similarity=0.075 Sum_probs=124.1
Q ss_pred ccCCchhHHHHHHHHH--H-hHHHhHHHHHHHHHH-HhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhcch-HHHHHH
Q 045564 49 KRGGRTALLSRTVTCL--T-LGEGWVANLMVYMIQ-EFHITSINSALISNIVNGFVNLFPVLGAIIADSFLGS-FQVIWI 123 (296)
Q Consensus 49 ~~~~~~~~~~l~~~~~--~-~~y~~~~~l~~yl~~-~lg~s~~~a~~i~~~~~~~~~~~~l~~G~laDr~iGR-~~~i~i 123 (296)
.+.+||.+++..+..+ . .++......-.|+.+ +.+-+.+..|++++...++..++.++.|+.+.| .|+ |+-++.
T Consensus 29 ~~t~wrsi~l~~~~sfl~~v~~sI~~~s~wpYl~~lD~~A~~~ffG~viaa~slg~~i~~liF~~Ws~k-~~~~k~Pli~ 107 (488)
T KOG2325|consen 29 RKTNWRSIYLALLNSFLVAVQFSIYLTSMWPYLQKLDPTATATFFGLVIAASSLGHAIFSLIFGIWSNK-TGSVKKPLIV 107 (488)
T ss_pred cCCchHhHHHHHHHHHHHhhhheEEEeecchhhhhcCCCCCcchhhHHHHHHHHHHHhcchhhcccccc-cCCcccCHHH
Confidence 4679999988887777 3 333334445567754 366677788999999999999999999999999 675 777888
Q ss_pred HHHHHHHHHHHHHhhccccCCCCCccCCCCcCcCCCCchhhHHHHHHHHHHHHhhchhhhhhhhhhhccCCCccchhhHH
Q 045564 124 SSFISLLGTILLDSTATFDSLRPQRCDIGLSLCKAPSKVQFAVLYSGIALACLGLGGLRFTLATMGANQFEIPQHQGIFF 203 (296)
Q Consensus 124 ~~~l~~ig~~~la~~~~~p~~~~~~c~~~~~~~~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~~~ad~f~~~~~r~~~f 203 (296)
+.++.++|.++.......|. .....++++|++.|+|.|. .+..-+++++--- .+.|.+++
T Consensus 108 s~ii~~~g~llY~~l~~~~~------------------~~~y~mL~~R~l~Gvg~~n-~a~lR~Y~a~~s~-~~dR~rA~ 167 (488)
T KOG2325|consen 108 SFLIAIIGNLLYLALAYVPN------------------GVKYLMLVARILTGVGVGN-FAVLRAYIADAST-VEDRPRAF 167 (488)
T ss_pred HHHHHHHHHHHHHHHHhccc------------------chHHHHHHHHHHcCcCccc-HHHHHHHHHhccC-ccchHHHH
Confidence 89999999988733332332 1457889999999999874 5667777887543 22456666
Q ss_pred HHHHHHHHHHHHHHHHH----HHhhhccc---------cchhhHHHHHHHHHHHHHHH-HhCCCchhH
Q 045564 204 NWFFILTYASTVISSAA----FVYIEDNL---------SWRLGSGLNIAANLAGVVIF-LSGKHFYFP 257 (296)
Q Consensus 204 ~~~y~~~~iG~~i~p~v----~~~l~~~~---------gw~~~F~i~~~~~~~~~~~~-~~~~~~~~~ 257 (296)
+....+..+|..+||.+ ++...+.+ -+..+=|+.++...+.++++ +..++.++.
T Consensus 168 a~~~~~~vlg~ilGp~~q~~f~~Lg~~G~~i~~~~~~n~YTap~w~m~i~~i~~~v~i~~~f~E~~~~ 235 (488)
T KOG2325|consen 168 AATSGGFVLGIILGPTIQLAFTPLGEKGFMILPGLIFNMYTAPAWLMAILWIIYIVIILFFFKEVYRG 235 (488)
T ss_pred HHhhhHHHHHHHHhHHHHHHHhhhcCCceEEcCcceEEecchHHHHHHHHHHHHHHHHHhheeecccC
Confidence 65555445565566544 33322211 12344566666555555544 344445543
No 200
>PRK09848 glucuronide transporter; Provisional
Probab=98.68 E-value=1e-06 Score=85.11 Aligned_cols=143 Identities=11% Similarity=0.018 Sum_probs=92.6
Q ss_pred hHHHhHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhh---cchHHHH-HHHHHHHHHHHHHHHhhccc
Q 045564 66 LGEGWVANLMVYMIQEFHITSINSALISNIVNGFVNLFPVLGAIIADSF---LGSFQVI-WISSFISLLGTILLDSTATF 141 (296)
Q Consensus 66 ~~y~~~~~l~~yl~~~lg~s~~~a~~i~~~~~~~~~~~~l~~G~laDr~---iGR~~~i-~i~~~l~~ig~~~la~~~~~ 141 (296)
.+..+..+++.|+++.+|++..+++.+.++..+...+..++.|+++||. +||||.+ .++.+...+..+++. . .
T Consensus 23 ~~~~~~~~l~~y~~~~~gl~~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~~~~~Gr~~~~~~~~~~~~~~~~~~~~-~--~ 99 (448)
T PRK09848 23 AFAMGALFLLSYYTDVAGVGAAAAGTMLLLVRVFDAFADVFAGRVVDSVNTRWGKFRPFLLFGTAPLMIFSVLVF-W--V 99 (448)
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhhhheeeeecCCCCCcCchHHHHHHHHHHHHHHHHHH-h--C
Confidence 4444556788899999999999999999999999999999999999992 3777755 555554544333321 1 1
Q ss_pred cCCCCCccCCCCcCcCCCCchhhHHHHHHHHHHHHhhchhhhhhhhhhhccCCCccchhhHHHHHHHH-----HHHHHHH
Q 045564 142 DSLRPQRCDIGLSLCKAPSKVQFAVLYSGIALACLGLGGLRFTLATMGANQFEIPQHQGIFFNWFFIL-----TYASTVI 216 (296)
Q Consensus 142 p~~~~~~c~~~~~~~~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~~~ad~f~~~~~r~~~f~~~y~~-----~~iG~~i 216 (296)
|... +.......+++..++.+++.+...++..++..++.++.++|....++..++ .+++..+
T Consensus 100 ~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~r~~~~~~r~~~~~~~~~~~~~~~ 166 (448)
T PRK09848 100 PTDW-------------SHSSKVVYAYLTYMGLGLCYSLVNIPYGSLATAMTQQPQSRARLGAARGIAASLTFVCLAFLI 166 (448)
T ss_pred cCCC-------------CcchHHHHHHHHHHHHHHHHHHhcccHhhhhhhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2100 001112223444456677788777777777777776545677765554333 3455666
Q ss_pred HHHHHHhh
Q 045564 217 SSAAFVYI 224 (296)
Q Consensus 217 ~p~v~~~l 224 (296)
+|.+.+..
T Consensus 167 ~p~i~~~~ 174 (448)
T PRK09848 167 GPSIKNSS 174 (448)
T ss_pred HHHHHHhC
Confidence 66665543
No 201
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=98.67 E-value=2.2e-07 Score=86.22 Aligned_cols=126 Identities=13% Similarity=0.110 Sum_probs=91.8
Q ss_pred hHHHhHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhcchHHHHHHHHHHHHHHHHHHHhhccccCCC
Q 045564 66 LGEGWVANLMVYMIQEFHITSINSALISNIVNGFVNLFPVLGAIIADSFLGSFQVIWISSFISLLGTILLDSTATFDSLR 145 (296)
Q Consensus 66 ~~y~~~~~l~~yl~~~lg~s~~~a~~i~~~~~~~~~~~~l~~G~laDr~iGR~~~i~i~~~l~~ig~~~la~~~~~p~~~ 145 (296)
..+++..+.+.|+++.+|++..+++.+.++..+...++.+++|+++|| +|||+.+..+..+...+..++.+.. .
T Consensus 240 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r-~g~~~~~~~~~~~~~~~~~~~~~~~--~--- 313 (366)
T TIGR00886 240 SFLGVSSIFAMFFKDQFGLSKVTAGAYASLGGLLGSLARPLGGAISDR-LGGARKLLMSFLGVAMGAFLVVLGL--V--- 313 (366)
T ss_pred HHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHhhccchHHHh-hccchhHHHHHHHHHHHHHHHHhcC--C---
Confidence 566677888999999999999999998999999999999999999999 7999988877766666555444321 0
Q ss_pred CCccCCCCcCcCCCCchhhHHHHHHHHHHHHhhchhhhhhhhhhhccCCCccchhhHHHHHHHHHHHH
Q 045564 146 PQRCDIGLSLCKAPSKVQFAVLYSGIALACLGLGGLRFTLATMGANQFEIPQHQGIFFNWFFILTYAS 213 (296)
Q Consensus 146 ~~~c~~~~~~~~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~~~ad~f~~~~~r~~~f~~~y~~~~iG 213 (296)
+ ..+...+++..++.+++.|...+...+..++.+| + .++...++.+...++|
T Consensus 314 -------------~-~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-~-~~g~~~g~~~~~~~~g 365 (366)
T TIGR00886 314 -------------S-PLSLAVFIVLFVALFFFSGAGNGSTFALVPHIFR-R-ATGAVSGLVGAIGNLG 365 (366)
T ss_pred -------------C-cchHHHHHHHHHHHHHHhccccchhhhcchhhch-h-hcccHHHHHHHhccCC
Confidence 0 0023344445555566666666667778888887 3 5788888776665554
No 202
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=98.66 E-value=1.7e-06 Score=83.93 Aligned_cols=142 Identities=12% Similarity=0.075 Sum_probs=110.1
Q ss_pred hHHHhHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhcchHHHHHHHHHHHHHHHHHHHhhccccCCC
Q 045564 66 LGEGWVANLMVYMIQEFHITSINSALISNIVNGFVNLFPVLGAIIADSFLGSFQVIWISSFISLLGTILLDSTATFDSLR 145 (296)
Q Consensus 66 ~~y~~~~~l~~yl~~~lg~s~~~a~~i~~~~~~~~~~~~l~~G~laDr~iGR~~~i~i~~~l~~ig~~~la~~~~~p~~~ 145 (296)
++....+.+..|.+..+|.+...+.........+..++.++..++++| +|+|+++.++.++.+++.+++.+..
T Consensus 251 ~~~i~~s~~~yy~~y~lg~~~l~~~~~~~~~~~~~l~~~~~~p~L~~~-~gkk~~~~~~~~~~~i~~~~~~f~~------ 323 (467)
T COG2211 251 AFNIRGSIMVYYVTYVLGDPELFAYLLLLASGAGLLIGLILWPRLVKK-FGKKKLFLIGLLLLAVGYLLLYFTP------ 323 (467)
T ss_pred HHHHHhhhhheeEEEEcCChHHHHHHHHHHHHHHHHHHHHhHHHHHHH-hchHHHHHHHHHHHHHHHHHHHhhc------
Confidence 333344555667777889888888888888888888889999999999 7999999999999999988877653
Q ss_pred CCccCCCCcCcCCCCchhhHHHHHHHHHHHHhhchhhhhhhhhhhccCC------CccchhhHHHHHHHHHHHHHHHHHH
Q 045564 146 PQRCDIGLSLCKAPSKVQFAVLYSGIALACLGLGGLRFTLATMGANQFE------IPQHQGIFFNWFFILTYASTVISSA 219 (296)
Q Consensus 146 ~~~c~~~~~~~~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~~~ad~f~------~~~~r~~~f~~~y~~~~iG~~i~p~ 219 (296)
..+..++++..++.++|.+...+...++++|..+ ..++-+..++.+.+..=+|..++..
T Consensus 324 ---------------~~~~~l~~~~~~i~~~g~~~~~~l~wam~~d~vDyge~~TG~R~eGi~~s~~tF~~K~g~ala~~ 388 (467)
T COG2211 324 ---------------AGSVVLIVVALIIAGVGTGIANPLPWAMVADTVDYGEWKTGVRREGIVYSGMTFFRKLGLALAGF 388 (467)
T ss_pred ---------------CcchHHHHHHHHHHHHHhhccccccHHHhcchhhHHHHHhCCCchhhHHHHHHHHHHHHHHHHHH
Confidence 1245677788889999999999999999999887 1123345666677777788888887
Q ss_pred HHHhhhcccc
Q 045564 220 AFVYIEDNLS 229 (296)
Q Consensus 220 v~~~l~~~~g 229 (296)
+.|++....|
T Consensus 389 ~~g~~L~~~G 398 (467)
T COG2211 389 IPGWILGAIG 398 (467)
T ss_pred HHHHHHHHcC
Confidence 7777765444
No 203
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=98.57 E-value=1.1e-05 Score=77.32 Aligned_cols=158 Identities=11% Similarity=-0.039 Sum_probs=114.4
Q ss_pred HHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhcchHHHHHHHHHHHHHHHHHHHhhccccCCCCCccC
Q 045564 71 VANLMVYMIQEFHITSINSALISNIVNGFVNLFPVLGAIIADSFLGSFQVIWISSFISLLGTILLDSTATFDSLRPQRCD 150 (296)
Q Consensus 71 ~~~l~~yl~~~lg~s~~~a~~i~~~~~~~~~~~~l~~G~laDr~iGR~~~i~i~~~l~~ig~~~la~~~~~p~~~~~~c~ 150 (296)
..+...|+++.-|.+....+.+.++..+.-...-.+.+++-.| +|-++++.++.+.+++=..+.+... -|.
T Consensus 227 ~~f~~~yl~~~gg~~~~~~g~~~~l~~~aEi~~f~~~~~~~~r-~g~~~ll~~a~~~~~vR~~l~a~~~-~~~------- 297 (400)
T PF03825_consen 227 YTFFSIYLQELGGYSGSTIGILWALGVVAEIPFFFFSGRFLKR-FGIKWLLLLALVAYAVRWLLYAYFS-DPW------- 297 (400)
T ss_pred HHHHHHHHHHcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHh-cCHHHHHHHHHHHHHHHHHHHHHhc-CCc-------
Confidence 3566778876555777777777777788888888889999999 7999999999998887665555442 010
Q ss_pred CCCcCcCCCCchhhHHHHHHHHHHHHhhchhhhhhhhhhhccCCCccchhhHHHHHHHH-HHHHHHHHHHHHHhhhcccc
Q 045564 151 IGLSLCKAPSKVQFAVLYSGIALACLGLGGLRFTLATMGANQFEIPQHQGIFFNWFFIL-TYASTVISSAAFVYIEDNLS 229 (296)
Q Consensus 151 ~~~~~~~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~~~ad~f~~~~~r~~~f~~~y~~-~~iG~~i~p~v~~~l~~~~g 229 (296)
.......+.+..+-|+..|........++.+..|+ +.|.++-+++... ..+|..+|.+++|++.|++|
T Consensus 298 ----------~~~~~~~~l~q~lhG~tf~~~~~a~~~yi~~~~p~-~~~at~Q~l~~~~~~Glg~~iG~~igG~l~~~~g 366 (400)
T PF03825_consen 298 ----------PFIVALQLLGQLLHGLTFGLFHAASVRYIDRIAPP-ELRATAQGLYSALSFGLGGAIGSLIGGWLYDAFG 366 (400)
T ss_pred ----------HHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCc-cchHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhc
Confidence 01122334445678888888999999999999994 4788999986654 45899999999999999876
Q ss_pred chh------hHHHHHHHHHHHHHHH
Q 045564 230 WRL------GSGLNIAANLAGVVIF 248 (296)
Q Consensus 230 w~~------~F~i~~~~~~~~~~~~ 248 (296)
-+. .+.+.+++.++..+++
T Consensus 367 ~~~~~~~~~~~~v~a~~~~~~~~~f 391 (400)
T PF03825_consen 367 ARGMFDWSAVFLVFAVMALVILVLF 391 (400)
T ss_pred chhhhhHHHHHHHHHHHHHHHHHHH
Confidence 443 3445555444444444
No 204
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=98.55 E-value=3.8e-06 Score=78.85 Aligned_cols=164 Identities=13% Similarity=0.069 Sum_probs=111.1
Q ss_pred hHHHhHHHHH-HHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhcchHHHHHHHHHHHHHHHHHHHhhccccCC
Q 045564 66 LGEGWVANLM-VYMIQEFHITSINSALISNIVNGFVNLFPVLGAIIADSFLGSFQVIWISSFISLLGTILLDSTATFDSL 144 (296)
Q Consensus 66 ~~y~~~~~l~-~yl~~~lg~s~~~a~~i~~~~~~~~~~~~l~~G~laDr~iGR~~~i~i~~~l~~ig~~~la~~~~~p~~ 144 (296)
...++..++. .-+....|.+..+...+......+..++.-..|.++|+ +|||+.+.+..+...+.-.+ +..-|
T Consensus 91 ~m~~m~~s~i~~~l~~~w~~s~~q~~llt~~v~~gmllga~~w~l~~d~-~grr~~f~~T~l~t~v~~~i---s~~sp-- 164 (528)
T KOG0253|consen 91 AMEMMLLSLILPALDEVWGPSEGQAPLLTLSVFLGMLVGAMVWGLSADT-IGRRKGFNLTFLVTGVFGVI---SGASP-- 164 (528)
T ss_pred HHHHHHHHHHHHHHHhhhchhhhhhhHHHHHHHhhhhhhhhhhheehhh-hhcchhhhhhHHHHHHHHHh---hcCCC--
Confidence 4444444433 34455678888899999999999999999999999999 89999988876655442222 11112
Q ss_pred CCCccCCCCcCcCCCCchhhHHHHHHHHHHHHhhchhhhhhhhhhhccCCCccchhhHHHHHHHHHHHHHHHHHHHHHhh
Q 045564 145 RPQRCDIGLSLCKAPSKVQFAVLYSGIALACLGLGGLRFTLATMGANQFEIPQHQGIFFNWFFILTYASTVISSAAFVYI 224 (296)
Q Consensus 145 ~~~~c~~~~~~~~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~~~ad~f~~~~~r~~~f~~~y~~~~iG~~i~p~v~~~l 224 (296)
++..+++.|.+.++|.|+ .|...+.-.|..|.. .|....-.. .-..+|.++.-.+.=..
T Consensus 165 ------------------nf~~L~~f~~l~~~g~gg-~pv~~~~yle~lp~~-~r~~~~V~~-~~waig~v~ea~law~v 223 (528)
T KOG0253|consen 165 ------------------NFASLCVFRALWGFGVGG-LPVDSAIYLEFLPSS-HRWLLTVMS-FFWAIGQVFEALLAWGV 223 (528)
T ss_pred ------------------CeehhhHHHHHHhccCCC-ccHhHHHHHHhccCc-CCCcchhHH-HHHHHHHHHHHHHHHHH
Confidence 345678889999999998 888889999988843 233322222 33456777776666555
Q ss_pred hccccchhhHHHHHH-HHHHHHHH-HHhCCCchh
Q 045564 225 EDNLSWRLGSGLNIA-ANLAGVVI-FLSGKHFYF 256 (296)
Q Consensus 225 ~~~~gw~~~F~i~~~-~~~~~~~~-~~~~~~~~~ 256 (296)
..+.||||-...... .++.+.+. .+.++|||.
T Consensus 224 m~~~gwr~~l~~~~~pl~~~a~f~~w~~ESpRf~ 257 (528)
T KOG0253|consen 224 MSNFGWRYLLFTSSTPLMFAARFLVWVYESPRFY 257 (528)
T ss_pred HHhhhHHHHHHHHHhHHHHHHHHHhhcccCcchh
Confidence 677899987555444 33333333 356788886
No 205
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=98.54 E-value=1.4e-05 Score=75.51 Aligned_cols=137 Identities=13% Similarity=0.017 Sum_probs=93.4
Q ss_pred HHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhcchHHHHHHHHHHHHHHHHHHHhhccccCCCCCccCC
Q 045564 72 ANLMVYMIQEFHITSINSALISNIVNGFVNLFPVLGAIIADSFLGSFQVIWISSFISLLGTILLDSTATFDSLRPQRCDI 151 (296)
Q Consensus 72 ~~l~~yl~~~lg~s~~~a~~i~~~~~~~~~~~~l~~G~laDr~iGR~~~i~i~~~l~~ig~~~la~~~~~p~~~~~~c~~ 151 (296)
...+.|+.+.+|.+..+.+........+..++.++.+++.|| +||+... +.....++.+.+........
T Consensus 228 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~-~~~~~~~--~~~~~~~~~~~~~~~~~~~~-------- 296 (394)
T PRK11652 228 ACSGVLMGAVLGLSSMTVSILFILPIPAAFFGAWFAGRPNKR-FSTLMWQ--SVICCLLAGLLMWIPGWFGV-------- 296 (394)
T ss_pred HhChHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHH--HHHHHHHHHHHHHHHHHhcc--------
Confidence 345667888899999998888777777788888888888888 5743322 22222222222221110000
Q ss_pred CCcCcCCCCchhhHHHHHHHHHHHHhhchhhhhhhhhhhccCCCccchhhHHHHHHHHHHHHHHHHHHHHHhhhccccch
Q 045564 152 GLSLCKAPSKVQFAVLYSGIALACLGLGGLRFTLATMGANQFEIPQHQGIFFNWFFILTYASTVISSAAFVYIEDNLSWR 231 (296)
Q Consensus 152 ~~~~~~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~~~ad~f~~~~~r~~~f~~~y~~~~iG~~i~p~v~~~l~~~~gw~ 231 (296)
.+...++++.++.++|.+...+...+...|.+| + .++...++.+...++|+.+++.+.+++.+...+.
T Consensus 297 ----------~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~-~-~~g~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~ 364 (394)
T PRK11652 297 ----------MNVWTLLVPAALFFFGAGMLFPLATSGAMEPFP-Y-LAGTAGALLGGLQNIGSGLAALLSAMLPQTGQFS 364 (394)
T ss_pred ----------ccHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc-c-cchHHHHHHHHHHHHHHHHHHHHHHHccCCchHH
Confidence 122445666778888888888999998889887 3 5688888888888999999999999887654333
No 206
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=98.49 E-value=7.9e-06 Score=80.00 Aligned_cols=173 Identities=8% Similarity=-0.071 Sum_probs=117.8
Q ss_pred hHHHhHHHHHHHHHHHhCCChhH----HHHHHHHHHHHHHHHHHHHHH----HhhhhcchHHH--HHHHHHHHHHHHHHH
Q 045564 66 LGEGWVANLMVYMIQEFHITSIN----SALISNIVNGFVNLFPVLGAI----IADSFLGSFQV--IWISSFISLLGTILL 135 (296)
Q Consensus 66 ~~y~~~~~l~~yl~~~lg~s~~~----a~~i~~~~~~~~~~~~l~~G~----laDr~iGR~~~--i~i~~~l~~ig~~~l 135 (296)
.+....+.++.|..+..+.+... .+++.++..+...+..++..+ +.||..+.+.. +.+|.++..++.+.+
T Consensus 287 ~~~Q~~s~l~l~~~~~~~~~~~~~~ip~~~~~~~n~~~iil~~p~~~~~~~~l~~~~~~~~~~~k~~~G~~l~~~~~~~~ 366 (475)
T TIGR00924 287 LYAQMPTSLNFFADNNMHHEMLGMSVPVIWFQSLNPFWVVVGSPVLAMIWTRLGRKGKDPTTPLKFTLGMLFCGASFLTF 366 (475)
T ss_pred HHHHhhhHHHHHHHHhccccccceEECHHHHHhhhHHHHHHHHHHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHH
Confidence 44445566777777665544222 556677777766666666444 44441122333 377888888887777
Q ss_pred HhhccccCCCCCccCCCCcCcCCCCchhhHHHHHHHHHHHHhhchhhhhhhhhhhccCCCccchhhHHHHHHHHHHHHHH
Q 045564 136 DSTATFDSLRPQRCDIGLSLCKAPSKVQFAVLYSGIALACLGLGGLRFTLATMGANQFEIPQHQGIFFNWFFILTYASTV 215 (296)
Q Consensus 136 a~~~~~p~~~~~~c~~~~~~~~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~~~ad~f~~~~~r~~~f~~~y~~~~iG~~ 215 (296)
++..... +.+...+.+.+....++.++|.....|...++.+++.|+ +.|+..++.++.+..+|..
T Consensus 367 ~~~~~~~--------------~~~~~~s~~~~i~~~~~~~~ge~~~~p~~~~~~~~~aP~-~~~g~~~g~~~l~~~~g~~ 431 (475)
T TIGR00924 367 AASIWFA--------------DAGGLTSPWFMVLIYLFQTLGELMISPLGLSWWTKIAPQ-RLMGQMLGMWFLAQAMGSL 431 (475)
T ss_pred HHHHhhc--------------CCCCccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCCH-HHHHHHHHHHHHHHHHHHH
Confidence 6542110 000112456678888999999999999999999999994 4799999999999999999
Q ss_pred HHHHHHHhhhccccchhhHHHHHHHHHHHHHHHHhCCC
Q 045564 216 ISSAAFVYIEDNLSWRLGSGLNIAANLAGVVIFLSGKH 253 (296)
Q Consensus 216 i~p~v~~~l~~~~gw~~~F~i~~~~~~~~~~~~~~~~~ 253 (296)
+++.+.....+..+|...|...++++++..++++...|
T Consensus 432 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 469 (475)
T TIGR00924 432 LGGYLATFGAVPQGVTGVFGKIGLVTLLVGVVMALMVP 469 (475)
T ss_pred HHHHHHHHHhcccchhhHHHHHHHHHHHHHHHHHHHHH
Confidence 99988887777668888887777766555555544444
No 207
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=98.48 E-value=1.6e-06 Score=83.17 Aligned_cols=159 Identities=14% Similarity=0.062 Sum_probs=87.8
Q ss_pred hHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhcchHHHHHHHHHHHHH--HHHHHHhhccccCCCCC
Q 045564 70 WVANLMVYMIQEFHITSINSALISNIVNGFVNLFPVLGAIIADSFLGSFQVIWISSFISLL--GTILLDSTATFDSLRPQ 147 (296)
Q Consensus 70 ~~~~l~~yl~~~lg~s~~~a~~i~~~~~~~~~~~~l~~G~laDr~iGR~~~i~i~~~l~~i--g~~~la~~~~~p~~~~~ 147 (296)
..++.+.+++++.|++.++.+.+.++..+...+.+++.|.++|| +|.||-+++...+..+ |-...... .|.+.
T Consensus 26 ~~pF~~iWL~~~~GLs~~~iG~i~s~~~~~~l~~qp~~G~i~Dk-lg~kK~Ll~~i~~l~~l~~pff~~v~--~pll~-- 100 (412)
T PF01306_consen 26 FLPFFPIWLTQVAGLSGTEIGIIFSAGSLFALLAQPVYGFISDK-LGLKKHLLWFIAILLLLFGPFFIYVF--GPLLQ-- 100 (412)
T ss_dssp HHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHTHHHHHHHHHH-CTTCSHHHHHHHHHHHTCHHHHHHTH--HHHHH--
T ss_pred HHHHHHHHHccccCCCHHHHHHHHHHHHHHHHHHHHhHHHhcch-hhhhHHHHHHHHHHHHHHHHHHHHHH--HHHHH--
Confidence 45778899999999999999999999999999999999999999 7977765544332211 11111111 12210
Q ss_pred ccCCCCcCcCCCCchhhHHHHHHHHHHHHhhchhhhhhhhhhhccCCCccchhh--HHHHHHHHHHHHHHHHHHHHHhhh
Q 045564 148 RCDIGLSLCKAPSKVQFAVLYSGIALACLGLGGLRFTLATMGANQFEIPQHQGI--FFNWFFILTYASTVISSAAFVYIE 225 (296)
Q Consensus 148 ~c~~~~~~~~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~~~ad~f~~~~~r~~--~f~~~y~~~~iG~~i~p~v~~~l~ 225 (296)
.-++++.++.++..+.......+ +.|.+-+|..|.. =|+---+-..+|-+++..++|++.
T Consensus 101 -----------------~n~~lg~iig~i~l~~~f~~~~~-~~Ea~~er~sr~~~feYG~~R~wGSig~ai~s~~~G~L~ 162 (412)
T PF01306_consen 101 -----------------SNFWLGAIIGGIYLGLVFNAGVP-LSEAYAERVSRRNGFEYGRARMWGSIGFAIASLLAGILF 162 (412)
T ss_dssp -----------------TT-HHHHHHTTTTTTTTTTTHHH-HHHHHHHHHHHHHSS-HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred -----------------HHHHHHHHHHHHHHHHHHcccch-HHHHHHHHHHHHhcCCcchHHHHhhHHHHHHHHHhheee
Confidence 01223333333333322221111 1243332212222 223333445778888888899887
Q ss_pred ccccchhhHHHHHHHHHHHHHHHHhCC
Q 045564 226 DNLSWRLGSGLNIAANLAGVVIFLSGK 252 (296)
Q Consensus 226 ~~~gw~~~F~i~~~~~~~~~~~~~~~~ 252 (296)
+ .+-+..||+..+..++..++.+..+
T Consensus 163 ~-i~p~~~fwi~s~~~~il~lll~~~~ 188 (412)
T PF01306_consen 163 N-INPNIIFWIASAAAIILLLLLLLLK 188 (412)
T ss_dssp H-HHHHHHHHHHHHHHHHHHHHHHSS-
T ss_pred e-eCccHHHHHHHHHHHHHHHHHHHcC
Confidence 5 3556788987765444444444443
No 208
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=98.46 E-value=1.3e-05 Score=72.07 Aligned_cols=149 Identities=12% Similarity=0.077 Sum_probs=98.3
Q ss_pred chhHHHHHHHHH-H-hHHHhHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhcchHHHHHHHHHHHHH
Q 045564 53 RTALLSRTVTCL-T-LGEGWVANLMVYMIQEFHITSINSALISNIVNGFVNLFPVLGAIIADSFLGSFQVIWISSFISLL 130 (296)
Q Consensus 53 ~~~~~~l~~~~~-~-~~y~~~~~l~~yl~~~lg~s~~~a~~i~~~~~~~~~~~~l~~G~laDr~iGR~~~i~i~~~l~~i 130 (296)
|-.+...+.+.. . +.|....+ ...+++.+|+|++|...+...-.++..++ ++.|.+.|+ +|.+.++.+|.+...+
T Consensus 2 W~~l~a~~~v~~~~Gt~Y~Fs~y-S~~Lk~~l~~sq~~l~~l~~~~~~G~~~G-~~~G~l~d~-~gp~~~l~iG~~~~~~ 78 (250)
T PF06813_consen 2 WLSLVASIWVQLCSGTTYTFSAY-SPQLKSRLGYSQSQLNTLSTAGDIGSYFG-ILAGLLYDR-FGPWVVLLIGAVLGFV 78 (250)
T ss_pred hhhHHHHHHHHHhcCcccchhhh-hHHHHHHhCCCHHHHHHHHHHHHHHhhcc-HHHHHHHHh-cchHHHHHHHHHHHHH
Confidence 444444444445 4 66654433 44778899999999999999999988875 788999999 7999999999999999
Q ss_pred HHHHHHhhccccCCCCCccCCCCcCcCCCCchhhHHHHHHHHHHHHhhchhhhhhhhhhhccCCCccchhhHHHHHHHHH
Q 045564 131 GTILLDSTATFDSLRPQRCDIGLSLCKAPSKVQFAVLYSGIALACLGLGGLRFTLATMGANQFEIPQHQGIFFNWFFILT 210 (296)
Q Consensus 131 g~~~la~~~~~p~~~~~~c~~~~~~~~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~~~ad~f~~~~~r~~~f~~~y~~~ 210 (296)
|+.++.++.. ... + ....+.+.+...+.+.+.+......-....+-||+ .|+...++.--..
T Consensus 79 GY~~~~l~~~-~~i--------------~-~~~~~~~~~~~~l~~~s~~~~~ta~lvt~~~NFP~--~RG~vvgilk~~~ 140 (250)
T PF06813_consen 79 GYGLLWLAVS-GRI--------------P-SLPVWLMCLFLFLGGNSSCWFNTASLVTCVRNFPR--SRGTVVGILKGFF 140 (250)
T ss_pred HHHHHHHHHh-Ccc--------------C-ccchHHHHHHHHHHcccHHHhhhHHHHHHHHhCcc--ccCceehhhhHHH
Confidence 9998887631 000 0 01234444444555555554444444445578983 4788887754444
Q ss_pred HHHHHHHHHHHH
Q 045564 211 YASTVISSAAFV 222 (296)
Q Consensus 211 ~iG~~i~p~v~~ 222 (296)
.+++.+-..+..
T Consensus 141 GLSaai~t~i~~ 152 (250)
T PF06813_consen 141 GLSAAIFTQIYS 152 (250)
T ss_pred HhHHHHHHHHHH
Confidence 555544333333
No 209
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=98.45 E-value=1.2e-05 Score=70.14 Aligned_cols=142 Identities=19% Similarity=0.209 Sum_probs=102.5
Q ss_pred HHHHhCCCh--hHHHHHHHHHHHHHHHHHHHHHHHhhhhcchHHHHHHHHHHHHHHHHHHHhhccccCCCCCccCCCCcC
Q 045564 78 MIQEFHITS--INSALISNIVNGFVNLFPVLGAIIADSFLGSFQVIWISSFISLLGTILLDSTATFDSLRPQRCDIGLSL 155 (296)
Q Consensus 78 l~~~lg~s~--~~a~~i~~~~~~~~~~~~l~~G~laDr~iGR~~~i~i~~~l~~ig~~~la~~~~~p~~~~~~c~~~~~~ 155 (296)
....++.+. ...+...+.+.....++.++.|.++|| +|||+.+..+.....++.++..+.. .
T Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~-~g~~~~~~~~~~~~~~~~~~~~~~~---~------------ 91 (338)
T COG0477 28 LLSTLSLSSGRLLYGLLLSAFFLGYAIGSLLAGPLGDR-YGRRKVLIIGLLLFLLGTLLLALAP---N------------ 91 (338)
T ss_pred HHHHcCCCchhHHHHHHHHHHHHHHHHHhhhhhhcccc-ccchHHHHHHHHHHHHHHHHHHhCc---c------------
Confidence 334455544 477888888999999999999999999 5999888888766555534333322 0
Q ss_pred cCCCCchhhHHHHHHHHHHHHhhchhhhhhhhhhhccCCCccchhhHHHHHHH-HHHHHHHHHHHHHHhhhcc--ccchh
Q 045564 156 CKAPSKVQFAVLYSGIALACLGLGGLRFTLATMGANQFEIPQHQGIFFNWFFI-LTYASTVISSAAFVYIEDN--LSWRL 232 (296)
Q Consensus 156 ~~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~~~ad~f~~~~~r~~~f~~~y~-~~~iG~~i~p~v~~~l~~~--~gw~~ 232 (296)
.....+++.|++.|++.+...+...+++.|.+|++..|+...+.... ...+|..++|.+.+.+... .+|++
T Consensus 92 ------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (338)
T COG0477 92 ------VGLALLLILRLLQGLGGGGLLPVASALLSEWFPEATERGLAVGLVTLGAGALGLALGPLLAGLLLGALLWGWRA 165 (338)
T ss_pred ------chHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHH
Confidence 13467788888899999999999999999999840256777777666 4677888888776666543 57888
Q ss_pred hHHHHHHHH
Q 045564 233 GSGLNIAAN 241 (296)
Q Consensus 233 ~F~i~~~~~ 241 (296)
.|.+.....
T Consensus 166 ~~~~~~~~~ 174 (338)
T COG0477 166 AFLLAALLG 174 (338)
T ss_pred HHHHHHHHH
Confidence 666665544
No 210
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=98.42 E-value=2.2e-05 Score=74.67 Aligned_cols=162 Identities=14% Similarity=0.071 Sum_probs=127.5
Q ss_pred hHHHhHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhcchHHHHHHHHHHHHHHHHHHHhhccccCCC
Q 045564 66 LGEGWVANLMVYMIQEFHITSINSALISNIVNGFVNLFPVLGAIIADSFLGSFQVIWISSFISLLGTILLDSTATFDSLR 145 (296)
Q Consensus 66 ~~y~~~~~l~~yl~~~lg~s~~~a~~i~~~~~~~~~~~~l~~G~laDr~iGR~~~i~i~~~l~~ig~~~la~~~~~p~~~ 145 (296)
+++.--..+-+|--+.||++..+.+.+...+.++..++-.+.|++..|..|.+++-.+++.+..++..++.++...
T Consensus 223 a~~~QD~iLEPygg~Vfgmsv~eTT~Lta~~~~G~L~G~~~~g~~l~~~~~~~~~a~~G~~~~~~~f~lii~a~~~---- 298 (403)
T PF03209_consen 223 AFFMQDVILEPYGGEVFGMSVGETTRLTAFWGGGTLLGMLLAGFLLSRRLGKKRTAALGCLLGALAFALIILAGPL---- 298 (403)
T ss_pred HHHhhHHHcCCchhHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHHHhc----
Confidence 4444444555777888999999999999999999999999999998865899999999999999888887776521
Q ss_pred CCccCCCCcCcCCCCchhhHHHHHHHHHHHHhhchhhhhhhhhhhccCCCccchhhHHHHHHHHHHHHHHHHHHHHHhhh
Q 045564 146 PQRCDIGLSLCKAPSKVQFAVLYSGIALACLGLGGLRFTLATMGANQFEIPQHQGIFFNWFFILTYASTVISSAAFVYIE 225 (296)
Q Consensus 146 ~~~c~~~~~~~~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~~~ad~f~~~~~r~~~f~~~y~~~~iG~~i~p~v~~~l~ 225 (296)
.+.+.|..+.+++|++.|......-+.+-|+-. +++.+...+.+..+..++..+|..++|.+.
T Consensus 299 ----------------~~~~~~~~~~~l~G~g~G~f~vgals~mM~lt~-~~~aG~~mG~WGaaQA~A~Glg~~~GG~~~ 361 (403)
T PF03209_consen 299 ----------------GSPWLFRPGVFLLGLGNGLFTVGALSLMMDLTS-AGRAGLFMGAWGAAQAIARGLGTFLGGALR 361 (403)
T ss_pred ----------------ccchHHHHHHHHHHHhhhHHHHHHHHHHHhCCC-CcchhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 234678889999999999988888888888886 345778888888888888888887777665
Q ss_pred cc----------ccchhhHHHHHHHHHHHHHHH
Q 045564 226 DN----------LSWRLGSGLNIAANLAGVVIF 248 (296)
Q Consensus 226 ~~----------~gw~~~F~i~~~~~~~~~~~~ 248 (296)
|- .+|..+|.+-++.+++++++.
T Consensus 362 D~~~~~~~~~~~~aY~~VF~lEa~ll~~a~~ll 394 (403)
T PF03209_consen 362 DLVRALFGNSPALAYGVVFALEAVLLLAALVLL 394 (403)
T ss_pred HHHHHhccCCcchHHHHHHHHHHHHHHHHHHHH
Confidence 41 346677777777776666554
No 211
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=98.41 E-value=1.9e-05 Score=75.83 Aligned_cols=157 Identities=11% Similarity=0.064 Sum_probs=118.1
Q ss_pred hHHHhHHHHHHHHHHHhC---CChhHHHHHHHHHHHHHHHHHHHHHHHhhhhcchHHHHHHHHHHHHHHHHHHHhhcccc
Q 045564 66 LGEGWVANLMVYMIQEFH---ITSINSALISNIVNGFVNLFPVLGAIIADSFLGSFQVIWISSFISLLGTILLDSTATFD 142 (296)
Q Consensus 66 ~~y~~~~~l~~yl~~~lg---~s~~~a~~i~~~~~~~~~~~~l~~G~laDr~iGR~~~i~i~~~l~~ig~~~la~~~~~p 142 (296)
.|+..-...+.|.+..++ .+....+.+.++..+.-.+.-.+..++-+| +|-|+.++++.++..+=.+.++++.
T Consensus 235 ~Y~vfdqqf~~y~~~~f~~~~~g~~~~G~l~s~~v~~E~~~m~~~p~li~r-ig~k~~Lllag~i~~iRi~~~~~~~--- 310 (412)
T PF01306_consen 235 IYDVFDQQFPIYFASFFQSAGQGNQMYGYLWSVQVFLEALMMFFSPWLINR-IGAKNLLLLAGVIMAIRIIGSGFAT--- 310 (412)
T ss_dssp HHHHHHHHHHHHHHHTSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-H-HHHHHHHHHHHHHHHHHHHHT-----
T ss_pred HHHHHHHHHHHHHHHHhcccccChhHHhHHHHHHHHHHHHHHHHHHHHHHh-cChHhHHHHHHHHHHHHHHHHhhhc---
Confidence 455444456777776544 234445677888888888888999999999 7999999999988887655555442
Q ss_pred CCCCCccCCCCcCcCCCCchhhHHHHHHHHHHHHhhchhhhhhhhhhhccCCCccchhhHHHH-HHHHHHHHHHHHHHHH
Q 045564 143 SLRPQRCDIGLSLCKAPSKVQFAVLYSGIALACLGLGGLRFTLATMGANQFEIPQHQGIFFNW-FFILTYASTVISSAAF 221 (296)
Q Consensus 143 ~~~~~~c~~~~~~~~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~~~ad~f~~~~~r~~~f~~-~y~~~~iG~~i~p~v~ 221 (296)
+.+.+.+...+-++-.+......--++++.||+| ...+.+.+ +.++..+|..+.+.++
T Consensus 311 --------------------~~~~i~~~klLH~~e~~l~lva~fkYI~~~fd~r-lsAt~y~v~~~~~~~~~~~i~s~~~ 369 (412)
T PF01306_consen 311 --------------------NPWVISLIKLLHALEFPLLLVAAFKYITAHFDKR-LSATLYLVGFQFAKQIGIIILSPLA 369 (412)
T ss_dssp --------------------SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS-GG-GHHHHHHHHHTTTHHHHHHHHHHHH
T ss_pred --------------------chHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHh-HHHHHHHHHHHHHHHHHHHHHhhhH
Confidence 3456777788888888888888899999999854 56677777 5688889999999999
Q ss_pred HhhhccccchhhHHHHHHHHHHHHHH
Q 045564 222 VYIEDNLSWRLGSGLNIAANLAGVVI 247 (296)
Q Consensus 222 ~~l~~~~gw~~~F~i~~~~~~~~~~~ 247 (296)
|++.|+.|++..|++.+.+.++..++
T Consensus 370 G~lyd~~G~~~tylimg~iv~~~~li 395 (412)
T PF01306_consen 370 GYLYDRIGFQHTYLIMGLIVLPFTLI 395 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HhhHhhcCcHHHHHHHHHHHHHHHHH
Confidence 99999999999998877655544433
No 212
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=98.32 E-value=2.1e-05 Score=76.38 Aligned_cols=175 Identities=11% Similarity=0.089 Sum_probs=119.2
Q ss_pred hhHHHHHHHHH-H-hHHHhHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhh---cchHHH-HHHHHHH
Q 045564 54 TALLSRTVTCL-T-LGEGWVANLMVYMIQEFHITSINSALISNIVNGFVNLFPVLGAIIADSF---LGSFQV-IWISSFI 127 (296)
Q Consensus 54 ~~~~~l~~~~~-~-~~y~~~~~l~~yl~~~lg~s~~~a~~i~~~~~~~~~~~~l~~G~laDr~---iGR~~~-i~i~~~l 127 (296)
..+....+-.. + .+-.+..++..|.++.+|++...++.+..+.=+.-++.-|+.|.++||. +||+|- ++++.+.
T Consensus 13 eki~Yg~gd~~~~~~~~~~~~yLl~fYTdv~Gis~~~aG~iflv~RiiDAi~DP~~G~i~D~t~~r~GrfRP~lL~g~ip 92 (467)
T COG2211 13 EKIGYGLGDFASNFAFGIVVLYLLFFYTDVFGLSAALAGTIFLVARIIDAITDPIMGFIVDRTRSRWGRFRPWLLWGAIP 92 (467)
T ss_pred HHHhhcchhhHHHHHHHHHHHHHHHHHhcccCCcHHHHHHHHHHHHHHHHHhcchheeeecccccccccccHHHHHHhHH
Confidence 33444444333 4 4455677889999999999999999999999999999999999999973 587665 5566677
Q ss_pred HHHHHHHHHhhccccCCCCCccCCCCcCcCCCCchhhHHHHHHHHHHHHhhchhhhhhhhhhhccCCCccchhhHHHHHH
Q 045564 128 SLLGTILLDSTATFDSLRPQRCDIGLSLCKAPSKVQFAVLYSGIALACLGLGGLRFTLATMGANQFEIPQHQGIFFNWFF 207 (296)
Q Consensus 128 ~~ig~~~la~~~~~p~~~~~~c~~~~~~~~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~~~ad~f~~~~~r~~~f~~~y 207 (296)
.++...++..+. .+. .+....-.++-.++.+++...+..+-.++.+++-++.++|.+..+|..
T Consensus 93 ~~i~~~l~F~~p---~~~--------------~~~k~~ya~vtY~l~~l~YT~vniPy~al~~~iT~d~~ER~~l~s~R~ 155 (467)
T COG2211 93 FAIVAVLLFITP---DFS--------------MTGKLIYALVTYMLLGLGYTLVNIPYGALGPEITQDPQERASLTSWRM 155 (467)
T ss_pred HHHHHHHHHcCC---Ccc--------------cCcchHHHHHHHHHHHHHHHheeCchhhcchhhcCCHHHHHHHHHHHH
Confidence 766555544432 110 012233444556678888888888888999999887778999999988
Q ss_pred HHHHHHHHHHHHHHHhhhc-------cccchhhHHHHHHHHHHHH
Q 045564 208 ILTYASTVISSAAFVYIED-------NLSWRLGSGLNIAANLAGV 245 (296)
Q Consensus 208 ~~~~iG~~i~p~v~~~l~~-------~~gw~~~F~i~~~~~~~~~ 245 (296)
+..++|..+...+.+.+.. ..||+..-++..++..+.+
T Consensus 156 ~~~~~g~~l~~~~~~plv~~~g~~~~~~g~~~~~~~~~vi~~i~~ 200 (467)
T COG2211 156 VFASLGGLLVAVLFPPLVKLFGGGDKALGYQGTALVLGVIGVILL 200 (467)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCcchhhHHHHHHHHHHHHHHHH
Confidence 8888886665554444432 2245544444444433333
No 213
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=98.32 E-value=2.9e-05 Score=73.63 Aligned_cols=138 Identities=11% Similarity=0.030 Sum_probs=106.0
Q ss_pred hHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhcchHHHHHHHHHHHHHHHHHHHhhccccCCCCCcc
Q 045564 70 WVANLMVYMIQEFHITSINSALISNIVNGFVNLFPVLGAIIADSFLGSFQVIWISSFISLLGTILLDSTATFDSLRPQRC 149 (296)
Q Consensus 70 ~~~~l~~yl~~~lg~s~~~a~~i~~~~~~~~~~~~l~~G~laDr~iGR~~~i~i~~~l~~ig~~~la~~~~~p~~~~~~c 149 (296)
+.++++.|+.+..|++..+++..++.+-++..+|-.++-++-.| +-..|.+.+.++...+-.+..++..
T Consensus 255 ~gsfl~~y~~~~~g~~~~~aa~~~s~~~~~~~vGRFig~~lm~~-~~~~k~Laf~a~~~ill~~~~~l~~---------- 323 (422)
T COG0738 255 IGSFLVSYLEELLGLNEQQAAYYLSFFWVGFMVGRFIGSALMSR-IKPEKYLAFYALIAILLLLAVALIG---------- 323 (422)
T ss_pred HHHHHHHHHHhcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCHHHHHHHHHHHHHHHHHHHHHhc----------
Confidence 45788999998899999999999999999999999999999889 7888888877765544222222221
Q ss_pred CCCCcCcCCCCchhhHHHHHHHHHHHHhhchhhhhhhhhhhccCCCccchhhHHHHHHHHHHHHHHHHHHHHHhhhcccc
Q 045564 150 DIGLSLCKAPSKVQFAVLYSGIALACLGLGGLRFTLATMGANQFEIPQHQGIFFNWFFILTYASTVISSAAFVYIEDNLS 229 (296)
Q Consensus 150 ~~~~~~~~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~~~ad~f~~~~~r~~~f~~~y~~~~iG~~i~p~v~~~l~~~~g 229 (296)
+ ..-+.+.++.|+..+.+.|.+.+...+-.|++...+++. -....+|+.+-|.+.|++.|..|
T Consensus 324 -------------g-~v~~~~l~~ig~F~simfPTIfslal~~l~~~ts~~s~~---l~maivGGAiiP~l~G~i~d~~g 386 (422)
T COG0738 324 -------------G-VVALYALFLIGLFNSIMFPTIFSLALKNLGEHTSVGSGL---LVMAIVGGAIIPPLQGVIADMFG 386 (422)
T ss_pred -------------C-hHHHHHHHHHHHHhHHHHHHHHHHHHhccCcccccccee---eeeheecchHHHHHHHHHHHhhh
Confidence 1 233445678889999999999999999998554455544 23345688889999999999988
Q ss_pred chhhHH
Q 045564 230 WRLGSG 235 (296)
Q Consensus 230 w~~~F~ 235 (296)
-...+.
T Consensus 387 ~~~~~~ 392 (422)
T COG0738 387 IQLTFL 392 (422)
T ss_pred hHHHHH
Confidence 777766
No 214
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=98.29 E-value=9.9e-05 Score=70.74 Aligned_cols=155 Identities=20% Similarity=0.089 Sum_probs=97.4
Q ss_pred hHHHhHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhcchHHHHHHHHHHHHHHHHHHHhhccccCCC
Q 045564 66 LGEGWVANLMVYMIQEFHITSINSALISNIVNGFVNLFPVLGAIIADSFLGSFQVIWISSFISLLGTILLDSTATFDSLR 145 (296)
Q Consensus 66 ~~y~~~~~l~~yl~~~lg~s~~~a~~i~~~~~~~~~~~~l~~G~laDr~iGR~~~i~i~~~l~~ig~~~la~~~~~p~~~ 145 (296)
.+++....+|.|+.+.+|.+..+.++......++..++..+.+.+.++ .+++|.+.....+..+|.+++.+.....
T Consensus 233 ~~~~~~~~~P~~l~~~~g~s~~~~gl~~~~~~~~~~i~~~l~~~~~~~-~~~~~~~~~~~~~~~ig~~l~~~~~~~~--- 308 (413)
T PRK15403 233 PMMSWVAVSPVILIDAGGMTTSQFAWTQVPVFGAVIVANAIVARFVKD-PTEPRFIWRAVPIQLVGLALLIVGNLLW--- 308 (413)
T ss_pred HHHHHHHhChHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcc-CCchhHHHHHHHHHHHHHHHHHHHHHHc---
Confidence 566666777889999999999999888776777777777777766544 2444444444444444544443321000
Q ss_pred CCccCCCCcCcCCCCchhhHHHHHHHHHHHHhhchhhhhhhhhhhccCCCccchhhHHHHHHHHHHHHHHHHHHHHHhhh
Q 045564 146 PQRCDIGLSLCKAPSKVQFAVLYSGIALACLGLGGLRFTLATMGANQFEIPQHQGIFFNWFFILTYASTVISSAAFVYIE 225 (296)
Q Consensus 146 ~~~c~~~~~~~~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~~~ad~f~~~~~r~~~f~~~y~~~~iG~~i~p~v~~~l~ 225 (296)
+ .....++++.++.++|.+...|+.....-.+.+ ..+++..+.+......+..+++.+.+++.
T Consensus 309 -------------~--~~~~~~~~~~~l~~~G~~~~~p~~~~~al~~~~--~~~G~a~a~~~~~~~~~~~~~~~~~g~~~ 371 (413)
T PRK15403 309 -------------P--HVWLWSVLGTSLYAFGIGLIFPTLFRFTLFSNN--LPKGTVSASLNMVILMVMAVSVEIGRWLW 371 (413)
T ss_pred -------------c--ccHHHHHHHHHHHHHHHHHHhHHHHHHHhccCC--CCCcHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0 112234567778888888888877753333332 23566666666666677778888888887
Q ss_pred ccccchhhHHHHHHHHH
Q 045564 226 DNLSWRLGSGLNIAANL 242 (296)
Q Consensus 226 ~~~gw~~~F~i~~~~~~ 242 (296)
++ +-.++|.+..++..
T Consensus 372 ~~-~~~~~~~~~~~~~~ 387 (413)
T PRK15403 372 FN-GGRLPFHLLAVVAG 387 (413)
T ss_pred Hc-CCchHHHHHHHHHH
Confidence 65 55667766655444
No 215
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=98.26 E-value=6.5e-05 Score=74.06 Aligned_cols=149 Identities=13% Similarity=0.003 Sum_probs=99.3
Q ss_pred HHHHHHHHHHHHHHHHHHH----HHHhhhhcchHHHHHHHHHHHHHHHHHHHhhccccCCCCCccCCCCcCcCCCCchhh
Q 045564 89 SALISNIVNGFVNLFPVLG----AIIADSFLGSFQVIWISSFISLLGTILLDSTATFDSLRPQRCDIGLSLCKAPSKVQF 164 (296)
Q Consensus 89 a~~i~~~~~~~~~~~~l~~----G~laDr~iGR~~~i~i~~~l~~ig~~~la~~~~~p~~~~~~c~~~~~~~~~~~~~~~ 164 (296)
.+++.++..+...+..++. +++.|| ++..+.+.++.++..+|.+.+.+....+. .....+.
T Consensus 318 ~~~~~s~n~i~iil~~p~~~~~~~~l~~r-~~~~~~~~~G~~l~~l~f~~l~~~~~~~~--------------~~~~vs~ 382 (500)
T PRK09584 318 PEQYQALNPFWIMIGSPILAAIYNKMGDR-LPMPHKFAIGMVLCSGAFLVLPLGAKFAN--------------DAGIVSV 382 (500)
T ss_pred HHHHHHHhHHHHHHHHHHHHHHHHHhCcC-CCcHHHHHHHHHHHHHHHHHHHHHHHhcC--------------CCCccCH
Confidence 4455566666666666666 555666 56668899999999999888776532110 0011234
Q ss_pred HHHHHHHHHHHHhhchhhhhhhhhhhccCCCccchhhHHHHHHHHHHHHHHHHHHHHHhhhc----------cccchhhH
Q 045564 165 AVLYSGIALACLGLGGLRFTLATMGANQFEIPQHQGIFFNWFFILTYASTVISSAAFVYIED----------NLSWRLGS 234 (296)
Q Consensus 165 ~~l~~~~~l~gig~g~~~~~~~~~~ad~f~~~~~r~~~f~~~y~~~~iG~~i~p~v~~~l~~----------~~gw~~~F 234 (296)
+.+....++.++|.+...|...+++.++.|+ +.|+..++.++++..+|+.++..+.+.... ..++.+.|
T Consensus 383 ~~~~~~~~l~~~ge~~~~p~g~s~~~~~aP~-~~rg~~~g~~~l~~a~g~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~f 461 (500)
T PRK09584 383 NWLIASYGLQSIGELMISGLGLAMVAQLVPQ-RLMGFIMGSWFLTTAGAALIAGYVANLMAVPDNVTDPLMSLEVYGRVF 461 (500)
T ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHHHhCcH-HHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhhhhhHHHHH
Confidence 4677788899999999999999999999994 489999999888888887777666643221 11356677
Q ss_pred HHHHHHHHHHHHHHHhCCC
Q 045564 235 GLNIAANLAGVVIFLSGKH 253 (296)
Q Consensus 235 ~i~~~~~~~~~~~~~~~~~ 253 (296)
...++..++..++++...|
T Consensus 462 ~~~~~~~~~~a~~~~~~~~ 480 (500)
T PRK09584 462 LQIGIATAVIAVLMLLTAP 480 (500)
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 7666654433333433333
No 216
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=98.25 E-value=3.3e-05 Score=74.86 Aligned_cols=153 Identities=12% Similarity=0.120 Sum_probs=108.9
Q ss_pred HHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhh--cc--hHHHHHHHHHHHHHHHHHHHhhccccCCCCCc
Q 045564 73 NLMVYMIQEFHITSINSALISNIVNGFVNLFPVLGAIIADSF--LG--SFQVIWISSFISLLGTILLDSTATFDSLRPQR 148 (296)
Q Consensus 73 ~l~~yl~~~lg~s~~~a~~i~~~~~~~~~~~~l~~G~laDr~--iG--R~~~i~i~~~l~~ig~~~la~~~~~p~~~~~~ 148 (296)
....|+++++|+++++.....++...--.+ -++.|.++|.+ +| ||+-++++.++..++.+.+++. |...
T Consensus 11 ~~~~~l~~~l~ls~~~~~~~~~~~~lPw~~-Kp~~g~lsD~~pi~G~rr~~Y~~i~~~~~~~~~~~~~~~---~~~~--- 83 (433)
T PF03092_consen 11 AIYPFLKDDLGLSPAQLQRLSSLASLPWSI-KPLYGLLSDSFPIFGYRRKPYMIIGWLLGAVSALVLALL---PASE--- 83 (433)
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHhCchHH-hhhHHhhcccccccCCcchHHHHHHHHHHHHHHHHHHhc---cccc---
Confidence 344588999999999987776666655444 45679999994 35 4445566666665544444432 2210
Q ss_pred cCCCCcCcCCCCchhhHHHHHHHHHHHHhhchhhhhhhhhhhccCC-CccchhhHHHHHHHHHHHHHHHHHHHHHhhhcc
Q 045564 149 CDIGLSLCKAPSKVQFAVLYSGIALACLGLGGLRFTLATMGANQFE-IPQHQGIFFNWFFILTYASTVISSAAFVYIEDN 227 (296)
Q Consensus 149 c~~~~~~~~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~~~ad~f~-~~~~r~~~f~~~y~~~~iG~~i~p~v~~~l~~~ 227 (296)
.+.....+..++..+|........-++..|.-. ++..|+..-++.+....+|++++..+.|++.+.
T Consensus 84 -------------~s~~~~~~~l~la~~g~a~~DV~aDa~vvE~~~~~p~~~g~lqS~~~~~~~~G~lv~~~l~G~l~~~ 150 (433)
T PF03092_consen 84 -------------SSAAIAVVLLFLASFGYAFADVAADALVVELARREPESRGDLQSFVWGVRSVGSLVGSLLSGPLLDS 150 (433)
T ss_pred -------------chhhhHHHHHHHHHHHHHHHHHhhhHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHHHHhhhhhhhc
Confidence 122344455667788888888889999998876 233377888888889999999999999999999
Q ss_pred ccchhhHHHHHHHHHHHH
Q 045564 228 LSWRLGSGLNIAANLAGV 245 (296)
Q Consensus 228 ~gw~~~F~i~~~~~~~~~ 245 (296)
.++++.|.+.+++..+.+
T Consensus 151 ~~~~~~f~i~~~~~~l~~ 168 (433)
T PF03092_consen 151 FGPQGVFLISAALPLLML 168 (433)
T ss_pred CCCeEEehHHHHHHHHHH
Confidence 999999999877655544
No 217
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=98.22 E-value=1.8e-07 Score=92.89 Aligned_cols=189 Identities=14% Similarity=0.120 Sum_probs=2.9
Q ss_pred hHHHhHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhcchHHHHHHHHHHHHHHHHHHHhhccc-cCC
Q 045564 66 LGEGWVANLMVYMIQEFHITSINSALISNIVNGFVNLFPVLGAIIADSFLGSFQVIWISSFISLLGTILLDSTATF-DSL 144 (296)
Q Consensus 66 ~~y~~~~~l~~yl~~~lg~s~~~a~~i~~~~~~~~~~~~l~~G~laDr~iGR~~~i~i~~~l~~ig~~~la~~~~~-p~~ 144 (296)
..++......+-+++.++++.++++++.+.+-++..+..++..++++| --|-|-+-++.++..+|.++.+++.++ +.+
T Consensus 17 ~~~g~~~~~lttiErRF~l~S~~~G~i~s~~di~~~~~~~~vsy~g~~-~hrprwig~g~~~~~~g~~l~~lPhf~~~~y 95 (539)
T PF03137_consen 17 MVSGYVNSSLTTIERRFGLSSSQSGLISSSYDIGSLVVVLFVSYFGGR-GHRPRWIGIGALLMGLGSLLFALPHFLSGPY 95 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhh-cCCcceeeecHHHHHHHHHHHhccHhhcCCC
Confidence 444444555567888999999999999999999999999999999999 467778889999999999999887543 111
Q ss_pred CCC-----cc--CCCCcCc-------------------CCCCchhhHHHHHHHHHHHHhhchhhhhhhhhhhccCCCccc
Q 045564 145 RPQ-----RC--DIGLSLC-------------------KAPSKVQFAVLYSGIALACLGLGGLRFTLATMGANQFEIPQH 198 (296)
Q Consensus 145 ~~~-----~c--~~~~~~~-------------------~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~~~ad~f~~~~~ 198 (296)
... .| +....+| +.....-+.+++++.++.|+|.....+...+|+=|-.+++ .
T Consensus 96 ~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~gq~l~GiG~~pl~tLG~tYiDDnv~~~-~ 174 (539)
T PF03137_consen 96 SYEEASNSNGNSSISSNLCDSSSSSQASSDCQDCCSSSSSSLSGYFYVFILGQLLIGIGATPLYTLGITYIDDNVSKK-N 174 (539)
T ss_dssp --------------------------------------------------------SSS---------------------
T ss_pred ccccccccccccccccccccccccccccCccccccccccccchHHHHHHHHHHHHHhccccCCccceeeeeccccccc-c
Confidence 100 00 0001122 1111112456788899999999999999999999988743 4
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHhhhcc---------------------c-cchhhHHHHHHHHHHHHHHHHhCCCchh
Q 045564 199 QGIFFNWFFILTYASTVISSAAFVYIEDN---------------------L-SWRLGSGLNIAANLAGVVIFLSGKHFYF 256 (296)
Q Consensus 199 r~~~f~~~y~~~~iG~~i~p~v~~~l~~~---------------------~-gw~~~F~i~~~~~~~~~~~~~~~~~~~~ 256 (296)
-....++++.+..+|..+|.++++...+. . .|+.+|.+.+++.++..+.++.+.|+.+
T Consensus 175 splYiGi~~~~~~lGPa~Gf~lg~~~L~~yvD~~~~~~~~~~i~p~dp~WvGAWWLGfli~g~~~~l~aipl~~FPk~lp 254 (539)
T PF03137_consen 175 SPLYIGILYAMSILGPALGFLLGSFCLRIYVDFPKVPPDGVGITPSDPRWVGAWWLGFLICGILLFLSAIPLFFFPKKLP 254 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CccchhhhhHHhhccHHHHHHHHHHHHhceeCCccccccCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHcCCccCC
Confidence 55677888888888998888877755421 1 2888898888877666655544444443
No 218
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=98.16 E-value=2e-05 Score=80.06 Aligned_cols=189 Identities=15% Similarity=0.155 Sum_probs=138.7
Q ss_pred hHHHhHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhcchHHHHHHHHHHHHHHHHHHHhhccccCC-
Q 045564 66 LGEGWVANLMVYMIQEFHITSINSALISNIVNGFVNLFPVLGAIIADSFLGSFQVIWISSFISLLGTILLDSTATFDSL- 144 (296)
Q Consensus 66 ~~y~~~~~l~~yl~~~lg~s~~~a~~i~~~~~~~~~~~~l~~G~laDr~iGR~~~i~i~~~l~~ig~~~la~~~~~p~~- 144 (296)
.+.+......+-+.+.++++..+.+.+.+.+-++..+..++..+.+-| .-|-|.+-+|.++..+|.++.+++.++..-
T Consensus 111 l~~~y~~s~IttiErRF~i~Ss~sG~I~s~~dig~~l~i~fVsYfG~r-~HrPr~Ig~G~~~m~lgsll~alPHf~~~~y 189 (735)
T KOG3626|consen 111 LYVGYFNSVITTIERRFKISSSQSGLIASSYDIGNLLLIIFVSYFGSR-GHRPRWIGIGLVLMGLGSLLFALPHFFSGPY 189 (735)
T ss_pred hhhhhhhhhhhhhhhhcCCCCCcceeEeeecccchhhhhHhHHHhccc-cCccceeeechhHHHHHHHHHhChHHhcCcc
Confidence 444666777788889999999999999999999999999999999999 577788999999999999999887432100
Q ss_pred ------------CC----Cc--cCCCC-------cCcC---CCCchhhHHHHHHHHHHHHhhchhhhhhhhhhhccCCCc
Q 045564 145 ------------RP----QR--CDIGL-------SLCK---APSKVQFAVLYSGIALACLGLGGLRFTLATMGANQFEIP 196 (296)
Q Consensus 145 ------------~~----~~--c~~~~-------~~~~---~~~~~~~~~l~~~~~l~gig~g~~~~~~~~~~ad~f~~~ 196 (296)
.+ .. |++.+ ..+. .++..-+.+++++.++.|+|...+.+...+++=|-.. +
T Consensus 190 ~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llff~~q~l~GIG~Tpi~tlGisYiDDnvk-~ 268 (735)
T KOG3626|consen 190 EYELEVIKQSVENPSSSLSFCCCNKSTNLCRPSPENSKREKESTSYPFLLFFLGQLLLGIGATPIFTLGISYIDDNVK-K 268 (735)
T ss_pred hhhhhhhhccccCCccccchhhccCCccccCCCCCcccccccCCchhHHHHHHHHHHhhcCCCCCccCCCcccccccc-c
Confidence 00 00 11111 1111 1111123467888999999999999998898888665 3
Q ss_pred cchhhHHHHHHHHHHHHHHHHHHHHHhhhcc------------------c-cchhhHHHHHHHHHHHHHHHHhCCCchh
Q 045564 197 QHQGIFFNWFFILTYASTVISSAAFVYIEDN------------------L-SWRLGSGLNIAANLAGVVIFLSGKHFYF 256 (296)
Q Consensus 197 ~~r~~~f~~~y~~~~iG~~i~p~v~~~l~~~------------------~-gw~~~F~i~~~~~~~~~~~~~~~~~~~~ 256 (296)
+.-...+++++....+|.++|.+++++..+- . -|+.+|++.+++.++..+.++++.+..+
T Consensus 269 ~~SplYlgi~~~~~~lGPaiGfllgS~~l~lYvD~~~~~~~it~~DPrWIGAWWlGFLi~g~~~~~~a~p~f~fPk~lp 347 (735)
T KOG3626|consen 269 KNSPLYLGILYSMAILGPAIGFLLGSFCLKLYVDFGLSPIGITPTDPRWIGAWWLGFLICGALLLFSAVPLFFFPKELP 347 (735)
T ss_pred cCCcHHHHHHHHHHHhhhHHHHHHHHHHHHeeeccccCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHhCcccCc
Confidence 3456678888888889999999888877531 1 2888899999888777777766655554
No 219
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=98.12 E-value=5.9e-06 Score=78.11 Aligned_cols=149 Identities=11% Similarity=-0.036 Sum_probs=105.7
Q ss_pred hHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhcc--hHHHHHHHHHHHHHHHHHHHhhccccCCCCC
Q 045564 70 WVANLMVYMIQEFHITSINSALISNIVNGFVNLFPVLGAIIADSFLG--SFQVIWISSFISLLGTILLDSTATFDSLRPQ 147 (296)
Q Consensus 70 ~~~~l~~yl~~~lg~s~~~a~~i~~~~~~~~~~~~l~~G~laDr~iG--R~~~i~i~~~l~~ig~~~la~~~~~p~~~~~ 147 (296)
.-..++.++.+.+..+..+.+.+-.-..+...++..+.|.++|| +| |...-..+. .++|..... .|..
T Consensus 289 LePtlslwm~e~m~~p~w~~G~~fLp~~~~y~ig~~lfg~la~k-~~~~~wl~~~~gl--~~~G~~~~~----iP~~--- 358 (464)
T KOG3764|consen 289 LEPTLSLWMLETMFTPGWEVGLAFLPASLSYAIGTNLFGKLADK-YPHLRWLLSLGGL--ATVGVSSGP----IPFA--- 358 (464)
T ss_pred hCcccHHHHHHhccCCCcceeeeecccccchhccCchHHHHHHh-cCchhHHHHHHHH--HHHHHHhch----hHhh---
Confidence 34556778888888777788887777888899999999999999 69 533333333 333422222 2221
Q ss_pred ccCCCCcCcCCCCchhhHHHHHHHHHHHHhhchhhhhhhhhhhccCCCcc-----chhhHHHHHHHHHHHHHHHHHHHHH
Q 045564 148 RCDIGLSLCKAPSKVQFAVLYSGIALACLGLGGLRFTLATMGANQFEIPQ-----HQGIFFNWFFILTYASTVISSAAFV 222 (296)
Q Consensus 148 ~c~~~~~~~~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~~~ad~f~~~~-----~r~~~f~~~y~~~~iG~~i~p~v~~ 222 (296)
.+...+++-+...+++.+...+..-...+.+.+.|+ .-++.+++.-.+..+|..+||.++|
T Consensus 359 --------------~~~~~L~vp~~~l~~~i~~~dasl~P~l~~lvd~rh~s~~~vYGsVyaIad~a~sla~a~GP~~gg 424 (464)
T KOG3764|consen 359 --------------TSIAQLWVPNFGLGFGIGLADASLIPTLGYLVDPRHVSGFNVYGSVYAIADAAFSLAYAIGPTFGG 424 (464)
T ss_pred --------------hhHHHHhhhhHHHHHHHHHHHHHHhhhhHHhcchhhccccceeeeHHHHHHHHHHHhhhccccccc
Confidence 134456666677777777777777666777776332 4578888989999999999999999
Q ss_pred hhhccccchhhHHHHHHHHH
Q 045564 223 YIEDNLSWRLGSGLNIAANL 242 (296)
Q Consensus 223 ~l~~~~gw~~~F~i~~~~~~ 242 (296)
.+.+..|++|.-.+-++..+
T Consensus 425 ~iv~~iGF~wl~~iig~~n~ 444 (464)
T KOG3764|consen 425 SLVEAIGFEWLMTIIGILNL 444 (464)
T ss_pred hheeehhHHHHHHHHHHHHH
Confidence 99999999987665555433
No 220
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.12 E-value=3.6e-05 Score=75.78 Aligned_cols=151 Identities=13% Similarity=0.062 Sum_probs=92.2
Q ss_pred hHHHhHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhh---cchHHHHHHHHHHHH-HHHHHHHhhccc
Q 045564 66 LGEGWVANLMVYMIQEFHITSINSALISNIVNGFVNLFPVLGAIIADSF---LGSFQVIWISSFISL-LGTILLDSTATF 141 (296)
Q Consensus 66 ~~y~~~~~l~~yl~~~lg~s~~~a~~i~~~~~~~~~~~~l~~G~laDr~---iGR~~~i~i~~~l~~-ig~~~la~~~~~ 141 (296)
..|+...+++.|+++..|+|..++..+...+.++..++.+++|+++||. ..+|..+.....++. +|.+.+.....
T Consensus 288 v~~~~~~~lpl~l~~~~~~s~~~a~~ls~~~~~~g~v~~i~ag~lsdr~~~~~~~~~~~~~~~~~~~~~g~~~l~~~~~- 366 (495)
T KOG2533|consen 288 VNYGFSYWLPLYLKSNGGYSELQANLLSTPYDVGGIVGLILAGYLSDRLKTIFARRLLFIVFLCLYAIIGAISLLAAAV- 366 (495)
T ss_pred ccccHHHHHHHHHHcCCCcChHHhccccchHHhhhHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHhhcc-
Confidence 7788889999999997789999999999999999999999999999993 345555544444333 33333322210
Q ss_pred cCCCCCccCCCCcCcCCCCchhhHHHHHHHHHHHHhhchhhhhhhhhhhccCCCccchhhHHHHHHHHHHHHHHHHHHH-
Q 045564 142 DSLRPQRCDIGLSLCKAPSKVQFAVLYSGIALACLGLGGLRFTLATMGANQFEIPQHQGIFFNWFFILTYASTVISSAA- 220 (296)
Q Consensus 142 p~~~~~~c~~~~~~~~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~~~ad~f~~~~~r~~~f~~~y~~~~iG~~i~p~v- 220 (296)
......+.+....+.+...++......+......+|-+..+.+..+.+.+++++|.+
T Consensus 367 ----------------------~~~~~~~~~~~~~~~~~~~~~~~~w~s~~~~g~~k~~~~~~~~i~~~~s~~~~~~~~~ 424 (495)
T KOG2533|consen 367 ----------------------LPGAYGAFLIGPYGLIATAIIALSWTSANLAGNTKALTTVSAIIDGTGSAGAISGQLF 424 (495)
T ss_pred ----------------------chHHhHHHHhcchhhHHHHHHHHhhccccccchHHhHHHHhhhhcchhHHHHhhhhhc
Confidence 011111112222233333344444444444434445556665666666665555543
Q ss_pred HHhhhccccchhhHHHHHH
Q 045564 221 FVYIEDNLSWRLGSGLNIA 239 (296)
Q Consensus 221 ~~~l~~~~gw~~~F~i~~~ 239 (296)
.+.....++|.+.|.+...
T Consensus 425 ~~~~ap~y~~~~~f~~~~~ 443 (495)
T KOG2533|consen 425 RSLDAPRYGWGAVFYMLVA 443 (495)
T ss_pred ccccCcchhhhhHHHHHHH
Confidence 4555556788888855444
No 221
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=98.11 E-value=0.00021 Score=68.71 Aligned_cols=156 Identities=12% Similarity=0.008 Sum_probs=102.7
Q ss_pred cCCchhHHHHHHHHH-H-------hHHHhHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhcchHHHH
Q 045564 50 RGGRTALLSRTVTCL-T-------LGEGWVANLMVYMIQEFHITSINSALISNIVNGFVNLFPVLGAIIADSFLGSFQVI 121 (296)
Q Consensus 50 ~~~~~~~~~l~~~~~-~-------~~y~~~~~l~~yl~~~lg~s~~~a~~i~~~~~~~~~~~~l~~G~laDr~iGR~~~i 121 (296)
|-++|.++.+....+ + ..|+.+. .|..+.+| +...+.|...+|...+....+.+-|+.|+ +|-|.+.
T Consensus 38 rVy~rRW~vLl~~slL~~SN~~qWI~ya~i~---n~~~~~Yg-s~~~~~wlsmIym~v~vp~gf~~mw~ldk-~GLR~a~ 112 (480)
T KOG2563|consen 38 RVYPRRWVVLLAFSLLNFSNGMQWIQYAPIN---NYVNSFYG-SSSAADWLSMIYMVVSVPFGFAAMWILDK-FGLRTAL 112 (480)
T ss_pred ccchhHhHHHHHHHHHHhcCcchheeehhHH---HHHHHHhc-chHHHHHHHHHHHHHHHHHhhHHHHhhcc-cchHHHH
Confidence 345566555555444 2 2343333 37777777 66777889999999999999999999999 7999999
Q ss_pred HHHHHHHHHHHHHHHhhccccCCCCCccCCCCcCcCCCCchhhHHHHHHHHHHHHhhchhhhhhhhhh-hccCCCccchh
Q 045564 122 WISSFISLLGTILLDSTATFDSLRPQRCDIGLSLCKAPSKVQFAVLYSGIALACLGLGGLRFTLATMG-ANQFEIPQHQG 200 (296)
Q Consensus 122 ~i~~~l~~ig~~~la~~~~~p~~~~~~c~~~~~~~~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~~~-ad~f~~~~~r~ 200 (296)
+++.++-.+|..+=.++. .|...+ ..-..+...|..+.+...-.... .|+-+ +-+|+++ +|.
T Consensus 113 llgt~ln~iGa~Ir~iss-~p~v~~--------------~f~~~l~~~Gq~iaa~Aq~Fim~-lPskiA~~WF~~~-qra 175 (480)
T KOG2563|consen 113 LLGTVLNGIGAWIRLISS-LPFVPP--------------LFRRPLTHTGQSIAAAAQPFILG-LPSKIAAVWFPPD-QRA 175 (480)
T ss_pred HHHHHHHHHHHHHhhhcc-Cccccc--------------cchhhhhHHhHHHHHHhhhHhhc-cccHHHHhhCCcc-hhh
Confidence 999999999998877765 343211 00112455565555554443332 33333 3455544 677
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhhcc
Q 045564 201 IFFNWFFILTYASTVISSAAFVYIEDN 227 (296)
Q Consensus 201 ~~f~~~y~~~~iG~~i~p~v~~~l~~~ 227 (296)
++-..--+++.+|..++.++...+..+
T Consensus 176 ~A~~~~v~~n~LGvavg~llppilV~~ 202 (480)
T KOG2563|consen 176 IATVLGVMGNPLGVAVGFLLPPILVPS 202 (480)
T ss_pred hhhhHHHhcchHHHHHHhhccceecCC
Confidence 777776667778877777766666544
No 222
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=98.11 E-value=0.00015 Score=71.37 Aligned_cols=175 Identities=14% Similarity=0.038 Sum_probs=109.9
Q ss_pred hHHHhHHHHHHHHHHHhCCChh----HHHHHHHHHHHHHHHHHHHHHHHhhhhcchHH-------HHHHHHHHHHHHHHH
Q 045564 66 LGEGWVANLMVYMIQEFHITSI----NSALISNIVNGFVNLFPVLGAIIADSFLGSFQ-------VIWISSFISLLGTIL 134 (296)
Q Consensus 66 ~~y~~~~~l~~yl~~~lg~s~~----~a~~i~~~~~~~~~~~~l~~G~laDr~iGR~~-------~i~i~~~l~~ig~~~ 134 (296)
.+......++.|..+..+.+.. ...++.++..+...+..++.|++.|| +|||+ -+.+|.++..++.+.
T Consensus 284 ~~~q~~~~l~l~~~~~~~~~~~G~~i~~~~~~~~n~~~iii~~pl~~~l~~r-l~~r~~~~~~~~k~~~G~~l~~~~~~~ 362 (489)
T PRK10207 284 LYAQMPTSLNFFAINNVHHEILGFSINPVSFQALNPFWVVVASPILAGIYTH-LGSKGKDLSMPMKFTLGMFLCSLGFLT 362 (489)
T ss_pred HHHHcccHHHHHHHHhccccccceEECHHHHHhHhHHHHHHHHHHHHHHHHH-HhhCCCCCCcHHHHHHHHHHHHHHHHH
Confidence 4444446677777654333211 23445555556676777778999999 79887 377788887777665
Q ss_pred HHhhccccCCCCCccCCCCcCcCCCCchhhHHHHHHHHHHHHhhchhhhhhhhhhhccCCCccchhhHHHHHHHHHHHHH
Q 045564 135 LDSTATFDSLRPQRCDIGLSLCKAPSKVQFAVLYSGIALACLGLGGLRFTLATMGANQFEIPQHQGIFFNWFFILTYAST 214 (296)
Q Consensus 135 la~~~~~p~~~~~~c~~~~~~~~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~~~ad~f~~~~~r~~~f~~~y~~~~iG~ 214 (296)
++.... .+.. .. . ..+.+.+....++.++|.+...+...+++.+..|+ +.++.+.+.+++..++|.
T Consensus 363 ~~~~~~--~~~~--------~~-~--~~s~~~~i~~~~l~g~Ge~~~~~~g~~~~~~~aP~-~~~g~~~g~~~l~~~ig~ 428 (489)
T PRK10207 363 AAAAGM--WFAD--------AQ-G--LTSPWFIVLVYLFQSLGELFISALGLAMIAALVPQ-HLMGFILGMWFLTQAAAF 428 (489)
T ss_pred HHHHHH--hhcC--------CC-C--ccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhChH-HHHHHHHHHHHHHHHHHH
Confidence 543210 0000 00 0 11334455667889999999999999999999994 478889999999999999
Q ss_pred HHHHHHHHhhhc----------cccchhhHHHHHHHHHHHHHHHHhCCCch
Q 045564 215 VISSAAFVYIED----------NLSWRLGSGLNIAANLAGVVIFLSGKHFY 255 (296)
Q Consensus 215 ~i~p~v~~~l~~----------~~gw~~~F~i~~~~~~~~~~~~~~~~~~~ 255 (296)
.+|..++.+... ...+.+.|...++..++..++++...|+.
T Consensus 429 ~lg~~l~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~v~~~~~~~~~ 479 (489)
T PRK10207 429 LLGGYVATFTAVPDNITDPLETLPVYTNVFGKIGLVTLGVAVVMALMVPWL 479 (489)
T ss_pred HHHHHHHHHhccccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 998887765521 11234556655554444444444434433
No 223
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=98.09 E-value=1.7e-08 Score=97.02 Aligned_cols=161 Identities=14% Similarity=0.070 Sum_probs=95.7
Q ss_pred hHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhcchHHHHHHHHHHHHHHHHHHHhhccccCCCCCcc
Q 045564 70 WVANLMVYMIQEFHITSINSALISNIVNGFVNLFPVLGAIIADSFLGSFQVIWISSFISLLGTILLDSTATFDSLRPQRC 149 (296)
Q Consensus 70 ~~~~l~~yl~~~lg~s~~~a~~i~~~~~~~~~~~~l~~G~laDr~iGR~~~i~i~~~l~~ig~~~la~~~~~p~~~~~~c 149 (296)
...+..+++.+..+.+.. ........+...++.+++.++.|| +|||+.++++.++..++.+.+.... .+..
T Consensus 271 ~~~~~~~~i~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~-~GRr~~~i~~~~~~~~~~~~~~~~~-~~~~----- 341 (451)
T PF00083_consen 271 FIFYYSPSIFENAGISNS--FLATLILGLVNFLGTLLAIFLIDR-FGRRKLLIIGLLLMAICSLILGIIF-FLGV----- 341 (451)
T ss_pred cccccccccccccccccc--cccccccccccccccccccccccc-ccccccccccccccccccccccccc-cccc-----
Confidence 344444455566676666 223334445566777788899999 7999999998887776555443100 0000
Q ss_pred CCCCcCcCCCCchhhHHHHHHHHHHHHhhc-hhhhhhhhhhhccCCCccchhhHHHHHHHHHHHHHHHHHHHHHhhhccc
Q 045564 150 DIGLSLCKAPSKVQFAVLYSGIALACLGLG-GLRFTLATMGANQFEIPQHQGIFFNWFFILTYASTVISSAAFVYIEDNL 228 (296)
Q Consensus 150 ~~~~~~~~~~~~~~~~~l~~~~~l~gig~g-~~~~~~~~~~ad~f~~~~~r~~~f~~~y~~~~iG~~i~p~v~~~l~~~~ 228 (296)
+.+...+.. .++...+...+.+ +..+....+.+|+||++ .|.++.++.+....+++.++|.+..++.+..
T Consensus 342 -------~~~~~~~~~-~i~~~~l~~~~~~~g~~~~~~~~~~ElfPt~-~R~~~~~~~~~~~~i~~~i~~~~~~~~~~~~ 412 (451)
T PF00083_consen 342 -------SSSSWWSIL-SIVFLALFFAFFSLGWGPLPWIYTAELFPTK-VRSTGIGLSYAVGRIGGFIIPFLFPYLFNNL 412 (451)
T ss_pred -------ccccccccc-cceeeeecccccccccccccccccccccccc-ccccccccccccccccccccccccccccccc
Confidence 000000111 1111112212222 34456668889999955 7899999888888889999998888888776
Q ss_pred cchhhHHHHHHHHHHHHHHH
Q 045564 229 SWRLGSGLNIAANLAGVVIF 248 (296)
Q Consensus 229 gw~~~F~i~~~~~~~~~~~~ 248 (296)
+-...|.+.++++++..++.
T Consensus 413 ~~~~~~~i~~~~~~i~~i~~ 432 (451)
T PF00083_consen 413 GGWGVFLIFAGVCLIAIIFV 432 (451)
T ss_pred cccccchhhHHHHHHHHhhe
Confidence 63445666555554544443
No 224
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=97.98 E-value=7.2e-05 Score=73.14 Aligned_cols=145 Identities=8% Similarity=-0.153 Sum_probs=106.6
Q ss_pred HHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhcchHHHHHHHHHHHHHHHHHHHhhccccCCCCCccCCCCcCcCC
Q 045564 79 IQEFHITSINSALISNIVNGFVNLFPVLGAIIADSFLGSFQVIWISSFISLLGTILLDSTATFDSLRPQRCDIGLSLCKA 158 (296)
Q Consensus 79 ~~~lg~s~~~a~~i~~~~~~~~~~~~l~~G~laDr~iGR~~~i~i~~~l~~ig~~~la~~~~~p~~~~~~c~~~~~~~~~ 158 (296)
.+.+|.++.+.+.+.....++..++..+.+.+.+| +|.|+++.++.++..++.+...+...-.... ...
T Consensus 280 ~~~lG~s~~~~G~~~~~~~v~~i~g~~~~~~~~~~-~~~r~~l~~~~~l~~~~~~~~~~l~~~~~~~----------~gi 348 (468)
T TIGR00788 280 TQCLPGGPSFSGMSKVVGNLGSLCGVGGYDRFLKT-FPYRLLFGVTTLLYTLSSLFDLILVKRWNLA----------FGI 348 (468)
T ss_pred cccCCCCcchhhhHHHHHHHHHHHHHHHHHHHHhh-CCHHHHHHHHHHHHHHHHhCceeeeeccccc----------cCC
Confidence 35689999999999999999999999999999999 7999999999998887664432111000000 000
Q ss_pred CCchhhHHHHHHHHHHHHhhchhhhhhhhhhhccCCCccchhhHHHHHHHHHHHHHHHHHHHHHhhhcccc-----chhh
Q 045564 159 PSKVQFAVLYSGIALACLGLGGLRFTLATMGANQFEIPQHQGIFFNWFFILTYASTVISSAAFVYIEDNLS-----WRLG 233 (296)
Q Consensus 159 ~~~~~~~~l~~~~~l~gig~g~~~~~~~~~~ad~f~~~~~r~~~f~~~y~~~~iG~~i~p~v~~~l~~~~g-----w~~~ 233 (296)
+ .....+...++.+++.+........++.+..|+ +.+++.++++....|+|..+++.+++++.+..| ++..
T Consensus 349 ~---~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p~-~~egt~~al~~s~~~lg~~v~~~~gg~l~~~~g~~~~~~~~~ 424 (468)
T TIGR00788 349 S---DEVFVLGDSIIAEVLAQLKFMPFLVLLARLCPS-GCESSVFALLASILHLGSSVSGFLGVLLMETIGITCDNSNNL 424 (468)
T ss_pred C---CeeeeeehhHHHHHHHHHHHccHHHHHHHhCCC-CceehHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccccch
Confidence 0 112333445677778887778889999999984 478999999999999999999999999988776 5544
Q ss_pred HHHHH
Q 045564 234 SGLNI 238 (296)
Q Consensus 234 F~i~~ 238 (296)
+.+-.
T Consensus 425 ~~~i~ 429 (468)
T TIGR00788 425 WLLIL 429 (468)
T ss_pred HHHHH
Confidence 44333
No 225
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=97.97 E-value=0.0013 Score=63.13 Aligned_cols=100 Identities=15% Similarity=0.131 Sum_probs=69.1
Q ss_pred HHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhcchHHHHHHHHHHHHHHHHHHHhhccccCCCCCccC
Q 045564 71 VANLMVYMIQEFHITSINSALISNIVNGFVNLFPVLGAIIADSFLGSFQVIWISSFISLLGTILLDSTATFDSLRPQRCD 150 (296)
Q Consensus 71 ~~~l~~yl~~~lg~s~~~a~~i~~~~~~~~~~~~l~~G~laDr~iGR~~~i~i~~~l~~ig~~~la~~~~~p~~~~~~c~ 150 (296)
..+++.|+++ .|+|..|.+.+.++..+...+++++.|+++||...+||.+.+..++..+.........
T Consensus 22 ~p~~~~~L~~-~G~s~~qIG~l~a~~~~~~i~~~~~~g~~aDr~~~~~~~l~~~~l~~~~~~~~~~~~~----------- 89 (400)
T PF03825_consen 22 LPYLPLYLES-RGFSGTQIGILLAVGPLARIVSPPFWGAIADRFGSAKRILALLSLLSALALLLLAFSS----------- 89 (400)
T ss_pred HHHHHHHHHh-CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhHHHHHHHHHHHHHHHHHHHHHhc-----------
Confidence 4677888865 6799999999999999999999999999999954467777776666555332222111
Q ss_pred CCCcCcCCCCchhhHHHHHHHHHHHHhhchhhhhhhhhhhccCC
Q 045564 151 IGLSLCKAPSKVQFAVLYSGIALACLGLGGLRFTLATMGANQFE 194 (296)
Q Consensus 151 ~~~~~~~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~~~ad~f~ 194 (296)
+.+.+++..++..+......|...++.-+...
T Consensus 90 ------------~f~~~~~~~~l~~~~~~p~~pl~dsi~~~~~~ 121 (400)
T PF03825_consen 90 ------------SFWWLFVIMLLFSFFFSPTMPLSDSIALSYLG 121 (400)
T ss_pred ------------cHHHHHHHHHHHHHHHccHHHHHHHHHHHHcc
Confidence 23344555556666666666666665555443
No 226
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=97.90 E-value=0.00028 Score=68.96 Aligned_cols=151 Identities=16% Similarity=0.092 Sum_probs=105.0
Q ss_pred hHHHHHHHHHHHhCCChhHH-HHHHH----HHHHHHHHHHHHHHHHhhhhcchHHHHHHHHHHHHHHHHHHHhhccccCC
Q 045564 70 WVANLMVYMIQEFHITSINS-ALISN----IVNGFVNLFPVLGAIIADSFLGSFQVIWISSFISLLGTILLDSTATFDSL 144 (296)
Q Consensus 70 ~~~~l~~yl~~~lg~s~~~a-~~i~~----~~~~~~~~~~l~~G~laDr~iGR~~~i~i~~~l~~ig~~~la~~~~~p~~ 144 (296)
...+...+.....+.+.... ..... .......+..++-|.++|| +|||..+.+..+...+..+.+.+..
T Consensus 40 ~~~~~~~~~~ct~~~~~~~~~~~~~~~~~~~~~~~~~i~s~~iG~lSD~-~grk~~L~~~~~~~~l~~~~~~~~~----- 113 (463)
T KOG2816|consen 40 VMTNVILYLACTFGDDYQLENGLLLGVKQVTAGLLTLISSPLIGALSDR-YGRKVVLLLPLFGTILPALCLLFQG----- 113 (463)
T ss_pred chhhhhhhhhcccccCccchhhhhhhHHHHhhHHHHHHHHhhhHHhhhh-hhhhhhHHHHHHHHHHhHHHHHHHH-----
Confidence 44555556655555443322 22222 2356778888899999999 6999999998887766544443321
Q ss_pred CCCccCCCCcCcCCCCchhhHHHHHHHHHHHH--hhchhhhhhhhhhhccCCCccchhhHHHHHHHHHHHHHHHHHHHHH
Q 045564 145 RPQRCDIGLSLCKAPSKVQFAVLYSGIALACL--GLGGLRFTLATMGANQFEIPQHQGIFFNWFFILTYASTVISSAAFV 222 (296)
Q Consensus 145 ~~~~c~~~~~~~~~~~~~~~~~l~~~~~l~gi--g~g~~~~~~~~~~ad~f~~~~~r~~~f~~~y~~~~iG~~i~p~v~~ 222 (296)
.+.++ +.++ +.+...+...++++|...++ .|...+++.+-+...+..++|..++
T Consensus 114 -------------------~~~~~----~~~l~g~~~~~~s~~~a~vadis~~~-~R~~~~gll~~~~~~~~~~~p~~~~ 169 (463)
T KOG2816|consen 114 -------------------YWFFL----LLGLSGGFSAIFSVGFAYVADISSEE-ERSSSIGLLSGTFGAGLVIGPALGG 169 (463)
T ss_pred -------------------HHHhh----hcccccchhhhhhhhhhheeeccchh-HHHHHHHHHHHHHHHHHhHHHHHHH
Confidence 11111 3332 34456677888899988744 7888999888778888999999999
Q ss_pred hhhccccchhhHHHHHHHHHHHHHHHHh
Q 045564 223 YIEDNLSWRLGSGLNIAANLAGVVIFLS 250 (296)
Q Consensus 223 ~l~~~~gw~~~F~i~~~~~~~~~~~~~~ 250 (296)
++.+..|.-..|.++.+..+++.+..+.
T Consensus 170 ~~~~~~~~a~~f~ia~~~~~~~~~y~~~ 197 (463)
T KOG2816|consen 170 YLVKFLGIALVFLIAAASGILSLLYMLL 197 (463)
T ss_pred HHHHhcCchHHHHHHHHHHHHHHHHHhh
Confidence 9999999999999999987777765443
No 227
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=97.89 E-value=2e-05 Score=75.79 Aligned_cols=180 Identities=17% Similarity=0.097 Sum_probs=112.8
Q ss_pred hhHHHHHHHHH--H-hHHHhHHHHHHHHHHHhCCChhHHHH--------HHHHHHHHHHH-HHHHHHHHhhhhcchHHHH
Q 045564 54 TALLSRTVTCL--T-LGEGWVANLMVYMIQEFHITSINSAL--------ISNIVNGFVNL-FPVLGAIIADSFLGSFQVI 121 (296)
Q Consensus 54 ~~~~~l~~~~~--~-~~y~~~~~l~~yl~~~lg~s~~~a~~--------i~~~~~~~~~~-~~l~~G~laDr~iGR~~~i 121 (296)
|.++...+..+ - ++|+...+...-+. ..|..+.+... ...+......+ +..++.++.|+ +|||+..
T Consensus 304 ~~Llgt~~~WFllDiafy~~nL~~s~I~~-~ig~~~~~~~~~~~~~vA~~~~iia~~~~vPGyw~tv~~id~-iGRk~iq 381 (538)
T KOG0252|consen 304 KHLLGTAGTWFLLDIAFYGQNLFQSVIFS-AIGVIPSANTYHELFKVAEGNLIIAVCSTVPGYWFTVYFIDI-IGRKYIQ 381 (538)
T ss_pred HHHHHHHHHHHhhhhhhhccccHHHHHHH-hhccCCCcchHHHHHHHHHHHHHHHHHccCCceeEEEEEeeh-hhhHHHH
Confidence 44444444444 4 78877666655554 34443322211 12222222222 45566777999 8999999
Q ss_pred HHHHHHHHHHHHHHHhhccccCCCCCccCCCCcCcCCCCchhhHHHHHHHHHHHHhhchhhhhhhhhhhccCCCccchhh
Q 045564 122 WISSFISLLGTILLDSTATFDSLRPQRCDIGLSLCKAPSKVQFAVLYSGIALACLGLGGLRFTLATMGANQFEIPQHQGI 201 (296)
Q Consensus 122 ~i~~~l~~ig~~~la~~~~~p~~~~~~c~~~~~~~~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~~~ad~f~~~~~r~~ 201 (296)
+-+.+++.+..+.++.+- . +. .+......++.. ..-++.-+..+.....-+|.||.| .|+.
T Consensus 382 ~~GF~~~~i~~~~~~~~y---~----------~~---~~~~Gf~v~y~l--~~ff~NFGPn~ttfivpaE~FPar-vR~t 442 (538)
T KOG0252|consen 382 LMGFFIMTIFFFVIAGPY---N----------QL---ENTIGFVVLYSL--TFFFGNFGPNATTFIVPAEIFPAR-VRST 442 (538)
T ss_pred HhhHHHHHHHHHHHcCCc---c----------cc---cccCceeehHHH--HHHHHhcCCCceeEEeehhhchHH-Hhhh
Confidence 999998887666555431 1 00 011111222221 122333345556666678999966 7999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhc-----cccchhhHHHHHHHHHHHHHHHHhCCCc
Q 045564 202 FFNWFFILTYASTVISSAAFVYIED-----NLSWRLGSGLNIAANLAGVVIFLSGKHF 254 (296)
Q Consensus 202 ~f~~~y~~~~iG~~i~p~v~~~l~~-----~~gw~~~F~i~~~~~~~~~~~~~~~~~~ 254 (296)
..++...+.-+|++++...-.++++ ..|.++.|++.+.++.++.++.+...++
T Consensus 443 ~hGIsAA~GK~GAivg~~~F~~~t~~~yp~~~g~~~v~~i~~~~~~~gi~~T~l~pEt 500 (538)
T KOG0252|consen 443 CHGISAASGKAGAIVGAFGFLYLTDHNYPPNIGVRNVFIILAGCMLLGILFTLLIPET 500 (538)
T ss_pred hhhHHHHhccchHHHHHHHhhHhhhccCCccccchHHHHHHHHHHHHhHheeEEeecc
Confidence 9999888888999999999999998 7789999999999998888764443343
No 228
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=97.86 E-value=0.00055 Score=65.25 Aligned_cols=142 Identities=15% Similarity=0.127 Sum_probs=94.5
Q ss_pred HHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhcc-----hHHH-HHHHHHHHHHHHHHHHhhccccCCCCCccCC
Q 045564 78 MIQEFHITSINSALISNIVNGFVNLFPVLGAIIADSFLG-----SFQV-IWISSFISLLGTILLDSTATFDSLRPQRCDI 151 (296)
Q Consensus 78 l~~~lg~s~~~a~~i~~~~~~~~~~~~l~~G~laDr~iG-----R~~~-i~i~~~l~~ig~~~la~~~~~p~~~~~~c~~ 151 (296)
+..|++++..-.+.++.+-..... .-+..|+.||+ -+ ||.- +..|.++...|..+...+.. .+.. .
T Consensus 6 MIvEL~vpA~lv~~lval~~~~ap-~R~~~G~~SD~-~~s~~G~rRtPyI~~G~~~~~~g~~~ap~a~~--~l~~----~ 77 (403)
T PF03209_consen 6 MIVELGVPAWLVALLVALHYLVAP-LRVWFGHRSDT-HPSILGWRRTPYIWGGTLLQAGGLAIAPFALL--LLAE----S 77 (403)
T ss_pred HHHHhccHHHHHHHHHHHHHHHHH-HHHHhcccccc-CcccCcCCchhhhHHHHHHHHHHHHHHHHHHH--HHcc----c
Confidence 456888888888877777765544 57778999999 46 5544 44555666665555554431 1100 0
Q ss_pred CCcCcCCCCchhhHHHHHHHHHHHHhhchhhhhhhhhhhccCCCccchhhHHHHHHHHHHHHHHHHHHHHHhhhcccc
Q 045564 152 GLSLCKAPSKVQFAVLYSGIALACLGLGGLRFTLATMGANQFEIPQHQGIFFNWFFILTYASTVISSAAFVYIEDNLS 229 (296)
Q Consensus 152 ~~~~~~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~~~ad~f~~~~~r~~~f~~~y~~~~iG~~i~p~v~~~l~~~~g 229 (296)
.... +.+...........-.+.|+|.+....+..++.+|..|++ +|.+..++.|...-+|.+++..+.+.+.+.++
T Consensus 78 ~~~~-~~~~~~g~~~a~l~F~l~G~G~~~s~T~~lALl~D~~~e~-~R~~~v~ivw~Mli~G~iv~ai~~g~lL~~~s 153 (403)
T PF03209_consen 78 GQQS-SGPFWLGLALAALAFLLYGLGVHASGTSFLALLADLAPEE-RRPRVVAIVWVMLIVGIIVSAIVFGRLLDPFS 153 (403)
T ss_pred cccc-ccccHHHHHHHHHHHHHHHhhHhHhHHHHHHHHHhcCCHh-hhhhhHHHHHHHHHHHHHHHHHHHHHHccccC
Confidence 0000 1111112223334455678888888899999999999954 78999999888888999999999998887665
No 229
>PF12832 MFS_1_like: MFS_1 like family
Probab=97.81 E-value=0.00018 Score=52.78 Aligned_cols=56 Identities=23% Similarity=0.317 Sum_probs=48.2
Q ss_pred hHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhcchHHHHHHHHHH
Q 045564 70 WVANLMVYMIQEFHITSINSALISNIVNGFVNLFPVLGAIIADSFLGSFQVIWISSFI 127 (296)
Q Consensus 70 ~~~~l~~yl~~~lg~s~~~a~~i~~~~~~~~~~~~l~~G~laDr~iGR~~~i~i~~~l 127 (296)
...+++.|+. +.|++..+.+.+.++......+++++.|+++|| +||+|.+.....+
T Consensus 19 ~~Pfl~~~~~-~~Gl~~~~iGil~~i~~~~~~~~~pl~g~laDk-~~~~~~~l~~~~~ 74 (77)
T PF12832_consen 19 LYPFLPLYLK-QLGLSPSQIGILSAIRPLIRFLAPPLWGFLADK-FGKRKVILLGSLF 74 (77)
T ss_pred HHhhhhHhhh-hcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HCccHHHHHHHHH
Confidence 4567777876 589999999999999999999999999999999 6988877765543
No 230
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=97.77 E-value=0.0016 Score=64.28 Aligned_cols=122 Identities=9% Similarity=-0.039 Sum_probs=70.4
Q ss_pred hHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhcchHHHHHHHHHHHHHHHHHHHhhccccCCCCCcc
Q 045564 70 WVANLMVYMIQEFHITSINSALISNIVNGFVNLFPVLGAIIADSFLGSFQVIWISSFISLLGTILLDSTATFDSLRPQRC 149 (296)
Q Consensus 70 ~~~~l~~yl~~~lg~s~~~a~~i~~~~~~~~~~~~l~~G~laDr~iGR~~~i~i~~~l~~ig~~~la~~~~~p~~~~~~c 149 (296)
+..+.+.. -+..|.+... .....+..+...++..++.++.|| +|||+.++.+.+...++.++++.........
T Consensus 314 ~~~Y~~~i-f~~~g~~~~~-~~~~~~~~~v~~~~t~~~~~lvd~-~gRr~lll~s~~~m~~~~~~~~~~~~~~~~~---- 386 (513)
T KOG0254|consen 314 VFYYSTTI-FKSAGLKSDT-FLASIILGVVNFLGTLVATYLVDR-FGRRKLLLFGAAGMSICLVILAVVGVFALYY---- 386 (513)
T ss_pred EEeehHHH-HHhcCCCCch-HHHHHHHHHHHHHHHHHHHHHHHH-hccHHHHHHhHHHHHHHHHHHHHHHHHhccC----
Confidence 33344444 3455655433 555666667777888888999999 7999999999999999998887653111000
Q ss_pred CCCCcCcCCCCchhhHHHHHHHHHHHHhhchhhhhhhhhhhccCCCccchhhHHHH
Q 045564 150 DIGLSLCKAPSKVQFAVLYSGIALACLGLGGLRFTLATMGANQFEIPQHQGIFFNW 205 (296)
Q Consensus 150 ~~~~~~~~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~~~ad~f~~~~~r~~~f~~ 205 (296)
..+.. ......+....+.......+..+....+.+|.||.+ .|..+.++
T Consensus 387 ----~~~~~--~~~~~~~~~~~~~v~~f~~g~g~v~w~~~sEifp~~-~r~~~~s~ 435 (513)
T KOG0254|consen 387 ----PNSSK--GAGWLAIVFLCLFIFSFAIGWGPVPWVIVSEIFPLR-LRSKGASL 435 (513)
T ss_pred ----CCccc--chhHHHHHHHHHHHHHHhcccccchhhhhhccCcHh-HHhhhHHH
Confidence 00000 011111111122222222233444556889999954 67777665
No 231
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=97.76 E-value=0.0027 Score=62.37 Aligned_cols=202 Identities=9% Similarity=-0.116 Sum_probs=128.8
Q ss_pred ccCCchhHHHHHHHHH--H-hHHHhHHHHHHHHHHH-hCCCh------hH----HHHHHHHHHHHHHHHHHHHHHHhhhh
Q 045564 49 KRGGRTALLSRTVTCL--T-LGEGWVANLMVYMIQE-FHITS------IN----SALISNIVNGFVNLFPVLGAIIADSF 114 (296)
Q Consensus 49 ~~~~~~~~~~l~~~~~--~-~~y~~~~~l~~yl~~~-lg~s~------~~----a~~i~~~~~~~~~~~~l~~G~laDr~ 114 (296)
.+.-||.+..++.+.+ - +.+....+...|+.++ +|-++ .+ ..+...++.+...+.+++--++.++
T Consensus 253 ~~~mP~~m~~l~~vqffsW~a~f~~~~y~T~~vg~~v~~~~~~~~~~y~~gvr~G~~~l~~~s~~~~i~s~~l~~l~~~- 331 (477)
T TIGR01301 253 FKYLPRPVWILLLVTCLNWIAWFPFILFDTDWMGREVYGGSVNQGAKYDDGVRAGAFGLMLNSVVLGITSIGMEKLCRG- 331 (477)
T ss_pred HHHCCHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHcCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-
Confidence 5567888888888888 3 6776677777777643 44322 11 2234445555556666677888999
Q ss_pred cch-HHHHHHHHHHHHHHHHHHHhhccccC-CCCCccCCCCcCcCCCCchhhHHHHHHHHHHHHhhchhhhhhhhhhhcc
Q 045564 115 LGS-FQVIWISSFISLLGTILLDSTATFDS-LRPQRCDIGLSLCKAPSKVQFAVLYSGIALACLGLGGLRFTLATMGANQ 192 (296)
Q Consensus 115 iGR-~~~i~i~~~l~~ig~~~la~~~~~p~-~~~~~c~~~~~~~~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~~~ad~ 192 (296)
+|+ |++..++.++..+|++...+....+. ... .+.+...-.++.......++...+.|+..+.....-++++++.
T Consensus 332 ~g~~k~~~~~s~~~~~~~l~~~~~i~~~~~~~~~---~~~~~~~~~~~~~~~~~~l~~~~~~Gi~~A~~~siPfal~s~~ 408 (477)
T TIGR01301 332 WGAGKRLWGIVNIILAICLAATVLVTYVAKNSRY---YDGDGESLPPPTGIKASALIVFAILGIPLAITYSIPFALASIR 408 (477)
T ss_pred hccchhHHHHHHHHHHHHHHHHHHHHhhhhcccc---ccccccccCcchhhHHHHHHHHHHhhHHHHHHHHHhHHHHHHH
Confidence 785 67778888888888777654321110 000 0000000011111134555666788899998888889999998
Q ss_pred CCC-ccchhhHHHHHHHHHHHHHHHHHHHHHhhhcccc--chhhHHHHHHHHHHHHHHHHhCCCc
Q 045564 193 FEI-PQHQGIFFNWFFILTYASTVISSAAFVYIEDNLS--WRLGSGLNIAANLAGVVIFLSGKHF 254 (296)
Q Consensus 193 f~~-~~~r~~~f~~~y~~~~iG~~i~p~v~~~l~~~~g--w~~~F~i~~~~~~~~~~~~~~~~~~ 254 (296)
.++ +++.|...+++++++.+.-.+..+..|.+.+-.| -.+.+.+.++.++++.+..+...||
T Consensus 409 ~~~~~~~~G~~mgilN~~I~lpQii~sl~~g~~~~~~g~~~~~~~~~~gv~~~~aa~~~~~~~~~ 473 (477)
T TIGR01301 409 SSNLGAGQGLSMGVLNLAIVIPQIIVSLGSGPWDQLFGGGNLPAFVVGAVAAFVSGLLALILLPR 473 (477)
T ss_pred ccccCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHcCCCCeeHHHHHHHHHHHHHHHHHHhCCC
Confidence 873 2356888999999999998888877777554443 4567888888777776665554443
No 232
>PTZ00207 hypothetical protein; Provisional
Probab=97.72 E-value=0.00061 Score=68.53 Aligned_cols=181 Identities=9% Similarity=0.062 Sum_probs=119.8
Q ss_pred HHHHHHHHH--H-hHHHhHHHHHHHHHHHh-CCChhH--HHHHHHHHHHHHHHHHHHHHHHhhhhcchHH---------H
Q 045564 56 LLSRTVTCL--T-LGEGWVANLMVYMIQEF-HITSIN--SALISNIVNGFVNLFPVLGAIIADSFLGSFQ---------V 120 (296)
Q Consensus 56 ~~~l~~~~~--~-~~y~~~~~l~~yl~~~l-g~s~~~--a~~i~~~~~~~~~~~~l~~G~laDr~iGR~~---------~ 120 (296)
+|.++...+ . +...+..|+- .+.+.+ |.+..+ ....++++.+.+++|-+.+|+++ .++-||+ .
T Consensus 355 ~Wll~~~~~cg~g~gl~~~~N~~-qI~~sl~g~~~~~~~~~~~vsL~si~~~~GRl~~g~~~-~~~~~~~~~~r~prt~~ 432 (591)
T PTZ00207 355 LWCLLWSIFCCVGAHFVIIFNAR-FIYTALAGEAPDDALNTLLTVLNGVGSAVGRLCMSYFE-IWSQKRRAEDRVPITIA 432 (591)
T ss_pred HHHHHHHHHHhhCchheeeecHH-HHHHHhcCCCCCccceeeehhhhhHHHHhhHHHHHHHH-HHHHhhccccccchhHH
Confidence 355555555 2 3333444544 444667 763322 22378999999999999999998 3233333 2
Q ss_pred HHHHHHHHHHHHHHHHhhccccCCCCCccCCCCcCcCCCCchhhHHHHHHHHHHHHhhchhhhhhhhhhhccCCCccchh
Q 045564 121 IWISSFISLLGTILLDSTATFDSLRPQRCDIGLSLCKAPSKVQFAVLYSGIALACLGLGGLRFTLATMGANQFEIPQHQG 200 (296)
Q Consensus 121 i~i~~~l~~ig~~~la~~~~~p~~~~~~c~~~~~~~~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~~~ad~f~~~~~r~ 200 (296)
+.+..+ ..++++++++. .|. ..++++-++.|++.|...+...+...|+|. + .-+
T Consensus 433 l~~~~~-~~~~~lll~~~--~p~---------------------~~L~~~~~lvg~~~G~~~~~~~~i~selFg-k-~~g 486 (591)
T PTZ00207 433 LFIPSV-CIITMLTLFLT--LPK---------------------AALPLPYFIAAFANGFMAATIALVTRTIFA-K-DPA 486 (591)
T ss_pred HHHHHH-HHHHHHHHHHH--CCc---------------------cHhHHHHHHHHHHhhHhHHHHHHHHHHHhc-c-chH
Confidence 334444 66666666654 221 368888999999999999999999999998 3 578
Q ss_pred hHHHHHHHHHHHHHHHH-HHHHHhhhcc----------cc---chhhHHHHHHHHHHHHHHHHhC----CCchhHHHHHH
Q 045564 201 IFFNWFFILTYASTVIS-SAAFVYIEDN----------LS---WRLGSGLNIAANLAGVVIFLSG----KHFYFPVIVAS 262 (296)
Q Consensus 201 ~~f~~~y~~~~iG~~i~-p~v~~~l~~~----------~g---w~~~F~i~~~~~~~~~~~~~~~----~~~~~~v~~~~ 262 (296)
..||..+.+.-+|+.+= ..+.|.+.|. .| ++.+|.+.+.+.++++++-+.. +|.|++++ +
T Consensus 487 ~~yN~~~~a~pigs~~~n~~l~G~~Yd~ea~k~~~~~C~G~~C~~~~~~v~~~~~~~g~~~s~~l~~R~r~~y~~~~--~ 564 (591)
T PTZ00207 487 KHYNFCFLGSVLSAIFLNRLLYGEWYTQQADKLGQDVCTERVCVVMPLAFLLGLSFLAFITSTYVHLQYRRLCLKAL--E 564 (591)
T ss_pred HHhhHHhHHHHHHHHHHHHHHHHHHHHHHHhhCCCCeeCCceeeHhHHHHHHHHHHHHHHHHhheeeehHHHHHHHH--H
Confidence 99999888888887764 4667766542 12 6788888888777776654333 33444665 4
Q ss_pred HhcC
Q 045564 263 VKKW 266 (296)
Q Consensus 263 ~~~~ 266 (296)
.|+|
T Consensus 565 ~~~~ 568 (591)
T PTZ00207 565 ERRR 568 (591)
T ss_pred HHHH
Confidence 4443
No 233
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=97.70 E-value=3.3e-06 Score=76.78 Aligned_cols=137 Identities=12% Similarity=0.144 Sum_probs=104.7
Q ss_pred HHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhcchHHHHHHHHHHHHHHHHHHHhhccccCCCCCccC
Q 045564 71 VANLMVYMIQEFHITSINSALISNIVNGFVNLFPVLGAIIADSFLGSFQVIWISSFISLLGTILLDSTATFDSLRPQRCD 150 (296)
Q Consensus 71 ~~~l~~yl~~~lg~s~~~a~~i~~~~~~~~~~~~l~~G~laDr~iGR~~~i~i~~~l~~ig~~~la~~~~~p~~~~~~c~ 150 (296)
-.-+.++.+...++..++..++-+++..-..+.+.++||+.||.+|-|..-++-+++..+|.++.+.-...
T Consensus 63 p~alq~~fk~d~ni~~akftLlYsvYSwPNvVlcffgGflidr~fgir~gtii~~~fv~~GqliFa~Ggi~--------- 133 (459)
T KOG4686|consen 63 PGALQIDFKLDSNIEYAKFTLLYSVYSWPNVVLCFFGGFLIDRRFGIRLGTIILCIFVFLGQLIFAAGGIS--------- 133 (459)
T ss_pred chhhhhhhhcccccceeeeeeeeeeccCCCEEEeeecceeehhhhhhhHHHHHHHHHHHHHHHHHHhchHH---------
Confidence 34456677767777777888888999999999999999999999998877667677777888887654311
Q ss_pred CCCcCcCCCCchhhHHHHHHHHHHHHhhchhhhhhhhhhhccCCCccchhhHHHHHHHHHHHHHHHHHHHHHhhhccc
Q 045564 151 IGLSLCKAPSKVQFAVLYSGIALACLGLGGLRFTLATMGANQFEIPQHQGIFFNWFFILTYASTVISSAAFVYIEDNL 228 (296)
Q Consensus 151 ~~~~~~~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~~~ad~f~~~~~r~~~f~~~y~~~~iG~~i~p~v~~~l~~~~ 228 (296)
..+++...+|++.|+|.-......+.+....|..+ +..-.|++.....-+|...-..+.+++.+..
T Consensus 134 -----------~aFw~M~~GRF~FGIGgESlAVaQN~yav~wFKGK-ELn~vfGlqlSvAR~GstvNf~lm~~ly~~~ 199 (459)
T KOG4686|consen 134 -----------HAFWTMLAGRFLFGIGGESLAVAQNKYAVYWFKGK-ELNFVFGLQLSVARLGSTVNFLLMPFLYDTM 199 (459)
T ss_pred -----------HHHHHHHhhheeeccCchhhhhhhcceeEEEecCc-cccchhhHHHHHHHhhceeeeeecHHHHHHH
Confidence 24678899999999998877778888888888743 5778888866666777766556666666543
No 234
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=97.57 E-value=0.00037 Score=68.43 Aligned_cols=158 Identities=9% Similarity=0.009 Sum_probs=113.3
Q ss_pred hHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhcchHHHHHHHHHHHHHHHHHHHhhccccCCCCCcc
Q 045564 70 WVANLMVYMIQEFHITSINSALISNIVNGFVNLFPVLGAIIADSFLGSFQVIWISSFISLLGTILLDSTATFDSLRPQRC 149 (296)
Q Consensus 70 ~~~~l~~yl~~~lg~s~~~a~~i~~~~~~~~~~~~l~~G~laDr~iGR~~~i~i~~~l~~ig~~~la~~~~~p~~~~~~c 149 (296)
+.+++--++ ++++-.+...+.+...-.++-++.-++.+++-.+ +|+-+++.+++....+=++.++..
T Consensus 390 v~tFLfWHl-ed~~~~~~LfGv~~a~~~~gEI~~~ffs~klI~k-iGHv~v~~lgLa~~~~Rf~~~S~L----------- 456 (618)
T KOG3762|consen 390 VFTFLFWHL-EDLGGIKTLFGVVSALCHAGEILFYFFSFKLIEK-IGHVNVMYLGLACNVGRFLYYSYL----------- 456 (618)
T ss_pred HHHHHHHHH-hhcCCcceeeeehhhhhccchHHHHHHHHHHHHH-hcccceeeehhhHHHHHHHHHHHh-----------
Confidence 334443344 4555555555555555566667777888999999 799999999888776655444332
Q ss_pred CCCCcCcCCCCchhhHHHHHHHHHHHHhhchhhhhhhhhhhccCCCccchhhHHHHHH-HHHHHHHHHHHHHHHhhhccc
Q 045564 150 DIGLSLCKAPSKVQFAVLYSGIALACLGLGGLRFTLATMGANQFEIPQHQGIFFNWFF-ILTYASTVISSAAFVYIEDNL 228 (296)
Q Consensus 150 ~~~~~~~~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~~~ad~f~~~~~r~~~f~~~y-~~~~iG~~i~p~v~~~l~~~~ 228 (296)
.+.|..+..-++.|+-.+.++.++.+++++..|++ .|.++-+++. .--.+|-.+|.+++|.+.+.+
T Consensus 457 ------------~n~W~vLPieilqgit~aliWaa~~sY~s~vaPp~-l~at~Q~l~~g~f~GlG~g~GslIGG~~v~~f 523 (618)
T KOG3762|consen 457 ------------QNPWMVLPIEILQGITHALIWAAIISYASHVAPPG-LRATAQGLLQGIFHGLGKGLGSLIGGFVVERF 523 (618)
T ss_pred ------------cCchheeeHHHHHHHHHHHHHHHHHHHHHhhCCCc-chHHHHHHHHHHhcccCcchhhhhhhhhheee
Confidence 23466777788999999999999999999999943 5666666532 223467778889999999989
Q ss_pred cchhhHHHHHHHHHHHHHHHHhCCC
Q 045564 229 SWRLGSGLNIAANLAGVVIFLSGKH 253 (296)
Q Consensus 229 gw~~~F~i~~~~~~~~~~~~~~~~~ 253 (296)
|-+..|.+..+.+++.++.+....+
T Consensus 524 g~~ttf~~~giAcl~~l~~~~~iq~ 548 (618)
T KOG3762|consen 524 GARTTFRIFGIACLVTLALFISIQL 548 (618)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHhhh
Confidence 9899999988877777766654444
No 235
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=97.55 E-value=0.0063 Score=61.26 Aligned_cols=86 Identities=10% Similarity=-0.060 Sum_probs=59.5
Q ss_pred CCchhHHHHHHHHH--H-hHHHhHHHHHHHHHHHhCCChh---HHHHHHHHHHHHHHHHHHHHHHHhhhhcchHH-HHHH
Q 045564 51 GGRTALLSRTVTCL--T-LGEGWVANLMVYMIQEFHITSI---NSALISNIVNGFVNLFPVLGAIIADSFLGSFQ-VIWI 123 (296)
Q Consensus 51 ~~~~~~~~l~~~~~--~-~~y~~~~~l~~yl~~~lg~s~~---~a~~i~~~~~~~~~~~~l~~G~laDr~iGR~~-~i~i 123 (296)
..+|.+...+.+.+ . .+|.+..+.|....+.++.+.. ..++....+..+..++.++.|.+.-+ ++|.| .+++
T Consensus 307 ~~~r~~~~~lvi~fi~G~~~~s~~~l~p~~~~~vf~~d~~~~~~~~~~s~~~~fg~~~g~~i~g~l~~~-ir~~Kw~li~ 385 (599)
T PF06609_consen 307 KDRRGFAALLVISFISGMNFFSVNILWPQQVVNVFGSDPISITEIGWISSPVGFGSCAGAVILGLLFSK-IRHIKWQLIF 385 (599)
T ss_pred ccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCcccceeehhhhhHHHHHHHHHHHHHHHHHH-ccchhHHHHH
Confidence 34566666555555 5 7777777777777776766653 45677777888888888899999988 78855 4456
Q ss_pred HHHHHHHHHHHHHh
Q 045564 124 SSFISLLGTILLDS 137 (296)
Q Consensus 124 ~~~l~~ig~~~la~ 137 (296)
+.++.+++..+++.
T Consensus 386 ~~~~~ta~~Gama~ 399 (599)
T PF06609_consen 386 GSVLMTAFCGAMAA 399 (599)
T ss_pred HHHHHHHHHHHHHH
Confidence 77777666555553
No 236
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=97.53 E-value=0.0076 Score=50.35 Aligned_cols=111 Identities=14% Similarity=0.070 Sum_probs=79.9
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhhhhcchHHHHHHHHHHHHHHHHHHHhhccccCCCCCccCCCCcCcCCCCchhhH
Q 045564 86 SINSALISNIVNGFVNLFPVLGAIIADSFLGSFQVIWISSFISLLGTILLDSTATFDSLRPQRCDIGLSLCKAPSKVQFA 165 (296)
Q Consensus 86 ~~~a~~i~~~~~~~~~~~~l~~G~laDr~iGR~~~i~i~~~l~~ig~~~la~~~~~p~~~~~~c~~~~~~~~~~~~~~~~ 165 (296)
........++..+...+..+++..+-++ +|.|++++++.+.+.+-.+... .| +..
T Consensus 36 ~~~G~~slai~Y~~~~~s~l~~P~iv~~-lg~K~sm~lg~~~y~~y~~~~~----~~--------------------~~~ 90 (156)
T PF05978_consen 36 AGLGYYSLAILYGSFAISCLFAPSIVNK-LGPKWSMILGSLGYAIYIASFF----YP--------------------NSY 90 (156)
T ss_pred ccccHHHHHHHHHHHHHHHHhHHHHHHH-HhhHHHHHHHHHHHHHHHHHHH----hh--------------------hHH
Confidence 3334445566666777788888889999 8999999999998876333211 22 246
Q ss_pred HHHHHHHHHHHhhchhhhhhhhhhhccCCCccchhhHHHHHHHHHHHHHHHHHHHHH
Q 045564 166 VLYSGIALACLGLGGLRFTLATMGANQFEIPQHQGIFFNWFFILTYASTVISSAAFV 222 (296)
Q Consensus 166 ~l~~~~~l~gig~g~~~~~~~~~~ad~f~~~~~r~~~f~~~y~~~~iG~~i~p~v~~ 222 (296)
.++.+-++.|++.+..+.....++.+..+ ++.+++..+++....+.+.++|.++.-
T Consensus 91 ~l~~~s~l~G~~~a~lW~aqg~ylt~~s~-~~~~~~~~~ifw~i~~~s~i~G~~~~~ 146 (156)
T PF05978_consen 91 TLYPASALLGFGAALLWTAQGTYLTSYST-EETIGRNTGIFWAIFQSSLIFGNLFLF 146 (156)
T ss_pred HHHHHHHHHhhhhHHhhHhhhHHHHHcCC-HHHHhhHHHHHHHHHHHHHHHHHHHHH
Confidence 78888899999999999999999998665 456777777755555566666655443
No 237
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=97.41 E-value=0.0045 Score=62.98 Aligned_cols=69 Identities=19% Similarity=0.309 Sum_probs=57.0
Q ss_pred H-hHHHhHHHHHHHHHHHhCCChhHHHHHHHHHHH-HHHHHHHHHHHHhhhhcc--hHHHHHHHHHHHHHHHHH
Q 045564 65 T-LGEGWVANLMVYMIQEFHITSINSALISNIVNG-FVNLFPVLGAIIADSFLG--SFQVIWISSFISLLGTIL 134 (296)
Q Consensus 65 ~-~~y~~~~~l~~yl~~~lg~s~~~a~~i~~~~~~-~~~~~~l~~G~laDr~iG--R~~~i~i~~~l~~ig~~~ 134 (296)
. .+++..++++.|+++.+|++..+++.+.....+ +..++.+++|+++|| ++ .|+.+.++.++.+++.+.
T Consensus 343 ~~~~~~~~~~lP~yl~~~~g~s~~~ag~l~~~~~i~~~~vG~~l~G~l~~r-~~~~~~~~~~~~~~~~~~~~~~ 415 (633)
T TIGR00805 343 SLAFNGYITFLPKYLENQYGISSAEANFLIGVVNLPAAGLGYLIGGFIMKK-FKLNVKKAAYFAICLSTLSYLL 415 (633)
T ss_pred HHHHHHHHHHHHHHHHHHcCCcHHHHHHHhhhhhhhHHHHHHhhhhheeee-ecccHHHHHHHHHHHHHHHHHH
Confidence 5 788888999999999999999999988877665 568899999999999 67 467777777766666544
No 238
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=97.32 E-value=0.0013 Score=60.69 Aligned_cols=78 Identities=9% Similarity=-0.098 Sum_probs=65.4
Q ss_pred hhHHHHHHHHHHHHhhchhhhhhhhhhhccCCCccchhhHHHHHHHHHHHHHHHHHHHHHhhhcc---------------
Q 045564 163 QFAVLYSGIALACLGLGGLRFTLATMGANQFEIPQHQGIFFNWFFILTYASTVISSAAFVYIEDN--------------- 227 (296)
Q Consensus 163 ~~~~l~~~~~l~gig~g~~~~~~~~~~ad~f~~~~~r~~~f~~~y~~~~iG~~i~p~v~~~l~~~--------------- 227 (296)
+...++++.++.|.|.+...+..+++++++.+++ .+.+..|+......+|..++|++++.+...
T Consensus 9 ~~~~~l~~~f~~g~G~~~lq~~~n~~v~~~~~~~-~~~~~l~~~~~~~~~G~~~gP~i~~~~i~~~~~~~~~~~~~~~~~ 87 (310)
T TIGR01272 9 YYVLFLGALFVLASGLTILQVAANPYVSILGPIE-TAASRLALTQAFNKLGTTVAPLFGGSLILSGAGDLSMQVATANAE 87 (310)
T ss_pred HHHHHHHHHHHHHhhHHHHHhhHHHHHHHHCCcc-hHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCCcchhhhhhhhhHH
Confidence 5678999999999999999999999999999844 577888888888999999999999877632
Q ss_pred -ccchhhHHHHHHHH
Q 045564 228 -LSWRLGSGLNIAAN 241 (296)
Q Consensus 228 -~gw~~~F~i~~~~~ 241 (296)
.+|+++|++.+++.
T Consensus 88 ~~~~~~~yl~ia~~~ 102 (310)
T TIGR01272 88 AAKVHTPYLLLAGAL 102 (310)
T ss_pred HHHHHHHHHHHHHHH
Confidence 36899998655543
No 239
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=97.17 E-value=0.075 Score=52.31 Aligned_cols=131 Identities=14% Similarity=0.054 Sum_probs=76.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhcchHHHHHH-HHHHHHHHHHHHHhhccccCCCCCccCCCCcCcCCCCchhhHHHH
Q 045564 90 ALISNIVNGFVNLFPVLGAIIADSFLGSFQVIWI-SSFISLLGTILLDSTATFDSLRPQRCDIGLSLCKAPSKVQFAVLY 168 (296)
Q Consensus 90 ~~i~~~~~~~~~~~~l~~G~laDr~iGR~~~i~i-~~~l~~ig~~~la~~~~~p~~~~~~c~~~~~~~~~~~~~~~~~l~ 168 (296)
+...++..+...+..|+-|-++|+ -|+||.++. ..++..+....+.+.. | .+.....
T Consensus 73 ~~~~sis~l~~all~P~lGa~aD~-~~~Rk~~l~~~~~~~~~~~~~l~~v~--~-------------------~~~~~~~ 130 (477)
T PF11700_consen 73 LYANSISGLLQALLAPFLGAIADY-GGRRKRFLLIFTLLGVLATALLWFVS--P-------------------GQWWLAL 130 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcc-cccchHHHHHHHHHHHHHHHHHHHhC--c-------------------chHHHHH
Confidence 456788888999999999999999 576665544 4444444444433321 1 1222222
Q ss_pred HHHHHHHHhhchhhhhhhhhhhccCCCccc-------------------------hhhHHHHHHHHHHHHHHHHHHHHHh
Q 045564 169 SGIALACLGLGGLRFTLATMGANQFEIPQH-------------------------QGIFFNWFFILTYASTVISSAAFVY 223 (296)
Q Consensus 169 ~~~~l~gig~g~~~~~~~~~~ad~f~~~~~-------------------------r~~~f~~~y~~~~iG~~i~p~v~~~ 223 (296)
+..++..++.+.......+++.|+-+++.+ |++.-++-+...++|+++.-.+.-.
T Consensus 131 ~l~iia~v~~~~~~vfyna~LP~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vS~~G~a~Gy~G~~v~l~i~l~ 210 (477)
T PF11700_consen 131 VLFIIANVGYEASNVFYNAYLPDLARPEPRVRAAREPSANGNISDSEYEAVDSLTRGRVSGLGWALGYIGGLVALLISLL 210 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHhHhhcCCChhhhhhhhhhccCCCChhhhhhHHHhhhchhHHHHHHHHHHHHHHHHHHHHH
Confidence 223344466677777788888888874322 1444444345567777776554433
Q ss_pred hhcc--------ccchhhHHHHHHHHH
Q 045564 224 IEDN--------LSWRLGSGLNIAANL 242 (296)
Q Consensus 224 l~~~--------~gw~~~F~i~~~~~~ 242 (296)
+... .+-|..+.+.++..+
T Consensus 211 ~~~~~~~~~~~~~~~r~~~~~~a~ww~ 237 (477)
T PF11700_consen 211 LVISPGSTASNTWAIRVAFLIVALWWL 237 (477)
T ss_pred HHHcCCCccccchhhhHHHHHHHHHHH
Confidence 3211 234677777666433
No 240
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=97.08 E-value=0.0012 Score=63.77 Aligned_cols=163 Identities=16% Similarity=0.073 Sum_probs=102.3
Q ss_pred hHHHHHHHHH-H-hHHHh-HHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhh---cchHHHHHH-HHHH
Q 045564 55 ALLSRTVTCL-T-LGEGW-VANLMVYMIQEFHITSINSALISNIVNGFVNLFPVLGAIIADSF---LGSFQVIWI-SSFI 127 (296)
Q Consensus 55 ~~~~l~~~~~-~-~~y~~-~~~l~~yl~~~lg~s~~~a~~i~~~~~~~~~~~~l~~G~laDr~---iGR~~~i~i-~~~l 127 (296)
.++.+..+.+ . ..+.. .+++++|+ +.+|++..-.+.+-.+.-+...+.+++.|..+||+ +||||-++. +.+.
T Consensus 33 ~li~v~~ia~Gvqf~wA~elsy~tPyl-~~lGvphk~~S~iw~~gPi~G~~vQP~vG~~SDrc~sr~GRRRPfI~~~s~~ 111 (498)
T KOG0637|consen 33 KLISVASIAAGVQFGWALELSYLTPYL-QSLGVPHKWSSIIWLCGPLSGLLVQPLVGSASDRCTSRYGRRRPFILAGSLL 111 (498)
T ss_pred HHHHHHHHHHHHHHHHHHHhccccHHH-HHcCCCcccccccccccccccceecccccccccccccccccccchHHHhhHH
Confidence 3444444444 3 33333 45666776 57899988887777777788889999999999985 688776554 4455
Q ss_pred HHHHHHHHHhhccccCCCCCccCCCCcCcCCCCchhhHHHHHHHHHHHHhhchhhhhhhhhhhccCCCccchhhHHHHHH
Q 045564 128 SLLGTILLDSTATFDSLRPQRCDIGLSLCKAPSKVQFAVLYSGIALACLGLGGLRFTLATMGANQFEIPQHQGIFFNWFF 207 (296)
Q Consensus 128 ~~ig~~~la~~~~~p~~~~~~c~~~~~~~~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~~~ad~f~~~~~r~~~f~~~y 207 (296)
.+++.+++..++-+-.+ -|++- ...........++++..+.=+..-..+...-++.+|+...+.++.++.+++.
T Consensus 112 i~~~l~Lig~aaDig~~---lgd~~---~~~~~~rai~~~~lg~~LLD~A~n~~qgp~ra~L~Dl~~~d~~~~~Ans~f~ 185 (498)
T KOG0637|consen 112 IAVSLFLIGYAADIGLL---LGDNE---RKPVKPRAIVLFILGFWLLDVANNTLQGPCRALLADLARGDAKKTRANSVFS 185 (498)
T ss_pred HHHHHhhhhhHhhhhHH---hcCCc---ccccchHHHHHHHHHhHHHHhhhhhhhhhHHHHHHHhccChhhhhccchhHH
Confidence 55655554443211000 01110 0001112345566666666677777888899999999973333333777777
Q ss_pred HHHHHHHHHHHHHHHhh
Q 045564 208 ILTYASTVISSAAFVYI 224 (296)
Q Consensus 208 ~~~~iG~~i~p~v~~~l 224 (296)
+.+.+|+.+|...++|.
T Consensus 186 ~f~avGnvLGY~~g~y~ 202 (498)
T KOG0637|consen 186 FFMAVGNVLGYALGSYL 202 (498)
T ss_pred HHHHhcceeeeeccccc
Confidence 88889998888777654
No 241
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=97.01 E-value=0.062 Score=52.89 Aligned_cols=106 Identities=8% Similarity=-0.002 Sum_probs=72.4
Q ss_pred HHHHHHHHHHHHhhhhcchHHHHHHHHHHHHHHHHHHHhhccccCCCCCccCCCCcCcCCCCchhhHHHHHHHHHHHHhh
Q 045564 99 FVNLFPVLGAIIADSFLGSFQVIWISSFISLLGTILLDSTATFDSLRPQRCDIGLSLCKAPSKVQFAVLYSGIALACLGL 178 (296)
Q Consensus 99 ~~~~~~l~~G~laDr~iGR~~~i~i~~~l~~ig~~~la~~~~~p~~~~~~c~~~~~~~~~~~~~~~~~l~~~~~l~gig~ 178 (296)
.........+..-|+ +|||.....+.++..++.++..... .. .......+...+...+.
T Consensus 362 ~~~p~~~~~~~~~~~-~gR~~~~~~~~~~~~~~~~~~~~~~---~~-----------------~~~~~~~~~~~~~~~~~ 420 (521)
T KOG0255|consen 362 VELPAYFRNGLLLPE-FGRRPPLFLSLFLAGIGLLLFGWLP---DD-----------------LGGWLHWILPLLGKFFI 420 (521)
T ss_pred HHhhHHHHHHHHHHH-hCcHHHHHHHHHHHHHHHHHHHHhh---cc-----------------chhHHHHHHHHHHHHHH
Confidence 444455556889999 7999999999999998888776653 10 01012222222333344
Q ss_pred chhhhhhhhhhhccCCCccchhhHHHHHHHHHHHHHHHHHHHHHhhhc
Q 045564 179 GGLRFTLATMGANQFEIPQHQGIFFNWFFILTYASTVISSAAFVYIED 226 (296)
Q Consensus 179 g~~~~~~~~~~ad~f~~~~~r~~~f~~~y~~~~iG~~i~p~v~~~l~~ 226 (296)
+........+.+|++|+. .|..+.+.......+|++++|.+......
T Consensus 421 ~~~~~~~~~~~~el~pt~-~r~~~~~~~~~~~~~~~i~ap~~~~~~~~ 467 (521)
T KOG0255|consen 421 GSAFNLIFLYSAELIPTV-VRNTAVGAISAAARLGSILAPLFPLLLRQ 467 (521)
T ss_pred HHHHHHHHHHHHhhccHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 444455688899999954 78899998888889999999987655544
No 242
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=96.87 E-value=0.086 Score=50.76 Aligned_cols=151 Identities=13% Similarity=-0.007 Sum_probs=92.2
Q ss_pred HHHHHHHHHHH-hCCChhHHHH-HHHHHHHHHHHHHHHHHHHhhhhcchHHHHHHHHHHHHHHHHHHHhhccccCCCCCc
Q 045564 71 VANLMVYMIQE-FHITSINSAL-ISNIVNGFVNLFPVLGAIIADSFLGSFQVIWISSFISLLGTILLDSTATFDSLRPQR 148 (296)
Q Consensus 71 ~~~l~~yl~~~-lg~s~~~a~~-i~~~~~~~~~~~~l~~G~laDr~iGR~~~i~i~~~l~~ig~~~la~~~~~p~~~~~~ 148 (296)
-.++..|+++. .|++..+... +.-++.=......++...+.|. +|-|++++++.+...+..+++....
T Consensus 23 EPfl~~yL~~~~kn~T~~qv~~~i~Pv~tYSyl~~l~~vflltd~-l~Ykpviil~~~~~i~t~~lll~~~--------- 92 (412)
T PF01770_consen 23 EPFLTPYLTGPDKNFTEEQVNNEIYPVWTYSYLAFLLPVFLLTDY-LRYKPVIILQALSYIITWLLLLFGT--------- 92 (412)
T ss_pred CccchHHHcCCccCCCHHHHHHhhhhHHHHHHHHHHHHHHHHHHH-hhhhHHHHHHHHHHHHHHHHHHHHC---------
Confidence 46677899887 8998888653 4445555556667777999999 7999999999988777666554432
Q ss_pred cCCCCcCcCCCCchhhHHHHHHHHHHHHhhchhhhhhhhhhhccCCC-ccchhhHHHHHHHHHHHHHHHHHHHHHhhhc-
Q 045564 149 CDIGLSLCKAPSKVQFAVLYSGIALACLGLGGLRFTLATMGANQFEI-PQHQGIFFNWFFILTYASTVISSAAFVYIED- 226 (296)
Q Consensus 149 c~~~~~~~~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~~~ad~f~~-~~~r~~~f~~~y~~~~iG~~i~p~v~~~l~~- 226 (296)
+...+-+..++.|++.+. ...-++++--..|+ +-+|.+.+ .-.+.-+|-.++.+++..+..
T Consensus 93 --------------sv~~mq~~q~~yg~~~a~-evay~sYiys~v~~~~yq~vts~--~raa~l~g~~~s~~lgQllvs~ 155 (412)
T PF01770_consen 93 --------------SVLAMQLMQFFYGLATAA-EVAYYSYIYSVVDKEHYQKVTSY--TRAATLVGRFISSLLGQLLVSF 155 (412)
T ss_pred --------------cHHHHHHHHHHHHHHHHH-HHHHHHHheeecCHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHh
Confidence 234455556666666554 33344444444442 22333333 334444555555555554443
Q ss_pred -cccchhhHHHHHHHHHHHHHHH
Q 045564 227 -NLSWRLGSGLNIAANLAGVVIF 248 (296)
Q Consensus 227 -~~gw~~~F~i~~~~~~~~~~~~ 248 (296)
..++...+.+......+++++-
T Consensus 156 ~~~sy~~L~~isl~~~~~a~~~~ 178 (412)
T PF01770_consen 156 GGVSYFQLNYISLASVSLALLIA 178 (412)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHH
Confidence 3456667777777666666553
No 243
>PRK03612 spermidine synthase; Provisional
Probab=96.82 E-value=0.17 Score=50.42 Aligned_cols=156 Identities=15% Similarity=0.053 Sum_probs=82.1
Q ss_pred HHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhcchHHHHHHHHHHHHHHHHHHH-hhccccCCCCCccCCCCc
Q 045564 76 VYMIQEFHITSINSALISNIVNGFVNLFPVLGAIIADSFLGSFQVIWISSFISLLGTILLD-STATFDSLRPQRCDIGLS 154 (296)
Q Consensus 76 ~yl~~~lg~s~~~a~~i~~~~~~~~~~~~l~~G~laDr~iGR~~~i~i~~~l~~ig~~~la-~~~~~p~~~~~~c~~~~~ 154 (296)
..+...+|-+....+.+++++.++..+|..++|+++++ .-|+.. .+-..+..++.+... +....+..
T Consensus 39 r~l~~~~G~s~~~~~~ii~~fl~glalGs~l~~~~~~~-~~~~~~-~~e~~i~l~~~~~~~ll~~~~~~~---------- 106 (521)
T PRK03612 39 TLASYLLGDSVTQFSTVIGLMLFAMGVGALLSKYLLRD-AAAGFV-AVELLLALLGGLSALILYAAFAFQ---------- 106 (521)
T ss_pred HHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHhhhhh-HHHHHH-HHHHHHHHHHHHHHHHHHHHHHHH----------
Confidence 34555678888888999999999999999988888755 223222 111111111111100 00000100
Q ss_pred CcCCCCchhhHHHHHHHHHHHHhhchhhhhhhhhhhccCCCccchhhHHHHHHHHHHHHHHHHHHHHHhhhc-cccch-h
Q 045564 155 LCKAPSKVQFAVLYSGIALACLGLGGLRFTLATMGANQFEIPQHQGIFFNWFFILTYASTVISSAAFVYIED-NLSWR-L 232 (296)
Q Consensus 155 ~~~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~~~ad~f~~~~~r~~~f~~~y~~~~iG~~i~p~v~~~l~~-~~gw~-~ 232 (296)
......++...++.++..|+..|....+..+... ..-++..+..|....+|+++|.++.+++.- ..|-. .
T Consensus 107 ------~~~~~~~~~~~~~~~~l~G~~~Pl~~~~~~~~~~--~~~g~~~g~ly~~ntlGa~~G~l~~~~vLlp~lG~~~t 178 (521)
T PRK03612 107 ------GLSRLLLYVLVLLIGLLIGMEIPLLMRILQRIRD--QHLGHNVATVLAADYLGALVGGLAFPFLLLPRLGLIRT 178 (521)
T ss_pred ------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc--cchhhhhhhhHhHHhHHHHHHHHHHHHHHHHhcchHHH
Confidence 0011122233345566666666655554443221 113445666778888999999988887754 45643 3
Q ss_pred hHHHHHHHHHHHHHHHHhC
Q 045564 233 GSGLNIAANLAGVVIFLSG 251 (296)
Q Consensus 233 ~F~i~~~~~~~~~~~~~~~ 251 (296)
.+.+..+-.+++++.++..
T Consensus 179 ~~~~a~l~~~~a~~~~~~~ 197 (521)
T PRK03612 179 AALTGSLNLLAALVFLWLF 197 (521)
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 3444444444444443333
No 244
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=96.78 E-value=0.13 Score=50.77 Aligned_cols=142 Identities=11% Similarity=0.038 Sum_probs=91.3
Q ss_pred hHHHhHHHHHHHHHHHh-----CCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhcchH-H------HHHHHHHHHHHHHH
Q 045564 66 LGEGWVANLMVYMIQEF-----HITSINSALISNIVNGFVNLFPVLGAIIADSFLGSF-Q------VIWISSFISLLGTI 133 (296)
Q Consensus 66 ~~y~~~~~l~~yl~~~l-----g~s~~~a~~i~~~~~~~~~~~~l~~G~laDr~iGR~-~------~i~i~~~l~~ig~~ 133 (296)
.|.-..+.+..|..+.. |++ -.+.+..++..+...+..|+.+++=.| .+|| | -+.+|.++..+|.+
T Consensus 283 ~~~Q~~~sl~lfa~~~vd~~~~g~~-ip~~~~qslNp~~ii~l~P~~a~lw~~-l~~~~~~~s~~~Kfa~g~~~~g~~f~ 360 (493)
T PRK15462 283 FAQQGGSSISLYIDRFVNRDMFGYT-VPTAMFQSINAFAVMLCGVFLAWVVKE-SVAGNRTVRIWGKFALGLGLMSAGFC 360 (493)
T ss_pred HHHHhhHHHHHHHHHhccchhccee-eCHHHHHhHhHHHHHHHHHHHHHHHHH-HhcCCCCCCcHHHHHHHHHHHHHHHH
Confidence 44444455555665542 221 234566777777777777777777555 4322 1 37888888889988
Q ss_pred HHHhhccccCCCCCccCCCCcCcCCCCchhhHHHHHHHHHHHHhhchhhhhhhhhhhccCCCccchhhHHHHHHHHH-HH
Q 045564 134 LLDSTATFDSLRPQRCDIGLSLCKAPSKVQFAVLYSGIALACLGLGGLRFTLATMGANQFEIPQHQGIFFNWFFILT-YA 212 (296)
Q Consensus 134 ~la~~~~~p~~~~~~c~~~~~~~~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~~~ad~f~~~~~r~~~f~~~y~~~-~i 212 (296)
++.++..... ++...+...+++..++.++|.-...|...++++++.|+ +.++..++.+++.. .+
T Consensus 361 ~l~~~~~~~~--------------~~~~~s~~wl~~~~~~~t~gEl~~sPvgls~~~~laP~-~~~g~~mg~w~l~~~~~ 425 (493)
T PRK15462 361 ILTLSARWSA--------------MYGHSSLPLMVLGLAVMGFAELFIDPVAMSQITRIEIP-GVTGVLTGIYMLLSGAI 425 (493)
T ss_pred HHHHHHhhcC--------------CCCCcCHHHHHHHHHHHHHHHHHHChHHHHHHHHhChH-HHHHHHHHHHHHHHHHH
Confidence 8877642110 00012334466777889999999999999999999994 47888888876633 46
Q ss_pred HHHHHHHHHHhh
Q 045564 213 STVISSAAFVYI 224 (296)
Q Consensus 213 G~~i~p~v~~~l 224 (296)
|..++..+.+..
T Consensus 426 ~~~~~g~~~~~~ 437 (493)
T PRK15462 426 ANYLAGVIADQT 437 (493)
T ss_pred HHHHHHHHHHHh
Confidence 666655555544
No 245
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=96.67 E-value=0.027 Score=54.55 Aligned_cols=158 Identities=13% Similarity=0.100 Sum_probs=93.1
Q ss_pred HhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhcch-HHHHHHHHHHHHHHHHHHHhhccccCCCCCccCCCCcCcCCC
Q 045564 81 EFHITSINSALISNIVNGFVNLFPVLGAIIADSFLGS-FQVIWISSFISLLGTILLDSTATFDSLRPQRCDIGLSLCKAP 159 (296)
Q Consensus 81 ~lg~s~~~a~~i~~~~~~~~~~~~l~~G~laDr~iGR-~~~i~i~~~l~~ig~~~la~~~~~p~~~~~~c~~~~~~~~~~ 159 (296)
.-|++...++.+.....+++.++.++.|.++|| ... |+++++......++.+.+......+.
T Consensus 295 ~sgY~~~~aG~ig~l~iv~Gmlga~~~gii~Dk-tk~fk~~~~v~~~~~~v~~~~l~~~t~~~~---------------- 357 (480)
T KOG2563|consen 295 PSGYEGVFAGYIGALMIVAGMLGALASGIIADK-TKKFKLTTLVLYLFALVGTLMLLTCTLFLG---------------- 357 (480)
T ss_pred cccCCccccchhHHHHHHHHHHHHHHHHhhhhh-hhhHHHHHHHHHHHHHHHHHHHHHhhccCC----------------
Confidence 346777889999999999999999999999999 455 44555555555555322222221111
Q ss_pred CchhhHHHHHHHHHHHHhhchhhhhhhhhhhcc-CCCccchhhHHHHHHHHHHHHHHHHHHHHHhhhcccc---chhhHH
Q 045564 160 SKVQFAVLYSGIALACLGLGGLRFTLATMGANQ-FEIPQHQGIFFNWFFILTYASTVISSAAFVYIEDNLS---WRLGSG 235 (296)
Q Consensus 160 ~~~~~~~l~~~~~l~gig~g~~~~~~~~~~ad~-f~~~~~r~~~f~~~y~~~~iG~~i~p~v~~~l~~~~g---w~~~F~ 235 (296)
....++....+.|....+..|.-.-+..|. ||..+.-. .++..+..++-+.+=.++.+...+..+ |.++.-
T Consensus 358 ---~~viv~~t~~~~g~~~~~~~Pig~ElgvE~TyPv~E~tS--sGll~~~gq~f~~~~~~~~~~~~~~~~~~~~~~~~~ 432 (480)
T KOG2563|consen 358 ---DSVIVFTTCGLLGFFGTGYLPIGFELGVETTYPVAEGTS--SGLLNLSGQIFGVILVFIMGILAEDLGPPGNTFPAN 432 (480)
T ss_pred ---ceEehhhhHHHHHHhhcCCCCcceeeeeeeccccCCccc--ceeEEeehhHHHHHHHHHHHHHhhccCCCCCCccch
Confidence 123455555566666666666666665554 45332222 233344445555555566666666554 444434
Q ss_pred HHH-HHHHHHHHHHHhCCCchhHHHH
Q 045564 236 LNI-AANLAGVVIFLSGKHFYFPVIV 260 (296)
Q Consensus 236 i~~-~~~~~~~~~~~~~~~~~~~v~~ 260 (296)
+.. ....++.++..+.+|.|+|.-.
T Consensus 433 i~~~~~~~l~~~lva~~r~~y~R~~~ 458 (480)
T KOG2563|consen 433 IFLTVSALLGAILVAFFRPDYRRLRA 458 (480)
T ss_pred hHhHHHHHHHHHHHhhhhhhHHhHhh
Confidence 433 3445556666778888876543
No 246
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=96.63 E-value=0.02 Score=42.82 Aligned_cols=66 Identities=9% Similarity=0.044 Sum_probs=57.9
Q ss_pred HHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhcchHHHHHHHHHHHHHHHHHHHhh
Q 045564 72 ANLMVYMIQEFHITSINSALISNIVNGFVNLFPVLGAIIADSFLGSFQVIWISSFISLLGTILLDST 138 (296)
Q Consensus 72 ~~l~~yl~~~lg~s~~~a~~i~~~~~~~~~~~~l~~G~laDr~iGR~~~i~i~~~l~~ig~~~la~~ 138 (296)
+.+.+.+.++.++|.++++++.+...+++.+|.+...++.++ ..+++.+..+.++..+..+.++++
T Consensus 12 TplLP~M~~~~~ls~~~ag~lasaNy~GYL~GAl~~~~~~~~-~~~~~~~~~~l~~~~~~~~~ma~~ 77 (85)
T PF06779_consen 12 TPLLPLMQADGGLSLSQAGWLASANYLGYLVGALLASRLPRH-SRPRRLLRAGLLLTVLSTAAMALT 77 (85)
T ss_pred HhHhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhc-ccHHHHHHHHHHHHHHHHHHHHHH
Confidence 456678899999999999999999999999999999999999 688888999888888877766654
No 247
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=96.49 E-value=0.037 Score=52.66 Aligned_cols=132 Identities=14% Similarity=0.183 Sum_probs=95.2
Q ss_pred HHHHHHHH-HHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhcchHHHHHHHHHHHHH-HHHHHHhhccccCCCCCc
Q 045564 71 VANLMVYM-IQEFHITSINSALISNIVNGFVNLFPVLGAIIADSFLGSFQVIWISSFISLL-GTILLDSTATFDSLRPQR 148 (296)
Q Consensus 71 ~~~l~~yl-~~~lg~s~~~a~~i~~~~~~~~~~~~l~~G~laDr~iGR~~~i~i~~~l~~i-g~~~la~~~~~p~~~~~~ 148 (296)
..+...++ .+.+|+++.|.+.+.+.-.....+.++.-++..||..|.-+....-.++.++ ..+++....
T Consensus 280 ~~~t~~~l~~~rfg~ss~~~G~vl~~tGl~m~~~ql~~~~~l~~~~~~~~a~l~~~l~~~vP~~llls~~~--------- 350 (451)
T KOG2615|consen 280 LENTVLFLTHGRFGYSSMQQGKVLSTTGLLMLVIQLALVPILPRYKGNIKAVLLFSLLLIVPAFLLLSLAR--------- 350 (451)
T ss_pred HHhhHHHhhcCccCCChhhheeeeehhhHHHHHHHHhccccccccccchhhHHHHHHHHHHHHHHHHhccc---------
Confidence 34444444 5679999999998888888888888888888899965544433333322222 222222111
Q ss_pred cCCCCcCcCCCCchhhHHHHHHHHHHHHhhchhhhhhhhhhhccCCCccchhhHHHHHHHHHHHHHHHHHHHHHhhhc
Q 045564 149 CDIGLSLCKAPSKVQFAVLYSGIALACLGLGGLRFTLATMGANQFEIPQHQGIFFNWFFILTYASTVISSAAFVYIED 226 (296)
Q Consensus 149 c~~~~~~~~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~~~ad~f~~~~~r~~~f~~~y~~~~iG~~i~p~v~~~l~~ 226 (296)
....++++..+..+..+...++...++....|.+ .|+...+++.....++=.+||++.|.+..
T Consensus 351 --------------~~~~l~~~s~l~sf~~A~~vt~Lt~Lv~~~~~~~-qrG~~~Gi~~Sl~alaRaiGPlv~g~i~~ 413 (451)
T KOG2615|consen 351 --------------TPVVLYLGSTLKSFSTASVVTCLTSLVHKYGPQS-QRGTLNGIFRSLGALARAIGPLVSGVIFS 413 (451)
T ss_pred --------------cchhhhHHHHHHHHHHHHhhHHHHHHHHhcCCcc-cchHHHHHHHHHHHHHHHhhhhhhheeEE
Confidence 2256788888889999989999999999888844 79999999888889999999999988764
No 248
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=96.39 E-value=0.084 Score=50.79 Aligned_cols=125 Identities=18% Similarity=0.117 Sum_probs=81.1
Q ss_pred HHHHHHHHHHHhCC---ChhH----HHHHHHHHHHHHHHHHHHHHHHhhhhcch-HHHHHHHHHHHHHHHHHHHhhcccc
Q 045564 71 VANLMVYMIQEFHI---TSIN----SALISNIVNGFVNLFPVLGAIIADSFLGS-FQVIWISSFISLLGTILLDSTATFD 142 (296)
Q Consensus 71 ~~~l~~yl~~~lg~---s~~~----a~~i~~~~~~~~~~~~l~~G~laDr~iGR-~~~i~i~~~l~~ig~~~la~~~~~p 142 (296)
....|.|+++..+- +..+ .+...++..+...+..|+-|-++|. .|+ ||.+.+...+..+....+++.. |
T Consensus 35 t~ifply~~~~~~~~g~~~~~~~a~~gy~~aia~llia~LapiLG~iaD~-~g~Rk~~~~~f~~i~i~~~~~L~~i~--~ 111 (438)
T COG2270 35 TFIFPLYFTSVAGAGGVDPASSTAYWGYASAIAGLLIALLAPILGTIADY-PGPRKKFFGFFTAIGIISTFLLWFIP--P 111 (438)
T ss_pred eehhHHHHHHHHhhcCCCCcchhhHHHHHHHHHHHHHHHHHHHhhhhhcc-CCCcchHHHHHHHHHHHHHHHHHHhC--C
Confidence 35677888877655 4333 3456778888889999999999999 585 5556666666666655555432 1
Q ss_pred CCCCCccCCCCcCcCCCCchhhHHHHHHHHHHHHhhchhhhhhhhhhhccCCC-ccchhhHHHHHHHHHHHHHHHHH
Q 045564 143 SLRPQRCDIGLSLCKAPSKVQFAVLYSGIALACLGLGGLRFTLATMGANQFEI-PQHQGIFFNWFFILTYASTVISS 218 (296)
Q Consensus 143 ~~~~~~c~~~~~~~~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~~~ad~f~~-~~~r~~~f~~~y~~~~iG~~i~p 218 (296)
+..+...++..++..++.........+++.|..++ +..|.+..+| -..++|+.+.-
T Consensus 112 ------------------~s~~~~~l~~~il~~i~~~~s~Vfyds~L~~~~~k~~~~riS~lg~--~~gylgs~i~l 168 (438)
T COG2270 112 ------------------GSYLLLLLLFLILASIGFEFSNVFYDSMLPRLTTKDNMGRISGLGW--ALGYLGSVILL 168 (438)
T ss_pred ------------------CchHHHHHHHHHHHHHhcchhheehhhHhhhhcCccccCccccccc--ccccccchHHH
Confidence 11234445556677788888888889999998873 3345555553 23455555433
No 249
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=96.30 E-value=0.023 Score=55.72 Aligned_cols=127 Identities=17% Similarity=0.172 Sum_probs=98.2
Q ss_pred HHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhcchHHHHHHHHHHHHHHHHHHHhhccccCCCCCccCCCC
Q 045564 74 LMVYMIQEFHITSINSALISNIVNGFVNLFPVLGAIIADSFLGSFQVIWISSFISLLGTILLDSTATFDSLRPQRCDIGL 153 (296)
Q Consensus 74 l~~yl~~~lg~s~~~a~~i~~~~~~~~~~~~l~~G~laDr~iGR~~~i~i~~~l~~ig~~~la~~~~~p~~~~~~c~~~~ 153 (296)
+..|+...++++..+.+...+.......++.++...+--+.+|-|+++.+|.+.-.++..+.++..
T Consensus 264 ~~~yl~~~f~w~~~~~s~~~~~~~~~~~i~~l~~~~~l~~~l~~~~~i~lGl~~~~~~~~~~af~~-------------- 329 (463)
T KOG2816|consen 264 LLLYLKAKFGWNKKEFSDLLSLVSILGIISQLLLLPLLSSILGEKRLISLGLLSEFLQLLLFAFAT-------------- 329 (463)
T ss_pred EEEEEeeecCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHhhHHHHHHHHHHHHHHHhc--------------
Confidence 355778889999999999999999999999999884444448999999999999999888877663
Q ss_pred cCcCCCCchhhHHHHHHHHHHHHhhchhhhhhhhhhhccCCCccchhhHHHHHHHHHHHHHHHHHHHHHhhh
Q 045564 154 SLCKAPSKVQFAVLYSGIALACLGLGGLRFTLATMGANQFEIPQHQGIFFNWFFILTYASTVISSAAFVYIE 225 (296)
Q Consensus 154 ~~~~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~~~ad~f~~~~~r~~~f~~~y~~~~iG~~i~p~v~~~l~ 225 (296)
+.+..+.+..+ ....+...|...++.+.+.+ +++++..+++....-.+.++++|.+-+.+.
T Consensus 330 ---------~~w~~~~~~v~-~~~~~~~~pa~~s~~s~~v~-~~e~g~v~~~is~i~~l~~~~~~~~~~~i~ 390 (463)
T KOG2816|consen 330 ---------ETWMMFAAGVV-VALAGIVFPAIRAFASILVS-PEEQGKVFGIISGIEGLSGVVSPALYGNIF 390 (463)
T ss_pred ---------cchhhhHHHHH-HHhhcchhHHHHhHHHhhcc-cccccchhhHHHHHHHHhhhhhHHHHHHHH
Confidence 12344444433 34455577888888888877 447899999999988999999998776663
No 250
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=96.02 E-value=0.0076 Score=54.89 Aligned_cols=149 Identities=16% Similarity=0.091 Sum_probs=93.1
Q ss_pred HHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhcchHHHHHHHHHHHHHHHHHHHhhccccCCCCCccCCCCc
Q 045564 75 MVYMIQEFHITSINSALISNIVNGFVNLFPVLGAIIADSFLGSFQVIWISSFISLLGTILLDSTATFDSLRPQRCDIGLS 154 (296)
Q Consensus 75 ~~yl~~~lg~s~~~a~~i~~~~~~~~~~~~l~~G~laDr~iGR~~~i~i~~~l~~ig~~~la~~~~~p~~~~~~c~~~~~ 154 (296)
..|+.+.+|..+.+.+.+.....+...++..+.|-++|+ .|||+.-+..++.++++.+ .-+-
T Consensus 60 vYyLYstYgFgkG~IgqLfiaGfgSsmLFGtivgSLaDk-qGRKracvtycitYiLsCi----TKhS------------- 121 (454)
T KOG4332|consen 60 VYYLYSTYGFGKGDIGQLFIAGFGSSMLFGTIVGSLADK-QGRKRACVTYCITYILSCI----TKHS------------- 121 (454)
T ss_pred eeeeehhcCccCCccceeeecccchHHHHHHHHHHHHhh-hccccceeeehHHHHHHHH----hhcC-------------
Confidence 447788889999998887777777788888899999999 7999987777776665332 3211
Q ss_pred CcCCCCchhhHHHHHHHHHHHHhhchhhhhhhhh-hhccCCC----ccchhhHHHH-HHHHHHHHHHHHHHHHHhhhccc
Q 045564 155 LCKAPSKVQFAVLYSGIALACLGLGGLRFTLATM-GANQFEI----PQHQGIFFNW-FFILTYASTVISSAAFVYIEDNL 228 (296)
Q Consensus 155 ~~~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~~-~ad~f~~----~~~r~~~f~~-~y~~~~iG~~i~p~v~~~l~~~~ 228 (296)
.+.-+++++|++.|+......+.--+. ++|--.+ .+....-|+- ..+.+.+-++++.+.+..+++..
T Consensus 122 -------pqYkVLmVGR~LGGiaTsLLFSaFEsWliaEHnekr~FeqqWls~TFskA~ffgNglvAiiaGlfgn~lvd~~ 194 (454)
T KOG4332|consen 122 -------PQYKVLMVGRVLGGIATSLLFSAFESWLIAEHNEKRGFEQQWLSVTFSKAVFFGNGLVAIIAGLFGNLLVDTF 194 (454)
T ss_pred -------CceEEEeehhhhhhHHHHHHHHHHHHHHHHHhhhccCChHhhhhHHHHHHHHhhccHHHHHHHHHHHHHHHHh
Confidence 134578999999999988876655443 3333211 1111111221 11233344555666666666654
Q ss_pred --cchhhHHHHHHHHHHHHHHH
Q 045564 229 --SWRLGSGLNIAANLAGVVIF 248 (296)
Q Consensus 229 --gw~~~F~i~~~~~~~~~~~~ 248 (296)
|=-.+|-..+...+++..+.
T Consensus 195 slGPVAPFdAAacfLaigmAvi 216 (454)
T KOG4332|consen 195 SLGPVAPFDAAACFLAIGMAVI 216 (454)
T ss_pred ccCCCCchHHHHHHHHHHHHHH
Confidence 43456666665555555444
No 251
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=95.53 E-value=2.3 Score=41.37 Aligned_cols=186 Identities=13% Similarity=0.029 Sum_probs=90.0
Q ss_pred HHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhcchHHHHHHHHHHHHHHHHHHHhhccccCCCCCccCCCC
Q 045564 74 LMVYMIQEFHITSINSALISNIVNGFVNLFPVLGAIIADSFLGSFQVIWISSFISLLGTILLDSTATFDSLRPQRCDIGL 153 (296)
Q Consensus 74 l~~yl~~~lg~s~~~a~~i~~~~~~~~~~~~l~~G~laDr~iGR~~~i~i~~~l~~ig~~~la~~~~~p~~~~~~c~~~~ 153 (296)
.+.|+.+-+.-+.--.+.....-.+...++.+.-|.+.|| .-|.|++..+.+.--+..++.+... +..+.. +
T Consensus 25 ~~L~L~~i~p~sLl~~siygl~~~~~~~~f~~~vG~~iD~-~~Rl~~~~~~l~~Qn~sv~~s~~~~-~~l~~~-~----- 96 (432)
T PF06963_consen 25 VPLFLISIFPGSLLPVSIYGLVRSLSAILFGPWVGRWIDR-SPRLKVIRTSLVVQNLSVAASCALF-LLLLSY-P----- 96 (432)
T ss_pred HHHHHHHHcCCCcHHHHHHHHHHHHHHHHhhHHHHHHHhC-CcchhhHHHHHHHHHHHHHHHHHHH-HHHHhC-C-----
Confidence 4445655544344444444444455666777777888999 6999998888766555444333221 111100 0
Q ss_pred cCcCCCCchhhHHHHHHHHH-HHHhhchhhhhhhhhhhccCC-----CccchhhHHHHHHHHHHHHHHHHHHHHHhhhcc
Q 045564 154 SLCKAPSKVQFAVLYSGIAL-ACLGLGGLRFTLATMGANQFE-----IPQHQGIFFNWFFILTYASTVISSAAFVYIEDN 227 (296)
Q Consensus 154 ~~~~~~~~~~~~~l~~~~~l-~gig~g~~~~~~~~~~ad~f~-----~~~~r~~~f~~~y~~~~iG~~i~p~v~~~l~~~ 227 (296)
.....+ ......+++...+ .++..=...+..-+.--|... ++..+...-+..-=.=-+--++||++.|.+...
T Consensus 97 ~~~~~~-~~~~~~l~~~~~~~~~i~~Las~~~~iavERDWVvvi~~~~~~~La~~NA~mRRIDL~ckllaPl~vG~l~t~ 175 (432)
T PF06963_consen 97 SSSSQS-SWLFIALFALLILLGAIERLASIANTIAVERDWVVVIAGGDPGALARMNATMRRIDLFCKLLAPLFVGLLMTF 175 (432)
T ss_pred cccccc-chHHHHHHHHHHHHHHHHHHHHhhhhheeccchhhhhcCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 000000 1111122222111 111111111222222223322 111111111111100012466899999999887
Q ss_pred ccchhhHHHHHHHHHHHHHH-HHhCCCchhHHHHHHHhcCCC
Q 045564 228 LSWRLGSGLNIAANLAGVVI-FLSGKHFYFPVIVASVKKWKP 268 (296)
Q Consensus 228 ~gw~~~F~i~~~~~~~~~~~-~~~~~~~~~~v~~~~~~~~~~ 268 (296)
.|.+.+..+.++..++++++ ++...+-|.++-....|+++-
T Consensus 176 ~s~~~~~~~i~~~N~~S~~vEy~~l~~VY~~~P~L~~~~~~~ 217 (432)
T PF06963_consen 176 ASPVIAAIFIAGWNLASVFVEYFLLARVYNSVPALAVKKRSS 217 (432)
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHhcCCCCCc
Confidence 88888877777777777766 556667777666445555543
No 252
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=95.51 E-value=1.4 Score=43.38 Aligned_cols=141 Identities=13% Similarity=0.052 Sum_probs=77.8
Q ss_pred HHHHhCCCh-----hHHHHHHHHHHHHHHHH-HHHHHHHhhhhcchHHHHHHHHHHHHHHHHHHHhhccccCCC---CC-
Q 045564 78 MIQEFHITS-----INSALISNIVNGFVNLF-PVLGAIIADSFLGSFQVIWISSFISLLGTILLDSTATFDSLR---PQ- 147 (296)
Q Consensus 78 l~~~lg~s~-----~~a~~i~~~~~~~~~~~-~l~~G~laDr~iGR~~~i~i~~~l~~ig~~~la~~~~~p~~~---~~- 147 (296)
+.+.+.++. ....++-+...+...+. .++-+++++| ++|++.+.+-...+..-.++.++.. .|.-. +.
T Consensus 29 lKD~lvv~~~~~gae~i~fLk~~~~lp~~~~~~~ly~~l~~~-~~~~~lf~~~~~~F~~~f~lF~~vl-~p~~~~~~p~~ 106 (472)
T TIGR00769 29 TKDTLVVTAKGSGAEIIPFLKTWVVVPMAVIFMLIYTKLSNI-LSKEALFYTVISPFLGFFALFAFVI-YPLSDLLHPTA 106 (472)
T ss_pred hhhheeecccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhc-CCHHHhHHHHHHHHHHHHHHHHHHH-hcchhhcCCcH
Confidence 355666632 23344444443443333 7788999999 7999988887766665555544432 33210 00
Q ss_pred ccCCCCcCcCCCC---------chhhHHHHHHHHHHHHhhchhhh-hhhhhhhccCCCccchhhHHHHHHHHHHHHHHHH
Q 045564 148 RCDIGLSLCKAPS---------KVQFAVLYSGIALACLGLGGLRF-TLATMGANQFEIPQHQGIFFNWFFILTYASTVIS 217 (296)
Q Consensus 148 ~c~~~~~~~~~~~---------~~~~~~l~~~~~l~gig~g~~~~-~~~~~~ad~f~~~~~r~~~f~~~y~~~~iG~~i~ 217 (296)
-|++. ....++. .+....+++ ...+-.....+ .-.++.+|.+..+ +-.+.|++++.+.|+|..++
T Consensus 107 ~~~~~-~~~~~~~~~~~i~~~~~W~~~~FYv---~~elw~~~vvS~lFW~fandi~t~~-qakRfy~l~~~ganlg~i~s 181 (472)
T TIGR00769 107 LADKL-LSLLPPGFMGFIAILRIWSFALFYV---MAELWGSVVLSLLFWGFANQITTID-EAKRFYALFGLGANVALIFS 181 (472)
T ss_pred HHHHH-HhhcchhhHHHHHHHhhhhHHHHHH---HHHHHHHHHHHHHHHHHHHhcCCHH-HHHHHHHHHHHHHHHHHHHH
Confidence 00000 0000000 011112221 11222222222 5667889999843 56789999999999999999
Q ss_pred HHHHHhhh
Q 045564 218 SAAFVYIE 225 (296)
Q Consensus 218 p~v~~~l~ 225 (296)
+.+..++.
T Consensus 182 g~~~~~~~ 189 (472)
T TIGR00769 182 GRTIKYFS 189 (472)
T ss_pred HHHHHHHH
Confidence 99888876
No 253
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=95.45 E-value=0.068 Score=51.98 Aligned_cols=149 Identities=12% Similarity=0.006 Sum_probs=80.6
Q ss_pred HhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhcchH----HHHHHHHHHHHHHHHHHHhhcc-ccCCCCCccCCCCcC
Q 045564 81 EFHITSINSALISNIVNGFVNLFPVLGAIIADSFLGSF----QVIWISSFISLLGTILLDSTAT-FDSLRPQRCDIGLSL 155 (296)
Q Consensus 81 ~lg~s~~~a~~i~~~~~~~~~~~~l~~G~laDr~iGR~----~~i~i~~~l~~ig~~~la~~~~-~p~~~~~~c~~~~~~ 155 (296)
-.|.+..+..+...+...++.+|.++||.++|+ +-|. .+.....+....|....+..-. +|..
T Consensus 277 ~~~~~~~~~~ifg~vt~~~G~lGvl~Ggiisd~-~~~~~~~~~~~~~~q~~~~~g~~~s~~~L~~~~~~----------- 344 (493)
T KOG1330|consen 277 LIGFDHNATLIFGGVTCAGGSLGVLFGGIISDK-LSRIFPNSGTLRASQLSAALGAPLSIPFLFLFPAF----------- 344 (493)
T ss_pred HhCCccccchhhhhHHHhhchhhheehHHHHHH-HHHhcccccchhHHHHHHhhhhhHHHHHHHHHHhh-----------
Confidence 345566677788889999999999999999999 3331 2333333333332222111100 1110
Q ss_pred cCCCCchhhHHHHHHHHHHHH-hhchhhhhhhhhhhccCCCccchhhHHHHHHHHHH-HHHHHHHHHHHhhhccc-cch-
Q 045564 156 CKAPSKVQFAVLYSGIALACL-GLGGLRFTLATMGANQFEIPQHQGIFFNWFFILTY-ASTVISSAAFVYIEDNL-SWR- 231 (296)
Q Consensus 156 ~~~~~~~~~~~l~~~~~l~gi-g~g~~~~~~~~~~ad~f~~~~~r~~~f~~~y~~~~-iG~~i~p~v~~~l~~~~-gw~- 231 (296)
......+...+++.|+ ..-..++.......+..|++ +|.+++++-++..- .|-.-+|.+.|.+.|+. ||+
T Consensus 345 -----~~~s~~~~~il~~~g~~~~~~~~a~n~~i~l~vV~p~-~Rt~a~a~~~~~~h~fgd~~~p~ivGilsd~l~g~~~ 418 (493)
T KOG1330|consen 345 -----TSSSMIFGLILFLVGETISWFNWATNNPIFLEVVPPS-RRTTAYALDTVFEHIFGDAASPYIVGILSDKLRGYKP 418 (493)
T ss_pred -----hhHHHHHHHHHHHHHHHHHhcccccccceeeEecCcc-cccHHHHHHHHHHHHhccCCCcceehhHHHHhhCCCc
Confidence 0011122222333332 22223344555566777744 78999999555444 45555566889888764 666
Q ss_pred ---------hhHHHHHHHHHHHHHH
Q 045564 232 ---------LGSGLNIAANLAGVVI 247 (296)
Q Consensus 232 ---------~~F~i~~~~~~~~~~~ 247 (296)
-....+++..+.+...
T Consensus 419 ~~~~~~~~~~s~~~~a~~l~~a~~~ 443 (493)
T KOG1330|consen 419 AGGIDSVLQTSLRLCAALLAKALIW 443 (493)
T ss_pred cccccccccchhhhhHHHHHHHHHH
Confidence 2344555555544443
No 254
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=94.41 E-value=1.4 Score=43.36 Aligned_cols=159 Identities=13% Similarity=0.035 Sum_probs=97.0
Q ss_pred hHHHHHHHHHHHhCCC----hhHHHHHHHHHHHHHHHHHHHHHHHhhhhcchH-------HHHHHHHHHHHHHHHHHHhh
Q 045564 70 WVANLMVYMIQEFHIT----SINSALISNIVNGFVNLFPVLGAIIADSFLGSF-------QVIWISSFISLLGTILLDST 138 (296)
Q Consensus 70 ~~~~l~~yl~~~lg~s----~~~a~~i~~~~~~~~~~~~l~~G~laDr~iGR~-------~~i~i~~~l~~ig~~~la~~ 138 (296)
..+.+..|..+..+.+ .....+..+...+...+..++..++--+ +||+ .-+-++..+...+.+++..+
T Consensus 303 ~~ssl~~~a~~~v~~~~~g~~vp~~~fQslNp~~Iii~~pI~a~l~~~-l~~~~~~ps~~~KFalGl~l~g~~fl~l~~~ 381 (498)
T COG3104 303 MGSSLNLYADRNVNRQIFGFEVPPAWFQSLNPFFIILFSPILAALWTK-LGRGNKQPSTPIKFALGLILAGLGFLILLLA 381 (498)
T ss_pred ccchHHHHHHHhhcccccceecCHHHHHhhCHHHHHHHHHHHHHHHhH-hhcCCCCCCcchHHHHHHHHHHHHHHHHHHH
Confidence 4455566665543332 1233455666666666677777777666 4544 24666777777777766655
Q ss_pred ccccCCCCCccCCCCcCcCCCCchhhHHHHHHHHHHHHhhchhhhhhhhhhhccCCCccchhhHHHHHHHHHHHHHHHHH
Q 045564 139 ATFDSLRPQRCDIGLSLCKAPSKVQFAVLYSGIALACLGLGGLRFTLATMGANQFEIPQHQGIFFNWFFILTYASTVISS 218 (296)
Q Consensus 139 ~~~p~~~~~~c~~~~~~~~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~~~ad~f~~~~~r~~~f~~~y~~~~iG~~i~p 218 (296)
... .- ++++..+.+.++.+.++.++|.=...|...++++.+-|++ -.+..++.+.+....|..++.
T Consensus 382 ~~~-~~------------~~~~~~s~~~lil~y~l~s~gEL~iSpvGLs~~t~laP~~-~~s~~ma~wfLt~a~~~~l~g 447 (498)
T COG3104 382 GIW-FG------------GPSGLVSVWWLVLSYVLQSFGELFISPVGLSMVTKLAPPA-LKSFIMAMWFLTVAAGQTLGG 447 (498)
T ss_pred HHh-hc------------CCCCCcCHHHHHHHHHHHHHHHHHhCHHHHHHHHHhChHH-HHHHHHHHHHHHHHHHHHhhc
Confidence 211 00 0011134567778888999999999999999999999943 566677777777777777766
Q ss_pred HHHHh------hhccccchhhHHHHHHHHHH
Q 045564 219 AAFVY------IEDNLSWRLGSGLNIAANLA 243 (296)
Q Consensus 219 ~v~~~------l~~~~gw~~~F~i~~~~~~~ 243 (296)
.+++. ..+.......|+..+....+
T Consensus 448 ~va~~~~~~~~~~~~~~~~~~F~~~g~v~i~ 478 (498)
T COG3104 448 QVAGLTAVTDPAYTAFIEGRVFGTIGVVAIV 478 (498)
T ss_pred eecccccccchhhhhhhhhhhHHHHHHHHHH
Confidence 55552 12223445566665554433
No 255
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=94.35 E-value=0.049 Score=53.91 Aligned_cols=62 Identities=15% Similarity=0.206 Sum_probs=47.3
Q ss_pred hHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhcchHHHHHHH-HHHHHHHHH
Q 045564 70 WVANLMVYMIQEFHITSINSALISNIVNGFVNLFPVLGAIIADSFLGSFQVIWIS-SFISLLGTI 133 (296)
Q Consensus 70 ~~~~l~~yl~~~lg~s~~~a~~i~~~~~~~~~~~~l~~G~laDr~iGR~~~i~i~-~~l~~ig~~ 133 (296)
+...+++|. +.+|+++.+.+.++..--++.++..|+.|++|||+ =++|.++++ .+......+
T Consensus 30 l~pll~vy~-kQLGl~p~~~Gtl~g~~P~v~~L~~P~~g~~Adr~-r~~r~lllgsl~~~v~a~f 92 (618)
T KOG3762|consen 30 LFPLLAVYF-KQLGLNPAVVGTLTGTLPLVEFLAAPLWGFLADRY-RKRRPLLLGSLLLSVTATF 92 (618)
T ss_pred cchHHHHHH-HHcCCCHHHhhhhhhHHHHHHHHhHHHHHHHHHHH-HhcCchhHHHHHHHHHHHH
Confidence 445566666 57999999999999999999999999999999995 555544444 444444333
No 256
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=94.32 E-value=4.3 Score=39.85 Aligned_cols=119 Identities=13% Similarity=0.061 Sum_probs=72.3
Q ss_pred HHHHHHHHHHHHHHHhhhh--cchHHHHHHHHHHHHHHHHHHHhhccccCCCCC-ccCCCCcCcCCCCchhhHHHHHHHH
Q 045564 96 VNGFVNLFPVLGAIIADSF--LGSFQVIWISSFISLLGTILLDSTATFDSLRPQ-RCDIGLSLCKAPSKVQFAVLYSGIA 172 (296)
Q Consensus 96 ~~~~~~~~~l~~G~laDr~--iGR~~~i~i~~~l~~ig~~~la~~~~~p~~~~~-~c~~~~~~~~~~~~~~~~~l~~~~~ 172 (296)
-..+..++.++.+.+++|. +||++++.++.++..++.++.-+. .|.-.+- +-++. +.... ......++.-+
T Consensus 288 ~g~g~v~~g~~~~~l~~rir~fg~~~~~~~~~~~~~~~~~li~l~--~p~dap~~~t~~~-~~~~~---~~~~~~~ii~~ 361 (461)
T KOG3098|consen 288 IGLGEVIGGLDFSILSKRIRGFGRKPTVLIGIIIHLIGFLLIHLS--FPNDAPLRPTDSP-PLLFT---PSYYLALIIGF 361 (461)
T ss_pred HhHHHHHHHHHHHHHhhhhhhcccCcchhHHHHHHHHHHHHHhcc--ccccCCCCCCccc-ccccc---cchhHHHHHHH
Confidence 3344555566667776552 699999999999988877765554 3432210 00000 00001 12334455557
Q ss_pred HHHHhhchhhhhhhhhhhccCCCccchhhHHHHHHHHHHHHHHHHHHHHH
Q 045564 173 LACLGLGGLRFTLATMGANQFEIPQHQGIFFNWFFILTYASTVISSAAFV 222 (296)
Q Consensus 173 l~gig~g~~~~~~~~~~ad~f~~~~~r~~~f~~~y~~~~iG~~i~p~v~~ 222 (296)
+.|++-+......+.++++.+|+ +|..+|+++-+-..++..++.....
T Consensus 362 l~G~~D~~~~t~~~~ii~~~~~~--~~~~~fsi~kfyq~~~s~v~~f~~~ 409 (461)
T KOG3098|consen 362 LLGFGDACFNTQRYVIIALLYPD--DRAQAFSLFKFYQSVASCVAFFFSP 409 (461)
T ss_pred HHhhHHHHHHHHHHHHHHHHhcC--chHHHHHHHHHHHHHHHHHHhhhhh
Confidence 88889889999999999999974 3677787755555555554444333
No 257
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=94.23 E-value=3.6 Score=40.05 Aligned_cols=132 Identities=14% Similarity=0.084 Sum_probs=91.7
Q ss_pred HHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhcchHHHHHHHHHHHHHHHHHHHhhccccCCCCCccCC
Q 045564 72 ANLMVYMIQEFHITSINSALISNIVNGFVNLFPVLGAIIADSFLGSFQVIWISSFISLLGTILLDSTATFDSLRPQRCDI 151 (296)
Q Consensus 72 ~~l~~yl~~~lg~s~~~a~~i~~~~~~~~~~~~l~~G~laDr~iGR~~~i~i~~~l~~ig~~~la~~~~~p~~~~~~c~~ 151 (296)
..+..|+... |++....+..-+...+....+..+..++-+| +|--|+=.++......+..+...+.+.|.-
T Consensus 279 ~lmt~yl~~~-G~s~~~igi~R~~gav~Gl~gT~~~p~l~~r-iGlvr~G~~~l~~q~~~L~~~v~~~~~~~~------- 349 (432)
T PF06963_consen 279 GLMTAYLKSQ-GYSPSVIGIFRGLGAVFGLLGTWVYPWLMKR-IGLVRAGLWSLWWQWVCLALCVVSFWAPGS------- 349 (432)
T ss_pred HHHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hcchhhHHHHHHHHHHHHHHHHHHHhcCCC-------
Confidence 4466788766 9999999999999999999999999999999 799999888888776655554444322211
Q ss_pred CCcCcCCC-CchhhHHHHHHHHHHHHhhchhhhhhhhhhhccCCCccchhhHHHHHHHHHHHHHHHHHHH
Q 045564 152 GLSLCKAP-SKVQFAVLYSGIALACLGLGGLRFTLATMGANQFEIPQHQGIFFNWFFILTYASTVISSAA 220 (296)
Q Consensus 152 ~~~~~~~~-~~~~~~~l~~~~~l~gig~g~~~~~~~~~~ad~f~~~~~r~~~f~~~y~~~~iG~~i~p~v 220 (296)
+ +..+...++.+.++-=+|.=+..-+..-++-|..|++ +|+...+.-+-..++.-++...+
T Consensus 350 -------~~~~~s~~~l~~gi~~SR~GLW~fDL~~~qi~Qe~V~~~-~Rg~v~gvq~sl~~lf~ll~~~~ 411 (432)
T PF06963_consen 350 -------PFSSISAYLLLGGIALSRIGLWSFDLAVTQIMQENVPES-ERGAVSGVQNSLQSLFELLSFVL 411 (432)
T ss_pred -------CchhhHHHHHHHHHHHHHHHHHhhhHHHHHhhcccCCHH-HhhHHHHHHHHHHHHHHHHHHHH
Confidence 1 1123444555544444565566667777777888744 78998888665666666665433
No 258
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=94.00 E-value=0.015 Score=58.05 Aligned_cols=155 Identities=15% Similarity=0.182 Sum_probs=0.0
Q ss_pred hHHHhHHHHHHHHHHHhCCChhHHHHHHHHHHH-HHHHHHHHHHHHhhhh-cchHHHHHHHHHHHHHHHHHHHhhccccC
Q 045564 66 LGEGWVANLMVYMIQEFHITSINSALISNIVNG-FVNLFPVLGAIIADSF-LGSFQVIWISSFISLLGTILLDSTATFDS 143 (296)
Q Consensus 66 ~~y~~~~~l~~yl~~~lg~s~~~a~~i~~~~~~-~~~~~~l~~G~laDr~-iGR~~~i~i~~~l~~ig~~~la~~~~~p~ 143 (296)
..-|..+++|-|++.++++++.++..+..+..+ +..+|.++||++..|+ ++.|+.+.+..+...++.+...... +
T Consensus 320 ~~~G~~tF~pKylE~QF~~sas~A~~l~G~v~ip~~~~G~llGG~ivkk~kl~~~~~~~~~~v~~~v~~~~~~~~~-~-- 396 (539)
T PF03137_consen 320 IVSGFATFLPKYLESQFGLSASQASLLTGIVSIPGAALGILLGGYIVKKFKLSARGAAKFCIVVSIVSVILYSPLF-F-- 396 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHHhCCCHHHHHHHHhhhhcchhheehheEEEEEEEecCcHHHHHHHHHHHHHHHHHHHHHHH-e--
Confidence 566678999999999999999999887765444 7788999999999994 3456666665555554443311110 0
Q ss_pred CCCCccCCC-------------------------------------CcCcCCCCchhhHHHHHHHHHHHHhhchhhhhhh
Q 045564 144 LRPQRCDIG-------------------------------------LSLCKAPSKVQFAVLYSGIALACLGLGGLRFTLA 186 (296)
Q Consensus 144 ~~~~~c~~~-------------------------------------~~~~~~~~~~~~~~l~~~~~l~gig~g~~~~~~~ 186 (296)
..|++- .+.|..+=...+..|++..++..+..+.......
T Consensus 397 ---~~C~~~~~aGv~~~y~~~~~~~~~~~~~~~Cn~~~~~~~~~a~~G~C~~~C~~~~~~Fl~~~~~~~~~~~~~~~p~~ 473 (539)
T PF03137_consen 397 ---LGCPNPPIAGVTVPYHNSTSSSPSCNLTCSCNSCCSSGNGSATPGKCPSDCCNKLIPFLILLFILSFFTFMSQVPST 473 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ---ecCCCCceeeecCccccccCCCCCCCCCCCCCCccCCCcccccCCCcCcccccccHHHHHHHHHHHHHHHhcccchh
Confidence 112111 1122211011234455555554444444444344
Q ss_pred hhhhccCCCccchhhHHHHHHHHH-HHHHHHHHHHHHhhhcc
Q 045564 187 TMGANQFEIPQHQGIFFNWFFILT-YASTVISSAAFVYIEDN 227 (296)
Q Consensus 187 ~~~ad~f~~~~~r~~~f~~~y~~~-~iG~~i~p~v~~~l~~~ 227 (296)
...-+..| ++.|.-+.++..+.. -+|.+-||++-|++.|.
T Consensus 474 ~i~LR~V~-~~~rs~AlGv~~~~~rllg~IPgPIifG~iiD~ 514 (539)
T PF03137_consen 474 LITLRCVP-PEQRSFALGVQWLIIRLLGFIPGPIIFGAIIDS 514 (539)
T ss_dssp ------------------------------------------
T ss_pred eeeeccCC-hhhcchhhhHHHHHHHhhcCcchHHHHhHHHhh
Confidence 44445565 336777777744433 46788899999999885
No 259
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=92.96 E-value=1.2 Score=42.80 Aligned_cols=155 Identities=15% Similarity=0.103 Sum_probs=83.1
Q ss_pred ccCCchhHHHHHHHHH-H-hHHHhHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhh-----hhcchHHHH
Q 045564 49 KRGGRTALLSRTVTCL-T-LGEGWVANLMVYMIQEFHITSINSALISNIVNGFVNLFPVLGAIIAD-----SFLGSFQVI 121 (296)
Q Consensus 49 ~~~~~~~~~~l~~~~~-~-~~y~~~~~l~~yl~~~lg~s~~~a~~i~~~~~~~~~~~~l~~G~laD-----r~iGR~~~i 121 (296)
.++.++.+..+.+... . .-+|... ..+++-+.-|.|-++.+.....+ .-+-.-++.+++.| | +||||.-
T Consensus 26 ~~~d~~~illLl~LYllQGiP~GL~~-~iP~lL~ak~vSyt~~a~fS~ay--~P~sLKllWaPiVDs~y~k~-~GrrksW 101 (510)
T KOG3574|consen 26 LKGDRSSILLLLFLYLLQGIPLGLIG-AIPLLLQAKGVSYTSQAIFSFAY--WPFSLKLLWAPIVDSVYSKR-FGRRKSW 101 (510)
T ss_pred hhhhhhhHHHHHHHHHHcCCchhHhh-hhHHHhcCCCcchhhhhhhhhhh--hHHHHHHHHHhhhHHHHHHh-hccccce
Confidence 4566777777777777 5 7777777 44455556677766643322211 12234567888889 8 8999975
Q ss_pred HHHHHHHHHHHHHHHhhccccCCCCCccCCCCcCc-CCCCchhhHHHHHHHHHHHHhhchhhhhhhhhhhccCCCccchh
Q 045564 122 WISSFISLLGTILLDSTATFDSLRPQRCDIGLSLC-KAPSKVQFAVLYSGIALACLGLGGLRFTLATMGANQFEIPQHQG 200 (296)
Q Consensus 122 ~i~~~l~~ig~~~la~~~~~p~~~~~~c~~~~~~~-~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~~~ad~f~~~~~r~ 200 (296)
++-+ -+.+|..++.++-..+-. .. ++.. .+...+-...+++-++.+...-.+-+..-.+.. ++..+
T Consensus 102 vvp~-q~llG~~mllLs~~v~~~----------~g~ng~~-p~v~~lt~~f~LLnflaAtQDIAVDgwALtmLs-~e~lg 168 (510)
T KOG3574|consen 102 VVPC-QYLLGLFMLLLSYLVDRG----------LGGNGGL-PNVVALTLLFLLLNFLAATQDIAVDGWALTMLS-RENLG 168 (510)
T ss_pred eeeh-HHHHHHHHHHHhhCCCcc----------cccCCCC-cchHHHHHHHHHHHHHHhhhhhhhhHHHHHhcC-HhhcC
Confidence 5532 223344444444311111 11 1111 122222223345556666655555555555554 44455
Q ss_pred hHHHHHHHHHHHHHHHHHHH
Q 045564 201 IFFNWFFILTYASTVISSAA 220 (296)
Q Consensus 201 ~~f~~~y~~~~iG~~i~p~v 220 (296)
.+-....++.+.|.+++..+
T Consensus 169 yaST~q~Vg~~~GyfL~~~i 188 (510)
T KOG3574|consen 169 YASTCQSVGQTAGYFLGNVV 188 (510)
T ss_pred chhHHHHHHHhhhHHhhcce
Confidence 55555566677777766543
No 260
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=91.18 E-value=0.49 Score=46.57 Aligned_cols=195 Identities=13% Similarity=0.004 Sum_probs=96.1
Q ss_pred CCchhHHHHHHHHH--H-hHHHhHHHHHHHHHHHhCCChhHHHHHHHHHHH--HHHHHHHHHHHHhhhhcch---HHHHH
Q 045564 51 GGRTALLSRTVTCL--T-LGEGWVANLMVYMIQEFHITSINSALISNIVNG--FVNLFPVLGAIIADSFLGS---FQVIW 122 (296)
Q Consensus 51 ~~~~~~~~l~~~~~--~-~~y~~~~~l~~yl~~~lg~s~~~a~~i~~~~~~--~~~~~~l~~G~laDr~iGR---~~~i~ 122 (296)
-.|+..+.++...+ . .+..+.+-.+......++++..++....++... +.....+...+..-| +|+ |+.+.
T Consensus 259 ~d~~~~~vc~~~~~~~~~~~~~iet~~~~~~m~~y~w~~~~av~~~gi~~~~~g~ls~~~~l~~~f~~-l~~i~~r~~~~ 337 (488)
T KOG2325|consen 259 LDWVAVLVCIFLRFVVNFIATTIETLSSALTMVMYGWTGSEAVLYNGITLSISGILSVILLLLYIFTR-LGKIDKRRIIL 337 (488)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHhccccchHHHhhhhHHHHHHHHHHHHHHHHHHHH-hhhhccceeee
Confidence 34555555555444 3 444434444455555677766665443333222 222223333444445 343 45555
Q ss_pred HHHHHHHHHHHHHHhhc-c--ccCCC-----CCccCCCCcCcCCCCchhhHHHHHHH-HHHHHhhchhhhhhhhhhhccC
Q 045564 123 ISSFISLLGTILLDSTA-T--FDSLR-----PQRCDIGLSLCKAPSKVQFAVLYSGI-ALACLGLGGLRFTLATMGANQF 193 (296)
Q Consensus 123 i~~~l~~ig~~~la~~~-~--~p~~~-----~~~c~~~~~~~~~~~~~~~~~l~~~~-~l~gig~g~~~~~~~~~~ad~f 193 (296)
++.++....+.+...+- + .|... .-+|.+..+-|....-.+...++++. ++.|++.-.+.....+..+++.
T Consensus 338 ~g~l~~f~~~~i~~yp~~~~s~pv~~~~~~~~~~~~~~y~wc~~~~~v~~~~~l~~~i~~~g~~~P~~~~~~~tlySkiL 417 (488)
T KOG2325|consen 338 LGFLIFFLSYYIFTYPWGFYSGPVQPYNTTYAGCDFEEYSWCDTTTAVPLILYLISFIVVFGIAFPFISTALDTLYSKIL 417 (488)
T ss_pred ehHHHHHHhhheeeeeccccccccccccccccCcCcccchhhccCcccChhhheeehhheeccccccccchHHHHHHHHh
Confidence 55444333333222220 0 01100 00111111223222222333444442 3344555555566777778888
Q ss_pred CCccchhhHHHHHHHHHHHHHHHHHHHHHhhhccccchhhHHHHHHHHHHHHHH
Q 045564 194 EIPQHQGIFFNWFFILTYASTVISSAAFVYIEDNLSWRLGSGLNIAANLAGVVI 247 (296)
Q Consensus 194 ~~~~~r~~~f~~~y~~~~iG~~i~p~v~~~l~~~~gw~~~F~i~~~~~~~~~~~ 247 (296)
.++ ..+..-+++.+...++-.+||+....+-..+|.++...+.....++...+
T Consensus 418 gp~-~q~~~qg~~~~~~s~~~~~~~~~~t~~~~~~g~~~v~~~~~~~~l~~~~l 470 (488)
T KOG2325|consen 418 GPR-DQGTMQGVFSISGSIARVVGPIFSTAIFTLSGPRPVWIILLCLLLVVAAL 470 (488)
T ss_pred CCc-cccceeEEEEeccchhhhhhHHHHhhhHHhcCccHHHHHHHHHHHHHHHH
Confidence 633 34555555667778888899999888887788887766666554444433
No 261
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=91.12 E-value=2.1 Score=41.96 Aligned_cols=88 Identities=14% Similarity=-0.012 Sum_probs=66.5
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhcchHHHHHHHHHHHHHHHHHHHhhccccCCCCCccCCCCcCcCCCCchhhHHHHHHH
Q 045564 92 ISNIVNGFVNLFPVLGAIIADSFLGSFQVIWISSFISLLGTILLDSTATFDSLRPQRCDIGLSLCKAPSKVQFAVLYSGI 171 (296)
Q Consensus 92 i~~~~~~~~~~~~l~~G~laDr~iGR~~~i~i~~~l~~ig~~~la~~~~~p~~~~~~c~~~~~~~~~~~~~~~~~l~~~~ 171 (296)
...+-.....++.++++.+-|. +|.|..+.++...+..-.+..... +...++.+-
T Consensus 55 ~~aiiY~~ftv~~l~~psiv~~-i~~K~~lv~ga~~y~~f~~gfl~~------------------------N~y~~yfss 109 (461)
T KOG3098|consen 55 GQAIIYAFFTVSCLFAPSIVNF-LGPKWALVIGATCYAAFPLGFLFP------------------------NSYYLYFSS 109 (461)
T ss_pred HHHHHHHHHHHHHHhhHHHHHH-hhHHHHHHHHhHHHHHHHHHHHhc------------------------chHHHHHHH
Confidence 3666667788889999999999 799999999999887633322111 236788899
Q ss_pred HHHHHhhchhhhhhhhhhhccCCCccchhhHHHH
Q 045564 172 ALACLGLGGLRFTLATMGANQFEIPQHQGIFFNW 205 (296)
Q Consensus 172 ~l~gig~g~~~~~~~~~~ad~f~~~~~r~~~f~~ 205 (296)
+++|+|.+..+.....++++-.. ++.+.+..++
T Consensus 110 allG~Gaallw~GqG~ylt~~st-~~tie~Nisi 142 (461)
T KOG3098|consen 110 ALLGFGAALLWTGQGGYLTSNST-RETIERNISI 142 (461)
T ss_pred HHhhhhHHheecccceehhhcCC-hhhHHHHHHH
Confidence 99999999999999999998776 3344444443
No 262
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=90.44 E-value=7 Score=40.17 Aligned_cols=131 Identities=13% Similarity=-0.004 Sum_probs=95.0
Q ss_pred hCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhcchHHHHHHHHHHHHHHHHHHHhhccccCCCCCccCCCCcCcCCCCc
Q 045564 82 FHITSINSALISNIVNGFVNLFPVLGAIIADSFLGSFQVIWISSFISLLGTILLDSTATFDSLRPQRCDIGLSLCKAPSK 161 (296)
Q Consensus 82 lg~s~~~a~~i~~~~~~~~~~~~l~~G~laDr~iGR~~~i~i~~~l~~ig~~~la~~~~~p~~~~~~c~~~~~~~~~~~~ 161 (296)
.+...........++.....+..+.....+|-.-|+...+..-.+..+++.+...+.+ ++. .+..
T Consensus 15 ~~~lg~~~~~A~~i~~~f~~l~yl~pilGg~iAD~~lG~~~tIl~~~ii~~lG~~lla-i~a--------------~~~~ 79 (654)
T TIGR00926 15 LNFLGFSESTSTVLFHTFTYLCYLTPLIGAIIADGWLGKFKTILYLSIVYVVGHALLS-FGA--------------IPSS 79 (654)
T ss_pred HHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHH-hcc--------------Cccc
Confidence 3444456677889999999999999999999987888888888888888777666543 211 0111
Q ss_pred hhhHHHHHHHHHHHHhhchhhhhhhhhhhccCCCccch--hhHHHHHHHHHHHHHHHHHHHHHhhhccc
Q 045564 162 VQFAVLYSGIALACLGLGGLRFTLATMGANQFEIPQHQ--GIFFNWFFILTYASTVISSAAFVYIEDNL 228 (296)
Q Consensus 162 ~~~~~l~~~~~l~gig~g~~~~~~~~~~ad~f~~~~~r--~~~f~~~y~~~~iG~~i~p~v~~~l~~~~ 228 (296)
.......++.+.++++.++..++.+.+.+++++.-..+ .+..++|++..+.+. +|.+++..+....
T Consensus 80 ~~~~~~~~~l~gLaLia~G~GgiKp~vsaf~gdqf~~~~~~~~~s~F~~fY~~iN-iGSlis~~i~~~l 147 (654)
T TIGR00926 80 GHPLHDLLDLLGLALIALGTGGIKPCVSAFGGDQFEERQLSLRSRFFSFFYFAIN-AGSLISTIITPIL 147 (654)
T ss_pred ccchHHHHHHHHHHHHHhhccccccCchhhhHhhcCccchhHHHHHHHHHHHHHH-HHHHHHHHHHHHH
Confidence 11233455677788899999999999999999755443 358888999888776 4567777776544
No 263
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=87.10 E-value=5.7 Score=36.65 Aligned_cols=78 Identities=12% Similarity=0.012 Sum_probs=52.8
Q ss_pred HHHHHHHHHhhchhhhhhhhhhhccCCCccchhhHHHHHHHHHHHHHHHHHHHHHhhhccccchhhHHHHHHHHHHHHH
Q 045564 168 YSGIALACLGLGGLRFTLATMGANQFEIPQHQGIFFNWFFILTYASTVISSAAFVYIEDNLSWRLGSGLNIAANLAGVV 246 (296)
Q Consensus 168 ~~~~~l~gig~g~~~~~~~~~~ad~f~~~~~r~~~f~~~y~~~~iG~~i~p~v~~~l~~~~gw~~~F~i~~~~~~~~~~ 246 (296)
+++-.+.-...|..+|.+.-+-.+..|++ .|.+.+|||-+..|+-.-++-...---....+-|..|.++.+.+.++.+
T Consensus 348 ~i~F~~~E~cvGlfwPSimkmRsqyIPEe-arstimNfFRvPLnifvClvLynlh~~~~p~~tr~mf~icS~~~~~a~i 425 (454)
T KOG4332|consen 348 LIGFCLFEACVGLFWPSIMKMRSQYIPEE-ARSTIMNFFRVPLNIFVCLVLYNLHVDAFPTTTRNMFGICSAFLFVASI 425 (454)
T ss_pred HHHHHHHHHHHhhcchHHHHHHHhhCCHH-HHhhhhhheechhhHhhhhhheecccccCccccchhhhhhHHHHHHHHH
Confidence 44545666778889999988888888854 6899999998888876554322111001124567789998887766654
No 264
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=86.01 E-value=2.7 Score=43.45 Aligned_cols=70 Identities=19% Similarity=0.250 Sum_probs=52.8
Q ss_pred H-hHHHhHHHHHHHHHHHhCCChhHHHHHH-HHHHHHHHHHHHHHHHHhhhh-cchHHHHHHHHHHHHHHHHH
Q 045564 65 T-LGEGWVANLMVYMIQEFHITSINSALIS-NIVNGFVNLFPVLGAIIADSF-LGSFQVIWISSFISLLGTIL 134 (296)
Q Consensus 65 ~-~~y~~~~~l~~yl~~~lg~s~~~a~~i~-~~~~~~~~~~~l~~G~laDr~-iGR~~~i~i~~~l~~ig~~~ 134 (296)
. .+-|..+++|-|+.+.+|.+...|..+. .+...+..+|.++||++.-|+ +.-|.+..+..+...+.++.
T Consensus 405 ~~~~~G~~tFlPKyLE~Qfg~sas~An~l~G~i~vp~~~~Gi~lGG~iikkfkl~~r~~a~~~~~~~~l~l~~ 477 (735)
T KOG3626|consen 405 SLAITGYITFLPKYLETQFGISASLANILTGSIGVPAAAVGIFLGGLIIKKFKLSARGAAKFVIVCSVLSLLF 477 (735)
T ss_pred HHHHhhHHHhhHHHHHHHcCCCHHHHHHHhhhhhhhhhhhhhhccceeeeeecccHHHHHHHHHHHHHHHHHH
Confidence 5 7778899999999999999999999877 455567788899999999984 34555555555544444433
No 265
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=83.37 E-value=7.1 Score=38.49 Aligned_cols=70 Identities=13% Similarity=0.069 Sum_probs=52.0
Q ss_pred HHHhhchhhhhhhhhhhccCCCccchhhHHHHHHHHHHHHHHHHHHHHHhhhccccchhhHHHHHHHHHH
Q 045564 174 ACLGLGGLRFTLATMGANQFEIPQHQGIFFNWFFILTYASTVISSAAFVYIEDNLSWRLGSGLNIAANLA 243 (296)
Q Consensus 174 ~gig~g~~~~~~~~~~ad~f~~~~~r~~~f~~~y~~~~iG~~i~p~v~~~l~~~~gw~~~F~i~~~~~~~ 243 (296)
.++........--..+.+++|++..|...++-+....++..++..++.+.+.+..||...-.+.-+++++
T Consensus 276 y~~~~nlve~~~k~~v~~~~p~~~~~~~f~g~~~~~~gi~tl~~~l~~~~l~~~~Gw~~~a~i~Pii~li 345 (472)
T TIGR00769 276 YGISINLVEVTWKSKLKAQYPSPNEYSAFMGDFSTWTGVVSVTMMLLSGNVIRKYGWLTAALITPLVMLL 345 (472)
T ss_pred HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 3344445556666778899998888999999988888888866666679999999999776665544434
No 266
>KOG3097 consensus Predicted membrane protein [Function unknown]
Probab=80.66 E-value=25 Score=33.23 Aligned_cols=140 Identities=15% Similarity=0.062 Sum_probs=75.8
Q ss_pred cCCchhHHHHHHHHH-H-hHHHhHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhcchHHHHHHHHHH
Q 045564 50 RGGRTALLSRTVTCL-T-LGEGWVANLMVYMIQEFHITSINSALISNIVNGFVNLFPVLGAIIADSFLGSFQVIWISSFI 127 (296)
Q Consensus 50 ~~~~~~~~~l~~~~~-~-~~y~~~~~l~~yl~~~lg~s~~~a~~i~~~~~~~~~~~~l~~G~laDr~iGR~~~i~i~~~l 127 (296)
++.-|.+..+-...+ . ..|.-..++.+.....+|..+..+ ....-....++.+.+-.+ +|-|.++.++...
T Consensus 25 ~~~~knv~i~s~~fl~~f~a~~gl~nlq~~vn~~lg~~sl~~------~y~~l~~s~m~~~~~Ir~-~g~K~tm~lav~~ 97 (390)
T KOG3097|consen 25 LGILKNVLILSIAFLLTFTAYLGLQNLQTSVNYDLGTVSLGA------LYLSLIDSSMFMPLLIRF-LGTKWTMVLAVFP 97 (390)
T ss_pred cchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhcCcccchhhh------hhHHHHHHHHHHHHHHHH-HhhHHHHHHHHHH
Confidence 344455544444333 4 556666777777665544322111 112223333444455555 8999999998887
Q ss_pred HHHHHHHHHhhccccCCCCCccCCCCcCcCCCCchhhHHHHHHHHHHHHhhchhhhhhhhhhhccCCC-ccch-------
Q 045564 128 SLLGTILLDSTATFDSLRPQRCDIGLSLCKAPSKVQFAVLYSGIALACLGLGGLRFTLATMGANQFEI-PQHQ------- 199 (296)
Q Consensus 128 ~~ig~~~la~~~~~p~~~~~~c~~~~~~~~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~~~ad~f~~-~~~r------- 199 (296)
+..-.. ....| ..-.+..+-...|+|.+..++...+++++.-.. .+.|
T Consensus 98 Y~lyiA----~Nl~p--------------------r~~tlVPa~~~~G~aa~p~W~SkgtYlT~~g~~ya~~~~~q~~~~ 153 (390)
T KOG3097|consen 98 YALYIA----ANLEP--------------------RYETLVPAGLVLGMAAGPIWASKGTYLTPMGQNYANQRGEQAGDG 153 (390)
T ss_pred HHHHHH----hhcch--------------------hHHhhccHHHhhccccccccccCcceecHHHHHHHHhhhhhccCc
Confidence 765221 22122 123345555677888888888777777765430 0112
Q ss_pred ------hhHHHHHHHHHHHHHHHHHHH
Q 045564 200 ------GIFFNWFFILTYASTVISSAA 220 (296)
Q Consensus 200 ------~~~f~~~y~~~~iG~~i~p~v 220 (296)
+-+|.+++.+.-+|..++.++
T Consensus 154 ~~~~ffg~Ffii~~~~qv~gn~issli 180 (390)
T KOG3097|consen 154 MKVRFFGEFFIIFQCAQVWGNLISSLI 180 (390)
T ss_pred eeeeehhHHHHHHHHHHHHHHHHHHHH
Confidence 334455565656665555544
No 267
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=76.42 E-value=47 Score=32.11 Aligned_cols=136 Identities=9% Similarity=-0.027 Sum_probs=74.9
Q ss_pred HHHhC---CChhHHHHHHHHHHHHHHHHHHHHHHHhhhhcchHHHHHHHHHHHHHHHHHHHhhccccCCCCCccCCCCcC
Q 045564 79 IQEFH---ITSINSALISNIVNGFVNLFPVLGAIIADSFLGSFQVIWISSFISLLGTILLDSTATFDSLRPQRCDIGLSL 155 (296)
Q Consensus 79 ~~~lg---~s~~~a~~i~~~~~~~~~~~~l~~G~laDr~iGR~~~i~i~~~l~~ig~~~la~~~~~p~~~~~~c~~~~~~ 155 (296)
++.++ +++...+.+..+..++..++..+....--+ ..-|+++.+..++..+..+.-.+. ..-.. .+ .
T Consensus 244 ~~~~~gp~fs~~f~~~~~~vg~~~~l~g~~~y~~~~~~-~~~R~~~~~t~~~~~~~~l~~~~l--v~~~n----~~---~ 313 (433)
T PF03092_consen 244 TDALGGPHFSPSFYGTLSIVGSIASLLGILLYRKYFSN-WSWRRIFVVTTLVSVLASLFDLLL--VTRWN----LD---L 313 (433)
T ss_pred eccccccccCHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CCHHHHHHHHHHHHHHHhcccEEE--EEEEe----ee---e
Confidence 34455 777776666666666666666555443333 255677766666554422211100 00000 00 0
Q ss_pred cCCCCchhhHHHHHHHHHHHHhhchhhhhhhhhhhccCCCccchhhHHHHHHHHHHHHHHHHHHHHHhhhcccc
Q 045564 156 CKAPSKVQFAVLYSGIALACLGLGGLRFTLATMGANQFEIPQHQGIFFNWFFILTYASTVISSAAFVYIEDNLS 229 (296)
Q Consensus 156 ~~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~~~ad~f~~~~~r~~~f~~~y~~~~iG~~i~p~v~~~l~~~~g 229 (296)
+-+ .....+.--++..+..+...-......+++-|+ +.-++.|+++....|+|..++..++..+.+..+
T Consensus 314 -Gi~---d~~f~lgd~~l~~~~~~i~~mP~lvl~a~lcP~-G~Egt~yall~s~~Nlg~~~s~~lg~~l~~~~~ 382 (433)
T PF03092_consen 314 -GIP---DQWFALGDTILEEVIGMIAFMPSLVLAARLCPK-GSEGTVYALLASFSNLGSSVSSTLGAFLMELFG 382 (433)
T ss_pred -CcC---CeEEEEEhHHHHHHHHHHHHHHHHHHHHHHCCC-CchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 000 001112222344444444555566778899984 456899999888899999999888888765443
No 268
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=75.45 E-value=10 Score=29.57 Aligned_cols=31 Identities=16% Similarity=-0.037 Sum_probs=21.1
Q ss_pred HHHHHHHHHHHhhhhcchHHHHHHHHHHHHH
Q 045564 100 VNLFPVLGAIIADSFLGSFQVIWISSFISLL 130 (296)
Q Consensus 100 ~~~~~l~~G~laDr~iGR~~~i~i~~~l~~i 130 (296)
..+.....||+-|++.|.++-.++..++..+
T Consensus 55 GilVGa~iG~llD~~agTsPwglIv~lllGf 85 (116)
T COG5336 55 GILVGAGIGWLLDKFAGTSPWGLIVFLLLGF 85 (116)
T ss_pred HHHHHHHHHHHHHHhcCCCcHHHHHHHHHHH
Confidence 3344455699999999999876665554443
No 269
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=75.11 E-value=74 Score=31.57 Aligned_cols=121 Identities=15% Similarity=0.100 Sum_probs=66.2
Q ss_pred HHHHHHHHHHHHhhhhcchHHHHHHHHHHHHHHHHHHHhhccccCC---CCC-ccCCCCcCcCCCCc---------hhhH
Q 045564 99 FVNLFPVLGAIIADSFLGSFQVIWISSFISLLGTILLDSTATFDSL---RPQ-RCDIGLSLCKAPSK---------VQFA 165 (296)
Q Consensus 99 ~~~~~~l~~G~laDr~iGR~~~i~i~~~l~~ig~~~la~~~~~p~~---~~~-~c~~~~~~~~~~~~---------~~~~ 165 (296)
...+..++-.+++++ ++|.+++.+....+.....+.++.. +|.- .++ .|++. .....+.- +...
T Consensus 71 ~a~~f~~~y~kl~n~-~s~~~lFy~~~~~F~~fF~~f~~vl-yP~~~~lhp~~~~~~~-~~~~~~~~~~~i~~~~~Wt~s 147 (491)
T PF03219_consen 71 VAILFTILYSKLSNR-LSREKLFYIIIIPFLGFFALFAFVL-YPNRDILHPDAFADKL-LAILPPGFKGFIAMFRNWTFS 147 (491)
T ss_pred HHHHHHHHHHHHHhc-CCHHHHHHHHHHHHHHHHHHHHHHH-hhchhhcCCCHHHHHh-hhhccchHHHHHHHHHHHHHH
Confidence 455556778999999 7999988776666655555544432 3431 110 00000 00000000 0001
Q ss_pred HHHHHHHHHHHhhchhhh-hhhhhhhccCCCccchhhHHHHHHHHHHHHHHHHHHHHHhhhc
Q 045564 166 VLYSGIALACLGLGGLRF-TLATMGANQFEIPQHQGIFFNWFFILTYASTVISSAAFVYIED 226 (296)
Q Consensus 166 ~l~~~~~l~gig~g~~~~-~~~~~~ad~f~~~~~r~~~f~~~y~~~~iG~~i~p~v~~~l~~ 226 (296)
++++. .-+-.....+ .-..+..|.++.+ +-.+.|..+..+.|+|.+++..+..++.+
T Consensus 148 lfYv~---aElwgsvvlSlLFW~fAN~itt~~-eAKRfYpl~g~ganigli~sG~~~~~~~~ 205 (491)
T PF03219_consen 148 LFYVM---AELWGSVVLSLLFWGFANEITTVE-EAKRFYPLFGLGANIGLIFSGQLTSYFSS 205 (491)
T ss_pred HHHHH---HHHHHHHHHHHHHHHHHHhcCCHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 11111 1111111112 2366777877743 56789999999999999999988888776
No 270
>PRK10263 DNA translocase FtsK; Provisional
Probab=71.44 E-value=32 Score=38.02 Aligned_cols=35 Identities=20% Similarity=0.086 Sum_probs=20.9
Q ss_pred HHHHHHHHHHHhhhccccchhhHHHHHHHHHHHHH
Q 045564 212 ASTVISSAAFVYIEDNLSWRLGSGLNIAANLAGVV 246 (296)
Q Consensus 212 iG~~i~p~v~~~l~~~~gw~~~F~i~~~~~~~~~~ 246 (296)
.|+++|.++...+...+|.....++..++.+++++
T Consensus 142 gGGIIG~lLs~lL~~LfG~vGa~LILLlllLIGLi 176 (1355)
T PRK10263 142 SGGVIGSLLSTTLQPLLHSSGGTIALLCVWAAGLT 176 (1355)
T ss_pred ccchHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHH
Confidence 47777777777776666655455555554444443
No 271
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=71.21 E-value=87 Score=30.28 Aligned_cols=62 Identities=6% Similarity=-0.060 Sum_probs=47.4
Q ss_pred hhHHHHHHHHHHHHhhchhhhhhhhhhhccCCCccchhhHHHHHHHHHHHHHHHHHHHHHhhh
Q 045564 163 QFAVLYSGIALACLGLGGLRFTLATMGANQFEIPQHQGIFFNWFFILTYASTVISSAAFVYIE 225 (296)
Q Consensus 163 ~~~~l~~~~~l~gig~g~~~~~~~~~~ad~f~~~~~r~~~f~~~y~~~~iG~~i~p~v~~~l~ 225 (296)
+.+..++..+..|+..|....+....+.|..|+ ++|.-..+.-.++-.+|..++.+++-++.
T Consensus 334 si~ivf~lif~eGLlGGa~YVNtF~~I~~~~~~-~~REFslg~vsvsds~GI~lAgll~l~le 395 (402)
T PF02487_consen 334 SIWIVFVLIFYEGLLGGASYVNTFYRISEEVPP-EDREFSLGAVSVSDSLGILLAGLLGLPLE 395 (402)
T ss_pred HHHHHHHHHHHHHHhhhHHHHHHHHHHHhcCCH-HHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 345566667788888888899999999988874 46777787778888888888877766654
No 272
>KOG4830 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=70.72 E-value=6.2 Score=36.16 Aligned_cols=70 Identities=14% Similarity=0.200 Sum_probs=49.7
Q ss_pred cCCchhHHHHHHHHH-H-hHHHhHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHH---------hhhhcchH
Q 045564 50 RGGRTALLSRTVTCL-T-LGEGWVANLMVYMIQEFHITSINSALISNIVNGFVNLFPVLGAII---------ADSFLGSF 118 (296)
Q Consensus 50 ~~~~~~~~~l~~~~~-~-~~y~~~~~l~~yl~~~lg~s~~~a~~i~~~~~~~~~~~~l~~G~l---------aDr~iGR~ 118 (296)
-+.++.....++-.. - ......+++..|+++ .|+++.+.+.++.+..+.-++..++.|.. -|| +|||
T Consensus 14 igr~svf~yGvGHmlNDitAScWFTYlllfltq-iglsp~~~AmlML~GQVtda~st~ftGi~~d~nll~~~idr-~G~~ 91 (412)
T KOG4830|consen 14 IGRTSVFAYGVGHMLNDITASCWFTYLLLFLTQ-IGLSPSSRAMLMLIGQVTDAISTPFTGIFSDSNLLPACIDR-IGRR 91 (412)
T ss_pred ccceeeeeechhHHHhhHHHHHHHHHHHHHHHH-hcCCcchhHHHHHhhHHHHHHhcccccccccccccHHHhhh-hcce
Confidence 355555555555444 2 334466888889875 57778777788889999999999988754 578 7998
Q ss_pred HHH
Q 045564 119 QVI 121 (296)
Q Consensus 119 ~~i 121 (296)
+..
T Consensus 92 ~~w 94 (412)
T KOG4830|consen 92 MSW 94 (412)
T ss_pred eee
Confidence 854
No 273
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=70.61 E-value=1.2e+02 Score=30.19 Aligned_cols=63 Identities=14% Similarity=0.146 Sum_probs=46.2
Q ss_pred HHhhchhhhhhhhhhhccCCCccchhhHHHHHHHHHHHHHHHHHHHHHhhhccccchhhHHHH
Q 045564 175 CLGLGGLRFTLATMGANQFEIPQHQGIFFNWFFILTYASTVISSAAFVYIEDNLSWRLGSGLN 237 (296)
Q Consensus 175 gig~g~~~~~~~~~~ad~f~~~~~r~~~f~~~y~~~~iG~~i~p~v~~~l~~~~gw~~~F~i~ 237 (296)
++........--..+.+++|++..+...++-+....++-..+--++++.+.+..||+.+-.+.
T Consensus 293 gi~inLvE~~wK~~lk~~~~~~~~ysafmG~~~~~tGivtii~~~l~~~iir~~GW~~~Alit 355 (491)
T PF03219_consen 293 GISINLVEVVWKSQLKQLYPDPNDYSAFMGKFSSWTGIVTIIMMFLSSNIIRRFGWRTAALIT 355 (491)
T ss_pred HHHHHHHHHHHHHHHHHHCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHh
Confidence 344444555566677788987777788888877777776666667788999999999876664
No 274
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=69.78 E-value=56 Score=31.55 Aligned_cols=71 Identities=14% Similarity=0.086 Sum_probs=40.1
Q ss_pred hHHHHHHHHHHHHhhchhhhhhhhhhhccCCCccchhhHHHHHHHHHHHHHHHHHHHHHhhhccccc--hhhHHHHHHHH
Q 045564 164 FAVLYSGIALACLGLGGLRFTLATMGANQFEIPQHQGIFFNWFFILTYASTVISSAAFVYIEDNLSW--RLGSGLNIAAN 241 (296)
Q Consensus 164 ~~~l~~~~~l~gig~g~~~~~~~~~~ad~f~~~~~r~~~f~~~y~~~~iG~~i~p~v~~~l~~~~gw--~~~F~i~~~~~ 241 (296)
...=+++..+.+++.|......-++.+ .|++. ..+.+..+...++++|+..-..+.+ .|+ |..+.+.....
T Consensus 112 v~~~l~Gv~las~ssg~GE~tfL~lt~-~y~~~-----~l~~wssGTG~aGl~Ga~~y~~lT~-~g~s~~~tll~~~~lp 184 (402)
T PF02487_consen 112 VWVRLLGVVLASLSSGLGEVTFLSLTH-FYGKS-----SLSAWSSGTGGAGLVGALYYLGLTT-LGLSPRTTLLIMLVLP 184 (402)
T ss_pred hhHHHHHHHHHhhhhhhhHHHHHHHHH-hcCcc-----ccccccCCcChhhHHHHHHHHHHHH-hCcCHHHHHHHHHHHH
Confidence 345567777888888887777777544 46522 1233344555566666654444443 343 55666555443
No 275
>PF09527 ATPase_gene1: Putative F0F1-ATPase subunit (ATPase_gene1)
Probab=69.49 E-value=31 Score=23.05 Aligned_cols=35 Identities=9% Similarity=-0.002 Sum_probs=23.4
Q ss_pred HHHHHHHHHHHHHHHHhhhhcchHHHHHHHHHHHH
Q 045564 95 IVNGFVNLFPVLGAIIADSFLGSFQVIWISSFISL 129 (296)
Q Consensus 95 ~~~~~~~~~~l~~G~laDr~iGR~~~i~i~~~l~~ 129 (296)
....+..+.....|+..|+++|.++...+..++..
T Consensus 8 ~~~~~~i~~g~~~G~~lD~~~~t~p~~~~~g~llG 42 (55)
T PF09527_consen 8 FTMAAPILVGFFLGYWLDKWFGTSPWFTLIGLLLG 42 (55)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHH
Confidence 33445566667789999998999776655544443
No 276
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=64.82 E-value=39 Score=33.61 Aligned_cols=93 Identities=9% Similarity=-0.013 Sum_probs=55.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhcchHHHHHHHHHHHHHHHHHHHhhccccCCCCCccCCCCcCcCCCCchhhHHHHH
Q 045564 90 ALISNIVNGFVNLFPVLGAIIADSFLGSFQVIWISSFISLLGTILLDSTATFDSLRPQRCDIGLSLCKAPSKVQFAVLYS 169 (296)
Q Consensus 90 ~~i~~~~~~~~~~~~l~~G~laDr~iGR~~~i~i~~~l~~ig~~~la~~~~~p~~~~~~c~~~~~~~~~~~~~~~~~l~~ 169 (296)
|.+-.+..+.+.+..++.|++-.+ +.|.--+.++.+-...|-++ .+... +.+++..++
T Consensus 301 G~veA~~tllga~~a~~ag~~~~~-w~~~~~l~l~v~s~~~~gll-~~m~~--------------------t~~Iw~~Y~ 358 (511)
T TIGR00806 301 GAVDAASTLLGAITSFIAGFVNIR-WARWSKLLIAVVSAIQAGLV-FWMSQ--------------------SHDIWVLYV 358 (511)
T ss_pred CHHHHHHHHHHHHHHHHHHhhcCC-chhhHHHHHHHHHHHHHHHh-hhhhc--------------------ccchHHHHH
Confidence 456677788888899999999777 45543444433322222221 11110 135677888
Q ss_pred HHHHHHHhhchhhhhhhhhhhccCCCccchhhHHHH
Q 045564 170 GIALACLGLGGLRFTLATMGANQFEIPQHQGIFFNW 205 (296)
Q Consensus 170 ~~~l~gig~g~~~~~~~~~~ad~f~~~~~r~~~f~~ 205 (296)
+-++.........+....-++.-..++ .-+-.|++
T Consensus 359 ~yvlf~~~y~flitia~~~iA~~L~~~-~~aLvFGi 393 (511)
T TIGR00806 359 TYVLFRGIYQFLVPIATFQIASSLSKE-LCALVFGI 393 (511)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccc-ceEEEEec
Confidence 877777777777676666666655533 34566665
No 277
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=61.57 E-value=1.3e+02 Score=29.24 Aligned_cols=55 Identities=11% Similarity=0.048 Sum_probs=37.4
Q ss_pred HHHHHHHHHHHHhhchhhhhhhhhhhccCCCccchhhHHHHHHHHHHHHHHHHHHH
Q 045564 165 AVLYSGIALACLGLGGLRFTLATMGANQFEIPQHQGIFFNWFFILTYASTVISSAA 220 (296)
Q Consensus 165 ~~l~~~~~l~gig~g~~~~~~~~~~ad~f~~~~~r~~~f~~~y~~~~iG~~i~p~v 220 (296)
+..++..++.|+..|-..+....+..+..++ ++|..+-++..++.++|-.+|..+
T Consensus 373 ~~~~~~~~l~gltnGy~~s~~m~~~p~~v~~-~e~e~aG~~~~~~l~~Gl~~Gs~l 427 (437)
T TIGR00939 373 AYFIILMLLFGFSNGYLGSLSMCLAPRQVDP-HEREVAGALMVIFLLVGLALGAVL 427 (437)
T ss_pred HHHHHHHHHHHHhhhHHHHHHHHhcCCCCCH-HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4555667888988887777777777777764 355666666666667776666543
No 278
>PF06645 SPC12: Microsomal signal peptidase 12 kDa subunit (SPC12); InterPro: IPR009542 This family consists of several microsomal signal peptidase 12 kDa subunit proteins. Translocation of polypeptide chains across the endoplasmic reticulum (ER) membrane is triggered by signal sequences. Subsequently, signal recognition particle interacts with its membrane receptor and the ribosome-bound nascent chain is targeted to the ER where it is transferred into a protein-conducting channel. At some point, a second signal sequence recognition event takes place in the membrane and translocation of the nascent chain through the membrane occurs. The signal sequence of most secretory and membrane proteins is cleaved off at this stage. Cleavage occurs by the signal peptidase complex (SPC) as soon as the lumenal domain of the translocating polypeptide is large enough to expose its cleavage site to the enzyme. The signal peptidase complex is possibly also involved in proteolytic events in the ER membrane other than the processing of the signal sequence, for example the further digestion of the cleaved signal peptide or the degradation of membrane proteins. Mammalian signal peptidase is as a complex of five different polypeptide chains. This family represents the 12 kDa subunit (SPC12).; GO: 0008233 peptidase activity, 0006465 signal peptide processing, 0005787 signal peptidase complex, 0016021 integral to membrane
Probab=60.64 E-value=21 Score=25.93 Aligned_cols=47 Identities=17% Similarity=0.188 Sum_probs=29.2
Q ss_pred HHHHHHHHHHHHHHHHHhhhccccchhhHHHHHHHHHHHHHHHHhCCCch
Q 045564 206 FFILTYASTVISSAAFVYIEDNLSWRLGSGLNIAANLAGVVIFLSGKHFY 255 (296)
Q Consensus 206 ~y~~~~iG~~i~p~v~~~l~~~~gw~~~F~i~~~~~~~~~~~~~~~~~~~ 255 (296)
+.....++++++ ++.||+.+++ +..+++.++..++++++.++--|-|
T Consensus 13 ~~~il~~~~iis-fi~Gy~~q~~--~~~~~~~~~g~~~~~lv~vP~Wp~y 59 (76)
T PF06645_consen 13 MQYILIISAIIS-FIVGYITQSF--SYTFYIYGAGVVLTLLVVVPPWPFY 59 (76)
T ss_pred HHHHHHHHHHHH-HHHHHHHHHH--HHHHHHHHHHHHHHHhheeCCcHhh
Confidence 344555666665 5678887744 6677777776666666555544433
No 279
>KOG2601 consensus Iron transporter [Inorganic ion transport and metabolism]
Probab=54.21 E-value=2.2e+02 Score=27.78 Aligned_cols=60 Identities=15% Similarity=0.095 Sum_probs=34.3
Q ss_pred HHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhcchHHHHHHHHHHHHHHHHHH
Q 045564 75 MVYMIQEFHITSINSALISNIVNGFVNLFPVLGAIIADSFLGSFQVIWISSFISLLGTILL 135 (296)
Q Consensus 75 ~~yl~~~lg~s~~~a~~i~~~~~~~~~~~~l~~G~laDr~iGR~~~i~i~~~l~~ig~~~l 135 (296)
..|+..-.|-|..-.+..-.+-.+...+..++-|-.-|+ ..|+|++....++--+..++.
T Consensus 51 sL~M~~L~gnsl~lvAvyglvesgs~lvlg~ivGq~vDg-~sr~Kvi~~~L~lqNlSv~va 110 (503)
T KOG2601|consen 51 SLFMILLGGNSLLLVAVYGLVESGSQLVLGPIVGQWVDG-MSRVKVIQTWLLLQNLSVIVA 110 (503)
T ss_pred HHHHHHHcCceehhHHHHHHHHHhHHHhhHHHHHHHhcc-hhHHHHHHHHHhhccHHHHHH
Confidence 345554444333333333333344455555666777899 799999988776655444433
No 280
>KOG4112 consensus Signal peptidase subunit [Intracellular trafficking, secretion, and vesicular transport]
Probab=54.00 E-value=45 Score=25.28 Aligned_cols=50 Identities=12% Similarity=0.116 Sum_probs=27.7
Q ss_pred HHHHHHHHHHHHHHHHHHhhhccccchhhHHHHHHHHHHHHHHHHhCCCchhH
Q 045564 205 WFFILTYASTVISSAAFVYIEDNLSWRLGSGLNIAANLAGVVIFLSGKHFYFP 257 (296)
Q Consensus 205 ~~y~~~~iG~~i~p~v~~~l~~~~gw~~~F~i~~~~~~~~~~~~~~~~~~~~~ 257 (296)
++.+...+|+++|- +.|+.++.++|. ..+..+..++.+++.++--|.|+|
T Consensus 27 ~~q~ilti~aiVg~-i~Gf~~Qqls~t--vy~vg~~~v~t~li~LPpwP~y~r 76 (101)
T KOG4112|consen 27 FQQLILTIGAIVGF-IYGFAQQQLSVT--VYIVGAGFVFTLLITLPPWPWYRR 76 (101)
T ss_pred HHHHHHHHHHHHHH-HHHHHHHHHHHH--HHHHHHHHHHHHHhcCCCchhhhc
Confidence 34566677887775 566666666653 333333344445445555555554
No 281
>TIGR02230 ATPase_gene1 F0F1-ATPase subunit, putative. This model represents a protein found encoded in F1F0-ATPase operons in several genomes, including Methanosarcina barkeri (archaeal) and Chlorobium tepidum (bacterial). It is a small protein (about 100 amino acids) with long hydrophic stretches and is presumed to be a subunit of the enzyme.
Probab=52.86 E-value=57 Score=25.08 Aligned_cols=28 Identities=18% Similarity=-0.005 Sum_probs=18.0
Q ss_pred HHHHHHHHHHHHHHhhhhcchHHHHHHH
Q 045564 97 NGFVNLFPVLGAIIADSFLGSFQVIWIS 124 (296)
Q Consensus 97 ~~~~~~~~l~~G~laDr~iGR~~~i~i~ 124 (296)
.++..+..++.|..-|+.+|-.+.+.+.
T Consensus 52 ~v~pil~G~~lG~WLD~~~~t~~~~tl~ 79 (100)
T TIGR02230 52 VAIPTLLGVAVGIWLDRHYPSPFSWTLT 79 (100)
T ss_pred HHHHHHHHHHHHHHHHhhcCCCcHHHHH
Confidence 3445555667788888888876644333
No 282
>COG3202 ATP/ADP translocase [Energy production and conversion]
Probab=49.81 E-value=1.1e+02 Score=30.38 Aligned_cols=74 Identities=14% Similarity=0.097 Sum_probs=48.6
Q ss_pred HhhchhhhhhhhhhhccCCCccchhhHHHHHHHHHHHH-HHHHHHHHHhhhccccchhhHHHHHHHHHHHHHHHH
Q 045564 176 LGLGGLRFTLATMGANQFEIPQHQGIFFNWFFILTYAS-TVISSAAFVYIEDNLSWRLGSGLNIAANLAGVVIFL 249 (296)
Q Consensus 176 ig~g~~~~~~~~~~ad~f~~~~~r~~~f~~~y~~~~iG-~~i~p~v~~~l~~~~gw~~~F~i~~~~~~~~~~~~~ 249 (296)
+..-...+.--+-+.+++|.+..+...++-+..-.++- ..+.-.+++-+.+..||-++=.++-++++++.++++
T Consensus 296 v~inLvE~~wKs~ik~~~~~~~~~~~f~~~~~~~tgvv~~v~~~~~~s~~ir~~GW~~~AlitPiv~litg~lFF 370 (509)
T COG3202 296 VSINLVEGVWKSGIKELYPTTNEYTAFMGRFQIWTGVVSLVVFLFPGSNLIRRVGWFTGALITPLVMLITGVLFF 370 (509)
T ss_pred HHHHHHHHHHHHhHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHhhHHHHHHHHHHHHHHHHHHHH
Confidence 34444555555667788886666777777765555554 444556677888888999888777776666655443
No 283
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=40.83 E-value=1.5e+02 Score=21.96 Aligned_cols=40 Identities=25% Similarity=0.210 Sum_probs=29.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhcchHHHHHHHHHHHHH
Q 045564 90 ALISNIVNGFVNLFPVLGAIIADSFLGSFQVIWISSFISLL 130 (296)
Q Consensus 90 ~~i~~~~~~~~~~~~l~~G~laDr~iGR~~~i~i~~~l~~i 130 (296)
+........+..+++.++|++.|. .|.+..+.+...+..+
T Consensus 90 ~~~~~~~~~g~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 129 (141)
T TIGR00880 90 GLMSAGIALGPLLGPPLGGVLAQF-LGWRAPFLFLAILALA 129 (141)
T ss_pred HHHHHhHHHHHHHhHHhHHHHhcc-cchHHHHHHHHHHHHH
Confidence 445566777888889999999998 6877776665554444
No 284
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=39.13 E-value=1.1e+02 Score=30.88 Aligned_cols=64 Identities=8% Similarity=-0.088 Sum_probs=50.3
Q ss_pred hhHHHHHHHHHHHHhhchhhhhhhhhhhccCCCccchhhHHHHHHHHHHHHHHHHHHHHHhhhcc
Q 045564 163 QFAVLYSGIALACLGLGGLRFTLATMGANQFEIPQHQGIFFNWFFILTYASTVISSAAFVYIEDN 227 (296)
Q Consensus 163 ~~~~l~~~~~l~gig~g~~~~~~~~~~ad~f~~~~~r~~~f~~~y~~~~iG~~i~p~v~~~l~~~ 227 (296)
+...++--.+++|++.........-+.-+++|+ ..|..+.+++...+.+|..++..+...+...
T Consensus 457 Si~W~iPQyvLig~~Evf~~vg~lEFfY~qaP~-sMkS~~~al~l~t~a~G~~lss~Lv~~v~~~ 520 (571)
T KOG1237|consen 457 SILWQIPQYVLLGAGEVFTSVGGLEFFYSQAPE-SMKSVATALWLLTVAVGNYLSSVLVSLVQFS 520 (571)
T ss_pred eHHHHHHHHHHHHHHHHHHhhhhHHHhHhhCCH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 444455556788999888888888888899994 4788899999999999999988887655443
No 285
>PF12805 FUSC-like: FUSC-like inner membrane protein yccS
Probab=38.94 E-value=2.9e+02 Score=24.87 Aligned_cols=15 Identities=27% Similarity=0.204 Sum_probs=7.0
Q ss_pred HHHHHHHHHHHhhch
Q 045564 166 VLYSGIALACLGLGG 180 (296)
Q Consensus 166 ~l~~~~~l~gig~g~ 180 (296)
.+.+..++.+++.++
T Consensus 25 l~~~~~~~~~F~~~m 39 (284)
T PF12805_consen 25 LLILVLALLTFFFGM 39 (284)
T ss_pred HHHHHHHHHHHHHHH
Confidence 444444455555443
No 286
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=37.67 E-value=3.9e+02 Score=25.91 Aligned_cols=80 Identities=14% Similarity=-0.029 Sum_probs=41.6
Q ss_pred hHHHHHHHHHHHHhhchhhhhhhhhhhccCCCccchhhHHHHHHHHHHHHHHHHH---HHHHhhhcc--ccchhhHHHHH
Q 045564 164 FAVLYSGIALACLGLGGLRFTLATMGANQFEIPQHQGIFFNWFFILTYASTVISS---AAFVYIEDN--LSWRLGSGLNI 238 (296)
Q Consensus 164 ~~~l~~~~~l~gig~g~~~~~~~~~~ad~f~~~~~r~~~f~~~y~~~~iG~~i~p---~v~~~l~~~--~gw~~~F~i~~ 238 (296)
....++...+.+++.|..+.......++ +|.+ .-...+ .+.++++.+.. ++.....++ .+-..=|.++.
T Consensus 117 f~vt~~~vv~~~~a~a~~qgs~~G~a~~-~P~~-ytqavm----~G~a~aG~l~Sl~~i~tka~~~~~~~sA~~yF~~s~ 190 (406)
T KOG1479|consen 117 FLVTLIIVVLLNLANAVVQGSLYGLAGL-FPSE-YTQAVM----SGQALAGTLTSLLRILTKAAFSDSRTSALIYFITST 190 (406)
T ss_pred HHHHHHHHHHHhhhhhhhccchhhhhhc-CCHH-HHHHHH----hcchhHhHHHHHHHHHHHHhcCCCCceeehhHHHHH
Confidence 3444555667778888888888886665 6623 222222 33444444433 222223222 22223356666
Q ss_pred HHHHHHHHHHH
Q 045564 239 AANLAGVVIFL 249 (296)
Q Consensus 239 ~~~~~~~~~~~ 249 (296)
++.++.++.+.
T Consensus 191 ~~~llC~i~y~ 201 (406)
T KOG1479|consen 191 VILLLCFVLYL 201 (406)
T ss_pred HHHHHHHHHHH
Confidence 66666666655
No 287
>PF11947 DUF3464: Protein of unknown function (DUF3464); InterPro: IPR021855 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 137 to 196 amino acids in length.
Probab=37.03 E-value=1.3e+02 Score=24.99 Aligned_cols=48 Identities=17% Similarity=0.160 Sum_probs=28.7
Q ss_pred HHHHHHHHHHHHhhchhhhhhhhhhhccCCCccchhhHHHHHHHHHHHHHHH
Q 045564 165 AVLYSGIALACLGLGGLRFTLATMGANQFEIPQHQGIFFNWFFILTYASTVI 216 (296)
Q Consensus 165 ~~l~~~~~l~gig~g~~~~~~~~~~ad~f~~~~~r~~~f~~~y~~~~iG~~i 216 (296)
..+++...+.|+|.- ...+.+++--++++ +-|+.++|=.+-.|++-+.
T Consensus 98 ~~~~~S~~~Fg~gll---GisYGilSaSWD~~-r~GSllG~~e~~~N~~r~~ 145 (153)
T PF11947_consen 98 AVLLVSLVFFGLGLL---GISYGILSASWDPE-REGSLLGWEEFKRNWGRMW 145 (153)
T ss_pred HHHHHHHHHHHHHHH---hhhhhhcccccCCC-CCCCcccHHHHHHhHHHHH
Confidence 344444444444432 23455566666643 5799999988888887544
No 288
>TIGR01667 YCCS_YHJK integral membrane protein, YccS/YhfK family. TMHMM on members of this model shows a consensus of 11 transmembrane helices separated into two clusters, an N-terminal cluster of 6 and a central cluster of 5. This would indicate two non-membrane domains one on each side of the membrane
Probab=36.96 E-value=3.8e+02 Score=27.93 Aligned_cols=33 Identities=15% Similarity=0.217 Sum_probs=23.0
Q ss_pred HHHHHh---hhhcchHHHHHHHHHHHHHHHHHHHhh
Q 045564 106 LGAIIA---DSFLGSFQVIWISSFISLLGTILLDST 138 (296)
Q Consensus 106 ~~G~la---Dr~iGR~~~i~i~~~l~~ig~~~la~~ 138 (296)
+++-++ |++-||.|-+.++.++++++.+...+.
T Consensus 42 ia~~l~D~~~~~~~R~~~l~it~~~f~i~sl~v~ll 77 (701)
T TIGR01667 42 IAAGLDDLDDRLTGRLKNLIITLSCFSIASFLVQLL 77 (701)
T ss_pred HhhccCCCCccHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344454 455678888999998888877766544
No 289
>COG3086 RseC Positive regulator of sigma E activity [Signal transduction mechanisms]
Probab=36.78 E-value=1.5e+02 Score=24.43 Aligned_cols=41 Identities=27% Similarity=0.121 Sum_probs=20.1
Q ss_pred hCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhcchHHHHHH
Q 045564 82 FHITSINSALISNIVNGFVNLFPVLGAIIADSFLGSFQVIWI 123 (296)
Q Consensus 82 lg~s~~~a~~i~~~~~~~~~~~~l~~G~laDr~iGR~~~i~i 123 (296)
+|++....-....+..+.-.++.+++++++|+ +|+-..+.+
T Consensus 67 iGi~EkslL~sA~LvYi~PL~~l~v~~~La~~-L~~~e~~~~ 107 (150)
T COG3086 67 LGIEEKSLLKSALLVYIFPLVGLFLGAILAQY-LFFSELIVI 107 (150)
T ss_pred EccCcccHHHHHHHHHHHHHHHHHHHHHHHHH-HhhhhHHHH
Confidence 34433333333333334444555566777777 566554443
No 290
>PF06570 DUF1129: Protein of unknown function (DUF1129); InterPro: IPR009214 There are currently no experimental data for members of this group or their homologues. However, these proteins contain predicted integral membrane proteins (with several transmembrane segments).
Probab=36.28 E-value=2e+02 Score=24.70 Aligned_cols=32 Identities=13% Similarity=0.038 Sum_probs=18.3
Q ss_pred hhccccchhhHHHHHHHHHHHHHHHHhCCCch
Q 045564 224 IEDNLSWRLGSGLNIAANLAGVVIFLSGKHFY 255 (296)
Q Consensus 224 l~~~~gw~~~F~i~~~~~~~~~~~~~~~~~~~ 255 (296)
+....+-+.+-++..++.++++.+.+..+++|
T Consensus 170 lp~~inp~l~~~~~iiig~i~~~~~~~lkkk~ 201 (206)
T PF06570_consen 170 LPPVINPVLPPWVYIIIGVIAFALRFYLKKKY 201 (206)
T ss_pred ccccCCcCCCHHHHHHHHHHHHHHHHHHHHHh
Confidence 33334555666666666666666555555555
No 291
>TIGR01666 YCCS hypothetical membrane protein, TIGR01666. This model represents a clade of sequences from gamma and beta proteobacteria. These proteins are 700 amino acids long and many have been annotated as putative membrane proteins. The gene from Salmonella has been annotated as a putative efflux transporter. The gene from E. coli has the name yccS.
Probab=34.59 E-value=5.1e+02 Score=27.08 Aligned_cols=33 Identities=9% Similarity=0.226 Sum_probs=22.3
Q ss_pred HHHHHhh---hhcchHHHHHHHHHHHHHHHHHHHhh
Q 045564 106 LGAIIAD---SFLGSFQVIWISSFISLLGTILLDST 138 (296)
Q Consensus 106 ~~G~laD---r~iGR~~~i~i~~~l~~ig~~~la~~ 138 (296)
+.+-++| ++-||.|-+.+..+++.++.+...+.
T Consensus 42 ia~al~D~d~~~~~R~~~l~~t~~~f~i~sl~v~ll 77 (704)
T TIGR01666 42 IAAALVDLDDRLTGRLKNVIFTLICFSIASFSVELL 77 (704)
T ss_pred HhhccCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3455554 45678888888888888777665543
No 292
>COG3202 ATP/ADP translocase [Energy production and conversion]
Probab=34.33 E-value=4.9e+02 Score=26.04 Aligned_cols=139 Identities=14% Similarity=0.114 Sum_probs=77.7
Q ss_pred HHHHhCCC---hhHHHHHHHHHHH-HHHHHHHHHHHHhhhhcchHHHHHHHHHHHHHHHHHHHhhccccCCCCCccCCCC
Q 045564 78 MIQEFHIT---SINSALISNIVNG-FVNLFPVLGAIIADSFLGSFQVIWISSFISLLGTILLDSTATFDSLRPQRCDIGL 153 (296)
Q Consensus 78 l~~~lg~s---~~~a~~i~~~~~~-~~~~~~l~~G~laDr~iGR~~~i~i~~~l~~ig~~~la~~~~~p~~~~~~c~~~~ 153 (296)
+.+.+.++ +.....+-+.... .+.+..++-+++.++ +-|.+++.+-...+....++.++-. +|. |+..|
T Consensus 49 lKDslvv~~~gae~I~FlK~~~vlP~avif~~iy~kl~~~-lt~~~vF~~~~~~F~~fF~LFa~Vi-~P~-----~~~~h 121 (509)
T COG3202 49 LKDSLVVTRQGAESISFLKTWGVLPSAVIFTIIYQKLLNI-LTREKVFYIILGFFLGFFALFAFVI-YPY-----KDILH 121 (509)
T ss_pred hhhheEeecCcchhhHHHHHHHhchHHHHHHHHHHHHHhh-cCHHHHHHHHHHHHHHHHHHHHHHH-hcc-----ccccC
Confidence 34455544 3333444444555 567778888999999 7999988877766665555555433 332 11111
Q ss_pred c-------C-cCCC-C---------chhhHHHHHHHHHHHHhhchhhhhhhhhhhccCCCccchhhHHHHHHHHHHHHHH
Q 045564 154 S-------L-CKAP-S---------KVQFAVLYSGIALACLGLGGLRFTLATMGANQFEIPQHQGIFFNWFFILTYASTV 215 (296)
Q Consensus 154 ~-------~-~~~~-~---------~~~~~~l~~~~~l~gig~g~~~~~~~~~~ad~f~~~~~r~~~f~~~y~~~~iG~~ 215 (296)
. . ...| . .++...+++.-=+ .|.=...-.-..+..|+...+ +-.++++.++...|++..
T Consensus 122 p~~~~~~~~~~~~p~~l~~~ili~~~Ws~s~~Yi~aEL--WgslV~S~lFw~faNeitt~~-eakRFy~lf~l~~ni~ll 198 (509)
T COG3202 122 PDPEFSRDLFADLPMFLKWFILIVGEWSYSLFYIMAEL--WGSLVLSLLFWQFANEITTIE-EAKRFYPLFGLGANISLL 198 (509)
T ss_pred CCHHHHHHHHhhCCccceeeeEeecchHHHHHHHHHHH--HHHHHHHHHHHHHHHHhhhHH-HhhhhHHHHHHHHHHHHH
Confidence 0 0 0011 0 0122222221100 011111112345566776633 567899999999999999
Q ss_pred HHHHHHHhhhc
Q 045564 216 ISSAAFVYIED 226 (296)
Q Consensus 216 i~p~v~~~l~~ 226 (296)
++..+..++.+
T Consensus 199 lsg~~~~~~~k 209 (509)
T COG3202 199 LSGEVTSWLSK 209 (509)
T ss_pred HHHHHHHHHhh
Confidence 99999888865
No 293
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=33.79 E-value=4.5e+02 Score=25.51 Aligned_cols=31 Identities=16% Similarity=0.244 Sum_probs=22.6
Q ss_pred hhHHHHHHHHHHHHhhchhhhhhhhhhhccCC
Q 045564 163 QFAVLYSGIALACLGLGGLRFTLATMGANQFE 194 (296)
Q Consensus 163 ~~~~l~~~~~l~gig~g~~~~~~~~~~ad~f~ 194 (296)
.....++..++.|++.+.......++.+ .||
T Consensus 105 ~f~~~~~~v~~~g~~~~~~q~s~~gla~-~fp 135 (437)
T TIGR00939 105 FFVTTMASVVIINSGMALLQGSLFGLAG-VFP 135 (437)
T ss_pred HHHHHHHHHHHHHhhhhhhcccchhhcc-cCC
Confidence 3455556667788888888888888666 577
No 294
>PF13782 SpoVAB: Stage V sporulation protein AB
Probab=32.31 E-value=2.1e+02 Score=22.46 Aligned_cols=46 Identities=17% Similarity=-0.027 Sum_probs=23.0
Q ss_pred HHHHhhchhhhhhhhhhhccC---C---CccchhhHHHHHHHHHHHHHHHHH
Q 045564 173 LACLGLGGLRFTLATMGANQF---E---IPQHQGIFFNWFFILTYASTVISS 218 (296)
Q Consensus 173 l~gig~g~~~~~~~~~~ad~f---~---~~~~r~~~f~~~y~~~~iG~~i~p 218 (296)
+.|+..|....+..+..+|.. | .|-+......+.-+++.+|=.+|.
T Consensus 53 i~GL~~GiFvG~la~ALaEvlnv~PIlarRi~l~~~i~~li~aialGK~~Gs 104 (110)
T PF13782_consen 53 IFGLFAGIFVGCLAAALAEVLNVFPILARRIGLRRGIPYLIMAIALGKVIGS 104 (110)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhchHHHHHHHHHHHHHHH
Confidence 445555555555555555544 4 333334455555555556655544
No 295
>TIGR02230 ATPase_gene1 F0F1-ATPase subunit, putative. This model represents a protein found encoded in F1F0-ATPase operons in several genomes, including Methanosarcina barkeri (archaeal) and Chlorobium tepidum (bacterial). It is a small protein (about 100 amino acids) with long hydrophic stretches and is presumed to be a subunit of the enzyme.
Probab=31.11 E-value=2.4e+02 Score=21.61 Aligned_cols=22 Identities=9% Similarity=0.173 Sum_probs=12.2
Q ss_pred HHHHHHHHHHHHHHHhhhcccc
Q 045564 208 ILTYASTVISSAAFVYIEDNLS 229 (296)
Q Consensus 208 ~~~~iG~~i~p~v~~~l~~~~g 229 (296)
+.+.+..++|..++-||-+.++
T Consensus 50 ~~~v~pil~G~~lG~WLD~~~~ 71 (100)
T TIGR02230 50 WSVAIPTLLGVAVGIWLDRHYP 71 (100)
T ss_pred HHHHHHHHHHHHHHHHHHhhcC
Confidence 3333445555566667766665
No 296
>PRK12460 2-keto-3-deoxygluconate permease; Provisional
Probab=31.01 E-value=3.2e+02 Score=25.46 Aligned_cols=22 Identities=0% Similarity=0.066 Sum_probs=15.2
Q ss_pred HHHHHHHHHHHHHHHHhhhccc
Q 045564 207 FILTYASTVISSAAFVYIEDNL 228 (296)
Q Consensus 207 y~~~~iG~~i~p~v~~~l~~~~ 228 (296)
..++-+-+++.|++..|..++.
T Consensus 286 aa~vivTail~P~~t~~~~k~~ 307 (312)
T PRK12460 286 AASVIVTAILTPLLTSWVAKKE 307 (312)
T ss_pred HHHHHHHHHHHHHHHHHHHHHh
Confidence 3455567788888888876543
No 297
>TIGR00383 corA magnesium Mg(2+) and cobalt Co(2+) transport protein (corA). The article in Microb Comp Genomics 1998;3(3):151-69 (Medline:98448512) discusses this family and suggests that some members may have functions other than Mg2+ transport.
Probab=30.91 E-value=1.1e+02 Score=28.02 Aligned_cols=27 Identities=11% Similarity=0.049 Sum_probs=16.9
Q ss_pred HHHHhhhccc------cchhhHHHHHHHHHHHH
Q 045564 219 AAFVYIEDNL------SWRLGSGLNIAANLAGV 245 (296)
Q Consensus 219 ~v~~~l~~~~------gw~~~F~i~~~~~~~~~ 245 (296)
+++|+...|+ .|.++|++..+++++..
T Consensus 273 ~IaGiyGMNf~~mP~l~~~~gy~~~l~~m~~i~ 305 (318)
T TIGR00383 273 FIAGIYGMNFKFMPELNWKYGYPAVLIVMAVIA 305 (318)
T ss_pred HHHHHHhCCcccCccccchhHHHHHHHHHHHHH
Confidence 4566655553 48889988776554433
No 298
>PF09930 DUF2162: Predicted transporter (DUF2162); InterPro: IPR017199 This group represents a predicted membrane transporter, MTH672 type.
Probab=30.61 E-value=3.8e+02 Score=23.68 Aligned_cols=64 Identities=16% Similarity=0.216 Sum_probs=39.5
Q ss_pred HHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhcchHHHHHHHHHHHHHHHHHHHhhccccCC
Q 045564 77 YMIQEFHITSINSALISNIVNGFVNLFPVLGAIIADSFLGSFQVIWISSFISLLGTILLDSTATFDSL 144 (296)
Q Consensus 77 yl~~~lg~s~~~a~~i~~~~~~~~~~~~l~~G~laDr~iGR~~~i~i~~~l~~ig~~~la~~~~~p~~ 144 (296)
.+.+.++.+..+.+..+........ ++.-.+.+| .+.++...+|.+...+|...+..+...|.+
T Consensus 121 l~a~~~~~s~~~ig~~~g~if~i~i---l~ss~i~r~-~~~~~p~~LG~~Mi~~GlyfLl~aliiPn~ 184 (224)
T PF09930_consen 121 LLAPSIGLSGWEIGLVLGLIFFILI---LLSSFIFRR-LKKPYPIILGNFMIFLGLYFLLSALIIPNY 184 (224)
T ss_pred HHHHhcCchHHHHHHHHHHHHHHHH---HHHHHHHHH-hcCCCchHHHHHHHHHHHHHHHHHHHHhhH
Confidence 4556788888888776654433333 556777778 675556677777666666554333334543
No 299
>COG0598 CorA Mg2+ and Co2+ transporters [Inorganic ion transport and metabolism]
Probab=29.99 E-value=90 Score=28.93 Aligned_cols=24 Identities=21% Similarity=0.469 Sum_probs=14.4
Q ss_pred ccchhhHHHHHHHHHH-HHHHHHhC
Q 045564 228 LSWRLGSGLNIAANLA-GVVIFLSG 251 (296)
Q Consensus 228 ~gw~~~F~i~~~~~~~-~~~~~~~~ 251 (296)
..|+++|++..+++++ +++.++++
T Consensus 292 l~~~~Gy~~~l~~m~~~~~~~~~~f 316 (322)
T COG0598 292 LDWPYGYPIALILMLLLALLLYLYF 316 (322)
T ss_pred CCCcccHHHHHHHHHHHHHHHHHHH
Confidence 3588898887775544 33334433
No 300
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=28.86 E-value=4.3e+02 Score=26.61 Aligned_cols=55 Identities=9% Similarity=0.137 Sum_probs=38.4
Q ss_pred HHHHHHhhchhhhhhhhhhhccCCCccchhhHHHHHHHHHHHHHHHHHHHHHhhhc
Q 045564 171 IALACLGLGGLRFTLATMGANQFEIPQHQGIFFNWFFILTYASTVISSAAFVYIED 226 (296)
Q Consensus 171 ~~l~gig~g~~~~~~~~~~ad~f~~~~~r~~~f~~~y~~~~iG~~i~p~v~~~l~~ 226 (296)
-++..+..-.....+.++-+...+ +..-|+.+.+.+...|+|+---..++=++.|
T Consensus 412 ~~l~sf~stvmFVai~AFharISD-P~IGGTYMTLLNTvSNLGGtWP~~~vL~lVD 466 (544)
T PF13000_consen 412 HVLSSFMSTVMFVAIMAFHARISD-PAIGGTYMTLLNTVSNLGGTWPRTFVLWLVD 466 (544)
T ss_pred HHHHHHHHHHHHHHHHHHHhhccC-cccchHHHHHHHHHHhcCCCchHHHHHHHhh
Confidence 344445555667778888888776 4578999999999999997655545444443
No 301
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=28.50 E-value=2.5e+02 Score=20.81 Aligned_cols=65 Identities=11% Similarity=-0.030 Sum_probs=35.7
Q ss_pred HHhhchhhhhhhhhhhccCCCccchhhHHHHHHHHHHHHHHHHHHHHHhhhccccchhhHHHHHHHHHH
Q 045564 175 CLGLGGLRFTLATMGANQFEIPQHQGIFFNWFFILTYASTVISSAAFVYIEDNLSWRLGSGLNIAANLA 243 (296)
Q Consensus 175 gig~g~~~~~~~~~~ad~f~~~~~r~~~f~~~y~~~~iG~~i~p~v~~~l~~~~gw~~~F~i~~~~~~~ 243 (296)
|+|--.+.|..|.+..|.--+. ..-++...++.+|-++|.+...++.+....+..+.+..+...+
T Consensus 5 GigRFayTplLP~M~~~~~ls~----~~ag~lasaNy~GYL~GAl~~~~~~~~~~~~~~~~~~l~~~~~ 69 (85)
T PF06779_consen 5 GIGRFAYTPLLPLMQADGGLSL----SQAGWLASANYLGYLVGALLASRLPRHSRPRRLLRAGLLLTVL 69 (85)
T ss_pred hhHHHHHHhHhHHHHHhcCCCH----HHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHH
Confidence 4444456677777777754322 2223334455667777777777776654444445544444333
No 302
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=27.47 E-value=3.1e+02 Score=27.24 Aligned_cols=87 Identities=11% Similarity=-0.002 Sum_probs=49.4
Q ss_pred ccCCchhHHHHHHHHH--H-hHHHhHHHHHHHHHHH-h-CCChh---------------HHHHHHHHHHHHHHHHHHHHH
Q 045564 49 KRGGRTALLSRTVTCL--T-LGEGWVANLMVYMIQE-F-HITSI---------------NSALISNIVNGFVNLFPVLGA 108 (296)
Q Consensus 49 ~~~~~~~~~~l~~~~~--~-~~y~~~~~l~~yl~~~-l-g~s~~---------------~a~~i~~~~~~~~~~~~l~~G 108 (296)
.+..+|.+..++..++ . +.+....+..-++-++ + |-+.. ...+-..++.....+.+..--
T Consensus 274 ~~~mpr~m~~L~i~~lltW~a~f~f~LF~TDfmG~~vy~GDp~a~~~S~a~~~Y~~GV~~G~~GL~ins~~lgi~S~~~~ 353 (498)
T KOG0637|consen 274 LKVMPRPMRMLLIVTLLTWIAWFPFLLFDTDFMGREVYGGDPKADENSEAKKLYNAGVRMGCLGLMLNSIVLGIYSLLVE 353 (498)
T ss_pred HhhCChhHHHHHHHHHHHHHHHHHHHHHHHHhcchHhhCCCCCCCcchhHHHHHHhccccchHHHHHHHHHHHHHHHHHH
Confidence 4456777777777666 3 4444333333333222 1 11111 113456677778888899999
Q ss_pred HHhhhhcchHHHHHHHHHHHHHHHHHHH
Q 045564 109 IIADSFLGSFQVIWISSFISLLGTILLD 136 (296)
Q Consensus 109 ~laDr~iGR~~~i~i~~~l~~ig~~~la 136 (296)
++.|| +|-|+.+..+...+.++..+..
T Consensus 354 ~l~~~-~g~r~~y~~~~~~f~~~~~~~g 380 (498)
T KOG0637|consen 354 KLSRK-FGTRKRYWGGVNAFGLATGLAG 380 (498)
T ss_pred HHHHh-cCcceEEeehhHHHHHHHHHHh
Confidence 99999 7966655555554444444433
No 303
>PF11299 DUF3100: Protein of unknown function (DUF3100); InterPro: IPR021450 Some members in this family of proteins are annotated as membrane proteins however this cannot be confirmed. Currently no function is known.
Probab=27.01 E-value=49 Score=29.48 Aligned_cols=24 Identities=13% Similarity=0.081 Sum_probs=18.9
Q ss_pred HHHHhhchhhhhhhhhhhccCCCc
Q 045564 173 LACLGLGGLRFTLATMGANQFEIP 196 (296)
Q Consensus 173 l~gig~g~~~~~~~~~~ad~f~~~ 196 (296)
-.|+|.|.+.+...+-+++++|+.
T Consensus 180 asGvGSgSMMaAa~~aL~~~~P~~ 203 (241)
T PF11299_consen 180 ASGVGSGSMMAAASGALAAAYPEM 203 (241)
T ss_pred HcCCcHHHHHHHHHHHHHHHCcch
Confidence 457888888888888888999944
No 304
>PF06645 SPC12: Microsomal signal peptidase 12 kDa subunit (SPC12); InterPro: IPR009542 This family consists of several microsomal signal peptidase 12 kDa subunit proteins. Translocation of polypeptide chains across the endoplasmic reticulum (ER) membrane is triggered by signal sequences. Subsequently, signal recognition particle interacts with its membrane receptor and the ribosome-bound nascent chain is targeted to the ER where it is transferred into a protein-conducting channel. At some point, a second signal sequence recognition event takes place in the membrane and translocation of the nascent chain through the membrane occurs. The signal sequence of most secretory and membrane proteins is cleaved off at this stage. Cleavage occurs by the signal peptidase complex (SPC) as soon as the lumenal domain of the translocating polypeptide is large enough to expose its cleavage site to the enzyme. The signal peptidase complex is possibly also involved in proteolytic events in the ER membrane other than the processing of the signal sequence, for example the further digestion of the cleaved signal peptide or the degradation of membrane proteins. Mammalian signal peptidase is as a complex of five different polypeptide chains. This family represents the 12 kDa subunit (SPC12).; GO: 0008233 peptidase activity, 0006465 signal peptide processing, 0005787 signal peptidase complex, 0016021 integral to membrane
Probab=26.34 E-value=2.5e+02 Score=20.22 Aligned_cols=26 Identities=12% Similarity=0.181 Sum_probs=18.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhh
Q 045564 89 SALISNIVNGFVNLFPVLGAIIADSF 114 (296)
Q Consensus 89 a~~i~~~~~~~~~~~~l~~G~laDr~ 114 (296)
+..+.........+.+.+.|++.+.+
T Consensus 9 ae~l~~~il~~~~iisfi~Gy~~q~~ 34 (76)
T PF06645_consen 9 AEKLMQYILIISAIISFIVGYITQSF 34 (76)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34455555666677777889998884
No 305
>PF10777 YlaC: Inner membrane protein YlaC; InterPro: IPR019713 The extracytoplasmic function (ECF) sigma factors are small regulatory proteins that are quite divergent in sequence relative to most other sigma factors. YlaC, regulated by YlaA, is important in oxidative stress resistance. It contributes to hydrogen peroxide resistance in Bacillus subtilis [].
Probab=25.78 E-value=2.1e+02 Score=23.65 Aligned_cols=37 Identities=14% Similarity=0.152 Sum_probs=20.8
Q ss_pred HHHhhhccccchhhHHHHHHHHHHHHHHHHhCCCchh
Q 045564 220 AFVYIEDNLSWRLGSGLNIAANLAGVVIFLSGKHFYF 256 (296)
Q Consensus 220 v~~~l~~~~gw~~~F~i~~~~~~~~~~~~~~~~~~~~ 256 (296)
+.-|-....||.+...+.+.+.+.+.++++=..|+|+
T Consensus 51 ~lm~~spy~G~~s~~~ftv~fv~m~~~llfDI~P~Yr 87 (155)
T PF10777_consen 51 ALMYYSPYFGLGSVWGFTVFFVVMAAFLLFDIKPRYR 87 (155)
T ss_pred HHHHhcchhhhHHHHHHHHHHHHHHHHHHhhccceee
Confidence 3344445566655444444444445555666788887
No 306
>PRK02237 hypothetical protein; Provisional
Probab=25.09 E-value=1.8e+02 Score=22.70 Aligned_cols=47 Identities=17% Similarity=0.175 Sum_probs=35.8
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhhhhcchHHHHHHHHHHHHHHHHH
Q 045564 87 INSALISNIVNGFVNLFPVLGAIIADSFLGSFQVIWISSFISLLGTIL 134 (296)
Q Consensus 87 ~~a~~i~~~~~~~~~~~~l~~G~laDr~iGR~~~i~i~~~l~~ig~~~ 134 (296)
+.++-+-..|.+..++.+++.+|..|. .-.-+-=.+|..+..+|..+
T Consensus 56 ~~~GRvYAAYGGvyI~~Sl~W~w~vdg-~~Pd~~D~iGa~v~L~G~~i 102 (109)
T PRK02237 56 AAFGRVYAAYGGVYVAGSLLWLWVVDG-VRPDRWDWIGAAICLVGMAV 102 (109)
T ss_pred hhhhhHHHHhhhHHHHHHHHHHHHhcC-cCCChhHHHhHHHHHHhHHH
Confidence 558889999999999999999999999 45444445566666666543
No 307
>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function.; GO: 0016020 membrane
Probab=23.51 E-value=1.5e+02 Score=23.14 Aligned_cols=48 Identities=17% Similarity=0.240 Sum_probs=37.0
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhhhhcchHHHHHHHHHHHHHHHHH
Q 045564 86 SINSALISNIVNGFVNLFPVLGAIIADSFLGSFQVIWISSFISLLGTIL 134 (296)
Q Consensus 86 ~~~a~~i~~~~~~~~~~~~l~~G~laDr~iGR~~~i~i~~~l~~ig~~~ 134 (296)
+..++-+-..|.+..++.+++.+|..|+ .-.-+-=.++..+..+|..+
T Consensus 53 p~~fGRvYAAYGGvfI~~Sl~W~w~vdg-~~Pd~~D~iGa~i~L~G~~i 100 (107)
T PF02694_consen 53 PAAFGRVYAAYGGVFIVASLLWGWLVDG-VRPDRWDWIGAAICLVGVAI 100 (107)
T ss_pred cccchhHHHHhhhhHHHHHHHHHhhhcC-cCCChHHHHhHHHHHHhHHh
Confidence 3677888999999999999999999999 45555555666666666544
No 308
>PF03988 DUF347: Repeat of Unknown Function (DUF347) ; InterPro: IPR007136 This repeat is found as four tandem repeats in a family of bacterial membrane proteins. Each repeat contains two transmembrane regions and a conserved tryptophan.
Probab=23.45 E-value=2.4e+02 Score=18.90 Aligned_cols=20 Identities=15% Similarity=0.243 Sum_probs=13.1
Q ss_pred HHHHHHHHHHHHhhhccccc
Q 045564 211 YASTVISSAAFVYIEDNLSW 230 (296)
Q Consensus 211 ~iG~~i~p~v~~~l~~~~gw 230 (296)
-+...+|..++-++.+..|+
T Consensus 8 ilt~~lGt~~~D~l~~~lgl 27 (55)
T PF03988_consen 8 ILTTTLGTTAGDFLSKTLGL 27 (55)
T ss_pred HHHHHhHHHHHHHHHhccCc
Confidence 34556677778888776554
No 309
>KOG4783 consensus Uncharacterized conserved protein [Function unknown]
Probab=23.24 E-value=2.6e+02 Score=21.32 Aligned_cols=19 Identities=16% Similarity=0.277 Sum_probs=12.6
Q ss_pred HHHHHhCCChhHHHHHHHH
Q 045564 77 YMIQEFHITSINSALISNI 95 (296)
Q Consensus 77 yl~~~lg~s~~~a~~i~~~ 95 (296)
.+.+.+|+|..++.....+
T Consensus 53 vleg~lgis~~da~iySaI 71 (102)
T KOG4783|consen 53 VLEGYLGISEVDADIYSAI 71 (102)
T ss_pred HHHHhcCcchhhhHHHHHH
Confidence 4567789998776544443
No 310
>PF06912 DUF1275: Protein of unknown function (DUF1275); InterPro: IPR010699 This family consists of several hypothetical bacterial proteins of around 200 residues in length. The function of this family is unknown although a few members are thought to be membrane proteins.
Probab=22.97 E-value=4.7e+02 Score=22.17 Aligned_cols=36 Identities=17% Similarity=0.085 Sum_probs=19.5
Q ss_pred HHHHHHHHHHHHHHHHhhhccccchhhHHHHHHHHHH
Q 045564 207 FILTYASTVISSAAFVYIEDNLSWRLGSGLNIAANLA 243 (296)
Q Consensus 207 y~~~~iG~~i~p~v~~~l~~~~gw~~~F~i~~~~~~~ 243 (296)
+...-++-.+|..+++++.+..+. +..+++.+..++
T Consensus 168 ~~~~i~~f~~Ga~~ga~l~~~~~~-~al~~~~~~l~~ 203 (209)
T PF06912_consen 168 YLLIILSFFIGAILGALLYRRLGF-WALLLPALLLLL 203 (209)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhh-HHHHHHHHHHHH
Confidence 444444555555666666666563 455655554443
No 311
>PF05992 SbmA_BacA: SbmA/BacA-like family; InterPro: IPR009248 The Rhizobium meliloti (Sinorhizobium meliloti) bacA gene encodes a function that is essential for bacterial differentiation into bacteroids within plant cells in the symbiosis between R. meliloti and alfalfa. An Escherichia coli homologue of BacA, SbmA, is implicated in the uptake of microcins and bleomycin. This family is likely to be a subfamily of the ABC transporter family.; GO: 0005215 transporter activity, 0006810 transport, 0009276 Gram-negative-bacterium-type cell wall, 0016021 integral to membrane
Probab=22.83 E-value=1e+02 Score=28.72 Aligned_cols=9 Identities=22% Similarity=0.283 Sum_probs=8.2
Q ss_pred HHHHHHHhc
Q 045564 257 PVIVASVKK 265 (296)
Q Consensus 257 ~v~~~~~~~ 265 (296)
|..+||.||
T Consensus 194 QkvEAAyRK 202 (315)
T PF05992_consen 194 QKVEAAYRK 202 (315)
T ss_pred HHHHHHHHH
Confidence 888999999
No 312
>PF04226 Transgly_assoc: Transglycosylase associated protein; InterPro: IPR007341 This bacterial protein is predicted to be an integral membrane protein. Some family members have been annotated as transglycosylase-associated proteins, but no experimental evidence is provided. This family was annotated based on the information in P76011 from SWISSPROT.; GO: 0016021 integral to membrane
Probab=21.36 E-value=2.5e+02 Score=18.31 Aligned_cols=28 Identities=14% Similarity=-0.001 Sum_probs=11.3
Q ss_pred HHHHHHHHHHHhhhccccchhhHHHHHH
Q 045564 212 ASTVISSAAFVYIEDNLSWRLGSGLNIA 239 (296)
Q Consensus 212 iG~~i~p~v~~~l~~~~gw~~~F~i~~~ 239 (296)
+|+.+|..+.+.+....++.+.-++.++
T Consensus 6 iGa~vGg~l~~~lg~~~~~~~~~~i~av 33 (48)
T PF04226_consen 6 IGAFVGGWLFGLLGINGGGSWGSFIVAV 33 (48)
T ss_pred HHHHHHHHHHHHhcccCCchHHHHHHHH
Confidence 3444444444433322233444444444
No 313
>PRK09546 zntB zinc transporter; Reviewed
Probab=21.21 E-value=1.7e+02 Score=27.05 Aligned_cols=25 Identities=16% Similarity=0.150 Sum_probs=15.9
Q ss_pred HHHHhhhccc------cchhhHHHHHHHHHH
Q 045564 219 AAFVYIEDNL------SWRLGSGLNIAANLA 243 (296)
Q Consensus 219 ~v~~~l~~~~------gw~~~F~i~~~~~~~ 243 (296)
+++|+-..|+ +|+++|++..+++++
T Consensus 279 ~IaGiyGMNf~~mPel~~~~gy~~~l~im~~ 309 (324)
T PRK09546 279 FLTGLFGVNLGGIPGGGWPFGFSIFCLLLVV 309 (324)
T ss_pred HHHhhhccccCCCCCcCCcchHHHHHHHHHH
Confidence 5666666554 488898876654433
No 314
>COG1296 AzlC Predicted branched-chain amino acid permease (azaleucine resistance) [Amino acid transport and metabolism]
Probab=20.75 E-value=4.2e+02 Score=23.67 Aligned_cols=42 Identities=12% Similarity=-0.031 Sum_probs=24.6
Q ss_pred hhhHHHH-HHHHHHHHHHHHHHHHHhhhccccchhhHHHHHHH
Q 045564 199 QGIFFNW-FFILTYASTVISSAAFVYIEDNLSWRLGSGLNIAA 240 (296)
Q Consensus 199 r~~~f~~-~y~~~~iG~~i~p~v~~~l~~~~gw~~~F~i~~~~ 240 (296)
..-+.++ .|...++|+.+|..++..+.+---|-.-|.+++.+
T Consensus 135 ~~~g~~l~~y~~Wv~~t~iGa~~G~~l~~~~~~GldFal~a~F 177 (238)
T COG1296 135 WMLGVALLAYLYWVVGTLIGALLGSLLPDPETIGLDFALPALF 177 (238)
T ss_pred hhhhhHHHHHHHHHHHHHHHHHhhhccCCHhhhhHHHHHHHHH
Confidence 3445555 67778888888877776654432233445555543
Done!