Query 045566
Match_columns 112
No_of_seqs 202 out of 1656
Neff 12.2
Searched_HMMs 29240
Date Mon Mar 25 05:20:07 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/045566.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/045566hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2ynn_A Coatomer subunit beta'; 100.0 3.4E-27 1.1E-31 135.8 15.1 111 1-111 16-129 (304)
2 3ow8_A WD repeat-containing pr 100.0 5.7E-27 2E-31 135.9 15.4 111 1-111 167-280 (321)
3 1vyh_C Platelet-activating fac 100.0 1.1E-26 3.7E-31 138.4 15.4 112 1-112 111-225 (410)
4 3ow8_A WD repeat-containing pr 100.0 4.6E-26 1.6E-30 132.1 16.5 109 1-109 209-320 (321)
5 1got_B GT-beta; complex (GTP-b 99.9 4.6E-26 1.6E-30 132.8 15.9 111 1-111 187-302 (340)
6 4gqb_B Methylosome protein 50; 99.9 6.6E-26 2.2E-30 132.6 15.5 112 1-112 130-248 (344)
7 4ery_A WD repeat-containing pr 99.9 1.6E-25 5.6E-30 128.9 16.9 112 1-112 26-140 (312)
8 4gqb_B Methylosome protein 50; 99.9 1.6E-25 5.4E-30 131.0 16.5 111 1-112 85-203 (344)
9 2ynn_A Coatomer subunit beta'; 99.9 3.9E-26 1.3E-30 131.4 13.1 111 1-111 58-173 (304)
10 4ery_A WD repeat-containing pr 99.9 4.3E-25 1.5E-29 127.1 17.2 112 1-112 68-182 (312)
11 1erj_A Transcriptional repress 99.9 2.8E-25 9.4E-30 131.7 15.8 111 1-111 126-239 (393)
12 1vyh_C Platelet-activating fac 99.9 1.5E-25 5.1E-30 133.5 14.5 111 1-111 153-266 (410)
13 2pbi_B Guanine nucleotide-bind 99.9 1E-24 3.5E-29 127.9 16.6 111 1-111 157-272 (354)
14 3vl1_A 26S proteasome regulato 99.9 2.8E-25 9.6E-30 131.9 13.8 112 1-112 142-280 (420)
15 3iz6_a 40S ribosomal protein R 99.9 1.1E-24 3.7E-29 128.7 16.0 111 1-111 252-376 (380)
16 3iz6_a 40S ribosomal protein R 99.9 1.1E-24 3.7E-29 128.7 16.0 111 1-111 208-330 (380)
17 2hes_X YDR267CP; beta-propelle 99.9 5.9E-25 2E-29 127.8 14.3 111 1-111 61-185 (330)
18 2pm7_B Protein transport prote 99.9 1.4E-24 4.9E-29 124.6 15.0 111 1-111 12-133 (297)
19 4g56_B MGC81050 protein; prote 99.9 9E-25 3.1E-29 128.2 14.4 110 1-110 229-343 (357)
20 1got_B GT-beta; complex (GTP-b 99.9 1.2E-24 4E-29 126.9 14.8 110 1-111 146-258 (340)
21 2aq5_A Coronin-1A; WD40 repeat 99.9 1.4E-24 4.8E-29 128.7 15.2 111 1-111 84-208 (402)
22 3fm0_A Protein CIAO1; WDR39,SG 99.9 4.1E-25 1.4E-29 129.1 12.6 111 1-111 19-137 (345)
23 1nr0_A Actin interacting prote 99.9 9.3E-25 3.2E-29 135.4 14.8 111 1-111 150-271 (611)
24 2pbi_B Guanine nucleotide-bind 99.9 3.4E-24 1.2E-28 125.6 16.1 112 1-112 199-317 (354)
25 1nr0_A Actin interacting prote 99.9 1.6E-24 5.5E-29 134.3 15.4 111 1-111 193-356 (611)
26 3fm0_A Protein CIAO1; WDR39,SG 99.9 7.3E-25 2.5E-29 128.0 12.8 111 1-111 64-182 (345)
27 4h5i_A Guanine nucleotide-exch 99.9 9.8E-25 3.3E-29 128.4 13.2 110 1-110 222-343 (365)
28 2xzm_R RACK1; ribosome, transl 99.9 6E-24 2E-28 124.0 15.2 109 1-109 24-148 (343)
29 2ymu_A WD-40 repeat protein; u 99.9 6E-24 2.1E-28 130.3 15.7 108 1-110 19-129 (577)
30 3frx_A Guanine nucleotide-bind 99.9 4.1E-24 1.4E-28 123.7 14.0 110 1-110 20-138 (319)
31 3f3f_A Nucleoporin SEH1; struc 99.9 7.7E-24 2.6E-28 122.4 15.0 112 1-112 14-145 (351)
32 3bg1_A Protein SEC13 homolog; 99.9 2.5E-24 8.5E-29 124.5 12.7 111 1-111 16-137 (316)
33 3lrv_A PRE-mRNA-splicing facto 99.9 7.6E-24 2.6E-28 123.5 14.8 111 1-112 128-246 (343)
34 2hes_X YDR267CP; beta-propelle 99.9 5.1E-24 1.7E-28 123.8 14.0 110 1-110 110-230 (330)
35 1erj_A Transcriptional repress 99.9 1.2E-23 4.1E-28 124.7 15.5 110 1-111 67-197 (393)
36 4e54_B DNA damage-binding prot 99.9 7.4E-24 2.5E-28 126.9 14.5 110 1-110 122-240 (435)
37 3lrv_A PRE-mRNA-splicing facto 99.9 8.9E-24 3E-28 123.2 14.4 110 1-111 173-293 (343)
38 3mmy_A MRNA export factor; mRN 99.9 9.6E-24 3.3E-28 123.0 14.6 112 1-112 42-162 (368)
39 3frx_A Guanine nucleotide-bind 99.9 8.1E-24 2.8E-28 122.5 14.0 110 1-111 68-186 (319)
40 4g56_B MGC81050 protein; prote 99.9 6E-24 2.1E-28 124.7 13.6 112 1-112 142-260 (357)
41 3k26_A Polycomb protein EED; W 99.9 5.4E-24 1.8E-28 124.1 13.3 111 1-111 72-193 (366)
42 1sq9_A Antiviral protein SKI8; 99.9 9.1E-24 3.1E-28 124.6 14.0 112 1-112 236-397 (397)
43 2ymu_A WD-40 repeat protein; u 99.9 9.3E-24 3.2E-28 129.5 14.3 105 1-107 470-577 (577)
44 3zwl_B Eukaryotic translation 99.9 2.4E-23 8.3E-28 121.4 15.2 111 1-111 35-152 (369)
45 3vu4_A KMHSV2; beta-propeller 99.9 7.8E-24 2.7E-28 124.2 12.9 111 1-111 198-337 (355)
46 3vl1_A 26S proteasome regulato 99.9 2.2E-23 7.6E-28 123.8 14.2 109 3-111 102-213 (420)
47 2xzm_R RACK1; ribosome, transl 99.9 3.8E-23 1.3E-27 120.6 14.9 109 1-109 79-202 (343)
48 2w18_A PALB2, fancn, partner a 99.9 4.8E-23 1.7E-27 119.7 14.9 108 2-109 182-356 (356)
49 3dwl_C Actin-related protein 2 99.9 4E-25 1.4E-29 129.8 6.3 111 1-111 14-132 (377)
50 4aow_A Guanine nucleotide-bind 99.9 4.9E-23 1.7E-27 119.2 14.8 110 1-112 218-339 (340)
51 3mkq_A Coatomer beta'-subunit; 99.9 3.8E-23 1.3E-27 130.8 14.8 111 1-111 16-129 (814)
52 1k8k_C P40, ARP2/3 complex 41 99.9 3.8E-23 1.3E-27 120.9 13.8 111 1-111 11-128 (372)
53 3ei3_B DNA damage-binding prot 99.9 6.9E-23 2.4E-27 120.6 14.9 110 1-111 166-283 (383)
54 2pm7_B Protein transport prote 99.9 3.8E-23 1.3E-27 118.6 13.3 109 1-109 148-284 (297)
55 3dm0_A Maltose-binding peripla 99.9 6.3E-23 2.1E-27 128.6 14.8 111 1-111 433-551 (694)
56 3jrp_A Fusion protein of prote 99.9 4.5E-23 1.5E-27 120.7 13.1 111 1-111 14-135 (379)
57 1sq9_A Antiviral protein SKI8; 99.9 8.5E-23 2.9E-27 120.5 14.1 110 1-111 189-323 (397)
58 3dw8_B Serine/threonine-protei 99.9 1E-22 3.4E-27 121.7 14.4 111 1-112 229-375 (447)
59 1gxr_A ESG1, transducin-like e 99.9 2.9E-22 1E-26 115.7 15.8 111 1-111 100-215 (337)
60 1pgu_A Actin interacting prote 99.9 7.5E-23 2.6E-27 126.0 14.1 109 1-110 491-614 (615)
61 1gxr_A ESG1, transducin-like e 99.9 2.5E-22 8.7E-27 116.0 15.5 112 1-112 144-257 (337)
62 2aq5_A Coronin-1A; WD40 repeat 99.9 5.7E-23 1.9E-27 121.8 12.8 111 1-111 134-255 (402)
63 3dwl_C Actin-related protein 2 99.9 1.6E-23 5.5E-28 123.0 10.4 109 1-109 58-176 (377)
64 3sfz_A APAF-1, apoptotic pepti 99.9 2.7E-22 9.2E-27 131.5 16.8 112 1-112 618-734 (1249)
65 2oaj_A Protein SNI1; WD40 repe 99.9 2.7E-23 9.1E-28 133.5 11.9 107 1-108 491-659 (902)
66 2vdu_B TRNA (guanine-N(7)-)-me 99.9 1.7E-22 5.8E-27 121.4 14.4 111 1-112 152-273 (450)
67 4e54_B DNA damage-binding prot 99.9 3.9E-23 1.3E-27 123.8 11.5 110 1-111 212-328 (435)
68 3odt_A Protein DOA1; ubiquitin 99.9 2.5E-22 8.6E-27 115.1 13.6 108 1-111 187-297 (313)
69 3bg1_A Protein SEC13 homolog; 99.9 4.7E-23 1.6E-27 119.2 10.3 108 2-109 154-292 (316)
70 3dm0_A Maltose-binding peripla 99.9 3.3E-22 1.1E-26 125.4 14.5 110 1-110 385-503 (694)
71 2vdu_B TRNA (guanine-N(7)-)-me 99.9 8.3E-22 2.8E-26 118.4 15.6 112 1-112 105-231 (450)
72 3dw8_B Serine/threonine-protei 99.9 9.5E-23 3.2E-27 121.8 11.4 108 1-109 31-206 (447)
73 2oaj_A Protein SNI1; WD40 repe 99.9 2.7E-22 9.2E-27 128.9 14.0 109 1-111 20-130 (902)
74 3vu4_A KMHSV2; beta-propeller 99.9 1.4E-21 4.9E-26 114.6 16.0 106 4-111 143-272 (355)
75 2j04_A TAU60, YPL007P, hypothe 99.9 2.1E-22 7.2E-27 123.3 12.8 106 1-111 88-212 (588)
76 1r5m_A SIR4-interacting protei 99.9 1.2E-21 4.2E-26 116.0 15.5 110 1-111 48-181 (425)
77 4aow_A Guanine nucleotide-bind 99.9 1.1E-21 3.8E-26 113.6 14.9 111 1-111 41-160 (340)
78 3f3f_A Nucleoporin SEH1; struc 99.9 7.4E-22 2.5E-26 114.1 14.0 112 1-112 113-339 (351)
79 2j04_B YDR362CP, TAU91; beta p 99.9 1.2E-22 4E-27 124.4 11.1 110 1-111 269-387 (524)
80 2oit_A Nucleoporin 214KDA; NH2 99.9 1.3E-22 4.6E-27 121.8 11.1 109 1-109 95-222 (434)
81 4aez_A CDC20, WD repeat-contai 99.9 2E-21 6.7E-26 115.3 15.9 109 1-111 137-249 (401)
82 3ei3_B DNA damage-binding prot 99.9 8.7E-22 3E-26 116.0 14.3 108 1-109 76-193 (383)
83 2pm9_A Protein WEB1, protein t 99.9 2E-22 6.7E-27 119.4 11.4 111 1-111 70-198 (416)
84 3sfz_A APAF-1, apoptotic pepti 99.9 1.6E-21 5.4E-26 127.9 16.1 111 1-111 660-775 (1249)
85 3i2n_A WD repeat-containing pr 99.9 1.7E-22 5.7E-27 117.6 10.4 112 1-112 212-355 (357)
86 3gre_A Serine/threonine-protei 99.9 8.8E-23 3E-27 121.9 9.4 111 1-112 217-361 (437)
87 4a11_B DNA excision repair pro 99.9 2.1E-21 7.1E-26 114.6 14.9 112 1-112 189-367 (408)
88 4gq1_A NUP37; propeller, trans 99.9 3.3E-22 1.1E-26 118.6 11.4 111 1-111 139-287 (393)
89 1r5m_A SIR4-interacting protei 99.9 8.1E-22 2.8E-26 116.7 12.9 109 1-110 250-361 (425)
90 3gre_A Serine/threonine-protei 99.9 6.2E-22 2.1E-26 118.3 12.4 106 6-111 178-293 (437)
91 3jrp_A Fusion protein of prote 99.9 1.6E-21 5.4E-26 114.2 13.9 111 1-111 58-192 (379)
92 2pm9_A Protein WEB1, protein t 99.9 7.1E-22 2.4E-26 117.0 12.5 111 1-111 217-338 (416)
93 3k26_A Polycomb protein EED; W 99.9 6.1E-22 2.1E-26 115.4 11.9 109 1-111 118-261 (366)
94 2j04_B YDR362CP, TAU91; beta p 99.9 1E-22 3.5E-27 124.6 8.8 110 1-110 311-428 (524)
95 3mkq_A Coatomer beta'-subunit; 99.9 5.2E-22 1.8E-26 125.7 12.2 111 1-111 58-173 (814)
96 3i2n_A WD repeat-containing pr 99.9 1.1E-21 3.8E-26 114.1 12.7 111 1-111 68-200 (357)
97 3v7d_B Cell division control p 99.9 6.2E-21 2.1E-25 114.7 15.9 109 1-112 313-423 (464)
98 3jro_A Fusion protein of prote 99.9 7.4E-22 2.5E-26 124.9 11.9 111 1-111 12-133 (753)
99 1k8k_C P40, ARP2/3 complex 41 99.9 3.5E-21 1.2E-25 112.6 14.0 109 1-110 145-274 (372)
100 4h5i_A Guanine nucleotide-exch 99.9 1.6E-21 5.6E-26 114.8 12.6 109 2-112 137-302 (365)
101 1yfq_A Cell cycle arrest prote 99.9 1E-21 3.5E-26 113.9 11.3 109 1-110 14-131 (342)
102 2j04_A TAU60, YPL007P, hypothe 99.9 2.3E-21 7.8E-26 118.8 13.2 106 1-111 132-255 (588)
103 2xyi_A Probable histone-bindin 99.9 2.1E-20 7.3E-25 111.9 16.9 111 1-111 184-310 (430)
104 4gq1_A NUP37; propeller, trans 99.9 1.8E-22 6.2E-27 119.7 7.7 107 6-112 97-220 (393)
105 4ggc_A P55CDC, cell division c 99.9 2.2E-20 7.6E-25 107.3 16.1 108 2-111 29-139 (318)
106 4gga_A P55CDC, cell division c 99.9 2.2E-20 7.5E-25 111.5 16.4 108 2-111 109-219 (420)
107 3zwl_B Eukaryotic translation 99.9 1.4E-20 4.8E-25 109.7 15.3 112 1-112 178-306 (369)
108 4aez_A CDC20, WD repeat-contai 99.9 4E-21 1.4E-25 114.0 13.1 111 1-111 220-337 (401)
109 2xyi_A Probable histone-bindin 99.9 4.2E-21 1.4E-25 114.9 13.1 111 1-111 131-264 (430)
110 1pgu_A Actin interacting prote 99.9 1.1E-20 3.8E-25 116.3 15.0 110 1-111 163-284 (615)
111 4a11_B DNA excision repair pro 99.9 1.7E-20 5.8E-25 110.7 15.2 112 1-112 46-177 (408)
112 3mmy_A MRNA export factor; mRN 99.9 1.6E-20 5.5E-25 109.4 14.7 110 1-111 89-200 (368)
113 3v7d_B Cell division control p 99.9 2.5E-20 8.4E-25 112.1 15.2 108 5-112 275-383 (464)
114 3jro_A Fusion protein of prote 99.9 2E-20 7E-25 118.4 13.3 111 1-111 56-190 (753)
115 1yfq_A Cell cycle arrest prote 99.9 5.6E-20 1.9E-24 106.6 14.1 109 1-111 153-283 (342)
116 4gga_A P55CDC, cell division c 99.9 6.3E-20 2.1E-24 109.5 14.5 109 1-111 150-262 (420)
117 1p22_A F-BOX/WD-repeat protein 99.9 2.1E-19 7.3E-24 107.6 16.1 105 5-111 138-243 (435)
118 3odt_A Protein DOA1; ubiquitin 99.8 2.1E-19 7.2E-24 102.9 14.2 107 1-108 21-131 (313)
119 4ggc_A P55CDC, cell division c 99.8 5E-19 1.7E-23 101.6 14.7 110 1-112 70-183 (318)
120 2ovr_B FBW7, F-BOX/WD repeat p 99.8 1.1E-18 3.7E-23 104.7 15.3 106 2-111 243-349 (445)
121 1p22_A F-BOX/WD-repeat protein 99.8 6E-19 2.1E-23 105.6 13.9 105 2-110 260-365 (435)
122 2w18_A PALB2, fancn, partner a 99.8 3.1E-19 1.1E-23 103.9 12.1 94 18-111 155-270 (356)
123 2ovr_B FBW7, F-BOX/WD repeat p 99.8 2.6E-18 9E-23 103.0 16.4 107 2-112 283-393 (445)
124 2oit_A Nucleoporin 214KDA; NH2 99.8 3E-18 1E-22 103.0 14.4 110 1-111 152-279 (434)
125 1l0q_A Surface layer protein; 99.8 5.2E-18 1.8E-22 100.1 14.2 110 1-111 34-148 (391)
126 3bws_A Protein LP49; two-domai 99.8 4.3E-18 1.5E-22 101.5 13.9 111 1-111 172-293 (433)
127 3bws_A Protein LP49; two-domai 99.8 4.8E-18 1.6E-22 101.3 11.4 110 2-111 126-244 (433)
128 1l0q_A Surface layer protein; 99.8 4.5E-17 1.5E-21 96.1 14.5 109 2-111 119-234 (391)
129 2hqs_A Protein TOLB; TOLB, PAL 99.7 5.1E-16 1.8E-20 92.9 15.9 110 1-111 181-301 (415)
130 1nir_A Nitrite reductase; hemo 99.7 1.6E-15 5.6E-20 93.4 13.3 107 5-112 144-259 (543)
131 2hqs_A Protein TOLB; TOLB, PAL 99.7 5.2E-15 1.8E-19 88.5 14.9 110 2-112 226-346 (415)
132 2ecf_A Dipeptidyl peptidase IV 99.7 1.5E-15 5.1E-20 95.9 12.7 109 1-111 39-182 (741)
133 3vgz_A Uncharacterized protein 99.7 2.3E-14 7.8E-19 83.4 14.9 110 2-111 188-304 (353)
134 2ecf_A Dipeptidyl peptidase IV 99.6 4E-15 1.4E-19 93.9 11.8 98 2-101 112-230 (741)
135 3vgz_A Uncharacterized protein 99.6 1.6E-14 5.4E-19 84.0 13.3 111 2-112 144-264 (353)
136 1ri6_A Putative isomerase YBHE 99.6 4.4E-15 1.5E-19 85.9 10.7 109 1-110 40-160 (343)
137 1nir_A Nitrite reductase; hemo 99.6 2.5E-14 8.7E-19 88.2 14.2 109 2-111 182-312 (543)
138 1xfd_A DIP, dipeptidyl aminope 99.6 1.6E-15 5.5E-20 95.5 8.0 108 2-111 20-144 (723)
139 1z68_A Fibroblast activation p 99.6 4.5E-15 1.6E-19 93.5 9.6 107 3-111 20-140 (719)
140 3u4y_A Uncharacterized protein 99.6 8.4E-14 2.9E-18 80.5 14.1 108 3-110 44-160 (331)
141 2ojh_A Uncharacterized protein 99.6 5.8E-14 2E-18 79.5 13.1 110 2-111 132-259 (297)
142 1pby_B Quinohemoprotein amine 99.6 8E-14 2.7E-18 80.5 13.6 69 42-112 242-312 (337)
143 1xfd_A DIP, dipeptidyl aminope 99.6 2.3E-14 8E-19 90.2 12.1 98 1-100 63-193 (723)
144 1k32_A Tricorn protease; prote 99.6 3.5E-14 1.2E-18 92.9 12.7 107 2-109 382-501 (1045)
145 3o4h_A Acylamino-acid-releasin 99.6 1.5E-14 5.2E-19 89.4 10.0 104 3-108 154-274 (582)
146 1jmx_B Amine dehydrogenase; ox 99.6 3.4E-14 1.2E-18 82.5 10.7 108 3-110 4-134 (349)
147 1pby_B Quinohemoprotein amine 99.6 9.9E-14 3.4E-18 80.1 12.6 108 2-111 37-164 (337)
148 2ojh_A Uncharacterized protein 99.6 1.3E-13 4.3E-18 78.2 12.8 107 1-109 44-159 (297)
149 2z3z_A Dipeptidyl aminopeptida 99.6 2.9E-14 9.8E-19 89.7 10.3 109 2-111 124-294 (706)
150 3hfq_A Uncharacterized protein 99.6 7.3E-14 2.5E-18 81.4 10.9 107 2-109 43-170 (347)
151 3u4y_A Uncharacterized protein 99.6 4.4E-13 1.5E-17 77.5 13.9 110 2-111 131-253 (331)
152 1z68_A Fibroblast activation p 99.6 2.1E-14 7.2E-19 90.5 8.5 96 1-100 62-189 (719)
153 1ri6_A Putative isomerase YBHE 99.6 1.6E-13 5.5E-18 79.4 11.6 108 2-110 87-209 (343)
154 3scy_A Hypothetical bacterial 99.6 2.4E-13 8.1E-18 79.7 12.2 107 2-108 214-335 (361)
155 1jmx_B Amine dehydrogenase; ox 99.5 5.4E-13 1.9E-17 77.4 13.4 67 43-111 257-326 (349)
156 1k32_A Tricorn protease; prote 99.5 1.2E-13 4.1E-18 90.4 11.4 108 2-111 341-462 (1045)
157 3scy_A Hypothetical bacterial 99.5 1.3E-12 4.5E-17 76.5 14.3 108 2-109 158-290 (361)
158 2z3z_A Dipeptidyl aminopeptida 99.5 2.5E-13 8.6E-18 85.5 10.8 94 1-98 84-199 (706)
159 1xip_A Nucleoporin NUP159; bet 99.5 1.1E-12 3.7E-17 78.0 12.6 102 1-110 90-191 (388)
160 3hfq_A Uncharacterized protein 99.5 2.8E-12 9.7E-17 74.7 13.9 110 2-111 190-320 (347)
161 4a5s_A Dipeptidyl peptidase 4 99.5 3.5E-13 1.2E-17 85.6 7.9 107 2-111 20-142 (740)
162 3azo_A Aminopeptidase; POP fam 99.4 2.4E-12 8.1E-17 80.6 10.3 110 2-111 133-275 (662)
163 3o4h_A Acylamino-acid-releasin 99.4 6.8E-12 2.3E-16 77.7 11.9 106 3-112 114-229 (582)
164 1jof_A Carboxy-CIS,CIS-muconat 99.4 2.6E-11 9E-16 71.4 13.8 108 2-109 148-290 (365)
165 1jof_A Carboxy-CIS,CIS-muconat 99.4 4.9E-12 1.7E-16 74.5 9.9 109 2-111 43-178 (365)
166 1q7f_A NHL, brain tumor CG1071 99.4 1.3E-10 4.4E-15 66.2 14.1 106 2-110 167-280 (286)
167 3pe7_A Oligogalacturonate lyas 99.4 2.1E-11 7.1E-16 71.9 11.0 109 4-112 41-179 (388)
168 4a5s_A Dipeptidyl peptidase 4 99.4 9.5E-12 3.3E-16 79.1 9.9 96 3-100 66-191 (740)
169 2xdw_A Prolyl endopeptidase; a 99.4 3.5E-11 1.2E-15 76.3 12.2 108 2-110 128-268 (710)
170 3azo_A Aminopeptidase; POP fam 99.4 3.6E-11 1.2E-15 75.4 12.1 108 2-110 191-325 (662)
171 2bkl_A Prolyl endopeptidase; m 99.3 2.4E-11 8.4E-16 76.8 9.8 108 2-110 124-261 (695)
172 2oiz_A Aromatic amine dehydrog 99.3 3.8E-11 1.3E-15 70.9 9.7 101 9-111 14-141 (361)
173 2dg1_A DRP35, lactonase; beta 99.3 8.2E-10 2.8E-14 64.0 14.8 109 2-110 48-171 (333)
174 3fvz_A Peptidyl-glycine alpha- 99.3 7.8E-10 2.7E-14 64.4 14.1 108 1-108 26-173 (329)
175 3fvz_A Peptidyl-glycine alpha- 99.3 1.6E-09 5.4E-14 63.1 15.2 109 2-111 94-228 (329)
176 1qks_A Cytochrome CD1 nitrite 99.2 9.9E-10 3.4E-14 68.4 14.2 103 9-112 166-277 (567)
177 2gop_A Trilobed protease; beta 99.2 7.3E-10 2.5E-14 64.5 12.6 97 1-100 61-190 (347)
178 1q7f_A NHL, brain tumor CG1071 99.2 1.7E-09 5.9E-14 61.5 13.8 106 2-109 124-237 (286)
179 1qks_A Cytochrome CD1 nitrite 99.2 1.3E-09 4.5E-14 67.9 14.0 75 2-77 200-281 (567)
180 1rwi_B Serine/threonine-protei 99.2 1E-09 3.6E-14 61.8 11.5 110 2-111 153-265 (270)
181 3sjl_D Methylamine dehydrogena 99.2 6.2E-10 2.1E-14 66.3 10.6 106 5-112 39-171 (386)
182 2oiz_A Aromatic amine dehydrog 99.2 8.1E-10 2.8E-14 65.2 11.1 107 3-109 54-181 (361)
183 3c5m_A Oligogalacturonate lyas 99.2 7.2E-10 2.4E-14 65.4 10.8 109 2-111 191-330 (396)
184 3sjl_D Methylamine dehydrogena 99.2 2.6E-09 8.9E-14 63.6 12.6 107 4-110 83-208 (386)
185 3pe7_A Oligogalacturonate lyas 99.2 5.5E-09 1.9E-13 61.6 13.7 109 3-111 85-226 (388)
186 1yr2_A Prolyl oligopeptidase; 99.2 7.9E-10 2.7E-14 70.5 10.6 108 2-111 166-304 (741)
187 2mad_H Methylamine dehydrogena 99.2 1.3E-08 4.6E-13 60.4 15.2 106 3-111 70-196 (373)
188 2xdw_A Prolyl endopeptidase; a 99.1 4.9E-09 1.7E-13 66.6 13.9 110 2-111 174-321 (710)
189 3no2_A Uncharacterized protein 99.1 2.7E-09 9.2E-14 61.0 11.4 97 9-108 4-106 (276)
190 3e5z_A Putative gluconolactona 99.1 8.6E-09 3E-13 59.0 12.9 93 2-96 31-131 (296)
191 3no2_A Uncharacterized protein 99.1 5.1E-09 1.7E-13 59.8 11.8 109 2-112 80-197 (276)
192 3c5m_A Oligogalacturonate lyas 99.1 3.8E-10 1.3E-14 66.6 7.3 110 2-112 39-179 (396)
193 1xip_A Nucleoporin NUP159; bet 99.1 3.9E-09 1.4E-13 63.0 11.4 103 1-111 40-156 (388)
194 2mad_H Methylamine dehydrogena 99.1 1.5E-08 5.2E-13 60.2 13.8 103 7-112 29-158 (373)
195 2dg1_A DRP35, lactonase; beta 99.1 5.5E-10 1.9E-14 64.8 6.6 108 1-111 8-122 (333)
196 1rwi_B Serine/threonine-protei 99.0 1.4E-08 4.7E-13 57.2 11.6 109 2-110 111-222 (270)
197 2gop_A Trilobed protease; beta 99.0 1.1E-08 3.7E-13 59.6 10.9 102 2-107 107-250 (347)
198 3e5z_A Putative gluconolactona 99.0 8.6E-08 2.9E-12 54.9 14.2 106 2-111 175-287 (296)
199 2bkl_A Prolyl endopeptidase; m 99.0 1.7E-08 5.8E-13 64.1 11.9 109 2-111 171-305 (695)
200 3dsm_A Uncharacterized protein 99.0 3.6E-08 1.2E-12 57.5 12.2 104 3-111 135-254 (328)
201 2iwa_A Glutamine cyclotransfer 99.0 1.5E-07 5.1E-12 53.6 14.0 110 2-112 24-137 (266)
202 3iuj_A Prolyl endopeptidase; h 99.0 1.6E-08 5.6E-13 64.2 11.1 108 2-111 132-269 (693)
203 3dsm_A Uncharacterized protein 99.0 8E-08 2.7E-12 56.0 13.0 104 4-111 49-162 (328)
204 3c75_H MADH, methylamine dehyd 98.9 2.1E-08 7.1E-13 60.6 10.2 102 8-111 82-210 (426)
205 3nok_A Glutaminyl cyclase; bet 98.9 1.2E-07 4E-12 53.9 12.3 106 3-112 59-166 (268)
206 3hrp_A Uncharacterized protein 98.9 1.2E-07 4.1E-12 57.0 13.0 108 2-111 134-250 (409)
207 3c75_H MADH, methylamine dehyd 98.9 9E-08 3.1E-12 57.9 11.9 105 3-108 122-246 (426)
208 1pjx_A Dfpase, DIISOPROPYLFLUO 98.9 2.4E-07 8.2E-12 53.2 12.9 109 2-110 175-299 (314)
209 2z2n_A Virginiamycin B lyase; 98.9 2.4E-07 8.2E-12 52.7 12.6 103 2-108 18-127 (299)
210 2z2n_A Virginiamycin B lyase; 98.9 3.1E-07 1.1E-11 52.2 12.8 104 2-108 60-169 (299)
211 3nol_A Glutamine cyclotransfer 98.9 2.4E-07 8.3E-12 52.5 12.0 108 3-112 47-157 (262)
212 3mbr_X Glutamine cyclotransfer 98.9 6.6E-07 2.3E-11 50.3 13.5 108 3-112 25-135 (243)
213 2hz6_A Endoplasmic reticulum t 98.8 6.6E-10 2.2E-14 65.8 1.1 101 9-112 8-113 (369)
214 1pjx_A Dfpase, DIISOPROPYLFLUO 98.8 3.5E-07 1.2E-11 52.5 12.2 108 2-111 120-257 (314)
215 1yr2_A Prolyl oligopeptidase; 98.8 4.8E-07 1.7E-11 58.0 13.3 109 2-111 212-351 (741)
216 3g4e_A Regucalcin; six bladed 98.7 1.6E-06 5.3E-11 49.9 13.2 98 2-99 152-261 (297)
217 1mda_H Methylamine dehydrogena 98.7 1.1E-07 3.8E-12 56.5 8.2 87 21-109 47-157 (368)
218 2qc5_A Streptogramin B lactona 98.7 2.1E-06 7.1E-11 48.8 12.8 106 2-109 23-133 (300)
219 3hrp_A Uncharacterized protein 98.7 2.1E-06 7.3E-11 51.7 13.2 109 2-111 222-355 (409)
220 2qc5_A Streptogramin B lactona 98.7 2.2E-06 7.4E-11 48.7 12.8 104 2-108 65-174 (300)
221 2hz6_A Endoplasmic reticulum t 98.7 4.7E-10 1.6E-14 66.4 -2.6 105 7-112 46-151 (369)
222 3g4e_A Regucalcin; six bladed 98.6 5.2E-06 1.8E-10 47.7 13.4 111 2-112 101-231 (297)
223 2qe8_A Uncharacterized protein 98.6 1.3E-06 4.4E-11 51.2 10.7 109 2-111 20-155 (343)
224 3dr2_A Exported gluconolactona 98.6 6.3E-06 2.2E-10 47.5 12.6 107 2-110 89-224 (305)
225 3dr2_A Exported gluconolactona 98.6 7.8E-06 2.7E-10 47.1 12.5 91 3-96 49-147 (305)
226 2qe8_A Uncharacterized protein 98.5 8.1E-06 2.8E-10 47.9 12.6 106 2-107 70-223 (343)
227 1mda_H Methylamine dehydrogena 98.5 3.9E-07 1.3E-11 54.2 6.4 104 3-110 69-194 (368)
228 1kb0_A Quinohemoprotein alcoho 98.5 3E-06 1E-10 54.1 10.4 102 11-112 328-509 (677)
229 2iwa_A Glutamine cyclotransfer 98.4 2E-05 6.7E-10 45.0 11.7 105 5-110 111-237 (266)
230 2ghs_A AGR_C_1268P; regucalcin 98.4 4E-05 1.4E-09 44.7 13.5 98 2-100 182-292 (326)
231 3iuj_A Prolyl endopeptidase; h 98.4 7.4E-05 2.5E-09 47.8 15.1 109 2-111 178-315 (693)
232 2ghs_A AGR_C_1268P; regucalcin 98.4 4.7E-05 1.6E-09 44.4 13.3 104 2-108 137-258 (326)
233 2ece_A 462AA long hypothetical 98.4 3.6E-05 1.2E-09 47.1 12.6 106 4-109 193-351 (462)
234 1yiq_A Quinohemoprotein alcoho 98.4 1.4E-05 4.9E-10 51.2 11.0 51 62-112 455-507 (689)
235 2xe4_A Oligopeptidase B; hydro 98.3 6.7E-06 2.3E-10 53.0 9.4 107 2-111 177-305 (751)
236 1fwx_A Nitrous oxide reductase 98.3 2.8E-05 9.7E-10 48.9 11.1 89 21-110 255-361 (595)
237 1kb0_A Quinohemoprotein alcoho 98.3 2.5E-05 8.6E-10 49.9 10.8 76 20-96 457-536 (677)
238 2ece_A 462AA long hypothetical 98.3 4E-05 1.4E-09 46.9 10.7 104 4-108 143-287 (462)
239 3q7m_A Lipoprotein YFGL, BAMB; 98.2 0.00011 3.8E-09 43.4 12.5 101 9-112 52-164 (376)
240 1yiq_A Quinohemoprotein alcoho 98.2 2.3E-05 7.9E-10 50.2 9.6 76 20-96 455-534 (689)
241 3q7m_A Lipoprotein YFGL, BAMB; 98.2 6.5E-05 2.2E-09 44.4 10.7 102 9-112 102-209 (376)
242 1fwx_A Nitrous oxide reductase 98.1 3.4E-05 1.2E-09 48.6 8.3 98 2-99 280-407 (595)
243 2ad6_A Methanol dehydrogenase 98.1 0.0002 7E-09 45.0 11.3 52 61-112 443-496 (571)
244 1k3i_A Galactose oxidase precu 98.0 0.00036 1.2E-08 44.5 11.7 109 3-111 190-324 (656)
245 3nok_A Glutaminyl cyclase; bet 98.0 0.00051 1.7E-08 39.3 10.8 100 9-112 104-212 (268)
246 3pbp_A Nucleoporin NUP82; beta 98.0 0.00078 2.7E-08 41.1 12.1 102 2-105 69-207 (452)
247 3nol_A Glutamine cyclotransfer 98.0 0.00047 1.6E-08 39.3 10.6 93 6-99 132-244 (262)
248 2xe4_A Oligopeptidase B; hydro 97.9 0.00064 2.2E-08 44.1 12.2 70 3-72 225-305 (751)
249 1npe_A Nidogen, entactin; glyc 97.9 0.00064 2.2E-08 38.4 14.3 109 2-111 125-239 (267)
250 3hxj_A Pyrrolo-quinoline quino 97.9 0.00061 2.1E-08 39.3 10.8 98 4-108 142-242 (330)
251 2p9w_A MAL S 1 allergenic prot 97.9 0.00099 3.4E-08 39.3 14.9 109 2-110 66-215 (334)
252 1flg_A Protein (quinoprotein e 97.9 0.0005 1.7E-08 43.4 10.5 52 61-112 465-518 (582)
253 1kv9_A Type II quinohemoprotei 97.8 0.00037 1.3E-08 44.7 9.8 52 61-112 437-490 (668)
254 1w6s_A Methanol dehydrogenase 97.8 0.0013 4.3E-08 41.9 11.8 52 61-112 452-505 (599)
255 3tc9_A Hypothetical hydrolase; 97.8 0.0017 5.8E-08 39.5 13.2 106 2-109 182-300 (430)
256 3mbr_X Glutamine cyclotransfer 97.8 0.0013 4.3E-08 37.2 11.0 99 10-112 74-181 (243)
257 3qqz_A Putative uncharacterize 97.7 0.0016 5.4E-08 37.1 14.3 106 2-108 30-149 (255)
258 1npe_A Nidogen, entactin; glyc 97.7 0.0017 5.9E-08 36.6 15.6 108 2-109 39-154 (267)
259 3tc9_A Hypothetical hydrolase; 97.7 0.003 1E-07 38.5 11.7 108 2-110 140-257 (430)
260 2p4o_A Hypothetical protein; p 97.6 0.0032 1.1E-07 36.4 15.7 107 2-110 35-147 (306)
261 3hxj_A Pyrrolo-quinoline quino 97.5 0.0028 9.7E-08 36.5 9.9 95 10-111 107-204 (330)
262 2ad6_A Methanol dehydrogenase 97.5 0.0025 8.6E-08 40.2 9.7 77 19-96 443-523 (571)
263 2fp8_A Strictosidine synthase; 97.5 0.0042 1.4E-07 36.0 12.8 106 3-110 84-216 (322)
264 1kv9_A Type II quinohemoprotei 97.4 0.0095 3.3E-07 38.4 12.4 94 19-112 177-335 (668)
265 2fp8_A Strictosidine synthase; 97.4 0.006 2E-07 35.4 13.5 106 2-110 188-313 (322)
266 1flg_A Protein (quinoprotein e 97.3 0.0031 1.1E-07 39.9 8.9 77 19-96 465-545 (582)
267 4hw6_A Hypothetical protein, I 97.2 0.012 4E-07 36.0 11.5 107 2-109 185-303 (433)
268 1tl2_A L10, protein (tachylect 97.2 0.0019 6.5E-08 36.1 6.2 97 1-103 43-156 (236)
269 1w6s_A Methanol dehydrogenase 97.0 0.018 6E-07 36.8 10.0 103 10-112 62-193 (599)
270 3qqz_A Putative uncharacterize 96.9 0.019 6.6E-07 32.7 14.2 105 2-108 124-251 (255)
271 4a2l_A BT_4663, two-component 96.9 0.039 1.3E-06 36.1 12.9 104 2-110 409-526 (795)
272 2p9w_A MAL S 1 allergenic prot 96.8 0.029 9.8E-07 33.3 11.8 98 3-100 17-157 (334)
273 4hw6_A Hypothetical protein, I 96.8 0.034 1.2E-06 34.0 11.2 109 2-111 142-260 (433)
274 3pbp_A Nucleoporin NUP82; beta 96.7 0.043 1.5E-06 33.8 13.8 90 20-110 41-158 (452)
275 3v64_C Agrin; beta propeller, 96.6 0.047 1.6E-06 32.3 14.5 108 2-109 76-190 (349)
276 2be1_A Serine/threonine-protei 96.5 0.0081 2.8E-07 35.6 5.5 103 10-112 10-132 (339)
277 4a2l_A BT_4663, two-component 96.5 0.084 2.9E-06 34.6 14.1 106 2-111 360-481 (795)
278 3v65_B Low-density lipoprotein 96.4 0.065 2.2E-06 32.2 13.8 108 2-109 119-233 (386)
279 1k3i_A Galactose oxidase precu 96.3 0.055 1.9E-06 34.8 8.7 92 20-111 369-498 (656)
280 1n7d_A LDL receptor, low-densi 96.2 0.056 1.9E-06 35.2 8.2 106 3-110 500-614 (699)
281 3v64_C Agrin; beta propeller, 96.2 0.088 3E-06 31.2 15.1 107 3-109 120-233 (349)
282 1ijq_A LDL receptor, low-densi 96.1 0.093 3.2E-06 30.6 14.4 107 2-108 33-150 (316)
283 1n7d_A LDL receptor, low-densi 96.0 0.081 2.8E-06 34.5 8.3 107 3-109 457-570 (699)
284 3amr_A 3-phytase; beta-propell 96.0 0.12 4.1E-06 31.0 11.2 97 10-109 40-161 (355)
285 1ijq_A LDL receptor, low-densi 95.7 0.14 4.7E-06 29.8 15.9 107 3-109 81-194 (316)
286 3kya_A Putative phosphatase; s 95.6 0.21 7.1E-06 31.4 12.6 106 3-109 143-277 (496)
287 3v65_B Low-density lipoprotein 95.6 0.18 6E-06 30.3 15.1 108 2-110 205-318 (386)
288 3p5b_L Low density lipoprotein 95.6 0.18 6.3E-06 30.4 14.9 108 2-109 115-233 (400)
289 3v9f_A Two-component system se 95.2 0.37 1.3E-05 31.6 11.4 104 2-110 410-524 (781)
290 3sov_A LRP-6, low-density lipo 95.1 0.25 8.6E-06 28.9 14.9 107 3-109 83-196 (318)
291 3p5b_L Low density lipoprotein 95.0 0.31 1.1E-05 29.5 16.6 107 3-109 163-276 (400)
292 3amr_A 3-phytase; beta-propell 95.0 0.3 1E-05 29.4 13.4 106 3-109 132-262 (355)
293 2ism_A Putative oxidoreductase 95.0 0.28 9.7E-06 29.1 11.4 93 2-97 34-152 (352)
294 3v9f_A Two-component system se 94.9 0.45 1.5E-05 31.2 12.9 105 2-111 453-569 (781)
295 2p4o_A Hypothetical protein; p 94.9 0.26 9E-06 28.4 10.2 70 41-111 32-105 (306)
296 2xzh_A Clathrin heavy chain 1; 94.9 0.33 1.1E-05 29.2 11.6 86 19-109 48-134 (365)
297 2xn4_A Kelch-like protein 2; s 94.6 0.31 1.1E-05 27.9 9.2 101 9-111 155-277 (302)
298 3m0c_C LDL receptor, low-densi 94.6 0.63 2.1E-05 31.0 16.3 107 3-109 475-588 (791)
299 3sbq_A Nitrous-oxide reductase 94.5 0.57 2E-05 30.3 9.0 88 22-109 300-407 (638)
300 3kya_A Putative phosphatase; s 94.4 0.55 1.9E-05 29.6 12.7 106 2-108 189-339 (496)
301 3sre_A PON1, serum paraoxonase 94.3 0.45 1.5E-05 28.5 11.4 91 19-109 138-251 (355)
302 2vpj_A Kelch-like protein 12; 94.3 0.38 1.3E-05 27.5 9.5 101 9-111 159-279 (301)
303 1bpo_A Protein (clathrin); cla 93.7 0.75 2.6E-05 28.9 10.2 87 18-109 46-133 (494)
304 1cru_A Protein (soluble quinop 93.7 0.73 2.5E-05 28.5 11.1 98 2-99 30-163 (454)
305 3a9g_A Putative uncharacterize 93.6 0.65 2.2E-05 27.6 10.1 94 2-97 32-152 (354)
306 3sbq_A Nitrous-oxide reductase 93.3 1 3.5E-05 29.2 10.6 69 3-71 327-408 (638)
307 3ii7_A Kelch-like protein 7; p 93.2 0.66 2.3E-05 26.6 9.8 101 9-111 55-179 (306)
308 3sov_A LRP-6, low-density lipo 93.1 0.74 2.5E-05 27.0 15.7 107 3-111 126-239 (318)
309 2xzh_A Clathrin heavy chain 1; 92.9 0.91 3.1E-05 27.4 9.2 71 3-73 264-334 (365)
310 4asc_A Kelch repeat and BTB do 92.7 0.83 2.8E-05 26.4 8.9 101 9-111 148-278 (315)
311 4gq2_M Nucleoporin NUP120; bet 92.6 0.22 7.4E-06 33.8 4.6 35 2-36 239-273 (950)
312 4asc_A Kelch repeat and BTB do 92.3 0.95 3.3E-05 26.1 8.7 61 51-111 148-222 (315)
313 3das_A Putative oxidoreductase 92.1 1.2 3.9E-05 26.8 12.5 97 2-98 35-158 (347)
314 4gq2_M Nucleoporin NUP120; bet 92.1 0.49 1.7E-05 32.2 5.7 37 42-78 237-273 (950)
315 4fhn_B Nucleoporin NUP120; pro 91.9 0.23 7.9E-06 34.3 4.1 34 3-36 242-275 (1139)
316 3m0c_C LDL receptor, low-densi 91.7 2.1 7.1E-05 28.7 16.1 110 2-111 517-633 (791)
317 1zgk_A Kelch-like ECH-associat 91.6 1.2 3.9E-05 25.7 8.2 101 9-111 121-241 (308)
318 2g8s_A Glucose/sorbosone dehyd 91.5 1.3 4.6E-05 26.3 9.7 95 2-97 21-147 (353)
319 2vpj_A Kelch-like protein 12; 91.4 1.2 4E-05 25.4 10.5 101 9-111 112-232 (301)
320 3sre_A PON1, serum paraoxonase 91.4 1.4 4.9E-05 26.4 11.5 96 2-100 168-287 (355)
321 2xn4_A Kelch-like protein 2; s 90.9 1.3 4.6E-05 25.2 9.1 101 9-111 108-230 (302)
322 1bpo_A Protein (clathrin); cla 90.5 2.2 7.5E-05 26.9 9.9 71 3-73 263-333 (494)
323 1zgk_A Kelch-like ECH-associat 90.3 1.6 5.5E-05 25.1 8.8 101 9-111 168-288 (308)
324 4a0p_A LRP6, LRP-6, low-densit 90.1 2.6 9E-05 27.3 15.4 107 2-108 40-153 (628)
325 2woz_A Kelch repeat and BTB do 90.1 1.7 5.9E-05 25.1 8.7 61 51-111 158-232 (318)
326 2xbg_A YCF48-like protein; pho 89.5 2 6.9E-05 25.1 12.8 65 2-68 166-231 (327)
327 4fhn_B Nucleoporin NUP120; pro 89.4 0.5 1.7E-05 32.7 4.0 37 42-78 239-275 (1139)
328 1tl2_A L10, protein (tachylect 89.4 1.9 6.4E-05 24.5 9.8 95 9-108 3-114 (236)
329 3zwu_A Alkaline phosphatase PH 89.2 3.2 0.00011 26.9 8.1 56 3-58 480-548 (592)
330 2xbg_A YCF48-like protein; pho 89.0 2.3 7.7E-05 24.9 11.7 101 3-107 209-319 (327)
331 3ii7_A Kelch-like protein 7; p 88.7 2.2 7.4E-05 24.4 9.7 99 11-111 13-128 (306)
332 1xi4_A Clathrin heavy chain; a 88.7 4.3 0.00015 29.7 7.9 86 19-109 47-133 (1630)
333 2woz_A Kelch repeat and BTB do 88.6 2.3 7.8E-05 24.5 8.8 101 9-111 158-288 (318)
334 3f7f_A Nucleoporin NUP120; nuc 88.2 0.77 2.6E-05 30.4 4.0 27 86-112 226-252 (729)
335 3f7f_A Nucleoporin NUP120; nuc 87.8 1.7 5.8E-05 28.9 5.4 35 43-79 224-258 (729)
336 2wg3_C Hedgehog-interacting pr 86.4 4.4 0.00015 25.3 10.3 50 2-51 17-79 (463)
337 3ei3_A DNA damage-binding prot 86.2 7.1 0.00024 27.6 13.0 95 11-107 524-633 (1158)
338 2be1_A Serine/threonine-protei 85.6 3.2 0.00011 24.8 5.5 59 53-111 11-77 (339)
339 3s94_A LRP-6, low-density lipo 85.6 5.6 0.00019 25.8 14.3 96 2-97 352-452 (619)
340 3s94_A LRP-6, low-density lipo 84.9 6 0.00021 25.7 15.0 107 3-109 88-201 (619)
341 4a9v_A PHOX; hydrolase, beta-p 84.5 6.4 0.00022 25.6 8.2 56 3-58 480-548 (592)
342 3s25_A Hypothetical 7-bladed b 79.9 6.9 0.00024 22.8 11.4 98 5-109 59-175 (302)
343 3a9g_A Putative uncharacterize 79.1 7.9 0.00027 23.1 10.5 58 2-59 76-153 (354)
344 4a0p_A LRP6, LRP-6, low-densit 76.4 13 0.00046 24.2 16.7 107 2-111 126-238 (628)
345 2zwa_A Leucine carboxyl methyl 75.9 14 0.00049 24.3 10.4 104 8-111 499-636 (695)
346 1xi4_A Clathrin heavy chain; a 74.3 22 0.00074 26.5 7.0 70 3-72 263-332 (1630)
347 2zwa_A Leucine carboxyl methyl 74.1 16 0.00055 24.1 10.7 102 9-111 397-523 (695)
348 2ism_A Putative oxidoreductase 68.9 16 0.00053 21.7 8.5 66 41-109 31-113 (352)
349 3s25_A Hypothetical 7-bladed b 68.1 16 0.00053 21.4 10.3 90 4-99 109-203 (302)
350 2uvk_A YJHT; unknown function, 67.4 16 0.00056 21.4 9.3 47 62-108 168-224 (357)
351 2uvk_A YJHT; unknown function, 66.4 17 0.00059 21.3 9.1 90 9-100 19-128 (357)
352 3zwu_A Alkaline phosphatase PH 58.2 36 0.0012 22.3 7.9 54 44-97 479-548 (592)
353 1cru_A Protein (soluble quinop 52.6 40 0.0014 21.0 10.0 56 10-65 369-430 (454)
354 3ott_A Two-component system se 47.5 59 0.002 21.6 9.4 68 3-73 195-262 (758)
355 1ukf_A Avirulence protein AVRP 46.8 14 0.00048 20.2 2.0 29 3-31 123-152 (188)
356 3ei3_A DNA damage-binding prot 46.3 80 0.0027 22.7 14.0 69 1-69 556-634 (1158)
357 3mwp_A Nucleoprotein; structur 45.2 4.4 0.00015 25.4 -0.0 16 96-111 162-177 (577)
358 2g8s_A Glucose/sorbosone dehyd 41.1 56 0.0019 19.4 6.7 48 10-57 289-339 (353)
359 1q47_A Semaphorin 3A; beta pro 35.6 87 0.003 20.1 7.6 26 40-65 461-486 (495)
360 3q6k_A 43.2 kDa salivary prote 32.7 88 0.003 19.3 5.8 71 42-112 88-192 (381)
361 3ott_A Two-component system se 32.3 1.1E+02 0.0038 20.3 13.3 103 2-110 475-586 (758)
362 4a9v_A PHOX; hydrolase, beta-p 31.0 1.2E+02 0.004 20.2 8.7 57 42-98 477-549 (592)
363 4gz8_A Semaphorin-3A; multi-do 30.9 1.2E+02 0.0042 20.4 6.2 55 12-66 431-495 (667)
364 3das_A Putative oxidoreductase 30.5 92 0.0032 18.8 10.4 34 40-73 31-64 (347)
365 2hrv_A 2A cysteine proteinase; 29.8 54 0.0018 17.1 2.5 18 94-111 119-136 (142)
366 3al9_A Plexin-A2; beta-propell 28.6 1.2E+02 0.0042 19.7 5.5 56 11-66 414-476 (539)
367 1qiu_A Adenovirus fibre; fibre 28.5 84 0.0029 18.4 3.3 29 4-32 63-91 (264)
368 1z8r_A Coxsackievirus B4 polyp 26.2 83 0.0028 16.9 3.1 18 94-111 139-156 (166)
369 3qhy_B Beta-lactamase inhibito 25.2 1E+02 0.0036 17.7 9.7 85 19-107 41-126 (282)
370 2ldu_A Heat shock factor prote 25.0 62 0.0021 16.3 2.2 14 3-16 36-49 (125)
No 1
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=99.96 E-value=3.4e-27 Score=135.84 Aligned_cols=111 Identities=16% Similarity=0.256 Sum_probs=102.2
Q ss_pred CeeEEEcCCCCEEEEEcCCCcEEEEEcCCCCCcEEEeeccCCeeEEEEccCCCEEEEeeCCCcEEEeeCCCCCceEEecC
Q 045566 1 VLCSTWKDDGTTVFSGGCDKQVKMWPLLSGGQPVTVAMHDAPIKEVAWIPEMNLLATGSWDKTLKYWDTRQPNPVHTQQL 80 (112)
Q Consensus 1 v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~ 80 (112)
|.+++|+|+++++++++.|+.|++||+.+++.+..+..|..++.+++|+|+++++++++.|+.|++||+++++.+..+..
T Consensus 16 V~~~~fsp~~~~l~s~~~dg~v~lWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~ 95 (304)
T 2ynn_A 16 VKGIDFHPTEPWVLTTLYSGRVELWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGEKVVDFEA 95 (304)
T ss_dssp EEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTCCEEEEEEC
T ss_pred eEEEEECCCCCEEEEEcCCCcEEEEECCCCceeEEeeccCCcEEEEEEeCCCCEEEEECCCCEEEEEECCCCcEEEEEeC
Confidence 57899999999999999999999999998888888889999999999999999999999999999999999988766654
Q ss_pred ---CCeEEEEeeCCCEEEEEeCCCcEEEEECcCC
Q 045566 81 ---PDRCYALTVRYPLMVVGTADRNLVVFNLQNP 111 (112)
Q Consensus 81 ---~~~~~~~~~~~~~~~~~~~d~~v~~~d~~~~ 111 (112)
.+..++|+|+++++++++.|+.|++||++++
T Consensus 96 h~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~ 129 (304)
T 2ynn_A 96 HPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENN 129 (304)
T ss_dssp CSSCEEEEEECSSSSEEEEEETTSCEEEEEGGGT
T ss_pred CCCcEEEEEEcCCCCEEEEECCCCeEEEEECCCC
Confidence 4578999999999999999999999998764
No 2
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=99.96 E-value=5.7e-27 Score=135.88 Aligned_cols=111 Identities=23% Similarity=0.324 Sum_probs=101.7
Q ss_pred CeeEEEcCCCCEEEEEcCCCcEEEEEcCCCCCcEEEeeccCCeeEEEEccCCCEEEEeeCCCcEEEeeCCCCCceEEecC
Q 045566 1 VLCSTWKDDGTTVFSGGCDKQVKMWPLLSGGQPVTVAMHDAPIKEVAWIPEMNLLATGSWDKTLKYWDTRQPNPVHTQQL 80 (112)
Q Consensus 1 v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~ 80 (112)
|.+++|+|++++|++|+.|+.|++||+.+++.+..+..|..+|.+++|+|+++++++++.|+.|++||+++.+....+..
T Consensus 167 v~~~~~spdg~~lasg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spd~~~l~s~s~dg~i~iwd~~~~~~~~~~~~ 246 (321)
T 3ow8_A 167 ILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSG 246 (321)
T ss_dssp EEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCCCEEEECTTSCEEEEECTTSCEEEEETTTCCEEEEECC
T ss_pred EEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEcccCCceeEEEEcCCCCEEEEEcCCCeEEEEECCCcceeEEEcC
Confidence 46889999999999999999999999999988888999999999999999999999999999999999998887766654
Q ss_pred ---CCeEEEEeeCCCEEEEEeCCCcEEEEECcCC
Q 045566 81 ---PDRCYALTVRYPLMVVGTADRNLVVFNLQNP 111 (112)
Q Consensus 81 ---~~~~~~~~~~~~~~~~~~~d~~v~~~d~~~~ 111 (112)
.+..++|+|++.++++++.|+.|++||++++
T Consensus 247 h~~~v~~~~~sp~~~~l~s~s~D~~v~iwd~~~~ 280 (321)
T 3ow8_A 247 HASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTR 280 (321)
T ss_dssp CSSCEEEEEECTTSSEEEEEETTSCEEEEETTTT
T ss_pred CCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCC
Confidence 3568899999999999999999999999875
No 3
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=99.95 E-value=1.1e-26 Score=138.37 Aligned_cols=112 Identities=19% Similarity=0.252 Sum_probs=102.9
Q ss_pred CeeEEEcCCCCEEEEEcCCCcEEEEEcCCCCCcEEEeeccCCeeEEEEccCCCEEEEeeCCCcEEEeeCCCCCceEEecC
Q 045566 1 VLCSTWKDDGTTVFSGGCDKQVKMWPLLSGGQPVTVAMHDAPIKEVAWIPEMNLLATGSWDKTLKYWDTRQPNPVHTQQL 80 (112)
Q Consensus 1 v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~ 80 (112)
|++++|+|+++++++|+.|+.|++||+.+++....+.+|...|.+++|+|++.++++|+.|+.|++||+.+.+.+..+..
T Consensus 111 V~~~~~~p~~~~l~s~s~Dg~i~vwd~~~~~~~~~l~~h~~~V~~v~~~~~~~~l~sgs~D~~i~iwd~~~~~~~~~~~~ 190 (410)
T 1vyh_C 111 VTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHG 190 (410)
T ss_dssp EEEEEECSSSSEEEEEESSSCEEEEETTTCCCCEEECCCSSCEEEEEECTTSSEEEEEETTSCCCEEETTSSCEEECCCC
T ss_pred EEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEEeccCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEcC
Confidence 57899999999999999999999999999999999999999999999999999999999999999999998887766543
Q ss_pred ---CCeEEEEeeCCCEEEEEeCCCcEEEEECcCCC
Q 045566 81 ---PDRCYALTVRYPLMVVGTADRNLVVFNLQNPQ 112 (112)
Q Consensus 81 ---~~~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~ 112 (112)
.+.+++|+|++.++++++.|+.|++||+++++
T Consensus 191 h~~~V~~v~~~p~~~~l~s~s~D~~i~~wd~~~~~ 225 (410)
T 1vyh_C 191 HDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGY 225 (410)
T ss_dssp CSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCC
T ss_pred CCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCc
Confidence 45788999999999999999999999998763
No 4
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=99.95 E-value=4.6e-26 Score=132.11 Aligned_cols=109 Identities=18% Similarity=0.226 Sum_probs=100.4
Q ss_pred CeeEEEcCCCCEEEEEcCCCcEEEEEcCCCCCcEEEeeccCCeeEEEEccCCCEEEEeeCCCcEEEeeCCCCCceEEecC
Q 045566 1 VLCSTWKDDGTTVFSGGCDKQVKMWPLLSGGQPVTVAMHDAPIKEVAWIPEMNLLATGSWDKTLKYWDTRQPNPVHTQQL 80 (112)
Q Consensus 1 v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~ 80 (112)
|.+++|+|++++|++++.|+.|++||++..+....+.+|...|.+++|+|++.++++++.|+.|++||+++.+++..+..
T Consensus 209 v~~l~~spd~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~ 288 (321)
T 3ow8_A 209 IRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCVHTFFD 288 (321)
T ss_dssp CCEEEECTTSCEEEEECTTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECC
T ss_pred eeEEEEcCCCCEEEEEcCCCeEEEEECCCcceeEEEcCCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCEEEEEEcC
Confidence 57899999999999999999999999998888888999999999999999999999999999999999999888777644
Q ss_pred ---CCeEEEEeeCCCEEEEEeCCCcEEEEECc
Q 045566 81 ---PDRCYALTVRYPLMVVGTADRNLVVFNLQ 109 (112)
Q Consensus 81 ---~~~~~~~~~~~~~~~~~~~d~~v~~~d~~ 109 (112)
.+..++|++++..+++++.|+.|++||..
T Consensus 289 h~~~v~~v~~s~~g~~l~s~~~d~~i~vwd~p 320 (321)
T 3ow8_A 289 HQDQVWGVKYNGNGSKIVSVGDDQEIHIYDCP 320 (321)
T ss_dssp CSSCEEEEEECTTSSEEEEEETTCCEEEEECC
T ss_pred CCCcEEEEEECCCCCEEEEEeCCCeEEEEeCC
Confidence 45788999999999999999999999964
No 5
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=99.95 E-value=4.6e-26 Score=132.79 Aligned_cols=111 Identities=25% Similarity=0.365 Sum_probs=101.1
Q ss_pred CeeEEEcCCCCEEEEEcCCCcEEEEEcCCCCCcEEEeeccCCeeEEEEccCCCEEEEeeCCCcEEEeeCCCCCceEEecC
Q 045566 1 VLCSTWKDDGTTVFSGGCDKQVKMWPLLSGGQPVTVAMHDAPIKEVAWIPEMNLLATGSWDKTLKYWDTRQPNPVHTQQL 80 (112)
Q Consensus 1 v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~ 80 (112)
|.+++|+|+++++++|+.|+.|++||++++.....+..|...|.+++|+|++.++++++.|+.|++||+++.+.+..+..
T Consensus 187 v~~~~~~~~~~~l~sg~~d~~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~ 266 (340)
T 1got_B 187 VMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSH 266 (340)
T ss_dssp EEEEEECTTSSEEEEEETTSCEEEEETTTCSEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECC
T ss_pred eEEEEECCCCCEEEEEeCCCcEEEEECCCCeeEEEEcCCcCCEEEEEEcCCCCEEEEEcCCCcEEEEECCCCcEEEEEcc
Confidence 46899999999999999999999999999988888999999999999999999999999999999999998877665543
Q ss_pred -----CCeEEEEeeCCCEEEEEeCCCcEEEEECcCC
Q 045566 81 -----PDRCYALTVRYPLMVVGTADRNLVVFNLQNP 111 (112)
Q Consensus 81 -----~~~~~~~~~~~~~~~~~~~d~~v~~~d~~~~ 111 (112)
.+..++|+|++.++++++.|+.|++||++++
T Consensus 267 ~~~~~~v~~~~~s~~g~~l~~g~~d~~i~vwd~~~~ 302 (340)
T 1got_B 267 DNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKA 302 (340)
T ss_dssp TTCCSCEEEEEECTTSSEEEEEETTSEEEEEETTTC
T ss_pred CCcccceEEEEECCCCCEEEEECCCCeEEEEEcccC
Confidence 3467899999999999999999999998765
No 6
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=99.95 E-value=6.6e-26 Score=132.61 Aligned_cols=112 Identities=22% Similarity=0.306 Sum_probs=97.2
Q ss_pred CeeEEEcCCCCEEEEEcCCCcEEEEEcCCCCCcEEEeeccCCeeEEEEccCC-CEEEEeeCCCcEEEeeCCCCCceEEec
Q 045566 1 VLCSTWKDDGTTVFSGGCDKQVKMWPLLSGGQPVTVAMHDAPIKEVAWIPEM-NLLATGSWDKTLKYWDTRQPNPVHTQQ 79 (112)
Q Consensus 1 v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~~~~~~~~~~i~~w~~~~~~~~~~~~ 79 (112)
|.+++|+|++++|++|+.|+.|++||+.+++.+..+.+|...|.+++|++++ ..+++++.|+.|++||+++++....+.
T Consensus 130 V~~v~~spdg~~l~sgs~d~~i~iwd~~~~~~~~~~~~h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~ 209 (344)
T 4gqb_B 130 VSTVSVLSSGTQAVSGSKDICIKVWDLAQQVVLSSYRAHAAQVTCVAASPHKDSVFLSCSEDNRILLWDTRCPKPASQIG 209 (344)
T ss_dssp EEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECSSCTTEEEEEETTSCEEEEETTSSSCEEECC
T ss_pred EEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCcCCceEEEEecCCCCCceeeeccccccccccccccceeeeee
Confidence 5789999999999999999999999999999999999999999999999976 578999999999999999988776653
Q ss_pred C-----CCeEEEEeeC-CCEEEEEeCCCcEEEEECcCCC
Q 045566 80 L-----PDRCYALTVR-YPLMVVGTADRNLVVFNLQNPQ 112 (112)
Q Consensus 80 ~-----~~~~~~~~~~-~~~~~~~~~d~~v~~~d~~~~~ 112 (112)
. ....++|+|+ +.++++++.|+.|++||+++++
T Consensus 210 ~~~~~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~~~~ 248 (344)
T 4gqb_B 210 CSAPGYLPTSLAWHPQQSEVFVFGDENGTVSLVDTKSTS 248 (344)
T ss_dssp ----CCCEEEEEECSSCTTEEEEEETTSEEEEEESCC--
T ss_pred cceeeccceeeeecCCCCcceEEeccCCcEEEEECCCCc
Confidence 2 2457888885 5678899999999999998764
No 7
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=99.95 E-value=1.6e-25 Score=128.88 Aligned_cols=112 Identities=28% Similarity=0.448 Sum_probs=102.2
Q ss_pred CeeEEEcCCCCEEEEEcCCCcEEEEEcCCCCCcEEEeeccCCeeEEEEccCCCEEEEeeCCCcEEEeeCCCCCceEEecC
Q 045566 1 VLCSTWKDDGTTVFSGGCDKQVKMWPLLSGGQPVTVAMHDAPIKEVAWIPEMNLLATGSWDKTLKYWDTRQPNPVHTQQL 80 (112)
Q Consensus 1 v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~ 80 (112)
|.+++|+|++++|++++.|+.+++|+..+++....+..|...|.+++|+|+++++++++.|+.|++||+++.+.+..+..
T Consensus 26 v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~ 105 (312)
T 4ery_A 26 VSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKG 105 (312)
T ss_dssp EEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEEC
T ss_pred EEEEEECCCCCEEEEeeCCCeEEEEeCCCcccchhhccCCCceEEEEEcCCCCEEEEECCCCEEEEEECCCCcEEEEEcC
Confidence 57899999999999999999999999998888888889999999999999999999999999999999999887766654
Q ss_pred ---CCeEEEEeeCCCEEEEEeCCCcEEEEECcCCC
Q 045566 81 ---PDRCYALTVRYPLMVVGTADRNLVVFNLQNPQ 112 (112)
Q Consensus 81 ---~~~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~ 112 (112)
.+..+.|+|+++++++++.|+.|++||+++++
T Consensus 106 ~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~ 140 (312)
T 4ery_A 106 HSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGK 140 (312)
T ss_dssp CSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCC
T ss_pred CCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCE
Confidence 35678899999999999999999999998763
No 8
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=99.95 E-value=1.6e-25 Score=131.00 Aligned_cols=111 Identities=18% Similarity=0.320 Sum_probs=96.0
Q ss_pred CeeEEEcCCCCEEEEEcCCCcEEEEEcCCCCCcEEE----eeccCCeeEEEEccCCCEEEEeeCCCcEEEeeCCCCCceE
Q 045566 1 VLCSTWKDDGTTVFSGGCDKQVKMWPLLSGGQPVTV----AMHDAPIKEVAWIPEMNLLATGSWDKTLKYWDTRQPNPVH 76 (112)
Q Consensus 1 v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~----~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~ 76 (112)
|.+++|+|++ .+++|+.|+.|++||+.+++..... .+|...|++++|+|+++++++++.|+.|++||+++++.+.
T Consensus 85 v~~~~~s~d~-~l~~~s~dg~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d~~i~iwd~~~~~~~~ 163 (344)
T 4gqb_B 85 VADLTWVGER-GILVASDSGAVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKDICIKVWDLAQQVVLS 163 (344)
T ss_dssp EEEEEEETTT-EEEEEETTSEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEE
T ss_pred EEEEEEeCCC-eEEEEECCCEEEEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEE
Confidence 4689999985 6779999999999999988776533 4789999999999999999999999999999999998887
Q ss_pred EecC---CCeEEEEeeCCC-EEEEEeCCCcEEEEECcCCC
Q 045566 77 TQQL---PDRCYALTVRYP-LMVVGTADRNLVVFNLQNPQ 112 (112)
Q Consensus 77 ~~~~---~~~~~~~~~~~~-~~~~~~~d~~v~~~d~~~~~ 112 (112)
.+.. .+..++|++++. .+++++.|+.|++||+++++
T Consensus 164 ~~~~h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~ 203 (344)
T 4gqb_B 164 SYRAHAAQVTCVAASPHKDSVFLSCSEDNRILLWDTRCPK 203 (344)
T ss_dssp EECCCSSCEEEEEECSSCTTEEEEEETTSCEEEEETTSSS
T ss_pred EEcCcCCceEEEEecCCCCCceeeeccccccccccccccc
Confidence 7654 456788998875 78899999999999998764
No 9
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=99.94 E-value=3.9e-26 Score=131.40 Aligned_cols=111 Identities=21% Similarity=0.293 Sum_probs=98.1
Q ss_pred CeeEEEcCCCCEEEEEcCCCcEEEEEcCCCCCcEEEeeccCCeeEEEEccCCCEEEEeeCCCcEEEeeCCCCCce-EEec
Q 045566 1 VLCSTWKDDGTTVFSGGCDKQVKMWPLLSGGQPVTVAMHDAPIKEVAWIPEMNLLATGSWDKTLKYWDTRQPNPV-HTQQ 79 (112)
Q Consensus 1 v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~-~~~~ 79 (112)
|.+++|+|+++++++|+.|+.|++||+.+++.+..+..|...|.+++|+|+++++++++.|+.|++||+++...+ ..+.
T Consensus 58 v~~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~ 137 (304)
T 2ynn_A 58 VRAGKFIARKNWIIVGSDDFRIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFE 137 (304)
T ss_dssp EEEEEEEGGGTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEEGGGTTEEEEEEC
T ss_pred EEEEEEeCCCCEEEEECCCCEEEEEECCCCcEEEEEeCCCCcEEEEEEcCCCCEEEEECCCCeEEEEECCCCcchhhhhc
Confidence 467899999999999999999999999999999999999999999999999999999999999999999877443 3333
Q ss_pred ---CCCeEEEEee-CCCEEEEEeCCCcEEEEECcCC
Q 045566 80 ---LPDRCYALTV-RYPLMVVGTADRNLVVFNLQNP 111 (112)
Q Consensus 80 ---~~~~~~~~~~-~~~~~~~~~~d~~v~~~d~~~~ 111 (112)
..+.+++|+| ++..+++++.|+.|++||++++
T Consensus 138 ~h~~~v~~v~~~p~~~~~l~sgs~D~~v~iwd~~~~ 173 (304)
T 2ynn_A 138 GHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQS 173 (304)
T ss_dssp CCCSCEEEEEECTTCTTEEEEEETTSEEEEEETTCS
T ss_pred ccCCcEEEEEECCCCCCEEEEEeCCCeEEEEECCCC
Confidence 3457889998 5789999999999999998764
No 10
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=99.94 E-value=4.3e-25 Score=127.15 Aligned_cols=112 Identities=22% Similarity=0.380 Sum_probs=102.5
Q ss_pred CeeEEEcCCCCEEEEEcCCCcEEEEEcCCCCCcEEEeeccCCeeEEEEccCCCEEEEeeCCCcEEEeeCCCCCceEEecC
Q 045566 1 VLCSTWKDDGTTVFSGGCDKQVKMWPLLSGGQPVTVAMHDAPIKEVAWIPEMNLLATGSWDKTLKYWDTRQPNPVHTQQL 80 (112)
Q Consensus 1 v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~ 80 (112)
|.+++|+|++++|++++.|+.|++||+.+++....+..|...+.++.|+|++.++++++.|+.|++||+++.+.+..+..
T Consensus 68 v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~ 147 (312)
T 4ery_A 68 ISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPA 147 (312)
T ss_dssp EEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEEECC
T ss_pred eEEEEEcCCCCEEEEECCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCEEEEEecC
Confidence 46899999999999999999999999999998888999999999999999999999999999999999999887776654
Q ss_pred ---CCeEEEEeeCCCEEEEEeCCCcEEEEECcCCC
Q 045566 81 ---PDRCYALTVRYPLMVVGTADRNLVVFNLQNPQ 112 (112)
Q Consensus 81 ---~~~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~ 112 (112)
++..+.|++++.++++++.|+.|++||+++++
T Consensus 148 ~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~ 182 (312)
T 4ery_A 148 HSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQ 182 (312)
T ss_dssp CSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCC
T ss_pred CCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCCc
Confidence 45778899999999999999999999998753
No 11
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=99.94 E-value=2.8e-25 Score=131.67 Aligned_cols=111 Identities=20% Similarity=0.367 Sum_probs=99.9
Q ss_pred CeeEEEcCCCCEEEEEcCCCcEEEEEcCCCCCcEEEeeccCCeeEEEEccCCCEEEEeeCCCcEEEeeCCCCCceEEecC
Q 045566 1 VLCSTWKDDGTTVFSGGCDKQVKMWPLLSGGQPVTVAMHDAPIKEVAWIPEMNLLATGSWDKTLKYWDTRQPNPVHTQQL 80 (112)
Q Consensus 1 v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~ 80 (112)
|.+++|+|++++|++|+.|+.|++||+.+++....+.+|...|.+++|+|++..+++++.|+.|++||+++++....+..
T Consensus 126 v~~v~~s~dg~~l~s~~~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~ 205 (393)
T 1erj_A 126 IRSVCFSPDGKFLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLSI 205 (393)
T ss_dssp EEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEEC
T ss_pred EEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEccCCCCEEEEEEcCCCCEEEEecCCCcEEEEECCCCeeEEEEEc
Confidence 35899999999999999999999999998888888899999999999999999999999999999999998877655543
Q ss_pred --CCeEEEEee-CCCEEEEEeCCCcEEEEECcCC
Q 045566 81 --PDRCYALTV-RYPLMVVGTADRNLVVFNLQNP 111 (112)
Q Consensus 81 --~~~~~~~~~-~~~~~~~~~~d~~v~~~d~~~~ 111 (112)
....++++| ++.++++++.|+.|++||++++
T Consensus 206 ~~~v~~~~~~~~~~~~l~~~s~d~~v~iwd~~~~ 239 (393)
T 1erj_A 206 EDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETG 239 (393)
T ss_dssp SSCEEEEEECSTTCCEEEEEETTSCEEEEETTTC
T ss_pred CCCcEEEEEECCCCCEEEEEcCCCcEEEEECCCC
Confidence 456788888 8899999999999999998865
No 12
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=99.94 E-value=1.5e-25 Score=133.48 Aligned_cols=111 Identities=21% Similarity=0.252 Sum_probs=101.5
Q ss_pred CeeEEEcCCCCEEEEEcCCCcEEEEEcCCCCCcEEEeeccCCeeEEEEccCCCEEEEeeCCCcEEEeeCCCCCceEEecC
Q 045566 1 VLCSTWKDDGTTVFSGGCDKQVKMWPLLSGGQPVTVAMHDAPIKEVAWIPEMNLLATGSWDKTLKYWDTRQPNPVHTQQL 80 (112)
Q Consensus 1 v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~ 80 (112)
|.+++|+|++++|++|+.|+.|++||+.+.+.+..+.+|...|.+++|+|++.++++++.|+.|++||++++.++..+..
T Consensus 153 V~~v~~~~~~~~l~sgs~D~~i~iwd~~~~~~~~~~~~h~~~V~~v~~~p~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~ 232 (410)
T 1vyh_C 153 VQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTG 232 (410)
T ss_dssp EEEEEECTTSSEEEEEETTSCCCEEETTSSCEEECCCCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEEC
T ss_pred EEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEeC
Confidence 57899999999999999999999999998888888889999999999999999999999999999999999988776654
Q ss_pred ---CCeEEEEeeCCCEEEEEeCCCcEEEEECcCC
Q 045566 81 ---PDRCYALTVRYPLMVVGTADRNLVVFNLQNP 111 (112)
Q Consensus 81 ---~~~~~~~~~~~~~~~~~~~d~~v~~~d~~~~ 111 (112)
.+..+.+++++.++++++.|+.|++||++++
T Consensus 233 h~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~ 266 (410)
T 1vyh_C 233 HREWVRMVRPNQDGTLIASCSNDQTVRVWVVATK 266 (410)
T ss_dssp CSSCEEEEEECTTSSEEEEEETTSCEEEEETTTC
T ss_pred CCccEEEEEECCCCCEEEEEcCCCeEEEEECCCC
Confidence 3467888999999999999999999999875
No 13
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=99.94 E-value=1e-24 Score=127.86 Aligned_cols=111 Identities=16% Similarity=0.267 Sum_probs=100.6
Q ss_pred CeeEEEcCCCCEEEEEcCCCcEEEEEcCCCCCcEEEeeccCCeeEEEEcc--CCCEEEEeeCCCcEEEeeCCCCCceEEe
Q 045566 1 VLCSTWKDDGTTVFSGGCDKQVKMWPLLSGGQPVTVAMHDAPIKEVAWIP--EMNLLATGSWDKTLKYWDTRQPNPVHTQ 78 (112)
Q Consensus 1 v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~~~~~~~~~~~~i~~w~~~~~~~~~~~ 78 (112)
|.+++|+|++..+++++.|+.|++||+.+++.+..+.+|...+.+++++| ++..+++++.|+.|++||+++++.+..+
T Consensus 157 v~~~~~~~~~~~l~t~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~~~~~~~~~g~~l~sgs~Dg~v~~wd~~~~~~~~~~ 236 (354)
T 2pbi_B 157 LSACSFTNSDMQILTASGDGTCALWDVESGQLLQSFHGHGADVLCLDLAPSETGNTFVSGGCDKKAMVWDMRSGQCVQAF 236 (354)
T ss_dssp EEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECCCSSCCEEEEEETTSCEEEEETTTCCEEEEE
T ss_pred EEEEEEeCCCCEEEEEeCCCcEEEEeCCCCeEEEEEcCCCCCeEEEEEEeCCCCCEEEEEeCCCeEEEEECCCCcEEEEe
Confidence 45789999999999999999999999999999889999999999999988 5689999999999999999999887766
Q ss_pred cC---CCeEEEEeeCCCEEEEEeCCCcEEEEECcCC
Q 045566 79 QL---PDRCYALTVRYPLMVVGTADRNLVVFNLQNP 111 (112)
Q Consensus 79 ~~---~~~~~~~~~~~~~~~~~~~d~~v~~~d~~~~ 111 (112)
.. .+..++|+|++..+++++.|+.|++||++++
T Consensus 237 ~~h~~~v~~v~~~p~~~~l~s~s~D~~v~lwd~~~~ 272 (354)
T 2pbi_B 237 ETHESDVNSVRYYPSGDAFASGSDDATCRLYDLRAD 272 (354)
T ss_dssp CCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTT
T ss_pred cCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEECCCC
Confidence 54 4578899999999999999999999999864
No 14
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=99.94 E-value=2.8e-25 Score=131.87 Aligned_cols=112 Identities=20% Similarity=0.342 Sum_probs=99.7
Q ss_pred CeeEEEcCCCCEEEEEcCCCcEEEEEcCCCCCcEEEeeccCCeeEEEEccCCCEEEEeeCCCcEEEeeCCCCCceEEecC
Q 045566 1 VLCSTWKDDGTTVFSGGCDKQVKMWPLLSGGQPVTVAMHDAPIKEVAWIPEMNLLATGSWDKTLKYWDTRQPNPVHTQQL 80 (112)
Q Consensus 1 v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~ 80 (112)
|.+++|+|++++|++++.|+.|++||+.+++....+..|...|.+++|+|++..+++++.|+.|++||+++++.+..+..
T Consensus 142 v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~ 221 (420)
T 3vl1_A 142 ITKLKFFPSGEALISSSQDMQLKIWSVKDGSNPRTLIGHRATVTDIAIIDRGRNVLSASLDGTIRLWECGTGTTIHTFNR 221 (420)
T ss_dssp EEEEEECTTSSEEEEEETTSEEEEEETTTCCCCEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEECB
T ss_pred cEEEEECCCCCEEEEEeCCCeEEEEeCCCCcCceEEcCCCCcEEEEEEcCCCCEEEEEcCCCcEEEeECCCCceeEEeec
Confidence 57899999999999999999999999999999999999999999999999999999999999999999998887766542
Q ss_pred ---------------------------CCeEEEEeeCCCEEEEEeCCCcEEEEECcCCC
Q 045566 81 ---------------------------PDRCYALTVRYPLMVVGTADRNLVVFNLQNPQ 112 (112)
Q Consensus 81 ---------------------------~~~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~ 112 (112)
....++|+|+++++++++.|+.|++||+++++
T Consensus 222 ~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~ 280 (420)
T 3vl1_A 222 KENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGHVSGVITVHNVFSKE 280 (420)
T ss_dssp TTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEEETTSCEEEEETTTCC
T ss_pred CCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCCEEEEEcCCCeEEEEECCCCc
Confidence 22345567889999999999999999998763
No 15
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=99.94 E-value=1.1e-24 Score=128.67 Aligned_cols=111 Identities=19% Similarity=0.246 Sum_probs=96.3
Q ss_pred CeeEEEcCCCCEEEEEcCCCcEEEEEcCCCCCcEEEeecc-------CCeeEEEEccCCCEEEEeeCCCcEEEeeCCCCC
Q 045566 1 VLCSTWKDDGTTVFSGGCDKQVKMWPLLSGGQPVTVAMHD-------APIKEVAWIPEMNLLATGSWDKTLKYWDTRQPN 73 (112)
Q Consensus 1 v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~-------~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~ 73 (112)
|.+++|+|++++|++|+.|+.|++||+++++.+..+..+. ..+.+++|+|++.++++|+.|+.|++||....+
T Consensus 252 v~~v~~~p~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~dg~i~vwd~~~~~ 331 (380)
T 3iz6_a 252 INSVKFFPDGQRFGTGSDDGTCRLFDMRTGHQLQVYNREPDRNDNELPIVTSVAFSISGRLLFAGYSNGDCYVWDTLLAE 331 (380)
T ss_dssp CCEEEECTTSSEEEEECSSSCEEEEETTTTEEEEEECCCCSSSCCSSCSCSEEEECSSSSEEEEECTTSCEEEEETTTCC
T ss_pred eEEEEEecCCCeEEEEcCCCeEEEEECCCCcEEEEecccccccccccCceEEEEECCCCCEEEEEECCCCEEEEECCCCc
Confidence 5789999999999999999999999999887776664332 248999999999999999999999999998887
Q ss_pred ceEEe-------cCCCeEEEEeeCCCEEEEEeCCCcEEEEECcCC
Q 045566 74 PVHTQ-------QLPDRCYALTVRYPLMVVGTADRNLVVFNLQNP 111 (112)
Q Consensus 74 ~~~~~-------~~~~~~~~~~~~~~~~~~~~~d~~v~~~d~~~~ 111 (112)
.+..+ ...+.+++|+|++.++++|+.|+.|++|++...
T Consensus 332 ~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~D~~i~iW~~~~~ 376 (380)
T 3iz6_a 332 MVLNLGTLQNSHEGRISCLGLSSDGSALCTGSWDKNLKIWAFSGH 376 (380)
T ss_dssp EEEEECCSCSSCCCCCCEEEECSSSSEEEEECTTSCEEEEECCSS
T ss_pred eEEEEecccCCCCCceEEEEECCCCCEEEEeeCCCCEEEEecCCC
Confidence 66544 334678999999999999999999999998764
No 16
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=99.94 E-value=1.1e-24 Score=128.66 Aligned_cols=111 Identities=23% Similarity=0.358 Sum_probs=97.5
Q ss_pred CeeEEEcC-CCCEEEEEcCCCcEEEEEcCC-CCCcEEEeeccCCeeEEEEccCCCEEEEeeCCCcEEEeeCCCCCceEEe
Q 045566 1 VLCSTWKD-DGTTVFSGGCDKQVKMWPLLS-GGQPVTVAMHDAPIKEVAWIPEMNLLATGSWDKTLKYWDTRQPNPVHTQ 78 (112)
Q Consensus 1 v~~~~~~~-~~~~l~~~~~~~~v~~~~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~ 78 (112)
|.+++|++ +++.+++|+.|+.|++||++. .+....+.+|...|.+++|+|++.++++++.|+.|++||+++++.+..+
T Consensus 208 v~~~~~~~~~~~~l~sgs~D~~v~~wd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~lwd~~~~~~~~~~ 287 (380)
T 3iz6_a 208 VLSLSINSLNANMFISGSCDTTVRLWDLRITSRAVRTYHGHEGDINSVKFFPDGQRFGTGSDDGTCRLFDMRTGHQLQVY 287 (380)
T ss_dssp EEEEEECSSSCCEEEEEETTSCEEEEETTTTCCCCEEECCCSSCCCEEEECTTSSEEEEECSSSCEEEEETTTTEEEEEE
T ss_pred eEEEEeecCCCCEEEEEECCCeEEEEECCCCCcceEEECCcCCCeEEEEEecCCCeEEEEcCCCeEEEEECCCCcEEEEe
Confidence 35678877 889999999999999999974 4667788899999999999999999999999999999999998777655
Q ss_pred cC----------CCeEEEEeeCCCEEEEEeCCCcEEEEECcCC
Q 045566 79 QL----------PDRCYALTVRYPLMVVGTADRNLVVFNLQNP 111 (112)
Q Consensus 79 ~~----------~~~~~~~~~~~~~~~~~~~d~~v~~~d~~~~ 111 (112)
.. .+..++|+|+++++++++.|+.|++||+.++
T Consensus 288 ~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~dg~i~vwd~~~~ 330 (380)
T 3iz6_a 288 NREPDRNDNELPIVTSVAFSISGRLLFAGYSNGDCYVWDTLLA 330 (380)
T ss_dssp CCCCSSSCCSSCSCSEEEECSSSSEEEEECTTSCEEEEETTTC
T ss_pred cccccccccccCceEEEEECCCCCEEEEEECCCCEEEEECCCC
Confidence 33 1468999999999999999999999998765
No 17
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=99.94 E-value=5.9e-25 Score=127.75 Aligned_cols=111 Identities=18% Similarity=0.318 Sum_probs=88.3
Q ss_pred CeeEEEcCCCCEEEEEcCCCcEEEEEcCCC-------CCcEEEeeccCCeeEEEEccCCCEEEEeeCCCcEEEeeCCCC-
Q 045566 1 VLCSTWKDDGTTVFSGGCDKQVKMWPLLSG-------GQPVTVAMHDAPIKEVAWIPEMNLLATGSWDKTLKYWDTRQP- 72 (112)
Q Consensus 1 v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~-------~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~- 72 (112)
|.+++|+|++++|++++.|+.|++|+.... +....+.+|...|.+++|+|+++++++++.|+.|++||++..
T Consensus 61 v~~v~~sp~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~~las~s~D~~v~iwd~~~~~ 140 (330)
T 2hes_X 61 IRSVAWRPHTSLLAAGSFDSTVSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSNDGYYLATCSRDKSVWIWETDESG 140 (330)
T ss_dssp EEEEEECTTSSEEEEEETTSCEEEEEC-------CCCEEEEEEC----CEEEEEECTTSCEEEEEETTSCEEEEECCTTC
T ss_pred EEEEEECCCCCEEEEEeCCCcEEEEEcccCcCccccceeEEEEcCCCCcEEEEEECCCCCEEEEEeCCCEEEEEeccCCC
Confidence 568999999999999999999999998532 234567789999999999999999999999999999999533
Q ss_pred ---CceEEe---cCCCeEEEEeeCCCEEEEEeCCCcEEEEECcCC
Q 045566 73 ---NPVHTQ---QLPDRCYALTVRYPLMVVGTADRNLVVFNLQNP 111 (112)
Q Consensus 73 ---~~~~~~---~~~~~~~~~~~~~~~~~~~~~d~~v~~~d~~~~ 111 (112)
+.+..+ ...+..+.|+|++.++++++.|+.|++||.+++
T Consensus 141 ~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~iW~~~~~ 185 (330)
T 2hes_X 141 EEYECISVLQEHSQDVKHVIWHPSEALLASSSYDDTVRIWKDYDD 185 (330)
T ss_dssp CCCEEEEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEEEETT
T ss_pred CCeEEEEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCC
Confidence 233333 334678899999999999999999999997653
No 18
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=99.93 E-value=1.4e-24 Score=124.58 Aligned_cols=111 Identities=16% Similarity=0.292 Sum_probs=95.1
Q ss_pred CeeEEEcCCCCEEEEEcCCCcEEEEEcCCC--CCcEEEeeccCCeeEEEEcc--CCCEEEEeeCCCcEEEeeCCCCC--c
Q 045566 1 VLCSTWKDDGTTVFSGGCDKQVKMWPLLSG--GQPVTVAMHDAPIKEVAWIP--EMNLLATGSWDKTLKYWDTRQPN--P 74 (112)
Q Consensus 1 v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~--~~~~~~~~~~~~v~~~~~~~--~~~~~~~~~~~~~i~~w~~~~~~--~ 74 (112)
|.+++|+|+|++|++|+.|+.|++|++... +...++.+|...|.+++|++ ++.++++++.|+.|++||+++++ .
T Consensus 12 V~~~~~s~~g~~las~s~D~~v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~iWd~~~~~~~~ 91 (297)
T 2pm7_B 12 IHDAVMDYYGKRMATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVMIWKEENGRWSQ 91 (297)
T ss_dssp EEEEEECTTSSEEEEEETTSCEEEEEBCSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTTEEEEEEBSSSCBCC
T ss_pred eEEEEECCCCCEEEEEeCCCEEEEEecCCCCcEEEEEEccccCCeEEEEecCCCcCCEEEEEcCCCEEEEEEcCCCceEE
Confidence 578999999999999999999999998643 56778899999999999976 48999999999999999998763 3
Q ss_pred eEEe---cCCCeEEEEeeC--CCEEEEEeCCCcEEEEECcCC
Q 045566 75 VHTQ---QLPDRCYALTVR--YPLMVVGTADRNLVVFNLQNP 111 (112)
Q Consensus 75 ~~~~---~~~~~~~~~~~~--~~~~~~~~~d~~v~~~d~~~~ 111 (112)
+..+ ...+..++|+|+ +.++++++.|+.|++||++++
T Consensus 92 ~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~ 133 (297)
T 2pm7_B 92 IAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKEN 133 (297)
T ss_dssp CEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSS
T ss_pred EEEeecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCC
Confidence 3333 345678899987 789999999999999998764
No 19
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=99.93 E-value=9e-25 Score=128.22 Aligned_cols=110 Identities=17% Similarity=0.110 Sum_probs=96.1
Q ss_pred CeeEEEcCC-CCEEEEEcCCCcEEEEEcCCCCCcEEEeeccCCeeEEEEccCC-CEEEEeeCCCcEEEeeCCCCCceEEe
Q 045566 1 VLCSTWKDD-GTTVFSGGCDKQVKMWPLLSGGQPVTVAMHDAPIKEVAWIPEM-NLLATGSWDKTLKYWDTRQPNPVHTQ 78 (112)
Q Consensus 1 v~~~~~~~~-~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~~~~~~~~~~i~~w~~~~~~~~~~~ 78 (112)
+.+++|+|+ +.++++|+.|+.|++||+++++....+..|...|++++|+|++ .++++++.|+.|++||+++++.+...
T Consensus 229 v~~v~~sp~~~~~la~g~~d~~i~~wd~~~~~~~~~~~~~~~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~~~~~~~~ 308 (357)
T 4g56_B 229 PTSVTWHPEKDDTFACGDETGNVSLVNIKNPDSAQTSAVHSQNITGLAYSYHSSPFLASISEDCTVAVLDADFSEVFRDL 308 (357)
T ss_dssp EEEEEECTTSTTEEEEEESSSCEEEEESSCGGGCEEECCCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTSCEEEEEC
T ss_pred ccchhhhhcccceEEEeecccceeEEECCCCcEeEEEeccceeEEEEEEcCCCCCEEEEEeCCCEEEEEECCCCcEeEEC
Confidence 368999996 5688999999999999999999999999999999999999976 57899999999999999988776554
Q ss_pred c--CCCeEEEEee-CCCEEEEEeCCCcEEEEECcC
Q 045566 79 Q--LPDRCYALTV-RYPLMVVGTADRNLVVFNLQN 110 (112)
Q Consensus 79 ~--~~~~~~~~~~-~~~~~~~~~~d~~v~~~d~~~ 110 (112)
. ..+..++|+| ++.+|++++.|+.|++||+.+
T Consensus 309 ~H~~~V~~vafsP~d~~~l~s~s~Dg~v~iW~~~~ 343 (357)
T 4g56_B 309 SHRDFVTGVAWSPLDHSKFTTVGWDHKVLHHHLPS 343 (357)
T ss_dssp CCSSCEEEEEECSSSTTEEEEEETTSCEEEEECC-
T ss_pred CCCCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCC
Confidence 3 3567889998 788999999999999999865
No 20
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=99.93 E-value=1.2e-24 Score=126.90 Aligned_cols=110 Identities=20% Similarity=0.380 Sum_probs=98.4
Q ss_pred CeeEEEcCCCCEEEEEcCCCcEEEEEcCCCCCcEEEeeccCCeeEEEEccCCCEEEEeeCCCcEEEeeCCCCCceEEecC
Q 045566 1 VLCSTWKDDGTTVFSGGCDKQVKMWPLLSGGQPVTVAMHDAPIKEVAWIPEMNLLATGSWDKTLKYWDTRQPNPVHTQQL 80 (112)
Q Consensus 1 v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~ 80 (112)
|.++.|++++. +++++.|+.|++||+.+++....+.+|...|.+++|+|++.++++++.|+.|++||+++.+.+..+..
T Consensus 146 v~~~~~~~~~~-l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sg~~d~~v~~wd~~~~~~~~~~~~ 224 (340)
T 1got_B 146 LSCCRFLDDNQ-IVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTG 224 (340)
T ss_dssp EEEEEEEETTE-EEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCSEEEEECC
T ss_pred EEEEEECCCCc-EEEEECCCcEEEEECCCCcEEEEEcCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeeEEEEcC
Confidence 35778887765 88899999999999999988888999999999999999999999999999999999999887776654
Q ss_pred ---CCeEEEEeeCCCEEEEEeCCCcEEEEECcCC
Q 045566 81 ---PDRCYALTVRYPLMVVGTADRNLVVFNLQNP 111 (112)
Q Consensus 81 ---~~~~~~~~~~~~~~~~~~~d~~v~~~d~~~~ 111 (112)
.+..++|+|++.++++++.|+.|++||++++
T Consensus 225 h~~~v~~v~~~p~~~~l~s~s~d~~v~iwd~~~~ 258 (340)
T 1got_B 225 HESDINAICFFPNGNAFATGSDDATCRLFDLRAD 258 (340)
T ss_dssp CSSCEEEEEECTTSSEEEEEETTSCEEEEETTTT
T ss_pred CcCCEEEEEEcCCCCEEEEEcCCCcEEEEECCCC
Confidence 4578899999999999999999999999865
No 21
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.93 E-value=1.4e-24 Score=128.71 Aligned_cols=111 Identities=23% Similarity=0.348 Sum_probs=99.6
Q ss_pred CeeEEEcC-CCCEEEEEcCCCcEEEEEcCCC-------CCcEEEeeccCCeeEEEEccCC-CEEEEeeCCCcEEEeeCCC
Q 045566 1 VLCSTWKD-DGTTVFSGGCDKQVKMWPLLSG-------GQPVTVAMHDAPIKEVAWIPEM-NLLATGSWDKTLKYWDTRQ 71 (112)
Q Consensus 1 v~~~~~~~-~~~~l~~~~~~~~v~~~~~~~~-------~~~~~~~~~~~~v~~~~~~~~~-~~~~~~~~~~~i~~w~~~~ 71 (112)
|.+++|+| ++++|++|+.|+.|++|++.++ +....+..|...|.+++|+|++ ..+++++.|+.|++||+++
T Consensus 84 V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~ 163 (402)
T 2aq5_A 84 VLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGT 163 (402)
T ss_dssp EEEEEECTTCTTEEEEEETTSEEEEEECCTTCCSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETTSCEEEEETTT
T ss_pred EEEEEeCCCCCCEEEEEeCCCeEEEEEccCCCCccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCC
Confidence 57899999 9999999999999999999887 5677888999999999999987 6999999999999999999
Q ss_pred CCceEEe--c---CCCeEEEEeeCCCEEEEEeCCCcEEEEECcCC
Q 045566 72 PNPVHTQ--Q---LPDRCYALTVRYPLMVVGTADRNLVVFNLQNP 111 (112)
Q Consensus 72 ~~~~~~~--~---~~~~~~~~~~~~~~~~~~~~d~~v~~~d~~~~ 111 (112)
++.+..+ . ..+..++|+|++..+++++.|+.|++||++++
T Consensus 164 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~ 208 (402)
T 2aq5_A 164 GAAVLTLGPDVHPDTIYSVDWSRDGALICTSCRDKRVRVIEPRKG 208 (402)
T ss_dssp TEEEEEECTTTCCSCEEEEEECTTSSCEEEEETTSEEEEEETTTT
T ss_pred CCccEEEecCCCCCceEEEEECCCCCEEEEEecCCcEEEEeCCCC
Confidence 8877766 2 24578899999999999999999999999875
No 22
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=99.93 E-value=4.1e-25 Score=129.07 Aligned_cols=111 Identities=23% Similarity=0.386 Sum_probs=93.8
Q ss_pred CeeEEEcCCCCEEEEEcCCCcEEEEEcCCCCCcE---EEeeccCCeeEEEEccCCCEEEEeeCCCcEEEeeCCCCC--ce
Q 045566 1 VLCSTWKDDGTTVFSGGCDKQVKMWPLLSGGQPV---TVAMHDAPIKEVAWIPEMNLLATGSWDKTLKYWDTRQPN--PV 75 (112)
Q Consensus 1 v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~---~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~--~~ 75 (112)
|.+++|+|++++|++|+.|+.|++|++..+.... ...+|...|.+++|+|+++++++++.|+.+++|+..... .+
T Consensus 19 v~~l~~sp~g~~las~~~D~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~s~D~~v~iw~~~~~~~~~~ 98 (345)
T 3fm0_A 19 CWFLAWNPAGTLLASCGGDRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASASFDATTCIWKKNQDDFECV 98 (345)
T ss_dssp EEEEEECTTSSCEEEEETTSCEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSSEEEEEETTSCEEEEEECCC-EEEE
T ss_pred EEEEEECCCCCEEEEEcCCCeEEEEEcCCCcceeeeeeccccCCcEEEEEECCCCCEEEEEECCCcEEEEEccCCCeEEE
Confidence 4579999999999999999999999987665332 225789999999999999999999999999999987764 33
Q ss_pred EEec---CCCeEEEEeeCCCEEEEEeCCCcEEEEECcCC
Q 045566 76 HTQQ---LPDRCYALTVRYPLMVVGTADRNLVVFNLQNP 111 (112)
Q Consensus 76 ~~~~---~~~~~~~~~~~~~~~~~~~~d~~v~~~d~~~~ 111 (112)
..+. ..+..++|+|+++++++++.|+.|++||++++
T Consensus 99 ~~~~~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~ 137 (345)
T 3fm0_A 99 TTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEE 137 (345)
T ss_dssp EEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEECTT
T ss_pred EEccCCCCCceEEEEeCCCCEEEEEECCCeEEEEECCCC
Confidence 4443 35678999999999999999999999998764
No 23
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=99.93 E-value=9.3e-25 Score=135.37 Aligned_cols=111 Identities=14% Similarity=0.147 Sum_probs=99.3
Q ss_pred CeeEEEcCCCC-EEEEEcCCCcEEEEEcCCCCCcEEEeeccCCeeEEEEccCCCEEEEeeCCCcEEEeeCCCCCceEEec
Q 045566 1 VLCSTWKDDGT-TVFSGGCDKQVKMWPLLSGGQPVTVAMHDAPIKEVAWIPEMNLLATGSWDKTLKYWDTRQPNPVHTQQ 79 (112)
Q Consensus 1 v~~~~~~~~~~-~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~ 79 (112)
|.+++|+|++. .|++++.|+.+++||..+.+....+.+|...|.+++|+|+++++++++.|+.|++||..+++.+..+.
T Consensus 150 v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~~~~~~l~~H~~~V~~v~fspdg~~las~s~D~~i~lwd~~~g~~~~~~~ 229 (611)
T 1nr0_A 150 MNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFE 229 (611)
T ss_dssp EEEEEECSSSSCEEEEEETTSCEEEEETTTBEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEECB
T ss_pred ceEEEECCCCCeEEEEEeCCCeEEEEECCCCeEeeeeccccCceEEEEECCCCCEEEEEECCCcEEEEECCCCcEeeeec
Confidence 46899999987 69999999999999988877777888999999999999999999999999999999998887765542
Q ss_pred ----------CCCeEEEEeeCCCEEEEEeCCCcEEEEECcCC
Q 045566 80 ----------LPDRCYALTVRYPLMVVGTADRNLVVFNLQNP 111 (112)
Q Consensus 80 ----------~~~~~~~~~~~~~~~~~~~~d~~v~~~d~~~~ 111 (112)
..+..++|+|+++++++++.|+.|++||++++
T Consensus 230 ~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D~~v~lWd~~~~ 271 (611)
T 1nr0_A 230 DDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATL 271 (611)
T ss_dssp CTTSSSCSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTT
T ss_pred cccccccccCCCEEEEEECCCCCEEEEEeCCCeEEEEeCCCC
Confidence 24568899999999999999999999999875
No 24
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=99.93 E-value=3.4e-24 Score=125.64 Aligned_cols=112 Identities=26% Similarity=0.449 Sum_probs=98.6
Q ss_pred CeeEEEcC--CCCEEEEEcCCCcEEEEEcCCCCCcEEEeeccCCeeEEEEccCCCEEEEeeCCCcEEEeeCCCCCceEEe
Q 045566 1 VLCSTWKD--DGTTVFSGGCDKQVKMWPLLSGGQPVTVAMHDAPIKEVAWIPEMNLLATGSWDKTLKYWDTRQPNPVHTQ 78 (112)
Q Consensus 1 v~~~~~~~--~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~ 78 (112)
|.+++|+| +++.|++|+.|+.|++||+++++....+..|...|.+++|+|++..+++++.|+.|++||++..+.+..+
T Consensus 199 v~~~~~~~~~~g~~l~sgs~Dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~v~lwd~~~~~~~~~~ 278 (354)
T 2pbi_B 199 VLCLDLAPSETGNTFVSGGCDKKAMVWDMRSGQCVQAFETHESDVNSVRYYPSGDAFASGSDDATCRLYDLRADREVAIY 278 (354)
T ss_dssp EEEEEECCCSSCCEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEE
T ss_pred eEEEEEEeCCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEE
Confidence 35778877 5789999999999999999999988889999999999999999999999999999999999987766554
Q ss_pred cC-----CCeEEEEeeCCCEEEEEeCCCcEEEEECcCCC
Q 045566 79 QL-----PDRCYALTVRYPLMVVGTADRNLVVFNLQNPQ 112 (112)
Q Consensus 79 ~~-----~~~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~ 112 (112)
.. ....+.|+|++.++++++.|+.|++||+++++
T Consensus 279 ~~~~~~~~~~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~ 317 (354)
T 2pbi_B 279 SKESIIFGASSVDFSLSGRLLFAGYNDYTINVWDVLKGS 317 (354)
T ss_dssp CCTTCCSCEEEEEECTTSSEEEEEETTSCEEEEETTTCS
T ss_pred cCCCcccceeEEEEeCCCCEEEEEECCCcEEEEECCCCc
Confidence 32 34678899999999999999999999997753
No 25
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=99.93 E-value=1.6e-24 Score=134.31 Aligned_cols=111 Identities=17% Similarity=0.290 Sum_probs=96.5
Q ss_pred CeeEEEcCCCCEEEEEcCCCcEEEEEcCCCCCcEEEe-------eccCCeeEEEEccCCCEEEEeeCCCcEEEeeCCCCC
Q 045566 1 VLCSTWKDDGTTVFSGGCDKQVKMWPLLSGGQPVTVA-------MHDAPIKEVAWIPEMNLLATGSWDKTLKYWDTRQPN 73 (112)
Q Consensus 1 v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~~-------~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~ 73 (112)
|.+++|+|++++|++++.|+.|++||..+++....+. .|...|.+++|+|+++++++++.|+.|++||+++.+
T Consensus 193 V~~v~fspdg~~las~s~D~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D~~v~lWd~~~~~ 272 (611)
T 1nr0_A 193 VHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLK 272 (611)
T ss_dssp EEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTE
T ss_pred eEEEEECCCCCEEEEEECCCcEEEEECCCCcEeeeeccccccccccCCCEEEEEECCCCCEEEEEeCCCeEEEEeCCCCc
Confidence 5689999999999999999999999998888777663 689999999999999999999999999999998765
Q ss_pred ceEEe----------------------------------------------cCCCeEEEEeeCCCEEEEEeCCCcEEEEE
Q 045566 74 PVHTQ----------------------------------------------QLPDRCYALTVRYPLMVVGTADRNLVVFN 107 (112)
Q Consensus 74 ~~~~~----------------------------------------------~~~~~~~~~~~~~~~~~~~~~d~~v~~~d 107 (112)
.+..+ ...+..++|+|+++++++++.|+.|++||
T Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~v~~l~~spdg~~l~s~s~D~~v~~Wd 352 (611)
T 1nr0_A 273 VEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFVNPELGSIDQVRYGHNKAITALSSSADGKTLFSADAEGHINSWD 352 (611)
T ss_dssp EEEEEECCSSGGGCEEEEEECSSCEEEEETTCCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred eeeeecCCCCccceeEEEEEcCCEEEEEeCCCcEEEEeCCCCCcceEEcCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEE
Confidence 43322 12346788999999999999999999999
Q ss_pred CcCC
Q 045566 108 LQNP 111 (112)
Q Consensus 108 ~~~~ 111 (112)
++++
T Consensus 353 ~~~~ 356 (611)
T 1nr0_A 353 ISTG 356 (611)
T ss_dssp TTTC
T ss_pred CCCC
Confidence 9865
No 26
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=99.93 E-value=7.3e-25 Score=128.01 Aligned_cols=111 Identities=23% Similarity=0.340 Sum_probs=95.3
Q ss_pred CeeEEEcCCCCEEEEEcCCCcEEEEEcCCCC--CcEEEeeccCCeeEEEEccCCCEEEEeeCCCcEEEeeCCCCCc---e
Q 045566 1 VLCSTWKDDGTTVFSGGCDKQVKMWPLLSGG--QPVTVAMHDAPIKEVAWIPEMNLLATGSWDKTLKYWDTRQPNP---V 75 (112)
Q Consensus 1 v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~--~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~---~ 75 (112)
|.+++|+|++++|++|+.|+.+++|+..... ....+.+|...|.+++|+|+++++++++.|+.|++||+++... +
T Consensus 64 v~~~~~sp~g~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~ 143 (345)
T 3fm0_A 64 VRKVAWSPCGNYLASASFDATTCIWKKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECV 143 (345)
T ss_dssp EEEEEECTTSSEEEEEETTSCEEEEEECCC-EEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEECTTSCEEEE
T ss_pred EEEEEECCCCCEEEEEECCCcEEEEEccCCCeEEEEEccCCCCCceEEEEeCCCCEEEEEECCCeEEEEECCCCCCeEEE
Confidence 5689999999999999999999999987664 3557788999999999999999999999999999999987643 2
Q ss_pred EEe---cCCCeEEEEeeCCCEEEEEeCCCcEEEEECcCC
Q 045566 76 HTQ---QLPDRCYALTVRYPLMVVGTADRNLVVFNLQNP 111 (112)
Q Consensus 76 ~~~---~~~~~~~~~~~~~~~~~~~~~d~~v~~~d~~~~ 111 (112)
..+ ...+..++|+|++.++++++.|+.|++||++++
T Consensus 144 ~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~i~~w~~~~~ 182 (345)
T 3fm0_A 144 SVLNSHTQDVKHVVWHPSQELLASASYDDTVKLYREEED 182 (345)
T ss_dssp EEECCCCSCEEEEEECSSSSCEEEEETTSCEEEEEEETT
T ss_pred EEecCcCCCeEEEEECCCCCEEEEEeCCCcEEEEEecCC
Confidence 233 334578899999999999999999999998754
No 27
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=99.93 E-value=9.8e-25 Score=128.43 Aligned_cols=110 Identities=12% Similarity=0.056 Sum_probs=94.2
Q ss_pred CeeEEEcCCCCEEEEEcCCC----cEEEEEcCCCCC----cEEEeeccCCeeEEEEccCCCEEEEeeCCCcEEEeeCCCC
Q 045566 1 VLCSTWKDDGTTVFSGGCDK----QVKMWPLLSGGQ----PVTVAMHDAPIKEVAWIPEMNLLATGSWDKTLKYWDTRQP 72 (112)
Q Consensus 1 v~~~~~~~~~~~l~~~~~~~----~v~~~~~~~~~~----~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~ 72 (112)
|.+++|+|+++.+++++.++ .+++|+...... ...+..|...|++++|+|+++++++|+.|+.|++||+++.
T Consensus 222 v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasgs~D~~V~iwd~~~~ 301 (365)
T 4h5i_A 222 LSKINFIADDTVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGELAVLASNDNSIALVKLKDL 301 (365)
T ss_dssp EEEEEEEETTEEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECTTSCEEEEEETTSCEEEEETTTT
T ss_pred EEEEEEcCCCCEEEEEecCCcceeEEeecccccceecceeeeeecCCCCCeEeEEECCCCCceEEEcCCCEEEEEECCCC
Confidence 46799999999999998876 578888765543 2345678889999999999999999999999999999998
Q ss_pred CceEEe-c---CCCeEEEEeeCCCEEEEEeCCCcEEEEECcC
Q 045566 73 NPVHTQ-Q---LPDRCYALTVRYPLMVVGTADRNLVVFNLQN 110 (112)
Q Consensus 73 ~~~~~~-~---~~~~~~~~~~~~~~~~~~~~d~~v~~~d~~~ 110 (112)
+++..+ . ..+..++|+|++++|++++.|++|+|||+..
T Consensus 302 ~~~~~~~~gH~~~V~~v~fSpdg~~laS~S~D~tvrvw~ip~ 343 (365)
T 4h5i_A 302 SMSKIFKQAHSFAITEVTISPDSTYVASVSAANTIHIIKLPL 343 (365)
T ss_dssp EEEEEETTSSSSCEEEEEECTTSCEEEEEETTSEEEEEECCT
T ss_pred cEEEEecCcccCCEEEEEECCCCCEEEEEeCCCeEEEEEcCC
Confidence 887764 2 3467899999999999999999999999864
No 28
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=99.93 E-value=6e-24 Score=123.99 Aligned_cols=109 Identities=23% Similarity=0.359 Sum_probs=95.4
Q ss_pred CeeEEE-----cC-CCCEEEEEcCCCcEEEEEcCCCC-------CcEEEeeccCCeeEEEEccCCCEEEEeeCCCcEEEe
Q 045566 1 VLCSTW-----KD-DGTTVFSGGCDKQVKMWPLLSGG-------QPVTVAMHDAPIKEVAWIPEMNLLATGSWDKTLKYW 67 (112)
Q Consensus 1 v~~~~~-----~~-~~~~l~~~~~~~~v~~~~~~~~~-------~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w 67 (112)
|.+++| ++ ++++|++|+.|+.|++||+...+ +...+.+|...|.+++|+|++.++++++.|+.|++|
T Consensus 24 V~~~~~~~s~~~~~d~~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~~~~~l~s~s~D~~v~lw 103 (343)
T 2xzm_R 24 VTSIVAGFSQKENEDSPVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQENCFAISSSWDKTLRLW 103 (343)
T ss_dssp EEEEEECCCSSTTCCCCEEEEEETTSCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECSSTTEEEEEETTSEEEEE
T ss_pred hhheeeEEEeecCCCCCEEEEEcCCCEEEEEECCcCCcccccccccchhccCCCceEEEEECCCCCEEEEEcCCCcEEEE
Confidence 467888 66 89999999999999999987543 234567899999999999999999999999999999
Q ss_pred eCCCCCceEEecC---CCeEEEEeeCCCEEEEEeCCCcEEEEECc
Q 045566 68 DTRQPNPVHTQQL---PDRCYALTVRYPLMVVGTADRNLVVFNLQ 109 (112)
Q Consensus 68 ~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~d~~v~~~d~~ 109 (112)
|+++++.+..+.. .+..++|+|+++++++++.|+.|++||++
T Consensus 104 d~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~~~d~~i~~wd~~ 148 (343)
T 2xzm_R 104 DLRTGTTYKRFVGHQSEVYSVAFSPDNRQILSAGAEREIKLWNIL 148 (343)
T ss_dssp ETTSSCEEEEEECCCSCEEEEEECSSTTEEEEEETTSCEEEEESS
T ss_pred ECCCCcEEEEEcCCCCcEEEEEECCCCCEEEEEcCCCEEEEEecc
Confidence 9999887766543 46789999999999999999999999985
No 29
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=99.93 E-value=6e-24 Score=130.34 Aligned_cols=108 Identities=26% Similarity=0.364 Sum_probs=96.2
Q ss_pred CeeEEEcCCCCEEEEEcCCCcEEEEEcCCCCCcEEEeeccCCeeEEEEccCCCEEEEeeCCCcEEEeeCCCCCceEEecC
Q 045566 1 VLCSTWKDDGTTVFSGGCDKQVKMWPLLSGGQPVTVAMHDAPIKEVAWIPEMNLLATGSWDKTLKYWDTRQPNPVHTQQL 80 (112)
Q Consensus 1 v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~ 80 (112)
|++++|+|+|++|++|+.|+.|++||. +++.+.++.+|...|.+++|+|+++++++++.|+.|++||. +++.+..+..
T Consensus 19 V~~~a~spdg~~las~~~d~~v~iWd~-~~~~~~~l~gh~~~V~~l~fspdg~~las~~~d~~i~vWd~-~~~~~~~~~~ 96 (577)
T 2ymu_A 19 VRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTG 96 (577)
T ss_dssp EEEEEECTTSSCEEEEETTSEEEEECT-TSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEET-TSCEEEEECC
T ss_pred EEEEEECCCCCEEEEEeCCCEEEEEEC-CCCEEEEEeCCCCCEEEEEECCCCCEEEEEeCCCEEEEEEC-CCCEEEEEEC
Confidence 679999999999999999999999994 67788889999999999999999999999999999999996 4555655543
Q ss_pred ---CCeEEEEeeCCCEEEEEeCCCcEEEEECcC
Q 045566 81 ---PDRCYALTVRYPLMVVGTADRNLVVFNLQN 110 (112)
Q Consensus 81 ---~~~~~~~~~~~~~~~~~~~d~~v~~~d~~~ 110 (112)
.+..++|+|+++.+++++.|+.+++|+...
T Consensus 97 ~~~~v~~~~~s~d~~~l~~~~~d~~~~~~~~~~ 129 (577)
T 2ymu_A 97 HSSSVRGVAFSPDGQTIASASDDKTVKLWNRNG 129 (577)
T ss_dssp CSSCEEEEEECTTSSEEEEEETTSCEEEEETTC
T ss_pred CCCCEEEEEECCCCCEEEEEcCCCceeeccccc
Confidence 457899999999999999999999999654
No 30
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=99.93 E-value=4.1e-24 Score=123.74 Aligned_cols=110 Identities=16% Similarity=0.303 Sum_probs=95.7
Q ss_pred CeeEEEcCCC-CEEEEEcCCCcEEEEEcCCCC-----CcEEEeeccCCeeEEEEccCCCEEEEeeCCCcEEEeeCCCCCc
Q 045566 1 VLCSTWKDDG-TTVFSGGCDKQVKMWPLLSGG-----QPVTVAMHDAPIKEVAWIPEMNLLATGSWDKTLKYWDTRQPNP 74 (112)
Q Consensus 1 v~~~~~~~~~-~~l~~~~~~~~v~~~~~~~~~-----~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~ 74 (112)
|.+++|+|++ ++|++|+.|+.|++|++.... +...+.+|...|.+++|+|++.++++++.|+.|++||+++++.
T Consensus 20 V~~l~~~~~~~~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~v~~wd~~~~~~ 99 (319)
T 3frx_A 20 VTSLATSAGQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTADGAYALSASWDKTLRLWDVATGET 99 (319)
T ss_dssp EEEEEECSSCTTEEEEEETTSEEEEEEEEEETTEEEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEE
T ss_pred EEEEEccCCCccEEEEecCCccEEEecCCCCCccccccceEEeCCcccEEEEEECCCCCEEEEEeCCCEEEEEECCCCCe
Confidence 5789999954 899999999999999986432 3456788999999999999999999999999999999999887
Q ss_pred eEEecC---CCeEEEEeeCCCEEEEEeCCCcEEEEECcC
Q 045566 75 VHTQQL---PDRCYALTVRYPLMVVGTADRNLVVFNLQN 110 (112)
Q Consensus 75 ~~~~~~---~~~~~~~~~~~~~~~~~~~d~~v~~~d~~~ 110 (112)
+..+.. .+..+.|++++..+++++.|+.|++||++.
T Consensus 100 ~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vwd~~~ 138 (319)
T 3frx_A 100 YQRFVGHKSDVMSVDIDKKASMIISGSRDKTIKVWTIKG 138 (319)
T ss_dssp EEEEECCSSCEEEEEECTTSCEEEEEETTSCEEEEETTS
T ss_pred eEEEccCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCC
Confidence 766543 457888999999999999999999999864
No 31
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.93 E-value=7.7e-24 Score=122.37 Aligned_cols=112 Identities=19% Similarity=0.249 Sum_probs=95.3
Q ss_pred CeeEEEcCCCCEEEEEcCCCcEEEEEcCCCC----CcEEEeeccCCeeEEEEcc--CCCEEEEeeCCCcEEEeeCCCCC-
Q 045566 1 VLCSTWKDDGTTVFSGGCDKQVKMWPLLSGG----QPVTVAMHDAPIKEVAWIP--EMNLLATGSWDKTLKYWDTRQPN- 73 (112)
Q Consensus 1 v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~----~~~~~~~~~~~v~~~~~~~--~~~~~~~~~~~~~i~~w~~~~~~- 73 (112)
|++++|+|++++|++++.|+.|++|++.+.. ....+..|...|.+++|+| ++.++++++.|+.|++||+++.+
T Consensus 14 v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~v~vwd~~~~~~ 93 (351)
T 3f3f_A 14 VHDVVYDFYGRHVATCSSDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYDKTVKLWEEDPDQE 93 (351)
T ss_dssp EEEEEECSSSSEEEEEETTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEECTTSC
T ss_pred eeEEEEcCCCCEEEEeeCCCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcCCCeEEEEecCCCcc
Confidence 5789999999999999999999999998764 3345678999999999999 59999999999999999998763
Q ss_pred --------ceEEec---CCCeEEEEeeC--CCEEEEEeCCCcEEEEECcCCC
Q 045566 74 --------PVHTQQ---LPDRCYALTVR--YPLMVVGTADRNLVVFNLQNPQ 112 (112)
Q Consensus 74 --------~~~~~~---~~~~~~~~~~~--~~~~~~~~~d~~v~~~d~~~~~ 112 (112)
.+..+. ..+..++|+|+ +.++++++.|+.|++||+++++
T Consensus 94 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~ 145 (351)
T 3f3f_A 94 ECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPS 145 (351)
T ss_dssp TTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTT
T ss_pred cccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChH
Confidence 233333 34578899998 9999999999999999998753
No 32
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=99.92 E-value=2.5e-24 Score=124.51 Aligned_cols=111 Identities=19% Similarity=0.349 Sum_probs=94.6
Q ss_pred CeeEEEcCCCCEEEEEcCCCcEEEEEcCCCC--CcEEEeeccCCeeEEEEcc--CCCEEEEeeCCCcEEEeeCCCCC--c
Q 045566 1 VLCSTWKDDGTTVFSGGCDKQVKMWPLLSGG--QPVTVAMHDAPIKEVAWIP--EMNLLATGSWDKTLKYWDTRQPN--P 74 (112)
Q Consensus 1 v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~--~~~~~~~~~~~v~~~~~~~--~~~~~~~~~~~~~i~~w~~~~~~--~ 74 (112)
|.+++|+|++++|++|+.|+.|++||+.+++ ....+.+|...|.+++|++ ++.++++++.|+.|++||+++++ .
T Consensus 16 V~~v~~s~~g~~lasgs~D~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~iWd~~~~~~~~ 95 (316)
T 3bg1_A 16 IHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWREENGTWEK 95 (316)
T ss_dssp EEEEEECGGGCEEEEEETTTEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEETTSCEEEECCSSSCCCE
T ss_pred EEEeeEcCCCCEEEEEeCCCeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECCCEEEEEECCCCcceE
Confidence 5789999999999999999999999998764 3456789999999999975 48899999999999999998763 3
Q ss_pred eEEe---cCCCeEEEEeeC--CCEEEEEeCCCcEEEEECcCC
Q 045566 75 VHTQ---QLPDRCYALTVR--YPLMVVGTADRNLVVFNLQNP 111 (112)
Q Consensus 75 ~~~~---~~~~~~~~~~~~--~~~~~~~~~d~~v~~~d~~~~ 111 (112)
...+ ...+..++|+|+ +.++++++.|+.|++||++.+
T Consensus 96 ~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~ 137 (316)
T 3bg1_A 96 SHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGE 137 (316)
T ss_dssp EEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSS
T ss_pred EEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCC
Confidence 3333 345688999997 789999999999999998753
No 33
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.92 E-value=7.6e-24 Score=123.51 Aligned_cols=111 Identities=14% Similarity=0.094 Sum_probs=94.1
Q ss_pred CeeEEEcC--CCCEEEEEcCCCcEEEEEcCCCCCcEEEe-eccCCeeEEEEccCCCEEEEeeCCCcEEEeeCCCCCce-E
Q 045566 1 VLCSTWKD--DGTTVFSGGCDKQVKMWPLLSGGQPVTVA-MHDAPIKEVAWIPEMNLLATGSWDKTLKYWDTRQPNPV-H 76 (112)
Q Consensus 1 v~~~~~~~--~~~~l~~~~~~~~v~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~-~ 76 (112)
|.+++|+| +++++++++.|+.|++||+++++...... .+...+.+++|+|++.++++|+.|+.|++||+++.+.+ .
T Consensus 128 v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~pdg~~lasg~~dg~i~iwd~~~~~~~~~ 207 (343)
T 3lrv_A 128 IIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQYIVHSAKSDVEYSSGVLHKDSLLLALYSPDGILDVYNLSSPDQASS 207 (343)
T ss_dssp EEEEECCC---CCEEEEEETTCCEEEEESSSSCEEEEECCCSSCCCCEEEECTTSCEEEEECTTSCEEEEESSCTTSCCE
T ss_pred EEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcEEEEEecCCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCCCCcc
Confidence 46899999 99999999999999999999888765553 44567999999999999999999999999999988766 4
Q ss_pred Eec----CCCeEEEEeeCCCEEEEEeCCCcEEEEECcCCC
Q 045566 77 TQQ----LPDRCYALTVRYPLMVVGTADRNLVVFNLQNPQ 112 (112)
Q Consensus 77 ~~~----~~~~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~ 112 (112)
.+. ..+..++|+|++.++++++ ++.|++||+++++
T Consensus 208 ~~~~~h~~~v~~l~fs~~g~~l~s~~-~~~v~iwd~~~~~ 246 (343)
T 3lrv_A 208 RFPVDEEAKIKEVKFADNGYWMVVEC-DQTVVCFDLRKDV 246 (343)
T ss_dssp ECCCCTTSCEEEEEECTTSSEEEEEE-SSBEEEEETTSST
T ss_pred EEeccCCCCEEEEEEeCCCCEEEEEe-CCeEEEEEcCCCC
Confidence 443 3457899999999999999 4599999998763
No 34
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=99.92 E-value=5.1e-24 Score=123.83 Aligned_cols=110 Identities=22% Similarity=0.338 Sum_probs=92.5
Q ss_pred CeeEEEcCCCCEEEEEcCCCcEEEEEcCCC----CCcEEEeeccCCeeEEEEccCCCEEEEeeCCCcEEEeeCCCC--Cc
Q 045566 1 VLCSTWKDDGTTVFSGGCDKQVKMWPLLSG----GQPVTVAMHDAPIKEVAWIPEMNLLATGSWDKTLKYWDTRQP--NP 74 (112)
Q Consensus 1 v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~----~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~--~~ 74 (112)
|.+++|+|++++|++|+.|+.|++||+... +.+..+..|...|.+++|+|++.++++++.|+.|++||.++. ++
T Consensus 110 V~~v~~sp~g~~las~s~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~iW~~~~~~~~~ 189 (330)
T 2hes_X 110 VKGVAWSNDGYYLATCSRDKSVWIWETDESGEEYECISVLQEHSQDVKHVIWHPSEALLASSSYDDTVRIWKDYDDDWEC 189 (330)
T ss_dssp EEEEEECTTSCEEEEEETTSCEEEEECCTTCCCCEEEEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEE
T ss_pred EEEEEECCCCCEEEEEeCCCEEEEEeccCCCCCeEEEEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCCeeE
Confidence 468999999999999999999999998533 234567789999999999999999999999999999998765 34
Q ss_pred eEEec---CCCeEEEEeeC--CCEEEEEeCCCcEEEEECcC
Q 045566 75 VHTQQ---LPDRCYALTVR--YPLMVVGTADRNLVVFNLQN 110 (112)
Q Consensus 75 ~~~~~---~~~~~~~~~~~--~~~~~~~~~d~~v~~~d~~~ 110 (112)
+..+. ..+..+.|+|+ +..+++++.|+.|++||++.
T Consensus 190 ~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~D~~v~iw~~~~ 230 (330)
T 2hes_X 190 VAVLNGHEGTVWSSDFDKTEGVFRLCSGSDDSTVRVWKYMG 230 (330)
T ss_dssp EEEECCCSSCEEEEEECCSSSSCEEEEEETTSCEEEEEEEE
T ss_pred EEEccCCCCcEEEEEecCCCCeeEEEEEeCCCeEEEEEecC
Confidence 44443 34567889998 67899999999999999864
No 35
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=99.92 E-value=1.2e-23 Score=124.67 Aligned_cols=110 Identities=22% Similarity=0.379 Sum_probs=94.0
Q ss_pred CeeEEEcCCCCEEEEEcCCCcEEEEEcCCCCCcEEEeecc------------------CCeeEEEEccCCCEEEEeeCCC
Q 045566 1 VLCSTWKDDGTTVFSGGCDKQVKMWPLLSGGQPVTVAMHD------------------APIKEVAWIPEMNLLATGSWDK 62 (112)
Q Consensus 1 v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~------------------~~v~~~~~~~~~~~~~~~~~~~ 62 (112)
|.+++|+|+|++|++++ ++.+++|++.+++....+..+. ..|.+++|+|+++++++++.|+
T Consensus 67 V~~v~fspdg~~la~g~-~~~v~i~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~l~s~~~d~ 145 (393)
T 1erj_A 67 VCCVKFSNDGEYLATGC-NKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGKFLATGAEDR 145 (393)
T ss_dssp CCEEEECTTSSEEEEEC-BSCEEEEETTTCCEEEEECC-----------------CCCCBEEEEEECTTSSEEEEEETTS
T ss_pred EEEEEECCCCCEEEEEc-CCcEEEEEecCCCEEEEecCccccccccccccccccCCCceeEEEEEECCCCCEEEEEcCCC
Confidence 57899999999999987 5789999998887766664332 2489999999999999999999
Q ss_pred cEEEeeCCCCCceEEecC---CCeEEEEeeCCCEEEEEeCCCcEEEEECcCC
Q 045566 63 TLKYWDTRQPNPVHTQQL---PDRCYALTVRYPLMVVGTADRNLVVFNLQNP 111 (112)
Q Consensus 63 ~i~~w~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~d~~v~~~d~~~~ 111 (112)
.|++||+.+.+.+..+.. .+..++|+|++..+++++.|+.|++||++++
T Consensus 146 ~i~iwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~ 197 (393)
T 1erj_A 146 LIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTG 197 (393)
T ss_dssp CEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTT
T ss_pred eEEEEECCCCcEEEEEccCCCCEEEEEEcCCCCEEEEecCCCcEEEEECCCC
Confidence 999999998877666543 4578899999999999999999999999875
No 36
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=99.92 E-value=7.4e-24 Score=126.88 Aligned_cols=110 Identities=15% Similarity=0.199 Sum_probs=91.8
Q ss_pred CeeEEEcC-CCCEEEEEcCCCcEEEEEcCCCCCcEE--EeeccCCeeEEEEcc-CCCEEEEeeCCCcEEEeeCCCCCceE
Q 045566 1 VLCSTWKD-DGTTVFSGGCDKQVKMWPLLSGGQPVT--VAMHDAPIKEVAWIP-EMNLLATGSWDKTLKYWDTRQPNPVH 76 (112)
Q Consensus 1 v~~~~~~~-~~~~l~~~~~~~~v~~~~~~~~~~~~~--~~~~~~~v~~~~~~~-~~~~~~~~~~~~~i~~w~~~~~~~~~ 76 (112)
|+|++|+| ++++|++|+.||.|++||+.+++.... +.+|.+.|++++|+| ++.++++++.|+.|++||+++.....
T Consensus 122 V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~iwd~~~~~~~~ 201 (435)
T 4e54_B 122 ATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSMEGTTRLQDFKGNILRV 201 (435)
T ss_dssp EEEEEECSSCTTCEEEEETTSCEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEEECSSSCEEEEETTSCEEEE
T ss_pred EEEEEEeCCCCCEEEEEeCCCEEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEeeccCCceeE
Confidence 57999999 567999999999999999987765544 357999999999998 78999999999999999997654322
Q ss_pred Eec-----CCCeEEEEeeCCCEEEEEeCCCcEEEEECcC
Q 045566 77 TQQ-----LPDRCYALTVRYPLMVVGTADRNLVVFNLQN 110 (112)
Q Consensus 77 ~~~-----~~~~~~~~~~~~~~~~~~~~d~~v~~~d~~~ 110 (112)
... .....+.|++++.++++|+.|+.|++||++.
T Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~~ 240 (435)
T 4e54_B 202 FASSDTINIWFCSLDVSASSRMVVTGDNVGNVILLNMDG 240 (435)
T ss_dssp EECCSSCSCCCCCEEEETTTTEEEEECSSSBEEEEESSS
T ss_pred EeccCCCCccEEEEEECCCCCEEEEEeCCCcEeeeccCc
Confidence 221 1245788999999999999999999999864
No 37
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.92 E-value=8.9e-24 Score=123.22 Aligned_cols=110 Identities=15% Similarity=0.150 Sum_probs=94.0
Q ss_pred CeeEEEcCCCCEEEEEcCCCcEEEEEcCCCCCc-EEEee-ccCCeeEEEEccCCCEEEEeeCCCcEEEeeCCCCCceEEe
Q 045566 1 VLCSTWKDDGTTVFSGGCDKQVKMWPLLSGGQP-VTVAM-HDAPIKEVAWIPEMNLLATGSWDKTLKYWDTRQPNPVHTQ 78 (112)
Q Consensus 1 v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~-~~~~~-~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~ 78 (112)
|.+++|+|++.++++|+.|+.|++||+++++.. ..+.. |...|.+++|+|++.++++++.+ .|++||+++.+.+..+
T Consensus 173 i~~~~~~pdg~~lasg~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~l~fs~~g~~l~s~~~~-~v~iwd~~~~~~~~~~ 251 (343)
T 3lrv_A 173 YSSGVLHKDSLLLALYSPDGILDVYNLSSPDQASSRFPVDEEAKIKEVKFADNGYWMVVECDQ-TVVCFDLRKDVGTLAY 251 (343)
T ss_dssp CCEEEECTTSCEEEEECTTSCEEEEESSCTTSCCEECCCCTTSCEEEEEECTTSSEEEEEESS-BEEEEETTSSTTCBSS
T ss_pred eEEEEECCCCCEEEEEcCCCEEEEEECCCCCCCccEEeccCCCCEEEEEEeCCCCEEEEEeCC-eEEEEEcCCCCcceee
Confidence 568999999999999999999999999998887 67777 99999999999999999999954 9999999988765433
Q ss_pred c------CCC--eEEEEeeCCCEEEEEeC-CCcEEEEECcCC
Q 045566 79 Q------LPD--RCYALTVRYPLMVVGTA-DRNLVVFNLQNP 111 (112)
Q Consensus 79 ~------~~~--~~~~~~~~~~~~~~~~~-d~~v~~~d~~~~ 111 (112)
. .+. ..++|+|+++++++++. |+.+++|++.+.
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~g~~l~~~s~~d~~i~v~~~~~~ 293 (343)
T 3lrv_A 252 PTYTIPEFKTGTVTYDIDDSGKNMIAYSNESNSLTIYKFDKK 293 (343)
T ss_dssp CCCBC-----CCEEEEECTTSSEEEEEETTTTEEEEEEECTT
T ss_pred cccccccccccceEEEECCCCCEEEEecCCCCcEEEEEEccc
Confidence 2 122 35899999999999998 999999998543
No 38
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.92 E-value=9.6e-24 Score=123.01 Aligned_cols=112 Identities=21% Similarity=0.468 Sum_probs=97.1
Q ss_pred CeeEEEcCC---CCEEEEEcCCCcEEEEEcCC-CCCc-EEEeeccCCeeEEEEccCCCEEEEeeCCCcEEEeeCCCCCce
Q 045566 1 VLCSTWKDD---GTTVFSGGCDKQVKMWPLLS-GGQP-VTVAMHDAPIKEVAWIPEMNLLATGSWDKTLKYWDTRQPNPV 75 (112)
Q Consensus 1 v~~~~~~~~---~~~l~~~~~~~~v~~~~~~~-~~~~-~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~ 75 (112)
|.+++|+|+ |++|++|+.|+.|++|++.+ +... ..+..|...|.+++|+|++.++++++.|+.|++||+++.+.+
T Consensus 42 v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~ 121 (368)
T 3mmy_A 42 IGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFTASCDKTAKMWDLSSNQAI 121 (368)
T ss_dssp EEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSCEEEEEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEE
T ss_pred eEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCceeEEEeccccCCEEEEEECcCCCEEEEEcCCCcEEEEEcCCCCce
Confidence 579999998 69999999999999999987 4444 567789999999999999999999999999999999988765
Q ss_pred EEe--cCCCeEEEE--eeCCCEEEEEeCCCcEEEEECcCCC
Q 045566 76 HTQ--QLPDRCYAL--TVRYPLMVVGTADRNLVVFNLQNPQ 112 (112)
Q Consensus 76 ~~~--~~~~~~~~~--~~~~~~~~~~~~d~~v~~~d~~~~~ 112 (112)
... ...+..+.| ++++.++++++.|+.|++||+++++
T Consensus 122 ~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~ 162 (368)
T 3mmy_A 122 QIAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSN 162 (368)
T ss_dssp EEEECSSCEEEEEEEECSSCEEEEEEETTSEEEEECSSCSS
T ss_pred eeccccCceEEEEEEeCCCCCEEEEccCCCcEEEEECCCCc
Confidence 443 345678888 7888899999999999999998763
No 39
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=99.92 E-value=8.1e-24 Score=122.50 Aligned_cols=110 Identities=20% Similarity=0.271 Sum_probs=94.9
Q ss_pred CeeEEEcCCCCEEEEEcCCCcEEEEEcCCCCCcEEEeeccCCeeEEEEccCCCEEEEeeCCCcEEEeeCCCCCceEEecC
Q 045566 1 VLCSTWKDDGTTVFSGGCDKQVKMWPLLSGGQPVTVAMHDAPIKEVAWIPEMNLLATGSWDKTLKYWDTRQPNPVHTQQL 80 (112)
Q Consensus 1 v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~ 80 (112)
|.+++|+|+++++++|+.|+.|++||+.+++....+.+|...|.+++|+|++.++++++.|+.|++||++. +.+..+..
T Consensus 68 v~~~~~s~dg~~l~s~s~D~~v~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vwd~~~-~~~~~~~~ 146 (319)
T 3frx_A 68 VQDCTLTADGAYALSASWDKTLRLWDVATGETYQRFVGHKSDVMSVDIDKKASMIISGSRDKTIKVWTIKG-QCLATLLG 146 (319)
T ss_dssp EEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSCEEEEEETTSCEEEEETTS-CEEEEECC
T ss_pred EEEEEECCCCCEEEEEeCCCEEEEEECCCCCeeEEEccCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCC-CeEEEEec
Confidence 46789999999999999999999999999998889999999999999999999999999999999999974 34444433
Q ss_pred ---CCeEEEEeeC------CCEEEEEeCCCcEEEEECcCC
Q 045566 81 ---PDRCYALTVR------YPLMVVGTADRNLVVFNLQNP 111 (112)
Q Consensus 81 ---~~~~~~~~~~------~~~~~~~~~d~~v~~~d~~~~ 111 (112)
.+..+.+.|. +..+++++.|+.|++||++++
T Consensus 147 h~~~v~~~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~ 186 (319)
T 3frx_A 147 HNDWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQF 186 (319)
T ss_dssp CSSCEEEEEECCC------CCEEEEEETTSCEEEEETTTT
T ss_pred cCCcEEEEEEccCCCCCCCccEEEEEeCCCEEEEEECCcc
Confidence 3456777774 448999999999999999864
No 40
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=99.92 E-value=6e-24 Score=124.73 Aligned_cols=112 Identities=25% Similarity=0.380 Sum_probs=97.1
Q ss_pred CeeEEEcCCCCEEEEEcCCCcEEEEEcCCCCCcEEEeeccCCeeEEEEccCCC-EEEEeeCCCcEEEeeCCCCCceEEec
Q 045566 1 VLCSTWKDDGTTVFSGGCDKQVKMWPLLSGGQPVTVAMHDAPIKEVAWIPEMN-LLATGSWDKTLKYWDTRQPNPVHTQQ 79 (112)
Q Consensus 1 v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~~~~~~~~~~i~~w~~~~~~~~~~~~ 79 (112)
|.+++|+|++++|++|+.|+.|++||+.+++....+..|...|.+++|++++. .+++++.|+.|++||+++++......
T Consensus 142 V~~v~~spdg~~l~sgs~dg~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~~~~~~ 221 (357)
T 4g56_B 142 VKTLSVFSDGTQAVSGGKDFSVKVWDLSQKAVLKSYNAHSSEVNCVAACPGKDTIFLSCGEDGRILLWDTRKPKPATRID 221 (357)
T ss_dssp EEEEEECSSSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTCSSCEEEEETTSCEEECCTTSSSCBCBCC
T ss_pred EEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEccCCCceeeeeccCCceEEEECCCCceeeeee
Confidence 57899999999999999999999999999988889999999999999999764 78899999999999999887665443
Q ss_pred C-----CCeEEEEeeC-CCEEEEEeCCCcEEEEECcCCC
Q 045566 80 L-----PDRCYALTVR-YPLMVVGTADRNLVVFNLQNPQ 112 (112)
Q Consensus 80 ~-----~~~~~~~~~~-~~~~~~~~~d~~v~~~d~~~~~ 112 (112)
. ....++|+|+ +.++++++.|+.|++||+++++
T Consensus 222 ~~~~~~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~~~ 260 (357)
T 4g56_B 222 FCASDTIPTSVTWHPEKDDTFACGDETGNVSLVNIKNPD 260 (357)
T ss_dssp CTTCCSCEEEEEECTTSTTEEEEEESSSCEEEEESSCGG
T ss_pred eccccccccchhhhhcccceEEEeecccceeEEECCCCc
Confidence 2 3467888887 4678899999999999998753
No 41
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=99.92 E-value=5.4e-24 Score=124.10 Aligned_cols=111 Identities=15% Similarity=0.204 Sum_probs=99.8
Q ss_pred CeeEEEcCC----CCEEEEEcCCCcEEEEEcCCCCCcEEEeeccCCeeEEEEcc-CCCEEEEeeCCCcEEEeeCCCCCce
Q 045566 1 VLCSTWKDD----GTTVFSGGCDKQVKMWPLLSGGQPVTVAMHDAPIKEVAWIP-EMNLLATGSWDKTLKYWDTRQPNPV 75 (112)
Q Consensus 1 v~~~~~~~~----~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~~~~~~~~~i~~w~~~~~~~~ 75 (112)
|.+++|+|+ ++++++++.|+.|++||+.+++....+..|...|.+++|+| ++.++++++.|+.|++||+++.+.+
T Consensus 72 v~~~~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~ 151 (366)
T 3k26_A 72 FYTCAWTYDSNTSHPLLAVAGSRGIIRIINPITMQCIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLV 151 (366)
T ss_dssp EEEEEEEECTTTCCEEEEEEETTCEEEEECTTTCCEEEEEESCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTTTEEE
T ss_pred EEEEEeccCCCCCCCEEEEecCCCEEEEEEchhceEeeeecCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecCeEE
Confidence 468899998 67999999999999999999988888889999999999999 9999999999999999999988777
Q ss_pred EEe------cCCCeEEEEeeCCCEEEEEeCCCcEEEEECcCC
Q 045566 76 HTQ------QLPDRCYALTVRYPLMVVGTADRNLVVFNLQNP 111 (112)
Q Consensus 76 ~~~------~~~~~~~~~~~~~~~~~~~~~d~~v~~~d~~~~ 111 (112)
..+ ...+..++|+|++..+++++.|+.|++||++++
T Consensus 152 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~ 193 (366)
T 3k26_A 152 AIFGGVEGHRDEVLSADYDLLGEKIMSCGMDHSLKLWRINSK 193 (366)
T ss_dssp EEECSTTSCSSCEEEEEECTTSSEEEEEETTSCEEEEESCSH
T ss_pred EEecccccccCceeEEEECCCCCEEEEecCCCCEEEEECCCC
Confidence 665 234578899999999999999999999999864
No 42
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=99.92 E-value=9.1e-24 Score=124.59 Aligned_cols=112 Identities=12% Similarity=0.206 Sum_probs=100.0
Q ss_pred CeeEEEcCCCCEEEEEcCC---CcEEEEEcCCCCCcEEEee-------------ccCCeeEEEEccCCCEEEEeeCCCcE
Q 045566 1 VLCSTWKDDGTTVFSGGCD---KQVKMWPLLSGGQPVTVAM-------------HDAPIKEVAWIPEMNLLATGSWDKTL 64 (112)
Q Consensus 1 v~~~~~~~~~~~l~~~~~~---~~v~~~~~~~~~~~~~~~~-------------~~~~v~~~~~~~~~~~~~~~~~~~~i 64 (112)
|.+++|+|++++|++++.| +.|++||+.+++.+..+.. |...|.+++|+|++.++++++.|+.|
T Consensus 236 i~~i~~~~~~~~l~~~~~d~~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i 315 (397)
T 1sq9_A 236 IRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKL 315 (397)
T ss_dssp EEEEEECSSTTEEEEEEEETTEEEEEEEETTTCCEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEETTSEE
T ss_pred cceEEECCCCCEEEEEecCCCCceEEEEECCCCcccceeccCcccccccccccccCCcEEEEEECCCCCEEEEEeCCCeE
Confidence 4689999999999999999 9999999999988888887 99999999999999999999999999
Q ss_pred EEeeCCCCCceEEec------------------------CCCeEEEEeeCC----------CEEEEEeCCCcEEEEECcC
Q 045566 65 KYWDTRQPNPVHTQQ------------------------LPDRCYALTVRY----------PLMVVGTADRNLVVFNLQN 110 (112)
Q Consensus 65 ~~w~~~~~~~~~~~~------------------------~~~~~~~~~~~~----------~~~~~~~~d~~v~~~d~~~ 110 (112)
++||+++.+.+..+. ..+..++|+|++ +++++++.|+.|++||+++
T Consensus 316 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~l~s~~~dg~i~iw~~~~ 395 (397)
T 1sq9_A 316 RFWDVKTKERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKGWRSGMGADLNESLCCVCLDRSIRWFREAG 395 (397)
T ss_dssp EEEETTTTEEEEEEECCGGGCSSGGGCCCBCTTSCBCSSCCEEEEEEECTTTSBSTTCTTSCEEEEEETTTEEEEEEEEC
T ss_pred EEEEcCCCceeEEEecccCcccchhhhhccccccccccCCceeEEEeccccccccccccccceEEEecCCCcEEEEEcCC
Confidence 999999888776665 235688999998 7999999999999999998
Q ss_pred CC
Q 045566 111 PQ 112 (112)
Q Consensus 111 ~~ 112 (112)
++
T Consensus 396 g~ 397 (397)
T 1sq9_A 396 GK 397 (397)
T ss_dssp --
T ss_pred CC
Confidence 74
No 43
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=99.92 E-value=9.3e-24 Score=129.50 Aligned_cols=105 Identities=26% Similarity=0.389 Sum_probs=93.7
Q ss_pred CeeEEEcCCCCEEEEEcCCCcEEEEEcCCCCCcEEEeeccCCeeEEEEccCCCEEEEeeCCCcEEEeeCCCCCceEEec-
Q 045566 1 VLCSTWKDDGTTVFSGGCDKQVKMWPLLSGGQPVTVAMHDAPIKEVAWIPEMNLLATGSWDKTLKYWDTRQPNPVHTQQ- 79 (112)
Q Consensus 1 v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~- 79 (112)
|.+++|+|++++|++++.|+.|++|+. +++.+..+.+|...|++++|+|+++++++++.|+.|++||. +++.+..+.
T Consensus 470 v~~~~~spd~~~las~~~d~~i~iw~~-~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~dg~v~lwd~-~~~~~~~~~~ 547 (577)
T 2ymu_A 470 VRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTG 547 (577)
T ss_dssp EEEEEECTTSCEEEEEETTSEEEEEET-TSCEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECT-TSCEEEEEEC
T ss_pred EEEEEEcCCCCEEEEEeCCCEEEEEcC-CCCEEEEEeCCCCCEEEEEEcCCCCEEEEEECcCEEEEEeC-CCCEEEEEcC
Confidence 468999999999999999999999994 67778888999999999999999999999999999999996 456555554
Q ss_pred --CCCeEEEEeeCCCEEEEEeCCCcEEEEE
Q 045566 80 --LPDRCYALTVRYPLMVVGTADRNLVVFN 107 (112)
Q Consensus 80 --~~~~~~~~~~~~~~~~~~~~d~~v~~~d 107 (112)
..+..++|+|++++|++++.|+.|++||
T Consensus 548 h~~~v~~~~fs~dg~~l~s~~~D~~i~~Wd 577 (577)
T 2ymu_A 548 HSSSVWGVAFSPDGQTIASASSDKTVKLWN 577 (577)
T ss_dssp CSSCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred CCCCEEEEEEcCCCCEEEEEeCCCEEEEeC
Confidence 3567899999999999999999999997
No 44
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=99.92 E-value=2.4e-23 Score=121.36 Aligned_cols=111 Identities=18% Similarity=0.261 Sum_probs=101.5
Q ss_pred CeeEEEcCCCCEEEEEcCCCcEEEEEcCCCCCcEEEeeccCCeeEEEEccCCCEEEEeeCCCcEEEeeCCCCCceEEec-
Q 045566 1 VLCSTWKDDGTTVFSGGCDKQVKMWPLLSGGQPVTVAMHDAPIKEVAWIPEMNLLATGSWDKTLKYWDTRQPNPVHTQQ- 79 (112)
Q Consensus 1 v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~- 79 (112)
|.+++|+|++++|++++.|+.|++||+.+++....+..|...|.+++|+|+++++++++.|+.|++||+.+.+.+..+.
T Consensus 35 v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~ 114 (369)
T 3zwl_B 35 LTQVKYNKEGDLLFSCSKDSSASVWYSLNGERLGTLDGHTGTIWSIDVDCFTKYCVTGSADYSIKLWDVSNGQCVATWKS 114 (369)
T ss_dssp EEEEEECTTSCEEEEEESSSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTCCEEEEEEC
T ss_pred EEEEEEcCCCCEEEEEeCCCEEEEEeCCCchhhhhhhhcCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEeec
Confidence 5789999999999999999999999999999988999999999999999999999999999999999999988776654
Q ss_pred -CCCeEEEEeeCCCEEEEEeCC-----CcEEEEECcCC
Q 045566 80 -LPDRCYALTVRYPLMVVGTAD-----RNLVVFNLQNP 111 (112)
Q Consensus 80 -~~~~~~~~~~~~~~~~~~~~d-----~~v~~~d~~~~ 111 (112)
..+..+.|+|++..+++++.+ +.+.+||++.+
T Consensus 115 ~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~ 152 (369)
T 3zwl_B 115 PVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERD 152 (369)
T ss_dssp SSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEEC
T ss_pred CCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCC
Confidence 345788999999999999999 99999998754
No 45
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.92 E-value=7.8e-24 Score=124.16 Aligned_cols=111 Identities=15% Similarity=0.115 Sum_probs=94.4
Q ss_pred CeeEEEcCCCCEEEEEcCCCc-EEEEEcCCCCCcEEEe-e-ccCCeeEEEEccCCCEEEEeeCCCcEEEeeCCCCCce--
Q 045566 1 VLCSTWKDDGTTVFSGGCDKQ-VKMWPLLSGGQPVTVA-M-HDAPIKEVAWIPEMNLLATGSWDKTLKYWDTRQPNPV-- 75 (112)
Q Consensus 1 v~~~~~~~~~~~l~~~~~~~~-v~~~~~~~~~~~~~~~-~-~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~-- 75 (112)
|.+++|+|++++|++|+.|+. |++||+.+++.+..+. + |...|.+++|+|+++++++++.|+.|++||++.....
T Consensus 198 v~~~~~s~~g~~l~s~s~d~~~v~iwd~~~~~~~~~~~~g~h~~~v~~~~~s~~~~~l~s~s~d~~v~iw~~~~~~~~~~ 277 (355)
T 3vu4_A 198 IKMVRLNRKSDMVATCSQDGTIIRVFKTEDGVLVREFRRGLDRADVVDMKWSTDGSKLAVVSDKWTLHVFEIFNDQDNKR 277 (355)
T ss_dssp EEEEEECTTSSEEEEEETTCSEEEEEETTTCCEEEEEECTTCCSCEEEEEECTTSCEEEEEETTCEEEEEESSCCSCCCS
T ss_pred eEEEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEcCCCCCcEEEEEECCCCCEEEEEECCCEEEEEEccCCCCccc
Confidence 578999999999999999998 9999999999988887 4 8999999999999999999999999999999765311
Q ss_pred EEe--------------------c----CCCeEEEEeeCCCEEEEEeCCCcEEEEECcCC
Q 045566 76 HTQ--------------------Q----LPDRCYALTVRYPLMVVGTADRNLVVFNLQNP 111 (112)
Q Consensus 76 ~~~--------------------~----~~~~~~~~~~~~~~~~~~~~d~~v~~~d~~~~ 111 (112)
..+ . .+...++|++++..+++++.||.+++|++..+
T Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~d~~~l~~~~~dg~~~~~~~~~~ 337 (355)
T 3vu4_A 278 HALKGWINMKYFQSEWSLCNFKLSVDKHVRGCKIAWISESSLVVVWPHTRMIETFKVVFD 337 (355)
T ss_dssp EETTTTEECCCCCCSSCSEEEECCCCTTCCCCEEEESSSSEEEEEETTTTEEEEEEEEEE
T ss_pred ccccceeeccccccccceeEEEeccCCCCCceEEEEeCCCCEEEEEeCCCeEEEEEEEcC
Confidence 110 0 01256889999999999999999999997653
No 46
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=99.92 E-value=2.2e-23 Score=123.75 Aligned_cols=109 Identities=17% Similarity=0.129 Sum_probs=97.4
Q ss_pred eEEEcCCCCEEEEEcCCCcEEEEEcCCCCCcEEEeeccCCeeEEEEccCCCEEEEeeCCCcEEEeeCCCCCceEEec---
Q 045566 3 CSTWKDDGTTVFSGGCDKQVKMWPLLSGGQPVTVAMHDAPIKEVAWIPEMNLLATGSWDKTLKYWDTRQPNPVHTQQ--- 79 (112)
Q Consensus 3 ~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~--- 79 (112)
...|+|++++|++++.|+.|++||+.+++....+..|...|.+++|+|++.++++++.|+.|++||+++.+.+..+.
T Consensus 102 ~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~h~ 181 (420)
T 3vl1_A 102 VDTAKLQMRRFILGTTEGDIKVLDSNFNLQREIDQAHVSEITKLKFFPSGEALISSSQDMQLKIWSVKDGSNPRTLIGHR 181 (420)
T ss_dssp EEEECSSSCEEEEEETTSCEEEECTTSCEEEEETTSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCCCEEEECCS
T ss_pred EEEEecCCCEEEEEECCCCEEEEeCCCcceeeecccccCccEEEEECCCCCEEEEEeCCCeEEEEeCCCCcCceEEcCCC
Confidence 34688999999999999999999998777766667899999999999999999999999999999999887766554
Q ss_pred CCCeEEEEeeCCCEEEEEeCCCcEEEEECcCC
Q 045566 80 LPDRCYALTVRYPLMVVGTADRNLVVFNLQNP 111 (112)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~d~~v~~~d~~~~ 111 (112)
..+..++|+|++..+++++.|+.|++||++++
T Consensus 182 ~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~ 213 (420)
T 3vl1_A 182 ATVTDIAIIDRGRNVLSASLDGTIRLWECGTG 213 (420)
T ss_dssp SCEEEEEEETTTTEEEEEETTSCEEEEETTTT
T ss_pred CcEEEEEEcCCCCEEEEEcCCCcEEEeECCCC
Confidence 35578999999999999999999999999875
No 47
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=99.92 E-value=3.8e-23 Score=120.61 Aligned_cols=109 Identities=17% Similarity=0.272 Sum_probs=93.4
Q ss_pred CeeEEEcCCCCEEEEEcCCCcEEEEEcCCCCCcEEEeeccCCeeEEEEccCCCEEEEeeCCCcEEEeeCCCCCceEE---
Q 045566 1 VLCSTWKDDGTTVFSGGCDKQVKMWPLLSGGQPVTVAMHDAPIKEVAWIPEMNLLATGSWDKTLKYWDTRQPNPVHT--- 77 (112)
Q Consensus 1 v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~--- 77 (112)
|.+++|+|++.++++++.|+.|++||+++++....+.+|...|.+++|+|++.++++++.|+.|++||+........
T Consensus 79 V~~~~~~~~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~ 158 (343)
T 2xzm_R 79 VSDLALSQENCFAISSSWDKTLRLWDLRTGTTYKRFVGHQSEVYSVAFSPDNRQILSAGAEREIKLWNILGECKFSSAEK 158 (343)
T ss_dssp EEEEEECSSTTEEEEEETTSEEEEEETTSSCEEEEEECCCSCEEEEEECSSTTEEEEEETTSCEEEEESSSCEEEECCTT
T ss_pred eEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEEEcCCCCcEEEEEECCCCCEEEEEcCCCEEEEEeccCCceeeeecc
Confidence 46899999999999999999999999999998888999999999999999999999999999999999974322211
Q ss_pred --ecCCCeEEEEeeCC----------CEEEEEeCCCcEEEEECc
Q 045566 78 --QQLPDRCYALTVRY----------PLMVVGTADRNLVVFNLQ 109 (112)
Q Consensus 78 --~~~~~~~~~~~~~~----------~~~~~~~~d~~v~~~d~~ 109 (112)
+...+..+.|+|++ .++++++.|+.|++||.+
T Consensus 159 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~ 202 (343)
T 2xzm_R 159 ENHSDWVSCVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWNTN 202 (343)
T ss_dssp TSCSSCEEEEEECCCCCSCSCCCSSCCEEEEEETTSEEEEEETT
T ss_pred cCCCceeeeeeeccccccccccCCCCCEEEEEcCCCEEEEEcCC
Confidence 12234678888876 789999999999999953
No 48
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.92 E-value=4.8e-23 Score=119.73 Aligned_cols=108 Identities=14% Similarity=0.138 Sum_probs=83.9
Q ss_pred eeEEEcC---CCCEEEEEcCCCcEEEEEcCCCCCcEEEeecc---CCeeEEEEccCCC----------------------
Q 045566 2 LCSTWKD---DGTTVFSGGCDKQVKMWPLLSGGQPVTVAMHD---APIKEVAWIPEMN---------------------- 53 (112)
Q Consensus 2 ~~~~~~~---~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~---~~v~~~~~~~~~~---------------------- 53 (112)
..++|+| ++..|++++.|++|++||+.+++.+.++..|. ..+.+++|+|++.
T Consensus 182 ~~l~fs~~~g~~~~LaSgS~D~TIkIWDl~TGk~l~tL~g~~~~v~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~D~t 261 (356)
T 2w18_A 182 TILTFAEVQGMQEALLGTTIMNNIVIWNLKTGQLLKKMHIDDSYQASVCHKAYSEMGLLFIVLSHPCAKESESLRSPVFQ 261 (356)
T ss_dssp CEEEEEEEETSTTEEEEEETTSEEEEEETTTCCEEEEEECCC---CCCEEEEEEETTEEEEEEC------------CCEE
T ss_pred eeEEeeccCCCCceEEEecCCCcEEEEECCCCcEEEEEcCCCcceeeeEEEEECCCCCEEEEeccCCCcceeeccCCCcE
Confidence 4567777 66889999999999999999999888886432 2344444544433
Q ss_pred -----------------------------------EEEEeeCCCcEEEeeCCCCCceEEecCC---C-eEEEEeeCCCEE
Q 045566 54 -----------------------------------LLATGSWDKTLKYWDTRQPNPVHTQQLP---D-RCYALTVRYPLM 94 (112)
Q Consensus 54 -----------------------------------~~~~~~~~~~i~~w~~~~~~~~~~~~~~---~-~~~~~~~~~~~~ 94 (112)
.+++++.|++|++||+.+++.+..+..+ . ..++|+|++++|
T Consensus 262 IklWd~~tgk~l~v~~~~~p~Gh~~~~lsg~~sg~~lASgS~DgTIkIWDl~tGk~l~tL~gH~~~vvs~vafSPDG~~L 341 (356)
T 2w18_A 262 LIVINPKTTLSVGVMLYCLPPGQAGRFLEGDVKDHCAAAILTSGTIAIWDLLLGQCTALLPPVSDQHWSFVKWSGTDSHL 341 (356)
T ss_dssp EEEEETTTTEEEEEEEECCCTTCCCCEEEEEEETTEEEEEETTSCEEEEETTTCSEEEEECCC--CCCCEEEECSSSSEE
T ss_pred EEEEECCCCEEEEEEEeeccCCCcceeEccccCCCEEEEEcCCCcEEEEECCCCcEEEEecCCCCCeEEEEEECCCCCEE
Confidence 3466678999999999999988887543 2 357899999999
Q ss_pred EEEeCCCcEEEEECc
Q 045566 95 VVGTADRNLVVFNLQ 109 (112)
Q Consensus 95 ~~~~~d~~v~~~d~~ 109 (112)
++|+.|++|++||+.
T Consensus 342 aSGS~D~TIklWd~~ 356 (356)
T 2w18_A 342 LAGQKDGNIFVYHYS 356 (356)
T ss_dssp EEECTTSCEEEEEEC
T ss_pred EEEECCCcEEEecCC
Confidence 999999999999963
No 49
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=99.91 E-value=4e-25 Score=129.77 Aligned_cols=111 Identities=16% Similarity=0.218 Sum_probs=90.8
Q ss_pred CeeEEEcCCCCEEEEEcCCCcEEEEEcCCC--CCcEEEeeccCCeeEEEEccCCCEEEEeeCCCcEEEeeCCCCC---ce
Q 045566 1 VLCSTWKDDGTTVFSGGCDKQVKMWPLLSG--GQPVTVAMHDAPIKEVAWIPEMNLLATGSWDKTLKYWDTRQPN---PV 75 (112)
Q Consensus 1 v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~--~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~---~~ 75 (112)
|.+++|+|++++|++++.|+.|++|++.++ +....+..|...|.+++|+|+++++++++.|+.|++||+.+.+ ..
T Consensus 14 v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~v~vwd~~~~~~~~~~ 93 (377)
T 3dwl_C 14 SYEHAFNSQRTEFVTTTATNQVELYEQDGNGWKHARTFSDHDKIVTCVDWAPKSNRIVTCSQDRNAYVYEKRPDGTWKQT 93 (377)
T ss_dssp CSCCEECSSSSEEECCCSSSCBCEEEEETTEEEECCCBCCCSSCEEEEEECTTTCCEEEEETTSSEEEC------CCCCE
T ss_pred EEEEEECCCCCEEEEecCCCEEEEEEccCCceEEEEEEecCCceEEEEEEeCCCCEEEEEeCCCeEEEEEcCCCCceeee
Confidence 578999999999999999999999999877 5666778899999999999999999999999999999998866 33
Q ss_pred EEe---cCCCeEEEEeeCCCEEEEEeCCCcEEEEECcCC
Q 045566 76 HTQ---QLPDRCYALTVRYPLMVVGTADRNLVVFNLQNP 111 (112)
Q Consensus 76 ~~~---~~~~~~~~~~~~~~~~~~~~~d~~v~~~d~~~~ 111 (112)
..+ ...+..++|+|+++.+++++.|+.|++||++++
T Consensus 94 ~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~ 132 (377)
T 3dwl_C 94 LVLLRLNRAATFVRWSPNEDKFAVGSGARVISVCYFEQE 132 (377)
T ss_dssp EECCCCSSCEEEEECCTTSSCCEEEESSSCEEECCC---
T ss_pred eEecccCCceEEEEECCCCCEEEEEecCCeEEEEEECCc
Confidence 332 345678899999999999999999999998865
No 50
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=99.91 E-value=4.9e-23 Score=119.23 Aligned_cols=110 Identities=21% Similarity=0.265 Sum_probs=91.3
Q ss_pred CeeEEEcCCCCEEEEEcCCCcEEEEEcCCCCCcEEEeeccCCeeEEEEccCCCEEEEeeCCCcEEEeeCCCCCceEEec-
Q 045566 1 VLCSTWKDDGTTVFSGGCDKQVKMWPLLSGGQPVTVAMHDAPIKEVAWIPEMNLLATGSWDKTLKYWDTRQPNPVHTQQ- 79 (112)
Q Consensus 1 v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~- 79 (112)
|.+++|+|++++|++|+.|+.|++||+.+.+.+..+. +...+.++.|+|++.++ +++.|+.|++||+++...+..+.
T Consensus 218 v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~~-~~~~d~~i~iwd~~~~~~~~~~~~ 295 (340)
T 4aow_A 218 LNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLD-GGDIINALCFSPNRYWL-CAATGPSIKIWDLEGKIIVDELKQ 295 (340)
T ss_dssp EEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEE-CSSCEEEEEECSSSSEE-EEEETTEEEEEETTTTEEEEEECC
T ss_pred EEEEEECCCCCEEEEEeCCCeEEEEEeccCceeeeec-CCceEEeeecCCCCcee-eccCCCEEEEEECCCCeEEEeccc
Confidence 4689999999999999999999999999887776665 45689999999987654 56679999999998776554432
Q ss_pred -----------CCCeEEEEeeCCCEEEEEeCCCcEEEEECcCCC
Q 045566 80 -----------LPDRCYALTVRYPLMVVGTADRNLVVFNLQNPQ 112 (112)
Q Consensus 80 -----------~~~~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~ 112 (112)
..+..++|+|++++|++++.|+.|++||+++|+
T Consensus 296 ~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~Dg~v~iW~~~tGt 339 (340)
T 4aow_A 296 EVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRVWQVTIGT 339 (340)
T ss_dssp C-------CCCCCEEEEEECTTSSEEEEEETTSCEEEEEEEC--
T ss_pred cceeeeccCCCCCEEEEEECCCCCEEEEEeCCCEEEEEeCCCcC
Confidence 234678999999999999999999999999874
No 51
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=99.91 E-value=3.8e-23 Score=130.78 Aligned_cols=111 Identities=16% Similarity=0.255 Sum_probs=101.9
Q ss_pred CeeEEEcCCCCEEEEEcCCCcEEEEEcCCCCCcEEEeeccCCeeEEEEccCCCEEEEeeCCCcEEEeeCCCCCceEEecC
Q 045566 1 VLCSTWKDDGTTVFSGGCDKQVKMWPLLSGGQPVTVAMHDAPIKEVAWIPEMNLLATGSWDKTLKYWDTRQPNPVHTQQL 80 (112)
Q Consensus 1 v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~ 80 (112)
|.+++|+|+++++++++.|+.|++||..+++....+..|...|.+++|+|+++++++++.|+.|++||+.+++.+..+..
T Consensus 16 v~~i~~sp~~~~la~~~~~g~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~ 95 (814)
T 3mkq_A 16 VKGIDFHPTEPWVLTTLYSGRVEIWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGEKVVDFEA 95 (814)
T ss_dssp EEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTCCEEEEEEC
T ss_pred eEEEEECCCCCEEEEEeCCCEEEEEECCCCceEEEEecCCCcEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEec
Confidence 57899999999999999999999999999888888889999999999999999999999999999999999887766543
Q ss_pred ---CCeEEEEeeCCCEEEEEeCCCcEEEEECcCC
Q 045566 81 ---PDRCYALTVRYPLMVVGTADRNLVVFNLQNP 111 (112)
Q Consensus 81 ---~~~~~~~~~~~~~~~~~~~d~~v~~~d~~~~ 111 (112)
.+..++|+|+++.+++++.|+.|++||++++
T Consensus 96 ~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~ 129 (814)
T 3mkq_A 96 HPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENN 129 (814)
T ss_dssp CSSCEEEEEECSSSSEEEEEETTSEEEEEEGGGT
T ss_pred CCCCEEEEEEeCCCCEEEEEcCCCEEEEEECCCC
Confidence 4578999999999999999999999998764
No 52
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=99.91 E-value=3.8e-23 Score=120.92 Aligned_cols=111 Identities=18% Similarity=0.345 Sum_probs=98.0
Q ss_pred CeeEEEcCCCCEEEEEcCCCcEEEEEcCCCC--CcEEEeeccCCeeEEEEccCCCEEEEeeCCCcEEEeeCCCCCceEE-
Q 045566 1 VLCSTWKDDGTTVFSGGCDKQVKMWPLLSGG--QPVTVAMHDAPIKEVAWIPEMNLLATGSWDKTLKYWDTRQPNPVHT- 77 (112)
Q Consensus 1 v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~--~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~- 77 (112)
|.+++|+|+++++++++.|+.|++|++.+++ ....+..|...|.+++|+|++.++++++.|+.|++||+++.+....
T Consensus 11 i~~~~~s~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~ 90 (372)
T 1k8k_C 11 ISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKGRTWKPTL 90 (372)
T ss_dssp CCEEEECTTSSEEEEECSSSEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEEEETTEEEEEE
T ss_pred eEEEEECCCCCEEEEEeCCCEEEEEeCCCCcEEeeeeecCCCCcccEEEEeCCCCEEEEEcCCCeEEEEECCCCeeeeeE
Confidence 6789999999999999999999999998876 6778888999999999999999999999999999999987754333
Q ss_pred ----ecCCCeEEEEeeCCCEEEEEeCCCcEEEEECcCC
Q 045566 78 ----QQLPDRCYALTVRYPLMVVGTADRNLVVFNLQNP 111 (112)
Q Consensus 78 ----~~~~~~~~~~~~~~~~~~~~~~d~~v~~~d~~~~ 111 (112)
+...+..+.|+|+++++++++.|+.|++||++.+
T Consensus 91 ~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~ 128 (372)
T 1k8k_C 91 VILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQE 128 (372)
T ss_dssp ECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETT
T ss_pred EeecCCCceeEEEECCCCCEEEEEeCCCEEEEEEecCC
Confidence 2334578899999999999999999999998765
No 53
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=99.91 E-value=6.9e-23 Score=120.65 Aligned_cols=110 Identities=17% Similarity=0.277 Sum_probs=96.8
Q ss_pred CeeEEEcCCCCEEEEEcCCCcEEEEEcCCCCCcEEEeeccCCeeEEEEccCCC-EEEEeeCCCcEEEeeCCC----CCce
Q 045566 1 VLCSTWKDDGTTVFSGGCDKQVKMWPLLSGGQPVTVAMHDAPIKEVAWIPEMN-LLATGSWDKTLKYWDTRQ----PNPV 75 (112)
Q Consensus 1 v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~~~~~~~~~~i~~w~~~~----~~~~ 75 (112)
|.+++|+|+++++++++.|+.|++||+ +++....+..|...|.+++|+|+++ ++++++.|+.|++||+++ ...+
T Consensus 166 v~~~~~~~~~~~l~~~~~d~~i~i~d~-~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~ 244 (383)
T 3ei3_B 166 YCCVDVSVSRQMLATGDSTGRLLLLGL-DGHEIFKEKLHKAKVTHAEFNPRCDWLMATSSVDATVKLWDLRNIKDKNSYI 244 (383)
T ss_dssp EEEEEEETTTTEEEEEETTSEEEEEET-TSCEEEEEECSSSCEEEEEECSSCTTEEEEEETTSEEEEEEGGGCCSTTCEE
T ss_pred eEEEEECCCCCEEEEECCCCCEEEEEC-CCCEEEEeccCCCcEEEEEECCCCCCEEEEEeCCCEEEEEeCCCCCcccceE
Confidence 468999999999999999999999998 5677778888999999999999988 999999999999999987 4444
Q ss_pred EEe--cCCCeEEEEee-CCCEEEEEeCCCcEEEEECcCC
Q 045566 76 HTQ--QLPDRCYALTV-RYPLMVVGTADRNLVVFNLQNP 111 (112)
Q Consensus 76 ~~~--~~~~~~~~~~~-~~~~~~~~~~d~~v~~~d~~~~ 111 (112)
... ...+..++|+| ++.++++++.|+.|++||++++
T Consensus 245 ~~~~~~~~v~~~~~s~~~~~~l~~~~~d~~i~iwd~~~~ 283 (383)
T 3ei3_B 245 AEMPHEKPVNAAYFNPTDSTKLLTTDQRNEIRVYSSYDW 283 (383)
T ss_dssp EEEECSSCEEEEEECTTTSCEEEEEESSSEEEEEETTBT
T ss_pred EEecCCCceEEEEEcCCCCCEEEEEcCCCcEEEEECCCC
Confidence 433 44567899999 9999999999999999999875
No 54
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=99.91 E-value=3.8e-23 Score=118.64 Aligned_cols=109 Identities=19% Similarity=0.338 Sum_probs=90.0
Q ss_pred CeeEEEcCC-------------CCEEEEEcCCCcEEEEEcCCCC----CcEEEeeccCCeeEEEEccCC---CEEEEeeC
Q 045566 1 VLCSTWKDD-------------GTTVFSGGCDKQVKMWPLLSGG----QPVTVAMHDAPIKEVAWIPEM---NLLATGSW 60 (112)
Q Consensus 1 v~~~~~~~~-------------~~~l~~~~~~~~v~~~~~~~~~----~~~~~~~~~~~v~~~~~~~~~---~~~~~~~~ 60 (112)
|.+++|+|+ +++|++|+.|+.|++||+++.+ ....+.+|...|.+++|+|++ .++++++.
T Consensus 148 v~~~~~~p~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~sp~~~~~~~las~s~ 227 (297)
T 2pm7_B 148 VNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYMASVSQ 227 (297)
T ss_dssp EEEEEECCCC------------CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEET
T ss_pred cceEeecCCcccccccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecCCCCceEEEEECCCCCCceEEEEEEC
Confidence 457889986 5799999999999999998766 344677899999999999984 89999999
Q ss_pred CCcEEEeeCCCCCc--e-EE-----ecCCCeEEEEeeCCCEEEEEeCCCcEEEEECc
Q 045566 61 DKTLKYWDTRQPNP--V-HT-----QQLPDRCYALTVRYPLMVVGTADRNLVVFNLQ 109 (112)
Q Consensus 61 ~~~i~~w~~~~~~~--~-~~-----~~~~~~~~~~~~~~~~~~~~~~d~~v~~~d~~ 109 (112)
|+.|++||+++... . .. +...+..++|+|++++|++++.|+.|++|+..
T Consensus 228 D~~v~iWd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~las~~~D~~v~lw~~~ 284 (297)
T 2pm7_B 228 DRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKEN 284 (297)
T ss_dssp TSCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEETTSCEEEEEEC
T ss_pred CCcEEEEEeCCCCCccceeeeecccCCCcEEEEEECCCCCEEEEEcCCCcEEEEEEC
Confidence 99999999876431 1 11 22345678999999999999999999999976
No 55
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=99.91 E-value=6.3e-23 Score=128.61 Aligned_cols=111 Identities=23% Similarity=0.363 Sum_probs=96.1
Q ss_pred CeeEEEcCCCCEEEEEcCCCcEEEEEcCCCCCcEEEeeccCCeeEEEEccCCCEEEEeeCCCcEEEeeCCCCCceEE---
Q 045566 1 VLCSTWKDDGTTVFSGGCDKQVKMWPLLSGGQPVTVAMHDAPIKEVAWIPEMNLLATGSWDKTLKYWDTRQPNPVHT--- 77 (112)
Q Consensus 1 v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~--- 77 (112)
|.+++|+|++++|++|+.|+.|++||+.++.....+.+|...|.+++|+|++.++++++.|+.|++||.........
T Consensus 433 v~~v~~s~~g~~l~sgs~Dg~v~vwd~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~ 512 (694)
T 3dm0_A 433 VEDVVLSSDGQFALSGSWDGELRLWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLGECKYTISEG 512 (694)
T ss_dssp EEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSS
T ss_pred EEEEEECCCCCEEEEEeCCCcEEEEECCCCcceeEEeCCCCCEEEEEEeCCCCEEEEEeCCCEEEEEECCCCcceeeccC
Confidence 46899999999999999999999999999888888999999999999999999999999999999999865433222
Q ss_pred ---ecCCCeEEEEeeCC--CEEEEEeCCCcEEEEECcCC
Q 045566 78 ---QQLPDRCYALTVRY--PLMVVGTADRNLVVFNLQNP 111 (112)
Q Consensus 78 ---~~~~~~~~~~~~~~--~~~~~~~~d~~v~~~d~~~~ 111 (112)
+...+.++.|+|++ ..+++++.|+.|++||++++
T Consensus 513 ~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~vwd~~~~ 551 (694)
T 3dm0_A 513 GEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNC 551 (694)
T ss_dssp TTSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTC
T ss_pred CCCCCCcEEEEEEeCCCCcceEEEEeCCCeEEEEECCCC
Confidence 12235678898876 57999999999999999875
No 56
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=99.91 E-value=4.5e-23 Score=120.69 Aligned_cols=111 Identities=17% Similarity=0.306 Sum_probs=96.1
Q ss_pred CeeEEEcCCCCEEEEEcCCCcEEEEEcC--CCCCcEEEeeccCCeeEEEEccC--CCEEEEeeCCCcEEEeeCCCCC--c
Q 045566 1 VLCSTWKDDGTTVFSGGCDKQVKMWPLL--SGGQPVTVAMHDAPIKEVAWIPE--MNLLATGSWDKTLKYWDTRQPN--P 74 (112)
Q Consensus 1 v~~~~~~~~~~~l~~~~~~~~v~~~~~~--~~~~~~~~~~~~~~v~~~~~~~~--~~~~~~~~~~~~i~~w~~~~~~--~ 74 (112)
|.+++|+|++++|++++.|+.|++|++. +.+....+..|...|.+++|+++ +.++++++.|+.|++||+++.+ .
T Consensus 14 v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~ 93 (379)
T 3jrp_A 14 IHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEENGRWSQ 93 (379)
T ss_dssp EEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEEETTEEEE
T ss_pred EEEEEEcCCCCEEEEEECCCcEEEEecCCCcceeeeEecCCCCcEEEEEeCCCCCCCEEEEeccCCEEEEEEcCCCceeE
Confidence 5789999999999999999999999987 44455677889999999999876 8999999999999999998875 4
Q ss_pred eEEec---CCCeEEEEeeC--CCEEEEEeCCCcEEEEECcCC
Q 045566 75 VHTQQ---LPDRCYALTVR--YPLMVVGTADRNLVVFNLQNP 111 (112)
Q Consensus 75 ~~~~~---~~~~~~~~~~~--~~~~~~~~~d~~v~~~d~~~~ 111 (112)
+..+. ..+..++|+|+ +..+++++.|+.|++||++++
T Consensus 94 ~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~ 135 (379)
T 3jrp_A 94 IAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKEN 135 (379)
T ss_dssp EEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTT
T ss_pred eeeecCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCC
Confidence 44433 35678899998 899999999999999999875
No 57
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=99.91 E-value=8.5e-23 Score=120.46 Aligned_cols=110 Identities=12% Similarity=0.111 Sum_probs=98.6
Q ss_pred CeeEEEcCCCCEEEEEcCCCcEEEEEcCCCCCcEEEee---c---cCCeeEEEEccCCCEEEEeeCC---CcEEEeeCCC
Q 045566 1 VLCSTWKDDGTTVFSGGCDKQVKMWPLLSGGQPVTVAM---H---DAPIKEVAWIPEMNLLATGSWD---KTLKYWDTRQ 71 (112)
Q Consensus 1 v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~---~---~~~v~~~~~~~~~~~~~~~~~~---~~i~~w~~~~ 71 (112)
|.+++|+|++ .+++++.|+.|++||+++.+....+.. | ...+.+++|+|++.++++++.| +.|++||+++
T Consensus 189 i~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~h~~~~~~i~~i~~~~~~~~l~~~~~d~~~g~i~i~d~~~ 267 (397)
T 1sq9_A 189 ATSVDISERG-LIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEF 267 (397)
T ss_dssp CCEEEECTTS-EEEEECTTSEEEEEETTTTEEEEEEECCC---CCCCCEEEEEECSSTTEEEEEEEETTEEEEEEEETTT
T ss_pred ceEEEECCCc-eEEEEeCCCcEEEEECCCCceeEEEeccccccccCCccceEEECCCCCEEEEEecCCCCceEEEEECCC
Confidence 5689999999 999999999999999998888888887 8 8999999999999999999999 9999999998
Q ss_pred CCceEEecC----------------CCeEEEEeeCCCEEEEEeCCCcEEEEECcCC
Q 045566 72 PNPVHTQQL----------------PDRCYALTVRYPLMVVGTADRNLVVFNLQNP 111 (112)
Q Consensus 72 ~~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~d~~v~~~d~~~~ 111 (112)
.+.+..+.. .+..++|+|+++++++++.|+.|++||++++
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~ 323 (397)
T 1sq9_A 268 GERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDVKTK 323 (397)
T ss_dssp CCEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEETTSEEEEEETTTT
T ss_pred CcccceeccCcccccccccccccCCcEEEEEECCCCCEEEEEeCCCeEEEEEcCCC
Confidence 887766543 4568899999999999999999999999875
No 58
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=99.91 E-value=1e-22 Score=121.68 Aligned_cols=111 Identities=12% Similarity=0.237 Sum_probs=93.7
Q ss_pred CeeEEEcCCC-CEEEEEcCCCcEEEEEcCCCCC----cEEEeeccC------------CeeEEEEccCCCEEEEeeCCCc
Q 045566 1 VLCSTWKDDG-TTVFSGGCDKQVKMWPLLSGGQ----PVTVAMHDA------------PIKEVAWIPEMNLLATGSWDKT 63 (112)
Q Consensus 1 v~~~~~~~~~-~~l~~~~~~~~v~~~~~~~~~~----~~~~~~~~~------------~v~~~~~~~~~~~~~~~~~~~~ 63 (112)
|.+++|+|++ +++++|+.|+.|++||+++++. ...+..|.. .|.+++|+|++.++++++. +.
T Consensus 229 v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-~~ 307 (447)
T 3dw8_B 229 ITAAEFHPNSCNTFVYSSSKGTIRLCDMRASALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY-LS 307 (447)
T ss_dssp EEEEEECSSCTTEEEEEETTSCEEEEETTTCSSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEES-SE
T ss_pred eEEEEECCCCCcEEEEEeCCCeEEEEECcCCccccceeeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeC-Ce
Confidence 4689999998 9999999999999999998876 667777765 8999999999999999998 99
Q ss_pred EEEeeCCC-CCceEEecCCC------------------eEEEEeeCCCEEEEEeCCCcEEEEECcCCC
Q 045566 64 LKYWDTRQ-PNPVHTQQLPD------------------RCYALTVRYPLMVVGTADRNLVVFNLQNPQ 112 (112)
Q Consensus 64 i~~w~~~~-~~~~~~~~~~~------------------~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~ 112 (112)
|++||+++ .+.+..+..+. ..++|+|++.++++++.|+.|++||+++++
T Consensus 308 v~iwd~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~s~~~~~l~s~s~dg~v~iwd~~~~~ 375 (447)
T 3dw8_B 308 VKVWDLNMENRPVETYQVHEYLRSKLCSLYENDCIFDKFECCWNGSDSVVMTGSYNNFFRMFDRNTKR 375 (447)
T ss_dssp EEEEETTCCSSCSCCEESCGGGTTTHHHHHHTSGGGCCCCEEECTTSSEEEEECSTTEEEEEETTTCC
T ss_pred EEEEeCCCCccccceeeccccccccccccccccccccceEEEECCCCCEEEEeccCCEEEEEEcCCCc
Confidence 99999987 66555554322 128999999999999999999999998763
No 59
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=99.91 E-value=2.9e-22 Score=115.71 Aligned_cols=111 Identities=16% Similarity=0.264 Sum_probs=97.6
Q ss_pred CeeEEEcCCCCEEEEEcCCCcEEEEEcCCCC--CcEEEeeccCCeeEEEEccCCCEEEEeeCCCcEEEeeCCCCCceEEe
Q 045566 1 VLCSTWKDDGTTVFSGGCDKQVKMWPLLSGG--QPVTVAMHDAPIKEVAWIPEMNLLATGSWDKTLKYWDTRQPNPVHTQ 78 (112)
Q Consensus 1 v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~--~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~ 78 (112)
|.+++|+|+++.+++++.|+.+++|++.+++ ....+..|...+.+++|+|++.++++++.++.|++||+++.+.+..+
T Consensus 100 v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~~~d~~~~~~~~~~ 179 (337)
T 1gxr_A 100 IRSCKLLPDGCTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQF 179 (337)
T ss_dssp EEEEEECTTSSEEEEEESSSEEEEEECCCC--EEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEE
T ss_pred EEEEEEcCCCCEEEEEcCCCcEEEEECCCCCcceeeecccCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCceeeee
Confidence 4689999999999999999999999998877 34466778889999999999999999999999999999988777666
Q ss_pred cC---CCeEEEEeeCCCEEEEEeCCCcEEEEECcCC
Q 045566 79 QL---PDRCYALTVRYPLMVVGTADRNLVVFNLQNP 111 (112)
Q Consensus 79 ~~---~~~~~~~~~~~~~~~~~~~d~~v~~~d~~~~ 111 (112)
.. .+..++|+|+++.+++++.|+.|++||++++
T Consensus 180 ~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~ 215 (337)
T 1gxr_A 180 QGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREG 215 (337)
T ss_dssp CCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTT
T ss_pred ecccCceEEEEECCCCCEEEEEecCCcEEEEECCCC
Confidence 43 4578899999999999999999999999875
No 60
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=99.91 E-value=7.5e-23 Score=125.95 Aligned_cols=109 Identities=17% Similarity=0.231 Sum_probs=97.5
Q ss_pred CeeEEEcCCCCEEEEEcCCCcEEEEEcCCCCCcEEEee-ccCCeeEEEEcc----------CCCEEEEeeCCCcEEEeeC
Q 045566 1 VLCSTWKDDGTTVFSGGCDKQVKMWPLLSGGQPVTVAM-HDAPIKEVAWIP----------EMNLLATGSWDKTLKYWDT 69 (112)
Q Consensus 1 v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~-~~~~v~~~~~~~----------~~~~~~~~~~~~~i~~w~~ 69 (112)
|.+++|+|++++|++++.|+.|++|++.+++.+..+.. |...|++++|+| ++.++++++.|+.|++||+
T Consensus 491 v~~~~~s~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~~~~~~~~l~~~~~dg~i~iw~~ 570 (615)
T 1pgu_A 491 PSYISISPSETYIAAGDVMGKILLYDLQSREVKTSRWAFRTSKINAISWKPAEKGANEEEIEEDLVATGSLDTNIFIYSV 570 (615)
T ss_dssp EEEEEECTTSSEEEEEETTSCEEEEETTTTEEEECCSCCCSSCEEEEEECCCC------CCSCCEEEEEETTSCEEEEES
T ss_pred eEEEEECCCCCEEEEcCCCCeEEEeeCCCCcceeEeecCCCCceeEEEEcCccccccccccCCCEEEEEcCCCcEEEEEC
Confidence 46899999999999999999999999998888777777 999999999999 9999999999999999999
Q ss_pred CCC-CceEEec---CCCeEEEEeeCCCEEEEEeCCCcEEEEECcC
Q 045566 70 RQP-NPVHTQQ---LPDRCYALTVRYPLMVVGTADRNLVVFNLQN 110 (112)
Q Consensus 70 ~~~-~~~~~~~---~~~~~~~~~~~~~~~~~~~~d~~v~~~d~~~ 110 (112)
.+. +.+..+. ..+..++|+|++. +++++.|+.|++||+.+
T Consensus 571 ~~~~~~~~~~~~h~~~v~~l~~s~~~~-l~s~~~d~~v~iw~~~~ 614 (615)
T 1pgu_A 571 KRPMKIIKALNAHKDGVNNLLWETPST-LVSSGADACIKRWNVVL 614 (615)
T ss_dssp SCTTCCEEETTSSTTCEEEEEEEETTE-EEEEETTSCEEEEEEC-
T ss_pred CCCceechhhhcCccceEEEEEcCCCC-eEEecCCceEEEEeeec
Confidence 987 5665544 3467899999999 99999999999999875
No 61
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=99.91 E-value=2.5e-22 Score=115.95 Aligned_cols=112 Identities=18% Similarity=0.249 Sum_probs=100.9
Q ss_pred CeeEEEcCCCCEEEEEcCCCcEEEEEcCCCCCcEEEeeccCCeeEEEEccCCCEEEEeeCCCcEEEeeCCCCCceEEec-
Q 045566 1 VLCSTWKDDGTTVFSGGCDKQVKMWPLLSGGQPVTVAMHDAPIKEVAWIPEMNLLATGSWDKTLKYWDTRQPNPVHTQQ- 79 (112)
Q Consensus 1 v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~- 79 (112)
|.+++|+|+++.+++++.|+.|++||+++++....+..|...+.+++|+|++..+++++.++.+++||+++.+.+..+.
T Consensus 144 i~~~~~~~~~~~l~~~~~dg~v~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~ 223 (337)
T 1gxr_A 144 CYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQHDF 223 (337)
T ss_dssp EEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEEC
T ss_pred eEEEEECCCCCEEEEEeCCCcEEEEeCCCCceeeeeecccCceEEEEECCCCCEEEEEecCCcEEEEECCCCceEeeecC
Confidence 4688999999999999999999999999888888888899999999999999999999999999999999887766554
Q ss_pred -CCCeEEEEeeCCCEEEEEeCCCcEEEEECcCCC
Q 045566 80 -LPDRCYALTVRYPLMVVGTADRNLVVFNLQNPQ 112 (112)
Q Consensus 80 -~~~~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~ 112 (112)
.....++|+|+++.+++++.++.+++||+++++
T Consensus 224 ~~~v~~~~~s~~~~~l~~~~~~~~i~~~~~~~~~ 257 (337)
T 1gxr_A 224 TSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPD 257 (337)
T ss_dssp SSCEEEEEECTTSSEEEEEETTSCEEEEETTSSC
T ss_pred CCceEEEEECCCCCEEEEEcCCCcEEEEECCCCC
Confidence 345788899999999999999999999998753
No 62
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.91 E-value=5.7e-23 Score=121.85 Aligned_cols=111 Identities=19% Similarity=0.409 Sum_probs=98.6
Q ss_pred CeeEEEcCCC-CEEEEEcCCCcEEEEEcCCCCCcEEE--eeccCCeeEEEEccCCCEEEEeeCCCcEEEeeCCCCCceEE
Q 045566 1 VLCSTWKDDG-TTVFSGGCDKQVKMWPLLSGGQPVTV--AMHDAPIKEVAWIPEMNLLATGSWDKTLKYWDTRQPNPVHT 77 (112)
Q Consensus 1 v~~~~~~~~~-~~l~~~~~~~~v~~~~~~~~~~~~~~--~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~ 77 (112)
|.+++|+|++ +.+++++.|+.|++||+.+++....+ ..|...|.+++|+|++.++++++.|+.|++||+++++.+..
T Consensus 134 v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~ 213 (402)
T 2aq5_A 134 VGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLGPDVHPDTIYSVDWSRDGALICTSCRDKRVRVIEPRKGTVVAE 213 (402)
T ss_dssp EEEEEECSSBTTEEEEEETTSCEEEEETTTTEEEEEECTTTCCSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEE
T ss_pred EEEEEECcCCCCEEEEEcCCCEEEEEECCCCCccEEEecCCCCCceEEEEECCCCCEEEEEecCCcEEEEeCCCCceeee
Confidence 4689999998 69999999999999999988888888 77999999999999999999999999999999999887766
Q ss_pred e-cC----CCeEEEEeeCCCEEEEE---eCCCcEEEEECcCC
Q 045566 78 Q-QL----PDRCYALTVRYPLMVVG---TADRNLVVFNLQNP 111 (112)
Q Consensus 78 ~-~~----~~~~~~~~~~~~~~~~~---~~d~~v~~~d~~~~ 111 (112)
+ .. ....+.|++++.+++++ +.|+.|++||++++
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~d~~i~iwd~~~~ 255 (402)
T 2aq5_A 214 KDRPHEGTRPVHAVFVSEGKILTTGFSRMSERQVALWDTKHL 255 (402)
T ss_dssp EECSSCSSSCCEEEECSTTEEEEEEECTTCCEEEEEEETTBC
T ss_pred eccCCCCCcceEEEEcCCCcEEEEeccCCCCceEEEEcCccc
Confidence 6 22 24678899999999998 78999999999875
No 63
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=99.91 E-value=1.6e-23 Score=123.01 Aligned_cols=109 Identities=18% Similarity=0.270 Sum_probs=87.4
Q ss_pred CeeEEEcCCCCEEEEEcCCCcEEEEEcCCCC---CcEEEeeccCCeeEEEEccCCCEEEEeeCCCcEEEeeCCCCCc---
Q 045566 1 VLCSTWKDDGTTVFSGGCDKQVKMWPLLSGG---QPVTVAMHDAPIKEVAWIPEMNLLATGSWDKTLKYWDTRQPNP--- 74 (112)
Q Consensus 1 v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~---~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~--- 74 (112)
|.+++|+|++++|++++.|+.|++||+.+++ ....+..|...|.+++|+|++..+++++.|+.|++||+++.+.
T Consensus 58 v~~~~~s~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~ 137 (377)
T 3dwl_C 58 VTCVDWAPKSNRIVTCSQDRNAYVYEKRPDGTWKQTLVLLRLNRAATFVRWSPNEDKFAVGSGARVISVCYFEQENDWWV 137 (377)
T ss_dssp EEEEEECTTTCCEEEEETTSSEEEC------CCCCEEECCCCSSCEEEEECCTTSSCCEEEESSSCEEECCC-----CCC
T ss_pred EEEEEEeCCCCEEEEEeCCCeEEEEEcCCCCceeeeeEecccCCceEEEEECCCCCEEEEEecCCeEEEEEECCccccee
Confidence 5789999999999999999999999998876 5566778999999999999999999999999999999987752
Q ss_pred eEEec----CCCeEEEEeeCCCEEEEEeCCCcEEEEECc
Q 045566 75 VHTQQ----LPDRCYALTVRYPLMVVGTADRNLVVFNLQ 109 (112)
Q Consensus 75 ~~~~~----~~~~~~~~~~~~~~~~~~~~d~~v~~~d~~ 109 (112)
...+. ..+..++|+|++.++++++.|+.|++||++
T Consensus 138 ~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~ 176 (377)
T 3dwl_C 138 SKHLKRPLRSTILSLDWHPNNVLLAAGCADRKAYVLSAY 176 (377)
T ss_dssp CEEECSSCCSCEEEEEECTTSSEEEEEESSSCEEEEEEC
T ss_pred eeEeecccCCCeEEEEEcCCCCEEEEEeCCCEEEEEEEE
Confidence 33333 345788999999999999999999999985
No 64
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=99.90 E-value=2.7e-22 Score=131.50 Aligned_cols=112 Identities=25% Similarity=0.407 Sum_probs=101.2
Q ss_pred CeeEEEcCCCCEEEEEcCCCcEEEEEcCCCCCcEEEeeccCCeeEEEEccCCCEEEEeeCCCcEEEeeCCCCCceEEecC
Q 045566 1 VLCSTWKDDGTTVFSGGCDKQVKMWPLLSGGQPVTVAMHDAPIKEVAWIPEMNLLATGSWDKTLKYWDTRQPNPVHTQQL 80 (112)
Q Consensus 1 v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~ 80 (112)
|.+++|+|+++++++|+.|+.|++||..+++....+..|...|.+++|+|++.++++++.|+.|++||+.+++.+..+..
T Consensus 618 v~~~~~s~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~ 697 (1249)
T 3sfz_A 618 VYHACFSQDGQRIASCGADKTLQVFKAETGEKLLDIKAHEDEVLCCAFSSDDSYIATCSADKKVKIWDSATGKLVHTYDE 697 (1249)
T ss_dssp EEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEEC
T ss_pred EEEEEECCCCCEEEEEeCCCeEEEEECCCCCEEEEeccCCCCEEEEEEecCCCEEEEEeCCCeEEEEECCCCceEEEEcC
Confidence 57899999999999999999999999999999899999999999999999999999999999999999999988776644
Q ss_pred ---CCeEEEEee--CCCEEEEEeCCCcEEEEECcCCC
Q 045566 81 ---PDRCYALTV--RYPLMVVGTADRNLVVFNLQNPQ 112 (112)
Q Consensus 81 ---~~~~~~~~~--~~~~~~~~~~d~~v~~~d~~~~~ 112 (112)
.+..+.|++ ++..+++++.|+.|++||+++++
T Consensus 698 ~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~ 734 (1249)
T 3sfz_A 698 HSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKE 734 (1249)
T ss_dssp CSSCEEEEEECSSSSCCEEEEEETTSCEEEEETTSSS
T ss_pred CCCcEEEEEEecCCCceEEEEEeCCCeEEEEECCCcc
Confidence 456788888 55689999999999999998763
No 65
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=99.90 E-value=2.7e-23 Score=133.51 Aligned_cols=107 Identities=13% Similarity=0.096 Sum_probs=91.1
Q ss_pred CeeEEEcCCCCEEEEEcCCCcEEEEEcCCCC---------------------------------------------CcEE
Q 045566 1 VLCSTWKDDGTTVFSGGCDKQVKMWPLLSGG---------------------------------------------QPVT 35 (112)
Q Consensus 1 v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~---------------------------------------------~~~~ 35 (112)
|.+++|+|++++||+|+.|++|++|++.+++ ++..
T Consensus 491 V~svafspdg~~LAsgs~DgtV~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 570 (902)
T 2oaj_A 491 VDKISFAAETLELAVSIETGDVVLFKYEVNQFYSVENRPESGDLEMNFRRFSLNNTNGVLVDVRDRAPTGVRQGFMPSTA 570 (902)
T ss_dssp EEEEEEETTTTEEEEEETTSCEEEEEEEECCC---------------CCSCCGGGSSCSEEECGGGCCTTCSEEEEEEEE
T ss_pred eeEEEecCCCCeEEEEecCcEEEEEEecCccccCccccCCCcccceeeeeccccCCccccccccccCCCCCCCccceeEE
Confidence 5789999999999999999999999987652 1446
Q ss_pred EeeccCCeeEEEEccCCCEEEEeeCCCcEEEeeCCCCCceEE---------ecCCCeEEEEe-----eCC---CEEEEEe
Q 045566 36 VAMHDAPIKEVAWIPEMNLLATGSWDKTLKYWDTRQPNPVHT---------QQLPDRCYALT-----VRY---PLMVVGT 98 (112)
Q Consensus 36 ~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~---------~~~~~~~~~~~-----~~~---~~~~~~~ 98 (112)
+..|.+.|++++|+|+| ++++|+.|+.|++||+++...+.. +...+.+++|+ |++ .++++++
T Consensus 571 l~~h~~~V~svafSpdG-~lAsgs~D~tv~lwd~~~~~~~~~~~~~~~~~gh~~~V~sv~Fs~~~~~~Dg~~~~~l~sgs 649 (902)
T 2oaj_A 571 VHANKGKTSAINNSNIG-FVGIAYAAGSLMLIDRRGPAIIYMENIREISGAQSACVTCIEFVIMEYGDDGYSSILMVCGT 649 (902)
T ss_dssp ECCCSCSEEEEEECBTS-EEEEEETTSEEEEEETTTTEEEEEEEGGGTCSSCCCCEEEEEEEEEECTTSSSEEEEEEEEE
T ss_pred EEcCCCcEEEEEecCCc-EEEEEeCCCcEEEEECCCCeEEEEeehhHhccccccceEEEEEEEEecCCCCCcceEEEEEe
Confidence 67899999999999999 999999999999999987655431 12236789999 775 7999999
Q ss_pred CCCcEEEEEC
Q 045566 99 ADRNLVVFNL 108 (112)
Q Consensus 99 ~d~~v~~~d~ 108 (112)
.|+.|++||+
T Consensus 650 ~D~tv~~wd~ 659 (902)
T 2oaj_A 650 DMGEVITYKI 659 (902)
T ss_dssp TTSEEEEEEE
T ss_pred cCCcEEEEEE
Confidence 9999999998
No 66
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.90 E-value=1.7e-22 Score=121.41 Aligned_cols=111 Identities=14% Similarity=0.072 Sum_probs=97.5
Q ss_pred CeeEEEcCCCCEEEEEcCCCcEEEEEcCCCCCcE----EEeeccCCeeEEEEccC---CCEEEEeeCCCcEEEeeCCCCC
Q 045566 1 VLCSTWKDDGTTVFSGGCDKQVKMWPLLSGGQPV----TVAMHDAPIKEVAWIPE---MNLLATGSWDKTLKYWDTRQPN 73 (112)
Q Consensus 1 v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~----~~~~~~~~v~~~~~~~~---~~~~~~~~~~~~i~~w~~~~~~ 73 (112)
|.+++|+|++++|++++.++.+.+|++...+... .+..|...|.+++|+|+ +.++++++.|+.|++||+++.+
T Consensus 152 v~~~~~sp~~~~l~~~~~~g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~ 231 (450)
T 2vdu_B 152 PNAISIAEDDTTVIIADKFGDVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCF 231 (450)
T ss_dssp EEEEEECTTSSEEEEEETTSEEEEEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTT
T ss_pred ceEEEEcCCCCEEEEEeCCCcEEEEecCCcccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCc
Confidence 4689999999999999999999999998776543 66789999999999999 9999999999999999999888
Q ss_pred ceEEe----cCCCeEEEEeeCCCEEEEEeCCCcEEEEECcCCC
Q 045566 74 PVHTQ----QLPDRCYALTVRYPLMVVGTADRNLVVFNLQNPQ 112 (112)
Q Consensus 74 ~~~~~----~~~~~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~ 112 (112)
.+..+ ...+..++|+ ++.++++++.|+.|++||+++++
T Consensus 232 ~~~~~~~~h~~~v~~~~~s-d~~~l~s~~~d~~v~vwd~~~~~ 273 (450)
T 2vdu_B 232 IVDKWLFGHKHFVSSICCG-KDYLLLSAGGDDKIFAWDWKTGK 273 (450)
T ss_dssp CEEEECCCCSSCEEEEEEC-STTEEEEEESSSEEEEEETTTCC
T ss_pred eeeeeecCCCCceEEEEEC-CCCEEEEEeCCCeEEEEECCCCc
Confidence 77653 2345788999 99999999999999999998764
No 67
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=99.90 E-value=3.9e-23 Score=123.76 Aligned_cols=110 Identities=20% Similarity=0.245 Sum_probs=93.7
Q ss_pred CeeEEEcCCCCEEEEEcCCCcEEEEEcCCCCCcEEEeeccCCeeEEEEccCCC-EEEEeeCCCcEEEeeCCCCCceE---
Q 045566 1 VLCSTWKDDGTTVFSGGCDKQVKMWPLLSGGQPVTVAMHDAPIKEVAWIPEMN-LLATGSWDKTLKYWDTRQPNPVH--- 76 (112)
Q Consensus 1 v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~~~~~~~~~~i~~w~~~~~~~~~--- 76 (112)
+.+++|+|++++|++|+.|+.|++||+. ++.+..+..|...|.+++|+|++. ++++++.|+.|++||+++.+...
T Consensus 212 ~~~~~~~~~~~~l~~g~~dg~i~~wd~~-~~~~~~~~~h~~~v~~v~~~p~~~~~~~s~s~d~~v~iwd~~~~~~~~~~~ 290 (435)
T 4e54_B 212 FCSLDVSASSRMVVTGDNVGNVILLNMD-GKELWNLRMHKKKVTHVALNPCCDWFLATASVDQTVKIWDLRQVRGKASFL 290 (435)
T ss_dssp CCCEEEETTTTEEEEECSSSBEEEEESS-SCBCCCSBCCSSCEEEEEECTTCSSEEEEEETTSBCCEEETTTCCSSSCCS
T ss_pred EEEEEECCCCCEEEEEeCCCcEeeeccC-cceeEEEecccceEEeeeecCCCceEEEEecCcceeeEEecccccccceEE
Confidence 3578999999999999999999999986 455667788999999999999765 78899999999999998765332
Q ss_pred ---EecCCCeEEEEeeCCCEEEEEeCCCcEEEEECcCC
Q 045566 77 ---TQQLPDRCYALTVRYPLMVVGTADRNLVVFNLQNP 111 (112)
Q Consensus 77 ---~~~~~~~~~~~~~~~~~~~~~~~d~~v~~~d~~~~ 111 (112)
.+...+..++|+|++.+|++++.|+.|++||++++
T Consensus 291 ~~~~h~~~v~~~~~spdg~~l~s~~~D~~i~iwd~~~~ 328 (435)
T 4e54_B 291 YSLPHRHPVNAACFSPDGARLLTTDQKSEIRVYSASQW 328 (435)
T ss_dssp BCCBCSSCEEECCBCTTSSEEEEEESSSCEEEEESSSS
T ss_pred EeeeccccccceeECCCCCeeEEEcCCCEEEEEECCCC
Confidence 23345678889999999999999999999999875
No 68
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=99.90 E-value=2.5e-22 Score=115.08 Aligned_cols=108 Identities=18% Similarity=0.229 Sum_probs=95.7
Q ss_pred CeeEEEcCCCCEEEEEcCCCcEEEEEcCCCCCcEEEeeccCCeeEEEEccCCCEEEEeeCCCcEEEeeCCCCCceEEecC
Q 045566 1 VLCSTWKDDGTTVFSGGCDKQVKMWPLLSGGQPVTVAMHDAPIKEVAWIPEMNLLATGSWDKTLKYWDTRQPNPVHTQQL 80 (112)
Q Consensus 1 v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~ 80 (112)
|.+++|+|++. +++++.|+.+++||+++++....+..|...+.+++|+|++ .+++++.|+.|++||+++.+.+..+..
T Consensus 187 i~~~~~~~~~~-~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~v~iwd~~~~~~~~~~~~ 264 (313)
T 3odt_A 187 VRHLAVVDDGH-FISCSNDGLIKLVDMHTGDVLRTYEGHESFVYCIKLLPNG-DIVSCGEDRTVRIWSKENGSLKQVITL 264 (313)
T ss_dssp EEEEEEEETTE-EEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTS-CEEEEETTSEEEEECTTTCCEEEEEEC
T ss_pred EEEEEEcCCCe-EEEccCCCeEEEEECCchhhhhhhhcCCceEEEEEEecCC-CEEEEecCCEEEEEECCCCceeEEEec
Confidence 46889999988 8899999999999999999888899999999999999998 588999999999999999887766644
Q ss_pred ---CCeEEEEeeCCCEEEEEeCCCcEEEEECcCC
Q 045566 81 ---PDRCYALTVRYPLMVVGTADRNLVVFNLQNP 111 (112)
Q Consensus 81 ---~~~~~~~~~~~~~~~~~~~d~~v~~~d~~~~ 111 (112)
.+..++|+|++. +++++.|+.|++||++++
T Consensus 265 ~~~~i~~~~~~~~~~-~~~~~~dg~i~iw~~~~~ 297 (313)
T 3odt_A 265 PAISIWSVDCMSNGD-IIVGSSDNLVRIFSQEKS 297 (313)
T ss_dssp SSSCEEEEEECTTSC-EEEEETTSCEEEEESCGG
T ss_pred cCceEEEEEEccCCC-EEEEeCCCcEEEEeCCCC
Confidence 456788999988 677999999999999865
No 69
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=99.90 E-value=4.7e-23 Score=119.17 Aligned_cols=108 Identities=19% Similarity=0.409 Sum_probs=90.1
Q ss_pred eeEEEcCC-----------------CCEEEEEcCCCcEEEEEcCCCC---CcEEEeeccCCeeEEEEccCC----CEEEE
Q 045566 2 LCSTWKDD-----------------GTTVFSGGCDKQVKMWPLLSGG---QPVTVAMHDAPIKEVAWIPEM----NLLAT 57 (112)
Q Consensus 2 ~~~~~~~~-----------------~~~l~~~~~~~~v~~~~~~~~~---~~~~~~~~~~~v~~~~~~~~~----~~~~~ 57 (112)
.+++|+|+ +++|++|+.|+.|++||+.... ....+.+|...|.+++|+|++ .++++
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~~h~~~V~~v~~sp~~~~~~~~las 233 (316)
T 3bg1_A 154 NAVSWAPAVVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTSTIAS 233 (316)
T ss_dssp CCCEECCCCCC------CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEECCBCCSSCEEEEECCCCSSCSCCEEEE
T ss_pred ceEEEccccCCccccccccccCccccceEEEecCCCeEEEEEeCCCCccceeeecccCCCceEEEEecCCCCCCCceEEE
Confidence 46788886 4689999999999999987543 344567899999999999976 78999
Q ss_pred eeCCCcEEEeeCCCC-------CceEEecCCCeEEEEeeCCCEEEEEeCCCcEEEEECc
Q 045566 58 GSWDKTLKYWDTRQP-------NPVHTQQLPDRCYALTVRYPLMVVGTADRNLVVFNLQ 109 (112)
Q Consensus 58 ~~~~~~i~~w~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~~~d~~ 109 (112)
++.|+.|++|++++. +.+..+...+..++|+|++++|++++.|+.|++|+..
T Consensus 234 ~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~v~~v~~sp~g~~las~~~D~~v~lw~~~ 292 (316)
T 3bg1_A 234 CSQDGRVFIWTCDDASSNTWSPKLLHKFNDVVWHVSWSITANILAVSGGDNKVTLWKES 292 (316)
T ss_dssp EETTCEEEEEECSSTTCCCCBCCEEEECSSCEEEEEECTTTCCEEEEESSSCEEEEEEC
T ss_pred EcCCCeEEEEEccCccccchhhhhhhcCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEEC
Confidence 999999999998762 2334455567889999999999999999999999975
No 70
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=99.90 E-value=3.3e-22 Score=125.41 Aligned_cols=110 Identities=19% Similarity=0.309 Sum_probs=95.1
Q ss_pred CeeEEEcCC-CCEEEEEcCCCcEEEEEcCCCCC-----cEEEeeccCCeeEEEEccCCCEEEEeeCCCcEEEeeCCCCCc
Q 045566 1 VLCSTWKDD-GTTVFSGGCDKQVKMWPLLSGGQ-----PVTVAMHDAPIKEVAWIPEMNLLATGSWDKTLKYWDTRQPNP 74 (112)
Q Consensus 1 v~~~~~~~~-~~~l~~~~~~~~v~~~~~~~~~~-----~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~ 74 (112)
|++++|+|+ +++|++|+.|+.|++|++..... ...+.+|...|.+++|+|+++++++++.|+.|++||+.+++.
T Consensus 385 V~~v~~~~~~~~~l~s~s~D~~i~~W~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~sgs~Dg~v~vwd~~~~~~ 464 (694)
T 3dm0_A 385 VTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWDGELRLWDLAAGVS 464 (694)
T ss_dssp EEEEECCTTCCSEEEEEETTSEEEEEECCCSTTCSCEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEE
T ss_pred eEEEEecCCCCCEEEEEeCCCcEEEEEccCCCcccccccceecCCCCcEEEEEECCCCCEEEEEeCCCcEEEEECCCCcc
Confidence 578999986 57999999999999999876432 346778999999999999999999999999999999998877
Q ss_pred eEEec---CCCeEEEEeeCCCEEEEEeCCCcEEEEECcC
Q 045566 75 VHTQQ---LPDRCYALTVRYPLMVVGTADRNLVVFNLQN 110 (112)
Q Consensus 75 ~~~~~---~~~~~~~~~~~~~~~~~~~~d~~v~~~d~~~ 110 (112)
+..+. ..+.+++|+|++..+++++.|+.|++||+..
T Consensus 465 ~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iwd~~~ 503 (694)
T 3dm0_A 465 TRRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLG 503 (694)
T ss_dssp EEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTS
T ss_pred eeEEeCCCCCEEEEEEeCCCCEEEEEeCCCEEEEEECCC
Confidence 66554 3467889999999999999999999999753
No 71
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.90 E-value=8.3e-22 Score=118.43 Aligned_cols=112 Identities=6% Similarity=-0.054 Sum_probs=96.3
Q ss_pred CeeEEEcCCCCEE-EEEcCCCcEEEEEcC--CCCCcEEEe--eccCCeeEEEEccCCCEEEEeeCCCcEEEeeCCCCCce
Q 045566 1 VLCSTWKDDGTTV-FSGGCDKQVKMWPLL--SGGQPVTVA--MHDAPIKEVAWIPEMNLLATGSWDKTLKYWDTRQPNPV 75 (112)
Q Consensus 1 v~~~~~~~~~~~l-~~~~~~~~v~~~~~~--~~~~~~~~~--~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~ 75 (112)
|.+++|+|++++| ++++.|+.|++|++. +++....+. .+...+.+++|+|++.++++++.++.+++|++.+.+..
T Consensus 105 v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~g~v~~~~~~~~~~~ 184 (450)
T 2vdu_B 105 IRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAEDDTTVIIADKFGDVYSIDINSIPEE 184 (450)
T ss_dssp EEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEETTSCCCS
T ss_pred eEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCceeeeeecccCCCCceEEEEcCCCCEEEEEeCCCcEEEEecCCcccc
Confidence 4689999999996 899999999999998 777777665 56688999999999999999999999999998776532
Q ss_pred -------EEecCCCeEEEEeeC---CCEEEEEeCCCcEEEEECcCCC
Q 045566 76 -------HTQQLPDRCYALTVR---YPLMVVGTADRNLVVFNLQNPQ 112 (112)
Q Consensus 76 -------~~~~~~~~~~~~~~~---~~~~~~~~~d~~v~~~d~~~~~ 112 (112)
..+...+..++|+|+ +.++++++.|+.|++||+++++
T Consensus 185 ~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~ 231 (450)
T 2vdu_B 185 KFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCF 231 (450)
T ss_dssp SCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTT
T ss_pred cccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCc
Confidence 334456788999999 8899999999999999998753
No 72
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=99.90 E-value=9.5e-23 Score=121.78 Aligned_cols=108 Identities=15% Similarity=0.326 Sum_probs=90.1
Q ss_pred CeeEEEcCCCCEEEEEcCCCcEEEEEcCCCC-----------CcEEEeecc------------CCeeEEEEccCC--CEE
Q 045566 1 VLCSTWKDDGTTVFSGGCDKQVKMWPLLSGG-----------QPVTVAMHD------------APIKEVAWIPEM--NLL 55 (112)
Q Consensus 1 v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~-----------~~~~~~~~~------------~~v~~~~~~~~~--~~~ 55 (112)
|.+++|+|++++|++|+.|+.|++|++.+.+ ....+.+|. ..|.+++|+|++ ..+
T Consensus 31 V~~v~~s~~g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~~~~~~l 110 (447)
T 3dw8_B 31 ISTVEFNHSGELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQKNAAQF 110 (447)
T ss_dssp EEEEEECSSSSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEECCCCSSSEE
T ss_pred EEEEEECCCCCEEEEEcCCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEEcCCCCcceE
Confidence 5789999999999999999999999998766 355677887 889999999987 799
Q ss_pred EEeeCCCcEEEeeCCCCCce-------------------------------------------EEecCCCeEEEEeeCCC
Q 045566 56 ATGSWDKTLKYWDTRQPNPV-------------------------------------------HTQQLPDRCYALTVRYP 92 (112)
Q Consensus 56 ~~~~~~~~i~~w~~~~~~~~-------------------------------------------~~~~~~~~~~~~~~~~~ 92 (112)
++++.|+.|++||+.+.+.. ..+...+..++|+|+++
T Consensus 111 ~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~ 190 (447)
T 3dw8_B 111 LLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINSISINSDYE 190 (447)
T ss_dssp EEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCEEEECTTSS
T ss_pred EEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceEEEEEcCCCC
Confidence 99999999999998653221 12334567899999999
Q ss_pred EEEEEeCCCcEEEEECc
Q 045566 93 LMVVGTADRNLVVFNLQ 109 (112)
Q Consensus 93 ~~~~~~~d~~v~~~d~~ 109 (112)
+++++ .|+.|++||++
T Consensus 191 ~l~s~-~d~~i~iwd~~ 206 (447)
T 3dw8_B 191 TYLSA-DDLRINLWHLE 206 (447)
T ss_dssp EEEEE-CSSEEEEEETT
T ss_pred EEEEe-CCCeEEEEECC
Confidence 99998 79999999987
No 73
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=99.90 E-value=2.7e-22 Score=128.92 Aligned_cols=109 Identities=9% Similarity=0.118 Sum_probs=94.6
Q ss_pred CeeEEEcCCCCEEEEEcCCCcEEEEEcCCCCCcEEEeeccCCeeEEEEccCCCEEEEeeCCCcEEEeeCCCCCceEEecC
Q 045566 1 VLCSTWKDDGTTVFSGGCDKQVKMWPLLSGGQPVTVAMHDAPIKEVAWIPEMNLLATGSWDKTLKYWDTRQPNPVHTQQL 80 (112)
Q Consensus 1 v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~ 80 (112)
|.+++|+|++++||+|+.|+.|++|+....+....+ .|...|.+++|+| ++++++++.|+.|++||+++++.+..+..
T Consensus 20 V~~lafspdg~~lAsgs~Dg~I~lw~~~~~~~~~~~-~~~~~V~~l~fsp-g~~L~S~s~D~~v~lWd~~~~~~~~~~~~ 97 (902)
T 2oaj_A 20 PIAAAFDFTQNLLAIATVTGEVHIYGQQQVEVVIKL-EDRSAIKEMRFVK-GIYLVVINAKDTVYVLSLYSQKVLTTVFV 97 (902)
T ss_dssp EEEEEEETTTTEEEEEETTSEEEEECSTTCEEEEEC-SSCCCEEEEEEET-TTEEEEEETTCEEEEEETTTCSEEEEEEC
T ss_pred cEEEEECCCCCEEEEEeCCCEEEEEeCCCcEEEEEc-CCCCCEEEEEEcC-CCEEEEEECcCeEEEEECCCCcEEEEEcC
Confidence 578999999999999999999999997655443333 4778999999999 88999999999999999999887766543
Q ss_pred --CCeEEEEeeCCCEEEEEeCCCcEEEEECcCC
Q 045566 81 --PDRCYALTVRYPLMVVGTADRNLVVFNLQNP 111 (112)
Q Consensus 81 --~~~~~~~~~~~~~~~~~~~d~~v~~~d~~~~ 111 (112)
.+..++|+|+++++++|+.||.|++||++++
T Consensus 98 ~~~V~~v~~sp~g~~l~sgs~dg~V~lwd~~~~ 130 (902)
T 2oaj_A 98 PGKITSIDTDASLDWMLIGLQNGSMIVYDIDRD 130 (902)
T ss_dssp SSCEEEEECCTTCSEEEEEETTSCEEEEETTTT
T ss_pred CCCEEEEEECCCCCEEEEEcCCCcEEEEECCCC
Confidence 4678899999999999999999999999764
No 74
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.90 E-value=1.4e-21 Score=114.61 Aligned_cols=106 Identities=21% Similarity=0.172 Sum_probs=88.8
Q ss_pred EEEcCCCCEEEE--EcCCCcEEEEEcCCCC---------------C-cEEEeeccCCeeEEEEccCCCEEEEeeCCCc-E
Q 045566 4 STWKDDGTTVFS--GGCDKQVKMWPLLSGG---------------Q-PVTVAMHDAPIKEVAWIPEMNLLATGSWDKT-L 64 (112)
Q Consensus 4 ~~~~~~~~~l~~--~~~~~~v~~~~~~~~~---------------~-~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~-i 64 (112)
+++++ ..++. |+.+|.|++||+.+++ + ...+.+|...|.+++|+|++.++++++.|+. |
T Consensus 143 ~~~s~--~~la~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s~s~d~~~v 220 (355)
T 3vu4_A 143 CEFSN--GLLVYSNEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDMVATCSQDGTII 220 (355)
T ss_dssp EEEET--TEEEEEESSCTTCEEEEECCC------------------CCEEECCCSSCEEEEEECTTSSEEEEEETTCSEE
T ss_pred EEEEc--cEEEEeCCCcCcEEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECCCCCEEEEEeCCCCEE
Confidence 34555 45555 6889999999998755 2 5778899999999999999999999999998 9
Q ss_pred EEeeCCCCCceEEec-----CCCeEEEEeeCCCEEEEEeCCCcEEEEECcCC
Q 045566 65 KYWDTRQPNPVHTQQ-----LPDRCYALTVRYPLMVVGTADRNLVVFNLQNP 111 (112)
Q Consensus 65 ~~w~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~d~~v~~~d~~~~ 111 (112)
++||+++++.+..+. ..+..++|+|+++++++++.|+.|++||++++
T Consensus 221 ~iwd~~~~~~~~~~~~g~h~~~v~~~~~s~~~~~l~s~s~d~~v~iw~~~~~ 272 (355)
T 3vu4_A 221 RVFKTEDGVLVREFRRGLDRADVVDMKWSTDGSKLAVVSDKWTLHVFEIFND 272 (355)
T ss_dssp EEEETTTCCEEEEEECTTCCSCEEEEEECTTSCEEEEEETTCEEEEEESSCC
T ss_pred EEEECCCCcEEEEEEcCCCCCcEEEEEECCCCCEEEEEECCCEEEEEEccCC
Confidence 999999998887665 24578999999999999999999999999764
No 75
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.90 E-value=2.1e-22 Score=123.29 Aligned_cols=106 Identities=8% Similarity=0.041 Sum_probs=87.9
Q ss_pred CeeEEEcCCCCEEEEEcCCCcEEEEEcCCCCCcEEEeeccC-----CeeEEEEccCCCEEEEeeCCCcEEEeeCCCCCc-
Q 045566 1 VLCSTWKDDGTTVFSGGCDKQVKMWPLLSGGQPVTVAMHDA-----PIKEVAWIPEMNLLATGSWDKTLKYWDTRQPNP- 74 (112)
Q Consensus 1 v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~-----~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~- 74 (112)
|.+++|+|+|..|++++.||.|++|+... .+..+. |.. .+.+++|+|+|+++++|+.||.|++||+.+++.
T Consensus 88 V~~vawSPdG~~LAs~s~dg~V~iwd~~~--~l~~l~-~~~~~~~~sv~svafSPDG~~LAsgs~DGtVkIWd~~~~~l~ 164 (588)
T 2j04_A 88 PRVCKPSPIDDWMAVLSNNGNVSVFKDNK--MLTNLD-SKGNLSSRTYHCFEWNPIESSIVVGNEDGELQFFSIRKNSEN 164 (588)
T ss_dssp EEEEEECSSSSCEEEEETTSCEEEEETTE--EEEECC-CSSCSTTTCEEEEEECSSSSCEEEEETTSEEEEEECCCCTTT
T ss_pred EEEEEECCCCCEEEEEeCCCcEEEEeCCc--eeeecc-CCCccccccEEEEEEcCCCCEEEEEcCCCEEEEEECCCCccc
Confidence 57899999999999999999999999543 334445 554 499999999999999999999999999988752
Q ss_pred ------eEEec-------CCCeEEEEeeCCCEEEEEeCCCcEEEEECcCC
Q 045566 75 ------VHTQQ-------LPDRCYALTVRYPLMVVGTADRNLVVFNLQNP 111 (112)
Q Consensus 75 ------~~~~~-------~~~~~~~~~~~~~~~~~~~~d~~v~~~d~~~~ 111 (112)
+..+. ..+..++|+|++ +++++.|+.+++||+...
T Consensus 165 ~~~~i~l~ti~~~~~gh~~~V~sVawSPdg--Laass~D~tVrlWd~~~~ 212 (588)
T 2j04_A 165 TPEFYFESSIRLSDAGSKDWVTHIVWYEDV--LVAALSNNSVFSMTVSAS 212 (588)
T ss_dssp CCCCEEEEEEECSCTTCCCCEEEEEEETTE--EEEEETTCCEEEECCCSS
T ss_pred cccceeeeeeecccccccccEEEEEEcCCc--EEEEeCCCeEEEEECCCC
Confidence 34431 246789999998 888999999999998764
No 76
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=99.89 E-value=1.2e-21 Score=115.97 Aligned_cols=110 Identities=13% Similarity=0.229 Sum_probs=90.1
Q ss_pred CeeEEEcCCCC-EEEEEcCCCcEEEEEc----CCCC------CcEEEee----------ccCCeeEEEEccCCCEEEEee
Q 045566 1 VLCSTWKDDGT-TVFSGGCDKQVKMWPL----LSGG------QPVTVAM----------HDAPIKEVAWIPEMNLLATGS 59 (112)
Q Consensus 1 v~~~~~~~~~~-~l~~~~~~~~v~~~~~----~~~~------~~~~~~~----------~~~~v~~~~~~~~~~~~~~~~ 59 (112)
|.+++|+|+++ +|++++.|+.|++|++ .+++ ....+.. |...|.+++|+|++.++++++
T Consensus 48 v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~ 127 (425)
T 1r5m_A 48 IVSSTWNPLDESILAYGEKNSVARLARIVETDQEGKKYWKLTIIAELRHPFALSASSGKTTNQVTCLAWSHDGNSIVTGV 127 (425)
T ss_dssp CSEEEECSSCTTEEEEEETBTEEEEEEEEEC------CEEEEEEEEEECCCCCC------CBCEEEEEECTTSSEEEEEE
T ss_pred eEEEEECCCCCcEEEEecCCceEEEEEEecccCCccccccccccccccccccccccccCCCCceEEEEEcCCCCEEEEEe
Confidence 57899999999 9999999999999999 7777 3444433 577999999999999999999
Q ss_pred CCCcEEEeeCCCCCceEEec---CCCeEEEEeeCCCEEEEEeCCCcEEEEECcCC
Q 045566 60 WDKTLKYWDTRQPNPVHTQQ---LPDRCYALTVRYPLMVVGTADRNLVVFNLQNP 111 (112)
Q Consensus 60 ~~~~i~~w~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~d~~v~~~d~~~~ 111 (112)
.++.|++|| .+++.+..+. ..+..++|+|+++.+++++.|+.+++||++++
T Consensus 128 ~dg~i~i~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~ 181 (425)
T 1r5m_A 128 ENGELRLWN-KTGALLNVLNFHRAPIVSVKWNKDGTHIISMDVENVTILWNVISG 181 (425)
T ss_dssp TTSCEEEEE-TTSCEEEEECCCCSCEEEEEECTTSSEEEEEETTCCEEEEETTTT
T ss_pred CCCeEEEEe-CCCCeeeeccCCCccEEEEEECCCCCEEEEEecCCeEEEEECCCC
Confidence 999999999 4555555544 34578899999999999999999999999865
No 77
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=99.89 E-value=1.1e-21 Score=113.57 Aligned_cols=111 Identities=20% Similarity=0.294 Sum_probs=93.7
Q ss_pred CeeEEEcCC-CCEEEEEcCCCcEEEEEcCCCCC-----cEEEeeccCCeeEEEEccCCCEEEEeeCCCcEEEeeCCCCCc
Q 045566 1 VLCSTWKDD-GTTVFSGGCDKQVKMWPLLSGGQ-----PVTVAMHDAPIKEVAWIPEMNLLATGSWDKTLKYWDTRQPNP 74 (112)
Q Consensus 1 v~~~~~~~~-~~~l~~~~~~~~v~~~~~~~~~~-----~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~ 74 (112)
|++++|+|+ +++|++|+.|+.|++||+.+.+. ...+.+|...|.+++|+|++.++++++.|+.+++|+......
T Consensus 41 V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~s~dg~~l~s~~~d~~i~~~~~~~~~~ 120 (340)
T 4aow_A 41 VTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTT 120 (340)
T ss_dssp EEEEEECTTCTTEEEEEETTSCEEEEEECCSSSCSEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEE
T ss_pred EEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcccceeeEEEeCCCCCEEEEEECCCCCEEEEEcccccceEEeecccce
Confidence 679999997 68999999999999999876543 345678999999999999999999999999999999988766
Q ss_pred eEEecC---CCeEEEEeeCCCEEEEEeCCCcEEEEECcCC
Q 045566 75 VHTQQL---PDRCYALTVRYPLMVVGTADRNLVVFNLQNP 111 (112)
Q Consensus 75 ~~~~~~---~~~~~~~~~~~~~~~~~~~d~~v~~~d~~~~ 111 (112)
...... ......+.+++..+++++.|+.+++||+...
T Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~~~~~d~~~~ 160 (340)
T 4aow_A 121 TRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGV 160 (340)
T ss_dssp EEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSC
T ss_pred eeeecCCCCceeEEEEeecCccceeecCCCeEEEEEeCCC
Confidence 554433 3356677888999999999999999998653
No 78
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.89 E-value=7.4e-22 Score=114.07 Aligned_cols=112 Identities=13% Similarity=0.279 Sum_probs=90.2
Q ss_pred CeeEEEcCC--CCEEEEEcCCCcEEEEEcCCCCC----------------------------------------------
Q 045566 1 VLCSTWKDD--GTTVFSGGCDKQVKMWPLLSGGQ---------------------------------------------- 32 (112)
Q Consensus 1 v~~~~~~~~--~~~l~~~~~~~~v~~~~~~~~~~---------------------------------------------- 32 (112)
|.+++|+|+ +.++++++.|+.|++||+++.+.
T Consensus 113 v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~ 192 (351)
T 3f3f_A 113 LYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSEMKVLSIPPANHLQSDFCLSWCPSRFSPEKLAVSALEQ 192 (351)
T ss_dssp EEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEEEESCSCCCSSCSCCCEEEEECCCSSSCCEEEEEETTE
T ss_pred eeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhccccccccccccccccCCcccceeEEEeccCCCCCcEEEEecCCC
Confidence 467899998 89999999999999999765431
Q ss_pred --------------cEEEeeccCCeeEEEEccCC----CEEEEeeCCCcEEEeeCCCC----------------------
Q 045566 33 --------------PVTVAMHDAPIKEVAWIPEM----NLLATGSWDKTLKYWDTRQP---------------------- 72 (112)
Q Consensus 33 --------------~~~~~~~~~~v~~~~~~~~~----~~~~~~~~~~~i~~w~~~~~---------------------- 72 (112)
...+..|...|.+++|+|++ .++++++.|+.|++||++..
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (351)
T 3f3f_A 193 AIIYQRGKDGKLHVAAKLPGHKSLIRSISWAPSIGRWYQLIATGCKDGRIRIFKITEKLSPLASEESLTNSNMFDNSADV 272 (351)
T ss_dssp EEEEEECTTSCEEEEEECCCCCSCEEEEEECCCSSCSSEEEEEEETTSCEEEEEEEECC---------------------
T ss_pred cEEEEccCCCceeeeeecCCCCcceeEEEECCCCCCcceEEEEEcCCCeEEEEeCCCCcCccccCCcccceeccCCCccc
Confidence 22334578899999999998 89999999999999998764
Q ss_pred ------------------------CceEEec---CCCeEEEEeeCCCEEEEEeCCCcEEEEECcCCC
Q 045566 73 ------------------------NPVHTQQ---LPDRCYALTVRYPLMVVGTADRNLVVFNLQNPQ 112 (112)
Q Consensus 73 ------------------------~~~~~~~---~~~~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~ 112 (112)
+.+..+. ..+..++|+|+++++++++.|+.|++||+.+++
T Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~v~iw~~~~~~ 339 (351)
T 3f3f_A 273 DMDAQGRSDSNTEEKAELQSNLQVELLSEHDDHNGEVWSVSWNLTGTILSSAGDDGKVRLWKATYSN 339 (351)
T ss_dssp ------------------CCSEEEEEEEEECTTSSCEEEEEECSSSCCEEEEETTSCEEEEEECTTS
T ss_pred ccccccccccccceeeeecccccccEEEEEecccccEEEEEEcCCCCEEEEecCCCcEEEEecCcCc
Confidence 2222232 245788999999999999999999999998753
No 79
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.89 E-value=1.2e-22 Score=124.39 Aligned_cols=110 Identities=14% Similarity=0.046 Sum_probs=91.8
Q ss_pred CeeEEEcCCCCEEEEEcCCCcEEEEEcCCCC-CcEEEeeccCCeeEE--EEccCC-CEEEEeeCCCcEEEeeCCCCCceE
Q 045566 1 VLCSTWKDDGTTVFSGGCDKQVKMWPLLSGG-QPVTVAMHDAPIKEV--AWIPEM-NLLATGSWDKTLKYWDTRQPNPVH 76 (112)
Q Consensus 1 v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~-~~~~~~~~~~~v~~~--~~~~~~-~~~~~~~~~~~i~~w~~~~~~~~~ 76 (112)
|.+++|+++ ..|++|+.|+.|++||++++. +...+..|...|.++ .|+|++ .++++++.|+.|++||+++.+...
T Consensus 269 v~sv~~s~~-~~lasgs~DgtV~lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~~~~~~ 347 (524)
T 2j04_B 269 ITTFDFLSP-TTVVCGFKNGFVAEFDLTDPEVPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKDIATTK 347 (524)
T ss_dssp EEEEEESSS-SEEEEEETTSEEEEEETTBCSSCSEEEECSSSCEEEEEEECCTTSCCEEEEEETTSEEEEECGGGHHHHC
T ss_pred EEEEEecCC-CeEEEEeCCCEEEEEECCCCCCceEEeecccccEEEEEEEcCCCCCeEEEEeccCCeEEEEECCCCCccc
Confidence 468999986 489999999999999998764 445678899999999 567787 899999999999999998766443
Q ss_pred Ee---cC--CCeEEEEeeCCCEEEEEeCCCcEEEEECcCC
Q 045566 77 TQ---QL--PDRCYALTVRYPLMVVGTADRNLVVFNLQNP 111 (112)
Q Consensus 77 ~~---~~--~~~~~~~~~~~~~~~~~~~d~~v~~~d~~~~ 111 (112)
.+ .. .+..++|+|++..+++++.|+.|++||++++
T Consensus 348 ~~~~~~~~~~v~~v~fsp~~~~l~s~~~d~tv~lwd~~~~ 387 (524)
T 2j04_B 348 TTVSRFRGSNLVPVVYCPQIYSYIYSDGASSLRAVPSRAA 387 (524)
T ss_dssp EEEEECSCCSCCCEEEETTTTEEEEECSSSEEEEEETTCT
T ss_pred ccccccccCcccceEeCCCcCeEEEeCCCCcEEEEECccc
Confidence 22 21 3567899999999999999999999999875
No 80
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.89 E-value=1.3e-22 Score=121.78 Aligned_cols=109 Identities=10% Similarity=0.100 Sum_probs=91.6
Q ss_pred CeeEEEcCCCCEEE----EEcCCCcEEEEEcCCC--------CCc---EEEeeccCCeeEEEEccC-CCEEEEeeCCCcE
Q 045566 1 VLCSTWKDDGTTVF----SGGCDKQVKMWPLLSG--------GQP---VTVAMHDAPIKEVAWIPE-MNLLATGSWDKTL 64 (112)
Q Consensus 1 v~~~~~~~~~~~l~----~~~~~~~v~~~~~~~~--------~~~---~~~~~~~~~v~~~~~~~~-~~~~~~~~~~~~i 64 (112)
|.+++|+|++++|+ +++.|+.|++||+.+. +.. ..+.+|...|.+++|+|+ +.++++++.|+.|
T Consensus 95 v~~l~~spdg~~lav~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg~v 174 (434)
T 2oit_A 95 IHHLALSCDNLTLSACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADGSI 174 (434)
T ss_dssp EEEEEECTTSCEEEEEEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETTSCE
T ss_pred ccEEEEcCCCCEEEEEEeccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECCCeE
Confidence 46899999999999 7889999999998654 222 233468899999999996 8899999999999
Q ss_pred EEeeCCCCCceEEe---cCCCeEEEEeeCCCEEEEEeCCCcEEEEECc
Q 045566 65 KYWDTRQPNPVHTQ---QLPDRCYALTVRYPLMVVGTADRNLVVFNLQ 109 (112)
Q Consensus 65 ~~w~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~d~~v~~~d~~ 109 (112)
++||+++....... ...+.+++|+|++.++++++.|+.|++||++
T Consensus 175 ~iwD~~~~~~~~~~~~~~~~v~~v~wspdg~~lasgs~dg~v~iwd~~ 222 (434)
T 2oit_A 175 AVLQVTETVKVCATLPSTVAVTSVCWSPKGKQLAVGKQNGTVVQYLPT 222 (434)
T ss_dssp EEEEESSSEEEEEEECGGGCEEEEEECTTSSCEEEEETTSCEEEECTT
T ss_pred EEEEcCCCcceeeccCCCCceeEEEEcCCCCEEEEEcCCCcEEEEccC
Confidence 99999887554333 3356789999999999999999999999987
No 81
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=99.89 E-value=2e-21 Score=115.35 Aligned_cols=109 Identities=19% Similarity=0.260 Sum_probs=96.0
Q ss_pred CeeEEEcCCCCEEEEEcCCCcEEEEEcCCCCCcEEEeeccCCeeEEEEccCCCEEEEeeCCCcEEEeeCCC-CCceEEe-
Q 045566 1 VLCSTWKDDGTTVFSGGCDKQVKMWPLLSGGQPVTVAMHDAPIKEVAWIPEMNLLATGSWDKTLKYWDTRQ-PNPVHTQ- 78 (112)
Q Consensus 1 v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~-~~~~~~~- 78 (112)
|.+++|+|++++|++|+.|+.|++||+.+++....+..|...|.++.|+ +..+++++.|+.|++||++. ...+..+
T Consensus 137 v~~v~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~dg~i~i~d~~~~~~~~~~~~ 214 (401)
T 4aez_A 137 VASVKWSHDGSFLSVGLGNGLVDIYDVESQTKLRTMAGHQARVGCLSWN--RHVLSSGSRSGAIHHHDVRIANHQIGTLQ 214 (401)
T ss_dssp EEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEEE--TTEEEEEETTSEEEEEETTSSSCEEEEEE
T ss_pred EEEEEECCCCCEEEEECCCCeEEEEECcCCeEEEEecCCCCceEEEEEC--CCEEEEEcCCCCEEEEecccCcceeeEEc
Confidence 5789999999999999999999999999999888899999999999994 67999999999999999984 3444443
Q ss_pred --cCCCeEEEEeeCCCEEEEEeCCCcEEEEECcCC
Q 045566 79 --QLPDRCYALTVRYPLMVVGTADRNLVVFNLQNP 111 (112)
Q Consensus 79 --~~~~~~~~~~~~~~~~~~~~~d~~v~~~d~~~~ 111 (112)
...+..+.|+|++.++++++.|+.|++||++++
T Consensus 215 ~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~ 249 (401)
T 4aez_A 215 GHSSEVCGLAWRSDGLQLASGGNDNVVQIWDARSS 249 (401)
T ss_dssp CCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCS
T ss_pred CCCCCeeEEEEcCCCCEEEEEeCCCeEEEccCCCC
Confidence 345678899999999999999999999999875
No 82
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=99.89 E-value=8.7e-22 Score=115.98 Aligned_cols=108 Identities=16% Similarity=0.221 Sum_probs=93.7
Q ss_pred CeeEEEcCCC-CEEEEEcCCCcEEEEEcCCCCCcEEEe--eccCCeeEEEEcc-CCCEEEEeeCCCcEEEeeCCCCCceE
Q 045566 1 VLCSTWKDDG-TTVFSGGCDKQVKMWPLLSGGQPVTVA--MHDAPIKEVAWIP-EMNLLATGSWDKTLKYWDTRQPNPVH 76 (112)
Q Consensus 1 v~~~~~~~~~-~~l~~~~~~~~v~~~~~~~~~~~~~~~--~~~~~v~~~~~~~-~~~~~~~~~~~~~i~~w~~~~~~~~~ 76 (112)
|.+++|+|++ +++++|+.|+.|++||+.+++....+. +|...|.+++|+| ++..+++++.|+.|++||+++ +.+.
T Consensus 76 v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~-~~~~ 154 (383)
T 3ei3_B 76 VTSLEWHPTHPTTVAVGSKGGDIILWDYDVQNKTSFIQGMGPGDAITGMKFNQFNTNQLFVSSIRGATTLRDFSG-SVIQ 154 (383)
T ss_dssp EEEEEECSSCTTEEEEEEBTSCEEEEETTSTTCEEEECCCSTTCBEEEEEEETTEEEEEEEEETTTEEEEEETTS-CEEE
T ss_pred EEEEEECCCCCCEEEEEcCCCeEEEEeCCCcccceeeecCCcCCceeEEEeCCCCCCEEEEEeCCCEEEEEECCC-CceE
Confidence 5789999998 999999999999999999888776664 5899999999999 789999999999999999986 3333
Q ss_pred Eec------CCCeEEEEeeCCCEEEEEeCCCcEEEEECc
Q 045566 77 TQQ------LPDRCYALTVRYPLMVVGTADRNLVVFNLQ 109 (112)
Q Consensus 77 ~~~------~~~~~~~~~~~~~~~~~~~~d~~v~~~d~~ 109 (112)
.+. ..+..++|+|++..+++++.|+.|++||++
T Consensus 155 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~ 193 (383)
T 3ei3_B 155 VFAKTDSWDYWYCCVDVSVSRQMLATGDSTGRLLLLGLD 193 (383)
T ss_dssp EEECCCCSSCCEEEEEEETTTTEEEEEETTSEEEEEETT
T ss_pred EEeccCCCCCCeEEEEECCCCCEEEEECCCCCEEEEECC
Confidence 332 235789999999999999999999999984
No 83
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=99.89 E-value=2e-22 Score=119.42 Aligned_cols=111 Identities=11% Similarity=0.151 Sum_probs=95.4
Q ss_pred CeeEEEcCCCCEEEEEcCCCcEEEEEcCC----CCCcEEEeeccCCeeEEEEccC-CCEEEEeeCCCcEEEeeCCCCC--
Q 045566 1 VLCSTWKDDGTTVFSGGCDKQVKMWPLLS----GGQPVTVAMHDAPIKEVAWIPE-MNLLATGSWDKTLKYWDTRQPN-- 73 (112)
Q Consensus 1 v~~~~~~~~~~~l~~~~~~~~v~~~~~~~----~~~~~~~~~~~~~v~~~~~~~~-~~~~~~~~~~~~i~~w~~~~~~-- 73 (112)
|.+++|+|++++|++++.|+.|++|++.. .+....+..|...|.+++|+|+ +.++++++.|+.|++||+++.+
T Consensus 70 v~~~~~s~~~~~l~~~~~dg~v~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~ 149 (416)
T 2pm9_A 70 FNDLDWSHNNKIIAGALDNGSLELYSTNEANNAINSMARFSNHSSSVKTVKFNAKQDNVLASGGNNGEIFIWDMNKCTES 149 (416)
T ss_dssp EEEEEECSSSSCEEEEESSSCEEEECCSSTTSCCCEEEECCCSSSCCCEEEECSSSTTBEEEECSSSCEEBCBTTTTSSC
T ss_pred eEEEEECCCCCeEEEEccCCeEEEeecccccccccchhhccCCccceEEEEEcCCCCCEEEEEcCCCeEEEEECCCCccc
Confidence 46899999999999999999999999987 3456677889999999999997 8999999999999999998765
Q ss_pred ----ceE------EecCCCeEEEEeeC-CCEEEEEeCCCcEEEEECcCC
Q 045566 74 ----PVH------TQQLPDRCYALTVR-YPLMVVGTADRNLVVFNLQNP 111 (112)
Q Consensus 74 ----~~~------~~~~~~~~~~~~~~-~~~~~~~~~d~~v~~~d~~~~ 111 (112)
... .+...+..++|+|+ +..+++++.|+.|++||++++
T Consensus 150 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~ 198 (416)
T 2pm9_A 150 PSNYTPLTPGQSMSSVDEVISLAWNQSLAHVFASAGSSNFASIWDLKAK 198 (416)
T ss_dssp TTTCCCBCCCCSCCSSCCCCEEEECSSCTTEEEEESSSSCEEEEETTTT
T ss_pred cccccccccccccCCCCCeeEEEeCCCCCcEEEEEcCCCCEEEEECCCC
Confidence 222 23345678999998 789999999999999999875
No 84
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=99.89 E-value=1.6e-21 Score=127.92 Aligned_cols=111 Identities=26% Similarity=0.360 Sum_probs=100.9
Q ss_pred CeeEEEcCCCCEEEEEcCCCcEEEEEcCCCCCcEEEeeccCCeeEEEEcc--CCCEEEEeeCCCcEEEeeCCCCCceEEe
Q 045566 1 VLCSTWKDDGTTVFSGGCDKQVKMWPLLSGGQPVTVAMHDAPIKEVAWIP--EMNLLATGSWDKTLKYWDTRQPNPVHTQ 78 (112)
Q Consensus 1 v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~~~~~~~~~~~~i~~w~~~~~~~~~~~ 78 (112)
|.+++|+|+++++++++.|+.|++||+.+++....+..|...|.+++|+| ++..+++++.|+.|++||+++++.+..+
T Consensus 660 v~~~~~s~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~ 739 (1249)
T 3sfz_A 660 VLCCAFSSDDSYIATCSADKKVKIWDSATGKLVHTYDEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKECRNTM 739 (1249)
T ss_dssp EEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSCCEEEEEETTSCEEEEETTSSSEEEEE
T ss_pred EEEEEEecCCCEEEEEeCCCeEEEEECCCCceEEEEcCCCCcEEEEEEecCCCceEEEEEeCCCeEEEEECCCcchhhee
Confidence 57899999999999999999999999999999999999999999999999 5668999999999999999998877665
Q ss_pred cC---CCeEEEEeeCCCEEEEEeCCCcEEEEECcCC
Q 045566 79 QL---PDRCYALTVRYPLMVVGTADRNLVVFNLQNP 111 (112)
Q Consensus 79 ~~---~~~~~~~~~~~~~~~~~~~d~~v~~~d~~~~ 111 (112)
.. .+..++|+|+++.+++++.|+.|++||++++
T Consensus 740 ~~h~~~v~~~~~sp~~~~l~s~s~dg~v~vwd~~~~ 775 (1249)
T 3sfz_A 740 FGHTNSVNHCRFSPDDELLASCSADGTLRLWDVRSA 775 (1249)
T ss_dssp CCCSSCEEEEEECSSTTEEEEEESSSEEEEEEGGGT
T ss_pred cCCCCCEEEEEEecCCCEEEEEECCCeEEEEeCCCC
Confidence 44 4578899999999999999999999998764
No 85
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=99.89 E-value=1.7e-22 Score=117.59 Aligned_cols=112 Identities=12% Similarity=0.181 Sum_probs=92.8
Q ss_pred CeeEEEcC---CCCEEEEEcCCCcEEEEEcCCCCCcEEEe-----eccCCeeEEEEccCCC-EEEEeeCCCcEEEeeCCC
Q 045566 1 VLCSTWKD---DGTTVFSGGCDKQVKMWPLLSGGQPVTVA-----MHDAPIKEVAWIPEMN-LLATGSWDKTLKYWDTRQ 71 (112)
Q Consensus 1 v~~~~~~~---~~~~l~~~~~~~~v~~~~~~~~~~~~~~~-----~~~~~v~~~~~~~~~~-~~~~~~~~~~i~~w~~~~ 71 (112)
|.+++|+| ++..+++++.|+.|++||+++.+....+. .|...|.+++|+|++. ++++++.|+.|++||++.
T Consensus 212 v~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~ 291 (357)
T 3i2n_A 212 VCSLEFDRKDISMNKLVATSLEGKFHVFDMRTQHPTKGFASVSEKAHKSTVWQVRHLPQNRELFLTAGGAGGLHLWKYEY 291 (357)
T ss_dssp EEEEEESCSSSSCCEEEEEESTTEEEEEEEEEEETTTEEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEEEEC
T ss_pred eEEEEcCCCCCCCCEEEEECCCCeEEEEeCcCCCcccceeeeccCCCcCCEEEEEECCCCCcEEEEEeCCCcEEEeecCC
Confidence 46899999 89999999999999999998776655444 7899999999999988 899999999999999875
Q ss_pred CCc-------------------eEEe---cCCCeEEEEeeCCCEEE-EEeCCCcEEEEECcCCC
Q 045566 72 PNP-------------------VHTQ---QLPDRCYALTVRYPLMV-VGTADRNLVVFNLQNPQ 112 (112)
Q Consensus 72 ~~~-------------------~~~~---~~~~~~~~~~~~~~~~~-~~~~d~~v~~~d~~~~~ 112 (112)
... +..+ ...+..++|+|++++++ +++.|+.|++||+.+++
T Consensus 292 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~s~~~d~~i~iw~~~~~~ 355 (357)
T 3i2n_A 292 PIQRSKKDSEGIEMGVAGSVSLLQNVTLSTQPISSLDWSPDKRGLCVCSSFDQTVRVLIVTKLN 355 (357)
T ss_dssp CSCC--CCTTSCCCCCCCEEEEEEEEECCSSCEEEEEECSSSTTEEEEEETTSEEEEEEECC--
T ss_pred CcccccccCCCCccccccccceeeccccCCCCeeEEEEcCCCCeEEEEecCCCcEEEEECCCcc
Confidence 432 2222 33457899999999888 79999999999998763
No 86
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=99.89 E-value=8.8e-23 Score=121.91 Aligned_cols=111 Identities=14% Similarity=0.171 Sum_probs=93.1
Q ss_pred CeeEEEcCCCCEEEEEcCCCcEEEEEcCCCCCcEEEe-eccCCeeEEEEcc----CCCEEEEeeCCCcEEEeeCCCCCce
Q 045566 1 VLCSTWKDDGTTVFSGGCDKQVKMWPLLSGGQPVTVA-MHDAPIKEVAWIP----EMNLLATGSWDKTLKYWDTRQPNPV 75 (112)
Q Consensus 1 v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~~-~~~~~v~~~~~~~----~~~~~~~~~~~~~i~~w~~~~~~~~ 75 (112)
|.+++|+|++++|++|+.|+.|++||+++++....+. .|...|.+++|+| ++.++++++.|+.|++||+++++.+
T Consensus 217 v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~ 296 (437)
T 3gre_A 217 VSSICIDEECCVLILGTTRGIIDIWDIRFNVLIRSWSFGDHAPITHVEVCQFYGKNSVIVVGGSSKTFLTIWNFVKGHCQ 296 (437)
T ss_dssp EEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEEBCTTCEEEEEEEECTTTCTTEEEEEEESTTEEEEEEETTTTEEE
T ss_pred eEEEEECCCCCEEEEEcCCCeEEEEEcCCccEEEEEecCCCCceEEEEeccccCCCccEEEEEcCCCcEEEEEcCCCcEE
Confidence 5789999999999999999999999999887777765 6778999996664 5779999999999999999988765
Q ss_pred EEecC-----------------------------CCeEEEEeeCCCEEEEEeCCCcEEEEECcCCC
Q 045566 76 HTQQL-----------------------------PDRCYALTVRYPLMVVGTADRNLVVFNLQNPQ 112 (112)
Q Consensus 76 ~~~~~-----------------------------~~~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~ 112 (112)
..+.. .+..++|+ ++.++++++.|+.|++||+++++
T Consensus 297 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~-~~~~l~s~~~d~~i~~wd~~~~~ 361 (437)
T 3gre_A 297 YAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVS-NDKILLTDEATSSIVMFSLNELS 361 (437)
T ss_dssp EEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEE-TTEEEEEEGGGTEEEEEETTCGG
T ss_pred EEEEcCCCCCccceecccccccccceecccccCCceEEEEEC-CceEEEecCCCCeEEEEECCCcc
Confidence 54431 14567787 77899999999999999998753
No 87
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=99.89 E-value=2.1e-21 Score=114.56 Aligned_cols=112 Identities=14% Similarity=0.323 Sum_probs=90.8
Q ss_pred CeeEEEcCCCC-EEEEEcCCCcEEEEEcCCCC-CcEEE---------------eeccCCeeEEEEccCCCEEEEeeCCCc
Q 045566 1 VLCSTWKDDGT-TVFSGGCDKQVKMWPLLSGG-QPVTV---------------AMHDAPIKEVAWIPEMNLLATGSWDKT 63 (112)
Q Consensus 1 v~~~~~~~~~~-~l~~~~~~~~v~~~~~~~~~-~~~~~---------------~~~~~~v~~~~~~~~~~~~~~~~~~~~ 63 (112)
|.+++|+|+++ .+++++.|+.|++||++... ....+ ..|...|.+++|+|++.++++++.|+.
T Consensus 189 v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~ 268 (408)
T 4a11_B 189 ILAVSWSPRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTSDGLHLLTVGTDNR 268 (408)
T ss_dssp EEEEEECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECTTSSEEEEEETTSC
T ss_pred EEEEEECCCCCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeeccccccccCceeEEEEcCCCCEEEEecCCCe
Confidence 46899999988 58999999999999998765 22332 467889999999999999999999999
Q ss_pred EEEeeCCCCCce-----------------------------------------------EEe---cCCCeEEEEeeCCCE
Q 045566 64 LKYWDTRQPNPV-----------------------------------------------HTQ---QLPDRCYALTVRYPL 93 (112)
Q Consensus 64 i~~w~~~~~~~~-----------------------------------------------~~~---~~~~~~~~~~~~~~~ 93 (112)
+++||+++.+.. ..+ ...+..++|+|++++
T Consensus 269 i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~ 348 (408)
T 4a11_B 269 MRLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYGSTIAVYTVYSGEQITMLKGHYKTVDCCVFQSNFQE 348 (408)
T ss_dssp EEEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEETTEEEEEETTTCCEEEEECCCSSCEEEEEEETTTTE
T ss_pred EEEEECCCCccceeccccccccccccceeEEecCCCceEEEEecCCEEEEEECcCCcceeeeccCCCeEEEEEEcCCCCE
Confidence 999998765321 111 223467899999999
Q ss_pred EEEEeCCCcEEEEECcCCC
Q 045566 94 MVVGTADRNLVVFNLQNPQ 112 (112)
Q Consensus 94 ~~~~~~d~~v~~~d~~~~~ 112 (112)
+++++.||.|++||+++++
T Consensus 349 l~s~~~dg~i~iw~~~~~~ 367 (408)
T 4a11_B 349 LYSGSRDCNILAWVPSLYE 367 (408)
T ss_dssp EEEEETTSCEEEEEECC--
T ss_pred EEEECCCCeEEEEeCCCCC
Confidence 9999999999999998763
No 88
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.89 E-value=3.3e-22 Score=118.60 Aligned_cols=111 Identities=15% Similarity=0.098 Sum_probs=89.0
Q ss_pred CeeEEEcC--------CCCEEEEEcCCCcEEEEEcCCCCCcEEEeeccCCeeEEEEccCC-CEEEEeeCCCcEEEeeCCC
Q 045566 1 VLCSTWKD--------DGTTVFSGGCDKQVKMWPLLSGGQPVTVAMHDAPIKEVAWIPEM-NLLATGSWDKTLKYWDTRQ 71 (112)
Q Consensus 1 v~~~~~~~--------~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~~~~~~~~~~i~~w~~~~ 71 (112)
|.+++|+| ++++|++|+.|++|++||+.+..+...+..|...+.+++|+|++ .++++++.|+.|++||+++
T Consensus 139 v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t 218 (393)
T 4gq1_A 139 VNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRLTDEGPILAGYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTL 218 (393)
T ss_dssp EEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEEETTEEEEEEEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTC
T ss_pred eEEEEEccccccccCCCCCEEEEEECCCeEEEEECCCCceeeeecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCC
Confidence 56889987 78999999999999999998888888888899999999999976 4799999999999999987
Q ss_pred CCceEEe----------------------------cCCCeEEEEe-eCCCEEEEEeCCCcEEEEECcCC
Q 045566 72 PNPVHTQ----------------------------QLPDRCYALT-VRYPLMVVGTADRNLVVFNLQNP 111 (112)
Q Consensus 72 ~~~~~~~----------------------------~~~~~~~~~~-~~~~~~~~~~~d~~v~~~d~~~~ 111 (112)
++..... ...+..+.|. +++..+++++.|+.+++||++.+
T Consensus 219 ~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~ 287 (393)
T 4gq1_A 219 NLSAEENSQTELVKNPWLLTLNTLPLVNTCHSSGIASSLANVRWIGSDGSGILAMCKSGAWLRWNLFAN 287 (393)
T ss_dssp CC----------CSCCCSEEEESGGGC------CCSSSCSEEEEETTTTCEEEEECTTSEEEEEEC---
T ss_pred CcccccccccCCcccceEEecccccceeeeecccccccceeeeeecCCCCEEEEEeCCCCEEEEECccC
Confidence 6533211 1122455665 78999999999999999998764
No 89
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=99.89 E-value=8.1e-22 Score=116.72 Aligned_cols=109 Identities=16% Similarity=0.279 Sum_probs=99.0
Q ss_pred CeeEEEcCCCCEEEEEcCCCcEEEEEcCCCCCcEEEeeccCCeeEEEEccCCCEEEEeeCCCcEEEeeCCCCCceEEecC
Q 045566 1 VLCSTWKDDGTTVFSGGCDKQVKMWPLLSGGQPVTVAMHDAPIKEVAWIPEMNLLATGSWDKTLKYWDTRQPNPVHTQQL 80 (112)
Q Consensus 1 v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~ 80 (112)
|.+++|+|+++++++++.|+.|++||+.+++....+..|...+.++.|+|++ .+++++.++.|++||+++.+.+..+..
T Consensus 250 i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~~~~~ 328 (425)
T 1r5m_A 250 ISVLEFNDTNKLLLSASDDGTLRIWHGGNGNSQNCFYGHSQSIVSASWVGDD-KVISCSMDGSVRLWSLKQNTLLALSIV 328 (425)
T ss_dssp EEEEEEETTTTEEEEEETTSCEEEECSSSBSCSEEECCCSSCEEEEEEETTT-EEEEEETTSEEEEEETTTTEEEEEEEC
T ss_pred eEEEEECCCCCEEEEEcCCCEEEEEECCCCccceEecCCCccEEEEEECCCC-EEEEEeCCCcEEEEECCCCcEeEeccc
Confidence 4689999999999999999999999999988888888899999999999998 999999999999999998877766543
Q ss_pred ---CCeEEEEeeCCCEEEEEeCCCcEEEEECcC
Q 045566 81 ---PDRCYALTVRYPLMVVGTADRNLVVFNLQN 110 (112)
Q Consensus 81 ---~~~~~~~~~~~~~~~~~~~d~~v~~~d~~~ 110 (112)
.+..++|+|++.++++++.|+.|++||+++
T Consensus 329 ~~~~i~~~~~s~~~~~l~~~~~dg~i~i~~~~~ 361 (425)
T 1r5m_A 329 DGVPIFAGRISQDGQKYAVAFMDGQVNVYDLKK 361 (425)
T ss_dssp TTCCEEEEEECTTSSEEEEEETTSCEEEEECHH
T ss_pred CCccEEEEEEcCCCCEEEEEECCCeEEEEECCC
Confidence 457889999999999999999999999875
No 90
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=99.89 E-value=6.2e-22 Score=118.27 Aligned_cols=106 Identities=11% Similarity=0.167 Sum_probs=92.2
Q ss_pred EcCCCCEEEEEcCCCcEEEEEcCCCCCcEEEee--ccCCeeEEEEccCCCEEEEeeCCCcEEEeeCCCCCceEEecC---
Q 045566 6 WKDDGTTVFSGGCDKQVKMWPLLSGGQPVTVAM--HDAPIKEVAWIPEMNLLATGSWDKTLKYWDTRQPNPVHTQQL--- 80 (112)
Q Consensus 6 ~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~--- 80 (112)
+++++..+++++.|+.|++||+++++.+..+.. |...|.+++|+|++.++++++.|+.|++||+++.+.+..+..
T Consensus 178 ~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~ 257 (437)
T 3gre_A 178 VNEEKSLLVALTNLSRVIIFDIRTLERLQIIENSPRHGAVSSICIDEECCVLILGTTRGIIDIWDIRFNVLIRSWSFGDH 257 (437)
T ss_dssp ECSSCEEEEEEETTSEEEEEETTTCCEEEEEECCGGGCCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEEBCTTC
T ss_pred EcCCCCEEEEEeCCCeEEEEeCCCCeeeEEEccCCCCCceEEEEECCCCCEEEEEcCCCeEEEEEcCCccEEEEEecCCC
Confidence 567899999999999999999999998888877 889999999999999999999999999999999888776642
Q ss_pred -CCeEEEEe----eCCCEEEEEeCCCcEEEEECcCC
Q 045566 81 -PDRCYALT----VRYPLMVVGTADRNLVVFNLQNP 111 (112)
Q Consensus 81 -~~~~~~~~----~~~~~~~~~~~d~~v~~~d~~~~ 111 (112)
.+..++++ +++.++++++.|+.|++||++++
T Consensus 258 ~~v~~~~~~~~~s~~~~~l~s~~~dg~i~iwd~~~~ 293 (437)
T 3gre_A 258 APITHVEVCQFYGKNSVIVVGGSSKTFLTIWNFVKG 293 (437)
T ss_dssp EEEEEEEECTTTCTTEEEEEEESTTEEEEEEETTTT
T ss_pred CceEEEEeccccCCCccEEEEEcCCCcEEEEEcCCC
Confidence 23466444 45679999999999999999865
No 91
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=99.89 E-value=1.6e-21 Score=114.16 Aligned_cols=111 Identities=22% Similarity=0.323 Sum_probs=94.7
Q ss_pred CeeEEEcCC--CCEEEEEcCCCcEEEEEcCCCC--CcEEEeeccCCeeEEEEccC--CCEEEEeeCCCcEEEeeCCCCCc
Q 045566 1 VLCSTWKDD--GTTVFSGGCDKQVKMWPLLSGG--QPVTVAMHDAPIKEVAWIPE--MNLLATGSWDKTLKYWDTRQPNP 74 (112)
Q Consensus 1 v~~~~~~~~--~~~l~~~~~~~~v~~~~~~~~~--~~~~~~~~~~~v~~~~~~~~--~~~~~~~~~~~~i~~w~~~~~~~ 74 (112)
|.+++|+++ +++|++++.|+.|++||+.+++ ....+..|...+.+++|+|+ +.++++++.|+.|++||+++...
T Consensus 58 v~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~ 137 (379)
T 3jrp_A 58 VWRVDWAHPKFGTILASCSYDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGT 137 (379)
T ss_dssp EEEEEECCGGGCSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSC
T ss_pred EEEEEeCCCCCCCEEEEeccCCEEEEEEcCCCceeEeeeecCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCc
Confidence 468999986 9999999999999999998876 55667778999999999998 99999999999999999987642
Q ss_pred e--E---EecCCCeEEEEee-------------CCCEEEEEeCCCcEEEEECcCC
Q 045566 75 V--H---TQQLPDRCYALTV-------------RYPLMVVGTADRNLVVFNLQNP 111 (112)
Q Consensus 75 ~--~---~~~~~~~~~~~~~-------------~~~~~~~~~~d~~v~~~d~~~~ 111 (112)
. . .+...+..+.|+| ++..+++++.|+.|++||++++
T Consensus 138 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~ 192 (379)
T 3jrp_A 138 TSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSD 192 (379)
T ss_dssp CCEEEEECCTTCEEEEEECCCC----------CTTCEEEEEETTSCEEEEEEETT
T ss_pred eeeEEecCCCCceEEEEEcCccccccccccCCCCCCEEEEEeCCCeEEEEEecCC
Confidence 2 2 2234567888998 6899999999999999998764
No 92
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=99.89 E-value=7.1e-22 Score=117.04 Aligned_cols=111 Identities=18% Similarity=0.270 Sum_probs=97.5
Q ss_pred CeeEEEcCCC-CEEEEEcCCC---cEEEEEcCCC-CCcEEEe-eccCCeeEEEEcc-CCCEEEEeeCCCcEEEeeCCCCC
Q 045566 1 VLCSTWKDDG-TTVFSGGCDK---QVKMWPLLSG-GQPVTVA-MHDAPIKEVAWIP-EMNLLATGSWDKTLKYWDTRQPN 73 (112)
Q Consensus 1 v~~~~~~~~~-~~l~~~~~~~---~v~~~~~~~~-~~~~~~~-~~~~~v~~~~~~~-~~~~~~~~~~~~~i~~w~~~~~~ 73 (112)
|.+++|+|++ .++++++.|+ .|++||+++. .....+. .|...+.+++|+| ++.++++++.|+.|++||+++.+
T Consensus 217 v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~~ 296 (416)
T 2pm9_A 217 LSVVEWHPKNSTRVATATGSDNDPSILIWDLRNANTPLQTLNQGHQKGILSLDWCHQDEHLLLSSGRDNTVLLWNPESAE 296 (416)
T ss_dssp EEEEEECSSCTTEEEEEECCSSSCCCCEEETTSTTSCSBCCCSCCSSCEEEEEECSSCSSCEEEEESSSEEEEECSSSCC
T ss_pred eEEEEECCCCCCEEEEEECCCCCceEEEEeCCCCCCCcEEeecCccCceeEEEeCCCCCCeEEEEeCCCCEEEeeCCCCc
Confidence 4689999987 6899999998 9999999886 4556666 7999999999999 99999999999999999999988
Q ss_pred ceEEecC---CCeEEEEeeCC-CEEEEEeCCCcEEEEECcCC
Q 045566 74 PVHTQQL---PDRCYALTVRY-PLMVVGTADRNLVVFNLQNP 111 (112)
Q Consensus 74 ~~~~~~~---~~~~~~~~~~~-~~~~~~~~d~~v~~~d~~~~ 111 (112)
.+..+.. .+..++|+|++ .++++++.|+.|++||++++
T Consensus 297 ~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~d~~i~iw~~~~~ 338 (416)
T 2pm9_A 297 QLSQFPARGNWCFKTKFAPEAPDLFACASFDNKIEVQTLQNL 338 (416)
T ss_dssp EEEEEECSSSCCCCEEECTTCTTEEEECCSSSEEEEEESCCC
T ss_pred cceeecCCCCceEEEEECCCCCCEEEEEecCCcEEEEEccCC
Confidence 7776643 46789999998 89999999999999999865
No 93
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=99.89 E-value=6.1e-22 Score=115.43 Aligned_cols=109 Identities=11% Similarity=0.186 Sum_probs=93.5
Q ss_pred CeeEEEcC-CCCEEEEEcCCCcEEEEEcCCCCCcEEE---eeccCCeeEEEEccCCCEEEEeeCCCcEEEeeCCCCCceE
Q 045566 1 VLCSTWKD-DGTTVFSGGCDKQVKMWPLLSGGQPVTV---AMHDAPIKEVAWIPEMNLLATGSWDKTLKYWDTRQPNPVH 76 (112)
Q Consensus 1 v~~~~~~~-~~~~l~~~~~~~~v~~~~~~~~~~~~~~---~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~ 76 (112)
|.+++|+| +++.+++++.|+.|++||+.+++....+ ..|...|.+++|+|++.++++++.|+.|++||+++.+...
T Consensus 118 i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~ 197 (366)
T 3k26_A 118 INELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRDEVLSADYDLLGEKIMSCGMDHSLKLWRINSKRMMN 197 (366)
T ss_dssp EEEEEECSSCTTEEEEEETTSCEEEEETTTTEEEEEECSTTSCSSCEEEEEECTTSSEEEEEETTSCEEEEESCSHHHHH
T ss_pred EEEEEECCCCCCEEEEEeCCCeEEEEEeecCeEEEEecccccccCceeEEEECCCCCEEEEecCCCCEEEEECCCCcccc
Confidence 57899999 8999999999999999999988887777 6789999999999999999999999999999998764321
Q ss_pred E-------------------------------ecCCCeEEEEeeCCCEEEEEeCCCcEEEEECcCC
Q 045566 77 T-------------------------------QQLPDRCYALTVRYPLMVVGTADRNLVVFNLQNP 111 (112)
Q Consensus 77 ~-------------------------------~~~~~~~~~~~~~~~~~~~~~~d~~v~~~d~~~~ 111 (112)
. +...+..+.|+ ++++++++.|+.|++||++++
T Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~~wd~~~~ 261 (366)
T 3k26_A 198 AIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWL--GDLILSKSCENAIVCWKPGKM 261 (366)
T ss_dssp HHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCEEEEE--TTEEEEECSSSEEEEEEESST
T ss_pred ccceeEEecCCCCcccccceeeccCccccccCCcceEEEEEEc--CCEEEEEecCCEEEEEeCCCc
Confidence 1 33345667776 789999999999999998765
No 94
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.88 E-value=1e-22 Score=124.64 Aligned_cols=110 Identities=16% Similarity=0.195 Sum_probs=93.4
Q ss_pred CeeE--EEcCCC-CEEEEEcCCCcEEEEEcCCCCCcEEEeeccC--CeeEEEEccCCCEEEEeeCCCcEEEeeCCCCCce
Q 045566 1 VLCS--TWKDDG-TTVFSGGCDKQVKMWPLLSGGQPVTVAMHDA--PIKEVAWIPEMNLLATGSWDKTLKYWDTRQPNPV 75 (112)
Q Consensus 1 v~~~--~~~~~~-~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~--~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~ 75 (112)
|.++ +|+|++ .+|++|+.|++|++||+++++....+.+|.. .+.+++|+|++..+++++.|+.|++||+++...+
T Consensus 311 V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~~~~~~~~~~~~~~~~v~~v~fsp~~~~l~s~~~d~tv~lwd~~~~~~~ 390 (524)
T 2j04_B 311 ILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKDIATTKTTVSRFRGSNLVPVVYCPQIYSYIYSDGASSLRAVPSRAAFAV 390 (524)
T ss_dssp EEEEEEECCTTSCCEEEEEETTSEEEEECGGGHHHHCEEEEECSCCSCCCEEEETTTTEEEEECSSSEEEEEETTCTTCC
T ss_pred EEEEEEEcCCCCCeEEEEeccCCeEEEEECCCCCcccccccccccCcccceEeCCCcCeEEEeCCCCcEEEEECcccccc
Confidence 4566 578887 8999999999999999988777767766653 4789999999999999999999999999987764
Q ss_pred EE---ecCCCeEEEEeeCCCEEEEEeCCCcEEEEECcC
Q 045566 76 HT---QQLPDRCYALTVRYPLMVVGTADRNLVVFNLQN 110 (112)
Q Consensus 76 ~~---~~~~~~~~~~~~~~~~~~~~~~d~~v~~~d~~~ 110 (112)
.. +...+..++|+|+++.+++|+.|+.|++||+..
T Consensus 391 ~~l~gH~~~V~sva~Sp~g~~l~Sgs~Dgtv~lwd~~~ 428 (524)
T 2j04_B 391 HPLVSRETTITAIGVSRLHPMVLAGSADGSLIITNAAR 428 (524)
T ss_dssp EEEEECSSCEEEEECCSSCCBCEEEETTTEEECCBSCS
T ss_pred eeeecCCCceEEEEeCCCCCeEEEEECCCEEEEEechH
Confidence 43 445678899999999999999999999999753
No 95
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=99.88 E-value=5.2e-22 Score=125.67 Aligned_cols=111 Identities=21% Similarity=0.274 Sum_probs=98.7
Q ss_pred CeeEEEcCCCCEEEEEcCCCcEEEEEcCCCCCcEEEeeccCCeeEEEEccCCCEEEEeeCCCcEEEeeCCCCC-ceEEe-
Q 045566 1 VLCSTWKDDGTTVFSGGCDKQVKMWPLLSGGQPVTVAMHDAPIKEVAWIPEMNLLATGSWDKTLKYWDTRQPN-PVHTQ- 78 (112)
Q Consensus 1 v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~-~~~~~- 78 (112)
|.+++|+|++++|++++.|+.|++|++.+++....+..|...|.+++|+|+++.+++++.|+.|++||+.+.. ....+
T Consensus 58 v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~ 137 (814)
T 3mkq_A 58 VRAGKFIARKNWIIVGSDDFRIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFE 137 (814)
T ss_dssp EEEEEEEGGGTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSEEEEEEGGGTSEEEEEEE
T ss_pred EEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEecCCCCEEEEEEeCCCCEEEEEcCCCEEEEEECCCCceEEEEEc
Confidence 4689999999999999999999999999999888899999999999999999999999999999999998763 33333
Q ss_pred --cCCCeEEEEee-CCCEEEEEeCCCcEEEEECcCC
Q 045566 79 --QLPDRCYALTV-RYPLMVVGTADRNLVVFNLQNP 111 (112)
Q Consensus 79 --~~~~~~~~~~~-~~~~~~~~~~d~~v~~~d~~~~ 111 (112)
...+..++|+| ++..+++++.|+.|++||++++
T Consensus 138 ~~~~~v~~~~~~p~~~~~l~~~~~dg~v~vwd~~~~ 173 (814)
T 3mkq_A 138 GHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQS 173 (814)
T ss_dssp CCSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCS
T ss_pred CCCCcEEEEEEEcCCCCEEEEEeCCCeEEEEECCCC
Confidence 34567889999 7889999999999999998765
No 96
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=99.88 E-value=1.1e-21 Score=114.11 Aligned_cols=111 Identities=23% Similarity=0.348 Sum_probs=93.3
Q ss_pred CeeEEEcCC---CCEEEEEcCCCcEEEEEcCCCC-CcEEEeeccCCeeEEEE------ccCCCEEEEeeCCCcEEEeeCC
Q 045566 1 VLCSTWKDD---GTTVFSGGCDKQVKMWPLLSGG-QPVTVAMHDAPIKEVAW------IPEMNLLATGSWDKTLKYWDTR 70 (112)
Q Consensus 1 v~~~~~~~~---~~~l~~~~~~~~v~~~~~~~~~-~~~~~~~~~~~v~~~~~------~~~~~~~~~~~~~~~i~~w~~~ 70 (112)
|.+++|+|+ ++++++++.|+.|++||+.+++ ....+..|...|.++.| +|++.++++++.|+.|++||++
T Consensus 68 v~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~~i~vwd~~ 147 (357)
T 3i2n_A 68 IKCGTFGATSLQQRYLATGDFGGNLHIWNLEAPEMPVYSVKGHKEIINAIDGIGGLGIGEGAPEIVTGSRDGTVKVWDPR 147 (357)
T ss_dssp EEEEECTTCCTTTCCEEEEETTSCEEEECTTSCSSCSEEECCCSSCEEEEEEESGGGCC-CCCEEEEEETTSCEEEECTT
T ss_pred EEEEEEcCCCCCCceEEEecCCCeEEEEeCCCCCccEEEEEecccceEEEeeccccccCCCccEEEEEeCCCeEEEEeCC
Confidence 468999998 6999999999999999999888 77888899999999955 6789999999999999999998
Q ss_pred CCC-ceEEecC-------CCeEEE----EeeCCCEEEEEeCCCcEEEEECcCC
Q 045566 71 QPN-PVHTQQL-------PDRCYA----LTVRYPLMVVGTADRNLVVFNLQNP 111 (112)
Q Consensus 71 ~~~-~~~~~~~-------~~~~~~----~~~~~~~~~~~~~d~~v~~~d~~~~ 111 (112)
+.+ .+..+.. .+..+. |++++.++++++.|+.|++||++++
T Consensus 148 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~ 200 (357)
T 3i2n_A 148 QKDDPVANMEPVQGENKRDCWTVAFGNAYNQEERVVCAGYDNGDIKLFDLRNM 200 (357)
T ss_dssp SCSSCSEEECCCTTSCCCCEEEEEEECCCC-CCCEEEEEETTSEEEEEETTTT
T ss_pred CCCCcceeccccCCCCCCceEEEEEEeccCCCCCEEEEEccCCeEEEEECccC
Confidence 876 5555532 334455 6689999999999999999999875
No 97
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=99.88 E-value=6.2e-21 Score=114.70 Aligned_cols=109 Identities=16% Similarity=0.321 Sum_probs=96.5
Q ss_pred CeeEEEcCCCCEEEEEcCCCcEEEEEcCCCCCcEEEeeccCCeeEEEEccCCCEEEEeeCCCcEEEeeCCCCCceEEec-
Q 045566 1 VLCSTWKDDGTTVFSGGCDKQVKMWPLLSGGQPVTVAMHDAPIKEVAWIPEMNLLATGSWDKTLKYWDTRQPNPVHTQQ- 79 (112)
Q Consensus 1 v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~- 79 (112)
|.+++|+|+++.+++|+.|+.|++||+.+++.+..+..|...+.++.|+ +.++++++.|+.|++||+++........
T Consensus 313 v~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~--~~~l~s~s~dg~v~vwd~~~~~~~~~~~~ 390 (464)
T 3v7d_B 313 IYSTIYDHERKRCISASMDTTIRIWDLENGELMYTLQGHTALVGLLRLS--DKFLVSAAADGSIRGWDANDYSRKFSYHH 390 (464)
T ss_dssp EEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEC--SSEEEEEETTSEEEEEETTTCCEEEEEEC
T ss_pred EEEEEEcCCCCEEEEEeCCCcEEEEECCCCcEEEEEeCCCCcEEEEEEc--CCEEEEEeCCCcEEEEECCCCceeeeecC
Confidence 4689999999999999999999999999999888999999999999997 5799999999999999999877665443
Q ss_pred -CCCeEEEEeeCCCEEEEEeCCCcEEEEECcCCC
Q 045566 80 -LPDRCYALTVRYPLMVVGTADRNLVVFNLQNPQ 112 (112)
Q Consensus 80 -~~~~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~ 112 (112)
......++++++.++++++ |+.|++||+++++
T Consensus 391 ~~~~~~~~~~~~~~~l~~~~-dg~i~iwd~~~g~ 423 (464)
T 3v7d_B 391 TNLSAITTFYVSDNILVSGS-ENQFNIYNLRSGK 423 (464)
T ss_dssp TTCCCEEEEEECSSEEEEEE-TTEEEEEETTTCC
T ss_pred CCCccEEEEEeCCCEEEEec-CCeEEEEECCCCc
Confidence 3456788999999999988 8999999998874
No 98
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.88 E-value=7.4e-22 Score=124.94 Aligned_cols=111 Identities=17% Similarity=0.304 Sum_probs=96.2
Q ss_pred CeeEEEcCCCCEEEEEcCCCcEEEEEcCC--CCCcEEEeeccCCeeEEEEccC--CCEEEEeeCCCcEEEeeCCCCC--c
Q 045566 1 VLCSTWKDDGTTVFSGGCDKQVKMWPLLS--GGQPVTVAMHDAPIKEVAWIPE--MNLLATGSWDKTLKYWDTRQPN--P 74 (112)
Q Consensus 1 v~~~~~~~~~~~l~~~~~~~~v~~~~~~~--~~~~~~~~~~~~~v~~~~~~~~--~~~~~~~~~~~~i~~w~~~~~~--~ 74 (112)
|++++|+|+++++++|+.||.|++|++.. .+....+.+|...|.+++|+|+ +..+++++.|+.|++||+.+++ .
T Consensus 12 V~~l~~s~dg~~latg~~dg~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I~vwd~~~~~~~~ 91 (753)
T 3jro_A 12 IHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEENGRWSQ 91 (753)
T ss_dssp EEEECCCSSSCCEEEEETTTEEEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEETTSCEEEEEEETTEEEE
T ss_pred eEEEEECCCCCeEEEEECCCcEEEEecCCCCCccceeccCCcCceEEEEecCCCCCCEEEEEeCCCeEEEEECCCCcccc
Confidence 57899999999999999999999999873 4455677889999999999987 9999999999999999998875 3
Q ss_pred eEEe---cCCCeEEEEeeC--CCEEEEEeCCCcEEEEECcCC
Q 045566 75 VHTQ---QLPDRCYALTVR--YPLMVVGTADRNLVVFNLQNP 111 (112)
Q Consensus 75 ~~~~---~~~~~~~~~~~~--~~~~~~~~~d~~v~~~d~~~~ 111 (112)
+... ...+..+.|+|+ +..+++++.|+.|++||++++
T Consensus 92 ~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~ 133 (753)
T 3jro_A 92 IAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKEN 133 (753)
T ss_dssp EEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSS
T ss_pred cccccCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecC
Confidence 3333 335678899998 999999999999999999875
No 99
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=99.88 E-value=3.5e-21 Score=112.59 Aligned_cols=109 Identities=19% Similarity=0.238 Sum_probs=95.0
Q ss_pred CeeEEEcCCCCEEEEEcCCCcEEEEEcC------------------CCCCcEEEeeccCCeeEEEEccCCCEEEEeeCCC
Q 045566 1 VLCSTWKDDGTTVFSGGCDKQVKMWPLL------------------SGGQPVTVAMHDAPIKEVAWIPEMNLLATGSWDK 62 (112)
Q Consensus 1 v~~~~~~~~~~~l~~~~~~~~v~~~~~~------------------~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~ 62 (112)
|.+++|+|+++++++++.|+.+++||+. .++....+..|...+.+++|+|++.++++++.|+
T Consensus 145 i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~ 224 (372)
T 1k8k_C 145 VLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDS 224 (372)
T ss_dssp EEEEEECTTSSEEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEEEETTT
T ss_pred eeEEEEcCCCCEEEEEcCCCCEEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEECCCCCEEEEEeCCC
Confidence 4689999999999999999999999954 4555666778899999999999999999999999
Q ss_pred cEEEeeCCCCCceEEecC---CCeEEEEeeCCCEEEEEeCCCcEEEEECcC
Q 045566 63 TLKYWDTRQPNPVHTQQL---PDRCYALTVRYPLMVVGTADRNLVVFNLQN 110 (112)
Q Consensus 63 ~i~~w~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~d~~v~~~d~~~ 110 (112)
.|++||+++.+.+..+.. .+..++|+|++.+++++ .|+.|++||+++
T Consensus 225 ~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~d~~i~i~~~~~ 274 (372)
T 1k8k_C 225 TVCLADADKKMAVATLASETLPLLAVTFITESSLVAAG-HDCFPVLFTYDS 274 (372)
T ss_dssp EEEEEEGGGTTEEEEEECSSCCEEEEEEEETTEEEEEE-TTSSCEEEEEET
T ss_pred EEEEEECCCCceeEEEccCCCCeEEEEEecCCCEEEEE-eCCeEEEEEccC
Confidence 999999998887766654 45788999999877777 999999999876
No 100
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=99.88 E-value=1.6e-21 Score=114.77 Aligned_cols=109 Identities=9% Similarity=0.070 Sum_probs=82.0
Q ss_pred eeEEEcCCCCEEEE--EcCCCcEEEEEcCCCCCcEEEeeccCCeeEEEEccCCCEEEEeeCCCcEEEeeCCCCCceE---
Q 045566 2 LCSTWKDDGTTVFS--GGCDKQVKMWPLLSGGQPVTVAMHDAPIKEVAWIPEMNLLATGSWDKTLKYWDTRQPNPVH--- 76 (112)
Q Consensus 2 ~~~~~~~~~~~l~~--~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~--- 76 (112)
.+++|+|+|+++++ ++.|+.|++||+.+++....+. |...|.+++|+|+++++++++.++ +.+|+..+++.+.
T Consensus 137 ~~v~fSpDg~~la~as~~~d~~i~iwd~~~~~~~~~~~-~~~~V~~v~fspdg~~l~s~s~~~-~~~~~~~~~~~~~~~~ 214 (365)
T 4h5i_A 137 KLVYISREGTVAAIASSKVPAIMRIIDPSDLTEKFEIE-TRGEVKDLHFSTDGKVVAYITGSS-LEVISTVTGSCIARKT 214 (365)
T ss_dssp EEEEECTTSSCEEEEESCSSCEEEEEETTTTEEEEEEE-CSSCCCEEEECTTSSEEEEECSSC-EEEEETTTCCEEEEEC
T ss_pred EEEEEcCCCCEEEEEECCCCCEEEEeECCCCcEEEEeC-CCCceEEEEEccCCceEEecccee-EEEEEeccCcceeeee
Confidence 47899999998765 4578999999999888776665 777899999999999998887655 4444443322100
Q ss_pred -------------------------------------------------Ee---cCCCeEEEEeeCCCEEEEEeCCCcEE
Q 045566 77 -------------------------------------------------TQ---QLPDRCYALTVRYPLMVVGTADRNLV 104 (112)
Q Consensus 77 -------------------------------------------------~~---~~~~~~~~~~~~~~~~~~~~~d~~v~ 104 (112)
.+ ...+.+++|+|++++|++|+.|+.|+
T Consensus 215 ~~~~~~~v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasgs~D~~V~ 294 (365)
T 4h5i_A 215 DFDKNWSLSKINFIADDTVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGELAVLASNDNSIA 294 (365)
T ss_dssp CCCTTEEEEEEEEEETTEEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECTTSCEEEEEETTSCEE
T ss_pred cCCCCCCEEEEEEcCCCCEEEEEecCCcceeEEeecccccceecceeeeeecCCCCCeEeEEECCCCCceEEEcCCCEEE
Confidence 00 01234678999999999999999999
Q ss_pred EEECcCCC
Q 045566 105 VFNLQNPQ 112 (112)
Q Consensus 105 ~~d~~~~~ 112 (112)
+||+++++
T Consensus 295 iwd~~~~~ 302 (365)
T 4h5i_A 295 LVKLKDLS 302 (365)
T ss_dssp EEETTTTE
T ss_pred EEECCCCc
Confidence 99998763
No 101
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=99.88 E-value=1e-21 Score=113.86 Aligned_cols=109 Identities=9% Similarity=0.031 Sum_probs=93.3
Q ss_pred CeeEEEcCCCCEEEEEcCCCcEEEEEcCCCC---CcEEEeeccCCeeEEEEccCCC-EEEEeeCCCcEEEeeC-CCCCce
Q 045566 1 VLCSTWKDDGTTVFSGGCDKQVKMWPLLSGG---QPVTVAMHDAPIKEVAWIPEMN-LLATGSWDKTLKYWDT-RQPNPV 75 (112)
Q Consensus 1 v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~---~~~~~~~~~~~v~~~~~~~~~~-~~~~~~~~~~i~~w~~-~~~~~~ 75 (112)
|.+++|+|++++|++++.|+.|++|++..++ ....+..|...|.+++|+|++. ++++++.|+.|++||+ .+.+..
T Consensus 14 v~~~~~s~~~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~ 93 (342)
T 1yfq_A 14 ISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEILKVDLIGSPSFQ 93 (342)
T ss_dssp EEEEEEEGGGTEEEEEETTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSEEEEEEETTSCEEEECSSSSSSEE
T ss_pred EEEEEEcCCCCEEEEEcCCCeEEEEEeCCCCccccceeeeecCCceEEEEECCCCCcEEEEEcCCCeEEEEEeccCCceE
Confidence 5789999999999999999999999998776 2445568899999999999999 9999999999999999 776543
Q ss_pred E--E--ecCCCeEEEEeeCCCEEEEEeCCCcEEEEECcC
Q 045566 76 H--T--QQLPDRCYALTVRYPLMVVGTADRNLVVFNLQN 110 (112)
Q Consensus 76 ~--~--~~~~~~~~~~~~~~~~~~~~~~d~~v~~~d~~~ 110 (112)
. . +...+..++|++ +..+++++.|+.|++||+++
T Consensus 94 ~~~~~~~~~~v~~l~~~~-~~~l~s~~~d~~i~iwd~~~ 131 (342)
T 1yfq_A 94 ALTNNEANLGICRICKYG-DDKLIAASWDGLIEVIDPRN 131 (342)
T ss_dssp ECBSCCCCSCEEEEEEET-TTEEEEEETTSEEEEECHHH
T ss_pred eccccCCCCceEEEEeCC-CCEEEEEcCCCeEEEEcccc
Confidence 2 2 333457888999 99999999999999999865
No 102
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.88 E-value=2.3e-21 Score=118.79 Aligned_cols=106 Identities=9% Similarity=0.174 Sum_probs=86.8
Q ss_pred CeeEEEcCCCCEEEEEcCCCcEEEEEcCCCCC-------cEEE----eeccCCeeEEEEccCCCEEEEeeCCCcEEEeeC
Q 045566 1 VLCSTWKDDGTTVFSGGCDKQVKMWPLLSGGQ-------PVTV----AMHDAPIKEVAWIPEMNLLATGSWDKTLKYWDT 69 (112)
Q Consensus 1 v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~-------~~~~----~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~ 69 (112)
|.+++|+|+|++|++|+.||+|++||+..+.. +.++ .+|...|.+++|+|++ +++++.|+.+++||+
T Consensus 132 v~svafSPDG~~LAsgs~DGtVkIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg--Laass~D~tVrlWd~ 209 (588)
T 2j04_A 132 YHCFEWNPIESSIVVGNEDGELQFFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV--LVAALSNNSVFSMTV 209 (588)
T ss_dssp EEEEEECSSSSCEEEEETTSEEEEEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE--EEEEETTCCEEEECC
T ss_pred EEEEEEcCCCCEEEEEcCCCEEEEEECCCCccccccceeeeeeecccccccccEEEEEEcCCc--EEEEeCCCeEEEEEC
Confidence 46899999999999999999999999987653 3455 4567899999999999 788889999999999
Q ss_pred CCCCce---EEe----cCCCeEEEEeeCCCEEEEEeCCCcEEEEECcCC
Q 045566 70 RQPNPV---HTQ----QLPDRCYALTVRYPLMVVGTADRNLVVFNLQNP 111 (112)
Q Consensus 70 ~~~~~~---~~~----~~~~~~~~~~~~~~~~~~~~~d~~v~~~d~~~~ 111 (112)
.+.+.. ..+ ...+..++|+ +..+++++ ++.|++||+.++
T Consensus 210 ~~~~~~~~~~tL~~~h~~~V~svaFs--g~~LASa~-~~tIkLWd~~~~ 255 (588)
T 2j04_A 210 SASSHQPVSRMIQNASRRKITDLKIV--DYKVVLTC-PGYVHKIDLKNY 255 (588)
T ss_dssp CSSSSCCCEEEEECCCSSCCCCEEEE--TTEEEEEC-SSEEEEEETTTT
T ss_pred CCCccccceeeecccccCcEEEEEEE--CCEEEEEe-CCeEEEEECCCC
Confidence 876632 222 3356788888 67888887 699999998865
No 103
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.88 E-value=2.1e-20 Score=111.88 Aligned_cols=111 Identities=23% Similarity=0.442 Sum_probs=93.2
Q ss_pred CeeEEEcCCCC-EEEEEcCCCcEEEEEcCCCCC-------cEEEeeccCCeeEEEEcc-CCCEEEEeeCCCcEEEeeCCC
Q 045566 1 VLCSTWKDDGT-TVFSGGCDKQVKMWPLLSGGQ-------PVTVAMHDAPIKEVAWIP-EMNLLATGSWDKTLKYWDTRQ 71 (112)
Q Consensus 1 v~~~~~~~~~~-~l~~~~~~~~v~~~~~~~~~~-------~~~~~~~~~~v~~~~~~~-~~~~~~~~~~~~~i~~w~~~~ 71 (112)
|.+++|+|++. +|++|+.|+.|++|++..... ...+..|...|.+++|+| ++..+++++.++.|++||+++
T Consensus 184 v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~ 263 (430)
T 2xyi_A 184 GYGLSWNPNLNGYLLSASDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRN 263 (430)
T ss_dssp CCCEEECTTSTTEEEEECTTSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTC
T ss_pred eEEEEeCCCCCCeEEEEeCCCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCC
Confidence 56899999888 999999999999999987432 345667899999999999 788999999999999999987
Q ss_pred C---CceEEe---cCCCeEEEEeeCCC-EEEEEeCCCcEEEEECcCC
Q 045566 72 P---NPVHTQ---QLPDRCYALTVRYP-LMVVGTADRNLVVFNLQNP 111 (112)
Q Consensus 72 ~---~~~~~~---~~~~~~~~~~~~~~-~~~~~~~d~~v~~~d~~~~ 111 (112)
. +.+..+ ...+.+++|+|++. .+++++.|+.|++||++++
T Consensus 264 ~~~~~~~~~~~~~~~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~ 310 (430)
T 2xyi_A 264 NNTSKPSHTVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNL 310 (430)
T ss_dssp SCSSSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCT
T ss_pred CCCCcceeEeecCCCCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCC
Confidence 6 344433 34567899999887 6889999999999999874
No 104
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.88 E-value=1.8e-22 Score=119.72 Aligned_cols=107 Identities=14% Similarity=0.136 Sum_probs=87.9
Q ss_pred EcCCCCEEEEEcCCCcEEEEEcCCCCCcE-----EEeeccCCeeEEEEcc--------CCCEEEEeeCCCcEEEeeCCCC
Q 045566 6 WKDDGTTVFSGGCDKQVKMWPLLSGGQPV-----TVAMHDAPIKEVAWIP--------EMNLLATGSWDKTLKYWDTRQP 72 (112)
Q Consensus 6 ~~~~~~~l~~~~~~~~v~~~~~~~~~~~~-----~~~~~~~~v~~~~~~~--------~~~~~~~~~~~~~i~~w~~~~~ 72 (112)
+.+++.++++++.|++|++||...++... .+.+|.+.|.+++|+| +++++++++.|++|++||+++.
T Consensus 97 ~~~~~~~las~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~~~~ 176 (393)
T 4gq1_A 97 SPVYSLFLACVCQDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRLTDE 176 (393)
T ss_dssp CCEEEEEEEEEETTSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEEETT
T ss_pred cCCCCCEEEEEeCCCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEECCCeEEEEECCCC
Confidence 34466789999999999999988765432 2467999999999997 7889999999999999999876
Q ss_pred CceEE---ecCCCeEEEEeeCCC-EEEEEeCCCcEEEEECcCCC
Q 045566 73 NPVHT---QQLPDRCYALTVRYP-LMVVGTADRNLVVFNLQNPQ 112 (112)
Q Consensus 73 ~~~~~---~~~~~~~~~~~~~~~-~~~~~~~d~~v~~~d~~~~~ 112 (112)
.++.. +...+..++|+|++. ++++++.|+.|++||+++++
T Consensus 177 ~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~ 220 (393)
T 4gq1_A 177 GPILAGYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNL 220 (393)
T ss_dssp EEEEEEEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC
T ss_pred ceeeeecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCc
Confidence 65433 344667899999874 79999999999999998763
No 105
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=99.88 E-value=2.2e-20 Score=107.28 Aligned_cols=108 Identities=20% Similarity=0.326 Sum_probs=92.0
Q ss_pred eeEEEcCCCCEEEEEcCCCcEEEEEcCCCCCcEEEe--eccCCeeEEEEccCCCEEEEeeCCCcEEEeeCCCCCceEEec
Q 045566 2 LCSTWKDDGTTVFSGGCDKQVKMWPLLSGGQPVTVA--MHDAPIKEVAWIPEMNLLATGSWDKTLKYWDTRQPNPVHTQQ 79 (112)
Q Consensus 2 ~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~ 79 (112)
++++|++++ .|++|. |++|++||+.+++....+. .|...|.+++|+|+++++++|+.|+.|++|++++++.+..+.
T Consensus 29 ~~l~WS~~~-~lAvg~-D~tV~iWd~~tg~~~~~~~~~~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~~~~~~~~ 106 (318)
T 4ggc_A 29 NLVDWSSGN-VLAVAL-DNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMT 106 (318)
T ss_dssp BCEEECTTS-EEEEEE-TTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEE
T ss_pred eEEEECCCC-EEEEEe-CCEEEEEECCCCCEEEEEEecCCCCeEEEEEECCCCCEEEEEECCCcEEEeecCCceeEEEec
Confidence 568999876 777665 8999999999998877664 577789999999999999999999999999999998887776
Q ss_pred CC-CeEEEEeeCCCEEEEEeCCCcEEEEECcCC
Q 045566 80 LP-DRCYALTVRYPLMVVGTADRNLVVFNLQNP 111 (112)
Q Consensus 80 ~~-~~~~~~~~~~~~~~~~~~d~~v~~~d~~~~ 111 (112)
.+ ....++.+++..+++++.++.+++|+....
T Consensus 107 ~h~~~~~~~~~~~~~l~s~~~~~~~~~~~~~~~ 139 (318)
T 4ggc_A 107 SHSARVGSLSWNSYILSSGSRSGHIHHHDVRVA 139 (318)
T ss_dssp CCSSCEEEEEEETTEEEEEETTSEEEEEETTSS
T ss_pred CccceEEEeecCCCEEEEEecCCceEeeecCCC
Confidence 54 355677888999999999999999987654
No 106
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=99.88 E-value=2.2e-20 Score=111.47 Aligned_cols=108 Identities=20% Similarity=0.327 Sum_probs=91.9
Q ss_pred eeEEEcCCCCEEEEEcCCCcEEEEEcCCCCCcEEEe--eccCCeeEEEEccCCCEEEEeeCCCcEEEeeCCCCCceEEec
Q 045566 2 LCSTWKDDGTTVFSGGCDKQVKMWPLLSGGQPVTVA--MHDAPIKEVAWIPEMNLLATGSWDKTLKYWDTRQPNPVHTQQ 79 (112)
Q Consensus 2 ~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~ 79 (112)
+.++|+++ +.|++|. |++|++||..+++....+. .|...|++++|+|++.++++|+.|+.|++||+++++.+..+.
T Consensus 109 ~~l~wS~~-n~lAvgl-d~tV~lWd~~tg~~~~~~~~~~~~~~V~sv~fspdg~~lasgs~Dg~v~iWd~~~~~~~~~~~ 186 (420)
T 4gga_A 109 NLVDWSSG-NVLAVAL-DNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMT 186 (420)
T ss_dssp BCEEECTT-SEEEEEE-TTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEEC
T ss_pred eeEEECCC-CEEEEEe-CCEEEEEECCCCCEEEEEEecCCCCcEEEEEECCCCCEEEEEECCCeEEEEEcCCCcEEEEEe
Confidence 56899975 5777775 8999999999988776554 567789999999999999999999999999999998887776
Q ss_pred CC-CeEEEEeeCCCEEEEEeCCCcEEEEECcCC
Q 045566 80 LP-DRCYALTVRYPLMVVGTADRNLVVFNLQNP 111 (112)
Q Consensus 80 ~~-~~~~~~~~~~~~~~~~~~d~~v~~~d~~~~ 111 (112)
.+ ....++.+++..+++++.|+.+++||.+..
T Consensus 187 ~h~~~v~~~s~~~~~l~sgs~d~~i~~~d~~~~ 219 (420)
T 4gga_A 187 SHSARVGSLSWNSYILSSGSRSGHIHHHDVRVA 219 (420)
T ss_dssp CCSSCEEEEEEETTEEEEEETTSEEEEEETTSS
T ss_pred CCCCceEEEeeCCCEEEEEeCCCceeEeeeccc
Confidence 54 355677788999999999999999998753
No 107
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=99.87 E-value=1.4e-20 Score=109.72 Aligned_cols=112 Identities=13% Similarity=0.253 Sum_probs=98.9
Q ss_pred CeeEEEcCCCCEEEEEcCCCcEEEEEcCC-CCCcEEEeeccCCeeEEEEccCCCEEEEeeCCCcEEEeeCCCCCceEEec
Q 045566 1 VLCSTWKDDGTTVFSGGCDKQVKMWPLLS-GGQPVTVAMHDAPIKEVAWIPEMNLLATGSWDKTLKYWDTRQPNPVHTQQ 79 (112)
Q Consensus 1 v~~~~~~~~~~~l~~~~~~~~v~~~~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~ 79 (112)
+.+++|+|+++.+++++.|+.|++||+.+ .+....+..|...+.+++|+|++.++++++.|+.|++||+++.+.+..+.
T Consensus 178 ~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~ 257 (369)
T 3zwl_B 178 ATVAGWSTKGKYIIAGHKDGKISKYDVSNNYEYVDSIDLHEKSISDMQFSPDLTYFITSSRDTNSFLVDVSTLQVLKKYE 257 (369)
T ss_dssp EEEEEECGGGCEEEEEETTSEEEEEETTTTTEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEE
T ss_pred eeEEEEcCCCCEEEEEcCCCEEEEEECCCCcEeEEEEecCCCceeEEEECCCCCEEEEecCCceEEEEECCCCceeeeec
Confidence 36789999999999999999999999988 56666778899999999999999999999999999999999988776664
Q ss_pred C--CCeEEEEeeCCCEEEEEeCCC--------------cEEEEECcCCC
Q 045566 80 L--PDRCYALTVRYPLMVVGTADR--------------NLVVFNLQNPQ 112 (112)
Q Consensus 80 ~--~~~~~~~~~~~~~~~~~~~d~--------------~v~~~d~~~~~ 112 (112)
. ....+.|+|++..+++++.++ .+++||+++++
T Consensus 258 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~ 306 (369)
T 3zwl_B 258 TDCPLNTAVITPLKEFIILGGGQEAKDVTTTSANEGKFEARFYHKIFEE 306 (369)
T ss_dssp CSSCEEEEEECSSSSEEEEEECCC-------------CEEEEEETTTCC
T ss_pred CCCCceeEEecCCCceEEEeecCCCceEEEEecCCCcceeEEEecCCCc
Confidence 3 457889999999999999988 79999987653
No 108
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=99.87 E-value=4e-21 Score=114.04 Aligned_cols=111 Identities=30% Similarity=0.501 Sum_probs=96.2
Q ss_pred CeeEEEcCCCCEEEEEcCCCcEEEEEcCCCCCcEEEeeccCCeeEEEEccCC-CEEEEee--CCCcEEEeeCCCCCceEE
Q 045566 1 VLCSTWKDDGTTVFSGGCDKQVKMWPLLSGGQPVTVAMHDAPIKEVAWIPEM-NLLATGS--WDKTLKYWDTRQPNPVHT 77 (112)
Q Consensus 1 v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~~~~~~--~~~~i~~w~~~~~~~~~~ 77 (112)
|.+++|+|+++++++++.|+.|++||+.+++....+..|...|.+++|+|++ ..+++++ .|+.|++||+++++.+..
T Consensus 220 v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~~~~~ 299 (401)
T 4aez_A 220 VCGLAWRSDGLQLASGGNDNVVQIWDARSSIPKFTKTNHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATGARVNT 299 (401)
T ss_dssp EEEEEECTTSSEEEEEETTSCEEEEETTCSSEEEEECCCSSCCCEEEECTTSTTEEEEECCTTTCEEEEEETTTCCEEEE
T ss_pred eeEEEEcCCCCEEEEEeCCCeEEEccCCCCCccEEecCCcceEEEEEECCCCCCEEEEecCCCCCEEEEEECCCCCEEEE
Confidence 4689999999999999999999999999988888888899999999999965 5666654 799999999999888776
Q ss_pred ecC--CCeEEEEeeCCCEEEEEe--CCCcEEEEECcCC
Q 045566 78 QQL--PDRCYALTVRYPLMVVGT--ADRNLVVFNLQNP 111 (112)
Q Consensus 78 ~~~--~~~~~~~~~~~~~~~~~~--~d~~v~~~d~~~~ 111 (112)
+.. .+..++|+++++.+++++ .|+.|++||++++
T Consensus 300 ~~~~~~v~~~~~s~~~~~l~~~~g~~dg~i~v~~~~~~ 337 (401)
T 4aez_A 300 VDAGSQVTSLIWSPHSKEIMSTHGFPDNNLSIWSYSSS 337 (401)
T ss_dssp EECSSCEEEEEECSSSSEEEEEECTTTCEEEEEEEETT
T ss_pred EeCCCcEEEEEECCCCCeEEEEeecCCCcEEEEecCCc
Confidence 644 457889999999999954 8999999998764
No 109
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.87 E-value=4.2e-21 Score=114.94 Aligned_cols=111 Identities=15% Similarity=0.211 Sum_probs=93.8
Q ss_pred CeeEEEcCC-CCEEEEEcCCCcEEEEEcCC----------CCCcEEEeeccCCeeEEEEccCCC-EEEEeeCCCcEEEee
Q 045566 1 VLCSTWKDD-GTTVFSGGCDKQVKMWPLLS----------GGQPVTVAMHDAPIKEVAWIPEMN-LLATGSWDKTLKYWD 68 (112)
Q Consensus 1 v~~~~~~~~-~~~l~~~~~~~~v~~~~~~~----------~~~~~~~~~~~~~v~~~~~~~~~~-~~~~~~~~~~i~~w~ 68 (112)
|++++|+|+ +.++++++.++.|++|++.. ......+..|...+.+++|+|++. ++++++.|+.|++|+
T Consensus 131 v~~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd 210 (430)
T 2xyi_A 131 VNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNLNGYLLSASDDHTICLWD 210 (430)
T ss_dssp CSEEEEETTEEEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEECTTSTTEEEEECTTSCEEEEE
T ss_pred EEEEEECCCCCcEEEEECCCCcEEEEECCCcccccCccccCCCcEEecCCCCCeEEEEeCCCCCCeEEEEeCCCeEEEEe
Confidence 578999997 67999999999999999976 566778889999999999999888 999999999999999
Q ss_pred CCCCCc-------eEE---ecCCCeEEEEee-CCCEEEEEeCCCcEEEEECcCC
Q 045566 69 TRQPNP-------VHT---QQLPDRCYALTV-RYPLMVVGTADRNLVVFNLQNP 111 (112)
Q Consensus 69 ~~~~~~-------~~~---~~~~~~~~~~~~-~~~~~~~~~~d~~v~~~d~~~~ 111 (112)
+..... ... +...+..++|+| ++..+++++.|+.|++||++++
T Consensus 211 ~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~ 264 (430)
T 2xyi_A 211 INATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNN 264 (430)
T ss_dssp TTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCS
T ss_pred CCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCC
Confidence 987322 122 233467889999 6778999999999999999875
No 110
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=99.87 E-value=1.1e-20 Score=116.34 Aligned_cols=110 Identities=12% Similarity=0.112 Sum_probs=98.5
Q ss_pred CeeEEEcCCCC-EEEEEcCCCcEEEEEcCCCCCcEEEeeccC---CeeEEEEccC-CCEEEEeeCCCcEEEeeCCCCCce
Q 045566 1 VLCSTWKDDGT-TVFSGGCDKQVKMWPLLSGGQPVTVAMHDA---PIKEVAWIPE-MNLLATGSWDKTLKYWDTRQPNPV 75 (112)
Q Consensus 1 v~~~~~~~~~~-~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~---~v~~~~~~~~-~~~~~~~~~~~~i~~w~~~~~~~~ 75 (112)
|.+++|+|+++ .+++++.|+.+++||..+.+....+..|.. .|.+++|+|+ +.++++++.|+.|++||+++++.+
T Consensus 163 v~~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~ 242 (615)
T 1pgu_A 163 INACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSGEFL 242 (615)
T ss_dssp EEEEEECSSSSCEEEEEETTTEEEEEETTTBEEEEEECSSSCTTCCEEEEEECSTTCCEEEEEETTCCEEEEETTTCCEE
T ss_pred EEEEEECCCCCcEEEEEeCCCcEEEEeCCCcceeeeecccCCCCceEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCEe
Confidence 46899999998 899999999999999998888888888888 9999999999 999999999999999999998877
Q ss_pred EEe-c------CCCeEEEEeeCCCEEEEEeCCCcEEEEECcCC
Q 045566 76 HTQ-Q------LPDRCYALTVRYPLMVVGTADRNLVVFNLQNP 111 (112)
Q Consensus 76 ~~~-~------~~~~~~~~~~~~~~~~~~~~d~~v~~~d~~~~ 111 (112)
..+ . ..+..+.|+ ++..+++++.|+.|++||++++
T Consensus 243 ~~~~~~~~~~~~~v~~~~~~-~~~~l~~~~~d~~i~~wd~~~~ 284 (615)
T 1pgu_A 243 KYIEDDQEPVQGGIFALSWL-DSQKFATVGADATIRVWDVTTS 284 (615)
T ss_dssp EECCBTTBCCCSCEEEEEES-SSSEEEEEETTSEEEEEETTTT
T ss_pred EEecccccccCCceEEEEEc-CCCEEEEEcCCCcEEEEECCCC
Confidence 766 2 234678888 9999999999999999999875
No 111
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=99.87 E-value=1.7e-20 Score=110.67 Aligned_cols=112 Identities=21% Similarity=0.399 Sum_probs=94.4
Q ss_pred CeeEEEcC-CCCEEEEEcCCCcEEEEEcCCCCCcEEEe-------------eccCCeeEEEEcc-CCCEEEEeeCCCcEE
Q 045566 1 VLCSTWKD-DGTTVFSGGCDKQVKMWPLLSGGQPVTVA-------------MHDAPIKEVAWIP-EMNLLATGSWDKTLK 65 (112)
Q Consensus 1 v~~~~~~~-~~~~l~~~~~~~~v~~~~~~~~~~~~~~~-------------~~~~~v~~~~~~~-~~~~~~~~~~~~~i~ 65 (112)
|.+++|+| ++++|++++.|+.|++|++.+++....+. .|...|.+++|+| ++.++++++.|+.|+
T Consensus 46 v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d~~i~ 125 (408)
T 4a11_B 46 INTLDIEPVEGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDTGMFTSSSFDKTLK 125 (408)
T ss_dssp EEEEEECTTTCCEEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCTTCEEEEETTSEEE
T ss_pred EEEEEEecCCCCEEEEEcCCCeEEEEECCCCcccceEeccccccccccccccCCCcEEEEEEccCCCcEEEEEeCCCeEE
Confidence 57899999 99999999999999999998876654432 4889999999999 788999999999999
Q ss_pred EeeCCCCCceEEecC--CCeEEEEeeC---CCEEEEEeCCCcEEEEECcCCC
Q 045566 66 YWDTRQPNPVHTQQL--PDRCYALTVR---YPLMVVGTADRNLVVFNLQNPQ 112 (112)
Q Consensus 66 ~w~~~~~~~~~~~~~--~~~~~~~~~~---~~~~~~~~~d~~v~~~d~~~~~ 112 (112)
+||+.+.+....+.. ....+.+.+. +..+++++.|+.|++||+++++
T Consensus 126 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~ 177 (408)
T 4a11_B 126 VWDTNTLQTADVFNFEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGS 177 (408)
T ss_dssp EEETTTTEEEEEEECSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSSSC
T ss_pred EeeCCCCccceeccCCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCcc
Confidence 999998877666544 4456777764 4599999999999999998763
No 112
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.87 E-value=1.6e-20 Score=109.42 Aligned_cols=110 Identities=52% Similarity=1.006 Sum_probs=98.5
Q ss_pred CeeEEEcCCCCEEEEEcCCCcEEEEEcCCCCCcEEEeeccCCeeEEEE--ccCCCEEEEeeCCCcEEEeeCCCCCceEEe
Q 045566 1 VLCSTWKDDGTTVFSGGCDKQVKMWPLLSGGQPVTVAMHDAPIKEVAW--IPEMNLLATGSWDKTLKYWDTRQPNPVHTQ 78 (112)
Q Consensus 1 v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~ 78 (112)
|.+++|+|++++|++++.|+.|++||+.+++... +..|...|.+++| ++++.++++++.|+.|++||+++.+.+..+
T Consensus 89 v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~-~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~ 167 (368)
T 3mmy_A 89 VLDVCWSDDGSKVFTASCDKTAKMWDLSSNQAIQ-IAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMMVL 167 (368)
T ss_dssp EEEEEECTTSSEEEEEETTSEEEEEETTTTEEEE-EEECSSCEEEEEEEECSSCEEEEEEETTSEEEEECSSCSSCSEEE
T ss_pred EEEEEECcCCCEEEEEcCCCcEEEEEcCCCCcee-eccccCceEEEEEEeCCCCCEEEEccCCCcEEEEECCCCcEEEEE
Confidence 5689999999999999999999999998776544 5679999999999 889999999999999999999999888888
Q ss_pred cCCCeEEEEeeCCCEEEEEeCCCcEEEEECcCC
Q 045566 79 QLPDRCYALTVRYPLMVVGTADRNLVVFNLQNP 111 (112)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~d~~v~~~d~~~~ 111 (112)
..+....++.+....+++++.++.+.+||++..
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 200 (368)
T 3mmy_A 168 QLPERCYCADVIYPMAVVATAERGLIVYQLENQ 200 (368)
T ss_dssp ECSSCEEEEEEETTEEEEEEGGGCEEEEECSSS
T ss_pred ecCCCceEEEecCCeeEEEeCCCcEEEEEeccc
Confidence 877777788888889999999999999998764
No 113
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=99.87 E-value=2.5e-20 Score=112.10 Aligned_cols=108 Identities=19% Similarity=0.226 Sum_probs=93.8
Q ss_pred EEcCCCCEEEEEcCCCcEEEEEcCCCCCcEEEeeccCCeeEEEEccCCCEEEEeeCCCcEEEeeCCCCCceEEecCCC-e
Q 045566 5 TWKDDGTTVFSGGCDKQVKMWPLLSGGQPVTVAMHDAPIKEVAWIPEMNLLATGSWDKTLKYWDTRQPNPVHTQQLPD-R 83 (112)
Q Consensus 5 ~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~-~ 83 (112)
+++++++.+++++.|+.|++||+.+++....+..|...+.+++|+|++..+++++.|+.|++||+++++.+..+..+. .
T Consensus 275 ~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~ 354 (464)
T 3v7d_B 275 TVSGHGNIVVSGSYDNTLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLENGELMYTLQGHTAL 354 (464)
T ss_dssp EEEEETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEECCCSSC
T ss_pred EEcCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCcEEEEEeCCCCc
Confidence 456788999999999999999999988888888999999999999999999999999999999999988887775533 2
Q ss_pred EEEEeeCCCEEEEEeCCCcEEEEECcCCC
Q 045566 84 CYALTVRYPLMVVGTADRNLVVFNLQNPQ 112 (112)
Q Consensus 84 ~~~~~~~~~~~~~~~~d~~v~~~d~~~~~ 112 (112)
..++..++.++++++.|+.|++||+++++
T Consensus 355 v~~~~~~~~~l~s~s~dg~v~vwd~~~~~ 383 (464)
T 3v7d_B 355 VGLLRLSDKFLVSAAADGSIRGWDANDYS 383 (464)
T ss_dssp EEEEEECSSEEEEEETTSEEEEEETTTCC
T ss_pred EEEEEEcCCEEEEEeCCCcEEEEECCCCc
Confidence 33344457899999999999999998753
No 114
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.86 E-value=2e-20 Score=118.44 Aligned_cols=111 Identities=22% Similarity=0.323 Sum_probs=94.6
Q ss_pred CeeEEEcCC--CCEEEEEcCCCcEEEEEcCCCC--CcEEEeeccCCeeEEEEccC--CCEEEEeeCCCcEEEeeCCCCCc
Q 045566 1 VLCSTWKDD--GTTVFSGGCDKQVKMWPLLSGG--QPVTVAMHDAPIKEVAWIPE--MNLLATGSWDKTLKYWDTRQPNP 74 (112)
Q Consensus 1 v~~~~~~~~--~~~l~~~~~~~~v~~~~~~~~~--~~~~~~~~~~~v~~~~~~~~--~~~~~~~~~~~~i~~w~~~~~~~ 74 (112)
|.+++|+|+ ++++++|+.||.|++||+.+++ ....+..|...|.+++|+|+ +..+++++.|+.|++||+++...
T Consensus 56 V~~l~~s~~~~~~~l~s~s~Dg~I~vwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~ 135 (753)
T 3jro_A 56 VWRVDWAHPKFGTILASCSYDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGT 135 (753)
T ss_dssp EEEEEECCTTSCSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSC
T ss_pred eEEEEecCCCCCCEEEEEeCCCeEEEEECCCCcccccccccCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCC
Confidence 578999987 9999999999999999998876 55667789999999999998 99999999999999999987632
Q ss_pred e--E---EecCCCeEEEEee-------------CCCEEEEEeCCCcEEEEECcCC
Q 045566 75 V--H---TQQLPDRCYALTV-------------RYPLMVVGTADRNLVVFNLQNP 111 (112)
Q Consensus 75 ~--~---~~~~~~~~~~~~~-------------~~~~~~~~~~d~~v~~~d~~~~ 111 (112)
. . .+...+..+.|+| ++..+++++.||.|++||++++
T Consensus 136 ~~~~~~~~~~~~v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~ 190 (753)
T 3jro_A 136 TSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSD 190 (753)
T ss_dssp CCCEEEECCSSCEEEEEECCCC---------CGGGCCEEEEETTSCEEEEEEETT
T ss_pred cceeEeecCCCceEEEEecCcccccccccccCCCCCEEEEEECCCeEEEEeccCC
Confidence 2 2 2234567888888 5889999999999999998865
No 115
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=99.86 E-value=5.6e-20 Score=106.57 Aligned_cols=109 Identities=17% Similarity=0.166 Sum_probs=91.2
Q ss_pred CeeEEEcCCCCEEEEEcCCCcEEEEEcCC-CCCc--EEEeeccCCeeEEEEcc-CCCEEEEeeCCCcEEEeeCCCC----
Q 045566 1 VLCSTWKDDGTTVFSGGCDKQVKMWPLLS-GGQP--VTVAMHDAPIKEVAWIP-EMNLLATGSWDKTLKYWDTRQP---- 72 (112)
Q Consensus 1 v~~~~~~~~~~~l~~~~~~~~v~~~~~~~-~~~~--~~~~~~~~~v~~~~~~~-~~~~~~~~~~~~~i~~w~~~~~---- 72 (112)
|.+++|+|++ +++++.++.|++||++. .... .....+...+.+++|+| ++..+++++.++.+++|+++..
T Consensus 153 v~~~~~~~~~--l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~ 230 (342)
T 1yfq_A 153 IFTMDTNSSR--LIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDY 230 (342)
T ss_dssp EEEEEECSSE--EEEEESTTEEEEEESSCCTTCCCEEEECSCSSCEEEEEECSGGGCEEEEEETTSEEEEEECCTTCCST
T ss_pred eEEEEecCCc--EEEEeCCCeEEEEECCccccccceeeecCCCCceeEEEECCCCCCEEEEEecCCcEEEEEEcCCCccc
Confidence 4678999877 89999999999999987 5432 23446788999999999 9999999999999999999776
Q ss_pred --CceEEecC------------CCeEEEEeeCCCEEEEEeCCCcEEEEECcCC
Q 045566 73 --NPVHTQQL------------PDRCYALTVRYPLMVVGTADRNLVVFNLQNP 111 (112)
Q Consensus 73 --~~~~~~~~------------~~~~~~~~~~~~~~~~~~~d~~v~~~d~~~~ 111 (112)
+....+.. .+..++|+|+++++++++.|+.|++||++++
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~vwd~~~~ 283 (342)
T 1yfq_A 231 NSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTR 283 (342)
T ss_dssp TCTTCEEEECCCCCTTCCSSCCCEEEEEECTTTCCEEEEETTSCEEEEETTTT
T ss_pred ccccceeeecccccccccccceeEEEEEEcCCCCEEEEecCCceEEEEcCccH
Confidence 54444432 4568899999999999999999999999875
No 116
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=99.86 E-value=6.3e-20 Score=109.51 Aligned_cols=109 Identities=17% Similarity=0.264 Sum_probs=94.8
Q ss_pred CeeEEEcCCCCEEEEEcCCCcEEEEEcCCCCCcEEEeeccCCeeEEEEccCCCEEEEeeCCCcEEEeeCCCCCc-eEEe-
Q 045566 1 VLCSTWKDDGTTVFSGGCDKQVKMWPLLSGGQPVTVAMHDAPIKEVAWIPEMNLLATGSWDKTLKYWDTRQPNP-VHTQ- 78 (112)
Q Consensus 1 v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~-~~~~- 78 (112)
|++++|+|+|++|++|+.|+.|++||+.+++.+..+.+|...+.++.++ +..+++++.|+.+.+||.+.... +..+
T Consensus 150 V~sv~fspdg~~lasgs~Dg~v~iWd~~~~~~~~~~~~h~~~v~~~s~~--~~~l~sgs~d~~i~~~d~~~~~~~~~~~~ 227 (420)
T 4gga_A 150 ISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVGSLSWN--SYILSSGSRSGHIHHHDVRVAEHHVATLS 227 (420)
T ss_dssp EEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEE--TTEEEEEETTSEEEEEETTSSSCEEEEEE
T ss_pred EEEEEECCCCCEEEEEECCCeEEEEEcCCCcEEEEEeCCCCceEEEeeC--CCEEEEEeCCCceeEeeecccceeeEEec
Confidence 5799999999999999999999999999999988999999999988775 67999999999999999887543 3333
Q ss_pred --cCCCeEEEEeeCCCEEEEEeCCCcEEEEECcCC
Q 045566 79 --QLPDRCYALTVRYPLMVVGTADRNLVVFNLQNP 111 (112)
Q Consensus 79 --~~~~~~~~~~~~~~~~~~~~~d~~v~~~d~~~~ 111 (112)
......+.+.+++..+++++.|+.+++||.+++
T Consensus 228 ~h~~~~~~~~~~~~g~~l~s~~~D~~v~i~~~~~~ 262 (420)
T 4gga_A 228 GHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPG 262 (420)
T ss_dssp CCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCC
T ss_pred ccccceeeeeecCCCCeeeeeeccccceEEeeccc
Confidence 334567888999999999999999999998765
No 117
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=99.85 E-value=2.1e-19 Score=107.60 Aligned_cols=105 Identities=21% Similarity=0.347 Sum_probs=90.5
Q ss_pred EEcCCCCEEEEEcCCCcEEEEEcCCCCCcEEEeeccCCeeEEEEccCCCEEEEeeCCCcEEEeeCCCCCceEEecCCC-e
Q 045566 5 TWKDDGTTVFSGGCDKQVKMWPLLSGGQPVTVAMHDAPIKEVAWIPEMNLLATGSWDKTLKYWDTRQPNPVHTQQLPD-R 83 (112)
Q Consensus 5 ~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~-~ 83 (112)
++.++++++++|+.|+.|++||..+++....+.+|...|.+++| ++..+++|+.|+.|++||+.+++.+..+..+. .
T Consensus 138 ~~~~d~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~--~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~ 215 (435)
T 1p22_A 138 CLQYDDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQY--DERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEA 215 (435)
T ss_dssp EEECCSSEEEEEESSSCEEEEESSSCCEEEEECCCSSCEEEEEC--CSSEEEEEETTSCEEEEESSSCCEEEEECCCCSC
T ss_pred EEEECCCEEEEEeCCCeEEEEeCCCCeEEEEEcCCCCcEEEEEE--CCCEEEEEcCCCeEEEEECCCCcEEEEEcCCCCc
Confidence 45558999999999999999999999988899999999999998 78899999999999999999998887775433 3
Q ss_pred EEEEeeCCCEEEEEeCCCcEEEEECcCC
Q 045566 84 CYALTVRYPLMVVGTADRNLVVFNLQNP 111 (112)
Q Consensus 84 ~~~~~~~~~~~~~~~~d~~v~~~d~~~~ 111 (112)
..++..++..+++++.|+.|++||++++
T Consensus 216 v~~l~~~~~~l~s~s~dg~i~vwd~~~~ 243 (435)
T 1p22_A 216 VLHLRFNNGMMVTCSKDRSIAVWDMASP 243 (435)
T ss_dssp EEEEECCTTEEEEEETTSCEEEEECSSS
T ss_pred EEEEEEcCCEEEEeeCCCcEEEEeCCCC
Confidence 3444456779999999999999999865
No 118
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=99.84 E-value=2.1e-19 Score=102.94 Aligned_cols=107 Identities=19% Similarity=0.149 Sum_probs=88.6
Q ss_pred CeeEEEcCCCCEEEEEcCCCcEEEEEcCCCCCcEEEeeccCCeeEEEEccCCCEEEEeeCCCcEEEeeCCCC---CceEE
Q 045566 1 VLCSTWKDDGTTVFSGGCDKQVKMWPLLSGGQPVTVAMHDAPIKEVAWIPEMNLLATGSWDKTLKYWDTRQP---NPVHT 77 (112)
Q Consensus 1 v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~---~~~~~ 77 (112)
|.+++| |+++++++++.|+.|++||+.+++....+..|...+.+++|+|++.++++++.|+.+++|++... +.+..
T Consensus 21 v~~~~~-~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~ 99 (313)
T 3odt_A 21 VRDVVA-VDDSKVASVSRDGTVRLWSKDDQWLGTVVYTGQGFLNSVCYDSEKELLLFGGKDTMINGVPLFATSGEDPLYT 99 (313)
T ss_dssp EEEEEE-EETTEEEEEETTSEEEEEEESSSEEEEEEEECSSCEEEEEEETTTTEEEEEETTSCEEEEETTCCTTSCC-CE
T ss_pred cEEEEe-cCCCEEEEEEcCCcEEEEECCCCEEEEEeecCCccEEEEEECCCCCEEEEecCCCeEEEEEeeecCCCCcccc
Confidence 578999 89999999999999999999888777888889999999999999999999999999999998764 33333
Q ss_pred ecCC-CeEEEEeeCCCEEEEEeCCCcEEEEEC
Q 045566 78 QQLP-DRCYALTVRYPLMVVGTADRNLVVFNL 108 (112)
Q Consensus 78 ~~~~-~~~~~~~~~~~~~~~~~~d~~v~~~d~ 108 (112)
+..+ ....++.+++..+++++.|+.|++||.
T Consensus 100 ~~~~~~~i~~~~~~~~~l~~~~~d~~i~~~d~ 131 (313)
T 3odt_A 100 LIGHQGNVCSLSFQDGVVISGSWDKTAKVWKE 131 (313)
T ss_dssp ECCCSSCEEEEEEETTEEEEEETTSEEEEEET
T ss_pred hhhcccCEEEEEecCCEEEEEeCCCCEEEEcC
Confidence 3322 223334447889999999999999983
No 119
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=99.84 E-value=5e-19 Score=101.64 Aligned_cols=110 Identities=16% Similarity=0.278 Sum_probs=93.1
Q ss_pred CeeEEEcCCCCEEEEEcCCCcEEEEEcCCCCCcEEEeeccCCeeEEEEccCCCEEEEeeCCCcEEEeeCCCCCc-eEEe-
Q 045566 1 VLCSTWKDDGTTVFSGGCDKQVKMWPLLSGGQPVTVAMHDAPIKEVAWIPEMNLLATGSWDKTLKYWDTRQPNP-VHTQ- 78 (112)
Q Consensus 1 v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~-~~~~- 78 (112)
|.+++|+|+++++++|+.|+.|++|++.+++.+..+..|...+.++.+ ++..+++++.++.+.+|+...... +..+
T Consensus 70 V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~~~~~~~~~h~~~~~~~~~--~~~~l~s~~~~~~~~~~~~~~~~~~~~~~~ 147 (318)
T 4ggc_A 70 ISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVGSLSW--NSYILSSGSRSGHIHHHDVRVAEHHVATLS 147 (318)
T ss_dssp EEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEE--ETTEEEEEETTSEEEEEETTSSSCEEEEEE
T ss_pred EEEEEECCCCCEEEEEECCCcEEEeecCCceeEEEecCccceEEEeec--CCCEEEEEecCCceEeeecCCCceeEEEEc
Confidence 578999999999999999999999999999998888889888776555 567899999999999999877643 3333
Q ss_pred --cCCCeEEEEeeCCCEEEEEeCCCcEEEEECcCCC
Q 045566 79 --QLPDRCYALTVRYPLMVVGTADRNLVVFNLQNPQ 112 (112)
Q Consensus 79 --~~~~~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~ 112 (112)
........+.++++++++++.|+.|++||+++++
T Consensus 148 ~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~ 183 (318)
T 4ggc_A 148 GHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGE 183 (318)
T ss_dssp CCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCBT
T ss_pred CccCceEEEEEcCCCCEEEEEecCcceeEEECCCCc
Confidence 3345677888999999999999999999998753
No 120
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=99.83 E-value=1.1e-18 Score=104.71 Aligned_cols=106 Identities=23% Similarity=0.416 Sum_probs=77.4
Q ss_pred eeEEEcCCCCEEEEEcCCCcEEEEEcCCCCCcEEEeeccCCeeEEEEccCCCEEEEeeCCCcEEEeeCCCCCceEEecCC
Q 045566 2 LCSTWKDDGTTVFSGGCDKQVKMWPLLSGGQPVTVAMHDAPIKEVAWIPEMNLLATGSWDKTLKYWDTRQPNPVHTQQLP 81 (112)
Q Consensus 2 ~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~ 81 (112)
.+++| +++.+++++.|+.|++||+.+++....+..|...+.++.| ++..+++++.|+.|++||+++++.+..+..+
T Consensus 243 ~~~~~--~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~ 318 (445)
T 2ovr_B 243 RCVQY--DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGNCIHTLTGH 318 (445)
T ss_dssp EEEEE--CSSCEEEEETTSCEEEEEGGGTEEEEEECCCSSCEEEEEE--CSSEEEEEETTSCEEEEETTTCCEEEEECCC
T ss_pred EEEEE--CCCEEEEEcCCCEEEEEECCCCcEeEEecCCCCceEEEEE--CCCEEEEEeCCCeEEEEECCCCCEEEEEcCC
Confidence 35555 5677777777888888887777777777777777888777 6777888888888888888777776666543
Q ss_pred C-eEEEEeeCCCEEEEEeCCCcEEEEECcCC
Q 045566 82 D-RCYALTVRYPLMVVGTADRNLVVFNLQNP 111 (112)
Q Consensus 82 ~-~~~~~~~~~~~~~~~~~d~~v~~~d~~~~ 111 (112)
. ...++.+++..+++++.|+.|++||++++
T Consensus 319 ~~~v~~~~~~~~~l~~~~~dg~i~vwd~~~~ 349 (445)
T 2ovr_B 319 QSLTSGMELKDNILVSGNADSTVKIWDIKTG 349 (445)
T ss_dssp CSCEEEEEEETTEEEEEETTSCEEEEETTTC
T ss_pred cccEEEEEEeCCEEEEEeCCCeEEEEECCCC
Confidence 2 34455566778888888888888887765
No 121
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=99.83 E-value=6e-19 Score=105.65 Aligned_cols=105 Identities=19% Similarity=0.285 Sum_probs=90.0
Q ss_pred eeEEEcCCCCEEEEEcCCCcEEEEEcCCCCCcEEEeeccCCeeEEEEccCCCEEEEeeCCCcEEEeeCCCCCceEEecCC
Q 045566 2 LCSTWKDDGTTVFSGGCDKQVKMWPLLSGGQPVTVAMHDAPIKEVAWIPEMNLLATGSWDKTLKYWDTRQPNPVHTQQLP 81 (112)
Q Consensus 2 ~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~ 81 (112)
.+++| +++.+++|+.|+.|++||+.+++.+..+..|...+.++.++ +..+++++.|+.|++||+++++.+..+..+
T Consensus 260 ~~~~~--~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h 335 (435)
T 1p22_A 260 NVVDF--DDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYR--DRLVVSGSSDNTIRLWDIECGACLRVLEGH 335 (435)
T ss_dssp EEEEE--ETTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEEE--TTEEEEEETTSCEEEEETTTCCEEEEECCC
T ss_pred EEEEe--CCCEEEEEeCCCeEEEEECCcCcEEEEEcCCCCcEEEEEeC--CCEEEEEeCCCeEEEEECCCCCEEEEEeCC
Confidence 45666 78899999999999999999999988999999999999984 679999999999999999999888777653
Q ss_pred C-eEEEEeeCCCEEEEEeCCCcEEEEECcC
Q 045566 82 D-RCYALTVRYPLMVVGTADRNLVVFNLQN 110 (112)
Q Consensus 82 ~-~~~~~~~~~~~~~~~~~d~~v~~~d~~~ 110 (112)
. ...++..++..+++++.||.|++||+++
T Consensus 336 ~~~v~~~~~~~~~l~sg~~dg~i~vwd~~~ 365 (435)
T 1p22_A 336 EELVRCIRFDNKRIVSGAYDGKIKVWDLVA 365 (435)
T ss_dssp SSCEEEEECCSSEEEEEETTSCEEEEEHHH
T ss_pred cCcEEEEEecCCEEEEEeCCCcEEEEECCC
Confidence 3 3334445889999999999999999864
No 122
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.83 E-value=3.1e-19 Score=103.94 Aligned_cols=94 Identities=13% Similarity=0.141 Sum_probs=75.5
Q ss_pred CCCcEEEEEcCC-CCCcEEEeeccCCeeEEEEcc---CCCEEEEeeCCCcEEEeeCCCCCceEEecCC------CeEEEE
Q 045566 18 CDKQVKMWPLLS-GGQPVTVAMHDAPIKEVAWIP---EMNLLATGSWDKTLKYWDTRQPNPVHTQQLP------DRCYAL 87 (112)
Q Consensus 18 ~~~~v~~~~~~~-~~~~~~~~~~~~~v~~~~~~~---~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~------~~~~~~ 87 (112)
.|+.|++|++.. ++.+..+..|...+..++|++ ++..+++++.|++|++||+++++.++.+..+ +...+|
T Consensus 155 ~d~~V~~~~~s~dG~~~~s~~~~~~~v~~l~fs~~~g~~~~LaSgS~D~TIkIWDl~TGk~l~tL~g~~~~v~~v~~vaf 234 (356)
T 2w18_A 155 SDQQVEVMTFAEDGGGKENQFLMPPEETILTFAEVQGMQEALLGTTIMNNIVIWNLKTGQLLKKMHIDDSYQASVCHKAY 234 (356)
T ss_dssp TTCEEEEEEECTTSCEEEEEEECCCSSCEEEEEEEETSTTEEEEEETTSEEEEEETTTCCEEEEEECCC---CCCEEEEE
T ss_pred CCCcEEEEEECCCCceeeeeccCCCceeeEEeeccCCCCceEEEecCCCcEEEEECCCCcEEEEEcCCCcceeeeEEEEE
Confidence 388999999844 666677788888899999998 7799999999999999999999988887532 245689
Q ss_pred eeCCCEE------------EEEeCCCcEEEEECcCC
Q 045566 88 TVRYPLM------------VVGTADRNLVVFNLQNP 111 (112)
Q Consensus 88 ~~~~~~~------------~~~~~d~~v~~~d~~~~ 111 (112)
+|++..+ ++|+.|+++++||..++
T Consensus 235 SpdG~~lvs~s~~~~~w~laSGs~D~tIklWd~~tg 270 (356)
T 2w18_A 235 SEMGLLFIVLSHPCAKESESLRSPVFQLIVINPKTT 270 (356)
T ss_dssp EETTEEEEEEC------------CCEEEEEEETTTT
T ss_pred CCCCCEEEEeccCCCcceeeccCCCcEEEEEECCCC
Confidence 9998876 56788999999998875
No 123
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=99.83 E-value=2.6e-18 Score=103.04 Aligned_cols=107 Identities=21% Similarity=0.388 Sum_probs=90.7
Q ss_pred eeEEEcCCCCEEEEEcCCCcEEEEEcCCCCCcEEEeeccCCeeEEEEccCCCEEEEeeCCCcEEEeeCCCCCceEEecC-
Q 045566 2 LCSTWKDDGTTVFSGGCDKQVKMWPLLSGGQPVTVAMHDAPIKEVAWIPEMNLLATGSWDKTLKYWDTRQPNPVHTQQL- 80 (112)
Q Consensus 2 ~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~- 80 (112)
.+++| ++..+++++.|+.|++||+.+++....+..|...+.++.++ +..+++++.|+.|++||+++++.+..+..
T Consensus 283 ~~~~~--~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~ 358 (445)
T 2ovr_B 283 YSLQF--DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELK--DNILVSGNADSTVKIWDIKTGQCLQTLQGP 358 (445)
T ss_dssp EEEEE--CSSEEEEEETTSCEEEEETTTCCEEEEECCCCSCEEEEEEE--TTEEEEEETTSCEEEEETTTCCEEEEECST
T ss_pred EEEEE--CCCEEEEEeCCCeEEEEECCCCCEEEEEcCCcccEEEEEEe--CCEEEEEeCCCeEEEEECCCCcEEEEEccC
Confidence 46666 78999999999999999999999888888899999888774 67999999999999999999988877753
Q ss_pred ---CCeEEEEeeCCCEEEEEeCCCcEEEEECcCCC
Q 045566 81 ---PDRCYALTVRYPLMVVGTADRNLVVFNLQNPQ 112 (112)
Q Consensus 81 ---~~~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~ 112 (112)
.....++.+++.++++++.||.|++||+++++
T Consensus 359 ~~~~~~v~~~~~~~~~l~s~~~dg~v~iwd~~~~~ 393 (445)
T 2ovr_B 359 NKHQSAVTCLQFNKNFVITSSDDGTVKLWDLKTGE 393 (445)
T ss_dssp TSCSSCEEEEEECSSEEEEEETTSEEEEEETTTCC
T ss_pred CCCCCCEEEEEECCCEEEEEeCCCeEEEEECCCCc
Confidence 22344455568899999999999999998764
No 124
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.81 E-value=3e-18 Score=103.03 Aligned_cols=110 Identities=15% Similarity=0.160 Sum_probs=85.2
Q ss_pred CeeEEEcCC-CCEEEEEcCCCcEEEEEcCCCCCcEEEeeccCCeeEEEEccCCCEEEEeeCCCcEEEeeCCCCCceEEec
Q 045566 1 VLCSTWKDD-GTTVFSGGCDKQVKMWPLLSGGQPVTVAMHDAPIKEVAWIPEMNLLATGSWDKTLKYWDTRQPNPVHTQQ 79 (112)
Q Consensus 1 v~~~~~~~~-~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~ 79 (112)
|.+++|+|+ +..|++++.|+.|++||++++........|...+.+++|+|++.++++++.|+.|++||.+ .+....+.
T Consensus 152 V~~v~~~p~~~~~las~s~Dg~v~iwD~~~~~~~~~~~~~~~~v~~v~wspdg~~lasgs~dg~v~iwd~~-~~~~~~~~ 230 (434)
T 2oit_A 152 VIDMKWNPTVPSMVAVCLADGSIAVLQVTETVKVCATLPSTVAVTSVCWSPKGKQLAVGKQNGTVVQYLPT-LQEKKVIP 230 (434)
T ss_dssp EEEEEECSSCTTEEEEEETTSCEEEEEESSSEEEEEEECGGGCEEEEEECTTSSCEEEEETTSCEEEECTT-CCEEEEEC
T ss_pred eEEEEECCCCCCEEEEEECCCeEEEEEcCCCcceeeccCCCCceeEEEEcCCCCEEEEEcCCCcEEEEccC-Cccccccc
Confidence 468999997 8899999999999999998876555566788899999999999999999999999999998 44333332
Q ss_pred C----------CCeEEEEeeCCCEEEE-EeCCC------cEEEEECcCC
Q 045566 80 L----------PDRCYALTVRYPLMVV-GTADR------NLVVFNLQNP 111 (112)
Q Consensus 80 ~----------~~~~~~~~~~~~~~~~-~~~d~------~v~~~d~~~~ 111 (112)
. .+..+.|++++.++++ .+.+| .+++||+++.
T Consensus 231 ~~~~~~~~~~~~v~~v~w~~~~~~l~~~~~~dg~~~~~~~v~i~~l~~~ 279 (434)
T 2oit_A 231 CPPFYESDHPVRVLDVLWIGTYVFAIVYAAADGTLETSPDVVMALLPKK 279 (434)
T ss_dssp CCTTCCTTSCEEEEEEEEEETTEEEEEEEETTCCSSSCCEEEEEECCCT
T ss_pred CCcccCCCCceeEEEEEEecCceEEEEEccCCCccCCCCceEEEEeccC
Confidence 1 2346677777666544 33443 2889998754
No 125
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.80 E-value=5.2e-18 Score=100.06 Aligned_cols=110 Identities=20% Similarity=0.156 Sum_probs=89.7
Q ss_pred CeeEEEcCCCCEE-EEEcCCCcEEEEEcCCCCCcEEEeeccCCeeEEEEccCCCEEE-EeeCCCcEEEeeCCCCCceEEe
Q 045566 1 VLCSTWKDDGTTV-FSGGCDKQVKMWPLLSGGQPVTVAMHDAPIKEVAWIPEMNLLA-TGSWDKTLKYWDTRQPNPVHTQ 78 (112)
Q Consensus 1 v~~~~~~~~~~~l-~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~-~~~~~~~i~~w~~~~~~~~~~~ 78 (112)
+.+++|+|+++.+ ++++.++.|++||+.+++....+..+. .+.+++|+|+++.++ ++..++.|++||+.+++.+..+
T Consensus 34 ~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~~~~~~~~-~v~~~~~spdg~~l~~~~~~~~~v~v~d~~~~~~~~~~ 112 (391)
T 1l0q_A 34 PMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVPAGS-SPQGVAVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTV 112 (391)
T ss_dssp EEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEECSS-SEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEE
T ss_pred cceEEECCCCCEEEEECCCCCeEEEEECCCCeEEEEEECCC-CccceEECCCCCEEEEEECCCCEEEEEECCCCeEEEEE
Confidence 3588999999976 677789999999998888777666444 899999999999775 4556799999999988776655
Q ss_pred cC--CCeEEEEeeCCCEE-EEEeCCCcEEEEECcCC
Q 045566 79 QL--PDRCYALTVRYPLM-VVGTADRNLVVFNLQNP 111 (112)
Q Consensus 79 ~~--~~~~~~~~~~~~~~-~~~~~d~~v~~~d~~~~ 111 (112)
.. ....++|+++++.+ ++++.++.|++||++++
T Consensus 113 ~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~ 148 (391)
T 1l0q_A 113 KTGKSPLGLALSPDGKKLYVTNNGDKTVSVINTVTK 148 (391)
T ss_dssp ECSSSEEEEEECTTSSEEEEEETTTTEEEEEETTTT
T ss_pred eCCCCcceEEECCCCCEEEEEeCCCCEEEEEECCCC
Confidence 44 34678899999877 67777999999999875
No 126
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.80 E-value=4.3e-18 Score=101.53 Aligned_cols=111 Identities=12% Similarity=0.084 Sum_probs=94.7
Q ss_pred CeeEEEcCCCCEEEEEcCCCcEEEEEcCCCCCcEEEeeccCCeeEEEEccCCCEEE-EeeCCCcEEEeeCCCCCceEEec
Q 045566 1 VLCSTWKDDGTTVFSGGCDKQVKMWPLLSGGQPVTVAMHDAPIKEVAWIPEMNLLA-TGSWDKTLKYWDTRQPNPVHTQQ 79 (112)
Q Consensus 1 v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~-~~~~~~~i~~w~~~~~~~~~~~~ 79 (112)
|.+++|+|+++.+++++.|+.|++||+.+++....+..+...+.+++|+|++..++ ++..++.|++||+++++.+..+.
T Consensus 172 v~~~~~~~~~~~~~s~~~d~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~~~~ 251 (433)
T 3bws_A 172 VETISIPEHNELWVSQMQANAVHVFDLKTLAYKATVDLTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLEIRKTD 251 (433)
T ss_dssp EEEEEEGGGTEEEEEEGGGTEEEEEETTTCCEEEEEECSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTEEEEECC
T ss_pred eeEEEEcCCCEEEEEECCCCEEEEEECCCceEEEEEcCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcEEEEec
Confidence 35789999999999999999999999998888888888888999999999998775 55579999999999887766655
Q ss_pred CC--CeEEEEeeCCCEEEEEe--------CCCcEEEEECcCC
Q 045566 80 LP--DRCYALTVRYPLMVVGT--------ADRNLVVFNLQNP 111 (112)
Q Consensus 80 ~~--~~~~~~~~~~~~~~~~~--------~d~~v~~~d~~~~ 111 (112)
.. ...++++|+++.+++++ .|+.|++||++++
T Consensus 252 ~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~ 293 (433)
T 3bws_A 252 KIGLPRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDKE 293 (433)
T ss_dssp CCSEEEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTTT
T ss_pred CCCCceEEEEcCCCCEEEEEECCCCccccCCCeEEEEECCCC
Confidence 43 35788899999998887 4889999999865
No 127
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.78 E-value=4.8e-18 Score=101.34 Aligned_cols=110 Identities=9% Similarity=0.030 Sum_probs=91.6
Q ss_pred eeEEEcCCCCEEEEEcCCCcEEEEEcCCCCCcEE-----EeeccCCeeEEEEccCCCEEEEeeCCCcEEEeeCCCCCceE
Q 045566 2 LCSTWKDDGTTVFSGGCDKQVKMWPLLSGGQPVT-----VAMHDAPIKEVAWIPEMNLLATGSWDKTLKYWDTRQPNPVH 76 (112)
Q Consensus 2 ~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~-----~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~ 76 (112)
.+++|+|++..+++++.++.|++||+.+++.... +..|...+.+++|++++..+++++.++.|++||+++.+.+.
T Consensus 126 ~~~~~s~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~v~~~d~~~~~~~~ 205 (433)
T 3bws_A 126 KSVRFIDNTRLAIPLLEDEGMDVLDINSGQTVRLSPPEKYKKKLGFVETISIPEHNELWVSQMQANAVHVFDLKTLAYKA 205 (433)
T ss_dssp CCCEESSSSEEEEEBTTSSSEEEEETTTCCEEEECCCHHHHTTCCEEEEEEEGGGTEEEEEEGGGTEEEEEETTTCCEEE
T ss_pred eEEEEeCCCeEEEEeCCCCeEEEEECCCCeEeeecCcccccccCCceeEEEEcCCCEEEEEECCCCEEEEEECCCceEEE
Confidence 4688999777888888899999999988876653 23577789999999999999999999999999999888776
Q ss_pred EecC---CCeEEEEeeCCCEEEEEe-CCCcEEEEECcCC
Q 045566 77 TQQL---PDRCYALTVRYPLMVVGT-ADRNLVVFNLQNP 111 (112)
Q Consensus 77 ~~~~---~~~~~~~~~~~~~~~~~~-~d~~v~~~d~~~~ 111 (112)
.+.. ....++|+|+++.+++++ .++.|++||++++
T Consensus 206 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~ 244 (433)
T 3bws_A 206 TVDLTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTK 244 (433)
T ss_dssp EEECSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTT
T ss_pred EEcCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCC
Confidence 6643 346789999999886554 7899999999875
No 128
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.77 E-value=4.5e-17 Score=96.05 Aligned_cols=109 Identities=15% Similarity=0.096 Sum_probs=89.9
Q ss_pred eeEEEcCCCCEE-EEEcCCCcEEEEEcCCCCCcEEEeeccCCeeEEEEccCCCEE-EEeeCCCcEEEeeCCCCCceEEec
Q 045566 2 LCSTWKDDGTTV-FSGGCDKQVKMWPLLSGGQPVTVAMHDAPIKEVAWIPEMNLL-ATGSWDKTLKYWDTRQPNPVHTQQ 79 (112)
Q Consensus 2 ~~~~~~~~~~~l-~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~-~~~~~~~~i~~w~~~~~~~~~~~~ 79 (112)
.+++|+|+++.+ ++++.++.|++||+.+++....+..+ ..+.+++|+|+++.+ +++..++.|++||+++.+......
T Consensus 119 ~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~-~~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~ 197 (391)
T 1l0q_A 119 LGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINTVSVG-RSPKGIAVTPDGTKVYVANFDSMSISVIDTVTNSVIDTVK 197 (391)
T ss_dssp EEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECC-SSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEE
T ss_pred ceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEecC-CCcceEEECCCCCEEEEEeCCCCEEEEEECCCCeEEEEEe
Confidence 578999999977 68888999999999888776666644 556899999999877 677788999999999887766554
Q ss_pred CC--CeEEEEeeCCCEEEEEe---CCCcEEEEECcCC
Q 045566 80 LP--DRCYALTVRYPLMVVGT---ADRNLVVFNLQNP 111 (112)
Q Consensus 80 ~~--~~~~~~~~~~~~~~~~~---~d~~v~~~d~~~~ 111 (112)
.. ...++|+|+++.+++++ .++.|++||++++
T Consensus 198 ~~~~~~~~~~~~~g~~l~~~~~~~~~~~v~~~d~~~~ 234 (391)
T 1l0q_A 198 VEAAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTN 234 (391)
T ss_dssp CSSEEEEEEECTTSSEEEEEEECSSCCEEEEEETTTT
T ss_pred cCCCccceEECCCCCEEEEEecCcCCCcEEEEECCCC
Confidence 43 35778999999998888 6899999999875
No 129
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.74 E-value=5.1e-16 Score=92.86 Aligned_cols=110 Identities=14% Similarity=0.106 Sum_probs=85.0
Q ss_pred CeeEEEcCCCCEEEEEcCCC---cEEEEEcCCCCCcEEEeeccCCeeEEEEccCCCEEE-EeeCCCc--EEEeeCCCCCc
Q 045566 1 VLCSTWKDDGTTVFSGGCDK---QVKMWPLLSGGQPVTVAMHDAPIKEVAWIPEMNLLA-TGSWDKT--LKYWDTRQPNP 74 (112)
Q Consensus 1 v~~~~~~~~~~~l~~~~~~~---~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~-~~~~~~~--i~~w~~~~~~~ 74 (112)
|.+++|+|+|+.|+.++.++ .|++||+.+++.. .+..+...+.+++|+|+++.++ +++.++. |++||+.+++.
T Consensus 181 v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~~-~l~~~~~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~~ 259 (415)
T 2hqs_A 181 LMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVR-QVASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQI 259 (415)
T ss_dssp EEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEE-EEECCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCE
T ss_pred ceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCcEE-EeecCCCcccCEEEcCCCCEEEEEEecCCCceEEEEECCCCCE
Confidence 35789999999999998775 8999999877654 5666778899999999999777 6655554 99999988765
Q ss_pred eEEe--cCCCeEEEEeeCCCEEEEEeC-CC--cEEEEECcCC
Q 045566 75 VHTQ--QLPDRCYALTVRYPLMVVGTA-DR--NLVVFNLQNP 111 (112)
Q Consensus 75 ~~~~--~~~~~~~~~~~~~~~~~~~~~-d~--~v~~~d~~~~ 111 (112)
.... ......+.|+|+++.++.++. ++ .|.+||+.++
T Consensus 260 ~~l~~~~~~~~~~~~spdg~~l~~~s~~~g~~~i~~~d~~~~ 301 (415)
T 2hqs_A 260 RQVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGG 301 (415)
T ss_dssp EECCCCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSS
T ss_pred EeCcCCCCcccceEECCCCCEEEEEECCCCCcEEEEEECCCC
Confidence 3222 223467899999998888876 44 5777788765
No 130
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.69 E-value=1.6e-15 Score=93.44 Aligned_cols=107 Identities=9% Similarity=0.002 Sum_probs=90.1
Q ss_pred EEcCCCCEEEEEcCCCcEEEEEcCCCCCcEEEeeccCCeeEEEEccCCCEEEEeeCCCcEEEeeC--CCCCceEEecCC-
Q 045566 5 TWKDDGTTVFSGGCDKQVKMWPLLSGGQPVTVAMHDAPIKEVAWIPEMNLLATGSWDKTLKYWDT--RQPNPVHTQQLP- 81 (112)
Q Consensus 5 ~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~--~~~~~~~~~~~~- 81 (112)
.++|++..+++++.++.|.+||..+++.+.++..... +..++|+|+++++++++.++.|.+||+ .+.+.+..+...
T Consensus 144 ~~~p~~~~~vs~~~d~~V~v~D~~t~~~~~~i~~g~~-~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~~~~~~i~~g~ 222 (543)
T 1nir_A 144 DLDLPNLFSVTLRDAGQIALVDGDSKKIVKVIDTGYA-VHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIKIGI 222 (543)
T ss_dssp CCCGGGEEEEEEGGGTEEEEEETTTCCEEEEEECSTT-EEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEEEECCS
T ss_pred ccCCCCEEEEEEcCCCeEEEEECCCceEEEEEecCcc-cceEEECCCCCEEEEECCCCeEEEEECcCCCCcEEEEEecCC
Confidence 4778888899999999999999999988888773333 889999999999999999999999999 777766666543
Q ss_pred -CeEEEEee----CCCEEEEEeC-CCcEEEEECcCCC
Q 045566 82 -DRCYALTV----RYPLMVVGTA-DRNLVVFNLQNPQ 112 (112)
Q Consensus 82 -~~~~~~~~----~~~~~~~~~~-d~~v~~~d~~~~~ 112 (112)
...++|+| +++++++++. ++.|.+||..+++
T Consensus 223 ~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~ 259 (543)
T 1nir_A 223 EARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLE 259 (543)
T ss_dssp EEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCC
T ss_pred CcceEEeCCCcCCCCCEEEEEEccCCeEEEEeccccc
Confidence 36788999 9999999885 8999999987753
No 131
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.69 E-value=5.2e-15 Score=88.54 Aligned_cols=110 Identities=15% Similarity=0.125 Sum_probs=83.0
Q ss_pred eeEEEcCCCCEEE-EEcCCCc--EEEEEcCCCCCcEEEeeccCCeeEEEEccCCCEEEEeeC-CC--cEEEeeCCCCCce
Q 045566 2 LCSTWKDDGTTVF-SGGCDKQ--VKMWPLLSGGQPVTVAMHDAPIKEVAWIPEMNLLATGSW-DK--TLKYWDTRQPNPV 75 (112)
Q Consensus 2 ~~~~~~~~~~~l~-~~~~~~~--v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~-~~--~i~~w~~~~~~~~ 75 (112)
.+++|+|+|+.|+ +++.++. |.+||+.+++. ..+..+...+.+++|+|+++.++.++. ++ .|.+||+.+++..
T Consensus 226 ~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~~-~~l~~~~~~~~~~~~spdg~~l~~~s~~~g~~~i~~~d~~~~~~~ 304 (415)
T 2hqs_A 226 GAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQI-RQVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGAPQ 304 (415)
T ss_dssp EEEEECTTSSEEEEEECTTSSCEEEEEETTTCCE-EECCCCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCCE
T ss_pred cCEEEcCCCCEEEEEEecCCCceEEEEECCCCCE-EeCcCCCCcccceEECCCCCEEEEEECCCCCcEEEEEECCCCCEE
Confidence 5789999999887 6666554 89999887654 566677888999999999998887765 44 5777798876543
Q ss_pred EEec--CCCeEEEEeeCCCEEEEEeCC---CcEEEEECcCCC
Q 045566 76 HTQQ--LPDRCYALTVRYPLMVVGTAD---RNLVVFNLQNPQ 112 (112)
Q Consensus 76 ~~~~--~~~~~~~~~~~~~~~~~~~~d---~~v~~~d~~~~~ 112 (112)
.... .....+.|+|++++++.++.+ ..|.+||+.+++
T Consensus 305 ~l~~~~~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~~~ 346 (415)
T 2hqs_A 305 RITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGG 346 (415)
T ss_dssp ECCCSSSEEEEEEECTTSSEEEEEEECSSCEEEEEEETTTCC
T ss_pred EEecCCCcccCeEECCCCCEEEEEECcCCceEEEEEECCCCC
Confidence 2211 223568899999999888764 579999998763
No 132
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.68 E-value=1.5e-15 Score=95.86 Aligned_cols=109 Identities=18% Similarity=0.135 Sum_probs=85.9
Q ss_pred CeeEEEcCCCCEEEEEcC-CC-----cEEEEEcCCCCCcEEEeeccC------------------------CeeEEEEcc
Q 045566 1 VLCSTWKDDGTTVFSGGC-DK-----QVKMWPLLSGGQPVTVAMHDA------------------------PIKEVAWIP 50 (112)
Q Consensus 1 v~~~~~~~~~~~l~~~~~-~~-----~v~~~~~~~~~~~~~~~~~~~------------------------~v~~~~~~~ 50 (112)
+.+++|+|+|++|++++. |+ .|.+||+.+++....+..+.. .+..++|+|
T Consensus 39 ~~~~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Sp 118 (741)
T 2ecf_A 39 LMKPKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDYQWSP 118 (741)
T ss_dssp CEEEEECTTSSEEEEEECCSSCTTEEEEEEEETTTCCEEEEECGGGTC--------------------CCEESCCCEECT
T ss_pred CCCceEecCCCEEEEEeccCCCCcccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCcceeEECC
Confidence 467999999999999987 87 899999988876555543322 378999999
Q ss_pred CCCEEEEeeCCCcEEEeeCCCC---CceE--EecCCCeEEEEeeCCCEEEEEeCCCcEEEEECcCC
Q 045566 51 EMNLLATGSWDKTLKYWDTRQP---NPVH--TQQLPDRCYALTVRYPLMVVGTADRNLVVFNLQNP 111 (112)
Q Consensus 51 ~~~~~~~~~~~~~i~~w~~~~~---~~~~--~~~~~~~~~~~~~~~~~~~~~~~d~~v~~~d~~~~ 111 (112)
+|+.++.++. +.|.+||+.++ +... ........+.|+|+|+.++.++ ++.|++||+.++
T Consensus 119 Dg~~l~~~~~-~~i~~~d~~~~~~~~~~~l~~~~~~~~~~~~SPDG~~la~~~-~~~i~~~d~~~g 182 (741)
T 2ecf_A 119 DAQRLLFPLG-GELYLYDLKQEGKAAVRQLTHGEGFATDAKLSPKGGFVSFIR-GRNLWVIDLASG 182 (741)
T ss_dssp TSSEEEEEET-TEEEEEESSSCSTTSCCBCCCSSSCEEEEEECTTSSEEEEEE-TTEEEEEETTTT
T ss_pred CCCEEEEEeC-CcEEEEECCCCCcceEEEcccCCcccccccCCCCCCEEEEEe-CCcEEEEecCCC
Confidence 9999988876 89999999877 3322 2223456789999999998887 458999998765
No 133
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.66 E-value=2.3e-14 Score=83.37 Aligned_cols=110 Identities=8% Similarity=0.013 Sum_probs=87.8
Q ss_pred eeEEEcCCCCEEEEEcCCCcEEEEEcCCCCCcEEEee----ccCCeeEEEEccCCCEEEEee-CCCcEEEeeCCCCCceE
Q 045566 2 LCSTWKDDGTTVFSGGCDKQVKMWPLLSGGQPVTVAM----HDAPIKEVAWIPEMNLLATGS-WDKTLKYWDTRQPNPVH 76 (112)
Q Consensus 2 ~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~----~~~~v~~~~~~~~~~~~~~~~-~~~~i~~w~~~~~~~~~ 76 (112)
..++|+|+++.+++++.++.+.+||..+++....+.. +...+..++|+|+++.++.++ .++.+.+||..+.+.+.
T Consensus 188 ~~~~~s~dg~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~ 267 (353)
T 3vgz_A 188 TGLALDSEGKRLYTTNADGELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAFITDSKAAEVLVVDTRNGNILA 267 (353)
T ss_dssp CCCEEETTTTEEEEECTTSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEESSSSEEEEEETTTCCEEE
T ss_pred ceEEECCCCCEEEEEcCCCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEE
Confidence 4678999999999999999999999988877666543 345677899999998766555 45899999999888776
Q ss_pred EecCC-CeEEEEeeCCCEEEEEe-CCCcEEEEECcCC
Q 045566 77 TQQLP-DRCYALTVRYPLMVVGT-ADRNLVVFNLQNP 111 (112)
Q Consensus 77 ~~~~~-~~~~~~~~~~~~~~~~~-~d~~v~~~d~~~~ 111 (112)
.+... ...+.|+++++.+++++ .++.|.+||+.++
T Consensus 268 ~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~ 304 (353)
T 3vgz_A 268 KVAAPESLAVLFNPARNEAYVTHRQAGKVSVIDAKSY 304 (353)
T ss_dssp EEECSSCCCEEEETTTTEEEEEETTTTEEEEEETTTT
T ss_pred EEEcCCCceEEECCCCCEEEEEECCCCeEEEEECCCC
Confidence 65442 35688999999766665 6899999999875
No 134
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.65 E-value=4e-15 Score=93.94 Aligned_cols=98 Identities=9% Similarity=0.075 Sum_probs=77.5
Q ss_pred eeEEEcCCCCEEEEEcCCCcEEEEEcCCCC--CcEEEeeccCCeeEEEEccCCCEEEEeeCCCcEEEeeCCCCCceEEec
Q 045566 2 LCSTWKDDGTTVFSGGCDKQVKMWPLLSGG--QPVTVAMHDAPIKEVAWIPEMNLLATGSWDKTLKYWDTRQPNPVHTQQ 79 (112)
Q Consensus 2 ~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~--~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~ 79 (112)
.+++|+|+|++|++++. +.|.+||+.++. ....+..+...+..++|+|+|+.++.+. ++.|++||+.+++......
T Consensus 112 ~~~~~SpDg~~l~~~~~-~~i~~~d~~~~~~~~~~~l~~~~~~~~~~~~SPDG~~la~~~-~~~i~~~d~~~g~~~~~~~ 189 (741)
T 2ecf_A 112 VDYQWSPDAQRLLFPLG-GELYLYDLKQEGKAAVRQLTHGEGFATDAKLSPKGGFVSFIR-GRNLWVIDLASGRQMQLTA 189 (741)
T ss_dssp CCCEECTTSSEEEEEET-TEEEEEESSSCSTTSCCBCCCSSSCEEEEEECTTSSEEEEEE-TTEEEEEETTTTEEEECCC
T ss_pred ceeEECCCCCEEEEEeC-CcEEEEECCCCCcceEEEcccCCcccccccCCCCCCEEEEEe-CCcEEEEecCCCCEEEecc
Confidence 57899999999998886 899999998773 4445666778899999999999998886 4689999998765443322
Q ss_pred CC-------------------CeEEEEeeCCCEEEEEeCCC
Q 045566 80 LP-------------------DRCYALTVRYPLMVVGTADR 101 (112)
Q Consensus 80 ~~-------------------~~~~~~~~~~~~~~~~~~d~ 101 (112)
.. ...+.|+|+++.|+.++.|+
T Consensus 190 ~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~ 230 (741)
T 2ecf_A 190 DGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDE 230 (741)
T ss_dssp CCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEEC
T ss_pred CCccceeccccceeeeeccccccceEECCCCCEEEEEEEcC
Confidence 11 35689999999999987765
No 135
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.65 E-value=1.6e-14 Score=84.04 Aligned_cols=111 Identities=14% Similarity=0.009 Sum_probs=89.2
Q ss_pred eeEEEcCCCCEEEEEc--CCCcEEEEEcCCCCCcEEEeeccCCeeEEEEccCCCEEEEeeCCCcEEEeeCCCCCceEEec
Q 045566 2 LCSTWKDDGTTVFSGG--CDKQVKMWPLLSGGQPVTVAMHDAPIKEVAWIPEMNLLATGSWDKTLKYWDTRQPNPVHTQQ 79 (112)
Q Consensus 2 ~~~~~~~~~~~l~~~~--~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~ 79 (112)
.+++|+|+++.+++++ .++.|.+||..+++....+..+...+..+.|+|+++.++.+..++.+.+||..+.+......
T Consensus 144 ~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~i~~~d~~~~~~~~~~~ 223 (353)
T 3vgz_A 144 RELVADDATNTVYISGIGKESVIWVVDGGNIKLKTAIQNTGKMSTGLALDSEGKRLYTTNADGELITIDTADNKILSRKK 223 (353)
T ss_dssp EEEEEETTTTEEEEEEESSSCEEEEEETTTTEEEEEECCCCTTCCCCEEETTTTEEEEECTTSEEEEEETTTTEEEEEEE
T ss_pred ceEEECCCCCEEEEEecCCCceEEEEcCCCCceEEEecCCCCccceEEECCCCCEEEEEcCCCeEEEEECCCCeEEEEEE
Confidence 4589999999877765 47889999998887777766455567889999999999999999999999999887766554
Q ss_pred C-------CCeEEEEeeCCCEEEEEeC-CCcEEEEECcCCC
Q 045566 80 L-------PDRCYALTVRYPLMVVGTA-DRNLVVFNLQNPQ 112 (112)
Q Consensus 80 ~-------~~~~~~~~~~~~~~~~~~~-d~~v~~~d~~~~~ 112 (112)
. ....++++|+++.+++++. ++.|.+||+.+++
T Consensus 224 ~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~ 264 (353)
T 3vgz_A 224 LLDDGKEHFFINISLDTARQRAFITDSKAAEVLVVDTRNGN 264 (353)
T ss_dssp CCCSSSCCCEEEEEEETTTTEEEEEESSSSEEEEEETTTCC
T ss_pred cCCCCCCcccceEEECCCCCEEEEEeCCCCEEEEEECCCCc
Confidence 3 1235789999997777665 4899999998764
No 136
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.64 E-value=4.4e-15 Score=85.95 Aligned_cols=109 Identities=10% Similarity=0.075 Sum_probs=80.9
Q ss_pred CeeEEEcCCCCEEEEEcCC-CcEEEEEcC--CCCC--cEEEeeccCCeeEEEEccCCCEEEEee-CCCcEEEeeCC---C
Q 045566 1 VLCSTWKDDGTTVFSGGCD-KQVKMWPLL--SGGQ--PVTVAMHDAPIKEVAWIPEMNLLATGS-WDKTLKYWDTR---Q 71 (112)
Q Consensus 1 v~~~~~~~~~~~l~~~~~~-~~v~~~~~~--~~~~--~~~~~~~~~~v~~~~~~~~~~~~~~~~-~~~~i~~w~~~---~ 71 (112)
+.+++|+|+++++++++.+ +.+.+|++. +++. ...+.. ...+..++|+|+++.+++++ .++.|.+||+. .
T Consensus 40 ~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~ 118 (343)
T 1ri6_A 40 VQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESAL-PGSLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLP 118 (343)
T ss_dssp CCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEC-SSCCSEEEECTTSSEEEEEETTTTEEEEEEEETTEE
T ss_pred CceEEECCCCCEEEEeecCCCeEEEEEecCCCCceeecccccc-CCCCcEEEEcCCCCEEEEEecCCCeEEEEECCCCcc
Confidence 3578999999988888776 899999987 3442 223333 33788999999999776665 48889999994 2
Q ss_pred CCceEEecC--CCeEEEEeeCCCEEEEEe-CCCcEEEEECcC
Q 045566 72 PNPVHTQQL--PDRCYALTVRYPLMVVGT-ADRNLVVFNLQN 110 (112)
Q Consensus 72 ~~~~~~~~~--~~~~~~~~~~~~~~~~~~-~d~~v~~~d~~~ 110 (112)
.+....... ....++|+|+++.+++++ .++.|.+||+.+
T Consensus 119 ~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~ 160 (343)
T 1ri6_A 119 VGVVDVVEGLDGCHSANISPDNRTLWVPALKQDRICLFTVSD 160 (343)
T ss_dssp EEEEEEECCCTTBCCCEECTTSSEEEEEEGGGTEEEEEEECT
T ss_pred ccccccccCCCCceEEEECCCCCEEEEecCCCCEEEEEEecC
Confidence 233333332 346788999999888877 889999999876
No 137
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.64 E-value=2.5e-14 Score=88.22 Aligned_cols=109 Identities=14% Similarity=0.149 Sum_probs=87.5
Q ss_pred eeEEEcCCCCEEEEEcCCCcEEEEEc--CCCCCcEEEeeccCCeeEEEEcc----CCCEEEEee-CCCcEEEeeCCCCCc
Q 045566 2 LCSTWKDDGTTVFSGGCDKQVKMWPL--LSGGQPVTVAMHDAPIKEVAWIP----EMNLLATGS-WDKTLKYWDTRQPNP 74 (112)
Q Consensus 2 ~~~~~~~~~~~l~~~~~~~~v~~~~~--~~~~~~~~~~~~~~~v~~~~~~~----~~~~~~~~~-~~~~i~~w~~~~~~~ 74 (112)
..++|+|+|+++++++.++.|.+||+ .+.+.+.++. .......++|+| +++++++++ .++.|.+||..+.+.
T Consensus 182 ~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~~~~~~i~-~g~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~ 260 (543)
T 1nir_A 182 HISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIK-IGIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEP 260 (543)
T ss_dssp EEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEEEE-CCSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCE
T ss_pred ceEEECCCCCEEEEECCCCeEEEEECcCCCCcEEEEEe-cCCCcceEEeCCCcCCCCCEEEEEEccCCeEEEEecccccc
Confidence 56889999999999999999999999 6766666666 445678999999 999998887 489999999999887
Q ss_pred eEEecC--------------CCeEEEEeeCCCE-EEEEeCCCcEEEEECcCC
Q 045566 75 VHTQQL--------------PDRCYALTVRYPL-MVVGTADRNLVVFNLQNP 111 (112)
Q Consensus 75 ~~~~~~--------------~~~~~~~~~~~~~-~~~~~~d~~v~~~d~~~~ 111 (112)
+..+.. ....+.+++++.. +++...++.|.+||+.++
T Consensus 261 ~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~~g~i~vvd~~~~ 312 (543)
T 1nir_A 261 KQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDI 312 (543)
T ss_dssp EEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEECTTS
T ss_pred ceeecccCcccCccccccCCceEEEEECCCCCEEEEEECCCCeEEEEEecCC
Confidence 766543 2346778886654 556677899999998763
No 138
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.62 E-value=1.6e-15 Score=95.46 Aligned_cols=108 Identities=7% Similarity=0.052 Sum_probs=85.2
Q ss_pred eeEEEcCCCCEEEEEcCCCcEEEEEcCCCCCcEEEeeccC---CeeEEEEccCCCEEEEeeCC---------CcEEEeeC
Q 045566 2 LCSTWKDDGTTVFSGGCDKQVKMWPLLSGGQPVTVAMHDA---PIKEVAWIPEMNLLATGSWD---------KTLKYWDT 69 (112)
Q Consensus 2 ~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~---~v~~~~~~~~~~~~~~~~~~---------~~i~~w~~ 69 (112)
.+++|+|+|+++++ +.|+.+++||..+++....+..+.. .+.+++|+|+|++++++..+ +.+.+||+
T Consensus 20 ~~~~~spdg~~~~~-~~dg~i~~~d~~~g~~~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~ 98 (723)
T 1xfd_A 20 PEAKWISDTEFIYR-EQKGTVRLWNVETNTSTVLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKI 98 (723)
T ss_dssp CCCCBSSSSCBCCC-CSSSCEEEBCGGGCCCEEEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEES
T ss_pred cccEEcCCCcEEEE-eCCCCEEEEECCCCcEEEEeccccccccccceEEECCCCCEEEEEecCccceeecceeeEEEEEC
Confidence 46789999997766 7889999999998887766665544 48999999999999988764 67889999
Q ss_pred CCCCceEEe--cC---CCeEEEEeeCCCEEEEEeCCCcEEEEECcCC
Q 045566 70 RQPNPVHTQ--QL---PDRCYALTVRYPLMVVGTADRNLVVFNLQNP 111 (112)
Q Consensus 70 ~~~~~~~~~--~~---~~~~~~~~~~~~~~~~~~~d~~v~~~d~~~~ 111 (112)
.+++..... .. ......|+|+|+.++.++. +.|++||+.++
T Consensus 99 ~~~~~~~l~~~~~~~~~~~~~~~SPdG~~la~~~~-~~i~~~~~~~g 144 (723)
T 1xfd_A 99 PHGDPQSLDPPEVSNAKLQYAGWGPKGQQLIFIFE-NNIYYCAHVGK 144 (723)
T ss_dssp SSCCCEECCCTTCCSCCCSBCCBCSSTTCEEEEET-TEEEEESSSSS
T ss_pred CCCceEeccCCccccccccccEECCCCCEEEEEEC-CeEEEEECCCC
Confidence 887652111 11 1456889999999998876 78999998765
No 139
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.62 E-value=4.5e-15 Score=93.54 Aligned_cols=107 Identities=9% Similarity=0.102 Sum_probs=84.0
Q ss_pred eEEEcCCCCEEEEEcCCCcEEEEEcCCCCCcEEEeeccC---CeeEEEEccCCCEEEEeeC---------CCcEEEeeCC
Q 045566 3 CSTWKDDGTTVFSGGCDKQVKMWPLLSGGQPVTVAMHDA---PIKEVAWIPEMNLLATGSW---------DKTLKYWDTR 70 (112)
Q Consensus 3 ~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~---~v~~~~~~~~~~~~~~~~~---------~~~i~~w~~~ 70 (112)
+++|+|+++++++ +.|+.|++||..+++....+..+.. .+.+++|+|+|++++.++. ++.+++||+.
T Consensus 20 ~~~~s~dg~~~~~-~~d~~i~~~~~~~g~~~~~~~~~~~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~ 98 (719)
T 1z68_A 20 FPNWISGQEYLHQ-SADNNIVLYNIETGQSYTILSNRTMKSVNASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLS 98 (719)
T ss_dssp CCEESSSSEEEEE-CTTSCEEEEESSSCCEEEEECHHHHHTTTCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETT
T ss_pred ccEECCCCeEEEE-cCCCCEEEEEcCCCcEEEEEccccccccceeeEEECCCCCeEEEEecCceeEEeecceEEEEEECC
Confidence 5789999965554 4689999999988887655554433 4899999999999988766 6899999998
Q ss_pred CCCce--EEecCCCeEEEEeeCCCEEEEEeCCCcEEEEECcCC
Q 045566 71 QPNPV--HTQQLPDRCYALTVRYPLMVVGTADRNLVVFNLQNP 111 (112)
Q Consensus 71 ~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~d~~v~~~d~~~~ 111 (112)
+++.+ ..+........|+|+|+.++.+. ++.|++||+.++
T Consensus 99 ~g~~~~~~~l~~~~~~~~~SPDG~~la~~~-~~~i~~~~~~~g 140 (719)
T 1z68_A 99 NGEFVRGNELPRPIQYLCWSPVGSKLAYVY-QNNIYLKQRPGD 140 (719)
T ss_dssp TTEECCSSCCCSSBCCEEECSSTTCEEEEE-TTEEEEESSTTS
T ss_pred CCccccceecCcccccceECCCCCEEEEEE-CCeEEEEeCCCC
Confidence 87652 22334567789999999998885 779999998765
No 140
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.62 E-value=8.4e-14 Score=80.55 Aligned_cols=108 Identities=9% Similarity=0.047 Sum_probs=82.7
Q ss_pred eEEEcCCCCEEEEEcC-CCcEEEEEcCCCCC-cEEEeeccCCeeEEEEccCCCEEEEeeCCC---cEEEeeCCCCCceEE
Q 045566 3 CSTWKDDGTTVFSGGC-DKQVKMWPLLSGGQ-PVTVAMHDAPIKEVAWIPEMNLLATGSWDK---TLKYWDTRQPNPVHT 77 (112)
Q Consensus 3 ~~~~~~~~~~l~~~~~-~~~v~~~~~~~~~~-~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~---~i~~w~~~~~~~~~~ 77 (112)
.++|+|+++++++++. ++.|.+||..+++. ...+..+..+..+++|+|++++++++..++ .|.+||+.+.+.+..
T Consensus 44 ~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~~~~~~ 123 (331)
T 3u4y_A 44 DTAITSDCSNVVVTSDFCQTLVQIETQLEPPKVVAIQEGQSSMADVDITPDDQFAVTVTGLNHPFNMQSYSFLKNKFIST 123 (331)
T ss_dssp EEEECSSSCEEEEEESTTCEEEEEECSSSSCEEEEEEECSSCCCCEEECTTSSEEEECCCSSSSCEEEEEETTTTEEEEE
T ss_pred eEEEcCCCCEEEEEeCCCCeEEEEECCCCceeEEecccCCCCccceEECCCCCEEEEecCCCCcccEEEEECCCCCeEEE
Confidence 6789999997666554 88999999988887 566666666655599999999888655553 899999998877666
Q ss_pred ecC--CCeEEEEeeCCCEEEEE-eCCCc-EEEEECcC
Q 045566 78 QQL--PDRCYALTVRYPLMVVG-TADRN-LVVFNLQN 110 (112)
Q Consensus 78 ~~~--~~~~~~~~~~~~~~~~~-~~d~~-v~~~d~~~ 110 (112)
+.. ....++|+|++++++++ ..++. +.+|++..
T Consensus 124 ~~~~~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~ 160 (331)
T 3u4y_A 124 IPIPYDAVGIAISPNGNGLILIDRSSANTVRRFKIDA 160 (331)
T ss_dssp EECCTTEEEEEECTTSSCEEEEEETTTTEEEEEEECT
T ss_pred EECCCCccceEECCCCCEEEEEecCCCceEEEEEECC
Confidence 544 33678999999866555 55578 99999764
No 141
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.61 E-value=5.8e-14 Score=79.54 Aligned_cols=110 Identities=13% Similarity=0.190 Sum_probs=82.3
Q ss_pred eeEEEcCCCCEEE-EEcCCCcEEEEEcCC-CCCcEEEeeccCCeeEEEEccCCCEEEEee-CCCcEEEeeCC-CCCceEE
Q 045566 2 LCSTWKDDGTTVF-SGGCDKQVKMWPLLS-GGQPVTVAMHDAPIKEVAWIPEMNLLATGS-WDKTLKYWDTR-QPNPVHT 77 (112)
Q Consensus 2 ~~~~~~~~~~~l~-~~~~~~~v~~~~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~-~~~~i~~w~~~-~~~~~~~ 77 (112)
..++|+|+++.++ ++..++.+.+|++.. ......+..+...+.++.|+|+++.++.++ .++.+.+|++. .......
T Consensus 132 ~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~~~~~~ 211 (297)
T 2ojh_A 132 YWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSGVETRLTHGEGRNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDGSSVER 211 (297)
T ss_dssp EEEEECTTSSEEEEEEEETTEEEEEEEETTTCCEEECCCSSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCEEE
T ss_pred cceEECCCCCEEEEEECCCCceEEEEEECCCCcceEcccCCCccccceECCCCCEEEEEecCCCCccEEEECCCCCCcEE
Confidence 4678999999877 677889999998643 334455566778899999999999877665 58899999875 3344444
Q ss_pred ecCC---CeEEEEeeCCCEEEEEeCC-----------CcEEEEECcCC
Q 045566 78 QQLP---DRCYALTVRYPLMVVGTAD-----------RNLVVFNLQNP 111 (112)
Q Consensus 78 ~~~~---~~~~~~~~~~~~~~~~~~d-----------~~v~~~d~~~~ 111 (112)
+... ...+.|+|++++++.++.+ +.|.+||+.++
T Consensus 212 ~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~l~~~d~~~~ 259 (297)
T 2ojh_A 212 ITDSAYGDWFPHPSPSGDKVVFVSYDADVFDHPRDLDVRVQLMDMDGG 259 (297)
T ss_dssp CCCCSEEEEEEEECTTSSEEEEEEEETTCCSCCSSEEEEEEEEETTSC
T ss_pred EecCCcccCCeEECCCCCEEEEEEcCCCCCcccccCceEEEEEecCCC
Confidence 4332 3467899999998888765 56999998765
No 142
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.61 E-value=8e-14 Score=80.50 Aligned_cols=69 Identities=12% Similarity=0.077 Sum_probs=57.0
Q ss_pred CeeEEEEccCCCEEEEeeCCCcEEEeeCCCCCceEEecC--CCeEEEEeeCCCEEEEEeCCCcEEEEECcCCC
Q 045566 42 PIKEVAWIPEMNLLATGSWDKTLKYWDTRQPNPVHTQQL--PDRCYALTVRYPLMVVGTADRNLVVFNLQNPQ 112 (112)
Q Consensus 42 ~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~ 112 (112)
.+..++|+|++++++++ ++.|.+||+.+.+.+..+.. ....++|+|+++++++++.++.|.+||+++++
T Consensus 242 ~~~~~~~s~dg~~l~~~--~~~v~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~i~v~d~~~~~ 312 (337)
T 1pby_B 242 FYFSTAVNPAKTRAFGA--YNVLESFDLEKNASIKRVPLPHSYYSVNVSTDGSTVWLGGALGDLAAYDAETLE 312 (337)
T ss_dssp CEEEEEECTTSSEEEEE--ESEEEEEETTTTEEEEEEECSSCCCEEEECTTSCEEEEESBSSEEEEEETTTCC
T ss_pred ceeeEEECCCCCEEEEe--CCeEEEEECCCCcCcceecCCCceeeEEECCCCCEEEEEcCCCcEEEEECcCCc
Confidence 34568999999988877 68999999988876655543 45678999999999999999999999998764
No 143
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.61 E-value=2.3e-14 Score=90.24 Aligned_cols=98 Identities=7% Similarity=-0.021 Sum_probs=75.3
Q ss_pred CeeEEEcCCCCEEEEEcCC---------CcEEEEEcCCCCCcEEEe---eccCCeeEEEEccCCCEEEEeeCCCcEEEee
Q 045566 1 VLCSTWKDDGTTVFSGGCD---------KQVKMWPLLSGGQPVTVA---MHDAPIKEVAWIPEMNLLATGSWDKTLKYWD 68 (112)
Q Consensus 1 v~~~~~~~~~~~l~~~~~~---------~~v~~~~~~~~~~~~~~~---~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~ 68 (112)
|.+++|+|+|++|++++.+ +.+.+||+.+++. ..+. .+...+..++|+|+|+.++.++. +.|++||
T Consensus 63 v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~-~~l~~~~~~~~~~~~~~~SPdG~~la~~~~-~~i~~~~ 140 (723)
T 1xfd_A 63 AIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDP-QSLDPPEVSNAKLQYAGWGPKGQQLIFIFE-NNIYYCA 140 (723)
T ss_dssp CSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCC-EECCCTTCCSCCCSBCCBCSSTTCEEEEET-TEEEEES
T ss_pred cceEEECCCCCEEEEEecCccceeecceeeEEEEECCCCce-EeccCCccccccccccEECCCCCEEEEEEC-CeEEEEE
Confidence 4578999999999998764 7788999987765 3333 33344888999999999988875 7899999
Q ss_pred CCCCCceEEecC---CC------------------eEEEEeeCCCEEEEEeCC
Q 045566 69 TRQPNPVHTQQL---PD------------------RCYALTVRYPLMVVGTAD 100 (112)
Q Consensus 69 ~~~~~~~~~~~~---~~------------------~~~~~~~~~~~~~~~~~d 100 (112)
+.+++....... .. ..+.|+|+++.|+.++.+
T Consensus 141 ~~~g~~~~~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~~la~~~~~ 193 (723)
T 1xfd_A 141 HVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAIN 193 (723)
T ss_dssp SSSSCCEEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEEEE
T ss_pred CCCCceEEEecCCCCCceECcccceeEEEEeccCcceEEECCCCCEEEEEEEC
Confidence 988766544332 11 578999999999888754
No 144
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.60 E-value=3.5e-14 Score=92.86 Aligned_cols=107 Identities=11% Similarity=0.015 Sum_probs=87.7
Q ss_pred eeEEEcCCCCEEEEEcCCCcEEEEEcCCCCCcEEEeeccCCeeEEEEccCCCEEEEeeCCC----------cEEEeeCCC
Q 045566 2 LCSTWKDDGTTVFSGGCDKQVKMWPLLSGGQPVTVAMHDAPIKEVAWIPEMNLLATGSWDK----------TLKYWDTRQ 71 (112)
Q Consensus 2 ~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~----------~i~~w~~~~ 71 (112)
..++|+|+|+.|++++.++.+++||+.+++.......+...+..++|+|+|++++.++.++ .+++||+.+
T Consensus 382 ~~~~~SpDG~~la~~~~~~~v~~~d~~tg~~~~~~~~~~~~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~~ 461 (1045)
T 1k32_A 382 FAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEG 461 (1045)
T ss_dssp EEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTT
T ss_pred eeeEECCCCCEEEEECCCCeEEEEECCCCceEEeccCCCCCccceEECCCCCeEEEEecCccccccCCCCCeEEEEECCC
Confidence 5789999999999999999999999988877666667888899999999999998876644 899999987
Q ss_pred CCceEEecC---CCeEEEEeeCCCEEEEEeCCCcEEEEECc
Q 045566 72 PNPVHTQQL---PDRCYALTVRYPLMVVGTADRNLVVFNLQ 109 (112)
Q Consensus 72 ~~~~~~~~~---~~~~~~~~~~~~~~~~~~~d~~v~~~d~~ 109 (112)
++ ...+.. ....+.|+|+++.++.++.++....|+..
T Consensus 462 g~-~~~l~~~~~~~~~~~~spdG~~l~~~s~~~~~~~~~~~ 501 (1045)
T 1k32_A 462 RK-IFAATTENSHDYAPAFDADSKNLYYLSYRSLDPSPDRV 501 (1045)
T ss_dssp TE-EEECSCSSSBEEEEEECTTSCEEEEEESCCCCCEECSS
T ss_pred Cc-EEEeeCCCcccCCceEcCCCCEEEEEecccCCcCcchh
Confidence 65 333332 23567899999999999988877777653
No 145
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.59 E-value=1.5e-14 Score=89.42 Aligned_cols=104 Identities=19% Similarity=0.094 Sum_probs=84.7
Q ss_pred eEEEcCCCCEEEEEcCC----CcEEEEEcCCCCCcEEEeeccCCeeEEEEccCCCEEEEeeCCC--cEEEeeCCCCCceE
Q 045566 3 CSTWKDDGTTVFSGGCD----KQVKMWPLLSGGQPVTVAMHDAPIKEVAWIPEMNLLATGSWDK--TLKYWDTRQPNPVH 76 (112)
Q Consensus 3 ~~~~~~~~~~l~~~~~~----~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~--~i~~w~~~~~~~~~ 76 (112)
+++|+|+|++++.++.+ ..|.+||+.+++. ..+..+...+..++|+|||+.++++..++ .|++||+.+++..
T Consensus 154 ~~~~spDG~~la~~~~~~~~~~~i~~~d~~~g~~-~~l~~~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~~~- 231 (582)
T 3o4h_A 154 GFVSDIRGDLIAGLGFFGGGRVSLFTSNLSSGGL-RVFDSGEGSFSSASISPGMKVTAGLETAREARLVTVDPRDGSVE- 231 (582)
T ss_dssp EEEEEEETTEEEEEEEEETTEEEEEEEETTTCCC-EEECCSSCEEEEEEECTTSCEEEEEECSSCEEEEEECTTTCCEE-
T ss_pred eEEECCCCCEEEEEEEcCCCCeEEEEEcCCCCCc-eEeecCCCccccceECCCCCEEEEccCCCeeEEEEEcCCCCcEE-
Confidence 57899999999988776 7799999877665 46677778889999999999999888888 8999999887765
Q ss_pred EecCC---CeEEE--------EeeCCCEEEEEeCCCcEEEEEC
Q 045566 77 TQQLP---DRCYA--------LTVRYPLMVVGTADRNLVVFNL 108 (112)
Q Consensus 77 ~~~~~---~~~~~--------~~~~~~~~~~~~~d~~v~~~d~ 108 (112)
..... ..... |+|++..+++++.++.+++|++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~g~~~l~~~ 274 (582)
T 3o4h_A 232 DLELPSKDFSSYRPTAITWLGYLPDGRLAVVARREGRSAVFID 274 (582)
T ss_dssp ECCCSCSHHHHHCCSEEEEEEECTTSCEEEEEEETTEEEEEET
T ss_pred EccCCCcChhhhhhccccceeEcCCCcEEEEEEcCCcEEEEEE
Confidence 33322 12334 9999988899999999999987
No 146
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.59 E-value=3.4e-14 Score=82.46 Aligned_cols=108 Identities=10% Similarity=0.018 Sum_probs=85.9
Q ss_pred eEEEcCCCCEEEEEcCCCcEEEEEcCCCCCcEEEeecc-CCeeEEEEccCCCEE-EEeeCCCcEEEeeCCCCCceEEecC
Q 045566 3 CSTWKDDGTTVFSGGCDKQVKMWPLLSGGQPVTVAMHD-APIKEVAWIPEMNLL-ATGSWDKTLKYWDTRQPNPVHTQQL 80 (112)
Q Consensus 3 ~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~~-~~~~~~~~i~~w~~~~~~~~~~~~~ 80 (112)
.+++++++..+++++.++.|.+||..+++....+.... ..+..++|+|+++.+ ++...++.|.+||+.+++.+.....
T Consensus 4 g~~~~~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~~~~~~ 83 (349)
T 1jmx_B 4 GPALKAGHEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHANL 83 (349)
T ss_dssp CCCCCTTCEEEEEEETTTEEEEEETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEES
T ss_pred cccccCCCEEEEEeCCCCeEEEEECCCCcEEEEEecCCCCCCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcEEEEEEc
Confidence 45678888999999999999999998887766665332 256889999999865 4556789999999988876655543
Q ss_pred C---------CeEEEEeeCCCEEEEEeCC------------CcEEEEECcC
Q 045566 81 P---------DRCYALTVRYPLMVVGTAD------------RNLVVFNLQN 110 (112)
Q Consensus 81 ~---------~~~~~~~~~~~~~~~~~~d------------~~v~~~d~~~ 110 (112)
. ...+.++|+++++++++.+ +.|.+||+.+
T Consensus 84 ~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~ 134 (349)
T 1jmx_B 84 SSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTAD 134 (349)
T ss_dssp CCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGG
T ss_pred ccccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCC
Confidence 2 4678999999999998865 8999999876
No 147
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.59 E-value=9.9e-14 Score=80.12 Aligned_cols=108 Identities=11% Similarity=0.042 Sum_probs=84.3
Q ss_pred eeEEEcCCCCEE-EEEcCCCcEEEEEcCCCCCcEEEeec-----cCCeeEEEEccCCCEEEEee------------CCCc
Q 045566 2 LCSTWKDDGTTV-FSGGCDKQVKMWPLLSGGQPVTVAMH-----DAPIKEVAWIPEMNLLATGS------------WDKT 63 (112)
Q Consensus 2 ~~~~~~~~~~~l-~~~~~~~~v~~~~~~~~~~~~~~~~~-----~~~v~~~~~~~~~~~~~~~~------------~~~~ 63 (112)
..++|+|+++.+ +++..++.|.+||+.+++....+... ...+..++|+|+++.++.+. .++.
T Consensus 37 ~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~ 116 (337)
T 1pby_B 37 MVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTR 116 (337)
T ss_dssp CCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTEEEECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCE
T ss_pred cceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCCcccccccccceEECCCCCEEEEEecccccccccccccCce
Confidence 468999999766 55566789999999888876655421 22567899999998888775 5799
Q ss_pred EEEeeCCCCCceEEecC--CCeEEEEeeCCCEEEEEeCCCcEEEEECcCC
Q 045566 64 LKYWDTRQPNPVHTQQL--PDRCYALTVRYPLMVVGTADRNLVVFNLQNP 111 (112)
Q Consensus 64 i~~w~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~d~~v~~~d~~~~ 111 (112)
|.+||+.+.+.+..+.. ....+.|+|++++++++ ++.+.+||++++
T Consensus 117 i~v~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~--~~~i~~~d~~~~ 164 (337)
T 1pby_B 117 VALYDAETLSRRKAFEAPRQITMLAWARDGSKLYGL--GRDLHVMDPEAG 164 (337)
T ss_dssp EEEEETTTTEEEEEEECCSSCCCEEECTTSSCEEEE--SSSEEEEETTTT
T ss_pred EEEEECCCCcEEEEEeCCCCcceeEECCCCCEEEEe--CCeEEEEECCCC
Confidence 99999988776655543 34678899999988887 688999999875
No 148
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.59 E-value=1.3e-13 Score=78.17 Aligned_cols=107 Identities=11% Similarity=0.122 Sum_probs=78.3
Q ss_pred CeeEEEcCCCCEEEEEcCCCcEEEEEcCC-CCCcEEEeec-cCCeeEEEEccCCCEEEEee--CCCcEEEe--eCCCCCc
Q 045566 1 VLCSTWKDDGTTVFSGGCDKQVKMWPLLS-GGQPVTVAMH-DAPIKEVAWIPEMNLLATGS--WDKTLKYW--DTRQPNP 74 (112)
Q Consensus 1 v~~~~~~~~~~~l~~~~~~~~v~~~~~~~-~~~~~~~~~~-~~~v~~~~~~~~~~~~~~~~--~~~~i~~w--~~~~~~~ 74 (112)
|.+++|+|+++++++++ ++.|.+||+.+ ++.......+ ...+.+++|+|+++.++.+. .++...+| +..+.+.
T Consensus 44 v~~~~~spdg~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~l~~~~~~~~~~ 122 (297)
T 2ojh_A 44 FEAPNWSPDGKYLLLNS-EGLLYRLSLAGDPSPEKVDTGFATICNNDHGISPDGALYAISDKVEFGKSAIYLLPSTGGTP 122 (297)
T ss_dssp CEEEEECTTSSEEEEEE-TTEEEEEESSSCCSCEECCCTTCCCBCSCCEECTTSSEEEEEECTTTSSCEEEEEETTCCCC
T ss_pred eEeeEECCCCCEEEEEc-CCeEEEEeCCCCCCceEeccccccccccceEECCCCCEEEEEEeCCCCcceEEEEECCCCce
Confidence 56899999999999887 68999999988 6655444444 36788999999999999888 33455555 5444442
Q ss_pred eEEec--CCCeEEEEeeCCCEEE-EEeCCCcEEEEECc
Q 045566 75 VHTQQ--LPDRCYALTVRYPLMV-VGTADRNLVVFNLQ 109 (112)
Q Consensus 75 ~~~~~--~~~~~~~~~~~~~~~~-~~~~d~~v~~~d~~ 109 (112)
..+. .....+.|+|+++.++ ++..++.+.+|+++
T Consensus 123 -~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~l~~~~ 159 (297)
T 2ojh_A 123 -RLMTKNLPSYWHGWSPDGKSFTYCGIRDQVFDIYSMD 159 (297)
T ss_dssp -EECCSSSSEEEEEECTTSSEEEEEEEETTEEEEEEEE
T ss_pred -EEeecCCCccceEECCCCCEEEEEECCCCceEEEEEE
Confidence 2222 2345678999999777 67788989999853
No 149
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.58 E-value=2.9e-14 Score=89.74 Aligned_cols=109 Identities=11% Similarity=0.018 Sum_probs=82.0
Q ss_pred eeEEEcCCCCEEEEEcCCCcEEEEEcCC-----CCCcEEEeeccCC--------------eeEEEEccCCCEEEEee---
Q 045566 2 LCSTWKDDGTTVFSGGCDKQVKMWPLLS-----GGQPVTVAMHDAP--------------IKEVAWIPEMNLLATGS--- 59 (112)
Q Consensus 2 ~~~~~~~~~~~l~~~~~~~~v~~~~~~~-----~~~~~~~~~~~~~--------------v~~~~~~~~~~~~~~~~--- 59 (112)
.+++|+|+|+.++.+ .++.|.+|++.+ ++.......+... +.++.|+|+|+.++.++
T Consensus 124 ~~~~~SpdG~~la~~-~~~~i~v~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~~la~~~~d~ 202 (706)
T 2z3z_A 124 ASLDFSPVGDRVAYV-RNHNLYIARGGKLGEGMSRAIAVTIDGTETLVYGQAVHQREFGIEKGTFWSPKGSCLAFYRMDQ 202 (706)
T ss_dssp TTCEECTTSSEEEEE-ETTEEEEEECBCTTSCCCCCEESCSCCBTTEEESSCCGGGCTTCCCSEEECTTSSEEEEEEEEC
T ss_pred cCCcCCCCCCEEEEE-ECCeEEEEecCcccccCCCcEEeccCCCCCeEcccchhhhhcCCCceEEECCCCCEEEEEEECC
Confidence 467999999999885 678999999987 6554333322222 47899999999998886
Q ss_pred ------------------------------CCCcEEEeeCCCCCceEEecC-----CCeEEEEeeCCCEEEEEeCCC---
Q 045566 60 ------------------------------WDKTLKYWDTRQPNPVHTQQL-----PDRCYALTVRYPLMVVGTADR--- 101 (112)
Q Consensus 60 ------------------------------~~~~i~~w~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~d~--- 101 (112)
.+..|.+||+.+++....... ....+.|+|+++.+++++.++
T Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~ 282 (706)
T 2z3z_A 203 SMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKTVYLQTGEPKEKFLTNLSWSPDENILYVAEVNRAQN 282 (706)
T ss_dssp TTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEEEECCCCSCTTCEEEEEEECTTSSEEEEEEECTTSC
T ss_pred CCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCceEeeccCCCCceeEeeEEEECCCCEEEEEEeCCCCC
Confidence 346799999987764433211 235789999999999887775
Q ss_pred --cEEEEECcCC
Q 045566 102 --NLVVFNLQNP 111 (112)
Q Consensus 102 --~v~~~d~~~~ 111 (112)
.|.+||+.++
T Consensus 283 ~~~v~~~d~~~g 294 (706)
T 2z3z_A 283 ECKVNAYDAETG 294 (706)
T ss_dssp EEEEEEEETTTC
T ss_pred eeEEEEEECCCC
Confidence 8999998876
No 150
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.57 E-value=7.3e-14 Score=81.43 Aligned_cols=107 Identities=16% Similarity=0.118 Sum_probs=77.3
Q ss_pred eeEEEcCCCCEEEEEcC---CCcEEEEEcCCCCC--cEEEeeccCCeeEEEEccCCCEEEEee-CCCcEEEeeCCCCC--
Q 045566 2 LCSTWKDDGTTVFSGGC---DKQVKMWPLLSGGQ--PVTVAMHDAPIKEVAWIPEMNLLATGS-WDKTLKYWDTRQPN-- 73 (112)
Q Consensus 2 ~~~~~~~~~~~l~~~~~---~~~v~~~~~~~~~~--~~~~~~~~~~v~~~~~~~~~~~~~~~~-~~~~i~~w~~~~~~-- 73 (112)
..++|+|+|+ +++++. ++.|.+|++..++. +..+..+...+..++|+|+++++++++ .++.+.+|++....
T Consensus 43 ~~~a~spdg~-l~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~p~~~a~spdg~~l~~~~~~~~~v~v~~~~~~g~~ 121 (347)
T 3hfq_A 43 TYLALSAKDC-LYSVDKEDDEGGIAAWQIDGQTAHKLNTVVAPGTPPAYVAVDEARQLVYSANYHKGTAEVMKIAADGAL 121 (347)
T ss_dssp CCEEECTTCE-EEEEEEETTEEEEEEEEEETTEEEEEEEEEEESCCCSEEEEETTTTEEEEEETTTTEEEEEEECTTSCE
T ss_pred ceEEEccCCe-EEEEEecCCCceEEEEEecCCcEEEeeeeecCCCCCEEEEECCCCCEEEEEeCCCCEEEEEEeCCCCCe
Confidence 4689999999 555544 68999999865542 233345667789999999999887777 68899999996332
Q ss_pred -ceEEecC------------CCeEEEEeeCCCEEEEEeCCCcEEEEECc
Q 045566 74 -PVHTQQL------------PDRCYALTVRYPLMVVGTADRNLVVFNLQ 109 (112)
Q Consensus 74 -~~~~~~~------------~~~~~~~~~~~~~~~~~~~d~~v~~~d~~ 109 (112)
.+..... ....++++|+++.+++...++.|.+||+.
T Consensus 122 ~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~~~~v~~~~~~ 170 (347)
T 3hfq_A 122 TLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLGSDKVYVYNVS 170 (347)
T ss_dssp EEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETTTTEEEEEEEC
T ss_pred eecceeecCCCCCCccccCCCceEEEECCCCcEEEEeCCCCEEEEEEEC
Confidence 2222221 13458999999955555668889999987
No 151
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.57 E-value=4.4e-13 Score=77.54 Aligned_cols=110 Identities=10% Similarity=0.110 Sum_probs=80.8
Q ss_pred eeEEEcCCCCEEEEE-cCCCc-EEEEEcCCCCCcE----EEeeccCCeeEEEEccCCCEE-EEeeCCCcEEEeeCCCCCc
Q 045566 2 LCSTWKDDGTTVFSG-GCDKQ-VKMWPLLSGGQPV----TVAMHDAPIKEVAWIPEMNLL-ATGSWDKTLKYWDTRQPNP 74 (112)
Q Consensus 2 ~~~~~~~~~~~l~~~-~~~~~-v~~~~~~~~~~~~----~~~~~~~~v~~~~~~~~~~~~-~~~~~~~~i~~w~~~~~~~ 74 (112)
.+++|+|+|++++++ ..++. +.+|++....... ...........++|+|+++++ ++...++.|.+||+.+.+.
T Consensus 131 ~~~~~spdg~~l~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~ 210 (331)
T 3u4y_A 131 VGIAISPNGNGLILIDRSSANTVRRFKIDADGVLFDTGQEFISGGTRPFNITFTPDGNFAFVANLIGNSIGILETQNPEN 210 (331)
T ss_dssp EEEEECTTSSCEEEEEETTTTEEEEEEECTTCCEEEEEEEEECSSSSEEEEEECTTSSEEEEEETTTTEEEEEECSSTTS
T ss_pred cceEECCCCCEEEEEecCCCceEEEEEECCCCcEeecCCccccCCCCccceEECCCCCEEEEEeCCCCeEEEEECCCCcc
Confidence 468999999865554 55578 9999987554432 112234567899999999855 4555688999999988877
Q ss_pred ---eEEecC--CCeEEEEeeCCCEEEEEe-CCCcEEEEECcCC
Q 045566 75 ---VHTQQL--PDRCYALTVRYPLMVVGT-ADRNLVVFNLQNP 111 (112)
Q Consensus 75 ---~~~~~~--~~~~~~~~~~~~~~~~~~-~d~~v~~~d~~~~ 111 (112)
+..+.. ....++|+|+++++++++ .++.|.+||+.++
T Consensus 211 ~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~i~~~d~~~~ 253 (331)
T 3u4y_A 211 ITLLNAVGTNNLPGTIVVSRDGSTVYVLTESTVDVFNFNQLSG 253 (331)
T ss_dssp CEEEEEEECSSCCCCEEECTTSSEEEEECSSEEEEEEEETTTT
T ss_pred cceeeeccCCCCCceEEECCCCCEEEEEEcCCCEEEEEECCCC
Confidence 655543 346789999999777665 4678999998875
No 152
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.56 E-value=2.1e-14 Score=90.54 Aligned_cols=96 Identities=11% Similarity=0.072 Sum_probs=73.2
Q ss_pred CeeEEEcCCCCEEEEEcC---------CCcEEEEEcCCCCCc--EEEeeccCCeeEEEEccCCCEEEEeeCCCcEEEeeC
Q 045566 1 VLCSTWKDDGTTVFSGGC---------DKQVKMWPLLSGGQP--VTVAMHDAPIKEVAWIPEMNLLATGSWDKTLKYWDT 69 (112)
Q Consensus 1 v~~~~~~~~~~~l~~~~~---------~~~v~~~~~~~~~~~--~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~ 69 (112)
+.+++|+|||++|+.++. ++.+++||+.+++.. ..+ ...+..++|+|+|+.++.+. ++.|++|++
T Consensus 62 ~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~~g~~~~~~~l---~~~~~~~~~SPDG~~la~~~-~~~i~~~~~ 137 (719)
T 1z68_A 62 ASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLSNGEFVRGNEL---PRPIQYLCWSPVGSKLAYVY-QNNIYLKQR 137 (719)
T ss_dssp CSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECCSSCC---CSSBCCEEECSSTTCEEEEE-TTEEEEESS
T ss_pred eeeEEECCCCCeEEEEecCceeEEeecceEEEEEECCCCccccceec---CcccccceECCCCCEEEEEE-CCeEEEEeC
Confidence 457899999999998876 689999999876542 122 24678899999999988875 789999999
Q ss_pred CCCCceEEecC---------------------CCeEEEEeeCCCEEEEEeCC
Q 045566 70 RQPNPVHTQQL---------------------PDRCYALTVRYPLMVVGTAD 100 (112)
Q Consensus 70 ~~~~~~~~~~~---------------------~~~~~~~~~~~~~~~~~~~d 100 (112)
.+++....... ....+.|+|+|+.|+.++.|
T Consensus 138 ~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~wSPDG~~la~~~~d 189 (719)
T 1z68_A 138 PGDPPFQITFNGRENKIFNGIPDWVYEEEMLATKYALWWSPNGKFLAYAEFN 189 (719)
T ss_dssp TTSCCEECCCCCBTTTEEESSCCHHHHHHTTCSSCCEEECTTSSEEEEEEEE
T ss_pred CCCCcEEEecCCCcCCeEcccccceeeeecccCcccEEECCCCCEEEEEEEC
Confidence 87765432211 11478999999999988765
No 153
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.56 E-value=1.6e-13 Score=79.39 Aligned_cols=108 Identities=14% Similarity=0.098 Sum_probs=77.9
Q ss_pred eeEEEcCCCCEEEEEc-CCCcEEEEEcCCC---CCcEEEeeccCCeeEEEEccCCCEEEEee-CCCcEEEeeCCC-CCce
Q 045566 2 LCSTWKDDGTTVFSGG-CDKQVKMWPLLSG---GQPVTVAMHDAPIKEVAWIPEMNLLATGS-WDKTLKYWDTRQ-PNPV 75 (112)
Q Consensus 2 ~~~~~~~~~~~l~~~~-~~~~v~~~~~~~~---~~~~~~~~~~~~v~~~~~~~~~~~~~~~~-~~~~i~~w~~~~-~~~~ 75 (112)
..++|+|+++.+++++ .++.|.+|++..+ +....+. ....+.+++|+|+++.+++++ .++.+.+||+.+ ++..
T Consensus 87 ~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~-~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~ 165 (343)
T 1ri6_A 87 THISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVE-GLDGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHLV 165 (343)
T ss_dssp SEEEECTTSSEEEEEETTTTEEEEEEEETTEEEEEEEEEC-CCTTBCCCEECTTSSEEEEEEGGGTEEEEEEECTTSCEE
T ss_pred cEEEEcCCCCEEEEEecCCCeEEEEECCCCcccccccccc-CCCCceEEEECCCCCEEEEecCCCCEEEEEEecCCCcee
Confidence 5789999999876665 4888999998522 2222333 334578899999999877776 889999999987 4332
Q ss_pred E----EecC----CCeEEEEeeCCCEEEEEe-CCCcEEEEECcC
Q 045566 76 H----TQQL----PDRCYALTVRYPLMVVGT-ADRNLVVFNLQN 110 (112)
Q Consensus 76 ~----~~~~----~~~~~~~~~~~~~~~~~~-~d~~v~~~d~~~ 110 (112)
. .... ....++|+|+++++++++ .++.+.+||++.
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~~ 209 (343)
T 1ri6_A 166 AQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKD 209 (343)
T ss_dssp EEEEEEEECSTTCCEEEEEECTTSSEEEEEETTTTEEEEEESSC
T ss_pred eecccccccCCCCCcceEEECCCCCEEEEEeCCCCEEEEEEecC
Confidence 1 1211 235688999999776655 788999999853
No 154
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.55 E-value=2.4e-13 Score=79.69 Aligned_cols=107 Identities=14% Similarity=0.146 Sum_probs=76.4
Q ss_pred eeEEEcCCCCEEEEEc-CCCcEEEEEcCCCCC--cEEEe---eccCCeeEEEEccCCCEEEEeeC--CCcEEEeeCC--C
Q 045566 2 LCSTWKDDGTTVFSGG-CDKQVKMWPLLSGGQ--PVTVA---MHDAPIKEVAWIPEMNLLATGSW--DKTLKYWDTR--Q 71 (112)
Q Consensus 2 ~~~~~~~~~~~l~~~~-~~~~v~~~~~~~~~~--~~~~~---~~~~~v~~~~~~~~~~~~~~~~~--~~~i~~w~~~--~ 71 (112)
..++|+|+|+++++++ .++.|.+|++.+++. ...+. .+......++|+|++++++.+.. ++.+.+|++. +
T Consensus 214 ~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~~ 293 (361)
T 3scy_A 214 RHLIFNSDGKFAYLINEIGGTVIAFRYADGMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLKADGVAIFKVDETN 293 (361)
T ss_dssp EEEEECTTSSEEEEEETTTCEEEEEEEETTEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEECSSSCEEEEEEECTTT
T ss_pred eEEEEcCCCCEEEEEcCCCCeEEEEEecCCceEEeEEEecCCCCCCCcccEEECCCCCEEEEECCCCCCEEEEEEEcCCC
Confidence 4689999999887766 689999999875543 12222 22244679999999998866655 4889999986 3
Q ss_pred CC--ceEEecC--CCeEEEEeeCCCEEEEEe-CCCcEEEEEC
Q 045566 72 PN--PVHTQQL--PDRCYALTVRYPLMVVGT-ADRNLVVFNL 108 (112)
Q Consensus 72 ~~--~~~~~~~--~~~~~~~~~~~~~~~~~~-~d~~v~~~d~ 108 (112)
++ .+..... ....++|+|+++++++++ .++.+.+|++
T Consensus 294 g~~~~~~~~~~g~~~~~~~~spdg~~l~~~~~~~~~v~v~~~ 335 (361)
T 3scy_A 294 GTLTKVGYQLTGIHPRNFIITPNGKYLLVACRDTNVIQIFER 335 (361)
T ss_dssp CCEEEEEEEECSSCCCEEEECTTSCEEEEEETTTTEEEEEEE
T ss_pred CcEEEeeEecCCCCCceEEECCCCCEEEEEECCCCCEEEEEE
Confidence 33 2333322 456889999999888887 5688999644
No 155
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.55 E-value=5.4e-13 Score=77.42 Aligned_cols=67 Identities=19% Similarity=0.195 Sum_probs=54.9
Q ss_pred eeEEEEcc-CCCEEEEeeCCCcEEEeeCCCCCceEEecC--CCeEEEEeeCCCEEEEEeCCCcEEEEECcCC
Q 045566 43 IKEVAWIP-EMNLLATGSWDKTLKYWDTRQPNPVHTQQL--PDRCYALTVRYPLMVVGTADRNLVVFNLQNP 111 (112)
Q Consensus 43 v~~~~~~~-~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~d~~v~~~d~~~~ 111 (112)
+..++++| +++.++++ ++.|.+||+.+.+.+..+.. ....++|+++++.+++++.++.|.+||++++
T Consensus 257 ~~~~~~sp~dg~~l~~~--~~~v~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~v~v~d~~~~ 326 (349)
T 1jmx_B 257 YFTGLRSPKDPNQIYGV--LNRLAKYDLKQRKLIKAANLDHTYYCVAFDKKGDKLYLGGTFNDLAVFNPDTL 326 (349)
T ss_dssp EEEEEECSSCTTEEEEE--ESEEEEEETTTTEEEEEEECSSCCCEEEECSSSSCEEEESBSSEEEEEETTTT
T ss_pred ceeeEecCCCCCEEEEE--cCeEEEEECccCeEEEEEcCCCCccceEECCCCCEEEEecCCCeEEEEecccc
Confidence 45677789 99988887 88999999998876655533 4567899999998888888999999999875
No 156
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.55 E-value=1.2e-13 Score=90.36 Aligned_cols=108 Identities=6% Similarity=0.043 Sum_probs=87.4
Q ss_pred eeEEEcCCCCEEEEEcCCCcEE-EEEcCCCCCcEEEeeccCCeeEEEEccCCCEEEEeeCCCcEEEeeCCCCCceEEe--
Q 045566 2 LCSTWKDDGTTVFSGGCDKQVK-MWPLLSGGQPVTVAMHDAPIKEVAWIPEMNLLATGSWDKTLKYWDTRQPNPVHTQ-- 78 (112)
Q Consensus 2 ~~~~~~~~~~~l~~~~~~~~v~-~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~-- 78 (112)
..++|+ +|+.++.++.+..+. +|+...++. ..+..+...+..++|+|+++.+++++.++.+++||+.+++.....
T Consensus 341 ~~~~~s-dg~~l~~~s~~~~l~~~~d~~~~~~-~~l~~~~~~~~~~~~SpDG~~la~~~~~~~v~~~d~~tg~~~~~~~~ 418 (1045)
T 1k32_A 341 VRRGGD-TKVAFIHGTREGDFLGIYDYRTGKA-EKFEENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIERS 418 (1045)
T ss_dssp EEECSS-SEEEEEEEETTEEEEEEEETTTCCE-EECCCCCCSEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEEC
T ss_pred EeeeEc-CCCeEEEEECCCceEEEEECCCCCc-eEecCCccceeeeEECCCCCEEEEECCCCeEEEEECCCCceEEeccC
Confidence 467889 999999888888888 889876543 344467788999999999999999999999999999988765544
Q ss_pred -cCCCeEEEEeeCCCEEEEEeCCC----------cEEEEECcCC
Q 045566 79 -QLPDRCYALTVRYPLMVVGTADR----------NLVVFNLQNP 111 (112)
Q Consensus 79 -~~~~~~~~~~~~~~~~~~~~~d~----------~v~~~d~~~~ 111 (112)
......++|+|++++++.++.++ .|++||+.++
T Consensus 419 ~~~~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~~g 462 (1045)
T 1k32_A 419 REAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGR 462 (1045)
T ss_dssp SSSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTTT
T ss_pred CCCCccceEECCCCCeEEEEecCccccccCCCCCeEEEEECCCC
Confidence 23456789999999998887644 8999998765
No 157
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.54 E-value=1.3e-12 Score=76.55 Aligned_cols=108 Identities=7% Similarity=0.060 Sum_probs=77.1
Q ss_pred eeEEEcCCCCEEEEE-cCCCcEEEEEcCCCCC------cE------E-EeeccCCeeEEEEccCCCEEEEee-CCCcEEE
Q 045566 2 LCSTWKDDGTTVFSG-GCDKQVKMWPLLSGGQ------PV------T-VAMHDAPIKEVAWIPEMNLLATGS-WDKTLKY 66 (112)
Q Consensus 2 ~~~~~~~~~~~l~~~-~~~~~v~~~~~~~~~~------~~------~-~~~~~~~v~~~~~~~~~~~~~~~~-~~~~i~~ 66 (112)
.+++|+|+|++++++ ..++.+.+|++..... +. . ..........++|+|++++++.++ .++.|.+
T Consensus 158 ~~~~~spdg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v 237 (361)
T 3scy_A 158 HCVRITPDGKYLLADDLGTDQIHKFNINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLINEIGGTVIA 237 (361)
T ss_dssp EEEEECTTSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTCEEEE
T ss_pred eEEEECCCCCEEEEEeCCCCEEEEEEEcCCCCcccccceeecccccceecCCCCCCeEEEEcCCCCEEEEEcCCCCeEEE
Confidence 468999999976555 4578999998875442 21 1 123345678999999999777666 6899999
Q ss_pred eeCCCCCc--eEEecCC------CeEEEEeeCCCEEEEEeCC--CcEEEEECc
Q 045566 67 WDTRQPNP--VHTQQLP------DRCYALTVRYPLMVVGTAD--RNLVVFNLQ 109 (112)
Q Consensus 67 w~~~~~~~--~~~~~~~------~~~~~~~~~~~~~~~~~~d--~~v~~~d~~ 109 (112)
|++.+++. +...... ...++|+|++++++++..+ +.|.+|++.
T Consensus 238 ~~~~~g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~ 290 (361)
T 3scy_A 238 FRYADGMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLKADGVAIFKVD 290 (361)
T ss_dssp EEEETTEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEECSSSCEEEEEEEC
T ss_pred EEecCCceEEeEEEecCCCCCCCcccEEECCCCCEEEEECCCCCCEEEEEEEc
Confidence 99986532 2222211 2478999999988777665 789999985
No 158
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.52 E-value=2.5e-13 Score=85.51 Aligned_cols=94 Identities=5% Similarity=-0.075 Sum_probs=71.3
Q ss_pred CeeEEEcCCCCEEEEEcCCCcEEEEEcCCCCCcEEEeeccCCeeEEEEccCCCEEEEeeCCCcEEEeeCCC-----CCce
Q 045566 1 VLCSTWKDDGTTVFSGGCDKQVKMWPLLSGGQPVTVAMHDAPIKEVAWIPEMNLLATGSWDKTLKYWDTRQ-----PNPV 75 (112)
Q Consensus 1 v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~-----~~~~ 75 (112)
|.+++|+|+ +.++.+. ++.+++||+.+++. ..+..+...+..++|+|+|+.++.+ .++.|++|++.+ ++..
T Consensus 84 v~~~~~spd-~~~~~~~-~~~i~~~d~~~~~~-~~l~~~~~~~~~~~~SpdG~~la~~-~~~~i~v~~~~~~~~~~g~~~ 159 (706)
T 2z3z_A 84 SFRTLDAGR-GLVVLFT-QGGLVGFDMLARKV-TYLFDTNEETASLDFSPVGDRVAYV-RNHNLYIARGGKLGEGMSRAI 159 (706)
T ss_dssp CEEEEETTT-TEEEEEE-TTEEEEEETTTTEE-EEEECCTTCCTTCEECTTSSEEEEE-ETTEEEEEECBCTTSCCCCCE
T ss_pred ceeEEECCC-CeEEEEE-CCEEEEEECCCCce-EEccCCcccccCCcCCCCCCEEEEE-ECCeEEEEecCcccccCCCcE
Confidence 467899999 6655553 48999999876654 3444456778899999999998885 679999999987 6654
Q ss_pred EEecC--C---------------CeEEEEeeCCCEEEEEe
Q 045566 76 HTQQL--P---------------DRCYALTVRYPLMVVGT 98 (112)
Q Consensus 76 ~~~~~--~---------------~~~~~~~~~~~~~~~~~ 98 (112)
..... . ...+.|+|++++|++++
T Consensus 160 ~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~~la~~~ 199 (706)
T 2z3z_A 160 AVTIDGTETLVYGQAVHQREFGIEKGTFWSPKGSCLAFYR 199 (706)
T ss_dssp ESCSCCBTTEEESSCCGGGCTTCCCSEEECTTSSEEEEEE
T ss_pred EeccCCCCCeEcccchhhhhcCCCceEEECCCCCEEEEEE
Confidence 32221 1 36789999999999987
No 159
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.51 E-value=1.1e-12 Score=78.02 Aligned_cols=102 Identities=17% Similarity=0.159 Sum_probs=83.5
Q ss_pred CeeEEEcCCCCEEEEEcCCCcEEEEEcCCCCCcEEEeeccCCeeEEEEccCCCEEEEeeCCCcEEEeeCCCCCceEEecC
Q 045566 1 VLCSTWKDDGTTVFSGGCDKQVKMWPLLSGGQPVTVAMHDAPIKEVAWIPEMNLLATGSWDKTLKYWDTRQPNPVHTQQL 80 (112)
Q Consensus 1 v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~ 80 (112)
|+.++| +++.|+++ .++.|++||+.+.........++..+..+.+.+. .++.+..||.+.+||+.+.+... +..
T Consensus 90 V~~l~f--d~~~L~v~-~~~~l~v~dv~sl~~~~~~~~~~~~v~~i~~~~p--~~av~~~dG~L~v~dl~~~~~~~-~~~ 163 (388)
T 1xip_A 90 VIFVCF--HGDQVLVS-TRNALYSLDLEELSEFRTVTSFEKPVFQLKNVNN--TLVILNSVNDLSALDLRTKSTKQ-LAQ 163 (388)
T ss_dssp EEEEEE--ETTEEEEE-ESSEEEEEESSSTTCEEEEEECSSCEEEEEECSS--EEEEEETTSEEEEEETTTCCEEE-EEE
T ss_pred eeEEEE--CCCEEEEE-cCCcEEEEEchhhhccCccceeecceeeEEecCC--CEEEEECCCCEEEEEccCCcccc-ccC
Confidence 467888 88999999 8899999999887766666777788888776643 38888999999999998776543 455
Q ss_pred CCeEEEEeeCCCEEEEEeCCCcEEEEECcC
Q 045566 81 PDRCYALTVRYPLMVVGTADRNLVVFNLQN 110 (112)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~d~~v~~~d~~~ 110 (112)
.+.+++|+|.| ++.+..||.+++|+...
T Consensus 164 ~Vs~v~WSpkG--~~vg~~dg~i~~~~~~~ 191 (388)
T 1xip_A 164 NVTSFDVTNSQ--LAVLLKDRSFQSFAWRN 191 (388)
T ss_dssp SEEEEEECSSE--EEEEETTSCEEEEEEET
T ss_pred CceEEEEcCCc--eEEEEcCCcEEEEcCCC
Confidence 77899999999 77899999999997654
No 160
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.50 E-value=2.8e-12 Score=74.73 Aligned_cols=110 Identities=15% Similarity=0.139 Sum_probs=76.5
Q ss_pred eeEEEcCCCCEEEE-EcCCCcEEEEEcCC--CCC--cEEEeecc------CCeeEEEEccCCCEE-EEeeCCCcEEEeeC
Q 045566 2 LCSTWKDDGTTVFS-GGCDKQVKMWPLLS--GGQ--PVTVAMHD------APIKEVAWIPEMNLL-ATGSWDKTLKYWDT 69 (112)
Q Consensus 2 ~~~~~~~~~~~l~~-~~~~~~v~~~~~~~--~~~--~~~~~~~~------~~v~~~~~~~~~~~~-~~~~~~~~i~~w~~ 69 (112)
..++|+|+|+++++ ...++.+.+|++.. ++. ...+.... ..+..++|+|+++++ ++...++.|.+|++
T Consensus 190 ~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~~~~~v~v~~~ 269 (347)
T 3hfq_A 190 RHLVFSPDGQYAFLAGELSSQIASLKYDTQTGAFTQLGIVKTIPADYTAHNGAAAIRLSHDGHFLYVSNRGYNTLAVFAV 269 (347)
T ss_dssp EEEEECTTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESSCTTCCSCCEEEEEEECTTSCEEEEEEETTTEEEEEEE
T ss_pred ceEEECCCCCEEEEEeCCCCEEEEEEecCCCCceEEeeeeeecCCCCCCCCcceeEEECCCCCEEEEEeCCCCEEEEEEE
Confidence 35799999996655 56788999999874 222 11222211 347889999999976 55566899999998
Q ss_pred CCC---CceEEecC---CCeEEEEeeCCCEEEEEeCC-CcEEEE--ECcCC
Q 045566 70 RQP---NPVHTQQL---PDRCYALTVRYPLMVVGTAD-RNLVVF--NLQNP 111 (112)
Q Consensus 70 ~~~---~~~~~~~~---~~~~~~~~~~~~~~~~~~~d-~~v~~~--d~~~~ 111 (112)
... +.+..... ....++|+|+++++++++.+ +.+.+| |.+++
T Consensus 270 ~~~g~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~d~~tg 320 (347)
T 3hfq_A 270 TADGHLTLIQQISTEGDFPRDFDLDPTEAFVVVVNQNTDNATLYARDLTSG 320 (347)
T ss_dssp CGGGCEEEEEEEECSSSCCCEEEECTTSSEEEEEETTTTEEEEEEECTTTC
T ss_pred CCCCcEEEeEEEecCCCCcCeEEECCCCCEEEEEEcCCCcEEEEEEeCCCC
Confidence 732 23333332 35688999999988888765 889999 44444
No 161
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.45 E-value=3.5e-13 Score=85.60 Aligned_cols=107 Identities=8% Similarity=0.072 Sum_probs=82.3
Q ss_pred eeEEEcCCCCEEEEEcCCCcEEEEEcCCCCCcEEEeeccCC-----eeEEEEccCCCEEEEeeCC---------CcEEEe
Q 045566 2 LCSTWKDDGTTVFSGGCDKQVKMWPLLSGGQPVTVAMHDAP-----IKEVAWIPEMNLLATGSWD---------KTLKYW 67 (112)
Q Consensus 2 ~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~-----v~~~~~~~~~~~~~~~~~~---------~~i~~w 67 (112)
.+++|+|++++++++ |+.|.+||+.+++....+..+... ...+.|+|+|+.++.+..+ +.+.+|
T Consensus 20 ~~~~w~~dg~~~~~~--~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~~~~~~~ 97 (740)
T 4a5s_A 20 YSLRWISDHEYLYKQ--ENNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASYDIY 97 (740)
T ss_dssp CCEEECSSSEEEEEE--TTEEEEEETTTCCEEEEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEEEEE
T ss_pred cccEECCCCcEEEEc--CCcEEEEECCCCceEEEEechhhhhhcccccceEECCCCCEEEEEECCeeeEEEccceEEEEE
Confidence 468999999988886 899999999988876666655422 2347899999999888765 556799
Q ss_pred eCCCCCceEE--ecCCCeEEEEeeCCCEEEEEeCCCcEEEEECcCC
Q 045566 68 DTRQPNPVHT--QQLPDRCYALTVRYPLMVVGTADRNLVVFNLQNP 111 (112)
Q Consensus 68 ~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~d~~v~~~d~~~~ 111 (112)
|+.+++.... .........|+|+|+.++.+ .++.|++||+.++
T Consensus 98 d~~~~~~~~l~~~~~~~~~~~~SPdG~~la~~-~~~~i~~~~~~~~ 142 (740)
T 4a5s_A 98 DLNKRQLITEERIPNNTQWVTWSPVGHKLAYV-WNNDIYVKIEPNL 142 (740)
T ss_dssp ETTTTEECCSSCCCTTEEEEEECSSTTCEEEE-ETTEEEEESSTTS
T ss_pred ECCCCcEEEcccCCCcceeeEECCCCCEEEEE-ECCeEEEEECCCC
Confidence 9988764332 22345678999999999887 4689999998765
No 162
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.43 E-value=2.4e-12 Score=80.64 Aligned_cols=110 Identities=11% Similarity=0.004 Sum_probs=79.3
Q ss_pred eeEEEcCCCCEEEEEcCC----------CcEEEEEcCCC-----CCcEEEe-eccCCeeEEEEccCCCEEEEeeCC----
Q 045566 2 LCSTWKDDGTTVFSGGCD----------KQVKMWPLLSG-----GQPVTVA-MHDAPIKEVAWIPEMNLLATGSWD---- 61 (112)
Q Consensus 2 ~~~~~~~~~~~l~~~~~~----------~~v~~~~~~~~-----~~~~~~~-~~~~~v~~~~~~~~~~~~~~~~~~---- 61 (112)
..++|+|+|+.|+.++.+ ..|.+|++.+. .....+. .+...+..+.|+|+|+.++..+.+
T Consensus 133 ~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~SpDG~~la~~~~~~~~~ 212 (662)
T 3azo_A 133 ADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRSAVRELSDDAHRFVTGPRLSPDGRQAVWLAWDHPRM 212 (662)
T ss_dssp EEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCGGGSEESSCSCSSEECCCEECTTSSEEEEEEECTTCC
T ss_pred cCcEECCCCCEEEEEEecccCCCCCCceeEEEEEECCCCccccCCceeEEEecCCCcccCceECCCCCEEEEEECCCCCC
Confidence 468999999999988876 57999998762 3344555 555677889999999999877654
Q ss_pred ----CcEEEeeCC-CC---CceEEe---cCCCeEEEEeeCCCEEEEEeCCC--cEEEEECcCC
Q 045566 62 ----KTLKYWDTR-QP---NPVHTQ---QLPDRCYALTVRYPLMVVGTADR--NLVVFNLQNP 111 (112)
Q Consensus 62 ----~~i~~w~~~-~~---~~~~~~---~~~~~~~~~~~~~~~~~~~~~d~--~v~~~d~~~~ 111 (112)
..|.+||+. ++ +..... ........|+|++++++++..++ .|..||+.++
T Consensus 213 ~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~~~~~~~~spdg~l~~~~~~~~~~~l~~~~~~~~ 275 (662)
T 3azo_A 213 PWEGTELKTARVTEDGRFADTRTLLGGPEEAIAQAEWAPDGSLIVATDRTGWWNLHRVDPATG 275 (662)
T ss_dssp TTTCEEEEEEEECTTSCEEEEEEEEEETTBCEEEEEECTTSCEEEEECTTSSCEEEEECTTTC
T ss_pred CCCCcEEEEEEECCCCcccccEEeCCCCCceEcceEECCCCeEEEEECCCCCeEEEEEECCCC
Confidence 369999998 45 222222 23446788999999888887788 5666665443
No 163
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.42 E-value=6.8e-12 Score=77.73 Aligned_cols=106 Identities=12% Similarity=-0.010 Sum_probs=76.1
Q ss_pred eEEEcCCCC--EEEEEcCCCcEEEEEcCCCCCcEEEeeccCCeeEEEEccCCCEEEEeeCC----CcEEEeeCCCCCceE
Q 045566 3 CSTWKDDGT--TVFSGGCDKQVKMWPLLSGGQPVTVAMHDAPIKEVAWIPEMNLLATGSWD----KTLKYWDTRQPNPVH 76 (112)
Q Consensus 3 ~~~~~~~~~--~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~----~~i~~w~~~~~~~~~ 76 (112)
..+|+|+++ .+++++.+ .+.+||+.+++...... +.. .++.|+|+|+.++.++.+ +.|++||+.+++...
T Consensus 114 ~~~~s~dg~~~~~~s~~~~-~~~l~d~~~g~~~~l~~-~~~--~~~~~spDG~~la~~~~~~~~~~~i~~~d~~~g~~~~ 189 (582)
T 3o4h_A 114 ILSGVDTGEAVVFTGATED-RVALYALDGGGLRELAR-LPG--FGFVSDIRGDLIAGLGFFGGGRVSLFTSNLSSGGLRV 189 (582)
T ss_dssp EEEEEECSSCEEEEEECSS-CEEEEEEETTEEEEEEE-ESS--CEEEEEEETTEEEEEEEEETTEEEEEEEETTTCCCEE
T ss_pred eeeeCCCCCeEEEEecCCC-CceEEEccCCcEEEeec-CCC--ceEEECCCCCEEEEEEEcCCCCeEEEEEcCCCCCceE
Confidence 357888775 34444444 45599988765443333 333 789999999999977766 779999998776543
Q ss_pred Eec--CCCeEEEEeeCCCEEEEEeCCC--cEEEEECcCCC
Q 045566 77 TQQ--LPDRCYALTVRYPLMVVGTADR--NLVVFNLQNPQ 112 (112)
Q Consensus 77 ~~~--~~~~~~~~~~~~~~~~~~~~d~--~v~~~d~~~~~ 112 (112)
... ......+|+|+|+.++++..++ .|++||+.+++
T Consensus 190 l~~~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~ 229 (582)
T 3o4h_A 190 FDSGEGSFSSASISPGMKVTAGLETAREARLVTVDPRDGS 229 (582)
T ss_dssp ECCSSCEEEEEEECTTSCEEEEEECSSCEEEEEECTTTCC
T ss_pred eecCCCccccceECCCCCEEEEccCCCeeEEEEEcCCCCc
Confidence 222 2346789999999999888888 89999988753
No 164
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.42 E-value=2.6e-11 Score=71.38 Aligned_cols=108 Identities=18% Similarity=0.104 Sum_probs=75.9
Q ss_pred eeEEEcCCCCEEEEEc-CCCcEEEEEcC-CCCCcE--EEe--eccCCeeEEEEccCCCEEEEeeC-CCcEEEeeCC--CC
Q 045566 2 LCSTWKDDGTTVFSGG-CDKQVKMWPLL-SGGQPV--TVA--MHDAPIKEVAWIPEMNLLATGSW-DKTLKYWDTR--QP 72 (112)
Q Consensus 2 ~~~~~~~~~~~l~~~~-~~~~v~~~~~~-~~~~~~--~~~--~~~~~v~~~~~~~~~~~~~~~~~-~~~i~~w~~~--~~ 72 (112)
.+++|+|+|++++++. .++.|.+|++. +++... .+. .+...+..++|+|++++++.++. ++.+.+|++. ++
T Consensus 148 ~~~~~spdG~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g 227 (365)
T 1jof_A 148 HGMVFDPTETYLYSADLTANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAGNRICEYVIDPATH 227 (365)
T ss_dssp EEEEECTTSSEEEEEETTTTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTTC
T ss_pred eEEEECCCCCEEEEEcCCCCEEEEEEECCCCCEEEeeeEecCCCCCCCCEeEECCCCCEEEEEECCCCeEEEEEEeCCCC
Confidence 4789999999888765 46799999987 555322 222 13566889999999998877664 7889999765 34
Q ss_pred Cce---EE---ecC-------------CCeEEE-EeeCCCEEEEEeCCC------cEEEEECc
Q 045566 73 NPV---HT---QQL-------------PDRCYA-LTVRYPLMVVGTADR------NLVVFNLQ 109 (112)
Q Consensus 73 ~~~---~~---~~~-------------~~~~~~-~~~~~~~~~~~~~d~------~v~~~d~~ 109 (112)
+.. .. +.. ....++ |+|+++++++++.+. .|.+|++.
T Consensus 228 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~~~~~~~~~i~v~~~~ 290 (365)
T 1jof_A 228 MPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASSRANKFELQGYIAGFKLR 290 (365)
T ss_dssp CEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEEC
T ss_pred cEEEccceEEcCCCCcCCcccccccccccccEEEECCCCCEEEEECCCCCCCCCCeEEEEEEC
Confidence 321 11 111 134678 999999888776533 79999985
No 165
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.40 E-value=4.9e-12 Score=74.46 Aligned_cols=109 Identities=3% Similarity=-0.047 Sum_probs=76.6
Q ss_pred eeEEEcCCCCEEEEEcCCCcEEEEEcC-CCCCcEEEeec-cCCeeEEEEccCCCE--EEEee-------------CCCcE
Q 045566 2 LCSTWKDDGTTVFSGGCDKQVKMWPLL-SGGQPVTVAMH-DAPIKEVAWIPEMNL--LATGS-------------WDKTL 64 (112)
Q Consensus 2 ~~~~~~~~~~~l~~~~~~~~v~~~~~~-~~~~~~~~~~~-~~~v~~~~~~~~~~~--~~~~~-------------~~~~i 64 (112)
..++|+|+++++++++.+ .+.+|++. +++........ .+....++|+|+++. ++++. .++.+
T Consensus 43 ~~~a~spdg~~l~~~~~~-~v~~~~~~~~g~~~~~~~~~~~g~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~g~v 121 (365)
T 1jof_A 43 SWMTFDHERKNIYGAAMK-KWSSFAVKSPTEIVHEASHPIGGHPRANDADTNTRAIFLLAAKQPPYAVYANPFYKFAGYG 121 (365)
T ss_dssp SEEEECTTSSEEEEEEBT-EEEEEEEEETTEEEEEEEEECCSSGGGGCTTSCCEEEEEEECSSTTCCEEEEEESSSCCEE
T ss_pred cEEEECCCCCEEEEEccc-eEEEEEECCCCCEEEeeEeecCCCCccEEECCCCCEEEEEEecCCcceeccceeecCCceE
Confidence 468999999999988887 99999986 55443222211 123556889999984 44553 68899
Q ss_pred EEeeCCC-CCceEEe-------cCCCeEEEEeeCCCEEEEEeC-CCcEEEEECc-CC
Q 045566 65 KYWDTRQ-PNPVHTQ-------QLPDRCYALTVRYPLMVVGTA-DRNLVVFNLQ-NP 111 (112)
Q Consensus 65 ~~w~~~~-~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~-d~~v~~~d~~-~~ 111 (112)
.+|++.. ++..... ......+.|+|++++++++.. ++.|.+||+. ++
T Consensus 122 ~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~v~~~~~~~~g 178 (365)
T 1jof_A 122 NVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSADLTANKLWTHRKLASG 178 (365)
T ss_dssp EEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTS
T ss_pred EEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCEEEEEcCCCCEEEEEEECCCC
Confidence 9999974 4432222 123467889999998887764 6789999987 44
No 166
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.37 E-value=1.3e-10 Score=66.18 Aligned_cols=106 Identities=11% Similarity=0.061 Sum_probs=78.7
Q ss_pred eeEEEcCCCCEEEEEcCCCcEEEEEcCCCCCcEEEeec--cCCeeEEEEccCCCEEEEeeCCC-cEEEeeCCCCCceEEe
Q 045566 2 LCSTWKDDGTTVFSGGCDKQVKMWPLLSGGQPVTVAMH--DAPIKEVAWIPEMNLLATGSWDK-TLKYWDTRQPNPVHTQ 78 (112)
Q Consensus 2 ~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~--~~~v~~~~~~~~~~~~~~~~~~~-~i~~w~~~~~~~~~~~ 78 (112)
..++++++++.+++...++.|.+|+. .++....+... ......+++++++.++++...++ .|.+|+.. ++.+..+
T Consensus 167 ~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~~-g~~~~~~ 244 (286)
T 1q7f_A 167 NGVVVNDKQEIFISDNRAHCVKVFNY-EGQYLRQIGGEGITNYPIGVGINSNGEILIADNHNNFNLTIFTQD-GQLISAL 244 (286)
T ss_dssp EEEEECSSSEEEEEEGGGTEEEEEET-TCCEEEEESCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEECTT-SCEEEEE
T ss_pred EEEEECCCCCEEEEECCCCEEEEEcC-CCCEEEEEccCCccCCCcEEEECCCCCEEEEeCCCCEEEEEECCC-CCEEEEE
Confidence 46899999998888788899999996 44544455433 25678999999999888887775 99999964 4444443
Q ss_pred cCC-----CeEEEEeeCCCEEEEEeCCCcEEEEECcC
Q 045566 79 QLP-----DRCYALTVRYPLMVVGTADRNLVVFNLQN 110 (112)
Q Consensus 79 ~~~-----~~~~~~~~~~~~~~~~~~d~~v~~~d~~~ 110 (112)
... ...++++++++++++ +.++.|++|++..
T Consensus 245 ~~~~~~~~~~~i~~~~~g~l~vs-~~~~~v~v~~~~~ 280 (286)
T 1q7f_A 245 ESKVKHAQCFDVALMDDGSVVLA-SKDYRLYIYRYVQ 280 (286)
T ss_dssp EESSCCSCEEEEEEETTTEEEEE-ETTTEEEEEECSC
T ss_pred cccCCCCcceeEEECCCCcEEEE-CCCCeEEEEEccc
Confidence 221 246888999876655 6799999999865
No 167
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.36 E-value=2.1e-11 Score=71.90 Aligned_cols=109 Identities=14% Similarity=0.078 Sum_probs=78.1
Q ss_pred EEEcCCCCEEEEEcC-CC--cEEEEEcCCCCCcEEEeeccCCeeEEEEccCCCEEEEeeCCCcEEEeeCCCCCceEEecC
Q 045566 4 STWKDDGTTVFSGGC-DK--QVKMWPLLSGGQPVTVAMHDAPIKEVAWIPEMNLLATGSWDKTLKYWDTRQPNPVHTQQL 80 (112)
Q Consensus 4 ~~~~~~~~~l~~~~~-~~--~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~ 80 (112)
.+|+|+|+.|+.++. ++ .+.+||+.+++.......+...+....|+|+++.++.+..++.+++||+.+++.......
T Consensus 41 ~~~SpDg~~l~~~~~~~g~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~g~~~~~~~~ 120 (388)
T 3pe7_A 41 KCFTRDGSKLLFGGAFDGPWNYYLLDLNTQVATQLTEGRGDNTFGGFLSPDDDALFYVKDGRNLMRVDLATLEENVVYQV 120 (388)
T ss_dssp CCBCTTSCEEEEEECTTSSCEEEEEETTTCEEEECCCSSCBCSSSCEECTTSSEEEEEETTTEEEEEETTTCCEEEEEEC
T ss_pred ccCCCCCCEEEEEEcCCCCceEEEEeCCCCceEEeeeCCCCCccceEEcCCCCEEEEEeCCCeEEEEECCCCcceeeeec
Confidence 679999999888876 66 488888877665444444444444678999999999999899999999998876554443
Q ss_pred CCe-----EEEEeeCCCEEEEE----------------------eCCCcEEEEECcCCC
Q 045566 81 PDR-----CYALTVRYPLMVVG----------------------TADRNLVVFNLQNPQ 112 (112)
Q Consensus 81 ~~~-----~~~~~~~~~~~~~~----------------------~~d~~v~~~d~~~~~ 112 (112)
+.. ...+++++..++.. ..+..|.+||+.+++
T Consensus 121 ~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~ 179 (388)
T 3pe7_A 121 PAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGE 179 (388)
T ss_dssp CTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTCC
T ss_pred hhhcccccceeECCCCCeeccccccCcccccccccchhhhhhccCCcceEEEEECCCCc
Confidence 321 12347788877643 234678899988764
No 168
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.36 E-value=9.5e-12 Score=79.12 Aligned_cols=96 Identities=10% Similarity=-0.001 Sum_probs=71.9
Q ss_pred eEEEcCCCCEEEEEcCC---------CcEEEEEcCCCCCcEEEeeccCCeeEEEEccCCCEEEEeeCCCcEEEeeCCCCC
Q 045566 3 CSTWKDDGTTVFSGGCD---------KQVKMWPLLSGGQPVTVAMHDAPIKEVAWIPEMNLLATGSWDKTLKYWDTRQPN 73 (112)
Q Consensus 3 ~~~~~~~~~~l~~~~~~---------~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~ 73 (112)
.++|||||++++.++.+ +.+.+||+.+++.. .+..+...+...+|+|+|+.++.+ .++.|++|+..+++
T Consensus 66 ~~~~Spdg~~l~~~~~~~~~~r~~~~~~~~~~d~~~~~~~-~l~~~~~~~~~~~~SPdG~~la~~-~~~~i~~~~~~~~~ 143 (740)
T 4a5s_A 66 DYSISPDGQFILLEYNYVKQWRHSYTASYDIYDLNKRQLI-TEERIPNNTQWVTWSPVGHKLAYV-WNNDIYVKIEPNLP 143 (740)
T ss_dssp EEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEEC-CSSCCCTTEEEEEECSSTTCEEEE-ETTEEEEESSTTSC
T ss_pred ceEECCCCCEEEEEECCeeeEEEccceEEEEEECCCCcEE-EcccCCCcceeeEECCCCCEEEEE-ECCeEEEEECCCCc
Confidence 47899999999988875 55679999877643 345566789999999999998877 56899999998766
Q ss_pred ceEEec-C--------------------CCeEEEEeeCCCEEEEEeCC
Q 045566 74 PVHTQQ-L--------------------PDRCYALTVRYPLMVVGTAD 100 (112)
Q Consensus 74 ~~~~~~-~--------------------~~~~~~~~~~~~~~~~~~~d 100 (112)
..+.-. . ....+.|+|+|+.|+..+.|
T Consensus 144 ~~~lt~~g~~~~~~~g~~~~v~~ee~~~~~~~~~wSpDg~~la~~~~d 191 (740)
T 4a5s_A 144 SYRITWTGKEDIIYNGITDWVYEEEVFSAYSALWWSPNGTFLAYAQFN 191 (740)
T ss_dssp CEECCSCCBTTTEEESBCCHHHHHHTSSSSBCEEECTTSSEEEEEEEE
T ss_pred eEEEcCCCCccceecCcccccccchhcCCCcceEECCCCCEEEEEEEc
Confidence 443211 1 11347899999988887543
No 169
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.35 E-value=3.5e-11 Score=76.27 Aligned_cols=108 Identities=13% Similarity=0.127 Sum_probs=78.3
Q ss_pred eeEEEcCCCCEEEEEcCCC-----cEEEEEcCCCCCcEEEeeccCCeeEEEEccCCCEEEEeeCCCc-------------
Q 045566 2 LCSTWKDDGTTVFSGGCDK-----QVKMWPLLSGGQPVTVAMHDAPIKEVAWIPEMNLLATGSWDKT------------- 63 (112)
Q Consensus 2 ~~~~~~~~~~~l~~~~~~~-----~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~------------- 63 (112)
..++|||+|++|+.+..++ .|++||+.+++....... ...+..++|+|+++.++.+..++.
T Consensus 128 ~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg~~~~~~~~-~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~ 206 (710)
T 2xdw_A 128 RGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVLE-RVKFSCMAWTHDGKGMFYNAYPQQDGKSDGTETSTNL 206 (710)
T ss_dssp EEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEEEEE-EECSCCEEECTTSSEEEEEECCCCSSCCSSSCCCCCC
T ss_pred EEEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCccccc-CcccceEEEEeCCCEEEEEEECCccccccccccccCC
Confidence 4678999999998765433 899999988776543222 223667999999999888877655
Q ss_pred ---EEEeeCCCCCc--eEEecC---C--CeEEEEeeCCCEEEEEeC-----CCcEEEEECcC
Q 045566 64 ---LKYWDTRQPNP--VHTQQL---P--DRCYALTVRYPLMVVGTA-----DRNLVVFNLQN 110 (112)
Q Consensus 64 ---i~~w~~~~~~~--~~~~~~---~--~~~~~~~~~~~~~~~~~~-----d~~v~~~d~~~ 110 (112)
|++|++.+++. ...+.. + .....++|++++++..+. +..+.+||+.+
T Consensus 207 ~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~ 268 (710)
T 2xdw_A 207 HQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQ 268 (710)
T ss_dssp CCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGG
T ss_pred CCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcc
Confidence 99999987653 222222 1 246789999998887764 56799999875
No 170
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.35 E-value=3.6e-11 Score=75.37 Aligned_cols=108 Identities=16% Similarity=0.153 Sum_probs=76.0
Q ss_pred eeEEEcCCCCEEEEEcCC--------CcEEEEEcC-CCC--CcEEE-eeccCCeeEEEEccCCCEEEEeeCCC--cEEEe
Q 045566 2 LCSTWKDDGTTVFSGGCD--------KQVKMWPLL-SGG--QPVTV-AMHDAPIKEVAWIPEMNLLATGSWDK--TLKYW 67 (112)
Q Consensus 2 ~~~~~~~~~~~l~~~~~~--------~~v~~~~~~-~~~--~~~~~-~~~~~~v~~~~~~~~~~~~~~~~~~~--~i~~w 67 (112)
..++|+|||++|+.++.+ ..|.+||+. ++. ....+ ..+...+..+.|+|+|++++++..++ .|..|
T Consensus 191 ~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~~~~~~~~spdg~l~~~~~~~~~~~l~~~ 270 (662)
T 3azo_A 191 TGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGPEEAIAQAEWAPDGSLIVATDRTGWWNLHRV 270 (662)
T ss_dssp CCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEETTBCEEEEEECTTSCEEEEECTTSSCEEEEE
T ss_pred cCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCCCceEcceEECCCCeEEEEECCCCCeEEEEE
Confidence 357899999999877754 379999988 451 33333 34467889999999999888888787 56666
Q ss_pred eCCCCCceEEecCC-----------CeEEEEeeCCCEEEEEeCCCcEEEE--ECcC
Q 045566 68 DTRQPNPVHTQQLP-----------DRCYALTVRYPLMVVGTADRNLVVF--NLQN 110 (112)
Q Consensus 68 ~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~d~~v~~~--d~~~ 110 (112)
|+.+++........ ...+.+++++.++++++. +.+++| |+..
T Consensus 271 ~~~~~~~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~d~~~ 325 (662)
T 3azo_A 271 DPATGAATQLCRREEEFAGPLWTPGMRWFAPLANGLIAVVHGK-GAAVLGILDPES 325 (662)
T ss_dssp CTTTCCEEESSCCSSBSSCCCCSTTCCSEEECTTSCEEEEEBS-SSCEEEEEETTT
T ss_pred ECCCCceeecccccccccCccccccCceEeEeCCCEEEEEEEc-CccEEEEEECCC
Confidence 66555433221111 345778888999999888 888888 5443
No 171
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.31 E-value=2.4e-11 Score=76.81 Aligned_cols=108 Identities=11% Similarity=0.020 Sum_probs=75.6
Q ss_pred eeEEEcCCCCEEE-----EEcCCCcEEEEEcCCCCCc-EEEeeccCCeeEEEEccCCCEEEEeeCCCc------------
Q 045566 2 LCSTWKDDGTTVF-----SGGCDKQVKMWPLLSGGQP-VTVAMHDAPIKEVAWIPEMNLLATGSWDKT------------ 63 (112)
Q Consensus 2 ~~~~~~~~~~~l~-----~~~~~~~v~~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~------------ 63 (112)
..++|||+|++|+ .|+.+..|++||+.+++.. .... .......++|+|+++.++.+..+..
T Consensus 124 ~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~tg~~~~~~~~-~~~~~~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~ 202 (695)
T 2bkl_A 124 GTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDSGEWSKVDVI-EGGKYATPKWTPDSKGFYYEWLPTDPSIKVDERPGYT 202 (695)
T ss_dssp EEEEECTTSSEEEEEEEETTCSCCEEEEEETTTCCBCSSCCB-SCCTTCCCEECTTSSEEEEEECCCCTTSCGGGGGGGC
T ss_pred EEEEECCCCCEEEEEECCCCCceEEEEEEECCCCCCcCCccc-CcccccceEEecCCCEEEEEEecCCCCCccccCCCCC
Confidence 4679999999998 3445678999999888764 2111 1111267899999999988887665
Q ss_pred -EEEeeCCCCCc--eEEecC-----CCeEEEEeeCCCEEEEEeCCC----cEEEEECcC
Q 045566 64 -LKYWDTRQPNP--VHTQQL-----PDRCYALTVRYPLMVVGTADR----NLVVFNLQN 110 (112)
Q Consensus 64 -i~~w~~~~~~~--~~~~~~-----~~~~~~~~~~~~~~~~~~~d~----~v~~~d~~~ 110 (112)
|++|++.+++. ...+.. ......++|+|++++..+.++ .|.++|..+
T Consensus 203 ~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~ 261 (695)
T 2bkl_A 203 TIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYILRGWSENDVYWKRPGE 261 (695)
T ss_dssp EEEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEEEETTTEEEEEEECTTC
T ss_pred EEEEEECCCCchhceEEEecCCCCEEEEEEEECCCCCEEEEEEeCCCCceEEEEEcCCC
Confidence 99999987752 222222 234678999999888877655 566666543
No 172
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.30 E-value=3.8e-11 Score=70.85 Aligned_cols=101 Identities=12% Similarity=0.138 Sum_probs=78.6
Q ss_pred CCCEEEEEc------CCCcEEEEEcCCCCCcEEEeeccCCeeEEEEccCCCEEEEee----------CCCcEEEeeCCCC
Q 045566 9 DGTTVFSGG------CDKQVKMWPLLSGGQPVTVAMHDAPIKEVAWIPEMNLLATGS----------WDKTLKYWDTRQP 72 (112)
Q Consensus 9 ~~~~l~~~~------~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~----------~~~~i~~w~~~~~ 72 (112)
+++++++.. .|+.|.+||..+++...++.....+ .++++|++++++.+. .++.|.+||..+.
T Consensus 14 ~~~~~yv~~~~~~~~~d~~v~v~D~~t~~~~~~i~~g~~p--~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~ 91 (361)
T 2oiz_A 14 QENRIYVMDSVFMHLTESRVHVYDYTNGKFLGMVPTAFNG--HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKL 91 (361)
T ss_dssp GGGEEEEEECCGGGGGGCEEEEEETTTCCEEEEEECCEEE--EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTC
T ss_pred CCCEEEEECCCCCccccCeEEEEECCCCeEEEEecCCCCC--ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCC
Confidence 566676653 3679999999888877777655444 899999999888876 2567999999988
Q ss_pred CceEEecC---------CCeEEEEeeCCCEEEEEeC--CCcEEEEECcCC
Q 045566 73 NPVHTQQL---------PDRCYALTVRYPLMVVGTA--DRNLVVFNLQNP 111 (112)
Q Consensus 73 ~~~~~~~~---------~~~~~~~~~~~~~~~~~~~--d~~v~~~d~~~~ 111 (112)
+.+..+.. ....++++|+++++++++. ++.|.+||+.++
T Consensus 92 ~~~~~i~~~~~~~~~g~~p~~i~~spdg~~l~v~n~~~~~~v~v~d~~~~ 141 (361)
T 2oiz_A 92 TFEKEISLPPKRVQGLNYDGLFRQTTDGKFIVLQNASPATSIGIVDVAKG 141 (361)
T ss_dssp CEEEEEEECTTBCCBCCCGGGEEECTTSSEEEEEEESSSEEEEEEETTTT
T ss_pred cEEEEEEcCccccccCCCcceEEECCCCCEEEEECCCCCCeEEEEECCCC
Confidence 87766542 2356899999999999874 578999999875
No 173
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.29 E-value=8.2e-10 Score=64.04 Aligned_cols=109 Identities=6% Similarity=-0.128 Sum_probs=78.2
Q ss_pred eeEEEcCCCCEEEEEcCCCcEEEEEcCCCCCcEEEeeccCCeeEEEEccCCCEEEEeeCC----CcEEEeeCCCCCceEE
Q 045566 2 LCSTWKDDGTTVFSGGCDKQVKMWPLLSGGQPVTVAMHDAPIKEVAWIPEMNLLATGSWD----KTLKYWDTRQPNPVHT 77 (112)
Q Consensus 2 ~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~----~~i~~w~~~~~~~~~~ 77 (112)
.+++|+|++++++++..++.|.+||..+++.......+...+.++++++++.++++...+ +.|.+||..+.+....
T Consensus 48 ~~~~~~~~g~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~~~~~~ 127 (333)
T 2dg1_A 48 EGLNFDRQGQLFLLDVFEGNIFKINPETKEIKRPFVSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDNLQDI 127 (333)
T ss_dssp EEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCSCEEE
T ss_pred cCcEECCCCCEEEEECCCCEEEEEeCCCCcEEEEeeCCCCCcceEEECCCCcEEEEeCCCCCCCceEEEEeCCCCEEEEE
Confidence 467899999988888889999999987666543333456779999999999988877666 6899999887654422
Q ss_pred ec-----CCCeEEEEeeCCCEEEEEeC------CCcEEEEECcC
Q 045566 78 QQ-----LPDRCYALTVRYPLMVVGTA------DRNLVVFNLQN 110 (112)
Q Consensus 78 ~~-----~~~~~~~~~~~~~~~~~~~~------d~~v~~~d~~~ 110 (112)
.. .....+.+++++..+++... .+.|..+|..+
T Consensus 128 ~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~ 171 (333)
T 2dg1_A 128 IEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDF 171 (333)
T ss_dssp ECSSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTS
T ss_pred EccCccCCcccceEECCCCCEEEEeccccccCCCceEEEEeCCC
Confidence 22 12356788888887766543 34566666543
No 174
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.28 E-value=7.8e-10 Score=64.39 Aligned_cols=108 Identities=10% Similarity=-0.042 Sum_probs=81.0
Q ss_pred CeeEEEcCCCCEEEEEcCC------------------------CcEEEEEcCCCCCcEEEe-eccCCeeEEEEccCCCEE
Q 045566 1 VLCSTWKDDGTTVFSGGCD------------------------KQVKMWPLLSGGQPVTVA-MHDAPIKEVAWIPEMNLL 55 (112)
Q Consensus 1 v~~~~~~~~~~~l~~~~~~------------------------~~v~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~ 55 (112)
+.+++++|+|+++++...+ +.|.+||..+++...... .+......+++++++.++
T Consensus 26 v~~va~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~p~gia~d~~g~l~ 105 (329)
T 3fvz_A 26 VSGVALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQSSGKNLFYLPHGLSIDTDGNYW 105 (329)
T ss_dssp EEEEEECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEEECTTTCSSEEEEEECTTSCEE
T ss_pred ceEEEECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEeccCCCccCCceEEEECCCCCEE
Confidence 3579999999999888776 479999987777654443 233567899999999988
Q ss_pred EEeeCCCcEEEeeCCCCC-ceEEecC------------CCeEEEEee-CCCEEEEEe-CCCcEEEEEC
Q 045566 56 ATGSWDKTLKYWDTRQPN-PVHTQQL------------PDRCYALTV-RYPLMVVGT-ADRNLVVFNL 108 (112)
Q Consensus 56 ~~~~~~~~i~~w~~~~~~-~~~~~~~------------~~~~~~~~~-~~~~~~~~~-~d~~v~~~d~ 108 (112)
++...++.|+.|+..... .+..+.. ....+++++ ++..+++.+ .++.|++||.
T Consensus 106 v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~~ 173 (329)
T 3fvz_A 106 VTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSRIVQFSP 173 (329)
T ss_dssp EEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCCEEEEECT
T ss_pred EEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCCeEEEEcC
Confidence 888889999999986542 3443321 235788998 777777775 6889999983
No 175
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.27 E-value=1.6e-09 Score=63.11 Aligned_cols=109 Identities=14% Similarity=0.057 Sum_probs=80.4
Q ss_pred eeEEEcCCCCEEEEEcCCCcEEEEEcCCCC-CcEEEe---------eccCCeeEEEEcc-CCCEEEEee-CCCcEEEeeC
Q 045566 2 LCSTWKDDGTTVFSGGCDKQVKMWPLLSGG-QPVTVA---------MHDAPIKEVAWIP-EMNLLATGS-WDKTLKYWDT 69 (112)
Q Consensus 2 ~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~-~~~~~~---------~~~~~v~~~~~~~-~~~~~~~~~-~~~~i~~w~~ 69 (112)
..++++|+|+.+++...++.|++|+..... .+..+. .+......++++| ++.++++.+ .++.|.+|+.
T Consensus 94 ~gia~d~~g~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~~ 173 (329)
T 3fvz_A 94 HGLSIDTDGNYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSRIVQFSP 173 (329)
T ss_dssp EEEEECTTSCEEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCCEEEEECT
T ss_pred eEEEECCCCCEEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCCeEEEEcC
Confidence 468999999988888889999999975432 444442 2334678999999 888888886 6899999994
Q ss_pred CCCCceEEecC-------------CCeEEEEeeC-CCEEEEEeCCCcEEEEECcCC
Q 045566 70 RQPNPVHTQQL-------------PDRCYALTVR-YPLMVVGTADRNLVVFNLQNP 111 (112)
Q Consensus 70 ~~~~~~~~~~~-------------~~~~~~~~~~-~~~~~~~~~d~~v~~~d~~~~ 111 (112)
+++.+..+.. ....++++++ +..+++...++.|++||..++
T Consensus 174 -~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G 228 (329)
T 3fvz_A 174 -SGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTK 228 (329)
T ss_dssp -TSCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTC
T ss_pred -CCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCC
Confidence 4554444321 1357889998 666677777889999998754
No 176
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.25 E-value=9.9e-10 Score=68.41 Aligned_cols=103 Identities=9% Similarity=0.020 Sum_probs=81.2
Q ss_pred CCCEEEEEcCCCcEEEEEcCCCCCcEEEeeccCCeeEEEEccCCCEEEEeeCCCcEEEeeCC--CCCceEEecCCC--eE
Q 045566 9 DGTTVFSGGCDKQVKMWPLLSGGQPVTVAMHDAPIKEVAWIPEMNLLATGSWDKTLKYWDTR--QPNPVHTQQLPD--RC 84 (112)
Q Consensus 9 ~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~--~~~~~~~~~~~~--~~ 84 (112)
.+..+++...++.|.++|..+++.+.++.. ...+..+.++|+++++++++.++.|.+||+. +.+.+..+.... ..
T Consensus 166 ~~~~~V~~~~~~~V~viD~~t~~v~~~i~~-g~~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v~~i~~G~~P~~ 244 (567)
T 1qks_A 166 ENLFSVTLRDAGQIALIDGSTYEIKTVLDT-GYAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKIGSEARS 244 (567)
T ss_dssp GGEEEEEETTTTEEEEEETTTCCEEEEEEC-SSCEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEECCSEEEE
T ss_pred CceEEEEeCCCCeEEEEECCCCeEEEEEeC-CCCccceEECCCCCEEEEEcCCCeEEEEECCCCCCcEeEEEecCCCCce
Confidence 345667777889999999998888777763 3456789999999999999999999999995 666666665433 56
Q ss_pred EEEe----eCCCEEEEEeC-CCcEEEEECcCCC
Q 045566 85 YALT----VRYPLMVVGTA-DRNLVVFNLQNPQ 112 (112)
Q Consensus 85 ~~~~----~~~~~~~~~~~-d~~v~~~d~~~~~ 112 (112)
+.++ |+++++++++. ++.+.++|..+.+
T Consensus 245 ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~ 277 (567)
T 1qks_A 245 IETSKMEGWEDKYAIAGAYWPPQYVIMDGETLE 277 (567)
T ss_dssp EEECCSTTCTTTEEEEEEEETTEEEEEETTTCC
T ss_pred eEEccccCCCCCEEEEEEccCCeEEEEECCCCc
Confidence 7888 69998888766 5889999987653
No 177
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.24 E-value=7.3e-10 Score=64.50 Aligned_cols=97 Identities=11% Similarity=0.075 Sum_probs=67.1
Q ss_pred CeeEEEcCCCCEEEEEcCC---C--cEEEEEcCCCCCcEEEeeccCCeeEEEEccCCCEEEEeeCC--------------
Q 045566 1 VLCSTWKDDGTTVFSGGCD---K--QVKMWPLLSGGQPVTVAMHDAPIKEVAWIPEMNLLATGSWD-------------- 61 (112)
Q Consensus 1 v~~~~~~~~~~~l~~~~~~---~--~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~-------------- 61 (112)
+..++|+|+|+.|+..+.+ + .|.++++.+++...... ... +..+.|+|+++.++.+..+
T Consensus 61 ~~~~~~SpDg~~la~~~~~~~~~~~~l~~~~~~~g~~~~l~~-~~~-~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~ 138 (347)
T 2gop_A 61 ATMPRISPDGKKIAFMRANEEKKVSEIWVADLETLSSKKILE-AKN-IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVP 138 (347)
T ss_dssp CEEEEECTTSSEEEEEEEETTTTEEEEEEEETTTTEEEEEEE-ESE-EEEEEECTTSSEEEEEEECCCC---------CC
T ss_pred CCCeEECCCCCEEEEEEeccCCCcceEEEEECCCCceEEEEc-CCC-ccceeECCCCCEEEEEEccCCCcCCcEEEcccc
Confidence 3568999999998877653 3 37777877655433333 333 8999999999988776532
Q ss_pred -------------CcEEEeeCCCCCceEEec-CCCeEEEEeeCCCEEEEEeCC
Q 045566 62 -------------KTLKYWDTRQPNPVHTQQ-LPDRCYALTVRYPLMVVGTAD 100 (112)
Q Consensus 62 -------------~~i~~w~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~d 100 (112)
..+.+||+.+++.+..+. .....+.|+|++ +++++..+
T Consensus 139 ~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~spdg-~~~~~~~~ 190 (347)
T 2gop_A 139 AWFDDLGFFDGEKTTFWIFDTESEEVIEEFEKPRFSSGIWHRDK-IVVNVPHR 190 (347)
T ss_dssp CC---------CEEEEEEEETTTTEEEEEEEEETTCEEEEETTE-EEEEEECC
T ss_pred eeecCcccccCccceEEEEECCCCeEEeeecCCCcccccCCCCe-EEEEEecc
Confidence 468899998775522221 156778899999 77777654
No 178
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.23 E-value=1.7e-09 Score=61.51 Aligned_cols=106 Identities=9% Similarity=0.054 Sum_probs=79.6
Q ss_pred eeEEEcCCCCEEEEEcCCCcEEEEEcCCCCCcEEEe--eccCCeeEEEEccCCCEEEEeeCCCcEEEeeCCCCCceEEec
Q 045566 2 LCSTWKDDGTTVFSGGCDKQVKMWPLLSGGQPVTVA--MHDAPIKEVAWIPEMNLLATGSWDKTLKYWDTRQPNPVHTQQ 79 (112)
Q Consensus 2 ~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~ 79 (112)
..++++|+++.+++...++.|.+|+.. ++....+. .+...+..+++++++..+++...++.|.+|+.. ++.+..+.
T Consensus 124 ~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~ 201 (286)
T 1q7f_A 124 RGVTVDNKGRIIVVECKVMRVIIFDQN-GNVLHKFGCSKHLEFPNGVVVNDKQEIFISDNRAHCVKVFNYE-GQYLRQIG 201 (286)
T ss_dssp EEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEEECTTTCSSEEEEEECSSSEEEEEEGGGTEEEEEETT-CCEEEEES
T ss_pred eEEEEeCCCCEEEEECCCCEEEEEcCC-CCEEEEeCCCCccCCcEEEEECCCCCEEEEECCCCEEEEEcCC-CCEEEEEc
Confidence 468899999988888888999999953 44444443 234567899999999988888889999999974 44444443
Q ss_pred C-----CCeEEEEeeCCCEEEEEeCCC-cEEEEECc
Q 045566 80 L-----PDRCYALTVRYPLMVVGTADR-NLVVFNLQ 109 (112)
Q Consensus 80 ~-----~~~~~~~~~~~~~~~~~~~d~-~v~~~d~~ 109 (112)
. ....+++++++.++++...++ .|.+||..
T Consensus 202 ~~g~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~~ 237 (286)
T 1q7f_A 202 GEGITNYPIGVGINSNGEILIADNHNNFNLTIFTQD 237 (286)
T ss_dssp CTTTSCSEEEEEECTTCCEEEEECSSSCEEEEECTT
T ss_pred cCCccCCCcEEEECCCCCEEEEeCCCCEEEEEECCC
Confidence 2 235788899998888777775 99999853
No 179
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.23 E-value=1.3e-09 Score=67.88 Aligned_cols=75 Identities=16% Similarity=0.161 Sum_probs=58.6
Q ss_pred eeEEEcCCCCEEEEEcCCCcEEEEEcC--CCCCcEEEeeccCCeeEEEEc----cCCCEEEEeeC-CCcEEEeeCCCCCc
Q 045566 2 LCSTWKDDGTTVFSGGCDKQVKMWPLL--SGGQPVTVAMHDAPIKEVAWI----PEMNLLATGSW-DKTLKYWDTRQPNP 74 (112)
Q Consensus 2 ~~~~~~~~~~~l~~~~~~~~v~~~~~~--~~~~~~~~~~~~~~v~~~~~~----~~~~~~~~~~~-~~~i~~w~~~~~~~ 74 (112)
..+.|+|+|+++++++.++.|.+||+. +.+...++... .....++|+ |+|++++.++. ++.+.++|..+.+.
T Consensus 200 ~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v~~i~~G-~~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~ 278 (567)
T 1qks_A 200 HISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKIG-SEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEP 278 (567)
T ss_dssp EEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEECC-SEEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCE
T ss_pred cceEECCCCCEEEEEcCCCeEEEEECCCCCCcEeEEEecC-CCCceeEEccccCCCCCEEEEEEccCCeEEEEECCCCcE
Confidence 468899999999999999999999995 66666666543 345789999 69988776654 68899999877765
Q ss_pred eEE
Q 045566 75 VHT 77 (112)
Q Consensus 75 ~~~ 77 (112)
+..
T Consensus 279 ~~~ 281 (567)
T 1qks_A 279 KKI 281 (567)
T ss_dssp EEE
T ss_pred EEE
Confidence 543
No 180
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.20 E-value=1e-09 Score=61.80 Aligned_cols=110 Identities=9% Similarity=-0.064 Sum_probs=80.5
Q ss_pred eeEEEcCCCCEEEEEcCCCcEEEEEcCCCCCcEEEeeccCCeeEEEEccCCCEEEEeeCCCcEEEeeCCCCCceEEec--
Q 045566 2 LCSTWKDDGTTVFSGGCDKQVKMWPLLSGGQPVTVAMHDAPIKEVAWIPEMNLLATGSWDKTLKYWDTRQPNPVHTQQ-- 79 (112)
Q Consensus 2 ~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~-- 79 (112)
..++++++++.+++...++.|.+|+...................+++++++..+++...++.|..|+...........
T Consensus 153 ~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~ 232 (270)
T 1rwi_B 153 DGVAVDNSGNVYVTDTDNNRVVKLEAESNNQVVLPFTDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTTSTVLPFTG 232 (270)
T ss_dssp CCEEECTTCCEEEEEGGGTEEEEECTTTCCEEECCCSSCCSEEEEEECTTCCEEEEETTTSCEEEECTTCSCCEECCCCS
T ss_pred eeEEEeCCCCEEEEECCCCEEEEEecCCCceEeecccCCCCceEEEECCCCCEEEEECCCCcEEEEcCCCCcceeeccCC
Confidence 468899999877777778899999976544322222233567899999999888887778899999987654332211
Q ss_pred -CCCeEEEEeeCCCEEEEEeCCCcEEEEECcCC
Q 045566 80 -LPDRCYALTVRYPLMVVGTADRNLVVFNLQNP 111 (112)
Q Consensus 80 -~~~~~~~~~~~~~~~~~~~~d~~v~~~d~~~~ 111 (112)
.....++++++++.+++...++.|.++++...
T Consensus 233 ~~~p~~i~~~~~g~l~v~~~~~~~v~~~~~~~~ 265 (270)
T 1rwi_B 233 LNTPLAVAVDSDRTVYVADRGNDRVVKLTSLEH 265 (270)
T ss_dssp CSCEEEEEECTTCCEEEEEGGGTEEEEECCCGG
T ss_pred CCCceeEEECCCCCEEEEECCCCEEEEEcCCCc
Confidence 12357888899988888888999999987654
No 181
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.18 E-value=6.2e-10 Score=66.28 Aligned_cols=106 Identities=13% Similarity=0.011 Sum_probs=83.8
Q ss_pred EEcCCCCEEEEEcC-----CCcEEEEEcCCCCCcEEEeeccCCeeEEEEccCCCEEEEee----------CCCcEEEeeC
Q 045566 5 TWKDDGTTVFSGGC-----DKQVKMWPLLSGGQPVTVAMHDAPIKEVAWIPEMNLLATGS----------WDKTLKYWDT 69 (112)
Q Consensus 5 ~~~~~~~~l~~~~~-----~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~----------~~~~i~~w~~ 69 (112)
...|+++.+++... ++.|.+.|..+.+.+.+++.-..+ . +.++|++++++.+. .++.|.+||.
T Consensus 39 ~~~pd~~~vyV~~~~~~~~~~~V~ViD~~t~~v~~~I~vG~~P-~-va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~ 116 (386)
T 3sjl_D 39 APAPDARRVYVNDPAHFAAVTQQFVIDGEAGRVIGMIDGGFLP-N-PVVADDGSFIAHASTVFSRIARGERTDYVEVFDP 116 (386)
T ss_dssp CCCCCTTEEEEEECGGGCSSEEEEEEETTTTEEEEEEEECSSC-E-EEECTTSSCEEEEEEEEEETTEEEEEEEEEEECT
T ss_pred ccCCCCCEEEEEcCcccCCCCEEEEEECCCCeEEEEEECCCCC-c-EEECCCCCEEEEEcccccccccCCCCCEEEEEEC
Confidence 34678988888765 578999999998888888755555 4 99999999876664 3678999999
Q ss_pred CCCCceEEecC----------CCeEEEEeeCCCEEEEEeC--CCcEEEEECcCCC
Q 045566 70 RQPNPVHTQQL----------PDRCYALTVRYPLMVVGTA--DRNLVVFNLQNPQ 112 (112)
Q Consensus 70 ~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~--d~~v~~~d~~~~~ 112 (112)
.+.+.+..+.. ....+.++|++++++++.. ++.|.++|+.+++
T Consensus 117 ~t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~~VsVID~~t~~ 171 (386)
T 3sjl_D 117 VTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKA 171 (386)
T ss_dssp TTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTTE
T ss_pred CCCeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCCCeEEEEECCCCc
Confidence 99988776642 2346899999999998874 5789999998763
No 182
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.18 E-value=8.1e-10 Score=65.21 Aligned_cols=107 Identities=9% Similarity=0.045 Sum_probs=78.3
Q ss_pred eEEEcCCCCEEEEEcC----------CCcEEEEEcCCCCCcEEEeec------cCCeeEEEEccCCCEEEEeeC--CCcE
Q 045566 3 CSTWKDDGTTVFSGGC----------DKQVKMWPLLSGGQPVTVAMH------DAPIKEVAWIPEMNLLATGSW--DKTL 64 (112)
Q Consensus 3 ~~~~~~~~~~l~~~~~----------~~~v~~~~~~~~~~~~~~~~~------~~~v~~~~~~~~~~~~~~~~~--~~~i 64 (112)
.++|+|+++++++++. ++.|.+||..+.+...++... ......++++|++++++++.. ++.|
T Consensus 54 ~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~~~i~~~~~~~~~g~~p~~i~~spdg~~l~v~n~~~~~~v 133 (361)
T 2oiz_A 54 HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLTFEKEISLPPKRVQGLNYDGLFRQTTDGKFIVLQNASPATSI 133 (361)
T ss_dssp EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCEEEEEEECTTBCCBCCCGGGEEECTTSSEEEEEEESSSEEE
T ss_pred ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCcEEEEEEcCccccccCCCcceEEECCCCCEEEEECCCCCCeE
Confidence 4789999999988863 567999999888877766532 234567999999999988764 5789
Q ss_pred EEeeCCCCCceEE-ecCCCe-EEEEeeCC-CEEEEEeCCCcEEEEECc
Q 045566 65 KYWDTRQPNPVHT-QQLPDR-CYALTVRY-PLMVVGTADRNLVVFNLQ 109 (112)
Q Consensus 65 ~~w~~~~~~~~~~-~~~~~~-~~~~~~~~-~~~~~~~~d~~v~~~d~~ 109 (112)
.+||+.+.+.+.. +..... ...+.|++ ..+++.+.|+.+.++++.
T Consensus 134 ~v~d~~~~~~~~~~i~~~~~~~v~~~p~~~~~~~~~~~dg~~~~v~~~ 181 (361)
T 2oiz_A 134 GIVDVAKGDYVEDVTAAAGCWSVIPQPNRPRSFMTICGDGGLLTINLG 181 (361)
T ss_dssp EEEETTTTEEEEEEGGGTTEEEEEECTTSSSEEEEEETTSSEEEEEEC
T ss_pred EEEECCCCcEEEEEecCCCcceeEEcCCCCeeEEEECCCCcEEEEEEC
Confidence 9999998877766 543322 23345544 566777778888777764
No 183
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.18 E-value=7.2e-10 Score=65.37 Aligned_cols=109 Identities=16% Similarity=0.101 Sum_probs=71.8
Q ss_pred eeEEEcC-CCCEEEEEcCC------CcEEEEEcCCCCCcEEEeec--cCCeeEEEEccCCCEEEEeeCC-----CcEEEe
Q 045566 2 LCSTWKD-DGTTVFSGGCD------KQVKMWPLLSGGQPVTVAMH--DAPIKEVAWIPEMNLLATGSWD-----KTLKYW 67 (112)
Q Consensus 2 ~~~~~~~-~~~~l~~~~~~------~~v~~~~~~~~~~~~~~~~~--~~~v~~~~~~~~~~~~~~~~~~-----~~i~~w 67 (112)
..+.|+| +++.++..+.+ ..|.++++..++. ..+..+ ...+..+.|+|+++.++....+ +.|.+|
T Consensus 191 ~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~-~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~ 269 (396)
T 3c5m_A 191 GHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNV-RKIKEHAEGESCTHEFWIPDGSAMAYVSYFKGQTDRVIYKA 269 (396)
T ss_dssp EEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCC-EESSCCCTTEEEEEEEECTTSSCEEEEEEETTTCCEEEEEE
T ss_pred ccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCce-eEeeccCCCccccceEECCCCCEEEEEecCCCCccceEEEE
Confidence 4578999 78877665443 3588888764443 333322 2357788999999876665433 349999
Q ss_pred eCCCCCceEEecCCCeEEEEee-CCCEEEEEe----------------CCCcEEEEECcCC
Q 045566 68 DTRQPNPVHTQQLPDRCYALTV-RYPLMVVGT----------------ADRNLVVFNLQNP 111 (112)
Q Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~----------------~d~~v~~~d~~~~ 111 (112)
|+.+++.......+.....|++ +++.++.++ .+..|++||+.++
T Consensus 270 d~~~g~~~~l~~~~~~~~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~~~ 330 (396)
T 3c5m_A 270 NPETLENEEVMVMPPCSHLMSNFDGSLMVGDGCDAPVDVADADSYNIENDPFLYVLNTKAK 330 (396)
T ss_dssp CTTTCCEEEEEECCSEEEEEECSSSSEEEEEECCC----------CCCCCCEEEEEETTTT
T ss_pred ECCCCCeEEeeeCCCCCCCccCCCCceEEEecCCcceeeccccccccCCCCcEEEEecccC
Confidence 9987765433222222378899 999887754 3467999998765
No 184
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.17 E-value=2.6e-09 Score=63.65 Aligned_cols=107 Identities=11% Similarity=0.076 Sum_probs=79.8
Q ss_pred EEEcCCCCEEEEEc----------CCCcEEEEEcCCCCCcEEEeecc-------CCeeEEEEccCCCEEEEeeC--CCcE
Q 045566 4 STWKDDGTTVFSGG----------CDKQVKMWPLLSGGQPVTVAMHD-------APIKEVAWIPEMNLLATGSW--DKTL 64 (112)
Q Consensus 4 ~~~~~~~~~l~~~~----------~~~~v~~~~~~~~~~~~~~~~~~-------~~v~~~~~~~~~~~~~~~~~--~~~i 64 (112)
++++|+|+++++++ .++.|.+||..+.+...++.... ..-..+.++|+|++++.+.. ++.|
T Consensus 83 va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~~V 162 (386)
T 3sjl_D 83 PVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAV 162 (386)
T ss_dssp EEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEE
T ss_pred EEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCCCeE
Confidence 78999999887775 35789999999988877765321 23457899999998887764 6889
Q ss_pred EEeeCCCCCceEEecCCCeEEEEeeCCCEEEEEeCCCcEEEEECcC
Q 045566 65 KYWDTRQPNPVHTQQLPDRCYALTVRYPLMVVGTADRNLVVFNLQN 110 (112)
Q Consensus 65 ~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~~~d~~~ 110 (112)
.++|..+.+.+..+..+.....+....+.+++.+.||++.+.++.+
T Consensus 163 sVID~~t~~vv~tI~v~g~~~~~P~g~~~~~~~~~DG~~~~v~~~~ 208 (386)
T 3sjl_D 163 GVVDLEGKAFKRMLDVPDCYHIFPTAPDTFFMHCRDGSLAKVAFGT 208 (386)
T ss_dssp EEEETTTTEEEEEEECCSEEEEEEEETTEEEEEETTSCEEEEECCS
T ss_pred EEEECCCCcEEEEEECCCcceeecCCCceeEEECCCCCEEEEECCC
Confidence 9999999988887765543333333445666777788887777754
No 185
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.16 E-value=5.5e-09 Score=61.60 Aligned_cols=109 Identities=7% Similarity=-0.131 Sum_probs=77.1
Q ss_pred eEEEcCCCCEEEEEcCCCcEEEEEcCCCCCcEEEeeccCCeeEEE--EccCCCEEEEe----------------------
Q 045566 3 CSTWKDDGTTVFSGGCDKQVKMWPLLSGGQPVTVAMHDAPIKEVA--WIPEMNLLATG---------------------- 58 (112)
Q Consensus 3 ~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~--~~~~~~~~~~~---------------------- 58 (112)
..+|+|+++.|+.++.++.+.+||+.+++.......+...+.... +++++..++..
T Consensus 85 ~~~~spdg~~l~~~~~~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (388)
T 3pe7_A 85 GGFLSPDDDALFYVKDGRNLMRVDLATLEENVVYQVPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFT 164 (388)
T ss_dssp SCEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGG
T ss_pred ceEEcCCCCEEEEEeCCCeEEEEECCCCcceeeeechhhcccccceeECCCCCeeccccccCcccccccccchhhhhhcc
Confidence 468999999999999989999999988876555544444443333 47888887642
Q ss_pred eCCCcEEEeeCCCCCceEEe--cCCCeEEEEee-CCCEEEEEeCC------CcEEEEECcCC
Q 045566 59 SWDKTLKYWDTRQPNPVHTQ--QLPDRCYALTV-RYPLMVVGTAD------RNLVVFNLQNP 111 (112)
Q Consensus 59 ~~~~~i~~w~~~~~~~~~~~--~~~~~~~~~~~-~~~~~~~~~~d------~~v~~~d~~~~ 111 (112)
..+..|.+||+.+++..... ........|+| ++..++....+ ..|.++|+..+
T Consensus 165 ~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~ 226 (388)
T 3pe7_A 165 KPCCRLMRVDLKTGESTVILQENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGT 226 (388)
T ss_dssp CCCEEEEEEETTTCCEEEEEEESSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSC
T ss_pred CCcceEEEEECCCCceEEeecCCccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCC
Confidence 23467999999887654332 23356788999 99888776653 36778876543
No 186
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.15 E-value=7.9e-10 Score=70.50 Aligned_cols=108 Identities=14% Similarity=0.167 Sum_probs=74.7
Q ss_pred eeEEEcCCCCEEEEEcCC-----CcEEEEEcCCCCCcEEEeeccCCeeEEEEccCCCEEEEeeCCCc-------------
Q 045566 2 LCSTWKDDGTTVFSGGCD-----KQVKMWPLLSGGQPVTVAMHDAPIKEVAWIPEMNLLATGSWDKT------------- 63 (112)
Q Consensus 2 ~~~~~~~~~~~l~~~~~~-----~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~------------- 63 (112)
..++|||||++|+.+..+ ..|++||+.+++.... ..+...+..++|+|+ +.++.+..+..
T Consensus 166 ~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~tg~~~~~-~~~~~~~~~~~wspD-~~l~~~~~~~~~~~~~~~~~~~~~ 243 (741)
T 1yr2_A 166 DAWAASDDGRLLAYSVQDGGSDWRTVKFVGVADGKPLAD-ELKWVKFSGLAWLGN-DALLYSRFAEPKEGQAFQALNYNQ 243 (741)
T ss_dssp EEEEECTTSSEEEEEEEETTCSEEEEEEEETTTCCEEEE-EEEEEESCCCEESTT-SEEEEEECCCC--------CCCCC
T ss_pred EeEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCCc-cCCCceeccEEEECC-CEEEEEEecCcccccccccCCCCC
Confidence 467899999998876543 4699999988876432 112222357889999 88877765543
Q ss_pred -EEEeeCCCCCc--eEEecCC-----CeEEEEeeCCCEEEEEeCCC-----cEEEEECcCC
Q 045566 64 -LKYWDTRQPNP--VHTQQLP-----DRCYALTVRYPLMVVGTADR-----NLVVFNLQNP 111 (112)
Q Consensus 64 -i~~w~~~~~~~--~~~~~~~-----~~~~~~~~~~~~~~~~~~d~-----~v~~~d~~~~ 111 (112)
|++|++.+.+. ...+... .....++|+|++++..+.++ .|++||+.++
T Consensus 244 ~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~ 304 (741)
T 1yr2_A 244 TVWLHRLGTPQSADQPVFATPELPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNG 304 (741)
T ss_dssp EEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETT
T ss_pred EEEEEECCCCchhCEEEeccCCCCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCC
Confidence 88999876652 2222221 34678899999888776543 7999998764
No 187
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.15 E-value=1.3e-08 Score=60.42 Aligned_cols=106 Identities=8% Similarity=-0.049 Sum_probs=76.4
Q ss_pred eEEEcCCCCEEEEEc----------CCCcEEEEEcCCCCCcEEEeec-------cCCeeEEEEccCCCEEEEeeC--CCc
Q 045566 3 CSTWKDDGTTVFSGG----------CDKQVKMWPLLSGGQPVTVAMH-------DAPIKEVAWIPEMNLLATGSW--DKT 63 (112)
Q Consensus 3 ~~~~~~~~~~l~~~~----------~~~~v~~~~~~~~~~~~~~~~~-------~~~v~~~~~~~~~~~~~~~~~--~~~ 63 (112)
.++++|++++++++. .++.|.++|..+.+....+... ...-..+.++|+|++++.+.. ++.
T Consensus 70 ~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~~~~~ 149 (373)
T 2mad_H 70 NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPA 149 (373)
T ss_pred CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCCcEEEEEECCCccccccCCCccceEECCCCCEEEEEecCCCCe
Confidence 478999999998886 3678999999877776655422 122357899999999988764 578
Q ss_pred EEEeeCCCCCceEE-ecCCCeEEEEeeCC-CEEEEEeCCCcEEEEECcCC
Q 045566 64 LKYWDTRQPNPVHT-QQLPDRCYALTVRY-PLMVVGTADRNLVVFNLQNP 111 (112)
Q Consensus 64 i~~w~~~~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~d~~v~~~d~~~~ 111 (112)
|.++| .+.+.+.. ...+.. ..+.+.+ ..+++.+.|+.+.++|. ++
T Consensus 150 v~viD-~t~~~~~~~i~~~~~-~~~~~~~~~~~~~~~~dg~~~~vd~-~g 196 (373)
T 2mad_H 150 VGLVV-QGGSSDDQLLSSPTC-YHIHPGAPSTFYLLCAQGGLAKTDH-AG 196 (373)
T ss_pred EEEEE-CCCCEEeEEcCCCce-EEEEeCCCceEEEEcCCCCEEEEEC-CC
Confidence 99999 88887776 654433 3444544 45566677888888887 44
No 188
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.15 E-value=4.9e-09 Score=66.62 Aligned_cols=110 Identities=14% Similarity=0.132 Sum_probs=75.4
Q ss_pred eeEEEcCCCCEEEEEcCCCc----------------EEEEEcCCCCCc--EEEee--ccCCeeEEEEccCCCEEEEeeC-
Q 045566 2 LCSTWKDDGTTVFSGGCDKQ----------------VKMWPLLSGGQP--VTVAM--HDAPIKEVAWIPEMNLLATGSW- 60 (112)
Q Consensus 2 ~~~~~~~~~~~l~~~~~~~~----------------v~~~~~~~~~~~--~~~~~--~~~~v~~~~~~~~~~~~~~~~~- 60 (112)
..++|+|||+.|+.++.++. |.+|++.+++.. ..+.. +...+..+.|+|++++++....
T Consensus 174 ~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~ 253 (710)
T 2xdw_A 174 SCMAWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIRE 253 (710)
T ss_dssp CCEEECTTSSEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEEC
T ss_pred ceEEEEeCCCEEEEEEECCccccccccccccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEEc
Confidence 46899999999988877655 999998776533 22222 3445778999999998877654
Q ss_pred ----CCcEEEeeCCC------CC-ceEEecC--CCeEEEEeeCCCEEEEEeCC----CcEEEEECcCC
Q 045566 61 ----DKTLKYWDTRQ------PN-PVHTQQL--PDRCYALTVRYPLMVVGTAD----RNLVVFNLQNP 111 (112)
Q Consensus 61 ----~~~i~~w~~~~------~~-~~~~~~~--~~~~~~~~~~~~~~~~~~~d----~~v~~~d~~~~ 111 (112)
+..+.+||+.+ +. ....+.. ......+++++..++..+.. ..|.+||+.++
T Consensus 254 ~~~~~~~l~~~d~~~~~~~~~~~~~~~~l~~~~~~~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~ 321 (710)
T 2xdw_A 254 GCDPVNRLWYCDLQQESNGITGILKWVKLIDNFEGEYDYVTNEGTVFTFKTNRHSPNYRLINIDFTDP 321 (710)
T ss_dssp SSSSCCEEEEEEGGGSSSSSCSSCCCEEEECSSSSCEEEEEEETTEEEEEECTTCTTCEEEEEETTSC
T ss_pred cCCCccEEEEEECcccccccCCccceEEeeCCCCcEEEEEeccCCEEEEEECCCCCCCEEEEEeCCCC
Confidence 56799999875 32 2333322 22334578888877766553 35999998765
No 189
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.14 E-value=2.7e-09 Score=60.96 Aligned_cols=97 Identities=10% Similarity=0.022 Sum_probs=77.0
Q ss_pred CCCEEEEEcCCCcEEEEEcCCCCCcEEEeecc-CCeeEEEEccCCCEEEEeeCCCcEEEeeCCCCCceEEecCC----Ce
Q 045566 9 DGTTVFSGGCDKQVKMWPLLSGGQPVTVAMHD-APIKEVAWIPEMNLLATGSWDKTLKYWDTRQPNPVHTQQLP----DR 83 (112)
Q Consensus 9 ~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~----~~ 83 (112)
.++.+++++.++.|.+||..+++.+.++..+. ..+.++.+.|+|+.++ +.++.+..||. +++.+..+..+ ..
T Consensus 4 ~~~~lv~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~~~~~~pdG~ilv--s~~~~V~~~d~-~G~~~W~~~~~~~~~~~ 80 (276)
T 3no2_A 4 PQHLLVGGSGWNKIAIINKDTKEIVWEYPLEKGWECNSVAATKAGEILF--SYSKGAKMITR-DGRELWNIAAPAGCEMQ 80 (276)
T ss_dssp CCEEEEECTTCSEEEEEETTTTEEEEEEECCTTCCCCEEEECTTSCEEE--ECBSEEEEECT-TSCEEEEEECCTTCEEE
T ss_pred CCcEEEeeCCCCEEEEEECCCCeEEEEeCCCccCCCcCeEECCCCCEEE--eCCCCEEEECC-CCCEEEEEcCCCCcccc
Confidence 46789999999999999988999888887655 4688999999999888 34677999998 78877777653 23
Q ss_pred EEEEeeCCCEEEEEeC-CCcEEEEEC
Q 045566 84 CYALTVRYPLMVVGTA-DRNLVVFNL 108 (112)
Q Consensus 84 ~~~~~~~~~~~~~~~~-d~~v~~~d~ 108 (112)
...+.++++.+++.+. ++.+..+|.
T Consensus 81 ~~~~~~dG~~lv~~~~~~~~v~~vd~ 106 (276)
T 3no2_A 81 TARILPDGNALVAWCGHPSTILEVNM 106 (276)
T ss_dssp EEEECTTSCEEEEEESTTEEEEEECT
T ss_pred ccEECCCCCEEEEecCCCCEEEEEeC
Confidence 4567788999888877 666766654
No 190
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.11 E-value=8.6e-09 Score=58.98 Aligned_cols=93 Identities=9% Similarity=-0.069 Sum_probs=71.9
Q ss_pred eeEEEcCCCC-EEEEEcCCCcEEEEEcCCCCCcEEEeeccCCeeEEEEccCCCEEEEeeCCCcEEEeeCCCCCceEEec-
Q 045566 2 LCSTWKDDGT-TVFSGGCDKQVKMWPLLSGGQPVTVAMHDAPIKEVAWIPEMNLLATGSWDKTLKYWDTRQPNPVHTQQ- 79 (112)
Q Consensus 2 ~~~~~~~~~~-~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~- 79 (112)
.+++|+|+++ .++++..++.|..|+..++ ...+..+...+.++++++++.++++...++.|.+||..+++......
T Consensus 31 eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~--~~~~~~~~~~~~~l~~~~dg~l~v~~~~~~~i~~~d~~~g~~~~~~~~ 108 (296)
T 3e5z_A 31 EGPVYVPARSAVIFSDVRQNRTWAWSDDGQ--LSPEMHPSHHQNGHCLNKQGHLIACSHGLRRLERQREPGGEWESIADS 108 (296)
T ss_dssp EEEEEEGGGTEEEEEEGGGTEEEEEETTSC--EEEEESSCSSEEEEEECTTCCEEEEETTTTEEEEECSTTCCEEEEECE
T ss_pred cCCeEeCCCCEEEEEeCCCCEEEEEECCCC--eEEEECCCCCcceeeECCCCcEEEEecCCCeEEEEcCCCCcEEEEeec
Confidence 4688999998 7788888999999998765 55566566778999999999988877777899999997766432221
Q ss_pred ------CCCeEEEEeeCCCEEEE
Q 045566 80 ------LPDRCYALTVRYPLMVV 96 (112)
Q Consensus 80 ------~~~~~~~~~~~~~~~~~ 96 (112)
.....++++++|+++++
T Consensus 109 ~~~~~~~~~~~i~~d~~G~l~vt 131 (296)
T 3e5z_A 109 FEGKKLNSPNDVCLAPDGSLWFS 131 (296)
T ss_dssp ETTEECCCCCCEEECTTSCEEEE
T ss_pred cCCCCCCCCCCEEECCCCCEEEE
Confidence 12346888999987776
No 191
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.11 E-value=5.1e-09 Score=59.83 Aligned_cols=109 Identities=11% Similarity=0.041 Sum_probs=81.7
Q ss_pred eeEEEcCCCCEEEEEcC-CCcEEEEEcCCCCCcEEEee------ccCCeeEEEEccCCCEEEEeeCCCcEEEeeCCCCCc
Q 045566 2 LCSTWKDDGTTVFSGGC-DKQVKMWPLLSGGQPVTVAM------HDAPIKEVAWIPEMNLLATGSWDKTLKYWDTRQPNP 74 (112)
Q Consensus 2 ~~~~~~~~~~~l~~~~~-~~~v~~~~~~~~~~~~~~~~------~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~ 74 (112)
.++.+.++|+.+++.+. ++.+..++. +++.+..+.. +......+.+.+++.++++...++.|..||.. ++.
T Consensus 80 ~~~~~~~dG~~lv~~~~~~~~v~~vd~-~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~~~~~v~~~d~~-G~~ 157 (276)
T 3no2_A 80 QTARILPDGNALVAWCGHPSTILEVNM-KGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFATSEVREIAPN-GQL 157 (276)
T ss_dssp EEEEECTTSCEEEEEESTTEEEEEECT-TSCEEEEEEECCSCSSGGGSCSCCEECTTSCEEEEETTTTEEEEECTT-SCE
T ss_pred cccEECCCCCEEEEecCCCCEEEEEeC-CCCEEEEEeccCCCCcccccccCceECCCCCEEEEecCCCEEEEECCC-CCE
Confidence 35678889999988776 777777774 5666555532 11234556788899999999999999999998 888
Q ss_pred eEEecCC--CeEEEEeeCCCEEEEEeCCCcEEEEECcCCC
Q 045566 75 VHTQQLP--DRCYALTVRYPLMVVGTADRNLVVFNLQNPQ 112 (112)
Q Consensus 75 ~~~~~~~--~~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~ 112 (112)
+..+... .......++++.++++..++.|..+|..+++
T Consensus 158 ~w~~~~~~~~~~~~~~~~g~~~v~~~~~~~v~~~d~~tG~ 197 (276)
T 3no2_A 158 LNSVKLSGTPFSSAFLDNGDCLVACGDAHCFVQLNLESNR 197 (276)
T ss_dssp EEEEECSSCCCEEEECTTSCEEEECBTTSEEEEECTTTCC
T ss_pred EEEEECCCCccceeEcCCCCEEEEeCCCCeEEEEeCcCCc
Confidence 8777543 3455667788888888888889999988764
No 192
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.11 E-value=3.8e-10 Score=66.56 Aligned_cols=110 Identities=6% Similarity=-0.013 Sum_probs=70.0
Q ss_pred eeEEEcCCCCEEEEEcC---CCcEEEEEcCCCCCcEEEeeccCC-eeEEEEccCCCEEEEeeCCCcEEEeeCCCCCceEE
Q 045566 2 LCSTWKDDGTTVFSGGC---DKQVKMWPLLSGGQPVTVAMHDAP-IKEVAWIPEMNLLATGSWDKTLKYWDTRQPNPVHT 77 (112)
Q Consensus 2 ~~~~~~~~~~~l~~~~~---~~~v~~~~~~~~~~~~~~~~~~~~-v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~ 77 (112)
..++|+|+|++++.... +..+.+|++.+++.. .+...... .....|+|+++.++....++.+.+||+.+++....
T Consensus 39 ~~~~~SpdG~~l~~~~~~~g~~~l~~~d~~~~~~~-~l~~~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~~~~~~~ 117 (396)
T 3c5m_A 39 YQKCFTQDGKKLLFAGDFDGNRNYYLLNLETQQAV-QLTEGKGDNTFGGFISTDERAFFYVKNELNLMKVDLETLEEQVI 117 (396)
T ss_dssp TSCCBCTTSCEEEEEECTTSSCEEEEEETTTTEEE-ECCCSSCBCTTTCEECTTSSEEEEEETTTEEEEEETTTCCEEEE
T ss_pred ecCcCCCCCCEEEEEEecCCCceEEEEECCCCcEE-EeecCCCCccccceECCCCCEEEEEEcCCcEEEEECCCCCcEEE
Confidence 35689999998876643 246888887765542 33322222 23377999999999988888999999988765444
Q ss_pred ecCCCe------E----------------EEEeeCCCEEEEE-----eCCCcEEEEECcCCC
Q 045566 78 QQLPDR------C----------------YALTVRYPLMVVG-----TADRNLVVFNLQNPQ 112 (112)
Q Consensus 78 ~~~~~~------~----------------~~~~~~~~~~~~~-----~~d~~v~~~d~~~~~ 112 (112)
...+.. . ..++|+++.++.. ..+..|.+||+.+++
T Consensus 118 ~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~~~l~~~d~~~g~ 179 (396)
T 3c5m_A 118 YTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTNPTCRLIKVDIETGE 179 (396)
T ss_dssp EECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHTCCCEEEEEEETTTCC
T ss_pred EecccccCCCCCEEEeccCCccccccccccccCCCCcceeeeeeccCCCcceEEEEECCCCc
Confidence 332211 0 1234455444332 345678889987653
No 193
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.10 E-value=3.9e-09 Score=62.97 Aligned_cols=103 Identities=10% Similarity=-0.007 Sum_probs=73.4
Q ss_pred CeeEEEcCCCCEEEEEcCCCcEEEEEcCCCC-----------CcEEEeeccCCeeEEEEccCCCEEEEeeCCCcEEEeeC
Q 045566 1 VLCSTWKDDGTTVFSGGCDKQVKMWPLLSGG-----------QPVTVAMHDAPIKEVAWIPEMNLLATGSWDKTLKYWDT 69 (112)
Q Consensus 1 v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~-----------~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~ 69 (112)
++.+++++....+++|+.++ +.+|++.... +.... .... |+.++| ++.+++.+ .++.|++||+
T Consensus 40 ~nlLais~~~gll~a~~~~~-l~v~~~~~l~~~~~~~~~~~~~~~~~-~lp~-V~~l~f--d~~~L~v~-~~~~l~v~dv 113 (388)
T 1xip_A 40 LQNLDISNSKSLFVAASGSK-AVVGELQLLRDHITSDSTPLTFKWEK-EIPD-VIFVCF--HGDQVLVS-TRNALYSLDL 113 (388)
T ss_dssp CBCEEEETTTTEEEEEETTE-EEEEEHHHHHHHHHSSSCCCCCSEEE-ECTT-EEEEEE--ETTEEEEE-ESSEEEEEES
T ss_pred ccEEEEcCCCCEEEEeCCCE-EEEEEhhHhhhhhccccccccceEEe-eCCC-eeEEEE--CCCEEEEE-cCCcEEEEEc
Confidence 46789999999999999874 5569864222 22223 3555 999999 88899888 8899999998
Q ss_pred CCCCceE---EecCCCeEEEEeeCCCEEEEEeCCCcEEEEECcCC
Q 045566 70 RQPNPVH---TQQLPDRCYALTVRYPLMVVGTADRNLVVFNLQNP 111 (112)
Q Consensus 70 ~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~d~~v~~~d~~~~ 111 (112)
++..... .+..... .+.+..+.++++..||.+.+||+.++
T Consensus 114 ~sl~~~~~~~~~~~~v~--~i~~~~p~~av~~~dG~L~v~dl~~~ 156 (388)
T 1xip_A 114 EELSEFRTVTSFEKPVF--QLKNVNNTLVILNSVNDLSALDLRTK 156 (388)
T ss_dssp SSTTCEEEEEECSSCEE--EEEECSSEEEEEETTSEEEEEETTTC
T ss_pred hhhhccCccceeeccee--eEEecCCCEEEEECCCCEEEEEccCC
Confidence 7655332 3333333 33344445888999999999999865
No 194
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.10 E-value=1.5e-08 Score=60.18 Aligned_cols=103 Identities=16% Similarity=0.006 Sum_probs=77.5
Q ss_pred cCCCCEEEEEcC--CC---cEEEEEcCCCCCcEEEeeccCCeeEEEEccCCCEEEEee----------CCCcEEEeeCCC
Q 045566 7 KDDGTTVFSGGC--DK---QVKMWPLLSGGQPVTVAMHDAPIKEVAWIPEMNLLATGS----------WDKTLKYWDTRQ 71 (112)
Q Consensus 7 ~~~~~~l~~~~~--~~---~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~----------~~~~i~~w~~~~ 71 (112)
.|+++++++... .. .|.++|..+++.+.+++....+ .+.++|++++++.+. .++.|.++|..+
T Consensus 29 ~~~~~~~yv~~~~~~~~~~~v~v~D~~t~~~~~~i~~g~~p--~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t 106 (373)
T 2mad_H 29 GADGRRSYINLPAHHSAIIQQWVLDAGSGSILGHVNGGFLP--NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVT 106 (373)
T ss_pred CCCCCEEEEeCCcccCCccEEEEEECCCCeEEEEecCCCCC--CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCC
Confidence 467787777764 32 7899999888877676644333 899999999888775 367799999988
Q ss_pred CCceEEecCC----------CeEEEEeeCCCEEEEEeC--CCcEEEEECcCCC
Q 045566 72 PNPVHTQQLP----------DRCYALTVRYPLMVVGTA--DRNLVVFNLQNPQ 112 (112)
Q Consensus 72 ~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~--d~~v~~~d~~~~~ 112 (112)
.+.+...... ...+.++|+++++++++. +..|.++| .+++
T Consensus 107 ~~~~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~~~~~v~viD-~t~~ 158 (373)
T 2mad_H 107 FLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPAVGLVV-QGGS 158 (373)
T ss_pred CcEEEEEECCCccccccCCCccceEECCCCCEEEEEecCCCCeEEEEE-CCCC
Confidence 7776655332 246889999999999874 47799999 7764
No 195
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.06 E-value=5.5e-10 Score=64.77 Aligned_cols=108 Identities=4% Similarity=0.005 Sum_probs=79.5
Q ss_pred CeeEEEcCCCCEEEEEcCCCcEEEEEcCCCCCcEEEeeccCCeeEEEEccCCCEEEEeeCCCcEEEeeCCCCCceEEe--
Q 045566 1 VLCSTWKDDGTTVFSGGCDKQVKMWPLLSGGQPVTVAMHDAPIKEVAWIPEMNLLATGSWDKTLKYWDTRQPNPVHTQ-- 78 (112)
Q Consensus 1 v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~-- 78 (112)
|.+++|++++..++..+.++.++.|. .+....+..+...+.+++|++++.+++++..++.|.+||..+++.....
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~i~~~d~~~~~~~~~~~~ 84 (333)
T 2dg1_A 8 LPTLFYSGKSNSAVPIISESELQTIT---AEPWLEISKKGLQLEGLNFDRQGQLFLLDVFEGNIFKINPETKEIKRPFVS 84 (333)
T ss_dssp CCBCCSCGGGGCSSCCCCGGGSCEEE---CEEEEEEESSCCCEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEEC
T ss_pred cceeeecCCccceeEEeecccCcccc---cceeEEEeccCccccCcEECCCCCEEEEECCCCEEEEEeCCCCcEEEEeeC
Confidence 45678888877776667778888883 3344455556667789999999998888888999999999877654432
Q ss_pred -cCCCeEEEEeeCCCEEEEEeCC----CcEEEEECcCC
Q 045566 79 -QLPDRCYALTVRYPLMVVGTAD----RNLVVFNLQNP 111 (112)
Q Consensus 79 -~~~~~~~~~~~~~~~~~~~~~d----~~v~~~d~~~~ 111 (112)
......+++++++.++++...+ +.|.+||..++
T Consensus 85 ~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~ 122 (333)
T 2dg1_A 85 HKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGD 122 (333)
T ss_dssp SSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSC
T ss_pred CCCCcceEEECCCCcEEEEeCCCCCCCceEEEEeCCCC
Confidence 1234678888999877776665 68999987654
No 196
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.04 E-value=1.4e-08 Score=57.22 Aligned_cols=109 Identities=13% Similarity=-0.034 Sum_probs=76.8
Q ss_pred eeEEEcCCCCEEEEEcCCCcEEEEEcCCCCCcEEEeeccCCeeEEEEccCCCEEEEeeCCCcEEEeeCCCCCceEEec--
Q 045566 2 LCSTWKDDGTTVFSGGCDKQVKMWPLLSGGQPVTVAMHDAPIKEVAWIPEMNLLATGSWDKTLKYWDTRQPNPVHTQQ-- 79 (112)
Q Consensus 2 ~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~-- 79 (112)
..++++++++.+++...++.|.+|+..+................+++++++..+++...++.|..|+...........
T Consensus 111 ~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~ 190 (270)
T 1rwi_B 111 EGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTVLPFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAESNNQVVLPFTD 190 (270)
T ss_dssp EEEEECTTCCEEEEEGGGTEEEEECTTCCSCEECCCCSCCSCCCEEECTTCCEEEEEGGGTEEEEECTTTCCEEECCCSS
T ss_pred cceEECCCCCEEEEECCCCEEEEEECCCceeEeeccccCCCceeEEEeCCCCEEEEECCCCEEEEEecCCCceEeecccC
Confidence 468899999877777778889999754433322222223456889999999888877778899999987665433221
Q ss_pred -CCCeEEEEeeCCCEEEEEeCCCcEEEEECcC
Q 045566 80 -LPDRCYALTVRYPLMVVGTADRNLVVFNLQN 110 (112)
Q Consensus 80 -~~~~~~~~~~~~~~~~~~~~d~~v~~~d~~~ 110 (112)
.....+++++++..+++...++.|..||...
T Consensus 191 ~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~ 222 (270)
T 1rwi_B 191 ITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGS 222 (270)
T ss_dssp CCSEEEEEECTTCCEEEEETTTSCEEEECTTC
T ss_pred CCCceEEEECCCCCEEEEECCCCcEEEEcCCC
Confidence 2235678888887666666788999998754
No 197
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.02 E-value=1.1e-08 Score=59.59 Aligned_cols=102 Identities=8% Similarity=0.089 Sum_probs=64.9
Q ss_pred eeEEEcCCCCEEEEEcCC---------------------------CcEEEEEcCCCCCcEEEeeccCCeeEEEEccCCCE
Q 045566 2 LCSTWKDDGTTVFSGGCD---------------------------KQVKMWPLLSGGQPVTVAMHDAPIKEVAWIPEMNL 54 (112)
Q Consensus 2 ~~~~~~~~~~~l~~~~~~---------------------------~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 54 (112)
..++|+|+|+.|+.++.+ ..|.+|++.+++....+.. . .+..+.|+|++ .
T Consensus 107 ~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l~~-~-~~~~~~~spdg-~ 183 (347)
T 2gop_A 107 RSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEEVIEEFEK-P-RFSSGIWHRDK-I 183 (347)
T ss_dssp EEEEECTTSSEEEEEEECCCC---------CCCC---------CEEEEEEEETTTTEEEEEEEE-E-TTCEEEEETTE-E
T ss_pred cceeECCCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCCeEEeeecC-C-CcccccCCCCe-E
Confidence 578999999988877632 5688899877665344444 3 78899999999 7
Q ss_pred EEEeeCCC-------cEEEeeCCCCCceEEecCCCeEEEEeeCCCEEEEEeCC--------CcEEEEE
Q 045566 55 LATGSWDK-------TLKYWDTRQPNPVHTQQLPDRCYALTVRYPLMVVGTAD--------RNLVVFN 107 (112)
Q Consensus 55 ~~~~~~~~-------~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d--------~~v~~~d 107 (112)
++++..+. ...+|.+.+++. ..+........++|+++.++..+.+ ..|.+||
T Consensus 184 ~~~~~~~~~~~~~~~~~~l~~~d~~~~-~~l~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d 250 (347)
T 2gop_A 184 VVNVPHREIIPQYFKFWDIYIWEDGKE-EKMFEKVSFYAVDSDGERILLYGKPEKKYMSEHNKLYIYD 250 (347)
T ss_dssp EEEEECCCSSCCSSCCEEEEEEETTEE-EEEEEEESEEEEEECSSCEEEEECCSSSCCCSSCEEEEEC
T ss_pred EEEEecccccccccccccEEEeCCCce-EEeccCcceeeECCCCCEEEEEEccccCCccccceEEEEC
Confidence 77765432 334444333332 2221112233448999988777654 3577776
No 198
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.01 E-value=8.6e-08 Score=54.85 Aligned_cols=106 Identities=7% Similarity=-0.003 Sum_probs=73.8
Q ss_pred eeEEEcCCCCEEEEEcCCCcEEEEEcC-CCCC---cEEEeeccCCeeEEEEccCCCEEEEeeCCCcEEEeeCCCCCceEE
Q 045566 2 LCSTWKDDGTTVFSGGCDKQVKMWPLL-SGGQ---PVTVAMHDAPIKEVAWIPEMNLLATGSWDKTLKYWDTRQPNPVHT 77 (112)
Q Consensus 2 ~~~~~~~~~~~l~~~~~~~~v~~~~~~-~~~~---~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~ 77 (112)
..++|+|+++.+++.+.++.|.+|++. .++. ...+..+...+..++++++|.++++. ++.|.+|+.. ++.+..
T Consensus 175 ~gi~~s~dg~~lv~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~--~~~v~~~~~~-g~~~~~ 251 (296)
T 3e5z_A 175 NGLAFLPSGNLLVSDTGDNATHRYCLNARGETEYQGVHFTVEPGKTDGLRVDAGGLIWASA--GDGVHVLTPD-GDELGR 251 (296)
T ss_dssp EEEEECTTSCEEEEETTTTEEEEEEECSSSCEEEEEEEECCSSSCCCSEEEBTTSCEEEEE--TTEEEEECTT-SCEEEE
T ss_pred ccEEECCCCCEEEEeCCCCeEEEEEECCCCcCcCCCeEeeCCCCCCCeEEECCCCCEEEEc--CCeEEEECCC-CCEEEE
Confidence 468999999988777888999999986 3332 12222234456789999999877766 7889999986 555544
Q ss_pred ecC--CCeEEEE-eeCCCEEEEEeCCCcEEEEECcCC
Q 045566 78 QQL--PDRCYAL-TVRYPLMVVGTADRNLVVFNLQNP 111 (112)
Q Consensus 78 ~~~--~~~~~~~-~~~~~~~~~~~~d~~v~~~d~~~~ 111 (112)
+.. ....++| .+++..|++++.++ +.-++.++.
T Consensus 252 ~~~~~~~~~~~f~~~d~~~L~v~t~~~-l~~~~~~~~ 287 (296)
T 3e5z_A 252 VLTPQTTSNLCFGGPEGRTLYMTVSTE-FWSIETNVR 287 (296)
T ss_dssp EECSSCCCEEEEESTTSCEEEEEETTE-EEEEECSCC
T ss_pred EECCCCceeEEEECCCCCEEEEEcCCe-EEEEEcccc
Confidence 433 2567778 47888888888764 545555543
No 199
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.00 E-value=1.7e-08 Score=64.07 Aligned_cols=109 Identities=6% Similarity=-0.009 Sum_probs=71.1
Q ss_pred eeEEEcCCCCEEEEEcCCCc-------------EEEEEcCCCCCc--EEEe--eccCCeeEEEEccCCCEEEEeeCCC--
Q 045566 2 LCSTWKDDGTTVFSGGCDKQ-------------VKMWPLLSGGQP--VTVA--MHDAPIKEVAWIPEMNLLATGSWDK-- 62 (112)
Q Consensus 2 ~~~~~~~~~~~l~~~~~~~~-------------v~~~~~~~~~~~--~~~~--~~~~~v~~~~~~~~~~~~~~~~~~~-- 62 (112)
..++|+|+|+.|+.++.+.. |++|++.++... ..+. .+...+..+.|+|+|++++....++
T Consensus 171 ~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~ 250 (695)
T 2bkl_A 171 ATPKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYILRGWS 250 (695)
T ss_dssp CCCEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEEEETTT
T ss_pred cceEEecCCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEEECCCCCEEEEEEeCCCC
Confidence 46899999999998887665 999998876632 2222 2345788999999999887776555
Q ss_pred --cEEEeeCCCCCceEEe--cCCCeEEEEeeCCCEEEEEe---CCCcEEEEECcCC
Q 045566 63 --TLKYWDTRQPNPVHTQ--QLPDRCYALTVRYPLMVVGT---ADRNLVVFNLQNP 111 (112)
Q Consensus 63 --~i~~w~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~---~d~~v~~~d~~~~ 111 (112)
.+.+++..+++..... ........+ +++.+++... .++.|.+||+.++
T Consensus 251 ~~~l~~~~~~~~~~~~l~~~~~~~~~~~~-~~g~l~~~s~~~~~~~~l~~~d~~~~ 305 (695)
T 2bkl_A 251 ENDVYWKRPGEKDFRLLVKGVGAKYEVHA-WKDRFYVLTDEGAPRQRVFEVDPAKP 305 (695)
T ss_dssp EEEEEEECTTCSSCEEEEECSSCCEEEEE-ETTEEEEEECTTCTTCEEEEEBTTBC
T ss_pred ceEEEEEcCCCCceEEeecCCCceEEEEe-cCCcEEEEECCCCCCCEEEEEeCCCC
Confidence 5777766544332222 222333334 5666444443 2578999998764
No 200
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=98.99 E-value=3.6e-08 Score=57.48 Aligned_cols=104 Identities=5% Similarity=-0.105 Sum_probs=76.3
Q ss_pred eEEEcCCCCEEEEEc--CCCcEEEEEcCCCCCcEEEeeccCCeeEEEEccCCCEEEEeeCC----------CcEEEeeCC
Q 045566 3 CSTWKDDGTTVFSGG--CDKQVKMWPLLSGGQPVTVAMHDAPIKEVAWIPEMNLLATGSWD----------KTLKYWDTR 70 (112)
Q Consensus 3 ~~~~~~~~~~l~~~~--~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~----------~~i~~w~~~ 70 (112)
.+++ ++..++++. .++.|.++|..+++....+... .....+.++|+++++++...+ +.|.++|..
T Consensus 135 ~i~~--~~~~lyv~~~~~~~~v~viD~~t~~~~~~i~~g-~~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~ 211 (328)
T 3dsm_A 135 QMVQ--YGKYVYVNCWSYQNRILKIDTETDKVVDELTIG-IQPTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAE 211 (328)
T ss_dssp CEEE--ETTEEEEEECTTCCEEEEEETTTTEEEEEEECS-SCBCCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETT
T ss_pred eEEE--ECCEEEEEcCCCCCEEEEEECCCCeEEEEEEcC-CCccceEEcCCCCEEEEECCCccCCccccCCceEEEEECC
Confidence 3455 344444444 4789999999888776666532 344678899999988777654 789999998
Q ss_pred CCCceEEecC----CCeEEEEeeCCCEEEEEeCCCcEEEEECcCC
Q 045566 71 QPNPVHTQQL----PDRCYALTVRYPLMVVGTADRNLVVFNLQNP 111 (112)
Q Consensus 71 ~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~d~~v~~~d~~~~ 111 (112)
+.+....+.. ....++++|++..++++.. .|.+||..++
T Consensus 212 t~~v~~~~~~~~g~~p~~la~~~d~~~lyv~~~--~v~~~d~~t~ 254 (328)
T 3dsm_A 212 TFTVEKQFKFKLGDWPSEVQLNGTRDTLYWINN--DIWRMPVEAD 254 (328)
T ss_dssp TTEEEEEEECCTTCCCEEEEECTTSCEEEEESS--SEEEEETTCS
T ss_pred CCeEEEEEecCCCCCceeEEEecCCCEEEEEcc--EEEEEECCCC
Confidence 8876655543 3578899999998888765 8999998765
No 201
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.98 E-value=1.5e-07 Score=53.61 Aligned_cols=110 Identities=12% Similarity=0.065 Sum_probs=78.2
Q ss_pred eeEEEcCCCCEEEEEcC--CCcEEEEEcCCCCCcEEEeeccC-CeeEEEEccCCCEEEEeeCCCcEEEeeCCCCCceEEe
Q 045566 2 LCSTWKDDGTTVFSGGC--DKQVKMWPLLSGGQPVTVAMHDA-PIKEVAWIPEMNLLATGSWDKTLKYWDTRQPNPVHTQ 78 (112)
Q Consensus 2 ~~~~~~~~~~~l~~~~~--~~~v~~~~~~~~~~~~~~~~~~~-~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~ 78 (112)
..+.|++++...++.+. ++.|++.|+.+++....+..... ....+.+. .+..+++.-.++.+.++|..+.+.+..+
T Consensus 24 ~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~-g~~lyv~t~~~~~v~viD~~t~~v~~~i 102 (266)
T 2iwa_A 24 QGLVYAENDTLFESTGLYGRSSVRQVALQTGKVENIHKMDDSYFGEGLTLL-NEKLYQVVWLKNIGFIYDRRTLSNIKNF 102 (266)
T ss_dssp EEEEECSTTEEEEEECSTTTCEEEEEETTTCCEEEEEECCTTCCEEEEEEE-TTEEEEEETTCSEEEEEETTTTEEEEEE
T ss_pred ccEEEeCCCeEEEECCCCCCCEEEEEECCCCCEEEEEecCCCcceEEEEEe-CCEEEEEEecCCEEEEEECCCCcEEEEE
Confidence 35789988755554443 57999999999998777653222 22344444 2344455556889999999998888877
Q ss_pred cCC-CeEEEEeeCCCEEEEEeCCCcEEEEECcCCC
Q 045566 79 QLP-DRCYALTVRYPLMVVGTADRNLVVFNLQNPQ 112 (112)
Q Consensus 79 ~~~-~~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~ 112 (112)
... .....+.+++..++++..++.+.++|..+.+
T Consensus 103 ~~g~~~g~glt~Dg~~l~vs~gs~~l~viD~~t~~ 137 (266)
T 2iwa_A 103 THQMKDGWGLATDGKILYGSDGTSILYEIDPHTFK 137 (266)
T ss_dssp ECCSSSCCEEEECSSSEEEECSSSEEEEECTTTCC
T ss_pred ECCCCCeEEEEECCCEEEEECCCCeEEEEECCCCc
Confidence 655 4556678888888888888899999988753
No 202
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=98.97 E-value=1.6e-08 Score=64.22 Aligned_cols=108 Identities=13% Similarity=0.127 Sum_probs=72.2
Q ss_pred eeEEEcCCCCEEEEE-----cCCCcEEEEEcCCCCCcEEEeeccCCeeEEEEccCCCEEEEeeCCC-------------c
Q 045566 2 LCSTWKDDGTTVFSG-----GCDKQVKMWPLLSGGQPVTVAMHDAPIKEVAWIPEMNLLATGSWDK-------------T 63 (112)
Q Consensus 2 ~~~~~~~~~~~l~~~-----~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~-------------~ 63 (112)
..++|||+|++++.+ +....|+++|+.+++..... ........++|+ |++.++.+..+. .
T Consensus 132 ~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~~-~~~~k~~~~~Ws-Dg~~l~y~~~~~~~~~~~~~~~~~~~ 209 (693)
T 3iuj_A 132 DQLSFSRDGRILAYSLSLAGSDWREIHLMDVESKQPLETP-LKDVKFSGISWL-GNEGFFYSSYDKPDGSELSARTDQHK 209 (693)
T ss_dssp EEEEECTTSSEEEEEEECSSCCEEEEEEEETTTCSEEEEE-EEEEESCCCEEE-TTTEEEEEESSCCC-------CCCCE
T ss_pred EEEEECCCCCEEEEEEecCCCceEEEEEEECCCCCCCccc-cCCceeccEEEe-CCCEEEEEEecCcccccccccCCCcE
Confidence 467899999988853 33467999999988754321 111113567899 999888777663 3
Q ss_pred EEEeeCCCCCc--eEEecCC------CeEEEEeeCCCEEEEEeC----CCcEEEEECcCC
Q 045566 64 LKYWDTRQPNP--VHTQQLP------DRCYALTVRYPLMVVGTA----DRNLVVFNLQNP 111 (112)
Q Consensus 64 i~~w~~~~~~~--~~~~~~~------~~~~~~~~~~~~~~~~~~----d~~v~~~d~~~~ 111 (112)
|++|++.+.+. ...+... .....+++++++++.... +..++++|+.++
T Consensus 210 v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~ 269 (693)
T 3iuj_A 210 VYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQE 269 (693)
T ss_dssp EEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTST
T ss_pred EEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCC
Confidence 89999877643 2222222 245678999998755433 247899998665
No 203
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=98.96 E-value=8e-08 Score=56.01 Aligned_cols=104 Identities=7% Similarity=0.036 Sum_probs=74.0
Q ss_pred EEEcCCCCEEEEEcCCCcEEEEEcCCCCCcEEEeeccCCeeEEEEccCCCEEEEeeCCCcEEEeeCCCCCceEEecCC--
Q 045566 4 STWKDDGTTVFSGGCDKQVKMWPLLSGGQPVTVAMHDAPIKEVAWIPEMNLLATGSWDKTLKYWDTRQPNPVHTQQLP-- 81 (112)
Q Consensus 4 ~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~-- 81 (112)
+++. +++..++...++.|.++|..+++.+.++. .......+++++++..+++...++.|.++|..+.+....+...
T Consensus 49 i~~~-~~~lyv~~~~~~~v~viD~~t~~~~~~i~-~~~~p~~i~~~~~g~lyv~~~~~~~v~~iD~~t~~~~~~i~~g~~ 126 (328)
T 3dsm_A 49 MVIR-DGIGWIVVNNSHVIFAIDINTFKEVGRIT-GFTSPRYIHFLSDEKAYVTQIWDYRIFIINPKTYEITGYIECPDM 126 (328)
T ss_dssp EEEE-TTEEEEEEGGGTEEEEEETTTCCEEEEEE-CCSSEEEEEEEETTEEEEEEBSCSEEEEEETTTTEEEEEEECTTC
T ss_pred EEEE-CCEEEEEEcCCCEEEEEECcccEEEEEcC-CCCCCcEEEEeCCCeEEEEECCCCeEEEEECCCCeEEEEEEcCCc
Confidence 4443 34555666667899999999988877775 3456788999888866555557899999999988766554422
Q ss_pred ------CeEEEEeeCCCEEEEEe--CCCcEEEEECcCC
Q 045566 82 ------DRCYALTVRYPLMVVGT--ADRNLVVFNLQNP 111 (112)
Q Consensus 82 ------~~~~~~~~~~~~~~~~~--~d~~v~~~d~~~~ 111 (112)
...+++ ++..++++. .++.|.++|++++
T Consensus 127 ~~~~~~p~~i~~--~~~~lyv~~~~~~~~v~viD~~t~ 162 (328)
T 3dsm_A 127 DMESGSTEQMVQ--YGKYVYVNCWSYQNRILKIDTETD 162 (328)
T ss_dssp CTTTCBCCCEEE--ETTEEEEEECTTCCEEEEEETTTT
T ss_pred cccCCCcceEEE--ECCEEEEEcCCCCCEEEEEECCCC
Confidence 234555 455566655 4789999998875
No 204
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=98.94 E-value=2.1e-08 Score=60.61 Aligned_cols=102 Identities=16% Similarity=0.071 Sum_probs=80.0
Q ss_pred CCCCEEEEEcCC-----CcEEEEEcCCCCCcEEEeeccCCeeEEEEccCCCEEEEee----------CCCcEEEeeCCCC
Q 045566 8 DDGTTVFSGGCD-----KQVKMWPLLSGGQPVTVAMHDAPIKEVAWIPEMNLLATGS----------WDKTLKYWDTRQP 72 (112)
Q Consensus 8 ~~~~~l~~~~~~-----~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~----------~~~~i~~w~~~~~ 72 (112)
++++.+++.... +.|.++|..+.+.+.+++.-..+ .+.++|+++.++.+. .++.|.++|..+.
T Consensus 82 ~~~~~vyV~n~~~~~~~~~VsVID~~t~~vv~~I~vG~~P--gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~ 159 (426)
T 3c75_H 82 PDARRVYIQDPAHFAAITQQFVIDGSTGRILGMTDGGFLP--HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTF 159 (426)
T ss_dssp CCTTEEEEEECTTTCSSEEEEEEETTTTEEEEEEEECSSC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTC
T ss_pred CCCCEEEEECCCcCCCCCeEEEEECCCCEEEEEEECCCCC--ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCC
Confidence 366766666542 68999999999988888765555 899999999777665 3678999999999
Q ss_pred CceEEecCC----------CeEEEEeeCCCEEEEEeC--CCcEEEEECcCC
Q 045566 73 NPVHTQQLP----------DRCYALTVRYPLMVVGTA--DRNLVVFNLQNP 111 (112)
Q Consensus 73 ~~~~~~~~~----------~~~~~~~~~~~~~~~~~~--d~~v~~~d~~~~ 111 (112)
+.+..+..+ ...+.++|++++++++.. ++.|.+.|+.+.
T Consensus 160 ~vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~~~~~VsVID~~t~ 210 (426)
T 3c75_H 160 LPIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFSPAPAVGVVDLEGK 210 (426)
T ss_dssp CEEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECSSSCEEEEEETTTT
T ss_pred cEEEEEECCCccccccCCCcceEEEcCCCCEEEEEecCCCCeEEEEECCCC
Confidence 887765432 246789999999999875 578999999875
No 205
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.93 E-value=1.2e-07 Score=53.88 Aligned_cols=106 Identities=14% Similarity=0.048 Sum_probs=78.6
Q ss_pred eEEEcCCCCEEEEEcCCCcEEEEEcCCCCCcEEEeeccCCeeE--EEEccCCCEEEEeeCCCcEEEeeCCCCCceEEecC
Q 045566 3 CSTWKDDGTTVFSGGCDKQVKMWPLLSGGQPVTVAMHDAPIKE--VAWIPEMNLLATGSWDKTLKYWDTRQPNPVHTQQL 80 (112)
Q Consensus 3 ~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~--~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~ 80 (112)
.+.|+ ++.+..+.+.++.|+.+|+.+++....+ -. ..... +.+.. ...+...-.++.+.++|..+.+.+..+..
T Consensus 59 GL~~~-~~~Ly~stG~~g~v~~iD~~Tgkv~~~~-l~-~~~FgeGit~~g-~~Ly~ltw~~~~v~V~D~~Tl~~~~ti~~ 134 (268)
T 3nok_A 59 GLVFH-QGHFFESTGHQGTLRQLSLESAQPVWME-RL-GNIFAEGLASDG-ERLYQLTWTEGLLFTWSGMPPQRERTTRY 134 (268)
T ss_dssp EEEEE-TTEEEEEETTTTEEEECCSSCSSCSEEE-EC-TTCCEEEEEECS-SCEEEEESSSCEEEEEETTTTEEEEEEEC
T ss_pred eEEEE-CCEEEEEcCCCCEEEEEECCCCcEEeEE-CC-CCcceeEEEEeC-CEEEEEEccCCEEEEEECCcCcEEEEEeC
Confidence 45666 3566677788889999999999988776 22 23233 44432 34444555688999999999998888876
Q ss_pred CCeEEEEeeCCCEEEEEeCCCcEEEEECcCCC
Q 045566 81 PDRCYALTVRYPLMVVGTADRNLVVFNLQNPQ 112 (112)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~ 112 (112)
......+.+++..|+.+..++.|.++|..+.+
T Consensus 135 ~~eGwGLt~Dg~~L~vSdGs~~l~~iDp~T~~ 166 (268)
T 3nok_A 135 SGEGWGLCYWNGKLVRSDGGTMLTFHEPDGFA 166 (268)
T ss_dssp SSCCCCEEEETTEEEEECSSSEEEEECTTTCC
T ss_pred CCceeEEecCCCEEEEECCCCEEEEEcCCCCe
Confidence 66556667888889888888999999988754
No 206
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=98.92 E-value=1.2e-07 Score=56.99 Aligned_cols=108 Identities=11% Similarity=-0.008 Sum_probs=75.9
Q ss_pred eeEEEcCCCCEEEEEcCCCcEEEEEcCCCCCcEEEeeccCCeeEEEEccCCCEEEEeeCCC--cEEEeeCCCCCceEEe-
Q 045566 2 LCSTWKDDGTTVFSGGCDKQVKMWPLLSGGQPVTVAMHDAPIKEVAWIPEMNLLATGSWDK--TLKYWDTRQPNPVHTQ- 78 (112)
Q Consensus 2 ~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~--~i~~w~~~~~~~~~~~- 78 (112)
..++|+++++++++...++.|+.||..++........ ..... ++|++++..++.+..++ .|..++..........
T Consensus 134 ~~la~d~~g~lyv~d~~~~~I~~id~~~g~~~~~~~~-~~~~~-ia~~~~g~~l~~~d~~~~~~I~~~d~~~~~~~~~~g 211 (409)
T 3hrp_A 134 WGIAAVGNNTVLAYQRDDPRVRLISVDDNKVTTVHPG-FKGGK-PAVTKDKQRVYSIGWEGTHTVYVYMKASGWAPTRIG 211 (409)
T ss_dssp EEEEECSTTEEEEEETTTTEEEEEETTTTEEEEEEET-CCBCB-CEECTTSSEEEEEBSSTTCEEEEEEGGGTTCEEEEE
T ss_pred eEEEEeCCCCEEEEecCCCcEEEEECCCCEEEEeecc-CCCCc-eeEecCCCcEEEEecCCCceEEEEEcCCCceeEEee
Confidence 4688999999888888889999999875544333332 23334 89999999888877755 7888887665443332
Q ss_pred ---c---CCCeEEEEeeCCCEEEEEeCCCcEEEEECcCC
Q 045566 79 ---Q---LPDRCYALTVRYPLMVVGTADRNLVVFNLQNP 111 (112)
Q Consensus 79 ---~---~~~~~~~~~~~~~~~~~~~~d~~v~~~d~~~~ 111 (112)
. .....++++|++..++.+..++.|+.||..++
T Consensus 212 ~~~~~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~ 250 (409)
T 3hrp_A 212 QLGSTFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQ 250 (409)
T ss_dssp ECCTTSCSCCCBCEECTTSSEEEEECTTCEEEEEETTTC
T ss_pred eccchhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCC
Confidence 1 23356888885555666777888999998654
No 207
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=98.90 E-value=9e-08 Score=57.89 Aligned_cols=105 Identities=11% Similarity=0.077 Sum_probs=74.8
Q ss_pred eEEEcCCCCEEEEEc----------CCCcEEEEEcCCCCCcEEEeec-------cCCeeEEEEccCCCEEEEeeC--CCc
Q 045566 3 CSTWKDDGTTVFSGG----------CDKQVKMWPLLSGGQPVTVAMH-------DAPIKEVAWIPEMNLLATGSW--DKT 63 (112)
Q Consensus 3 ~~~~~~~~~~l~~~~----------~~~~v~~~~~~~~~~~~~~~~~-------~~~v~~~~~~~~~~~~~~~~~--~~~ 63 (112)
.+.++|++++++++. .++.|.++|..+.+....+... ......+.++|++++++.+.. ++.
T Consensus 122 gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~~~~~ 201 (426)
T 3c75_H 122 HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFLPIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFSPAPA 201 (426)
T ss_dssp EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECSSSCE
T ss_pred ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCcEEEEEECCCccccccCCCcceEEEcCCCCEEEEEecCCCCe
Confidence 478999999888876 3678999999998887776532 123457889999999888764 578
Q ss_pred EEEeeCCCCCceEEecCCCeEEEEeeCC-CEEEEEeCCCcEEEEEC
Q 045566 64 LKYWDTRQPNPVHTQQLPDRCYALTVRY-PLMVVGTADRNLVVFNL 108 (112)
Q Consensus 64 i~~w~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~d~~v~~~d~ 108 (112)
|.+.|..+.+.+..+..+.. ....|.+ ..+++.+.||++.+.++
T Consensus 202 VsVID~~t~kvv~~I~v~g~-~~~~p~g~~~~v~~~~dG~~~~V~~ 246 (426)
T 3c75_H 202 VGVVDLEGKTFDRMLDVPDC-YHIFPASPTVFYMNCRDGSLARVDF 246 (426)
T ss_dssp EEEEETTTTEEEEEEECCSE-EEEEEEETTEEEEEETTSSEEEEEC
T ss_pred EEEEECCCCeEEEEEEcCCc-eeeccCCCcEEEEEcCCCCEEEEEC
Confidence 99999999888777765433 2233332 44555566666666555
No 208
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=98.88 E-value=2.4e-07 Score=53.17 Aligned_cols=109 Identities=7% Similarity=0.013 Sum_probs=74.6
Q ss_pred eeEEEc----CCCCEEEEE-cCCCcEEEEEcC-CCCC-----cEEEeecc-CCeeEEEEccCCCEEEEeeCCCcEEEeeC
Q 045566 2 LCSTWK----DDGTTVFSG-GCDKQVKMWPLL-SGGQ-----PVTVAMHD-APIKEVAWIPEMNLLATGSWDKTLKYWDT 69 (112)
Q Consensus 2 ~~~~~~----~~~~~l~~~-~~~~~v~~~~~~-~~~~-----~~~~~~~~-~~v~~~~~~~~~~~~~~~~~~~~i~~w~~ 69 (112)
..++|+ |+++.++.+ ..++.|.+|+.. .++. ...+..+. .....+++++++.++++...++.|..||.
T Consensus 175 ~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~~~~~~i~~~d~ 254 (314)
T 1pjx_A 175 NGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNLLVANWGSSHIEVFGP 254 (314)
T ss_dssp EEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCEEEEEETTTEEEEECT
T ss_pred ceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEEECCCCCCCCCCceEECCCCCEEEEEcCCCEEEEEcC
Confidence 357788 888765444 567899999975 2321 11122222 45678999999998888878889999998
Q ss_pred CCCCceEEecC---CCeEEEEeeCCCEEEEE-eCCCcEEEEECcC
Q 045566 70 RQPNPVHTQQL---PDRCYALTVRYPLMVVG-TADRNLVVFNLQN 110 (112)
Q Consensus 70 ~~~~~~~~~~~---~~~~~~~~~~~~~~~~~-~~d~~v~~~d~~~ 110 (112)
.+++.+..+.. ....++++++++.++++ ..++.|..|++..
T Consensus 255 ~~g~~~~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~l~~~~~~~ 299 (314)
T 1pjx_A 255 DGGQPKMRIRCPFEKPSNLHFKPQTKTIFVTEHENNAVWKFEWQR 299 (314)
T ss_dssp TCBSCSEEEECSSSCEEEEEECTTSSEEEEEETTTTEEEEEECSS
T ss_pred CCCcEeEEEeCCCCCceeEEECCCCCEEEEEeCCCCeEEEEeCCC
Confidence 86655444433 34577888899855554 4567899998764
No 209
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=98.87 E-value=2.4e-07 Score=52.67 Aligned_cols=103 Identities=9% Similarity=-0.031 Sum_probs=74.5
Q ss_pred eeEEEcCCCCEEEEEcCCCcEEEEEcCCCCCcEEEe--eccCCeeEEEEccCCCEEEEeeCCCcEEEeeCCCCCceEEec
Q 045566 2 LCSTWKDDGTTVFSGGCDKQVKMWPLLSGGQPVTVA--MHDAPIKEVAWIPEMNLLATGSWDKTLKYWDTRQPNPVHTQQ 79 (112)
Q Consensus 2 ~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~ 79 (112)
.+++++++|+.+++...++.|..|+.. ++ ...+. .....+..+++++++..+++...++.|..|+... + ...+.
T Consensus 18 ~~i~~d~~g~l~v~~~~~~~v~~~d~~-~~-~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~g-~-~~~~~ 93 (299)
T 2z2n_A 18 YGITVSDKGKVWITQHKANMISCINLD-GK-ITEYPLPTPDAKVMCLTISSDGEVWFTENAANKIGRITKKG-I-IKEYT 93 (299)
T ss_dssp EEEEECTTSCEEEEETTTTEEEEECTT-CC-EEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTTS-C-EEEEE
T ss_pred cceEECCCCCEEEEecCCCcEEEEcCC-CC-eEEecCCcccCceeeEEECCCCCEEEeCCCCCeEEEECCCC-c-EEEEe
Confidence 578899999988777767899999976 43 33322 2446788999999999888877788899998762 2 22222
Q ss_pred C-----CCeEEEEeeCCCEEEEEeCCCcEEEEEC
Q 045566 80 L-----PDRCYALTVRYPLMVVGTADRNLVVFNL 108 (112)
Q Consensus 80 ~-----~~~~~~~~~~~~~~~~~~~d~~v~~~d~ 108 (112)
. ....+++++++..+++...++.|..||.
T Consensus 94 ~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~ 127 (299)
T 2z2n_A 94 LPNPDSAPYGITEGPNGDIWFTEMNGNRIGRITD 127 (299)
T ss_dssp CSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT
T ss_pred CCCcCCCceeeEECCCCCEEEEecCCceEEEECC
Confidence 1 2356777888877777667788988886
No 210
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=98.86 E-value=3.1e-07 Score=52.20 Aligned_cols=104 Identities=11% Similarity=0.021 Sum_probs=73.7
Q ss_pred eeEEEcCCCCEEEEEcCCCcEEEEEcCCCCCcEEEe--eccCCeeEEEEccCCCEEEEeeCCCcEEEeeCCCCCceEE-e
Q 045566 2 LCSTWKDDGTTVFSGGCDKQVKMWPLLSGGQPVTVA--MHDAPIKEVAWIPEMNLLATGSWDKTLKYWDTRQPNPVHT-Q 78 (112)
Q Consensus 2 ~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~-~ 78 (112)
..+++++++..+++...++.|..|+.. ++ ...+. .....+..+.+.+++..+++...++.+..||. +++.... .
T Consensus 60 ~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~-~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~~~~~~~ 136 (299)
T 2z2n_A 60 MCLTISSDGEVWFTENAANKIGRITKK-GI-IKEYTLPNPDSAPYGITEGPNGDIWFTEMNGNRIGRITD-DGKIREYEL 136 (299)
T ss_dssp EEEEECTTSCEEEEETTTTEEEEECTT-SC-EEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEEEEC
T ss_pred eeEEECCCCCEEEeCCCCCeEEEECCC-Cc-EEEEeCCCcCCCceeeEECCCCCEEEEecCCceEEEECC-CCCEEEecC
Confidence 467888999988877778889999865 32 22222 23456889999999988888777888999998 4433221 1
Q ss_pred c---CCCeEEEEeeCCCEEEEEeCCCcEEEEEC
Q 045566 79 Q---LPDRCYALTVRYPLMVVGTADRNLVVFNL 108 (112)
Q Consensus 79 ~---~~~~~~~~~~~~~~~~~~~~d~~v~~~d~ 108 (112)
. .....+++++++..+++...++.|..||.
T Consensus 137 ~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~ 169 (299)
T 2z2n_A 137 PNKGSYPSFITLGSDNALWFTENQNNAIGRITE 169 (299)
T ss_dssp SSTTCCEEEEEECTTSCEEEEETTTTEEEEECT
T ss_pred CCCCCCCceEEEcCCCCEEEEeCCCCEEEEEcC
Confidence 1 12356778888877766666788888887
No 211
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.86 E-value=2.4e-07 Score=52.51 Aligned_cols=108 Identities=10% Similarity=0.069 Sum_probs=77.6
Q ss_pred eEEEcCCCCEEEEEcCCC--cEEEEEcCCCCCcEEEeeccCCeeEEEEccCCCEE-EEeeCCCcEEEeeCCCCCceEEec
Q 045566 3 CSTWKDDGTTVFSGGCDK--QVKMWPLLSGGQPVTVAMHDAPIKEVAWIPEMNLL-ATGSWDKTLKYWDTRQPNPVHTQQ 79 (112)
Q Consensus 3 ~~~~~~~~~~l~~~~~~~--~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~-~~~~~~~~i~~w~~~~~~~~~~~~ 79 (112)
.+.|+ ++.++.+.+.++ .|+.+|+.+++....+.... ........+.+..+ ...-.++.+.++|..+.+.+..+.
T Consensus 47 GL~~~-~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~~-~~FgeGit~~g~~ly~ltw~~~~v~v~D~~t~~~~~ti~ 124 (262)
T 3nol_A 47 GFFYR-NGYFYESTGLNGRSSIRKVDIESGKTLQQIELGK-RYFGEGISDWKDKIVGLTWKNGLGFVWNIRNLRQVRSFN 124 (262)
T ss_dssp EEEEE-TTEEEEEEEETTEEEEEEECTTTCCEEEEEECCT-TCCEEEEEEETTEEEEEESSSSEEEEEETTTCCEEEEEE
T ss_pred eEEEE-CCEEEEECCCCCCceEEEEECCCCcEEEEEecCC-ccceeEEEEeCCEEEEEEeeCCEEEEEECccCcEEEEEE
Confidence 46777 566666666665 89999999999887765432 22332233334444 444458889999999999998887
Q ss_pred CCCeEEEEeeCCCEEEEEeCCCcEEEEECcCCC
Q 045566 80 LPDRCYALTVRYPLMVVGTADRNLVVFNLQNPQ 112 (112)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~ 112 (112)
.+.....+.+++..++.+..++.|.++|..+.+
T Consensus 125 ~~~eG~glt~dg~~L~~SdGs~~i~~iDp~T~~ 157 (262)
T 3nol_A 125 YDGEGWGLTHNDQYLIMSDGTPVLRFLDPESLT 157 (262)
T ss_dssp CSSCCCCEEECSSCEEECCSSSEEEEECTTTCS
T ss_pred CCCCceEEecCCCEEEEECCCCeEEEEcCCCCe
Confidence 766666777888888888778889999988753
No 212
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.85 E-value=6.6e-07 Score=50.27 Aligned_cols=108 Identities=13% Similarity=0.052 Sum_probs=77.3
Q ss_pred eEEEcCCCCEEEEEcCC--CcEEEEEcCCCCCcEEEeeccCCe-eEEEEccCCCEEEEeeCCCcEEEeeCCCCCceEEec
Q 045566 3 CSTWKDDGTTVFSGGCD--KQVKMWPLLSGGQPVTVAMHDAPI-KEVAWIPEMNLLATGSWDKTLKYWDTRQPNPVHTQQ 79 (112)
Q Consensus 3 ~~~~~~~~~~l~~~~~~--~~v~~~~~~~~~~~~~~~~~~~~v-~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~ 79 (112)
.+.|++ +.+..+.+.. ..|+.+|+.+++............ ..+... .+..+...-.++.+.++|..+.+.+..+.
T Consensus 25 GL~~~~-~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~~-~~~ly~ltw~~~~v~v~D~~tl~~~~ti~ 102 (243)
T 3mbr_X 25 GLFYLR-GHLYESTGETGRSSVRKVDLETGRILQRAEVPPPYFGAGIVAW-RDRLIQLTWRNHEGFVYDLATLTPRARFR 102 (243)
T ss_dssp EEEEET-TEEEEEECCTTSCEEEEEETTTCCEEEEEECCTTCCEEEEEEE-TTEEEEEESSSSEEEEEETTTTEEEEEEE
T ss_pred cEEEEC-CEEEEECCCCCCceEEEEECCCCCEEEEEeCCCCcceeEEEEe-CCEEEEEEeeCCEEEEEECCcCcEEEEEe
Confidence 467775 5555666654 489999999998887765332221 223333 23444455568899999999999888887
Q ss_pred CCCeEEEEeeCCCEEEEEeCCCcEEEEECcCCC
Q 045566 80 LPDRCYALTVRYPLMVVGTADRNLVVFNLQNPQ 112 (112)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~ 112 (112)
.+.....+.+++..++++..++.|.++|..+.+
T Consensus 103 ~~~~Gwglt~dg~~L~vSdgs~~l~~iDp~t~~ 135 (243)
T 3mbr_X 103 YPGEGWALTSDDSHLYMSDGTAVIRKLDPDTLQ 135 (243)
T ss_dssp CSSCCCEEEECSSCEEEECSSSEEEEECTTTCC
T ss_pred CCCCceEEeeCCCEEEEECCCCeEEEEeCCCCe
Confidence 766667777888888888888999999988753
No 213
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=98.83 E-value=6.6e-10 Score=65.82 Aligned_cols=101 Identities=13% Similarity=0.096 Sum_probs=60.3
Q ss_pred CCCEEEEEcCCCcEEEEEcCCCCCcEEEeeccCCeeEEEEccCCCEEEEeeCCCcEEEeeCCCCCceEEecCCCe-----
Q 045566 9 DGTTVFSGGCDKQVKMWPLLSGGQPVTVAMHDAPIKEVAWIPEMNLLATGSWDKTLKYWDTRQPNPVHTQQLPDR----- 83 (112)
Q Consensus 9 ~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~~----- 83 (112)
++..+++++.|+.|..||..+++....+.. ..+.+..+..++..++.++.|+.++.||..+++.+........
T Consensus 8 ~~~~v~~gs~dg~v~a~d~~tG~~~W~~~~--~~~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~~w~~~~~~~~~~~~ 85 (369)
T 2hz6_A 8 PETLLFVSTLDGSLHAVSKRTGSIKWTLKE--DPVLQVPTHVEEPAFLPDPNDGSLYTLGSKNNEGLTKLPFTIPELVQA 85 (369)
T ss_dssp CTTEEEEEETTSEEEEEETTTCCEEEEEEC--CCSCCCC-----CCEEECTTTCCEEEC-----CCSEECSCCHHHHHTT
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEecC--CCceecceEcCCCEEEEeCCCCEEEEEECCCCceeeeeeccCcccccc
Confidence 678899999999999999999998877765 4444444555677777888999999999988876655433210
Q ss_pred EEEEeeCCCEEEEEeCCCcEEEEECcCCC
Q 045566 84 CYALTVRYPLMVVGTADRNLVVFNLQNPQ 112 (112)
Q Consensus 84 ~~~~~~~~~~~~~~~~d~~v~~~d~~~~~ 112 (112)
...+. .+..+++++.++.++.||.++|+
T Consensus 86 sp~~~-~~~~v~~g~~dg~v~a~D~~tG~ 113 (369)
T 2hz6_A 86 SPCRS-SDGILYMGKKQDIWYVIDLLTGE 113 (369)
T ss_dssp CSCC------CCCCEEEEEEEEECCC---
T ss_pred CceEe-cCCEEEEEeCCCEEEEEECCCCc
Confidence 11111 23456667777778888877663
No 214
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=98.82 E-value=3.5e-07 Score=52.49 Aligned_cols=108 Identities=11% Similarity=0.017 Sum_probs=71.6
Q ss_pred eeEEEcCCCCEEEEEcCC---------------CcEEEEEcCCCCCcEEEeeccCCeeEEEEc----cCCCEE-EEeeCC
Q 045566 2 LCSTWKDDGTTVFSGGCD---------------KQVKMWPLLSGGQPVTVAMHDAPIKEVAWI----PEMNLL-ATGSWD 61 (112)
Q Consensus 2 ~~~~~~~~~~~l~~~~~~---------------~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~----~~~~~~-~~~~~~ 61 (112)
.+++++++|+.+++...+ +.|..++.. ++ ...+.........++++ |+++.+ ++...+
T Consensus 120 ~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~-~~~~~~~~~~~~~i~~~~~~d~dg~~l~v~~~~~ 197 (314)
T 1pjx_A 120 NDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQ-MIQVDTAFQFPNGIAVRHMNDGRPYQLIVAETPT 197 (314)
T ss_dssp CEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SC-EEEEEEEESSEEEEEEEECTTSCEEEEEEEETTT
T ss_pred cCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-CC-EEEeccCCCCcceEEEecccCCCCCEEEEEECCC
Confidence 578899999888777654 456666654 33 33333344456789999 988655 444567
Q ss_pred CcEEEeeCC-CCC-----ceEEec----CCCeEEEEeeCCCEEEEEeCCCcEEEEECcCC
Q 045566 62 KTLKYWDTR-QPN-----PVHTQQ----LPDRCYALTVRYPLMVVGTADRNLVVFNLQNP 111 (112)
Q Consensus 62 ~~i~~w~~~-~~~-----~~~~~~----~~~~~~~~~~~~~~~~~~~~d~~v~~~d~~~~ 111 (112)
+.|.+|+.. +++ ....+. .....+++++++.++++...++.|..||.+++
T Consensus 198 ~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~~~~~~i~~~d~~~g 257 (314)
T 1pjx_A 198 KKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNLLVANWGSSHIEVFGPDGG 257 (314)
T ss_dssp TEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCEEEEEETTTEEEEECTTCB
T ss_pred CeEEEEECCCCCccccceEEEECCCCCCCCCCceEECCCCCEEEEEcCCCEEEEEcCCCC
Confidence 889999976 332 112222 12346778888987777777889999998743
No 215
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=98.80 E-value=4.8e-07 Score=57.95 Aligned_cols=109 Identities=10% Similarity=0.029 Sum_probs=70.8
Q ss_pred eeEEEcCCCCEEEEEcCCCc--------------EEEEEcCCCCCc--EEEee--ccCCeeEEEEccCCCEEEEeeCC--
Q 045566 2 LCSTWKDDGTTVFSGGCDKQ--------------VKMWPLLSGGQP--VTVAM--HDAPIKEVAWIPEMNLLATGSWD-- 61 (112)
Q Consensus 2 ~~~~~~~~~~~l~~~~~~~~--------------v~~~~~~~~~~~--~~~~~--~~~~v~~~~~~~~~~~~~~~~~~-- 61 (112)
..++|+|+ +.|+.++.+.. |.+|++.++... ..+.. +...+..+.|+|+|++++....+
T Consensus 212 ~~~~wspD-~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~ 290 (741)
T 1yr2_A 212 SGLAWLGN-DALLYSRFAEPKEGQAFQALNYNQTVWLHRLGTPQSADQPVFATPELPKRGHGASVSSDGRWVVITSSEGT 290 (741)
T ss_dssp CCCEESTT-SEEEEEECCCC--------CCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECTT
T ss_pred ccEEEECC-CEEEEEEecCcccccccccCCCCCEEEEEECCCCchhCEEEeccCCCCeEEEEEEECCCCCEEEEEEEccC
Confidence 46789999 88888766543 888988765532 22222 22347899999999988776644
Q ss_pred ---CcEEEeeCCCC--CceEEecC--CCeEEEEeeCCCEEEEEeCC----CcEEEEECcCC
Q 045566 62 ---KTLKYWDTRQP--NPVHTQQL--PDRCYALTVRYPLMVVGTAD----RNLVVFNLQNP 111 (112)
Q Consensus 62 ---~~i~~w~~~~~--~~~~~~~~--~~~~~~~~~~~~~~~~~~~d----~~v~~~d~~~~ 111 (112)
..+.+||+.++ +....+.. ......+.+++..++..+.+ +.|.+||+.++
T Consensus 291 ~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~dg~~l~~~s~~~~~~~~l~~~d~~~~ 351 (741)
T 1yr2_A 291 DPVNTVHVARVTNGKIGPVTALIPDLKAQWDFVDGVGDQLWFVSGDGAPLKKIVRVDLSGS 351 (741)
T ss_dssp CSCCEEEEEEEETTEECCCEEEECSSSSCEEEEEEETTEEEEEECTTCTTCEEEEEECSSS
T ss_pred CCcceEEEEECCCCCCcccEEecCCCCceEEEEeccCCEEEEEECCCCCCCEEEEEeCCCC
Confidence 37999998765 31222221 12222345888888777653 45999998763
No 216
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=98.74 E-value=1.6e-06 Score=49.86 Aligned_cols=98 Identities=15% Similarity=0.119 Sum_probs=69.9
Q ss_pred eeEEEcCCCCEEE-EEcCCCcEEEEEcC--CCCCc--EEE---eeccCCeeEEEEccCCCEEEEeeCCCcEEEeeCCCCC
Q 045566 2 LCSTWKDDGTTVF-SGGCDKQVKMWPLL--SGGQP--VTV---AMHDAPIKEVAWIPEMNLLATGSWDKTLKYWDTRQPN 73 (112)
Q Consensus 2 ~~~~~~~~~~~l~-~~~~~~~v~~~~~~--~~~~~--~~~---~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~ 73 (112)
+.++|+|+++.++ +.+.++.|..|++. ++... ..+ .........++++++|.++++....+.|..||..+++
T Consensus 152 ngi~~spdg~~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~~~~~v~~~d~~tG~ 231 (297)
T 3g4e_A 152 NGLDWSLDHKIFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVACYNGGRVIRLDPVTGK 231 (297)
T ss_dssp EEEEECTTSCEEEEEEGGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEEEETTTEEEEECTTTCC
T ss_pred cceEEcCCCCEEEEecCCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCEEEEEcCCCEEEEEcCCCce
Confidence 4689999998764 45667889999873 34321 111 2233456789999999988888778889999998888
Q ss_pred ceEEecCC---CeEEEEe-eCCCEEEEEeC
Q 045566 74 PVHTQQLP---DRCYALT-VRYPLMVVGTA 99 (112)
Q Consensus 74 ~~~~~~~~---~~~~~~~-~~~~~~~~~~~ 99 (112)
.+..+..+ ...++|. +++..|++++.
T Consensus 232 ~~~~i~~p~~~~t~~~f~g~d~~~L~vt~~ 261 (297)
T 3g4e_A 232 RLQTVKLPVDKTTSCCFGGKNYSEMYVTCA 261 (297)
T ss_dssp EEEEEECSSSBEEEEEEESGGGCEEEEEEB
T ss_pred EEEEEECCCCCceEEEEeCCCCCEEEEEcC
Confidence 77766554 3678887 77777666554
No 217
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=98.73 E-value=1.1e-07 Score=56.49 Aligned_cols=87 Identities=8% Similarity=-0.162 Sum_probs=69.9
Q ss_pred cEEEEEcCCCCCcEEEeeccCCeeEEEEccCCCEEEEee----------CCCcEEEeeCCCCCceEEecCC---------
Q 045566 21 QVKMWPLLSGGQPVTVAMHDAPIKEVAWIPEMNLLATGS----------WDKTLKYWDTRQPNPVHTQQLP--------- 81 (112)
Q Consensus 21 ~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~----------~~~~i~~w~~~~~~~~~~~~~~--------- 81 (112)
.|.+.|..+.+.+.++.....+ .+.++|+++.++.+. .++.|.+||..+.+.+..+..+
T Consensus 47 ~vsvID~~t~~v~~~i~vG~~P--~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~~~~~~g~ 124 (368)
T 1mda_H 47 ENWVSCAGCGVTLGHSLGAFLS--LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVGP 124 (368)
T ss_dssp EEEEEETTTTEEEEEEEECTTC--EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCSCCBSC
T ss_pred eEEEEECCCCeEEEEEeCCCCC--ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEECCCccccccCC
Confidence 7889999999988888765556 799999998887775 3688999999999988776432
Q ss_pred -CeEEEEeeCCCEEEEEeC--CCcEEE--EECc
Q 045566 82 -DRCYALTVRYPLMVVGTA--DRNLVV--FNLQ 109 (112)
Q Consensus 82 -~~~~~~~~~~~~~~~~~~--d~~v~~--~d~~ 109 (112)
...+.++|++++++++.. +..+.+ +|+.
T Consensus 125 ~P~~ia~SpDGk~lyVan~~~~~~v~V~~iD~~ 157 (368)
T 1mda_H 125 RVHIIGNCASSACLLFFLFGSSAAAGLSVPGAS 157 (368)
T ss_dssp CTTSEEECTTSSCEEEEECSSSCEEEEEETTTE
T ss_pred CcceEEEcCCCCEEEEEccCCCCeEEEEEEchh
Confidence 457899999999999875 345777 7764
No 218
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=98.70 E-value=2.1e-06 Score=48.81 Aligned_cols=106 Identities=8% Similarity=-0.030 Sum_probs=74.2
Q ss_pred eeEEEcCCCCEEEEEcCCCcEEEEEcCCCCCcE-EEeeccCCeeEEEEccCCCEEEEeeCCCcEEEeeCCCCCceE-Eec
Q 045566 2 LCSTWKDDGTTVFSGGCDKQVKMWPLLSGGQPV-TVAMHDAPIKEVAWIPEMNLLATGSWDKTLKYWDTRQPNPVH-TQQ 79 (112)
Q Consensus 2 ~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~-~~~ 79 (112)
.+++++++++..++...++.|..++.. ++... .+......+..+++.+++..+++...++.|..+|.. ++... ...
T Consensus 23 ~~i~~d~~g~l~v~~~~~~~v~~~~~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~v~~~d~~-g~~~~~~~~ 100 (300)
T 2qc5_A 23 YGITSSEDGKVWFTQHKANKISSLDQS-GRIKEFEVPTPDAKVMCLIVSSLGDIWFTENGANKIGKLSKK-GGFTEYPLP 100 (300)
T ss_dssp EEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEECS
T ss_pred ceeeECCCCCEEEEcCCCCeEEEECCC-CceEEEECCCCCCcceeEEECCCCCEEEEecCCCeEEEECCC-CCeEEecCC
Confidence 467889999988877778899999976 43322 122233568899999999888877778889999987 44321 111
Q ss_pred ---CCCeEEEEeeCCCEEEEEeCCCcEEEEECc
Q 045566 80 ---LPDRCYALTVRYPLMVVGTADRNLVVFNLQ 109 (112)
Q Consensus 80 ---~~~~~~~~~~~~~~~~~~~~d~~v~~~d~~ 109 (112)
.....+++.+++..+++...++.|..+|..
T Consensus 101 ~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~ 133 (300)
T 2qc5_A 101 QPDSGPYGITEGLNGDIWFTQLNGDRIGKLTAD 133 (300)
T ss_dssp STTCCEEEEEECSTTCEEEEETTTTEEEEECTT
T ss_pred CCCCCCccceECCCCCEEEEccCCCeEEEECCC
Confidence 123567777888877766667788888764
No 219
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=98.70 E-value=2.1e-06 Score=51.65 Aligned_cols=109 Identities=4% Similarity=-0.063 Sum_probs=71.4
Q ss_pred eeEEEcCCCCEEEEEcCCCcEEEEEcCCCCCcEEE-----eeccCC--eeEEEEcc-CCCEEEEeeCCCcEEEeeCCCCC
Q 045566 2 LCSTWKDDGTTVFSGGCDKQVKMWPLLSGGQPVTV-----AMHDAP--IKEVAWIP-EMNLLATGSWDKTLKYWDTRQPN 73 (112)
Q Consensus 2 ~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~-----~~~~~~--v~~~~~~~-~~~~~~~~~~~~~i~~w~~~~~~ 73 (112)
.+++++|++..|+.+..++.|..|+...+.. ..+ ...... ...++|+| ++.++++-..++.|+.|+.....
T Consensus 222 ~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~-~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~~~~~I~~~~~~g~~ 300 (409)
T 3hrp_A 222 GAVALDETEEWLYFVDSNKNFGRFNVKTQEV-TLIKQLELSGSLGTNPGPYLIYYFVDSNFYMSDQNLSSVYKITPDGEC 300 (409)
T ss_dssp CBCEECTTSSEEEEECTTCEEEEEETTTCCE-EEEEECCCCSCCCCSSCCEEEEETTTTEEEEEETTTTEEEEECTTCCE
T ss_pred EEEEEeCCCCeEEEEECCCcEEEEECCCCCE-EEEecccccCCCCCCccccEEEeCCCCEEEEEeCCCCEEEEEecCCCE
Confidence 4688999555555577788999999876553 222 111111 23899999 56677777778889999876431
Q ss_pred ceEEec----------------CCCeEEEEeeCCCEEEEEe-CCCcEEEEECcCC
Q 045566 74 PVHTQQ----------------LPDRCYALTVRYPLMVVGT-ADRNLVVFNLQNP 111 (112)
Q Consensus 74 ~~~~~~----------------~~~~~~~~~~~~~~~~~~~-~d~~v~~~d~~~~ 111 (112)
....-. .....+++++++.++++-. .++.|+.||+.++
T Consensus 301 ~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~~~~I~~~~~~~G 355 (409)
T 3hrp_A 301 EWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFKGYCLRKLDILDG 355 (409)
T ss_dssp EEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTTTCEEEEEETTTT
T ss_pred EEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCCCCEEEEEECCCC
Confidence 111111 1135688999999777766 7889999996554
No 220
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=98.69 E-value=2.2e-06 Score=48.73 Aligned_cols=104 Identities=9% Similarity=-0.017 Sum_probs=72.9
Q ss_pred eeEEEcCCCCEEEEEcCCCcEEEEEcCCCCCcEEEe--eccCCeeEEEEccCCCEEEEeeCCCcEEEeeCCCCCceEE-e
Q 045566 2 LCSTWKDDGTTVFSGGCDKQVKMWPLLSGGQPVTVA--MHDAPIKEVAWIPEMNLLATGSWDKTLKYWDTRQPNPVHT-Q 78 (112)
Q Consensus 2 ~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~-~ 78 (112)
..++++++++.+++...++.|..+|.. ++. ..+. .....+..+++.+++.++++...++.|..++.. ++.... .
T Consensus 65 ~~i~~~~~g~l~v~~~~~~~v~~~d~~-g~~-~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~ 141 (300)
T 2qc5_A 65 MCLIVSSLGDIWFTENGANKIGKLSKK-GGF-TEYPLPQPDSGPYGITEGLNGDIWFTQLNGDRIGKLTAD-GTIYEYDL 141 (300)
T ss_dssp EEEEECTTSCEEEEETTTTEEEEECTT-SCE-EEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTT-SCEEEEEC
T ss_pred eeEEECCCCCEEEEecCCCeEEEECCC-CCe-EEecCCCCCCCCccceECCCCCEEEEccCCCeEEEECCC-CCEEEccC
Confidence 467888889888777777889999876 443 3232 234568899999999988887778889999887 443321 2
Q ss_pred c---CCCeEEEEeeCCCEEEEEeCCCcEEEEEC
Q 045566 79 Q---LPDRCYALTVRYPLMVVGTADRNLVVFNL 108 (112)
Q Consensus 79 ~---~~~~~~~~~~~~~~~~~~~~d~~v~~~d~ 108 (112)
. .....+++++++...++...++.|..+|.
T Consensus 142 ~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~ 174 (300)
T 2qc5_A 142 PNKGSYPAFITLGSDNALWFTENQNNSIGRITN 174 (300)
T ss_dssp SSTTCCEEEEEECTTSSEEEEETTTTEEEEECT
T ss_pred CCCCCCceeEEECCCCCEEEEecCCCeEEEECC
Confidence 2 12356777888886665555778888876
No 221
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=98.69 E-value=4.7e-10 Score=66.42 Aligned_cols=105 Identities=8% Similarity=0.053 Sum_probs=50.2
Q ss_pred cCCCCEEEEEcCCCcEEEEEcCCCCCcEEEeeccC-CeeEEEEccCCCEEEEeeCCCcEEEeeCCCCCceEEecCCCeEE
Q 045566 7 KDDGTTVFSGGCDKQVKMWPLLSGGQPVTVAMHDA-PIKEVAWIPEMNLLATGSWDKTLKYWDTRQPNPVHTQQLPDRCY 85 (112)
Q Consensus 7 ~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~-~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~~~~ 85 (112)
..++..+++++.|+.+..||..+++.......+.. .+.+.-....+..+++++.++.+..||.++++.+..+.... ..
T Consensus 46 ~~~g~~~v~~s~dg~l~a~d~~tG~~~w~~~~~~~~~~~~sp~~~~~~~v~~g~~dg~v~a~D~~tG~~~w~~~~~~-~~ 124 (369)
T 2hz6_A 46 HVEEPAFLPDPNDGSLYTLGSKNNEGLTKLPFTIPELVQASPCRSSDGILYMGKKQDIWYVIDLLTGEKQQTLSSAF-AD 124 (369)
T ss_dssp ----CCEEECTTTCCEEEC-----CCSEECSCCHHHHHTTCSCC-----CCCCEEEEEEEEECCC---------------
T ss_pred EcCCCEEEEeCCCCEEEEEECCCCceeeeeeccCccccccCceEecCCEEEEEeCCCEEEEEECCCCcEEEEecCCC-cc
Confidence 34566777788999999999988887665542211 11000000124456777888999999999988776654432 23
Q ss_pred EEeeCCCEEEEEeCCCcEEEEECcCCC
Q 045566 86 ALTVRYPLMVVGTADRNLVVFNLQNPQ 112 (112)
Q Consensus 86 ~~~~~~~~~~~~~~d~~v~~~d~~~~~ 112 (112)
.+.|++..+++++.++.++.||.++++
T Consensus 125 ~~~p~~~~v~~~~~dg~v~a~d~~tG~ 151 (369)
T 2hz6_A 125 SLSPSTSLLYLGRTEYTITMYDTKTRE 151 (369)
T ss_dssp --------EEEEEEEEEEECCCSSSSS
T ss_pred cccccCCEEEEEecCCEEEEEECCCCC
Confidence 445677889999999999999998874
No 222
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=98.65 E-value=5.2e-06 Score=47.70 Aligned_cols=111 Identities=7% Similarity=0.014 Sum_probs=70.0
Q ss_pred eeEEEcCCCCEEEEEcCC---------CcEEEEEcCCCCCcEEEeeccCCeeEEEEccCCCEE-EEeeCCCcEEEeeCC-
Q 045566 2 LCSTWKDDGTTVFSGGCD---------KQVKMWPLLSGGQPVTVAMHDAPIKEVAWIPEMNLL-ATGSWDKTLKYWDTR- 70 (112)
Q Consensus 2 ~~~~~~~~~~~l~~~~~~---------~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~-~~~~~~~~i~~w~~~- 70 (112)
..++++|+|+++++.... ..-.+|.+........+.........++|+|+++.+ ++...++.|..|++.
T Consensus 101 ~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~~~~~~~~pngi~~spdg~~lyv~~~~~~~i~~~~~d~ 180 (297)
T 3g4e_A 101 NDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDHHVKKYFDQVDISNGLDWSLDHKIFYYIDSLSYSVDAFDYDL 180 (297)
T ss_dssp EEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTSCEEEEEEEESBEEEEEECTTSCEEEEEEGGGTEEEEEEECT
T ss_pred CCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCCCEEEEeeccccccceEEcCCCCEEEEecCCCCcEEEEeccC
Confidence 467899999976654321 234555544333333333344456889999999865 455567889999873
Q ss_pred -CCCce-----EEec---CCCeEEEEeeCCCEEEEEeCCCcEEEEECcCCC
Q 045566 71 -QPNPV-----HTQQ---LPDRCYALTVRYPLMVVGTADRNLVVFNLQNPQ 112 (112)
Q Consensus 71 -~~~~~-----~~~~---~~~~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~ 112 (112)
++... ..+. .....+++++++++.++...++.|..||..+++
T Consensus 181 ~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~~~~~v~~~d~~tG~ 231 (297)
T 3g4e_A 181 QTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVACYNGGRVIRLDPVTGK 231 (297)
T ss_dssp TTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEEEETTTEEEEECTTTCC
T ss_pred CCCcccCcEEEEECCCCCCCCCeeEECCCCCEEEEEcCCCEEEEEcCCCce
Confidence 33321 1111 123567888899877777677789999987653
No 223
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=98.63 E-value=1.3e-06 Score=51.23 Aligned_cols=109 Identities=15% Similarity=0.093 Sum_probs=70.9
Q ss_pred eeEEEcCCCCEEEEEcC--CCcEEEEEcCCCCCcEEEe-------eccCCeeEEEEccCCCEEEEeeC-----CCcEEEe
Q 045566 2 LCSTWKDDGTTVFSGGC--DKQVKMWPLLSGGQPVTVA-------MHDAPIKEVAWIPEMNLLATGSW-----DKTLKYW 67 (112)
Q Consensus 2 ~~~~~~~~~~~l~~~~~--~~~v~~~~~~~~~~~~~~~-------~~~~~v~~~~~~~~~~~~~~~~~-----~~~i~~w 67 (112)
..++++++|+.+++... ++.+++|.+.+++ +..++ .+...+..++++++++++++-.. +..|..|
T Consensus 20 ~~va~~~~g~~~v~~~~~~~~~~~l~~~~~g~-~~~~p~~~~~~~~~~~~p~gv~~d~~g~L~v~D~g~~~~~~~~i~~~ 98 (343)
T 2qe8_A 20 GNITLTPDGRLFLSLHQFYQPEMQVAELTQDG-LIPFPPQSGNAIITFDTVLGIKSDGNGIVWMLDNGNQSKSVPKLVAW 98 (343)
T ss_dssp EEEEECTTSCEEEEECGGGCCSCSEEEEETTE-EEESCCCCSSCCCCCSCEEEEEECSSSEEEEEECHHHHTSCCEEEEE
T ss_pred ceEEECCCCCEEEEeCCCCCCceEEEEECCCC-eecCCCcccCcccceeEeeEEEEcCCCcEEEEcCCCCcCCCCeEEEE
Confidence 46889999999888642 3424455443332 22221 23457899999999887765543 5789999
Q ss_pred eCCCCCceEEecCC---------CeEEEEeeCCCEEEEE-e---CCCcEEEEECcCC
Q 045566 68 DTRQPNPVHTQQLP---------DRCYALTVRYPLMVVG-T---ADRNLVVFNLQNP 111 (112)
Q Consensus 68 ~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~-~---~d~~v~~~d~~~~ 111 (112)
|+.+++.+..+..+ ...+++++++..++.+ . .++.|.+||+.++
T Consensus 99 d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g 155 (343)
T 2qe8_A 99 DTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTG 155 (343)
T ss_dssp ETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTC
T ss_pred ECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCC
Confidence 99887755554321 2567888765555444 4 5778999998765
No 224
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=98.58 E-value=6.3e-06 Score=47.48 Aligned_cols=107 Identities=7% Similarity=-0.040 Sum_probs=71.1
Q ss_pred eeEEEcCCCCEEEEEcCCCcEEEEEcCCCCCcEEEeec-----cCCeeEEEEccCCCEEEE----eeC------------
Q 045566 2 LCSTWKDDGTTVFSGGCDKQVKMWPLLSGGQPVTVAMH-----DAPIKEVAWIPEMNLLAT----GSW------------ 60 (112)
Q Consensus 2 ~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~-----~~~v~~~~~~~~~~~~~~----~~~------------ 60 (112)
..++++++|+++++...++.|..|+.. ++ ...+... ...+..+.++++|..+++ |..
T Consensus 89 ~gl~~d~dG~l~v~~~~~~~v~~~~~~-g~-~~~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~ 166 (305)
T 3dr2_A 89 NGNAVDAQQRLVHCEHGRRAITRSDAD-GQ-AHLLVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPEL 166 (305)
T ss_dssp EEEEECTTSCEEEEETTTTEEEEECTT-SC-EEEEECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSS
T ss_pred ceeeECCCCCEEEEECCCCEEEEECCC-CC-EEEEEeccCCCccCCCCCEEECCCCCEEEeCcCCCcccccccccccccc
Confidence 468899999977766666789999864 43 2222211 134568999999998886 332
Q ss_pred -CCcEEEeeCCCCCceEEe-cCCCeEEEEeeCCCEEEEEeCC------CcEEEEECcC
Q 045566 61 -DKTLKYWDTRQPNPVHTQ-QLPDRCYALTVRYPLMVVGTAD------RNLVVFNLQN 110 (112)
Q Consensus 61 -~~~i~~w~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~d------~~v~~~d~~~ 110 (112)
.+.|..+|..+++..... ......++|+|+++.++.+... +.|..||+..
T Consensus 167 ~~~~v~~~d~~~g~~~~~~~~~~p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~ 224 (305)
T 3dr2_A 167 AHHSVYRLPPDGSPLQRMADLDHPNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRD 224 (305)
T ss_dssp SCEEEEEECSSSCCCEEEEEESSEEEEEECTTSSEEEEEECCC---CCCEEEEEEEET
T ss_pred CCCeEEEEcCCCCcEEEEecCCCCcceEEcCCCCEEEEEecCCcCCCCCEEEEEEecC
Confidence 245777777555433221 1223568899999988777665 6799998753
No 225
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=98.56 E-value=7.8e-06 Score=47.10 Aligned_cols=91 Identities=11% Similarity=0.030 Sum_probs=64.2
Q ss_pred eEEEcCCCC-EEEEEcCCCcEEEEEcCCCCCcEEEeeccCCeeEEEEccCCCEEEEeeCCCcEEEeeCCCCCceEEe---
Q 045566 3 CSTWKDDGT-TVFSGGCDKQVKMWPLLSGGQPVTVAMHDAPIKEVAWIPEMNLLATGSWDKTLKYWDTRQPNPVHTQ--- 78 (112)
Q Consensus 3 ~~~~~~~~~-~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~--- 78 (112)
...|+|+++ .+++...++.|..|+. +++ ...+......+..+.++++++++++...++.|..|+.. ++.....
T Consensus 49 gp~~~~~g~~l~~~d~~~~~i~~~~~-~g~-~~~~~~~~~~~~gl~~d~dG~l~v~~~~~~~v~~~~~~-g~~~~~~~~~ 125 (305)
T 3dr2_A 49 GPAWWEAQRTLVWSDLVGRRVLGWRE-DGT-VDVLLDATAFTNGNAVDAQQRLVHCEHGRRAITRSDAD-GQAHLLVGRY 125 (305)
T ss_dssp EEEEEGGGTEEEEEETTTTEEEEEET-TSC-EEEEEESCSCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEECEE
T ss_pred CCeEeCCCCEEEEEECCCCEEEEEeC-CCC-EEEEeCCCCccceeeECCCCCEEEEECCCCEEEEECCC-CCEEEEEecc
Confidence 568999988 6677778899999986 343 34455556678999999999977766666789999875 3322111
Q ss_pred c----CCCeEEEEeeCCCEEEE
Q 045566 79 Q----LPDRCYALTVRYPLMVV 96 (112)
Q Consensus 79 ~----~~~~~~~~~~~~~~~~~ 96 (112)
. .....+.+++++.+.++
T Consensus 126 ~~~~~~~~~~i~~d~dG~l~~t 147 (305)
T 3dr2_A 126 AGKRLNSPNDLIVARDGAIWFT 147 (305)
T ss_dssp TTEECSCCCCEEECTTSCEEEE
T ss_pred CCCccCCCCCEEECCCCCEEEe
Confidence 1 12345788899987775
No 226
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=98.55 E-value=8.1e-06 Score=47.86 Aligned_cols=106 Identities=8% Similarity=0.012 Sum_probs=70.7
Q ss_pred eeEEEcCCCCEEEEEcC-----CCcEEEEEcCCCCCcEEEeec------cCCeeEEEEccC-CCEEEEee---CCCcEEE
Q 045566 2 LCSTWKDDGTTVFSGGC-----DKQVKMWPLLSGGQPVTVAMH------DAPIKEVAWIPE-MNLLATGS---WDKTLKY 66 (112)
Q Consensus 2 ~~~~~~~~~~~l~~~~~-----~~~v~~~~~~~~~~~~~~~~~------~~~v~~~~~~~~-~~~~~~~~---~~~~i~~ 66 (112)
..++++++++++++-.. +..|.+||+.+++....+... ......++++++ +..+++-. .++.|.+
T Consensus 70 ~gv~~d~~g~L~v~D~g~~~~~~~~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v 149 (343)
T 2qe8_A 70 LGIKSDGNGIVWMLDNGNQSKSVPKLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIR 149 (343)
T ss_dssp EEEEECSSSEEEEEECHHHHTSCCEEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEE
T ss_pred eEEEEcCCCcEEEEcCCCCcCCCCeEEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEE
Confidence 57889999887665543 578999998877755554321 234688999985 44555554 6788999
Q ss_pred eeCCCCCceEEecC--------------------------------CCeEEEEeeCCCEEEEEeCCC-cEEEEE
Q 045566 67 WDTRQPNPVHTQQL--------------------------------PDRCYALTVRYPLMVVGTADR-NLVVFN 107 (112)
Q Consensus 67 w~~~~~~~~~~~~~--------------------------------~~~~~~~~~~~~~~~~~~~d~-~v~~~d 107 (112)
||+.+++....... ....++++++++.++.+..++ .+..++
T Consensus 150 ~d~~~g~~~r~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~~~~~l~~~~ 223 (343)
T 2qe8_A 150 VDLQTGLAARVLQGYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPMHSTSMYRIK 223 (343)
T ss_dssp EETTTCCEEEECTTCTTTSCCSCCCEETTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEEESSCSEEEEEE
T ss_pred EECCCCCEEEEecCCCcccccccceeECCEEEEeccCCCceeceecccceeEeccCCCEEEEEeCCCCeEEEEE
Confidence 99876654332211 124578889998888887665 444443
No 227
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=98.51 E-value=3.9e-07 Score=54.19 Aligned_cols=104 Identities=6% Similarity=-0.002 Sum_probs=70.5
Q ss_pred eEEEcCCCCEEEEEc----------CCCcEEEEEcCCCCCcEEEeec-------cCCeeEEEEccCCCEEEEeeC--CCc
Q 045566 3 CSTWKDDGTTVFSGG----------CDKQVKMWPLLSGGQPVTVAMH-------DAPIKEVAWIPEMNLLATGSW--DKT 63 (112)
Q Consensus 3 ~~~~~~~~~~l~~~~----------~~~~v~~~~~~~~~~~~~~~~~-------~~~v~~~~~~~~~~~~~~~~~--~~~ 63 (112)
.+.++|++++++++. .++.|.++|+.+.+...++... ......+.++|++++++.+.. +..
T Consensus 69 ~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~~~~~~g~~P~~ia~SpDGk~lyVan~~~~~~ 148 (368)
T 1mda_H 69 LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVGPRVHIIGNCASSACLLFFLFGSSAA 148 (368)
T ss_dssp EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCSCCBSCCTTSEEECTTSSCEEEEECSSSCE
T ss_pred ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEECCCccccccCCCcceEEEcCCCCEEEEEccCCCCe
Confidence 478999999998886 3678999999999998887643 123467899999998888764 466
Q ss_pred EEE--eeCCCCCceEEecCCCeEEEEeeCCC-EEEEEeCCCcEEEEECcC
Q 045566 64 LKY--WDTRQPNPVHTQQLPDRCYALTVRYP-LMVVGTADRNLVVFNLQN 110 (112)
Q Consensus 64 i~~--w~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~d~~v~~~d~~~ 110 (112)
+.+ +|..+ +..+..+.. ..+.|++. .+++.+.|+.+.+.|+.+
T Consensus 149 v~V~~iD~~t---v~~i~v~~~-~~~~p~g~~~~~~~~~dg~~~~vd~~~ 194 (368)
T 1mda_H 149 AGLSVPGASD---DQLTKSASC-FHIHPGAAATHYLGSCPASLAASDLAA 194 (368)
T ss_dssp EEEEETTTEE---EEEEECSSC-CCCEEEETTEEECCCCTTSCEEEECCS
T ss_pred EEEEEEchhh---ceEEECCCc-eEEccCCCeEEEEEcCCCCEEEEECcc
Confidence 888 99876 333332211 22334432 344455677766666654
No 228
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=98.49 E-value=3e-06 Score=54.07 Aligned_cols=102 Identities=16% Similarity=0.147 Sum_probs=73.4
Q ss_pred CEEEEEcCCCcEEEEEcCCCCCcEEEeeccC-----------Ce------------------------eEEEEccCCCEE
Q 045566 11 TTVFSGGCDKQVKMWPLLSGGQPVTVAMHDA-----------PI------------------------KEVAWIPEMNLL 55 (112)
Q Consensus 11 ~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~-----------~v------------------------~~~~~~~~~~~~ 55 (112)
..++.++.+|.+.++|..+++.+........ ++ ..++++|+...+
T Consensus 328 ~~l~~~~~~G~l~~lD~~tG~~l~~~~~~~~~~~~~~d~~g~~~~~~~~~~~~~~~~~~P~~~G~~~w~~~a~dp~~~~~ 407 (677)
T 1kb0_A 328 KVILHAPKNGFFFVLDRTNGKFISAKNFVPVNWASGYDKHGKPIGIAAARDGSKPQDAVPGPYGAHNWHPMSFNPQTGLV 407 (677)
T ss_dssp EEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEECTTSCEEECGGGGCTTSCEECSSCTTCSSCSSCCEEETTTTEE
T ss_pred eEEEEECCCCEEEEEECCCCCEeccccccccCcccccCCCCceeeccccCcCCCccEECcCcccccCCCCceEcCCCCEE
Confidence 5688889999999999999888765432110 00 146778876666
Q ss_pred EEeeC-------------------------------------------CCcEEEeeCCCCCceEEecCC--CeEEEEeeC
Q 045566 56 ATGSW-------------------------------------------DKTLKYWDTRQPNPVHTQQLP--DRCYALTVR 90 (112)
Q Consensus 56 ~~~~~-------------------------------------------~~~i~~w~~~~~~~~~~~~~~--~~~~~~~~~ 90 (112)
+.... .+.|..||+.+++.+..+... .....+...
T Consensus 408 yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~~~~~~~g~~~~~ 487 (677)
T 1kb0_A 408 YLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWNTAKFFNAEPPKSKPFGRLLAWDPVAQKAAWSVEHVSPWNGGTLTTA 487 (677)
T ss_dssp EEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCCCCEEECSSCCCSCCEEEEEEEETTTTEEEEEEEESSSCCCCEEEET
T ss_pred EEeChhcceeeecccccccccccccccccccccccccccccccCCCCCccEEEEEeCCCCcEEeecCCCCCCcCcceEeC
Confidence 55432 167999999999877666433 334456667
Q ss_pred CCEEEEEeCCCcEEEEECcCCC
Q 045566 91 YPLMVVGTADRNLVVFNLQNPQ 112 (112)
Q Consensus 91 ~~~~~~~~~d~~v~~~d~~~~~ 112 (112)
+..++.++.|+.+++||.++++
T Consensus 488 g~~v~~g~~dg~l~a~D~~tG~ 509 (677)
T 1kb0_A 488 GNVVFQGTADGRLVAYHAATGE 509 (677)
T ss_dssp TTEEEEECTTSEEEEEETTTCC
T ss_pred CCEEEEECCCCcEEEEECCCCc
Confidence 8889999999999999999875
No 229
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.43 E-value=2e-05 Score=45.02 Aligned_cols=105 Identities=11% Similarity=0.018 Sum_probs=76.0
Q ss_pred EEcCCCCEEEEEcCCCcEEEEEcCCCCCcEEEeecc-----CCeeEEEEccCCCEEEEeeCCCcEEEeeCCCCCceEEec
Q 045566 5 TWKDDGTTVFSGGCDKQVKMWPLLSGGQPVTVAMHD-----APIKEVAWIPEMNLLATGSWDKTLKYWDTRQPNPVHTQQ 79 (112)
Q Consensus 5 ~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~-----~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~ 79 (112)
.++++++.++++..++.+.+.|..+.+....+.... .....+.|. ++..++....++.|.+.|..+++.+..+.
T Consensus 111 glt~Dg~~l~vs~gs~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~-dg~lyvn~~~~~~V~vID~~tg~V~~~I~ 189 (266)
T 2iwa_A 111 GLATDGKILYGSDGTSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYI-NGEVWANIWQTDCIARISAKDGTLLGWIL 189 (266)
T ss_dssp EEEECSSSEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTSSEEEEEETTTCCEEEEEE
T ss_pred EEEECCCEEEEECCCCeEEEEECCCCcEEEEEEECCCCcccccceeEEEE-CCEEEEecCCCCeEEEEECCCCcEEEEEE
Confidence 355677777777778899999998888777665221 135677777 67666666678899999999999877765
Q ss_pred CC----------------CeEEEEeeCCCEEEE-EeCCCcEEEEECcC
Q 045566 80 LP----------------DRCYALTVRYPLMVV-GTADRNLVVFNLQN 110 (112)
Q Consensus 80 ~~----------------~~~~~~~~~~~~~~~-~~~d~~v~~~d~~~ 110 (112)
.. ...+++++++..+++ +.....+...++.+
T Consensus 190 ~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~~~v~~i~l~~ 237 (266)
T 2iwa_A 190 LPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLWPKLFEIKLHL 237 (266)
T ss_dssp CHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETTCSEEEEEEEEE
T ss_pred CCCcccccccccccccCceEEEEEcCCCCEEEEECCCCCeEEEEEEec
Confidence 42 157899998875555 44677788777654
No 230
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=98.43 E-value=4e-05 Score=44.65 Aligned_cols=98 Identities=16% Similarity=0.148 Sum_probs=65.6
Q ss_pred eeEEEcCCCCEEEEE-cCCCcEEEEEcC--CC-CC--cEEEe---eccCCeeEEEEccCCCEEEEeeCCCcEEEeeCCCC
Q 045566 2 LCSTWKDDGTTVFSG-GCDKQVKMWPLL--SG-GQ--PVTVA---MHDAPIKEVAWIPEMNLLATGSWDKTLKYWDTRQP 72 (112)
Q Consensus 2 ~~~~~~~~~~~l~~~-~~~~~v~~~~~~--~~-~~--~~~~~---~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~ 72 (112)
..++|+|+++.++.+ ..++.|.+|+.. ++ .. ...+. ........+.+.+++.++++...++.|..|+. ++
T Consensus 182 ~~i~~s~dg~~lyv~~~~~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~lwva~~~~~~v~~~d~-~g 260 (326)
T 2ghs_A 182 NSICFSPDGTTGYFVDTKVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWGEGAVDRYDT-DG 260 (326)
T ss_dssp EEEEECTTSCEEEEEETTTCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEETTTEEEEECT-TC
T ss_pred CCeEEcCCCCEEEEEECCCCEEEEEEcccccCCcccCceEEEECCCCCCCCCeeEECCCCCEEEEEeCCCEEEEECC-CC
Confidence 467899999876544 567889999975 44 21 12221 12345678899999988877767788999998 45
Q ss_pred CceEEecCC---CeEEEEe-eCCCEEEEEeCC
Q 045566 73 NPVHTQQLP---DRCYALT-VRYPLMVVGTAD 100 (112)
Q Consensus 73 ~~~~~~~~~---~~~~~~~-~~~~~~~~~~~d 100 (112)
+.+..+..+ ...++|. +++..+++++..
T Consensus 261 ~~~~~i~~~~~~~~~~af~g~d~~~L~vt~~~ 292 (326)
T 2ghs_A 261 NHIARYEVPGKQTTCPAFIGPDASRLLVTSAR 292 (326)
T ss_dssp CEEEEEECSCSBEEEEEEESTTSCEEEEEEBC
T ss_pred CEEEEEECCCCCcEEEEEecCCCCEEEEEecC
Confidence 555555433 3577887 777777665543
No 231
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=98.41 E-value=7.4e-05 Score=47.82 Aligned_cols=109 Identities=19% Similarity=0.166 Sum_probs=67.9
Q ss_pred eeEEEcCCCCEEEEEcCCC-------------cEEEEEcCCCCCcE--EEe--e-ccCCeeEEEEccCCCEEEEee----
Q 045566 2 LCSTWKDDGTTVFSGGCDK-------------QVKMWPLLSGGQPV--TVA--M-HDAPIKEVAWIPEMNLLATGS---- 59 (112)
Q Consensus 2 ~~~~~~~~~~~l~~~~~~~-------------~v~~~~~~~~~~~~--~~~--~-~~~~v~~~~~~~~~~~~~~~~---- 59 (112)
..++|+ |++.|+.++.+. .|.+|++.+..... .+. . +......+.++|++++++...
T Consensus 178 ~~~~Ws-Dg~~l~y~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~ 256 (693)
T 3iuj_A 178 SGISWL-GNEGFFYSSYDKPDGSELSARTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANST 256 (693)
T ss_dssp CCCEEE-TTTEEEEEESSCCC-------CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSS
T ss_pred ccEEEe-CCCEEEEEEecCcccccccccCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCC
Confidence 357899 999888887663 48899987655322 222 2 233467899999999775432
Q ss_pred CCCcEEEeeCCCCC-ceEEecC--CCeEEEEeeCCCEEEEEe-CC---CcEEEEECcCC
Q 045566 60 WDKTLKYWDTRQPN-PVHTQQL--PDRCYALTVRYPLMVVGT-AD---RNLVVFNLQNP 111 (112)
Q Consensus 60 ~~~~i~~w~~~~~~-~~~~~~~--~~~~~~~~~~~~~~~~~~-~d---~~v~~~d~~~~ 111 (112)
....++++|+.++. ....+.. ......+.+++..++..+ .+ +.|..+|+.++
T Consensus 257 ~~~~i~~~d~~~~~~~~~~l~~~~~~~~~~~~~~g~~l~~~t~~~~~~~~l~~~d~~~~ 315 (693)
T 3iuj_A 257 SGNRLYVKDLSQENAPLLTVQGDLDADVSLVDNKGSTLYLLTNRDAPNRRLVTVDAANP 315 (693)
T ss_dssp SCCEEEEEETTSTTCCCEEEECSSSSCEEEEEEETTEEEEEECTTCTTCEEEEEETTSC
T ss_pred CCcEEEEEECCCCCCceEEEeCCCCceEEEEeccCCEEEEEECCCCCCCEEEEEeCCCC
Confidence 23579999987653 2223222 222223666666555443 33 56888888765
No 232
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=98.41 E-value=4.7e-05 Score=44.38 Aligned_cols=104 Identities=4% Similarity=-0.127 Sum_probs=64.5
Q ss_pred eeEEEcCCCCEEEEEcC------CCcEEEEEcCCCCCcEEEeeccCCeeEEEEccCCCEEE-EeeCCCcEEEeeCC--CC
Q 045566 2 LCSTWKDDGTTVFSGGC------DKQVKMWPLLSGGQPVTVAMHDAPIKEVAWIPEMNLLA-TGSWDKTLKYWDTR--QP 72 (112)
Q Consensus 2 ~~~~~~~~~~~l~~~~~------~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~-~~~~~~~i~~w~~~--~~ 72 (112)
..++++|+|+++++... .+.|..++ ++ ....+.........++|+|+++.++ +...++.|.+|++. ++
T Consensus 137 ~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g-~~~~~~~~~~~~~~i~~s~dg~~lyv~~~~~~~I~~~d~~~~~G 213 (326)
T 2ghs_A 137 NDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KG-KVTKLFADISIPNSICFSPDGTTGYFVDTKVNRLMRVPLDARTG 213 (326)
T ss_dssp EEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TT-EEEEEEEEESSEEEEEECTTSCEEEEEETTTCEEEEEEBCTTTC
T ss_pred CCEEECCCCCEEEEeCCCcCCCCceEEEEEe--CC-cEEEeeCCCcccCCeEEcCCCCEEEEEECCCCEEEEEEcccccC
Confidence 46789999987665432 23455555 33 2333333334567899999998664 44557889999985 44
Q ss_pred -Cc-----eEEec---CCCeEEEEeeCCCEEEEEeCCCcEEEEEC
Q 045566 73 -NP-----VHTQQ---LPDRCYALTVRYPLMVVGTADRNLVVFNL 108 (112)
Q Consensus 73 -~~-----~~~~~---~~~~~~~~~~~~~~~~~~~~d~~v~~~d~ 108 (112)
.. ...+. .....+++++++.+.++...++.|..||.
T Consensus 214 l~~~~~~~~~~~~~~~~~p~gi~~d~~G~lwva~~~~~~v~~~d~ 258 (326)
T 2ghs_A 214 LPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWGEGAVDRYDT 258 (326)
T ss_dssp CBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEETTTEEEEECT
T ss_pred CcccCceEEEECCCCCCCCCeeEECCCCCEEEEEeCCCEEEEECC
Confidence 21 11121 11245677788876666666778999886
No 233
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=98.39 E-value=3.6e-05 Score=47.07 Aligned_cols=106 Identities=7% Similarity=0.075 Sum_probs=71.3
Q ss_pred EEEcCCCCEEEEEc-------------------CCCcEEEEEcCCCCCcEEEeec--cCCeeEEEE--ccCCCEEEEee-
Q 045566 4 STWKDDGTTVFSGG-------------------CDKQVKMWPLLSGGQPVTVAMH--DAPIKEVAW--IPEMNLLATGS- 59 (112)
Q Consensus 4 ~~~~~~~~~l~~~~-------------------~~~~v~~~~~~~~~~~~~~~~~--~~~v~~~~~--~~~~~~~~~~~- 59 (112)
+-|+|+++.+++.. ...+|.+||+.+++...++... ......+.| +|++++...++
T Consensus 193 ~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg~~g~~P~~i~f~~~Pdg~~aYV~~e 272 (462)
T 2ece_A 193 FWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTLGEENRMALELRPLHDPTKLMGFINMV 272 (462)
T ss_dssp EEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEESCTTEEEEEEEEECSSTTCCEEEEEEE
T ss_pred EEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeEEecCCCCCccceeEeeECCCCCEEEEEEe
Confidence 56799999888874 3678999999887666666532 123445555 99998776665
Q ss_pred -----CCCcEEEeeCCCCC--ceEE-----------e----------cCCCeEEEEeeCCCEEEEEeC-CCcEEEEECc
Q 045566 60 -----WDKTLKYWDTRQPN--PVHT-----------Q----------QLPDRCYALTVRYPLMVVGTA-DRNLVVFNLQ 109 (112)
Q Consensus 60 -----~~~~i~~w~~~~~~--~~~~-----------~----------~~~~~~~~~~~~~~~~~~~~~-d~~v~~~d~~ 109 (112)
.++.|.+|....+. .... + ......+.+++++++|+++.. .+.|.+||+.
T Consensus 273 ~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~lS~DGrfLYVSnrg~d~VavfdV~ 351 (462)
T 2ece_A 273 VSLKDLSSSIWLWFYEDGKWNAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDIDISLDDKFLYLSLWGIGEVRQYDIS 351 (462)
T ss_dssp EETTTCCEEEEEEEEETTEEEEEEEEEECCEECCSSCCGGGGGGTEECCCCCCEEECTTSCEEEEEETTTTEEEEEECS
T ss_pred eeccCCCceEEEEEecCCceeEEEEEeCCCccccccccccccccccCCCceeEEEECCCCCEEEEEeCCCCEEEEEEec
Confidence 56677765543321 0000 0 122456889999999988776 6789999985
No 234
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=98.36 E-value=1.4e-05 Score=51.16 Aligned_cols=51 Identities=16% Similarity=0.214 Sum_probs=40.1
Q ss_pred CcEEEeeCCCCCceEEecCC--CeEEEEeeCCCEEEEEeCCCcEEEEECcCCC
Q 045566 62 KTLKYWDTRQPNPVHTQQLP--DRCYALTVRYPLMVVGTADRNLVVFNLQNPQ 112 (112)
Q Consensus 62 ~~i~~w~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~ 112 (112)
+.+..||+.+++.+..+... .....+...+..++.++.|+.++.||.++++
T Consensus 455 g~l~A~D~~tG~~~W~~~~~~~~~~g~~~tagglvf~gt~dg~l~a~D~~tG~ 507 (689)
T 1yiq_A 455 GKLIAWDPVKQQAAWEVPYVTIFNGGTLSTAGNLVFEGSADGRVIAYAADTGE 507 (689)
T ss_dssp EEEEEEETTTTEEEEEEEESSSCCCCEEEETTTEEEEECTTSEEEEEETTTCC
T ss_pred eeEEEEECCCCCeEeEccCCCCccCccceECCCEEEEECCCCcEEEEECCCCc
Confidence 67999999999877665433 2333556678899999999999999999885
No 235
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=98.35 E-value=6.7e-06 Score=53.04 Aligned_cols=107 Identities=10% Similarity=0.049 Sum_probs=68.0
Q ss_pred eeEEEc-CCCCEEEEEcC-C----CcEEEEEcCCC-CCcE-EEeeccCCeeEEEEccCCCEEEEeeCC-----CcEEEee
Q 045566 2 LCSTWK-DDGTTVFSGGC-D----KQVKMWPLLSG-GQPV-TVAMHDAPIKEVAWIPEMNLLATGSWD-----KTLKYWD 68 (112)
Q Consensus 2 ~~~~~~-~~~~~l~~~~~-~----~~v~~~~~~~~-~~~~-~~~~~~~~v~~~~~~~~~~~~~~~~~~-----~~i~~w~ 68 (112)
...+|| |+|++++.... + ..|+++|+.++ +.+. .+.. ....+.|+|+++.++....+ ..|..++
T Consensus 177 ~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~~~~~---~~~~~~WspDg~~l~y~~~d~~~~~~~v~~~~ 253 (751)
T 2xe4_A 177 MEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIADKVSG---TNGEIVWGPDHTSLFYVTKDETLRENKVWRHV 253 (751)
T ss_dssp EEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCCCCEEE---ECSCCEECSSTTEEEEEEECTTCCEEEEEEEE
T ss_pred eeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCCccccC---ceeeEEEecCCCEEEEEEECCCCCCCEEEEEE
Confidence 357899 99998875532 2 35999999887 5321 1221 23568899999877665544 2577788
Q ss_pred CCCCCc--eEEecC--C--CeEEEEeeCCCEEEEEeC---CCcEEEEECcCC
Q 045566 69 TRQPNP--VHTQQL--P--DRCYALTVRYPLMVVGTA---DRNLVVFNLQNP 111 (112)
Q Consensus 69 ~~~~~~--~~~~~~--~--~~~~~~~~~~~~~~~~~~---d~~v~~~d~~~~ 111 (112)
+.+.+. ...+.. . .....+++++++|+.... ...|.++|+.++
T Consensus 254 lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~ 305 (751)
T 2xe4_A 254 MGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKG 305 (751)
T ss_dssp TTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSC
T ss_pred CCCCchhcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCC
Confidence 876542 222221 1 245678999998776553 345788888754
No 236
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.30 E-value=2.8e-05 Score=48.94 Aligned_cols=89 Identities=15% Similarity=0.089 Sum_probs=58.8
Q ss_pred cEEEEEcCC--CCC-cEEEeeccCCeeEEEEccCCCEEEEee-CCCcEEEeeCCCCC------------ceEEecC--CC
Q 045566 21 QVKMWPLLS--GGQ-PVTVAMHDAPIKEVAWIPEMNLLATGS-WDKTLKYWDTRQPN------------PVHTQQL--PD 82 (112)
Q Consensus 21 ~v~~~~~~~--~~~-~~~~~~~~~~v~~~~~~~~~~~~~~~~-~~~~i~~w~~~~~~------------~~~~~~~--~~ 82 (112)
.|.+.|..+ ++. +..++.. ....++.++|||++++..+ .+..+.++|+.+.+ ....... .-
T Consensus 255 ~V~VID~~~~~~~~~~~~Ipvg-~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~vG~gP 333 (595)
T 1fwx_A 255 GVKVVDGRKEASSLFTRYIPIA-NNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPELGLGP 333 (595)
T ss_dssp TEEEEECSGGGCCSSEEEEEEE-SSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCBCCSCE
T ss_pred cEEEEeCcccCCceeEEEEecC-CCceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEcCCCCCc
Confidence 467777766 444 3445432 3457899999999776554 68899999998542 1222221 23
Q ss_pred eEEEEeeCCCEEEEEeCCCcEEEEECcC
Q 045566 83 RCYALTVRYPLMVVGTADRNLVVFNLQN 110 (112)
Q Consensus 83 ~~~~~~~~~~~~~~~~~d~~v~~~d~~~ 110 (112)
..++|+++|....+.-.|+.|..||+.+
T Consensus 334 ~h~aF~~dG~aY~t~~ldsqV~kwdi~~ 361 (595)
T 1fwx_A 334 LHTAFDGRGNAYTSLFLDSQVVKWNIED 361 (595)
T ss_dssp EEEEECTTSEEEEEETTTTEEEEEEHHH
T ss_pred ceEEECCCCeEEEEEecCCcEEEEEhhH
Confidence 5788999994334455589999999764
No 237
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=98.28 E-value=2.5e-05 Score=49.95 Aligned_cols=76 Identities=12% Similarity=0.073 Sum_probs=56.1
Q ss_pred CcEEEEEcCCCCCcEEEeeccCCeeEEEEccCCCEEEEeeCCCcEEEeeCCCCCceEEecCCC----eEEEEeeCCCEEE
Q 045566 20 KQVKMWPLLSGGQPVTVAMHDAPIKEVAWIPEMNLLATGSWDKTLKYWDTRQPNPVHTQQLPD----RCYALTVRYPLMV 95 (112)
Q Consensus 20 ~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~----~~~~~~~~~~~~~ 95 (112)
+.|..||+.+++....++. ..+.....+...+..++.++.++.+++||.++++.+..+..+. ..+.+..+++.++
T Consensus 457 g~l~A~D~~tG~~~W~~~~-~~~~~~g~~~~~g~~v~~g~~dg~l~a~D~~tG~~lw~~~~~~~~~~~p~~y~~~G~~~v 535 (677)
T 1kb0_A 457 GRLLAWDPVAQKAAWSVEH-VSPWNGGTLTTAGNVVFQGTADGRLVAYHAATGEKLWEAPTGTGVVAAPSTYMVDGRQYV 535 (677)
T ss_dssp EEEEEEETTTTEEEEEEEE-SSSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEE
T ss_pred cEEEEEeCCCCcEEeecCC-CCCCcCcceEeCCCEEEEECCCCcEEEEECCCCceeeeeeCCCCcccCCEEEEeCCEEEE
Confidence 6789999998888776653 3333444455667788888999999999999999998886543 4566777886554
Q ss_pred E
Q 045566 96 V 96 (112)
Q Consensus 96 ~ 96 (112)
.
T Consensus 536 ~ 536 (677)
T 1kb0_A 536 S 536 (677)
T ss_dssp E
T ss_pred E
Confidence 4
No 238
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=98.25 E-value=4e-05 Score=46.88 Aligned_cols=104 Identities=11% Similarity=0.138 Sum_probs=73.0
Q ss_pred EEEcCCCCEEEEEcCC------CcEEEEEcCCCCCcEEEeeccCC---eeEEEEccCCCEEEEee---------------
Q 045566 4 STWKDDGTTVFSGGCD------KQVKMWPLLSGGQPVTVAMHDAP---IKEVAWIPEMNLLATGS--------------- 59 (112)
Q Consensus 4 ~~~~~~~~~l~~~~~~------~~v~~~~~~~~~~~~~~~~~~~~---v~~~~~~~~~~~~~~~~--------------- 59 (112)
+...|+| .++++..+ +.+.+.|..+.+.+.+......+ -..+.|+|+++.+++..
T Consensus 143 ~~~~pdG-i~Vs~~g~~~g~~~g~v~vlD~~T~~v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~ 221 (462)
T 2ece_A 143 VHCGPDA-IYISALGNEEGEGPGGILMLDHYSFEPLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEH 221 (462)
T ss_dssp EEECSSC-EEEEEEEETTSCSCCEEEEECTTTCCEEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTT
T ss_pred eeECCCe-EEEEcCCCcCCCCCCeEEEEECCCCeEEEEEccCCCCccccceEEECCCCCEEEEccCcCccccccccchhh
Confidence 4567888 66665554 78999999888887776522111 23577899999988885
Q ss_pred ----CCCcEEEeeCCCCCceEEecCCC-----eEE--EEeeCCCEEEEEeC------CCcEEEEEC
Q 045566 60 ----WDKTLKYWDTRQPNPVHTQQLPD-----RCY--ALTVRYPLMVVGTA------DRNLVVFNL 108 (112)
Q Consensus 60 ----~~~~i~~w~~~~~~~~~~~~~~~-----~~~--~~~~~~~~~~~~~~------d~~v~~~d~ 108 (112)
....|.+||+.+.+.+..+.... ..+ .++|+++++++++. +++|.+|..
T Consensus 222 ~~~~~~d~V~v~D~~~~k~~~tI~vg~~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~ 287 (462)
T 2ece_A 222 LKDRYGNRIHFWDLRKRKRIHSLTLGEENRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFY 287 (462)
T ss_dssp HHHHSCCEEEEEETTTTEEEEEEESCTTEEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEE
T ss_pred hhhccCCEEEEEECCCCcEeeEEecCCCCCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEe
Confidence 36889999999877676665531 223 34899998888774 557766543
No 239
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=98.24 E-value=0.00011 Score=43.37 Aligned_cols=101 Identities=13% Similarity=0.075 Sum_probs=69.2
Q ss_pred CCCEEEEEcCCCcEEEEEcCCCCCcEEEeec---------cCCeeEEEEccCCCEEEEeeCCCcEEEeeCCCCCceEEec
Q 045566 9 DGTTVFSGGCDKQVKMWPLLSGGQPVTVAMH---------DAPIKEVAWIPEMNLLATGSWDKTLKYWDTRQPNPVHTQQ 79 (112)
Q Consensus 9 ~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~---------~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~ 79 (112)
.+..+++++.++.|..+|..+++........ ...+... ...++..++.++.++.+..+|..+++.+....
T Consensus 52 ~~~~v~~~~~~g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~-~~~~~~~v~v~~~~g~l~a~d~~tG~~~W~~~ 130 (376)
T 3q7m_A 52 ADNVVYAADRAGLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGG-VTVSGGHVYIGSEKAQVYALNTSDGTVAWQTK 130 (376)
T ss_dssp ETTEEEEECTTSEEEEEETTTCCEEEEEECCC---CCSCCCCCEEEE-EEEETTEEEEEETTSEEEEEETTTCCEEEEEE
T ss_pred ECCEEEEEcCCCeEEEEEccCCceeeeecCccccccccccCcccccC-ceEeCCEEEEEcCCCEEEEEECCCCCEEEEEe
Confidence 4567788888899999999888877655432 1222221 12235567778889999999999998876664
Q ss_pred CCCe---EEEEeeCCCEEEEEeCCCcEEEEECcCCC
Q 045566 80 LPDR---CYALTVRYPLMVVGTADRNLVVFNLQNPQ 112 (112)
Q Consensus 80 ~~~~---~~~~~~~~~~~~~~~~d~~v~~~d~~~~~ 112 (112)
.... .... .+..+++++.++.+..+|.++++
T Consensus 131 ~~~~~~~~p~~--~~~~v~v~~~~g~l~~~d~~tG~ 164 (376)
T 3q7m_A 131 VAGEALSRPVV--SDGLVLIHTSNGQLQALNEADGA 164 (376)
T ss_dssp CSSCCCSCCEE--ETTEEEEECTTSEEEEEETTTCC
T ss_pred CCCceEcCCEE--ECCEEEEEcCCCeEEEEECCCCc
Confidence 4321 1111 24578888889999999988774
No 240
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=98.21 E-value=2.3e-05 Score=50.21 Aligned_cols=76 Identities=13% Similarity=0.068 Sum_probs=56.2
Q ss_pred CcEEEEEcCCCCCcEEEeeccCCeeEEEEccCCCEEEEeeCCCcEEEeeCCCCCceEEecCC----CeEEEEeeCCCEEE
Q 045566 20 KQVKMWPLLSGGQPVTVAMHDAPIKEVAWIPEMNLLATGSWDKTLKYWDTRQPNPVHTQQLP----DRCYALTVRYPLMV 95 (112)
Q Consensus 20 ~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~----~~~~~~~~~~~~~~ 95 (112)
+.+..||+.+++....++.+. +...-.+...+.+++.++.|+.++.||.++++.+..+..+ ...+.+..+|++++
T Consensus 455 g~l~A~D~~tG~~~W~~~~~~-~~~~g~~~tagglvf~gt~dg~l~a~D~~tG~~lw~~~~~~~~~~~p~ty~~~G~qyv 533 (689)
T 1yiq_A 455 GKLIAWDPVKQQAAWEVPYVT-IFNGGTLSTAGNLVFEGSADGRVIAYAADTGEKLWEQPAASGVMAAPVTYSVDGEQYV 533 (689)
T ss_dssp EEEEEEETTTTEEEEEEEESS-SCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEE
T ss_pred eeEEEEECCCCCeEeEccCCC-CccCccceECCCEEEEECCCCcEEEEECCCCccceeeeCCCCcccCceEEEECCEEEE
Confidence 679999999998877766443 2233345556778888999999999999999999887654 34567777887544
Q ss_pred E
Q 045566 96 V 96 (112)
Q Consensus 96 ~ 96 (112)
+
T Consensus 534 ~ 534 (689)
T 1yiq_A 534 T 534 (689)
T ss_dssp E
T ss_pred E
Confidence 3
No 241
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=98.19 E-value=6.5e-05 Score=44.37 Aligned_cols=102 Identities=16% Similarity=0.125 Sum_probs=67.2
Q ss_pred CCCEEEEEcCCCcEEEEEcCCCCCcEEEeeccCCeeEEEEccCCCEEEEeeCCCcEEEeeCCCCCceEEecCCCeEE---
Q 045566 9 DGTTVFSGGCDKQVKMWPLLSGGQPVTVAMHDAPIKEVAWIPEMNLLATGSWDKTLKYWDTRQPNPVHTQQLPDRCY--- 85 (112)
Q Consensus 9 ~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~~~~--- 85 (112)
++..+++++.++.|..+|..+++................. .+..++.++.++.+..+|..+++.+..........
T Consensus 102 ~~~~v~v~~~~g~l~a~d~~tG~~~W~~~~~~~~~~~p~~--~~~~v~v~~~~g~l~~~d~~tG~~~W~~~~~~~~~~~~ 179 (376)
T 3q7m_A 102 SGGHVYIGSEKAQVYALNTSDGTVAWQTKVAGEALSRPVV--SDGLVLIHTSNGQLQALNEADGAVKWTVNLDMPSLSLR 179 (376)
T ss_dssp ETTEEEEEETTSEEEEEETTTCCEEEEEECSSCCCSCCEE--ETTEEEEECTTSEEEEEETTTCCEEEEEECCC-----C
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEEeCCCceEcCCEE--ECCEEEEEcCCCeEEEEECCCCcEEEEEeCCCCceeec
Confidence 3456777888899999999888877655433221111111 23467777889999999999998876665432111
Q ss_pred ---EEeeCCCEEEEEeCCCcEEEEECcCCC
Q 045566 86 ---ALTVRYPLMVVGTADRNLVVFNLQNPQ 112 (112)
Q Consensus 86 ---~~~~~~~~~~~~~~d~~v~~~d~~~~~ 112 (112)
.....+..++++..++.+..+|.++++
T Consensus 180 ~~~~~~~~~~~v~~g~~~g~l~~~d~~tG~ 209 (376)
T 3q7m_A 180 GESAPTTAFGAAVVGGDNGRVSAVLMEQGQ 209 (376)
T ss_dssp CCCCCEEETTEEEECCTTTEEEEEETTTCC
T ss_pred CCCCcEEECCEEEEEcCCCEEEEEECCCCc
Confidence 111124567888888999999988764
No 242
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.09 E-value=3.4e-05 Score=48.60 Aligned_cols=98 Identities=10% Similarity=0.000 Sum_probs=66.4
Q ss_pred eeEEEcCCCCEEEEEc-CCCcEEEEEcCCCCC-----------cEEEeeccCCeeEEEEccCCCEEEEeeCCCcEEEeeC
Q 045566 2 LCSTWKDDGTTVFSGG-CDKQVKMWPLLSGGQ-----------PVTVAMHDAPIKEVAWIPEMNLLATGSWDKTLKYWDT 69 (112)
Q Consensus 2 ~~~~~~~~~~~l~~~~-~~~~v~~~~~~~~~~-----------~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~ 69 (112)
.++.++|||+++++++ .+.+|.++|+.+.+. +.....-......++|+++|....+...+..|..|++
T Consensus 280 hGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~vG~gP~h~aF~~dG~aY~t~~ldsqV~kwdi 359 (595)
T 1fwx_A 280 HGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPELGLGPLHTAFDGRGNAYTSLFLDSQVVKWNI 359 (595)
T ss_dssp CCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCBCCSCEEEEEECTTSEEEEEETTTTEEEEEEH
T ss_pred eEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEcCCCCCcceEEECCCCeEEEEEecCCcEEEEEh
Confidence 4689999999876654 678999999985421 1111122345678999999955566677999999998
Q ss_pred CC----------CCceEEecCCCe--------EEEEeeCCCEEEEEeC
Q 045566 70 RQ----------PNPVHTQQLPDR--------CYALTVRYPLMVVGTA 99 (112)
Q Consensus 70 ~~----------~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~ 99 (112)
.+ .+.+..+..+.. ...++++|++|++...
T Consensus 360 ~~a~~~~~g~~~~~vi~kidV~yqpGh~~~~~g~t~~~DGk~l~~~Nk 407 (595)
T 1fwx_A 360 EDAIRAYAGEKVDPIKDKLDVHYQPGHLKTVMGETLDATNDWLVCLSK 407 (595)
T ss_dssp HHHHHHHHTCSCCCEEEEEECSSCEEEEEETTTTSTTCCSSEEEEEES
T ss_pred hHhhhhhcccccceeEEEeecccccccceeccceEeCCCCCEEEEcCC
Confidence 76 445555544322 1234678999888755
No 243
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=98.05 E-value=0.0002 Score=45.02 Aligned_cols=52 Identities=13% Similarity=0.041 Sum_probs=37.9
Q ss_pred CCcEEEeeCCCCCceEEecCC--CeEEEEeeCCCEEEEEeCCCcEEEEECcCCC
Q 045566 61 DKTLKYWDTRQPNPVHTQQLP--DRCYALTVRYPLMVVGTADRNLVVFNLQNPQ 112 (112)
Q Consensus 61 ~~~i~~w~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~ 112 (112)
++.+..+|..+++.+..+... .....+...+..++.++.|+.++.+|.++++
T Consensus 443 ~g~l~a~D~~tG~~~W~~~~~~~~~~~~~~t~gg~v~~g~~dg~l~a~D~~tG~ 496 (571)
T 2ad6_A 443 MGQIRAFDLTTGKAKWTKWEKFAAWGGTLYTKGGLVWYATLDGYLKALDNKDGK 496 (571)
T ss_dssp CEEEEEECTTTCCEEEEEEESSCCCSBCEEETTTEEEEECTTSEEEEEETTTCC
T ss_pred CCeEEEEECCCCCEEEEecCCCCccceeEEECCCEEEEEcCCCeEEEEECCCCC
Confidence 477999999998887665432 2222233356778889999999999998875
No 244
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=97.98 E-value=0.00036 Score=44.50 Aligned_cols=109 Identities=12% Similarity=0.140 Sum_probs=68.2
Q ss_pred eEEEcC-CCCEEEEEcCCC-----------cEEEEEcCCCCC--cEEEee-ccCCeeEEEEccCCCEEEEeeC-CCcEEE
Q 045566 3 CSTWKD-DGTTVFSGGCDK-----------QVKMWPLLSGGQ--PVTVAM-HDAPIKEVAWIPEMNLLATGSW-DKTLKY 66 (112)
Q Consensus 3 ~~~~~~-~~~~l~~~~~~~-----------~v~~~~~~~~~~--~~~~~~-~~~~v~~~~~~~~~~~~~~~~~-~~~i~~ 66 (112)
..++.+ +++.++.|+.+. .+.+||..+++- +..... +......+++..++..++.|+. +..+.+
T Consensus 190 ~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~lyv~GG~~~~~v~~ 269 (656)
T 1k3i_A 190 AAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDAKKTSL 269 (656)
T ss_dssp EEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSCEEEECSSSTTCEEE
T ss_pred eEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCCCCccccccCCCCCCEEEeCCCCCCceEE
Confidence 355666 788888876432 578899876653 222322 2222335677788999988884 557999
Q ss_pred eeCCCCCceEEecCC----CeEEEEeeCCCEEEEEe-CC-----CcEEEEECcCC
Q 045566 67 WDTRQPNPVHTQQLP----DRCYALTVRYPLMVVGT-AD-----RNLVVFNLQNP 111 (112)
Q Consensus 67 w~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~-~d-----~~v~~~d~~~~ 111 (112)
||..+.+.......+ ....+..++++.++.|+ .+ ..+.+||..+.
T Consensus 270 yd~~t~~W~~~~~~~~~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~ 324 (656)
T 1k3i_A 270 YDSSSDSWIPGPDMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSK 324 (656)
T ss_dssp EEGGGTEEEECCCCSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTT
T ss_pred ecCcCCceeECCCCCccccccceEEecCCeEEEEeCcccCCcccccceEeCCCCC
Confidence 998776433222111 12344455888888887 34 46889998764
No 245
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=97.96 E-value=0.00051 Score=39.28 Aligned_cols=100 Identities=8% Similarity=-0.042 Sum_probs=65.9
Q ss_pred CCCEE-EEEcCCCcEEEEEcCCCCCcEEEeeccCCeeEEEEccCCCEEEEeeCCCcEEEeeCCCCCceEEecCCC-----
Q 045566 9 DGTTV-FSGGCDKQVKMWPLLSGGQPVTVAMHDAPIKEVAWIPEMNLLATGSWDKTLKYWDTRQPNPVHTQQLPD----- 82 (112)
Q Consensus 9 ~~~~l-~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~----- 82 (112)
.+..| ...-.++.+.++|..+.+.+.+++..... ..+ .+++..++.+..++.+.++|..+.+.+..+....
T Consensus 104 ~g~~Ly~ltw~~~~v~V~D~~Tl~~~~ti~~~~eG-wGL--t~Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V~~~g~~v 180 (268)
T 3nok_A 104 DGERLYQLTWTEGLLFTWSGMPPQRERTTRYSGEG-WGL--CYWNGKLVRSDGGTMLTFHEPDGFALVGAVQVKLRGQPV 180 (268)
T ss_dssp CSSCEEEEESSSCEEEEEETTTTEEEEEEECSSCC-CCE--EEETTEEEEECSSSEEEEECTTTCCEEEEEECEETTEEC
T ss_pred eCCEEEEEEccCCEEEEEECCcCcEEEEEeCCCce-eEE--ecCCCEEEEECCCCEEEEEcCCCCeEEEEEEeCCCCccc
Confidence 34444 44456789999999998888887743322 233 3567777777778999999999988777664421
Q ss_pred ---eEEEEeeCCCEEEEEeCCCcEEEEECcCCC
Q 045566 83 ---RCYALTVRYPLMVVGTADRNLVVFNLQNPQ 112 (112)
Q Consensus 83 ---~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~ 112 (112)
+.+.+. ++...+..-.+..|.+.|.++++
T Consensus 181 ~~lNeLe~~-dG~lyanvw~s~~I~vIDp~TG~ 212 (268)
T 3nok_A 181 ELINELECA-NGVIYANIWHSSDVLEIDPATGT 212 (268)
T ss_dssp CCEEEEEEE-TTEEEEEETTCSEEEEECTTTCB
T ss_pred ccccccEEe-CCEEEEEECCCCeEEEEeCCCCc
Confidence 223333 56544444357788888888764
No 246
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=97.96 E-value=0.00078 Score=41.14 Aligned_cols=102 Identities=10% Similarity=0.052 Sum_probs=70.1
Q ss_pred eeEEEcCCCCEEEEEcCCCcEEEEEcCCCCC----------cE--EEee------ccCCeeEEEEcc---CCCEEEEeeC
Q 045566 2 LCSTWKDDGTTVFSGGCDKQVKMWPLLSGGQ----------PV--TVAM------HDAPIKEVAWIP---EMNLLATGSW 60 (112)
Q Consensus 2 ~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~----------~~--~~~~------~~~~v~~~~~~~---~~~~~~~~~~ 60 (112)
..+..+|+|++||..+. ..|.+-.++.+.. +. .+.- ...+|..+.|+| .+..+++-..
T Consensus 69 ~qlvlSpsG~lLAl~g~-~~V~Vv~LP~~~~~~~~~~~~~~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVLts 147 (452)
T 3pbp_A 69 FHVISSTSGDLLCLFND-NEIFVMEVPWGYSNVEDVSIQDAFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVLKE 147 (452)
T ss_dssp CEEEECTTSSEEEEECS-SEEEEEECCTTCSCCCCHHHHHTTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEEET
T ss_pred eEEEECCCCCEEEEecC-CeEEEEEecCccccCcccccccccceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEEec
Confidence 45788999999998876 5788888773321 11 2221 246799999999 4668999999
Q ss_pred CCcEEEeeCCCCC--ceEEec------------CCCeEEEEeeCCCEEEEEe--CCCcEEE
Q 045566 61 DKTLKYWDTRQPN--PVHTQQ------------LPDRCYALTVRYPLMVVGT--ADRNLVV 105 (112)
Q Consensus 61 ~~~i~~w~~~~~~--~~~~~~------------~~~~~~~~~~~~~~~~~~~--~d~~v~~ 105 (112)
|+.|++||+.... +. .+. ..+.+++|..++-.|+..+ .+|.|+-
T Consensus 148 D~~Ir~yDl~~s~~~P~-~L~k~~~~fg~d~~~~ev~S~~Fg~~~lTLYvl~~t~~GDIYA 207 (452)
T 3pbp_A 148 DDTITMFDILNSQEKPI-VLNKPNNSFGLDARVNDITDLEFSKDGLTLYCLNTTEGGDIFA 207 (452)
T ss_dssp TSCEEEEETTCTTSCCE-EESCCCSEEESCSSCCCEEEEEECTTSSCEEEEECTTSCEEEE
T ss_pred CCEEEEEEcccCCCCCc-chhccccccCCCcccceEEEEEEcCCCcEEEEEecCCCCCEEE
Confidence 9999999997522 22 221 2345778877776666655 6677754
No 247
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=97.96 E-value=0.00047 Score=39.30 Aligned_cols=93 Identities=10% Similarity=0.059 Sum_probs=66.4
Q ss_pred EcCCCCEEEEEcCCCcEEEEEcCCCCCcEEEeec--c---CCeeEEEEccCCCEEEEeeCCCcEEEeeCCCCCceEEecC
Q 045566 6 WKDDGTTVFSGGCDKQVKMWPLLSGGQPVTVAMH--D---APIKEVAWIPEMNLLATGSWDKTLKYWDTRQPNPVHTQQL 80 (112)
Q Consensus 6 ~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~--~---~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~ 80 (112)
+++++..|+.+..+..+.++|..+.+....+... . ..++.+.+. +|..++..-.+..|.+.|.++++.+..+..
T Consensus 132 lt~dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~-~G~lyan~w~~~~I~vIDp~tG~V~~~Id~ 210 (262)
T 3nol_A 132 LTHNDQYLIMSDGTPVLRFLDPESLTPVRTITVTAHGEELPELNELEWV-DGEIFANVWQTNKIVRIDPETGKVTGIIDL 210 (262)
T ss_dssp EEECSSCEEECCSSSEEEEECTTTCSEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTSSEEEEECTTTCBEEEEEEC
T ss_pred EecCCCEEEEECCCCeEEEEcCCCCeEEEEEEeccCCccccccceeEEE-CCEEEEEEccCCeEEEEECCCCcEEEEEEC
Confidence 3456777777776788999998888877666432 1 234456775 677777666788999999999987766543
Q ss_pred C---------------CeEEEEeeCCCEEEEEeC
Q 045566 81 P---------------DRCYALTVRYPLMVVGTA 99 (112)
Q Consensus 81 ~---------------~~~~~~~~~~~~~~~~~~ 99 (112)
. -+.++++|++..|++.+.
T Consensus 211 ~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTGK 244 (262)
T 3nol_A 211 NGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTGK 244 (262)
T ss_dssp TTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEET
T ss_pred CcCccccccccCcCCceEEEEEcCCCCEEEEECC
Confidence 1 157899998877777665
No 248
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=97.93 E-value=0.00064 Score=44.11 Aligned_cols=70 Identities=17% Similarity=0.073 Sum_probs=45.9
Q ss_pred eEEEcCCCCEEEEEcCC-----CcEEEEEcCCCCCc--EEEe-eccCCeeEEEEccCCCEEEEeeC---CCcEEEeeCCC
Q 045566 3 CSTWKDDGTTVFSGGCD-----KQVKMWPLLSGGQP--VTVA-MHDAPIKEVAWIPEMNLLATGSW---DKTLKYWDTRQ 71 (112)
Q Consensus 3 ~~~~~~~~~~l~~~~~~-----~~v~~~~~~~~~~~--~~~~-~~~~~v~~~~~~~~~~~~~~~~~---~~~i~~w~~~~ 71 (112)
.++|+|+++.|+....+ ..|..+++.++... ..+. ........+.|+|++++++.... ...+.++|+.+
T Consensus 225 ~~~WspDg~~l~y~~~d~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~ 304 (751)
T 2xe4_A 225 EIVWGPDHTSLFYVTKDETLRENKVWRHVMGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRK 304 (751)
T ss_dssp CCEECSSTTEEEEEEECTTCCEEEEEEEETTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSS
T ss_pred eEEEecCCCEEEEEEECCCCCCCEEEEEECCCCchhcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCC
Confidence 57899999888776654 25777777665432 2222 22234567889999998775542 34577888876
Q ss_pred C
Q 045566 72 P 72 (112)
Q Consensus 72 ~ 72 (112)
+
T Consensus 305 ~ 305 (751)
T 2xe4_A 305 G 305 (751)
T ss_dssp C
T ss_pred C
Confidence 5
No 249
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=97.91 E-value=0.00064 Score=38.35 Aligned_cols=109 Identities=6% Similarity=-0.057 Sum_probs=63.9
Q ss_pred eeEEEcCCCCEEEEEcC---CCcEEEEEcCCCCCcEEEe-eccCCeeEEEEccCCCEE-EEeeCCCcEEEeeCCCCCceE
Q 045566 2 LCSTWKDDGTTVFSGGC---DKQVKMWPLLSGGQPVTVA-MHDAPIKEVAWIPEMNLL-ATGSWDKTLKYWDTRQPNPVH 76 (112)
Q Consensus 2 ~~~~~~~~~~~l~~~~~---~~~v~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~-~~~~~~~~i~~w~~~~~~~~~ 76 (112)
..++++|++..++.+.. .+.|..+++.. .....+. ........+++++++..+ ++-...+.|..+++.......
T Consensus 125 ~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg-~~~~~~~~~~~~~P~gia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~ 203 (267)
T 1npe_A 125 RGIVTDPVRGNLYWTDWNRDNPKIETSHMDG-TNRRILAQDNLGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQPGRRK 203 (267)
T ss_dssp EEEEEETTTTEEEEEECCSSSCEEEEEETTS-CCCEEEECTTCSCEEEEEEETTTTEEEEEETTTTEEEEEETTEEEEEE
T ss_pred cEEEEeeCCCEEEEEECCCCCcEEEEEecCC-CCcEEEEECCCCCCcEEEEcCCCCEEEEEECCCCEEEEEecCCCceEE
Confidence 35788986555544443 46788887653 3323332 223456889999976544 555567889999987543222
Q ss_pred EecCCCeEEEEeeCCCEEEEEeC-CCcEEEEECcCC
Q 045566 77 TQQLPDRCYALTVRYPLMVVGTA-DRNLVVFNLQNP 111 (112)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~-d~~v~~~d~~~~ 111 (112)
..........+..++..++.+.. ++.|..+|..++
T Consensus 204 ~~~~~~~P~gi~~d~~~lyva~~~~~~v~~~d~~~g 239 (267)
T 1npe_A 204 VLEGLQYPFAVTSYGKNLYYTDWKTNSVIAMDLAIS 239 (267)
T ss_dssp EEECCCSEEEEEEETTEEEEEETTTTEEEEEETTTT
T ss_pred EecCCCCceEEEEeCCEEEEEECCCCeEEEEeCCCC
Confidence 22221222233344566666654 578988988765
No 250
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=97.89 E-value=0.00061 Score=39.26 Aligned_cols=98 Identities=13% Similarity=0.053 Sum_probs=61.5
Q ss_pred EEEcCCCCEEEEEcCCCcEEEEEcCCCCCcEEEeeccCCeeEEEEccCCCEEEEeeCCCcEEEeeCCCCCceEEecCC--
Q 045566 4 STWKDDGTTVFSGGCDKQVKMWPLLSGGQPVTVAMHDAPIKEVAWIPEMNLLATGSWDKTLKYWDTRQPNPVHTQQLP-- 81 (112)
Q Consensus 4 ~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~-- 81 (112)
+...+++. +..++.++.+..+|.. ++....+......+.++...+++..++.. +.+..+| .+++.+......
T Consensus 142 ~~~~~~g~-l~vgt~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~d~~g~l~v~t---~~l~~~d-~~g~~~~~~~~~~~ 215 (330)
T 3hxj_A 142 PIVSEDGT-IYVGSNDNYLYAINPD-GTEKWRFKTNDAITSAASIGKDGTIYFGS---DKVYAIN-PDGTEKWNFYAGYW 215 (330)
T ss_dssp CEECTTSC-EEEECTTSEEEEECTT-SCEEEEEECSSCCCSCCEECTTCCEEEES---SSEEEEC-TTSCEEEEECCSSC
T ss_pred eEEcCCCE-EEEEcCCCEEEEECCC-CCEeEEEecCCCceeeeEEcCCCEEEEEe---CEEEEEC-CCCcEEEEEccCCc
Confidence 34444555 5557777889999977 66555555445556677777777765544 7788888 666655554432
Q ss_pred -CeEEEEeeCCCEEEEEeCCCcEEEEEC
Q 045566 82 -DRCYALTVRYPLMVVGTADRNLVVFNL 108 (112)
Q Consensus 82 -~~~~~~~~~~~~~~~~~~d~~v~~~d~ 108 (112)
...+...+++ .+..++.++.+..+|.
T Consensus 216 ~~~~~~~~~~g-~l~v~t~~~gl~~~~~ 242 (330)
T 3hxj_A 216 TVTRPAISEDG-TIYVTSLDGHLYAINP 242 (330)
T ss_dssp CCSCCEECTTS-CEEEEETTTEEEEECT
T ss_pred ceeceEECCCC-eEEEEcCCCeEEEECC
Confidence 3344555554 4566666777777763
No 251
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=97.87 E-value=0.00099 Score=39.30 Aligned_cols=109 Identities=6% Similarity=-0.062 Sum_probs=76.9
Q ss_pred eeEEE---cCCCCEEEEEc-------------CCCcEEEEEcC---CCCCcEEEe--e-----------ccCCeeEEEEc
Q 045566 2 LCSTW---KDDGTTVFSGG-------------CDKQVKMWPLL---SGGQPVTVA--M-----------HDAPIKEVAWI 49 (112)
Q Consensus 2 ~~~~~---~~~~~~l~~~~-------------~~~~v~~~~~~---~~~~~~~~~--~-----------~~~~v~~~~~~ 49 (112)
..+.| .|+++++++.. .+..|..||+. +++...... . .......++..
T Consensus 66 sGl~~~~~D~~grL~vv~~~~~af~~~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD 145 (334)
T 2p9w_A 66 SGLSLLTHDNSKRLFAVMKNAKSFNFADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQD 145 (334)
T ss_dssp EEEEESSSSSCCEEEEEEEETTTTCTTSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEEC
T ss_pred eEEEEeccCCCCcEEEEEcccccccccccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEEC
Confidence 35778 68877777543 25779999998 777665442 1 11247899999
Q ss_pred cCCCEEEEeeCC-CcEEEeeCCCCCceEEe-cC-------CCeEEEEeeCCCEEEEEeCCCcEEEEECcC
Q 045566 50 PEMNLLATGSWD-KTLKYWDTRQPNPVHTQ-QL-------PDRCYALTVRYPLMVVGTADRNLVVFNLQN 110 (112)
Q Consensus 50 ~~~~~~~~~~~~-~~i~~w~~~~~~~~~~~-~~-------~~~~~~~~~~~~~~~~~~~d~~v~~~d~~~ 110 (112)
++|+..++++.. +.|...+.......... .. ..+.+.++|++..|++....+.+..+|+++
T Consensus 146 ~~GnaYVt~s~~~~~I~rV~pdG~~~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD~~~ 215 (334)
T 2p9w_A 146 RDGNSYVAFALGMPAIARVSADGKTVSTFAWESGNGGQRPGYSGITFDPHSNKLIAFGGPRALTAFDVSK 215 (334)
T ss_dssp TTSCEEEEEEESSCEEEEECTTSCCEEEEEECCCCSSSCCSCSEEEEETTTTEEEEESSSSSEEEEECSS
T ss_pred CCCCEEEeCCCCCCeEEEEeCCCCEEeeeeecCCCcccccCcceEEEeCCCCEEEEEcCCCeEEEEcCCC
Confidence 999999988888 88777776544222111 11 135789999999998887799999999764
No 252
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=97.86 E-value=0.0005 Score=43.44 Aligned_cols=52 Identities=17% Similarity=0.137 Sum_probs=37.7
Q ss_pred CCcEEEeeCCCCCceEEecCC--CeEEEEeeCCCEEEEEeCCCcEEEEECcCCC
Q 045566 61 DKTLKYWDTRQPNPVHTQQLP--DRCYALTVRYPLMVVGTADRNLVVFNLQNPQ 112 (112)
Q Consensus 61 ~~~i~~w~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~ 112 (112)
++.+..||+.+++.+...... ...-.+...+..++.++.|+.++.||.++++
T Consensus 465 ~G~l~A~D~~tG~~~W~~~~~~~~~~g~~~tagglvf~g~~dg~l~A~D~~tG~ 518 (582)
T 1flg_A 465 VGSLRAMDPVSGKVVWEHKEHLPLWAGVLATAGNLVFTGTGDGYFKAFDAKSGK 518 (582)
T ss_dssp SEEEEEECTTTCCEEEEEEESSCCCSCCEEETTTEEEEECTTSEEEEEETTTCC
T ss_pred cceEEEEECCCCCEEEEecCCCCCcccceEeCCCEEEEECCCCcEEEEECCCCC
Confidence 577889999999877655432 2221223356788889999999999999885
No 253
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=97.83 E-value=0.00037 Score=44.67 Aligned_cols=52 Identities=17% Similarity=0.237 Sum_probs=39.5
Q ss_pred CCcEEEeeCCCCCceEEecCC--CeEEEEeeCCCEEEEEeCCCcEEEEECcCCC
Q 045566 61 DKTLKYWDTRQPNPVHTQQLP--DRCYALTVRYPLMVVGTADRNLVVFNLQNPQ 112 (112)
Q Consensus 61 ~~~i~~w~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~ 112 (112)
++.+..||+.+++.+...... .....+...+..++.++.|+.++.||.++++
T Consensus 437 ~g~l~A~D~~tG~~~W~~~~~~~~~~~~~~t~gg~vf~g~~dg~l~a~d~~tG~ 490 (668)
T 1kv9_A 437 SGALLAWDPVKQKAAWKVPYPTHWNGGTLSTAGNLVFQGTAAGQMHAYSADKGE 490 (668)
T ss_dssp EEEEEEEETTTTEEEEEEEESSSCCCCEEEETTTEEEEECTTSEEEEEETTTCC
T ss_pred cceEEEEeCCCCcEEEEccCCCCCcCceeEeCCCEEEEECCcccchhhhhhcCh
Confidence 377999999999877665432 2333455577889999999999999998875
No 254
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=97.82 E-value=0.0013 Score=41.87 Aligned_cols=52 Identities=12% Similarity=-0.011 Sum_probs=37.8
Q ss_pred CCcEEEeeCCCCCceEEecCC--CeEEEEeeCCCEEEEEeCCCcEEEEECcCCC
Q 045566 61 DKTLKYWDTRQPNPVHTQQLP--DRCYALTVRYPLMVVGTADRNLVVFNLQNPQ 112 (112)
Q Consensus 61 ~~~i~~w~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~ 112 (112)
.+.+..||+.+++.+...... ...-.+.-.+..++.++.|+.++.||.++++
T Consensus 452 ~G~l~A~D~~tG~~~W~~~~~~~~~~g~~~tagg~vf~gt~dg~l~A~D~~tG~ 505 (599)
T 1w6s_A 452 LGQIKAYNAITGDYKWEKMERFAVWGGTMATAGDLVFYGTLDGYLKARDSDTGD 505 (599)
T ss_dssp CEEEEEECTTTCCEEEEEEESSCCCSBCEEETTTEEEEECTTSEEEEEETTTCC
T ss_pred cCeEEEEECCCCCEEeEecCCCCccCcceEecCCEEEEECCCCeEEEEECCCCC
Confidence 467888999999887666432 2221233456788889999999999999875
No 255
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=97.79 E-value=0.0017 Score=39.54 Aligned_cols=106 Identities=5% Similarity=0.000 Sum_probs=65.4
Q ss_pred eeEEEcCCCCEEEEEcC-CC----cEEEEEcCCCCCc--EEEeeccCCeeEEEEcc-CCCEEEEeeCCCcEEEeeCCCCC
Q 045566 2 LCSTWKDDGTTVFSGGC-DK----QVKMWPLLSGGQP--VTVAMHDAPIKEVAWIP-EMNLLATGSWDKTLKYWDTRQPN 73 (112)
Q Consensus 2 ~~~~~~~~~~~l~~~~~-~~----~v~~~~~~~~~~~--~~~~~~~~~v~~~~~~~-~~~~~~~~~~~~~i~~w~~~~~~ 73 (112)
..++|+++++.|+++.. ++ .+...+. .+... ..+. .......++++| ++.++++-..++.|..++.....
T Consensus 182 ~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~-~g~~~~~~~l~-~~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~ 259 (430)
T 3tc9_A 182 RTICWTHEADSMIITNDQNNNDRPNNYILTR-ESGFKVITELT-KGQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQE 259 (430)
T ss_dssp EEEEECTTSSEEEEEECCSCTTSEEEEEEEG-GGTSCSEEEEE-ECSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTE
T ss_pred ceEEEeCCCCEEEEEeCCCCcccceEEEEeC-CCceeeeeeec-cCCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCc
Confidence 36889999986655543 22 2333442 23222 2332 233457788999 77777777778889999987654
Q ss_pred ceEEecC----CCeEEEEeeCCCEEEEE-eCCCcEEEEECc
Q 045566 74 PVHTQQL----PDRCYALTVRYPLMVVG-TADRNLVVFNLQ 109 (112)
Q Consensus 74 ~~~~~~~----~~~~~~~~~~~~~~~~~-~~d~~v~~~d~~ 109 (112)
....... ....+++++++++++.+ ..++.|..++..
T Consensus 260 ~~~~~~~~~~~~P~gia~~pdG~~lyv~d~~~~~I~~~~~d 300 (430)
T 3tc9_A 260 TTPLFTIQDSGWEFHIQFHPSGNYAYIVVVNQHYILRSDYD 300 (430)
T ss_dssp EEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEE
T ss_pred EEEEEEcCCCCcceeEEEcCCCCEEEEEECCCCEEEEEeCC
Confidence 3222211 24578999999965555 456778887654
No 256
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=97.76 E-value=0.0013 Score=37.19 Aligned_cols=99 Identities=5% Similarity=-0.066 Sum_probs=63.7
Q ss_pred CCEE-EEEcCCCcEEEEEcCCCCCcEEEeeccCCeeEEEEccCCCEEEEeeCCCcEEEeeCCCCCceEEecCCC------
Q 045566 10 GTTV-FSGGCDKQVKMWPLLSGGQPVTVAMHDAPIKEVAWIPEMNLLATGSWDKTLKYWDTRQPNPVHTQQLPD------ 82 (112)
Q Consensus 10 ~~~l-~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~------ 82 (112)
+..+ ...-.++.+.++|..+.+.+.+++....+ .. +.+++..++.+..++.|.++|..+.+.+..+....
T Consensus 74 ~~~ly~ltw~~~~v~v~D~~tl~~~~ti~~~~~G-wg--lt~dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V~~~g~~~~ 150 (243)
T 3mbr_X 74 RDRLIQLTWRNHEGFVYDLATLTPRARFRYPGEG-WA--LTSDDSHLYMSDGTAVIRKLDPDTLQQVGSIKVTAGGRPLD 150 (243)
T ss_dssp TTEEEEEESSSSEEEEEETTTTEEEEEEECSSCC-CE--EEECSSCEEEECSSSEEEEECTTTCCEEEEEECEETTEECC
T ss_pred CCEEEEEEeeCCEEEEEECCcCcEEEEEeCCCCc-eE--EeeCCCEEEEECCCCeEEEEeCCCCeEEEEEEEccCCcccc
Confidence 3444 33456788999999988888887644333 23 33556666666678899999999988776664421
Q ss_pred --eEEEEeeCCCEEEEEeCCCcEEEEECcCCC
Q 045566 83 --RCYALTVRYPLMVVGTADRNLVVFNLQNPQ 112 (112)
Q Consensus 83 --~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~ 112 (112)
+.+.+. ++..++..-.+..|.+.|.++++
T Consensus 151 ~lNeLe~~-~G~lyanvw~s~~I~vIDp~tG~ 181 (243)
T 3mbr_X 151 NLNELEWV-NGELLANVWLTSRIARIDPASGK 181 (243)
T ss_dssp CEEEEEEE-TTEEEEEETTTTEEEEECTTTCB
T ss_pred cceeeEEe-CCEEEEEECCCCeEEEEECCCCC
Confidence 122222 45444444356678888888764
No 257
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=97.71 E-value=0.0016 Score=37.06 Aligned_cols=106 Identities=8% Similarity=0.087 Sum_probs=71.1
Q ss_pred eeEEEcCCCCEE-EEEcCCCcEEEEEcCCCCCcEEEee-ccCCeeEEEEccCCCEEEEeeCCCcEEEeeCCCCCc---eE
Q 045566 2 LCSTWKDDGTTV-FSGGCDKQVKMWPLLSGGQPVTVAM-HDAPIKEVAWIPEMNLLATGSWDKTLKYWDTRQPNP---VH 76 (112)
Q Consensus 2 ~~~~~~~~~~~l-~~~~~~~~v~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~---~~ 76 (112)
..++|+|++..| ++...++.|...|.. ++....++- .......+++.+++.++++.-.++.+.++++..... +.
T Consensus 30 SGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i~l~g~~D~EGIa~~~~g~~~vs~E~~~~l~~~~v~~~~~i~~~~ 108 (255)
T 3qqz_A 30 SSLTWSAQSNTLFSTINKPAAIVEMTTN-GDLIRTIPLDFVKDLETIEYIGDNQFVISDERDYAIYVISLTPNSEVKILK 108 (255)
T ss_dssp EEEEEETTTTEEEEEEETTEEEEEEETT-CCEEEEEECSSCSSEEEEEECSTTEEEEEETTTTEEEEEEECTTCCEEEEE
T ss_pred ceeEEeCCCCEEEEEECCCCeEEEEeCC-CCEEEEEecCCCCChHHeEEeCCCEEEEEECCCCcEEEEEcCCCCeeeeee
Confidence 568999976655 456677888888876 666665532 224667888988887777766677888888765442 12
Q ss_pred EecC---------CCeEEEEeeCCCEEEEEeCCCcEEEEEC
Q 045566 77 TQQL---------PDRCYALTVRYPLMVVGTADRNLVVFNL 108 (112)
Q Consensus 77 ~~~~---------~~~~~~~~~~~~~~~~~~~d~~v~~~d~ 108 (112)
.... ....+++++.+..++++.......+|.+
T Consensus 109 ~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~ 149 (255)
T 3qqz_A 109 KIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKV 149 (255)
T ss_dssp EEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEE
T ss_pred eeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEE
Confidence 2211 1268999999887777776555555544
No 258
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=97.68 E-value=0.0017 Score=36.59 Aligned_cols=108 Identities=6% Similarity=-0.059 Sum_probs=67.0
Q ss_pred eeEEEcCCCCEE-EEEcCCCcEEEEEcCCCCCcEEEeeccCCeeEEEEccCC-CEEEEeeCCCcEEEeeCCCCCceEEec
Q 045566 2 LCSTWKDDGTTV-FSGGCDKQVKMWPLLSGGQPVTVAMHDAPIKEVAWIPEM-NLLATGSWDKTLKYWDTRQPNPVHTQQ 79 (112)
Q Consensus 2 ~~~~~~~~~~~l-~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~~~~~~~~~~i~~w~~~~~~~~~~~~ 79 (112)
..++|++++..| ++-..++.|..++...................+++++++ ..+++-...+.|.++++..........
T Consensus 39 ~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~ 118 (267)
T 1npe_A 39 IGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTTIIRQDLGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQRRVLFD 118 (267)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEECTTCCCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEC
T ss_pred EEEEEecCCCEEEEEECCCCEEEEEecCCCCcEEEEECCCCCccEEEEEecCCeEEEEECCCCEEEEEEcCCCCEEEEEE
Confidence 367889865554 455567889999986554332332222467899999864 455555567889999886543222222
Q ss_pred ---CCCeEEEEeeCCCEEEEEeC---CCcEEEEECc
Q 045566 80 ---LPDRCYALTVRYPLMVVGTA---DRNLVVFNLQ 109 (112)
Q Consensus 80 ---~~~~~~~~~~~~~~~~~~~~---d~~v~~~d~~ 109 (112)
.....+++++++..++.+.. .+.|..+++.
T Consensus 119 ~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~d 154 (267)
T 1npe_A 119 TGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMD 154 (267)
T ss_dssp SSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETT
T ss_pred CCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecC
Confidence 12356788886666655554 3567777654
No 259
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=97.65 E-value=0.003 Score=38.49 Aligned_cols=108 Identities=6% Similarity=0.022 Sum_probs=63.1
Q ss_pred eeEEEcC-CCCEEEEEcCCCcEEEEEcCCCCCcEEEeeccCCeeEEEEccCCCEEEEeeC-CC----cEEEeeCCCCCc-
Q 045566 2 LCSTWKD-DGTTVFSGGCDKQVKMWPLLSGGQPVTVAMHDAPIKEVAWIPEMNLLATGSW-DK----TLKYWDTRQPNP- 74 (112)
Q Consensus 2 ~~~~~~~-~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~-~~----~i~~w~~~~~~~- 74 (112)
..++++| ++..|+++...+.|+.+|+.... +..+.........+++++++..++.+.. ++ .+...+......
T Consensus 140 ~~lavdp~~~g~Lyv~d~~~~I~~id~~~~~-v~~~~~~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~~g~~~~ 218 (430)
T 3tc9_A 140 VWLSFDPKNHNHLYLVGEQHPTRLIDFEKEY-VSTVYSGLSKVRTICWTHEADSMIITNDQNNNDRPNNYILTRESGFKV 218 (430)
T ss_dssp CEEEEETTEEEEEEEEEBTEEEEEEETTTTE-EEEEECCCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEGGGTSCS
T ss_pred CEEEECCCCCCeEEEEeCCCcEEEEECCCCE-EEEEecCCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeCCCceee
Confidence 4678888 45556666555788888876543 3333334455788999999985554443 22 233334322111
Q ss_pred eEEe--cCCCeEEEEee-CCCEEEEEeCCCcEEEEECcC
Q 045566 75 VHTQ--QLPDRCYALTV-RYPLMVVGTADRNLVVFNLQN 110 (112)
Q Consensus 75 ~~~~--~~~~~~~~~~~-~~~~~~~~~~d~~v~~~d~~~ 110 (112)
...+ ......++++| ++.++++-..++.|..+|...
T Consensus 219 ~~~l~~~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~ 257 (430)
T 3tc9_A 219 ITELTKGQNCNGAETHPINGELYFNSWNAGQVFRYDFTT 257 (430)
T ss_dssp EEEEEECSSCCCEEECTTTCCEEEEETTTTEEEEEETTT
T ss_pred eeeeccCCCceEEEEeCCCCEEEEEECCCCEEEEEECCC
Confidence 1111 22345677888 566555555677888888754
No 260
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=97.56 E-value=0.0032 Score=36.35 Aligned_cols=107 Identities=11% Similarity=0.060 Sum_probs=63.2
Q ss_pred eeEEEcCCCCEEEEEcCCCcEEEEEcCCCCCcEEEeeccCCeeEEEEccCCCEEEEeeCCC--cEEEeeCCCCCceEEec
Q 045566 2 LCSTWKDDGTTVFSGGCDKQVKMWPLLSGGQPVTVAMHDAPIKEVAWIPEMNLLATGSWDK--TLKYWDTRQPNPVHTQQ 79 (112)
Q Consensus 2 ~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~--~i~~w~~~~~~~~~~~~ 79 (112)
..++|+++++.+++-..++.|..+|... +..... ........+++.++++++++..... .+..++..+++......
T Consensus 35 egia~~~~g~lyv~d~~~~~I~~~d~~g-~~~~~~-~~~~~p~gia~~~dG~l~vad~~~~~~~v~~~d~~~g~~~~~~~ 112 (306)
T 2p4o_A 35 ENLASAPDGTIFVTNHEVGEIVSITPDG-NQQIHA-TVEGKVSGLAFTSNGDLVATGWNADSIPVVSLVKSDGTVETLLT 112 (306)
T ss_dssp EEEEECTTSCEEEEETTTTEEEEECTTC-CEEEEE-ECSSEEEEEEECTTSCEEEEEECTTSCEEEEEECTTSCEEEEEE
T ss_pred ceEEECCCCCEEEEeCCCCeEEEECCCC-ceEEEE-eCCCCceeEEEcCCCcEEEEeccCCcceEEEEcCCCCeEEEEEe
Confidence 3678999998777777788999998654 322222 2335678899999998766654332 46666766655432221
Q ss_pred CCC----eEEEEeeCCCEEEEEeCCCcEEEEECcC
Q 045566 80 LPD----RCYALTVRYPLMVVGTADRNLVVFNLQN 110 (112)
Q Consensus 80 ~~~----~~~~~~~~~~~~~~~~~d~~v~~~d~~~ 110 (112)
... ...+..+.+..+++-..++.|..+|...
T Consensus 113 ~~~~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~ 147 (306)
T 2p4o_A 113 LPDAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQ 147 (306)
T ss_dssp CTTCSCEEEEEESSSSEEEEEETTTTEEEEEETTT
T ss_pred CCCccccCcccccCCCcEEEEECCCCeEEEEeCCC
Confidence 111 2223323333333333577888888653
No 261
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=97.54 E-value=0.0028 Score=36.48 Aligned_cols=95 Identities=9% Similarity=0.025 Sum_probs=60.2
Q ss_pred CCEEEEEcCCCcEEEEEcCCCCCcEEEeeccCCeeEEEEccCCCEEEEeeCCCcEEEeeCCCCCceEEecCC---CeEEE
Q 045566 10 GTTVFSGGCDKQVKMWPLLSGGQPVTVAMHDAPIKEVAWIPEMNLLATGSWDKTLKYWDTRQPNPVHTQQLP---DRCYA 86 (112)
Q Consensus 10 ~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~---~~~~~ 86 (112)
+..+..++.++.+..+|.. ++...........+.++...+++.. ..++.++.+..+|.. ++.+...... ...+.
T Consensus 107 ~~~l~v~t~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~~g~l-~vgt~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~ 183 (330)
T 3hxj_A 107 EDILYVTSMDGHLYAINTD-GTEKWRFKTKKAIYATPIVSEDGTI-YVGSNDNYLYAINPD-GTEKWRFKTNDAITSAAS 183 (330)
T ss_dssp TTEEEEECTTSEEEEECTT-SCEEEEEECSSCCCSCCEECTTSCE-EEECTTSEEEEECTT-SCEEEEEECSSCCCSCCE
T ss_pred CCEEEEEecCCEEEEEcCC-CCEEEEEcCCCceeeeeEEcCCCEE-EEEcCCCEEEEECCC-CCEeEEEecCCCceeeeE
Confidence 4456778878889999977 6655555444445566666667764 456677889999988 6655444322 23444
Q ss_pred EeeCCCEEEEEeCCCcEEEEECcCC
Q 045566 87 LTVRYPLMVVGTADRNLVVFNLQNP 111 (112)
Q Consensus 87 ~~~~~~~~~~~~~d~~v~~~d~~~~ 111 (112)
...++. ++.++ +.+..+| .++
T Consensus 184 ~d~~g~-l~v~t--~~l~~~d-~~g 204 (330)
T 3hxj_A 184 IGKDGT-IYFGS--DKVYAIN-PDG 204 (330)
T ss_dssp ECTTCC-EEEES--SSEEEEC-TTS
T ss_pred EcCCCE-EEEEe--CEEEEEC-CCC
Confidence 445555 44554 7788887 443
No 262
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=97.48 E-value=0.0025 Score=40.23 Aligned_cols=77 Identities=13% Similarity=0.076 Sum_probs=50.3
Q ss_pred CCcEEEEEcCCCCCcEEEeeccCCeeEEEEccCCCEEEEeeCCCcEEEeeCCCCCceEEecCCC----eEEEEeeCCCEE
Q 045566 19 DKQVKMWPLLSGGQPVTVAMHDAPIKEVAWIPEMNLLATGSWDKTLKYWDTRQPNPVHTQQLPD----RCYALTVRYPLM 94 (112)
Q Consensus 19 ~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~----~~~~~~~~~~~~ 94 (112)
++.+..+|..+++...++... ..+....+...+..++.++.++.++.+|.++++.+..+.... ..+.+..++..+
T Consensus 443 ~g~l~a~D~~tG~~~W~~~~~-~~~~~~~~~t~gg~v~~g~~dg~l~a~D~~tG~~lw~~~~~~~~~~~p~~~~~~G~~y 521 (571)
T 2ad6_A 443 MGQIRAFDLTTGKAKWTKWEK-FAAWGGTLYTKGGLVWYATLDGYLKALDNKDGKELWNFKMPSGGIGSPMTYSFKGKQY 521 (571)
T ss_dssp CEEEEEECTTTCCEEEEEEES-SCCCSBCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEE
T ss_pred CCeEEEEECCCCCEEEEecCC-CCccceeEEECCCEEEEEcCCCeEEEEECCCCCEEEEEeCCCCcEeeeEEEEECCEEE
Confidence 467889998888877766532 222222222235566778899999999999999888776432 234455666644
Q ss_pred EE
Q 045566 95 VV 96 (112)
Q Consensus 95 ~~ 96 (112)
+.
T Consensus 522 v~ 523 (571)
T 2ad6_A 522 IG 523 (571)
T ss_dssp EE
T ss_pred EE
Confidence 43
No 263
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=97.48 E-value=0.0042 Score=36.01 Aligned_cols=106 Identities=9% Similarity=0.018 Sum_probs=64.2
Q ss_pred eEEEcC-CCCEEEEEcCCCcEEEEEcCCCCCcEEEee-----ccCCeeEEEEcc-CCCEEEEeeC---------------
Q 045566 3 CSTWKD-DGTTVFSGGCDKQVKMWPLLSGGQPVTVAM-----HDAPIKEVAWIP-EMNLLATGSW--------------- 60 (112)
Q Consensus 3 ~~~~~~-~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~-----~~~~v~~~~~~~-~~~~~~~~~~--------------- 60 (112)
.+++++ ++++ +++...+.+..+|..++.. ..+.. .......+++.+ ++..+++-..
T Consensus 84 gi~~~~~~g~l-~v~d~~~~i~~~d~~~g~~-~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~ 161 (322)
T 2fp8_A 84 DISYNLQNNQL-YIVDCYYHLSVVGSEGGHA-TQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTS 161 (322)
T ss_dssp EEEEETTTTEE-EEEETTTEEEEECTTCEEC-EEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHT
T ss_pred eEEEcCCCCcE-EEEECCCCEEEEeCCCCEE-EEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehccc
Confidence 577887 5554 4443344577787654322 22211 123467899999 8987776432
Q ss_pred --CCcEEEeeCCCCCceEE--ecCCCeEEEEeeCCCEEEEE-eCCCcEEEEECcC
Q 045566 61 --DKTLKYWDTRQPNPVHT--QQLPDRCYALTVRYPLMVVG-TADRNLVVFNLQN 110 (112)
Q Consensus 61 --~~~i~~w~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~-~~d~~v~~~d~~~ 110 (112)
++.+..+|..+.+.... -......+++++++..++++ ..++.|..+++..
T Consensus 162 ~~~g~v~~~d~~~~~~~~~~~~~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~ 216 (322)
T 2fp8_A 162 DKTGRLIKYDPSTKETTLLLKELHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEG 216 (322)
T ss_dssp CCCEEEEEEETTTTEEEEEEEEESCCCEEEECTTSSEEEEEEGGGTEEEEEESSS
T ss_pred CCCceEEEEeCCCCEEEEeccCCccCcceEECCCCCEEEEEeCCCCeEEEEECCC
Confidence 35678888765543211 11234568899999876665 4567899998764
No 264
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=97.41 E-value=0.0095 Score=38.36 Aligned_cols=94 Identities=14% Similarity=0.131 Sum_probs=64.2
Q ss_pred CCcEEEEEcCCCCCcEEEeec---cC----------------------------CeeEEEEccCCCEEEEeeCCC-----
Q 045566 19 DKQVKMWPLLSGGQPVTVAMH---DA----------------------------PIKEVAWIPEMNLLATGSWDK----- 62 (112)
Q Consensus 19 ~~~v~~~~~~~~~~~~~~~~~---~~----------------------------~v~~~~~~~~~~~~~~~~~~~----- 62 (112)
++.|..+|..+++.+..+... .. ....+++.++...++.+..++
T Consensus 177 ~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~~w~~~~gg~~w~~~a~d~~~~~vy~~~~~g~~w~~ 256 (668)
T 1kv9_A 177 RGFVSAYDADTGKLAWRFYTVPGDPALPYEHPELREAAKTWQGDQYWKLGGGGTVWDSMAYDPELDLLYVGTGNGSPWNR 256 (668)
T ss_dssp BCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTCCSSCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCH
T ss_pred CCEEEEEECCCCcEEEEecccCCCCCccccccccccccccCCccceeeeCCCCccccceEEcCCCCEEEEeCCCCCcccc
Confidence 588999999999887766421 00 112367777777777776655
Q ss_pred --------------cEEEeeCCCCCceEEecCC----------Ce--EEEEeeCCC---EEEEEeCCCcEEEEECcCCC
Q 045566 63 --------------TLKYWDTRQPNPVHTQQLP----------DR--CYALTVRYP---LMVVGTADRNLVVFNLQNPQ 112 (112)
Q Consensus 63 --------------~i~~w~~~~~~~~~~~~~~----------~~--~~~~~~~~~---~~~~~~~d~~v~~~d~~~~~ 112 (112)
.|..+|.++++.+..+... .. ...+..++. .++.++.+|.++++|.++++
T Consensus 257 ~~~~~~~gd~l~~~~v~AlD~~tG~~~W~~~~~~~~~wd~~~~~~~~~~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~ 335 (668)
T 1kv9_A 257 EVRSPGGGDNLYLSSILAIRPDTGKLAWHYQVTPGDSWDFTATQQITLAELNIDGKPRKVLMQAPKNGFFYVLDRTNGK 335 (668)
T ss_dssp HHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCC
T ss_pred CCCCCCCCCceeeeeEEEEcCCCCceeeEeecCCCccccccCCCCcEEEEeccCCcEEEEEEEECCCCEEEEEECCCCC
Confidence 3889999999988766432 11 112234554 68888999999999998875
No 265
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=97.38 E-value=0.006 Score=35.38 Aligned_cols=106 Identities=10% Similarity=-0.045 Sum_probs=63.8
Q ss_pred eeEEEcCCCCEEEEE-cCCCcEEEEEcCCCC--CcEEEeeccCCeeEEEEccCCCEEEEeeC----------CCcEEEee
Q 045566 2 LCSTWKDDGTTVFSG-GCDKQVKMWPLLSGG--QPVTVAMHDAPIKEVAWIPEMNLLATGSW----------DKTLKYWD 68 (112)
Q Consensus 2 ~~~~~~~~~~~l~~~-~~~~~v~~~~~~~~~--~~~~~~~~~~~v~~~~~~~~~~~~~~~~~----------~~~i~~w~ 68 (112)
..++++|+++.++.+ ..++.|..+++.... ....+..... ...+++.++|.++++... .+.|..+|
T Consensus 188 ~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~~~~g-P~gi~~d~~G~l~va~~~~~~~~~~~~~~~~v~~~d 266 (322)
T 2fp8_A 188 GGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLVKIPN-PGNIKRNADGHFWVSSSEELDGNMHGRVDPKGIKFD 266 (322)
T ss_dssp CEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTCEEEEEECSS-EEEEEECTTSCEEEEEEEETTSSTTSCEEEEEEEEC
T ss_pred cceEECCCCCEEEEEeCCCCeEEEEECCCCcCCccceEEeCCC-CCCeEECCCCCEEEEecCcccccccCCCccEEEEEC
Confidence 357899999866555 566889999986432 1122222223 677899999987776644 35677777
Q ss_pred CCCCCceEEecCC-------CeEEEEeeCCCEEEEEeCCCcEEEEECcC
Q 045566 69 TRQPNPVHTQQLP-------DRCYALTVRYPLMVVGTADRNLVVFNLQN 110 (112)
Q Consensus 69 ~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~d~~v~~~d~~~ 110 (112)
.. ++.+..+..+ ...+.+ .++.++++...++.|..+++..
T Consensus 267 ~~-G~~~~~~~~~~g~~~~~~~~~~~-~~g~L~v~~~~~~~i~~~~~~~ 313 (322)
T 2fp8_A 267 EF-GNILEVIPLPPPFAGEHFEQIQE-HDGLLYIGTLFHGSVGILVYDK 313 (322)
T ss_dssp TT-SCEEEEEECCTTTTTSCCCEEEE-ETTEEEEECSSCSEEEEEEC--
T ss_pred CC-CCEEEEEECCCCCccccceEEEE-eCCEEEEeecCCCceEEEeccc
Confidence 64 4444444322 233333 3554444445677898888753
No 266
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=97.34 E-value=0.0031 Score=39.94 Aligned_cols=77 Identities=16% Similarity=0.043 Sum_probs=51.6
Q ss_pred CCcEEEEEcCCCCCcEEEeeccCCeeEEEEccCCCEEEEeeCCCcEEEeeCCCCCceEEecCCC----eEEEEeeCCCEE
Q 045566 19 DKQVKMWPLLSGGQPVTVAMHDAPIKEVAWIPEMNLLATGSWDKTLKYWDTRQPNPVHTQQLPD----RCYALTVRYPLM 94 (112)
Q Consensus 19 ~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~----~~~~~~~~~~~~ 94 (112)
++.+..||+.+++...+.+... +...-.....+.+++.++.|+.++.+|.++++.+..+..+. ..+.+..++++.
T Consensus 465 ~G~l~A~D~~tG~~~W~~~~~~-~~~~g~~~tagglvf~g~~dg~l~A~D~~tG~~lW~~~~~~g~~a~P~~y~~~G~qY 543 (582)
T 1flg_A 465 VGSLRAMDPVSGKVVWEHKEHL-PLWAGVLATAGNLVFTGTGDGYFKAFDAKSGKELWKFQTGSGIVSPPITWEQDGEQY 543 (582)
T ss_dssp SEEEEEECTTTCCEEEEEEESS-CCCSCCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEE
T ss_pred cceEEEEECCCCCEEEEecCCC-CCcccceEeCCCEEEEECCCCcEEEEECCCCCEEEEecCCCCcccCceEEEECCEEE
Confidence 5778889998888776655322 22111112235677779999999999999999998776543 346666777644
Q ss_pred EE
Q 045566 95 VV 96 (112)
Q Consensus 95 ~~ 96 (112)
++
T Consensus 544 v~ 545 (582)
T 1flg_A 544 LG 545 (582)
T ss_dssp EE
T ss_pred EE
Confidence 33
No 267
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=97.25 E-value=0.012 Score=35.98 Aligned_cols=107 Identities=8% Similarity=0.041 Sum_probs=61.4
Q ss_pred eeEEEcCCCCEEEEEcCC---Cc-EEEEEcCCCCC-cEEEeeccCCeeEEEEcc-CCCEEEEeeCCCcEEEeeCCCCCce
Q 045566 2 LCSTWKDDGTTVFSGGCD---KQ-VKMWPLLSGGQ-PVTVAMHDAPIKEVAWIP-EMNLLATGSWDKTLKYWDTRQPNPV 75 (112)
Q Consensus 2 ~~~~~~~~~~~l~~~~~~---~~-v~~~~~~~~~~-~~~~~~~~~~v~~~~~~~-~~~~~~~~~~~~~i~~w~~~~~~~~ 75 (112)
..++++++++++++...+ .. +...+...... ...+. .......++++| ++.++++-..++.|+.++..++...
T Consensus 185 ~giavd~dG~lyVad~~~~~~~~gv~~~~~~~~~~~~~~~~-~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~ 263 (433)
T 4hw6_A 185 ADVNFTLNGDMVVVDDQSSDTNTGIYLFTRASGFTERLSLC-NARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLT 263 (433)
T ss_dssp EEEEECTTCCEEEEECCSCTTSEEEEEECGGGTTCCEEEEE-ECSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEE
T ss_pred cEEEECCCCCEEEEcCCCCcccceEEEEECCCCeecccccc-ccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEE
Confidence 468899988844443321 11 22232221111 11222 233446788999 7777777667888999998766542
Q ss_pred EEe-c--C--CCeEEEEeeCCCEEEEEe-CCCcEEEEECc
Q 045566 76 HTQ-Q--L--PDRCYALTVRYPLMVVGT-ADRNLVVFNLQ 109 (112)
Q Consensus 76 ~~~-~--~--~~~~~~~~~~~~~~~~~~-~d~~v~~~d~~ 109 (112)
..+ . . ....++++++++.|+.+. ..+.|..+++.
T Consensus 264 ~~~~~~~~~~~~~~ia~dpdG~~LYvad~~~~~I~~~~~d 303 (433)
T 4hw6_A 264 EEEVMMDTKGSNFHIVWHPTGDWAYIIYNGKHCIYRVDYN 303 (433)
T ss_dssp EEEEECSCCSSCEEEEECTTSSEEEEEETTTTEEEEEEBC
T ss_pred EEEeccCCCCCcccEEEeCCCCEEEEEeCCCCEEEEEeCC
Confidence 211 1 1 123589999998665554 46778887754
No 268
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=97.22 E-value=0.0019 Score=36.12 Aligned_cols=97 Identities=8% Similarity=-0.103 Sum_probs=59.2
Q ss_pred CeeEEEcCCCCEEEEEcCCCcEEEEEcCCCCCc-----EEEee--ccCCeeEEEEccCCCEEEEeeCCCcEEEeeCCCCC
Q 045566 1 VLCSTWKDDGTTVFSGGCDKQVKMWPLLSGGQP-----VTVAM--HDAPIKEVAWIPEMNLLATGSWDKTLKYWDTRQPN 73 (112)
Q Consensus 1 v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~-----~~~~~--~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~ 73 (112)
+..++|+|+|.+.++ .++.+.-.+..+.... .+..+ --....++.|.|++.+.++ .|+.|+-++..+..
T Consensus 43 ~~~laf~P~G~LYaV--~~G~Ly~~~~~t~~~~~W~~s~t~IG~~Gw~~F~a~~fD~~G~LYav--~dG~iyr~~pP~~~ 118 (236)
T 1tl2_A 43 FKFLFLSPGGELYGV--LNDKIYKGTPPTHDNDNWMGRAKKIGNGGWNQFQFLFFDPNGYLYAV--SKDKLYKASPPQSD 118 (236)
T ss_dssp CSEEEECTTSCEEEE--ETTEEEEESCCCSTTCCHHHHCEEEECSCGGGCSEEEECTTSCEEEE--ETTEEEEESCCCST
T ss_pred ceeEEECCCccEEEE--eCCeEEEECCCCCCcccccccccEecccccccceEEEECCCCCEEEe--CCCEEEEeCCCcCC
Confidence 357999999987776 6677666665432211 11111 1112578899999998877 55888878764432
Q ss_pred ce-------EEec---CCCeEEEEeeCCCEEEEEeCCCcE
Q 045566 74 PV-------HTQQ---LPDRCYALTVRYPLMVVGTADRNL 103 (112)
Q Consensus 74 ~~-------~~~~---~~~~~~~~~~~~~~~~~~~~d~~v 103 (112)
.- .... .....+.+.|+|.+.++. |+.+
T Consensus 119 ~~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~--dg~l 156 (236)
T 1tl2_A 119 TDNWIARATEVGSGGWSGFKFLFFHPNGYLYAVH--GQQF 156 (236)
T ss_dssp TCCHHHHSEEEECSSGGGEEEEEECTTSCEEEEE--TTEE
T ss_pred CCceeccccEeccCCCCceEEEEECCCceEEEEe--CCcE
Confidence 11 1111 133678888999876666 6664
No 269
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=97.04 E-value=0.018 Score=36.81 Aligned_cols=103 Identities=10% Similarity=0.123 Sum_probs=64.9
Q ss_pred CCEEEEEcC-CCcEEEEEc-CCCCCcEEEeeccCC-----------eeEEEEccCCCE----EEEeeCCCcEEEeeCCCC
Q 045566 10 GTTVFSGGC-DKQVKMWPL-LSGGQPVTVAMHDAP-----------IKEVAWIPEMNL----LATGSWDKTLKYWDTRQP 72 (112)
Q Consensus 10 ~~~l~~~~~-~~~v~~~~~-~~~~~~~~~~~~~~~-----------v~~~~~~~~~~~----~~~~~~~~~i~~w~~~~~ 72 (112)
+..+++++. ++.|.-+|. .+++.+.++...... ...+++.|.+.. ++.++.++.+..+|.+++
T Consensus 62 ~g~vyv~~~~~~~v~AlD~~~tG~~lW~~~~~~~~~~~~~~~~~~~~~g~av~p~~g~~~~rV~v~t~dg~l~AlDa~TG 141 (599)
T 1w6s_A 62 DGKMYIHTSFPNNTFALGLDDPGTILWQDKPKQNPAARAVACCDLVNRGLAYWPGDGKTPALILKTQLDGNVAALNAETG 141 (599)
T ss_dssp TTEEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCSSCSCCCCCEEECCCSSSCCEEEEECTTSEEEEEETTTC
T ss_pred CCEEEEEeCCCCEEEEEeCCCCCcEEEEECCCCCccccccccccccccceEEEecCCcceeEEEEEcCCCEEEEEECCCC
Confidence 446677777 789999999 888887766432110 123445332333 677778999999999999
Q ss_pred CceEEecCCCe----EEEEee--CCCEEEEEe------CCCcEEEEECcCCC
Q 045566 73 NPVHTQQLPDR----CYALTV--RYPLMVVGT------ADRNLVVFNLQNPQ 112 (112)
Q Consensus 73 ~~~~~~~~~~~----~~~~~~--~~~~~~~~~------~d~~v~~~d~~~~~ 112 (112)
+.+........ .+.-.| .+..+++++ .++.|+.+|.++++
T Consensus 142 ~~~W~~~~~~~~~~~~~~ssP~v~~g~V~vg~~g~e~g~~g~v~A~D~~TG~ 193 (599)
T 1w6s_A 142 ETVWKVENSDIKVGSTLTIAPYVVKDKVIIGSSGAELGVRGYLTAYDVKTGE 193 (599)
T ss_dssp CEEEEEECCCGGGTCBCCSCCEEETTEEEECCBCGGGTCCCEEEEEETTTCC
T ss_pred CEEEeecCCCCCccceeecCCEEECCEEEEEecccccCCCCeEEEEECCCCc
Confidence 98866543210 000011 134566655 37899999998875
No 270
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=96.92 E-value=0.019 Score=32.67 Aligned_cols=105 Identities=8% Similarity=0.046 Sum_probs=65.6
Q ss_pred eeEEEcCCCCEEEEEcCCCcEEEEEcCC---CCCcEEEe-------eccCCeeEEEEcc-CCCEEEEeeCCCcEEEeeCC
Q 045566 2 LCSTWKDDGTTVFSGGCDKQVKMWPLLS---GGQPVTVA-------MHDAPIKEVAWIP-EMNLLATGSWDKTLKYWDTR 70 (112)
Q Consensus 2 ~~~~~~~~~~~l~~~~~~~~v~~~~~~~---~~~~~~~~-------~~~~~v~~~~~~~-~~~~~~~~~~~~~i~~w~~~ 70 (112)
..++|+|.++.|+++.+.....+|.... ...+.... .+...+..++++| .+.+++....++.+..+|..
T Consensus 124 EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~~~~l~i~~~~~~~~~~~~~d~S~l~~dp~tg~lliLS~~s~~L~~~d~~ 203 (255)
T 3qqz_A 124 EGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDKALQRQFTLDDVSGAEFNQQKNTLLVLSHESRALQEVTLV 203 (255)
T ss_dssp EEEEEETTTTEEEEEEESSSEEEEEEESTTCSSCCEEEECHHHHHTCCSSCCCEEEEETTTTEEEEEETTTTEEEEECTT
T ss_pred ceEEEeCCCCEEEEEECcCCceEEEEcccccCCceeeecchhhccccccCCceeEEEcCCCCeEEEEECCCCeEEEEcCC
Confidence 4689999888777777655555555431 11122221 1233568999999 56667777778889999976
Q ss_pred CCCceEEecC------------CCeEEEEeeCCCEEEEEeCCCcEEEEEC
Q 045566 71 QPNPVHTQQL------------PDRCYALTVRYPLMVVGTADRNLVVFNL 108 (112)
Q Consensus 71 ~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~d~~v~~~d~ 108 (112)
.. .+..+.. ....++|.++|+.+++ +.-..++.+.-
T Consensus 204 g~-~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~lyIv-sE~n~~y~f~~ 251 (255)
T 3qqz_A 204 GE-VIGEMSLTKGSRGLSHNIKQAEGVAMDASGNIYIV-SEPNRFYRFTP 251 (255)
T ss_dssp CC-EEEEEECSTTGGGCSSCCCSEEEEEECTTCCEEEE-ETTTEEEEEEC
T ss_pred CC-EEEEEEcCCccCCcccccCCCCeeEECCCCCEEEE-cCCceEEEEEe
Confidence 43 4433321 2267999999985554 55556666643
No 271
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=96.91 E-value=0.039 Score=36.11 Aligned_cols=104 Identities=13% Similarity=0.071 Sum_probs=61.9
Q ss_pred eeEEEcCCCCEEEEEcCCCcEEEEEcCCCCCcEEEe-----eccCCeeEEEEccCCCEEEEeeCCCcEEEeeCCCCCceE
Q 045566 2 LCSTWKDDGTTVFSGGCDKQVKMWPLLSGGQPVTVA-----MHDAPIKEVAWIPEMNLLATGSWDKTLKYWDTRQPNPVH 76 (112)
Q Consensus 2 ~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~~-----~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~ 76 (112)
.+++..++++.|..|+.++-+..++..+++. ..+. .....|.++...+++.+.+... + -+..|+..+.+...
T Consensus 409 ~~i~~d~~g~~lWigt~~~Gl~~~d~~~~~~-~~~~~~~~~l~~~~v~~i~~d~~g~lwigt~-~-Gl~~~~~~~~~~~~ 485 (795)
T 4a2l_A 409 KAVYVDEKKSLVYIGTHAGGLSILHRNSGQV-ENFNQRNSQLVNENVYAILPDGEGNLWLGTL-S-ALVRFNPEQRSFTT 485 (795)
T ss_dssp EEEEEETTTTEEEEEETTTEEEEEETTTCCE-EEECTTTSCCSCSCEEEEEECSSSCEEEEES-S-CEEEEETTTTEEEE
T ss_pred EEEEEcCCCCEEEEEeCcCceeEEeCCCCcE-EEeecCCCCcCCCeeEEEEECCCCCEEEEec-C-ceeEEeCCCCeEEE
Confidence 4566667777566677767788998765543 2222 1235688888888888666554 4 47788876653322
Q ss_pred Eec---------CCCeEEEEeeCCCEEEEEeCCCcEEEEECcC
Q 045566 77 TQQ---------LPDRCYALTVRYPLMVVGTADRNLVVFNLQN 110 (112)
Q Consensus 77 ~~~---------~~~~~~~~~~~~~~~~~~~~d~~v~~~d~~~ 110 (112)
... ..+..+..+.++. +..++. +.+..||..+
T Consensus 486 ~~~~~~~~~~~~~~i~~i~~d~~g~-lWigt~-~Gl~~~~~~~ 526 (795)
T 4a2l_A 486 IEKEKDGTPVVSKQITTLFRDSHKR-LWIGGE-EGLSVFKQEG 526 (795)
T ss_dssp CCBCTTCCBCCCCCEEEEEECTTCC-EEEEES-SCEEEEEEET
T ss_pred ccccccccccCCceEEEEEECCCCC-EEEEeC-CceEEEeCCC
Confidence 111 1123444555565 444555 5688887654
No 272
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=96.82 E-value=0.029 Score=33.29 Aligned_cols=98 Identities=6% Similarity=0.009 Sum_probs=61.7
Q ss_pred eEEEcCCCCEEEEE-cCCCcEEEEEcCCCCCcEE-Eee----c--cCCeeEEEE---ccCCCEEEEee------------
Q 045566 3 CSTWKDDGTTVFSG-GCDKQVKMWPLLSGGQPVT-VAM----H--DAPIKEVAW---IPEMNLLATGS------------ 59 (112)
Q Consensus 3 ~~~~~~~~~~l~~~-~~~~~v~~~~~~~~~~~~~-~~~----~--~~~v~~~~~---~~~~~~~~~~~------------ 59 (112)
+.+|++....+..+ -..+.|..|+...+..... +.. . ......+.+ .|++.+++...
T Consensus 17 ~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~af~~~g~~~ 96 (334)
T 2p9w_A 17 DTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAKSFNFADQSS 96 (334)
T ss_dssp CEEEETTTTEEEEEETTTTEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETTTTCTTSCCS
T ss_pred CccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCCCCcEEEEEccccccccccccc
Confidence 67898855555555 4789999999764433222 111 0 113578999 68887777543
Q ss_pred -CCCcEEEeeCC---CCCceEEecC----------------CCeEEEEeeCCCEEEEEeCC
Q 045566 60 -WDKTLKYWDTR---QPNPVHTQQL----------------PDRCYALTVRYPLMVVGTAD 100 (112)
Q Consensus 60 -~~~~i~~w~~~---~~~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~d 100 (112)
.++.+..+|+. +++.+..... ....++..++|+..++++..
T Consensus 97 ~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~ 157 (334)
T 2p9w_A 97 HGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALG 157 (334)
T ss_dssp SSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEES
T ss_pred CCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCCC
Confidence 25778999998 6665543321 13466777788877766655
No 273
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=96.81 E-value=0.034 Score=34.00 Aligned_cols=109 Identities=4% Similarity=-0.020 Sum_probs=59.6
Q ss_pred eeEEEcCC--CCEEEEEcCCCcEEEEEcCCCCCcEEEeeccCCeeEEEEccCCCEEEEeeCC---Cc-EEEeeCCCCCc-
Q 045566 2 LCSTWKDD--GTTVFSGGCDKQVKMWPLLSGGQPVTVAMHDAPIKEVAWIPEMNLLATGSWD---KT-LKYWDTRQPNP- 74 (112)
Q Consensus 2 ~~~~~~~~--~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~---~~-i~~w~~~~~~~- 74 (112)
..++|+|+ ...|+.+...+.|+.++..++.. ..+.........+++++++.++++.... .. +...+......
T Consensus 142 ~gvavd~~s~~g~Lyv~D~~~~I~~id~~~g~v-~~~~~~~~~P~giavd~dG~lyVad~~~~~~~~gv~~~~~~~~~~~ 220 (433)
T 4hw6_A 142 WRMMFDPNSNYDDLYWVGQRDAFRHVDFVNQYV-DIKTTNIGQCADVNFTLNGDMVVVDDQSSDTNTGIYLFTRASGFTE 220 (433)
T ss_dssp CEEEECTTTTTCEEEEECBTSCEEEEETTTTEE-EEECCCCSCEEEEEECTTCCEEEEECCSCTTSEEEEEECGGGTTCC
T ss_pred ceEEEccccCCCEEEEEeCCCCEEEEECCCCEE-EEeecCCCCccEEEECCCCCEEEEcCCCCcccceEEEEECCCCeec
Confidence 36788884 44455554447899998765443 3333344557899999999855554322 11 22233221111
Q ss_pred --eEEecCCCeEEEEee-CCCEEEEEeCCCcEEEEECcCC
Q 045566 75 --VHTQQLPDRCYALTV-RYPLMVVGTADRNLVVFNLQNP 111 (112)
Q Consensus 75 --~~~~~~~~~~~~~~~-~~~~~~~~~~d~~v~~~d~~~~ 111 (112)
..........+++++ ++.++++-..++.|+.+|..++
T Consensus 221 ~~~~~~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g 260 (433)
T 4hw6_A 221 RLSLCNARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATG 260 (433)
T ss_dssp EEEEEECSSBCCCEECTTTCCEEECBTTCSEEEEECTTTC
T ss_pred cccccccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCC
Confidence 111112224566777 5555445445667777776543
No 274
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=96.71 E-value=0.043 Score=33.82 Aligned_cols=90 Identities=11% Similarity=0.086 Sum_probs=59.3
Q ss_pred CcEEEEEcCCCCCcEEEeec----cCCeeEEEEccCCCEEEEeeCCCcEEEeeCCCCC------------ceEEec----
Q 045566 20 KQVKMWPLLSGGQPVTVAMH----DAPIKEVAWIPEMNLLATGSWDKTLKYWDTRQPN------------PVHTQQ---- 79 (112)
Q Consensus 20 ~~v~~~~~~~~~~~~~~~~~----~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~------------~~~~~~---- 79 (112)
+.||.-++.....-+.+... -..+..+..+|+|.+++..+ ++.|.+-.+..+. ....+.
T Consensus 41 n~iR~~~i~~~~~Yk~L~~~~~i~f~~i~qlvlSpsG~lLAl~g-~~~V~Vv~LP~~~~~~~~~~~~~~~q~~ty~l~~~ 119 (452)
T 3pbp_A 41 NIIRWYNVLTDSLYHSLNFSRHLVLDDTFHVISSTSGDLLCLFN-DNEIFVMEVPWGYSNVEDVSIQDAFQIFHYSIDEE 119 (452)
T ss_dssp TEEEEEETTTCSSCEEEECTTTCCCCTTCEEEECTTSSEEEEEC-SSEEEEEECCTTCSCCCCHHHHHTTEEEEEEGGGC
T ss_pred CEEEEEECCCCCcceEEecCcccccCceeEEEECCCCCEEEEec-CCeEEEEEecCccccCcccccccccceeEEEcCCc
Confidence 45666666544333344322 22578899999999988774 5578887776221 011221
Q ss_pred -----CCCeEEEEeeC---CCEEEEEeCCCcEEEEECcC
Q 045566 80 -----LPDRCYALTVR---YPLMVVGTADRNLVVFNLQN 110 (112)
Q Consensus 80 -----~~~~~~~~~~~---~~~~~~~~~d~~v~~~d~~~ 110 (112)
.++..+.|||- +..+++-..|+.|++||+..
T Consensus 120 ~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~ 158 (452)
T 3pbp_A 120 EVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILN 158 (452)
T ss_dssp C--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTC
T ss_pred ccCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEccc
Confidence 23567888884 56899999999999999875
No 275
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=96.56 E-value=0.047 Score=32.31 Aligned_cols=108 Identities=10% Similarity=-0.079 Sum_probs=64.7
Q ss_pred eeEEEcCCCCEE-EEEcCCCcEEEEEcCCCCCcEEEeeccCCeeEEEEcc-CCCEEEEeeCCCcEEEeeCCCCCceEEec
Q 045566 2 LCSTWKDDGTTV-FSGGCDKQVKMWPLLSGGQPVTVAMHDAPIKEVAWIP-EMNLLATGSWDKTLKYWDTRQPNPVHTQQ 79 (112)
Q Consensus 2 ~~~~~~~~~~~l-~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~~~~~~~~~i~~w~~~~~~~~~~~~ 79 (112)
..++|++.+..| ++-...+.|..+++..................+++.+ .+.++++-...+.|.+.++..........
T Consensus 76 ~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~ 155 (349)
T 3v64_C 76 IALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLW 155 (349)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEC
T ss_pred EEEEEeccccEEEEEeccCCceEEEecCCCCceEEEeCCCCCccEEEEecCCCeEEEEcCCCCeEEEEcCCCCceEEEEe
Confidence 367888755444 4445667888888765443333332233457888987 45555666667889999887554333222
Q ss_pred C---CCeEEEEeeCCCEEEEEeC-C-CcEEEEECc
Q 045566 80 L---PDRCYALTVRYPLMVVGTA-D-RNLVVFNLQ 109 (112)
Q Consensus 80 ~---~~~~~~~~~~~~~~~~~~~-d-~~v~~~d~~ 109 (112)
. ....++++|.+..++.... + +.|...++.
T Consensus 156 ~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~d 190 (349)
T 3v64_C 156 QSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMD 190 (349)
T ss_dssp TTCSCEEEEEEETTTTEEEEEECSSSCEEEEEETT
T ss_pred CCCCCcceEEEecCcCeEEEeccCCCCEEEEEeCC
Confidence 2 2356788886555554443 3 567766654
No 276
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=96.53 E-value=0.0081 Score=35.63 Aligned_cols=103 Identities=11% Similarity=0.090 Sum_probs=63.5
Q ss_pred CCEEEEEcCCCcEEEEEcCCCCCcEEEeecc-CCeeEEEEc--c-CCCEEEEe-eCCCcEEEeeCCCCCceEEecCC---
Q 045566 10 GTTVFSGGCDKQVKMWPLLSGGQPVTVAMHD-APIKEVAWI--P-EMNLLATG-SWDKTLKYWDTRQPNPVHTQQLP--- 81 (112)
Q Consensus 10 ~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~-~~v~~~~~~--~-~~~~~~~~-~~~~~i~~w~~~~~~~~~~~~~~--- 81 (112)
+..++.++.||.|.-.|..+++...++.... .+.....-. + ++..++.. ..||.+..++..++........+
T Consensus 10 ~~~V~v~t~dG~l~Ald~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~~~~~~~lv 89 (339)
T 2be1_A 10 SDILIAADVEGGLHAVDRRNGHIIWSIEPENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQKLPLSIRQLV 89 (339)
T ss_dssp EEEEEEEETTSCEEEEETTTTEEEEEECGGGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEEEEEEHHHHH
T ss_pred CCEEEEEeCCCeEEEEECCCCcEEEEecCCccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEEeeeccccce
Confidence 3478889999999999998888877775431 222221100 1 22333333 57999999998776443333211
Q ss_pred -CeEEEEe-------e----CCCEEEEEeCCCcEEEEECcCCC
Q 045566 82 -DRCYALT-------V----RYPLMVVGTADRNLVVFNLQNPQ 112 (112)
Q Consensus 82 -~~~~~~~-------~----~~~~~~~~~~d~~v~~~d~~~~~ 112 (112)
...+... + .+..+++++.++.+...|+++|+
T Consensus 90 ~~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~ 132 (339)
T 2be1_A 90 STSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGE 132 (339)
T ss_dssp TTCSEEEECC----------CCEEEEECEEEEEEEEEETTTCC
T ss_pred eccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCc
Confidence 1112211 0 45578899999999999988875
No 277
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=96.51 E-value=0.084 Score=34.62 Aligned_cols=106 Identities=16% Similarity=0.124 Sum_probs=62.4
Q ss_pred eeEEEcCCCCEEEEEcCCCcEEEEEcCCCCCcEEEe---------eccCCeeEEEEccCCCEEEEeeCCCcEEEeeCCCC
Q 045566 2 LCSTWKDDGTTVFSGGCDKQVKMWPLLSGGQPVTVA---------MHDAPIKEVAWIPEMNLLATGSWDKTLKYWDTRQP 72 (112)
Q Consensus 2 ~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~~---------~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~ 72 (112)
.++..+++|.. ..|+.++-+..|+..++... .+. .....|.++...+++..+..|+.++-+..+|..++
T Consensus 360 ~~i~~d~~g~l-WiGt~~~Gl~~~~~~~~~~~-~~~~~~~~~~~~l~~~~v~~i~~d~~g~~lWigt~~~Gl~~~d~~~~ 437 (795)
T 4a2l_A 360 SCIVEDKDKNL-WIGTNDGGLNLYNPITQRFT-SYTLQEDESARGIGSNNIKAVYVDEKKSLVYIGTHAGGLSILHRNSG 437 (795)
T ss_dssp EEEEECTTSCE-EEEESSSCEEEECTTTCCEE-EECCC------CCSCSCEEEEEEETTTTEEEEEETTTEEEEEETTTC
T ss_pred EEEEECCCCCE-EEEECCCCeEEEcCCCCcEE-EEecCCCCcccCCCCccEEEEEEcCCCCEEEEEeCcCceeEEeCCCC
Confidence 45666666654 45666667888886654332 221 11356888888888883455666666888998776
Q ss_pred CceEEec-------CCCeEEEEeeCCCEEEEEeCCCcEEEEECcCC
Q 045566 73 NPVHTQQ-------LPDRCYALTVRYPLMVVGTADRNLVVFNLQNP 111 (112)
Q Consensus 73 ~~~~~~~-------~~~~~~~~~~~~~~~~~~~~d~~v~~~d~~~~ 111 (112)
+...-.. ..+..+...+++. +..|+. +.+..||..++
T Consensus 438 ~~~~~~~~~~~l~~~~v~~i~~d~~g~-lwigt~-~Gl~~~~~~~~ 481 (795)
T 4a2l_A 438 QVENFNQRNSQLVNENVYAILPDGEGN-LWLGTL-SALVRFNPEQR 481 (795)
T ss_dssp CEEEECTTTSCCSCSCEEEEEECSSSC-EEEEES-SCEEEEETTTT
T ss_pred cEEEeecCCCCcCCCeeEEEEECCCCC-EEEEec-CceeEEeCCCC
Confidence 5332211 1223444445555 455555 56888887653
No 278
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=96.40 E-value=0.065 Score=32.17 Aligned_cols=108 Identities=9% Similarity=-0.085 Sum_probs=63.1
Q ss_pred eeEEEcCCCC-EEEEEcCCCcEEEEEcCCCCCcEEEeeccCCeeEEEEcc-CCCEEEEeeCCCcEEEeeCCCCCceEEec
Q 045566 2 LCSTWKDDGT-TVFSGGCDKQVKMWPLLSGGQPVTVAMHDAPIKEVAWIP-EMNLLATGSWDKTLKYWDTRQPNPVHTQQ 79 (112)
Q Consensus 2 ~~~~~~~~~~-~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~~~~~~~~~i~~w~~~~~~~~~~~~ 79 (112)
..++|++.+. ++++-...+.|..+++........+.........+++.+ .+.++++-...+.|.+.++..........
T Consensus 119 ~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~~~~~l~~ 198 (386)
T 3v65_B 119 IALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLW 198 (386)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEEETTSCCEEEEECSSCSCCCCEEEETTTTEEEEEETTTTEEEECBTTSCSCEEEEC
T ss_pred EEEEEecCCCeEEEEeCCCCcEEEEecCCCCcEEEEeCCCCCccEEEEEeCCCeEEEEcCCCCeEEEEeCCCCceEEeec
Confidence 3578887544 445555677888888765443222222223446788887 45555666667788888876544332222
Q ss_pred C---CCeEEEEeeCCCEEEEEeC-C-CcEEEEECc
Q 045566 80 L---PDRCYALTVRYPLMVVGTA-D-RNLVVFNLQ 109 (112)
Q Consensus 80 ~---~~~~~~~~~~~~~~~~~~~-d-~~v~~~d~~ 109 (112)
. ....++++|.+..++.... + +.|...++.
T Consensus 199 ~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~d 233 (386)
T 3v65_B 199 QSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMD 233 (386)
T ss_dssp SSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETT
T ss_pred CCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCC
Confidence 2 2356778876665555443 3 456666653
No 279
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=96.33 E-value=0.055 Score=34.76 Aligned_cols=92 Identities=7% Similarity=-0.003 Sum_probs=52.1
Q ss_pred CcEEEEEcCCCCCcEEEeecc---------CCeeEEEEcc-CCCEEEEeeCCC-----------cEEEeeCCCCCceEEe
Q 045566 20 KQVKMWPLLSGGQPVTVAMHD---------APIKEVAWIP-EMNLLATGSWDK-----------TLKYWDTRQPNPVHTQ 78 (112)
Q Consensus 20 ~~v~~~~~~~~~~~~~~~~~~---------~~v~~~~~~~-~~~~~~~~~~~~-----------~i~~w~~~~~~~~~~~ 78 (112)
..+..||..+........... ..-.++.+.. +++.++.|+.+. .+.+||..+.......
T Consensus 369 ~~v~~yd~~~~~w~~~~~~~~~~~~~~~~~~~~~av~~~~~~~~i~v~GG~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~ 448 (656)
T 1k3i_A 369 TAMNWYYTSGSGDVKSAGKRQSNRGVAPDAMCGNAVMYDAVKGKILTFGGSPDYQDSDATTNAHIITLGEPGTSPNTVFA 448 (656)
T ss_dssp SEEEEEECSTTCEEEEEEECEETTEECCCCBTCEEEEEETTTTEEEEECCBSSSSSSBCCCCEEEEECCSTTSCCEEEEC
T ss_pred cceeeeecCCcceeecCCccccccccCCCCCCCceEeccCCCCeEEEEeCCCCCCCCCcCCcceEEEcCCCCCCCeeEEc
Confidence 346778876654322221111 1223444444 677888877532 5778888766544332
Q ss_pred --cCC----CeEEEEeeCCCEEEEEeCC-----------CcEEEEECcCC
Q 045566 79 --QLP----DRCYALTVRYPLMVVGTAD-----------RNLVVFNLQNP 111 (112)
Q Consensus 79 --~~~----~~~~~~~~~~~~~~~~~~d-----------~~v~~~d~~~~ 111 (112)
..+ .......+++..++.|+.+ ..+.+||..+.
T Consensus 449 ~~~mp~~R~~~~~~~l~~g~i~v~GG~~~~~~~~~~~~~~~v~~ydp~t~ 498 (656)
T 1k3i_A 449 SNGLYFARTFHTSVVLPDGSTFITGGQRRGIPFEDSTPVFTPEIYVPEQD 498 (656)
T ss_dssp TTCCSSCCBSCEEEECTTSCEEEECCBSBCCTTCCCSBCCCCEEEEGGGT
T ss_pred cCCCCCCcccCCeEECCCCCEEEECCcccCcCcCCCCcccceEEEcCCCC
Confidence 111 1234556789988888754 45788987653
No 280
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=96.16 E-value=0.056 Score=35.17 Aligned_cols=106 Identities=8% Similarity=-0.146 Sum_probs=55.0
Q ss_pred eEEEcCCCCEEEEEcC--CCcEEEEEcCCCCCcEEEeeccCCeeEEEEccC-CCEEEEeeCCCcEEEeeCCCCCceEEec
Q 045566 3 CSTWKDDGTTVFSGGC--DKQVKMWPLLSGGQPVTVAMHDAPIKEVAWIPE-MNLLATGSWDKTLKYWDTRQPNPVHTQQ 79 (112)
Q Consensus 3 ~~~~~~~~~~l~~~~~--~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~~~~~~~~~~i~~w~~~~~~~~~~~~ 79 (112)
.++++|.+..|+.... .+.|...++..................++++|+ +.++++-...+.|..+++..........
T Consensus 500 giavDp~~g~ly~td~~~~~~I~~~~~dG~~~~~l~~~~l~~PnGlavd~~~~~LY~aD~~~~~I~~~d~dG~~~~~~~~ 579 (699)
T 1n7d_A 500 AIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILE 579 (699)
T ss_dssp CEECCSSSSCCEECCCSSSCCEEBCCSSSCCCCEESCSSCSSCCCEEECTTTCCEEEEETTTTEEEEECSSSSCCEEECC
T ss_pred eEEEccCCCcEEEcccCCCCeEEEEeCCCCCeeEEEeCCCCCccEEEEeccCCEEEEEecCCCeEEEEccCCCceEEEEe
Confidence 4667775544444332 256666665432222221222234467999985 4555565667789999986543322221
Q ss_pred C-----CCeEEEEeeCCCEEE-EEeCCCcEEEEECcC
Q 045566 80 L-----PDRCYALTVRYPLMV-VGTADRNLVVFNLQN 110 (112)
Q Consensus 80 ~-----~~~~~~~~~~~~~~~-~~~~d~~v~~~d~~~ 110 (112)
. ....+++. +..++ +-...+.|..+|..+
T Consensus 580 ~~~~~~~P~glavd--~~~lywtd~~~~~V~~~d~~~ 614 (699)
T 1n7d_A 580 DEKRLAHPFSLAVF--EDKVFWTDIINEAIFSANRLT 614 (699)
T ss_dssp CSSSCSSCCCCEEE--TTEEEEECSTTTCEEEEETTT
T ss_pred cCCcCCCceEeEEE--CCEEEEEeCCCCeEEEEEccC
Confidence 1 11233333 33444 444456788887654
No 281
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=96.16 E-value=0.088 Score=31.17 Aligned_cols=107 Identities=8% Similarity=-0.092 Sum_probs=63.6
Q ss_pred eEEEcCC-CCEEEEEcCCCcEEEEEcCCCCCcEEEeeccCCeeEEEEccC-CCEEEEeeCC-CcEEEeeCCCCCceEEec
Q 045566 3 CSTWKDD-GTTVFSGGCDKQVKMWPLLSGGQPVTVAMHDAPIKEVAWIPE-MNLLATGSWD-KTLKYWDTRQPNPVHTQQ 79 (112)
Q Consensus 3 ~~~~~~~-~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~~~~~~~~-~~i~~w~~~~~~~~~~~~ 79 (112)
.+++++. ++..++-...+.|.+.++..................++++|. +.++++-... +.|...++..........
T Consensus 120 glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~ 199 (349)
T 3v64_C 120 GLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIAD 199 (349)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECTTCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEESCC
T ss_pred EEEEecCCCeEEEEcCCCCeEEEEcCCCCceEEEEeCCCCCcceEEEecCcCeEEEeccCCCCEEEEEeCCCCCcEEEEE
Confidence 4677764 444455566678888887644332223333345688999984 4455555445 778888876543222111
Q ss_pred C---CCeEEEEeeCCCEEEEEeC-CCcEEEEECc
Q 045566 80 L---PDRCYALTVRYPLMVVGTA-DRNLVVFNLQ 109 (112)
Q Consensus 80 ~---~~~~~~~~~~~~~~~~~~~-d~~v~~~d~~ 109 (112)
. ....+++++.+..|+.+.. .+.|..+|+.
T Consensus 200 ~~~~~PnGla~d~~~~~lY~aD~~~~~I~~~~~d 233 (349)
T 3v64_C 200 THLFWPNGLTIDYAGRRMYWVDAKHHVIERANLD 233 (349)
T ss_dssp SSCSCEEEEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred CCCCCcceEEEeCCCCEEEEEECCCCEEEEEeCC
Confidence 1 2357888886666665544 5567777764
No 282
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=96.05 E-value=0.093 Score=30.55 Aligned_cols=107 Identities=12% Similarity=-0.080 Sum_probs=61.8
Q ss_pred eeEEEcCCCC-EEEEEcCCCcEEEEEcCCC---CCcEE-EeeccCCeeEEEEcc-CCCEEEEeeCCCcEEEeeCCCCCce
Q 045566 2 LCSTWKDDGT-TVFSGGCDKQVKMWPLLSG---GQPVT-VAMHDAPIKEVAWIP-EMNLLATGSWDKTLKYWDTRQPNPV 75 (112)
Q Consensus 2 ~~~~~~~~~~-~l~~~~~~~~v~~~~~~~~---~~~~~-~~~~~~~v~~~~~~~-~~~~~~~~~~~~~i~~w~~~~~~~~ 75 (112)
..++|++.+. .+++-..++.|..+++... ..... +.........+++.+ .+..+++-...+.|.+.++......
T Consensus 33 ~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavd~~~~~ly~~d~~~~~I~~~~~~g~~~~ 112 (316)
T 1ijq_A 33 VALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRK 112 (316)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSSSEE
T ss_pred EEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCCCCcCEEEEeecCCeEEEEECCCCEEEEEeCCCCceE
Confidence 3678888654 4455566788998987651 22222 222223457888986 4555566567788999998654332
Q ss_pred EEec---CCCeEEEEeeCCCEEEEEeCC--CcEEEEEC
Q 045566 76 HTQQ---LPDRCYALTVRYPLMVVGTAD--RNLVVFNL 108 (112)
Q Consensus 76 ~~~~---~~~~~~~~~~~~~~~~~~~~d--~~v~~~d~ 108 (112)
.... .....++++|.+..++.+... +.|...++
T Consensus 113 ~~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~ 150 (316)
T 1ijq_A 113 TLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGL 150 (316)
T ss_dssp EEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEET
T ss_pred EEEECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcC
Confidence 2222 123567788766655555432 56666654
No 283
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=95.98 E-value=0.081 Score=34.46 Aligned_cols=107 Identities=5% Similarity=-0.138 Sum_probs=57.7
Q ss_pred eEEEcCC-CCEEEEEcCCCcEEEEEcCCCCCcEEEeeccCCeeEEEEccCCC-EEEEeeCC-CcEEEeeCCCCCceEEec
Q 045566 3 CSTWKDD-GTTVFSGGCDKQVKMWPLLSGGQPVTVAMHDAPIKEVAWIPEMN-LLATGSWD-KTLKYWDTRQPNPVHTQQ 79 (112)
Q Consensus 3 ~~~~~~~-~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~~~~~~~~-~~i~~w~~~~~~~~~~~~ 79 (112)
.+++++. ++++++-...+.|.+.++........+.........++++|.+. ++++-... +.|...++..........
T Consensus 457 glavD~~~g~LY~tD~~~~~I~v~d~dg~~~~~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~~~~l~~ 536 (699)
T 1n7d_A 457 GLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVT 536 (699)
T ss_dssp CEECCCSSSBCEECCTTTSCEEEEBSSSCCEEEECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCCCCEESC
T ss_pred eEEEEeeCCcEEEEeccCCeEEEEecCCCceEEEEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCCeeEEEe
Confidence 4566643 34444445567788888654332222222223457788988544 44433233 678877765432221111
Q ss_pred ---CCCeEEEEeeCCCEEEEE-eCCCcEEEEECc
Q 045566 80 ---LPDRCYALTVRYPLMVVG-TADRNLVVFNLQ 109 (112)
Q Consensus 80 ---~~~~~~~~~~~~~~~~~~-~~d~~v~~~d~~ 109 (112)
.....+++++++..|+.+ ...+.|..+|+.
T Consensus 537 ~~l~~PnGlavd~~~~~LY~aD~~~~~I~~~d~d 570 (699)
T 1n7d_A 537 ENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVN 570 (699)
T ss_dssp SSCSSCCCEEECTTTCCEEEEETTTTEEEEECSS
T ss_pred CCCCCccEEEEeccCCEEEEEecCCCeEEEEccC
Confidence 123568888876555554 445678887764
No 284
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=95.96 E-value=0.12 Score=31.01 Aligned_cols=97 Identities=8% Similarity=0.143 Sum_probs=59.7
Q ss_pred CCEEEEEcCCCcEEEEEcCCCCCcEEEeeccCCeeEEEEccC----CC---EEEEe-eC--CCcEEEeeCC-CCCceEEe
Q 045566 10 GTTVFSGGCDKQVKMWPLLSGGQPVTVAMHDAPIKEVAWIPE----MN---LLATG-SW--DKTLKYWDTR-QPNPVHTQ 78 (112)
Q Consensus 10 ~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~----~~---~~~~~-~~--~~~i~~w~~~-~~~~~~~~ 78 (112)
...++....++-+.+||+ .++.+..+.. +.++.+...|+ ++ +.++. .. ++.+.+|++. ....+...
T Consensus 40 ~s~ii~t~k~~gL~Vydl-~G~~l~~~~~--g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~~l~~i 116 (355)
T 3amr_A 40 NSKLITTNKKSGLVVYSL-DGKMLHSYNT--GKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGTLQSM 116 (355)
T ss_dssp GCEEEEEETTTEEEEEET-TSCEEEEECC--SCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTCCEEEC
T ss_pred ccEEEEEcCCCCEEEEcC-CCcEEEEccC--CCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCCceeec
Confidence 345555566678999998 7888777653 45677777663 22 22333 33 5789999663 22234333
Q ss_pred c----------CCCeEEEE--eeC-CC-EEEEEeCCCcEEEEECc
Q 045566 79 Q----------LPDRCYAL--TVR-YP-LMVVGTADRNLVVFNLQ 109 (112)
Q Consensus 79 ~----------~~~~~~~~--~~~-~~-~~~~~~~d~~v~~~d~~ 109 (112)
. .....+++ ++. +. ++++...++.+..|++.
T Consensus 117 ~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~ 161 (355)
T 3amr_A 117 TDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELK 161 (355)
T ss_dssp SCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEE
T ss_pred cccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEE
Confidence 1 12234566 553 43 68888889999998873
No 285
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=95.71 E-value=0.14 Score=29.83 Aligned_cols=107 Identities=5% Similarity=-0.152 Sum_probs=62.5
Q ss_pred eEEEcCCC-CEEEEEcCCCcEEEEEcCCCCCcEEEeeccCCeeEEEEccCCC-EEEEeeCC-CcEEEeeCCCCCceEEec
Q 045566 3 CSTWKDDG-TTVFSGGCDKQVKMWPLLSGGQPVTVAMHDAPIKEVAWIPEMN-LLATGSWD-KTLKYWDTRQPNPVHTQQ 79 (112)
Q Consensus 3 ~~~~~~~~-~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~~~~~~~~-~~i~~w~~~~~~~~~~~~ 79 (112)
.+++++.+ +..++-..++.|.+.++..................++++|.+. .+++.... +.|...++..........
T Consensus 81 glavd~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG~~~~~~~~ 160 (316)
T 1ijq_A 81 GLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVT 160 (316)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEEC
T ss_pred EEEEeecCCeEEEEECCCCEEEEEeCCCCceEEEEECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCCCCCeEEEEE
Confidence 56777644 4445556677888888753332222222335568899998544 44444333 678888775433222211
Q ss_pred C---CCeEEEEeeCCCEEEEEe-CCCcEEEEECc
Q 045566 80 L---PDRCYALTVRYPLMVVGT-ADRNLVVFNLQ 109 (112)
Q Consensus 80 ~---~~~~~~~~~~~~~~~~~~-~d~~v~~~d~~ 109 (112)
. ....+++++++..++.+. ..+.|..+|+.
T Consensus 161 ~~~~~P~gla~d~~~~~lY~~D~~~~~I~~~d~d 194 (316)
T 1ijq_A 161 ENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVN 194 (316)
T ss_dssp SSCSCEEEEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred CCCCCceEEEEeccCCEEEEEECCCCeEEEEecC
Confidence 1 235788888776666654 45678888765
No 286
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=95.64 E-value=0.21 Score=31.39 Aligned_cols=106 Identities=7% Similarity=0.035 Sum_probs=61.6
Q ss_pred eEEEcC-CCCEEEEEcC-CCcEEEEEcCCCCCcEEEeec---cCCeeEEEE-------ccCCCEEEEeeCCC-------c
Q 045566 3 CSTWKD-DGTTVFSGGC-DKQVKMWPLLSGGQPVTVAMH---DAPIKEVAW-------IPEMNLLATGSWDK-------T 63 (112)
Q Consensus 3 ~~~~~~-~~~~l~~~~~-~~~v~~~~~~~~~~~~~~~~~---~~~v~~~~~-------~~~~~~~~~~~~~~-------~ 63 (112)
.++|+| +...|+.+.. .+.|++.|+..+......... ......++| ++++..++.....+ .
T Consensus 143 ~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~~~~ 222 (496)
T 3kya_A 143 RLAFDPLNKDHLYICYDGHKAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDESPS 222 (496)
T ss_dssp EEEEETTEEEEEEEEEETEEEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTTGGGEEE
T ss_pred EEEEccCCCCEEEEEECCCCeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCCCcccCce
Confidence 578998 3555555543 467888887654443333221 224788999 99998555554433 2
Q ss_pred EEEeeCCC-CC--------ceEEecCCCeEEEEeeCCC-EEEEEeCCCcEEEEECc
Q 045566 64 LKYWDTRQ-PN--------PVHTQQLPDRCYALTVRYP-LMVVGTADRNLVVFNLQ 109 (112)
Q Consensus 64 i~~w~~~~-~~--------~~~~~~~~~~~~~~~~~~~-~~~~~~~d~~v~~~d~~ 109 (112)
+.+.+... +. .+..+. ....++++|++. ++++-..++.|..+|+.
T Consensus 223 V~~i~r~~~G~~~~~~~~~~v~~~~-~p~giavdp~~g~LYvtd~~~g~V~r~d~~ 277 (496)
T 3kya_A 223 VYIIKRNADGTFDDRSDIQLIAAYK-QCNGATIHPINGELYFNSYEKGQVFRLDLV 277 (496)
T ss_dssp EEEEECCTTSCCSTTSCEEEEEEES-CCCCEEECTTTCCEEEEETTTTEEEEECHH
T ss_pred EEEEecCCCCceeecccceeeccCC-CceEEEEcCCCCeEEEEECCCCEEEEEecc
Confidence 56665333 11 122222 335667888544 44555567779998876
No 287
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=95.61 E-value=0.18 Score=30.35 Aligned_cols=108 Identities=5% Similarity=-0.088 Sum_probs=59.5
Q ss_pred eeEEEcCCCCEEEEE-cCC-CcEEEEEcCCCCCcEEEeeccCCeeEEEEccCC-CEEEEeeCCCcEEEeeCCCCCceEEe
Q 045566 2 LCSTWKDDGTTVFSG-GCD-KQVKMWPLLSGGQPVTVAMHDAPIKEVAWIPEM-NLLATGSWDKTLKYWDTRQPNPVHTQ 78 (112)
Q Consensus 2 ~~~~~~~~~~~l~~~-~~~-~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~~~~~~~~~~i~~w~~~~~~~~~~~ 78 (112)
..++++|.+..|+.. ... +.|...++..................++++|++ .++++-...+.|..+++.........
T Consensus 205 ~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~~~~PnGlavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~ 284 (386)
T 3v65_B 205 RAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAVI 284 (386)
T ss_dssp EEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSCEEEEEEEGGGTEEEEEETTTTEEEEECTTSCSCEEEE
T ss_pred cEEEEEcCCCeEEEeccCCCCEEEEEeCCCCCcEEEEECCCCCeeeEEEeCCCCEEEEEECCCCEEEEEeCCCCeeEEEE
Confidence 357788866555444 333 677777765333322222233446789999754 45555556778999988654333222
Q ss_pred cC---CCeEEEEeeCCCEEEEEeCCCcEEEEECcC
Q 045566 79 QL---PDRCYALTVRYPLMVVGTADRNLVVFNLQN 110 (112)
Q Consensus 79 ~~---~~~~~~~~~~~~~~~~~~~d~~v~~~d~~~ 110 (112)
.. ....+++ ..+..+++-...+.|..+|..+
T Consensus 285 ~~~~~~P~giav-~~~~ly~td~~~~~V~~~~~~~ 318 (386)
T 3v65_B 285 SQGLPHPFAITV-FEDSLYWTDWHTKSINSANKFT 318 (386)
T ss_dssp CSSCSSEEEEEE-ETTEEEEEETTTTEEEEEETTT
T ss_pred ECCCCCceEEEE-ECCEEEEeeCCCCeEEEEECCC
Confidence 21 1134444 3344444444566777777433
No 288
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=95.59 E-value=0.18 Score=30.44 Aligned_cols=108 Identities=13% Similarity=-0.072 Sum_probs=62.8
Q ss_pred eeEEEcCCCCEE-EEEcCCCcEEEEEcCCCC---CcEEE-eeccCCeeEEEEcc-CCCEEEEeeCCCcEEEeeCCCCCce
Q 045566 2 LCSTWKDDGTTV-FSGGCDKQVKMWPLLSGG---QPVTV-AMHDAPIKEVAWIP-EMNLLATGSWDKTLKYWDTRQPNPV 75 (112)
Q Consensus 2 ~~~~~~~~~~~l-~~~~~~~~v~~~~~~~~~---~~~~~-~~~~~~v~~~~~~~-~~~~~~~~~~~~~i~~w~~~~~~~~ 75 (112)
..++|++.+..| ++-...+.|+.+++.... ....+ .........+++.+ .+.++++-...+.|.+.++......
T Consensus 115 ~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavD~~~~~lY~~d~~~~~I~~~~~~g~~~~ 194 (400)
T 3p5b_L 115 VALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRK 194 (400)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEECTTTCSEE
T ss_pred eEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCCCCCcccEEEEecCCceEEEECCCCeEEEEeCCCCceE
Confidence 467888855544 444556778888875421 12222 22334567888987 5666666667788999888765433
Q ss_pred EEecC---CCeEEEEeeCCCEEEEEeC--CCcEEEEECc
Q 045566 76 HTQQL---PDRCYALTVRYPLMVVGTA--DRNLVVFNLQ 109 (112)
Q Consensus 76 ~~~~~---~~~~~~~~~~~~~~~~~~~--d~~v~~~d~~ 109 (112)
..... ....++++|.+..++.... .+.|...++.
T Consensus 195 ~l~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~d 233 (400)
T 3p5b_L 195 TLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLN 233 (400)
T ss_dssp EEEECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETT
T ss_pred EEEeCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCC
Confidence 33222 2356788876655555542 3566666653
No 289
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=95.21 E-value=0.37 Score=31.63 Aligned_cols=104 Identities=12% Similarity=0.051 Sum_probs=58.0
Q ss_pred eeEEEcCCCCEEEEEcCCCcEEEEEcCCCCCcEEEe---eccCCeeEEEEccCCCEEEEeeCCCcEEEeeCCCCCceEEe
Q 045566 2 LCSTWKDDGTTVFSGGCDKQVKMWPLLSGGQPVTVA---MHDAPIKEVAWIPEMNLLATGSWDKTLKYWDTRQPNPVHTQ 78 (112)
Q Consensus 2 ~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~~---~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~ 78 (112)
.++...+++...+ |+.++-+..++..+++. ..+. .....|.++...+++.+.+.. . +-+..++..+.+.....
T Consensus 410 ~~i~~d~~g~lWi-gt~~~Gl~~~~~~~~~~-~~~~~~~~~~~~v~~i~~d~~g~lwigt-~-~Gl~~~~~~~~~~~~~~ 485 (781)
T 3v9f_A 410 LCSLKDSEGNLWF-GTYLGNISYYNTRLKKF-QIIELEKNELLDVRVFYEDKNKKIWIGT-H-AGVFVIDLASKKVIHHY 485 (781)
T ss_dssp EEEEECTTSCEEE-EETTEEEEEECSSSCEE-EECCSTTTCCCCEEEEEECTTSEEEEEE-T-TEEEEEESSSSSCCEEE
T ss_pred EEEEECCCCCEEE-EeccCCEEEEcCCCCcE-EEeccCCCCCCeEEEEEECCCCCEEEEE-C-CceEEEeCCCCeEEecc
Confidence 3455555565444 55555677777654432 2221 123568888888887765544 4 45788888765433222
Q ss_pred cC--------CCeEEEEeeCCCEEEEEeCCCcEEEEECcC
Q 045566 79 QL--------PDRCYALTVRYPLMVVGTADRNLVVFNLQN 110 (112)
Q Consensus 79 ~~--------~~~~~~~~~~~~~~~~~~~d~~v~~~d~~~ 110 (112)
.. .+..+....++. +..++.++.+..+|.++
T Consensus 486 ~~~~~~~~~~~i~~i~~d~~g~-lWigt~~~Gl~~~~~~~ 524 (781)
T 3v9f_A 486 DTSNSQLLENFVRSIAQDSEGR-FWIGTFGGGVGIYTPDM 524 (781)
T ss_dssp CTTTSSCSCSCEEEEEECTTCC-EEEEESSSCEEEECTTC
T ss_pred cCcccccccceeEEEEEcCCCC-EEEEEcCCCEEEEeCCC
Confidence 11 223444555555 55566555577777654
No 290
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=95.07 E-value=0.25 Score=28.92 Aligned_cols=107 Identities=7% Similarity=-0.122 Sum_probs=62.6
Q ss_pred eEEEcCC-CCEEEEEcCCCcEEEEEcCCCCCcEEEeeccCCeeEEEEccCCCEEEEee--CCCcEEEeeCCCCCceEEec
Q 045566 3 CSTWKDD-GTTVFSGGCDKQVKMWPLLSGGQPVTVAMHDAPIKEVAWIPEMNLLATGS--WDKTLKYWDTRQPNPVHTQQ 79 (112)
Q Consensus 3 ~~~~~~~-~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~--~~~~i~~w~~~~~~~~~~~~ 79 (112)
.+++++. ++..++-...+.|.++++..................+++.|.+..+.... ..+.|...++..........
T Consensus 83 glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~ 162 (318)
T 3sov_A 83 GLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIIIN 162 (318)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCSCEEEEC
T ss_pred EEEEEcCCCeEEEEECCCCEEEEEECCCCcEEEEEeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCCeEEEEE
Confidence 4677763 44445555667888888754333222223344568899998544444333 35778888876433322222
Q ss_pred C---CCeEEEEeeCCCEEEEEe-CCCcEEEEECc
Q 045566 80 L---PDRCYALTVRYPLMVVGT-ADRNLVVFNLQ 109 (112)
Q Consensus 80 ~---~~~~~~~~~~~~~~~~~~-~d~~v~~~d~~ 109 (112)
. ....+++++++..++.+. ..+.|..+|+.
T Consensus 163 ~~l~~Pnglavd~~~~~lY~aD~~~~~I~~~d~d 196 (318)
T 3sov_A 163 SEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLD 196 (318)
T ss_dssp SSCSCEEEEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred CCCCCccEEEEeccCCEEEEEECCCCEEEEEcCC
Confidence 2 235788888666666654 45668777764
No 291
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=94.99 E-value=0.31 Score=29.50 Aligned_cols=107 Identities=5% Similarity=-0.131 Sum_probs=63.4
Q ss_pred eEEEcC-CCCEEEEEcCCCcEEEEEcCCCCCcEEEeeccCCeeEEEEccCCC-EEEEeeC-CCcEEEeeCCCCCceEEec
Q 045566 3 CSTWKD-DGTTVFSGGCDKQVKMWPLLSGGQPVTVAMHDAPIKEVAWIPEMN-LLATGSW-DKTLKYWDTRQPNPVHTQQ 79 (112)
Q Consensus 3 ~~~~~~-~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~~~~~~~-~~~i~~w~~~~~~~~~~~~ 79 (112)
.+++++ .+++.++-...+.|.+.++........+.........++++|.+. ++.+-.. .+.|...++..........
T Consensus 163 glavD~~~~~lY~~d~~~~~I~~~~~~g~~~~~l~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~~~~~~~ 242 (400)
T 3p5b_L 163 GLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVT 242 (400)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEECTTTCSEEEEEECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSCSCEEEEC
T ss_pred cEEEEecCCceEEEECCCCeEEEEeCCCCceEEEEeCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCCccEEEEE
Confidence 466776 444445555667888888654433233333344568899998544 4444323 4678888876544333222
Q ss_pred C---CCeEEEEeeCCCEEEEEeC-CCcEEEEECc
Q 045566 80 L---PDRCYALTVRYPLMVVGTA-DRNLVVFNLQ 109 (112)
Q Consensus 80 ~---~~~~~~~~~~~~~~~~~~~-d~~v~~~d~~ 109 (112)
. ....+++++.+..|+.+.. ...|..+|+.
T Consensus 243 ~~l~~P~glavd~~~~~lY~aD~~~~~I~~~d~d 276 (400)
T 3p5b_L 243 ENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVN 276 (400)
T ss_dssp SSCSCEEEEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred CCCCceEEEEEEeCCCEEEEEECCCCEEEEEeCC
Confidence 2 2357888887776666644 4567777764
No 292
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=94.98 E-value=0.3 Score=29.35 Aligned_cols=106 Identities=9% Similarity=0.121 Sum_probs=66.0
Q ss_pred eEEE--cCC-CC-EEEEEcCCCcEEEEEcCC---C----CCcEEEeeccCCeeEEEEccCCCEEEEeeCCCcEEEeeCC-
Q 045566 3 CSTW--KDD-GT-TVFSGGCDKQVKMWPLLS---G----GQPVTVAMHDAPIKEVAWIPEMNLLATGSWDKTLKYWDTR- 70 (112)
Q Consensus 3 ~~~~--~~~-~~-~l~~~~~~~~v~~~~~~~---~----~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~- 70 (112)
.+|+ +|. +. ++++...++.+..|++.. + +.++++. -.+.+..+...+....++.+-++.-|..++.+
T Consensus 132 Glcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~-lgsq~EgcvvDd~~g~Lyv~eEd~GIw~~da~p 210 (355)
T 3amr_A 132 GFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFK-MNSQTEGMAADDEYGRLYIAEEDEAIWKFSAEP 210 (355)
T ss_dssp CEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEE-CSSCEEEEEEETTTTEEEEEETTTEEEEEECST
T ss_pred EEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEec-CCCCcceEEEcCCCCeEEEecccceEEEEeCCc
Confidence 3566 663 44 677788889999888732 2 2233443 24567788888877788888888666666644
Q ss_pred -C---CCceEEec-----CCCeEEEE--eeCCC-EEEEEe-CCCcEEEEECc
Q 045566 71 -Q---PNPVHTQQ-----LPDRCYAL--TVRYP-LMVVGT-ADRNLVVFNLQ 109 (112)
Q Consensus 71 -~---~~~~~~~~-----~~~~~~~~--~~~~~-~~~~~~-~d~~v~~~d~~ 109 (112)
. .+.+.... .....+++ .+++. ++++++ .+....+||.+
T Consensus 211 ~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQG~~s~~Vydr~ 262 (355)
T 3amr_A 211 DGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQGNSSYAIYDRQ 262 (355)
T ss_dssp TSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEGGGTEEEEEESS
T ss_pred CCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEEcCCCCEEEEEECC
Confidence 2 22333221 23456666 34445 565555 57789999986
No 293
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=94.98 E-value=0.28 Score=29.08 Aligned_cols=93 Identities=11% Similarity=0.060 Sum_probs=53.7
Q ss_pred eeEEEcCCCCEEEEEcCCCcEEEEEcCCCCC--cEEEe---eccCCeeEEEEccC----CCEEEEeeCC-----CcEEEe
Q 045566 2 LCSTWKDDGTTVFSGGCDKQVKMWPLLSGGQ--PVTVA---MHDAPIKEVAWIPE----MNLLATGSWD-----KTLKYW 67 (112)
Q Consensus 2 ~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~--~~~~~---~~~~~v~~~~~~~~----~~~~~~~~~~-----~~i~~w 67 (112)
..++|.|+|+.+++ ..++.|.+++ .++. ...+. ........++++|+ +.++++-... +.|..+
T Consensus 34 ~~ia~~pdG~l~V~-e~~g~I~~i~--~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~v~r~ 110 (352)
T 2ism_A 34 WALAFLPDGGMLIA-ERPGRIRLFR--EGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQVVRL 110 (352)
T ss_dssp EEEEECTTSCEEEE-ETTTEEEEEE--TTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSEEEEEEE
T ss_pred eEEEEcCCCeEEEE-eCCCeEEEEE--CCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCccEEEEE
Confidence 36889999986555 4558899888 2321 11111 12356789999997 4444443332 557777
Q ss_pred eCCCCC-----ceE-EecC------CCeEEEEeeCCCEEEEE
Q 045566 68 DTRQPN-----PVH-TQQL------PDRCYALTVRYPLMVVG 97 (112)
Q Consensus 68 ~~~~~~-----~~~-~~~~------~~~~~~~~~~~~~~~~~ 97 (112)
+..... .+. .+.. ....+.|.+++.++++.
T Consensus 111 ~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~ 152 (352)
T 2ism_A 111 RHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVTT 152 (352)
T ss_dssp EECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEEC
T ss_pred EeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEEE
Confidence 765431 111 1221 12578899999655553
No 294
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=94.94 E-value=0.45 Score=31.23 Aligned_cols=105 Identities=9% Similarity=-0.098 Sum_probs=57.2
Q ss_pred eeEEEcCCCCEEEEEcCCCcEEEEEcCCCCCcEEEeec-----cCCeeEEEEccCCCEEEEeeCCCcEEEeeCCCCCceE
Q 045566 2 LCSTWKDDGTTVFSGGCDKQVKMWPLLSGGQPVTVAMH-----DAPIKEVAWIPEMNLLATGSWDKTLKYWDTRQPNPVH 76 (112)
Q Consensus 2 ~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~-----~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~ 76 (112)
.++...+++...+ |+. +-+..++..+++........ ...|.++...+++...+.....| +..+|..+.+. .
T Consensus 453 ~~i~~d~~g~lwi-gt~-~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~~~G-l~~~~~~~~~~-~ 528 (781)
T 3v9f_A 453 RVFYEDKNKKIWI-GTH-AGVFVIDLASKKVIHHYDTSNSQLLENFVRSIAQDSEGRFWIGTFGGG-VGIYTPDMQLV-R 528 (781)
T ss_dssp EEEEECTTSEEEE-EET-TEEEEEESSSSSCCEEECTTTSSCSCSCEEEEEECTTCCEEEEESSSC-EEEECTTCCEE-E
T ss_pred EEEEECCCCCEEE-EEC-CceEEEeCCCCeEEecccCcccccccceeEEEEEcCCCCEEEEEcCCC-EEEEeCCCCeE-E
Confidence 3455555665444 444 45888887655443222111 35688998888888766554345 66677765432 2
Q ss_pred EecC-------CCeEEEEeeCCCEEEEEeCCCcEEEEECcCC
Q 045566 77 TQQL-------PDRCYALTVRYPLMVVGTADRNLVVFNLQNP 111 (112)
Q Consensus 77 ~~~~-------~~~~~~~~~~~~~~~~~~~d~~v~~~d~~~~ 111 (112)
.+.. .+..+...+++. +..++.+|-+..||.++.
T Consensus 529 ~~~~~~~l~~~~i~~i~~d~~g~-lWi~T~~Glv~~~d~~~~ 569 (781)
T 3v9f_A 529 KFNQYEGFCSNTINQIYRSSKGQ-MWLATGEGLVCFPSARNF 569 (781)
T ss_dssp EECTTTTCSCSCEEEEEECTTSC-EEEEETTEEEEESCTTTC
T ss_pred EccCCCCCCCCeeEEEEECCCCC-EEEEECCCceEEECCCCC
Confidence 2221 123444445555 444555554377776543
No 295
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=94.91 E-value=0.26 Score=28.36 Aligned_cols=70 Identities=11% Similarity=0.033 Sum_probs=44.9
Q ss_pred CCeeEEEEccCCCEEEEeeCCCcEEEeeCCCCCceEEecC--CCeEEEEeeCCCEEEEEeCCC--cEEEEECcCC
Q 045566 41 APIKEVAWIPEMNLLATGSWDKTLKYWDTRQPNPVHTQQL--PDRCYALTVRYPLMVVGTADR--NLVVFNLQNP 111 (112)
Q Consensus 41 ~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~d~--~v~~~d~~~~ 111 (112)
.....++|++++.++++-..++.|..+|.... ....... ....+++.++++.+++..... .|..+|..++
T Consensus 32 ~~pegia~~~~g~lyv~d~~~~~I~~~d~~g~-~~~~~~~~~~p~gia~~~dG~l~vad~~~~~~~v~~~d~~~g 105 (306)
T 2p4o_A 32 TFLENLASAPDGTIFVTNHEVGEIVSITPDGN-QQIHATVEGKVSGLAFTSNGDLVATGWNADSIPVVSLVKSDG 105 (306)
T ss_dssp CCEEEEEECTTSCEEEEETTTTEEEEECTTCC-EEEEEECSSEEEEEEECTTSCEEEEEECTTSCEEEEEECTTS
T ss_pred CCcceEEECCCCCEEEEeCCCCeEEEECCCCc-eEEEEeCCCCceeEEEcCCCcEEEEeccCCcceEEEEcCCCC
Confidence 45678999999887777767888999987653 2222222 235677888888555443322 3666665544
No 296
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=94.87 E-value=0.33 Score=29.20 Aligned_cols=86 Identities=13% Similarity=0.208 Sum_probs=59.3
Q ss_pred CCcEEEEEcCCCCCcEEEeeccCCeeEEEEccCCCEEEEeeCCCcEEEeeCCCCCceEEecCCCeEEEEeeC-CCEEEEE
Q 045566 19 DKQVKMWPLLSGGQPVTVAMHDAPIKEVAWIPEMNLLATGSWDKTLKYWDTRQPNPVHTQQLPDRCYALTVR-YPLMVVG 97 (112)
Q Consensus 19 ~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 97 (112)
+.+|.+-|+..+..+...+-. --+..++|..+.++.-. .+.+.++|+++.+.+..+..+....-|.+- .+.++..
T Consensus 48 ~~~VvIiDl~n~~~~~Rrpi~---AdsAIMnP~~~ViALra-g~~LQiFnletK~klks~~~~e~VvfWkWis~~~L~lV 123 (365)
T 2xzh_A 48 QAQVVIIDMNDPSNPIRRPIS---ADSAIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTMTDDVTFWKWISLNTVALV 123 (365)
T ss_dssp EEEEEEEETTSTTSCEEEECC---CSEEEECSSSSEEEEEE-TTEEEEEETTTTEEEEEEECSSCEEEEEECSSSEEEEE
T ss_pred CCEEEEEECCCCCCccccccc---cceeeeCCCccEEEEec-CCeEEEechHHhhhhcceecCCccEEEEecCCCeEEEE
Confidence 347888898877665433211 12445788887776654 678999999999999998887776667663 3444444
Q ss_pred eCCCcEEEEECc
Q 045566 98 TADRNLVVFNLQ 109 (112)
Q Consensus 98 ~~d~~v~~~d~~ 109 (112)
+ +..|+.|++.
T Consensus 124 T-~taVyHWs~~ 134 (365)
T 2xzh_A 124 T-DNAVYHWSME 134 (365)
T ss_dssp E-SSEEEEEESS
T ss_pred c-CCcEEEEccc
Confidence 3 4578888875
No 297
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=94.62 E-value=0.31 Score=27.87 Aligned_cols=101 Identities=18% Similarity=0.177 Sum_probs=51.2
Q ss_pred CCCEEEEEcCC-------CcEEEEEcCCCCCcE--EEeeccCCeeEEEEccCCCEEEEeeCC-----CcEEEeeCCCCCc
Q 045566 9 DGTTVFSGGCD-------KQVKMWPLLSGGQPV--TVAMHDAPIKEVAWIPEMNLLATGSWD-----KTLKYWDTRQPNP 74 (112)
Q Consensus 9 ~~~~l~~~~~~-------~~v~~~~~~~~~~~~--~~~~~~~~v~~~~~~~~~~~~~~~~~~-----~~i~~w~~~~~~~ 74 (112)
+++.++.|+.+ ..+..||+.+.+-.. ..+........+.+ ++..++.|+.+ ..+..||+.+.+.
T Consensus 155 ~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W 232 (302)
T 2xn4_A 155 GGLLYAVGGYDVASRQCLSTVECYNATTNEWTYIAEMSTRRSGAGVGVL--NNLLYAVGGHDGPLVRKSVEVYDPTTNAW 232 (302)
T ss_dssp TTEEEEECCEETTTTEECCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCBSSSSBCCCEEEEETTTTEE
T ss_pred CCEEEEEeCCCCCCCccccEEEEEeCCCCcEEECCCCccccccccEEEE--CCEEEEECCCCCCcccceEEEEeCCCCCE
Confidence 45555655432 347788876543211 11111111122222 56677777654 4688899877653
Q ss_pred eEEecCCC---eEEEEeeCCCEEEEEeCCC-----cEEEEECcCC
Q 045566 75 VHTQQLPD---RCYALTVRYPLMVVGTADR-----NLVVFNLQNP 111 (112)
Q Consensus 75 ~~~~~~~~---~~~~~~~~~~~~~~~~~d~-----~v~~~d~~~~ 111 (112)
...-..+. .......++..++.|+.++ .+.+||+.+.
T Consensus 233 ~~~~~~~~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~ 277 (302)
T 2xn4_A 233 RQVADMNMCRRNAGVCAVNGLLYVVGGDDGSCNLASVEYYNPTTD 277 (302)
T ss_dssp EEECCCSSCCBSCEEEEETTEEEEECCBCSSSBCCCEEEEETTTT
T ss_pred eeCCCCCCccccCeEEEECCEEEEECCcCCCcccccEEEEcCCCC
Confidence 32221111 1122234666777776553 4888888764
No 298
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=94.55 E-value=0.63 Score=31.05 Aligned_cols=107 Identities=5% Similarity=-0.162 Sum_probs=63.1
Q ss_pred eEEEcCCCC-EEEEEcCCCcEEEEEcCCCCCcEEEeeccCCeeEEEEccC-CCEEEEeeCC-CcEEEeeCCCCCceEEec
Q 045566 3 CSTWKDDGT-TVFSGGCDKQVKMWPLLSGGQPVTVAMHDAPIKEVAWIPE-MNLLATGSWD-KTLKYWDTRQPNPVHTQQ 79 (112)
Q Consensus 3 ~~~~~~~~~-~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~~~~~~~~-~~i~~w~~~~~~~~~~~~ 79 (112)
.+++++.++ +.++-...+.|.+.++........+.........|++.|. +.++++-... +.|...++..........
T Consensus 475 GLAvD~~~~~LY~tD~~~~~I~v~~ldG~~~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~~~~lv~ 554 (791)
T 3m0c_C 475 GLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVT 554 (791)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEEC
T ss_pred eeeeeecCCcEEEEecCCCeEEEEeCCCCeEEEEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCCceEEEEe
Confidence 577777554 4445566778888887643332223333445789999985 4444444333 678888886554333332
Q ss_pred C---CCeEEEEeeCCCEEEEEeC-CCcEEEEECc
Q 045566 80 L---PDRCYALTVRYPLMVVGTA-DRNLVVFNLQ 109 (112)
Q Consensus 80 ~---~~~~~~~~~~~~~~~~~~~-d~~v~~~d~~ 109 (112)
. ....+++++....|+.+.. ...|...|+.
T Consensus 555 ~~l~~P~GLavD~~~~~LYwaD~~~~~I~~~d~d 588 (791)
T 3m0c_C 555 ENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVN 588 (791)
T ss_dssp SSCSCEEEEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred CCCCCceEEEEecCCCeEEEEeCCCCcEEEEecC
Confidence 2 2356778876666666543 4457666653
No 299
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=94.48 E-value=0.57 Score=30.29 Aligned_cols=88 Identities=8% Similarity=-0.059 Sum_probs=54.4
Q ss_pred EEEEEcCC----CCCcEEEeeccCCeeEEEEccCCCEEEEee-CCCcEEEeeCCCC------Cc-------eEEecC--C
Q 045566 22 VKMWPLLS----GGQPVTVAMHDAPIKEVAWIPEMNLLATGS-WDKTLKYWDTRQP------NP-------VHTQQL--P 81 (112)
Q Consensus 22 v~~~~~~~----~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~-~~~~i~~w~~~~~------~~-------~~~~~~--~ 81 (112)
|.+.|.+. +.....+..-....+.+.++|+|++++.++ .+.++.++|++.- +. ...... .
T Consensus 300 v~ViD~~~~~~~~~~~~~~iP~pksPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e~GlG 379 (638)
T 3sbq_A 300 TPVLDGRKKDGKDSKFTRYVPVPKNPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPELGLG 379 (638)
T ss_dssp CCEEECSCBTTBCCSSEEEEEESSSCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCBCCSC
T ss_pred eeEEccccccccCCceEEEEeCCCCCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeeccCCCc
Confidence 56666654 223322222334457899999999887655 5888999998631 11 111111 2
Q ss_pred CeEEEEeeCCCEEEEEeCCCcEEEEECc
Q 045566 82 DRCYALTVRYPLMVVGTADRNLVVFNLQ 109 (112)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~d~~v~~~d~~ 109 (112)
-...+|+++|....+.--|..|.-|++.
T Consensus 380 PlHt~Fd~~G~aYTtlfidSqvvkWni~ 407 (638)
T 3sbq_A 380 PLHTTFDGRGNAYTTLFIDSQVVKWNME 407 (638)
T ss_dssp EEEEEECSSSEEEEEETTTTEEEEEEHH
T ss_pred ccEEEECCCCceEeeeeecceEEEEecc
Confidence 2456788888544555579999999875
No 300
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=94.36 E-value=0.55 Score=29.58 Aligned_cols=106 Identities=8% Similarity=-0.049 Sum_probs=63.7
Q ss_pred eeEEE-------cCCCCEEEEEcCCC-------cEEEEEcCC-CCCc-----EEEeeccCCeeEEEEcc-CCCEEEEeeC
Q 045566 2 LCSTW-------KDDGTTVFSGGCDK-------QVKMWPLLS-GGQP-----VTVAMHDAPIKEVAWIP-EMNLLATGSW 60 (112)
Q Consensus 2 ~~~~~-------~~~~~~l~~~~~~~-------~v~~~~~~~-~~~~-----~~~~~~~~~v~~~~~~~-~~~~~~~~~~ 60 (112)
..++| +++++.|+++...+ .+.+.+... +... ..+... .....++++| ++.++++-..
T Consensus 189 ~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~~~~V~~i~r~~~G~~~~~~~~~~v~~~-~~p~giavdp~~g~LYvtd~~ 267 (496)
T 3kya_A 189 RSIAFNKKIEGYADEAEYMIVAIDYDGKGDESPSVYIIKRNADGTFDDRSDIQLIAAY-KQCNGATIHPINGELYFNSYE 267 (496)
T ss_dssp EEEEECCCBTTTBCTTCEEEEEECCCTTGGGEEEEEEEECCTTSCCSTTSCEEEEEEE-SCCCCEEECTTTCCEEEEETT
T ss_pred cEEEEeecccccCCCCCEEEEEeCCCCCcccCceEEEEecCCCCceeecccceeeccC-CCceEEEEcCCCCeEEEEECC
Confidence 35788 99998666665443 255565332 1221 233322 2346788899 5666667777
Q ss_pred CCcEEEeeCC-------CCCc-----------eEE-ecC----CCeEEEEeeCCCEEEEE-eCCCcEEEEEC
Q 045566 61 DKTLKYWDTR-------QPNP-----------VHT-QQL----PDRCYALTVRYPLMVVG-TADRNLVVFNL 108 (112)
Q Consensus 61 ~~~i~~w~~~-------~~~~-----------~~~-~~~----~~~~~~~~~~~~~~~~~-~~d~~v~~~d~ 108 (112)
++.|..+|+. ++.. ... ... ....++++|+++.++.+ .....|+.++.
T Consensus 268 ~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g~~~~l~~~~~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~ 339 (496)
T 3kya_A 268 KGQVFRLDLVDYFKTIKNGGSWDPIVKNNPNTFKQLFTIADPSWEFQIFIHPTGKYAYFGVINNHYFMRSDY 339 (496)
T ss_dssp TTEEEEECHHHHHHHHHTTCCCCCBGGGCTTTEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEE
T ss_pred CCEEEEEecccccccccCceeecccccccccccceeEecCCCCCceEEEEcCCCCEEEEEeCCCCEEEEEec
Confidence 8889999987 4432 111 111 23578999999965555 44567777553
No 301
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=94.34 E-value=0.45 Score=28.54 Aligned_cols=91 Identities=7% Similarity=0.101 Sum_probs=53.7
Q ss_pred CCcEEEEEcCCCCCcEE----Eeec-cCCeeEEEEccCCCEEEEeeC-----------------CCcEEEeeCCCCCceE
Q 045566 19 DKQVKMWPLLSGGQPVT----VAMH-DAPIKEVAWIPEMNLLATGSW-----------------DKTLKYWDTRQPNPVH 76 (112)
Q Consensus 19 ~~~v~~~~~~~~~~~~~----~~~~-~~~v~~~~~~~~~~~~~~~~~-----------------~~~i~~w~~~~~~~~~ 76 (112)
+..+.+|++........ +.+. -...+.+.+.++|.++++... .+.+.-++..+.+.+.
T Consensus 138 ~s~ielf~~d~~~~~~~~~~~~~g~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~~~~~~~~ 217 (355)
T 3sre_A 138 SSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSPNDVRVVA 217 (355)
T ss_dssp CCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEECTTCCEEEE
T ss_pred CCeEEEEEEECCCCEEEEEeccccCCCCCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEEEEECCeEEEee
Confidence 45677777654433222 2211 245688999999987776541 2344445543211111
Q ss_pred EecCCCeEEEEeeCCCEEEEEe-CCCcEEEEECc
Q 045566 77 TQQLPDRCYALTVRYPLMVVGT-ADRNLVVFNLQ 109 (112)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~-~d~~v~~~d~~ 109 (112)
.--.-.+.++|+|+++.++.+. ..+.|..|++.
T Consensus 218 ~~l~~pNGia~spDg~~lYvadt~~~~I~~~~~~ 251 (355)
T 3sre_A 218 EGFDFANGINISPDGKYVYIAELLAHKIHVYEKH 251 (355)
T ss_dssp EEESSEEEEEECTTSSEEEEEEGGGTEEEEEEEC
T ss_pred cCCcccCcceECCCCCEEEEEeCCCCeEEEEEEC
Confidence 1122346799999998877765 46788888875
No 302
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=94.30 E-value=0.38 Score=27.48 Aligned_cols=101 Identities=14% Similarity=0.193 Sum_probs=51.9
Q ss_pred CCCEEEEEcCC-----CcEEEEEcCCCCCcEE--EeeccCCeeEEEEccCCCEEEEeeCC-----CcEEEeeCCCCCceE
Q 045566 9 DGTTVFSGGCD-----KQVKMWPLLSGGQPVT--VAMHDAPIKEVAWIPEMNLLATGSWD-----KTLKYWDTRQPNPVH 76 (112)
Q Consensus 9 ~~~~l~~~~~~-----~~v~~~~~~~~~~~~~--~~~~~~~v~~~~~~~~~~~~~~~~~~-----~~i~~w~~~~~~~~~ 76 (112)
+++.++.|+.+ ..+..||+.+.+-... ++........+.+ ++..++.|+.+ ..+.+||+.+.+...
T Consensus 159 ~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~ 236 (301)
T 2vpj_A 159 SGVIYCLGGYDGLNILNSVEKYDPHTGHWTNVTPMATKRSGAGVALL--NDHIYVVGGFDGTAHLSSVEAYNIRTDSWTT 236 (301)
T ss_dssp TTEEEEECCBCSSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCBCSSSBCCCEEEEETTTTEEEE
T ss_pred CCEEEEECCCCCCcccceEEEEeCCCCcEEeCCCCCcccccceEEEE--CCEEEEEeCCCCCcccceEEEEeCCCCcEEE
Confidence 45566666543 4577888765432111 1111111122222 56677777653 468889987765332
Q ss_pred EecCCC---eEEEEeeCCCEEEEEeCC-----CcEEEEECcCC
Q 045566 77 TQQLPD---RCYALTVRYPLMVVGTAD-----RNLVVFNLQNP 111 (112)
Q Consensus 77 ~~~~~~---~~~~~~~~~~~~~~~~~d-----~~v~~~d~~~~ 111 (112)
.-..+. ...+...++..++.|+.+ ..+.+||+++.
T Consensus 237 ~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~ 279 (301)
T 2vpj_A 237 VTSMTTPRCYVGATVLRGRLYAIAGYDGNSLLSSIECYDPIID 279 (301)
T ss_dssp ECCCSSCCBSCEEEEETTEEEEECCBCSSSBEEEEEEEETTTT
T ss_pred CCCCCCcccceeEEEECCEEEEEcCcCCCcccccEEEEcCCCC
Confidence 222111 112223366667777655 34778887654
No 303
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=93.71 E-value=0.75 Score=28.85 Aligned_cols=87 Identities=13% Similarity=0.203 Sum_probs=57.1
Q ss_pred CCCcEEEEEcCCCCCcEEEeeccCCeeEEEEccCCCEEEEeeCCCcEEEeeCCCCCceEEecCCCeEEEEee-CCCEEEE
Q 045566 18 CDKQVKMWPLLSGGQPVTVAMHDAPIKEVAWIPEMNLLATGSWDKTLKYWDTRQPNPVHTQQLPDRCYALTV-RYPLMVV 96 (112)
Q Consensus 18 ~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 96 (112)
++.+|-+-|+..+..+...+.. --+.-++|..+.++.-. .+.+.++|+++.+.+..+..+....-|.+ +.+.++.
T Consensus 46 ~~~~vvIiDl~~~~~~~rrpi~---AdsAIMnP~~~iiALra-g~~lQiFnle~K~klks~~~~e~VvfWkWis~~~l~l 121 (494)
T 1bpo_A 46 EQAQVVIIDMNDPSNPIRRPIS---ADSAIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTMTDDVTFWKWISLNTVAL 121 (494)
T ss_dssp TCCEEEEEETTSTTSCEEEECC---CSEEEECSSSSCEEEEE-TTEEEEEETTTTEEEEEEECSSCCCEEEEEETTEEEE
T ss_pred CCCeEEEEECCCCCcceecccc---cceeeeCCCCcEEEEec-CCeEEEEchHHhhhhcceecCCCceEEEecCCCeEEE
Confidence 3447888998877665433211 12455788777666554 78899999999999988876655545544 3344444
Q ss_pred EeCCCcEEEEECc
Q 045566 97 GTADRNLVVFNLQ 109 (112)
Q Consensus 97 ~~~d~~v~~~d~~ 109 (112)
.+ +..|+.|++.
T Consensus 122 VT-~taVyHWsi~ 133 (494)
T 1bpo_A 122 VT-DNAVYHWSME 133 (494)
T ss_dssp EC-SSEEEEEESS
T ss_pred Ec-CCeeEEeccc
Confidence 43 4578888875
No 304
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=93.67 E-value=0.73 Score=28.54 Aligned_cols=98 Identities=8% Similarity=0.088 Sum_probs=54.4
Q ss_pred eeEEEcCCCCEEEEEcCCCcEEEEEcCCCCCcE--EEee------ccCCeeEEEEccC----CCEEEEeeC---------
Q 045566 2 LCSTWKDDGTTVFSGGCDKQVKMWPLLSGGQPV--TVAM------HDAPIKEVAWIPE----MNLLATGSW--------- 60 (112)
Q Consensus 2 ~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~--~~~~------~~~~v~~~~~~~~----~~~~~~~~~--------- 60 (112)
..++|.|+|+++++-...+.|++++...++... .+.. .+.....++|+|+ +.+.++-..
T Consensus 30 ~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~~~~~~~~~ 109 (454)
T 1cru_A 30 HALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKNPKSTDKE 109 (454)
T ss_dssp EEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEECTTC--CC
T ss_pred eEEEEcCCCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEeccccCCCccc
Confidence 368999999987776554578887754443211 1211 2456679999994 444444332
Q ss_pred ---CCcEEEeeCCCC-------CceE-EecC----CCeEEEEeeCCCEEEEEeC
Q 045566 61 ---DKTLKYWDTRQP-------NPVH-TQQL----PDRCYALTVRYPLMVVGTA 99 (112)
Q Consensus 61 ---~~~i~~w~~~~~-------~~~~-~~~~----~~~~~~~~~~~~~~~~~~~ 99 (112)
...|.-++.... +.+. .+.. ....+.|.+++.+.++.+.
T Consensus 110 ~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~Lyv~~Gd 163 (454)
T 1cru_A 110 LPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKIYYTIGD 163 (454)
T ss_dssp SCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSCEEEEECC
T ss_pred cccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCeEEEEECC
Confidence 123444444321 1111 1211 2357889999986666543
No 305
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=93.56 E-value=0.65 Score=27.64 Aligned_cols=94 Identities=10% Similarity=-0.005 Sum_probs=53.4
Q ss_pred eeEEEcCCCCEEEEEcCCCcEEEEEcCCCC-CcEEEe---eccCCeeEEEEccC----CCEEEEeeC---C----CcEEE
Q 045566 2 LCSTWKDDGTTVFSGGCDKQVKMWPLLSGG-QPVTVA---MHDAPIKEVAWIPE----MNLLATGSW---D----KTLKY 66 (112)
Q Consensus 2 ~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~-~~~~~~---~~~~~v~~~~~~~~----~~~~~~~~~---~----~~i~~ 66 (112)
..++|.|+|+++++ ..++.|++++ ..++ ....+. ........++++|+ +.++++-.. + ..|..
T Consensus 32 ~~ia~~pdG~l~V~-e~~g~I~~~d-~~G~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~~~v~r 109 (354)
T 3a9g_A 32 WSIAPLGGGRYLVT-ERPGRLVLIS-PSGKKLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGHIRNRVIR 109 (354)
T ss_dssp EEEEEEETTEEEEE-ETTTEEEEEC-SSCEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGCEEEEEEE
T ss_pred eEEEEcCCCeEEEE-eCCCEEEEEe-CCCceEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCCcceEEEE
Confidence 36889999985554 4558898887 3343 111111 12356789999997 444444332 2 45666
Q ss_pred eeCCCC--C-----ce-EEecC----CCeEEEEeeCCCEEEEE
Q 045566 67 WDTRQP--N-----PV-HTQQL----PDRCYALTVRYPLMVVG 97 (112)
Q Consensus 67 w~~~~~--~-----~~-~~~~~----~~~~~~~~~~~~~~~~~ 97 (112)
++.... . .+ ..+.. ....+.|.|++.++++.
T Consensus 110 ~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~Lyvt~ 152 (354)
T 3a9g_A 110 GRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGMLYITT 152 (354)
T ss_dssp EEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSCEEEEC
T ss_pred EEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCcEEEEE
Confidence 666543 1 11 11211 23568899999765553
No 306
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=93.32 E-value=1 Score=29.21 Aligned_cols=69 Identities=12% Similarity=0.007 Sum_probs=47.2
Q ss_pred eEEEcCCCCEEEEE-cCCCcEEEEEcCCC------CC-----c-EEEeeccCCeeEEEEccCCCEEEEeeCCCcEEEeeC
Q 045566 3 CSTWKDDGTTVFSG-GCDKQVKMWPLLSG------GQ-----P-VTVAMHDAPIKEVAWIPEMNLLATGSWDKTLKYWDT 69 (112)
Q Consensus 3 ~~~~~~~~~~l~~~-~~~~~v~~~~~~~~------~~-----~-~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~ 69 (112)
.+..+|+|++++.+ -.+.++.++++... +. . .....-.-.-...+|.++|....+..-|..|.-|++
T Consensus 327 Gv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e~GlGPlHt~Fd~~G~aYTtlfidSqvvkWni 406 (638)
T 3sbq_A 327 GCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPELGLGPLHTTFDGRGNAYTTLFIDSQVVKWNM 406 (638)
T ss_dssp CEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCBCCSCEEEEEECSSSEEEEEETTTTEEEEEEH
T ss_pred ceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeeccCCCcccEEEECCCCceEeeeeecceEEEEec
Confidence 57789999988665 56889999998631 11 0 111112234467889999966666668999999998
Q ss_pred CC
Q 045566 70 RQ 71 (112)
Q Consensus 70 ~~ 71 (112)
..
T Consensus 407 ~~ 408 (638)
T 3sbq_A 407 EE 408 (638)
T ss_dssp HH
T ss_pred cH
Confidence 54
No 307
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=93.17 E-value=0.66 Score=26.58 Aligned_cols=101 Identities=13% Similarity=0.157 Sum_probs=51.0
Q ss_pred CCCEEEEEcCC----CcEEEEEcCCCCCcEE--EeeccCCeeEEEEccCCCEEEEeeCC------CcEEEeeCCCCCceE
Q 045566 9 DGTTVFSGGCD----KQVKMWPLLSGGQPVT--VAMHDAPIKEVAWIPEMNLLATGSWD------KTLKYWDTRQPNPVH 76 (112)
Q Consensus 9 ~~~~l~~~~~~----~~v~~~~~~~~~~~~~--~~~~~~~v~~~~~~~~~~~~~~~~~~------~~i~~w~~~~~~~~~ 76 (112)
++..++.|+.+ ..+.+||+.+.+-... ++........+.+ ++..++.|+.+ ..+.+||+.+.+...
T Consensus 55 ~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~ 132 (306)
T 3ii7_A 55 DNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPPTPRDSLAACAA--EGKIYTSGGSEVGNSALYLFECYDTRTESWHT 132 (306)
T ss_dssp TTEEEEECCBSSSBCCEEEEEETTTTEEEEEECCSSCCBSCEEEEE--TTEEEEECCBBTTBSCCCCEEEEETTTTEEEE
T ss_pred CCEEEEEeCCCCCCcceEEEEeCCCCeEEECCCCCccccceeEEEE--CCEEEEECCCCCCCcEeeeEEEEeCCCCceEe
Confidence 45566666644 5677888765432111 1111111122222 56677777654 458888987765332
Q ss_pred EecCCC---eEEEEeeCCCEEEEEeC---------CCcEEEEECcCC
Q 045566 77 TQQLPD---RCYALTVRYPLMVVGTA---------DRNLVVFNLQNP 111 (112)
Q Consensus 77 ~~~~~~---~~~~~~~~~~~~~~~~~---------d~~v~~~d~~~~ 111 (112)
.-..+. .......++..++.|+. ...+.+||+.+.
T Consensus 133 ~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~ 179 (306)
T 3ii7_A 133 KPSMLTQRCSHGMVEANGLIYVCGGSLGNNVSGRVLNSCEVYDPATE 179 (306)
T ss_dssp ECCCSSCCBSCEEEEETTEEEEECCEESCTTTCEECCCEEEEETTTT
T ss_pred CCCCcCCcceeEEEEECCEEEEECCCCCCCCcccccceEEEeCCCCC
Confidence 221111 11122335666666653 344778887654
No 308
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=93.11 E-value=0.74 Score=26.96 Aligned_cols=107 Identities=6% Similarity=-0.128 Sum_probs=58.0
Q ss_pred eEEEcCCCCEEEEEc--CCCcEEEEEcCCCCCcEEE-eeccCCeeEEEEccCCC-EEEEeeCCCcEEEeeCCCCCceEEe
Q 045566 3 CSTWKDDGTTVFSGG--CDKQVKMWPLLSGGQPVTV-AMHDAPIKEVAWIPEMN-LLATGSWDKTLKYWDTRQPNPVHTQ 78 (112)
Q Consensus 3 ~~~~~~~~~~l~~~~--~~~~v~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~-~~~~~~~~~~i~~w~~~~~~~~~~~ 78 (112)
.++++|.+..|+... ..+.|...++.. .....+ ...-..-..+++++++. ++++=...+.|..+++.........
T Consensus 126 giavdp~~g~ly~td~~~~~~I~r~~~dG-~~~~~~~~~~l~~Pnglavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~ 204 (318)
T 3sov_A 126 AIALDPSSGFMYWTDWGEVPKIERAGMDG-SSRFIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAVV 204 (318)
T ss_dssp EEEEEGGGTEEEEEECSSSCEEEEEETTS-CSCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEE
T ss_pred EEEEeCCCCEEEEEecCCCCEEEEEEcCC-CCeEEEEECCCCCccEEEEeccCCEEEEEECCCCEEEEEcCCCCceEEEe
Confidence 567777555554443 356777777653 322222 22233457899998554 4455556778999998654332222
Q ss_pred cC---CCeEEEEeeCCCEEEEEeCCCcEEEEECcCC
Q 045566 79 QL---PDRCYALTVRYPLMVVGTADRNLVVFNLQNP 111 (112)
Q Consensus 79 ~~---~~~~~~~~~~~~~~~~~~~d~~v~~~d~~~~ 111 (112)
.. ....+++. .+..+.+-...+.|..+|..++
T Consensus 205 ~~~~~~P~glav~-~~~lywtd~~~~~V~~~~~~~G 239 (318)
T 3sov_A 205 KGSLPHPFALTLF-EDILYWTDWSTHSILACNKYTG 239 (318)
T ss_dssp CSCCSCEEEEEEE-TTEEEEEETTTTEEEEEETTTC
T ss_pred cCCCCCceEEEEe-CCEEEEEecCCCeEEEEECCCC
Confidence 21 11234442 2333444444567777776554
No 309
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=92.89 E-value=0.91 Score=27.38 Aligned_cols=71 Identities=10% Similarity=-0.061 Sum_probs=51.4
Q ss_pred eEEEcCCCCEEEEEcCCCcEEEEEcCCCCCcEEEeeccCCeeEEEEccCCCEEEEeeCCCcEEEeeCCCCC
Q 045566 3 CSTWKDDGTTVFSGGCDKQVKMWPLLSGGQPVTVAMHDAPIKEVAWIPEMNLLATGSWDKTLKYWDTRQPN 73 (112)
Q Consensus 3 ~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~ 73 (112)
++..++....+..-..-|.+++||+.++..+..-+-..+.|...+...+..-++....+|.|.--.+....
T Consensus 264 amqvs~kygviyviTK~G~ihlyDleTgt~i~~nrIS~d~iF~ta~~~~~~Gi~~Vnr~GqVl~v~v~~~~ 334 (365)
T 2xzh_A 264 AMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRISGETIFVTAPHEATAGIIGVNRKGQVLSVCVEEEN 334 (365)
T ss_dssp EEEEETTTTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEEEGGGTEEEEEETTCEEEEEEECTTT
T ss_pred EEEecccCCEEEEEeCCcEEEEEEcccCcEEEEeccCCCceEEecccCCCCcEEEEcCCCEEEEEEECccc
Confidence 45667766777777888999999999999987766666676655555554556666678877766665554
No 310
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=92.66 E-value=0.83 Score=26.36 Aligned_cols=101 Identities=6% Similarity=0.055 Sum_probs=50.2
Q ss_pred CCCEEEEEcC------CCcEEEEEcCCCCCc--EEEeeccCCeeEEEEccCCCEEEEeeCCC-----cEEEeeCCCCCce
Q 045566 9 DGTTVFSGGC------DKQVKMWPLLSGGQP--VTVAMHDAPIKEVAWIPEMNLLATGSWDK-----TLKYWDTRQPNPV 75 (112)
Q Consensus 9 ~~~~l~~~~~------~~~v~~~~~~~~~~~--~~~~~~~~~v~~~~~~~~~~~~~~~~~~~-----~i~~w~~~~~~~~ 75 (112)
+++.++.|+. -..+.+||+.+.+-. ..++........+.+ ++..++.|+.++ .+..||+.+.+-.
T Consensus 148 ~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~ 225 (315)
T 4asc_A 148 MDLVYVIGGKGSDRKCLNKMCVYDPKKFEWKELAPMQTARSLFGATVH--DGRIIVAAGVTDTGLTSSAEVYSITDNKWA 225 (315)
T ss_dssp TTEEEEECCBCTTSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEEEEECSSSEEEEEEEEETTTTEEE
T ss_pred CCEEEEEeCCCCCCcccceEEEEeCCCCeEEECCCCCCchhceEEEEE--CCEEEEEeccCCCCccceEEEEECCCCeEE
Confidence 4556666655 135778887654211 111111111122222 566777776543 4778888776433
Q ss_pred EEecCCC---eEEEEeeCCCEEEEEeCCC--------------cEEEEECcCC
Q 045566 76 HTQQLPD---RCYALTVRYPLMVVGTADR--------------NLVVFNLQNP 111 (112)
Q Consensus 76 ~~~~~~~---~~~~~~~~~~~~~~~~~d~--------------~v~~~d~~~~ 111 (112)
..-..+. ...+...++..++.|+.++ .+.+||+++.
T Consensus 226 ~~~~~p~~r~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~ 278 (315)
T 4asc_A 226 PFEAFPQERSSLSLVSLVGTLYAIGGFATLETESGELVPTELNDIWRYNEEEK 278 (315)
T ss_dssp EECCCSSCCBSCEEEEETTEEEEEEEEEEEECTTSCEEEEEEEEEEEEETTTT
T ss_pred ECCCCCCcccceeEEEECCEEEEECCccccCcCCccccccccCcEEEecCCCC
Confidence 2221111 1122234666777776532 3667887654
No 311
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=92.62 E-value=0.22 Score=33.80 Aligned_cols=35 Identities=11% Similarity=0.060 Sum_probs=28.3
Q ss_pred eeEEEcCCCCEEEEEcCCCcEEEEEcCCCCCcEEE
Q 045566 2 LCSTWKDDGTTVFSGGCDKQVKMWPLLSGGQPVTV 36 (112)
Q Consensus 2 ~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~ 36 (112)
.+++..++..++++-+.|+++++|++.+++.+.+.
T Consensus 239 ~~~~~~~~~~~lftl~~D~~LRiWsl~t~~~v~t~ 273 (950)
T 4gq2_M 239 ISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETI 273 (950)
T ss_dssp EEEEEETTTTEEEEEETTCEEEEEETTTTEEEEEE
T ss_pred EEEeecCCCcEEEEEECCCEEEEEECCCCCeEeee
Confidence 35666778889999999999999999888765543
No 312
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=92.25 E-value=0.95 Score=26.10 Aligned_cols=61 Identities=8% Similarity=0.021 Sum_probs=34.1
Q ss_pred CCCEEEEeeC------CCcEEEeeCCCCCceEEecCC--C-eEEEEeeCCCEEEEEeCCC-----cEEEEECcCC
Q 045566 51 EMNLLATGSW------DKTLKYWDTRQPNPVHTQQLP--D-RCYALTVRYPLMVVGTADR-----NLVVFNLQNP 111 (112)
Q Consensus 51 ~~~~~~~~~~------~~~i~~w~~~~~~~~~~~~~~--~-~~~~~~~~~~~~~~~~~d~-----~v~~~d~~~~ 111 (112)
++..++.|+. -..+..||+.+.+-......+ . ...+...++..++.|+.++ .+.+||+.+.
T Consensus 148 ~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~ 222 (315)
T 4asc_A 148 MDLVYVIGGKGSDRKCLNKMCVYDPKKFEWKELAPMQTARSLFGATVHDGRIIVAAGVTDTGLTSSAEVYSITDN 222 (315)
T ss_dssp TTEEEEECCBCTTSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEEEEECSSSEEEEEEEEETTTT
T ss_pred CCEEEEEeCCCCCCcccceEEEEeCCCCeEEECCCCCCchhceEEEEECCEEEEEeccCCCCccceEEEEECCCC
Confidence 5666777765 245888888766432211111 1 1122234667777777654 4777887654
No 313
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=92.11 E-value=1.2 Score=26.75 Aligned_cols=97 Identities=11% Similarity=-0.015 Sum_probs=56.3
Q ss_pred eeEEEcCCCCEEEEEcCCCcEEEEEcCCCCCcE--EE----eeccCCeeEEEEccC----CCEEEEee--CCCcEEEeeC
Q 045566 2 LCSTWKDDGTTVFSGGCDKQVKMWPLLSGGQPV--TV----AMHDAPIKEVAWIPE----MNLLATGS--WDKTLKYWDT 69 (112)
Q Consensus 2 ~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~--~~----~~~~~~v~~~~~~~~----~~~~~~~~--~~~~i~~w~~ 69 (112)
..++|.|+|+.+++--..+.|++++...++... .+ .........++++|+ +.+.++-+ .+..|.-+.+
T Consensus 35 ~~ia~~pdG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~~~~~v~R~~~ 114 (347)
T 3das_A 35 WGLAPLPGGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSASDNRIVRMLY 114 (347)
T ss_dssp EEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECSSSEEEEEEEB
T ss_pred eEEEEcCCCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEecCCCCEEEEEEe
Confidence 368999999988777668999988755443211 11 123456789999985 44444322 3344544554
Q ss_pred CCC----------Cce-EEecC----CCeEEEEeeCCCEEEEEe
Q 045566 70 RQP----------NPV-HTQQL----PDRCYALTVRYPLMVVGT 98 (112)
Q Consensus 70 ~~~----------~~~-~~~~~----~~~~~~~~~~~~~~~~~~ 98 (112)
... +.+ ..+.. ....+.|.+++.++++.+
T Consensus 115 ~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~Lyvt~G 158 (347)
T 3das_A 115 DEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKMLYAGTG 158 (347)
T ss_dssp CTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSCEEEECB
T ss_pred CCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCCCEEEEEC
Confidence 431 111 11211 224688999987666644
No 314
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=92.06 E-value=0.49 Score=32.16 Aligned_cols=37 Identities=27% Similarity=0.255 Sum_probs=30.8
Q ss_pred CeeEEEEccCCCEEEEeeCCCcEEEeeCCCCCceEEe
Q 045566 42 PIKEVAWIPEMNLLATGSWDKTLKYWDTRQPNPVHTQ 78 (112)
Q Consensus 42 ~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~ 78 (112)
.+.++...++..++++-+.|+.+++|++.+++++...
T Consensus 237 ~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~~v~t~ 273 (950)
T 4gq2_M 237 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETI 273 (950)
T ss_dssp CEEEEEEETTTTEEEEEETTCEEEEEETTTTEEEEEE
T ss_pred eEEEEeecCCCcEEEEEECCCEEEEEECCCCCeEeee
Confidence 4567777778889999999999999999998876554
No 315
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=91.92 E-value=0.23 Score=34.29 Aligned_cols=34 Identities=12% Similarity=0.034 Sum_probs=27.5
Q ss_pred eEEEcCCCCEEEEEcCCCcEEEEEcCCCCCcEEE
Q 045566 3 CSTWKDDGTTVFSGGCDKQVKMWPLLSGGQPVTV 36 (112)
Q Consensus 3 ~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~ 36 (112)
+++..++..++++-+.|+++++|++.+++.+.+.
T Consensus 242 s~~~~~~~~~lftL~~D~~LRiWsl~t~~~v~t~ 275 (1139)
T 4fhn_B 242 SMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETI 275 (1139)
T ss_dssp CCEEETTTTEEEEEBTTCEEEEEETTTTEEEEEE
T ss_pred EeeccCCccEEEEEeCCCEEEEEECCCCCeEEee
Confidence 4455667889999999999999999888766543
No 316
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=91.66 E-value=2.1 Score=28.72 Aligned_cols=110 Identities=9% Similarity=-0.132 Sum_probs=60.1
Q ss_pred eeEEEcCCCCEEEEEc-C-CCcEEEEEcCCCCCcEEEeeccCCeeEEEEccCCC-EEEEeeCCCcEEEeeCCCCCceEEe
Q 045566 2 LCSTWKDDGTTVFSGG-C-DKQVKMWPLLSGGQPVTVAMHDAPIKEVAWIPEMN-LLATGSWDKTLKYWDTRQPNPVHTQ 78 (112)
Q Consensus 2 ~~~~~~~~~~~l~~~~-~-~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~~~~~~~~~~i~~w~~~~~~~~~~~ 78 (112)
..++++|.+..|+... . .+.|...++........+.........|++++... ++++=...+.|...++.........
T Consensus 517 ~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~~~~lv~~~l~~P~GLavD~~~~~LYwaD~~~~~I~~~d~dG~~~~~v~ 596 (791)
T 3m0c_C 517 RAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTIL 596 (791)
T ss_dssp EEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEE
T ss_pred ceEEEecCCCCEEEecCCCCCeEEEEecCCCceEEEEeCCCCCceEEEEecCCCeEEEEeCCCCcEEEEecCCCceEEEe
Confidence 3578888655554443 2 36777777653333223333334568899997544 4444445677888888655433332
Q ss_pred cC---CCeEEEEeeCCCEEEEEe-CCCcEEEEECcCC
Q 045566 79 QL---PDRCYALTVRYPLMVVGT-ADRNLVVFNLQNP 111 (112)
Q Consensus 79 ~~---~~~~~~~~~~~~~~~~~~-~d~~v~~~d~~~~ 111 (112)
.. -...+.+...+..|+... ..+.|...|..++
T Consensus 597 ~~~~~l~~P~glav~~~~lYwtD~~~~~I~~~dk~tG 633 (791)
T 3m0c_C 597 EDEKRLAHPFSLAVFEDKVFWTDIINEAIFSANRLTG 633 (791)
T ss_dssp ECTTTTSSEEEEEEETTEEEEEETTTTEEEEEETTTC
T ss_pred cCCCccCCCCEEEEeCCEEEEEECCCCEEEEEeCCCC
Confidence 21 112334444444555554 3456666665443
No 317
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=91.60 E-value=1.2 Score=25.69 Aligned_cols=101 Identities=11% Similarity=0.150 Sum_probs=50.0
Q ss_pred CCCEEEEEcCC-----CcEEEEEcCCCCCcE--EEeeccCCeeEEEEccCCCEEEEeeCC-----CcEEEeeCCCCCceE
Q 045566 9 DGTTVFSGGCD-----KQVKMWPLLSGGQPV--TVAMHDAPIKEVAWIPEMNLLATGSWD-----KTLKYWDTRQPNPVH 76 (112)
Q Consensus 9 ~~~~l~~~~~~-----~~v~~~~~~~~~~~~--~~~~~~~~v~~~~~~~~~~~~~~~~~~-----~~i~~w~~~~~~~~~ 76 (112)
+++.++.|+.+ ..+.+||+.+.+-.. .++........+.+ ++..++.|+.+ ..+..||+.+.+-..
T Consensus 121 ~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~ 198 (308)
T 1zgk_A 121 DGHIYAVGGSHGCIHHNSVERYEPERDEWHLVAPMLTRRIGVGVAVL--NRLLYAVGGFDGTNRLNSAECYYPERNEWRM 198 (308)
T ss_dssp TTEEEEECCEETTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEECCBCSSCBCCCEEEEETTTTEEEE
T ss_pred CCEEEEEcCCCCCcccccEEEECCCCCeEeECCCCCccccceEEEEE--CCEEEEEeCCCCCCcCceEEEEeCCCCeEee
Confidence 45556666533 357778876443111 11111111122222 56677776654 458888887654322
Q ss_pred EecCC--C-eEEEEeeCCCEEEEEeCC-----CcEEEEECcCC
Q 045566 77 TQQLP--D-RCYALTVRYPLMVVGTAD-----RNLVVFNLQNP 111 (112)
Q Consensus 77 ~~~~~--~-~~~~~~~~~~~~~~~~~d-----~~v~~~d~~~~ 111 (112)
.-..+ . ...+...++.+++.|+.+ ..+.+||+.+.
T Consensus 199 ~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~ 241 (308)
T 1zgk_A 199 ITAMNTIRSGAGVCVLHNCIYAAGGYDGQDQLNSVERYDVETE 241 (308)
T ss_dssp CCCCSSCCBSCEEEEETTEEEEECCBCSSSBCCCEEEEETTTT
T ss_pred CCCCCCccccceEEEECCEEEEEeCCCCCCccceEEEEeCCCC
Confidence 11111 1 111222366666777654 45888887764
No 318
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=91.50 E-value=1.3 Score=26.27 Aligned_cols=95 Identities=12% Similarity=0.071 Sum_probs=51.3
Q ss_pred eeEEEcCCCC-EEEEEcCCCcEEEEEcCCC--CCcEEE----eeccCCeeEEEEccC----CCEEEEeeC-------CCc
Q 045566 2 LCSTWKDDGT-TVFSGGCDKQVKMWPLLSG--GQPVTV----AMHDAPIKEVAWIPE----MNLLATGSW-------DKT 63 (112)
Q Consensus 2 ~~~~~~~~~~-~l~~~~~~~~v~~~~~~~~--~~~~~~----~~~~~~v~~~~~~~~----~~~~~~~~~-------~~~ 63 (112)
..++|.|+|+ .++ +...+.|++++.... +....+ .........++++|+ +.+.++-.. ...
T Consensus 21 ~~i~~~pdG~~l~V-~e~~G~i~~~~~~g~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~~~~~~~~g~~~~~ 99 (353)
T 2g8s_A 21 WALAFLPDNHGMLI-TLRGGELRHWQAGKGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSYSEVGDDGKAGTA 99 (353)
T ss_dssp EEEEECSTTCCEEE-EETTTEEEEEETTTEECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEEEEEECSSSCEEEE
T ss_pred EEEEEcCCCCEEEE-EeCCceEEEEeCCCceeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEEEeCCCCCCCceeE
Confidence 4689999998 554 455789998874321 111111 112345689999995 544444322 224
Q ss_pred EEEeeCCCCC-------ceE-Eec------CCCeEEEEeeCCCEEEEE
Q 045566 64 LKYWDTRQPN-------PVH-TQQ------LPDRCYALTVRYPLMVVG 97 (112)
Q Consensus 64 i~~w~~~~~~-------~~~-~~~------~~~~~~~~~~~~~~~~~~ 97 (112)
|.-+++.... .+. ... .....+.|.|++.++++.
T Consensus 100 v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~ 147 (353)
T 2g8s_A 100 VGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDGKGYLFIAL 147 (353)
T ss_dssp EEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECSSSEEEEEE
T ss_pred EEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECCCCcEEEEE
Confidence 5555554321 111 111 112468999999555544
No 319
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=91.42 E-value=1.2 Score=25.44 Aligned_cols=101 Identities=13% Similarity=0.176 Sum_probs=51.7
Q ss_pred CCCEEEEEcCC-----CcEEEEEcCCCCCcE--EEeeccCCeeEEEEccCCCEEEEeeCC-----CcEEEeeCCCCCceE
Q 045566 9 DGTTVFSGGCD-----KQVKMWPLLSGGQPV--TVAMHDAPIKEVAWIPEMNLLATGSWD-----KTLKYWDTRQPNPVH 76 (112)
Q Consensus 9 ~~~~l~~~~~~-----~~v~~~~~~~~~~~~--~~~~~~~~v~~~~~~~~~~~~~~~~~~-----~~i~~w~~~~~~~~~ 76 (112)
+++.++.|+.+ ..+.+||+.+.+-.. ..+........+.+ ++..++.|+.+ ..+..||+.+.+-..
T Consensus 112 ~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~ 189 (301)
T 2vpj_A 112 GDMIYVSGGFDGSRRHTSMERYDPNIDQWSMLGDMQTAREGAGLVVA--SGVIYCLGGYDGLNILNSVEKYDPHTGHWTN 189 (301)
T ss_dssp TTEEEEECCBCSSCBCCEEEEEETTTTEEEEEEECSSCCBSCEEEEE--TTEEEEECCBCSSCBCCCEEEEETTTTEEEE
T ss_pred CCEEEEEcccCCCcccceEEEEcCCCCeEEECCCCCCCcccceEEEE--CCEEEEECCCCCCcccceEEEEeCCCCcEEe
Confidence 45566666543 357788876543211 11111111122222 56677777654 458888887765332
Q ss_pred EecCCC---eEEEEeeCCCEEEEEeCC-----CcEEEEECcCC
Q 045566 77 TQQLPD---RCYALTVRYPLMVVGTAD-----RNLVVFNLQNP 111 (112)
Q Consensus 77 ~~~~~~---~~~~~~~~~~~~~~~~~d-----~~v~~~d~~~~ 111 (112)
.-..+. ...+...++..++.|+.+ ..+.+||+++.
T Consensus 190 ~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~ 232 (301)
T 2vpj_A 190 VTPMATKRSGAGVALLNDHIYVVGGFDGTAHLSSVEAYNIRTD 232 (301)
T ss_dssp ECCCSSCCBSCEEEEETTEEEEECCBCSSSBCCCEEEEETTTT
T ss_pred CCCCCcccccceEEEECCEEEEEeCCCCCcccceEEEEeCCCC
Confidence 211111 112223356666777654 45888888764
No 320
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=91.39 E-value=1.4 Score=26.42 Aligned_cols=96 Identities=6% Similarity=-0.089 Sum_probs=55.5
Q ss_pred eeEEEcCCCCEEEEEcC-----------------CCcEEEEEcCCCCCcEEEeeccCCeeEEEEccCCCEEEEe-eCCCc
Q 045566 2 LCSTWKDDGTTVFSGGC-----------------DKQVKMWPLLSGGQPVTVAMHDAPIKEVAWIPEMNLLATG-SWDKT 63 (112)
Q Consensus 2 ~~~~~~~~~~~l~~~~~-----------------~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~-~~~~~ 63 (112)
+.+.+.++|++.++... .+.|..++. + ....+...-..-+.++|+|+++.+..+ +..+.
T Consensus 168 ND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~--~-~~~~~~~~l~~pNGia~spDg~~lYvadt~~~~ 244 (355)
T 3sre_A 168 NDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSP--N-DVRVVAEGFDFANGINISPDGKYVYIAELLAHK 244 (355)
T ss_dssp EEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEECT--T-CCEEEEEEESSEEEEEECTTSSEEEEEEGGGTE
T ss_pred ceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEEEEEC--C-eEEEeecCCcccCcceECCCCCEEEEEeCCCCe
Confidence 45677788887766541 234444443 3 233333334456899999999876555 45788
Q ss_pred EEEeeCCCCCce---EEecCC--CeEEEEee-CCCEEEEEeCC
Q 045566 64 LKYWDTRQPNPV---HTQQLP--DRCYALTV-RYPLMVVGTAD 100 (112)
Q Consensus 64 i~~w~~~~~~~~---~~~~~~--~~~~~~~~-~~~~~~~~~~d 100 (112)
|..|++.....+ ..+..+ ...++++. +|++.+++..+
T Consensus 245 I~~~~~~~~g~l~~~~~~~~~g~PDGi~vD~e~G~lwva~~~~ 287 (355)
T 3sre_A 245 IHVYEKHANWTLTPLRVLSFDTLVDNISVDPVTGDLWVGCHPN 287 (355)
T ss_dssp EEEEEECTTSCEEEEEEEECSSEEEEEEECTTTCCEEEEEESC
T ss_pred EEEEEECCCCcEecCEEEeCCCCCceEEEeCCCCcEEEEecCC
Confidence 999998643222 122222 24567777 47766655433
No 321
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=90.93 E-value=1.3 Score=25.24 Aligned_cols=101 Identities=16% Similarity=0.190 Sum_probs=49.4
Q ss_pred CCCEEEEEcCCC-----cEEEEEcCCCCCcEE--EeeccCCeeEEEEccCCCEEEEeeCC-------CcEEEeeCCCCCc
Q 045566 9 DGTTVFSGGCDK-----QVKMWPLLSGGQPVT--VAMHDAPIKEVAWIPEMNLLATGSWD-------KTLKYWDTRQPNP 74 (112)
Q Consensus 9 ~~~~l~~~~~~~-----~v~~~~~~~~~~~~~--~~~~~~~v~~~~~~~~~~~~~~~~~~-------~~i~~w~~~~~~~ 74 (112)
++..++.|+.++ .+.+||+.+.+-... ++........+.+ ++..++.|+.+ ..+..||+.+.+-
T Consensus 108 ~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W 185 (302)
T 2xn4_A 108 NGLLYAVGGFDGSTGLSSVEAYNIKSNEWFHVAPMNTRRSSVGVGVV--GGLLYAVGGYDVASRQCLSTVECYNATTNEW 185 (302)
T ss_dssp TTEEEEEEEECSSCEEEEEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCEETTTTEECCCEEEEETTTTEE
T ss_pred CCEEEEEcCCCCCccCceEEEEeCCCCeEeecCCCCCcccCceEEEE--CCEEEEEeCCCCCCCccccEEEEEeCCCCcE
Confidence 455566665442 466777654432111 1111111112222 56666666542 3578888877643
Q ss_pred eEEecCC--C-eEEEEeeCCCEEEEEeCC-----CcEEEEECcCC
Q 045566 75 VHTQQLP--D-RCYALTVRYPLMVVGTAD-----RNLVVFNLQNP 111 (112)
Q Consensus 75 ~~~~~~~--~-~~~~~~~~~~~~~~~~~d-----~~v~~~d~~~~ 111 (112)
...-..+ . .......++.+++.|+.+ ..+.+||+.+.
T Consensus 186 ~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~ 230 (302)
T 2xn4_A 186 TYIAEMSTRRSGAGVGVLNNLLYAVGGHDGPLVRKSVEVYDPTTN 230 (302)
T ss_dssp EEECCCSSCCBSCEEEEETTEEEEECCBSSSSBCCCEEEEETTTT
T ss_pred EECCCCccccccccEEEECCEEEEECCCCCCcccceEEEEeCCCC
Confidence 3221111 1 112223356667777654 35888887754
No 322
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=90.46 E-value=2.2 Score=26.91 Aligned_cols=71 Identities=10% Similarity=-0.061 Sum_probs=52.6
Q ss_pred eEEEcCCCCEEEEEcCCCcEEEEEcCCCCCcEEEeeccCCeeEEEEccCCCEEEEeeCCCcEEEeeCCCCC
Q 045566 3 CSTWKDDGTTVFSGGCDKQVKMWPLLSGGQPVTVAMHDAPIKEVAWIPEMNLLATGSWDKTLKYWDTRQPN 73 (112)
Q Consensus 3 ~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~ 73 (112)
++..++....+..-..-|.+++||+.++..+..-+-....|...+......-++....+|.|.--.+....
T Consensus 263 amqvs~kygviyviTK~G~i~lyDleTgt~i~~nrIs~~~iF~t~~~~~~~Gi~~Vnr~GqVl~v~v~e~~ 333 (494)
T 1bpo_A 263 AMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRISGETIFVTAPHEATAGIIGVNRKGQVLSVCVEEEN 333 (494)
T ss_dssp EEEEETTTTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEEETTTTEEEEEETTCEEEEEEECTTT
T ss_pred EEEecccCCEEEEEecCceEEEEecccceeeeeecccCCceEEecccCCCCcEEEEccCceEEEEEEcccc
Confidence 46667777777778888999999999999987766666677666666555566667788887776665544
No 323
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=90.26 E-value=1.6 Score=25.07 Aligned_cols=101 Identities=10% Similarity=0.116 Sum_probs=51.0
Q ss_pred CCCEEEEEcCC-----CcEEEEEcCCCCCc--EEEeeccCCeeEEEEccCCCEEEEeeCC-----CcEEEeeCCCCCceE
Q 045566 9 DGTTVFSGGCD-----KQVKMWPLLSGGQP--VTVAMHDAPIKEVAWIPEMNLLATGSWD-----KTLKYWDTRQPNPVH 76 (112)
Q Consensus 9 ~~~~l~~~~~~-----~~v~~~~~~~~~~~--~~~~~~~~~v~~~~~~~~~~~~~~~~~~-----~~i~~w~~~~~~~~~ 76 (112)
+++.++.|+.+ ..+..||+.+.+-. ..++........+.+ ++..++.|+.+ ..+.+||+.+.+...
T Consensus 168 ~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~ 245 (308)
T 1zgk_A 168 NRLLYAVGGFDGTNRLNSAECYYPERNEWRMITAMNTIRSGAGVCVL--HNCIYAAGGYDGQDQLNSVERYDVETETWTF 245 (308)
T ss_dssp TTEEEEECCBCSSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEECCBCSSSBCCCEEEEETTTTEEEE
T ss_pred CCEEEEEeCCCCCCcCceEEEEeCCCCeEeeCCCCCCccccceEEEE--CCEEEEEeCCCCCCccceEEEEeCCCCcEEE
Confidence 45566666543 45778887544211 111111111122222 56677777654 568889987764332
Q ss_pred EecCCC---eEEEEeeCCCEEEEEeCC-----CcEEEEECcCC
Q 045566 77 TQQLPD---RCYALTVRYPLMVVGTAD-----RNLVVFNLQNP 111 (112)
Q Consensus 77 ~~~~~~---~~~~~~~~~~~~~~~~~d-----~~v~~~d~~~~ 111 (112)
.-..+. .......++.+++.|+.+ ..+.+||+.+.
T Consensus 246 ~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~ 288 (308)
T 1zgk_A 246 VAPMKHRRSALGITVHQGRIYVLGGYDGHTFLDSVECYDPDTD 288 (308)
T ss_dssp CCCCSSCCBSCEEEEETTEEEEECCBCSSCBCCEEEEEETTTT
T ss_pred CCCCCCCccceEEEEECCEEEEEcCcCCCcccceEEEEcCCCC
Confidence 211111 111222356667777654 34778887754
No 324
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=90.14 E-value=2.6 Score=27.34 Aligned_cols=107 Identities=8% Similarity=-0.106 Sum_probs=62.0
Q ss_pred eeEEEcCCCCEE-EEEcCCCcEEEEEcCCCCCcEEEeeccCCeeEEEEccC-CCEEEEeeCCCcEEEeeCCCCCceEEec
Q 045566 2 LCSTWKDDGTTV-FSGGCDKQVKMWPLLSGGQPVTVAMHDAPIKEVAWIPE-MNLLATGSWDKTLKYWDTRQPNPVHTQQ 79 (112)
Q Consensus 2 ~~~~~~~~~~~l-~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~~~~~~~~~~i~~w~~~~~~~~~~~~ 79 (112)
..++|++.+..+ ++-..++.|..+++........+.........+++.+. +.++++-...+.|.+.++..........
T Consensus 40 ~~l~~d~~~~~lywtD~~~~~I~r~~~~g~~~~~v~~~g~~~P~GlAvD~~~~~LY~tD~~~~~I~v~~~dG~~~~~l~~ 119 (628)
T 4a0p_A 40 SALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVEFGLDYPEGMAVDWLGKNLYWADTGTNRIEVSKLDGQHRQVLVW 119 (628)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSTTCEEEEC
T ss_pred EEEEEECCCCEEEEEECCCCeEEEEECCCCCcEEEEeCCCCCcceEEEEeCCCEEEEEECCCCEEEEEecCCCcEEEEEe
Confidence 367888855544 45556788888887644332233322234578888874 4555665667889999886544322221
Q ss_pred C---CCeEEEEeeCCCEEEEEeC--CCcEEEEEC
Q 045566 80 L---PDRCYALTVRYPLMVVGTA--DRNLVVFNL 108 (112)
Q Consensus 80 ~---~~~~~~~~~~~~~~~~~~~--d~~v~~~d~ 108 (112)
. ....++++|....++.... .+.|...++
T Consensus 120 ~~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~ 153 (628)
T 4a0p_A 120 KDLDSPRALALDPAEGFMYWTEWGGKPKIDRAAM 153 (628)
T ss_dssp SSCCCEEEEEEETTTTEEEEEECSSSCEEEEEET
T ss_pred CCCCCcccEEEccCCCeEEEeCCCCCCEEEEEeC
Confidence 1 2356788875555555542 345555544
No 325
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=90.07 E-value=1.7 Score=25.07 Aligned_cols=61 Identities=7% Similarity=0.113 Sum_probs=33.3
Q ss_pred CCCEEEEeeC------CCcEEEeeCCCCCceEEecCCC---eEEEEeeCCCEEEEEeCC-----CcEEEEECcCC
Q 045566 51 EMNLLATGSW------DKTLKYWDTRQPNPVHTQQLPD---RCYALTVRYPLMVVGTAD-----RNLVVFNLQNP 111 (112)
Q Consensus 51 ~~~~~~~~~~------~~~i~~w~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~d-----~~v~~~d~~~~ 111 (112)
++..++.|+. ...+..+|+.+.+-...-..+. ...+...++..++.|+.+ ..+.+||+.+.
T Consensus 158 ~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~ 232 (318)
T 2woz_A 158 NGMIYCLGGKTDDKKCTNRVFIYNPKKGDWKDLAPMKTPRSMFGVAIHKGKIVIAGGVTEDGLSASVEAFDLKTN 232 (318)
T ss_dssp TTEEEEECCEESSSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEEEEEETTEEEEEEEEEETTTC
T ss_pred CCEEEEEcCCCCCCCccceEEEEcCCCCEEEECCCCCCCcccceEEEECCEEEEEcCcCCCCccceEEEEECCCC
Confidence 5666666653 2458888987765332211111 112223466667777653 24667887664
No 326
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=89.51 E-value=2 Score=25.10 Aligned_cols=65 Identities=9% Similarity=0.064 Sum_probs=36.9
Q ss_pred eeEEEcCCCCEEEEEcCCCcEEEEEcCCCCCcEEE-eeccCCeeEEEEccCCCEEEEeeCCCcEEEee
Q 045566 2 LCSTWKDDGTTVFSGGCDKQVKMWPLLSGGQPVTV-AMHDAPIKEVAWIPEMNLLATGSWDKTLKYWD 68 (112)
Q Consensus 2 ~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~ 68 (112)
..+.+.+++..++.+......+-.|. .++.-..+ ......+..+.+.+++..++. +.++.++..+
T Consensus 166 ~~~~~~~~~~~~~~g~~G~~~~S~d~-gG~tW~~~~~~~~~~~~~~~~~~~g~~~~~-~~~G~~~~s~ 231 (327)
T 2xbg_A 166 RNLNRSPSGEYVAVSSRGSFYSTWEP-GQTAWEPHNRTTSRRLHNMGFTPDGRLWMI-VNGGKIAFSD 231 (327)
T ss_dssp EEEEECTTSCEEEEETTSSEEEEECT-TCSSCEEEECCSSSCEEEEEECTTSCEEEE-ETTTEEEEEE
T ss_pred EEEEEcCCCcEEEEECCCcEEEEeCC-CCCceeECCCCCCCccceeEECCCCCEEEE-eCCceEEEec
Confidence 45678888887776654333333331 12222222 223456788888888876654 4567666653
No 327
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=89.43 E-value=0.5 Score=32.75 Aligned_cols=37 Identities=27% Similarity=0.255 Sum_probs=29.1
Q ss_pred CeeEEEEccCCCEEEEeeCCCcEEEeeCCCCCceEEe
Q 045566 42 PIKEVAWIPEMNLLATGSWDKTLKYWDTRQPNPVHTQ 78 (112)
Q Consensus 42 ~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~ 78 (112)
.+.+++..++..++++-+.|+.+++|++.+++++...
T Consensus 239 ~~vs~~~~~~~~~lftL~~D~~LRiWsl~t~~~v~t~ 275 (1139)
T 4fhn_B 239 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETI 275 (1139)
T ss_dssp CBSCCEEETTTTEEEEEBTTCEEEEEETTTTEEEEEE
T ss_pred eeEEeeccCCccEEEEEeCCCEEEEEECCCCCeEEee
Confidence 3445556667789999999999999999988766553
No 328
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=89.36 E-value=1.9 Score=24.47 Aligned_cols=95 Identities=8% Similarity=-0.108 Sum_probs=55.6
Q ss_pred CCCEEEEEcCCCcEEEEEcCCCCC-----cEEEeec--cCCeeEEEEccCCCEEEEeeCCCcEEEeeCCCCCce------
Q 045566 9 DGTTVFSGGCDKQVKMWPLLSGGQ-----PVTVAMH--DAPIKEVAWIPEMNLLATGSWDKTLKYWDTRQPNPV------ 75 (112)
Q Consensus 9 ~~~~l~~~~~~~~v~~~~~~~~~~-----~~~~~~~--~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~------ 75 (112)
....|+...+| +++.=..+.... ..+..+. =..+..++|+|++.+.+. .++.+.-.+..+....
T Consensus 3 ~~~~l~~v~~d-~~y~G~~P~~~~~~~~~~a~~iG~~gw~~~~~laf~P~G~LYaV--~~G~Ly~~~~~t~~~~~W~~s~ 79 (236)
T 1tl2_A 3 GESMLRGVYQD-KFYQGTYPQNKNDNWLARATLIGKGGWSNFKFLFLSPGGELYGV--LNDKIYKGTPPTHDNDNWMGRA 79 (236)
T ss_dssp CCCCEEEEETT-EEEEESCCCSTTCCHHHHSEEEESSSCTTCSEEEECTTSCEEEE--ETTEEEEESCCCSTTCCHHHHC
T ss_pred cceEEEEEeCC-cEEecCCCCCcccchhhhccccCccccccceeEEECCCccEEEE--eCCeEEEECCCCCCcccccccc
Confidence 34556666777 665555444431 1122222 247789999999987766 6676666665442211
Q ss_pred EEe-cCC---CeEEEEeeCCCEEEEEeCCCcEEEEEC
Q 045566 76 HTQ-QLP---DRCYALTVRYPLMVVGTADRNLVVFNL 108 (112)
Q Consensus 76 ~~~-~~~---~~~~~~~~~~~~~~~~~~d~~v~~~d~ 108 (112)
..+ ... -..+.|++++.+.++ .||.|+-++-
T Consensus 80 t~IG~~Gw~~F~a~~fD~~G~LYav--~dG~iyr~~p 114 (236)
T 1tl2_A 80 KKIGNGGWNQFQFLFFDPNGYLYAV--SKDKLYKASP 114 (236)
T ss_dssp EEEECSCGGGCSEEEECTTSCEEEE--ETTEEEEESC
T ss_pred cEecccccccceEEEECCCCCEEEe--CCCEEEEeCC
Confidence 111 001 257788999987776 5688876653
No 329
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=89.21 E-value=3.2 Score=26.94 Aligned_cols=56 Identities=13% Similarity=0.112 Sum_probs=35.8
Q ss_pred eEEEcCCCCEEEEEcCC------------CcEEEEEcCCCCCcEEEee-ccCCeeEEEEccCCCEEEEe
Q 045566 3 CSTWKDDGTTVFSGGCD------------KQVKMWPLLSGGQPVTVAM-HDAPIKEVAWIPEMNLLATG 58 (112)
Q Consensus 3 ~~~~~~~~~~l~~~~~~------------~~v~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~~~ 58 (112)
.++|+|.|++++.-..+ ..+.+.+..+++..+.+.. ..+.++.+.|+|+++.|+..
T Consensus 480 NL~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P~gaE~TG~~fspDg~tlfvn 548 (592)
T 3zwu_A 480 GLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp EEEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEE
T ss_pred ceEECCCCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCCCCccCcCeeECCCCCEEEEE
Confidence 47899999977665432 2345555555554433332 45789999999998876543
No 330
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=88.96 E-value=2.3 Score=24.90 Aligned_cols=101 Identities=6% Similarity=-0.073 Sum_probs=53.0
Q ss_pred eEEEcCCCCEEEEEcCCCcEEEEEcCCCCCcEEEe----eccCCeeEEEEccCCCEEEEeeCCCcEEEeeCCCCCceEEe
Q 045566 3 CSTWKDDGTTVFSGGCDKQVKMWPLLSGGQPVTVA----MHDAPIKEVAWIPEMNLLATGSWDKTLKYWDTRQPNPVHTQ 78 (112)
Q Consensus 3 ~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~~----~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~ 78 (112)
.+.+.++++.++. +.++.+.+.+...++.-..+. .....+..+.+.+++..++.+. ++.+. +....++.-...
T Consensus 209 ~~~~~~~g~~~~~-~~~G~~~~s~~D~G~tW~~~~~~~~~~~~~~~~v~~~~~~~~~~~g~-~g~i~-~S~DgG~tW~~~ 285 (327)
T 2xbg_A 209 NMGFTPDGRLWMI-VNGGKIAFSDPDNSENWGELLSPLRRNSVGFLDLAYRTPNEVWLAGG-AGALL-CSQDGGQTWQQD 285 (327)
T ss_dssp EEEECTTSCEEEE-ETTTEEEEEETTEEEEECCCBCTTSSCCSCEEEEEESSSSCEEEEES-TTCEE-EESSTTSSCEEC
T ss_pred eeEECCCCCEEEE-eCCceEEEecCCCCCeeEeccCCcccCCcceEEEEecCCCEEEEEeC-CCeEE-EeCCCCcccEEc
Confidence 4566777766544 446766665311111111111 1123578888988777666554 66553 333333322212
Q ss_pred ------cCCCeEEEEeeCCCEEEEEeCCCcEEEEE
Q 045566 79 ------QLPDRCYALTVRYPLMVVGTADRNLVVFN 107 (112)
Q Consensus 79 ------~~~~~~~~~~~~~~~~~~~~~d~~v~~~d 107 (112)
......+.+..+ ..+++++.+|.|.-++
T Consensus 286 ~~~~~~~~~~~~v~~~~~-~~~~~~G~~G~i~~~~ 319 (327)
T 2xbg_A 286 VDVKKVPSNFYKILFFSP-DQGFILGQKGILLRYV 319 (327)
T ss_dssp GGGTTSSSCCCEEEEEET-TEEEEECSTTEEEEEC
T ss_pred CccCCCCCCeEEEEEECC-CceEEEcCCceEEEEc
Confidence 123455666544 4567777888776654
No 331
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=88.75 E-value=2.2 Score=24.43 Aligned_cols=99 Identities=7% Similarity=-0.023 Sum_probs=51.1
Q ss_pred CEEEEEcC--CCcEEEEEcCCCCCc--EEEeeccCCeeEEEEccCCCEEEEeeCC----CcEEEeeCCCCCceEEecCCC
Q 045566 11 TTVFSGGC--DKQVKMWPLLSGGQP--VTVAMHDAPIKEVAWIPEMNLLATGSWD----KTLKYWDTRQPNPVHTQQLPD 82 (112)
Q Consensus 11 ~~l~~~~~--~~~v~~~~~~~~~~~--~~~~~~~~~v~~~~~~~~~~~~~~~~~~----~~i~~w~~~~~~~~~~~~~~~ 82 (112)
..++.|+. ...+..||..+.+-. ..++........+. .++..++.|+.+ ..+..+|+.+.+.......+.
T Consensus 13 ~l~~~GG~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~--~~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~ 90 (306)
T 3ii7_A 13 YRIALFGGSQPQSCRYFNPKDYSWTDIRCPFEKRRDAACVF--WDNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPPT 90 (306)
T ss_dssp EEEEEECCSSTTSEEEEETTTTEEEECCCCSCCCBSCEEEE--ETTEEEEECCBSSSBCCEEEEEETTTTEEEEEECCSS
T ss_pred eEEEEeCCCCCceEEEecCCCCCEecCCCCCcccceeEEEE--ECCEEEEEeCCCCCCcceEEEEeCCCCeEEECCCCCc
Confidence 35556654 356888887654321 11111111212222 256677777654 567888887765333222211
Q ss_pred ---eEEEEeeCCCEEEEEeCC------CcEEEEECcCC
Q 045566 83 ---RCYALTVRYPLMVVGTAD------RNLVVFNLQNP 111 (112)
Q Consensus 83 ---~~~~~~~~~~~~~~~~~d------~~v~~~d~~~~ 111 (112)
.......++..++.|+.+ ..+.+||+.+.
T Consensus 91 ~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~~~ 128 (306)
T 3ii7_A 91 PRDSLAACAAEGKIYTSGGSEVGNSALYLFECYDTRTE 128 (306)
T ss_dssp CCBSCEEEEETTEEEEECCBBTTBSCCCCEEEEETTTT
T ss_pred cccceeEEEECCEEEEECCCCCCCcEeeeEEEEeCCCC
Confidence 112223356666777654 45788887654
No 332
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=88.69 E-value=4.3 Score=29.68 Aligned_cols=86 Identities=12% Similarity=0.185 Sum_probs=55.2
Q ss_pred CCcEEEEEcCCCCCcEEEeeccCCeeEEEEccCCCEEEEeeCCCcEEEeeCCCCCceEEecCCCeEEEEeeC-CCEEEEE
Q 045566 19 DKQVKMWPLLSGGQPVTVAMHDAPIKEVAWIPEMNLLATGSWDKTLKYWDTRQPNPVHTQQLPDRCYALTVR-YPLMVVG 97 (112)
Q Consensus 19 ~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 97 (112)
..+|.+-|+..+..+...+. .--+..++|..+.++.- ..+.+.++++.+...+..+..+....-|.|- .+.++..
T Consensus 47 ~~~vvIidl~~~~~~~rrpi---~AdsAIMnP~~~iiALr-ag~~lQiFnl~~k~klks~~~~e~VvfWkWis~~~l~lV 122 (1630)
T 1xi4_A 47 QAQVVIIDMNDPSNPIRRPI---SADSAIMNPASKVIALK-AGKTLQIFNIEMKSKMKAHTMTDDVTFWKWISLNTVALV 122 (1630)
T ss_pred CceEEEEECCCCCCcccccc---cchhhccCCCcceEEEe-cCCeEEEeehHHhhhhcccccCCCceEEEecCCCeeEEE
Confidence 34788888877665432211 11234467877666554 3788999999999888888776666666653 3333333
Q ss_pred eCCCcEEEEECc
Q 045566 98 TADRNLVVFNLQ 109 (112)
Q Consensus 98 ~~d~~v~~~d~~ 109 (112)
.+..|+.|++.
T Consensus 123 -T~~aVyHW~~~ 133 (1630)
T 1xi4_A 123 -TDNAVYHWSME 133 (1630)
T ss_pred -cCCeEEEeccC
Confidence 35579999884
No 333
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=88.61 E-value=2.3 Score=24.55 Aligned_cols=101 Identities=10% Similarity=0.145 Sum_probs=49.7
Q ss_pred CCCEEEEEcC------CCcEEEEEcCCCCCcEE--EeeccCCeeEEEEccCCCEEEEeeCC-----CcEEEeeCCCCCce
Q 045566 9 DGTTVFSGGC------DKQVKMWPLLSGGQPVT--VAMHDAPIKEVAWIPEMNLLATGSWD-----KTLKYWDTRQPNPV 75 (112)
Q Consensus 9 ~~~~l~~~~~------~~~v~~~~~~~~~~~~~--~~~~~~~v~~~~~~~~~~~~~~~~~~-----~~i~~w~~~~~~~~ 75 (112)
+++.++.|+. ...+.+||+.+.+-... .+........+.+ ++..++.|+.+ ..+.+||+.+.+-.
T Consensus 158 ~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~ 235 (318)
T 2woz_A 158 NGMIYCLGGKTDDKKCTNRVFIYNPKKGDWKDLAPMKTPRSMFGVAIH--KGKIVIAGGVTEDGLSASVEAFDLKTNKWE 235 (318)
T ss_dssp TTEEEEECCEESSSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEEEEEETTEEEEEEEEEETTTCCEE
T ss_pred CCEEEEEcCCCCCCCccceEEEEcCCCCEEEECCCCCCCcccceEEEE--CCEEEEEcCcCCCCccceEEEEECCCCeEE
Confidence 4555566653 23578888765432111 1111111122222 56666666543 34667888776533
Q ss_pred EEecCCC---eEEEEeeCCCEEEEEeCC--------------CcEEEEECcCC
Q 045566 76 HTQQLPD---RCYALTVRYPLMVVGTAD--------------RNLVVFNLQNP 111 (112)
Q Consensus 76 ~~~~~~~---~~~~~~~~~~~~~~~~~d--------------~~v~~~d~~~~ 111 (112)
..-..+. .......++..++.|+.+ ..+.+||+.+.
T Consensus 236 ~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~ 288 (318)
T 2woz_A 236 VMTEFPQERSSISLVSLAGSLYAIGGFAMIQLESKEFAPTEVNDIWKYEDDKK 288 (318)
T ss_dssp ECCCCSSCCBSCEEEEETTEEEEECCBCCBC----CCBCCBCCCEEEEETTTT
T ss_pred ECCCCCCcccceEEEEECCEEEEECCeeccCCCCceeccceeeeEEEEeCCCC
Confidence 2211111 112223456666666653 35778888764
No 334
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=88.20 E-value=0.77 Score=30.41 Aligned_cols=27 Identities=15% Similarity=0.186 Sum_probs=22.8
Q ss_pred EEeeCCCEEEEEeCCCcEEEEECcCCC
Q 045566 86 ALTVRYPLMVVGTADRNLVVFNLQNPQ 112 (112)
Q Consensus 86 ~~~~~~~~~~~~~~d~~v~~~d~~~~~ 112 (112)
+...+..++++-+.|.++++||+++++
T Consensus 226 ~~~~~~~fLftL~~Dh~LRiWsL~t~~ 252 (729)
T 3f7f_A 226 CKLFHERYLIVLTQNCHLKIWDLTSFT 252 (729)
T ss_dssp EEEETTTEEEEEETTCEEEEEETTTTE
T ss_pred EeccCCcEEEEEEcCCeEEEEEcCCCc
Confidence 335667899999999999999999863
No 335
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=87.78 E-value=1.7 Score=28.89 Aligned_cols=35 Identities=17% Similarity=0.185 Sum_probs=27.2
Q ss_pred eeEEEEccCCCEEEEeeCCCcEEEeeCCCCCceEEec
Q 045566 43 IKEVAWIPEMNLLATGSWDKTLKYWDTRQPNPVHTQQ 79 (112)
Q Consensus 43 v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~ 79 (112)
|.++.+ +..++++-+.|+.+++|++++++.+....
T Consensus 224 Is~~~~--~~~fLftL~~Dh~LRiWsL~t~~lv~t~D 258 (729)
T 3f7f_A 224 ISCKLF--HERYLIVLTQNCHLKIWDLTSFTLIQDYD 258 (729)
T ss_dssp EEEEEE--TTTEEEEEETTCEEEEEETTTTEEEEEEE
T ss_pred EEEecc--CCcEEEEEEcCCeEEEEEcCCCceEEeec
Confidence 444444 46799999999999999999988665543
No 336
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=86.37 E-value=4.4 Score=25.34 Aligned_cols=50 Identities=14% Similarity=0.175 Sum_probs=31.7
Q ss_pred eeEEEcCCCC-EEEEEcCCCcEEEEEcCCC---CCcEEEe---------eccCCeeEEEEccC
Q 045566 2 LCSTWKDDGT-TVFSGGCDKQVKMWPLLSG---GQPVTVA---------MHDAPIKEVAWIPE 51 (112)
Q Consensus 2 ~~~~~~~~~~-~l~~~~~~~~v~~~~~~~~---~~~~~~~---------~~~~~v~~~~~~~~ 51 (112)
..++|.|++. .++++...|.|++++.... ..+..+. ..+.....++++|+
T Consensus 17 ~~~a~~pdG~~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~ 79 (463)
T 2wg3_C 17 VGALHSGDGSQRLFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPN 79 (463)
T ss_dssp EEEECCSSSSCCEEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTT
T ss_pred eEEEECCCCCeEEEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCC
Confidence 3688999986 4555667799999974322 1222221 11456789999995
No 337
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=86.21 E-value=7.1 Score=27.59 Aligned_cols=95 Identities=15% Similarity=0.190 Sum_probs=57.3
Q ss_pred CEEEEEcCCCcEEEEEcCCCCCcEEE--eeccCCeeEEEEccC------CCEEEEeeC-CCcEEEeeCCCCCceEEecC-
Q 045566 11 TTVFSGGCDKQVKMWPLLSGGQPVTV--AMHDAPIKEVAWIPE------MNLLATGSW-DKTLKYWDTRQPNPVHTQQL- 80 (112)
Q Consensus 11 ~~l~~~~~~~~v~~~~~~~~~~~~~~--~~~~~~v~~~~~~~~------~~~~~~~~~-~~~i~~w~~~~~~~~~~~~~- 80 (112)
.+++.++ ++.+.++++..++ +... ..-...|.|+++.|. +.+++.|.. |+.++++++...+.+.....
T Consensus 524 ~~vvva~-g~~l~~fel~~~~-L~~~~~~~l~~evscl~i~~~~~~~~~s~~~aVg~~~d~tv~I~sL~~l~~~~~~~L~ 601 (1158)
T 3ei3_A 524 SQVVVAV-GRALYYLQIHPQE-LRQISHTEMEHEVACLDITPLGDSNGLSPLCAIGLWTDISARILKLPSFELLHKEMLG 601 (1158)
T ss_dssp SEEEEEE-TTEEEEEEEETTE-EEEEEEEECSSCEEEEECCCCSSSTTCCSEEEEEETTTTEEEEEETTTCCEEEEEECC
T ss_pred CEEEEEE-CCEEEEEEeeCCc-eeeecccCCCCceEEEEeecCCCCcccccEEEEEECCCCEEEEEECCCCCeEEEEECC
Confidence 3444443 4566666655432 1111 123567999998763 468888987 99999999987665543322
Q ss_pred ---CCeEEEEee--CCCEEEEEeCCCcEEEEE
Q 045566 81 ---PDRCYALTV--RYPLMVVGTADRNLVVFN 107 (112)
Q Consensus 81 ---~~~~~~~~~--~~~~~~~~~~d~~v~~~d 107 (112)
....+.+.. ...++..|-.||.+.-+.
T Consensus 602 ~~~~p~si~l~~~~~~~~L~igl~dG~l~~~~ 633 (1158)
T 3ei3_A 602 GEIIPRSILMTTFESSHYLLCALGDGALFYFG 633 (1158)
T ss_dssp SSCCEEEEEEEEETTEEEEEEEETTSEEEEEE
T ss_pred CCCCCcEEEEEEeCCCcEEEEEeCCCeEEEEE
Confidence 123333322 235778888888875443
No 338
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=85.62 E-value=3.2 Score=24.84 Aligned_cols=59 Identities=14% Similarity=0.130 Sum_probs=37.6
Q ss_pred CEEEEeeCCCcEEEeeCCCCCceEEecCC--CeEEEEe-e---CCCEEEEE--eCCCcEEEEECcCC
Q 045566 53 NLLATGSWDKTLKYWDTRQPNPVHTQQLP--DRCYALT-V---RYPLMVVG--TADRNLVVFNLQNP 111 (112)
Q Consensus 53 ~~~~~~~~~~~i~~w~~~~~~~~~~~~~~--~~~~~~~-~---~~~~~~~~--~~d~~v~~~d~~~~ 111 (112)
..++.++.||.+.-.|..+++.+..+... ...+... + .+..++.. ..||.+..+|..+|
T Consensus 11 ~~V~v~t~dG~l~Ald~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G 77 (339)
T 2be1_A 11 DILIAADVEGGLHAVDRRNGHIIWSIEPENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQG 77 (339)
T ss_dssp EEEEEEETTSCEEEEETTTTEEEEEECGGGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTE
T ss_pred CEEEEEeCCCeEEEEECCCCcEEEEecCCccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCC
Confidence 36778889999999999888888777554 1122211 1 12234433 47888888887654
No 339
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=85.61 E-value=5.6 Score=25.84 Aligned_cols=96 Identities=10% Similarity=-0.038 Sum_probs=55.1
Q ss_pred eeEEEcCCCCEE-EEEcCCCcEEEEEcCCCCCcEEEeeccCCeeEEEEcc-CCCEEEEeeCCCcEEEeeCCCCCceEEec
Q 045566 2 LCSTWKDDGTTV-FSGGCDKQVKMWPLLSGGQPVTVAMHDAPIKEVAWIP-EMNLLATGSWDKTLKYWDTRQPNPVHTQQ 79 (112)
Q Consensus 2 ~~~~~~~~~~~l-~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~~~~~~~~~i~~w~~~~~~~~~~~~ 79 (112)
..++|++.+..| ++-...+.|..+++........+.........+++.. .+.++.+-...+.|.+.++..........
T Consensus 352 ~~ld~d~~~~~ly~sD~~~~~I~r~~~~g~~~~~v~~~~~~~p~GlAvD~~~~~lY~tD~~~~~I~v~~~~G~~~~~l~~ 431 (619)
T 3s94_A 352 IAIDYDPVEGYIYWTDDEVRAIRRSFIDGSGSQFVVTAQIAHPDGIAVDWVARNLYWTDTGTDRIEVTRLNGTMRKILIS 431 (619)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEC
T ss_pred EEEEEEcCCCeEEEEeCCCCeEEEEEcCCCccEEEEECCCCCcCceEEecccCcEEEEeCCCCcEEEEeCCCCeEEEEEE
Confidence 357788754444 4445567788887654333222332234567888886 55566666667889999887553322221
Q ss_pred C---CCeEEEEeeCCCEEEEE
Q 045566 80 L---PDRCYALTVRYPLMVVG 97 (112)
Q Consensus 80 ~---~~~~~~~~~~~~~~~~~ 97 (112)
. ....++++|....++..
T Consensus 432 ~~l~~P~~iavdp~~G~ly~t 452 (619)
T 3s94_A 432 EDLEEPRAIVLDPMVGYMYWT 452 (619)
T ss_dssp TTCCSEEEEEEETTTTEEEEE
T ss_pred CCCCCeeeEEEEcCCCcEEEe
Confidence 1 23567777754344433
No 340
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=84.95 E-value=6 Score=25.68 Aligned_cols=107 Identities=9% Similarity=-0.107 Sum_probs=60.8
Q ss_pred eEEEcCCCC-EEEEEcCCCcEEEEEcCCCCCcEEEeeccCCeeEEEEccC-CCEEEEeeC-CCcEEEeeCCCCCceEEec
Q 045566 3 CSTWKDDGT-TVFSGGCDKQVKMWPLLSGGQPVTVAMHDAPIKEVAWIPE-MNLLATGSW-DKTLKYWDTRQPNPVHTQQ 79 (112)
Q Consensus 3 ~~~~~~~~~-~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~~~~~~~-~~~i~~w~~~~~~~~~~~~ 79 (112)
.+++++.++ ..++-...+.|.+.++..................+++.|. +.++++-.. .+.|...++..........
T Consensus 88 GlAvD~~~~~ly~~d~~~~~I~v~~~dG~~~~~l~~~~l~~P~~Iavdp~~g~ly~tD~g~~~~I~r~~~dG~~~~~l~~ 167 (619)
T 3s94_A 88 GLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIIIN 167 (619)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCCEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEEC
T ss_pred eEEEEecCCEEEEEeCCCCEEEEEECCCCCEEEEEeCCCCCCceEEEecCCCeEEEeccCCCCEEEEEECCCCceEEEEe
Confidence 577887544 4455566788999987643332222233445578999985 444444322 4566666665433322221
Q ss_pred C---CCeEEEEeeCCCEEEEEeC-CCcEEEEECc
Q 045566 80 L---PDRCYALTVRYPLMVVGTA-DRNLVVFNLQ 109 (112)
Q Consensus 80 ~---~~~~~~~~~~~~~~~~~~~-d~~v~~~d~~ 109 (112)
. ....+++++.+..|+.+.. .+.|...|+.
T Consensus 168 ~~~~~P~Glald~~~~~LY~aD~~~~~I~~~~~d 201 (619)
T 3s94_A 168 SEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLD 201 (619)
T ss_dssp SSCSSEEEEEEETTTTEEEEEETTTCCEEEESSS
T ss_pred CCCCCCcEEEEEccCCEEEEEeCCCCeEEEecCC
Confidence 1 2256788876666655543 4567766654
No 341
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=84.51 E-value=6.4 Score=25.64 Aligned_cols=56 Identities=11% Similarity=0.097 Sum_probs=35.8
Q ss_pred eEEEcCCCCEEEEEcC------------CCcEEEEEcCCCCCcEEEee-ccCCeeEEEEccCCCEEEEe
Q 045566 3 CSTWKDDGTTVFSGGC------------DKQVKMWPLLSGGQPVTVAM-HDAPIKEVAWIPEMNLLATG 58 (112)
Q Consensus 3 ~~~~~~~~~~l~~~~~------------~~~v~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~~~ 58 (112)
.+.|+++|.+.+.... +..|..++..+++....+.. ....++.++|+||++.|+..
T Consensus 480 nL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P~~aEpnGiafSPD~ktLfV~ 548 (592)
T 4a9v_A 480 GLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp EEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEE
T ss_pred ceEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCCCCccccCCEECCCCCEEEEE
Confidence 5788999887774322 12466666555554433332 23568999999999877654
No 342
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=79.91 E-value=6.9 Score=22.84 Aligned_cols=98 Identities=6% Similarity=-0.085 Sum_probs=48.6
Q ss_pred EEcCCCCEEEEEcCC--------------CcEEEEEcCCCCCcEEEeeccCCeeEEEEccCCCEEEEee----CCCcEEE
Q 045566 5 TWKDDGTTVFSGGCD--------------KQVKMWPLLSGGQPVTVAMHDAPIKEVAWIPEMNLLATGS----WDKTLKY 66 (112)
Q Consensus 5 ~~~~~~~~l~~~~~~--------------~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~----~~~~i~~ 66 (112)
.+++++..|+-+..+ ..|+..++...+. ..+... ....+++++..++-.. .+..|..
T Consensus 59 ~i~~~g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i~~dg~~~-~~l~~~----~~~~~s~~g~~Iy~~~~~~~~~~~Iy~ 133 (302)
T 3s25_A 59 YINADKNYVYYVRNNNQKITSQTFFSYDRNSLCRIKRNGHGS-TVLDPD----PCIYASLIGNYIYYLHYDTQTATSLYR 133 (302)
T ss_dssp EEEECSSEEEEEEECC------CCSSCCSEEEEEEETTSCCC-EEEECS----CEEEEEEETTEEEEEEESSSSCEEEEE
T ss_pred eEEEcCCEEEEEECCCCcccccceeccCCCeEEEEeCCCCcc-eEeecC----CccEEEEeCCEEEEEeecCCCCceEEE
Confidence 456778877666543 2455566554443 222211 1235677677666544 3344555
Q ss_pred eeCCCCCceEEecCCCeEEEEeeCCCEEEEEeC-CCcEEEEECc
Q 045566 67 WDTRQPNPVHTQQLPDRCYALTVRYPLMVVGTA-DRNLVVFNLQ 109 (112)
Q Consensus 67 w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-d~~v~~~d~~ 109 (112)
.++............. ..++|.++.|+-.+. ...|..-++.
T Consensus 134 ~~~dGs~~~~lt~~~~--~~~~~~g~~iy~t~~g~~~Iy~~~l~ 175 (302)
T 3s25_A 134 IRIDGEEKKKIKNHYL--FTCNTSDRYFYYNNPKNGQLYRYDTA 175 (302)
T ss_dssp EETTSCCCEEEESSCC--CCSEEETTEEEEECTTTCCEEEEETT
T ss_pred EECCCCCeEEEeCCCc--eEeeEECCEEEEEeCCCceEEEEECC
Confidence 5665433322222222 345666666655444 3455554443
No 343
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=79.12 E-value=7.9 Score=23.06 Aligned_cols=58 Identities=14% Similarity=-0.010 Sum_probs=31.8
Q ss_pred eeEEEcCC---CCEEEEEcC----C----CcEEEEEcCCCC-C---cEE----Eee-ccCCeeEEEEccCCCEEEEee
Q 045566 2 LCSTWKDD---GTTVFSGGC----D----KQVKMWPLLSGG-Q---PVT----VAM-HDAPIKEVAWIPEMNLLATGS 59 (112)
Q Consensus 2 ~~~~~~~~---~~~l~~~~~----~----~~v~~~~~~~~~-~---~~~----~~~-~~~~v~~~~~~~~~~~~~~~~ 59 (112)
..++++|+ +..|.++.. + ..|..++..... . ... +.. ....-..+.|.|+|.++++.+
T Consensus 76 ~gia~~pdf~~~g~lyv~~~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~Lyvt~G 153 (354)
T 3a9g_A 76 LGLALHPEFPKKSWVYLYASYFAEGGHIRNRVIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGMLYITTG 153 (354)
T ss_dssp EEEEECTTTTTSCEEEEEEEEECGGGCEEEEEEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSCEEEECC
T ss_pred eeEEeCCCCCcCCEEEEEEeccCCCCCcceEEEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCcEEEEEC
Confidence 35788887 455544432 2 456667655331 1 111 221 111246799999998777754
No 344
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=76.42 E-value=13 Score=24.22 Aligned_cols=107 Identities=6% Similarity=-0.136 Sum_probs=58.5
Q ss_pred eeEEEcCCCCEEEEEc--CCCcEEEEEcCCCCCcEEEeeccCCeeEEEEccCCCEE-EEeeCCCcEEEeeCCCCCceEEe
Q 045566 2 LCSTWKDDGTTVFSGG--CDKQVKMWPLLSGGQPVTVAMHDAPIKEVAWIPEMNLL-ATGSWDKTLKYWDTRQPNPVHTQ 78 (112)
Q Consensus 2 ~~~~~~~~~~~l~~~~--~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~-~~~~~~~~i~~w~~~~~~~~~~~ 78 (112)
..++++|....|+... ..+.|...++..... ..+.........+++++++..+ ++-...+.|...++.........
T Consensus 126 ~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~~~-~~l~~~~~~P~GlalD~~~~~LY~aD~~~~~I~~~d~dG~~~~v~~ 204 (628)
T 4a0p_A 126 RALALDPAEGFMYWTEWGGKPKIDRAAMDGSER-TTLVPNVGRANGLTIDYAKRRLYWTDLDTNLIESSNMLGLNREVIA 204 (628)
T ss_dssp EEEEEETTTTEEEEEECSSSCEEEEEETTSCSC-EEEECSCSSEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEE
T ss_pred ccEEEccCCCeEEEeCCCCCCEEEEEeCCCCce-EEEECCCCCcceEEEccccCEEEEEECCCCEEEEEcCCCCceEEee
Confidence 3577888544444443 256677777653333 3333334456889999865544 44455778999998654332111
Q ss_pred cC--CCeEEEEeeCCCEEEEEe-CCCcEEEEECcCC
Q 045566 79 QL--PDRCYALTVRYPLMVVGT-ADRNLVVFNLQNP 111 (112)
Q Consensus 79 ~~--~~~~~~~~~~~~~~~~~~-~d~~v~~~d~~~~ 111 (112)
.. ....+++ .+..++... ..+.|...|..++
T Consensus 205 ~~l~~P~glav--~~~~ly~tD~~~~~I~~~dk~tg 238 (628)
T 4a0p_A 205 DDLPHPFGLTQ--YQDYIYWTDWSRRSIERANKTSG 238 (628)
T ss_dssp ECCSCEEEEEE--ETTEEEEEETTTTEEEEEETTTC
T ss_pred ccCCCceEEEE--ECCEEEEecCCCCEEEEEECCCC
Confidence 11 1123333 334455444 3667777776554
No 345
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=75.87 E-value=14 Score=24.33 Aligned_cols=104 Identities=12% Similarity=0.157 Sum_probs=55.1
Q ss_pred CCCCEEEEEcCCC--cEEEEEcCCCCCcEE-----EeeccCCeeEEEEccC-CCEEEEeeC--C-----CcEEEeeCCCC
Q 045566 8 DDGTTVFSGGCDK--QVKMWPLLSGGQPVT-----VAMHDAPIKEVAWIPE-MNLLATGSW--D-----KTLKYWDTRQP 72 (112)
Q Consensus 8 ~~~~~l~~~~~~~--~v~~~~~~~~~~~~~-----~~~~~~~v~~~~~~~~-~~~~~~~~~--~-----~~i~~w~~~~~ 72 (112)
.++..++.|+.++ .+.+||+.+..-... .+........+.+..+ +..++.|+. + ..+..||+.+.
T Consensus 499 ~~~~iyv~GG~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~a~v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~~ 578 (695)
T 2zwa_A 499 PDGNVLILGGVTEGPAMLLYNVTEEIFKDVTPKDEFFQNSLVSAGLEFDPVSKQGIILGGGFMDQTTVSDKAIIFKYDAE 578 (695)
T ss_dssp TTSCEEEECCBCSSCSEEEEETTTTEEEECCCSSGGGGSCCBSCEEEEETTTTEEEEECCBCTTSSCBCCEEEEEEECTT
T ss_pred cCCEEEEECCCCCCCCEEEEECCCCceEEccCCCCCCCcccceeEEEEeCCCCEEEEECCcCCCCCeeeCcEEEEEccCC
Confidence 3677777776544 688888765431110 1111122233455554 667777765 2 35888898877
Q ss_pred Cc------eEEec---CC-C-eEEEEeeCCCEEEEEeC--------CCcEEEEECcCC
Q 045566 73 NP------VHTQQ---LP-D-RCYALTVRYPLMVVGTA--------DRNLVVFNLQNP 111 (112)
Q Consensus 73 ~~------~~~~~---~~-~-~~~~~~~~~~~~~~~~~--------d~~v~~~d~~~~ 111 (112)
.. ..... .+ . .......++..++.|+. ...+.+||+.+.
T Consensus 579 ~w~~~~~W~~~~~~p~~~R~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~t~ 636 (695)
T 2zwa_A 579 NATEPITVIKKLQHPLFQRYGSQIKYITPRKLLIVGGTSPSGLFDRTNSIISLDPLSE 636 (695)
T ss_dssp CSSCCEEEEEEEECGGGCCBSCEEEEEETTEEEEECCBCSSCCCCTTTSEEEEETTTT
T ss_pred ccccceEEEEcCCCCCCCcccceEEEeCCCEEEEECCccCCCCCCCCCeEEEEECCCC
Confidence 61 11111 11 1 12222232667777764 345888988764
No 346
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=74.29 E-value=22 Score=26.48 Aligned_cols=70 Identities=9% Similarity=-0.080 Sum_probs=44.2
Q ss_pred eEEEcCCCCEEEEEcCCCcEEEEEcCCCCCcEEEeeccCCeeEEEEccCCCEEEEeeCCCcEEEeeCCCC
Q 045566 3 CSTWKDDGTTVFSGGCDKQVKMWPLLSGGQPVTVAMHDAPIKEVAWIPEMNLLATGSWDKTLKYWDTRQP 72 (112)
Q Consensus 3 ~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~ 72 (112)
++..++....+..-+.-|.+.+||+.++..+..-+-...+|...+......-++.....|.|.--.+...
T Consensus 263 ~~~vs~k~g~iy~itk~G~~~~~d~~t~~~i~~~ris~~~iF~~~~~~~~~g~~~vnr~G~vl~v~v~~~ 332 (1630)
T 1xi4_A 263 AMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRISGETIFVTAPHEATAGIIGVNRKGQVLSVCVEEE 332 (1630)
T ss_pred EEEeccccCEEEEEecCceEEEEecccchhhhhccccCCceEEeccCCCCCceEEEcCCceEEEEEEccc
Confidence 4556666667777788899999999999887654444455554444443334455556666665555443
No 347
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=74.13 E-value=16 Score=24.10 Aligned_cols=102 Identities=10% Similarity=0.165 Sum_probs=53.4
Q ss_pred CCCEEEEEcCC----CcEEEEEcCCCCCcEEE--------eeccCCeeEEEEcc-CCCEEEEeeCC------CcEEEeeC
Q 045566 9 DGTTVFSGGCD----KQVKMWPLLSGGQPVTV--------AMHDAPIKEVAWIP-EMNLLATGSWD------KTLKYWDT 69 (112)
Q Consensus 9 ~~~~l~~~~~~----~~v~~~~~~~~~~~~~~--------~~~~~~v~~~~~~~-~~~~~~~~~~~------~~i~~w~~ 69 (112)
++..++.|+.+ ..+.+||..+.+-...- +..... .++...+ ++..++.|+.+ ..+.+||+
T Consensus 397 ~~~iyv~GG~~~~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~-hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd~ 475 (695)
T 2zwa_A 397 GNDVFYMGGSNPYRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMC-HTFTTISRNNQLLLIGGRKAPHQGLSDNWIFDM 475 (695)
T ss_dssp SSCEEEECCBSSSBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBS-CEEEEETTTTEEEEECCBSSTTCBCCCCEEEET
T ss_pred CCEEEEECCCCCCCcCcEEEEECCCCeEEEeccCCCCCCCCccccc-eEEEEEccCCEEEEEcCCCCCCCccccEEEEeC
Confidence 45566666643 35778887655422111 111111 2333333 66777777643 34778888
Q ss_pred CCCCceEEecCC--C--eEEEEeeCCCEEEEEeCCC--cEEEEECcCC
Q 045566 70 RQPNPVHTQQLP--D--RCYALTVRYPLMVVGTADR--NLVVFNLQNP 111 (112)
Q Consensus 70 ~~~~~~~~~~~~--~--~~~~~~~~~~~~~~~~~d~--~v~~~d~~~~ 111 (112)
.+.+....-..+ . ...+.-.++..++.|+.++ .+.+||..+.
T Consensus 476 ~t~~W~~~~~~p~~R~~h~~~~~~~~~iyv~GG~~~~~~v~~yd~~t~ 523 (695)
T 2zwa_A 476 KTREWSMIKSLSHTRFRHSACSLPDGNVLILGGVTEGPAMLLYNVTEE 523 (695)
T ss_dssp TTTEEEECCCCSBCCBSCEEEECTTSCEEEECCBCSSCSEEEEETTTT
T ss_pred CCCcEEECCCCCCCcccceEEEEcCCEEEEECCCCCCCCEEEEECCCC
Confidence 765432221111 1 1222223777777777654 6888887654
No 348
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=68.90 E-value=16 Score=21.74 Aligned_cols=66 Identities=12% Similarity=0.082 Sum_probs=39.0
Q ss_pred CCeeEEEEccCCCEEEEeeCCCcEEEeeCCCCCc--eEEec------CCCeEEEEeeC---CCEEEEEeCC------CcE
Q 045566 41 APIKEVAWIPEMNLLATGSWDKTLKYWDTRQPNP--VHTQQ------LPDRCYALTVR---YPLMVVGTAD------RNL 103 (112)
Q Consensus 41 ~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~--~~~~~------~~~~~~~~~~~---~~~~~~~~~d------~~v 103 (112)
..-..++|.|++.++++ ...+.|..++ .++. +.... .....++++|+ +..++++... ..|
T Consensus 31 ~~P~~ia~~pdG~l~V~-e~~g~I~~i~--~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~v 107 (352)
T 2ism_A 31 EVPWALAFLPDGGMLIA-ERPGRIRLFR--EGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQV 107 (352)
T ss_dssp SCEEEEEECTTSCEEEE-ETTTEEEEEE--TTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSEEEE
T ss_pred CCceEEEEcCCCeEEEE-eCCCeEEEEE--CCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCccEE
Confidence 44578999999986655 4568888887 3221 11111 12256788887 4555554432 456
Q ss_pred EEEECc
Q 045566 104 VVFNLQ 109 (112)
Q Consensus 104 ~~~d~~ 109 (112)
..++..
T Consensus 108 ~r~~~~ 113 (352)
T 2ism_A 108 VRLRHL 113 (352)
T ss_dssp EEEEEC
T ss_pred EEEEeC
Confidence 666544
No 349
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=68.06 E-value=16 Score=21.39 Aligned_cols=90 Identities=6% Similarity=-0.099 Sum_probs=45.7
Q ss_pred EEEcCCCCEEEEEc--CCC--cEEEEEcCCCCCcEEEeeccCCeeEEEEccCCCEEE-EeeCCCcEEEeeCCCCCceEEe
Q 045566 4 STWKDDGTTVFSGG--CDK--QVKMWPLLSGGQPVTVAMHDAPIKEVAWIPEMNLLA-TGSWDKTLKYWDTRQPNPVHTQ 78 (112)
Q Consensus 4 ~~~~~~~~~l~~~~--~~~--~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~-~~~~~~~i~~w~~~~~~~~~~~ 78 (112)
..|+++++.|+-.. .++ .|...++.. .....+..+.. ..++++++.+. +......|...++.........
T Consensus 109 ~~~s~~g~~Iy~~~~~~~~~~~Iy~~~~dG-s~~~~lt~~~~----~~~~~~g~~iy~t~~g~~~Iy~~~l~g~~~~~l~ 183 (302)
T 3s25_A 109 IYASLIGNYIYYLHYDTQTATSLYRIRIDG-EEKKKIKNHYL----FTCNTSDRYFYYNNPKNGQLYRYDTASQSEALFY 183 (302)
T ss_dssp EEEEEETTEEEEEEESSSSCEEEEEEETTS-CCCEEEESSCC----CCSEEETTEEEEECTTTCCEEEEETTTTEEEEEE
T ss_pred cEEEEeCCEEEEEeecCCCCceEEEEECCC-CCeEEEeCCCc----eEeeEECCEEEEEeCCCceEEEEECCCCCEEEEe
Confidence 35777777777654 333 444444442 33333433322 34566666555 4334667887777655433323
Q ss_pred cCCCeEEEEeeCCCEEEEEeC
Q 045566 79 QLPDRCYALTVRYPLMVVGTA 99 (112)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~ 99 (112)
.... ...+.|.+..++-...
T Consensus 184 ~~~~-~~~~~P~g~~iy~t~~ 203 (302)
T 3s25_A 184 DCNC-YKPVVLDDTNVYYMDV 203 (302)
T ss_dssp CSCE-EEEEEEETTEEEEEEG
T ss_pred CCCc-cceeeecCCEEEEEEc
Confidence 3222 2335566666655443
No 350
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=67.38 E-value=16 Score=21.36 Aligned_cols=47 Identities=6% Similarity=0.002 Sum_probs=24.0
Q ss_pred CcEEEeeCCCCCceEE--ecCCC-e-EEEEeeCCCEEEEEeC------CCcEEEEEC
Q 045566 62 KTLKYWDTRQPNPVHT--QQLPD-R-CYALTVRYPLMVVGTA------DRNLVVFNL 108 (112)
Q Consensus 62 ~~i~~w~~~~~~~~~~--~~~~~-~-~~~~~~~~~~~~~~~~------d~~v~~~d~ 108 (112)
..+.+||+.+.+.... ...+. . ..+...++.+++.|+. ...+..||+
T Consensus 168 ~~v~~yd~~~~~W~~~~~~p~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~v~~~d~ 224 (357)
T 2uvk_A 168 KFLLSFDPSTQQWSYAGESPWYGTAGAAVVNKGDKTWLINGEAKPGLRTDAVFELDF 224 (357)
T ss_dssp CEEEEEETTTTEEEEEEECSSCCCBSCEEEEETTEEEEECCEEETTEECCCEEEEEC
T ss_pred ccEEEEeCCCCcEEECCCCCCCCcccccEEEECCEEEEEeeecCCCcccCceEEEEe
Confidence 4688899877653322 22111 1 2222335556666553 234666765
No 351
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=66.40 E-value=17 Score=21.26 Aligned_cols=90 Identities=10% Similarity=0.033 Sum_probs=44.3
Q ss_pred CCCEEEEEcC-CCcEEEEEcCCC-CCcEEEee----ccCCeeEEEEccCCCEEEEeeC-C---------CcEEEeeCCCC
Q 045566 9 DGTTVFSGGC-DKQVKMWPLLSG-GQPVTVAM----HDAPIKEVAWIPEMNLLATGSW-D---------KTLKYWDTRQP 72 (112)
Q Consensus 9 ~~~~l~~~~~-~~~v~~~~~~~~-~~~~~~~~----~~~~v~~~~~~~~~~~~~~~~~-~---------~~i~~w~~~~~ 72 (112)
++..++.|+. ...+..||+.+. ..-..+.. .......+.+ ++..++.|+. + ..+..||+.+.
T Consensus 19 ~~~iyv~GG~~~~~~~~~d~~~~~~~W~~~~~~p~~~R~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~v~~yd~~~~ 96 (357)
T 2uvk_A 19 NDTVYIGLGSAGTAWYKLDTQAKDKKWTALAAFPGGPRDQATSAFI--DGNLYVFGGIGKNSEGLTQVFNDVHKYNPKTN 96 (357)
T ss_dssp TTEEEEECGGGTTCEEEEETTSSSCCEEECCCCTTCCCBSCEEEEE--TTEEEEECCEEECTTSCEEECCCEEEEETTTT
T ss_pred CCEEEEEeCcCCCeEEEEccccCCCCeeECCCCCCCcCccceEEEE--CCEEEEEcCCCCCCCccceeeccEEEEeCCCC
Confidence 4555566653 346888887642 22222211 1111122222 5666676665 2 45888888776
Q ss_pred CceEEe--c-CCC-eEEEEeeCCCEEEEEeCC
Q 045566 73 NPVHTQ--Q-LPD-RCYALTVRYPLMVVGTAD 100 (112)
Q Consensus 73 ~~~~~~--~-~~~-~~~~~~~~~~~~~~~~~d 100 (112)
+..... . .+. ...+...++.+++.|+.+
T Consensus 97 ~W~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~ 128 (357)
T 2uvk_A 97 SWVKLMSHAPMGMAGHVTFVHNGKAYVTGGVN 128 (357)
T ss_dssp EEEECSCCCSSCCSSEEEEEETTEEEEEECCC
T ss_pred cEEECCCCCCcccccceEEEECCEEEEEeCcC
Confidence 432211 1 111 122233567777777754
No 352
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=58.17 E-value=36 Score=22.31 Aligned_cols=54 Identities=9% Similarity=-0.043 Sum_probs=33.6
Q ss_pred eEEEEccCCCEEEEeeCC------------CcEEEeeCCCCCceEEecC----CCeEEEEeeCCCEEEEE
Q 045566 44 KEVAWIPEMNLLATGSWD------------KTLKYWDTRQPNPVHTQQL----PDRCYALTVRYPLMVVG 97 (112)
Q Consensus 44 ~~~~~~~~~~~~~~~~~~------------~~i~~w~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~ 97 (112)
=-|.|+|.|.+++.-..+ ..+.+.+..+++..+-+.. .....+|+|+++.|++.
T Consensus 479 DNL~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P~gaE~TG~~fspDg~tlfvn 548 (592)
T 3zwu_A 479 DGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp EEEEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEE
T ss_pred cceEECCCCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCCCCccCcCeeECCCCCEEEEE
Confidence 458899999877765432 2344555555554433333 23678899998877665
No 353
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=52.60 E-value=40 Score=21.04 Aligned_cols=56 Identities=11% Similarity=-0.009 Sum_probs=31.0
Q ss_pred CCEEEEEcCCCcEEEEEcCC-CCCcE----EEeeccCCeeEEEEccCCC-EEEEeeCCCcEE
Q 045566 10 GTTVFSGGCDKQVKMWPLLS-GGQPV----TVAMHDAPIKEVAWIPEMN-LLATGSWDKTLK 65 (112)
Q Consensus 10 ~~~l~~~~~~~~v~~~~~~~-~~~~~----~~~~~~~~v~~~~~~~~~~-~~~~~~~~~~i~ 65 (112)
+..++..-..+.|....+.. +.... .+......+..+++.|+|. ++++....|.+.
T Consensus 369 g~lfv~~~~~~~i~~v~l~~~g~~~~~~~~~~~~~~~R~~dv~~gpDG~~Lyv~~d~~G~i~ 430 (454)
T 1cru_A 369 NTLLVPSLKRGVIFRIKLDPTYSTTYDDAVPMFKSNNRYRDVIASPDGNVLYVLTDTAGNVQ 430 (454)
T ss_dssp TEEEEEBSSSCCEEEEEECTTSSSEEEEEEEESCCSSCEEEEEECTTSSCEEEEECSSCCEE
T ss_pred CcEEEeecCCCEEEEEEECCCCCeeeeeeeeecccCCCceeEEECCCCCEEEEEECCCCCCc
Confidence 33444433445566555553 22221 2222235788899999997 666665566555
No 354
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=47.48 E-value=59 Score=21.56 Aligned_cols=68 Identities=19% Similarity=0.098 Sum_probs=37.6
Q ss_pred eEEEcCCCCEEEEEcCCCcEEEEEcCCCCCcEEEeeccCCeeEEEEccCCCEEEEeeCCCcEEEeeCCCCC
Q 045566 3 CSTWKDDGTTVFSGGCDKQVKMWPLLSGGQPVTVAMHDAPIKEVAWIPEMNLLATGSWDKTLKYWDTRQPN 73 (112)
Q Consensus 3 ~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~ 73 (112)
++...+++..|..|.. +-+..++..+.+...........|.++...+++.+.+.. .+| +.+++..+.+
T Consensus 195 ~i~~d~~~~~lWigt~-~Gl~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWigT-~~G-l~~~~~~~~~ 262 (758)
T 3ott_A 195 SLLEDTTRQCVWIGTE-GYLFQYFPSTGQIKQTEAFHNNSIKSLALDGNGDLLAGT-DNG-LYVYHNDTTP 262 (758)
T ss_dssp EEEEETTTTEEEEEEE-EEEEEEETTTTEEEEEEEEEEEEEEEEEECTTCCEEEEE-TTE-EEEECCTTSC
T ss_pred EEEEECCCCEEEEEEC-CCCeEEcCCCCeEEeccCCCCCeEEEEEEcCCCCEEEEe-CCc-eeEEecCCCc
Confidence 4445555555555554 346777765443211111123457888888788776654 444 6777766543
No 355
>1ukf_A Avirulence protein AVRPPH3; AVRPPHB, hypersensitive response, hydrolase; 1.35A {Pseudomonas syringae PV} SCOP: d.3.1.10
Probab=46.80 E-value=14 Score=20.23 Aligned_cols=29 Identities=10% Similarity=0.074 Sum_probs=18.8
Q ss_pred eEEEcCCC-CEEEEEcCCCcEEEEEcCCCC
Q 045566 3 CSTWKDDG-TTVFSGGCDKQVKMWPLLSGG 31 (112)
Q Consensus 3 ~~~~~~~~-~~l~~~~~~~~v~~~~~~~~~ 31 (112)
++.|.+.+ .-+++.+.++.+.++|++-++
T Consensus 123 sl~f~~g~aHaia~S~~g~~~tlFDPN~GE 152 (188)
T 1ukf_A 123 SLRFANVQGHAIACSCEGSQFKLFDPNLGE 152 (188)
T ss_dssp EEEETTTEEEEEEEEEETTEEEEEETTTEE
T ss_pred EEEecCCCceeEEeccCCCeEEEeCCCCce
Confidence 34555432 456666778889999977554
No 356
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=46.30 E-value=80 Score=22.72 Aligned_cols=69 Identities=14% Similarity=0.055 Sum_probs=43.1
Q ss_pred CeeEEEcCC------CCEEEEEcC-CCcEEEEEcCCCCCcEEEee-ccCCeeEEEEcc--CCCEEEEeeCCCcEEEeeC
Q 045566 1 VLCSTWKDD------GTTVFSGGC-DKQVKMWPLLSGGQPVTVAM-HDAPIKEVAWIP--EMNLLATGSWDKTLKYWDT 69 (112)
Q Consensus 1 v~~~~~~~~------~~~l~~~~~-~~~v~~~~~~~~~~~~~~~~-~~~~v~~~~~~~--~~~~~~~~~~~~~i~~w~~ 69 (112)
|.|+++.|. ++++++|.. |++++++++...+.+....- ......++.+.. ...++..|-.||.+.-+.+
T Consensus 556 vscl~i~~~~~~~~~s~~~aVg~~~d~tv~I~sL~~l~~~~~~~L~~~~~p~si~l~~~~~~~~L~igl~dG~l~~~~~ 634 (1158)
T 3ei3_A 556 VACLDITPLGDSNGLSPLCAIGLWTDISARILKLPSFELLHKEMLGGEIIPRSILMTTFESSHYLLCALGDGALFYFGL 634 (1158)
T ss_dssp EEEEECCCCSSSTTCCSEEEEEETTTTEEEEEETTTCCEEEEEECCSSCCEEEEEEEEETTEEEEEEEETTSEEEEEEE
T ss_pred eEEEEeecCCCCcccccEEEEEECCCCEEEEEECCCCCeEEEEECCCCCCCcEEEEEEeCCCcEEEEEeCCCeEEEEEE
Confidence 457777653 468899986 99999999986554432221 112334444332 3456778888998765544
No 357
>3mwp_A Nucleoprotein; structural genomics, scottish structural PROT facility, SSPF, nuclear protein; 1.79A {Lassa virus josiah} PDB: 3mwt_A 3mx2_A* 3mx5_A* 3r3l_A 3t5q_A 3t5n_A
Probab=45.16 E-value=4.4 Score=25.39 Aligned_cols=16 Identities=19% Similarity=0.308 Sum_probs=7.6
Q ss_pred EEeCCCcEEEEECcCC
Q 045566 96 VGTADRNLVVFNLQNP 111 (112)
Q Consensus 96 ~~~~d~~v~~~d~~~~ 111 (112)
.+..+|-|++||++.+
T Consensus 162 ~~~~~GVVrvWDVkd~ 177 (577)
T 3mwp_A 162 RAGRDGVVRVWDVKNA 177 (577)
T ss_dssp ----CCEECSEECSCG
T ss_pred CCCCCCeEEEEecCCH
Confidence 3455666666666553
No 358
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=41.11 E-value=56 Score=19.44 Aligned_cols=48 Identities=15% Similarity=0.081 Sum_probs=23.7
Q ss_pred CCEEEEEcCCCcEEEEEcCCCCCcEE--E-eeccCCeeEEEEccCCCEEEE
Q 045566 10 GTTVFSGGCDKQVKMWPLLSGGQPVT--V-AMHDAPIKEVAWIPEMNLLAT 57 (112)
Q Consensus 10 ~~~l~~~~~~~~v~~~~~~~~~~~~~--~-~~~~~~v~~~~~~~~~~~~~~ 57 (112)
+.+++..-..+.|...++..++.... + ......+..+++.|+|.++++
T Consensus 289 g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~rp~~v~~~pdG~lyv~ 339 (353)
T 2g8s_A 289 QKLFIGALKDKDVIVMSVNGDKVTEDGRILTDRGQRIRDVRTGPDGYLYVL 339 (353)
T ss_dssp TEEEEEETTTTEEEEEEEETTEEEEEEEESGGGCCCEEEEEECTTSCEEEE
T ss_pred CcEEEEEccCCEEEEEEeCCCeEeeeEEcccCCCCceeEEEECCCCcEEEE
Confidence 44555444555566555543322111 1 111235667777777765554
No 359
>1q47_A Semaphorin 3A; beta propeller, signaling protein; HET: NAG; 2.80A {Mus musculus} SCOP: b.69.12.1
Probab=35.65 E-value=87 Score=20.06 Aligned_cols=26 Identities=15% Similarity=0.105 Sum_probs=15.8
Q ss_pred cCCeeEEEEccCCCEEEEeeCCCcEE
Q 045566 40 DAPIKEVAWIPEMNLLATGSWDKTLK 65 (112)
Q Consensus 40 ~~~v~~~~~~~~~~~~~~~~~~~~i~ 65 (112)
..+|..+.++++..++..++.++.++
T Consensus 461 ~~pI~~m~l~~~~~~Lyv~s~~~V~~ 486 (495)
T 1q47_A 461 PTTISAMELSTKQQQLYIGSTAGVAQ 486 (495)
T ss_dssp CCCCCEEEEETTTTEEEEEBSSCEEE
T ss_pred CCccceEEEcCCCCEEEEEECCeEEE
Confidence 35666666666666666666555444
No 360
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=32.69 E-value=88 Score=19.27 Aligned_cols=71 Identities=15% Similarity=0.230 Sum_probs=44.6
Q ss_pred CeeEEEEccCCCEEEE--eeC-------------CCcEEEeeCCCC--CceEEecCCC---------eEEEEe---eC--
Q 045566 42 PIKEVAWIPEMNLLAT--GSW-------------DKTLKYWDTRQP--NPVHTQQLPD---------RCYALT---VR-- 90 (112)
Q Consensus 42 ~v~~~~~~~~~~~~~~--~~~-------------~~~i~~w~~~~~--~~~~~~~~~~---------~~~~~~---~~-- 90 (112)
.|..+...+.+.+.+. |-- .-.+..||+.+. +.++.+..+. ..+.++ +.
T Consensus 88 sV~~v~iD~~~rLWVLDtG~~~~~~~~~~~~~~~~pkLv~~DL~t~~~~li~~y~~p~~~~~~~S~l~di~VD~~~~~~~ 167 (381)
T 3q6k_A 88 SIYQPVIDDCRRLWVVDIGSVEYRSRGAKDYPSHRPAIVAYDLKQPNYPEVVRYYFPTRLVEKPTYFGGFAVDVANPKGD 167 (381)
T ss_dssp CEEEEEECTTCEEEEEECSSCSSCSTTGGGSCCCCCEEEEEESSSTTCCEEEEEECCGGGCCCGGGEEEEEEEESCTTTT
T ss_pred EeeEEEEcCCCcEEEEeCCCcCcCCCccccCCCCCceEEEEECCCCCceeEEEEECCHHhcccCCccceEEEecccCCCC
Confidence 5677777777765543 211 124778999999 8888776542 345555 11
Q ss_pred --CCEEEEEe-CCCcEEEEECcCCC
Q 045566 91 --YPLMVVGT-ADRNLVVFNLQNPQ 112 (112)
Q Consensus 91 --~~~~~~~~-~d~~v~~~d~~~~~ 112 (112)
+.+++... ....|.++|+.+++
T Consensus 168 c~~~~aYItD~~~~gLIVydl~~~~ 192 (381)
T 3q6k_A 168 CSETFVYITNFLRGALFIYDHKKQD 192 (381)
T ss_dssp SCSEEEEEEETTTTEEEEEETTTTE
T ss_pred CCccEEEEEcCCCCcEEEEECCCCc
Confidence 33455544 46679999998763
No 361
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=32.33 E-value=1.1e+02 Score=20.32 Aligned_cols=103 Identities=6% Similarity=-0.118 Sum_probs=51.0
Q ss_pred eeEEEcCCCCEEEEEcCCCcEEEEEcCCCCCcEEEee----ccCCeeEEEEccCCCEEEEeeCCCcEEEeeCCCCCceEE
Q 045566 2 LCSTWKDDGTTVFSGGCDKQVKMWPLLSGGQPVTVAM----HDAPIKEVAWIPEMNLLATGSWDKTLKYWDTRQPNPVHT 77 (112)
Q Consensus 2 ~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~----~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~ 77 (112)
.++...++|+..+.++..+-+..+|..+.+. ..+.. ....+.++....+|...+.. ..| +..++..+.+...-
T Consensus 475 ~~i~~d~~g~lWi~~~t~~Gl~~~d~~~~~~-~~~~~~~~~~~~~~~~i~~d~~g~lWigt-~~G-l~~~~~~~~~~~~~ 551 (758)
T 3ott_A 475 NQIIPDNEGNVWVLLYNNKGIDKINPRTREV-TKLFADELTGEKSPNYLLCDEDGLLWVGF-HGG-VMRINPKDESQQSI 551 (758)
T ss_dssp EEEEECTTSCEEEEETTCSSEEEEETTTTEE-EEECTTTSCGGGCEEEEEECTTSCEEEEE-TTE-EEEECC--CCCCBC
T ss_pred eeEEEcCCCCEEEEccCCCCcEEEeCCCCce-EEecCCCcCCCcccceEEECCCCCEEEEe-cCc-eEEEecCCCceEEe
Confidence 3455566676555333334477778654432 22211 12456788777788777654 444 67777655432110
Q ss_pred ----ecC-CCeEEEEeeCCCEEEEEeCCCcEEEEECcC
Q 045566 78 ----QQL-PDRCYALTVRYPLMVVGTADRNLVVFNLQN 110 (112)
Q Consensus 78 ----~~~-~~~~~~~~~~~~~~~~~~~d~~v~~~d~~~ 110 (112)
+.. .+..+.. +...+..++.+ .+..+|..+
T Consensus 552 ~~~gl~~~~i~~i~~--~~g~lWi~t~~-Gl~~~~~~~ 586 (758)
T 3ott_A 552 SFGSFSNNEILSMTC--VKNSIWVSTTN-GLWIIDRKT 586 (758)
T ss_dssp CCCC---CCEEEEEE--ETTEEEEEESS-CEEEEETTT
T ss_pred cccCCCccceEEEEE--CCCCEEEECCC-CeEEEcCCC
Confidence 111 1122222 33456666644 466667654
No 362
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=31.04 E-value=1.2e+02 Score=20.19 Aligned_cols=57 Identities=9% Similarity=-0.024 Sum_probs=36.9
Q ss_pred CeeEEEEccCCCEEEEeeC------------CCcEEEeeCCCCCceEEecCC----CeEEEEeeCCCEEEEEe
Q 045566 42 PIKEVAWIPEMNLLATGSW------------DKTLKYWDTRQPNPVHTQQLP----DRCYALTVRYPLMVVGT 98 (112)
Q Consensus 42 ~v~~~~~~~~~~~~~~~~~------------~~~i~~w~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~ 98 (112)
....+.|.++|.+.+.... ...+..++..+++...-...+ ...++|+|+++.|++.-
T Consensus 477 sPDnL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P~~aEpnGiafSPD~ktLfV~v 549 (592)
T 4a9v_A 477 SPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVGI 549 (592)
T ss_dssp CEEEEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEEE
T ss_pred CCCceEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCCCCccccCCEECCCCCEEEEEE
Confidence 3457889999988874332 124566666666544434322 37889999998887753
No 363
>4gz8_A Semaphorin-3A; multi-domain, cell-CELL signaling, plexin, glycosilate extracellular, signaling protein; HET: NAG BMA MAN; 3.30A {Mus musculus}
Probab=30.90 E-value=1.2e+02 Score=20.38 Aligned_cols=55 Identities=13% Similarity=0.057 Sum_probs=34.8
Q ss_pred EEEEEcCCCcEE-EEEcCCCC--C-----cEEEe--eccCCeeEEEEccCCCEEEEeeCCCcEEE
Q 045566 12 TVFSGGCDKQVK-MWPLLSGG--Q-----PVTVA--MHDAPIKEVAWIPEMNLLATGSWDKTLKY 66 (112)
Q Consensus 12 ~l~~~~~~~~v~-~~~~~~~~--~-----~~~~~--~~~~~v~~~~~~~~~~~~~~~~~~~~i~~ 66 (112)
.++.|..+|.|+ +....... . +.++. ....+|..+.++++..++..++.++.+++
T Consensus 431 VlFLGT~~G~I~Kvv~~~~~~~~~~~~~~leEi~v~~~~~pI~~L~ld~~~~~LYV~t~~~V~kV 495 (667)
T 4gz8_A 431 VMFIGTDVGTVLKVVSVPKETWHDLEEVLLEEMTVFREPTTISAMELSTKQQQLYIGSTAGVAQL 495 (667)
T ss_dssp EEEEEETTSEEEEEEEEC------CEEEEEEEEECSSSCCCCCEEEEETTTTEEEEEBSSCEEEE
T ss_pred EEEEECCCCeEEEEEEcCCCCccccceEEEEEEeecCCCceeeeEEEcCCCCEEEEEECCEEEEE
Confidence 567788888875 33222211 1 11111 34567889999998889888888877765
No 364
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=30.46 E-value=92 Score=18.81 Aligned_cols=34 Identities=18% Similarity=0.113 Sum_probs=26.1
Q ss_pred cCCeeEEEEccCCCEEEEeeCCCcEEEeeCCCCC
Q 045566 40 DAPIKEVAWIPEMNLLATGSWDKTLKYWDTRQPN 73 (112)
Q Consensus 40 ~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~ 73 (112)
-..-..++|.|++.++++--..+.|+.++...++
T Consensus 31 L~~P~~ia~~pdG~llVter~~G~I~~v~~~~g~ 64 (347)
T 3das_A 31 LNSPWGLAPLPGGDLLVSSRDEATITRVDAKTGR 64 (347)
T ss_dssp CSSEEEEEECTTSCEEEEETTTCEEEEECTTTCC
T ss_pred CCCceEEEEcCCCcEEEEEecCCEEEEEECCCCc
Confidence 4456789999999988777668889988765544
No 365
>2hrv_A 2A cysteine proteinase; hydrolase (cysteine proteinase); 1.95A {Human rhinovirus 2} SCOP: b.47.1.4
Probab=29.78 E-value=54 Score=17.11 Aligned_cols=18 Identities=17% Similarity=0.373 Sum_probs=15.1
Q ss_pred EEEEeCCCcEEEEECcCC
Q 045566 94 MVVGTADRNLVVFNLQNP 111 (112)
Q Consensus 94 ~~~~~~d~~v~~~d~~~~ 111 (112)
+++++.+|.|.+-|+|..
T Consensus 119 ivTaGG~g~VaF~D~R~l 136 (142)
T 2hrv_A 119 IVTAGGDNHVAFIDLRHF 136 (142)
T ss_dssp EEEEECSSEEEEEEGGGG
T ss_pred EEecCCCCEEEEEEchhh
Confidence 678899999999998853
No 366
>3al9_A Plexin-A2; beta-propeller, membrane protein, signaling protein; HET: NAG; 2.10A {Mus musculus} PDB: 3al8_B*
Probab=28.64 E-value=1.2e+02 Score=19.65 Aligned_cols=56 Identities=18% Similarity=0.108 Sum_probs=33.8
Q ss_pred CEEEEEcCCCcEEEEEcCCCCC----cEEEe--eccCCee-EEEEccCCCEEEEeeCCCcEEE
Q 045566 11 TTVFSGGCDKQVKMWPLLSGGQ----PVTVA--MHDAPIK-EVAWIPEMNLLATGSWDKTLKY 66 (112)
Q Consensus 11 ~~l~~~~~~~~v~~~~~~~~~~----~~~~~--~~~~~v~-~~~~~~~~~~~~~~~~~~~i~~ 66 (112)
..++.|..+|.|+-..+..... ...+. ....+|. .+.++++..++..++.++.+++
T Consensus 414 tV~flGT~~G~l~KV~l~~~~~~~~~~e~~~v~~~~~pv~~~l~~~~~~~~Lyv~s~~~V~kv 476 (539)
T 3al9_A 414 SVVFVGTKSGKLKKIRADGPPHGGVQYEMVSVFKDGSPILRDMAFSINQLYLYVMSERQVTRV 476 (539)
T ss_dssp EEEEEEETTSEEEEEEEEETTTEEEEEEEEECCTTCCCCCSCCEECTTSSEEEEECSSEEEEE
T ss_pred EEEEEEcCCCeEEEEEeCCCCccceeEEEEEeecCCCccccceEEccCCCeEEEEecccccee
Confidence 4567788888876444432221 11222 1245674 7888888888888877766654
No 367
>1qiu_A Adenovirus fibre; fibre protein, triple beta-spiral; 2.4A {Human adenovirus 2} SCOP: b.21.1.1 b.83.1.1
Probab=28.51 E-value=84 Score=18.38 Aligned_cols=29 Identities=10% Similarity=0.380 Sum_probs=13.9
Q ss_pred EEEcCCCCEEEEEcCCCcEEEEEcCCCCC
Q 045566 4 STWKDDGTTVFSGGCDKQVKMWPLLSGGQ 32 (112)
Q Consensus 4 ~~~~~~~~~l~~~~~~~~v~~~~~~~~~~ 32 (112)
+.|+.+|...+.-..+....+|......+
T Consensus 63 L~Fd~~G~i~~~n~~~~~~TLWTtpdPsp 91 (264)
T 1qiu_A 63 LSFDNSGAITIGNKNDDKLTLWTTPDPSP 91 (264)
T ss_dssp EEEETTTEEEECCSSEEEEEEESCSSCCS
T ss_pred eeEcCCCCEEEeCCCCCCceecCCCCCCC
Confidence 45555555444222223466776554433
No 368
>1z8r_A Coxsackievirus B4 polyprotein; beta barrel coordinated zinc ION, hydrolase; NMR {Human coxsackievirus B4}
Probab=26.20 E-value=83 Score=16.90 Aligned_cols=18 Identities=6% Similarity=0.063 Sum_probs=15.6
Q ss_pred EEEEeCCCcEEEEECcCC
Q 045566 94 MVVGTADRNLVVFNLQNP 111 (112)
Q Consensus 94 ~~~~~~d~~v~~~d~~~~ 111 (112)
+++++.+|.|.+-|+|..
T Consensus 139 ivTaGG~g~VaF~DiR~l 156 (166)
T 1z8r_A 139 LVTMGGEGVVGFADVRDL 156 (166)
T ss_dssp EEEEECSSEEEEEESTTC
T ss_pred EEecCCCCEEEEEEcchh
Confidence 678999999999999864
No 369
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=25.19 E-value=1e+02 Score=17.68 Aligned_cols=85 Identities=12% Similarity=0.060 Sum_probs=38.6
Q ss_pred CCcEEEEEcCCCCCcEEEeeccCCeeEEEEccCCCEEEEeeCCCcEEEeeCCCCCceE-EecCCCeEEEEeeCCCEEEEE
Q 045566 19 DKQVKMWPLLSGGQPVTVAMHDAPIKEVAWIPEMNLLATGSWDKTLKYWDTRQPNPVH-TQQLPDRCYALTVRYPLMVVG 97 (112)
Q Consensus 19 ~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 97 (112)
|+.|..|-......+-.-......|..++.... +.+.-. |+.++.|-......+- ..........+.....+.+.-
T Consensus 41 ~G~v~~wG~n~~Gqlg~p~~~~~~i~~ia~G~~--hs~~l~-~G~v~~wG~n~~Gqlg~P~~~~~~v~~ia~G~~hs~al 117 (282)
T 3qhy_B 41 GGKVLGWGANLNGQLTMPAATQSGVDAIAAGNY--HSLALK-DGEVIAWGGNEDGQTTVPAEARSGVDAIAAGAWASYAL 117 (282)
T ss_dssp TTEEEEEECCSSSTTSCCGGGGSCCCEEEECSS--EEEEEE-TTEEEEEECCTTSTTCCCGGGSSSEEEEEEETTEEEEE
T ss_pred CCEEEEEeCCCCCCCCCCccCCCCEEEEEeCCC--EEEEEE-CCEEEEeeCCCCCCCCCCcccCCCeEEEECcCCEEEEE
Confidence 788888865433222111112335666665433 222234 7888888654321110 000111222333333344444
Q ss_pred eCCCcEEEEE
Q 045566 98 TADRNLVVFN 107 (112)
Q Consensus 98 ~~d~~v~~~d 107 (112)
. |+.|+.|-
T Consensus 118 ~-~G~v~~wG 126 (282)
T 3qhy_B 118 K-DGKVIAWG 126 (282)
T ss_dssp E-TTEEEEEE
T ss_pred e-CCeEEEec
Confidence 4 77777764
No 370
>2ldu_A Heat shock factor protein 1; structural genomics, northeast structural genomics consortiu DNA-binding, PSI-biology, protein structure initiative; NMR {Homo sapiens}
Probab=24.97 E-value=62 Score=16.32 Aligned_cols=14 Identities=14% Similarity=0.304 Sum_probs=8.5
Q ss_pred eEEEcCCCCEEEEE
Q 045566 3 CSTWKDDGTTVFSG 16 (112)
Q Consensus 3 ~~~~~~~~~~l~~~ 16 (112)
.++|+++|+.+++-
T Consensus 36 iI~W~~~G~sFvV~ 49 (125)
T 2ldu_A 36 LICWSPSGNSFHVF 49 (125)
T ss_dssp TEEECTTSSEEEEC
T ss_pred EEEEcCCCCEEEEe
Confidence 36677777655543
Done!