BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>045567
MAGPDQAAQHSTEVLHQRKSLGQCPLKMALTGFAFAGIIGYFVLYSKKKPEASALDVAKV
TAGVARPENTHPRN

High Scoring Gene Products

Symbol, full name Information P value
AT4G31830 protein from Arabidopsis thaliana 1.3e-13

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  045567
        (74 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2116762 - symbol:AT4G31830 "AT4G31830" species...   177  1.3e-13   1


>TAIR|locus:2116762 [details] [associations]
            symbol:AT4G31830 "AT4G31830" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
            "cellular_component" evidence=ND] [GO:0008150 "biological_process"
            evidence=ND] EMBL:CP002687 GenomeReviews:CT486007_GR EMBL:AL161579
            EMBL:AL049607 EMBL:BT010813 EMBL:BT011290 IPI:IPI00539008
            PIR:T06305 RefSeq:NP_194911.1 UniGene:At.31710 IntAct:Q9SZ50
            PaxDb:Q9SZ50 PRIDE:Q9SZ50 EnsemblPlants:AT4G31830.1 GeneID:829312
            KEGG:ath:AT4G31830 TAIR:At4g31830 eggNOG:NOG287408
            HOGENOM:HOG000243013 InParanoid:Q9SZ50 OMA:TEEWRRN PhylomeDB:Q9SZ50
            ProtClustDB:CLSN2685982 ArrayExpress:Q9SZ50 Genevestigator:Q9SZ50
            Uniprot:Q9SZ50
        Length = 100

 Score = 177 (67.4 bits), Expect = 1.3e-13, P = 1.3e-13
 Identities = 35/60 (58%), Positives = 43/60 (71%)

Query:    14 VLHQRKSLGQCPLKMALTGFAFAGIIGYFVLYSKKKPEASALDVAKVTAGVARPENTHPR 73
             VLHQR++L      MAL G A +G I Y V+Y+KKKPEA+A DVAK   G A+PE+THPR
Sbjct:    40 VLHQRRNLPYSYTTMALAGLAISGAIMYTVMYAKKKPEATATDVAKAATGTAKPEDTHPR 99


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.317   0.131   0.381    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0       74        74   0.00091  102 3  11 22  0.36    29
                                                     29  0.46    29


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  462 (49 KB)
  Total size of DFA:  82 KB (2065 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  7.89u 0.12s 8.01t   Elapsed:  00:00:01
  Total cpu time:  7.89u 0.12s 8.01t   Elapsed:  00:00:01
  Start:  Thu May  9 18:37:20 2013   End:  Thu May  9 18:37:21 2013

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