Query 045568
Match_columns 379
No_of_seqs 329 out of 2419
Neff 7.8
Searched_HMMs 46136
Date Fri Mar 29 03:23:31 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/045568.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/045568hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PF01657 Stress-antifung: Salt 99.9 5.5E-25 1.2E-29 179.6 6.5 103 30-136 1-106 (106)
2 PF01657 Stress-antifung: Salt 99.9 6.4E-23 1.4E-27 167.3 9.2 90 156-246 16-106 (106)
3 KOG1187 Serine/threonine prote 98.1 1.7E-06 3.6E-11 85.6 2.4 61 273-334 290-352 (361)
4 PF11883 DUF3403: Domain of un 95.6 0.018 3.9E-07 39.7 3.7 44 335-379 3-48 (48)
5 PLN00113 leucine-rich repeat r 94.5 0.021 4.5E-07 63.7 2.3 50 285-334 900-951 (968)
6 cd05038 PTKc_Jak_rpt2 Catalyti 88.6 0.42 9E-06 44.4 3.4 31 304-334 253-283 (284)
7 cd05081 PTKc_Jak2_Jak3_rpt2 Ca 85.0 0.9 1.9E-05 42.3 3.5 30 305-334 254-283 (284)
8 cd05051 PTKc_DDR Catalytic dom 84.3 0.98 2.1E-05 42.3 3.4 29 304-332 267-295 (296)
9 cd05068 PTKc_Frk_like Catalyti 84.1 1 2.2E-05 41.4 3.4 30 304-333 231-260 (261)
10 cd05097 PTKc_DDR_like Catalyti 83.8 1 2.2E-05 42.4 3.3 28 305-332 267-294 (295)
11 cd05148 PTKc_Srm_Brk Catalytic 83.3 1.2 2.7E-05 40.7 3.6 29 305-333 232-260 (261)
12 cd05112 PTKc_Itk Catalytic dom 82.9 1.2 2.6E-05 40.7 3.3 29 304-332 228-256 (256)
13 cd05063 PTKc_EphR_A2 Catalytic 82.7 1.3 2.7E-05 40.9 3.4 30 304-333 237-266 (268)
14 cd05045 PTKc_RET Catalytic dom 81.7 1.4 2.9E-05 41.4 3.3 30 305-334 257-286 (290)
15 cd05094 PTKc_TrkC Catalytic do 81.6 1.1 2.3E-05 42.2 2.6 30 305-334 253-282 (291)
16 cd08528 STKc_Nek10 Catalytic d 81.5 1.7 3.6E-05 40.1 3.8 28 305-332 241-268 (269)
17 cd05053 PTKc_FGFR Catalytic do 81.4 1.3 2.9E-05 41.4 3.2 31 304-334 261-291 (293)
18 cd05095 PTKc_DDR2 Catalytic do 81.4 1.6 3.5E-05 41.0 3.8 29 304-332 267-295 (296)
19 cd05114 PTKc_Tec_Rlk Catalytic 81.4 1.5 3.2E-05 40.1 3.4 27 305-331 229-255 (256)
20 cd05052 PTKc_Abl Catalytic dom 81.3 1.6 3.4E-05 40.2 3.5 29 305-333 233-261 (263)
21 cd05048 PTKc_Ror Catalytic Dom 81.3 1.4 3E-05 40.9 3.2 30 304-333 253-282 (283)
22 cd05080 PTKc_Tyk2_rpt2 Catalyt 81.2 1.2 2.7E-05 41.4 2.8 31 304-334 251-281 (283)
23 cd05050 PTKc_Musk Catalytic do 81.1 1.7 3.7E-05 40.6 3.7 29 304-332 259-287 (288)
24 cd05072 PTKc_Lyn Catalytic dom 80.9 1.7 3.6E-05 39.9 3.5 29 305-333 232-260 (261)
25 cd05033 PTKc_EphR Catalytic do 80.5 1.6 3.5E-05 40.1 3.4 29 305-333 236-264 (266)
26 cd05096 PTKc_DDR1 Catalytic do 79.9 1.8 3.8E-05 40.9 3.4 28 305-332 276-303 (304)
27 cd05059 PTKc_Tec_like Catalyti 79.9 1.7 3.6E-05 39.9 3.2 27 305-331 229-255 (256)
28 PF07714 Pkinase_Tyr: Protein 79.6 1.4 3.1E-05 40.7 2.6 27 305-331 233-259 (259)
29 cd05102 PTKc_VEGFR3 Catalytic 79.3 1.6 3.5E-05 42.0 3.0 30 305-334 305-334 (338)
30 cd05084 PTKc_Fes Catalytic dom 78.9 1.9 4.2E-05 39.2 3.3 28 305-332 224-251 (252)
31 cd05085 PTKc_Fer Catalytic dom 78.8 2.2 4.8E-05 38.7 3.6 29 304-332 221-249 (250)
32 cd05060 PTKc_Syk_like Catalyti 78.7 2.1 4.5E-05 39.2 3.4 30 305-334 226-255 (257)
33 cd05062 PTKc_IGF-1R Catalytic 78.6 1.9 4E-05 40.1 3.1 28 305-332 249-276 (277)
34 cd05104 PTKc_Kit Catalytic dom 78.4 1.7 3.6E-05 43.0 2.8 29 305-333 345-373 (375)
35 cd05116 PTKc_Syk Catalytic dom 78.1 2.1 4.6E-05 39.2 3.3 28 306-333 227-254 (257)
36 cd05078 PTK_Jak2_Jak3_rpt1 Pse 77.4 2 4.4E-05 39.4 2.9 28 305-332 231-258 (258)
37 cd05035 PTKc_Axl_like Catalyti 77.4 2.2 4.8E-05 39.1 3.2 30 304-333 242-271 (273)
38 cd05058 PTKc_Met_Ron Catalytic 77.4 2.1 4.5E-05 39.2 3.0 30 305-334 230-259 (262)
39 cd05054 PTKc_VEGFR Catalytic d 77.1 2.1 4.6E-05 41.4 3.1 31 304-334 303-333 (337)
40 cd05075 PTKc_Axl Catalytic dom 76.8 2.6 5.6E-05 38.8 3.5 29 305-333 242-270 (272)
41 cd05039 PTKc_Csk_like Catalyti 76.7 2.6 5.6E-05 38.5 3.4 29 305-333 227-255 (256)
42 cd05113 PTKc_Btk_Bmx Catalytic 76.3 2.7 5.9E-05 38.6 3.5 29 304-332 228-256 (256)
43 cd05079 PTKc_Jak1_rpt2 Catalyt 76.3 2.5 5.4E-05 39.4 3.3 31 304-334 253-283 (284)
44 cd05091 PTKc_Ror2 Catalytic do 76.2 2.8 6E-05 39.0 3.5 27 306-332 255-281 (283)
45 cd05047 PTKc_Tie Catalytic dom 75.7 2.4 5.1E-05 39.3 2.9 30 305-334 239-268 (270)
46 cd08229 STKc_Nek7 Catalytic do 75.5 3.1 6.7E-05 38.1 3.6 29 305-333 236-264 (267)
47 cd05066 PTKc_EphR_A Catalytic 75.4 2.7 5.9E-05 38.7 3.2 29 305-333 237-265 (267)
48 cd05074 PTKc_Tyro3 Catalytic d 75.2 2.7 5.9E-05 38.7 3.2 31 304-334 242-272 (273)
49 cd05093 PTKc_TrkB Catalytic do 75.2 2.4 5.2E-05 39.7 2.8 30 305-334 250-279 (288)
50 cd05065 PTKc_EphR_B Catalytic 74.9 2.8 6E-05 38.6 3.1 29 305-333 239-267 (269)
51 cd05036 PTKc_ALK_LTK Catalytic 74.9 3.2 7E-05 38.5 3.6 28 305-332 249-276 (277)
52 cd05082 PTKc_Csk Catalytic dom 74.7 3.1 6.7E-05 38.0 3.4 29 305-333 227-255 (256)
53 cd05043 PTK_Ryk Pseudokinase d 74.2 2.5 5.3E-05 39.3 2.6 30 305-334 247-276 (280)
54 cd05101 PTKc_FGFR2 Catalytic d 73.7 2.7 5.8E-05 39.7 2.7 30 305-334 267-296 (304)
55 cd05044 PTKc_c-ros Catalytic d 73.6 3.9 8.5E-05 37.5 3.8 28 305-332 241-268 (269)
56 PHA02988 hypothetical protein; 73.4 3.5 7.7E-05 38.7 3.5 29 306-334 251-279 (283)
57 cd08224 STKc_Nek6_Nek7 Catalyt 73.3 3.7 8E-05 37.5 3.5 30 305-334 236-265 (267)
58 cd05083 PTKc_Chk Catalytic dom 73.2 3.6 7.8E-05 37.5 3.4 29 305-333 225-253 (254)
59 cd05100 PTKc_FGFR3 Catalytic d 73.1 6.1 0.00013 37.9 5.2 31 305-335 264-294 (334)
60 cd05076 PTK_Tyk2_rpt1 Pseudoki 72.5 3.3 7E-05 38.6 3.0 28 305-332 247-274 (274)
61 cd05070 PTKc_Fyn_Yrk Catalytic 72.4 3.9 8.4E-05 37.4 3.5 29 305-333 231-259 (260)
62 cd08228 STKc_Nek6 Catalytic do 72.4 3.9 8.5E-05 37.5 3.5 30 305-334 236-265 (267)
63 cd05049 PTKc_Trk Catalytic dom 72.3 4.1 8.9E-05 37.6 3.7 28 305-332 252-279 (280)
64 cd05103 PTKc_VEGFR2 Catalytic 72.2 3.1 6.8E-05 40.3 2.9 30 305-334 310-339 (343)
65 cd05032 PTKc_InsR_like Catalyt 71.8 3.9 8.4E-05 37.7 3.3 29 304-332 248-276 (277)
66 cd05041 PTKc_Fes_like Catalyti 71.8 3.8 8.3E-05 37.1 3.2 28 305-332 223-250 (251)
67 cd05069 PTKc_Yes Catalytic dom 71.8 4.4 9.5E-05 37.1 3.7 29 305-333 231-259 (260)
68 cd05098 PTKc_FGFR1 Catalytic d 71.4 3.9 8.5E-05 38.7 3.3 30 305-334 270-299 (307)
69 cd05061 PTKc_InsR Catalytic do 71.0 3.6 7.9E-05 38.4 3.0 31 304-334 248-278 (288)
70 cd05071 PTKc_Src Catalytic dom 70.9 4.6 0.0001 37.1 3.6 30 304-333 230-259 (262)
71 cd05040 PTKc_Ack_like Catalyti 70.2 5.2 0.00011 36.4 3.8 28 305-332 229-256 (257)
72 cd05089 PTKc_Tie1 Catalytic do 70.1 4.2 9.1E-05 38.2 3.2 30 305-334 246-275 (297)
73 cd05055 PTKc_PDGFR Catalytic d 70.1 4.4 9.6E-05 38.3 3.4 29 305-333 272-300 (302)
74 cd05073 PTKc_Hck Catalytic dom 69.9 4.8 0.0001 36.8 3.5 29 305-333 231-259 (260)
75 cd05064 PTKc_EphR_A10 Catalyti 69.8 4.4 9.5E-05 37.4 3.2 29 305-333 236-264 (266)
76 cd00192 PTKc Catalytic domain 69.8 4.5 9.8E-05 36.5 3.2 28 305-332 235-262 (262)
77 cd05090 PTKc_Ror1 Catalytic do 69.6 4.9 0.00011 37.3 3.5 29 305-333 254-282 (283)
78 PF13956 Ibs_toxin: Toxin Ibs, 69.5 2.4 5.2E-05 22.8 0.7 15 1-15 2-16 (19)
79 cd05067 PTKc_Lck_Blk Catalytic 68.6 5 0.00011 36.7 3.3 29 305-333 231-259 (260)
80 cd05106 PTKc_CSF-1R Catalytic 68.1 4.5 9.8E-05 39.9 3.1 29 305-333 343-371 (374)
81 cd05111 PTK_HER3 Pseudokinase 67.9 5.7 0.00012 36.9 3.6 30 305-334 239-268 (279)
82 cd05037 PTK_Jak_rpt1 Pseudokin 67.7 4.7 0.0001 36.6 2.9 29 304-332 231-259 (259)
83 cd05077 PTK_Jak1_rpt1 Pseudoki 67.0 5 0.00011 37.0 3.0 28 305-332 235-262 (262)
84 cd05092 PTKc_TrkA Catalytic do 66.3 5.5 0.00012 37.0 3.2 28 305-332 252-279 (280)
85 cd05099 PTKc_FGFR4 Catalytic d 65.4 6.5 0.00014 37.3 3.5 30 305-334 264-293 (314)
86 cd05088 PTKc_Tie2 Catalytic do 64.3 6 0.00013 37.4 3.0 30 305-334 251-280 (303)
87 cd05034 PTKc_Src_like Catalyti 63.9 7.5 0.00016 35.4 3.5 29 305-333 232-260 (261)
88 smart00219 TyrKc Tyrosine kina 63.9 6.4 0.00014 35.5 3.0 27 305-331 232-258 (258)
89 cd08217 STKc_Nek2 Catalytic do 62.7 6.4 0.00014 35.6 2.8 27 304-330 236-262 (265)
90 cd05105 PTKc_PDGFR_alpha Catal 62.0 6.2 0.00013 39.5 2.7 30 305-334 368-397 (400)
91 cd05110 PTKc_HER4 Catalytic do 61.5 8 0.00017 36.5 3.3 30 305-334 239-268 (303)
92 smart00220 S_TKc Serine/Threon 61.0 7.9 0.00017 34.2 3.0 26 304-329 215-240 (244)
93 cd05108 PTKc_EGFR Catalytic do 60.8 7.9 0.00017 36.8 3.2 30 305-334 239-268 (316)
94 cd05046 PTK_CCK4 Pseudokinase 60.7 9.5 0.00021 35.1 3.6 28 305-332 247-274 (275)
95 smart00750 KIND kinase non-cat 59.7 9 0.0002 32.7 3.1 28 305-332 140-167 (176)
96 cd05107 PTKc_PDGFR_beta Cataly 59.3 7.5 0.00016 38.9 2.8 29 305-333 370-398 (401)
97 cd08529 STKc_FA2-like Catalyti 58.9 9 0.00019 34.6 3.1 26 305-330 228-253 (256)
98 cd05056 PTKc_FAK Catalytic dom 58.6 7.9 0.00017 35.6 2.6 30 305-334 236-265 (270)
99 cd07835 STKc_CDK1_like Catalyt 57.9 7.6 0.00016 35.9 2.4 25 305-329 255-279 (283)
100 cd05115 PTKc_Zap-70 Catalytic 57.9 10 0.00022 34.7 3.3 29 305-333 226-254 (257)
101 cd06642 STKc_STK25-YSK1 Cataly 57.5 10 0.00023 35.0 3.3 26 305-330 228-253 (277)
102 cd08218 STKc_Nek1 Catalytic do 57.2 8.9 0.00019 34.8 2.7 25 305-329 228-252 (256)
103 cd07846 STKc_CDKL2_3 Catalytic 56.5 9.1 0.0002 35.4 2.7 25 305-329 258-282 (286)
104 cd06620 PKc_MAPKK_Byr1_like Ca 54.6 9.4 0.0002 35.5 2.5 27 305-331 241-267 (284)
105 cd05109 PTKc_HER2 Catalytic do 53.6 13 0.00028 34.3 3.2 30 305-334 239-268 (279)
106 cd06621 PKc_MAPKK_Pek1_like Ca 52.9 14 0.00029 34.5 3.3 26 305-330 241-266 (287)
107 cd08223 STKc_Nek4 Catalytic do 52.0 13 0.00028 33.6 2.9 25 305-329 229-253 (257)
108 cd07840 STKc_CDK9_like Catalyt 51.4 13 0.00029 34.1 2.9 26 304-329 258-283 (287)
109 cd07830 STKc_MAK_like Catalyti 51.3 14 0.0003 34.1 3.0 26 304-329 254-279 (283)
110 cd08220 STKc_Nek8 Catalytic do 51.3 12 0.00027 33.7 2.7 25 305-329 228-252 (256)
111 cd05086 PTKc_Aatyk2 Catalytic 51.0 15 0.00032 33.8 3.2 21 311-332 247-267 (268)
112 cd06624 STKc_ASK Catalytic dom 50.9 15 0.00032 33.7 3.1 25 305-329 240-264 (268)
113 cd07833 STKc_CDKL Catalytic do 50.5 11 0.00024 34.7 2.3 25 305-329 260-284 (288)
114 cd06612 STKc_MST1_2 Catalytic 50.4 12 0.00026 33.8 2.4 24 306-329 229-252 (256)
115 cd07841 STKc_CDK7 Catalytic do 49.9 21 0.00046 33.2 4.1 26 305-330 257-282 (298)
116 cd06638 STKc_myosinIIIA Cataly 49.8 16 0.00035 33.7 3.2 25 306-330 259-283 (286)
117 cd06606 STKc_MAPKKK Catalytic 49.6 15 0.00033 32.8 3.0 25 305-329 232-256 (260)
118 cd05118 STKc_CMGC Catalytic do 48.5 17 0.00036 33.4 3.1 25 305-329 255-279 (283)
119 cd00180 PKc Catalytic domain o 48.1 16 0.00034 31.1 2.7 27 304-330 188-214 (215)
120 cd08225 STKc_Nek5 Catalytic do 47.3 16 0.00034 33.0 2.7 24 306-329 230-253 (257)
121 KOG2345 Serine/threonine prote 47.1 22 0.00048 33.5 3.5 29 305-333 271-299 (302)
122 cd05087 PTKc_Aatyk1_Aatyk3 Cat 45.3 21 0.00044 32.8 3.2 21 311-332 248-268 (269)
123 cd07831 STKc_MOK Catalytic dom 45.2 19 0.00041 33.1 2.9 26 304-329 253-278 (282)
124 cd06640 STKc_MST4 Catalytic do 45.2 20 0.00043 33.1 3.1 27 304-330 227-253 (277)
125 cd06608 STKc_myosinIII_like Ca 45.1 17 0.00037 33.1 2.6 25 305-329 247-271 (275)
126 cd05122 PKc_STE Catalytic doma 44.6 17 0.00037 32.3 2.5 25 305-329 226-250 (253)
127 cd07842 STKc_CDK8_like Catalyt 44.0 19 0.0004 33.8 2.7 25 305-329 288-312 (316)
128 cd06637 STKc_TNIK Catalytic do 43.6 21 0.00045 32.7 2.9 25 305-329 244-268 (272)
129 cd07847 STKc_CDKL1_4 Catalytic 43.5 20 0.00043 33.0 2.8 25 305-329 258-282 (286)
130 PF00069 Pkinase: Protein kina 43.4 17 0.00036 32.8 2.2 26 304-329 231-256 (260)
131 PF07172 GRP: Glycine rich pro 43.3 17 0.00036 28.9 1.8 18 1-18 1-18 (95)
132 cd06609 STKc_MST3_like Catalyt 43.2 20 0.00044 32.9 2.8 25 306-330 227-251 (274)
133 cd06629 STKc_MAPKKK_Bck1_like 42.9 20 0.00044 32.7 2.8 25 305-329 244-268 (272)
134 cd06641 STKc_MST3 Catalytic do 42.7 23 0.00049 32.7 3.0 26 305-330 228-253 (277)
135 cd06615 PKc_MEK Catalytic doma 42.6 18 0.0004 34.1 2.4 25 306-330 263-287 (308)
136 cd08221 STKc_Nek9 Catalytic do 42.5 22 0.00047 32.2 2.9 27 305-331 228-254 (256)
137 cd06639 STKc_myosinIIIB Cataly 42.5 19 0.0004 33.5 2.4 25 305-329 262-286 (291)
138 cd07860 STKc_CDK2_3 Catalytic 42.0 22 0.00047 32.8 2.8 23 307-329 258-280 (284)
139 cd08226 PK_STRAD_beta Pseudoki 42.0 29 0.00062 33.1 3.7 27 303-329 281-307 (328)
140 cd06619 PKc_MKK5 Catalytic dom 41.4 19 0.00042 33.3 2.3 25 306-330 229-253 (279)
141 cd07861 STKc_CDK1_euk Catalyti 41.4 20 0.00042 33.1 2.4 23 307-329 259-281 (285)
142 cd06646 STKc_MAP4K5 Catalytic 41.1 19 0.00041 32.9 2.2 26 306-331 241-266 (267)
143 cd07838 STKc_CDK4_6_like Catal 40.2 26 0.00056 32.2 3.0 25 305-329 259-283 (287)
144 cd08219 STKc_Nek3 Catalytic do 40.1 24 0.00052 31.9 2.8 25 306-330 228-252 (255)
145 cd06610 STKc_OSR1_SPAK Catalyt 40.1 25 0.00055 31.8 2.9 25 305-329 239-263 (267)
146 cd06626 STKc_MEKK4 Catalytic d 40.0 25 0.00055 31.8 2.9 24 306-329 237-260 (264)
147 cd06632 STKc_MEKK1_plant Catal 40.0 23 0.00051 31.8 2.6 24 306-329 231-254 (258)
148 PLN00009 cyclin-dependent kina 39.6 23 0.00051 32.9 2.6 24 306-329 260-283 (294)
149 cd08216 PK_STRAD Pseudokinase 39.4 24 0.00053 33.1 2.8 26 305-330 270-295 (314)
150 cd06649 PKc_MEK2 Catalytic dom 39.2 25 0.00054 33.7 2.8 25 306-330 277-301 (331)
151 cd06605 PKc_MAPKK Catalytic do 38.9 29 0.00062 31.5 3.1 24 306-329 233-256 (265)
152 cd06651 STKc_MEKK3 Catalytic d 38.9 22 0.00049 32.5 2.3 23 307-329 238-260 (266)
153 cd07832 STKc_CCRK Catalytic do 38.9 27 0.00058 32.1 2.9 26 304-329 256-281 (286)
154 cd07858 STKc_TEY_MAPK_plant Ca 38.6 23 0.00049 34.0 2.4 26 305-330 266-291 (337)
155 cd06627 STKc_Cdc7_like Catalyt 38.3 22 0.00048 31.8 2.2 25 305-329 226-250 (254)
156 cd05057 PTKc_EGFR_like Catalyt 37.9 34 0.00073 31.5 3.4 30 305-334 239-268 (279)
157 cd08530 STKc_CNK2-like Catalyt 37.7 30 0.00066 31.0 3.0 25 305-329 228-252 (256)
158 cd06616 PKc_MKK4 Catalytic dom 37.7 26 0.00057 32.4 2.6 26 305-330 242-267 (288)
159 cd07852 STKc_MAPK15 Catalytic 37.6 28 0.0006 33.3 2.8 26 305-330 270-295 (337)
160 cd06618 PKc_MKK7 Catalytic dom 37.5 26 0.00057 32.7 2.6 26 305-330 248-273 (296)
161 cd08227 PK_STRAD_alpha Pseudok 36.9 23 0.00051 33.7 2.2 25 305-329 282-306 (327)
162 cd05042 PTKc_Aatyk Catalytic d 36.6 35 0.00075 31.2 3.2 22 310-332 247-268 (269)
163 cd06607 STKc_TAO Catalytic dom 36.5 28 0.00061 32.7 2.7 26 305-330 242-267 (307)
164 cd07866 STKc_BUR1 Catalytic do 36.5 28 0.00061 32.4 2.6 26 304-329 282-307 (311)
165 cd06631 STKc_YSK4 Catalytic do 36.4 30 0.00065 31.5 2.8 24 306-329 238-261 (265)
166 cd07829 STKc_CDK_like Catalyti 36.3 32 0.0007 31.4 3.0 25 305-329 254-278 (282)
167 cd06613 STKc_MAP4K3_like Catal 36.0 26 0.00056 31.7 2.3 25 305-329 235-259 (262)
168 cd06917 STKc_NAK1_like Catalyt 35.5 36 0.00077 31.2 3.1 26 305-330 230-255 (277)
169 cd07862 STKc_CDK6 Catalytic do 35.2 30 0.00064 32.0 2.6 24 306-329 263-286 (290)
170 cd06623 PKc_MAPKK_plant_like C 34.8 36 0.00078 30.7 3.0 26 305-330 231-256 (264)
171 cd07865 STKc_CDK9 Catalytic do 34.6 30 0.00066 32.2 2.5 25 305-329 282-306 (310)
172 cd08215 STKc_Nek Catalytic dom 34.1 33 0.00073 30.6 2.7 25 305-329 230-254 (258)
173 cd07844 STKc_PCTAIRE_like Cata 33.6 32 0.00069 31.9 2.5 25 305-329 263-287 (291)
174 cd06635 STKc_TAO1 Catalytic do 33.2 37 0.00079 32.2 2.9 26 306-331 253-278 (317)
175 cd07849 STKc_ERK1_2_like Catal 33.1 31 0.00067 33.0 2.3 26 305-330 267-292 (336)
176 cd07837 STKc_CdkB_plant Cataly 33.0 33 0.00073 31.7 2.5 24 306-329 267-290 (295)
177 cd06650 PKc_MEK1 Catalytic dom 33.0 40 0.00087 32.3 3.1 24 306-329 275-298 (333)
178 cd07843 STKc_CDC2L1 Catalytic 32.9 37 0.00079 31.5 2.8 24 306-329 266-289 (293)
179 cd07864 STKc_CDK12 Catalytic d 32.8 34 0.00074 31.8 2.6 25 305-329 274-298 (302)
180 cd08222 STKc_Nek11 Catalytic d 32.6 40 0.00086 30.5 2.9 25 305-329 232-256 (260)
181 KOG0194 Protein tyrosine kinas 32.1 43 0.00092 34.5 3.2 33 300-335 389-421 (474)
182 cd07839 STKc_CDK5 Catalytic do 32.1 36 0.00079 31.3 2.6 24 306-329 257-280 (284)
183 cd06656 STKc_PAK3 Catalytic do 31.7 37 0.00081 31.8 2.6 24 306-329 245-268 (297)
184 cd05583 STKc_MSK_N N-terminal 31.3 33 0.00071 31.8 2.2 29 306-334 239-267 (288)
185 cd07851 STKc_p38 Catalytic dom 31.2 37 0.0008 32.7 2.5 25 305-329 273-297 (343)
186 cd07859 STKc_TDY_MAPK_plant Ca 31.1 39 0.00084 32.1 2.7 25 306-330 266-290 (338)
187 cd06654 STKc_PAK1 Catalytic do 30.4 44 0.00095 31.3 2.9 25 306-330 246-270 (296)
188 cd07874 STKc_JNK3 Catalytic do 30.4 41 0.00088 32.5 2.7 26 305-330 286-311 (355)
189 KOG0192 Tyrosine kinase specif 30.2 45 0.00098 33.1 3.0 30 305-334 274-303 (362)
190 cd06645 STKc_MAP4K3 Catalytic 30.1 43 0.00094 30.4 2.7 24 306-329 241-264 (267)
191 cd06611 STKc_SLK_like Catalyti 30.1 38 0.00083 31.1 2.4 24 306-329 238-261 (280)
192 cd06628 STKc_MAPKKK_Byr2_like 30.0 47 0.001 30.1 3.0 24 306-329 240-263 (267)
193 cd06614 STKc_PAK Catalytic dom 29.9 44 0.00096 30.8 2.8 26 305-330 245-270 (286)
194 cd05579 STKc_MAST_like Catalyt 29.3 35 0.00075 30.7 1.9 29 305-333 229-257 (265)
195 cd07857 STKc_MPK1 Catalytic do 29.2 47 0.001 31.7 2.9 25 305-329 267-291 (332)
196 cd07836 STKc_Pho85 Catalytic d 28.8 45 0.00098 30.6 2.6 24 306-329 257-280 (284)
197 cd07863 STKc_CDK4 Catalytic do 28.5 48 0.001 30.5 2.7 24 306-329 261-284 (288)
198 cd06643 STKc_SLK Catalytic dom 28.4 43 0.00093 30.8 2.4 24 306-329 238-261 (282)
199 cd07879 STKc_p38delta_MAPK13 C 28.2 43 0.00094 32.2 2.4 24 306-329 273-296 (342)
200 cd06648 STKc_PAK_II Catalytic 28.0 44 0.00096 31.0 2.4 25 305-329 244-268 (285)
201 cd06644 STKc_STK10_LOK Catalyt 27.7 51 0.0011 30.6 2.8 25 305-329 244-268 (292)
202 cd07855 STKc_ERK5 Catalytic do 27.5 51 0.0011 31.5 2.8 26 305-330 269-294 (334)
203 cd06634 STKc_TAO2 Catalytic do 27.4 59 0.0013 30.6 3.2 26 306-331 243-268 (308)
204 cd07870 STKc_PFTAIRE2 Catalyti 27.0 51 0.0011 30.5 2.7 24 306-329 264-287 (291)
205 PF08105 Antimicrobial10: Metc 26.5 71 0.0015 21.9 2.4 25 1-25 1-25 (52)
206 cd06625 STKc_MEKK3_like Cataly 26.3 59 0.0013 29.4 2.9 25 306-330 236-260 (263)
207 PLN00034 mitogen-activated pro 26.3 53 0.0011 31.7 2.7 25 306-330 304-328 (353)
208 cd06633 STKc_TAO3 Catalytic do 26.3 51 0.0011 31.2 2.5 25 306-330 249-273 (313)
209 cd07850 STKc_JNK Catalytic dom 25.7 51 0.0011 31.8 2.5 25 305-329 286-310 (353)
210 cd07856 STKc_Sty1_Hog1 Catalyt 25.7 56 0.0012 31.2 2.7 26 305-330 263-288 (328)
211 PF08194 DIM: DIM protein; In 25.4 71 0.0015 20.6 2.2 7 27-33 26-32 (36)
212 PLN00181 protein SPA1-RELATED; 25.4 52 0.0011 36.0 2.7 25 305-329 240-264 (793)
213 cd07834 STKc_MAPK Catalytic do 24.9 62 0.0013 30.6 2.9 25 306-330 265-289 (330)
214 cd06655 STKc_PAK2 Catalytic do 24.8 56 0.0012 30.6 2.5 24 306-329 245-268 (296)
215 PTZ00024 cyclin-dependent prot 24.7 62 0.0013 30.8 2.8 26 305-330 288-313 (335)
216 cd07848 STKc_CDKL5 Catalytic d 24.6 62 0.0014 29.8 2.7 24 306-329 260-283 (287)
217 cd06630 STKc_MEKK1 Catalytic d 23.9 65 0.0014 29.1 2.7 25 305-329 239-263 (268)
218 cd06622 PKc_MAPKK_PBS2_like Ca 23.7 73 0.0016 29.3 3.0 24 306-329 238-261 (286)
219 cd06617 PKc_MKK3_6 Catalytic d 23.5 62 0.0013 29.6 2.5 24 306-329 237-260 (283)
220 cd06636 STKc_MAP4K4_6 Catalyti 23.5 63 0.0014 29.7 2.5 25 305-329 254-278 (282)
221 PHA03209 serine/threonine kina 23.4 57 0.0012 31.6 2.3 21 309-329 330-350 (357)
222 cd07873 STKc_PCTAIRE1 Catalyti 23.3 62 0.0013 30.2 2.5 23 307-329 263-285 (301)
223 PF02950 Conotoxin: Conotoxin; 22.9 28 0.00061 25.8 0.0 15 1-15 1-15 (75)
224 cd07853 STKc_NLK Catalytic dom 22.7 64 0.0014 31.4 2.5 26 305-330 263-288 (372)
225 cd07867 STKc_CDC2L6 Catalytic 21.9 73 0.0016 29.8 2.7 24 306-329 290-313 (317)
226 cd07854 STKc_MAPK4_6 Catalytic 21.8 70 0.0015 30.7 2.6 25 305-329 275-299 (342)
227 cd07845 STKc_CDK10 Catalytic d 21.5 1.3E+02 0.0027 28.2 4.2 23 307-329 267-289 (309)
228 cd06658 STKc_PAK5 Catalytic do 20.7 81 0.0017 29.4 2.7 23 308-330 250-272 (292)
No 1
>PF01657 Stress-antifung: Salt stress response/antifungal; InterPro: IPR002902 This domain is found in plants and has no known function. The structure of this domain is known and it is thought to be involved in antifungal responses in plants []. Two copies of this domain are also found together in cysteine-rich protein kinases and cysteine-rich repeat secretory proteins. The domain contains four conserved cysteines.; PDB: 3A2E_D.
Probab=99.91 E-value=5.5e-25 Score=179.59 Aligned_cols=103 Identities=42% Similarity=0.835 Sum_probs=78.2
Q ss_pred CCCCC-C-CCcc-CCCChHHHHHHHHHHHHhhcccCCCCCCCCCCceecccCCCCCeEEEEEEccCCCCccchHHHHHHH
Q 045568 30 GHVCK-D-GMNF-NSNSTYQSNLKLLLSTLRSNATHGSRDKISDGFYNATAGQDLDKVSGLFLCRGDVRRETCQDCVNFA 106 (379)
Q Consensus 30 ~~~C~-~-~~~~-~~~s~~~~nl~~l~~~l~~~~~~~~~~~~~~~f~~~~~g~~~~~vygl~~C~~d~~~~~C~~C~~~a 106 (379)
|+.|+ + .++| +++++|++||+.||+.|+.+++.++ +.+|++.+.|.++++|||++||++|+++++|..||+.|
T Consensus 1 ~~~Cs~~~~~~~~~~~~~f~~~l~~ll~~l~~~a~~~~----~~~f~~~~~~~~~~~vYgl~qC~~Dls~~dC~~Cl~~a 76 (106)
T PF01657_consen 1 WHFCSSNTNNNYTTDNSTFEQNLNSLLSSLVSNAASSS----SKGFATGSAGSGPDTVYGLAQCRGDLSPSDCRACLADA 76 (106)
T ss_dssp ---E---SSB----TT-THHHHHHHHHHHHHHHGGGTT-----TEEEEEE--ST---EEEEEEE-TTS-HHHHHHHHHHH
T ss_pred CCcCCCCCCCCcCCCCchHHHHHHHHHHHHHHHHhhcc----ccCcEEeecCCCCCeEEEEEEcCCCCChhhhHHHHHHH
Confidence 57898 3 4567 6788899999999999999877620 25799998898999999999999999999999999999
Q ss_pred HhhccccCCCCceEEEEcccccceeccCCc
Q 045568 107 TSDLPQRCPVQKGAVIWYRECLLHYSNYSF 136 (379)
Q Consensus 107 ~~~~~~~C~~~~~~~~~~~~C~lrys~~~f 136 (379)
+..+.+.|+..++|++|++.|+|||++++|
T Consensus 77 ~~~~~~~C~~~~g~~v~~~~C~lRY~~~~F 106 (106)
T PF01657_consen 77 VANISSCCPGSRGGRVWYDSCFLRYENYPF 106 (106)
T ss_dssp HCCHHHHTTSBSSEEEEESSEEEEEESS--
T ss_pred HHHHHHhCCCCceEEEECCCEEEEEECCCC
Confidence 999999999999999999999999999988
No 2
>PF01657 Stress-antifung: Salt stress response/antifungal; InterPro: IPR002902 This domain is found in plants and has no known function. The structure of this domain is known and it is thought to be involved in antifungal responses in plants []. Two copies of this domain are also found together in cysteine-rich protein kinases and cysteine-rich repeat secretory proteins. The domain contains four conserved cysteines.; PDB: 3A2E_D.
Probab=99.88 E-value=6.4e-23 Score=167.35 Aligned_cols=90 Identities=42% Similarity=0.854 Sum_probs=74.9
Q ss_pred hhHHHHHHHHHHHHHHHHhccC-CCceeeeccCCCCCCceEEEEEeecCCChhchhhHHHHHHHHhhhhcCCccceEEEc
Q 045568 156 NRSFGKQVRNLMDEAVNQALST-PKMFGTAKEDYSDFPTLYGLAQCTQNLSPDQCRNCLGDAISQLVECCKVRQGGQLLY 234 (379)
Q Consensus 156 ~~~f~~~l~~ll~~l~~~a~~s-~~~fa~~~~~~~~~~~vYglaQC~~Dls~~dC~~CL~~a~~~i~~~c~~~~g~~v~~ 234 (379)
++.|+.++..||..|+..++.+ +.+|++++.+. ++++||||+||++|+++++|+.||+.++.+|.++|++++||+|++
T Consensus 16 ~~~f~~~l~~ll~~l~~~a~~~~~~~f~~~~~~~-~~~~vYgl~qC~~Dls~~dC~~Cl~~a~~~~~~~C~~~~g~~v~~ 94 (106)
T PF01657_consen 16 NSTFEQNLNSLLSSLVSNAASSSSKGFATGSAGS-GPDTVYGLAQCRGDLSPSDCRACLADAVANISSCCPGSRGGRVWY 94 (106)
T ss_dssp T-THHHHHHHHHHHHHHHGGGTT-TEEEEEE--S-T---EEEEEEE-TTS-HHHHHHHHHHHHCCHHHHTTSBSSEEEEE
T ss_pred CchHHHHHHHHHHHHHHHHhhccccCcEEeecCC-CCCeEEEEEEcCCCCChhhhHHHHHHHHHHHHHhCCCCceEEEEC
Confidence 5669999999999999998763 47999998744 678999999999999999999999999999999999999999999
Q ss_pred CceEEEEecccc
Q 045568 235 PSCITRYELYPF 246 (379)
Q Consensus 235 ~~C~lRY~~~~F 246 (379)
++|+||||+|+|
T Consensus 95 ~~C~lRY~~~~F 106 (106)
T PF01657_consen 95 DSCFLRYENYPF 106 (106)
T ss_dssp SSEEEEEESS--
T ss_pred CCEEEEEECCCC
Confidence 999999999998
No 3
>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=98.07 E-value=1.7e-06 Score=85.59 Aligned_cols=61 Identities=30% Similarity=0.421 Sum_probs=53.7
Q ss_pred EEEEEeeccCCCccccccCcccc-ccCcH-HHHHHHHHHHHhhcCCCCCCCCCHHHHHHHhccC
Q 045568 273 EIKTWKLWCKGEEALELMDPVIK-QSCVA-AELLKFIHIGLLCVQEDPADRPNMSSVAVMLASD 334 (379)
Q Consensus 273 ~iwv~~~~~~~~~~~~ivD~~L~-~~~~~-~~l~~~~~ial~Cv~~~p~~RPtM~~Vv~~L~~~ 334 (379)
..|+++.+.++ .+.+++||+|. +.+.. +++.+++++|++|++++|.+||+|.+|+++|+.+
T Consensus 290 ~~w~~~~~~~~-~~~eiiD~~l~~~~~~~~~~~~~~~~~a~~C~~~~~~~RP~m~~Vv~~L~~~ 352 (361)
T KOG1187|consen 290 VEWAKPLLEEG-KLREIVDPRLKEGEYPDEKEVKKLAELALRCLRPDPKERPTMSQVVKELEGI 352 (361)
T ss_pred HHHHHHHHHCc-chhheeCCCccCCCCChHHHHHHHHHHHHHHcCcCCCcCcCHHHHHHHHHhh
Confidence 34888899998 89999999996 55554 7899999999999999999999999999999654
No 4
>PF11883 DUF3403: Domain of unknown function (DUF3403); InterPro: IPR021820 This functionally uncharacterised domain of around 50 amino acids is found in the C terminus of eukaryotic S-locus receptor kinase proteins. ; GO: 0004674 protein serine/threonine kinase activity
Probab=95.61 E-value=0.018 Score=39.65 Aligned_cols=44 Identities=50% Similarity=0.742 Sum_probs=33.4
Q ss_pred CCCCCCCCCCceeeccccCCCCCCCCCCC--CcccccceeeccccCC
Q 045568 335 AVPLPQPTQPAFSAGRSIARSGQSSSSDS--KICSVNEVTLSDVSPR 379 (379)
Q Consensus 335 ~~~~~~~~~p~~~~~~~~~~~~~s~~~~~--~~~s~~~~s~s~~~~r 379 (379)
...++.|.+|+|+.++... ...+++... ..+++|++|++.+++|
T Consensus 3 ~~~LP~PKqPgF~~~r~~~-e~~sSss~~~~~~~SvNevTiT~l~~R 48 (48)
T PF11883_consen 3 TATLPQPKQPGFFTGRSPS-ETDSSSSKQRDESCSVNEVTITMLEAR 48 (48)
T ss_pred cccCCCCCCCCEEeEcCCC-CcCCCcccccCCCCCeeeEEEEeEecC
Confidence 3578999999999887765 333333333 5789999999999998
No 5
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=94.46 E-value=0.021 Score=63.65 Aligned_cols=50 Identities=26% Similarity=0.462 Sum_probs=40.9
Q ss_pred ccccccCcccccc--CcHHHHHHHHHHHHhhcCCCCCCCCCHHHHHHHhccC
Q 045568 285 EALELMDPVIKQS--CVAAELLKFIHIGLLCVQEDPADRPNMSSVAVMLASD 334 (379)
Q Consensus 285 ~~~~ivD~~L~~~--~~~~~l~~~~~ial~Cv~~~p~~RPtM~~Vv~~L~~~ 334 (379)
...+++|+.+... ...+++.++.+++.+|.+.+|++||+|.+|+++|+..
T Consensus 900 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~evl~~L~~~ 951 (968)
T PLN00113 900 HLDMWIDPSIRGDVSVNQNEIVEVMNLALHCTATDPTARPCANDVLKTLESA 951 (968)
T ss_pred chhheeCccccCCCCccHHHHHHHHHHHHhhCcCCchhCcCHHHHHHHHHHh
Confidence 4556778877432 3456788899999999999999999999999999865
No 6
>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut
Probab=88.61 E-value=0.42 Score=44.36 Aligned_cols=31 Identities=19% Similarity=0.459 Sum_probs=27.4
Q ss_pred HHHHHHHHhhcCCCCCCCCCHHHHHHHhccC
Q 045568 304 LKFIHIGLLCVQEDPADRPNMSSVAVMLASD 334 (379)
Q Consensus 304 ~~~~~ial~Cv~~~p~~RPtM~~Vv~~L~~~ 334 (379)
..+..+..+|++.+|.+||+|.+|+++|+.+
T Consensus 253 ~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~i 283 (284)
T cd05038 253 DEVYDLMKLCWEAEPQDRPSFADLILIVDRL 283 (284)
T ss_pred HHHHHHHHHHhccChhhCCCHHHHHHHHhhc
Confidence 3567788899999999999999999999864
No 7
>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th
Probab=84.99 E-value=0.9 Score=42.33 Aligned_cols=30 Identities=27% Similarity=0.472 Sum_probs=26.6
Q ss_pred HHHHHHHhhcCCCCCCCCCHHHHHHHhccC
Q 045568 305 KFIHIGLLCVQEDPADRPNMSSVAVMLASD 334 (379)
Q Consensus 305 ~~~~ial~Cv~~~p~~RPtM~~Vv~~L~~~ 334 (379)
.+.++...|++.+|.+||+|.+|+++|+.+
T Consensus 254 ~~~~li~~cl~~~p~~Rpt~~ei~~~l~~~ 283 (284)
T cd05081 254 EIYAIMKECWNNDPSQRPSFSELALQVEAI 283 (284)
T ss_pred HHHHHHHHHccCChhhCCCHHHHHHHHHhc
Confidence 466788899999999999999999999764
No 8
>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke
Probab=84.28 E-value=0.98 Score=42.31 Aligned_cols=29 Identities=24% Similarity=0.497 Sum_probs=26.0
Q ss_pred HHHHHHHHhhcCCCCCCCCCHHHHHHHhc
Q 045568 304 LKFIHIGLLCVQEDPADRPNMSSVAVMLA 332 (379)
Q Consensus 304 ~~~~~ial~Cv~~~p~~RPtM~~Vv~~L~ 332 (379)
..+.++...|++.+|.+||+|.++++.|+
T Consensus 267 ~~l~~li~~cl~~~p~~Rpt~~el~~~L~ 295 (296)
T cd05051 267 KDIYELMLECWRRDEEDRPTFREIHLFLQ 295 (296)
T ss_pred HHHHHHHHHHhccChhcCCCHHHHHHHhc
Confidence 35778889999999999999999999885
No 9
>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a
Probab=84.10 E-value=1 Score=41.45 Aligned_cols=30 Identities=33% Similarity=0.558 Sum_probs=26.4
Q ss_pred HHHHHHHHhhcCCCCCCCCCHHHHHHHhcc
Q 045568 304 LKFIHIGLLCVQEDPADRPNMSSVAVMLAS 333 (379)
Q Consensus 304 ~~~~~ial~Cv~~~p~~RPtM~~Vv~~L~~ 333 (379)
..+..+..+|++.+|.+||+|.+++..|+.
T Consensus 231 ~~~~~li~~~l~~~P~~Rp~~~~l~~~l~~ 260 (261)
T cd05068 231 KELYDIMLDCWKEDPDDRPTFETLQWKLED 260 (261)
T ss_pred HHHHHHHHHHhhcCcccCCCHHHHHHHHhc
Confidence 456778889999999999999999999874
No 10
>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including
Probab=83.76 E-value=1 Score=42.44 Aligned_cols=28 Identities=21% Similarity=0.449 Sum_probs=25.7
Q ss_pred HHHHHHHhhcCCCCCCCCCHHHHHHHhc
Q 045568 305 KFIHIGLLCVQEDPADRPNMSSVAVMLA 332 (379)
Q Consensus 305 ~~~~ial~Cv~~~p~~RPtM~~Vv~~L~ 332 (379)
.+.++...|.+.+|.+||+|.+|++.|+
T Consensus 267 ~l~~li~~~l~~~p~~RPs~~~i~~~l~ 294 (295)
T cd05097 267 PVFKLMMRCWSRDIKDRPTFNKIHHFLR 294 (295)
T ss_pred HHHHHHHHHcCCCchhCcCHHHHHHHHh
Confidence 5778889999999999999999999985
No 11
>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk. Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom
Probab=83.25 E-value=1.2 Score=40.70 Aligned_cols=29 Identities=28% Similarity=0.523 Sum_probs=25.8
Q ss_pred HHHHHHHhhcCCCCCCCCCHHHHHHHhcc
Q 045568 305 KFIHIGLLCVQEDPADRPNMSSVAVMLAS 333 (379)
Q Consensus 305 ~~~~ial~Cv~~~p~~RPtM~~Vv~~L~~ 333 (379)
.+.++..+|.+.+|.+||++.++.+.|+.
T Consensus 232 ~~~~~i~~~l~~~p~~Rpt~~~l~~~L~~ 260 (261)
T cd05148 232 EIYKIMLECWAAEPEDRPSFKALREELDN 260 (261)
T ss_pred HHHHHHHHHcCCCchhCcCHHHHHHHHhc
Confidence 45677789999999999999999999975
No 12
>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase. Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ
Probab=82.88 E-value=1.2 Score=40.67 Aligned_cols=29 Identities=31% Similarity=0.449 Sum_probs=25.4
Q ss_pred HHHHHHHHhhcCCCCCCCCCHHHHHHHhc
Q 045568 304 LKFIHIGLLCVQEDPADRPNMSSVAVMLA 332 (379)
Q Consensus 304 ~~~~~ial~Cv~~~p~~RPtM~~Vv~~L~ 332 (379)
..+..+...|++.+|.+||+|.+|+++|.
T Consensus 228 ~~~~~l~~~~l~~~p~~Rp~~~~~l~~l~ 256 (256)
T cd05112 228 QSVYELMQHCWKERPEDRPSFSLLLHQLA 256 (256)
T ss_pred HHHHHHHHHHcccChhhCCCHHHHHHhhC
Confidence 34677889999999999999999999873
No 13
>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored
Probab=82.72 E-value=1.3 Score=40.88 Aligned_cols=30 Identities=27% Similarity=0.449 Sum_probs=26.6
Q ss_pred HHHHHHHHhhcCCCCCCCCCHHHHHHHhcc
Q 045568 304 LKFIHIGLLCVQEDPADRPNMSSVAVMLAS 333 (379)
Q Consensus 304 ~~~~~ial~Cv~~~p~~RPtM~~Vv~~L~~ 333 (379)
..+.++...|.+.+|.+||+|.+|++.|+.
T Consensus 237 ~~~~~li~~c~~~~p~~Rp~~~~i~~~l~~ 266 (268)
T cd05063 237 SAVYQLMLQCWQQDRARRPRFVDIVNLLDK 266 (268)
T ss_pred HHHHHHHHHHcCCCcccCcCHHHHHHHHHh
Confidence 356788899999999999999999999875
No 14
>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein. Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi
Probab=81.70 E-value=1.4 Score=41.36 Aligned_cols=30 Identities=20% Similarity=0.506 Sum_probs=26.5
Q ss_pred HHHHHHHhhcCCCCCCCCCHHHHHHHhccC
Q 045568 305 KFIHIGLLCVQEDPADRPNMSSVAVMLASD 334 (379)
Q Consensus 305 ~~~~ial~Cv~~~p~~RPtM~~Vv~~L~~~ 334 (379)
.+.++...|++.+|.+||+|.+++++|+..
T Consensus 257 ~~~~~i~~cl~~~P~~Rp~~~~i~~~l~~~ 286 (290)
T cd05045 257 EMYNLMLTCWKQEPDKRPTFADISKELEKM 286 (290)
T ss_pred HHHHHHHHHccCCcccCCCHHHHHHHHHHH
Confidence 466778899999999999999999999764
No 15
>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n
Probab=81.63 E-value=1.1 Score=42.16 Aligned_cols=30 Identities=27% Similarity=0.391 Sum_probs=27.1
Q ss_pred HHHHHHHhhcCCCCCCCCCHHHHHHHhccC
Q 045568 305 KFIHIGLLCVQEDPADRPNMSSVAVMLASD 334 (379)
Q Consensus 305 ~~~~ial~Cv~~~p~~RPtM~~Vv~~L~~~ 334 (379)
.+..+...|++.+|.+||+|.+|+++|+..
T Consensus 253 ~~~~li~~~l~~~P~~Rpt~~~v~~~l~~~ 282 (291)
T cd05094 253 EVYDIMLGCWQREPQQRLNIKEIYKILHAL 282 (291)
T ss_pred HHHHHHHHHcccChhhCcCHHHHHHHHHHH
Confidence 466788899999999999999999999875
No 16
>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.
Probab=81.54 E-value=1.7 Score=40.10 Aligned_cols=28 Identities=21% Similarity=0.493 Sum_probs=23.8
Q ss_pred HHHHHHHhhcCCCCCCCCCHHHHHHHhc
Q 045568 305 KFIHIGLLCVQEDPADRPNMSSVAVMLA 332 (379)
Q Consensus 305 ~~~~ial~Cv~~~p~~RPtM~~Vv~~L~ 332 (379)
.+..+..+|++.+|.+||+|.+|..+|+
T Consensus 241 ~l~~li~~cl~~~p~~Rp~~~e~~~~~~ 268 (269)
T cd08528 241 DVTDVITSCLTPDAEARPDIIQVSAMIS 268 (269)
T ss_pred HHHHHHHHHCCCCCccCCCHHHHHHHhc
Confidence 3455666899999999999999999985
No 17
>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,
Probab=81.44 E-value=1.3 Score=41.35 Aligned_cols=31 Identities=23% Similarity=0.352 Sum_probs=27.2
Q ss_pred HHHHHHHHhhcCCCCCCCCCHHHHHHHhccC
Q 045568 304 LKFIHIGLLCVQEDPADRPNMSSVAVMLASD 334 (379)
Q Consensus 304 ~~~~~ial~Cv~~~p~~RPtM~~Vv~~L~~~ 334 (379)
..+..+...|++.+|.+||+|.++++.|+.+
T Consensus 261 ~~~~~li~~~l~~~p~~Rps~~eil~~l~~~ 291 (293)
T cd05053 261 QELYHLMRDCWHEVPSQRPTFKQLVEDLDRM 291 (293)
T ss_pred HHHHHHHHHHcccCcccCcCHHHHHHHHHHh
Confidence 3567888999999999999999999998754
No 18
>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit
Probab=81.44 E-value=1.6 Score=41.00 Aligned_cols=29 Identities=17% Similarity=0.399 Sum_probs=25.5
Q ss_pred HHHHHHHHhhcCCCCCCCCCHHHHHHHhc
Q 045568 304 LKFIHIGLLCVQEDPADRPNMSSVAVMLA 332 (379)
Q Consensus 304 ~~~~~ial~Cv~~~p~~RPtM~~Vv~~L~ 332 (379)
..+.++..+|.+.+|.+||+|.+|++.|+
T Consensus 267 ~~~~~li~~cl~~~p~~Rp~~~~i~~~l~ 295 (296)
T cd05095 267 DSLYKLMLSCWRRNAKERPSFQEIHATLL 295 (296)
T ss_pred HHHHHHHHHHcCCCcccCCCHHHHHHHHh
Confidence 35667888999999999999999999885
No 19
>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h
Probab=81.37 E-value=1.5 Score=40.12 Aligned_cols=27 Identities=19% Similarity=0.442 Sum_probs=24.5
Q ss_pred HHHHHHHhhcCCCCCCCCCHHHHHHHh
Q 045568 305 KFIHIGLLCVQEDPADRPNMSSVAVML 331 (379)
Q Consensus 305 ~~~~ial~Cv~~~p~~RPtM~~Vv~~L 331 (379)
.+..+...|.+.+|.+||+|.++++.|
T Consensus 229 ~~~~li~~c~~~~p~~Rps~~~l~~~l 255 (256)
T cd05114 229 TVYEVMYSCWHEKPEGRPTFAELLRAI 255 (256)
T ss_pred HHHHHHHHHccCCcccCcCHHHHHHhh
Confidence 467888899999999999999999887
No 20
>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase. Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays
Probab=81.29 E-value=1.6 Score=40.23 Aligned_cols=29 Identities=24% Similarity=0.478 Sum_probs=25.2
Q ss_pred HHHHHHHhhcCCCCCCCCCHHHHHHHhcc
Q 045568 305 KFIHIGLLCVQEDPADRPNMSSVAVMLAS 333 (379)
Q Consensus 305 ~~~~ial~Cv~~~p~~RPtM~~Vv~~L~~ 333 (379)
.+.++...|++.+|.+||+|.++.++|+.
T Consensus 233 ~~~~li~~cl~~~p~~Rp~~~~l~~~l~~ 261 (263)
T cd05052 233 KVYELMRACWQWNPSDRPSFAEIHQAFET 261 (263)
T ss_pred HHHHHHHHHccCCcccCCCHHHHHHHHHh
Confidence 35567789999999999999999999875
No 21
>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer
Probab=81.28 E-value=1.4 Score=40.93 Aligned_cols=30 Identities=27% Similarity=0.440 Sum_probs=26.1
Q ss_pred HHHHHHHHhhcCCCCCCCCCHHHHHHHhcc
Q 045568 304 LKFIHIGLLCVQEDPADRPNMSSVAVMLAS 333 (379)
Q Consensus 304 ~~~~~ial~Cv~~~p~~RPtM~~Vv~~L~~ 333 (379)
..+.++...|.+.+|.+||++.+|++.|+.
T Consensus 253 ~~~~~l~~~c~~~~p~~Rp~~~~i~~~l~~ 282 (283)
T cd05048 253 ARVYALMIECWNEIPARRPRFKDIHTRLRS 282 (283)
T ss_pred HHHHHHHHHHccCChhhCcCHHHHHHHHhc
Confidence 356677789999999999999999999864
No 22
>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign
Probab=81.19 E-value=1.2 Score=41.45 Aligned_cols=31 Identities=16% Similarity=0.201 Sum_probs=27.0
Q ss_pred HHHHHHHHhhcCCCCCCCCCHHHHHHHhccC
Q 045568 304 LKFIHIGLLCVQEDPADRPNMSSVAVMLASD 334 (379)
Q Consensus 304 ~~~~~ial~Cv~~~p~~RPtM~~Vv~~L~~~ 334 (379)
..+..+...|.+.+|.+||+|.+|+.+|+..
T Consensus 251 ~~~~~li~~cl~~~p~~Rps~~~i~~~l~~~ 281 (283)
T cd05080 251 QEVYILMKNCWETEAKFRPTFRSLIPILKEM 281 (283)
T ss_pred HHHHHHHHHHhccChhhCCCHHHHHHHHHHh
Confidence 3567788899999999999999999999764
No 23
>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase. Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M
Probab=81.06 E-value=1.7 Score=40.61 Aligned_cols=29 Identities=31% Similarity=0.618 Sum_probs=25.7
Q ss_pred HHHHHHHHhhcCCCCCCCCCHHHHHHHhc
Q 045568 304 LKFIHIGLLCVQEDPADRPNMSSVAVMLA 332 (379)
Q Consensus 304 ~~~~~ial~Cv~~~p~~RPtM~~Vv~~L~ 332 (379)
..+..+..+|++.+|.+||++.++++.|+
T Consensus 259 ~~l~~li~~~l~~~p~~Rpt~~el~~~l~ 287 (288)
T cd05050 259 LELYNLMRLCWSKLPSDRPSFASINRILQ 287 (288)
T ss_pred HHHHHHHHHHcccCcccCCCHHHHHHHhh
Confidence 35677889999999999999999999986
No 24
>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn. Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa
Probab=80.86 E-value=1.7 Score=39.89 Aligned_cols=29 Identities=21% Similarity=0.425 Sum_probs=25.6
Q ss_pred HHHHHHHhhcCCCCCCCCCHHHHHHHhcc
Q 045568 305 KFIHIGLLCVQEDPADRPNMSSVAVMLAS 333 (379)
Q Consensus 305 ~~~~ial~Cv~~~p~~RPtM~~Vv~~L~~ 333 (379)
.+.++...|++.+|++||+|.++.++|+.
T Consensus 232 ~~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 260 (261)
T cd05072 232 ELYDIMKTCWKEKAEERPTFDYLQSVLDD 260 (261)
T ss_pred HHHHHHHHHccCCcccCcCHHHHHHHHhc
Confidence 46677889999999999999999999874
No 25
>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment
Probab=80.53 E-value=1.6 Score=40.11 Aligned_cols=29 Identities=28% Similarity=0.491 Sum_probs=25.9
Q ss_pred HHHHHHHhhcCCCCCCCCCHHHHHHHhcc
Q 045568 305 KFIHIGLLCVQEDPADRPNMSSVAVMLAS 333 (379)
Q Consensus 305 ~~~~ial~Cv~~~p~~RPtM~~Vv~~L~~ 333 (379)
.+.++...|++.+|.+||+|.+|++.|+.
T Consensus 236 ~l~~li~~cl~~~p~~Rp~~~ei~~~l~~ 264 (266)
T cd05033 236 ALYQLMLDCWQKDRNERPTFSQIVSTLDK 264 (266)
T ss_pred HHHHHHHHHcCCCcccCcCHHHHHHHHHh
Confidence 46678889999999999999999999875
No 26
>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k
Probab=79.89 E-value=1.8 Score=40.95 Aligned_cols=28 Identities=25% Similarity=0.496 Sum_probs=25.0
Q ss_pred HHHHHHHhhcCCCCCCCCCHHHHHHHhc
Q 045568 305 KFIHIGLLCVQEDPADRPNMSSVAVMLA 332 (379)
Q Consensus 305 ~~~~ial~Cv~~~p~~RPtM~~Vv~~L~ 332 (379)
.+.++...|.+.+|.+||+|.+|++.|+
T Consensus 276 ~~~~li~~cl~~~p~~RPs~~~i~~~l~ 303 (304)
T cd05096 276 GLYELMLQCWSRDCRERPSFSDIHAFLT 303 (304)
T ss_pred HHHHHHHHHccCCchhCcCHHHHHHHHh
Confidence 4567788999999999999999999886
No 27
>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows
Probab=79.86 E-value=1.7 Score=39.88 Aligned_cols=27 Identities=30% Similarity=0.514 Sum_probs=24.6
Q ss_pred HHHHHHHhhcCCCCCCCCCHHHHHHHh
Q 045568 305 KFIHIGLLCVQEDPADRPNMSSVAVML 331 (379)
Q Consensus 305 ~~~~ial~Cv~~~p~~RPtM~~Vv~~L 331 (379)
.+..+...|++.+|++||+|.+|+++|
T Consensus 229 ~~~~li~~cl~~~p~~Rpt~~~~l~~l 255 (256)
T cd05059 229 EVYTIMYSCWHEKPEDRPAFKKLLSQL 255 (256)
T ss_pred HHHHHHHHHhcCChhhCcCHHHHHHHh
Confidence 567788999999999999999999987
No 28
>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity. Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....
Probab=79.61 E-value=1.4 Score=40.70 Aligned_cols=27 Identities=22% Similarity=0.441 Sum_probs=20.7
Q ss_pred HHHHHHHhhcCCCCCCCCCHHHHHHHh
Q 045568 305 KFIHIGLLCVQEDPADRPNMSSVAVML 331 (379)
Q Consensus 305 ~~~~ial~Cv~~~p~~RPtM~~Vv~~L 331 (379)
.+..+...|...+|.+||+|.++++.|
T Consensus 233 ~~~~li~~C~~~~p~~RPs~~~i~~~L 259 (259)
T PF07714_consen 233 DIYSLIQQCWSHDPEKRPSFQEILQEL 259 (259)
T ss_dssp HHHHHHHHHT-SSGGGS--HHHHHHHH
T ss_pred HHHHHHHHHcCCChhhCcCHHHHHhcC
Confidence 355777899999999999999999876
No 29
>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V
Probab=79.33 E-value=1.6 Score=41.98 Aligned_cols=30 Identities=33% Similarity=0.578 Sum_probs=26.5
Q ss_pred HHHHHHHhhcCCCCCCCCCHHHHHHHhccC
Q 045568 305 KFIHIGLLCVQEDPADRPNMSSVAVMLASD 334 (379)
Q Consensus 305 ~~~~ial~Cv~~~p~~RPtM~~Vv~~L~~~ 334 (379)
.+..+...|.+.+|.+||+|.+++++|+..
T Consensus 305 ~l~~li~~cl~~dp~~RPs~~el~~~l~~~ 334 (338)
T cd05102 305 EIYRIMLACWQGDPKERPTFSALVEILGDL 334 (338)
T ss_pred HHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence 466788899999999999999999999764
No 30
>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes. Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular
Probab=78.85 E-value=1.9 Score=39.20 Aligned_cols=28 Identities=29% Similarity=0.440 Sum_probs=25.0
Q ss_pred HHHHHHHhhcCCCCCCCCCHHHHHHHhc
Q 045568 305 KFIHIGLLCVQEDPADRPNMSSVAVMLA 332 (379)
Q Consensus 305 ~~~~ial~Cv~~~p~~RPtM~~Vv~~L~ 332 (379)
.+..+...|.+.+|.+||++.+|.++|+
T Consensus 224 ~~~~li~~~l~~~p~~Rps~~~~~~~l~ 251 (252)
T cd05084 224 AVYRLMERCWEYDPGQRPSFSTVHQELQ 251 (252)
T ss_pred HHHHHHHHHcCCChhhCcCHHHHHHHHh
Confidence 4667788999999999999999999985
No 31
>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer. Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c
Probab=78.81 E-value=2.2 Score=38.69 Aligned_cols=29 Identities=24% Similarity=0.359 Sum_probs=25.7
Q ss_pred HHHHHHHHhhcCCCCCCCCCHHHHHHHhc
Q 045568 304 LKFIHIGLLCVQEDPADRPNMSSVAVMLA 332 (379)
Q Consensus 304 ~~~~~ial~Cv~~~p~~RPtM~~Vv~~L~ 332 (379)
..+..+...|++.+|++||+|.+++++|.
T Consensus 221 ~~~~~li~~~l~~~p~~Rp~~~~l~~~l~ 249 (250)
T cd05085 221 DDVYKVMQRCWDYKPENRPKFSELQKELA 249 (250)
T ss_pred HHHHHHHHHHcccCcccCCCHHHHHHHhc
Confidence 45677888999999999999999999885
No 32
>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi
Probab=78.70 E-value=2.1 Score=39.20 Aligned_cols=30 Identities=30% Similarity=0.515 Sum_probs=26.6
Q ss_pred HHHHHHHhhcCCCCCCCCCHHHHHHHhccC
Q 045568 305 KFIHIGLLCVQEDPADRPNMSSVAVMLASD 334 (379)
Q Consensus 305 ~~~~ial~Cv~~~p~~RPtM~~Vv~~L~~~ 334 (379)
.+..+...|++.+|.+||++.++++.|+.+
T Consensus 226 ~l~~li~~cl~~~p~~Rp~~~~l~~~l~~~ 255 (257)
T cd05060 226 EIYSIMLSCWKYRPEDRPTFSELESTFRRD 255 (257)
T ss_pred HHHHHHHHHhcCChhhCcCHHHHHHHHHhc
Confidence 456788899999999999999999999865
No 33
>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh
Probab=78.65 E-value=1.9 Score=40.06 Aligned_cols=28 Identities=18% Similarity=0.387 Sum_probs=25.0
Q ss_pred HHHHHHHhhcCCCCCCCCCHHHHHHHhc
Q 045568 305 KFIHIGLLCVQEDPADRPNMSSVAVMLA 332 (379)
Q Consensus 305 ~~~~ial~Cv~~~p~~RPtM~~Vv~~L~ 332 (379)
.+..+...|.+.+|.+||++.+++.+|+
T Consensus 249 ~~~~li~~~l~~~p~~Rps~~e~l~~l~ 276 (277)
T cd05062 249 MLFELMRMCWQYNPKMRPSFLEIISSIK 276 (277)
T ss_pred HHHHHHHHHcCCChhhCcCHHHHHHHhh
Confidence 4567888999999999999999999886
No 34
>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit. Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce
Probab=78.38 E-value=1.7 Score=42.96 Aligned_cols=29 Identities=21% Similarity=0.488 Sum_probs=25.4
Q ss_pred HHHHHHHhhcCCCCCCCCCHHHHHHHhcc
Q 045568 305 KFIHIGLLCVQEDPADRPNMSSVAVMLAS 333 (379)
Q Consensus 305 ~~~~ial~Cv~~~p~~RPtM~~Vv~~L~~ 333 (379)
.+..+...|.+.+|.+||+|.+|+++|+.
T Consensus 345 ~l~~li~~cl~~dP~~RPs~~eil~~l~~ 373 (375)
T cd05104 345 EMYDIMKSCWDADPLKRPTFKQIVQLIEQ 373 (375)
T ss_pred HHHHHHHHHccCChhHCcCHHHHHHHHHh
Confidence 35567788999999999999999999974
No 35
>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase. Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio
Probab=78.07 E-value=2.1 Score=39.20 Aligned_cols=28 Identities=21% Similarity=0.377 Sum_probs=24.4
Q ss_pred HHHHHHhhcCCCCCCCCCHHHHHHHhcc
Q 045568 306 FIHIGLLCVQEDPADRPNMSSVAVMLAS 333 (379)
Q Consensus 306 ~~~ial~Cv~~~p~~RPtM~~Vv~~L~~ 333 (379)
+..+-..|.+.+|.+||+|.+|+++|+.
T Consensus 227 l~~li~~~~~~~p~~Rp~~~~i~~~l~~ 254 (257)
T cd05116 227 MYDLMKLCWTYGVDERPGFAVVELRLRN 254 (257)
T ss_pred HHHHHHHHhccCchhCcCHHHHHHHHhc
Confidence 4466778999999999999999999974
No 36
>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity
Probab=77.43 E-value=2 Score=39.41 Aligned_cols=28 Identities=18% Similarity=0.368 Sum_probs=24.2
Q ss_pred HHHHHHHhhcCCCCCCCCCHHHHHHHhc
Q 045568 305 KFIHIGLLCVQEDPADRPNMSSVAVMLA 332 (379)
Q Consensus 305 ~~~~ial~Cv~~~p~~RPtM~~Vv~~L~ 332 (379)
.+..+...|.+.+|.+||++.++++.|+
T Consensus 231 ~~~~li~~~l~~~p~~Rps~~~il~~l~ 258 (258)
T cd05078 231 ELANLINQCMDYEPDFRPSFRAIIRDLN 258 (258)
T ss_pred HHHHHHHHHhccChhhCCCHHHHHHhcC
Confidence 4566777899999999999999999874
No 37
>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu
Probab=77.36 E-value=2.2 Score=39.13 Aligned_cols=30 Identities=23% Similarity=0.500 Sum_probs=25.9
Q ss_pred HHHHHHHHhhcCCCCCCCCCHHHHHHHhcc
Q 045568 304 LKFIHIGLLCVQEDPADRPNMSSVAVMLAS 333 (379)
Q Consensus 304 ~~~~~ial~Cv~~~p~~RPtM~~Vv~~L~~ 333 (379)
..+..+...|.+.+|.+||++.+|++.|+.
T Consensus 242 ~~~~~li~~~l~~~p~~Rp~~~e~~~~l~~ 271 (273)
T cd05035 242 DELYDLMYSCWRADPKDRPTFTKLREVLEN 271 (273)
T ss_pred HHHHHHHHHHcCCChhhCcCHHHHHHHHHh
Confidence 356677788999999999999999999874
No 38
>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron. Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca
Probab=77.36 E-value=2.1 Score=39.17 Aligned_cols=30 Identities=20% Similarity=0.362 Sum_probs=26.4
Q ss_pred HHHHHHHhhcCCCCCCCCCHHHHHHHhccC
Q 045568 305 KFIHIGLLCVQEDPADRPNMSSVAVMLASD 334 (379)
Q Consensus 305 ~~~~ial~Cv~~~p~~RPtM~~Vv~~L~~~ 334 (379)
.+..+...|.+.+|.+||++.+|+.+|+..
T Consensus 230 ~~~~li~~cl~~~p~~Rp~~~~il~~l~~~ 259 (262)
T cd05058 230 PLYEVMLSCWHPKPEMRPTFSELVSRIEQI 259 (262)
T ss_pred HHHHHHHHHcCCChhhCCCHHHHHHHHHHH
Confidence 466788899999999999999999998753
No 39
>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto
Probab=77.09 E-value=2.1 Score=41.45 Aligned_cols=31 Identities=29% Similarity=0.488 Sum_probs=27.2
Q ss_pred HHHHHHHHhhcCCCCCCCCCHHHHHHHhccC
Q 045568 304 LKFIHIGLLCVQEDPADRPNMSSVAVMLASD 334 (379)
Q Consensus 304 ~~~~~ial~Cv~~~p~~RPtM~~Vv~~L~~~ 334 (379)
..+..+.+.|++.+|++||++.+|+++|+..
T Consensus 303 ~~~~~l~~~cl~~~p~~RPs~~ell~~l~~~ 333 (337)
T cd05054 303 PEIYSIMLDCWHNNPEDRPTFSELVEILGDL 333 (337)
T ss_pred HHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence 3567888999999999999999999999753
No 40
>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl. Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor
Probab=76.75 E-value=2.6 Score=38.81 Aligned_cols=29 Identities=21% Similarity=0.386 Sum_probs=25.6
Q ss_pred HHHHHHHhhcCCCCCCCCCHHHHHHHhcc
Q 045568 305 KFIHIGLLCVQEDPADRPNMSSVAVMLAS 333 (379)
Q Consensus 305 ~~~~ial~Cv~~~p~~RPtM~~Vv~~L~~ 333 (379)
.+..+...|.+.+|++||+|.++++.|+.
T Consensus 242 ~~~~li~~~l~~~p~~Rps~~~l~~~l~~ 270 (272)
T cd05075 242 GLYSLMSSCWLLNPKDRPSFETLRCELEK 270 (272)
T ss_pred HHHHHHHHHcCCCcccCcCHHHHHHHHHh
Confidence 45677889999999999999999999875
No 41
>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk
Probab=76.70 E-value=2.6 Score=38.47 Aligned_cols=29 Identities=28% Similarity=0.403 Sum_probs=25.2
Q ss_pred HHHHHHHhhcCCCCCCCCCHHHHHHHhcc
Q 045568 305 KFIHIGLLCVQEDPADRPNMSSVAVMLAS 333 (379)
Q Consensus 305 ~~~~ial~Cv~~~p~~RPtM~~Vv~~L~~ 333 (379)
.+..+...|++.+|.+||++.+++++|+.
T Consensus 227 ~~~~li~~~l~~~p~~Rp~~~~l~~~l~~ 255 (256)
T cd05039 227 EVYKVMKDCWELDPAKRPTFKQLREQLAL 255 (256)
T ss_pred HHHHHHHHHhccChhhCcCHHHHHHHHhc
Confidence 45667778999999999999999999964
No 42
>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome. Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds
Probab=76.32 E-value=2.7 Score=38.55 Aligned_cols=29 Identities=21% Similarity=0.351 Sum_probs=24.9
Q ss_pred HHHHHHHHhhcCCCCCCCCCHHHHHHHhc
Q 045568 304 LKFIHIGLLCVQEDPADRPNMSSVAVMLA 332 (379)
Q Consensus 304 ~~~~~ial~Cv~~~p~~RPtM~~Vv~~L~ 332 (379)
..+.++...|.+.+|.+||++.+++..|+
T Consensus 228 ~~~~~li~~cl~~~p~~Rp~~~~ll~~~~ 256 (256)
T cd05113 228 EKVYAIMYSCWHEKAEERPTFQQLLSSIE 256 (256)
T ss_pred HHHHHHHHHHcCCCcccCCCHHHHHHhhC
Confidence 35677788999999999999999998774
No 43
>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a
Probab=76.29 E-value=2.5 Score=39.41 Aligned_cols=31 Identities=10% Similarity=0.149 Sum_probs=26.9
Q ss_pred HHHHHHHHhhcCCCCCCCCCHHHHHHHhccC
Q 045568 304 LKFIHIGLLCVQEDPADRPNMSSVAVMLASD 334 (379)
Q Consensus 304 ~~~~~ial~Cv~~~p~~RPtM~~Vv~~L~~~ 334 (379)
..+..+...|++.+|.+||++.++++.|+.+
T Consensus 253 ~~~~~li~~~l~~~p~~Rpt~~~il~~l~~~ 283 (284)
T cd05079 253 EEVYQLMRKCWEFQPSKRTTFQNLIEGFEAI 283 (284)
T ss_pred HHHHHHHHHHccCCcccCcCHHHHHHHHHhh
Confidence 3567788899999999999999999998753
No 44
>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=76.23 E-value=2.8 Score=38.98 Aligned_cols=27 Identities=26% Similarity=0.427 Sum_probs=24.3
Q ss_pred HHHHHHhhcCCCCCCCCCHHHHHHHhc
Q 045568 306 FIHIGLLCVQEDPADRPNMSSVAVMLA 332 (379)
Q Consensus 306 ~~~ial~Cv~~~p~~RPtM~~Vv~~L~ 332 (379)
+..+...|++.+|.+||+|.+|+..|+
T Consensus 255 ~~~li~~cl~~~p~~RP~~~~i~~~l~ 281 (283)
T cd05091 255 VYTLMLECWNEFPSRRPRFKDIHSRLR 281 (283)
T ss_pred HHHHHHHHhCCCcccCCCHHHHHHHhh
Confidence 567778999999999999999999886
No 45
>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l
Probab=75.69 E-value=2.4 Score=39.26 Aligned_cols=30 Identities=23% Similarity=0.441 Sum_probs=26.5
Q ss_pred HHHHHHHhhcCCCCCCCCCHHHHHHHhccC
Q 045568 305 KFIHIGLLCVQEDPADRPNMSSVAVMLASD 334 (379)
Q Consensus 305 ~~~~ial~Cv~~~p~~RPtM~~Vv~~L~~~ 334 (379)
.+..+...|.+.+|.+||++.+++.+|+.+
T Consensus 239 ~~~~li~~~l~~~p~~Rps~~~il~~l~~~ 268 (270)
T cd05047 239 EVYDLMRQCWREKPYERPSFAQILVSLNRM 268 (270)
T ss_pred HHHHHHHHHcccChhhCCCHHHHHHHHHHh
Confidence 466888899999999999999999999753
No 46
>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.
Probab=75.53 E-value=3.1 Score=38.15 Aligned_cols=29 Identities=21% Similarity=0.502 Sum_probs=24.0
Q ss_pred HHHHHHHhhcCCCCCCCCCHHHHHHHhcc
Q 045568 305 KFIHIGLLCVQEDPADRPNMSSVAVMLAS 333 (379)
Q Consensus 305 ~~~~ial~Cv~~~p~~RPtM~~Vv~~L~~ 333 (379)
.+..+...|++.+|.+||+|.+|.++++.
T Consensus 236 ~~~~li~~~l~~~p~~Rpt~~~i~~~~~~ 264 (267)
T cd08229 236 ELRQLVNMCINPDPEKRPDITYVYDVAKR 264 (267)
T ss_pred HHHHHHHHhcCCCcccCCCHHHHHHHHhh
Confidence 34456668999999999999999998864
No 47
>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul
Probab=75.37 E-value=2.7 Score=38.69 Aligned_cols=29 Identities=24% Similarity=0.489 Sum_probs=25.5
Q ss_pred HHHHHHHhhcCCCCCCCCCHHHHHHHhcc
Q 045568 305 KFIHIGLLCVQEDPADRPNMSSVAVMLAS 333 (379)
Q Consensus 305 ~~~~ial~Cv~~~p~~RPtM~~Vv~~L~~ 333 (379)
.+..+...|.+.+|.+||+|.++++.|+.
T Consensus 237 ~~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 265 (267)
T cd05066 237 ALHQLMLDCWQKDRNERPKFEQIVSILDK 265 (267)
T ss_pred HHHHHHHHHcccCchhCCCHHHHHHHHHh
Confidence 45677789999999999999999999875
No 48
>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3. Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac
Probab=75.20 E-value=2.7 Score=38.68 Aligned_cols=31 Identities=16% Similarity=0.208 Sum_probs=27.4
Q ss_pred HHHHHHHHhhcCCCCCCCCCHHHHHHHhccC
Q 045568 304 LKFIHIGLLCVQEDPADRPNMSSVAVMLASD 334 (379)
Q Consensus 304 ~~~~~ial~Cv~~~p~~RPtM~~Vv~~L~~~ 334 (379)
..+.++...|.+.+|.+||++.++.+.|+.+
T Consensus 242 ~~~~~l~~~~l~~~p~~Rps~~~~~~~l~~~ 272 (273)
T cd05074 242 EDVYELMCQCWSPEPKCRPSFQHLRDQLELI 272 (273)
T ss_pred HHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 4677888999999999999999999998753
No 49
>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly
Probab=75.15 E-value=2.4 Score=39.70 Aligned_cols=30 Identities=23% Similarity=0.359 Sum_probs=26.6
Q ss_pred HHHHHHHhhcCCCCCCCCCHHHHHHHhccC
Q 045568 305 KFIHIGLLCVQEDPADRPNMSSVAVMLASD 334 (379)
Q Consensus 305 ~~~~ial~Cv~~~p~~RPtM~~Vv~~L~~~ 334 (379)
.+..+...|.+.+|.+||+|.+|...|+..
T Consensus 250 ~l~~li~~~l~~~p~~Rpt~~~v~~~l~~~ 279 (288)
T cd05093 250 EVYDLMLGCWQREPHMRLNIKEIHSLLQNL 279 (288)
T ss_pred HHHHHHHHHccCChhhCCCHHHHHHHHHHH
Confidence 467788999999999999999999988765
No 50
>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr
Probab=74.88 E-value=2.8 Score=38.64 Aligned_cols=29 Identities=24% Similarity=0.422 Sum_probs=25.4
Q ss_pred HHHHHHHhhcCCCCCCCCCHHHHHHHhcc
Q 045568 305 KFIHIGLLCVQEDPADRPNMSSVAVMLAS 333 (379)
Q Consensus 305 ~~~~ial~Cv~~~p~~RPtM~~Vv~~L~~ 333 (379)
.+.++...|.+.+|.+||+|.+|+.+|+.
T Consensus 239 ~~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 267 (269)
T cd05065 239 ALHQLMLDCWQKDRNARPKFGQIVSTLDK 267 (269)
T ss_pred HHHHHHHHHcCCChhhCcCHHHHHHHHHh
Confidence 45677889999999999999999999874
No 51
>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase. Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well
Probab=74.87 E-value=3.2 Score=38.48 Aligned_cols=28 Identities=29% Similarity=0.478 Sum_probs=24.7
Q ss_pred HHHHHHHhhcCCCCCCCCCHHHHHHHhc
Q 045568 305 KFIHIGLLCVQEDPADRPNMSSVAVMLA 332 (379)
Q Consensus 305 ~~~~ial~Cv~~~p~~RPtM~~Vv~~L~ 332 (379)
.+.++...|++.+|.+||++.+|++.|+
T Consensus 249 ~~~~~i~~cl~~~p~~Rps~~~vl~~l~ 276 (277)
T cd05036 249 PVYRIMTDCWQHTPEDRPNFATILERIQ 276 (277)
T ss_pred HHHHHHHHHcCCCcccCcCHHHHHHHhh
Confidence 4567778999999999999999999875
No 52
>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re
Probab=74.67 E-value=3.1 Score=38.02 Aligned_cols=29 Identities=21% Similarity=0.274 Sum_probs=25.0
Q ss_pred HHHHHHHhhcCCCCCCCCCHHHHHHHhcc
Q 045568 305 KFIHIGLLCVQEDPADRPNMSSVAVMLAS 333 (379)
Q Consensus 305 ~~~~ial~Cv~~~p~~RPtM~~Vv~~L~~ 333 (379)
.+..+...|.+.+|.+||++.++++.|+.
T Consensus 227 ~~~~li~~~l~~~p~~Rpt~~~l~~~l~~ 255 (256)
T cd05082 227 VVYDVMKQCWHLDAATRPSFLQLREQLEH 255 (256)
T ss_pred HHHHHHHHHhcCChhhCcCHHHHHHHHhc
Confidence 35567779999999999999999999874
No 53
>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase). Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It
Probab=74.18 E-value=2.5 Score=39.25 Aligned_cols=30 Identities=23% Similarity=0.429 Sum_probs=26.3
Q ss_pred HHHHHHHhhcCCCCCCCCCHHHHHHHhccC
Q 045568 305 KFIHIGLLCVQEDPADRPNMSSVAVMLASD 334 (379)
Q Consensus 305 ~~~~ial~Cv~~~p~~RPtM~~Vv~~L~~~ 334 (379)
.+..+...|++.+|++||++.+|+++|+..
T Consensus 247 ~~~~li~~~l~~~p~~Rps~~~~~~~l~~~ 276 (280)
T cd05043 247 ELFAVMACCWALDPEERPSFSQLVQCLTDF 276 (280)
T ss_pred HHHHHHHHHcCCChhhCCCHHHHHHHHHHH
Confidence 456788899999999999999999999764
No 54
>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=73.68 E-value=2.7 Score=39.72 Aligned_cols=30 Identities=17% Similarity=0.233 Sum_probs=25.8
Q ss_pred HHHHHHHhhcCCCCCCCCCHHHHHHHhccC
Q 045568 305 KFIHIGLLCVQEDPADRPNMSSVAVMLASD 334 (379)
Q Consensus 305 ~~~~ial~Cv~~~p~~RPtM~~Vv~~L~~~ 334 (379)
.+..+...|.+.+|.+||+|.+|++.|..+
T Consensus 267 ~~~~li~~cl~~~p~~Rps~~e~l~~l~~~ 296 (304)
T cd05101 267 ELYMMMRDCWHAIPSHRPTFKQLVEDLDRI 296 (304)
T ss_pred HHHHHHHHHcccChhhCCCHHHHHHHHHHH
Confidence 455677789999999999999999999764
No 55
>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros. Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male
Probab=73.59 E-value=3.9 Score=37.51 Aligned_cols=28 Identities=25% Similarity=0.574 Sum_probs=24.5
Q ss_pred HHHHHHHhhcCCCCCCCCCHHHHHHHhc
Q 045568 305 KFIHIGLLCVQEDPADRPNMSSVAVMLA 332 (379)
Q Consensus 305 ~~~~ial~Cv~~~p~~RPtM~~Vv~~L~ 332 (379)
.+..+...|.+.+|.+||+|.+|.++|+
T Consensus 241 ~~~~li~~~l~~~p~~Rp~~~~i~~~l~ 268 (269)
T cd05044 241 KIYQLMTNCWAQDPSERPTFDRIQEILQ 268 (269)
T ss_pred HHHHHHHHHcCCCcccCCCHHHHHHHHh
Confidence 3556777999999999999999999885
No 56
>PHA02988 hypothetical protein; Provisional
Probab=73.39 E-value=3.5 Score=38.69 Aligned_cols=29 Identities=24% Similarity=0.334 Sum_probs=24.4
Q ss_pred HHHHHHhhcCCCCCCCCCHHHHHHHhccC
Q 045568 306 FIHIGLLCVQEDPADRPNMSSVAVMLASD 334 (379)
Q Consensus 306 ~~~ial~Cv~~~p~~RPtM~~Vv~~L~~~ 334 (379)
+..+...|.+.+|.+||+|.++++.|+..
T Consensus 251 l~~li~~cl~~dp~~Rps~~ell~~l~~~ 279 (283)
T PHA02988 251 IKCIVEACTSHDSIKRPNIKEILYNLSLY 279 (283)
T ss_pred HHHHHHHHhcCCcccCcCHHHHHHHHHHH
Confidence 44566689999999999999999998753
No 57
>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a
Probab=73.34 E-value=3.7 Score=37.52 Aligned_cols=30 Identities=23% Similarity=0.437 Sum_probs=26.0
Q ss_pred HHHHHHHhhcCCCCCCCCCHHHHHHHhccC
Q 045568 305 KFIHIGLLCVQEDPADRPNMSSVAVMLASD 334 (379)
Q Consensus 305 ~~~~ial~Cv~~~p~~RPtM~~Vv~~L~~~ 334 (379)
.+..+...|++.+|.+||++.+|+++|...
T Consensus 236 ~~~~~i~~cl~~~p~~Rp~~~~il~~~~~~ 265 (267)
T cd08224 236 ELRDLVSRCINPDPEKRPDISYVLQVAKEM 265 (267)
T ss_pred HHHHHHHHHcCCCcccCCCHHHHHHHHHHh
Confidence 455677889999999999999999999764
No 58
>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase. Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki
Probab=73.17 E-value=3.6 Score=37.51 Aligned_cols=29 Identities=17% Similarity=0.362 Sum_probs=25.2
Q ss_pred HHHHHHHhhcCCCCCCCCCHHHHHHHhcc
Q 045568 305 KFIHIGLLCVQEDPADRPNMSSVAVMLAS 333 (379)
Q Consensus 305 ~~~~ial~Cv~~~p~~RPtM~~Vv~~L~~ 333 (379)
.+..+...|.+.+|.+||++.+++..|+.
T Consensus 225 ~~~~li~~~l~~~p~~Rp~~~~l~~~l~~ 253 (254)
T cd05083 225 DVYVLMTSCWETEPKKRPSFHKLREKLEK 253 (254)
T ss_pred HHHHHHHHHcCCChhhCcCHHHHHHHHcc
Confidence 45567789999999999999999999864
No 59
>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=73.13 E-value=6.1 Score=37.94 Aligned_cols=31 Identities=19% Similarity=0.266 Sum_probs=26.9
Q ss_pred HHHHHHHhhcCCCCCCCCCHHHHHHHhccCC
Q 045568 305 KFIHIGLLCVQEDPADRPNMSSVAVMLASDA 335 (379)
Q Consensus 305 ~~~~ial~Cv~~~p~~RPtM~~Vv~~L~~~~ 335 (379)
.+..+...|.+.+|.+||+|.++++.|..+.
T Consensus 264 ~l~~li~~cl~~~p~~Rps~~ell~~l~~~~ 294 (334)
T cd05100 264 ELYMIMRECWHAVPSQRPTFKQLVEDLDRVL 294 (334)
T ss_pred HHHHHHHHHcccChhhCcCHHHHHHHHHHHh
Confidence 4667788999999999999999999997653
No 60
>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt
Probab=72.52 E-value=3.3 Score=38.61 Aligned_cols=28 Identities=18% Similarity=0.438 Sum_probs=24.2
Q ss_pred HHHHHHHhhcCCCCCCCCCHHHHHHHhc
Q 045568 305 KFIHIGLLCVQEDPADRPNMSSVAVMLA 332 (379)
Q Consensus 305 ~~~~ial~Cv~~~p~~RPtM~~Vv~~L~ 332 (379)
.+..+...|.+.+|.+||+|.+|++.|.
T Consensus 247 ~~~~li~~cl~~~p~~Rps~~~il~~L~ 274 (274)
T cd05076 247 ELATLISQCLTYEPTQRPSFRTILRDLT 274 (274)
T ss_pred HHHHHHHHHcccChhhCcCHHHHHHhhC
Confidence 4567778999999999999999998873
No 61
>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk. Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r
Probab=72.43 E-value=3.9 Score=37.42 Aligned_cols=29 Identities=24% Similarity=0.552 Sum_probs=25.5
Q ss_pred HHHHHHHhhcCCCCCCCCCHHHHHHHhcc
Q 045568 305 KFIHIGLLCVQEDPADRPNMSSVAVMLAS 333 (379)
Q Consensus 305 ~~~~ial~Cv~~~p~~RPtM~~Vv~~L~~ 333 (379)
.+..+...|++.+|.+||+|.++.+.|+.
T Consensus 231 ~~~~li~~~l~~~p~~Rpt~~~l~~~l~~ 259 (260)
T cd05070 231 SLHELMLQCWKKDPEERPTFEYLQSFLED 259 (260)
T ss_pred HHHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence 46678889999999999999999998863
No 62
>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase
Probab=72.42 E-value=3.9 Score=37.45 Aligned_cols=30 Identities=23% Similarity=0.483 Sum_probs=25.6
Q ss_pred HHHHHHHhhcCCCCCCCCCHHHHHHHhccC
Q 045568 305 KFIHIGLLCVQEDPADRPNMSSVAVMLASD 334 (379)
Q Consensus 305 ~~~~ial~Cv~~~p~~RPtM~~Vv~~L~~~ 334 (379)
.+.++...|.+.+|.+||++.+|++.|+..
T Consensus 236 ~~~~li~~cl~~~p~~Rp~~~~vl~~~~~~ 265 (267)
T cd08228 236 KLRELVSMCIYPDPDQRPDIGYVHQIAKQM 265 (267)
T ss_pred HHHHHHHHHCCCCcccCcCHHHHHHHHHHh
Confidence 355666789999999999999999998764
No 63
>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt
Probab=72.34 E-value=4.1 Score=37.61 Aligned_cols=28 Identities=29% Similarity=0.434 Sum_probs=24.8
Q ss_pred HHHHHHHhhcCCCCCCCCCHHHHHHHhc
Q 045568 305 KFIHIGLLCVQEDPADRPNMSSVAVMLA 332 (379)
Q Consensus 305 ~~~~ial~Cv~~~p~~RPtM~~Vv~~L~ 332 (379)
.+..+...|++.+|.+||++.+|+++|+
T Consensus 252 ~~~~li~~~l~~~p~~Rp~~~eil~~l~ 279 (280)
T cd05049 252 EVYDIMLGCWKRDPQQRINIKDIHERLQ 279 (280)
T ss_pred HHHHHHHHHcCCCcccCCCHHHHHHHhh
Confidence 4567778999999999999999999985
No 64
>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp
Probab=72.18 E-value=3.1 Score=40.28 Aligned_cols=30 Identities=23% Similarity=0.420 Sum_probs=26.1
Q ss_pred HHHHHHHhhcCCCCCCCCCHHHHHHHhccC
Q 045568 305 KFIHIGLLCVQEDPADRPNMSSVAVMLASD 334 (379)
Q Consensus 305 ~~~~ial~Cv~~~p~~RPtM~~Vv~~L~~~ 334 (379)
.+.++.+.|.+.+|.+||++.+|++.|+..
T Consensus 310 ~~~~~~~~cl~~~p~~Rps~~eil~~l~~~ 339 (343)
T cd05103 310 EMYQTMLDCWHGEPSQRPTFSELVEHLGNL 339 (343)
T ss_pred HHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence 466778899999999999999999998753
No 65
>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological
Probab=71.83 E-value=3.9 Score=37.72 Aligned_cols=29 Identities=24% Similarity=0.421 Sum_probs=25.5
Q ss_pred HHHHHHHHhhcCCCCCCCCCHHHHHHHhc
Q 045568 304 LKFIHIGLLCVQEDPADRPNMSSVAVMLA 332 (379)
Q Consensus 304 ~~~~~ial~Cv~~~p~~RPtM~~Vv~~L~ 332 (379)
..+..+...|++.+|.+||++.+++..|+
T Consensus 248 ~~~~~li~~~l~~~p~~Rpt~~~l~~~l~ 276 (277)
T cd05032 248 DKLLELMRMCWQYNPKMRPTFLEIVSSLK 276 (277)
T ss_pred HHHHHHHHHHcCCChhhCCCHHHHHHHhc
Confidence 35667888999999999999999999886
No 66
>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k
Probab=71.79 E-value=3.8 Score=37.14 Aligned_cols=28 Identities=29% Similarity=0.501 Sum_probs=24.6
Q ss_pred HHHHHHHhhcCCCCCCCCCHHHHHHHhc
Q 045568 305 KFIHIGLLCVQEDPADRPNMSSVAVMLA 332 (379)
Q Consensus 305 ~~~~ial~Cv~~~p~~RPtM~~Vv~~L~ 332 (379)
.+..+...|.+.+|.+||++.+|++.|.
T Consensus 223 ~~~~li~~~l~~~p~~Rp~~~ell~~l~ 250 (251)
T cd05041 223 EIYRLMLQCWAYDPENRPSFSEIYNELQ 250 (251)
T ss_pred HHHHHHHHHhccChhhCcCHHHHHHHhh
Confidence 4666778899999999999999999885
No 67
>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes. Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an
Probab=71.78 E-value=4.4 Score=37.14 Aligned_cols=29 Identities=24% Similarity=0.558 Sum_probs=24.5
Q ss_pred HHHHHHHhhcCCCCCCCCCHHHHHHHhcc
Q 045568 305 KFIHIGLLCVQEDPADRPNMSSVAVMLAS 333 (379)
Q Consensus 305 ~~~~ial~Cv~~~p~~RPtM~~Vv~~L~~ 333 (379)
.+..+...|++.+|.+||+|.+|++.|+.
T Consensus 231 ~~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 259 (260)
T cd05069 231 SLHELMKLCWKKDPDERPTFEYIQSFLED 259 (260)
T ss_pred HHHHHHHHHccCCcccCcCHHHHHHHHhc
Confidence 34556678999999999999999999864
No 68
>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=71.35 E-value=3.9 Score=38.66 Aligned_cols=30 Identities=17% Similarity=0.248 Sum_probs=25.9
Q ss_pred HHHHHHHhhcCCCCCCCCCHHHHHHHhccC
Q 045568 305 KFIHIGLLCVQEDPADRPNMSSVAVMLASD 334 (379)
Q Consensus 305 ~~~~ial~Cv~~~p~~RPtM~~Vv~~L~~~ 334 (379)
.+.++...|.+.+|.+||+|.+|++.|+.+
T Consensus 270 ~~~~li~~~l~~~p~~Rps~~evl~~l~~~ 299 (307)
T cd05098 270 ELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 299 (307)
T ss_pred HHHHHHHHHcccChhhCcCHHHHHHHHHHH
Confidence 455677899999999999999999999764
No 69
>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta
Probab=71.03 E-value=3.6 Score=38.42 Aligned_cols=31 Identities=23% Similarity=0.419 Sum_probs=26.9
Q ss_pred HHHHHHHHhhcCCCCCCCCCHHHHHHHhccC
Q 045568 304 LKFIHIGLLCVQEDPADRPNMSSVAVMLASD 334 (379)
Q Consensus 304 ~~~~~ial~Cv~~~p~~RPtM~~Vv~~L~~~ 334 (379)
..+..+...|++.+|.+||+|.++++.|+..
T Consensus 248 ~~~~~li~~~l~~~p~~Rps~~~ll~~l~~~ 278 (288)
T cd05061 248 ERVTDLMRMCWQFNPKMRPTFLEIVNLLKDD 278 (288)
T ss_pred HHHHHHHHHHcCCChhHCcCHHHHHHHHHhh
Confidence 3566778899999999999999999999864
No 70
>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src. Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo
Probab=70.92 E-value=4.6 Score=37.11 Aligned_cols=30 Identities=17% Similarity=0.432 Sum_probs=26.5
Q ss_pred HHHHHHHHhhcCCCCCCCCCHHHHHHHhcc
Q 045568 304 LKFIHIGLLCVQEDPADRPNMSSVAVMLAS 333 (379)
Q Consensus 304 ~~~~~ial~Cv~~~p~~RPtM~~Vv~~L~~ 333 (379)
..+.++...|++.+|.+||++.++.++|+.
T Consensus 230 ~~l~~li~~~l~~~p~~Rp~~~~~~~~l~~ 259 (262)
T cd05071 230 ESLHDLMCQCWRKEPEERPTFEYLQAFLED 259 (262)
T ss_pred HHHHHHHHHHccCCcccCCCHHHHHHHHHH
Confidence 456788899999999999999999999874
No 71
>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase. Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and
Probab=70.17 E-value=5.2 Score=36.40 Aligned_cols=28 Identities=29% Similarity=0.617 Sum_probs=24.6
Q ss_pred HHHHHHHhhcCCCCCCCCCHHHHHHHhc
Q 045568 305 KFIHIGLLCVQEDPADRPNMSSVAVMLA 332 (379)
Q Consensus 305 ~~~~ial~Cv~~~p~~RPtM~~Vv~~L~ 332 (379)
.+..+...|.+.+|.+||++.+|++.|.
T Consensus 229 ~~~~li~~~l~~~p~~Rps~~~~~~~l~ 256 (257)
T cd05040 229 DIYNVMLQCWAHNPADRPTFAALREFLP 256 (257)
T ss_pred HHHHHHHHHCCCCcccCCCHHHHHHHhc
Confidence 4667778999999999999999999875
No 72
>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1. Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.
Probab=70.13 E-value=4.2 Score=38.24 Aligned_cols=30 Identities=20% Similarity=0.448 Sum_probs=26.0
Q ss_pred HHHHHHHhhcCCCCCCCCCHHHHHHHhccC
Q 045568 305 KFIHIGLLCVQEDPADRPNMSSVAVMLASD 334 (379)
Q Consensus 305 ~~~~ial~Cv~~~p~~RPtM~~Vv~~L~~~ 334 (379)
.+.++...|++.+|.+||++.+++++|+..
T Consensus 246 ~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 275 (297)
T cd05089 246 EVYELMRQCWRDRPYERPPFAQISVQLSRM 275 (297)
T ss_pred HHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence 456778899999999999999999998754
No 73
>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept
Probab=70.12 E-value=4.4 Score=38.34 Aligned_cols=29 Identities=21% Similarity=0.495 Sum_probs=25.6
Q ss_pred HHHHHHHhhcCCCCCCCCCHHHHHHHhcc
Q 045568 305 KFIHIGLLCVQEDPADRPNMSSVAVMLAS 333 (379)
Q Consensus 305 ~~~~ial~Cv~~~p~~RPtM~~Vv~~L~~ 333 (379)
.+.++...|++.+|++||++.+|++.|+.
T Consensus 272 ~~~~li~~cl~~~p~~Rpt~~ell~~l~~ 300 (302)
T cd05055 272 EIYDIMKTCWDADPLKRPTFKQIVQLIGK 300 (302)
T ss_pred HHHHHHHHHcCCCchhCcCHHHHHHHHHh
Confidence 46678889999999999999999999864
No 74
>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase. Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa
Probab=69.92 E-value=4.8 Score=36.84 Aligned_cols=29 Identities=21% Similarity=0.535 Sum_probs=25.0
Q ss_pred HHHHHHHhhcCCCCCCCCCHHHHHHHhcc
Q 045568 305 KFIHIGLLCVQEDPADRPNMSSVAVMLAS 333 (379)
Q Consensus 305 ~~~~ial~Cv~~~p~~RPtM~~Vv~~L~~ 333 (379)
.+..+...|.+.+|.+||++.++..+|+.
T Consensus 231 ~~~~~i~~~l~~~p~~Rp~~~~l~~~L~~ 259 (260)
T cd05073 231 ELYNIMMRCWKNRPEERPTFEYIQSVLDD 259 (260)
T ss_pred HHHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence 45667789999999999999999999863
No 75
>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor
Probab=69.80 E-value=4.4 Score=37.37 Aligned_cols=29 Identities=24% Similarity=0.479 Sum_probs=24.9
Q ss_pred HHHHHHHhhcCCCCCCCCCHHHHHHHhcc
Q 045568 305 KFIHIGLLCVQEDPADRPNMSSVAVMLAS 333 (379)
Q Consensus 305 ~~~~ial~Cv~~~p~~RPtM~~Vv~~L~~ 333 (379)
.+.++...|.+.+|.+||+|.++.+.|..
T Consensus 236 ~~~~li~~c~~~~p~~RP~~~~i~~~l~~ 264 (266)
T cd05064 236 LLHQLMLDCWQKERGERPRFSQIHSILSK 264 (266)
T ss_pred HHHHHHHHHcCCCchhCCCHHHHHHHHHh
Confidence 45667788999999999999999998864
No 76
>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan
Probab=69.76 E-value=4.5 Score=36.54 Aligned_cols=28 Identities=36% Similarity=0.584 Sum_probs=24.1
Q ss_pred HHHHHHHhhcCCCCCCCCCHHHHHHHhc
Q 045568 305 KFIHIGLLCVQEDPADRPNMSSVAVMLA 332 (379)
Q Consensus 305 ~~~~ial~Cv~~~p~~RPtM~~Vv~~L~ 332 (379)
.+..+...|++.+|.+||++.+++..|+
T Consensus 235 ~~~~li~~~l~~~p~~Rps~~~l~~~l~ 262 (262)
T cd00192 235 ELYELMLSCWQLDPEDRPTFSELVERLE 262 (262)
T ss_pred HHHHHHHHHccCCcccCcCHHHHHHhhC
Confidence 4566777899999999999999998874
No 77
>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=69.64 E-value=4.9 Score=37.33 Aligned_cols=29 Identities=28% Similarity=0.499 Sum_probs=24.4
Q ss_pred HHHHHHHhhcCCCCCCCCCHHHHHHHhcc
Q 045568 305 KFIHIGLLCVQEDPADRPNMSSVAVMLAS 333 (379)
Q Consensus 305 ~~~~ial~Cv~~~p~~RPtM~~Vv~~L~~ 333 (379)
.+..+...|.+.+|.+||++.++.++|..
T Consensus 254 ~~~~li~~cl~~~p~~Rp~~~~i~~~l~~ 282 (283)
T cd05090 254 RMYSLMTECWQEGPSRRPRFKDIHTRLRS 282 (283)
T ss_pred HHHHHHHHHcccCcccCcCHHHHHHHhhc
Confidence 34556678999999999999999998863
No 78
>PF13956 Ibs_toxin: Toxin Ibs, type I toxin-antitoxin system
Probab=69.50 E-value=2.4 Score=22.75 Aligned_cols=15 Identities=53% Similarity=0.820 Sum_probs=10.0
Q ss_pred CchHHHHHHHHHHHH
Q 045568 1 MNMNIILVFLSVLSF 15 (379)
Q Consensus 1 ~~~~~~~~~~~~~~~ 15 (379)
|+..||+++|++++|
T Consensus 2 Mk~vIIlvvLLliSf 16 (19)
T PF13956_consen 2 MKLVIILVVLLLISF 16 (19)
T ss_pred ceehHHHHHHHhccc
Confidence 666777777666654
No 79
>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk. Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr
Probab=68.61 E-value=5 Score=36.66 Aligned_cols=29 Identities=24% Similarity=0.550 Sum_probs=25.2
Q ss_pred HHHHHHHhhcCCCCCCCCCHHHHHHHhcc
Q 045568 305 KFIHIGLLCVQEDPADRPNMSSVAVMLAS 333 (379)
Q Consensus 305 ~~~~ial~Cv~~~p~~RPtM~~Vv~~L~~ 333 (379)
.+..+...|.+.+|++||++.++...|+.
T Consensus 231 ~~~~li~~~l~~~p~~Rp~~~~l~~~l~~ 259 (260)
T cd05067 231 ELYELMRLCWKEKPEERPTFEYLRSVLED 259 (260)
T ss_pred HHHHHHHHHccCChhhCCCHHHHHHHhhc
Confidence 46667779999999999999999999863
No 80
>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti
Probab=68.06 E-value=4.5 Score=39.85 Aligned_cols=29 Identities=21% Similarity=0.548 Sum_probs=25.0
Q ss_pred HHHHHHHhhcCCCCCCCCCHHHHHHHhcc
Q 045568 305 KFIHIGLLCVQEDPADRPNMSSVAVMLAS 333 (379)
Q Consensus 305 ~~~~ial~Cv~~~p~~RPtM~~Vv~~L~~ 333 (379)
.+..+...|.+.+|.+||++.+|+++|+.
T Consensus 343 ~l~~li~~cl~~dp~~RPs~~~l~~~l~~ 371 (374)
T cd05106 343 EIYSIMKMCWNLEPTERPTFSQISQLIQR 371 (374)
T ss_pred HHHHHHHHHcCCChhhCcCHHHHHHHHHH
Confidence 35566678999999999999999999975
No 81
>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3. Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r
Probab=67.88 E-value=5.7 Score=36.94 Aligned_cols=30 Identities=17% Similarity=0.204 Sum_probs=25.4
Q ss_pred HHHHHHHhhcCCCCCCCCCHHHHHHHhccC
Q 045568 305 KFIHIGLLCVQEDPADRPNMSSVAVMLASD 334 (379)
Q Consensus 305 ~~~~ial~Cv~~~p~~RPtM~~Vv~~L~~~ 334 (379)
.+..+...|...+|.+||++.+++++|...
T Consensus 239 ~~~~li~~c~~~~p~~Rps~~el~~~l~~~ 268 (279)
T cd05111 239 DVYMVMVKCWMIDENVRPTFKELANEFTRM 268 (279)
T ss_pred HHHHHHHHHcCCCcccCcCHHHHHHHHHHH
Confidence 345567789999999999999999998764
No 82
>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki
Probab=67.71 E-value=4.7 Score=36.63 Aligned_cols=29 Identities=21% Similarity=0.369 Sum_probs=25.0
Q ss_pred HHHHHHHHhhcCCCCCCCCCHHHHHHHhc
Q 045568 304 LKFIHIGLLCVQEDPADRPNMSSVAVMLA 332 (379)
Q Consensus 304 ~~~~~ial~Cv~~~p~~RPtM~~Vv~~L~ 332 (379)
..+..+...|...+|.+||++.+|++.|+
T Consensus 231 ~~~~~li~~~l~~~p~~Rpt~~~il~~l~ 259 (259)
T cd05037 231 AELANLINQCWTYDPTKRPSFRAILRDLN 259 (259)
T ss_pred hHHHHHHHHHhccChhhCCCHHHHHHhcC
Confidence 45667778999999999999999999874
No 83
>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom
Probab=67.04 E-value=5 Score=37.00 Aligned_cols=28 Identities=18% Similarity=0.412 Sum_probs=23.6
Q ss_pred HHHHHHHhhcCCCCCCCCCHHHHHHHhc
Q 045568 305 KFIHIGLLCVQEDPADRPNMSSVAVMLA 332 (379)
Q Consensus 305 ~~~~ial~Cv~~~p~~RPtM~~Vv~~L~ 332 (379)
.+..+...|.+.+|.+||++.++++.|+
T Consensus 235 ~~~~li~~cl~~dp~~Rp~~~~il~~~~ 262 (262)
T cd05077 235 ELADLMTHCMNYDPNQRPFFRAIMRDIN 262 (262)
T ss_pred HHHHHHHHHcCCChhhCcCHHHHHHhcC
Confidence 3456677899999999999999998764
No 84
>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory
Probab=66.35 E-value=5.5 Score=37.00 Aligned_cols=28 Identities=21% Similarity=0.286 Sum_probs=24.3
Q ss_pred HHHHHHHhhcCCCCCCCCCHHHHHHHhc
Q 045568 305 KFIHIGLLCVQEDPADRPNMSSVAVMLA 332 (379)
Q Consensus 305 ~~~~ial~Cv~~~p~~RPtM~~Vv~~L~ 332 (379)
.+..+...|++.+|.+||++.+|.+.|+
T Consensus 252 ~~~~li~~cl~~~P~~Rp~~~~l~~~l~ 279 (280)
T cd05092 252 EVYAIMQGCWQREPQQRMVIKDIHSRLQ 279 (280)
T ss_pred HHHHHHHHHccCChhhCCCHHHHHHHHh
Confidence 3556778899999999999999999885
No 85
>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=65.42 E-value=6.5 Score=37.30 Aligned_cols=30 Identities=17% Similarity=0.298 Sum_probs=25.9
Q ss_pred HHHHHHHhhcCCCCCCCCCHHHHHHHhccC
Q 045568 305 KFIHIGLLCVQEDPADRPNMSSVAVMLASD 334 (379)
Q Consensus 305 ~~~~ial~Cv~~~p~~RPtM~~Vv~~L~~~ 334 (379)
.+..+...|.+.+|.+||++.++++.|...
T Consensus 264 ~l~~li~~cl~~~p~~Rps~~~ll~~l~~~ 293 (314)
T cd05099 264 ELYMLMRECWHAVPTQRPTFKQLVEALDKV 293 (314)
T ss_pred HHHHHHHHHcCCCcccCcCHHHHHHHHHHH
Confidence 455677899999999999999999998764
No 86
>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2. Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A
Probab=64.26 E-value=6 Score=37.40 Aligned_cols=30 Identities=23% Similarity=0.441 Sum_probs=25.7
Q ss_pred HHHHHHHhhcCCCCCCCCCHHHHHHHhccC
Q 045568 305 KFIHIGLLCVQEDPADRPNMSSVAVMLASD 334 (379)
Q Consensus 305 ~~~~ial~Cv~~~p~~RPtM~~Vv~~L~~~ 334 (379)
.+..+...|.+.+|.+||++.+++.+|+.+
T Consensus 251 ~~~~li~~~l~~~p~~Rp~~~~il~~l~~~ 280 (303)
T cd05088 251 EVYDLMRQCWREKPYERPSFAQILVSLNRM 280 (303)
T ss_pred HHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence 356778899999999999999999988653
No 87
>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t
Probab=63.95 E-value=7.5 Score=35.39 Aligned_cols=29 Identities=24% Similarity=0.575 Sum_probs=25.2
Q ss_pred HHHHHHHhhcCCCCCCCCCHHHHHHHhcc
Q 045568 305 KFIHIGLLCVQEDPADRPNMSSVAVMLAS 333 (379)
Q Consensus 305 ~~~~ial~Cv~~~p~~RPtM~~Vv~~L~~ 333 (379)
.+.++...|.+.+|.+||++.++.+.|+.
T Consensus 232 ~~~~~i~~~l~~~p~~Rp~~~~l~~~l~~ 260 (261)
T cd05034 232 ELYDLMLQCWDKDPEERPTFEYLQSFLED 260 (261)
T ss_pred HHHHHHHHHcccCcccCCCHHHHHHHHhc
Confidence 46677889999999999999999998863
No 88
>smart00219 TyrKc Tyrosine kinase, catalytic domain. Phosphotransferases. Tyrosine-specific kinase subfamily.
Probab=63.90 E-value=6.4 Score=35.54 Aligned_cols=27 Identities=37% Similarity=0.696 Sum_probs=23.2
Q ss_pred HHHHHHHhhcCCCCCCCCCHHHHHHHh
Q 045568 305 KFIHIGLLCVQEDPADRPNMSSVAVML 331 (379)
Q Consensus 305 ~~~~ial~Cv~~~p~~RPtM~~Vv~~L 331 (379)
.+.++...|+..+|.+||++.+++++|
T Consensus 232 ~~~~~i~~~l~~~p~~Rpt~~~ll~~l 258 (258)
T smart00219 232 EIYKLMLQCWAEDPEDRPTFSELVEIL 258 (258)
T ss_pred HHHHHHHHHCcCChhhCcCHHHHHhhC
Confidence 456677899999999999999998765
No 89
>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi
Probab=62.68 E-value=6.4 Score=35.64 Aligned_cols=27 Identities=15% Similarity=0.251 Sum_probs=22.6
Q ss_pred HHHHHHHHhhcCCCCCCCCCHHHHHHH
Q 045568 304 LKFIHIGLLCVQEDPADRPNMSSVAVM 330 (379)
Q Consensus 304 ~~~~~ial~Cv~~~p~~RPtM~~Vv~~ 330 (379)
..+..+...|++.+|.+||+|.+|++.
T Consensus 236 ~~~~~l~~~~l~~~p~~Rp~~~~il~~ 262 (265)
T cd08217 236 SELNEVIKSMLNVDPDKRPSTEELLQL 262 (265)
T ss_pred HHHHHHHHHHccCCcccCCCHHHHhhC
Confidence 345677789999999999999999864
No 90
>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-
Probab=61.99 E-value=6.2 Score=39.50 Aligned_cols=30 Identities=20% Similarity=0.410 Sum_probs=26.4
Q ss_pred HHHHHHHhhcCCCCCCCCCHHHHHHHhccC
Q 045568 305 KFIHIGLLCVQEDPADRPNMSSVAVMLASD 334 (379)
Q Consensus 305 ~~~~ial~Cv~~~p~~RPtM~~Vv~~L~~~ 334 (379)
.+..+...|.+.+|.+||++.+|+++|+..
T Consensus 368 ~l~~li~~cl~~dP~~RPt~~~l~~~l~~l 397 (400)
T cd05105 368 EVYDIMVKCWNSEPEKRPSFLHLSDIVESL 397 (400)
T ss_pred HHHHHHHHHCccCHhHCcCHHHHHHHHHHH
Confidence 466788899999999999999999999753
No 91
>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4. Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin
Probab=61.46 E-value=8 Score=36.49 Aligned_cols=30 Identities=17% Similarity=0.285 Sum_probs=26.0
Q ss_pred HHHHHHHhhcCCCCCCCCCHHHHHHHhccC
Q 045568 305 KFIHIGLLCVQEDPADRPNMSSVAVMLASD 334 (379)
Q Consensus 305 ~~~~ial~Cv~~~p~~RPtM~~Vv~~L~~~ 334 (379)
.+..+...|...+|++||+|.+++++|...
T Consensus 239 ~~~~li~~c~~~~p~~Rp~~~~l~~~l~~~ 268 (303)
T cd05110 239 DVYMVMVKCWMIDADSRPKFKELAAEFSRM 268 (303)
T ss_pred HHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence 456777899999999999999999998754
No 92
>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain. Phosphotransferases. Serine or threonine-specific kinase subfamily.
Probab=61.01 E-value=7.9 Score=34.17 Aligned_cols=26 Identities=12% Similarity=0.024 Sum_probs=22.9
Q ss_pred HHHHHHHHhhcCCCCCCCCCHHHHHH
Q 045568 304 LKFIHIGLLCVQEDPADRPNMSSVAV 329 (379)
Q Consensus 304 ~~~~~ial~Cv~~~p~~RPtM~~Vv~ 329 (379)
..+.++..+|+..+|.+||++.++++
T Consensus 215 ~~~~~~i~~~l~~~p~~Rp~~~~~~~ 240 (244)
T smart00220 215 PEAKDLIRKLLVKDPEKRLTAEEALQ 240 (244)
T ss_pred HHHHHHHHHHccCCchhccCHHHHhh
Confidence 45777888999999999999999986
No 93
>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor
Probab=60.77 E-value=7.9 Score=36.75 Aligned_cols=30 Identities=17% Similarity=0.293 Sum_probs=25.9
Q ss_pred HHHHHHHhhcCCCCCCCCCHHHHHHHhccC
Q 045568 305 KFIHIGLLCVQEDPADRPNMSSVAVMLASD 334 (379)
Q Consensus 305 ~~~~ial~Cv~~~p~~RPtM~~Vv~~L~~~ 334 (379)
.+..+...|.+.+|.+||++.+++..|...
T Consensus 239 ~~~~li~~cl~~~p~~Rps~~~l~~~l~~~ 268 (316)
T cd05108 239 DVYMIMVKCWMIDADSRPKFRELIIEFSKM 268 (316)
T ss_pred HHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence 466778899999999999999999988654
No 94
>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4. Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s
Probab=60.70 E-value=9.5 Score=35.08 Aligned_cols=28 Identities=25% Similarity=0.515 Sum_probs=24.9
Q ss_pred HHHHHHHhhcCCCCCCCCCHHHHHHHhc
Q 045568 305 KFIHIGLLCVQEDPADRPNMSSVAVMLA 332 (379)
Q Consensus 305 ~~~~ial~Cv~~~p~~RPtM~~Vv~~L~ 332 (379)
.+..+...|++.+|.+||++.+++.+|.
T Consensus 247 ~l~~~i~~~l~~~p~~Rp~~~~~l~~l~ 274 (275)
T cd05046 247 RLYKLMTRCWAVNPKDRPSFSELVSALG 274 (275)
T ss_pred HHHHHHHHHcCCCcccCCCHHHHHHHhc
Confidence 4667888999999999999999999875
No 95
>smart00750 KIND kinase non-catalytic C-lobe domain. It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features
Probab=59.67 E-value=9 Score=32.70 Aligned_cols=28 Identities=14% Similarity=0.209 Sum_probs=24.6
Q ss_pred HHHHHHHhhcCCCCCCCCCHHHHHHHhc
Q 045568 305 KFIHIGLLCVQEDPADRPNMSSVAVMLA 332 (379)
Q Consensus 305 ~~~~ial~Cv~~~p~~RPtM~~Vv~~L~ 332 (379)
.+.++...|.+.+|.+||++.++++.+.
T Consensus 140 ~~~~~i~~cl~~~p~~Rp~~~~ll~~~~ 167 (176)
T smart00750 140 SFADFMRVCASRLPQRREAANHYLAHCR 167 (176)
T ss_pred hHHHHHHHHHhcccccccCHHHHHHHHH
Confidence 4677888899999999999999998764
No 96
>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D
Probab=59.31 E-value=7.5 Score=38.93 Aligned_cols=29 Identities=21% Similarity=0.344 Sum_probs=24.9
Q ss_pred HHHHHHHhhcCCCCCCCCCHHHHHHHhcc
Q 045568 305 KFIHIGLLCVQEDPADRPNMSSVAVMLAS 333 (379)
Q Consensus 305 ~~~~ial~Cv~~~p~~RPtM~~Vv~~L~~ 333 (379)
.+.++...|.+.+|.+||+|.++++.|+.
T Consensus 370 ~l~~li~~cl~~~P~~RPs~~ell~~L~~ 398 (401)
T cd05107 370 EIYEIMQKCWEEKFEIRPDFSQLVHLVGD 398 (401)
T ss_pred HHHHHHHHHcCCChhHCcCHHHHHHHHHH
Confidence 45566678999999999999999999975
No 97
>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc
Probab=58.89 E-value=9 Score=34.64 Aligned_cols=26 Identities=15% Similarity=0.267 Sum_probs=22.1
Q ss_pred HHHHHHHhhcCCCCCCCCCHHHHHHH
Q 045568 305 KFIHIGLLCVQEDPADRPNMSSVAVM 330 (379)
Q Consensus 305 ~~~~ial~Cv~~~p~~RPtM~~Vv~~ 330 (379)
.+..+...|++.+|++||+|.++++.
T Consensus 228 ~~~~~i~~~l~~~p~~Rp~~~~ll~~ 253 (256)
T cd08529 228 QLAQLIDQCLTKDYRQRPDTFQLLRN 253 (256)
T ss_pred HHHHHHHHHccCCcccCcCHHHHhhC
Confidence 46677789999999999999998753
No 98
>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase. Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions
Probab=58.60 E-value=7.9 Score=35.58 Aligned_cols=30 Identities=20% Similarity=0.392 Sum_probs=25.2
Q ss_pred HHHHHHHhhcCCCCCCCCCHHHHHHHhccC
Q 045568 305 KFIHIGLLCVQEDPADRPNMSSVAVMLASD 334 (379)
Q Consensus 305 ~~~~ial~Cv~~~p~~RPtM~~Vv~~L~~~ 334 (379)
.+..+...|+..+|.+||++.+++..|+..
T Consensus 236 ~~~~li~~~l~~~P~~Rpt~~~~~~~l~~~ 265 (270)
T cd05056 236 TLYSLMTKCWAYDPSKRPRFTELKAQLSDI 265 (270)
T ss_pred HHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence 345566789999999999999999998764
No 99
>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc
Probab=57.94 E-value=7.6 Score=35.91 Aligned_cols=25 Identities=16% Similarity=0.076 Sum_probs=21.5
Q ss_pred HHHHHHHhhcCCCCCCCCCHHHHHH
Q 045568 305 KFIHIGLLCVQEDPADRPNMSSVAV 329 (379)
Q Consensus 305 ~~~~ial~Cv~~~p~~RPtM~~Vv~ 329 (379)
.+..+...|++.+|.+||+|.+|+.
T Consensus 255 ~~~~li~~~l~~~P~~Rpt~~~il~ 279 (283)
T cd07835 255 DGLDLLSKMLVYDPAKRISAKAALQ 279 (283)
T ss_pred HHHHHHHHHhcCChhhCcCHHHHhc
Confidence 4567788999999999999999874
No 100
>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa. Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho
Probab=57.89 E-value=10 Score=34.75 Aligned_cols=29 Identities=21% Similarity=0.248 Sum_probs=24.9
Q ss_pred HHHHHHHhhcCCCCCCCCCHHHHHHHhcc
Q 045568 305 KFIHIGLLCVQEDPADRPNMSSVAVMLAS 333 (379)
Q Consensus 305 ~~~~ial~Cv~~~p~~RPtM~~Vv~~L~~ 333 (379)
.+.++-..|.+.+|++||+|.+|.+.|+.
T Consensus 226 ~l~~li~~c~~~~~~~Rp~~~~i~~~l~~ 254 (257)
T cd05115 226 EMYALMKDCWIYKWEDRPNFAKVEERMRT 254 (257)
T ss_pred HHHHHHHHHcCCChhhCcCHHHHHHHHhh
Confidence 44567788999999999999999999875
No 101
>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1. Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25
Probab=57.54 E-value=10 Score=34.96 Aligned_cols=26 Identities=23% Similarity=0.396 Sum_probs=22.1
Q ss_pred HHHHHHHhhcCCCCCCCCCHHHHHHH
Q 045568 305 KFIHIGLLCVQEDPADRPNMSSVAVM 330 (379)
Q Consensus 305 ~~~~ial~Cv~~~p~~RPtM~~Vv~~ 330 (379)
.+..+...|++.+|.+||+|.+|++.
T Consensus 228 ~~~~li~~~l~~~p~~Rp~~~~il~~ 253 (277)
T cd06642 228 PFKEFVEACLNKDPRFRPTAKELLKH 253 (277)
T ss_pred HHHHHHHHHccCCcccCcCHHHHHHh
Confidence 45567788999999999999999873
No 102
>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti
Probab=57.17 E-value=8.9 Score=34.79 Aligned_cols=25 Identities=20% Similarity=0.393 Sum_probs=21.0
Q ss_pred HHHHHHHhhcCCCCCCCCCHHHHHH
Q 045568 305 KFIHIGLLCVQEDPADRPNMSSVAV 329 (379)
Q Consensus 305 ~~~~ial~Cv~~~p~~RPtM~~Vv~ 329 (379)
.+..+...|++.+|.+||+|.+|++
T Consensus 228 ~~~~li~~~l~~~p~~Rp~~~~vl~ 252 (256)
T cd08218 228 DLRNLVSQLFKRNPRDRPSVNSILE 252 (256)
T ss_pred HHHHHHHHHhhCChhhCcCHHHHhh
Confidence 3555667899999999999999986
No 103
>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI
Probab=56.49 E-value=9.1 Score=35.38 Aligned_cols=25 Identities=28% Similarity=0.566 Sum_probs=21.5
Q ss_pred HHHHHHHhhcCCCCCCCCCHHHHHH
Q 045568 305 KFIHIGLLCVQEDPADRPNMSSVAV 329 (379)
Q Consensus 305 ~~~~ial~Cv~~~p~~RPtM~~Vv~ 329 (379)
.+..+...|.+.+|.+||+|.++++
T Consensus 258 ~~~~li~~~l~~~P~~Rp~~~~il~ 282 (286)
T cd07846 258 LVLDLAKQCLRIDPDDRPSSSQLLH 282 (286)
T ss_pred HHHHHHHHHhcCCcccchhHHHHhc
Confidence 4667788999999999999998864
No 104
>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=54.61 E-value=9.4 Score=35.48 Aligned_cols=27 Identities=22% Similarity=0.454 Sum_probs=22.8
Q ss_pred HHHHHHHhhcCCCCCCCCCHHHHHHHh
Q 045568 305 KFIHIGLLCVQEDPADRPNMSSVAVML 331 (379)
Q Consensus 305 ~~~~ial~Cv~~~p~~RPtM~~Vv~~L 331 (379)
.+..+...|++.+|.+||++.+|+++.
T Consensus 241 ~~~~li~~~l~~dp~~Rpt~~e~~~~~ 267 (284)
T cd06620 241 DLRDFVDACLLKDPTERPTPQQLCAMP 267 (284)
T ss_pred HHHHHHHHHhcCCcccCcCHHHHhcCc
Confidence 355666789999999999999999874
No 105
>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2. Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve
Probab=53.56 E-value=13 Score=34.34 Aligned_cols=30 Identities=17% Similarity=0.191 Sum_probs=25.6
Q ss_pred HHHHHHHhhcCCCCCCCCCHHHHHHHhccC
Q 045568 305 KFIHIGLLCVQEDPADRPNMSSVAVMLASD 334 (379)
Q Consensus 305 ~~~~ial~Cv~~~p~~RPtM~~Vv~~L~~~ 334 (379)
.+..+...|.+.+|.+||++.+++..|+..
T Consensus 239 ~~~~li~~~l~~dp~~Rp~~~~l~~~l~~~ 268 (279)
T cd05109 239 DVYMIMVKCWMIDSECRPRFRELVDEFSRM 268 (279)
T ss_pred HHHHHHHHHcCCChhhCcCHHHHHHHHHHh
Confidence 455677789999999999999999988754
No 106
>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=52.88 E-value=14 Score=34.49 Aligned_cols=26 Identities=23% Similarity=0.423 Sum_probs=22.3
Q ss_pred HHHHHHHhhcCCCCCCCCCHHHHHHH
Q 045568 305 KFIHIGLLCVQEDPADRPNMSSVAVM 330 (379)
Q Consensus 305 ~~~~ial~Cv~~~p~~RPtM~~Vv~~ 330 (379)
.+..+-..|++.+|.+||+|.+|++.
T Consensus 241 ~~~~li~~~l~~~p~~Rpt~~eil~~ 266 (287)
T cd06621 241 EFKDFIKQCLEKDPTRRPTPWDMLEH 266 (287)
T ss_pred HHHHHHHHHcCCCcccCCCHHHHHhC
Confidence 45677889999999999999998863
No 107
>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.
Probab=52.01 E-value=13 Score=33.63 Aligned_cols=25 Identities=16% Similarity=0.295 Sum_probs=21.6
Q ss_pred HHHHHHHhhcCCCCCCCCCHHHHHH
Q 045568 305 KFIHIGLLCVQEDPADRPNMSSVAV 329 (379)
Q Consensus 305 ~~~~ial~Cv~~~p~~RPtM~~Vv~ 329 (379)
.+..+...|++.+|.+||+|.++++
T Consensus 229 ~~~~li~~~l~~~p~~Rp~~~~~l~ 253 (257)
T cd08223 229 ELGELIATMLSKRPEKRPSVKSILR 253 (257)
T ss_pred HHHHHHHHHhccCcccCCCHHHHhc
Confidence 4667788999999999999999875
No 108
>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po
Probab=51.45 E-value=13 Score=34.11 Aligned_cols=26 Identities=12% Similarity=0.019 Sum_probs=22.5
Q ss_pred HHHHHHHHhhcCCCCCCCCCHHHHHH
Q 045568 304 LKFIHIGLLCVQEDPADRPNMSSVAV 329 (379)
Q Consensus 304 ~~~~~ial~Cv~~~p~~RPtM~~Vv~ 329 (379)
..++++...|++.+|.+||++.++++
T Consensus 258 ~~~~~~i~~~l~~~P~~Rp~~~~~l~ 283 (287)
T cd07840 258 PSALDLLDKLLTLDPKKRISADQALQ 283 (287)
T ss_pred HHHHHHHHHHcCCChhhCcCHHHHhh
Confidence 35678888999999999999998875
No 109
>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili
Probab=51.34 E-value=14 Score=34.12 Aligned_cols=26 Identities=23% Similarity=0.202 Sum_probs=22.3
Q ss_pred HHHHHHHHhhcCCCCCCCCCHHHHHH
Q 045568 304 LKFIHIGLLCVQEDPADRPNMSSVAV 329 (379)
Q Consensus 304 ~~~~~ial~Cv~~~p~~RPtM~~Vv~ 329 (379)
..+..+...|++.+|.+||++.+++.
T Consensus 254 ~~~~~li~~cl~~~p~~Rpt~~ei~~ 279 (283)
T cd07830 254 PEAIDLIKDMLRWDPKKRPTASQALQ 279 (283)
T ss_pred HHHHHHHHHhcccCcccCCCHHHHhh
Confidence 34677888999999999999998875
No 110
>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with
Probab=51.31 E-value=12 Score=33.68 Aligned_cols=25 Identities=24% Similarity=0.466 Sum_probs=21.1
Q ss_pred HHHHHHHhhcCCCCCCCCCHHHHHH
Q 045568 305 KFIHIGLLCVQEDPADRPNMSSVAV 329 (379)
Q Consensus 305 ~~~~ial~Cv~~~p~~RPtM~~Vv~ 329 (379)
.+..+-..|++.+|.+||++.+++.
T Consensus 228 ~l~~li~~~l~~~p~~Rpt~~~ll~ 252 (256)
T cd08220 228 DLRQLILSMLNLDPSKRPQLSQIMA 252 (256)
T ss_pred HHHHHHHHHccCChhhCCCHHHHhh
Confidence 3556678899999999999999875
No 111
>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage
Probab=51.02 E-value=15 Score=33.80 Aligned_cols=21 Identities=24% Similarity=0.450 Sum_probs=17.3
Q ss_pred HhhcCCCCCCCCCHHHHHHHhc
Q 045568 311 LLCVQEDPADRPNMSSVAVMLA 332 (379)
Q Consensus 311 l~Cv~~~p~~RPtM~~Vv~~L~ 332 (379)
..|. .+|.+||++.+|+++|.
T Consensus 247 ~~c~-~~P~~Rp~~~~i~~~l~ 267 (268)
T cd05086 247 QFCW-LSPEKRATAEEVHRLLT 267 (268)
T ss_pred HHHh-hCcccCCCHHHHHHHhc
Confidence 4576 46999999999999874
No 112
>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase. Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina
Probab=50.94 E-value=15 Score=33.70 Aligned_cols=25 Identities=20% Similarity=0.351 Sum_probs=20.9
Q ss_pred HHHHHHHhhcCCCCCCCCCHHHHHH
Q 045568 305 KFIHIGLLCVQEDPADRPNMSSVAV 329 (379)
Q Consensus 305 ~~~~ial~Cv~~~p~~RPtM~~Vv~ 329 (379)
.+..+...|++.+|.+||++.+++.
T Consensus 240 ~~~~li~~~l~~~p~~Rpt~~~ll~ 264 (268)
T cd06624 240 EAKNFILRCFEPDPDKRASAHDLLQ 264 (268)
T ss_pred HHHHHHHHHcCCCchhCCCHHHHHh
Confidence 3556678999999999999999875
No 113
>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning
Probab=50.50 E-value=11 Score=34.75 Aligned_cols=25 Identities=16% Similarity=0.305 Sum_probs=21.4
Q ss_pred HHHHHHHhhcCCCCCCCCCHHHHHH
Q 045568 305 KFIHIGLLCVQEDPADRPNMSSVAV 329 (379)
Q Consensus 305 ~~~~ial~Cv~~~p~~RPtM~~Vv~ 329 (379)
.+..+...|++.+|.+||+|.++++
T Consensus 260 ~~~~li~~~l~~~p~~Rps~~~il~ 284 (288)
T cd07833 260 PALDFLKACLRMDPKERLTCDELLQ 284 (288)
T ss_pred HHHHHHHHHhccCchhcccHHHHhc
Confidence 4667778899999999999998875
No 114
>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a
Probab=50.39 E-value=12 Score=33.79 Aligned_cols=24 Identities=25% Similarity=0.502 Sum_probs=20.1
Q ss_pred HHHHHHhhcCCCCCCCCCHHHHHH
Q 045568 306 FIHIGLLCVQEDPADRPNMSSVAV 329 (379)
Q Consensus 306 ~~~ial~Cv~~~p~~RPtM~~Vv~ 329 (379)
+.++-..|.+.+|.+||++.+|+.
T Consensus 229 ~~~~i~~~l~~~P~~Rps~~~il~ 252 (256)
T cd06612 229 FNDFVKKCLVKDPEERPSAIQLLQ 252 (256)
T ss_pred HHHHHHHHHhcChhhCcCHHHHhc
Confidence 455666899999999999999875
No 115
>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is
Probab=49.93 E-value=21 Score=33.20 Aligned_cols=26 Identities=8% Similarity=0.017 Sum_probs=22.5
Q ss_pred HHHHHHHhhcCCCCCCCCCHHHHHHH
Q 045568 305 KFIHIGLLCVQEDPADRPNMSSVAVM 330 (379)
Q Consensus 305 ~~~~ial~Cv~~~p~~RPtM~~Vv~~ 330 (379)
.+.++...|++.+|.+||++.+|+..
T Consensus 257 ~~~~li~~~l~~~P~~R~s~~e~l~~ 282 (298)
T cd07841 257 DALDLLQRLLTLNPNKRITARQALEH 282 (298)
T ss_pred HHHHHHHHHhcCCcccCcCHHHHhhC
Confidence 45677788999999999999999875
No 116
>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin. Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear
Probab=49.82 E-value=16 Score=33.73 Aligned_cols=25 Identities=24% Similarity=0.378 Sum_probs=21.2
Q ss_pred HHHHHHhhcCCCCCCCCCHHHHHHH
Q 045568 306 FIHIGLLCVQEDPADRPNMSSVAVM 330 (379)
Q Consensus 306 ~~~ial~Cv~~~p~~RPtM~~Vv~~ 330 (379)
+..+-..|.+.+|.+||++.++++-
T Consensus 259 ~~~li~~~l~~~p~~Rps~~ell~~ 283 (286)
T cd06638 259 FNDFIRKCLTKDYEKRPTVSDLLQH 283 (286)
T ss_pred HHHHHHHHccCCcccCCCHHHHhhc
Confidence 5566678999999999999999864
No 117
>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK
Probab=49.63 E-value=15 Score=32.78 Aligned_cols=25 Identities=20% Similarity=0.388 Sum_probs=20.6
Q ss_pred HHHHHHHhhcCCCCCCCCCHHHHHH
Q 045568 305 KFIHIGLLCVQEDPADRPNMSSVAV 329 (379)
Q Consensus 305 ~~~~ial~Cv~~~p~~RPtM~~Vv~ 329 (379)
.+.++..+|++.+|.+||++.+++.
T Consensus 232 ~l~~~i~~~l~~~p~~Rp~~~~ll~ 256 (260)
T cd06606 232 EAKDFLRKCLRRDPKKRPTADELLQ 256 (260)
T ss_pred HHHHHHHHhCcCChhhCCCHHHHhh
Confidence 3455667899999999999999875
No 118
>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They
Probab=48.53 E-value=17 Score=33.41 Aligned_cols=25 Identities=12% Similarity=0.133 Sum_probs=21.8
Q ss_pred HHHHHHHhhcCCCCCCCCCHHHHHH
Q 045568 305 KFIHIGLLCVQEDPADRPNMSSVAV 329 (379)
Q Consensus 305 ~~~~ial~Cv~~~p~~RPtM~~Vv~ 329 (379)
.+..+...|++.+|.+||+|.+++.
T Consensus 255 ~~~~~i~~~l~~~P~~Rp~~~~ll~ 279 (283)
T cd05118 255 QALDLLSQMLHYDPHKRITAEQALA 279 (283)
T ss_pred HHHHHHHHHhccCcccCcCHHHHhh
Confidence 5667788999999999999999875
No 119
>cd00180 PKc Catalytic domain of Protein Kinases. Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which
Probab=48.06 E-value=16 Score=31.12 Aligned_cols=27 Identities=19% Similarity=0.277 Sum_probs=23.9
Q ss_pred HHHHHHHHhhcCCCCCCCCCHHHHHHH
Q 045568 304 LKFIHIGLLCVQEDPADRPNMSSVAVM 330 (379)
Q Consensus 304 ~~~~~ial~Cv~~~p~~RPtM~~Vv~~ 330 (379)
..+.++...|++.+|.+||++.++++.
T Consensus 188 ~~~~~~l~~~l~~~p~~R~~~~~l~~~ 214 (215)
T cd00180 188 PELKDLIRKMLQKDPEKRPSAKEILEH 214 (215)
T ss_pred HHHHHHHHHHhhCCcccCcCHHHHhhC
Confidence 678888899999999999999998764
No 120
>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.
Probab=47.28 E-value=16 Score=33.05 Aligned_cols=24 Identities=21% Similarity=0.335 Sum_probs=19.6
Q ss_pred HHHHHHhhcCCCCCCCCCHHHHHH
Q 045568 306 FIHIGLLCVQEDPADRPNMSSVAV 329 (379)
Q Consensus 306 ~~~ial~Cv~~~p~~RPtM~~Vv~ 329 (379)
+..+-..|.+.+|.+||++.++++
T Consensus 230 ~~~~i~~~l~~~p~~Rpt~~~ll~ 253 (257)
T cd08225 230 LRSLISQLFKVSPRDRPSITSILK 253 (257)
T ss_pred HHHHHHHHhccChhhCcCHHHHhh
Confidence 445556789999999999999875
No 121
>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]
Probab=47.07 E-value=22 Score=33.49 Aligned_cols=29 Identities=21% Similarity=0.319 Sum_probs=23.8
Q ss_pred HHHHHHHhhcCCCCCCCCCHHHHHHHhcc
Q 045568 305 KFIHIGLLCVQEDPADRPNMSSVAVMLAS 333 (379)
Q Consensus 305 ~~~~ial~Cv~~~p~~RPtM~~Vv~~L~~ 333 (379)
.+.++--+|+|.+|.+||++.+++..++.
T Consensus 271 ~l~~lik~mlqvdP~qRP~i~~ll~~~d~ 299 (302)
T KOG2345|consen 271 ALHQLIKSMLQVDPNQRPTIPELLSKLDD 299 (302)
T ss_pred HHHHHHHHHhcCCcccCCCHHHHHHHHHh
Confidence 34555668999999999999999988764
No 122
>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells
Probab=45.25 E-value=21 Score=32.78 Aligned_cols=21 Identities=29% Similarity=0.653 Sum_probs=17.3
Q ss_pred HhhcCCCCCCCCCHHHHHHHhc
Q 045568 311 LLCVQEDPADRPNMSSVAVMLA 332 (379)
Q Consensus 311 l~Cv~~~p~~RPtM~~Vv~~L~ 332 (379)
-.|. .+|.+||++.+|++.|.
T Consensus 248 ~~c~-~~P~~Rpt~~~l~~~l~ 268 (269)
T cd05087 248 QFCW-LQPEQRPSAEEVHLLLS 268 (269)
T ss_pred HHHh-cCcccCCCHHHHHHHhc
Confidence 3565 47999999999999875
No 123
>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase. Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.
Probab=45.19 E-value=19 Score=33.09 Aligned_cols=26 Identities=12% Similarity=0.046 Sum_probs=21.7
Q ss_pred HHHHHHHHhhcCCCCCCCCCHHHHHH
Q 045568 304 LKFIHIGLLCVQEDPADRPNMSSVAV 329 (379)
Q Consensus 304 ~~~~~ial~Cv~~~p~~RPtM~~Vv~ 329 (379)
..+.++...|++.+|.+||++.+++.
T Consensus 253 ~~~~~li~~~l~~~P~~R~~~~~~l~ 278 (282)
T cd07831 253 AEGLDLLKKLLAYDPDERITAKQALR 278 (282)
T ss_pred HHHHHHHHHHhccCcccccCHHHHhh
Confidence 34566778899999999999998864
No 124
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter
Probab=45.17 E-value=20 Score=33.08 Aligned_cols=27 Identities=22% Similarity=0.347 Sum_probs=22.6
Q ss_pred HHHHHHHHhhcCCCCCCCCCHHHHHHH
Q 045568 304 LKFIHIGLLCVQEDPADRPNMSSVAVM 330 (379)
Q Consensus 304 ~~~~~ial~Cv~~~p~~RPtM~~Vv~~ 330 (379)
..+..+...|.+.+|.+||++.+++..
T Consensus 227 ~~~~~li~~~l~~~p~~Rp~~~~il~~ 253 (277)
T cd06640 227 KPFKEFIDACLNKDPSFRPTAKELLKH 253 (277)
T ss_pred HHHHHHHHHHcccCcccCcCHHHHHhC
Confidence 446677789999999999999999654
No 125
>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I
Probab=45.15 E-value=17 Score=33.08 Aligned_cols=25 Identities=24% Similarity=0.329 Sum_probs=21.0
Q ss_pred HHHHHHHhhcCCCCCCCCCHHHHHH
Q 045568 305 KFIHIGLLCVQEDPADRPNMSSVAV 329 (379)
Q Consensus 305 ~~~~ial~Cv~~~p~~RPtM~~Vv~ 329 (379)
.+..+-.+|+..+|.+||++.++++
T Consensus 247 ~~~~li~~~l~~dp~~Rpt~~~ll~ 271 (275)
T cd06608 247 KFNDFISECLIKNYEQRPFMEELLE 271 (275)
T ss_pred HHHHHHHHHhhcChhhCcCHHHHhc
Confidence 4556677899999999999999875
No 126
>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases. Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core
Probab=44.59 E-value=17 Score=32.32 Aligned_cols=25 Identities=24% Similarity=0.505 Sum_probs=20.5
Q ss_pred HHHHHHHhhcCCCCCCCCCHHHHHH
Q 045568 305 KFIHIGLLCVQEDPADRPNMSSVAV 329 (379)
Q Consensus 305 ~~~~ial~Cv~~~p~~RPtM~~Vv~ 329 (379)
.+..+...|++.+|.+||++.++++
T Consensus 226 ~~~~~i~~~l~~~p~~R~t~~~~l~ 250 (253)
T cd05122 226 EFKDFLKKCLQKNPEKRPTAEQLLK 250 (253)
T ss_pred HHHHHHHHHccCChhhCCCHHHHhc
Confidence 3555667899999999999998864
No 127
>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the
Probab=44.03 E-value=19 Score=33.82 Aligned_cols=25 Identities=12% Similarity=0.053 Sum_probs=21.7
Q ss_pred HHHHHHHhhcCCCCCCCCCHHHHHH
Q 045568 305 KFIHIGLLCVQEDPADRPNMSSVAV 329 (379)
Q Consensus 305 ~~~~ial~Cv~~~p~~RPtM~~Vv~ 329 (379)
.+..+...|++.+|.+||++.+++.
T Consensus 288 ~~~~~i~~~l~~~P~~Rps~~eil~ 312 (316)
T cd07842 288 QGFDLLRKLLEYDPTKRITAEEALE 312 (316)
T ss_pred HHHHHHHHHhcCCcccCcCHHHHhc
Confidence 4677888999999999999998874
No 128
>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase. Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ
Probab=43.58 E-value=21 Score=32.65 Aligned_cols=25 Identities=20% Similarity=0.372 Sum_probs=20.5
Q ss_pred HHHHHHHhhcCCCCCCCCCHHHHHH
Q 045568 305 KFIHIGLLCVQEDPADRPNMSSVAV 329 (379)
Q Consensus 305 ~~~~ial~Cv~~~p~~RPtM~~Vv~ 329 (379)
.+..+-..|.+.+|.+||++.+|++
T Consensus 244 ~~~~li~~~l~~~p~~Rpt~~~il~ 268 (272)
T cd06637 244 KFQSFIESCLVKNHSQRPTTEQLMK 268 (272)
T ss_pred HHHHHHHHHcCCChhhCCCHHHHhh
Confidence 3456667999999999999998864
No 129
>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio
Probab=43.47 E-value=20 Score=33.02 Aligned_cols=25 Identities=20% Similarity=0.280 Sum_probs=21.0
Q ss_pred HHHHHHHhhcCCCCCCCCCHHHHHH
Q 045568 305 KFIHIGLLCVQEDPADRPNMSSVAV 329 (379)
Q Consensus 305 ~~~~ial~Cv~~~p~~RPtM~~Vv~ 329 (379)
.+..+...|.+.+|.+||++.+++.
T Consensus 258 ~~~~li~~~l~~~p~~Rp~~~eil~ 282 (286)
T cd07847 258 PALSFLKGCLQMDPTERLSCEELLE 282 (286)
T ss_pred HHHHHHHHHhcCCccccCCHHHHhc
Confidence 3566778899999999999998764
No 130
>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity. Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....
Probab=43.45 E-value=17 Score=32.85 Aligned_cols=26 Identities=15% Similarity=0.255 Sum_probs=22.1
Q ss_pred HHHHHHHHhhcCCCCCCCCCHHHHHH
Q 045568 304 LKFIHIGLLCVQEDPADRPNMSSVAV 329 (379)
Q Consensus 304 ~~~~~ial~Cv~~~p~~RPtM~~Vv~ 329 (379)
..+.++-..|++.+|.+||+|.++++
T Consensus 231 ~~l~~li~~~l~~~p~~R~~~~~l~~ 256 (260)
T PF00069_consen 231 EELRDLIKKMLSKDPEQRPSAEELLK 256 (260)
T ss_dssp HHHHHHHHHHSSSSGGGSTTHHHHHT
T ss_pred HHHHHHHHHHccCChhHCcCHHHHhc
Confidence 45667778899999999999999875
No 131
>PF07172 GRP: Glycine rich protein family; InterPro: IPR010800 This family consists of glycine rich proteins. Some of them may be involved in resistance to environmental stress [].
Probab=43.25 E-value=17 Score=28.85 Aligned_cols=18 Identities=22% Similarity=0.264 Sum_probs=7.5
Q ss_pred CchHHHHHHHHHHHHHHh
Q 045568 1 MNMNIILVFLSVLSFLIS 18 (379)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~ 18 (379)
|..=++|||.++|..+|+
T Consensus 1 MaSK~~llL~l~LA~lLl 18 (95)
T PF07172_consen 1 MASKAFLLLGLLLAALLL 18 (95)
T ss_pred CchhHHHHHHHHHHHHHH
Confidence 554443444344433333
No 132
>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)
Probab=43.20 E-value=20 Score=32.86 Aligned_cols=25 Identities=28% Similarity=0.602 Sum_probs=20.6
Q ss_pred HHHHHHhhcCCCCCCCCCHHHHHHH
Q 045568 306 FIHIGLLCVQEDPADRPNMSSVAVM 330 (379)
Q Consensus 306 ~~~ial~Cv~~~p~~RPtM~~Vv~~ 330 (379)
+..+...|++.+|.+||++.+++..
T Consensus 227 ~~~~l~~~l~~~p~~Rpt~~~il~~ 251 (274)
T cd06609 227 FKDFVSLCLNKDPKERPSAKELLKH 251 (274)
T ss_pred HHHHHHHHhhCChhhCcCHHHHhhC
Confidence 4456678999999999999999763
No 133
>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte
Probab=42.93 E-value=20 Score=32.75 Aligned_cols=25 Identities=16% Similarity=0.313 Sum_probs=20.4
Q ss_pred HHHHHHHhhcCCCCCCCCCHHHHHH
Q 045568 305 KFIHIGLLCVQEDPADRPNMSSVAV 329 (379)
Q Consensus 305 ~~~~ial~Cv~~~p~~RPtM~~Vv~ 329 (379)
.+..+-..|++.+|.+||+|.+|++
T Consensus 244 ~~~~li~~~l~~~p~~Rps~~~il~ 268 (272)
T cd06629 244 VALDFLNACFTINPDNRPTARELLQ 268 (272)
T ss_pred HHHHHHHHHhcCChhhCCCHHHHhh
Confidence 3455567899999999999999875
No 134
>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int
Probab=42.66 E-value=23 Score=32.71 Aligned_cols=26 Identities=15% Similarity=0.328 Sum_probs=21.9
Q ss_pred HHHHHHHhhcCCCCCCCCCHHHHHHH
Q 045568 305 KFIHIGLLCVQEDPADRPNMSSVAVM 330 (379)
Q Consensus 305 ~~~~ial~Cv~~~p~~RPtM~~Vv~~ 330 (379)
.+..+...|.+.+|.+||+|.+++..
T Consensus 228 ~~~~~i~~~l~~~p~~Rp~~~~~l~~ 253 (277)
T cd06641 228 PLKEFVEACLNKEPSFRPTAKELLKH 253 (277)
T ss_pred HHHHHHHHHccCChhhCcCHHHHHhC
Confidence 34566788999999999999999874
No 135
>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase. Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down
Probab=42.56 E-value=18 Score=34.10 Aligned_cols=25 Identities=16% Similarity=0.466 Sum_probs=21.6
Q ss_pred HHHHHHhhcCCCCCCCCCHHHHHHH
Q 045568 306 FIHIGLLCVQEDPADRPNMSSVAVM 330 (379)
Q Consensus 306 ~~~ial~Cv~~~p~~RPtM~~Vv~~ 330 (379)
+.++..+|++.+|.+||++.+|+..
T Consensus 263 ~~~li~~~l~~~P~~Rpt~~~ll~~ 287 (308)
T cd06615 263 FQDFVDKCLKKNPKERADLKELTKH 287 (308)
T ss_pred HHHHHHHHccCChhhCcCHHHHhcC
Confidence 5567788999999999999998765
No 136
>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa
Probab=42.54 E-value=22 Score=32.16 Aligned_cols=27 Identities=26% Similarity=0.357 Sum_probs=21.9
Q ss_pred HHHHHHHhhcCCCCCCCCCHHHHHHHh
Q 045568 305 KFIHIGLLCVQEDPADRPNMSSVAVML 331 (379)
Q Consensus 305 ~~~~ial~Cv~~~p~~RPtM~~Vv~~L 331 (379)
.+..+...|++.+|.+||++.++++.+
T Consensus 228 ~~~~~i~~~l~~~p~~R~s~~~ll~~~ 254 (256)
T cd08221 228 ELISLVHSLLQQDPEKRPTADEVLDQP 254 (256)
T ss_pred HHHHHHHHHcccCcccCCCHHHHhhCc
Confidence 355566789999999999999998753
No 137
>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin. Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre
Probab=42.48 E-value=19 Score=33.51 Aligned_cols=25 Identities=24% Similarity=0.416 Sum_probs=21.5
Q ss_pred HHHHHHHhhcCCCCCCCCCHHHHHH
Q 045568 305 KFIHIGLLCVQEDPADRPNMSSVAV 329 (379)
Q Consensus 305 ~~~~ial~Cv~~~p~~RPtM~~Vv~ 329 (379)
.+..+...|.+.+|++||+|.+++.
T Consensus 262 ~l~~li~~~l~~~p~~Rps~~~il~ 286 (291)
T cd06639 262 SFNHFISQCLIKDFEARPSVTHLLE 286 (291)
T ss_pred HHHHHHHHHhhcChhhCcCHHHHhc
Confidence 4667778999999999999998864
No 138
>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex
Probab=42.05 E-value=22 Score=32.83 Aligned_cols=23 Identities=13% Similarity=0.105 Sum_probs=19.4
Q ss_pred HHHHHhhcCCCCCCCCCHHHHHH
Q 045568 307 IHIGLLCVQEDPADRPNMSSVAV 329 (379)
Q Consensus 307 ~~ial~Cv~~~p~~RPtM~~Vv~ 329 (379)
..+-..|.+.+|.+||+|.+++.
T Consensus 258 ~~li~~~l~~~P~~Rpt~~~~l~ 280 (284)
T cd07860 258 RDLLSQMLHYDPNKRISAKAALA 280 (284)
T ss_pred HHHHHHhcCCCcccCCCHHHHhc
Confidence 45667899999999999998874
No 139
>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta. Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig
Probab=42.02 E-value=29 Score=33.11 Aligned_cols=27 Identities=37% Similarity=0.608 Sum_probs=22.9
Q ss_pred HHHHHHHHHhhcCCCCCCCCCHHHHHH
Q 045568 303 LLKFIHIGLLCVQEDPADRPNMSSVAV 329 (379)
Q Consensus 303 l~~~~~ial~Cv~~~p~~RPtM~~Vv~ 329 (379)
-..+..+...|.+.+|.+||++.++++
T Consensus 281 ~~~~~~li~~~l~~dP~~Rpta~e~l~ 307 (328)
T cd08226 281 SPAFQNLVELCLQQDPEKRPSASSLLS 307 (328)
T ss_pred hHHHHHHHHHHccCCcccCCCHHHHhh
Confidence 345677888999999999999999974
No 140
>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5. Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p
Probab=41.44 E-value=19 Score=33.29 Aligned_cols=25 Identities=24% Similarity=0.586 Sum_probs=20.7
Q ss_pred HHHHHHhhcCCCCCCCCCHHHHHHH
Q 045568 306 FIHIGLLCVQEDPADRPNMSSVAVM 330 (379)
Q Consensus 306 ~~~ial~Cv~~~p~~RPtM~~Vv~~ 330 (379)
+.++...|.+.+|.+||++.+++..
T Consensus 229 ~~~li~~~l~~~P~~Rp~~~eil~~ 253 (279)
T cd06619 229 FVHFITQCMRKQPKERPAPENLMDH 253 (279)
T ss_pred HHHHHHHHhhCChhhCCCHHHHhcC
Confidence 4566678999999999999998754
No 141
>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2
Probab=41.38 E-value=20 Score=33.08 Aligned_cols=23 Identities=17% Similarity=0.109 Sum_probs=19.1
Q ss_pred HHHHHhhcCCCCCCCCCHHHHHH
Q 045568 307 IHIGLLCVQEDPADRPNMSSVAV 329 (379)
Q Consensus 307 ~~ial~Cv~~~p~~RPtM~~Vv~ 329 (379)
.++-..|++.+|.+||++.+|+.
T Consensus 259 ~~li~~~l~~dP~~Rpt~~~ll~ 281 (285)
T cd07861 259 LDLLEKMLIYDPAKRISAKKALN 281 (285)
T ss_pred HHHHHHHhcCChhhCCCHHHHhc
Confidence 45666899999999999998864
No 142
>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=41.10 E-value=19 Score=32.86 Aligned_cols=26 Identities=19% Similarity=0.422 Sum_probs=20.9
Q ss_pred HHHHHHhhcCCCCCCCCCHHHHHHHh
Q 045568 306 FIHIGLLCVQEDPADRPNMSSVAVML 331 (379)
Q Consensus 306 ~~~ial~Cv~~~p~~RPtM~~Vv~~L 331 (379)
+.++...|.+.+|++||++.++++.|
T Consensus 241 ~~~li~~~l~~~P~~Rp~~~~il~~l 266 (267)
T cd06646 241 FHNFVKISLTKNPKKRPTAERLLTHL 266 (267)
T ss_pred HHHHHHHHhhCChhhCcCHHHHhcCC
Confidence 44556689999999999999987643
No 143
>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both
Probab=40.17 E-value=26 Score=32.17 Aligned_cols=25 Identities=8% Similarity=-0.037 Sum_probs=20.8
Q ss_pred HHHHHHHhhcCCCCCCCCCHHHHHH
Q 045568 305 KFIHIGLLCVQEDPADRPNMSSVAV 329 (379)
Q Consensus 305 ~~~~ial~Cv~~~p~~RPtM~~Vv~ 329 (379)
.+..+...|++.+|.+||++.+++.
T Consensus 259 ~~~~li~~~l~~dp~~Rp~~~~il~ 283 (287)
T cd07838 259 EGLDLLKKMLTFNPHKRISAFEALQ 283 (287)
T ss_pred HHHHHHHHHhccCCccCCCHHHHhc
Confidence 4456778899999999999998863
No 144
>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati
Probab=40.15 E-value=24 Score=31.89 Aligned_cols=25 Identities=12% Similarity=0.262 Sum_probs=20.3
Q ss_pred HHHHHHhhcCCCCCCCCCHHHHHHH
Q 045568 306 FIHIGLLCVQEDPADRPNMSSVAVM 330 (379)
Q Consensus 306 ~~~ial~Cv~~~p~~RPtM~~Vv~~ 330 (379)
+..+-..|++.+|.+||++.+++..
T Consensus 228 ~~~li~~~l~~~P~~Rp~~~~il~~ 252 (255)
T cd08219 228 LRSLIKQMFKRNPRSRPSATTILSR 252 (255)
T ss_pred HHHHHHHHHhCCcccCCCHHHHhhc
Confidence 3455568999999999999998764
No 145
>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase. Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1
Probab=40.14 E-value=25 Score=31.80 Aligned_cols=25 Identities=32% Similarity=0.636 Sum_probs=20.6
Q ss_pred HHHHHHHhhcCCCCCCCCCHHHHHH
Q 045568 305 KFIHIGLLCVQEDPADRPNMSSVAV 329 (379)
Q Consensus 305 ~~~~ial~Cv~~~p~~RPtM~~Vv~ 329 (379)
.+..+-..|++.+|.+||++.++++
T Consensus 239 ~~~~li~~~l~~~p~~Rp~~~~ll~ 263 (267)
T cd06610 239 SFRKMISLCLQKDPSKRPTAEELLK 263 (267)
T ss_pred HHHHHHHHHcCCChhhCcCHHHHhh
Confidence 3456667899999999999998875
No 146
>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4
Probab=40.02 E-value=25 Score=31.76 Aligned_cols=24 Identities=25% Similarity=0.344 Sum_probs=19.5
Q ss_pred HHHHHHhhcCCCCCCCCCHHHHHH
Q 045568 306 FIHIGLLCVQEDPADRPNMSSVAV 329 (379)
Q Consensus 306 ~~~ial~Cv~~~p~~RPtM~~Vv~ 329 (379)
+..+-..|++.+|.+||++.+++.
T Consensus 237 ~~~li~~~l~~~p~~R~~~~~i~~ 260 (264)
T cd06626 237 GKDFLDRCLESDPKKRPTASELLQ 260 (264)
T ss_pred HHHHHHHHccCCcccCCCHHHHhc
Confidence 345567899999999999998763
No 147
>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops
Probab=39.96 E-value=23 Score=31.82 Aligned_cols=24 Identities=29% Similarity=0.450 Sum_probs=19.5
Q ss_pred HHHHHHhhcCCCCCCCCCHHHHHH
Q 045568 306 FIHIGLLCVQEDPADRPNMSSVAV 329 (379)
Q Consensus 306 ~~~ial~Cv~~~p~~RPtM~~Vv~ 329 (379)
+..+-..|++.+|.+||++.+++.
T Consensus 231 ~~~li~~~l~~~p~~Rp~~~~~l~ 254 (258)
T cd06632 231 AKDFILKCLQRDPSLRPTAAELLE 254 (258)
T ss_pred HHHHHHHHhhcCcccCcCHHHHhc
Confidence 344556899999999999999874
No 148
>PLN00009 cyclin-dependent kinase A; Provisional
Probab=39.63 E-value=23 Score=32.88 Aligned_cols=24 Identities=13% Similarity=0.083 Sum_probs=20.7
Q ss_pred HHHHHHhhcCCCCCCCCCHHHHHH
Q 045568 306 FIHIGLLCVQEDPADRPNMSSVAV 329 (379)
Q Consensus 306 ~~~ial~Cv~~~p~~RPtM~~Vv~ 329 (379)
+.++...|++.+|++||+|.++++
T Consensus 260 ~~~~i~~~l~~~P~~Rps~~~~l~ 283 (294)
T PLN00009 260 GVDLLSKMLRLDPSKRITARAALE 283 (294)
T ss_pred HHHHHHHHccCChhhCcCHHHHhc
Confidence 456777899999999999999885
No 149
>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein. Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc
Probab=39.45 E-value=24 Score=33.11 Aligned_cols=26 Identities=35% Similarity=0.599 Sum_probs=21.7
Q ss_pred HHHHHHHhhcCCCCCCCCCHHHHHHH
Q 045568 305 KFIHIGLLCVQEDPADRPNMSSVAVM 330 (379)
Q Consensus 305 ~~~~ial~Cv~~~p~~RPtM~~Vv~~ 330 (379)
.+..+...|.+.+|.+||++.++++.
T Consensus 270 ~~~~li~~~l~~~P~~Rpt~~~ll~~ 295 (314)
T cd08216 270 HFHQFVELCLQRDPESRPSASQLLNH 295 (314)
T ss_pred HHHHHHHHHhhcCCCcCcCHHHHhcC
Confidence 45667778999999999999988763
No 150
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=39.21 E-value=25 Score=33.66 Aligned_cols=25 Identities=20% Similarity=0.426 Sum_probs=21.1
Q ss_pred HHHHHHhhcCCCCCCCCCHHHHHHH
Q 045568 306 FIHIGLLCVQEDPADRPNMSSVAVM 330 (379)
Q Consensus 306 ~~~ial~Cv~~~p~~RPtM~~Vv~~ 330 (379)
+.++-..|.+.+|++||++.++++.
T Consensus 277 l~~li~~~L~~~P~~Rpt~~ell~h 301 (331)
T cd06649 277 FQEFVNKCLIKNPAERADLKMLMNH 301 (331)
T ss_pred HHHHHHHHccCCcccCCCHHHHhcC
Confidence 4566678999999999999999754
No 151
>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity
Probab=38.93 E-value=29 Score=31.49 Aligned_cols=24 Identities=29% Similarity=0.600 Sum_probs=19.9
Q ss_pred HHHHHHhhcCCCCCCCCCHHHHHH
Q 045568 306 FIHIGLLCVQEDPADRPNMSSVAV 329 (379)
Q Consensus 306 ~~~ial~Cv~~~p~~RPtM~~Vv~ 329 (379)
+..+-..|...+|.+||++.+++.
T Consensus 233 ~~~li~~~l~~~p~~Rpt~~~ll~ 256 (265)
T cd06605 233 FQDFVNLCLIKDPRERPSYKELLE 256 (265)
T ss_pred HHHHHHHHcCCCchhCcCHHHHhh
Confidence 445566899999999999999875
No 152
>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development
Probab=38.91 E-value=22 Score=32.46 Aligned_cols=23 Identities=17% Similarity=0.216 Sum_probs=17.8
Q ss_pred HHHHHhhcCCCCCCCCCHHHHHH
Q 045568 307 IHIGLLCVQEDPADRPNMSSVAV 329 (379)
Q Consensus 307 ~~ial~Cv~~~p~~RPtM~~Vv~ 329 (379)
++..+.|...+|.+||+|.+|+.
T Consensus 238 ~~~li~~~~~~p~~Rp~~~eil~ 260 (266)
T cd06651 238 ARDFLGCIFVEARHRPSAEELLR 260 (266)
T ss_pred HHHHHHHhcCChhhCcCHHHHhc
Confidence 33345688889999999999864
No 153
>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase. Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea
Probab=38.89 E-value=27 Score=32.11 Aligned_cols=26 Identities=12% Similarity=0.034 Sum_probs=21.5
Q ss_pred HHHHHHHHhhcCCCCCCCCCHHHHHH
Q 045568 304 LKFIHIGLLCVQEDPADRPNMSSVAV 329 (379)
Q Consensus 304 ~~~~~ial~Cv~~~p~~RPtM~~Vv~ 329 (379)
..+..+...|++.+|.+||++.+++.
T Consensus 256 ~~~~~li~~~l~~~p~~R~~~~~~l~ 281 (286)
T cd07832 256 PEALDLLKGLLVYDPSKRLSAAEALR 281 (286)
T ss_pred HHHHHHHHHHhccChhhCCCHHHHhh
Confidence 34566677899999999999998875
No 154
>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati
Probab=38.62 E-value=23 Score=34.04 Aligned_cols=26 Identities=15% Similarity=0.069 Sum_probs=22.2
Q ss_pred HHHHHHHhhcCCCCCCCCCHHHHHHH
Q 045568 305 KFIHIGLLCVQEDPADRPNMSSVAVM 330 (379)
Q Consensus 305 ~~~~ial~Cv~~~p~~RPtM~~Vv~~ 330 (379)
.+..+...|++.+|.+||++.+++.-
T Consensus 266 ~~~~li~~~l~~~P~~Rps~~ell~h 291 (337)
T cd07858 266 LAIDLLEKMLVFDPSKRITVEEALAH 291 (337)
T ss_pred HHHHHHHHHhcCChhhccCHHHHHcC
Confidence 45677889999999999999998754
No 155
>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast
Probab=38.28 E-value=22 Score=31.81 Aligned_cols=25 Identities=24% Similarity=0.456 Sum_probs=20.5
Q ss_pred HHHHHHHhhcCCCCCCCCCHHHHHH
Q 045568 305 KFIHIGLLCVQEDPADRPNMSSVAV 329 (379)
Q Consensus 305 ~~~~ial~Cv~~~p~~RPtM~~Vv~ 329 (379)
.+..+...|++.+|++||++.+++.
T Consensus 226 ~~~~~i~~~l~~~p~~R~~~~~~l~ 250 (254)
T cd06627 226 ELKDFLMQCFQKDPNLRPTAKQLLK 250 (254)
T ss_pred HHHHHHHHHHhCChhhCcCHHHHhc
Confidence 3456667899999999999998874
No 156
>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea
Probab=37.86 E-value=34 Score=31.52 Aligned_cols=30 Identities=13% Similarity=0.217 Sum_probs=25.6
Q ss_pred HHHHHHHhhcCCCCCCCCCHHHHHHHhccC
Q 045568 305 KFIHIGLLCVQEDPADRPNMSSVAVMLASD 334 (379)
Q Consensus 305 ~~~~ial~Cv~~~p~~RPtM~~Vv~~L~~~ 334 (379)
.+..+...|...+|.+||++.+++..|...
T Consensus 239 ~~~~~~~~~l~~~p~~Rp~~~~l~~~l~~~ 268 (279)
T cd05057 239 DVYMVLVKCWMIDAESRPTFKELINEFSKM 268 (279)
T ss_pred HHHHHHHHHcCCChhhCCCHHHHHHHHHHH
Confidence 455667899999999999999999998764
No 157
>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an
Probab=37.73 E-value=30 Score=31.01 Aligned_cols=25 Identities=20% Similarity=0.231 Sum_probs=21.2
Q ss_pred HHHHHHHhhcCCCCCCCCCHHHHHH
Q 045568 305 KFIHIGLLCVQEDPADRPNMSSVAV 329 (379)
Q Consensus 305 ~~~~ial~Cv~~~p~~RPtM~~Vv~ 329 (379)
.+..+...|++.+|.+||++.+++.
T Consensus 228 ~~~~li~~~l~~~p~~Rp~~~~~l~ 252 (256)
T cd08530 228 DLQNFIRSMLQVKPKLRPNCDKILA 252 (256)
T ss_pred HHHHHHHHHcCCCcccCCCHHHHhc
Confidence 4667778999999999999998864
No 158
>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4. Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates
Probab=37.65 E-value=26 Score=32.40 Aligned_cols=26 Identities=23% Similarity=0.487 Sum_probs=21.6
Q ss_pred HHHHHHHhhcCCCCCCCCCHHHHHHH
Q 045568 305 KFIHIGLLCVQEDPADRPNMSSVAVM 330 (379)
Q Consensus 305 ~~~~ial~Cv~~~p~~RPtM~~Vv~~ 330 (379)
.+.++...|.+.+|.+||++.+|++.
T Consensus 242 ~l~~li~~~l~~~p~~Rpt~~~i~~~ 267 (288)
T cd06616 242 SFVNFINLCLIKDESKRPKYKELLEH 267 (288)
T ss_pred HHHHHHHHHccCChhhCcCHHHHhcC
Confidence 45566779999999999999998753
No 159
>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul
Probab=37.55 E-value=28 Score=33.32 Aligned_cols=26 Identities=8% Similarity=-0.013 Sum_probs=22.1
Q ss_pred HHHHHHHhhcCCCCCCCCCHHHHHHH
Q 045568 305 KFIHIGLLCVQEDPADRPNMSSVAVM 330 (379)
Q Consensus 305 ~~~~ial~Cv~~~p~~RPtM~~Vv~~ 330 (379)
.+..+...|.+.+|.+||++.++++.
T Consensus 270 ~l~~li~~~l~~~P~~Rps~~~il~~ 295 (337)
T cd07852 270 DALDLLKKLLVFNPNKRLTAEEALEH 295 (337)
T ss_pred HHHHHHHHhccCCcccccCHHHHhhC
Confidence 35677788999999999999999864
No 160
>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7. Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it
Probab=37.51 E-value=26 Score=32.66 Aligned_cols=26 Identities=23% Similarity=0.419 Sum_probs=21.5
Q ss_pred HHHHHHHhhcCCCCCCCCCHHHHHHH
Q 045568 305 KFIHIGLLCVQEDPADRPNMSSVAVM 330 (379)
Q Consensus 305 ~~~~ial~Cv~~~p~~RPtM~~Vv~~ 330 (379)
.+..+...|.+.+|.+||++.+++..
T Consensus 248 ~l~~li~~~l~~~p~~Rp~~~~il~~ 273 (296)
T cd06618 248 DFCSFVDLCLTKDHRKRPKYRELLQH 273 (296)
T ss_pred HHHHHHHHHccCChhhCCCHHHHhcC
Confidence 35566678999999999999998754
No 161
>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha. Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype
Probab=36.92 E-value=23 Score=33.71 Aligned_cols=25 Identities=32% Similarity=0.599 Sum_probs=21.2
Q ss_pred HHHHHHHhhcCCCCCCCCCHHHHHH
Q 045568 305 KFIHIGLLCVQEDPADRPNMSSVAV 329 (379)
Q Consensus 305 ~~~~ial~Cv~~~p~~RPtM~~Vv~ 329 (379)
.+.++...|.+.+|.+||++.++++
T Consensus 282 ~~~~li~~~l~~dP~~Rpt~~ell~ 306 (327)
T cd08227 282 HFHHFVEQCLQRNPDARPSASTLLN 306 (327)
T ss_pred HHHHHHHHHHhhCchhcCCHHHHhc
Confidence 3556778899999999999999875
No 162
>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina
Probab=36.63 E-value=35 Score=31.18 Aligned_cols=22 Identities=32% Similarity=0.545 Sum_probs=17.6
Q ss_pred HHhhcCCCCCCCCCHHHHHHHhc
Q 045568 310 GLLCVQEDPADRPNMSSVAVMLA 332 (379)
Q Consensus 310 al~Cv~~~p~~RPtM~~Vv~~L~ 332 (379)
-..|. .+|.+||++.+|+++|.
T Consensus 247 ~~~~~-~dp~~Rpt~~~v~~~l~ 268 (269)
T cd05042 247 MQFCW-LDPETRPTAEEVHELLT 268 (269)
T ss_pred HHHHh-cCcccccCHHHHHHHhc
Confidence 34455 49999999999999874
No 163
>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins. Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily
Probab=36.55 E-value=28 Score=32.72 Aligned_cols=26 Identities=27% Similarity=0.393 Sum_probs=21.6
Q ss_pred HHHHHHHhhcCCCCCCCCCHHHHHHH
Q 045568 305 KFIHIGLLCVQEDPADRPNMSSVAVM 330 (379)
Q Consensus 305 ~~~~ial~Cv~~~p~~RPtM~~Vv~~ 330 (379)
.+..+-..|.+.+|.+||+|.+|+..
T Consensus 242 ~~~~li~~~l~~~p~~Rp~~~~il~~ 267 (307)
T cd06607 242 YFRNFVDSCLQKIPQDRPSSEELLKH 267 (307)
T ss_pred HHHHHHHHHhcCChhhCcCHHHHhcC
Confidence 35556679999999999999999864
No 164
>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins. Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic
Probab=36.53 E-value=28 Score=32.44 Aligned_cols=26 Identities=15% Similarity=0.019 Sum_probs=21.6
Q ss_pred HHHHHHHHhhcCCCCCCCCCHHHHHH
Q 045568 304 LKFIHIGLLCVQEDPADRPNMSSVAV 329 (379)
Q Consensus 304 ~~~~~ial~Cv~~~p~~RPtM~~Vv~ 329 (379)
..+.++...|++.+|.+||++.+++.
T Consensus 282 ~~~~~~i~~~l~~~p~~R~t~~ell~ 307 (311)
T cd07866 282 PEGLDLLSKLLSLDPYKRLTASDALE 307 (311)
T ss_pred hhHHHHHHHHcccCcccCcCHHHHhc
Confidence 34667788899999999999988764
No 165
>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4. Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.
Probab=36.40 E-value=30 Score=31.48 Aligned_cols=24 Identities=21% Similarity=0.358 Sum_probs=19.7
Q ss_pred HHHHHHhhcCCCCCCCCCHHHHHH
Q 045568 306 FIHIGLLCVQEDPADRPNMSSVAV 329 (379)
Q Consensus 306 ~~~ial~Cv~~~p~~RPtM~~Vv~ 329 (379)
+..+-..|++.+|.+||++.+|+.
T Consensus 238 ~~~~i~~~l~~~p~~Rp~~~~~l~ 261 (265)
T cd06631 238 AIDFVTSCLTRDQHERPSALQLLR 261 (265)
T ss_pred HHHHHHHHhcCCcccCCCHHHHhc
Confidence 455667899999999999998764
No 166
>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the
Probab=36.34 E-value=32 Score=31.42 Aligned_cols=25 Identities=20% Similarity=0.109 Sum_probs=21.4
Q ss_pred HHHHHHHhhcCCCCCCCCCHHHHHH
Q 045568 305 KFIHIGLLCVQEDPADRPNMSSVAV 329 (379)
Q Consensus 305 ~~~~ial~Cv~~~p~~RPtM~~Vv~ 329 (379)
.+.++...|++.+|.+||++.+|+.
T Consensus 254 ~~~~~i~~~l~~~P~~Rp~~~~~l~ 278 (282)
T cd07829 254 EGIDLLSKMLQYNPAKRISAKEALK 278 (282)
T ss_pred HHHHHHHHhhccCcccCCCHHHHhh
Confidence 4667778899999999999999875
No 167
>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ
Probab=36.02 E-value=26 Score=31.66 Aligned_cols=25 Identities=24% Similarity=0.474 Sum_probs=21.5
Q ss_pred HHHHHHHhhcCCCCCCCCCHHHHHH
Q 045568 305 KFIHIGLLCVQEDPADRPNMSSVAV 329 (379)
Q Consensus 305 ~~~~ial~Cv~~~p~~RPtM~~Vv~ 329 (379)
.+..+..+|.+.+|.+||++.+|+.
T Consensus 235 ~~~~li~~~l~~~p~~Rpt~~~il~ 259 (262)
T cd06613 235 VFHDFIKKCLTKDPKKRPTATKLLQ 259 (262)
T ss_pred HHHHHHHHHcCCChhhCCCHHHHhc
Confidence 4567788999999999999998874
No 168
>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent
Probab=35.47 E-value=36 Score=31.20 Aligned_cols=26 Identities=15% Similarity=0.311 Sum_probs=21.3
Q ss_pred HHHHHHHhhcCCCCCCCCCHHHHHHH
Q 045568 305 KFIHIGLLCVQEDPADRPNMSSVAVM 330 (379)
Q Consensus 305 ~~~~ial~Cv~~~p~~RPtM~~Vv~~ 330 (379)
.+..+...|.+.+|.+||++.+++..
T Consensus 230 ~~~~~i~~~l~~~p~~R~~~~~il~~ 255 (277)
T cd06917 230 LLREFVAACLDEEPKERLSAEELLKS 255 (277)
T ss_pred HHHHHHHHHcCCCcccCcCHHHHhhC
Confidence 34556678999999999999999763
No 169
>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla
Probab=35.20 E-value=30 Score=32.04 Aligned_cols=24 Identities=25% Similarity=0.224 Sum_probs=20.2
Q ss_pred HHHHHHhhcCCCCCCCCCHHHHHH
Q 045568 306 FIHIGLLCVQEDPADRPNMSSVAV 329 (379)
Q Consensus 306 ~~~ial~Cv~~~p~~RPtM~~Vv~ 329 (379)
+..+-..|++.+|++||++.++++
T Consensus 263 ~~~li~~~l~~~P~~R~s~~~~l~ 286 (290)
T cd07862 263 GKDLLLKCLTFNPAKRISAYSALS 286 (290)
T ss_pred HHHHHHHHhccCchhcCCHHHHhc
Confidence 346778899999999999998874
No 170
>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of
Probab=34.75 E-value=36 Score=30.68 Aligned_cols=26 Identities=27% Similarity=0.521 Sum_probs=21.1
Q ss_pred HHHHHHHhhcCCCCCCCCCHHHHHHH
Q 045568 305 KFIHIGLLCVQEDPADRPNMSSVAVM 330 (379)
Q Consensus 305 ~~~~ial~Cv~~~p~~RPtM~~Vv~~ 330 (379)
.+..+-..|++.+|.+||++.++++.
T Consensus 231 ~l~~li~~~l~~~p~~R~~~~~ll~~ 256 (264)
T cd06623 231 EFRDFISACLQKDPKKRPSAAELLQH 256 (264)
T ss_pred HHHHHHHHHccCChhhCCCHHHHHhC
Confidence 45556667999999999999998863
No 171
>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl
Probab=34.62 E-value=30 Score=32.18 Aligned_cols=25 Identities=16% Similarity=0.098 Sum_probs=20.9
Q ss_pred HHHHHHHhhcCCCCCCCCCHHHHHH
Q 045568 305 KFIHIGLLCVQEDPADRPNMSSVAV 329 (379)
Q Consensus 305 ~~~~ial~Cv~~~p~~RPtM~~Vv~ 329 (379)
.+.++...|++.+|.+||++.+++.
T Consensus 282 ~~~dli~~~l~~~P~~R~t~~e~l~ 306 (310)
T cd07865 282 HALDLIDKLLVLDPAKRIDADTALN 306 (310)
T ss_pred HHHHHHHHHhcCChhhccCHHHHhc
Confidence 3456788999999999999998864
No 172
>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They
Probab=34.14 E-value=33 Score=30.60 Aligned_cols=25 Identities=20% Similarity=0.453 Sum_probs=20.9
Q ss_pred HHHHHHHhhcCCCCCCCCCHHHHHH
Q 045568 305 KFIHIGLLCVQEDPADRPNMSSVAV 329 (379)
Q Consensus 305 ~~~~ial~Cv~~~p~~RPtM~~Vv~ 329 (379)
.+..+...|+..+|.+||+..+++.
T Consensus 230 ~~~~~i~~~l~~~p~~Rp~~~~ll~ 254 (258)
T cd08215 230 ELRNLVSSLLQKDPEERPSIAQILQ 254 (258)
T ss_pred HHHHHHHHHcCCChhhCcCHHHHhc
Confidence 3556677999999999999999865
No 173
>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the
Probab=33.58 E-value=32 Score=31.87 Aligned_cols=25 Identities=16% Similarity=0.149 Sum_probs=20.5
Q ss_pred HHHHHHHhhcCCCCCCCCCHHHHHH
Q 045568 305 KFIHIGLLCVQEDPADRPNMSSVAV 329 (379)
Q Consensus 305 ~~~~ial~Cv~~~p~~RPtM~~Vv~ 329 (379)
.+.++...|++.+|.+||++.+++.
T Consensus 263 ~~~~li~~~L~~~p~~Rps~~e~l~ 287 (291)
T cd07844 263 HGEELALKFLQYEPKKRISAAEAMK 287 (291)
T ss_pred hHHHHHHHHhccCcccccCHHHHhc
Confidence 4456678899999999999998764
No 174
>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1. Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron
Probab=33.25 E-value=37 Score=32.19 Aligned_cols=26 Identities=27% Similarity=0.451 Sum_probs=22.0
Q ss_pred HHHHHHhhcCCCCCCCCCHHHHHHHh
Q 045568 306 FIHIGLLCVQEDPADRPNMSSVAVML 331 (379)
Q Consensus 306 ~~~ial~Cv~~~p~~RPtM~~Vv~~L 331 (379)
+..+...|.+.+|.+||++.+|++.+
T Consensus 253 l~~li~~~l~~~p~~Rpt~~~il~~~ 278 (317)
T cd06635 253 FRNFVDSCLQKIPQDRPTSEELLKHM 278 (317)
T ss_pred HHHHHHHHccCCcccCcCHHHHHhCh
Confidence 45666789999999999999998754
No 175
>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase
Probab=33.09 E-value=31 Score=33.02 Aligned_cols=26 Identities=12% Similarity=0.069 Sum_probs=22.5
Q ss_pred HHHHHHHhhcCCCCCCCCCHHHHHHH
Q 045568 305 KFIHIGLLCVQEDPADRPNMSSVAVM 330 (379)
Q Consensus 305 ~~~~ial~Cv~~~p~~RPtM~~Vv~~ 330 (379)
.+..+...|.+.+|.+||++.+++..
T Consensus 267 ~~~~li~~~l~~dP~~Rpt~~e~l~h 292 (336)
T cd07849 267 KALDLLDKMLTFNPHKRITVEEALAH 292 (336)
T ss_pred HHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 45678889999999999999998875
No 176
>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase. Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm
Probab=33.03 E-value=33 Score=31.73 Aligned_cols=24 Identities=17% Similarity=0.141 Sum_probs=20.0
Q ss_pred HHHHHHhhcCCCCCCCCCHHHHHH
Q 045568 306 FIHIGLLCVQEDPADRPNMSSVAV 329 (379)
Q Consensus 306 ~~~ial~Cv~~~p~~RPtM~~Vv~ 329 (379)
+..+-..|.+.+|.+||++.+++.
T Consensus 267 ~~~~i~~~l~~~P~~R~~~~eil~ 290 (295)
T cd07837 267 GLDLLQKMLRYDPAKRISAKAALT 290 (295)
T ss_pred HHHHHHHHccCChhhcCCHHHHhc
Confidence 455667899999999999988764
No 177
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=32.99 E-value=40 Score=32.34 Aligned_cols=24 Identities=25% Similarity=0.562 Sum_probs=20.8
Q ss_pred HHHHHHhhcCCCCCCCCCHHHHHH
Q 045568 306 FIHIGLLCVQEDPADRPNMSSVAV 329 (379)
Q Consensus 306 ~~~ial~Cv~~~p~~RPtM~~Vv~ 329 (379)
+.++-..|.+.+|.+||++.+++.
T Consensus 275 ~~~li~~~L~~~P~~Rpt~~ell~ 298 (333)
T cd06650 275 FQDFVNKCLIKNPAERADLKQLMV 298 (333)
T ss_pred HHHHHHHhccCCcccCcCHHHHhh
Confidence 556778899999999999999864
No 178
>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the
Probab=32.87 E-value=37 Score=31.53 Aligned_cols=24 Identities=17% Similarity=0.036 Sum_probs=19.4
Q ss_pred HHHHHHhhcCCCCCCCCCHHHHHH
Q 045568 306 FIHIGLLCVQEDPADRPNMSSVAV 329 (379)
Q Consensus 306 ~~~ial~Cv~~~p~~RPtM~~Vv~ 329 (379)
+..+-..|++.+|++||++.+++.
T Consensus 266 ~~~li~~~l~~~p~~R~t~~ell~ 289 (293)
T cd07843 266 GFDLLNRLLTYDPAKRISAEDALK 289 (293)
T ss_pred HHHHHHHHhccCccccCCHHHHhc
Confidence 344556899999999999998874
No 179
>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely
Probab=32.81 E-value=34 Score=31.78 Aligned_cols=25 Identities=12% Similarity=0.046 Sum_probs=20.6
Q ss_pred HHHHHHHhhcCCCCCCCCCHHHHHH
Q 045568 305 KFIHIGLLCVQEDPADRPNMSSVAV 329 (379)
Q Consensus 305 ~~~~ial~Cv~~~p~~RPtM~~Vv~ 329 (379)
.+..+...|.+.+|.+||++.+|+.
T Consensus 274 ~~~~li~~~l~~~P~~Rp~~~~il~ 298 (302)
T cd07864 274 PALDLLDHMLTLDPSKRCTAEEALN 298 (302)
T ss_pred HHHHHHHHHccCChhhCCCHHHHhc
Confidence 3556677899999999999988864
No 180
>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check
Probab=32.63 E-value=40 Score=30.55 Aligned_cols=25 Identities=20% Similarity=0.311 Sum_probs=20.2
Q ss_pred HHHHHHHhhcCCCCCCCCCHHHHHH
Q 045568 305 KFIHIGLLCVQEDPADRPNMSSVAV 329 (379)
Q Consensus 305 ~~~~ial~Cv~~~p~~RPtM~~Vv~ 329 (379)
.+..+-..|++.+|++||++.++++
T Consensus 232 ~~~~li~~~l~~~p~~Rp~~~~il~ 256 (260)
T cd08222 232 QLNSIMQSMLNKDPSLRPSAAEILR 256 (260)
T ss_pred HHHHHHHHHhcCChhhCcCHHHHhh
Confidence 3455666899999999999998864
No 181
>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=32.13 E-value=43 Score=34.52 Aligned_cols=33 Identities=36% Similarity=0.619 Sum_probs=25.8
Q ss_pred HHHHHHHHHHHHhhcCCCCCCCCCHHHHHHHhccCC
Q 045568 300 AAELLKFIHIGLLCVQEDPADRPNMSSVAVMLASDA 335 (379)
Q Consensus 300 ~~~l~~~~~ial~Cv~~~p~~RPtM~~Vv~~L~~~~ 335 (379)
..++..++. .|...+|++||+|.+|.+.|+...
T Consensus 389 p~~~~~~~~---~c~~~~p~~R~tm~~i~~~l~~~~ 421 (474)
T KOG0194|consen 389 PKELAKVMK---QCWKKDPEDRPTMSTIKKKLEALE 421 (474)
T ss_pred HHHHHHHHH---HhccCChhhccCHHHHHHHHHHHH
Confidence 344444444 899999999999999999997653
No 182
>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also
Probab=32.11 E-value=36 Score=31.29 Aligned_cols=24 Identities=8% Similarity=-0.090 Sum_probs=20.0
Q ss_pred HHHHHHhhcCCCCCCCCCHHHHHH
Q 045568 306 FIHIGLLCVQEDPADRPNMSSVAV 329 (379)
Q Consensus 306 ~~~ial~Cv~~~p~~RPtM~~Vv~ 329 (379)
+..+-..|++.+|.+||++.+++.
T Consensus 257 ~~~li~~~l~~~P~~R~t~~~il~ 280 (284)
T cd07839 257 GRDLLQNLLVCNPVQRISAEEALQ 280 (284)
T ss_pred HHHHHHHHhcCChhhcCCHHHHhc
Confidence 445677899999999999998864
No 183
>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=31.67 E-value=37 Score=31.78 Aligned_cols=24 Identities=17% Similarity=0.202 Sum_probs=20.0
Q ss_pred HHHHHHhhcCCCCCCCCCHHHHHH
Q 045568 306 FIHIGLLCVQEDPADRPNMSSVAV 329 (379)
Q Consensus 306 ~~~ial~Cv~~~p~~RPtM~~Vv~ 329 (379)
+..+...|.+.+|.+||++.+|+.
T Consensus 245 ~~~li~~~l~~~p~~Rps~~~il~ 268 (297)
T cd06656 245 FRDFLNRCLEMDVDRRGSAKELLQ 268 (297)
T ss_pred HHHHHHHHccCChhhCcCHHHHhc
Confidence 344567899999999999999876
No 184
>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines
Probab=31.32 E-value=33 Score=31.76 Aligned_cols=29 Identities=10% Similarity=0.055 Sum_probs=23.8
Q ss_pred HHHHHHhhcCCCCCCCCCHHHHHHHhccC
Q 045568 306 FIHIGLLCVQEDPADRPNMSSVAVMLASD 334 (379)
Q Consensus 306 ~~~ial~Cv~~~p~~RPtM~~Vv~~L~~~ 334 (379)
+..+...|++.+|.+||++.+|.+.|+..
T Consensus 239 l~~li~~~l~~~p~~R~t~~~~~~~l~~~ 267 (288)
T cd05583 239 ARDFIQKLLEKDPKKRLGANGADEIKNHP 267 (288)
T ss_pred HHHHHHHHhcCCHhhccCcchHHHHhcCc
Confidence 34556689999999999999999888753
No 185
>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK
Probab=31.17 E-value=37 Score=32.67 Aligned_cols=25 Identities=16% Similarity=0.066 Sum_probs=21.3
Q ss_pred HHHHHHHhhcCCCCCCCCCHHHHHH
Q 045568 305 KFIHIGLLCVQEDPADRPNMSSVAV 329 (379)
Q Consensus 305 ~~~~ial~Cv~~~p~~RPtM~~Vv~ 329 (379)
.+..+...|++.+|.+||++.+|+.
T Consensus 273 ~l~dli~~~l~~~P~~Rpt~~ell~ 297 (343)
T cd07851 273 LAIDLLEKMLVLDPDKRITAAEALA 297 (343)
T ss_pred HHHHHHHHhCCCChhhCCCHHHHhc
Confidence 4667778899999999999999864
No 186
>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos
Probab=31.08 E-value=39 Score=32.06 Aligned_cols=25 Identities=20% Similarity=0.212 Sum_probs=20.9
Q ss_pred HHHHHHhhcCCCCCCCCCHHHHHHH
Q 045568 306 FIHIGLLCVQEDPADRPNMSSVAVM 330 (379)
Q Consensus 306 ~~~ial~Cv~~~p~~RPtM~~Vv~~ 330 (379)
+..+...|++.+|.+||++.+++..
T Consensus 266 ~~~li~~~l~~~P~~Rpt~~e~l~h 290 (338)
T cd07859 266 ALRLLERLLAFDPKDRPTAEEALAD 290 (338)
T ss_pred HHHHHHHHcCcCcccCCCHHHHhcC
Confidence 4567778999999999999998753
No 187
>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=30.44 E-value=44 Score=31.27 Aligned_cols=25 Identities=16% Similarity=0.181 Sum_probs=20.8
Q ss_pred HHHHHHhhcCCCCCCCCCHHHHHHH
Q 045568 306 FIHIGLLCVQEDPADRPNMSSVAVM 330 (379)
Q Consensus 306 ~~~ial~Cv~~~p~~RPtM~~Vv~~ 330 (379)
+..+-..|.+.+|.+||++.+++..
T Consensus 246 l~~li~~~l~~~p~~Rpt~~eil~~ 270 (296)
T cd06654 246 FRDFLNRCLDMDVEKRGSAKELLQH 270 (296)
T ss_pred HHHHHHHHCcCCcccCcCHHHHhhC
Confidence 4456678999999999999999863
No 188
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=30.40 E-value=41 Score=32.46 Aligned_cols=26 Identities=15% Similarity=0.063 Sum_probs=21.7
Q ss_pred HHHHHHHhhcCCCCCCCCCHHHHHHH
Q 045568 305 KFIHIGLLCVQEDPADRPNMSSVAVM 330 (379)
Q Consensus 305 ~~~~ial~Cv~~~p~~RPtM~~Vv~~ 330 (379)
.+..+-..|++.+|.+||++.++++.
T Consensus 286 ~~~~li~~mL~~dP~~Rps~~ell~h 311 (355)
T cd07874 286 QARDLLSKMLVIDPAKRISVDEALQH 311 (355)
T ss_pred HHHHHHHHHhcCCchhcCCHHHHhcC
Confidence 34566778999999999999998864
No 189
>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]
Probab=30.21 E-value=45 Score=33.05 Aligned_cols=30 Identities=23% Similarity=0.326 Sum_probs=24.5
Q ss_pred HHHHHHHhhcCCCCCCCCCHHHHHHHhccC
Q 045568 305 KFIHIGLLCVQEDPADRPNMSSVAVMLASD 334 (379)
Q Consensus 305 ~~~~ial~Cv~~~p~~RPtM~~Vv~~L~~~ 334 (379)
.+..+-..|=+.+|..||++.+++.+|+.+
T Consensus 274 ~l~~l~~~CW~~dp~~RP~f~ei~~~l~~~ 303 (362)
T KOG0192|consen 274 HLSSLMERCWLVDPSRRPSFLEIVSRLESI 303 (362)
T ss_pred HHHHHHHHhCCCCCCcCCCHHHHHHHHHHH
Confidence 344455569999999999999999999754
No 190
>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=30.12 E-value=43 Score=30.43 Aligned_cols=24 Identities=21% Similarity=0.475 Sum_probs=19.6
Q ss_pred HHHHHHhhcCCCCCCCCCHHHHHH
Q 045568 306 FIHIGLLCVQEDPADRPNMSSVAV 329 (379)
Q Consensus 306 ~~~ial~Cv~~~p~~RPtM~~Vv~ 329 (379)
+.++...|.+.+|++||++.+++.
T Consensus 241 ~~~li~~~l~~~P~~R~~~~~ll~ 264 (267)
T cd06645 241 FHHFVKMALTKNPKKRPTAEKLLQ 264 (267)
T ss_pred HHHHHHHHccCCchhCcCHHHHhc
Confidence 445667799999999999988764
No 191
>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti
Probab=30.12 E-value=38 Score=31.11 Aligned_cols=24 Identities=29% Similarity=0.542 Sum_probs=19.6
Q ss_pred HHHHHHhhcCCCCCCCCCHHHHHH
Q 045568 306 FIHIGLLCVQEDPADRPNMSSVAV 329 (379)
Q Consensus 306 ~~~ial~Cv~~~p~~RPtM~~Vv~ 329 (379)
+..+...|.+.+|.+||++.+|++
T Consensus 238 ~~~li~~~l~~~p~~Rps~~~il~ 261 (280)
T cd06611 238 FNDFLKSCLVKDPDDRPTAAELLK 261 (280)
T ss_pred HHHHHHHHhccChhhCcCHHHHhc
Confidence 345566899999999999998865
No 192
>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate
Probab=29.98 E-value=47 Score=30.11 Aligned_cols=24 Identities=17% Similarity=0.120 Sum_probs=19.3
Q ss_pred HHHHHHhhcCCCCCCCCCHHHHHH
Q 045568 306 FIHIGLLCVQEDPADRPNMSSVAV 329 (379)
Q Consensus 306 ~~~ial~Cv~~~p~~RPtM~~Vv~ 329 (379)
+..+-..|.+.+|.+||++.+|++
T Consensus 240 ~~~li~~~l~~~p~~Rp~~~~il~ 263 (267)
T cd06628 240 AIDFLEKTFEIDHNKRPTAAELLK 263 (267)
T ss_pred HHHHHHHHccCCchhCcCHHHHhh
Confidence 344456899999999999988875
No 193
>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou
Probab=29.92 E-value=44 Score=30.84 Aligned_cols=26 Identities=23% Similarity=0.443 Sum_probs=21.5
Q ss_pred HHHHHHHhhcCCCCCCCCCHHHHHHH
Q 045568 305 KFIHIGLLCVQEDPADRPNMSSVAVM 330 (379)
Q Consensus 305 ~~~~ial~Cv~~~p~~RPtM~~Vv~~ 330 (379)
.+..+-..|++.+|.+||++.+|+..
T Consensus 245 ~l~~li~~~l~~~p~~Rpt~~~il~~ 270 (286)
T cd06614 245 EFKDFLNKCLVKDPEKRPSAEELLQH 270 (286)
T ss_pred HHHHHHHHHhccChhhCcCHHHHhhC
Confidence 34566788999999999999999764
No 194
>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re
Probab=29.32 E-value=35 Score=30.71 Aligned_cols=29 Identities=17% Similarity=0.163 Sum_probs=23.3
Q ss_pred HHHHHHHhhcCCCCCCCCCHHHHHHHhcc
Q 045568 305 KFIHIGLLCVQEDPADRPNMSSVAVMLAS 333 (379)
Q Consensus 305 ~~~~ial~Cv~~~p~~RPtM~~Vv~~L~~ 333 (379)
.+..+-..|++.+|.+||++.+|.+.|+.
T Consensus 229 ~~~~~i~~~l~~~p~~Rpt~~~~~~~l~~ 257 (265)
T cd05579 229 EAIDLISKLLVPDPEKRLGAKSIEEIKNH 257 (265)
T ss_pred HHHHHHHHHhcCCHhhcCCCccHHHHhcC
Confidence 44566678899999999999888877764
No 195
>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co
Probab=29.16 E-value=47 Score=31.69 Aligned_cols=25 Identities=12% Similarity=0.054 Sum_probs=20.8
Q ss_pred HHHHHHHhhcCCCCCCCCCHHHHHH
Q 045568 305 KFIHIGLLCVQEDPADRPNMSSVAV 329 (379)
Q Consensus 305 ~~~~ial~Cv~~~p~~RPtM~~Vv~ 329 (379)
.+..+...|++.+|.+||++.+++.
T Consensus 267 ~~~~li~~~l~~~P~~R~t~~~ll~ 291 (332)
T cd07857 267 LALDLLEKLLAFDPTKRISVEEALE 291 (332)
T ss_pred HHHHHHHHHccCCcccCCCHHHHhc
Confidence 4566778899999999999998753
No 196
>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85. Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.
Probab=28.77 E-value=45 Score=30.58 Aligned_cols=24 Identities=17% Similarity=-0.004 Sum_probs=19.7
Q ss_pred HHHHHHhhcCCCCCCCCCHHHHHH
Q 045568 306 FIHIGLLCVQEDPADRPNMSSVAV 329 (379)
Q Consensus 306 ~~~ial~Cv~~~p~~RPtM~~Vv~ 329 (379)
+.++-..|++.+|.+||++.++++
T Consensus 257 ~~~~i~~~l~~~p~~R~~~~~~l~ 280 (284)
T cd07836 257 GIDLLHRLLQLNPELRISAHDALQ 280 (284)
T ss_pred HHHHHHHHhcCCcccCCCHHHHhc
Confidence 445667899999999999988864
No 197
>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou
Probab=28.51 E-value=48 Score=30.55 Aligned_cols=24 Identities=13% Similarity=-0.025 Sum_probs=19.7
Q ss_pred HHHHHHhhcCCCCCCCCCHHHHHH
Q 045568 306 FIHIGLLCVQEDPADRPNMSSVAV 329 (379)
Q Consensus 306 ~~~ial~Cv~~~p~~RPtM~~Vv~ 329 (379)
+..+-..|++.+|.+||++.+++.
T Consensus 261 ~~~li~~~L~~dP~~R~t~~~~l~ 284 (288)
T cd07863 261 GAQLLLEMLTFNPHKRISAFRALQ 284 (288)
T ss_pred HHHHHHHHhccCcccCCCHHHHhc
Confidence 456667899999999999988763
No 198
>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase. Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.
Probab=28.45 E-value=43 Score=30.84 Aligned_cols=24 Identities=13% Similarity=0.198 Sum_probs=19.7
Q ss_pred HHHHHHhhcCCCCCCCCCHHHHHH
Q 045568 306 FIHIGLLCVQEDPADRPNMSSVAV 329 (379)
Q Consensus 306 ~~~ial~Cv~~~p~~RPtM~~Vv~ 329 (379)
+.++-..|.+.+|.+||++.++++
T Consensus 238 ~~~li~~~l~~~p~~Rp~~~~il~ 261 (282)
T cd06643 238 FKDFLKKCLEKNVDARWTTTQLLQ 261 (282)
T ss_pred HHHHHHHHccCChhhCcCHHHHhc
Confidence 445557899999999999988764
No 199
>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13
Probab=28.17 E-value=43 Score=32.17 Aligned_cols=24 Identities=8% Similarity=-0.018 Sum_probs=20.7
Q ss_pred HHHHHHhhcCCCCCCCCCHHHHHH
Q 045568 306 FIHIGLLCVQEDPADRPNMSSVAV 329 (379)
Q Consensus 306 ~~~ial~Cv~~~p~~RPtM~~Vv~ 329 (379)
+..+-..|++.+|.+||++.+|+.
T Consensus 273 ~~~li~~~l~~dP~~R~~~~e~l~ 296 (342)
T cd07879 273 AVDLLEKMLELDVDKRLTATEALE 296 (342)
T ss_pred HHHHHHHHcCCChhhCcCHHHHhc
Confidence 456777899999999999999974
No 200
>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun
Probab=27.96 E-value=44 Score=31.00 Aligned_cols=25 Identities=16% Similarity=0.167 Sum_probs=20.9
Q ss_pred HHHHHHHhhcCCCCCCCCCHHHHHH
Q 045568 305 KFIHIGLLCVQEDPADRPNMSSVAV 329 (379)
Q Consensus 305 ~~~~ial~Cv~~~p~~RPtM~~Vv~ 329 (379)
.+..+...|++.+|.+||++.++++
T Consensus 244 ~l~~li~~~l~~~p~~Rpt~~~il~ 268 (285)
T cd06648 244 RLRSFLDRMLVRDPAQRATAAELLN 268 (285)
T ss_pred HHHHHHHHHcccChhhCcCHHHHcc
Confidence 4566777899999999999998875
No 201
>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase. Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.
Probab=27.66 E-value=51 Score=30.58 Aligned_cols=25 Identities=16% Similarity=0.325 Sum_probs=20.4
Q ss_pred HHHHHHHhhcCCCCCCCCCHHHHHH
Q 045568 305 KFIHIGLLCVQEDPADRPNMSSVAV 329 (379)
Q Consensus 305 ~~~~ial~Cv~~~p~~RPtM~~Vv~ 329 (379)
.+..+-..|.+.+|.+||++.+|++
T Consensus 244 ~~~~li~~~l~~~p~~Rp~~~~il~ 268 (292)
T cd06644 244 EFRDFLKTALDKHPETRPSAAQLLE 268 (292)
T ss_pred HHHHHHHHHhcCCcccCcCHHHHhc
Confidence 3455667899999999999998865
No 202
>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5. Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the
Probab=27.48 E-value=51 Score=31.47 Aligned_cols=26 Identities=15% Similarity=0.158 Sum_probs=21.8
Q ss_pred HHHHHHHhhcCCCCCCCCCHHHHHHH
Q 045568 305 KFIHIGLLCVQEDPADRPNMSSVAVM 330 (379)
Q Consensus 305 ~~~~ial~Cv~~~p~~RPtM~~Vv~~ 330 (379)
.+..+-..|++.+|.+||++.+++..
T Consensus 269 ~~~~li~~~l~~~P~~Rpt~~~~l~~ 294 (334)
T cd07855 269 EALDLLSQMLQFDPEERITVEQALQH 294 (334)
T ss_pred HHHHHHHHHccCChhhCcCHHHHHhC
Confidence 45667788999999999999998763
No 203
>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2. Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin
Probab=27.40 E-value=59 Score=30.60 Aligned_cols=26 Identities=27% Similarity=0.372 Sum_probs=21.2
Q ss_pred HHHHHHhhcCCCCCCCCCHHHHHHHh
Q 045568 306 FIHIGLLCVQEDPADRPNMSSVAVML 331 (379)
Q Consensus 306 ~~~ial~Cv~~~p~~RPtM~~Vv~~L 331 (379)
+..+--.|++.+|.+||++.+|+...
T Consensus 243 ~~~li~~cl~~~P~~Rp~~~~ll~~~ 268 (308)
T cd06634 243 FRNFVDSCLQKIPQDRPTSEVLLKHR 268 (308)
T ss_pred HHHHHHHHhhCCcccCCCHHHHhhCc
Confidence 44556689999999999999988653
No 204
>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess
Probab=26.97 E-value=51 Score=30.48 Aligned_cols=24 Identities=13% Similarity=0.058 Sum_probs=19.4
Q ss_pred HHHHHHhhcCCCCCCCCCHHHHHH
Q 045568 306 FIHIGLLCVQEDPADRPNMSSVAV 329 (379)
Q Consensus 306 ~~~ial~Cv~~~p~~RPtM~~Vv~ 329 (379)
+.++...|++.+|.+||++.+++.
T Consensus 264 ~~~ll~~~l~~dp~~R~t~~~~l~ 287 (291)
T cd07870 264 AEDLASQMLMMFPKDRISAQDALL 287 (291)
T ss_pred HHHHHHHHhCcCcccCcCHHHHhc
Confidence 345567899999999999998763
No 205
>PF08105 Antimicrobial10: Metchnikowin family; InterPro: IPR012513 This family consists of the metchnikowin family of antimicrobial peptides from Drosophila. metchnikowin is a proline-rich peptide whose expression is immune-inducible. Induction of the metchnikowin gene expression can be mediated either by the TOLL pathway or by the imd gene product. The metchnikowin peptide is unique among the Drosophila antimicrobial peptides in that it is active against both bacteria and fungi [].
Probab=26.52 E-value=71 Score=21.95 Aligned_cols=25 Identities=24% Similarity=0.426 Sum_probs=15.0
Q ss_pred CchHHHHHHHHHHHHHHhcccccCC
Q 045568 1 MNMNIILVFLSVLSFLISLPRAYGD 25 (379)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~ 25 (379)
|+.++..++|.+|.++.....+...
T Consensus 1 Mqlnlg~i~l~lL~ll~~~~~~~~e 25 (52)
T PF08105_consen 1 MQLNLGAIFLALLGLLALAGSVLTE 25 (52)
T ss_pred CcccHHHHHHHHHHHHHhccccccc
Confidence 7777777777666655554444333
No 206
>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t
Probab=26.32 E-value=59 Score=29.35 Aligned_cols=25 Identities=12% Similarity=0.045 Sum_probs=20.3
Q ss_pred HHHHHHhhcCCCCCCCCCHHHHHHH
Q 045568 306 FIHIGLLCVQEDPADRPNMSSVAVM 330 (379)
Q Consensus 306 ~~~ial~Cv~~~p~~RPtM~~Vv~~ 330 (379)
+..+-..|++.+|.+||++.+++..
T Consensus 236 ~~~li~~~l~~~p~~Rpt~~~ll~~ 260 (263)
T cd06625 236 ARNFLRRTFVENAKKRPSAEELLRH 260 (263)
T ss_pred HHHHHHHHhhcCcccCCCHHHHhhC
Confidence 4455568999999999999998763
No 207
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=26.30 E-value=53 Score=31.70 Aligned_cols=25 Identities=28% Similarity=0.396 Sum_probs=20.4
Q ss_pred HHHHHHhhcCCCCCCCCCHHHHHHH
Q 045568 306 FIHIGLLCVQEDPADRPNMSSVAVM 330 (379)
Q Consensus 306 ~~~ial~Cv~~~p~~RPtM~~Vv~~ 330 (379)
+..+-..|++.+|.+||++.++++-
T Consensus 304 l~~li~~~l~~~P~~Rpt~~ell~h 328 (353)
T PLN00034 304 FRHFISCCLQREPAKRWSAMQLLQH 328 (353)
T ss_pred HHHHHHHHccCChhhCcCHHHHhcC
Confidence 4455568999999999999998763
No 208
>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3. Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co
Probab=26.29 E-value=51 Score=31.18 Aligned_cols=25 Identities=24% Similarity=0.396 Sum_probs=20.5
Q ss_pred HHHHHHhhcCCCCCCCCCHHHHHHH
Q 045568 306 FIHIGLLCVQEDPADRPNMSSVAVM 330 (379)
Q Consensus 306 ~~~ial~Cv~~~p~~RPtM~~Vv~~ 330 (379)
+..+-..|++.+|.+||++.+++..
T Consensus 249 l~~li~~~l~~~P~~Rp~~~~~l~~ 273 (313)
T cd06633 249 FRGFVDYCLQKIPQERPASAELLRH 273 (313)
T ss_pred HHHHHHHHccCChhhCcCHHHHhcC
Confidence 4456668999999999999988753
No 209
>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK
Probab=25.70 E-value=51 Score=31.78 Aligned_cols=25 Identities=12% Similarity=0.054 Sum_probs=21.5
Q ss_pred HHHHHHHhhcCCCCCCCCCHHHHHH
Q 045568 305 KFIHIGLLCVQEDPADRPNMSSVAV 329 (379)
Q Consensus 305 ~~~~ial~Cv~~~p~~RPtM~~Vv~ 329 (379)
.+.++-..|.+.+|.+||++.+++.
T Consensus 286 ~~~~li~~~L~~dP~~R~t~~eiL~ 310 (353)
T cd07850 286 QARDLLSKMLVIDPEKRISVDDALQ 310 (353)
T ss_pred HHHHHHHHHcCCChhhCcCHHHHhc
Confidence 4557778999999999999999975
No 210
>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U
Probab=25.70 E-value=56 Score=31.23 Aligned_cols=26 Identities=15% Similarity=0.068 Sum_probs=20.9
Q ss_pred HHHHHHHhhcCCCCCCCCCHHHHHHH
Q 045568 305 KFIHIGLLCVQEDPADRPNMSSVAVM 330 (379)
Q Consensus 305 ~~~~ial~Cv~~~p~~RPtM~~Vv~~ 330 (379)
.+..+...|++.+|.+||++.+++..
T Consensus 263 ~~~~li~~~l~~~P~~R~t~~ell~~ 288 (328)
T cd07856 263 SAIDLLEKMLVFDPQKRISAAEALAH 288 (328)
T ss_pred HHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 45566677999999999999988654
No 211
>PF08194 DIM: DIM protein; InterPro: IPR013172 Drosophila immune-induced molecules (DIMs) are short proteins induced during the immune response of Drosophila []. This entry includes DIMs 1 to 4 and DIM23.
Probab=25.44 E-value=71 Score=20.56 Aligned_cols=7 Identities=14% Similarity=0.135 Sum_probs=3.9
Q ss_pred cccCCCC
Q 045568 27 WYEGHVC 33 (379)
Q Consensus 27 ~~~~~~C 33 (379)
.+++..|
T Consensus 26 ViING~C 32 (36)
T PF08194_consen 26 VIINGKC 32 (36)
T ss_pred EEECcee
Confidence 4556556
No 212
>PLN00181 protein SPA1-RELATED; Provisional
Probab=25.37 E-value=52 Score=36.05 Aligned_cols=25 Identities=28% Similarity=0.385 Sum_probs=20.8
Q ss_pred HHHHHHHhhcCCCCCCCCCHHHHHH
Q 045568 305 KFIHIGLLCVQEDPADRPNMSSVAV 329 (379)
Q Consensus 305 ~~~~ial~Cv~~~p~~RPtM~~Vv~ 329 (379)
....+..+|++.+|.+||+|.+|++
T Consensus 240 ~~~~~~~~~L~~~P~~Rps~~eil~ 264 (793)
T PLN00181 240 KEASFCLWLLHPEPSCRPSMSELLQ 264 (793)
T ss_pred HHHHHHHHhCCCChhhCcChHHHhh
Confidence 3456667899999999999999975
No 213
>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and
Probab=24.95 E-value=62 Score=30.62 Aligned_cols=25 Identities=16% Similarity=0.053 Sum_probs=21.2
Q ss_pred HHHHHHhhcCCCCCCCCCHHHHHHH
Q 045568 306 FIHIGLLCVQEDPADRPNMSSVAVM 330 (379)
Q Consensus 306 ~~~ial~Cv~~~p~~RPtM~~Vv~~ 330 (379)
+..+-..|++.+|.+||++.+++..
T Consensus 265 ~~~li~~~l~~~P~~Rpt~~~ll~~ 289 (330)
T cd07834 265 AIDLLEKMLVFDPKKRITADEALAH 289 (330)
T ss_pred HHHHHHHHccCChhhCCCHHHHHhC
Confidence 4567778999999999999998864
No 214
>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=24.77 E-value=56 Score=30.60 Aligned_cols=24 Identities=17% Similarity=0.217 Sum_probs=19.9
Q ss_pred HHHHHHhhcCCCCCCCCCHHHHHH
Q 045568 306 FIHIGLLCVQEDPADRPNMSSVAV 329 (379)
Q Consensus 306 ~~~ial~Cv~~~p~~RPtM~~Vv~ 329 (379)
+..+...|.+.+|.+||++.+++.
T Consensus 245 ~~~li~~~l~~dp~~Rpt~~~il~ 268 (296)
T cd06655 245 FRDFLNRCLEMDVEKRGSAKELLQ 268 (296)
T ss_pred HHHHHHHHhhcChhhCCCHHHHhh
Confidence 445567899999999999999875
No 215
>PTZ00024 cyclin-dependent protein kinase; Provisional
Probab=24.66 E-value=62 Score=30.79 Aligned_cols=26 Identities=12% Similarity=0.080 Sum_probs=21.8
Q ss_pred HHHHHHHhhcCCCCCCCCCHHHHHHH
Q 045568 305 KFIHIGLLCVQEDPADRPNMSSVAVM 330 (379)
Q Consensus 305 ~~~~ial~Cv~~~p~~RPtM~~Vv~~ 330 (379)
.+.++...|++.+|.+||++.+|+..
T Consensus 288 ~~~~li~~~l~~~P~~R~s~~~~l~~ 313 (335)
T PTZ00024 288 DAIDLLQSLLKLNPLERISAKEALKH 313 (335)
T ss_pred HHHHHHHHHcCCCchhccCHHHHhcC
Confidence 35567788999999999999999864
No 216
>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes
Probab=24.60 E-value=62 Score=29.78 Aligned_cols=24 Identities=13% Similarity=0.120 Sum_probs=20.2
Q ss_pred HHHHHHhhcCCCCCCCCCHHHHHH
Q 045568 306 FIHIGLLCVQEDPADRPNMSSVAV 329 (379)
Q Consensus 306 ~~~ial~Cv~~~p~~RPtM~~Vv~ 329 (379)
+..+-..|++.+|.+||++.++++
T Consensus 260 ~~dll~~~L~~~P~~R~s~~~~l~ 283 (287)
T cd07848 260 LLDLMKNLLKLNPTDRYLTEQCLN 283 (287)
T ss_pred HHHHHHHHccCCcccCCCHHHHhc
Confidence 566777899999999999988764
No 217
>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their
Probab=23.94 E-value=65 Score=29.14 Aligned_cols=25 Identities=24% Similarity=0.494 Sum_probs=20.8
Q ss_pred HHHHHHHhhcCCCCCCCCCHHHHHH
Q 045568 305 KFIHIGLLCVQEDPADRPNMSSVAV 329 (379)
Q Consensus 305 ~~~~ial~Cv~~~p~~RPtM~~Vv~ 329 (379)
.+..+...|++.+|.+||+..+++.
T Consensus 239 ~~~~~i~~~l~~~p~~R~~~~~ll~ 263 (268)
T cd06630 239 GLRDVTLRCLELQPEDRPPSRELLK 263 (268)
T ss_pred HHHHHHHHHcCCCcccCcCHHHHhc
Confidence 4556778899999999999988763
No 218
>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=23.68 E-value=73 Score=29.31 Aligned_cols=24 Identities=17% Similarity=0.301 Sum_probs=20.0
Q ss_pred HHHHHHhhcCCCCCCCCCHHHHHH
Q 045568 306 FIHIGLLCVQEDPADRPNMSSVAV 329 (379)
Q Consensus 306 ~~~ial~Cv~~~p~~RPtM~~Vv~ 329 (379)
+..+...|.+.+|.+||++.+++.
T Consensus 238 ~~~li~~~l~~~p~~Rp~~~~l~~ 261 (286)
T cd06622 238 AQDFVAKCLNKIPNRRPTYAQLLE 261 (286)
T ss_pred HHHHHHHHcccCcccCCCHHHHhc
Confidence 445667899999999999998875
No 219
>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6. Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs
Probab=23.53 E-value=62 Score=29.61 Aligned_cols=24 Identities=21% Similarity=0.433 Sum_probs=20.2
Q ss_pred HHHHHHhhcCCCCCCCCCHHHHHH
Q 045568 306 FIHIGLLCVQEDPADRPNMSSVAV 329 (379)
Q Consensus 306 ~~~ial~Cv~~~p~~RPtM~~Vv~ 329 (379)
+..+...|.+.+|.+||++.+++.
T Consensus 237 l~~li~~~l~~~p~~Rp~~~~il~ 260 (283)
T cd06617 237 FQDFVNKCLKKNYKERPNYPELLQ 260 (283)
T ss_pred HHHHHHHHccCChhhCcCHHHHhc
Confidence 455667799999999999999875
No 220
>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea
Probab=23.52 E-value=63 Score=29.68 Aligned_cols=25 Identities=24% Similarity=0.364 Sum_probs=19.9
Q ss_pred HHHHHHHhhcCCCCCCCCCHHHHHH
Q 045568 305 KFIHIGLLCVQEDPADRPNMSSVAV 329 (379)
Q Consensus 305 ~~~~ial~Cv~~~p~~RPtM~~Vv~ 329 (379)
.+..+-..|.+.+|.+||+..++++
T Consensus 254 ~~~~li~~cl~~~p~~Rp~~~ell~ 278 (282)
T cd06636 254 KFIDFIEGCLVKNYLSRPSTEQLLK 278 (282)
T ss_pred HHHHHHHHHhCCChhhCcCHHHHhc
Confidence 3455666899999999999888754
No 221
>PHA03209 serine/threonine kinase US3; Provisional
Probab=23.45 E-value=57 Score=31.63 Aligned_cols=21 Identities=19% Similarity=0.153 Sum_probs=17.9
Q ss_pred HHHhhcCCCCCCCCCHHHHHH
Q 045568 309 IGLLCVQEDPADRPNMSSVAV 329 (379)
Q Consensus 309 ial~Cv~~~p~~RPtM~~Vv~ 329 (379)
+-..|++.+|.+||++.+|+.
T Consensus 330 li~~mL~~dP~~Rpta~e~l~ 350 (357)
T PHA03209 330 LVHKMLTFDAAMRPSAEEILN 350 (357)
T ss_pred HHHHHHcCCcccCcCHHHHhc
Confidence 455789999999999998864
No 222
>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl
Probab=23.34 E-value=62 Score=30.19 Aligned_cols=23 Identities=9% Similarity=-0.080 Sum_probs=19.5
Q ss_pred HHHHHhhcCCCCCCCCCHHHHHH
Q 045568 307 IHIGLLCVQEDPADRPNMSSVAV 329 (379)
Q Consensus 307 ~~ial~Cv~~~p~~RPtM~~Vv~ 329 (379)
..+-..|++.+|.+||++.+|+.
T Consensus 263 ~~li~~ml~~dp~~R~t~~eil~ 285 (301)
T cd07873 263 AELLSKLLQFEGRKRISAEEAMK 285 (301)
T ss_pred HHHHHHHhcCCcccCcCHHHHhc
Confidence 45667899999999999999875
No 223
>PF02950 Conotoxin: Conotoxin; InterPro: IPR004214 Cone snail toxins, conotoxins, are small neurotoxic peptides with disulphide connectivity that target ion-channels or G-protein coupled receptors. Based on the number and pattern of disulphide bonds and biological activities, conotoxins can be classified into several families []. Omega, delta and kappa families of conotoxins have a knottin or inhibitor cysteine knot scaffold. The knottin scaffold is a very special disulphide-through-disulphide knot, in which the III-VI disulphide bond crosses the macrocycle formed by two other disulphide bonds (I-IV and II-V) and the interconnecting backbone segments, where I-VI indicates the six cysteine residues starting from the N terminus. The disulphide bonding network, as well as specific amino acids in inter-cysteine loops, provide the specificity of conotoxins []. The cysteine arrangements are the same for omega, delta and kappa families, even though omega conotoxins are calcium channel blockers, whereas delta conotoxins delay the inactivation of sodium channels, and kappa conotoxins are potassium channel blockers []. Mu conotoxins have two types of cysteine arrangements, but the knottin scaffold is not observed. Mu conotoxins target the voltage-gated sodium channels [], and are useful probes for investigating voltage-dependent sodium channels of excitable tissues []. Alpha conotoxins have two types of cysteine arrangements [], and are competitive nicotinic acetylcholine receptor antagonists. ; GO: 0008200 ion channel inhibitor activity, 0009405 pathogenesis, 0005576 extracellular region; PDB: 2EFZ_A 1FYG_A 1RMK_A 1DG0_A 1DFY_A 1DFZ_A 2JQC_A 2YYF_A 2JQB_A 1F3K_A ....
Probab=22.92 E-value=28 Score=25.75 Aligned_cols=15 Identities=20% Similarity=0.377 Sum_probs=0.0
Q ss_pred CchHHHHHHHHHHHH
Q 045568 1 MNMNIILVFLSVLSF 15 (379)
Q Consensus 1 ~~~~~~~~~~~~~~~ 15 (379)
|+.+++|++++||+.
T Consensus 1 mKLt~vliVavLllt 15 (75)
T PF02950_consen 1 MKLTCVLIVAVLLLT 15 (75)
T ss_dssp ---------------
T ss_pred CCcchHHHHHHHHHH
Confidence 666666655555443
No 224
>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase. Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription
Probab=22.74 E-value=64 Score=31.37 Aligned_cols=26 Identities=15% Similarity=0.160 Sum_probs=21.5
Q ss_pred HHHHHHHhhcCCCCCCCCCHHHHHHH
Q 045568 305 KFIHIGLLCVQEDPADRPNMSSVAVM 330 (379)
Q Consensus 305 ~~~~ial~Cv~~~p~~RPtM~~Vv~~ 330 (379)
.+..+...|++.+|.+||++.+++..
T Consensus 263 ~~~~li~~mL~~dP~~R~t~~e~l~h 288 (372)
T cd07853 263 EAVHLLCRMLVFDPDKRISAADALAH 288 (372)
T ss_pred HHHHHHHHhCCCChhhCcCHHHHhcC
Confidence 34567778999999999999998753
No 225
>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as
Probab=21.92 E-value=73 Score=29.83 Aligned_cols=24 Identities=13% Similarity=0.066 Sum_probs=20.1
Q ss_pred HHHHHHhhcCCCCCCCCCHHHHHH
Q 045568 306 FIHIGLLCVQEDPADRPNMSSVAV 329 (379)
Q Consensus 306 ~~~ial~Cv~~~p~~RPtM~~Vv~ 329 (379)
+..+-..|++.+|.+||+..++++
T Consensus 290 ~~~ll~~~l~~dP~~R~t~~e~l~ 313 (317)
T cd07867 290 VFLLLQKLLTMDPTKRITSEQALQ 313 (317)
T ss_pred HHHHHHHHhccCcccccCHHHHhc
Confidence 555677899999999999998864
No 226
>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi
Probab=21.83 E-value=70 Score=30.68 Aligned_cols=25 Identities=12% Similarity=0.109 Sum_probs=21.0
Q ss_pred HHHHHHHhhcCCCCCCCCCHHHHHH
Q 045568 305 KFIHIGLLCVQEDPADRPNMSSVAV 329 (379)
Q Consensus 305 ~~~~ial~Cv~~~p~~RPtM~~Vv~ 329 (379)
.+..+...|.+.+|.+||+..+++.
T Consensus 275 ~~~~li~~~L~~dP~~R~t~~ell~ 299 (342)
T cd07854 275 EALDFLEQILTFNPMDRLTAEEALM 299 (342)
T ss_pred HHHHHHHHHhCCCchhccCHHHHhC
Confidence 3456778899999999999999874
No 227
>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10. Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing
Probab=21.47 E-value=1.3e+02 Score=28.19 Aligned_cols=23 Identities=13% Similarity=0.176 Sum_probs=19.3
Q ss_pred HHHHHhhcCCCCCCCCCHHHHHH
Q 045568 307 IHIGLLCVQEDPADRPNMSSVAV 329 (379)
Q Consensus 307 ~~ial~Cv~~~p~~RPtM~~Vv~ 329 (379)
..+-..|++.+|++||++.+++.
T Consensus 267 ~~li~~ml~~dp~~R~t~~~il~ 289 (309)
T cd07845 267 LRLLNFLLMYDPKKRATAEEALE 289 (309)
T ss_pred HHHHHHHhcCChhhCcCHHHHhc
Confidence 44557789999999999998875
No 228
>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express
Probab=20.67 E-value=81 Score=29.42 Aligned_cols=23 Identities=13% Similarity=0.151 Sum_probs=18.6
Q ss_pred HHHHhhcCCCCCCCCCHHHHHHH
Q 045568 308 HIGLLCVQEDPADRPNMSSVAVM 330 (379)
Q Consensus 308 ~ial~Cv~~~p~~RPtM~~Vv~~ 330 (379)
.+-..|.+.+|.+||++.++++.
T Consensus 250 ~li~~~l~~~P~~Rpt~~~il~~ 272 (292)
T cd06658 250 GFLDLMLVREPSQRATAQELLQH 272 (292)
T ss_pred HHHHHHccCChhHCcCHHHHhhC
Confidence 34456889999999999999864
Done!