Query 045569
Match_columns 362
No_of_seqs 198 out of 1542
Neff 10.1
Searched_HMMs 29240
Date Mon Mar 25 05:23:04 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/045569.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/045569hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ii7_A Kelch-like protein 7; p 99.4 1.7E-10 5.8E-15 102.4 25.0 220 93-336 40-279 (306)
2 1zgk_A Kelch-like ECH-associat 99.4 3.8E-10 1.3E-14 100.3 25.5 218 94-336 56-294 (308)
3 2xn4_A Kelch-like protein 2; s 99.4 5.9E-10 2E-14 98.7 26.0 218 94-336 47-283 (302)
4 2vpj_A Kelch-like protein 12; 99.4 5.3E-10 1.8E-14 98.9 25.4 217 95-336 49-285 (301)
5 4asc_A Kelch repeat and BTB do 99.3 6.1E-10 2.1E-14 99.2 24.7 196 119-336 68-284 (315)
6 2woz_A Kelch repeat and BTB do 99.3 2.4E-09 8.3E-14 95.5 25.1 193 120-335 80-293 (318)
7 2uvk_A YJHT; unknown function, 99.2 7.2E-10 2.5E-14 100.5 20.3 226 95-336 6-301 (357)
8 2e31_A FBS1, F-box only protei 99.2 3.6E-12 1.2E-16 110.4 3.8 51 3-53 48-99 (297)
9 3ii7_A Kelch-like protein 7; p 99.2 4E-09 1.4E-13 93.4 22.4 194 117-336 23-232 (306)
10 4asc_A Kelch repeat and BTB do 99.2 6.2E-09 2.1E-13 92.6 22.6 199 119-336 14-228 (315)
11 1fs1_A SKP2 F-BOX, cyclin A/CD 99.2 1.1E-11 3.7E-16 79.2 2.8 44 4-47 7-50 (53)
12 2vpj_A Kelch-like protein 12; 99.2 1.5E-08 5E-13 89.5 24.0 193 119-336 32-238 (301)
13 2xn4_A Kelch-like protein 2; s 99.1 1.4E-08 4.6E-13 89.8 22.9 194 118-336 30-236 (302)
14 1zgk_A Kelch-like ECH-associat 99.1 9.2E-09 3.1E-13 91.3 19.8 198 118-336 39-247 (308)
15 2woz_A Kelch repeat and BTB do 99.0 2.9E-08 1E-12 88.4 20.1 208 109-336 16-238 (318)
16 2ovr_B FBW7, F-BOX/WD repeat p 99.0 2.2E-07 7.6E-12 86.5 25.2 282 4-333 17-312 (445)
17 2zwa_A Leucine carboxyl methyl 99.0 3.1E-08 1.1E-12 97.7 19.6 212 107-338 396-644 (695)
18 2uvk_A YJHT; unknown function, 99.0 2.3E-07 7.8E-12 83.9 23.2 226 93-336 49-349 (357)
19 3v7d_B Cell division control p 98.8 1.5E-06 5.1E-11 81.2 24.5 46 5-50 14-60 (464)
20 1p22_A F-BOX/WD-repeat protein 98.7 1.4E-06 5E-11 80.7 20.6 287 5-333 10-329 (435)
21 1k3i_A Galactose oxidase precu 98.5 6.3E-06 2.1E-10 80.8 18.2 195 119-336 220-504 (656)
22 2zwa_A Leucine carboxyl methyl 98.2 2E-05 6.9E-10 77.7 14.4 153 181-337 411-591 (695)
23 3l2o_B F-box only protein 4; s 98.1 9.2E-07 3.1E-11 75.7 1.5 50 6-55 5-54 (312)
24 1k3i_A Galactose oxidase precu 98.0 6.8E-05 2.3E-09 73.5 14.8 197 120-334 168-383 (656)
25 2ast_B S-phase kinase-associat 97.6 1.4E-05 4.8E-10 71.4 2.0 42 4-45 7-48 (336)
26 2p1m_B Transport inhibitor res 97.5 2.5E-05 8.6E-10 75.4 1.2 39 1-39 1-40 (594)
27 3ogk_B Coronatine-insensitive 96.5 0.00067 2.3E-08 65.3 1.3 33 7-39 14-47 (592)
28 3jrp_A Fusion protein of prote 95.5 1.2 4E-05 39.0 18.9 138 183-331 80-242 (379)
29 2z2n_A Virginiamycin B lyase; 95.0 1.4 4.9E-05 37.1 20.6 189 106-333 107-299 (299)
30 3jro_A Fusion protein of prote 94.7 2.1 7.1E-05 42.3 18.7 192 111-331 24-240 (753)
31 3g4e_A Regucalcin; six bladed 94.4 2.2 7.4E-05 36.5 17.7 197 108-338 24-239 (297)
32 1q7f_A NHL, brain tumor CG1071 93.9 2.5 8.6E-05 35.5 20.3 201 106-337 38-246 (286)
33 4gqb_B Methylosome protein 50; 92.2 5.7 0.00019 34.8 17.3 198 106-335 91-295 (344)
34 4gga_A P55CDC, cell division c 92.0 6.5 0.00022 35.2 20.9 195 106-334 114-315 (420)
35 3ei3_B DNA damage-binding prot 91.8 6.3 0.00022 34.6 19.1 192 110-332 88-285 (383)
36 3mbr_X Glutamine cyclotransfer 91.3 5.7 0.00019 33.1 14.4 113 214-337 27-142 (243)
37 3dsm_A Uncharacterized protein 91.3 6.7 0.00023 33.9 24.6 198 108-337 2-221 (328)
38 3e5z_A Putative gluconolactona 91.1 6.2 0.00021 33.3 21.7 197 110-337 42-254 (296)
39 1l0q_A Surface layer protein; 90.9 7.8 0.00027 34.0 17.0 190 108-334 85-280 (391)
40 1l0q_A Surface layer protein; 90.6 8.4 0.00029 33.8 18.9 186 109-334 2-194 (391)
41 1q7f_A NHL, brain tumor CG1071 90.3 7.2 0.00025 32.6 22.1 188 107-329 87-280 (286)
42 3u4y_A Uncharacterized protein 90.0 8.4 0.00029 32.8 17.1 188 108-332 9-210 (331)
43 3q7m_A Lipoprotein YFGL, BAMB; 89.9 8 0.00027 34.0 14.3 111 211-334 97-212 (376)
44 3dsm_A Uncharacterized protein 89.7 9.3 0.00032 33.0 22.2 194 107-333 52-257 (328)
45 3nol_A Glutamine cyclotransfer 89.6 8.4 0.00029 32.4 13.7 113 214-337 49-164 (262)
46 1rwi_B Serine/threonine-protei 89.2 8.3 0.00028 31.7 18.5 186 106-332 75-267 (270)
47 4e54_B DNA damage-binding prot 89.1 4.6 0.00016 36.5 12.2 192 108-332 131-330 (435)
48 4g56_B MGC81050 protein; prote 88.9 11 0.00039 32.9 16.4 194 107-334 104-306 (357)
49 3q7m_A Lipoprotein YFGL, BAMB; 88.6 11 0.00038 33.0 14.2 111 211-334 47-167 (376)
50 3no2_A Uncharacterized protein 88.2 11 0.00037 31.8 15.7 185 109-333 6-199 (276)
51 4aez_A CDC20, WD repeat-contai 88.1 14 0.00046 32.8 21.3 189 108-333 103-297 (401)
52 3dwl_C Actin-related protein 2 87.6 12 0.00042 32.5 13.8 185 115-332 30-239 (377)
53 2qc5_A Streptogramin B lactona 87.4 11 0.00039 31.2 18.3 183 107-328 113-299 (300)
54 3bws_A Protein LP49; two-domai 86.9 16 0.00055 32.4 16.6 191 106-334 178-395 (433)
55 4e54_B DNA damage-binding prot 86.9 17 0.00058 32.6 18.3 56 276-333 377-434 (435)
56 3hfq_A Uncharacterized protein 86.0 7.3 0.00025 33.6 11.2 103 231-334 17-123 (347)
57 2z2n_A Virginiamycin B lyase; 85.1 15 0.00052 30.5 20.4 196 103-337 62-262 (299)
58 3e5z_A Putative gluconolactona 84.4 17 0.00059 30.4 16.7 202 103-334 74-291 (296)
59 3hfq_A Uncharacterized protein 84.2 19 0.00066 30.9 20.5 164 150-336 143-326 (347)
60 2pm9_A Protein WEB1, protein t 84.1 21 0.00073 31.3 16.4 96 233-332 241-340 (416)
61 1ri6_A Putative isomerase YBHE 83.3 20 0.00068 30.4 19.6 145 183-336 152-317 (343)
62 1p22_A F-BOX/WD-repeat protein 83.3 25 0.00085 31.4 17.8 109 213-333 301-418 (435)
63 4aez_A CDC20, WD repeat-contai 82.8 24 0.00084 31.1 21.4 99 231-333 283-384 (401)
64 3fm0_A Protein CIAO1; WDR39,SG 82.8 22 0.00077 30.6 18.9 184 115-327 35-223 (345)
65 2qc5_A Streptogramin B lactona 82.7 19 0.00066 29.8 19.8 193 103-335 25-223 (300)
66 3bws_A Protein LP49; two-domai 82.7 25 0.00086 31.1 16.3 193 108-334 133-339 (433)
67 3hrp_A Uncharacterized protein 82.6 11 0.00038 33.9 11.1 109 216-335 140-255 (409)
68 1npe_A Nidogen, entactin; glyc 82.5 19 0.00066 29.7 19.1 192 107-336 46-246 (267)
69 2dg1_A DRP35, lactonase; beta 82.1 19 0.00066 30.6 12.2 114 216-335 54-177 (333)
70 3scy_A Hypothetical bacterial 82.0 24 0.00083 30.4 21.5 113 217-336 221-346 (361)
71 2iwa_A Glutamine cyclotransfer 82.0 22 0.00075 29.9 14.5 110 218-337 32-144 (266)
72 1k8k_C P40, ARP2/3 complex 41 82.0 23 0.00079 30.4 12.8 97 232-331 30-129 (372)
73 3bg1_A Protein SEC13 homolog; 81.5 24 0.00081 30.0 14.9 55 275-329 187-247 (316)
74 1rwi_B Serine/threonine-protei 81.5 20 0.0007 29.2 18.7 193 102-335 28-228 (270)
75 3v9f_A Two-component system se 81.0 44 0.0015 32.8 18.5 141 183-336 470-618 (781)
76 3nok_A Glutaminyl cyclase; bet 81.0 22 0.00074 30.0 11.3 109 215-337 62-173 (268)
77 3v65_B Low-density lipoprotein 80.3 31 0.0011 30.6 16.3 192 107-336 126-326 (386)
78 1ri6_A Putative isomerase YBHE 79.6 27 0.00092 29.5 17.0 137 183-333 61-215 (343)
79 3vgz_A Uncharacterized protein 78.6 30 0.001 29.4 24.9 201 107-334 99-308 (353)
80 1n7d_A LDL receptor, low-densi 78.6 15 0.00051 35.9 11.1 137 183-334 476-619 (699)
81 3g4e_A Regucalcin; six bladed 78.3 29 0.001 29.1 13.4 101 217-329 24-139 (297)
82 1gxr_A ESG1, transducin-like e 78.1 30 0.001 29.1 21.8 186 108-333 108-300 (337)
83 3v64_C Agrin; beta propeller, 77.9 35 0.0012 29.8 17.9 192 106-335 82-282 (349)
84 2hqs_A Protein TOLB; TOLB, PAL 77.4 39 0.0013 30.1 18.3 184 118-337 203-395 (415)
85 3mmy_A MRNA export factor; mRN 77.0 32 0.0011 29.3 12.1 69 265-335 54-123 (368)
86 1pjx_A Dfpase, DIISOPROPYLFLUO 76.9 32 0.0011 28.8 19.2 194 116-336 44-264 (314)
87 1yfq_A Cell cycle arrest prote 75.9 35 0.0012 28.8 18.9 189 110-333 71-286 (342)
88 2ojh_A Uncharacterized protein 75.3 32 0.0011 28.0 18.4 199 106-336 50-265 (297)
89 1kv9_A Type II quinohemoprotei 75.3 37 0.0013 32.7 12.9 114 211-334 60-192 (668)
90 3sjl_D Methylamine dehydrogena 75.2 43 0.0015 29.9 12.3 118 216-339 236-374 (386)
91 3dwl_C Actin-related protein 2 75.1 9.3 0.00032 33.3 8.0 137 183-330 34-178 (377)
92 2be1_A Serine/threonine-protei 75.0 11 0.00037 33.2 8.1 115 107-245 9-134 (339)
93 3k26_A Polycomb protein EED; W 74.7 39 0.0013 28.7 18.1 63 265-329 299-366 (366)
94 3mmy_A MRNA export factor; mRN 74.7 39 0.0013 28.7 18.1 189 108-333 97-308 (368)
95 4gga_A P55CDC, cell division c 74.5 45 0.0015 29.5 12.6 87 244-333 94-182 (420)
96 2fp8_A Strictosidine synthase; 73.4 42 0.0014 28.5 12.4 53 232-286 260-313 (322)
97 2ad6_A Methanol dehydrogenase 73.0 38 0.0013 31.9 12.1 113 211-334 56-190 (571)
98 3jro_A Fusion protein of prote 72.4 75 0.0026 31.0 16.3 97 232-331 31-134 (753)
99 1r5m_A SIR4-interacting protei 72.3 49 0.0017 28.8 18.7 186 106-328 215-424 (425)
100 3mbr_X Glutamine cyclotransfer 72.2 41 0.0014 27.9 15.4 137 182-337 43-188 (243)
101 3jrp_A Fusion protein of prote 71.6 47 0.0016 28.3 17.3 96 233-331 34-136 (379)
102 3v65_B Low-density lipoprotein 71.0 55 0.0019 28.9 20.7 186 108-334 87-282 (386)
103 2mad_H Methylamine dehydrogena 71.0 55 0.0019 28.8 12.7 70 264-334 278-355 (373)
104 2aq5_A Coronin-1A; WD40 repeat 70.9 54 0.0018 28.7 22.5 201 108-336 93-308 (402)
105 1kb0_A Quinohemoprotein alcoho 70.9 32 0.0011 33.3 11.2 114 211-334 71-204 (677)
106 1yiq_A Quinohemoprotein alcoho 70.6 48 0.0016 32.1 12.4 114 211-334 64-197 (689)
107 4g56_B MGC81050 protein; prote 70.1 54 0.0018 28.4 17.2 188 106-330 148-344 (357)
108 3odt_A Protein DOA1; ubiquitin 69.9 46 0.0016 27.5 23.4 188 106-333 27-218 (313)
109 2aq5_A Coronin-1A; WD40 repeat 69.9 57 0.0019 28.5 23.0 95 232-331 154-256 (402)
110 2ghs_A AGR_C_1268P; regucalcin 69.4 53 0.0018 28.0 13.2 104 218-335 61-174 (326)
111 3m0c_C LDL receptor, low-densi 69.4 72 0.0025 31.5 13.4 66 211-285 560-629 (791)
112 3m0c_C LDL receptor, low-densi 69.3 92 0.0032 30.8 20.3 156 150-333 473-636 (791)
113 3nol_A Glutamine cyclotransfer 69.1 50 0.0017 27.7 15.0 136 182-337 65-210 (262)
114 2fp8_A Strictosidine synthase; 69.0 53 0.0018 27.9 16.4 93 232-337 165-277 (322)
115 1nir_A Nitrite reductase; hemo 68.9 76 0.0026 29.6 18.4 113 217-333 334-462 (543)
116 3mkq_A Coatomer beta'-subunit; 68.1 91 0.0031 30.3 21.6 190 107-333 65-263 (814)
117 1k8k_C P40, ARP2/3 complex 41 67.4 58 0.002 27.7 21.6 189 113-333 25-237 (372)
118 2hqs_A Protein TOLB; TOLB, PAL 67.0 69 0.0024 28.5 18.6 185 118-336 159-351 (415)
119 4a11_B DNA excision repair pro 66.8 62 0.0021 27.9 16.8 191 110-333 114-327 (408)
120 3fm0_A Protein CIAO1; WDR39,SG 66.5 62 0.0021 27.7 14.3 99 233-334 84-186 (345)
121 4aow_A Guanine nucleotide-bind 66.2 58 0.002 27.3 19.0 92 232-331 237-339 (340)
122 2hes_X YDR267CP; beta-propelle 65.7 62 0.0021 27.5 11.4 71 264-336 118-191 (330)
123 3vl1_A 26S proteasome regulato 64.8 71 0.0024 27.9 18.5 94 232-329 313-419 (420)
124 3zwl_B Eukaryotic translation 64.3 65 0.0022 27.2 19.7 67 264-334 186-254 (369)
125 3u4y_A Uncharacterized protein 63.9 65 0.0022 27.0 19.0 182 119-336 109-311 (331)
126 2hz6_A Endoplasmic reticulum t 62.9 31 0.0011 30.3 8.7 100 216-334 91-197 (369)
127 3k26_A Polycomb protein EED; W 62.6 70 0.0024 27.0 17.2 66 265-332 241-321 (366)
128 3f3f_A Nucleoporin SEH1; struc 62.1 68 0.0023 26.7 14.4 65 265-331 71-145 (351)
129 4gqb_B Methylosome protein 50; 62.1 77 0.0026 27.3 17.2 189 106-332 136-334 (344)
130 3fvz_A Peptidyl-glycine alpha- 61.9 74 0.0025 27.0 20.7 205 107-330 100-323 (329)
131 4hw6_A Hypothetical protein, I 61.1 86 0.003 28.2 11.5 113 211-332 141-262 (433)
132 1gxr_A ESG1, transducin-like e 61.1 71 0.0024 26.6 24.6 196 106-335 60-261 (337)
133 2xyi_A Probable histone-bindin 60.4 92 0.0031 27.6 16.1 193 110-333 196-414 (430)
134 3tc9_A Hypothetical hydrolase; 60.1 97 0.0033 27.8 12.5 114 211-333 139-261 (430)
135 2bkl_A Prolyl endopeptidase; m 60.1 1.2E+02 0.0042 29.0 20.3 190 119-336 203-404 (695)
136 4ggc_A P55CDC, cell division c 59.7 73 0.0025 26.3 20.3 67 106-193 34-100 (318)
137 3scy_A Hypothetical bacterial 59.2 84 0.0029 26.8 18.4 191 120-336 31-249 (361)
138 4a11_B DNA excision repair pro 59.2 87 0.003 26.9 19.7 96 232-332 267-368 (408)
139 2ojh_A Uncharacterized protein 59.0 70 0.0024 25.8 19.3 184 117-336 21-213 (297)
140 3v64_C Agrin; beta propeller, 58.4 92 0.0031 27.0 20.8 187 108-334 44-239 (349)
141 1ijq_A LDL receptor, low-densi 58.1 87 0.003 26.6 20.7 190 106-332 39-241 (316)
142 1flg_A Protein (quinoprotein e 58.0 1E+02 0.0036 29.0 11.8 114 211-334 62-198 (582)
143 2oiz_A Aromatic amine dehydrog 57.5 95 0.0033 26.9 12.2 71 264-336 265-341 (361)
144 2kwv_A RAD30 homolog B, DNA po 57.0 5.5 0.00019 23.2 1.6 20 3-22 18-37 (48)
145 3ow8_A WD repeat-containing pr 57.0 89 0.0031 26.4 23.0 96 232-334 186-284 (321)
146 3nok_A Glutaminyl cyclase; bet 56.8 87 0.003 26.3 12.9 135 184-338 77-220 (268)
147 1ddw_A GLGF-domain protein hom 55.1 23 0.00077 25.8 5.1 39 119-168 12-51 (120)
148 2dg1_A DRP35, lactonase; beta 54.6 96 0.0033 26.0 20.5 202 107-336 54-270 (333)
149 2ovr_B FBW7, F-BOX/WD repeat p 54.5 1.2E+02 0.0039 26.9 22.7 111 213-330 324-443 (445)
150 1nir_A Nitrite reductase; hemo 54.5 1.4E+02 0.0047 27.8 20.2 192 107-334 147-360 (543)
151 1jmx_B Amine dehydrogenase; ox 54.4 96 0.0033 26.0 12.1 108 217-331 10-136 (349)
152 2pm7_B Protein transport prote 54.0 94 0.0032 25.8 13.8 64 265-330 67-133 (297)
153 1npe_A Nidogen, entactin; glyc 53.5 90 0.0031 25.4 15.5 159 150-334 38-203 (267)
154 3dr2_A Exported gluconolactona 53.0 56 0.0019 27.4 8.4 109 217-336 55-185 (305)
155 1n7d_A LDL receptor, low-densi 52.5 98 0.0033 30.0 10.8 57 211-272 542-602 (699)
156 3fvz_A Peptidyl-glycine alpha- 52.4 1.1E+02 0.0037 26.0 19.4 190 119-334 70-282 (329)
157 2p4o_A Hypothetical protein; p 52.3 1E+02 0.0036 25.8 13.3 103 217-330 42-148 (306)
158 3dr2_A Exported gluconolactona 52.2 1E+02 0.0035 25.7 18.6 102 232-338 169-276 (305)
159 3ow8_A WD repeat-containing pr 52.2 1.1E+02 0.0037 25.9 11.0 66 265-332 48-114 (321)
160 3v9f_A Two-component system se 52.1 1.8E+02 0.006 28.4 21.3 140 183-335 334-484 (781)
161 3hxj_A Pyrrolo-quinoline quino 51.9 1E+02 0.0035 25.6 10.2 29 217-250 147-175 (330)
162 1ijq_A LDL receptor, low-densi 51.2 1.1E+02 0.0039 25.9 19.4 175 120-335 12-201 (316)
163 1r5m_A SIR4-interacting protei 51.0 1.2E+02 0.0041 26.1 22.1 96 232-334 227-324 (425)
164 1yr2_A Prolyl oligopeptidase; 51.0 1.8E+02 0.0061 28.1 15.2 112 217-335 327-447 (741)
165 3bg1_A Protein SEC13 homolog; 50.1 1.1E+02 0.0039 25.6 10.2 69 264-334 24-95 (316)
166 4ggc_A P55CDC, cell division c 50.0 1.1E+02 0.0036 25.2 14.3 59 276-334 44-103 (318)
167 3odt_A Protein DOA1; ubiquitin 48.9 1.1E+02 0.0037 25.0 20.3 95 232-334 205-301 (313)
168 3mkq_A Coatomer beta'-subunit; 48.0 2E+02 0.0068 27.8 20.8 182 111-332 28-220 (814)
169 3i2n_A WD repeat-containing pr 47.4 1.2E+02 0.0043 25.3 20.4 96 232-330 234-354 (357)
170 3p5b_L Low density lipoprotein 47.4 1.5E+02 0.0052 26.2 21.8 156 150-332 161-323 (400)
171 3iuj_A Prolyl endopeptidase; h 46.8 2E+02 0.0069 27.5 19.9 142 182-336 259-412 (693)
172 2hz6_A Endoplasmic reticulum t 46.0 3.5 0.00012 36.6 -0.6 28 211-243 3-30 (369)
173 1w6s_A Methanol dehydrogenase 46.0 1.6E+02 0.0053 28.0 10.9 112 211-334 56-196 (599)
174 1i2h_A PSD-ZIP45(homer-1C/VESL 46.0 36 0.0012 26.3 5.2 39 119-168 17-56 (168)
175 1evh_A WH1 domain, protein (ME 45.9 29 0.00099 24.8 4.4 41 119-168 12-52 (112)
176 2hes_X YDR267CP; beta-propelle 45.9 1.4E+02 0.0046 25.3 19.2 64 264-329 260-328 (330)
177 1yfq_A Cell cycle arrest prote 45.2 1.3E+02 0.0046 25.0 11.8 71 264-337 22-97 (342)
178 3frx_A Guanine nucleotide-bind 45.1 1.4E+02 0.0047 25.1 12.0 66 266-333 31-100 (319)
179 3vgz_A Uncharacterized protein 45.0 1.4E+02 0.0047 25.1 16.5 139 183-334 70-220 (353)
180 1sq9_A Antiviral protein SKI8; 44.9 1.5E+02 0.0051 25.4 17.3 196 104-331 129-397 (397)
181 2pm7_B Protein transport prote 44.8 1.3E+02 0.0045 24.8 22.4 64 265-330 170-239 (297)
182 2iwa_A Glutamine cyclotransfer 44.5 1.4E+02 0.0047 24.9 18.7 137 182-337 44-190 (266)
183 3lrv_A PRE-mRNA-splicing facto 44.4 1.4E+02 0.0049 25.1 18.2 199 102-334 88-299 (343)
184 3lrv_A PRE-mRNA-splicing facto 44.0 1.5E+02 0.005 25.1 11.1 95 232-331 149-246 (343)
185 2ghs_A AGR_C_1268P; regucalcin 43.5 1.5E+02 0.0051 25.1 20.6 196 108-338 60-269 (326)
186 3p5b_L Low density lipoprotein 41.3 1.9E+02 0.0064 25.6 18.5 107 217-335 170-283 (400)
187 2ynn_A Coatomer subunit beta'; 41.2 1.5E+02 0.0052 24.5 21.5 67 264-334 197-264 (304)
188 3ei3_B DNA damage-binding prot 39.7 1.8E+02 0.0061 24.9 22.1 134 183-329 97-236 (383)
189 2z3z_A Dipeptidyl aminopeptida 39.3 2.6E+02 0.0087 26.5 18.3 189 118-331 235-437 (706)
190 3sov_A LRP-6, low-density lipo 38.8 1.8E+02 0.0062 24.7 20.5 133 183-332 102-241 (318)
191 1vyh_C Platelet-activating fac 38.6 2E+02 0.0069 25.1 22.6 64 265-332 308-372 (410)
192 3no2_A Uncharacterized protein 38.1 1.7E+02 0.0058 24.1 14.3 139 182-336 15-162 (276)
193 3dm0_A Maltose-binding peripla 38.1 2.7E+02 0.0092 26.4 12.1 66 266-333 396-465 (694)
194 3f3f_A Nucleoporin SEH1; struc 36.7 1.8E+02 0.006 23.9 22.1 32 305-336 312-345 (351)
195 4aow_A Guanine nucleotide-bind 36.4 1.8E+02 0.0062 24.0 19.0 57 275-333 193-250 (340)
196 3vl1_A 26S proteasome regulato 36.0 2.1E+02 0.0073 24.6 23.2 188 107-331 107-324 (420)
197 4ery_A WD repeat-containing pr 36.0 1.8E+02 0.0062 23.9 20.0 185 110-333 79-272 (312)
198 3v7d_B Cell division control p 35.7 2.3E+02 0.0078 25.0 23.8 193 106-331 171-383 (464)
199 3sfz_A APAF-1, apoptotic pepti 35.5 3.8E+02 0.013 27.5 20.9 191 106-334 624-833 (1249)
200 1qks_A Cytochrome CD1 nitrite 34.6 2.9E+02 0.01 25.8 20.7 191 108-334 166-378 (567)
201 3azo_A Aminopeptidase; POP fam 34.5 2.9E+02 0.01 25.8 19.4 191 118-336 161-376 (662)
202 2ynn_A Coatomer subunit beta'; 34.4 2E+02 0.0067 23.8 11.9 65 264-332 24-89 (304)
203 1egx_A VAsp, vasodilator-stimu 33.8 52 0.0018 23.6 4.2 42 119-168 12-53 (115)
204 3hrp_A Uncharacterized protein 33.0 2.6E+02 0.0088 24.7 22.0 201 101-336 134-361 (409)
205 3dm0_A Maltose-binding peripla 32.9 3.2E+02 0.011 25.9 19.7 92 232-328 583-692 (694)
206 2pbi_B Guanine nucleotide-bind 32.2 2.4E+02 0.008 24.0 20.1 181 110-326 168-354 (354)
207 1erj_A Transcriptional repress 32.1 2.5E+02 0.0085 24.3 23.7 193 106-333 132-345 (393)
208 3i2n_A WD repeat-containing pr 31.9 2.2E+02 0.0076 23.6 19.2 95 232-331 139-245 (357)
209 1pby_B Quinohemoprotein amine 31.2 2.2E+02 0.0075 23.4 14.4 109 217-333 44-167 (337)
210 1pby_B Quinohemoprotein amine 31.1 2.2E+02 0.0075 23.4 12.6 101 231-333 10-128 (337)
211 3sov_A LRP-6, low-density lipo 30.7 2.5E+02 0.0085 23.8 12.0 118 103-250 128-248 (318)
212 3gre_A Serine/threonine-protei 30.6 2.4E+02 0.0082 24.6 9.2 66 264-333 181-249 (437)
213 2vdu_B TRNA (guanine-N(7)-)-me 30.6 2.8E+02 0.0096 24.4 20.6 206 102-335 9-277 (450)
214 2lh0_A Histone chaperone RTT10 29.9 27 0.00093 22.5 1.8 33 1-33 3-38 (70)
215 4h5i_A Guanine nucleotide-exch 29.5 2.7E+02 0.0092 23.9 15.3 101 233-333 198-304 (365)
216 2xzm_R RACK1; ribosome, transl 29.3 2.6E+02 0.0087 23.5 13.1 68 264-333 38-111 (343)
217 1k32_A Tricorn protease; prote 29.0 4.6E+02 0.016 26.4 13.4 34 304-337 612-647 (1045)
218 1got_B GT-beta; complex (GTP-b 28.9 2.6E+02 0.0089 23.5 21.0 95 232-333 206-305 (340)
219 2dk7_A Transcription elongatio 28.3 52 0.0018 21.4 3.0 19 314-332 24-42 (73)
220 2ecf_A Dipeptidyl peptidase IV 28.0 4E+02 0.014 25.3 15.6 196 119-335 264-465 (741)
221 3sre_A PON1, serum paraoxonase 27.8 3.1E+02 0.01 23.9 14.6 205 108-336 60-308 (355)
222 3hxj_A Pyrrolo-quinoline quino 27.5 2.6E+02 0.0089 23.0 9.8 19 108-126 107-125 (330)
223 2xbg_A YCF48-like protein; pho 27.4 2.8E+02 0.0096 23.4 15.6 138 183-336 14-158 (327)
224 3c5m_A Oligogalacturonate lyas 26.6 2.9E+02 0.01 23.4 11.3 143 182-336 168-336 (396)
225 2ymu_A WD-40 repeat protein; u 26.3 3.7E+02 0.013 24.4 21.6 97 232-336 407-505 (577)
226 2xdw_A Prolyl endopeptidase; a 25.3 4.5E+02 0.015 25.0 21.9 138 182-331 259-416 (710)
227 2qe8_A Uncharacterized protein 24.3 3.2E+02 0.011 23.1 10.0 76 211-286 69-154 (343)
228 2ymu_A WD-40 repeat protein; u 24.1 4E+02 0.014 24.1 20.7 96 232-335 448-545 (577)
229 2lyd_A Decapping protein 1; DC 24.1 1.6E+02 0.0055 21.6 5.5 28 312-339 30-57 (134)
230 4a0p_A LRP6, LRP-6, low-densit 24.1 4.7E+02 0.016 24.8 19.7 186 106-332 46-240 (628)
231 1flg_A Protein (quinoprotein e 23.9 4.5E+02 0.015 24.6 10.2 79 183-273 467-548 (582)
232 2jp2_A Spred-2, sprouty-relate 23.4 76 0.0026 23.2 3.5 42 119-168 21-65 (126)
233 1got_B GT-beta; complex (GTP-b 23.4 3.3E+02 0.011 22.8 21.5 94 232-332 164-260 (340)
234 1jmx_B Amine dehydrogenase; ox 23.3 3.1E+02 0.011 22.6 9.9 67 264-333 10-78 (349)
235 4a2l_A BT_4663, two-component 23.1 5.2E+02 0.018 25.0 24.4 200 101-335 360-577 (795)
236 3s3x_D Psalmotoxin-1; acid-sen 22.7 34 0.0011 17.9 1.0 22 105-127 15-36 (37)
237 3s9j_A Member of DUF4221 famil 22.0 4.1E+02 0.014 23.3 11.1 81 259-339 32-120 (369)
238 4ery_A WD repeat-containing pr 21.5 3.3E+02 0.011 22.2 21.3 93 232-328 214-311 (312)
239 3c75_H MADH, methylamine dehyd 21.3 4.4E+02 0.015 23.5 12.3 69 264-333 330-406 (426)
240 1w6s_A Methanol dehydrogenase 20.6 5.4E+02 0.018 24.2 10.2 79 183-273 454-535 (599)
241 4a0p_A LRP6, LRP-6, low-densit 20.6 5.5E+02 0.019 24.3 22.1 154 150-333 39-201 (628)
242 1rmk_A MU-O-conotoxin mrvib; b 20.1 11 0.00039 19.4 -1.0 13 101-113 14-26 (31)
243 2xyi_A Probable histone-bindin 20.1 2.7E+02 0.0093 24.4 7.4 65 264-330 243-310 (430)
No 1
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=99.40 E-value=1.7e-10 Score=102.39 Aligned_cols=220 Identities=12% Similarity=0.045 Sum_probs=140.6
Q ss_pred cCCCCCccceEeeeeeeeEEEe-ec----CceEEEEeCCCcccccCCCCCcCCCCcccceeeeeeeeecCCCCCeEEEEE
Q 045569 93 QDLDNPVRGELVGPYNGIFCIF-GN----NNRITLWNRATKESRVLPKCTTVFPKYTSIFCKCTGFGLDPMSTDYKLVLI 167 (362)
Q Consensus 93 ~~~~~p~~~~~~~s~~GLl~~~-~~----~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~ 167 (362)
..++.+......+..+|.|++. +. ...+.++||.|++|..+|+.+.+.... ....++ -+++.+
T Consensus 40 ~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~-------~~~~~~-----~~iyv~ 107 (306)
T 3ii7_A 40 RCPFEKRRDAACVFWDNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPPTPRDSL-------AACAAE-----GKIYTS 107 (306)
T ss_dssp CCCSCCCBSCEEEEETTEEEEECCBSSSBCCEEEEEETTTTEEEEEECCSSCCBSC-------EEEEET-----TEEEEE
T ss_pred CCCCcccceeEEEEECCEEEEEeCCCCCCcceEEEEeCCCCeEEECCCCCccccce-------eEEEEC-----CEEEEE
Confidence 3344444444455567766655 32 346899999999999998876533221 111222 245555
Q ss_pred EEEeecccccccCcceEEEEECCCCCceecccCCCccccccCCcceEEECceEEEEeeccCCC-----ccEEEEEEcCCc
Q 045569 168 FTLWNEKLDLLYEFSHVAVYSLSTNSWRYCDCFKSNHYYMDGAFDSVYLDGVCYWLSEFRDND-----HKVILSFHLGNE 242 (362)
Q Consensus 168 ~~~~~~~~~~~~~~~~~eVyss~~~~W~~~~~~~~~~~~~~~~~~~v~~~G~lywl~~~~~~~-----~~~il~fD~~~e 242 (362)
+. ... .......+++|+..+++|+.+...+.+.. ....+.++|.+|.+....... ...+.+||+.++
T Consensus 108 GG-~~~---~~~~~~~~~~~d~~~~~W~~~~~~p~~r~----~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~ 179 (306)
T 3ii7_A 108 GG-SEV---GNSALYLFECYDTRTESWHTKPSMLTQRC----SHGMVEANGLIYVCGGSLGNNVSGRVLNSCEVYDPATE 179 (306)
T ss_dssp CC-BBT---TBSCCCCEEEEETTTTEEEEECCCSSCCB----SCEEEEETTEEEEECCEESCTTTCEECCCEEEEETTTT
T ss_pred CC-CCC---CCcEeeeEEEEeCCCCceEeCCCCcCCcc----eeEEEEECCEEEEECCCCCCCCcccccceEEEeCCCCC
Confidence 32 110 11223579999999999999876654332 256788999999998643221 356999999999
Q ss_pred eeeeec-CCCCCCCCCcEEEEECCeEEEEEEcCCC-CeEEEEEeeC--CeeEEEEEeCCCCCceeeEEEeeCCcEEEEec
Q 045569 243 VFEEIQ-EPYIPESTPTILGIYNHSLCLLLSHNIE-NYYDIWVMKY--KCWIKQLSLGPLNGVRTPLGFWKKGAFFVHST 318 (362)
Q Consensus 243 ~~~~i~-~P~~~~~~~~~l~~~~g~L~l~~~~~~~-~~~~IW~l~~--~~W~~~~~i~~~~~~~~~~~~~~~g~il~~~~ 318 (362)
+|+.++ +|..... ..++..+|+|++++..... ..-++|+++- ..|+.+..++.. ......+ .-+++|++..+
T Consensus 180 ~W~~~~~~p~~r~~--~~~~~~~~~i~v~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~-r~~~~~~-~~~~~i~v~GG 255 (306)
T 3ii7_A 180 TWTELCPMIEARKN--HGLVFVKDKIFAVGGQNGLGGLDNVEYYDIKLNEWKMVSPMPWK-GVTVKCA-AVGSIVYVLAG 255 (306)
T ss_dssp EEEEECCCSSCCBS--CEEEEETTEEEEECCEETTEEBCCEEEEETTTTEEEECCCCSCC-BSCCEEE-EETTEEEEEEC
T ss_pred eEEECCCccchhhc--ceEEEECCEEEEEeCCCCCCCCceEEEeeCCCCcEEECCCCCCC-ccceeEE-EECCEEEEEeC
Confidence 999884 4543322 4677789999998764221 1224666654 889987654432 1222223 33678888764
Q ss_pred ------CCeEEEEeCCCCcEEEee
Q 045569 319 ------NEQLLLYDPNTQEMRDLG 336 (362)
Q Consensus 319 ------~~~~~~yd~~~~~~~~v~ 336 (362)
...+..||+++++|+.+.
T Consensus 256 ~~~~~~~~~~~~yd~~~~~W~~~~ 279 (306)
T 3ii7_A 256 FQGVGRLGHILEYNTETDKWVANS 279 (306)
T ss_dssp BCSSSBCCEEEEEETTTTEEEEEE
T ss_pred cCCCeeeeeEEEEcCCCCeEEeCC
Confidence 256999999999999986
No 2
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=99.37 E-value=3.8e-10 Score=100.27 Aligned_cols=218 Identities=11% Similarity=0.128 Sum_probs=138.2
Q ss_pred CCCCCccceEeeeeeeeEEEe-ec---------CceEEEEeCCCcccccCCCCCcCCCCcccceeeeeeeeecCCCCCeE
Q 045569 94 DLDNPVRGELVGPYNGIFCIF-GN---------NNRITLWNRATKESRVLPKCTTVFPKYTSIFCKCTGFGLDPMSTDYK 163 (362)
Q Consensus 94 ~~~~p~~~~~~~s~~GLl~~~-~~---------~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~yk 163 (362)
.++.|......+..+|.|.+. +. ...++++||.|++|..+|+++.+.... ....++ =+
T Consensus 56 ~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~-------~~~~~~-----~~ 123 (308)
T 1zgk_A 56 DLQVPRSGLAGCVVGGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQWSPCAPMSVPRNRI-------GVGVID-----GH 123 (308)
T ss_dssp CCSSCCBSCEEEEETTEEEEECCEEEETTEEEECCCEEEEETTTTEEEECCCCSSCCBTC-------EEEEET-----TE
T ss_pred CCCcccccceEEEECCEEEEECCCcCCCCCCeecceEEEECCCCCeEeECCCCCcCcccc-------EEEEEC-----CE
Confidence 344443333444556666655 22 235899999999999998876543222 111122 14
Q ss_pred EEEEEEEeecccccccCcceEEEEECCCCCceecccCCCccccccCCcceEEECceEEEEeeccCC-CccEEEEEEcCCc
Q 045569 164 LVLIFTLWNEKLDLLYEFSHVAVYSLSTNSWRYCDCFKSNHYYMDGAFDSVYLDGVCYWLSEFRDN-DHKVILSFHLGNE 242 (362)
Q Consensus 164 Vv~~~~~~~~~~~~~~~~~~~eVyss~~~~W~~~~~~~~~~~~~~~~~~~v~~~G~lywl~~~~~~-~~~~il~fD~~~e 242 (362)
++.++.. ... .....+++|+..+++|+.+...+.+.. ....+.++|.+|.+...... ....+..||+.++
T Consensus 124 iyv~GG~-~~~----~~~~~~~~yd~~~~~W~~~~~~p~~r~----~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~ 194 (308)
T 1zgk_A 124 IYAVGGS-HGC----IHHNSVERYEPERDEWHLVAPMLTRRI----GVGVAVLNRLLYAVGGFDGTNRLNSAECYYPERN 194 (308)
T ss_dssp EEEECCE-ETT----EECCCEEEEETTTTEEEECCCCSSCCB----SCEEEEETTEEEEECCBCSSCBCCCEEEEETTTT
T ss_pred EEEEcCC-CCC----cccccEEEECCCCCeEeECCCCCcccc----ceEEEEECCEEEEEeCCCCCCcCceEEEEeCCCC
Confidence 5555321 111 113469999999999999876543332 25678889999999764321 1346999999999
Q ss_pred eeeeec-CCCCCCCCCcEEEEECCeEEEEEEcCC-CCeEEEEEeeC--CeeEEEEEeCCCCCceeeEEEeeCCcEEEEec
Q 045569 243 VFEEIQ-EPYIPESTPTILGIYNHSLCLLLSHNI-ENYYDIWVMKY--KCWIKQLSLGPLNGVRTPLGFWKKGAFFVHST 318 (362)
Q Consensus 243 ~~~~i~-~P~~~~~~~~~l~~~~g~L~l~~~~~~-~~~~~IW~l~~--~~W~~~~~i~~~~~~~~~~~~~~~g~il~~~~ 318 (362)
+|+.++ +|..... ...+..+|+|++++.... ...-++|+++- ..|+++..++... ..... +.-+++|++..+
T Consensus 195 ~W~~~~~~p~~r~~--~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r-~~~~~-~~~~~~i~v~GG 270 (308)
T 1zgk_A 195 EWRMITAMNTIRSG--AGVCVLHNCIYAAGGYDGQDQLNSVERYDVETETWTFVAPMKHRR-SALGI-TVHQGRIYVLGG 270 (308)
T ss_dssp EEEECCCCSSCCBS--CEEEEETTEEEEECCBCSSSBCCCEEEEETTTTEEEECCCCSSCC-BSCEE-EEETTEEEEECC
T ss_pred eEeeCCCCCCcccc--ceEEEECCEEEEEeCCCCCCccceEEEEeCCCCcEEECCCCCCCc-cceEE-EEECCEEEEEcC
Confidence 999874 4443222 456778999999987532 12345666654 8999876544321 12222 233678888753
Q ss_pred ------CCeEEEEeCCCCcEEEee
Q 045569 319 ------NEQLLLYDPNTQEMRDLG 336 (362)
Q Consensus 319 ------~~~~~~yd~~~~~~~~v~ 336 (362)
...+..||+++++|+++.
T Consensus 271 ~~~~~~~~~v~~yd~~~~~W~~~~ 294 (308)
T 1zgk_A 271 YDGHTFLDSVECYDPDTDTWSEVT 294 (308)
T ss_dssp BCSSCBCCEEEEEETTTTEEEEEE
T ss_pred cCCCcccceEEEEcCCCCEEeecC
Confidence 356999999999999885
No 3
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=99.36 E-value=5.9e-10 Score=98.66 Aligned_cols=218 Identities=11% Similarity=0.135 Sum_probs=138.5
Q ss_pred CCCCCccceEeeeeeeeEEEe-ec-----CceEEEEeCCCcccccCCCCCcCCCCcccceeeeeeeeecCCCCCeEEEEE
Q 045569 94 DLDNPVRGELVGPYNGIFCIF-GN-----NNRITLWNRATKESRVLPKCTTVFPKYTSIFCKCTGFGLDPMSTDYKLVLI 167 (362)
Q Consensus 94 ~~~~p~~~~~~~s~~GLl~~~-~~-----~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~ 167 (362)
.++.+....-.+..+|.|++. +. ...+.++||.|++|..+|+.+.+.... . ...++ + +++.+
T Consensus 47 ~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~------~-~~~~~---~--~iyv~ 114 (302)
T 2xn4_A 47 ELPSRRCRAGMVYMAGLVFAVGGFNGSLRVRTVDSYDPVKDQWTSVANMRDRRSTL------G-AAVLN---G--LLYAV 114 (302)
T ss_dssp CCSSCCBSCEEEEETTEEEEESCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBSC------E-EEEET---T--EEEEE
T ss_pred cCCcccccceEEEECCEEEEEeCcCCCccccceEEECCCCCceeeCCCCCccccce------E-EEEEC---C--EEEEE
Confidence 333333333344556666655 21 236899999999999999876543222 1 11122 1 45444
Q ss_pred EEEeecccccccCcceEEEEECCCCCceecccCCCccccccCCcceEEECceEEEEeeccCCC---ccEEEEEEcCCcee
Q 045569 168 FTLWNEKLDLLYEFSHVAVYSLSTNSWRYCDCFKSNHYYMDGAFDSVYLDGVCYWLSEFRDND---HKVILSFHLGNEVF 244 (362)
Q Consensus 168 ~~~~~~~~~~~~~~~~~eVyss~~~~W~~~~~~~~~~~~~~~~~~~v~~~G~lywl~~~~~~~---~~~il~fD~~~e~~ 244 (362)
+.. ... .....+++|+..+++|+.+...+.+.. ....+.++|.+|.+....... ...+.+||+.+++|
T Consensus 115 GG~-~~~----~~~~~~~~~d~~~~~W~~~~~~p~~r~----~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W 185 (302)
T 2xn4_A 115 GGF-DGS----TGLSSVEAYNIKSNEWFHVAPMNTRRS----SVGVGVVGGLLYAVGGYDVASRQCLSTVECYNATTNEW 185 (302)
T ss_dssp EEE-CSS----CEEEEEEEEETTTTEEEEECCCSSCCB----SCEEEEETTEEEEECCEETTTTEECCCEEEEETTTTEE
T ss_pred cCC-CCC----ccCceEEEEeCCCCeEeecCCCCCccc----CceEEEECCEEEEEeCCCCCCCccccEEEEEeCCCCcE
Confidence 421 111 113469999999999999876543322 256788999999997643221 34699999999999
Q ss_pred eee-cCCCCCCCCCcEEEEECCeEEEEEEcCCC-CeEEEEEeeC--CeeEEEEEeCCCCCceeeEEEeeCCcEEEEec--
Q 045569 245 EEI-QEPYIPESTPTILGIYNHSLCLLLSHNIE-NYYDIWVMKY--KCWIKQLSLGPLNGVRTPLGFWKKGAFFVHST-- 318 (362)
Q Consensus 245 ~~i-~~P~~~~~~~~~l~~~~g~L~l~~~~~~~-~~~~IW~l~~--~~W~~~~~i~~~~~~~~~~~~~~~g~il~~~~-- 318 (362)
+.+ ++|..... ..++..+|+|++++..... ..-++|+++- ..|+++..++... .....+ ..+++|++..+
T Consensus 186 ~~~~~~p~~r~~--~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r-~~~~~~-~~~~~i~v~GG~~ 261 (302)
T 2xn4_A 186 TYIAEMSTRRSG--AGVGVLNNLLYAVGGHDGPLVRKSVEVYDPTTNAWRQVADMNMCR-RNAGVC-AVNGLLYVVGGDD 261 (302)
T ss_dssp EEECCCSSCCBS--CEEEEETTEEEEECCBSSSSBCCCEEEEETTTTEEEEECCCSSCC-BSCEEE-EETTEEEEECCBC
T ss_pred EECCCCcccccc--ccEEEECCEEEEECCCCCCcccceEEEEeCCCCCEeeCCCCCCcc-ccCeEE-EECCEEEEECCcC
Confidence 988 44543322 4677889999999875321 1235666664 8999876554322 222233 33678888754
Q ss_pred ----CCeEEEEeCCCCcEEEee
Q 045569 319 ----NEQLLLYDPNTQEMRDLG 336 (362)
Q Consensus 319 ----~~~~~~yd~~~~~~~~v~ 336 (362)
...+..||+++++|+.+.
T Consensus 262 ~~~~~~~v~~yd~~~~~W~~~~ 283 (302)
T 2xn4_A 262 GSCNLASVEYYNPTTDKWTVVS 283 (302)
T ss_dssp SSSBCCCEEEEETTTTEEEECS
T ss_pred CCcccccEEEEcCCCCeEEECC
Confidence 235999999999999886
No 4
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=99.35 E-value=5.3e-10 Score=98.86 Aligned_cols=217 Identities=8% Similarity=0.075 Sum_probs=137.5
Q ss_pred CCCCccceEeeeeeeeEEEe-ec-----CceEEEEeCCCcc---cccCCCCCcCCCCcccceeeeeeeeecCCCCCeEEE
Q 045569 95 LDNPVRGELVGPYNGIFCIF-GN-----NNRITLWNRATKE---SRVLPKCTTVFPKYTSIFCKCTGFGLDPMSTDYKLV 165 (362)
Q Consensus 95 ~~~p~~~~~~~s~~GLl~~~-~~-----~~~~~V~NP~T~~---~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv 165 (362)
++.+......+..+|.|.+. +. ...++++||.|++ |..+++.+.+.... ....++ =+++
T Consensus 49 ~p~~r~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W~~~~~~p~~r~~~-------~~~~~~-----~~ly 116 (301)
T 2vpj_A 49 ITRKRRYVASVSLHDRIYVIGGYDGRSRLSSVECLDYTADEDGVWYSVAPMNVRRGLA-------GATTLG-----DMIY 116 (301)
T ss_dssp CSSCCBSCEEEEETTEEEEECCBCSSCBCCCEEEEETTCCTTCCCEEECCCSSCCBSC-------EEEEET-----TEEE
T ss_pred CChhhccccEEEECCEEEEEcCCCCCccCceEEEEECCCCCCCeeEECCCCCCCccce-------eEEEEC-----CEEE
Confidence 33343334444556666555 31 2469999999999 99998876543222 111222 1455
Q ss_pred EEEEEeecccccccCcceEEEEECCCCCceecccCCCccccccCCcceEEECceEEEEeeccCC-CccEEEEEEcCCcee
Q 045569 166 LIFTLWNEKLDLLYEFSHVAVYSLSTNSWRYCDCFKSNHYYMDGAFDSVYLDGVCYWLSEFRDN-DHKVILSFHLGNEVF 244 (362)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~eVyss~~~~W~~~~~~~~~~~~~~~~~~~v~~~G~lywl~~~~~~-~~~~il~fD~~~e~~ 244 (362)
.++.. .. ......+++|+..+++|+.+...+.+.. ....+.++|.+|.+...... ....+.+||+.+++|
T Consensus 117 v~GG~-~~----~~~~~~~~~~d~~~~~W~~~~~~p~~r~----~~~~~~~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W 187 (301)
T 2vpj_A 117 VSGGF-DG----SRRHTSMERYDPNIDQWSMLGDMQTARE----GAGLVVASGVIYCLGGYDGLNILNSVEKYDPHTGHW 187 (301)
T ss_dssp EECCB-CS----SCBCCEEEEEETTTTEEEEEEECSSCCB----SCEEEEETTEEEEECCBCSSCBCCCEEEEETTTTEE
T ss_pred EEccc-CC----CcccceEEEEcCCCCeEEECCCCCCCcc----cceEEEECCEEEEECCCCCCcccceEEEEeCCCCcE
Confidence 55311 11 1123579999999999999876543322 25678889999999754321 134699999999999
Q ss_pred eeec-CCCCCCCCCcEEEEECCeEEEEEEcCCCC-eEEEEEeeC--CeeEEEEEeCCCCCceeeEEEeeCCcEEEEecC-
Q 045569 245 EEIQ-EPYIPESTPTILGIYNHSLCLLLSHNIEN-YYDIWVMKY--KCWIKQLSLGPLNGVRTPLGFWKKGAFFVHSTN- 319 (362)
Q Consensus 245 ~~i~-~P~~~~~~~~~l~~~~g~L~l~~~~~~~~-~~~IW~l~~--~~W~~~~~i~~~~~~~~~~~~~~~g~il~~~~~- 319 (362)
+.++ +|..... ..++..+|+|++++...... .-++|+++- ..|.+...++.. ......+ .-+++|++..+.
T Consensus 188 ~~~~~~p~~r~~--~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~-r~~~~~~-~~~~~i~v~GG~~ 263 (301)
T 2vpj_A 188 TNVTPMATKRSG--AGVALLNDHIYVVGGFDGTAHLSSVEAYNIRTDSWTTVTSMTTP-RCYVGAT-VLRGRLYAIAGYD 263 (301)
T ss_dssp EEECCCSSCCBS--CEEEEETTEEEEECCBCSSSBCCCEEEEETTTTEEEEECCCSSC-CBSCEEE-EETTEEEEECCBC
T ss_pred EeCCCCCccccc--ceEEEECCEEEEEeCCCCCcccceEEEEeCCCCcEEECCCCCCc-ccceeEE-EECCEEEEEcCcC
Confidence 9883 4443322 46778899999998753221 234555554 899988655432 2222233 336788887541
Q ss_pred -----CeEEEEeCCCCcEEEee
Q 045569 320 -----EQLLLYDPNTQEMRDLG 336 (362)
Q Consensus 320 -----~~~~~yd~~~~~~~~v~ 336 (362)
..+..||+++++|+.+.
T Consensus 264 ~~~~~~~v~~yd~~~~~W~~~~ 285 (301)
T 2vpj_A 264 GNSLLSSIECYDPIIDSWEVVT 285 (301)
T ss_dssp SSSBEEEEEEEETTTTEEEEEE
T ss_pred CCcccccEEEEcCCCCeEEEcC
Confidence 46899999999999876
No 5
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=99.34 E-value=6.1e-10 Score=99.24 Aligned_cols=196 Identities=8% Similarity=-0.032 Sum_probs=128.3
Q ss_pred eEEEEeCCCcccccCCCCCcCCCCcccceeeeeeeeecCCCCCeEEEEEEEEeecccccccCcceEEEEECCCCCceecc
Q 045569 119 RITLWNRATKESRVLPKCTTVFPKYTSIFCKCTGFGLDPMSTDYKLVLIFTLWNEKLDLLYEFSHVAVYSLSTNSWRYCD 198 (362)
Q Consensus 119 ~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~eVyss~~~~W~~~~ 198 (362)
.++++||.|++|..+|+.+.+.... ....++ =+++.++..... ........+++|+..+++|+.+.
T Consensus 68 ~~~~~d~~~~~W~~~~~~p~~r~~~-------~~~~~~-----~~lyv~GG~~~~--~~~~~~~~~~~~d~~~~~W~~~~ 133 (315)
T 4asc_A 68 YFLQFDHLDSEWLGMPPLPSPRCLF-------GLGEAL-----NSIYVVGGREIK--DGERCLDSVMCYDRLSFKWGESD 133 (315)
T ss_dssp EEEEEETTTTEEEECCCBSSCEESC-------EEEEET-----TEEEEECCEESS--TTCCBCCCEEEEETTTTEEEECC
T ss_pred ceEEecCCCCeEEECCCCCcchhce-------eEEEEC-----CEEEEEeCCcCC--CCCcccceEEEECCCCCcEeECC
Confidence 4889999999999998876533221 111121 145555421110 01122457999999999999987
Q ss_pred cCCCccccccCCcceEEECceEEEEeecc--CCCccEEEEEEcCCceeeeec-CCCCCCCCCcEEEEECCeEEEEEEcCC
Q 045569 199 CFKSNHYYMDGAFDSVYLDGVCYWLSEFR--DNDHKVILSFHLGNEVFEEIQ-EPYIPESTPTILGIYNHSLCLLLSHNI 275 (362)
Q Consensus 199 ~~~~~~~~~~~~~~~v~~~G~lywl~~~~--~~~~~~il~fD~~~e~~~~i~-~P~~~~~~~~~l~~~~g~L~l~~~~~~ 275 (362)
..+.+.. ....+.++|.+|.+.... ......+.+||+.+++|+.++ +|..... ...+..+|+|++++....
T Consensus 134 ~~p~~r~----~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~--~~~~~~~~~iyv~GG~~~ 207 (315)
T 4asc_A 134 PLPYVVY----GHTVLSHMDLVYVIGGKGSDRKCLNKMCVYDPKKFEWKELAPMQTARSL--FGATVHDGRIIVAAGVTD 207 (315)
T ss_dssp CCSSCCB----SCEEEEETTEEEEECCBCTTSCBCCCEEEEETTTTEEEECCCCSSCCBS--CEEEEETTEEEEEEEECS
T ss_pred CCCCccc----ceeEEEECCEEEEEeCCCCCCcccceEEEEeCCCCeEEECCCCCCchhc--eEEEEECCEEEEEeccCC
Confidence 6554332 266788999999998652 112357999999999999874 5544322 467788999999998643
Q ss_pred C-CeEEEEEeeC--CeeEEEEEeCCCCCceeeEEEeeCCcEEEEecC---------------CeEEEEeCCCCcEEEee
Q 045569 276 E-NYYDIWVMKY--KCWIKQLSLGPLNGVRTPLGFWKKGAFFVHSTN---------------EQLLLYDPNTQEMRDLG 336 (362)
Q Consensus 276 ~-~~~~IW~l~~--~~W~~~~~i~~~~~~~~~~~~~~~g~il~~~~~---------------~~~~~yd~~~~~~~~v~ 336 (362)
. ..-++|+++- ..|+.+..++.. ......+ .-+++|++..+. ..+..||+++++|+.+.
T Consensus 208 ~~~~~~~~~yd~~~~~W~~~~~~p~~-r~~~~~~-~~~~~l~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~ 284 (315)
T 4asc_A 208 TGLTSSAEVYSITDNKWAPFEAFPQE-RSSLSLV-SLVGTLYAIGGFATLETESGELVPTELNDIWRYNEEEKKWEGVL 284 (315)
T ss_dssp SSEEEEEEEEETTTTEEEEECCCSSC-CBSCEEE-EETTEEEEEEEEEEEECTTSCEEEEEEEEEEEEETTTTEEEEEE
T ss_pred CCccceEEEEECCCCeEEECCCCCCc-ccceeEE-EECCEEEEECCccccCcCCccccccccCcEEEecCCCChhhhhc
Confidence 2 2346777765 899998654422 2222233 336778776531 34889999999999983
No 6
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=99.27 E-value=2.4e-09 Score=95.45 Aligned_cols=193 Identities=10% Similarity=0.092 Sum_probs=126.3
Q ss_pred EEEEeCCCcccccCCCCCcCCCCcccceeeeeeeeecCCCCCeEEEEEEEEeecccccccCcceEEEEECCCCCceeccc
Q 045569 120 ITLWNRATKESRVLPKCTTVFPKYTSIFCKCTGFGLDPMSTDYKLVLIFTLWNEKLDLLYEFSHVAVYSLSTNSWRYCDC 199 (362)
Q Consensus 120 ~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~eVyss~~~~W~~~~~ 199 (362)
++++||.|++|..+|+.+.+.... . ...++ =+++.++...... ......+++|+..+++|+.+..
T Consensus 80 ~~~~d~~~~~W~~~~~~p~~r~~~------~-~~~~~-----~~iyv~GG~~~~~---~~~~~~~~~yd~~~~~W~~~~~ 144 (318)
T 2woz_A 80 FFQLDNVSSEWVGLPPLPSARCLF------G-LGEVD-----DKIYVVAGKDLQT---EASLDSVLCYDPVAAKWSEVKN 144 (318)
T ss_dssp EEEEETTTTEEEECSCBSSCBCSC------E-EEEET-----TEEEEEEEEBTTT---CCEEEEEEEEETTTTEEEEECC
T ss_pred EEEEeCCCCcEEECCCCCcccccc------c-eEEEC-----CEEEEEcCccCCC---CcccceEEEEeCCCCCEeECCC
Confidence 889999999999998876643221 1 11122 1455554211111 1123579999999999999876
Q ss_pred CCCccccccCCcceEEECceEEEEeeccC--CCccEEEEEEcCCceeeeec-CCCCCCCCCcEEEEECCeEEEEEEcCCC
Q 045569 200 FKSNHYYMDGAFDSVYLDGVCYWLSEFRD--NDHKVILSFHLGNEVFEEIQ-EPYIPESTPTILGIYNHSLCLLLSHNIE 276 (362)
Q Consensus 200 ~~~~~~~~~~~~~~v~~~G~lywl~~~~~--~~~~~il~fD~~~e~~~~i~-~P~~~~~~~~~l~~~~g~L~l~~~~~~~ 276 (362)
.+.+.. ....+.++|.+|.+..... .....+.+||+.+++|+.++ +|..... ...+..+|+|++++.....
T Consensus 145 ~p~~r~----~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~--~~~~~~~~~iyv~GG~~~~ 218 (318)
T 2woz_A 145 LPIKVY----GHNVISHNGMIYCLGGKTDDKKCTNRVFIYNPKKGDWKDLAPMKTPRSM--FGVAIHKGKIVIAGGVTED 218 (318)
T ss_dssp CSSCEE----SCEEEEETTEEEEECCEESSSCBCCCEEEEETTTTEEEEECCCSSCCBS--CEEEEETTEEEEEEEEETT
T ss_pred CCCccc----ccEEEEECCEEEEEcCCCCCCCccceEEEEcCCCCEEEECCCCCCCccc--ceEEEECCEEEEEcCcCCC
Confidence 554332 2567789999999976421 12346999999999999884 4443322 4667889999999875322
Q ss_pred -CeEEEEEeeC--CeeEEEEEeCCCCCceeeEEEeeCCcEEEEec---------------CCeEEEEeCCCCcEEEe
Q 045569 277 -NYYDIWVMKY--KCWIKQLSLGPLNGVRTPLGFWKKGAFFVHST---------------NEQLLLYDPNTQEMRDL 335 (362)
Q Consensus 277 -~~~~IW~l~~--~~W~~~~~i~~~~~~~~~~~~~~~g~il~~~~---------------~~~~~~yd~~~~~~~~v 335 (362)
..-++|+++- ..|+++..++.. ....... ..+++|++..+ ...+..||+++++|+++
T Consensus 219 ~~~~~~~~yd~~~~~W~~~~~~p~~-r~~~~~~-~~~~~i~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~ 293 (318)
T 2woz_A 219 GLSASVEAFDLKTNKWEVMTEFPQE-RSSISLV-SLAGSLYAIGGFAMIQLESKEFAPTEVNDIWKYEDDKKEWAGM 293 (318)
T ss_dssp EEEEEEEEEETTTCCEEECCCCSSC-CBSCEEE-EETTEEEEECCBCCBC----CCBCCBCCCEEEEETTTTEEEEE
T ss_pred CccceEEEEECCCCeEEECCCCCCc-ccceEEE-EECCEEEEECCeeccCCCCceeccceeeeEEEEeCCCCEehhh
Confidence 2346677665 889997655432 2222233 33678887643 24589999999999998
No 7
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=99.24 E-value=7.2e-10 Score=100.53 Aligned_cols=226 Identities=13% Similarity=0.079 Sum_probs=133.5
Q ss_pred CCCCccceEeeeeeeeEEEe--ecCceEEEEeCCC--cccccCCCCC-cCCCCcccceeeeeeeeecCCCCCeEEEEEEE
Q 045569 95 LDNPVRGELVGPYNGIFCIF--GNNNRITLWNRAT--KESRVLPKCT-TVFPKYTSIFCKCTGFGLDPMSTDYKLVLIFT 169 (362)
Q Consensus 95 ~~~p~~~~~~~s~~GLl~~~--~~~~~~~V~NP~T--~~~~~LP~~~-~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~ 169 (362)
++.|......+..+|-|.+. .....++++||.+ ++|..+|+.+ .+.... ....++ + +|+.++.
T Consensus 6 lP~~r~~~~~~~~~~~iyv~GG~~~~~~~~~d~~~~~~~W~~~~~~p~~~R~~~-------~~~~~~---~--~lyv~GG 73 (357)
T 2uvk_A 6 TPVPFKSGTGAIDNDTVYIGLGSAGTAWYKLDTQAKDKKWTALAAFPGGPRDQA-------TSAFID---G--NLYVFGG 73 (357)
T ss_dssp CSSCCCSCEEEEETTEEEEECGGGTTCEEEEETTSSSCCEEECCCCTTCCCBSC-------EEEEET---T--EEEEECC
T ss_pred CCccccceEEEEECCEEEEEeCcCCCeEEEEccccCCCCeeECCCCCCCcCccc-------eEEEEC---C--EEEEEcC
Confidence 33333333444457777666 2344699999984 8999998866 332221 111222 1 4554432
Q ss_pred EeecccccccCcceEEEEECCCCCceecccCCCccccccCCcceEEECceEEEEeeccCC--------------------
Q 045569 170 LWNEKLDLLYEFSHVAVYSLSTNSWRYCDCFKSNHYYMDGAFDSVYLDGVCYWLSEFRDN-------------------- 229 (362)
Q Consensus 170 ~~~~~~~~~~~~~~~eVyss~~~~W~~~~~~~~~~~~~~~~~~~v~~~G~lywl~~~~~~-------------------- 229 (362)
..............+++|+..+++|+.+...++ .+. .....+.++|.+|.+......
T Consensus 74 ~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~p-~~r--~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~ 150 (357)
T 2uvk_A 74 IGKNSEGLTQVFNDVHKYNPKTNSWVKLMSHAP-MGM--AGHVTFVHNGKAYVTGGVNQNIFNGYFEDLNEAGKDSTAID 150 (357)
T ss_dssp EEECTTSCEEECCCEEEEETTTTEEEECSCCCS-SCC--SSEEEEEETTEEEEEECCCHHHHHHHHHHHHHHTTCHHHHH
T ss_pred CCCCCCccceeeccEEEEeCCCCcEEECCCCCC-ccc--ccceEEEECCEEEEEeCcCCCcCcccccchhhcCCcccchh
Confidence 101000001123469999999999999887651 221 124557799999999864210
Q ss_pred ---------------CccEEEEEEcCCceeeee-cCCCCCCCCCcEEEEECCeEEEEEEcCC--CCeEEEEEee---C-C
Q 045569 230 ---------------DHKVILSFHLGNEVFEEI-QEPYIPESTPTILGIYNHSLCLLLSHNI--ENYYDIWVMK---Y-K 287 (362)
Q Consensus 230 ---------------~~~~il~fD~~~e~~~~i-~~P~~~~~~~~~l~~~~g~L~l~~~~~~--~~~~~IW~l~---~-~ 287 (362)
....+.+||+.+++|+.+ ++|...... ..++..+|+|++++.... ...-++|.++ + .
T Consensus 151 ~~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~p~~~~~~-~~~~~~~~~iyv~GG~~~~~~~~~~v~~~d~d~~~~ 229 (357)
T 2uvk_A 151 KINAHYFDKKAEDYFFNKFLLSFDPSTQQWSYAGESPWYGTAG-AAVVNKGDKTWLINGEAKPGLRTDAVFELDFTGNNL 229 (357)
T ss_dssp HHHHHHHSSCGGGGCCCCEEEEEETTTTEEEEEEECSSCCCBS-CEEEEETTEEEEECCEEETTEECCCEEEEECC---C
T ss_pred hhhhhhccccccccCCcccEEEEeCCCCcEEECCCCCCCCccc-ccEEEECCEEEEEeeecCCCcccCceEEEEecCCCC
Confidence 124799999999999987 455432221 467788999999876421 1233566654 2 8
Q ss_pred eeEEEEEeCCCCCceeeEEEeeCCcEEEEecC-----------------------CeEEEEeCCCCcEEEee
Q 045569 288 CWIKQLSLGPLNGVRTPLGFWKKGAFFVHSTN-----------------------EQLLLYDPNTQEMRDLG 336 (362)
Q Consensus 288 ~W~~~~~i~~~~~~~~~~~~~~~g~il~~~~~-----------------------~~~~~yd~~~~~~~~v~ 336 (362)
.|.++..++..........+..+++|++..+. ..+..||+++++|+.+.
T Consensus 230 ~W~~~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~~~~~W~~~~ 301 (357)
T 2uvk_A 230 KWNKLAPVSSPDGVAGGFAGISNDSLIFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWHNGKWDKSG 301 (357)
T ss_dssp EEEECCCSSTTTCCBSCEEEEETTEEEEECCEECTTHHHHHHTTCSSTTTTCCCEECCEEEECC---CEEEE
T ss_pred cEEecCCCCCCcccccceEEEECCEEEEEcCccccCCcccccccceeccccccceeeEEEEecCCCceeeCC
Confidence 89987666433222222233446788887541 25789999999999886
No 8
>2e31_A FBS1, F-box only protein 2; ubiquitin, SCF, ubiquitin ligase, FBS1; 2.40A {Mus musculus} PDB: 2e32_A
Probab=99.23 E-value=3.6e-12 Score=110.37 Aligned_cols=51 Identities=18% Similarity=0.372 Sum_probs=47.7
Q ss_pred CcCCCcchHHHHHHHHccCCccccc-cccccccchhhhhCChHHHHHHhhcc
Q 045569 3 MTGDEHFLEETIIEILSKLPVKSLL-RFRCICKSWCALFNKHNFISKHLNND 53 (362)
Q Consensus 3 ~~~~~~LP~Dll~eIL~rLP~ksl~-r~r~VcK~W~~li~~~~F~~~~~~~~ 53 (362)
+..++.||+||+.+||+|||+++|+ ||++|||+|++++++|.|.+.|+.+.
T Consensus 48 ~~~~~~LP~ell~~Il~~Lp~~~L~~r~~~VCk~Wr~l~~~~~~w~~~~~~~ 99 (297)
T 2e31_A 48 VEYLAELPEPLLLRVLAELPATELVQACRLVCLRWKELVDGAPLWLLKCQQE 99 (297)
T ss_dssp CCCTTSSCHHHHHHHHHTSCHHHHHHTGGGTCHHHHHHHTSHHHHHHHHHHT
T ss_pred ccChhhCCHHHHHHHHHcCCHHHHHHHHHHHhHHHHHHhcChHHHHHHhhcc
Confidence 4568899999999999999999999 99999999999999999999998765
No 9
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=99.20 E-value=4e-09 Score=93.42 Aligned_cols=194 Identities=10% Similarity=0.022 Sum_probs=127.3
Q ss_pred CceEEEEeCCCcccccCCCCCcCCCCcccceeeeeeeeecCCCCCeEEEEEEEEeecccccccCcceEEEEECCCCCcee
Q 045569 117 NNRITLWNRATKESRVLPKCTTVFPKYTSIFCKCTGFGLDPMSTDYKLVLIFTLWNEKLDLLYEFSHVAVYSLSTNSWRY 196 (362)
Q Consensus 117 ~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~eVyss~~~~W~~ 196 (362)
...+.++||.+++|..+++.+.+.... ....++ . +++.++.. . ......+++|+..+++|+.
T Consensus 23 ~~~~~~~d~~~~~W~~~~~~p~~r~~~-------~~~~~~----~-~lyv~GG~-~-----~~~~~~~~~~d~~~~~W~~ 84 (306)
T 3ii7_A 23 PQSCRYFNPKDYSWTDIRCPFEKRRDA-------ACVFWD----N-VVYILGGS-Q-----LFPIKRMDCYNVVKDSWYS 84 (306)
T ss_dssp TTSEEEEETTTTEEEECCCCSCCCBSC-------EEEEET----T-EEEEECCB-S-----SSBCCEEEEEETTTTEEEE
T ss_pred CceEEEecCCCCCEecCCCCCccccee-------EEEEEC----C-EEEEEeCC-C-----CCCcceEEEEeCCCCeEEE
Confidence 346999999999999998876543221 111122 1 34444311 1 1223579999999999999
Q ss_pred cccCCCccccccCCcceEEECceEEEEeecc--CCCccEEEEEEcCCceeeee-cCCCCCCCCCcEEEEECCeEEEEEEc
Q 045569 197 CDCFKSNHYYMDGAFDSVYLDGVCYWLSEFR--DNDHKVILSFHLGNEVFEEI-QEPYIPESTPTILGIYNHSLCLLLSH 273 (362)
Q Consensus 197 ~~~~~~~~~~~~~~~~~v~~~G~lywl~~~~--~~~~~~il~fD~~~e~~~~i-~~P~~~~~~~~~l~~~~g~L~l~~~~ 273 (362)
+...+.+.. ....+.++|.+|.+.... ......+..||+.+.+|+.+ ++|..... ...+..+|+|++++..
T Consensus 85 ~~~~p~~r~----~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~--~~~~~~~~~iyv~GG~ 158 (306)
T 3ii7_A 85 KLGPPTPRD----SLAACAAEGKIYTSGGSEVGNSALYLFECYDTRTESWHTKPSMLTQRCS--HGMVEANGLIYVCGGS 158 (306)
T ss_dssp EECCSSCCB----SCEEEEETTEEEEECCBBTTBSCCCCEEEEETTTTEEEEECCCSSCCBS--CEEEEETTEEEEECCE
T ss_pred CCCCCcccc----ceeEEEECCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCCCCcCCcce--eEEEEECCEEEEECCC
Confidence 876553332 256788899999997643 11235699999999999988 45544322 4667789999998864
Q ss_pred CCC-C----eEEEEEeeC--CeeEEEEEeCCCCCceeeEEEeeCCcEEEEec------CCeEEEEeCCCCcEEEee
Q 045569 274 NIE-N----YYDIWVMKY--KCWIKQLSLGPLNGVRTPLGFWKKGAFFVHST------NEQLLLYDPNTQEMRDLG 336 (362)
Q Consensus 274 ~~~-~----~~~IW~l~~--~~W~~~~~i~~~~~~~~~~~~~~~g~il~~~~------~~~~~~yd~~~~~~~~v~ 336 (362)
... . .-++|+++- ..|+++..++.. ...... +.-+++|++..+ ...+..||+++++|+.+.
T Consensus 159 ~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~-r~~~~~-~~~~~~i~v~GG~~~~~~~~~~~~yd~~~~~W~~~~ 232 (306)
T 3ii7_A 159 LGNNVSGRVLNSCEVYDPATETWTELCPMIEA-RKNHGL-VFVKDKIFAVGGQNGLGGLDNVEYYDIKLNEWKMVS 232 (306)
T ss_dssp ESCTTTCEECCCEEEEETTTTEEEEECCCSSC-CBSCEE-EEETTEEEEECCEETTEEBCCEEEEETTTTEEEECC
T ss_pred CCCCCcccccceEEEeCCCCCeEEECCCccch-hhcceE-EEECCEEEEEeCCCCCCCCceEEEeeCCCCcEEECC
Confidence 311 1 335666654 899988654422 122222 333678888743 256999999999999885
No 10
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=99.18 E-value=6.2e-09 Score=92.65 Aligned_cols=199 Identities=9% Similarity=0.023 Sum_probs=123.1
Q ss_pred eEEEEeCCCcccccCCCCCcCCCCcccceeeeeeeeecCCCCCeEEEEEEEEeec-ccccccCcceEEEEECCCCCceec
Q 045569 119 RITLWNRATKESRVLPKCTTVFPKYTSIFCKCTGFGLDPMSTDYKLVLIFTLWNE-KLDLLYEFSHVAVYSLSTNSWRYC 197 (362)
Q Consensus 119 ~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~-~~~~~~~~~~~eVyss~~~~W~~~ 197 (362)
.+.++||.|++|.. ++.+.+.... ..+... ..+ +++.++..... ..........+++|+..+++|+.+
T Consensus 14 ~~~~yd~~~~~W~~-~~~~~p~~r~------~~~~~~--~~~--~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~ 82 (315)
T 4asc_A 14 GAVAYDPAANECYC-ASLSSQVPKN------HVSLVT--KEN--QVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWLGM 82 (315)
T ss_dssp EEEEEETTTTEEEE-EECCCCSCSS------EEEEEC--TTC--CEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEEEC
T ss_pred ceEEECCCCCeEec-CCCCCCCCcc------ceEEEE--ECC--EEEEEcCcccCCCCCccccccceEEecCCCCeEEEC
Confidence 48999999999976 3332222221 122221 122 33333321111 101111123489999999999998
Q ss_pred ccCCCccccccCCcceEEECceEEEEeecc----CCCccEEEEEEcCCceeeee-cCCCCCCCCCcEEEEECCeEEEEEE
Q 045569 198 DCFKSNHYYMDGAFDSVYLDGVCYWLSEFR----DNDHKVILSFHLGNEVFEEI-QEPYIPESTPTILGIYNHSLCLLLS 272 (362)
Q Consensus 198 ~~~~~~~~~~~~~~~~v~~~G~lywl~~~~----~~~~~~il~fD~~~e~~~~i-~~P~~~~~~~~~l~~~~g~L~l~~~ 272 (362)
+..+.+.. ....+.++|.+|.+.... ......+.+||+.+.+|+.+ ++|..... ...+..+|+|++++.
T Consensus 83 ~~~p~~r~----~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~--~~~~~~~~~iyv~GG 156 (315)
T 4asc_A 83 PPLPSPRC----LFGLGEALNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYVVYG--HTVLSHMDLVYVIGG 156 (315)
T ss_dssp CCBSSCEE----SCEEEEETTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSSCCBS--CEEEEETTEEEEECC
T ss_pred CCCCcchh----ceeEEEECCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCCcccc--eeEEEECCEEEEEeC
Confidence 76554332 256788899999998632 12245699999999999987 45554322 467779999999987
Q ss_pred cC--CCCeEEEEEeeC--CeeEEEEEeCCCCCceeeEEEeeCCcEEEEec------CCeEEEEeCCCCcEEEee
Q 045569 273 HN--IENYYDIWVMKY--KCWIKQLSLGPLNGVRTPLGFWKKGAFFVHST------NEQLLLYDPNTQEMRDLG 336 (362)
Q Consensus 273 ~~--~~~~~~IW~l~~--~~W~~~~~i~~~~~~~~~~~~~~~g~il~~~~------~~~~~~yd~~~~~~~~v~ 336 (362)
.. ....-++|+++- ..|++...++.. .. ...++.-+++|++..+ ...+..||+++++|+.+.
T Consensus 157 ~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~-r~-~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~ 228 (315)
T 4asc_A 157 KGSDRKCLNKMCVYDPKKFEWKELAPMQTA-RS-LFGATVHDGRIIVAAGVTDTGLTSSAEVYSITDNKWAPFE 228 (315)
T ss_dssp BCTTSCBCCCEEEEETTTTEEEECCCCSSC-CB-SCEEEEETTEEEEEEEECSSSEEEEEEEEETTTTEEEEEC
T ss_pred CCCCCcccceEEEEeCCCCeEEECCCCCCc-hh-ceEEEEECCEEEEEeccCCCCccceEEEEECCCCeEEECC
Confidence 52 222335666665 899987655432 12 2222333678888754 135999999999999886
No 11
>1fs1_A SKP2 F-BOX, cyclin A/CDK2-associated P19; F-BOX, LRR, leucine-rich repeat, SCF, ubiquitin, ubiquitin protein ligase; 1.80A {Homo sapiens} SCOP: a.158.1.1 PDB: 1ldk_E
Probab=99.16 E-value=1.1e-11 Score=79.16 Aligned_cols=44 Identities=23% Similarity=0.448 Sum_probs=39.2
Q ss_pred cCCCcchHHHHHHHHccCCccccccccccccchhhhhCChHHHH
Q 045569 4 TGDEHFLEETIIEILSKLPVKSLLRFRCICKSWCALFNKHNFIS 47 (362)
Q Consensus 4 ~~~~~LP~Dll~eIL~rLP~ksl~r~r~VcK~W~~li~~~~F~~ 47 (362)
..++.||+|++.+||++||++++.++++|||+|+.++.++.|-+
T Consensus 7 ~~~~~LP~eil~~I~~~L~~~dl~~~~~Vck~w~~~~~~~~lW~ 50 (53)
T 1fs1_A 7 VSWDSLPDELLLGIFSCLCLPELLKVSGVCKRWYRLASDESLWQ 50 (53)
T ss_dssp --CCSSCHHHHHHHHTTSCGGGHHHHHTTCHHHHHHHTCGGGC-
T ss_pred CCHHHCCHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCChHHHH
Confidence 35789999999999999999999999999999999999988754
No 12
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=99.16 E-value=1.5e-08 Score=89.50 Aligned_cols=193 Identities=11% Similarity=0.078 Sum_probs=126.5
Q ss_pred eEEEEeCCCcccccCCCCCcCCCCcccceeeeeeeeecCCCCCeEEEEEEEEeecccccccCcceEEEEECCCCC---ce
Q 045569 119 RITLWNRATKESRVLPKCTTVFPKYTSIFCKCTGFGLDPMSTDYKLVLIFTLWNEKLDLLYEFSHVAVYSLSTNS---WR 195 (362)
Q Consensus 119 ~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~eVyss~~~~---W~ 195 (362)
.++++||.|++|..+|+.+.+.... .....+ =+++.++.. .+ ......+++|+..+++ |+
T Consensus 32 ~~~~~d~~~~~W~~~~~~p~~r~~~-------~~~~~~-----~~l~v~GG~-~~----~~~~~~~~~~d~~~~~~~~W~ 94 (301)
T 2vpj_A 32 VVEKYDPKTQEWSFLPSITRKRRYV-------ASVSLH-----DRIYVIGGY-DG----RSRLSSVECLDYTADEDGVWY 94 (301)
T ss_dssp CEEEEETTTTEEEECCCCSSCCBSC-------EEEEET-----TEEEEECCB-CS----SCBCCCEEEEETTCCTTCCCE
T ss_pred EEEEEcCCCCeEEeCCCCChhhccc-------cEEEEC-----CEEEEEcCC-CC----CccCceEEEEECCCCCCCeeE
Confidence 5899999999999998766533221 111222 145544321 11 1123469999999999 99
Q ss_pred ecccCCCccccccCCcceEEECceEEEEeeccCC-CccEEEEEEcCCceeeee-cCCCCCCCCCcEEEEECCeEEEEEEc
Q 045569 196 YCDCFKSNHYYMDGAFDSVYLDGVCYWLSEFRDN-DHKVILSFHLGNEVFEEI-QEPYIPESTPTILGIYNHSLCLLLSH 273 (362)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~v~~~G~lywl~~~~~~-~~~~il~fD~~~e~~~~i-~~P~~~~~~~~~l~~~~g~L~l~~~~ 273 (362)
.+...+.+.. ....+.++|.+|.+...... ....+..||+.+.+|+.+ ++|..... ...+..+|+|++++..
T Consensus 95 ~~~~~p~~r~----~~~~~~~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~--~~~~~~~~~iyv~GG~ 168 (301)
T 2vpj_A 95 SVAPMNVRRG----LAGATTLGDMIYVSGGFDGSRRHTSMERYDPNIDQWSMLGDMQTAREG--AGLVVASGVIYCLGGY 168 (301)
T ss_dssp EECCCSSCCB----SCEEEEETTEEEEECCBCSSCBCCEEEEEETTTTEEEEEEECSSCCBS--CEEEEETTEEEEECCB
T ss_pred ECCCCCCCcc----ceeEEEECCEEEEEcccCCCcccceEEEEcCCCCeEEECCCCCCCccc--ceEEEECCEEEEECCC
Confidence 9976554332 26678889999999764421 134799999999999987 45544322 4567789999998875
Q ss_pred CCC-CeEEEEEeeC--CeeEEEEEeCCCCCceeeEEEeeCCcEEEEec------CCeEEEEeCCCCcEEEee
Q 045569 274 NIE-NYYDIWVMKY--KCWIKQLSLGPLNGVRTPLGFWKKGAFFVHST------NEQLLLYDPNTQEMRDLG 336 (362)
Q Consensus 274 ~~~-~~~~IW~l~~--~~W~~~~~i~~~~~~~~~~~~~~~g~il~~~~------~~~~~~yd~~~~~~~~v~ 336 (362)
... ..-++|+++- ..|++...++.. .. ....+..+++|++..+ ...+..||+++++|+.+.
T Consensus 169 ~~~~~~~~~~~~d~~~~~W~~~~~~p~~-r~-~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~ 238 (301)
T 2vpj_A 169 DGLNILNSVEKYDPHTGHWTNVTPMATK-RS-GAGVALLNDHIYVVGGFDGTAHLSSVEAYNIRTDSWTTVT 238 (301)
T ss_dssp CSSCBCCCEEEEETTTTEEEEECCCSSC-CB-SCEEEEETTEEEEECCBCSSSBCCCEEEEETTTTEEEEEC
T ss_pred CCCcccceEEEEeCCCCcEEeCCCCCcc-cc-cceEEEECCEEEEEeCCCCCcccceEEEEeCCCCcEEECC
Confidence 321 2335666654 899988544422 12 2222334678888754 246999999999999886
No 13
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=99.14 E-value=1.4e-08 Score=89.81 Aligned_cols=194 Identities=9% Similarity=0.136 Sum_probs=125.9
Q ss_pred ceEEEEeCCCcccccCCCCCcCCCCcccceeeeeeeeecCCCCCeEEEEEEEEeecccccccCcceEEEEECCCCCceec
Q 045569 118 NRITLWNRATKESRVLPKCTTVFPKYTSIFCKCTGFGLDPMSTDYKLVLIFTLWNEKLDLLYEFSHVAVYSLSTNSWRYC 197 (362)
Q Consensus 118 ~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~eVyss~~~~W~~~ 197 (362)
..+.++||.+++|..+++.+.+.... . ...++ -+++.++. ... ......+++|+..+++|+.+
T Consensus 30 ~~~~~~d~~~~~W~~~~~~p~~r~~~------~-~~~~~-----~~lyv~GG-~~~----~~~~~~~~~~d~~~~~W~~~ 92 (302)
T 2xn4_A 30 RSVECYDFKEERWHQVAELPSRRCRA------G-MVYMA-----GLVFAVGG-FNG----SLRVRTVDSYDPVKDQWTSV 92 (302)
T ss_dssp CCEEEEETTTTEEEEECCCSSCCBSC------E-EEEET-----TEEEEESC-BCS----SSBCCCEEEEETTTTEEEEE
T ss_pred CcEEEEcCcCCcEeEcccCCcccccc------e-EEEEC-----CEEEEEeC-cCC----CccccceEEECCCCCceeeC
Confidence 35889999999999998766533221 1 11111 23444431 111 11234699999999999999
Q ss_pred ccCCCccccccCCcceEEECceEEEEeeccCC-CccEEEEEEcCCceeeeec-CCCCCCCCCcEEEEECCeEEEEEEcCC
Q 045569 198 DCFKSNHYYMDGAFDSVYLDGVCYWLSEFRDN-DHKVILSFHLGNEVFEEIQ-EPYIPESTPTILGIYNHSLCLLLSHNI 275 (362)
Q Consensus 198 ~~~~~~~~~~~~~~~~v~~~G~lywl~~~~~~-~~~~il~fD~~~e~~~~i~-~P~~~~~~~~~l~~~~g~L~l~~~~~~ 275 (362)
...+.+.. ....+.++|.+|.+...... ....+..||+.+++|+.++ +|..... ...+..+|+|++++....
T Consensus 93 ~~~p~~r~----~~~~~~~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~--~~~~~~~~~iyv~GG~~~ 166 (302)
T 2xn4_A 93 ANMRDRRS----TLGAAVLNGLLYAVGGFDGSTGLSSVEAYNIKSNEWFHVAPMNTRRSS--VGVGVVGGLLYAVGGYDV 166 (302)
T ss_dssp CCCSSCCB----SCEEEEETTEEEEEEEECSSCEEEEEEEEETTTTEEEEECCCSSCCBS--CEEEEETTEEEEECCEET
T ss_pred CCCCcccc----ceEEEEECCEEEEEcCCCCCccCceEEEEeCCCCeEeecCCCCCcccC--ceEEEECCEEEEEeCCCC
Confidence 86654332 25678889999999864321 1346899999999999884 4443222 466778999999886432
Q ss_pred CC---eEEEEEeeC--CeeEEEEEeCCCCCceeeEEEeeCCcEEEEec------CCeEEEEeCCCCcEEEee
Q 045569 276 EN---YYDIWVMKY--KCWIKQLSLGPLNGVRTPLGFWKKGAFFVHST------NEQLLLYDPNTQEMRDLG 336 (362)
Q Consensus 276 ~~---~~~IW~l~~--~~W~~~~~i~~~~~~~~~~~~~~~g~il~~~~------~~~~~~yd~~~~~~~~v~ 336 (362)
.. .-++|+.+- ..|++...++.. ...... +..+++|++..+ ...+..||+++++|+.+.
T Consensus 167 ~~~~~~~~~~~yd~~~~~W~~~~~~p~~-r~~~~~-~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~ 236 (302)
T 2xn4_A 167 ASRQCLSTVECYNATTNEWTYIAEMSTR-RSGAGV-GVLNNLLYAVGGHDGPLVRKSVEVYDPTTNAWRQVA 236 (302)
T ss_dssp TTTEECCCEEEEETTTTEEEEECCCSSC-CBSCEE-EEETTEEEEECCBSSSSBCCCEEEEETTTTEEEEEC
T ss_pred CCCccccEEEEEeCCCCcEEECCCCccc-cccccE-EEECCEEEEECCCCCCcccceEEEEeCCCCCEeeCC
Confidence 11 224566654 899998655432 222222 333678888754 246999999999999876
No 14
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=99.10 E-value=9.2e-09 Score=91.27 Aligned_cols=198 Identities=11% Similarity=0.061 Sum_probs=125.8
Q ss_pred ceEEEEeCCCcccccCCCCCcCCCCcccceeeeeeeeecCCCCCeEEEEEEEEeecccccccCcceEEEEECCCCCceec
Q 045569 118 NRITLWNRATKESRVLPKCTTVFPKYTSIFCKCTGFGLDPMSTDYKLVLIFTLWNEKLDLLYEFSHVAVYSLSTNSWRYC 197 (362)
Q Consensus 118 ~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~eVyss~~~~W~~~ 197 (362)
..+.++||.|++|..+++.+.+.... .. ...+ + +++.++...... ........+++|+..+++|+.+
T Consensus 39 ~~~~~~d~~~~~W~~~~~~p~~r~~~------~~-~~~~---~--~lyv~GG~~~~~-~~~~~~~~~~~~d~~~~~W~~~ 105 (308)
T 1zgk_A 39 SYLEAYNPSNGTWLRLADLQVPRSGL------AG-CVVG---G--LLYAVGGRNNSP-DGNTDSSALDCYNPMTNQWSPC 105 (308)
T ss_dssp CCEEEEETTTTEEEECCCCSSCCBSC------EE-EEET---T--EEEEECCEEEET-TEEEECCCEEEEETTTTEEEEC
T ss_pred ceEEEEcCCCCeEeECCCCCcccccc------eE-EEEC---C--EEEEECCCcCCC-CCCeecceEEEECCCCCeEeEC
Confidence 35899999999999998766543221 11 1111 1 344443211000 0011234699999999999998
Q ss_pred ccCCCccccccCCcceEEECceEEEEeeccCC-CccEEEEEEcCCceeeee-cCCCCCCCCCcEEEEECCeEEEEEEcCC
Q 045569 198 DCFKSNHYYMDGAFDSVYLDGVCYWLSEFRDN-DHKVILSFHLGNEVFEEI-QEPYIPESTPTILGIYNHSLCLLLSHNI 275 (362)
Q Consensus 198 ~~~~~~~~~~~~~~~~v~~~G~lywl~~~~~~-~~~~il~fD~~~e~~~~i-~~P~~~~~~~~~l~~~~g~L~l~~~~~~ 275 (362)
...+.+.. ....+.++|.+|.+...... ....+..||+.+++|+.+ ++|..... ...+..+|+|++++....
T Consensus 106 ~~~p~~r~----~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~--~~~~~~~~~iyv~GG~~~ 179 (308)
T 1zgk_A 106 APMSVPRN----RIGVGVIDGHIYAVGGSHGCIHHNSVERYEPERDEWHLVAPMLTRRIG--VGVAVLNRLLYAVGGFDG 179 (308)
T ss_dssp CCCSSCCB----TCEEEEETTEEEEECCEETTEECCCEEEEETTTTEEEECCCCSSCCBS--CEEEEETTEEEEECCBCS
T ss_pred CCCCcCcc----ccEEEEECCEEEEEcCCCCCcccccEEEECCCCCeEeECCCCCccccc--eEEEEECCEEEEEeCCCC
Confidence 76554332 25678889999999754311 124689999999999988 45544322 456777999999987532
Q ss_pred C-CeEEEEEeeC--CeeEEEEEeCCCCCceeeEEEeeCCcEEEEec------CCeEEEEeCCCCcEEEee
Q 045569 276 E-NYYDIWVMKY--KCWIKQLSLGPLNGVRTPLGFWKKGAFFVHST------NEQLLLYDPNTQEMRDLG 336 (362)
Q Consensus 276 ~-~~~~IW~l~~--~~W~~~~~i~~~~~~~~~~~~~~~g~il~~~~------~~~~~~yd~~~~~~~~v~ 336 (362)
. ..-++|+++- ..|++...++.. ........ -+++|++..+ ...+..||+++++|+.+.
T Consensus 180 ~~~~~~~~~yd~~~~~W~~~~~~p~~-r~~~~~~~-~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~ 247 (308)
T 1zgk_A 180 TNRLNSAECYYPERNEWRMITAMNTI-RSGAGVCV-LHNCIYAAGGYDGQDQLNSVERYDVETETWTFVA 247 (308)
T ss_dssp SCBCCCEEEEETTTTEEEECCCCSSC-CBSCEEEE-ETTEEEEECCBCSSSBCCCEEEEETTTTEEEECC
T ss_pred CCcCceEEEEeCCCCeEeeCCCCCCc-cccceEEE-ECCEEEEEeCCCCCCccceEEEEeCCCCcEEECC
Confidence 1 1234555554 899987654432 22222233 3778888754 256999999999999876
No 15
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=99.03 E-value=2.9e-08 Score=88.37 Aligned_cols=208 Identities=10% Similarity=0.072 Sum_probs=124.1
Q ss_pred eeEEEeecCceEEEEeCCCcccccCCCCCcCCCCcccceeeeeeeeecCCCCCeEEEEEEEEe-ecccccccCcceEEEE
Q 045569 109 GIFCIFGNNNRITLWNRATKESRVLPKCTTVFPKYTSIFCKCTGFGLDPMSTDYKLVLIFTLW-NEKLDLLYEFSHVAVY 187 (362)
Q Consensus 109 GLl~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~-~~~~~~~~~~~~~eVy 187 (362)
+.|++.+.. ...++||.|++|...|.+.. .... ..+... .. =+|+.++... ............+++|
T Consensus 16 ~~i~~~GG~-~~~~yd~~~~~W~~~~~~~~-~~r~------~~~~~~--~~--~~lyv~GG~~~~~~~~~~~~~~~~~~~ 83 (318)
T 2woz_A 16 DLILLVNDT-AAVAYDPMENECYLTALAEQ-IPRN------HSSIVT--QQ--NQVYVVGGLYVDEENKDQPLQSYFFQL 83 (318)
T ss_dssp EEEEEECSS-EEEEEETTTTEEEEEEECTT-SCSS------EEEEEC--SS--SCEEEEESSCC-------CCCBEEEEE
T ss_pred chhhhcccc-ceEEECCCCCceecccCCcc-CCcc------ceEEEE--EC--CEEEEECCcccCccccCCCccccEEEE
Confidence 444444322 27899999999988433211 1111 112111 11 1344443210 0000001112348999
Q ss_pred ECCCCCceecccCCCccccccCCcceEEECceEEEEeeccC---CCccEEEEEEcCCceeeee-cCCCCCCCCCcEEEEE
Q 045569 188 SLSTNSWRYCDCFKSNHYYMDGAFDSVYLDGVCYWLSEFRD---NDHKVILSFHLGNEVFEEI-QEPYIPESTPTILGIY 263 (362)
Q Consensus 188 ss~~~~W~~~~~~~~~~~~~~~~~~~v~~~G~lywl~~~~~---~~~~~il~fD~~~e~~~~i-~~P~~~~~~~~~l~~~ 263 (362)
+..+++|+.++..+.+.. ....+.++|.+|.+..... .....+.+||+.+.+|+.+ ++|..... ...+..
T Consensus 84 d~~~~~W~~~~~~p~~r~----~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~--~~~~~~ 157 (318)
T 2woz_A 84 DNVSSEWVGLPPLPSARC----LFGLGEVDDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNLPIKVYG--HNVISH 157 (318)
T ss_dssp ETTTTEEEECSCBSSCBC----SCEEEEETTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECCCSSCEES--CEEEEE
T ss_pred eCCCCcEEECCCCCcccc----ccceEEECCEEEEEcCccCCCCcccceEEEEeCCCCCEeECCCCCCcccc--cEEEEE
Confidence 999999999876554332 2567888999999986531 1234699999999999988 45544322 456678
Q ss_pred CCeEEEEEEcC--CCCeEEEEEeeC--CeeEEEEEeCCCCCceeeEEEeeCCcEEEEec------CCeEEEEeCCCCcEE
Q 045569 264 NHSLCLLLSHN--IENYYDIWVMKY--KCWIKQLSLGPLNGVRTPLGFWKKGAFFVHST------NEQLLLYDPNTQEMR 333 (362)
Q Consensus 264 ~g~L~l~~~~~--~~~~~~IW~l~~--~~W~~~~~i~~~~~~~~~~~~~~~g~il~~~~------~~~~~~yd~~~~~~~ 333 (362)
+|+|++++... ....-++|+++- ..|++...++.. ...... +..+++|++..+ ...+..||+++++|+
T Consensus 158 ~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~-r~~~~~-~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~ 235 (318)
T 2woz_A 158 NGMIYCLGGKTDDKKCTNRVFIYNPKKGDWKDLAPMKTP-RSMFGV-AIHKGKIVIAGGVTEDGLSASVEAFDLKTNKWE 235 (318)
T ss_dssp TTEEEEECCEESSSCBCCCEEEEETTTTEEEEECCCSSC-CBSCEE-EEETTEEEEEEEEETTEEEEEEEEEETTTCCEE
T ss_pred CCEEEEEcCCCCCCCccceEEEEcCCCCEEEECCCCCCC-cccceE-EEECCEEEEEcCcCCCCccceEEEEECCCCeEE
Confidence 99999988642 112234666665 889988654432 122222 234678888753 245889999999999
Q ss_pred Eee
Q 045569 334 DLG 336 (362)
Q Consensus 334 ~v~ 336 (362)
.+.
T Consensus 236 ~~~ 238 (318)
T 2woz_A 236 VMT 238 (318)
T ss_dssp ECC
T ss_pred ECC
Confidence 886
No 16
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=98.99 E-value=2.2e-07 Score=86.45 Aligned_cols=282 Identities=12% Similarity=0.053 Sum_probs=143.6
Q ss_pred cCCCcchHHHHHHHHccCCccccccccccccchhhhhCChHHHHHHhhccCCCCceeeEE-eeecCCCCCccceeeeecC
Q 045569 4 TGDEHFLEETIIEILSKLPVKSLLRFRCICKSWCALFNKHNFISKHLNNDHNTRLIVHYM-EKFDGPDESSYPLFLCSLF 82 (362)
Q Consensus 4 ~~~~~LP~Dll~eIL~rLP~ksl~r~r~VcK~W~~li~~~~F~~~~~~~~~~~~~~~~ll-~~~~~~~~~~~~~~~~~~~ 82 (362)
..++.||+|++..||+.|++++|.++.+|||+|+.++.++.+.+....+..... +.... +...........|......
T Consensus 17 d~~~~lp~e~~~~i~~~l~~~~l~~~~~v~~~~~~~~~~~~~w~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~wk~~~~~ 95 (445)
T 2ovr_B 17 DFISLLPKELALYVLSFLEPKDLLQAAQTCRYWRILAEDNLLWREKCKEEGIDE-PLHIKRRKVIKPGFIHSPWKSAYIR 95 (445)
T ss_dssp STTTSSCHHHHHHHHTTSCHHHHHHHTTSCHHHHHHHTCSHHHHHHHTTTTCCS-CCCCCC--CCSSCCCCCHHHHHHHH
T ss_pred ChhHHCCHHHHHHHHHhCCHHHHHHHHHHhHHHHhhcCchhHhhhheeeccccc-ccccccceecCCCccCCcHHHHHhh
Confidence 457789999999999999999999999999999999999988876654321110 00000 0000000000000000000
Q ss_pred ---------CCCcccccCccCCCCCccceEeeeeeeeEEEeecCceEEEEeCCCccccc-CCCCCcCCCCcccceeeeee
Q 045569 83 ---------PDETLTNLSLQDLDNPVRGELVGPYNGIFCIFGNNNRITLWNRATKESRV-LPKCTTVFPKYTSIFCKCTG 152 (362)
Q Consensus 83 ---------~~~~~~~~~~~~~~~p~~~~~~~s~~GLl~~~~~~~~~~V~NP~T~~~~~-LP~~~~~~~~~~~~~~~~~~ 152 (362)
.........+.....+ ....+...+.+|+..+.++.+.|||..+++... ++... .. ...
T Consensus 96 ~~~~~~~w~~~~~~~~~~l~~h~~~-v~~~~~~~g~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~----~~------v~~ 164 (445)
T 2ovr_B 96 QHRIDTNWRRGELKSPKVLKGHDDH-VITCLQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHT----GG------VWS 164 (445)
T ss_dssp HHHHHHHHHHSCCCCCEEEECSTTS-CEEEEEEETTEEEEEETTSCEEEEETTTCCEEEECCCCS----SC------EEE
T ss_pred hhhhhhcccCCCcceeEEecccCCC-cEEEEEEcCCEEEEEECCCcEEEEECCCCcEEEEEcCCC----CC------EEE
Confidence 0000000000000000 023344455666666777779999999887543 32111 11 344
Q ss_pred eeecCCCCCeEEEEEEEEeecccccccCcceEEEEECCCCCcee-cccCCCccccccCCcceEEECceEEEEeeccCCCc
Q 045569 153 FGLDPMSTDYKLVLIFTLWNEKLDLLYEFSHVAVYSLSTNSWRY-CDCFKSNHYYMDGAFDSVYLDGVCYWLSEFRDNDH 231 (362)
Q Consensus 153 ~g~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~eVyss~~~~W~~-~~~~~~~~~~~~~~~~~v~~~G~lywl~~~~~~~~ 231 (362)
+.+++ + .++... . ...+.+++..++.-.. .... .. .-.++..+|........ .
T Consensus 165 ~~~~~---~-~l~s~~---~--------dg~i~vwd~~~~~~~~~~~~h---~~----~v~~~~~~~~~l~s~s~----d 218 (445)
T 2ovr_B 165 SQMRD---N-IIISGS---T--------DRTLKVWNAETGECIHTLYGH---TS----TVRCMHLHEKRVVSGSR----D 218 (445)
T ss_dssp EEEET---T-EEEEEE---T--------TSCEEEEETTTTEEEEEECCC---SS----CEEEEEEETTEEEEEET----T
T ss_pred EEecC---C-EEEEEe---C--------CCeEEEEECCcCcEEEEECCC---CC----cEEEEEecCCEEEEEeC----C
Confidence 45542 2 222221 1 1358889888763221 1111 00 12334445544333332 3
Q ss_pred cEEEEEEcCCceee-eecCCCCCCCCCcEEEEECCeEEEEEEcCCCCeEEEEEeeCCeeEEEEEeCCCCCceeeEEEeeC
Q 045569 232 KVILSFHLGNEVFE-EIQEPYIPESTPTILGIYNHSLCLLLSHNIENYYDIWVMKYKCWIKQLSLGPLNGVRTPLGFWKK 310 (362)
Q Consensus 232 ~~il~fD~~~e~~~-~i~~P~~~~~~~~~l~~~~g~L~l~~~~~~~~~~~IW~l~~~~W~~~~~i~~~~~~~~~~~~~~~ 310 (362)
..|..+|+.+.+.. .+.... ........+|...+++. ....+.+|-++... ....+.........+.+ +
T Consensus 219 g~i~~wd~~~~~~~~~~~~~~----~~v~~~~~~~~~l~~~~--~dg~i~iwd~~~~~--~~~~~~~~~~~v~~~~~--~ 288 (445)
T 2ovr_B 219 ATLRVWDIETGQCLHVLMGHV----AAVRCVQYDGRRVVSGA--YDFMVKVWDPETET--CLHTLQGHTNRVYSLQF--D 288 (445)
T ss_dssp SEEEEEESSSCCEEEEEECCS----SCEEEEEECSSCEEEEE--TTSCEEEEEGGGTE--EEEEECCCSSCEEEEEE--C
T ss_pred CEEEEEECCCCcEEEEEcCCc----ccEEEEEECCCEEEEEc--CCCEEEEEECCCCc--EeEEecCCCCceEEEEE--C
Confidence 47889998876543 232211 11233344777666665 46789999887632 33344322211122222 4
Q ss_pred CcEEE-EecCCeEEEEeCCCCcEE
Q 045569 311 GAFFV-HSTNEQLLLYDPNTQEMR 333 (362)
Q Consensus 311 g~il~-~~~~~~~~~yd~~~~~~~ 333 (362)
+..++ ...++.+..||+++++..
T Consensus 289 ~~~l~~~~~d~~i~i~d~~~~~~~ 312 (445)
T 2ovr_B 289 GIHVVSGSLDTSIRVWDVETGNCI 312 (445)
T ss_dssp SSEEEEEETTSCEEEEETTTCCEE
T ss_pred CCEEEEEeCCCeEEEEECCCCCEE
Confidence 55444 445788999999887654
No 17
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=98.97 E-value=3.1e-08 Score=97.74 Aligned_cols=212 Identities=11% Similarity=0.150 Sum_probs=128.7
Q ss_pred eeeeEEEe-ec----CceEEEEeCCCcccccCC-CCC---cCCCCcccceeeeeeeeecCCCCCeEEEEEEEEeeccccc
Q 045569 107 YNGIFCIF-GN----NNRITLWNRATKESRVLP-KCT---TVFPKYTSIFCKCTGFGLDPMSTDYKLVLIFTLWNEKLDL 177 (362)
Q Consensus 107 ~~GLl~~~-~~----~~~~~V~NP~T~~~~~LP-~~~---~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~ 177 (362)
.+|-|++. +. .+.++++||.|++|..++ +.+ .+..... +....+..+ =+++.++.. ...
T Consensus 396 ~~~~iyv~GG~~~~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~---hs~~~~~~~-----~~lyv~GG~-~~~--- 463 (695)
T 2zwa_A 396 AGNDVFYMGGSNPYRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMC---HTFTTISRN-----NQLLLIGGR-KAP--- 463 (695)
T ss_dssp CSSCEEEECCBSSSBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBS---CEEEEETTT-----TEEEEECCB-SST---
T ss_pred ECCEEEEECCCCCCCcCcEEEEECCCCeEEEeccCCCCCCCCccccc---eEEEEEccC-----CEEEEEcCC-CCC---
Confidence 45655555 32 246899999999999987 421 1111110 111111001 135555321 111
Q ss_pred ccCcceEEEEECCCCCceecccCCCccccccCCcceEEE-CceEEEEeeccCCCccEEEEEEcCCceeeeec----CCCC
Q 045569 178 LYEFSHVAVYSLSTNSWRYCDCFKSNHYYMDGAFDSVYL-DGVCYWLSEFRDNDHKVILSFHLGNEVFEEIQ----EPYI 252 (362)
Q Consensus 178 ~~~~~~~eVyss~~~~W~~~~~~~~~~~~~~~~~~~v~~-~G~lywl~~~~~~~~~~il~fD~~~e~~~~i~----~P~~ 252 (362)
......+++|+..+++|+.+...+.+... ..++.+ +|.+|......... .+.+||+.+++|+.++ +|..
T Consensus 464 ~~~~~dv~~yd~~t~~W~~~~~~p~~R~~----h~~~~~~~~~iyv~GG~~~~~--~v~~yd~~t~~W~~~~~~g~~p~~ 537 (695)
T 2zwa_A 464 HQGLSDNWIFDMKTREWSMIKSLSHTRFR----HSACSLPDGNVLILGGVTEGP--AMLLYNVTEEIFKDVTPKDEFFQN 537 (695)
T ss_dssp TCBCCCCEEEETTTTEEEECCCCSBCCBS----CEEEECTTSCEEEECCBCSSC--SEEEEETTTTEEEECCCSSGGGGS
T ss_pred CCccccEEEEeCCCCcEEECCCCCCCccc----ceEEEEcCCEEEEECCCCCCC--CEEEEECCCCceEEccCCCCCCCc
Confidence 11234699999999999999765543321 555665 99999998654322 7999999999999886 4443
Q ss_pred CCCCCcEEEEEC---CeEEEEEEcCC-----CCeEEEEEeeCCe------eEEEEEeCCCCCceeeEEEeeCCcEEEEec
Q 045569 253 PESTPTILGIYN---HSLCLLLSHNI-----ENYYDIWVMKYKC------WIKQLSLGPLNGVRTPLGFWKKGAFFVHST 318 (362)
Q Consensus 253 ~~~~~~~l~~~~---g~L~l~~~~~~-----~~~~~IW~l~~~~------W~~~~~i~~~~~~~~~~~~~~~g~il~~~~ 318 (362)
... ...+.++ |+|++++.... ...+.+|-++... |.++...++........+..++++|++..+
T Consensus 538 r~~--~~a~v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~~p~~~R~~~~~~~~~~~~iyv~GG 615 (695)
T 2zwa_A 538 SLV--SAGLEFDPVSKQGIILGGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQHPLFQRYGSQIKYITPRKLLIVGG 615 (695)
T ss_dssp CCB--SCEEEEETTTTEEEEECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEECGGGCCBSCEEEEEETTEEEEECC
T ss_pred ccc--eeEEEEeCCCCEEEEECCcCCCCCeeeCcEEEEEccCCccccceEEEEcCCCCCCCcccceEEEeCCCEEEEECC
Confidence 322 2233434 88999987521 2345555555555 888877432333334445555588888754
Q ss_pred ---------CCeEEEEeCCCCcEEEeeEe
Q 045569 319 ---------NEQLLLYDPNTQEMRDLGRK 338 (362)
Q Consensus 319 ---------~~~~~~yd~~~~~~~~v~~~ 338 (362)
...+..||+++++|+.+.+.
T Consensus 616 ~~~~~~~~~~~~v~~yd~~t~~W~~~~~p 644 (695)
T 2zwa_A 616 TSPSGLFDRTNSIISLDPLSETLTSIPIS 644 (695)
T ss_dssp BCSSCCCCTTTSEEEEETTTTEEEECCCC
T ss_pred ccCCCCCCCCCeEEEEECCCCeEEEeecc
Confidence 24599999999999976653
No 18
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=98.95 E-value=2.3e-07 Score=83.91 Aligned_cols=226 Identities=12% Similarity=0.100 Sum_probs=129.8
Q ss_pred cCCC-CCccceEeeeeeeeEEEe-ec----------CceEEEEeCCCcccccCCCCC-cCCCCcccceeeeeeeeecCCC
Q 045569 93 QDLD-NPVRGELVGPYNGIFCIF-GN----------NNRITLWNRATKESRVLPKCT-TVFPKYTSIFCKCTGFGLDPMS 159 (362)
Q Consensus 93 ~~~~-~p~~~~~~~s~~GLl~~~-~~----------~~~~~V~NP~T~~~~~LP~~~-~~~~~~~~~~~~~~~~g~d~~~ 159 (362)
..++ .|......+..+|-|.+. +. ...++++||.|++|..+++.+ .... . .....++.
T Consensus 49 ~~~p~~~R~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~p~~r~-~------~~~~~~~~-- 119 (357)
T 2uvk_A 49 AAFPGGPRDQATSAFIDGNLYVFGGIGKNSEGLTQVFNDVHKYNPKTNSWVKLMSHAPMGMA-G------HVTFVHNG-- 119 (357)
T ss_dssp CCCTTCCCBSCEEEEETTEEEEECCEEECTTSCEEECCCEEEEETTTTEEEECSCCCSSCCS-S------EEEEEETT--
T ss_pred CCCCCCcCccceEEEECCEEEEEcCCCCCCCccceeeccEEEEeCCCCcEEECCCCCCcccc-c------ceEEEECC--
Confidence 3344 343344455566766655 22 236899999999999998866 2221 1 11112221
Q ss_pred CCeEEEEEEEEeeccc-cc-----------------------------ccCcceEEEEECCCCCceecccCCCccccccC
Q 045569 160 TDYKLVLIFTLWNEKL-DL-----------------------------LYEFSHVAVYSLSTNSWRYCDCFKSNHYYMDG 209 (362)
Q Consensus 160 ~~ykVv~~~~~~~~~~-~~-----------------------------~~~~~~~eVyss~~~~W~~~~~~~~~~~~~~~ 209 (362)
|++.++.. .... .. ......+++|+..+++|+.+...+.+...
T Consensus 120 ---~iyv~GG~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~p~~~~~--- 192 (357)
T 2uvk_A 120 ---KAYVTGGV-NQNIFNGYFEDLNEAGKDSTAIDKINAHYFDKKAEDYFFNKFLLSFDPSTQQWSYAGESPWYGTA--- 192 (357)
T ss_dssp ---EEEEEECC-CHHHHHHHHHHHHHHTTCHHHHHHHHHHHHSSCGGGGCCCCEEEEEETTTTEEEEEEECSSCCCB---
T ss_pred ---EEEEEeCc-CCCcCcccccchhhcCCcccchhhhhhhhccccccccCCcccEEEEeCCCCcEEECCCCCCCCcc---
Confidence 55555421 1100 00 01135799999999999998655422111
Q ss_pred CcceEEECceEEEEeeccCC--CccEEEEEEc--CCceeeee-cCCCCCCCCCcEEEEECCeEEEEEEcCC---------
Q 045569 210 AFDSVYLDGVCYWLSEFRDN--DHKVILSFHL--GNEVFEEI-QEPYIPESTPTILGIYNHSLCLLLSHNI--------- 275 (362)
Q Consensus 210 ~~~~v~~~G~lywl~~~~~~--~~~~il~fD~--~~e~~~~i-~~P~~~~~~~~~l~~~~g~L~l~~~~~~--------- 275 (362)
....+.++|.+|.+...... ....+..||+ .+.+|+.+ ++|.........++..+|+|++++....
T Consensus 193 ~~~~~~~~~~iyv~GG~~~~~~~~~~v~~~d~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~ 272 (357)
T 2uvk_A 193 GAAVVNKGDKTWLINGEAKPGLRTDAVFELDFTGNNLKWNKLAPVSSPDGVAGGFAGISNDSLIFAGGAGFKGSRENYQN 272 (357)
T ss_dssp SCEEEEETTEEEEECCEEETTEECCCEEEEECC---CEEEECCCSSTTTCCBSCEEEEETTEEEEECCEECTTHHHHHHT
T ss_pred cccEEEECCEEEEEeeecCCCcccCceEEEEecCCCCcEEecCCCCCCcccccceEEEECCEEEEEcCccccCCcccccc
Confidence 15668889999999753211 1235777876 89999987 3443322211457889999999886321
Q ss_pred ---------CCeEEEEEeeC--CeeEEEEEeCCCCCceeeEEEeeCCcEEEEec-------CCeEEEEeCCCCcEEEee
Q 045569 276 ---------ENYYDIWVMKY--KCWIKQLSLGPLNGVRTPLGFWKKGAFFVHST-------NEQLLLYDPNTQEMRDLG 336 (362)
Q Consensus 276 ---------~~~~~IW~l~~--~~W~~~~~i~~~~~~~~~~~~~~~g~il~~~~-------~~~~~~yd~~~~~~~~v~ 336 (362)
...-++|+.+- ..|.++..++... .. ..++.-+++|++..+ ...+..+++++++|.+..
T Consensus 273 g~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r-~~-~~~~~~~~~i~v~GG~~~~~~~~~~v~~l~~~~~~~~~~~ 349 (357)
T 2uvk_A 273 GKNYAHEGLKKSYSTDIHLWHNGKWDKSGELSQGR-AY-GVSLPWNNSLLIIGGETAGGKAVTDSVLITVKDNKVTVQN 349 (357)
T ss_dssp TCSSTTTTCCCEECCEEEECC---CEEEEECSSCC-BS-SEEEEETTEEEEEEEECGGGCEEEEEEEEEC-CCSCEEEC
T ss_pred cceeccccccceeeEEEEecCCCceeeCCCCCCCc-cc-ceeEEeCCEEEEEeeeCCCCCEeeeEEEEEEcCcEeEeee
Confidence 11234555554 8999987766432 22 223344788888764 135888999999987654
No 19
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=98.82 E-value=1.5e-06 Score=81.16 Aligned_cols=46 Identities=15% Similarity=0.240 Sum_probs=40.7
Q ss_pred CCCcchHHHHHHHHccCCccccccccccccchhhhhCC-hHHHHHHh
Q 045569 5 GDEHFLEETIIEILSKLPVKSLLRFRCICKSWCALFNK-HNFISKHL 50 (362)
Q Consensus 5 ~~~~LP~Dll~eIL~rLP~ksl~r~r~VcK~W~~li~~-~~F~~~~~ 50 (362)
.++.||+|++.+||+.||+++|+++..|||+|+.++.+ +..-+.+.
T Consensus 14 ~~~~lp~~~~~~i~~~l~~~~l~~~~~v~~~w~~~~~~~~~~w~~~~ 60 (464)
T 3v7d_B 14 LITSLPFEISLKIFNYLQFEDIINSLGVSQNWNKIIRKSTSLWKKLL 60 (464)
T ss_dssp HHHHSCHHHHHHHHTTSCHHHHHHHHTTCHHHHHHHTTCHHHHHHHH
T ss_pred ChHHCCHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHcCCHHHHHHHH
Confidence 35679999999999999999999999999999999998 76665544
No 20
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=98.72 E-value=1.4e-06 Score=80.73 Aligned_cols=287 Identities=13% Similarity=0.045 Sum_probs=137.8
Q ss_pred CCCcchHH----HHHHHHccCCccccccccccccchhhhhCChHHHHHHhhccCCC-----------CceeeEEeeecCC
Q 045569 5 GDEHFLEE----TIIEILSKLPVKSLLRFRCICKSWCALFNKHNFISKHLNNDHNT-----------RLIVHYMEKFDGP 69 (362)
Q Consensus 5 ~~~~LP~D----ll~eIL~rLP~ksl~r~r~VcK~W~~li~~~~F~~~~~~~~~~~-----------~~~~~ll~~~~~~ 69 (362)
.++.||+| ++..||+.|++++|.++.+|||+|+.++.++.+-+....+.... ....+++......
T Consensus 10 ~~~~lp~e~~~~~~~~i~~~l~~~~l~~~~~v~~~w~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~ 89 (435)
T 1p22_A 10 FITALPARGLDHIAENILSYLDAKSLCAAELVCKEWYRVTSDGMLWKKLIERMVRTDSLWRGLAERRGWGQYLFKNKPPD 89 (435)
T ss_dssp HHHHTGGGTCHHHHHHHHTTCCHHHHHHHHHHCHHHHHHHHHTTHHHHHHHHHHTSCHHHHHHHHSSSGGGGCC------
T ss_pred hHHHCCcchHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcChHHHHHHHHhhcCcchhhhhhhhccchhhhhhccCCCC
Confidence 45679999 99999999999999999999999999999887666544332100 0000111000000
Q ss_pred ---CCCccceeeee--------cCCCCccc-ccCccCC---C-CCccceEeeeeeeeEEEeecCceEEEEeCCCcccccC
Q 045569 70 ---DESSYPLFLCS--------LFPDETLT-NLSLQDL---D-NPVRGELVGPYNGIFCIFGNNNRITLWNRATKESRVL 133 (362)
Q Consensus 70 ---~~~~~~~~~~~--------~~~~~~~~-~~~~~~~---~-~p~~~~~~~s~~GLl~~~~~~~~~~V~NP~T~~~~~L 133 (362)
......-.++. +. ..+.. ......+ . .......++..+.++...+.++.+.|||..|++....
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~-~~W~~~~~~~~~~~~~~~~~~~v~~~~~d~~~l~~g~~dg~i~iwd~~~~~~~~~ 168 (435)
T 1p22_A 90 GNAPPNSFYRALYPKIIQDIETIE-SNWRCGRHSLQRIHCRSETSKGVYCLQYDDQKIVSGLRDNTIKIWDKNTLECKRI 168 (435)
T ss_dssp ---CCSHHHHHHHHHHHHHHHHHH-HHTTTCCCCCCCEECCCSSCCCEEEEECCSSEEEEEESSSCEEEEESSSCCEEEE
T ss_pred CCCCchhhHHhhhhhhhcchhHHH-hhhccCCccceEEecccCCCCcEEEEEECCCEEEEEeCCCeEEEEeCCCCeEEEE
Confidence 00000000000 00 00000 0000000 0 0011333344444555556666799999998875432
Q ss_pred CCCCcCCCCcccceeeeeeeeecCCCCCeEEEEEEEEeecccccccCcceEEEEECCCCCceecccCCCccccccCCcce
Q 045569 134 PKCTTVFPKYTSIFCKCTGFGLDPMSTDYKLVLIFTLWNEKLDLLYEFSHVAVYSLSTNSWRYCDCFKSNHYYMDGAFDS 213 (362)
Q Consensus 134 P~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~eVyss~~~~W~~~~~~~~~~~~~~~~~~~ 213 (362)
-.... .. ...+.+|. ++ ++... . ...+.|++..++.-... ...+.. .-.+
T Consensus 169 ~~~h~---~~------v~~l~~~~---~~-l~sg~---~--------dg~i~vwd~~~~~~~~~--~~~h~~----~v~~ 218 (435)
T 1p22_A 169 LTGHT---GS------VLCLQYDE---RV-IITGS---S--------DSTVRVWDVNTGEMLNT--LIHHCE----AVLH 218 (435)
T ss_dssp ECCCS---SC------EEEEECCS---SE-EEEEE---T--------TSCEEEEESSSCCEEEE--ECCCCS----CEEE
T ss_pred EcCCC---Cc------EEEEEECC---CE-EEEEc---C--------CCeEEEEECCCCcEEEE--EcCCCC----cEEE
Confidence 21111 11 34555532 22 22221 1 13588999887643211 100010 1233
Q ss_pred EEECceEEEEeeccCCCccEEEEEEcCCceeee-ecCCCCCCCCCcEEEEECCeEEEEEEcCCCCeEEEEEeeCCeeEEE
Q 045569 214 VYLDGVCYWLSEFRDNDHKVILSFHLGNEVFEE-IQEPYIPESTPTILGIYNHSLCLLLSHNIENYYDIWVMKYKCWIKQ 292 (362)
Q Consensus 214 v~~~G~lywl~~~~~~~~~~il~fD~~~e~~~~-i~~P~~~~~~~~~l~~~~g~L~l~~~~~~~~~~~IW~l~~~~W~~~ 292 (362)
+..++........ ...|..+|+.+..-.. ....... .........+|...+++. ....+.||-++... ..
T Consensus 219 l~~~~~~l~s~s~----dg~i~vwd~~~~~~~~~~~~~~~~-~~~v~~~~~~~~~l~s~~--~dg~i~vwd~~~~~--~~ 289 (435)
T 1p22_A 219 LRFNNGMMVTCSK----DRSIAVWDMASPTDITLRRVLVGH-RAAVNVVDFDDKYIVSAS--GDRTIKVWNTSTCE--FV 289 (435)
T ss_dssp EECCTTEEEEEET----TSCEEEEECSSSSCCEEEEEECCC-SSCEEEEEEETTEEEEEE--TTSEEEEEETTTCC--EE
T ss_pred EEEcCCEEEEeeC----CCcEEEEeCCCCCCceeeeEecCC-CCcEEEEEeCCCEEEEEe--CCCeEEEEECCcCc--EE
Confidence 4444543333332 3468888987654321 1111111 111233334666655555 46789999987632 33
Q ss_pred EEeCCCCCceeeEEEeeCCcEEEE-ecCCeEEEEeCCCCcEE
Q 045569 293 LSLGPLNGVRTPLGFWKKGAFFVH-STNEQLLLYDPNTQEMR 333 (362)
Q Consensus 293 ~~i~~~~~~~~~~~~~~~g~il~~-~~~~~~~~yd~~~~~~~ 333 (362)
..+..... ...++.-++..++. ..++.+..||.++++..
T Consensus 290 ~~~~~~~~--~v~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~ 329 (435)
T 1p22_A 290 RTLNGHKR--GIACLQYRDRLVVSGSSDNTIRLWDIECGACL 329 (435)
T ss_dssp EEEECCSS--CEEEEEEETTEEEEEETTSCEEEEETTTCCEE
T ss_pred EEEcCCCC--cEEEEEeCCCEEEEEeCCCeEEEEECCCCCEE
Confidence 33332111 11122224455444 45788999999987643
No 21
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=98.47 E-value=6.3e-06 Score=80.85 Aligned_cols=195 Identities=11% Similarity=0.036 Sum_probs=116.1
Q ss_pred eEEEEeCCCcccccCCCCCcCCCCcccceeeeeeeeecCCCCCeEEEEEEEEeecccccccCcceEEEEECCCCCceecc
Q 045569 119 RITLWNRATKESRVLPKCTTVFPKYTSIFCKCTGFGLDPMSTDYKLVLIFTLWNEKLDLLYEFSHVAVYSLSTNSWRYCD 198 (362)
Q Consensus 119 ~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~eVyss~~~~W~~~~ 198 (362)
.+.++||.|++|..++..+...... ..+..+.. +=+++.++. . . ...+++|+..++.|..+.
T Consensus 220 ~~~~yd~~t~~w~~~~~~~~~~~~~------~~~~~~~~---~g~lyv~GG-~--~------~~~v~~yd~~t~~W~~~~ 281 (656)
T 1k3i_A 220 LTSSWDPSTGIVSDRTVTVTKHDMF------CPGISMDG---NGQIVVTGG-N--D------AKKTSLYDSSSDSWIPGP 281 (656)
T ss_dssp EEEEECTTTCCBCCCEEEECSCCCS------SCEEEECT---TSCEEEECS-S--S------TTCEEEEEGGGTEEEECC
T ss_pred EEEEEeCCCCcEEeCcccCCCCCCc------cccccCCC---CCCEEEeCC-C--C------CCceEEecCcCCceeECC
Confidence 5789999999999988765432221 11222111 124555431 0 1 126999999999999987
Q ss_pred cCCCccccccCCcceEEE-CceEEEEeecc--CCCccEEEEEEcCCceeeeec------CCCCCC-------C-------
Q 045569 199 CFKSNHYYMDGAFDSVYL-DGVCYWLSEFR--DNDHKVILSFHLGNEVFEEIQ------EPYIPE-------S------- 255 (362)
Q Consensus 199 ~~~~~~~~~~~~~~~v~~-~G~lywl~~~~--~~~~~~il~fD~~~e~~~~i~------~P~~~~-------~------- 255 (362)
.++.... ....+.+ +|++|.+.... ......+..||+.+++|+.++ +|.... .
T Consensus 282 ~~~~~R~----~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~W~~~~~~~~~p~~~~~~~~~~~~~~~iyv~Gg 357 (656)
T 1k3i_A 282 DMQVARG----YQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTWTSLPNAKVNPMLTADKQGLYRSDNHAWLFGW 357 (656)
T ss_dssp CCSSCCS----SCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTEEEEETTSCSGGGCCCCTTGGGTTTCSCCEEEC
T ss_pred CCCcccc----ccceEEecCCeEEEEeCcccCCcccccceEeCCCCCcceeCCCccccccccccccceeecCCceEEEEC
Confidence 6543222 1455677 99999998632 112346899999999999862 332210 0
Q ss_pred ----------------------------------------CCcEEEE----ECCeEEEEEEcCC-------CCeEEEEEe
Q 045569 256 ----------------------------------------TPTILGI----YNHSLCLLLSHNI-------ENYYDIWVM 284 (362)
Q Consensus 256 ----------------------------------------~~~~l~~----~~g~L~l~~~~~~-------~~~~~IW~l 284 (362)
.....++ .+|+|++++.... .....|++.
T Consensus 358 ~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~~~~~~~~~~~~~~~~av~~~~~~~~i~v~GG~~~~~~~~~~~~~~~v~~y 437 (656)
T 1k3i_A 358 KKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDAMCGNAVMYDAVKGKILTFGGSPDYQDSDATTNAHIITLG 437 (656)
T ss_dssp GGGCEEECCSSSEEEEEECSTTCEEEEEEECEETTEECCCCBTCEEEEEETTTTEEEEECCBSSSSSSBCCCCEEEEECC
T ss_pred CCCcEEEecCccceeeeecCCcceeecCCccccccccCCCCCCCceEeccCCCCeEEEEeCCCCCCCCCcCCcceEEEcC
Confidence 0000111 3788888876321 112245554
Q ss_pred eC--CeeEEEE--EeCCCCCceeeEEEeeCCcEEEEecC------------CeEEEEeCCCCcEEEee
Q 045569 285 KY--KCWIKQL--SLGPLNGVRTPLGFWKKGAFFVHSTN------------EQLLLYDPNTQEMRDLG 336 (362)
Q Consensus 285 ~~--~~W~~~~--~i~~~~~~~~~~~~~~~g~il~~~~~------------~~~~~yd~~~~~~~~v~ 336 (362)
+. ..|.+.. .++.. .......+..+|+||+..+. ..+..||+++++|+.+.
T Consensus 438 d~~~~~W~~~~~~~mp~~-R~~~~~~~l~~g~i~v~GG~~~~~~~~~~~~~~~v~~ydp~t~~W~~~~ 504 (656)
T 1k3i_A 438 EPGTSPNTVFASNGLYFA-RTFHTSVVLPDGSTFITGGQRRGIPFEDSTPVFTPEIYVPEQDTFYKQN 504 (656)
T ss_dssp STTSCCEEEECTTCCSSC-CBSCEEEECTTSCEEEECCBSBCCTTCCCSBCCCCEEEEGGGTEEEECC
T ss_pred CCCCCCeeEEccCCCCCC-cccCCeEECCCCCEEEECCcccCcCcCCCCcccceEEEcCCCCceeecC
Confidence 43 7898775 33321 22233344457889887641 45899999999998765
No 22
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=98.19 E-value=2e-05 Score=77.68 Aligned_cols=153 Identities=4% Similarity=-0.044 Sum_probs=99.3
Q ss_pred cceEEEEECCCCCceecc-cCC-CccccccCCcceEEE--CceEEEEeeccCCC--ccEEEEEEcCCceeeee-cCCCCC
Q 045569 181 FSHVAVYSLSTNSWRYCD-CFK-SNHYYMDGAFDSVYL--DGVCYWLSEFRDND--HKVILSFHLGNEVFEEI-QEPYIP 253 (362)
Q Consensus 181 ~~~~eVyss~~~~W~~~~-~~~-~~~~~~~~~~~~v~~--~G~lywl~~~~~~~--~~~il~fD~~~e~~~~i-~~P~~~ 253 (362)
...+++|+..+++|+.+. ..+ ...+.-......+.+ +|.+|.+....... ...+..||+.+.+|+.+ ++|...
T Consensus 411 ~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd~~t~~W~~~~~~p~~R 490 (695)
T 2zwa_A 411 VNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRKAPHQGLSDNWIFDMKTREWSMIKSLSHTR 490 (695)
T ss_dssp CCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTTTEEEEECCBSSTTCBCCCCEEEETTTTEEEECCCCSBCC
T ss_pred cCcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEccCCEEEEEcCCCCCCCccccEEEEeCCCCcEEECCCCCCCc
Confidence 346999999999999987 421 011111112667888 99999998654211 24589999999999988 455433
Q ss_pred CCCCcEEEEE-CCeEEEEEEcCCCCeEEEEEeeC--CeeEEEEEeCC--CCCceeeEEEee-C-CcEEEEecC-------
Q 045569 254 ESTPTILGIY-NHSLCLLLSHNIENYYDIWVMKY--KCWIKQLSLGP--LNGVRTPLGFWK-K-GAFFVHSTN------- 319 (362)
Q Consensus 254 ~~~~~~l~~~-~g~L~l~~~~~~~~~~~IW~l~~--~~W~~~~~i~~--~~~~~~~~~~~~-~-g~il~~~~~------- 319 (362)
.. ...+.. +|+|++++...... ++|+.+- ..|+....... .........+.+ + ++||+..+.
T Consensus 491 ~~--h~~~~~~~~~iyv~GG~~~~~--~v~~yd~~t~~W~~~~~~g~~p~~r~~~~a~v~~~~~~~iyv~GG~~~~~~~~ 566 (695)
T 2zwa_A 491 FR--HSACSLPDGNVLILGGVTEGP--AMLLYNVTEEIFKDVTPKDEFFQNSLVSAGLEFDPVSKQGIILGGGFMDQTTV 566 (695)
T ss_dssp BS--CEEEECTTSCEEEECCBCSSC--SEEEEETTTTEEEECCCSSGGGGSCCBSCEEEEETTTTEEEEECCBCTTSSCB
T ss_pred cc--ceEEEEcCCEEEEECCCCCCC--CEEEEECCCCceEEccCCCCCCCcccceeEEEEeCCCCEEEEECCcCCCCCee
Confidence 22 355664 99999998864333 7777765 89998765221 111222222322 2 678887642
Q ss_pred -CeEEEEeCCCCc------EEEeeE
Q 045569 320 -EQLLLYDPNTQE------MRDLGR 337 (362)
Q Consensus 320 -~~~~~yd~~~~~------~~~v~~ 337 (362)
..+..||+++++ |+.+.-
T Consensus 567 ~~~v~~yd~~~~~w~~~~~W~~~~~ 591 (695)
T 2zwa_A 567 SDKAIIFKYDAENATEPITVIKKLQ 591 (695)
T ss_dssp CCEEEEEEECTTCSSCCEEEEEEEE
T ss_pred eCcEEEEEccCCccccceEEEEcCC
Confidence 459999999999 777653
No 23
>3l2o_B F-box only protein 4; small G protein fold, UBL conjugation pathway, ubiquitin Pro ligase, protein binding-cell cycle complex; 2.80A {Homo sapiens}
Probab=98.06 E-value=9.2e-07 Score=75.75 Aligned_cols=50 Identities=16% Similarity=0.105 Sum_probs=46.3
Q ss_pred CCcchHHHHHHHHccCCccccccccccccchhhhhCChHHHHHHhhccCC
Q 045569 6 DEHFLEETIIEILSKLPVKSLLRFRCICKSWCALFNKHNFISKHLNNDHN 55 (362)
Q Consensus 6 ~~~LP~Dll~eIL~rLP~ksl~r~r~VcK~W~~li~~~~F~~~~~~~~~~ 55 (362)
+++||+|++..||+.|++++|.++.+|||+||.+.+++..-+.++.+..+
T Consensus 5 l~~LP~ei~l~IlsfL~p~DL~~l~~vcr~Wr~la~D~~LWr~~l~rd~~ 54 (312)
T 3l2o_B 5 LTRLPIDVQLYILSFLSPHDLCQLGSTNHYWNETVRDPILWRYFLLRDLP 54 (312)
T ss_dssp HHHSCHHHHHHHHHTSCHHHHHHHHTTCHHHHHHHTCHHHHHHHHHSSGG
T ss_pred hHhCCHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhccchHHHHHHhccCC
Confidence 67899999999999999999999999999999999999999988877643
No 24
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=98.04 E-value=6.8e-05 Score=73.46 Aligned_cols=197 Identities=10% Similarity=-0.008 Sum_probs=111.9
Q ss_pred EEEEeCCCcccccCCCCCcCCCCcccceeeeeeeeecCCCCCeEEEEEEEEeecccc-cccCcceEEEEECCCCCceecc
Q 045569 120 ITLWNRATKESRVLPKCTTVFPKYTSIFCKCTGFGLDPMSTDYKLVLIFTLWNEKLD-LLYEFSHVAVYSLSTNSWRYCD 198 (362)
Q Consensus 120 ~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~-~~~~~~~~eVyss~~~~W~~~~ 198 (362)
+...+|.+++|..+++.+... . ...+ -+. +=|++.++........ .......+++|+..+++|+.+.
T Consensus 168 ~~~~dp~~~~W~~~~~~P~~~--~------~~av--~~~--~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~ 235 (656)
T 1k3i_A 168 YTAPQPGLGRWGPTIDLPIVP--A------AAAI--EPT--SGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRT 235 (656)
T ss_dssp CCCCCTTSCEEEEEEECSSCC--S------EEEE--ETT--TTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCE
T ss_pred cccCCCCCCeeeeeccCCCCc--e------eEEE--Eec--CCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCc
Confidence 445689999999877665411 1 1222 221 1255555421111100 0011236899999999999886
Q ss_pred cCCCccccccCCcceEEECceEEEEeeccCCCccEEEEEEcCCceeeee-cCCCCCCCCCcEEEEE-CCeEEEEEEcC--
Q 045569 199 CFKSNHYYMDGAFDSVYLDGVCYWLSEFRDNDHKVILSFHLGNEVFEEI-QEPYIPESTPTILGIY-NHSLCLLLSHN-- 274 (362)
Q Consensus 199 ~~~~~~~~~~~~~~~v~~~G~lywl~~~~~~~~~~il~fD~~~e~~~~i-~~P~~~~~~~~~l~~~-~g~L~l~~~~~-- 274 (362)
..+.+..... ....+..+|.+|...... ...+..||+.+++|..+ ++|..... ...+.+ +|+|++++...
T Consensus 236 ~~~~~~~~~~-~~~~~~~~g~lyv~GG~~---~~~v~~yd~~t~~W~~~~~~~~~R~~--~s~~~~~dg~iyv~GG~~~~ 309 (656)
T 1k3i_A 236 VTVTKHDMFC-PGISMDGNGQIVVTGGND---AKKTSLYDSSSDSWIPGPDMQVARGY--QSSATMSDGRVFTIGGSWSG 309 (656)
T ss_dssp EEECSCCCSS-CEEEECTTSCEEEECSSS---TTCEEEEEGGGTEEEECCCCSSCCSS--CEEEECTTSCEEEECCCCCS
T ss_pred ccCCCCCCcc-ccccCCCCCCEEEeCCCC---CCceEEecCcCCceeECCCCCccccc--cceEEecCCeEEEEeCcccC
Confidence 5543222110 012234689999998654 23699999999999987 34443222 456777 99999998732
Q ss_pred --CCCeEEEEEeeCCeeEEEEE-----eCCCCC--c----eeeEEEe-eCCcEEEEecCCeEEEEeCCCCcEEE
Q 045569 275 --IENYYDIWVMKYKCWIKQLS-----LGPLNG--V----RTPLGFW-KKGAFFVHSTNEQLLLYDPNTQEMRD 334 (362)
Q Consensus 275 --~~~~~~IW~l~~~~W~~~~~-----i~~~~~--~----~~~~~~~-~~g~il~~~~~~~~~~yd~~~~~~~~ 334 (362)
....+++|-.+...|+.+.. +..... . .....+. .+|.++.......+..||+++++|..
T Consensus 310 ~~~~~~~e~yd~~t~~W~~~~~~~~~p~~~~~~~~~~~~~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~ 383 (656)
T 1k3i_A 310 GVFEKNGEVYSPSSKTWTSLPNAKVNPMLTADKQGLYRSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVK 383 (656)
T ss_dssp SSCCCCEEEEETTTTEEEEETTSCSGGGCCCCTTGGGTTTCSCCEEECGGGCEEECCSSSEEEEEECSTTCEEE
T ss_pred CcccccceEeCCCCCcceeCCCccccccccccccceeecCCceEEEECCCCcEEEecCccceeeeecCCcceee
Confidence 12456666665688988621 111100 0 1111111 23444443345679999999998764
No 25
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=97.64 E-value=1.4e-05 Score=71.35 Aligned_cols=42 Identities=24% Similarity=0.482 Sum_probs=38.4
Q ss_pred cCCCcchHHHHHHHHccCCccccccccccccchhhhhCChHH
Q 045569 4 TGDEHFLEETIIEILSKLPVKSLLRFRCICKSWCALFNKHNF 45 (362)
Q Consensus 4 ~~~~~LP~Dll~eIL~rLP~ksl~r~r~VcK~W~~li~~~~F 45 (362)
..|+.||+|++.+||.+|+.+++.+++.|||+|+.++.+|..
T Consensus 7 ~~~~~LP~eil~~If~~L~~~d~~~~~~vc~~W~~~~~~~~~ 48 (336)
T 2ast_B 7 VSWDSLPDELLLGIFSCLCLPELLKVSGVCKRWYRLASDESL 48 (336)
T ss_dssp CCSSSSCHHHHHHHHTTSCHHHHHHTTSSCHHHHHHHTCSTT
T ss_pred CChhhCCHHHHHHHHHhCCHHHHHHHHHHHHHHHHHhcCchh
Confidence 347899999999999999999999999999999999877664
No 26
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=97.46 E-value=2.5e-05 Score=75.38 Aligned_cols=39 Identities=26% Similarity=0.370 Sum_probs=29.5
Q ss_pred CCCcCCCcchHHHHHHHHccCC-ccccccccccccchhhh
Q 045569 1 MMMTGDEHFLEETIIEILSKLP-VKSLLRFRCICKSWCAL 39 (362)
Q Consensus 1 ~m~~~~~~LP~Dll~eIL~rLP-~ksl~r~r~VcK~W~~l 39 (362)
|....|+.||+|++.+||++|| .+++.+++.|||+|+.+
T Consensus 1 ~~~d~~~~LPdevL~~If~~L~~~~d~~~~s~vck~W~~~ 40 (594)
T 2p1m_B 1 MQKRIALSFPEEVLEHVFSFIQLDKDRNSVSLVCKSWYEI 40 (594)
T ss_dssp ---------CHHHHHHHHHTCCCHHHHHHHHTSCHHHHHH
T ss_pred CcccchhhCCHHHHHHHHhhcCCchhHHHHHHHHHHHHHh
Confidence 5567899999999999999999 99999999999999988
No 27
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=96.48 E-value=0.00067 Score=65.34 Aligned_cols=33 Identities=12% Similarity=0.376 Sum_probs=31.5
Q ss_pred CcchHHHHHHHHccC-Cccccccccccccchhhh
Q 045569 7 EHFLEETIIEILSKL-PVKSLLRFRCICKSWCAL 39 (362)
Q Consensus 7 ~~LP~Dll~eIL~rL-P~ksl~r~r~VcK~W~~l 39 (362)
..||||++.+||.+| |.+++.+++.|||+|+.+
T Consensus 14 ~~LPdeil~~I~~~L~~~~d~~~~s~vck~W~~~ 47 (592)
T 3ogk_B 14 VATVDDVIEQVMTYITDPKDRDSASLVCRRWFKI 47 (592)
T ss_dssp CCCGGGTHHHHHTTCCCHHHHHHHTTSCHHHHHH
T ss_pred CCCCHHHHHHHHHhcCCHHHHHHHHHHhHHHHHh
Confidence 479999999999999 899999999999999987
No 28
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=95.49 E-value=1.2 Score=39.03 Aligned_cols=138 Identities=7% Similarity=0.108 Sum_probs=73.7
Q ss_pred eEEEEECCCCCceecccCCCccccccCCcceEEEC----ceEEEEeeccCCCccEEEEEEcCCcee-eeecCCCCCCCCC
Q 045569 183 HVAVYSLSTNSWRYCDCFKSNHYYMDGAFDSVYLD----GVCYWLSEFRDNDHKVILSFHLGNEVF-EEIQEPYIPESTP 257 (362)
Q Consensus 183 ~~eVyss~~~~W~~~~~~~~~~~~~~~~~~~v~~~----G~lywl~~~~~~~~~~il~fD~~~e~~-~~i~~P~~~~~~~ 257 (362)
.+.+++..++.|..+......... -..+.+. |.+...... ...|..+|+.+..- ..+.+...... .
T Consensus 80 ~v~iwd~~~~~~~~~~~~~~~~~~----v~~~~~~~~~~~~~l~~~~~----d~~i~v~d~~~~~~~~~~~~~~~~~~-v 150 (379)
T 3jrp_A 80 KVLIWKEENGRWSQIAVHAVHSAS----VNSVQWAPHEYGPLLLVASS----DGKVSVVEFKENGTTSPIIIDAHAIG-V 150 (379)
T ss_dssp CEEEEEEETTEEEEEEEECCCSSC----EEEEEECCGGGCSEEEEEET----TSEEEEEECCTTSCCCEEEEECCTTC-E
T ss_pred EEEEEEcCCCceeEeeeecCCCcc----eEEEEeCCCCCCCEEEEecC----CCcEEEEecCCCCceeeEEecCCCCc-e
Confidence 588999988887655433211110 1222222 333333322 23688888876522 11111111110 0
Q ss_pred cEEEEE--------------CCeEEEEEEcCCCCeEEEEEeeC--CeeEEEEEeCCCCCceeeEEEeeC---CcEEEEe-
Q 045569 258 TILGIY--------------NHSLCLLLSHNIENYYDIWVMKY--KCWIKQLSLGPLNGVRTPLGFWKK---GAFFVHS- 317 (362)
Q Consensus 258 ~~l~~~--------------~g~L~l~~~~~~~~~~~IW~l~~--~~W~~~~~i~~~~~~~~~~~~~~~---g~il~~~- 317 (362)
..+... +|.+.+++. ....+.||-+.. ..|.....+.........+.+..+ +.+++..
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~--~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~ 228 (379)
T 3jrp_A 151 NSASWAPATIEEDGEHNGTKESRKFVTGG--ADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVS 228 (379)
T ss_dssp EEEEECCCC----------CTTCEEEEEE--TTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEE
T ss_pred EEEEEcCccccccccccCCCCCCEEEEEe--CCCeEEEEEecCCCcceeeEEEEecccCcEeEEEECCCCCCCCeEEEEe
Confidence 122222 466666665 357899999986 667777777643332334455555 6666554
Q ss_pred cCCeEEEEeCCCCc
Q 045569 318 TNEQLLLYDPNTQE 331 (362)
Q Consensus 318 ~~~~~~~yd~~~~~ 331 (362)
.++.+..||.+++.
T Consensus 229 ~dg~i~iwd~~~~~ 242 (379)
T 3jrp_A 229 QDRTCIIWTQDNEQ 242 (379)
T ss_dssp TTSCEEEEEESSTT
T ss_pred CCCEEEEEeCCCCC
Confidence 47789999988763
No 29
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=94.96 E-value=1.4 Score=37.07 Aligned_cols=189 Identities=11% Similarity=-0.002 Sum_probs=97.8
Q ss_pred eeeeeEEEe-ecCceEEEEeCCCcccccCCCCCcCCCCcccceeeeeeeeecCCCCCeEEEEEEEEeecccccccCcceE
Q 045569 106 PYNGIFCIF-GNNNRITLWNRATKESRVLPKCTTVFPKYTSIFCKCTGFGLDPMSTDYKLVLIFTLWNEKLDLLYEFSHV 184 (362)
Q Consensus 106 s~~GLl~~~-~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~ 184 (362)
..+|-|.+. .....++++|| +++......+.. ... ..++.+|+..+ +.... .. ...+
T Consensus 107 ~~~g~l~v~~~~~~~i~~~d~-~g~~~~~~~~~~--~~~------~~~i~~~~~g~---l~v~~--~~--------~~~i 164 (299)
T 2z2n_A 107 GPNGDIWFTEMNGNRIGRITD-DGKIREYELPNK--GSY------PSFITLGSDNA---LWFTE--NQ--------NNAI 164 (299)
T ss_dssp CTTSCEEEEETTTTEEEEECT-TCCEEEEECSST--TCC------EEEEEECTTSC---EEEEE--TT--------TTEE
T ss_pred CCCCCEEEEecCCceEEEECC-CCCEEEecCCCC--CCC------CceEEEcCCCC---EEEEe--CC--------CCEE
Confidence 346766666 34556899999 766554332211 111 46777776532 22221 00 1247
Q ss_pred EEEECCCCCceecccCCCccccccCCcceEEE--CceEEEEeeccCCCccEEEEEEcCCceeeeecCCCCCCCCCcEEEE
Q 045569 185 AVYSLSTNSWRYCDCFKSNHYYMDGAFDSVYL--DGVCYWLSEFRDNDHKVILSFHLGNEVFEEIQEPYIPESTPTILGI 262 (362)
Q Consensus 185 eVyss~~~~W~~~~~~~~~~~~~~~~~~~v~~--~G~lywl~~~~~~~~~~il~fD~~~e~~~~i~~P~~~~~~~~~l~~ 262 (362)
.+|+. ++......... ... ...++.+ +|.+|+.... ...|..+|. +.++..+.+|..... ...+..
T Consensus 165 ~~~~~-~g~~~~~~~~~-~~~----~~~~i~~~~~g~l~v~~~~----~~~i~~~~~-~g~~~~~~~~~~~~~-~~~i~~ 232 (299)
T 2z2n_A 165 GRITE-SGDITEFKIPT-PAS----GPVGITKGNDDALWFVEII----GNKIGRITT-SGEITEFKIPTPNAR-PHAITA 232 (299)
T ss_dssp EEECT-TCCEEEEECSS-TTC----CEEEEEECTTSSEEEEETT----TTEEEEECT-TCCEEEEECSSTTCC-EEEEEE
T ss_pred EEEcC-CCcEEEeeCCC-CCC----cceeEEECCCCCEEEEccC----CceEEEECC-CCcEEEEECCCCCCC-ceeEEE
Confidence 77777 66555432111 111 1233444 5787665433 347999999 777777666633221 133443
Q ss_pred -ECCeEEEEEEcCCCCeEEEEEeeCCeeEEEEEeCCCCCceeeEEEeeCCcEEEEecCCeEEEEeCCCCcEE
Q 045569 263 -YNHSLCLLLSHNIENYYDIWVMKYKCWIKQLSLGPLNGVRTPLGFWKKGAFFVHSTNEQLLLYDPNTQEMR 333 (362)
Q Consensus 263 -~~g~L~l~~~~~~~~~~~IW~l~~~~W~~~~~i~~~~~~~~~~~~~~~g~il~~~~~~~~~~yd~~~~~~~ 333 (362)
.+|.|.+... ....+.+|-. +.. ...+.++........+.+ .+|.+++....+.+..||+++++++
T Consensus 233 ~~~g~l~v~~~--~~~~i~~~d~-~g~-~~~~~~~~~~~~~~~i~~-~~g~l~v~~~~~~l~~~~~~~~~~~ 299 (299)
T 2z2n_A 233 GAGIDLWFTEW--GANKIGRLTS-NNI-IEEYPIQIKSAEPHGICF-DGETIWFAMECDKIGKLTLIKDNME 299 (299)
T ss_dssp CSTTCEEEEET--TTTEEEEEET-TTE-EEEEECSSSSCCEEEEEE-CSSCEEEEETTTEEEEEEEC-----
T ss_pred CCCCCEEEecc--CCceEEEECC-CCc-eEEEeCCCCCCccceEEe-cCCCEEEEecCCcEEEEEcCcccCC
Confidence 3678776653 2345555554 232 122223211112334455 7789998866788999999987653
No 30
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=94.71 E-value=2.1 Score=42.27 Aligned_cols=192 Identities=7% Similarity=0.070 Sum_probs=95.7
Q ss_pred EEEeecCceEEEEeCCCcccccCCCCCcCCCCcccceeeeeeeeecCCCCCeEEEEEEEEeecccccccCcceEEEEECC
Q 045569 111 FCIFGNNNRITLWNRATKESRVLPKCTTVFPKYTSIFCKCTGFGLDPMSTDYKLVLIFTLWNEKLDLLYEFSHVAVYSLS 190 (362)
Q Consensus 111 l~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~eVyss~ 190 (362)
|...+.++.+.|||..++....+..... +.. ...++.+.+..+.-.++... . ...+.+++..
T Consensus 24 latg~~dg~I~vwd~~~~~~~~~~~l~~--h~~-----~V~~l~~s~~~~~~~l~s~s---~--------Dg~I~vwd~~ 85 (753)
T 3jro_A 24 LATCSSDKTIKIFEVEGETHKLIDTLTG--HEG-----PVWRVDWAHPKFGTILASCS---Y--------DGKVLIWKEE 85 (753)
T ss_dssp EEEEETTTEEEEEEEETTEEEEEEEECC--CSS-----CEEEEEECCTTSCSEEEEEE---T--------TSCEEEEEEE
T ss_pred EEEEECCCcEEEEecCCCCCccceeccC--CcC-----ceEEEEecCCCCCCEEEEEe---C--------CCeEEEEECC
Confidence 3333555668888876433322211111 111 14566666554333333332 1 1258899988
Q ss_pred CCCceecccCCCccccccCCcceEEEC----ceEEEEeeccCCCccEEEEEEcCCceee-eecCCCCCCCCCcEEEEE--
Q 045569 191 TNSWRYCDCFKSNHYYMDGAFDSVYLD----GVCYWLSEFRDNDHKVILSFHLGNEVFE-EIQEPYIPESTPTILGIY-- 263 (362)
Q Consensus 191 ~~~W~~~~~~~~~~~~~~~~~~~v~~~----G~lywl~~~~~~~~~~il~fD~~~e~~~-~i~~P~~~~~~~~~l~~~-- 263 (362)
++.|..+.....+... -.++.+. |........ ...|..+|+.+..-. ...+...... ...+...
T Consensus 86 ~~~~~~~~~~~~h~~~----V~~v~~sp~~~~~~l~sgs~----dg~I~vwdl~~~~~~~~~~~~~~~~~-v~~l~~~p~ 156 (753)
T 3jro_A 86 NGRWSQIAVHAVHSAS----VNSVQWAPHEYGPLLLVASS----DGKVSVVEFKENGTTSPIIIDAHAIG-VNSASWAPA 156 (753)
T ss_dssp TTEEEEEEEECCCSSC----EEEEEECCGGGCSEEEEEET----TSEEEEEECCSSSCCCCEEEECCSSC-EEEEEECCC
T ss_pred CCcccccccccCCCCC----eEEEEECCCCCCCEEEEEeC----CCcEEEEEeecCCCcceeEeecCCCc-eEEEEecCc
Confidence 8877655433211110 1222222 333333332 236888887765221 1111111000 0122211
Q ss_pred ------------CCeEEEEEEcCCCCeEEEEEeeC--CeeEEEEEeCCCCCceeeEEEeeC---CcEEEEec-CCeEEEE
Q 045569 264 ------------NHSLCLLLSHNIENYYDIWVMKY--KCWIKQLSLGPLNGVRTPLGFWKK---GAFFVHST-NEQLLLY 325 (362)
Q Consensus 264 ------------~g~L~l~~~~~~~~~~~IW~l~~--~~W~~~~~i~~~~~~~~~~~~~~~---g~il~~~~-~~~~~~y 325 (362)
+|.+.+++. ....+.||-+.. ..+.....+.........+.+..+ +.+++... ++.+..|
T Consensus 157 ~~~~~~~~~~~~d~~~l~sgs--~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~~~~l~s~s~Dg~I~iw 234 (753)
T 3jro_A 157 TIEEDGEHNGTKESRKFVTGG--ADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIW 234 (753)
T ss_dssp C---------CGGGCCEEEEE--TTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEESSSCEEEE
T ss_pred ccccccccccCCCCCEEEEEE--CCCeEEEEeccCCcccceeeeeecCCCCcEEEEEeccCCCCCCEEEEEecCCEEEEe
Confidence 355555555 457899999987 566776666643332334455555 66666544 7789999
Q ss_pred eCCCCc
Q 045569 326 DPNTQE 331 (362)
Q Consensus 326 d~~~~~ 331 (362)
|+++++
T Consensus 235 d~~~~~ 240 (753)
T 3jro_A 235 TQDNEQ 240 (753)
T ss_dssp EESSSS
T ss_pred cCCCCC
Confidence 998763
No 31
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=94.36 E-value=2.2 Score=36.47 Aligned_cols=197 Identities=10% Similarity=0.088 Sum_probs=99.4
Q ss_pred eeeEEEe-ecCceEEEEeCCCcccccCCCCCcCCCCcccceeeeeeeeecCCCCCeEEEEEEEEeecccccccCcceEEE
Q 045569 108 NGIFCIF-GNNNRITLWNRATKESRVLPKCTTVFPKYTSIFCKCTGFGLDPMSTDYKLVLIFTLWNEKLDLLYEFSHVAV 186 (362)
Q Consensus 108 ~GLl~~~-~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~eV 186 (362)
+|-|++. ....+++.+||.+++...+..+. . ..++++++..+ -++.. ...+.+
T Consensus 24 ~~~l~~~d~~~~~i~~~d~~~~~~~~~~~~~-----~------~~~i~~~~dG~--l~v~~-------------~~~l~~ 77 (297)
T 3g4e_A 24 SNSLLFVDIPAKKVCRWDSFTKQVQRVTMDA-----P------VSSVALRQSGG--YVATI-------------GTKFCA 77 (297)
T ss_dssp TTEEEEEETTTTEEEEEETTTCCEEEEECSS-----C------EEEEEEBTTSS--EEEEE-------------TTEEEE
T ss_pred CCEEEEEECCCCEEEEEECCCCcEEEEeCCC-----c------eEEEEECCCCC--EEEEE-------------CCeEEE
Confidence 3444444 34557999999998765443221 1 45677777544 22221 125888
Q ss_pred EECCCCCceecccCCCccccccCCcceEEE--CceEEEEeeccC-------CCccEEEEEEcCCceeeeecCCCCCCCCC
Q 045569 187 YSLSTNSWRYCDCFKSNHYYMDGAFDSVYL--DGVCYWLSEFRD-------NDHKVILSFHLGNEVFEEIQEPYIPESTP 257 (362)
Q Consensus 187 yss~~~~W~~~~~~~~~~~~~~~~~~~v~~--~G~lywl~~~~~-------~~~~~il~fD~~~e~~~~i~~P~~~~~~~ 257 (362)
|+..++.++.+.......+.. ....+.+ +|.+|.-..... .....|..+|.... ...+.- .... .
T Consensus 78 ~d~~~g~~~~~~~~~~~~~~~--~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~-~~~~~~--~~~~-p 151 (297)
T 3g4e_A 78 LNWKEQSAVVLATVDNDKKNN--RFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDHH-VKKYFD--QVDI-S 151 (297)
T ss_dssp EETTTTEEEEEEECCTTCSSE--EEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTSC-EEEEEE--EESB-E
T ss_pred EECCCCcEEEEEecCCCCCCC--CCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCCC-EEEEee--cccc-c
Confidence 998888877654322111110 0122333 688665443211 12347888887643 222110 0000 0
Q ss_pred cEEEEE-CCe-EEEEEEcCCCCeEEEEEee-C-CeeEEEE---EeCCCCCceeeEEEeeCCcEEEEec-CCeEEEEeCCC
Q 045569 258 TILGIY-NHS-LCLLLSHNIENYYDIWVMK-Y-KCWIKQL---SLGPLNGVRTPLGFWKKGAFFVHST-NEQLLLYDPNT 329 (362)
Q Consensus 258 ~~l~~~-~g~-L~l~~~~~~~~~~~IW~l~-~-~~W~~~~---~i~~~~~~~~~~~~~~~g~il~~~~-~~~~~~yd~~~ 329 (362)
..++.. +|+ |+++.. ....+.+|.++ + ....... .+........-+++..+|.|++... .+.+..||+++
T Consensus 152 ngi~~spdg~~lyv~~~--~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~~~~~v~~~d~~t 229 (297)
T 3g4e_A 152 NGLDWSLDHKIFYYIDS--LSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVACYNGGRVIRLDPVT 229 (297)
T ss_dssp EEEEECTTSCEEEEEEG--GGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEEEETTTEEEEECTTT
T ss_pred cceEEcCCCCEEEEecC--CCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCEEEEEcCCCEEEEEcCCC
Confidence 123322 454 555544 34566666664 2 3332221 2221112223345556788888764 56799999997
Q ss_pred CcE-EEeeEe
Q 045569 330 QEM-RDLGRK 338 (362)
Q Consensus 330 ~~~-~~v~~~ 338 (362)
+++ ..+...
T Consensus 230 G~~~~~i~~p 239 (297)
T 3g4e_A 230 GKRLQTVKLP 239 (297)
T ss_dssp CCEEEEEECS
T ss_pred ceEEEEEECC
Confidence 664 455543
No 32
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=93.91 E-value=2.5 Score=35.54 Aligned_cols=201 Identities=11% Similarity=0.112 Sum_probs=103.3
Q ss_pred eeeeeEEEe-ecCceEEEEeCCCcccccCCCCCcCCCCcccceeeeeeeeecCCCCCeEEEEEEEEeecccccccCcceE
Q 045569 106 PYNGIFCIF-GNNNRITLWNRATKESRVLPKCTTVFPKYTSIFCKCTGFGLDPMSTDYKLVLIFTLWNEKLDLLYEFSHV 184 (362)
Q Consensus 106 s~~GLl~~~-~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~ 184 (362)
+.+|-+.+. .....+.++||..+....++......... ....++.+++..+. ++... ... ...+
T Consensus 38 ~~~g~l~v~~~~~~~i~~~d~~g~~~~~~~~~~~~~~~~----~~p~~i~~~~~~g~--l~v~~--~~~-------~~~i 102 (286)
T 1q7f_A 38 NAQNDIIVADTNNHRIQIFDKEGRFKFQFGECGKRDSQL----LYPNRVAVVRNSGD--IIVTE--RSP-------THQI 102 (286)
T ss_dssp CTTCCEEEEEGGGTEEEEECTTSCEEEEECCBSSSTTCB----SSEEEEEEETTTTE--EEEEE--CGG-------GCEE
T ss_pred CCCCCEEEEECCCCEEEEECCCCcEEEEecccCCCcccc----cCceEEEEEcCCCe--EEEEc--CCC-------CCEE
Confidence 445666665 44556999999866555555422111000 11456666433332 22221 110 1357
Q ss_pred EEEECCCCCceecccCCCccccccCCcceEEE--CceEEEEeeccCCCccEEEEEEcCCceeeeecCCCCCCCCCcEEEE
Q 045569 185 AVYSLSTNSWRYCDCFKSNHYYMDGAFDSVYL--DGVCYWLSEFRDNDHKVILSFHLGNEVFEEIQEPYIPESTPTILGI 262 (362)
Q Consensus 185 eVyss~~~~W~~~~~~~~~~~~~~~~~~~v~~--~G~lywl~~~~~~~~~~il~fD~~~e~~~~i~~P~~~~~~~~~l~~ 262 (362)
.+|+.....-+.+....... ..++.+ +|.+|..... ...|..||...+....+..+..... ...++.
T Consensus 103 ~~~d~~g~~~~~~~~~~~~~------~~~i~~~~~g~l~v~~~~----~~~i~~~~~~g~~~~~~~~~~~~~~-p~~i~~ 171 (286)
T 1q7f_A 103 QIYNQYGQFVRKFGATILQH------PRGVTVDNKGRIIVVECK----VMRVIIFDQNGNVLHKFGCSKHLEF-PNGVVV 171 (286)
T ss_dssp EEECTTSCEEEEECTTTCSC------EEEEEECTTSCEEEEETT----TTEEEEECTTSCEEEEEECTTTCSS-EEEEEE
T ss_pred EEECCCCcEEEEecCccCCC------ceEEEEeCCCCEEEEECC----CCEEEEEcCCCCEEEEeCCCCccCC-cEEEEE
Confidence 77874433222222111011 223333 6777665433 3479999988776666644322211 123443
Q ss_pred -ECCeEEEEEEcCCCCeEEEEEeeCCeeEEEEEeCCCCCc--eeeEEEeeCCcEEEEec-CC-eEEEEeCCCCcEEEeeE
Q 045569 263 -YNHSLCLLLSHNIENYYDIWVMKYKCWIKQLSLGPLNGV--RTPLGFWKKGAFFVHST-NE-QLLLYDPNTQEMRDLGR 337 (362)
Q Consensus 263 -~~g~L~l~~~~~~~~~~~IW~l~~~~W~~~~~i~~~~~~--~~~~~~~~~g~il~~~~-~~-~~~~yd~~~~~~~~v~~ 337 (362)
.+|.|++... ....+.+|-.+.. ....+...... ..-+++..+|.+++... .+ .+..||.+.+.+..+..
T Consensus 172 ~~~g~l~v~~~--~~~~i~~~~~~g~---~~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~~g~~~~~~~~ 246 (286)
T 1q7f_A 172 NDKQEIFISDN--RAHCVKVFNYEGQ---YLRQIGGEGITNYPIGVGINSNGEILIADNHNNFNLTIFTQDGQLISALES 246 (286)
T ss_dssp CSSSEEEEEEG--GGTEEEEEETTCC---EEEEESCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEECTTSCEEEEEEE
T ss_pred CCCCCEEEEEC--CCCEEEEEcCCCC---EEEEEccCCccCCCcEEEECCCCCEEEEeCCCCEEEEEECCCCCEEEEEcc
Confidence 3578776554 3567777765432 22234322112 23345556788888775 33 89999988776666553
No 33
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=92.16 E-value=5.7 Score=34.79 Aligned_cols=198 Identities=14% Similarity=0.050 Sum_probs=94.5
Q ss_pred eeeeeEEEeecCceEEEEeCCCcccccCCCCCcCCCCcccceeeeeeeeecCCCCCeEEEEEEEEeecccccccCcceEE
Q 045569 106 PYNGIFCIFGNNNRITLWNRATKESRVLPKCTTVFPKYTSIFCKCTGFGLDPMSTDYKLVLIFTLWNEKLDLLYEFSHVA 185 (362)
Q Consensus 106 s~~GLl~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~e 185 (362)
+-+|.|+..+.++.+.|||..+++...........+.. ....+.+.|.. ++ ++... . ...+.
T Consensus 91 s~d~~l~~~s~dg~v~lWd~~~~~~~~~~~~~~~~H~~-----~V~~v~~spdg-~~-l~sgs----~-------d~~i~ 152 (344)
T 4gqb_B 91 VGERGILVASDSGAVELWELDENETLIVSKFCKYEHDD-----IVSTVSVLSSG-TQ-AVSGS----K-------DICIK 152 (344)
T ss_dssp ETTTEEEEEETTSEEEEEEECTTSSCEEEEEEEECCSS-----CEEEEEECTTS-SE-EEEEE----T-------TSCEE
T ss_pred eCCCeEEEEECCCEEEEEeccCCCceeEeeccccCCCC-----CEEEEEECCCC-CE-EEEEe----C-------CCeEE
Confidence 33566665566777999999998765433221111111 14566666643 22 22211 1 12588
Q ss_pred EEECCCCCceecccCCCccccccCCcceEEE--CceEEEEeeccCCCccEEEEEEcCCceee-eecCCCCCCCCCcEEEE
Q 045569 186 VYSLSTNSWRYCDCFKSNHYYMDGAFDSVYL--DGVCYWLSEFRDNDHKVILSFHLGNEVFE-EIQEPYIPESTPTILGI 262 (362)
Q Consensus 186 Vyss~~~~W~~~~~~~~~~~~~~~~~~~v~~--~G~lywl~~~~~~~~~~il~fD~~~e~~~-~i~~P~~~~~~~~~l~~ 262 (362)
+++.+++.=. .....+-. .-..+.+ +|.-+.+.... ...|..+|+.+.+-. .+..+..... ...+..
T Consensus 153 iwd~~~~~~~--~~~~~h~~----~V~~~~~~~~~~~~l~s~s~---D~~v~iwd~~~~~~~~~~~~~~~~~~-~~~~~~ 222 (344)
T 4gqb_B 153 VWDLAQQVVL--SSYRAHAA----QVTCVAASPHKDSVFLSCSE---DNRILLWDTRCPKPASQIGCSAPGYL-PTSLAW 222 (344)
T ss_dssp EEETTTTEEE--EEECCCSS----CEEEEEECSSCTTEEEEEET---TSCEEEEETTSSSCEEECC----CCC-EEEEEE
T ss_pred EEECCCCcEE--EEEcCcCC----ceEEEEecCCCCCceeeecc---ccccccccccccceeeeeecceeecc-ceeeee
Confidence 8888775321 11100000 0111221 23222222221 236888898876543 3332222111 022332
Q ss_pred E--CCeEEEEEEcCCCCeEEEEEeeCCeeEEEEEeCCCCCceeeEEEeeCC-cEEEE-ecCCeEEEEeCCCCcEEEe
Q 045569 263 Y--NHSLCLLLSHNIENYYDIWVMKYKCWIKQLSLGPLNGVRTPLGFWKKG-AFFVH-STNEQLLLYDPNTQEMRDL 335 (362)
Q Consensus 263 ~--~g~L~l~~~~~~~~~~~IW~l~~~~W~~~~~i~~~~~~~~~~~~~~~g-~il~~-~~~~~~~~yd~~~~~~~~v 335 (362)
. ++.+.+.+. ....+.||-++.. ..+..+.........+++..+| .++.. ..++.+.+||.+++++..+
T Consensus 223 ~p~~~~~l~sg~--~dg~v~~wd~~~~--~~~~~~~~h~~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~~~~~~~ 295 (344)
T 4gqb_B 223 HPQQSEVFVFGD--ENGTVSLVDTKST--SCVLSSAVHSQCVTGLVFSPHSVPFLASLSEDCSLAVLDSSLSELFRS 295 (344)
T ss_dssp CSSCTTEEEEEE--TTSEEEEEESCC----CCEEEECCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTCCEEEEE
T ss_pred cCCCCcceEEec--cCCcEEEEECCCC--cEEEEEcCCCCCEEEEEEccCCCeEEEEEeCCCeEEEEECCCCcEEEE
Confidence 2 455655554 4578999988662 1222332211222344555565 44443 4478899999999876543
No 34
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=92.02 E-value=6.5 Score=35.23 Aligned_cols=195 Identities=8% Similarity=0.086 Sum_probs=94.7
Q ss_pred eeeeeEEEeecCceEEEEeCCCcccccCCCCCcCCCCcccceeeeeeeeecCCCCCeEEEEEEEEeecccccccCcceEE
Q 045569 106 PYNGIFCIFGNNNRITLWNRATKESRVLPKCTTVFPKYTSIFCKCTGFGLDPMSTDYKLVLIFTLWNEKLDLLYEFSHVA 185 (362)
Q Consensus 106 s~~GLl~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~e 185 (362)
|.+++|-... ++.++|||..|++...+-...... .. ...+.+.|. +.|-+++- . ...+.
T Consensus 114 S~~n~lAvgl-d~tV~lWd~~tg~~~~~~~~~~~~-~~------V~sv~fspd-g~~lasgs----~--------Dg~v~ 172 (420)
T 4gga_A 114 SSGNVLAVAL-DNSVYLWSASSGDILQLLQMEQPG-EY------ISSVAWIKE-GNYLAVGT----S--------SAEVQ 172 (420)
T ss_dssp CTTSEEEEEE-TTEEEEEETTTCCEEEEEECCSTT-CC------EEEEEECTT-SSEEEEEE----T--------TSCEE
T ss_pred CCCCEEEEEe-CCEEEEEECCCCCEEEEEEecCCC-Cc------EEEEEECCC-CCEEEEEE----C--------CCeEE
Confidence 4567665543 446999999999876543322211 11 456777664 34433321 1 13588
Q ss_pred EEECCCCCceecccCCCccccccCCcceEEECceEEEEeeccCCCccEEEEEEcCCceeeeecCCCCCCCCCcEEE-EEC
Q 045569 186 VYSLSTNSWRYCDCFKSNHYYMDGAFDSVYLDGVCYWLSEFRDNDHKVILSFHLGNEVFEEIQEPYIPESTPTILG-IYN 264 (362)
Q Consensus 186 Vyss~~~~W~~~~~~~~~~~~~~~~~~~v~~~G~lywl~~~~~~~~~~il~fD~~~e~~~~i~~P~~~~~~~~~l~-~~~ 264 (362)
|++..++.-.. ....+-. ...++..+|.+-..... ...+..+|..........+....... ..+. ..+
T Consensus 173 iWd~~~~~~~~--~~~~h~~----~v~~~s~~~~~l~sgs~----d~~i~~~d~~~~~~~~~~~~~h~~~~-~~~~~~~~ 241 (420)
T 4gga_A 173 LWDVQQQKRLR--NMTSHSA----RVGSLSWNSYILSSGSR----SGHIHHHDVRVAEHHVATLSGHSQEV-CGLRWAPD 241 (420)
T ss_dssp EEETTTTEEEE--EECCCSS----CEEEEEEETTEEEEEET----TSEEEEEETTSSSCEEEEEECCSSCE-EEEEECTT
T ss_pred EEEcCCCcEEE--EEeCCCC----ceEEEeeCCCEEEEEeC----CCceeEeeecccceeeEEecccccce-eeeeecCC
Confidence 99988763211 1111111 12334555544333322 34677777665443322222111110 1222 225
Q ss_pred CeEEEEEEcCCCCeEEEEEeeC--CeeEEEEEeCCCCCceeeEEEee-CCcEEEEe---cCCeEEEEeCCCCcEEE
Q 045569 265 HSLCLLLSHNIENYYDIWVMKY--KCWIKQLSLGPLNGVRTPLGFWK-KGAFFVHS---TNEQLLLYDPNTQEMRD 334 (362)
Q Consensus 265 g~L~l~~~~~~~~~~~IW~l~~--~~W~~~~~i~~~~~~~~~~~~~~-~g~il~~~---~~~~~~~yd~~~~~~~~ 334 (362)
|...+.+. ....+.||.... ..+...............+.+.. ++.++... .++.+..||..+++...
T Consensus 242 g~~l~s~~--~D~~v~i~~~~~~~~~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~~~~~ 315 (420)
T 4gga_A 242 GRHLASGG--NDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLS 315 (420)
T ss_dssp SSEEEEEE--TTSCEEEEESSCCSSCSCCSEEECCCSSCEEEEEECTTCTTEEEEEECTTTCEEEEEETTTTEEEE
T ss_pred CCeeeeee--ccccceEEeeccccccceeeeeecccCCceeeeeeCCCcccEEEEEeecCCCEEEEEeCCccccce
Confidence 55544444 457889998876 22222222222111112233332 34454432 26789999999887544
No 35
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=91.78 E-value=6.3 Score=34.57 Aligned_cols=192 Identities=10% Similarity=0.074 Sum_probs=97.0
Q ss_pred eEEEeecCceEEEEeCCCcccccCCCCCcCCCCcccceeeeeeeeecCCCCCeEEEEEEEEeecccccccCcceEEEEEC
Q 045569 110 IFCIFGNNNRITLWNRATKESRVLPKCTTVFPKYTSIFCKCTGFGLDPMSTDYKLVLIFTLWNEKLDLLYEFSHVAVYSL 189 (362)
Q Consensus 110 Ll~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~eVyss 189 (362)
+|...+.++.+.|||..+++....-.... ... ....+.+.|..+.+ +... .. ...+.+++.
T Consensus 88 ~l~s~~~dg~i~iwd~~~~~~~~~~~~~~--h~~-----~v~~~~~~~~~~~~--l~s~---~~-------d~~i~iwd~ 148 (383)
T 3ei3_B 88 TVAVGSKGGDIILWDYDVQNKTSFIQGMG--PGD-----AITGMKFNQFNTNQ--LFVS---SI-------RGATTLRDF 148 (383)
T ss_dssp EEEEEEBTSCEEEEETTSTTCEEEECCCS--TTC-----BEEEEEEETTEEEE--EEEE---ET-------TTEEEEEET
T ss_pred EEEEEcCCCeEEEEeCCCcccceeeecCC--cCC-----ceeEEEeCCCCCCE--EEEE---eC-------CCEEEEEEC
Confidence 44444556669999999887654332211 111 14566666532222 2221 01 135888888
Q ss_pred CCCCceecccCCCccccccCCcceEEECceEEEEeeccCCCccEEEEEEcCCceeeeecCCCCCCCCCcEEEE-ECCe-E
Q 045569 190 STNSWRYCDCFKSNHYYMDGAFDSVYLDGVCYWLSEFRDNDHKVILSFHLGNEVFEEIQEPYIPESTPTILGI-YNHS-L 267 (362)
Q Consensus 190 ~~~~W~~~~~~~~~~~~~~~~~~~v~~~G~lywl~~~~~~~~~~il~fD~~~e~~~~i~~P~~~~~~~~~l~~-~~g~-L 267 (362)
.++..+........-... ..-...-+|........ ...|..+|+..+....+...... ...+.. -+|. +
T Consensus 149 ~~~~~~~~~~~~~~~~~v--~~~~~~~~~~~l~~~~~----d~~i~i~d~~~~~~~~~~~h~~~---v~~~~~~~~~~~~ 219 (383)
T 3ei3_B 149 SGSVIQVFAKTDSWDYWY--CCVDVSVSRQMLATGDS----TGRLLLLGLDGHEIFKEKLHKAK---VTHAEFNPRCDWL 219 (383)
T ss_dssp TSCEEEEEECCCCSSCCE--EEEEEETTTTEEEEEET----TSEEEEEETTSCEEEEEECSSSC---EEEEEECSSCTTE
T ss_pred CCCceEEEeccCCCCCCe--EEEEECCCCCEEEEECC----CCCEEEEECCCCEEEEeccCCCc---EEEEEECCCCCCE
Confidence 876555443321100000 01112223443333322 34788899876655555432211 022332 2444 5
Q ss_pred EEEEEcCCCCeEEEEEeeC--CeeEEEEEeCCCCCceeeEEEee-CCcEEEEe-cCCeEEEEeCCCCcE
Q 045569 268 CLLLSHNIENYYDIWVMKY--KCWIKQLSLGPLNGVRTPLGFWK-KGAFFVHS-TNEQLLLYDPNTQEM 332 (362)
Q Consensus 268 ~l~~~~~~~~~~~IW~l~~--~~W~~~~~i~~~~~~~~~~~~~~-~g~il~~~-~~~~~~~yd~~~~~~ 332 (362)
.+.+. ....+.||-+.. ..-.....+... .....+.+.. ++..++.. .++.+..||+++++.
T Consensus 220 l~s~~--~d~~i~iwd~~~~~~~~~~~~~~~~~-~~v~~~~~s~~~~~~l~~~~~d~~i~iwd~~~~~~ 285 (383)
T 3ei3_B 220 MATSS--VDATVKLWDLRNIKDKNSYIAEMPHE-KPVNAAYFNPTDSTKLLTTDQRNEIRVYSSYDWSK 285 (383)
T ss_dssp EEEEE--TTSEEEEEEGGGCCSTTCEEEEEECS-SCEEEEEECTTTSCEEEEEESSSEEEEEETTBTTS
T ss_pred EEEEe--CCCEEEEEeCCCCCcccceEEEecCC-CceEEEEEcCCCCCEEEEEcCCCcEEEEECCCCcc
Confidence 55554 467999999986 112233333322 2223445555 67666554 478899999987654
No 36
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=91.30 E-value=5.7 Score=33.09 Aligned_cols=113 Identities=11% Similarity=0.086 Sum_probs=72.2
Q ss_pred EEECceEEEEeeccCCCccEEEEEEcCCcee-eeecCCCCCCCCCcEEEEECCeEEEEEEcCCCCeEEEEEeeCCeeEEE
Q 045569 214 VYLDGVCYWLSEFRDNDHKVILSFHLGNEVF-EEIQEPYIPESTPTILGIYNHSLCLLLSHNIENYYDIWVMKYKCWIKQ 292 (362)
Q Consensus 214 v~~~G~lywl~~~~~~~~~~il~fD~~~e~~-~~i~~P~~~~~~~~~l~~~~g~L~l~~~~~~~~~~~IW~l~~~~W~~~ 292 (362)
.+.+|.+|--+... ....|..+|+.+.+- +.+++|..... .-+...+++|+++.- ... .+|+.+-..-.++
T Consensus 27 ~~~~~~LyestG~~--g~S~v~~vD~~tgkv~~~~~l~~~~fg--eGi~~~~~~ly~ltw--~~~--~v~v~D~~tl~~~ 98 (243)
T 3mbr_X 27 FYLRGHLYESTGET--GRSSVRKVDLETGRILQRAEVPPPYFG--AGIVAWRDRLIQLTW--RNH--EGFVYDLATLTPR 98 (243)
T ss_dssp EEETTEEEEEECCT--TSCEEEEEETTTCCEEEEEECCTTCCE--EEEEEETTEEEEEES--SSS--EEEEEETTTTEEE
T ss_pred EEECCEEEEECCCC--CCceEEEEECCCCCEEEEEeCCCCcce--eEEEEeCCEEEEEEe--eCC--EEEEEECCcCcEE
Confidence 45566776655442 245899999998776 56788865422 346667899998764 333 4555555444566
Q ss_pred EEeCCCCCceeeEEEeeC-CcEEEEecCCeEEEEeCCCCcE-EEeeE
Q 045569 293 LSLGPLNGVRTPLGFWKK-GAFFVHSTNEQLLLYDPNTQEM-RDLGR 337 (362)
Q Consensus 293 ~~i~~~~~~~~~~~~~~~-g~il~~~~~~~~~~yd~~~~~~-~~v~~ 337 (362)
.+|+... .+.++..+ +.+++...+..+..+|++|.+. +.+.+
T Consensus 99 ~ti~~~~---~Gwglt~dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V 142 (243)
T 3mbr_X 99 ARFRYPG---EGWALTSDDSHLYMSDGTAVIRKLDPDTLQQVGSIKV 142 (243)
T ss_dssp EEEECSS---CCCEEEECSSCEEEECSSSEEEEECTTTCCEEEEEEC
T ss_pred EEEeCCC---CceEEeeCCCEEEEECCCCeEEEEeCCCCeEEEEEEE
Confidence 6666431 33444444 4567766678899999999765 44554
No 37
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=91.30 E-value=6.7 Score=33.95 Aligned_cols=198 Identities=13% Similarity=0.059 Sum_probs=106.0
Q ss_pred eeeEEEe-e----cCceEEEEeCCCccccc-CCCCCcCCCCcccceeeeeeeeecCCCCCeEEEEEEEEeecccccccCc
Q 045569 108 NGIFCIF-G----NNNRITLWNRATKESRV-LPKCTTVFPKYTSIFCKCTGFGLDPMSTDYKLVLIFTLWNEKLDLLYEF 181 (362)
Q Consensus 108 ~GLl~~~-~----~~~~~~V~NP~T~~~~~-LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~ 181 (362)
+|++.+. + ....+.++||.|++... ++.......-+ ....++.++. .. +.... .. .
T Consensus 2 ~g~~v~neg~~g~~~~~l~~~d~~t~~~~~~i~~~~n~~~lg----~~~~~i~~~~---~~-lyv~~--~~--------~ 63 (328)
T 3dsm_A 2 SGLFITNEGNFQYSNATLSYYDPATCEVENEVFYRANGFKLG----DVAQSMVIRD---GI-GWIVV--NN--------S 63 (328)
T ss_dssp CEEEEEECCCTTSCCBEEEEEETTTTEEECSHHHHHHSSCCB----SCEEEEEEET---TE-EEEEE--GG--------G
T ss_pred CeEEEEecCCCCCCCceEEEEECCCCEEhhhhHhhhcCcccC----ccceEEEEEC---CE-EEEEE--cC--------C
Confidence 4666666 2 25579999999988653 21100000000 0123344442 22 22221 11 1
Q ss_pred ceEEEEECCCCCc-eecccCCCccccccCCcceEEECceEEEEeeccCCCccEEEEEEcCCceee-eecCCCCCCC--CC
Q 045569 182 SHVAVYSLSTNSW-RYCDCFKSNHYYMDGAFDSVYLDGVCYWLSEFRDNDHKVILSFHLGNEVFE-EIQEPYIPES--TP 257 (362)
Q Consensus 182 ~~~eVyss~~~~W-~~~~~~~~~~~~~~~~~~~v~~~G~lywl~~~~~~~~~~il~fD~~~e~~~-~i~~P~~~~~--~~ 257 (362)
..+.|++..++.- +.++... .+. .-.+.-+|.+|..... ...|..+|+.+.+.. .++.+..... ..
T Consensus 64 ~~v~viD~~t~~~~~~i~~~~--~p~----~i~~~~~g~lyv~~~~----~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p 133 (328)
T 3dsm_A 64 HVIFAIDINTFKEVGRITGFT--SPR----YIHFLSDEKAYVTQIW----DYRIFIINPKTYEITGYIECPDMDMESGST 133 (328)
T ss_dssp TEEEEEETTTCCEEEEEECCS--SEE----EEEEEETTEEEEEEBS----CSEEEEEETTTTEEEEEEECTTCCTTTCBC
T ss_pred CEEEEEECcccEEEEEcCCCC--CCc----EEEEeCCCeEEEEECC----CCeEEEEECCCCeEEEEEEcCCccccCCCc
Confidence 3689999988754 2332211 111 1122258888887733 237999999988764 5666551110 11
Q ss_pred cEEEEECCeEEEEEEcCCCCeEEEEEeeCCeeEEEEEeCCCCCceeeEEEeeCCcEEEEecC-----------CeEEEEe
Q 045569 258 TILGIYNHSLCLLLSHNIENYYDIWVMKYKCWIKQLSLGPLNGVRTPLGFWKKGAFFVHSTN-----------EQLLLYD 326 (362)
Q Consensus 258 ~~l~~~~g~L~l~~~~~~~~~~~IW~l~~~~W~~~~~i~~~~~~~~~~~~~~~g~il~~~~~-----------~~~~~yd 326 (362)
..++..+|+|++.... ....+.++-++.....+...+.. ...-+.+..+|++++.... ..+..+|
T Consensus 134 ~~i~~~~~~lyv~~~~-~~~~v~viD~~t~~~~~~i~~g~---~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id 209 (328)
T 3dsm_A 134 EQMVQYGKYVYVNCWS-YQNRILKIDTETDKVVDELTIGI---QPTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRID 209 (328)
T ss_dssp CCEEEETTEEEEEECT-TCCEEEEEETTTTEEEEEEECSS---CBCCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEE
T ss_pred ceEEEECCEEEEEcCC-CCCEEEEEECCCCeEEEEEEcCC---CccceEEcCCCCEEEEECCCccCCccccCCceEEEEE
Confidence 2344478888877541 24566666555444333333321 1233455567888887643 5799999
Q ss_pred CCCCcEE-EeeE
Q 045569 327 PNTQEMR-DLGR 337 (362)
Q Consensus 327 ~~~~~~~-~v~~ 337 (362)
++++++. .+.+
T Consensus 210 ~~t~~v~~~~~~ 221 (328)
T 3dsm_A 210 AETFTVEKQFKF 221 (328)
T ss_dssp TTTTEEEEEEEC
T ss_pred CCCCeEEEEEec
Confidence 9998876 3443
No 38
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=91.13 E-value=6.2 Score=33.27 Aligned_cols=197 Identities=9% Similarity=0.047 Sum_probs=103.8
Q ss_pred eEEEeecCceEEEEeCCCcccccCCCCCcCCCCcccceeeeeeeeecCCCCCeEEEEEEEEeecccccccCcceEEEEEC
Q 045569 110 IFCIFGNNNRITLWNRATKESRVLPKCTTVFPKYTSIFCKCTGFGLDPMSTDYKLVLIFTLWNEKLDLLYEFSHVAVYSL 189 (362)
Q Consensus 110 Ll~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~eVyss 189 (362)
|+........++.+||.++ ...+..+. .. ..++.+|+..+ ++... .. ...+.+|+.
T Consensus 42 l~~~~~~~~~i~~~~~~~~-~~~~~~~~----~~------~~~l~~~~dg~---l~v~~---~~-------~~~i~~~d~ 97 (296)
T 3e5z_A 42 VIFSDVRQNRTWAWSDDGQ-LSPEMHPS----HH------QNGHCLNKQGH---LIACS---HG-------LRRLERQRE 97 (296)
T ss_dssp EEEEEGGGTEEEEEETTSC-EEEEESSC----SS------EEEEEECTTCC---EEEEE---TT-------TTEEEEECS
T ss_pred EEEEeCCCCEEEEEECCCC-eEEEECCC----CC------cceeeECCCCc---EEEEe---cC-------CCeEEEEcC
Confidence 4444445557999999988 54443221 11 46778887543 22221 11 135888888
Q ss_pred CCCCceecccCCCccccccCCcceEEECceEEEEeecc-------------CCCccEEEEEEcCCceeeeecCCCCCCCC
Q 045569 190 STNSWRYCDCFKSNHYYMDGAFDSVYLDGVCYWLSEFR-------------DNDHKVILSFHLGNEVFEEIQEPYIPEST 256 (362)
Q Consensus 190 ~~~~W~~~~~~~~~~~~~~~~~~~v~~~G~lywl~~~~-------------~~~~~~il~fD~~~e~~~~i~~P~~~~~~ 256 (362)
.++..+.+.......+......-.+.-+|.+|...... ......|..+|.. .++..+.-.. ..
T Consensus 98 ~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~~--~~- 173 (296)
T 3e5z_A 98 PGGEWESIADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GTLSAPIRDR--VK- 173 (296)
T ss_dssp TTCCEEEEECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SCEEEEECCC--SS-
T ss_pred CCCcEEEEeeccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-CCEEEeecCC--CC-
Confidence 88876654321111110000011223367776642210 0012479999987 5555442111 11
Q ss_pred CcEEEE-ECCeEEEEEEcCCCCeEEEEEeeC-Cee-EEEEEeCCCCCceeeEEEeeCCcEEEEecCCeEEEEeCCCCcEE
Q 045569 257 PTILGI-YNHSLCLLLSHNIENYYDIWVMKY-KCW-IKQLSLGPLNGVRTPLGFWKKGAFFVHSTNEQLLLYDPNTQEMR 333 (362)
Q Consensus 257 ~~~l~~-~~g~L~l~~~~~~~~~~~IW~l~~-~~W-~~~~~i~~~~~~~~~~~~~~~g~il~~~~~~~~~~yd~~~~~~~ 333 (362)
...++. -+|++. +... ....+.+|.++. +.. .....+........-+++..+|.+++.. .+.+..||++.+.+.
T Consensus 174 ~~gi~~s~dg~~l-v~~~-~~~~i~~~~~~~~g~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~-~~~v~~~~~~g~~~~ 250 (296)
T 3e5z_A 174 PNGLAFLPSGNLL-VSDT-GDNATHRYCLNARGETEYQGVHFTVEPGKTDGLRVDAGGLIWASA-GDGVHVLTPDGDELG 250 (296)
T ss_dssp EEEEEECTTSCEE-EEET-TTTEEEEEEECSSSCEEEEEEEECCSSSCCCSEEEBTTSCEEEEE-TTEEEEECTTSCEEE
T ss_pred CccEEECCCCCEE-EEeC-CCCeEEEEEECCCCcCcCCCeEeeCCCCCCCeEEECCCCCEEEEc-CCeEEEECCCCCEEE
Confidence 122332 356655 4443 456888888874 555 3333332111223345666788998887 788999999877666
Q ss_pred EeeE
Q 045569 334 DLGR 337 (362)
Q Consensus 334 ~v~~ 337 (362)
.+..
T Consensus 251 ~~~~ 254 (296)
T 3e5z_A 251 RVLT 254 (296)
T ss_dssp EEEC
T ss_pred EEEC
Confidence 6654
No 39
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=90.93 E-value=7.8 Score=34.01 Aligned_cols=190 Identities=11% Similarity=0.014 Sum_probs=96.2
Q ss_pred eeeEEEe-ecCceEEEEeCCCcccccCCCCCcCCCCcccceeeeeeeeecCCCCCeEEEEEEEEeecccccccCcceEEE
Q 045569 108 NGIFCIF-GNNNRITLWNRATKESRVLPKCTTVFPKYTSIFCKCTGFGLDPMSTDYKLVLIFTLWNEKLDLLYEFSHVAV 186 (362)
Q Consensus 108 ~GLl~~~-~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~eV 186 (362)
+..|++. .....+.++|+.+++....-... .. ..++.+++..+ +-++.. .. ...+.+
T Consensus 85 g~~l~~~~~~~~~v~v~d~~~~~~~~~~~~~----~~------~~~~~~s~dg~-~l~~~~----~~-------~~~v~~ 142 (391)
T 1l0q_A 85 GKQVYVTNMASSTLSVIDTTSNTVAGTVKTG----KS------PLGLALSPDGK-KLYVTN----NG-------DKTVSV 142 (391)
T ss_dssp SSEEEEEETTTTEEEEEETTTTEEEEEEECS----SS------EEEEEECTTSS-EEEEEE----TT-------TTEEEE
T ss_pred CCEEEEEECCCCEEEEEECCCCeEEEEEeCC----CC------cceEEECCCCC-EEEEEe----CC-------CCEEEE
Confidence 3344444 34567999999998765432211 11 45666766432 222221 11 236888
Q ss_pred EECCCCCceecccCCCccccccCCcceEEECceEEEEeeccCCCccEEEEEEcCCceeee-ecCCCCCCCCCcEEEE-EC
Q 045569 187 YSLSTNSWRYCDCFKSNHYYMDGAFDSVYLDGVCYWLSEFRDNDHKVILSFHLGNEVFEE-IQEPYIPESTPTILGI-YN 264 (362)
Q Consensus 187 yss~~~~W~~~~~~~~~~~~~~~~~~~v~~~G~lywl~~~~~~~~~~il~fD~~~e~~~~-i~~P~~~~~~~~~l~~-~~ 264 (362)
++.+++.....-.... .+. .-...-+|..-++.... ...|..+|+.+.+... +..... ...+.. -+
T Consensus 143 ~d~~~~~~~~~~~~~~-~~~----~~~~~~dg~~l~~~~~~---~~~v~~~d~~~~~~~~~~~~~~~----~~~~~~~~~ 210 (391)
T 1l0q_A 143 INTVTKAVINTVSVGR-SPK----GIAVTPDGTKVYVANFD---SMSISVIDTVTNSVIDTVKVEAA----PSGIAVNPE 210 (391)
T ss_dssp EETTTTEEEEEEECCS-SEE----EEEECTTSSEEEEEETT---TTEEEEEETTTTEEEEEEECSSE----EEEEEECTT
T ss_pred EECCCCcEEEEEecCC-Ccc----eEEECCCCCEEEEEeCC---CCEEEEEECCCCeEEEEEecCCC----ccceEECCC
Confidence 9888775433211100 000 11122245433333332 3478999998876543 332211 122322 24
Q ss_pred CeEEEEEEc-CCCCeEEEEEeeCCeeEEEEEeCCCCCceeeEEEeeCCcEE-EEe-cCCeEEEEeCCCCcEEE
Q 045569 265 HSLCLLLSH-NIENYYDIWVMKYKCWIKQLSLGPLNGVRTPLGFWKKGAFF-VHS-TNEQLLLYDPNTQEMRD 334 (362)
Q Consensus 265 g~L~l~~~~-~~~~~~~IW~l~~~~W~~~~~i~~~~~~~~~~~~~~~g~il-~~~-~~~~~~~yd~~~~~~~~ 334 (362)
|+..++... .....+.+|-++... ....+..... ...+.+..+|+.+ +.. .++.+..||+++++...
T Consensus 211 g~~l~~~~~~~~~~~v~~~d~~~~~--~~~~~~~~~~-~~~~~~s~dg~~l~~s~~~d~~v~v~d~~~~~~~~ 280 (391)
T 1l0q_A 211 GTKAYVTNVDKYFNTVSMIDTGTNK--ITARIPVGPD-PAGIAVTPDGKKVYVALSFXNTVSVIDTATNTITA 280 (391)
T ss_dssp SSEEEEEEECSSCCEEEEEETTTTE--EEEEEECCSS-EEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEE
T ss_pred CCEEEEEecCcCCCcEEEEECCCCe--EEEEEecCCC-ccEEEEccCCCEEEEEcCCCCEEEEEECCCCcEEE
Confidence 554443332 135788999887632 3334443222 2334455667654 443 37889999999887654
No 40
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=90.56 E-value=8.4 Score=33.78 Aligned_cols=186 Identities=12% Similarity=0.092 Sum_probs=95.4
Q ss_pred eeEEEe-ecCceEEEEeCCCcccccCCCCCcCCCCcccceeeeeeeeecCCCCCeEEEEEEEEeecccccccCcceEEEE
Q 045569 109 GIFCIF-GNNNRITLWNRATKESRVLPKCTTVFPKYTSIFCKCTGFGLDPMSTDYKLVLIFTLWNEKLDLLYEFSHVAVY 187 (362)
Q Consensus 109 GLl~~~-~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~eVy 187 (362)
+++++. +..+.+.+||..+++....-... .. ..++.+++..+ + ++... .. ...+.++
T Consensus 2 ~~l~vs~~~d~~v~v~d~~~~~~~~~~~~~----~~------~~~~~~s~dg~-~-l~~~~---~~-------d~~i~v~ 59 (391)
T 1l0q_A 2 TFAYIANSESDNISVIDVTSNKVTATIPVG----SN------PMGAVISPDGT-K-VYVAN---AH-------SNDVSII 59 (391)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEEEEECS----SS------EEEEEECTTSS-E-EEEEE---GG-------GTEEEEE
T ss_pred CEEEEEcCCCCEEEEEECCCCeEEEEeecC----CC------cceEEECCCCC-E-EEEEC---CC-------CCeEEEE
Confidence 345555 45667999999998765421111 11 35566666432 2 22221 11 1358889
Q ss_pred ECCCCCceecccCCCccccccCCcceEEE--CceEEEEeeccCCCccEEEEEEcCCceeee-ecCCCCCCCCCcEEEE-E
Q 045569 188 SLSTNSWRYCDCFKSNHYYMDGAFDSVYL--DGVCYWLSEFRDNDHKVILSFHLGNEVFEE-IQEPYIPESTPTILGI-Y 263 (362)
Q Consensus 188 ss~~~~W~~~~~~~~~~~~~~~~~~~v~~--~G~lywl~~~~~~~~~~il~fD~~~e~~~~-i~~P~~~~~~~~~l~~-~ 263 (362)
+..++.-...-... .. ..++.+ +|..-+..... ...|..+|+.+.+... +..... ...+.. .
T Consensus 60 d~~~~~~~~~~~~~--~~-----v~~~~~spdg~~l~~~~~~---~~~v~v~d~~~~~~~~~~~~~~~----~~~~~~s~ 125 (391)
T 1l0q_A 60 DTATNNVIATVPAG--SS-----PQGVAVSPDGKQVYVTNMA---SSTLSVIDTTSNTVAGTVKTGKS----PLGLALSP 125 (391)
T ss_dssp ETTTTEEEEEEECS--SS-----EEEEEECTTSSEEEEEETT---TTEEEEEETTTTEEEEEEECSSS----EEEEEECT
T ss_pred ECCCCeEEEEEECC--CC-----ccceEECCCCCEEEEEECC---CCEEEEEECCCCeEEEEEeCCCC----cceEEECC
Confidence 98877443211111 01 122222 35433333222 3479999998876533 333221 123333 2
Q ss_pred CCeEEEEEEcCCCCeEEEEEeeCCeeEEEEEeCCCCCceeeEEEeeCCcEE-EEe-cCCeEEEEeCCCCcEEE
Q 045569 264 NHSLCLLLSHNIENYYDIWVMKYKCWIKQLSLGPLNGVRTPLGFWKKGAFF-VHS-TNEQLLLYDPNTQEMRD 334 (362)
Q Consensus 264 ~g~L~l~~~~~~~~~~~IW~l~~~~W~~~~~i~~~~~~~~~~~~~~~g~il-~~~-~~~~~~~yd~~~~~~~~ 334 (362)
+|+..++... ....+.+|-++........... .. ...+.+..+|+.+ +.. .++.+..||+++++...
T Consensus 126 dg~~l~~~~~-~~~~v~~~d~~~~~~~~~~~~~--~~-~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~~ 194 (391)
T 1l0q_A 126 DGKKLYVTNN-GDKTVSVINTVTKAVINTVSVG--RS-PKGIAVTPDGTKVYVANFDSMSISVIDTVTNSVID 194 (391)
T ss_dssp TSSEEEEEET-TTTEEEEEETTTTEEEEEEECC--SS-EEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEE
T ss_pred CCCEEEEEeC-CCCEEEEEECCCCcEEEEEecC--CC-cceEEECCCCCEEEEEeCCCCEEEEEECCCCeEEE
Confidence 5554433332 4678999988764433333222 11 2344555566554 443 36789999999876543
No 41
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=90.31 E-value=7.2 Score=32.60 Aligned_cols=188 Identities=14% Similarity=0.182 Sum_probs=98.7
Q ss_pred eeeeEEEeec--CceEEEEeCCCcccccCCCCCcCCCCcccceeeeeeeeecCCCCCeEEEEEEEEeecccccccCcceE
Q 045569 107 YNGIFCIFGN--NNRITLWNRATKESRVLPKCTTVFPKYTSIFCKCTGFGLDPMSTDYKLVLIFTLWNEKLDLLYEFSHV 184 (362)
Q Consensus 107 ~~GLl~~~~~--~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~ 184 (362)
.+|-|.+... ...+.++|+..+....+..... .. ..++.+|+..+ ++... .. ...+
T Consensus 87 ~~g~l~v~~~~~~~~i~~~d~~g~~~~~~~~~~~---~~------~~~i~~~~~g~---l~v~~--~~--------~~~i 144 (286)
T 1q7f_A 87 NSGDIIVTERSPTHQIQIYNQYGQFVRKFGATIL---QH------PRGVTVDNKGR---IIVVE--CK--------VMRV 144 (286)
T ss_dssp TTTEEEEEECGGGCEEEEECTTSCEEEEECTTTC---SC------EEEEEECTTSC---EEEEE--TT--------TTEE
T ss_pred CCCeEEEEcCCCCCEEEEECCCCcEEEEecCccC---CC------ceEEEEeCCCC---EEEEE--CC--------CCEE
Confidence 5676666642 5568999965544444433211 11 46777777542 22221 00 1357
Q ss_pred EEEECCCCCceecccCCCccccccCCcceEEE--CceEEEEeeccCCCccEEEEEEcCCceeeeecCCCCCCCCCcEEEE
Q 045569 185 AVYSLSTNSWRYCDCFKSNHYYMDGAFDSVYL--DGVCYWLSEFRDNDHKVILSFHLGNEVFEEIQEPYIPESTPTILGI 262 (362)
Q Consensus 185 eVyss~~~~W~~~~~~~~~~~~~~~~~~~v~~--~G~lywl~~~~~~~~~~il~fD~~~e~~~~i~~P~~~~~~~~~l~~ 262 (362)
.+|+.....-+...... ... ...++.+ +|.+|..... ...|..||...+....+..+..... ...++.
T Consensus 145 ~~~~~~g~~~~~~~~~~-~~~----~p~~i~~~~~g~l~v~~~~----~~~i~~~~~~g~~~~~~~~~g~~~~-p~~i~~ 214 (286)
T 1q7f_A 145 IIFDQNGNVLHKFGCSK-HLE----FPNGVVVNDKQEIFISDNR----AHCVKVFNYEGQYLRQIGGEGITNY-PIGVGI 214 (286)
T ss_dssp EEECTTSCEEEEEECTT-TCS----SEEEEEECSSSEEEEEEGG----GTEEEEEETTCCEEEEESCTTTSCS-EEEEEE
T ss_pred EEEcCCCCEEEEeCCCC-ccC----CcEEEEECCCCCEEEEECC----CCEEEEEcCCCCEEEEEccCCccCC-CcEEEE
Confidence 77776544333332110 111 1234444 4787665543 3479999998776666644322111 123443
Q ss_pred -ECCeEEEEEEcCCCC-eEEEEEeeCCeeEEEEEeCCCCCceeeEEEeeCCcEEEEecCCeEEEEeCCC
Q 045569 263 -YNHSLCLLLSHNIEN-YYDIWVMKYKCWIKQLSLGPLNGVRTPLGFWKKGAFFVHSTNEQLLLYDPNT 329 (362)
Q Consensus 263 -~~g~L~l~~~~~~~~-~~~IW~l~~~~W~~~~~i~~~~~~~~~~~~~~~g~il~~~~~~~~~~yd~~~ 329 (362)
.+|.|++.... .. .+.+|..+. .-...............+++..+|.+++...++.+.+|+...
T Consensus 215 d~~G~l~v~~~~--~~~~i~~~~~~g-~~~~~~~~~~~~~~~~~i~~~~~g~l~vs~~~~~v~v~~~~~ 280 (286)
T 1q7f_A 215 NSNGEILIADNH--NNFNLTIFTQDG-QLISALESKVKHAQCFDVALMDDGSVVLASKDYRLYIYRYVQ 280 (286)
T ss_dssp CTTCCEEEEECS--SSCEEEEECTTS-CEEEEEEESSCCSCEEEEEEETTTEEEEEETTTEEEEEECSC
T ss_pred CCCCCEEEEeCC--CCEEEEEECCCC-CEEEEEcccCCCCcceeEEECCCCcEEEECCCCeEEEEEccc
Confidence 36788776652 33 788886433 222222222111112345566678888886677899998765
No 42
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=89.97 E-value=8.4 Score=32.84 Aligned_cols=188 Identities=12% Similarity=0.031 Sum_probs=96.7
Q ss_pred eeeEEEe-ecCceEEEEeCCCcccccCCCCCcCCCCcccceeeeeeeeecCCCCCeEEEEEEEEeecccccccCcceEEE
Q 045569 108 NGIFCIF-GNNNRITLWNRATKESRVLPKCTTVFPKYTSIFCKCTGFGLDPMSTDYKLVLIFTLWNEKLDLLYEFSHVAV 186 (362)
Q Consensus 108 ~GLl~~~-~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~eV 186 (362)
.+.+++. .....+.++|+.|++....-... ... . ++.++|..+ + ++... .. ...+.+
T Consensus 9 ~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~---~~~------~-~~~~s~dg~-~-l~~~~---~~-------~~~i~~ 66 (331)
T 3u4y_A 9 SNFGIVVEQHLRRISFFSTDTLEILNQITLG---YDF------V-DTAITSDCS-N-VVVTS---DF-------CQTLVQ 66 (331)
T ss_dssp CCEEEEEEGGGTEEEEEETTTCCEEEEEECC---CCE------E-EEEECSSSC-E-EEEEE---ST-------TCEEEE
T ss_pred CCEEEEEecCCCeEEEEeCcccceeeeEEcc---CCc------c-eEEEcCCCC-E-EEEEe---CC-------CCeEEE
Confidence 3444444 44557999999998875432211 111 3 777777544 2 33222 11 126888
Q ss_pred EECCCCCc--eecccCCCccccccCCc-ceEEECce-EEEEeeccCCCccEEEEEEcCCceee-eecCCCCCCCCCcEEE
Q 045569 187 YSLSTNSW--RYCDCFKSNHYYMDGAF-DSVYLDGV-CYWLSEFRDNDHKVILSFHLGNEVFE-EIQEPYIPESTPTILG 261 (362)
Q Consensus 187 yss~~~~W--~~~~~~~~~~~~~~~~~-~~v~~~G~-lywl~~~~~~~~~~il~fD~~~e~~~-~i~~P~~~~~~~~~l~ 261 (362)
++..++.- +.+.... .+. . -.+.-+|. +| ..... .....|..+|+.+.+.. .++..... ..+.
T Consensus 67 ~d~~~~~~~~~~~~~~~--~~~----~~~~~s~dg~~l~-~~~~~-~~~~~i~v~d~~~~~~~~~~~~~~~~----~~~~ 134 (331)
T 3u4y_A 67 IETQLEPPKVVAIQEGQ--SSM----ADVDITPDDQFAV-TVTGL-NHPFNMQSYSFLKNKFISTIPIPYDA----VGIA 134 (331)
T ss_dssp EECSSSSCEEEEEEECS--SCC----CCEEECTTSSEEE-ECCCS-SSSCEEEEEETTTTEEEEEEECCTTE----EEEE
T ss_pred EECCCCceeEEecccCC--CCc----cceEECCCCCEEE-EecCC-CCcccEEEEECCCCCeEEEEECCCCc----cceE
Confidence 99888754 2221111 111 1 12223454 44 33221 11227999999876653 34432221 2233
Q ss_pred E-ECCe-EEEEEEcCCCCe-EEEEEeeC-CeeEE--EEEeCCCCCceeeEEEeeCCc-EEEEec-CCeEEEEeCCCCcE
Q 045569 262 I-YNHS-LCLLLSHNIENY-YDIWVMKY-KCWIK--QLSLGPLNGVRTPLGFWKKGA-FFVHST-NEQLLLYDPNTQEM 332 (362)
Q Consensus 262 ~-~~g~-L~l~~~~~~~~~-~~IW~l~~-~~W~~--~~~i~~~~~~~~~~~~~~~g~-il~~~~-~~~~~~yd~~~~~~ 332 (362)
. -+|+ |++... .... +.+|.++. +.-.. ...+.. ......+.+..+|+ +++... ++.+..||+++++.
T Consensus 135 ~spdg~~l~~~~~--~~~~~i~~~~~~~~g~~~~~~~~~~~~-~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~ 210 (331)
T 3u4y_A 135 ISPNGNGLILIDR--SSANTVRRFKIDADGVLFDTGQEFISG-GTRPFNITFTPDGNFAFVANLIGNSIGILETQNPEN 210 (331)
T ss_dssp ECTTSSCEEEEEE--TTTTEEEEEEECTTCCEEEEEEEEECS-SSSEEEEEECTTSSEEEEEETTTTEEEEEECSSTTS
T ss_pred ECCCCCEEEEEec--CCCceEEEEEECCCCcEeecCCccccC-CCCccceEECCCCCEEEEEeCCCCeEEEEECCCCcc
Confidence 2 3565 555554 2345 99999986 22111 122222 11234455666777 555543 67899999998775
No 43
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=89.94 E-value=8 Score=33.97 Aligned_cols=111 Identities=14% Similarity=0.042 Sum_probs=59.5
Q ss_pred cceEEECceEEEEeeccCCCccEEEEEEcCCceee-eecCCCCCCCCCcEEEEECCeEEEEEEcCCCCeEEEEEeeC--C
Q 045569 211 FDSVYLDGVCYWLSEFRDNDHKVILSFHLGNEVFE-EIQEPYIPESTPTILGIYNHSLCLLLSHNIENYYDIWVMKY--K 287 (362)
Q Consensus 211 ~~~v~~~G~lywl~~~~~~~~~~il~fD~~~e~~~-~i~~P~~~~~~~~~l~~~~g~L~l~~~~~~~~~~~IW~l~~--~ 287 (362)
...+..+|.+|.....+ .|.++|..+.+.. ..+++..... .....+|.+++... ...+..+-.+. .
T Consensus 97 ~~~~~~~~~v~v~~~~g-----~l~a~d~~tG~~~W~~~~~~~~~~---~p~~~~~~v~v~~~---~g~l~~~d~~tG~~ 165 (376)
T 3q7m_A 97 GGVTVSGGHVYIGSEKA-----QVYALNTSDGTVAWQTKVAGEALS---RPVVSDGLVLIHTS---NGQLQALNEADGAV 165 (376)
T ss_dssp EEEEEETTEEEEEETTS-----EEEEEETTTCCEEEEEECSSCCCS---CCEEETTEEEEECT---TSEEEEEETTTCCE
T ss_pred cCceEeCCEEEEEcCCC-----EEEEEECCCCCEEEEEeCCCceEc---CCEEECCEEEEEcC---CCeEEEEECCCCcE
Confidence 34567788888876544 7999998765433 2344433221 22344666655332 23333333333 4
Q ss_pred eeEEEEEeCCC--CCceeeEEEeeCCcEEEEecCCeEEEEeCCCCcEEE
Q 045569 288 CWIKQLSLGPL--NGVRTPLGFWKKGAFFVHSTNEQLLLYDPNTQEMRD 334 (362)
Q Consensus 288 ~W~~~~~i~~~--~~~~~~~~~~~~g~il~~~~~~~~~~yd~~~~~~~~ 334 (362)
.|.....-... .....|.. .++.+++...++.++.+|+++++..+
T Consensus 166 ~W~~~~~~~~~~~~~~~~~~~--~~~~v~~g~~~g~l~~~d~~tG~~~w 212 (376)
T 3q7m_A 166 KWTVNLDMPSLSLRGESAPTT--AFGAAVVGGDNGRVSAVLMEQGQMIW 212 (376)
T ss_dssp EEEEECCC-----CCCCCCEE--ETTEEEECCTTTEEEEEETTTCCEEE
T ss_pred EEEEeCCCCceeecCCCCcEE--ECCEEEEEcCCCEEEEEECCCCcEEE
Confidence 56554321111 01123332 25667766557789999999887654
No 44
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=89.70 E-value=9.3 Score=33.01 Aligned_cols=194 Identities=11% Similarity=0.016 Sum_probs=100.2
Q ss_pred eeeeEEEe-ecCceEEEEeCCCccc-ccCCCCCcCCCCcccceeeeeeeeecCCCCCeEEEEEEEEeecccccccCcceE
Q 045569 107 YNGIFCIF-GNNNRITLWNRATKES-RVLPKCTTVFPKYTSIFCKCTGFGLDPMSTDYKLVLIFTLWNEKLDLLYEFSHV 184 (362)
Q Consensus 107 ~~GLl~~~-~~~~~~~V~NP~T~~~-~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~ 184 (362)
.+|-+.+. ...+.+.|+|+.|++. ..+|... . ..++.+++. . ++.... .+ ...+
T Consensus 52 ~~~~lyv~~~~~~~v~viD~~t~~~~~~i~~~~-----~------p~~i~~~~~--g-~lyv~~-~~---------~~~v 107 (328)
T 3dsm_A 52 RDGIGWIVVNNSHVIFAIDINTFKEVGRITGFT-----S------PRYIHFLSD--E-KAYVTQ-IW---------DYRI 107 (328)
T ss_dssp ETTEEEEEEGGGTEEEEEETTTCCEEEEEECCS-----S------EEEEEEEET--T-EEEEEE-BS---------CSEE
T ss_pred ECCEEEEEEcCCCEEEEEECcccEEEEEcCCCC-----C------CcEEEEeCC--C-eEEEEE-CC---------CCeE
Confidence 35555555 4455799999999886 4464321 1 345556443 2 444332 11 2358
Q ss_pred EEEECCCCCce-ecccCCCccccccCCcceEEECceEEEEeeccCCCccEEEEEEcCCcee-eeecCCCCCCCCCcEEEE
Q 045569 185 AVYSLSTNSWR-YCDCFKSNHYYMDGAFDSVYLDGVCYWLSEFRDNDHKVILSFHLGNEVF-EEIQEPYIPESTPTILGI 262 (362)
Q Consensus 185 eVyss~~~~W~-~~~~~~~~~~~~~~~~~~v~~~G~lywl~~~~~~~~~~il~fD~~~e~~-~~i~~P~~~~~~~~~l~~ 262 (362)
.+++..++.-. .++....... ......-+..+|.+|...... ...|.++|+.+.+. ..++....... ....
T Consensus 108 ~~iD~~t~~~~~~i~~g~~~~~-~~~p~~i~~~~~~lyv~~~~~---~~~v~viD~~t~~~~~~i~~g~~p~~---i~~~ 180 (328)
T 3dsm_A 108 FIINPKTYEITGYIECPDMDME-SGSTEQMVQYGKYVYVNCWSY---QNRILKIDTETDKVVDELTIGIQPTS---LVMD 180 (328)
T ss_dssp EEEETTTTEEEEEEECTTCCTT-TCBCCCEEEETTEEEEEECTT---CCEEEEEETTTTEEEEEEECSSCBCC---CEEC
T ss_pred EEEECCCCeEEEEEEcCCcccc-CCCcceEEEECCEEEEEcCCC---CCEEEEEECCCCeEEEEEEcCCCccc---eEEc
Confidence 88998887532 2221110000 000022233677887765421 34799999998766 34555332211 1123
Q ss_pred ECCeEEEEEEcCC--------CCeEEEEEeeCCeeEEEEEeCCCCCceeeEEEeeCCcEEEEecCCeEEEEeCCCCcEE
Q 045569 263 YNHSLCLLLSHNI--------ENYYDIWVMKYKCWIKQLSLGPLNGVRTPLGFWKKGAFFVHSTNEQLLLYDPNTQEMR 333 (362)
Q Consensus 263 ~~g~L~l~~~~~~--------~~~~~IW~l~~~~W~~~~~i~~~~~~~~~~~~~~~g~il~~~~~~~~~~yd~~~~~~~ 333 (362)
-+|++++++.... ...+.++-.+...-.+...++.. .....+++..+++.++.... .+..+|++++++.
T Consensus 181 ~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~~~g-~~p~~la~~~d~~~lyv~~~-~v~~~d~~t~~~~ 257 (328)
T 3dsm_A 181 KYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFKFKLG-DWPSEVQLNGTRDTLYWINN-DIWRMPVEADRVP 257 (328)
T ss_dssp TTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEEECCTT-CCCEEEEECTTSCEEEEESS-SEEEEETTCSSCC
T ss_pred CCCCEEEEECCCccCCccccCCceEEEEECCCCeEEEEEecCCC-CCceeEEEecCCCEEEEEcc-EEEEEECCCCcee
Confidence 4688877665310 13444444433443333333211 12344555555665555444 8999999988763
No 45
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=89.64 E-value=8.4 Score=32.42 Aligned_cols=113 Identities=12% Similarity=0.074 Sum_probs=69.4
Q ss_pred EEECceEEEEeeccCCCccEEEEEEcCCcee-eeecCCCCCCCCCcEEEEECCeEEEEEEcCCCCeEEEEEeeCCeeEEE
Q 045569 214 VYLDGVCYWLSEFRDNDHKVILSFHLGNEVF-EEIQEPYIPESTPTILGIYNHSLCLLLSHNIENYYDIWVMKYKCWIKQ 292 (362)
Q Consensus 214 v~~~G~lywl~~~~~~~~~~il~fD~~~e~~-~~i~~P~~~~~~~~~l~~~~g~L~l~~~~~~~~~~~IW~l~~~~W~~~ 292 (362)
.+.+|.+|--+... ....|..+|+.+.+. ..+++|..... .-+...+++|+++.. ... .+|+.+-..-.++
T Consensus 49 ~~~~~~LyestG~~--g~S~v~~vD~~Tgkv~~~~~l~~~~Fg--eGit~~g~~ly~ltw--~~~--~v~v~D~~t~~~~ 120 (262)
T 3nol_A 49 FYRNGYFYESTGLN--GRSSIRKVDIESGKTLQQIELGKRYFG--EGISDWKDKIVGLTW--KNG--LGFVWNIRNLRQV 120 (262)
T ss_dssp EEETTEEEEEEEET--TEEEEEEECTTTCCEEEEEECCTTCCE--EEEEEETTEEEEEES--SSS--EEEEEETTTCCEE
T ss_pred EEECCEEEEECCCC--CCceEEEEECCCCcEEEEEecCCccce--eEEEEeCCEEEEEEe--eCC--EEEEEECccCcEE
Confidence 34577777766543 145799999998776 56777754311 346677889988764 234 4555554444556
Q ss_pred EEeCCCCCceeeEEEeeCCc-EEEEecCCeEEEEeCCCCcE-EEeeE
Q 045569 293 LSLGPLNGVRTPLGFWKKGA-FFVHSTNEQLLLYDPNTQEM-RDLGR 337 (362)
Q Consensus 293 ~~i~~~~~~~~~~~~~~~g~-il~~~~~~~~~~yd~~~~~~-~~v~~ 337 (362)
.+|+... ...++..+|+ +++......+...|++|.+. +.+.+
T Consensus 121 ~ti~~~~---eG~glt~dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V 164 (262)
T 3nol_A 121 RSFNYDG---EGWGLTHNDQYLIMSDGTPVLRFLDPESLTPVRTITV 164 (262)
T ss_dssp EEEECSS---CCCCEEECSSCEEECCSSSEEEEECTTTCSEEEEEEC
T ss_pred EEEECCC---CceEEecCCCEEEEECCCCeEEEEcCCCCeEEEEEEe
Confidence 6666421 2233334544 55555577899999998665 44554
No 46
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=89.20 E-value=8.3 Score=31.73 Aligned_cols=186 Identities=13% Similarity=0.124 Sum_probs=97.8
Q ss_pred eeeeeEEEeecCceEEEEeCCCcccccCCCCCcCCCCcccceeeeeeeeecCCCCCeEEEEEEEEeecccccccCcceEE
Q 045569 106 PYNGIFCIFGNNNRITLWNRATKESRVLPKCTTVFPKYTSIFCKCTGFGLDPMSTDYKLVLIFTLWNEKLDLLYEFSHVA 185 (362)
Q Consensus 106 s~~GLl~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~e 185 (362)
..+|-|.+......++++||.++....++.... .. ..++.+|+..+ +.... .. ...+.
T Consensus 75 ~~~g~l~v~~~~~~i~~~d~~~~~~~~~~~~~~---~~------p~~i~~~~~g~---l~v~~--~~--------~~~i~ 132 (270)
T 1rwi_B 75 DGAGTVYVTDFNNRVVTLAAGSNNQTVLPFDGL---NY------PEGLAVDTQGA---VYVAD--RG--------NNRVV 132 (270)
T ss_dssp CTTCCEEEEETTTEEEEECTTCSCCEECCCCSC---SS------EEEEEECTTCC---EEEEE--GG--------GTEEE
T ss_pred CCCCCEEEEcCCCEEEEEeCCCceEeeeecCCc---CC------CcceEECCCCC---EEEEE--CC--------CCEEE
Confidence 345666655435679999998877655543221 11 46778887432 22221 11 12467
Q ss_pred EEECCCCCceecccCCCccccccCCcceEEE--CceEEEEeeccCCCccEEEEEEcCCceeeeecCCCCCCCCCcEEEEE
Q 045569 186 VYSLSTNSWRYCDCFKSNHYYMDGAFDSVYL--DGVCYWLSEFRDNDHKVILSFHLGNEVFEEIQEPYIPESTPTILGIY 263 (362)
Q Consensus 186 Vyss~~~~W~~~~~~~~~~~~~~~~~~~v~~--~G~lywl~~~~~~~~~~il~fD~~~e~~~~i~~P~~~~~~~~~l~~~ 263 (362)
+|+.++......... ... ...++.+ +|.+|+.... ...|..||..+........... .....++..
T Consensus 133 ~~~~~~~~~~~~~~~--~~~----~p~~i~~~~~g~l~v~~~~----~~~i~~~~~~~~~~~~~~~~~~--~~p~~i~~d 200 (270)
T 1rwi_B 133 KLAAGSKTQTVLPFT--GLN----DPDGVAVDNSGNVYVTDTD----NNRVVKLEAESNNQVVLPFTDI--TAPWGIAVD 200 (270)
T ss_dssp EECTTCCSCEECCCC--SCC----SCCCEEECTTCCEEEEEGG----GTEEEEECTTTCCEEECCCSSC--CSEEEEEEC
T ss_pred EEECCCceeEeeccc--cCC----CceeEEEeCCCCEEEEECC----CCEEEEEecCCCceEeecccCC--CCceEEEEC
Confidence 776555443322111 111 1233443 5887776543 2479999998766544322111 111334443
Q ss_pred -CCeEEEEEEcCCCCeEEEEEeeC-CeeEEEEEeCCCCCceee--EEEeeCCcEEEEec-CCeEEEEeCCCCcE
Q 045569 264 -NHSLCLLLSHNIENYYDIWVMKY-KCWIKQLSLGPLNGVRTP--LGFWKKGAFFVHST-NEQLLLYDPNTQEM 332 (362)
Q Consensus 264 -~g~L~l~~~~~~~~~~~IW~l~~-~~W~~~~~i~~~~~~~~~--~~~~~~g~il~~~~-~~~~~~yd~~~~~~ 332 (362)
+|.|++... ....+.+|..+. .... +. ......| +++..+|.+++... ++++..|++..++.
T Consensus 201 ~~g~l~v~~~--~~~~v~~~~~~~~~~~~----~~-~~~~~~p~~i~~~~~g~l~v~~~~~~~v~~~~~~~~~~ 267 (270)
T 1rwi_B 201 EAGTVYVTEH--NTNQVVKLLAGSTTSTV----LP-FTGLNTPLAVAVDSDRTVYVADRGNDRVVKLTSLEHHH 267 (270)
T ss_dssp TTCCEEEEET--TTSCEEEECTTCSCCEE----CC-CCSCSCEEEEEECTTCCEEEEEGGGTEEEEECCCGGGS
T ss_pred CCCCEEEEEC--CCCcEEEEcCCCCccee----ec-cCCCCCceeEEECCCCCEEEEECCCCEEEEEcCCCccc
Confidence 567776654 345566665544 2111 11 1122233 44456688887764 67899999876653
No 47
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=89.13 E-value=4.6 Score=36.49 Aligned_cols=192 Identities=13% Similarity=0.140 Sum_probs=90.5
Q ss_pred ee-eEEEeecCceEEEEeCCCcccccCCCCCcCCCCcccceeeeeeeeecCCCCCeEEEEEEEEeecccccccCcceEEE
Q 045569 108 NG-IFCIFGNNNRITLWNRATKESRVLPKCTTVFPKYTSIFCKCTGFGLDPMSTDYKLVLIFTLWNEKLDLLYEFSHVAV 186 (362)
Q Consensus 108 ~G-Ll~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~eV 186 (362)
++ +|...+.++.+.|||..+++...+-.... +.. ...++.|.|..+.+ ++... . ...+.+
T Consensus 131 ~~~~lasGs~dg~i~lWd~~~~~~~~~~~~~g--H~~-----~V~~l~f~p~~~~~-l~s~s----~-------D~~v~i 191 (435)
T 4e54_B 131 HPSTVAVGSKGGDIMLWNFGIKDKPTFIKGIG--AGG-----SITGLKFNPLNTNQ-FYASS----M-------EGTTRL 191 (435)
T ss_dssp CTTCEEEEETTSCEEEECSSCCSCCEEECCCS--SSC-----CCCEEEECSSCTTE-EEEEC----S-------SSCEEE
T ss_pred CCCEEEEEeCCCEEEEEECCCCCceeEEEccC--CCC-----CEEEEEEeCCCCCE-EEEEe----C-------CCEEEE
Confidence 44 45555666779999998886543222111 111 14566777654444 22221 1 124788
Q ss_pred EECCCCCceecccCCC-ccccccCCcceEEECceEEEEeeccCCCccEEEEEEcCCceeeeecCCCCCCCCC-cEEEEE-
Q 045569 187 YSLSTNSWRYCDCFKS-NHYYMDGAFDSVYLDGVCYWLSEFRDNDHKVILSFHLGNEVFEEIQEPYIPESTP-TILGIY- 263 (362)
Q Consensus 187 yss~~~~W~~~~~~~~-~~~~~~~~~~~v~~~G~lywl~~~~~~~~~~il~fD~~~e~~~~i~~P~~~~~~~-~~l~~~- 263 (362)
++.+++.-+....... .... ..-...-+|.+...... ...|..+|+.++....+.. . ... ..+...
T Consensus 192 wd~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~l~~g~~----dg~i~~wd~~~~~~~~~~~--h--~~~v~~v~~~p 260 (435)
T 4e54_B 192 QDFKGNILRVFASSDTINIWF---CSLDVSASSRMVVTGDN----VGNVILLNMDGKELWNLRM--H--KKKVTHVALNP 260 (435)
T ss_dssp EETTSCEEEEEECCSSCSCCC---CCEEEETTTTEEEEECS----SSBEEEEESSSCBCCCSBC--C--SSCEEEEEECT
T ss_pred eeccCCceeEEeccCCCCccE---EEEEECCCCCEEEEEeC----CCcEeeeccCcceeEEEec--c--cceEEeeeecC
Confidence 8887765544322211 0100 01112224444333332 2368888887654333221 1 111 222222
Q ss_pred CCe-EEEEEEcCCCCeEEEEEeeCCeeEEEE--EeCCCCCceeeEEEeeCCcEEEEe-cCCeEEEEeCCCCcE
Q 045569 264 NHS-LCLLLSHNIENYYDIWVMKYKCWIKQL--SLGPLNGVRTPLGFWKKGAFFVHS-TNEQLLLYDPNTQEM 332 (362)
Q Consensus 264 ~g~-L~l~~~~~~~~~~~IW~l~~~~W~~~~--~i~~~~~~~~~~~~~~~g~il~~~-~~~~~~~yd~~~~~~ 332 (362)
+|. +.+.+. ....+.||-+....-.... ..... .....+++..+|..++.. .++.+.+||.++...
T Consensus 261 ~~~~~~~s~s--~d~~v~iwd~~~~~~~~~~~~~~~h~-~~v~~~~~spdg~~l~s~~~D~~i~iwd~~~~~~ 330 (435)
T 4e54_B 261 CCDWFLATAS--VDQTVKIWDLRQVRGKASFLYSLPHR-HPVNAACFSPDGARLLTTDQKSEIRVYSASQWDC 330 (435)
T ss_dssp TCSSEEEEEE--TTSBCCEEETTTCCSSSCCSBCCBCS-SCEEECCBCTTSSEEEEEESSSCEEEEESSSSSS
T ss_pred CCceEEEEec--CcceeeEEecccccccceEEEeeecc-ccccceeECCCCCeeEEEcCCCEEEEEECCCCcc
Confidence 344 444444 4578899988651100000 00000 111223334566666554 477899999887553
No 48
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=88.92 E-value=11 Score=32.89 Aligned_cols=194 Identities=13% Similarity=0.009 Sum_probs=86.1
Q ss_pred eeeeEEEeecCceEEEEeCCCcccccCCCCCcCCCCcccceeeeeeeeecCCCCCeEEEEEEEEeecccccccCcceEEE
Q 045569 107 YNGIFCIFGNNNRITLWNRATKESRVLPKCTTVFPKYTSIFCKCTGFGLDPMSTDYKLVLIFTLWNEKLDLLYEFSHVAV 186 (362)
Q Consensus 107 ~~GLl~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~eV 186 (362)
.+|-++..+..+.+.|||..+++...........+.. ....+.+.|.. .+ ++... . ...+.+
T Consensus 104 ~d~~~l~~s~dg~v~lWd~~~~~~~~~~~~~~~~h~~-----~V~~v~~spdg-~~-l~sgs----~-------dg~v~i 165 (357)
T 4g56_B 104 SEKGILVASDSGAVELWEILEKESLLVNKFAKYEHDD-----IVKTLSVFSDG-TQ-AVSGG----K-------DFSVKV 165 (357)
T ss_dssp TTTEEEEEETTSCEEEC--------CCCCEEECCCSS-----CEEEEEECSSS-SE-EEEEE----T-------TSCEEE
T ss_pred CCCCEEEEECCCEEEEeeccccceeEEEeeccCCCCC-----CEEEEEECCCC-CE-EEEEe----C-------CCeEEE
Confidence 3455555555567999999998765444332212211 14566666643 22 22221 1 125888
Q ss_pred EECCCCCcee-cccCCCccccccCCcceEEE--CceEEEEeeccCCCccEEEEEEcCCceeee-ecCCCCCCCCC-cEEE
Q 045569 187 YSLSTNSWRY-CDCFKSNHYYMDGAFDSVYL--DGVCYWLSEFRDNDHKVILSFHLGNEVFEE-IQEPYIPESTP-TILG 261 (362)
Q Consensus 187 yss~~~~W~~-~~~~~~~~~~~~~~~~~v~~--~G~lywl~~~~~~~~~~il~fD~~~e~~~~-i~~P~~~~~~~-~~l~ 261 (362)
++..++.-.. ..... . .-.++.+ +|.-+.+.... ...|..+|+.+.+-.. +..... ... ..+.
T Consensus 166 wd~~~~~~~~~~~~h~--~-----~v~~v~~s~~~~~~~~s~~~---dg~v~~wd~~~~~~~~~~~~~~~--~~~v~~v~ 233 (357)
T 4g56_B 166 WDLSQKAVLKSYNAHS--S-----EVNCVAACPGKDTIFLSCGE---DGRILLWDTRKPKPATRIDFCAS--DTIPTSVT 233 (357)
T ss_dssp EETTTTEEEEEECCCS--S-----CEEEEEECTTCSSCEEEEET---TSCEEECCTTSSSCBCBCCCTTC--CSCEEEEE
T ss_pred EECCCCcEEEEEcCCC--C-----CEEEEEEccCCCceeeeecc---CCceEEEECCCCceeeeeeeccc--cccccchh
Confidence 8887763221 11100 0 0112222 22212222221 2367888887654322 222111 111 2222
Q ss_pred EE--CCeEEEEEEcCCCCeEEEEEeeCCeeEEEEEeCCCCCceeeEEEeeCC-cEEEE-ecCCeEEEEeCCCCcEEE
Q 045569 262 IY--NHSLCLLLSHNIENYYDIWVMKYKCWIKQLSLGPLNGVRTPLGFWKKG-AFFVH-STNEQLLLYDPNTQEMRD 334 (362)
Q Consensus 262 ~~--~g~L~l~~~~~~~~~~~IW~l~~~~W~~~~~i~~~~~~~~~~~~~~~g-~il~~-~~~~~~~~yd~~~~~~~~ 334 (362)
.. ++.+.+++. ....+.||-++... ....+.....-...+++..++ .++.. ..++.+.+||.++++...
T Consensus 234 ~sp~~~~~la~g~--~d~~i~~wd~~~~~--~~~~~~~~~~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~~~~~~ 306 (357)
T 4g56_B 234 WHPEKDDTFACGD--ETGNVSLVNIKNPD--SAQTSAVHSQNITGLAYSYHSSPFLASISEDCTVAVLDADFSEVFR 306 (357)
T ss_dssp ECTTSTTEEEEEE--SSSCEEEEESSCGG--GCEEECCCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTSCEEEE
T ss_pred hhhcccceEEEee--cccceeEEECCCCc--EeEEEeccceeEEEEEEcCCCCCEEEEEeCCCEEEEEECCCCcEeE
Confidence 22 345554444 45789999887621 222333222222334444454 45543 347789999999887544
No 49
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=88.56 E-value=11 Score=33.01 Aligned_cols=111 Identities=9% Similarity=0.088 Sum_probs=64.6
Q ss_pred cceEEECceEEEEeeccCCCccEEEEEEcCCceeee-ecCCCCC------CCCC-cEEEEECCeEEEEEEcCCCCeEEEE
Q 045569 211 FDSVYLDGVCYWLSEFRDNDHKVILSFHLGNEVFEE-IQEPYIP------ESTP-TILGIYNHSLCLLLSHNIENYYDIW 282 (362)
Q Consensus 211 ~~~v~~~G~lywl~~~~~~~~~~il~fD~~~e~~~~-i~~P~~~------~~~~-~~l~~~~g~L~l~~~~~~~~~~~IW 282 (362)
..++..+|.+|.....+ .|.+||..+.+... ..++... .... ......+|.+++... ...+..+
T Consensus 47 ~~p~v~~~~v~~~~~~g-----~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~---~g~l~a~ 118 (376)
T 3q7m_A 47 LHPALADNVVYAADRAG-----LVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGGVTVSGGHVYIGSE---KAQVYAL 118 (376)
T ss_dssp CCCEEETTEEEEECTTS-----EEEEEETTTCCEEEEEECCC---CCSCCCCCEEEEEEEETTEEEEEET---TSEEEEE
T ss_pred eccEEECCEEEEEcCCC-----eEEEEEccCCceeeeecCccccccccccCcccccCceEeCCEEEEEcC---CCEEEEE
Confidence 46788999999876543 79999997654432 2333221 1111 345567788776553 2344444
Q ss_pred EeeC--CeeEEEEEeCCCCCceeeEEEeeCCcEEEEecCCeEEEEeCCCCcEEE
Q 045569 283 VMKY--KCWIKQLSLGPLNGVRTPLGFWKKGAFFVHSTNEQLLLYDPNTQEMRD 334 (362)
Q Consensus 283 ~l~~--~~W~~~~~i~~~~~~~~~~~~~~~g~il~~~~~~~~~~yd~~~~~~~~ 334 (362)
-.+. ..|... +.. .....|. ..++.+++...++.++.+|.++++..+
T Consensus 119 d~~tG~~~W~~~--~~~-~~~~~p~--~~~~~v~v~~~~g~l~~~d~~tG~~~W 167 (376)
T 3q7m_A 119 NTSDGTVAWQTK--VAG-EALSRPV--VSDGLVLIHTSNGQLQALNEADGAVKW 167 (376)
T ss_dssp ETTTCCEEEEEE--CSS-CCCSCCE--EETTEEEEECTTSEEEEEETTTCCEEE
T ss_pred ECCCCCEEEEEe--CCC-ceEcCCE--EECCEEEEEcCCCeEEEEECCCCcEEE
Confidence 4433 456543 221 1122333 236777777667889999999887543
No 50
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=88.25 E-value=11 Score=31.82 Aligned_cols=185 Identities=12% Similarity=0.031 Sum_probs=91.6
Q ss_pred eeEEEeecCceEEEEeCCCccccc-CCCCCcCCCCcccceeeeeeeeecCCCCCeEEEEEEEEeecccccccCcceEEEE
Q 045569 109 GIFCIFGNNNRITLWNRATKESRV-LPKCTTVFPKYTSIFCKCTGFGLDPMSTDYKLVLIFTLWNEKLDLLYEFSHVAVY 187 (362)
Q Consensus 109 GLl~~~~~~~~~~V~NP~T~~~~~-LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~eVy 187 (362)
.+|...+.+..++++|+.|++.+. ++...... .....+.|.. + ++. . . ...+..|
T Consensus 6 ~~lv~~~~~~~v~~~d~~tG~~~w~~~~~~~~~---------~~~~~~~pdG-~--ilv-s--~---------~~~V~~~ 61 (276)
T 3no2_A 6 HLLVGGSGWNKIAIINKDTKEIVWEYPLEKGWE---------CNSVAATKAG-E--ILF-S--Y---------SKGAKMI 61 (276)
T ss_dssp EEEEECTTCSEEEEEETTTTEEEEEEECCTTCC---------CCEEEECTTS-C--EEE-E--C---------BSEEEEE
T ss_pred cEEEeeCCCCEEEEEECCCCeEEEEeCCCccCC---------CcCeEECCCC-C--EEE-e--C---------CCCEEEE
Confidence 344444566679999999988542 33321101 1222334432 2 222 1 1 1247777
Q ss_pred ECCCC--CceecccCCCccccccCCcceEEECceEEEEeeccCCCccEEEEEEcCCceeeeecCCCCCCC---CC-cEEE
Q 045569 188 SLSTN--SWRYCDCFKSNHYYMDGAFDSVYLDGVCYWLSEFRDNDHKVILSFHLGNEVFEEIQEPYIPES---TP-TILG 261 (362)
Q Consensus 188 ss~~~--~W~~~~~~~~~~~~~~~~~~~v~~~G~lywl~~~~~~~~~~il~fD~~~e~~~~i~~P~~~~~---~~-~~l~ 261 (362)
+. ++ .|+.-.... ... ....+..||.++...... ...+++||.+.+....+.+...... .. ..-.
T Consensus 62 d~-~G~~~W~~~~~~~--~~~---~~~~~~~dG~~lv~~~~~---~~~v~~vd~~Gk~l~~~~~~~~~~~~~~~~~~v~~ 132 (276)
T 3no2_A 62 TR-DGRELWNIAAPAG--CEM---QTARILPDGNALVAWCGH---PSTILEVNMKGEVLSKTEFETGIERPHAQFRQINK 132 (276)
T ss_dssp CT-TSCEEEEEECCTT--CEE---EEEEECTTSCEEEEEEST---TEEEEEECTTSCEEEEEEECCSCSSGGGSCSCCEE
T ss_pred CC-CCCEEEEEcCCCC--ccc---cccEECCCCCEEEEecCC---CCEEEEEeCCCCEEEEEeccCCCCcccccccCceE
Confidence 77 44 576443110 111 023345567766655431 2478889986654444443322111 00 1112
Q ss_pred EECCeEEEEEEcCCCCeEEEEEeeC-CeeEEEEEeCCCCCceeeEEEeeCCcEEEEec-CCeEEEEeCCCCcEE
Q 045569 262 IYNHSLCLLLSHNIENYYDIWVMKY-KCWIKQLSLGPLNGVRTPLGFWKKGAFFVHST-NEQLLLYDPNTQEMR 333 (362)
Q Consensus 262 ~~~g~L~l~~~~~~~~~~~IW~l~~-~~W~~~~~i~~~~~~~~~~~~~~~g~il~~~~-~~~~~~yd~~~~~~~ 333 (362)
..+|.+.++.. ....+.+|-.+. ..|.... ... ........+|.+++... ..+++.+|+++++..
T Consensus 133 ~~~G~~lv~~~--~~~~v~~~d~~G~~~w~~~~--~~~---~~~~~~~~~g~~~v~~~~~~~v~~~d~~tG~~~ 199 (276)
T 3no2_A 133 NKKGNYLVPLF--ATSEVREIAPNGQLLNSVKL--SGT---PFSSAFLDNGDCLVACGDAHCFVQLNLESNRIV 199 (276)
T ss_dssp CTTSCEEEEET--TTTEEEEECTTSCEEEEEEC--SSC---CCEEEECTTSCEEEECBTTSEEEEECTTTCCEE
T ss_pred CCCCCEEEEec--CCCEEEEECCCCCEEEEEEC--CCC---ccceeEcCCCCEEEEeCCCCeEEEEeCcCCcEE
Confidence 33566554443 345666666554 3444322 211 11123345678877655 457999999977653
No 51
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=88.09 E-value=14 Score=32.80 Aligned_cols=189 Identities=9% Similarity=0.047 Sum_probs=96.2
Q ss_pred eeeEEEeecCceEEEEeCCCcccccCCCCCcCCCCcccceeeeeeeeecCCCCCeEEEEEEEEeecccccccCcceEEEE
Q 045569 108 NGIFCIFGNNNRITLWNRATKESRVLPKCTTVFPKYTSIFCKCTGFGLDPMSTDYKLVLIFTLWNEKLDLLYEFSHVAVY 187 (362)
Q Consensus 108 ~GLl~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~eVy 187 (362)
++.++..+.++.+.|||..+++...+-.... ... ...+.+.+. +.+-++.- . ...+.+|
T Consensus 103 ~~~l~~~~~d~~v~lw~~~~~~~~~~~~~~~--~~~------v~~v~~s~~-~~~l~~~~----~--------dg~i~iw 161 (401)
T 4aez_A 103 NLNVVAVALERNVYVWNADSGSVSALAETDE--STY------VASVKWSHD-GSFLSVGL----G--------NGLVDIY 161 (401)
T ss_dssp TTSEEEEEETTEEEEEETTTCCEEEEEECCT--TCC------EEEEEECTT-SSEEEEEE----T--------TSCEEEE
T ss_pred CCCEEEEECCCeEEEeeCCCCcEeEeeecCC--CCC------EEEEEECCC-CCEEEEEC----C--------CCeEEEE
Confidence 4444444555569999999988665433221 111 456677763 33322221 1 1258899
Q ss_pred ECCCCCcee-cccCCCccccccCCcceEEECceEEEEeeccCCCccEEEEEEcCCceeeeecCCCCCCCCCcEEEEE-CC
Q 045569 188 SLSTNSWRY-CDCFKSNHYYMDGAFDSVYLDGVCYWLSEFRDNDHKVILSFHLGNEVFEEIQEPYIPESTPTILGIY-NH 265 (362)
Q Consensus 188 ss~~~~W~~-~~~~~~~~~~~~~~~~~v~~~G~lywl~~~~~~~~~~il~fD~~~e~~~~i~~P~~~~~~~~~l~~~-~g 265 (362)
+..++.-.. .... -. .-..+..+|........ ...|..+|+....-....+...... ...+... +|
T Consensus 162 d~~~~~~~~~~~~~---~~----~v~~~~~~~~~l~~~~~----dg~i~i~d~~~~~~~~~~~~~~~~~-v~~~~~~~~~ 229 (401)
T 4aez_A 162 DVESQTKLRTMAGH---QA----RVGCLSWNRHVLSSGSR----SGAIHHHDVRIANHQIGTLQGHSSE-VCGLAWRSDG 229 (401)
T ss_dssp ETTTCCEEEEECCC---SS----CEEEEEEETTEEEEEET----TSEEEEEETTSSSCEEEEEECCSSC-EEEEEECTTS
T ss_pred ECcCCeEEEEecCC---CC----ceEEEEECCCEEEEEcC----CCCEEEEecccCcceeeEEcCCCCC-eeEEEEcCCC
Confidence 988764322 1111 11 12344556654444433 3478899987432211111111111 0223222 56
Q ss_pred eEEEEEEcCCCCeEEEEEeeCCeeEEEEEeCCCCCceeeEEEeeC-CcEEEEec---CCeEEEEeCCCCcEE
Q 045569 266 SLCLLLSHNIENYYDIWVMKYKCWIKQLSLGPLNGVRTPLGFWKK-GAFFVHST---NEQLLLYDPNTQEMR 333 (362)
Q Consensus 266 ~L~l~~~~~~~~~~~IW~l~~~~W~~~~~i~~~~~~~~~~~~~~~-g~il~~~~---~~~~~~yd~~~~~~~ 333 (362)
.+.+++. ....+.||-++.. .....+.........+.+..+ +.++.... ++.+..||.++++..
T Consensus 230 ~~l~s~~--~d~~v~iwd~~~~--~~~~~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~~~ 297 (401)
T 4aez_A 230 LQLASGG--NDNVVQIWDARSS--IPKFTKTNHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATGARV 297 (401)
T ss_dssp SEEEEEE--TTSCEEEEETTCS--SEEEEECCCSSCCCEEEECTTSTTEEEEECCTTTCEEEEEETTTCCEE
T ss_pred CEEEEEe--CCCeEEEccCCCC--CccEEecCCcceEEEEEECCCCCCEEEEecCCCCCEEEEEECCCCCEE
Confidence 6555555 4578999998762 223333322222234444444 35555543 778999999887643
No 52
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=87.62 E-value=12 Score=32.48 Aligned_cols=185 Identities=15% Similarity=0.127 Sum_probs=81.4
Q ss_pred ecCceEEEEeCCCcccccCCCCCcCCCCcccceeeeeeeeecCCCCCeEEEEEEEEeecccccccCcceEEEEECCCCC-
Q 045569 115 GNNNRITLWNRATKESRVLPKCTTVFPKYTSIFCKCTGFGLDPMSTDYKLVLIFTLWNEKLDLLYEFSHVAVYSLSTNS- 193 (362)
Q Consensus 115 ~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~eVyss~~~~- 193 (362)
+.++.+.|||..++++..+-.... +.. ....+.+.|.. ++ ++... . ...+.+|+..++.
T Consensus 30 ~~d~~i~iw~~~~~~~~~~~~~~~--h~~-----~v~~~~~s~~~-~~-l~s~s----~-------d~~v~vwd~~~~~~ 89 (377)
T 3dwl_C 30 TATNQVELYEQDGNGWKHARTFSD--HDK-----IVTCVDWAPKS-NR-IVTCS----Q-------DRNAYVYEKRPDGT 89 (377)
T ss_dssp CSSSCBCEEEEETTEEEECCCBCC--CSS-----CEEEEEECTTT-CC-EEEEE----T-------TSSEEEC------C
T ss_pred cCCCEEEEEEccCCceEEEEEEec--CCc-----eEEEEEEeCCC-CE-EEEEe----C-------CCeEEEEEcCCCCc
Confidence 455568899998875433333222 111 14566676653 22 22221 1 1258888888776
Q ss_pred ceecccCCCccccccCCcceEEE--CceEEEEeeccCCCccEEEEEEcCCce----eeeecCCCCCCCCCcEEEEE-CCe
Q 045569 194 WRYCDCFKSNHYYMDGAFDSVYL--DGVCYWLSEFRDNDHKVILSFHLGNEV----FEEIQEPYIPESTPTILGIY-NHS 266 (362)
Q Consensus 194 W~~~~~~~~~~~~~~~~~~~v~~--~G~lywl~~~~~~~~~~il~fD~~~e~----~~~i~~P~~~~~~~~~l~~~-~g~ 266 (362)
|.........-. .-..+.+ +|........ ...|..+|+.+.+ ...+..|.. .....+... +|+
T Consensus 90 ~~~~~~~~~~~~----~v~~~~~~~~~~~l~~~~~----d~~i~iwd~~~~~~~~~~~~~~~~h~--~~v~~~~~~~~~~ 159 (377)
T 3dwl_C 90 WKQTLVLLRLNR----AATFVRWSPNEDKFAVGSG----ARVISVCYFEQENDWWVSKHLKRPLR--STILSLDWHPNNV 159 (377)
T ss_dssp CCCEEECCCCSS----CEEEEECCTTSSCCEEEES----SSCEEECCC-----CCCCEEECSSCC--SCEEEEEECTTSS
T ss_pred eeeeeEecccCC----ceEEEEECCCCCEEEEEec----CCeEEEEEECCcccceeeeEeecccC--CCeEEEEEcCCCC
Confidence 554332211000 0111221 3332222222 2357788887764 233333211 111233322 556
Q ss_pred EEEEEEcCCCCeEEEEEeeC---------Cee-------EEEEEeCCCCCceeeEEEeeCCcEEEE-ecCCeEEEEeCCC
Q 045569 267 LCLLLSHNIENYYDIWVMKY---------KCW-------IKQLSLGPLNGVRTPLGFWKKGAFFVH-STNEQLLLYDPNT 329 (362)
Q Consensus 267 L~l~~~~~~~~~~~IW~l~~---------~~W-------~~~~~i~~~~~~~~~~~~~~~g~il~~-~~~~~~~~yd~~~ 329 (362)
+.+.+. ....+.||-++. ..| .....+.. ......+.+..+|++++. ..++.+..||.++
T Consensus 160 ~l~~~~--~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~v~~~~~sp~~~~l~~~~~d~~i~iwd~~~ 236 (377)
T 3dwl_C 160 LLAAGC--ADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEYPS-GGWVHAVGFSPSGNALAYAGHDSSVTIAYPSA 236 (377)
T ss_dssp EEEEEE--SSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECCCC-SSSEEEEEECTTSSCEEEEETTTEEC-CEECS
T ss_pred EEEEEe--CCCEEEEEEEEecccCCCccccccccccchhhhhhcccC-CceEEEEEECCCCCEEEEEeCCCcEEEEECCC
Confidence 555554 357899999853 112 22222211 111233445556665554 4577899999988
Q ss_pred CcE
Q 045569 330 QEM 332 (362)
Q Consensus 330 ~~~ 332 (362)
++.
T Consensus 237 ~~~ 239 (377)
T 3dwl_C 237 PEQ 239 (377)
T ss_dssp TTS
T ss_pred CCC
Confidence 764
No 53
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=87.43 E-value=11 Score=31.25 Aligned_cols=183 Identities=14% Similarity=0.032 Sum_probs=94.5
Q ss_pred eeeeEEEee-cCceEEEEeCCCcccccCCCCCcCCCCcccceeeeeeeeecCCCCCeEEEEEEEEeecccccccCcceEE
Q 045569 107 YNGIFCIFG-NNNRITLWNRATKESRVLPKCTTVFPKYTSIFCKCTGFGLDPMSTDYKLVLIFTLWNEKLDLLYEFSHVA 185 (362)
Q Consensus 107 ~~GLl~~~~-~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~e 185 (362)
.+|-+.+.. ....++.+||. ++....+.+.. ... ..++.+|+..+ +.... .. ...+.
T Consensus 113 ~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~--~~~------~~~i~~d~~g~---l~v~~--~~--------~~~i~ 170 (300)
T 2qc5_A 113 LNGDIWFTQLNGDRIGKLTAD-GTIYEYDLPNK--GSY------PAFITLGSDNA---LWFTE--NQ--------NNSIG 170 (300)
T ss_dssp STTCEEEEETTTTEEEEECTT-SCEEEEECSST--TCC------EEEEEECTTSS---EEEEE--TT--------TTEEE
T ss_pred CCCCEEEEccCCCeEEEECCC-CCEEEccCCCC--CCC------ceeEEECCCCC---EEEEe--cC--------CCeEE
Confidence 466666663 34568889987 65543322111 111 46777776543 22221 00 12467
Q ss_pred EEECCCCCceecccCCCccccccCCcceEEE--CceEEEEeeccCCCccEEEEEEcCCceeeeecCCCCCCCCCcEEEE-
Q 045569 186 VYSLSTNSWRYCDCFKSNHYYMDGAFDSVYL--DGVCYWLSEFRDNDHKVILSFHLGNEVFEEIQEPYIPESTPTILGI- 262 (362)
Q Consensus 186 Vyss~~~~W~~~~~~~~~~~~~~~~~~~v~~--~G~lywl~~~~~~~~~~il~fD~~~e~~~~i~~P~~~~~~~~~l~~- 262 (362)
+|+. ++......... ... ...++.+ +|.+|+.... ...|..||. +.++..+.+|..... ...+..
T Consensus 171 ~~~~-~g~~~~~~~~~-~~~----~~~~i~~d~~g~l~v~~~~----~~~i~~~~~-~g~~~~~~~~~~~~~-~~~i~~d 238 (300)
T 2qc5_A 171 RITN-TGKLEEYPLPT-NAA----APVGITSGNDGALWFVEIM----GNKIGRITT-TGEISEYDIPTPNAR-PHAITAG 238 (300)
T ss_dssp EECT-TCCEEEEECSS-TTC----CEEEEEECTTSSEEEEETT----TTEEEEECT-TCCEEEEECSSTTCC-EEEEEEC
T ss_pred EECC-CCcEEEeeCCC-CCC----CcceEEECCCCCEEEEccC----CCEEEEEcC-CCcEEEEECCCCCCC-ceEEEEC
Confidence 7776 55555432211 111 1234444 5777766543 247999999 666766666643221 123433
Q ss_pred ECCeEEEEEEcCCCCeEEEEEeeCCeeEEEEEeCCCCCceeeEEEeeCCcEEEEecCCeEEEEeCC
Q 045569 263 YNHSLCLLLSHNIENYYDIWVMKYKCWIKQLSLGPLNGVRTPLGFWKKGAFFVHSTNEQLLLYDPN 328 (362)
Q Consensus 263 ~~g~L~l~~~~~~~~~~~IW~l~~~~W~~~~~i~~~~~~~~~~~~~~~g~il~~~~~~~~~~yd~~ 328 (362)
.+|.|.+... ....+.++..+ .... .+.++........+.+..+|.+++.... .+..||++
T Consensus 239 ~~g~l~v~~~--~~~~i~~~~~~-g~~~-~~~~~~~~~~~~~i~~~~~g~l~v~~~~-~i~~~~p~ 299 (300)
T 2qc5_A 239 KNSEIWFTEW--GANQIGRITND-NTIQ-EYQLQTENAEPHGITFGKDGSVWFALKC-KIGKLNLN 299 (300)
T ss_dssp STTCEEEEET--TTTEEEEECTT-SCEE-EEECCSTTCCCCCEEECTTSCEEEECSS-EEEEEEEC
T ss_pred CCCCEEEecc--CCCeEEEECCC-CcEE-EEECCccCCccceeEeCCCCCEEEEccC-ceEEeCCC
Confidence 3677776653 23455555442 3222 2223311112233445557888887664 89999975
No 54
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=86.93 E-value=16 Score=32.43 Aligned_cols=191 Identities=12% Similarity=0.110 Sum_probs=97.2
Q ss_pred eeeeeEEEe-ecCceEEEEeCCCccccc-CCCCCcCCCCcccceeeeeeeeecCCCCCeEEEEEEEEeecccccccCcce
Q 045569 106 PYNGIFCIF-GNNNRITLWNRATKESRV-LPKCTTVFPKYTSIFCKCTGFGLDPMSTDYKLVLIFTLWNEKLDLLYEFSH 183 (362)
Q Consensus 106 s~~GLl~~~-~~~~~~~V~NP~T~~~~~-LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~~~ 183 (362)
+.+|-+++. +....+.+||+.+++... ++... .. ..++.+++..+ + ++... .. ...
T Consensus 178 ~~~~~~~~s~~~d~~v~~~d~~~~~~~~~~~~~~----~~------~~~~~~~~~~~-~-l~~~~---~~-------~~~ 235 (433)
T 3bws_A 178 PEHNELWVSQMQANAVHVFDLKTLAYKATVDLTG----KW------SKILLYDPIRD-L-VYCSN---WI-------SED 235 (433)
T ss_dssp GGGTEEEEEEGGGTEEEEEETTTCCEEEEEECSS----SS------EEEEEEETTTT-E-EEEEE---TT-------TTE
T ss_pred cCCCEEEEEECCCCEEEEEECCCceEEEEEcCCC----CC------eeEEEEcCCCC-E-EEEEe---cC-------CCc
Confidence 446666655 455679999998876442 33111 11 45666766443 2 22221 01 135
Q ss_pred EEEEECCCCCceecccCCCccccccCCcceEEE--CceEEEEeeccCC----CccEEEEEEcCCceeee-ecCCCCCCCC
Q 045569 184 VAVYSLSTNSWRYCDCFKSNHYYMDGAFDSVYL--DGVCYWLSEFRDN----DHKVILSFHLGNEVFEE-IQEPYIPEST 256 (362)
Q Consensus 184 ~eVyss~~~~W~~~~~~~~~~~~~~~~~~~v~~--~G~lywl~~~~~~----~~~~il~fD~~~e~~~~-i~~P~~~~~~ 256 (362)
+.+|+.+++.....-... .. ..++.+ +|...+....... ....|..+|+.+.+... +..+...
T Consensus 236 i~~~d~~~~~~~~~~~~~--~~-----~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~~~~~~~~~--- 305 (433)
T 3bws_A 236 ISVIDRKTKLEIRKTDKI--GL-----PRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDKEKLIDTIGPPGNK--- 305 (433)
T ss_dssp EEEEETTTTEEEEECCCC--SE-----EEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTTTEEEEEEEEEECE---
T ss_pred EEEEECCCCcEEEEecCC--CC-----ceEEEEcCCCCEEEEEECCCCccccCCCeEEEEECCCCcEEeeccCCCCc---
Confidence 888998876543221111 00 122222 4644444432110 13478899998765533 2222211
Q ss_pred CcEEEE-ECCe-EEEEEEcCCCCeEEEEEeeCCeeEEEEEeCCCCCceeeEEEeeCCcEEEEecC---------------
Q 045569 257 PTILGI-YNHS-LCLLLSHNIENYYDIWVMKYKCWIKQLSLGPLNGVRTPLGFWKKGAFFVHSTN--------------- 319 (362)
Q Consensus 257 ~~~l~~-~~g~-L~l~~~~~~~~~~~IW~l~~~~W~~~~~i~~~~~~~~~~~~~~~g~il~~~~~--------------- 319 (362)
..+.. -+|+ |++... ....+.+|.++... ....+... .....+++..+|+.++....
T Consensus 306 -~~~~~~~~g~~l~~~~~--~~~~v~v~d~~~~~--~~~~~~~~-~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~ 379 (433)
T 3bws_A 306 -RHIVSGNTENKIYVSDM--CCSKIEVYDLKEKK--VQKSIPVF-DKPNTIALSPDGKYLYVSCRGPNHPTEGYLKKGLV 379 (433)
T ss_dssp -EEEEECSSTTEEEEEET--TTTEEEEEETTTTE--EEEEEECS-SSEEEEEECTTSSEEEEEECCCCCTTTCTTSCCSS
T ss_pred -ceEEECCCCCEEEEEec--CCCEEEEEECCCCc--EEEEecCC-CCCCeEEEcCCCCEEEEEecCCCcccccccccccc
Confidence 12222 2454 544443 46789999887632 33334322 12234555567765544332
Q ss_pred -CeEEEEeCCCCcEEE
Q 045569 320 -EQLLLYDPNTQEMRD 334 (362)
Q Consensus 320 -~~~~~yd~~~~~~~~ 334 (362)
+.+..||.++++...
T Consensus 380 dg~v~~~d~~~~~~~~ 395 (433)
T 3bws_A 380 LGKVYVIDTTTDTVKE 395 (433)
T ss_dssp CCEEEEEETTTTEEEE
T ss_pred ceEEEEEECCCCcEEE
Confidence 389999998877544
No 55
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=86.89 E-value=17 Score=32.64 Aligned_cols=56 Identities=13% Similarity=0.122 Sum_probs=31.5
Q ss_pred CCeEEEEEeeCCeeEEEEEeC--CCCCceeeEEEeeCCcEEEEecCCeEEEEeCCCCcEE
Q 045569 276 ENYYDIWVMKYKCWIKQLSLG--PLNGVRTPLGFWKKGAFFVHSTNEQLLLYDPNTQEMR 333 (362)
Q Consensus 276 ~~~~~IW~l~~~~W~~~~~i~--~~~~~~~~~~~~~~g~il~~~~~~~~~~yd~~~~~~~ 333 (362)
...+.||-.+.+. .+..+. ....+.....+..+|.++....++.+.+||+++++.+
T Consensus 377 ~~~i~iwd~~~g~--~~~~l~~~~~~~v~s~~~fspdg~~lasg~d~~i~iW~~~~gk~r 434 (435)
T 4e54_B 377 LRTIDVFDGNSGK--MMCQLYDPESSGISSLNEFNPMGDTLASAMGYHILIWSQQEARTR 434 (435)
T ss_dssp CCCEEEECSSSCC--EEEEECCSSCCCCCCEEEECTTSSCEEEECSSEEEECCCC-----
T ss_pred CCEEEEEECCCCc--EEEEEeCCCCCcEEEEEEECCCCCEEEEEcCCcEEEEECCcCeee
Confidence 3578999776632 223332 1122222334556788887777888999999988765
No 56
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=85.96 E-value=7.3 Score=33.62 Aligned_cols=103 Identities=6% Similarity=-0.087 Sum_probs=58.2
Q ss_pred ccEEEEEEcCCceeeeecCCCCCCCCCcEEE-EECCeEEEEEEcCCCCeEEEEEeeCCeeEEEEEeCCCCCceeeEEEee
Q 045569 231 HKVILSFHLGNEVFEEIQEPYIPESTPTILG-IYNHSLCLLLSHNIENYYDIWVMKYKCWIKQLSLGPLNGVRTPLGFWK 309 (362)
Q Consensus 231 ~~~il~fD~~~e~~~~i~~P~~~~~~~~~l~-~~~g~L~l~~~~~~~~~~~IW~l~~~~W~~~~~i~~~~~~~~~~~~~~ 309 (362)
...+..+|..+.++..+......... ..++ .-+|+|+++........+.+|.++.+.+.....+........-+.+..
T Consensus 17 ~i~v~~~d~~tg~~~~~~~~~~~~~p-~~~a~spdg~l~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~p~~~a~sp 95 (347)
T 3hfq_A 17 GIYQGTLDTTAKTLTNDGLLAATQNP-TYLALSAKDCLYSVDKEDDEGGIAAWQIDGQTAHKLNTVVAPGTPPAYVAVDE 95 (347)
T ss_dssp EEEEEEEETTTTEEEEEEEEEECSCC-CCEEECTTCEEEEEEEETTEEEEEEEEEETTEEEEEEEEEEESCCCSEEEEET
T ss_pred CEEEEEEcCCCCeEEEeeeeeccCCc-ceEEEccCCeEEEEEecCCCceEEEEEecCCcEEEeeeeecCCCCCEEEEECC
Confidence 45688888888887765332211111 2233 237886665543235788999997766666555321111123355667
Q ss_pred CCcEEE-Ee-cCCeEEEEeCC-CCcEEE
Q 045569 310 KGAFFV-HS-TNEQLLLYDPN-TQEMRD 334 (362)
Q Consensus 310 ~g~il~-~~-~~~~~~~yd~~-~~~~~~ 334 (362)
+|+.++ .. .++.+..||++ +++.+.
T Consensus 96 dg~~l~~~~~~~~~v~v~~~~~~g~~~~ 123 (347)
T 3hfq_A 96 ARQLVYSANYHKGTAEVMKIAADGALTL 123 (347)
T ss_dssp TTTEEEEEETTTTEEEEEEECTTSCEEE
T ss_pred CCCEEEEEeCCCCEEEEEEeCCCCCeee
Confidence 777544 44 35678899985 344443
No 57
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=85.15 E-value=15 Score=30.45 Aligned_cols=196 Identities=10% Similarity=0.005 Sum_probs=99.6
Q ss_pred EeeeeeeeEEEee-cCceEEEEeCCCcccccCCCCCcCCCCcccceeeeeeeeecCCCCCeEEEEEEEEeecccccccCc
Q 045569 103 LVGPYNGIFCIFG-NNNRITLWNRATKESRVLPKCTTVFPKYTSIFCKCTGFGLDPMSTDYKLVLIFTLWNEKLDLLYEF 181 (362)
Q Consensus 103 ~~~s~~GLl~~~~-~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~ 181 (362)
+....+|-+.+.. ....++++||. ++...+..+.. ... ..++.+|+.. . +.... .. .
T Consensus 62 i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~--~~~------~~~i~~~~~g-~--l~v~~--~~--------~ 119 (299)
T 2z2n_A 62 LTISSDGEVWFTENAANKIGRITKK-GIIKEYTLPNP--DSA------PYGITEGPNG-D--IWFTE--MN--------G 119 (299)
T ss_dssp EEECTTSCEEEEETTTTEEEEECTT-SCEEEEECSST--TCC------EEEEEECTTS-C--EEEEE--TT--------T
T ss_pred EEECCCCCEEEeCCCCCeEEEECCC-CcEEEEeCCCc--CCC------ceeeEECCCC-C--EEEEe--cC--------C
Confidence 3334566666663 35568999986 44433322111 111 4677777643 2 22211 00 1
Q ss_pred ceEEEEECCCCCceecccCCCccccccCCcceEEE--CceEEEEeeccCCCccEEEEEEcCCceeeeecCCCCCCCCCcE
Q 045569 182 SHVAVYSLSTNSWRYCDCFKSNHYYMDGAFDSVYL--DGVCYWLSEFRDNDHKVILSFHLGNEVFEEIQEPYIPESTPTI 259 (362)
Q Consensus 182 ~~~eVyss~~~~W~~~~~~~~~~~~~~~~~~~v~~--~G~lywl~~~~~~~~~~il~fD~~~e~~~~i~~P~~~~~~~~~ 259 (362)
..+.+|+. ++.......... .. ...++.+ +|.+|..... ...|..+|. +.++..+.+|..... ...
T Consensus 120 ~~i~~~d~-~g~~~~~~~~~~-~~----~~~~i~~~~~g~l~v~~~~----~~~i~~~~~-~g~~~~~~~~~~~~~-~~~ 187 (299)
T 2z2n_A 120 NRIGRITD-DGKIREYELPNK-GS----YPSFITLGSDNALWFTENQ----NNAIGRITE-SGDITEFKIPTPASG-PVG 187 (299)
T ss_dssp TEEEEECT-TCCEEEEECSST-TC----CEEEEEECTTSCEEEEETT----TTEEEEECT-TCCEEEEECSSTTCC-EEE
T ss_pred ceEEEECC-CCCEEEecCCCC-CC----CCceEEEcCCCCEEEEeCC----CCEEEEEcC-CCcEEEeeCCCCCCc-cee
Confidence 24666766 554443321110 11 1233333 5777765543 247999999 777776656543221 123
Q ss_pred EEE-ECCeEEEEEEcCCCCeEEEEEeeCCeeEEEEEeCCCCCceeeEEEeeCCcEEEEe-cCCeEEEEeCCCCcEEEeeE
Q 045569 260 LGI-YNHSLCLLLSHNIENYYDIWVMKYKCWIKQLSLGPLNGVRTPLGFWKKGAFFVHS-TNEQLLLYDPNTQEMRDLGR 337 (362)
Q Consensus 260 l~~-~~g~L~l~~~~~~~~~~~IW~l~~~~W~~~~~i~~~~~~~~~~~~~~~g~il~~~-~~~~~~~yd~~~~~~~~v~~ 337 (362)
+.. .+|.|++... ....+.+|-. +..... ..++........+.+..+|.+++.. ..+.+..||+ +++++.+.+
T Consensus 188 i~~~~~g~l~v~~~--~~~~i~~~~~-~g~~~~-~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~~~~~~~ 262 (299)
T 2z2n_A 188 ITKGNDDALWFVEI--IGNKIGRITT-SGEITE-FKIPTPNARPHAITAGAGIDLWFTEWGANKIGRLTS-NNIIEEYPI 262 (299)
T ss_dssp EEECTTSSEEEEET--TTTEEEEECT-TCCEEE-EECSSTTCCEEEEEECSTTCEEEEETTTTEEEEEET-TTEEEEEEC
T ss_pred EEECCCCCEEEEcc--CCceEEEECC-CCcEEE-EECCCCCCCceeEEECCCCCEEEeccCCceEEEECC-CCceEEEeC
Confidence 443 3577776553 2455666655 333322 2222111112334445568888876 3578999999 456655543
No 58
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=84.37 E-value=17 Score=30.43 Aligned_cols=202 Identities=7% Similarity=-0.064 Sum_probs=94.6
Q ss_pred EeeeeeeeEEEee-cCceEEEEeCCCcccccCCCCCcCCCCcccceeeeeeeeecCCCCCeEEEEEEEEeec--cc----
Q 045569 103 LVGPYNGIFCIFG-NNNRITLWNRATKESRVLPKCTTVFPKYTSIFCKCTGFGLDPMSTDYKLVLIFTLWNE--KL---- 175 (362)
Q Consensus 103 ~~~s~~GLl~~~~-~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~--~~---- 175 (362)
+.-+.+|-+++.. ....++++||.+++...+......... .....+.+|+..+ +-+.-. .+.. ..
T Consensus 74 l~~~~dg~l~v~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~-----~~~~~i~~d~~G~-l~vtd~--~~g~~~~~~~~~ 145 (296)
T 3e5z_A 74 HCLNKQGHLIACSHGLRRLERQREPGGEWESIADSFEGKKL-----NSPNDVCLAPDGS-LWFSDP--TYGIDKPEEGYG 145 (296)
T ss_dssp EEECTTCCEEEEETTTTEEEEECSTTCCEEEEECEETTEEC-----CCCCCEEECTTSC-EEEEEC--SHHHHCGGGSSC
T ss_pred eeECCCCcEEEEecCCCeEEEEcCCCCcEEEEeeccCCCCC-----CCCCCEEECCCCC-EEEECC--cccccccccccc
Confidence 3334567666553 345699999999887665332110000 0133566676432 221100 0000 00
Q ss_pred -ccccCcceEEEEECCCCCceecccCCCccccccCCcceEEE--CceEEEEeeccCCCccEEEEEEcC-Ccee---eeec
Q 045569 176 -DLLYEFSHVAVYSLSTNSWRYCDCFKSNHYYMDGAFDSVYL--DGVCYWLSEFRDNDHKVILSFHLG-NEVF---EEIQ 248 (362)
Q Consensus 176 -~~~~~~~~~eVyss~~~~W~~~~~~~~~~~~~~~~~~~v~~--~G~lywl~~~~~~~~~~il~fD~~-~e~~---~~i~ 248 (362)
........+..|+.. +.-+.+... ... ..++.+ +|.++ +.... ...|..||+. +.++ ..+-
T Consensus 146 ~~~~~~~~~l~~~~~~-g~~~~~~~~---~~~----~~gi~~s~dg~~l-v~~~~---~~~i~~~~~~~~g~~~~~~~~~ 213 (296)
T 3e5z_A 146 GEMELPGRWVFRLAPD-GTLSAPIRD---RVK----PNGLAFLPSGNLL-VSDTG---DNATHRYCLNARGETEYQGVHF 213 (296)
T ss_dssp CCCCSSSCEEEEECTT-SCEEEEECC---CSS----EEEEEECTTSCEE-EEETT---TTEEEEEEECSSSCEEEEEEEE
T ss_pred ccccCCCcEEEEECCC-CCEEEeecC---CCC----CccEEECCCCCEE-EEeCC---CCeEEEEEECCCCcCcCCCeEe
Confidence 000001234445544 433332211 111 234444 57777 44332 3579999986 4444 1111
Q ss_pred CCCCCCCCCcEEE-EECCeEEEEEEcCCCCeEEEEEeeCCeeEEEEEeCCCCCceeeEEEe-eCCcEEEEecCCeEEEEe
Q 045569 249 EPYIPESTPTILG-IYNHSLCLLLSHNIENYYDIWVMKYKCWIKQLSLGPLNGVRTPLGFW-KKGAFFVHSTNEQLLLYD 326 (362)
Q Consensus 249 ~P~~~~~~~~~l~-~~~g~L~l~~~~~~~~~~~IW~l~~~~W~~~~~i~~~~~~~~~~~~~-~~g~il~~~~~~~~~~yd 326 (362)
.... .....+. ..+|.|.+.. ...+.+|-.+ ..-......+ .. ...+.+. .+++.++......++.++
T Consensus 214 -~~~~-~~p~~i~~d~~G~l~v~~----~~~v~~~~~~-g~~~~~~~~~--~~-~~~~~f~~~d~~~L~v~t~~~l~~~~ 283 (296)
T 3e5z_A 214 -TVEP-GKTDGLRVDAGGLIWASA----GDGVHVLTPD-GDELGRVLTP--QT-TSNLCFGGPEGRTLYMTVSTEFWSIE 283 (296)
T ss_dssp -CCSS-SCCCSEEEBTTSCEEEEE----TTEEEEECTT-SCEEEEEECS--SC-CCEEEEESTTSCEEEEEETTEEEEEE
T ss_pred -eCCC-CCCCeEEECCCCCEEEEc----CCeEEEECCC-CCEEEEEECC--CC-ceeEEEECCCCCEEEEEcCCeEEEEE
Confidence 1111 1112233 3478887766 3466666554 3322333332 22 2233342 355555555567999999
Q ss_pred CCCCcEEE
Q 045569 327 PNTQEMRD 334 (362)
Q Consensus 327 ~~~~~~~~ 334 (362)
+++++++.
T Consensus 284 ~~~~~~~~ 291 (296)
T 3e5z_A 284 TNVRGLEH 291 (296)
T ss_dssp CSCCBCCC
T ss_pred cccccccc
Confidence 99988764
No 59
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=84.19 E-value=19 Score=30.85 Aligned_cols=164 Identities=15% Similarity=0.105 Sum_probs=85.1
Q ss_pred eeeeeecCCCCCeEEEEEEEEeecccccccCcceEEEEECC-CCCceecccCCC---ccccccCCcceEEECce-EEEEe
Q 045569 150 CTGFGLDPMSTDYKLVLIFTLWNEKLDLLYEFSHVAVYSLS-TNSWRYCDCFKS---NHYYMDGAFDSVYLDGV-CYWLS 224 (362)
Q Consensus 150 ~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~eVyss~-~~~W~~~~~~~~---~~~~~~~~~~~v~~~G~-lywl~ 224 (362)
..++.++|..+ ++... .. ...+.+|+.. ++.......... ..+. .-...-+|. +|...
T Consensus 143 ~~~~~~spdg~---l~v~~--~~--------~~~v~~~~~~~~g~~~~~~~~~~~~g~~p~----~~~~spdg~~l~v~~ 205 (347)
T 3hfq_A 143 IHYTDLTPDNR---LAVID--LG--------SDKVYVYNVSDAGQLSEQSVLTMEAGFGPR----HLVFSPDGQYAFLAG 205 (347)
T ss_dssp EEEEEECTTSC---EEEEE--TT--------TTEEEEEEECTTSCEEEEEEEECCTTCCEE----EEEECTTSSEEEEEE
T ss_pred ceEEEECCCCc---EEEEe--CC--------CCEEEEEEECCCCcEEEeeeEEcCCCCCCc----eEEECCCCCEEEEEe
Confidence 45677787655 33221 11 1358888887 555543321110 0110 112233576 55544
Q ss_pred eccCCCccEEEEEEcC--Cceeeee----cCCCCCCCCC--cEEE-EECCe-EEEEEEcCCCCeEEEEEeeC-CeeEEEE
Q 045569 225 EFRDNDHKVILSFHLG--NEVFEEI----QEPYIPESTP--TILG-IYNHS-LCLLLSHNIENYYDIWVMKY-KCWIKQL 293 (362)
Q Consensus 225 ~~~~~~~~~il~fD~~--~e~~~~i----~~P~~~~~~~--~~l~-~~~g~-L~l~~~~~~~~~~~IW~l~~-~~W~~~~ 293 (362)
... ..|..+|+. +.++..+ ..|....... ..+. .-+|+ |++... ....+.+|.++. +.+....
T Consensus 206 ~~~----~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~--~~~~v~v~~~~~~g~~~~~~ 279 (347)
T 3hfq_A 206 ELS----SQIASLKYDTQTGAFTQLGIVKTIPADYTAHNGAAAIRLSHDGHFLYVSNR--GYNTLAVFAVTADGHLTLIQ 279 (347)
T ss_dssp TTT----TEEEEEEEETTTTEEEEEEEEESSCTTCCSCCEEEEEEECTTSCEEEEEEE--TTTEEEEEEECGGGCEEEEE
T ss_pred CCC----CEEEEEEecCCCCceEEeeeeeecCCCCCCCCcceeEEECCCCCEEEEEeC--CCCEEEEEEECCCCcEEEeE
Confidence 332 245555544 4665432 2333221111 2233 23666 555544 467899999985 5566666
Q ss_pred EeCCCCCceeeEEEeeCCcEE-EEec-CCeEEEE--eCCCCcEEEee
Q 045569 294 SLGPLNGVRTPLGFWKKGAFF-VHST-NEQLLLY--DPNTQEMRDLG 336 (362)
Q Consensus 294 ~i~~~~~~~~~~~~~~~g~il-~~~~-~~~~~~y--d~~~~~~~~v~ 336 (362)
.+.........+.+..+|+.+ +... ++.+.+| |.++++++.+.
T Consensus 280 ~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~d~~tg~l~~~~ 326 (347)
T 3hfq_A 280 QISTEGDFPRDFDLDPTEAFVVVVNQNTDNATLYARDLTSGKLSLLQ 326 (347)
T ss_dssp EEECSSSCCCEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEE
T ss_pred EEecCCCCcCeEEECCCCCEEEEEEcCCCcEEEEEEeCCCCeEEecc
Confidence 665322223456666778754 4443 4677777 88888888766
No 60
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=84.07 E-value=21 Score=31.28 Aligned_cols=96 Identities=11% Similarity=0.018 Sum_probs=51.3
Q ss_pred EEEEEEcCCceeeeecCCCCCCCCCcEEEEE--CCeEEEEEEcCCCCeEEEEEeeCCeeEEEEEeCCCCCceeeEEEeeC
Q 045569 233 VILSFHLGNEVFEEIQEPYIPESTPTILGIY--NHSLCLLLSHNIENYYDIWVMKYKCWIKQLSLGPLNGVRTPLGFWKK 310 (362)
Q Consensus 233 ~il~fD~~~e~~~~i~~P~~~~~~~~~l~~~--~g~L~l~~~~~~~~~~~IW~l~~~~W~~~~~i~~~~~~~~~~~~~~~ 310 (362)
.|..+|+.+..-....+..........+... +|.+.+.+. ....+.||-++.. .....+.........+.+..+
T Consensus 241 ~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~--~dg~v~~wd~~~~--~~~~~~~~~~~~v~~~~~s~~ 316 (416)
T 2pm9_A 241 SILIWDLRNANTPLQTLNQGHQKGILSLDWCHQDEHLLLSSG--RDNTVLLWNPESA--EQLSQFPARGNWCFKTKFAPE 316 (416)
T ss_dssp CCCEEETTSTTSCSBCCCSCCSSCEEEEEECSSCSSCEEEEE--SSSEEEEECSSSC--CEEEEEECSSSCCCCEEECTT
T ss_pred eEEEEeCCCCCCCcEEeecCccCceeEEEeCCCCCCeEEEEe--CCCCEEEeeCCCC--ccceeecCCCCceEEEEECCC
Confidence 6788888764211111110111111233332 566666555 4678999988763 233444322222234555556
Q ss_pred C-cEEEEec-CCeEEEEeCCCCcE
Q 045569 311 G-AFFVHST-NEQLLLYDPNTQEM 332 (362)
Q Consensus 311 g-~il~~~~-~~~~~~yd~~~~~~ 332 (362)
+ .+++... ++.+.+||+++.+.
T Consensus 317 ~~~~l~s~~~d~~i~iw~~~~~~~ 340 (416)
T 2pm9_A 317 APDLFACASFDNKIEVQTLQNLTN 340 (416)
T ss_dssp CTTEEEECCSSSEEEEEESCCCCC
T ss_pred CCCEEEEEecCCcEEEEEccCCCC
Confidence 6 6666544 77899999987653
No 61
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=83.31 E-value=20 Score=30.35 Aligned_cols=145 Identities=9% Similarity=0.090 Sum_probs=75.7
Q ss_pred eEEEEECCC-CCceecc--cCCCccccccCCcceEEE--Cce-EEEEeeccCCCccEEEEEEcC--Cceee---ee-cCC
Q 045569 183 HVAVYSLST-NSWRYCD--CFKSNHYYMDGAFDSVYL--DGV-CYWLSEFRDNDHKVILSFHLG--NEVFE---EI-QEP 250 (362)
Q Consensus 183 ~~eVyss~~-~~W~~~~--~~~~~~~~~~~~~~~v~~--~G~-lywl~~~~~~~~~~il~fD~~--~e~~~---~i-~~P 250 (362)
.+.+|+..+ +...... ........ ....+.+ +|. +|..... ...|..+|+. +.++. .+ .+|
T Consensus 152 ~v~~~d~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~pdg~~l~~~~~~----~~~i~~~~~~~~~g~~~~~~~~~~~~ 224 (343)
T 1ri6_A 152 RICLFTVSDDGHLVAQDPAEVTTVEGA---GPRHMVFHPNEQYAYCVNEL----NSSVDVWELKDPHGNIECVQTLDMMP 224 (343)
T ss_dssp EEEEEEECTTSCEEEEEEEEEECSTTC---CEEEEEECTTSSEEEEEETT----TTEEEEEESSCTTSCCEEEEEEECSC
T ss_pred EEEEEEecCCCceeeecccccccCCCC---CcceEEECCCCCEEEEEeCC----CCEEEEEEecCCCCcEEEEeeccccC
Confidence 588888887 6665332 11000000 0112222 455 4444322 3468888884 34432 23 244
Q ss_pred CCCCCC-C-cEEEE-ECCeEEEEEEcCCCCeEEEEEeeC--CeeEEEEEeCCCCCceeeEEEeeCCcEEEEec--CCeEE
Q 045569 251 YIPEST-P-TILGI-YNHSLCLLLSHNIENYYDIWVMKY--KCWIKQLSLGPLNGVRTPLGFWKKGAFFVHST--NEQLL 323 (362)
Q Consensus 251 ~~~~~~-~-~~l~~-~~g~L~l~~~~~~~~~~~IW~l~~--~~W~~~~~i~~~~~~~~~~~~~~~g~il~~~~--~~~~~ 323 (362)
...... . ..+.. -+|+..++... ....+.+|.++. ..+.....+..... ...+.+..+|+.++... ++.+.
T Consensus 225 ~~~~~~~~~~~i~~s~dg~~l~v~~~-~~~~i~v~d~~~~~~~~~~~~~~~~~~~-~~~~~~s~dg~~l~~~~~~~~~v~ 302 (343)
T 1ri6_A 225 ENFSDTRWAADIHITPDGRHLYACDR-TASLITVFSVSEDGSVLSKEGFQPTETQ-PRGFNVDHSGKYLIAAGQKSHHIS 302 (343)
T ss_dssp TTCCSCCCEEEEEECTTSSEEEEEET-TTTEEEEEEECTTSCCEEEEEEEECSSS-CCCEEECTTSSEEEEECTTTCEEE
T ss_pred ccccccCCccceEECCCCCEEEEEec-CCCEEEEEEEcCCCCceEEeeeecCCCc-cceEEECCCCCEEEEecCCCCeEE
Confidence 432111 1 12333 24543333332 467899999984 56666666654322 34456666777555443 56777
Q ss_pred EE--eCCCCcEEEee
Q 045569 324 LY--DPNTQEMRDLG 336 (362)
Q Consensus 324 ~y--d~~~~~~~~v~ 336 (362)
+| |.++++++.+.
T Consensus 303 v~~~d~~~g~~~~~~ 317 (343)
T 1ri6_A 303 VYEIVGEQGLLHEKG 317 (343)
T ss_dssp EEEEETTTTEEEEEE
T ss_pred EEEEcCCCceeeEcc
Confidence 77 77788887665
No 62
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=83.25 E-value=25 Score=31.44 Aligned_cols=109 Identities=9% Similarity=0.036 Sum_probs=53.4
Q ss_pred eEEECceEEEEeeccCCCccEEEEEEcCCcee-eeecCCCCCCCCCcEEEEECCeEEEEEEcCCCCeEEEEEeeC-C---
Q 045569 213 SVYLDGVCYWLSEFRDNDHKVILSFHLGNEVF-EEIQEPYIPESTPTILGIYNHSLCLLLSHNIENYYDIWVMKY-K--- 287 (362)
Q Consensus 213 ~v~~~G~lywl~~~~~~~~~~il~fD~~~e~~-~~i~~P~~~~~~~~~l~~~~g~L~l~~~~~~~~~~~IW~l~~-~--- 287 (362)
.+..+|........ ...|..+|+.+.+. ..+... .........+|...+++. ....+.||-++. .
T Consensus 301 ~~~~~~~~l~~g~~----dg~i~iwd~~~~~~~~~~~~h----~~~v~~~~~~~~~l~sg~--~dg~i~vwd~~~~~~~~ 370 (435)
T 1p22_A 301 CLQYRDRLVVSGSS----DNTIRLWDIECGACLRVLEGH----EELVRCIRFDNKRIVSGA--YDGKIKVWDLVAALDPR 370 (435)
T ss_dssp EEEEETTEEEEEET----TSCEEEEETTTCCEEEEECCC----SSCEEEEECCSSEEEEEE--TTSCEEEEEHHHHTSTT
T ss_pred EEEeCCCEEEEEeC----CCeEEEEECCCCCEEEEEeCC----cCcEEEEEecCCEEEEEe--CCCcEEEEECCCCCCcc
Confidence 34445554444433 34688999987544 223221 111233344777666555 467899999865 1
Q ss_pred ---eeEEEEEeCCCCCceeeEEEeeCCcEEEEe-cCCeEEEEeCCCCcEE
Q 045569 288 ---CWIKQLSLGPLNGVRTPLGFWKKGAFFVHS-TNEQLLLYDPNTQEMR 333 (362)
Q Consensus 288 ---~W~~~~~i~~~~~~~~~~~~~~~g~il~~~-~~~~~~~yd~~~~~~~ 333 (362)
.......+.........+.+ ++..++.. .++.+..||+.++...
T Consensus 371 ~~~~~~~~~~~~~h~~~v~~l~~--~~~~l~s~s~Dg~i~iwd~~~~~~~ 418 (435)
T 1p22_A 371 APAGTLCLRTLVEHSGRVFRLQF--DEFQIVSSSHDDTILIWDFLNDPAA 418 (435)
T ss_dssp SCTTTTEEEEECCCSSCCCCEEE--CSSCEEECCSSSEEEEEC-------
T ss_pred ccccchheeeccCCCCCeEEEEe--CCCEEEEEeCCCEEEEEECCCCCCc
Confidence 11233444322211122333 45555444 4788999999886643
No 63
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=82.85 E-value=24 Score=31.06 Aligned_cols=99 Identities=12% Similarity=0.067 Sum_probs=56.5
Q ss_pred ccEEEEEEcCCcee-eeecCCCCCCCCCcEEEE-ECCeEEEEEEcCCCCeEEEEEeeCCeeEEEEEeCCCCCceeeEEEe
Q 045569 231 HKVILSFHLGNEVF-EEIQEPYIPESTPTILGI-YNHSLCLLLSHNIENYYDIWVMKYKCWIKQLSLGPLNGVRTPLGFW 308 (362)
Q Consensus 231 ~~~il~fD~~~e~~-~~i~~P~~~~~~~~~l~~-~~g~L~l~~~~~~~~~~~IW~l~~~~W~~~~~i~~~~~~~~~~~~~ 308 (362)
...|..+|+.+.+. ..+..+.. ...+.. -+|+..++........+.||.++.....+...+.........+.+.
T Consensus 283 d~~i~i~d~~~~~~~~~~~~~~~----v~~~~~s~~~~~l~~~~g~~dg~i~v~~~~~~~~~~~~~~~~h~~~v~~~~~s 358 (401)
T 4aez_A 283 DKQIHFWNAATGARVNTVDAGSQ----VTSLIWSPHSKEIMSTHGFPDNNLSIWSYSSSGLTKQVDIPAHDTRVLYSALS 358 (401)
T ss_dssp TCEEEEEETTTCCEEEEEECSSC----EEEEEECSSSSEEEEEECTTTCEEEEEEEETTEEEEEEEEECCSSCCCEEEEC
T ss_pred CCEEEEEECCCCCEEEEEeCCCc----EEEEEECCCCCeEEEEeecCCCcEEEEecCCccceeEEEecCCCCCEEEEEEC
Confidence 34688888876544 23332211 122322 2566555543335689999999886666666654322222334555
Q ss_pred eCCcEEEEe-cCCeEEEEeCCCCcEE
Q 045569 309 KKGAFFVHS-TNEQLLLYDPNTQEMR 333 (362)
Q Consensus 309 ~~g~il~~~-~~~~~~~yd~~~~~~~ 333 (362)
.+|..++.. .++.+..||+.+++..
T Consensus 359 ~dg~~l~s~~~dg~i~iw~~~~~~~~ 384 (401)
T 4aez_A 359 PDGRILSTAASDENLKFWRVYDGDHV 384 (401)
T ss_dssp TTSSEEEEECTTSEEEEEECCC----
T ss_pred CCCCEEEEEeCCCcEEEEECCCCccc
Confidence 677766654 4788999999887654
No 64
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=82.83 E-value=22 Score=30.62 Aligned_cols=184 Identities=11% Similarity=0.131 Sum_probs=88.5
Q ss_pred ecCceEEEEeCCCcccccCCCCCcCCCCcccceeeeeeeeecCCCCCeEEEEEEEEeecccccccCcceEEEEECCCCCc
Q 045569 115 GNNNRITLWNRATKESRVLPKCTTVFPKYTSIFCKCTGFGLDPMSTDYKLVLIFTLWNEKLDLLYEFSHVAVYSLSTNSW 194 (362)
Q Consensus 115 ~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~eVyss~~~~W 194 (362)
+.+..+.|||..++++........ .+.. ....+.+.|.. .+ ++... . ...+.+++..++.+
T Consensus 35 ~~D~~i~iw~~~~~~~~~~~~~~~-~h~~-----~v~~~~~sp~g-~~-l~s~s----~-------D~~v~iw~~~~~~~ 95 (345)
T 3fm0_A 35 GGDRRIRIWGTEGDSWICKSVLSE-GHQR-----TVRKVAWSPCG-NY-LASAS----F-------DATTCIWKKNQDDF 95 (345)
T ss_dssp ETTSCEEEEEEETTEEEEEEEECS-SCSS-----CEEEEEECTTS-SE-EEEEE----T-------TSCEEEEEECCC-E
T ss_pred cCCCeEEEEEcCCCcceeeeeecc-ccCC-----cEEEEEECCCC-CE-EEEEE----C-------CCcEEEEEccCCCe
Confidence 555668899887775432111101 1111 14566776643 33 22221 1 12477887777665
Q ss_pred eecccCCCccccccCCcceEEE--CceEEEEeeccCCCccEEEEEEcCCce-eeeecCCCCCCCCCcEEEE-ECCeEEEE
Q 045569 195 RYCDCFKSNHYYMDGAFDSVYL--DGVCYWLSEFRDNDHKVILSFHLGNEV-FEEIQEPYIPESTPTILGI-YNHSLCLL 270 (362)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~v~~--~G~lywl~~~~~~~~~~il~fD~~~e~-~~~i~~P~~~~~~~~~l~~-~~g~L~l~ 270 (362)
..+.....+-.. -.++.+ +|........ ...|..+|+.++. ...+..-.........+.. -+|.+.+.
T Consensus 96 ~~~~~~~~h~~~----v~~v~~sp~~~~l~s~s~----D~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s 167 (345)
T 3fm0_A 96 ECVTTLEGHENE----VKSVAWAPSGNLLATCSR----DKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQELLAS 167 (345)
T ss_dssp EEEEEECCCSSC----EEEEEECTTSSEEEEEET----TSCEEEEEECTTSCEEEEEEECCCCSCEEEEEECSSSSCEEE
T ss_pred EEEEEccCCCCC----ceEEEEeCCCCEEEEEEC----CCeEEEEECCCCCCeEEEEEecCcCCCeEEEEECCCCCEEEE
Confidence 443222111100 111222 3433222222 2357777776542 2222111111111022222 24555555
Q ss_pred EEcCCCCeEEEEEeeCCeeEEEEEeCCCCCceeeEEEeeCCcEEEEe-cCCeEEEEeC
Q 045569 271 LSHNIENYYDIWVMKYKCWIKQLSLGPLNGVRTPLGFWKKGAFFVHS-TNEQLLLYDP 327 (362)
Q Consensus 271 ~~~~~~~~~~IW~l~~~~W~~~~~i~~~~~~~~~~~~~~~g~il~~~-~~~~~~~yd~ 327 (362)
+. ....+.||.++...|.....+.........+.+..+|..++.. .++.+..||.
T Consensus 168 ~s--~d~~i~~w~~~~~~~~~~~~~~~h~~~v~~l~~sp~g~~l~s~s~D~~v~iW~~ 223 (345)
T 3fm0_A 168 AS--YDDTVKLYREEEDDWVCCATLEGHESTVWSLAFDPSGQRLASCSDDRTVRIWRQ 223 (345)
T ss_dssp EE--TTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEE
T ss_pred Ee--CCCcEEEEEecCCCEEEEEEecCCCCceEEEEECCCCCEEEEEeCCCeEEEecc
Confidence 54 4578999999888888777776433333445555677766554 4677888875
No 65
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=82.72 E-value=19 Score=29.79 Aligned_cols=193 Identities=10% Similarity=0.060 Sum_probs=98.6
Q ss_pred EeeeeeeeEEEee-cCceEEEEeCCCcccccCCCCCcCCCCcccceeeeeeeeecCCCCCeEEEEEEEEeecccccccCc
Q 045569 103 LVGPYNGIFCIFG-NNNRITLWNRATKESRVLPKCTTVFPKYTSIFCKCTGFGLDPMSTDYKLVLIFTLWNEKLDLLYEF 181 (362)
Q Consensus 103 ~~~s~~GLl~~~~-~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~ 181 (362)
+....+|-|.+.. ....+.++||. ++...++.+.. ... ..++..|+..+ +.... .. .
T Consensus 25 i~~d~~g~l~v~~~~~~~v~~~~~~-~~~~~~~~~~~--~~~------~~~i~~~~~g~---l~v~~---~~-------~ 82 (300)
T 2qc5_A 25 ITSSEDGKVWFTQHKANKISSLDQS-GRIKEFEVPTP--DAK------VMCLIVSSLGD---IWFTE---NG-------A 82 (300)
T ss_dssp EEECTTSCEEEEETTTTEEEEECTT-SCEEEEECSST--TCC------EEEEEECTTSC---EEEEE---TT-------T
T ss_pred eeECCCCCEEEEcCCCCeEEEECCC-CceEEEECCCC--CCc------ceeEEECCCCC---EEEEe---cC-------C
Confidence 3344456666663 45568999998 66655433211 111 45677775432 22211 00 1
Q ss_pred ceEEEEECCCCCceecccCCCccccccCCcceEEE--CceEEEEeeccCCCccEEEEEEcCCceeeeecCCCCCCCCCcE
Q 045569 182 SHVAVYSLSTNSWRYCDCFKSNHYYMDGAFDSVYL--DGVCYWLSEFRDNDHKVILSFHLGNEVFEEIQEPYIPESTPTI 259 (362)
Q Consensus 182 ~~~eVyss~~~~W~~~~~~~~~~~~~~~~~~~v~~--~G~lywl~~~~~~~~~~il~fD~~~e~~~~i~~P~~~~~~~~~ 259 (362)
..+.+|+.. +.++....... .. ...++.+ +|.+|+.... ...|..+|.. .++..+.+|..... ...
T Consensus 83 ~~v~~~d~~-g~~~~~~~~~~-~~----~~~~i~~~~~g~l~v~~~~----~~~i~~~~~~-g~~~~~~~~~~~~~-~~~ 150 (300)
T 2qc5_A 83 NKIGKLSKK-GGFTEYPLPQP-DS----GPYGITEGLNGDIWFTQLN----GDRIGKLTAD-GTIYEYDLPNKGSY-PAF 150 (300)
T ss_dssp TEEEEECTT-SCEEEEECSST-TC----CEEEEEECSTTCEEEEETT----TTEEEEECTT-SCEEEEECSSTTCC-EEE
T ss_pred CeEEEECCC-CCeEEecCCCC-CC----CCccceECCCCCEEEEccC----CCeEEEECCC-CCEEEccCCCCCCC-cee
Confidence 246777766 65554322111 11 1233433 5777765542 2479999998 66666666542221 133
Q ss_pred EEE-ECCeEEEEEEcCCCCeEEEEEeeC-CeeEEEEEeCCCCCceeeEEEeeCCcEEEEec-CCeEEEEeCCCCcEEEe
Q 045569 260 LGI-YNHSLCLLLSHNIENYYDIWVMKY-KCWIKQLSLGPLNGVRTPLGFWKKGAFFVHST-NEQLLLYDPNTQEMRDL 335 (362)
Q Consensus 260 l~~-~~g~L~l~~~~~~~~~~~IW~l~~-~~W~~~~~i~~~~~~~~~~~~~~~g~il~~~~-~~~~~~yd~~~~~~~~v 335 (362)
+.. .+|+|++... .... |++++. ..... ...+.......-+.+..+|.+++... .+.+..||+ ++++..+
T Consensus 151 i~~d~~g~l~v~~~--~~~~--i~~~~~~g~~~~-~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~~~ 223 (300)
T 2qc5_A 151 ITLGSDNALWFTEN--QNNS--IGRITNTGKLEE-YPLPTNAAAPVGITSGNDGALWFVEIMGNKIGRITT-TGEISEY 223 (300)
T ss_dssp EEECTTSSEEEEET--TTTE--EEEECTTCCEEE-EECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEEE
T ss_pred EEECCCCCEEEEec--CCCe--EEEECCCCcEEE-eeCCCCCCCcceEEECCCCCEEEEccCCCEEEEEcC-CCcEEEE
Confidence 443 4677776554 2334 444443 33332 22221111122344445688888765 457999999 5555544
No 66
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=82.69 E-value=25 Score=31.11 Aligned_cols=193 Identities=12% Similarity=0.057 Sum_probs=93.6
Q ss_pred eeeEEEe-ecCceEEEEeCCCcccccCCCC-CcCCCCcccceeeeeeeeecCCCCCeEEEEEEEEeecccccccCcceEE
Q 045569 108 NGIFCIF-GNNNRITLWNRATKESRVLPKC-TTVFPKYTSIFCKCTGFGLDPMSTDYKLVLIFTLWNEKLDLLYEFSHVA 185 (362)
Q Consensus 108 ~GLl~~~-~~~~~~~V~NP~T~~~~~LP~~-~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~e 185 (362)
+|.+++. .....+.+||+.+++.....+. ....+.. ...++.+++.. +++... .. ...+.
T Consensus 133 ~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~-----~v~~~~~~~~~---~~~~s~---~~-------d~~v~ 194 (433)
T 3bws_A 133 NTRLAIPLLEDEGMDVLDINSGQTVRLSPPEKYKKKLG-----FVETISIPEHN---ELWVSQ---MQ-------ANAVH 194 (433)
T ss_dssp SSEEEEEBTTSSSEEEEETTTCCEEEECCCHHHHTTCC-----EEEEEEEGGGT---EEEEEE---GG-------GTEEE
T ss_pred CCeEEEEeCCCCeEEEEECCCCeEeeecCcccccccCC-----ceeEEEEcCCC---EEEEEE---CC-------CCEEE
Confidence 6766666 4455699999999887654332 1111111 13445554432 233222 11 23588
Q ss_pred EEECCCCCcee-cccCCCccccccCCcceEEECce-EEEEeeccCCCccEEEEEEcCCceeee-ecCCCCCCCCCcEEEE
Q 045569 186 VYSLSTNSWRY-CDCFKSNHYYMDGAFDSVYLDGV-CYWLSEFRDNDHKVILSFHLGNEVFEE-IQEPYIPESTPTILGI 262 (362)
Q Consensus 186 Vyss~~~~W~~-~~~~~~~~~~~~~~~~~v~~~G~-lywl~~~~~~~~~~il~fD~~~e~~~~-i~~P~~~~~~~~~l~~ 262 (362)
+|+.+++.-.. +.... .... .-...-+|. +|..... ...|..+|+.+.+... ++.... ...+..
T Consensus 195 ~~d~~~~~~~~~~~~~~-~~~~----~~~~~~~~~~l~~~~~~----~~~i~~~d~~~~~~~~~~~~~~~----~~~~~~ 261 (433)
T 3bws_A 195 VFDLKTLAYKATVDLTG-KWSK----ILLYDPIRDLVYCSNWI----SEDISVIDRKTKLEIRKTDKIGL----PRGLLL 261 (433)
T ss_dssp EEETTTCCEEEEEECSS-SSEE----EEEEETTTTEEEEEETT----TTEEEEEETTTTEEEEECCCCSE----EEEEEE
T ss_pred EEECCCceEEEEEcCCC-CCee----EEEEcCCCCEEEEEecC----CCcEEEEECCCCcEEEEecCCCC----ceEEEE
Confidence 99988764322 21110 0110 111222344 3333322 2479999998765532 332111 122332
Q ss_pred -ECCe-EEEEEEcC-----CCCeEEEEEeeCCeeEEEEEeCCCCCceeeEEEeeCCc-EEEEe-cCCeEEEEeCCCCcEE
Q 045569 263 -YNHS-LCLLLSHN-----IENYYDIWVMKYKCWIKQLSLGPLNGVRTPLGFWKKGA-FFVHS-TNEQLLLYDPNTQEMR 333 (362)
Q Consensus 263 -~~g~-L~l~~~~~-----~~~~~~IW~l~~~~W~~~~~i~~~~~~~~~~~~~~~g~-il~~~-~~~~~~~yd~~~~~~~ 333 (362)
-+|+ |++..... ....+.+|-++...-.. .+... .....+.+..+|+ +++.. .++.+..||+++++..
T Consensus 262 ~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~--~~~~~-~~~~~~~~~~~g~~l~~~~~~~~~v~v~d~~~~~~~ 338 (433)
T 3bws_A 262 SKDGKELYIAQFSASNQESGGGRLGIYSMDKEKLID--TIGPP-GNKRHIVSGNTENKIYVSDMCCSKIEVYDLKEKKVQ 338 (433)
T ss_dssp CTTSSEEEEEEEESCTTCSCCEEEEEEETTTTEEEE--EEEEE-ECEEEEEECSSTTEEEEEETTTTEEEEEETTTTEEE
T ss_pred cCCCCEEEEEECCCCccccCCCeEEEEECCCCcEEe--eccCC-CCcceEEECCCCCEEEEEecCCCEEEEEECCCCcEE
Confidence 2554 44333321 23578888887632222 22111 1122344555665 55543 4788999999987654
Q ss_pred E
Q 045569 334 D 334 (362)
Q Consensus 334 ~ 334 (362)
.
T Consensus 339 ~ 339 (433)
T 3bws_A 339 K 339 (433)
T ss_dssp E
T ss_pred E
Confidence 3
No 67
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=82.64 E-value=11 Score=33.88 Aligned_cols=109 Identities=8% Similarity=0.123 Sum_probs=61.5
Q ss_pred ECceEEEEeeccCCCccEEEEEEcCCceeeeecCCCCCCCCCcEEEE-ECCe-EEEEEEcCCCCeEEEEEeeC-CeeE--
Q 045569 216 LDGVCYWLSEFRDNDHKVILSFHLGNEVFEEIQEPYIPESTPTILGI-YNHS-LCLLLSHNIENYYDIWVMKY-KCWI-- 290 (362)
Q Consensus 216 ~~G~lywl~~~~~~~~~~il~fD~~~e~~~~i~~P~~~~~~~~~l~~-~~g~-L~l~~~~~~~~~~~IW~l~~-~~W~-- 290 (362)
-+|.+||.... ...|..+|+.+.+...+...... . . ++. .+|. |++.... .. -.||+++. ..|.
T Consensus 140 ~~g~lyv~d~~----~~~I~~id~~~g~~~~~~~~~~~--~-~-ia~~~~g~~l~~~d~~--~~-~~I~~~d~~~~~~~~ 208 (409)
T 3hrp_A 140 GNNTVLAYQRD----DPRVRLISVDDNKVTTVHPGFKG--G-K-PAVTKDKQRVYSIGWE--GT-HTVYVYMKASGWAPT 208 (409)
T ss_dssp STTEEEEEETT----TTEEEEEETTTTEEEEEEETCCB--C-B-CEECTTSSEEEEEBSS--TT-CEEEEEEGGGTTCEE
T ss_pred CCCCEEEEecC----CCcEEEEECCCCEEEEeeccCCC--C-c-eeEecCCCcEEEEecC--CC-ceEEEEEcCCCceeE
Confidence 36899998764 34899999998777665322111 1 1 222 2444 4433321 22 16777766 4443
Q ss_pred EEEEeCC-CCCceeeEEEee-CCcEEEEecCCeEEEEeCCCCcEEEe
Q 045569 291 KQLSLGP-LNGVRTPLGFWK-KGAFFVHSTNEQLLLYDPNTQEMRDL 335 (362)
Q Consensus 291 ~~~~i~~-~~~~~~~~~~~~-~g~il~~~~~~~~~~yd~~~~~~~~v 335 (362)
....+.. .......+.+.. +|.||+....+.+..||++++....+
T Consensus 209 ~~g~~~~~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~~~~ 255 (409)
T 3hrp_A 209 RIGQLGSTFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEVTLI 255 (409)
T ss_dssp EEEECCTTSCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCCEEEE
T ss_pred EeeeccchhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCEEEE
Confidence 2212222 111223455555 67888865567899999998876554
No 68
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=82.51 E-value=19 Score=29.66 Aligned_cols=192 Identities=11% Similarity=0.067 Sum_probs=95.7
Q ss_pred eeeeEEEee-cCceEEEEeCCCcccccCCCCCcCCCCcccceeeeeeeeecCCCCCeEEEEEEEEeecccccccCcceEE
Q 045569 107 YNGIFCIFG-NNNRITLWNRATKESRVLPKCTTVFPKYTSIFCKCTGFGLDPMSTDYKLVLIFTLWNEKLDLLYEFSHVA 185 (362)
Q Consensus 107 ~~GLl~~~~-~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~e 185 (362)
.+|.|.+.+ ...+++++++.++....+-... ... ..++.+|+..+...+ .. .. ...+.
T Consensus 46 ~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~---~~~------p~~ia~d~~~~~lyv--~d--~~--------~~~I~ 104 (267)
T 1npe_A 46 VDKVVYWTDISEPSIGRASLHGGEPTTIIRQD---LGS------PEGIALDHLGRTIFW--TD--SQ--------LDRIE 104 (267)
T ss_dssp TTTEEEEEETTTTEEEEEESSSCCCEEEECTT---CCC------EEEEEEETTTTEEEE--EE--TT--------TTEEE
T ss_pred CCCEEEEEECCCCEEEEEecCCCCcEEEEECC---CCC------ccEEEEEecCCeEEE--EE--CC--------CCEEE
Confidence 456666663 3456888888776533321111 111 567888875443222 11 01 23577
Q ss_pred EEECCCCCceecccCCCccccccCCcceEEE---CceEEEEeeccCCCccEEEEEEcCCceeeeecCCCCCCCCCcEEEE
Q 045569 186 VYSLSTNSWRYCDCFKSNHYYMDGAFDSVYL---DGVCYWLSEFRDNDHKVILSFHLGNEVFEEIQEPYIPESTPTILGI 262 (362)
Q Consensus 186 Vyss~~~~W~~~~~~~~~~~~~~~~~~~v~~---~G~lywl~~~~~~~~~~il~fD~~~e~~~~i~~P~~~~~~~~~l~~ 262 (362)
+++.....-+.+... ... ...++.+ +|.+||..... ....|.++++.....+.+.. .... ....++.
T Consensus 105 ~~~~~g~~~~~~~~~--~~~----~P~~i~vd~~~g~lyv~~~~~--~~~~I~~~~~dg~~~~~~~~-~~~~-~P~gia~ 174 (267)
T 1npe_A 105 VAKMDGTQRRVLFDT--GLV----NPRGIVTDPVRGNLYWTDWNR--DNPKIETSHMDGTNRRILAQ-DNLG-LPNGLTF 174 (267)
T ss_dssp EEETTSCSCEEEECS--SCS----SEEEEEEETTTTEEEEEECCS--SSCEEEEEETTSCCCEEEEC-TTCS-CEEEEEE
T ss_pred EEEcCCCCEEEEEEC--CCC----CccEEEEeeCCCEEEEEECCC--CCcEEEEEecCCCCcEEEEE-CCCC-CCcEEEE
Confidence 887765432222111 111 1334444 68999987542 12478888887654443321 1111 1123443
Q ss_pred E--CCeEEEEEEcCCCCeEEEEEeeCCeeEEEEEeCCCCCceeeEEEe-eCCcEEEEec-CCeEEEEeCCCCcE-EEee
Q 045569 263 Y--NHSLCLLLSHNIENYYDIWVMKYKCWIKQLSLGPLNGVRTPLGFW-KKGAFFVHST-NEQLLLYDPNTQEM-RDLG 336 (362)
Q Consensus 263 ~--~g~L~l~~~~~~~~~~~IW~l~~~~W~~~~~i~~~~~~~~~~~~~-~~g~il~~~~-~~~~~~yd~~~~~~-~~v~ 336 (362)
. ++.|+++... ...+.+.-++.. .....+. ....|.++. .++.+++... .+++..+|+++++. +.+.
T Consensus 175 d~~~~~lyv~d~~--~~~I~~~~~~g~--~~~~~~~---~~~~P~gi~~d~~~lyva~~~~~~v~~~d~~~g~~~~~i~ 246 (267)
T 1npe_A 175 DAFSSQLCWVDAG--THRAECLNPAQP--GRRKVLE---GLQYPFAVTSYGKNLYYTDWKTNSVIAMDLAISKEMDTFH 246 (267)
T ss_dssp ETTTTEEEEEETT--TTEEEEEETTEE--EEEEEEE---CCCSEEEEEEETTEEEEEETTTTEEEEEETTTTEEEEEEC
T ss_pred cCCCCEEEEEECC--CCEEEEEecCCC--ceEEEec---CCCCceEEEEeCCEEEEEECCCCeEEEEeCCCCCceEEEc
Confidence 3 4678776653 344444333321 1111122 123444443 2466777654 57899999998764 4444
No 69
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=82.07 E-value=19 Score=30.60 Aligned_cols=114 Identities=11% Similarity=0.070 Sum_probs=60.6
Q ss_pred ECceEEEEeeccCCCccEEEEEEcCCceeeeecCCCCCCCCCcEEEE-ECCeEEEEEEcCC--CCeEEEEEeeCCeeEEE
Q 045569 216 LDGVCYWLSEFRDNDHKVILSFHLGNEVFEEIQEPYIPESTPTILGI-YNHSLCLLLSHNI--ENYYDIWVMKYKCWIKQ 292 (362)
Q Consensus 216 ~~G~lywl~~~~~~~~~~il~fD~~~e~~~~i~~P~~~~~~~~~l~~-~~g~L~l~~~~~~--~~~~~IW~l~~~~W~~~ 292 (362)
-+|.+||..... ..|..+|+.+.++..+..+.. .....+.. -+|+|.+...... ...+.+|-.+...-...
T Consensus 54 ~~g~l~~~~~~~----~~i~~~d~~~~~~~~~~~~~~--~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~~~~~~ 127 (333)
T 2dg1_A 54 RQGQLFLLDVFE----GNIFKINPETKEIKRPFVSHK--ANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDNLQDI 127 (333)
T ss_dssp TTSCEEEEETTT----CEEEEECTTTCCEEEEEECSS--SSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCSCEEE
T ss_pred CCCCEEEEECCC----CEEEEEeCCCCcEEEEeeCCC--CCcceEEECCCCcEEEEeCCCCCCCceEEEEeCCCCEEEEE
Confidence 368888876543 379999999888776532111 11123443 3678777664310 13444444333221111
Q ss_pred EEeCCCCCceeeEEEeeCCcEEEEecC-------CeEEEEeCCCCcEEEe
Q 045569 293 LSLGPLNGVRTPLGFWKKGAFFVHSTN-------EQLLLYDPNTQEMRDL 335 (362)
Q Consensus 293 ~~i~~~~~~~~~~~~~~~g~il~~~~~-------~~~~~yd~~~~~~~~v 335 (362)
..-.........+.+..+|.+++.... ..++.+|+++++++.+
T Consensus 128 ~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~~ 177 (333)
T 2dg1_A 128 IEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPI 177 (333)
T ss_dssp ECSSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEEEE
T ss_pred EccCccCCcccceEECCCCCEEEEeccccccCCCceEEEEeCCCCEEEEe
Confidence 110111111223445567888887542 5799999988776654
No 70
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=82.03 E-value=24 Score=30.44 Aligned_cols=113 Identities=12% Similarity=0.168 Sum_probs=64.4
Q ss_pred Cce-EEEEeeccCCCccEEEEEEcCCceeeeec----CCCCCCCCCcEEEE-ECCeEEEEEEcCC-CCeEEEEEeeC--C
Q 045569 217 DGV-CYWLSEFRDNDHKVILSFHLGNEVFEEIQ----EPYIPESTPTILGI-YNHSLCLLLSHNI-ENYYDIWVMKY--K 287 (362)
Q Consensus 217 ~G~-lywl~~~~~~~~~~il~fD~~~e~~~~i~----~P~~~~~~~~~l~~-~~g~L~l~~~~~~-~~~~~IW~l~~--~ 287 (362)
+|. +|..... ...|..||+.+.++..+. .|.... ....+.. -+|+..++... . ...+.||.++. +
T Consensus 221 dg~~l~v~~~~----~~~v~v~~~~~g~~~~~~~~~~~~~~~~-~~~~i~~spdg~~l~v~~~-~~~~~i~v~~~~~~~g 294 (361)
T 3scy_A 221 DGKFAYLINEI----GGTVIAFRYADGMLDEIQTVAADTVNAQ-GSGDIHLSPDGKYLYASNR-LKADGVAIFKVDETNG 294 (361)
T ss_dssp TSSEEEEEETT----TCEEEEEEEETTEEEEEEEEESCSSCCC-CEEEEEECTTSSEEEEEEC-SSSCEEEEEEECTTTC
T ss_pred CCCEEEEEcCC----CCeEEEEEecCCceEEeEEEecCCCCCC-CcccEEECCCCCEEEEECC-CCCCEEEEEEEcCCCC
Confidence 565 4444422 346888888777664432 222211 1123332 36764444433 3 57899999973 6
Q ss_pred eeEEEEEeCCCCCceeeEEEeeCCcEEEEec--CCeEEE--EeCCCCcEEEee
Q 045569 288 CWIKQLSLGPLNGVRTPLGFWKKGAFFVHST--NEQLLL--YDPNTQEMRDLG 336 (362)
Q Consensus 288 ~W~~~~~i~~~~~~~~~~~~~~~g~il~~~~--~~~~~~--yd~~~~~~~~v~ 336 (362)
.+.....+.. .....-+.+..+|+.++... ++.+.+ +|+++++++.+.
T Consensus 295 ~~~~~~~~~~-g~~~~~~~~spdg~~l~~~~~~~~~v~v~~~d~~~g~~~~~~ 346 (361)
T 3scy_A 295 TLTKVGYQLT-GIHPRNFIITPNGKYLLVACRDTNVIQIFERDQATGLLTDIK 346 (361)
T ss_dssp CEEEEEEEEC-SSCCCEEEECTTSCEEEEEETTTTEEEEEEECTTTCCEEECS
T ss_pred cEEEeeEecC-CCCCceEEECCCCCEEEEEECCCCCEEEEEEECCCCcEeecc
Confidence 6766666654 22234456667787544433 455655 678888887764
No 71
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=81.99 E-value=22 Score=29.93 Aligned_cols=110 Identities=9% Similarity=0.061 Sum_probs=67.2
Q ss_pred ceEEEEeeccCCCccEEEEEEcCCcee-eeecCCCCCCCCCcEEEEECCeEEEEEEcCCCCeEEEEEeeCCeeEEEEEeC
Q 045569 218 GVCYWLSEFRDNDHKVILSFHLGNEVF-EEIQEPYIPESTPTILGIYNHSLCLLLSHNIENYYDIWVMKYKCWIKQLSLG 296 (362)
Q Consensus 218 G~lywl~~~~~~~~~~il~fD~~~e~~-~~i~~P~~~~~~~~~l~~~~g~L~l~~~~~~~~~~~IW~l~~~~W~~~~~i~ 296 (362)
|.+|--+... ....|..+|+.+.+- ..+++|..... .-+...+++|++... .... +++.+-..-..+.+|+
T Consensus 32 g~Lyvstg~~--~~s~v~~iD~~tg~v~~~i~l~~~~fg--eGi~~~g~~lyv~t~--~~~~--v~viD~~t~~v~~~i~ 103 (266)
T 2iwa_A 32 DTLFESTGLY--GRSSVRQVALQTGKVENIHKMDDSYFG--EGLTLLNEKLYQVVW--LKNI--GFIYDRRTLSNIKNFT 103 (266)
T ss_dssp TEEEEEECST--TTCEEEEEETTTCCEEEEEECCTTCCE--EEEEEETTEEEEEET--TCSE--EEEEETTTTEEEEEEE
T ss_pred CeEEEECCCC--CCCEEEEEECCCCCEEEEEecCCCcce--EEEEEeCCEEEEEEe--cCCE--EEEEECCCCcEEEEEE
Confidence 6777765421 145899999998766 55677653221 235556778887764 2344 5555554445666675
Q ss_pred CCCCceeeEEEeeC-CcEEEEecCCeEEEEeCCCCcE-EEeeE
Q 045569 297 PLNGVRTPLGFWKK-GAFFVHSTNEQLLLYDPNTQEM-RDLGR 337 (362)
Q Consensus 297 ~~~~~~~~~~~~~~-g~il~~~~~~~~~~yd~~~~~~-~~v~~ 337 (362)
.. ...+.++..+ +.+++...++.+...|+++.+. +.+.+
T Consensus 104 ~g--~~~g~glt~Dg~~l~vs~gs~~l~viD~~t~~v~~~I~V 144 (266)
T 2iwa_A 104 HQ--MKDGWGLATDGKILYGSDGTSILYEIDPHTFKLIKKHNV 144 (266)
T ss_dssp CC--SSSCCEEEECSSSEEEECSSSEEEEECTTTCCEEEEEEC
T ss_pred CC--CCCeEEEEECCCEEEEECCCCeEEEEECCCCcEEEEEEE
Confidence 43 1123444445 4566666678899999999764 44554
No 72
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=81.96 E-value=23 Score=30.40 Aligned_cols=97 Identities=7% Similarity=0.087 Sum_probs=56.8
Q ss_pred cEEEEEEcCCceeeee-cCCCCCCCCCcEEEEE-CCeEEEEEEcCCCCeEEEEEeeCCeeEEEEEeCCCCCceeeEEEee
Q 045569 232 KVILSFHLGNEVFEEI-QEPYIPESTPTILGIY-NHSLCLLLSHNIENYYDIWVMKYKCWIKQLSLGPLNGVRTPLGFWK 309 (362)
Q Consensus 232 ~~il~fD~~~e~~~~i-~~P~~~~~~~~~l~~~-~g~L~l~~~~~~~~~~~IW~l~~~~W~~~~~i~~~~~~~~~~~~~~ 309 (362)
..|..+|+.++++..+ .++.... ....+... +|++.+++. ....+.+|.++...+.....+.........+.+..
T Consensus 30 ~~v~i~~~~~~~~~~~~~~~~h~~-~v~~~~~~~~~~~l~~~~--~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~~~ 106 (372)
T 1k8k_C 30 HEVHIYEKSGNKWVQVHELKEHNG-QVTGVDWAPDSNRIVTCG--TDRNAYVWTLKGRTWKPTLVILRINRAARCVRWAP 106 (372)
T ss_dssp SEEEEEEEETTEEEEEEEEECCSS-CEEEEEEETTTTEEEEEE--TTSCEEEEEEETTEEEEEEECCCCSSCEEEEEECT
T ss_pred CEEEEEeCCCCcEEeeeeecCCCC-cccEEEEeCCCCEEEEEc--CCCeEEEEECCCCeeeeeEEeecCCCceeEEEECC
Confidence 3688888888765433 2222111 11233332 566655555 45789999998877766665543322233445555
Q ss_pred CCcEEEEe-cCCeEEEEeCCCCc
Q 045569 310 KGAFFVHS-TNEQLLLYDPNTQE 331 (362)
Q Consensus 310 ~g~il~~~-~~~~~~~yd~~~~~ 331 (362)
++..++.. .++.+..||.++++
T Consensus 107 ~~~~l~~~~~d~~v~i~d~~~~~ 129 (372)
T 1k8k_C 107 NEKKFAVGSGSRVISICYFEQEN 129 (372)
T ss_dssp TSSEEEEEETTSSEEEEEEETTT
T ss_pred CCCEEEEEeCCCEEEEEEecCCC
Confidence 66665544 46778899888765
No 73
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=81.55 E-value=24 Score=30.01 Aligned_cols=55 Identities=9% Similarity=0.221 Sum_probs=33.6
Q ss_pred CCCeEEEEEeeC-CeeEEEEEeCCCCCceeeEEEeeCC----cEEEE-ecCCeEEEEeCCC
Q 045569 275 IENYYDIWVMKY-KCWIKQLSLGPLNGVRTPLGFWKKG----AFFVH-STNEQLLLYDPNT 329 (362)
Q Consensus 275 ~~~~~~IW~l~~-~~W~~~~~i~~~~~~~~~~~~~~~g----~il~~-~~~~~~~~yd~~~ 329 (362)
....+.||.++. ..|.....+.........+.+..++ .+++. ..++.+..||.++
T Consensus 187 ~D~~v~lWd~~~~~~~~~~~~l~~h~~~V~~v~~sp~~~~~~~~las~s~D~~v~iw~~~~ 247 (316)
T 3bg1_A 187 CDNLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFIWTCDD 247 (316)
T ss_dssp TTSBCCEEEECTTSCEEEEECCBCCSSCEEEEECCCCSSCSCCEEEEEETTCEEEEEECSS
T ss_pred CCCeEEEEEeCCCCccceeeecccCCCceEEEEecCCCCCCCceEEEEcCCCeEEEEEccC
Confidence 467899999976 6677766554322222333333333 44444 4478899999876
No 74
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=81.48 E-value=20 Score=29.23 Aligned_cols=193 Identities=12% Similarity=0.124 Sum_probs=95.6
Q ss_pred eEeeeeeeeEEE-e-ecCceEEEEeCCCcccccCCCCCcCCCCcccceeeeeeeeecCCCCCeEEEEEEEEeeccccccc
Q 045569 102 ELVGPYNGIFCI-F-GNNNRITLWNRATKESRVLPKCTTVFPKYTSIFCKCTGFGLDPMSTDYKLVLIFTLWNEKLDLLY 179 (362)
Q Consensus 102 ~~~~s~~GLl~~-~-~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~ 179 (362)
.+..+.+|-|.+ . .....+.++|+.++....++.... .. ..++.+|+..+ +.... . .
T Consensus 28 ~i~~~~~g~l~v~~~~~~~~i~~~~~~~~~~~~~~~~~~---~~------p~~i~~~~~g~---l~v~~--~-~------ 86 (270)
T 1rwi_B 28 GVAVDSAGNVYVTSEGMYGRVVKLATGSTGTTVLPFNGL---YQ------PQGLAVDGAGT---VYVTD--F-N------ 86 (270)
T ss_dssp EEEECTTCCEEEEECSSSCEEEEECC-----EECCCCSC---CS------CCCEEECTTCC---EEEEE--T-T------
T ss_pred ceEECCCCCEEEEccCCCCcEEEecCCCcccceEeeCCc---CC------cceeEECCCCC---EEEEc--C-C------
Confidence 344444566666 5 445568999998877655543221 11 35677776432 22221 1 1
Q ss_pred CcceEEEEECCCCCceecccCCCccccccCCcceEEE--CceEEEEeeccCCCccEEEEEEcCCceeeeecCCCCCCCCC
Q 045569 180 EFSHVAVYSLSTNSWRYCDCFKSNHYYMDGAFDSVYL--DGVCYWLSEFRDNDHKVILSFHLGNEVFEEIQEPYIPESTP 257 (362)
Q Consensus 180 ~~~~~eVyss~~~~W~~~~~~~~~~~~~~~~~~~v~~--~G~lywl~~~~~~~~~~il~fD~~~e~~~~i~~P~~~~~~~ 257 (362)
..+.+|+..++.-....... ... ..++.+ +|.+|+.... ...|..+|..+......... .... .
T Consensus 87 --~~i~~~d~~~~~~~~~~~~~--~~~----p~~i~~~~~g~l~v~~~~----~~~i~~~~~~~~~~~~~~~~-~~~~-p 152 (270)
T 1rwi_B 87 --NRVVTLAAGSNNQTVLPFDG--LNY----PEGLAVDTQGAVYVADRG----NNRVVKLAAGSKTQTVLPFT-GLND-P 152 (270)
T ss_dssp --TEEEEECTTCSCCEECCCCS--CSS----EEEEEECTTCCEEEEEGG----GTEEEEECTTCCSCEECCCC-SCCS-C
T ss_pred --CEEEEEeCCCceEeeeecCC--cCC----CcceEECCCCCEEEEECC----CCEEEEEECCCceeEeeccc-cCCC-c
Confidence 24777877765443332111 111 223333 6787776543 23788888766544332211 1111 1
Q ss_pred cEEEEE-CCeEEEEEEcCCCCeEEEEEeeCCeeEEEEEeCCCCCceee--EEEeeCCcEEEEec-CCeEEEEeCCCCcEE
Q 045569 258 TILGIY-NHSLCLLLSHNIENYYDIWVMKYKCWIKQLSLGPLNGVRTP--LGFWKKGAFFVHST-NEQLLLYDPNTQEMR 333 (362)
Q Consensus 258 ~~l~~~-~g~L~l~~~~~~~~~~~IW~l~~~~W~~~~~i~~~~~~~~~--~~~~~~g~il~~~~-~~~~~~yd~~~~~~~ 333 (362)
..+... +|+|++... ....+.+|..+... ... .. ......| +++..+|.+++... .+.+..||++++...
T Consensus 153 ~~i~~~~~g~l~v~~~--~~~~i~~~~~~~~~--~~~-~~-~~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~~~~ 226 (270)
T 1rwi_B 153 DGVAVDNSGNVYVTDT--DNNRVVKLEAESNN--QVV-LP-FTDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTTST 226 (270)
T ss_dssp CCEEECTTCCEEEEEG--GGTEEEEECTTTCC--EEE-CC-CSSCCSEEEEEECTTCCEEEEETTTSCEEEECTTCSCCE
T ss_pred eeEEEeCCCCEEEEEC--CCCEEEEEecCCCc--eEe-ec-ccCCCCceEEEECCCCCEEEEECCCCcEEEEcCCCCcce
Confidence 234433 678776654 24566666554421 111 11 1111233 44555678888764 567999999887654
Q ss_pred Ee
Q 045569 334 DL 335 (362)
Q Consensus 334 ~v 335 (362)
.+
T Consensus 227 ~~ 228 (270)
T 1rwi_B 227 VL 228 (270)
T ss_dssp EC
T ss_pred ee
Confidence 43
No 75
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=81.03 E-value=44 Score=32.77 Aligned_cols=141 Identities=10% Similarity=-0.010 Sum_probs=74.1
Q ss_pred eEEEEECCCCCceecccCCC-ccccccCCcceEEE--CceEEEEeeccCCCccEEEEEEcCCceeeeecCCCCCCCCC-c
Q 045569 183 HVAVYSLSTNSWRYCDCFKS-NHYYMDGAFDSVYL--DGVCYWLSEFRDNDHKVILSFHLGNEVFEEIQEPYIPESTP-T 258 (362)
Q Consensus 183 ~~eVyss~~~~W~~~~~~~~-~~~~~~~~~~~v~~--~G~lywl~~~~~~~~~~il~fD~~~e~~~~i~~P~~~~~~~-~ 258 (362)
.+..|+..++.|+....... .... ..-.++.. +|.+ |++..+ ..+..||..++++..+..+....... .
T Consensus 470 Gl~~~~~~~~~~~~~~~~~~~~~~~--~~i~~i~~d~~g~l-Wigt~~----~Gl~~~~~~~~~~~~~~~~~~l~~~~i~ 542 (781)
T 3v9f_A 470 GVFVIDLASKKVIHHYDTSNSQLLE--NFVRSIAQDSEGRF-WIGTFG----GGVGIYTPDMQLVRKFNQYEGFCSNTIN 542 (781)
T ss_dssp EEEEEESSSSSCCEEECTTTSSCSC--SCEEEEEECTTCCE-EEEESS----SCEEEECTTCCEEEEECTTTTCSCSCEE
T ss_pred ceEEEeCCCCeEEecccCccccccc--ceeEEEEEcCCCCE-EEEEcC----CCEEEEeCCCCeEEEccCCCCCCCCeeE
Confidence 57888888888876543210 1100 01223333 3554 555542 25899999999998876543332222 2
Q ss_pred EEEE-ECCeEEEEEEcCCCCeEEEEEeeC--CeeEEEEEeC-CCCCceeeEEEeeCCcEEEEecCCeEEEEeCCCCcEEE
Q 045569 259 ILGI-YNHSLCLLLSHNIENYYDIWVMKY--KCWIKQLSLG-PLNGVRTPLGFWKKGAFFVHSTNEQLLLYDPNTQEMRD 334 (362)
Q Consensus 259 ~l~~-~~g~L~l~~~~~~~~~~~IW~l~~--~~W~~~~~i~-~~~~~~~~~~~~~~g~il~~~~~~~~~~yd~~~~~~~~ 334 (362)
.+.+ .+|.|.+.+. ..+ |..++. ..+.....-+ ........+....+|.|++.. ...+..||+++++++.
T Consensus 543 ~i~~d~~g~lWi~T~----~Gl-v~~~d~~~~~~~~~~~~~gl~~~~i~~i~~d~~g~lW~~t-~~Gl~~~~~~~~~~~~ 616 (781)
T 3v9f_A 543 QIYRSSKGQMWLATG----EGL-VCFPSARNFDYQVFQRKEGLPNTHIRAISEDKNGNIWAST-NTGISCYITSKKCFYT 616 (781)
T ss_dssp EEEECTTSCEEEEET----TEE-EEESCTTTCCCEEECGGGTCSCCCCCEEEECSSSCEEEEC-SSCEEEEETTTTEEEE
T ss_pred EEEECCCCCEEEEEC----CCc-eEEECCCCCcEEEccccCCCCCceEEEEEECCCCCEEEEc-CCceEEEECCCCceEE
Confidence 3443 3677766543 222 133332 3332211111 111111223334568888875 5669999999988876
Q ss_pred ee
Q 045569 335 LG 336 (362)
Q Consensus 335 v~ 336 (362)
..
T Consensus 617 ~~ 618 (781)
T 3v9f_A 617 YD 618 (781)
T ss_dssp EC
T ss_pred ec
Confidence 54
No 76
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=80.97 E-value=22 Score=30.01 Aligned_cols=109 Identities=8% Similarity=-0.064 Sum_probs=66.0
Q ss_pred EECceEEEEeeccCCCccEEEEEEcCCcee-eeecCCCCCCCCCcEEEEECCeEEEEEEcCCCCeEEEEEeeCCeeEEEE
Q 045569 215 YLDGVCYWLSEFRDNDHKVILSFHLGNEVF-EEIQEPYIPESTPTILGIYNHSLCLLLSHNIENYYDIWVMKYKCWIKQL 293 (362)
Q Consensus 215 ~~~G~lywl~~~~~~~~~~il~fD~~~e~~-~~i~~P~~~~~~~~~l~~~~g~L~l~~~~~~~~~~~IW~l~~~~W~~~~ 293 (362)
+.+|.+|--+... ..|..+|+++.+. +.+ +|..... .-+...+++|+++.. ... .+|+.+-..-.++.
T Consensus 62 ~~~~~Ly~stG~~----g~v~~iD~~Tgkv~~~~-l~~~~Fg--eGit~~g~~Ly~ltw--~~~--~v~V~D~~Tl~~~~ 130 (268)
T 3nok_A 62 FHQGHFFESTGHQ----GTLRQLSLESAQPVWME-RLGNIFA--EGLASDGERLYQLTW--TEG--LLFTWSGMPPQRER 130 (268)
T ss_dssp EETTEEEEEETTT----TEEEECCSSCSSCSEEE-ECTTCCE--EEEEECSSCEEEEES--SSC--EEEEEETTTTEEEE
T ss_pred EECCEEEEEcCCC----CEEEEEECCCCcEEeEE-CCCCcce--eEEEEeCCEEEEEEc--cCC--EEEEEECCcCcEEE
Confidence 3456666655543 2499999998776 456 6654211 236667888988754 233 45666554445666
Q ss_pred EeCCCCCceeeEEEeeCC-cEEEEecCCeEEEEeCCCCcEE-EeeE
Q 045569 294 SLGPLNGVRTPLGFWKKG-AFFVHSTNEQLLLYDPNTQEMR-DLGR 337 (362)
Q Consensus 294 ~i~~~~~~~~~~~~~~~g-~il~~~~~~~~~~yd~~~~~~~-~v~~ 337 (362)
+|+... .+.++..+| .+++...++.+..+|++|.+.. .+.+
T Consensus 131 ti~~~~---eGwGLt~Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V 173 (268)
T 3nok_A 131 TTRYSG---EGWGLCYWNGKLVRSDGGTMLTFHEPDGFALVGAVQV 173 (268)
T ss_dssp EEECSS---CCCCEEEETTEEEEECSSSEEEEECTTTCCEEEEEEC
T ss_pred EEeCCC---ceeEEecCCCEEEEECCCCEEEEEcCCCCeEEEEEEe
Confidence 666421 223333444 4555555788999999997654 4554
No 77
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=80.26 E-value=31 Score=30.58 Aligned_cols=192 Identities=11% Similarity=0.019 Sum_probs=95.6
Q ss_pred eeeeEEEee-cCceEEEEeCCCcccccCCCCCcCCCCcccceeeeeeeeecCCCCCeEEEEEEEEeecccccccCcceEE
Q 045569 107 YNGIFCIFG-NNNRITLWNRATKESRVLPKCTTVFPKYTSIFCKCTGFGLDPMSTDYKLVLIFTLWNEKLDLLYEFSHVA 185 (362)
Q Consensus 107 ~~GLl~~~~-~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~e 185 (362)
.+|.|.+.+ ...+++.+++.++....+-.... .. ..|+++|+..+...+.-. . ...++
T Consensus 126 ~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~---~~------p~glavd~~~g~lY~~d~----~--------~~~I~ 184 (386)
T 3v65_B 126 RRELVFWSDVTLDRILRANLNGSNVEEVVSTGL---ES------PGGLAVDWVHDKLYWTDS----G--------TSRIE 184 (386)
T ss_dssp TTTEEEEEETTTTEEEEEETTSCCEEEEECSSC---SC------CCCEEEETTTTEEEEEET----T--------TTEEE
T ss_pred CCCeEEEEeCCCCcEEEEecCCCCcEEEEeCCC---CC------ccEEEEEeCCCeEEEEcC----C--------CCeEE
Confidence 456666663 34568888887765443322111 11 357777865543222110 0 12567
Q ss_pred EEECCCCCceecccCCCccccccCCcceEEE---CceEEEEeeccCCCccEEEEEEcCCceeeeecCCCCCCCCCcEEEE
Q 045569 186 VYSLSTNSWRYCDCFKSNHYYMDGAFDSVYL---DGVCYWLSEFRDNDHKVILSFHLGNEVFEEIQEPYIPESTPTILGI 262 (362)
Q Consensus 186 Vyss~~~~W~~~~~~~~~~~~~~~~~~~v~~---~G~lywl~~~~~~~~~~il~fD~~~e~~~~i~~P~~~~~~~~~l~~ 262 (362)
+++.....-+.+... .+. ...++.+ +|.|||..... ...|..+|+....-..+-. .... ...-|+.
T Consensus 185 ~~~~dg~~~~~l~~~--~l~----~P~giavdp~~g~ly~td~~~---~~~I~r~~~dG~~~~~~~~-~~~~-~PnGlav 253 (386)
T 3v65_B 185 VANLDGAHRKVLLWQ--SLE----KPRAIALHPMEGTIYWTDWGN---TPRIEASSMDGSGRRIIAD-THLF-WPNGLTI 253 (386)
T ss_dssp ECBTTSCSCEEEECS--SCS----CEEEEEEETTTTEEEEEECSS---SCEEEEEETTSCSCEEEEC-SSCS-CEEEEEE
T ss_pred EEeCCCCceEEeecC--CCC----CCcEEEEEcCCCeEEEeccCC---CCEEEEEeCCCCCcEEEEE-CCCC-CeeeEEE
Confidence 777654432222111 111 1334444 58999987653 3589999987654433311 1111 1123444
Q ss_pred --ECCeEEEEEEcCCCCeEEEEEeeCCeeEEEEEeCCCCCceeeEEEe-eCCcEEEEec-CCeEEEEeCCCCc-EEEee
Q 045569 263 --YNHSLCLLLSHNIENYYDIWVMKYKCWIKQLSLGPLNGVRTPLGFW-KKGAFFVHST-NEQLLLYDPNTQE-MRDLG 336 (362)
Q Consensus 263 --~~g~L~l~~~~~~~~~~~IW~l~~~~W~~~~~i~~~~~~~~~~~~~-~~g~il~~~~-~~~~~~yd~~~~~-~~~v~ 336 (362)
.+|+|+++... ...|...-++... .+ ..+. .....|.++. .++.+|+... .+++..+|..+++ .+.+.
T Consensus 254 d~~~~~lY~aD~~--~~~I~~~d~dG~~-~~-~~~~--~~~~~P~giav~~~~ly~td~~~~~V~~~~~~~G~~~~~i~ 326 (386)
T 3v65_B 254 DYAGRRMYWVDAK--HHVIERANLDGSH-RK-AVIS--QGLPHPFAITVFEDSLYWTDWHTKSINSANKFTGKNQEIIR 326 (386)
T ss_dssp EGGGTEEEEEETT--TTEEEEECTTSCS-CE-EEEC--SSCSSEEEEEEETTEEEEEETTTTEEEEEETTTCCSCEEEE
T ss_pred eCCCCEEEEEECC--CCEEEEEeCCCCe-eE-EEEE--CCCCCceEEEEECCEEEEeeCCCCeEEEEECCCCcceEEEc
Confidence 47888887653 3444433333311 11 1122 1233454443 4567777654 6779999955544 34443
No 78
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=79.64 E-value=27 Score=29.47 Aligned_cols=137 Identities=7% Similarity=0.026 Sum_probs=68.2
Q ss_pred eEEEEECC--CCCceecccCCCccccccCCcceE--EECce-EEEEeeccCCCccEEEEEEcCCc-ee---eeecCCCCC
Q 045569 183 HVAVYSLS--TNSWRYCDCFKSNHYYMDGAFDSV--YLDGV-CYWLSEFRDNDHKVILSFHLGNE-VF---EEIQEPYIP 253 (362)
Q Consensus 183 ~~eVyss~--~~~W~~~~~~~~~~~~~~~~~~~v--~~~G~-lywl~~~~~~~~~~il~fD~~~e-~~---~~i~~P~~~ 253 (362)
.+.+|+.. ++.++.+........ ...+ .-+|. +|..... ...|..+|+.++ .. ..++.....
T Consensus 61 ~v~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~s~dg~~l~~~~~~----~~~i~~~d~~~~~~~~~~~~~~~~~~~ 131 (343)
T 1ri6_A 61 RVLAYRIAPDDGALTFAAESALPGS-----LTHISTDHQGQFVFVGSYN----AGNVSVTRLEDGLPVGVVDVVEGLDGC 131 (343)
T ss_dssp EEEEEEECTTTCCEEEEEEEECSSC-----CSEEEECTTSSEEEEEETT----TTEEEEEEEETTEEEEEEEEECCCTTB
T ss_pred eEEEEEecCCCCceeeccccccCCC-----CcEEEEcCCCCEEEEEecC----CCeEEEEECCCCccccccccccCCCCc
Confidence 58888877 677775543221111 1222 23455 4444332 236778887322 22 223322211
Q ss_pred CCCCcEEE-EECCeEEEEEEcCCCCeEEEEEeeC-CeeEEEE--EeCCCCC-ceeeEEEeeCCc-EEEEe-cCCeEEEEe
Q 045569 254 ESTPTILG-IYNHSLCLLLSHNIENYYDIWVMKY-KCWIKQL--SLGPLNG-VRTPLGFWKKGA-FFVHS-TNEQLLLYD 326 (362)
Q Consensus 254 ~~~~~~l~-~~~g~L~l~~~~~~~~~~~IW~l~~-~~W~~~~--~i~~~~~-~~~~~~~~~~g~-il~~~-~~~~~~~yd 326 (362)
..+. .-+|+..++... ....+.+|.++. ....... .+..... ....+.+..+|+ +++.. .++.+..||
T Consensus 132 ----~~~~~s~dg~~l~~~~~-~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~~~~i~~~~ 206 (343)
T 1ri6_A 132 ----HSANISPDNRTLWVPAL-KQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWE 206 (343)
T ss_dssp ----CCCEECTTSSEEEEEEG-GGTEEEEEEECTTSCEEEEEEEEEECSTTCCEEEEEECTTSSEEEEEETTTTEEEEEE
T ss_pred ----eEEEECCCCCEEEEecC-CCCEEEEEEecCCCceeeecccccccCCCCCcceEEECCCCCEEEEEeCCCCEEEEEE
Confidence 1122 224553333332 356899999987 6655544 3332111 223355566776 44444 367899999
Q ss_pred CC--CCcEE
Q 045569 327 PN--TQEMR 333 (362)
Q Consensus 327 ~~--~~~~~ 333 (362)
++ +++++
T Consensus 207 ~~~~~g~~~ 215 (343)
T 1ri6_A 207 LKDPHGNIE 215 (343)
T ss_dssp SSCTTSCCE
T ss_pred ecCCCCcEE
Confidence 85 34443
No 79
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=78.59 E-value=30 Score=29.41 Aligned_cols=201 Identities=6% Similarity=-0.085 Sum_probs=99.8
Q ss_pred eeeeEEEe-ecCceEEEEeCCCcccc-cCCCCCcCCCCcccceeeeeeeeecCCCCCeEEEEEEEEeecccccccCcceE
Q 045569 107 YNGIFCIF-GNNNRITLWNRATKESR-VLPKCTTVFPKYTSIFCKCTGFGLDPMSTDYKLVLIFTLWNEKLDLLYEFSHV 184 (362)
Q Consensus 107 ~~GLl~~~-~~~~~~~V~NP~T~~~~-~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~ 184 (362)
.++.+.+. .....+.++|+.|++.. .++......... .......++.+++..+. ++... ... ...+
T Consensus 99 dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~s~dg~~--l~~~~--~~~-------~~~i 166 (353)
T 3vgz_A 99 TTQTLWFGNTVNSAVTAIDAKTGEVKGRLVLDDRKRTEE-VRPLQPRELVADDATNT--VYISG--IGK-------ESVI 166 (353)
T ss_dssp TTTEEEEEETTTTEEEEEETTTCCEEEEEESCCCCCCSS-CCCCEEEEEEEETTTTE--EEEEE--ESS-------SCEE
T ss_pred CCCEEEEEecCCCEEEEEeCCCCeeEEEEecCCCccccc-cCCCCCceEEECCCCCE--EEEEe--cCC-------CceE
Confidence 33445544 44567999999998753 333321111000 00011456777775542 22211 111 1358
Q ss_pred EEEECCCCCce-ecccCCCccccccCCcceEEECceEEEEeeccCCCccEEEEEEcCCceee-eecCCCCCCCCC-cEEE
Q 045569 185 AVYSLSTNSWR-YCDCFKSNHYYMDGAFDSVYLDGVCYWLSEFRDNDHKVILSFHLGNEVFE-EIQEPYIPESTP-TILG 261 (362)
Q Consensus 185 eVyss~~~~W~-~~~~~~~~~~~~~~~~~~v~~~G~lywl~~~~~~~~~~il~fD~~~e~~~-~i~~P~~~~~~~-~~l~ 261 (362)
.+++..++.=. .++.. ...+. .-.+.-+|...+.... ...|..+|+.+.+.. .+..+....... ..+.
T Consensus 167 ~~~d~~~~~~~~~~~~~-~~~~~----~~~~s~dg~~l~~~~~----~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (353)
T 3vgz_A 167 WVVDGGNIKLKTAIQNT-GKMST----GLALDSEGKRLYTTNA----DGELITIDTADNKILSRKKLLDDGKEHFFINIS 237 (353)
T ss_dssp EEEETTTTEEEEEECCC-CTTCC----CCEEETTTTEEEEECT----TSEEEEEETTTTEEEEEEECCCSSSCCCEEEEE
T ss_pred EEEcCCCCceEEEecCC-CCccc----eEEECCCCCEEEEEcC----CCeEEEEECCCCeEEEEEEcCCCCCCcccceEE
Confidence 88888765322 12101 00111 2223335654333332 237889999887664 445533211111 2233
Q ss_pred EE-CCe-EEEEEEcCCCCeEEEEEeeCCeeEEEEEeCCCCCceeeEEEeeCCc-EEEEe-cCCeEEEEeCCCCcEEE
Q 045569 262 IY-NHS-LCLLLSHNIENYYDIWVMKYKCWIKQLSLGPLNGVRTPLGFWKKGA-FFVHS-TNEQLLLYDPNTQEMRD 334 (362)
Q Consensus 262 ~~-~g~-L~l~~~~~~~~~~~IW~l~~~~W~~~~~i~~~~~~~~~~~~~~~g~-il~~~-~~~~~~~yd~~~~~~~~ 334 (362)
.. +|+ |++... ....+.+|-++..+-.....++. ...+.+..+|+ +++.. .++.+..||.++++...
T Consensus 238 ~s~dg~~l~~~~~--~~~~v~~~d~~~~~~~~~~~~~~----~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~ 308 (353)
T 3vgz_A 238 LDTARQRAFITDS--KAAEVLVVDTRNGNILAKVAAPE----SLAVLFNPARNEAYVTHRQAGKVSVIDAKSYKVVK 308 (353)
T ss_dssp EETTTTEEEEEES--SSSEEEEEETTTCCEEEEEECSS----CCCEEEETTTTEEEEEETTTTEEEEEETTTTEEEE
T ss_pred ECCCCCEEEEEeC--CCCEEEEEECCCCcEEEEEEcCC----CceEEECCCCCEEEEEECCCCeEEEEECCCCeEEE
Confidence 33 455 544432 45788888776543333333332 12355566776 55555 36789999999887643
No 80
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=78.58 E-value=15 Score=35.86 Aligned_cols=137 Identities=12% Similarity=-0.009 Sum_probs=66.4
Q ss_pred eEEEEECCCCCceecccCCCccccccCCcceEEE---CceEEEEeeccCCCccEEEEEEcCCceeeeecCCCCCCCCCcE
Q 045569 183 HVAVYSLSTNSWRYCDCFKSNHYYMDGAFDSVYL---DGVCYWLSEFRDNDHKVILSFHLGNEVFEEIQEPYIPESTPTI 259 (362)
Q Consensus 183 ~~eVyss~~~~W~~~~~~~~~~~~~~~~~~~v~~---~G~lywl~~~~~~~~~~il~fD~~~e~~~~i~~P~~~~~~~~~ 259 (362)
.+.+++..+..-+.+.... .. ...++.+ +|.|||..... ...|.++|+....-..+-. ..... ...
T Consensus 476 ~I~v~d~dg~~~~~l~~~~--~~----~P~giavDp~~g~ly~td~~~---~~~I~~~~~dG~~~~~l~~-~~l~~-PnG 544 (699)
T 1n7d_A 476 TVSVADTKGVKRKTLFREQ--GS----KPRAIVVDPVHGFMYWTDWGT---PAKIKKGGLNGVDIYSLVT-ENIQW-PNG 544 (699)
T ss_dssp CEEEEBSSSCCEEEECCCS--SC----CCCCEECCSSSSCCEECCCSS---SCCEEBCCSSSCCCCEESC-SSCSS-CCC
T ss_pred eEEEEecCCCceEEEEeCC--CC----CcceEEEccCCCcEEEcccCC---CCeEEEEeCCCCCeeEEEe-CCCCC-ccE
Confidence 4777777654333322111 11 1344555 68999987532 2468888876543333211 01111 112
Q ss_pred EEE--ECCeEEEEEEcCCCCeEEEEEeeCCeeEEEEEeCCCCCceeeEEEee-CCcEEEEec-CCeEEEEeCCCCcEEE
Q 045569 260 LGI--YNHSLCLLLSHNIENYYDIWVMKYKCWIKQLSLGPLNGVRTPLGFWK-KGAFFVHST-NEQLLLYDPNTQEMRD 334 (362)
Q Consensus 260 l~~--~~g~L~l~~~~~~~~~~~IW~l~~~~W~~~~~i~~~~~~~~~~~~~~-~g~il~~~~-~~~~~~yd~~~~~~~~ 334 (362)
|+. .+++|+++.. ....|.+.-++... .+ ..+.....+..|.++.- .+.||+... .++|..+|+.+++..+
T Consensus 545 lavd~~~~~LY~aD~--~~~~I~~~d~dG~~-~~-~~~~~~~~~~~P~glavd~~~lywtd~~~~~V~~~d~~~G~~~~ 619 (699)
T 1n7d_A 545 ITLDLLSGRLYWVDS--KLHSISSIDVNGGN-RK-TILEDEKRLAHPFSLAVFEDKVFWTDIINEAIFSANRLTGSDVN 619 (699)
T ss_dssp EEECTTTCCEEEEET--TTTEEEEECSSSSC-CE-EECCCSSSCSSCCCCEEETTEEEEECSTTTCEEEEETTTEEEEE
T ss_pred EEEeccCCEEEEEec--CCCeEEEEccCCCc-eE-EEEecCCcCCCceEeEEECCEEEEEeCCCCeEEEEEccCCCceE
Confidence 443 3678887765 34454444443311 11 11111112334443332 345666543 5679999988766543
No 81
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=78.25 E-value=29 Score=29.13 Aligned_cols=101 Identities=6% Similarity=-0.010 Sum_probs=59.1
Q ss_pred CceEEEEeeccCCCccEEEEEEcCCceeeeecCCCCCCCCCcEEEE-ECCeEEEEEEcCCCCeEEEEEeeCCeeEEEEEe
Q 045569 217 DGVCYWLSEFRDNDHKVILSFHLGNEVFEEIQEPYIPESTPTILGI-YNHSLCLLLSHNIENYYDIWVMKYKCWIKQLSL 295 (362)
Q Consensus 217 ~G~lywl~~~~~~~~~~il~fD~~~e~~~~i~~P~~~~~~~~~l~~-~~g~L~l~~~~~~~~~~~IW~l~~~~W~~~~~i 295 (362)
+|.+||..... ..|..+|+.+.+...+..|... ..++. -+|+|.+.. ...+.+|-.+...+......
T Consensus 24 ~~~l~~~d~~~----~~i~~~d~~~~~~~~~~~~~~~----~~i~~~~dG~l~v~~----~~~l~~~d~~~g~~~~~~~~ 91 (297)
T 3g4e_A 24 SNSLLFVDIPA----KKVCRWDSFTKQVQRVTMDAPV----SSVALRQSGGYVATI----GTKFCALNWKEQSAVVLATV 91 (297)
T ss_dssp TTEEEEEETTT----TEEEEEETTTCCEEEEECSSCE----EEEEEBTTSSEEEEE----TTEEEEEETTTTEEEEEEEC
T ss_pred CCEEEEEECCC----CEEEEEECCCCcEEEEeCCCce----EEEEECCCCCEEEEE----CCeEEEEECCCCcEEEEEec
Confidence 47899987653 4799999998877777665432 23333 367765443 24555555444555555444
Q ss_pred CCCCCcee--eEEEeeCCcEEEEec------------CCeEEEEeCCC
Q 045569 296 GPLNGVRT--PLGFWKKGAFFVHST------------NEQLLLYDPNT 329 (362)
Q Consensus 296 ~~~~~~~~--~~~~~~~g~il~~~~------------~~~~~~yd~~~ 329 (362)
........ -+.+..+|.+++... ...++.+|++.
T Consensus 92 ~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g 139 (297)
T 3g4e_A 92 DNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDH 139 (297)
T ss_dssp CTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTS
T ss_pred CCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCC
Confidence 32111222 244456788877542 23688888764
No 82
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=78.13 E-value=30 Score=29.08 Aligned_cols=186 Identities=14% Similarity=0.177 Sum_probs=93.2
Q ss_pred ee-eEEEeecCceEEEEeCCCcccccCCCCCcCCCCcccceeeeeeeeecCCCCCeEEEEEEEEeecccccccCcceEEE
Q 045569 108 NG-IFCIFGNNNRITLWNRATKESRVLPKCTTVFPKYTSIFCKCTGFGLDPMSTDYKLVLIFTLWNEKLDLLYEFSHVAV 186 (362)
Q Consensus 108 ~G-Ll~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~eV 186 (362)
+| +|+..+.++.+.+||..+++......... ... ....+.+.+.. .+ ++... . ...+.+
T Consensus 108 ~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~--~~~-----~i~~~~~~~~~-~~-l~~~~---~--------dg~v~~ 167 (337)
T 1gxr_A 108 DGCTLIVGGEASTLSIWDLAAPTPRIKAELTS--SAP-----ACYALAISPDS-KV-CFSCC---S--------DGNIAV 167 (337)
T ss_dssp TSSEEEEEESSSEEEEEECCCC--EEEEEEEC--SSS-----CEEEEEECTTS-SE-EEEEE---T--------TSCEEE
T ss_pred CCCEEEEEcCCCcEEEEECCCCCcceeeeccc--CCC-----ceEEEEECCCC-CE-EEEEe---C--------CCcEEE
Confidence 44 44444666679999998876332211111 111 14556666632 22 22221 1 125888
Q ss_pred EECCCCCcee-cccCCCccccccCCcceEEE--CceEEEEeeccCCCccEEEEEEcCCceee-eecCCCCCCCCCcEEEE
Q 045569 187 YSLSTNSWRY-CDCFKSNHYYMDGAFDSVYL--DGVCYWLSEFRDNDHKVILSFHLGNEVFE-EIQEPYIPESTPTILGI 262 (362)
Q Consensus 187 yss~~~~W~~-~~~~~~~~~~~~~~~~~v~~--~G~lywl~~~~~~~~~~il~fD~~~e~~~-~i~~P~~~~~~~~~l~~ 262 (362)
|+.+++.-.. ..... .. -..+.+ +|........ ...|..+|+.+.+-. .+..+... ..+..
T Consensus 168 ~d~~~~~~~~~~~~~~--~~-----i~~~~~~~~~~~l~~~~~----dg~i~~~d~~~~~~~~~~~~~~~v----~~~~~ 232 (337)
T 1gxr_A 168 WDLHNQTLVRQFQGHT--DG-----ASCIDISNDGTKLWTGGL----DNTVRSWDLREGRQLQQHDFTSQI----FSLGY 232 (337)
T ss_dssp EETTTTEEEEEECCCS--SC-----EEEEEECTTSSEEEEEET----TSEEEEEETTTTEEEEEEECSSCE----EEEEE
T ss_pred EeCCCCceeeeeeccc--Cc-----eEEEEECCCCCEEEEEec----CCcEEEEECCCCceEeeecCCCce----EEEEE
Confidence 9888764322 11110 00 122222 4544444332 347889998876543 33322211 22332
Q ss_pred -ECCeEEEEEEcCCCCeEEEEEeeCCeeEEEEEeCCCCCceeeEEEeeCCcEEEEe-cCCeEEEEeCCCCcEE
Q 045569 263 -YNHSLCLLLSHNIENYYDIWVMKYKCWIKQLSLGPLNGVRTPLGFWKKGAFFVHS-TNEQLLLYDPNTQEMR 333 (362)
Q Consensus 263 -~~g~L~l~~~~~~~~~~~IW~l~~~~W~~~~~i~~~~~~~~~~~~~~~g~il~~~-~~~~~~~yd~~~~~~~ 333 (362)
.+|.+.+++. ....+.+|.++... ...+.........+.+..+++.++.. .++.+..||.++++..
T Consensus 233 s~~~~~l~~~~--~~~~i~~~~~~~~~---~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~ 300 (337)
T 1gxr_A 233 CPTGEWLAVGM--ESSNVEVLHVNKPD---KYQLHLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGASI 300 (337)
T ss_dssp CTTSSEEEEEE--TTSCEEEEETTSSC---EEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEE
T ss_pred CCCCCEEEEEc--CCCcEEEEECCCCC---eEEEcCCccceeEEEECCCCCEEEEecCCCcEEEEECCCCeEE
Confidence 2555555554 35689999987722 12232222223344555567765554 4788999999988765
No 83
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=77.87 E-value=35 Score=29.76 Aligned_cols=192 Identities=11% Similarity=0.004 Sum_probs=98.5
Q ss_pred eeeeeEEEee-cCceEEEEeCCCcccccCCCCCcCCCCcccceeeeeeeeecCCCCCeEEEEEEEEeecccccccCcceE
Q 045569 106 PYNGIFCIFG-NNNRITLWNRATKESRVLPKCTTVFPKYTSIFCKCTGFGLDPMSTDYKLVLIFTLWNEKLDLLYEFSHV 184 (362)
Q Consensus 106 s~~GLl~~~~-~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~ 184 (362)
..+|.|.+.+ ...+++.+++.++....+..... .. ..|+++|+..+.-. ... .. ...+
T Consensus 82 ~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~---~~------p~glavd~~~g~ly--~~d--~~--------~~~I 140 (349)
T 3v64_C 82 HRRELVFWSDVTLDRILRANLNGSNVEEVVSTGL---ES------PGGLAVDWVHDKLY--WTD--SG--------TSRI 140 (349)
T ss_dssp TTTTEEEEEETTTTEEEEEETTSCSCEEEECSSC---SC------CCEEEEETTTTEEE--EEE--TT--------TTEE
T ss_pred ccccEEEEEeccCCceEEEecCCCCceEEEeCCC---CC------ccEEEEecCCCeEE--EEc--CC--------CCeE
Confidence 3567777763 44568888888766444322211 11 46778887555322 221 00 2357
Q ss_pred EEEECCCCCceecccCCCccccccCCcceEEE---CceEEEEeeccCCCccEEEEEEcCCceeeeecCCCCCCCCCcEEE
Q 045569 185 AVYSLSTNSWRYCDCFKSNHYYMDGAFDSVYL---DGVCYWLSEFRDNDHKVILSFHLGNEVFEEIQEPYIPESTPTILG 261 (362)
Q Consensus 185 eVyss~~~~W~~~~~~~~~~~~~~~~~~~v~~---~G~lywl~~~~~~~~~~il~fD~~~e~~~~i~~P~~~~~~~~~l~ 261 (362)
++++.....-+.+... .+. ...++.+ +|.+||..... ...|..+|+....-..+ +..... ...-|+
T Consensus 141 ~~~~~dG~~~~~l~~~--~l~----~P~~iavdp~~g~ly~td~~~---~~~I~r~~~dG~~~~~~-~~~~~~-~PnGla 209 (349)
T 3v64_C 141 EVANLDGAHRKVLLWQ--SLE----KPRAIALHPMEGTIYWTDWGN---TPRIEASSMDGSGRRII-ADTHLF-WPNGLT 209 (349)
T ss_dssp EEEETTSCSCEEEECT--TCS----CEEEEEEETTTTEEEEEECSS---SCEEEEEETTSCSCEES-CCSSCS-CEEEEE
T ss_pred EEEcCCCCceEEEEeC--CCC----CcceEEEecCcCeEEEeccCC---CCEEEEEeCCCCCcEEE-EECCCC-CcceEE
Confidence 8888765433322211 111 1334444 58999998653 35899999876543333 111111 112344
Q ss_pred E--ECCeEEEEEEcCCCCeEEEEEeeCCeeEEEEEeCCCCCceeeEEEe-eCCcEEEEec-CCeEEEEeCCCCc-EEEe
Q 045569 262 I--YNHSLCLLLSHNIENYYDIWVMKYKCWIKQLSLGPLNGVRTPLGFW-KKGAFFVHST-NEQLLLYDPNTQE-MRDL 335 (362)
Q Consensus 262 ~--~~g~L~l~~~~~~~~~~~IW~l~~~~W~~~~~i~~~~~~~~~~~~~-~~g~il~~~~-~~~~~~yd~~~~~-~~~v 335 (362)
. .+|+|+++.. ....|...-++... .+. .+.. ....|.++. .++.+|+... .+++..+|..+++ .+.+
T Consensus 210 ~d~~~~~lY~aD~--~~~~I~~~~~dG~~-~~~-~~~~--~~~~P~giav~~~~ly~td~~~~~V~~~~~~~G~~~~~i 282 (349)
T 3v64_C 210 IDYAGRRMYWVDA--KHHVIERANLDGSH-RKA-VISQ--GLPHPFAITVFEDSLYWTDWHTKSINSANKFTGKNQEII 282 (349)
T ss_dssp EETTTTEEEEEET--TTTEEEEEETTSCS-CEE-EECS--SCSSEEEEEEETTEEEEEETTTTEEEEEETTTCCSCEEE
T ss_pred EeCCCCEEEEEEC--CCCEEEEEeCCCCc-eEE-EEeC--CCCCceEEEEECCEEEEecCCCCeEEEEEccCCCccEEe
Confidence 4 3778888765 33444444444311 111 1221 133454332 4567777654 6679999965544 3434
No 84
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=77.37 E-value=39 Score=30.11 Aligned_cols=184 Identities=10% Similarity=0.015 Sum_probs=94.1
Q ss_pred ceEEEEeCCCcccccCCCCCcCCCCcccceeeeeeeeecCCCCCeEEEEEEEEeecccccccCcceEEEEECCCCCceec
Q 045569 118 NRITLWNRATKESRVLPKCTTVFPKYTSIFCKCTGFGLDPMSTDYKLVLIFTLWNEKLDLLYEFSHVAVYSLSTNSWRYC 197 (362)
Q Consensus 118 ~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~eVyss~~~~W~~~ 197 (362)
..++++|..|++...+..... . ...+.+.|..+ + ++.... .+ ....+.+++..++..+.+
T Consensus 203 ~~i~~~d~~tg~~~~l~~~~~----~------~~~~~~spdg~-~-la~~~~--~~------g~~~i~~~d~~~~~~~~l 262 (415)
T 2hqs_A 203 SALVIQTLANGAVRQVASFPR----H------NGAPAFSPDGS-K-LAFALS--KT------GSLNLYVMDLASGQIRQV 262 (415)
T ss_dssp CEEEEEETTTCCEEEEECCSS----C------EEEEEECTTSS-E-EEEEEC--TT------SSCEEEEEETTTCCEEEC
T ss_pred cEEEEEECCCCcEEEeecCCC----c------ccCEEEcCCCC-E-EEEEEe--cC------CCceEEEEECCCCCEEeC
Confidence 479999999988766543221 1 45566666432 2 222210 11 124688889888776555
Q ss_pred ccCCCccccccCCcceEE--ECce-EEEEeeccCCCccEEEEEEcCCceeeeecCCCCCCCCCcEEE-EECCeEEEEE-E
Q 045569 198 DCFKSNHYYMDGAFDSVY--LDGV-CYWLSEFRDNDHKVILSFHLGNEVFEEIQEPYIPESTPTILG-IYNHSLCLLL-S 272 (362)
Q Consensus 198 ~~~~~~~~~~~~~~~~v~--~~G~-lywl~~~~~~~~~~il~fD~~~e~~~~i~~P~~~~~~~~~l~-~~~g~L~l~~-~ 272 (362)
..... . ...+. -+|. ++...... ....|..+|+.+.+...+..... ....+. .-+|+..++. .
T Consensus 263 ~~~~~--~-----~~~~~~spdg~~l~~~s~~~--g~~~i~~~d~~~~~~~~l~~~~~---~~~~~~~spdG~~l~~~~~ 330 (415)
T 2hqs_A 263 TDGRS--N-----NTEPTWFPDSQNLAFTSDQA--GRPQVYKVNINGGAPQRITWEGS---QNQDADVSSDGKFMVMVSS 330 (415)
T ss_dssp CCCSS--C-----EEEEEECTTSSEEEEEECTT--SSCEEEEEETTSSCCEECCCSSS---EEEEEEECTTSSEEEEEEE
T ss_pred cCCCC--c-----ccceEECCCCCEEEEEECCC--CCcEEEEEECCCCCEEEEecCCC---cccCeEECCCCCEEEEEEC
Confidence 43211 0 11122 2454 44444322 13478888998876554432211 001222 2356643333 3
Q ss_pred cCCCCeEEEEEeeCCeeEEEEEeCCCCCceeeEEEeeCCcEEE-EecCC---eEEEEeCCCCcEEEeeE
Q 045569 273 HNIENYYDIWVMKYKCWIKQLSLGPLNGVRTPLGFWKKGAFFV-HSTNE---QLLLYDPNTQEMRDLGR 337 (362)
Q Consensus 273 ~~~~~~~~IW~l~~~~W~~~~~i~~~~~~~~~~~~~~~g~il~-~~~~~---~~~~yd~~~~~~~~v~~ 337 (362)
......+.+|-++..... .+.... ....+.+..+|+.++ ...++ .+..+|++++..+.+.-
T Consensus 331 ~~g~~~i~~~d~~~~~~~---~l~~~~-~~~~~~~spdg~~l~~~s~~~~~~~l~~~d~~g~~~~~l~~ 395 (415)
T 2hqs_A 331 NGGQQHIAKQDLATGGVQ---VLSSTF-LDETPSLAPNGTMVIYSSSQGMGSVLNLVSTDGRFKARLPA 395 (415)
T ss_dssp CSSCEEEEEEETTTCCEE---ECCCSS-SCEEEEECTTSSEEEEEEEETTEEEEEEEETTSCCEEECCC
T ss_pred cCCceEEEEEECCCCCEE---EecCCC-CcCCeEEcCCCCEEEEEEcCCCccEEEEEECCCCcEEEeeC
Confidence 222346666666554332 232211 223344556777544 33333 79999999888777653
No 85
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=77.03 E-value=32 Score=29.25 Aligned_cols=69 Identities=9% Similarity=0.077 Sum_probs=41.6
Q ss_pred CeEEEEEEcCCCCeEEEEEeeCCeeEEEEEeCCCCCceeeEEEeeCCcEEEEe-cCCeEEEEeCCCCcEEEe
Q 045569 265 HSLCLLLSHNIENYYDIWVMKYKCWIKQLSLGPLNGVRTPLGFWKKGAFFVHS-TNEQLLLYDPNTQEMRDL 335 (362)
Q Consensus 265 g~L~l~~~~~~~~~~~IW~l~~~~W~~~~~i~~~~~~~~~~~~~~~g~il~~~-~~~~~~~yd~~~~~~~~v 335 (362)
|.+.+++. ....+.||.++.........+.....-...+.+..++..++.. .++.+.+||.++++...+
T Consensus 54 g~~l~~~~--~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~ 123 (368)
T 3mmy_A 54 GNFLIAGS--WANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFTASCDKTAKMWDLSSNQAIQI 123 (368)
T ss_dssp SEEEEEEE--TTSEEEEEEECTTSCEEEEEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEE
T ss_pred ceEEEEEC--CCCcEEEEEcCCCCceeEEEeccccCCEEEEEECcCCCEEEEEcCCCcEEEEEcCCCCceee
Confidence 46555555 4578999999872223323332212222344555567665544 478899999999886654
No 86
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=76.92 E-value=32 Score=28.78 Aligned_cols=194 Identities=9% Similarity=0.044 Sum_probs=94.2
Q ss_pred cCceEEEEeCCCcccccCCCCCcCCCCcccceeeeeeeeecCCCCCeEEEEEEEEeecccccccCcceEEEEECCCCCce
Q 045569 116 NNNRITLWNRATKESRVLPKCTTVFPKYTSIFCKCTGFGLDPMSTDYKLVLIFTLWNEKLDLLYEFSHVAVYSLSTNSWR 195 (362)
Q Consensus 116 ~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~eVyss~~~~W~ 195 (362)
....++++||.+++...+..+...... ....++.+|+..+. +.... . ...+.+|+.. +..+
T Consensus 44 ~~~~i~~~d~~~g~~~~~~~~~~~~~~-----~~~~~i~~~~~~g~--l~v~~---~--------~~~l~~~d~~-g~~~ 104 (314)
T 1pjx_A 44 PAGEILRIDLKTGKKTVICKPEVNGYG-----GIPAGCQCDRDANQ--LFVAD---M--------RLGLLVVQTD-GTFE 104 (314)
T ss_dssp ECCEEEEECTTTCCEEEEECCEETTEE-----CCEEEEEECSSSSE--EEEEE---T--------TTEEEEEETT-SCEE
T ss_pred CCCEEEEEeCCCCcEEEEEecccCCCC-----CCCceEEEecCCCc--EEEEE---C--------CCCEEEEeCC-CCEE
Confidence 345689999998887655331110000 11467777765232 22221 0 1147778877 6655
Q ss_pred ec-ccCCCccccccCCcceEEE--CceEEEEeeccC-----------CCccEEEEEEcCCceeeeecCCCCCCCCCcEEE
Q 045569 196 YC-DCFKSNHYYMDGAFDSVYL--DGVCYWLSEFRD-----------NDHKVILSFHLGNEVFEEIQEPYIPESTPTILG 261 (362)
Q Consensus 196 ~~-~~~~~~~~~~~~~~~~v~~--~G~lywl~~~~~-----------~~~~~il~fD~~~e~~~~i~~P~~~~~~~~~l~ 261 (362)
.. .......+. .....+.+ +|.+|....... .....|..+|.. +++..+.-.. .. ...++
T Consensus 105 ~~~~~~~~~~~~--~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~~--~~-~~~i~ 178 (314)
T 1pjx_A 105 EIAKKDSEGRRM--QGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQVDTAF--QF-PNGIA 178 (314)
T ss_dssp ECCSBCTTSCBC--BCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEEEEEEE--SS-EEEEE
T ss_pred EEEeccCCCccc--cCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-CCEEEeccCC--CC-cceEE
Confidence 44 221111110 01233443 577766554310 001478999987 5554431100 00 01233
Q ss_pred E-----ECCe-EEEEEEcCCCCeEEEEEee-CCeeEEEEE---eCCCC-CceeeEEEeeCCcEEEEe-cCCeEEEEeCCC
Q 045569 262 I-----YNHS-LCLLLSHNIENYYDIWVMK-YKCWIKQLS---LGPLN-GVRTPLGFWKKGAFFVHS-TNEQLLLYDPNT 329 (362)
Q Consensus 262 ~-----~~g~-L~l~~~~~~~~~~~IW~l~-~~~W~~~~~---i~~~~-~~~~~~~~~~~g~il~~~-~~~~~~~yd~~~ 329 (362)
. -+|+ |++... ....+.+|.++ +........ +.... ....-+++..+|.+++.. ..+.+..||+++
T Consensus 179 ~~~~~d~dg~~l~v~~~--~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~~~~~~i~~~d~~~ 256 (314)
T 1pjx_A 179 VRHMNDGRPYQLIVAET--PTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNLLVANWGSSHIEVFGPDG 256 (314)
T ss_dssp EEECTTSCEEEEEEEET--TTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCEEEEEETTTEEEEECTTC
T ss_pred EecccCCCCCEEEEEEC--CCCeEEEEECCCCCccccceEEEECCCCCCCCCCceEECCCCCEEEEEcCCCEEEEEcCCC
Confidence 2 3453 554443 34677777776 344332222 22111 222334555678888875 367899999985
Q ss_pred Cc-EEEee
Q 045569 330 QE-MRDLG 336 (362)
Q Consensus 330 ~~-~~~v~ 336 (362)
++ ...+.
T Consensus 257 g~~~~~~~ 264 (314)
T 1pjx_A 257 GQPKMRIR 264 (314)
T ss_dssp BSCSEEEE
T ss_pred CcEeEEEe
Confidence 54 34343
No 87
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=75.93 E-value=35 Score=28.80 Aligned_cols=189 Identities=7% Similarity=-0.084 Sum_probs=92.2
Q ss_pred eEEEeecCceEEEEeC-CCcccccCCCCCcCCCCcccceeeeeeeeecCCCCCeEEEEEEEEeecccccccCcceEEEEE
Q 045569 110 IFCIFGNNNRITLWNR-ATKESRVLPKCTTVFPKYTSIFCKCTGFGLDPMSTDYKLVLIFTLWNEKLDLLYEFSHVAVYS 188 (362)
Q Consensus 110 Ll~~~~~~~~~~V~NP-~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~eVys 188 (362)
+|+..+.++.+.+||. .+++...+..... ... ...+.+.+ +.+-+..- . ...+.+++
T Consensus 71 ~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~--~~~------v~~l~~~~--~~~l~s~~-----~-------d~~i~iwd 128 (342)
T 1yfq_A 71 QIYVGTVQGEILKVDLIGSPSFQALTNNEA--NLG------ICRICKYG--DDKLIAAS-----W-------DGLIEVID 128 (342)
T ss_dssp EEEEEETTSCEEEECSSSSSSEEECBSCCC--CSC------EEEEEEET--TTEEEEEE-----T-------TSEEEEEC
T ss_pred EEEEEcCCCeEEEEEeccCCceEeccccCC--CCc------eEEEEeCC--CCEEEEEc-----C-------CCeEEEEc
Confidence 3444466677999999 8887765543111 111 45666776 33332221 1 12477777
Q ss_pred CCCCC-------ceecccCCCccccccCCcceEEECceEEEEeeccCCCccEEEEEEcCC-ce--eeeecCCCCCCCCCc
Q 045569 189 LSTNS-------WRYCDCFKSNHYYMDGAFDSVYLDGVCYWLSEFRDNDHKVILSFHLGN-EV--FEEIQEPYIPESTPT 258 (362)
Q Consensus 189 s~~~~-------W~~~~~~~~~~~~~~~~~~~v~~~G~lywl~~~~~~~~~~il~fD~~~-e~--~~~i~~P~~~~~~~~ 258 (362)
.++.. .+.+.... .. ....++.+++.-...... ...|..+|+.+ .. ......+.... ..
T Consensus 129 ~~~~~~~~~~~~~~~~~~~~--~~---~~v~~~~~~~~~l~~~~~----d~~i~i~d~~~~~~~~~~~~~~~~~~~--i~ 197 (342)
T 1yfq_A 129 PRNYGDGVIAVKNLNSNNTK--VK---NKIFTMDTNSSRLIVGMN----NSQVQWFRLPLCEDDNGTIEESGLKYQ--IR 197 (342)
T ss_dssp HHHHTTBCEEEEESCSSSSS--SC---CCEEEEEECSSEEEEEES----TTEEEEEESSCCTTCCCEEEECSCSSC--EE
T ss_pred ccccccccccccCCeeeEEe--eC---CceEEEEecCCcEEEEeC----CCeEEEEECCccccccceeeecCCCCc--ee
Confidence 65400 11111111 00 012233333332222222 34788899887 32 33333222111 12
Q ss_pred EEEEE--CCeEEEEEEcCCCCeEEEEEeeCC--e--eEEEEEeCCCCC---------ceeeEEEeeCCcEEEE-ecCCeE
Q 045569 259 ILGIY--NHSLCLLLSHNIENYYDIWVMKYK--C--WIKQLSLGPLNG---------VRTPLGFWKKGAFFVH-STNEQL 322 (362)
Q Consensus 259 ~l~~~--~g~L~l~~~~~~~~~~~IW~l~~~--~--W~~~~~i~~~~~---------~~~~~~~~~~g~il~~-~~~~~~ 322 (362)
.+... +|.+.+++. ....+.||.++.. . ......+..... ....+.+..++.+++. ..++.+
T Consensus 198 ~i~~~~~~~~~l~~~~--~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i 275 (342)
T 1yfq_A 198 DVALLPKEQEGYACSS--IDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGII 275 (342)
T ss_dssp EEEECSGGGCEEEEEE--TTSEEEEEECCTTCCSTTCTTCEEEECCCCCTTCCSSCCCEEEEEECTTTCCEEEEETTSCE
T ss_pred EEEECCCCCCEEEEEe--cCCcEEEEEEcCCCcccccccceeeecccccccccccceeEEEEEEcCCCCEEEEecCCceE
Confidence 33333 466666555 4678999998653 1 122223322111 1233445556665554 447789
Q ss_pred EEEeCCCCcEE
Q 045569 323 LLYDPNTQEMR 333 (362)
Q Consensus 323 ~~yd~~~~~~~ 333 (362)
.+||.++++..
T Consensus 276 ~vwd~~~~~~~ 286 (342)
T 1yfq_A 276 SCWNLQTRKKI 286 (342)
T ss_dssp EEEETTTTEEE
T ss_pred EEEcCccHhHh
Confidence 99999987643
No 88
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=75.33 E-value=32 Score=28.04 Aligned_cols=199 Identities=11% Similarity=-0.007 Sum_probs=94.7
Q ss_pred eeeeeEEEeecCceEEEEeCCC-cccccCCCCCcCCCCcccceeeeeeeeecCCCCCeEEEEEEEEeecccccccCcceE
Q 045569 106 PYNGIFCIFGNNNRITLWNRAT-KESRVLPKCTTVFPKYTSIFCKCTGFGLDPMSTDYKLVLIFTLWNEKLDLLYEFSHV 184 (362)
Q Consensus 106 s~~GLl~~~~~~~~~~V~NP~T-~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~ 184 (362)
+-+|-.++......++++|..+ ++...+...... .. ...+.+.|.. .+ ++... ... .....+
T Consensus 50 spdg~~l~~~~~~~i~~~d~~~~~~~~~~~~~~~~--~~------~~~~~~spdg-~~-l~~~~--~~~-----~~~~~l 112 (297)
T 2ojh_A 50 SPDGKYLLLNSEGLLYRLSLAGDPSPEKVDTGFAT--IC------NNDHGISPDG-AL-YAISD--KVE-----FGKSAI 112 (297)
T ss_dssp CTTSSEEEEEETTEEEEEESSSCCSCEECCCTTCC--CB------CSCCEECTTS-SE-EEEEE--CTT-----TSSCEE
T ss_pred CCCCCEEEEEcCCeEEEEeCCCCCCceEecccccc--cc------ccceEECCCC-CE-EEEEE--eCC-----CCcceE
Confidence 3344444443345699999999 877666543211 11 2345555543 22 22221 001 012456
Q ss_pred EEEECCCCCceecccCCCccccccCCcceEEECce-EEEEeeccCCCccEEEEEEcCCceeeeecCCCCCCCCCcEEEE-
Q 045569 185 AVYSLSTNSWRYCDCFKSNHYYMDGAFDSVYLDGV-CYWLSEFRDNDHKVILSFHLGNEVFEEIQEPYIPESTPTILGI- 262 (362)
Q Consensus 185 eVyss~~~~W~~~~~~~~~~~~~~~~~~~v~~~G~-lywl~~~~~~~~~~il~fD~~~e~~~~i~~P~~~~~~~~~l~~- 262 (362)
.+++..++.-+.+....... .....-+|. +++..... ....|..+|+.+.....+..... . ...+..
T Consensus 113 ~~~~~~~~~~~~~~~~~~~~------~~~~spdg~~l~~~~~~~--~~~~l~~~~~~~~~~~~~~~~~~--~-~~~~~~s 181 (297)
T 2ojh_A 113 YLLPSTGGTPRLMTKNLPSY------WHGWSPDGKSFTYCGIRD--QVFDIYSMDIDSGVETRLTHGEG--R-NDGPDYS 181 (297)
T ss_dssp EEEETTCCCCEECCSSSSEE------EEEECTTSSEEEEEEEET--TEEEEEEEETTTCCEEECCCSSS--C-EEEEEEC
T ss_pred EEEECCCCceEEeecCCCcc------ceEECCCCCEEEEEECCC--CceEEEEEECCCCcceEcccCCC--c-cccceEC
Confidence 77777666544443321100 111112443 33333322 13467777777666554432211 1 022222
Q ss_pred ECCeEEEEEEcCCCCeEEEEEeeC--CeeEEEEEeCCCCCceeeEEEeeCCcEEE-EecC-----------CeEEEEeCC
Q 045569 263 YNHSLCLLLSHNIENYYDIWVMKY--KCWIKQLSLGPLNGVRTPLGFWKKGAFFV-HSTN-----------EQLLLYDPN 328 (362)
Q Consensus 263 ~~g~L~l~~~~~~~~~~~IW~l~~--~~W~~~~~i~~~~~~~~~~~~~~~g~il~-~~~~-----------~~~~~yd~~ 328 (362)
-+|+..++... ....+.||.++. .. ...+.........+.+..+|+.++ ...+ ..+..||++
T Consensus 182 ~dg~~l~~~~~-~~~~~~i~~~~~~~~~---~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~l~~~d~~ 257 (297)
T 2ojh_A 182 PDGRWIYFNSS-RTGQMQIWRVRVDGSS---VERITDSAYGDWFPHPSPSGDKVVFVSYDADVFDHPRDLDVRVQLMDMD 257 (297)
T ss_dssp TTSSEEEEEEC-TTSSCEEEEEETTSSC---EEECCCCSEEEEEEEECTTSSEEEEEEEETTCCSCCSSEEEEEEEEETT
T ss_pred CCCCEEEEEec-CCCCccEEEECCCCCC---cEEEecCCcccCCeEECCCCCEEEEEEcCCCCCcccccCceEEEEEecC
Confidence 35664444432 345789999974 22 222332222222344455676544 3322 459999999
Q ss_pred CCcEEEee
Q 045569 329 TQEMRDLG 336 (362)
Q Consensus 329 ~~~~~~v~ 336 (362)
+++.+.+.
T Consensus 258 ~~~~~~~~ 265 (297)
T 2ojh_A 258 GGNVETLF 265 (297)
T ss_dssp SCSCEEEE
T ss_pred CCCceeee
Confidence 98876654
No 89
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=75.31 E-value=37 Score=32.74 Aligned_cols=114 Identities=12% Similarity=0.154 Sum_probs=61.7
Q ss_pred cceEEECceEEEEeeccCCCccEEEEEEcCC--ceeeee-cCCCCC------CCCCcEEEEECCeEEEEEEcCCCCeEEE
Q 045569 211 FDSVYLDGVCYWLSEFRDNDHKVILSFHLGN--EVFEEI-QEPYIP------ESTPTILGIYNHSLCLLLSHNIENYYDI 281 (362)
Q Consensus 211 ~~~v~~~G~lywl~~~~~~~~~~il~fD~~~--e~~~~i-~~P~~~------~~~~~~l~~~~g~L~l~~~~~~~~~~~I 281 (362)
..++..+|.+|...... .+.++|..+ +.|+.- ..+... ......+...+|++++... ...+..
T Consensus 60 ~~P~v~~g~vyv~~~~~-----~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~---dg~l~a 131 (668)
T 1kv9_A 60 ATPLFHDGVIYTSMSWS-----RVIAVDAASGKELWRYDPEVAKVKARTSCCDAVNRGVALWGDKVYVGTL---DGRLIA 131 (668)
T ss_dssp CCCEEETTEEEEEEGGG-----EEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEEBTEEEEECT---TSEEEE
T ss_pred cCCEEECCEEEEECCCC-----eEEEEECCCChhceEECCCCCccccccccccCCccceEEECCEEEEEcC---CCEEEE
Confidence 56688999999987654 799999865 456542 222110 0000123446777765432 233333
Q ss_pred EEeeC--CeeEEEEEeCCCC--CceeeEEEeeCCcEEEEec------CCeEEEEeCCCCcEEE
Q 045569 282 WVMKY--KCWIKQLSLGPLN--GVRTPLGFWKKGAFFVHST------NEQLLLYDPNTQEMRD 334 (362)
Q Consensus 282 W~l~~--~~W~~~~~i~~~~--~~~~~~~~~~~g~il~~~~------~~~~~~yd~~~~~~~~ 334 (362)
+-.+. ..|.....-.... ....|+. .++.+++... ++.++.||.+|++..+
T Consensus 132 lD~~tG~~~W~~~~~~~~~~~~~~~~P~v--~~~~v~vg~~~~~~~~~g~v~a~D~~tG~~~W 192 (668)
T 1kv9_A 132 LDAKTGKAIWSQQTTDPAKPYSITGAPRV--VKGKVIIGNGGAEYGVRGFVSAYDADTGKLAW 192 (668)
T ss_dssp EETTTCCEEEEEECSCTTSSCBCCSCCEE--ETTEEEECCBCTTTCCBCEEEEEETTTCCEEE
T ss_pred EECCCCCEeeeeccCCCCCcceecCCCEE--ECCEEEEeCCCCCcCCCCEEEEEECCCCcEEE
Confidence 33333 5576543111000 1123432 3566666433 3679999999988654
No 90
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=75.25 E-value=43 Score=29.87 Aligned_cols=118 Identities=11% Similarity=0.035 Sum_probs=69.6
Q ss_pred ECceEEEEeeccCCCccEEEEEEcCCceeee---ecC-------CCCCCCCCcEEEE--ECCeEEEEEEcC-----CCCe
Q 045569 216 LDGVCYWLSEFRDNDHKVILSFHLGNEVFEE---IQE-------PYIPESTPTILGI--YNHSLCLLLSHN-----IENY 278 (362)
Q Consensus 216 ~~G~lywl~~~~~~~~~~il~fD~~~e~~~~---i~~-------P~~~~~~~~~l~~--~~g~L~l~~~~~-----~~~~ 278 (362)
.+|.++|.+..+ .+.++|+.++.-.. +.+ +.........++. -+++|++..... ....
T Consensus 236 ~dG~~~~vs~~g-----~V~v~d~~~~~~~v~~~~~~~~~~~~~~g~~p~g~q~~a~~~~~~~lyV~~~~~~~~~hk~~~ 310 (386)
T 3sjl_D 236 KAGRLVWPTYTG-----KIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTAS 310 (386)
T ss_dssp TTTEEEEEBTTS-----EEEEEECTTSSCEECCCEESSCHHHHHTTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSCE
T ss_pred CCCcEEEEeCCC-----EEEEEECCCCcceeecceeccccccccccccCCCcceeeECCCCCeEEEEeccccccccCCCC
Confidence 378999987754 69999998765322 211 0000001112232 356688776421 2235
Q ss_pred EEEEEeeCCeeEEEEEeCCCCCceeeEEEeeCCc-EEEE-ec-CCeEEEEeCCCCcEE-EeeEee
Q 045569 279 YDIWVMKYKCWIKQLSLGPLNGVRTPLGFWKKGA-FFVH-ST-NEQLLLYDPNTQEMR-DLGRKS 339 (362)
Q Consensus 279 ~~IW~l~~~~W~~~~~i~~~~~~~~~~~~~~~g~-il~~-~~-~~~~~~yd~~~~~~~-~v~~~~ 339 (362)
=+||+++-..+..+.+|.... -...+.+..+++ .++. .. ++.+.+||..+++.. .+...+
T Consensus 311 ~~V~viD~~t~kv~~~i~vg~-~~~~lavs~D~~~~ly~tn~~~~~VsViD~~t~k~~~~i~~~~ 374 (386)
T 3sjl_D 311 RFVVVLDAKTGERLAKFEMGH-EIDSINVSQDEKPLLYALSTGDKTLYIHDAESGEELRSVNQLG 374 (386)
T ss_dssp EEEEEEETTTCCEEEEEEEEE-EECEEEECSSSSCEEEEEETTTTEEEEEETTTCCEEEEECCCC
T ss_pred CEEEEEECCCCeEEEEEECCC-CcceEEECCCCCeEEEEEcCCCCeEEEEECCCCcEEEEecCCC
Confidence 689999987777777776432 122455666765 5554 33 678999999988754 455443
No 91
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=75.11 E-value=9.3 Score=33.27 Aligned_cols=137 Identities=9% Similarity=0.124 Sum_probs=64.7
Q ss_pred eEEEEECCCCCceecccCCCccccccCCcceEEE--CceEEEEeeccCCCccEEEEEEcCCce-eeee-cCCCCCCCCCc
Q 045569 183 HVAVYSLSTNSWRYCDCFKSNHYYMDGAFDSVYL--DGVCYWLSEFRDNDHKVILSFHLGNEV-FEEI-QEPYIPESTPT 258 (362)
Q Consensus 183 ~~eVyss~~~~W~~~~~~~~~~~~~~~~~~~v~~--~G~lywl~~~~~~~~~~il~fD~~~e~-~~~i-~~P~~~~~~~~ 258 (362)
.+.||+..++.|+.+.....+-.. -..+.+ +|........ ...|..+|+.++. +... .+.... ....
T Consensus 34 ~i~iw~~~~~~~~~~~~~~~h~~~----v~~~~~s~~~~~l~s~s~----d~~v~vwd~~~~~~~~~~~~~~~~~-~~v~ 104 (377)
T 3dwl_C 34 QVELYEQDGNGWKHARTFSDHDKI----VTCVDWAPKSNRIVTCSQ----DRNAYVYEKRPDGTWKQTLVLLRLN-RAAT 104 (377)
T ss_dssp CBCEEEEETTEEEECCCBCCCSSC----EEEEEECTTTCCEEEEET----TSSEEEC------CCCCEEECCCCS-SCEE
T ss_pred EEEEEEccCCceEEEEEEecCCce----EEEEEEeCCCCEEEEEeC----CCeEEEEEcCCCCceeeeeEecccC-CceE
Confidence 477888888777665443221110 112222 2332222222 2368888888766 3322 121111 1102
Q ss_pred EEEE-ECCeEEEEEEcCCCCeEEEEEeeC-CeeEEEEEeCC-CCCceeeEEEeeCCcEEEEe-cCCeEEEEeCCCC
Q 045569 259 ILGI-YNHSLCLLLSHNIENYYDIWVMKY-KCWIKQLSLGP-LNGVRTPLGFWKKGAFFVHS-TNEQLLLYDPNTQ 330 (362)
Q Consensus 259 ~l~~-~~g~L~l~~~~~~~~~~~IW~l~~-~~W~~~~~i~~-~~~~~~~~~~~~~g~il~~~-~~~~~~~yd~~~~ 330 (362)
.+.. .+|++.+++. ....+.||.++. ..|.....+.. .......+.+..++.+++.. .++.+..||++++
T Consensus 105 ~~~~~~~~~~l~~~~--~d~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~ 178 (377)
T 3dwl_C 105 FVRWSPNEDKFAVGS--GARVISVCYFEQENDWWVSKHLKRPLRSTILSLDWHPNNVLLAAGCADRKAYVLSAYVR 178 (377)
T ss_dssp EEECCTTSSCCEEEE--SSSCEEECCC-----CCCCEEECSSCCSCEEEEEECTTSSEEEEEESSSCEEEEEECCS
T ss_pred EEEECCCCCEEEEEe--cCCeEEEEEECCcccceeeeEeecccCCCeEEEEEcCCCCEEEEEeCCCEEEEEEEEec
Confidence 2222 2566555554 357899999988 55766666664 22223445555667665554 4778999998643
No 92
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=75.03 E-value=11 Score=33.16 Aligned_cols=115 Identities=9% Similarity=0.019 Sum_probs=57.7
Q ss_pred eeeeEEEeecCceEEEEeCCCccccc-CCCCCcCCCCcccceeeeeeeeecCCCCCeEEEEEEEEeecccccccCcceEE
Q 045569 107 YNGIFCIFGNNNRITLWNRATKESRV-LPKCTTVFPKYTSIFCKCTGFGLDPMSTDYKLVLIFTLWNEKLDLLYEFSHVA 185 (362)
Q Consensus 107 ~~GLl~~~~~~~~~~V~NP~T~~~~~-LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~e 185 (362)
.+|+|++.+.++.++-.|..|++.+. +..... .. .++.........-.++.+. ...+ -.+.
T Consensus 9 ~~~~V~v~t~dG~l~Ald~~tG~~~W~~~~~~~-~p--------~~~~~~~~~~~~~~~~vv~-p~~d--------G~l~ 70 (339)
T 2be1_A 9 LSDILIAADVEGGLHAVDRRNGHIIWSIEPENF-QP--------LIEIQEPSRLETYETLIIE-PFGD--------GNIY 70 (339)
T ss_dssp EEEEEEEEETTSCEEEEETTTTEEEEEECGGGS-CC--------SEECCCSCTTTSSEEEEEC-CSTT--------TEEE
T ss_pred eCCEEEEEeCCCeEEEEECCCCcEEEEecCCcc-CC--------cEEecCCccccCCcEEEEE-ECCC--------CEEE
Confidence 46788888777779999999987443 111100 00 0111000111112233321 0111 2477
Q ss_pred EEECCCCCceecccCCC---ccccccCCcceEE-------ECceEEEEeeccCCCccEEEEEEcCCceee
Q 045569 186 VYSLSTNSWRYCDCFKS---NHYYMDGAFDSVY-------LDGVCYWLSEFRDNDHKVILSFHLGNEVFE 245 (362)
Q Consensus 186 Vyss~~~~W~~~~~~~~---~~~~~~~~~~~v~-------~~G~lywl~~~~~~~~~~il~fD~~~e~~~ 245 (362)
.|+..+|.|+---..+. .-|. .+...+|. .+|.+|.-...+ .+.++|..+++-.
T Consensus 71 a~~~~~G~~~~~~~~~~lv~~SP~-~~~~~pvv~~~~~~~~~g~Vy~Gs~~g-----~l~ald~~tG~~~ 134 (339)
T 2be1_A 71 YFNAHQGLQKLPLSIRQLVSTSPL-HLKTNIVVNDSGKIVEDEKVYTGSMRT-----IMYTINMLNGEII 134 (339)
T ss_dssp EEETTTEEEEEEEEHHHHHTTCSE-EEECC----------CCEEEEECEEEE-----EEEEEETTTCCEE
T ss_pred EEECCCCcEEeeeccccceecccc-ccCCCceeecccccccCCEEEEEecCC-----EEEEEECCCCcEE
Confidence 77777776552111110 0011 11244455 899999988776 8999999876543
No 93
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=74.73 E-value=39 Score=28.73 Aligned_cols=63 Identities=10% Similarity=0.128 Sum_probs=37.1
Q ss_pred CeEEEEEEcCCCCeEEEEEeeC-C-eeEEEEEeCCC--CCceeeEEEeeCCcEEEEe-cCCeEEEEeCCC
Q 045569 265 HSLCLLLSHNIENYYDIWVMKY-K-CWIKQLSLGPL--NGVRTPLGFWKKGAFFVHS-TNEQLLLYDPNT 329 (362)
Q Consensus 265 g~L~l~~~~~~~~~~~IW~l~~-~-~W~~~~~i~~~--~~~~~~~~~~~~g~il~~~-~~~~~~~yd~~~ 329 (362)
|++.+++. ....+.||-++. . .......+... ......+.+..++..++.. .++.+..||+.+
T Consensus 299 ~~~l~~~~--~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~ 366 (366)
T 3k26_A 299 QKMLALGN--QVGKLYVWDLEVEDPHKAKCTTLTHHKCGAAIRQTSFSRDSSILIAVCDDASIWRWDRLR 366 (366)
T ss_dssp SSEEEEEC--TTSCEEEEECCSSSGGGCEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSEEEEEEC--
T ss_pred CcEEEEEe--cCCcEEEEECCCCCCccccceEEcccccCCceEEEEeCCCCCeEEEEeCCCEEEEEEecC
Confidence 66655554 467899999987 2 22234444432 1223344555677776654 477899999864
No 94
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=74.66 E-value=39 Score=28.71 Aligned_cols=189 Identities=7% Similarity=0.031 Sum_probs=87.0
Q ss_pred ee-eEEEeecCceEEEEeCCCcccccCCCCCcCCCCcccceeeeeeeeecCCCCCeEEEEEEEEeecccccccCcceEEE
Q 045569 108 NG-IFCIFGNNNRITLWNRATKESRVLPKCTTVFPKYTSIFCKCTGFGLDPMSTDYKLVLIFTLWNEKLDLLYEFSHVAV 186 (362)
Q Consensus 108 ~G-Ll~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~eV 186 (362)
+| +|+..+.++.+.|||..+++...+.... .. ...+.+.+..+.-.++... . ...+.+
T Consensus 97 ~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~----~~------v~~~~~~~~~~~~~l~~~~---~--------dg~i~v 155 (368)
T 3mmy_A 97 DGSKVFTASCDKTAKMWDLSSNQAIQIAQHD----AP------VKTIHWIKAPNYSCVMTGS---W--------DKTLKF 155 (368)
T ss_dssp TSSEEEEEETTSEEEEEETTTTEEEEEEECS----SC------EEEEEEEECSSCEEEEEEE---T--------TSEEEE
T ss_pred CCCEEEEEcCCCcEEEEEcCCCCceeecccc----Cc------eEEEEEEeCCCCCEEEEcc---C--------CCcEEE
Confidence 44 3444466667999999988866543211 11 3455552222222233221 1 135888
Q ss_pred EECCCCCcee-cccCCCccccccCCcceEEECceEEEEeeccCCCccEEEEEEcCCcee--eeecCCCCCCCCCcEEEE-
Q 045569 187 YSLSTNSWRY-CDCFKSNHYYMDGAFDSVYLDGVCYWLSEFRDNDHKVILSFHLGNEVF--EEIQEPYIPESTPTILGI- 262 (362)
Q Consensus 187 yss~~~~W~~-~~~~~~~~~~~~~~~~~v~~~G~lywl~~~~~~~~~~il~fD~~~e~~--~~i~~P~~~~~~~~~l~~- 262 (362)
|+.+++.-.. .... .. ...+...+........ ...+..+|+....- ..+..+..... ..+..
T Consensus 156 wd~~~~~~~~~~~~~---~~-----~~~~~~~~~~~~~~~~----~~~i~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~ 221 (368)
T 3mmy_A 156 WDTRSSNPMMVLQLP---ER-----CYCADVIYPMAVVATA----ERGLIVYQLENQPSEFRRIESPLKHQH--RCVAIF 221 (368)
T ss_dssp ECSSCSSCSEEEECS---SC-----EEEEEEETTEEEEEEG----GGCEEEEECSSSCEEEEECCCSCSSCE--EEEEEE
T ss_pred EECCCCcEEEEEecC---CC-----ceEEEecCCeeEEEeC----CCcEEEEEeccccchhhhccccccCCC--ceEEEc
Confidence 8887753211 1110 01 1112222222233322 23678888776533 33333322211 11221
Q ss_pred ECC----eEEEEEEcCCCCeEEEEEeeCC-eeEEEEEeCCCCC------------ceeeEEEeeCCcEEEEe-cCCeEEE
Q 045569 263 YNH----SLCLLLSHNIENYYDIWVMKYK-CWIKQLSLGPLNG------------VRTPLGFWKKGAFFVHS-TNEQLLL 324 (362)
Q Consensus 263 ~~g----~L~l~~~~~~~~~~~IW~l~~~-~W~~~~~i~~~~~------------~~~~~~~~~~g~il~~~-~~~~~~~ 324 (362)
..+ ...+++. ....+.||.++.. .-.....+..... ....+.+..++.+++.. .++.+.+
T Consensus 222 ~~~~~~~~~~~~~~--~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~i~i 299 (368)
T 3mmy_A 222 KDKQNKPTGFALGS--IEGRVAIHYINPPNPAKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSF 299 (368)
T ss_dssp ECTTSCEEEEEEEE--TTSEEEEEESSCSCHHHHSEEEECSEEC----CCCEEECCEEEEEECTTTCCEEEEETTSCEEE
T ss_pred ccCCCCCCeEEEec--CCCcEEEEecCCCCccccceeeeeeecccccccccccccceEEEEEecCCCEEEEEccCCeEEE
Confidence 111 1123333 4679999999762 1011111111000 12233444566655544 4788999
Q ss_pred EeCCCCcEE
Q 045569 325 YDPNTQEMR 333 (362)
Q Consensus 325 yd~~~~~~~ 333 (362)
||.++++..
T Consensus 300 wd~~~~~~~ 308 (368)
T 3mmy_A 300 WDKDARTKL 308 (368)
T ss_dssp EETTTTEEE
T ss_pred EECCCCcEE
Confidence 999987643
No 95
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=74.48 E-value=45 Score=29.54 Aligned_cols=87 Identities=13% Similarity=0.175 Sum_probs=53.1
Q ss_pred eeeecCCCCCCCCCcEEEEE-CCeEEEEEEcCCCCeEEEEEeeCCeeEEEEEeCCCCCceeeEEEeeCCcEEEEe-cCCe
Q 045569 244 FEEIQEPYIPESTPTILGIY-NHSLCLLLSHNIENYYDIWVMKYKCWIKQLSLGPLNGVRTPLGFWKKGAFFVHS-TNEQ 321 (362)
Q Consensus 244 ~~~i~~P~~~~~~~~~l~~~-~g~L~l~~~~~~~~~~~IW~l~~~~W~~~~~i~~~~~~~~~~~~~~~g~il~~~-~~~~ 321 (362)
++.+..|.-..+.+..+... .+.+..++. ...+.||-.+.+.-.+...+.........+++..+|..++.. .++.
T Consensus 94 ~~~l~ap~~~~d~y~~~l~wS~~n~lAvgl---d~tV~lWd~~tg~~~~~~~~~~~~~~V~sv~fspdg~~lasgs~Dg~ 170 (420)
T 4gga_A 94 DRILDAPEIRNDYYLNLVDWSSGNVLAVAL---DNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAE 170 (420)
T ss_dssp SEEEECTTCCCCTTCBCEEECTTSEEEEEE---TTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSC
T ss_pred ceEEECCCCcccccceeEEECCCCEEEEEe---CCEEEEEECCCCCEEEEEEecCCCCcEEEEEECCCCCEEEEEECCCe
Confidence 34556776665544444443 233322333 479999998776555555554322223456666777776654 4788
Q ss_pred EEEEeCCCCcEE
Q 045569 322 LLLYDPNTQEMR 333 (362)
Q Consensus 322 ~~~yd~~~~~~~ 333 (362)
+.+||.++++..
T Consensus 171 v~iWd~~~~~~~ 182 (420)
T 4gga_A 171 VQLWDVQQQKRL 182 (420)
T ss_dssp EEEEETTTTEEE
T ss_pred EEEEEcCCCcEE
Confidence 999999987654
No 96
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=73.41 E-value=42 Score=28.52 Aligned_cols=53 Identities=13% Similarity=-0.011 Sum_probs=34.1
Q ss_pred cEEEEEEcCCceeeeecCCCCCCCCC-cEEEEECCeEEEEEEcCCCCeEEEEEeeC
Q 045569 232 KVILSFHLGNEVFEEIQEPYIPESTP-TILGIYNHSLCLLLSHNIENYYDIWVMKY 286 (362)
Q Consensus 232 ~~il~fD~~~e~~~~i~~P~~~~~~~-~~l~~~~g~L~l~~~~~~~~~~~IW~l~~ 286 (362)
..|..||...+....+..|....... ..+...+|.|++... ....+.+..++.
T Consensus 260 ~~v~~~d~~G~~~~~~~~~~g~~~~~~~~~~~~~g~L~v~~~--~~~~i~~~~~~~ 313 (322)
T 2fp8_A 260 PKGIKFDEFGNILEVIPLPPPFAGEHFEQIQEHDGLLYIGTL--FHGSVGILVYDK 313 (322)
T ss_dssp EEEEEECTTSCEEEEEECCTTTTTSCCCEEEEETTEEEEECS--SCSEEEEEEC--
T ss_pred cEEEEECCCCCEEEEEECCCCCccccceEEEEeCCEEEEeec--CCCceEEEeccc
Confidence 46999999888888888876431111 345567888887654 345666666543
No 97
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=72.97 E-value=38 Score=31.95 Aligned_cols=113 Identities=11% Similarity=0.059 Sum_probs=61.3
Q ss_pred cceEEECceEEEEee-ccCCCccEEEEEEc-CC--ceeeeecCCCCC--------CCCCcEEEEECCeEEEEEEcCCCCe
Q 045569 211 FDSVYLDGVCYWLSE-FRDNDHKVILSFHL-GN--EVFEEIQEPYIP--------ESTPTILGIYNHSLCLLLSHNIENY 278 (362)
Q Consensus 211 ~~~v~~~G~lywl~~-~~~~~~~~il~fD~-~~--e~~~~i~~P~~~--------~~~~~~l~~~~g~L~l~~~~~~~~~ 278 (362)
..++..+|.+|.... .+ .+.++|. .+ +.|+. .++... ......++..+|++++... ...
T Consensus 56 ~~P~v~~g~vyv~~~~~~-----~v~AlD~~~tG~~~W~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~---dg~ 126 (571)
T 2ad6_A 56 GAPLVIGDMMYVHSAFPN-----NTYALNLNDPGKIVWQH-KPKQDASTKAVMCCDVVDRGLAYGAGQIVKKQA---NGH 126 (571)
T ss_dssp SCCEEETTEEEEECSTTT-----CEEEEETTCTTSEEEEE-CCCCCGGGGGGCTTCSCCCCCEEETTEEEEECT---TSE
T ss_pred cccEEECCEEEEEeCCCC-----EEEEEeCCCCccEEEEE-cCCCCccccccccccccccccEEECCEEEEEeC---CCE
Confidence 566889999999876 33 6999998 54 45553 222210 0000224456777765542 223
Q ss_pred EEEEEeeC--CeeEEEEEeCCC--CCceeeEEEeeCCcEEEEec------CCeEEEEeCCCCcEEE
Q 045569 279 YDIWVMKY--KCWIKQLSLGPL--NGVRTPLGFWKKGAFFVHST------NEQLLLYDPNTQEMRD 334 (362)
Q Consensus 279 ~~IW~l~~--~~W~~~~~i~~~--~~~~~~~~~~~~g~il~~~~------~~~~~~yd~~~~~~~~ 334 (362)
+...-.+. ..|.....-... .....|+. .++.+++... ++.++.||.+|++..+
T Consensus 127 l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v--~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W 190 (571)
T 2ad6_A 127 LLALDAKTGKINWEVEVCDPKVGSTLTQAPFV--AKDTVLMGCSGAELGVRGAVNAFDLKTGELKW 190 (571)
T ss_dssp EEEEETTTCCEEEEEECCCGGGTCBCCSCCEE--ETTEEEEECBCGGGTCCCEEEEEETTTCCEEE
T ss_pred EEEEECCCCCEEEEecCCCCCccceeccCCEE--ECCEEEEEecCCccCCCCEEEEEECCCCcEEE
Confidence 33322222 457643211000 01123432 3567776554 5789999999988654
No 98
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=72.38 E-value=75 Score=30.98 Aligned_cols=97 Identities=10% Similarity=0.089 Sum_probs=58.6
Q ss_pred cEEEEEEcCCceeeeec-CCCCCCCCCcEEEEE-C--CeEEEEEEcCCCCeEEEEEeeCCeeEEEEEeCCCCCceeeEEE
Q 045569 232 KVILSFHLGNEVFEEIQ-EPYIPESTPTILGIY-N--HSLCLLLSHNIENYYDIWVMKYKCWIKQLSLGPLNGVRTPLGF 307 (362)
Q Consensus 232 ~~il~fD~~~e~~~~i~-~P~~~~~~~~~l~~~-~--g~L~l~~~~~~~~~~~IW~l~~~~W~~~~~i~~~~~~~~~~~~ 307 (362)
..|..+|+.+++...+. +.... ..-..+... + |.+.+.+. ....+.||-++...|.....+.........+.+
T Consensus 31 g~I~vwd~~~~~~~~~~~l~~h~-~~V~~l~~s~~~~~~~l~s~s--~Dg~I~vwd~~~~~~~~~~~~~~h~~~V~~v~~ 107 (753)
T 3jro_A 31 KTIKIFEVEGETHKLIDTLTGHE-GPVWRVDWAHPKFGTILASCS--YDGKVLIWKEENGRWSQIAVHAVHSASVNSVQW 107 (753)
T ss_dssp TEEEEEEEETTEEEEEEEECCCS-SCEEEEEECCTTSCSEEEEEE--TTSCEEEEEEETTEEEEEEEECCCSSCEEEEEE
T ss_pred CcEEEEecCCCCCccceeccCCc-CceEEEEecCCCCCCEEEEEe--CCCeEEEEECCCCcccccccccCCCCCeEEEEE
Confidence 36778887765555432 22221 111233332 2 66655555 467899999999888777777643333344445
Q ss_pred eeC--CcEEEEe-cCCeEEEEeCCCCc
Q 045569 308 WKK--GAFFVHS-TNEQLLLYDPNTQE 331 (362)
Q Consensus 308 ~~~--g~il~~~-~~~~~~~yd~~~~~ 331 (362)
..+ +.+++.. .++.+..||++++.
T Consensus 108 sp~~~~~~l~sgs~dg~I~vwdl~~~~ 134 (753)
T 3jro_A 108 APHEYGPLLLVASSDGKVSVVEFKENG 134 (753)
T ss_dssp CCGGGCSEEEEEETTSEEEEEECCSSS
T ss_pred CCCCCCCEEEEEeCCCcEEEEEeecCC
Confidence 555 6665554 57889999998874
No 99
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=72.28 E-value=49 Score=28.78 Aligned_cols=186 Identities=8% Similarity=-0.075 Sum_probs=91.8
Q ss_pred eeeeeEEEeecCceEEEEeCCCcccccCCCCCcCCCCcccceeeeeeeeecCCCCCeEEEEEEEEeecccccccCcceEE
Q 045569 106 PYNGIFCIFGNNNRITLWNRATKESRVLPKCTTVFPKYTSIFCKCTGFGLDPMSTDYKLVLIFTLWNEKLDLLYEFSHVA 185 (362)
Q Consensus 106 s~~GLl~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~e 185 (362)
+.+|.++..+..+.+.++|..+++....-.. ... ....+.+.+..+ + ++... . ...+.
T Consensus 215 ~~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~----~~~-----~i~~~~~~~~~~-~-l~~~~---~--------d~~i~ 272 (425)
T 1r5m_A 215 VDDDKFVIPGPKGAIFVYQITEKTPTGKLIG----HHG-----PISVLEFNDTNK-L-LLSAS---D--------DGTLR 272 (425)
T ss_dssp EETTEEEEECGGGCEEEEETTCSSCSEEECC----CSS-----CEEEEEEETTTT-E-EEEEE---T--------TSCEE
T ss_pred cCCCEEEEEcCCCeEEEEEcCCCceeeeecc----CCC-----ceEEEEECCCCC-E-EEEEc---C--------CCEEE
Confidence 4467766666666799999988754322111 111 145666666433 2 22221 1 12588
Q ss_pred EEECCCCCcee-cccCCCccccccCCcceEEECceEEEEeeccCCCccEEEEEEcCCceeee-ecCCCCCCCCCcEEEE-
Q 045569 186 VYSLSTNSWRY-CDCFKSNHYYMDGAFDSVYLDGVCYWLSEFRDNDHKVILSFHLGNEVFEE-IQEPYIPESTPTILGI- 262 (362)
Q Consensus 186 Vyss~~~~W~~-~~~~~~~~~~~~~~~~~v~~~G~lywl~~~~~~~~~~il~fD~~~e~~~~-i~~P~~~~~~~~~l~~- 262 (362)
+|+.+++.-.. ..... ... ..-...-+| +.+.... ...|..+|+.+.+... +..... ....+..
T Consensus 273 i~d~~~~~~~~~~~~~~--~~i---~~~~~~~~~--~l~~~~~---d~~i~i~d~~~~~~~~~~~~~~~---~i~~~~~s 339 (425)
T 1r5m_A 273 IWHGGNGNSQNCFYGHS--QSI---VSASWVGDD--KVISCSM---DGSVRLWSLKQNTLLALSIVDGV---PIFAGRIS 339 (425)
T ss_dssp EECSSSBSCSEEECCCS--SCE---EEEEEETTT--EEEEEET---TSEEEEEETTTTEEEEEEECTTC---CEEEEEEC
T ss_pred EEECCCCccceEecCCC--ccE---EEEEECCCC--EEEEEeC---CCcEEEEECCCCcEeEecccCCc---cEEEEEEc
Confidence 88877653221 11110 110 011112245 3333222 3479999997765432 332111 1022322
Q ss_pred ECCeEEEEEEcCCCCeEEEEEeeCCe------------------eEEEEEeCCCCC--ceeeEEEeeCCcEEEE-ecCCe
Q 045569 263 YNHSLCLLLSHNIENYYDIWVMKYKC------------------WIKQLSLGPLNG--VRTPLGFWKKGAFFVH-STNEQ 321 (362)
Q Consensus 263 ~~g~L~l~~~~~~~~~~~IW~l~~~~------------------W~~~~~i~~~~~--~~~~~~~~~~g~il~~-~~~~~ 321 (362)
.+|.+.+++. ....+.||.++... +.....+..... ....+.+..++..++. ..++.
T Consensus 340 ~~~~~l~~~~--~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~ 417 (425)
T 1r5m_A 340 QDGQKYAVAF--MDGQVNVYDLKKLNSKSRSLYGNRDGILNPLPIPLYASYQSSQDNDYIFDLSWNCAGNKISVAYSLQE 417 (425)
T ss_dssp TTSSEEEEEE--TTSCEEEEECHHHHC--------------CEECCEEEEECCTTCCCCEEEEEECTTSSEEEEEESSSC
T ss_pred CCCCEEEEEE--CCCeEEEEECCCCccceeeeecccccccCcccchhhhhhcCcccCCceEEEEccCCCceEEEEecCce
Confidence 2466555554 35789999987611 113444443211 2334455556665544 44777
Q ss_pred EEEEeCC
Q 045569 322 LLLYDPN 328 (362)
Q Consensus 322 ~~~yd~~ 328 (362)
+..||++
T Consensus 418 i~iw~~~ 424 (425)
T 1r5m_A 418 GSVVAIP 424 (425)
T ss_dssp CEEEECC
T ss_pred EEEEeec
Confidence 9999876
No 100
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=72.25 E-value=41 Score=27.86 Aligned_cols=137 Identities=13% Similarity=0.040 Sum_probs=80.9
Q ss_pred ceEEEEECCCCCce-ecccCCCccccccCCcceEEECceEEEEeeccCCCccEEEEEEcCCcee-eeecCCCCCCCCCcE
Q 045569 182 SHVAVYSLSTNSWR-YCDCFKSNHYYMDGAFDSVYLDGVCYWLSEFRDNDHKVILSFHLGNEVF-EEIQEPYIPESTPTI 259 (362)
Q Consensus 182 ~~~eVyss~~~~W~-~~~~~~~~~~~~~~~~~~v~~~G~lywl~~~~~~~~~~il~fD~~~e~~-~~i~~P~~~~~~~~~ 259 (362)
..+.+++..++.=. .+......+. ..-...++.+|-+.... ..+..||..+.+- ..++.|.. . .-
T Consensus 43 S~v~~vD~~tgkv~~~~~l~~~~fg-----eGi~~~~~~ly~ltw~~----~~v~v~D~~tl~~~~ti~~~~~---G-wg 109 (243)
T 3mbr_X 43 SSVRKVDLETGRILQRAEVPPPYFG-----AGIVAWRDRLIQLTWRN----HEGFVYDLATLTPRARFRYPGE---G-WA 109 (243)
T ss_dssp CEEEEEETTTCCEEEEEECCTTCCE-----EEEEEETTEEEEEESSS----SEEEEEETTTTEEEEEEECSSC---C-CE
T ss_pred ceEEEEECCCCCEEEEEeCCCCcce-----eEEEEeCCEEEEEEeeC----CEEEEEECCcCcEEEEEeCCCC---c-eE
Confidence 46889999987433 2222111111 22355678999998653 4899999987554 56777642 2 45
Q ss_pred EEEECCeEEEEEEcCCCCeEEEEEeeCCeeEEEEEeCCCC-C--cee--eEEEeeCCcEEEEe-cCCeEEEEeCCCCcEE
Q 045569 260 LGIYNHSLCLLLSHNIENYYDIWVMKYKCWIKQLSLGPLN-G--VRT--PLGFWKKGAFFVHS-TNEQLLLYDPNTQEMR 333 (362)
Q Consensus 260 l~~~~g~L~l~~~~~~~~~~~IW~l~~~~W~~~~~i~~~~-~--~~~--~~~~~~~g~il~~~-~~~~~~~yd~~~~~~~ 333 (362)
|+.-+++|++... .. .|++++-..=..+.+|.... . +.. -+. +.+|+|+... ..+.+..-|+++++..
T Consensus 110 lt~dg~~L~vSdg---s~--~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe-~~~G~lyanvw~s~~I~vIDp~tG~V~ 183 (243)
T 3mbr_X 110 LTSDDSHLYMSDG---TA--VIRKLDPDTLQQVGSIKVTAGGRPLDNLNELE-WVNGELLANVWLTSRIARIDPASGKVV 183 (243)
T ss_dssp EEECSSCEEEECS---SS--EEEEECTTTCCEEEEEECEETTEECCCEEEEE-EETTEEEEEETTTTEEEEECTTTCBEE
T ss_pred EeeCCCEEEEECC---CC--eEEEEeCCCCeEEEEEEEccCCcccccceeeE-EeCCEEEEEECCCCeEEEEECCCCCEE
Confidence 6666677776542 23 47777763333444554311 1 111 122 2378887654 3678999999998874
Q ss_pred -EeeE
Q 045569 334 -DLGR 337 (362)
Q Consensus 334 -~v~~ 337 (362)
.+..
T Consensus 184 ~~idl 188 (243)
T 3mbr_X 184 AWIDL 188 (243)
T ss_dssp EEEEC
T ss_pred EEEEC
Confidence 4553
No 101
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=71.61 E-value=47 Score=28.34 Aligned_cols=96 Identities=10% Similarity=0.078 Sum_probs=57.2
Q ss_pred EEEEEEcCCceeeeec-CCCCCCCCCcEEEEE-C--CeEEEEEEcCCCCeEEEEEeeCCeeEEEEEeCCCCCceeeEEEe
Q 045569 233 VILSFHLGNEVFEEIQ-EPYIPESTPTILGIY-N--HSLCLLLSHNIENYYDIWVMKYKCWIKQLSLGPLNGVRTPLGFW 308 (362)
Q Consensus 233 ~il~fD~~~e~~~~i~-~P~~~~~~~~~l~~~-~--g~L~l~~~~~~~~~~~IW~l~~~~W~~~~~i~~~~~~~~~~~~~ 308 (362)
.|..+|+..++...+. +..... .-..+... + |.+.+.+. ....+.||.++...|.....+.........+.+.
T Consensus 34 ~i~iw~~~~~~~~~~~~~~~h~~-~v~~~~~~~~~~~~~l~s~~--~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~ 110 (379)
T 3jrp_A 34 TIKIFEVEGETHKLIDTLTGHEG-PVWRVDWAHPKFGTILASCS--YDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWA 110 (379)
T ss_dssp CEEEEEEETTEEEEEEEECCCSS-CEEEEEECCGGGCSEEEEEE--TTSCEEEEEEETTEEEEEEEECCCSSCEEEEEEC
T ss_pred cEEEEecCCCcceeeeEecCCCC-cEEEEEeCCCCCCCEEEEec--cCCEEEEEEcCCCceeEeeeecCCCcceEEEEeC
Confidence 5777777655554432 221111 10233332 2 56655555 3578999999998888877776433333444555
Q ss_pred eC--CcEEEE-ecCCeEEEEeCCCCc
Q 045569 309 KK--GAFFVH-STNEQLLLYDPNTQE 331 (362)
Q Consensus 309 ~~--g~il~~-~~~~~~~~yd~~~~~ 331 (362)
.+ +.+++. ..++.+..||++++.
T Consensus 111 ~~~~~~~l~~~~~d~~i~v~d~~~~~ 136 (379)
T 3jrp_A 111 PHEYGPLLLVASSDGKVSVVEFKENG 136 (379)
T ss_dssp CGGGCSEEEEEETTSEEEEEECCTTS
T ss_pred CCCCCCEEEEecCCCcEEEEecCCCC
Confidence 55 555554 457889999998874
No 102
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=71.04 E-value=55 Score=28.92 Aligned_cols=186 Identities=7% Similarity=-0.061 Sum_probs=93.1
Q ss_pred eeeEEEeecCceEEEEeCCCcccccCCCCCcCCCCcccceeeeeeeeecCCCCCeEEEEEEEEeecccccccCcceEEEE
Q 045569 108 NGIFCIFGNNNRITLWNRATKESRVLPKCTTVFPKYTSIFCKCTGFGLDPMSTDYKLVLIFTLWNEKLDLLYEFSHVAVY 187 (362)
Q Consensus 108 ~GLl~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~eVy 187 (362)
.+.|++.... .+...++.+++...+-.. ... ..|+.+|+..+...+.-+ . ...+..+
T Consensus 87 ~~~l~~~~~~-~I~~i~~~~~~~~~~~~~----~~~------~~gl~~d~~~~~ly~~D~----~--------~~~I~r~ 143 (386)
T 3v65_B 87 EPVLLFANRI-DIRQVLPHRSEYTLLLNN----LEN------AIALDFHHRRELVFWSDV----T--------LDRILRA 143 (386)
T ss_dssp CCEEEEECBS-CEEEECTTSCCCEEEECS----CSC------EEEEEEETTTTEEEEEET----T--------TTEEEEE
T ss_pred cceeEeecCc-cceeeccCCCcEEEEecC----CCc------cEEEEEecCCCeEEEEeC----C--------CCcEEEE
Confidence 4555555332 367777766554333211 112 678888876553322211 1 1356777
Q ss_pred ECCCCCceecccCCCccccccCCcceEEE---CceEEEEeeccCCCccEEEEEEcCCceeeeecCCCCCCCCCcEEEEE-
Q 045569 188 SLSTNSWRYCDCFKSNHYYMDGAFDSVYL---DGVCYWLSEFRDNDHKVILSFHLGNEVFEEIQEPYIPESTPTILGIY- 263 (362)
Q Consensus 188 ss~~~~W~~~~~~~~~~~~~~~~~~~v~~---~G~lywl~~~~~~~~~~il~fD~~~e~~~~i~~P~~~~~~~~~l~~~- 263 (362)
+..++..+.+.... ... ..++.+ +|.+||..... ..|.++|+....-..+. ..... ....++.-
T Consensus 144 ~~~g~~~~~~~~~~--~~~----p~glavd~~~g~lY~~d~~~----~~I~~~~~dg~~~~~l~-~~~l~-~P~giavdp 211 (386)
T 3v65_B 144 NLNGSNVEEVVSTG--LES----PGGLAVDWVHDKLYWTDSGT----SRIEVANLDGAHRKVLL-WQSLE-KPRAIALHP 211 (386)
T ss_dssp ETTSCCEEEEECSS--CSC----CCCEEEETTTTEEEEEETTT----TEEEECBTTSCSCEEEE-CSSCS-CEEEEEEET
T ss_pred ecCCCCcEEEEeCC--CCC----ccEEEEEeCCCeEEEEcCCC----CeEEEEeCCCCceEEee-cCCCC-CCcEEEEEc
Confidence 77766544432111 111 233333 68999997653 47999998765433321 11111 11334443
Q ss_pred -CCeEEEEEEcCCCCeEEEEEeeC-CeeEEEEEeCCCCCceee--EEEe-eCCcEEEEec-CCeEEEEeCCCCcEEE
Q 045569 264 -NHSLCLLLSHNIENYYDIWVMKY-KCWIKQLSLGPLNGVRTP--LGFW-KKGAFFVHST-NEQLLLYDPNTQEMRD 334 (362)
Q Consensus 264 -~g~L~l~~~~~~~~~~~IW~l~~-~~W~~~~~i~~~~~~~~~--~~~~-~~g~il~~~~-~~~~~~yd~~~~~~~~ 334 (362)
+|.|++.... ... .|++.+- ++-.+. .+. ..+..| +++. .++.||+... ...+..+|++....+.
T Consensus 212 ~~g~ly~td~~-~~~--~I~r~~~dG~~~~~-~~~--~~~~~PnGlavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~ 282 (386)
T 3v65_B 212 MEGTIYWTDWG-NTP--RIEASSMDGSGRRI-IAD--THLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKA 282 (386)
T ss_dssp TTTEEEEEECS-SSC--EEEEEETTSCSCEE-EEC--SSCSCEEEEEEEGGGTEEEEEETTTTEEEEECTTSCSCEE
T ss_pred CCCeEEEeccC-CCC--EEEEEeCCCCCcEE-EEE--CCCCCeeeEEEeCCCCEEEEEECCCCEEEEEeCCCCeeEE
Confidence 6778776542 113 4555543 221111 111 122334 4444 3567777654 5678899987655443
No 103
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=71.02 E-value=55 Score=28.83 Aligned_cols=70 Identities=11% Similarity=0.081 Sum_probs=45.0
Q ss_pred CCeEEEEEEcCC-----CCeEEEEEeeCCeeEEEEEeCCCCCceeeEEEeeCCc-EEEEec--CCeEEEEeCCCCcEEE
Q 045569 264 NHSLCLLLSHNI-----ENYYDIWVMKYKCWIKQLSLGPLNGVRTPLGFWKKGA-FFVHST--NEQLLLYDPNTQEMRD 334 (362)
Q Consensus 264 ~g~L~l~~~~~~-----~~~~~IW~l~~~~W~~~~~i~~~~~~~~~~~~~~~g~-il~~~~--~~~~~~yd~~~~~~~~ 334 (362)
+++|++...... ...=+||+.+-.....+.+|+... ....+.+..+|+ +++..+ ++.+.+||.++++...
T Consensus 278 ~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~~vv~~i~~g~-~p~~i~~s~Dg~~~l~v~~~~~~~V~ViD~~t~~vv~ 355 (373)
T 2mad_H 278 SDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQTSSQISLGH-DVDAISVAQDGGPDLYALSAGTEVLHIYDAGAGDQDQ 355 (373)
T ss_pred CCEEEEEeccCCcccccCCCCeEEEEECCCCEEEEEEECCC-CcCeEEECCCCCeEEEEEcCCCCeEEEEECCCCCEEe
Confidence 355666554211 112368988887777878886432 234556667777 655543 6789999999987654
No 104
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=70.91 E-value=54 Score=28.70 Aligned_cols=201 Identities=11% Similarity=0.002 Sum_probs=99.1
Q ss_pred ee-eEEEeecCceEEEEeCCCcccccCC-CC--CcCCCCcccceeeeeeeeecCCCCCeEEEEEEEEeecccccccCcce
Q 045569 108 NG-IFCIFGNNNRITLWNRATKESRVLP-KC--TTVFPKYTSIFCKCTGFGLDPMSTDYKLVLIFTLWNEKLDLLYEFSH 183 (362)
Q Consensus 108 ~G-Ll~~~~~~~~~~V~NP~T~~~~~LP-~~--~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~~~ 183 (362)
+| +|+..+.++.+.|||..+++...-. .+ ....+. .....+.+.|....+ ++... . ...
T Consensus 93 ~~~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~h~-----~~v~~~~~~p~~~~~-l~s~~----~-------dg~ 155 (402)
T 2aq5_A 93 NDNVIASGSEDCTVMVWEIPDGGLVLPLREPVITLEGHT-----KRVGIVAWHPTAQNV-LLSAG----C-------DNV 155 (402)
T ss_dssp CTTEEEEEETTSEEEEEECCTTCCSSCBCSCSEEEECCS-----SCEEEEEECSSBTTE-EEEEE----T-------TSC
T ss_pred CCCEEEEEeCCCeEEEEEccCCCCccccCCceEEecCCC-----CeEEEEEECcCCCCE-EEEEc----C-------CCE
Confidence 44 4444466777999998887542210 01 010111 114566666654333 22221 1 125
Q ss_pred EEEEECCCCCceecccCCCccccccCCcceEEE--CceEEEEeeccCCCccEEEEEEcCCceeee-e-cCCCCCCCCCcE
Q 045569 184 VAVYSLSTNSWRYCDCFKSNHYYMDGAFDSVYL--DGVCYWLSEFRDNDHKVILSFHLGNEVFEE-I-QEPYIPESTPTI 259 (362)
Q Consensus 184 ~eVyss~~~~W~~~~~~~~~~~~~~~~~~~v~~--~G~lywl~~~~~~~~~~il~fD~~~e~~~~-i-~~P~~~~~~~~~ 259 (362)
+.|++.+++.....-.....-. .-.++.+ +|........ ...|..+|+.+.+... + ...... ....
T Consensus 156 i~iwd~~~~~~~~~~~~~~~~~----~v~~~~~~~~~~~l~~~~~----d~~i~iwd~~~~~~~~~~~~~~~~~--~~~~ 225 (402)
T 2aq5_A 156 ILVWDVGTGAAVLTLGPDVHPD----TIYSVDWSRDGALICTSCR----DKRVRVIEPRKGTVVAEKDRPHEGT--RPVH 225 (402)
T ss_dssp EEEEETTTTEEEEEECTTTCCS----CEEEEEECTTSSCEEEEET----TSEEEEEETTTTEEEEEEECSSCSS--SCCE
T ss_pred EEEEECCCCCccEEEecCCCCC----ceEEEEECCCCCEEEEEec----CCcEEEEeCCCCceeeeeccCCCCC--cceE
Confidence 8899988774432110000000 0122222 4544333332 3479999998765432 3 222111 1122
Q ss_pred EE-EECCeEEEEEEc-CCCCeEEEEEeeC-CeeEEEEEeCCCCCceeeEEEeeCCcEEE-Ee-cCCeEEEEeCCCCc--E
Q 045569 260 LG-IYNHSLCLLLSH-NIENYYDIWVMKY-KCWIKQLSLGPLNGVRTPLGFWKKGAFFV-HS-TNEQLLLYDPNTQE--M 332 (362)
Q Consensus 260 l~-~~~g~L~l~~~~-~~~~~~~IW~l~~-~~W~~~~~i~~~~~~~~~~~~~~~g~il~-~~-~~~~~~~yd~~~~~--~ 332 (362)
+. .-+|++.+++.. .....+.||-++. ..=.....+.....+ ..+.+..++..++ .. .++.+.+||.++++ +
T Consensus 226 ~~~~~~~~~l~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v-~~~~~s~~~~~l~~~g~~dg~i~i~d~~~~~~~~ 304 (402)
T 2aq5_A 226 AVFVSEGKILTTGFSRMSERQVALWDTKHLEEPLSLQELDTSSGV-LLPFFDPDTNIVYLCGKGDSSIRYFEITSEAPFL 304 (402)
T ss_dssp EEECSTTEEEEEEECTTCCEEEEEEETTBCSSCSEEEECCCCSSC-EEEEEETTTTEEEEEETTCSCEEEEEECSSTTCE
T ss_pred EEEcCCCcEEEEeccCCCCceEEEEcCccccCCceEEeccCCCce-eEEEEcCCCCEEEEEEcCCCeEEEEEecCCCcce
Confidence 33 236666555531 2467999999877 321223333332222 2334555676664 44 37789999999877 5
Q ss_pred EEee
Q 045569 333 RDLG 336 (362)
Q Consensus 333 ~~v~ 336 (362)
..+.
T Consensus 305 ~~l~ 308 (402)
T 2aq5_A 305 HYLS 308 (402)
T ss_dssp EEEE
T ss_pred Eeec
Confidence 4443
No 105
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=70.86 E-value=32 Score=33.31 Aligned_cols=114 Identities=13% Similarity=0.124 Sum_probs=62.2
Q ss_pred cceEEECceEEEEeeccCCCccEEEEEEcCCc--eeeee-cCCCC-----C-CCCCcEEEEECCeEEEEEEcCCCCeEEE
Q 045569 211 FDSVYLDGVCYWLSEFRDNDHKVILSFHLGNE--VFEEI-QEPYI-----P-ESTPTILGIYNHSLCLLLSHNIENYYDI 281 (362)
Q Consensus 211 ~~~v~~~G~lywl~~~~~~~~~~il~fD~~~e--~~~~i-~~P~~-----~-~~~~~~l~~~~g~L~l~~~~~~~~~~~I 281 (362)
..++..+|.+|...... .|.++|..+. .|+.- ..+.. . ......++..+|++++... ...+..
T Consensus 71 ~~P~v~~g~vyv~~~~~-----~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~a~~~~~v~v~~~---dg~l~a 142 (677)
T 1kb0_A 71 ATPVVVDGIMYVSASWS-----VVHAIDTRTGNRIWTYDPQIDRSTGFKGCCDVVNRGVALWKGKVYVGAW---DGRLIA 142 (677)
T ss_dssp CCCEEETTEEEEECGGG-----CEEEEETTTTEEEEEECCCCCGGGGGGSSSCSCCCCCEEETTEEEEECT---TSEEEE
T ss_pred eCCEEECCEEEEECCCC-----eEEEEECCCCcEEEEEcCCCCccccccccccCCCCCceEECCEEEEEcC---CCEEEE
Confidence 55688999999987654 6999998764 45432 22110 0 0001234456777766532 234444
Q ss_pred EEeeC--CeeEEEEEeCCC---CCceeeEEEeeCCcEEEEec------CCeEEEEeCCCCcEEE
Q 045569 282 WVMKY--KCWIKQLSLGPL---NGVRTPLGFWKKGAFFVHST------NEQLLLYDPNTQEMRD 334 (362)
Q Consensus 282 W~l~~--~~W~~~~~i~~~---~~~~~~~~~~~~g~il~~~~------~~~~~~yd~~~~~~~~ 334 (362)
+-.+. ..|......+.. .....|+. .++.+++... ++.+..||.+|++..+
T Consensus 143 lD~~tG~~~W~~~~~~~~~~~~~~~~~p~v--~~~~v~v~~~~~~~~~~g~v~a~D~~tG~~~W 204 (677)
T 1kb0_A 143 LDAATGKEVWHQNTFEGQKGSLTITGAPRV--FKGKVIIGNGGAEYGVRGYITAYDAETGERKW 204 (677)
T ss_dssp EETTTCCEEEEEETTTTCCSSCBCCSCCEE--ETTEEEECCBCTTTCCBCEEEEEETTTCCEEE
T ss_pred EECCCCCEEeeecCCcCcCcCcccccCcEE--ECCEEEEEecccccCCCCEEEEEECCCCcEEE
Confidence 44433 457653210110 01123432 3566666543 4679999999988654
No 106
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=70.65 E-value=48 Score=32.12 Aligned_cols=114 Identities=12% Similarity=0.173 Sum_probs=63.2
Q ss_pred cceEEECceEEEEeeccCCCccEEEEEEcCC--ceeeee-cCCCCC------CCCCcEEEEECCeEEEEEEcCCCCeEEE
Q 045569 211 FDSVYLDGVCYWLSEFRDNDHKVILSFHLGN--EVFEEI-QEPYIP------ESTPTILGIYNHSLCLLLSHNIENYYDI 281 (362)
Q Consensus 211 ~~~v~~~G~lywl~~~~~~~~~~il~fD~~~--e~~~~i-~~P~~~------~~~~~~l~~~~g~L~l~~~~~~~~~~~I 281 (362)
..++..+|.+|...... .+.++|..+ +.|+.- ..+... .......+..+|++++... ...+..
T Consensus 64 ~~P~v~~g~vyv~~~~~-----~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~v~~~---dg~l~A 135 (689)
T 1yiq_A 64 ATPIVVDGVMYTTGPFS-----VVYALDARDGRLIWKYDPQSDRHRAGEACCDAVNRGVAVWKGKVYVGVL---DGRLEA 135 (689)
T ss_dssp CCCEEETTEEEEECGGG-----CEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEETTEEEEECT---TSEEEE
T ss_pred ecCEEECCEEEEEcCCC-----eEEEEECCCCceeEEEcCCCCccccccccccCCCCccEEECCEEEEEcc---CCEEEE
Confidence 56688999999987654 699999865 456532 222110 0000223456777765442 234444
Q ss_pred EEeeC--CeeEEEEEeCCCC--C-ceeeEEEeeCCcEEEEec------CCeEEEEeCCCCcEEE
Q 045569 282 WVMKY--KCWIKQLSLGPLN--G-VRTPLGFWKKGAFFVHST------NEQLLLYDPNTQEMRD 334 (362)
Q Consensus 282 W~l~~--~~W~~~~~i~~~~--~-~~~~~~~~~~g~il~~~~------~~~~~~yd~~~~~~~~ 334 (362)
+-.+. ..|......+... . ...|+. .++.+++... ++.++.||.+|++..+
T Consensus 136 lDa~TG~~~W~~~~~~~~~~~~~~~~sP~v--~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W 197 (689)
T 1yiq_A 136 IDAKTGQRAWSVDTRADHKRSYTITGAPRV--VNGKVVIGNGGAEFGVRGYVTAYDAETGKEAW 197 (689)
T ss_dssp EETTTCCEEEEEECCSCTTSCCBCCSCCEE--ETTEEEECCBCTTTCCBCEEEEEETTTCCEEE
T ss_pred EECCCCCEeeeecCcCCCCCCccccCCcEE--ECCEEEEEeCCCccCCCCEEEEEECCCCcEEE
Confidence 44433 5576654212111 1 123432 3566666432 4679999999988654
No 107
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=70.10 E-value=54 Score=28.38 Aligned_cols=188 Identities=10% Similarity=-0.031 Sum_probs=89.0
Q ss_pred eeeeeEEEe-ecCceEEEEeCCCcccccCCCCCcCCCCcccceeeeeeeeecCCCCCeEEEEEEEEeecccccccCcceE
Q 045569 106 PYNGIFCIF-GNNNRITLWNRATKESRVLPKCTTVFPKYTSIFCKCTGFGLDPMSTDYKLVLIFTLWNEKLDLLYEFSHV 184 (362)
Q Consensus 106 s~~GLl~~~-~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~ 184 (362)
+.+|-.++. +....+.|||..+++....-... .. ....+.+.+..+.+-+. .. . ...+
T Consensus 148 spdg~~l~sgs~dg~v~iwd~~~~~~~~~~~~h----~~-----~v~~v~~s~~~~~~~~s-~~----~-------dg~v 206 (357)
T 4g56_B 148 FSDGTQAVSGGKDFSVKVWDLSQKAVLKSYNAH----SS-----EVNCVAACPGKDTIFLS-CG----E-------DGRI 206 (357)
T ss_dssp CSSSSEEEEEETTSCEEEEETTTTEEEEEECCC----SS-----CEEEEEECTTCSSCEEE-EE----T-------TSCE
T ss_pred CCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCC----CC-----CEEEEEEccCCCceeee-ec----c-------CCce
Confidence 445655555 56667999999988754321111 11 13455555544433322 21 1 1247
Q ss_pred EEEECCCCCceecccCCCccccccCCcceEEE---CceEEEEeeccCCCccEEEEEEcCCcee-eeecCCCCCCCCCcEE
Q 045569 185 AVYSLSTNSWRYCDCFKSNHYYMDGAFDSVYL---DGVCYWLSEFRDNDHKVILSFHLGNEVF-EEIQEPYIPESTPTIL 260 (362)
Q Consensus 185 eVyss~~~~W~~~~~~~~~~~~~~~~~~~v~~---~G~lywl~~~~~~~~~~il~fD~~~e~~-~~i~~P~~~~~~~~~l 260 (362)
.+++.+++.-........ .. ....++.+ ++.+...... ...|..+|+.+.+- ..+...... ...+
T Consensus 207 ~~wd~~~~~~~~~~~~~~-~~---~~v~~v~~sp~~~~~la~g~~----d~~i~~wd~~~~~~~~~~~~~~~~---v~~l 275 (357)
T 4g56_B 207 LLWDTRKPKPATRIDFCA-SD---TIPTSVTWHPEKDDTFACGDE----TGNVSLVNIKNPDSAQTSAVHSQN---ITGL 275 (357)
T ss_dssp EECCTTSSSCBCBCCCTT-CC---SCEEEEEECTTSTTEEEEEES----SSCEEEEESSCGGGCEEECCCSSC---EEEE
T ss_pred EEEECCCCceeeeeeecc-cc---ccccchhhhhcccceEEEeec----ccceeEEECCCCcEeEEEecccee---EEEE
Confidence 888877654322111000 00 00122322 2333222222 23688888876543 223222111 0233
Q ss_pred EEE-CC-eEEEEEEcCCCCeEEEEEeeCCeeEEEEEeCCCCCceeeEEEee-CCcEEEEe-cCCeEEEEeCCCC
Q 045569 261 GIY-NH-SLCLLLSHNIENYYDIWVMKYKCWIKQLSLGPLNGVRTPLGFWK-KGAFFVHS-TNEQLLLYDPNTQ 330 (362)
Q Consensus 261 ~~~-~g-~L~l~~~~~~~~~~~IW~l~~~~W~~~~~i~~~~~~~~~~~~~~-~g~il~~~-~~~~~~~yd~~~~ 330 (362)
... +| ++.+.+. ....+.||-++..+ ....+..... ...+++.. ++.+++.. .++.+..||+.++
T Consensus 276 ~~sp~~~~~lasgs--~D~~i~iwd~~~~~--~~~~~~H~~~-V~~vafsP~d~~~l~s~s~Dg~v~iW~~~~~ 344 (357)
T 4g56_B 276 AYSYHSSPFLASIS--EDCTVAVLDADFSE--VFRDLSHRDF-VTGVAWSPLDHSKFTTVGWDHKVLHHHLPSE 344 (357)
T ss_dssp EECSSSSCCEEEEE--TTSCEEEECTTSCE--EEEECCCSSC-EEEEEECSSSTTEEEEEETTSCEEEEECC--
T ss_pred EEcCCCCCEEEEEe--CCCEEEEEECCCCc--EeEECCCCCC-EEEEEEeCCCCCEEEEEcCCCeEEEEECCCC
Confidence 332 44 4444443 45789999776532 2333333222 23344443 67766654 4788999998654
No 108
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=69.91 E-value=46 Score=27.50 Aligned_cols=188 Identities=11% Similarity=0.068 Sum_probs=91.7
Q ss_pred eeeeeEEEeecCceEEEEeCCCcccccCCCCCcCCCCcccceeeeeeeeecCCCCCeEEEEEEEEeecccccccCcceEE
Q 045569 106 PYNGIFCIFGNNNRITLWNRATKESRVLPKCTTVFPKYTSIFCKCTGFGLDPMSTDYKLVLIFTLWNEKLDLLYEFSHVA 185 (362)
Q Consensus 106 s~~GLl~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~e 185 (362)
+.+++|+..+.++.+.|||..+++....-.... .. ...+.+++.. .+-+..- . ...+.
T Consensus 27 ~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~---~~------v~~~~~~~~~-~~l~~~~----~--------dg~i~ 84 (313)
T 3odt_A 27 VDDSKVASVSRDGTVRLWSKDDQWLGTVVYTGQ---GF------LNSVCYDSEK-ELLLFGG----K--------DTMIN 84 (313)
T ss_dssp EETTEEEEEETTSEEEEEEESSSEEEEEEEECS---SC------EEEEEEETTT-TEEEEEE----T--------TSCEE
T ss_pred cCCCEEEEEEcCCcEEEEECCCCEEEEEeecCC---cc------EEEEEECCCC-CEEEEec----C--------CCeEE
Confidence 344455555677779999987776443222111 11 4556666632 3222221 1 12467
Q ss_pred EEECCCC-CceecccCCCccccccCCcceEEECceEEEEeeccCCCccEEEEEEcCCceeeeecCCCCCCCCCcEEEE-E
Q 045569 186 VYSLSTN-SWRYCDCFKSNHYYMDGAFDSVYLDGVCYWLSEFRDNDHKVILSFHLGNEVFEEIQEPYIPESTPTILGI-Y 263 (362)
Q Consensus 186 Vyss~~~-~W~~~~~~~~~~~~~~~~~~~v~~~G~lywl~~~~~~~~~~il~fD~~~e~~~~i~~P~~~~~~~~~l~~-~ 263 (362)
+++.... ..+.+.....+.. .-..+..+|........ ...|..+|.. +....+...... ...+.. .
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~----~i~~~~~~~~~l~~~~~----d~~i~~~d~~-~~~~~~~~~~~~---v~~~~~~~ 152 (313)
T 3odt_A 85 GVPLFATSGEDPLYTLIGHQG----NVCSLSFQDGVVISGSW----DKTAKVWKEG-SLVYNLQAHNAS---VWDAKVVS 152 (313)
T ss_dssp EEETTCCTTSCC-CEECCCSS----CEEEEEEETTEEEEEET----TSEEEEEETT-EEEEEEECCSSC---EEEEEEEE
T ss_pred EEEeeecCCCCcccchhhccc----CEEEEEecCCEEEEEeC----CCCEEEEcCC-cEEEecccCCCc---eeEEEEcc
Confidence 7766543 1221111111000 12334445654444433 3468888832 222233221111 022222 2
Q ss_pred -CCeEEEEEEcCCCCeEEEEEeeCCeeEEEEEeCC-CCCceeeEEEeeCCcEEEEecCCeEEEEeCCCCcEE
Q 045569 264 -NHSLCLLLSHNIENYYDIWVMKYKCWIKQLSLGP-LNGVRTPLGFWKKGAFFVHSTNEQLLLYDPNTQEMR 333 (362)
Q Consensus 264 -~g~L~l~~~~~~~~~~~IW~l~~~~W~~~~~i~~-~~~~~~~~~~~~~g~il~~~~~~~~~~yd~~~~~~~ 333 (362)
++.+.+++. ....+.+|-... ....+.. .......+.+..++.++....++.+..||.++++..
T Consensus 153 ~~~~~l~~~~--~d~~i~i~d~~~----~~~~~~~~~~~~i~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~ 218 (313)
T 3odt_A 153 FSENKFLTAS--ADKTIKLWQNDK----VIKTFSGIHNDVVRHLAVVDDGHFISCSNDGLIKLVDMHTGDVL 218 (313)
T ss_dssp TTTTEEEEEE--TTSCEEEEETTE----EEEEECSSCSSCEEEEEEEETTEEEEEETTSEEEEEETTTCCEE
T ss_pred CCCCEEEEEE--CCCCEEEEecCc----eEEEEeccCcccEEEEEEcCCCeEEEccCCCeEEEEECCchhhh
Confidence 566655555 457899997322 2223332 222234455566777666666888999999887643
No 109
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=69.87 E-value=57 Score=28.55 Aligned_cols=95 Identities=16% Similarity=0.156 Sum_probs=52.8
Q ss_pred cEEEEEEcCCceeee-ecCCCCCCCCCcEEEEE-CCeEEEEEEcCCCCeEEEEEeeCCeeEEEEEe-CCCCC-ceeeEEE
Q 045569 232 KVILSFHLGNEVFEE-IQEPYIPESTPTILGIY-NHSLCLLLSHNIENYYDIWVMKYKCWIKQLSL-GPLNG-VRTPLGF 307 (362)
Q Consensus 232 ~~il~fD~~~e~~~~-i~~P~~~~~~~~~l~~~-~g~L~l~~~~~~~~~~~IW~l~~~~W~~~~~i-~~~~~-~~~~~~~ 307 (362)
..|..+|+.+.+... +...... .....+... +|.+.+++. ....+.||-++... ....+ ..... ...-+.+
T Consensus 154 g~i~iwd~~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~l~~~~--~d~~i~iwd~~~~~--~~~~~~~~~~~~~~~~~~~ 228 (402)
T 2aq5_A 154 NVILVWDVGTGAAVLTLGPDVHP-DTIYSVDWSRDGALICTSC--RDKRVRVIEPRKGT--VVAEKDRPHEGTRPVHAVF 228 (402)
T ss_dssp SCEEEEETTTTEEEEEECTTTCC-SCEEEEEECTTSSCEEEEE--TTSEEEEEETTTTE--EEEEEECSSCSSSCCEEEE
T ss_pred CEEEEEECCCCCccEEEecCCCC-CceEEEEECCCCCEEEEEe--cCCcEEEEeCCCCc--eeeeeccCCCCCcceEEEE
Confidence 368889988765532 3211111 111223322 566555555 46789999987733 33333 21111 1233444
Q ss_pred eeCCcEEEEe----cCCeEEEEeCCCCc
Q 045569 308 WKKGAFFVHS----TNEQLLLYDPNTQE 331 (362)
Q Consensus 308 ~~~g~il~~~----~~~~~~~yd~~~~~ 331 (362)
..+|.++... .++.+..||.++.+
T Consensus 229 ~~~~~~l~~g~~~~~d~~i~iwd~~~~~ 256 (402)
T 2aq5_A 229 VSEGKILTTGFSRMSERQVALWDTKHLE 256 (402)
T ss_dssp CSTTEEEEEEECTTCCEEEEEEETTBCS
T ss_pred cCCCcEEEEeccCCCCceEEEEcCcccc
Confidence 5677777765 46789999998754
No 110
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=69.42 E-value=53 Score=28.03 Aligned_cols=104 Identities=11% Similarity=0.140 Sum_probs=58.7
Q ss_pred ceEEEEeeccCCCccEEEEEEcCCceeeeecCCCCCCCCCcEEE-EECCeEEEEEEcCCCCeEEEEEeeCCeeEEEEEeC
Q 045569 218 GVCYWLSEFRDNDHKVILSFHLGNEVFEEIQEPYIPESTPTILG-IYNHSLCLLLSHNIENYYDIWVMKYKCWIKQLSLG 296 (362)
Q Consensus 218 G~lywl~~~~~~~~~~il~fD~~~e~~~~i~~P~~~~~~~~~l~-~~~g~L~l~~~~~~~~~~~IW~l~~~~W~~~~~i~ 296 (362)
|.+||..... ..|..+|..+.+...+..|... ..+. .-+|++.+... ..+.+|-.+.+.........
T Consensus 61 ~~l~~~d~~~----~~i~~~d~~~~~~~~~~~~~~v----~~i~~~~dg~l~v~~~----~gl~~~d~~~g~~~~~~~~~ 128 (326)
T 2ghs_A 61 GTAWWFNILE----RELHELHLASGRKTVHALPFMG----SALAKISDSKQLIASD----DGLFLRDTATGVLTLHAELE 128 (326)
T ss_dssp TEEEEEEGGG----TEEEEEETTTTEEEEEECSSCE----EEEEEEETTEEEEEET----TEEEEEETTTCCEEEEECSS
T ss_pred CEEEEEECCC----CEEEEEECCCCcEEEEECCCcc----eEEEEeCCCeEEEEEC----CCEEEEECCCCcEEEEeeCC
Confidence 7899997653 3799999999888777665321 2333 45788766542 23444433335544333221
Q ss_pred CCCCc--eeeEEEeeCCcEEEEec-------CCeEEEEeCCCCcEEEe
Q 045569 297 PLNGV--RTPLGFWKKGAFFVHST-------NEQLLLYDPNTQEMRDL 335 (362)
Q Consensus 297 ~~~~~--~~~~~~~~~g~il~~~~-------~~~~~~yd~~~~~~~~v 335 (362)
..... ...+.+..+|.+++... ...++.|| +++.+.+
T Consensus 129 ~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~~~~~ 174 (326)
T 2ghs_A 129 SDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KGKVTKL 174 (326)
T ss_dssp TTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TTEEEEE
T ss_pred CCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--CCcEEEe
Confidence 11111 22344455788877643 24688888 4665543
No 111
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=69.37 E-value=72 Score=31.54 Aligned_cols=66 Identities=15% Similarity=0.211 Sum_probs=39.5
Q ss_pred cceEEE---CceEEEEeeccCCCccEEEEEEcCCceeeee-cCCCCCCCCCcEEEEECCeEEEEEEcCCCCeEEEEEee
Q 045569 211 FDSVYL---DGVCYWLSEFRDNDHKVILSFHLGNEVFEEI-QEPYIPESTPTILGIYNHSLCLLLSHNIENYYDIWVMK 285 (362)
Q Consensus 211 ~~~v~~---~G~lywl~~~~~~~~~~il~fD~~~e~~~~i-~~P~~~~~~~~~l~~~~g~L~l~~~~~~~~~~~IW~l~ 285 (362)
..++.+ +|.|||.... ...|.++|+....-+.+ ..+..... ...|...++.|+++... .-.|++.+
T Consensus 560 P~GLavD~~~~~LYwaD~~----~~~I~~~d~dG~~~~~v~~~~~~l~~-P~glav~~~~lYwtD~~----~~~I~~~d 629 (791)
T 3m0c_C 560 PNGITLDLLSGRLYWVDSK----LHSISSIDVNGGNRKTILEDEKRLAH-PFSLAVFEDKVFWTDII----NEAIFSAN 629 (791)
T ss_dssp EEEEEEETTTTEEEEEETT----TTEEEEEETTSCSCEEEEECTTTTSS-EEEEEEETTEEEEEETT----TTEEEEEE
T ss_pred ceEEEEecCCCeEEEEeCC----CCcEEEEecCCCceEEEecCCCccCC-CCEEEEeCCEEEEEECC----CCEEEEEe
Confidence 445554 4899999754 35899999976544433 22211111 15677788888877642 22455554
No 112
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=69.33 E-value=92 Score=30.79 Aligned_cols=156 Identities=13% Similarity=0.025 Sum_probs=82.0
Q ss_pred eeeeeecCCCCCeEEEEEEEEeecccccccCcceEEEEECCCCCceecccCCCccccccCCcceEEE---CceEEEEeec
Q 045569 150 CTGFGLDPMSTDYKLVLIFTLWNEKLDLLYEFSHVAVYSLSTNSWRYCDCFKSNHYYMDGAFDSVYL---DGVCYWLSEF 226 (362)
Q Consensus 150 ~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~eVyss~~~~W~~~~~~~~~~~~~~~~~~~v~~---~G~lywl~~~ 226 (362)
..|+++|...+. |+..- . ....++++++.+..-+.+.... +. ...++.+ +|.|||....
T Consensus 473 P~GLAvD~~~~~--LY~tD--~--------~~~~I~v~~ldG~~~~~l~~~~--l~----~P~gIaVDp~~g~LYwtD~g 534 (791)
T 3m0c_C 473 PDGLAVDWIHSN--IYWTD--S--------VLGTVSVADTKGVKRKTLFREN--GS----KPRAIVVDPVHGFMYWTDWG 534 (791)
T ss_dssp CCEEEEETTTTE--EEEEE--T--------TTTEEEEEETTSSSEEEEEECT--TC----CEEEEEEETTTTEEEEEECS
T ss_pred cceeeeeecCCc--EEEEe--c--------CCCeEEEEeCCCCeEEEEEeCC--CC----CcceEEEecCCCCEEEecCC
Confidence 467888876543 22221 1 1236888888765544432211 11 1345655 5899998854
Q ss_pred cCCCccEEEEEEcCCceeeeecCCCCCCCCCcEEEE--ECCeEEEEEEcCCCCeEEEEEeeC-CeeEEEEEeCCCCCcee
Q 045569 227 RDNDHKVILSFHLGNEVFEEIQEPYIPESTPTILGI--YNHSLCLLLSHNIENYYDIWVMKY-KCWIKQLSLGPLNGVRT 303 (362)
Q Consensus 227 ~~~~~~~il~fD~~~e~~~~i~~P~~~~~~~~~l~~--~~g~L~l~~~~~~~~~~~IW~l~~-~~W~~~~~i~~~~~~~~ 303 (362)
. ...|..+++....-..+-. .... ....|+. .+|+|+++.. .... ||+.+- +.-.++. +.....+..
T Consensus 535 ~---~~~I~~~~~dG~~~~~lv~-~~l~-~P~GLavD~~~~~LYwaD~--~~~~--I~~~d~dG~~~~~v-~~~~~~l~~ 604 (791)
T 3m0c_C 535 T---PAKIKKGGLNGVDIYSLVT-ENIQ-WPNGITLDLLSGRLYWVDS--KLHS--ISSIDVNGGNRKTI-LEDEKRLAH 604 (791)
T ss_dssp S---SCEEEEEETTSCCEEEEEC-SSCS-CEEEEEEETTTTEEEEEET--TTTE--EEEEETTSCSCEEE-EECTTTTSS
T ss_pred C---CCeEEEEecCCCceEEEEe-CCCC-CceEEEEecCCCeEEEEeC--CCCc--EEEEecCCCceEEE-ecCCCccCC
Confidence 3 3479999997654443321 1111 1133444 3788888764 2344 555543 2211111 111122345
Q ss_pred eEEEee-CCcEEEEec-CCeEEEEeCCCCcEE
Q 045569 304 PLGFWK-KGAFFVHST-NEQLLLYDPNTQEMR 333 (362)
Q Consensus 304 ~~~~~~-~g~il~~~~-~~~~~~yd~~~~~~~ 333 (362)
|+++.- ++.||+... ...|...|..+++-.
T Consensus 605 P~glav~~~~lYwtD~~~~~I~~~dk~tG~~~ 636 (791)
T 3m0c_C 605 PFSLAVFEDKVFWTDIINEAIFSANRLTGSDV 636 (791)
T ss_dssp EEEEEEETTEEEEEETTTTEEEEEETTTCCCC
T ss_pred CCEEEEeCCEEEEEECCCCEEEEEeCCCCcce
Confidence 665543 456776654 567889997776543
No 113
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=69.10 E-value=50 Score=27.65 Aligned_cols=136 Identities=10% Similarity=0.038 Sum_probs=79.6
Q ss_pred ceEEEEECCCCCce-ecccCCCccccccCCcce-EEECceEEEEeeccCCCccEEEEEEcCCcee-eeecCCCCCCCCCc
Q 045569 182 SHVAVYSLSTNSWR-YCDCFKSNHYYMDGAFDS-VYLDGVCYWLSEFRDNDHKVILSFHLGNEVF-EEIQEPYIPESTPT 258 (362)
Q Consensus 182 ~~~eVyss~~~~W~-~~~~~~~~~~~~~~~~~~-v~~~G~lywl~~~~~~~~~~il~fD~~~e~~-~~i~~P~~~~~~~~ 258 (362)
..+.+++..++.=. .+...+..+ ..+ ...++.+|-+.... ..+.+||..+.+- ..++.|.. + .
T Consensus 65 S~v~~vD~~Tgkv~~~~~l~~~~F------geGit~~g~~ly~ltw~~----~~v~v~D~~t~~~~~ti~~~~e---G-~ 130 (262)
T 3nol_A 65 SSIRKVDIESGKTLQQIELGKRYF------GEGISDWKDKIVGLTWKN----GLGFVWNIRNLRQVRSFNYDGE---G-W 130 (262)
T ss_dssp EEEEEECTTTCCEEEEEECCTTCC------EEEEEEETTEEEEEESSS----SEEEEEETTTCCEEEEEECSSC---C-C
T ss_pred ceEEEEECCCCcEEEEEecCCccc------eeEEEEeCCEEEEEEeeC----CEEEEEECccCcEEEEEECCCC---c-e
Confidence 46889999987432 222211111 223 45577898887653 4899999987544 56777642 1 3
Q ss_pred EEEEECCeEEEEEEcCCCCeEEEEEeeCCeeEEEEEeCCCC-C--cee--eEEEeeCCcEEEEe-cCCeEEEEeCCCCcE
Q 045569 259 ILGIYNHSLCLLLSHNIENYYDIWVMKYKCWIKQLSLGPLN-G--VRT--PLGFWKKGAFFVHS-TNEQLLLYDPNTQEM 332 (362)
Q Consensus 259 ~l~~~~g~L~l~~~~~~~~~~~IW~l~~~~W~~~~~i~~~~-~--~~~--~~~~~~~g~il~~~-~~~~~~~yd~~~~~~ 332 (362)
-|+.-++.|++... .. .||+++-..=..+.+|.... . +.. -+. +.+|+|+... ..+.+..-|++++++
T Consensus 131 glt~dg~~L~~SdG---s~--~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe-~~~G~lyan~w~~~~I~vIDp~tG~V 204 (262)
T 3nol_A 131 GLTHNDQYLIMSDG---TP--VLRFLDPESLTPVRTITVTAHGEELPELNELE-WVDGEIFANVWQTNKIVRIDPETGKV 204 (262)
T ss_dssp CEEECSSCEEECCS---SS--EEEEECTTTCSEEEEEECEETTEECCCEEEEE-EETTEEEEEETTSSEEEEECTTTCBE
T ss_pred EEecCCCEEEEECC---CC--eEEEEcCCCCeEEEEEEeccCCccccccceeE-EECCEEEEEEccCCeEEEEECCCCcE
Confidence 45555666766442 22 47777763333445554321 0 111 122 3378887665 367899999999987
Q ss_pred E-EeeE
Q 045569 333 R-DLGR 337 (362)
Q Consensus 333 ~-~v~~ 337 (362)
. .+..
T Consensus 205 ~~~Id~ 210 (262)
T 3nol_A 205 TGIIDL 210 (262)
T ss_dssp EEEEEC
T ss_pred EEEEEC
Confidence 4 4554
No 114
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=69.04 E-value=53 Score=27.86 Aligned_cols=93 Identities=8% Similarity=0.031 Sum_probs=52.5
Q ss_pred cEEEEEEcCCceeeee----cCCCCCCCCCcEEEEE-CCe-EEEEEEcCCCCeEEEEEeeC---CeeEEEEEeCCCCCce
Q 045569 232 KVILSFHLGNEVFEEI----QEPYIPESTPTILGIY-NHS-LCLLLSHNIENYYDIWVMKY---KCWIKQLSLGPLNGVR 302 (362)
Q Consensus 232 ~~il~fD~~~e~~~~i----~~P~~~~~~~~~l~~~-~g~-L~l~~~~~~~~~~~IW~l~~---~~W~~~~~i~~~~~~~ 302 (362)
..|..+|..+.+...+ ..|. .++.. +|+ |++... ....+.++-++. ........+ .. .
T Consensus 165 g~v~~~d~~~~~~~~~~~~~~~p~-------gia~~~dg~~lyv~d~--~~~~I~~~~~~~~~~~~~~~~~~~---~g-P 231 (322)
T 2fp8_A 165 GRLIKYDPSTKETTLLLKELHVPG-------GAEVSADSSFVLVAEF--LSHQIVKYWLEGPKKGTAEVLVKI---PN-P 231 (322)
T ss_dssp EEEEEEETTTTEEEEEEEEESCCC-------EEEECTTSSEEEEEEG--GGTEEEEEESSSTTTTCEEEEEEC---SS-E
T ss_pred ceEEEEeCCCCEEEEeccCCccCc-------ceEECCCCCEEEEEeC--CCCeEEEEECCCCcCCccceEEeC---CC-C
Confidence 5799999987766543 2221 23332 455 665544 234555555543 333333322 12 3
Q ss_pred eeEEEeeCCcEEEEecC-----------CeEEEEeCCCCcEEEeeE
Q 045569 303 TPLGFWKKGAFFVHSTN-----------EQLLLYDPNTQEMRDLGR 337 (362)
Q Consensus 303 ~~~~~~~~g~il~~~~~-----------~~~~~yd~~~~~~~~v~~ 337 (362)
.-+++..+|.|++.... ..+..||++.+.++.+..
T Consensus 232 ~gi~~d~~G~l~va~~~~~~~~~~~~~~~~v~~~d~~G~~~~~~~~ 277 (322)
T 2fp8_A 232 GNIKRNADGHFWVSSSEELDGNMHGRVDPKGIKFDEFGNILEVIPL 277 (322)
T ss_dssp EEEEECTTSCEEEEEEEETTSSTTSCEEEEEEEECTTSCEEEEEEC
T ss_pred CCeEECCCCCEEEEecCcccccccCCCccEEEEECCCCCEEEEEEC
Confidence 33455567888887643 469999998766666654
No 115
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=68.86 E-value=76 Score=29.61 Aligned_cols=113 Identities=7% Similarity=0.026 Sum_probs=66.8
Q ss_pred CceEEEEeeccCCCccEEEEEEcCCceeee-ecCCCCCCCCC-cEEEEEC-CeEEEEEEcCCCCeEEEEEeeC-----Ce
Q 045569 217 DGVCYWLSEFRDNDHKVILSFHLGNEVFEE-IQEPYIPESTP-TILGIYN-HSLCLLLSHNIENYYDIWVMKY-----KC 288 (362)
Q Consensus 217 ~G~lywl~~~~~~~~~~il~fD~~~e~~~~-i~~P~~~~~~~-~~l~~~~-g~L~l~~~~~~~~~~~IW~l~~-----~~ 288 (362)
+|...+.+... ...|..+|+.+.+... ++......... ..+..-+ |.+.+... .....+.||-++. ..
T Consensus 334 dg~~l~va~~~---~~~v~v~D~~tg~l~~~i~~g~~ph~g~g~~~~~p~~g~~~~s~~-~~d~~V~v~d~~~~~~~~~~ 409 (543)
T 1nir_A 334 SHRYFMTAANN---SNKVAVIDSKDRRLSALVDVGKTPHPGRGANFVHPKYGPVWSTSH-LGDGSISLIGTDPKNHPQYA 409 (543)
T ss_dssp TSCEEEEEEGG---GTEEEEEETTTTEEEEEEECSSSBCCTTCEEEEETTTEEEEEEEB-SSSSEEEEEECCTTTCTTTB
T ss_pred CCCEEEEEecC---CCeEEEEECCCCeEEEeeccCCCCCCCCCcccCCCCCccEEEecc-CCCceEEEEEeCCCCCchhc
Confidence 56644444332 3478889999877643 44321111111 2333333 55554433 2457899999976 34
Q ss_pred eEEEEEeCCCCCceeeEEEeeCCcEEEEec--------CCeEEEEeCCCCcEE
Q 045569 289 WIKQLSLGPLNGVRTPLGFWKKGAFFVHST--------NEQLLLYDPNTQEMR 333 (362)
Q Consensus 289 W~~~~~i~~~~~~~~~~~~~~~g~il~~~~--------~~~~~~yd~~~~~~~ 333 (362)
|..+.++.....-...+.+..+|+.++... +..+.+||.++.+..
T Consensus 410 ~~~v~~l~~~g~~~~~v~~~pdg~~l~v~~~~~~~~~~~~~v~v~d~~~~~~~ 462 (543)
T 1nir_A 410 WKKVAELQGQGGGSLFIKTHPKSSHLYVDTTFNPDARISQSVAVFDLKNLDAK 462 (543)
T ss_dssp TSEEEEEECSCSCCCCEECCTTCCEEEECCTTCSSHHHHTCEEEEETTCTTSC
T ss_pred CeEEEEEEcCCCCceEEEcCCCCCcEEEecCCCCCcccCceEEEEECCCCCCC
Confidence 998888875332223455666777666543 458999999987653
No 116
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=68.11 E-value=91 Score=30.25 Aligned_cols=190 Identities=14% Similarity=0.192 Sum_probs=93.7
Q ss_pred eee-eEEEeecCceEEEEeCCCcccccCCCCCcCCCCcccceeeeeeeeecCCCCCeEEEEEEEEeecccccccCcceEE
Q 045569 107 YNG-IFCIFGNNNRITLWNRATKESRVLPKCTTVFPKYTSIFCKCTGFGLDPMSTDYKLVLIFTLWNEKLDLLYEFSHVA 185 (362)
Q Consensus 107 ~~G-Ll~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~e 185 (362)
.+| +|...+.++.+.|||..+++....-... ... ...+.+.|... + ++... . ...+.
T Consensus 65 ~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~---~~~------v~~~~~s~~~~-~-l~~~~----~-------dg~i~ 122 (814)
T 3mkq_A 65 ARKNWIIVGSDDFRIRVFNYNTGEKVVDFEAH---PDY------IRSIAVHPTKP-Y-VLSGS----D-------DLTVK 122 (814)
T ss_dssp GGGTEEEEEETTSEEEEEETTTCCEEEEEECC---SSC------EEEEEECSSSS-E-EEEEE----T-------TSEEE
T ss_pred CCCCEEEEEeCCCeEEEEECCCCcEEEEEecC---CCC------EEEEEEeCCCC-E-EEEEc----C-------CCEEE
Confidence 344 4444466778999999888754321111 111 45566666432 2 22221 1 13588
Q ss_pred EEECCCCCceecccCCCccccccCCcceEEE---CceEEEEeeccCCCccEEEEEEcCCceee-eecCCCCCCCCCcEEE
Q 045569 186 VYSLSTNSWRYCDCFKSNHYYMDGAFDSVYL---DGVCYWLSEFRDNDHKVILSFHLGNEVFE-EIQEPYIPESTPTILG 261 (362)
Q Consensus 186 Vyss~~~~W~~~~~~~~~~~~~~~~~~~v~~---~G~lywl~~~~~~~~~~il~fD~~~e~~~-~i~~P~~~~~~~~~l~ 261 (362)
+|+..++ |.........-. .-.++.+ +|........ ...|..+|+.+.+-. .+..+..... ..+.
T Consensus 123 vw~~~~~-~~~~~~~~~~~~----~v~~~~~~p~~~~~l~~~~~----dg~v~vwd~~~~~~~~~~~~~~~~~v--~~~~ 191 (814)
T 3mkq_A 123 LWNWENN-WALEQTFEGHEH----FVMCVAFNPKDPSTFASGCL----DRTVKVWSLGQSTPNFTLTTGQERGV--NYVD 191 (814)
T ss_dssp EEEGGGT-SEEEEEEECCSS----CEEEEEEETTEEEEEEEEET----TSEEEEEETTCSSCSEEEECCCTTCC--CEEE
T ss_pred EEECCCC-ceEEEEEcCCCC----cEEEEEEEcCCCCEEEEEeC----CCeEEEEECCCCcceeEEecCCCCCE--EEEE
Confidence 8888765 221111100000 0122222 3444333333 247888998664432 2222211111 2233
Q ss_pred EE---CCeEEEEEEcCCCCeEEEEEeeCCeeEEEEEeCCCCCceeeEEEeeCCcEEEEec-CCeEEEEeCCCCcEE
Q 045569 262 IY---NHSLCLLLSHNIENYYDIWVMKYKCWIKQLSLGPLNGVRTPLGFWKKGAFFVHST-NEQLLLYDPNTQEMR 333 (362)
Q Consensus 262 ~~---~g~L~l~~~~~~~~~~~IW~l~~~~W~~~~~i~~~~~~~~~~~~~~~g~il~~~~-~~~~~~yd~~~~~~~ 333 (362)
.. +|.+.+++. ....+.+|-++... ....+.........+.+..+|.+++... ++.+..||..+++..
T Consensus 192 ~~~~~~~~~l~~~~--~dg~i~~~d~~~~~--~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~ 263 (814)
T 3mkq_A 192 YYPLPDKPYMITAS--DDLTIKIWDYQTKS--CVATLEGHMSNVSFAVFHPTLPIIISGSEDGTLKIWNSSTYKVE 263 (814)
T ss_dssp ECCSTTCCEEEEEC--TTSEEEEEETTTTE--EEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCSEE
T ss_pred EEECCCCCEEEEEe--CCCEEEEEECCCCc--EEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEE
Confidence 22 566555554 45789999887632 2333332222223445556676665544 678999999886643
No 117
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=67.35 E-value=58 Score=27.73 Aligned_cols=189 Identities=15% Similarity=0.110 Sum_probs=88.2
Q ss_pred EeecCceEEEEeCCCcccccCCCCCcCCCCcccceeeeeeeeecCCCCCeEEEEEEEEeecccccccCcceEEEEECCCC
Q 045569 113 IFGNNNRITLWNRATKESRVLPKCTTVFPKYTSIFCKCTGFGLDPMSTDYKLVLIFTLWNEKLDLLYEFSHVAVYSLSTN 192 (362)
Q Consensus 113 ~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~eVyss~~~ 192 (362)
..+.++.+.|||..++++..+-.... +.. ....+.+.+. +++-+. .. . ...+.+|+..++
T Consensus 25 ~~~~d~~v~i~~~~~~~~~~~~~~~~--h~~-----~v~~~~~~~~-~~~l~~-~~----~-------dg~i~vwd~~~~ 84 (372)
T 1k8k_C 25 ICPNNHEVHIYEKSGNKWVQVHELKE--HNG-----QVTGVDWAPD-SNRIVT-CG----T-------DRNAYVWTLKGR 84 (372)
T ss_dssp EECSSSEEEEEEEETTEEEEEEEEEC--CSS-----CEEEEEEETT-TTEEEE-EE----T-------TSCEEEEEEETT
T ss_pred EEeCCCEEEEEeCCCCcEEeeeeecC--CCC-----cccEEEEeCC-CCEEEE-Ec----C-------CCeEEEEECCCC
Confidence 33456678999988885322211111 111 1456666663 233222 11 1 125888888887
Q ss_pred CceecccCCCccccccCCcceEEE--CceEEEEeeccCCCccEEEEEEcCCce-e---eeecCCCCCCCCCcEEEEE-CC
Q 045569 193 SWRYCDCFKSNHYYMDGAFDSVYL--DGVCYWLSEFRDNDHKVILSFHLGNEV-F---EEIQEPYIPESTPTILGIY-NH 265 (362)
Q Consensus 193 ~W~~~~~~~~~~~~~~~~~~~v~~--~G~lywl~~~~~~~~~~il~fD~~~e~-~---~~i~~P~~~~~~~~~l~~~-~g 265 (362)
.+.........-. .-..+.+ +|........ ...|..+|+.+.. + ..+..+.. .....+... +|
T Consensus 85 ~~~~~~~~~~~~~----~v~~~~~~~~~~~l~~~~~----d~~v~i~d~~~~~~~~~~~~~~~~~~--~~i~~~~~~~~~ 154 (372)
T 1k8k_C 85 TWKPTLVILRINR----AARCVRWAPNEKKFAVGSG----SRVISICYFEQENDWWVCKHIKKPIR--STVLSLDWHPNS 154 (372)
T ss_dssp EEEEEEECCCCSS----CEEEEEECTTSSEEEEEET----TSSEEEEEEETTTTEEEEEEECTTCC--SCEEEEEECTTS
T ss_pred eeeeeEEeecCCC----ceeEEEECCCCCEEEEEeC----CCEEEEEEecCCCcceeeeeeecccC--CCeeEEEEcCCC
Confidence 6654322111000 0111222 3433333332 2246666665543 1 22222211 111233322 55
Q ss_pred eEEEEEEcCCCCeEEEEEeeC---------C-------eeEEEEEeCCCCCceeeEEEeeCCcEEEE-ecCCeEEEEeCC
Q 045569 266 SLCLLLSHNIENYYDIWVMKY---------K-------CWIKQLSLGPLNGVRTPLGFWKKGAFFVH-STNEQLLLYDPN 328 (362)
Q Consensus 266 ~L~l~~~~~~~~~~~IW~l~~---------~-------~W~~~~~i~~~~~~~~~~~~~~~g~il~~-~~~~~~~~yd~~ 328 (362)
.+.+++. ....+.+|-+.. . .-.....+.........+.+..++..++. ..++.+..||.+
T Consensus 155 ~~l~~~~--~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~ 232 (372)
T 1k8k_C 155 VLLAAGS--CDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADAD 232 (372)
T ss_dssp SEEEEEE--TTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEEEETTTEEEEEEGG
T ss_pred CEEEEEc--CCCCEEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEECCCCCEEEEEeCCCEEEEEECC
Confidence 5555554 457899999642 1 11233333322222233445556665554 457789999998
Q ss_pred CCcEE
Q 045569 329 TQEMR 333 (362)
Q Consensus 329 ~~~~~ 333 (362)
+++..
T Consensus 233 ~~~~~ 237 (372)
T 1k8k_C 233 KKMAV 237 (372)
T ss_dssp GTTEE
T ss_pred CCcee
Confidence 77643
No 118
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=66.98 E-value=69 Score=28.45 Aligned_cols=185 Identities=11% Similarity=0.078 Sum_probs=91.3
Q ss_pred ceEEEEeCCCcccccCCCCCcCCCCcccceeeeeeeeecCCCCCeEEEEEEEEeecccccccCcceEEEEECCCCCceec
Q 045569 118 NRITLWNRATKESRVLPKCTTVFPKYTSIFCKCTGFGLDPMSTDYKLVLIFTLWNEKLDLLYEFSHVAVYSLSTNSWRYC 197 (362)
Q Consensus 118 ~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~eVyss~~~~W~~~ 197 (362)
..+.++|..++..+.|..... . ...+.+.|..+ +++... ... ....+.+++..++.-+.+
T Consensus 159 ~~i~i~d~~g~~~~~l~~~~~----~------v~~~~~Spdg~--~la~~s--~~~------~~~~i~~~d~~tg~~~~l 218 (415)
T 2hqs_A 159 YELRVSDYDGYNQFVVHRSPQ----P------LMSPAWSPDGS--KLAYVT--FES------GRSALVIQTLANGAVRQV 218 (415)
T ss_dssp EEEEEEETTSCSCEEEEEESS----C------EEEEEECTTSS--EEEEEE--CTT------SSCEEEEEETTTCCEEEE
T ss_pred ceEEEEcCCCCCCEEEeCCCC----c------ceeeEEcCCCC--EEEEEE--ecC------CCcEEEEEECCCCcEEEe
Confidence 579999987665544432111 1 45566666433 233222 111 124689999998876654
Q ss_pred ccCCCccccccCCcceEEECce-EEEEeeccCCCccEEEEEEcCCceeeeecCCCCCCCCCcEEEE-ECCeEEEEEEcCC
Q 045569 198 DCFKSNHYYMDGAFDSVYLDGV-CYWLSEFRDNDHKVILSFHLGNEVFEEIQEPYIPESTPTILGI-YNHSLCLLLSHNI 275 (362)
Q Consensus 198 ~~~~~~~~~~~~~~~~v~~~G~-lywl~~~~~~~~~~il~fD~~~e~~~~i~~P~~~~~~~~~l~~-~~g~L~l~~~~~~ 275 (362)
........ .....-+|. +.+..... ....|..+|+.+.+...+.... .. ...+.- -+|+..++... .
T Consensus 219 ~~~~~~~~-----~~~~spdg~~la~~~~~~--g~~~i~~~d~~~~~~~~l~~~~--~~-~~~~~~spdg~~l~~~s~-~ 287 (415)
T 2hqs_A 219 ASFPRHNG-----APAFSPDGSKLAFALSKT--GSLNLYVMDLASGQIRQVTDGR--SN-NTEPTWFPDSQNLAFTSD-Q 287 (415)
T ss_dssp ECCSSCEE-----EEEECTTSSEEEEEECTT--SSCEEEEEETTTCCEEECCCCS--SC-EEEEEECTTSSEEEEEEC-T
T ss_pred ecCCCccc-----CEEEcCCCCEEEEEEecC--CCceEEEEECCCCCEEeCcCCC--Cc-ccceEECCCCCEEEEEEC-C
Confidence 43221000 111122464 44444322 1346899999887765442211 11 022222 25664444432 2
Q ss_pred CCeEEEEEeeC--CeeEEEEEeCCCCCceeeEEEeeCCcEEEE-ec---CCeEEEEeCCCCcEEEee
Q 045569 276 ENYYDIWVMKY--KCWIKQLSLGPLNGVRTPLGFWKKGAFFVH-ST---NEQLLLYDPNTQEMRDLG 336 (362)
Q Consensus 276 ~~~~~IW~l~~--~~W~~~~~i~~~~~~~~~~~~~~~g~il~~-~~---~~~~~~yd~~~~~~~~v~ 336 (362)
.....||.++- .. ...+.........+.+..+|+.++. .. ...+..+|+++++.+.+.
T Consensus 288 ~g~~~i~~~d~~~~~---~~~l~~~~~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~~~~~~l~ 351 (415)
T 2hqs_A 288 AGRPQVYKVNINGGA---PQRITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGVQVLS 351 (415)
T ss_dssp TSSCEEEEEETTSSC---CEECCCSSSEEEEEEECTTSSEEEEEEECSSCEEEEEEETTTCCEEECC
T ss_pred CCCcEEEEEECCCCC---EEEEecCCCcccCeEECCCCCEEEEEECcCCceEEEEEECCCCCEEEec
Confidence 23446666654 22 1222221122223344567765444 33 247999999998876543
No 119
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=66.83 E-value=62 Score=27.89 Aligned_cols=191 Identities=11% Similarity=0.060 Sum_probs=87.2
Q ss_pred eEEEeecCceEEEEeCCCcccccCCCCCcCCCCcccceeeeeeeeecCCCCCeEEEEEEEEeecccccccCcceEEEEEC
Q 045569 110 IFCIFGNNNRITLWNRATKESRVLPKCTTVFPKYTSIFCKCTGFGLDPMSTDYKLVLIFTLWNEKLDLLYEFSHVAVYSL 189 (362)
Q Consensus 110 Ll~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~eVyss 189 (362)
+++..+.++.+.+||..+++....-.... . ...+.+.+...+-+.+.... . ...+.+|+.
T Consensus 114 ~l~s~~~d~~i~iwd~~~~~~~~~~~~~~----~------~~~~~~~~~~~~~~~~~~~~--~--------~~~v~~~d~ 173 (408)
T 4a11_B 114 MFTSSSFDKTLKVWDTNTLQTADVFNFEE----T------VYSHHMSPVSTKHCLVAVGT--R--------GPKVQLCDL 173 (408)
T ss_dssp CEEEEETTSEEEEEETTTTEEEEEEECSS----C------EEEEEECSSCSSCCEEEEEE--S--------SSSEEEEES
T ss_pred EEEEEeCCCeEEEeeCCCCccceeccCCC----c------eeeeEeecCCCCCcEEEEEc--C--------CCeEEEEeC
Confidence 45555666779999998877554322111 1 34455555444333444331 1 125888988
Q ss_pred CCCCcee-cccCCCccccccCCcceEEE--Cce-EEEEeeccCCCccEEEEEEcCCce--eeeecCCC-----------C
Q 045569 190 STNSWRY-CDCFKSNHYYMDGAFDSVYL--DGV-CYWLSEFRDNDHKVILSFHLGNEV--FEEIQEPY-----------I 252 (362)
Q Consensus 190 ~~~~W~~-~~~~~~~~~~~~~~~~~v~~--~G~-lywl~~~~~~~~~~il~fD~~~e~--~~~i~~P~-----------~ 252 (362)
+++.-.. ...... + -.++.+ +|. +...... ...|..+|+.+.. ...+.... .
T Consensus 174 ~~~~~~~~~~~~~~--~-----v~~~~~~~~~~~ll~~~~~----dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (408)
T 4a11_B 174 KSGSCSHILQGHRQ--E-----ILAVSWSPRYDYILATASA----DSRVKLWDVRRASGCLITLDQHNGKKSQAVESANT 242 (408)
T ss_dssp SSSCCCEEECCCCS--C-----EEEEEECSSCTTEEEEEET----TSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSC
T ss_pred CCcceeeeecCCCC--c-----EEEEEECCCCCcEEEEEcC----CCcEEEEECCCCCcccccccccccccceeeccccc
Confidence 7653221 111100 0 111211 222 2222222 2357778876543 22221100 0
Q ss_pred CCCCC-cEEEEE-CCeEEEEEEcCCCCeEEEEEeeCCeeEEEEEeC--CCC--CceeeEEEeeCCcEEEEecCCeEEEEe
Q 045569 253 PESTP-TILGIY-NHSLCLLLSHNIENYYDIWVMKYKCWIKQLSLG--PLN--GVRTPLGFWKKGAFFVHSTNEQLLLYD 326 (362)
Q Consensus 253 ~~~~~-~~l~~~-~g~L~l~~~~~~~~~~~IW~l~~~~W~~~~~i~--~~~--~~~~~~~~~~~g~il~~~~~~~~~~yd 326 (362)
..... ..+... +|...+++. ....+.+|-++...-....... ... ...........+.+++...++.+..||
T Consensus 243 ~~~~~v~~~~~~~~~~~l~~~~--~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d 320 (408)
T 4a11_B 243 AHNGKVNGLCFTSDGLHLLTVG--TDNRMRLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYGSTIAVYT 320 (408)
T ss_dssp SCSSCEEEEEECTTSSEEEEEE--TTSCEEEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEETTEEEEEE
T ss_pred cccCceeEEEEcCCCCEEEEec--CCCeEEEEECCCCccceeccccccccccccceeEEecCCCceEEEEecCCEEEEEE
Confidence 01111 233322 555555554 3578999999872111111000 000 011111111235566666788899999
Q ss_pred CCCCcEE
Q 045569 327 PNTQEMR 333 (362)
Q Consensus 327 ~~~~~~~ 333 (362)
..+++..
T Consensus 321 ~~~~~~~ 327 (408)
T 4a11_B 321 VYSGEQI 327 (408)
T ss_dssp TTTCCEE
T ss_pred CcCCcce
Confidence 8876643
No 120
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=66.47 E-value=62 Score=27.71 Aligned_cols=99 Identities=8% Similarity=0.033 Sum_probs=55.3
Q ss_pred EEEEEEcCCceeeee-cCCCCCCCCCcEEEEE-CCeEEEEEEcCCCCeEEEEEeeC-CeeEEEEEeCCCCCceeeEEEee
Q 045569 233 VILSFHLGNEVFEEI-QEPYIPESTPTILGIY-NHSLCLLLSHNIENYYDIWVMKY-KCWIKQLSLGPLNGVRTPLGFWK 309 (362)
Q Consensus 233 ~il~fD~~~e~~~~i-~~P~~~~~~~~~l~~~-~g~L~l~~~~~~~~~~~IW~l~~-~~W~~~~~i~~~~~~~~~~~~~~ 309 (362)
.|..+|..++.+..+ .+...... ...+... +|++.+.+. ....+.||.++. ..+.....+.........+.+..
T Consensus 84 ~v~iw~~~~~~~~~~~~~~~h~~~-v~~v~~sp~~~~l~s~s--~D~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~p 160 (345)
T 3fm0_A 84 TTCIWKKNQDDFECVTTLEGHENE-VKSVAWAPSGNLLATCS--RDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHP 160 (345)
T ss_dssp CEEEEEECCC-EEEEEEECCCSSC-EEEEEECTTSSEEEEEE--TTSCEEEEEECTTSCEEEEEEECCCCSCEEEEEECS
T ss_pred cEEEEEccCCCeEEEEEccCCCCC-ceEEEEeCCCCEEEEEE--CCCeEEEEECCCCCCeEEEEEecCcCCCeEEEEECC
Confidence 567777776655433 22221111 0223322 566655555 467899999987 55555555543222223444555
Q ss_pred CCcEEEEe-cCCeEEEEeCCCCcEEE
Q 045569 310 KGAFFVHS-TNEQLLLYDPNTQEMRD 334 (362)
Q Consensus 310 ~g~il~~~-~~~~~~~yd~~~~~~~~ 334 (362)
++++++.. .++.+..||.+++++..
T Consensus 161 ~~~~l~s~s~d~~i~~w~~~~~~~~~ 186 (345)
T 3fm0_A 161 SQELLASASYDDTVKLYREEEDDWVC 186 (345)
T ss_dssp SSSCEEEEETTSCEEEEEEETTEEEE
T ss_pred CCCEEEEEeCCCcEEEEEecCCCEEE
Confidence 66665544 47789999988876543
No 121
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=66.21 E-value=58 Score=27.29 Aligned_cols=92 Identities=13% Similarity=0.088 Sum_probs=46.8
Q ss_pred cEEEEEEcCCceee-eecCCCCCCCCCcEEEEECCeEEEEEEcCCCCeEEEEEeeCCeeEEEEEeCCC---------CCc
Q 045569 232 KVILSFHLGNEVFE-EIQEPYIPESTPTILGIYNHSLCLLLSHNIENYYDIWVMKYKCWIKQLSLGPL---------NGV 301 (362)
Q Consensus 232 ~~il~fD~~~e~~~-~i~~P~~~~~~~~~l~~~~g~L~l~~~~~~~~~~~IW~l~~~~W~~~~~i~~~---------~~~ 301 (362)
..|..+|+.+.+-. .+...... ..+....+...+++. ....+.||-++... ....+... ...
T Consensus 237 g~i~iwd~~~~~~~~~~~~~~~v----~~~~~~~~~~~~~~~--~d~~i~iwd~~~~~--~~~~~~~~~~~~~~~~h~~~ 308 (340)
T 4aow_A 237 GQAMLWDLNEGKHLYTLDGGDII----NALCFSPNRYWLCAA--TGPSIKIWDLEGKI--IVDELKQEVISTSSKAEPPQ 308 (340)
T ss_dssp CEEEEEETTTTEEEEEEECSSCE----EEEEECSSSSEEEEE--ETTEEEEEETTTTE--EEEEECCC-------CCCCC
T ss_pred CeEEEEEeccCceeeeecCCceE----EeeecCCCCceeecc--CCCEEEEEECCCCe--EEEeccccceeeeccCCCCC
Confidence 46888888765442 22222110 223333333333333 25689999887622 11122110 111
Q ss_pred eeeEEEeeCCcEEEEe-cCCeEEEEeCCCCc
Q 045569 302 RTPLGFWKKGAFFVHS-TNEQLLLYDPNTQE 331 (362)
Q Consensus 302 ~~~~~~~~~g~il~~~-~~~~~~~yd~~~~~ 331 (362)
...+++..+|+.++.. .++.+.+||+++++
T Consensus 309 v~~l~~s~dg~~l~sgs~Dg~v~iW~~~tGt 339 (340)
T 4aow_A 309 CTSLAWSADGQTLFAGYTDNLVRVWQVTIGT 339 (340)
T ss_dssp EEEEEECTTSSEEEEEETTSCEEEEEEEC--
T ss_pred EEEEEECCCCCEEEEEeCCCEEEEEeCCCcC
Confidence 2334555677777664 47789999998875
No 122
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=65.68 E-value=62 Score=27.47 Aligned_cols=71 Identities=8% Similarity=0.045 Sum_probs=42.0
Q ss_pred CCeEEEEEEcCCCCeEEEEEeeC--CeeEEEEEeCCCCCceeeEEEeeCCcEEEEec-CCeEEEEeCCCCcEEEee
Q 045569 264 NHSLCLLLSHNIENYYDIWVMKY--KCWIKQLSLGPLNGVRTPLGFWKKGAFFVHST-NEQLLLYDPNTQEMRDLG 336 (362)
Q Consensus 264 ~g~L~l~~~~~~~~~~~IW~l~~--~~W~~~~~i~~~~~~~~~~~~~~~g~il~~~~-~~~~~~yd~~~~~~~~v~ 336 (362)
+|++.+.+. ....+.||-++. ..+.....+.........+.+..++.+++... ++.+..||..++.++.+.
T Consensus 118 ~g~~las~s--~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~iW~~~~~~~~~~~ 191 (330)
T 2hes_X 118 DGYYLATCS--RDKSVWIWETDESGEEYECISVLQEHSQDVKHVIWHPSEALLASSSYDDTVRIWKDYDDDWECVA 191 (330)
T ss_dssp TSCEEEEEE--TTSCEEEEECCTTCCCCEEEEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEE
T ss_pred CCCEEEEEe--CCCEEEEEeccCCCCCeEEEEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCCeeEEE
Confidence 344444444 457899999954 45666665553222223344455676666544 677889998776554443
No 123
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=64.84 E-value=71 Score=27.85 Aligned_cols=94 Identities=6% Similarity=0.028 Sum_probs=50.3
Q ss_pred cEEEEEEcCCce--eeeecCCCCCCCCCcEEEEECCeEEEEEEcCCCCeEEEEEeeC-CeeEEEEEeC------CCCCce
Q 045569 232 KVILSFHLGNEV--FEEIQEPYIPESTPTILGIYNHSLCLLLSHNIENYYDIWVMKY-KCWIKQLSLG------PLNGVR 302 (362)
Q Consensus 232 ~~il~fD~~~e~--~~~i~~P~~~~~~~~~l~~~~g~L~l~~~~~~~~~~~IW~l~~-~~W~~~~~i~------~~~~~~ 302 (362)
..|..+|+.+.+ ...+..... .....+...+|++.+.+. ....+.||.+.+ ..-.....+. ......
T Consensus 313 g~i~vwd~~~~~~~~~~~~~~~~--~~v~~~~~~~~~~l~s~~--~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~v 388 (420)
T 3vl1_A 313 GMLAQWDLRSPECPVGEFLINEG--TPINNVYFAAGALFVSSG--FDTSIKLDIISDPESERPAIEFETPTFLVSNDDAV 388 (420)
T ss_dssp SEEEEEETTCTTSCSEEEEESTT--SCEEEEEEETTEEEEEET--TTEEEEEEEECCTTCCSCEECTTSCEEECCSSCCC
T ss_pred CeEEEEEcCCCcCchhhhhccCC--CCceEEEeCCCCEEEEec--CCccEEEEeccCCCCCccceeccCccEEccCCcce
Confidence 478899998753 233322111 111334455777554443 467999999987 1111111111 111112
Q ss_pred eeEEEeeCCc----EEEEecCCeEEEEeCCC
Q 045569 303 TPLGFWKKGA----FFVHSTNEQLLLYDPNT 329 (362)
Q Consensus 303 ~~~~~~~~g~----il~~~~~~~~~~yd~~~ 329 (362)
..+++..++. ++.....+.+..|+++.
T Consensus 389 ~~~~~s~~~~~~g~l~a~g~~g~~~~~~~~~ 419 (420)
T 3vl1_A 389 SQFCYVSDDESNGEVLEVGKNNFCALYNLSN 419 (420)
T ss_dssp CEEEEECCSSSSCEEEEEETTTEEEEEESCC
T ss_pred EEEEEccCCCCcceEEEEcCCceEEEEeccC
Confidence 3345555555 77777788899999875
No 124
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=64.28 E-value=65 Score=27.22 Aligned_cols=67 Identities=10% Similarity=0.049 Sum_probs=39.4
Q ss_pred CCeEEEEEEcCCCCeEEEEEeeC-CeeEEEEEeCCCCCceeeEEEeeCCcEEEEe-cCCeEEEEeCCCCcEEE
Q 045569 264 NHSLCLLLSHNIENYYDIWVMKY-KCWIKQLSLGPLNGVRTPLGFWKKGAFFVHS-TNEQLLLYDPNTQEMRD 334 (362)
Q Consensus 264 ~g~L~l~~~~~~~~~~~IW~l~~-~~W~~~~~i~~~~~~~~~~~~~~~g~il~~~-~~~~~~~yd~~~~~~~~ 334 (362)
+|++.+++. ....+.+|-++. .. ....+.........+.+..++..++.. .++.+..||.++++...
T Consensus 186 ~~~~l~~~~--~dg~i~i~d~~~~~~--~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~ 254 (369)
T 3zwl_B 186 KGKYIIAGH--KDGKISKYDVSNNYE--YVDSIDLHEKSISDMQFSPDLTYFITSSRDTNSFLVDVSTLQVLK 254 (369)
T ss_dssp GGCEEEEEE--TTSEEEEEETTTTTE--EEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEE
T ss_pred CCCEEEEEc--CCCEEEEEECCCCcE--eEEEEecCCCceeEEEECCCCCEEEEecCCceEEEEECCCCceee
Confidence 455544444 457899998876 33 233333222222344555567665554 47889999999876543
No 125
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=63.89 E-value=65 Score=27.02 Aligned_cols=182 Identities=10% Similarity=0.037 Sum_probs=90.4
Q ss_pred eEEEEeCCCcccccC-CCCCcCCCCcccceeeeeeeeecCCCCCeEEEEEEEEeecccccccCcce-EEEEECCCCC-ce
Q 045569 119 RITLWNRATKESRVL-PKCTTVFPKYTSIFCKCTGFGLDPMSTDYKLVLIFTLWNEKLDLLYEFSH-VAVYSLSTNS-WR 195 (362)
Q Consensus 119 ~~~V~NP~T~~~~~L-P~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~~~-~eVyss~~~~-W~ 195 (362)
.+.++|+.+++.... +.. .. ..++.++|..+ + ++... .. ... +.+|+...+. -.
T Consensus 109 ~i~v~d~~~~~~~~~~~~~-----~~------~~~~~~spdg~-~-l~~~~--~~--------~~~~i~~~~~~~~g~~~ 165 (331)
T 3u4y_A 109 NMQSYSFLKNKFISTIPIP-----YD------AVGIAISPNGN-G-LILID--RS--------SANTVRRFKIDADGVLF 165 (331)
T ss_dssp EEEEEETTTTEEEEEEECC-----TT------EEEEEECTTSS-C-EEEEE--ET--------TTTEEEEEEECTTCCEE
T ss_pred cEEEEECCCCCeEEEEECC-----CC------ccceEECCCCC-E-EEEEe--cC--------CCceEEEEEECCCCcEe
Confidence 799999998876542 221 11 35677777654 3 22221 11 123 6777766432 11
Q ss_pred ecc-c-CCC-ccccccCCcceEEECce-EEEEeeccCCCccEEEEEEcCCcee----eeecCCCCCCCCCcEEE-EECCe
Q 045569 196 YCD-C-FKS-NHYYMDGAFDSVYLDGV-CYWLSEFRDNDHKVILSFHLGNEVF----EEIQEPYIPESTPTILG-IYNHS 266 (362)
Q Consensus 196 ~~~-~-~~~-~~~~~~~~~~~v~~~G~-lywl~~~~~~~~~~il~fD~~~e~~----~~i~~P~~~~~~~~~l~-~~~g~ 266 (362)
... . ... ..+. .-.+.-+|. +|..... ...|..+|+.+.+. ..++..... ..+. .-+|+
T Consensus 166 ~~~~~~~~~~~~~~----~~~~spdg~~l~v~~~~----~~~v~v~d~~~~~~~~~~~~~~~~~~~----~~~~~spdg~ 233 (331)
T 3u4y_A 166 DTGQEFISGGTRPF----NITFTPDGNFAFVANLI----GNSIGILETQNPENITLLNAVGTNNLP----GTIVVSRDGS 233 (331)
T ss_dssp EEEEEEECSSSSEE----EEEECTTSSEEEEEETT----TTEEEEEECSSTTSCEEEEEEECSSCC----CCEEECTTSS
T ss_pred ecCCccccCCCCcc----ceEECCCCCEEEEEeCC----CCeEEEEECCCCcccceeeeccCCCCC----ceEEECCCCC
Confidence 110 0 000 0010 112233566 4444332 34799999987664 334332111 1232 23666
Q ss_pred EEEEEEcCCCCeEEEEEeeCCeeEEEEEeCCC----CCc---eeeEEEeeCCcEEE-Eec-CCeEEEEeCCCCcEEEee
Q 045569 267 LCLLLSHNIENYYDIWVMKYKCWIKQLSLGPL----NGV---RTPLGFWKKGAFFV-HST-NEQLLLYDPNTQEMRDLG 336 (362)
Q Consensus 267 L~l~~~~~~~~~~~IW~l~~~~W~~~~~i~~~----~~~---~~~~~~~~~g~il~-~~~-~~~~~~yd~~~~~~~~v~ 336 (362)
..++... ....+.+|-++.........+... ... ...+.+..+|+.++ ... ++.+.+||++++....+.
T Consensus 234 ~l~v~~~-~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~~~~~ 311 (331)
T 3u4y_A 234 TVYVLTE-STVDVFNFNQLSGTLSFVKSFGHGLLIDPRPLFGANQMALNKTETKLFISANISRELKVFTISGKVVGYVA 311 (331)
T ss_dssp EEEEECS-SEEEEEEEETTTTEEEEEEEEECCCCCCCGGGTTCCCEEECTTSSEEEEEETTTTEEEEEETTSCEEEECT
T ss_pred EEEEEEc-CCCEEEEEECCCCceeeecccccccccCCCCcccccceEECCCCCEEEEecCCCCcEEEEEecCCccccee
Confidence 3333332 345677777766444334443321 111 12356677777554 443 558999999988876654
No 126
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=62.92 E-value=31 Score=30.32 Aligned_cols=100 Identities=15% Similarity=0.097 Sum_probs=44.2
Q ss_pred ECceEEEEeeccCCCccEEEEEEcCCceeee-ecCCCCCCCCCcEEEEECCeEEEEEEcCCCCeEEEEEeeC--CeeEEE
Q 045569 216 LDGVCYWLSEFRDNDHKVILSFHLGNEVFEE-IQEPYIPESTPTILGIYNHSLCLLLSHNIENYYDIWVMKY--KCWIKQ 292 (362)
Q Consensus 216 ~~G~lywl~~~~~~~~~~il~fD~~~e~~~~-i~~P~~~~~~~~~l~~~~g~L~l~~~~~~~~~~~IW~l~~--~~W~~~ 292 (362)
.+|.+|.-...+ .+.++|..+++-.. +..+... .....++.+++... ...+..|-.+. ..|...
T Consensus 91 ~~~~v~~g~~dg-----~v~a~D~~tG~~~w~~~~~~~~-----~~~p~~~~v~~~~~---dg~v~a~d~~tG~~~W~~~ 157 (369)
T 2hz6_A 91 SDGILYMGKKQD-----IWYVIDLLTGEKQQTLSSAFAD-----SLSPSTSLLYLGRT---EYTITMYDTKTRELRWNAT 157 (369)
T ss_dssp ----CCCCEEEE-----EEEEECCC---------------------------EEEEEE---EEEEECCCSSSSSCCCEEE
T ss_pred cCCEEEEEeCCC-----EEEEEECCCCcEEEEecCCCcc-----cccccCCEEEEEec---CCEEEEEECCCCCEEEeEe
Confidence 567777544333 79999998654322 2222111 11113445554432 23555555544 558765
Q ss_pred EEeCCCCCceeeEEEee----CCcEEEEecCCeEEEEeCCCCcEEE
Q 045569 293 LSLGPLNGVRTPLGFWK----KGAFFVHSTNEQLLLYDPNTQEMRD 334 (362)
Q Consensus 293 ~~i~~~~~~~~~~~~~~----~g~il~~~~~~~~~~yd~~~~~~~~ 334 (362)
..-. ..|. +.. ++.+++...++.++++|.++++..+
T Consensus 158 ~~~~-----~~~~-~~~~~~~~~~v~~~~~dg~v~a~d~~tG~~~W 197 (369)
T 2hz6_A 158 YFDY-----AASL-PEDDVDYKMSHFVSNGDGLVVTVDSESGDVLW 197 (369)
T ss_dssp EEEE-----CCBC-CCCCTTCCCCEEEEETSCEEEEECTTTCCEEE
T ss_pred cccc-----cCcc-ccCCccccceEEEECCCCEEEEEECCCCcEEE
Confidence 3211 1111 111 2567776678899999999887654
No 127
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=62.62 E-value=70 Score=27.01 Aligned_cols=66 Identities=14% Similarity=0.010 Sum_probs=36.9
Q ss_pred CeEEEEEEcCCCCeEEEEEeeC-C-----------eeEEEEEeCCCCCceeeEEEeeC--CcEEEEec-CCeEEEEeCCC
Q 045569 265 HSLCLLLSHNIENYYDIWVMKY-K-----------CWIKQLSLGPLNGVRTPLGFWKK--GAFFVHST-NEQLLLYDPNT 329 (362)
Q Consensus 265 g~L~l~~~~~~~~~~~IW~l~~-~-----------~W~~~~~i~~~~~~~~~~~~~~~--g~il~~~~-~~~~~~yd~~~ 329 (362)
|.+.+.+. ....+.+|-+.. . .......+.........+.+..+ +.+++... ++.+..||+++
T Consensus 241 ~~~l~~~~--~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~l~~~~~dg~i~vwd~~~ 318 (366)
T 3k26_A 241 GDLILSKS--CENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQKMLALGNQVGKLYVWDLEV 318 (366)
T ss_dssp TTEEEEEC--SSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCCSSCCCCEECTTSSEEEEECTTSCEEEEECCS
T ss_pred CCEEEEEe--cCCEEEEEeCCCccccccccccCCcchheeccccccCCcEEEEEEcCCCCCcEEEEEecCCcEEEEECCC
Confidence 55544444 467999999876 1 11223333221111122333445 77766544 77899999998
Q ss_pred CcE
Q 045569 330 QEM 332 (362)
Q Consensus 330 ~~~ 332 (362)
++.
T Consensus 319 ~~~ 321 (366)
T 3k26_A 319 EDP 321 (366)
T ss_dssp SSG
T ss_pred CCC
Confidence 753
No 128
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=62.14 E-value=68 Score=26.67 Aligned_cols=65 Identities=18% Similarity=0.249 Sum_probs=43.2
Q ss_pred CeEEEEEEcCCCCeEEEEEeeC-------CeeEEEEEeCCCCCceeeEEEeeC--CcEEEE-ecCCeEEEEeCCCCc
Q 045569 265 HSLCLLLSHNIENYYDIWVMKY-------KCWIKQLSLGPLNGVRTPLGFWKK--GAFFVH-STNEQLLLYDPNTQE 331 (362)
Q Consensus 265 g~L~l~~~~~~~~~~~IW~l~~-------~~W~~~~~i~~~~~~~~~~~~~~~--g~il~~-~~~~~~~~yd~~~~~ 331 (362)
|.+.+.+. ....+.||-++. ..|.....+.........+.+..+ +..++. ..++.+..||+++++
T Consensus 71 ~~~l~s~~--~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~ 145 (351)
T 3f3f_A 71 GRIIASAS--YDKTVKLWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPS 145 (351)
T ss_dssp CSEEEEEE--TTSCEEEEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTT
T ss_pred CCEEEEEc--CCCeEEEEecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChH
Confidence 66666555 357899999986 356777777643333344555555 666555 457889999988765
No 129
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=62.06 E-value=77 Score=27.29 Aligned_cols=189 Identities=8% Similarity=-0.011 Sum_probs=86.2
Q ss_pred eeeeeEEEe-ecCceEEEEeCCCcccccCCCCCcCCCCcccceeeeeeeeecCCCCCeEEEEEEEEeecccccccCcceE
Q 045569 106 PYNGIFCIF-GNNNRITLWNRATKESRVLPKCTTVFPKYTSIFCKCTGFGLDPMSTDYKLVLIFTLWNEKLDLLYEFSHV 184 (362)
Q Consensus 106 s~~GLl~~~-~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~ 184 (362)
+.+|-.++. +.+..+.|||..+++....-.. +.. ....+.+.+....+ ++... . ...+
T Consensus 136 spdg~~l~sgs~d~~i~iwd~~~~~~~~~~~~----h~~-----~V~~~~~~~~~~~~-l~s~s----~-------D~~v 194 (344)
T 4gqb_B 136 LSSGTQAVSGSKDICIKVWDLAQQVVLSSYRA----HAA-----QVTCVAASPHKDSV-FLSCS----E-------DNRI 194 (344)
T ss_dssp CTTSSEEEEEETTSCEEEEETTTTEEEEEECC----CSS-----CEEEEEECSSCTTE-EEEEE----T-------TSCE
T ss_pred CCCCCEEEEEeCCCeEEEEECCCCcEEEEEcC----cCC-----ceEEEEecCCCCCc-eeeec----c-------cccc
Confidence 335544444 5566799999998876532211 111 14455565543332 22221 1 1258
Q ss_pred EEEECCCCCcee-cccCCCccccccCCcceEEE---CceEEEEeeccCCCccEEEEEEcCCcee-eeecCCCCCCCCCcE
Q 045569 185 AVYSLSTNSWRY-CDCFKSNHYYMDGAFDSVYL---DGVCYWLSEFRDNDHKVILSFHLGNEVF-EEIQEPYIPESTPTI 259 (362)
Q Consensus 185 eVyss~~~~W~~-~~~~~~~~~~~~~~~~~v~~---~G~lywl~~~~~~~~~~il~fD~~~e~~-~~i~~P~~~~~~~~~ 259 (362)
.+++.+++.-.. +........ ..++.+ ++.+...... ...|..+|+.+.+. ..+..... ....
T Consensus 195 ~iwd~~~~~~~~~~~~~~~~~~-----~~~~~~~p~~~~~l~sg~~----dg~v~~wd~~~~~~~~~~~~h~~---~v~~ 262 (344)
T 4gqb_B 195 LLWDTRCPKPASQIGCSAPGYL-----PTSLAWHPQQSEVFVFGDE----NGTVSLVDTKSTSCVLSSAVHSQ---CVTG 262 (344)
T ss_dssp EEEETTSSSCEEECC----CCC-----EEEEEECSSCTTEEEEEET----TSEEEEEESCC--CCEEEECCSS---CEEE
T ss_pred ccccccccceeeeeecceeecc-----ceeeeecCCCCcceEEecc----CCcEEEEECCCCcEEEEEcCCCC---CEEE
Confidence 889888764322 211110000 112222 2222222222 23677888876543 22221111 0023
Q ss_pred EEEE-CC-eEEEEEEcCCCCeEEEEEeeCCeeEEEEEeCCCCCceeeEEEeeCCc-EEEE-ecCCeEEEEeCCCCcE
Q 045569 260 LGIY-NH-SLCLLLSHNIENYYDIWVMKYKCWIKQLSLGPLNGVRTPLGFWKKGA-FFVH-STNEQLLLYDPNTQEM 332 (362)
Q Consensus 260 l~~~-~g-~L~l~~~~~~~~~~~IW~l~~~~W~~~~~i~~~~~~~~~~~~~~~g~-il~~-~~~~~~~~yd~~~~~~ 332 (362)
+... +| ++.+.+. ....+.||-++..+ ..+...-......+.+..+|. ++.. ..++.+..|++.++.+
T Consensus 263 v~fsp~g~~~lasgs--~D~~i~vwd~~~~~---~~~~~~H~~~V~~v~~sp~~~~llas~s~D~~v~~w~v~~~~~ 334 (344)
T 4gqb_B 263 LVFSPHSVPFLASLS--EDCSLAVLDSSLSE---LFRSQAHRDFVRDATWSPLNHSLLTTVGWDHQVVHHVVPTEPL 334 (344)
T ss_dssp EEECSSSSCCEEEEE--TTSCEEEECTTCCE---EEEECCCSSCEEEEEECSSSTTEEEEEETTSCEEEEECCC---
T ss_pred EEEccCCCeEEEEEe--CCCeEEEEECCCCc---EEEEcCCCCCEEEEEEeCCCCeEEEEEcCCCeEEEEECCCCCC
Confidence 3322 34 4444444 45789999765532 222321112223445555554 5544 3488899999988654
No 130
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=61.92 E-value=74 Score=27.03 Aligned_cols=205 Identities=10% Similarity=0.026 Sum_probs=97.0
Q ss_pred eeeeEEEe-ecCceEEEEeCCCc--ccccCCCCCcCCCCcccceeeeeeeeecCCCCCeEEEEEEEEeecccccccCcce
Q 045569 107 YNGIFCIF-GNNNRITLWNRATK--ESRVLPKCTTVFPKYTSIFCKCTGFGLDPMSTDYKLVLIFTLWNEKLDLLYEFSH 183 (362)
Q Consensus 107 ~~GLl~~~-~~~~~~~V~NP~T~--~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~~~ 183 (362)
.+|-|.+. ....++.++||..+ ....+......... ........++.+|+..+...|.-- +. ...
T Consensus 100 ~~g~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~-~~~~~~P~~ia~~~~~g~lyv~d~---~~--------~~~ 167 (329)
T 3fvz_A 100 TDGNYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSD-QNHFCQPTDVAVEPSTGAVFVSDG---YC--------NSR 167 (329)
T ss_dssp TTSCEEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCS-TTCCSSEEEEEECTTTCCEEEEEC---SS--------CCE
T ss_pred CCCCEEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCC-ccccCCCcEEEEeCCCCeEEEEeC---CC--------CCe
Confidence 45655555 34567889998765 23333221110000 000122578888885444333211 01 235
Q ss_pred EEEEECCCCCceecccCCCc---cccccCCcceEEE--C-ceEEEEeeccCCCccEEEEEEcCCcee-eeecCCCCCCCC
Q 045569 184 VAVYSLSTNSWRYCDCFKSN---HYYMDGAFDSVYL--D-GVCYWLSEFRDNDHKVILSFHLGNEVF-EEIQEPYIPEST 256 (362)
Q Consensus 184 ~eVyss~~~~W~~~~~~~~~---~~~~~~~~~~v~~--~-G~lywl~~~~~~~~~~il~fD~~~e~~-~~i~~P~~~~~~ 256 (362)
+.+|+.....-+.+...... .+.......++.+ + |.+|+.... ...|..||+.+.++ ..+..|.....
T Consensus 168 I~~~~~~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~----~~~I~~~~~~~G~~~~~~~~~~~~~~- 242 (329)
T 3fvz_A 168 IVQFSPSGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRE----NGRIQCFKTDTKEFVREIKHASFGRN- 242 (329)
T ss_dssp EEEECTTSCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETT----TTEEEEEETTTCCEEEEECCTTTTTC-
T ss_pred EEEEcCCCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECC----CCEEEEEECCCCcEEEEEeccccCCC-
Confidence 77777443322222211000 0000011445666 4 888887654 35899999985555 45555533211
Q ss_pred CcEEEEECCeEEEEEEc-----CCCCeEEEEEeeCCeeEEEEEeCCC-CCc--eeeEEEeeCCcEEEEec-CCeEEEEeC
Q 045569 257 PTILGIYNHSLCLLLSH-----NIENYYDIWVMKYKCWIKQLSLGPL-NGV--RTPLGFWKKGAFFVHST-NEQLLLYDP 327 (362)
Q Consensus 257 ~~~l~~~~g~L~l~~~~-----~~~~~~~IW~l~~~~W~~~~~i~~~-~~~--~~~~~~~~~g~il~~~~-~~~~~~yd~ 327 (362)
...+....|.++..... .....+.+|.++.... +..+... ... ..-+++..+|.+|+... .+++..|++
T Consensus 243 ~~~~~~~pg~~~~~~g~~~v~~~~~~~v~~~~~~~g~~--~~~~~~~~~~~~~p~~ia~~~dG~lyvad~~~~~I~~~~~ 320 (329)
T 3fvz_A 243 VFAISYIPGFLFAVNGKPYFGDQEPVQGFVMNFSSGEI--IDVFKPVRKHFDMPHDIVASEDGTVYIGDAHTNTVWKFTL 320 (329)
T ss_dssp EEEEEEETTEEEEEECCCCTTCSCCCCEEEEETTTCCE--EEEECCSSSCCSSEEEEEECTTSEEEEEESSSCCEEEEEE
T ss_pred cceeeecCCEEEEeCCCEEeccCCCcEEEEEEcCCCeE--EEEEcCCCCccCCeeEEEECCCCCEEEEECCCCEEEEEeC
Confidence 12233333433333221 1234677777665432 2334321 122 23355556677777654 556778876
Q ss_pred CCC
Q 045569 328 NTQ 330 (362)
Q Consensus 328 ~~~ 330 (362)
+.+
T Consensus 321 ~~~ 323 (329)
T 3fvz_A 321 TEK 323 (329)
T ss_dssp EEC
T ss_pred Ccc
Confidence 543
No 131
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=61.14 E-value=86 Score=28.25 Aligned_cols=113 Identities=12% Similarity=0.146 Sum_probs=62.2
Q ss_pred cceEEEC-----ceEEEEeeccCCCccEEEEEEcCCceeeeecCCCCCCCCCcEEE-EECCeEEEEEEcCCC-CeEEEEE
Q 045569 211 FDSVYLD-----GVCYWLSEFRDNDHKVILSFHLGNEVFEEIQEPYIPESTPTILG-IYNHSLCLLLSHNIE-NYYDIWV 283 (362)
Q Consensus 211 ~~~v~~~-----G~lywl~~~~~~~~~~il~fD~~~e~~~~i~~P~~~~~~~~~l~-~~~g~L~l~~~~~~~-~~~~IW~ 283 (362)
..++.++ |.|||.... ..|..+|+.+.+...+..+.. ....++ ..+|.|++....... ..-.++.
T Consensus 141 P~gvavd~~s~~g~Lyv~D~~-----~~I~~id~~~g~v~~~~~~~~---~P~giavd~dG~lyVad~~~~~~~~gv~~~ 212 (433)
T 4hw6_A 141 IWRMMFDPNSNYDDLYWVGQR-----DAFRHVDFVNQYVDIKTTNIG---QCADVNFTLNGDMVVVDDQSSDTNTGIYLF 212 (433)
T ss_dssp CCEEEECTTTTTCEEEEECBT-----SCEEEEETTTTEEEEECCCCS---CEEEEEECTTCCEEEEECCSCTTSEEEEEE
T ss_pred CceEEEccccCCCEEEEEeCC-----CCEEEEECCCCEEEEeecCCC---CccEEEECCCCCEEEEcCCCCcccceEEEE
Confidence 5567776 899998764 379999998888876633111 112333 346677776643211 2223333
Q ss_pred eeCCeeEEEEEeCCCCCceeeEEEee-CCcEEEEec-CCeEEEEeCCCCcE
Q 045569 284 MKYKCWIKQLSLGPLNGVRTPLGFWK-KGAFFVHST-NEQLLLYDPNTQEM 332 (362)
Q Consensus 284 l~~~~W~~~~~i~~~~~~~~~~~~~~-~g~il~~~~-~~~~~~yd~~~~~~ 332 (362)
..+..|.....+... ....-+++.. +|.||+... .+++..||+++++.
T Consensus 213 ~~~~~~~~~~~~~~~-~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~ 262 (433)
T 4hw6_A 213 TRASGFTERLSLCNA-RGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTL 262 (433)
T ss_dssp CGGGTTCCEEEEEEC-SSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCE
T ss_pred ECCCCeecccccccc-CCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeE
Confidence 333333321222211 1112244555 677887654 56799999987766
No 132
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=61.08 E-value=71 Score=26.57 Aligned_cols=196 Identities=11% Similarity=0.108 Sum_probs=95.4
Q ss_pred eeeeeEEEeecCceEEEEeCCCccccc-CCCCCcCCCCcccceeeeeeeeecCCCCCeEEEEEEEEeecccccccCcceE
Q 045569 106 PYNGIFCIFGNNNRITLWNRATKESRV-LPKCTTVFPKYTSIFCKCTGFGLDPMSTDYKLVLIFTLWNEKLDLLYEFSHV 184 (362)
Q Consensus 106 s~~GLl~~~~~~~~~~V~NP~T~~~~~-LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~ 184 (362)
+.+|-++....++.+.|||..+++... +.......... ....+.+.|.. .+ ++... . ...+
T Consensus 60 ~~~~~~l~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~-----~v~~~~~~~~~-~~-l~~~~---~--------d~~i 121 (337)
T 1gxr_A 60 SNPTRHVYTGGKGCVKVWDISHPGNKSPVSQLDCLNRDN-----YIRSCKLLPDG-CT-LIVGG---E--------ASTL 121 (337)
T ss_dssp CSSSSEEEEECBSEEEEEETTSTTCCSCSEEEECSCTTS-----BEEEEEECTTS-SE-EEEEE---S--------SSEE
T ss_pred ecCCcEEEEcCCCeEEEEECCCCCceeeeecccccCCCC-----cEEEEEEcCCC-CE-EEEEc---C--------CCcE
Confidence 344544444236679999988765322 11111001111 14566666643 22 22221 1 1358
Q ss_pred EEEECCCCCceecccCCCccccccCCcceEEE--CceEEEEeeccCCCccEEEEEEcCCceee-eecCCCCCCCCCcEEE
Q 045569 185 AVYSLSTNSWRYCDCFKSNHYYMDGAFDSVYL--DGVCYWLSEFRDNDHKVILSFHLGNEVFE-EIQEPYIPESTPTILG 261 (362)
Q Consensus 185 eVyss~~~~W~~~~~~~~~~~~~~~~~~~v~~--~G~lywl~~~~~~~~~~il~fD~~~e~~~-~i~~P~~~~~~~~~l~ 261 (362)
.+|+.+++.............. -..+.+ +|........ ...|..+|+.+.+.. .+..... ....+.
T Consensus 122 ~~~d~~~~~~~~~~~~~~~~~~----i~~~~~~~~~~~l~~~~~----dg~v~~~d~~~~~~~~~~~~~~~---~i~~~~ 190 (337)
T 1gxr_A 122 SIWDLAAPTPRIKAELTSSAPA----CYALAISPDSKVCFSCCS----DGNIAVWDLHNQTLVRQFQGHTD---GASCID 190 (337)
T ss_dssp EEEECCCC--EEEEEEECSSSC----EEEEEECTTSSEEEEEET----TSCEEEEETTTTEEEEEECCCSS---CEEEEE
T ss_pred EEEECCCCCcceeeecccCCCc----eEEEEECCCCCEEEEEeC----CCcEEEEeCCCCceeeeeecccC---ceEEEE
Confidence 9999988765433221111100 111222 4444333333 236888998876543 2332111 112333
Q ss_pred EE-CCeEEEEEEcCCCCeEEEEEeeCCeeEEEEEeCCCCCceeeEEEeeCCcEEEEe-cCCeEEEEeCCCCcEEEe
Q 045569 262 IY-NHSLCLLLSHNIENYYDIWVMKYKCWIKQLSLGPLNGVRTPLGFWKKGAFFVHS-TNEQLLLYDPNTQEMRDL 335 (362)
Q Consensus 262 ~~-~g~L~l~~~~~~~~~~~IW~l~~~~W~~~~~i~~~~~~~~~~~~~~~g~il~~~-~~~~~~~yd~~~~~~~~v 335 (362)
.. +|...+++. ....+.+|-++... ....+..... ...+.+..+++.++.. .++.+..||.++++...+
T Consensus 191 ~~~~~~~l~~~~--~dg~i~~~d~~~~~--~~~~~~~~~~-v~~~~~s~~~~~l~~~~~~~~i~~~~~~~~~~~~~ 261 (337)
T 1gxr_A 191 ISNDGTKLWTGG--LDNTVRSWDLREGR--QLQQHDFTSQ-IFSLGYCPTGEWLAVGMESSNVEVLHVNKPDKYQL 261 (337)
T ss_dssp ECTTSSEEEEEE--TTSEEEEEETTTTE--EEEEEECSSC-EEEEEECTTSSEEEEEETTSCEEEEETTSSCEEEE
T ss_pred ECCCCCEEEEEe--cCCcEEEEECCCCc--eEeeecCCCc-eEEEEECCCCCEEEEEcCCCcEEEEECCCCCeEEE
Confidence 22 565555554 46789999887732 2222332211 2334455566665554 477899999998776543
No 133
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=60.42 E-value=92 Score=27.62 Aligned_cols=193 Identities=6% Similarity=0.064 Sum_probs=89.9
Q ss_pred eEEEeecCceEEEEeCCCccc--ccC-CCCCcCCCCcccceeeeeeeeecCCCCCeEEEEEEEEeecccccccCcceEEE
Q 045569 110 IFCIFGNNNRITLWNRATKES--RVL-PKCTTVFPKYTSIFCKCTGFGLDPMSTDYKLVLIFTLWNEKLDLLYEFSHVAV 186 (362)
Q Consensus 110 Ll~~~~~~~~~~V~NP~T~~~--~~L-P~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~eV 186 (362)
+|+..+..+.+.||+..++.. ..+ +......+.. ....+.+.|..+.+-+.+. . ...+.+
T Consensus 196 ~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~-----~v~~v~~~p~~~~~l~s~~----~--------dg~i~i 258 (430)
T 2xyi_A 196 YLLSASDDHTICLWDINATPKEHRVIDAKNIFTGHTA-----VVEDVAWHLLHESLFGSVA----D--------DQKLMI 258 (430)
T ss_dssp EEEEECTTSCEEEEETTSCCBGGGEEECSEEECCCSS-----CEEEEEECSSCTTEEEEEE----T--------TSEEEE
T ss_pred eEEEEeCCCeEEEEeCCCCCCCCceeccceeecCCCC-----CEeeeEEeCCCCCEEEEEe----C--------CCeEEE
Confidence 555556666799999887321 111 1111111111 1456667664443322221 1 135899
Q ss_pred EECCCCC-ceecccCCCccccccCCcceEEEC--ce-EEEEeeccCCCccEEEEEEcCCce--eeeecCCCCCCCCC-cE
Q 045569 187 YSLSTNS-WRYCDCFKSNHYYMDGAFDSVYLD--GV-CYWLSEFRDNDHKVILSFHLGNEV--FEEIQEPYIPESTP-TI 259 (362)
Q Consensus 187 yss~~~~-W~~~~~~~~~~~~~~~~~~~v~~~--G~-lywl~~~~~~~~~~il~fD~~~e~--~~~i~~P~~~~~~~-~~ 259 (362)
|+.+++. .+.+.....+-. .-.++.++ |. ++..... ...|..+|+.+.. ...+... ... ..
T Consensus 259 ~d~~~~~~~~~~~~~~~~~~----~v~~i~~~p~~~~~l~tg~~----dg~v~vwd~~~~~~~~~~~~~h----~~~v~~ 326 (430)
T 2xyi_A 259 WDTRNNNTSKPSHTVDAHTA----EVNCLSFNPYSEFILATGSA----DKTVALWDLRNLKLKLHSFESH----KDEIFQ 326 (430)
T ss_dssp EETTCSCSSSCSEEEECCSS----CEEEEEECSSCTTEEEEEET----TSEEEEEETTCTTSCSEEEECC----SSCEEE
T ss_pred EECCCCCCCcceeEeecCCC----CeEEEEeCCCCCCEEEEEeC----CCeEEEEeCCCCCCCeEEeecC----CCCEEE
Confidence 9998752 221111100000 11223332 33 3333333 3478889987632 2222211 111 22
Q ss_pred EEEE-CC-eEEEEEEcCCCCeEEEEEeeC-Ce-----------eEEEEEeCCCCCceeeEEEeeCCc-EEEEe-cCCeEE
Q 045569 260 LGIY-NH-SLCLLLSHNIENYYDIWVMKY-KC-----------WIKQLSLGPLNGVRTPLGFWKKGA-FFVHS-TNEQLL 323 (362)
Q Consensus 260 l~~~-~g-~L~l~~~~~~~~~~~IW~l~~-~~-----------W~~~~~i~~~~~~~~~~~~~~~g~-il~~~-~~~~~~ 323 (362)
+... +| .+.+.+. ....+.||-+.. .. -..............-+.+..++. +++.. .++.+.
T Consensus 327 i~~sp~~~~~l~s~~--~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~s~dg~i~ 404 (430)
T 2xyi_A 327 VQWSPHNETILASSG--TDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWIICSVSEDNIMQ 404 (430)
T ss_dssp EEECSSCTTEEEEEE--TTSCCEEEEGGGTTCCCCHHHHHHCCTTEEEECCCCSSCEEEEEECSSSTTEEEEEETTSEEE
T ss_pred EEECCCCCCEEEEEe--CCCcEEEEeCCCCccccCccccccCCcceEEEcCCCCCCceEEEECCCCCCEEEEEECCCCEE
Confidence 3322 34 3555554 357899999876 11 123333322112223445555666 55543 477899
Q ss_pred EEeCCCCcEE
Q 045569 324 LYDPNTQEMR 333 (362)
Q Consensus 324 ~yd~~~~~~~ 333 (362)
+|++.++.+.
T Consensus 405 iw~~~~~~~~ 414 (430)
T 2xyi_A 405 VWQMAENVYN 414 (430)
T ss_dssp EEEECHHHHC
T ss_pred EeEccccccc
Confidence 9998765543
No 134
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=60.14 E-value=97 Score=27.83 Aligned_cols=114 Identities=13% Similarity=0.054 Sum_probs=64.3
Q ss_pred cceEEEC----ceEEEEeeccCCCccEEEEEEcCCceeeeecCCCCCCCCCcEEEE-ECCe-EEEEEEcCC-CCeEEEEE
Q 045569 211 FDSVYLD----GVCYWLSEFRDNDHKVILSFHLGNEVFEEIQEPYIPESTPTILGI-YNHS-LCLLLSHNI-ENYYDIWV 283 (362)
Q Consensus 211 ~~~v~~~----G~lywl~~~~~~~~~~il~fD~~~e~~~~i~~P~~~~~~~~~l~~-~~g~-L~l~~~~~~-~~~~~IW~ 283 (362)
..++.++ |.||+.... ..|..||+.+.+...+.-+ ......++. .+|+ |++...... .....+|.
T Consensus 139 P~~lavdp~~~g~Lyv~d~~-----~~I~~id~~~~~v~~~~~~---~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~ 210 (430)
T 3tc9_A 139 AVWLSFDPKNHNHLYLVGEQ-----HPTRLIDFEKEYVSTVYSG---LSKVRTICWTHEADSMIITNDQNNNDRPNNYIL 210 (430)
T ss_dssp CCEEEEETTEEEEEEEEEBT-----EEEEEEETTTTEEEEEECC---CSCEEEEEECTTSSEEEEEECCSCTTSEEEEEE
T ss_pred CCEEEECCCCCCeEEEEeCC-----CcEEEEECCCCEEEEEecC---CCCcceEEEeCCCCEEEEEeCCCCcccceEEEE
Confidence 3445554 889998764 3799999999877665321 111123433 3566 776665322 23345555
Q ss_pred eeCCeeEEEEEeCCCCCceeeEEEee-CCcEEEEec-CCeEEEEeCCCCcEE
Q 045569 284 MKYKCWIKQLSLGPLNGVRTPLGFWK-KGAFFVHST-NEQLLLYDPNTQEMR 333 (362)
Q Consensus 284 l~~~~W~~~~~i~~~~~~~~~~~~~~-~g~il~~~~-~~~~~~yd~~~~~~~ 333 (362)
..+..|.....+... ....-+++.. +|.||+... .+++..||++++...
T Consensus 211 ~~~g~~~~~~~l~~~-~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~ 261 (430)
T 3tc9_A 211 TRESGFKVITELTKG-QNCNGAETHPINGELYFNSWNAGQVFRYDFTTQETT 261 (430)
T ss_dssp EGGGTSCSEEEEEEC-SSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEE
T ss_pred eCCCceeeeeeeccC-CCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEE
Confidence 555445422222211 1123344555 678887754 678999999887663
No 135
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=60.08 E-value=1.2e+02 Score=29.00 Aligned_cols=190 Identities=13% Similarity=0.038 Sum_probs=96.0
Q ss_pred eEEEEeCCCcccc--cCCCCCcCCCCcccceeeeeeeeecCCCCCeEEEEEEEEeecccccccCcceEEEEECCCCCcee
Q 045569 119 RITLWNRATKESR--VLPKCTTVFPKYTSIFCKCTGFGLDPMSTDYKLVLIFTLWNEKLDLLYEFSHVAVYSLSTNSWRY 196 (362)
Q Consensus 119 ~~~V~NP~T~~~~--~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~eVyss~~~~W~~ 196 (362)
++++++.-|++.. .+-..+. .... ..+..+.+.. +|-++... ... ...++.+.+..++.|+.
T Consensus 203 ~v~~~~l~t~~~~~~lv~~~~~-~~~~------~~~~~~SpDG-~~l~~~~~---~~~-----~~~~l~~~~~~~~~~~~ 266 (695)
T 2bkl_A 203 TIRYHTLGTEPSKDTVVHERTG-DPTT------FLQSDLSRDG-KYLFVYIL---RGW-----SENDVYWKRPGEKDFRL 266 (695)
T ss_dssp EEEEEETTSCGGGCEEEECCCC-CTTC------EEEEEECTTS-CCEEEEEE---ETT-----TEEEEEEECTTCSSCEE
T ss_pred EEEEEECCCCchhceEEEecCC-CCEE------EEEEEECCCC-CEEEEEEe---CCC-----CceEEEEEcCCCCceEE
Confidence 4889998887632 2211111 0111 3455666644 45444332 110 12345566666677877
Q ss_pred cccCCCccccccCCcceEEECceEEEEeeccCCCccEEEEEEcCCce---eeeecCCCCCCCCCcEEEEECCeEEEEEEc
Q 045569 197 CDCFKSNHYYMDGAFDSVYLDGVCYWLSEFRDNDHKVILSFHLGNEV---FEEIQEPYIPESTPTILGIYNHSLCLLLSH 273 (362)
Q Consensus 197 ~~~~~~~~~~~~~~~~~v~~~G~lywl~~~~~~~~~~il~fD~~~e~---~~~i~~P~~~~~~~~~l~~~~g~L~l~~~~ 273 (362)
+..... . ....+..+|.+|..+... .....|..+|+.+.. |+.+-.+... ..-..+...+|.|.+....
T Consensus 267 l~~~~~--~----~~~~~~~~g~l~~~s~~~-~~~~~l~~~d~~~~~~~~~~~l~~~~~~-~~l~~~~~~~~~lv~~~~~ 338 (695)
T 2bkl_A 267 LVKGVG--A----KYEVHAWKDRFYVLTDEG-APRQRVFEVDPAKPARASWKEIVPEDSS-ASLLSVSIVGGHLSLEYLK 338 (695)
T ss_dssp EEECSS--C----CEEEEEETTEEEEEECTT-CTTCEEEEEBTTBCSGGGCEEEECCCSS-CEEEEEEEETTEEEEEEEE
T ss_pred eecCCC--c----eEEEEecCCcEEEEECCC-CCCCEEEEEeCCCCCccCCeEEecCCCC-CeEEEEEEECCEEEEEEEE
Confidence 654321 1 123344577766655422 235689999997654 6655332211 1002234448888776653
Q ss_pred CCCCeEEEEEeeC-CeeEEEEEeCCC-CCceeeEEEeeCC-cEEEEec----CCeEEEEeCCCCcEEEee
Q 045569 274 NIENYYDIWVMKY-KCWIKQLSLGPL-NGVRTPLGFWKKG-AFFVHST----NEQLLLYDPNTQEMRDLG 336 (362)
Q Consensus 274 ~~~~~~~IW~l~~-~~W~~~~~i~~~-~~~~~~~~~~~~g-~il~~~~----~~~~~~yd~~~~~~~~v~ 336 (362)
.....||+++- +. ....+... ......+.+..++ .+++... ...++.||+++++.+.+.
T Consensus 339 --dg~~~l~~~~~~g~--~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~v~~~d~~~g~~~~l~ 404 (695)
T 2bkl_A 339 --DATSEVRVATLKGK--PVRTVQLPGVGAASNLMGLEDLDDAYYVFTSFTTPRQIYKTSVSTGKSELWA 404 (695)
T ss_dssp --TTEEEEEEEETTCC--EEEECCCSSSSEECCCBSCTTCSEEEEEEEETTEEEEEEEEETTTCCEEEEE
T ss_pred --CCEEEEEEEeCCCC--eeEEecCCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCCcEEEEe
Confidence 45778888873 22 23344422 1111112222344 4544432 356999999988765543
No 136
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=59.70 E-value=73 Score=26.28 Aligned_cols=67 Identities=12% Similarity=0.203 Sum_probs=37.4
Q ss_pred eeeeeEEEeecCceEEEEeCCCcccccCCCCCcCCCCcccceeeeeeeeecCCCCCeEEEEEEEEeecccccccCcceEE
Q 045569 106 PYNGIFCIFGNNNRITLWNRATKESRVLPKCTTVFPKYTSIFCKCTGFGLDPMSTDYKLVLIFTLWNEKLDLLYEFSHVA 185 (362)
Q Consensus 106 s~~GLl~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~e 185 (362)
|.+|+|.... ++.+.|||..|++...+-.... +.. ....+.+.+.. ++-+.+- . ...+.
T Consensus 34 S~~~~lAvg~-D~tV~iWd~~tg~~~~~~~~~~--~~~-----~V~~v~~~~~~-~~l~sgs-----~-------Dg~v~ 92 (318)
T 4ggc_A 34 SSGNVLAVAL-DNSVYLWSASSGDILQLLQMEQ--PGE-----YISSVAWIKEG-NYLAVGT-----S-------SAEVQ 92 (318)
T ss_dssp CTTSEEEEEE-TTEEEEEETTTCCEEEEEECCS--TTC-----CEEEEEECTTS-SEEEEEE-----T-------TSEEE
T ss_pred CCCCEEEEEe-CCEEEEEECCCCCEEEEEEecC--CCC-----eEEEEEECCCC-CEEEEEE-----C-------CCcEE
Confidence 5677665443 4469999999998765322221 111 14566666643 3332221 1 13588
Q ss_pred EEECCCCC
Q 045569 186 VYSLSTNS 193 (362)
Q Consensus 186 Vyss~~~~ 193 (362)
+++.+++.
T Consensus 93 iw~~~~~~ 100 (318)
T 4ggc_A 93 LWDVQQQK 100 (318)
T ss_dssp EEETTTTE
T ss_pred EeecCCce
Confidence 88887763
No 137
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=59.19 E-value=84 Score=26.82 Aligned_cols=191 Identities=10% Similarity=0.044 Sum_probs=91.0
Q ss_pred EEEEeCCCcccccCCCCCcCCCCcccceeeeeeeeecCCCCCeEEEEEEEEeecccccccCcceEEEEECCC--CCceec
Q 045569 120 ITLWNRATKESRVLPKCTTVFPKYTSIFCKCTGFGLDPMSTDYKLVLIFTLWNEKLDLLYEFSHVAVYSLST--NSWRYC 197 (362)
Q Consensus 120 ~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~eVyss~~--~~W~~~ 197 (362)
++.+|+.|++...+..... .. ..++.++|..+ .++... ..+. ....+.+|+... +..+.+
T Consensus 31 ~~~~d~~~g~~~~~~~~~~---~~------p~~l~~spdg~--~l~~~~--~~~~-----~~~~v~~~~~~~~~g~~~~~ 92 (361)
T 3scy_A 31 TFRFNEETGESLPLSDAEV---AN------PSYLIPSADGK--FVYSVN--EFSK-----DQAAVSAFAFDKEKGTLHLL 92 (361)
T ss_dssp EEEEETTTCCEEEEEEEEC---SC------CCSEEECTTSS--EEEEEE--CCSS-----TTCEEEEEEEETTTTEEEEE
T ss_pred EEEEeCCCCCEEEeecccC---CC------CceEEECCCCC--EEEEEE--ccCC-----CCCcEEEEEEeCCCCcEEEe
Confidence 4445888887765543311 11 34556666432 222222 1100 113466666544 666655
Q ss_pred ccCCCccccccCCcceEEECceEEEEeeccCCCccEEEEEEcCCc-eeeee----cC----CC--CCCCCCcE-EEE-EC
Q 045569 198 DCFKSNHYYMDGAFDSVYLDGVCYWLSEFRDNDHKVILSFHLGNE-VFEEI----QE----PY--IPESTPTI-LGI-YN 264 (362)
Q Consensus 198 ~~~~~~~~~~~~~~~~v~~~G~lywl~~~~~~~~~~il~fD~~~e-~~~~i----~~----P~--~~~~~~~~-l~~-~~ 264 (362)
........ ....+.++|..-+..... ...|..+|+.+. ....+ .. |. ........ +.. -+
T Consensus 93 ~~~~~~~~----~p~~~~~dg~~l~~~~~~---~~~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spd 165 (361)
T 3scy_A 93 NTQKTMGA----DPCYLTTNGKNIVTANYS---GGSITVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPD 165 (361)
T ss_dssp EEEECSSS----CEEEEEECSSEEEEEETT---TTEEEEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTT
T ss_pred eEeccCCC----CcEEEEECCCEEEEEECC---CCEEEEEEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCC
Confidence 43221110 122333477654444432 347888888643 22211 11 11 11111112 332 36
Q ss_pred CeEEEEEEcCCCCeEEEEEeeCCe-------eEEE---EEeCCC-CCceeeEEEeeCCcEE-EEe-cCCeEEEEeCCCCc
Q 045569 265 HSLCLLLSHNIENYYDIWVMKYKC-------WIKQ---LSLGPL-NGVRTPLGFWKKGAFF-VHS-TNEQLLLYDPNTQE 331 (362)
Q Consensus 265 g~L~l~~~~~~~~~~~IW~l~~~~-------W~~~---~~i~~~-~~~~~~~~~~~~g~il-~~~-~~~~~~~yd~~~~~ 331 (362)
|+..++... ....+.+|.++... .... ..+... ..-...+.+..+|+.+ +.. .++.+.+||+++++
T Consensus 166 g~~l~~~~~-~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~ 244 (361)
T 3scy_A 166 GKYLLADDL-GTDQIHKFNINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYADGM 244 (361)
T ss_dssp SSEEEEEET-TTTEEEEEEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTCEEEEEEEETTE
T ss_pred CCEEEEEeC-CCCEEEEEEEcCCCCcccccceeecccccceecCCCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecCCc
Confidence 763333332 46789999998722 3222 122211 1123445666778754 444 36789999998887
Q ss_pred EEEee
Q 045569 332 MRDLG 336 (362)
Q Consensus 332 ~~~v~ 336 (362)
++.+.
T Consensus 245 ~~~~~ 249 (361)
T 3scy_A 245 LDEIQ 249 (361)
T ss_dssp EEEEE
T ss_pred eEEeE
Confidence 76544
No 138
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=59.16 E-value=87 Score=26.94 Aligned_cols=96 Identities=6% Similarity=-0.069 Sum_probs=49.8
Q ss_pred cEEEEEEcCCceeeeecCCCCCC---CCC-cEEEEE-CCeEEEEEEcCCCCeEEEEEeeCCeeEEEEEeCCCCCceeeEE
Q 045569 232 KVILSFHLGNEVFEEIQEPYIPE---STP-TILGIY-NHSLCLLLSHNIENYYDIWVMKYKCWIKQLSLGPLNGVRTPLG 306 (362)
Q Consensus 232 ~~il~fD~~~e~~~~i~~P~~~~---~~~-~~l~~~-~g~L~l~~~~~~~~~~~IW~l~~~~W~~~~~i~~~~~~~~~~~ 306 (362)
..|..+|+.+.+-.......... ... ...... .+.+.+... ...+.||-+... .....+.........+.
T Consensus 267 g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~i~v~d~~~~--~~~~~~~~~~~~v~~~~ 341 (408)
T 4a11_B 267 NRMRLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPY---GSTIAVYTVYSG--EQITMLKGHYKTVDCCV 341 (408)
T ss_dssp SCEEEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEE---TTEEEEEETTTC--CEEEEECCCSSCEEEEE
T ss_pred CeEEEEECCCCccceeccccccccccccceeEEecCCCceEEEEec---CCEEEEEECcCC--cceeeeccCCCeEEEEE
Confidence 36888998876543221111100 000 122222 333444332 468999988663 23444543222234455
Q ss_pred EeeCCcEEEEe-cCCeEEEEeCCCCcE
Q 045569 307 FWKKGAFFVHS-TNEQLLLYDPNTQEM 332 (362)
Q Consensus 307 ~~~~g~il~~~-~~~~~~~yd~~~~~~ 332 (362)
+..++.+++.. .++.+..||+++.+.
T Consensus 342 ~s~~~~~l~s~~~dg~i~iw~~~~~~~ 368 (408)
T 4a11_B 342 FQSNFQELYSGSRDCNILAWVPSLYEP 368 (408)
T ss_dssp EETTTTEEEEEETTSCEEEEEECC---
T ss_pred EcCCCCEEEEECCCCeEEEEeCCCCCc
Confidence 66677776655 478899999998764
No 139
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=59.01 E-value=70 Score=25.83 Aligned_cols=184 Identities=14% Similarity=0.084 Sum_probs=91.3
Q ss_pred CceEEEEeCCCcccccCCCCCcCCCCcccceeeeeeeeecCCCCCeEEEEEEEEeecccccccCcceEEEEECCC-CCce
Q 045569 117 NNRITLWNRATKESRVLPKCTTVFPKYTSIFCKCTGFGLDPMSTDYKLVLIFTLWNEKLDLLYEFSHVAVYSLST-NSWR 195 (362)
Q Consensus 117 ~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~eVyss~~-~~W~ 195 (362)
...++++|+.+++...+..... . ...+.+.|..+ +-++ .. ...+.+++..+ +...
T Consensus 21 ~~~i~~~d~~~~~~~~~~~~~~----~------v~~~~~spdg~-~l~~-~~------------~~~i~~~d~~~~~~~~ 76 (297)
T 2ojh_A 21 RSSIEIFNIRTRKMRVVWQTPE----L------FEAPNWSPDGK-YLLL-NS------------EGLLYRLSLAGDPSPE 76 (297)
T ss_dssp CEEEEEEETTTTEEEEEEEESS----C------CEEEEECTTSS-EEEE-EE------------TTEEEEEESSSCCSCE
T ss_pred ceeEEEEeCCCCceeeeccCCc----c------eEeeEECCCCC-EEEE-Ec------------CCeEEEEeCCCCCCce
Confidence 4569999999988765543211 1 34566666543 3222 11 12588999988 7666
Q ss_pred ecccCCCccccccCCcceEEECceEEEEeeccCCCccEEEEEEcCCceeeeecCCCCCCCCCcEEEE-ECCe-EEEEEEc
Q 045569 196 YCDCFKSNHYYMDGAFDSVYLDGVCYWLSEFRDNDHKVILSFHLGNEVFEEIQEPYIPESTPTILGI-YNHS-LCLLLSH 273 (362)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~v~~~G~lywl~~~~~~~~~~il~fD~~~e~~~~i~~P~~~~~~~~~l~~-~~g~-L~l~~~~ 273 (362)
.+......... ......-+|...............|..+|+.+.+...+..... ...+.. -+|+ |++...
T Consensus 77 ~~~~~~~~~~~---~~~~~spdg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~----~~~~~~spdg~~l~~~~~- 148 (297)
T 2ojh_A 77 KVDTGFATICN---NDHGISPDGALYAISDKVEFGKSAIYLLPSTGGTPRLMTKNLP----SYWHGWSPDGKSFTYCGI- 148 (297)
T ss_dssp ECCCTTCCCBC---SCCEECTTSSEEEEEECTTTSSCEEEEEETTCCCCEECCSSSS----EEEEEECTTSSEEEEEEE-
T ss_pred Eeccccccccc---cceEECCCCCEEEEEEeCCCCcceEEEEECCCCceEEeecCCC----ccceEECCCCCEEEEEEC-
Confidence 54322110110 0112223554333333111124578888887776555433221 112222 2555 443443
Q ss_pred CCCCeEEEEEeeC--CeeEEEEEeCCCCCceeeEEEeeCCcEEE-Eec---CCeEEEEeCCCCcEEEee
Q 045569 274 NIENYYDIWVMKY--KCWIKQLSLGPLNGVRTPLGFWKKGAFFV-HST---NEQLLLYDPNTQEMRDLG 336 (362)
Q Consensus 274 ~~~~~~~IW~l~~--~~W~~~~~i~~~~~~~~~~~~~~~g~il~-~~~---~~~~~~yd~~~~~~~~v~ 336 (362)
....+.||.++. ... ..+.........+.+..+|+.++ ... ...++.++..++..+.+.
T Consensus 149 -~~~~~~l~~~~~~~~~~---~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~~~~~~~~ 213 (297)
T 2ojh_A 149 -RDQVFDIYSMDIDSGVE---TRLTHGEGRNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDGSSVERIT 213 (297)
T ss_dssp -ETTEEEEEEEETTTCCE---EECCCSSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCEEECC
T ss_pred -CCCceEEEEEECCCCcc---eEcccCCCccccceECCCCCEEEEEecCCCCccEEEECCCCCCcEEEe
Confidence 346789999865 222 22222122223344445666444 332 245677776776665543
No 140
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=58.39 E-value=92 Score=26.98 Aligned_cols=187 Identities=7% Similarity=-0.062 Sum_probs=92.3
Q ss_pred eeeEEEeecCceEEEEeCCCcccccCCCCCcCCCCcccceeeeeeeeecCCCCCeEEEEEEEEeecccccccCcceEEEE
Q 045569 108 NGIFCIFGNNNRITLWNRATKESRVLPKCTTVFPKYTSIFCKCTGFGLDPMSTDYKLVLIFTLWNEKLDLLYEFSHVAVY 187 (362)
Q Consensus 108 ~GLl~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~eVy 187 (362)
.+.|++.... .+...++.+.+...+-.. ... ..|+.+|+..+...+.-+ . ...+..+
T Consensus 44 ~~~ll~~~~~-~I~~i~~~g~~~~~~~~~----~~~------~~~l~~d~~~~~ly~~D~----~--------~~~I~r~ 100 (349)
T 3v64_C 44 EPVLLFANRI-DIRQVLPHRSEYTLLLNN----LEN------AIALDFHHRRELVFWSDV----T--------LDRILRA 100 (349)
T ss_dssp CCEEEEECBS-CEEEECTTSCCEEEEECS----CSC------EEEEEEETTTTEEEEEET----T--------TTEEEEE
T ss_pred CceeEeeccc-ceEEEeCCCCeeEEeecC----CCc------eEEEEEeccccEEEEEec----c--------CCceEEE
Confidence 4455555332 266667666554332211 111 578888876553322211 1 1246677
Q ss_pred ECCCCCceecccCCCccccccCCcceEEE---CceEEEEeeccCCCccEEEEEEcCCceeeeecCCCCCCCCCcEEEEE-
Q 045569 188 SLSTNSWRYCDCFKSNHYYMDGAFDSVYL---DGVCYWLSEFRDNDHKVILSFHLGNEVFEEIQEPYIPESTPTILGIY- 263 (362)
Q Consensus 188 ss~~~~W~~~~~~~~~~~~~~~~~~~v~~---~G~lywl~~~~~~~~~~il~fD~~~e~~~~i~~P~~~~~~~~~l~~~- 263 (362)
+..++.-+.+.... .. ...++.+ +|.+||..... ..|.++|+....-..+. ...... ...++.-
T Consensus 101 ~~~g~~~~~~~~~~--~~----~p~glavd~~~g~ly~~d~~~----~~I~~~~~dG~~~~~l~-~~~l~~-P~~iavdp 168 (349)
T 3v64_C 101 NLNGSNVEEVVSTG--LE----SPGGLAVDWVHDKLYWTDSGT----SRIEVANLDGAHRKVLL-WQSLEK-PRAIALHP 168 (349)
T ss_dssp ETTSCSCEEEECSS--CS----CCCEEEEETTTTEEEEEETTT----TEEEEEETTSCSCEEEE-CTTCSC-EEEEEEET
T ss_pred ecCCCCceEEEeCC--CC----CccEEEEecCCCeEEEEcCCC----CeEEEEcCCCCceEEEE-eCCCCC-cceEEEec
Confidence 77665444332111 11 1234444 68999997653 47999998765433332 111111 1344443
Q ss_pred -CCeEEEEEEcCCCCeEEEEEeeCCeeEEEEEeCCCCCceee--EEEe-eCCcEEEEec-CCeEEEEeCCCCcEEE
Q 045569 264 -NHSLCLLLSHNIENYYDIWVMKYKCWIKQLSLGPLNGVRTP--LGFW-KKGAFFVHST-NEQLLLYDPNTQEMRD 334 (362)
Q Consensus 264 -~g~L~l~~~~~~~~~~~IW~l~~~~W~~~~~i~~~~~~~~~--~~~~-~~g~il~~~~-~~~~~~yd~~~~~~~~ 334 (362)
+|.|++.... ....+...-++.. -. ..+- ...+..| +++. .++.||+... ..++..+|++.+..+.
T Consensus 169 ~~g~ly~td~~-~~~~I~r~~~dG~-~~--~~~~-~~~~~~PnGla~d~~~~~lY~aD~~~~~I~~~~~dG~~~~~ 239 (349)
T 3v64_C 169 MEGTIYWTDWG-NTPRIEASSMDGS-GR--RIIA-DTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKA 239 (349)
T ss_dssp TTTEEEEEECS-SSCEEEEEETTSC-SC--EESC-CSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEE
T ss_pred CcCeEEEeccC-CCCEEEEEeCCCC-Cc--EEEE-ECCCCCcceEEEeCCCCEEEEEECCCCEEEEEeCCCCceEE
Confidence 6778776642 1133333333331 11 1111 1223344 3444 3566777654 5678899987655443
No 141
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=58.14 E-value=87 Score=26.61 Aligned_cols=190 Identities=11% Similarity=-0.040 Sum_probs=92.6
Q ss_pred eeeeeEEEee-cCceEEEEeCCC----ccccc-CCCCCcCCCCcccceeeeeeeeecCCCCCeEEEEEEEEeeccccccc
Q 045569 106 PYNGIFCIFG-NNNRITLWNRAT----KESRV-LPKCTTVFPKYTSIFCKCTGFGLDPMSTDYKLVLIFTLWNEKLDLLY 179 (362)
Q Consensus 106 s~~GLl~~~~-~~~~~~V~NP~T----~~~~~-LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~ 179 (362)
..+|.|.+.+ ...+++..++.+ ..... ++.. ... ..|+++|+..+.-.+ .- ..
T Consensus 39 ~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~----~~~------p~glavd~~~~~ly~--~d--~~------- 97 (316)
T 1ijq_A 39 VASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRD----IQA------PDGLAVDWIHSNIYW--TD--SV------- 97 (316)
T ss_dssp TTTTEEEEEETTTTEEEEEEC--------CEEEECSS----CSC------CCEEEEETTTTEEEE--EE--TT-------
T ss_pred eCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCC----CCC------cCEEEEeecCCeEEE--EE--CC-------
Confidence 3456676663 345688888876 22221 2211 111 357777765443222 21 00
Q ss_pred CcceEEEEECCCCCceecccCCCccccccCCcceEEE---CceEEEEeeccCCCccEEEEEEcCCceeeeecCCCCCCCC
Q 045569 180 EFSHVAVYSLSTNSWRYCDCFKSNHYYMDGAFDSVYL---DGVCYWLSEFRDNDHKVILSFHLGNEVFEEIQEPYIPEST 256 (362)
Q Consensus 180 ~~~~~eVyss~~~~W~~~~~~~~~~~~~~~~~~~v~~---~G~lywl~~~~~~~~~~il~fD~~~e~~~~i~~P~~~~~~ 256 (362)
...+++++.....=+.+... ... ...++.+ +|.+||..... ...|..+|+....-..+-. .... .
T Consensus 98 -~~~I~~~~~~g~~~~~~~~~--~~~----~P~~iavdp~~g~ly~~d~~~---~~~I~~~~~dG~~~~~~~~-~~~~-~ 165 (316)
T 1ijq_A 98 -LGTVSVADTKGVKRKTLFRE--NGS----KPRAIVVDPVHGFMYWTDWGT---PAKIKKGGLNGVDIYSLVT-ENIQ-W 165 (316)
T ss_dssp -TTEEEEEETTSSSEEEEEEC--TTC----CEEEEEEETTTTEEEEEECSS---SCEEEEEETTSCCEEEEEC-SSCS-C
T ss_pred -CCEEEEEeCCCCceEEEEEC--CCC----CcceEEeCCCCCEEEEEccCC---CCeEEEEcCCCCCeEEEEE-CCCC-C
Confidence 23577888765432222111 111 1334444 68999987542 2479999987654433311 1111 1
Q ss_pred CcEEEEE--CCeEEEEEEcCCCCeEEEEEeeCCeeEEEEEeCCCCCceeeEEEe-eCCcEEEEec-CCeEEEEeCCCCcE
Q 045569 257 PTILGIY--NHSLCLLLSHNIENYYDIWVMKYKCWIKQLSLGPLNGVRTPLGFW-KKGAFFVHST-NEQLLLYDPNTQEM 332 (362)
Q Consensus 257 ~~~l~~~--~g~L~l~~~~~~~~~~~IW~l~~~~W~~~~~i~~~~~~~~~~~~~-~~g~il~~~~-~~~~~~yd~~~~~~ 332 (362)
...|+.- +++|+++.. ....+...-++...=....... .....|.++. .++.+|+... .+++..+|+.+++.
T Consensus 166 P~gla~d~~~~~lY~~D~--~~~~I~~~d~dg~~~~~~~~~~--~~~~~P~giav~~~~ly~~d~~~~~V~~~~~~~g~~ 241 (316)
T 1ijq_A 166 PNGITLDLLSGRLYWVDS--KLHSISSIDVNGGNRKTILEDE--KRLAHPFSLAVFEDKVFWTDIINEAIFSANRLTGSD 241 (316)
T ss_dssp EEEEEEETTTTEEEEEET--TTTEEEEEETTSCSCEEEEECT--TTTSSEEEEEEETTEEEEEETTTTEEEEEETTTCCC
T ss_pred ceEEEEeccCCEEEEEEC--CCCeEEEEecCCCceEEEeecC--CccCCcEEEEEECCEEEEEECCCCeEEEEeCCCCcc
Confidence 1244443 678887765 3345544444431111111111 1233454433 3467777654 57899999876653
No 142
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=57.98 E-value=1e+02 Score=29.03 Aligned_cols=114 Identities=15% Similarity=0.154 Sum_probs=60.0
Q ss_pred cceEEECceEEEEeeccCCCccEEEEEEcCC--ceeeee-cCCCCCC----CCCcEEEEECCeEEEEEEcCCCCeEEEEE
Q 045569 211 FDSVYLDGVCYWLSEFRDNDHKVILSFHLGN--EVFEEI-QEPYIPE----STPTILGIYNHSLCLLLSHNIENYYDIWV 283 (362)
Q Consensus 211 ~~~v~~~G~lywl~~~~~~~~~~il~fD~~~--e~~~~i-~~P~~~~----~~~~~l~~~~g~L~l~~~~~~~~~~~IW~ 283 (362)
..++..+|.+|...... .+.++|..+ +.|+.- ..|.... .....++..+|++++.... .. |..
T Consensus 62 ~~P~v~~g~vyv~~~~~-----~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~g~a~~~~~v~~~t~d---g~--l~A 131 (582)
T 1flg_A 62 SQAIVSDGVIYVTASYS-----RLFALDAKTGKRLWTYNHRLPDDIRPCCDVVNRGAAIYGDKVFFGTLD---AS--VVA 131 (582)
T ss_dssp CCCEEETTEEEEEETTT-----EEEEEESSSCCEEEEEECCCCTTCCCSSCSCCCCCEEETTEEEEEETT---TE--EEE
T ss_pred eccEEECCEEEEEcCCC-----CEEEEECCCCcEEEEEcCCCCcccccccccCCCccEEECCEEEEEeCC---CE--EEE
Confidence 45688999999987643 499999865 456542 2332110 0001234567777665432 22 333
Q ss_pred ee--C--CeeEEEEEeCCC--CCceeeEEEee--CC--cEEEEec------CCeEEEEeCCCCcEEE
Q 045569 284 MK--Y--KCWIKQLSLGPL--NGVRTPLGFWK--KG--AFFVHST------NEQLLLYDPNTQEMRD 334 (362)
Q Consensus 284 l~--~--~~W~~~~~i~~~--~~~~~~~~~~~--~g--~il~~~~------~~~~~~yd~~~~~~~~ 334 (362)
++ . ..|.....-... .....|+.... +| .|++... ++.++.||.+|++..+
T Consensus 132 lD~~TG~~~W~~~~~~~~~~~~~~~sP~v~~~~~~G~~~v~vg~~~~e~~~~g~v~alD~~tG~~~W 198 (582)
T 1flg_A 132 LNKNTGKVVWKKKFADHGAGYTMTGAPTIVKDGKTGKVLLIHGSSGDEFGVVGRLFARDPDTGEEIW 198 (582)
T ss_dssp EESSSCCEEEEEECSCGGGTCBCCSCCEEEECTTTCCEEEEECCBCGGGCCBCEEEEECTTTCCEEE
T ss_pred EECCCCCEEeeecCCCCCcCcccccCCEEeCCCcCCcEEEEEeccccccCCCCEEEEEECCCCCEEe
Confidence 43 2 456653211000 01134543321 12 3444321 4689999999988765
No 143
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=57.49 E-value=95 Score=26.91 Aligned_cols=71 Identities=13% Similarity=0.173 Sum_probs=43.9
Q ss_pred CCeEEEEEE-cC-----CCCeEEEEEeeCCeeEEEEEeCCCCCceeeEEEeeCCcEEEEecCCeEEEEeCCCCcEEEee
Q 045569 264 NHSLCLLLS-HN-----IENYYDIWVMKYKCWIKQLSLGPLNGVRTPLGFWKKGAFFVHSTNEQLLLYDPNTQEMRDLG 336 (362)
Q Consensus 264 ~g~L~l~~~-~~-----~~~~~~IW~l~~~~W~~~~~i~~~~~~~~~~~~~~~g~il~~~~~~~~~~yd~~~~~~~~v~ 336 (362)
++++++... .. ....-.||+.+-.....+.+++... ..-+.+..+|+.++..+.+.+.+||.++++++.+.
T Consensus 265 g~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~~v~~i~~~~--p~~ia~spdg~~l~v~n~~~v~v~D~~t~~l~~~~ 341 (361)
T 2oiz_A 265 SGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQRVARIPGRD--ALSMTIDQQRNLMLTLDGGNVNVYDISQPEPKLLR 341 (361)
T ss_dssp TTEEEEEEESSCCTTCTTCCCSEEEEEETTTTEEEEEEECTT--CCEEEEETTTTEEEEECSSCEEEEECSSSSCEEEE
T ss_pred CCeEEEEEccCCCcccccCCCceEEEEECCCCcEEEEEecCC--eeEEEECCCCCEEEEeCCCeEEEEECCCCcceeeE
Confidence 356776654 11 1123356665554445677776543 45566677887766655688999999998555554
No 144
>2kwv_A RAD30 homolog B, DNA polymerase IOTA; ubiquitin-binding motif, UBM, TL protein binding-signaling protein complex; HET: DNA; NMR {Mus musculus}
Probab=57.00 E-value=5.5 Score=23.15 Aligned_cols=20 Identities=20% Similarity=0.031 Sum_probs=15.5
Q ss_pred CcCCCcchHHHHHHHHccCC
Q 045569 3 MTGDEHFLEETIIEILSKLP 22 (362)
Q Consensus 3 ~~~~~~LP~Dll~eIL~rLP 22 (362)
.++.+.||.|+-+|||+--.
T Consensus 18 ~eVF~~LP~dIQ~Ells~~~ 37 (48)
T 2kwv_A 18 QEVFKQLPADIQEEILSGKS 37 (48)
T ss_dssp GGGTTTSCHHHHHHHTTCCC
T ss_pred HHHHHHCcHHHHHHHHhcch
Confidence 35667899999999987644
No 145
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=56.97 E-value=89 Score=26.41 Aligned_cols=96 Identities=16% Similarity=0.204 Sum_probs=54.0
Q ss_pred cEEEEEEcCCceee-eecCCCCCCCCCcEEEE-ECCeEEEEEEcCCCCeEEEEEeeCCeeEEEEEeCCCCCceeeEEEee
Q 045569 232 KVILSFHLGNEVFE-EIQEPYIPESTPTILGI-YNHSLCLLLSHNIENYYDIWVMKYKCWIKQLSLGPLNGVRTPLGFWK 309 (362)
Q Consensus 232 ~~il~fD~~~e~~~-~i~~P~~~~~~~~~l~~-~~g~L~l~~~~~~~~~~~IW~l~~~~W~~~~~i~~~~~~~~~~~~~~ 309 (362)
..|..+|+.+.+.. .+....... ..+.. -+|++.+.+. ....+.||-++... ....+.........+.+..
T Consensus 186 g~i~iwd~~~~~~~~~~~~h~~~v---~~l~~spd~~~l~s~s--~dg~i~iwd~~~~~--~~~~~~~h~~~v~~~~~sp 258 (321)
T 3ow8_A 186 GIINIFDIATGKLLHTLEGHAMPI---RSLTFSPDSQLLVTAS--DDGYIKIYDVQHAN--LAGTLSGHASWVLNVAFCP 258 (321)
T ss_dssp SCEEEEETTTTEEEEEECCCSSCC---CEEEECTTSCEEEEEC--TTSCEEEEETTTCC--EEEEECCCSSCEEEEEECT
T ss_pred CeEEEEECCCCcEEEEEcccCCce---eEEEEcCCCCEEEEEc--CCCeEEEEECCCcc--eeEEEcCCCCceEEEEECC
Confidence 36888898876542 333211110 23333 2566554444 46789999987632 2333432222223445556
Q ss_pred CCcEEEEe-cCCeEEEEeCCCCcEEE
Q 045569 310 KGAFFVHS-TNEQLLLYDPNTQEMRD 334 (362)
Q Consensus 310 ~g~il~~~-~~~~~~~yd~~~~~~~~ 334 (362)
++..++.. .++.+.+||+++++...
T Consensus 259 ~~~~l~s~s~D~~v~iwd~~~~~~~~ 284 (321)
T 3ow8_A 259 DDTHFVSSSSDKSVKVWDVGTRTCVH 284 (321)
T ss_dssp TSSEEEEEETTSCEEEEETTTTEEEE
T ss_pred CCCEEEEEeCCCcEEEEeCCCCEEEE
Confidence 67766554 47789999999876543
No 146
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=56.84 E-value=87 Score=26.27 Aligned_cols=135 Identities=11% Similarity=0.024 Sum_probs=78.0
Q ss_pred EEEEECCCCCceecccCCCccccccCCcce-EEECceEEEEeeccCCCccEEEEEEcCCcee-eeecCCCCCCCCCcEEE
Q 045569 184 VAVYSLSTNSWRYCDCFKSNHYYMDGAFDS-VYLDGVCYWLSEFRDNDHKVILSFHLGNEVF-EEIQEPYIPESTPTILG 261 (362)
Q Consensus 184 ~eVyss~~~~W~~~~~~~~~~~~~~~~~~~-v~~~G~lywl~~~~~~~~~~il~fD~~~e~~-~~i~~P~~~~~~~~~l~ 261 (362)
+.+++.+++.=...- .+. ... ..+ ...++.+|-+.... ..+.+||..+.+- ..++.+.. . .-|+
T Consensus 77 v~~iD~~Tgkv~~~~-l~~-~~F----geGit~~g~~Ly~ltw~~----~~v~V~D~~Tl~~~~ti~~~~e---G-wGLt 142 (268)
T 3nok_A 77 LRQLSLESAQPVWME-RLG-NIF----AEGLASDGERLYQLTWTE----GLLFTWSGMPPQRERTTRYSGE---G-WGLC 142 (268)
T ss_dssp EEECCSSCSSCSEEE-ECT-TCC----EEEEEECSSCEEEEESSS----CEEEEEETTTTEEEEEEECSSC---C-CCEE
T ss_pred EEEEECCCCcEEeEE-CCC-Ccc----eeEEEEeCCEEEEEEccC----CEEEEEECCcCcEEEEEeCCCc---e-eEEe
Confidence 778888876422211 211 111 223 44567888887653 4899999987554 56777543 1 3566
Q ss_pred EECCeEEEEEEcCCCCeEEEEEeeCCeeEEEEEeCCCC-C--ce--eeEEEeeCCcEEEEe-cCCeEEEEeCCCCcEE-E
Q 045569 262 IYNHSLCLLLSHNIENYYDIWVMKYKCWIKQLSLGPLN-G--VR--TPLGFWKKGAFFVHS-TNEQLLLYDPNTQEMR-D 334 (362)
Q Consensus 262 ~~~g~L~l~~~~~~~~~~~IW~l~~~~W~~~~~i~~~~-~--~~--~~~~~~~~g~il~~~-~~~~~~~yd~~~~~~~-~ 334 (362)
.-+++|++... .. .|++++-..=..+.+|.... . +. .-+. +.+|+|+... ..+.+..-|++++++. .
T Consensus 143 ~Dg~~L~vSdG---s~--~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe-~~dG~lyanvw~s~~I~vIDp~TG~V~~~ 216 (268)
T 3nok_A 143 YWNGKLVRSDG---GT--MLTFHEPDGFALVGAVQVKLRGQPVELINELE-CANGVIYANIWHSSDVLEIDPATGTVVGV 216 (268)
T ss_dssp EETTEEEEECS---SS--EEEEECTTTCCEEEEEECEETTEECCCEEEEE-EETTEEEEEETTCSEEEEECTTTCBEEEE
T ss_pred cCCCEEEEECC---CC--EEEEEcCCCCeEEEEEEeCCCCcccccccccE-EeCCEEEEEECCCCeEEEEeCCCCcEEEE
Confidence 66777776542 22 57777653333444554311 1 10 1122 3378887655 3678999999999874 4
Q ss_pred eeEe
Q 045569 335 LGRK 338 (362)
Q Consensus 335 v~~~ 338 (362)
+.+.
T Consensus 217 Idl~ 220 (268)
T 3nok_A 217 IDAS 220 (268)
T ss_dssp EECH
T ss_pred EECC
Confidence 5543
No 147
>1ddw_A GLGF-domain protein homer; pleckstrin homology domain fold, signaling protein; 1.70A {Rattus norvegicus} SCOP: b.55.1.4 PDB: 1ddv_A 2p8v_A 1i7a_A*
Probab=55.07 E-value=23 Score=25.77 Aligned_cols=39 Identities=13% Similarity=0.117 Sum_probs=28.5
Q ss_pred eEEEEeCCCc-ccccCCCCCcCCCCcccceeeeeeeeecCCCCCeEEEEEE
Q 045569 119 RITLWNRATK-ESRVLPKCTTVFPKYTSIFCKCTGFGLDPMSTDYKLVLIF 168 (362)
Q Consensus 119 ~~~V~NP~T~-~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~ 168 (362)
.++..||.|+ .|+..-... . .+.+-+|+..+.|+|+.+.
T Consensus 12 ~V~~~D~~tk~~W~p~g~~~-----~------~V~~~~d~~~~~yRIv~~~ 51 (120)
T 1ddw_A 12 HVFQIDPNTKKNWVPTSKHA-----V------TVSYFYDSTRNVYRIISLD 51 (120)
T ss_dssp EEEEECTTTSCSEEESCSSC-----E------EEEEEEETTTTEEEEEEEE
T ss_pred EEEEEcCCCCCceEeCCCCc-----e------EEEEEEcCCCCEEEEEEcc
Confidence 4889999996 895433221 1 5678889988999999864
No 148
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=54.62 E-value=96 Score=26.04 Aligned_cols=202 Identities=8% Similarity=0.031 Sum_probs=101.5
Q ss_pred eeeeEEEe-ecCceEEEEeCCCcccccCCCCCcCCCCcccceeeeeeeeecCCCCCeEEEEEEEEeecccccccCcceEE
Q 045569 107 YNGIFCIF-GNNNRITLWNRATKESRVLPKCTTVFPKYTSIFCKCTGFGLDPMSTDYKLVLIFTLWNEKLDLLYEFSHVA 185 (362)
Q Consensus 107 ~~GLl~~~-~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~e 185 (362)
.+|-|.+. .....++++||.+++...+..... .. ..++.+|+..+ ++... .... .....+.
T Consensus 54 ~~g~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~---~~------~~~i~~~~dg~---l~v~~--~~~~----~~~~~i~ 115 (333)
T 2dg1_A 54 RQGQLFLLDVFEGNIFKINPETKEIKRPFVSHK---AN------PAAIKIHKDGR---LFVCY--LGDF----KSTGGIF 115 (333)
T ss_dssp TTSCEEEEETTTCEEEEECTTTCCEEEEEECSS---SS------EEEEEECTTSC---EEEEE--CTTS----SSCCEEE
T ss_pred CCCCEEEEECCCCEEEEEeCCCCcEEEEeeCCC---CC------cceEEECCCCc---EEEEe--CCCC----CCCceEE
Confidence 45666554 445579999999988765431111 11 56777776542 22221 1110 0013577
Q ss_pred EEECCCCCceec-ccCCCccccccCCcceEEE--CceEEEEeecc--CCCccEEEEEEcCCceeeeecCCCCCCCCCcEE
Q 045569 186 VYSLSTNSWRYC-DCFKSNHYYMDGAFDSVYL--DGVCYWLSEFR--DNDHKVILSFHLGNEVFEEIQEPYIPESTPTIL 260 (362)
Q Consensus 186 Vyss~~~~W~~~-~~~~~~~~~~~~~~~~v~~--~G~lywl~~~~--~~~~~~il~fD~~~e~~~~i~~P~~~~~~~~~l 260 (362)
+|+..++.-+.. ..... .. ....+.+ +|.+|...... ......|..+|..++++..+.-. ... ...+
T Consensus 116 ~~d~~~~~~~~~~~~~~~-~~----~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~--~~~-~~~i 187 (333)
T 2dg1_A 116 AATENGDNLQDIIEDLST-AY----CIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPIIQN--ISV-ANGI 187 (333)
T ss_dssp EECTTSCSCEEEECSSSS-CC----CEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEEEEEEE--ESS-EEEE
T ss_pred EEeCCCCEEEEEEccCcc-CC----cccceEECCCCCEEEEeccccccCCCceEEEEeCCCCEEEEeecC--CCc-ccce
Confidence 888777655422 21111 00 0122222 57776654321 01134799999887666544210 000 1223
Q ss_pred EE-ECCe-EEEEEEcCCCCeEEEEEeeC--CeeEEE---EEeCCCC-CceeeEEEeeCCcEEEEec-CCeEEEEeCCCCc
Q 045569 261 GI-YNHS-LCLLLSHNIENYYDIWVMKY--KCWIKQ---LSLGPLN-GVRTPLGFWKKGAFFVHST-NEQLLLYDPNTQE 331 (362)
Q Consensus 261 ~~-~~g~-L~l~~~~~~~~~~~IW~l~~--~~W~~~---~~i~~~~-~~~~~~~~~~~g~il~~~~-~~~~~~yd~~~~~ 331 (362)
.. .+|+ |++... ....+.+|.++. ...... ....... .....+++..+|.+++... .+.+..||++.+.
T Consensus 188 ~~~~dg~~l~v~~~--~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~v~~~d~~g~~ 265 (333)
T 2dg1_A 188 ALSTDEKVLWVTET--TANRLHRIALEDDGVTIQPFGATIPYYFTGHEGPDSCCIDSDDNLYVAMYGQGRVLVFNKRGYP 265 (333)
T ss_dssp EECTTSSEEEEEEG--GGTEEEEEEECTTSSSEEEEEEEEEEECCSSSEEEEEEEBTTCCEEEEEETTTEEEEECTTSCE
T ss_pred EECCCCCEEEEEeC--CCCeEEEEEecCCCcCcccccceEEEecCCCCCCCceEECCCCCEEEEEcCCCEEEEECCCCCE
Confidence 32 2554 665543 346778887753 222211 1111111 1223355556788888764 5789999997766
Q ss_pred EEEee
Q 045569 332 MRDLG 336 (362)
Q Consensus 332 ~~~v~ 336 (362)
.+.+.
T Consensus 266 ~~~~~ 270 (333)
T 2dg1_A 266 IGQIL 270 (333)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 66654
No 149
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=54.52 E-value=1.2e+02 Score=26.94 Aligned_cols=111 Identities=14% Similarity=0.152 Sum_probs=59.2
Q ss_pred eEEECceEEEEeeccCCCccEEEEEEcCCcee-eeecCCCCCCCCCcEEEEECCeEEEEEEcCCCCeEEEEEeeCCeeEE
Q 045569 213 SVYLDGVCYWLSEFRDNDHKVILSFHLGNEVF-EEIQEPYIPESTPTILGIYNHSLCLLLSHNIENYYDIWVMKYKCWIK 291 (362)
Q Consensus 213 ~v~~~G~lywl~~~~~~~~~~il~fD~~~e~~-~~i~~P~~~~~~~~~l~~~~g~L~l~~~~~~~~~~~IW~l~~~~W~~ 291 (362)
.+..+|........ ...|..+|+.+.+- ..+..+..... ...-...++.+.+++. ....+.||-++..+...
T Consensus 324 ~~~~~~~~l~~~~~----dg~i~vwd~~~~~~~~~~~~~~~~~~-~v~~~~~~~~~l~s~~--~dg~v~iwd~~~~~~~~ 396 (445)
T 2ovr_B 324 GMELKDNILVSGNA----DSTVKIWDIKTGQCLQTLQGPNKHQS-AVTCLQFNKNFVITSS--DDGTVKLWDLKTGEFIR 396 (445)
T ss_dssp EEEEETTEEEEEET----TSCEEEEETTTCCEEEEECSTTSCSS-CEEEEEECSSEEEEEE--TTSEEEEEETTTCCEEE
T ss_pred EEEEeCCEEEEEeC----CCeEEEEECCCCcEEEEEccCCCCCC-CEEEEEECCCEEEEEe--CCCeEEEEECCCCceee
Confidence 34455654433333 34789999976544 44554432222 1333344677655555 46799999998744333
Q ss_pred EEEeCCC---CCceeeEEEeeCCcEEEEec-CC----eEEEEeCCCC
Q 045569 292 QLSLGPL---NGVRTPLGFWKKGAFFVHST-NE----QLLLYDPNTQ 330 (362)
Q Consensus 292 ~~~i~~~---~~~~~~~~~~~~g~il~~~~-~~----~~~~yd~~~~ 330 (362)
....... ......+.+..+|.++.... ++ ++.+||.+.+
T Consensus 397 ~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~dg~~~~~l~v~df~~~ 443 (445)
T 2ovr_B 397 NLVTLESGGSGGVVWRIRASNTKLVCAVGSRNGTEETKLLVLDFDVD 443 (445)
T ss_dssp EEEECTTGGGTCEEEEEEECSSEEEEEEECSSSSSCCEEEEEECCCC
T ss_pred eeeccccCCCCceEEEEEecCCEEEEEEcccCCCCccEEEEEECCCC
Confidence 3321111 11223344445666655543 33 4899998754
No 150
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=54.49 E-value=1.4e+02 Score=27.80 Aligned_cols=192 Identities=10% Similarity=0.053 Sum_probs=98.3
Q ss_pred eeeeEEEe-ecCceEEEEeCCCccccc-CCCCCcCCCCcccceeeeeeeeecCCCCCeEEEEEEEEeecccccccCcceE
Q 045569 107 YNGIFCIF-GNNNRITLWNRATKESRV-LPKCTTVFPKYTSIFCKCTGFGLDPMSTDYKLVLIFTLWNEKLDLLYEFSHV 184 (362)
Q Consensus 107 ~~GLl~~~-~~~~~~~V~NP~T~~~~~-LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~ 184 (362)
-+|.++.. ...+.+.|+|+.|++... ++... . ..++.++|.. +|-.+.- .+ -.+
T Consensus 147 p~~~~~vs~~~d~~V~v~D~~t~~~~~~i~~g~-----~------~~~v~~spdg-~~l~v~~----~d--------~~V 202 (543)
T 1nir_A 147 LPNLFSVTLRDAGQIALVDGDSKKIVKVIDTGY-----A------VHISRMSASG-RYLLVIG----RD--------ARI 202 (543)
T ss_dssp GGGEEEEEEGGGTEEEEEETTTCCEEEEEECST-----T------EEEEEECTTS-CEEEEEE----TT--------SEE
T ss_pred CCCEEEEEEcCCCeEEEEECCCceEEEEEecCc-----c------cceEEECCCC-CEEEEEC----CC--------CeE
Confidence 36766666 455679999999987643 33211 1 3466677643 3322221 11 358
Q ss_pred EEEEC--CCCCceecccCCCccccccCCcceEEE------CceEEEEeeccCCCccEEEEEEcCCcee-eeecCCCCC--
Q 045569 185 AVYSL--STNSWRYCDCFKSNHYYMDGAFDSVYL------DGVCYWLSEFRDNDHKVILSFHLGNEVF-EEIQEPYIP-- 253 (362)
Q Consensus 185 eVyss--~~~~W~~~~~~~~~~~~~~~~~~~v~~------~G~lywl~~~~~~~~~~il~fD~~~e~~-~~i~~P~~~-- 253 (362)
.+|+. .++. .+...+... ...++.+ +|..-+..... ...|..+|..+.+. +.++.+...
T Consensus 203 ~v~D~~~~t~~--~~~~i~~g~-----~p~~va~sp~~~~dg~~l~v~~~~---~~~v~v~D~~t~~~~~~i~~~g~~~~ 272 (543)
T 1nir_A 203 DMIDLWAKEPT--KVAEIKIGI-----EARSVESSKFKGYEDRYTIAGAYW---PPQFAIMDGETLEPKQIVSTRGMTVD 272 (543)
T ss_dssp EEEETTSSSCE--EEEEEECCS-----EEEEEEECCSTTCTTTEEEEEEEE---SSEEEEEETTTCCEEEEEECCEECSS
T ss_pred EEEECcCCCCc--EEEEEecCC-----CcceEEeCCCcCCCCCEEEEEEcc---CCeEEEEeccccccceeecccCcccC
Confidence 88888 5542 221111100 0122222 56543343322 23688899887554 445543210
Q ss_pred ------CCCCcEEEEE-CCeEEEEEEcCCCCeEEEEEeeCCeeEEEEEeCCCCCceeeEEEeeCCcEEEE-ec-CCeEEE
Q 045569 254 ------ESTPTILGIY-NHSLCLLLSHNIENYYDIWVMKYKCWIKQLSLGPLNGVRTPLGFWKKGAFFVH-ST-NEQLLL 324 (362)
Q Consensus 254 ------~~~~~~l~~~-~g~L~l~~~~~~~~~~~IW~l~~~~W~~~~~i~~~~~~~~~~~~~~~g~il~~-~~-~~~~~~ 324 (362)
......+... +|...++... ....+.+|-..+..-.++.+++. ....+.+.+..+|+.++. .. ++.+.+
T Consensus 273 ~~~~~~~~~v~~i~~s~~~~~~~vs~~-~~g~i~vvd~~~~~~l~~~~i~~-~~~~~~~~~spdg~~l~va~~~~~~v~v 350 (543)
T 1nir_A 273 TQTYHPEPRVAAIIASHEHPEFIVNVK-ETGKVLLVNYKDIDNLTVTSIGA-APFLHDGGWDSSHRYFMTAANNSNKVAV 350 (543)
T ss_dssp SCCEESCCCEEEEEECSSSSEEEEEET-TTTEEEEEECTTSSSCEEEEEEC-CSSCCCEEECTTSCEEEEEEGGGTEEEE
T ss_pred ccccccCCceEEEEECCCCCEEEEEEC-CCCeEEEEEecCCCcceeEEecc-CcCccCceECCCCCEEEEEecCCCeEEE
Confidence 0011233333 2444444443 45677777776622122334442 223345666677875554 33 678999
Q ss_pred EeCCCCcEEE
Q 045569 325 YDPNTQEMRD 334 (362)
Q Consensus 325 yd~~~~~~~~ 334 (362)
+|.+++++..
T Consensus 351 ~D~~tg~l~~ 360 (543)
T 1nir_A 351 IDSKDRRLSA 360 (543)
T ss_dssp EETTTTEEEE
T ss_pred EECCCCeEEE
Confidence 9999988754
No 151
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=54.37 E-value=96 Score=25.98 Aligned_cols=108 Identities=5% Similarity=-0.051 Sum_probs=56.9
Q ss_pred CceEEEEeeccCCCccEEEEEEcCCcee-eeecCCCCCCCCCcEEEE-ECCeEEEEEEcCCCCeEEEEEeeCCeeEEEEE
Q 045569 217 DGVCYWLSEFRDNDHKVILSFHLGNEVF-EEIQEPYIPESTPTILGI-YNHSLCLLLSHNIENYYDIWVMKYKCWIKQLS 294 (362)
Q Consensus 217 ~G~lywl~~~~~~~~~~il~fD~~~e~~-~~i~~P~~~~~~~~~l~~-~~g~L~l~~~~~~~~~~~IW~l~~~~W~~~~~ 294 (362)
+|.+|..... ...|..+|+.+.+. ..++++..... ..+.. -+|+..++... ....+.+|-++...-.....
T Consensus 10 ~~~~~v~~~~----~~~v~~~d~~~~~~~~~~~~~~~~~~--~~~~~s~dg~~~~v~~~-~~~~i~~~d~~t~~~~~~~~ 82 (349)
T 1jmx_B 10 GHEYMIVTNY----PNNLHVVDVASDTVYKSCVMPDKFGP--GTAMMAPDNRTAYVLNN-HYGDIYGIDLDTCKNTFHAN 82 (349)
T ss_dssp TCEEEEEEET----TTEEEEEETTTTEEEEEEECSSCCSS--CEEEECTTSSEEEEEET-TTTEEEEEETTTTEEEEEEE
T ss_pred CCEEEEEeCC----CCeEEEEECCCCcEEEEEecCCCCCC--ceeEECCCCCEEEEEeC-CCCcEEEEeCCCCcEEEEEE
Confidence 4555554443 34799999988766 44666641111 23332 35654333332 45677788776543222222
Q ss_pred eCCCC----CceeeEEEeeCCcEEEEec-------------CCeEEEEeCCCCc
Q 045569 295 LGPLN----GVRTPLGFWKKGAFFVHST-------------NEQLLLYDPNTQE 331 (362)
Q Consensus 295 i~~~~----~~~~~~~~~~~g~il~~~~-------------~~~~~~yd~~~~~ 331 (362)
+.... .....+.+..+|+.++... ...+..||+++++
T Consensus 83 ~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~ 136 (349)
T 1jmx_B 83 LSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGL 136 (349)
T ss_dssp SCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGG
T ss_pred cccccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCcc
Confidence 22110 0013345556776554433 3789999998754
No 152
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=54.03 E-value=94 Score=25.77 Aligned_cols=64 Identities=9% Similarity=0.150 Sum_probs=40.4
Q ss_pred CeEEEEEEcCCCCeEEEEEeeCCeeEEEEEeCCCCCceeeEEEeeC--CcEEEE-ecCCeEEEEeCCCC
Q 045569 265 HSLCLLLSHNIENYYDIWVMKYKCWIKQLSLGPLNGVRTPLGFWKK--GAFFVH-STNEQLLLYDPNTQ 330 (362)
Q Consensus 265 g~L~l~~~~~~~~~~~IW~l~~~~W~~~~~i~~~~~~~~~~~~~~~--g~il~~-~~~~~~~~yd~~~~ 330 (362)
|.+.+.+. ....+.||.++...|.....+.........+.+..+ |.+++. ..++.+..||++++
T Consensus 67 g~~l~s~s--~D~~v~iWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~ 133 (297)
T 2pm7_B 67 GTILASCS--YDGKVMIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKEN 133 (297)
T ss_dssp CSEEEEEE--TTTEEEEEEBSSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSS
T ss_pred CCEEEEEc--CCCEEEEEEcCCCceEEEEEeecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCC
Confidence 66655555 468999999988767666655432222233444443 555554 44788999998875
No 153
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=53.54 E-value=90 Score=25.41 Aligned_cols=159 Identities=11% Similarity=-0.045 Sum_probs=78.9
Q ss_pred eeeeeecCCCCCeEEEEEEEEeecccccccCcceEEEEECCCCCceecccCCCccccccCCcceEEE---CceEEEEeec
Q 045569 150 CTGFGLDPMSTDYKLVLIFTLWNEKLDLLYEFSHVAVYSLSTNSWRYCDCFKSNHYYMDGAFDSVYL---DGVCYWLSEF 226 (362)
Q Consensus 150 ~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~eVyss~~~~W~~~~~~~~~~~~~~~~~~~v~~---~G~lywl~~~ 226 (362)
..++.+|+..+.-.+.-. . ...+.+|+..++.-+.+... ... ...++.+ +|.+||....
T Consensus 38 ~~gi~~d~~~~~ly~~d~----~--------~~~I~~~~~~g~~~~~~~~~--~~~----~p~~ia~d~~~~~lyv~d~~ 99 (267)
T 1npe_A 38 IIGLAFDCVDKVVYWTDI----S--------EPSIGRASLHGGEPTTIIRQ--DLG----SPEGIALDHLGRTIFWTDSQ 99 (267)
T ss_dssp EEEEEEETTTTEEEEEET----T--------TTEEEEEESSSCCCEEEECT--TCC----CEEEEEEETTTTEEEEEETT
T ss_pred EEEEEEecCCCEEEEEEC----C--------CCEEEEEecCCCCcEEEEEC--CCC----CccEEEEEecCCeEEEEECC
Confidence 568888876543222211 1 23577888766532222110 111 1334444 5799998765
Q ss_pred cCCCccEEEEEEcCCceeeeecCCCCCCCCCcEEEEE--CCeEEEEEEcCCCCeEEEEEeeCCeeEEEEEeCCCCCceee
Q 045569 227 RDNDHKVILSFHLGNEVFEEIQEPYIPESTPTILGIY--NHSLCLLLSHNIENYYDIWVMKYKCWIKQLSLGPLNGVRTP 304 (362)
Q Consensus 227 ~~~~~~~il~fD~~~e~~~~i~~P~~~~~~~~~l~~~--~g~L~l~~~~~~~~~~~IW~l~~~~W~~~~~i~~~~~~~~~ 304 (362)
...|..+|+....-..+ .+.... ....++.. +|.|++.........+....++.. -.+.. ....-.....
T Consensus 100 ----~~~I~~~~~~g~~~~~~-~~~~~~-~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~-~~~~~-~~~~~~~P~g 171 (267)
T 1npe_A 100 ----LDRIEVAKMDGTQRRVL-FDTGLV-NPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGT-NRRIL-AQDNLGLPNG 171 (267)
T ss_dssp ----TTEEEEEETTSCSCEEE-ECSSCS-SEEEEEEETTTTEEEEEECCSSSCEEEEEETTSC-CCEEE-ECTTCSCEEE
T ss_pred ----CCEEEEEEcCCCCEEEE-EECCCC-CccEEEEeeCCCEEEEEECCCCCcEEEEEecCCC-CcEEE-EECCCCCCcE
Confidence 34799999876543333 121111 11334443 678887764311334444444332 11111 1111112333
Q ss_pred EEEeeC-CcEEEEec-CCeEEEEeCCCCcEEE
Q 045569 305 LGFWKK-GAFFVHST-NEQLLLYDPNTQEMRD 334 (362)
Q Consensus 305 ~~~~~~-g~il~~~~-~~~~~~yd~~~~~~~~ 334 (362)
+++..+ +.+|+... .+.+..+|++++..+.
T Consensus 172 ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~ 203 (267)
T 1npe_A 172 LTFDAFSSQLCWVDAGTHRAECLNPAQPGRRK 203 (267)
T ss_dssp EEEETTTTEEEEEETTTTEEEEEETTEEEEEE
T ss_pred EEEcCCCCEEEEEECCCCEEEEEecCCCceEE
Confidence 444444 55666654 5689999998765443
No 154
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=53.03 E-value=56 Score=27.42 Aligned_cols=109 Identities=6% Similarity=-0.008 Sum_probs=57.9
Q ss_pred Cce-EEEEeeccCCCccEEEEEEcCCceeeeecCCCCCCCCCcEEE-EECCeEEEEEEcCCCCeEEEEEeeCCeeEEEEE
Q 045569 217 DGV-CYWLSEFRDNDHKVILSFHLGNEVFEEIQEPYIPESTPTILG-IYNHSLCLLLSHNIENYYDIWVMKYKCWIKQLS 294 (362)
Q Consensus 217 ~G~-lywl~~~~~~~~~~il~fD~~~e~~~~i~~P~~~~~~~~~l~-~~~g~L~l~~~~~~~~~~~IW~l~~~~W~~~~~ 294 (362)
+|. +||..... ..|..+|.. ++.+.+..|.... ..+. ..+|+|.+... ....+.+|..+ ++......
T Consensus 55 ~g~~l~~~d~~~----~~i~~~~~~-g~~~~~~~~~~~~---~gl~~d~dG~l~v~~~--~~~~v~~~~~~-g~~~~~~~ 123 (305)
T 3dr2_A 55 AQRTLVWSDLVG----RRVLGWRED-GTVDVLLDATAFT---NGNAVDAQQRLVHCEH--GRRAITRSDAD-GQAHLLVG 123 (305)
T ss_dssp GGTEEEEEETTT----TEEEEEETT-SCEEEEEESCSCE---EEEEECTTSCEEEEET--TTTEEEEECTT-SCEEEEEC
T ss_pred CCCEEEEEECCC----CEEEEEeCC-CCEEEEeCCCCcc---ceeeECCCCCEEEEEC--CCCEEEEECCC-CCEEEEEe
Confidence 454 89987653 478899984 4455554443211 2233 23677765443 23455555443 33322221
Q ss_pred -eCCCC-CceeeEEEeeCCcEEEEe------------------cCCeEEEEeCCCCcEEEee
Q 045569 295 -LGPLN-GVRTPLGFWKKGAFFVHS------------------TNEQLLLYDPNTQEMRDLG 336 (362)
Q Consensus 295 -i~~~~-~~~~~~~~~~~g~il~~~------------------~~~~~~~yd~~~~~~~~v~ 336 (362)
..... .....+.+..+|.+++.. ....++.||+++++++.+.
T Consensus 124 ~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~ 185 (305)
T 3dr2_A 124 RYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA 185 (305)
T ss_dssp EETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE
T ss_pred ccCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe
Confidence 11000 011235555678888842 1256999999888876653
No 155
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=52.46 E-value=98 Score=30.02 Aligned_cols=57 Identities=16% Similarity=0.224 Sum_probs=33.7
Q ss_pred cceEEEC---ceEEEEeeccCCCccEEEEEEcCCceeeee-cCCCCCCCCCcEEEEECCeEEEEEE
Q 045569 211 FDSVYLD---GVCYWLSEFRDNDHKVILSFHLGNEVFEEI-QEPYIPESTPTILGIYNHSLCLLLS 272 (362)
Q Consensus 211 ~~~v~~~---G~lywl~~~~~~~~~~il~fD~~~e~~~~i-~~P~~~~~~~~~l~~~~g~L~l~~~ 272 (362)
..++.++ |.|||.... ...|.++|+....-+.+ ..+...... ..|...++.|+++..
T Consensus 542 PnGlavd~~~~~LY~aD~~----~~~I~~~d~dG~~~~~~~~~~~~~~~P-~glavd~~~lywtd~ 602 (699)
T 1n7d_A 542 PNGITLDLLSGRLYWVDSK----LHSISSIDVNGGNRKTILEDEKRLAHP-FSLAVFEDKVFWTDI 602 (699)
T ss_dssp CCCEEECTTTCCEEEEETT----TTEEEEECSSSSCCEEECCCSSSCSSC-CCCEEETTEEEEECS
T ss_pred ccEEEEeccCCEEEEEecC----CCeEEEEccCCCceEEEEecCCcCCCc-eEeEEECCEEEEEeC
Confidence 4566664 899998865 35899999976443333 222211111 345556777776653
No 156
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=52.43 E-value=1.1e+02 Score=25.97 Aligned_cols=190 Identities=11% Similarity=0.079 Sum_probs=92.0
Q ss_pred eEEEEeCCCcccccCCCCCcCCCCcccceeeeeeeeecCCCCCeEEEEEEEEeecccccccCcceEEEEECCCC--Ccee
Q 045569 119 RITLWNRATKESRVLPKCTTVFPKYTSIFCKCTGFGLDPMSTDYKLVLIFTLWNEKLDLLYEFSHVAVYSLSTN--SWRY 196 (362)
Q Consensus 119 ~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~eVyss~~~--~W~~ 196 (362)
.++++||.|++....-... ... ...++.+|+..+ ++... .. ...+.+|+..+. .=..
T Consensus 70 ~i~~~d~~~g~~~~~~~~~--~~~------~p~gia~d~~g~---l~v~d--~~--------~~~v~~~~~~g~~~~~~~ 128 (329)
T 3fvz_A 70 TILVIDPNNAEILQSSGKN--LFY------LPHGLSIDTDGN---YWVTD--VA--------LHQVFKLDPHSKEGPLLI 128 (329)
T ss_dssp CEEEECTTTCCEEEEECTT--TCS------SEEEEEECTTSC---EEEEE--TT--------TTEEEEECTTCSSCCSEE
T ss_pred cEEEEECCCCeEEeccCCC--ccC------CceEEEECCCCC---EEEEE--CC--------CCEEEEEeCCCCeEEEEE
Confidence 5999999988865321110 111 256888887544 22221 11 235777776544 1122
Q ss_pred cccCC-Ccc-ccccCCcceEEE---CceEEEEeeccCCCccEEEEEEcCCceeeeecCCCCC-----C--CCCcEEEEE-
Q 045569 197 CDCFK-SNH-YYMDGAFDSVYL---DGVCYWLSEFRDNDHKVILSFHLGNEVFEEIQEPYIP-----E--STPTILGIY- 263 (362)
Q Consensus 197 ~~~~~-~~~-~~~~~~~~~v~~---~G~lywl~~~~~~~~~~il~fD~~~e~~~~i~~P~~~-----~--~~~~~l~~~- 263 (362)
+.... ... ........++.+ +|.+|+..... ...|..||...+....+..+... . .....++..
T Consensus 129 ~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~---~~~I~~~~~~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~ 205 (329)
T 3fvz_A 129 LGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYC---NSRIVQFSPSGKFVTQWGEESSGSSPRPGQFSVPHSLALVP 205 (329)
T ss_dssp ESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSS---CCEEEEECTTSCEEEEECEECCSSSCCTTEESCEEEEEEET
T ss_pred ecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCC---CCeEEEEcCCCCEEEEeccCCCCCCCCCcccCCCcEEEEEC
Confidence 22110 000 000001344555 58899887421 34899999766655555322111 0 011334443
Q ss_pred C-CeEEEEEEcCCCCeEEEEEeeCCeeEEEEEeCCCCCceeeEEEee------CCcEEEEec-CCeEEEEeCCCCcEEE
Q 045569 264 N-HSLCLLLSHNIENYYDIWVMKYKCWIKQLSLGPLNGVRTPLGFWK------KGAFFVHST-NEQLLLYDPNTQEMRD 334 (362)
Q Consensus 264 ~-g~L~l~~~~~~~~~~~IW~l~~~~W~~~~~i~~~~~~~~~~~~~~------~g~il~~~~-~~~~~~yd~~~~~~~~ 334 (362)
+ |.|+++.. ....+.+|..+.+.............-...+.+.. +|.+++... ...+..+|..++++..
T Consensus 206 ~~g~l~v~d~--~~~~I~~~~~~~G~~~~~~~~~~~~~~~~~~~~~pg~~~~~~g~~~v~~~~~~~v~~~~~~~g~~~~ 282 (329)
T 3fvz_A 206 HLDQLCVADR--ENGRIQCFKTDTKEFVREIKHASFGRNVFAISYIPGFLFAVNGKPYFGDQEPVQGFVMNFSSGEIID 282 (329)
T ss_dssp TTTEEEEEET--TTTEEEEEETTTCCEEEEECCTTTTTCEEEEEEETTEEEEEECCCCTTCSCCCCEEEEETTTCCEEE
T ss_pred CCCEEEEEEC--CCCEEEEEECCCCcEEEEEeccccCCCcceeeecCCEEEEeCCCEEeccCCCcEEEEEEcCCCeEEE
Confidence 3 78877765 46788888887443333322221111111222222 233222211 3468899988776544
No 157
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=52.32 E-value=1e+02 Score=25.78 Aligned_cols=103 Identities=11% Similarity=-0.030 Sum_probs=59.3
Q ss_pred CceEEEEeeccCCCccEEEEEEcCCceeeeecCCCCCCCCCcEEEE-ECCeEEEEEEcCCCCeEEEEEeeC--CeeEEEE
Q 045569 217 DGVCYWLSEFRDNDHKVILSFHLGNEVFEEIQEPYIPESTPTILGI-YNHSLCLLLSHNIENYYDIWVMKY--KCWIKQL 293 (362)
Q Consensus 217 ~G~lywl~~~~~~~~~~il~fD~~~e~~~~i~~P~~~~~~~~~l~~-~~g~L~l~~~~~~~~~~~IW~l~~--~~W~~~~ 293 (362)
+|.+||..... ..|..+|..++.-..+..+... ..++. -+|+|+++... .....|+.++. .......
T Consensus 42 ~g~lyv~d~~~----~~I~~~d~~g~~~~~~~~~~~p----~gia~~~dG~l~vad~~--~~~~~v~~~d~~~g~~~~~~ 111 (306)
T 2p4o_A 42 DGTIFVTNHEV----GEIVSITPDGNQQIHATVEGKV----SGLAFTSNGDLVATGWN--ADSIPVVSLVKSDGTVETLL 111 (306)
T ss_dssp TSCEEEEETTT----TEEEEECTTCCEEEEEECSSEE----EEEEECTTSCEEEEEEC--TTSCEEEEEECTTSCEEEEE
T ss_pred CCCEEEEeCCC----CeEEEECCCCceEEEEeCCCCc----eeEEEcCCCcEEEEecc--CCcceEEEEcCCCCeEEEEE
Confidence 68899987542 4799999987654445554221 23433 36788776642 22345666653 5555544
Q ss_pred EeCCCCCceeeEEEeeCCcEEEEec-CCeEEEEeCCCC
Q 045569 294 SLGPLNGVRTPLGFWKKGAFFVHST-NEQLLLYDPNTQ 330 (362)
Q Consensus 294 ~i~~~~~~~~~~~~~~~g~il~~~~-~~~~~~yd~~~~ 330 (362)
.+... ....-.+.+.++.+++... .+.++.+|+.++
T Consensus 112 ~~~~~-~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~ 148 (306)
T 2p4o_A 112 TLPDA-IFLNGITPLSDTQYLTADSYRGAIWLIDVVQP 148 (306)
T ss_dssp ECTTC-SCEEEEEESSSSEEEEEETTTTEEEEEETTTT
T ss_pred eCCCc-cccCcccccCCCcEEEEECCCCeEEEEeCCCC
Confidence 44321 1222233455566666653 678999998764
No 158
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=52.24 E-value=1e+02 Score=25.70 Aligned_cols=102 Identities=8% Similarity=0.119 Sum_probs=55.3
Q ss_pred cEEEEEEcCCceeeeecCCCCCCCCCcEEEE-ECCe-EEEEEEcC---CCCeEEEEEeeCCeeEEEEEe-CCCCCceeeE
Q 045569 232 KVILSFHLGNEVFEEIQEPYIPESTPTILGI-YNHS-LCLLLSHN---IENYYDIWVMKYKCWIKQLSL-GPLNGVRTPL 305 (362)
Q Consensus 232 ~~il~fD~~~e~~~~i~~P~~~~~~~~~l~~-~~g~-L~l~~~~~---~~~~~~IW~l~~~~W~~~~~i-~~~~~~~~~~ 305 (362)
..|..+|..+.++..+. .. .. ...++. -+|+ |+++.... ....+.+|.++.........+ ........-+
T Consensus 169 ~~v~~~d~~~g~~~~~~-~~--~~-p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~pdgi 244 (305)
T 3dr2_A 169 HSVYRLPPDGSPLQRMA-DL--DH-PNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGALHDRRHFASVPDGLPDGF 244 (305)
T ss_dssp EEEEEECSSSCCCEEEE-EE--SS-EEEEEECTTSSEEEEEECCC---CCCEEEEEEEETTEEEEEEEEECCSSSCCCSE
T ss_pred CeEEEEcCCCCcEEEEe-cC--CC-CcceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCCccCCeEEEECCCCCCCeE
Confidence 57999999888776653 11 11 112333 3555 55554321 024566665555332222222 1111222345
Q ss_pred EEeeCCcEEEEecCCeEEEEeCCCCcEEEeeEe
Q 045569 306 GFWKKGAFFVHSTNEQLLLYDPNTQEMRDLGRK 338 (362)
Q Consensus 306 ~~~~~g~il~~~~~~~~~~yd~~~~~~~~v~~~ 338 (362)
.+..+|.|++.. ...+..||++.+.+..+...
T Consensus 245 ~~d~~G~lwv~~-~~gv~~~~~~g~~~~~~~~~ 276 (305)
T 3dr2_A 245 CVDRGGWLWSSS-GTGVCVFDSDGQLLGHIPTP 276 (305)
T ss_dssp EECTTSCEEECC-SSEEEEECTTSCEEEEEECS
T ss_pred EECCCCCEEEec-CCcEEEECCCCCEEEEEECC
Confidence 556678877765 56799999988777776643
No 159
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=52.17 E-value=1.1e+02 Score=25.89 Aligned_cols=66 Identities=12% Similarity=0.089 Sum_probs=38.9
Q ss_pred CeEEEEEEcCCCCeEEEEEeeCCeeEEEEEeCCCCCceeeEEEeeCCcEEEEe-cCCeEEEEeCCCCcE
Q 045569 265 HSLCLLLSHNIENYYDIWVMKYKCWIKQLSLGPLNGVRTPLGFWKKGAFFVHS-TNEQLLLYDPNTQEM 332 (362)
Q Consensus 265 g~L~l~~~~~~~~~~~IW~l~~~~W~~~~~i~~~~~~~~~~~~~~~g~il~~~-~~~~~~~yd~~~~~~ 332 (362)
+.+.+.+. ....+.||.+++........+.....-...+.+..++.+++.. .++.+..||+++++.
T Consensus 48 ~~~l~tgs--~D~~v~vW~~~~~~~~~~~~l~gh~~~v~~~~~~~~~~~l~s~s~D~~i~lWd~~~~~~ 114 (321)
T 3ow8_A 48 SETVVTGS--LDDLVKVWKWRDERLDLQWSLEGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLENGKQ 114 (321)
T ss_dssp -CEEEEEE--TTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEE
T ss_pred CCEEEEEc--CCCCEEEEECCCCCeeeeeeeccCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCCE
Confidence 44544444 4678999999875544444454222212333444556665554 377899999887654
No 160
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=52.08 E-value=1.8e+02 Score=28.36 Aligned_cols=140 Identities=13% Similarity=-0.053 Sum_probs=67.9
Q ss_pred eEEEEECCCCCceecccCC-----CccccccCCcceEEEC--ceEEEEeeccCCCccEEEEEEcCCceeeeecCCCCCCC
Q 045569 183 HVAVYSLSTNSWRYCDCFK-----SNHYYMDGAFDSVYLD--GVCYWLSEFRDNDHKVILSFHLGNEVFEEIQEPYIPES 255 (362)
Q Consensus 183 ~~eVyss~~~~W~~~~~~~-----~~~~~~~~~~~~v~~~--G~lywl~~~~~~~~~~il~fD~~~e~~~~i~~P~~~~~ 255 (362)
.+..|+..++.++.....+ ..+.. ..-.+++.+ |.+ |+.... ..|..+|..+.++..+..|.....
T Consensus 334 Gl~~~~~~~~~~~~~~~~~~~~~~~~l~~--~~v~~i~~d~~g~l-Wigt~~----~Gl~~~~~~~~~~~~~~~~~~~~~ 406 (781)
T 3v9f_A 334 GINFISNAPPTFHTWSYSPTQMNESSLSN--KVVSSVCDDGQGKL-WIGTDG----GGINVFENGKRVAIYNKENRELLS 406 (781)
T ss_dssp CEEEECSSCCSCEEEC----CCCSSCCSS--SCEEEEEECTTSCE-EEEEBS----SCEEEEETTEEEEECC-----CCC
T ss_pred eEEEeCCCCCcceeeccCccccccCCCCC--cceEEEEEcCCCCE-EEEeCC----CcEEEEECCCCeEEEccCCCCCCC
Confidence 3667777766665543211 11110 112344443 554 555432 259999999988876632222211
Q ss_pred CC-cEEEEE-CCeEEEEEEcCCCCeEEEEEeeC--CeeEEEEEeCCCCCceeeEEEeeCCcEEEEecCCeEEEEeCCCCc
Q 045569 256 TP-TILGIY-NHSLCLLLSHNIENYYDIWVMKY--KCWIKQLSLGPLNGVRTPLGFWKKGAFFVHSTNEQLLLYDPNTQE 331 (362)
Q Consensus 256 ~~-~~l~~~-~g~L~l~~~~~~~~~~~IW~l~~--~~W~~~~~i~~~~~~~~~~~~~~~g~il~~~~~~~~~~yd~~~~~ 331 (362)
.. ..+.+. +|.|.+-.. .. .|+.++. +.+...............+....+|.|++... ..+..||+++++
T Consensus 407 ~~v~~i~~d~~g~lWigt~---~~--Gl~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lwigt~-~Gl~~~~~~~~~ 480 (781)
T 3v9f_A 407 NSVLCSLKDSEGNLWFGTY---LG--NISYYNTRLKKFQIIELEKNELLDVRVFYEDKNKKIWIGTH-AGVFVIDLASKK 480 (781)
T ss_dssp SBEEEEEECTTSCEEEEET---TE--EEEEECSSSCEEEECCSTTTCCCCEEEEEECTTSEEEEEET-TEEEEEESSSSS
T ss_pred cceEEEEECCCCCEEEEec---cC--CEEEEcCCCCcEEEeccCCCCCCeEEEEEECCCCCEEEEEC-CceEEEeCCCCe
Confidence 11 334443 677766432 12 3445544 43332210011111122233334577888765 789999999887
Q ss_pred EEEe
Q 045569 332 MRDL 335 (362)
Q Consensus 332 ~~~v 335 (362)
++.+
T Consensus 481 ~~~~ 484 (781)
T 3v9f_A 481 VIHH 484 (781)
T ss_dssp CCEE
T ss_pred EEec
Confidence 7554
No 161
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=51.92 E-value=1e+02 Score=25.65 Aligned_cols=29 Identities=14% Similarity=0.070 Sum_probs=16.7
Q ss_pred CceEEEEeeccCCCccEEEEEEcCCceeeeecCC
Q 045569 217 DGVCYWLSEFRDNDHKVILSFHLGNEVFEEIQEP 250 (362)
Q Consensus 217 ~G~lywl~~~~~~~~~~il~fD~~~e~~~~i~~P 250 (362)
+|.+|.-... ..|.+||...+......++
T Consensus 147 ~g~l~vgt~~-----~~l~~~d~~g~~~~~~~~~ 175 (330)
T 3hxj_A 147 DGTIYVGSND-----NYLYAINPDGTEKWRFKTN 175 (330)
T ss_dssp TSCEEEECTT-----SEEEEECTTSCEEEEEECS
T ss_pred CCEEEEEcCC-----CEEEEECCCCCEeEEEecC
Confidence 6776554432 3799999984433334443
No 162
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=51.16 E-value=1.1e+02 Score=25.86 Aligned_cols=175 Identities=10% Similarity=0.035 Sum_probs=85.9
Q ss_pred EEEEeCCCcccccC-CCCCcCCCCcccceeeeeeeeecCCCCCeEEEEEEEEeecccccccCcceEEEEECCCC---Cc-
Q 045569 120 ITLWNRATKESRVL-PKCTTVFPKYTSIFCKCTGFGLDPMSTDYKLVLIFTLWNEKLDLLYEFSHVAVYSLSTN---SW- 194 (362)
Q Consensus 120 ~~V~NP~T~~~~~L-P~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~eVyss~~~---~W- 194 (362)
+.+.++.+++...+ |.. .. ..|+.+|+..+. +...- .. ...+..++..+. +-
T Consensus 12 I~~i~~~~~~~~~~~~~~-----~~------p~g~~~d~~~~~--ly~~D--~~--------~~~I~~~~~~g~~~~~~~ 68 (316)
T 1ijq_A 12 VRKMTLDRSEYTSLIPNL-----RN------VVALDTEVASNR--IYWSD--LS--------QRMICSTQLDRAHGVSSY 68 (316)
T ss_dssp EEEEETTSCCCEEEECSC-----SS------EEEEEEETTTTE--EEEEE--TT--------TTEEEEEEC--------C
T ss_pred EEEEECCCcceEehhcCC-----Cc------eEEEEEEeCCCE--EEEEE--CC--------CCcEEEEECCCCCCCccc
Confidence 77778877765443 221 12 578888876553 22221 00 135666766551 21
Q ss_pred eecccCCCccccccCCcceEEE---CceEEEEeeccCCCccEEEEEEcCCceeeeecCCCCCCCCCcEEEE--ECCeEEE
Q 045569 195 RYCDCFKSNHYYMDGAFDSVYL---DGVCYWLSEFRDNDHKVILSFHLGNEVFEEIQEPYIPESTPTILGI--YNHSLCL 269 (362)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~v~~---~G~lywl~~~~~~~~~~il~fD~~~e~~~~i~~P~~~~~~~~~l~~--~~g~L~l 269 (362)
..+-. .... ...++.+ +|.+||..... ..|..+|+....-..+- ..... ....++. .+|.|++
T Consensus 69 ~~~~~--~~~~----~p~glavd~~~~~ly~~d~~~----~~I~~~~~~g~~~~~~~-~~~~~-~P~~iavdp~~g~ly~ 136 (316)
T 1ijq_A 69 DTVIS--RDIQ----APDGLAVDWIHSNIYWTDSVL----GTVSVADTKGVKRKTLF-RENGS-KPRAIVVDPVHGFMYW 136 (316)
T ss_dssp EEEEC--SSCS----CCCEEEEETTTTEEEEEETTT----TEEEEEETTSSSEEEEE-ECTTC-CEEEEEEETTTTEEEE
T ss_pred EEEEe--CCCC----CcCEEEEeecCCeEEEEECCC----CEEEEEeCCCCceEEEE-ECCCC-CcceEEeCCCCCEEEE
Confidence 11110 0111 1334443 68999987653 47999999865443331 11111 1134444 3677877
Q ss_pred EEEcCCCCeEEEEEeeC-CeeEEEEEeCCCCCceee--EEEee-CCcEEEEec-CCeEEEEeCCCCcEEEe
Q 045569 270 LLSHNIENYYDIWVMKY-KCWIKQLSLGPLNGVRTP--LGFWK-KGAFFVHST-NEQLLLYDPNTQEMRDL 335 (362)
Q Consensus 270 ~~~~~~~~~~~IW~l~~-~~W~~~~~i~~~~~~~~~--~~~~~-~g~il~~~~-~~~~~~yd~~~~~~~~v 335 (362)
.... ... .|++.+- ++-.+.. +. ..+..| +++.. ++.||+... ..++..+|++.+..+.+
T Consensus 137 ~d~~-~~~--~I~~~~~dG~~~~~~-~~--~~~~~P~gla~d~~~~~lY~~D~~~~~I~~~d~dg~~~~~~ 201 (316)
T 1ijq_A 137 TDWG-TPA--KIKKGGLNGVDIYSL-VT--ENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTI 201 (316)
T ss_dssp EECS-SSC--EEEEEETTSCCEEEE-EC--SSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEE
T ss_pred EccC-CCC--eEEEEcCCCCCeEEE-EE--CCCCCceEEEEeccCCEEEEEECCCCeEEEEecCCCceEEE
Confidence 6542 113 4555442 2222211 11 122334 34442 466777654 46799999987655544
No 163
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=51.01 E-value=1.2e+02 Score=26.12 Aligned_cols=96 Identities=10% Similarity=0.061 Sum_probs=52.0
Q ss_pred cEEEEEEcCCceee-eecCCCCCCCCCcEEEEE-CCeEEEEEEcCCCCeEEEEEeeCCeeEEEEEeCCCCCceeeEEEee
Q 045569 232 KVILSFHLGNEVFE-EIQEPYIPESTPTILGIY-NHSLCLLLSHNIENYYDIWVMKYKCWIKQLSLGPLNGVRTPLGFWK 309 (362)
Q Consensus 232 ~~il~fD~~~e~~~-~i~~P~~~~~~~~~l~~~-~g~L~l~~~~~~~~~~~IW~l~~~~W~~~~~i~~~~~~~~~~~~~~ 309 (362)
..|..+|+.+.+.. .+..... ....+... +|.+.+++. ....+.||.++...- ...+.........+.+..
T Consensus 227 g~i~~~d~~~~~~~~~~~~~~~---~i~~~~~~~~~~~l~~~~--~d~~i~i~d~~~~~~--~~~~~~~~~~i~~~~~~~ 299 (425)
T 1r5m_A 227 GAIFVYQITEKTPTGKLIGHHG---PISVLEFNDTNKLLLSAS--DDGTLRIWHGGNGNS--QNCFYGHSQSIVSASWVG 299 (425)
T ss_dssp GCEEEEETTCSSCSEEECCCSS---CEEEEEEETTTTEEEEEE--TTSCEEEECSSSBSC--SEEECCCSSCEEEEEEET
T ss_pred CeEEEEEcCCCceeeeeccCCC---ceEEEEECCCCCEEEEEc--CCCEEEEEECCCCcc--ceEecCCCccEEEEEECC
Confidence 37889998875432 2221111 10233333 555555554 457899998876221 222322222223444555
Q ss_pred CCcEEEEecCCeEEEEeCCCCcEEE
Q 045569 310 KGAFFVHSTNEQLLLYDPNTQEMRD 334 (362)
Q Consensus 310 ~g~il~~~~~~~~~~yd~~~~~~~~ 334 (362)
++.++....++.+..||+++++...
T Consensus 300 ~~~l~~~~~d~~i~i~d~~~~~~~~ 324 (425)
T 1r5m_A 300 DDKVISCSMDGSVRLWSLKQNTLLA 324 (425)
T ss_dssp TTEEEEEETTSEEEEEETTTTEEEE
T ss_pred CCEEEEEeCCCcEEEEECCCCcEeE
Confidence 6644444558889999998876543
No 164
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=51.01 E-value=1.8e+02 Score=28.12 Aligned_cols=112 Identities=14% Similarity=0.149 Sum_probs=61.7
Q ss_pred CceEEEEeeccCCCccEEEEEEcCC--ceeeeecCCCCCCCCCcEEEEECCeEEEEEEcCCCCeEEEEEeeC-CeeEEEE
Q 045569 217 DGVCYWLSEFRDNDHKVILSFHLGN--EVFEEIQEPYIPESTPTILGIYNHSLCLLLSHNIENYYDIWVMKY-KCWIKQL 293 (362)
Q Consensus 217 ~G~lywl~~~~~~~~~~il~fD~~~--e~~~~i~~P~~~~~~~~~l~~~~g~L~l~~~~~~~~~~~IW~l~~-~~W~~~~ 293 (362)
++.+|+..... .....|...|+.+ +.|+.+- |..... ...+...++.|.+.... .....||+++- +. ...
T Consensus 327 g~~l~~~s~~~-~~~~~l~~~d~~~~~~~~~~l~-~~~~~~-l~~~~~~~~~lv~~~~~--dg~~~l~~~~~~g~--~~~ 399 (741)
T 1yr2_A 327 GDQLWFVSGDG-APLKKIVRVDLSGSTPRFDTVV-PESKDN-LESVGIAGNRLFASYIH--DAKSQVLAFDLDGK--PAG 399 (741)
T ss_dssp TTEEEEEECTT-CTTCEEEEEECSSSSCEEEEEE-CCCSSE-EEEEEEEBTEEEEEEEE--TTEEEEEEEETTSC--EEE
T ss_pred CCEEEEEECCC-CCCCEEEEEeCCCCccccEEEe-cCCCCe-EEEEEEECCEEEEEEEE--CCEEEEEEEeCCCC--cee
Confidence 44677776542 2256799999988 5776653 332111 02234457787766653 45678888873 32 233
Q ss_pred EeCCC-CCceeeEEEeeCC-cEEEEec----CCeEEEEeCCCCcEEEe
Q 045569 294 SLGPL-NGVRTPLGFWKKG-AFFVHST----NEQLLLYDPNTQEMRDL 335 (362)
Q Consensus 294 ~i~~~-~~~~~~~~~~~~g-~il~~~~----~~~~~~yd~~~~~~~~v 335 (362)
.+... ......+....++ .+++... ...++.||+.+++.+.+
T Consensus 400 ~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~~~~l 447 (741)
T 1yr2_A 400 AVSLPGIGSASGLSGRPGDRHAYLSFSSFTQPATVLALDPATAKTTPW 447 (741)
T ss_dssp ECBCSSSCEEEEEECCBTCSCEEEEEEETTEEEEEEEEETTTTEEEEC
T ss_pred eccCCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCCcEEEE
Confidence 44421 1111222222344 4555433 35799999998876554
No 165
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=50.10 E-value=1.1e+02 Score=25.56 Aligned_cols=69 Identities=9% Similarity=0.078 Sum_probs=40.4
Q ss_pred CCeEEEEEEcCCCCeEEEEEeeCCeeEEEEEeCCCCCceeeEEEee--CCcEEEEe-cCCeEEEEeCCCCcEEE
Q 045569 264 NHSLCLLLSHNIENYYDIWVMKYKCWIKQLSLGPLNGVRTPLGFWK--KGAFFVHS-TNEQLLLYDPNTQEMRD 334 (362)
Q Consensus 264 ~g~L~l~~~~~~~~~~~IW~l~~~~W~~~~~i~~~~~~~~~~~~~~--~g~il~~~-~~~~~~~yd~~~~~~~~ 334 (362)
+|++.+.+. ....+.||-++.........+.........+.+.. ++.+++.. .++.+..||+++++++.
T Consensus 24 ~g~~lasgs--~D~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~iWd~~~~~~~~ 95 (316)
T 3bg1_A 24 YGTRLATCS--SDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWREENGTWEK 95 (316)
T ss_dssp GGCEEEEEE--TTTEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEETTSCEEEECCSSSCCCE
T ss_pred CCCEEEEEe--CCCeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECCCEEEEEECCCCcceE
Confidence 566555454 46799999998754444444432212122333322 35555544 47889999999876543
No 166
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=49.98 E-value=1.1e+02 Score=25.22 Aligned_cols=59 Identities=14% Similarity=0.276 Sum_probs=38.4
Q ss_pred CCeEEEEEeeCCeeEEEEEeCCCCCceeeEEEeeCCcEEEEe-cCCeEEEEeCCCCcEEE
Q 045569 276 ENYYDIWVMKYKCWIKQLSLGPLNGVRTPLGFWKKGAFFVHS-TNEQLLLYDPNTQEMRD 334 (362)
Q Consensus 276 ~~~~~IW~l~~~~W~~~~~i~~~~~~~~~~~~~~~g~il~~~-~~~~~~~yd~~~~~~~~ 334 (362)
...+.||-++.+.-.+.............+.+..+|+.++.. .++.+..||.++++...
T Consensus 44 D~tV~iWd~~tg~~~~~~~~~~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~~~~~ 103 (318)
T 4ggc_A 44 DNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLR 103 (318)
T ss_dssp TTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEE
T ss_pred CCEEEEEECCCCCEEEEEEecCCCCeEEEEEECCCCCEEEEEECCCcEEEeecCCceeEE
Confidence 468999988775545544443222223445566677776654 47889999999887543
No 167
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=48.87 E-value=1.1e+02 Score=25.03 Aligned_cols=95 Identities=7% Similarity=0.045 Sum_probs=54.7
Q ss_pred cEEEEEEcCCcee-eeecCCCCCCCCCcEEEEE-CCeEEEEEEcCCCCeEEEEEeeCCeeEEEEEeCCCCCceeeEEEee
Q 045569 232 KVILSFHLGNEVF-EEIQEPYIPESTPTILGIY-NHSLCLLLSHNIENYYDIWVMKYKCWIKQLSLGPLNGVRTPLGFWK 309 (362)
Q Consensus 232 ~~il~fD~~~e~~-~~i~~P~~~~~~~~~l~~~-~g~L~l~~~~~~~~~~~IW~l~~~~W~~~~~i~~~~~~~~~~~~~~ 309 (362)
..|..+|+.+.+. ..+...... ...+... +|.|. ++. ....+.||-++...-... +.........+.+..
T Consensus 205 g~i~i~d~~~~~~~~~~~~~~~~---i~~~~~~~~~~l~-~~~--~dg~v~iwd~~~~~~~~~--~~~~~~~i~~~~~~~ 276 (313)
T 3odt_A 205 GLIKLVDMHTGDVLRTYEGHESF---VYCIKLLPNGDIV-SCG--EDRTVRIWSKENGSLKQV--ITLPAISIWSVDCMS 276 (313)
T ss_dssp SEEEEEETTTCCEEEEEECCSSC---EEEEEECTTSCEE-EEE--TTSEEEEECTTTCCEEEE--EECSSSCEEEEEECT
T ss_pred CeEEEEECCchhhhhhhhcCCce---EEEEEEecCCCEE-EEe--cCCEEEEEECCCCceeEE--EeccCceEEEEEEcc
Confidence 4789999886543 233322111 0233333 45433 332 467899999877433333 322222233455556
Q ss_pred CCcEEEEecCCeEEEEeCCCCcEEE
Q 045569 310 KGAFFVHSTNEQLLLYDPNTQEMRD 334 (362)
Q Consensus 310 ~g~il~~~~~~~~~~yd~~~~~~~~ 334 (362)
++.++....++.+..||++++++..
T Consensus 277 ~~~~~~~~~dg~i~iw~~~~~~~~~ 301 (313)
T 3odt_A 277 NGDIIVGSSDNLVRIFSQEKSRWAS 301 (313)
T ss_dssp TSCEEEEETTSCEEEEESCGGGCCC
T ss_pred CCCEEEEeCCCcEEEEeCCCCceee
Confidence 7787776678899999999877643
No 168
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=47.97 E-value=2e+02 Score=27.77 Aligned_cols=182 Identities=9% Similarity=0.132 Sum_probs=86.0
Q ss_pred EEEeecCceEEEEeCCCccccc-CCCCCcCCCCcccceeeeeeeeecCCCCCeEEEEEEEEeecccccccCcceEEEEEC
Q 045569 111 FCIFGNNNRITLWNRATKESRV-LPKCTTVFPKYTSIFCKCTGFGLDPMSTDYKLVLIFTLWNEKLDLLYEFSHVAVYSL 189 (362)
Q Consensus 111 l~~~~~~~~~~V~NP~T~~~~~-LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~eVyss 189 (362)
|...+.++.+.|||..+++... +.... .. ..++.+.|.. .+ +.... . ...+.||+.
T Consensus 28 la~~~~~g~v~iwd~~~~~~~~~~~~~~----~~------v~~~~~s~~~-~~--l~~~~--~--------dg~i~vw~~ 84 (814)
T 3mkq_A 28 VLTTLYSGRVEIWNYETQVEVRSIQVTE----TP------VRAGKFIARK-NW--IIVGS--D--------DFRIRVFNY 84 (814)
T ss_dssp EEEEETTSEEEEEETTTTEEEEEEECCS----SC------EEEEEEEGGG-TE--EEEEE--T--------TSEEEEEET
T ss_pred EEEEeCCCEEEEEECCCCceEEEEecCC----Cc------EEEEEEeCCC-CE--EEEEe--C--------CCeEEEEEC
Confidence 3333555678999988876443 22111 11 4556666632 22 22221 1 135889998
Q ss_pred CCCCceec-ccCCCccccccCCcceEE--ECceEEEEeeccCCCccEEEEEEcCCc-eeee-ecCCCCCCCCCcEEEEE-
Q 045569 190 STNSWRYC-DCFKSNHYYMDGAFDSVY--LDGVCYWLSEFRDNDHKVILSFHLGNE-VFEE-IQEPYIPESTPTILGIY- 263 (362)
Q Consensus 190 ~~~~W~~~-~~~~~~~~~~~~~~~~v~--~~G~lywl~~~~~~~~~~il~fD~~~e-~~~~-i~~P~~~~~~~~~l~~~- 263 (362)
.++..... ..... . -..+. -+|..-..... ...|..+|+.++ .... +.... .....+...
T Consensus 85 ~~~~~~~~~~~~~~--~-----v~~~~~s~~~~~l~~~~~----dg~i~vw~~~~~~~~~~~~~~~~---~~v~~~~~~p 150 (814)
T 3mkq_A 85 NTGEKVVDFEAHPD--Y-----IRSIAVHPTKPYVLSGSD----DLTVKLWNWENNWALEQTFEGHE---HFVMCVAFNP 150 (814)
T ss_dssp TTCCEEEEEECCSS--C-----EEEEEECSSSSEEEEEET----TSEEEEEEGGGTSEEEEEEECCS---SCEEEEEEET
T ss_pred CCCcEEEEEecCCC--C-----EEEEEEeCCCCEEEEEcC----CCEEEEEECCCCceEEEEEcCCC---CcEEEEEEEc
Confidence 88754322 11111 0 11111 13332222222 347888888765 3222 22111 110233333
Q ss_pred -CCeEEEEEEcCCCCeEEEEEeeCCeeEEEEEeCCCCCceeeEEEee--CCcEEEEe-cCCeEEEEeCCCCcE
Q 045569 264 -NHSLCLLLSHNIENYYDIWVMKYKCWIKQLSLGPLNGVRTPLGFWK--KGAFFVHS-TNEQLLLYDPNTQEM 332 (362)
Q Consensus 264 -~g~L~l~~~~~~~~~~~IW~l~~~~W~~~~~i~~~~~~~~~~~~~~--~g~il~~~-~~~~~~~yd~~~~~~ 332 (362)
+|.+.+++. ....+.+|-++...-........... ...+.+.. ++..++.. .++.+..||.++++.
T Consensus 151 ~~~~~l~~~~--~dg~v~vwd~~~~~~~~~~~~~~~~~-v~~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~ 220 (814)
T 3mkq_A 151 KDPSTFASGC--LDRTVKVWSLGQSTPNFTLTTGQERG-VNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSC 220 (814)
T ss_dssp TEEEEEEEEE--TTSEEEEEETTCSSCSEEEECCCTTC-CCEEEECCSTTCCEEEEECTTSEEEEEETTTTEE
T ss_pred CCCCEEEEEe--CCCeEEEEECCCCcceeEEecCCCCC-EEEEEEEECCCCCEEEEEeCCCEEEEEECCCCcE
Confidence 345555444 45789999987622111111111111 12333333 56555554 477899999988764
No 169
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=47.41 E-value=1.2e+02 Score=25.28 Aligned_cols=96 Identities=10% Similarity=-0.002 Sum_probs=50.7
Q ss_pred cEEEEEEcCCceee-eec---CCCCCCCCCcEEEEE-CCe-EEEEEEcCCCCeEEEEEeeC-----------------Ce
Q 045569 232 KVILSFHLGNEVFE-EIQ---EPYIPESTPTILGIY-NHS-LCLLLSHNIENYYDIWVMKY-----------------KC 288 (362)
Q Consensus 232 ~~il~fD~~~e~~~-~i~---~P~~~~~~~~~l~~~-~g~-L~l~~~~~~~~~~~IW~l~~-----------------~~ 288 (362)
..|..+|+.+.+-. .+. +.... .....+... +|. +.+.+. ....+.||.++. ..
T Consensus 234 g~i~i~d~~~~~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~~l~~~~--~dg~i~iwd~~~~~~~~~~~~~g~~~~~~~~ 310 (357)
T 3i2n_A 234 GKFHVFDMRTQHPTKGFASVSEKAHK-STVWQVRHLPQNRELFLTAG--GAGGLHLWKYEYPIQRSKKDSEGIEMGVAGS 310 (357)
T ss_dssp TEEEEEEEEEEETTTEEEEEEEECCS-SCEEEEEEETTEEEEEEEEE--TTSEEEEEEEECCSCC--CCTTSCCCCCCCE
T ss_pred CeEEEEeCcCCCcccceeeeccCCCc-CCEEEEEECCCCCcEEEEEe--CCCcEEEeecCCCcccccccCCCCccccccc
Confidence 36778887654321 111 11111 111233333 455 444443 467999999985 13
Q ss_pred eEEEEEeCCCCCceeeEEEeeCCcEEE-E-ecCCeEEEEeCCCC
Q 045569 289 WIKQLSLGPLNGVRTPLGFWKKGAFFV-H-STNEQLLLYDPNTQ 330 (362)
Q Consensus 289 W~~~~~i~~~~~~~~~~~~~~~g~il~-~-~~~~~~~~yd~~~~ 330 (362)
+.....+.........+.+..+|..++ . ..++.+..||+++.
T Consensus 311 ~~~~~~~~~~~~~v~~~~~s~~~~~l~~s~~~d~~i~iw~~~~~ 354 (357)
T 3i2n_A 311 VSLLQNVTLSTQPISSLDWSPDKRGLCVCSSFDQTVRVLIVTKL 354 (357)
T ss_dssp EEEEEEEECCSSCEEEEEECSSSTTEEEEEETTSEEEEEEECC-
T ss_pred cceeeccccCCCCeeEEEEcCCCCeEEEEecCCCcEEEEECCCc
Confidence 455555543322233455556776655 3 44788999998764
No 170
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=47.36 E-value=1.5e+02 Score=26.20 Aligned_cols=156 Identities=12% Similarity=-0.007 Sum_probs=78.7
Q ss_pred eeeeeecCCCCCeEEEEEEEEeecccccccCcceEEEEECCCCCceecccCCCccccccCCcceEEE---CceEEEEeec
Q 045569 150 CTGFGLDPMSTDYKLVLIFTLWNEKLDLLYEFSHVAVYSLSTNSWRYCDCFKSNHYYMDGAFDSVYL---DGVCYWLSEF 226 (362)
Q Consensus 150 ~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~eVyss~~~~W~~~~~~~~~~~~~~~~~~~v~~---~G~lywl~~~ 226 (362)
..|+++|...+.-. ..- . . ...+++++..+..-+.+-... +. ...++.+ +|.|||....
T Consensus 161 p~glavD~~~~~lY--~~d---~-~------~~~I~~~~~~g~~~~~l~~~~--~~----~P~~iavdp~~g~ly~td~~ 222 (400)
T 3p5b_L 161 PDGLAVDWIHSNIY--WTD---S-V------LGTVSVADTKGVKRKTLFREN--GS----KPRAIVVDPVHGFMYWTDWG 222 (400)
T ss_dssp EEEEEEETTTTEEE--EEE---T-T------TTEEEEECTTTCSEEEEEECS--SC----CEEEEEEETTTTEEEEEECS
T ss_pred cccEEEEecCCceE--EEE---C-C------CCeEEEEeCCCCceEEEEeCC--CC----CcceEEEecccCeEEEEeCC
Confidence 56888887554322 221 0 0 235778887765444332211 11 1334444 6899998754
Q ss_pred cCCCccEEEEEEcCCceeeeecCCCCCCCCCcEEEEE--CCeEEEEEEcCCCCeEEEEEeeCCeeEEEEEeCCCCCceee
Q 045569 227 RDNDHKVILSFHLGNEVFEEIQEPYIPESTPTILGIY--NHSLCLLLSHNIENYYDIWVMKYKCWIKQLSLGPLNGVRTP 304 (362)
Q Consensus 227 ~~~~~~~il~fD~~~e~~~~i~~P~~~~~~~~~l~~~--~g~L~l~~~~~~~~~~~IW~l~~~~W~~~~~i~~~~~~~~~ 304 (362)
. ...|..+|+....-..+-. .... ...-|+.. +++|+++... ...|...-++...=..+. .....+..|
T Consensus 223 ~---~~~I~~~~~dG~~~~~~~~-~~l~-~P~glavd~~~~~lY~aD~~--~~~I~~~d~dG~~~~~~~--~~~~~l~~P 293 (400)
T 3p5b_L 223 T---PAKIKKGGLNGVDIYSLVT-ENIQ-WPNGITLDLLSGRLYWVDSK--LHSISSIDVNGGNRKTIL--EDEKRLAHP 293 (400)
T ss_dssp S---SCCEEEEETTSCSCEEEEC-SSCS-CEEEEEEETTTTEEEEEETT--TTEEEEEETTSCCCEEEE--ECSSTTSSE
T ss_pred C---CCEEEEEeCCCCccEEEEE-CCCC-ceEEEEEEeCCCEEEEEECC--CCEEEEEeCCCCccEEEE--eCCCCCCCC
Confidence 3 2479999987644333211 1111 11334443 6788887652 344333333332111111 111223456
Q ss_pred EEEe-eCCcEEEEec-CCeEEEEeCCCCcE
Q 045569 305 LGFW-KKGAFFVHST-NEQLLLYDPNTQEM 332 (362)
Q Consensus 305 ~~~~-~~g~il~~~~-~~~~~~yd~~~~~~ 332 (362)
.++. .++.+|+... .+.+..+|..+++.
T Consensus 294 ~gl~v~~~~lywtd~~~~~V~~~~~~~G~~ 323 (400)
T 3p5b_L 294 FSLAVFEDKVFWTDIINEAIFSANRLTGSD 323 (400)
T ss_dssp EEEEEETTEEEEEESSSCSEEEEESSSCCC
T ss_pred EEEEEeCCEEEEecCCCCeEEEEEcCCCCc
Confidence 5554 3456766653 56799999766543
No 171
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=46.78 E-value=2e+02 Score=27.52 Aligned_cols=142 Identities=9% Similarity=0.062 Sum_probs=73.9
Q ss_pred ceEEEEECCCC--CceecccCCCccccccCCcceE-EECceEEEEeeccCCCccEEEEEEcCCc---eeeeecCCCCCCC
Q 045569 182 SHVAVYSLSTN--SWRYCDCFKSNHYYMDGAFDSV-YLDGVCYWLSEFRDNDHKVILSFHLGNE---VFEEIQEPYIPES 255 (362)
Q Consensus 182 ~~~eVyss~~~--~W~~~~~~~~~~~~~~~~~~~v-~~~G~lywl~~~~~~~~~~il~fD~~~e---~~~~i~~P~~~~~ 255 (362)
.++.+++..++ .|+.+....... ...+ .-++.+|.++..+ .....|+..|+.+. .|+.+ .|.....
T Consensus 259 ~~i~~~d~~~~~~~~~~l~~~~~~~------~~~~~~~g~~l~~~t~~~-~~~~~l~~~d~~~~~~~~~~~l-~~~~~~~ 330 (693)
T 3iuj_A 259 NRLYVKDLSQENAPLLTVQGDLDAD------VSLVDNKGSTLYLLTNRD-APNRRLVTVDAANPGPAHWRDL-IPERQQV 330 (693)
T ss_dssp CEEEEEETTSTTCCCEEEECSSSSC------EEEEEEETTEEEEEECTT-CTTCEEEEEETTSCCGGGCEEE-ECCCSSC
T ss_pred cEEEEEECCCCCCceEEEeCCCCce------EEEEeccCCEEEEEECCC-CCCCEEEEEeCCCCCccccEEE-ecCCCCE
Confidence 36788887665 677765432111 1223 3456788887643 22568999999863 35543 2222111
Q ss_pred CCcEEEEECCeEEEEEEcCCCCeEEEEEeeCCeeEEEEEeCCCC-CceeeEEEe-eCCcEEEEec----CCeEEEEeCCC
Q 045569 256 TPTILGIYNHSLCLLLSHNIENYYDIWVMKYKCWIKQLSLGPLN-GVRTPLGFW-KKGAFFVHST----NEQLLLYDPNT 329 (362)
Q Consensus 256 ~~~~l~~~~g~L~l~~~~~~~~~~~IW~l~~~~W~~~~~i~~~~-~~~~~~~~~-~~g~il~~~~----~~~~~~yd~~~ 329 (362)
......++.|.+.........+.+|-++ +.+.+ .+.... .....+... .++.+++... ...++.||+++
T Consensus 331 --~~~s~~g~~lv~~~~~~g~~~l~~~d~~-g~~~~--~l~~p~~~~~~~~~~~~d~~~l~~~~ss~~tP~~l~~~d~~~ 405 (693)
T 3iuj_A 331 --LTVHSGSGYLFAEYMVDATARVEQFDYE-GKRVR--EVALPGLGSVSGFNGKHDDPALYFGFENYAQPPTLYRFEPKS 405 (693)
T ss_dssp --EEEEEETTEEEEEEEETTEEEEEEECTT-SCEEE--EECCSSSSEEEECCCCTTCSCEEEEEECSSSCCEEEEECTTT
T ss_pred --EEEEEECCEEEEEEEECCeeEEEEEECC-CCeeE--EeecCCCceEEeeecCCCCCEEEEEecCCCCCCEEEEEECCC
Confidence 2334456667666554333345555443 33333 333211 111111111 2345666544 36899999998
Q ss_pred CcEEEee
Q 045569 330 QEMRDLG 336 (362)
Q Consensus 330 ~~~~~v~ 336 (362)
++.+.+.
T Consensus 406 g~~~~l~ 412 (693)
T 3iuj_A 406 GAISLYR 412 (693)
T ss_dssp CCEEEEE
T ss_pred CeEEEEE
Confidence 8776554
No 172
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=46.05 E-value=3.5 Score=36.62 Aligned_cols=28 Identities=0% Similarity=-0.165 Sum_probs=17.4
Q ss_pred cceEEECceEEEEeeccCCCccEEEEEEcCCce
Q 045569 211 FDSVYLDGVCYWLSEFRDNDHKVILSFHLGNEV 243 (362)
Q Consensus 211 ~~~v~~~G~lywl~~~~~~~~~~il~fD~~~e~ 243 (362)
..++..+|.+|.-...+ .|.++|..+.+
T Consensus 3 ssP~v~~~~v~~gs~dg-----~v~a~d~~tG~ 30 (369)
T 2hz6_A 3 STVTLPETLLFVSTLDG-----SLHAVSKRTGS 30 (369)
T ss_dssp -----CTTEEEEEETTS-----EEEEEETTTCC
T ss_pred CCCeeeCCEEEEEcCCC-----EEEEEECCCCC
Confidence 45566788888876554 79999987643
No 173
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=46.01 E-value=1.6e+02 Score=28.01 Aligned_cols=112 Identities=13% Similarity=0.061 Sum_probs=58.4
Q ss_pred cceEEECceEEEEee-ccCCCccEEEEEEc-CC--ceeeee-cCCCC-----C-CCCCcEEEE--ECCe----EEEEEEc
Q 045569 211 FDSVYLDGVCYWLSE-FRDNDHKVILSFHL-GN--EVFEEI-QEPYI-----P-ESTPTILGI--YNHS----LCLLLSH 273 (362)
Q Consensus 211 ~~~v~~~G~lywl~~-~~~~~~~~il~fD~-~~--e~~~~i-~~P~~-----~-~~~~~~l~~--~~g~----L~l~~~~ 273 (362)
..++..+|.+|.... .. .+.++|. .+ +.|+.- ..+.. . ......++. .+|+ +++...
T Consensus 56 ~tP~v~~g~vyv~~~~~~-----~v~AlD~~~tG~~lW~~~~~~~~~~~~~~~~~~~~~g~av~p~~g~~~~rV~v~t~- 129 (599)
T 1w6s_A 56 GAPLVVDGKMYIHTSFPN-----NTFALGLDDPGTILWQDKPKQNPAARAVACCDLVNRGLAYWPGDGKTPALILKTQL- 129 (599)
T ss_dssp SCCEEETTEEEEECSTTT-----CEEEEETTCTTSEEEEECCCCCGGGGGGCSSCSCCCCCEEECCCSSSCCEEEEECT-
T ss_pred eccEEECCEEEEEeCCCC-----EEEEEeCCCCCcEEEEECCCCCccccccccccccccceEEEecCCcceeEEEEEcC-
Confidence 566888999999876 43 6999998 54 456542 22110 0 000012333 4555 654332
Q ss_pred CCCCeEEEEEeeC----CeeEEEEEeC-CC-CCceeeEEEeeCCcEEEEec------CCeEEEEeCCCCcEEE
Q 045569 274 NIENYYDIWVMKY----KCWIKQLSLG-PL-NGVRTPLGFWKKGAFFVHST------NEQLLLYDPNTQEMRD 334 (362)
Q Consensus 274 ~~~~~~~IW~l~~----~~W~~~~~i~-~~-~~~~~~~~~~~~g~il~~~~------~~~~~~yd~~~~~~~~ 334 (362)
.. .+..++- ..|.....-. .. .....|+. .++.|++... ++.+..||.+|++..+
T Consensus 130 --dg--~l~AlDa~TG~~~W~~~~~~~~~~~~~~ssP~v--~~g~V~vg~~g~e~g~~g~v~A~D~~TG~~~W 196 (599)
T 1w6s_A 130 --DG--NVAALNAETGETVWKVENSDIKVGSTLTIAPYV--VKDKVIIGSSGAELGVRGYLTAYDVKTGEQVW 196 (599)
T ss_dssp --TS--EEEEEETTTCCEEEEEECCCGGGTCBCCSCCEE--ETTEEEECCBCGGGTCCCEEEEEETTTCCEEE
T ss_pred --CC--EEEEEECCCCCEEEeecCCCCCccceeecCCEE--ECCEEEEEecccccCCCCeEEEEECCCCcEEE
Confidence 12 2334432 4566432110 00 11123443 2566666442 5789999999988654
No 174
>1i2h_A PSD-ZIP45(homer-1C/VESL-1L); enabled VAsp homology 1 domain, signaling protein; 1.80A {Rattus norvegicus} SCOP: b.55.1.4
Probab=45.99 E-value=36 Score=26.35 Aligned_cols=39 Identities=13% Similarity=0.117 Sum_probs=28.0
Q ss_pred eEEEEeCCCc-ccccCCCCCcCCCCcccceeeeeeeeecCCCCCeEEEEEE
Q 045569 119 RITLWNRATK-ESRVLPKCTTVFPKYTSIFCKCTGFGLDPMSTDYKLVLIF 168 (362)
Q Consensus 119 ~~~V~NP~T~-~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~ 168 (362)
.+++.||.|+ .|+..-... . .+.+-+|...+.|+|+.+.
T Consensus 17 ~Vm~~D~~tk~~WvP~g~~~-----~------~V~i~~d~~rnsyRIvg~~ 56 (168)
T 1i2h_A 17 HVFQIDPNTKKNWVPTSKHA-----V------TVSYFYDSTRNVYRIISLD 56 (168)
T ss_dssp EEEEECTTSSCCSEESCSSC-----E------EEEEEEETTTTEEEEEEEE
T ss_pred EEEEECCCCCCceeecCCCC-----e------EEEEEEcCCCCEEEEEEcc
Confidence 4889999997 895432221 1 4566789988899999864
No 175
>1evh_A WH1 domain, protein (MENA EVH1 domain); molecular recognition, actin dynamics, contractIle protein; 1.80A {Mus musculus} SCOP: b.55.1.4 PDB: 2xqn_M 2iyb_A
Probab=45.93 E-value=29 Score=24.82 Aligned_cols=41 Identities=10% Similarity=0.047 Sum_probs=28.9
Q ss_pred eEEEEeCCCcccccCCCCCcCCCCcccceeeeeeeeecCCCCCeEEEEEE
Q 045569 119 RITLWNRATKESRVLPKCTTVFPKYTSIFCKCTGFGLDPMSTDYKLVLIF 168 (362)
Q Consensus 119 ~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~ 168 (362)
.+++.+|.|++|. |.... .+ ...+.|..|...+.|+|+...
T Consensus 12 ~V~~~d~~~~~W~--p~~~~---~g----~s~V~~~~d~~~~~yrIv~~~ 52 (112)
T 1evh_A 12 AVMVYDDANKKWV--PAGGS---TG----FSRVHIYHHTGNNTFRVVGRK 52 (112)
T ss_dssp EEEEEETTTTEEE--EGGGC---CS----CEEEEEEEETTTTEEEEEEEE
T ss_pred EEEEEcCCCCceE--ECCCC---CC----ceEEEEEEECCCCEEEEEEEE
Confidence 4888999999774 43321 11 124788899888999999874
No 176
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=45.92 E-value=1.4e+02 Score=25.25 Aligned_cols=64 Identities=5% Similarity=0.051 Sum_probs=35.5
Q ss_pred CCeEEEEEEcCCCCeEEEEEeeCCeeEEEEEeCCCCC--ceeeEEEee--CCcEEEE-ecCCeEEEEeCCC
Q 045569 264 NHSLCLLLSHNIENYYDIWVMKYKCWIKQLSLGPLNG--VRTPLGFWK--KGAFFVH-STNEQLLLYDPNT 329 (362)
Q Consensus 264 ~g~L~l~~~~~~~~~~~IW~l~~~~W~~~~~i~~~~~--~~~~~~~~~--~g~il~~-~~~~~~~~yd~~~ 329 (362)
.+.+.+.+. ....+.||......|........... ....+.+.. ++.++.. ..++.+..||+++
T Consensus 260 ~~~~l~s~~--~dg~v~iw~~~~~~~~~~~~~~~~h~~~~v~~v~~~~~~~~~~las~s~Dg~v~~W~~~~ 328 (330)
T 2hes_X 260 FNGLIASVG--ADGVLAVYEEVDGEWKVFAKRALCHGVYEINVVKWLELNGKTILATGGDDGIVNFWSLEK 328 (330)
T ss_dssp TTSCEEEEE--TTSCEEEEEEETTEEEEEEEESCTTTTSCEEEEEEC-----CCEEEEETTSEEEEEEC--
T ss_pred CCCEEEEEe--CCCEEEEEEcCCCceEEEeccccccccceEEEEEEecCCCceEEEEecCCCcEEEEEecc
Confidence 444433333 46789999998888877665432111 123334433 4555554 4478899999865
No 177
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=45.24 E-value=1.3e+02 Score=24.98 Aligned_cols=71 Identities=14% Similarity=0.110 Sum_probs=42.2
Q ss_pred CCeEEEEEEcCCCCeEEEEEeeCCe-eE-EEEEeCCCCCceeeEEEeeCCc-EEEE-ecCCeEEEEeC-CCCcEEEeeE
Q 045569 264 NHSLCLLLSHNIENYYDIWVMKYKC-WI-KQLSLGPLNGVRTPLGFWKKGA-FFVH-STNEQLLLYDP-NTQEMRDLGR 337 (362)
Q Consensus 264 ~g~L~l~~~~~~~~~~~IW~l~~~~-W~-~~~~i~~~~~~~~~~~~~~~g~-il~~-~~~~~~~~yd~-~~~~~~~v~~ 337 (362)
+|.+.+++. ....+.||.++... -. ........ .....+.+..++. .++. ..++.+..||+ ++++...+.-
T Consensus 22 ~~~~l~~~~--~d~~v~iw~~~~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~ 97 (342)
T 1yfq_A 22 SKSLLLITS--WDGSLTVYKFDIQAKNVDLLQSLRYK-HPLLCCNFIDNTDLQIYVGTVQGEILKVDLIGSPSFQALTN 97 (342)
T ss_dssp GGTEEEEEE--TTSEEEEEEEETTTTEEEEEEEEECS-SCEEEEEEEESSSEEEEEEETTSCEEEECSSSSSSEEECBS
T ss_pred CCCEEEEEc--CCCeEEEEEeCCCCccccceeeeecC-CceEEEEECCCCCcEEEEEcCCCeEEEEEeccCCceEeccc
Confidence 555555554 45799999998822 11 12222222 2223445556777 5544 45788999999 8887766543
No 178
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=45.14 E-value=1.4e+02 Score=25.07 Aligned_cols=66 Identities=18% Similarity=0.191 Sum_probs=39.7
Q ss_pred eEEEEEEcCCCCeEEEEEeeC--Cee-EEEEEeCCCCCceeeEEEeeCCcEEEEe-cCCeEEEEeCCCCcEE
Q 045569 266 SLCLLLSHNIENYYDIWVMKY--KCW-IKQLSLGPLNGVRTPLGFWKKGAFFVHS-TNEQLLLYDPNTQEMR 333 (362)
Q Consensus 266 ~L~l~~~~~~~~~~~IW~l~~--~~W-~~~~~i~~~~~~~~~~~~~~~g~il~~~-~~~~~~~yd~~~~~~~ 333 (362)
.+.+.+. ....+.+|.+.. ... .....+.........+.+..+|..++.. .++.+.+||+++++..
T Consensus 31 ~~l~s~s--~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~v~~wd~~~~~~~ 100 (319)
T 3frx_A 31 NLLLSAS--RDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTADGAYALSASWDKTLRLWDVATGETY 100 (319)
T ss_dssp TEEEEEE--TTSEEEEEEEEEETTEEEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEE
T ss_pred cEEEEec--CCccEEEecCCCCCccccccceEEeCCcccEEEEEECCCCCEEEEEeCCCEEEEEECCCCCee
Confidence 4555555 467999999975 222 2233333222222344555677776654 4788999999987653
No 179
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=45.02 E-value=1.4e+02 Score=25.05 Aligned_cols=139 Identities=7% Similarity=-0.034 Sum_probs=72.3
Q ss_pred eEEEEECCCCCcee-cccCCCccccccCCcceEEECce-EEEEeeccCCCccEEEEEEcCCcee-eeecCCCCCCC--C-
Q 045569 183 HVAVYSLSTNSWRY-CDCFKSNHYYMDGAFDSVYLDGV-CYWLSEFRDNDHKVILSFHLGNEVF-EEIQEPYIPES--T- 256 (362)
Q Consensus 183 ~~eVyss~~~~W~~-~~~~~~~~~~~~~~~~~v~~~G~-lywl~~~~~~~~~~il~fD~~~e~~-~~i~~P~~~~~--~- 256 (362)
.+.+++..++.-.. +.... .+. .-.+.-+|. +|..... ...|..+|+.+.+. ..++.+..... .
T Consensus 70 ~v~~~d~~~~~~~~~~~~~~--~~~----~~~~s~dg~~l~v~~~~----~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~ 139 (353)
T 3vgz_A 70 VVYRLDPVTLEVTQAIHNDL--KPF----GATINNTTQTLWFGNTV----NSAVTAIDAKTGEVKGRLVLDDRKRTEEVR 139 (353)
T ss_dssp EEEEECTTTCCEEEEEEESS--CCC----SEEEETTTTEEEEEETT----TTEEEEEETTTCCEEEEEESCCCCCCSSCC
T ss_pred cEEEEcCCCCeEEEEEecCC--Ccc----eEEECCCCCEEEEEecC----CCEEEEEeCCCCeeEEEEecCCCccccccC
Confidence 57777777664221 11110 111 233445666 5544433 34799999987665 45666432211 0
Q ss_pred ---CcEEEE-ECCe-EEEEEEcCCCCeEEEEEeeCCeeEEEEEeCCCCCceeeEEEeeCCc-EEEEecCCeEEEEeCCCC
Q 045569 257 ---PTILGI-YNHS-LCLLLSHNIENYYDIWVMKYKCWIKQLSLGPLNGVRTPLGFWKKGA-FFVHSTNEQLLLYDPNTQ 330 (362)
Q Consensus 257 ---~~~l~~-~~g~-L~l~~~~~~~~~~~IW~l~~~~W~~~~~i~~~~~~~~~~~~~~~g~-il~~~~~~~~~~yd~~~~ 330 (362)
...+.. -+|+ |++.... ....+.+|-++. ......+.........+.+..+|+ +++...++.+..||++++
T Consensus 140 ~~~~~~~~~s~dg~~l~~~~~~-~~~~i~~~d~~~--~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~i~~~d~~~~ 216 (353)
T 3vgz_A 140 PLQPRELVADDATNTVYISGIG-KESVIWVVDGGN--IKLKTAIQNTGKMSTGLALDSEGKRLYTTNADGELITIDTADN 216 (353)
T ss_dssp CCEEEEEEEETTTTEEEEEEES-SSCEEEEEETTT--TEEEEEECCCCTTCCCCEEETTTTEEEEECTTSEEEEEETTTT
T ss_pred CCCCceEEECCCCCEEEEEecC-CCceEEEEcCCC--CceEEEecCCCCccceEEECCCCCEEEEEcCCCeEEEEECCCC
Confidence 022333 2555 5444432 345566665544 344455552222223445556666 455555778999999988
Q ss_pred cEEE
Q 045569 331 EMRD 334 (362)
Q Consensus 331 ~~~~ 334 (362)
+...
T Consensus 217 ~~~~ 220 (353)
T 3vgz_A 217 KILS 220 (353)
T ss_dssp EEEE
T ss_pred eEEE
Confidence 7653
No 180
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=44.86 E-value=1.5e+02 Score=25.41 Aligned_cols=196 Identities=10% Similarity=-0.005 Sum_probs=0.0
Q ss_pred ee----eeeee-EEEeecCceEEEEeCCC------cccccCCCCCcC---------CCCcccceeeeeeeeecCCCCCeE
Q 045569 104 VG----PYNGI-FCIFGNNNRITLWNRAT------KESRVLPKCTTV---------FPKYTSIFCKCTGFGLDPMSTDYK 163 (362)
Q Consensus 104 ~~----s~~GL-l~~~~~~~~~~V~NP~T------~~~~~LP~~~~~---------~~~~~~~~~~~~~~g~d~~~~~yk 163 (362)
.. ..+.+ |+..+.++.+.+||..+ ++.....+.... .... ...+.+++.. +-
T Consensus 129 ~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------i~~~~~~~~~--~l 200 (397)
T 1sq9_A 129 WGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQF------ATSVDISERG--LI 200 (397)
T ss_dssp EECCC----CEEEEEEETTSCEEEEEEESSSSHHHHTTTCCCCEEEEEEEECCSSSSCCC------CCEEEECTTS--EE
T ss_pred EeeccCCCCceEEEEEeCCCcEEEEeCCccccccccceeeccCcceeeeeeccccCCCCC------ceEEEECCCc--eE
Q ss_pred EEEEEEEeecccccccCcceEEEEECCCCCceecccC---C---CccccccCCcceEEECceEEEEeeccCCCc---cEE
Q 045569 164 LVLIFTLWNEKLDLLYEFSHVAVYSLSTNSWRYCDCF---K---SNHYYMDGAFDSVYLDGVCYWLSEFRDNDH---KVI 234 (362)
Q Consensus 164 Vv~~~~~~~~~~~~~~~~~~~eVyss~~~~W~~~~~~---~---~~~~~~~~~~~~v~~~G~lywl~~~~~~~~---~~i 234 (362)
++.-. ...+.+|+.+++.-...-.. . ..... .-...-+|.+...... . ..|
T Consensus 201 ~~~~~------------dg~i~i~d~~~~~~~~~~~~~~~h~~~~~~i~----~i~~~~~~~~l~~~~~----d~~~g~i 260 (397)
T 1sq9_A 201 ATGFN------------NGTVQISELSTLRPLYNFESQHSMINNSNSIR----SVKFSPQGSLLAIAHD----SNSFGCI 260 (397)
T ss_dssp EEECT------------TSEEEEEETTTTEEEEEEECCC---CCCCCEE----EEEECSSTTEEEEEEE----ETTEEEE
T ss_pred EEEeC------------CCcEEEEECCCCceeEEEeccccccccCCccc----eEEECCCCCEEEEEec----CCCCceE
Q ss_pred EEEEcCCcee-eeecCCC-----------CCCCCCcEEEEECCeEEEEEEcCCCCeEEEEEeeCCeeEEEEEeC------
Q 045569 235 LSFHLGNEVF-EEIQEPY-----------IPESTPTILGIYNHSLCLLLSHNIENYYDIWVMKYKCWIKQLSLG------ 296 (362)
Q Consensus 235 l~fD~~~e~~-~~i~~P~-----------~~~~~~~~l~~~~g~L~l~~~~~~~~~~~IW~l~~~~W~~~~~i~------ 296 (362)
..+|+.+.+. ..+..|. ............+|++.+++. ....+.||-+ ........+.
T Consensus 261 ~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~dg~i~iwd~--~~~~~~~~~~~~~~~~ 336 (397)
T 1sq9_A 261 TLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAG--WDGKLRFWDV--KTKERITTLNMHCDDI 336 (397)
T ss_dssp EEEETTTCCEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEE--TTSEEEEEET--TTTEEEEEEECCGGGC
T ss_pred EEEECCCCcccceeccCcccccccccccccCCcEEEEEECCCCCEEEEEe--CCCeEEEEEc--CCCceeEEEecccCcc
Q ss_pred CC---------------CCceeeEEEeeCC----------cEEEEec-CCeEEEEeCCCCc
Q 045569 297 PL---------------NGVRTPLGFWKKG----------AFFVHST-NEQLLLYDPNTQE 331 (362)
Q Consensus 297 ~~---------------~~~~~~~~~~~~g----------~il~~~~-~~~~~~yd~~~~~ 331 (362)
.. ......+.+..+| .+++... ++.+.+||+++++
T Consensus 337 ~~~~~~~~g~~~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~l~s~~~dg~i~iw~~~~g~ 397 (397)
T 1sq9_A 337 EIEEDILAVDEHGDSLAEPGVFDVKFLKKGWRSGMGADLNESLCCVCLDRSIRWFREAGGK 397 (397)
T ss_dssp SSGGGCCCBCTTSCBCSSCCEEEEEEECTTTSBSTTCTTSCEEEEEETTTEEEEEEEEC--
T ss_pred cchhhhhccccccccccCCceeEEEeccccccccccccccceEEEecCCCcEEEEEcCCCC
No 181
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=44.84 E-value=1.3e+02 Score=24.81 Aligned_cols=64 Identities=6% Similarity=0.191 Sum_probs=38.9
Q ss_pred CeEEEEEEcCCCCeEEEEEeeC--CeeEEEEEeCCCCCceeeEEEeeCC---cEEEEe-cCCeEEEEeCCCC
Q 045569 265 HSLCLLLSHNIENYYDIWVMKY--KCWIKQLSLGPLNGVRTPLGFWKKG---AFFVHS-TNEQLLLYDPNTQ 330 (362)
Q Consensus 265 g~L~l~~~~~~~~~~~IW~l~~--~~W~~~~~i~~~~~~~~~~~~~~~g---~il~~~-~~~~~~~yd~~~~ 330 (362)
+++.+.+. ....+.||-++. ..|.....+.........+.+..++ .++... .++.+..||+++.
T Consensus 170 ~~~l~sgs--~D~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~sp~~~~~~~las~s~D~~v~iWd~~~~ 239 (297)
T 2pm7_B 170 SRKFVTGG--ADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYMASVSQDRTCIIWTQDNE 239 (297)
T ss_dssp CCEEEEEE--TTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESST
T ss_pred cceEEEEc--CCCcEEEEEEcCCCceEEEEEEecCCCCceEEEEECCCCCCceEEEEEECCCcEEEEEeCCC
Confidence 34444444 467899999987 5577777665322223344444443 454443 4778999998764
No 182
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=44.46 E-value=1.4e+02 Score=24.94 Aligned_cols=137 Identities=9% Similarity=0.017 Sum_probs=77.6
Q ss_pred ceEEEEECCCCCcee-cccCCCccccccCCcceE-EECceEEEEeeccCCCccEEEEEEcCCce-eeeecCCCCCCCCCc
Q 045569 182 SHVAVYSLSTNSWRY-CDCFKSNHYYMDGAFDSV-YLDGVCYWLSEFRDNDHKVILSFHLGNEV-FEEIQEPYIPESTPT 258 (362)
Q Consensus 182 ~~~eVyss~~~~W~~-~~~~~~~~~~~~~~~~~v-~~~G~lywl~~~~~~~~~~il~fD~~~e~-~~~i~~P~~~~~~~~ 258 (362)
..+.+++..++.=.. +.... .+. ..++ ..++.+|...... ..+.++|..+.+ -..|+.+ ... . .
T Consensus 44 s~v~~iD~~tg~v~~~i~l~~--~~f----geGi~~~g~~lyv~t~~~----~~v~viD~~t~~v~~~i~~g-~~~-g-~ 110 (266)
T 2iwa_A 44 SSVRQVALQTGKVENIHKMDD--SYF----GEGLTLLNEKLYQVVWLK----NIGFIYDRRTLSNIKNFTHQ-MKD-G-W 110 (266)
T ss_dssp CEEEEEETTTCCEEEEEECCT--TCC----EEEEEEETTEEEEEETTC----SEEEEEETTTTEEEEEEECC-SSS-C-C
T ss_pred CEEEEEECCCCCEEEEEecCC--Ccc----eEEEEEeCCEEEEEEecC----CEEEEEECCCCcEEEEEECC-CCC-e-E
Confidence 469999999875222 21111 111 2233 3456899988653 479999998754 4556665 111 1 3
Q ss_pred EEEEECCeEEEEEEcCCCCeEEEEEeeCCeeEEEEEeCCCCC---cee--eEEEeeCCcEEEEec-CCeEEEEeCCCCcE
Q 045569 259 ILGIYNHSLCLLLSHNIENYYDIWVMKYKCWIKQLSLGPLNG---VRT--PLGFWKKGAFFVHST-NEQLLLYDPNTQEM 332 (362)
Q Consensus 259 ~l~~~~g~L~l~~~~~~~~~~~IW~l~~~~W~~~~~i~~~~~---~~~--~~~~~~~g~il~~~~-~~~~~~yd~~~~~~ 332 (362)
.|..-+++|++.. ... .|++++-..-....+|..... +.. -+.+. +|++|.... .+.+..-|+++++.
T Consensus 111 glt~Dg~~l~vs~---gs~--~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~-dg~lyvn~~~~~~V~vID~~tg~V 184 (266)
T 2iwa_A 111 GLATDGKILYGSD---GTS--ILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYI-NGEVWANIWQTDCIARISAKDGTL 184 (266)
T ss_dssp EEEECSSSEEEEC---SSS--EEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTSSEEEEEETTTCCE
T ss_pred EEEECCCEEEEEC---CCC--eEEEEECCCCcEEEEEEECCCCcccccceeEEEE-CCEEEEecCCCCeEEEEECCCCcE
Confidence 4555455676543 223 677777644444555553211 111 12223 677776653 67899999999876
Q ss_pred E-EeeE
Q 045569 333 R-DLGR 337 (362)
Q Consensus 333 ~-~v~~ 337 (362)
. .+.+
T Consensus 185 ~~~I~~ 190 (266)
T 2iwa_A 185 LGWILL 190 (266)
T ss_dssp EEEEEC
T ss_pred EEEEEC
Confidence 4 4554
No 183
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=44.41 E-value=1.4e+02 Score=25.15 Aligned_cols=199 Identities=11% Similarity=0.046 Sum_probs=93.4
Q ss_pred eEeeeeeeeEEEeecCceEEEEeCCCccccc-CCCCCcCCCCcccceeeeeeeeecCCC-CCeEEEEEEEEeeccccccc
Q 045569 102 ELVGPYNGIFCIFGNNNRITLWNRATKESRV-LPKCTTVFPKYTSIFCKCTGFGLDPMS-TDYKLVLIFTLWNEKLDLLY 179 (362)
Q Consensus 102 ~~~~s~~GLl~~~~~~~~~~V~NP~T~~~~~-LP~~~~~~~~~~~~~~~~~~~g~d~~~-~~ykVv~~~~~~~~~~~~~~ 179 (362)
.+.++.+|-+.+-.....+.++|..+++... ..... ... ...+.++|.. +.+ ++... .
T Consensus 88 ~~s~s~D~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~---~~~------v~~~~~~~~~~~~~-l~s~s---~------- 147 (343)
T 3lrv_A 88 IISRGPCNRLLLLYPGNQITILDSKTNKVLREIEVDS---ANE------IIYMYGHNEVNTEY-FIWAD---N------- 147 (343)
T ss_dssp EEEECSTTEEEEEETTTEEEEEETTTCCEEEEEECCC---SSC------EEEEECCC---CCE-EEEEE---T-------
T ss_pred eEEecCCCeEEEEEccCceEEeecCCcceeEEeecCC---CCC------EEEEEcCCCCCCCE-EEEEe---C-------
Confidence 4455666766666555557777777776322 11111 011 4566677632 233 22221 1
Q ss_pred CcceEEEEECCCCCceecccCCCccccccCCcceEEECceEEEEeeccCCCccEEEEEEcCCceeeeecCCCCCCCCC-c
Q 045569 180 EFSHVAVYSLSTNSWRYCDCFKSNHYYMDGAFDSVYLDGVCYWLSEFRDNDHKVILSFHLGNEVFEEIQEPYIPESTP-T 258 (362)
Q Consensus 180 ~~~~~eVyss~~~~W~~~~~~~~~~~~~~~~~~~v~~~G~lywl~~~~~~~~~~il~fD~~~e~~~~i~~P~~~~~~~-~ 258 (362)
...+.+|+.+++.-............ ..-...-+|.+...... ...|..+|+.+.+-....+.... ... .
T Consensus 148 -dg~i~~wd~~~~~~~~~~~~~~~~~i---~~~~~~pdg~~lasg~~----dg~i~iwd~~~~~~~~~~~~~~h-~~~v~ 218 (343)
T 3lrv_A 148 -RGTIGFQSYEDDSQYIVHSAKSDVEY---SSGVLHKDSLLLALYSP----DGILDVYNLSSPDQASSRFPVDE-EAKIK 218 (343)
T ss_dssp -TCCEEEEESSSSCEEEEECCCSSCCC---CEEEECTTSCEEEEECT----TSCEEEEESSCTTSCCEECCCCT-TSCEE
T ss_pred -CCcEEEEECCCCcEEEEEecCCCCce---EEEEECCCCCEEEEEcC----CCEEEEEECCCCCCCccEEeccC-CCCEE
Confidence 13588999887654322111111111 01111124544433332 34788999987654311222211 111 2
Q ss_pred EEEEE-CCeEEEEEEcCCCCeEEEEEeeCCeeEEEEEeCCCC--Cc---eeeEEEeeCCcEEEEe-c-CCeEEEEeCC--
Q 045569 259 ILGIY-NHSLCLLLSHNIENYYDIWVMKYKCWIKQLSLGPLN--GV---RTPLGFWKKGAFFVHS-T-NEQLLLYDPN-- 328 (362)
Q Consensus 259 ~l~~~-~g~L~l~~~~~~~~~~~IW~l~~~~W~~~~~i~~~~--~~---~~~~~~~~~g~il~~~-~-~~~~~~yd~~-- 328 (362)
.+... +|...+.+. .. .+.||-+.... ....+.... .. ...+++..+|+.++.. . ++.+.+||.+
T Consensus 219 ~l~fs~~g~~l~s~~--~~-~v~iwd~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~s~~d~~i~v~~~~~~ 293 (343)
T 3lrv_A 219 EVKFADNGYWMVVEC--DQ-TVVCFDLRKDV--GTLAYPTYTIPEFKTGTVTYDIDDSGKNMIAYSNESNSLTIYKFDKK 293 (343)
T ss_dssp EEEECTTSSEEEEEE--SS-BEEEEETTSST--TCBSSCCCBC-----CCEEEEECTTSSEEEEEETTTTEEEEEEECTT
T ss_pred EEEEeCCCCEEEEEe--CC-eEEEEEcCCCC--cceeecccccccccccceEEEECCCCCEEEEecCCCCcEEEEEEccc
Confidence 33332 555544444 23 99999987611 011111100 01 0235666677777663 3 6778888874
Q ss_pred CCcEEE
Q 045569 329 TQEMRD 334 (362)
Q Consensus 329 ~~~~~~ 334 (362)
++.|+.
T Consensus 294 ~~~~~~ 299 (343)
T 3lrv_A 294 TKNWTK 299 (343)
T ss_dssp TCSEEE
T ss_pred ccceEe
Confidence 455665
No 184
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=44.00 E-value=1.5e+02 Score=25.10 Aligned_cols=95 Identities=11% Similarity=0.029 Sum_probs=54.0
Q ss_pred cEEEEEEcCCceeeeec-CCCCCCCCCcEEEE-ECCeEEEEEEcCCCCeEEEEEeeCCeeEEEEEeCC-CCCceeeEEEe
Q 045569 232 KVILSFHLGNEVFEEIQ-EPYIPESTPTILGI-YNHSLCLLLSHNIENYYDIWVMKYKCWIKQLSLGP-LNGVRTPLGFW 308 (362)
Q Consensus 232 ~~il~fD~~~e~~~~i~-~P~~~~~~~~~l~~-~~g~L~l~~~~~~~~~~~IW~l~~~~W~~~~~i~~-~~~~~~~~~~~ 308 (362)
..|..+|+.+.+...+. .+.... ...+.. -+|.+.+++. ....+.||-++...-. ...+.. ...-...+.+.
T Consensus 149 g~i~~wd~~~~~~~~~~~~~~~~~--i~~~~~~pdg~~lasg~--~dg~i~iwd~~~~~~~-~~~~~~~h~~~v~~l~fs 223 (343)
T 3lrv_A 149 GTIGFQSYEDDSQYIVHSAKSDVE--YSSGVLHKDSLLLALYS--PDGILDVYNLSSPDQA-SSRFPVDEEAKIKEVKFA 223 (343)
T ss_dssp CCEEEEESSSSCEEEEECCCSSCC--CCEEEECTTSCEEEEEC--TTSCEEEEESSCTTSC-CEECCCCTTSCEEEEEEC
T ss_pred CcEEEEECCCCcEEEEEecCCCCc--eEEEEECCCCCEEEEEc--CCCEEEEEECCCCCCC-ccEEeccCCCCEEEEEEe
Confidence 36888998877664332 221111 123333 2566655544 4679999999873211 022222 11222345555
Q ss_pred eCCcEEEEecCCeEEEEeCCCCc
Q 045569 309 KKGAFFVHSTNEQLLLYDPNTQE 331 (362)
Q Consensus 309 ~~g~il~~~~~~~~~~yd~~~~~ 331 (362)
.+|..++...++.+..||+++.+
T Consensus 224 ~~g~~l~s~~~~~v~iwd~~~~~ 246 (343)
T 3lrv_A 224 DNGYWMVVECDQTVVCFDLRKDV 246 (343)
T ss_dssp TTSSEEEEEESSBEEEEETTSST
T ss_pred CCCCEEEEEeCCeEEEEEcCCCC
Confidence 67877777666799999998764
No 185
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=43.49 E-value=1.5e+02 Score=25.06 Aligned_cols=196 Identities=8% Similarity=-0.060 Sum_probs=95.4
Q ss_pred eeeEEEe-ecCceEEEEeCCCcccccCCCCCcCCCCcccceeeeeeeeecCCCCCeEEEEEEEEeecccccccCcceEEE
Q 045569 108 NGIFCIF-GNNNRITLWNRATKESRVLPKCTTVFPKYTSIFCKCTGFGLDPMSTDYKLVLIFTLWNEKLDLLYEFSHVAV 186 (362)
Q Consensus 108 ~GLl~~~-~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~eV 186 (362)
+|.+++. .....++++||.+++...++.+. . ..++.+++.. . ++... . ..+.+
T Consensus 60 ~~~l~~~d~~~~~i~~~d~~~~~~~~~~~~~-----~------v~~i~~~~dg-~--l~v~~----~--------~gl~~ 113 (326)
T 2ghs_A 60 SGTAWWFNILERELHELHLASGRKTVHALPF-----M------GSALAKISDS-K--QLIAS----D--------DGLFL 113 (326)
T ss_dssp TTEEEEEEGGGTEEEEEETTTTEEEEEECSS-----C------EEEEEEEETT-E--EEEEE----T--------TEEEE
T ss_pred CCEEEEEECCCCEEEEEECCCCcEEEEECCC-----c------ceEEEEeCCC-e--EEEEE----C--------CCEEE
Confidence 3555554 34456999999998765443211 1 3455666543 2 22221 1 24778
Q ss_pred EECCCCCceecccCCCccccccCCcceEE--ECceEEEEeecc--CCCccEEEEEEcCCceeeeecCCCCCCCCCcEEEE
Q 045569 187 YSLSTNSWRYCDCFKSNHYYMDGAFDSVY--LDGVCYWLSEFR--DNDHKVILSFHLGNEVFEEIQEPYIPESTPTILGI 262 (362)
Q Consensus 187 yss~~~~W~~~~~~~~~~~~~~~~~~~v~--~~G~lywl~~~~--~~~~~~il~fD~~~e~~~~i~~P~~~~~~~~~l~~ 262 (362)
|+..++..+.+.......+.. ....+. -+|.+|.-.... ......|..+| +.++..+.- .... ...++.
T Consensus 114 ~d~~~g~~~~~~~~~~~~~~~--~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~~~~~~~--~~~~-~~~i~~ 186 (326)
T 2ghs_A 114 RDTATGVLTLHAELESDLPGN--RSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KGKVTKLFA--DISI-PNSICF 186 (326)
T ss_dssp EETTTCCEEEEECSSTTCTTE--EEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TTEEEEEEE--EESS-EEEEEE
T ss_pred EECCCCcEEEEeeCCCCCCCC--CCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--CCcEEEeeC--CCcc-cCCeEE
Confidence 888888776553321111100 012222 357765443221 01134788888 455554321 0000 012332
Q ss_pred E-CCe-EEEEEEcCCCCeEEEEEee--CC-eeE--E-EEEeCCCCCceeeEEEeeCCcEEEEec-CCeEEEEeCCCCcEE
Q 045569 263 Y-NHS-LCLLLSHNIENYYDIWVMK--YK-CWI--K-QLSLGPLNGVRTPLGFWKKGAFFVHST-NEQLLLYDPNTQEMR 333 (362)
Q Consensus 263 ~-~g~-L~l~~~~~~~~~~~IW~l~--~~-~W~--~-~~~i~~~~~~~~~~~~~~~g~il~~~~-~~~~~~yd~~~~~~~ 333 (362)
. +|+ |+++.. ....+.+|.++ .+ ... + ...+........-+.+..+|.+++... .+.+..||++.+..+
T Consensus 187 s~dg~~lyv~~~--~~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~lwva~~~~~~v~~~d~~g~~~~ 264 (326)
T 2ghs_A 187 SPDGTTGYFVDT--KVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWGEGAVDRYDTDGNHIA 264 (326)
T ss_dssp CTTSCEEEEEET--TTCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEETTTEEEEECTTCCEEE
T ss_pred cCCCCEEEEEEC--CCCEEEEEEcccccCCcccCceEEEECCCCCCCCCeeEECCCCCEEEEEeCCCEEEEECCCCCEEE
Confidence 2 554 555443 34566666654 23 221 1 112221112223344445688888753 578999999766666
Q ss_pred EeeEe
Q 045569 334 DLGRK 338 (362)
Q Consensus 334 ~v~~~ 338 (362)
.+...
T Consensus 265 ~i~~~ 269 (326)
T 2ghs_A 265 RYEVP 269 (326)
T ss_dssp EEECS
T ss_pred EEECC
Confidence 66543
No 186
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=41.32 E-value=1.9e+02 Score=25.57 Aligned_cols=107 Identities=9% Similarity=0.014 Sum_probs=55.7
Q ss_pred CceEEEEeeccCCCccEEEEEEcCCceeeeecCCCCCCCCCcEEEE--ECCeEEEEEEcCCCCeEEEEEeeC-CeeEEEE
Q 045569 217 DGVCYWLSEFRDNDHKVILSFHLGNEVFEEIQEPYIPESTPTILGI--YNHSLCLLLSHNIENYYDIWVMKY-KCWIKQL 293 (362)
Q Consensus 217 ~G~lywl~~~~~~~~~~il~fD~~~e~~~~i~~P~~~~~~~~~l~~--~~g~L~l~~~~~~~~~~~IW~l~~-~~W~~~~ 293 (362)
+|.|||..... ..|..+|++...-..+-. .... ....++. .+|.|+..... .... |++.+- ++-.+..
T Consensus 170 ~~~lY~~d~~~----~~I~~~~~~g~~~~~l~~-~~~~-~P~~iavdp~~g~ly~td~~-~~~~--I~~~~~dG~~~~~~ 240 (400)
T 3p5b_L 170 HSNIYWTDSVL----GTVSVADTKGVKRKTLFR-ENGS-KPRAIVVDPVHGFMYWTDWG-TPAK--IKKGGLNGVDIYSL 240 (400)
T ss_dssp TTEEEEEETTT----TEEEEECTTTCSEEEEEE-CSSC-CEEEEEEETTTTEEEEEECS-SSCC--EEEEETTSCSCEEE
T ss_pred CCceEEEECCC----CeEEEEeCCCCceEEEEe-CCCC-CcceEEEecccCeEEEEeCC-CCCE--EEEEeCCCCccEEE
Confidence 68999998653 479999998765443311 1111 1134444 36778776542 2233 444443 2111111
Q ss_pred EeCCCCCceeeE--EEe-eCCcEEEEec-CCeEEEEeCCCCcEEEe
Q 045569 294 SLGPLNGVRTPL--GFW-KKGAFFVHST-NEQLLLYDPNTQEMRDL 335 (362)
Q Consensus 294 ~i~~~~~~~~~~--~~~-~~g~il~~~~-~~~~~~yd~~~~~~~~v 335 (362)
+. ..+..|. ++. .++.||+... ...+..+|++.+..+.+
T Consensus 241 -~~--~~l~~P~glavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~ 283 (400)
T 3p5b_L 241 -VT--ENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTI 283 (400)
T ss_dssp -EC--SSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCCEEE
T ss_pred -EE--CCCCceEEEEEEeCCCEEEEEECCCCEEEEEeCCCCccEEE
Confidence 11 1223443 333 2456666654 45788888876655544
No 187
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=41.19 E-value=1.5e+02 Score=24.50 Aligned_cols=67 Identities=12% Similarity=0.124 Sum_probs=40.1
Q ss_pred CCeEEEEEEcCCCCeEEEEEeeCCeeEEEEEeCCCCCceeeEEEeeCCcEEEEe-cCCeEEEEeCCCCcEEE
Q 045569 264 NHSLCLLLSHNIENYYDIWVMKYKCWIKQLSLGPLNGVRTPLGFWKKGAFFVHS-TNEQLLLYDPNTQEMRD 334 (362)
Q Consensus 264 ~g~L~l~~~~~~~~~~~IW~l~~~~W~~~~~i~~~~~~~~~~~~~~~g~il~~~-~~~~~~~yd~~~~~~~~ 334 (362)
++.+.+.+. ....+.||-++... ....+.........+.+..++.+++.. .++.+..||.++.+...
T Consensus 197 ~~~~l~s~s--~D~~i~iWd~~~~~--~~~~~~~h~~~v~~~~~~p~~~~l~s~s~Dg~i~iWd~~~~~~~~ 264 (304)
T 2ynn_A 197 DKPYMITAS--DDLTIKIWDYQTKS--CVATLEGHMSNVSFAVFHPTLPIIISGSEDGTLKIWNSSTYKVEK 264 (304)
T ss_dssp TCCEEEEEE--TTSEEEEEETTTTE--EEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEE
T ss_pred CCCEEEEEc--CCCeEEEEeCCCCc--cceeeCCCCCCEEEEEECCCCCEEEEEcCCCeEEEEECCCCceee
Confidence 344444444 46799999887632 333343222222334455667766654 47789999999877654
No 188
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=39.72 E-value=1.8e+02 Score=24.86 Aligned_cols=134 Identities=6% Similarity=-0.041 Sum_probs=71.3
Q ss_pred eEEEEECCCCCceecccCCCccccccCCcceEEE---CceEEEEeeccCCCccEEEEEEcCCceeeeecCCCCCCCCCcE
Q 045569 183 HVAVYSLSTNSWRYCDCFKSNHYYMDGAFDSVYL---DGVCYWLSEFRDNDHKVILSFHLGNEVFEEIQEPYIPESTPTI 259 (362)
Q Consensus 183 ~~eVyss~~~~W~~~~~~~~~~~~~~~~~~~v~~---~G~lywl~~~~~~~~~~il~fD~~~e~~~~i~~P~~~~~~~~~ 259 (362)
.+.||+..++.....-.....-. .-.++.+ +|........ ...|..+|+.++....+............
T Consensus 97 ~i~iwd~~~~~~~~~~~~~~h~~----~v~~~~~~~~~~~~l~s~~~----d~~i~iwd~~~~~~~~~~~~~~~~~~v~~ 168 (383)
T 3ei3_B 97 DIILWDYDVQNKTSFIQGMGPGD----AITGMKFNQFNTNQLFVSSI----RGATTLRDFSGSVIQVFAKTDSWDYWYCC 168 (383)
T ss_dssp CEEEEETTSTTCEEEECCCSTTC----BEEEEEEETTEEEEEEEEET----TTEEEEEETTSCEEEEEECCCCSSCCEEE
T ss_pred eEEEEeCCCcccceeeecCCcCC----ceeEEEeCCCCCCEEEEEeC----CCEEEEEECCCCceEEEeccCCCCCCeEE
Confidence 58999998876654322111010 0122323 2333333322 34789999998777766544332221123
Q ss_pred EE-EECCeEEEEEEcCCCCeEEEEEeeCCeeEEEEEeCCCCCceeeEEEeeCCc-EEEEe-cCCeEEEEeCCC
Q 045569 260 LG-IYNHSLCLLLSHNIENYYDIWVMKYKCWIKQLSLGPLNGVRTPLGFWKKGA-FFVHS-TNEQLLLYDPNT 329 (362)
Q Consensus 260 l~-~~~g~L~l~~~~~~~~~~~IW~l~~~~W~~~~~i~~~~~~~~~~~~~~~g~-il~~~-~~~~~~~yd~~~ 329 (362)
+. ..+|...+++. ....+.+|-++.. ....+.........+.+..++. +++.. .++.+..||+++
T Consensus 169 ~~~~~~~~~l~~~~--~d~~i~i~d~~~~---~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~ 236 (383)
T 3ei3_B 169 VDVSVSRQMLATGD--STGRLLLLGLDGH---EIFKEKLHKAKVTHAEFNPRCDWLMATSSVDATVKLWDLRN 236 (383)
T ss_dssp EEEETTTTEEEEEE--TTSEEEEEETTSC---EEEEEECSSSCEEEEEECSSCTTEEEEEETTSEEEEEEGGG
T ss_pred EEECCCCCEEEEEC--CCCCEEEEECCCC---EEEEeccCCCcEEEEEECCCCCCEEEEEeCCCEEEEEeCCC
Confidence 33 23566555554 4679999998542 2223322222223445556666 55544 477899999987
No 189
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=39.29 E-value=2.6e+02 Score=26.54 Aligned_cols=189 Identities=11% Similarity=0.054 Sum_probs=91.8
Q ss_pred ceEEEEeCCCcccccCCCCCcCCCCcccceeeeeeeeecCCCCCeEEEEEEEEeecccccccCcceEEEEECCCC-Ccee
Q 045569 118 NRITLWNRATKESRVLPKCTTVFPKYTSIFCKCTGFGLDPMSTDYKLVLIFTLWNEKLDLLYEFSHVAVYSLSTN-SWRY 196 (362)
Q Consensus 118 ~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~eVyss~~~-~W~~ 196 (362)
..++++|..+++...+..... ... ....+.+.|..+ +-++... .. ......+.+++..++ ..+.
T Consensus 235 ~~l~~~d~~~~~~~~~~~~~~-~~~------~~~~~~~spdg~-~l~~~~~---~~----~~~~~~v~~~d~~~g~~~~~ 299 (706)
T 2z3z_A 235 VTVGIYHLATGKTVYLQTGEP-KEK------FLTNLSWSPDEN-ILYVAEV---NR----AQNECKVNAYDAETGRFVRT 299 (706)
T ss_dssp EEEEEEETTTTEEEECCCCSC-TTC------EEEEEEECTTSS-EEEEEEE---CT----TSCEEEEEEEETTTCCEEEE
T ss_pred eEEEEEECCCCceEeeccCCC-Cce------eEeeEEEECCCC-EEEEEEe---CC----CCCeeEEEEEECCCCceeeE
Confidence 468999999988766543211 111 134556666433 2222211 11 111246788888887 6665
Q ss_pred cccCCC-ccccccCCcceEEE--CceEEEEeeccCCCccEEEEEEcCCceeeeecCCCCCCCCCcE-EEE-ECCe-EEEE
Q 045569 197 CDCFKS-NHYYMDGAFDSVYL--DGVCYWLSEFRDNDHKVILSFHLGNEVFEEIQEPYIPESTPTI-LGI-YNHS-LCLL 270 (362)
Q Consensus 197 ~~~~~~-~~~~~~~~~~~v~~--~G~lywl~~~~~~~~~~il~fD~~~e~~~~i~~P~~~~~~~~~-l~~-~~g~-L~l~ 270 (362)
+..... ...... ......- +|.+.+....+ ....|..+|...+....+..... . ... +.. -+|+ |++.
T Consensus 300 ~~~~~~~~~~~~~-~~~~~sp~~dg~~l~~~~~~--g~~~l~~~~~~~~~~~~l~~~~~--~-v~~~~~~spdg~~l~~~ 373 (706)
T 2z3z_A 300 LFVETDKHYVEPL-HPLTFLPGSNNQFIWQSRRD--GWNHLYLYDTTGRLIRQVTKGEW--E-VTNFAGFDPKGTRLYFE 373 (706)
T ss_dssp EEEEECSSCCCCC-SCCEECTTCSSEEEEEECTT--SSCEEEEEETTSCEEEECCCSSS--C-EEEEEEECTTSSEEEEE
T ss_pred EEEccCCCeECcc-CCceeecCCCCEEEEEEccC--CccEEEEEECCCCEEEecCCCCe--E-EEeeeEEcCCCCEEEEE
Confidence 432111 010000 0111222 78866665443 24578888877776665532111 0 012 222 2454 5444
Q ss_pred EEcCCCCeEEEEEeeC--CeeEEEEEeCCCCCceeeEEEeeCCcEEEEe-cC----CeEEEEeCCCCc
Q 045569 271 LSHNIENYYDIWVMKY--KCWIKQLSLGPLNGVRTPLGFWKKGAFFVHS-TN----EQLLLYDPNTQE 331 (362)
Q Consensus 271 ~~~~~~~~~~IW~l~~--~~W~~~~~i~~~~~~~~~~~~~~~g~il~~~-~~----~~~~~yd~~~~~ 331 (362)
..........||..+- .. ...+.....+ ..+.+..+|+.++.. .+ ..+..+|.++++
T Consensus 374 ~~~~~~~~~~l~~~d~~~~~---~~~l~~~~~~-~~~~~spdg~~l~~~~~~~~~p~~i~l~d~~~~~ 437 (706)
T 2z3z_A 374 STEASPLERHFYCIDIKGGK---TKDLTPESGM-HRTQLSPDGSAIIDIFQSPTVPRKVTVTNIGKGS 437 (706)
T ss_dssp ESSSCTTCBEEEEEETTCCC---CEESCCSSSE-EEEEECTTSSEEEEEEECSSCSCEEEEEESSSCE
T ss_pred ecCCCCceEEEEEEEcCCCC---ceeccCCCce-EEEEECCCCCEEEEEecCCCCCcEEEEEECCCCe
Confidence 4432223567787764 32 2233322222 234455667654432 22 459999998876
No 190
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=38.81 E-value=1.8e+02 Score=24.70 Aligned_cols=133 Identities=12% Similarity=0.021 Sum_probs=68.5
Q ss_pred eEEEEECCCCCceecccCCCccccccCCcceEEE---CceEEEEeeccCCCccEEEEEEcCCceeeeecCCCCCCCCCcE
Q 045569 183 HVAVYSLSTNSWRYCDCFKSNHYYMDGAFDSVYL---DGVCYWLSEFRDNDHKVILSFHLGNEVFEEIQEPYIPESTPTI 259 (362)
Q Consensus 183 ~~eVyss~~~~W~~~~~~~~~~~~~~~~~~~v~~---~G~lywl~~~~~~~~~~il~fD~~~e~~~~i~~P~~~~~~~~~ 259 (362)
.+++++..+..=+.+... ... ...++.+ +|.+||..... ...|.++|+....-..+- ..... ...-
T Consensus 102 ~I~~~~~dG~~~~~l~~~--~~~----~P~giavdp~~g~ly~td~~~---~~~I~r~~~dG~~~~~~~-~~~l~-~Png 170 (318)
T 3sov_A 102 RIEVSNLDGSLRKVLFWQ--ELD----QPRAIALDPSSGFMYWTDWGE---VPKIERAGMDGSSRFIII-NSEIY-WPNG 170 (318)
T ss_dssp EEEEEETTSCSCEEEECS--SCS----SEEEEEEEGGGTEEEEEECSS---SCEEEEEETTSCSCEEEE-CSSCS-CEEE
T ss_pred EEEEEECCCCcEEEEEeC--CCC----CccEEEEeCCCCEEEEEecCC---CCEEEEEEcCCCCeEEEE-ECCCC-CccE
Confidence 578888765432222111 111 1344444 58999987542 347999998754333221 11111 1123
Q ss_pred EEEE--CCeEEEEEEcCCCCeEEEEEeeCCeeEEEEEeCCCCCceeeEEEe-eCCcEEEEec-CCeEEEEeCCCCcE
Q 045569 260 LGIY--NHSLCLLLSHNIENYYDIWVMKYKCWIKQLSLGPLNGVRTPLGFW-KKGAFFVHST-NEQLLLYDPNTQEM 332 (362)
Q Consensus 260 l~~~--~g~L~l~~~~~~~~~~~IW~l~~~~W~~~~~i~~~~~~~~~~~~~-~~g~il~~~~-~~~~~~yd~~~~~~ 332 (362)
|+.. +|+|+++.. ....|...-++... .+.. +. .....|.++. .++.+|+... .+++..+|+.+++.
T Consensus 171 lavd~~~~~lY~aD~--~~~~I~~~d~dG~~-~~~~-~~--~~~~~P~glav~~~~lywtd~~~~~V~~~~~~~G~~ 241 (318)
T 3sov_A 171 LTLDYEEQKLYWADA--KLNFIHKSNLDGTN-RQAV-VK--GSLPHPFALTLFEDILYWTDWSTHSILACNKYTGEG 241 (318)
T ss_dssp EEEETTTTEEEEEET--TTTEEEEEETTSCS-CEEE-EC--SCCSCEEEEEEETTEEEEEETTTTEEEEEETTTCCS
T ss_pred EEEeccCCEEEEEEC--CCCEEEEEcCCCCc-eEEE-ec--CCCCCceEEEEeCCEEEEEecCCCeEEEEECCCCCc
Confidence 4443 678888765 34444444444311 1111 11 1234565544 2456666643 57899999976654
No 191
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=38.61 E-value=2e+02 Score=25.14 Aligned_cols=64 Identities=14% Similarity=0.192 Sum_probs=38.2
Q ss_pred CeEEEEEEcCCCCeEEEEEeeCCeeEEEEEeCCCCCceeeEEEeeCCcEEEEe-cCCeEEEEeCCCCcE
Q 045569 265 HSLCLLLSHNIENYYDIWVMKYKCWIKQLSLGPLNGVRTPLGFWKKGAFFVHS-TNEQLLLYDPNTQEM 332 (362)
Q Consensus 265 g~L~l~~~~~~~~~~~IW~l~~~~W~~~~~i~~~~~~~~~~~~~~~g~il~~~-~~~~~~~yd~~~~~~ 332 (362)
|.+.+.+. ....+.||-++... ....+.........+.+..+|..++.. .++.+.+||.++++.
T Consensus 308 g~~l~sgs--~D~~i~iwd~~~~~--~~~~~~~h~~~v~~v~~~~~g~~l~s~s~D~~i~vwd~~~~~~ 372 (410)
T 1vyh_C 308 GPFLLSGS--RDKTIKMWDVSTGM--CLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRC 372 (410)
T ss_dssp CCEEEEEE--TTSEEEEEETTTTE--EEEEEECCSSCEEEEEECSSSSCEEEEETTTEEEEECCTTSCC
T ss_pred CCEEEEEe--CCCeEEEEECCCCc--eEEEEECCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCce
Confidence 55555554 46789999887632 233333222222345555667666554 477899999987653
No 192
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=38.07 E-value=1.7e+02 Score=24.14 Aligned_cols=139 Identities=13% Similarity=0.025 Sum_probs=71.2
Q ss_pred ceEEEEECCCC--CceecccCCCccccccCCcceEEECceEEEEeeccCCCccEEEEEEcCCceeeeecCCCCCCCCCcE
Q 045569 182 SHVAVYSLSTN--SWRYCDCFKSNHYYMDGAFDSVYLDGVCYWLSEFRDNDHKVILSFHLGNEVFEEIQEPYIPESTPTI 259 (362)
Q Consensus 182 ~~~eVyss~~~--~W~~~~~~~~~~~~~~~~~~~v~~~G~lywl~~~~~~~~~~il~fD~~~e~~~~i~~P~~~~~~~~~ 259 (362)
..+.+++.+++ .|+.-..... ... ...+.-+|.++. ... ..|.+||.+.+.-..+..|..... ..
T Consensus 15 ~~v~~~d~~tG~~~w~~~~~~~~-~~~----~~~~~pdG~ilv-s~~-----~~V~~~d~~G~~~W~~~~~~~~~~--~~ 81 (276)
T 3no2_A 15 NKIAIINKDTKEIVWEYPLEKGW-ECN----SVAATKAGEILF-SYS-----KGAKMITRDGRELWNIAAPAGCEM--QT 81 (276)
T ss_dssp SEEEEEETTTTEEEEEEECCTTC-CCC----EEEECTTSCEEE-ECB-----SEEEEECTTSCEEEEEECCTTCEE--EE
T ss_pred CEEEEEECCCCeEEEEeCCCccC-CCc----CeEECCCCCEEE-eCC-----CCEEEECCCCCEEEEEcCCCCccc--cc
Confidence 35778888776 5776432100 010 223344787766 332 369999995544444555532111 11
Q ss_pred E-EEECCeEEEEEEcCCCCeEEEEEeeC-CeeEEEEEeCCC--CC--ceeeEEEeeCCcEEEEec-CCeEEEEeCCCCcE
Q 045569 260 L-GIYNHSLCLLLSHNIENYYDIWVMKY-KCWIKQLSLGPL--NG--VRTPLGFWKKGAFFVHST-NEQLLLYDPNTQEM 332 (362)
Q Consensus 260 l-~~~~g~L~l~~~~~~~~~~~IW~l~~-~~W~~~~~i~~~--~~--~~~~~~~~~~g~il~~~~-~~~~~~yd~~~~~~ 332 (362)
. ...+|.+.++.... .-.|+.++. ++......+... .. ....+....+|.+++... ++.+..||++.+.+
T Consensus 82 ~~~~~dG~~lv~~~~~---~~~v~~vd~~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~~~~~v~~~d~~G~~~ 158 (276)
T 3no2_A 82 ARILPDGNALVAWCGH---PSTILEVNMKGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFATSEVREIAPNGQLL 158 (276)
T ss_dssp EEECTTSCEEEEEEST---TEEEEEECTTSCEEEEEEECCSCSSGGGSCSCCEECTTSCEEEEETTTTEEEEECTTSCEE
T ss_pred cEECCCCCEEEEecCC---CCEEEEEeCCCCEEEEEeccCCCCcccccccCceECCCCCEEEEecCCCEEEEECCCCCEE
Confidence 2 23467766655421 235566654 332222333211 00 112234455788877654 67899999985544
Q ss_pred EEee
Q 045569 333 RDLG 336 (362)
Q Consensus 333 ~~v~ 336 (362)
.++.
T Consensus 159 w~~~ 162 (276)
T 3no2_A 159 NSVK 162 (276)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 4444
No 193
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=38.06 E-value=2.7e+02 Score=26.44 Aligned_cols=66 Identities=15% Similarity=0.181 Sum_probs=39.3
Q ss_pred eEEEEEEcCCCCeEEEEEeeC--CeeEE-EEEeCCCCCceeeEEEeeCCcEEEEec-CCeEEEEeCCCCcEE
Q 045569 266 SLCLLLSHNIENYYDIWVMKY--KCWIK-QLSLGPLNGVRTPLGFWKKGAFFVHST-NEQLLLYDPNTQEMR 333 (362)
Q Consensus 266 ~L~l~~~~~~~~~~~IW~l~~--~~W~~-~~~i~~~~~~~~~~~~~~~g~il~~~~-~~~~~~yd~~~~~~~ 333 (362)
.+.+.+. ....+.||.+.. ..+.. ..++.........+++..+|.+++... ++.+.+||+.+++..
T Consensus 396 ~~l~s~s--~D~~i~~W~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~sgs~Dg~v~vwd~~~~~~~ 465 (694)
T 3dm0_A 396 DIIVSAS--RDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWDGELRLWDLAAGVST 465 (694)
T ss_dssp SEEEEEE--TTSEEEEEECCCSTTCSCEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEE
T ss_pred CEEEEEe--CCCcEEEEEccCCCcccccccceecCCCCcEEEEEECCCCCEEEEEeCCCcEEEEECCCCcce
Confidence 3444444 467999999876 22222 223322222234455666777776554 788999999887654
No 194
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=36.70 E-value=1.8e+02 Score=23.93 Aligned_cols=32 Identities=9% Similarity=0.297 Sum_probs=20.9
Q ss_pred EEEeeCCcEEEEe-cCCeEEEEeCCCC-cEEEee
Q 045569 305 LGFWKKGAFFVHS-TNEQLLLYDPNTQ-EMRDLG 336 (362)
Q Consensus 305 ~~~~~~g~il~~~-~~~~~~~yd~~~~-~~~~v~ 336 (362)
+.+..++.+++.. .++.+..||.+++ .++.+.
T Consensus 312 ~~~s~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~ 345 (351)
T 3f3f_A 312 VSWNLTGTILSSAGDDGKVRLWKATYSNEFKCMS 345 (351)
T ss_dssp EEECSSSCCEEEEETTSCEEEEEECTTSCEEEEE
T ss_pred EEEcCCCCEEEEecCCCcEEEEecCcCcchhhee
Confidence 4444566655544 4778999999875 455554
No 195
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=36.42 E-value=1.8e+02 Score=24.01 Aligned_cols=57 Identities=12% Similarity=0.168 Sum_probs=34.6
Q ss_pred CCCeEEEEEeeCCeeEEEEEeCCCCCceeeEEEeeCCcEEEEe-cCCeEEEEeCCCCcEE
Q 045569 275 IENYYDIWVMKYKCWIKQLSLGPLNGVRTPLGFWKKGAFFVHS-TNEQLLLYDPNTQEMR 333 (362)
Q Consensus 275 ~~~~~~IW~l~~~~W~~~~~i~~~~~~~~~~~~~~~g~il~~~-~~~~~~~yd~~~~~~~ 333 (362)
....+.+|-++... ....+.........+.+..++.+++.. .++.+..||+++.+..
T Consensus 193 ~d~~i~i~d~~~~~--~~~~~~~h~~~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~~~~~ 250 (340)
T 4aow_A 193 WDKLVKVWNLANCK--LKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHL 250 (340)
T ss_dssp TTSCEEEEETTTTE--EEEEECCCSSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEE
T ss_pred CCCEEEEEECCCCc--eeeEecCCCCcEEEEEECCCCCEEEEEeCCCeEEEEEeccCcee
Confidence 45789999887632 233333222222344555677776654 4788999999886543
No 196
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=35.98 E-value=2.1e+02 Score=24.65 Aligned_cols=188 Identities=11% Similarity=0.070 Sum_probs=93.9
Q ss_pred eee-eEEEeecCceEEEEeCCCcccccCCCCCcCCCCcccceeeeeeeeecCCCCCeEEEEEEEEeecccccccCcceEE
Q 045569 107 YNG-IFCIFGNNNRITLWNRATKESRVLPKCTTVFPKYTSIFCKCTGFGLDPMSTDYKLVLIFTLWNEKLDLLYEFSHVA 185 (362)
Q Consensus 107 ~~G-Ll~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~e 185 (362)
.+| +|...+.++.+.|||..+++....-.... .. ...+.+.|..+ .++... . ...+.
T Consensus 107 ~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~---~~------v~~~~~~~~~~--~l~s~s----~-------d~~i~ 164 (420)
T 3vl1_A 107 LQMRRFILGTTEGDIKVLDSNFNLQREIDQAHV---SE------ITKLKFFPSGE--ALISSS----Q-------DMQLK 164 (420)
T ss_dssp SSSCEEEEEETTSCEEEECTTSCEEEEETTSSS---SC------EEEEEECTTSS--EEEEEE----T-------TSEEE
T ss_pred cCCCEEEEEECCCCEEEEeCCCcceeeeccccc---Cc------cEEEEECCCCC--EEEEEe----C-------CCeEE
Confidence 344 44444666679999998887665432211 11 56677777533 222221 1 13588
Q ss_pred EEECCCCCc-eecccCCCccccccCCcceEEE--CceEEEEeeccCCCccEEEEEEcCCcee-eeecCCCCCCCCCcEEE
Q 045569 186 VYSLSTNSW-RYCDCFKSNHYYMDGAFDSVYL--DGVCYWLSEFRDNDHKVILSFHLGNEVF-EEIQEPYIPESTPTILG 261 (362)
Q Consensus 186 Vyss~~~~W-~~~~~~~~~~~~~~~~~~~v~~--~G~lywl~~~~~~~~~~il~fD~~~e~~-~~i~~P~~~~~~~~~l~ 261 (362)
+|+..++.= +...... .. -.++.+ +|........ ...|..+|+.+.+. ..+..+.........+.
T Consensus 165 iwd~~~~~~~~~~~~h~--~~-----v~~~~~~~~~~~l~s~~~----d~~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~ 233 (420)
T 3vl1_A 165 IWSVKDGSNPRTLIGHR--AT-----VTDIAIIDRGRNVLSASL----DGTIRLWECGTGTTIHTFNRKENPHDGVNSIA 233 (420)
T ss_dssp EEETTTCCCCEEEECCS--SC-----EEEEEEETTTTEEEEEET----TSCEEEEETTTTEEEEEECBTTBTTCCEEEEE
T ss_pred EEeCCCCcCceEEcCCC--Cc-----EEEEEEcCCCCEEEEEcC----CCcEEEeECCCCceeEEeecCCCCCCCccEEE
Confidence 999876531 1111110 00 111111 3443333222 23688888876554 33333221111101111
Q ss_pred ----------------------EECCeEEEEEEcCCCCeEEEEEeeCCeeEEEEEeCCC-CCceeeEEEeeCCc-EEEEe
Q 045569 262 ----------------------IYNHSLCLLLSHNIENYYDIWVMKYKCWIKQLSLGPL-NGVRTPLGFWKKGA-FFVHS 317 (362)
Q Consensus 262 ----------------------~~~g~L~l~~~~~~~~~~~IW~l~~~~W~~~~~i~~~-~~~~~~~~~~~~g~-il~~~ 317 (362)
.-+|++.+++. ....+.||-+.... ....+... ......+.+..++. +++..
T Consensus 234 ~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~--~dg~i~i~d~~~~~--~~~~~~~~~~~~v~~~~~~~~~~~~l~~g 309 (420)
T 3vl1_A 234 LFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGH--VSGVITVHNVFSKE--QTIQLPSKFTCSCNSLTVDGNNANYIYAG 309 (420)
T ss_dssp EEECCCSSCGGGCCCCCCTTCSSCTTEEEEEEE--TTSCEEEEETTTCC--EEEEECCTTSSCEEEEEECSSCTTEEEEE
T ss_pred EecCCcceeeecccCcccceEEcCCCCEEEEEc--CCCeEEEEECCCCc--eeEEcccccCCCceeEEEeCCCCCEEEEE
Confidence 12566555555 45689999987632 23333321 12233455556665 55544
Q ss_pred -cCCeEEEEeCCCCc
Q 045569 318 -TNEQLLLYDPNTQE 331 (362)
Q Consensus 318 -~~~~~~~yd~~~~~ 331 (362)
.++.+..||+++++
T Consensus 310 ~~dg~i~vwd~~~~~ 324 (420)
T 3vl1_A 310 YENGMLAQWDLRSPE 324 (420)
T ss_dssp ETTSEEEEEETTCTT
T ss_pred eCCCeEEEEEcCCCc
Confidence 47889999998864
No 197
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=35.96 E-value=1.8e+02 Score=23.89 Aligned_cols=185 Identities=11% Similarity=0.134 Sum_probs=88.0
Q ss_pred eEEEeecCceEEEEeCCCcccccCCCCCcCCCCcccceeeeeeeeecCCCCCeEEEEEEEEeecccccccCcceEEEEEC
Q 045569 110 IFCIFGNNNRITLWNRATKESRVLPKCTTVFPKYTSIFCKCTGFGLDPMSTDYKLVLIFTLWNEKLDLLYEFSHVAVYSL 189 (362)
Q Consensus 110 Ll~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~eVyss 189 (362)
+|+..+.+..+.|||..+++....-.. +.. ....+.++|.. .+ ++... . ...+.+++.
T Consensus 79 ~l~s~~~d~~i~vwd~~~~~~~~~~~~----~~~-----~v~~~~~~~~~-~~-l~s~~----~-------d~~i~iwd~ 136 (312)
T 4ery_A 79 LLVSASDDKTLKIWDVSSGKCLKTLKG----HSN-----YVFCCNFNPQS-NL-IVSGS----F-------DESVRIWDV 136 (312)
T ss_dssp EEEEEETTSEEEEEETTTCCEEEEEEC----CSS-----CEEEEEECSSS-SE-EEEEE----T-------TSCEEEEET
T ss_pred EEEEECCCCEEEEEECCCCcEEEEEcC----CCC-----CEEEEEEcCCC-CE-EEEEe----C-------CCcEEEEEC
Confidence 333336666799999888764321110 111 14455666643 22 22221 1 135888888
Q ss_pred CCCCce-ecccCCCccccccCCcceEEE--CceEEEEeeccCCCccEEEEEEcCCceeee-ecCCCCCCCCCcEEEE-EC
Q 045569 190 STNSWR-YCDCFKSNHYYMDGAFDSVYL--DGVCYWLSEFRDNDHKVILSFHLGNEVFEE-IQEPYIPESTPTILGI-YN 264 (362)
Q Consensus 190 ~~~~W~-~~~~~~~~~~~~~~~~~~v~~--~G~lywl~~~~~~~~~~il~fD~~~e~~~~-i~~P~~~~~~~~~l~~-~~ 264 (362)
+++.-. ...... .+ -..+.+ +|.+...... ...|..+|+.+.+... +..... .....+.. .+
T Consensus 137 ~~~~~~~~~~~~~--~~-----v~~~~~~~~~~~l~~~~~----d~~i~~wd~~~~~~~~~~~~~~~--~~~~~~~~~~~ 203 (312)
T 4ery_A 137 KTGKCLKTLPAHS--DP-----VSAVHFNRDGSLIVSSSY----DGLCRIWDTASGQCLKTLIDDDN--PPVSFVKFSPN 203 (312)
T ss_dssp TTCCEEEEECCCS--SC-----EEEEEECTTSSEEEEEET----TSCEEEEETTTCCEEEEECCSSC--CCEEEEEECTT
T ss_pred CCCEEEEEecCCC--Cc-----EEEEEEcCCCCEEEEEeC----CCcEEEEECCCCceeeEEeccCC--CceEEEEECCC
Confidence 775321 111110 01 111222 3443333322 2368889988765432 221111 11012222 25
Q ss_pred CeEEEEEEcCCCCeEEEEEeeCCeeEEEEEeCCC-CCcee-eEEE-eeCCcEEEEe-cCCeEEEEeCCCCcEE
Q 045569 265 HSLCLLLSHNIENYYDIWVMKYKCWIKQLSLGPL-NGVRT-PLGF-WKKGAFFVHS-TNEQLLLYDPNTQEMR 333 (362)
Q Consensus 265 g~L~l~~~~~~~~~~~IW~l~~~~W~~~~~i~~~-~~~~~-~~~~-~~~g~il~~~-~~~~~~~yd~~~~~~~ 333 (362)
|+..+++. ....+.||-+.... ....+... ..... ...+ ..++.+++.. .++.+.+||+++++..
T Consensus 204 ~~~l~~~~--~d~~i~iwd~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~ 272 (312)
T 4ery_A 204 GKYILAAT--LDNTLKLWDYSKGK--CLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIV 272 (312)
T ss_dssp SSEEEEEE--TTTEEEEEETTTTE--EEEEECSSCCSSSCCCEEEECSSSCEEEECCTTSCEEEEETTTCCEE
T ss_pred CCEEEEEc--CCCeEEEEECCCCc--EEEEEEecCCceEEEEEEEEeCCCcEEEEECCCCEEEEEECCCchhh
Confidence 55555554 46789999987633 22223211 11111 1112 2345665554 3778999999988754
No 198
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=35.73 E-value=2.3e+02 Score=24.97 Aligned_cols=193 Identities=10% Similarity=0.072 Sum_probs=90.0
Q ss_pred eeeeeEEEeecCceEEEEeCCCcccccCCCCCcCCCCcccceeeeeeeeecCCCCCeEEEEEEEEeecccccccCcceEE
Q 045569 106 PYNGIFCIFGNNNRITLWNRATKESRVLPKCTTVFPKYTSIFCKCTGFGLDPMSTDYKLVLIFTLWNEKLDLLYEFSHVA 185 (362)
Q Consensus 106 s~~GLl~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~e 185 (362)
+.+|+++..+.++.+.|||..+++....-.... .. ...+.+.+..+.-.++... . ...+.
T Consensus 171 ~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~h~---~~------v~~l~~~~~~~~~~l~s~s---~--------d~~i~ 230 (464)
T 3v7d_B 171 AHGGILVSGSTDRTVRVWDIKKGCCTHVFEGHN---ST------VRCLDIVEYKNIKYIVTGS---R--------DNTLH 230 (464)
T ss_dssp CSTTEEEEEETTSCEEEEETTTTEEEEEECCCS---SC------EEEEEEEESSSCEEEEEEE---T--------TSCEE
T ss_pred cCCCEEEEEeCCCCEEEEECCCCcEEEEECCCC---Cc------cEEEEEecCCCCCEEEEEc---C--------CCcEE
Confidence 445655555777779999999887543221111 11 3444444433333333332 1 12477
Q ss_pred EEECCCCCceecccCCC------------c--cccccC---CcceEEECceEEEEeeccCCCccEEEEEEcCCceeee-e
Q 045569 186 VYSLSTNSWRYCDCFKS------------N--HYYMDG---AFDSVYLDGVCYWLSEFRDNDHKVILSFHLGNEVFEE-I 247 (362)
Q Consensus 186 Vyss~~~~W~~~~~~~~------------~--~~~~~~---~~~~v~~~G~lywl~~~~~~~~~~il~fD~~~e~~~~-i 247 (362)
+++..++.-........ . .....+ ....+..+|........ ...|..+|+.+.+... +
T Consensus 231 vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~----d~~i~vwd~~~~~~~~~~ 306 (464)
T 3v7d_B 231 VWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTVSGHGNIVVSGSY----DNTLIVWDVAQMKCLYIL 306 (464)
T ss_dssp EEECCCCCCC------CCSSEEESCGGGCTTEEEEECCCSSCEEEEEEETTEEEEEET----TSCEEEEETTTTEEEEEE
T ss_pred EeeCCCCcccccccccCCcceEeeccCCCeEEEEEccCccceEEEEcCCCCEEEEEeC----CCeEEEEECCCCcEEEEe
Confidence 88877653221100000 0 000000 11223334443333332 3468889988765432 3
Q ss_pred cCCCCCCCCCcEEEE-ECCeEEEEEEcCCCCeEEEEEeeCCeeEEEEEeCCCCCceeeEEEeeCCcEEE-EecCCeEEEE
Q 045569 248 QEPYIPESTPTILGI-YNHSLCLLLSHNIENYYDIWVMKYKCWIKQLSLGPLNGVRTPLGFWKKGAFFV-HSTNEQLLLY 325 (362)
Q Consensus 248 ~~P~~~~~~~~~l~~-~~g~L~l~~~~~~~~~~~IW~l~~~~W~~~~~i~~~~~~~~~~~~~~~g~il~-~~~~~~~~~y 325 (362)
..... ....+.. .+|...+++. ....+.||-++.. .....+.........+.+ ++..++ ...++.+..|
T Consensus 307 ~~~~~---~v~~~~~~~~~~~l~sg~--~dg~i~vwd~~~~--~~~~~~~~h~~~v~~~~~--~~~~l~s~s~dg~v~vw 377 (464)
T 3v7d_B 307 SGHTD---RIYSTIYDHERKRCISAS--MDTTIRIWDLENG--ELMYTLQGHTALVGLLRL--SDKFLVSAAADGSIRGW 377 (464)
T ss_dssp CCCSS---CEEEEEEETTTTEEEEEE--TTSCEEEEETTTT--EEEEEECCCSSCEEEEEE--CSSEEEEEETTSEEEEE
T ss_pred cCCCC---CEEEEEEcCCCCEEEEEe--CCCcEEEEECCCC--cEEEEEeCCCCcEEEEEE--cCCEEEEEeCCCcEEEE
Confidence 22111 1123332 3556555555 4578999988763 233444322211122222 344444 3447778888
Q ss_pred eCCCCc
Q 045569 326 DPNTQE 331 (362)
Q Consensus 326 d~~~~~ 331 (362)
|+++.+
T Consensus 378 d~~~~~ 383 (464)
T 3v7d_B 378 DANDYS 383 (464)
T ss_dssp ETTTCC
T ss_pred ECCCCc
Confidence 888765
No 199
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=35.52 E-value=3.8e+02 Score=27.49 Aligned_cols=191 Identities=9% Similarity=0.118 Sum_probs=95.5
Q ss_pred eeeeeEEEe-ecCceEEEEeCCCccccc-CCCCCcCCCCcccceeeeeeeeecCCCCCeEEEEEEEEeecccccccCcce
Q 045569 106 PYNGIFCIF-GNNNRITLWNRATKESRV-LPKCTTVFPKYTSIFCKCTGFGLDPMSTDYKLVLIFTLWNEKLDLLYEFSH 183 (362)
Q Consensus 106 s~~GLl~~~-~~~~~~~V~NP~T~~~~~-LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~~~ 183 (362)
+.+|-++.. +.++.+.|||..|++... +... .. ....+.+.|.. .+ +.... . ...
T Consensus 624 s~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~h-----~~-----~v~~~~~s~~~-~~--l~s~~---~-------d~~ 680 (1249)
T 3sfz_A 624 SQDGQRIASCGADKTLQVFKAETGEKLLDIKAH-----ED-----EVLCCAFSSDD-SY--IATCS---A-------DKK 680 (1249)
T ss_dssp CTTSSEEEEEETTSCEEEEETTTCCEEEEECCC-----SS-----CEEEEEECTTS-SE--EEEEE---T-------TSE
T ss_pred CCCCCEEEEEeCCCeEEEEECCCCCEEEEeccC-----CC-----CEEEEEEecCC-CE--EEEEe---C-------CCe
Confidence 334544444 666679999999987543 3311 11 14566676643 33 22221 1 135
Q ss_pred EEEEECCCCCceec-ccCCCccccccCCcceEEEC---ceEEEEeeccCCCccEEEEEEcCCceeee-ecCCCCCCCCCc
Q 045569 184 VAVYSLSTNSWRYC-DCFKSNHYYMDGAFDSVYLD---GVCYWLSEFRDNDHKVILSFHLGNEVFEE-IQEPYIPESTPT 258 (362)
Q Consensus 184 ~eVyss~~~~W~~~-~~~~~~~~~~~~~~~~v~~~---G~lywl~~~~~~~~~~il~fD~~~e~~~~-i~~P~~~~~~~~ 258 (362)
+.|++..++.-... .... .. -..+.+. +..+...... ...|..+|+.+.+... +.... ....
T Consensus 681 v~vwd~~~~~~~~~~~~~~--~~-----v~~~~~~~~~~~~~l~sg~~---d~~v~vwd~~~~~~~~~~~~h~---~~v~ 747 (1249)
T 3sfz_A 681 VKIWDSATGKLVHTYDEHS--EQ-----VNCCHFTNKSNHLLLATGSN---DFFLKLWDLNQKECRNTMFGHT---NSVN 747 (1249)
T ss_dssp EEEEETTTCCEEEEEECCS--SC-----EEEEEECSSSSCCEEEEEET---TSCEEEEETTSSSEEEEECCCS---SCEE
T ss_pred EEEEECCCCceEEEEcCCC--Cc-----EEEEEEecCCCceEEEEEeC---CCeEEEEECCCcchhheecCCC---CCEE
Confidence 89999887743221 1110 00 1112221 1112222221 3468888888765432 22111 1102
Q ss_pred EEEE-ECCeEEEEEEcCCCCeEEEEEeeCCeeEEEEEeCCC-----------CCceeeEEEeeCCcEEEEecCCeEEEEe
Q 045569 259 ILGI-YNHSLCLLLSHNIENYYDIWVMKYKCWIKQLSLGPL-----------NGVRTPLGFWKKGAFFVHSTNEQLLLYD 326 (362)
Q Consensus 259 ~l~~-~~g~L~l~~~~~~~~~~~IW~l~~~~W~~~~~i~~~-----------~~~~~~~~~~~~g~il~~~~~~~~~~yd 326 (362)
.+.. -+|...+++. ....+.+|.++...-......... ......+.+..+|..++...++.+..||
T Consensus 748 ~~~~sp~~~~l~s~s--~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~~~v~~~d 825 (1249)
T 3sfz_A 748 HCRFSPDDELLASCS--ADGTLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAAKNKVLLFD 825 (1249)
T ss_dssp EEEECSSTTEEEEEE--SSSEEEEEEGGGTEEEEEEECCCCC--------CCCCCBCCCCBCTTSSEEEEEETTEEEEEE
T ss_pred EEEEecCCCEEEEEE--CCCeEEEEeCCCCcccceecccccccccCCccccccceEEEEEECCCCCEEEEEcCCcEEEEE
Confidence 2322 2566555554 467899999977332222222110 0012233445678877777788999999
Q ss_pred CCCCcEEE
Q 045569 327 PNTQEMRD 334 (362)
Q Consensus 327 ~~~~~~~~ 334 (362)
..++....
T Consensus 826 ~~~~~~~~ 833 (1249)
T 3sfz_A 826 IHTSGLLA 833 (1249)
T ss_dssp TTTCCEEE
T ss_pred ecCCCcee
Confidence 98877544
No 200
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=34.59 E-value=2.9e+02 Score=25.83 Aligned_cols=191 Identities=11% Similarity=0.058 Sum_probs=95.4
Q ss_pred eeeEEEe-ecCceEEEEeCCCcccc-cCCCCCcCCCCcccceeeeeeeeecCCCCCeEEEEEEEEeecccccccCcceEE
Q 045569 108 NGIFCIF-GNNNRITLWNRATKESR-VLPKCTTVFPKYTSIFCKCTGFGLDPMSTDYKLVLIFTLWNEKLDLLYEFSHVA 185 (362)
Q Consensus 108 ~GLl~~~-~~~~~~~V~NP~T~~~~-~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~e 185 (362)
++++.+. ...+.+.|+|+.|++.+ .+|.... ..++.++|.. .|-.+. . . .-.+.
T Consensus 166 ~~~~~V~~~~~~~V~viD~~t~~v~~~i~~g~~-----------p~~v~~SpDG-r~lyv~-~---~--------dg~V~ 221 (567)
T 1qks_A 166 ENLFSVTLRDAGQIALIDGSTYEIKTVLDTGYA-----------VHISRLSASG-RYLFVI-G---R--------DGKVN 221 (567)
T ss_dssp GGEEEEEETTTTEEEEEETTTCCEEEEEECSSC-----------EEEEEECTTS-CEEEEE-E---T--------TSEEE
T ss_pred CceEEEEeCCCCeEEEEECCCCeEEEEEeCCCC-----------ccceEECCCC-CEEEEE-c---C--------CCeEE
Confidence 3455555 55667999999998765 3443221 3466777644 343332 1 1 12588
Q ss_pred EEECCCCCceecccCCCccccccCCcceEEE------CceEEEEeeccCCCccEEEEEEcCCcee-eeecCCCCCCC---
Q 045569 186 VYSLSTNSWRYCDCFKSNHYYMDGAFDSVYL------DGVCYWLSEFRDNDHKVILSFHLGNEVF-EEIQEPYIPES--- 255 (362)
Q Consensus 186 Vyss~~~~W~~~~~~~~~~~~~~~~~~~v~~------~G~lywl~~~~~~~~~~il~fD~~~e~~-~~i~~P~~~~~--- 255 (362)
+|+..+.+-+.+...+... ...++.+ +|+.-+..... ...+..+|..+.+- ..++.......
T Consensus 222 viD~~~~t~~~v~~i~~G~-----~P~~ia~s~~~~pDGk~l~v~n~~---~~~v~ViD~~t~~~~~~i~~~~~~~~~~~ 293 (567)
T 1qks_A 222 MIDLWMKEPTTVAEIKIGS-----EARSIETSKMEGWEDKYAIAGAYW---PPQYVIMDGETLEPKKIQSTRGMTYDEQE 293 (567)
T ss_dssp EEETTSSSCCEEEEEECCS-----EEEEEEECCSTTCTTTEEEEEEEE---TTEEEEEETTTCCEEEEEECCEECTTTCC
T ss_pred EEECCCCCCcEeEEEecCC-----CCceeEEccccCCCCCEEEEEEcc---CCeEEEEECCCCcEEEEEecccccccccc
Confidence 8888522223222211100 0122222 57544444332 34788999877544 34554321100
Q ss_pred -----CCcEEEEE-CCeEEEEEEcCCCCeEEEEEeeC--CeeEEEEEeCCCCCceeeEEEeeCCcEEEEe--cCCeEEEE
Q 045569 256 -----TPTILGIY-NHSLCLLLSHNIENYYDIWVMKY--KCWIKQLSLGPLNGVRTPLGFWKKGAFFVHS--TNEQLLLY 325 (362)
Q Consensus 256 -----~~~~l~~~-~g~L~l~~~~~~~~~~~IW~l~~--~~W~~~~~i~~~~~~~~~~~~~~~g~il~~~--~~~~~~~y 325 (362)
....+... ++...++... ... .||+.+- ....++..|+.. ...+..++..+|+.++.. ..+++.++
T Consensus 294 ~~p~~rva~i~~s~~~~~~vv~~~-~~g--~v~~vd~~~~~~~~v~~i~~~-~~~~d~~~~pdgr~~~va~~~sn~V~Vi 369 (567)
T 1qks_A 294 YHPEPRVAAILASHYRPEFIVNVK-ETG--KILLVDYTDLNNLKTTEISAE-RFLHDGGLDGSHRYFITAANARNKLVVI 369 (567)
T ss_dssp EESCCCEEEEEECSSSSEEEEEET-TTT--EEEEEETTCSSEEEEEEEECC-SSEEEEEECTTSCEEEEEEGGGTEEEEE
T ss_pred ccCCCceEEEEEcCCCCEEEEEec-CCC--eEEEEecCCCccceeeeeecc-ccccCceECCCCCEEEEEeCCCCeEEEE
Confidence 00122222 2233333332 223 4454443 334455555432 234455666677765543 36789999
Q ss_pred eCCCCcEEE
Q 045569 326 DPNTQEMRD 334 (362)
Q Consensus 326 d~~~~~~~~ 334 (362)
|.+++++..
T Consensus 370 D~~t~kl~~ 378 (567)
T 1qks_A 370 DTKEGKLVA 378 (567)
T ss_dssp ETTTTEEEE
T ss_pred ECCCCcEEE
Confidence 999988753
No 201
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=34.49 E-value=2.9e+02 Score=25.83 Aligned_cols=191 Identities=9% Similarity=-0.021 Sum_probs=96.2
Q ss_pred ceEEEEeCCC------cccccCC-CCCcCCCCcccceeeeeeeeecCCCCCeEEEEEEEEeecccccccCcceEEEEECC
Q 045569 118 NRITLWNRAT------KESRVLP-KCTTVFPKYTSIFCKCTGFGLDPMSTDYKLVLIFTLWNEKLDLLYEFSHVAVYSLS 190 (362)
Q Consensus 118 ~~~~V~NP~T------~~~~~LP-~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~eVyss~ 190 (362)
..++++|..+ ++...|. ... .. .....+.|.. ++ ++... .... ........+.+++..
T Consensus 161 ~~i~~~~~~~~~~~~~~~~~~l~~~~~----~~------~~~~~~SpDG-~~-la~~~--~~~~-~~~~~~~~i~~~d~~ 225 (662)
T 3azo_A 161 RFLAAVPLDGSAAADRSAVRELSDDAH----RF------VTGPRLSPDG-RQ-AVWLA--WDHP-RMPWEGTELKTARVT 225 (662)
T ss_dssp EEEEEEETTSTTTTCGGGSEESSCSCS----SE------ECCCEECTTS-SE-EEEEE--ECTT-CCTTTCEEEEEEEEC
T ss_pred eEEEEEECCCCccccCCceeEEEecCC----Cc------ccCceECCCC-CE-EEEEE--CCCC-CCCCCCcEEEEEEEC
Confidence 4699999998 7766665 221 11 3344555543 22 22221 1111 000012468888888
Q ss_pred -CCC---ceecccCCCccccccCCcceE-EECceEEEEeeccCCCccEEEEEEcCCceeeee-cCCCCCCC-CC----cE
Q 045569 191 -TNS---WRYCDCFKSNHYYMDGAFDSV-YLDGVCYWLSEFRDNDHKVILSFHLGNEVFEEI-QEPYIPES-TP----TI 259 (362)
Q Consensus 191 -~~~---W~~~~~~~~~~~~~~~~~~~v-~~~G~lywl~~~~~~~~~~il~fD~~~e~~~~i-~~P~~~~~-~~----~~ 259 (362)
++. .+.+..... ... .... .-+|.+|+..... ....|..+|+.+.++..+ +....... .+ ..
T Consensus 226 ~~g~~~~~~~l~~~~~-~~~----~~~~~spdg~l~~~~~~~--~~~~l~~~~~~~~~~~~l~~~~~~~~~p~w~~~~~~ 298 (662)
T 3azo_A 226 EDGRFADTRTLLGGPE-EAI----AQAEWAPDGSLIVATDRT--GWWNLHRVDPATGAATQLCRREEEFAGPLWTPGMRW 298 (662)
T ss_dssp TTSCEEEEEEEEEETT-BCE----EEEEECTTSCEEEEECTT--SSCEEEEECTTTCCEEESSCCSSBSSCCCCSTTCCS
T ss_pred CCCcccccEEeCCCCC-ceE----cceEECCCCeEEEEECCC--CCeEEEEEECCCCceeecccccccccCccccccCce
Confidence 563 333322110 000 1122 2378888776543 245799999987777654 22221110 00 12
Q ss_pred EEEE-CCeEEEEEEcCCCCeEEEEEeeC--CeeEEEEEeCCCCCceeeEEEeeCCcEEEEec-C---CeEEEEeCCCCcE
Q 045569 260 LGIY-NHSLCLLLSHNIENYYDIWVMKY--KCWIKQLSLGPLNGVRTPLGFWKKGAFFVHST-N---EQLLLYDPNTQEM 332 (362)
Q Consensus 260 l~~~-~g~L~l~~~~~~~~~~~IW~l~~--~~W~~~~~i~~~~~~~~~~~~~~~g~il~~~~-~---~~~~~yd~~~~~~ 332 (362)
+... +|++.+... . ....||.++- +. ...+.........+.....+.+++... . ..++.+|+++++.
T Consensus 299 ~~~~~~~~~~~~~~--~-~~~~l~~~d~~~~~---~~~l~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~i~~~d~~~g~~ 372 (662)
T 3azo_A 299 FAPLANGLIAVVHG--K-GAAVLGILDPESGE---LVDAAGPWTEWAATLTVSGTRAVGVAASPRTAYEVVELDTVTGRA 372 (662)
T ss_dssp EEECTTSCEEEEEB--S-SSCEEEEEETTTTE---EEECCSSCCEEEEEEEEETTEEEEEEEETTEEEEEEEEETTTCCE
T ss_pred EeEeCCCEEEEEEE--c-CccEEEEEECCCCc---EEEecCCCCeEEEEEecCCCEEEEEEcCCCCCCEEEEEECCCCce
Confidence 3333 677665554 3 6789998875 43 233432222223331223445655543 2 3688899988887
Q ss_pred EEee
Q 045569 333 RDLG 336 (362)
Q Consensus 333 ~~v~ 336 (362)
+.+.
T Consensus 373 ~~l~ 376 (662)
T 3azo_A 373 RTIG 376 (662)
T ss_dssp EEEE
T ss_pred EEee
Confidence 7653
No 202
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=34.45 E-value=2e+02 Score=23.79 Aligned_cols=65 Identities=11% Similarity=0.156 Sum_probs=39.0
Q ss_pred CCeEEEEEEcCCCCeEEEEEeeCCeeEEEEEeCCCCCceeeEEEeeCCcEEEEe-cCCeEEEEeCCCCcE
Q 045569 264 NHSLCLLLSHNIENYYDIWVMKYKCWIKQLSLGPLNGVRTPLGFWKKGAFFVHS-TNEQLLLYDPNTQEM 332 (362)
Q Consensus 264 ~g~L~l~~~~~~~~~~~IW~l~~~~W~~~~~i~~~~~~~~~~~~~~~g~il~~~-~~~~~~~yd~~~~~~ 332 (362)
+|.+.+.+. ....+.||-++... ....+.........+.+..++..++.. .++.+.+||.++++.
T Consensus 24 ~~~~l~s~~--~dg~v~lWd~~~~~--~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~ 89 (304)
T 2ynn_A 24 TEPWVLTTL--YSGRVELWNYETQV--EVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGEK 89 (304)
T ss_dssp SSSEEEEEE--TTSEEEEEETTTTE--EEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTCCE
T ss_pred CCCEEEEEc--CCCcEEEEECCCCc--eeEEeeccCCcEEEEEEeCCCCEEEEECCCCEEEEEECCCCcE
Confidence 455544444 45789999887643 233333222222344555666665554 477899999988764
No 203
>1egx_A VAsp, vasodilator-stimulated phosphoprotein; EVH1, VAsp-ENA, poly-proline-binding domain, signaling protein; NMR {Homo sapiens} SCOP: b.55.1.4
Probab=33.80 E-value=52 Score=23.59 Aligned_cols=42 Identities=14% Similarity=0.135 Sum_probs=29.3
Q ss_pred eEEEEeCCCcccccCCCCCcCCCCcccceeeeeeeeecCCCCCeEEEEEE
Q 045569 119 RITLWNRATKESRVLPKCTTVFPKYTSIFCKCTGFGLDPMSTDYKLVLIF 168 (362)
Q Consensus 119 ~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~ 168 (362)
.+++++|.|++|. |...... + ...+.|..|...+.|.|+...
T Consensus 12 ~V~~~d~~~~~W~--p~~~g~~--g----vs~V~~~~d~~~~~yrI~~~~ 53 (115)
T 1egx_A 12 TVMLYDDGNKRWL--PAGTGPQ--A----FSRVQIYHNPTANSFRVVGRK 53 (115)
T ss_dssp ECBEECTTTSSCC--BSSCSCC--C----CEEEEEEEETTTTEEEEEEEE
T ss_pred EEEEEcCCCCcee--ECCCCCC--C----ccEEEEEEeCCCCEEEEEEEE
Confidence 4788999999974 4432101 1 124788889989999999874
No 204
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=33.00 E-value=2.6e+02 Score=24.70 Aligned_cols=201 Identities=11% Similarity=0.053 Sum_probs=99.8
Q ss_pred ceEeeeeeeeEEEe-ecCceEEEEeCCCcccccCCCCCcCCCCcccceeeeeeeeecCCCCCeEEEEEEEEeeccccccc
Q 045569 101 GELVGPYNGIFCIF-GNNNRITLWNRATKESRVLPKCTTVFPKYTSIFCKCTGFGLDPMSTDYKLVLIFTLWNEKLDLLY 179 (362)
Q Consensus 101 ~~~~~s~~GLl~~~-~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~ 179 (362)
..+.-..+|-|.+. .....+.+++|.+++...+..... . .. +++++..+ .++... ...
T Consensus 134 ~~la~d~~g~lyv~d~~~~~I~~id~~~g~~~~~~~~~~----~------~~-ia~~~~g~--~l~~~d--~~~------ 192 (409)
T 3hrp_A 134 WGIAAVGNNTVLAYQRDDPRVRLISVDDNKVTTVHPGFK----G------GK-PAVTKDKQ--RVYSIG--WEG------ 192 (409)
T ss_dssp EEEEECSTTEEEEEETTTTEEEEEETTTTEEEEEEETCC----B------CB-CEECTTSS--EEEEEB--SST------
T ss_pred eEEEEeCCCCEEEEecCCCcEEEEECCCCEEEEeeccCC----C------Cc-eeEecCCC--cEEEEe--cCC------
Confidence 34444466776666 344679999999988766543211 1 12 55666543 222221 100
Q ss_pred CcceEEEEECCCCC-ceecccCCC-ccccccCCcceEEE---CceEEEEeeccCCCccEEEEEEcCCceeeeec---CCC
Q 045569 180 EFSHVAVYSLSTNS-WRYCDCFKS-NHYYMDGAFDSVYL---DGVCYWLSEFRDNDHKVILSFHLGNEVFEEIQ---EPY 251 (362)
Q Consensus 180 ~~~~~eVyss~~~~-W~~~~~~~~-~~~~~~~~~~~v~~---~G~lywl~~~~~~~~~~il~fD~~~e~~~~i~---~P~ 251 (362)
...+.+++..++. .+.+..... ... ...++.+ +|.+|+... ...|..+|+.+.....+. ...
T Consensus 193 -~~~I~~~d~~~~~~~~~~g~~~~~~~~----~p~~iav~p~~g~lyv~d~-----~~~I~~~d~~~~~~~~~~~~~~~g 262 (409)
T 3hrp_A 193 -THTVYVYMKASGWAPTRIGQLGSTFSG----KIGAVALDETEEWLYFVDS-----NKNFGRFNVKTQEVTLIKQLELSG 262 (409)
T ss_dssp -TCEEEEEEGGGTTCEEEEEECCTTSCS----CCCBCEECTTSSEEEEECT-----TCEEEEEETTTCCEEEEEECCCCS
T ss_pred -CceEEEEEcCCCceeEEeeeccchhcC----CcEEEEEeCCCCeEEEEEC-----CCcEEEEECCCCCEEEEecccccC
Confidence 1146666665432 223311111 011 1222333 689999332 237999999877655541 111
Q ss_pred CCCCCCc-EEEEE--CCeEEEEEEcCCCCeEEEEEeeC-CeeEEEEEeCCCC----------Cceee--EEEeeCCcEEE
Q 045569 252 IPESTPT-ILGIY--NHSLCLLLSHNIENYYDIWVMKY-KCWIKQLSLGPLN----------GVRTP--LGFWKKGAFFV 315 (362)
Q Consensus 252 ~~~~~~~-~l~~~--~g~L~l~~~~~~~~~~~IW~l~~-~~W~~~~~i~~~~----------~~~~~--~~~~~~g~il~ 315 (362)
....... .++.. +|.|++... .... |++++. ..-.....-.... .+..| +++..+|.||+
T Consensus 263 ~~~~~P~~~ia~~p~~g~lyv~d~--~~~~--I~~~~~~g~~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyv 338 (409)
T 3hrp_A 263 SLGTNPGPYLIYYFVDSNFYMSDQ--NLSS--VYKITPDGECEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYI 338 (409)
T ss_dssp CCCCSSCCEEEEETTTTEEEEEET--TTTE--EEEECTTCCEEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEE
T ss_pred CCCCCccccEEEeCCCCEEEEEeC--CCCE--EEEEecCCCEEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEE
Confidence 1111112 45554 577877654 2344 444443 2211111111000 02234 45556788888
Q ss_pred Eec--CCeEEEEeCCCCcEEEee
Q 045569 316 HST--NEQLLLYDPNTQEMRDLG 336 (362)
Q Consensus 316 ~~~--~~~~~~yd~~~~~~~~v~ 336 (362)
... ..++..+|+.++++..+.
T Consensus 339 ad~~~~~~I~~~~~~~G~v~~~~ 361 (409)
T 3hrp_A 339 VDGFKGYCLRKLDILDGYVSTVA 361 (409)
T ss_dssp EETTTTCEEEEEETTTTEEEEEE
T ss_pred EeCCCCCEEEEEECCCCEEEEEe
Confidence 764 567999997777766554
No 205
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=32.91 E-value=3.2e+02 Score=25.86 Aligned_cols=92 Identities=16% Similarity=0.154 Sum_probs=44.3
Q ss_pred cEEEEEEcCCceeeeecCCCCCCCCCcEEEEECCeEEEEEEcCCCCeEEEEEeeCCeeEEEEEeCCCC------------
Q 045569 232 KVILSFHLGNEVFEEIQEPYIPESTPTILGIYNHSLCLLLSHNIENYYDIWVMKYKCWIKQLSLGPLN------------ 299 (362)
Q Consensus 232 ~~il~fD~~~e~~~~i~~P~~~~~~~~~l~~~~g~L~l~~~~~~~~~~~IW~l~~~~W~~~~~i~~~~------------ 299 (362)
..|..+|+.+.+-.. .+... .....+....+...++... ...+.||-++...=..........
T Consensus 583 g~i~iwd~~~~~~~~-~~~~~--~~v~~~~~sp~~~~l~~~~--~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 657 (694)
T 3dm0_A 583 GVVLLWDLAEGKKLY-SLEAN--SVIHALCFSPNRYWLCAAT--EHGIKIWDLESKSIVEDLKVDLKAEAEKADNSGPAA 657 (694)
T ss_dssp SBCEEEETTTTEEEE-CCBCS--SCEEEEEECSSSSEEEEEE--TTEEEEEETTTTEEEEEECCCCC-------------
T ss_pred CeEEEEECCCCceEE-EecCC--CcEEEEEEcCCCcEEEEEc--CCCEEEEECCCCCChhhhcccccccccccccccccc
Confidence 468888887765321 12111 1112333333333333332 456999998763222222111100
Q ss_pred ---C--ceeeEEEeeCCcEEEEe-cCCeEEEEeCC
Q 045569 300 ---G--VRTPLGFWKKGAFFVHS-TNEQLLLYDPN 328 (362)
Q Consensus 300 ---~--~~~~~~~~~~g~il~~~-~~~~~~~yd~~ 328 (362)
. ....+.+..+|..++.. .++.+.+||+.
T Consensus 658 ~~~~~~~~~~l~~spdg~~l~sgs~Dg~i~iW~i~ 692 (694)
T 3dm0_A 658 TKRKVIYCTSLNWSADGSTLFSGYTDGVIRVWGIG 692 (694)
T ss_dssp ---CCCCEEEEEECTTSSEEEEEETTSEEEEEEC-
T ss_pred CCceeEEeeeEEEcCCCCEEEEEcCCCeEEEEecc
Confidence 0 01234455677777665 47788899875
No 206
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=32.24 E-value=2.4e+02 Score=24.04 Aligned_cols=181 Identities=10% Similarity=0.043 Sum_probs=86.2
Q ss_pred eEEEeecCceEEEEeCCCcccccCCCCCcCCCCcccceeeeeeeeecCCCCCeEEEEEEEEeecccccccCcceEEEEEC
Q 045569 110 IFCIFGNNNRITLWNRATKESRVLPKCTTVFPKYTSIFCKCTGFGLDPMSTDYKLVLIFTLWNEKLDLLYEFSHVAVYSL 189 (362)
Q Consensus 110 Ll~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~eVyss 189 (362)
.|+..+.+..+.+||..+++....-. .+.. ....+.+.+..+.-.++... . ...+.+++.
T Consensus 168 ~l~t~s~D~~v~lwd~~~~~~~~~~~----~h~~-----~v~~~~~~~~~~g~~l~sgs---~--------Dg~v~~wd~ 227 (354)
T 2pbi_B 168 QILTASGDGTCALWDVESGQLLQSFH----GHGA-----DVLCLDLAPSETGNTFVSGG---C--------DKKAMVWDM 227 (354)
T ss_dssp EEEEEETTSEEEEEETTTCCEEEEEE----CCSS-----CEEEEEECCCSSCCEEEEEE---T--------TSCEEEEET
T ss_pred EEEEEeCCCcEEEEeCCCCeEEEEEc----CCCC-----CeEEEEEEeCCCCCEEEEEe---C--------CCeEEEEEC
Confidence 33333566679999998887542111 0111 13445555543322333322 1 135888988
Q ss_pred CCCCceec-ccCCCccccccCCcceEEE--CceEEEEeeccCCCccEEEEEEcCCceeee-ecCCCCCCCCCcEEE-EEC
Q 045569 190 STNSWRYC-DCFKSNHYYMDGAFDSVYL--DGVCYWLSEFRDNDHKVILSFHLGNEVFEE-IQEPYIPESTPTILG-IYN 264 (362)
Q Consensus 190 ~~~~W~~~-~~~~~~~~~~~~~~~~v~~--~G~lywl~~~~~~~~~~il~fD~~~e~~~~-i~~P~~~~~~~~~l~-~~~ 264 (362)
+++..... .... .. -.++.+ +|........ ...|..+|+.+.+-.. +...... .....+. ..+
T Consensus 228 ~~~~~~~~~~~h~--~~-----v~~v~~~p~~~~l~s~s~----D~~v~lwd~~~~~~~~~~~~~~~~-~~~~~~~~s~~ 295 (354)
T 2pbi_B 228 RSGQCVQAFETHE--SD-----VNSVRYYPSGDAFASGSD----DATCRLYDLRADREVAIYSKESII-FGASSVDFSLS 295 (354)
T ss_dssp TTCCEEEEECCCS--SC-----EEEEEECTTSSEEEEEET----TSCEEEEETTTTEEEEEECCTTCC-SCEEEEEECTT
T ss_pred CCCcEEEEecCCC--CC-----eEEEEEeCCCCEEEEEeC----CCeEEEEECCCCcEEEEEcCCCcc-cceeEEEEeCC
Confidence 87653221 1100 00 122222 3443333322 2368888987654322 2221111 1101222 235
Q ss_pred CeEEEEEEcCCCCeEEEEEeeCCeeEEEEEeCCCCCceeeEEEeeCCcEEEEec-CCeEEEEe
Q 045569 265 HSLCLLLSHNIENYYDIWVMKYKCWIKQLSLGPLNGVRTPLGFWKKGAFFVHST-NEQLLLYD 326 (362)
Q Consensus 265 g~L~l~~~~~~~~~~~IW~l~~~~W~~~~~i~~~~~~~~~~~~~~~g~il~~~~-~~~~~~yd 326 (362)
|.+.+++. ....+.||-+... .....+.........+.+..+|..++... ++.+.+||
T Consensus 296 g~~l~~g~--~d~~i~vwd~~~~--~~~~~l~~h~~~v~~l~~spdg~~l~sgs~D~~v~vW~ 354 (354)
T 2pbi_B 296 GRLLFAGY--NDYTINVWDVLKG--SRVSILFGHENRVSTLRVSPDGTAFCSGSWDHTLRVWA 354 (354)
T ss_dssp SSEEEEEE--TTSCEEEEETTTC--SEEEEECCCSSCEEEEEECTTSSCEEEEETTSEEEEEC
T ss_pred CCEEEEEE--CCCcEEEEECCCC--ceEEEEECCCCcEEEEEECCCCCEEEEEcCCCCEEecC
Confidence 77666665 4678999988652 23333432222233455556776665543 66677764
No 207
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=32.06 E-value=2.5e+02 Score=24.27 Aligned_cols=193 Identities=9% Similarity=0.116 Sum_probs=91.1
Q ss_pred eeeeeEEEe-ecCceEEEEeCCCcccccCCCCCcCCCCcccceeeeeeeeecCCCCCeEEEEEEEEeecccccccCcceE
Q 045569 106 PYNGIFCIF-GNNNRITLWNRATKESRVLPKCTTVFPKYTSIFCKCTGFGLDPMSTDYKLVLIFTLWNEKLDLLYEFSHV 184 (362)
Q Consensus 106 s~~GLl~~~-~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~ 184 (362)
+.+|-.++. +.++.+.|||..+++....-.. +.. ....+.+.|..+ + ++... . ...+
T Consensus 132 s~dg~~l~s~~~d~~i~iwd~~~~~~~~~~~~----h~~-----~v~~~~~~p~~~-~-l~s~s----~-------d~~v 189 (393)
T 1erj_A 132 SPDGKFLATGAEDRLIRIWDIENRKIVMILQG----HEQ-----DIYSLDYFPSGD-K-LVSGS----G-------DRTV 189 (393)
T ss_dssp CTTSSEEEEEETTSCEEEEETTTTEEEEEECC----CSS-----CEEEEEECTTSS-E-EEEEE----T-------TSEE
T ss_pred CCCCCEEEEEcCCCeEEEEECCCCcEEEEEcc----CCC-----CEEEEEEcCCCC-E-EEEec----C-------CCcE
Confidence 335544444 6666799999988875432111 111 145666766432 2 22221 1 1358
Q ss_pred EEEECCCCCceecccCCCccccccCCcceEEE---CceEEEEeeccCCCccEEEEEEcCCceee-eecCCCCC--C-CCC
Q 045569 185 AVYSLSTNSWRYCDCFKSNHYYMDGAFDSVYL---DGVCYWLSEFRDNDHKVILSFHLGNEVFE-EIQEPYIP--E-STP 257 (362)
Q Consensus 185 eVyss~~~~W~~~~~~~~~~~~~~~~~~~v~~---~G~lywl~~~~~~~~~~il~fD~~~e~~~-~i~~P~~~--~-~~~ 257 (362)
.+++.+++.-...-.... . ...+.+ +|.+...... ...|..+|+.+.... .+..+... . ...
T Consensus 190 ~iwd~~~~~~~~~~~~~~--~-----v~~~~~~~~~~~~l~~~s~----d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~ 258 (393)
T 1erj_A 190 RIWDLRTGQCSLTLSIED--G-----VTTVAVSPGDGKYIAAGSL----DRAVRVWDSETGFLVERLDSENESGTGHKDS 258 (393)
T ss_dssp EEEETTTTEEEEEEECSS--C-----EEEEEECSTTCCEEEEEET----TSCEEEEETTTCCEEEEEC------CCCSSC
T ss_pred EEEECCCCeeEEEEEcCC--C-----cEEEEEECCCCCEEEEEcC----CCcEEEEECCCCcEEEeecccccCCCCCCCC
Confidence 888888764332111000 0 111111 3443333332 236888898776542 33322211 1 111
Q ss_pred -cEEEE-ECCeEEEEEEcCCCCeEEEEEeeCCe----------eEEEEEeCCCCCceeeEEEeeCCcEEEEe-cCCeEEE
Q 045569 258 -TILGI-YNHSLCLLLSHNIENYYDIWVMKYKC----------WIKQLSLGPLNGVRTPLGFWKKGAFFVHS-TNEQLLL 324 (362)
Q Consensus 258 -~~l~~-~~g~L~l~~~~~~~~~~~IW~l~~~~----------W~~~~~i~~~~~~~~~~~~~~~g~il~~~-~~~~~~~ 324 (362)
..+.. -+|++.+.+. ....+.||-++... ......+.........+++..++..++.. .++.+..
T Consensus 259 v~~v~~~~~g~~l~s~s--~d~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~i 336 (393)
T 1erj_A 259 VYSVVFTRDGQSVVSGS--LDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLF 336 (393)
T ss_dssp EEEEEECTTSSEEEEEE--TTSEEEEEEC---------------CEEEEEECCSSCEEEEEECGGGCEEEEEETTSEEEE
T ss_pred EEEEEECCCCCEEEEEe--CCCEEEEEECCCCCCcccccCCCCCcceEEEecccCcEEEEEECCCCCEEEEEeCCCeEEE
Confidence 23332 2566555554 46799999987611 01111111111112234444566665554 4778999
Q ss_pred EeCCCCcEE
Q 045569 325 YDPNTQEMR 333 (362)
Q Consensus 325 yd~~~~~~~ 333 (362)
||.++++..
T Consensus 337 wd~~~~~~~ 345 (393)
T 1erj_A 337 WDKKSGNPL 345 (393)
T ss_dssp EETTTCCEE
T ss_pred EECCCCeEE
Confidence 999987643
No 208
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=31.89 E-value=2.2e+02 Score=23.63 Aligned_cols=95 Identities=7% Similarity=-0.015 Sum_probs=50.2
Q ss_pred cEEEEEEcCCce--eeeecCCCCCCCCC-cEEE-----EECCeEEEEEEcCCCCeEEEEEeeCCeeEEEEEeCCCCCcee
Q 045569 232 KVILSFHLGNEV--FEEIQEPYIPESTP-TILG-----IYNHSLCLLLSHNIENYYDIWVMKYKCWIKQLSLGPLNGVRT 303 (362)
Q Consensus 232 ~~il~fD~~~e~--~~~i~~P~~~~~~~-~~l~-----~~~g~L~l~~~~~~~~~~~IW~l~~~~W~~~~~i~~~~~~~~ 303 (362)
..|..+|+.+.. ...+..+....... ..+. ..+|.+.+++. ....+.+|-++... ........ ....
T Consensus 139 ~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~--~d~~i~i~d~~~~~--~~~~~~~~-~~v~ 213 (357)
T 3i2n_A 139 GTVKVWDPRQKDDPVANMEPVQGENKRDCWTVAFGNAYNQEERVVCAGY--DNGDIKLFDLRNMA--LRWETNIK-NGVC 213 (357)
T ss_dssp SCEEEECTTSCSSCSEEECCCTTSCCCCEEEEEEECCCC-CCCEEEEEE--TTSEEEEEETTTTE--EEEEEECS-SCEE
T ss_pred CeEEEEeCCCCCCcceeccccCCCCCCceEEEEEEeccCCCCCEEEEEc--cCCeEEEEECccCc--eeeecCCC-CceE
Confidence 368889988764 34444433321211 2222 14666666555 45799999987732 11222221 1123
Q ss_pred eEEEee---CCcEEEE-ecCCeEEEEeCCCCc
Q 045569 304 PLGFWK---KGAFFVH-STNEQLLLYDPNTQE 331 (362)
Q Consensus 304 ~~~~~~---~g~il~~-~~~~~~~~yd~~~~~ 331 (362)
.+.+.. ++..++. ..++.+..||.++++
T Consensus 214 ~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~ 245 (357)
T 3i2n_A 214 SLEFDRKDISMNKLVATSLEGKFHVFDMRTQH 245 (357)
T ss_dssp EEEESCSSSSCCEEEEEESTTEEEEEEEEEEE
T ss_pred EEEcCCCCCCCCEEEEECCCCeEEEEeCcCCC
Confidence 344444 5555444 447788899987643
No 209
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=31.25 E-value=2.2e+02 Score=23.39 Aligned_cols=109 Identities=12% Similarity=0.060 Sum_probs=56.0
Q ss_pred Cce-EEEEeeccCCCccEEEEEEcCCceee-eecCCCCC--CCCCcEEEE-ECCe-EEEEEEc-----C----CCCeEEE
Q 045569 217 DGV-CYWLSEFRDNDHKVILSFHLGNEVFE-EIQEPYIP--ESTPTILGI-YNHS-LCLLLSH-----N----IENYYDI 281 (362)
Q Consensus 217 ~G~-lywl~~~~~~~~~~il~fD~~~e~~~-~i~~P~~~--~~~~~~l~~-~~g~-L~l~~~~-----~----~~~~~~I 281 (362)
+|. +|..... ...|..+|+.+.+.. .++.+... ......+.. -+|+ |++.... . ....+.+
T Consensus 44 dg~~l~v~~~~----~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v 119 (337)
T 1pby_B 44 GGRIAYATVNK----SESLVKIDLVTGETLGRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVAL 119 (337)
T ss_dssp TSSEEEEEETT----TTEEEEEETTTCCEEEEEECCBTTEEEECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEE
T ss_pred CCCEEEEEeCC----CCeEEEEECCCCCeEeeEEcCCcccccccccceEECCCCCEEEEEecccccccccccccCceEEE
Confidence 564 4444332 347999999876653 45554310 000112332 2454 5444311 0 2367777
Q ss_pred EEeeCCeeEEEEEeCCCCCceeeEEEeeCCcEEEEecCCeEEEEeCCCCcEE
Q 045569 282 WVMKYKCWIKQLSLGPLNGVRTPLGFWKKGAFFVHSTNEQLLLYDPNTQEMR 333 (362)
Q Consensus 282 W~l~~~~W~~~~~i~~~~~~~~~~~~~~~g~il~~~~~~~~~~yd~~~~~~~ 333 (362)
|-++...... .+.... ....+.+..+|+.++.. ++.+..||+++++..
T Consensus 120 ~d~~~~~~~~--~~~~~~-~~~~~~~s~dg~~l~~~-~~~i~~~d~~~~~~~ 167 (337)
T 1pby_B 120 YDAETLSRRK--AFEAPR-QITMLAWARDGSKLYGL-GRDLHVMDPEAGTLV 167 (337)
T ss_dssp EETTTTEEEE--EEECCS-SCCCEEECTTSSCEEEE-SSSEEEEETTTTEEE
T ss_pred EECCCCcEEE--EEeCCC-CcceeEECCCCCEEEEe-CCeEEEEECCCCcEe
Confidence 7776543333 232211 12334455667644443 578999999988764
No 210
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=31.12 E-value=2.2e+02 Score=23.38 Aligned_cols=101 Identities=9% Similarity=0.015 Sum_probs=52.2
Q ss_pred ccEEEEEEcCCcee-eeecCCCCCCCCCcEEEE-ECCeEEEEEEcCCCCeEEEEEeeCCeeEEEEEeCCCC---CceeeE
Q 045569 231 HKVILSFHLGNEVF-EEIQEPYIPESTPTILGI-YNHSLCLLLSHNIENYYDIWVMKYKCWIKQLSLGPLN---GVRTPL 305 (362)
Q Consensus 231 ~~~il~fD~~~e~~-~~i~~P~~~~~~~~~l~~-~~g~L~l~~~~~~~~~~~IW~l~~~~W~~~~~i~~~~---~~~~~~ 305 (362)
...|..+|+.+.+. ..+.++..... ...+.. -+|+..++... ....+.+|-++...-.......... .....+
T Consensus 10 ~~~v~~~d~~~~~~~~~~~~~~~~~~-~~~~~~s~dg~~l~v~~~-~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (337)
T 1pby_B 10 PDKLVVIDTEKMAVDKVITIADAGPT-PMVPMVAPGGRIAYATVN-KSESLVKIDLVTGETLGRIDLSTPEERVKSLFGA 87 (337)
T ss_dssp TTEEEEEETTTTEEEEEEECTTCTTC-CCCEEECTTSSEEEEEET-TTTEEEEEETTTCCEEEEEECCBTTEEEECTTCE
T ss_pred CCeEEEEECCCCcEEEEEEcCCCCCC-ccceEEcCCCCEEEEEeC-CCCeEEEEECCCCCeEeeEEcCCcccccccccce
Confidence 34788899987655 34566542100 012332 35644333332 3567888877653322222222100 012234
Q ss_pred EEeeCCcEEEEe-------------cCCeEEEEeCCCCcEE
Q 045569 306 GFWKKGAFFVHS-------------TNEQLLLYDPNTQEMR 333 (362)
Q Consensus 306 ~~~~~g~il~~~-------------~~~~~~~yd~~~~~~~ 333 (362)
.+..+|+.++.. .++.+..||+++++..
T Consensus 88 ~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~ 128 (337)
T 1pby_B 88 ALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRR 128 (337)
T ss_dssp EECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEE
T ss_pred EECCCCCEEEEEecccccccccccccCceEEEEECCCCcEE
Confidence 555667544433 3578999999987654
No 211
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=30.72 E-value=2.5e+02 Score=23.82 Aligned_cols=118 Identities=14% Similarity=0.085 Sum_probs=61.4
Q ss_pred EeeeeeeeEEEee--cCceEEEEeCCCcccccCCCCCcCCCCcccceeeeeeeeecCCCCCeEEEEEEEEeecccccccC
Q 045569 103 LVGPYNGIFCIFG--NNNRITLWNRATKESRVLPKCTTVFPKYTSIFCKCTGFGLDPMSTDYKLVLIFTLWNEKLDLLYE 180 (362)
Q Consensus 103 ~~~s~~GLl~~~~--~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~ 180 (362)
.+...+|.|.+.. ...+++..++-......+-... . ....|+++|+..+. +...- . .
T Consensus 128 avdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~---l------~~Pnglavd~~~~~--lY~aD--~--------~ 186 (318)
T 3sov_A 128 ALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIIINSE---I------YWPNGLTLDYEEQK--LYWAD--A--------K 186 (318)
T ss_dssp EEEGGGTEEEEEECSSSCEEEEEETTSCSCEEEECSS---C------SCEEEEEEETTTTE--EEEEE--T--------T
T ss_pred EEeCCCCEEEEEecCCCCEEEEEEcCCCCeEEEEECC---C------CCccEEEEeccCCE--EEEEE--C--------C
Confidence 3445567777764 2456888877643332221111 1 11568888876543 22221 0 1
Q ss_pred cceEEEEECCCCCceecccCCCccccccCCcceEEECceEEEEeeccCCCccEEEEEEcCCcee-eeecCC
Q 045569 181 FSHVAVYSLSTNSWRYCDCFKSNHYYMDGAFDSVYLDGVCYWLSEFRDNDHKVILSFHLGNEVF-EEIQEP 250 (362)
Q Consensus 181 ~~~~eVyss~~~~W~~~~~~~~~~~~~~~~~~~v~~~G~lywl~~~~~~~~~~il~fD~~~e~~-~~i~~P 250 (362)
...+++++.....=+.+.......| ..-...++.+||.... ...|.++|..+.+. +.+..|
T Consensus 187 ~~~I~~~d~dG~~~~~~~~~~~~~P-----~glav~~~~lywtd~~----~~~V~~~~~~~G~~~~~i~~~ 248 (318)
T 3sov_A 187 LNFIHKSNLDGTNRQAVVKGSLPHP-----FALTLFEDILYWTDWS----THSILACNKYTGEGLREIHSD 248 (318)
T ss_dssp TTEEEEEETTSCSCEEEECSCCSCE-----EEEEEETTEEEEEETT----TTEEEEEETTTCCSCEEEECC
T ss_pred CCEEEEEcCCCCceEEEecCCCCCc-----eEEEEeCCEEEEEecC----CCeEEEEECCCCCceEEEeCC
Confidence 2357777776433333221111122 1223457899999654 35899999965543 444443
No 212
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=30.59 E-value=2.4e+02 Score=24.58 Aligned_cols=66 Identities=11% Similarity=0.054 Sum_probs=39.0
Q ss_pred CCeEEEEEEcCCCCeEEEEEeeCCeeEEEEEeCC--CCCceeeEEEeeCCcEEEEe-cCCeEEEEeCCCCcEE
Q 045569 264 NHSLCLLLSHNIENYYDIWVMKYKCWIKQLSLGP--LNGVRTPLGFWKKGAFFVHS-TNEQLLLYDPNTQEMR 333 (362)
Q Consensus 264 ~g~L~l~~~~~~~~~~~IW~l~~~~W~~~~~i~~--~~~~~~~~~~~~~g~il~~~-~~~~~~~yd~~~~~~~ 333 (362)
+|.+.+++. ....+.+|-++...- ...+.. .......+.+..++..++.. .++.+..||+++++..
T Consensus 181 ~~~~l~~~~--~d~~i~iwd~~~~~~--~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~ 249 (437)
T 3gre_A 181 EKSLLVALT--NLSRVIIFDIRTLER--LQIIENSPRHGAVSSICIDEECCVLILGTTRGIIDIWDIRFNVLI 249 (437)
T ss_dssp SCEEEEEEE--TTSEEEEEETTTCCE--EEEEECCGGGCCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEE
T ss_pred CCCEEEEEe--CCCeEEEEeCCCCee--eEEEccCCCCCceEEEEECCCCCEEEEEcCCCeEEEEEcCCccEE
Confidence 455555555 467899999877322 222322 11222344555567766654 4777999999887653
No 213
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=30.57 E-value=2.8e+02 Score=24.42 Aligned_cols=206 Identities=9% Similarity=-0.035 Sum_probs=0.0
Q ss_pred eEeeeeeeeEEEeecCceEEEEeCCCcc----------------------------------------------------
Q 045569 102 ELVGPYNGIFCIFGNNNRITLWNRATKE---------------------------------------------------- 129 (362)
Q Consensus 102 ~~~~s~~GLl~~~~~~~~~~V~NP~T~~---------------------------------------------------- 129 (362)
.+.-+.+|-+++....+.+.|||..|++
T Consensus 9 ~v~~s~dg~~l~~~~~~~i~v~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (450)
T 2vdu_B 9 NLLTSRDGSLVFAIIKNCILSFKYQSPNHWEFAGKWSDDFDKIQESRNTTAKEQQGQSSENENENKKLKSNKGDSIKRTA 88 (450)
T ss_dssp EEEECSSSSEEEEEETTEEEEEEEETTTEEEEEEEEECCC----------------------------------------
T ss_pred EEEecCCCCEEEEEeCCeEEEEECCCCCcceeeeecCCccccccccccccchhhccccccccccccccccCcCccccccC
Q ss_pred -cccCCCCCcCCCCcccceeeeeeeeecCCCCCeEEEEEEEEeecccccccCcceEEEEECC--CCCceecccCCCcccc
Q 045569 130 -SRVLPKCTTVFPKYTSIFCKCTGFGLDPMSTDYKLVLIFTLWNEKLDLLYEFSHVAVYSLS--TNSWRYCDCFKSNHYY 206 (362)
Q Consensus 130 -~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~eVyss~--~~~W~~~~~~~~~~~~ 206 (362)
-...|....+..... ..++.++|..+..-+..-. ...+.||+.. ++.-...-.....-..
T Consensus 89 ~~~~~~~~~~~~~~~~-----v~~~~~s~d~~~l~~~~~~------------dg~v~iwd~~~~~~~~~~~~~~~~~~~~ 151 (450)
T 2vdu_B 89 AKVPSPGLGAPPIYSY-----IRNLRLTSDESRLIACADS------------DKSLLVFDVDKTSKNVLKLRKRFCFSKR 151 (450)
T ss_dssp -----------CCCCC-----EEEEEECTTSSEEEEEEGG------------GTEEEEEEECSSSSSCEEEEEEEECSSC
T ss_pred ccccCCCCCCCccCCc-----eEEEEEcCCCCEEEEEECC------------CCeEEEEECcCCCCceeeeeecccCCCC
Q ss_pred ccCCcceEEE--CceEEEEeeccCCCccEEEEEEcCCceee--eecCCCCCCCCC-cEEEEEC---CeEEEEEEcCCCCe
Q 045569 207 MDGAFDSVYL--DGVCYWLSEFRDNDHKVILSFHLGNEVFE--EIQEPYIPESTP-TILGIYN---HSLCLLLSHNIENY 278 (362)
Q Consensus 207 ~~~~~~~v~~--~G~lywl~~~~~~~~~~il~fD~~~e~~~--~i~~P~~~~~~~-~~l~~~~---g~L~l~~~~~~~~~ 278 (362)
..++.+ +|..-....... .|..+|+.+.... .+.......... .....-+ |++.+.+. ....
T Consensus 152 ----v~~~~~sp~~~~l~~~~~~g----~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~--~d~~ 221 (450)
T 2vdu_B 152 ----PNAISIAEDDTTVIIADKFG----DVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSD--RDEH 221 (450)
T ss_dssp ----EEEEEECTTSSEEEEEETTS----EEEEEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEE--TTSC
T ss_pred ----ceEEEEcCCCCEEEEEeCCC----cEEEEecCCcccccccceeeecccCceEEEEEcCCCCCCcEEEEEc--CCCc
Q ss_pred EEEEEeeCCeeEEEEEeCCCCCceeeEEEeeCCcEEEEecCCeEEEEeCCCCcEEEe
Q 045569 279 YDIWVMKYKCWIKQLSLGPLNGVRTPLGFWKKGAFFVHSTNEQLLLYDPNTQEMRDL 335 (362)
Q Consensus 279 ~~IW~l~~~~W~~~~~i~~~~~~~~~~~~~~~g~il~~~~~~~~~~yd~~~~~~~~v 335 (362)
+.||-++...-...........+...... ....++....++.+.+||+++++....
T Consensus 222 i~vwd~~~~~~~~~~~~~h~~~v~~~~~s-d~~~l~s~~~d~~v~vwd~~~~~~~~~ 277 (450)
T 2vdu_B 222 IKISHYPQCFIVDKWLFGHKHFVSSICCG-KDYLLLSAGGDDKIFAWDWKTGKNLST 277 (450)
T ss_dssp EEEEEESCTTCEEEECCCCSSCEEEEEEC-STTEEEEEESSSEEEEEETTTCCEEEE
T ss_pred EEEEECCCCceeeeeecCCCCceEEEEEC-CCCEEEEEeCCCeEEEEECCCCcEeee
No 214
>2lh0_A Histone chaperone RTT106; chromosomal protein, nucleus, phosphoprotein, transcription, transcription regulation, transposition; NMR {Saccharomyces cerevisiae}
Probab=29.90 E-value=27 Score=22.47 Aligned_cols=33 Identities=21% Similarity=0.070 Sum_probs=20.9
Q ss_pred CCCc-CCCcchHHHHHHHHccCC--ccccccccccc
Q 045569 1 MMMT-GDEHFLEETIIEILSKLP--VKSLLRFRCIC 33 (362)
Q Consensus 1 ~m~~-~~~~LP~Dll~eIL~rLP--~ksl~r~r~Vc 33 (362)
||.. -++.||.||-..|++-+- +.++--|.-|+
T Consensus 3 ~M~~~wL~~LP~~Lq~kV~aIV~~~PsSl~VF~~Ly 38 (70)
T 2lh0_A 3 MMSKLFLDELPESLSRKIGTVVRVLPSSLEIFEELY 38 (70)
T ss_dssp CSSCCGGGGSCHHHHHHHHHHHTTCTTHHHHHHHHH
T ss_pred cchHHHHHhCCHHHHHHHHHHHHhCccHHHHHHHHH
Confidence 6776 388999999987755332 34444444443
No 215
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=29.52 E-value=2.7e+02 Score=23.85 Aligned_cols=101 Identities=9% Similarity=-0.035 Sum_probs=50.9
Q ss_pred EEEEEEcCCceeeeecCCCCCCCCCcEEE-EECCeEEEEEEcCCCC--eEEEEEeeCCeeEE--EEEeCCCCCceeeEEE
Q 045569 233 VILSFHLGNEVFEEIQEPYIPESTPTILG-IYNHSLCLLLSHNIEN--YYDIWVMKYKCWIK--QLSLGPLNGVRTPLGF 307 (362)
Q Consensus 233 ~il~fD~~~e~~~~i~~P~~~~~~~~~l~-~~~g~L~l~~~~~~~~--~~~IW~l~~~~W~~--~~~i~~~~~~~~~~~~ 307 (362)
.+..++..+..................+. .-+|...+........ .+.+|.++...... ...+.....-...+++
T Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~ 277 (365)
T 4h5i_A 198 SLEVISTVTGSCIARKTDFDKNWSLSKINFIADDTVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDV 277 (365)
T ss_dssp CEEEEETTTCCEEEEECCCCTTEEEEEEEEEETTEEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEE
T ss_pred eEEEEEeccCcceeeeecCCCCCCEEEEEEcCCCCEEEEEecCCcceeEEeecccccceecceeeeeecCCCCCeEeEEE
Confidence 46666766554433222111111102222 3467766555543333 45666665533322 2333322122234556
Q ss_pred eeCCcEEEEe-cCCeEEEEeCCCCcEE
Q 045569 308 WKKGAFFVHS-TNEQLLLYDPNTQEMR 333 (362)
Q Consensus 308 ~~~g~il~~~-~~~~~~~yd~~~~~~~ 333 (362)
..+|+++... .++.+.+||.++++..
T Consensus 278 Spdg~~lasgs~D~~V~iwd~~~~~~~ 304 (365)
T 4h5i_A 278 DMKGELAVLASNDNSIALVKLKDLSMS 304 (365)
T ss_dssp CTTSCEEEEEETTSCEEEEETTTTEEE
T ss_pred CCCCCceEEEcCCCEEEEEECCCCcEE
Confidence 6788877654 4778999999987643
No 216
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=29.26 E-value=2.6e+02 Score=23.53 Aligned_cols=68 Identities=19% Similarity=0.247 Sum_probs=39.6
Q ss_pred CCeEEEEEEcCCCCeEEEEEeeCCe----e-EEEEEeCCCCCceeeEEEeeCCcEEEEec-CCeEEEEeCCCCcEE
Q 045569 264 NHSLCLLLSHNIENYYDIWVMKYKC----W-IKQLSLGPLNGVRTPLGFWKKGAFFVHST-NEQLLLYDPNTQEMR 333 (362)
Q Consensus 264 ~g~L~l~~~~~~~~~~~IW~l~~~~----W-~~~~~i~~~~~~~~~~~~~~~g~il~~~~-~~~~~~yd~~~~~~~ 333 (362)
+|.+.+.+. ....+.||.+.... . .....+.........+.+..++.+++... ++.+..||+++++..
T Consensus 38 d~~~l~sgs--~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~~~~~l~s~s~D~~v~lwd~~~~~~~ 111 (343)
T 2xzm_R 38 DSPVLISGS--RDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQENCFAISSSWDKTLRLWDLRTGTTY 111 (343)
T ss_dssp CCCEEEEEE--TTSCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECSSTTEEEEEETTSEEEEEETTSSCEE
T ss_pred CCCEEEEEc--CCCEEEEEECCcCCcccccccccchhccCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCcEE
Confidence 455555555 45789999987511 1 12223332222223445556777766544 788999999987643
No 217
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=29.01 E-value=4.6e+02 Score=26.44 Aligned_cols=34 Identities=9% Similarity=0.044 Sum_probs=23.7
Q ss_pred eEEEeeCCcEEEEecCCeEEEEeCCCCc--EEEeeE
Q 045569 304 PLGFWKKGAFFVHSTNEQLLLYDPNTQE--MRDLGR 337 (362)
Q Consensus 304 ~~~~~~~g~il~~~~~~~~~~yd~~~~~--~~~v~~ 337 (362)
.+.+..+|+.++....+.+..+|.++++ ...+.+
T Consensus 612 ~~~~S~DG~~l~~~~~~~i~~~d~~~~~~~~~~~~~ 647 (1045)
T 1k32_A 612 DLRLSADRKTVMVRKDDGKIYTFPLEKPEDERTVET 647 (1045)
T ss_dssp EEEECTTSCEEEEEETTSCEEEEESSCTTSCEECCC
T ss_pred eEEECCCCCEEEEEcCCcEEEEeCccCcccCCcccc
Confidence 4456678876666666689999998887 444444
No 218
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=28.95 E-value=2.6e+02 Score=23.49 Aligned_cols=95 Identities=8% Similarity=0.018 Sum_probs=52.5
Q ss_pred cEEEEEEcCCceee-eecCCCCCCCCCcEEEE-ECCeEEEEEEcCCCCeEEEEEeeCCeeEEEEEeCCCCC--ceeeEEE
Q 045569 232 KVILSFHLGNEVFE-EIQEPYIPESTPTILGI-YNHSLCLLLSHNIENYYDIWVMKYKCWIKQLSLGPLNG--VRTPLGF 307 (362)
Q Consensus 232 ~~il~fD~~~e~~~-~i~~P~~~~~~~~~l~~-~~g~L~l~~~~~~~~~~~IW~l~~~~W~~~~~i~~~~~--~~~~~~~ 307 (362)
..|..+|+.+.... .+..... ....+.. -+|.+.+.+. ....+.||-++... ....+..... -...+.+
T Consensus 206 ~~v~~wd~~~~~~~~~~~~h~~---~v~~v~~~p~~~~l~s~s--~d~~v~iwd~~~~~--~~~~~~~~~~~~~v~~~~~ 278 (340)
T 1got_B 206 ASAKLWDVREGMCRQTFTGHES---DINAICFFPNGNAFATGS--DDATCRLFDLRADQ--ELMTYSHDNIICGITSVSF 278 (340)
T ss_dssp SCEEEEETTTCSEEEEECCCSS---CEEEEEECTTSSEEEEEE--TTSCEEEEETTTTE--EEEEECCTTCCSCEEEEEE
T ss_pred CcEEEEECCCCeeEEEEcCCcC---CEEEEEEcCCCCEEEEEc--CCCcEEEEECCCCc--EEEEEccCCcccceEEEEE
Confidence 36788888765432 2221111 0022332 2566655555 46789999987632 2222332211 1234556
Q ss_pred eeCCcEEEEec-CCeEEEEeCCCCcEE
Q 045569 308 WKKGAFFVHST-NEQLLLYDPNTQEMR 333 (362)
Q Consensus 308 ~~~g~il~~~~-~~~~~~yd~~~~~~~ 333 (362)
..+|.+++... ++.+.+||..+++..
T Consensus 279 s~~g~~l~~g~~d~~i~vwd~~~~~~~ 305 (340)
T 1got_B 279 SKSGRLLLAGYDDFNCNVWDALKADRA 305 (340)
T ss_dssp CTTSSEEEEEETTSEEEEEETTTCCEE
T ss_pred CCCCCEEEEECCCCeEEEEEcccCcEe
Confidence 66787776654 778999999876643
No 219
>2dk7_A Transcription elongation regulator 1; structural genomics, WW domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=28.26 E-value=52 Score=21.38 Aligned_cols=19 Identities=26% Similarity=0.599 Sum_probs=14.9
Q ss_pred EEEecCCeEEEEeCCCCcE
Q 045569 314 FVHSTNEQLLLYDPNTQEM 332 (362)
Q Consensus 314 l~~~~~~~~~~yd~~~~~~ 332 (362)
.....++++++||..|++-
T Consensus 24 ~v~T~dGR~fyyN~~Tk~S 42 (73)
T 2dk7_A 24 VVWTGDERVFFYNPTTRLS 42 (73)
T ss_dssp EEEESSSCEEEEETTTTEE
T ss_pred EEECCCCCEEEecCcccce
Confidence 3445689999999999864
No 220
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=28.00 E-value=4e+02 Score=25.32 Aligned_cols=196 Identities=10% Similarity=0.013 Sum_probs=0.0
Q ss_pred eEEEEeCCC-cccccCCCCCcCCCCcccceeeeeeeeecCCCCCeEEEEEEEEeecccccccCcceEEEEECCCCCceec
Q 045569 119 RITLWNRAT-KESRVLPKCTTVFPKYTSIFCKCTGFGLDPMSTDYKLVLIFTLWNEKLDLLYEFSHVAVYSLSTNSWRYC 197 (362)
Q Consensus 119 ~~~V~NP~T-~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~eVyss~~~~W~~~ 197 (362)
.++++|..+ ++...+......... ...+.+ ..+++-++......... ..+.+++..++..+.+
T Consensus 264 ~l~~~d~~~~~~~~~~~~~~~~~~~-------~~~~~~--pDg~~l~~~~~~~~~~~-------~~i~~~d~~~g~~~~~ 327 (741)
T 2ecf_A 264 KLGVISPAEQAQTQWIDLGKEQDIY-------LARVNW--RDPQHLSFQRQSRDQKK-------LDLVEVTLASNQQRVL 327 (741)
T ss_dssp EEEEECSSTTCCCEEECCCSCSSEE-------EEEEEE--EETTEEEEEEEETTSSE-------EEEEEEETTTCCEEEE
T ss_pred EEEEEECCCCCceEEecCCCCcceE-------EEEEEe--CCCCEEEEEEecccCCe-------EEEEEEECCCCceEEE
Q ss_pred ccCCCccccccCCcceEEECceEEEEeeccCCCccEEEEEEcCCceeeeecCCCCCCCCCcEEEEECCeEEEEEEcCCCC
Q 045569 198 DCFKSNHYYMDGAFDSVYLDGVCYWLSEFRDNDHKVILSFHLGNEVFEEIQEPYIPESTPTILGIYNHSLCLLLSHNIEN 277 (362)
Q Consensus 198 ~~~~~~~~~~~~~~~~v~~~G~lywl~~~~~~~~~~il~fD~~~e~~~~i~~P~~~~~~~~~l~~~~g~L~l~~~~~~~~ 277 (362)
..................-+|.+++...... ...|..+|+.+. ...+.-.............-++.|++........
T Consensus 328 ~~~~~~~~~~~~~~~~~spdg~~~~~~~~~g--~~~l~~~~~~~~-~~~l~~~~~~v~~~~~~s~dg~~l~~~~~~~~~~ 404 (741)
T 2ecf_A 328 AHETSPTWVPLHNSLRFLDDGSILWSSERTG--FQHLYRIDSKGK-AAALTHGNWSVDELLAVDEKAGLAYFRAGIESAR 404 (741)
T ss_dssp EEEECSSCCCCCSCCEECTTSCEEEEECTTS--SCEEEEECSSSC-EEESCCSSSCEEEEEEEETTTTEEEEEECSSCTT
T ss_pred EEcCCCCcCCcCCceEECCCCeEEEEecCCC--ccEEEEEcCCCC-eeeeeecceEEEeEeEEeCCCCEEEEEEeCCCCc
Q ss_pred eEEEEEeeCCeeEEEEEeCCCCCceeeEEEeeCCcEEEEec-----CCeEEEEeCCCCcEEEe
Q 045569 278 YYDIWVMKYKCWIKQLSLGPLNGVRTPLGFWKKGAFFVHST-----NEQLLLYDPNTQEMRDL 335 (362)
Q Consensus 278 ~~~IW~l~~~~W~~~~~i~~~~~~~~~~~~~~~g~il~~~~-----~~~~~~yd~~~~~~~~v 335 (362)
.+.||.++... .....+.. ..-...+.+..+|+.++... ...++.+|.+++..+.+
T Consensus 405 ~~~l~~~~~~g-~~~~~l~~-~~~~~~~~~spdg~~l~~~~~~~~~p~~~~l~~~~~~~~~~l 465 (741)
T 2ecf_A 405 ESQIYAVPLQG-GQPQRLSK-APGMHSASFARNASVYVDSWSNNSTPPQIELFRANGEKIATL 465 (741)
T ss_dssp CBEEEEEETTC-CCCEECCC-SCSEEEEEECTTSSEEEEEEEETTEEEEEEEEETTSCEEECS
T ss_pred eEEEEEEEcCC-CCeeeccc-CCCceEEEECCCCCEEEEEecCCCCCCeEEEEEcCCCeEEEe
No 221
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=27.77 E-value=3.1e+02 Score=23.94 Aligned_cols=205 Identities=9% Similarity=0.011 Sum_probs=0.0
Q ss_pred eeeEEEee-------------cCceEEEEeCC--CcccccCCCCCc-CCCCcccceeeeeeeeecCC-CCCeEEEEEEEE
Q 045569 108 NGIFCIFG-------------NNNRITLWNRA--TKESRVLPKCTT-VFPKYTSIFCKCTGFGLDPM-STDYKLVLIFTL 170 (362)
Q Consensus 108 ~GLl~~~~-------------~~~~~~V~NP~--T~~~~~LP~~~~-~~~~~~~~~~~~~~~g~d~~-~~~ykVv~~~~~ 170 (362)
+|++.+.+ ...++++++|. +.+..+|..... ..... ....|+.+.+. .+..+++.+...
T Consensus 60 ~G~~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~----f~PhGi~~~~d~dg~~~L~Vvnh~ 135 (355)
T 3sre_A 60 NGLAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAVSELEIIGNTLDISS----FNPHGISTFIDDDNTVYLLVVNHP 135 (355)
T ss_dssp TSEEEEEECCC-----------CCEEEEEETTSSSCCEEECEEECSSCCGGG----CCEEEEEEEECTTCCEEEEEEECS
T ss_pred CCeEEEEeccccCCCcccCCCCCCeEEEEecCCCCCceEEEEccCCCCCcCc----eeeeeeEEEECCCCcEEEEEEECC
Q ss_pred eecccccccCcceEEEEECCCCCce-----ecccCCCccccccCCcceEEECceEEEEeeccCCC-------------cc
Q 045569 171 WNEKLDLLYEFSHVAVYSLSTNSWR-----YCDCFKSNHYYMDGAFDSVYLDGVCYWLSEFRDND-------------HK 232 (362)
Q Consensus 171 ~~~~~~~~~~~~~~eVyss~~~~W~-----~~~~~~~~~~~~~~~~~~v~~~G~lywl~~~~~~~-------------~~ 232 (362)
.... .+|+|....+.-. .++..+...+. .-.+.-+|.+|.-....... ..
T Consensus 136 ~~~s--------~ielf~~d~~~~~~~~~~~~~g~~~~~pN----D~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g 203 (355)
T 3sre_A 136 GSSS--------TVEVFKFQEEEKSLLHLKTIRHKLLPSVN----DIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWS 203 (355)
T ss_dssp TTCC--------EEEEEEEETTTTEEEEEEEECCTTCSSEE----EEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCE
T ss_pred CCCC--------eEEEEEEECCCCEEEEEeccccCCCCCCc----eEEEeCCCCEEecCCcEeCCcccccchhhccCCcc
Q ss_pred EEEEEEcCCcee--eeecCCCCCCCCCcEEEEECCeEEEEEEcCCCCeEEEEEeeC-CeeEEEEEeCCCCCceeeEEEee
Q 045569 233 VILSFHLGNEVF--EEIQEPYIPESTPTILGIYNHSLCLLLSHNIENYYDIWVMKY-KCWIKQLSLGPLNGVRTPLGFWK 309 (362)
Q Consensus 233 ~il~fD~~~e~~--~~i~~P~~~~~~~~~l~~~~g~L~l~~~~~~~~~~~IW~l~~-~~W~~~~~i~~~~~~~~~~~~~~ 309 (362)
.+..+|..+-+- ..+..|.. ..+.--+..|+++.. ....+..+.++. ++......+ .......-+++..
T Consensus 204 ~vyr~d~~~~~~~~~~l~~pNG-----ia~spDg~~lYvadt--~~~~I~~~~~~~~g~l~~~~~~-~~~g~PDGi~vD~ 275 (355)
T 3sre_A 204 FVTYYSPNDVRVVAEGFDFANG-----INISPDGKYVYIAEL--LAHKIHVYEKHANWTLTPLRVL-SFDTLVDNISVDP 275 (355)
T ss_dssp EEEEECTTCCEEEEEEESSEEE-----EEECTTSSEEEEEEG--GGTEEEEEEECTTSCEEEEEEE-ECSSEEEEEEECT
T ss_pred EEEEEECCeEEEeecCCcccCc-----ceECCCCCEEEEEeC--CCCeEEEEEECCCCcEecCEEE-eCCCCCceEEEeC
Q ss_pred -CCcEEE-Ee-cCCeEEEEeCC---CCcEEEee
Q 045569 310 -KGAFFV-HS-TNEQLLLYDPN---TQEMRDLG 336 (362)
Q Consensus 310 -~g~il~-~~-~~~~~~~yd~~---~~~~~~v~ 336 (362)
+|.+++ .. ...+++.||++ ...+-+|.
T Consensus 276 e~G~lwva~~~~g~~v~~~~P~~~~~s~v~rI~ 308 (355)
T 3sre_A 276 VTGDLWVGCHPNGMRIFFYDAENPPGSEVLRIQ 308 (355)
T ss_dssp TTCCEEEEEESCHHHHHSCCTTSCCCEEEEEEE
T ss_pred CCCcEEEEecCCceEEEEECCCCCCCCEEEEEE
No 222
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=27.46 E-value=2.6e+02 Score=23.02 Aligned_cols=19 Identities=11% Similarity=0.177 Sum_probs=12.0
Q ss_pred eeeEEEeecCceEEEEeCC
Q 045569 108 NGIFCIFGNNNRITLWNRA 126 (362)
Q Consensus 108 ~GLl~~~~~~~~~~V~NP~ 126 (362)
+|.|.+......++.+|+.
T Consensus 107 ~~~l~v~t~~~~l~~~d~~ 125 (330)
T 3hxj_A 107 EDILYVTSMDGHLYAINTD 125 (330)
T ss_dssp TTEEEEECTTSEEEEECTT
T ss_pred CCEEEEEecCCEEEEEcCC
Confidence 6666666544457777776
No 223
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=27.36 E-value=2.8e+02 Score=23.40 Aligned_cols=138 Identities=7% Similarity=-0.015 Sum_probs=67.7
Q ss_pred eEEEEECCC--CCceecccCCCccccccCCcceEEE--CceEEEEeeccCCCccEEEEEEcCCceeeeecCCCCCCCCC-
Q 045569 183 HVAVYSLST--NSWRYCDCFKSNHYYMDGAFDSVYL--DGVCYWLSEFRDNDHKVILSFHLGNEVFEEIQEPYIPESTP- 257 (362)
Q Consensus 183 ~~eVyss~~--~~W~~~~~~~~~~~~~~~~~~~v~~--~G~lywl~~~~~~~~~~il~fD~~~e~~~~i~~P~~~~~~~- 257 (362)
...||-+.. .+|+.+..... .. ..+|.. ++.+|. .... ..|+.-+=..++|+.+..+.......
T Consensus 14 ~~~~~~s~d~g~~W~~~~~~~~-~~-----~~~v~~~~~~~~~~-~G~~----g~i~~s~DgG~tW~~~~~~~~~~~~~~ 82 (327)
T 2xbg_A 14 PRGSAIPALDYNPWEAIQLPTT-AT-----ILDMSFIDRHHGWL-VGVN----ATLMETRDGGQTWEPRTLVLDHSDYRF 82 (327)
T ss_dssp ----CCCBCSSCCEEEEECSCS-SC-----EEEEEESSSSCEEE-EETT----TEEEEESSTTSSCEECCCCCSCCCCEE
T ss_pred ccceeecCCCCCCceEeecCCC-Cc-----EEEEEECCCCcEEE-EcCC----CeEEEeCCCCCCCeECCCCCCCCCccE
Confidence 456666654 58998764221 11 233443 234444 3222 24544433456899886654221211
Q ss_pred cEEEEECCeEEEEEEcCCCCeEEEEEeeC--CeeEEEEEeCCCCCceeeEEEeeCCcEEEEecCCeEEEEeCCCCcEEEe
Q 045569 258 TILGIYNHSLCLLLSHNIENYYDIWVMKY--KCWIKQLSLGPLNGVRTPLGFWKKGAFFVHSTNEQLLLYDPNTQEMRDL 335 (362)
Q Consensus 258 ~~l~~~~g~L~l~~~~~~~~~~~IW~l~~--~~W~~~~~i~~~~~~~~~~~~~~~g~il~~~~~~~~~~yd~~~~~~~~v 335 (362)
..+....+.+.++... . .|+.-+| ..|.+.......+.....+....++.+++....+.++.-+-..++|+.+
T Consensus 83 ~~i~~~~~~~~~~g~~--g---~i~~S~DgG~tW~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~g~v~~S~DgG~tW~~~ 157 (327)
T 2xbg_A 83 NSVSFQGNEGWIVGEP--P---IMLHTTDGGQSWSQIPLDPKLPGSPRLIKALGNGSAEMITNVGAIYRTKDSGKNWQAL 157 (327)
T ss_dssp EEEEEETTEEEEEEET--T---EEEEESSTTSSCEECCCCTTCSSCEEEEEEEETTEEEEEETTCCEEEESSTTSSEEEE
T ss_pred EEEEecCCeEEEEECC--C---eEEEECCCCCCceECccccCCCCCeEEEEEECCCCEEEEeCCccEEEEcCCCCCCEEe
Confidence 3344446677665532 1 5777776 8899876432111111223334556666655444454444445667766
Q ss_pred e
Q 045569 336 G 336 (362)
Q Consensus 336 ~ 336 (362)
.
T Consensus 158 ~ 158 (327)
T 2xbg_A 158 V 158 (327)
T ss_dssp E
T ss_pred e
Confidence 4
No 224
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=26.58 E-value=2.9e+02 Score=23.35 Aligned_cols=143 Identities=8% Similarity=-0.047 Sum_probs=70.3
Q ss_pred ceEEEEECCCCCceecccCCCccccccCCcceEEE--Cce-EEEEeeccC-CCccEEEEEEcCCceeeeecCCCCCCCCC
Q 045569 182 SHVAVYSLSTNSWRYCDCFKSNHYYMDGAFDSVYL--DGV-CYWLSEFRD-NDHKVILSFHLGNEVFEEIQEPYIPESTP 257 (362)
Q Consensus 182 ~~~eVyss~~~~W~~~~~~~~~~~~~~~~~~~v~~--~G~-lywl~~~~~-~~~~~il~fD~~~e~~~~i~~P~~~~~~~ 257 (362)
..+.+++..++..+.+.... ... ....+. +|. +++...... .....|..+|+.+.+...+..... ....
T Consensus 168 ~~l~~~d~~~g~~~~~~~~~--~~~----~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~-~~~~ 240 (396)
T 3c5m_A 168 CRLIKVDIETGELEVIHQDT--AWL----GHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNVRKIKEHAE-GESC 240 (396)
T ss_dssp EEEEEEETTTCCEEEEEEES--SCE----EEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCCEESSCCCT-TEEE
T ss_pred ceEEEEECCCCcEEeeccCC--ccc----ccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCceeEeeccCC-Cccc
Confidence 46777888877766553211 110 112222 354 666654221 011468889988776655432110 1000
Q ss_pred cEEEE-ECCe-EEEEEEcCCCCe--EEEEEeeCCeeEEEEEeCCCCCceeeEEEee-CCcEEEEe---------------
Q 045569 258 TILGI-YNHS-LCLLLSHNIENY--YDIWVMKYKCWIKQLSLGPLNGVRTPLGFWK-KGAFFVHS--------------- 317 (362)
Q Consensus 258 ~~l~~-~~g~-L~l~~~~~~~~~--~~IW~l~~~~W~~~~~i~~~~~~~~~~~~~~-~g~il~~~--------------- 317 (362)
..+.. -+|+ |+++........ +.+|-++.+....+...+ ... ..+.. +|++++..
T Consensus 241 ~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~---~~~--~~~s~~dg~~l~~~~~~~p~~~~~~~~~~ 315 (396)
T 3c5m_A 241 THEFWIPDGSAMAYVSYFKGQTDRVIYKANPETLENEEVMVMP---PCS--HLMSNFDGSLMVGDGCDAPVDVADADSYN 315 (396)
T ss_dssp EEEEECTTSSCEEEEEEETTTCCEEEEEECTTTCCEEEEEECC---SEE--EEEECSSSSEEEEEECCC----------C
T ss_pred cceEECCCCCEEEEEecCCCCccceEEEEECCCCCeEEeeeCC---CCC--CCccCCCCceEEEecCCcceeeccccccc
Confidence 12222 2555 555544323333 666655444333333322 222 33445 77766542
Q ss_pred --cCCeEEEEeCCCCcEEEee
Q 045569 318 --TNEQLLLYDPNTQEMRDLG 336 (362)
Q Consensus 318 --~~~~~~~yd~~~~~~~~v~ 336 (362)
....++.+|+++++.+.+.
T Consensus 316 ~~~~~~i~~~d~~~~~~~~l~ 336 (396)
T 3c5m_A 316 IENDPFLYVLNTKAKSAQKLC 336 (396)
T ss_dssp CCCCCEEEEEETTTTBCCEEE
T ss_pred cCCCCcEEEEecccCceEEcc
Confidence 2367999999988766543
No 225
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=26.29 E-value=3.7e+02 Score=24.39 Aligned_cols=97 Identities=10% Similarity=0.122 Sum_probs=51.9
Q ss_pred cEEEEEEcCCceeeeecCCCCCCCCCcEEEEE-CCeEEEEEEcCCCCeEEEEEeeCCeeEEEEEeCCCCCceeeEEEeeC
Q 045569 232 KVILSFHLGNEVFEEIQEPYIPESTPTILGIY-NHSLCLLLSHNIENYYDIWVMKYKCWIKQLSLGPLNGVRTPLGFWKK 310 (362)
Q Consensus 232 ~~il~fD~~~e~~~~i~~P~~~~~~~~~l~~~-~g~L~l~~~~~~~~~~~IW~l~~~~W~~~~~i~~~~~~~~~~~~~~~ 310 (362)
..|..+|...+....+...... ...+... +|++.+.+. ....+.+|.++.. ....+.........+++..+
T Consensus 407 ~~v~~~~~~~~~~~~~~~~~~~---v~~~~~s~d~~~l~~~~--~d~~v~~w~~~~~---~~~~~~~~~~~v~~~~~spd 478 (577)
T 2ymu_A 407 KTVKLWNRNGQLLQTLTGHSSS---VWGVAFSPDDQTIASAS--DDKTVKLWNRNGQ---LLQTLTGHSSSVRGVAFSPD 478 (577)
T ss_dssp SEEEEECTTCCEEEEEECCSSC---EEEEEECTTSSEEEEEE--TTSEEEEEETTSC---EEEEEECCSSCEEEEEECTT
T ss_pred CEEEEEeCCCCEEEEecCCCCC---eEEEEECCCCCEEEEEc--CCCEEEEEECCCC---EEEEEcCCCCCEEEEEEcCC
Confidence 3577777665555544332211 0233332 455544444 4578999986542 22233222222344556667
Q ss_pred CcEEEEe-cCCeEEEEeCCCCcEEEee
Q 045569 311 GAFFVHS-TNEQLLLYDPNTQEMRDLG 336 (362)
Q Consensus 311 g~il~~~-~~~~~~~yd~~~~~~~~v~ 336 (362)
++++... .++.+..||...+..+.+.
T Consensus 479 ~~~las~~~d~~i~iw~~~~~~~~~~~ 505 (577)
T 2ymu_A 479 GQTIASASDDKTVKLWNRNGQLLQTLT 505 (577)
T ss_dssp SCEEEEEETTSEEEEEETTSCEEEEEE
T ss_pred CCEEEEEeCCCEEEEEcCCCCEEEEEe
Confidence 7776654 4678999997665555443
No 226
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=25.32 E-value=4.5e+02 Score=25.02 Aligned_cols=138 Identities=11% Similarity=0.040 Sum_probs=70.8
Q ss_pred ceEEEEECCC------C--CceecccCCCccccccCCcceEEEC-ceEEEEeeccCCCccEEEEEEcCCc---eeeeecC
Q 045569 182 SHVAVYSLST------N--SWRYCDCFKSNHYYMDGAFDSVYLD-GVCYWLSEFRDNDHKVILSFHLGNE---VFEEIQE 249 (362)
Q Consensus 182 ~~~eVyss~~------~--~W~~~~~~~~~~~~~~~~~~~v~~~-G~lywl~~~~~~~~~~il~fD~~~e---~~~~i~~ 249 (362)
..+.+++..+ + .++.+....... ...+..+ +.+|+.+... .....|..+|+.+. .|+.+-.
T Consensus 259 ~~l~~~d~~~~~~~~~~~~~~~~l~~~~~~~------~~~~s~dg~~l~~~s~~~-~~~~~l~~~d~~~~~~~~~~~l~~ 331 (710)
T 2xdw_A 259 NRLWYCDLQQESNGITGILKWVKLIDNFEGE------YDYVTNEGTVFTFKTNRH-SPNYRLINIDFTDPEESKWKVLVP 331 (710)
T ss_dssp CEEEEEEGGGSSSSSCSSCCCEEEECSSSSC------EEEEEEETTEEEEEECTT-CTTCEEEEEETTSCCGGGCEEEEC
T ss_pred cEEEEEECcccccccCCccceEEeeCCCCcE------EEEEeccCCEEEEEECCC-CCCCEEEEEeCCCCCcccceeccC
Confidence 4677888765 4 576664322111 1223334 4677776532 23568999999875 4665532
Q ss_pred CCCCCCCCcEEEEE-CCeEEEEEEcCCCCeEEEEEee--CCeeEEEEEeCCCCCceeeEEEeeCC-cEEEEec----CCe
Q 045569 250 PYIPESTPTILGIY-NHSLCLLLSHNIENYYDIWVMK--YKCWIKQLSLGPLNGVRTPLGFWKKG-AFFVHST----NEQ 321 (362)
Q Consensus 250 P~~~~~~~~~l~~~-~g~L~l~~~~~~~~~~~IW~l~--~~~W~~~~~i~~~~~~~~~~~~~~~g-~il~~~~----~~~ 321 (362)
+..... ...+... ++.|.+.... .....||+++ ++. ....+.........+....++ .+++... ...
T Consensus 332 ~~~~~~-~~~~~~~~~~~lv~~~~~--~g~~~l~~~~~~~g~--~~~~l~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~ 406 (710)
T 2xdw_A 332 EHEKDV-LEWVACVRSNFLVLCYLH--DVKNTLQLHDLATGA--LLKIFPLEVGSVVGYSGQKKDTEIFYQFTSFLSPGI 406 (710)
T ss_dssp CCSSCE-EEEEEEETTTEEEEEEEE--TTEEEEEEEETTTCC--EEEEECCCSSEEEEEECCTTCSEEEEEEECSSCCCE
T ss_pred CCCCCe-EEEEEEEcCCEEEEEEEE--CCEEEEEEEECCCCC--EEEecCCCCceEEEEecCCCCCEEEEEEeCCCCCCE
Confidence 221100 0223444 6777766654 3344566554 332 234454322211222222344 4555433 467
Q ss_pred EEEEeCCCCc
Q 045569 322 LLLYDPNTQE 331 (362)
Q Consensus 322 ~~~yd~~~~~ 331 (362)
++.||+++++
T Consensus 407 i~~~d~~tg~ 416 (710)
T 2xdw_A 407 IYHCDLTKEE 416 (710)
T ss_dssp EEEEETTSSS
T ss_pred EEEEECCCCc
Confidence 9999998877
No 227
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=24.33 E-value=3.2e+02 Score=23.05 Aligned_cols=76 Identities=8% Similarity=-0.046 Sum_probs=42.6
Q ss_pred cceEEE--CceEEEEeecc-CCCccEEEEEEcCCce-eeeecCCCCCCC--CC-cEEEEE--CCeEEEEEEcC-CCCeEE
Q 045569 211 FDSVYL--DGVCYWLSEFR-DNDHKVILSFHLGNEV-FEEIQEPYIPES--TP-TILGIY--NHSLCLLLSHN-IENYYD 280 (362)
Q Consensus 211 ~~~v~~--~G~lywl~~~~-~~~~~~il~fD~~~e~-~~~i~~P~~~~~--~~-~~l~~~--~g~L~l~~~~~-~~~~~~ 280 (362)
..++.+ +|.+|++.... ......|+.||+.+.+ ...+.+|..... .. ..++.. +|.+++..... ....+.
T Consensus 69 p~gv~~d~~g~L~v~D~g~~~~~~~~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~ 148 (343)
T 2qe8_A 69 VLGIKSDGNGIVWMLDNGNQSKSVPKLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALI 148 (343)
T ss_dssp EEEEEECSSSEEEEEECHHHHTSCCEEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEE
T ss_pred eeEEEEcCCCcEEEEcCCCCcCCCCeEEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEE
Confidence 445555 48999987541 0002379999999877 566777643211 11 345544 46666654311 235666
Q ss_pred EEEeeC
Q 045569 281 IWVMKY 286 (362)
Q Consensus 281 IW~l~~ 286 (362)
+|-++.
T Consensus 149 v~d~~~ 154 (343)
T 2qe8_A 149 RVDLQT 154 (343)
T ss_dssp EEETTT
T ss_pred EEECCC
Confidence 666654
No 228
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=24.11 E-value=4e+02 Score=24.10 Aligned_cols=96 Identities=10% Similarity=0.129 Sum_probs=52.2
Q ss_pred cEEEEEEcCCceeeeecCCCCCCCCCcEEEE-ECCeEEEEEEcCCCCeEEEEEeeCCeeEEEEEeCCCCCceeeEEEeeC
Q 045569 232 KVILSFHLGNEVFEEIQEPYIPESTPTILGI-YNHSLCLLLSHNIENYYDIWVMKYKCWIKQLSLGPLNGVRTPLGFWKK 310 (362)
Q Consensus 232 ~~il~fD~~~e~~~~i~~P~~~~~~~~~l~~-~~g~L~l~~~~~~~~~~~IW~l~~~~W~~~~~i~~~~~~~~~~~~~~~ 310 (362)
..|..+|...+....+...... ...+.. -+|++.+.+. ....+.||-.+.. ....+.....-...+++..+
T Consensus 448 ~~v~~w~~~~~~~~~~~~~~~~---v~~~~~spd~~~las~~--~d~~i~iw~~~~~---~~~~~~~h~~~v~~l~~s~d 519 (577)
T 2ymu_A 448 KTVKLWNRNGQLLQTLTGHSSS---VRGVAFSPDGQTIASAS--DDKTVKLWNRNGQ---LLQTLTGHSSSVRGVAFSPD 519 (577)
T ss_dssp SEEEEEETTSCEEEEEECCSSC---EEEEEECTTSCEEEEEE--TTSEEEEEETTSC---EEEEEECCSSCEEEEEECTT
T ss_pred CEEEEEECCCCEEEEEcCCCCC---EEEEEEcCCCCEEEEEe--CCCEEEEEcCCCC---EEEEEeCCCCCEEEEEEcCC
Confidence 3677788776655554322111 022332 2566655554 4678999985432 22233322222234556667
Q ss_pred CcEEEEe-cCCeEEEEeCCCCcEEEe
Q 045569 311 GAFFVHS-TNEQLLLYDPNTQEMRDL 335 (362)
Q Consensus 311 g~il~~~-~~~~~~~yd~~~~~~~~v 335 (362)
|++++.. .++.+.+||...+.+..+
T Consensus 520 g~~l~s~~~dg~v~lwd~~~~~~~~~ 545 (577)
T 2ymu_A 520 GQTIASASDDKTVKLWNRNGQLLQTL 545 (577)
T ss_dssp SSCEEEEETTSEEEEECTTSCEEEEE
T ss_pred CCEEEEEECcCEEEEEeCCCCEEEEE
Confidence 7766654 477899999765544443
No 229
>2lyd_A Decapping protein 1; DCP1, XRN1, transcription-protein binding complex; NMR {Drosophila melanogaster}
Probab=24.09 E-value=1.6e+02 Score=21.65 Aligned_cols=28 Identities=7% Similarity=0.153 Sum_probs=21.3
Q ss_pred cEEEEecCCeEEEEeCCCCcEEEeeEee
Q 045569 312 AFFVHSTNEQLLLYDPNTQEMRDLGRKS 339 (362)
Q Consensus 312 ~il~~~~~~~~~~yd~~~~~~~~v~~~~ 339 (362)
+|+.....-.++.||.++++|++.++.|
T Consensus 30 ~Il~~a~~v~vY~f~~~~~~W~K~~iEG 57 (134)
T 2lyd_A 30 EIVDSSSHVAFYTFNSSQNEWEKTDVEG 57 (134)
T ss_dssp EEEEEEEEEEEEEEETTTTEEEEEEEEE
T ss_pred HHHhhCCeEEEEEecCCcCceeEcCCcc
Confidence 4555544556778889999999999887
No 230
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=24.07 E-value=4.7e+02 Score=24.81 Aligned_cols=186 Identities=10% Similarity=0.013 Sum_probs=96.6
Q ss_pred eeeeeEEEee-cCceEEEEeCCCcccccCCCCCcCCCCcccceeeeeeeeecCCCCCeEEEEEEEEeecccccccCcceE
Q 045569 106 PYNGIFCIFG-NNNRITLWNRATKESRVLPKCTTVFPKYTSIFCKCTGFGLDPMSTDYKLVLIFTLWNEKLDLLYEFSHV 184 (362)
Q Consensus 106 s~~GLl~~~~-~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~ 184 (362)
..+|.|...+ ...++..+++-......+-.... . ...|+++|...+. +...- .. ...+
T Consensus 46 ~~~~~lywtD~~~~~I~r~~~~g~~~~~v~~~g~---~------~P~GlAvD~~~~~--LY~tD--~~--------~~~I 104 (628)
T 4a0p_A 46 VTDNRIYWTDISLKTISRAFMNGSALEHVVEFGL---D------YPEGMAVDWLGKN--LYWAD--TG--------TNRI 104 (628)
T ss_dssp TTTTEEEEEETTTTEEEEEETTSCSCEEEECSSC---S------CCCEEEEETTTTE--EEEEE--TT--------TTEE
T ss_pred CCCCEEEEEECCCCeEEEEECCCCCcEEEEeCCC---C------CcceEEEEeCCCE--EEEEE--CC--------CCEE
Confidence 3467777663 34567777776554333222111 1 1468888876553 22221 11 2368
Q ss_pred EEEECCCCCceecccCCCccccccCCcceEEE---CceEEEEeeccCCCccEEEEEEcCCceeeeecCCCCCCCCCcEEE
Q 045569 185 AVYSLSTNSWRYCDCFKSNHYYMDGAFDSVYL---DGVCYWLSEFRDNDHKVILSFHLGNEVFEEIQEPYIPESTPTILG 261 (362)
Q Consensus 185 eVyss~~~~W~~~~~~~~~~~~~~~~~~~v~~---~G~lywl~~~~~~~~~~il~fD~~~e~~~~i~~P~~~~~~~~~l~ 261 (362)
++++..+..=+.+... .+. ...++.+ +|.|||..... ...|..+++....-+.+- . .. ....-|+
T Consensus 105 ~v~~~dG~~~~~l~~~--~l~----~P~~iavdp~~G~lY~tD~g~---~~~I~r~~~dG~~~~~l~-~-~~-~~P~Gla 172 (628)
T 4a0p_A 105 EVSKLDGQHRQVLVWK--DLD----SPRALALDPAEGFMYWTEWGG---KPKIDRAAMDGSERTTLV-P-NV-GRANGLT 172 (628)
T ss_dssp EEEETTSTTCEEEECS--SCC----CEEEEEEETTTTEEEEEECSS---SCEEEEEETTSCSCEEEE-C-SC-SSEEEEE
T ss_pred EEEecCCCcEEEEEeC--CCC----CcccEEEccCCCeEEEeCCCC---CCEEEEEeCCCCceEEEE-C-CC-CCcceEE
Confidence 8888865432222111 111 1344544 59999987542 458999998766544432 1 11 1112344
Q ss_pred EE--CCeEEEEEEcCCCCeEEEEEeeC-CeeEEEEEeCCCCCceeeEEEe-eCCcEEEEec-CCeEEEEeCCCCcE
Q 045569 262 IY--NHSLCLLLSHNIENYYDIWVMKY-KCWIKQLSLGPLNGVRTPLGFW-KKGAFFVHST-NEQLLLYDPNTQEM 332 (362)
Q Consensus 262 ~~--~g~L~l~~~~~~~~~~~IW~l~~-~~W~~~~~i~~~~~~~~~~~~~-~~g~il~~~~-~~~~~~yd~~~~~~ 332 (362)
.- +++|+++... ...+...-++. .. ++.. . ....|.++. .++.+|+... .+.+...|..+++-
T Consensus 173 lD~~~~~LY~aD~~--~~~I~~~d~dG~~~--~v~~-~---~l~~P~glav~~~~ly~tD~~~~~I~~~dk~tg~~ 240 (628)
T 4a0p_A 173 IDYAKRRLYWTDLD--TNLIESSNMLGLNR--EVIA-D---DLPHPFGLTQYQDYIYWTDWSRRSIERANKTSGQN 240 (628)
T ss_dssp EETTTTEEEEEETT--TTEEEEEETTSCSC--EEEE-E---CCSCEEEEEEETTEEEEEETTTTEEEEEETTTCCS
T ss_pred EccccCEEEEEECC--CCEEEEEcCCCCce--EEee-c---cCCCceEEEEECCEEEEecCCCCEEEEEECCCCCc
Confidence 33 6788887753 34444333333 22 2211 1 223455443 2366777654 67799999877653
No 231
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=23.86 E-value=4.5e+02 Score=24.57 Aligned_cols=79 Identities=9% Similarity=-0.080 Sum_probs=47.1
Q ss_pred eEEEEECCCC--CceecccCCCccccccCCcceEEECceEEEEeeccCCCccEEEEEEcCCcee-eeecCCCCCCCCCcE
Q 045569 183 HVAVYSLSTN--SWRYCDCFKSNHYYMDGAFDSVYLDGVCYWLSEFRDNDHKVILSFHLGNEVF-EEIQEPYIPESTPTI 259 (362)
Q Consensus 183 ~~eVyss~~~--~W~~~~~~~~~~~~~~~~~~~v~~~G~lywl~~~~~~~~~~il~fD~~~e~~-~~i~~P~~~~~~~~~ 259 (362)
.+..++..++ .|+.-...+ .. ....+..+|.+|.-..+ ..+.+||.++.+- -..++|...... ..
T Consensus 467 ~l~A~D~~tG~~~W~~~~~~~--~~----~g~~~tagglvf~g~~d-----g~l~A~D~~tG~~lW~~~~~~g~~a~-P~ 534 (582)
T 1flg_A 467 SLRAMDPVSGKVVWEHKEHLP--LW----AGVLATAGNLVFTGTGD-----GYFKAFDAKSGKELWKFQTGSGIVSP-PI 534 (582)
T ss_dssp EEEEECTTTCCEEEEEEESSC--CC----SCCEEETTTEEEEECTT-----SEEEEEETTTCCEEEEEECSSCCCSC-CE
T ss_pred eEEEEECCCCCEEEEecCCCC--Cc----ccceEeCCCEEEEECCC-----CcEEEEECCCCCEEEEecCCCCcccC-ce
Confidence 4666777776 487643221 11 13345668888874433 4899999986543 335666544332 22
Q ss_pred EEEECCeEEEEEEc
Q 045569 260 LGIYNHSLCLLLSH 273 (362)
Q Consensus 260 l~~~~g~L~l~~~~ 273 (362)
.-+.+|+++++...
T Consensus 535 ~y~~~G~qYv~~~~ 548 (582)
T 1flg_A 535 TWEQDGEQYLGVTV 548 (582)
T ss_dssp EEEETTEEEEEEEE
T ss_pred EEEECCEEEEEEEc
Confidence 33579999887764
No 232
>2jp2_A Spred-2, sprouty-related, EVH1 domain-containing protein 2; solution structure, structural genomics, structural genomics consortium, SGC; NMR {Homo sapiens}
Probab=23.45 E-value=76 Score=23.15 Aligned_cols=42 Identities=0% Similarity=-0.298 Sum_probs=24.9
Q ss_pred eEEEEeCCCcccccCCCCCcCCCCcccceeeeeeeee---cCCCCCeEEEEEE
Q 045569 119 RITLWNRATKESRVLPKCTTVFPKYTSIFCKCTGFGL---DPMSTDYKLVLIF 168 (362)
Q Consensus 119 ~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~---d~~~~~ykVv~~~ 168 (362)
.++++||.++.|...-... .. ...+.+-+ |...+.|+|+...
T Consensus 21 ~Vm~~D~~~~~W~p~~~g~---ls-----~v~v~~~~~~~d~~~~~yrI~~~~ 65 (126)
T 2jp2_A 21 VVMTRDDSSGGWFPQEGGG---IS-----RVGVCKVMHPEGNGRSGFLIHGER 65 (126)
T ss_dssp EEEEECTTSSSSEECSCCS---CE-----EEEEECCBCTTCSSCBCEEEEEEE
T ss_pred EEeeEcCCCCCEeeCCCCC---cc-----cEEEEEecCCCCCCCCEEEEEEEE
Confidence 4788899999885433221 11 01222233 5667899999874
No 233
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=23.42 E-value=3.3e+02 Score=22.81 Aligned_cols=94 Identities=9% Similarity=0.122 Sum_probs=52.5
Q ss_pred cEEEEEEcCCceeee-ecCCCCCCCCCcEEEE-ECCeEEEEEEcCCCCeEEEEEeeCCeeEEEEEeCCCCCceeeEEEee
Q 045569 232 KVILSFHLGNEVFEE-IQEPYIPESTPTILGI-YNHSLCLLLSHNIENYYDIWVMKYKCWIKQLSLGPLNGVRTPLGFWK 309 (362)
Q Consensus 232 ~~il~fD~~~e~~~~-i~~P~~~~~~~~~l~~-~~g~L~l~~~~~~~~~~~IW~l~~~~W~~~~~i~~~~~~~~~~~~~~ 309 (362)
..|..+|+.+.+... +.... .. ...+.. -+|.+.+.+. ....+.||-++... ....+.........+++..
T Consensus 164 ~~i~~wd~~~~~~~~~~~~h~--~~-v~~~~~~~~~~~l~sg~--~d~~v~~wd~~~~~--~~~~~~~h~~~v~~v~~~p 236 (340)
T 1got_B 164 TTCALWDIETGQQTTTFTGHT--GD-VMSLSLAPDTRLFVSGA--CDASAKLWDVREGM--CRQTFTGHESDINAICFFP 236 (340)
T ss_dssp SCEEEEETTTTEEEEEECCCS--SC-EEEEEECTTSSEEEEEE--TTSCEEEEETTTCS--EEEEECCCSSCEEEEEECT
T ss_pred CcEEEEECCCCcEEEEEcCCC--Cc-eEEEEECCCCCEEEEEe--CCCcEEEEECCCCe--eEEEEcCCcCCEEEEEEcC
Confidence 468889988765432 22111 11 023332 2566655555 46789999887632 2333432222233455556
Q ss_pred CCcEEEEe-cCCeEEEEeCCCCcE
Q 045569 310 KGAFFVHS-TNEQLLLYDPNTQEM 332 (362)
Q Consensus 310 ~g~il~~~-~~~~~~~yd~~~~~~ 332 (362)
++..++.. .++.+..||+++++.
T Consensus 237 ~~~~l~s~s~d~~v~iwd~~~~~~ 260 (340)
T 1got_B 237 NGNAFATGSDDATCRLFDLRADQE 260 (340)
T ss_dssp TSSEEEEEETTSCEEEEETTTTEE
T ss_pred CCCEEEEEcCCCcEEEEECCCCcE
Confidence 67766654 477899999987653
No 234
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=23.32 E-value=3.1e+02 Score=22.56 Aligned_cols=67 Identities=9% Similarity=-0.034 Sum_probs=39.0
Q ss_pred CCeEEEEEEcCCCCeEEEEEeeCCeeEEEEEeCCCCCceeeEEEeeCCc-EEEEec-CCeEEEEeCCCCcEE
Q 045569 264 NHSLCLLLSHNIENYYDIWVMKYKCWIKQLSLGPLNGVRTPLGFWKKGA-FFVHST-NEQLLLYDPNTQEMR 333 (362)
Q Consensus 264 ~g~L~l~~~~~~~~~~~IW~l~~~~W~~~~~i~~~~~~~~~~~~~~~g~-il~~~~-~~~~~~yd~~~~~~~ 333 (362)
++.+++... ....+.+|-++.....+....+.. .....+.+..+|+ +++... ++.+..||+++++..
T Consensus 10 ~~~~~v~~~--~~~~v~~~d~~~~~~~~~~~~~~~-~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~ 78 (349)
T 1jmx_B 10 GHEYMIVTN--YPNNLHVVDVASDTVYKSCVMPDK-FGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNT 78 (349)
T ss_dssp TCEEEEEEE--TTTEEEEEETTTTEEEEEEECSSC-CSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEE
T ss_pred CCEEEEEeC--CCCeEEEEECCCCcEEEEEecCCC-CCCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcEE
Confidence 456666555 356788887766543333333320 0123345556776 444443 678999999987754
No 235
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=23.08 E-value=5.2e+02 Score=25.01 Aligned_cols=200 Identities=12% Similarity=0.080 Sum_probs=0.0
Q ss_pred ceEeeeeeeeEEEeecCceEEEEeCCCcccccCCCCC-----cCCCCcccceeeeeeeeecCCCCCeEEEEEEEEeeccc
Q 045569 101 GELVGPYNGIFCIFGNNNRITLWNRATKESRVLPKCT-----TVFPKYTSIFCKCTGFGLDPMSTDYKLVLIFTLWNEKL 175 (362)
Q Consensus 101 ~~~~~s~~GLl~~~~~~~~~~V~NP~T~~~~~LP~~~-----~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~ 175 (362)
..+....+|-|-+.....-+..+||.++++...+... ...... ...+..|+..+ .+.+.
T Consensus 360 ~~i~~d~~g~lWiGt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~l~~~~------v~~i~~d~~g~---~lWig------- 423 (795)
T 4a2l_A 360 SCIVEDKDKNLWIGTNDGGLNLYNPITQRFTSYTLQEDESARGIGSNN------IKAVYVDEKKS---LVYIG------- 423 (795)
T ss_dssp EEEEECTTSCEEEEESSSCEEEECTTTCCEEEECCC------CCSCSC------EEEEEEETTTT---EEEEE-------
T ss_pred EEEEECCCCCEEEEECCCCeEEEcCCCCcEEEEecCCCCcccCCCCcc------EEEEEEcCCCC---EEEEE-------
Q ss_pred ccccCcceEEEEECCCCCceecccCCCccccccCCcceEEE----CceEEEEeeccCCCccEEEEEEcCCceeeeecCC-
Q 045569 176 DLLYEFSHVAVYSLSTNSWRYCDCFKSNHYYMDGAFDSVYL----DGVCYWLSEFRDNDHKVILSFHLGNEVFEEIQEP- 250 (362)
Q Consensus 176 ~~~~~~~~~eVyss~~~~W~~~~~~~~~~~~~~~~~~~v~~----~G~lywl~~~~~~~~~~il~fD~~~e~~~~i~~P- 250 (362)
.....+..|+..++.++......+..+. .....+ +|.++.-+..+ +..||..+++|..+...
T Consensus 424 ---t~~~Gl~~~d~~~~~~~~~~~~~~~l~~----~~v~~i~~d~~g~lwigt~~G------l~~~~~~~~~~~~~~~~~ 490 (795)
T 4a2l_A 424 ---THAGGLSILHRNSGQVENFNQRNSQLVN----ENVYAILPDGEGNLWLGTLSA------LVRFNPEQRSFTTIEKEK 490 (795)
T ss_dssp ---ETTTEEEEEETTTCCEEEECTTTSCCSC----SCEEEEEECSSSCEEEEESSC------EEEEETTTTEEEECCBCT
T ss_pred ---eCcCceeEEeCCCCcEEEeecCCCCcCC----CeeEEEEECCCCCEEEEecCc------eeEEeCCCCeEEEccccc
Q ss_pred --CCCCCCC--cEEEEECCeEEEEEEcCCCCeEEEEEeeCCeeEEEEEeCCCCCc----eeeEEEeeCCcEEEEecCCeE
Q 045569 251 --YIPESTP--TILGIYNHSLCLLLSHNIENYYDIWVMKYKCWIKQLSLGPLNGV----RTPLGFWKKGAFFVHSTNEQL 322 (362)
Q Consensus 251 --~~~~~~~--~~l~~~~g~L~l~~~~~~~~~~~IW~l~~~~W~~~~~i~~~~~~----~~~~~~~~~g~il~~~~~~~~ 322 (362)
....... .-....+|.|.+.+ . ..+..|..+...+ ........... ...+....+|.|++.... .+
T Consensus 491 ~~~~~~~~~i~~i~~d~~g~lWigt---~-~Gl~~~~~~~~~~-~~~~~~~~~~l~~~~i~~i~~d~~g~lWigT~~-Gl 564 (795)
T 4a2l_A 491 DGTPVVSKQITTLFRDSHKRLWIGG---E-EGLSVFKQEGLDI-QKASILPVSNVTKLFTNCIYEASNGIIWVGTRE-GF 564 (795)
T ss_dssp TCCBCCCCCEEEEEECTTCCEEEEE---S-SCEEEEEEETTEE-EECCCSCSCGGGGSCEEEEEECTTSCEEEEESS-CE
T ss_pred cccccCCceEEEEEECCCCCEEEEe---C-CceEEEeCCCCeE-EEecCCCCCCCCCCeeEEEEECCCCCEEEEeCC-Cc
Q ss_pred EEEeCCCCcEEEe
Q 045569 323 LLYDPNTQEMRDL 335 (362)
Q Consensus 323 ~~yd~~~~~~~~v 335 (362)
..||+++++++.+
T Consensus 565 ~~~d~~~~~~~~~ 577 (795)
T 4a2l_A 565 YCFNEKDKQIKRY 577 (795)
T ss_dssp EEEETTTTEEEEE
T ss_pred eeECCCCCcEEEe
No 236
>3s3x_D Psalmotoxin-1; acid-sensing, ION channel, membrane protein, sodium channel, membrane, glycoprotein, ION transport, membrane; HET: NAG; 2.99A {Psalmopoeus cambridgei} PDB: 2kni_A 1lmm_A 4fz0_M* 4fz1_D*
Probab=22.69 E-value=34 Score=17.90 Aligned_cols=22 Identities=14% Similarity=0.161 Sum_probs=15.7
Q ss_pred eeeeeeEEEeecCceEEEEeCCC
Q 045569 105 GPYNGIFCIFGNNNRITLWNRAT 127 (362)
Q Consensus 105 ~s~~GLl~~~~~~~~~~V~NP~T 127 (362)
++|.||-|...+.+ +-||-|-|
T Consensus 15 dcceglecwkrrrs-fevcvpkt 36 (37)
T 3s3x_D 15 DCCEGLECWKRRRS-FEVCVPKT 36 (37)
T ss_dssp CBCTTEEEECCSSS-CCEEEECC
T ss_pred chhhhHHHHHhccc-eeeecCCC
Confidence 47889998875443 77777765
No 237
>3s9j_A Member of DUF4221 family; 6-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.75A {Bacteroides vulgatus}
Probab=21.97 E-value=4.1e+02 Score=23.34 Aligned_cols=81 Identities=12% Similarity=0.067 Sum_probs=59.0
Q ss_pred EEEEECCeEEEEEEcCCCC--eEEEEEeeCCeeEEEEEeCC--CCCceeeE-EE--eeCCcEEEEe-cCCeEEEEeCCCC
Q 045569 259 ILGIYNHSLCLLLSHNIEN--YYDIWVMKYKCWIKQLSLGP--LNGVRTPL-GF--WKKGAFFVHS-TNEQLLLYDPNTQ 330 (362)
Q Consensus 259 ~l~~~~g~L~l~~~~~~~~--~~~IW~l~~~~W~~~~~i~~--~~~~~~~~-~~--~~~g~il~~~-~~~~~~~yd~~~~ 330 (362)
.....+|+-++........ .+++.-|+..+..+...+.. ++++..+. ++ ...+.|++.. ...++..+|.+.+
T Consensus 32 ~~~~~~~k~yL~~~N~~~~~~~i~~iDL~~~kl~k~i~~ekEGPNgi~~~~~~~~i~~~DsI~i~~~~~~~i~l~n~~G~ 111 (369)
T 3s9j_A 32 FQFEENGKEYLHFENTQKSLYDIVIFDIENQQIAKRIPLHKTGPNGLPAVFGSRPSPDSQYILVAQNNISRLSSINSQGE 111 (369)
T ss_dssp EEEEETTEEEEEEEECSTTCCEEEEEETTTTEEEEEEECBSSSTTBCTTCCCEEESSSTTSEEEEEGGGTEEEEECTTCC
T ss_pred EEEecCCcEEEEEeCCCCCcCcEEEEECCCCceeeeeccccCCCCCcccceeeEEecCCCEEEEEeCCcceEEEECCCce
Confidence 3345899988888876667 99999999988888887763 33455552 23 3567788765 3568999999999
Q ss_pred cEEEeeEee
Q 045569 331 EMRDLGRKS 339 (362)
Q Consensus 331 ~~~~v~~~~ 339 (362)
..+++.+..
T Consensus 112 ~~~k~~~~~ 120 (369)
T 3s9j_A 112 IIRNYNFQT 120 (369)
T ss_dssp EEEEEECCC
T ss_pred EEEEEecCC
Confidence 888887643
No 238
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=21.53 E-value=3.3e+02 Score=22.18 Aligned_cols=93 Identities=9% Similarity=0.051 Sum_probs=47.5
Q ss_pred cEEEEEEcCCceeee-ecCCCCCCCCC-cEEEEECCeEEEEEEcCCCCeEEEEEeeCCeeEEEEEeCCCCCceeeEEEee
Q 045569 232 KVILSFHLGNEVFEE-IQEPYIPESTP-TILGIYNHSLCLLLSHNIENYYDIWVMKYKCWIKQLSLGPLNGVRTPLGFWK 309 (362)
Q Consensus 232 ~~il~fD~~~e~~~~-i~~P~~~~~~~-~~l~~~~g~L~l~~~~~~~~~~~IW~l~~~~W~~~~~i~~~~~~~~~~~~~~ 309 (362)
..|..+|+.+.+... +.......... ......+|.+.+.+. ....+.||-++... ....+.........+.+..
T Consensus 214 ~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~--~dg~i~vwd~~~~~--~~~~~~~h~~~v~~~~~~p 289 (312)
T 4ery_A 214 NTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGS--EDNLVYIWNLQTKE--IVQKLQGHTDVVISTACHP 289 (312)
T ss_dssp TEEEEEETTTTEEEEEECSSCCSSSCCCEEEECSSSCEEEECC--TTSCEEEEETTTCC--EEEEECCCSSCEEEEEECS
T ss_pred CeEEEEECCCCcEEEEEEecCCceEEEEEEEEeCCCcEEEEEC--CCCEEEEEECCCch--hhhhhhccCCcEEEEeecC
Confidence 478889988765432 33222111111 122223455544443 46789999987632 3334432222223344555
Q ss_pred CCcEEEEe---cCCeEEEEeCC
Q 045569 310 KGAFFVHS---TNEQLLLYDPN 328 (362)
Q Consensus 310 ~g~il~~~---~~~~~~~yd~~ 328 (362)
++.++... .++.+..|+.+
T Consensus 290 ~~~~l~s~~~~~d~~i~~W~~d 311 (312)
T 4ery_A 290 TENIIASAALENDKTIKLWKSD 311 (312)
T ss_dssp SSSEEEEEECTTTCCEEEEECC
T ss_pred cCCceEEEEccCCccEEEecCC
Confidence 66666544 25667777754
No 239
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=21.30 E-value=4.4e+02 Score=23.55 Aligned_cols=69 Identities=12% Similarity=0.085 Sum_probs=44.6
Q ss_pred CCeEEEEEEcCC-----CCeEEEEEeeCCeeEEEEEeCCCCCceeeEEEeeCCc-EEEEec--CCeEEEEeCCCCcEE
Q 045569 264 NHSLCLLLSHNI-----ENYYDIWVMKYKCWIKQLSLGPLNGVRTPLGFWKKGA-FFVHST--NEQLLLYDPNTQEMR 333 (362)
Q Consensus 264 ~g~L~l~~~~~~-----~~~~~IW~l~~~~W~~~~~i~~~~~~~~~~~~~~~g~-il~~~~--~~~~~~yd~~~~~~~ 333 (362)
+++|++...... ...=+||+.+-..+..+.+|+... ...-+.+..+|+ .++..+ ++.+.++|..+.+..
T Consensus 330 g~rlyVa~~~~~~gthk~~s~~VsVID~~T~kvv~~I~vg~-~P~gia~spDg~~~lyv~n~~s~~VsVID~~t~kvv 406 (426)
T 3c75_H 330 SDRIYLLVDQRDEWKHKAASRFVVVLNAETGERINKIELGH-EIDSINVSQDAEPLLYALSAGTQTLHIYDAATGEEL 406 (426)
T ss_dssp GTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEEE-EECEEEECCSSSCEEEEEETTTTEEEEEETTTCCEE
T ss_pred CCEEEEEecccccccccCCCCEEEEEECCCCeEEEEEECCC-CcCeEEEccCCCEEEEEEcCCCCeEEEEECCCCCEE
Confidence 456777664211 123478999887777888886421 123345566777 655544 788999999998764
No 240
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=20.61 E-value=5.4e+02 Score=24.23 Aligned_cols=79 Identities=6% Similarity=-0.017 Sum_probs=46.3
Q ss_pred eEEEEECCCC--CceecccCCCccccccCCcceEEECceEEEEeeccCCCccEEEEEEcCCcee-eeecCCCCCCCCCcE
Q 045569 183 HVAVYSLSTN--SWRYCDCFKSNHYYMDGAFDSVYLDGVCYWLSEFRDNDHKVILSFHLGNEVF-EEIQEPYIPESTPTI 259 (362)
Q Consensus 183 ~~eVyss~~~--~W~~~~~~~~~~~~~~~~~~~v~~~G~lywl~~~~~~~~~~il~fD~~~e~~-~~i~~P~~~~~~~~~ 259 (362)
.+..++..++ .|+.-... +. . ....+..+|.+|.-+.+ ..+.+||.++.+- -..++|...... ..
T Consensus 454 ~l~A~D~~tG~~~W~~~~~~----~~-~-~g~~~tagg~vf~gt~d-----g~l~A~D~~tG~~lW~~~l~~g~~~~-P~ 521 (599)
T 1w6s_A 454 QIKAYNAITGDYKWEKMERF----AV-W-GGTMATAGDLVFYGTLD-----GYLKARDSDTGDLLWKFKIPSGAIGY-PM 521 (599)
T ss_dssp EEEEECTTTCCEEEEEEESS----CC-C-SBCEEETTTEEEEECTT-----SEEEEEETTTCCEEEEEECSSCCCSC-CE
T ss_pred eEEEEECCCCCEEeEecCCC----Cc-c-CcceEecCCEEEEECCC-----CeEEEEECCCCCEEEEeeCCCCcEec-cE
Confidence 4566666666 47764321 11 0 12234567888875433 3899999987543 234677654433 33
Q ss_pred EEEECCeEEEEEEc
Q 045569 260 LGIYNHSLCLLLSH 273 (362)
Q Consensus 260 l~~~~g~L~l~~~~ 273 (362)
.-+.+|+++++...
T Consensus 522 ~y~~~G~qyv~~~~ 535 (599)
T 1w6s_A 522 TYTHKGTQYVAIYY 535 (599)
T ss_dssp EEEETTEEEEEEEE
T ss_pred EEEeCCEEEEEEEc
Confidence 34689998887764
No 241
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=20.60 E-value=5.5e+02 Score=24.32 Aligned_cols=154 Identities=8% Similarity=-0.031 Sum_probs=79.3
Q ss_pred eeeeeecCCCCCeEEEEEEEEeecccccccCcceEEEEECCCCCceecccCCCccccccCCcceEEE---CceEEEEeec
Q 045569 150 CTGFGLDPMSTDYKLVLIFTLWNEKLDLLYEFSHVAVYSLSTNSWRYCDCFKSNHYYMDGAFDSVYL---DGVCYWLSEF 226 (362)
Q Consensus 150 ~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~eVyss~~~~W~~~~~~~~~~~~~~~~~~~v~~---~G~lywl~~~ 226 (362)
..|+.||+..+. |...- .. ...+..++......+.+-.. ... ...++.+ +|.+||....
T Consensus 39 ~~~l~~d~~~~~--lywtD--~~--------~~~I~r~~~~g~~~~~v~~~--g~~----~P~GlAvD~~~~~LY~tD~~ 100 (628)
T 4a0p_A 39 ASALDFDVTDNR--IYWTD--IS--------LKTISRAFMNGSALEHVVEF--GLD----YPEGMAVDWLGKNLYWADTG 100 (628)
T ss_dssp EEEEEEETTTTE--EEEEE--TT--------TTEEEEEETTSCSCEEEECS--SCS----CCCEEEEETTTTEEEEEETT
T ss_pred eEEEEEECCCCE--EEEEE--CC--------CCeEEEEECCCCCcEEEEeC--CCC----CcceEEEEeCCCEEEEEECC
Confidence 688999986653 33221 01 12466666655444433221 111 1445555 5899998764
Q ss_pred cCCCccEEEEEEcCCceeeeecCCCCCCCCCcEEEEE--CCeEEEEEEcCCCCeEEEEEeeCCeeEEEEEeCCCCCceee
Q 045569 227 RDNDHKVILSFHLGNEVFEEIQEPYIPESTPTILGIY--NHSLCLLLSHNIENYYDIWVMKYKCWIKQLSLGPLNGVRTP 304 (362)
Q Consensus 227 ~~~~~~~il~fD~~~e~~~~i~~P~~~~~~~~~l~~~--~g~L~l~~~~~~~~~~~IW~l~~~~W~~~~~i~~~~~~~~~ 304 (362)
...|.++|+....-..+-. ... .....++.- +|.|+..... ....+...-|+...-..+ +. .+..|
T Consensus 101 ----~~~I~v~~~dG~~~~~l~~-~~l-~~P~~iavdp~~G~lY~tD~g-~~~~I~r~~~dG~~~~~l--~~---~~~~P 168 (628)
T 4a0p_A 101 ----TNRIEVSKLDGQHRQVLVW-KDL-DSPRALALDPAEGFMYWTEWG-GKPKIDRAAMDGSERTTL--VP---NVGRA 168 (628)
T ss_dssp ----TTEEEEEETTSTTCEEEEC-SSC-CCEEEEEEETTTTEEEEEECS-SSCEEEEEETTSCSCEEE--EC---SCSSE
T ss_pred ----CCEEEEEecCCCcEEEEEe-CCC-CCcccEEEccCCCeEEEeCCC-CCCEEEEEeCCCCceEEE--EC---CCCCc
Confidence 3589999987654333311 111 111345544 7888876542 233444333443221111 12 33455
Q ss_pred EEEe--e-CCcEEEEec-CCeEEEEeCCCCcEE
Q 045569 305 LGFW--K-KGAFFVHST-NEQLLLYDPNTQEMR 333 (362)
Q Consensus 305 ~~~~--~-~g~il~~~~-~~~~~~yd~~~~~~~ 333 (362)
.++. . ++.||+... ...+..+|++.+..+
T Consensus 169 ~GlalD~~~~~LY~aD~~~~~I~~~d~dG~~~~ 201 (628)
T 4a0p_A 169 NGLTIDYAKRRLYWTDLDTNLIESSNMLGLNRE 201 (628)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEEETTSCSCE
T ss_pred ceEEEccccCEEEEEECCCCEEEEEcCCCCceE
Confidence 5443 3 356766654 567888888765543
No 242
>1rmk_A MU-O-conotoxin mrvib; beta sheet, cystine knot; NMR {Conus marmoreus} SCOP: g.3.6.1
Probab=20.10 E-value=11 Score=19.37 Aligned_cols=13 Identities=23% Similarity=0.235 Sum_probs=10.1
Q ss_pred ceEeeeeeeeEEE
Q 045569 101 GELVGPYNGIFCI 113 (362)
Q Consensus 101 ~~~~~s~~GLl~~ 113 (362)
.-++.+|.||+|.
T Consensus 14 ~G~i~CC~GLIC~ 26 (31)
T 1rmk_A 14 LGFVYCCPGLICG 26 (31)
T ss_dssp TCCCEESTTCCBC
T ss_pred EEEEEecCCceEe
Confidence 4467889999885
No 243
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=20.06 E-value=2.7e+02 Score=24.40 Aligned_cols=65 Identities=14% Similarity=0.144 Sum_probs=37.5
Q ss_pred CCeEEEEEEcCCCCeEEEEEeeC-CeeEEEEEeCCCCCceeeEEEeeCCc-EEEE-ecCCeEEEEeCCCC
Q 045569 264 NHSLCLLLSHNIENYYDIWVMKY-KCWIKQLSLGPLNGVRTPLGFWKKGA-FFVH-STNEQLLLYDPNTQ 330 (362)
Q Consensus 264 ~g~L~l~~~~~~~~~~~IW~l~~-~~W~~~~~i~~~~~~~~~~~~~~~g~-il~~-~~~~~~~~yd~~~~ 330 (362)
++.+.+++. ....+.||-+.. ........+.....-...+.+..++. +++. ..++.+.+||+++.
T Consensus 243 ~~~~l~s~~--~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~ 310 (430)
T 2xyi_A 243 HESLFGSVA--DDQKLMIWDTRNNNTSKPSHTVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNL 310 (430)
T ss_dssp CTTEEEEEE--TTSEEEEEETTCSCSSSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCT
T ss_pred CCCEEEEEe--CCCeEEEEECCCCCCCcceeEeecCCCCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCC
Confidence 455665555 467999999976 22222333322222233445555555 5544 44788999999873
Done!