BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 045570
(468 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2ACV|A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1
pdb|2ACV|B Chain B, Crystal Structure Of Medicago Truncatula Ugt71g1
Length = 463
Score = 473 bits (1217), Expect = e-133, Method: Compositional matrix adjust.
Identities = 248/471 (52%), Positives = 325/471 (69%), Gaps = 28/471 (5%)
Query: 2 KKAELIFVPSPGIGHLVSTLEFAKHLTDRDDRISVTILSMKLAVAPWVDAYTKSLTDSQP 61
K +ELIF+P+PGIGHL S LEFAK LT+ D + +T+ +K P+ D+Y KS+ SQP
Sbjct: 8 KNSELIFIPAPGIGHLASALEFAKLLTNHDKNLYITVFCIKFPGMPFADSYIKSVLASQP 67
Query: 62 RICXXXXXXXXXXXXXXXKKSPEYFISLVVESHLPNVKNIVSSRSNSGSLQVTGLVLDFF 121
+I K SPE++I +ES +P+VK + + ++ +V GLVLDFF
Sbjct: 68 QIQLIDLPEVEPPPQELLK-SPEFYILTFLESLIPHVKATIKTILSN---KVVGLVLDFF 123
Query: 122 CVSMVDIAKELSLPSYMFLTSNMGFLRLMLYLPTRQDRISTVFESSDDE---LLIPGITS 178
CVSM+D+ E +PSY+FLTSN+GFL LML L RQ I VF+ SD + L IPGI++
Sbjct: 124 CVSMIDVGNEFGIPSYLFLTSNVGFLSLMLSLKNRQ--IEEVFDDSDRDHQLLNIPGISN 181
Query: 179 PVPVCVMPSCLFNKDGGHATLVKLAQRFKDVDGIIVNTFHELEPYAVNAF--SGDLNPPL 236
VP V+P FNKDGG+ KLA+RF+D GIIVNTF +LE +++A + PP+
Sbjct: 182 QVPSNVLPDACFNKDGGYIAYYKLAERFRDTKGIIVNTFSDLEQSSIDALYDHDEKIPPI 241
Query: 237 YTAGPVLHLKSQPNPDLDEAQYQKIFQWLDDLAESSVVFLCFGSSG-SFDVAQVKEIAIG 295
Y GP+L LK QPNP LD+AQ+ I +WLD+ + SVVFLCFGS G SF +Q++EIA+G
Sbjct: 242 YAVGPLLDLKGQPNPKLDQAQHDLILKWLDEQPDKSVVFLCFGSMGVSFGPSQIREIALG 301
Query: 296 LERSGYNFLWSLRVSSPKDEVSAHRYVTNNGVFPEGFLE--RIKGRGMIWGWVPQVEILA 353
L+ SG FLWS SA + VFPEGFLE ++G+GMI GW PQVE+LA
Sbjct: 302 LKHSGVRFLWS---------NSAEK-----KVFPEGFLEWMELEGKGMICGWAPQVEVLA 347
Query: 354 HKAIGGFVSHCGWNSILESLWYGVPIATWPIYAEQQLNAFRMVKELGLALDLRLDYRVGS 413
HKAIGGFVSHCGWNSILES+W+GVPI TWPIYAEQQLNAFR+VKE G+ L LR+DYR GS
Sbjct: 348 HKAIGGFVSHCGWNSILESMWFGVPILTWPIYAEQQLNAFRLVKEWGVGLGLRVDYRKGS 407
Query: 414 DLVMAGDIESAVRCLMDGENKIRKKVKEMAEISRKSLMEGGSSFNSIGQFI 464
D+V A +IE ++ LMD ++ + KKV+EM E+SR ++++GGSS S+G+ I
Sbjct: 408 DVVAAEEIEKGLKDLMDKDSIVHKKVQEMKEMSRNAVVDGGSSLISVGKLI 458
>pdb|2ACW|A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 Complexed
With Udp-Glucose
pdb|2ACW|B Chain B, Crystal Structure Of Medicago Truncatula Ugt71g1 Complexed
With Udp-Glucose
Length = 465
Score = 473 bits (1217), Expect = e-133, Method: Compositional matrix adjust.
Identities = 248/471 (52%), Positives = 325/471 (69%), Gaps = 28/471 (5%)
Query: 2 KKAELIFVPSPGIGHLVSTLEFAKHLTDRDDRISVTILSMKLAVAPWVDAYTKSLTDSQP 61
K +ELIF+P+PGIGHL S LEFAK LT+ D + +T+ +K P+ D+Y KS+ SQP
Sbjct: 8 KNSELIFIPAPGIGHLASALEFAKLLTNHDKNLYITVFCIKFPGMPFADSYIKSVLASQP 67
Query: 62 RICXXXXXXXXXXXXXXXKKSPEYFISLVVESHLPNVKNIVSSRSNSGSLQVTGLVLDFF 121
+I K SPE++I +ES +P+VK + + ++ +V GLVLDFF
Sbjct: 68 QIQLIDLPEVEPPPQELLK-SPEFYILTFLESLIPHVKATIKTILSN---KVVGLVLDFF 123
Query: 122 CVSMVDIAKELSLPSYMFLTSNMGFLRLMLYLPTRQDRISTVFESSDDE---LLIPGITS 178
CVSM+D+ E +PSY+FLTSN+GFL LML L RQ I VF+ SD + L IPGI++
Sbjct: 124 CVSMIDVGNEFGIPSYLFLTSNVGFLSLMLSLKNRQ--IEEVFDDSDRDHQLLNIPGISN 181
Query: 179 PVPVCVMPSCLFNKDGGHATLVKLAQRFKDVDGIIVNTFHELEPYAVNAF--SGDLNPPL 236
VP V+P FNKDGG+ KLA+RF+D GIIVNTF +LE +++A + PP+
Sbjct: 182 QVPSNVLPDACFNKDGGYIAYYKLAERFRDTKGIIVNTFSDLEQSSIDALYDHDEKIPPI 241
Query: 237 YTAGPVLHLKSQPNPDLDEAQYQKIFQWLDDLAESSVVFLCFGSSG-SFDVAQVKEIAIG 295
Y GP+L LK QPNP LD+AQ+ I +WLD+ + SVVFLCFGS G SF +Q++EIA+G
Sbjct: 242 YAVGPLLDLKGQPNPKLDQAQHDLILKWLDEQPDKSVVFLCFGSMGVSFGPSQIREIALG 301
Query: 296 LERSGYNFLWSLRVSSPKDEVSAHRYVTNNGVFPEGFLE--RIKGRGMIWGWVPQVEILA 353
L+ SG FLWS SA + VFPEGFLE ++G+GMI GW PQVE+LA
Sbjct: 302 LKHSGVRFLWS---------NSAEK-----KVFPEGFLEWMELEGKGMICGWAPQVEVLA 347
Query: 354 HKAIGGFVSHCGWNSILESLWYGVPIATWPIYAEQQLNAFRMVKELGLALDLRLDYRVGS 413
HKAIGGFVSHCGWNSILES+W+GVPI TWPIYAEQQLNAFR+VKE G+ L LR+DYR GS
Sbjct: 348 HKAIGGFVSHCGWNSILESMWFGVPILTWPIYAEQQLNAFRLVKEWGVGLGLRVDYRKGS 407
Query: 414 DLVMAGDIESAVRCLMDGENKIRKKVKEMAEISRKSLMEGGSSFNSIGQFI 464
D+V A +IE ++ LMD ++ + KKV+EM E+SR ++++GGSS S+G+ I
Sbjct: 408 DVVAAEEIEKGLKDLMDKDSIVHKKVQEMKEMSRNAVVDGGSSLISVGKLI 458
>pdb|2VCE|A Chain A, Characterization And Engineering Of The Bifunctional N-
And O-glucosyltransferase Involved In Xenobiotic
Metabolism In Plants
pdb|2VCH|A Chain A, Characterization And Engineering Of The Bifunctional N-
And O-Glucosyltransferase Involved In Xenobiotic
Metabolism In Plants
pdb|2VG8|A Chain A, Characterization And Engineering Of The Bifunctional N-
And O-Glucosyltransferase Involved In Xenobiotic
Metabolism In Plants
Length = 480
Score = 242 bits (617), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 156/471 (33%), Positives = 238/471 (50%), Gaps = 27/471 (5%)
Query: 2 KKAELIFVPSPGIGHLVSTLEFAKHLTDRDDRISVTILSMKLAVAPWVDAYTKSLTDSQP 61
K + +PSPG+GHL+ +EFAK L +T+ + P A +++ DS P
Sbjct: 5 KTPHVAIIPSPGMGHLIPLVEFAKRLVHLH---GLTVTFVIAGEGPPSKA-QRTVLDSLP 60
Query: 62 RICXXXXXXXXXXXXXXXKKSPEYFISLVVESHLPNVKNIVSSRSNSGSLQVTGLVLDFF 121
E ISL V P ++ + S G L T LV+D F
Sbjct: 61 SSISSVFLPPVDLTDLSSSTRIESRISLTVTRSNPELRKVFDSFVEGGRLP-TALVVDLF 119
Query: 122 CVSMVDIAKELSLPSYMFLTSNMGFLRLMLYLPTRQDRISTVFESSDDELLIPGITSPVP 181
D+A E +P Y+F + L L+LP + +S F + L++PG VP
Sbjct: 120 GTDAFDVAVEFHVPPYIFYPTTANVLSFFLHLPKLDETVSCEFRELTEPLMLPGC---VP 176
Query: 182 VC---VMPSCLFNKDGGHATLVKLAQRFKDVDGIIVNTFHELEPYAVNAFS--GDLNPPL 236
V + KD + L+ +R+K+ +GI+VNTF ELEP A+ A G PP+
Sbjct: 177 VAGKDFLDPAQDRKDDAYKWLLHNTKRYKEAEGILVNTFFELEPNAIKALQEPGLDKPPV 236
Query: 237 YTAGPVLHLKSQPNPDLDEAQYQKIFQWLDDLAESSVVFLCFGSSGSFDVAQVKEIAIGL 296
Y GP++++ Q +E++ +WLD+ SV+++ FGS G+ Q+ E+A+GL
Sbjct: 237 YPVGPLVNIGKQEAKQTEESE---CLKWLDNQPLGSVLYVSFGSGGTLTCEQLNELALGL 293
Query: 297 ERSGYNFLWSLRVSSPKDEVS---AHRYVTNNGVFPEGFLERIKGRG-MIWGWVPQVEIL 352
S FLW +R S S +H P GFLER K RG +I W PQ ++L
Sbjct: 294 ADSEQRFLWVIRSPSGIANSSYFDSHSQTDPLTFLPPGFLERTKKRGFVIPFWAPQAQVL 353
Query: 353 AHKAIGGFVSHCGWNSILESLWYGVPIATWPIYAEQQLNAFRMVKELGLALDLRLDYRVG 412
AH + GGF++HCGWNS LES+ G+P+ WP+YAEQ++NA + +++ A L R G
Sbjct: 354 AHPSTGGFLTHCGWNSTLESVVSGIPLIAWPLYAEQKMNAVLLSEDIRAA----LRPRAG 409
Query: 413 SD-LVMAGDIESAVRCLMDGE--NKIRKKVKEMAEISRKSLMEGGSSFNSI 460
D LV ++ V+ LM+GE +R K+KE+ E + + L + G+S ++
Sbjct: 410 DDGLVRREEVARVVKGLMEGEEGKGVRNKMKELKEAACRVLKDDGTSTKAL 460
>pdb|2C1X|A Chain A, Structure And Activity Of A Flavonoid 3-O
Glucosyltransferase Reveals The Basis For Plant Natural
Product Modification
pdb|2C1Z|A Chain A, Structure And Activity Of A Flavonoid 3-O
Glucosyltransferase Reveals The Basis For Plant Natural
Product Modification
pdb|2C9Z|A Chain A, Structure And Activity Of A Flavonoid 3-0
Glucosyltransferase Reveals The Basis For Plant Natural
Product Modification
Length = 456
Score = 136 bits (343), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 106/364 (29%), Positives = 178/364 (48%), Gaps = 40/364 (10%)
Query: 113 VTGLVLDFFCVSMVDIAKELSLPSYMFLTSNMGFLRLMLYLPTRQDRIS-TVFESSDDEL 171
V+ LV D F D+A E+ + F T+ L +Y+ +++I + + +DEL
Sbjct: 113 VSCLVADAFIWFAADMAAEMGVAWLPFWTAGPNSLSTHVYIDEIREKIGVSGIQGREDEL 172
Query: 172 L--IPGITSPVPVCVMPSCLFNKDGG--HATLVKLAQRFKDVDGIIVNTFHELEPYAVNA 227
L IPG++ + +F L ++ Q + +N+F EL+ ++
Sbjct: 173 LNFIPGMSKVRFRDLQEGIVFGNLNSLFSRMLHRMGQVLPKATAVFINSFEELD----DS 228
Query: 228 FSGDLNPPLYT---AGPVLHLKSQPNPDLDEAQYQKIFQWLDDLAESSVVFLCFGSSGSF 284
+ DL L T GP + P P + QWL + +SVV++ FG+ +
Sbjct: 229 LTNDLKSKLKTYLNIGPFNLIT--PPPVVPNTT--GCLQWLKERKPTSVVYISFGTVTTP 284
Query: 285 DVAQVKEIAIGLERSGYNFLWSLRVSSPKDEVSAHRYVTNNGVFPEGFLERIKGRGMIWG 344
A+V ++ LE S F+WSLR D+ H PEGFLE+ +G GM+
Sbjct: 285 PPAEVVALSEALEASRVPFIWSLR-----DKARVH--------LPEGFLEKTRGYGMVVP 331
Query: 345 WVPQVEILAHKAIGGFVSHCGWNSILESLWYGVPIATWPIYAEQQLNAFRMVKELGLALD 404
W PQ E+LAH+A+G FV+HCGWNS+ ES+ GVP+ P + +Q+LN RMV+++
Sbjct: 332 WAPQAEVLAHEAVGAFVTHCGWNSLWESVAGGVPLICRPFFGDQRLNG-RMVEDV----- 385
Query: 405 LRLDYRVGSDLVMAGDIESAVRCLMDGE--NKIRKKVKEMAEISRKSLMEGGSSFNSIGQ 462
L + R+ + + S ++ E K+R+ ++ + E + +++ GSS +
Sbjct: 386 LEIGVRIEGGVFTKSGLMSCFDQILSQEKGKKLRENLRALRETADRAVGPKGSSTEN--- 442
Query: 463 FISL 466
FI+L
Sbjct: 443 FITL 446
>pdb|2PQ6|A Chain A, Crystal Structure Of Medicago Truncatula Ugt85h2- Insights
Into The Structural Basis Of A Multifunctional (Iso)
Flavonoid Glycosyltransferase
Length = 482
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 81/280 (28%), Positives = 135/280 (48%), Gaps = 35/280 (12%)
Query: 199 LVKLAQRFKDVDGIIVNTFHELEPYAVNAFSGDLNPPLYTAGPVLHLKSQPNPDLDE--- 255
+++A R I++NTF+ELE +NA S + P +Y GP+ L Q P + +
Sbjct: 216 FIEVADRVNKDTTILLNTFNELESDVINALSSTI-PSIYPIGPLPSLLKQ-TPQIHQLDS 273
Query: 256 ------AQYQKIFQWLDDLAESSVVFLCFGSSGSFDVAQVKEIAIGLERSGYNFLWSLRV 309
+ + WL+ SVV++ FGS+ Q+ E A GL +FLW +R
Sbjct: 274 LDSNLWKEDTECLDWLESKEPGSVVYVNFGSTTVMTPEQLLEFAWGLANCKKSFLWIIR- 332
Query: 310 SSPKDEVSAHRYVTNNGVFPEGFLERIKGRGMIWGWVPQVEILAHKAIGGFVSHCGWNSI 369
+ + +F F I RG+I W PQ ++L H +IGGF++HCGWNS
Sbjct: 333 --------PDLVIGGSVIFSSEFTNEIADRGLIASWCPQDKVLNHPSIGGFLTHCGWNST 384
Query: 370 LESLWYGVPIATWPIYAEQQLNAFRMVK--ELGLALDLRLDYRVGSDL---VMAGDIESA 424
ES+ GVP+ WP +A+Q + + E+G+ +D + + L V+AG
Sbjct: 385 TESICAGVPMLCWPFFADQPTDCRFICNEWEIGMEIDTNVKREELAKLINEVIAG----- 439
Query: 425 VRCLMDGENKIRKKVKEMAEISRKSLMEGGSSFNSIGQFI 464
D K+++K E+ + + ++ GG S+ ++ + I
Sbjct: 440 -----DKGKKMKQKAMELKKKAEENTRPGGCSYMNLNKVI 474
>pdb|3HBF|A Chain A, Structure Of Ugt78g1 Complexed With Myricetin And Udp
pdb|3HBJ|A Chain A, Structure Of Ugt78g1 Complexed With Udp
Length = 454
Score = 125 bits (313), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 101/393 (25%), Positives = 177/393 (45%), Gaps = 35/393 (8%)
Query: 82 SPEYFISLVVESHLPNVKNIVSSRSNSGSLQVTGLVLDFFCVSMVDIAKELSLPSYMFLT 141
+P I L +++ N K+++ +T LV D F D+A+E+ T
Sbjct: 87 NPREPIFLFIKAMQENFKHVIDEAVAETGKNITCLVTDAFFWFGADLAEEMHAKWVPLWT 146
Query: 142 SNMGFLRLMLYLP-TRQDRISTVFESSDDELLIPGITSPVPVCVMPSCLFNKDGGHATLV 200
+ L +Y R+ S ++PG + + + D AT++
Sbjct: 147 AGPHSLLTHVYTDLIREKTGSKEVHDVKSIDVLPGFPELKASDLPEGVIKDIDVPFATML 206
Query: 201 -KLAQRFKDVDGIIVNTFHELEPYAVNAFSGDLNPPLYTAGPVLHLKSQPNPDLDEAQYQ 259
K+ + + +N+F + P N + L GP + P +
Sbjct: 207 HKMGLELPRANAVAINSFATIHPLIENELNSKFKL-LLNVGPF----NLTTPQRKVSDEH 261
Query: 260 KIFQWLDDLAESSVVFLCFGSSGSFDVAQVKEIAIGLERSGYNFLWSLRVSSPKDEVSAH 319
+WLD SSVV++ FGS + ++ +A LE G+ F+WS R PK+++
Sbjct: 262 GCLEWLDQHENSSVVYISFGSVVTPPPHELTALAESLEECGFPFIWSFR-GDPKEKL--- 317
Query: 320 RYVTNNGVFPEGFLERIKGRGMIWGWVPQVEILAHKAIGGFVSHCGWNSILESLWYGVPI 379
P+GFLER K +G I W PQVEIL H ++G F++H GWNS+LE + GVP+
Sbjct: 318 ---------PKGFLERTKTKGKIVAWAPQVEILKHSSVGVFLTHSGWNSVLECIVGGVPM 368
Query: 380 ATWPIYAEQQLNAF--RMVKELGLALDLRLDYRVGSDLVMAGDIESAVRCLMDGENK--I 435
+ P + +Q LN V E+G+ +D + ++ I+ A+ M E +
Sbjct: 369 ISRPFFGDQGLNTILTESVLEIGVGVD--------NGVLTKESIKKALELTMSSEKGGIM 420
Query: 436 RKKVKEMAEISRKSLMEGGSS---FNSIGQFIS 465
R+K+ ++ E + K++ + G+S F ++ Q ++
Sbjct: 421 RQKIVKLKESAFKAVEQNGTSAMDFTTLIQIVT 453
>pdb|2O6L|A Chain A, Crystal Structure Of The Udp-Glucuronic Acid Binding
Domain Of The Human Drug Metabolizing
Udp-Glucuronosyltransferase 2b7
pdb|2O6L|B Chain B, Crystal Structure Of The Udp-Glucuronic Acid Binding
Domain Of The Human Drug Metabolizing
Udp-Glucuronosyltransferase 2b7
Length = 170
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Query: 342 IWGWVPQVEILAHKAIGGFVSHCGWNSILESLWYGVPIATWPIYAEQQLNAFRMVKELGL 401
++ W+PQ ++L H F++H G N I E++++G+P P++A+Q N K G
Sbjct: 72 LYKWIPQNDLLGHPKTRAFITHGGANGIYEAIYHGIPXVGIPLFADQPDN-IAHXKARGA 130
Query: 402 ALDLRLDYRVGSDLVMA 418
A+ + + +DL+ A
Sbjct: 131 AVRVDFNTXSSTDLLNA 147
>pdb|2IYA|A Chain A, The Crystal Structure Of Macrolide Glycosyltransferases: A
Blueprint For Antibiotic Engineering
pdb|2IYA|B Chain B, The Crystal Structure Of Macrolide Glycosyltransferases: A
Blueprint For Antibiotic Engineering
Length = 424
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 38/64 (59%), Gaps = 3/64 (4%)
Query: 345 WVPQVEILAHKAIGGFVSHCGWNSILESLWYGVPIATWPIYAEQQLNAFRMVKELGLALD 404
WVPQ++IL + F++H G S +E+L VP+ P AEQ +NA R+V ELGL
Sbjct: 312 WVPQLDILTKAS--AFITHAGMGSTMEALSNAVPMVAVPQIAEQTMNAERIV-ELGLGRH 368
Query: 405 LRLD 408
+ D
Sbjct: 369 IPRD 372
>pdb|3IA7|A Chain A, Crystal Structure Of Calg4, The Calicheamicin
Glycosyltransferase
pdb|3IA7|B Chain B, Crystal Structure Of Calg4, The Calicheamicin
Glycosyltransferase
Length = 402
Score = 34.7 bits (78), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Query: 345 WVPQVEILAHKAIGGFVSHCGWNSILESLWYGVPIATWPIYAEQQLNAFRMVKELGLALD 404
W+P +LAH ++H ++LE+ GVP+ P +A + + V ELGL
Sbjct: 288 WIPFHSVLAHAR--ACLTHGTTGAVLEAFAAGVPLVLVPHFATEAAPSAERVIELGLGSV 345
Query: 405 LRLD 408
LR D
Sbjct: 346 LRPD 349
>pdb|2BBV|A Chain A, The Refined Three-Dimensional Structure Of An Insect Virus
At 2.8 Angstroms Resolution
pdb|2BBV|B Chain B, The Refined Three-Dimensional Structure Of An Insect Virus
At 2.8 Angstroms Resolution
pdb|2BBV|C Chain C, The Refined Three-Dimensional Structure Of An Insect Virus
At 2.8 Angstroms Resolution
Length = 363
Score = 32.3 bits (72), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 17/64 (26%), Positives = 33/64 (51%), Gaps = 3/64 (4%)
Query: 281 SGSFDVAQVKEIAIGLERSGYNFLWSLRVSSPKDEVSAHRYVTNN-GVFPEGFLERIKGR 339
+G+F ++ A+ G+N ++ +S D+VS+ RY + N G++P L + G
Sbjct: 130 AGTFPISTTTFNAVNFP--GFNSMFGNAAASRSDQVSSFRYASMNVGIYPTSNLMQFAGS 187
Query: 340 GMIW 343
+W
Sbjct: 188 ITVW 191
>pdb|2HJN|A Chain A, Structural And Functional Analysis Of Saccharomyces
Cerevisiae Mob1
Length = 236
Score = 30.8 bits (68), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 30/78 (38%), Gaps = 21/78 (26%)
Query: 278 FGSSGSFDVAQVKEIAIGLERSGYNFLWSLRVSSPKDEVSAHRYVTN------------- 324
+GS F Q I + Y +LW+ + P VSA +YV
Sbjct: 94 YGSITEFCSPQTCPRXIAT--NEYEYLWAFQKGQPPVSVSAPKYVECLXRWCQDQFDDES 151
Query: 325 ------NGVFPEGFLERI 336
G FPEGF++R+
Sbjct: 152 LFPSKVTGTFPEGFIQRV 169
>pdb|1ST8|A Chain A, Crystal Structure Of Fructan 1-Exohydrolase Iia From
Cichorium Intybus
pdb|2ADD|A Chain A, Crystal Structure Of Fructan 1-Exohydrolase Iia From
Cichorium Intybus In Complex With Sucrose
pdb|2ADE|A Chain A, Crystal Structure Of Fructan 1-Exohydrolase Iia From
Cichorium Intybus In Complex With Fructose
pdb|2AEY|A Chain A, Crystal Structure Of Fructan 1-Exohydrolase Iia From
Cichorium Intybus In Complex With 2,5
Dideoxy-2,5-Immino-D-Mannitol
Length = 543
Score = 30.4 bits (67), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 19/74 (25%), Positives = 31/74 (41%), Gaps = 6/74 (8%)
Query: 320 RYVTNNGVFPEGFLERIKGRGMIWGWVPQVEILAHKAIGGFVSHCGWNSILESLWY---G 376
RY + F + K R ++W WVP+ + A G+ G S +LW G
Sbjct: 267 RYDYGQFYASKSFFDDAKNRRVLWAWVPETDSQADDIEKGW---AGLQSFPRALWIDRNG 323
Query: 377 VPIATWPIYAEQQL 390
+ WP+ ++L
Sbjct: 324 KQLIQWPVEEIEEL 337
>pdb|2AEZ|A Chain A, Crystal Structure Of Fructan 1-Exohydrolase Iia (E201q)
From Cichorium Intybus In Complex With 1-Kestose
Length = 543
Score = 30.4 bits (67), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 19/74 (25%), Positives = 31/74 (41%), Gaps = 6/74 (8%)
Query: 320 RYVTNNGVFPEGFLERIKGRGMIWGWVPQVEILAHKAIGGFVSHCGWNSILESLWY---G 376
RY + F + K R ++W WVP+ + A G+ G S +LW G
Sbjct: 267 RYDYGQFYASKSFFDDAKNRRVLWAWVPETDSQADDIEKGW---AGLQSFPRALWIDRNG 323
Query: 377 VPIATWPIYAEQQL 390
+ WP+ ++L
Sbjct: 324 KQLIQWPVEEIEEL 337
>pdb|1H3O|B Chain B, Crystal Structure Of The Human Taf4-Taf12
(Tafii135-Tafii20) Complex
pdb|1H3O|D Chain D, Crystal Structure Of The Human Taf4-Taf12
(Tafii135-Tafii20) Complex
Length = 76
Score = 29.6 bits (65), Expect = 4.2, Method: Composition-based stats.
Identities = 17/51 (33%), Positives = 23/51 (45%), Gaps = 1/51 (1%)
Query: 249 PNPDLDEAQYQKIFQWLDDLAESSVVFLC-FGSSGSFDVAQVKEIAIGLER 298
PN LDE + + Q DD ES V C +VK++ + LER
Sbjct: 20 PNEQLDEDVEEXLLQIADDFIESVVTAACQLARHRKSSTLEVKDVQLHLER 70
>pdb|4F9U|A Chain A, Structure Of Glycosylated Glutaminyl Cyclase From
Drosophila Melanogaster
pdb|4F9U|B Chain B, Structure Of Glycosylated Glutaminyl Cyclase From
Drosophila Melanogaster
pdb|4FWU|A Chain A, Crystal Structure Of Glutaminyl Cyclase From Drosophila
Melanogaster In Space Group I4
Length = 312
Score = 28.9 bits (63), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 29/63 (46%)
Query: 191 NKDGGHATLVKLAQRFKDVDGIIVNTFHELEPYAVNAFSGDLNPPLYTAGPVLHLKSQPN 250
N DG H++LV++ + + + N L + D P L PVLHL + P
Sbjct: 205 NTDGLHSSLVQIEKSLRTAGQLEGNNNMFLSRVSGGLVDDDHRPFLDENVPVLHLVATPF 264
Query: 251 PDL 253
PD+
Sbjct: 265 PDV 267
>pdb|1JCM|P Chain P, Trpc Stability Mutant Containing An Engineered Disulphide
Bridge And In Complex With A Cdrp-Related Substrate
Length = 259
Score = 28.9 bits (63), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 16/52 (30%), Positives = 30/52 (57%), Gaps = 3/52 (5%)
Query: 384 IYAEQQLNAFRMVKELGLALDLRLDYRVGSDLVMAGDIESAVRCLMDGENKI 435
+ +E +N + V+EL + + +GS L+ D+ +AVR ++ GENK+
Sbjct: 211 VISESGINTYAQVRELSHFAN---GFLIGSALMAHDDLHAAVRRVLLGENKV 259
>pdb|1PII|A Chain A, Three-Dimensional Structure Of The Bifunctional Enzyme
Phosphoribosylanthranilate Isomerase:
Indoleglycerolphosphate Synthase From Escherichia Coli
Refined At 2.0 Angstroms Resolution
Length = 452
Score = 28.9 bits (63), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 16/52 (30%), Positives = 29/52 (55%), Gaps = 3/52 (5%)
Query: 384 IYAEQQLNAFRMVKELGLALDLRLDYRVGSDLVMAGDIESAVRCLMDGENKI 435
+ +E +N + V+EL + +GS L+ D+ +AVR ++ GENK+
Sbjct: 211 VISESGINTYAQVRELS---HFANGFLIGSALMAHDDLHAAVRRVLLGENKV 259
>pdb|4F9V|A Chain A, Structure Of C113aC136A MUTANT VARIANT OF GLYCOSYLATED
GLUTAMINYL Cyclase From Drosophila Melanogaster
pdb|4F9V|B Chain B, Structure Of C113aC136A MUTANT VARIANT OF GLYCOSYLATED
GLUTAMINYL Cyclase From Drosophila Melanogaster
Length = 312
Score = 28.5 bits (62), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 29/63 (46%)
Query: 191 NKDGGHATLVKLAQRFKDVDGIIVNTFHELEPYAVNAFSGDLNPPLYTAGPVLHLKSQPN 250
N DG H++LV++ + + + N L + D P L PVLHL + P
Sbjct: 205 NTDGLHSSLVQIEKSLRTAGQLEGNNNMFLSRVSGGLVDDDHRPFLDENVPVLHLVATPF 264
Query: 251 PDL 253
PD+
Sbjct: 265 PDV 267
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.321 0.137 0.412
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,059,024
Number of Sequences: 62578
Number of extensions: 527719
Number of successful extensions: 1314
Number of sequences better than 100.0: 18
Number of HSP's better than 100.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 1276
Number of HSP's gapped (non-prelim): 20
length of query: 468
length of database: 14,973,337
effective HSP length: 102
effective length of query: 366
effective length of database: 8,590,381
effective search space: 3144079446
effective search space used: 3144079446
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 53 (25.0 bits)