Query 045570
Match_columns 468
No_of_seqs 187 out of 1506
Neff 9.9
Searched_HMMs 46136
Date Fri Mar 29 03:24:40 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/045570.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/045570hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02207 UDP-glycosyltransfera 100.0 1.2E-74 2.5E-79 569.1 47.7 456 1-468 1-464 (468)
2 PLN02410 UDP-glucoronosyl/UDP- 100.0 2.8E-73 6.1E-78 560.1 46.0 436 3-468 7-449 (451)
3 PLN02554 UDP-glycosyltransfera 100.0 3.9E-73 8.4E-78 567.2 45.1 458 2-467 1-476 (481)
4 PLN02167 UDP-glycosyltransfera 100.0 7.2E-73 1.6E-77 564.4 46.7 460 1-468 1-471 (475)
5 PLN03015 UDP-glucosyl transfer 100.0 1.2E-71 2.6E-76 545.4 46.5 450 1-467 1-466 (470)
6 PLN00164 glucosyltransferase; 100.0 2E-71 4.3E-76 552.6 45.7 453 1-467 1-471 (480)
7 PLN03004 UDP-glycosyltransfera 100.0 2.6E-71 5.6E-76 543.7 43.1 443 1-458 1-450 (451)
8 PLN02992 coniferyl-alcohol glu 100.0 3.9E-71 8.5E-76 545.0 44.5 443 3-467 5-467 (481)
9 PLN02152 indole-3-acetate beta 100.0 5.5E-71 1.2E-75 542.0 44.5 441 1-467 1-454 (455)
10 PLN02562 UDP-glycosyltransfera 100.0 1.1E-70 2.4E-75 543.4 45.5 430 3-468 6-448 (448)
11 PLN02173 UDP-glucosyl transfer 100.0 1.4E-70 3E-75 538.3 45.4 426 3-468 5-447 (449)
12 PLN02555 limonoid glucosyltran 100.0 2.3E-70 4.9E-75 541.2 44.8 449 3-467 7-467 (480)
13 PLN02863 UDP-glucoronosyl/UDP- 100.0 4E-70 8.7E-75 541.4 44.5 442 2-467 8-469 (477)
14 PLN02534 UDP-glycosyltransfera 100.0 3.4E-69 7.4E-74 533.4 45.0 450 3-467 8-484 (491)
15 PLN02210 UDP-glucosyl transfer 100.0 3.6E-69 7.8E-74 533.1 45.1 431 3-468 8-454 (456)
16 PLN02208 glycosyltransferase f 100.0 1.6E-68 3.4E-73 525.0 41.8 419 1-467 1-437 (442)
17 PLN02448 UDP-glycosyltransfera 100.0 6.6E-68 1.4E-72 527.8 44.1 433 2-467 9-455 (459)
18 PLN02670 transferase, transfer 100.0 1.4E-67 3E-72 519.5 42.3 436 3-467 6-463 (472)
19 PLN02764 glycosyltransferase f 100.0 3.9E-67 8.4E-72 512.1 43.5 421 3-467 5-443 (453)
20 PLN00414 glycosyltransferase f 100.0 3.1E-67 6.8E-72 516.4 42.7 421 3-467 4-438 (446)
21 PLN03007 UDP-glucosyltransfera 100.0 1.8E-66 3.9E-71 520.0 43.7 447 2-467 4-478 (482)
22 PHA03392 egt ecdysteroid UDP-g 100.0 6.6E-46 1.4E-50 372.1 38.4 383 5-449 22-449 (507)
23 PF00201 UDPGT: UDP-glucoronos 100.0 1.2E-47 2.5E-52 391.5 12.7 387 5-449 2-426 (500)
24 TIGR01426 MGT glycosyltransfer 100.0 4.7E-42 1E-46 339.5 31.0 357 9-449 1-376 (392)
25 KOG1192 UDP-glucuronosyl and U 100.0 8.7E-44 1.9E-48 363.2 19.0 400 3-448 5-438 (496)
26 cd03784 GT1_Gtf_like This fami 100.0 8.7E-42 1.9E-46 339.1 24.2 378 4-465 1-399 (401)
27 COG1819 Glycosyl transferases, 100.0 8.1E-39 1.8E-43 312.6 21.7 382 4-466 2-397 (406)
28 PRK12446 undecaprenyldiphospho 99.9 5.1E-24 1.1E-28 205.8 28.8 323 1-441 1-335 (352)
29 COG0707 MurG UDP-N-acetylgluco 99.9 4.1E-20 8.8E-25 176.5 29.4 307 5-430 2-323 (357)
30 PF13528 Glyco_trans_1_3: Glyc 99.9 5E-20 1.1E-24 177.2 25.8 305 5-428 2-317 (318)
31 TIGR00661 MJ1255 conserved hyp 99.8 6E-19 1.3E-23 169.4 25.7 87 337-436 228-318 (321)
32 PRK00726 murG undecaprenyldiph 99.8 5.7E-16 1.2E-20 151.5 27.2 339 4-466 2-354 (357)
33 cd03785 GT1_MurG MurG is an N- 99.7 2.8E-15 6E-20 146.3 27.5 322 5-440 1-332 (350)
34 TIGR00215 lpxB lipid-A-disacch 99.7 1.4E-14 3.1E-19 142.1 22.4 106 348-464 261-383 (385)
35 TIGR01133 murG undecaprenyldip 99.6 4.3E-13 9.3E-18 130.7 28.7 83 347-439 243-328 (348)
36 PRK13609 diacylglycerol glucos 99.6 1E-12 2.2E-17 129.6 28.0 161 270-465 201-367 (380)
37 PRK00025 lpxB lipid-A-disaccha 99.5 4.4E-12 9.5E-17 125.2 22.5 106 348-465 255-373 (380)
38 PRK13608 diacylglycerol glucos 99.5 6.9E-11 1.5E-15 116.7 30.1 161 270-465 201-367 (391)
39 PF04101 Glyco_tran_28_C: Glyc 99.5 7E-15 1.5E-19 127.3 0.6 139 273-435 1-147 (167)
40 PLN02605 monogalactosyldiacylg 99.4 4.6E-10 9.9E-15 110.7 29.6 110 338-464 265-376 (382)
41 TIGR03492 conserved hypothetic 99.4 5.8E-10 1.3E-14 109.7 29.6 171 271-465 205-394 (396)
42 TIGR03590 PseG pseudaminic aci 99.4 1.2E-10 2.6E-15 109.1 23.1 103 272-394 171-278 (279)
43 COG4671 Predicted glycosyl tra 99.3 6.8E-10 1.5E-14 101.8 21.7 332 2-430 8-364 (400)
44 PF03033 Glyco_transf_28: Glyc 99.2 1.2E-11 2.6E-16 103.6 6.5 124 6-144 1-132 (139)
45 cd03814 GT1_like_2 This family 99.2 1.6E-07 3.5E-12 91.4 32.6 157 272-466 197-362 (364)
46 cd03823 GT1_ExpE7_like This fa 99.0 1.3E-06 2.8E-11 84.9 30.2 86 337-438 242-335 (359)
47 PLN02871 UDP-sulfoquinovose:DA 99.0 1.9E-06 4.1E-11 87.4 31.4 131 273-438 264-406 (465)
48 cd03800 GT1_Sucrose_synthase T 99.0 2E-06 4.3E-11 85.2 30.7 84 338-437 283-373 (398)
49 PRK05749 3-deoxy-D-manno-octul 98.9 3.6E-06 7.7E-11 84.4 32.1 87 339-439 303-395 (425)
50 cd03794 GT1_wbuB_like This fam 98.9 9.7E-07 2.1E-11 86.5 25.7 140 271-439 219-372 (394)
51 cd03817 GT1_UGDG_like This fam 98.9 1.5E-05 3.3E-10 77.6 33.1 81 337-434 258-345 (374)
52 cd03801 GT1_YqgM_like This fam 98.9 1.7E-05 3.8E-10 76.7 32.4 111 336-466 254-372 (374)
53 cd03818 GT1_ExpC_like This fam 98.8 2.9E-05 6.2E-10 77.1 33.9 87 338-438 281-372 (396)
54 cd03808 GT1_cap1E_like This fa 98.8 2.2E-05 4.9E-10 75.8 30.9 139 271-438 187-335 (359)
55 PRK10307 putative glycosyl tra 98.8 6.9E-05 1.5E-09 74.8 33.9 85 338-436 284-377 (412)
56 cd04962 GT1_like_5 This family 98.7 4.9E-05 1.1E-09 74.5 32.0 86 337-438 252-342 (371)
57 cd03816 GT1_ALG1_like This fam 98.7 6.4E-05 1.4E-09 75.1 31.9 76 339-432 295-381 (415)
58 TIGR00236 wecB UDP-N-acetylglu 98.7 8.6E-06 1.9E-10 79.9 24.8 106 338-465 255-363 (365)
59 cd03820 GT1_amsD_like This fam 98.7 4.8E-05 1E-09 73.1 29.7 90 338-443 235-330 (348)
60 COG3980 spsG Spore coat polysa 98.7 1.2E-05 2.5E-10 72.2 22.2 141 272-441 159-302 (318)
61 cd03786 GT1_UDP-GlcNAc_2-Epime 98.7 5.2E-06 1.1E-10 81.4 22.7 140 270-438 197-343 (363)
62 cd03795 GT1_like_4 This family 98.7 3.7E-05 8E-10 74.8 27.6 134 272-437 191-337 (357)
63 TIGR02472 sucr_P_syn_N sucrose 98.6 0.00012 2.6E-09 73.6 31.9 111 337-466 316-437 (439)
64 cd03825 GT1_wcfI_like This fam 98.6 6.1E-05 1.3E-09 73.5 29.1 84 337-436 243-334 (365)
65 TIGR03449 mycothiol_MshA UDP-N 98.6 0.00038 8.3E-09 69.3 34.2 86 338-439 283-375 (405)
66 cd03798 GT1_wlbH_like This fam 98.6 0.00024 5.2E-09 68.9 31.9 82 337-434 258-346 (377)
67 cd03821 GT1_Bme6_like This fam 98.6 0.00039 8.5E-09 67.5 32.8 84 337-438 261-351 (375)
68 cd03799 GT1_amsK_like This is 98.5 0.0001 2.3E-09 71.5 26.8 83 337-435 235-330 (355)
69 cd03822 GT1_ecORF704_like This 98.5 0.00032 6.8E-09 68.3 28.9 108 337-465 246-363 (366)
70 PF04007 DUF354: Protein of un 98.4 0.0004 8.7E-09 66.2 27.4 295 12-430 8-309 (335)
71 TIGR02468 sucrsPsyn_pln sucros 98.4 0.0019 4E-08 69.9 34.5 90 337-440 547-645 (1050)
72 KOG3349 Predicted glycosyltran 98.4 1.7E-06 3.6E-11 69.7 8.7 111 272-401 4-128 (170)
73 PRK14089 ipid-A-disaccharide s 98.4 3.6E-05 7.7E-10 73.9 19.5 92 348-445 229-331 (347)
74 PRK01021 lpxB lipid-A-disaccha 98.4 0.00052 1.1E-08 69.5 28.4 199 233-458 380-597 (608)
75 cd03796 GT1_PIG-A_like This fa 98.4 0.0009 1.9E-08 66.5 30.2 77 337-430 249-332 (398)
76 cd04951 GT1_WbdM_like This fam 98.4 0.00054 1.2E-08 66.7 28.2 87 338-441 245-336 (360)
77 cd03805 GT1_ALG2_like This fam 98.4 0.0006 1.3E-08 67.4 28.7 83 337-436 279-368 (392)
78 cd05844 GT1_like_7 Glycosyltra 98.4 0.00037 8.1E-09 68.2 26.9 84 337-436 244-340 (367)
79 COG1519 KdtA 3-deoxy-D-manno-o 98.4 0.0012 2.6E-08 63.5 28.0 87 339-438 301-392 (419)
80 cd03811 GT1_WabH_like This fam 98.3 0.00061 1.3E-08 65.4 26.0 87 337-439 245-339 (353)
81 cd03807 GT1_WbnK_like This fam 98.2 0.0039 8.4E-08 60.2 30.1 107 338-465 251-362 (365)
82 cd04955 GT1_like_6 This family 98.2 0.0055 1.2E-07 59.6 30.3 107 337-466 247-361 (363)
83 cd03819 GT1_WavL_like This fam 98.2 0.0043 9.3E-08 60.2 29.4 139 272-436 185-335 (355)
84 TIGR02470 sucr_synth sucrose s 98.2 0.01 2.2E-07 62.8 33.2 89 337-438 618-719 (784)
85 cd03802 GT1_AviGT4_like This f 98.2 0.0015 3.3E-08 62.8 25.7 127 274-430 173-307 (335)
86 PF02684 LpxB: Lipid-A-disacch 98.1 0.00026 5.7E-09 68.4 18.7 196 234-459 153-367 (373)
87 cd03812 GT1_CapH_like This fam 98.1 0.008 1.7E-07 58.4 29.2 86 337-439 248-338 (358)
88 TIGR02149 glgA_Coryne glycogen 98.0 0.017 3.8E-07 56.9 29.8 87 340-436 262-356 (388)
89 PF02350 Epimerase_2: UDP-N-ac 97.9 0.0007 1.5E-08 65.5 17.0 136 269-438 178-324 (346)
90 TIGR03568 NeuC_NnaA UDP-N-acet 97.8 0.015 3.2E-07 57.0 24.9 130 271-430 201-338 (365)
91 cd04946 GT1_AmsK_like This fam 97.8 0.0011 2.4E-08 66.0 16.8 111 338-464 289-406 (407)
92 PLN00142 sucrose synthase 97.7 0.083 1.8E-06 56.2 30.1 85 338-438 642-742 (815)
93 PLN02275 transferase, transfer 97.7 0.066 1.4E-06 52.6 28.8 75 338-429 286-371 (371)
94 COG0763 LpxB Lipid A disacchar 97.7 0.017 3.6E-07 55.1 21.6 207 232-467 155-379 (381)
95 cd03806 GT1_ALG11_like This fa 97.7 0.021 4.6E-07 57.0 23.9 82 337-436 304-397 (419)
96 COG0381 WecB UDP-N-acetylgluco 97.6 0.0061 1.3E-07 58.2 18.2 137 271-441 204-350 (383)
97 PRK15179 Vi polysaccharide bio 97.6 0.13 2.9E-06 54.3 32.0 93 337-442 573-673 (694)
98 PLN02949 transferase, transfer 97.6 0.1 2.2E-06 52.7 30.0 85 337-434 334-425 (463)
99 cd03792 GT1_Trehalose_phosphor 97.6 0.093 2E-06 51.5 30.9 108 337-465 251-367 (372)
100 PF13844 Glyco_transf_41: Glyc 97.6 0.0023 5.1E-08 63.3 15.1 145 270-438 283-436 (468)
101 PRK15427 colanic acid biosynth 97.6 0.0049 1.1E-07 61.3 17.8 111 337-465 278-401 (406)
102 cd03804 GT1_wbaZ_like This fam 97.5 0.00053 1.2E-08 66.8 10.3 133 274-439 197-334 (351)
103 PRK00654 glgA glycogen synthas 97.5 0.096 2.1E-06 53.2 26.5 83 337-430 336-427 (466)
104 PF00534 Glycos_transf_1: Glyc 97.5 0.002 4.4E-08 55.5 12.4 89 336-440 71-166 (172)
105 PRK15484 lipopolysaccharide 1, 97.5 0.0079 1.7E-07 59.3 17.7 85 336-435 255-347 (380)
106 COG5017 Uncharacterized conser 97.4 0.0022 4.8E-08 51.1 10.2 107 274-405 2-121 (161)
107 PLN02846 digalactosyldiacylgly 97.3 0.24 5.2E-06 49.7 25.5 72 342-431 288-363 (462)
108 PRK09922 UDP-D-galactose:(gluc 97.2 0.0097 2.1E-07 58.2 14.3 133 273-434 181-326 (359)
109 PF13692 Glyco_trans_1_4: Glyc 97.1 0.0031 6.8E-08 51.8 9.1 79 337-430 52-134 (135)
110 cd03809 GT1_mtfB_like This fam 97.0 0.019 4.1E-07 55.6 15.0 91 336-444 251-348 (365)
111 TIGR03087 stp1 sugar transfera 96.9 0.044 9.6E-07 54.4 16.6 107 338-465 280-392 (397)
112 cd03813 GT1_like_3 This family 96.9 0.055 1.2E-06 55.1 17.5 88 337-439 353-449 (475)
113 PRK09814 beta-1,6-galactofuran 96.9 0.008 1.7E-07 58.1 10.5 111 337-466 206-332 (333)
114 TIGR03088 stp2 sugar transfera 96.8 0.066 1.4E-06 52.5 16.9 108 338-464 255-367 (374)
115 TIGR02918 accessory Sec system 96.5 0.11 2.3E-06 53.2 15.9 95 337-442 375-480 (500)
116 cd04949 GT1_gtfA_like This fam 96.4 0.065 1.4E-06 52.5 13.6 85 337-434 260-347 (372)
117 PHA01633 putative glycosyl tra 96.2 0.23 4.9E-06 47.7 15.4 83 337-430 200-306 (335)
118 PLN02501 digalactosyldiacylgly 96.1 2.3 5E-05 44.6 25.5 76 340-434 603-683 (794)
119 cd01635 Glycosyltransferase_GT 96.1 0.97 2.1E-05 40.1 18.8 49 338-388 161-217 (229)
120 KOG4626 O-linked N-acetylgluco 95.9 0.074 1.6E-06 53.5 10.5 124 271-406 758-888 (966)
121 PRK14098 glycogen synthase; Pr 95.8 0.21 4.5E-06 51.0 14.1 83 336-429 360-449 (489)
122 cd04950 GT1_like_1 Glycosyltra 95.7 0.33 7E-06 47.7 14.6 77 338-431 254-340 (373)
123 PRK10017 colanic acid biosynth 95.5 0.64 1.4E-05 46.3 15.8 182 261-467 224-422 (426)
124 TIGR02095 glgA glycogen/starch 95.4 0.35 7.5E-06 49.2 14.0 133 272-430 291-436 (473)
125 cd03791 GT1_Glycogen_synthase_ 95.3 0.29 6.3E-06 49.8 13.1 133 272-430 296-441 (476)
126 PRK15490 Vi polysaccharide bio 95.3 0.76 1.6E-05 47.0 15.5 63 337-406 454-521 (578)
127 PF06722 DUF1205: Protein of u 94.8 0.05 1.1E-06 41.7 4.3 53 258-310 27-84 (97)
128 PF13524 Glyco_trans_1_2: Glyc 94.3 0.52 1.1E-05 35.6 9.2 82 363-464 9-91 (92)
129 COG3914 Spy Predicted O-linked 94.3 0.55 1.2E-05 47.2 11.3 132 269-425 427-572 (620)
130 PF06258 Mito_fiss_Elm1: Mitoc 93.2 4 8.6E-05 38.8 14.8 39 347-386 221-259 (311)
131 PF13579 Glyco_trans_4_4: Glyc 92.8 0.26 5.5E-06 41.2 5.7 95 20-140 7-103 (160)
132 PRK10125 putative glycosyl tra 91.6 4.9 0.00011 39.9 13.9 61 349-425 301-365 (405)
133 PHA01630 putative group 1 glyc 90.8 16 0.00034 35.2 16.2 107 344-465 196-326 (331)
134 PLN02316 synthase/transferase 90.4 14 0.0003 41.1 16.7 112 338-462 900-1026(1036)
135 PLN02939 transferase, transfer 90.2 11 0.00023 41.3 15.3 84 337-430 836-930 (977)
136 PF13477 Glyco_trans_4_2: Glyc 89.9 2 4.3E-05 35.1 8.1 99 6-138 2-104 (139)
137 COG4370 Uncharacterized protei 89.6 1.8 3.9E-05 40.1 7.8 93 338-443 294-390 (412)
138 TIGR02400 trehalose_OtsA alpha 89.5 3.3 7.2E-05 41.8 10.7 101 344-467 342-454 (456)
139 cd03789 GT1_LPS_heptosyltransf 89.2 19 0.00041 33.6 17.8 38 5-42 1-38 (279)
140 COG1817 Uncharacterized protei 88.5 7.9 0.00017 36.2 11.2 112 8-144 4-115 (346)
141 cd03788 GT1_TPS Trehalose-6-Ph 86.8 2.9 6.3E-05 42.3 8.4 102 343-467 346-459 (460)
142 TIGR03713 acc_sec_asp1 accesso 86.4 3.7 8.1E-05 42.1 8.9 75 338-433 409-489 (519)
143 PRK02261 methylaspartate mutas 86.0 1.4 3E-05 36.3 4.6 40 1-42 1-40 (137)
144 PF12000 Glyco_trans_4_3: Gkyc 82.3 15 0.00032 31.5 9.4 43 97-140 52-95 (171)
145 PF04464 Glyphos_transf: CDP-G 82.2 1.6 3.4E-05 42.8 4.0 116 338-464 252-368 (369)
146 PF07355 GRDB: Glycine/sarcosi 81.7 13 0.00029 35.4 9.6 81 11-140 28-118 (349)
147 PF13439 Glyco_transf_4: Glyco 80.4 14 0.00031 30.9 9.1 28 13-42 11-38 (177)
148 PRK14099 glycogen synthase; Pr 80.1 45 0.00098 34.0 13.9 38 1-42 1-46 (485)
149 PF01975 SurE: Survival protei 77.9 9.1 0.0002 33.7 6.9 25 18-44 14-38 (196)
150 COG2109 BtuR ATP:corrinoid ade 75.0 56 0.0012 28.4 10.6 104 2-123 27-133 (198)
151 COG0859 RfaF ADP-heptose:LPS h 73.8 88 0.0019 30.1 14.3 38 5-42 3-40 (334)
152 COG0496 SurE Predicted acid ph 73.0 20 0.00044 32.6 7.9 22 20-44 16-37 (252)
153 PLN03063 alpha,alpha-trehalose 72.7 13 0.00028 40.5 7.9 95 350-466 371-474 (797)
154 TIGR02195 heptsyl_trn_II lipop 71.3 98 0.0021 29.6 19.4 38 5-42 1-38 (334)
155 PF08660 Alg14: Oligosaccharid 70.1 60 0.0013 27.8 10.0 20 8-27 2-21 (170)
156 COG0438 RfaG Glycosyltransfera 65.7 1.1E+02 0.0025 28.2 16.6 80 338-433 257-343 (381)
157 PRK03359 putative electron tra 64.7 72 0.0016 29.4 9.9 30 112-141 112-147 (256)
158 PRK02797 4-alpha-L-fucosyltran 64.1 28 0.00061 32.8 7.1 81 338-429 206-292 (322)
159 PRK13932 stationary phase surv 63.9 71 0.0015 29.4 9.6 38 3-44 5-42 (257)
160 TIGR00087 surE 5'/3'-nucleotid 63.6 95 0.0021 28.4 10.4 22 20-44 16-37 (244)
161 PF10083 DUF2321: Uncharacteri 63.3 13 0.00028 30.8 4.2 69 382-464 78-146 (158)
162 PRK13935 stationary phase surv 62.9 90 0.002 28.7 10.1 22 20-44 16-37 (253)
163 PRK05986 cob(I)alamin adenolsy 62.8 1.1E+02 0.0023 26.9 11.4 106 1-123 20-126 (191)
164 PRK13933 stationary phase surv 61.7 1.1E+02 0.0024 28.1 10.4 22 20-44 16-37 (253)
165 COG2086 FixA Electron transfer 61.4 79 0.0017 29.2 9.4 98 21-141 43-146 (260)
166 TIGR02919 accessory Sec system 61.4 25 0.00055 35.3 6.8 88 338-441 328-421 (438)
167 PRK12342 hypothetical protein; 61.3 81 0.0017 29.0 9.5 30 112-141 109-144 (254)
168 cd03793 GT1_Glycogen_synthase_ 59.8 54 0.0012 34.0 8.8 80 347-430 467-551 (590)
169 PF02572 CobA_CobO_BtuR: ATP:c 59.5 76 0.0017 27.2 8.5 104 3-123 3-107 (172)
170 cd02067 B12-binding B12 bindin 59.0 13 0.00027 29.6 3.6 36 5-42 1-36 (119)
171 PF05159 Capsule_synth: Capsul 58.8 72 0.0016 29.5 9.1 42 340-384 185-226 (269)
172 TIGR02193 heptsyl_trn_I lipopo 57.9 36 0.00077 32.4 7.1 135 271-429 179-319 (319)
173 PRK10916 ADP-heptose:LPS hepto 57.6 1.8E+02 0.004 27.9 21.5 38 5-42 2-39 (348)
174 COG1618 Predicted nucleotide k 57.1 38 0.00082 28.7 5.9 38 3-42 5-43 (179)
175 COG0801 FolK 7,8-dihydro-6-hyd 56.5 22 0.00047 30.0 4.6 35 273-307 3-37 (160)
176 cd03791 GT1_Glycogen_synthase_ 55.8 68 0.0015 32.5 9.2 21 20-42 22-42 (476)
177 PRK00346 surE 5'(3')-nucleotid 55.6 1.1E+02 0.0023 28.2 9.2 22 20-44 16-37 (250)
178 PF04127 DFP: DNA / pantothena 55.5 7.2 0.00016 33.9 1.7 39 2-42 2-52 (185)
179 COG0003 ArsA Predicted ATPase 54.8 1.3E+02 0.0027 28.9 10.0 41 4-46 2-43 (322)
180 PF02441 Flavoprotein: Flavopr 54.0 17 0.00038 29.4 3.6 36 4-42 1-36 (129)
181 PF04413 Glycos_transf_N: 3-De 53.2 27 0.00059 30.4 4.9 98 7-140 24-125 (186)
182 PF07429 Glyco_transf_56: 4-al 51.9 56 0.0012 31.4 6.9 81 339-430 246-332 (360)
183 cd07025 Peptidase_S66 LD-Carbo 51.6 28 0.0006 32.7 5.0 75 283-385 45-121 (282)
184 COG2185 Sbm Methylmalonyl-CoA 50.7 26 0.00055 28.9 4.0 37 1-39 10-46 (143)
185 COG2327 WcaK Polysaccharide py 50.4 54 0.0012 32.1 6.8 77 349-438 280-357 (385)
186 PF08766 DEK_C: DEK C terminal 50.0 47 0.001 22.1 4.6 50 417-466 1-51 (54)
187 TIGR02201 heptsyl_trn_III lipo 49.6 93 0.002 29.9 8.6 106 262-382 171-285 (344)
188 PLN02470 acetolactate synthase 48.1 2E+02 0.0043 30.2 11.3 92 277-383 2-109 (585)
189 PRK14501 putative bifunctional 47.9 46 0.00099 36.0 6.6 107 342-467 346-460 (726)
190 PF05225 HTH_psq: helix-turn-h 47.7 27 0.00058 22.4 3.0 26 417-442 1-26 (45)
191 PRK14099 glycogen synthase; Pr 47.7 31 0.00066 35.3 5.0 89 338-438 350-453 (485)
192 PRK08305 spoVFB dipicolinate s 47.5 23 0.00051 31.0 3.6 39 2-42 4-42 (196)
193 cd01840 SGNH_hydrolase_yrhL_li 47.2 57 0.0012 27.0 5.9 38 270-308 50-87 (150)
194 TIGR00715 precor6x_red precorr 45.8 69 0.0015 29.5 6.6 15 20-34 12-26 (256)
195 PRK13934 stationary phase surv 45.6 2.2E+02 0.0047 26.5 9.6 23 18-43 14-36 (266)
196 PRK09620 hypothetical protein; 44.4 33 0.00072 31.0 4.2 40 1-42 1-52 (229)
197 PF02310 B12-binding: B12 bind 43.6 41 0.00089 26.5 4.3 36 4-41 1-36 (121)
198 cd07062 Peptidase_S66_mccF_lik 42.9 42 0.0009 32.0 4.8 28 283-310 49-76 (308)
199 PF01075 Glyco_transf_9: Glyco 42.8 63 0.0014 29.2 6.0 98 270-382 104-208 (247)
200 PF02951 GSH-S_N: Prokaryotic 42.7 39 0.00083 27.0 3.8 36 5-42 2-40 (119)
201 PF00731 AIRC: AIR carboxylase 42.4 2E+02 0.0044 24.0 12.6 139 274-449 3-149 (150)
202 COG2159 Predicted metal-depend 41.7 1.6E+02 0.0036 27.7 8.6 111 236-372 98-210 (293)
203 PRK10422 lipopolysaccharide co 41.0 3.4E+02 0.0073 26.2 21.6 40 3-42 5-44 (352)
204 PRK07414 cob(I)yrinic acid a,c 40.4 2.4E+02 0.0053 24.3 10.8 36 3-40 21-56 (178)
205 cd07038 TPP_PYR_PDC_IPDC_like 40.2 60 0.0013 27.5 4.9 28 357-384 60-93 (162)
206 KOG0853 Glycosyltransferase [C 39.4 28 0.0006 35.2 3.1 67 362-441 376-442 (495)
207 PF05693 Glycogen_syn: Glycoge 39.4 54 0.0012 34.0 5.1 100 335-445 438-565 (633)
208 COG1663 LpxK Tetraacyldisaccha 37.5 1E+02 0.0022 29.6 6.3 34 7-42 53-86 (336)
209 PRK13982 bifunctional SbtC-lik 37.2 49 0.0011 33.5 4.5 39 2-42 255-305 (475)
210 cd01974 Nitrogenase_MoFe_beta 37.1 2.2E+02 0.0047 28.6 9.2 26 112-140 377-402 (435)
211 PLN02859 glutamine-tRNA ligase 36.3 57 0.0012 35.1 4.9 63 394-467 108-178 (788)
212 PRK05595 replicative DNA helic 36.3 1.4E+02 0.003 30.1 7.6 36 5-42 203-239 (444)
213 PF06506 PrpR_N: Propionate ca 35.7 58 0.0013 28.0 4.2 31 355-386 33-63 (176)
214 PRK06321 replicative DNA helic 35.5 1.5E+02 0.0032 30.2 7.7 36 5-42 228-264 (472)
215 cd07039 TPP_PYR_POX Pyrimidine 35.3 1.7E+02 0.0037 24.7 7.0 26 358-383 65-96 (164)
216 COG0297 GlgA Glycogen synthase 35.2 1.5E+02 0.0033 30.2 7.6 114 335-463 346-471 (487)
217 PRK10964 ADP-heptose:LPS hepto 35.1 1.8E+02 0.0039 27.7 8.0 38 5-42 2-39 (322)
218 COG2987 HutU Urocanate hydrata 35.1 89 0.0019 31.0 5.6 40 341-380 466-507 (561)
219 COG3340 PepE Peptidase E [Amin 35.1 3.3E+02 0.0072 24.3 9.0 48 258-306 21-68 (224)
220 TIGR02398 gluc_glyc_Psyn gluco 34.9 3.2E+02 0.0069 28.0 9.8 105 340-467 364-480 (487)
221 TIGR02990 ectoine_eutA ectoine 34.5 1.2E+02 0.0026 27.7 6.2 101 17-138 105-211 (239)
222 PRK01231 ppnK inorganic polyph 34.2 2.1E+02 0.0046 27.0 8.0 53 354-431 62-118 (295)
223 COG1797 CobB Cobyrinic acid a, 33.8 56 0.0012 32.4 4.1 33 6-40 3-36 (451)
224 PRK14092 2-amino-4-hydroxy-6-h 33.8 82 0.0018 26.8 4.7 30 270-299 6-35 (163)
225 cd00561 CobA_CobO_BtuR ATP:cor 33.6 3E+02 0.0064 23.3 11.5 101 4-123 3-106 (159)
226 PRK07313 phosphopantothenoylcy 33.5 41 0.0009 29.1 2.9 37 1-42 1-37 (182)
227 cd02070 corrinoid_protein_B12- 33.0 75 0.0016 28.0 4.6 38 3-42 82-119 (201)
228 TIGR00708 cobA cob(I)alamin ad 32.9 3.2E+02 0.0069 23.5 9.3 39 3-41 5-44 (173)
229 TIGR02095 glgA glycogen/starch 32.4 66 0.0014 32.6 4.7 37 5-43 2-44 (473)
230 PRK08760 replicative DNA helic 31.9 2.4E+02 0.0051 28.8 8.5 37 5-43 231-268 (476)
231 PRK05632 phosphate acetyltrans 31.6 6E+02 0.013 27.3 11.8 38 1-41 1-39 (684)
232 PRK06270 homoserine dehydrogen 31.6 3.9E+02 0.0085 25.8 9.6 58 347-405 80-149 (341)
233 TIGR02015 BchY chlorophyllide 31.3 4.7E+02 0.01 26.2 10.3 26 111-139 354-379 (422)
234 cd01980 Chlide_reductase_Y Chl 31.2 3.5E+02 0.0075 27.0 9.4 25 112-139 350-374 (416)
235 PRK00784 cobyric acid synthase 30.9 3.7E+02 0.0079 27.5 9.7 35 5-41 4-39 (488)
236 PF07894 DUF1669: Protein of u 30.0 82 0.0018 29.4 4.3 47 94-141 131-182 (284)
237 PF06925 MGDG_synth: Monogalac 29.6 1.6E+02 0.0034 24.9 5.9 24 16-39 1-25 (169)
238 PF12146 Hydrolase_4: Putative 29.3 92 0.002 22.6 3.8 30 4-33 16-45 (79)
239 PRK04940 hypothetical protein; 29.0 1.4E+02 0.003 25.8 5.3 32 112-143 60-92 (180)
240 PRK13886 conjugal transfer pro 28.9 1E+02 0.0022 28.1 4.7 40 1-42 1-40 (241)
241 PRK09165 replicative DNA helic 28.3 2.9E+02 0.0062 28.4 8.4 35 6-42 220-269 (497)
242 cd03412 CbiK_N Anaerobic cobal 28.0 1.2E+02 0.0025 24.5 4.5 37 272-308 2-40 (127)
243 COG3660 Predicted nucleoside-d 27.9 5E+02 0.011 24.2 11.1 37 344-382 234-271 (329)
244 TIGR01470 cysG_Nterm siroheme 27.6 4.3E+02 0.0093 23.3 10.9 147 271-449 10-165 (205)
245 PLN02929 NADH kinase 27.6 82 0.0018 29.8 4.0 66 353-431 63-137 (301)
246 COG1703 ArgK Putative periplas 27.4 1.2E+02 0.0026 28.6 4.9 36 4-41 52-87 (323)
247 PRK03372 ppnK inorganic polyph 27.2 1.3E+02 0.0028 28.6 5.3 54 353-431 71-128 (306)
248 PRK04539 ppnK inorganic polyph 26.6 1.7E+02 0.0037 27.6 6.0 54 353-431 67-124 (296)
249 PRK07710 acetolactate synthase 26.6 3.5E+02 0.0076 28.3 9.0 26 358-383 80-111 (571)
250 PRK15062 hydrogenase isoenzyme 25.8 3.1E+02 0.0068 26.6 7.5 41 263-304 123-163 (364)
251 TIGR00725 conserved hypothetic 25.6 4.1E+02 0.0088 22.4 9.1 37 347-384 83-123 (159)
252 TIGR02370 pyl_corrinoid methyl 25.3 1.2E+02 0.0025 26.7 4.4 38 3-42 84-121 (197)
253 KOG0081 GTPase Rab27, small G 25.1 1.6E+02 0.0034 24.8 4.6 42 97-138 108-160 (219)
254 PF01995 DUF128: Domain of unk 25.0 2.6E+02 0.0056 25.4 6.5 80 270-383 144-223 (236)
255 PRK06249 2-dehydropantoate 2-r 25.0 81 0.0018 30.0 3.6 35 1-42 3-37 (313)
256 PRK02649 ppnK inorganic polyph 25.0 1.2E+02 0.0026 28.8 4.6 54 353-431 67-124 (305)
257 KOG2941 Beta-1,4-mannosyltrans 24.8 6.5E+02 0.014 24.5 10.8 61 2-71 11-71 (444)
258 PRK03378 ppnK inorganic polyph 24.8 1.2E+02 0.0026 28.6 4.6 56 351-431 60-119 (292)
259 PRK07206 hypothetical protein; 24.7 2.1E+02 0.0045 28.4 6.7 34 1-42 1-34 (416)
260 cd07035 TPP_PYR_POX_like Pyrim 24.6 2.1E+02 0.0047 23.5 5.8 26 359-384 62-93 (155)
261 TIGR00665 DnaB replicative DNA 24.3 5.3E+02 0.011 25.7 9.5 39 5-45 197-236 (434)
262 TIGR02852 spore_dpaB dipicolin 24.2 83 0.0018 27.4 3.2 36 5-42 2-37 (187)
263 PRK11253 ldcA L,D-carboxypepti 24.2 1.7E+02 0.0038 27.7 5.6 28 282-310 47-76 (305)
264 TIGR02655 circ_KaiC circadian 24.1 7.3E+02 0.016 25.3 10.5 40 5-46 265-304 (484)
265 PRK06029 3-octaprenyl-4-hydrox 23.9 85 0.0019 27.3 3.2 37 1-42 1-38 (185)
266 PRK08322 acetolactate synthase 23.9 4.3E+02 0.0094 27.3 9.1 27 357-383 64-96 (547)
267 KOG2941 Beta-1,4-mannosyltrans 23.7 6.9E+02 0.015 24.3 11.6 90 338-442 318-423 (444)
268 PRK06732 phosphopantothenate-- 23.6 95 0.0021 28.0 3.6 36 5-42 2-49 (229)
269 PRK14569 D-alanyl-alanine synt 23.5 1.4E+02 0.0031 28.1 4.9 38 1-40 1-42 (296)
270 cd01968 Nitrogenase_NifE_I Nit 23.4 6.8E+02 0.015 24.8 9.9 24 112-138 356-379 (410)
271 TIGR03087 stp1 sugar transfera 23.2 1.2E+02 0.0025 29.9 4.5 28 12-42 12-39 (397)
272 PRK05282 (alpha)-aspartyl dipe 23.2 5.7E+02 0.012 23.2 8.7 47 258-306 21-67 (233)
273 cd03466 Nitrogenase_NifN_2 Nit 23.0 6.9E+02 0.015 25.0 10.0 25 112-139 372-396 (429)
274 COG1484 DnaC DNA replication p 23.0 1.1E+02 0.0024 28.1 4.0 37 4-42 106-142 (254)
275 PF08323 Glyco_transf_5: Starc 22.8 64 0.0014 29.5 2.3 21 20-42 22-42 (245)
276 cd02071 MM_CoA_mut_B12_BD meth 22.8 1.2E+02 0.0026 24.1 3.7 36 5-42 1-36 (122)
277 PRK07773 replicative DNA helic 22.8 4.1E+02 0.009 29.6 8.9 37 6-44 220-257 (886)
278 PRK01175 phosphoribosylformylg 22.8 1.8E+02 0.0039 26.9 5.3 36 1-41 1-36 (261)
279 KOG3062 RNA polymerase II elon 22.7 1.8E+02 0.0038 26.3 4.8 38 5-42 3-40 (281)
280 COG2210 Peroxiredoxin family p 22.6 1.6E+02 0.0035 24.1 4.2 39 1-41 1-39 (137)
281 PRK05636 replicative DNA helic 22.4 1.5E+02 0.0033 30.4 5.2 36 5-42 267-303 (505)
282 PRK07952 DNA replication prote 22.4 4E+02 0.0086 24.3 7.4 35 5-41 101-135 (244)
283 PRK13604 luxD acyl transferase 22.3 1.5E+02 0.0033 28.1 4.7 30 4-33 37-66 (307)
284 PF02585 PIG-L: GlcNAc-PI de-N 22.2 2.3E+02 0.005 22.5 5.3 20 22-41 16-35 (128)
285 PRK04885 ppnK inorganic polyph 22.1 78 0.0017 29.3 2.8 28 354-383 35-68 (265)
286 cd07037 TPP_PYR_MenD Pyrimidin 22.0 76 0.0017 26.9 2.5 25 359-383 63-93 (162)
287 PF02016 Peptidase_S66: LD-car 22.0 64 0.0014 30.3 2.2 28 283-310 45-72 (284)
288 PRK05647 purN phosphoribosylgl 21.6 5.6E+02 0.012 22.5 9.7 36 1-41 1-36 (200)
289 PF08897 DUF1841: Domain of un 21.6 64 0.0014 26.4 1.8 19 11-29 56-74 (137)
290 COG4088 Predicted nucleotide k 21.5 1.2E+02 0.0026 27.0 3.5 34 6-41 4-37 (261)
291 cd01977 Nitrogenase_VFe_alpha 21.4 6.5E+02 0.014 25.0 9.4 25 112-139 358-382 (415)
292 PLN02935 Bifunctional NADH kin 21.3 1.3E+02 0.0028 30.6 4.3 54 353-431 261-318 (508)
293 TIGR01498 folK 2-amino-4-hydro 21.1 94 0.002 25.1 2.7 29 274-302 1-29 (127)
294 KOG3339 Predicted glycosyltran 21.0 3.1E+02 0.0068 23.8 5.7 25 6-30 40-64 (211)
295 TIGR01283 nifE nitrogenase mol 20.8 8.7E+02 0.019 24.5 10.5 25 112-139 395-419 (456)
296 PRK12475 thiamine/molybdopteri 20.7 5.4E+02 0.012 24.8 8.3 34 2-41 23-56 (338)
297 cd02069 methionine_synthase_B1 20.5 1.6E+02 0.0036 26.2 4.4 38 3-42 88-125 (213)
298 cd01832 SGNH_hydrolase_like_1 20.2 3.2E+02 0.0068 23.1 6.2 36 273-308 70-113 (185)
299 COG2894 MinD Septum formation 20.2 1.7E+02 0.0037 26.4 4.2 35 6-42 4-40 (272)
300 PRK04761 ppnK inorganic polyph 20.1 90 0.002 28.6 2.7 28 355-384 26-57 (246)
No 1
>PLN02207 UDP-glycosyltransferase
Probab=100.00 E-value=1.2e-74 Score=569.09 Aligned_cols=456 Identities=52% Similarity=0.924 Sum_probs=350.3
Q ss_pred CCCcEEEEEcCCCCCChHHHHHHHHHHHhCCCCeEEEEEecCCCCChhhhhhhcccCCCCCCeEEEeCCCCCC-CCCCCc
Q 045570 1 MKKAELIFVPSPGIGHLVSTLEFAKHLTDRDDRISVTILSMKLAVAPWVDAYTKSLTDSQPRICVIDLPPVDP-PLPDVL 79 (468)
Q Consensus 1 m~k~~i~~~~~p~~GH~~P~l~La~~L~~rGH~~~Vt~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~ 79 (468)
|+|+||+++|+|++||++||++||+.|+.+|-.+.||+++++.+++......+++.....++++|..+|+... +....
T Consensus 1 ~~~~hvv~~P~p~qGHi~P~l~lA~~La~~gg~~~vT~~~t~~~~~~~~~~~~~~~~~~~~~i~~~~lp~~~~~~~~~~- 79 (468)
T PLN02207 1 MRNAELIFIPTPTVGHLVPFLEFARRLIEQDDRIRITILLMKLQGQSHLDTYVKSIASSQPFVRFIDVPELEEKPTLGG- 79 (468)
T ss_pred CCCcEEEEeCCcchhhHHHHHHHHHHHHhCCCCeEEEEEEcCCCcchhhHHhhhhccCCCCCeEEEEeCCCCCCCcccc-
Confidence 8899999999999999999999999999997113499999987654323333333222223699999996432 11111
Q ss_pred CCChHHHHHHHHHhhchhHHHHHHhhhccC--C-CCccEEEEcCCcchHHHHHHHcCCCeEEEeCchhHHHHHHhhhhcc
Q 045570 80 KKSPEYFISLVVESHLPNVKNIVSSRSNSG--S-LQVTGLVLDFFCVSMVDIAKELSLPSYMFLTSNMGFLRLMLYLPTR 156 (468)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~--~-~~~D~vv~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~ 156 (468)
..+....+....+...+.+++.+++++++. + .+++|||+|.+++|+..+|+++|||.+.|+++++..++.+++.+..
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~pv~cvV~D~~~~w~~~vA~~~gip~~~f~~~~a~~~~~~~~~~~~ 159 (468)
T PLN02207 80 TQSVEAYVYDVIEKNIPLVRNIVMDILSSLALDGVKVKGFVADFFCLPMIDVAKDVSLPFYVFLTTNSGFLAMMQYLADR 159 (468)
T ss_pred ccCHHHHHHHHHHhcchhHHHHHHHHHHHhccCCCCeEEEEECCcchHHHHHHHHhCCCEEEEECccHHHHHHHHHhhhc
Confidence 123444444455555555566666654421 1 2348999999999999999999999999999999888888766443
Q ss_pred ccccc-ccccCCCCccccCCCCCCCCCCcCCCccccCCcchHHHHHHHhhccCCcEEEEcCccccCHHHHHHhhc-CCCC
Q 045570 157 QDRIS-TVFESSDDELLIPGITSPVPVCVMPSCLFNKDGGHATLVKLAQRFKDVDGIIVNTFHELEPYAVNAFSG-DLNP 234 (468)
Q Consensus 157 ~~~~~-~~~~~~~~~~~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~~~~~~-~~~p 234 (468)
..... ..++..+..+.+|+++.+++..+++..+.... .+..+.+.....++.+++++|||++||+.++..+.. ...|
T Consensus 160 ~~~~~~~~~~~~~~~~~vPgl~~~l~~~dlp~~~~~~~-~~~~~~~~~~~~~~~~~vlvNtf~~LE~~~~~~~~~~~~~p 238 (468)
T PLN02207 160 HSKDTSVFVRNSEEMLSIPGFVNPVPANVLPSALFVED-GYDAYVKLAILFTKANGILVNSSFDIEPYSVNHFLDEQNYP 238 (468)
T ss_pred cccccccCcCCCCCeEECCCCCCCCChHHCcchhcCCc-cHHHHHHHHHhcccCCEEEEEchHHHhHHHHHHHHhccCCC
Confidence 22110 00111123356899844688888887664333 355566666677889999999999999999888865 3567
Q ss_pred CeEEeccccCCCCCCCCCCChhcHhHHHHhhhcCCCCcEEEEeccCccccCHHHHHHHHHHHHhCCCcEEEEEecCCCCC
Q 045570 235 PLYTAGPVLHLKSQPNPDLDEAQYQKIFQWLDDLAESSVVFLCFGSSGSFDVAQVKEIAIGLERSGYNFLWSLRVSSPKD 314 (468)
Q Consensus 235 ~v~~vGpl~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vv~vs~GS~~~~~~~~~~~~~~al~~~~~~~iw~~~~~~~~~ 314 (468)
+++.|||++.......+......+++|.+|||++++++||||||||+...+.+++++++.+|+.++++|||+++....
T Consensus 239 ~v~~VGPl~~~~~~~~~~~~~~~~~~~~~WLd~~~~~sVVyvSfGS~~~~~~~q~~ela~~l~~~~~~flW~~r~~~~-- 316 (468)
T PLN02207 239 SVYAVGPIFDLKAQPHPEQDLARRDELMKWLDDQPEASVVFLCFGSMGRLRGPLVKEIAHGLELCQYRFLWSLRTEEV-- 316 (468)
T ss_pred cEEEecCCcccccCCCCccccchhhHHHHHHhcCCCCcEEEEEeccCcCCCHHHHHHHHHHHHHCCCcEEEEEeCCCc--
Confidence 899999998543211110001123679999999988899999999999999999999999999999999999985311
Q ss_pred ccccccccCCCCCCchhHHHHhcCCeEEEEeccHHHhhhccccceeeeccCchhHHHHHhcCCcEEeccCccccchhHHH
Q 045570 315 EVSAHRYVTNNGVFPEGFLERIKGRGMIWGWVPQVEILAHKAIGGFVSHCGWNSILESLWYGVPIATWPIYAEQQLNAFR 394 (468)
Q Consensus 315 ~~~~~~~~~~~~~lp~~~~~~~~~~~~v~~~vpq~~iL~~~~~~~~i~HgG~~s~~eal~~GvP~v~~P~~~DQ~~na~~ 394 (468)
...+.+|++|+++.++|+++++|+||.+||+|+++|+|||||||||++||+++|||||++|+++||+.||++
T Consensus 317 --------~~~~~lp~~f~er~~~~g~i~~W~PQ~~IL~H~~vg~FvTH~GwnS~~Eai~~GVP~l~~P~~~DQ~~Na~~ 388 (468)
T PLN02207 317 --------TNDDLLPEGFLDRVSGRGMICGWSPQVEILAHKAVGGFVSHCGWNSIVESLWFGVPIVTWPMYAEQQLNAFL 388 (468)
T ss_pred --------cccccCCHHHHhhcCCCeEEEEeCCHHHHhcccccceeeecCccccHHHHHHcCCCEEecCccccchhhHHH
Confidence 012468999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhhceEEEeeecccc-CCcccChhHHHHHHHHHhcC-cHHHHHHHHHHHHHHHHhhhcCCChHHHHHHHHHhhC
Q 045570 395 MVKELGLALDLRLDYRV-GSDLVMAGDIESAVRCLMDG-ENKIRKKVKEMAEISRKSLMEGGSSFNSIGQFISLNF 468 (468)
Q Consensus 395 ~~~~~G~G~~~~~~~~~-~~~~~~~~~l~~av~~vl~~-~~~~~~~a~~l~~~~~~~~~~gg~~~~~~~~~~~~~~ 468 (468)
+++.||+|+.+..++.. ..+.+++++|+++|+++|++ +++||+||+++++++++++.+||||+.++++||+++.
T Consensus 389 ~~~~~gvGv~~~~~~~~~~~~~v~~e~i~~av~~vm~~~~~~~r~~a~~l~~~a~~A~~~GGSS~~~l~~~v~~~~ 464 (468)
T PLN02207 389 MVKELKLAVELKLDYRVHSDEIVNANEIETAIRCVMNKDNNVVRKRVMDISQMIQRATKNGGSSFAAIEKFIHDVI 464 (468)
T ss_pred HHHHhCceEEEecccccccCCcccHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHH
Confidence 99878999987532110 11356999999999999962 4799999999999999999999999999999999873
No 2
>PLN02410 UDP-glucoronosyl/UDP-glucosyl transferase family protein
Probab=100.00 E-value=2.8e-73 Score=560.05 Aligned_cols=436 Identities=26% Similarity=0.422 Sum_probs=339.3
Q ss_pred CcEEEEEcCCCCCChHHHHHHHHHHHhCCCCeEEEEEecCCCCChhhhhhhcccCCCCCCeEEEeCCCCCCCC-CCCcCC
Q 045570 3 KAELIFVPSPGIGHLVSTLEFAKHLTDRDDRISVTILSMKLAVAPWVDAYTKSLTDSQPRICVIDLPPVDPPL-PDVLKK 81 (468)
Q Consensus 3 k~~i~~~~~p~~GH~~P~l~La~~L~~rGH~~~Vt~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~-~~~~~~ 81 (468)
++||+++|+|++||++||++||+.|+.||+. |||++++.++.. . .....++++..+|++.|++ .+. .
T Consensus 7 ~~HVvlvPfpaqGHi~P~l~LAk~La~~G~~--VT~v~T~~n~~~---~-----~~~~~~i~~~~ip~glp~~~~~~--~ 74 (451)
T PLN02410 7 RRRVVLVPVPAQGHISPMMQLAKTLHLKGFS--ITIAQTKFNYFS---P-----SDDFTDFQFVTIPESLPESDFKN--L 74 (451)
T ss_pred CCEEEEECCCccccHHHHHHHHHHHHcCCCE--EEEEeCcccccc---c-----ccCCCCeEEEeCCCCCCcccccc--c
Confidence 5699999999999999999999999999955 999999855321 0 0111369999999876653 222 1
Q ss_pred ChHHHHHHHHHhhchhHHHHHHhhhccCCCCccEEEEcCCcchHHHHHHHcCCCeEEEeCchhHHHHHHhhhhccccccc
Q 045570 82 SPEYFISLVVESHLPNVKNIVSSRSNSGSLQVTGLVLDFFCVSMVDIAKELSLPSYMFLTSNMGFLRLMLYLPTRQDRIS 161 (468)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~D~vv~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~ 161 (468)
....++..+.+.+.+.+++.++++..+...+++|||+|.+++|+..+|+++|||++.|++++++.++.++++..+...+.
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~L~~l~~~~~~p~~cVI~D~f~~Wa~dvA~~lgIP~v~F~t~~a~~~~~~~~~~~~~~~~~ 154 (451)
T PLN02410 75 GPIEFLHKLNKECQVSFKDCLGQLVLQQGNEIACVVYDEFMYFAEAAAKEFKLPNVIFSTTSATAFVCRSVFDKLYANNV 154 (451)
T ss_pred CHHHHHHHHHHHhHHHHHHHHHHHHhccCCCcEEEEECCcchHHHHHHHHcCCCEEEEEccCHHHHHHHHHHHHHHhccC
Confidence 23344555555666677788777643233467999999999999999999999999999999988887776543322110
Q ss_pred -ccccC--CCCccccCCCCCCCCCCcCCCccccCCc-chHHHHHHHhhccCCcEEEEcCccccCHHHHHHhhcCCCCCeE
Q 045570 162 -TVFES--SDDELLIPGITSPVPVCVMPSCLFNKDG-GHATLVKLAQRFKDVDGIIVNTFHELEPYAVNAFSGDLNPPLY 237 (468)
Q Consensus 162 -~~~~~--~~~~~~~p~~~~~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~~~~~~~~~p~v~ 237 (468)
.+... .+....+|+++ +++..+++........ ....+... ...++++++++|||++||+.++.++.....++++
T Consensus 155 ~~~~~~~~~~~~~~iPg~~-~~~~~dlp~~~~~~~~~~~~~~~~~-~~~~~~~~vlvNTf~eLE~~~~~~l~~~~~~~v~ 232 (451)
T PLN02410 155 LAPLKEPKGQQNELVPEFH-PLRCKDFPVSHWASLESIMELYRNT-VDKRTASSVIINTASCLESSSLSRLQQQLQIPVY 232 (451)
T ss_pred CCCccccccCccccCCCCC-CCChHHCcchhcCCcHHHHHHHHHH-hhcccCCEEEEeChHHhhHHHHHHHHhccCCCEE
Confidence 01111 11234578876 5777777754322110 12222222 2346788999999999999999998764446899
Q ss_pred EeccccCCCCCCCCCCChhcHhHHHHhhhcCCCCcEEEEeccCccccCHHHHHHHHHHHHhCCCcEEEEEecCCCCCccc
Q 045570 238 TAGPVLHLKSQPNPDLDEAQYQKIFQWLDDLAESSVVFLCFGSSGSFDVAQVKEIAIGLERSGYNFLWSLRVSSPKDEVS 317 (468)
Q Consensus 238 ~vGpl~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vv~vs~GS~~~~~~~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~ 317 (468)
+|||++.......+ . ....++|.+|||++++++||||||||+...+.+++++++.+|+.++++|||+++.+...+
T Consensus 233 ~vGpl~~~~~~~~~-~-~~~~~~~~~wLd~~~~~sVvyvsfGS~~~~~~~q~~ela~gLe~s~~~FlWv~r~~~~~~--- 307 (451)
T PLN02410 233 PIGPLHLVASAPTS-L-LEENKSCIEWLNKQKKNSVIFVSLGSLALMEINEVMETASGLDSSNQQFLWVIRPGSVRG--- 307 (451)
T ss_pred EecccccccCCCcc-c-cccchHHHHHHHhCCCCcEEEEEccccccCCHHHHHHHHHHHHhcCCCeEEEEccCcccc---
Confidence 99999754321100 0 122457899999998899999999999999999999999999999999999998532111
Q ss_pred cccccCCCCCCchhHHHHhcCCeEEEEeccHHHhhhccccceeeeccCchhHHHHHhcCCcEEeccCccccchhHHHHHh
Q 045570 318 AHRYVTNNGVFPEGFLERIKGRGMIWGWVPQVEILAHKAIGGFVSHCGWNSILESLWYGVPIATWPIYAEQQLNAFRMVK 397 (468)
Q Consensus 318 ~~~~~~~~~~lp~~~~~~~~~~~~v~~~vpq~~iL~~~~~~~~i~HgG~~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~ 397 (468)
.+....+|++|+|+.++|+++++|+||.+||+|+++++|||||||||++||+++|||||++|+++||+.||+++++
T Consensus 308 ----~~~~~~lp~~f~er~~~~g~v~~w~PQ~~iL~h~~v~~fvtH~G~nS~~Ea~~~GvP~l~~P~~~DQ~~na~~~~~ 383 (451)
T PLN02410 308 ----SEWIESLPKEFSKIISGRGYIVKWAPQKEVLSHPAVGGFWSHCGWNSTLESIGEGVPMICKPFSSDQKVNARYLEC 383 (451)
T ss_pred ----cchhhcCChhHHHhccCCeEEEccCCHHHHhCCCccCeeeecCchhHHHHHHHcCCCEEeccccccCHHHHHHHHH
Confidence 0111348999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred hhceEEEeeeccccCCcccChhHHHHHHHHHhcCc--HHHHHHHHHHHHHHHHhhhcCCChHHHHHHHHHhhC
Q 045570 398 ELGLALDLRLDYRVGSDLVMAGDIESAVRCLMDGE--NKIRKKVKEMAEISRKSLMEGGSSFNSIGQFISLNF 468 (468)
Q Consensus 398 ~~G~G~~~~~~~~~~~~~~~~~~l~~av~~vl~~~--~~~~~~a~~l~~~~~~~~~~gg~~~~~~~~~~~~~~ 468 (468)
.||+|+.+. +.+++++|+++|+++|.++ ++||+||+++++.+++++.+||||..++++||+++.
T Consensus 384 ~~~~G~~~~-------~~~~~~~v~~av~~lm~~~~~~~~r~~a~~l~~~~~~a~~~gGsS~~~l~~fv~~~~ 449 (451)
T PLN02410 384 VWKIGIQVE-------GDLDRGAVERAVKRLMVEEEGEEMRKRAISLKEQLRASVISGGSSHNSLEEFVHFMR 449 (451)
T ss_pred HhCeeEEeC-------CcccHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHH
Confidence 889999986 2789999999999999732 389999999999999999999999999999999873
No 3
>PLN02554 UDP-glycosyltransferase family protein
Probab=100.00 E-value=3.9e-73 Score=567.22 Aligned_cols=458 Identities=45% Similarity=0.800 Sum_probs=348.0
Q ss_pred CCcEEEEEcCCCCCChHHHHHHHHHHHhCCCCeEEEEEecCCCCChhh--hhhhcccC-CCCCCeEEEeCCCCCCCCCCC
Q 045570 2 KKAELIFVPSPGIGHLVSTLEFAKHLTDRDDRISVTILSMKLAVAPWV--DAYTKSLT-DSQPRICVIDLPPVDPPLPDV 78 (468)
Q Consensus 2 ~k~~i~~~~~p~~GH~~P~l~La~~L~~rGH~~~Vt~~~~~~~~~~~~--~~~~~~~~-~~~~~i~~~~~~~~~~~~~~~ 78 (468)
.|.||+++|+|++||++||++||+.|+.+|+++.|||++++.++...+ ...+++.. ...++|+++.+|++.++.. .
T Consensus 1 ~~~hvvl~P~paqGHi~P~l~LAk~La~~G~~~~vT~v~t~~~~~~~~~~~~~~~~~~~~~~~~i~~~~lp~~~~~~~-~ 79 (481)
T PLN02554 1 MKIELVFIPSPGIGHLRPTVELAKLLVDSDDRLSITVIIIPSRSGDDASSSAYIASLSASSEDRLRYEVISAGDQPTT-E 79 (481)
T ss_pred CceEEEEeCCcchhhHHHHHHHHHHHHhCCCCEEEEEEeCCCccchhhhhhhhhhhcccCCCCCeEEEEcCCCCCCcc-c
Confidence 166999999999999999999999999998667799999986654221 11222211 1123699999987754221 1
Q ss_pred cCCChHHHHHHHHHhhchhHHHHHHhhhccC---C-CCccEEEEcCCcchHHHHHHHcCCCeEEEeCchhHHHHHHhhhh
Q 045570 79 LKKSPEYFISLVVESHLPNVKNIVSSRSNSG---S-LQVTGLVLDFFCVSMVDIAKELSLPSYMFLTSNMGFLRLMLYLP 154 (468)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~---~-~~~D~vv~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~ 154 (468)
.. .+..+...+.+.+++.++++..+. . .+.+|||+|.+++|+..+|+++|||++.|+++++..++.+++.+
T Consensus 80 ---~~--~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~pv~cvV~D~f~~wa~dvA~~lgIP~~~F~t~sa~~~~~~~~~~ 154 (481)
T PLN02554 80 ---DP--TFQSYIDNQKPKVRDAVAKLVDDSSTPSSPRLAGFVVDMFCTSMIDVANEFGVPSYMFYTSNATFLGLQLHVQ 154 (481)
T ss_pred ---ch--HHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEECCcchhHHHHHHHhCCCEEEEeCCcHHHHHHHHhhh
Confidence 11 222344455667777777664321 1 23489999999999999999999999999999999999988875
Q ss_pred cccccc-c--ccccCCCCccccCCCCCCCCCCcCCCccccCCcchHHHHHHHhhccCCcEEEEcCccccCHHHHHHhhcC
Q 045570 155 TRQDRI-S--TVFESSDDELLIPGITSPVPVCVMPSCLFNKDGGHATLVKLAQRFKDVDGIIVNTFHELEPYAVNAFSGD 231 (468)
Q Consensus 155 ~~~~~~-~--~~~~~~~~~~~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~~~~~~~ 231 (468)
...... . ..+.+......+|+++.+++..+++..+.... .+..+.+......+.+|+++|||++||+.++..+.+.
T Consensus 155 ~~~~~~~~~~~~~~~~~~~v~iPgl~~pl~~~dlp~~~~~~~-~~~~~~~~~~~~~~~~gvlvNt~~eLe~~~~~~l~~~ 233 (481)
T PLN02554 155 MLYDEKKYDVSELEDSEVELDVPSLTRPYPVKCLPSVLLSKE-WLPLFLAQARRFREMKGILVNTVAELEPQALKFFSGS 233 (481)
T ss_pred hhccccccCccccCCCCceeECCCCCCCCCHHHCCCcccCHH-HHHHHHHHHHhcccCCEEEEechHHHhHHHHHHHHhc
Confidence 543221 0 01111123356898854677788886554332 4556667777788899999999999999999888764
Q ss_pred --CCCCeEEeccccCCCCCCCCCCChhcHhHHHHhhhcCCCCcEEEEeccCccccCHHHHHHHHHHHHhCCCcEEEEEec
Q 045570 232 --LNPPLYTAGPVLHLKSQPNPDLDEAQYQKIFQWLDDLAESSVVFLCFGSSGSFDVAQVKEIAIGLERSGYNFLWSLRV 309 (468)
Q Consensus 232 --~~p~v~~vGpl~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vv~vs~GS~~~~~~~~~~~~~~al~~~~~~~iw~~~~ 309 (468)
..|++++|||++........ .....+++|.+|||++++++||||||||+...+.+++++++.+|+.++++|||++++
T Consensus 234 ~~~~~~v~~vGpl~~~~~~~~~-~~~~~~~~~~~wLd~~~~~svvyvsfGS~~~~~~~~~~~la~~l~~~~~~flW~~~~ 312 (481)
T PLN02554 234 SGDLPPVYPVGPVLHLENSGDD-SKDEKQSEILRWLDEQPPKSVVFLCFGSMGGFSEEQAREIAIALERSGHRFLWSLRR 312 (481)
T ss_pred ccCCCCEEEeCCCccccccccc-cccccchHHHHHHhcCCCCcEEEEeccccccCCHHHHHHHHHHHHHcCCCeEEEEcC
Confidence 45789999999532221100 002345689999999988899999999999999999999999999999999999986
Q ss_pred CCCCCccc-cccccCCCCCCchhHHHHhcCCeEEEEeccHHHhhhccccceeeeccCchhHHHHHhcCCcEEeccCcccc
Q 045570 310 SSPKDEVS-AHRYVTNNGVFPEGFLERIKGRGMIWGWVPQVEILAHKAIGGFVSHCGWNSILESLWYGVPIATWPIYAEQ 388 (468)
Q Consensus 310 ~~~~~~~~-~~~~~~~~~~lp~~~~~~~~~~~~v~~~vpq~~iL~~~~~~~~i~HgG~~s~~eal~~GvP~v~~P~~~DQ 388 (468)
.......+ ..++.+..+.+|++|+++.++|+++++|+||.+||+|+++++|||||||||++||+++|||||++|+++||
T Consensus 313 ~~~~~~~~~~~~~~~~~~~lp~~~~~r~~~~g~v~~W~PQ~~iL~H~~v~~FvtH~G~nS~~Ea~~~GVP~l~~P~~~DQ 392 (481)
T PLN02554 313 ASPNIMKEPPGEFTNLEEILPEGFLDRTKDIGKVIGWAPQVAVLAKPAIGGFVTHCGWNSILESLWFGVPMAAWPLYAEQ 392 (481)
T ss_pred CcccccccccccccchhhhCChHHHHHhccCceEEeeCCHHHHhCCcccCcccccCccchHHHHHHcCCCEEecCccccc
Confidence 31100000 00011112347999999999999999999999999999999999999999999999999999999999999
Q ss_pred chhHHHHHhhhceEEEeeeccc-----cCCcccChhHHHHHHHHHhcCcHHHHHHHHHHHHHHHHhhhcCCChHHHHHHH
Q 045570 389 QLNAFRMVKELGLALDLRLDYR-----VGSDLVMAGDIESAVRCLMDGENKIRKKVKEMAEISRKSLMEGGSSFNSIGQF 463 (468)
Q Consensus 389 ~~na~~~~~~~G~G~~~~~~~~-----~~~~~~~~~~l~~av~~vl~~~~~~~~~a~~l~~~~~~~~~~gg~~~~~~~~~ 463 (468)
+.||+++++.||+|+.+++.+. .+.+.+++++|+++|+++|++|++||+||+++++++++++.+||||.+++++|
T Consensus 393 ~~Na~~~v~~~g~Gv~l~~~~~~~~~~~~~~~~~~e~l~~av~~vm~~~~~~r~~a~~l~~~~~~av~~gGss~~~l~~l 472 (481)
T PLN02554 393 KFNAFEMVEELGLAVEIRKYWRGDLLAGEMETVTAEEIERGIRCLMEQDSDVRKRVKEMSEKCHVALMDGGSSHTALKKF 472 (481)
T ss_pred hhhHHHHHHHhCceEEeeccccccccccccCeEcHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCChHHHHHHHH
Confidence 9999776666799999863110 01247899999999999996468999999999999999999999999999999
Q ss_pred HHhh
Q 045570 464 ISLN 467 (468)
Q Consensus 464 ~~~~ 467 (468)
|++|
T Consensus 473 v~~~ 476 (481)
T PLN02554 473 IQDV 476 (481)
T ss_pred HHHH
Confidence 9987
No 4
>PLN02167 UDP-glycosyltransferase family protein
Probab=100.00 E-value=7.2e-73 Score=564.42 Aligned_cols=460 Identities=53% Similarity=0.927 Sum_probs=346.2
Q ss_pred CCCcEEEEEcCCCCCChHHHHHHHHHHHhCCCCe-EEEEEecCCCCChhhhhhhcccCCCCCCeEEEeCCCCC-CCCCCC
Q 045570 1 MKKAELIFVPSPGIGHLVSTLEFAKHLTDRDDRI-SVTILSMKLAVAPWVDAYTKSLTDSQPRICVIDLPPVD-PPLPDV 78 (468)
Q Consensus 1 m~k~~i~~~~~p~~GH~~P~l~La~~L~~rGH~~-~Vt~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~~~~ 78 (468)
||++||+++|+|++||++||++||+.|+.+|..+ .||+++++.++.......++......++|+|+.+|++. +++.+.
T Consensus 1 ~~~~hVv~~PfpaqGHi~P~l~LAk~La~~G~~~t~vt~~~t~~~~~~~~~~~~~~~~~~~~~i~~~~lp~~~~p~~~~~ 80 (475)
T PLN02167 1 KKEAELIFVPFPSTGHILVTIEFAKRLINLDRRIHTITILYWSLPFAPQADAFLKSLIASEPRIRLVTLPEVQDPPPMEL 80 (475)
T ss_pred CCccEEEEeCChhhhhHHHHHHHHHHHHhCCCCeEEEEEEECCCCcchhhhHHHhhcccCCCCeEEEECCCCCCCccccc
Confidence 8999999999999999999999999999998432 36777765443322222232221122369999999764 221111
Q ss_pred cCCChHHHHHHHHHhhchhHHHHHHhhhccC---CC-CccEEEEcCCcchHHHHHHHcCCCeEEEeCchhHHHHHHhhhh
Q 045570 79 LKKSPEYFISLVVESHLPNVKNIVSSRSNSG---SL-QVTGLVLDFFCVSMVDIAKELSLPSYMFLTSNMGFLRLMLYLP 154 (468)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~---~~-~~D~vv~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~ 154 (468)
........+..+...+.+.+++.++++..+. .. +++|||+|.+++|+..+|+++|||++.|++++++.++.+++.+
T Consensus 81 ~~~~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~pv~cvV~D~f~~Wa~dVA~elgIP~v~F~t~~A~~~~~~~~~~ 160 (475)
T PLN02167 81 FVKASEAYILEFVKKMVPLVRDALSTLVSSRDESDSVRVAGLVLDFFCVPLIDVGNEFNLPSYIFLTCNAGFLGMMKYLP 160 (475)
T ss_pred cccchHHHHHHHHHHHHHHHHHHHHHHHhhccccCCCCeEEEEECCccHHHHHHHHHhCCCEEEEECccHHHHHHHHHHH
Confidence 0112222334455566667777777764321 11 4599999999999999999999999999999998888887654
Q ss_pred ccccccccccc--CCCCccccCCCCCCCCCCcCCCccccCCcchHHHHHHHhhccCCcEEEEcCccccCHHHHHHhhcC-
Q 045570 155 TRQDRISTVFE--SSDDELLIPGITSPVPVCVMPSCLFNKDGGHATLVKLAQRFKDVDGIIVNTFHELEPYAVNAFSGD- 231 (468)
Q Consensus 155 ~~~~~~~~~~~--~~~~~~~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~~~~~~~- 231 (468)
........... +...++.+|+++.+++..+++..+.... .+..+.+.....++++++++|||++||+.++..+...
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~iPgl~~~l~~~dlp~~~~~~~-~~~~~~~~~~~~~~a~~vlvNTf~eLE~~~~~~l~~~~ 239 (475)
T PLN02167 161 ERHRKTASEFDLSSGEEELPIPGFVNSVPTKVLPPGLFMKE-SYEAWVEIAERFPEAKGILVNSFTELEPNAFDYFSRLP 239 (475)
T ss_pred HhccccccccccCCCCCeeECCCCCCCCChhhCchhhhCcc-hHHHHHHHHHhhcccCEeeeccHHHHHHHHHHHHHhhc
Confidence 32111110111 1123355888854677778876554433 3555666777778899999999999999999888653
Q ss_pred -CCCCeEEeccccCCCCCCCCCCChhcHhHHHHhhhcCCCCcEEEEeccCccccCHHHHHHHHHHHHhCCCcEEEEEecC
Q 045570 232 -LNPPLYTAGPVLHLKSQPNPDLDEAQYQKIFQWLDDLAESSVVFLCFGSSGSFDVAQVKEIAIGLERSGYNFLWSLRVS 310 (468)
Q Consensus 232 -~~p~v~~vGpl~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vv~vs~GS~~~~~~~~~~~~~~al~~~~~~~iw~~~~~ 310 (468)
..|++++|||++..............+.+|.+|||.+++++||||||||+...+.+++.+++.+|+.++++|||+++..
T Consensus 240 ~~~p~v~~vGpl~~~~~~~~~~~~~~~~~~~~~wld~~~~~svvyvsfGS~~~~~~~~~~ela~~l~~~~~~flw~~~~~ 319 (475)
T PLN02167 240 ENYPPVYPVGPILSLKDRTSPNLDSSDRDRIMRWLDDQPESSVVFLCFGSLGSLPAPQIKEIAQALELVGCRFLWSIRTN 319 (475)
T ss_pred ccCCeeEEeccccccccccCCCCCcchhHHHHHHHhcCCCCceEEEeecccccCCHHHHHHHHHHHHhCCCcEEEEEecC
Confidence 3578999999976432110000012346799999999888999999999998999999999999999999999999853
Q ss_pred CCCCccccccccCCCCCCchhHHHHhcCCeEEEEeccHHHhhhccccceeeeccCchhHHHHHhcCCcEEeccCccccch
Q 045570 311 SPKDEVSAHRYVTNNGVFPEGFLERIKGRGMIWGWVPQVEILAHKAIGGFVSHCGWNSILESLWYGVPIATWPIYAEQQL 390 (468)
Q Consensus 311 ~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~v~~~vpq~~iL~~~~~~~~i~HgG~~s~~eal~~GvP~v~~P~~~DQ~~ 390 (468)
.... ......+|++|.|++.+++++++|+||.+||+|+++++|||||||||++||+++|||||++|+++||+.
T Consensus 320 ~~~~-------~~~~~~lp~~~~er~~~rg~v~~w~PQ~~iL~h~~vg~fvtH~G~nS~~Eal~~GvP~l~~P~~~DQ~~ 392 (475)
T PLN02167 320 PAEY-------ASPYEPLPEGFMDRVMGRGLVCGWAPQVEILAHKAIGGFVSHCGWNSVLESLWFGVPIATWPMYAEQQL 392 (475)
T ss_pred cccc-------cchhhhCChHHHHHhccCeeeeccCCHHHHhcCcccCeEEeeCCcccHHHHHHcCCCEEeccccccchh
Confidence 1100 011235899999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHhhhceEEEeeecccc-CCcccChhHHHHHHHHHhcCcHHHHHHHHHHHHHHHHhhhcCCChHHHHHHHHHhhC
Q 045570 391 NAFRMVKELGLALDLRLDYRV-GSDLVMAGDIESAVRCLMDGENKIRKKVKEMAEISRKSLMEGGSSFNSIGQFISLNF 468 (468)
Q Consensus 391 na~~~~~~~G~G~~~~~~~~~-~~~~~~~~~l~~av~~vl~~~~~~~~~a~~l~~~~~~~~~~gg~~~~~~~~~~~~~~ 468 (468)
||+++++.||+|+.+..++.. ....+++++|+++|+++|.++++||+||+++++.+++++.+||||..++++||++|.
T Consensus 393 na~~~~~~~g~g~~~~~~~~~~~~~~~~~~~l~~av~~~m~~~~~~r~~a~~~~~~~~~av~~gGsS~~~l~~~v~~i~ 471 (475)
T PLN02167 393 NAFTMVKELGLAVELRLDYVSAYGEIVKADEIAGAVRSLMDGEDVPRKKVKEIAEAARKAVMDGGSSFVAVKRFIDDLL 471 (475)
T ss_pred hHHHHHHHhCeeEEeecccccccCCcccHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHH
Confidence 998877777999998642100 013579999999999999744589999999999999999999999999999999873
No 5
>PLN03015 UDP-glucosyl transferase
Probab=100.00 E-value=1.2e-71 Score=545.41 Aligned_cols=450 Identities=32% Similarity=0.572 Sum_probs=341.4
Q ss_pred CCCcEEEEEcCCCCCChHHHHHHHHHHHhC-CCCeEEEEEecCCCCChhh-hhhhcccCCCCCCeEEEeCCCCCCCCCCC
Q 045570 1 MKKAELIFVPSPGIGHLVSTLEFAKHLTDR-DDRISVTILSMKLAVAPWV-DAYTKSLTDSQPRICVIDLPPVDPPLPDV 78 (468)
Q Consensus 1 m~k~~i~~~~~p~~GH~~P~l~La~~L~~r-GH~~~Vt~~~~~~~~~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 78 (468)
|.++||+++|+|++||++||+.||+.|+++ | +.||+++++.++.... ....+... ...+|++..+|++..++...
T Consensus 1 ~~~pHvvl~P~p~qGHi~P~l~LAk~La~~~g--~~vT~v~t~~~~~~~~~~~~~~~~~-~~~~i~~~~lp~~~~~~l~~ 77 (470)
T PLN03015 1 MDQPHALLVASPGLGHLIPILELGNRLSSVLN--IHVTILAVTSGSSSPTETEAIHAAA-ARTTCQITEIPSVDVDNLVE 77 (470)
T ss_pred CCCcEEEEECCcccccHHHHHHHHHHHHhCCC--CeEEEEECCCchhhhcccccccccc-CCCceEEEECCCCccccCCC
Confidence 788999999999999999999999999976 7 5699998875543211 11122111 11259999998654333211
Q ss_pred cCCChHHHHHHHHHhhchhHHHHHHhhhccCCCCccEEEEcCCcchHHHHHHHcCCC-eEEEeCchhHHHHHHhhhhccc
Q 045570 79 LKKSPEYFISLVVESHLPNVKNIVSSRSNSGSLQVTGLVLDFFCVSMVDIAKELSLP-SYMFLTSNMGFLRLMLYLPTRQ 157 (468)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~D~vv~D~~~~~~~~~A~~lgiP-~v~~~~~~~~~~~~~~~~~~~~ 157 (468)
.+.+....+....+.+.+.++++++++. .+++|||+|.+++|+..+|+++||| .+.|++++++..+.+++.+...
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~----~~~~ciV~D~f~~w~~~vA~~lgIP~~~~f~~~~a~~~~~~~~l~~~~ 153 (470)
T PLN03015 78 PDATIFTKMVVKMRAMKPAVRDAVKSMK----RKPTVMIVDFFGTALMSIADDVGVTAKYVYIPSHAWFLAVMVYLPVLD 153 (470)
T ss_pred CCccHHHHHHHHHHhchHHHHHHHHhcC----CCCeEEEEcCCcHHHHHHHHHcCCCEEEEEcCHHHHHHHHHHhhhhhh
Confidence 1113333334444566667777776652 3689999999999999999999999 5888888888777777665432
Q ss_pred ccccccccCCCCccccCCCCCCCCCCcCCCccccCCc-chHHHHHHHhhccCCcEEEEcCccccCHHHHHHhhcCC----
Q 045570 158 DRISTVFESSDDELLIPGITSPVPVCVMPSCLFNKDG-GHATLVKLAQRFKDVDGIIVNTFHELEPYAVNAFSGDL---- 232 (468)
Q Consensus 158 ~~~~~~~~~~~~~~~~p~~~~~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~~~~~~~~---- 232 (468)
............++.+|+++ +++..+++..+..... .+..+.+......+++|+++|||+|||+.++..+....
T Consensus 154 ~~~~~~~~~~~~~~~vPg~p-~l~~~dlp~~~~~~~~~~~~~~~~~~~~~~~a~gvlvNTf~eLE~~~~~~l~~~~~~~~ 232 (470)
T PLN03015 154 TVVEGEYVDIKEPLKIPGCK-PVGPKELMETMLDRSDQQYKECVRSGLEVPMSDGVLVNTWEELQGNTLAALREDMELNR 232 (470)
T ss_pred cccccccCCCCCeeeCCCCC-CCChHHCCHhhcCCCcHHHHHHHHHHHhcccCCEEEEechHHHhHHHHHHHHhhccccc
Confidence 11111110112335689986 6888888865543221 24455566666788999999999999999998886531
Q ss_pred --CCCeEEeccccCCCCCCCCCCChhcHhHHHHhhhcCCCCcEEEEeccCccccCHHHHHHHHHHHHhCCCcEEEEEecC
Q 045570 233 --NPPLYTAGPVLHLKSQPNPDLDEAQYQKIFQWLDDLAESSVVFLCFGSSGSFDVAQVKEIAIGLERSGYNFLWSLRVS 310 (468)
Q Consensus 233 --~p~v~~vGpl~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vv~vs~GS~~~~~~~~~~~~~~al~~~~~~~iw~~~~~ 310 (468)
.+++++|||++..... ...+++|.+|||++++++||||||||+...+.+++++++.+|+.++++|||+++..
T Consensus 233 ~~~~~v~~VGPl~~~~~~------~~~~~~~~~WLd~~~~~sVvyvsFGS~~~~~~~q~~ela~gl~~s~~~FlWv~r~~ 306 (470)
T PLN03015 233 VMKVPVYPIGPIVRTNVH------VEKRNSIFEWLDKQGERSVVYVCLGSGGTLTFEQTVELAWGLELSGQRFVWVLRRP 306 (470)
T ss_pred ccCCceEEecCCCCCccc------ccchHHHHHHHHhCCCCCEEEEECCcCCcCCHHHHHHHHHHHHhCCCcEEEEEecC
Confidence 2569999999742211 12345799999999889999999999999999999999999999999999999743
Q ss_pred CCC-CccccccccCCCCCCchhHHHHhcCCeEEE-EeccHHHhhhccccceeeeccCchhHHHHHhcCCcEEeccCcccc
Q 045570 311 SPK-DEVSAHRYVTNNGVFPEGFLERIKGRGMIW-GWVPQVEILAHKAIGGFVSHCGWNSILESLWYGVPIATWPIYAEQ 388 (468)
Q Consensus 311 ~~~-~~~~~~~~~~~~~~lp~~~~~~~~~~~~v~-~~vpq~~iL~~~~~~~~i~HgG~~s~~eal~~GvP~v~~P~~~DQ 388 (468)
... +..+ .+.++..+.+|++|.+++.+++.++ +|+||.+||+|+++++|||||||||++|++++|||||++|+++||
T Consensus 307 ~~~~~~~~-~~~~~~~~~lp~~f~er~~~rGl~v~~W~PQ~~vL~h~~vg~fvtH~GwnS~~Eai~~GvP~v~~P~~~DQ 385 (470)
T PLN03015 307 ASYLGASS-SDDDQVSASLPEGFLDRTRGVGLVVTQWAPQVEILSHRSIGGFLSHCGWSSVLESLTKGVPIVAWPLYAEQ 385 (470)
T ss_pred cccccccc-ccccchhhcCChHHHHhhccCceEEEecCCHHHHhccCccCeEEecCCchhHHHHHHcCCCEEecccccch
Confidence 110 0000 0001122358999999999998766 999999999999999999999999999999999999999999999
Q ss_pred chhHHHHHhhhceEEEeeeccccCCcccChhHHHHHHHHHhcC----cHHHHHHHHHHHHHHHHhhhcCCChHHHHHHHH
Q 045570 389 QLNAFRMVKELGLALDLRLDYRVGSDLVMAGDIESAVRCLMDG----ENKIRKKVKEMAEISRKSLMEGGSSFNSIGQFI 464 (468)
Q Consensus 389 ~~na~~~~~~~G~G~~~~~~~~~~~~~~~~~~l~~av~~vl~~----~~~~~~~a~~l~~~~~~~~~~gg~~~~~~~~~~ 464 (468)
+.||+++++.||+|+++.... +.+.+++++|+++|+++|++ ..++|+||+++++++++++.+||||++++++|+
T Consensus 386 ~~na~~~~~~~gvg~~~~~~~--~~~~v~~e~i~~~v~~lm~~~~eeg~~~R~ra~~lk~~a~~Av~eGGSS~~nl~~~~ 463 (470)
T PLN03015 386 WMNATLLTEEIGVAVRTSELP--SEKVIGREEVASLVRKIVAEEDEEGQKIRAKAEEVRVSSERAWSHGGSSYNSLFEWA 463 (470)
T ss_pred HHHHHHHHHHhCeeEEecccc--cCCccCHHHHHHHHHHHHccCcccHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHH
Confidence 999999988899999985210 12479999999999999951 259999999999999999999999999999999
Q ss_pred Hhh
Q 045570 465 SLN 467 (468)
Q Consensus 465 ~~~ 467 (468)
+++
T Consensus 464 ~~~ 466 (470)
T PLN03015 464 KRC 466 (470)
T ss_pred Hhc
Confidence 875
No 6
>PLN00164 glucosyltransferase; Provisional
Probab=100.00 E-value=2e-71 Score=552.64 Aligned_cols=453 Identities=42% Similarity=0.751 Sum_probs=343.8
Q ss_pred CCCcEEEEEcCCCCCChHHHHHHHHHHHhCCC--CeEEEEEecCCCCCh---hhhhhhcccCCCCCCeEEEeCCCCCCC-
Q 045570 1 MKKAELIFVPSPGIGHLVSTLEFAKHLTDRDD--RISVTILSMKLAVAP---WVDAYTKSLTDSQPRICVIDLPPVDPP- 74 (468)
Q Consensus 1 m~k~~i~~~~~p~~GH~~P~l~La~~L~~rGH--~~~Vt~~~~~~~~~~---~~~~~~~~~~~~~~~i~~~~~~~~~~~- 74 (468)
|.|+||+++|+|++||++||++||+.|+.||+ ++.|||++++.+.+. .....+........+|+++++|++.++
T Consensus 1 ~~~~HVVlvPfpaqGHi~P~l~LAk~La~~g~~~~~~vT~~~t~~~~~~~~~~~~~~~~~~~~~~~~i~~~~lp~~~~p~ 80 (480)
T PLN00164 1 MAAPTVVLLPVWGSGHLMSMLEAGKRLLASSGGGALSLTVLVMPPPTPESASEVAAHVRREAASGLDIRFHHLPAVEPPT 80 (480)
T ss_pred CCCCEEEEeCCcchhHHHHHHHHHHHHHhCCCCCcEEEEEEEcCCCccchhHHHHHHHhhcccCCCCEEEEECCCCCCCC
Confidence 88999999999999999999999999999972 256999998765431 112222111111225999999976522
Q ss_pred CCCCcCCChHHHHHHHHHhhchhHHHHHHhhhccCCCCccEEEEcCCcchHHHHHHHcCCCeEEEeCchhHHHHHHhhhh
Q 045570 75 LPDVLKKSPEYFISLVVESHLPNVKNIVSSRSNSGSLQVTGLVLDFFCVSMVDIAKELSLPSYMFLTSNMGFLRLMLYLP 154 (468)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~D~vv~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~ 154 (468)
+.+ +...++..+...+.+.++++++++ ..+++|||+|.+++|+..+|+++|||++.|++++++.++.+++.+
T Consensus 81 ~~e----~~~~~~~~~~~~~~~~l~~~L~~l----~~pv~cIV~D~f~~Wa~dVA~elgIP~v~F~t~sA~~~~~~~~~~ 152 (480)
T PLN00164 81 DAA----GVEEFISRYIQLHAPHVRAAIAGL----SCPVAALVVDFFCTPLLDVARELAVPAYVYFTSTAAMLALMLRLP 152 (480)
T ss_pred ccc----cHHHHHHHHHHhhhHHHHHHHHhc----CCCceEEEECCcchhHHHHHHHhCCCEEEEECccHHHHHHHhhhh
Confidence 221 233344444555555666666554 235699999999999999999999999999999999998888765
Q ss_pred cccccccccccCCCCccccCCCCCCCCCCcCCCccccCC-cchHHHHHHHhhccCCcEEEEcCccccCHHHHHHhhcCC-
Q 045570 155 TRQDRISTVFESSDDELLIPGITSPVPVCVMPSCLFNKD-GGHATLVKLAQRFKDVDGIIVNTFHELEPYAVNAFSGDL- 232 (468)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~~~~~~~~- 232 (468)
........+......+..+|+++ +++..+++..+.... ..+..+....+...+.+++++|||+|||+.++..+....
T Consensus 153 ~~~~~~~~~~~~~~~~~~iPGlp-~l~~~dlp~~~~~~~~~~~~~~~~~~~~~~~~~~vlvNTf~eLE~~~~~~~~~~~~ 231 (480)
T PLN00164 153 ALDEEVAVEFEEMEGAVDVPGLP-PVPASSLPAPVMDKKSPNYAWFVYHGRRFMEAAGIIVNTAAELEPGVLAAIADGRC 231 (480)
T ss_pred hhcccccCcccccCcceecCCCC-CCChHHCCchhcCCCcHHHHHHHHHHHhhhhcCEEEEechHHhhHHHHHHHHhccc
Confidence 43222111111111234588886 688888887654332 124455555666778899999999999999998887531
Q ss_pred -----CCCeEEeccccCCCCCCCCCCChhcHhHHHHhhhcCCCCcEEEEeccCccccCHHHHHHHHHHHHhCCCcEEEEE
Q 045570 233 -----NPPLYTAGPVLHLKSQPNPDLDEAQYQKIFQWLDDLAESSVVFLCFGSSGSFDVAQVKEIAIGLERSGYNFLWSL 307 (468)
Q Consensus 233 -----~p~v~~vGpl~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vv~vs~GS~~~~~~~~~~~~~~al~~~~~~~iw~~ 307 (468)
.|+++.|||++........ ...+++|.+|||++++++||||||||+...+.+++.+++.+|+.++++|||++
T Consensus 232 ~~~~~~~~v~~vGPl~~~~~~~~~---~~~~~~~~~wLd~~~~~svvyvsfGS~~~~~~~q~~ela~gL~~s~~~flWv~ 308 (480)
T PLN00164 232 TPGRPAPTVYPIGPVISLAFTPPA---EQPPHECVRWLDAQPPASVVFLCFGSMGFFDAPQVREIAAGLERSGHRFLWVL 308 (480)
T ss_pred cccCCCCceEEeCCCccccccCCC---ccchHHHHHHHHhCCCCceEEEEecccccCCHHHHHHHHHHHHHcCCCEEEEE
Confidence 3679999999743211100 23457899999999889999999999999999999999999999999999999
Q ss_pred ecCCCCCccccccccCCCCCCchhHHHHhcCCeEEE-EeccHHHhhhccccceeeeccCchhHHHHHhcCCcEEeccCcc
Q 045570 308 RVSSPKDEVSAHRYVTNNGVFPEGFLERIKGRGMIW-GWVPQVEILAHKAIGGFVSHCGWNSILESLWYGVPIATWPIYA 386 (468)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~v~-~~vpq~~iL~~~~~~~~i~HgG~~s~~eal~~GvP~v~~P~~~ 386 (468)
+.....+..++.+ ++..+.+|++|.++.++++.++ +|+||.+||+|+++++|||||||||++||+++|||||++|+++
T Consensus 309 ~~~~~~~~~~~~~-~~~~~~lp~~~~~~~~~~g~~v~~w~PQ~~iL~h~~vg~fvtH~GwnS~~Eai~~GVP~l~~P~~~ 387 (480)
T PLN00164 309 RGPPAAGSRHPTD-ADLDELLPEGFLERTKGRGLVWPTWAPQKEILAHAAVGGFVTHCGWNSVLESLWHGVPMAPWPLYA 387 (480)
T ss_pred cCCcccccccccc-cchhhhCChHHHHHhcCCCeEEeecCCHHHHhcCcccCeEEeecccchHHHHHHcCCCEEeCCccc
Confidence 8542111000000 0112348999999999888887 9999999999999999999999999999999999999999999
Q ss_pred ccchhHHHHHhhhceEEEeeeccccCCcccChhHHHHHHHHHhcC----cHHHHHHHHHHHHHHHHhhhcCCChHHHHHH
Q 045570 387 EQQLNAFRMVKELGLALDLRLDYRVGSDLVMAGDIESAVRCLMDG----ENKIRKKVKEMAEISRKSLMEGGSSFNSIGQ 462 (468)
Q Consensus 387 DQ~~na~~~~~~~G~G~~~~~~~~~~~~~~~~~~l~~av~~vl~~----~~~~~~~a~~l~~~~~~~~~~gg~~~~~~~~ 462 (468)
||+.||+++++.||+|+.+..+.. +.+.+++++|+++|+++|.+ .+.+|+||+++++++++++.+||||++++++
T Consensus 388 DQ~~Na~~~~~~~gvG~~~~~~~~-~~~~~~~e~l~~av~~vm~~~~~~~~~~r~~a~~~~~~~~~a~~~gGSS~~~l~~ 466 (480)
T PLN00164 388 EQHLNAFELVADMGVAVAMKVDRK-RDNFVEAAELERAVRSLMGGGEEEGRKAREKAAEMKAACRKAVEEGGSSYAALQR 466 (480)
T ss_pred cchhHHHHHHHHhCeEEEeccccc-cCCcCcHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHH
Confidence 999999998887899999853200 01357999999999999973 1368999999999999999999999999999
Q ss_pred HHHhh
Q 045570 463 FISLN 467 (468)
Q Consensus 463 ~~~~~ 467 (468)
||+++
T Consensus 467 ~v~~~ 471 (480)
T PLN00164 467 LAREI 471 (480)
T ss_pred HHHHH
Confidence 99987
No 7
>PLN03004 UDP-glycosyltransferase
Probab=100.00 E-value=2.6e-71 Score=543.74 Aligned_cols=443 Identities=33% Similarity=0.631 Sum_probs=333.3
Q ss_pred CCCcEEEEEcCCCCCChHHHHHHHHHHHhCC--CCeEEEEEecCCCCChhhhhhhcccCCCCCCeEEEeCCCCCCC-CCC
Q 045570 1 MKKAELIFVPSPGIGHLVSTLEFAKHLTDRD--DRISVTILSMKLAVAPWVDAYTKSLTDSQPRICVIDLPPVDPP-LPD 77 (468)
Q Consensus 1 m~k~~i~~~~~p~~GH~~P~l~La~~L~~rG--H~~~Vt~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-~~~ 77 (468)
|.+.||+++|+|++||++||++||+.|+++| +.++||+++++.+... .....+......++++++.+|++.+. ...
T Consensus 1 ~~~~Hvvl~P~p~qGHi~P~l~LA~~La~~g~~~~vti~~~~~~~~~~~-~~~~~~~~~~~~~~i~~~~lp~~~~~~~~~ 79 (451)
T PLN03004 1 MGEEAIVLYPAPPIGHLVSMVELGKTILSKNPSLSIHIILVPPPYQPES-TATYISSVSSSFPSITFHHLPAVTPYSSSS 79 (451)
T ss_pred CCCcEEEEeCCcccchHHHHHHHHHHHHhCCCceEEEEEEecCcchhhh-hhhhhccccCCCCCeEEEEcCCCCCCCCcc
Confidence 8889999999999999999999999999998 5655555665432211 11112221112236999999877532 111
Q ss_pred CcCCChHHHHHHHHHhhchhHHHHHHhhhccCCCCccEEEEcCCcchHHHHHHHcCCCeEEEeCchhHHHHHHhhhhccc
Q 045570 78 VLKKSPEYFISLVVESHLPNVKNIVSSRSNSGSLQVTGLVLDFFCVSMVDIAKELSLPSYMFLTSNMGFLRLMLYLPTRQ 157 (468)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~D~vv~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~ 157 (468)
....+....+......+.+.+.+.++++.. ..+++|||+|.+++|+..+|+++|||++.|++++++.++.+++.+...
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~--~~pv~cII~D~~~~Wa~~vA~~lgIP~v~F~t~sA~~~~~~~~~~~~~ 157 (451)
T PLN03004 80 TSRHHHESLLLEILCFSNPSVHRTLFSLSR--NFNVRAMIIDFFCTAVLDITADFTFPVYFFYTSGAACLAFSFYLPTID 157 (451)
T ss_pred ccccCHHHHHHHHHHhhhHHHHHHHHhcCC--CCCceEEEECCcchhHHHHHHHhCCCEEEEeCHhHHHHHHHHHHHhcc
Confidence 111233334444455666677777776521 234699999999999999999999999999999999999888765332
Q ss_pred cccc-ccccCCCCccccCCCCCCCCCCcCCCccccCCc-chHHHHHHHhhccCCcEEEEcCccccCHHHHHHhhcCC-CC
Q 045570 158 DRIS-TVFESSDDELLIPGITSPVPVCVMPSCLFNKDG-GHATLVKLAQRFKDVDGIIVNTFHELEPYAVNAFSGDL-NP 234 (468)
Q Consensus 158 ~~~~-~~~~~~~~~~~~p~~~~~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~~~~~~~~-~p 234 (468)
.... .... ......+|+++ +++..+++..+..... .+..+.+........+++++|||++||+.++..+.... .+
T Consensus 158 ~~~~~~~~~-~~~~v~iPg~p-~l~~~dlp~~~~~~~~~~~~~~~~~~~~~~~~~~vl~NTf~eLE~~~l~~l~~~~~~~ 235 (451)
T PLN03004 158 ETTPGKNLK-DIPTVHIPGVP-PMKGSDMPKAVLERDDEVYDVFIMFGKQLSKSSGIIINTFDALENRAIKAITEELCFR 235 (451)
T ss_pred ccccccccc-cCCeecCCCCC-CCChHHCchhhcCCchHHHHHHHHHHHhhcccCeeeeeeHHHhHHHHHHHHHhcCCCC
Confidence 1110 0011 11234678886 6788888876643321 24556666667778889999999999999999986542 36
Q ss_pred CeEEeccccCCCCCCCCCCChhcHhHHHHhhhcCCCCcEEEEeccCccccCHHHHHHHHHHHHhCCCcEEEEEecCCCCC
Q 045570 235 PLYTAGPVLHLKSQPNPDLDEAQYQKIFQWLDDLAESSVVFLCFGSSGSFDVAQVKEIAIGLERSGYNFLWSLRVSSPKD 314 (468)
Q Consensus 235 ~v~~vGpl~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vv~vs~GS~~~~~~~~~~~~~~al~~~~~~~iw~~~~~~~~~ 314 (468)
+++.|||++...... ... ...+.+|.+|||++++++||||||||+...+.+++++|+.+|+.++++|||+++......
T Consensus 236 ~v~~vGPl~~~~~~~-~~~-~~~~~~c~~wLd~~~~~sVvyvsfGS~~~~~~~q~~ela~gL~~s~~~FlW~~r~~~~~~ 313 (451)
T PLN03004 236 NIYPIGPLIVNGRIE-DRN-DNKAVSCLNWLDSQPEKSVVFLCFGSLGLFSKEQVIEIAVGLEKSGQRFLWVVRNPPELE 313 (451)
T ss_pred CEEEEeeeccCcccc-ccc-cchhhHHHHHHHhCCCCceEEEEecccccCCHHHHHHHHHHHHHCCCCEEEEEcCCcccc
Confidence 799999997432111 000 112457999999998899999999999999999999999999999999999998531000
Q ss_pred ccccccccCCCCCCchhHHHHhcCCeEE-EEeccHHHhhhccccceeeeccCchhHHHHHhcCCcEEeccCccccchhHH
Q 045570 315 EVSAHRYVTNNGVFPEGFLERIKGRGMI-WGWVPQVEILAHKAIGGFVSHCGWNSILESLWYGVPIATWPIYAEQQLNAF 393 (468)
Q Consensus 315 ~~~~~~~~~~~~~lp~~~~~~~~~~~~v-~~~vpq~~iL~~~~~~~~i~HgG~~s~~eal~~GvP~v~~P~~~DQ~~na~ 393 (468)
.+..+....+|++|+++.++++.+ .+|+||.+||+|+++|+|||||||||++||+++|||||++|+++||+.||+
T Consensus 314 ----~~~~~~~~~lp~gf~er~~~~g~~v~~W~PQ~~iL~H~~v~~FvTH~G~nS~lEal~~GVP~v~~P~~~DQ~~na~ 389 (451)
T PLN03004 314 ----KTELDLKSLLPEGFLSRTEDKGMVVKSWAPQVPVLNHKAVGGFVTHCGWNSILEAVCAGVPMVAWPLYAEQRFNRV 389 (451)
T ss_pred ----ccccchhhhCChHHHHhccCCcEEEEeeCCHHHHhCCCccceEeccCcchHHHHHHHcCCCEEeccccccchhhHH
Confidence 000011224899999999876655 599999999999999999999999999999999999999999999999999
Q ss_pred HHHhhhceEEEeeeccccCCcccChhHHHHHHHHHhcCcHHHHHHHHHHHHHHHHhhhcCCChHH
Q 045570 394 RMVKELGLALDLRLDYRVGSDLVMAGDIESAVRCLMDGENKIRKKVKEMAEISRKSLMEGGSSFN 458 (468)
Q Consensus 394 ~~~~~~G~G~~~~~~~~~~~~~~~~~~l~~av~~vl~~~~~~~~~a~~l~~~~~~~~~~gg~~~~ 458 (468)
++++.||+|+.++.+ +.+.+++++|+++|+++|+ +++||+||+++++..++++.+||||++
T Consensus 390 ~~~~~~g~g~~l~~~---~~~~~~~e~l~~av~~vm~-~~~~r~~a~~~~~~a~~Av~~GGSS~~ 450 (451)
T PLN03004 390 MIVDEIKIAISMNES---ETGFVSSTEVEKRVQEIIG-ECPVRERTMAMKNAAELALTETGSSHT 450 (451)
T ss_pred HHHHHhCceEEecCC---cCCccCHHHHHHHHHHHhc-CHHHHHHHHHHHHHHHHHhcCCCCCCC
Confidence 999878999999742 1236799999999999998 799999999999999999999999864
No 8
>PLN02992 coniferyl-alcohol glucosyltransferase
Probab=100.00 E-value=3.9e-71 Score=545.04 Aligned_cols=443 Identities=29% Similarity=0.540 Sum_probs=334.8
Q ss_pred CcEEEEEcCCCCCChHHHHHHHHHHH-hCCCCeEEEEEecCCCCChhhhhhhcccCCCCCCeEEEeCCCCCCCCCCCcCC
Q 045570 3 KAELIFVPSPGIGHLVSTLEFAKHLT-DRDDRISVTILSMKLAVAPWVDAYTKSLTDSQPRICVIDLPPVDPPLPDVLKK 81 (468)
Q Consensus 3 k~~i~~~~~p~~GH~~P~l~La~~L~-~rGH~~~Vt~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 81 (468)
|+||+++|+|++||++||+.||+.|+ ++|+. |||++++.+......... . ..++++..+|+...++......
T Consensus 5 ~pHVvl~P~paqGHi~P~l~LAk~La~~~g~~--vT~v~t~~n~~~~~~~~~----~-~~~i~~~~lp~p~~~glp~~~~ 77 (481)
T PLN02992 5 KPHAAMFSSPGMGHVIPVIELGKRLSANHGFH--VTVFVLETDAASAQSKFL----N-STGVDIVGLPSPDISGLVDPSA 77 (481)
T ss_pred CcEEEEeCCcccchHHHHHHHHHHHHhCCCcE--EEEEeCCCchhhhhhccc----c-CCCceEEECCCccccCCCCCCc
Confidence 78999999999999999999999998 78955 999999855322111111 1 1358999888633222110111
Q ss_pred ChHHHHHHHHHhhchhHHHHHHhhhccCCCCccEEEEcCCcchHHHHHHHcCCCeEEEeCchhHHHHHHhhhhccccccc
Q 045570 82 SPEYFISLVVESHLPNVKNIVSSRSNSGSLQVTGLVLDFFCVSMVDIAKELSLPSYMFLTSNMGFLRLMLYLPTRQDRIS 161 (468)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~D~vv~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~ 161 (468)
+....+......+.+.+++++++. ..+++|||+|.+++|+..+|+++|||++.|++++++.++.+.+.+.+.....
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~l~~~----~~~p~cvV~D~f~~Wa~dVA~elgIP~v~F~t~sA~~~~~~~~~~~~~~~~~ 153 (481)
T PLN02992 78 HVVTKIGVIMREAVPTLRSKIAEM----HQKPTALIVDLFGTDALCLGGEFNMLTYIFIASNARFLGVSIYYPTLDKDIK 153 (481)
T ss_pred cHHHHHHHHHHHhHHHHHHHHHhc----CCCCeEEEECCcchhHHHHHHHcCCCEEEEecCcHHHHHHHHhhhhhccccc
Confidence 222223333444556666666654 2368999999999999999999999999999999988877666543221111
Q ss_pred ccccCCCCccccCCCCCCCCCCcCCCccccCC-cchHHHHHHHhhccCCcEEEEcCccccCHHHHHHhhcC------CCC
Q 045570 162 TVFESSDDELLIPGITSPVPVCVMPSCLFNKD-GGHATLVKLAQRFKDVDGIIVNTFHELEPYAVNAFSGD------LNP 234 (468)
Q Consensus 162 ~~~~~~~~~~~~p~~~~~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~~~~~~~------~~p 234 (468)
........+..+|+++ +++..+++..+.... ..+..+.+.......++++++|||++||+.++..+... ..+
T Consensus 154 ~~~~~~~~~~~iPg~~-~l~~~dlp~~~~~~~~~~~~~~~~~~~~~~~a~gvlvNTf~eLE~~~l~~l~~~~~~~~~~~~ 232 (481)
T PLN02992 154 EEHTVQRKPLAMPGCE-PVRFEDTLDAYLVPDEPVYRDFVRHGLAYPKADGILVNTWEEMEPKSLKSLQDPKLLGRVARV 232 (481)
T ss_pred cccccCCCCcccCCCC-ccCHHHhhHhhcCCCcHHHHHHHHHHHhcccCCEEEEechHHHhHHHHHHHhhccccccccCC
Confidence 0000111235688885 677778876443322 13556667777778899999999999999999988642 125
Q ss_pred CeEEeccccCCCCCCCCCCChhcHhHHHHhhhcCCCCcEEEEeccCccccCHHHHHHHHHHHHhCCCcEEEEEecCCCCC
Q 045570 235 PLYTAGPVLHLKSQPNPDLDEAQYQKIFQWLDDLAESSVVFLCFGSSGSFDVAQVKEIAIGLERSGYNFLWSLRVSSPKD 314 (468)
Q Consensus 235 ~v~~vGpl~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vv~vs~GS~~~~~~~~~~~~~~al~~~~~~~iw~~~~~~~~~ 314 (468)
+++.|||++..... ...+++|.+|||++++++||||||||+..++.+++++++.+|+.++++|||+++......
T Consensus 233 ~v~~VGPl~~~~~~------~~~~~~c~~wLd~~~~~sVvyvsfGS~~~l~~~q~~ela~gL~~s~~~flW~~r~~~~~~ 306 (481)
T PLN02992 233 PVYPIGPLCRPIQS------SKTDHPVLDWLNKQPNESVLYISFGSGGSLSAKQLTELAWGLEMSQQRFVWVVRPPVDGS 306 (481)
T ss_pred ceEEecCccCCcCC------CcchHHHHHHHHcCCCCceEEEeecccccCCHHHHHHHHHHHHHcCCCEEEEEeCCcccc
Confidence 69999999753221 223567999999998889999999999999999999999999999999999997431000
Q ss_pred ----cccccc---ccCCCCCCchhHHHHhcCCeEEE-EeccHHHhhhccccceeeeccCchhHHHHHhcCCcEEeccCcc
Q 045570 315 ----EVSAHR---YVTNNGVFPEGFLERIKGRGMIW-GWVPQVEILAHKAIGGFVSHCGWNSILESLWYGVPIATWPIYA 386 (468)
Q Consensus 315 ----~~~~~~---~~~~~~~lp~~~~~~~~~~~~v~-~~vpq~~iL~~~~~~~~i~HgG~~s~~eal~~GvP~v~~P~~~ 386 (468)
.+.... .++..+.+|++|+|++++++.++ +|+||.+||+|+++++|||||||||++||+++|||||++|+++
T Consensus 307 ~~~~~~~~~~~~~~~~~~~~lp~~f~eR~~~rg~vv~~W~PQ~~iL~h~~vg~FitH~G~nS~~Eal~~GVP~l~~P~~~ 386 (481)
T PLN02992 307 ACSAYFSANGGETRDNTPEYLPEGFVSRTHDRGFVVPSWAPQAEILAHQAVGGFLTHCGWSSTLESVVGGVPMIAWPLFA 386 (481)
T ss_pred cccccccCcccccccchhhhCCHHHHHHhcCCCEEEeecCCHHHHhCCcccCeeEecCchhHHHHHHHcCCCEEecCccc
Confidence 000000 00112358999999999887766 9999999999999999999999999999999999999999999
Q ss_pred ccchhHHHHHhhhceEEEeeeccccCCcccChhHHHHHHHHHhcCc--HHHHHHHHHHHHHHHHhhh--cCCChHHHHHH
Q 045570 387 EQQLNAFRMVKELGLALDLRLDYRVGSDLVMAGDIESAVRCLMDGE--NKIRKKVKEMAEISRKSLM--EGGSSFNSIGQ 462 (468)
Q Consensus 387 DQ~~na~~~~~~~G~G~~~~~~~~~~~~~~~~~~l~~av~~vl~~~--~~~~~~a~~l~~~~~~~~~--~gg~~~~~~~~ 462 (468)
||+.||+++++.+|+|+.++.. ++.+++++|+++|+++|.++ +++|+|++++++.+++++. +||||.+++++
T Consensus 387 DQ~~na~~~~~~~g~gv~~~~~----~~~~~~~~l~~av~~vm~~~~g~~~r~~a~~~~~~a~~Av~~~~GGSS~~~l~~ 462 (481)
T PLN02992 387 EQNMNAALLSDELGIAVRSDDP----KEVISRSKIEALVRKVMVEEEGEEMRRKVKKLRDTAEMSLSIDGGGVAHESLCR 462 (481)
T ss_pred hhHHHHHHHHHHhCeeEEecCC----CCcccHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHhcCCCCCchHHHHHH
Confidence 9999999997667999999742 23689999999999999732 4899999999999999994 69999999999
Q ss_pred HHHhh
Q 045570 463 FISLN 467 (468)
Q Consensus 463 ~~~~~ 467 (468)
||+++
T Consensus 463 ~v~~~ 467 (481)
T PLN02992 463 VTKEC 467 (481)
T ss_pred HHHHH
Confidence 99976
No 9
>PLN02152 indole-3-acetate beta-glucosyltransferase
Probab=100.00 E-value=5.5e-71 Score=542.03 Aligned_cols=441 Identities=23% Similarity=0.376 Sum_probs=338.7
Q ss_pred CCCcEEEEEcCCCCCChHHHHHHHHHHHh-CCCCeEEEEEecCCCCChhhhhhhcccCCCCCCeEEEeCCCCCCCCCCCc
Q 045570 1 MKKAELIFVPSPGIGHLVSTLEFAKHLTD-RDDRISVTILSMKLAVAPWVDAYTKSLTDSQPRICVIDLPPVDPPLPDVL 79 (468)
Q Consensus 1 m~k~~i~~~~~p~~GH~~P~l~La~~L~~-rGH~~~Vt~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 79 (468)
|.++||+++|+|++||++||++||+.|++ +|.. |||++++.+... ....+. ...++++|+.++++.+++.+..
T Consensus 1 ~~~~hvv~~P~p~qGHi~P~l~La~~La~~~G~~--vT~v~t~~~~~~---~~~~~~-~~~~~i~~~~i~dglp~g~~~~ 74 (455)
T PLN02152 1 MAPPHFLLVTFPAQGHVNPSLRFARRLIKTTGTR--VTFATCLSVIHR---SMIPNH-NNVENLSFLTFSDGFDDGVISN 74 (455)
T ss_pred CCCcEEEEecCcccccHHHHHHHHHHHhhCCCcE--EEEEeccchhhh---hhhccC-CCCCCEEEEEcCCCCCCccccc
Confidence 88899999999999999999999999996 6855 999999743111 112211 1123699999987666553222
Q ss_pred CCChHHHHHHHHHhhchhHHHHHHhhhccCCCCccEEEEcCCcchHHHHHHHcCCCeEEEeCchhHHHHHHhhhhccccc
Q 045570 80 KKSPEYFISLVVESHLPNVKNIVSSRSNSGSLQVTGLVLDFFCVSMVDIAKELSLPSYMFLTSNMGFLRLMLYLPTRQDR 159 (468)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~D~vv~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~ 159 (468)
..+....+....+.+.+.+.++++++... ..+++|||+|.+++|+..+|+++|||++.|++++++.++.+++....
T Consensus 75 ~~~~~~~~~~~~~~~~~~l~~~l~~l~~~-~~pv~ciV~D~~~~wa~dvA~~lgIP~~~f~t~~a~~~~~~~~~~~~--- 150 (455)
T PLN02152 75 TDDVQNRLVNFERNGDKALSDFIEANLNG-DSPVTCLIYTILPNWAPKVARRFHLPSVLLWIQPAFVFDIYYNYSTG--- 150 (455)
T ss_pred cccHHHHHHHHHHhccHHHHHHHHHhhcc-CCCceEEEECCccHhHHHHHHHhCCCEEEEECccHHHHHHHHHhhcc---
Confidence 23444455556666777888888775321 13469999999999999999999999999999999988888765321
Q ss_pred ccccccCCCCccccCCCCCCCCCCcCCCccccC--Cc-chHHHHHHHhhccC--CcEEEEcCccccCHHHHHHhhcCCCC
Q 045570 160 ISTVFESSDDELLIPGITSPVPVCVMPSCLFNK--DG-GHATLVKLAQRFKD--VDGIIVNTFHELEPYAVNAFSGDLNP 234 (468)
Q Consensus 160 ~~~~~~~~~~~~~~p~~~~~~~~~~l~~~~~~~--~~-~~~~~~~~~~~~~~--~~~~~~~s~~~l~~~~~~~~~~~~~p 234 (468)
......+|+++ +++..++|..+... .. ....+.+..+.... .+++++|||++||+.++..+.. .
T Consensus 151 -------~~~~~~iPglp-~l~~~dlp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vlvNTf~eLE~~~~~~l~~---~ 219 (455)
T PLN02152 151 -------NNSVFEFPNLP-SLEIRDLPSFLSPSNTNKAAQAVYQELMEFLKEESNPKILVNTFDSLEPEFLTAIPN---I 219 (455)
T ss_pred -------CCCeeecCCCC-CCchHHCchhhcCCCCchhHHHHHHHHHHHhhhccCCEEEEeChHHhhHHHHHhhhc---C
Confidence 01234588886 57788888866432 11 23444455554432 4699999999999999998865 2
Q ss_pred CeEEeccccCCCC--CCC-C-CCC-hhcHhHHHHhhhcCCCCcEEEEeccCccccCHHHHHHHHHHHHhCCCcEEEEEec
Q 045570 235 PLYTAGPVLHLKS--QPN-P-DLD-EAQYQKIFQWLDDLAESSVVFLCFGSSGSFDVAQVKEIAIGLERSGYNFLWSLRV 309 (468)
Q Consensus 235 ~v~~vGpl~~~~~--~~~-~-~~~-~~~~~~~~~~l~~~~~~~vv~vs~GS~~~~~~~~~~~~~~al~~~~~~~iw~~~~ 309 (468)
+++.|||+.+... ... . +.. ...+++|.+|||++++++||||||||+...+.+++++|+.+|+.++++|||+++.
T Consensus 220 ~v~~VGPL~~~~~~~~~~~~~~~~~~~~~~~~~~wLd~~~~~sVvyvsfGS~~~l~~~q~~ela~gL~~s~~~flWv~r~ 299 (455)
T PLN02152 220 EMVAVGPLLPAEIFTGSESGKDLSVRDQSSSYTLWLDSKTESSVIYVSFGTMVELSKKQIEELARALIEGKRPFLWVITD 299 (455)
T ss_pred CEEEEcccCccccccccccCccccccccchHHHHHhhCCCCCceEEEEecccccCCHHHHHHHHHHHHHcCCCeEEEEec
Confidence 6999999975321 000 0 000 1234579999999988899999999999999999999999999999999999985
Q ss_pred CCCCCccccccccCCCCCCchhHHHHhcCCeEEEEeccHHHhhhccccceeeeccCchhHHHHHhcCCcEEeccCccccc
Q 045570 310 SSPKDEVSAHRYVTNNGVFPEGFLERIKGRGMIWGWVPQVEILAHKAIGGFVSHCGWNSILESLWYGVPIATWPIYAEQQ 389 (468)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~v~~~vpq~~iL~~~~~~~~i~HgG~~s~~eal~~GvP~v~~P~~~DQ~ 389 (468)
......... ...+....+|++|+|+.++|+++++|+||.+||+|+++|+|||||||||++|++++|||||++|+++||+
T Consensus 300 ~~~~~~~~~-~~~~~~~~~~~~f~e~~~~~g~v~~W~PQ~~iL~h~~vg~fvtH~G~nS~~Ea~~~GvP~l~~P~~~DQ~ 378 (455)
T PLN02152 300 KLNREAKIE-GEEETEIEKIAGFRHELEEVGMIVSWCSQIEVLRHRAVGCFVTHCGWSSSLESLVLGVPVVAFPMWSDQP 378 (455)
T ss_pred Ccccccccc-cccccccccchhHHHhccCCeEEEeeCCHHHHhCCcccceEEeeCCcccHHHHHHcCCCEEeccccccch
Confidence 321100000 0000001257899999999999999999999999999999999999999999999999999999999999
Q ss_pred hhHHHHHhhhceEEEeeeccccCCcccChhHHHHHHHHHhcCcH--HHHHHHHHHHHHHHHhhhcCCChHHHHHHHHHhh
Q 045570 390 LNAFRMVKELGLALDLRLDYRVGSDLVMAGDIESAVRCLMDGEN--KIRKKVKEMAEISRKSLMEGGSSFNSIGQFISLN 467 (468)
Q Consensus 390 ~na~~~~~~~G~G~~~~~~~~~~~~~~~~~~l~~av~~vl~~~~--~~~~~a~~l~~~~~~~~~~gg~~~~~~~~~~~~~ 467 (468)
.||+++++.||+|+.+..+. .+.+++++|+++|+++|+ |+ +||+||+++++++++++.+||||+.++++||++|
T Consensus 379 ~na~~~~~~~~~G~~~~~~~---~~~~~~e~l~~av~~vm~-~~~~~~r~~a~~~~~~~~~a~~~ggsS~~nl~~li~~i 454 (455)
T PLN02152 379 ANAKLLEEIWKTGVRVRENS---EGLVERGEIRRCLEAVME-EKSVELRESAEKWKRLAIEAGGEGGSSDKNVEAFVKTL 454 (455)
T ss_pred HHHHHHHHHhCceEEeecCc---CCcCcHHHHHHHHHHHHh-hhHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHh
Confidence 99999999888888875421 235799999999999997 44 6999999999999999999999999999999987
No 10
>PLN02562 UDP-glycosyltransferase
Probab=100.00 E-value=1.1e-70 Score=543.40 Aligned_cols=430 Identities=19% Similarity=0.335 Sum_probs=332.6
Q ss_pred CcEEEEEcCCCCCChHHHHHHHHHHHhCCCCeEEEEEecCCCCChhhhhhhcccCCCCCCeEEEeCCCCCCCCCCCcCCC
Q 045570 3 KAELIFVPSPGIGHLVSTLEFAKHLTDRDDRISVTILSMKLAVAPWVDAYTKSLTDSQPRICVIDLPPVDPPLPDVLKKS 82 (468)
Q Consensus 3 k~~i~~~~~p~~GH~~P~l~La~~L~~rGH~~~Vt~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 82 (468)
++||+++|+|++||++||++||+.|+.+|+. ||+++++.+... +.......++++++.+|++.+.+. ..+
T Consensus 6 ~~HVVlvPfPaqGHi~PmL~LAk~Las~G~~--VT~vtt~~~~~~-----~~~~~~~~~~i~~v~lp~g~~~~~---~~~ 75 (448)
T PLN02562 6 RPKIILVPYPAQGHVTPMLKLASAFLSRGFE--PVVITPEFIHRR-----ISATLDPKLGITFMSISDGQDDDP---PRD 75 (448)
T ss_pred CcEEEEEcCccccCHHHHHHHHHHHHhCCCE--EEEEeCcchhhh-----hhhccCCCCCEEEEECCCCCCCCc---ccc
Confidence 6699999999999999999999999999976 999999854321 111111123699999987654322 112
Q ss_pred hHHHHHHHHHhhchhHHHHHHhhhccCCCCccEEEEcCCcchHHHHHHHcCCCeEEEeCchhHHHHHHhhhhcccccccc
Q 045570 83 PEYFISLVVESHLPNVKNIVSSRSNSGSLQVTGLVLDFFCVSMVDIAKELSLPSYMFLTSNMGFLRLMLYLPTRQDRIST 162 (468)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~D~vv~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (468)
...++..+...+.+.++++++++.. ..+++|||+|.+++|+..+|+++|||++.|+++++..++.+++.+.....+..
T Consensus 76 ~~~l~~a~~~~~~~~l~~ll~~l~~--~~pv~cvI~D~~~~w~~~vA~~~giP~~~f~~~~a~~~~~~~~~~~~~~~~~~ 153 (448)
T PLN02562 76 FFSIENSMENTMPPQLERLLHKLDE--DGEVACMVVDLLASWAIGVADRCGVPVAGFWPVMLAAYRLIQAIPELVRTGLI 153 (448)
T ss_pred HHHHHHHHHHhchHHHHHHHHHhcC--CCCcEEEEECCccHhHHHHHHHhCCCEEEEechhHHHHHHHHHHHHHhhcccc
Confidence 2222333333456667777666522 12468999999999999999999999999999999888877665433222211
Q ss_pred c-ccCC--CCc-cccCCCCCCCCCCcCCCccccC--C-cchHHHHHHHhhccCCcEEEEcCccccCHHHHHHhhc----C
Q 045570 163 V-FESS--DDE-LLIPGITSPVPVCVMPSCLFNK--D-GGHATLVKLAQRFKDVDGIIVNTFHELEPYAVNAFSG----D 231 (468)
Q Consensus 163 ~-~~~~--~~~-~~~p~~~~~~~~~~l~~~~~~~--~-~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~~~~~~----~ 231 (468)
. .+.+ ..+ ..+|+++ +++..+++..+... . ..+..+.+......+++++++|||++||+.++..+.. .
T Consensus 154 ~~~~~~~~~~~~~~~Pg~~-~l~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vlvNTf~eLE~~~~~~~~~~~~~~ 232 (448)
T PLN02562 154 SETGCPRQLEKICVLPEQP-LLSTEDLPWLIGTPKARKARFKFWTRTLERTKSLRWILMNSFKDEEYDDVKNHQASYNNG 232 (448)
T ss_pred ccccccccccccccCCCCC-CCChhhCcchhcCCCcchHHHHHHHHHHhccccCCEEEEcChhhhCHHHHHHHHhhhccc
Confidence 1 1101 111 2578875 57778888755322 1 1255666777777788999999999999988876653 2
Q ss_pred CCCCeEEeccccCCCCCCCCCCC-hhcHhHHHHhhhcCCCCcEEEEeccCcc-ccCHHHHHHHHHHHHhCCCcEEEEEec
Q 045570 232 LNPPLYTAGPVLHLKSQPNPDLD-EAQYQKIFQWLDDLAESSVVFLCFGSSG-SFDVAQVKEIAIGLERSGYNFLWSLRV 309 (468)
Q Consensus 232 ~~p~v~~vGpl~~~~~~~~~~~~-~~~~~~~~~~l~~~~~~~vv~vs~GS~~-~~~~~~~~~~~~al~~~~~~~iw~~~~ 309 (468)
..|+++.|||++........... .+.+.+|.+|||++++++||||||||+. ..+.+++++++.+|+..+++|||+++.
T Consensus 233 ~~~~v~~iGpl~~~~~~~~~~~~~~~~~~~c~~wLd~~~~~svvyvsfGS~~~~~~~~~~~~l~~~l~~~g~~fiW~~~~ 312 (448)
T PLN02562 233 QNPQILQIGPLHNQEATTITKPSFWEEDMSCLGWLQEQKPNSVIYISFGSWVSPIGESNVRTLALALEASGRPFIWVLNP 312 (448)
T ss_pred cCCCEEEecCcccccccccCCCccccchHHHHHHHhcCCCCceEEEEecccccCCCHHHHHHHHHHHHHCCCCEEEEEcC
Confidence 45789999999764321000000 1234678899999988899999999986 678999999999999999999999975
Q ss_pred CCCCCccccccccCCCCCCchhHHHHhcCCeEEEEeccHHHhhhccccceeeeccCchhHHHHHhcCCcEEeccCccccc
Q 045570 310 SSPKDEVSAHRYVTNNGVFPEGFLERIKGRGMIWGWVPQVEILAHKAIGGFVSHCGWNSILESLWYGVPIATWPIYAEQQ 389 (468)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~v~~~vpq~~iL~~~~~~~~i~HgG~~s~~eal~~GvP~v~~P~~~DQ~ 389 (468)
+. ...+|++|+++.++|+++++|+||.+||+|+++++|||||||||++||+++|||||++|+++||+
T Consensus 313 ~~-------------~~~l~~~~~~~~~~~~~v~~w~PQ~~iL~h~~v~~fvtH~G~nS~~Eal~~GvP~l~~P~~~DQ~ 379 (448)
T PLN02562 313 VW-------------REGLPPGYVERVSKQGKVVSWAPQLEVLKHQAVGCYLTHCGWNSTMEAIQCQKRLLCYPVAGDQF 379 (448)
T ss_pred Cc-------------hhhCCHHHHHHhccCEEEEecCCHHHHhCCCccceEEecCcchhHHHHHHcCCCEEeCCcccchH
Confidence 31 13488899999999999999999999999999999999999999999999999999999999999
Q ss_pred hhHHHHHhhhceEEEeeeccccCCcccChhHHHHHHHHHhcCcHHHHHHHHHHHHHHHHhhhcCCChHHHHHHHHHhhC
Q 045570 390 LNAFRMVKELGLALDLRLDYRVGSDLVMAGDIESAVRCLMDGENKIRKKVKEMAEISRKSLMEGGSSFNSIGQFISLNF 468 (468)
Q Consensus 390 ~na~~~~~~~G~G~~~~~~~~~~~~~~~~~~l~~av~~vl~~~~~~~~~a~~l~~~~~~~~~~gg~~~~~~~~~~~~~~ 468 (468)
.||+++++.||+|+.+. .+++++|+++|+++|+ |++||+||++++++++++ ++||||..++++||+++.
T Consensus 380 ~na~~~~~~~g~g~~~~--------~~~~~~l~~~v~~~l~-~~~~r~~a~~l~~~~~~~-~~gGSS~~nl~~~v~~~~ 448 (448)
T PLN02562 380 VNCAYIVDVWKIGVRIS--------GFGQKEVEEGLRKVME-DSGMGERLMKLRERAMGE-EARLRSMMNFTTLKDELK 448 (448)
T ss_pred HHHHHHHHHhCceeEeC--------CCCHHHHHHHHHHHhC-CHHHHHHHHHHHHHHHhc-CCCCCHHHHHHHHHHHhC
Confidence 99999988789998875 5799999999999998 799999999999999887 678999999999999873
No 11
>PLN02173 UDP-glucosyl transferase family protein
Probab=100.00 E-value=1.4e-70 Score=538.29 Aligned_cols=426 Identities=25% Similarity=0.426 Sum_probs=334.0
Q ss_pred CcEEEEEcCCCCCChHHHHHHHHHHHhCCCCeEEEEEecCCCCChhhhhhhcccCCCCCCeEEEeCCCCCCCC-CCCcCC
Q 045570 3 KAELIFVPSPGIGHLVSTLEFAKHLTDRDDRISVTILSMKLAVAPWVDAYTKSLTDSQPRICVIDLPPVDPPL-PDVLKK 81 (468)
Q Consensus 3 k~~i~~~~~p~~GH~~P~l~La~~L~~rGH~~~Vt~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~-~~~~~~ 81 (468)
++||+++|+|++||++||++||+.|+.+|+. |||++++.+++.. .. ...++|+++.++++.|++ .+. ..
T Consensus 5 ~~hvv~~P~paqGHi~P~l~lAk~La~~G~~--vT~v~t~~~~~~~-----~~--~~~~~i~~~~ipdglp~~~~~~-~~ 74 (449)
T PLN02173 5 RGHVLAVPFPSQGHITPIRQFCKRLHSKGFK--TTHTLTTFIFNTI-----HL--DPSSPISIATISDGYDQGGFSS-AG 74 (449)
T ss_pred CcEEEEecCcccccHHHHHHHHHHHHcCCCE--EEEEECCchhhhc-----cc--CCCCCEEEEEcCCCCCCccccc-cc
Confidence 4599999999999999999999999999955 9999998543321 10 112359999999876653 222 22
Q ss_pred ChHHHHHHHHHhhchhHHHHHHhhhccCCCCccEEEEcCCcchHHHHHHHcCCCeEEEeCchhHHHHHHhhhhccccccc
Q 045570 82 SPEYFISLVVESHLPNVKNIVSSRSNSGSLQVTGLVLDFFCVSMVDIAKELSLPSYMFLTSNMGFLRLMLYLPTRQDRIS 161 (468)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~D~vv~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~ 161 (468)
++..++..+.+.+.+.+++++++...+ ..+.+|||+|.+++|+..+|+++|||++.|++++++.+..+++. .+ ..
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~Pv~cvV~D~f~~Wa~dVA~elgIP~v~F~~~~a~~~~~~~~~-~~-~~-- 149 (449)
T PLN02173 75 SVPEYLQNFKTFGSKTVADIIRKHQST-DNPITCIVYDSFMPWALDLAREFGLAAAPFFTQSCAVNYINYLS-YI-NN-- 149 (449)
T ss_pred CHHHHHHHHHHhhhHHHHHHHHHhhcc-CCCceEEEECCcchhHHHHHHHhCCCEEEEechHHHHHHHHHhH-Hh-cc--
Confidence 344555555556677777777765321 12349999999999999999999999999999998877666542 11 11
Q ss_pred ccccCCCCccccCCCCCCCCCCcCCCccccCCc---chHHHHHHHhhccCCcEEEEcCccccCHHHHHHhhcCCCCCeEE
Q 045570 162 TVFESSDDELLIPGITSPVPVCVMPSCLFNKDG---GHATLVKLAQRFKDVDGIIVNTFHELEPYAVNAFSGDLNPPLYT 238 (468)
Q Consensus 162 ~~~~~~~~~~~~p~~~~~~~~~~l~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~~~~~~~~~p~v~~ 238 (468)
......+|+++ +++..+++..+..... .+..+.+......+++++++|||++||+.++..+.. .++++.
T Consensus 150 -----~~~~~~~pg~p-~l~~~dlp~~~~~~~~~~~~~~~~~~~~~~~~~~~~vlvNTf~eLE~~~~~~~~~--~~~v~~ 221 (449)
T PLN02173 150 -----GSLTLPIKDLP-LLELQDLPTFVTPTGSHLAYFEMVLQQFTNFDKADFVLVNSFHDLDLHENELLSK--VCPVLT 221 (449)
T ss_pred -----CCccCCCCCCC-CCChhhCChhhcCCCCchHHHHHHHHHHhhhccCCEEEEeCHHHhhHHHHHHHHh--cCCeeE
Confidence 11234478886 5777888876653211 234566666777888999999999999999988864 257999
Q ss_pred eccccCCCC---C--CCCCC--C-h--hcHhHHHHhhhcCCCCcEEEEeccCccccCHHHHHHHHHHHHhCCCcEEEEEe
Q 045570 239 AGPVLHLKS---Q--PNPDL--D-E--AQYQKIFQWLDDLAESSVVFLCFGSSGSFDVAQVKEIAIGLERSGYNFLWSLR 308 (468)
Q Consensus 239 vGpl~~~~~---~--~~~~~--~-~--~~~~~~~~~l~~~~~~~vv~vs~GS~~~~~~~~~~~~~~al~~~~~~~iw~~~ 308 (468)
|||+++... . ..... . + ..+++|.+|||.+++++||||||||+...+.+++.+++.+| .+.+|||+++
T Consensus 222 VGPl~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~WLd~~~~~svvyvsfGS~~~~~~~~~~ela~gL--s~~~flWvvr 299 (449)
T PLN02173 222 IGPTVPSMYLDQQIKSDNDYDLNLFDLKEAALCTDWLDKRPQGSVVYIAFGSMAKLSSEQMEEIASAI--SNFSYLWVVR 299 (449)
T ss_pred EcccCchhhccccccccccccccccccccchHHHHHHhcCCCCceEEEEecccccCCHHHHHHHHHHh--cCCCEEEEEe
Confidence 999974210 0 00000 0 0 12356999999999899999999999999999999999999 7888999998
Q ss_pred cCCCCCccccccccCCCCCCchhHHHHh-cCCeEEEEeccHHHhhhccccceeeeccCchhHHHHHhcCCcEEeccCccc
Q 045570 309 VSSPKDEVSAHRYVTNNGVFPEGFLERI-KGRGMIWGWVPQVEILAHKAIGGFVSHCGWNSILESLWYGVPIATWPIYAE 387 (468)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~lp~~~~~~~-~~~~~v~~~vpq~~iL~~~~~~~~i~HgG~~s~~eal~~GvP~v~~P~~~D 387 (468)
... .+.+|++|+++. ++|+++++|+||.+||+|+++++|||||||||++||+++|||||++|+++|
T Consensus 300 ~~~-------------~~~lp~~~~~~~~~~~~~i~~W~PQ~~iL~H~~v~~FvtHcGwnS~~Eai~~GVP~l~~P~~~D 366 (449)
T PLN02173 300 ASE-------------ESKLPPGFLETVDKDKSLVLKWSPQLQVLSNKAIGCFMTHCGWNSTMEGLSLGVPMVAMPQWTD 366 (449)
T ss_pred ccc-------------hhcccchHHHhhcCCceEEeCCCCHHHHhCCCccceEEecCccchHHHHHHcCCCEEecCchhc
Confidence 531 134888998887 578999999999999999999999999999999999999999999999999
Q ss_pred cchhHHHHHhhhceEEEeeeccccCCcccChhHHHHHHHHHhcCc--HHHHHHHHHHHHHHHHhhhcCCChHHHHHHHHH
Q 045570 388 QQLNAFRMVKELGLALDLRLDYRVGSDLVMAGDIESAVRCLMDGE--NKIRKKVKEMAEISRKSLMEGGSSFNSIGQFIS 465 (468)
Q Consensus 388 Q~~na~~~~~~~G~G~~~~~~~~~~~~~~~~~~l~~av~~vl~~~--~~~~~~a~~l~~~~~~~~~~gg~~~~~~~~~~~ 465 (468)
|+.||+++++.||+|+.+..++. ++.+++++|+++|+++|+++ +++|+||+++++++++++.+||||.+++++||+
T Consensus 367 Q~~Na~~v~~~~g~Gv~v~~~~~--~~~~~~e~v~~av~~vm~~~~~~~~r~~a~~~~~~a~~Av~~gGSS~~~l~~~v~ 444 (449)
T PLN02173 367 QPMNAKYIQDVWKVGVRVKAEKE--SGIAKREEIEFSIKEVMEGEKSKEMKENAGKWRDLAVKSLSEGGSTDININTFVS 444 (449)
T ss_pred chHHHHHHHHHhCceEEEeeccc--CCcccHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHH
Confidence 99999999998999999875321 23579999999999999743 489999999999999999999999999999999
Q ss_pred hhC
Q 045570 466 LNF 468 (468)
Q Consensus 466 ~~~ 468 (468)
++.
T Consensus 445 ~~~ 447 (449)
T PLN02173 445 KIQ 447 (449)
T ss_pred Hhc
Confidence 873
No 12
>PLN02555 limonoid glucosyltransferase
Probab=100.00 E-value=2.3e-70 Score=541.16 Aligned_cols=449 Identities=22% Similarity=0.359 Sum_probs=340.8
Q ss_pred CcEEEEEcCCCCCChHHHHHHHHHHHhCCCCeEEEEEecCCCCChhhh--hhhccc-C-CCCCCeEEEeCCCCCCCCCCC
Q 045570 3 KAELIFVPSPGIGHLVSTLEFAKHLTDRDDRISVTILSMKLAVAPWVD--AYTKSL-T-DSQPRICVIDLPPVDPPLPDV 78 (468)
Q Consensus 3 k~~i~~~~~p~~GH~~P~l~La~~L~~rGH~~~Vt~~~~~~~~~~~~~--~~~~~~-~-~~~~~i~~~~~~~~~~~~~~~ 78 (468)
++||+++|+|++||++||+.||+.|+.+| +.|||++++.++..... ...+.. . .....++|..++++.|++.+.
T Consensus 7 ~~HVv~~PfpaqGHi~Pml~lA~~La~~G--~~vT~v~T~~~~~~~~~a~~~~~~~~~~~~~~~i~~~~~pdglp~~~~~ 84 (480)
T PLN02555 7 LVHVMLVSFPGQGHVNPLLRLGKLLASKG--LLVTFVTTESWGKKMRQANKIQDGVLKPVGDGFIRFEFFEDGWAEDDPR 84 (480)
T ss_pred CCEEEEECCcccccHHHHHHHHHHHHhCC--CeEEEEeccchhhhhhccccccccccccCCCCeEEEeeCCCCCCCCccc
Confidence 68999999999999999999999999999 55999999854432110 000100 0 001236777777766554332
Q ss_pred cCCChHHHHHHHHHhhchhHHHHHHhhhccCCCCccEEEEcCCcchHHHHHHHcCCCeEEEeCchhHHHHHHhhhhcccc
Q 045570 79 LKKSPEYFISLVVESHLPNVKNIVSSRSNSGSLQVTGLVLDFFCVSMVDIAKELSLPSYMFLTSNMGFLRLMLYLPTRQD 158 (468)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~D~vv~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~~ 158 (468)
..+...++..+...+.+.++++++++.. ...+++|||+|.++.|+..+|+++|||.+.|++++++.++.+++.+....
T Consensus 85 -~~~~~~~~~~~~~~~~~~l~~~l~~~~~-~~~pv~ciV~D~~~~wa~~vA~~~gIP~~~F~t~~a~~~~~~~~~~~~~~ 162 (480)
T PLN02555 85 -RQDLDLYLPQLELVGKREIPNLVKRYAE-QGRPVSCLINNPFIPWVCDVAEELGIPSAVLWVQSCACFSAYYHYYHGLV 162 (480)
T ss_pred -ccCHHHHHHHHHHhhhHHHHHHHHHHhc-cCCCceEEEECCcchHHHHHHHHcCCCeEEeecccHHHHHHHHHHhhcCC
Confidence 1234444444444566677777766532 12245999999999999999999999999999999998888877532100
Q ss_pred cccccccCCCCccccCCCCCCCCCCcCCCccccCC---cchHHHHHHHhhccCCcEEEEcCccccCHHHHHHhhcCCCCC
Q 045570 159 RISTVFESSDDELLIPGITSPVPVCVMPSCLFNKD---GGHATLVKLAQRFKDVDGIIVNTFHELEPYAVNAFSGDLNPP 235 (468)
Q Consensus 159 ~~~~~~~~~~~~~~~p~~~~~~~~~~l~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~~~~~~~~~p~ 235 (468)
. .......+.++.+|++| +++..+++..+.... ..+..+.+......+++++++|||++||+.++..+.. ..|
T Consensus 163 ~-~~~~~~~~~~~~iPglp-~l~~~dlp~~~~~~~~~~~~~~~~~~~~~~~~~a~~vlvNTf~eLE~~~~~~l~~-~~~- 238 (480)
T PLN02555 163 P-FPTETEPEIDVQLPCMP-LLKYDEIPSFLHPSSPYPFLRRAILGQYKNLDKPFCILIDTFQELEKEIIDYMSK-LCP- 238 (480)
T ss_pred C-cccccCCCceeecCCCC-CcCHhhCcccccCCCCchHHHHHHHHHHHhcccCCEEEEEchHHHhHHHHHHHhh-CCC-
Confidence 0 00011112335689986 688888887664321 1244556666677788999999999999999988865 234
Q ss_pred eEEeccccCCCCCC-CC-CCC-hhcHhHHHHhhhcCCCCcEEEEeccCccccCHHHHHHHHHHHHhCCCcEEEEEecCCC
Q 045570 236 LYTAGPVLHLKSQP-NP-DLD-EAQYQKIFQWLDDLAESSVVFLCFGSSGSFDVAQVKEIAIGLERSGYNFLWSLRVSSP 312 (468)
Q Consensus 236 v~~vGpl~~~~~~~-~~-~~~-~~~~~~~~~~l~~~~~~~vv~vs~GS~~~~~~~~~~~~~~al~~~~~~~iw~~~~~~~ 312 (468)
++.|||++...... .. ... +..+++|.+|||++++++||||||||+...+.+++.+++.+|+..+++|||+++....
T Consensus 239 v~~iGPl~~~~~~~~~~~~~~~~~~~~~~~~wLd~~~~~sVvyvsfGS~~~~~~~q~~ela~~l~~~~~~flW~~~~~~~ 318 (480)
T PLN02555 239 IKPVGPLFKMAKTPNSDVKGDISKPADDCIEWLDSKPPSSVVYISFGTVVYLKQEQIDEIAYGVLNSGVSFLWVMRPPHK 318 (480)
T ss_pred EEEeCcccCccccccccccccccccchhHHHHHhCCCCCceeEEEeccccCCCHHHHHHHHHHHHhcCCeEEEEEecCcc
Confidence 99999997532111 10 010 2345689999999988899999999999999999999999999999999999984310
Q ss_pred CCccccccccCCCCCCchhHHHHhcCCeEEEEeccHHHhhhccccceeeeccCchhHHHHHhcCCcEEeccCccccchhH
Q 045570 313 KDEVSAHRYVTNNGVFPEGFLERIKGRGMIWGWVPQVEILAHKAIGGFVSHCGWNSILESLWYGVPIATWPIYAEQQLNA 392 (468)
Q Consensus 313 ~~~~~~~~~~~~~~~lp~~~~~~~~~~~~v~~~vpq~~iL~~~~~~~~i~HgG~~s~~eal~~GvP~v~~P~~~DQ~~na 392 (468)
.. ......+|+++.++.++|+++++|+||.+||.|+++++|||||||||++||+++|||||++|+++||+.||
T Consensus 319 ~~-------~~~~~~lp~~~~~~~~~~g~v~~W~PQ~~iL~H~~v~~FvtH~G~nS~~Eai~~GVP~l~~P~~~DQ~~Na 391 (480)
T PLN02555 319 DS-------GVEPHVLPEEFLEKAGDKGKIVQWCPQEKVLAHPSVACFVTHCGWNSTMEALSSGVPVVCFPQWGDQVTDA 391 (480)
T ss_pred cc-------cchhhcCChhhhhhcCCceEEEecCCHHHHhCCCccCeEEecCCcchHHHHHHcCCCEEeCCCccccHHHH
Confidence 00 00013578899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhhceEEEeeeccccCCcccChhHHHHHHHHHhcCc--HHHHHHHHHHHHHHHHhhhcCCChHHHHHHHHHhh
Q 045570 393 FRMVKELGLALDLRLDYRVGSDLVMAGDIESAVRCLMDGE--NKIRKKVKEMAEISRKSLMEGGSSFNSIGQFISLN 467 (468)
Q Consensus 393 ~~~~~~~G~G~~~~~~~~~~~~~~~~~~l~~av~~vl~~~--~~~~~~a~~l~~~~~~~~~~gg~~~~~~~~~~~~~ 467 (468)
+++++.||+|+.+.+.+. +.+.+++++|+++|+++|+++ +++|+||++|+++.++++.+||||+.++++||+++
T Consensus 392 ~~~~~~~gvGv~l~~~~~-~~~~v~~~~v~~~v~~vm~~~~g~~~r~ra~~l~~~a~~A~~egGSS~~~l~~~v~~i 467 (480)
T PLN02555 392 VYLVDVFKTGVRLCRGEA-ENKLITREEVAECLLEATVGEKAAELKQNALKWKEEAEAAVAEGGSSDRNFQEFVDKL 467 (480)
T ss_pred HHHHHHhCceEEccCCcc-ccCcCcHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHH
Confidence 999999999999953110 124789999999999999742 48999999999999999999999999999999987
No 13
>PLN02863 UDP-glucoronosyl/UDP-glucosyl transferase family protein
Probab=100.00 E-value=4e-70 Score=541.37 Aligned_cols=442 Identities=25% Similarity=0.441 Sum_probs=329.7
Q ss_pred CCcEEEEEcCCCCCChHHHHHHHHHHHhCCCCeEEEEEecCCCCChhhhhhhcccCCCCCCeEEEeCCCC----CCCCCC
Q 045570 2 KKAELIFVPSPGIGHLVSTLEFAKHLTDRDDRISVTILSMKLAVAPWVDAYTKSLTDSQPRICVIDLPPV----DPPLPD 77 (468)
Q Consensus 2 ~k~~i~~~~~p~~GH~~P~l~La~~L~~rGH~~~Vt~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~----~~~~~~ 77 (468)
.++||+++|+|++||++||++||+.|+.+|+. |||++++.++.. +.......++++++.++.+ .|++.+
T Consensus 8 ~~~HVvl~PfpaqGHi~P~l~LAk~La~~G~~--VTfv~T~~n~~~-----~~~~~~~~~~i~~~~lp~P~~~~lPdG~~ 80 (477)
T PLN02863 8 AGTHVLVFPFPAQGHMIPLLDLTHRLALRGLT--ITVLVTPKNLPF-----LNPLLSKHPSIETLVLPFPSHPSIPSGVE 80 (477)
T ss_pred CCCEEEEecCcccchHHHHHHHHHHHHhCCCE--EEEEeCCCcHHH-----HhhhcccCCCeeEEeCCCCCcCCCCCCCc
Confidence 47899999999999999999999999999955 999999865432 1211111235888776642 244443
Q ss_pred CcCCChHH---HHHHHHHhhchhHHHHHHhhhccCCCCccEEEEcCCcchHHHHHHHcCCCeEEEeCchhHHHHHHhhhh
Q 045570 78 VLKKSPEY---FISLVVESHLPNVKNIVSSRSNSGSLQVTGLVLDFFCVSMVDIAKELSLPSYMFLTSNMGFLRLMLYLP 154 (468)
Q Consensus 78 ~~~~~~~~---~~~~~~~~~~~~~~~~l~~~~~~~~~~~D~vv~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~ 154 (468)
........ .+........+.+.+.+++. ..+++|||+|.+++|+..+|+++|||++.|++++++.++.+++..
T Consensus 81 ~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~----~~~p~cvI~D~f~~Wa~dVA~e~GIP~~~F~t~sA~~~~~~~~~~ 156 (477)
T PLN02863 81 NVKDLPPSGFPLMIHALGELYAPLLSWFRSH----PSPPVAIISDMFLGWTQNLACQLGIRRFVFSPSGAMALSIMYSLW 156 (477)
T ss_pred ChhhcchhhHHHHHHHHHHhHHHHHHHHHhC----CCCCeEEEEcCchHhHHHHHHHcCCCEEEEeccCHHHHHHHHHHh
Confidence 22111111 22222233344444444432 246799999999999999999999999999999999999888764
Q ss_pred cccccccccccCCCCc---cccCCCCCCCCCCcCCCccccC---CcchHHHHHHHhhccCCcEEEEcCccccCHHHHHHh
Q 045570 155 TRQDRISTVFESSDDE---LLIPGITSPVPVCVMPSCLFNK---DGGHATLVKLAQRFKDVDGIIVNTFHELEPYAVNAF 228 (468)
Q Consensus 155 ~~~~~~~~~~~~~~~~---~~~p~~~~~~~~~~l~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~~~~ 228 (468)
...... ....+.... ..+|+++ +++..+++..+... ......+.+.....+..+++++|||++||+.++..+
T Consensus 157 ~~~~~~-~~~~~~~~~~~~~~iPg~~-~~~~~dlp~~~~~~~~~~~~~~~~~~~~~~~~~~~~vlvNTf~eLE~~~~~~~ 234 (477)
T PLN02863 157 REMPTK-INPDDQNEILSFSKIPNCP-KYPWWQISSLYRSYVEGDPAWEFIKDSFRANIASWGLVVNSFTELEGIYLEHL 234 (477)
T ss_pred hccccc-ccccccccccccCCCCCCC-CcChHhCchhhhccCccchHHHHHHHHHhhhccCCEEEEecHHHHHHHHHHHH
Confidence 211000 000011111 2467775 67778888655421 102233444444456778999999999999999998
Q ss_pred hcCCC-CCeEEeccccCCCCCCC---C-CC-ChhcHhHHHHhhhcCCCCcEEEEeccCccccCHHHHHHHHHHHHhCCCc
Q 045570 229 SGDLN-PPLYTAGPVLHLKSQPN---P-DL-DEAQYQKIFQWLDDLAESSVVFLCFGSSGSFDVAQVKEIAIGLERSGYN 302 (468)
Q Consensus 229 ~~~~~-p~v~~vGpl~~~~~~~~---~-~~-~~~~~~~~~~~l~~~~~~~vv~vs~GS~~~~~~~~~~~~~~al~~~~~~ 302 (468)
..... +++++|||++....... . .. ....+++|.+|||.+++++||||||||+...+.+++.+++.+|+.++++
T Consensus 235 ~~~~~~~~v~~IGPL~~~~~~~~~~~~~~~~~~~~~~~~~~WLd~~~~~svVyvsfGS~~~~~~~~~~ela~gL~~~~~~ 314 (477)
T PLN02863 235 KKELGHDRVWAVGPILPLSGEKSGLMERGGPSSVSVDDVMTWLDTCEDHKVVYVCFGSQVVLTKEQMEALASGLEKSGVH 314 (477)
T ss_pred HhhcCCCCeEEeCCCcccccccccccccCCcccccHHHHHHHHhcCCCCceEEEEeeceecCCHHHHHHHHHHHHhCCCc
Confidence 76432 67999999975331100 0 00 0113568999999998899999999999999999999999999999999
Q ss_pred EEEEEecCCCCCccccccccCCCCCCchhHHHHhcCCeEEE-EeccHHHhhhccccceeeeccCchhHHHHHhcCCcEEe
Q 045570 303 FLWSLRVSSPKDEVSAHRYVTNNGVFPEGFLERIKGRGMIW-GWVPQVEILAHKAIGGFVSHCGWNSILESLWYGVPIAT 381 (468)
Q Consensus 303 ~iw~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~v~-~~vpq~~iL~~~~~~~~i~HgG~~s~~eal~~GvP~v~ 381 (468)
|||+++..... ......+|++|.++..+++.++ +|+||.+||+|+++++|||||||||++||+++|||||+
T Consensus 315 flw~~~~~~~~--------~~~~~~lp~~~~~r~~~~g~~v~~w~PQ~~vL~h~~v~~fvtH~G~nS~~Eal~~GvP~l~ 386 (477)
T PLN02863 315 FIWCVKEPVNE--------ESDYSNIPSGFEDRVAGRGLVIRGWAPQVAILSHRAVGAFLTHCGWNSVLEGLVAGVPMLA 386 (477)
T ss_pred EEEEECCCccc--------ccchhhCCHHHHHHhccCCEEecCCCCHHHHhcCCCcCeEEecCCchHHHHHHHcCCCEEe
Confidence 99999853110 0011358899988887666555 99999999999999999999999999999999999999
Q ss_pred ccCccccchhHHHHHhhhceEEEeeeccccCCcccChhHHHHHHHHHhcCcHHHHHHHHHHHHHHHHhhhcCCChHHHHH
Q 045570 382 WPIYAEQQLNAFRMVKELGLALDLRLDYRVGSDLVMAGDIESAVRCLMDGENKIRKKVKEMAEISRKSLMEGGSSFNSIG 461 (468)
Q Consensus 382 ~P~~~DQ~~na~~~~~~~G~G~~~~~~~~~~~~~~~~~~l~~av~~vl~~~~~~~~~a~~l~~~~~~~~~~gg~~~~~~~ 461 (468)
+|+++||+.||+++++.||+|+++..+ ..+.++++++.++|+++|.++++||+||+++++++++++.+||||+++++
T Consensus 387 ~P~~~DQ~~na~~v~~~~gvG~~~~~~---~~~~~~~~~v~~~v~~~m~~~~~~r~~a~~l~e~a~~Av~~gGSS~~~l~ 463 (477)
T PLN02863 387 WPMAADQFVNASLLVDELKVAVRVCEG---ADTVPDSDELARVFMESVSENQVERERAKELRRAALDAIKERGSSVKDLD 463 (477)
T ss_pred CCccccchhhHHHHHHhhceeEEeccC---CCCCcCHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHhccCCcHHHHHH
Confidence 999999999999998888999998532 12356899999999999954789999999999999999999999999999
Q ss_pred HHHHhh
Q 045570 462 QFISLN 467 (468)
Q Consensus 462 ~~~~~~ 467 (468)
+||+++
T Consensus 464 ~~v~~i 469 (477)
T PLN02863 464 GFVKHV 469 (477)
T ss_pred HHHHHH
Confidence 999986
No 14
>PLN02534 UDP-glycosyltransferase
Probab=100.00 E-value=3.4e-69 Score=533.40 Aligned_cols=450 Identities=24% Similarity=0.452 Sum_probs=326.3
Q ss_pred CcEEEEEcCCCCCChHHHHHHHHHHHhCCCCeEEEEEecCCCCChhhhhhhcccCCCCCCeEEEeCC-----CCCCCCCC
Q 045570 3 KAELIFVPSPGIGHLVSTLEFAKHLTDRDDRISVTILSMKLAVAPWVDAYTKSLTDSQPRICVIDLP-----PVDPPLPD 77 (468)
Q Consensus 3 k~~i~~~~~p~~GH~~P~l~La~~L~~rGH~~~Vt~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-----~~~~~~~~ 77 (468)
++||+++|+|++||++||++||+.|+++|+. |||++++.+... ...........+..|+|+.++ ++.|++.+
T Consensus 8 ~~Hvv~vPfpaqGHi~P~l~LAk~La~~G~~--vT~v~t~~n~~~-~~~~~~~~~~~~~~i~~~~lp~p~~~dglp~~~~ 84 (491)
T PLN02534 8 QLHFVLIPLMAQGHMIPMIDMARLLAERGVI--VSLVTTPQNASR-FAKTIDRARESGLPIRLVQIPFPCKEVGLPIGCE 84 (491)
T ss_pred CCEEEEECCCCcchHHHHHHHHHHHHhCCCe--EEEEECCCcHHH-HhhhhhhccccCCCeEEEEcCCCCccCCCCCCcc
Confidence 4799999999999999999999999999955 999999865432 122221111111248999988 34454433
Q ss_pred CcCCChH-HHHHHHHHhhchhHHHHHHhhhccCCCCccEEEEcCCcchHHHHHHHcCCCeEEEeCchhHHHHHHhhhhcc
Q 045570 78 VLKKSPE-YFISLVVESHLPNVKNIVSSRSNSGSLQVTGLVLDFFCVSMVDIAKELSLPSYMFLTSNMGFLRLMLYLPTR 156 (468)
Q Consensus 78 ~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~D~vv~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~ 156 (468)
....... .++..+... ...+.+.+++++++...+++|||+|.+++|+..+|+++|||++.|++++++.++.++.....
T Consensus 85 ~~~~~~~~~~~~~~~~~-~~~l~~~l~~lL~~~~~pp~cIV~D~f~~Wa~dVA~~lgIP~v~F~t~~a~~~~~~~~~~~~ 163 (491)
T PLN02534 85 NLDTLPSRDLLRKFYDA-VDKLQQPLERFLEQAKPPPSCIISDKCLSWTSKTAQRFNIPRIVFHGMCCFSLLSSHNIRLH 163 (491)
T ss_pred ccccCCcHHHHHHHHHH-HHHhHHHHHHHHHhcCCCCcEEEECCccHHHHHHHHHhCCCeEEEecchHHHHHHHHHHHHh
Confidence 2211111 222222222 22344444444432234689999999999999999999999999999999887765433211
Q ss_pred cccccccccCCCCccccCCCCC--CCCCCcCCCccccCCcchHHHHHHHhh-ccCCcEEEEcCccccCHHHHHHhhcCCC
Q 045570 157 QDRISTVFESSDDELLIPGITS--PVPVCVMPSCLFNKDGGHATLVKLAQR-FKDVDGIIVNTFHELEPYAVNAFSGDLN 233 (468)
Q Consensus 157 ~~~~~~~~~~~~~~~~~p~~~~--~~~~~~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~s~~~l~~~~~~~~~~~~~ 233 (468)
.... .......++.+|+++. .++..+++..+.... .+..+...+.. .+.++++++|||++||+.++..+.....
T Consensus 164 ~~~~--~~~~~~~~~~iPg~p~~~~l~~~dlp~~~~~~~-~~~~~~~~~~~~~~~a~~vlvNTf~eLE~~~l~~l~~~~~ 240 (491)
T PLN02534 164 NAHL--SVSSDSEPFVVPGMPQSIEITRAQLPGAFVSLP-DLDDVRNKMREAESTAFGVVVNSFNELEHGCAEAYEKAIK 240 (491)
T ss_pred cccc--cCCCCCceeecCCCCccccccHHHCChhhcCcc-cHHHHHHHHHhhcccCCEEEEecHHHhhHHHHHHHHhhcC
Confidence 1110 1111223456788763 256667776443222 33444444433 3457799999999999999999876444
Q ss_pred CCeEEeccccCCCCCC--C-CCCC--hhcHhHHHHhhhcCCCCcEEEEeccCccccCHHHHHHHHHHHHhCCCcEEEEEe
Q 045570 234 PPLYTAGPVLHLKSQP--N-PDLD--EAQYQKIFQWLDDLAESSVVFLCFGSSGSFDVAQVKEIAIGLERSGYNFLWSLR 308 (468)
Q Consensus 234 p~v~~vGpl~~~~~~~--~-~~~~--~~~~~~~~~~l~~~~~~~vv~vs~GS~~~~~~~~~~~~~~al~~~~~~~iw~~~ 308 (468)
++++.|||++...... . .... ....++|.+|||++++++||||||||+....++++.+++.+|+.++++|||+++
T Consensus 241 ~~v~~VGPL~~~~~~~~~~~~~~~~~~~~~~~cl~wLd~~~~~sVvyvsfGS~~~~~~~q~~e~a~gl~~~~~~flW~~r 320 (491)
T PLN02534 241 KKVWCVGPVSLCNKRNLDKFERGNKASIDETQCLEWLDSMKPRSVIYACLGSLCRLVPSQLIELGLGLEASKKPFIWVIK 320 (491)
T ss_pred CcEEEECcccccccccccccccCCccccchHHHHHHHhcCCCCceEEEEecccccCCHHHHHHHHHHHHhCCCCEEEEEe
Confidence 6799999997532110 0 0000 112457999999998899999999999999999999999999999999999998
Q ss_pred cCCCCCccccccccCCC-CCCchhHHHHhcCCeEE-EEeccHHHhhhccccceeeeccCchhHHHHHhcCCcEEeccCcc
Q 045570 309 VSSPKDEVSAHRYVTNN-GVFPEGFLERIKGRGMI-WGWVPQVEILAHKAIGGFVSHCGWNSILESLWYGVPIATWPIYA 386 (468)
Q Consensus 309 ~~~~~~~~~~~~~~~~~-~~lp~~~~~~~~~~~~v-~~~vpq~~iL~~~~~~~~i~HgG~~s~~eal~~GvP~v~~P~~~ 386 (468)
...... +.. ..+|++|.++..+++.+ .+|+||.+||+|+++++|||||||||++||+++|||||++|+++
T Consensus 321 ~~~~~~--------~~~~~~~p~gf~~~~~~~g~~v~~w~pq~~iL~h~~v~~fvtH~G~ns~~ea~~~GvP~v~~P~~~ 392 (491)
T PLN02534 321 TGEKHS--------ELEEWLVKENFEERIKGRGLLIKGWAPQVLILSHPAIGGFLTHCGWNSTIEGICSGVPMITWPLFA 392 (491)
T ss_pred cCcccc--------chhhhcCchhhHHhhccCCeeccCCCCHHHHhcCCccceEEecCccHHHHHHHHcCCCEEeccccc
Confidence 431100 011 24689999886655554 59999999999999999999999999999999999999999999
Q ss_pred ccchhHHHHHhhhceEEEeeec----cccCC--c-ccChhHHHHHHHHHhc--C--cHHHHHHHHHHHHHHHHhhhcCCC
Q 045570 387 EQQLNAFRMVKELGLALDLRLD----YRVGS--D-LVMAGDIESAVRCLMD--G--ENKIRKKVKEMAEISRKSLMEGGS 455 (468)
Q Consensus 387 DQ~~na~~~~~~~G~G~~~~~~----~~~~~--~-~~~~~~l~~av~~vl~--~--~~~~~~~a~~l~~~~~~~~~~gg~ 455 (468)
||+.||+++++.||+|+++..+ +..+. + .+++++|+++|+++|. + .+++|+||++|++++++++.+|||
T Consensus 393 dq~~na~~~~e~~~vGv~~~~~~~~~~~~~~~~~~~v~~eev~~~v~~~m~~~~eeg~~~R~rA~elk~~a~~Av~~GGS 472 (491)
T PLN02534 393 EQFLNEKLIVEVLRIGVRVGVEVPVRWGDEERVGVLVKKDEVEKAVKTLMDDGGEEGERRRRRAQELGVMARKAMELGGS 472 (491)
T ss_pred cHHHHHHHHHHhhcceEEecccccccccccccccCccCHHHHHHHHHHHhccccccHHHHHHHHHHHHHHHHHHhcCCCc
Confidence 9999999999999999987421 10001 1 4899999999999995 2 258999999999999999999999
Q ss_pred hHHHHHHHHHhh
Q 045570 456 SFNSIGQFISLN 467 (468)
Q Consensus 456 ~~~~~~~~~~~~ 467 (468)
|..++++||++|
T Consensus 473 S~~nl~~fv~~i 484 (491)
T PLN02534 473 SHINLSILIQDV 484 (491)
T ss_pred HHHHHHHHHHHH
Confidence 999999999986
No 15
>PLN02210 UDP-glucosyl transferase
Probab=100.00 E-value=3.6e-69 Score=533.09 Aligned_cols=431 Identities=24% Similarity=0.422 Sum_probs=326.6
Q ss_pred CcEEEEEcCCCCCChHHHHHHHHH--HHhCCCCeEEEEEecCCCCChhhhhhhcccCCCCCCeEEEeCCCCCCCCCCCcC
Q 045570 3 KAELIFVPSPGIGHLVSTLEFAKH--LTDRDDRISVTILSMKLAVAPWVDAYTKSLTDSQPRICVIDLPPVDPPLPDVLK 80 (468)
Q Consensus 3 k~~i~~~~~p~~GH~~P~l~La~~--L~~rGH~~~Vt~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 80 (468)
++||+++|+|++||++|+++||+. |++||+. ||+++++.++.. ++........+++..++++.|++.+
T Consensus 8 ~~hvv~~P~pa~GHi~P~l~La~~L~L~~~G~~--VT~v~t~~~~~~-----~~~~~~~~~~~~~~~~~~glp~~~~--- 77 (456)
T PLN02210 8 ETHVLMVTLAFQGHINPMLKLAKHLSLSSKNLH--FTLATTEQARDL-----LSTVEKPRRPVDLVFFSDGLPKDDP--- 77 (456)
T ss_pred CCEEEEeCCcccccHHHHHHHHHHHHhhcCCcE--EEEEeccchhhh-----hccccCCCCceEEEECCCCCCCCcc---
Confidence 579999999999999999999999 5699966 999999854321 2221111235778777766555432
Q ss_pred CChHHHHHHHHHhhchhHHHHHHhhhccCCCCccEEEEcCCcchHHHHHHHcCCCeEEEeCchhHHHHHHhhhhcccccc
Q 045570 81 KSPEYFISLVVESHLPNVKNIVSSRSNSGSLQVTGLVLDFFCVSMVDIAKELSLPSYMFLTSNMGFLRLMLYLPTRQDRI 160 (468)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~D~vv~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~ 160 (468)
.+...++..+.+.+.+.+++.+++ .++||||+|.+++|+..+|+++|||.+.|+++++..+..+++.......
T Consensus 78 ~~~~~~~~~~~~~~~~~l~~~l~~------~~~~~vI~D~~~~w~~~vA~~lgIP~~~f~~~sa~~~~~~~~~~~~~~~- 150 (456)
T PLN02210 78 RAPETLLKSLNKVGAKNLSKIIEE------KRYSCIISSPFTPWVPAVAAAHNIPCAILWIQACGAYSVYYRYYMKTNS- 150 (456)
T ss_pred cCHHHHHHHHHHhhhHHHHHHHhc------CCCcEEEECCcchhHHHHHHHhCCCEEEEecccHHHHHHHHhhhhccCC-
Confidence 233344444444444455555543 2699999999999999999999999999999999888877654321111
Q ss_pred cccccCCCCccccCCCCCCCCCCcCCCccccCCc-chHHHH-HHHhhccCCcEEEEcCccccCHHHHHHhhcCCCCCeEE
Q 045570 161 STVFESSDDELLIPGITSPVPVCVMPSCLFNKDG-GHATLV-KLAQRFKDVDGIIVNTFHELEPYAVNAFSGDLNPPLYT 238 (468)
Q Consensus 161 ~~~~~~~~~~~~~p~~~~~~~~~~l~~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~s~~~l~~~~~~~~~~~~~p~v~~ 238 (468)
.....+......+|+++ +++..+++..+..... .+..+. +..+.....+++++|||+++|+.++..+.. .+++++
T Consensus 151 ~~~~~~~~~~~~~Pgl~-~~~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~vlvNTf~eLE~~~~~~l~~--~~~v~~ 227 (456)
T PLN02210 151 FPDLEDLNQTVELPALP-LLEVRDLPSFMLPSGGAHFNNLMAEFADCLRYVKWVLVNSFYELESEIIESMAD--LKPVIP 227 (456)
T ss_pred CCcccccCCeeeCCCCC-CCChhhCChhhhcCCchHHHHHHHHHHHhcccCCEEEEeCHHHHhHHHHHHHhh--cCCEEE
Confidence 11111111224578875 5777788876544331 122232 333455667899999999999999988876 367999
Q ss_pred eccccCCC---CCCC---CC--CC-hhcHhHHHHhhhcCCCCcEEEEeccCccccCHHHHHHHHHHHHhCCCcEEEEEec
Q 045570 239 AGPVLHLK---SQPN---PD--LD-EAQYQKIFQWLDDLAESSVVFLCFGSSGSFDVAQVKEIAIGLERSGYNFLWSLRV 309 (468)
Q Consensus 239 vGpl~~~~---~~~~---~~--~~-~~~~~~~~~~l~~~~~~~vv~vs~GS~~~~~~~~~~~~~~al~~~~~~~iw~~~~ 309 (468)
|||++... .... .. .. +..+++|.+|||++++++||||||||+...+.+++++++.+|+..+++|||+++.
T Consensus 228 VGPl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wld~~~~~svvyvsfGS~~~~~~~~~~e~a~~l~~~~~~flw~~~~ 307 (456)
T PLN02210 228 IGPLVSPFLLGDDEEETLDGKNLDMCKSDDCCMEWLDKQARSSVVYISFGSMLESLENQVETIAKALKNRGVPFLWVIRP 307 (456)
T ss_pred EcccCchhhcCcccccccccccccccccchHHHHHHhCCCCCceEEEEecccccCCHHHHHHHHHHHHhCCCCEEEEEeC
Confidence 99997421 1000 00 00 1245679999999988899999999999999999999999999999999999985
Q ss_pred CCCCCccccccccCCCCCCchhHHHHh-cCCeEEEEeccHHHhhhccccceeeeccCchhHHHHHhcCCcEEeccCcccc
Q 045570 310 SSPKDEVSAHRYVTNNGVFPEGFLERI-KGRGMIWGWVPQVEILAHKAIGGFVSHCGWNSILESLWYGVPIATWPIYAEQ 388 (468)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~lp~~~~~~~-~~~~~v~~~vpq~~iL~~~~~~~~i~HgG~~s~~eal~~GvP~v~~P~~~DQ 388 (468)
... ...+..+.++. ++++++++|+||.+||+|+++++|||||||||++|++++|||||++|+++||
T Consensus 308 ~~~-------------~~~~~~~~~~~~~~~g~v~~w~PQ~~iL~h~~vg~FitH~G~nS~~Eai~~GVP~v~~P~~~DQ 374 (456)
T PLN02210 308 KEK-------------AQNVQVLQEMVKEGQGVVLEWSPQEKILSHMAISCFVTHCGWNSTIETVVAGVPVVAYPSWTDQ 374 (456)
T ss_pred Ccc-------------ccchhhHHhhccCCCeEEEecCCHHHHhcCcCcCeEEeeCCcccHHHHHHcCCCEEeccccccc
Confidence 310 11334566666 4888899999999999999999999999999999999999999999999999
Q ss_pred chhHHHHHhhhceEEEeeeccccCCcccChhHHHHHHHHHhcCc--HHHHHHHHHHHHHHHHhhhcCCChHHHHHHHHHh
Q 045570 389 QLNAFRMVKELGLALDLRLDYRVGSDLVMAGDIESAVRCLMDGE--NKIRKKVKEMAEISRKSLMEGGSSFNSIGQFISL 466 (468)
Q Consensus 389 ~~na~~~~~~~G~G~~~~~~~~~~~~~~~~~~l~~av~~vl~~~--~~~~~~a~~l~~~~~~~~~~gg~~~~~~~~~~~~ 466 (468)
+.||+++++.||+|+.+..++ ..+.+++++|+++|+++|.++ +++|+||+++++.+++++++||||++++++||++
T Consensus 375 ~~na~~~~~~~g~G~~l~~~~--~~~~~~~~~l~~av~~~m~~~~g~~~r~~a~~l~~~a~~Av~~gGSS~~~l~~~v~~ 452 (456)
T PLN02210 375 PIDARLLVDVFGIGVRMRNDA--VDGELKVEEVERCIEAVTEGPAAADIRRRAAELKHVARLALAPGGSSARNLDLFISD 452 (456)
T ss_pred HHHHHHHHHHhCeEEEEeccc--cCCcCCHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHH
Confidence 999999998679999986421 124789999999999999732 2699999999999999999999999999999998
Q ss_pred hC
Q 045570 467 NF 468 (468)
Q Consensus 467 ~~ 468 (468)
+.
T Consensus 453 ~~ 454 (456)
T PLN02210 453 IT 454 (456)
T ss_pred Hh
Confidence 73
No 16
>PLN02208 glycosyltransferase family protein
Probab=100.00 E-value=1.6e-68 Score=525.04 Aligned_cols=419 Identities=23% Similarity=0.322 Sum_probs=311.7
Q ss_pred CC-CcEEEEEcCCCCCChHHHHHHHHHHHhCCCCeEEEEEecCCCCChhhhhhhcccCCCCCCeEEEeCCC----CCCCC
Q 045570 1 MK-KAELIFVPSPGIGHLVSTLEFAKHLTDRDDRISVTILSMKLAVAPWVDAYTKSLTDSQPRICVIDLPP----VDPPL 75 (468)
Q Consensus 1 m~-k~~i~~~~~p~~GH~~P~l~La~~L~~rGH~~~Vt~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~----~~~~~ 75 (468)
|+ |+||+++|+|++||++|+++||+.|+++||+ |||++++.+... ++........+++..++. +.+++
T Consensus 1 ~~~~~hvv~~P~paqGHi~P~l~LAk~La~~G~~--VT~vtt~~~~~~-----i~~~~a~~~~i~~~~l~~p~~dgLp~g 73 (442)
T PLN02208 1 MEPKFHAFMFPWFAFGHMIPFLHLANKLAEKGHR--VTFLLPKKAQKQ-----LEHHNLFPDSIVFHPLTIPPVNGLPAG 73 (442)
T ss_pred CCCCCEEEEecCccccHHHHHHHHHHHHHhCCCE--EEEEeccchhhh-----hhcccCCCCceEEEEeCCCCccCCCCC
Confidence 55 6799999999999999999999999999977 999998743221 222212223466666543 23444
Q ss_pred CCCcCCChH----HHHHHHHHhhchhHHHHHHhhhccCCCCccEEEEcCCcchHHHHHHHcCCCeEEEeCchhHHHHHHh
Q 045570 76 PDVLKKSPE----YFISLVVESHLPNVKNIVSSRSNSGSLQVTGLVLDFFCVSMVDIAKELSLPSYMFLTSNMGFLRLML 151 (468)
Q Consensus 76 ~~~~~~~~~----~~~~~~~~~~~~~~~~~l~~~~~~~~~~~D~vv~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~ 151 (468)
.+. ..+.. ..+....+.+.+.+++++++. ++||||+| ++.|+..+|+++|||++.|+++++..++ ++
T Consensus 74 ~~~-~~~l~~~l~~~~~~~~~~~~~~l~~~L~~~------~~~cVV~D-~~~wa~~vA~e~giP~~~f~~~~a~~~~-~~ 144 (442)
T PLN02208 74 AET-TSDIPISMDNLLSEALDLTRDQVEAAVRAL------RPDLIFFD-FAQWIPEMAKEHMIKSVSYIIVSATTIA-HT 144 (442)
T ss_pred ccc-ccchhHHHHHHHHHHHHHHHHHHHHHHhhC------CCeEEEEC-CcHhHHHHHHHhCCCEEEEEhhhHHHHH-HH
Confidence 322 11121 222222334444444444432 78999999 5789999999999999999999988664 44
Q ss_pred hhhcccccccccccCCCCccccCCCCC---CCCCCcCCCccccCCcchHHHHHHH-hhccCCcEEEEcCccccCHHHHHH
Q 045570 152 YLPTRQDRISTVFESSDDELLIPGITS---PVPVCVMPSCLFNKDGGHATLVKLA-QRFKDVDGIIVNTFHELEPYAVNA 227 (468)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~p~~~~---~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~s~~~l~~~~~~~ 227 (468)
+.+. . .....+|+++. .++..+++... .....+..+.+.. ....+++++++|||+|||+.++.+
T Consensus 145 ~~~~----~-------~~~~~~pglp~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~vl~Ntf~eLE~~~~~~ 212 (442)
T PLN02208 145 HVPG----G-------KLGVPPPGYPSSKVLFRENDAHALA-TLSIFYKRLYHQITTGLKSCDVIALRTCKEIEGKFCDY 212 (442)
T ss_pred ccCc----c-------ccCCCCCCCCCcccccCHHHcCccc-ccchHHHHHHHHHHhhhccCCEEEEECHHHHHHHHHHH
Confidence 4321 0 00112466653 13455555421 1111234444333 355678999999999999999999
Q ss_pred hhcCCCCCeEEeccccCCCCCCCCCCChhcHhHHHHhhhcCCCCcEEEEeccCccccCHHHHHHHHHHHHhCCCcEEEEE
Q 045570 228 FSGDLNPPLYTAGPVLHLKSQPNPDLDEAQYQKIFQWLDDLAESSVVFLCFGSSGSFDVAQVKEIAIGLERSGYNFLWSL 307 (468)
Q Consensus 228 ~~~~~~p~v~~vGpl~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vv~vs~GS~~~~~~~~~~~~~~al~~~~~~~iw~~ 307 (468)
+.+...|++++|||++...... .+++++|.+|||.+++++||||||||+..++.+++.+++.+++..+.+++|++
T Consensus 213 ~~~~~~~~v~~vGpl~~~~~~~-----~~~~~~~~~wLd~~~~~sVvyvSfGS~~~l~~~q~~e~~~~l~~s~~pf~wv~ 287 (442)
T PLN02208 213 ISRQYHKKVLLTGPMFPEPDTS-----KPLEEQWSHFLSGFPPKSVVFCSLGSQIILEKDQFQELCLGMELTGLPFLIAV 287 (442)
T ss_pred HHhhcCCCEEEEeecccCcCCC-----CCCHHHHHHHHhcCCCCcEEEEeccccccCCHHHHHHHHHHHHhCCCcEEEEE
Confidence 9876668899999998643211 23567899999999888999999999999999999999999999999999999
Q ss_pred ecCCCCCccccccccCCCCCCchhHHHHhcCCeEEE-EeccHHHhhhccccceeeeccCchhHHHHHhcCCcEEeccCcc
Q 045570 308 RVSSPKDEVSAHRYVTNNGVFPEGFLERIKGRGMIW-GWVPQVEILAHKAIGGFVSHCGWNSILESLWYGVPIATWPIYA 386 (468)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~v~-~~vpq~~iL~~~~~~~~i~HgG~~s~~eal~~GvP~v~~P~~~ 386 (468)
+..... .+....+|++|++++.+++.++ +|+||.+||+|+++++|||||||||++||+++|||||++|+++
T Consensus 288 r~~~~~--------~~~~~~lp~~f~~r~~~~g~~v~~W~PQ~~iL~H~~v~~FvtHcG~nS~~Eai~~GVP~l~~P~~~ 359 (442)
T PLN02208 288 KPPRGS--------STVQEGLPEGFEERVKGRGVVWGGWVQQPLILDHPSIGCFVNHCGPGTIWESLVSDCQMVLIPFLS 359 (442)
T ss_pred eCCCcc--------cchhhhCCHHHHHHHhcCCcEeeccCCHHHHhcCCccCeEEccCCchHHHHHHHcCCCEEecCcch
Confidence 853100 0112358999999988766666 9999999999999999999999999999999999999999999
Q ss_pred ccchhHHHHHhhhceEEEeeeccccCCcccChhHHHHHHHHHhcCc----HHHHHHHHHHHHHHHHhhhcCCChHHHHHH
Q 045570 387 EQQLNAFRMVKELGLALDLRLDYRVGSDLVMAGDIESAVRCLMDGE----NKIRKKVKEMAEISRKSLMEGGSSFNSIGQ 462 (468)
Q Consensus 387 DQ~~na~~~~~~~G~G~~~~~~~~~~~~~~~~~~l~~av~~vl~~~----~~~~~~a~~l~~~~~~~~~~gg~~~~~~~~ 462 (468)
||+.||+++++.||+|+.++++ +.+.+++++|+++|+++|+++ +++|+||+++++.+. +||||.+++++
T Consensus 360 DQ~~na~~~~~~~g~gv~~~~~---~~~~~~~~~l~~ai~~~m~~~~e~g~~~r~~~~~~~~~~~----~~gsS~~~l~~ 432 (442)
T PLN02208 360 DQVLFTRLMTEEFEVSVEVSRE---KTGWFSKESLSNAIKSVMDKDSDLGKLVRSNHTKLKEILV----SPGLLTGYVDK 432 (442)
T ss_pred hhHHHHHHHHHHhceeEEeccc---cCCcCcHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHh----cCCcHHHHHHH
Confidence 9999999988877999999742 013599999999999999732 259999999998874 37899999999
Q ss_pred HHHhh
Q 045570 463 FISLN 467 (468)
Q Consensus 463 ~~~~~ 467 (468)
||+++
T Consensus 433 ~v~~l 437 (442)
T PLN02208 433 FVEEL 437 (442)
T ss_pred HHHHH
Confidence 99976
No 17
>PLN02448 UDP-glycosyltransferase family protein
Probab=100.00 E-value=6.6e-68 Score=527.76 Aligned_cols=433 Identities=26% Similarity=0.430 Sum_probs=332.2
Q ss_pred CCcEEEEEcCCCCCChHHHHHHHHHHHhC--CCCeEEEEEecCCCCChhhhhhhcccCCCCCCeEEEeCCCCCCCCCCCc
Q 045570 2 KKAELIFVPSPGIGHLVSTLEFAKHLTDR--DDRISVTILSMKLAVAPWVDAYTKSLTDSQPRICVIDLPPVDPPLPDVL 79 (468)
Q Consensus 2 ~k~~i~~~~~p~~GH~~P~l~La~~L~~r--GH~~~Vt~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 79 (468)
.++||+++|+|++||++||++||++|++| ||. ||+++++.++. .++.... ..+++|+.++++.+++.+.
T Consensus 9 ~~~hVvlvp~pa~GHi~P~l~LA~~L~~~~~G~~--VT~~~t~~~~~-----~i~~~~~-~~gi~fv~lp~~~p~~~~~- 79 (459)
T PLN02448 9 TSCHVVAMPYPGRGHINPMMNLCKLLASRKPDIL--ITFVVTEEWLG-----LIGSDPK-PDNIRFATIPNVIPSELVR- 79 (459)
T ss_pred CCcEEEEECCcccccHHHHHHHHHHHHcCCCCcE--EEEEeCCchHh-----HhhccCC-CCCEEEEECCCCCCCcccc-
Confidence 36899999999999999999999999999 977 99999984332 2222111 2469999999765544321
Q ss_pred CCChHHHHHHHHHhhchhHHHHHHhhhccCCCCccEEEEcCCcchHHHHHHHcCCCeEEEeCchhHHHHHHhhhhccccc
Q 045570 80 KKSPEYFISLVVESHLPNVKNIVSSRSNSGSLQVTGLVLDFFCVSMVDIAKELSLPSYMFLTSNMGFLRLMLYLPTRQDR 159 (468)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~D~vv~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~ 159 (468)
..+...++..+.+.+.+.++++++++. .++||||+|.++.|+..+|+++|||++.|+++++..++.+.+.+.+...
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~l~~~~----~~~~~VI~D~~~~wa~~vA~~lgIP~v~f~~~~a~~~~~~~~~~~~~~~ 155 (459)
T PLN02448 80 AADFPGFLEAVMTKMEAPFEQLLDRLE----PPVTAIVADTYLFWAVGVGNRRNIPVASLWTMSATFFSVFYHFDLLPQN 155 (459)
T ss_pred ccCHHHHHHHHHHHhHHHHHHHHHhcC----CCcEEEEECCccHHHHHHHHHhCCCeEEEEhHHHHHHHHHHHhhhhhhc
Confidence 124444444444455556666666542 3789999999999999999999999999999999888877766433221
Q ss_pred ccccccCC---CC-ccccCCCCCCCCCCcCCCccccCCc-chHHHHHHHhhccCCcEEEEcCccccCHHHHHHhhcCCCC
Q 045570 160 ISTVFESS---DD-ELLIPGITSPVPVCVMPSCLFNKDG-GHATLVKLAQRFKDVDGIIVNTFHELEPYAVNAFSGDLNP 234 (468)
Q Consensus 160 ~~~~~~~~---~~-~~~~p~~~~~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~~~~~~~~~p 234 (468)
+..+.... .. ...+|+++ +++..+++..+..... .++.+.+......+.+++++|||++||+.++..+.....+
T Consensus 156 ~~~~~~~~~~~~~~~~~iPg~~-~l~~~dlp~~~~~~~~~~~~~~~~~~~~~~~~~~vlvNTf~eLE~~~~~~l~~~~~~ 234 (459)
T PLN02448 156 GHFPVELSESGEERVDYIPGLS-STRLSDLPPIFHGNSRRVLKRILEAFSWVPKAQYLLFTSFYELEAQAIDALKSKFPF 234 (459)
T ss_pred cCCCCccccccCCccccCCCCC-CCChHHCchhhcCCchHHHHHHHHHHhhcccCCEEEEccHHHhhHHHHHHHHhhcCC
Confidence 11111110 11 11477775 5677777765543321 2456666666667788999999999999999988764445
Q ss_pred CeEEeccccCCCCCC--CCCCC-hhcHhHHHHhhhcCCCCcEEEEeccCccccCHHHHHHHHHHHHhCCCcEEEEEecCC
Q 045570 235 PLYTAGPVLHLKSQP--NPDLD-EAQYQKIFQWLDDLAESSVVFLCFGSSGSFDVAQVKEIAIGLERSGYNFLWSLRVSS 311 (468)
Q Consensus 235 ~v~~vGpl~~~~~~~--~~~~~-~~~~~~~~~~l~~~~~~~vv~vs~GS~~~~~~~~~~~~~~al~~~~~~~iw~~~~~~ 311 (468)
+++.|||+.+..... ..+.. ...+.++.+||+.++++++|||||||+...+.+++++++++|+..+++|||+++..
T Consensus 235 ~~~~iGP~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~vvyvsfGs~~~~~~~~~~~~~~~l~~~~~~~lw~~~~~- 313 (459)
T PLN02448 235 PVYPIGPSIPYMELKDNSSSSNNEDNEPDYFQWLDSQPEGSVLYVSLGSFLSVSSAQMDEIAAGLRDSGVRFLWVARGE- 313 (459)
T ss_pred ceEEecCcccccccCCCccccccccchhHHHHHHcCCCCCceEEEeecccccCCHHHHHHHHHHHHhCCCCEEEEEcCc-
Confidence 799999997532110 00000 11235899999999888999999999988889999999999999999999987642
Q ss_pred CCCccccccccCCCCCCchhHHHHhcCCeEEEEeccHHHhhhccccceeeeccCchhHHHHHhcCCcEEeccCccccchh
Q 045570 312 PKDEVSAHRYVTNNGVFPEGFLERIKGRGMIWGWVPQVEILAHKAIGGFVSHCGWNSILESLWYGVPIATWPIYAEQQLN 391 (468)
Q Consensus 312 ~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~v~~~vpq~~iL~~~~~~~~i~HgG~~s~~eal~~GvP~v~~P~~~DQ~~n 391 (468)
..++.++.++|+++++|+||.+||+|+++++|||||||||++||+++|||||++|+++||+.|
T Consensus 314 -----------------~~~~~~~~~~~~~v~~w~pQ~~iL~h~~v~~fvtHgG~nS~~eal~~GvP~l~~P~~~DQ~~n 376 (459)
T PLN02448 314 -----------------ASRLKEICGDMGLVVPWCDQLKVLCHSSVGGFWTHCGWNSTLEAVFAGVPMLTFPLFWDQPLN 376 (459)
T ss_pred -----------------hhhHhHhccCCEEEeccCCHHHHhccCccceEEecCchhHHHHHHHcCCCEEeccccccchhh
Confidence 113445556789999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhhceEEEeeeccccCCcccChhHHHHHHHHHhcCc----HHHHHHHHHHHHHHHHhhhcCCChHHHHHHHHHhh
Q 045570 392 AFRMVKELGLALDLRLDYRVGSDLVMAGDIESAVRCLMDGE----NKIRKKVKEMAEISRKSLMEGGSSFNSIGQFISLN 467 (468)
Q Consensus 392 a~~~~~~~G~G~~~~~~~~~~~~~~~~~~l~~av~~vl~~~----~~~~~~a~~l~~~~~~~~~~gg~~~~~~~~~~~~~ 467 (468)
|+++++.||+|+.+..+.. ..+.+++++|+++|+++|+++ .+||+||+++++++++++.+||||+.++++||++|
T Consensus 377 a~~v~~~~g~G~~~~~~~~-~~~~~~~~~l~~av~~vl~~~~~~~~~~r~~a~~~~~~~~~a~~~gGss~~~l~~~v~~~ 455 (459)
T PLN02448 377 SKLIVEDWKIGWRVKREVG-EETLVGREEIAELVKRFMDLESEEGKEMRRRAKELQEICRGAIAKGGSSDTNLDAFIRDI 455 (459)
T ss_pred HHHHHHHhCceEEEecccc-cCCcCcHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHH
Confidence 9999998899998863210 123679999999999999731 38999999999999999999999999999999987
No 18
>PLN02670 transferase, transferring glycosyl groups
Probab=100.00 E-value=1.4e-67 Score=519.48 Aligned_cols=436 Identities=24% Similarity=0.419 Sum_probs=319.5
Q ss_pred CcEEEEEcCCCCCChHHHHHHHHHHHhCCCCeEEEEEecCCCCChhhhhhhcccCCCCCCeEEEeCCC----CCCCCCCC
Q 045570 3 KAELIFVPSPGIGHLVSTLEFAKHLTDRDDRISVTILSMKLAVAPWVDAYTKSLTDSQPRICVIDLPP----VDPPLPDV 78 (468)
Q Consensus 3 k~~i~~~~~p~~GH~~P~l~La~~L~~rGH~~~Vt~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~----~~~~~~~~ 78 (468)
++||+++|+|++||++||++||+.|+.||.. |||++++.++.... . . ......+|+++.++. +.|++.+.
T Consensus 6 ~~HVvl~P~paqGHi~P~l~LAk~La~~G~~--vT~v~t~~n~~~~~-~-~--~~~~~~~i~~~~lp~p~~dglp~~~~~ 79 (472)
T PLN02670 6 VLHVAMFPWLAMGHLIPFLRLSKLLAQKGHK--ISFISTPRNLHRLP-K-I--PSQLSSSITLVSFPLPSVPGLPSSAES 79 (472)
T ss_pred CcEEEEeCChhhhHHHHHHHHHHHHHhCCCE--EEEEeCCchHHhhh-h-c--cccCCCCeeEEECCCCccCCCCCCccc
Confidence 6799999999999999999999999999954 99999985543211 1 1 011123589999883 33444332
Q ss_pred cCCChH----HHHHHHHHhhchhHHHHHHhhhccCCCCccEEEEcCCcchHHHHHHHcCCCeEEEeCchhHHHHHHhhhh
Q 045570 79 LKKSPE----YFISLVVESHLPNVKNIVSSRSNSGSLQVTGLVLDFFCVSMVDIAKELSLPSYMFLTSNMGFLRLMLYLP 154 (468)
Q Consensus 79 ~~~~~~----~~~~~~~~~~~~~~~~~l~~~~~~~~~~~D~vv~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~ 154 (468)
. .+.. ..+....+.+.+.+++++++. +++|||+|.++.|+..+|+++|||++.|+++++..++.+++..
T Consensus 80 ~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~------~~~cvI~D~f~~wa~~vA~~~gIP~~~f~~~~a~~~~~~~~~~ 152 (472)
T PLN02670 80 S-TDVPYTKQQLLKKAFDLLEPPLTTFLETS------KPDWIIYDYASHWLPSIAAELGISKAFFSLFTAATLSFIGPPS 152 (472)
T ss_pred c-cccchhhHHHHHHHHHHhHHHHHHHHHhC------CCcEEEECCcchhHHHHHHHcCCCEEEEehhhHHHHHHHhhhH
Confidence 1 1221 123333334444555554432 6899999999999999999999999999999998888876543
Q ss_pred cccccccccccCCCCcc-ccCCCCC-----CCCCCcCCCccccC--C-cchHHHHHHHhhccCCcEEEEcCccccCHHHH
Q 045570 155 TRQDRISTVFESSDDEL-LIPGITS-----PVPVCVMPSCLFNK--D-GGHATLVKLAQRFKDVDGIIVNTFHELEPYAV 225 (468)
Q Consensus 155 ~~~~~~~~~~~~~~~~~-~~p~~~~-----~~~~~~l~~~~~~~--~-~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~ 225 (468)
.....+. ........ .+|++.+ .++..+++..+... . ..+..+.+......+++++++|||++||+.++
T Consensus 153 ~~~~~~~--~~~~~~~~~~~p~~~P~~~~~~~~~~dlp~~~~~~~~~~~~~~~~~~~~~~~~~~~gvlvNTf~eLE~~~l 230 (472)
T PLN02670 153 SLMEGGD--LRSTAEDFTVVPPWVPFESNIVFRYHEVTKYVEKTEEDETGPSDSVRFGFAIGGSDVVIIRSSPEFEPEWF 230 (472)
T ss_pred hhhhccc--CCCccccccCCCCcCCCCccccccHHHhhHHHhccCccchHHHHHHHHHhhcccCCEEEEeCHHHHhHHHH
Confidence 2222221 11111111 2343311 13445666554321 1 12344455555667788999999999999999
Q ss_pred HHhhcCCCCCeEEeccccCCC-CCCCCC-CChhcHhHHHHhhhcCCCCcEEEEeccCccccCHHHHHHHHHHHHhCCCcE
Q 045570 226 NAFSGDLNPPLYTAGPVLHLK-SQPNPD-LDEAQYQKIFQWLDDLAESSVVFLCFGSSGSFDVAQVKEIAIGLERSGYNF 303 (468)
Q Consensus 226 ~~~~~~~~p~v~~vGpl~~~~-~~~~~~-~~~~~~~~~~~~l~~~~~~~vv~vs~GS~~~~~~~~~~~~~~al~~~~~~~ 303 (468)
..++....++++.|||+.... ...... .+...+++|.+|||++++++||||||||+..++.+++++++.+|+.++++|
T Consensus 231 ~~l~~~~~~~v~~VGPl~~~~~~~~~~~~~~~~~~~~~~~wLd~~~~~sVvyvsfGS~~~l~~~q~~ela~gl~~s~~~F 310 (472)
T PLN02670 231 DLLSDLYRKPIIPIGFLPPVIEDDEEDDTIDVKGWVRIKEWLDKQRVNSVVYVALGTEASLRREEVTELALGLEKSETPF 310 (472)
T ss_pred HHHHHhhCCCeEEEecCCccccccccccccccchhHHHHHHHhcCCCCceEEEEecccccCCHHHHHHHHHHHHHCCCCE
Confidence 998763346799999997531 110000 000123679999999988899999999999999999999999999999999
Q ss_pred EEEEecCCCCCccccccccCCCCCCchhHHHHhcCCeEEE-EeccHHHhhhccccceeeeccCchhHHHHHhcCCcEEec
Q 045570 304 LWSLRVSSPKDEVSAHRYVTNNGVFPEGFLERIKGRGMIW-GWVPQVEILAHKAIGGFVSHCGWNSILESLWYGVPIATW 382 (468)
Q Consensus 304 iw~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~v~-~~vpq~~iL~~~~~~~~i~HgG~~s~~eal~~GvP~v~~ 382 (468)
||+++...... .+....+|++|+++.++++.++ +|+||.+||+|+++++|||||||||++||+++|||||++
T Consensus 311 lWv~r~~~~~~-------~~~~~~lp~~f~~~~~~rG~vv~~W~PQ~~IL~H~~v~~FvtHcGwnS~~Eai~~GVP~l~~ 383 (472)
T PLN02670 311 FWVLRNEPGTT-------QNALEMLPDGFEERVKGRGMIHVGWVPQVKILSHESVGGFLTHCGWNSVVEGLGFGRVLILF 383 (472)
T ss_pred EEEEcCCcccc-------cchhhcCChHHHHhccCCCeEEeCcCCHHHHhcCcccceeeecCCcchHHHHHHcCCCEEeC
Confidence 99998531100 1112358999999999988886 999999999999999999999999999999999999999
Q ss_pred cCccccchhHHHHHhhhceEEEeeeccccCCcccChhHHHHHHHHHhcCc--HHHHHHHHHHHHHHHHhhhcCCChHHHH
Q 045570 383 PIYAEQQLNAFRMVKELGLALDLRLDYRVGSDLVMAGDIESAVRCLMDGE--NKIRKKVKEMAEISRKSLMEGGSSFNSI 460 (468)
Q Consensus 383 P~~~DQ~~na~~~~~~~G~G~~~~~~~~~~~~~~~~~~l~~av~~vl~~~--~~~~~~a~~l~~~~~~~~~~gg~~~~~~ 460 (468)
|+++||+.||+++++ +|+|+.++... +.+.+++++|+++|+++|.++ ++||+||+++++++++. +.-...+
T Consensus 384 P~~~DQ~~Na~~v~~-~g~Gv~l~~~~--~~~~~~~e~i~~av~~vm~~~~g~~~r~~a~~l~~~~~~~----~~~~~~~ 456 (472)
T PLN02670 384 PVLNEQGLNTRLLHG-KKLGLEVPRDE--RDGSFTSDSVAESVRLAMVDDAGEEIRDKAKEMRNLFGDM----DRNNRYV 456 (472)
T ss_pred cchhccHHHHHHHHH-cCeeEEeeccc--cCCcCcHHHHHHHHHHHhcCcchHHHHHHHHHHHHHHhCc----chhHHHH
Confidence 999999999999976 59999997421 123589999999999999732 28999999999999975 4556889
Q ss_pred HHHHHhh
Q 045570 461 GQFISLN 467 (468)
Q Consensus 461 ~~~~~~~ 467 (468)
++|+++|
T Consensus 457 ~~~~~~l 463 (472)
T PLN02670 457 DELVHYL 463 (472)
T ss_pred HHHHHHH
Confidence 9998876
No 19
>PLN02764 glycosyltransferase family protein
Probab=100.00 E-value=3.9e-67 Score=512.14 Aligned_cols=421 Identities=23% Similarity=0.356 Sum_probs=311.8
Q ss_pred CcEEEEEcCCCCCChHHHHHHHHHHHhCCCCeEEEEEecCCCCChhhhhhhcccCCCCCCeEEEeCC--CCCCCCCCCcC
Q 045570 3 KAELIFVPSPGIGHLVSTLEFAKHLTDRDDRISVTILSMKLAVAPWVDAYTKSLTDSQPRICVIDLP--PVDPPLPDVLK 80 (468)
Q Consensus 3 k~~i~~~~~p~~GH~~P~l~La~~L~~rGH~~~Vt~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~--~~~~~~~~~~~ 80 (468)
|+||+++|+|++||++||++||+.|+.+|+. ||+++++.+... ... .. .......+.+.++| ++.|++.+...
T Consensus 5 ~~Hvvl~P~paqGHi~P~l~LAk~La~~g~~--vT~~tt~~~~~~-~~~-~~-~~~~~~~v~~~~~p~~~glp~g~e~~~ 79 (453)
T PLN02764 5 KFHVLMYPWFATGHMTPFLFLANKLAEKGHT--VTFLLPKKALKQ-LEH-LN-LFPHNIVFRSVTVPHVDGLPVGTETVS 79 (453)
T ss_pred CcEEEEECCcccccHHHHHHHHHHHHhCCCE--EEEEeCcchhhh-hcc-cc-cCCCCceEEEEECCCcCCCCCcccccc
Confidence 7899999999999999999999999999955 999999854322 111 10 00111136677777 33454433211
Q ss_pred CChH---HHHHHHHHhhchhHHHHHHhhhccCCCCccEEEEcCCcchHHHHHHHcCCCeEEEeCchhHHHHHHhhhhccc
Q 045570 81 KSPE---YFISLVVESHLPNVKNIVSSRSNSGSLQVTGLVLDFFCVSMVDIAKELSLPSYMFLTSNMGFLRLMLYLPTRQ 157 (468)
Q Consensus 81 ~~~~---~~~~~~~~~~~~~~~~~l~~~~~~~~~~~D~vv~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~ 157 (468)
..+. ..+........+.+++.+++. +++|||+|+ ++|+..+|+++|||++.|++++++.++.+...
T Consensus 80 ~~~~~~~~~~~~a~~~~~~~~~~~l~~~------~~~~iV~D~-~~w~~~vA~~~gIP~~~f~~~~a~~~~~~~~~---- 148 (453)
T PLN02764 80 EIPVTSADLLMSAMDLTRDQVEVVVRAV------EPDLIFFDF-AHWIPEVARDFGLKTVKYVVVSASTIASMLVP---- 148 (453)
T ss_pred cCChhHHHHHHHHHHHhHHHHHHHHHhC------CCCEEEECC-chhHHHHHHHhCCCEEEEEcHHHHHHHHHhcc----
Confidence 1111 122233333444555555442 679999996 88999999999999999999999888877531
Q ss_pred ccccccccCCCCccccCCCCC---CCCCCcCCCccc--cCC--cch-HHHHHHHhhccCCcEEEEcCccccCHHHHHHhh
Q 045570 158 DRISTVFESSDDELLIPGITS---PVPVCVMPSCLF--NKD--GGH-ATLVKLAQRFKDVDGIIVNTFHELEPYAVNAFS 229 (468)
Q Consensus 158 ~~~~~~~~~~~~~~~~p~~~~---~~~~~~l~~~~~--~~~--~~~-~~~~~~~~~~~~~~~~~~~s~~~l~~~~~~~~~ 229 (468)
.+. +. ..+|+++. .++..+++.... ... ... ..+.+........+++++|||+|||+.++.++.
T Consensus 149 -~~~--~~-----~~~pglp~~~v~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~vlvNTf~eLE~~~~~~~~ 220 (453)
T PLN02764 149 -GGE--LG-----VPPPGYPSSKVLLRKQDAYTMKNLEPTNTIDVGPNLLERVTTSLMNSDVIAIRTAREIEGNFCDYIE 220 (453)
T ss_pred -ccc--CC-----CCCCCCCCCcccCcHhhCcchhhcCCCccchhHHHHHHHHHHhhccCCEEEEeccHHhhHHHHHHHH
Confidence 000 00 12366642 244455554211 111 012 233333356677889999999999999999987
Q ss_pred cCCCCCeEEeccccCCCCCCCCCCChhcHhHHHHhhhcCCCCcEEEEeccCccccCHHHHHHHHHHHHhCCCcEEEEEec
Q 045570 230 GDLNPPLYTAGPVLHLKSQPNPDLDEAQYQKIFQWLDDLAESSVVFLCFGSSGSFDVAQVKEIAIGLERSGYNFLWSLRV 309 (468)
Q Consensus 230 ~~~~p~v~~vGpl~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vv~vs~GS~~~~~~~~~~~~~~al~~~~~~~iw~~~~ 309 (468)
....++++.|||++...... ...+++|.+|||++++++||||||||+...+.+++.+++.+|+..+.+|+|+++.
T Consensus 221 ~~~~~~v~~VGPL~~~~~~~-----~~~~~~cl~WLD~q~~~sVvyvsfGS~~~~~~~q~~ela~gL~~s~~pflwv~r~ 295 (453)
T PLN02764 221 KHCRKKVLLTGPVFPEPDKT-----RELEERWVKWLSGYEPDSVVFCALGSQVILEKDQFQELCLGMELTGSPFLVAVKP 295 (453)
T ss_pred hhcCCcEEEeccCccCcccc-----ccchhHHHHHHhCCCCCceEEEeecccccCCHHHHHHHHHHHHhCCCCeEEEEeC
Confidence 63235799999997542110 1235689999999999999999999999999999999999999999999999985
Q ss_pred CCCCCccccccccCCCCCCchhHHHHhcCCeEEE-EeccHHHhhhccccceeeeccCchhHHHHHhcCCcEEeccCcccc
Q 045570 310 SSPKDEVSAHRYVTNNGVFPEGFLERIKGRGMIW-GWVPQVEILAHKAIGGFVSHCGWNSILESLWYGVPIATWPIYAEQ 388 (468)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~v~-~~vpq~~iL~~~~~~~~i~HgG~~s~~eal~~GvP~v~~P~~~DQ 388 (468)
.... .+....+|++|+++.++++.++ +|+||.+||+|+++++|||||||||++||+++|||||++|++.||
T Consensus 296 ~~~~--------~~~~~~lp~~f~~r~~grG~v~~~W~PQ~~vL~h~~v~~FvtH~G~nS~~Eal~~GVP~l~~P~~~DQ 367 (453)
T PLN02764 296 PRGS--------STIQEALPEGFEERVKGRGVVWGGWVQQPLILSHPSVGCFVSHCGFGSMWESLLSDCQIVLVPQLGDQ 367 (453)
T ss_pred CCCC--------cchhhhCCcchHhhhccCCcEEeCCCCHHHHhcCcccCeEEecCCchHHHHHHHcCCCEEeCCcccch
Confidence 3100 0112458999999999988877 999999999999999999999999999999999999999999999
Q ss_pred chhHHHHHhhhceEEEeeeccccCCcccChhHHHHHHHHHhcCc----HHHHHHHHHHHHHHHHhhhcCCChHHHHHHHH
Q 045570 389 QLNAFRMVKELGLALDLRLDYRVGSDLVMAGDIESAVRCLMDGE----NKIRKKVKEMAEISRKSLMEGGSSFNSIGQFI 464 (468)
Q Consensus 389 ~~na~~~~~~~G~G~~~~~~~~~~~~~~~~~~l~~av~~vl~~~----~~~~~~a~~l~~~~~~~~~~gg~~~~~~~~~~ 464 (468)
+.||+++++.||+|+.+..+ +.+.+++++|+++|+++|+++ .++|+|++++++.++ +||||..++++||
T Consensus 368 ~~na~~l~~~~g~gv~~~~~---~~~~~~~e~i~~av~~vm~~~~~~g~~~r~~a~~~~~~~~----~~GSS~~~l~~lv 440 (453)
T PLN02764 368 VLNTRLLSDELKVSVEVARE---ETGWFSKESLRDAINSVMKRDSEIGNLVKKNHTKWRETLA----SPGLLTGYVDNFI 440 (453)
T ss_pred HHHHHHHHHHhceEEEeccc---cCCccCHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHH----hcCCHHHHHHHHH
Confidence 99999998778999987532 013689999999999999732 248888888888775 4899999999999
Q ss_pred Hhh
Q 045570 465 SLN 467 (468)
Q Consensus 465 ~~~ 467 (468)
+++
T Consensus 441 ~~~ 443 (453)
T PLN02764 441 ESL 443 (453)
T ss_pred HHH
Confidence 986
No 20
>PLN00414 glycosyltransferase family protein
Probab=100.00 E-value=3.1e-67 Score=516.44 Aligned_cols=421 Identities=24% Similarity=0.359 Sum_probs=308.4
Q ss_pred CcEEEEEcCCCCCChHHHHHHHHHHHhCCCCeEEEEEecCCCCChhhhhhhcccCCCCCCeEEEeCC----CCCCCCCCC
Q 045570 3 KAELIFVPSPGIGHLVSTLEFAKHLTDRDDRISVTILSMKLAVAPWVDAYTKSLTDSQPRICVIDLP----PVDPPLPDV 78 (468)
Q Consensus 3 k~~i~~~~~p~~GH~~P~l~La~~L~~rGH~~~Vt~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~----~~~~~~~~~ 78 (468)
|+||+++|+|++||++||++||+.|+++|+. ||+++++.++. .++.......+++|..++ ++.|++.+.
T Consensus 4 ~~HVvlvPfpaqGHi~PmL~LAk~Las~G~~--VT~vtt~~~~~-----~i~~~~~~~~~i~~~~i~lP~~dGLP~g~e~ 76 (446)
T PLN00414 4 KFHAFMYPWFGFGHMIPYLHLANKLAEKGHR--VTFFLPKKAHK-----QLQPLNLFPDSIVFEPLTLPPVDGLPFGAET 76 (446)
T ss_pred CCEEEEecCcccchHHHHHHHHHHHHhCCCE--EEEEeCCchhh-----hhcccccCCCceEEEEecCCCcCCCCCcccc
Confidence 7799999999999999999999999999966 99999874332 122211222358886554 233444322
Q ss_pred cCCChHHHHHHHHHhhchhHHHHHHhhhccCCCCccEEEEcCCcchHHHHHHHcCCCeEEEeCchhHHHHHHhhhhcccc
Q 045570 79 LKKSPEYFISLVVESHLPNVKNIVSSRSNSGSLQVTGLVLDFFCVSMVDIAKELSLPSYMFLTSNMGFLRLMLYLPTRQD 158 (468)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~D~vv~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~~ 158 (468)
.. +........+......+...++++++. .++||||+|+ ++|+..+|+++|||++.|++++++.++.++++..
T Consensus 77 ~~-~l~~~~~~~~~~a~~~l~~~l~~~L~~--~~p~cVV~D~-~~wa~~vA~~lgIP~~~F~~~~a~~~~~~~~~~~--- 149 (446)
T PLN00414 77 AS-DLPNSTKKPIFDAMDLLRDQIEAKVRA--LKPDLIFFDF-VHWVPEMAKEFGIKSVNYQIISAACVAMVLAPRA--- 149 (446)
T ss_pred cc-cchhhHHHHHHHHHHHHHHHHHHHHhc--CCCeEEEECC-chhHHHHHHHhCCCEEEEecHHHHHHHHHhCcHh---
Confidence 11 111111111122222344444444331 3689999996 8899999999999999999999988888766210
Q ss_pred cccccccCCCCccccCCCCC---CCCCCc--CCCccccCCcchHHHHHHHhhccCCcEEEEcCccccCHHHHHHhhcCCC
Q 045570 159 RISTVFESSDDELLIPGITS---PVPVCV--MPSCLFNKDGGHATLVKLAQRFKDVDGIIVNTFHELEPYAVNAFSGDLN 233 (468)
Q Consensus 159 ~~~~~~~~~~~~~~~p~~~~---~~~~~~--l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~~~~~~~~~ 233 (468)
. . ...+|+++. .++..+ ++..+. . ....+.+......+++++++|||+|||+.++..+.....
T Consensus 150 ~----~-----~~~~pg~p~~~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~~~~~~~vlvNTf~eLE~~~~~~~~~~~~ 217 (446)
T PLN00414 150 E----L-----GFPPPDYPLSKVALRGHDANVCSLFA-N--SHELFGLITKGLKNCDVVSIRTCVELEGNLCDFIERQCQ 217 (446)
T ss_pred h----c-----CCCCCCCCCCcCcCchhhcccchhhc-c--cHHHHHHHHHhhccCCEEEEechHHHHHHHHHHHHHhcC
Confidence 0 0 011345432 122122 122121 1 123444555566778999999999999999998876333
Q ss_pred CCeEEeccccCCCCCCCCCCChhcHhHHHHhhhcCCCCcEEEEeccCccccCHHHHHHHHHHHHhCCCcEEEEEecCCCC
Q 045570 234 PPLYTAGPVLHLKSQPNPDLDEAQYQKIFQWLDDLAESSVVFLCFGSSGSFDVAQVKEIAIGLERSGYNFLWSLRVSSPK 313 (468)
Q Consensus 234 p~v~~vGpl~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vv~vs~GS~~~~~~~~~~~~~~al~~~~~~~iw~~~~~~~~ 313 (468)
++++.|||+....... .. ...+++|.+|||.+++++||||||||+...+.+++.+++.+|+..+.+|+|+++.....
T Consensus 218 ~~v~~VGPl~~~~~~~-~~--~~~~~~~~~WLD~q~~~sVvyvsfGS~~~~~~~q~~e~a~gL~~s~~~Flwvvr~~~~~ 294 (446)
T PLN00414 218 RKVLLTGPMLPEPQNK-SG--KPLEDRWNHWLNGFEPGSVVFCAFGTQFFFEKDQFQEFCLGMELTGLPFLIAVMPPKGS 294 (446)
T ss_pred CCeEEEcccCCCcccc-cC--cccHHHHHHHHhcCCCCceEEEeecccccCCHHHHHHHHHHHHHcCCCeEEEEecCCCc
Confidence 5799999997533110 00 12346799999999999999999999999999999999999999999999999853110
Q ss_pred CccccccccCCCCCCchhHHHHhcCCeEEE-EeccHHHhhhccccceeeeccCchhHHHHHhcCCcEEeccCccccchhH
Q 045570 314 DEVSAHRYVTNNGVFPEGFLERIKGRGMIW-GWVPQVEILAHKAIGGFVSHCGWNSILESLWYGVPIATWPIYAEQQLNA 392 (468)
Q Consensus 314 ~~~~~~~~~~~~~~lp~~~~~~~~~~~~v~-~~vpq~~iL~~~~~~~~i~HgG~~s~~eal~~GvP~v~~P~~~DQ~~na 392 (468)
.+..+.+|++|+++++++++++ +|+||.+||+|+++++|||||||||++||+++|||||++|++.||+.||
T Consensus 295 --------~~~~~~lp~~f~~r~~~~g~vv~~w~PQ~~vL~h~~v~~fvtH~G~nS~~Ea~~~GvP~l~~P~~~dQ~~na 366 (446)
T PLN00414 295 --------STVQEALPEGFEERVKGRGIVWEGWVEQPLILSHPSVGCFVNHCGFGSMWESLVSDCQIVFIPQLADQVLIT 366 (446)
T ss_pred --------ccchhhCChhHHHHhcCCCeEEeccCCHHHHhcCCccceEEecCchhHHHHHHHcCCCEEecCcccchHHHH
Confidence 0112458999999999999988 9999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhhceEEEeeeccccCCcccChhHHHHHHHHHhcCc----HHHHHHHHHHHHHHHHhhhcCCChHHHHHHHHHhh
Q 045570 393 FRMVKELGLALDLRLDYRVGSDLVMAGDIESAVRCLMDGE----NKIRKKVKEMAEISRKSLMEGGSSFNSIGQFISLN 467 (468)
Q Consensus 393 ~~~~~~~G~G~~~~~~~~~~~~~~~~~~l~~av~~vl~~~----~~~~~~a~~l~~~~~~~~~~gg~~~~~~~~~~~~~ 467 (468)
+++++.||+|+.+.++ +.+.+++++|+++++++|+++ .+||+||+++++.+. ++||+| .++++||+++
T Consensus 367 ~~~~~~~g~g~~~~~~---~~~~~~~~~i~~~v~~~m~~~~e~g~~~r~~a~~~~~~~~---~~gg~s-s~l~~~v~~~ 438 (446)
T PLN00414 367 RLLTEELEVSVKVQRE---DSGWFSKESLRDTVKSVMDKDSEIGNLVKRNHKKLKETLV---SPGLLS-GYADKFVEAL 438 (446)
T ss_pred HHHHHHhCeEEEeccc---cCCccCHHHHHHHHHHHhcCChhhHHHHHHHHHHHHHHHH---cCCCcH-HHHHHHHHHH
Confidence 9998778999998642 013589999999999999732 259999999999864 458744 3489999976
No 21
>PLN03007 UDP-glucosyltransferase family protein
Probab=100.00 E-value=1.8e-66 Score=519.98 Aligned_cols=447 Identities=28% Similarity=0.456 Sum_probs=318.7
Q ss_pred CCcEEEEEcCCCCCChHHHHHHHHHHHhCCCCeEEEEEecCCCCChhhhhhhccc----CCCCCCeEEEeCC---CCCCC
Q 045570 2 KKAELIFVPSPGIGHLVSTLEFAKHLTDRDDRISVTILSMKLAVAPWVDAYTKSL----TDSQPRICVIDLP---PVDPP 74 (468)
Q Consensus 2 ~k~~i~~~~~p~~GH~~P~l~La~~L~~rGH~~~Vt~~~~~~~~~~~~~~~~~~~----~~~~~~i~~~~~~---~~~~~ 74 (468)
+++||+++|+|++||++|++.||+.|++|||+ |||++++.+... +....... ......+.+..+| ++.|+
T Consensus 4 ~~~hVvlvp~pa~GHi~P~L~LAk~L~~rG~~--VT~vtt~~~~~~-i~~~~a~~~~~~~~~~~~~~~~~~p~~~~glP~ 80 (482)
T PLN03007 4 EKLHILFFPFMAHGHMIPTLDMAKLFSSRGAK--STILTTPLNAKI-FEKPIEAFKNLNPGLEIDIQIFNFPCVELGLPE 80 (482)
T ss_pred CCcEEEEECCCccccHHHHHHHHHHHHhCCCE--EEEEECCCchhh-hhhhhhhhcccCCCCcceEEEeeCCCCcCCCCC
Confidence 36799999999999999999999999999977 999999854421 11111111 0011134445555 23444
Q ss_pred CCCCcCC-------ChHHHHHHHHHhhchhHHHHHHhhhccCCCCccEEEEcCCcchHHHHHHHcCCCeEEEeCchhHHH
Q 045570 75 LPDVLKK-------SPEYFISLVVESHLPNVKNIVSSRSNSGSLQVTGLVLDFFCVSMVDIAKELSLPSYMFLTSNMGFL 147 (468)
Q Consensus 75 ~~~~~~~-------~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~D~vv~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~ 147 (468)
+.+.... ....++..+. ...+.+.+.+++++++ .++||||+|.+++|+..+|+++|||++.|++++++.+
T Consensus 81 g~e~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~l~~~l~~--~~~~~IV~D~~~~w~~~vA~~lgIP~v~f~~~~a~~~ 157 (482)
T PLN03007 81 GCENVDFITSNNNDDSGDLFLKFL-FSTKYFKDQLEKLLET--TRPDCLVADMFFPWATEAAEKFGVPRLVFHGTGYFSL 157 (482)
T ss_pred CcccccccccccccchHHHHHHHH-HHHHHHHHHHHHHHhc--CCCCEEEECCcchhHHHHHHHhCCCeEEeecccHHHH
Confidence 4332210 1112222232 2333555555555442 3789999999999999999999999999999998776
Q ss_pred HHHhhhhcccccccccccCCCCccccCCCCC--CCCCCcCCCccccCCc-chHHHHHHHhhccCCcEEEEcCccccCHHH
Q 045570 148 RLMLYLPTRQDRISTVFESSDDELLIPGITS--PVPVCVMPSCLFNKDG-GHATLVKLAQRFKDVDGIIVNTFHELEPYA 224 (468)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~--~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~ 224 (468)
..++........ ...........+|+++. .++..+++.. .... ....+........+.+++++||++++|..+
T Consensus 158 ~~~~~~~~~~~~--~~~~~~~~~~~~pg~p~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~vl~Nt~~~le~~~ 233 (482)
T PLN03007 158 CASYCIRVHKPQ--KKVASSSEPFVIPDLPGDIVITEEQINDA--DEESPMGKFMKEVRESEVKSFGVLVNSFYELESAY 233 (482)
T ss_pred HHHHHHHhcccc--cccCCCCceeeCCCCCCccccCHHhcCCC--CCchhHHHHHHHHHhhcccCCEEEEECHHHHHHHH
Confidence 665543211100 00111112234677752 2333334421 1111 123334444566788899999999999998
Q ss_pred HHHhhcCCCCCeEEeccccCCCCCCC-----CCCChhcHhHHHHhhhcCCCCcEEEEeccCccccCHHHHHHHHHHHHhC
Q 045570 225 VNAFSGDLNPPLYTAGPVLHLKSQPN-----PDLDEAQYQKIFQWLDDLAESSVVFLCFGSSGSFDVAQVKEIAIGLERS 299 (468)
Q Consensus 225 ~~~~~~~~~p~v~~vGpl~~~~~~~~-----~~~~~~~~~~~~~~l~~~~~~~vv~vs~GS~~~~~~~~~~~~~~al~~~ 299 (468)
...+.+...+++++|||+........ .......+.+|.+|||++++++||||||||+...+.+++.+++.+|+.+
T Consensus 234 ~~~~~~~~~~~~~~VGPl~~~~~~~~~~~~~~~~~~~~~~~~~~wLd~~~~~svvyvsfGS~~~~~~~~~~~~~~~l~~~ 313 (482)
T PLN03007 234 ADFYKSFVAKRAWHIGPLSLYNRGFEEKAERGKKANIDEQECLKWLDSKKPDSVIYLSFGSVASFKNEQLFEIAAGLEGS 313 (482)
T ss_pred HHHHHhccCCCEEEEccccccccccccccccCCccccchhHHHHHHhcCCCCceEEEeecCCcCCCHHHHHHHHHHHHHC
Confidence 88887644457999999864321100 0000113578999999998899999999999988999999999999999
Q ss_pred CCcEEEEEecCCCCCccccccccCCCCCCchhHHHHhcCCe-EEEEeccHHHhhhccccceeeeccCchhHHHHHhcCCc
Q 045570 300 GYNFLWSLRVSSPKDEVSAHRYVTNNGVFPEGFLERIKGRG-MIWGWVPQVEILAHKAIGGFVSHCGWNSILESLWYGVP 378 (468)
Q Consensus 300 ~~~~iw~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~-~v~~~vpq~~iL~~~~~~~~i~HgG~~s~~eal~~GvP 378 (468)
+++|||+++...... +....+|++|.++..++. .+.+|+||.+||+|+++++|||||||||++||+++|||
T Consensus 314 ~~~flw~~~~~~~~~--------~~~~~lp~~~~~r~~~~g~~v~~w~PQ~~iL~h~~v~~fvtH~G~nS~~Eal~~GVP 385 (482)
T PLN03007 314 GQNFIWVVRKNENQG--------EKEEWLPEGFEERTKGKGLIIRGWAPQVLILDHQATGGFVTHCGWNSLLEGVAAGLP 385 (482)
T ss_pred CCCEEEEEecCCccc--------chhhcCCHHHHHHhccCCEEEecCCCHHHHhccCccceeeecCcchHHHHHHHcCCC
Confidence 999999998541100 111358999998876554 45599999999999999999999999999999999999
Q ss_pred EEeccCccccchhHHHHHhhhceEEEeeeccc--cCCcccChhHHHHHHHHHhcCcH---HHHHHHHHHHHHHHHhhhcC
Q 045570 379 IATWPIYAEQQLNAFRMVKELGLALDLRLDYR--VGSDLVMAGDIESAVRCLMDGEN---KIRKKVKEMAEISRKSLMEG 453 (468)
Q Consensus 379 ~v~~P~~~DQ~~na~~~~~~~G~G~~~~~~~~--~~~~~~~~~~l~~av~~vl~~~~---~~~~~a~~l~~~~~~~~~~g 453 (468)
||++|+++||+.||+++++.|++|+.+..+.. .+...+++++|+++|+++|. ++ +||+||+++++.+++++.+|
T Consensus 386 ~v~~P~~~DQ~~na~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~l~~av~~~m~-~~~~~~~r~~a~~~~~~a~~a~~~g 464 (482)
T PLN03007 386 MVTWPVGAEQFYNEKLVTQVLRTGVSVGAKKLVKVKGDFISREKVEKAVREVIV-GEEAEERRLRAKKLAEMAKAAVEEG 464 (482)
T ss_pred eeeccchhhhhhhHHHHHHhhcceeEeccccccccccCcccHHHHHHHHHHHhc-CcHHHHHHHHHHHHHHHHHHHHhCC
Confidence 99999999999999999876777776532100 01246899999999999998 55 99999999999999999999
Q ss_pred CChHHHHHHHHHhh
Q 045570 454 GSSFNSIGQFISLN 467 (468)
Q Consensus 454 g~~~~~~~~~~~~~ 467 (468)
|||++++++||+++
T Consensus 465 GsS~~~l~~~v~~~ 478 (482)
T PLN03007 465 GSSFNDLNKFMEEL 478 (482)
T ss_pred CcHHHHHHHHHHHH
Confidence 99999999999986
No 22
>PHA03392 egt ecdysteroid UDP-glucosyltransferase; Provisional
Probab=100.00 E-value=6.6e-46 Score=372.13 Aligned_cols=383 Identities=19% Similarity=0.206 Sum_probs=255.3
Q ss_pred EEEEE-cCCCCCChHHHHHHHHHHHhCCCCeEEEEEecCCCCChhhhhhhcccCCCCCCeEEEeCCCCCCC------CCC
Q 045570 5 ELIFV-PSPGIGHLVSTLEFAKHLTDRDDRISVTILSMKLAVAPWVDAYTKSLTDSQPRICVIDLPPVDPP------LPD 77 (468)
Q Consensus 5 ~i~~~-~~p~~GH~~P~l~La~~L~~rGH~~~Vt~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~------~~~ 77 (468)
+|+.+ |.++.+|..-+-+|+++|++|||+ ||++++.... ..+. ....+++...++..... ...
T Consensus 22 kIl~~~P~~~~SH~~~~~~l~~~La~rGH~--VTvi~p~~~~------~~~~--~~~~~~~~i~~~~~~~~~~~~~~~~~ 91 (507)
T PHA03392 22 RILAVFPTPAYSHHSVFKVYVEALAERGHN--VTVIKPTLRV------YYAS--HLCGNITEIDASLSVEYFKKLVKSSA 91 (507)
T ss_pred cEEEEcCCCCCcHHHHHHHHHHHHHHcCCe--EEEEeccccc------cccc--CCCCCEEEEEcCCChHHHHHHHhhhh
Confidence 47655 889999999999999999999999 9999874210 0100 01234555544321100 000
Q ss_pred Cc-----CCChHHHH----HHHHHhhchhHH-HHHHhhhccCCCCccEEEEcCCcchHHHHHHHc-CCCeEEEeCchhHH
Q 045570 78 VL-----KKSPEYFI----SLVVESHLPNVK-NIVSSRSNSGSLQVTGLVLDFFCVSMVDIAKEL-SLPSYMFLTSNMGF 146 (468)
Q Consensus 78 ~~-----~~~~~~~~----~~~~~~~~~~~~-~~l~~~~~~~~~~~D~vv~D~~~~~~~~~A~~l-giP~v~~~~~~~~~ 146 (468)
.. ..+..... ..+...+...+. ..+.+++++...++|+||+|.+..++..+|+.+ ++|.|.+++.....
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~L~~~~~kFDlvi~e~~~~c~~~la~~~~~~p~i~~ss~~~~~ 171 (507)
T PHA03392 92 VFRKRGVVADSSTVTADNYMGLVRMISDQFDLPNVKNLIANKNNKFDLLVTEAFLDYPLVFSHLFGDAPVIQISSGYGLA 171 (507)
T ss_pred HHHhhhhhhhHHHHHHHHHHHHHHHHHHHHCCHHHHHHHhcCCCceeEEEecccchhHHHHHHHhCCCCEEEEcCCCCch
Confidence 00 00000000 111111111111 112233321234799999999888888899999 99987766543321
Q ss_pred HHHHhhhhccccccccccc-CCCCccccCCCCCCCCC-CcCCCccccCCc------chHH----HHHHH-----------
Q 045570 147 LRLMLYLPTRQDRISTVFE-SSDDELLIPGITSPVPV-CVMPSCLFNKDG------GHAT----LVKLA----------- 203 (468)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~p~~~~~~~~-~~l~~~~~~~~~------~~~~----~~~~~----------- 203 (468)
... . ..+ ++.++.++|.+.....- ..+.+.+.+... .+.. ..+..
T Consensus 172 ~~~--~----------~~gg~p~~~syvP~~~~~~~~~Msf~~R~~N~~~~~~~~~~~~~~~~~~~~l~~~~f~~~~~~~ 239 (507)
T PHA03392 172 ENF--E----------TMGAVSRHPVYYPNLWRSKFGNLNVWETINEIYTELRLYNEFSLLADEQNKLLKQQFGPDTPTI 239 (507)
T ss_pred hHH--H----------hhccCCCCCeeeCCcccCCCCCCCHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHcCCCCCCH
Confidence 100 0 012 34455667765322210 011111111000 0000 00000
Q ss_pred -hhccCCcEEEEcCccccCHHHHHHhhcCCCCCeEEeccccCCCCCCCCCCChhcHhHHHHhhhcCCCCcEEEEeccCcc
Q 045570 204 -QRFKDVDGIIVNTFHELEPYAVNAFSGDLNPPLYTAGPVLHLKSQPNPDLDEAQYQKIFQWLDDLAESSVVFLCFGSSG 282 (468)
Q Consensus 204 -~~~~~~~~~~~~s~~~l~~~~~~~~~~~~~p~v~~vGpl~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vv~vs~GS~~ 282 (468)
+..++...+++|+...++.+ ++..|++++|||+....... .++++++.+|++++ ++++|||||||+.
T Consensus 240 ~~l~~~~~l~lvns~~~~d~~------rp~~p~v~~vGgi~~~~~~~-----~~l~~~l~~fl~~~-~~g~V~vS~GS~~ 307 (507)
T PHA03392 240 RELRNRVQLLFVNVHPVFDNN------RPVPPSVQYLGGLHLHKKPP-----QPLDDYLEEFLNNS-TNGVVYVSFGSSI 307 (507)
T ss_pred HHHHhCCcEEEEecCccccCC------CCCCCCeeeecccccCCCCC-----CCCCHHHHHHHhcC-CCcEEEEECCCCC
Confidence 11122345677777777665 45677799999997643222 46788999999986 4579999999986
Q ss_pred ---ccCHHHHHHHHHHHHhCCCcEEEEEecCCCCCccccccccCCCCCCchhHHHHhcCCeEEEEeccHHHhhhccccce
Q 045570 283 ---SFDVAQVKEIAIGLERSGYNFLWSLRVSSPKDEVSAHRYVTNNGVFPEGFLERIKGRGMIWGWVPQVEILAHKAIGG 359 (468)
Q Consensus 283 ---~~~~~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~v~~~vpq~~iL~~~~~~~ 359 (468)
..+.+.++.+++++++.+++|||+++... .+ ...++|+++++|+||.+||+|+++++
T Consensus 308 ~~~~~~~~~~~~~l~a~~~l~~~viw~~~~~~----------------~~----~~~p~Nv~i~~w~Pq~~lL~hp~v~~ 367 (507)
T PHA03392 308 DTNDMDNEFLQMLLRTFKKLPYNVLWKYDGEV----------------EA----INLPANVLTQKWFPQRAVLKHKNVKA 367 (507)
T ss_pred cCCCCCHHHHHHHHHHHHhCCCeEEEEECCCc----------------Cc----ccCCCceEEecCCCHHHHhcCCCCCE
Confidence 35678899999999999999999988531 11 02356899999999999999999999
Q ss_pred eeeccCchhHHHHHhcCCcEEeccCccccchhHHHHHhhhceEEEeeeccccCCcccChhHHHHHHHHHhcCcHHHHHHH
Q 045570 360 FVSHCGWNSILESLWYGVPIATWPIYAEQQLNAFRMVKELGLALDLRLDYRVGSDLVMAGDIESAVRCLMDGENKIRKKV 439 (468)
Q Consensus 360 ~i~HgG~~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~G~G~~~~~~~~~~~~~~~~~~l~~av~~vl~~~~~~~~~a 439 (468)
||||||+||++||+++|||+|++|+++||+.||+|+++. |+|+.+++ ..+++++|++||+++++ |++||+||
T Consensus 368 fItHGG~~s~~Eal~~GvP~v~iP~~~DQ~~Na~rv~~~-G~G~~l~~------~~~t~~~l~~ai~~vl~-~~~y~~~a 439 (507)
T PHA03392 368 FVTQGGVQSTDEAIDALVPMVGLPMMGDQFYNTNKYVEL-GIGRALDT------VTVSAAQLVLAIVDVIE-NPKYRKNL 439 (507)
T ss_pred EEecCCcccHHHHHHcCCCEEECCCCccHHHHHHHHHHc-CcEEEecc------CCcCHHHHHHHHHHHhC-CHHHHHHH
Confidence 999999999999999999999999999999999999887 99999985 38899999999999999 89999999
Q ss_pred HHHHHHHHHh
Q 045570 440 KEMAEISRKS 449 (468)
Q Consensus 440 ~~l~~~~~~~ 449 (468)
+++++.+++.
T Consensus 440 ~~ls~~~~~~ 449 (507)
T PHA03392 440 KELRHLIRHQ 449 (507)
T ss_pred HHHHHHHHhC
Confidence 9999999975
No 23
>PF00201 UDPGT: UDP-glucoronosyl and UDP-glucosyl transferase; InterPro: IPR002213 UDP glycosyltransferases (UGT) are a superfamily of enzymes that catalyzes the addition of the glycosyl group from a UTP-sugar to a small hydrophobic molecule. This family currently consist of: Mammalian UDP-glucuronosyl transferases (2.4.1.17 from EC) (UDPGT) []. A large family of membrane-bound microsomal enzymes which catalyze the transfer of glucuronic acid to a wide variety of exogenous and endogenous lipophilic substrates. These enzymes are of major importance in the detoxification and subsequent elimination of xenobiotics such as drugs and carcinogens. A large number of putative UDPGT from Caenorhabditis elegans. Mammalian 2-hydroxyacylsphingosine 1-beta-galactosyltransferase [] (2.4.1.45 from EC) (also known as UDP-galactose-ceramide galactosyltransferase). This enzyme catalyzes the transfer of galactose to ceramide, a key enzymatic step in the biosynthesis of galactocerebrosides, which are abundant sphingolipids of the myelin membrane of the central nervous system and peripheral nervous system. Plants flavonol O(3)-glucosyltransferase (2.4.1.91 from EC). An enzyme [] that catalyzes the transfer of glucose from UDP-glucose to a flavanol. This reaction is essential and one of the last steps in anthocyanin pigment biosynthesis. Baculoviruses ecdysteroid UDP-glucosyltransferase (2.4.1 from EC) [] (egt). This enzyme catalyzes the transfer of glucose from UDP-glucose to ectysteroids which are insect molting hormones. The expression of egt in the insect host interferes with the normal insect development by blocking the molting process. Prokaryotic zeaxanthin glucosyltransferase (2.4.1 from EC) (gene crtX), an enzyme involved in carotenoid biosynthesis and that catalyses the glycosylation reaction which converts zeaxanthin to zeaxanthin-beta-diglucoside. Streptomyces macrolide glycosyltransferases (2.4.1 from EC) []. These enzymes specifically inactivates macrolide anitibiotics via 2'-O-glycosylation using UDP-glucose. These enzymes share a conserved domain of about 50 amino acid residues located in their C-terminal section.; GO: 0016758 transferase activity, transferring hexosyl groups, 0008152 metabolic process; PDB: 3HBJ_A 3HBF_A 2PQ6_A 3IA7_B 3RSC_A 3IAA_B 2IYA_A 2IYF_B 2O6L_A 2VCH_A ....
Probab=100.00 E-value=1.2e-47 Score=391.54 Aligned_cols=387 Identities=20% Similarity=0.258 Sum_probs=214.6
Q ss_pred EEEEEcCCCCCChHHHHHHHHHHHhCCCCeEEEEEecCCCCChhhhhhhcccCCCCCCeEEEeCCCCCCCCC-CCcCCCh
Q 045570 5 ELIFVPSPGIGHLVSTLEFAKHLTDRDDRISVTILSMKLAVAPWVDAYTKSLTDSQPRICVIDLPPVDPPLP-DVLKKSP 83 (468)
Q Consensus 5 ~i~~~~~p~~GH~~P~l~La~~L~~rGH~~~Vt~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~-~~~~~~~ 83 (468)
||+++|. +.+|+.++.+|+++|++|||+ ||++++... .... ......+++..++...+... .......
T Consensus 2 kvLv~p~-~~SH~~~~~~l~~~L~~rGH~--VTvl~~~~~------~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 70 (500)
T PF00201_consen 2 KVLVFPM-AYSHFIFMRPLAEELAERGHN--VTVLTPSPS------SSLN--PSKPSNIRFETYPDPYPEEEFEEIFPEF 70 (500)
T ss_dssp -----------SHHHHHHHHHHHHHH-TT--SEEEHHHHH------HT--------S-CCEEEE-----TT------TTH
T ss_pred EEEEeCC-CcCHHHHHHHHHHHHHhcCCc--eEEEEeecc------cccc--cccccceeeEEEcCCcchHHHhhhhHHH
Confidence 4788885 789999999999999999999 999987410 0111 11233456665554432211 1110111
Q ss_pred H-HHHH---------HHHH---hhchhHHHHHHhhhcc-------CCCCccEEEEcCCcchHHHHHHHcCCCeEEEeCch
Q 045570 84 E-YFIS---------LVVE---SHLPNVKNIVSSRSNS-------GSLQVTGLVLDFFCVSMVDIAKELSLPSYMFLTSN 143 (468)
Q Consensus 84 ~-~~~~---------~~~~---~~~~~~~~~l~~~~~~-------~~~~~D~vv~D~~~~~~~~~A~~lgiP~v~~~~~~ 143 (468)
. ..+. .... .........+++++.+ ...++|++|+|.+..++..+|+.+++|.+.+.+..
T Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~~l~d~~l~~~l~~~~fDlvI~d~f~~c~~~la~~l~iP~i~~~s~~ 150 (500)
T PF00201_consen 71 ISKFFSESSFANSFWEMFKMLNAFFDFFSKSCEDLLSDPELMEQLKSEKFDLVISDAFDPCGLALAHYLGIPVIIISSST 150 (500)
T ss_dssp HHHHHHHHCCHHHHHHHHHHHHCHHHS----E--EEEETTSTTHHHHHHHCT-EEEEEESSHHHHHHHHHHTHHHHHHCC
T ss_pred HHHHhhhcccchhHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhhccccceEeeccchhHHHHHHhcCCeEEEeccc
Confidence 0 1111 0100 0011111111111111 01268999999988888899999999976433221
Q ss_pred hHHHHHHhhhhcccccccccccCCCCccccCCCCCCCCC-CcCCCccccCCc-c-hHHHHHHHhhccCCcEEEEcC----
Q 045570 144 MGFLRLMLYLPTRQDRISTVFESSDDELLIPGITSPVPV-CVMPSCLFNKDG-G-HATLVKLAQRFKDVDGIIVNT---- 216 (468)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~-~~l~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~s---- 216 (468)
.. . ... ....+.+..+.++|.....+.. ..+.+.+.+... . .....+...........-...
T Consensus 151 ~~-------~-~~~---~~~~g~p~~psyvP~~~s~~~~~msf~~Ri~N~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (500)
T PF00201_consen 151 PM-------Y-DLS---SFSGGVPSPPSYVPSMFSDFSDRMSFWQRIKNFLFYLYFRFIFRYFFSPQDKLYKKYFGFPFS 219 (500)
T ss_dssp SC-------S-CCT---CCTSCCCTSTTSTTCBCCCSGTTSSSST--TTSHHHHHHHHHHHHGGGS-TTS-EEESS-GGG
T ss_pred cc-------c-hhh---hhccCCCCChHHhccccccCCCccchhhhhhhhhhhhhhccccccchhhHHHHHhhhcccccc
Confidence 10 0 000 0001223334444543221110 011111111100 0 011111111111111111111
Q ss_pred ccccCHHHHHHhh---------cCCCCCeEEeccccCCCCCCCCCCChhcHhHHHHhhhcCCCCcEEEEeccCccccCHH
Q 045570 217 FHELEPYAVNAFS---------GDLNPPLYTAGPVLHLKSQPNPDLDEAQYQKIFQWLDDLAESSVVFLCFGSSGSFDVA 287 (468)
Q Consensus 217 ~~~l~~~~~~~~~---------~~~~p~v~~vGpl~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vv~vs~GS~~~~~~~ 287 (468)
..++.......+. ++..|++.++|++....+ ++++.++..|+++..++++|||||||+....++
T Consensus 220 ~~~~~~~~~l~l~ns~~~ld~prp~~p~v~~vGgl~~~~~-------~~l~~~~~~~~~~~~~~~vv~vsfGs~~~~~~~ 292 (500)
T PF00201_consen 220 FRELLSNASLVLINSHPSLDFPRPLLPNVVEVGGLHIKPA-------KPLPEELWNFLDSSGKKGVVYVSFGSIVSSMPE 292 (500)
T ss_dssp CHHHHHHHHHCCSSTEEE----HHHHCTSTTGCGC-S-----------TCHHHHHHHTSTTTTTEEEEEE-TSSSTT-HH
T ss_pred cHHHHHHHHHHhhhccccCcCCcchhhcccccCccccccc-------cccccccchhhhccCCCCEEEEecCcccchhHH
Confidence 1111111121111 124567888999876544 567889999999855678999999998754444
Q ss_pred -HHHHHHHHHHhCCCcEEEEEecCCCCCccccccccCCCCCCchhHHHHhcCCeEEEEeccHHHhhhccccceeeeccCc
Q 045570 288 -QVKEIAIGLERSGYNFLWSLRVSSPKDEVSAHRYVTNNGVFPEGFLERIKGRGMIWGWVPQVEILAHKAIGGFVSHCGW 366 (468)
Q Consensus 288 -~~~~~~~al~~~~~~~iw~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~v~~~vpq~~iL~~~~~~~~i~HgG~ 366 (468)
..++++++|++.+++|||++++.. +. ..+.|+++++|+||.+||+|+++++||||||+
T Consensus 293 ~~~~~~~~~~~~~~~~~iW~~~~~~-----------------~~----~l~~n~~~~~W~PQ~~lL~hp~v~~fitHgG~ 351 (500)
T PF00201_consen 293 EKLKEIAEAFENLPQRFIWKYEGEP-----------------PE----NLPKNVLIVKWLPQNDLLAHPRVKLFITHGGL 351 (500)
T ss_dssp HHHHHHHHHHHCSTTEEEEEETCSH-----------------GC----HHHTTEEEESS--HHHHHTSTTEEEEEES--H
T ss_pred HHHHHHHHHHhhCCCcccccccccc-----------------cc----cccceEEEeccccchhhhhcccceeeeecccc
Confidence 488899999999999999987531 11 24568999999999999999999999999999
Q ss_pred hhHHHHHhcCCcEEeccCccccchhHHHHHhhhceEEEeeeccccCCcccChhHHHHHHHHHhcCcHHHHHHHHHHHHHH
Q 045570 367 NSILESLWYGVPIATWPIYAEQQLNAFRMVKELGLALDLRLDYRVGSDLVMAGDIESAVRCLMDGENKIRKKVKEMAEIS 446 (468)
Q Consensus 367 ~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~G~G~~~~~~~~~~~~~~~~~~l~~av~~vl~~~~~~~~~a~~l~~~~ 446 (468)
||++||+++|||||++|+++||+.||+++++. |+|+.++++ .+|+++|.+||+++|+ |++|++||+++++++
T Consensus 352 ~s~~Ea~~~gvP~l~~P~~~DQ~~na~~~~~~-G~g~~l~~~------~~~~~~l~~ai~~vl~-~~~y~~~a~~ls~~~ 423 (500)
T PF00201_consen 352 NSTQEALYHGVPMLGIPLFGDQPRNAARVEEK-GVGVVLDKN------DLTEEELRAAIREVLE-NPSYKENAKRLSSLF 423 (500)
T ss_dssp HHHHHHHHCT--EEE-GCSTTHHHHHHHHHHT-TSEEEEGGG------C-SHHHHHHHHHHHHH-SHHHHHHHHHHHHTT
T ss_pred chhhhhhhccCCccCCCCcccCCccceEEEEE-eeEEEEEec------CCcHHHHHHHHHHHHh-hhHHHHHHHHHHHHH
Confidence 99999999999999999999999999999998 999999853 8999999999999999 899999999999999
Q ss_pred HHh
Q 045570 447 RKS 449 (468)
Q Consensus 447 ~~~ 449 (468)
++.
T Consensus 424 ~~~ 426 (500)
T PF00201_consen 424 RDR 426 (500)
T ss_dssp T--
T ss_pred hcC
Confidence 876
No 24
>TIGR01426 MGT glycosyltransferase, MGT family. This model describes the MGT (macroside glycosyltransferase) subfamily of the UDP-glucuronosyltransferase family. Members include a number of glucosyl transferases for macrolide antibiotic inactivation, but also include transferases of glucose-related sugars for macrolide antibiotic production.
Probab=100.00 E-value=4.7e-42 Score=339.51 Aligned_cols=357 Identities=19% Similarity=0.263 Sum_probs=234.0
Q ss_pred EcCCCCCChHHHHHHHHHHHhCCCCeEEEEEecCCCCChhhhhhhcccCCCCCCeEEEeCCCCCCC--CC-CCcCCChHH
Q 045570 9 VPSPGIGHLVSTLEFAKHLTDRDDRISVTILSMKLAVAPWVDAYTKSLTDSQPRICVIDLPPVDPP--LP-DVLKKSPEY 85 (468)
Q Consensus 9 ~~~p~~GH~~P~l~La~~L~~rGH~~~Vt~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~--~~-~~~~~~~~~ 85 (468)
+.+|++||++|+++||++|++|||+ |++++++ .+...++. .+++|..++..... .. +....+...
T Consensus 1 ~~~p~~Ghv~P~l~lA~~L~~~Gh~--V~~~~~~-----~~~~~v~~-----~G~~~~~~~~~~~~~~~~~~~~~~~~~~ 68 (392)
T TIGR01426 1 FNIPAHGHVNPTLGVVEELVARGHR--VTYATTE-----EFAERVEA-----AGAEFVLYGSALPPPDNPPENTEEEPID 68 (392)
T ss_pred CCCCccccccccHHHHHHHHhCCCe--EEEEeCH-----HHHHHHHH-----cCCEEEecCCcCccccccccccCcchHH
Confidence 4689999999999999999999999 9999997 33333432 36788877754322 11 000112233
Q ss_pred HHHHHHHhhchhHHHHHHhhhccCCCCccEEEEcCCcchHHHHHHHcCCCeEEEeCchhHHHHHHhhhhccccccccccc
Q 045570 86 FISLVVESHLPNVKNIVSSRSNSGSLQVTGLVLDFFCVSMVDIAKELSLPSYMFLTSNMGFLRLMLYLPTRQDRISTVFE 165 (468)
Q Consensus 86 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~D~vv~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (468)
....+...+...+..+.+.+ + ..+||+||+|.+++++..+|+++|||++.+++.... +.. .++.
T Consensus 69 ~~~~~~~~~~~~~~~l~~~~-~--~~~pDlVi~d~~~~~~~~~A~~~giP~v~~~~~~~~--~~~-~~~~---------- 132 (392)
T TIGR01426 69 IIEKLLDEAEDVLPQLEEAY-K--GDRPDLIVYDIASWTGRLLARKWDVPVISSFPTFAA--NEE-FEEM---------- 132 (392)
T ss_pred HHHHHHHHHHHHHHHHHHHh-c--CCCCCEEEECCccHHHHHHHHHhCCCEEEEehhhcc--ccc-cccc----------
Confidence 33333333333333322222 2 348999999999889999999999999987543210 000 0000
Q ss_pred CCCCccccCCCCCCCCCCcCCCccccCCcchHHHHHHHhhccCCcEE----------------EEcCccccCHHHHHHhh
Q 045570 166 SSDDELLIPGITSPVPVCVMPSCLFNKDGGHATLVKLAQRFKDVDGI----------------IVNTFHELEPYAVNAFS 229 (468)
Q Consensus 166 ~~~~~~~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------~~~s~~~l~~~~~~~~~ 229 (468)
..+ ..+.+ +........ ....+.+..+..++..|+ +..+...+.+. .
T Consensus 133 --~~~-~~~~~---~~~~~~~~~------~~~~~~~~~~~~r~~~gl~~~~~~~~~~~~~~~~l~~~~~~l~~~-----~ 195 (392)
T TIGR01426 133 --VSP-AGEGS---AEEGAIAER------GLAEYVARLSALLEEHGITTPPVEFLAAPRRDLNLVYTPKAFQPA-----G 195 (392)
T ss_pred --ccc-cchhh---hhhhccccc------hhHHHHHHHHHHHHHhCCCCCCHHHHhcCCcCcEEEeCChHhCCC-----c
Confidence 000 00000 000000000 011111112222211111 11111111111 1
Q ss_pred cCCCCCeEEeccccCCCCCCCCCCChhcHhHHHHhhhcCCCCcEEEEeccCccccCHHHHHHHHHHHHhCCCcEEEEEec
Q 045570 230 GDLNPPLYTAGPVLHLKSQPNPDLDEAQYQKIFQWLDDLAESSVVFLCFGSSGSFDVAQVKEIAIGLERSGYNFLWSLRV 309 (468)
Q Consensus 230 ~~~~p~v~~vGpl~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vv~vs~GS~~~~~~~~~~~~~~al~~~~~~~iw~~~~ 309 (468)
..+.++++++||+...... ...|+...+++++|||||||+.....+.++++++++.+.+.++||..+.
T Consensus 196 ~~~~~~~~~~Gp~~~~~~~------------~~~~~~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~g~ 263 (392)
T TIGR01426 196 ETFDDSFTFVGPCIGDRKE------------DGSWERPGDGRPVVLISLGTVFNNQPSFYRTCVEAFRDLDWHVVLSVGR 263 (392)
T ss_pred cccCCCeEEECCCCCCccc------------cCCCCCCCCCCCEEEEecCccCCCCHHHHHHHHHHHhcCCCeEEEEECC
Confidence 1123458999998654321 1136665566789999999987666678888999999999999999875
Q ss_pred CCCCCccccccccCCCCCCchhHHHHhcCCeEEEEeccHHHhhhccccceeeeccCchhHHHHHhcCCcEEeccCccccc
Q 045570 310 SSPKDEVSAHRYVTNNGVFPEGFLERIKGRGMIWGWVPQVEILAHKAIGGFVSHCGWNSILESLWYGVPIATWPIYAEQQ 389 (468)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~v~~~vpq~~iL~~~~~~~~i~HgG~~s~~eal~~GvP~v~~P~~~DQ~ 389 (468)
... ...+ ...++|+.+.+|+||.++|+++++ ||||||+||++|++++|+|+|++|...||+
T Consensus 264 ~~~----------------~~~~-~~~~~~v~~~~~~p~~~ll~~~~~--~I~hgG~~t~~Eal~~G~P~v~~p~~~dq~ 324 (392)
T TIGR01426 264 GVD----------------PADL-GELPPNVEVRQWVPQLEILKKADA--FITHGGMNSTMEALFNGVPMVAVPQGADQP 324 (392)
T ss_pred CCC----------------hhHh-ccCCCCeEEeCCCCHHHHHhhCCE--EEECCCchHHHHHHHhCCCEEecCCcccHH
Confidence 410 0011 123468899999999999999998 999999999999999999999999999999
Q ss_pred hhHHHHHhhhceEEEeeeccccCCcccChhHHHHHHHHHhcCcHHHHHHHHHHHHHHHHh
Q 045570 390 LNAFRMVKELGLALDLRLDYRVGSDLVMAGDIESAVRCLMDGENKIRKKVKEMAEISRKS 449 (468)
Q Consensus 390 ~na~~~~~~~G~G~~~~~~~~~~~~~~~~~~l~~av~~vl~~~~~~~~~a~~l~~~~~~~ 449 (468)
.||+++++. |+|+.+.. ..+++++|.++|+++|+ |++|+++++++++.+++.
T Consensus 325 ~~a~~l~~~-g~g~~l~~------~~~~~~~l~~ai~~~l~-~~~~~~~~~~l~~~~~~~ 376 (392)
T TIGR01426 325 MTARRIAEL-GLGRHLPP------EEVTAEKLREAVLAVLS-DPRYAERLRKMRAEIREA 376 (392)
T ss_pred HHHHHHHHC-CCEEEecc------ccCCHHHHHHHHHHHhc-CHHHHHHHHHHHHHHHHc
Confidence 999999886 99998873 47899999999999999 799999999999999875
No 25
>KOG1192 consensus UDP-glucuronosyl and UDP-glucosyl transferase [Carbohydrate transport and metabolism; Energy production and conversion]
Probab=100.00 E-value=8.7e-44 Score=363.18 Aligned_cols=400 Identities=28% Similarity=0.394 Sum_probs=252.6
Q ss_pred CcEEEEEcCCCCCChHHHHHHHHHHHhCCCCeEEEEEecCCCCChhhhhhhcccC---CCCCCeEEEeCCCCCCCCCCCc
Q 045570 3 KAELIFVPSPGIGHLVSTLEFAKHLTDRDDRISVTILSMKLAVAPWVDAYTKSLT---DSQPRICVIDLPPVDPPLPDVL 79 (468)
Q Consensus 3 k~~i~~~~~p~~GH~~P~l~La~~L~~rGH~~~Vt~~~~~~~~~~~~~~~~~~~~---~~~~~i~~~~~~~~~~~~~~~~ 79 (468)
+.|++++++|++||++|++.||+.|+++||+ ||++++.......... ..... .......+...++..+...+..
T Consensus 5 ~~~~il~~~p~~sH~~~~~~la~~L~~~gh~--vt~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (496)
T KOG1192|consen 5 KAHNILVPFPGQSHLNPMLQLAKRLAERGHN--VTVVTPSFNALKLSKS-SKSKSIKKINPPPFEFLTIPDGLPEGWEDD 81 (496)
T ss_pred cceeEEEECCcccHHHHHHHHHHHHHHcCCc--eEEEEeechhcccCCc-ccceeeeeeecChHHhhhhhhhhccchHHH
Confidence 4689999999999999999999999999999 9999986332211000 00000 0000111111111112222110
Q ss_pred CCChHHHHHHHHHhhchhHHHHHHhhhccCCCCccEEEEcCCcchHHHHHHHcC-CCeEEEeCchhHHHHHHhhhhcccc
Q 045570 80 KKSPEYFISLVVESHLPNVKNIVSSRSNSGSLQVTGLVLDFFCVSMVDIAKELS-LPSYMFLTSNMGFLRLMLYLPTRQD 158 (468)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~D~vv~D~~~~~~~~~A~~lg-iP~v~~~~~~~~~~~~~~~~~~~~~ 158 (468)
..........+...+...+.+...........++|++|+|.+..|...+|.... ++..++++.++.......+.+
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~d~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~g~~~~---- 157 (496)
T KOG1192|consen 82 DLDISESLLELNKTCEDLLRDPLEKLLLLKSEKFDLIISDPFLGLFLLLAIPSFVIPLLSFPTSSAVLLALGLPSP---- 157 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHhchHHHHHHhhcCCccEEEechhhHHHHHhcccceEEEeecccCchHHHHhcCCcCc----
Confidence 000011123334444445555444433222234999999998778777777765 998888877765444333221
Q ss_pred cccccccCCCCccccCCCCCCCCC--CcCCCccccCCc-chH-------------HHH-HHHhhc----cCCcEEEEcC-
Q 045570 159 RISTVFESSDDELLIPGITSPVPV--CVMPSCLFNKDG-GHA-------------TLV-KLAQRF----KDVDGIIVNT- 216 (468)
Q Consensus 159 ~~~~~~~~~~~~~~~p~~~~~~~~--~~l~~~~~~~~~-~~~-------------~~~-~~~~~~----~~~~~~~~~s- 216 (468)
..++|........ ..++....+... ... ... ...... ....+++.++
T Consensus 158 -----------~~~~p~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 226 (496)
T KOG1192|consen 158 -----------LSYVPSPFSLSSGDDMSFPERVPNLIKKDLPSFLFSLSDDRKQDKISKELLGDILNWKPTASGIIVNAS 226 (496)
T ss_pred -----------ccccCcccCccccccCcHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHhCCCcccccccHHHhhhcCe
Confidence 1122222111100 011111100000 000 000 000000 1222455555
Q ss_pred ccccCHHHHHHhh-cCCCCCeEEeccccCCCCCCCCCCChhcHhHHHHhhhcCCCC--cEEEEeccCcc---ccCHHHHH
Q 045570 217 FHELEPYAVNAFS-GDLNPPLYTAGPVLHLKSQPNPDLDEAQYQKIFQWLDDLAES--SVVFLCFGSSG---SFDVAQVK 290 (468)
Q Consensus 217 ~~~l~~~~~~~~~-~~~~p~v~~vGpl~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--~vv~vs~GS~~---~~~~~~~~ 290 (468)
+..++......+. ....|++++|||+....... ..+.+.+|++..+.. ++|||||||+. ..+.++..
T Consensus 227 ~~~ln~~~~~~~~~~~~~~~v~~IG~l~~~~~~~-------~~~~~~~wl~~~~~~~~~vvyvSfGS~~~~~~lp~~~~~ 299 (496)
T KOG1192|consen 227 FIFLNSNPLLDFEPRPLLPKVIPIGPLHVKDSKQ-------KSPLPLEWLDILDESRHSVVYISFGSMVNSADLPEEQKK 299 (496)
T ss_pred EEEEccCcccCCCCCCCCCCceEECcEEecCccc-------cccccHHHHHHHhhccCCeEEEECCcccccccCCHHHHH
Confidence 7777776655552 33477899999998763321 111466677666554 89999999998 79999999
Q ss_pred HHHHHHHhC-CCcEEEEEecCCCCCccccccccCCCCCCchhHHHHhcCCeEEEEeccHHHh-hhccccceeeeccCchh
Q 045570 291 EIAIGLERS-GYNFLWSLRVSSPKDEVSAHRYVTNNGVFPEGFLERIKGRGMIWGWVPQVEI-LAHKAIGGFVSHCGWNS 368 (468)
Q Consensus 291 ~~~~al~~~-~~~~iw~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~v~~~vpq~~i-L~~~~~~~~i~HgG~~s 368 (468)
+++.+|+.. +++|||+++.... ..+++++.++.++|+...+|+||.++ |.|+++++|||||||||
T Consensus 300 ~l~~~l~~~~~~~FiW~~~~~~~-------------~~~~~~~~~~~~~nV~~~~W~PQ~~lll~H~~v~~FvTHgG~nS 366 (496)
T KOG1192|consen 300 ELAKALESLQGVTFLWKYRPDDS-------------IYFPEGLPNRGRGNVVLSKWAPQNDLLLDHPAVGGFVTHGGWNS 366 (496)
T ss_pred HHHHHHHhCCCceEEEEecCCcc-------------hhhhhcCCCCCcCceEEecCCCcHHHhcCCCcCcEEEECCcccH
Confidence 999999999 8899999986521 11333332222457788899999998 59999999999999999
Q ss_pred HHHHHhcCCcEEeccCccccchhHHHHHhhhceEEEeeeccccCCcccChhHHHHHHHHHhcCcHHHHHHHHHHHHHHHH
Q 045570 369 ILESLWYGVPIATWPIYAEQQLNAFRMVKELGLALDLRLDYRVGSDLVMAGDIESAVRCLMDGENKIRKKVKEMAEISRK 448 (468)
Q Consensus 369 ~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~G~G~~~~~~~~~~~~~~~~~~l~~av~~vl~~~~~~~~~a~~l~~~~~~ 448 (468)
|+|++++|||||++|+++||+.||+++++++++++.... ..+.+.+..++.++++ +++|+++|+++++..++
T Consensus 367 t~E~~~~GvP~v~~Plf~DQ~~Na~~i~~~g~~~v~~~~-------~~~~~~~~~~~~~il~-~~~y~~~~~~l~~~~~~ 438 (496)
T KOG1192|consen 367 TLESIYSGVPMVCVPLFGDQPLNARLLVRHGGGGVLDKR-------DLVSEELLEAIKEILE-NEEYKEAAKRLSEILRD 438 (496)
T ss_pred HHHHHhcCCceecCCccccchhHHHHHHhCCCEEEEehh-------hcCcHHHHHHHHHHHc-ChHHHHHHHHHHHHHHc
Confidence 999999999999999999999999999999555555442 5555559999999999 89999999999998773
No 26
>cd03784 GT1_Gtf_like This family includes the Gtfs, a group of homologous glycosyltransferases involved in the final stages of the biosynthesis of antibiotics vancomycin and related chloroeremomycin. Gtfs transfer sugar moieties from an activated NDP-sugar donor to the oxidatively cross-linked heptapeptide core of vancomycin group antibiotics. The core structure is important for the bioactivity of the antibiotics.
Probab=100.00 E-value=8.7e-42 Score=339.15 Aligned_cols=378 Identities=16% Similarity=0.119 Sum_probs=235.8
Q ss_pred cEEEEEcCCCCCChHHHHHHHHHHHhCCCCeEEEEEecCCCCChhhhhhhcccCCCCCCeEEEeCCCCCCCCCCC---c-
Q 045570 4 AELIFVPSPGIGHLVSTLEFAKHLTDRDDRISVTILSMKLAVAPWVDAYTKSLTDSQPRICVIDLPPVDPPLPDV---L- 79 (468)
Q Consensus 4 ~~i~~~~~p~~GH~~P~l~La~~L~~rGH~~~Vt~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~---~- 79 (468)
+||+|+++|+.||++|+++||++|++|||+ |++++++ .++..++ ..|++|..+++........ .
T Consensus 1 mrIl~~~~p~~GHv~P~l~la~~L~~rGh~--V~~~t~~-----~~~~~v~-----~~G~~~~~~~~~~~~~~~~~~~~~ 68 (401)
T cd03784 1 MRVLITTIGSRGDVQPLVALAWALRAAGHE--VRVATPP-----EFADLVE-----AAGLEFVPVGGDPDELLASPERNA 68 (401)
T ss_pred CeEEEEeCCCcchHHHHHHHHHHHHHCCCe--EEEeeCH-----hHHHHHH-----HcCCceeeCCCCHHHHHhhhhhcc
Confidence 479999999999999999999999999999 9999997 2223333 2468888887543110000 0
Q ss_pred ------CCChHHHHHHHHHhhchhHHHHHHhhhccCCCCccEEEEcCCcchHHHHHHHcCCCeEEEeCchhHHHHHHhhh
Q 045570 80 ------KKSPEYFISLVVESHLPNVKNIVSSRSNSGSLQVTGLVLDFFCVSMVDIAKELSLPSYMFLTSNMGFLRLMLYL 153 (468)
Q Consensus 80 ------~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~D~vv~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~ 153 (468)
..........+.......+.++++.+ ...++|+||+|.+.+++..+|+++|||++.+++++....+..
T Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~pDlvi~d~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~--- 142 (401)
T cd03784 69 GLLLLGPGLLLGALRLLRREAEAMLDDLVAAA---RDWGPDLVVADPLAFAGAVAAEALGIPAVRLLLGPDTPTSAF--- 142 (401)
T ss_pred cccccchHHHHHHHHHHHHHHHHHHHHHHHHh---cccCCCEEEeCcHHHHHHHHHHHhCCCeEEeecccCCccccC---
Confidence 00111111122222222333333322 135899999999888999999999999999887654211000
Q ss_pred hcccccccccccCCCCccccCCCCCCCCCCcCCCccccCCcchHHHHHHHhhccCCcEEEEc------Ccccc--CHHHH
Q 045570 154 PTRQDRISTVFESSDDELLIPGITSPVPVCVMPSCLFNKDGGHATLVKLAQRFKDVDGIIVN------TFHEL--EPYAV 225 (468)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------s~~~l--~~~~~ 225 (468)
.|.+. .. .......+.... .........+..++..|+-.. ....+ -.+..
T Consensus 143 -------------------~~~~~-~~-~~~~~~~~~~~~-~~~~~~~~~~~~~~~~gl~~~~~~~~~~~~~~~~~~~~~ 200 (401)
T cd03784 143 -------------------PPPLG-RA-NLRLYALLEAEL-WQDLLGAWLRARRRRLGLPPLSLLDGSDVPELYGFSPAV 200 (401)
T ss_pred -------------------CCccc-hH-HHHHHHHHHHHH-HHHHHHHHHHHHHHhcCCCCCcccccCCCcEEEecCccc
Confidence 00000 00 000000000000 001111111112222221100 00000 00000
Q ss_pred HHhhcCCCC-CeEEec-cccCCCCCCCCCCChhcHhHHHHhhhcCCCCcEEEEeccCccccCH-HHHHHHHHHHHhCCCc
Q 045570 226 NAFSGDLNP-PLYTAG-PVLHLKSQPNPDLDEAQYQKIFQWLDDLAESSVVFLCFGSSGSFDV-AQVKEIAIGLERSGYN 302 (468)
Q Consensus 226 ~~~~~~~~p-~v~~vG-pl~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vv~vs~GS~~~~~~-~~~~~~~~al~~~~~~ 302 (468)
.... ..++ ...++| ++...+.. ...+.++..|++. .+++|||+|||+..... ..+..+++++...+.+
T Consensus 201 ~~~~-~~~~~~~~~~g~~~~~~~~~------~~~~~~~~~~~~~--~~~~v~v~~Gs~~~~~~~~~~~~~~~a~~~~~~~ 271 (401)
T cd03784 201 LPPP-PDWPRFDLVTGYGFRDVPYN------GPPPPELWLFLAA--GRPPVYVGFGSMVVRDPEALARLDVEAVATLGQR 271 (401)
T ss_pred CCCC-CCccccCcEeCCCCCCCCCC------CCCCHHHHHHHhC--CCCcEEEeCCCCcccCHHHHHHHHHHHHHHcCCe
Confidence 0011 1223 355665 33322221 2345677888876 35699999999986555 4567799999999999
Q ss_pred EEEEEecCCCCCccccccccCCCCCCchhHHHHhcCCeEEEEeccHHHhhhccccceeeeccCchhHHHHHhcCCcEEec
Q 045570 303 FLWSLRVSSPKDEVSAHRYVTNNGVFPEGFLERIKGRGMIWGWVPQVEILAHKAIGGFVSHCGWNSILESLWYGVPIATW 382 (468)
Q Consensus 303 ~iw~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~v~~~vpq~~iL~~~~~~~~i~HgG~~s~~eal~~GvP~v~~ 382 (468)
+||+++.... . . ...++|+++.+|+||.++|+|+++ ||||||+||++|++++|||+|++
T Consensus 272 ~i~~~g~~~~-------------~--~----~~~~~~v~~~~~~p~~~ll~~~d~--~I~hgG~~t~~eal~~GvP~v~~ 330 (401)
T cd03784 272 AILSLGWGGL-------------G--A----EDLPDNVRVVDFVPHDWLLPRCAA--VVHHGGAGTTAAALRAGVPQLVV 330 (401)
T ss_pred EEEEccCccc-------------c--c----cCCCCceEEeCCCCHHHHhhhhhe--eeecCCchhHHHHHHcCCCEEee
Confidence 9999986521 0 0 123568999999999999999999 99999999999999999999999
Q ss_pred cCccccchhHHHHHhhhceEEEeeeccccCCcccChhHHHHHHHHHhcCcHHHHHHHHHHHHHHHHhhhcCCChHHHHHH
Q 045570 383 PIYAEQQLNAFRMVKELGLALDLRLDYRVGSDLVMAGDIESAVRCLMDGENKIRKKVKEMAEISRKSLMEGGSSFNSIGQ 462 (468)
Q Consensus 383 P~~~DQ~~na~~~~~~~G~G~~~~~~~~~~~~~~~~~~l~~av~~vl~~~~~~~~~a~~l~~~~~~~~~~gg~~~~~~~~ 462 (468)
|+..||+.||+++++. |+|+.++. ..+++++|.++|+++++ + .++++++++++.+++. +|. ..+.+
T Consensus 331 P~~~dQ~~~a~~~~~~-G~g~~l~~------~~~~~~~l~~al~~~l~-~-~~~~~~~~~~~~~~~~---~g~--~~~~~ 396 (401)
T cd03784 331 PFFGDQPFWAARVAEL-GAGPALDP------RELTAERLAAALRRLLD-P-PSRRRAAALLRRIREE---DGV--PSAAD 396 (401)
T ss_pred CCCCCcHHHHHHHHHC-CCCCCCCc------ccCCHHHHHHHHHHHhC-H-HHHHHHHHHHHHHHhc---cCH--HHHHH
Confidence 9999999999999886 99998874 36899999999999998 5 4666777777777653 433 44444
Q ss_pred HHH
Q 045570 463 FIS 465 (468)
Q Consensus 463 ~~~ 465 (468)
+|+
T Consensus 397 ~ie 399 (401)
T cd03784 397 VIE 399 (401)
T ss_pred HHh
Confidence 444
No 27
>COG1819 Glycosyl transferases, related to UDP-glucuronosyltransferase [Carbohydrate transport and metabolism / Signal transduction mechanisms]
Probab=100.00 E-value=8.1e-39 Score=312.62 Aligned_cols=382 Identities=18% Similarity=0.231 Sum_probs=229.3
Q ss_pred cEEEEEcCCCCCChHHHHHHHHHHHhCCCCeEEEEEecCCCCChhhhhhhcccCCCCCCeEEEeCCCCCC-CCCC-CcCC
Q 045570 4 AELIFVPSPGIGHLVSTLEFAKHLTDRDDRISVTILSMKLAVAPWVDAYTKSLTDSQPRICVIDLPPVDP-PLPD-VLKK 81 (468)
Q Consensus 4 ~~i~~~~~p~~GH~~P~l~La~~L~~rGH~~~Vt~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~-~~~~ 81 (468)
+||+++..|+.||++|.++||++|.++||+ |++++++ .+...++.. ++.|...+.... .... ....
T Consensus 2 mkil~~~~~~~Ghv~p~~aL~~eL~~~ghe--V~~~~~~-----~~~~~ve~a-----g~~f~~~~~~~~~~~~~~~~~~ 69 (406)
T COG1819 2 MKILFVVCGAYGHVNPCLALGKELRRRGHE--VVFASTG-----KFKEFVEAA-----GLAFVAYPIRDSELATEDGKFA 69 (406)
T ss_pred ceEEEEeccccccccchHHHHHHHHhcCCe--EEEEeCH-----HHHHHHHHh-----CcceeeccccCChhhhhhhhhh
Confidence 469999999999999999999999999999 9999998 333444432 355555543211 1110 1100
Q ss_pred ChHHHHHHHHHhhchhHHHHHHhhhccCCCCccEEEEcCCcchHHHHHHHcCCCeEEEeCchhHHHHHHhhhhccccccc
Q 045570 82 SPEYFISLVVESHLPNVKNIVSSRSNSGSLQVTGLVLDFFCVSMVDIAKELSLPSYMFLTSNMGFLRLMLYLPTRQDRIS 161 (468)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~D~vv~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~ 161 (468)
....+.. ......-...+.++-+. ...+|.++.|.....+ .+++..++|++......... .+......
T Consensus 70 ~~~~~~~-~~~~~~~~~~~~~~~~~---e~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~------~~~~~~~~- 137 (406)
T COG1819 70 GVKSFRR-LLQQFKKLIRELLELLR---ELEPDLVVDDARLSLG-LAARLLGIPVVGINVAPYTP------LPAAGLPL- 137 (406)
T ss_pred ccchhHH-HhhhhhhhhHHHHHHHH---hcchhhhhcchhhhhh-hhhhhcccchhhhhhhhccC------CcccccCc-
Confidence 1111111 11112222222222222 1378888888755444 78889999977543322210 10000000
Q ss_pred ccccCCCCccccCCCCCCCCCCcCCCccccCCcchHHHHHHHhhccCCcEE--EEcC-------ccccCHHHHHHh-hc-
Q 045570 162 TVFESSDDELLIPGITSPVPVCVMPSCLFNKDGGHATLVKLAQRFKDVDGI--IVNT-------FHELEPYAVNAF-SG- 230 (468)
Q Consensus 162 ~~~~~~~~~~~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~s-------~~~l~~~~~~~~-~~- 230 (468)
..... ......+.. .++.....+.. ...........+...++ ..+. -..++..+.... ..
T Consensus 138 ~~~~~-~~~~~~~~~--~~~~~~~~~~~------~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (406)
T COG1819 138 PPVGI-AGKLPIPLY--PLPPRLVRPLI------FARSWLPKLVVRRNLGLELGLPNIRRLFASGPLLEIAYTDVLFPPG 208 (406)
T ss_pred ccccc-ccccccccc--ccChhhccccc------cchhhhhhhhhhhhccccccccchHHHhcCCCCccccccccccCCC
Confidence 00000 000001110 01000000000 01111111111111111 1110 001111100000 00
Q ss_pred CCCCC-eEEeccccCCCCCCCCCCChhcHhHHHHhhhcCCCCcEEEEeccCccccCHHHHHHHHHHHHhCCCcEEEEEec
Q 045570 231 DLNPP-LYTAGPVLHLKSQPNPDLDEAQYQKIFQWLDDLAESSVVFLCFGSSGSFDVAQVKEIAIGLERSGYNFLWSLRV 309 (468)
Q Consensus 231 ~~~p~-v~~vGpl~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vv~vs~GS~~~~~~~~~~~~~~al~~~~~~~iw~~~~ 309 (468)
...|. ..++||+..... .+...|... ++++||+||||.... .+.+..+++++..++.++|..++.
T Consensus 209 ~~~p~~~~~~~~~~~~~~-----------~~~~~~~~~--d~~~vyvslGt~~~~-~~l~~~~~~a~~~l~~~vi~~~~~ 274 (406)
T COG1819 209 DRLPFIGPYIGPLLGEAA-----------NELPYWIPA--DRPIVYVSLGTVGNA-VELLAIVLEALADLDVRVIVSLGG 274 (406)
T ss_pred CCCCCCcCcccccccccc-----------ccCcchhcC--CCCeEEEEcCCcccH-HHHHHHHHHHHhcCCcEEEEeccc
Confidence 01122 345565543332 233333222 467999999999866 788889999999999999999876
Q ss_pred CCCCCccccccccCCCCCCchhHHHHhcCCeEEEEeccHHHhhhccccceeeeccCchhHHHHHhcCCcEEeccCccccc
Q 045570 310 SSPKDEVSAHRYVTNNGVFPEGFLERIKGRGMIWGWVPQVEILAHKAIGGFVSHCGWNSILESLWYGVPIATWPIYAEQQ 389 (468)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~v~~~vpq~~iL~~~~~~~~i~HgG~~s~~eal~~GvP~v~~P~~~DQ~ 389 (468)
... . .. ..+.|+.+.+|+||.++|+++++ ||||||+|||.|||++|||+|++|...||+
T Consensus 275 ~~~-~----------~~--------~~p~n~~v~~~~p~~~~l~~ad~--vI~hGG~gtt~eaL~~gvP~vv~P~~~DQ~ 333 (406)
T COG1819 275 ARD-T----------LV--------NVPDNVIVADYVPQLELLPRADA--VIHHGGAGTTSEALYAGVPLVVIPDGADQP 333 (406)
T ss_pred ccc-c----------cc--------cCCCceEEecCCCHHHHhhhcCE--EEecCCcchHHHHHHcCCCEEEecCCcchh
Confidence 211 1 01 24568999999999999999999 999999999999999999999999999999
Q ss_pred hhHHHHHhhhceEEEeeeccccCCcccChhHHHHHHHHHhcCcHHHHHHHHHHHHHHHHhhhcCCChHHHHHHHHHh
Q 045570 390 LNAFRMVKELGLALDLRLDYRVGSDLVMAGDIESAVRCLMDGENKIRKKVKEMAEISRKSLMEGGSSFNSIGQFISL 466 (468)
Q Consensus 390 ~na~~~~~~~G~G~~~~~~~~~~~~~~~~~~l~~av~~vl~~~~~~~~~a~~l~~~~~~~~~~gg~~~~~~~~~~~~ 466 (468)
.||.|+++. |+|+.++. ..++++.|+++|+++|+ |++|+++++++++++++. +| ...+.+++++
T Consensus 334 ~nA~rve~~-G~G~~l~~------~~l~~~~l~~av~~vL~-~~~~~~~~~~~~~~~~~~---~g--~~~~a~~le~ 397 (406)
T COG1819 334 LNAERVEEL-GAGIALPF------EELTEERLRAAVNEVLA-DDSYRRAAERLAEEFKEE---DG--PAKAADLLEE 397 (406)
T ss_pred HHHHHHHHc-CCceecCc------ccCCHHHHHHHHHHHhc-CHHHHHHHHHHHHHhhhc---cc--HHHHHHHHHH
Confidence 999999887 99999985 48999999999999999 899999999999999997 55 3445555443
No 28
>PRK12446 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; Reviewed
Probab=99.94 E-value=5.1e-24 Score=205.82 Aligned_cols=323 Identities=17% Similarity=0.155 Sum_probs=197.4
Q ss_pred CCCcEEEEEcCCCCCChHHHHHHHHHHHhCCCCeEEEEEecCCCCChhhhhhhcccCCCCCCeEEEeCCCCCCCCCCCcC
Q 045570 1 MKKAELIFVPSPGIGHLVSTLEFAKHLTDRDDRISVTILSMKLAVAPWVDAYTKSLTDSQPRICVIDLPPVDPPLPDVLK 80 (468)
Q Consensus 1 m~k~~i~~~~~p~~GH~~P~l~La~~L~~rGH~~~Vt~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 80 (468)
||+ |++...++-||++|.++||++|.++||+ |.|++++. ..+.......++.+..++.......
T Consensus 1 ~~~--i~~~~GGTGGHi~Pala~a~~l~~~g~~--v~~vg~~~--------~~e~~l~~~~g~~~~~~~~~~l~~~---- 64 (352)
T PRK12446 1 MKK--IVFTGGGSAGHVTPNLAIIPYLKEDNWD--ISYIGSHQ--------GIEKTIIEKENIPYYSISSGKLRRY---- 64 (352)
T ss_pred CCe--EEEEcCCcHHHHHHHHHHHHHHHhCCCE--EEEEECCC--------ccccccCcccCCcEEEEeccCcCCC----
Confidence 765 9999999999999999999999999988 99999762 2222111123577766653221111
Q ss_pred CChHHHHHHHHHhhch--hHHHHHHhhhccCCCCccEEEEcCC--cchHHHHHHHcCCCeEEEeCchhHHHHHHhhhhcc
Q 045570 81 KSPEYFISLVVESHLP--NVKNIVSSRSNSGSLQVTGLVLDFF--CVSMVDIAKELSLPSYMFLTSNMGFLRLMLYLPTR 156 (468)
Q Consensus 81 ~~~~~~~~~~~~~~~~--~~~~~l~~~~~~~~~~~D~vv~D~~--~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~ 156 (468)
.....+......... ....++++. +||+|++.-- +..+..+|..+++|++..-..
T Consensus 65 -~~~~~~~~~~~~~~~~~~~~~i~~~~------kPdvvi~~Ggy~s~p~~~aa~~~~~p~~i~e~n-------------- 123 (352)
T PRK12446 65 -FDLKNIKDPFLVMKGVMDAYVRIRKL------KPDVIFSKGGFVSVPVVIGGWLNRVPVLLHESD-------------- 123 (352)
T ss_pred -chHHHHHHHHHHHHHHHHHHHHHHhc------CCCEEEecCchhhHHHHHHHHHcCCCEEEECCC--------------
Confidence 111112222221111 222334444 9999997543 334678899999998763321
Q ss_pred cccccccccCCCCccccCCCCCCCCCCcCCCccccCCcchHHHHHHHhhccCCcEEEEcCccccCHHHHHHhhcCCCCCe
Q 045570 157 QDRISTVFESSDDELLIPGITSPVPVCVMPSCLFNKDGGHATLVKLAQRFKDVDGIIVNTFHELEPYAVNAFSGDLNPPL 236 (468)
Q Consensus 157 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~~~~~~~~~p~v 236 (468)
..|++.+ +.+. +..+.+. .+|.+.. ..+. ..++
T Consensus 124 ---------------~~~g~~n------------------r~~~------~~a~~v~-~~f~~~~----~~~~---~~k~ 156 (352)
T PRK12446 124 ---------------MTPGLAN------------------KIAL------RFASKIF-VTFEEAA----KHLP---KEKV 156 (352)
T ss_pred ---------------CCccHHH------------------HHHH------HhhCEEE-EEccchh----hhCC---CCCe
Confidence 1122211 0111 1112222 2332211 1111 1247
Q ss_pred EEeccccCCCCCCCCCCChhcHhHHHHhhhcCCCCcEEEEeccCccccCHHH-HHHHHHHHHhCCCcEEEEEecCCCCCc
Q 045570 237 YTAGPVLHLKSQPNPDLDEAQYQKIFQWLDDLAESSVVFLCFGSSGSFDVAQ-VKEIAIGLERSGYNFLWSLRVSSPKDE 315 (468)
Q Consensus 237 ~~vGpl~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vv~vs~GS~~~~~~~~-~~~~~~al~~~~~~~iw~~~~~~~~~~ 315 (468)
.++|+.+...... .......+.+.-.+++++|+|..||......++ +.+++..+.. +..++|++|.+.
T Consensus 157 ~~tG~Pvr~~~~~------~~~~~~~~~~~l~~~~~~iLv~GGS~Ga~~in~~~~~~l~~l~~-~~~vv~~~G~~~---- 225 (352)
T PRK12446 157 IYTGSPVREEVLK------GNREKGLAFLGFSRKKPVITIMGGSLGAKKINETVREALPELLL-KYQIVHLCGKGN---- 225 (352)
T ss_pred EEECCcCCccccc------ccchHHHHhcCCCCCCcEEEEECCccchHHHHHHHHHHHHhhcc-CcEEEEEeCCch----
Confidence 8899655432210 011122222222234679999999998655543 4555555532 488999988641
Q ss_pred cccccccCCCCCCchhHHHHhcCCeEEEEec-c-HHHhhhccccceeeeccCchhHHHHHhcCCcEEeccCc-----ccc
Q 045570 316 VSAHRYVTNNGVFPEGFLERIKGRGMIWGWV-P-QVEILAHKAIGGFVSHCGWNSILESLWYGVPIATWPIY-----AEQ 388 (468)
Q Consensus 316 ~~~~~~~~~~~~lp~~~~~~~~~~~~v~~~v-p-q~~iL~~~~~~~~i~HgG~~s~~eal~~GvP~v~~P~~-----~DQ 388 (468)
+.+... . ..+..+.+|+ + -.+++.++|+ +|||||.+|+.|++++|+|+|++|+. .||
T Consensus 226 ------------~~~~~~-~-~~~~~~~~f~~~~m~~~~~~adl--vIsr~G~~t~~E~~~~g~P~I~iP~~~~~~~~~Q 289 (352)
T PRK12446 226 ------------LDDSLQ-N-KEGYRQFEYVHGELPDILAITDF--VISRAGSNAIFEFLTLQKPMLLIPLSKFASRGDQ 289 (352)
T ss_pred ------------HHHHHh-h-cCCcEEecchhhhHHHHHHhCCE--EEECCChhHHHHHHHcCCCEEEEcCCCCCCCchH
Confidence 111000 1 1244556777 4 4468999999 99999999999999999999999985 589
Q ss_pred chhHHHHHhhhceEEEeeeccccCCcccChhHHHHHHHHHhcCcHHHHHHHHH
Q 045570 389 QLNAFRMVKELGLALDLRLDYRVGSDLVMAGDIESAVRCLMDGENKIRKKVKE 441 (468)
Q Consensus 389 ~~na~~~~~~~G~G~~~~~~~~~~~~~~~~~~l~~av~~vl~~~~~~~~~a~~ 441 (468)
..||..+++. |+|..+. ...++++.|.+++.+++++.+.|++++++
T Consensus 290 ~~Na~~l~~~-g~~~~l~------~~~~~~~~l~~~l~~ll~~~~~~~~~~~~ 335 (352)
T PRK12446 290 ILNAESFERQ-GYASVLY------EEDVTVNSLIKHVEELSHNNEKYKTALKK 335 (352)
T ss_pred HHHHHHHHHC-CCEEEcc------hhcCCHHHHHHHHHHHHcCHHHHHHHHHH
Confidence 9999999997 9999887 34889999999999999832366554444
No 29
>COG0707 MurG UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase [Cell envelope biogenesis, outer membrane]
Probab=99.88 E-value=4.1e-20 Score=176.50 Aligned_cols=307 Identities=17% Similarity=0.184 Sum_probs=195.5
Q ss_pred EEEEEcCCCCCChHHHHHHHHHHHhCCCCeEEEEEecCCCCChhhhhhhcccCCCCCCeEEEeCCCCCCCCCCCcCCChH
Q 045570 5 ELIFVPSPGIGHLVSTLEFAKHLTDRDDRISVTILSMKLAVAPWVDAYTKSLTDSQPRICVIDLPPVDPPLPDVLKKSPE 84 (468)
Q Consensus 5 ~i~~~~~p~~GH~~P~l~La~~L~~rGH~~~Vt~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 84 (468)
+|++...++-||+.|.++|+++|.++|++ +|.++.+. ...+.......++.++.++......... ..
T Consensus 2 ~ivl~~gGTGGHv~pAlAl~~~l~~~g~~-~v~~~~~~--------~~~e~~l~~~~~~~~~~I~~~~~~~~~~----~~ 68 (357)
T COG0707 2 KIVLTAGGTGGHVFPALALAEELAKRGWE-QVIVLGTG--------DGLEAFLVKQYGIEFELIPSGGLRRKGS----LK 68 (357)
T ss_pred eEEEEeCCCccchhHHHHHHHHHHhhCcc-EEEEeccc--------ccceeeeccccCceEEEEecccccccCc----HH
Confidence 58999999999999999999999999985 58888665 2233322223467887777554333211 11
Q ss_pred HHHHHHHH--hhchhHHHHHHhhhccCCCCccEEEE--cCCcchHHHHHHHcCCCeEEEeCchhHHHHHHhhhhcccccc
Q 045570 85 YFISLVVE--SHLPNVKNIVSSRSNSGSLQVTGLVL--DFFCVSMVDIAKELSLPSYMFLTSNMGFLRLMLYLPTRQDRI 160 (468)
Q Consensus 85 ~~~~~~~~--~~~~~~~~~l~~~~~~~~~~~D~vv~--D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~ 160 (468)
.+...+. ...-.....+++. +||+|+. .+.+..+..+|..+|||++..-
T Consensus 69 -~~~~~~~~~~~~~~a~~il~~~------kPd~vig~Ggyvs~P~~~Aa~~~~iPv~ihE-------------------- 121 (357)
T COG0707 69 -LLKAPFKLLKGVLQARKILKKL------KPDVVIGTGGYVSGPVGIAAKLLGIPVIIHE-------------------- 121 (357)
T ss_pred -HHHHHHHHHHHHHHHHHHHHHc------CCCEEEecCCccccHHHHHHHhCCCCEEEEe--------------------
Confidence 1111111 1222445566665 9999997 4555677888999999987522
Q ss_pred cccccCCCCccccCCCCCCCCCCcCCCccccCCcchHHHHHHHhhccCCcEEEEcCccccCHHHHHHhhcCCCC--CeEE
Q 045570 161 STVFESSDDELLIPGITSPVPVCVMPSCLFNKDGGHATLVKLAQRFKDVDGIIVNTFHELEPYAVNAFSGDLNP--PLYT 238 (468)
Q Consensus 161 ~~~~~~~~~~~~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~~~~~~~~~p--~v~~ 238 (468)
....||+.+.+. . +.++.+. .+|.+.+ ...+ +++.
T Consensus 122 ---------qn~~~G~ank~~------------------~------~~a~~V~-~~f~~~~---------~~~~~~~~~~ 158 (357)
T COG0707 122 ---------QNAVPGLANKIL------------------S------KFAKKVA-SAFPKLE---------AGVKPENVVV 158 (357)
T ss_pred ---------cCCCcchhHHHh------------------H------Hhhceee-ecccccc---------ccCCCCceEE
Confidence 223344422110 0 1111111 1222211 1122 3777
Q ss_pred ec-cccCCCCCCCCCCChhcHhHHHHhhhcCCCCcEEEEeccCccccCHHH-HHHHHHHHHhCCCcEEEEEecCCCCCcc
Q 045570 239 AG-PVLHLKSQPNPDLDEAQYQKIFQWLDDLAESSVVFLCFGSSGSFDVAQ-VKEIAIGLERSGYNFLWSLRVSSPKDEV 316 (468)
Q Consensus 239 vG-pl~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vv~vs~GS~~~~~~~~-~~~~~~al~~~~~~~iw~~~~~~~~~~~ 316 (468)
+| |+...-. . .+..-..+. ...++++|.|.-||+....-++ +.+++..+.+ +..+++..|.+.
T Consensus 159 tG~Pvr~~~~-------~-~~~~~~~~~-~~~~~~~ilV~GGS~Ga~~ln~~v~~~~~~l~~-~~~v~~~~G~~~----- 223 (357)
T COG0707 159 TGIPVRPEFE-------E-LPAAEVRKD-GRLDKKTILVTGGSQGAKALNDLVPEALAKLAN-RIQVIHQTGKND----- 223 (357)
T ss_pred ecCcccHHhh-------c-cchhhhhhh-ccCCCcEEEEECCcchhHHHHHHHHHHHHHhhh-CeEEEEEcCcch-----
Confidence 88 5432211 0 111111111 1114569999999987655443 4445555554 678888887651
Q ss_pred ccccccCCCCCCchhHHHHhc-CC-eEEEEeccHHH-hhhccccceeeeccCchhHHHHHhcCCcEEeccCc----cccc
Q 045570 317 SAHRYVTNNGVFPEGFLERIK-GR-GMIWGWVPQVE-ILAHKAIGGFVSHCGWNSILESLWYGVPIATWPIY----AEQQ 389 (468)
Q Consensus 317 ~~~~~~~~~~~lp~~~~~~~~-~~-~~v~~~vpq~~-iL~~~~~~~~i~HgG~~s~~eal~~GvP~v~~P~~----~DQ~ 389 (468)
+ +....... .+ ..+.+|..+.. +++.+|+ +||++|.+|+.|.+++|+|+|.+|+. .||.
T Consensus 224 -----------~-~~~~~~~~~~~~~~v~~f~~dm~~~~~~ADL--vIsRaGa~Ti~E~~a~g~P~IliP~p~~~~~~Q~ 289 (357)
T COG0707 224 -----------L-EELKSAYNELGVVRVLPFIDDMAALLAAADL--VISRAGALTIAELLALGVPAILVPYPPGADGHQE 289 (357)
T ss_pred -----------H-HHHHHHHhhcCcEEEeeHHhhHHHHHHhccE--EEeCCcccHHHHHHHhCCCEEEeCCCCCccchHH
Confidence 1 11111111 22 66678887655 8899999 99999999999999999999999974 4899
Q ss_pred hhHHHHHhhhceEEEeeeccccCCcccChhHHHHHHHHHhc
Q 045570 390 LNAFRMVKELGLALDLRLDYRVGSDLVMAGDIESAVRCLMD 430 (468)
Q Consensus 390 ~na~~~~~~~G~G~~~~~~~~~~~~~~~~~~l~~av~~vl~ 430 (468)
.||+.++++ |.|..++- ..+|.+++.+.|.+++.
T Consensus 290 ~NA~~l~~~-gaa~~i~~------~~lt~~~l~~~i~~l~~ 323 (357)
T COG0707 290 YNAKFLEKA-GAALVIRQ------SELTPEKLAELILRLLS 323 (357)
T ss_pred HHHHHHHhC-CCEEEecc------ccCCHHHHHHHHHHHhc
Confidence 999999998 99999883 47999999999999998
No 30
>PF13528 Glyco_trans_1_3: Glycosyl transferase family 1
Probab=99.87 E-value=5e-20 Score=177.23 Aligned_cols=305 Identities=18% Similarity=0.241 Sum_probs=179.0
Q ss_pred EEEEEcCC-CCCChHHHHHHHHHHHhCCCCeEEEEEecCCCCChhhhhhhcccCCCCCCeEEEeCCCCCCCCCCCcCCCh
Q 045570 5 ELIFVPSP-GIGHLVSTLEFAKHLTDRDDRISVTILSMKLAVAPWVDAYTKSLTDSQPRICVIDLPPVDPPLPDVLKKSP 83 (468)
Q Consensus 5 ~i~~~~~p-~~GH~~P~l~La~~L~~rGH~~~Vt~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 83 (468)
||++...+ +.||+.-.++||++| |||+ |++++..... .+++ +.+....++....... ....+.
T Consensus 2 kIl~~v~~~G~GH~~R~~~la~~L--rg~~--v~~~~~~~~~-----~~~~------~~~~~~~~~~~~~~~~-~~~~~~ 65 (318)
T PF13528_consen 2 KILFYVQGHGLGHASRCLALARAL--RGHE--VTFITSGPAP-----EFLK------PRFPVREIPGLGPIQE-NGRLDR 65 (318)
T ss_pred EEEEEeCCCCcCHHHHHHHHHHHH--ccCc--eEEEEcCCcH-----HHhc------cccCEEEccCceEecc-CCccch
Confidence 58887777 999999999999999 5999 9999876221 2221 1133444432221111 101121
Q ss_pred HHHHHHHH---HhhchhHHHHHHhhhccCCCCccEEEEcCCcchHHHHHHHcCCCeEEEeCchhHHHHHHhhhhcccccc
Q 045570 84 EYFISLVV---ESHLPNVKNIVSSRSNSGSLQVTGLVLDFFCVSMVDIAKELSLPSYMFLTSNMGFLRLMLYLPTRQDRI 160 (468)
Q Consensus 84 ~~~~~~~~---~~~~~~~~~~l~~~~~~~~~~~D~vv~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~ 160 (468)
...+.... ......+++.++.+ + ..+||+||+|. .+.+..+|+..|+|++.+.......
T Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~~~l-~--~~~pDlVIsD~-~~~~~~aa~~~giP~i~i~~~~~~~-------------- 127 (318)
T PF13528_consen 66 WKTVRNNIRWLARLARRIRREIRWL-R--EFRPDLVISDF-YPLAALAARRAGIPVIVISNQYWFL-------------- 127 (318)
T ss_pred HHHHHHHHHhhHHHHHHHHHHHHHH-H--hcCCCEEEEcC-hHHHHHHHHhcCCCEEEEEehHHcc--------------
Confidence 11111111 11122333332222 1 24899999996 4556788999999988766443210
Q ss_pred cccccCCCCccccCCCCCCCCCCcCCCccccCCcchHHHHHHHhh--ccCCcEEEEcCccccCHHHHHHhhcCCCCCeEE
Q 045570 161 STVFESSDDELLIPGITSPVPVCVMPSCLFNKDGGHATLVKLAQR--FKDVDGIIVNTFHELEPYAVNAFSGDLNPPLYT 238 (468)
Q Consensus 161 ~~~~~~~~~~~~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~s~~~l~~~~~~~~~~~~~p~v~~ 238 (468)
.+.. .+... .. ....+.+.... .......+.-++. ... ....+...
T Consensus 128 ------------~~~~--~~~~~--------~~-~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~--------~~~~~~~~ 175 (318)
T PF13528_consen 128 ------------HPNF--WLPWD--------QD-FGRLIERYIDRYHFPPADRRLALSFY-PPL--------PPFFRVPF 175 (318)
T ss_pred ------------cccC--Ccchh--------hh-HHHHHHHhhhhccCCcccceecCCcc-ccc--------cccccccc
Confidence 0000 00000 00 01111111111 1222222222322 100 01122556
Q ss_pred eccccCCCCCCCCCCChhcHhHHHHhhhcCCCCcEEEEeccCccccCHHHHHHHHHHHHhCC-CcEEEEEecCCCCCccc
Q 045570 239 AGPVLHLKSQPNPDLDEAQYQKIFQWLDDLAESSVVFLCFGSSGSFDVAQVKEIAIGLERSG-YNFLWSLRVSSPKDEVS 317 (468)
Q Consensus 239 vGpl~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vv~vs~GS~~~~~~~~~~~~~~al~~~~-~~~iw~~~~~~~~~~~~ 317 (468)
+||+....... .. ..+++.|+|+||..... .++++++..+ ..+++. +....
T Consensus 176 ~~p~~~~~~~~-------~~---------~~~~~~iLv~~gg~~~~------~~~~~l~~~~~~~~~v~-g~~~~----- 227 (318)
T PF13528_consen 176 VGPIIRPEIRE-------LP---------PEDEPKILVYFGGGGPG------DLIEALKALPDYQFIVF-GPNAA----- 227 (318)
T ss_pred cCchhcccccc-------cC---------CCCCCEEEEEeCCCcHH------HHHHHHHhCCCCeEEEE-cCCcc-----
Confidence 78776543211 00 11345899999986433 5666676665 566655 54310
Q ss_pred cccccCCCCCCchhHHHHhcCCeEEEEec--cHHHhhhccccceeeeccCchhHHHHHhcCCcEEeccC--ccccchhHH
Q 045570 318 AHRYVTNNGVFPEGFLERIKGRGMIWGWV--PQVEILAHKAIGGFVSHCGWNSILESLWYGVPIATWPI--YAEQQLNAF 393 (468)
Q Consensus 318 ~~~~~~~~~~lp~~~~~~~~~~~~v~~~v--pq~~iL~~~~~~~~i~HgG~~s~~eal~~GvP~v~~P~--~~DQ~~na~ 393 (468)
+...+|+.+.+|. ...+++..+++ +|+|||+||+.|++++|+|++++|. ..+|..||+
T Consensus 228 ----------------~~~~~ni~~~~~~~~~~~~~m~~ad~--vIs~~G~~t~~Ea~~~g~P~l~ip~~~~~EQ~~~a~ 289 (318)
T PF13528_consen 228 ----------------DPRPGNIHVRPFSTPDFAELMAAADL--VISKGGYTTISEALALGKPALVIPRPGQDEQEYNAR 289 (318)
T ss_pred ----------------cccCCCEEEeecChHHHHHHHHhCCE--EEECCCHHHHHHHHHcCCCEEEEeCCCCchHHHHHH
Confidence 0124688888876 45668999999 9999999999999999999999999 789999999
Q ss_pred HHHhhhceEEEeeeccccCCcccChhHHHHHHHHH
Q 045570 394 RMVKELGLALDLRLDYRVGSDLVMAGDIESAVRCL 428 (468)
Q Consensus 394 ~~~~~~G~G~~~~~~~~~~~~~~~~~~l~~av~~v 428 (468)
++.+. |+|+.+.. .+++++.|+++|+++
T Consensus 290 ~l~~~-G~~~~~~~------~~~~~~~l~~~l~~~ 317 (318)
T PF13528_consen 290 KLEEL-GLGIVLSQ------EDLTPERLAEFLERL 317 (318)
T ss_pred HHHHC-CCeEEccc------ccCCHHHHHHHHhcC
Confidence 98886 99999873 499999999999764
No 31
>TIGR00661 MJ1255 conserved hypothetical protein. This model represents nearly the full length of MJ1255 from Methanococcus jannaschii and of an unpublished protein from Vibrio cholerae, as well as the C-terminal half of a protein from Methanobacterium thermoautotrophicum. A small region (~50 amino acids) within the domain appears related to a family of sugar transferases.
Probab=99.84 E-value=6e-19 Score=169.39 Aligned_cols=87 Identities=20% Similarity=0.283 Sum_probs=71.1
Q ss_pred cCCeEEEEecc--HHHhhhccccceeeeccCchhHHHHHhcCCcEEeccCcc--ccchhHHHHHhhhceEEEeeeccccC
Q 045570 337 KGRGMIWGWVP--QVEILAHKAIGGFVSHCGWNSILESLWYGVPIATWPIYA--EQQLNAFRMVKELGLALDLRLDYRVG 412 (468)
Q Consensus 337 ~~~~~v~~~vp--q~~iL~~~~~~~~i~HgG~~s~~eal~~GvP~v~~P~~~--DQ~~na~~~~~~~G~G~~~~~~~~~~ 412 (468)
++|+.+.+|.| ..+.|+.+++ +|||||++|+.|++++|+|++++|..+ ||..||+.+++. |+|+.++..
T Consensus 228 ~~~v~~~~~~~~~~~~~l~~ad~--vI~~~G~~t~~Ea~~~g~P~l~ip~~~~~eQ~~na~~l~~~-g~~~~l~~~---- 300 (321)
T TIGR00661 228 NENVEIRRITTDNFKELIKNAEL--VITHGGFSLISEALSLGKPLIVIPDLGQFEQGNNAVKLEDL-GCGIALEYK---- 300 (321)
T ss_pred CCCEEEEECChHHHHHHHHhCCE--EEECCChHHHHHHHHcCCCEEEEcCCCcccHHHHHHHHHHC-CCEEEcChh----
Confidence 35888889997 4557788888 999999999999999999999999965 899999999987 999988732
Q ss_pred CcccChhHHHHHHHHHhcCcHHHH
Q 045570 413 SDLVMAGDIESAVRCLMDGENKIR 436 (468)
Q Consensus 413 ~~~~~~~~l~~av~~vl~~~~~~~ 436 (468)
.+ ++.+++.++++ |+.|.
T Consensus 301 --~~---~~~~~~~~~~~-~~~~~ 318 (321)
T TIGR00661 301 --EL---RLLEAILDIRN-MKRYK 318 (321)
T ss_pred --hH---HHHHHHHhccc-ccccc
Confidence 33 66667767776 55553
No 32
>PRK00726 murG undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase; Provisional
Probab=99.76 E-value=5.7e-16 Score=151.52 Aligned_cols=339 Identities=13% Similarity=0.090 Sum_probs=188.9
Q ss_pred cEEEEEcCCCCCChHHHHHHHHHHHhCCCCeEEEEEecCCCCChhhhhhhcccCCCCCCeEEEeCCCCCCCCCCCcCCCh
Q 045570 4 AELIFVPSPGIGHLVSTLEFAKHLTDRDDRISVTILSMKLAVAPWVDAYTKSLTDSQPRICVIDLPPVDPPLPDVLKKSP 83 (468)
Q Consensus 4 ~~i~~~~~p~~GH~~P~l~La~~L~~rGH~~~Vt~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 83 (468)
+||+|+..+..||....+.|++.|.++||+ |++++.+.... .+. ....+++++.++.....+. ..
T Consensus 2 ~~i~i~~~g~gG~~~~~~~la~~L~~~g~e--v~vv~~~~~~~------~~~--~~~~g~~~~~~~~~~~~~~-----~~ 66 (357)
T PRK00726 2 KKILLAGGGTGGHVFPALALAEELKKRGWE--VLYLGTARGME------ARL--VPKAGIEFHFIPSGGLRRK-----GS 66 (357)
T ss_pred cEEEEEcCcchHhhhHHHHHHHHHHhCCCE--EEEEECCCchh------hhc--cccCCCcEEEEeccCcCCC-----Ch
Confidence 459999999999999999999999999999 88888752110 011 0112556655543211111 11
Q ss_pred HHHHHHHHH--hhchhHHHHHHhhhccCCCCccEEEEcCC--cchHHHHHHHcCCCeEEEeCchhHHHHHHhhhhccccc
Q 045570 84 EYFISLVVE--SHLPNVKNIVSSRSNSGSLQVTGLVLDFF--CVSMVDIAKELSLPSYMFLTSNMGFLRLMLYLPTRQDR 159 (468)
Q Consensus 84 ~~~~~~~~~--~~~~~~~~~l~~~~~~~~~~~D~vv~D~~--~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~ 159 (468)
...+..... .....+.+.+++ .+||+|++... ...+..++...++|++.... ..
T Consensus 67 ~~~l~~~~~~~~~~~~~~~~ik~------~~pDvv~~~~~~~~~~~~~~~~~~~~p~v~~~~-~~--------------- 124 (357)
T PRK00726 67 LANLKAPFKLLKGVLQARKILKR------FKPDVVVGFGGYVSGPGGLAARLLGIPLVIHEQ-NA--------------- 124 (357)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHh------cCCCEEEECCCcchhHHHHHHHHcCCCEEEEcC-CC---------------
Confidence 111111111 111123333433 38999998863 23345667778999774210 00
Q ss_pred ccccccCCCCccccCCCCCCCCCCcCCCccccCCcchHHHHHHHhhccCCcEEEEcCccccCHHHHHHhhcCCCCCeEEe
Q 045570 160 ISTVFESSDDELLIPGITSPVPVCVMPSCLFNKDGGHATLVKLAQRFKDVDGIIVNTFHELEPYAVNAFSGDLNPPLYTA 239 (468)
Q Consensus 160 ~~~~~~~~~~~~~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~~~~~~~~~p~v~~v 239 (468)
.++ ....+. .+..+.++..+-..+ . .....++..+
T Consensus 125 -------------~~~-------------------~~~r~~-----~~~~d~ii~~~~~~~-----~---~~~~~~i~vi 159 (357)
T PRK00726 125 -------------VPG-------------------LANKLL-----ARFAKKVATAFPGAF-----P---EFFKPKAVVT 159 (357)
T ss_pred -------------Ccc-------------------HHHHHH-----HHHhchheECchhhh-----h---ccCCCCEEEE
Confidence 000 000000 011222222111110 0 0122347888
Q ss_pred ccccCCCCCCCCCCChhcHhHHHHhhhcCCCCcEEEEeccCccccCHHHHHH-HHHHHHhCCC--cEEEEEecCCCCCcc
Q 045570 240 GPVLHLKSQPNPDLDEAQYQKIFQWLDDLAESSVVFLCFGSSGSFDVAQVKE-IAIGLERSGY--NFLWSLRVSSPKDEV 316 (468)
Q Consensus 240 Gpl~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vv~vs~GS~~~~~~~~~~~-~~~al~~~~~--~~iw~~~~~~~~~~~ 316 (468)
|+.+...... ....-.. +...+...+|++..|+.. ...... +.+++..... .++|.+|.+.
T Consensus 160 ~n~v~~~~~~-------~~~~~~~-~~~~~~~~~i~~~gg~~~---~~~~~~~l~~a~~~~~~~~~~~~~~G~g~----- 223 (357)
T PRK00726 160 GNPVREEILA-------LAAPPAR-LAGREGKPTLLVVGGSQG---ARVLNEAVPEALALLPEALQVIHQTGKGD----- 223 (357)
T ss_pred CCCCChHhhc-------ccchhhh-ccCCCCCeEEEEECCcHh---HHHHHHHHHHHHHHhhhCcEEEEEcCCCc-----
Confidence 8655432110 0000011 111123346666555532 222222 2355544322 4556666541
Q ss_pred ccccccCCCCCCchhHHHH--hcCCeEEEEecc-HHHhhhccccceeeeccCchhHHHHHhcCCcEEeccC----ccccc
Q 045570 317 SAHRYVTNNGVFPEGFLER--IKGRGMIWGWVP-QVEILAHKAIGGFVSHCGWNSILESLWYGVPIATWPI----YAEQQ 389 (468)
Q Consensus 317 ~~~~~~~~~~~lp~~~~~~--~~~~~~v~~~vp-q~~iL~~~~~~~~i~HgG~~s~~eal~~GvP~v~~P~----~~DQ~ 389 (468)
. +.+.+. ..-++.+.+|+. ..++++.+++ +|+|+|.++++|++++|+|+|++|. .+||.
T Consensus 224 -----------~-~~~~~~~~~~~~v~~~g~~~~~~~~~~~~d~--~i~~~g~~~~~Ea~~~g~Pvv~~~~~~~~~~~~~ 289 (357)
T PRK00726 224 -----------L-EEVRAAYAAGINAEVVPFIDDMAAAYAAADL--VICRAGASTVAELAAAGLPAILVPLPHAADDHQT 289 (357)
T ss_pred -----------H-HHHHHHhhcCCcEEEeehHhhHHHHHHhCCE--EEECCCHHHHHHHHHhCCCEEEecCCCCCcCcHH
Confidence 0 111111 112367779984 5679999999 9999999999999999999999997 46899
Q ss_pred hhHHHHHhhhceEEEeeeccccCCcccChhHHHHHHHHHhcCcHHHHHHHHHHHHHHHHhhhcCCChHHHHHHHHHh
Q 045570 390 LNAFRMVKELGLALDLRLDYRVGSDLVMAGDIESAVRCLMDGENKIRKKVKEMAEISRKSLMEGGSSFNSIGQFISL 466 (468)
Q Consensus 390 ~na~~~~~~~G~G~~~~~~~~~~~~~~~~~~l~~av~~vl~~~~~~~~~a~~l~~~~~~~~~~gg~~~~~~~~~~~~ 466 (468)
.|+..+.+. |.|+.+.. ..++++.+.+++.++++ |++++++..+-++... +.++..+-++.+.+.
T Consensus 290 ~~~~~i~~~-~~g~~~~~------~~~~~~~l~~~i~~ll~-~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~ 354 (357)
T PRK00726 290 ANARALVDA-GAALLIPQ------SDLTPEKLAEKLLELLS-DPERLEAMAEAARALG----KPDAAERLADLIEEL 354 (357)
T ss_pred HHHHHHHHC-CCEEEEEc------ccCCHHHHHHHHHHHHc-CHHHHHHHHHHHHhcC----CcCHHHHHHHHHHHH
Confidence 999999887 99998873 36789999999999999 7877766555443332 344444555554443
No 33
>cd03785 GT1_MurG MurG is an N-acetylglucosaminyltransferase, the last enzyme involved in the intracellular phase of peptidoglycan biosynthesis. It transfers N-acetyl-D-glucosamine (GlcNAc) from UDP-GlcNAc to the C4 hydroxyl of a lipid-linked N-acetylmuramoyl pentapeptide (NAM). The resulting disaccharide is then transported across the cell membrane, where it is polymerized into NAG-NAM cell-wall repeat structure. MurG belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains, each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=99.73 E-value=2.8e-15 Score=146.29 Aligned_cols=322 Identities=16% Similarity=0.147 Sum_probs=183.7
Q ss_pred EEEEEcCCCCCChHHHHHHHHHHHhCCCCeEEEEEecCCCCChhhhhhhcccCCCCCCeEEEeCCCCCCCCCCCcCCChH
Q 045570 5 ELIFVPSPGIGHLVSTLEFAKHLTDRDDRISVTILSMKLAVAPWVDAYTKSLTDSQPRICVIDLPPVDPPLPDVLKKSPE 84 (468)
Q Consensus 5 ~i~~~~~p~~GH~~P~l~La~~L~~rGH~~~Vt~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 84 (468)
||++...++.||+...+.|++.|.++||+ |++++...... .+. ....++++..++.....+. ...
T Consensus 1 ~~~~~~~~~gG~~~~~~~la~~l~~~G~e--v~v~~~~~~~~------~~~--~~~~~~~~~~~~~~~~~~~-----~~~ 65 (350)
T cd03785 1 RILIAGGGTGGHIFPALALAEELRERGAE--VLFLGTKRGLE------ARL--VPKAGIPLHTIPVGGLRRK-----GSL 65 (350)
T ss_pred CEEEEecCchhhhhHHHHHHHHHHhCCCE--EEEEECCCcch------hhc--ccccCCceEEEEecCcCCC-----ChH
Confidence 58999999999999999999999999999 88888652110 110 0112466666554321111 111
Q ss_pred HHHHHHHH--hhchhHHHHHHhhhccCCCCccEEEEcCC--cchHHHHHHHcCCCeEEEeCchhHHHHHHhhhhcccccc
Q 045570 85 YFISLVVE--SHLPNVKNIVSSRSNSGSLQVTGLVLDFF--CVSMVDIAKELSLPSYMFLTSNMGFLRLMLYLPTRQDRI 160 (468)
Q Consensus 85 ~~~~~~~~--~~~~~~~~~l~~~~~~~~~~~D~vv~D~~--~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~ 160 (468)
..+..... .....+...+++ .+||+|++... ...+..+|...++|++... ...
T Consensus 66 ~~~~~~~~~~~~~~~~~~~i~~------~~pDvI~~~~~~~~~~~~~~a~~~~~p~v~~~-~~~---------------- 122 (350)
T cd03785 66 KKLKAPFKLLKGVLQARKILKK------FKPDVVVGFGGYVSGPVGLAAKLLGIPLVIHE-QNA---------------- 122 (350)
T ss_pred HHHHHHHHHHHHHHHHHHHHHh------cCCCEEEECCCCcchHHHHHHHHhCCCEEEEc-CCC----------------
Confidence 11111111 111123333443 38999998642 3345667888899977421 000
Q ss_pred cccccCCCCccccCCCCCCCCCCcCCCccccCCcchHHHHHHHhhccCCcEEEEcCccccCHHHHHHhhcCCCCCeEEec
Q 045570 161 STVFESSDDELLIPGITSPVPVCVMPSCLFNKDGGHATLVKLAQRFKDVDGIIVNTFHELEPYAVNAFSGDLNPPLYTAG 240 (468)
Q Consensus 161 ~~~~~~~~~~~~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~~~~~~~~~p~v~~vG 240 (468)
.++ ....+ ..+..+.++..+-...+. + ...++..+|
T Consensus 123 ------------~~~-------------------~~~~~-----~~~~~~~vi~~s~~~~~~-----~---~~~~~~~i~ 158 (350)
T cd03785 123 ------------VPG-------------------LANRL-----LARFADRVALSFPETAKY-----F---PKDKAVVTG 158 (350)
T ss_pred ------------Ccc-------------------HHHHH-----HHHhhCEEEEcchhhhhc-----C---CCCcEEEEC
Confidence 000 00000 012234444433221111 0 112467777
Q ss_pred cccCCCCCCCCCCChhcHhHHHHhhhcCCCCcEEEEeccCccccCH-HHHHHHHHHHHhCCCcEEEEEecCCCCCccccc
Q 045570 241 PVLHLKSQPNPDLDEAQYQKIFQWLDDLAESSVVFLCFGSSGSFDV-AQVKEIAIGLERSGYNFLWSLRVSSPKDEVSAH 319 (468)
Q Consensus 241 pl~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vv~vs~GS~~~~~~-~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~~~ 319 (468)
+.+..... ..... ...+...+++.+|.+..|+...... +.+.+++..+.+.+..+++..|.+.
T Consensus 159 n~v~~~~~-------~~~~~-~~~~~~~~~~~~i~~~~g~~~~~~~~~~l~~a~~~l~~~~~~~~~i~G~g~-------- 222 (350)
T cd03785 159 NPVREEIL-------ALDRE-RARLGLRPGKPTLLVFGGSQGARAINEAVPEALAELLRKRLQVIHQTGKGD-------- 222 (350)
T ss_pred CCCchHHh-------hhhhh-HHhcCCCCCCeEEEEECCcHhHHHHHHHHHHHHHHhhccCeEEEEEcCCcc--------
Confidence 65432211 00111 2222222234466666666542221 2233444455444455666666431
Q ss_pred cccCCCCCCchhHHHHhcCCeEEEEec-cHHHhhhccccceeeeccCchhHHHHHhcCCcEEeccC----ccccchhHHH
Q 045570 320 RYVTNNGVFPEGFLERIKGRGMIWGWV-PQVEILAHKAIGGFVSHCGWNSILESLWYGVPIATWPI----YAEQQLNAFR 394 (468)
Q Consensus 320 ~~~~~~~~lp~~~~~~~~~~~~v~~~v-pq~~iL~~~~~~~~i~HgG~~s~~eal~~GvP~v~~P~----~~DQ~~na~~ 394 (468)
.+.+.+...+ ..+|+.+.+|+ ....+|..+++ +|+++|.+++.||+.+|+|+|++|. ..+|..|+..
T Consensus 223 -----~~~l~~~~~~-~~~~v~~~g~~~~~~~~l~~ad~--~v~~sg~~t~~Eam~~G~Pvv~~~~~~~~~~~~~~~~~~ 294 (350)
T cd03785 223 -----LEEVKKAYEE-LGVNYEVFPFIDDMAAAYAAADL--VISRAGASTVAELAALGLPAILIPLPYAADDHQTANARA 294 (350)
T ss_pred -----HHHHHHHHhc-cCCCeEEeehhhhHHHHHHhcCE--EEECCCHhHHHHHHHhCCCEEEeecCCCCCCcHHHhHHH
Confidence 0111111111 13588888998 56679999999 9999999999999999999999986 4678899999
Q ss_pred HHhhhceEEEeeeccccCCcccChhHHHHHHHHHhcCcHHHHHHHH
Q 045570 395 MVKELGLALDLRLDYRVGSDLVMAGDIESAVRCLMDGENKIRKKVK 440 (468)
Q Consensus 395 ~~~~~G~G~~~~~~~~~~~~~~~~~~l~~av~~vl~~~~~~~~~a~ 440 (468)
+.+. |.|+.+.. ...+.+++.++++++++ |++.+++..
T Consensus 295 l~~~-g~g~~v~~------~~~~~~~l~~~i~~ll~-~~~~~~~~~ 332 (350)
T cd03785 295 LVKA-GAAVLIPQ------EELTPERLAAALLELLS-DPERLKAMA 332 (350)
T ss_pred HHhC-CCEEEEec------CCCCHHHHHHHHHHHhc-CHHHHHHHH
Confidence 8887 99988873 24689999999999998 666554433
No 34
>TIGR00215 lpxB lipid-A-disaccharide synthase. Lipid-A precursor biosynthesis producing lipid A disaccharide in a condensation reaction. transcribed as part of an operon including lpxA
Probab=99.66 E-value=1.4e-14 Score=142.13 Aligned_cols=106 Identities=11% Similarity=0.091 Sum_probs=87.7
Q ss_pred HHHhhhccccceeeeccCchhHHHHHhcCCcEEec----cCcc---------ccchhHHHHHhhhceEEEeeeccccCCc
Q 045570 348 QVEILAHKAIGGFVSHCGWNSILESLWYGVPIATW----PIYA---------EQQLNAFRMVKELGLALDLRLDYRVGSD 414 (468)
Q Consensus 348 q~~iL~~~~~~~~i~HgG~~s~~eal~~GvP~v~~----P~~~---------DQ~~na~~~~~~~G~G~~~~~~~~~~~~ 414 (468)
...++..+|+ +|+-+|..|+ |++++|+|+|++ |+.. +|..|+..++.+ ++..++. .+
T Consensus 261 ~~~~l~aADl--~V~~SGt~tl-Ea~a~G~P~Vv~yk~~pl~~~~~~~~~~~~~~~~~nil~~~-~~~pel~------q~ 330 (385)
T TIGR00215 261 ARKAMFAADA--ALLASGTAAL-EAALIKTPMVVGYRMKPLTFLIARRLVKTDYISLPNILANR-LLVPELL------QE 330 (385)
T ss_pred HHHHHHhCCE--EeecCCHHHH-HHHHcCCCEEEEEcCCHHHHHHHHHHHcCCeeeccHHhcCC-ccchhhc------CC
Confidence 4458999999 9999999887 999999999999 7642 388899998887 8888776 45
Q ss_pred ccChhHHHHHHHHHhcCcH----HHHHHHHHHHHHHHHhhhcCCChHHHHHHHH
Q 045570 415 LVMAGDIESAVRCLMDGEN----KIRKKVKEMAEISRKSLMEGGSSFNSIGQFI 464 (468)
Q Consensus 415 ~~~~~~l~~av~~vl~~~~----~~~~~a~~l~~~~~~~~~~gg~~~~~~~~~~ 464 (468)
.+|++.|.+++.++++ |+ +++++.++--..+++.+.++|++.+..+.++
T Consensus 331 ~~~~~~l~~~~~~ll~-~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~a~~i~ 383 (385)
T TIGR00215 331 ECTPHPLAIALLLLLE-NGLKAYKEMHRERQFFEELRQRIYCNADSERAAQAVL 383 (385)
T ss_pred CCCHHHHHHHHHHHhc-CCcccHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHh
Confidence 8999999999999998 77 7887777777777777777788776665554
No 35
>TIGR01133 murG undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase. RL J Bacteriol 1993 Mar;175(6):1841-3
Probab=99.63 E-value=4.3e-13 Score=130.72 Aligned_cols=83 Identities=19% Similarity=0.186 Sum_probs=69.3
Q ss_pred cHHHhhhccccceeeeccCchhHHHHHhcCCcEEeccCc---cccchhHHHHHhhhceEEEeeeccccCCcccChhHHHH
Q 045570 347 PQVEILAHKAIGGFVSHCGWNSILESLWYGVPIATWPIY---AEQQLNAFRMVKELGLALDLRLDYRVGSDLVMAGDIES 423 (468)
Q Consensus 347 pq~~iL~~~~~~~~i~HgG~~s~~eal~~GvP~v~~P~~---~DQ~~na~~~~~~~G~G~~~~~~~~~~~~~~~~~~l~~ 423 (468)
+...+|+.+++ +|+++|.++++|++++|+|+|+.|.. .+|..|+..+.+. |.|..+. .+..+.++|.+
T Consensus 243 ~~~~~l~~ad~--~v~~~g~~~l~Ea~~~g~Pvv~~~~~~~~~~~~~~~~~i~~~-~~G~~~~------~~~~~~~~l~~ 313 (348)
T TIGR01133 243 NMAAAYAAADL--VISRAGASTVAELAAAGVPAILIPYPYAADDQYYNAKFLEDL-GAGLVIR------QKELLPEKLLE 313 (348)
T ss_pred CHHHHHHhCCE--EEECCChhHHHHHHHcCCCEEEeeCCCCccchhhHHHHHHHC-CCEEEEe------cccCCHHHHHH
Confidence 45678999999 99999988999999999999999873 4678888888776 9998876 23568999999
Q ss_pred HHHHHhcCcHHHHHHH
Q 045570 424 AVRCLMDGENKIRKKV 439 (468)
Q Consensus 424 av~~vl~~~~~~~~~a 439 (468)
+++++++ |++.+++.
T Consensus 314 ~i~~ll~-~~~~~~~~ 328 (348)
T TIGR01133 314 ALLKLLL-DPANLEAM 328 (348)
T ss_pred HHHHHHc-CHHHHHHH
Confidence 9999998 77665543
No 36
>PRK13609 diacylglycerol glucosyltransferase; Provisional
Probab=99.60 E-value=1e-12 Score=129.64 Aligned_cols=161 Identities=14% Similarity=0.277 Sum_probs=107.2
Q ss_pred CCcEEEEeccCccccCHHHHHHHHHHHHhC-CCcEEEEEecCCCCCccccccccCCCCCCchhHHH---HhcCCeEEEEe
Q 045570 270 ESSVVFLCFGSSGSFDVAQVKEIAIGLERS-GYNFLWSLRVSSPKDEVSAHRYVTNNGVFPEGFLE---RIKGRGMIWGW 345 (468)
Q Consensus 270 ~~~vv~vs~GS~~~~~~~~~~~~~~al~~~-~~~~iw~~~~~~~~~~~~~~~~~~~~~~lp~~~~~---~~~~~~~v~~~ 345 (468)
++++|++.-|+.... ..+..+++++.+. +.++++..|.+. .+-+.+.+ ..++++.+.+|
T Consensus 201 ~~~~il~~~G~~~~~--k~~~~li~~l~~~~~~~~viv~G~~~---------------~~~~~l~~~~~~~~~~v~~~g~ 263 (380)
T PRK13609 201 NKKILLIMAGAHGVL--GNVKELCQSLMSVPDLQVVVVCGKNE---------------ALKQSLEDLQETNPDALKVFGY 263 (380)
T ss_pred CCcEEEEEcCCCCCC--cCHHHHHHHHhhCCCcEEEEEeCCCH---------------HHHHHHHHHHhcCCCcEEEEec
Confidence 345777777776432 2355677777553 567777665431 01111211 12347888899
Q ss_pred ccHH-HhhhccccceeeeccCchhHHHHHhcCCcEEec-cCccccchhHHHHHhhhceEEEeeeccccCCcccChhHHHH
Q 045570 346 VPQV-EILAHKAIGGFVSHCGWNSILESLWYGVPIATW-PIYAEQQLNAFRMVKELGLALDLRLDYRVGSDLVMAGDIES 423 (468)
Q Consensus 346 vpq~-~iL~~~~~~~~i~HgG~~s~~eal~~GvP~v~~-P~~~DQ~~na~~~~~~~G~G~~~~~~~~~~~~~~~~~~l~~ 423 (468)
+++. +++..+++ +|+..|..|+.||+++|+|+|+. |..+.|..|+..+.+. |+|+... +.+++.+
T Consensus 264 ~~~~~~l~~~aD~--~v~~~gg~t~~EA~a~g~PvI~~~~~~g~~~~n~~~~~~~-G~~~~~~----------~~~~l~~ 330 (380)
T PRK13609 264 VENIDELFRVTSC--MITKPGGITLSEAAALGVPVILYKPVPGQEKENAMYFERK-GAAVVIR----------DDEEVFA 330 (380)
T ss_pred hhhHHHHHHhccE--EEeCCCchHHHHHHHhCCCEEECCCCCCcchHHHHHHHhC-CcEEEEC----------CHHHHHH
Confidence 9874 69999998 99999988999999999999985 7777788899888776 9887543 5789999
Q ss_pred HHHHHhcCcHHHHHHHHHHHHHHHHhhhcCCChHHHHHHHHH
Q 045570 424 AVRCLMDGENKIRKKVKEMAEISRKSLMEGGSSFNSIGQFIS 465 (468)
Q Consensus 424 av~~vl~~~~~~~~~a~~l~~~~~~~~~~gg~~~~~~~~~~~ 465 (468)
+|.++++ |++.+++.+ +..++. ..+.+...-++.+++
T Consensus 331 ~i~~ll~-~~~~~~~m~---~~~~~~-~~~~s~~~i~~~i~~ 367 (380)
T PRK13609 331 KTEALLQ-DDMKLLQMK---EAMKSL-YLPEPADHIVDDILA 367 (380)
T ss_pred HHHHHHC-CHHHHHHHH---HHHHHh-CCCchHHHHHHHHHH
Confidence 9999998 676554433 333332 223454444444443
No 37
>PRK00025 lpxB lipid-A-disaccharide synthase; Reviewed
Probab=99.49 E-value=4.4e-12 Score=125.19 Aligned_cols=106 Identities=14% Similarity=0.097 Sum_probs=67.4
Q ss_pred HHHhhhccccceeeeccCchhHHHHHhcCCcEEeccCccccc-hhH------------HHHHhhhceEEEeeeccccCCc
Q 045570 348 QVEILAHKAIGGFVSHCGWNSILESLWYGVPIATWPIYAEQQ-LNA------------FRMVKELGLALDLRLDYRVGSD 414 (468)
Q Consensus 348 q~~iL~~~~~~~~i~HgG~~s~~eal~~GvP~v~~P~~~DQ~-~na------------~~~~~~~G~G~~~~~~~~~~~~ 414 (468)
-..++..+|+ +|+.+|.+++ |++.+|+|+|+.|-..--+ ..+ ..+++. +++..+. ..
T Consensus 255 ~~~~~~~aDl--~v~~sG~~~l-Ea~a~G~PvI~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~~~~------~~ 324 (380)
T PRK00025 255 KREAMAAADA--ALAASGTVTL-ELALLKVPMVVGYKVSPLTFWIAKRLVKVPYVSLPNLLAGR-ELVPELL------QE 324 (380)
T ss_pred HHHHHHhCCE--EEECccHHHH-HHHHhCCCEEEEEccCHHHHHHHHHHHcCCeeehHHHhcCC-Ccchhhc------CC
Confidence 3568899999 9999998887 9999999999995432111 111 222222 2232232 23
Q ss_pred ccChhHHHHHHHHHhcCcHHHHHHHHHHHHHHHHhhhcCCChHHHHHHHHH
Q 045570 415 LVMAGDIESAVRCLMDGENKIRKKVKEMAEISRKSLMEGGSSFNSIGQFIS 465 (468)
Q Consensus 415 ~~~~~~l~~av~~vl~~~~~~~~~a~~l~~~~~~~~~~gg~~~~~~~~~~~ 465 (468)
..+++++.+++.++++ |++.+++..+-.+.+++.. ..|++.+.++.+.+
T Consensus 325 ~~~~~~l~~~i~~ll~-~~~~~~~~~~~~~~~~~~~-~~~a~~~~~~~i~~ 373 (380)
T PRK00025 325 EATPEKLARALLPLLA-DGARRQALLEGFTELHQQL-RCGADERAAQAVLE 373 (380)
T ss_pred CCCHHHHHHHHHHHhc-CHHHHHHHHHHHHHHHHHh-CCCHHHHHHHHHHH
Confidence 6789999999999999 7766665555444444444 34555555554443
No 38
>PRK13608 diacylglycerol glucosyltransferase; Provisional
Probab=99.48 E-value=6.9e-11 Score=116.74 Aligned_cols=161 Identities=12% Similarity=0.158 Sum_probs=106.5
Q ss_pred CCcEEEEeccCccccCHHHHHHHHHHHHh--CCCcEEEEEecCCCCCccccccccCCCCCCchhHHHH--hcCCeEEEEe
Q 045570 270 ESSVVFLCFGSSGSFDVAQVKEIAIGLER--SGYNFLWSLRVSSPKDEVSAHRYVTNNGVFPEGFLER--IKGRGMIWGW 345 (468)
Q Consensus 270 ~~~vv~vs~GS~~~~~~~~~~~~~~al~~--~~~~~iw~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~--~~~~~~v~~~ 345 (468)
++++|++..|+.... ..+..+++++.+ .+.++++..|.+. .+-+.+.+. ..+++.+.+|
T Consensus 201 ~~~~ilv~~G~lg~~--k~~~~li~~~~~~~~~~~~vvv~G~~~---------------~l~~~l~~~~~~~~~v~~~G~ 263 (391)
T PRK13608 201 DKQTILMSAGAFGVS--KGFDTMITDILAKSANAQVVMICGKSK---------------ELKRSLTAKFKSNENVLILGY 263 (391)
T ss_pred CCCEEEEECCCcccc--hhHHHHHHHHHhcCCCceEEEEcCCCH---------------HHHHHHHHHhccCCCeEEEec
Confidence 356888888887521 334555555432 3457767665431 111112211 2347888899
Q ss_pred ccHH-HhhhccccceeeeccCchhHHHHHhcCCcEEec-cCccccchhHHHHHhhhceEEEeeeccccCCcccChhHHHH
Q 045570 346 VPQV-EILAHKAIGGFVSHCGWNSILESLWYGVPIATW-PIYAEQQLNAFRMVKELGLALDLRLDYRVGSDLVMAGDIES 423 (468)
Q Consensus 346 vpq~-~iL~~~~~~~~i~HgG~~s~~eal~~GvP~v~~-P~~~DQ~~na~~~~~~~G~G~~~~~~~~~~~~~~~~~~l~~ 423 (468)
+++. .++..+|+ +|+..|..|+.||+++|+|+|+. |..+.|..|+..+.+. |+|+... +.+++.+
T Consensus 264 ~~~~~~~~~~aDl--~I~k~gg~tl~EA~a~G~PvI~~~~~pgqe~~N~~~~~~~-G~g~~~~----------~~~~l~~ 330 (391)
T PRK13608 264 TKHMNEWMASSQL--MITKPGGITISEGLARCIPMIFLNPAPGQELENALYFEEK-GFGKIAD----------TPEEAIK 330 (391)
T ss_pred cchHHHHHHhhhE--EEeCCchHHHHHHHHhCCCEEECCCCCCcchhHHHHHHhC-CcEEEeC----------CHHHHHH
Confidence 9755 48999999 99998888999999999999998 7777778999888887 9997643 7888999
Q ss_pred HHHHHhcCcHHHHHHHHHHHHHHHHhhhcCCChHHHHHHHHH
Q 045570 424 AVRCLMDGENKIRKKVKEMAEISRKSLMEGGSSFNSIGQFIS 465 (468)
Q Consensus 424 av~~vl~~~~~~~~~a~~l~~~~~~~~~~gg~~~~~~~~~~~ 465 (468)
+|.++++ |++.++ ++++..++.. ...+...-++.+++
T Consensus 331 ~i~~ll~-~~~~~~---~m~~~~~~~~-~~~s~~~i~~~l~~ 367 (391)
T PRK13608 331 IVASLTN-GNEQLT---NMISTMEQDK-IKYATQTICRDLLD 367 (391)
T ss_pred HHHHHhc-CHHHHH---HHHHHHHHhc-CCCCHHHHHHHHHH
Confidence 9999998 664433 3444444432 23444444444443
No 39
>PF04101 Glyco_tran_28_C: Glycosyltransferase family 28 C-terminal domain; InterPro: IPR007235 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 28 GT28 from CAZY comprises enzymes with a number of known activities; 1,2-diacylglycerol 3-beta-galactosyltransferase (2.4.1.46 from EC); 1,2-diacylglycerol 3-beta-glucosyltransferase (2.4.1.157 from EC); beta-N-acetylglucosamine transferase (2.4.1 from EC). Structural analysis suggests the C-terminal domain contains the UDP-GlcNAc binding site.; GO: 0016758 transferase activity, transferring hexosyl groups, 0030246 carbohydrate binding, 0005975 carbohydrate metabolic process, 0030259 lipid glycosylation; PDB: 2KS6_A 2JZC_A 1NLM_B 1F0K_B.
Probab=99.47 E-value=7e-15 Score=127.27 Aligned_cols=139 Identities=22% Similarity=0.291 Sum_probs=97.7
Q ss_pred EEEEeccCccccCHH-HHHHHHHHHHh--CCCcEEEEEecCCCCCccccccccCCCCCCchhHHHHhcCCeEEEEecc-H
Q 045570 273 VVFLCFGSSGSFDVA-QVKEIAIGLER--SGYNFLWSLRVSSPKDEVSAHRYVTNNGVFPEGFLERIKGRGMIWGWVP-Q 348 (468)
Q Consensus 273 vv~vs~GS~~~~~~~-~~~~~~~al~~--~~~~~iw~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~v~~~vp-q 348 (468)
+|+|+.||.....-. .+..++..+.. ....++|.+|.... +. ....+ +....++.+.+|.+ .
T Consensus 1 tilv~gGs~g~~~l~~~v~~~~~~~~~~~~~~~viv~~G~~~~---------~~----~~~~~-~~~~~~v~~~~~~~~m 66 (167)
T PF04101_consen 1 TILVTGGSQGARDLNRLVLKILELLAEKHKNIQVIVQTGKNNY---------EE----LKIKV-ENFNPNVKVFGFVDNM 66 (167)
T ss_dssp -EEEEETTTSHHHHHCCCCCHHHHHHHHHHHCCCCCCCTTCEC---------HH----HCCCH-CCTTCCCEEECSSSSH
T ss_pred CEEEEECCCCHHHHHHHHHHHHHHHhhcCCCcEEEEEECCCcH---------HH----HHHHH-hccCCcEEEEechhhH
Confidence 489999987543222 23334444443 35788999886521 00 00010 01125788999999 7
Q ss_pred HHhhhccccceeeeccCchhHHHHHhcCCcEEeccCcc----ccchhHHHHHhhhceEEEeeeccccCCcccChhHHHHH
Q 045570 349 VEILAHKAIGGFVSHCGWNSILESLWYGVPIATWPIYA----EQQLNAFRMVKELGLALDLRLDYRVGSDLVMAGDIESA 424 (468)
Q Consensus 349 ~~iL~~~~~~~~i~HgG~~s~~eal~~GvP~v~~P~~~----DQ~~na~~~~~~~G~G~~~~~~~~~~~~~~~~~~l~~a 424 (468)
..++..+|+ +|||||.||+.|++++|+|+|++|... +|..||..+++. |+|+.+.. ...+.++|.++
T Consensus 67 ~~~m~~aDl--vIs~aG~~Ti~E~l~~g~P~I~ip~~~~~~~~q~~na~~~~~~-g~~~~~~~------~~~~~~~L~~~ 137 (167)
T PF04101_consen 67 AELMAAADL--VISHAGAGTIAEALALGKPAIVIPLPGAADNHQEENAKELAKK-GAAIMLDE------SELNPEELAEA 137 (167)
T ss_dssp HHHHHHHSE--EEECS-CHHHHHHHHCT--EEEE--TTT-T-CHHHHHHHHHHC-CCCCCSEC------CC-SCCCHHHH
T ss_pred HHHHHHcCE--EEeCCCccHHHHHHHcCCCeeccCCCCcchHHHHHHHHHHHHc-CCccccCc------ccCCHHHHHHH
Confidence 789999999 999999999999999999999999988 999999999998 99988873 36779999999
Q ss_pred HHHHhcCcHHH
Q 045570 425 VRCLMDGENKI 435 (468)
Q Consensus 425 v~~vl~~~~~~ 435 (468)
|.+++. ++..
T Consensus 138 i~~l~~-~~~~ 147 (167)
T PF04101_consen 138 IEELLS-DPEK 147 (167)
T ss_dssp HHCHCC-CHH-
T ss_pred HHHHHc-CcHH
Confidence 999998 5543
No 40
>PLN02605 monogalactosyldiacylglycerol synthase
Probab=99.41 E-value=4.6e-10 Score=110.72 Aligned_cols=110 Identities=18% Similarity=0.180 Sum_probs=80.4
Q ss_pred CCeEEEEeccHHH-hhhccccceeeeccCchhHHHHHhcCCcEEeccCccccc-hhHHHHHhhhceEEEeeeccccCCcc
Q 045570 338 GRGMIWGWVPQVE-ILAHKAIGGFVSHCGWNSILESLWYGVPIATWPIYAEQQ-LNAFRMVKELGLALDLRLDYRVGSDL 415 (468)
Q Consensus 338 ~~~~v~~~vpq~~-iL~~~~~~~~i~HgG~~s~~eal~~GvP~v~~P~~~DQ~-~na~~~~~~~G~G~~~~~~~~~~~~~ 415 (468)
.++.+.+|+++.. ++..+|+ +|+.+|.+|+.||+++|+|+|+.+....|. .|+..+.+. |.|+.+.
T Consensus 265 ~~v~~~G~~~~~~~l~~aaDv--~V~~~g~~ti~EAma~g~PvI~~~~~pgqe~gn~~~i~~~-g~g~~~~--------- 332 (382)
T PLN02605 265 IPVKVRGFVTNMEEWMGACDC--IITKAGPGTIAEALIRGLPIILNGYIPGQEEGNVPYVVDN-GFGAFSE--------- 332 (382)
T ss_pred CCeEEEeccccHHHHHHhCCE--EEECCCcchHHHHHHcCCCEEEecCCCccchhhHHHHHhC-CceeecC---------
Confidence 4678889998544 8899999 999999999999999999999998776776 688888876 9997542
Q ss_pred cChhHHHHHHHHHhcCcHHHHHHHHHHHHHHHHhhhcCCChHHHHHHHH
Q 045570 416 VMAGDIESAVRCLMDGENKIRKKVKEMAEISRKSLMEGGSSFNSIGQFI 464 (468)
Q Consensus 416 ~~~~~l~~av~~vl~~~~~~~~~a~~l~~~~~~~~~~gg~~~~~~~~~~ 464 (468)
+++++.++|.+++.++++.+++ +++..++.. ...++..-++.+.
T Consensus 333 -~~~~la~~i~~ll~~~~~~~~~---m~~~~~~~~-~~~a~~~i~~~l~ 376 (382)
T PLN02605 333 -SPKEIARIVAEWFGDKSDELEA---MSENALKLA-RPEAVFDIVHDLH 376 (382)
T ss_pred -CHHHHHHHHHHHHcCCHHHHHH---HHHHHHHhc-CCchHHHHHHHHH
Confidence 7899999999999832544433 444444432 2334444344443
No 41
>TIGR03492 conserved hypothetical protein. This protein family is restricted to the Cyanobacteria, in one or two copies, save for instances in the genus Deinococcus. This protein shows some sequence similarity, especially toward the C-terminus, to lipid-A-disaccharide synthase (TIGR00215 or pfam02684). The function is unknown.
Probab=99.40 E-value=5.8e-10 Score=109.72 Aligned_cols=171 Identities=16% Similarity=0.121 Sum_probs=101.4
Q ss_pred CcEEEEeccCccccCHHHHHHHHHHHHh----CCCcEEEEEecCCCCCccccccccCCCCCCch-hHHH---------H-
Q 045570 271 SSVVFLCFGSSGSFDVAQVKEIAIGLER----SGYNFLWSLRVSSPKDEVSAHRYVTNNGVFPE-GFLE---------R- 335 (468)
Q Consensus 271 ~~vv~vs~GS~~~~~~~~~~~~~~al~~----~~~~~iw~~~~~~~~~~~~~~~~~~~~~~lp~-~~~~---------~- 335 (468)
.++|.+--||....-...+..++++++. .+..|++.+.++.... .....+.+ +... .
T Consensus 205 ~~~lllLpGSR~ae~~~~lp~~l~al~~L~~~~~~~~v~~~~~~~~~~--------~~~~~l~~~g~~~~~~~~~~~~~~ 276 (396)
T TIGR03492 205 RFRIALLPGSRPPEAYRNLKLLLRALEALPDSQPFVFLAAIVPSLSLE--------KLQAILEDLGWQLEGSSEDQTSLF 276 (396)
T ss_pred CCEEEEECCCCHHHHHccHHHHHHHHHHHhhCCCeEEEEEeCCCCCHH--------HHHHHHHhcCceecCCccccchhh
Confidence 4588888888753333334445555544 3678888874331000 00000000 0000 0
Q ss_pred hcCCeEEEEecc-HHHhhhccccceeeeccCchhHHHHHhcCCcEEeccCccccchhHHHHHhh---hceEEEeeecccc
Q 045570 336 IKGRGMIWGWVP-QVEILAHKAIGGFVSHCGWNSILESLWYGVPIATWPIYAEQQLNAFRMVKE---LGLALDLRLDYRV 411 (468)
Q Consensus 336 ~~~~~~v~~~vp-q~~iL~~~~~~~~i~HgG~~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~---~G~G~~~~~~~~~ 411 (468)
..+++.+..+.. -..++..+++ +|+-.|..| .|+...|+|+|++|.-..|. |+...++. .|.++.+.
T Consensus 277 ~~~~~~v~~~~~~~~~~l~~ADl--vI~rSGt~T-~E~a~lg~P~Ilip~~~~q~-na~~~~~~~~l~g~~~~l~----- 347 (396)
T TIGR03492 277 QKGTLEVLLGRGAFAEILHWADL--GIAMAGTAT-EQAVGLGKPVIQLPGKGPQF-TYGFAEAQSRLLGGSVFLA----- 347 (396)
T ss_pred ccCceEEEechHhHHHHHHhCCE--EEECcCHHH-HHHHHhCCCEEEEeCCCCHH-HHHHHHhhHhhcCCEEecC-----
Confidence 012345555543 4569999999 999999766 99999999999999877786 88665542 15556554
Q ss_pred CCcccChhHHHHHHHHHhcCcHHHHHHHHHHHHHHHHhhhcCCChHHHHHHHHH
Q 045570 412 GSDLVMAGDIESAVRCLMDGENKIRKKVKEMAEISRKSLMEGGSSFNSIGQFIS 465 (468)
Q Consensus 412 ~~~~~~~~~l~~av~~vl~~~~~~~~~a~~l~~~~~~~~~~gg~~~~~~~~~~~ 465 (468)
..+.+.|.+++.++++ |++.+++.. +..++.+.+++++.+-++.+.+
T Consensus 348 ---~~~~~~l~~~l~~ll~-d~~~~~~~~---~~~~~~lg~~~a~~~ia~~i~~ 394 (396)
T TIGR03492 348 ---SKNPEQAAQVVRQLLA-DPELLERCR---RNGQERMGPPGASARIAESILK 394 (396)
T ss_pred ---CCCHHHHHHHHHHHHc-CHHHHHHHH---HHHHHhcCCCCHHHHHHHHHHH
Confidence 3455999999999998 666554443 2333344455666554444433
No 42
>TIGR03590 PseG pseudaminic acid biosynthesis-associated protein PseG. This protein is found in association with enzymes involved in the biosynthesis of pseudaminic acid, a component of polysaccharide in certain Pseudomonas strains as well as a modification of flagellin in Campylobacter and Hellicobacter. The role of this protein is unclear, although it may participate in N-acetylation in conjunction with, or in the absence of PseH (TIGR03585) as it often scores above the trusted cutoff to pfam00583 representing a family of acetyltransferases.
Probab=99.39 E-value=1.2e-10 Score=109.12 Aligned_cols=103 Identities=16% Similarity=0.169 Sum_probs=77.0
Q ss_pred cEEEEeccCccccCHHHHHHHHHHHHhC--CCcEEEEEecCCCCCccccccccCCCCCCchhHHHH--hcCCeEEEEecc
Q 045570 272 SVVFLCFGSSGSFDVAQVKEIAIGLERS--GYNFLWSLRVSSPKDEVSAHRYVTNNGVFPEGFLER--IKGRGMIWGWVP 347 (468)
Q Consensus 272 ~vv~vs~GS~~~~~~~~~~~~~~al~~~--~~~~iw~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~--~~~~~~v~~~vp 347 (468)
+.|+|+||..... .....++++|... +..+.+++|.+.. ..+.+.+. ..+|+.+..+++
T Consensus 171 ~~iLi~~GG~d~~--~~~~~~l~~l~~~~~~~~i~vv~G~~~~---------------~~~~l~~~~~~~~~i~~~~~~~ 233 (279)
T TIGR03590 171 RRVLVSFGGADPD--NLTLKLLSALAESQINISITLVTGSSNP---------------NLDELKKFAKEYPNIILFIDVE 233 (279)
T ss_pred CeEEEEeCCcCCc--CHHHHHHHHHhccccCceEEEEECCCCc---------------CHHHHHHHHHhCCCEEEEeCHH
Confidence 4789999864432 2345566776653 5678888886521 11222221 235788889999
Q ss_pred HH-HhhhccccceeeeccCchhHHHHHhcCCcEEeccCccccchhHHH
Q 045570 348 QV-EILAHKAIGGFVSHCGWNSILESLWYGVPIATWPIYAEQQLNAFR 394 (468)
Q Consensus 348 q~-~iL~~~~~~~~i~HgG~~s~~eal~~GvP~v~~P~~~DQ~~na~~ 394 (468)
+. .++..+++ +||+|| +|++|+++.|+|+|++|+..+|..||+.
T Consensus 234 ~m~~lm~~aDl--~Is~~G-~T~~E~~a~g~P~i~i~~~~nQ~~~a~~ 278 (279)
T TIGR03590 234 NMAELMNEADL--AIGAAG-STSWERCCLGLPSLAICLAENQQSNSQQ 278 (279)
T ss_pred HHHHHHHHCCE--EEECCc-hHHHHHHHcCCCEEEEEecccHHHHhhh
Confidence 86 69999999 999999 9999999999999999999999999964
No 43
>COG4671 Predicted glycosyl transferase [General function prediction only]
Probab=99.31 E-value=6.8e-10 Score=101.77 Aligned_cols=332 Identities=18% Similarity=0.206 Sum_probs=184.4
Q ss_pred CCcEEEEEcCC--CCCChHHHHHHHHHHHhC--CCCeEEEEEecCCCCChhhhhhhcccCCCCCCeEEEeCCCCCC--CC
Q 045570 2 KKAELIFVPSP--GIGHLVSTLEFAKHLTDR--DDRISVTILSMKLAVAPWVDAYTKSLTDSQPRICVIDLPPVDP--PL 75 (468)
Q Consensus 2 ~k~~i~~~~~p--~~GH~~P~l~La~~L~~r--GH~~~Vt~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~--~~ 75 (468)
+.+||+|++.- +-||+.=...+|++|.+. |-+ |+++++...... .....+++++.+|.... .+
T Consensus 8 ~~~Ri~~Yshd~~GlGHlrR~~~Ia~aLv~d~~~~~--Il~IsG~~~~~~---------F~~~~gVd~V~LPsl~k~~~G 76 (400)
T COG4671 8 KRPRILFYSHDLLGLGHLRRALRIAHALVEDYLGFD--ILIISGGPPAGG---------FPGPAGVDFVKLPSLIKGDNG 76 (400)
T ss_pred ccceEEEEehhhccchHHHHHHHHHHHHhhcccCce--EEEEeCCCccCC---------CCCcccCceEecCceEecCCC
Confidence 34589999986 778999999999999998 855 999998633211 22346799999986431 11
Q ss_pred C---CCcCCChHHHHHHHHHhhchhHHHHHHhhhccCCCCccEEEEcCCcchHHHHHHHcCCCeEEEeCchhHHHHHHhh
Q 045570 76 P---DVLKKSPEYFISLVVESHLPNVKNIVSSRSNSGSLQVTGLVLDFFCVSMVDIAKELSLPSYMFLTSNMGFLRLMLY 152 (468)
Q Consensus 76 ~---~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~D~vv~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~ 152 (468)
. .....+ ...+.+.-...+...++.+ +||++|+|.+-.+. --|. .|.. .+..
T Consensus 77 ~~~~~d~~~~----l~e~~~~Rs~lil~t~~~f------kPDi~IVd~~P~Gl--r~EL--~ptL-----------~yl~ 131 (400)
T COG4671 77 EYGLVDLDGD----LEETKKLRSQLILSTAETF------KPDIFIVDKFPFGL--RFEL--LPTL-----------EYLK 131 (400)
T ss_pred ceeeeecCCC----HHHHHHHHHHHHHHHHHhc------CCCEEEEeccccch--hhhh--hHHH-----------HHHh
Confidence 1 111112 2223333333455555555 99999999965431 0110 1100 0000
Q ss_pred hhcccccccccccCCCCccccCCCCCCCCCCcCCCccccCCcchHHHHHHHhhccCCcEEEE---cCccccCHHHHHHhh
Q 045570 153 LPTRQDRISTVFESSDDELLIPGITSPVPVCVMPSCLFNKDGGHATLVKLAQRFKDVDGIIV---NTFHELEPYAVNAFS 229 (468)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~s~~~l~~~~~~~~~ 229 (468)
.. ... .+-++ ....+.+......- ..+...+.+++ .-+.+.+ +.|+.+...+.. .
T Consensus 132 -----~~--------~t~-~vL~l---r~i~D~p~~~~~~w-~~~~~~~~I~r--~yD~V~v~GdP~f~d~~~~~~~--~ 189 (400)
T COG4671 132 -----TT--------GTR-LVLGL---RSIRDIPQELEADW-RRAETVRLINR--FYDLVLVYGDPDFYDPLTEFPF--A 189 (400)
T ss_pred -----hc--------CCc-ceeeh---Hhhhhchhhhccch-hhhHHHHHHHH--hheEEEEecCccccChhhcCCc--c
Confidence 00 000 00000 01111221111100 01111222211 1223332 334443322100 0
Q ss_pred cCCCCCeEEeccccCCCCCCCCCCChhcHhHHHHhhhcCCCCcEEEEeccCccccCHHHHHHHHHHHHh-CCCc--EEEE
Q 045570 230 GDLNPPLYTAGPVLHLKSQPNPDLDEAQYQKIFQWLDDLAESSVVFLCFGSSGSFDVAQVKEIAIGLER-SGYN--FLWS 306 (468)
Q Consensus 230 ~~~~p~v~~vGpl~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vv~vs~GS~~~~~~~~~~~~~~al~~-~~~~--~iw~ 306 (468)
...-.++.++|.+...-+.. +.+.. ..+++.-|.||-|-- ....+.+...+.|-.. .+.+ .+..
T Consensus 190 ~~i~~k~~ytG~vq~~~~~~------~~p~~------~~pE~~~Ilvs~GGG-~dG~eLi~~~l~A~~~l~~l~~~~~iv 256 (400)
T COG4671 190 PAIRAKMRYTGFVQRSLPHL------PLPPH------EAPEGFDILVSVGGG-ADGAELIETALAAAQLLAGLNHKWLIV 256 (400)
T ss_pred HhhhhheeEeEEeeccCcCC------CCCCc------CCCccceEEEecCCC-hhhHHHHHHHHHHhhhCCCCCcceEEE
Confidence 00112488999883211110 00000 002334688877762 3345556666555433 3443 6666
Q ss_pred EecCCCCCccccccccCCCCCCchhHHHH----hc--CCeEEEEeccHHH-hhhccccceeeeccCchhHHHHHhcCCcE
Q 045570 307 LRVSSPKDEVSAHRYVTNNGVFPEGFLER----IK--GRGMIWGWVPQVE-ILAHKAIGGFVSHCGWNSILESLWYGVPI 379 (468)
Q Consensus 307 ~~~~~~~~~~~~~~~~~~~~~lp~~~~~~----~~--~~~~v~~~vpq~~-iL~~~~~~~~i~HgG~~s~~eal~~GvP~ 379 (468)
+|+. .|+...++ .+ +++.+..|-.+.. ++.-++. +|+-||+||++|-|.+|+|.
T Consensus 257 tGP~-----------------MP~~~r~~l~~~A~~~p~i~I~~f~~~~~~ll~gA~~--vVSm~GYNTvCeILs~~k~a 317 (400)
T COG4671 257 TGPF-----------------MPEAQRQKLLASAPKRPHISIFEFRNDFESLLAGARL--VVSMGGYNTVCEILSFGKPA 317 (400)
T ss_pred eCCC-----------------CCHHHHHHHHHhcccCCCeEEEEhhhhHHHHHHhhhe--eeecccchhhhHHHhCCCce
Confidence 6654 44432222 22 5788888876554 8888888 99999999999999999999
Q ss_pred EeccCc---cccchhHHHHHhhhceEEEeeeccccCCcccChhHHHHHHHHHhc
Q 045570 380 ATWPIY---AEQQLNAFRMVKELGLALDLRLDYRVGSDLVMAGDIESAVRCLMD 430 (468)
Q Consensus 380 v~~P~~---~DQ~~na~~~~~~~G~G~~~~~~~~~~~~~~~~~~l~~av~~vl~ 430 (468)
+++|+. .+|-.-|.|+++. |+-=.+. ++.++++.+.++|+..++
T Consensus 318 LivPr~~p~eEQliRA~Rl~~L-GL~dvL~------pe~lt~~~La~al~~~l~ 364 (400)
T COG4671 318 LIVPRAAPREEQLIRAQRLEEL-GLVDVLL------PENLTPQNLADALKAALA 364 (400)
T ss_pred EEeccCCCcHHHHHHHHHHHhc-CcceeeC------cccCChHHHHHHHHhccc
Confidence 999986 4899999998874 9886666 458999999999999987
No 44
>PF03033 Glyco_transf_28: Glycosyltransferase family 28 N-terminal domain; InterPro: IPR004276 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 28 GT28 from CAZY comprises enzymes with a number of known activities; 1,2-diacylglycerol 3-beta-galactosyltransferase (2.4.1.46 from EC); 1,2-diacylglycerol 3-beta-glucosyltransferase (2.4.1.157 from EC); beta-N-acetylglucosamine transferase (2.4.1 from EC).; GO: 0016758 transferase activity, transferring hexosyl groups, 0005975 carbohydrate metabolic process, 0030259 lipid glycosylation; PDB: 2IYF_B 2YJN_A 2P6P_A 1PNV_A 3H4T_A 3H4I_A 1PN3_B 3IA7_B 1NLM_B 1F0K_B ....
Probab=99.24 E-value=1.2e-11 Score=103.56 Aligned_cols=124 Identities=14% Similarity=0.165 Sum_probs=76.4
Q ss_pred EEEEcCCCCCChHHHHHHHHHHHhCCCCeEEEEEecCCCCChhhhhhhcccCCCCCCeEEEeCCCCCCCCCCCcCCChHH
Q 045570 6 LIFVPSPGIGHLVSTLEFAKHLTDRDDRISVTILSMKLAVAPWVDAYTKSLTDSQPRICVIDLPPVDPPLPDVLKKSPEY 85 (468)
Q Consensus 6 i~~~~~p~~GH~~P~l~La~~L~~rGH~~~Vt~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 85 (468)
|+|.+.|+.||++|+++||++|++|||+ |++++++ .+...++ ..|++|.+++.. ...... .....
T Consensus 1 Ili~~~Gt~Ghv~P~lala~~L~~rGh~--V~~~~~~-----~~~~~v~-----~~Gl~~~~~~~~-~~~~~~--~~~~~ 65 (139)
T PF03033_consen 1 ILIATGGTRGHVYPFLALARALRRRGHE--VRLATPP-----DFRERVE-----AAGLEFVPIPGD-SRLPRS--LEPLA 65 (139)
T ss_dssp EEEEEESSHHHHHHHHHHHHHHHHTT-E--EEEEETG-----GGHHHHH-----HTT-EEEESSSC-GGGGHH--HHHHH
T ss_pred CEEEEcCChhHHHHHHHHHHHHhccCCe--EEEeecc-----cceeccc-----ccCceEEEecCC-cCcCcc--cchhh
Confidence 7899999999999999999999999999 9999987 3333343 347999998765 000000 00111
Q ss_pred HHHHHHHh--hchhHHHHHHhhhc------cCCCCccEEEEcCCcchHHHHHHHcCCCeEEEeCchh
Q 045570 86 FISLVVES--HLPNVKNIVSSRSN------SGSLQVTGLVLDFFCVSMVDIAKELSLPSYMFLTSNM 144 (468)
Q Consensus 86 ~~~~~~~~--~~~~~~~~l~~~~~------~~~~~~D~vv~D~~~~~~~~~A~~lgiP~v~~~~~~~ 144 (468)
.+...... ....+.+.+++... ......|+++.+.....+..+||++|||++.....+.
T Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~vaE~~~iP~~~~~~~p~ 132 (139)
T PF03033_consen 66 NLRRLARLIRGLEEAMRILARFRPDLVVAAGGYVADDVIIAAPLAFAAALVAEQLGIPGVANRLFPW 132 (139)
T ss_dssp HHHCHHHHHHHHHHHHHHHHHHHHCCCCHCTTTTECCEECHHHHHTHHHHHHHHHTS-EEEEESSGG
T ss_pred hhhhHHHHhhhhhHHHHHhhccCcchhhhccCcccchHHHhhhhcCccceeEhhhCchHHHHhhCCc
Confidence 11111111 11122222222211 1223677888888888889999999999998877654
No 45
>cd03814 GT1_like_2 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=99.17 E-value=1.6e-07 Score=91.45 Aligned_cols=157 Identities=15% Similarity=0.117 Sum_probs=97.0
Q ss_pred cEEEEeccCccc-cCHHHHHHHHHHHHhC-CCcEEEEEecCCCCCccccccccCCCCCCchhHHHHhcCCeEEEEeccHH
Q 045570 272 SVVFLCFGSSGS-FDVAQVKEIAIGLERS-GYNFLWSLRVSSPKDEVSAHRYVTNNGVFPEGFLERIKGRGMIWGWVPQV 349 (468)
Q Consensus 272 ~vv~vs~GS~~~-~~~~~~~~~~~al~~~-~~~~iw~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~v~~~vpq~ 349 (468)
..+++..|++.. ...+.+.++++.+... +..+++. |.+. ..+.+. ....++.+.+|+++.
T Consensus 197 ~~~i~~~G~~~~~k~~~~~i~~~~~l~~~~~~~l~i~-G~~~----------------~~~~~~-~~~~~v~~~g~~~~~ 258 (364)
T cd03814 197 RPVLLYVGRLAPEKNLEALLDADLPLRRRPPVRLVIV-GDGP----------------ARARLE-ARYPNVHFLGFLDGE 258 (364)
T ss_pred CeEEEEEeccccccCHHHHHHHHHHhhhcCCceEEEE-eCCc----------------hHHHHh-ccCCcEEEEeccCHH
Confidence 356677777642 3334455555555432 3454444 4321 001111 234678899999977
Q ss_pred H---hhhccccceeeeccC----chhHHHHHhcCCcEEeccCccccchhHHHHHhhhceEEEeeeccccCCcccChhHHH
Q 045570 350 E---ILAHKAIGGFVSHCG----WNSILESLWYGVPIATWPIYAEQQLNAFRMVKELGLALDLRLDYRVGSDLVMAGDIE 422 (468)
Q Consensus 350 ~---iL~~~~~~~~i~HgG----~~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~G~G~~~~~~~~~~~~~~~~~~l~ 422 (468)
+ ++..+++ +|..+. .++++||+++|+|+|+.+..+ +...+.+. +.|..+. .-+.+++.
T Consensus 259 ~~~~~~~~~d~--~l~~s~~e~~~~~~lEa~a~g~PvI~~~~~~----~~~~i~~~-~~g~~~~--------~~~~~~l~ 323 (364)
T cd03814 259 ELAAAYASADV--FVFPSRTETFGLVVLEAMASGLPVVAPDAGG----PADIVTDG-ENGLLVE--------PGDAEAFA 323 (364)
T ss_pred HHHHHHHhCCE--EEECcccccCCcHHHHHHHcCCCEEEcCCCC----chhhhcCC-cceEEcC--------CCCHHHHH
Confidence 6 7888898 886654 478999999999999987654 44455554 7887765 45778899
Q ss_pred HHHHHHhcCcHHHHHHHHHHHHHHHHhhhcCCChHHHHHHHHHh
Q 045570 423 SAVRCLMDGENKIRKKVKEMAEISRKSLMEGGSSFNSIGQFISL 466 (468)
Q Consensus 423 ~av~~vl~~~~~~~~~a~~l~~~~~~~~~~gg~~~~~~~~~~~~ 466 (468)
+++.+++. |++.+++..+-+.... ..-+.....+++++.
T Consensus 324 ~~i~~l~~-~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~ 362 (364)
T cd03814 324 AALAALLA-DPELRRRMAARARAEA----ERRSWEAFLDNLLEA 362 (364)
T ss_pred HHHHHHHc-CHHHHHHHHHHHHHHH----hhcCHHHHHHHHHHh
Confidence 99999998 6665554443333322 134545556666554
No 46
>cd03823 GT1_ExpE7_like This family is most closely related to the GT1 family of glycosyltransferases. ExpE7 in Sinorhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucans (exopolysaccharide II).
Probab=98.99 E-value=1.3e-06 Score=84.85 Aligned_cols=86 Identities=24% Similarity=0.176 Sum_probs=61.9
Q ss_pred cCCeEEEEeccHHH---hhhccccceeee----ccCc-hhHHHHHhcCCcEEeccCccccchhHHHHHhhhceEEEeeec
Q 045570 337 KGRGMIWGWVPQVE---ILAHKAIGGFVS----HCGW-NSILESLWYGVPIATWPIYAEQQLNAFRMVKELGLALDLRLD 408 (468)
Q Consensus 337 ~~~~~v~~~vpq~~---iL~~~~~~~~i~----HgG~-~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~G~G~~~~~~ 408 (468)
..++.+.+|+++.+ ++..+++ +|. ..|+ .++.||+++|+|+|+.+.. .+...+.+. +.|..+.
T Consensus 242 ~~~v~~~g~~~~~~~~~~~~~ad~--~i~ps~~~e~~~~~~~Ea~a~G~Pvi~~~~~----~~~e~i~~~-~~g~~~~-- 312 (359)
T cd03823 242 DPRVEFLGAYPQEEIDDFYAEIDV--LVVPSIWPENFPLVIREALAAGVPVIASDIG----GMAELVRDG-VNGLLFP-- 312 (359)
T ss_pred CCeEEEeCCCCHHHHHHHHHhCCE--EEEcCcccCCCChHHHHHHHCCCCEEECCCC----CHHHHhcCC-CcEEEEC--
Confidence 46788889997665 5888888 663 2333 4799999999999987653 455555543 5787766
Q ss_pred cccCCcccChhHHHHHHHHHhcCcHHHHHH
Q 045570 409 YRVGSDLVMAGDIESAVRCLMDGENKIRKK 438 (468)
Q Consensus 409 ~~~~~~~~~~~~l~~av~~vl~~~~~~~~~ 438 (468)
.-+.+++.+++.++++ |+..++.
T Consensus 313 ------~~d~~~l~~~i~~l~~-~~~~~~~ 335 (359)
T cd03823 313 ------PGDAEDLAAALERLID-DPDLLER 335 (359)
T ss_pred ------CCCHHHHHHHHHHHHh-ChHHHHH
Confidence 3368999999999998 6654443
No 47
>PLN02871 UDP-sulfoquinovose:DAG sulfoquinovosyltransferase
Probab=98.97 E-value=1.9e-06 Score=87.44 Aligned_cols=131 Identities=15% Similarity=0.144 Sum_probs=81.3
Q ss_pred EEEEeccCccccCHHHHHHHHHHHHhC-CCcEEEEEecCCCCCccccccccCCCCCCchhHHHHh-cCCeEEEEeccHHH
Q 045570 273 VVFLCFGSSGSFDVAQVKEIAIGLERS-GYNFLWSLRVSSPKDEVSAHRYVTNNGVFPEGFLERI-KGRGMIWGWVPQVE 350 (468)
Q Consensus 273 vv~vs~GS~~~~~~~~~~~~~~al~~~-~~~~iw~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~-~~~~~v~~~vpq~~ 350 (468)
.+++..|++.. ...+..++++++.. +.+++++ |.+. ..+.+.+.. ..++.+.+|+|+.+
T Consensus 264 ~~i~~vGrl~~--~K~~~~li~a~~~~~~~~l~iv-G~G~----------------~~~~l~~~~~~~~V~f~G~v~~~e 324 (465)
T PLN02871 264 PLIVYVGRLGA--EKNLDFLKRVMERLPGARLAFV-GDGP----------------YREELEKMFAGTPTVFTGMLQGDE 324 (465)
T ss_pred eEEEEeCCCch--hhhHHHHHHHHHhCCCcEEEEE-eCCh----------------HHHHHHHHhccCCeEEeccCCHHH
Confidence 45555677542 22355577777664 4555544 4321 111222211 24678889998655
Q ss_pred ---hhhccccceeeeccC----chhHHHHHhcCCcEEeccCccccchhHHHHHh---hhceEEEeeeccccCCcccChhH
Q 045570 351 ---ILAHKAIGGFVSHCG----WNSILESLWYGVPIATWPIYAEQQLNAFRMVK---ELGLALDLRLDYRVGSDLVMAGD 420 (468)
Q Consensus 351 ---iL~~~~~~~~i~HgG----~~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~---~~G~G~~~~~~~~~~~~~~~~~~ 420 (468)
++..+++ ||.-.. -++++||+++|+|+|+....+ ....+.+ . +.|..++ .-+.++
T Consensus 325 v~~~~~~aDv--~V~pS~~E~~g~~vlEAmA~G~PVI~s~~gg----~~eiv~~~~~~-~~G~lv~--------~~d~~~ 389 (465)
T PLN02871 325 LSQAYASGDV--FVMPSESETLGFVVLEAMASGVPVVAARAGG----IPDIIPPDQEG-KTGFLYT--------PGDVDD 389 (465)
T ss_pred HHHHHHHCCE--EEECCcccccCcHHHHHHHcCCCEEEcCCCC----cHhhhhcCCCC-CceEEeC--------CCCHHH
Confidence 7788888 775432 347899999999999876532 2223333 4 6787765 347899
Q ss_pred HHHHHHHHhcCcHHHHHH
Q 045570 421 IESAVRCLMDGENKIRKK 438 (468)
Q Consensus 421 l~~av~~vl~~~~~~~~~ 438 (468)
+.++|.++++ |++.+++
T Consensus 390 la~~i~~ll~-~~~~~~~ 406 (465)
T PLN02871 390 CVEKLETLLA-DPELRER 406 (465)
T ss_pred HHHHHHHHHh-CHHHHHH
Confidence 9999999998 6654443
No 48
>cd03800 GT1_Sucrose_synthase This family is most closely related to the GT1 family of glycosyltransferases. The sucrose-phosphate synthases in this family may be unique to plants and photosynthetic bacteria. This enzyme catalyzes the synthesis of sucrose 6-phosphate from fructose 6-phosphate and uridine 5'-diphosphate-glucose, a key regulatory step of sucrose metabolism. The activity of this enzyme is regulated by phosphorylation and moderated by the concentration of various metabolites and light.
Probab=98.96 E-value=2e-06 Score=85.22 Aligned_cols=84 Identities=18% Similarity=0.202 Sum_probs=61.8
Q ss_pred CCeEEEEeccHHH---hhhccccceeeecc---C-chhHHHHHhcCCcEEeccCccccchhHHHHHhhhceEEEeeeccc
Q 045570 338 GRGMIWGWVPQVE---ILAHKAIGGFVSHC---G-WNSILESLWYGVPIATWPIYAEQQLNAFRMVKELGLALDLRLDYR 410 (468)
Q Consensus 338 ~~~~v~~~vpq~~---iL~~~~~~~~i~Hg---G-~~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~G~G~~~~~~~~ 410 (468)
+++.+.+|+|+.+ ++..+++ ++... | -.++.||+++|+|+|+-...+ ....+.+. +.|..++
T Consensus 283 ~~v~~~g~~~~~~~~~~~~~adi--~l~ps~~e~~~~~l~Ea~a~G~Pvi~s~~~~----~~e~i~~~-~~g~~~~---- 351 (398)
T cd03800 283 DRVDFPGRVSREDLPALYRAADV--FVNPALYEPFGLTALEAMACGLPVVATAVGG----PRDIVVDG-VTGLLVD---- 351 (398)
T ss_pred ceEEEeccCCHHHHHHHHHhCCE--EEecccccccCcHHHHHHhcCCCEEECCCCC----HHHHccCC-CCeEEeC----
Confidence 5788889999876 4788888 77432 2 358999999999999876543 44444444 6788765
Q ss_pred cCCcccChhHHHHHHHHHhcCcHHHHH
Q 045570 411 VGSDLVMAGDIESAVRCLMDGENKIRK 437 (468)
Q Consensus 411 ~~~~~~~~~~l~~av~~vl~~~~~~~~ 437 (468)
.-+.+++.++|.++++ +++.++
T Consensus 352 ----~~~~~~l~~~i~~l~~-~~~~~~ 373 (398)
T cd03800 352 ----PRDPEALAAALRRLLT-DPALRR 373 (398)
T ss_pred ----CCCHHHHHHHHHHHHh-CHHHHH
Confidence 4478999999999998 554443
No 49
>PRK05749 3-deoxy-D-manno-octulosonic-acid transferase; Reviewed
Probab=98.95 E-value=3.6e-06 Score=84.43 Aligned_cols=87 Identities=21% Similarity=0.214 Sum_probs=61.7
Q ss_pred CeEEEEeccH-HHhhhccccceeeec-----cCchhHHHHHhcCCcEEeccCccccchhHHHHHhhhceEEEeeeccccC
Q 045570 339 RGMIWGWVPQ-VEILAHKAIGGFVSH-----CGWNSILESLWYGVPIATWPIYAEQQLNAFRMVKELGLALDLRLDYRVG 412 (468)
Q Consensus 339 ~~~v~~~vpq-~~iL~~~~~~~~i~H-----gG~~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~G~G~~~~~~~~~~ 412 (468)
++.+.+...+ ..++..+++ ++.. +|..+++||+++|+|+|+-|..+++......+.+. |+++...
T Consensus 303 ~v~l~~~~~el~~~y~~aDi--~~v~~S~~e~~g~~~lEAma~G~PVI~g~~~~~~~e~~~~~~~~-g~~~~~~------ 373 (425)
T PRK05749 303 DVLLGDTMGELGLLYAIADI--AFVGGSLVKRGGHNPLEPAAFGVPVISGPHTFNFKEIFERLLQA-GAAIQVE------ 373 (425)
T ss_pred cEEEEecHHHHHHHHHhCCE--EEECCCcCCCCCCCHHHHHHhCCCEEECCCccCHHHHHHHHHHC-CCeEEEC------
Confidence 3444454333 347788887 4331 34446999999999999999988888877766565 7666533
Q ss_pred CcccChhHHHHHHHHHhcCcHHHHHHH
Q 045570 413 SDLVMAGDIESAVRCLMDGENKIRKKV 439 (468)
Q Consensus 413 ~~~~~~~~l~~av~~vl~~~~~~~~~a 439 (468)
+.+++.+++.++++ |+..+++.
T Consensus 374 ----d~~~La~~l~~ll~-~~~~~~~m 395 (425)
T PRK05749 374 ----DAEDLAKAVTYLLT-DPDARQAY 395 (425)
T ss_pred ----CHHHHHHHHHHHhc-CHHHHHHH
Confidence 67999999999998 66555443
No 50
>cd03794 GT1_wbuB_like This family is most closely related to the GT1 family of glycosyltransferases. wbuB in E. coli is involved in the biosynthesis of the O26 O-antigen. It has been proposed to function as an N-acetyl-L-fucosamine (L-FucNAc) transferase.
Probab=98.90 E-value=9.7e-07 Score=86.52 Aligned_cols=140 Identities=19% Similarity=0.145 Sum_probs=83.9
Q ss_pred CcEEEEeccCccc-cCHHHHHHHHHHHHhC-CCcEEEEEecCCCCCccccccccCCCCCCchhHHHHhcCCeEEEEeccH
Q 045570 271 SSVVFLCFGSSGS-FDVAQVKEIAIGLERS-GYNFLWSLRVSSPKDEVSAHRYVTNNGVFPEGFLERIKGRGMIWGWVPQ 348 (468)
Q Consensus 271 ~~vv~vs~GS~~~-~~~~~~~~~~~al~~~-~~~~iw~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~v~~~vpq 348 (468)
++.+++..|+... ...+.+.++++.+... +.++++ +|.+.. ...+.+........++.+.+++++
T Consensus 219 ~~~~i~~~G~~~~~k~~~~l~~~~~~l~~~~~~~l~i-~G~~~~------------~~~~~~~~~~~~~~~v~~~g~~~~ 285 (394)
T cd03794 219 DKFVVLYAGNIGRAQGLDTLLEAAALLKDRPDIRFLI-VGDGPE------------KEELKELAKALGLDNVTFLGRVPK 285 (394)
T ss_pred CcEEEEEecCcccccCHHHHHHHHHHHhhcCCeEEEE-eCCccc------------HHHHHHHHHHcCCCcEEEeCCCCh
Confidence 3467777888653 3334455555554443 455544 343210 000111011123357888899986
Q ss_pred HH---hhhccccceeeeccC---------chhHHHHHhcCCcEEeccCccccchhHHHHHhhhceEEEeeeccccCCccc
Q 045570 349 VE---ILAHKAIGGFVSHCG---------WNSILESLWYGVPIATWPIYAEQQLNAFRMVKELGLALDLRLDYRVGSDLV 416 (468)
Q Consensus 349 ~~---iL~~~~~~~~i~HgG---------~~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~G~G~~~~~~~~~~~~~~ 416 (468)
.+ ++..+++ +|.... -+++.||+++|+|+|+.+..+.+.... +. +.|..++ .-
T Consensus 286 ~~~~~~~~~~di--~i~~~~~~~~~~~~~p~~~~Ea~~~G~pvi~~~~~~~~~~~~----~~-~~g~~~~--------~~ 350 (394)
T cd03794 286 EELPELLAAADV--GLVPLKPGPAFEGVSPSKLFEYMAAGKPVLASVDGESAELVE----EA-GAGLVVP--------PG 350 (394)
T ss_pred HHHHHHHHhhCe--eEEeccCcccccccCchHHHHHHHCCCcEEEecCCCchhhhc----cC-CcceEeC--------CC
Confidence 65 6778888 664322 234799999999999998876544332 32 5666665 33
Q ss_pred ChhHHHHHHHHHhcCcHHHHHHH
Q 045570 417 MAGDIESAVRCLMDGENKIRKKV 439 (468)
Q Consensus 417 ~~~~l~~av~~vl~~~~~~~~~a 439 (468)
+.+++.+++.++++ |++.+++.
T Consensus 351 ~~~~l~~~i~~~~~-~~~~~~~~ 372 (394)
T cd03794 351 DPEALAAAILELLD-DPEERAEM 372 (394)
T ss_pred CHHHHHHHHHHHHh-ChHHHHHH
Confidence 78999999999997 66544443
No 51
>cd03817 GT1_UGDG_like This family is most closely related to the GT1 family of glycosyltransferases. UDP-glucose-diacylglycerol glucosyltransferase (UGDG; also known as 1,2-diacylglycerol 3-glucosyltransferase) catalyzes the transfer of glucose from UDP-glucose to 1,2-diacylglycerol forming 3-D-glucosyl-1,2-diacylglycerol.
Probab=98.87 E-value=1.5e-05 Score=77.56 Aligned_cols=81 Identities=16% Similarity=0.149 Sum_probs=58.4
Q ss_pred cCCeEEEEeccHHH---hhhccccceeeecc----CchhHHHHHhcCCcEEeccCccccchhHHHHHhhhceEEEeeecc
Q 045570 337 KGRGMIWGWVPQVE---ILAHKAIGGFVSHC----GWNSILESLWYGVPIATWPIYAEQQLNAFRMVKELGLALDLRLDY 409 (468)
Q Consensus 337 ~~~~~v~~~vpq~~---iL~~~~~~~~i~Hg----G~~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~G~G~~~~~~~ 409 (468)
.+++.+.+++|+.+ ++.++++ +|..+ ..+++.||+++|+|+|+... ...+..+.+. +.|..++.
T Consensus 258 ~~~v~~~g~~~~~~~~~~~~~ad~--~l~~s~~e~~~~~~~Ea~~~g~PvI~~~~----~~~~~~i~~~-~~g~~~~~-- 328 (374)
T cd03817 258 ADRVIFTGFVPREELPDYYKAADL--FVFASTTETQGLVLLEAMAAGLPVVAVDA----PGLPDLVADG-ENGFLFPP-- 328 (374)
T ss_pred CCcEEEeccCChHHHHHHHHHcCE--EEecccccCcChHHHHHHHcCCcEEEeCC----CChhhheecC-ceeEEeCC--
Confidence 45788889999765 6788888 66433 34789999999999998754 3344454444 67776652
Q ss_pred ccCCcccChhHHHHHHHHHhcCcHH
Q 045570 410 RVGSDLVMAGDIESAVRCLMDGENK 434 (468)
Q Consensus 410 ~~~~~~~~~~~l~~av~~vl~~~~~ 434 (468)
-+. ++.+++.++++ +++
T Consensus 329 ------~~~-~~~~~i~~l~~-~~~ 345 (374)
T cd03817 329 ------GDE-ALAEALLRLLQ-DPE 345 (374)
T ss_pred ------CCH-HHHHHHHHHHh-ChH
Confidence 122 89999999998 554
No 52
>cd03801 GT1_YqgM_like This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold.
Probab=98.85 E-value=1.7e-05 Score=76.72 Aligned_cols=111 Identities=17% Similarity=0.152 Sum_probs=72.9
Q ss_pred hcCCeEEEEeccHHH---hhhccccceeee----ccCchhHHHHHhcCCcEEeccCccccchhHHHHHhhhceEEEeeec
Q 045570 336 IKGRGMIWGWVPQVE---ILAHKAIGGFVS----HCGWNSILESLWYGVPIATWPIYAEQQLNAFRMVKELGLALDLRLD 408 (468)
Q Consensus 336 ~~~~~~v~~~vpq~~---iL~~~~~~~~i~----HgG~~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~G~G~~~~~~ 408 (468)
...++.+.+++++.+ ++..+++ +|. -|..+++.||+++|+|+|+.+. ......+.+. +.|..++
T Consensus 254 ~~~~v~~~g~~~~~~~~~~~~~~di--~i~~~~~~~~~~~~~Ea~~~g~pvI~~~~----~~~~~~~~~~-~~g~~~~-- 324 (374)
T cd03801 254 LGDRVTFLGFVPDEDLPALYAAADV--FVLPSLYEGFGLVLLEAMAAGLPVVASDV----GGIPEVVEDG-ETGLLVP-- 324 (374)
T ss_pred CCcceEEEeccChhhHHHHHHhcCE--EEecchhccccchHHHHHHcCCcEEEeCC----CChhHHhcCC-cceEEeC--
Confidence 346788889997554 6788888 663 2456789999999999998765 3445454444 6777666
Q ss_pred cccCCcccChhHHHHHHHHHhcCcHHHHHHHHHHHH-HHHHhhhcCCChHHHHHHHHHh
Q 045570 409 YRVGSDLVMAGDIESAVRCLMDGENKIRKKVKEMAE-ISRKSLMEGGSSFNSIGQFISL 466 (468)
Q Consensus 409 ~~~~~~~~~~~~l~~av~~vl~~~~~~~~~a~~l~~-~~~~~~~~gg~~~~~~~~~~~~ 466 (468)
..+.+++.+++.++++ ++..++...+-+. .+.+ .-+-....+++++.
T Consensus 325 ------~~~~~~l~~~i~~~~~-~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~ 372 (374)
T cd03801 325 ------PGDPEALAEAILRLLD-DPELRRRLGEAARERVAE----RFSWDRVAARTEEV 372 (374)
T ss_pred ------CCCHHHHHHHHHHHHc-ChHHHHHHHHHHHHHHHH----hcCHHHHHHHHHHh
Confidence 4468999999999998 6654443332222 2222 34444455555543
No 53
>cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases. ExpC in Rhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucan (exopolysaccharide II).
Probab=98.84 E-value=2.9e-05 Score=77.14 Aligned_cols=87 Identities=17% Similarity=0.155 Sum_probs=60.1
Q ss_pred CCeEEEEeccHHH---hhhccccceeee-ccCc-hhHHHHHhcCCcEEeccCccccchhHHHHHhhhceEEEeeeccccC
Q 045570 338 GRGMIWGWVPQVE---ILAHKAIGGFVS-HCGW-NSILESLWYGVPIATWPIYAEQQLNAFRMVKELGLALDLRLDYRVG 412 (468)
Q Consensus 338 ~~~~v~~~vpq~~---iL~~~~~~~~i~-HgG~-~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~G~G~~~~~~~~~~ 412 (468)
+++.+.+++|+.+ +|..+++-++.+ +.|. .++.||+++|+|+|+... ......+... ..|..++
T Consensus 281 ~~V~f~G~v~~~~~~~~l~~adv~v~~s~~e~~~~~llEAmA~G~PVIas~~----~g~~e~i~~~-~~G~lv~------ 349 (396)
T cd03818 281 SRVHFLGRVPYDQYLALLQVSDVHVYLTYPFVLSWSLLEAMACGCLVVGSDT----APVREVITDG-ENGLLVD------ 349 (396)
T ss_pred ceEEEeCCCCHHHHHHHHHhCcEEEEcCcccccchHHHHHHHCCCCEEEcCC----CCchhhcccC-CceEEcC------
Confidence 5788889999776 567888822222 2232 489999999999998644 3444444443 4677665
Q ss_pred CcccChhHHHHHHHHHhcCcHHHHHH
Q 045570 413 SDLVMAGDIESAVRCLMDGENKIRKK 438 (468)
Q Consensus 413 ~~~~~~~~l~~av~~vl~~~~~~~~~ 438 (468)
.-+.+++.++|.++++ |++.+++
T Consensus 350 --~~d~~~la~~i~~ll~-~~~~~~~ 372 (396)
T cd03818 350 --FFDPDALAAAVIELLD-DPARRAR 372 (396)
T ss_pred --CCCHHHHHHHHHHHHh-CHHHHHH
Confidence 4478999999999998 6654433
No 54
>cd03808 GT1_cap1E_like This family is most closely related to the GT1 family of glycosyltransferases. cap1E in Streptococcus pneumoniae is required for the synthesis of type 1 capsular polysaccharides.
Probab=98.79 E-value=2.2e-05 Score=75.78 Aligned_cols=139 Identities=17% Similarity=0.153 Sum_probs=81.9
Q ss_pred CcEEEEeccCccc-cCHHHHHHHHHHHHh--CCCcEEEEEecCCCCCccccccccCCCCCCchh-HHH-HhcCCeEEEEe
Q 045570 271 SSVVFLCFGSSGS-FDVAQVKEIAIGLER--SGYNFLWSLRVSSPKDEVSAHRYVTNNGVFPEG-FLE-RIKGRGMIWGW 345 (468)
Q Consensus 271 ~~vv~vs~GS~~~-~~~~~~~~~~~al~~--~~~~~iw~~~~~~~~~~~~~~~~~~~~~~lp~~-~~~-~~~~~~~v~~~ 345 (468)
++.+++..|++.. ...+.+.++++.+.+ .+.++++. |.... . ...... ..+ ....++.+.++
T Consensus 187 ~~~~i~~~G~~~~~k~~~~li~~~~~l~~~~~~~~l~i~-G~~~~-~-----------~~~~~~~~~~~~~~~~v~~~g~ 253 (359)
T cd03808 187 DDPVFLFVARLLKDKGIDELLEAARILKAKGPNVRLLLV-GDGDE-E-----------NPAAILEIEKLGLEGRVEFLGF 253 (359)
T ss_pred CCcEEEEEeccccccCHHHHHHHHHHHHhcCCCeEEEEE-cCCCc-c-----------hhhHHHHHHhcCCcceEEEeec
Confidence 3477788888653 334445555555543 34454444 33211 0 000000 000 12346777776
Q ss_pred cc-HHHhhhccccceeeeccC----chhHHHHHhcCCcEEeccCccccchhHHHHHhhhceEEEeeeccccCCcccChhH
Q 045570 346 VP-QVEILAHKAIGGFVSHCG----WNSILESLWYGVPIATWPIYAEQQLNAFRMVKELGLALDLRLDYRVGSDLVMAGD 420 (468)
Q Consensus 346 vp-q~~iL~~~~~~~~i~HgG----~~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~G~G~~~~~~~~~~~~~~~~~~ 420 (468)
.. -..++..+++ +|.-.. .+++.||+.+|+|+|+-+..+ +...+.+. +.|..++ .-+.++
T Consensus 254 ~~~~~~~~~~adi--~i~ps~~e~~~~~~~Ea~~~G~Pvi~s~~~~----~~~~i~~~-~~g~~~~--------~~~~~~ 318 (359)
T cd03808 254 RDDVPELLAAADV--FVLPSYREGLPRVLLEAMAMGRPVIATDVPG----CREAVIDG-VNGFLVP--------PGDAEA 318 (359)
T ss_pred cccHHHHHHhccE--EEecCcccCcchHHHHHHHcCCCEEEecCCC----chhhhhcC-cceEEEC--------CCCHHH
Confidence 44 3448888988 665433 578999999999999975543 33444444 6777665 447899
Q ss_pred HHHHHHHHhcCcHHHHHH
Q 045570 421 IESAVRCLMDGENKIRKK 438 (468)
Q Consensus 421 l~~av~~vl~~~~~~~~~ 438 (468)
+.+++.+++. |++.+++
T Consensus 319 ~~~~i~~l~~-~~~~~~~ 335 (359)
T cd03808 319 LADAIERLIE-DPELRAR 335 (359)
T ss_pred HHHHHHHHHh-CHHHHHH
Confidence 9999999988 5544443
No 55
>PRK10307 putative glycosyl transferase; Provisional
Probab=98.76 E-value=6.9e-05 Score=74.81 Aligned_cols=85 Identities=12% Similarity=0.064 Sum_probs=58.2
Q ss_pred CCeEEEEeccHHH---hhhccccceeeeccCc------hhHHHHHhcCCcEEeccCccccchhHHHHHhhhceEEEeeec
Q 045570 338 GRGMIWGWVPQVE---ILAHKAIGGFVSHCGW------NSILESLWYGVPIATWPIYAEQQLNAFRMVKELGLALDLRLD 408 (468)
Q Consensus 338 ~~~~v~~~vpq~~---iL~~~~~~~~i~HgG~------~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~G~G~~~~~~ 408 (468)
.++.+.+|+|+.+ ++..+++.++.+..+. +.+.|++.+|+|+|+....+.. .... .+ +.|+.++
T Consensus 284 ~~v~f~G~~~~~~~~~~~~~aDi~v~ps~~e~~~~~~p~kl~eama~G~PVi~s~~~g~~--~~~~-i~--~~G~~~~-- 356 (412)
T PRK10307 284 PNVHFLPLQPYDRLPALLKMADCHLLPQKAGAADLVLPSKLTNMLASGRNVVATAEPGTE--LGQL-VE--GIGVCVE-- 356 (412)
T ss_pred CceEEeCCCCHHHHHHHHHhcCEeEEeeccCcccccCcHHHHHHHHcCCCEEEEeCCCch--HHHH-Hh--CCcEEeC--
Confidence 4788889998765 6888888545444332 2468999999999998754321 1112 22 5677665
Q ss_pred cccCCcccChhHHHHHHHHHhcCcHHHH
Q 045570 409 YRVGSDLVMAGDIESAVRCLMDGENKIR 436 (468)
Q Consensus 409 ~~~~~~~~~~~~l~~av~~vl~~~~~~~ 436 (468)
.-+.++++++|.++++ |+..+
T Consensus 357 ------~~d~~~la~~i~~l~~-~~~~~ 377 (412)
T PRK10307 357 ------PESVEALVAAIAALAR-QALLR 377 (412)
T ss_pred ------CCCHHHHHHHHHHHHh-CHHHH
Confidence 4478999999999998 55433
No 56
>cd04962 GT1_like_5 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=98.75 E-value=4.9e-05 Score=74.50 Aligned_cols=86 Identities=12% Similarity=0.094 Sum_probs=59.7
Q ss_pred cCCeEEEEeccH-HHhhhccccceeeec----cCchhHHHHHhcCCcEEeccCccccchhHHHHHhhhceEEEeeecccc
Q 045570 337 KGRGMIWGWVPQ-VEILAHKAIGGFVSH----CGWNSILESLWYGVPIATWPIYAEQQLNAFRMVKELGLALDLRLDYRV 411 (468)
Q Consensus 337 ~~~~~v~~~vpq-~~iL~~~~~~~~i~H----gG~~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~G~G~~~~~~~~~ 411 (468)
.+++.+.++.++ ..++..+++ +|.- |.-.++.||+++|+|+|+.... .....+.+. ..|..++
T Consensus 252 ~~~v~~~g~~~~~~~~~~~~d~--~v~ps~~E~~~~~~~EAma~g~PvI~s~~~----~~~e~i~~~-~~G~~~~----- 319 (371)
T cd04962 252 QDDVLFLGKQDHVEELLSIADL--FLLPSEKESFGLAALEAMACGVPVVASNAG----GIPEVVKHG-ETGFLVD----- 319 (371)
T ss_pred CceEEEecCcccHHHHHHhcCE--EEeCCCcCCCccHHHHHHHcCCCEEEeCCC----CchhhhcCC-CceEEcC-----
Confidence 356777787764 348888888 6632 3345999999999999996543 445444443 5676655
Q ss_pred CCcccChhHHHHHHHHHhcCcHHHHHH
Q 045570 412 GSDLVMAGDIESAVRCLMDGENKIRKK 438 (468)
Q Consensus 412 ~~~~~~~~~l~~av~~vl~~~~~~~~~ 438 (468)
.-+.+++.+++.++++ ++..+++
T Consensus 320 ---~~~~~~l~~~i~~l~~-~~~~~~~ 342 (371)
T cd04962 320 ---VGDVEAMAEYALSLLE-DDELWQE 342 (371)
T ss_pred ---CCCHHHHHHHHHHHHh-CHHHHHH
Confidence 3478999999999998 6644333
No 57
>cd03816 GT1_ALG1_like This family is most closely related to the GT1 family of glycosyltransferases. The yeast gene ALG1 has been shown to function as a mannosyltransferase that catalyzes the formation of dolichol pyrophosphate (Dol-PP)-GlcNAc2Man from GDP-Man and Dol-PP-Glc-NAc2, and participates in the formation of the lipid-linked precursor oligosaccharide for N-glycosylation. In humans ALG1 has been associated with the congenital disorders of glycosylation (CDG) designated as subtype CDG-Ik.
Probab=98.72 E-value=6.4e-05 Score=75.06 Aligned_cols=76 Identities=16% Similarity=0.237 Sum_probs=53.1
Q ss_pred CeEEE-EeccHHH---hhhccccceeee-c---cC---chhHHHHHhcCCcEEeccCccccchhHHHHHhhhceEEEeee
Q 045570 339 RGMIW-GWVPQVE---ILAHKAIGGFVS-H---CG---WNSILESLWYGVPIATWPIYAEQQLNAFRMVKELGLALDLRL 407 (468)
Q Consensus 339 ~~~v~-~~vpq~~---iL~~~~~~~~i~-H---gG---~~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~G~G~~~~~ 407 (468)
++.+. +|+|..+ +|..+++ +|. + -| -++++||+++|+|+|+... ......+.+. +.|..+.
T Consensus 295 ~~~~~~g~~~~~~~~~~l~~aDv--~v~~~~~~~~~~~p~~~~Eama~G~PVI~s~~----~~~~eiv~~~-~~G~lv~- 366 (415)
T cd03816 295 KVTIRTPWLSAEDYPKLLASADL--GVSLHTSSSGLDLPMKVVDMFGCGLPVCALDF----KCIDELVKHG-ENGLVFG- 366 (415)
T ss_pred cEEEEcCcCCHHHHHHHHHhCCE--EEEccccccccCCcHHHHHHHHcCCCEEEeCC----CCHHHHhcCC-CCEEEEC-
Confidence 44444 6888655 5778898 663 1 12 3479999999999999654 2344444444 6787653
Q ss_pred ccccCCcccChhHHHHHHHHHhcCc
Q 045570 408 DYRVGSDLVMAGDIESAVRCLMDGE 432 (468)
Q Consensus 408 ~~~~~~~~~~~~~l~~av~~vl~~~ 432 (468)
+.+++.++|.++++ |
T Consensus 367 ---------d~~~la~~i~~ll~-~ 381 (415)
T cd03816 367 ---------DSEELAEQLIDLLS-N 381 (415)
T ss_pred ---------CHHHHHHHHHHHHh-c
Confidence 68999999999998 5
No 58
>TIGR00236 wecB UDP-N-acetylglucosamine 2-epimerase. Epimerase activity was also demonstrated in a bifunctional rat enzyme, for which the N-terminal domain appears to be orthologous. The set of proteins found above the suggested cutoff includes E. coli WecB in one of two deeply branched clusters and the rat UDP-N-acetylglucosamine 2-epimerase domain in the other.
Probab=98.70 E-value=8.6e-06 Score=79.91 Aligned_cols=106 Identities=15% Similarity=0.160 Sum_probs=73.3
Q ss_pred CCeEEEEeccH---HHhhhccccceeeeccCchhHHHHHhcCCcEEeccCccccchhHHHHHhhhceEEEeeeccccCCc
Q 045570 338 GRGMIWGWVPQ---VEILAHKAIGGFVSHCGWNSILESLWYGVPIATWPIYAEQQLNAFRMVKELGLALDLRLDYRVGSD 414 (468)
Q Consensus 338 ~~~~v~~~vpq---~~iL~~~~~~~~i~HgG~~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~G~G~~~~~~~~~~~~ 414 (468)
+++.+.+.+++ ..++.++++ +|+-.|. .+.||+++|+|+|..+-.++++. +.+. |.++.+.
T Consensus 255 ~~v~~~~~~~~~~~~~~l~~ad~--vv~~Sg~-~~~EA~a~g~PvI~~~~~~~~~e----~~~~-g~~~lv~-------- 318 (365)
T TIGR00236 255 KRVHLIEPLEYLDFLNLAANSHL--ILTDSGG-VQEEAPSLGKPVLVLRDTTERPE----TVEA-GTNKLVG-------- 318 (365)
T ss_pred CCEEEECCCChHHHHHHHHhCCE--EEECChh-HHHHHHHcCCCEEECCCCCCChH----HHhc-CceEEeC--------
Confidence 47888766554 456778887 8987764 47999999999999976666553 2334 7665443
Q ss_pred ccChhHHHHHHHHHhcCcHHHHHHHHHHHHHHHHhhhcCCChHHHHHHHHH
Q 045570 415 LVMAGDIESAVRCLMDGENKIRKKVKEMAEISRKSLMEGGSSFNSIGQFIS 465 (468)
Q Consensus 415 ~~~~~~l~~av~~vl~~~~~~~~~a~~l~~~~~~~~~~gg~~~~~~~~~~~ 465 (468)
.++++|.+++.++++ |+..+++...-. . ...+|+++.+-++.+.+
T Consensus 319 -~d~~~i~~ai~~ll~-~~~~~~~~~~~~---~-~~g~~~a~~ri~~~l~~ 363 (365)
T TIGR00236 319 -TDKENITKAAKRLLT-DPDEYKKMSNAS---N-PYGDGEASERIVEELLN 363 (365)
T ss_pred -CCHHHHHHHHHHHHh-ChHHHHHhhhcC---C-CCcCchHHHHHHHHHHh
Confidence 278899999999998 676665543322 2 23457777776666654
No 59
>cd03820 GT1_amsD_like This family is most closely related to the GT1 family of glycosyltransferases. AmSD in Erwinia amylovora has been shown to be involved in the biosynthesis of amylovoran, the acidic exopolysaccharide acting as a virulence factor. This enzyme may be responsible for the formation of galactose alpha-1,6 linkages in amylovoran.
Probab=98.70 E-value=4.8e-05 Score=73.08 Aligned_cols=90 Identities=21% Similarity=0.345 Sum_probs=62.1
Q ss_pred CCeEEEEecc-HHHhhhccccceeeeccC----chhHHHHHhcCCcEEeccCccccchhHHHHHhhhc-eEEEeeecccc
Q 045570 338 GRGMIWGWVP-QVEILAHKAIGGFVSHCG----WNSILESLWYGVPIATWPIYAEQQLNAFRMVKELG-LALDLRLDYRV 411 (468)
Q Consensus 338 ~~~~v~~~vp-q~~iL~~~~~~~~i~HgG----~~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~G-~G~~~~~~~~~ 411 (468)
.++.+.++.. -..++..+++ +|.-.. -+++.||+++|+|+|+.+..+.+. .+.+. | .|..++
T Consensus 235 ~~v~~~g~~~~~~~~~~~ad~--~i~ps~~e~~~~~~~Ea~a~G~Pvi~~~~~~~~~----~~~~~-~~~g~~~~----- 302 (348)
T cd03820 235 DRVILLGFTKNIEEYYAKASI--FVLTSRFEGFPMVLLEAMAFGLPVISFDCPTGPS----EIIED-GVNGLLVP----- 302 (348)
T ss_pred CeEEEcCCcchHHHHHHhCCE--EEeCccccccCHHHHHHHHcCCCEEEecCCCchH----hhhcc-CcceEEeC-----
Confidence 4566666633 3458888888 665542 468999999999999876554433 33344 4 777665
Q ss_pred CCcccChhHHHHHHHHHhcCcHHHHHHHHHHH
Q 045570 412 GSDLVMAGDIESAVRCLMDGENKIRKKVKEMA 443 (468)
Q Consensus 412 ~~~~~~~~~l~~av~~vl~~~~~~~~~a~~l~ 443 (468)
..+.+++.+++.++++ |++.+++..+-+
T Consensus 303 ---~~~~~~~~~~i~~ll~-~~~~~~~~~~~~ 330 (348)
T cd03820 303 ---NGDVEALAEALLRLME-DEELRKRMGANA 330 (348)
T ss_pred ---CCCHHHHHHHHHHHHc-CHHHHHHHHHHH
Confidence 4468999999999998 776665554443
No 60
>COG3980 spsG Spore coat polysaccharide biosynthesis protein, predicted glycosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=98.68 E-value=1.2e-05 Score=72.25 Aligned_cols=141 Identities=16% Similarity=0.166 Sum_probs=98.6
Q ss_pred cEEEEeccCccccCHHHHHHHHHHHHhCCCcEEEEEecCCCCCccccccccCCCCCCchhHHHH--hcCCeEEEEecc-H
Q 045570 272 SVVFLCFGSSGSFDVAQVKEIAIGLERSGYNFLWSLRVSSPKDEVSAHRYVTNNGVFPEGFLER--IKGRGMIWGWVP-Q 348 (468)
Q Consensus 272 ~vv~vs~GS~~~~~~~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~--~~~~~~v~~~vp-q 348 (468)
.-|+|++|- +......-+++..|.+.++.+=+++|...+ .+.++..+ ..++..+..... -
T Consensus 159 r~ilI~lGG--sDpk~lt~kvl~~L~~~~~nl~iV~gs~~p---------------~l~~l~k~~~~~~~i~~~~~~~dm 221 (318)
T COG3980 159 RDILITLGG--SDPKNLTLKVLAELEQKNVNLHIVVGSSNP---------------TLKNLRKRAEKYPNINLYIDTNDM 221 (318)
T ss_pred heEEEEccC--CChhhhHHHHHHHhhccCeeEEEEecCCCc---------------chhHHHHHHhhCCCeeeEecchhH
Confidence 368999886 333345677888888888777777774321 11222222 234555544433 4
Q ss_pred HHhhhccccceeeeccCchhHHHHHhcCCcEEeccCccccchhHHHHHhhhceEEEeeeccccCCcccChhHHHHHHHHH
Q 045570 349 VEILAHKAIGGFVSHCGWNSILESLWYGVPIATWPIYAEQQLNAFRMVKELGLALDLRLDYRVGSDLVMAGDIESAVRCL 428 (468)
Q Consensus 349 ~~iL~~~~~~~~i~HgG~~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~G~G~~~~~~~~~~~~~~~~~~l~~av~~v 428 (468)
..+...+++ .|+-+|. |+.|++.-|+|.+++|+...|---|...+.. |+-..+.. .++.+.+..-+.++
T Consensus 222 a~LMke~d~--aI~AaGs-tlyEa~~lgvP~l~l~~a~NQ~~~a~~f~~l-g~~~~l~~-------~l~~~~~~~~~~~i 290 (318)
T COG3980 222 AELMKEADL--AISAAGS-TLYEALLLGVPSLVLPLAENQIATAKEFEAL-GIIKQLGY-------HLKDLAKDYEILQI 290 (318)
T ss_pred HHHHHhcch--heeccch-HHHHHHHhcCCceEEeeeccHHHHHHHHHhc-CchhhccC-------CCchHHHHHHHHHh
Confidence 458889998 9999886 9999999999999999999999999988775 76665543 36777777777788
Q ss_pred hcCcHHHHHHHHH
Q 045570 429 MDGENKIRKKVKE 441 (468)
Q Consensus 429 l~~~~~~~~~a~~ 441 (468)
++ |...|++.-.
T Consensus 291 ~~-d~~~rk~l~~ 302 (318)
T COG3980 291 QK-DYARRKNLSF 302 (318)
T ss_pred hh-CHHHhhhhhh
Confidence 88 6666655433
No 61
>cd03786 GT1_UDP-GlcNAc_2-Epimerase Bacterial members of the UDP-N-Acetylglucosamine (GlcNAc) 2-Epimerase family are known to catalyze the reversible interconversion of UDP-GlcNAc and UDP-N-acetylmannosamine (UDP-ManNAc). The enzyme serves to produce an activated form of ManNAc residues (UDP-ManNAc) for use in the biosynthesis of a variety of cell surface polysaccharides; The mammalian enzyme is bifunctional, catalyzing both the inversion of stereochemistry at C-2 and the hydrolysis of the UDP-sugar linkage to generate free ManNAc. It also catalyzes the phosphorylation of ManNAc to generate ManNAc 6-phosphate, a precursor to salic acids. In mammals, sialic acids are found at the termini of oligosaccharides in a large variety of cell surface glycoconjugates and are key mediators of cell-cell recognition events. Mutations in human members of this family have been associated with Sialuria, a rare disease caused by the disorders of sialic acid metabolism. This family belongs to the GT-B st
Probab=98.68 E-value=5.2e-06 Score=81.37 Aligned_cols=140 Identities=14% Similarity=0.118 Sum_probs=85.4
Q ss_pred CCcEEEEeccCcccc-CHHHHHHHHHHHHhCCC-cEEEEEecCCCCCccccccccCCCCCCchhHHHHh--cCCeEEEEe
Q 045570 270 ESSVVFLCFGSSGSF-DVAQVKEIAIGLERSGY-NFLWSLRVSSPKDEVSAHRYVTNNGVFPEGFLERI--KGRGMIWGW 345 (468)
Q Consensus 270 ~~~vv~vs~GS~~~~-~~~~~~~~~~al~~~~~-~~iw~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~--~~~~~v~~~ 345 (468)
+++.|++++|..... ....+..+++++..... .+++....... ....+.+...+.. .+++.+.+.
T Consensus 197 ~~~~vlv~~~r~~~~~~~k~~~~l~~al~~l~~~~~~vi~~~~~~-----------~~~~l~~~~~~~~~~~~~v~~~~~ 265 (363)
T cd03786 197 PKKYILVTLHRVENVDDGEQLEEILEALAELAEEDVPVVFPNHPR-----------TRPRIREAGLEFLGHHPNVLLISP 265 (363)
T ss_pred CCCEEEEEeCCccccCChHHHHHHHHHHHHHHhcCCEEEEECCCC-----------hHHHHHHHHHhhccCCCCEEEECC
Confidence 345788888876543 34557778888776532 24433332210 0011111111111 356777765
Q ss_pred ccHH---HhhhccccceeeeccCchhHHHHHhcCCcEEeccCccccchhHHHHHhhhceEEEeeeccccCCcccChhHHH
Q 045570 346 VPQV---EILAHKAIGGFVSHCGWNSILESLWYGVPIATWPIYAEQQLNAFRMVKELGLALDLRLDYRVGSDLVMAGDIE 422 (468)
Q Consensus 346 vpq~---~iL~~~~~~~~i~HgG~~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~G~G~~~~~~~~~~~~~~~~~~l~ 422 (468)
.++. .++..+++ ||+..| |.+.|+++.|+|+|+++.. |. +..+.+. |+++.+. . +.+++.
T Consensus 266 ~~~~~~~~l~~~ad~--~v~~Sg-gi~~Ea~~~g~PvI~~~~~--~~--~~~~~~~-g~~~~~~--------~-~~~~i~ 328 (363)
T cd03786 266 LGYLYFLLLLKNADL--VLTDSG-GIQEEASFLGVPVLNLRDR--TE--RPETVES-GTNVLVG--------T-DPEAIL 328 (363)
T ss_pred cCHHHHHHHHHcCcE--EEEcCc-cHHhhhhhcCCCEEeeCCC--Cc--cchhhhe-eeEEecC--------C-CHHHHH
Confidence 5544 45777888 999999 7788999999999998743 22 3344455 7776543 1 588999
Q ss_pred HHHHHHhcCcHHHHHH
Q 045570 423 SAVRCLMDGENKIRKK 438 (468)
Q Consensus 423 ~av~~vl~~~~~~~~~ 438 (468)
+++.++++ ++..+++
T Consensus 329 ~~i~~ll~-~~~~~~~ 343 (363)
T cd03786 329 AAIEKLLS-DEFAYSL 343 (363)
T ss_pred HHHHHHhc-Cchhhhc
Confidence 99999998 5544433
No 62
>cd03795 GT1_like_4 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP-linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=98.65 E-value=3.7e-05 Score=74.82 Aligned_cols=134 Identities=15% Similarity=0.138 Sum_probs=83.3
Q ss_pred cEEEEeccCccccCHHHHHHHHHHHHhCC-CcEEEEEecCCCCCccccccccCCCCCCchhHHH-----HhcCCeEEEEe
Q 045570 272 SVVFLCFGSSGSFDVAQVKEIAIGLERSG-YNFLWSLRVSSPKDEVSAHRYVTNNGVFPEGFLE-----RIKGRGMIWGW 345 (468)
Q Consensus 272 ~vv~vs~GS~~~~~~~~~~~~~~al~~~~-~~~iw~~~~~~~~~~~~~~~~~~~~~~lp~~~~~-----~~~~~~~v~~~ 345 (468)
..+++..|++.. ...+..+++++.... .++++. |.+. ....+.+ ....|+.+.+|
T Consensus 191 ~~~i~~~G~~~~--~K~~~~li~a~~~l~~~~l~i~-G~g~----------------~~~~~~~~~~~~~~~~~V~~~g~ 251 (357)
T cd03795 191 RPFFLFVGRLVY--YKGLDVLLEAAAALPDAPLVIV-GEGP----------------LEAELEALAAALGLLDRVRFLGR 251 (357)
T ss_pred CcEEEEeccccc--ccCHHHHHHHHHhccCcEEEEE-eCCh----------------hHHHHHHHHHhcCCcceEEEcCC
Confidence 356677777642 223555666666655 444443 3220 1111111 23468889999
Q ss_pred ccHHH---hhhccccceeeec---cCc-hhHHHHHhcCCcEEeccCccccchhHHHHHhhhceEEEeeeccccCCcccCh
Q 045570 346 VPQVE---ILAHKAIGGFVSH---CGW-NSILESLWYGVPIATWPIYAEQQLNAFRMVKELGLALDLRLDYRVGSDLVMA 418 (468)
Q Consensus 346 vpq~~---iL~~~~~~~~i~H---gG~-~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~G~G~~~~~~~~~~~~~~~~ 418 (468)
+|+.+ ++..+++.++.++ -|+ .++.||+++|+|+|+....+.+..... .. +.|..++ .-+.
T Consensus 252 v~~~~~~~~~~~ad~~i~ps~~~~e~~g~~~~Ea~~~g~Pvi~~~~~~~~~~i~~---~~-~~g~~~~--------~~d~ 319 (357)
T cd03795 252 LDDEEKAALLAACDVFVFPSVERSEAFGIVLLEAMAFGKPVISTEIGTGGSYVNL---HG-VTGLVVP--------PGDP 319 (357)
T ss_pred CCHHHHHHHHHhCCEEEeCCcccccccchHHHHHHHcCCCEEecCCCCchhHHhh---CC-CceEEeC--------CCCH
Confidence 99754 7777888433332 343 379999999999999766555543332 23 6676665 4478
Q ss_pred hHHHHHHHHHhcCcHHHHH
Q 045570 419 GDIESAVRCLMDGENKIRK 437 (468)
Q Consensus 419 ~~l~~av~~vl~~~~~~~~ 437 (468)
+++.++|.++++ |++.++
T Consensus 320 ~~~~~~i~~l~~-~~~~~~ 337 (357)
T cd03795 320 AALAEAIRRLLE-DPELRE 337 (357)
T ss_pred HHHHHHHHHHHH-CHHHHH
Confidence 999999999998 664443
No 63
>TIGR02472 sucr_P_syn_N sucrose-phosphate synthase, putative, glycosyltransferase domain. This family consists of the N-terminal regions, or in some cases the entirety, of bacterial proteins closely related to plant sucrose-phosphate synthases (SPS). The C-terminal domain (TIGR02471), found with most members of this family, resembles both bona fide plant sucrose-phosphate phosphatases (SPP) and the SPP-like domain of plant SPS. At least two members of this family lack the SPP-like domain, which may have binding or regulatory rather than enzymatic activity by analogy to plant SPS. This enzyme produces sucrose 6-phosphate and UDP from UDP-glucose and D-fructose 6-phosphate, and may be encoded near the gene for fructokinase.
Probab=98.65 E-value=0.00012 Score=73.64 Aligned_cols=111 Identities=13% Similarity=0.043 Sum_probs=70.5
Q ss_pred cCCeEEEEeccHHHh---hhcc----ccceeeecc---C-chhHHHHHhcCCcEEeccCccccchhHHHHHhhhceEEEe
Q 045570 337 KGRGMIWGWVPQVEI---LAHK----AIGGFVSHC---G-WNSILESLWYGVPIATWPIYAEQQLNAFRMVKELGLALDL 405 (468)
Q Consensus 337 ~~~~~v~~~vpq~~i---L~~~----~~~~~i~Hg---G-~~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~G~G~~~ 405 (468)
.+++.+.+++++.++ +..+ ++ ||... | -.+++||+++|+|+|+-...+ ....+.+. ..|+.+
T Consensus 316 ~~~V~f~g~~~~~~~~~~~~~a~~~~Dv--~v~pS~~E~fg~~~lEAma~G~PvV~s~~gg----~~eiv~~~-~~G~lv 388 (439)
T TIGR02472 316 YGKVAYPKHHRPDDVPELYRLAARSRGI--FVNPALTEPFGLTLLEAAACGLPIVATDDGG----PRDIIANC-RNGLLV 388 (439)
T ss_pred CceEEecCCCCHHHHHHHHHHHhhcCCE--EecccccCCcccHHHHHHHhCCCEEEeCCCC----cHHHhcCC-CcEEEe
Confidence 467777788887665 5544 55 77643 3 359999999999999886533 33333332 467766
Q ss_pred eeccccCCcccChhHHHHHHHHHhcCcHHHHHHHHHHHHHHHHhhhcCCChHHHHHHHHHh
Q 045570 406 RLDYRVGSDLVMAGDIESAVRCLMDGENKIRKKVKEMAEISRKSLMEGGSSFNSIGQFISL 466 (468)
Q Consensus 406 ~~~~~~~~~~~~~~~l~~av~~vl~~~~~~~~~a~~l~~~~~~~~~~gg~~~~~~~~~~~~ 466 (468)
+ .-+.+++.++|.++++ |+..+ +++++..++.+.+.-+-...++++.+.
T Consensus 389 ~--------~~d~~~la~~i~~ll~-~~~~~---~~~~~~a~~~~~~~fsw~~~~~~~~~l 437 (439)
T TIGR02472 389 D--------VLDLEAIASALEDALS-DSSQW---QLWSRNGIEGVRRHYSWDAHVEKYLRI 437 (439)
T ss_pred C--------CCCHHHHHHHHHHHHh-CHHHH---HHHHHHHHHHHHHhCCHHHHHHHHHHH
Confidence 5 4478999999999998 66543 334444444333344444455555443
No 64
>cd03825 GT1_wcfI_like This family is most closely related to the GT1 family of glycosyltransferases. wcfI in Bacteroides fragilis has been shown to be involved in the capsular polysaccharide biosynthesis.
Probab=98.65 E-value=6.1e-05 Score=73.53 Aligned_cols=84 Identities=14% Similarity=0.081 Sum_probs=59.0
Q ss_pred cCCeEEEEecc-HH---Hhhhccccceeeecc----CchhHHHHHhcCCcEEeccCccccchhHHHHHhhhceEEEeeec
Q 045570 337 KGRGMIWGWVP-QV---EILAHKAIGGFVSHC----GWNSILESLWYGVPIATWPIYAEQQLNAFRMVKELGLALDLRLD 408 (468)
Q Consensus 337 ~~~~~v~~~vp-q~---~iL~~~~~~~~i~Hg----G~~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~G~G~~~~~~ 408 (468)
..++.+.+|++ +. .++..+++ +|.-. ..+++.||+++|+|+|+....+ ....+.+. +.|..++
T Consensus 243 ~~~v~~~g~~~~~~~~~~~~~~ad~--~l~ps~~e~~g~~~~Eam~~g~PvI~~~~~~----~~e~~~~~-~~g~~~~-- 313 (365)
T cd03825 243 PFPVHYLGSLNDDESLALIYSAADV--FVVPSLQENFPNTAIEALACGTPVVAFDVGG----IPDIVDHG-VTGYLAK-- 313 (365)
T ss_pred CCceEecCCcCCHHHHHHHHHhCCE--EEeccccccccHHHHHHHhcCCCEEEecCCC----ChhheeCC-CceEEeC--
Confidence 45677789998 44 46888888 77753 3579999999999999875432 22233332 4676655
Q ss_pred cccCCcccChhHHHHHHHHHhcCcHHHH
Q 045570 409 YRVGSDLVMAGDIESAVRCLMDGENKIR 436 (468)
Q Consensus 409 ~~~~~~~~~~~~l~~av~~vl~~~~~~~ 436 (468)
..+.+++.+++.++++ +++.+
T Consensus 314 ------~~~~~~~~~~l~~l~~-~~~~~ 334 (365)
T cd03825 314 ------PGDPEDLAEGIEWLLA-DPDER 334 (365)
T ss_pred ------CCCHHHHHHHHHHHHh-CHHHH
Confidence 4478999999999998 66533
No 65
>TIGR03449 mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-inositol-1-phosphate 1-alpha-D-N-acetylglucosaminyltransferase. Members of this protein family, found exclusively in the Actinobacteria, are MshA, the glycosyltransferase of mycothiol biosynthesis. Mycothiol replaces glutathione in these species.
Probab=98.62 E-value=0.00038 Score=69.26 Aligned_cols=86 Identities=14% Similarity=0.129 Sum_probs=61.2
Q ss_pred CCeEEEEeccHHH---hhhccccceeee---ccCc-hhHHHHHhcCCcEEeccCccccchhHHHHHhhhceEEEeeeccc
Q 045570 338 GRGMIWGWVPQVE---ILAHKAIGGFVS---HCGW-NSILESLWYGVPIATWPIYAEQQLNAFRMVKELGLALDLRLDYR 410 (468)
Q Consensus 338 ~~~~v~~~vpq~~---iL~~~~~~~~i~---HgG~-~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~G~G~~~~~~~~ 410 (468)
+++.+.+++|+.+ +|..+++ +|. +-|+ .+++||+++|+|+|+....+ ....+.+. +.|..++
T Consensus 283 ~~v~~~g~~~~~~~~~~l~~ad~--~v~ps~~E~~g~~~lEAma~G~Pvi~~~~~~----~~e~i~~~-~~g~~~~---- 351 (405)
T TIGR03449 283 DRVRFLPPRPPEELVHVYRAADV--VAVPSYNESFGLVAMEAQACGTPVVAARVGG----LPVAVADG-ETGLLVD---- 351 (405)
T ss_pred ceEEECCCCCHHHHHHHHHhCCE--EEECCCCCCcChHHHHHHHcCCCEEEecCCC----cHhhhccC-CceEECC----
Confidence 5788889998654 6888998 663 2233 58999999999999976533 33344443 5677665
Q ss_pred cCCcccChhHHHHHHHHHhcCcHHHHHHH
Q 045570 411 VGSDLVMAGDIESAVRCLMDGENKIRKKV 439 (468)
Q Consensus 411 ~~~~~~~~~~l~~av~~vl~~~~~~~~~a 439 (468)
.-+.+++.+++.++++ ++..+++.
T Consensus 352 ----~~d~~~la~~i~~~l~-~~~~~~~~ 375 (405)
T TIGR03449 352 ----GHDPADWADALARLLD-DPRTRIRM 375 (405)
T ss_pred ----CCCHHHHHHHHHHHHh-CHHHHHHH
Confidence 3478999999999998 66544433
No 66
>cd03798 GT1_wlbH_like This family is most closely related to the GT1 family of glycosyltransferases. wlbH in Bordetella parapertussis has been shown to be required for the biosynthesis of a trisaccharide that, when attached to the B. pertussis lipopolysaccharide (LPS) core (band B), generates band A LPS.
Probab=98.60 E-value=0.00024 Score=68.92 Aligned_cols=82 Identities=18% Similarity=0.112 Sum_probs=60.1
Q ss_pred cCCeEEEEeccHHH---hhhccccceeee----ccCchhHHHHHhcCCcEEeccCccccchhHHHHHhhhceEEEeeecc
Q 045570 337 KGRGMIWGWVPQVE---ILAHKAIGGFVS----HCGWNSILESLWYGVPIATWPIYAEQQLNAFRMVKELGLALDLRLDY 409 (468)
Q Consensus 337 ~~~~~v~~~vpq~~---iL~~~~~~~~i~----HgG~~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~G~G~~~~~~~ 409 (468)
.+++.+.+++++.+ ++..+++ +|. -|..+++.||+++|+|+|+-+.. .....+.+. +.|..++
T Consensus 258 ~~~v~~~g~~~~~~~~~~~~~ad~--~i~~~~~~~~~~~~~Ea~~~G~pvI~~~~~----~~~~~~~~~-~~g~~~~--- 327 (377)
T cd03798 258 EDRVTFLGAVPHEEVPAYYAAADV--FVLPSLREGFGLVLLEAMACGLPVVATDVG----GIPEIITDG-ENGLLVP--- 327 (377)
T ss_pred cceEEEeCCCCHHHHHHHHHhcCe--eecchhhccCChHHHHHHhcCCCEEEecCC----ChHHHhcCC-cceeEEC---
Confidence 45788889998754 6777887 552 24567899999999999986653 344444444 6677665
Q ss_pred ccCCcccChhHHHHHHHHHhcCcHH
Q 045570 410 RVGSDLVMAGDIESAVRCLMDGENK 434 (468)
Q Consensus 410 ~~~~~~~~~~~l~~av~~vl~~~~~ 434 (468)
.-+.+++.+++.++++ ++.
T Consensus 328 -----~~~~~~l~~~i~~~~~-~~~ 346 (377)
T cd03798 328 -----PGDPEALAEAILRLLA-DPW 346 (377)
T ss_pred -----CCCHHHHHHHHHHHhc-CcH
Confidence 5588999999999998 555
No 67
>cd03821 GT1_Bme6_like This family is most closely related to the GT1 family of glycosyltransferases. Bme6 in Brucella melitensis has been shown to be involved in the biosynthesis of a polysaccharide.
Probab=98.58 E-value=0.00039 Score=67.54 Aligned_cols=84 Identities=18% Similarity=0.093 Sum_probs=57.8
Q ss_pred cCCeEEEEeccHHH---hhhccccceeeecc----CchhHHHHHhcCCcEEeccCccccchhHHHHHhhhceEEEeeecc
Q 045570 337 KGRGMIWGWVPQVE---ILAHKAIGGFVSHC----GWNSILESLWYGVPIATWPIYAEQQLNAFRMVKELGLALDLRLDY 409 (468)
Q Consensus 337 ~~~~~v~~~vpq~~---iL~~~~~~~~i~Hg----G~~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~G~G~~~~~~~ 409 (468)
.+++.+.+|+++.+ ++..+++ +|.-. -.+++.||+++|+|+|+-+.. ..... ... +.|....
T Consensus 261 ~~~v~~~g~~~~~~~~~~~~~adv--~v~ps~~e~~~~~~~Eama~G~PvI~~~~~----~~~~~-~~~-~~~~~~~--- 329 (375)
T cd03821 261 EDRVTFTGMLYGEDKAAALADADL--FVLPSHSENFGIVVAEALACGTPVVTTDKV----PWQEL-IEY-GCGWVVD--- 329 (375)
T ss_pred cceEEEcCCCChHHHHHHHhhCCE--EEeccccCCCCcHHHHHHhcCCCEEEcCCC----CHHHH-hhc-CceEEeC---
Confidence 45788889999655 5778888 55432 246899999999999997543 33333 333 6676554
Q ss_pred ccCCcccChhHHHHHHHHHhcCcHHHHHH
Q 045570 410 RVGSDLVMAGDIESAVRCLMDGENKIRKK 438 (468)
Q Consensus 410 ~~~~~~~~~~~l~~av~~vl~~~~~~~~~ 438 (468)
.+.+++.++|.++++ +++.+++
T Consensus 330 ------~~~~~~~~~i~~l~~-~~~~~~~ 351 (375)
T cd03821 330 ------DDVDALAAALRRALE-LPQRLKA 351 (375)
T ss_pred ------CChHHHHHHHHHHHh-CHHHHHH
Confidence 134999999999998 6544433
No 68
>cd03799 GT1_amsK_like This is a family of GT1 glycosyltransferases found specifically in certain bacteria. amsK in Erwinia amylovora, has been reported to be involved in the biosynthesis of amylovoran, a exopolysaccharide acting as a virulence factor.
Probab=98.52 E-value=0.0001 Score=71.55 Aligned_cols=83 Identities=18% Similarity=0.188 Sum_probs=58.7
Q ss_pred cCCeEEEEeccHHH---hhhccccceeeec----------cCchhHHHHHhcCCcEEeccCccccchhHHHHHhhhceEE
Q 045570 337 KGRGMIWGWVPQVE---ILAHKAIGGFVSH----------CGWNSILESLWYGVPIATWPIYAEQQLNAFRMVKELGLAL 403 (468)
Q Consensus 337 ~~~~~v~~~vpq~~---iL~~~~~~~~i~H----------gG~~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~G~G~ 403 (468)
++++.+.+++|+.+ ++.++++ +|.- |.-+++.||+++|+|+|+.+..+ . ... .+....|.
T Consensus 235 ~~~v~~~g~~~~~~l~~~~~~adi--~l~~s~~~~~~~~e~~~~~~~Ea~a~G~Pvi~~~~~~-~---~~~-i~~~~~g~ 307 (355)
T cd03799 235 EDRVTLLGAKSQEEVRELLRAADL--FVLPSVTAADGDREGLPVVLMEAMAMGLPVISTDVSG-I---PEL-VEDGETGL 307 (355)
T ss_pred CCeEEECCcCChHHHHHHHHhCCE--EEecceecCCCCccCccHHHHHHHHcCCCEEecCCCC-c---chh-hhCCCceE
Confidence 46788889998654 6677888 5552 33478999999999999976532 2 223 33314777
Q ss_pred EeeeccccCCcccChhHHHHHHHHHhcCcHHH
Q 045570 404 DLRLDYRVGSDLVMAGDIESAVRCLMDGENKI 435 (468)
Q Consensus 404 ~~~~~~~~~~~~~~~~~l~~av~~vl~~~~~~ 435 (468)
.++ .-+.+++.++|.++++ ++..
T Consensus 308 ~~~--------~~~~~~l~~~i~~~~~-~~~~ 330 (355)
T cd03799 308 LVP--------PGDPEALADAIERLLD-DPEL 330 (355)
T ss_pred EeC--------CCCHHHHHHHHHHHHh-CHHH
Confidence 665 3488999999999998 5543
No 69
>cd03822 GT1_ecORF704_like This family is most closely related to the GT1 family of glycosyltransferases. ORF704 in E. coli has been shown to be involved in the biosynthesis of O-specific mannose homopolysaccharides.
Probab=98.48 E-value=0.00032 Score=68.28 Aligned_cols=108 Identities=14% Similarity=0.216 Sum_probs=68.0
Q ss_pred cCCeEEE-EeccHH---Hhhhccccceeee--c----cCchhHHHHHhcCCcEEeccCccccchhHHHHHhhhceEEEee
Q 045570 337 KGRGMIW-GWVPQV---EILAHKAIGGFVS--H----CGWNSILESLWYGVPIATWPIYAEQQLNAFRMVKELGLALDLR 406 (468)
Q Consensus 337 ~~~~~v~-~~vpq~---~iL~~~~~~~~i~--H----gG~~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~G~G~~~~ 406 (468)
.+++.+. +|+|+. .++..+++ +|. + |-.+++.||+++|+|+|+-+..+ ...+... +.|..++
T Consensus 246 ~~~v~~~~~~~~~~~~~~~~~~ad~--~v~ps~~e~~~~~~~~~Ea~a~G~PvI~~~~~~-----~~~i~~~-~~g~~~~ 317 (366)
T cd03822 246 ADRVIFINRYLPDEELPELFSAADV--VVLPYRSADQTQSGVLAYAIGFGKPVISTPVGH-----AEEVLDG-GTGLLVP 317 (366)
T ss_pred CCcEEEecCcCCHHHHHHHHhhcCE--EEecccccccccchHHHHHHHcCCCEEecCCCC-----hheeeeC-CCcEEEc
Confidence 4577777 458865 46777887 552 2 33568999999999999987654 2233344 6676665
Q ss_pred eccccCCcccChhHHHHHHHHHhcCcHHHHHHHHHHHHHHHHhhhcCCChHHHHHHHHH
Q 045570 407 LDYRVGSDLVMAGDIESAVRCLMDGENKIRKKVKEMAEISRKSLMEGGSSFNSIGQFIS 465 (468)
Q Consensus 407 ~~~~~~~~~~~~~~l~~av~~vl~~~~~~~~~a~~l~~~~~~~~~~gg~~~~~~~~~~~ 465 (468)
.-+.+++.+++.++++ |+..+++ +++..++..++ -+-...++++.+
T Consensus 318 --------~~d~~~~~~~l~~l~~-~~~~~~~---~~~~~~~~~~~-~s~~~~~~~~~~ 363 (366)
T cd03822 318 --------PGDPAALAEAIRRLLA-DPELAQA---LRARAREYARA-MSWERVAERYLR 363 (366)
T ss_pred --------CCCHHHHHHHHHHHHc-ChHHHHH---HHHHHHHHHhh-CCHHHHHHHHHH
Confidence 3468999999999998 6544333 33333333333 344444555544
No 70
>PF04007 DUF354: Protein of unknown function (DUF354); InterPro: IPR007152 Members of this family are around 350 amino acids in length. They are found in archaea and some bacteria and have no known function.
Probab=98.44 E-value=0.0004 Score=66.23 Aligned_cols=295 Identities=16% Similarity=0.124 Sum_probs=152.1
Q ss_pred CCCCChHHHHHHHHHHHhCCCCeEEEEEecCCCCChhhhhhhcccCCCCCCeEEEeCCCCCCCCCCCcCCChHHHHHHHH
Q 045570 12 PGIGHLVSTLEFAKHLTDRDDRISVTILSMKLAVAPWVDAYTKSLTDSQPRICVIDLPPVDPPLPDVLKKSPEYFISLVV 91 (468)
Q Consensus 12 p~~GH~~P~l~La~~L~~rGH~~~Vt~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (468)
...-|++-|-.+.++|.++||+ |.+.+-+.. .....++. .++++..+.... ......+....
T Consensus 8 ~~p~hvhfFk~~I~eL~~~Ghe--V~it~R~~~---~~~~LL~~-----yg~~y~~iG~~g--------~~~~~Kl~~~~ 69 (335)
T PF04007_consen 8 THPAHVHFFKNIIRELEKRGHE--VLITARDKD---ETEELLDL-----YGIDYIVIGKHG--------DSLYGKLLESI 69 (335)
T ss_pred CCchHHHHHHHHHHHHHhCCCE--EEEEEeccc---hHHHHHHH-----cCCCeEEEcCCC--------CCHHHHHHHHH
Confidence 3344999999999999999999 655554321 12233332 357777665321 12222222233
Q ss_pred HhhchhHHHHHHhhhccCCCCccEEEEcCCcchHHHHHHHcCCCeEEEeCchhHHHHHHhhhhcccccccccccCCCCcc
Q 045570 92 ESHLPNVKNIVSSRSNSGSLQVTGLVLDFFCVSMVDIAKELSLPSYMFLTSNMGFLRLMLYLPTRQDRISTVFESSDDEL 171 (468)
Q Consensus 92 ~~~~~~~~~~l~~~~~~~~~~~D~vv~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (468)
..+. .+...+.+. +||++|+-. .+.+..+|..+|+|++.|.=....... ...
T Consensus 70 ~R~~-~l~~~~~~~------~pDv~is~~-s~~a~~va~~lgiP~I~f~D~e~a~~~--------------------~~L 121 (335)
T PF04007_consen 70 ERQY-KLLKLIKKF------KPDVAISFG-SPEAARVAFGLGIPSIVFNDTEHAIAQ--------------------NRL 121 (335)
T ss_pred HHHH-HHHHHHHhh------CCCEEEecC-cHHHHHHHHHhCCCeEEEecCchhhcc--------------------cee
Confidence 3333 333344443 899999644 566777999999999987644321100 000
Q ss_pred ccCCCCCCCCCCc-CCCccccCCcchHHHHHHHhhccCCcEEE-EcCccccCHHHHHHhhcCCCCCeEEeccccCCCCCC
Q 045570 172 LIPGITSPVPVCV-MPSCLFNKDGGHATLVKLAQRFKDVDGII-VNTFHELEPYAVNAFSGDLNPPLYTAGPVLHLKSQP 249 (468)
Q Consensus 172 ~~p~~~~~~~~~~-l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~s~~~l~~~~~~~~~~~~~p~v~~vGpl~~~~~~~ 249 (468)
.+| +.-.- .|..+. ...+.+.. .+ ..+. .+.+.|+ .++-|+.
T Consensus 122 t~P-----la~~i~~P~~~~-----~~~~~~~G---~~-~~i~~y~G~~E~----------------ayl~~F~------ 165 (335)
T PF04007_consen 122 TLP-----LADVIITPEAIP-----KEFLKRFG---AK-NQIRTYNGYKEL----------------AYLHPFK------ 165 (335)
T ss_pred ehh-----cCCeeECCcccC-----HHHHHhcC---Cc-CCEEEECCeeeE----------------EeecCCC------
Confidence 111 10000 011010 00001000 00 1122 3333222 2222211
Q ss_pred CCCCChhcHhHHHHhhhcCCCCcEEEEeccCcc----ccCHHHHHHHHHHHHhCCCcEEEEEecCCCCCccccccccCCC
Q 045570 250 NPDLDEAQYQKIFQWLDDLAESSVVFLCFGSSG----SFDVAQVKEIAIGLERSGYNFLWSLRVSSPKDEVSAHRYVTNN 325 (468)
Q Consensus 250 ~~~~~~~~~~~~~~~l~~~~~~~vv~vs~GS~~----~~~~~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~~~~~~~~~ 325 (468)
+++++.+-|.- ++++.|++=+-+.. ....+.+.++++.|++.+..+|...+...
T Consensus 166 -------Pd~~vl~~lg~-~~~~yIvvR~~~~~A~y~~~~~~i~~~ii~~L~~~~~~vV~ipr~~~-------------- 223 (335)
T PF04007_consen 166 -------PDPEVLKELGL-DDEPYIVVRPEAWKASYDNGKKSILPEIIEELEKYGRNVVIIPRYED-------------- 223 (335)
T ss_pred -------CChhHHHHcCC-CCCCEEEEEeccccCeeecCccchHHHHHHHHHhhCceEEEecCCcc--------------
Confidence 12233333332 23457777666533 22335577899999988877555543321
Q ss_pred CCCchhHHHHhcCCeEEE-EeccHHHhhhccccceeeeccCchhHHHHHhcCCcEEeccCccccchhHHHHHhhhceEEE
Q 045570 326 GVFPEGFLERIKGRGMIW-GWVPQVEILAHKAIGGFVSHCGWNSILESLWYGVPIATWPIYAEQQLNAFRMVKELGLALD 404 (468)
Q Consensus 326 ~~lp~~~~~~~~~~~~v~-~~vpq~~iL~~~~~~~~i~HgG~~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~G~G~~ 404 (468)
.++-+ +.. ++.+. .-+.-.++|.++++ +|+-|| ....||..-|+|.|.+ +.++-...-+.+.+. |+ .
T Consensus 224 --~~~~~-~~~--~~~i~~~~vd~~~Ll~~a~l--~Ig~gg-TMa~EAA~LGtPaIs~-~~g~~~~vd~~L~~~-Gl--l 291 (335)
T PF04007_consen 224 --QRELF-EKY--GVIIPPEPVDGLDLLYYADL--VIGGGG-TMAREAALLGTPAISC-FPGKLLAVDKYLIEK-GL--L 291 (335)
T ss_pred --hhhHH-hcc--CccccCCCCCHHHHHHhcCE--EEeCCc-HHHHHHHHhCCCEEEe-cCCcchhHHHHHHHC-CC--e
Confidence 11111 111 22332 34555589999999 999887 7888999999999986 333322333456666 65 3
Q ss_pred eeeccccCCcccChhHHHHHHHHHhc
Q 045570 405 LRLDYRVGSDLVMAGDIESAVRCLMD 430 (468)
Q Consensus 405 ~~~~~~~~~~~~~~~~l~~av~~vl~ 430 (468)
.. ..+.+++.+.+++.+.
T Consensus 292 ~~--------~~~~~ei~~~v~~~~~ 309 (335)
T PF04007_consen 292 YH--------STDPDEIVEYVRKNLG 309 (335)
T ss_pred Ee--------cCCHHHHHHHHHHhhh
Confidence 22 4467777776655443
No 71
>TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant. Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein.
Probab=98.42 E-value=0.0019 Score=69.90 Aligned_cols=90 Identities=14% Similarity=0.054 Sum_probs=59.5
Q ss_pred cCCeEEEEeccHHH---hhhccc--cceeeec---cCc-hhHHHHHhcCCcEEeccCccccchhHHHHHhhhceEEEeee
Q 045570 337 KGRGMIWGWVPQVE---ILAHKA--IGGFVSH---CGW-NSILESLWYGVPIATWPIYAEQQLNAFRMVKELGLALDLRL 407 (468)
Q Consensus 337 ~~~~~v~~~vpq~~---iL~~~~--~~~~i~H---gG~-~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~G~G~~~~~ 407 (468)
.+++.+.+++++.+ ++..++ ..+||.- =|+ .+++||+++|+|+|+-...+ ....+... .-|+.++
T Consensus 547 ~g~V~FlG~v~~edvp~lYr~Ad~s~DVFV~PS~~EgFGLvlLEAMAcGlPVVASdvGG----~~EII~~g-~nGlLVd- 620 (1050)
T TIGR02468 547 YGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPMVATKNGG----PVDIHRVL-DNGLLVD- 620 (1050)
T ss_pred CCeEEecCCCCHHHHHHHHHHhhhcCCeeeCCcccCCCCHHHHHHHHhCCCEEEeCCCC----cHHHhccC-CcEEEEC-
Confidence 45677778888766 455452 1227764 233 48999999999999986543 22222222 4577665
Q ss_pred ccccCCcccChhHHHHHHHHHhcCcHHHHHHHH
Q 045570 408 DYRVGSDLVMAGDIESAVRCLMDGENKIRKKVK 440 (468)
Q Consensus 408 ~~~~~~~~~~~~~l~~av~~vl~~~~~~~~~a~ 440 (468)
.-+.+++.++|.++++ |+..+++..
T Consensus 621 -------P~D~eaLA~AL~~LL~-Dpelr~~m~ 645 (1050)
T TIGR02468 621 -------PHDQQAIADALLKLVA-DKQLWAECR 645 (1050)
T ss_pred -------CCCHHHHHHHHHHHhh-CHHHHHHHH
Confidence 4578999999999998 665544433
No 72
>KOG3349 consensus Predicted glycosyltransferase [General function prediction only]
Probab=98.41 E-value=1.7e-06 Score=69.71 Aligned_cols=111 Identities=23% Similarity=0.331 Sum_probs=75.2
Q ss_pred cEEEEeccCccccCHHH-----HHHHHHHHHhCCC-cEEEEEecCCCCCccccccccCCCCCCchhHHHHhcC-CeEE--
Q 045570 272 SVVFLCFGSSGSFDVAQ-----VKEIAIGLERSGY-NFLWSLRVSSPKDEVSAHRYVTNNGVFPEGFLERIKG-RGMI-- 342 (468)
Q Consensus 272 ~vv~vs~GS~~~~~~~~-----~~~~~~al~~~~~-~~iw~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~-~~~v-- 342 (468)
..+||+-||... ++. -.+..+.|.+.|. +.|..+|.+.+ ..++...+.... ...+
T Consensus 4 ~~vFVTVGtT~F--d~LI~~Vl~~~~~~~L~k~G~~kLiiQ~Grg~~--------------~~~d~~~~~~k~~gl~id~ 67 (170)
T KOG3349|consen 4 MTVFVTVGTTSF--DDLISCVLSEEFLQELQKRGFTKLIIQIGRGQP--------------FFGDPIDLIRKNGGLTIDG 67 (170)
T ss_pred eEEEEEeccccH--HHHHHHHcCHHHHHHHHHcCccEEEEEecCCcc--------------CCCCHHHhhcccCCeEEEE
Confidence 379999999651 111 2235666677665 77888887621 122222211112 2222
Q ss_pred EEeccH-HHhhhccccceeeeccCchhHHHHHhcCCcEEecc----CccccchhHHHHHhhhce
Q 045570 343 WGWVPQ-VEILAHKAIGGFVSHCGWNSILESLWYGVPIATWP----IYAEQQLNAFRMVKELGL 401 (468)
Q Consensus 343 ~~~vpq-~~iL~~~~~~~~i~HgG~~s~~eal~~GvP~v~~P----~~~DQ~~na~~~~~~~G~ 401 (468)
.+|-|- .+....+++ +|+|+|.||++|.|..|+|.|+++ +-..|-.-|..+++. |-
T Consensus 68 y~f~psl~e~I~~Adl--VIsHAGaGS~letL~l~KPlivVvNd~LMDNHQ~ELA~qL~~e-gy 128 (170)
T KOG3349|consen 68 YDFSPSLTEDIRSADL--VISHAGAGSCLETLRLGKPLIVVVNDSLMDNHQLELAKQLAEE-GY 128 (170)
T ss_pred EecCccHHHHHhhccE--EEecCCcchHHHHHHcCCCEEEEeChHhhhhHHHHHHHHHHhc-Cc
Confidence 267775 445566888 999999999999999999999999 346799999999887 64
No 73
>PRK14089 ipid-A-disaccharide synthase; Provisional
Probab=98.41 E-value=3.6e-05 Score=73.92 Aligned_cols=92 Identities=24% Similarity=0.213 Sum_probs=61.3
Q ss_pred HHHhhhccccceeeeccCchhHHHHHhcCCcEEeccCc--cccchhHHHHHhh--hceEEEeee-----cc--ccCCccc
Q 045570 348 QVEILAHKAIGGFVSHCGWNSILESLWYGVPIATWPIY--AEQQLNAFRMVKE--LGLALDLRL-----DY--RVGSDLV 416 (468)
Q Consensus 348 q~~iL~~~~~~~~i~HgG~~s~~eal~~GvP~v~~P~~--~DQ~~na~~~~~~--~G~G~~~~~-----~~--~~~~~~~ 416 (468)
-.+++..+++ .|+-+|..|+ |+..+|+|||+ ++- .-|+.||+++++. .|+.-.+.. .- +--.+.+
T Consensus 229 ~~~~m~~aDl--al~~SGT~TL-E~al~g~P~Vv-~Yk~~~lty~iak~lv~~~~igL~Nii~~~~~~~~vvPEllQ~~~ 304 (347)
T PRK14089 229 THKALLEAEF--AFICSGTATL-EAALIGTPFVL-AYKAKAIDYFIAKMFVKLKHIGLANIFFDFLGKEPLHPELLQEFV 304 (347)
T ss_pred HHHHHHhhhH--HHhcCcHHHH-HHHHhCCCEEE-EEeCCHHHHHHHHHHHcCCeeehHHHhcCCCcccccCchhhcccC
Confidence 3468899999 9999999999 99999999999 553 4688999998831 144432210 00 0013578
Q ss_pred ChhHHHHHHHHHhcCcHHHHHHHHHHHHH
Q 045570 417 MAGDIESAVRCLMDGENKIRKKVKEMAEI 445 (468)
Q Consensus 417 ~~~~l~~av~~vl~~~~~~~~~a~~l~~~ 445 (468)
|++.|.+++.+ .. ...+++...++.+.
T Consensus 305 t~~~la~~i~~-~~-~~~~~~~~~~l~~~ 331 (347)
T PRK14089 305 TVENLLKAYKE-MD-REKFFKKSKELREY 331 (347)
T ss_pred CHHHHHHHHHH-HH-HHHHHHHHHHHHHH
Confidence 89999999977 22 23444444444443
No 74
>PRK01021 lpxB lipid-A-disaccharide synthase; Reviewed
Probab=98.41 E-value=0.00052 Score=69.52 Aligned_cols=199 Identities=13% Similarity=0.076 Sum_probs=103.5
Q ss_pred CCCeEEec-cccCCCCCCCCCCChhcHhHHHHhhhcCCCCcEEEEeccCccccCHHHHHHHHHHHH--hC--CCcEEEEE
Q 045570 233 NPPLYTAG-PVLHLKSQPNPDLDEAQYQKIFQWLDDLAESSVVFLCFGSSGSFDVAQVKEIAIGLE--RS--GYNFLWSL 307 (468)
Q Consensus 233 ~p~v~~vG-pl~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vv~vs~GS~~~~~~~~~~~~~~al~--~~--~~~~iw~~ 307 (468)
.-++.+|| |+...-+. .....+..+-+.-.+++++|-+--||....=...+-.++++.+ .. +.+|+...
T Consensus 380 gv~v~yVGHPL~d~i~~------~~~~~~~r~~lgl~~~~~iIaLLPGSR~~EI~rllPv~l~aa~~~~l~~~l~fvvp~ 453 (608)
T PRK01021 380 PLRTVYLGHPLVETISS------FSPNLSWKEQLHLPSDKPIVAAFPGSRRGDILRNLTIQVQAFLASSLASTHQLLVSS 453 (608)
T ss_pred CCCeEEECCcHHhhccc------CCCHHHHHHHcCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHhccCeEEEEec
Confidence 34589999 77654321 1122233333332335578989899954222222333455554 32 44565532
Q ss_pred ecCCCCCccccccccCCCCCCchhHHHHhcC----CeEEEEeccHHHhhhccccceeeeccCchhHHHHHhcCCcEEecc
Q 045570 308 RVSSPKDEVSAHRYVTNNGVFPEGFLERIKG----RGMIWGWVPQVEILAHKAIGGFVSHCGWNSILESLWYGVPIATWP 383 (468)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~----~~~v~~~vpq~~iL~~~~~~~~i~HgG~~s~~eal~~GvP~v~~P 383 (468)
... ...+.+++...+ .+.++.--...+++..+++ .+.-+|- .++|+..+|+|||++=
T Consensus 454 a~~----------------~~~~~i~~~~~~~~~~~~~ii~~~~~~~~m~aaD~--aLaaSGT-aTLEaAL~g~PmVV~Y 514 (608)
T PRK01021 454 ANP----------------KYDHLILEVLQQEGCLHSHIVPSQFRYELMRECDC--ALAKCGT-IVLETALNQTPTIVTC 514 (608)
T ss_pred Cch----------------hhHHHHHHHHhhcCCCCeEEecCcchHHHHHhcCe--eeecCCH-HHHHHHHhCCCEEEEE
Confidence 221 011112221211 1233311012578888998 7777765 6789999999999952
Q ss_pred -CccccchhHHHHHhh--hceE-------EEeeeccccCCcccChhHHHHHHHHHhcCcHHHHHHHHHHHHHHHHhhhcC
Q 045570 384 -IYAEQQLNAFRMVKE--LGLA-------LDLRLDYRVGSDLVMAGDIESAVRCLMDGENKIRKKVKEMAEISRKSLMEG 453 (468)
Q Consensus 384 -~~~DQ~~na~~~~~~--~G~G-------~~~~~~~~~~~~~~~~~~l~~av~~vl~~~~~~~~~a~~l~~~~~~~~~~g 453 (468)
...=-+..++++.+. -=+| ..+-.+.-.+.+.+|+++|.+++ ++|. |+.++++.++--+++++.+.+|
T Consensus 515 K~s~Lty~Iak~Lvki~i~yIsLpNIIagr~VvPEllqgQ~~~tpe~La~~l-~lL~-d~~~r~~~~~~l~~lr~~Lg~~ 592 (608)
T PRK01021 515 QLRPFDTFLAKYIFKIILPAYSLPNIILGSTIFPEFIGGKKDFQPEEVAAAL-DILK-TSQSKEKQKDACRDLYQAMNES 592 (608)
T ss_pred ecCHHHHHHHHHHHhccCCeeehhHHhcCCCcchhhcCCcccCCHHHHHHHH-HHhc-CHHHHHHHHHHHHHHHHHhcCC
Confidence 111233455565540 0111 11111000012478999999997 8888 6767777766666677776655
Q ss_pred CChHH
Q 045570 454 GSSFN 458 (468)
Q Consensus 454 g~~~~ 458 (468)
-+.-.
T Consensus 593 ~~~~~ 597 (608)
T PRK01021 593 ASTMK 597 (608)
T ss_pred CCCHH
Confidence 55433
No 75
>cd03796 GT1_PIG-A_like This family is most closely related to the GT1 family of glycosyltransferases. Phosphatidylinositol glycan-class A (PIG-A), an X-linked gene in humans, is necessary for the synthesis of N-acetylglucosaminyl-phosphatidylinositol, a very early intermediate in glycosyl phosphatidylinositol (GPI)-anchor biosynthesis. The GPI-anchor is an important cellular structure that facilitates the attachment of many proteins to cell surfaces. Somatic mutations in PIG-A have been associated with Paroxysmal Nocturnal Hemoglobinuria (PNH), an acquired hematological disorder.
Probab=98.40 E-value=0.0009 Score=66.48 Aligned_cols=77 Identities=16% Similarity=0.179 Sum_probs=53.4
Q ss_pred cCCeEEEEeccHHH---hhhccccceeee---ccCch-hHHHHHhcCCcEEeccCccccchhHHHHHhhhceEEEeeecc
Q 045570 337 KGRGMIWGWVPQVE---ILAHKAIGGFVS---HCGWN-SILESLWYGVPIATWPIYAEQQLNAFRMVKELGLALDLRLDY 409 (468)
Q Consensus 337 ~~~~~v~~~vpq~~---iL~~~~~~~~i~---HgG~~-s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~G~G~~~~~~~ 409 (468)
.+++.+.+|+|+.+ +|+.+++ +|. +-|+| ++.||+++|+|+|+-+..+- ...+ .. |.+....
T Consensus 249 ~~~v~~~G~~~~~~~~~~l~~ad~--~v~pS~~E~~g~~~~EAma~G~PVI~s~~gg~----~e~i-~~-~~~~~~~--- 317 (398)
T cd03796 249 QDRVELLGAVPHERVRDVLVQGHI--FLNTSLTEAFCIAIVEAASCGLLVVSTRVGGI----PEVL-PP-DMILLAE--- 317 (398)
T ss_pred CCeEEEeCCCCHHHHHHHHHhCCE--EEeCChhhccCHHHHHHHHcCCCEEECCCCCc----hhhe-eC-CceeecC---
Confidence 35688889998654 7778888 654 22443 99999999999999777532 2232 33 4333222
Q ss_pred ccCCcccChhHHHHHHHHHhc
Q 045570 410 RVGSDLVMAGDIESAVRCLMD 430 (468)
Q Consensus 410 ~~~~~~~~~~~l~~av~~vl~ 430 (468)
.+.+++.+++.++++
T Consensus 318 ------~~~~~l~~~l~~~l~ 332 (398)
T cd03796 318 ------PDVESIVRKLEEAIS 332 (398)
T ss_pred ------CCHHHHHHHHHHHHh
Confidence 278999999999997
No 76
>cd04951 GT1_WbdM_like This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli. In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have
Probab=98.40 E-value=0.00054 Score=66.66 Aligned_cols=87 Identities=10% Similarity=0.109 Sum_probs=58.8
Q ss_pred CCeEEEEeccH-HHhhhccccceeeeccC----chhHHHHHhcCCcEEeccCccccchhHHHHHhhhceEEEeeeccccC
Q 045570 338 GRGMIWGWVPQ-VEILAHKAIGGFVSHCG----WNSILESLWYGVPIATWPIYAEQQLNAFRMVKELGLALDLRLDYRVG 412 (468)
Q Consensus 338 ~~~~v~~~vpq-~~iL~~~~~~~~i~HgG----~~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~G~G~~~~~~~~~~ 412 (468)
+++.+.++..+ ..++..+++ +|.-.. .+++.||+.+|+|+|+. |...+...+.+. |..+ .
T Consensus 245 ~~v~~~g~~~~~~~~~~~ad~--~v~~s~~e~~~~~~~Ea~a~G~PvI~~----~~~~~~e~i~~~-g~~~--~------ 309 (360)
T cd04951 245 NRVKLLGLRDDIAAYYNAADL--FVLSSAWEGFGLVVAEAMACELPVVAT----DAGGVREVVGDS-GLIV--P------ 309 (360)
T ss_pred CcEEEecccccHHHHHHhhce--EEecccccCCChHHHHHHHcCCCEEEe----cCCChhhEecCC-ceEe--C------
Confidence 56777877654 458888988 555332 56899999999999975 334444444432 5443 3
Q ss_pred CcccChhHHHHHHHHHhcCcHHHHHHHHH
Q 045570 413 SDLVMAGDIESAVRCLMDGENKIRKKVKE 441 (468)
Q Consensus 413 ~~~~~~~~l~~av~~vl~~~~~~~~~a~~ 441 (468)
.-+.+++.+++.++++.++.+++....
T Consensus 310 --~~~~~~~~~~i~~ll~~~~~~~~~~~~ 336 (360)
T cd04951 310 --ISDPEALANKIDEILKMSGEERDIIGA 336 (360)
T ss_pred --CCCHHHHHHHHHHHHhCCHHHHHHHHH
Confidence 347889999999999535666654443
No 77
>cd03805 GT1_ALG2_like This family is most closely related to the GT1 family of glycosyltransferases. ALG2, a 1,3-mannosyltransferase, in yeast catalyzes the mannosylation of Man(2)GlcNAc(2)-dolichol diphosphate and Man(1)GlcNAc(2)-dolichol diphosphate to form Man(3)GlcNAc(2)-dolichol diphosphate. A deficiency of this enzyme causes an abnormal accumulation of Man1GlcNAc2-PP-dolichol and Man2GlcNAc2-PP-dolichol, which is associated with a type of congenital disorders of glycosylation (CDG), designated CDG-Ii, in humans.
Probab=98.39 E-value=0.0006 Score=67.45 Aligned_cols=83 Identities=10% Similarity=0.083 Sum_probs=58.2
Q ss_pred cCCeEEEEeccHHH---hhhccccceeeec---cC-chhHHHHHhcCCcEEeccCccccchhHHHHHhhhceEEEeeecc
Q 045570 337 KGRGMIWGWVPQVE---ILAHKAIGGFVSH---CG-WNSILESLWYGVPIATWPIYAEQQLNAFRMVKELGLALDLRLDY 409 (468)
Q Consensus 337 ~~~~~v~~~vpq~~---iL~~~~~~~~i~H---gG-~~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~G~G~~~~~~~ 409 (468)
.+++.+.+++|+.. +|..+++ ++.. -| -.+++||+++|+|+|+.-..+ ....+.+. +.|..+.
T Consensus 279 ~~~V~f~g~~~~~~~~~~l~~ad~--~l~~s~~E~~g~~~lEAma~G~PvI~s~~~~----~~e~i~~~-~~g~~~~--- 348 (392)
T cd03805 279 EDQVIFLPSISDSQKELLLSSARA--LLYTPSNEHFGIVPLEAMYAGKPVIACNSGG----PLETVVDG-ETGFLCE--- 348 (392)
T ss_pred CceEEEeCCCChHHHHHHHhhCeE--EEECCCcCCCCchHHHHHHcCCCEEEECCCC----cHHHhccC-CceEEeC---
Confidence 46788899999764 6788888 6632 22 257899999999999975433 33344443 5676543
Q ss_pred ccCCcccChhHHHHHHHHHhcCcHHHH
Q 045570 410 RVGSDLVMAGDIESAVRCLMDGENKIR 436 (468)
Q Consensus 410 ~~~~~~~~~~~l~~av~~vl~~~~~~~ 436 (468)
. +.+++.++|.++++ +++.+
T Consensus 349 -----~-~~~~~a~~i~~l~~-~~~~~ 368 (392)
T cd03805 349 -----P-TPEEFAEAMLKLAN-DPDLA 368 (392)
T ss_pred -----C-CHHHHHHHHHHHHh-ChHHH
Confidence 3 78999999999998 55433
No 78
>cd05844 GT1_like_7 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center
Probab=98.39 E-value=0.00037 Score=68.15 Aligned_cols=84 Identities=19% Similarity=0.170 Sum_probs=62.0
Q ss_pred cCCeEEEEeccHHH---hhhccccceeeec----------cCchhHHHHHhcCCcEEeccCccccchhHHHHHhhhceEE
Q 045570 337 KGRGMIWGWVPQVE---ILAHKAIGGFVSH----------CGWNSILESLWYGVPIATWPIYAEQQLNAFRMVKELGLAL 403 (468)
Q Consensus 337 ~~~~~v~~~vpq~~---iL~~~~~~~~i~H----------gG~~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~G~G~ 403 (468)
.+++.+.+++|+.+ ++..+++ +|.- |-.+++.||+++|+|+|+-+..+ +...+.+. +.|.
T Consensus 244 ~~~v~~~g~~~~~~l~~~~~~ad~--~v~ps~~~~~~~~E~~~~~~~EA~a~G~PvI~s~~~~----~~e~i~~~-~~g~ 316 (367)
T cd05844 244 GGRVTFLGAQPHAEVRELMRRARI--FLQPSVTAPSGDAEGLPVVLLEAQASGVPVVATRHGG----IPEAVEDG-ETGL 316 (367)
T ss_pred CCeEEECCCCCHHHHHHHHHhCCE--EEECcccCCCCCccCCchHHHHHHHcCCCEEEeCCCC----chhheecC-CeeE
Confidence 46788889998765 5788888 6532 23578999999999999877643 45454454 7787
Q ss_pred EeeeccccCCcccChhHHHHHHHHHhcCcHHHH
Q 045570 404 DLRLDYRVGSDLVMAGDIESAVRCLMDGENKIR 436 (468)
Q Consensus 404 ~~~~~~~~~~~~~~~~~l~~av~~vl~~~~~~~ 436 (468)
.++ .-+.+++.+++.++++ |++.+
T Consensus 317 ~~~--------~~d~~~l~~~i~~l~~-~~~~~ 340 (367)
T cd05844 317 LVP--------EGDVAALAAALGRLLA-DPDLR 340 (367)
T ss_pred EEC--------CCCHHHHHHHHHHHHc-CHHHH
Confidence 765 4477999999999998 66433
No 79
>COG1519 KdtA 3-deoxy-D-manno-octulosonic-acid transferase [Cell envelope biogenesis, outer membrane]
Probab=98.36 E-value=0.0012 Score=63.46 Aligned_cols=87 Identities=22% Similarity=0.229 Sum_probs=65.5
Q ss_pred CeEEEEecc-HHHhhhcccc----ceeeeccCchhHHHHHhcCCcEEeccCccccchhHHHHHhhhceEEEeeeccccCC
Q 045570 339 RGMIWGWVP-QVEILAHKAI----GGFVSHCGWNSILESLWYGVPIATWPIYAEQQLNAFRMVKELGLALDLRLDYRVGS 413 (468)
Q Consensus 339 ~~~v~~~vp-q~~iL~~~~~----~~~i~HgG~~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~G~G~~~~~~~~~~~ 413 (468)
++.+.|-+- -..+++-+++ |-|+-+||+| .+|.+++|+|+|.=|+..-|.+.++++.+. |.|+.++
T Consensus 301 dV~l~DtmGEL~l~y~~adiAFVGGSlv~~GGHN-~LEpa~~~~pvi~Gp~~~Nf~ei~~~l~~~-ga~~~v~------- 371 (419)
T COG1519 301 DVLLGDTMGELGLLYGIADIAFVGGSLVPIGGHN-PLEPAAFGTPVIFGPYTFNFSDIAERLLQA-GAGLQVE------- 371 (419)
T ss_pred cEEEEecHhHHHHHHhhccEEEECCcccCCCCCC-hhhHHHcCCCEEeCCccccHHHHHHHHHhc-CCeEEEC-------
Confidence 455555543 2334444544 4466799987 689999999999999999999999999998 9999887
Q ss_pred cccChhHHHHHHHHHhcCcHHHHHH
Q 045570 414 DLVMAGDIESAVRCLMDGENKIRKK 438 (468)
Q Consensus 414 ~~~~~~~l~~av~~vl~~~~~~~~~ 438 (468)
+++.|.+++..+++ |+..+++
T Consensus 372 ---~~~~l~~~v~~l~~-~~~~r~~ 392 (419)
T COG1519 372 ---DADLLAKAVELLLA-DEDKREA 392 (419)
T ss_pred ---CHHHHHHHHHHhcC-CHHHHHH
Confidence 37888999987777 5544433
No 80
>cd03811 GT1_WabH_like This family is most closely related to the GT1 family of glycosyltransferases. WabH in Klebsiella pneumoniae has been shown to transfer a GlcNAc residue from UDP-GlcNAc onto the acceptor GalUA residue in the cellular outer core.
Probab=98.31 E-value=0.00061 Score=65.45 Aligned_cols=87 Identities=16% Similarity=0.124 Sum_probs=56.7
Q ss_pred cCCeEEEEeccH-HHhhhccccceeeec----cCchhHHHHHhcCCcEEeccCccccchhHHHHHhhhceEEEeeecccc
Q 045570 337 KGRGMIWGWVPQ-VEILAHKAIGGFVSH----CGWNSILESLWYGVPIATWPIYAEQQLNAFRMVKELGLALDLRLDYRV 411 (468)
Q Consensus 337 ~~~~~v~~~vpq-~~iL~~~~~~~~i~H----gG~~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~G~G~~~~~~~~~ 411 (468)
.+++.+.+|.+. ..++..+++ +|.- |.-+++.||+++|+|+|+-... .....+.+. +.|...+
T Consensus 245 ~~~v~~~g~~~~~~~~~~~~d~--~i~ps~~e~~~~~~~Ea~~~G~PvI~~~~~----~~~e~i~~~-~~g~~~~----- 312 (353)
T cd03811 245 ADRVHFLGFQSNPYPYLKAADL--FVLSSRYEGFPNVLLEAMALGTPVVATDCP----GPREILEDG-ENGLLVP----- 312 (353)
T ss_pred CccEEEecccCCHHHHHHhCCE--EEeCcccCCCCcHHHHHHHhCCCEEEcCCC----ChHHHhcCC-CceEEEC-----
Confidence 356777788764 358888988 5532 3356899999999999986543 445455554 7787766
Q ss_pred CCcccChhHH---HHHHHHHhcCcHHHHHHH
Q 045570 412 GSDLVMAGDI---ESAVRCLMDGENKIRKKV 439 (468)
Q Consensus 412 ~~~~~~~~~l---~~av~~vl~~~~~~~~~a 439 (468)
.-+.+.+ .+++.+.+. ++..++++
T Consensus 313 ---~~~~~~~~~~~~~i~~~~~-~~~~~~~~ 339 (353)
T cd03811 313 ---VGDEAALAAAALALLDLLL-DPELRERL 339 (353)
T ss_pred ---CCCHHHHHHHHHHHHhccC-ChHHHHHH
Confidence 4466666 555655555 45444333
No 81
>cd03807 GT1_WbnK_like This family is most closely related to the GT1 family of glycosyltransferases. WbnK in Shigella dysenteriae has been shown to be involved in the type 7 O-antigen biosynthesis.
Probab=98.24 E-value=0.0039 Score=60.23 Aligned_cols=107 Identities=17% Similarity=0.187 Sum_probs=64.3
Q ss_pred CCeEEEEecc-HHHhhhccccceeeeccC----chhHHHHHhcCCcEEeccCccccchhHHHHHhhhceEEEeeeccccC
Q 045570 338 GRGMIWGWVP-QVEILAHKAIGGFVSHCG----WNSILESLWYGVPIATWPIYAEQQLNAFRMVKELGLALDLRLDYRVG 412 (468)
Q Consensus 338 ~~~~v~~~vp-q~~iL~~~~~~~~i~HgG----~~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~G~G~~~~~~~~~~ 412 (468)
+++.+.+... -..++..+++ +|.... .+++.||+++|+|+|+... ..+...+.+ .|..++
T Consensus 251 ~~v~~~g~~~~~~~~~~~adi--~v~ps~~e~~~~~~~Ea~a~g~PvI~~~~----~~~~e~~~~---~g~~~~------ 315 (365)
T cd03807 251 DKVILLGERSDVPALLNALDV--FVLSSLSEGFPNVLLEAMACGLPVVATDV----GDNAELVGD---TGFLVP------ 315 (365)
T ss_pred ceEEEccccccHHHHHHhCCE--EEeCCccccCCcHHHHHHhcCCCEEEcCC----CChHHHhhc---CCEEeC------
Confidence 4555555443 3458888998 776544 3799999999999998544 344444333 344444
Q ss_pred CcccChhHHHHHHHHHhcCcHHHHHHHHHHHHHHHHhhhcCCChHHHHHHHHH
Q 045570 413 SDLVMAGDIESAVRCLMDGENKIRKKVKEMAEISRKSLMEGGSSFNSIGQFIS 465 (468)
Q Consensus 413 ~~~~~~~~l~~av~~vl~~~~~~~~~a~~l~~~~~~~~~~gg~~~~~~~~~~~ 465 (468)
.-+.+++.+++.++++ +++.++ ++++..++...+.-+-....+++.+
T Consensus 316 --~~~~~~l~~~i~~l~~-~~~~~~---~~~~~~~~~~~~~~s~~~~~~~~~~ 362 (365)
T cd03807 316 --PGDPEALAEAIEALLA-DPALRQ---ALGEAARERIEENFSIEAMVEAYEE 362 (365)
T ss_pred --CCCHHHHHHHHHHHHh-ChHHHH---HHHHHHHHHHHHhCCHHHHHHHHHH
Confidence 3368999999999998 543222 2233333332333444444555443
No 82
>cd04955 GT1_like_6 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=98.20 E-value=0.0055 Score=59.64 Aligned_cols=107 Identities=21% Similarity=0.236 Sum_probs=64.4
Q ss_pred cCCeEEEEeccHHH---hhhccccceeeeccCc-----hhHHHHHhcCCcEEeccCccccchhHHHHHhhhceEEEeeec
Q 045570 337 KGRGMIWGWVPQVE---ILAHKAIGGFVSHCGW-----NSILESLWYGVPIATWPIYAEQQLNAFRMVKELGLALDLRLD 408 (468)
Q Consensus 337 ~~~~~v~~~vpq~~---iL~~~~~~~~i~HgG~-----~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~G~G~~~~~~ 408 (468)
.+++.+.+++|+.+ .+..+++ ++.+.-. +++.||+++|+|+|+....+... .+... |.. +..
T Consensus 247 ~~~V~~~g~~~~~~~~~~~~~ad~--~v~ps~~~e~~~~~~~EAma~G~PvI~s~~~~~~e----~~~~~-g~~--~~~- 316 (363)
T cd04955 247 DPRIIFVGPIYDQELLELLRYAAL--FYLHGHSVGGTNPSLLEAMAYGCPVLASDNPFNRE----VLGDK-AIY--FKV- 316 (363)
T ss_pred CCcEEEccccChHHHHHHHHhCCE--EEeCCccCCCCChHHHHHHHcCCCEEEecCCccce----eecCC-eeE--ecC-
Confidence 46788889999875 4555666 5554433 47999999999999976543221 11111 333 221
Q ss_pred cccCCcccChhHHHHHHHHHhcCcHHHHHHHHHHHHHHHHhhhcCCChHHHHHHHHHh
Q 045570 409 YRVGSDLVMAGDIESAVRCLMDGENKIRKKVKEMAEISRKSLMEGGSSFNSIGQFISL 466 (468)
Q Consensus 409 ~~~~~~~~~~~~l~~av~~vl~~~~~~~~~a~~l~~~~~~~~~~gg~~~~~~~~~~~~ 466 (468)
.+.+.+++.++++ +++.+++ +++..++...+.-+-....+++++.
T Consensus 317 ---------~~~l~~~i~~l~~-~~~~~~~---~~~~~~~~~~~~fs~~~~~~~~~~~ 361 (363)
T cd04955 317 ---------GDDLASLLEELEA-DPEEVSA---MAKAARERIREKYTWEKIADQYEEL 361 (363)
T ss_pred ---------chHHHHHHHHHHh-CHHHHHH---HHHHHHHHHHHhCCHHHHHHHHHHH
Confidence 1129999999998 6543333 4444444434445555566666654
No 83
>cd03819 GT1_WavL_like This family is most closely related to the GT1 family of glycosyltransferases. WavL in Vibrio cholerae has been shown to be involved in the biosynthesis of the lipopolysaccharide core.
Probab=98.20 E-value=0.0043 Score=60.23 Aligned_cols=139 Identities=14% Similarity=-0.002 Sum_probs=79.2
Q ss_pred cEEEEeccCccc-cCHHHHHHHHHHHHhC--CCcEEEEEecCCCCCccccccccCCCCCCchhHH---H--HhcCCeEEE
Q 045570 272 SVVFLCFGSSGS-FDVAQVKEIAIGLERS--GYNFLWSLRVSSPKDEVSAHRYVTNNGVFPEGFL---E--RIKGRGMIW 343 (468)
Q Consensus 272 ~vv~vs~GS~~~-~~~~~~~~~~~al~~~--~~~~iw~~~~~~~~~~~~~~~~~~~~~~lp~~~~---~--~~~~~~~v~ 343 (468)
..+++..|++.. -..+.+.+++..+... +.++++. |.... ...+...+. . ...+++.+.
T Consensus 185 ~~~i~~~Gr~~~~Kg~~~li~~~~~l~~~~~~~~l~iv-G~~~~------------~~~~~~~~~~~~~~~~~~~~v~~~ 251 (355)
T cd03819 185 KPVILLPGRLTRWKGQEVFIEALARLKKDDPDVHLLIV-GDAQG------------RRFYYAELLELIKRLGLQDRVTFV 251 (355)
T ss_pred ceEEEEeeccccccCHHHHHHHHHHHHhcCCCeEEEEE-ECCcc------------cchHHHHHHHHHHHcCCcceEEEc
Confidence 466677777653 3345566666666553 3444443 43210 011111111 1 123567888
Q ss_pred Eecc-HHHhhhccccceeeec--cC-chhHHHHHhcCCcEEeccCccccchhHHHHHhhhceEEEeeeccccCCcccChh
Q 045570 344 GWVP-QVEILAHKAIGGFVSH--CG-WNSILESLWYGVPIATWPIYAEQQLNAFRMVKELGLALDLRLDYRVGSDLVMAG 419 (468)
Q Consensus 344 ~~vp-q~~iL~~~~~~~~i~H--gG-~~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~G~G~~~~~~~~~~~~~~~~~ 419 (468)
+|.+ ...+|..+++..+-++ -| .++++||+++|+|+|+.-.. .....+.+. +.|..++ .-+.+
T Consensus 252 g~~~~~~~~l~~ad~~i~ps~~~e~~~~~l~EA~a~G~PvI~~~~~----~~~e~i~~~-~~g~~~~--------~~~~~ 318 (355)
T cd03819 252 GHCSDMPAAYALADIVVSASTEPEAFGRTAVEAQAMGRPVIASDHG----GARETVRPG-ETGLLVP--------PGDAE 318 (355)
T ss_pred CCcccHHHHHHhCCEEEecCCCCCCCchHHHHHHhcCCCEEEcCCC----CcHHHHhCC-CceEEeC--------CCCHH
Confidence 8854 3448888998333331 23 35999999999999987543 233344343 4777765 44889
Q ss_pred HHHHHHHHHhcCcHHHH
Q 045570 420 DIESAVRCLMDGENKIR 436 (468)
Q Consensus 420 ~l~~av~~vl~~~~~~~ 436 (468)
++.++|..++..++..+
T Consensus 319 ~l~~~i~~~~~~~~~~~ 335 (355)
T cd03819 319 ALAQALDQILSLLPEGR 335 (355)
T ss_pred HHHHHHHHHHhhCHHHH
Confidence 99999976664344433
No 84
>TIGR02470 sucr_synth sucrose synthase. This model represents sucrose synthase, an enzyme that, despite its name, generally uses rather produces sucrose. Sucrose plus UDP (or ADP) becomes D-fructose plus UDP-glucose (or ADP-glucose), which is then available for cell wall (or starch) biosynthesis. The enzyme is homologous to sucrose phosphate synthase, which catalyzes the penultimate step in sucrose synthesis. Sucrose synthase is found, so far, exclusively in plants and cyanobacteria.
Probab=98.20 E-value=0.01 Score=62.80 Aligned_cols=89 Identities=12% Similarity=0.063 Sum_probs=54.4
Q ss_pred cCCeEEEEec-cH---HHhhhc-cc-cceeeec---cC-chhHHHHHhcCCcEEeccCccccchhHHHHHhhhceEEEee
Q 045570 337 KGRGMIWGWV-PQ---VEILAH-KA-IGGFVSH---CG-WNSILESLWYGVPIATWPIYAEQQLNAFRMVKELGLALDLR 406 (468)
Q Consensus 337 ~~~~~v~~~v-pq---~~iL~~-~~-~~~~i~H---gG-~~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~G~G~~~~ 406 (468)
.+++.+.++. +. ..++.+ ++ .++||.- =| -.+++||+++|+|+|+--..+ ....+.+. .-|..++
T Consensus 618 ~g~V~flG~~~~~~~~~elyr~iAd~adVfV~PS~~EpFGLvvLEAMAcGlPVVAT~~GG----~~EiV~dg-~tGfLVd 692 (784)
T TIGR02470 618 HGQIRWIGAQLNRVRNGELYRYIADTKGIFVQPALYEAFGLTVLEAMTCGLPTFATRFGG----PLEIIQDG-VSGFHID 692 (784)
T ss_pred CCeEEEccCcCCcccHHHHHHHhhccCcEEEECCcccCCCHHHHHHHHcCCCEEEcCCCC----HHHHhcCC-CcEEEeC
Confidence 3567766663 32 345543 22 1236642 23 348999999999999875543 44444443 5687776
Q ss_pred eccccCCcccChhHHHHHHHHHhc---CcHHHHHH
Q 045570 407 LDYRVGSDLVMAGDIESAVRCLMD---GENKIRKK 438 (468)
Q Consensus 407 ~~~~~~~~~~~~~~l~~av~~vl~---~~~~~~~~ 438 (468)
.-+.+++.++|.++++ .|++.+++
T Consensus 693 --------p~D~eaLA~aL~~ll~kll~dp~~~~~ 719 (784)
T TIGR02470 693 --------PYHGEEAAEKIVDFFEKCDEDPSYWQK 719 (784)
T ss_pred --------CCCHHHHHHHHHHHHHHhcCCHHHHHH
Confidence 4477889999988762 15655444
No 85
>cd03802 GT1_AviGT4_like This family is most closely related to the GT1 family of glycosyltransferases. aviGT4 in Streptomyces viridochromogenes has been shown to be involved in biosynthesis of oligosaccharide antibiotic avilamycin A. Inactivation of aviGT4 resulted in a mutant that accumulated a novel avilamycin derivative lacking the terminal eurekanate residue.
Probab=98.18 E-value=0.0015 Score=62.81 Aligned_cols=127 Identities=14% Similarity=0.043 Sum_probs=75.8
Q ss_pred EEEeccCccccCHHHHHHHHHHHHhCCCcEEEEEecCCCCCccccccccCCCCCCchhHHHH--hcCCeEEEEeccHHH-
Q 045570 274 VFLCFGSSGSFDVAQVKEIAIGLERSGYNFLWSLRVSSPKDEVSAHRYVTNNGVFPEGFLER--IKGRGMIWGWVPQVE- 350 (468)
Q Consensus 274 v~vs~GS~~~~~~~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~--~~~~~~v~~~vpq~~- 350 (468)
+.+..|... .......+++++.+.+.++++. |..... +.+-....+. ..+++.+.+++++.+
T Consensus 173 ~i~~~Gr~~--~~Kg~~~li~~~~~~~~~l~i~-G~~~~~------------~~~~~~~~~~~~~~~~v~~~G~~~~~~~ 237 (335)
T cd03802 173 YLLFLGRIS--PEKGPHLAIRAARRAGIPLKLA-GPVSDP------------DYFYREIAPELLDGPDIEYLGEVGGAEK 237 (335)
T ss_pred EEEEEEeec--cccCHHHHHHHHHhcCCeEEEE-eCCCCH------------HHHHHHHHHhcccCCcEEEeCCCCHHHH
Confidence 334456652 2233556777777778776654 432100 0011111112 246888899999764
Q ss_pred --hhhccccceeee--ccCc-hhHHHHHhcCCcEEeccCccccchhHHHHHhhhceEEEeeeccccCCcccChhHHHHHH
Q 045570 351 --ILAHKAIGGFVS--HCGW-NSILESLWYGVPIATWPIYAEQQLNAFRMVKELGLALDLRLDYRVGSDLVMAGDIESAV 425 (468)
Q Consensus 351 --iL~~~~~~~~i~--HgG~-~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~G~G~~~~~~~~~~~~~~~~~~l~~av 425 (468)
+++.+++-++-+ +-|+ .++.||+++|+|+|+....+ .... .+....|..++ . .+++.+++
T Consensus 238 ~~~~~~~d~~v~ps~~~E~~~~~~lEAma~G~PvI~~~~~~----~~e~-i~~~~~g~l~~--------~--~~~l~~~l 302 (335)
T cd03802 238 AELLGNARALLFPILWEEPFGLVMIEAMACGTPVIAFRRGA----VPEV-VEDGVTGFLVD--------S--VEELAAAV 302 (335)
T ss_pred HHHHHhCcEEEeCCcccCCcchHHHHHHhcCCCEEEeCCCC----chhh-eeCCCcEEEeC--------C--HHHHHHHH
Confidence 578888833323 2343 48999999999999886532 2223 33313676654 2 89999999
Q ss_pred HHHhc
Q 045570 426 RCLMD 430 (468)
Q Consensus 426 ~~vl~ 430 (468)
.+++.
T Consensus 303 ~~l~~ 307 (335)
T cd03802 303 ARADR 307 (335)
T ss_pred HHHhc
Confidence 98876
No 86
>PF02684 LpxB: Lipid-A-disaccharide synthetase; InterPro: IPR003835 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. These enzymes belong to the glycosyltransferase family 19 GT19 from CAZY. Lipid-A-disaccharide synthetase 2.4.1.182 from EC is involved with acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase 2.3.1.129 from EC and tetraacyldisaccharide 4'-kinase 2.7.1.130 from EC in the biosynthesis of the phosphorylated glycolipid, lipid A, in the outer membrane of Escherichia coli and other bacteria. These enzymes catalyse the first disaccharide step in the synthesis of lipid-A-disaccharide.; GO: 0008915 lipid-A-disaccharide synthase activity, 0009245 lipid A biosynthetic process
Probab=98.13 E-value=0.00026 Score=68.43 Aligned_cols=196 Identities=20% Similarity=0.144 Sum_probs=109.0
Q ss_pred CCeEEec-cccCCCCCCCCCCChhcHhHHHHh-hhcCCCCcEEEEeccCccccCHHHHHHHHHHHHh-----CCCcEEEE
Q 045570 234 PPLYTAG-PVLHLKSQPNPDLDEAQYQKIFQW-LDDLAESSVVFLCFGSSGSFDVAQVKEIAIGLER-----SGYNFLWS 306 (468)
Q Consensus 234 p~v~~vG-pl~~~~~~~~~~~~~~~~~~~~~~-l~~~~~~~vv~vs~GS~~~~~~~~~~~~~~al~~-----~~~~~iw~ 306 (468)
-++.+|| |+...-.. ........+. ++. ++++|-+--||...-=...+-.++++.+. .+.+|++.
T Consensus 153 ~~~~~VGHPl~d~~~~------~~~~~~~~~~~l~~--~~~iIaLLPGSR~~EI~rllP~~l~aa~~l~~~~p~l~fvvp 224 (373)
T PF02684_consen 153 VPVTYVGHPLLDEVKP------EPDRAEAREKLLDP--DKPIIALLPGSRKSEIKRLLPIFLEAAKLLKKQRPDLQFVVP 224 (373)
T ss_pred CCeEEECCcchhhhcc------CCCHHHHHHhcCCC--CCcEEEEeCCCCHHHHHHHHHHHHHHHHHHHHhCCCeEEEEe
Confidence 4599999 77654332 1122333333 333 45689999999542111112223444332 35566665
Q ss_pred EecCCCCCccccccccCCCCCCchhHHH---HhcCCeEEE-EeccHHHhhhccccceeeeccCchhHHHHHhcCCcEEec
Q 045570 307 LRVSSPKDEVSAHRYVTNNGVFPEGFLE---RIKGRGMIW-GWVPQVEILAHKAIGGFVSHCGWNSILESLWYGVPIATW 382 (468)
Q Consensus 307 ~~~~~~~~~~~~~~~~~~~~~lp~~~~~---~~~~~~~v~-~~vpq~~iL~~~~~~~~i~HgG~~s~~eal~~GvP~v~~ 382 (468)
..... ..+-+.+ ....+..+. ..-.-.+++..+++ .+.-.| ..|+|+..+|+|||++
T Consensus 225 ~a~~~----------------~~~~i~~~~~~~~~~~~~~~~~~~~~~~m~~ad~--al~~SG-TaTLE~Al~g~P~Vv~ 285 (373)
T PF02684_consen 225 VAPEV----------------HEELIEEILAEYPPDVSIVIIEGESYDAMAAADA--ALAASG-TATLEAALLGVPMVVA 285 (373)
T ss_pred cCCHH----------------HHHHHHHHHHhhCCCCeEEEcCCchHHHHHhCcc--hhhcCC-HHHHHHHHhCCCEEEE
Confidence 43221 1111111 112222322 22245557888887 555555 4688999999999986
Q ss_pred cCc-cccchhHHHHHhhhceEE-------EeeeccccCCcccChhHHHHHHHHHhcCcHHHHHHHHHHHHHHHHhhhcCC
Q 045570 383 PIY-AEQQLNAFRMVKELGLAL-------DLRLDYRVGSDLVMAGDIESAVRCLMDGENKIRKKVKEMAEISRKSLMEGG 454 (468)
Q Consensus 383 P~~-~DQ~~na~~~~~~~G~G~-------~~~~~~~~~~~~~~~~~l~~av~~vl~~~~~~~~~a~~l~~~~~~~~~~gg 454 (468)
=-. .=.+..|+++++.-=+|+ .+-.+. -.+.+|++.+.+++.+++. |+..++......+.+++..+.|.
T Consensus 286 Yk~~~lt~~iak~lvk~~~isL~Niia~~~v~PEl--iQ~~~~~~~i~~~~~~ll~-~~~~~~~~~~~~~~~~~~~~~~~ 362 (373)
T PF02684_consen 286 YKVSPLTYFIAKRLVKVKYISLPNIIAGREVVPEL--IQEDATPENIAAELLELLE-NPEKRKKQKELFREIRQLLGPGA 362 (373)
T ss_pred EcCcHHHHHHHHHhhcCCEeechhhhcCCCcchhh--hcccCCHHHHHHHHHHHhc-CHHHHHHHHHHHHHHHHhhhhcc
Confidence 321 123445555544311221 000000 1358899999999999999 67667788888888888877777
Q ss_pred ChHHH
Q 045570 455 SSFNS 459 (468)
Q Consensus 455 ~~~~~ 459 (468)
++..+
T Consensus 363 ~~~~~ 367 (373)
T PF02684_consen 363 SSRAA 367 (373)
T ss_pred CCHHH
Confidence 77654
No 87
>cd03812 GT1_CapH_like This family is most closely related to the GT1 family of glycosyltransferases. capH in Staphylococcus aureus has been shown to be required for the biosynthesis of the type 1 capsular polysaccharide (CP1).
Probab=98.10 E-value=0.008 Score=58.40 Aligned_cols=86 Identities=10% Similarity=0.033 Sum_probs=58.6
Q ss_pred cCCeEEEEeccH-HHhhhccccceeeec----cCchhHHHHHhcCCcEEeccCccccchhHHHHHhhhceEEEeeecccc
Q 045570 337 KGRGMIWGWVPQ-VEILAHKAIGGFVSH----CGWNSILESLWYGVPIATWPIYAEQQLNAFRMVKELGLALDLRLDYRV 411 (468)
Q Consensus 337 ~~~~~v~~~vpq-~~iL~~~~~~~~i~H----gG~~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~G~G~~~~~~~~~ 411 (468)
.+++.+.++..+ ..++..+++ +|.- |-.++++||+++|+|+|+-...+- ... ... +.|....
T Consensus 248 ~~~v~~~g~~~~~~~~~~~adi--~v~ps~~E~~~~~~lEAma~G~PvI~s~~~~~----~~~-i~~-~~~~~~~----- 314 (358)
T cd03812 248 EDKVIFLGVRNDVPELLQAMDV--FLFPSLYEGLPLVLIEAQASGLPCILSDTITK----EVD-LTD-LVKFLSL----- 314 (358)
T ss_pred CCcEEEecccCCHHHHHHhcCE--EEecccccCCCHHHHHHHHhCCCEEEEcCCch----hhh-hcc-CccEEeC-----
Confidence 356777777544 458888888 5543 446799999999999998765442 222 233 4554443
Q ss_pred CCcccChhHHHHHHHHHhcCcHHHHHHH
Q 045570 412 GSDLVMAGDIESAVRCLMDGENKIRKKV 439 (468)
Q Consensus 412 ~~~~~~~~~l~~av~~vl~~~~~~~~~a 439 (468)
.-+.+++.++|.++++ |+..+++.
T Consensus 315 ---~~~~~~~a~~i~~l~~-~~~~~~~~ 338 (358)
T cd03812 315 ---DESPEIWAEEILKLKS-EDRRERSS 338 (358)
T ss_pred ---CCCHHHHHHHHHHHHh-Ccchhhhh
Confidence 3357999999999999 66555444
No 88
>TIGR02149 glgA_Coryne glycogen synthase, Corynebacterium family. This model describes Corynebacterium glutamicum GlgA and closely related proteins in several other species. This enzyme is required for glycogen biosynthesis and appears to replace the distantly related TIGR02095 family of ADP-glucose type glycogen synthase in Corynebacterium glutamicum, Mycobacterium tuberculosis, Bifidobacterium longum, and Streptomyces coelicolor.
Probab=98.01 E-value=0.017 Score=56.87 Aligned_cols=87 Identities=15% Similarity=0.127 Sum_probs=54.9
Q ss_pred eEEE-EeccHHH---hhhccccceeeec----cCchhHHHHHhcCCcEEeccCccccchhHHHHHhhhceEEEeeecccc
Q 045570 340 GMIW-GWVPQVE---ILAHKAIGGFVSH----CGWNSILESLWYGVPIATWPIYAEQQLNAFRMVKELGLALDLRLDYRV 411 (468)
Q Consensus 340 ~~v~-~~vpq~~---iL~~~~~~~~i~H----gG~~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~G~G~~~~~~~~~ 411 (468)
+... +++++.+ ++..+|+ ||.= +...++.||+++|+|+|+.... .....+.+. +.|..++.+..
T Consensus 262 v~~~~~~~~~~~~~~~~~~aDv--~v~ps~~e~~g~~~lEA~a~G~PvI~s~~~----~~~e~i~~~-~~G~~~~~~~~- 333 (388)
T TIGR02149 262 IIWINKMLPKEELVELLSNAEV--FVCPSIYEPLGIVNLEAMACGTPVVASATG----GIPEVVVDG-ETGFLVPPDNS- 333 (388)
T ss_pred eEEecCCCCHHHHHHHHHhCCE--EEeCCccCCCChHHHHHHHcCCCEEEeCCC----CHHHHhhCC-CceEEcCCCCC-
Confidence 4433 6777544 6788898 6642 2235779999999999997543 344444444 67877763200
Q ss_pred CCcccChhHHHHHHHHHhcCcHHHH
Q 045570 412 GSDLVMAGDIESAVRCLMDGENKIR 436 (468)
Q Consensus 412 ~~~~~~~~~l~~av~~vl~~~~~~~ 436 (468)
...-..+++.++|.++++ |+..+
T Consensus 334 -~~~~~~~~l~~~i~~l~~-~~~~~ 356 (388)
T TIGR02149 334 -DADGFQAELAKAINILLA-DPELA 356 (388)
T ss_pred -cccchHHHHHHHHHHHHh-CHHHH
Confidence 001112899999999998 55443
No 89
>PF02350 Epimerase_2: UDP-N-acetylglucosamine 2-epimerase; InterPro: IPR003331 UDP-N-acetylglucosamine 2-epimerase 5.1.3.14 from EC catalyses the production of UDP-ManNAc from UDP-GlcNAc. Some of the enzymes is this family are bifunctional. In microorganisms the epimerase is involved in in the synthesis of the capsule precursor UDP-ManNAcA [, ]. The protein from rat liver displays both epimerase and kinase activity [].; GO: 0008761 UDP-N-acetylglucosamine 2-epimerase activity, 0006047 UDP-N-acetylglucosamine metabolic process, 0009103 lipopolysaccharide biosynthetic process; PDB: 1V4V_B 3BEO_B 3DZC_B 3OT5_B 1O6C_B 1VGV_D 1F6D_C.
Probab=97.90 E-value=0.0007 Score=65.53 Aligned_cols=136 Identities=15% Similarity=0.156 Sum_probs=79.5
Q ss_pred CCCcEEEEeccCccccC-H---HHHHHHHHHHHhC-CCcEEEEEecCCCCCccccccccCCCCCCchhHHHHhc--CCeE
Q 045570 269 AESSVVFLCFGSSGSFD-V---AQVKEIAIGLERS-GYNFLWSLRVSSPKDEVSAHRYVTNNGVFPEGFLERIK--GRGM 341 (468)
Q Consensus 269 ~~~~vv~vs~GS~~~~~-~---~~~~~~~~al~~~-~~~~iw~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~--~~~~ 341 (468)
.+++.+++++=...... + .++.+++++|... +.++||....... ....+.+... +|+.
T Consensus 178 ~~~~~iLvt~H~~t~~~~~~~~~~i~~~l~~L~~~~~~~vi~~~hn~p~---------------~~~~i~~~l~~~~~v~ 242 (346)
T PF02350_consen 178 APKPYILVTLHPVTNEDNPERLEQILEALKALAERQNVPVIFPLHNNPR---------------GSDIIIEKLKKYDNVR 242 (346)
T ss_dssp TTSEEEEEE-S-CCCCTHH--HHHHHHHHHHHHHHTTEEEEEE--S-HH---------------HHHHHHHHHTT-TTEE
T ss_pred cCCCEEEEEeCcchhcCChHHHHHHHHHHHHHHhcCCCcEEEEecCCch---------------HHHHHHHHhcccCCEE
Confidence 45679999995555444 3 3566677777665 7889998773310 1111122211 4788
Q ss_pred EEEecc---HHHhhhccccceeeeccCchhHH-HHHhcCCcEEeccCccccchhHHHHHhhhceEEEeeeccccCCcccC
Q 045570 342 IWGWVP---QVEILAHKAIGGFVSHCGWNSIL-ESLWYGVPIATWPIYAEQQLNAFRMVKELGLALDLRLDYRVGSDLVM 417 (468)
Q Consensus 342 v~~~vp---q~~iL~~~~~~~~i~HgG~~s~~-eal~~GvP~v~~P~~~DQ~~na~~~~~~~G~G~~~~~~~~~~~~~~~ 417 (468)
+++-++ ...++.++++ +|+..| ++. ||.+.|+|.|.+=..++.+. - ... |..+.+ ..+
T Consensus 243 ~~~~l~~~~~l~ll~~a~~--vvgdSs--GI~eEa~~lg~P~v~iR~~geRqe---~-r~~-~~nvlv---------~~~ 304 (346)
T PF02350_consen 243 LIEPLGYEEYLSLLKNADL--VVGDSS--GIQEEAPSLGKPVVNIRDSGERQE---G-RER-GSNVLV---------GTD 304 (346)
T ss_dssp EE----HHHHHHHHHHESE--EEESSH--HHHHHGGGGT--EEECSSS-S-HH---H-HHT-TSEEEE---------TSS
T ss_pred EECCCCHHHHHHHHhcceE--EEEcCc--cHHHHHHHhCCeEEEecCCCCCHH---H-Hhh-cceEEe---------CCC
Confidence 885554 5668889999 999999 666 99999999999922222221 1 122 555542 468
Q ss_pred hhHHHHHHHHHhcCcHHHHHH
Q 045570 418 AGDIESAVRCLMDGENKIRKK 438 (468)
Q Consensus 418 ~~~l~~av~~vl~~~~~~~~~ 438 (468)
.++|.+++++++. +....++
T Consensus 305 ~~~I~~ai~~~l~-~~~~~~~ 324 (346)
T PF02350_consen 305 PEAIIQAIEKALS-DKDFYRK 324 (346)
T ss_dssp HHHHHHHHHHHHH--HHHHHH
T ss_pred HHHHHHHHHHHHh-ChHHHHh
Confidence 9999999999998 4344433
No 90
>TIGR03568 NeuC_NnaA UDP-N-acetyl-D-glucosamine 2-epimerase, UDP-hydrolysing. This family of enzymes catalyzes the combined epimerization and UDP-hydrolysis of UDP-N-acetylglucosamine to N-acetylmannosamine. This is in contrast to the related enzyme WecB (TIGR00236) which retains the UDP moiety. NeuC acts in concert with NeuA and NeuB to synthesize CMP-N5-acetyl-neuraminate.
Probab=97.82 E-value=0.015 Score=56.96 Aligned_cols=130 Identities=14% Similarity=0.165 Sum_probs=78.6
Q ss_pred CcEEEEeccCcc---ccCHHHHHHHHHHHHhCCCcEEEEEecCCCCCccccccccCCCCCCchhHHHHh--cCCeEEEEe
Q 045570 271 SSVVFLCFGSSG---SFDVAQVKEIAIGLERSGYNFLWSLRVSSPKDEVSAHRYVTNNGVFPEGFLERI--KGRGMIWGW 345 (468)
Q Consensus 271 ~~vv~vs~GS~~---~~~~~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~--~~~~~v~~~ 345 (468)
++.|+|++=... ....+.+.++++++...+..+++......+.. ..+-+.+.+.. .+++.+.+-
T Consensus 201 ~~~vlvt~Hp~~~~~~~~~~~l~~li~~L~~~~~~~~vi~P~~~p~~-----------~~i~~~i~~~~~~~~~v~l~~~ 269 (365)
T TIGR03568 201 KPYALVTFHPVTLEKESAEEQIKELLKALDELNKNYIFTYPNADAGS-----------RIINEAIEEYVNEHPNFRLFKS 269 (365)
T ss_pred CCEEEEEeCCCcccccCchHHHHHHHHHHHHhccCCEEEEeCCCCCc-----------hHHHHHHHHHhcCCCCEEEECC
Confidence 358888875433 33456789999999887766666543221100 11111122111 357888754
Q ss_pred c---cHHHhhhccccceeeeccCchhHHHHHhcCCcEEeccCccccchhHHHHHhhhceEEEeeeccccCCcccChhHHH
Q 045570 346 V---PQVEILAHKAIGGFVSHCGWNSILESLWYGVPIATWPIYAEQQLNAFRMVKELGLALDLRLDYRVGSDLVMAGDIE 422 (468)
Q Consensus 346 v---pq~~iL~~~~~~~~i~HgG~~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~G~G~~~~~~~~~~~~~~~~~~l~ 422 (468)
+ ....++.++++ +|+.++.+- .||.+.|+|.|.+- +-+ ...+. |.-+.+- ..++++|.
T Consensus 270 l~~~~~l~Ll~~a~~--vitdSSggi-~EA~~lg~Pvv~l~---~R~----e~~~~-g~nvl~v--------g~~~~~I~ 330 (365)
T TIGR03568 270 LGQERYLSLLKNADA--VIGNSSSGI-IEAPSFGVPTINIG---TRQ----KGRLR-ADSVIDV--------DPDKEEIV 330 (365)
T ss_pred CChHHHHHHHHhCCE--EEEcChhHH-HhhhhcCCCEEeec---CCc----hhhhh-cCeEEEe--------CCCHHHHH
Confidence 4 45558889998 998885555 99999999999773 211 11122 4332211 44789999
Q ss_pred HHHHHHhc
Q 045570 423 SAVRCLMD 430 (468)
Q Consensus 423 ~av~~vl~ 430 (468)
++++++++
T Consensus 331 ~a~~~~~~ 338 (365)
T TIGR03568 331 KAIEKLLD 338 (365)
T ss_pred HHHHHHhC
Confidence 99999554
No 91
>cd04946 GT1_AmsK_like This family is most closely related to the GT1 family of glycosyltransferases. AmsK is involved in the biosynthesis of amylovoran, which functions as a virulence factor. It functions as a glycosyl transferase which transfers galactose from UDP-galactose to a lipid-linked amylovoran-subunit precursor. The members of this family are found mainly in bacteria and Archaea.
Probab=97.79 E-value=0.0011 Score=66.04 Aligned_cols=111 Identities=17% Similarity=0.176 Sum_probs=74.2
Q ss_pred CCeEEEEeccHHH---hhhccccceeeeccC----chhHHHHHhcCCcEEeccCccccchhHHHHHhhhceEEEeeeccc
Q 045570 338 GRGMIWGWVPQVE---ILAHKAIGGFVSHCG----WNSILESLWYGVPIATWPIYAEQQLNAFRMVKELGLALDLRLDYR 410 (468)
Q Consensus 338 ~~~~v~~~vpq~~---iL~~~~~~~~i~HgG----~~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~G~G~~~~~~~~ 410 (468)
.++.+.+|+++.+ ++..+++.+||...- -++++||+++|+|+|+-...+ ....+.+. +.|..+..
T Consensus 289 ~~V~f~G~v~~~e~~~~~~~~~~~v~v~~S~~Eg~p~~llEAma~G~PVIas~vgg----~~e~i~~~-~~G~l~~~--- 360 (407)
T cd04946 289 ISVNFTGELSNSEVYKLYKENPVDVFVNLSESEGLPVSIMEAMSFGIPVIATNVGG----TPEIVDNG-GNGLLLSK--- 360 (407)
T ss_pred ceEEEecCCChHHHHHHHhhcCCCEEEeCCccccccHHHHHHHHcCCCEEeCCCCC----cHHHhcCC-CcEEEeCC---
Confidence 4678889999775 444433434775543 468999999999999865433 44444332 47876652
Q ss_pred cCCcccChhHHHHHHHHHhcCcHHHHHHHHHHHHHHHHhhhcCCChHHHHHHHH
Q 045570 411 VGSDLVMAGDIESAVRCLMDGENKIRKKVKEMAEISRKSLMEGGSSFNSIGQFI 464 (468)
Q Consensus 411 ~~~~~~~~~~l~~av~~vl~~~~~~~~~a~~l~~~~~~~~~~gg~~~~~~~~~~ 464 (468)
.-+.+++.++|.++++ |+..+++ +++..++.+++.-+.....++|+
T Consensus 361 ----~~~~~~la~~I~~ll~-~~~~~~~---m~~~ar~~~~~~f~~~~~~~~~~ 406 (407)
T cd04946 361 ----DPTPNELVSSLSKFID-NEEEYQT---MREKAREKWEENFNASKNYREFA 406 (407)
T ss_pred ----CCCHHHHHHHHHHHHh-CHHHHHH---HHHHHHHHHHHHcCHHHhHHHhc
Confidence 4478999999999998 6654433 44555555555667667777665
No 92
>PLN00142 sucrose synthase
Probab=97.74 E-value=0.083 Score=56.22 Aligned_cols=85 Identities=14% Similarity=0.135 Sum_probs=51.6
Q ss_pred CCeEEEE----eccHHHhhhc----cccceeeec---cCch-hHHHHHhcCCcEEeccCccccchhHHHHHhhhceEEEe
Q 045570 338 GRGMIWG----WVPQVEILAH----KAIGGFVSH---CGWN-SILESLWYGVPIATWPIYAEQQLNAFRMVKELGLALDL 405 (468)
Q Consensus 338 ~~~~v~~----~vpq~~iL~~----~~~~~~i~H---gG~~-s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~G~G~~~ 405 (468)
+++.+.+ .++..+++.. .++ ||.- =|+| ++.||+++|+|+|+-...+ ....+.+. ..|..+
T Consensus 642 ~~V~flG~~~~~~~~~eLyr~iadaaDV--fVlPS~~EgFGLvvLEAMA~GlPVVATdvGG----~~EIV~dG-~tG~LV 714 (815)
T PLN00142 642 GQFRWIAAQTNRVRNGELYRYIADTKGA--FVQPALYEAFGLTVVEAMTCGLPTFATCQGG----PAEIIVDG-VSGFHI 714 (815)
T ss_pred CcEEEcCCcCCcccHHHHHHHHHhhCCE--EEeCCcccCCCHHHHHHHHcCCCEEEcCCCC----HHHHhcCC-CcEEEe
Confidence 4555543 3344555542 344 7653 4444 8999999999999875543 34343333 468777
Q ss_pred eeccccCCcccChhHHHHHHHHHh----cCcHHHHHH
Q 045570 406 RLDYRVGSDLVMAGDIESAVRCLM----DGENKIRKK 438 (468)
Q Consensus 406 ~~~~~~~~~~~~~~~l~~av~~vl----~~~~~~~~~ 438 (468)
+ .-+.+++.++|.+++ + |+..+++
T Consensus 715 ~--------P~D~eaLA~aI~~lLekLl~-Dp~lr~~ 742 (815)
T PLN00142 715 D--------PYHGDEAANKIADFFEKCKE-DPSYWNK 742 (815)
T ss_pred C--------CCCHHHHHHHHHHHHHHhcC-CHHHHHH
Confidence 6 346777888876654 5 6655544
No 93
>PLN02275 transferase, transferring glycosyl groups
Probab=97.68 E-value=0.066 Score=52.59 Aligned_cols=75 Identities=12% Similarity=0.144 Sum_probs=51.4
Q ss_pred CCeEEEE-eccHHHh---hhccccceeee-c-----cC-chhHHHHHhcCCcEEeccCccccchhHHHHHhhhceEEEee
Q 045570 338 GRGMIWG-WVPQVEI---LAHKAIGGFVS-H-----CG-WNSILESLWYGVPIATWPIYAEQQLNAFRMVKELGLALDLR 406 (468)
Q Consensus 338 ~~~~v~~-~vpq~~i---L~~~~~~~~i~-H-----gG-~~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~G~G~~~~ 406 (468)
+|+.+.+ |+|+.++ |+.+|+ ||. + -| -++++||+++|+|+|+....+ +...+.+. +.|..++
T Consensus 286 ~~v~~~~~~~~~~~~~~~l~~aDv--~v~~~~s~~~e~~p~~llEAmA~G~PVVa~~~gg----~~eiv~~g-~~G~lv~ 358 (371)
T PLN02275 286 RHVAFRTMWLEAEDYPLLLGSADL--GVSLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSC----IGELVKDG-KNGLLFS 358 (371)
T ss_pred CceEEEcCCCCHHHHHHHHHhCCE--EEEeccccccccccHHHHHHHHCCCCEEEecCCC----hHHHccCC-CCeEEEC
Confidence 3455554 7887665 888999 663 1 12 357999999999999975432 44444444 6787654
Q ss_pred eccccCCcccChhHHHHHHHHHh
Q 045570 407 LDYRVGSDLVMAGDIESAVRCLM 429 (468)
Q Consensus 407 ~~~~~~~~~~~~~~l~~av~~vl 429 (468)
+.+++.++|.+++
T Consensus 359 ----------~~~~la~~i~~l~ 371 (371)
T PLN02275 359 ----------SSSELADQLLELL 371 (371)
T ss_pred ----------CHHHHHHHHHHhC
Confidence 4788999988764
No 94
>COG0763 LpxB Lipid A disaccharide synthetase [Cell envelope biogenesis, outer membrane]
Probab=97.67 E-value=0.017 Score=55.13 Aligned_cols=207 Identities=17% Similarity=0.065 Sum_probs=104.9
Q ss_pred CCCCeEEec-cccCCCCCCCCCCChhcHhHHHHhhhcCCCCcEEEEeccCccccCH---HHHHHHHHHHHh--CCCcEEE
Q 045570 232 LNPPLYTAG-PVLHLKSQPNPDLDEAQYQKIFQWLDDLAESSVVFLCFGSSGSFDV---AQVKEIAIGLER--SGYNFLW 305 (468)
Q Consensus 232 ~~p~v~~vG-pl~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vv~vs~GS~~~~~~---~~~~~~~~al~~--~~~~~iw 305 (468)
..| ..||| |+....+- .+......+-+.-..+++++.+--||..+.-. ..+.+.++.|.. .+.+|+.
T Consensus 155 g~~-~~yVGHpl~d~i~~------~~~r~~ar~~l~~~~~~~~lalLPGSR~sEI~rl~~~f~~a~~~l~~~~~~~~~vl 227 (381)
T COG0763 155 GLP-CTYVGHPLADEIPL------LPDREAAREKLGIDADEKTLALLPGSRRSEIRRLLPPFVQAAQELKARYPDLKFVL 227 (381)
T ss_pred CCC-eEEeCChhhhhccc------cccHHHHHHHhCCCCCCCeEEEecCCcHHHHHHHHHHHHHHHHHHHhhCCCceEEE
Confidence 344 89999 66544321 22223333333223345699999999542111 122223333331 3567777
Q ss_pred EEecCCCCCccccccccCCCCCCchhHHHHhcCCe-EEEEec-c-H-HHhhhccccceeeeccCchhHHHHHhcCCcEEe
Q 045570 306 SLRVSSPKDEVSAHRYVTNNGVFPEGFLERIKGRG-MIWGWV-P-Q-VEILAHKAIGGFVSHCGWNSILESLWYGVPIAT 381 (468)
Q Consensus 306 ~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~-~v~~~v-p-q-~~iL~~~~~~~~i~HgG~~s~~eal~~GvP~v~ 381 (468)
-+....- +.+-. +....+. ...-++ + + ..++..+|+ .+.-+|- -++|+.-+|+|||+
T Consensus 228 p~~~~~~-------------~~~~~---~~~~~~~~~~~~~~~~~~~~~a~~~aD~--al~aSGT-~tLE~aL~g~P~Vv 288 (381)
T COG0763 228 PLVNAKY-------------RRIIE---EALKWEVAGLSLILIDGEKRKAFAAADA--ALAASGT-ATLEAALAGTPMVV 288 (381)
T ss_pred ecCcHHH-------------HHHHH---HHhhccccCceEEecCchHHHHHHHhhH--HHHhccH-HHHHHHHhCCCEEE
Confidence 6543210 00000 1111111 111222 2 2 236777887 6666665 56899999999998
Q ss_pred ccCc-cccchhHHHHHhhhceEE-------EeeeccccCCcccChhHHHHHHHHHhcCcHHHHHHHHHHHHHHHHhhhcC
Q 045570 382 WPIY-AEQQLNAFRMVKELGLAL-------DLRLDYRVGSDLVMAGDIESAVRCLMDGENKIRKKVKEMAEISRKSLMEG 453 (468)
Q Consensus 382 ~P~~-~DQ~~na~~~~~~~G~G~-------~~~~~~~~~~~~~~~~~l~~av~~vl~~~~~~~~~a~~l~~~~~~~~~~g 453 (468)
.=-. .=-++.+++..+-+=+++ .+-... -.+.++++.|.+++.+++. |+.-++..++--+.+++.+..+
T Consensus 289 ~Yk~~~it~~iak~lvk~~yisLpNIi~~~~ivPEl--iq~~~~pe~la~~l~~ll~-~~~~~~~~~~~~~~l~~~l~~~ 365 (381)
T COG0763 289 AYKVKPITYFIAKRLVKLPYVSLPNILAGREIVPEL--IQEDCTPENLARALEELLL-NGDRREALKEKFRELHQYLRED 365 (381)
T ss_pred EEeccHHHHHHHHHhccCCcccchHHhcCCccchHH--HhhhcCHHHHHHHHHHHhc-ChHhHHHHHHHHHHHHHHHcCC
Confidence 5110 012233444433321221 111000 0247889999999999998 5633344444444455555557
Q ss_pred CChHHHHHHHHHhh
Q 045570 454 GSSFNSIGQFISLN 467 (468)
Q Consensus 454 g~~~~~~~~~~~~~ 467 (468)
++++...+.+++.+
T Consensus 366 ~~~e~aA~~vl~~~ 379 (381)
T COG0763 366 PASEIAAQAVLELL 379 (381)
T ss_pred cHHHHHHHHHHHHh
Confidence 67777777766643
No 95
>cd03806 GT1_ALG11_like This family is most closely related to the GT1 family of glycosyltransferases. ALG11 in yeast is involved in adding the final 1,2-linked Man to the Man5GlcNAc2-PP-Dol synthesized on the cytosolic face of the ER. The deletion analysis of ALG11 was shown to block the early steps of core biosynthesis that takes place on the cytoplasmic face of the ER and lead to a defect in the assembly of lipid-linked oligosaccharides.
Probab=97.66 E-value=0.021 Score=57.02 Aligned_cols=82 Identities=15% Similarity=0.069 Sum_probs=55.4
Q ss_pred cCCeEEEEeccHHH---hhhccccceeee-----ccCchhHHHHHhcCCcEEeccCccccchhHHHHH----hhhceEEE
Q 045570 337 KGRGMIWGWVPQVE---ILAHKAIGGFVS-----HCGWNSILESLWYGVPIATWPIYAEQQLNAFRMV----KELGLALD 404 (468)
Q Consensus 337 ~~~~~v~~~vpq~~---iL~~~~~~~~i~-----HgG~~s~~eal~~GvP~v~~P~~~DQ~~na~~~~----~~~G~G~~ 404 (468)
.+++.+.+++|+.+ +|..+++ +|+ |-| .++.||+++|+|.|+.-..+.-. -+. .. ..|..
T Consensus 304 ~~~V~f~g~v~~~~l~~~l~~adv--~v~~s~~E~Fg-i~~lEAMa~G~pvIa~~~ggp~~----~iv~~~~~g-~~G~l 375 (419)
T cd03806 304 EDKVEFVVNAPFEELLEELSTASI--GLHTMWNEHFG-IGVVEYMAAGLIPLAHASGGPLL----DIVVPWDGG-PTGFL 375 (419)
T ss_pred CCeEEEecCCCHHHHHHHHHhCeE--EEECCccCCcc-cHHHHHHHcCCcEEEEcCCCCch----heeeccCCC-CceEE
Confidence 46788889998765 6777887 554 333 38899999999999875433211 112 22 46654
Q ss_pred eeeccccCCcccChhHHHHHHHHHhcCcHHHH
Q 045570 405 LRLDYRVGSDLVMAGDIESAVRCLMDGENKIR 436 (468)
Q Consensus 405 ~~~~~~~~~~~~~~~~l~~av~~vl~~~~~~~ 436 (468)
.. +.+++.+++.+++++++..+
T Consensus 376 ~~----------d~~~la~ai~~ll~~~~~~~ 397 (419)
T cd03806 376 AS----------TAEEYAEAIEKILSLSEEER 397 (419)
T ss_pred eC----------CHHHHHHHHHHHHhCCHHHH
Confidence 32 78999999999998433333
No 96
>COG0381 WecB UDP-N-acetylglucosamine 2-epimerase [Cell envelope biogenesis, outer membrane]
Probab=97.64 E-value=0.0061 Score=58.17 Aligned_cols=137 Identities=14% Similarity=0.189 Sum_probs=88.7
Q ss_pred CcEEEEeccCccccCHHHHHHHHHHHHh----C-CCcEEEEEecCCCCCccccccccCCCCCCchhHHHHhc--CCeEEE
Q 045570 271 SSVVFLCFGSSGSFDVAQVKEIAIGLER----S-GYNFLWSLRVSSPKDEVSAHRYVTNNGVFPEGFLERIK--GRGMIW 343 (468)
Q Consensus 271 ~~vv~vs~GS~~~~~~~~~~~~~~al~~----~-~~~~iw~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~--~~~~v~ 343 (468)
+..+.+++=-..+.. +.+.+|.+++.+ . +..+|...-.. ..+.+-...+.. .++.+.
T Consensus 204 ~~~iLvT~HRreN~~-~~~~~i~~al~~i~~~~~~~~viyp~H~~---------------~~v~e~~~~~L~~~~~v~li 267 (383)
T COG0381 204 KKYILVTAHRRENVG-EPLEEICEALREIAEEYPDVIVIYPVHPR---------------PRVRELVLKRLKNVERVKLI 267 (383)
T ss_pred CcEEEEEcchhhccc-ccHHHHHHHHHHHHHhCCCceEEEeCCCC---------------hhhhHHHHHHhCCCCcEEEe
Confidence 348888875554444 445555555433 3 44555443322 001111112333 346665
Q ss_pred ---EeccHHHhhhccccceeeeccCchhHHHHHhcCCcEEeccCccccchhHHHHHhhhceEEEeeeccccCCcccChhH
Q 045570 344 ---GWVPQVEILAHKAIGGFVSHCGWNSILESLWYGVPIATWPIYAEQQLNAFRMVKELGLALDLRLDYRVGSDLVMAGD 420 (468)
Q Consensus 344 ---~~vpq~~iL~~~~~~~~i~HgG~~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~G~G~~~~~~~~~~~~~~~~~~ 420 (468)
+|.+...++.++-+ ++|-.|. -.-||-..|+|.+++=...++|. + +++ |.-+.+ ..+.+.
T Consensus 268 ~pl~~~~f~~L~~~a~~--iltDSGg-iqEEAp~lg~Pvl~lR~~TERPE---~-v~a-gt~~lv---------g~~~~~ 330 (383)
T COG0381 268 DPLGYLDFHNLMKNAFL--ILTDSGG-IQEEAPSLGKPVLVLRDTTERPE---G-VEA-GTNILV---------GTDEEN 330 (383)
T ss_pred CCcchHHHHHHHHhceE--EEecCCc-hhhhHHhcCCcEEeeccCCCCcc---c-eec-CceEEe---------CccHHH
Confidence 67888889999988 9998874 56789999999999999999988 2 344 544444 446799
Q ss_pred HHHHHHHHhcCcHHHHHHHHH
Q 045570 421 IESAVRCLMDGENKIRKKVKE 441 (468)
Q Consensus 421 l~~av~~vl~~~~~~~~~a~~ 441 (468)
+.+++.++++ +++..+|.+.
T Consensus 331 i~~~~~~ll~-~~~~~~~m~~ 350 (383)
T COG0381 331 ILDAATELLE-DEEFYERMSN 350 (383)
T ss_pred HHHHHHHHhh-ChHHHHHHhc
Confidence 9999999999 6777766544
No 97
>PRK15179 Vi polysaccharide biosynthesis protein TviE; Provisional
Probab=97.61 E-value=0.13 Score=54.29 Aligned_cols=93 Identities=24% Similarity=0.233 Sum_probs=61.4
Q ss_pred cCCeEEEEeccHH-Hhhhccccceeee---ccC-chhHHHHHhcCCcEEeccCccccchhHHHHHhhhceEEEeeecccc
Q 045570 337 KGRGMIWGWVPQV-EILAHKAIGGFVS---HCG-WNSILESLWYGVPIATWPIYAEQQLNAFRMVKELGLALDLRLDYRV 411 (468)
Q Consensus 337 ~~~~~v~~~vpq~-~iL~~~~~~~~i~---HgG-~~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~G~G~~~~~~~~~ 411 (468)
.+++.+.+|.++. .+|..+++ ||. +.| -++++||+.+|+|+|+....+ ....+.+. ..|+.++.
T Consensus 573 ~~~V~flG~~~dv~~ll~aaDv--~VlpS~~Egfp~vlLEAMA~G~PVVat~~gG----~~EiV~dg-~~GlLv~~---- 641 (694)
T PRK15179 573 GERILFTGLSRRVGYWLTQFNA--FLLLSRFEGLPNVLIEAQFSGVPVVTTLAGG----AGEAVQEG-VTGLTLPA---- 641 (694)
T ss_pred CCcEEEcCCcchHHHHHHhcCE--EEeccccccchHHHHHHHHcCCeEEEECCCC----hHHHccCC-CCEEEeCC----
Confidence 4678888887753 38888888 664 444 568999999999999976532 33333333 46777762
Q ss_pred CCcccChhHHHHHHHHHhcC---cHHHHHHHHHH
Q 045570 412 GSDLVMAGDIESAVRCLMDG---ENKIRKKVKEM 442 (468)
Q Consensus 412 ~~~~~~~~~l~~av~~vl~~---~~~~~~~a~~l 442 (468)
+..+.+++.+++.+++.. ++.+++++++.
T Consensus 642 --~d~~~~~La~aL~~ll~~l~~~~~l~~~ar~~ 673 (694)
T PRK15179 642 --DTVTAPDVAEALARIHDMCAADPGIARKAADW 673 (694)
T ss_pred --CCCChHHHHHHHHHHHhChhccHHHHHHHHHH
Confidence 355666777777666541 45666655443
No 98
>PLN02949 transferase, transferring glycosyl groups
Probab=97.61 E-value=0.1 Score=52.73 Aligned_cols=85 Identities=8% Similarity=-0.022 Sum_probs=53.2
Q ss_pred cCCeEEEEeccHHH---hhhccccceeee---ccCch-hHHHHHhcCCcEEeccCccccchhHHHHHhhhceEEEeeecc
Q 045570 337 KGRGMIWGWVPQVE---ILAHKAIGGFVS---HCGWN-SILESLWYGVPIATWPIYAEQQLNAFRMVKELGLALDLRLDY 409 (468)
Q Consensus 337 ~~~~~v~~~vpq~~---iL~~~~~~~~i~---HgG~~-s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~G~G~~~~~~~ 409 (468)
.+++.+.+++|+.+ +|..+++ +|+ +=|+| ++.||+++|+|.|+....+--.+...- ...-..|...
T Consensus 334 ~~~V~f~g~v~~~el~~ll~~a~~--~v~~s~~E~FGivvlEAMA~G~PVIa~~~gGp~~eIV~~-~~~g~tG~l~---- 406 (463)
T PLN02949 334 DGDVEFHKNVSYRDLVRLLGGAVA--GLHSMIDEHFGISVVEYMAAGAVPIAHNSAGPKMDIVLD-EDGQQTGFLA---- 406 (463)
T ss_pred CCcEEEeCCCCHHHHHHHHHhCcE--EEeCCccCCCChHHHHHHHcCCcEEEeCCCCCcceeeec-CCCCcccccC----
Confidence 46788889998665 5777877 663 23334 799999999999998654311000000 0000123221
Q ss_pred ccCCcccChhHHHHHHHHHhcCcHH
Q 045570 410 RVGSDLVMAGDIESAVRCLMDGENK 434 (468)
Q Consensus 410 ~~~~~~~~~~~l~~av~~vl~~~~~ 434 (468)
-+.+++.+++.+++++++.
T Consensus 407 ------~~~~~la~ai~~ll~~~~~ 425 (463)
T PLN02949 407 ------TTVEEYADAILEVLRMRET 425 (463)
T ss_pred ------CCHHHHHHHHHHHHhCCHH
Confidence 1789999999999973343
No 99
>cd03792 GT1_Trehalose_phosphorylase Trehalose phosphorylase (TP) reversibly catalyzes trehalose synthesis and degradation from alpha-glucose-1-phosphate (alpha-Glc-1-P) and glucose. The catalyzing activity includes the phosphorolysis of trehalose, which produce alpha-Glc-1-P and glucose, and the subsequent synthesis of trehalose. This family is most closely related to the GT1 family of glycosyltransferases.
Probab=97.57 E-value=0.093 Score=51.48 Aligned_cols=108 Identities=11% Similarity=0.221 Sum_probs=64.4
Q ss_pred cCCeEEEEec--cHH---Hhhhccccceeeecc---C-chhHHHHHhcCCcEEeccCccccchhHHHHHhhhceEEEeee
Q 045570 337 KGRGMIWGWV--PQV---EILAHKAIGGFVSHC---G-WNSILESLWYGVPIATWPIYAEQQLNAFRMVKELGLALDLRL 407 (468)
Q Consensus 337 ~~~~~v~~~v--pq~---~iL~~~~~~~~i~Hg---G-~~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~G~G~~~~~ 407 (468)
.+++.+.++. ++. .++..+++ |+.-. | -.++.||+++|+|+|+....+ ....+... ..|..++
T Consensus 251 ~~~v~~~~~~~~~~~~~~~~~~~ad~--~v~~s~~Eg~g~~~lEA~a~G~Pvv~s~~~~----~~~~i~~~-~~g~~~~- 322 (372)
T cd03792 251 DPDIHVLTLPPVSDLEVNALQRASTV--VLQKSIREGFGLTVTEALWKGKPVIAGPVGG----IPLQIEDG-ETGFLVD- 322 (372)
T ss_pred CCCeEEEecCCCCHHHHHHHHHhCeE--EEeCCCccCCCHHHHHHHHcCCCEEEcCCCC----chhhcccC-CceEEeC-
Confidence 3567777776 433 46778888 77543 2 349999999999999876432 23333333 5566443
Q ss_pred ccccCCcccChhHHHHHHHHHhcCcHHHHHHHHHHHHHHHHhhhcCCChHHHHHHHHH
Q 045570 408 DYRVGSDLVMAGDIESAVRCLMDGENKIRKKVKEMAEISRKSLMEGGSSFNSIGQFIS 465 (468)
Q Consensus 408 ~~~~~~~~~~~~~l~~av~~vl~~~~~~~~~a~~l~~~~~~~~~~gg~~~~~~~~~~~ 465 (468)
+.+.+..++.++++ +++.++...+ ..++.+.+.-+-...++++++
T Consensus 323 ---------~~~~~a~~i~~ll~-~~~~~~~~~~---~a~~~~~~~~s~~~~~~~~~~ 367 (372)
T cd03792 323 ---------TVEEAAVRILYLLR-DPELRRKMGA---NAREHVRENFLITRHLKDYLY 367 (372)
T ss_pred ---------CcHHHHHHHHHHHc-CHHHHHHHHH---HHHHHHHHHcCHHHHHHHHHH
Confidence 35677889999998 6655543322 222222223444445555544
No 100
>PF13844 Glyco_transf_41: Glycosyl transferase family 41; PDB: 3PE4_C 3PE3_D 3TAX_C 2XGO_A 2JLB_B 2XGM_A 2VSY_B 2XGS_B 2VSN_A.
Probab=97.57 E-value=0.0023 Score=63.31 Aligned_cols=145 Identities=22% Similarity=0.257 Sum_probs=77.5
Q ss_pred CCcEEEEeccCccccCHHHHHHHHHHHHhCCCcEEEEEecCCCCCccccccccCCCCCCchhHHHH--hcCCeEEEEecc
Q 045570 270 ESSVVFLCFGSSGSFDVAQVKEIAIGLERSGYNFLWSLRVSSPKDEVSAHRYVTNNGVFPEGFLER--IKGRGMIWGWVP 347 (468)
Q Consensus 270 ~~~vv~vs~GS~~~~~~~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~--~~~~~~v~~~vp 347 (468)
+..++|.||.+....+++.+..-++.|++.+...+|..+.... + ...+-..+.+. .++++.+.++.|
T Consensus 283 ~d~vvF~~fn~~~KI~p~~l~~W~~IL~~vP~S~L~L~~~~~~-~----------~~~l~~~~~~~Gv~~~Ri~f~~~~~ 351 (468)
T PF13844_consen 283 EDAVVFGSFNNLFKISPETLDLWARILKAVPNSRLWLLRFPAS-G----------EARLRRRFAAHGVDPDRIIFSPVAP 351 (468)
T ss_dssp SSSEEEEE-S-GGG--HHHHHHHHHHHHHSTTEEEEEEETSTT-H----------HHHHHHHHHHTTS-GGGEEEEE---
T ss_pred CCceEEEecCccccCCHHHHHHHHHHHHhCCCcEEEEeeCCHH-H----------HHHHHHHHHHcCCChhhEEEcCCCC
Confidence 3459999999999999999999999999999999998875421 0 01111112111 235777778877
Q ss_pred HHHh---hhccccceee---eccCchhHHHHHhcCCcEEeccCccccchhHHHHHhhhceEEEeeeccccCCcccChhH-
Q 045570 348 QVEI---LAHKAIGGFV---SHCGWNSILESLWYGVPIATWPIYAEQQLNAFRMVKELGLALDLRLDYRVGSDLVMAGD- 420 (468)
Q Consensus 348 q~~i---L~~~~~~~~i---~HgG~~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~G~G~~~~~~~~~~~~~~~~~~- 420 (468)
+.+- +..+|+ ++ ..+|.+|++|||+.|||+|.+|--.=.-..+..+-..+|+.-.+ .-++++
T Consensus 352 ~~ehl~~~~~~DI--~LDT~p~nG~TTt~dALwmGVPvVTl~G~~~~sR~~aSiL~~lGl~ElI---------A~s~~eY 420 (468)
T PF13844_consen 352 REEHLRRYQLADI--CLDTFPYNGGTTTLDALWMGVPVVTLPGETMASRVGASILRALGLPELI---------ADSEEEY 420 (468)
T ss_dssp HHHHHHHGGG-SE--EE--SSS--SHHHHHHHHHT--EEB---SSGGGSHHHHHHHHHT-GGGB----------SSHHHH
T ss_pred HHHHHHHhhhCCE--EeeCCCCCCcHHHHHHHHcCCCEEeccCCCchhHHHHHHHHHcCCchhc---------CCCHHHH
Confidence 6554 445666 44 45788999999999999999995433333333333334665322 224444
Q ss_pred HHHHHHHHhcCcHHHHHH
Q 045570 421 IESAVRCLMDGENKIRKK 438 (468)
Q Consensus 421 l~~av~~vl~~~~~~~~~ 438 (468)
+..|+ ++-+ |++++++
T Consensus 421 v~~Av-~La~-D~~~l~~ 436 (468)
T PF13844_consen 421 VEIAV-RLAT-DPERLRA 436 (468)
T ss_dssp HHHHH-HHHH--HHHHHH
T ss_pred HHHHH-HHhC-CHHHHHH
Confidence 55555 4555 5655544
No 101
>PRK15427 colanic acid biosynthesis glycosyltransferase WcaL; Provisional
Probab=97.57 E-value=0.0049 Score=61.31 Aligned_cols=111 Identities=11% Similarity=0.071 Sum_probs=71.2
Q ss_pred cCCeEEEEeccHHH---hhhccccceeeec---------cCc-hhHHHHHhcCCcEEeccCccccchhHHHHHhhhceEE
Q 045570 337 KGRGMIWGWVPQVE---ILAHKAIGGFVSH---------CGW-NSILESLWYGVPIATWPIYAEQQLNAFRMVKELGLAL 403 (468)
Q Consensus 337 ~~~~~v~~~vpq~~---iL~~~~~~~~i~H---------gG~-~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~G~G~ 403 (468)
.+++.+.+|+|+.+ ++..+++ ||.- -|. ++++||+++|+|+|+-...+ ....+.+. ..|.
T Consensus 278 ~~~V~~~G~~~~~el~~~l~~aDv--~v~pS~~~~~g~~Eg~p~~llEAma~G~PVI~t~~~g----~~E~v~~~-~~G~ 350 (406)
T PRK15427 278 EDVVEMPGFKPSHEVKAMLDDADV--FLLPSVTGADGDMEGIPVALMEAMAVGIPVVSTLHSG----IPELVEAD-KSGW 350 (406)
T ss_pred CCeEEEeCCCCHHHHHHHHHhCCE--EEECCccCCCCCccCccHHHHHHHhCCCCEEEeCCCC----chhhhcCC-CceE
Confidence 46788889999865 6778888 6642 244 57899999999999975543 33333333 4677
Q ss_pred EeeeccccCCcccChhHHHHHHHHHhcCcHHHHHHHHHHHHHHHHhhhcCCChHHHHHHHHH
Q 045570 404 DLRLDYRVGSDLVMAGDIESAVRCLMDGENKIRKKVKEMAEISRKSLMEGGSSFNSIGQFIS 465 (468)
Q Consensus 404 ~~~~~~~~~~~~~~~~~l~~av~~vl~~~~~~~~~a~~l~~~~~~~~~~gg~~~~~~~~~~~ 465 (468)
.++ .-+.+++.++|.++++.|++.++ ++++..++.+...-+.....+++.+
T Consensus 351 lv~--------~~d~~~la~ai~~l~~~d~~~~~---~~~~~ar~~v~~~f~~~~~~~~l~~ 401 (406)
T PRK15427 351 LVP--------ENDAQALAQRLAAFSQLDTDELA---PVVKRAREKVETDFNQQVINRELAS 401 (406)
T ss_pred EeC--------CCCHHHHHHHHHHHHhCCHHHHH---HHHHHHHHHHHHhcCHHHHHHHHHH
Confidence 665 44789999999999873344332 2333333333334455555555544
No 102
>cd03804 GT1_wbaZ_like This family is most closely related to the GT1 family of glycosyltransferases. wbaZ in Salmonella enterica has been shown to possess the mannosyl transferase activity. The members of this family are found in certain bacteria and Archaea.
Probab=97.54 E-value=0.00053 Score=66.75 Aligned_cols=133 Identities=10% Similarity=0.063 Sum_probs=84.5
Q ss_pred EEEeccCccccCHHHHHHHHHHHHhCCCcEEEEEecCCCCCccccccccCCCCCCchhHHHHhcCCeEEEEeccHHH---
Q 045570 274 VFLCFGSSGSFDVAQVKEIAIGLERSGYNFLWSLRVSSPKDEVSAHRYVTNNGVFPEGFLERIKGRGMIWGWVPQVE--- 350 (468)
Q Consensus 274 v~vs~GS~~~~~~~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~v~~~vpq~~--- 350 (468)
.++..|++.. ...+..++++++..+.++++. |.+. ..+.+.+...+|+.+.+++|+.+
T Consensus 197 ~il~~G~~~~--~K~~~~li~a~~~~~~~l~iv-G~g~----------------~~~~l~~~~~~~V~~~g~~~~~~~~~ 257 (351)
T cd03804 197 YYLSVGRLVP--YKRIDLAIEAFNKLGKRLVVI-GDGP----------------ELDRLRAKAGPNVTFLGRVSDEELRD 257 (351)
T ss_pred EEEEEEcCcc--ccChHHHHHHHHHCCCcEEEE-ECCh----------------hHHHHHhhcCCCEEEecCCCHHHHHH
Confidence 3445566542 233666778887777776554 4321 11223334567899999999854
Q ss_pred hhhccccceeeeccCc-hhHHHHHhcCCcEEeccCccccchhHHHHHhhhceEEEeeeccccCCcccChhHHHHHHHHHh
Q 045570 351 ILAHKAIGGFVSHCGW-NSILESLWYGVPIATWPIYAEQQLNAFRMVKELGLALDLRLDYRVGSDLVMAGDIESAVRCLM 429 (468)
Q Consensus 351 iL~~~~~~~~i~HgG~-~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~G~G~~~~~~~~~~~~~~~~~~l~~av~~vl 429 (468)
++..+++-++-+.-|+ .++.||+++|+|+|+....+ ....+.+. +.|..++ .-+.+++.++|.+++
T Consensus 258 ~~~~ad~~v~ps~e~~g~~~~Eama~G~Pvi~~~~~~----~~e~i~~~-~~G~~~~--------~~~~~~la~~i~~l~ 324 (351)
T cd03804 258 LYARARAFLFPAEEDFGIVPVEAMASGTPVIAYGKGG----ALETVIDG-VTGILFE--------EQTVESLAAAVERFE 324 (351)
T ss_pred HHHhCCEEEECCcCCCCchHHHHHHcCCCEEEeCCCC----CcceeeCC-CCEEEeC--------CCCHHHHHHHHHHHH
Confidence 6788888332233444 36789999999999986543 22333443 5777765 347888999999999
Q ss_pred cCcH-HHHHHH
Q 045570 430 DGEN-KIRKKV 439 (468)
Q Consensus 430 ~~~~-~~~~~a 439 (468)
+ |+ ..++++
T Consensus 325 ~-~~~~~~~~~ 334 (351)
T cd03804 325 K-NEDFDPQAI 334 (351)
T ss_pred h-CcccCHHHH
Confidence 8 55 344433
No 103
>PRK00654 glgA glycogen synthase; Provisional
Probab=97.51 E-value=0.096 Score=53.20 Aligned_cols=83 Identities=17% Similarity=0.147 Sum_probs=52.0
Q ss_pred cCCeEE-EEeccHH--Hhhhccccceeeec---cCch-hHHHHHhcCCcEEeccCcc--ccchhHHHHHhhhceEEEeee
Q 045570 337 KGRGMI-WGWVPQV--EILAHKAIGGFVSH---CGWN-SILESLWYGVPIATWPIYA--EQQLNAFRMVKELGLALDLRL 407 (468)
Q Consensus 337 ~~~~~v-~~~vpq~--~iL~~~~~~~~i~H---gG~~-s~~eal~~GvP~v~~P~~~--DQ~~na~~~~~~~G~G~~~~~ 407 (468)
+.++.+ .+|-.+. .++..+++ ||.- -|+| +.+||+++|+|.|+.-..+ |.-.+...-.+. +.|..++
T Consensus 336 ~~~v~~~~g~~~~~~~~~~~~aDv--~v~PS~~E~~gl~~lEAma~G~p~V~~~~gG~~e~v~~~~~~~~~-~~G~lv~- 411 (466)
T PRK00654 336 PGKVGVQIGYDEALAHRIYAGADM--FLMPSRFEPCGLTQLYALRYGTLPIVRRTGGLADTVIDYNPEDGE-ATGFVFD- 411 (466)
T ss_pred CCcEEEEEeCCHHHHHHHHhhCCE--EEeCCCCCCchHHHHHHHHCCCCEEEeCCCCccceeecCCCCCCC-CceEEeC-
Confidence 345543 3663332 47888998 7643 3444 8899999999999875432 221111110222 6677766
Q ss_pred ccccCCcccChhHHHHHHHHHhc
Q 045570 408 DYRVGSDLVMAGDIESAVRCLMD 430 (468)
Q Consensus 408 ~~~~~~~~~~~~~l~~av~~vl~ 430 (468)
.-+++++.+++.++++
T Consensus 412 -------~~d~~~la~~i~~~l~ 427 (466)
T PRK00654 412 -------DFNAEDLLRALRRALE 427 (466)
T ss_pred -------CCCHHHHHHHHHHHHH
Confidence 4478999999999875
No 104
>PF00534 Glycos_transf_1: Glycosyl transferases group 1; InterPro: IPR001296 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Proteins containign this domain transfer UDP, ADP, GDP or CMP linked sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. The bacterial enzymes are involved in various biosynthetic processes that include exopolysaccharide biosynthesis, lipopolysaccharide core biosynthesis and the biosynthesis of the slime polysaccaride colanic acid. Mutations in this domain of the human N-acetylglucosaminyl-phosphatidylinositol biosynthetic protein are the cause of paroxysmal nocturnal hemoglobinuria (PNH), an acquired hemolytic blood disorder characterised by venous thrombosis, erythrocyte hemolysis, infections and defective hematopoiesis.; GO: 0009058 biosynthetic process; PDB: 2L7C_A 2IV3_B 2IUY_B 2XA9_A 2XA1_B 2X6R_A 2XMP_B 2XA2_B 2X6Q_A 3QHP_B ....
Probab=97.50 E-value=0.002 Score=55.53 Aligned_cols=89 Identities=21% Similarity=0.244 Sum_probs=63.8
Q ss_pred hcCCeEEEEeccH---HHhhhccccceeeec----cCchhHHHHHhcCCcEEeccCccccchhHHHHHhhhceEEEeeec
Q 045570 336 IKGRGMIWGWVPQ---VEILAHKAIGGFVSH----CGWNSILESLWYGVPIATWPIYAEQQLNAFRMVKELGLALDLRLD 408 (468)
Q Consensus 336 ~~~~~~v~~~vpq---~~iL~~~~~~~~i~H----gG~~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~G~G~~~~~~ 408 (468)
...++.+.+++++ ..++..+++ +|+. +...++.||+.+|+|+|+.- ...+...+.+. +.|..++
T Consensus 71 ~~~~i~~~~~~~~~~l~~~~~~~di--~v~~s~~e~~~~~~~Ea~~~g~pvI~~~----~~~~~e~~~~~-~~g~~~~-- 141 (172)
T PF00534_consen 71 LKENIIFLGYVPDDELDELYKSSDI--FVSPSRNEGFGLSLLEAMACGCPVIASD----IGGNNEIINDG-VNGFLFD-- 141 (172)
T ss_dssp CGTTEEEEESHSHHHHHHHHHHTSE--EEE-BSSBSS-HHHHHHHHTT-EEEEES----STHHHHHSGTT-TSEEEES--
T ss_pred cccccccccccccccccccccccee--ccccccccccccccccccccccceeecc----ccCCceeeccc-cceEEeC--
Confidence 3467888999873 347888888 7776 56779999999999999853 45555554454 6688776
Q ss_pred cccCCcccChhHHHHHHHHHhcCcHHHHHHHH
Q 045570 409 YRVGSDLVMAGDIESAVRCLMDGENKIRKKVK 440 (468)
Q Consensus 409 ~~~~~~~~~~~~l~~av~~vl~~~~~~~~~a~ 440 (468)
..+.+++.++|.++++ +++.+++..
T Consensus 142 ------~~~~~~l~~~i~~~l~-~~~~~~~l~ 166 (172)
T PF00534_consen 142 ------PNDIEELADAIEKLLN-DPELRQKLG 166 (172)
T ss_dssp ------TTSHHHHHHHHHHHHH-HHHHHHHHH
T ss_pred ------CCCHHHHHHHHHHHHC-CHHHHHHHH
Confidence 4499999999999999 665554433
No 105
>PRK15484 lipopolysaccharide 1,2-N-acetylglucosaminetransferase; Provisional
Probab=97.47 E-value=0.0079 Score=59.29 Aligned_cols=85 Identities=13% Similarity=0.111 Sum_probs=59.5
Q ss_pred hcCCeEEEEeccHHH---hhhccccceeeec----cCc-hhHHHHHhcCCcEEeccCccccchhHHHHHhhhceEEEeee
Q 045570 336 IKGRGMIWGWVPQVE---ILAHKAIGGFVSH----CGW-NSILESLWYGVPIATWPIYAEQQLNAFRMVKELGLALDLRL 407 (468)
Q Consensus 336 ~~~~~~v~~~vpq~~---iL~~~~~~~~i~H----gG~-~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~G~G~~~~~ 407 (468)
...++.+.+++|+.+ ++..+++ ||.. -|+ .+++||+++|+|+|+....+ +...+.+. ..|..+..
T Consensus 255 l~~~v~~~G~~~~~~l~~~~~~aDv--~v~pS~~~E~f~~~~lEAma~G~PVI~s~~gg----~~Eiv~~~-~~G~~l~~ 327 (380)
T PRK15484 255 IGDRCIMLGGQPPEKMHNYYPLADL--VVVPSQVEEAFCMVAVEAMAAGKPVLASTKGG----ITEFVLEG-ITGYHLAE 327 (380)
T ss_pred cCCcEEEeCCCCHHHHHHHHHhCCE--EEeCCCCccccccHHHHHHHcCCCEEEeCCCC----cHhhcccC-CceEEEeC
Confidence 345778889998655 5888888 6653 333 57789999999999986533 33333333 56764431
Q ss_pred ccccCCcccChhHHHHHHHHHhcCcHHH
Q 045570 408 DYRVGSDLVMAGDIESAVRCLMDGENKI 435 (468)
Q Consensus 408 ~~~~~~~~~~~~~l~~av~~vl~~~~~~ 435 (468)
..+.+++.++|.++++ |++.
T Consensus 328 -------~~d~~~la~~I~~ll~-d~~~ 347 (380)
T PRK15484 328 -------PMTSDSIISDINRTLA-DPEL 347 (380)
T ss_pred -------CCCHHHHHHHHHHHHc-CHHH
Confidence 4578999999999998 6654
No 106
>COG5017 Uncharacterized conserved protein [Function unknown]
Probab=97.43 E-value=0.0022 Score=51.07 Aligned_cols=107 Identities=20% Similarity=0.210 Sum_probs=67.2
Q ss_pred EEEeccCccccCHHHHH--HHHHHHHhCCCcEEEEEecCCCCCccccccccCCCCCCchhHHHHhcCCeEEEEe--ccH-
Q 045570 274 VFLCFGSSGSFDVAQVK--EIAIGLERSGYNFLWSLRVSSPKDEVSAHRYVTNNGVFPEGFLERIKGRGMIWGW--VPQ- 348 (468)
Q Consensus 274 v~vs~GS~~~~~~~~~~--~~~~al~~~~~~~iw~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~v~~~--vpq- 348 (468)
+||+-||....-...+. ++..-.+.-..++|..+|.+. ..| +.+ .++.+| .+-
T Consensus 2 ifVTvGstf~~f~rlv~k~e~~el~~~i~e~lIvQyGn~d---------------~kp------vag-l~v~~F~~~~ki 59 (161)
T COG5017 2 IFVTVGSTFYPFNRLVLKIEVLELTELIQEELIVQYGNGD---------------IKP------VAG-LRVYGFDKEEKI 59 (161)
T ss_pred eEEEecCccchHHHHHhhHHHHHHHHHhhhheeeeecCCC---------------ccc------ccc-cEEEeechHHHH
Confidence 68899997321111111 122222334568899998752 122 112 244444 342
Q ss_pred HHhhhccccceeeeccCchhHHHHHhcCCcEEeccCc--------cccchhHHHHHhhhceEEEe
Q 045570 349 VEILAHKAIGGFVSHCGWNSILESLWYGVPIATWPIY--------AEQQLNAFRMVKELGLALDL 405 (468)
Q Consensus 349 ~~iL~~~~~~~~i~HgG~~s~~eal~~GvP~v~~P~~--------~DQ~~na~~~~~~~G~G~~~ 405 (468)
+.+...+++ +|+|||.||++.++.-++|.|++|-. ..|-..|..+++. +.=+..
T Consensus 60 Qsli~darI--VISHaG~GSIL~~~rl~kplIv~pr~s~y~elvDdHQvela~klae~-~~vv~~ 121 (161)
T COG5017 60 QSLIHDARI--VISHAGEGSILLLLRLDKPLIVVPRSSQYQELVDDHQVELALKLAEI-NYVVAC 121 (161)
T ss_pred HHHhhcceE--EEeccCcchHHHHhhcCCcEEEEECchhHHHhhhhHHHHHHHHHHhc-CceEEE
Confidence 335555666 99999999999999999999999964 3588888888775 554443
No 107
>PLN02846 digalactosyldiacylglycerol synthase
Probab=97.29 E-value=0.24 Score=49.68 Aligned_cols=72 Identities=10% Similarity=-0.075 Sum_probs=50.7
Q ss_pred EEEeccHHHhhhccccceeeec----cCchhHHHHHhcCCcEEeccCccccchhHHHHHhhhceEEEeeeccccCCcccC
Q 045570 342 IWGWVPQVEILAHKAIGGFVSH----CGWNSILESLWYGVPIATWPIYAEQQLNAFRMVKELGLALDLRLDYRVGSDLVM 417 (468)
Q Consensus 342 v~~~vpq~~iL~~~~~~~~i~H----gG~~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~G~G~~~~~~~~~~~~~~~ 417 (468)
+.++.+..+++...++ ||.- +=.++++||+++|+|+|+.-..+ + ..+.+. +-|...+ +
T Consensus 288 f~G~~~~~~~~~~~Dv--Fv~pS~~Et~g~v~lEAmA~G~PVVa~~~~~----~-~~v~~~-~ng~~~~----------~ 349 (462)
T PLN02846 288 YPGRDHADPLFHDYKV--FLNPSTTDVVCTTTAEALAMGKIVVCANHPS----N-EFFKQF-PNCRTYD----------D 349 (462)
T ss_pred ECCCCCHHHHHHhCCE--EEECCCcccchHHHHHHHHcCCcEEEecCCC----c-ceeecC-CceEecC----------C
Confidence 3366667779999998 8876 34578999999999999986543 2 222222 4444332 5
Q ss_pred hhHHHHHHHHHhcC
Q 045570 418 AGDIESAVRCLMDG 431 (468)
Q Consensus 418 ~~~l~~av~~vl~~ 431 (468)
.+++.+++.++|++
T Consensus 350 ~~~~a~ai~~~l~~ 363 (462)
T PLN02846 350 GKGFVRATLKALAE 363 (462)
T ss_pred HHHHHHHHHHHHcc
Confidence 77999999999973
No 108
>PRK09922 UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D-galactosyltransferase; Provisional
Probab=97.17 E-value=0.0097 Score=58.16 Aligned_cols=133 Identities=16% Similarity=0.097 Sum_probs=77.3
Q ss_pred EEEEeccCccccCHHHHHHHHHHHHhCC--CcEEEEEecCCCCCccccccccCCCCCCchhHHH-HhcCCeEEEEeccH-
Q 045570 273 VVFLCFGSSGSFDVAQVKEIAIGLERSG--YNFLWSLRVSSPKDEVSAHRYVTNNGVFPEGFLE-RIKGRGMIWGWVPQ- 348 (468)
Q Consensus 273 vv~vs~GS~~~~~~~~~~~~~~al~~~~--~~~iw~~~~~~~~~~~~~~~~~~~~~~lp~~~~~-~~~~~~~v~~~vpq- 348 (468)
.+++..|.+.......+..+++++.... .+++ .+|.+. . .+.+-+-..+ ..++++.+.+|+++
T Consensus 181 ~~i~~~Grl~~~~~k~~~~l~~a~~~~~~~~~l~-ivG~g~-~-----------~~~l~~~~~~~~l~~~v~f~G~~~~~ 247 (359)
T PRK09922 181 AVFLYVGRLKFEGQKNVKELFDGLSQTTGEWQLH-IIGDGS-D-----------FEKCKAYSRELGIEQRIIWHGWQSQP 247 (359)
T ss_pred cEEEEEEEEecccCcCHHHHHHHHHhhCCCeEEE-EEeCCc-c-----------HHHHHHHHHHcCCCCeEEEecccCCc
Confidence 5566777764322334666777776643 3433 334321 0 0111111111 12467888898753
Q ss_pred -HH---hhhccccceeeec----cCchhHHHHHhcCCcEEecc-CccccchhHHHHHhhhceEEEeeeccccCCcccChh
Q 045570 349 -VE---ILAHKAIGGFVSH----CGWNSILESLWYGVPIATWP-IYAEQQLNAFRMVKELGLALDLRLDYRVGSDLVMAG 419 (468)
Q Consensus 349 -~~---iL~~~~~~~~i~H----gG~~s~~eal~~GvP~v~~P-~~~DQ~~na~~~~~~~G~G~~~~~~~~~~~~~~~~~ 419 (468)
.. .+..+++ +|.. |--.++.||+++|+|+|+.- ..+ ....+.+. ..|..++ .-+.+
T Consensus 248 ~~~~~~~~~~~d~--~v~~s~~Egf~~~~lEAma~G~Pvv~s~~~~g----~~eiv~~~-~~G~lv~--------~~d~~ 312 (359)
T PRK09922 248 WEVVQQKIKNVSA--LLLTSKFEGFPMTLLEAMSYGIPCISSDCMSG----PRDIIKPG-LNGELYT--------PGNID 312 (359)
T ss_pred HHHHHHHHhcCcE--EEECCcccCcChHHHHHHHcCCCEEEeCCCCC----hHHHccCC-CceEEEC--------CCCHH
Confidence 33 3455677 6643 22579999999999999875 332 22233333 5676665 45899
Q ss_pred HHHHHHHHHhcCcHH
Q 045570 420 DIESAVRCLMDGENK 434 (468)
Q Consensus 420 ~l~~av~~vl~~~~~ 434 (468)
++.++|.++++ |+.
T Consensus 313 ~la~~i~~l~~-~~~ 326 (359)
T PRK09922 313 EFVGKLNKVIS-GEV 326 (359)
T ss_pred HHHHHHHHHHh-Ccc
Confidence 99999999998 554
No 109
>PF13692 Glyco_trans_1_4: Glycosyl transferases group 1; PDB: 3OY2_A 3OY7_B 2Q6V_A 2HY7_A 3CV3_A 3CUY_A.
Probab=97.15 E-value=0.0031 Score=51.84 Aligned_cols=79 Identities=22% Similarity=0.246 Sum_probs=48.8
Q ss_pred cCCeEEEEeccH-HHhhhccccceeeec--cC-chhHHHHHhcCCcEEeccCccccchhHHHHHhhhceEEEeeeccccC
Q 045570 337 KGRGMIWGWVPQ-VEILAHKAIGGFVSH--CG-WNSILESLWYGVPIATWPIYAEQQLNAFRMVKELGLALDLRLDYRVG 412 (468)
Q Consensus 337 ~~~~~v~~~vpq-~~iL~~~~~~~~i~H--gG-~~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~G~G~~~~~~~~~~ 412 (468)
..++.+.+|++. ..++..+++....+. -| -+++.|++.+|+|+|+.+.. ........ +.|..+.
T Consensus 52 ~~~v~~~g~~~e~~~~l~~~dv~l~p~~~~~~~~~k~~e~~~~G~pvi~~~~~-----~~~~~~~~-~~~~~~~------ 119 (135)
T PF13692_consen 52 RPNVRFHGFVEELPEILAAADVGLIPSRFNEGFPNKLLEAMAAGKPVIASDNG-----AEGIVEED-GCGVLVA------ 119 (135)
T ss_dssp HCTEEEE-S-HHHHHHHHC-SEEEE-BSS-SCC-HHHHHHHCTT--EEEEHHH-----CHCHS----SEEEE-T------
T ss_pred CCCEEEcCCHHHHHHHHHhCCEEEEEeeCCCcCcHHHHHHHHhCCCEEECCcc-----hhhheeec-CCeEEEC------
Confidence 458899999873 337889999665542 22 48999999999999998761 11122233 7776552
Q ss_pred CcccChhHHHHHHHHHhc
Q 045570 413 SDLVMAGDIESAVRCLMD 430 (468)
Q Consensus 413 ~~~~~~~~l~~av~~vl~ 430 (468)
-+++++.+++.++++
T Consensus 120 ---~~~~~l~~~i~~l~~ 134 (135)
T PF13692_consen 120 ---NDPEELAEAIERLLN 134 (135)
T ss_dssp ---T-HHHHHHHHHHHHH
T ss_pred ---CCHHHHHHHHHHHhc
Confidence 289999999999986
No 110
>cd03809 GT1_mtfB_like This family is most closely related to the GT1 family of glycosyltransferases. mtfB (mannosyltransferase B) in E. coli has been shown to direct the growth of the O9-specific polysaccharide chain. It transfers two mannoses into the position 3 of the previously synthesized polysaccharide.
Probab=97.05 E-value=0.019 Score=55.65 Aligned_cols=91 Identities=19% Similarity=0.219 Sum_probs=60.3
Q ss_pred hcCCeEEEEeccHHH---hhhccccceeeec----cCchhHHHHHhcCCcEEeccCccccchhHHHHHhhhceEEEeeec
Q 045570 336 IKGRGMIWGWVPQVE---ILAHKAIGGFVSH----CGWNSILESLWYGVPIATWPIYAEQQLNAFRMVKELGLALDLRLD 408 (468)
Q Consensus 336 ~~~~~~v~~~vpq~~---iL~~~~~~~~i~H----gG~~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~G~G~~~~~~ 408 (468)
..+++.+.+|+|+.+ +|..+++ +|.- +..+++.||+++|+|+|+-...+ ....+ . ..|..+.
T Consensus 251 ~~~~v~~~g~~~~~~~~~~~~~~d~--~l~ps~~e~~~~~~~Ea~a~G~pvI~~~~~~----~~e~~-~--~~~~~~~-- 319 (365)
T cd03809 251 LGDRVRFLGYVSDEELAALYRGARA--FVFPSLYEGFGLPVLEAMACGTPVIASNISS----LPEVA-G--DAALYFD-- 319 (365)
T ss_pred CCCeEEECCCCChhHHHHHHhhhhh--hcccchhccCCCCHHHHhcCCCcEEecCCCC----cccee-c--CceeeeC--
Confidence 346788889998764 6778887 5432 23458999999999999865532 11121 2 2244444
Q ss_pred cccCCcccChhHHHHHHHHHhcCcHHHHHHHHHHHH
Q 045570 409 YRVGSDLVMAGDIESAVRCLMDGENKIRKKVKEMAE 444 (468)
Q Consensus 409 ~~~~~~~~~~~~l~~av~~vl~~~~~~~~~a~~l~~ 444 (468)
.-+.+++.+++.++++ |+..+.+..+-+.
T Consensus 320 ------~~~~~~~~~~i~~l~~-~~~~~~~~~~~~~ 348 (365)
T cd03809 320 ------PLDPEALAAAIERLLE-DPALREELRERGL 348 (365)
T ss_pred ------CCCHHHHHHHHHHHhc-CHHHHHHHHHHHH
Confidence 3378999999999998 6766655544343
No 111
>TIGR03087 stp1 sugar transferase, PEP-CTERM/EpsH1 system associated. Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.
Probab=96.93 E-value=0.044 Score=54.35 Aligned_cols=107 Identities=21% Similarity=0.256 Sum_probs=67.8
Q ss_pred CCeEEEEeccHH-Hhhhccccceee--ec--cCc-hhHHHHHhcCCcEEeccCccccchhHHHHHhhhceEEEeeecccc
Q 045570 338 GRGMIWGWVPQV-EILAHKAIGGFV--SH--CGW-NSILESLWYGVPIATWPIYAEQQLNAFRMVKELGLALDLRLDYRV 411 (468)
Q Consensus 338 ~~~~v~~~vpq~-~iL~~~~~~~~i--~H--gG~-~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~G~G~~~~~~~~~ 411 (468)
.++.+.+++++. .++..+++ || ++ .|. +.+.||+++|+|+|+-+...+.. .... |.|+.+.
T Consensus 280 ~~V~~~G~v~~~~~~~~~adv--~v~Ps~~~eG~~~~~lEAma~G~PVV~t~~~~~~i-----~~~~-~~g~lv~----- 346 (397)
T TIGR03087 280 PGVTVTGSVADVRPYLAHAAV--AVAPLRIARGIQNKVLEAMAMAKPVVASPEAAEGI-----DALP-GAELLVA----- 346 (397)
T ss_pred CCeEEeeecCCHHHHHHhCCE--EEecccccCCcccHHHHHHHcCCCEEecCcccccc-----cccC-CcceEeC-----
Confidence 578888999854 37888998 65 32 354 36999999999999987643321 1223 5666543
Q ss_pred CCcccChhHHHHHHHHHhcCcHHHHHHHHHHHHHHHHhhhcCCChHHHHHHHHH
Q 045570 412 GSDLVMAGDIESAVRCLMDGENKIRKKVKEMAEISRKSLMEGGSSFNSIGQFIS 465 (468)
Q Consensus 412 ~~~~~~~~~l~~av~~vl~~~~~~~~~a~~l~~~~~~~~~~gg~~~~~~~~~~~ 465 (468)
-+.+++.++|.++++ |+..+++ +++..++.+.+.-+-...++++.+
T Consensus 347 ----~~~~~la~ai~~ll~-~~~~~~~---~~~~ar~~v~~~fsw~~~~~~~~~ 392 (397)
T TIGR03087 347 ----ADPADFAAAILALLA-NPAEREE---LGQAARRRVLQHYHWPRNLARLDA 392 (397)
T ss_pred ----CCHHHHHHHHHHHHc-CHHHHHH---HHHHHHHHHHHhCCHHHHHHHHHH
Confidence 278999999999998 6654433 333333333334444444444443
No 112
>cd03813 GT1_like_3 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=96.92 E-value=0.055 Score=55.08 Aligned_cols=88 Identities=15% Similarity=0.125 Sum_probs=60.9
Q ss_pred cCCeEEEEeccHHHhhhccccceeeec----cCchhHHHHHhcCCcEEeccCccccchhHHHHHhh----h-ceEEEeee
Q 045570 337 KGRGMIWGWVPQVEILAHKAIGGFVSH----CGWNSILESLWYGVPIATWPIYAEQQLNAFRMVKE----L-GLALDLRL 407 (468)
Q Consensus 337 ~~~~~v~~~vpq~~iL~~~~~~~~i~H----gG~~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~----~-G~G~~~~~ 407 (468)
.+++.+.+...-..++..+++ +|.- |--++++||+++|+|+|+-.. ......+.+. + ..|..++
T Consensus 353 ~~~V~f~G~~~v~~~l~~aDv--~vlpS~~Eg~p~~vlEAma~G~PVVatd~----g~~~elv~~~~~~~~g~~G~lv~- 425 (475)
T cd03813 353 EDNVKFTGFQNVKEYLPKLDV--LVLTSISEGQPLVILEAMAAGIPVVATDV----GSCRELIEGADDEALGPAGEVVP- 425 (475)
T ss_pred CCeEEEcCCccHHHHHHhCCE--EEeCchhhcCChHHHHHHHcCCCEEECCC----CChHHHhcCCcccccCCceEEEC-
Confidence 467888786666778888888 6543 334689999999999999533 3333333331 1 2676665
Q ss_pred ccccCCcccChhHHHHHHHHHhcCcHHHHHHH
Q 045570 408 DYRVGSDLVMAGDIESAVRCLMDGENKIRKKV 439 (468)
Q Consensus 408 ~~~~~~~~~~~~~l~~av~~vl~~~~~~~~~a 439 (468)
.-+.+++.+++.++++ |+..+++.
T Consensus 426 -------~~d~~~la~ai~~ll~-~~~~~~~~ 449 (475)
T cd03813 426 -------PADPEALARAILRLLK-DPELRRAM 449 (475)
T ss_pred -------CCCHHHHHHHHHHHhc-CHHHHHHH
Confidence 4578999999999998 66554443
No 113
>PRK09814 beta-1,6-galactofuranosyltransferase; Provisional
Probab=96.87 E-value=0.008 Score=58.10 Aligned_cols=111 Identities=17% Similarity=0.242 Sum_probs=76.9
Q ss_pred cCCeEEEEeccHHHhhhc--cccceeeecc-------C------chhHHHHHhcCCcEEeccCccccchhHHHHHhhhce
Q 045570 337 KGRGMIWGWVPQVEILAH--KAIGGFVSHC-------G------WNSILESLWYGVPIATWPIYAEQQLNAFRMVKELGL 401 (468)
Q Consensus 337 ~~~~~v~~~vpq~~iL~~--~~~~~~i~Hg-------G------~~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~G~ 401 (468)
.+|+.+.+|+|++++..+ .+.+++...- . -+-+.+.+++|+|+|+.+ +...+..+.+. ++
T Consensus 206 ~~~V~f~G~~~~eel~~~l~~~~gLv~~~~~~~~~~~~y~~~~~P~K~~~ymA~G~PVI~~~----~~~~~~~V~~~-~~ 280 (333)
T PRK09814 206 SANISYKGWFDPEELPNELSKGFGLVWDGDTNDGEYGEYYKYNNPHKLSLYLAAGLPVIVWS----KAAIADFIVEN-GL 280 (333)
T ss_pred CCCeEEecCCCHHHHHHHHhcCcCeEEcCCCCCccchhhhhccchHHHHHHHHCCCCEEECC----CccHHHHHHhC-Cc
Confidence 458889999998876432 1433332211 1 122777899999999964 46677777676 99
Q ss_pred EEEeeeccccCCcccChhHHHHHHHHHhcCc-HHHHHHHHHHHHHHHHhhhcCCChHHHHHHHHHh
Q 045570 402 ALDLRLDYRVGSDLVMAGDIESAVRCLMDGE-NKIRKKVKEMAEISRKSLMEGGSSFNSIGQFISL 466 (468)
Q Consensus 402 G~~~~~~~~~~~~~~~~~~l~~av~~vl~~~-~~~~~~a~~l~~~~~~~~~~gg~~~~~~~~~~~~ 466 (468)
|+.++ +.+++.+++.++..++ ..|++|++++++.++. |.--...+++++..
T Consensus 281 G~~v~----------~~~el~~~l~~~~~~~~~~m~~n~~~~~~~~~~----g~~~~~~~~~~~~~ 332 (333)
T PRK09814 281 GFVVD----------SLEELPEIIDNITEEEYQEMVENVKKISKLLRN----GYFTKKALVDAIKE 332 (333)
T ss_pred eEEeC----------CHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhc----chhHHHHHHHHHhc
Confidence 98875 4578999998764311 3688999999988885 66666677777654
No 114
>TIGR03088 stp2 sugar transferase, PEP-CTERM/EpsH1 system associated. Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.
Probab=96.83 E-value=0.066 Score=52.49 Aligned_cols=108 Identities=15% Similarity=0.051 Sum_probs=66.3
Q ss_pred CCeEEEEecc-HHHhhhccccceee--ec--cCchhHHHHHhcCCcEEeccCccccchhHHHHHhhhceEEEeeeccccC
Q 045570 338 GRGMIWGWVP-QVEILAHKAIGGFV--SH--CGWNSILESLWYGVPIATWPIYAEQQLNAFRMVKELGLALDLRLDYRVG 412 (468)
Q Consensus 338 ~~~~v~~~vp-q~~iL~~~~~~~~i--~H--gG~~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~G~G~~~~~~~~~~ 412 (468)
.++.+.++.. -..++..+++ +| ++ |--++++||+++|+|+|+-...+ +...+.+. ..|..++
T Consensus 255 ~~v~~~g~~~~~~~~~~~adi--~v~pS~~Eg~~~~~lEAma~G~Pvv~s~~~g----~~e~i~~~-~~g~~~~------ 321 (374)
T TIGR03088 255 HLVWLPGERDDVPALMQALDL--FVLPSLAEGISNTILEAMASGLPVIATAVGG----NPELVQHG-VTGALVP------ 321 (374)
T ss_pred ceEEEcCCcCCHHHHHHhcCE--EEeccccccCchHHHHHHHcCCCEEEcCCCC----cHHHhcCC-CceEEeC------
Confidence 3455555443 3458889998 66 33 34569999999999999976543 34333333 4676665
Q ss_pred CcccChhHHHHHHHHHhcCcHHHHHHHHHHHHHHHHhhhcCCChHHHHHHHH
Q 045570 413 SDLVMAGDIESAVRCLMDGENKIRKKVKEMAEISRKSLMEGGSSFNSIGQFI 464 (468)
Q Consensus 413 ~~~~~~~~l~~av~~vl~~~~~~~~~a~~l~~~~~~~~~~gg~~~~~~~~~~ 464 (468)
.-+.+++.++|.++++ ++..++. +++..++.+...-+....++++.
T Consensus 322 --~~d~~~la~~i~~l~~-~~~~~~~---~~~~a~~~~~~~fs~~~~~~~~~ 367 (374)
T TIGR03088 322 --PGDAVALARALQPYVS-DPAARRA---HGAAGRARAEQQFSINAMVAAYA 367 (374)
T ss_pred --CCCHHHHHHHHHHHHh-CHHHHHH---HHHHHHHHHHHhCCHHHHHHHHH
Confidence 4478899999999998 5544332 23333333333445444444444
No 115
>TIGR02918 accessory Sec system glycosylation protein GtfA. Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus. Members are associated with glycosylation of serine-rich glycoproteins exported by the accessory Sec system.
Probab=96.51 E-value=0.11 Score=53.17 Aligned_cols=95 Identities=9% Similarity=0.086 Sum_probs=61.0
Q ss_pred cCCeEEEEeccHHHhhhccccceeee---ccC-chhHHHHHhcCCcEEeccCccccchhHHHHHhhhceEEEeeeccccC
Q 045570 337 KGRGMIWGWVPQVEILAHKAIGGFVS---HCG-WNSILESLWYGVPIATWPIYAEQQLNAFRMVKELGLALDLRLDYRVG 412 (468)
Q Consensus 337 ~~~~~v~~~vpq~~iL~~~~~~~~i~---HgG-~~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~G~G~~~~~~~~~~ 412 (468)
.+++.+.++.+...++..+++ ||. .=| ..+++||+++|+|+|+.-..+ .+...+... .-|..++.+
T Consensus 375 ~~~V~f~G~~~~~~~~~~adv--~v~pS~~Egfgl~~lEAma~G~PVI~~dv~~---G~~eiI~~g-~nG~lv~~~---- 444 (500)
T TIGR02918 375 QDYIHLKGHRNLSEVYKDYEL--YLSASTSEGFGLTLMEAVGSGLGMIGFDVNY---GNPTFIEDN-KNGYLIPID---- 444 (500)
T ss_pred CCeEEEcCCCCHHHHHHhCCE--EEEcCccccccHHHHHHHHhCCCEEEecCCC---CCHHHccCC-CCEEEEeCC----
Confidence 356777788888889999998 665 234 358999999999999975431 122233332 456655421
Q ss_pred CcccC----hhHHHHHHHHHhcCcH---HHHHHHHHH
Q 045570 413 SDLVM----AGDIESAVRCLMDGEN---KIRKKVKEM 442 (468)
Q Consensus 413 ~~~~~----~~~l~~av~~vl~~~~---~~~~~a~~l 442 (468)
...-+ .++++++|.++++ ++ .+.+++.+.
T Consensus 445 ~~~~d~~~~~~~la~~I~~ll~-~~~~~~~~~~a~~~ 480 (500)
T TIGR02918 445 EEEDDEDQIITALAEKIVEYFN-SNDIDAFHEYSYQI 480 (500)
T ss_pred ccccchhHHHHHHHHHHHHHhC-hHHHHHHHHHHHHH
Confidence 00112 7789999999996 43 344444443
No 116
>cd04949 GT1_gtfA_like This family is most closely related to the GT1 family of glycosyltransferases and is named after gtfA in Streptococcus gordonii, where it plays a role in the O-linked glycosylation of GspB, a cell surface glycoprotein involved in platelet binding. In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltra
Probab=96.42 E-value=0.065 Score=52.52 Aligned_cols=85 Identities=12% Similarity=0.116 Sum_probs=58.3
Q ss_pred cCCeEEEEeccHHH-hhhccccceeeec--cCchhHHHHHhcCCcEEeccCccccchhHHHHHhhhceEEEeeeccccCC
Q 045570 337 KGRGMIWGWVPQVE-ILAHKAIGGFVSH--CGWNSILESLWYGVPIATWPIYAEQQLNAFRMVKELGLALDLRLDYRVGS 413 (468)
Q Consensus 337 ~~~~~v~~~vpq~~-iL~~~~~~~~i~H--gG~~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~G~G~~~~~~~~~~~ 413 (468)
.+++.+.++.++.. ++..+++-++.++ |...+++||+++|+|+|+..... .....+... ..|..++
T Consensus 260 ~~~v~~~g~~~~~~~~~~~ad~~v~~S~~Eg~~~~~lEAma~G~PvI~~~~~~---g~~~~v~~~-~~G~lv~------- 328 (372)
T cd04949 260 EDYVFLKGYTRDLDEVYQKAQLSLLTSQSEGFGLSLMEALSHGLPVISYDVNY---GPSEIIEDG-ENGYLVP------- 328 (372)
T ss_pred cceEEEcCCCCCHHHHHhhhhEEEecccccccChHHHHHHhCCCCEEEecCCC---CcHHHcccC-CCceEeC-------
Confidence 34666767666443 8888998444454 23458999999999999965431 123333443 5677665
Q ss_pred cccChhHHHHHHHHHhcCcHH
Q 045570 414 DLVMAGDIESAVRCLMDGENK 434 (468)
Q Consensus 414 ~~~~~~~l~~av~~vl~~~~~ 434 (468)
.-+.+++.++|.++++ |++
T Consensus 329 -~~d~~~la~~i~~ll~-~~~ 347 (372)
T cd04949 329 -KGDIEALAEAIIELLN-DPK 347 (372)
T ss_pred -CCcHHHHHHHHHHHHc-CHH
Confidence 4578999999999998 553
No 117
>PHA01633 putative glycosyl transferase group 1
Probab=96.21 E-value=0.23 Score=47.70 Aligned_cols=83 Identities=13% Similarity=0.150 Sum_probs=56.0
Q ss_pred cCCeEEE---EeccHH---Hhhhccccceeeec---cCc-hhHHHHHhcCCcEEeccC------cccc------chhHHH
Q 045570 337 KGRGMIW---GWVPQV---EILAHKAIGGFVSH---CGW-NSILESLWYGVPIATWPI------YAEQ------QLNAFR 394 (468)
Q Consensus 337 ~~~~~v~---~~vpq~---~iL~~~~~~~~i~H---gG~-~s~~eal~~GvP~v~~P~------~~DQ------~~na~~ 394 (468)
++++.+. +++++. .++..+++ ||.- =|+ .+++||+++|+|+|+--. .+|+ ..+...
T Consensus 200 ~~~V~f~g~~G~~~~~dl~~~y~~aDi--fV~PS~~EgfGlvlLEAMA~G~PVVas~~~~l~Ei~g~~~~~Li~~~~v~~ 277 (335)
T PHA01633 200 PANVHFVAEFGHNSREYIFAFYGAMDF--TIVPSGTEGFGMPVLESMAMGTPVIHQLMPPLDEFTSWQWNLLIKSSKVEE 277 (335)
T ss_pred CCcEEEEecCCCCCHHHHHHHHHhCCE--EEECCccccCCHHHHHHHHcCCCEEEccCCCceeecCCccceeeCCCCHHH
Confidence 4577777 455654 56788888 7763 243 478899999999998633 2343 333333
Q ss_pred HH--hhhceEEEeeeccccCCcccChhHHHHHHHHHhc
Q 045570 395 MV--KELGLALDLRLDYRVGSDLVMAGDIESAVRCLMD 430 (468)
Q Consensus 395 ~~--~~~G~G~~~~~~~~~~~~~~~~~~l~~av~~vl~ 430 (468)
.. +. |.|..++ ..+++++.+++.+++.
T Consensus 278 ~~~~~~-g~g~~~~--------~~d~~~la~ai~~~~~ 306 (335)
T PHA01633 278 YYDKEH-GQKWKIH--------KFQIEDMANAIILAFE 306 (335)
T ss_pred hcCccc-Cceeeec--------CCCHHHHHHHHHHHHh
Confidence 33 23 6676665 6799999999999954
No 118
>PLN02501 digalactosyldiacylglycerol synthase
Probab=96.09 E-value=2.3 Score=44.61 Aligned_cols=76 Identities=11% Similarity=0.003 Sum_probs=51.4
Q ss_pred eEEEEeccHH-Hhhhccccceeeecc---C-chhHHHHHhcCCcEEeccCccccchhHHHHHhhhceEEEeeeccccCCc
Q 045570 340 GMIWGWVPQV-EILAHKAIGGFVSHC---G-WNSILESLWYGVPIATWPIYAEQQLNAFRMVKELGLALDLRLDYRVGSD 414 (468)
Q Consensus 340 ~~v~~~vpq~-~iL~~~~~~~~i~Hg---G-~~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~G~G~~~~~~~~~~~~ 414 (468)
+.+.++.++. .++..+++ ||.-+ | .++++||+++|+|+|+.-..+... +... +-|...
T Consensus 603 V~FLG~~dd~~~lyasaDV--FVlPS~sEgFGlVlLEAMA~GlPVVATd~pG~e~-----V~~g-~nGll~--------- 665 (794)
T PLN02501 603 LNFLKGRDHADDSLHGYKV--FINPSISDVLCTATAEALAMGKFVVCADHPSNEF-----FRSF-PNCLTY--------- 665 (794)
T ss_pred EEecCCCCCHHHHHHhCCE--EEECCCcccchHHHHHHHHcCCCEEEecCCCCce-----Eeec-CCeEec---------
Confidence 5555676655 48999998 77632 2 468999999999999987655322 1121 223221
Q ss_pred ccChhHHHHHHHHHhcCcHH
Q 045570 415 LVMAGDIESAVRCLMDGENK 434 (468)
Q Consensus 415 ~~~~~~l~~av~~vl~~~~~ 434 (468)
-+.+++.++|.++|. ++.
T Consensus 666 -~D~EafAeAI~~LLs-d~~ 683 (794)
T PLN02501 666 -KTSEDFVAKVKEALA-NEP 683 (794)
T ss_pred -CCHHHHHHHHHHHHh-Cch
Confidence 268999999999998 443
No 119
>cd01635 Glycosyltransferase_GTB_type Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. The structures of the formed glycoconjugates are extremely diverse, reflecting a wide range of biological functions. The members of this family share a common GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=96.06 E-value=0.97 Score=40.06 Aligned_cols=49 Identities=20% Similarity=0.245 Sum_probs=35.4
Q ss_pred CCeEEEEeccH-H--H-hhhccccceeeeccC----chhHHHHHhcCCcEEeccCcccc
Q 045570 338 GRGMIWGWVPQ-V--E-ILAHKAIGGFVSHCG----WNSILESLWYGVPIATWPIYAEQ 388 (468)
Q Consensus 338 ~~~~v~~~vpq-~--~-iL~~~~~~~~i~HgG----~~s~~eal~~GvP~v~~P~~~DQ 388 (468)
.|+.+.+++++ + . ++..+++ +|+-.. .+++.||+.+|+|+|+-+..+.+
T Consensus 161 ~~v~~~~~~~~~~~~~~~~~~~di--~l~~~~~e~~~~~~~Eam~~g~pvi~s~~~~~~ 217 (229)
T cd01635 161 DRVIFLGGLDPEELLALLLAAADV--FVLPSLREGFGLVVLEAMACGLPVIATDVGGPP 217 (229)
T ss_pred ccEEEeCCCCcHHHHHHHhhcCCE--EEecccccCcChHHHHHHhCCCCEEEcCCCCcc
Confidence 46777777632 2 2 3334777 777776 78999999999999998876544
No 120
>KOG4626 consensus O-linked N-acetylglucosamine transferase OGT [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms]
Probab=95.89 E-value=0.074 Score=53.49 Aligned_cols=124 Identities=22% Similarity=0.249 Sum_probs=79.0
Q ss_pred CcEEEEeccCccccCHHHHHHHHHHHHhCCCcEEEEEecCCCCCccccccccCCCCCCchhHHH--HhcCCeEEEEeccH
Q 045570 271 SSVVFLCFGSSGSFDVAQVKEIAIGLERSGYNFLWSLRVSSPKDEVSAHRYVTNNGVFPEGFLE--RIKGRGMIWGWVPQ 348 (468)
Q Consensus 271 ~~vv~vs~GS~~~~~~~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~~~~~~~~~~~lp~~~~~--~~~~~~~v~~~vpq 348 (468)
.-+||++|-.....+++.++.-++.|.+.+-.++|..+...... ..+-....+ -.++++.+.+-+.-
T Consensus 758 d~vvf~~FNqLyKidP~~l~~W~~ILk~VPnS~LwllrfPa~ge-----------~rf~ty~~~~Gl~p~riifs~va~k 826 (966)
T KOG4626|consen 758 DAVVFCNFNQLYKIDPSTLQMWANILKRVPNSVLWLLRFPAVGE-----------QRFRTYAEQLGLEPDRIIFSPVAAK 826 (966)
T ss_pred CeEEEeechhhhcCCHHHHHHHHHHHHhCCcceeEEEeccccch-----------HHHHHHHHHhCCCccceeeccccch
Confidence 34999999988899999999999999999999999998763111 101000000 12345555444443
Q ss_pred HHhhhc---ccc--ceeeeccCchhHHHHHhcCCcEEeccCccccchhHHHHHhhhceEEEee
Q 045570 349 VEILAH---KAI--GGFVSHCGWNSILESLWYGVPIATWPIYAEQQLNAFRMVKELGLALDLR 406 (468)
Q Consensus 349 ~~iL~~---~~~--~~~i~HgG~~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~G~G~~~~ 406 (468)
.+-..+ +++ .-+.+. |..|.++.|++|||||.+|.-.---..|......+|+|-.+.
T Consensus 827 ~eHvrr~~LaDv~LDTplcn-GhTTg~dvLw~GvPmVTmpge~lAsrVa~Sll~~~Gl~hlia 888 (966)
T KOG4626|consen 827 EEHVRRGQLADVCLDTPLCN-GHTTGMDVLWAGVPMVTMPGETLASRVAASLLTALGLGHLIA 888 (966)
T ss_pred HHHHHhhhhhhhcccCcCcC-CcccchhhhccCCceeecccHHHHHHHHHHHHHHcccHHHHh
Confidence 222211 111 114444 678999999999999999986544444444444568887554
No 121
>PRK14098 glycogen synthase; Provisional
Probab=95.83 E-value=0.21 Score=51.03 Aligned_cols=83 Identities=5% Similarity=-0.101 Sum_probs=54.9
Q ss_pred hcCCeEEEEeccHH---Hhhhccccceeeecc---Cc-hhHHHHHhcCCcEEeccCccccchhHHHHHhhhceEEEeeec
Q 045570 336 IKGRGMIWGWVPQV---EILAHKAIGGFVSHC---GW-NSILESLWYGVPIATWPIYAEQQLNAFRMVKELGLALDLRLD 408 (468)
Q Consensus 336 ~~~~~~v~~~vpq~---~iL~~~~~~~~i~Hg---G~-~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~G~G~~~~~~ 408 (468)
.++++.+.++++.. .+++.+|+ |+.-. |+ .+.+||+++|+|.|+....+-.........+. +.|..++
T Consensus 360 ~~~~V~~~g~~~~~~~~~~~a~aDi--~l~PS~~E~~Gl~~lEAma~G~ppVv~~~GGl~d~v~~~~~~~-~~G~l~~-- 434 (489)
T PRK14098 360 HPEQVSVQTEFTDAFFHLAIAGLDM--LLMPGKIESCGMLQMFAMSYGTIPVAYAGGGIVETIEEVSEDK-GSGFIFH-- 434 (489)
T ss_pred CCCCEEEEEecCHHHHHHHHHhCCE--EEeCCCCCCchHHHHHHHhCCCCeEEecCCCCceeeecCCCCC-CceeEeC--
Confidence 35678888888864 58888998 77533 22 37789999999988876543211110011123 6677665
Q ss_pred cccCCcccChhHHHHHHHHHh
Q 045570 409 YRVGSDLVMAGDIESAVRCLM 429 (468)
Q Consensus 409 ~~~~~~~~~~~~l~~av~~vl 429 (468)
.-+++++.++|.+++
T Consensus 435 ------~~d~~~la~ai~~~l 449 (489)
T PRK14098 435 ------DYTPEALVAKLGEAL 449 (489)
T ss_pred ------CCCHHHHHHHHHHHH
Confidence 457899999998876
No 122
>cd04950 GT1_like_1 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center
Probab=95.69 E-value=0.33 Score=47.73 Aligned_cols=77 Identities=16% Similarity=0.041 Sum_probs=51.2
Q ss_pred CCeEEEEeccHHH---hhhccccceee------eccCc-hhHHHHHhcCCcEEeccCccccchhHHHHHhhhceEEEeee
Q 045570 338 GRGMIWGWVPQVE---ILAHKAIGGFV------SHCGW-NSILESLWYGVPIATWPIYAEQQLNAFRMVKELGLALDLRL 407 (468)
Q Consensus 338 ~~~~v~~~vpq~~---iL~~~~~~~~i------~HgG~-~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~G~G~~~~~ 407 (468)
+|+.+.+++|+.+ .+.++++..+- +.++. +.+.|++++|+|+|+.++ ... .+..+ |..+.
T Consensus 254 ~nV~~~G~~~~~~l~~~l~~~Dv~l~P~~~~~~~~~~~P~Kl~EylA~G~PVVat~~-------~~~-~~~~~-~~~~~- 323 (373)
T cd04950 254 PNVHYLGPKPYKELPAYLAGFDVAILPFRLNELTRATSPLKLFEYLAAGKPVVATPL-------PEV-RRYED-EVVLI- 323 (373)
T ss_pred CCEEEeCCCCHHHHHHHHHhCCEEecCCccchhhhcCCcchHHHHhccCCCEEecCc-------HHH-HhhcC-cEEEe-
Confidence 6899999999766 56778883332 22232 458999999999998763 112 22213 33232
Q ss_pred ccccCCcccChhHHHHHHHHHhcC
Q 045570 408 DYRVGSDLVMAGDIESAVRCLMDG 431 (468)
Q Consensus 408 ~~~~~~~~~~~~~l~~av~~vl~~ 431 (468)
.-+.+++.++|.+++.+
T Consensus 324 -------~~d~~~~~~ai~~~l~~ 340 (373)
T cd04950 324 -------ADDPEEFVAAIEKALLE 340 (373)
T ss_pred -------CCCHHHHHHHHHHHHhc
Confidence 22789999999998763
No 123
>PRK10017 colanic acid biosynthesis protein; Provisional
Probab=95.51 E-value=0.64 Score=46.32 Aligned_cols=182 Identities=14% Similarity=0.220 Sum_probs=100.1
Q ss_pred HHHhhhcCCCCcEEEEeccCcccc------CH----HHHHHHHHHHHhCCCcEEEEEecCCCCCccccccccCCCCCCch
Q 045570 261 IFQWLDDLAESSVVFLCFGSSGSF------DV----AQVKEIAIGLERSGYNFLWSLRVSSPKDEVSAHRYVTNNGVFPE 330 (468)
Q Consensus 261 ~~~~l~~~~~~~vv~vs~GS~~~~------~~----~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~~~~~~~~~~~lp~ 330 (468)
+..|+...+.+++|-|+.-..... .. +.+.++++.|...+.++++..-...... +.+.+...-.
T Consensus 224 ~~~~~~~~~~~~~Vgisvr~~~~~~~~~~~~~~~Y~~~la~~i~~Li~~g~~Vv~lp~~~~~~~------~~~dD~~~~~ 297 (426)
T PRK10017 224 VQHWLDVAAQQKTVAITLRELAPFDKRLGTTQQAYEKAFAGVVNRIIDEGYQVIALSTCTGIDS------YNKDDRMVAL 297 (426)
T ss_pred hhhhhcccccCCEEEEEecccccccccccccHHHHHHHHHHHHHHHHHCCCeEEEEecccCccC------CCCchHHHHH
Confidence 345554333445787876543211 21 2344455656556888776643211000 0000001112
Q ss_pred hHHHHhc--CCeEEE--EeccHH--HhhhccccceeeeccCchhHHHHHhcCCcEEeccCccccchhHHHHHhhhceEEE
Q 045570 331 GFLERIK--GRGMIW--GWVPQV--EILAHKAIGGFVSHCGWNSILESLWYGVPIATWPIYAEQQLNAFRMVKELGLALD 404 (468)
Q Consensus 331 ~~~~~~~--~~~~v~--~~vpq~--~iL~~~~~~~~i~HgG~~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~G~G~~ 404 (468)
.+.+..+ .+..++ ++-|.+ .+++++++ +|.. =+-++.-|+..|||.+.+++ |.-... .+.. +|..-.
T Consensus 298 ~l~~~~~~~~~~~vi~~~~~~~e~~~iIs~~dl--~ig~-RlHa~I~a~~~gvP~i~i~Y--~~K~~~-~~~~-lg~~~~ 370 (426)
T PRK10017 298 NLRQHVSDPARYHVVMDELNDLEMGKILGACEL--TVGT-RLHSAIISMNFGTPAIAINY--EHKSAG-IMQQ-LGLPEM 370 (426)
T ss_pred HHHHhcccccceeEecCCCChHHHHHHHhhCCE--EEEe-cchHHHHHHHcCCCEEEeee--hHHHHH-HHHH-cCCccE
Confidence 2323332 233443 233443 68889987 6654 45578888999999999998 443333 3343 477644
Q ss_pred -eeeccccCCcccChhHHHHHHHHHhcCcHHHHHHHHHHHHHHHHhhhcCCChHHHHHHHHHhh
Q 045570 405 -LRLDYRVGSDLVMAGDIESAVRCLMDGENKIRKKVKEMAEISRKSLMEGGSSFNSIGQFISLN 467 (468)
Q Consensus 405 -~~~~~~~~~~~~~~~~l~~av~~vl~~~~~~~~~a~~l~~~~~~~~~~gg~~~~~~~~~~~~~ 467 (468)
++ .+.++.++|.+.+.+++++.+++++..++--+++++. ..+-+.++++.+
T Consensus 371 ~~~------~~~l~~~~Li~~v~~~~~~r~~~~~~l~~~v~~~r~~------~~~~~~~~~~~~ 422 (426)
T PRK10017 371 AID------IRHLLDGSLQAMVADTLGQLPALNARLAEAVSRERQT------GMQMVQSVLERI 422 (426)
T ss_pred Eec------hhhCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHH------HHHHHHHHHHHh
Confidence 34 2488889999999999995467776665555555542 234455555543
No 124
>TIGR02095 glgA glycogen/starch synthases, ADP-glucose type. This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate.
Probab=95.39 E-value=0.35 Score=49.24 Aligned_cols=133 Identities=12% Similarity=0.033 Sum_probs=74.3
Q ss_pred cEEEEeccCccc-cCHHHHHHHHHHHHhCCCcEEEEEecCCCCCccccccccCCCCCCchhH---HHHhcCCeEEEEecc
Q 045570 272 SVVFLCFGSSGS-FDVAQVKEIAIGLERSGYNFLWSLRVSSPKDEVSAHRYVTNNGVFPEGF---LERIKGRGMIWGWVP 347 (468)
Q Consensus 272 ~vv~vs~GS~~~-~~~~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~~~~~~~~~~~lp~~~---~~~~~~~~~v~~~vp 347 (468)
..+++..|.+.. -..+.+.+.+..+.+.+.++++. |.+. ..+.+.+ .+..+.++.+....+
T Consensus 291 ~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~lvi~-G~g~--------------~~~~~~l~~~~~~~~~~v~~~~~~~ 355 (473)
T TIGR02095 291 VPLFGVISRLTQQKGVDLLLAALPELLELGGQLVVL-GTGD--------------PELEEALRELAERYPGNVRVIIGYD 355 (473)
T ss_pred CCEEEEEecCccccChHHHHHHHHHHHHcCcEEEEE-CCCC--------------HHHHHHHHHHHHHCCCcEEEEEcCC
Confidence 356666677653 23344444444444445666654 3321 0011122 122345566655555
Q ss_pred HH---Hhhhccccceeeec---cCch-hHHHHHhcCCcEEeccCcc--ccchhHHHHHhhhceEEEeeeccccCCcccCh
Q 045570 348 QV---EILAHKAIGGFVSH---CGWN-SILESLWYGVPIATWPIYA--EQQLNAFRMVKELGLALDLRLDYRVGSDLVMA 418 (468)
Q Consensus 348 q~---~iL~~~~~~~~i~H---gG~~-s~~eal~~GvP~v~~P~~~--DQ~~na~~~~~~~G~G~~~~~~~~~~~~~~~~ 418 (468)
.. .++..+++ +|.- -|+| +.+||+++|+|.|+....+ |.-.+...-... +.|+.++ .-++
T Consensus 356 ~~~~~~~~~~aDv--~l~pS~~E~~gl~~lEAma~G~pvI~s~~gg~~e~v~~~~~~~~~-~~G~l~~--------~~d~ 424 (473)
T TIGR02095 356 EALAHLIYAGADF--ILMPSRFEPCGLTQLYAMRYGTVPIVRRTGGLADTVVDGDPEAES-GTGFLFE--------EYDP 424 (473)
T ss_pred HHHHHHHHHhCCE--EEeCCCcCCcHHHHHHHHHCCCCeEEccCCCccceEecCCCCCCC-CceEEeC--------CCCH
Confidence 43 47788888 6643 2444 7889999999999876543 222111000122 5677665 4578
Q ss_pred hHHHHHHHHHhc
Q 045570 419 GDIESAVRCLMD 430 (468)
Q Consensus 419 ~~l~~av~~vl~ 430 (468)
+++.++|.+++.
T Consensus 425 ~~la~~i~~~l~ 436 (473)
T TIGR02095 425 GALLAALSRALR 436 (473)
T ss_pred HHHHHHHHHHHH
Confidence 899999999875
No 125
>cd03791 GT1_Glycogen_synthase_DULL1_like This family is most closely related to the GT1 family of glycosyltransferases. Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms.
Probab=95.30 E-value=0.29 Score=49.81 Aligned_cols=133 Identities=14% Similarity=0.080 Sum_probs=73.1
Q ss_pred cEEEEeccCccc-cCHHHHHHHHHHHHhCCCcEEEEEecCCCCCccccccccCCCCCCchhHH---HHhcCCeEEEEecc
Q 045570 272 SVVFLCFGSSGS-FDVAQVKEIAIGLERSGYNFLWSLRVSSPKDEVSAHRYVTNNGVFPEGFL---ERIKGRGMIWGWVP 347 (468)
Q Consensus 272 ~vv~vs~GS~~~-~~~~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~~~~~~~~~~~lp~~~~---~~~~~~~~v~~~vp 347 (468)
..+++..|.+.. -..+.+.+.+..+.+.+.++++. |.+. ..+.+.+. +...+++.+..-.+
T Consensus 296 ~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~lvi~-G~g~--------------~~~~~~~~~~~~~~~~~v~~~~~~~ 360 (476)
T cd03791 296 APLFGFVGRLTEQKGIDLLLEALPELLELGGQLVIL-GSGD--------------PEYEEALRELAARYPGRVAVLIGYD 360 (476)
T ss_pred CCEEEEEeeccccccHHHHHHHHHHHHHcCcEEEEE-ecCC--------------HHHHHHHHHHHHhCCCcEEEEEeCC
Confidence 356666777652 22344444444444445565554 3321 11111221 12245666553334
Q ss_pred HH---Hhhhccccceeeec---cCc-hhHHHHHhcCCcEEeccCcc--ccchhHHHHHhhhceEEEeeeccccCCcccCh
Q 045570 348 QV---EILAHKAIGGFVSH---CGW-NSILESLWYGVPIATWPIYA--EQQLNAFRMVKELGLALDLRLDYRVGSDLVMA 418 (468)
Q Consensus 348 q~---~iL~~~~~~~~i~H---gG~-~s~~eal~~GvP~v~~P~~~--DQ~~na~~~~~~~G~G~~~~~~~~~~~~~~~~ 418 (468)
+. .++..+++ ++.- -|+ .+.+||+++|+|.|+....+ |.-.+...-.+. |.|..++ .-+.
T Consensus 361 ~~~~~~~~~~aDv--~l~pS~~E~~gl~~lEAma~G~pvI~~~~gg~~e~v~~~~~~~~~-~~G~~~~--------~~~~ 429 (476)
T cd03791 361 EALAHLIYAGADF--FLMPSRFEPCGLTQMYAMRYGTVPIVRATGGLADTVIDYNEDTGE-GTGFVFE--------GYNA 429 (476)
T ss_pred HHHHHHHHHhCCE--EECCCCCCCCcHHHHHHhhCCCCCEECcCCCccceEeCCcCCCCC-CCeEEeC--------CCCH
Confidence 33 36788888 6643 122 37899999999999876543 222111110122 5788776 4478
Q ss_pred hHHHHHHHHHhc
Q 045570 419 GDIESAVRCLMD 430 (468)
Q Consensus 419 ~~l~~av~~vl~ 430 (468)
+++.+++.++++
T Consensus 430 ~~l~~~i~~~l~ 441 (476)
T cd03791 430 DALLAALRRALA 441 (476)
T ss_pred HHHHHHHHHHHH
Confidence 999999999885
No 126
>PRK15490 Vi polysaccharide biosynthesis protein TviE; Provisional
Probab=95.30 E-value=0.76 Score=46.96 Aligned_cols=63 Identities=21% Similarity=0.161 Sum_probs=44.3
Q ss_pred cCCeEEEEeccH-HHhhhccccceeeec---cC-chhHHHHHhcCCcEEeccCccccchhHHHHHhhhceEEEee
Q 045570 337 KGRGMIWGWVPQ-VEILAHKAIGGFVSH---CG-WNSILESLWYGVPIATWPIYAEQQLNAFRMVKELGLALDLR 406 (468)
Q Consensus 337 ~~~~~v~~~vpq-~~iL~~~~~~~~i~H---gG-~~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~G~G~~~~ 406 (468)
.+++.+.+|..+ ..+|..+++ ||.. -| -+++.||+++|+|+|+.... .+...+.+. ..|..++
T Consensus 454 ~d~V~FlG~~~Dv~~~LaaADV--fVlPS~~EGfp~vlLEAMA~GlPVVATdvG----G~~EiV~dG-~nG~LVp 521 (578)
T PRK15490 454 LERILFVGASRDVGYWLQKMNV--FILFSRYEGLPNVLIEAQMVGVPVISTPAG----GSAECFIEG-VSGFILD 521 (578)
T ss_pred CCcEEECCChhhHHHHHHhCCE--EEEcccccCccHHHHHHHHhCCCEEEeCCC----CcHHHcccC-CcEEEEC
Confidence 467888887543 337889998 8753 34 56999999999999987653 344444444 6677766
No 127
>PF06722 DUF1205: Protein of unknown function (DUF1205); InterPro: IPR010610 This entry represents a conserved region of unknown function within bacterial glycosyl transferases. Many proteins containing this domain are members of the glycosyl transferase family 28 IPR004276 from INTERPRO.; PDB: 3OTH_A 3OTG_A 3OTI_A 3D0R_A 3D0Q_B 2P6P_A 3UYK_A 3UYL_B 3TSA_B 2YJN_A.
Probab=94.78 E-value=0.05 Score=41.72 Aligned_cols=53 Identities=13% Similarity=0.167 Sum_probs=43.5
Q ss_pred HhHHHHhhhcCCCCcEEEEeccCcccc---CH--HHHHHHHHHHHhCCCcEEEEEecC
Q 045570 258 YQKIFQWLDDLAESSVVFLCFGSSGSF---DV--AQVKEIAIGLERSGYNFLWSLRVS 310 (468)
Q Consensus 258 ~~~~~~~l~~~~~~~vv~vs~GS~~~~---~~--~~~~~~~~al~~~~~~~iw~~~~~ 310 (468)
...+..||...+.++.|+||+||.... .. ..+..++++++..+..+|..+...
T Consensus 27 ~~~~P~Wl~~~~~RpRVcvT~G~~~~~~~g~~~~~~l~~ll~ala~ldvEvV~a~~~~ 84 (97)
T PF06722_consen 27 PAVVPDWLLEPPGRPRVCVTLGTSVRMFFGPGGVPLLRRLLEALAGLDVEVVVALPAA 84 (97)
T ss_dssp SEEEEGGGSSSTSSEEEEEEETHHHCHHHSCHHHCHHHHHHHHHHTSSSEEEEEETTC
T ss_pred CCCCCcccccCCCCCEEEEEcCCCccccccccchHHHHHHHHHHhhCCcEEEEECCHH
Confidence 345667998888899999999998743 22 468889999999999999999865
No 128
>PF13524 Glyco_trans_1_2: Glycosyl transferases group 1
Probab=94.33 E-value=0.52 Score=35.63 Aligned_cols=82 Identities=12% Similarity=0.166 Sum_probs=51.8
Q ss_pred ccCchhHHHHHhcCCcEEeccCccccchhHHHHHhhhc-eEEEeeeccccCCcccChhHHHHHHHHHhcCcHHHHHHHHH
Q 045570 363 HCGWNSILESLWYGVPIATWPIYAEQQLNAFRMVKELG-LALDLRLDYRVGSDLVMAGDIESAVRCLMDGENKIRKKVKE 441 (468)
Q Consensus 363 HgG~~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~G-~G~~~~~~~~~~~~~~~~~~l~~av~~vl~~~~~~~~~a~~ 441 (468)
+|-..-+.|++++|+|+|+-.. ...... -+. | -++.. . +.+++.++|..+++ |+..+++
T Consensus 9 ~~~~~r~~E~~a~G~~vi~~~~----~~~~~~-~~~-~~~~~~~---------~-~~~el~~~i~~ll~-~~~~~~~--- 68 (92)
T PF13524_consen 9 DGPNMRIFEAMACGTPVISDDS----PGLREI-FED-GEHIITY---------N-DPEELAEKIEYLLE-NPEERRR--- 68 (92)
T ss_pred CCCchHHHHHHHCCCeEEECCh----HHHHHH-cCC-CCeEEEE---------C-CHHHHHHHHHHHHC-CHHHHHH---
Confidence 4445689999999999998755 222222 222 4 23322 2 89999999999999 6654443
Q ss_pred HHHHHHHhhhcCCChHHHHHHHH
Q 045570 442 MAEISRKSLMEGGSSFNSIGQFI 464 (468)
Q Consensus 442 l~~~~~~~~~~gg~~~~~~~~~~ 464 (468)
+++..++.+...-+...-+++|+
T Consensus 69 ia~~a~~~v~~~~t~~~~~~~il 91 (92)
T PF13524_consen 69 IAKNARERVLKRHTWEHRAEQIL 91 (92)
T ss_pred HHHHHHHHHHHhCCHHHHHHHHH
Confidence 33333344444667666776665
No 129
>COG3914 Spy Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones]
Probab=94.30 E-value=0.55 Score=47.20 Aligned_cols=132 Identities=19% Similarity=0.161 Sum_probs=84.1
Q ss_pred CCCcEEEEeccCccccCHHHHHHHHHHHHhCCCcEEEEEecCCCCCccccccccCCCCCCchhHHHH------hcCCeEE
Q 045570 269 AESSVVFLCFGSSGSFDVAQVKEIAIGLERSGYNFLWSLRVSSPKDEVSAHRYVTNNGVFPEGFLER------IKGRGMI 342 (468)
Q Consensus 269 ~~~~vv~vs~GS~~~~~~~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~------~~~~~~v 342 (468)
+++-+||+||+-.....++.+..=++-|...+-.++|..+++.. +.+-..+++. -+.+..+
T Consensus 427 p~~avVf~c~~n~~K~~pev~~~wmqIL~~vP~Svl~L~~~~~~-------------~~~~~~l~~la~~~Gv~~eRL~f 493 (620)
T COG3914 427 PEDAVVFCCFNNYFKITPEVFALWMQILSAVPNSVLLLKAGGDD-------------AEINARLRDLAEREGVDSERLRF 493 (620)
T ss_pred CCCeEEEEecCCcccCCHHHHHHHHHHHHhCCCcEEEEecCCCc-------------HHHHHHHHHHHHHcCCChhheee
Confidence 34569999999999999999888888888889999999877411 1111111111 1235555
Q ss_pred EEeccHH---Hhhhccccceeee---ccCchhHHHHHhcCCcEEeccCccccch--hHHHHHhhhceEEEeeeccccCCc
Q 045570 343 WGWVPQV---EILAHKAIGGFVS---HCGWNSILESLWYGVPIATWPIYAEQQL--NAFRMVKELGLALDLRLDYRVGSD 414 (468)
Q Consensus 343 ~~~vpq~---~iL~~~~~~~~i~---HgG~~s~~eal~~GvP~v~~P~~~DQ~~--na~~~~~~~G~G~~~~~~~~~~~~ 414 (468)
.+-.|.. +=+.-+|+ |+. =||..|..|+|..|||+|.++ ++|+- |+..++...|+--.+-
T Consensus 494 ~p~~~~~~h~a~~~iADl--vLDTyPY~g~TTa~daLwm~vPVlT~~--G~~FasR~~~si~~~agi~e~vA-------- 561 (620)
T COG3914 494 LPPAPNEDHRARYGIADL--VLDTYPYGGHTTASDALWMGVPVLTRV--GEQFASRNGASIATNAGIPELVA-------- 561 (620)
T ss_pred cCCCCCHHHHHhhchhhe--eeecccCCCccchHHHHHhcCceeeec--cHHHHHhhhHHHHHhcCCchhhc--------
Confidence 5655544 34445666 664 589999999999999999985 56653 3334444334433332
Q ss_pred ccChhHHHHHH
Q 045570 415 LVMAGDIESAV 425 (468)
Q Consensus 415 ~~~~~~l~~av 425 (468)
.-.++=|+.||
T Consensus 562 ~s~~dYV~~av 572 (620)
T COG3914 562 DSRADYVEKAV 572 (620)
T ss_pred CCHHHHHHHHH
Confidence 22344466666
No 130
>PF06258 Mito_fiss_Elm1: Mitochondrial fission ELM1; InterPro: IPR009367 This family consists of several hypothetical eukaryotic and prokaryotic proteins. The function of this family is unknown.
Probab=93.21 E-value=4 Score=38.85 Aligned_cols=39 Identities=21% Similarity=0.228 Sum_probs=33.9
Q ss_pred cHHHhhhccccceeeeccCchhHHHHHhcCCcEEeccCcc
Q 045570 347 PQVEILAHKAIGGFVSHCGWNSILESLWYGVPIATWPIYA 386 (468)
Q Consensus 347 pq~~iL~~~~~~~~i~HgG~~s~~eal~~GvP~v~~P~~~ 386 (468)
|+...|+.++. .|||=--.+.+.||+..|+|+.++|.-.
T Consensus 221 Py~~~La~ad~-i~VT~DSvSMvsEA~~tG~pV~v~~l~~ 259 (311)
T PF06258_consen 221 PYLGFLAAADA-IVVTEDSVSMVSEAAATGKPVYVLPLPG 259 (311)
T ss_pred cHHHHHHhCCE-EEEcCccHHHHHHHHHcCCCEEEecCCC
Confidence 78889999886 5667777888999999999999999886
No 131
>PF13579 Glyco_trans_4_4: Glycosyl transferase 4-like domain; PDB: 3C4Q_B 3C4V_A 3C48_B 1Z2T_A.
Probab=92.79 E-value=0.26 Score=41.19 Aligned_cols=95 Identities=15% Similarity=0.228 Sum_probs=42.8
Q ss_pred HHHHHHHHHhCCCCeEEEEEecCCCCChhhhhhhcccCCCCCCeEEEeCCCCCCCCCCCcCCChHHHHHHHHHhhchhHH
Q 045570 20 TLEFAKHLTDRDDRISVTILSMKLAVAPWVDAYTKSLTDSQPRICVIDLPPVDPPLPDVLKKSPEYFISLVVESHLPNVK 99 (468)
Q Consensus 20 ~l~La~~L~~rGH~~~Vt~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (468)
+..|+++|.++||+ |+++++..... .. .....++++..++....... . .....+ ..+.
T Consensus 7 ~~~l~~~L~~~G~~--V~v~~~~~~~~------~~--~~~~~~~~~~~~~~~~~~~~-~---~~~~~~--------~~~~ 64 (160)
T PF13579_consen 7 VRELARALAARGHE--VTVVTPQPDPE------DD--EEEEDGVRVHRLPLPRRPWP-L---RLLRFL--------RRLR 64 (160)
T ss_dssp HHHHHHHHHHTT-E--EEEEEE---GG------G---SEEETTEEEEEE--S-SSSG-G---GHCCHH--------HHHH
T ss_pred HHHHHHHHHHCCCE--EEEEecCCCCc------cc--ccccCCceEEeccCCccchh-h---hhHHHH--------HHHH
Confidence 57899999999999 88888752211 11 01124577776653322110 0 000011 1222
Q ss_pred HHHHhhhccCCCCccEEEEcCCcc-hHHHHHH-HcCCCeEEEe
Q 045570 100 NIVSSRSNSGSLQVTGLVLDFFCV-SMVDIAK-ELSLPSYMFL 140 (468)
Q Consensus 100 ~~l~~~~~~~~~~~D~vv~D~~~~-~~~~~A~-~lgiP~v~~~ 140 (468)
..+.. ...++|+|.+..... ....++. ..++|++...
T Consensus 65 ~~l~~----~~~~~Dvv~~~~~~~~~~~~~~~~~~~~p~v~~~ 103 (160)
T PF13579_consen 65 RLLAA----RRERPDVVHAHSPTAGLVAALARRRRGIPLVVTV 103 (160)
T ss_dssp HHCHH----CT---SEEEEEHHHHHHHHHHHHHHHT--EEEE-
T ss_pred HHHhh----hccCCeEEEecccchhHHHHHHHHccCCcEEEEE
Confidence 33311 235899999766332 3344455 7899987644
No 132
>PRK10125 putative glycosyl transferase; Provisional
Probab=91.56 E-value=4.9 Score=39.92 Aligned_cols=61 Identities=13% Similarity=0.025 Sum_probs=40.8
Q ss_pred HHhhhccccceeeecc----CchhHHHHHhcCCcEEeccCccccchhHHHHHhhhceEEEeeeccccCCcccChhHHHHH
Q 045570 349 VEILAHKAIGGFVSHC----GWNSILESLWYGVPIATWPIYAEQQLNAFRMVKELGLALDLRLDYRVGSDLVMAGDIESA 424 (468)
Q Consensus 349 ~~iL~~~~~~~~i~Hg----G~~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~G~G~~~~~~~~~~~~~~~~~~l~~a 424 (468)
..++..+++ ||.-. --++++||+++|+|+|+-...+ .. .+++. +-|..++ .-+.++|+++
T Consensus 301 ~~~y~~aDv--fV~pS~~Egfp~vilEAmA~G~PVVat~~gG----~~-Eiv~~-~~G~lv~--------~~d~~~La~~ 364 (405)
T PRK10125 301 MSALNQMDA--LVFSSRVDNYPLILCEALSIGVPVIATHSDA----AR-EVLQK-SGGKTVS--------EEEVLQLAQL 364 (405)
T ss_pred HHHHHhCCE--EEECCccccCcCHHHHHHHcCCCEEEeCCCC----hH-HhEeC-CcEEEEC--------CCCHHHHHhc
Confidence 335666887 77533 3468999999999999998765 12 23444 5687776 3366777764
Q ss_pred H
Q 045570 425 V 425 (468)
Q Consensus 425 v 425 (468)
+
T Consensus 365 ~ 365 (405)
T PRK10125 365 S 365 (405)
T ss_pred c
Confidence 3
No 133
>PHA01630 putative group 1 glycosyl transferase
Probab=90.81 E-value=16 Score=35.20 Aligned_cols=107 Identities=15% Similarity=0.071 Sum_probs=58.4
Q ss_pred EeccHHH---hhhccccceeee--c-cC-chhHHHHHhcCCcEEeccCcc--ccchhHH--HHHhh-----------hce
Q 045570 344 GWVPQVE---ILAHKAIGGFVS--H-CG-WNSILESLWYGVPIATWPIYA--EQQLNAF--RMVKE-----------LGL 401 (468)
Q Consensus 344 ~~vpq~~---iL~~~~~~~~i~--H-gG-~~s~~eal~~GvP~v~~P~~~--DQ~~na~--~~~~~-----------~G~ 401 (468)
.++|+.+ ++..+++ ||. + .| -.++.||+++|+|+|+.-..+ |.-.+.. .+++. .++
T Consensus 196 ~~v~~~~l~~~y~~aDv--~v~pS~~E~fgl~~lEAMA~G~PVIas~~gg~~E~i~~~~ng~lv~~~~~~~~~~~~~~~~ 273 (331)
T PHA01630 196 TPLPDDDIYSLFAGCDI--LFYPVRGGAFEIPVIEALALGLDVVVTEKGAWSEWVLSNLDVYWIKSGRKPKLWYTNPIHV 273 (331)
T ss_pred ccCCHHHHHHHHHhCCE--EEECCccccCChHHHHHHHcCCCEEEeCCCCchhhccCCCceEEeeecccccccccCCccc
Confidence 3466555 5788888 653 2 32 458999999999999976543 2211110 00110 023
Q ss_pred EEEeeeccccCCcccChhHHHHHHHHHhcCc--HHHHHHHHHHHHHHHHhhhcCCChHHHHHHHHH
Q 045570 402 ALDLRLDYRVGSDLVMAGDIESAVRCLMDGE--NKIRKKVKEMAEISRKSLMEGGSSFNSIGQFIS 465 (468)
Q Consensus 402 G~~~~~~~~~~~~~~~~~~l~~av~~vl~~~--~~~~~~a~~l~~~~~~~~~~gg~~~~~~~~~~~ 465 (468)
|..+. .+.+++.+++.+++.+. +.++++.+.-+...++ .-|-...++++.+
T Consensus 274 G~~v~---------~~~~~~~~~ii~~l~~~~~~~~~~~~~~~~~~~~~----~fs~~~ia~k~~~ 326 (331)
T PHA01630 274 GYFLD---------PDIEDAYQKLLEALANWTPEKKKENLEGRAILYRE----NYSYNAIAKMWEK 326 (331)
T ss_pred ccccC---------CCHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHH----hCCHHHHHHHHHH
Confidence 43322 25677888888888732 4555554444443333 3454444445544
No 134
>PLN02316 synthase/transferase
Probab=90.40 E-value=14 Score=41.07 Aligned_cols=112 Identities=9% Similarity=-0.017 Sum_probs=65.4
Q ss_pred CCeEEEEeccHH---Hhhhccccceeeecc---C-chhHHHHHhcCCcEEeccCcc--ccchhHH----HHHhh--hceE
Q 045570 338 GRGMIWGWVPQV---EILAHKAIGGFVSHC---G-WNSILESLWYGVPIATWPIYA--EQQLNAF----RMVKE--LGLA 402 (468)
Q Consensus 338 ~~~~v~~~vpq~---~iL~~~~~~~~i~Hg---G-~~s~~eal~~GvP~v~~P~~~--DQ~~na~----~~~~~--~G~G 402 (468)
+++.+....+.. .+++.+|+ |+.-. | -.+.+||+++|+|.|+.-..+ |...... +.... -+-|
T Consensus 900 ~rV~f~g~~de~lah~iyaaADi--flmPS~~EP~GLvqLEAMa~GtppVvs~vGGL~DtV~d~d~~~~~~~~~g~~~tG 977 (1036)
T PLN02316 900 DRARLCLTYDEPLSHLIYAGADF--ILVPSIFEPCGLTQLTAMRYGSIPVVRKTGGLFDTVFDVDHDKERAQAQGLEPNG 977 (1036)
T ss_pred CeEEEEecCCHHHHHHHHHhCcE--EEeCCcccCccHHHHHHHHcCCCeEEEcCCCcHhhccccccccccccccccCCce
Confidence 456665444443 58888898 77432 2 348999999999988865543 2221110 00000 1457
Q ss_pred EEeeeccccCCcccChhHHHHHHHHHhcCcHHHHHHHHHHHHHHHHhhhcCCChHHHHHH
Q 045570 403 LDLRLDYRVGSDLVMAGDIESAVRCLMDGENKIRKKVKEMAEISRKSLMEGGSSFNSIGQ 462 (468)
Q Consensus 403 ~~~~~~~~~~~~~~~~~~l~~av~~vl~~~~~~~~~a~~l~~~~~~~~~~gg~~~~~~~~ 462 (468)
..++ ..+++.|..+|.+++. + |.+....+++..++.+...-|-...+++
T Consensus 978 flf~--------~~d~~aLa~AL~raL~-~--~~~~~~~~~~~~r~~m~~dFSW~~~A~~ 1026 (1036)
T PLN02316 978 FSFD--------GADAAGVDYALNRAIS-A--WYDGRDWFNSLCKRVMEQDWSWNRPALD 1026 (1036)
T ss_pred EEeC--------CCCHHHHHHHHHHHHh-h--hhhhHHHHHHHHHHHHHhhCCHHHHHHH
Confidence 7665 5688999999999987 3 3333444555555555444443333333
No 135
>PLN02939 transferase, transferring glycosyl groups
Probab=90.16 E-value=11 Score=41.34 Aligned_cols=84 Identities=11% Similarity=0.039 Sum_probs=53.9
Q ss_pred cCCeEEEEeccHH---Hhhhccccceeeecc---C-chhHHHHHhcCCcEEeccCcc--ccchh--HHHHHhhhceEEEe
Q 045570 337 KGRGMIWGWVPQV---EILAHKAIGGFVSHC---G-WNSILESLWYGVPIATWPIYA--EQQLN--AFRMVKELGLALDL 405 (468)
Q Consensus 337 ~~~~~v~~~vpq~---~iL~~~~~~~~i~Hg---G-~~s~~eal~~GvP~v~~P~~~--DQ~~n--a~~~~~~~G~G~~~ 405 (468)
.+++.+..+.+.. .+++.+|+ ||.-. | -.+.+||+++|+|.|+....+ |...+ ...+.+.-+-|..+
T Consensus 836 ~drV~FlG~~de~lah~IYAaADI--FLmPSr~EPfGLvqLEAMAyGtPPVVs~vGGL~DtV~d~d~e~i~~eg~NGfLf 913 (977)
T PLN02939 836 NNNIRLILKYDEALSHSIYAASDM--FIIPSMFEPCGLTQMIAMRYGSVPIVRKTGGLNDSVFDFDDETIPVELRNGFTF 913 (977)
T ss_pred CCeEEEEeccCHHHHHHHHHhCCE--EEECCCccCCcHHHHHHHHCCCCEEEecCCCCcceeecCCccccccCCCceEEe
Confidence 3568888877764 48999998 88532 2 247899999999999876654 22211 11111111456655
Q ss_pred eeccccCCcccChhHHHHHHHHHhc
Q 045570 406 RLDYRVGSDLVMAGDIESAVRCLMD 430 (468)
Q Consensus 406 ~~~~~~~~~~~~~~~l~~av~~vl~ 430 (468)
. .-+++.+.+++.+++.
T Consensus 914 ~--------~~D~eaLa~AL~rAL~ 930 (977)
T PLN02939 914 L--------TPDEQGLNSALERAFN 930 (977)
T ss_pred c--------CCCHHHHHHHHHHHHH
Confidence 5 4478888888888764
No 136
>PF13477 Glyco_trans_4_2: Glycosyl transferase 4-like
Probab=89.92 E-value=2 Score=35.13 Aligned_cols=99 Identities=18% Similarity=0.188 Sum_probs=58.1
Q ss_pred EEEEcCCCCCChHHHHHHHHHHHhCCCCeEEEEEecCCCCChhhhhhhcccCCCCCCeEEEeCCCCCCCCCCCcCCChHH
Q 045570 6 LIFVPSPGIGHLVSTLEFAKHLTDRDDRISVTILSMKLAVAPWVDAYTKSLTDSQPRICVIDLPPVDPPLPDVLKKSPEY 85 (468)
Q Consensus 6 i~~~~~p~~GH~~P~l~La~~L~~rGH~~~Vt~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 85 (468)
|++++.-...| ...+++.|.++||+ |++++..... +. .....++.+..++.. . .....
T Consensus 2 Il~i~~~~~~~---~~~~~~~L~~~g~~--V~ii~~~~~~--------~~-~~~~~~i~~~~~~~~----~----k~~~~ 59 (139)
T PF13477_consen 2 ILLIGNTPSTF---IYNLAKELKKRGYD--VHIITPRNDY--------EK-YEIIEGIKVIRLPSP----R----KSPLN 59 (139)
T ss_pred EEEEecCcHHH---HHHHHHHHHHCCCE--EEEEEcCCCc--------hh-hhHhCCeEEEEecCC----C----CccHH
Confidence 77777766666 45789999999988 8888875221 11 111346777766422 0 01111
Q ss_pred HHHHHHHhhchhHHHHHHhhhccCCCCccEEEEcCCcc---hHHHHHHHcC-CCeEE
Q 045570 86 FISLVVESHLPNVKNIVSSRSNSGSLQVTGLVLDFFCV---SMVDIAKELS-LPSYM 138 (468)
Q Consensus 86 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~D~vv~D~~~~---~~~~~A~~lg-iP~v~ 138 (468)
.+ . .. .+...+.+. +||+|.+..... .+..++...+ +|++.
T Consensus 60 ~~----~-~~-~l~k~ik~~------~~DvIh~h~~~~~~~~~~l~~~~~~~~~~i~ 104 (139)
T PF13477_consen 60 YI----K-YF-RLRKIIKKE------KPDVIHCHTPSPYGLFAMLAKKLLKNKKVIY 104 (139)
T ss_pred HH----H-HH-HHHHHhccC------CCCEEEEecCChHHHHHHHHHHHcCCCCEEE
Confidence 11 1 11 344445443 899998777543 2334567788 88774
No 137
>COG4370 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=89.61 E-value=1.8 Score=40.07 Aligned_cols=93 Identities=17% Similarity=0.241 Sum_probs=58.6
Q ss_pred CCeEEE-EeccHHHhhhccccceeeeccCchhHHHHHhcCCcEEeccCccccchhHH--HHHhhhceEEEeeeccccCCc
Q 045570 338 GRGMIW-GWVPQVEILAHKAIGGFVSHCGWNSILESLWYGVPIATWPIYAEQQLNAF--RMVKELGLALDLRLDYRVGSD 414 (468)
Q Consensus 338 ~~~~v~-~~vpq~~iL~~~~~~~~i~HgG~~s~~eal~~GvP~v~~P~~~DQ~~na~--~~~~~~G~G~~~~~~~~~~~~ 414 (468)
+|-.++ .|-...++|.++++ .|--.|- .+-.++=-|+|+|.+|-.+-|+.-.. +=.+.+|+.+.+-.
T Consensus 294 dnc~l~lsqqsfadiLH~ada--algmAGT-AtEQavGLGkPvi~fPg~GPQy~pgFA~rQ~rLLG~sltlv~------- 363 (412)
T COG4370 294 DNCSLWLSQQSFADILHAADA--ALGMAGT-ATEQAVGLGKPVIGFPGQGPQYNPGFAERQQRLLGASLTLVR------- 363 (412)
T ss_pred CceEEEEeHHHHHHHHHHHHH--HHHhccc-hHHHhhccCCceeecCCCCCCcChHHHHHHHHHhcceeeecC-------
Confidence 344443 67777778888877 5544432 23345678999999999999976543 43344577765542
Q ss_pred ccChhHHHHH-HHHHhcCcHHHHHHHHHHH
Q 045570 415 LVMAGDIESA-VRCLMDGENKIRKKVKEMA 443 (468)
Q Consensus 415 ~~~~~~l~~a-v~~vl~~~~~~~~~a~~l~ 443 (468)
.+++..+. .++++. |+.+.++++.-.
T Consensus 364 --~~aq~a~~~~q~ll~-dp~r~~air~nG 390 (412)
T COG4370 364 --PEAQAAAQAVQELLG-DPQRLTAIRHNG 390 (412)
T ss_pred --CchhhHHHHHHHHhc-ChHHHHHHHhcc
Confidence 33344444 444888 787777766433
No 138
>TIGR02400 trehalose_OtsA alpha,alpha-trehalose-phosphate synthase [UDP-forming]. This enzyme catalyzes the key, penultimate step in biosynthesis of trehalose, a compatible solute made as an osmoprotectant in some species in all three domains of life. The gene symbol OtsA stands for osmotically regulated trehalose synthesis A. Trehalose helps protect against both osmotic and thermal stresses, and is made from two glucose subunits. This model excludes glucosylglycerol-phosphate synthase, an enzyme of an analogous osmoprotectant system in many cyanobacterial strains. This model does not identify archaeal examples, as they are more divergent than glucosylglycerol-phosphate synthase. Sequences that score in the gray zone between the trusted and noise cutoffs include a number of yeast multidomain proteins in which the N-terminal domain may be functionally equivalent to this family. The gray zone also includes the OtsA of Cornyebacterium glutamicum (and related species), shown to be responsib
Probab=89.50 E-value=3.3 Score=41.82 Aligned_cols=101 Identities=13% Similarity=0.022 Sum_probs=65.7
Q ss_pred EeccHHH---hhhccccceeee---ccCch-hHHHHHhcCCc----EEeccCccccchhHHHHHhhhceEEEeeeccccC
Q 045570 344 GWVPQVE---ILAHKAIGGFVS---HCGWN-SILESLWYGVP----IATWPIYAEQQLNAFRMVKELGLALDLRLDYRVG 412 (468)
Q Consensus 344 ~~vpq~~---iL~~~~~~~~i~---HgG~~-s~~eal~~GvP----~v~~P~~~DQ~~na~~~~~~~G~G~~~~~~~~~~ 412 (468)
+.+|+.+ ++..+++ |+. +=|+| +..|++++|+| +|+--+.+-. ..+ +-|+.++
T Consensus 342 ~~~~~~el~aly~aaDv--~vv~S~~EG~~Lv~lEamA~g~P~~g~vVlS~~~G~~----~~l----~~gllVn------ 405 (456)
T TIGR02400 342 RSYDREELMALYRAADV--GLVTPLRDGMNLVAKEYVAAQDPKDGVLILSEFAGAA----QEL----NGALLVN------ 405 (456)
T ss_pred CCCCHHHHHHHHHhCcE--EEECccccccCccHHHHHHhcCCCCceEEEeCCCCCh----HHh----CCcEEEC------
Confidence 4556665 4677888 775 34655 77899999999 6665554422 111 3356555
Q ss_pred CcccChhHHHHHHHHHhcCc-HHHHHHHHHHHHHHHHhhhcCCChHHHHHHHHHhh
Q 045570 413 SDLVMAGDIESAVRCLMDGE-NKIRKKVKEMAEISRKSLMEGGSSFNSIGQFISLN 467 (468)
Q Consensus 413 ~~~~~~~~l~~av~~vl~~~-~~~~~~a~~l~~~~~~~~~~gg~~~~~~~~~~~~~ 467 (468)
..+.+++++||.++++.+ ++.+++.+++.+.+.+ -+...=+++++++|
T Consensus 406 --P~d~~~lA~aI~~aL~~~~~er~~r~~~~~~~v~~-----~~~~~W~~~~l~~l 454 (456)
T TIGR02400 406 --PYDIDGMADAIARALTMPLEEREERHRAMMDKLRK-----NDVQRWREDFLSDL 454 (456)
T ss_pred --CCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhh-----CCHHHHHHHHHHHh
Confidence 558899999999999832 3555555555555443 36666677777765
No 139
>cd03789 GT1_LPS_heptosyltransferase Lipopolysaccharide heptosyltransferase is involved in the biosynthesis of lipooligosaccharide (LOS). Lipopolysaccharide (LPS) is a major component of the outer membrane of gram-negative bacteria. LPS heptosyltransferase transfers heptose molecules from ADP-heptose to 3-deoxy-D-manno-octulosonic acid (KDO), a part of the inner core component of LPS. This family belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=89.25 E-value=19 Score=33.58 Aligned_cols=38 Identities=18% Similarity=0.288 Sum_probs=34.8
Q ss_pred EEEEEcCCCCCChHHHHHHHHHHHhCCCCeEEEEEecC
Q 045570 5 ELIFVPSPGIGHLVSTLEFAKHLTDRDDRISVTILSMK 42 (468)
Q Consensus 5 ~i~~~~~p~~GH~~P~l~La~~L~~rGH~~~Vt~~~~~ 42 (468)
||+++-..+.|++.=+.++.++|+++..+.+|++++.+
T Consensus 1 kILii~~~~iGD~i~~~p~l~~Lk~~~P~~~I~~l~~~ 38 (279)
T cd03789 1 RILVIRLSWIGDVVLATPLLRALKARYPDARITVLAPP 38 (279)
T ss_pred CEEEEecccHHHHHHHHHHHHHHHHHCCCCEEEEEECh
Confidence 48999999999999999999999998766779999987
No 140
>COG1817 Uncharacterized protein conserved in archaea [Function unknown]
Probab=88.53 E-value=7.9 Score=36.21 Aligned_cols=112 Identities=12% Similarity=0.076 Sum_probs=68.2
Q ss_pred EEcCCCCCChHHHHHHHHHHHhCCCCeEEEEEecCCCCChhhhhhhcccCCCCCCeEEEeCCCCCCCCCCCcCCChHHHH
Q 045570 8 FVPSPGIGHLVSTLEFAKHLTDRDDRISVTILSMKLAVAPWVDAYTKSLTDSQPRICVIDLPPVDPPLPDVLKKSPEYFI 87 (468)
Q Consensus 8 ~~~~p~~GH~~P~l~La~~L~~rGH~~~Vt~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 87 (468)
.+=..-.-|+.-|-.|.+.|.++||+ |.+.+-+... +.+.++.+ |+.+..+..... ......+
T Consensus 4 wiDI~n~~hvhfFk~lI~elekkG~e--v~iT~rd~~~---v~~LLd~y-----gf~~~~Igk~g~-------~tl~~Kl 66 (346)
T COG1817 4 WIDIGNPPHVHFFKNLIWELEKKGHE--VLITCRDFGV---VTELLDLY-----GFPYKSIGKHGG-------VTLKEKL 66 (346)
T ss_pred EEEcCCcchhhHHHHHHHHHHhCCeE--EEEEEeecCc---HHHHHHHh-----CCCeEeecccCC-------ccHHHHH
Confidence 34455667889999999999999999 5444433221 22344433 566665542110 1122122
Q ss_pred HHHHHhhchhHHHHHHhhhccCCCCccEEEEcCCcchHHHHHHHcCCCeEEEeCchh
Q 045570 88 SLVVESHLPNVKNIVSSRSNSGSLQVTGLVLDFFCVSMVDIAKELSLPSYMFLTSNM 144 (468)
Q Consensus 88 ~~~~~~~~~~~~~~l~~~~~~~~~~~D~vv~D~~~~~~~~~A~~lgiP~v~~~~~~~ 144 (468)
....+... .+.++..+. +||+.+. ..++....+|-.+|+|.+.+.=...
T Consensus 67 ~~~~eR~~-~L~ki~~~~------kpdv~i~-~~s~~l~rvafgLg~psIi~~D~eh 115 (346)
T COG1817 67 LESAERVY-KLSKIIAEF------KPDVAIG-KHSPELPRVAFGLGIPSIIFVDNEH 115 (346)
T ss_pred HHHHHHHH-HHHHHHhhc------CCceEee-cCCcchhhHHhhcCCceEEecCChh
Confidence 22223322 444555554 8999998 6677888999999999998765443
No 141
>cd03788 GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a glycosyltransferase that catalyses the synthesis of alpha,alpha-1,1-trehalose-6-phosphate from glucose-6-phosphate using a UDP-glucose donor. It is a key enzyme in the trehalose synthesis pathway. Trehalose is a nonreducing disaccharide present in a wide variety of organisms and may serve as a source of energy and carbon. It is characterized most notably in insect, plant, and microbial cells. Its production is often associated with a variety of stress conditions, including desiccation, dehydration, heat, cold, and oxidation. This family represents the catalytic domain of the TPS. Some members of this domain family coexist with a C-terminal trehalose phosphatase domain.
Probab=86.76 E-value=2.9 Score=42.34 Aligned_cols=102 Identities=13% Similarity=0.068 Sum_probs=61.6
Q ss_pred EEeccHHH---hhhccccceeee---ccCch-hHHHHHhcCCc----EEeccCccccchhHHHHHhhhceEEEeeecccc
Q 045570 343 WGWVPQVE---ILAHKAIGGFVS---HCGWN-SILESLWYGVP----IATWPIYAEQQLNAFRMVKELGLALDLRLDYRV 411 (468)
Q Consensus 343 ~~~vpq~~---iL~~~~~~~~i~---HgG~~-s~~eal~~GvP----~v~~P~~~DQ~~na~~~~~~~G~G~~~~~~~~~ 411 (468)
.+++++.+ ++..+++ ||. +-|+| +++||+++|+| +|+--+.+- + . .. .-|+.++
T Consensus 346 ~g~v~~~el~~~y~~aDv--~v~pS~~Eg~~lv~lEAma~g~p~~g~vV~S~~~G~----~-~--~~-~~g~lv~----- 410 (460)
T cd03788 346 YRSLPREELAALYRAADV--ALVTPLRDGMNLVAKEYVACQDDDPGVLILSEFAGA----A-E--EL-SGALLVN----- 410 (460)
T ss_pred eCCCCHHHHHHHHHhccE--EEeCccccccCcccceeEEEecCCCceEEEeccccc----h-h--hc-CCCEEEC-----
Confidence 36777766 4777888 663 44655 67899999999 544422221 1 1 01 2355555
Q ss_pred CCcccChhHHHHHHHHHhcCcH-HHHHHHHHHHHHHHHhhhcCCChHHHHHHHHHhh
Q 045570 412 GSDLVMAGDIESAVRCLMDGEN-KIRKKVKEMAEISRKSLMEGGSSFNSIGQFISLN 467 (468)
Q Consensus 412 ~~~~~~~~~l~~av~~vl~~~~-~~~~~a~~l~~~~~~~~~~gg~~~~~~~~~~~~~ 467 (468)
.-+.++++++|.++++.++ +.+++.++..+.+. .-+...-+++++++|
T Consensus 411 ---p~d~~~la~ai~~~l~~~~~e~~~~~~~~~~~v~-----~~~~~~w~~~~l~~l 459 (460)
T cd03788 411 ---PYDIDEVADAIHRALTMPLEERRERHRKLREYVR-----THDVQAWANSFLDDL 459 (460)
T ss_pred ---CCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH-----hCCHHHHHHHHHHhh
Confidence 4578999999999998332 33333333333332 346667777887776
No 142
>TIGR03713 acc_sec_asp1 accessory Sec system protein Asp1. This protein is designated Asp1 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.
Probab=86.39 E-value=3.7 Score=42.14 Aligned_cols=75 Identities=8% Similarity=0.098 Sum_probs=53.1
Q ss_pred CCeEEEEeccH---HHhhhccccceeeecc---CchhHHHHHhcCCcEEeccCccccchhHHHHHhhhceEEEeeecccc
Q 045570 338 GRGMIWGWVPQ---VEILAHKAIGGFVSHC---GWNSILESLWYGVPIATWPIYAEQQLNAFRMVKELGLALDLRLDYRV 411 (468)
Q Consensus 338 ~~~~v~~~vpq---~~iL~~~~~~~~i~Hg---G~~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~G~G~~~~~~~~~ 411 (468)
.++.+.++... ..++.+..+ +|.=+ |.++.+||+.+|+|+| .......|... .=|..+.
T Consensus 409 ~~v~f~gy~~e~dl~~~~~~arl--~id~s~~eg~~~~ieAiS~GiPqI-------nyg~~~~V~d~-~NG~li~----- 473 (519)
T TIGR03713 409 ERIAFTTLTNEEDLISALDKLRL--IIDLSKEPDLYTQISGISAGIPQI-------NKVETDYVEHN-KNGYIID----- 473 (519)
T ss_pred cEEEEEecCCHHHHHHHHhhheE--EEECCCCCChHHHHHHHHcCCCee-------ecCCceeeEcC-CCcEEeC-----
Confidence 46777788773 236777777 88765 7889999999999999 22233343333 4455443
Q ss_pred CCcccChhHHHHHHHHHhcCcH
Q 045570 412 GSDLVMAGDIESAVRCLMDGEN 433 (468)
Q Consensus 412 ~~~~~~~~~l~~av~~vl~~~~ 433 (468)
+.++|.+++..+|. +.
T Consensus 474 -----d~~~l~~al~~~L~-~~ 489 (519)
T TIGR03713 474 -----DISELLKALDYYLD-NL 489 (519)
T ss_pred -----CHHHHHHHHHHHHh-CH
Confidence 67899999999999 55
No 143
>PRK02261 methylaspartate mutase subunit S; Provisional
Probab=85.97 E-value=1.4 Score=36.30 Aligned_cols=40 Identities=23% Similarity=0.172 Sum_probs=36.9
Q ss_pred CCCcEEEEEcCCCCCChHHHHHHHHHHHhCCCCeEEEEEecC
Q 045570 1 MKKAELIFVPSPGIGHLVSTLEFAKHLTDRDDRISVTILSMK 42 (468)
Q Consensus 1 m~k~~i~~~~~p~~GH~~P~l~La~~L~~rGH~~~Vt~~~~~ 42 (468)
||+++|++.+.++-+|-.-..-++..|.++|.+ |+++...
T Consensus 1 ~~~~~vl~~~~~gD~H~lG~~iv~~~lr~~G~e--Vi~LG~~ 40 (137)
T PRK02261 1 MKKKTVVLGVIGADCHAVGNKILDRALTEAGFE--VINLGVM 40 (137)
T ss_pred CCCCEEEEEeCCCChhHHHHHHHHHHHHHCCCE--EEECCCC
Confidence 899999999999999999999999999999955 8888764
No 144
>PF12000 Glyco_trans_4_3: Gkycosyl transferase family 4 group; InterPro: IPR022623 This presumed domain is functionally uncharacterised and found in bacteria. This region is about 170 amino acids in length and is found N-terminal to PF00534 from PFAM. There is a single completely conserved residue G that may be functionally important.
Probab=82.32 E-value=15 Score=31.53 Aligned_cols=43 Identities=5% Similarity=-0.036 Sum_probs=30.3
Q ss_pred hHHHHHHhhhccCCCCccEEEEcCCcchHHHHHHHc-CCCeEEEe
Q 045570 97 NVKNIVSSRSNSGSLQVTGLVLDFFCVSMVDIAKEL-SLPSYMFL 140 (468)
Q Consensus 97 ~~~~~l~~~~~~~~~~~D~vv~D~~~~~~~~~A~~l-giP~v~~~ 140 (468)
.+.+.+.++.++ ...||+|+...-.-.++-+-+.+ ++|.+.++
T Consensus 52 av~~a~~~L~~~-Gf~PDvI~~H~GWGe~Lflkdv~P~a~li~Y~ 95 (171)
T PF12000_consen 52 AVARAARQLRAQ-GFVPDVIIAHPGWGETLFLKDVFPDAPLIGYF 95 (171)
T ss_pred HHHHHHHHHHHc-CCCCCEEEEcCCcchhhhHHHhCCCCcEEEEE
Confidence 344444555443 45899999998766667777888 99988765
No 145
>PF04464 Glyphos_transf: CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase ; InterPro: IPR007554 Wall-associated teichoic acids are a heterogeneous class of phosphate-rich polymers that are covalently linked to the cell wall peptidoglycan of Gram-positive bacteria. They consist of a main chain of phosphodiester-linked polyols and/or sugar moieties attached to peptidoglycan via a linkage unit. CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase is responsible for the polymerisation of the main chain of the teichoic acid by sequential transfer of glycerol-phosphate units from CDP-glycerol to the linkage unit lipid [].; GO: 0047355 CDP-glycerol glycerophosphotransferase activity, 0016020 membrane; PDB: 3L7K_B 3L7L_D 3L7I_A 3L7J_D 3L7M_D.
Probab=82.17 E-value=1.6 Score=42.81 Aligned_cols=116 Identities=15% Similarity=0.182 Sum_probs=68.5
Q ss_pred CCeEEE-EeccHHHhhhccccceeeeccCchhHHHHHhcCCcEEeccCccccchhHHHHHhhhceEEEeeeccccCCccc
Q 045570 338 GRGMIW-GWVPQVEILAHKAIGGFVSHCGWNSILESLWYGVPIATWPIYAEQQLNAFRMVKELGLALDLRLDYRVGSDLV 416 (468)
Q Consensus 338 ~~~~v~-~~vpq~~iL~~~~~~~~i~HgG~~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~G~G~~~~~~~~~~~~~~ 416 (468)
+++..+ +..+-.++|..+++ .||-- ...+.|.+..++|+|....-.|.+... + |.-.... +..-+...-
T Consensus 252 ~~i~~~~~~~~~~~ll~~aDi--LITDy-SSi~fD~~~l~KPiify~~D~~~Y~~~-----r-g~~~~~~-~~~pg~~~~ 321 (369)
T PF04464_consen 252 SNIIFVSDNEDIYDLLAAADI--LITDY-SSIIFDFLLLNKPIIFYQPDLEEYEKE-----R-GFYFDYE-EDLPGPIVY 321 (369)
T ss_dssp TTEEE-TT-S-HHHHHHT-SE--EEESS--THHHHHGGGT--EEEE-TTTTTTTTT-----S-SBSS-TT-TSSSS-EES
T ss_pred CcEEECCCCCCHHHHHHhcCE--EEEec-hhHHHHHHHhCCCEEEEeccHHHHhhc-----c-CCCCchH-hhCCCceeC
Confidence 455554 44567889999999 99998 458899999999999887666655222 2 3332221 000012244
Q ss_pred ChhHHHHHHHHHhcCcHHHHHHHHHHHHHHHHhhhcCCChHHHHHHHH
Q 045570 417 MAGDIESAVRCLMDGENKIRKKVKEMAEISRKSLMEGGSSFNSIGQFI 464 (468)
Q Consensus 417 ~~~~l~~av~~vl~~~~~~~~~a~~l~~~~~~~~~~gg~~~~~~~~~~ 464 (468)
+.++|.++|..+++++..++++-++..+.+-. ..+|.++.+-++.++
T Consensus 322 ~~~eL~~~i~~~~~~~~~~~~~~~~~~~~~~~-~~Dg~s~eri~~~I~ 368 (369)
T PF04464_consen 322 NFEELIEAIENIIENPDEYKEKREKFRDKFFK-YNDGNSSERIVNYIF 368 (369)
T ss_dssp SHHHHHHHHTTHHHHHHHTHHHHHHHHHHHST-T--S-HHHHHHHHHH
T ss_pred CHHHHHHHHHhhhhCCHHHHHHHHHHHHHhCC-CCCchHHHHHHHHHh
Confidence 77999999999987444666666777777755 356777666555543
No 146
>PF07355 GRDB: Glycine/sarcosine/betaine reductase selenoprotein B (GRDB); InterPro: IPR022787 This entry represents selenoprotein B of glycine reductase, sarcosine reductase, betaine reductase, D-proline reductase, and perhaps others. All members are expected to contain an internal UGA codon, encoding selenocysteine, which may be misinterpreted as a stop codon. ; GO: 0030699 glycine reductase activity, 0050485 oxidoreductase activity, acting on X-H and Y-H to form an X-Y bond, with a disulfide as acceptor, 0055114 oxidation-reduction process, 0030700 glycine reductase complex
Probab=81.72 E-value=13 Score=35.44 Aligned_cols=81 Identities=19% Similarity=0.197 Sum_probs=50.1
Q ss_pred CCCCCChHHHHHHHHHHHhCCCCeEEEEEecCCCCChhhhhhhcccCCCCCCeEEEeCCCCCCCCCCCcCCChHHHHHHH
Q 045570 11 SPGIGHLVSTLEFAKHLTDRDDRISVTILSMKLAVAPWVDAYTKSLTDSQPRICVIDLPPVDPPLPDVLKKSPEYFISLV 90 (468)
Q Consensus 11 ~p~~GH~~P~l~La~~L~~rGH~~~Vt~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (468)
..-.|-+-|-+.|.+.|.. +-++.-|+++.. +|. ..-
T Consensus 28 ~~~~g~vGp~~~l~~~l~~-~~eIv~TiiCGD--------nyf----------------------------------~en 64 (349)
T PF07355_consen 28 EVREGPVGPGLMLEKALKD-DAEIVATIICGD--------NYF----------------------------------NEN 64 (349)
T ss_pred ccccCCCChHHHHHHHhcC-CCEEEEEEEECc--------chh----------------------------------hhC
Confidence 3456778889999998876 335556677764 111 111
Q ss_pred HHhhchhHHHHHHhhhccCCCCccEEEEcCCcch----------HHHHHHHcCCCeEEEe
Q 045570 91 VESHLPNVKNIVSSRSNSGSLQVTGLVLDFFCVS----------MVDIAKELSLPSYMFL 140 (468)
Q Consensus 91 ~~~~~~~~~~~l~~~~~~~~~~~D~vv~D~~~~~----------~~~~A~~lgiP~v~~~ 140 (468)
.+.....+.++++++ +||++|+.+.+.. +..+.++++||+++-.
T Consensus 65 ~eea~~~i~~mv~~~------~pD~viaGPaFnagrYG~acg~v~~aV~e~~~IP~vtaM 118 (349)
T PF07355_consen 65 KEEALKKILEMVKKL------KPDVVIAGPAFNAGRYGVACGEVAKAVQEKLGIPVVTAM 118 (349)
T ss_pred HHHHHHHHHHHHHhc------CCCEEEEcCCcCCchHHHHHHHHHHHHHHhhCCCEEEEe
Confidence 122333555667766 9999998874321 1235668999988643
No 147
>PF13439 Glyco_transf_4: Glycosyltransferase Family 4; PDB: 2JJM_E 3MBO_C 2GEJ_A 2GEK_A.
Probab=80.44 E-value=14 Score=30.91 Aligned_cols=28 Identities=29% Similarity=0.268 Sum_probs=22.6
Q ss_pred CCCChHHHHHHHHHHHhCCCCeEEEEEecC
Q 045570 13 GIGHLVSTLEFAKHLTDRDDRISVTILSMK 42 (468)
Q Consensus 13 ~~GH~~P~l~La~~L~~rGH~~~Vt~~~~~ 42 (468)
..|=-.-...|+++|+++||+ |+++++.
T Consensus 11 ~GG~e~~~~~l~~~l~~~G~~--v~v~~~~ 38 (177)
T PF13439_consen 11 IGGAERVVLNLARALAKRGHE--VTVVSPG 38 (177)
T ss_dssp SSHHHHHHHHHHHHHHHTT-E--EEEEESS
T ss_pred CChHHHHHHHHHHHHHHCCCE--EEEEEcC
Confidence 455567789999999999999 9999875
No 148
>PRK14099 glycogen synthase; Provisional
Probab=80.11 E-value=45 Score=34.04 Aligned_cols=38 Identities=18% Similarity=0.200 Sum_probs=29.6
Q ss_pred CCCcEEEEEcC--------CCCCChHHHHHHHHHHHhCCCCeEEEEEecC
Q 045570 1 MKKAELIFVPS--------PGIGHLVSTLEFAKHLTDRDDRISVTILSMK 42 (468)
Q Consensus 1 m~k~~i~~~~~--------p~~GH~~P~l~La~~L~~rGH~~~Vt~~~~~ 42 (468)
|+++||++++. ++.|++ .-.|.++|+++||+ |.++.|.
T Consensus 1 ~~~~~il~v~~E~~p~~k~ggl~dv--~~~lp~~l~~~g~~--v~v~~P~ 46 (485)
T PRK14099 1 MTPLRVLSVASEIFPLIKTGGLADV--AGALPAALKAHGVE--VRTLVPG 46 (485)
T ss_pred CCCcEEEEEEeccccccCCCcHHHH--HHHHHHHHHHCCCc--EEEEeCC
Confidence 88899999874 344444 56788889999999 8888874
No 149
>PF01975 SurE: Survival protein SurE; InterPro: IPR002828 This entry represents a SurE-like structural domain with a 3-layer alpha/bete/alpha topology that bears some topological similarity to the N-terminal domain of the glutaminase/asparaginase family. This domain is found in the stationary phase survival protein SurE, a metal ion-dependent phosphatase found in eubacteria, archaea and eukaryotes. In Escherichia coli, SurE also has activity as a nucleotidase and exopolyphosphatase, and may be involved in the stress response []. E. coli cells with mutations in the surE gene survive poorly in stationary phase []. The structure of SurE homologues have been determined from Thermotoga maritima [] and the archaea Pyrobaculum aerophilum []. The T. maritima SurE homologue has phosphatase activity that is inhibited by vanadate or tungstate, both of which bind adjacent to the divalent metal ion. This domain is found in acid phosphatases (3.1.3.2 from EC), 5'-nucleotidases (3.1.3.5 from EC), 3'-nucleotidases (3.1.3.6 from EC) and exopolyphosphatases (3.6.1.11 from EC).; GO: 0016787 hydrolase activity; PDB: 1L5X_B 2V4O_D 2V4N_A 2WQK_B 2E6G_G 2E69_D 2E6C_C 2E6B_D 2E6E_A 2E6H_A ....
Probab=77.93 E-value=9.1 Score=33.66 Aligned_cols=25 Identities=16% Similarity=0.151 Sum_probs=20.2
Q ss_pred HHHHHHHHHHHhCCCCeEEEEEecCCC
Q 045570 18 VSTLEFAKHLTDRDDRISVTILSMKLA 44 (468)
Q Consensus 18 ~P~l~La~~L~~rGH~~~Vt~~~~~~~ 44 (468)
.=+.+|+++|.+.||+ |++++|...
T Consensus 14 ~Gi~aL~~~L~~~g~~--V~VvAP~~~ 38 (196)
T PF01975_consen 14 PGIRALAKALSALGHD--VVVVAPDSE 38 (196)
T ss_dssp HHHHHHHHHHTTTSSE--EEEEEESSS
T ss_pred HHHHHHHHHHHhcCCe--EEEEeCCCC
Confidence 3467899999888899 999998744
No 150
>COG2109 BtuR ATP:corrinoid adenosyltransferase [Coenzyme metabolism]
Probab=74.99 E-value=56 Score=28.41 Aligned_cols=104 Identities=13% Similarity=0.003 Sum_probs=57.6
Q ss_pred CCcEEEEEcCCCCCChHHHHHHHHHHHhCCCCeEEEE---EecCCCCChhhhhhhcccCCCCCCeEEEeCCCCCCCCCCC
Q 045570 2 KKAELIFVPSPGIGHLVSTLEFAKHLTDRDDRISVTI---LSMKLAVAPWVDAYTKSLTDSQPRICVIDLPPVDPPLPDV 78 (468)
Q Consensus 2 ~k~~i~~~~~p~~GH~~P~l~La~~L~~rGH~~~Vt~---~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 78 (468)
++.-|.+++..+.|-.+..+.+| |++.||..+|-+ +-+. ... .-...++. .+..++|+.++........
T Consensus 27 ~~Gli~V~TG~GKGKTTAAlG~a--lRa~GhG~rv~vvQFiKg~-~~~-GE~~~~~~---~~~~v~~~~~~~g~tw~~~- 98 (198)
T COG2109 27 EKGLIIVFTGNGKGKTTAALGLA--LRALGHGLRVGVVQFIKGG-WKY-GEEAALEK---FGLGVEFHGMGEGFTWETQ- 98 (198)
T ss_pred ccCeEEEEecCCCChhHHHHHHH--HHHhcCCCEEEEEEEeecC-cch-hHHHHHHh---hccceeEEecCCceeCCCc-
Confidence 34458899999999998876666 666676655443 4433 100 01111221 1356888888765433221
Q ss_pred cCCChHHHHHHHHHhhchhHHHHHHhhhccCCCCccEEEEcCCcc
Q 045570 79 LKKSPEYFISLVVESHLPNVKNIVSSRSNSGSLQVTGLVLDFFCV 123 (468)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~D~vv~D~~~~ 123 (468)
+...-. ......++...+.+. +.++|+||.|-+++
T Consensus 99 ---~~~~d~----~aa~~~w~~a~~~l~---~~~ydlviLDEl~~ 133 (198)
T COG2109 99 ---DREADI----AAAKAGWEHAKEALA---DGKYDLVILDELNY 133 (198)
T ss_pred ---CcHHHH----HHHHHHHHHHHHHHh---CCCCCEEEEehhhH
Confidence 222211 223334444444442 35899999999765
No 151
>COG0859 RfaF ADP-heptose:LPS heptosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=73.79 E-value=88 Score=30.10 Aligned_cols=38 Identities=18% Similarity=0.339 Sum_probs=35.5
Q ss_pred EEEEEcCCCCCChHHHHHHHHHHHhCCCCeEEEEEecC
Q 045570 5 ELIFVPSPGIGHLVSTLEFAKHLTDRDDRISVTILSMK 42 (468)
Q Consensus 5 ~i~~~~~p~~GH~~P~l~La~~L~~rGH~~~Vt~~~~~ 42 (468)
+|+++-.-.-||+.=...+-+.|+++.-++++++++++
T Consensus 3 kIliir~~~iGD~vlt~p~~~~lk~~~P~a~i~~~~~~ 40 (334)
T COG0859 3 KILVIRLSKLGDVVLTLPLLRTLKKAYPNAKIDVLVPK 40 (334)
T ss_pred eEEEEeccchhHHHhHHHHHHHHHHHCCCCEEEEEecc
Confidence 59999999999999999999999999988889999986
No 152
>COG0496 SurE Predicted acid phosphatase [General function prediction only]
Probab=72.98 E-value=20 Score=32.64 Aligned_cols=22 Identities=18% Similarity=0.229 Sum_probs=17.5
Q ss_pred HHHHHHHHHhCCCCeEEEEEecCCC
Q 045570 20 TLEFAKHLTDRDDRISVTILSMKLA 44 (468)
Q Consensus 20 ~l~La~~L~~rGH~~~Vt~~~~~~~ 44 (468)
+-+|+++|+ .+++ |++++|..+
T Consensus 16 i~aL~~al~-~~~d--V~VVAP~~~ 37 (252)
T COG0496 16 IRALARALR-EGAD--VTVVAPDRE 37 (252)
T ss_pred HHHHHHHHh-hCCC--EEEEccCCC
Confidence 557888888 8888 999998743
No 153
>PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=72.72 E-value=13 Score=40.46 Aligned_cols=95 Identities=15% Similarity=0.114 Sum_probs=58.3
Q ss_pred Hhhhccccceeeec---cCch-hHHHHHhcCCc---EEeccCccccchhHHHHHhhhc-eEEEeeeccccCCcccChhHH
Q 045570 350 EILAHKAIGGFVSH---CGWN-SILESLWYGVP---IATWPIYAEQQLNAFRMVKELG-LALDLRLDYRVGSDLVMAGDI 421 (468)
Q Consensus 350 ~iL~~~~~~~~i~H---gG~~-s~~eal~~GvP---~v~~P~~~DQ~~na~~~~~~~G-~G~~~~~~~~~~~~~~~~~~l 421 (468)
.++.-+++ ||.- -|+| +.+|++++|+| ++++.-++ ..+.. +| -|+.++ ..+.+++
T Consensus 371 aly~~ADv--fvvtSlrEGmnLv~lEamA~g~p~~gvlVlSe~~---G~~~~----l~~~allVn--------P~D~~~l 433 (797)
T PLN03063 371 ALYAITDV--MLVTSLRDGMNLVSYEFVACQKAKKGVLVLSEFA---GAGQS----LGAGALLVN--------PWNITEV 433 (797)
T ss_pred HHHHhCCE--EEeCccccccCcchhhHheeecCCCCCEEeeCCc---Cchhh----hcCCeEEEC--------CCCHHHH
Confidence 46777888 7744 4877 66799999999 44444322 12211 23 467666 5688999
Q ss_pred HHHHHHHhcCc-HHHHHHHHHHHHHHHHhhhcCCChHHHHHHHHHh
Q 045570 422 ESAVRCLMDGE-NKIRKKVKEMAEISRKSLMEGGSSFNSIGQFISL 466 (468)
Q Consensus 422 ~~av~~vl~~~-~~~~~~a~~l~~~~~~~~~~gg~~~~~~~~~~~~ 466 (468)
++||.++|+-+ ++.+++.+++.+.+++. +...-.++|++.
T Consensus 434 A~AI~~aL~m~~~er~~r~~~~~~~v~~~-----~~~~Wa~~fl~~ 474 (797)
T PLN03063 434 SSAIKEALNMSDEERETRHRHNFQYVKTH-----SAQKWADDFMSE 474 (797)
T ss_pred HHHHHHHHhCCHHHHHHHHHHHHHhhhhC-----CHHHHHHHHHHH
Confidence 99999999832 34455555555544432 444455555554
No 154
>TIGR02195 heptsyl_trn_II lipopolysaccharide heptosyltransferase II. This family consists of examples of ADP-heptose:LPS heptosyltransferase II, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria.
Probab=71.35 E-value=98 Score=29.61 Aligned_cols=38 Identities=13% Similarity=0.299 Sum_probs=33.4
Q ss_pred EEEEEcCCCCCChHHHHHHHHHHHhCCCCeEEEEEecC
Q 045570 5 ELIFVPSPGIGHLVSTLEFAKHLTDRDDRISVTILSMK 42 (468)
Q Consensus 5 ~i~~~~~p~~GH~~P~l~La~~L~~rGH~~~Vt~~~~~ 42 (468)
||+++-...-|++.=..++.+.|++.=.+.+|++++.+
T Consensus 1 rILii~~~~iGD~i~~~p~l~~Lk~~~P~a~I~~l~~~ 38 (334)
T TIGR02195 1 KILVIGPSWVGDMVMAQSLYRLLKKRYPQAVIDVLAPA 38 (334)
T ss_pred CEEEEccchhHHHHHHHHHHHHHHHHCCCCEEEEEech
Confidence 58999999999999999999999997444679999976
No 155
>PF08660 Alg14: Oligosaccharide biosynthesis protein Alg14 like; InterPro: IPR013969 Alg14 is involved dolichol-linked oligosaccharide biosynthesis and anchors the catalytic subunit Alg13 to the ER membrane [].
Probab=70.10 E-value=60 Score=27.77 Aligned_cols=20 Identities=30% Similarity=0.308 Sum_probs=17.4
Q ss_pred EEcCCCCCChHHHHHHHHHH
Q 045570 8 FVPSPGIGHLVSTLEFAKHL 27 (468)
Q Consensus 8 ~~~~p~~GH~~P~l~La~~L 27 (468)
++-.++-||..=|+.|.+.+
T Consensus 2 l~v~gsGGHt~eml~L~~~~ 21 (170)
T PF08660_consen 2 LVVLGSGGHTAEMLRLLKAL 21 (170)
T ss_pred EEEEcCcHHHHHHHHHHHHh
Confidence 44567889999999999999
No 156
>COG0438 RfaG Glycosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=65.74 E-value=1.1e+02 Score=28.22 Aligned_cols=80 Identities=23% Similarity=0.293 Sum_probs=51.1
Q ss_pred CCeEEEEecc---HHHhhhccccceeeec---cCchh-HHHHHhcCCcEEeccCccccchhHHHHHhhhceEEEeeeccc
Q 045570 338 GRGMIWGWVP---QVEILAHKAIGGFVSH---CGWNS-ILESLWYGVPIATWPIYAEQQLNAFRMVKELGLALDLRLDYR 410 (468)
Q Consensus 338 ~~~~v~~~vp---q~~iL~~~~~~~~i~H---gG~~s-~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~G~G~~~~~~~~ 410 (468)
.++.+.++++ ...++..+++ ++.- .|.|. +.|++++|+|+|.-.. ...... ....+.|. +..
T Consensus 257 ~~v~~~g~~~~~~~~~~~~~~~~--~v~ps~~e~~~~~~~Ea~a~g~pvi~~~~----~~~~e~-~~~~~~g~-~~~--- 325 (381)
T COG0438 257 DNVKFLGYVPDEELAELLASADV--FVLPSLSEGFGLVLLEAMAAGTPVIASDV----GGIPEV-VEDGETGL-LVP--- 325 (381)
T ss_pred CcEEEecccCHHHHHHHHHhCCE--EEeccccccchHHHHHHHhcCCcEEECCC----CChHHH-hcCCCceE-ecC---
Confidence 5677778888 3336666776 6655 35544 5999999999976644 322222 23212466 331
Q ss_pred cCCcccChhHHHHHHHHHhcCcH
Q 045570 411 VGSDLVMAGDIESAVRCLMDGEN 433 (468)
Q Consensus 411 ~~~~~~~~~~l~~av~~vl~~~~ 433 (468)
....+++.+++..+++ +.
T Consensus 326 ----~~~~~~~~~~i~~~~~-~~ 343 (381)
T COG0438 326 ----PGDVEELADALEQLLE-DP 343 (381)
T ss_pred ----CCCHHHHHHHHHHHhc-CH
Confidence 2268999999999998 55
No 157
>PRK03359 putative electron transfer flavoprotein FixA; Reviewed
Probab=64.68 E-value=72 Score=29.40 Aligned_cols=30 Identities=7% Similarity=-0.066 Sum_probs=22.9
Q ss_pred CccEEEEcCCc------chHHHHHHHcCCCeEEEeC
Q 045570 112 QVTGLVLDFFC------VSMVDIAKELSLPSYMFLT 141 (468)
Q Consensus 112 ~~D~vv~D~~~------~~~~~~A~~lgiP~v~~~~ 141 (468)
.+|+|++...+ .-+..+|+.||+|++++..
T Consensus 112 ~~DLVl~G~~s~D~~tgqvg~~lAe~Lg~P~vt~v~ 147 (256)
T PRK03359 112 GFDLILCGDGSSDLYAQQVGLLVGEILNIPAINGVS 147 (256)
T ss_pred CCCEEEEcCccccCCCCcHHHHHHHHhCCCceeeEE
Confidence 69999974322 2567899999999988664
No 158
>PRK02797 4-alpha-L-fucosyltransferase; Provisional
Probab=64.11 E-value=28 Score=32.80 Aligned_cols=81 Identities=17% Similarity=0.182 Sum_probs=59.2
Q ss_pred CCeEEE-Eecc---HHHhhhccccceeeec--cCchhHHHHHhcCCcEEeccCccccchhHHHHHhhhceEEEeeecccc
Q 045570 338 GRGMIW-GWVP---QVEILAHKAIGGFVSH--CGWNSILESLWYGVPIATWPIYAEQQLNAFRMVKELGLALDLRLDYRV 411 (468)
Q Consensus 338 ~~~~v~-~~vp---q~~iL~~~~~~~~i~H--gG~~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~G~G~~~~~~~~~ 411 (468)
+++.+. +++| +..+|..++++-|+|+ =|.|++.-.++.|+|+++- -+-+.|... .+. |+-+-.+
T Consensus 206 ~~~~~L~e~l~f~eYl~lL~~~Dl~~f~~~RQQgiGnl~lLi~~G~~v~l~---r~n~fwqdl-~e~-gv~Vlf~----- 275 (322)
T PRK02797 206 ENFQILTEKLPFDDYLALLRQCDLGYFIFARQQGIGTLCLLIQLGKPVVLS---RDNPFWQDL-TEQ-GLPVLFT----- 275 (322)
T ss_pred ccEEehhhhCCHHHHHHHHHhCCEEEEeechhhHHhHHHHHHHCCCcEEEe---cCCchHHHH-HhC-CCeEEec-----
Confidence 455554 5555 7789999999888886 4899999999999999986 456667654 554 7666445
Q ss_pred CCcccChhHHHHHHHHHh
Q 045570 412 GSDLVMAGDIESAVRCLM 429 (468)
Q Consensus 412 ~~~~~~~~~l~~av~~vl 429 (468)
.+.++...+.++=+++.
T Consensus 276 -~d~L~~~~v~e~~rql~ 292 (322)
T PRK02797 276 -GDDLDEDIVREAQRQLA 292 (322)
T ss_pred -CCcccHHHHHHHHHHHH
Confidence 34788888877755543
No 159
>PRK13932 stationary phase survival protein SurE; Provisional
Probab=63.91 E-value=71 Score=29.42 Aligned_cols=38 Identities=18% Similarity=0.225 Sum_probs=23.9
Q ss_pred CcEEEEEcCCCCCChHHHHHHHHHHHhCCCCeEEEEEecCCC
Q 045570 3 KAELIFVPSPGIGHLVSTLEFAKHLTDRDDRISVTILSMKLA 44 (468)
Q Consensus 3 k~~i~~~~~p~~GH~~P~l~La~~L~~rGH~~~Vt~~~~~~~ 44 (468)
|+||++.-==+. |--=+.+|+++|.+.| + |++++|...
T Consensus 5 ~M~ILltNDDGi-~a~Gi~aL~~~l~~~g-~--V~VvAP~~~ 42 (257)
T PRK13932 5 KPHILVCNDDGI-EGEGIHVLAASMKKIG-R--VTVVAPAEP 42 (257)
T ss_pred CCEEEEECCCCC-CCHHHHHHHHHHHhCC-C--EEEEcCCCC
Confidence 456665432221 2234678889998887 7 888888643
No 160
>TIGR00087 surE 5'/3'-nucleotidase SurE. E. coli SurE is Recommended cutoffs are 15 for homology, 40 for probable orthology, and 200 for orthology with full-length homology.
Probab=63.64 E-value=95 Score=28.39 Aligned_cols=22 Identities=14% Similarity=0.146 Sum_probs=17.7
Q ss_pred HHHHHHHHHhCCCCeEEEEEecCCC
Q 045570 20 TLEFAKHLTDRDDRISVTILSMKLA 44 (468)
Q Consensus 20 ~l~La~~L~~rGH~~~Vt~~~~~~~ 44 (468)
+.+|+++|.+.| + |+++.|...
T Consensus 16 i~aL~~~l~~~g-~--V~VvAP~~~ 37 (244)
T TIGR00087 16 IRALYQALKELG-E--VTVVAPARQ 37 (244)
T ss_pred HHHHHHHHHhCC-C--EEEEeCCCC
Confidence 567899999888 7 999998643
No 161
>PF10083 DUF2321: Uncharacterized protein conserved in bacteria (DUF2321); InterPro: IPR016891 This entry is represented by Bacteriophage 'Lactobacillus prophage Lj928', Orf-Ljo1454. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches. There is currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=63.28 E-value=13 Score=30.84 Aligned_cols=69 Identities=14% Similarity=0.168 Sum_probs=49.6
Q ss_pred ccCccccchhHHHHHhhhceEEEeeeccccCCcccChhHHHHHHHHHhcCcHHHHHHHHHHHHHHHHhhhcCCChHHHHH
Q 045570 382 WPIYAEQQLNAFRMVKELGLALDLRLDYRVGSDLVMAGDIESAVRCLMDGENKIRKKVKEMAEISRKSLMEGGSSFNSIG 461 (468)
Q Consensus 382 ~P~~~DQ~~na~~~~~~~G~G~~~~~~~~~~~~~~~~~~l~~av~~vl~~~~~~~~~a~~l~~~~~~~~~~gg~~~~~~~ 461 (468)
.|-...+-.+|+.+++. .-++ . .-..+.+.+.+.+++.+.|+-+-.+.+++..+.++ |-.....+.
T Consensus 78 yPWt~~~L~aa~el~ee-~eeL--s--------~deke~~~~sl~dL~~d~PkT~vA~~rfKk~~~K~---g~~v~~~~~ 143 (158)
T PF10083_consen 78 YPWTENALEAANELIEE-DEEL--S--------PDEKEQFKESLPDLTKDTPKTKVAATRFKKILSKA---GSIVGDAIR 143 (158)
T ss_pred CchHHHHHHHHHHHHHH-hhcC--C--------HHHHHHHHhhhHHHhhcCCccHHHHHHHHHHHHHH---hHHHHHHHH
Confidence 67777788888887775 2222 2 33567899999999986688888899999999988 544444555
Q ss_pred HHH
Q 045570 462 QFI 464 (468)
Q Consensus 462 ~~~ 464 (468)
.++
T Consensus 144 dIl 146 (158)
T PF10083_consen 144 DIL 146 (158)
T ss_pred HHH
Confidence 444
No 162
>PRK13935 stationary phase survival protein SurE; Provisional
Probab=62.85 E-value=90 Score=28.68 Aligned_cols=22 Identities=14% Similarity=0.238 Sum_probs=16.4
Q ss_pred HHHHHHHHHhCCCCeEEEEEecCCC
Q 045570 20 TLEFAKHLTDRDDRISVTILSMKLA 44 (468)
Q Consensus 20 ~l~La~~L~~rGH~~~Vt~~~~~~~ 44 (468)
+.+|+++|++ +|+ |++++|...
T Consensus 16 i~aL~~~l~~-~~~--V~VvAP~~~ 37 (253)
T PRK13935 16 IIILAEYLSE-KHE--VFVVAPDKE 37 (253)
T ss_pred HHHHHHHHHh-CCc--EEEEccCCC
Confidence 5678888865 578 999998643
No 163
>PRK05986 cob(I)alamin adenolsyltransferase/cobinamide ATP-dependent adenolsyltransferase; Validated
Probab=62.75 E-value=1.1e+02 Score=26.85 Aligned_cols=106 Identities=11% Similarity=-0.018 Sum_probs=58.9
Q ss_pred CCCcEEEEEcCCCCCChHHHHHHHHHHHhCCCCeE-EEEEecCCCCChhhhhhhcccCCCCCCeEEEeCCCCCCCCCCCc
Q 045570 1 MKKAELIFVPSPGIGHLVSTLEFAKHLTDRDDRIS-VTILSMKLAVAPWVDAYTKSLTDSQPRICVIDLPPVDPPLPDVL 79 (468)
Q Consensus 1 m~k~~i~~~~~p~~GH~~P~l~La~~L~~rGH~~~-Vt~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 79 (468)
|++-.|.+++..+.|-.+..+.+|.+.+.+|+.+. |.|+-+. . .......++. .+++++.....+..-..
T Consensus 20 ~~~g~v~v~~g~GkGKtt~a~g~a~ra~g~G~~V~ivQFlKg~-~-~~GE~~~l~~----l~~v~~~~~g~~~~~~~--- 90 (191)
T PRK05986 20 EEKGLLIVHTGNGKGKSTAAFGMALRAVGHGKKVGVVQFIKGA-W-STGERNLLEF----GGGVEFHVMGTGFTWET--- 90 (191)
T ss_pred ccCCeEEEECCCCCChHHHHHHHHHHHHHCCCeEEEEEEecCC-C-ccCHHHHHhc----CCCcEEEECCCCCcccC---
Confidence 34568999999999999999999988888887733 2334432 1 1111122222 13677776654321111
Q ss_pred CCChHHHHHHHHHhhchhHHHHHHhhhccCCCCccEEEEcCCcc
Q 045570 80 KKSPEYFISLVVESHLPNVKNIVSSRSNSGSLQVTGLVLDFFCV 123 (468)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~D~vv~D~~~~ 123 (468)
.+..... ......+..+.+.+. +.++|+||-|-...
T Consensus 91 -~~~~e~~----~~~~~~~~~a~~~l~---~~~ydlvVLDEi~~ 126 (191)
T PRK05986 91 -QDRERDI----AAAREGWEEAKRMLA---DESYDLVVLDELTY 126 (191)
T ss_pred -CCcHHHH----HHHHHHHHHHHHHHh---CCCCCEEEEehhhH
Confidence 1211111 112223333333332 35899999999654
No 164
>PRK13933 stationary phase survival protein SurE; Provisional
Probab=61.68 E-value=1.1e+02 Score=28.12 Aligned_cols=22 Identities=18% Similarity=0.143 Sum_probs=17.0
Q ss_pred HHHHHHHHHhCCCCeEEEEEecCCC
Q 045570 20 TLEFAKHLTDRDDRISVTILSMKLA 44 (468)
Q Consensus 20 ~l~La~~L~~rGH~~~Vt~~~~~~~ 44 (468)
+.+|+++|++ +|+ |++++|...
T Consensus 16 l~aL~~~l~~-~~~--V~VvAP~~~ 37 (253)
T PRK13933 16 INTLAELLSK-YHE--VIIVAPENQ 37 (253)
T ss_pred HHHHHHHHHh-CCc--EEEEccCCC
Confidence 6788888875 678 999988643
No 165
>COG2086 FixA Electron transfer flavoprotein, beta subunit [Energy production and conversion]
Probab=61.44 E-value=79 Score=29.18 Aligned_cols=98 Identities=14% Similarity=0.033 Sum_probs=50.8
Q ss_pred HHHHHHHHhCCCCeEEEEEecCCCCChhhhhhhcccCCCCCCeEEEeCCCCCCCCCCCcCCChHHHHHHHHHhhchhHHH
Q 045570 21 LEFAKHLTDRDDRISVTILSMKLAVAPWVDAYTKSLTDSQPRICVIDLPPVDPPLPDVLKKSPEYFISLVVESHLPNVKN 100 (468)
Q Consensus 21 l~La~~L~~rGH~~~Vt~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (468)
+..|-+|+++||.-+|++++-.+..... .+....+++.+=.++ +.+....+ .++. .....+.+
T Consensus 43 vEeAlrLke~~~~~eV~vlt~Gp~~a~~---~lr~aLAmGaDrail-i~d~~~~~-----~d~~--------~ta~~Laa 105 (260)
T COG2086 43 VEEALRLKEKGYGGEVTVLTMGPPQAEE---ALREALAMGADRAIL-ITDRAFAG-----ADPL--------ATAKALAA 105 (260)
T ss_pred HHHHHHhhccCCCceEEEEEecchhhHH---HHHHHHhcCCCeEEE-EecccccC-----ccHH--------HHHHHHHH
Confidence 5667788887777778888865443321 122112222211111 11110111 1111 11224445
Q ss_pred HHHhhhccCCCCccEEEE-----cCC-cchHHHHHHHcCCCeEEEeC
Q 045570 101 IVSSRSNSGSLQVTGLVL-----DFF-CVSMVDIAKELSLPSYMFLT 141 (468)
Q Consensus 101 ~l~~~~~~~~~~~D~vv~-----D~~-~~~~~~~A~~lgiP~v~~~~ 141 (468)
.+++. ++|+|++ |.- ..-+..+|+.||+|++.+..
T Consensus 106 ~~~~~------~~~LVl~G~qa~D~~t~qvg~~lAe~Lg~P~~t~v~ 146 (260)
T COG2086 106 AVKKI------GPDLVLTGKQAIDGDTGQVGPLLAELLGWPQVTYVS 146 (260)
T ss_pred HHHhc------CCCEEEEecccccCCccchHHHHHHHhCCceeeeEE
Confidence 55554 8888885 332 33568899999999887553
No 166
>TIGR02919 accessory Sec system glycosyltransferase GtfB. Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus.
Probab=61.38 E-value=25 Score=35.26 Aligned_cols=88 Identities=11% Similarity=0.109 Sum_probs=59.2
Q ss_pred CCeEEE-Eecc--HHHhhhccccceeeeccC--chhHHHHHhcCCcEEeccCccccchhHHHHHhhhceEEEeeeccccC
Q 045570 338 GRGMIW-GWVP--QVEILAHKAIGGFVSHCG--WNSILESLWYGVPIATWPIYAEQQLNAFRMVKELGLALDLRLDYRVG 412 (468)
Q Consensus 338 ~~~~v~-~~vp--q~~iL~~~~~~~~i~HgG--~~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~G~G~~~~~~~~~~ 412 (468)
.|+.+. ++.+ -..++..|++=+-|+||. ..++.||+.+|+|++..=...... .. ... |-.+.
T Consensus 328 ~nvvly~~~~~~~l~~ly~~~dlyLdin~~e~~~~al~eA~~~G~pI~afd~t~~~~---~~-i~~---g~l~~------ 394 (438)
T TIGR02919 328 DNVKLYPNITTQKIQELYQTCDIYLDINHGNEILNAVRRAFEYNLLILGFEETAHNR---DF-IAS---ENIFE------ 394 (438)
T ss_pred CCcEEECCcChHHHHHHHHhccEEEEccccccHHHHHHHHHHcCCcEEEEecccCCc---cc-ccC---Cceec------
Confidence 455554 6677 334999999977888876 679999999999999874332111 11 111 33333
Q ss_pred CcccChhHHHHHHHHHhcCcH-HHHHHHHH
Q 045570 413 SDLVMAGDIESAVRCLMDGEN-KIRKKVKE 441 (468)
Q Consensus 413 ~~~~~~~~l~~av~~vl~~~~-~~~~~a~~ 441 (468)
.-+.+++.++|+++|+ ++ .++++..+
T Consensus 395 --~~~~~~m~~~i~~lL~-d~~~~~~~~~~ 421 (438)
T TIGR02919 395 --HNEVDQLISKLKDLLN-DPNQFRELLEQ 421 (438)
T ss_pred --CCCHHHHHHHHHHHhc-CHHHHHHHHHH
Confidence 3467999999999999 55 55555443
No 167
>PRK12342 hypothetical protein; Provisional
Probab=61.29 E-value=81 Score=29.03 Aligned_cols=30 Identities=13% Similarity=0.002 Sum_probs=22.9
Q ss_pred CccEEEEcCCc------chHHHHHHHcCCCeEEEeC
Q 045570 112 QVTGLVLDFFC------VSMVDIAKELSLPSYMFLT 141 (468)
Q Consensus 112 ~~D~vv~D~~~------~~~~~~A~~lgiP~v~~~~ 141 (468)
++|+|++...+ ..+..+|+.||+|++++..
T Consensus 109 ~~DLVl~G~~s~D~~tgqvg~~lA~~Lg~P~vt~v~ 144 (254)
T PRK12342 109 GFDLLLFGEGSGDLYAQQVGLLLGELLQLPVINAVS 144 (254)
T ss_pred CCCEEEEcCCcccCCCCCHHHHHHHHhCCCcEeeEE
Confidence 69999974432 2468899999999988664
No 168
>cd03793 GT1_Glycogen_synthase_GSY2_like Glycogen synthase, which is most closely related to the GT1 family of glycosyltransferases, catalyzes the transfer of a glucose molecule from UDP-glucose to a terminal branch of a glycogen molecule, a rate-limit step of glycogen biosynthesis. GSY2, the member of this family in S. cerevisiae, has been shown to possess glycogen synthase activity.
Probab=59.84 E-value=54 Score=34.03 Aligned_cols=80 Identities=10% Similarity=-0.031 Sum_probs=47.0
Q ss_pred cHHHhhhccccceeee---ccCch-hHHHHHhcCCcEEeccCccccchhHHHHHhhh-ceEEEeeeccccCCcccChhHH
Q 045570 347 PQVEILAHKAIGGFVS---HCGWN-SILESLWYGVPIATWPIYAEQQLNAFRMVKEL-GLALDLRLDYRVGSDLVMAGDI 421 (468)
Q Consensus 347 pq~~iL~~~~~~~~i~---HgG~~-s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~-G~G~~~~~~~~~~~~~~~~~~l 421 (468)
++.+++.-+++ ||. +=|+| +++||+++|+|+|+-...+=- .+...+...- ..|+.+..+. ...-.-+.++|
T Consensus 467 ~y~E~~~g~dl--~v~PS~yE~fG~~~lEAma~G~PvI~t~~~gf~-~~v~E~v~~~~~~gi~V~~r~-~~~~~e~v~~L 542 (590)
T cd03793 467 DYEEFVRGCHL--GVFPSYYEPWGYTPAECTVMGIPSITTNLSGFG-CFMEEHIEDPESYGIYIVDRR-FKSPDESVQQL 542 (590)
T ss_pred chHHHhhhceE--EEeccccCCCCcHHHHHHHcCCCEEEccCcchh-hhhHHHhccCCCceEEEecCC-ccchHHHHHHH
Confidence 47778888888 554 44554 899999999999997663210 1112222210 1466654210 00112345778
Q ss_pred HHHHHHHhc
Q 045570 422 ESAVRCLMD 430 (468)
Q Consensus 422 ~~av~~vl~ 430 (468)
.+++.++++
T Consensus 543 a~~m~~~~~ 551 (590)
T cd03793 543 TQYMYEFCQ 551 (590)
T ss_pred HHHHHHHhC
Confidence 888888876
No 169
>PF02572 CobA_CobO_BtuR: ATP:corrinoid adenosyltransferase BtuR/CobO/CobP; InterPro: IPR003724 ATP:cob(I)alamin (or ATP:corrinoid) adenosyltransferases (2.5.1.17 from EC), catalyse the conversion of cobalamin (vitamin B12) into its coenzyme form, adenosylcobalamin (coenzyme B12) []. Adenosylcobalamin (AdoCbl) is required for the ativity of certain enzymes. AdoCbl contains an adenosyl moiety liganded to the cobalt ion of cobalamin via a covalent Co-C bond, and its synthesis is unique to certain prokaryotes. ATP:cob(I)alamin adenosyltransferases are classed into three groups: CobA-type [], EutT-type [] and PduO-type []. Each of the three enzyme types appears to be specialised for particular AdoCbl-dependent enzymes or for the de novo synthesis AdoCbl. PduO and EutT are distantly related, sharing short conserved motifs, while CobA is evolutionarily unrelated and is an example of convergent evolution. This entry represents the ATP:cob(I)alamin adenosyltransferases CobA (Salmonella typhimurium), CobO (Pseudomonas denitrificans), and ButR (Escherichia coli). There is a high degree of sequence identity between these proteins []. CobA is responsible for attaching the adenosyl moiety from ATP to the cobalt ion of the corrin ring, necessary for the convertion of cobalamin to adenosylcobalamin [, ]. ; GO: 0005524 ATP binding, 0008817 cob(I)yrinic acid a,c-diamide adenosyltransferase activity, 0009236 cobalamin biosynthetic process; PDB: 1G64_A 1G5T_A 1G5R_A.
Probab=59.54 E-value=76 Score=27.22 Aligned_cols=104 Identities=14% Similarity=0.022 Sum_probs=44.9
Q ss_pred CcEEEEEcCCCCCChHHHHHHHHHHHhCCCCeEEEEEecCCC-CChhhhhhhcccCCCCCCeEEEeCCCCCCCCCCCcCC
Q 045570 3 KAELIFVPSPGIGHLVSTLEFAKHLTDRDDRISVTILSMKLA-VAPWVDAYTKSLTDSQPRICVIDLPPVDPPLPDVLKK 81 (468)
Q Consensus 3 k~~i~~~~~p~~GH~~P~l~La~~L~~rGH~~~Vt~~~~~~~-~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 81 (468)
+-.|-+++..+.|-.+..+.+| |++.||+.+|.++-.--. ....-...++.+ +++++........... .
T Consensus 3 ~G~i~vytG~GKGKTTAAlGla--lRA~G~G~rV~ivQFlKg~~~~GE~~~l~~l----~~~~~~~~g~~f~~~~----~ 72 (172)
T PF02572_consen 3 RGLIQVYTGDGKGKTTAALGLA--LRAAGHGMRVLIVQFLKGGRYSGELKALKKL----PNVEIERFGKGFVWRM----N 72 (172)
T ss_dssp ---EEEEESSSS-HHHHHHHHH--HHHHCTT--EEEEESS--SS--HHHHHHGGG----T--EEEE--TT----G----G
T ss_pred CcEEEEEeCCCCCchHHHHHHH--HHHHhCCCEEEEEEEecCCCCcCHHHHHHhC----CeEEEEEcCCcccccC----C
Confidence 3458899999999999666655 667677766666542111 111111222222 3466666554322111 0
Q ss_pred ChHHHHHHHHHhhchhHHHHHHhhhccCCCCccEEEEcCCcc
Q 045570 82 SPEYFISLVVESHLPNVKNIVSSRSNSGSLQVTGLVLDFFCV 123 (468)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~D~vv~D~~~~ 123 (468)
+...- .......++...+.+. +..+|+||.|-...
T Consensus 73 ~~~~~----~~~~~~~~~~a~~~i~---~~~~dlvILDEi~~ 107 (172)
T PF02572_consen 73 EEEED----RAAAREGLEEAKEAIS---SGEYDLVILDEINY 107 (172)
T ss_dssp GHHHH----HHHHHHHHHHHHHHTT----TT-SEEEEETHHH
T ss_pred CcHHH----HHHHHHHHHHHHHHHh---CCCCCEEEEcchHH
Confidence 11111 2223334434433332 35899999998543
No 170
>cd02067 B12-binding B12 binding domain (B12-BD). This domain binds different cobalamid derivates, like B12 (adenosylcobamide) or methylcobalamin or methyl-Co(III) 5-hydroxybenzimidazolylcobamide, it is found in several enzymes, such as glutamate mutase, methionine synthase and methylmalonyl-CoA mutase. Cobalamin undergoes a conformational change on binding the protein; the dimethylbenzimidazole group, which is coordinated to the cobalt in the free cofactor, moves away from the corrin and is replaced by a histidine contributed by the protein. The sequence Asp-X-His-X-X-Gly, which contains this histidine ligand, is conserved in many cobalamin-binding proteins.
Probab=59.04 E-value=13 Score=29.58 Aligned_cols=36 Identities=22% Similarity=0.259 Sum_probs=31.8
Q ss_pred EEEEEcCCCCCChHHHHHHHHHHHhCCCCeEEEEEecC
Q 045570 5 ELIFVPSPGIGHLVSTLEFAKHLTDRDDRISVTILSMK 42 (468)
Q Consensus 5 ~i~~~~~p~~GH~~P~l~La~~L~~rGH~~~Vt~~~~~ 42 (468)
||++.+.|+..|.....-++..|.++|++ |..+...
T Consensus 1 ~vl~~~~~~e~H~lG~~~~~~~l~~~G~~--V~~lg~~ 36 (119)
T cd02067 1 KVVIATVGGDGHDIGKNIVARALRDAGFE--VIDLGVD 36 (119)
T ss_pred CEEEEeeCCchhhHHHHHHHHHHHHCCCE--EEECCCC
Confidence 48999999999999999999999999977 8776643
No 171
>PF05159 Capsule_synth: Capsule polysaccharide biosynthesis protein; InterPro: IPR007833 This family includes export proteins involved in capsule polysaccharide biosynthesis, such as KpsS P42218 from SWISSPROT and LipB P57038 from SWISSPROT. Capsule polysaccharide modification protein lipB/A is involved in the phospholipid modification of the capsular polysaccharide and is a strong requirement for its translocation to the cell surface. The capsule of Neisseria meningitidis serogroup B and of other meningococcal serogroups and other Gram-negative bacterial pathogens, are anchored in the outer membrane through a 1,2-diacylglycerol moiety. The lipA and lipB genes are located on the 3' end of the ctr operon. lipA and lipB do not encode proteins responsible for diacylglycerophosphatidic acid substitution of the meningococcal capsule polymer, but they are required for proper translocation and surface expression of the lipidated polymer []. KpsS is an unusual sulphate-modified form of the capsular polysaccharide in Rhizobium loti (Mesorhizobium loti). Many plants, including R. loti, enter into symbiotic relationships with bacteria that allow survival in nutrient-limiting environments. KpsS functions as a fucosyl sulphotransferase in vitro. The kpsS gene product shares no significant amino acid similarity with previously identified sulphotransferases []. Sulphated cell surface polysaccharides are required for optimum nodule formation but limit growth rate and nodule colonisation in M. loti [].; GO: 0000271 polysaccharide biosynthetic process, 0015774 polysaccharide transport
Probab=58.77 E-value=72 Score=29.49 Aligned_cols=42 Identities=24% Similarity=0.192 Sum_probs=33.1
Q ss_pred eEEEEeccHHHhhhccccceeeeccCchhHHHHHhcCCcEEeccC
Q 045570 340 GMIWGWVPQVEILAHKAIGGFVSHCGWNSILESLWYGVPIATWPI 384 (468)
Q Consensus 340 ~~v~~~vpq~~iL~~~~~~~~i~HgG~~s~~eal~~GvP~v~~P~ 384 (468)
+.+.+-++-.+++.+++. +||-.+ ..-.||+.+|+|++++..
T Consensus 185 ~~~~~~~~~~~Ll~~s~~--VvtinS-tvGlEAll~gkpVi~~G~ 226 (269)
T PF05159_consen 185 VIIDDDVNLYELLEQSDA--VVTINS-TVGLEALLHGKPVIVFGR 226 (269)
T ss_pred EEECCCCCHHHHHHhCCE--EEEECC-HHHHHHHHcCCceEEecC
Confidence 344466788899999998 777754 477899999999999753
No 172
>TIGR02193 heptsyl_trn_I lipopolysaccharide heptosyltransferase I. This family consists of examples of ADP-heptose:LPS heptosyltransferase I, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria.
Probab=57.89 E-value=36 Score=32.40 Aligned_cols=135 Identities=15% Similarity=0.075 Sum_probs=74.0
Q ss_pred CcEEEEecc-Ccc--ccCHHHHHHHHHHHHhCCCcEEEEEecCCCCCccccccccCCCCCCchhHHHHhcCCeEEEE--e
Q 045570 271 SSVVFLCFG-SSG--SFDVAQVKEIAIGLERSGYNFLWSLRVSSPKDEVSAHRYVTNNGVFPEGFLERIKGRGMIWG--W 345 (468)
Q Consensus 271 ~~vv~vs~G-S~~--~~~~~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~v~~--~ 345 (468)
++.|.+.-| |.. ..+.+.+.++++.|.+.+.++++..++.. +...-+.+.+..+. ..+.+ -
T Consensus 179 ~~~i~i~~gas~~~K~wp~e~~~~l~~~l~~~~~~~vl~~g~~~-------------e~~~~~~i~~~~~~-~~l~g~~s 244 (319)
T TIGR02193 179 APYAVLLHATSRDDKTWPEERWRELARLLLARGLQIVLPWGNDA-------------EKQRAERIAEALPG-AVVLPKMS 244 (319)
T ss_pred CCEEEEEeCCCcccCCCCHHHHHHHHHHHHHCCCeEEEeCCCHH-------------HHHHHHHHHhhCCC-CeecCCCC
Confidence 445544444 443 56778889999998776777776644321 00111122222221 12332 2
Q ss_pred ccH-HHhhhccccceeeeccCchhHHHHHhcCCcEEeccCccccchhHHHHHhhhceEEEeeeccccCCcccChhHHHHH
Q 045570 346 VPQ-VEILAHKAIGGFVSHCGWNSILESLWYGVPIATWPIYAEQQLNAFRMVKELGLALDLRLDYRVGSDLVMAGDIESA 424 (468)
Q Consensus 346 vpq-~~iL~~~~~~~~i~HgG~~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~G~G~~~~~~~~~~~~~~~~~~l~~a 424 (468)
++| ..++.++++ ||+.- .|.++=|...|+|.|++ +.. .+..+.. -+|-...+-... .-...+++++.+|
T Consensus 245 L~el~ali~~a~l--~I~~D-Sgp~HlAaa~g~P~i~l-fg~---t~p~~~~-P~~~~~~~~~~~--~~~~I~~~~V~~a 314 (319)
T TIGR02193 245 LAEVAALLAGADA--VVGVD-TGLTHLAAALDKPTVTL-YGA---TDPGRTG-GYGKPNVALLGE--SGANPTPDEVLAA 314 (319)
T ss_pred HHHHHHHHHcCCE--EEeCC-ChHHHHHHHcCCCEEEE-ECC---CCHhhcc-cCCCCceEEccC--ccCCCCHHHHHHH
Confidence 333 348889998 88874 56788888999999986 221 1221210 012221111110 1348899999999
Q ss_pred HHHHh
Q 045570 425 VRCLM 429 (468)
Q Consensus 425 v~~vl 429 (468)
++++|
T Consensus 315 i~~~~ 319 (319)
T TIGR02193 315 LEELL 319 (319)
T ss_pred HHhhC
Confidence 98764
No 173
>PRK10916 ADP-heptose:LPS heptosyltransferase II; Provisional
Probab=57.60 E-value=1.8e+02 Score=27.95 Aligned_cols=38 Identities=8% Similarity=0.280 Sum_probs=34.2
Q ss_pred EEEEEcCCCCCChHHHHHHHHHHHhCCCCeEEEEEecC
Q 045570 5 ELIFVPSPGIGHLVSTLEFAKHLTDRDDRISVTILSMK 42 (468)
Q Consensus 5 ~i~~~~~p~~GH~~P~l~La~~L~~rGH~~~Vt~~~~~ 42 (468)
||+++-..+-||+.=..++.+.|+++-.+.+|++++.+
T Consensus 2 rILii~~~~iGD~il~tP~l~~Lk~~~P~a~I~~l~~~ 39 (348)
T PRK10916 2 KILVIGPSWVGDMMMSQSLYRTLKARYPQAIIDVMAPA 39 (348)
T ss_pred cEEEEccCcccHHHhHHHHHHHHHHHCCCCeEEEEech
Confidence 59999999999999999999999997555779999976
No 174
>COG1618 Predicted nucleotide kinase [Nucleotide transport and metabolism]
Probab=57.05 E-value=38 Score=28.72 Aligned_cols=38 Identities=18% Similarity=0.441 Sum_probs=32.3
Q ss_pred CcEEEEEcCCCCCChHHHHHHHHHHHhCCCCeEEE-EEecC
Q 045570 3 KAELIFVPSPGIGHLVSTLEFAKHLTDRDDRISVT-ILSMK 42 (468)
Q Consensus 3 k~~i~~~~~p~~GH~~P~l~La~~L~~rGH~~~Vt-~~~~~ 42 (468)
.++|.+.-.|+.|-..-.+.++..|.+.|.. |- |+|++
T Consensus 5 ~mki~ITG~PGvGKtTl~~ki~e~L~~~g~k--vgGf~t~E 43 (179)
T COG1618 5 AMKIFITGRPGVGKTTLVLKIAEKLREKGYK--VGGFITPE 43 (179)
T ss_pred ceEEEEeCCCCccHHHHHHHHHHHHHhcCce--eeeEEeee
Confidence 4579999999999999999999999999955 54 56654
No 175
>COG0801 FolK 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase [Coenzyme metabolism]
Probab=56.48 E-value=22 Score=30.00 Aligned_cols=35 Identities=17% Similarity=0.150 Sum_probs=27.7
Q ss_pred EEEEeccCccccCHHHHHHHHHHHHhCCCcEEEEE
Q 045570 273 VVFLCFGSSGSFDVAQVKEIAIGLERSGYNFLWSL 307 (468)
Q Consensus 273 vv~vs~GS~~~~~~~~~~~~~~al~~~~~~~iw~~ 307 (468)
.+|+|+||.......+++..+++|.+.+.--|+..
T Consensus 3 ~vyl~LGSNlgd~~~~l~~A~~~L~~~~~~~v~~~ 37 (160)
T COG0801 3 RVYLGLGSNLGDRLKQLRAALAALDALADIRVVAV 37 (160)
T ss_pred EEEEEecCCCCCHHHHHHHHHHHHHhCCCceEEEe
Confidence 69999999888777889999999988765334443
No 176
>cd03791 GT1_Glycogen_synthase_DULL1_like This family is most closely related to the GT1 family of glycosyltransferases. Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms.
Probab=55.76 E-value=68 Score=32.46 Aligned_cols=21 Identities=19% Similarity=0.191 Sum_probs=17.9
Q ss_pred HHHHHHHHHhCCCCeEEEEEecC
Q 045570 20 TLEFAKHLTDRDDRISVTILSMK 42 (468)
Q Consensus 20 ~l~La~~L~~rGH~~~Vt~~~~~ 42 (468)
.-.|+++|+++||+ |+++++.
T Consensus 22 ~~~L~~aL~~~G~~--V~Vi~p~ 42 (476)
T cd03791 22 VGALPKALAKLGHD--VRVIMPK 42 (476)
T ss_pred HHHHHHHHHHCCCe--EEEEecC
Confidence 35699999999999 9999875
No 177
>PRK00346 surE 5'(3')-nucleotidase/polyphosphatase; Provisional
Probab=55.57 E-value=1.1e+02 Score=28.19 Aligned_cols=22 Identities=18% Similarity=0.206 Sum_probs=17.7
Q ss_pred HHHHHHHHHhCCCCeEEEEEecCCC
Q 045570 20 TLEFAKHLTDRDDRISVTILSMKLA 44 (468)
Q Consensus 20 ~l~La~~L~~rGH~~~Vt~~~~~~~ 44 (468)
+.+|+++|.+. |+ |+++.|...
T Consensus 16 i~aL~~~l~~~-~~--V~VvAP~~~ 37 (250)
T PRK00346 16 IRALAEALREL-AD--VTVVAPDRE 37 (250)
T ss_pred HHHHHHHHHhC-CC--EEEEeCCCC
Confidence 67889999988 68 999998633
No 178
>PF04127 DFP: DNA / pantothenate metabolism flavoprotein; InterPro: IPR007085 This entry represents the C-terminal domain found in DNA/pantothenate metabolism flavoproteins, which affects synthesis of DNA and pantothenate metabolism. These proteins contain ATP, phosphopantothenate, and cysteine binding sites. The structure of this domain has been determined in human phosphopantothenoylcysteine (PPC) synthetase [] and as the PPC synthase domain (CoaB) from the Escherichia coli coenzyme A bifunctional protein CoaBC []. This domain adopts a 3-layer alpha/beta/alpha fold with mixed beta-sheets, which topologically resembles a combination of Rossmann-like and ribokinase-like folds. The structure of these proteins predicts a ping pong mechanism with initial formation of an acyladenylate intermediate, followed by release of pyrophosphate and attack by cysteine to form the final products PPC and AMP. ; PDB: 1U7W_A 1U7U_A 1U80_C 1U7Z_A 1P9O_B 2GK4_A.
Probab=55.50 E-value=7.2 Score=33.94 Aligned_cols=39 Identities=15% Similarity=0.238 Sum_probs=28.0
Q ss_pred CCcEEEEEcCCCCCChHHH------------HHHHHHHHhCCCCeEEEEEecC
Q 045570 2 KKAELIFVPSPGIGHLVST------------LEFAKHLTDRDDRISVTILSMK 42 (468)
Q Consensus 2 ~k~~i~~~~~p~~GH~~P~------------l~La~~L~~rGH~~~Vt~~~~~ 42 (468)
+.+||++...|++=.+.|. ..||+++..|||+ |+++.++
T Consensus 2 ~gk~vlITaG~T~E~iD~VR~ItN~SSG~~G~~lA~~~~~~Ga~--V~li~g~ 52 (185)
T PF04127_consen 2 KGKKVLITAGPTREPIDPVRFITNRSSGKMGAALAEEAARRGAE--VTLIHGP 52 (185)
T ss_dssp TT-EEEEEESB-EEESSSSEEEEES--SHHHHHHHHHHHHTT-E--EEEEE-T
T ss_pred CCCEEEEECCCccccCCCceEecCCCcCHHHHHHHHHHHHCCCE--EEEEecC
Confidence 4557777777777666663 6899999999988 9999986
No 179
>COG0003 ArsA Predicted ATPase involved in chromosome partitioning [Cell division and chromosome partitioning]
Probab=54.76 E-value=1.3e+02 Score=28.88 Aligned_cols=41 Identities=20% Similarity=0.356 Sum_probs=32.3
Q ss_pred cEEEEEcC-CCCCChHHHHHHHHHHHhCCCCeEEEEEecCCCCC
Q 045570 4 AELIFVPS-PGIGHLVSTLEFAKHLTDRDDRISVTILSMKLAVA 46 (468)
Q Consensus 4 ~~i~~~~~-p~~GH~~P~l~La~~L~~rGH~~~Vt~~~~~~~~~ 46 (468)
.||++++. ++-|-..=.-++|-.|++.|+. |.++++.+.++
T Consensus 2 ~riv~f~GKGGVGKTT~aaA~A~~lA~~g~k--vLlvStDPAhs 43 (322)
T COG0003 2 TRIVFFTGKGGVGKTTIAAATAVKLAESGKK--VLLVSTDPAHS 43 (322)
T ss_pred cEEEEEecCCcccHHHHHHHHHHHHHHcCCc--EEEEEeCCCCc
Confidence 35666665 5899999999999999999976 77887765554
No 180
>PF02441 Flavoprotein: Flavoprotein; InterPro: IPR003382 This entry contains a diverse range of flavoprotein enzymes, including epidermin biosynthesis protein, EpiD, which has been shown to be a flavoprotein that binds FMN []. This enzyme catalyzes the removal of two reducing equivalents from the cysteine residue of the C-terminal meso-lanthionine of epidermin to form a --C==C-- double bond. This family also includes the B chain of dipicolinate synthase a small polar molecule that accumulates to high concentrations in bacterial endospores, and is thought to play a role in spore heat resistance, or the maintenance of heat resistance []. Dipicolinate synthase catalyses the formation of dipicolinic acid from dihydroxydipicolinic acid. This family also includes phenylacrylic acid decarboxylase 4.1.1 from EC [].; GO: 0003824 catalytic activity; PDB: 3QJG_L 1G63_G 1G5Q_L 1P3Y_1 1QZU_A 1E20_A 1MVN_A 1MVL_A 3ZQU_A 2EJB_A ....
Probab=53.97 E-value=17 Score=29.35 Aligned_cols=36 Identities=8% Similarity=0.117 Sum_probs=29.6
Q ss_pred cEEEEEcCCCCCChHHHHHHHHHHHhCCCCeEEEEEecC
Q 045570 4 AELIFVPSPGIGHLVSTLEFAKHLTDRDDRISVTILSMK 42 (468)
Q Consensus 4 ~~i~~~~~p~~GH~~P~l~La~~L~~rGH~~~Vt~~~~~ 42 (468)
+||++...++.+=.. ...+.+.|.++|++ |.++.++
T Consensus 1 k~i~l~vtGs~~~~~-~~~~l~~L~~~g~~--v~vv~S~ 36 (129)
T PF02441_consen 1 KRILLGVTGSIAAYK-APDLLRRLKRAGWE--VRVVLSP 36 (129)
T ss_dssp -EEEEEE-SSGGGGG-HHHHHHHHHTTTSE--EEEEESH
T ss_pred CEEEEEEECHHHHHH-HHHHHHHHhhCCCE--EEEEECC
Confidence 368888888877777 99999999999988 8888876
No 181
>PF04413 Glycos_transf_N: 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase); InterPro: IPR007507 This is a domain found in proteins that transfer activated sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. Proteins bearing this domain transfer UDP, ADP, GDP or CMP linked sugars. This region is flanked at the N terminus by a signal peptide and at the C terminus by a glycosyl transferase group 1 domain (IPR001296 from INTERPRO). The eukaryotic glycogen synthases may be distant members of this bacterial family [].; GO: 0005529 sugar binding, 0016740 transferase activity, 0005975 carbohydrate metabolic process; PDB: 2XCI_A 2XCU_B.
Probab=53.22 E-value=27 Score=30.38 Aligned_cols=98 Identities=18% Similarity=0.223 Sum_probs=42.1
Q ss_pred EEEcCCCCCChHHHHHHHHHHHhC--CCCeEEEEEecCCCCChhhhhhhcccCCCCCCeEEEeCCCCCCCCCCCcCCChH
Q 045570 7 IFVPSPGIGHLVSTLEFAKHLTDR--DDRISVTILSMKLAVAPWVDAYTKSLTDSQPRICVIDLPPVDPPLPDVLKKSPE 84 (468)
Q Consensus 7 ~~~~~p~~GH~~P~l~La~~L~~r--GH~~~Vt~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 84 (468)
+.+=..+.|-++-...|+++|.++ |+.+-||+.|+. .. ....... .+.+...-+|. |
T Consensus 24 iWiHa~SvGE~~a~~~Li~~l~~~~p~~~illT~~T~t-----g~-~~~~~~~--~~~v~~~~~P~-----------D-- 82 (186)
T PF04413_consen 24 IWIHAASVGEVNAARPLIKRLRKQRPDLRILLTTTTPT-----GR-EMARKLL--PDRVDVQYLPL-----------D-- 82 (186)
T ss_dssp EEEE-SSHHHHHHHHHHHHHHTT---TS-EEEEES-CC-----HH-HHHHGG---GGG-SEEE--------------S--
T ss_pred EEEEECCHHHHHHHHHHHHHHHHhCCCCeEEEEecCCc-----hH-HHHHHhC--CCCeEEEEeCc-----------c--
Confidence 333456789999999999999998 666333333322 11 1111110 11122221221 1
Q ss_pred HHHHHHHHhhchhHHHHHHhhhccCCCCccEEE-EcCC-cchHHHHHHHcCCCeEEEe
Q 045570 85 YFISLVVESHLPNVKNIVSSRSNSGSLQVTGLV-LDFF-CVSMVDIAKELSLPSYMFL 140 (468)
Q Consensus 85 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~D~vv-~D~~-~~~~~~~A~~lgiP~v~~~ 140 (468)
....++..++.+ +||++| ++.- .+.-...|++.|||++.+.
T Consensus 83 ---------~~~~~~rfl~~~------~P~~~i~~EtElWPnll~~a~~~~ip~~LvN 125 (186)
T PF04413_consen 83 ---------FPWAVRRFLDHW------RPDLLIWVETELWPNLLREAKRRGIPVVLVN 125 (186)
T ss_dssp ---------SHHHHHHHHHHH--------SEEEEES----HHHHHH-----S-EEEEE
T ss_pred ---------CHHHHHHHHHHh------CCCEEEEEccccCHHHHHHHhhcCCCEEEEe
Confidence 112344556666 778666 4442 3344677889999988754
No 182
>PF07429 Glyco_transf_56: 4-alpha-L-fucosyltransferase glycosyl transferase group 56; InterPro: IPR009993 This family contains the bacterial enzyme 4-alpha-L-fucosyltransferase (Fuc4NAc transferase) (approximately 360 residues long). This catalyses the synthesis of Fuc4NAc-ManNAcA-GlcNAc-PP-Und (lipid III) as part of the biosynthetic pathway of enterobacterial common antigen (ECA), a polysaccharide comprised of the trisaccharide repeat unit Fuc4NAc-ManNAcA-GlcNAc [].; GO: 0008417 fucosyltransferase activity, 0009246 enterobacterial common antigen biosynthetic process, 0009276 Gram-negative-bacterium-type cell wall
Probab=51.94 E-value=56 Score=31.39 Aligned_cols=81 Identities=17% Similarity=0.174 Sum_probs=61.6
Q ss_pred CeEEE-Eecc---HHHhhhccccceeeec--cCchhHHHHHhcCCcEEeccCccccchhHHHHHhhhceEEEeeeccccC
Q 045570 339 RGMIW-GWVP---QVEILAHKAIGGFVSH--CGWNSILESLWYGVPIATWPIYAEQQLNAFRMVKELGLALDLRLDYRVG 412 (468)
Q Consensus 339 ~~~v~-~~vp---q~~iL~~~~~~~~i~H--gG~~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~G~G~~~~~~~~~~ 412 (468)
++.+. +++| +..+|..++++-|.|. =|.|++.-.++.|+|++.- .+-+.|-.. ++. |+=+-..
T Consensus 246 ~~~iL~e~mpf~eYl~lL~~cDl~if~~~RQQgiGnI~lLl~~G~~v~L~---~~np~~~~l-~~~-~ipVlf~------ 314 (360)
T PF07429_consen 246 NFQILTEFMPFDEYLALLSRCDLGIFNHNRQQGIGNICLLLQLGKKVFLS---RDNPFWQDL-KEQ-GIPVLFY------ 314 (360)
T ss_pred ceeEhhhhCCHHHHHHHHHhCCEEEEeechhhhHhHHHHHHHcCCeEEEe---cCChHHHHH-HhC-CCeEEec------
Confidence 55543 5666 7779999999877775 5899999999999999876 556666644 555 7666544
Q ss_pred CcccChhHHHHHHHHHhc
Q 045570 413 SDLVMAGDIESAVRCLMD 430 (468)
Q Consensus 413 ~~~~~~~~l~~av~~vl~ 430 (468)
.+.++...|++|=+++..
T Consensus 315 ~d~L~~~~v~ea~rql~~ 332 (360)
T PF07429_consen 315 GDELDEALVREAQRQLAN 332 (360)
T ss_pred cccCCHHHHHHHHHHHhh
Confidence 348999999999888764
No 183
>cd07025 Peptidase_S66 LD-Carboxypeptidase, a serine protease, includes microcin C7 self immunity protein. LD-carboxypeptidase (Muramoyltetrapeptide carboxypeptidase; EC 3.4.17.13; Merops family S66; initially described as Carboxypeptidase II) family also includes the microcin c7 self-immunity protein (MccF) as well as uncharacterized proteins including hypothetical proteins. LD-carboxypeptidase hydrolyzes the amide bond that links the dibasic amino acids to C-terminal D-amino acids. The physiological substrates of LD-carboxypeptidase are tetrapeptide fragments (such as UDP-MurNAc-tetrapeptides) that are produced when bacterial cell walls are degraded; they contain an L-configured residue (L-lysine or meso-diaminopimelic acid residue) as the penultimate residue and D-alanine as the ultimate residue. A possible role of LD-carboxypeptidase is in peptidoglycan recycling whereby the resulting tripeptide (precursor for murein synthesis) can be reconverted into peptidoglycan by attachment o
Probab=51.63 E-value=28 Score=32.67 Aligned_cols=75 Identities=15% Similarity=0.217 Sum_probs=45.8
Q ss_pred ccCHHHHHHHHHHHHhCCCcEEEEEecCCCCCccccccccCCCCCCchhHHHHhcCCeEEEEeccHHHhhhccccceeee
Q 045570 283 SFDVAQVKEIAIGLERSGYNFLWSLRVSSPKDEVSAHRYVTNNGVFPEGFLERIKGRGMIWGWVPQVEILAHKAIGGFVS 362 (468)
Q Consensus 283 ~~~~~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~v~~~vpq~~iL~~~~~~~~i~ 362 (468)
..+.+..+++.+++.+..++.||..+++.. ..++.++++...+-.||.. ||-
T Consensus 45 ~s~~~Ra~dL~~a~~d~~i~aI~~~rGG~g--------------------------a~rlL~~ld~~~~~~~pK~--~iG 96 (282)
T cd07025 45 GTDEERAADLNAAFADPEIKAIWCARGGYG--------------------------ANRLLPYLDYDLIRANPKI--FVG 96 (282)
T ss_pred CCHHHHHHHHHHHhhCCCCCEEEEcCCcCC--------------------------HHHhhhhCCHHHHhhCCeE--EEE
Confidence 444566888999999999999999987621 1123344444444455554 555
Q ss_pred ccCchhHHHHHhc--CCcEEeccCc
Q 045570 363 HCGWNSILESLWY--GVPIATWPIY 385 (468)
Q Consensus 363 HgG~~s~~eal~~--GvP~v~~P~~ 385 (468)
..-..+++-+++. |++.+--|..
T Consensus 97 ySDiTaL~~~l~~~~g~~t~hGp~~ 121 (282)
T cd07025 97 YSDITALHLALYAKTGLVTFHGPML 121 (282)
T ss_pred ecHHHHHHHHHHHhcCceEEECccc
Confidence 5555555555542 5555555543
No 184
>COG2185 Sbm Methylmalonyl-CoA mutase, C-terminal domain/subunit (cobalamin-binding) [Lipid metabolism]
Probab=50.66 E-value=26 Score=28.92 Aligned_cols=37 Identities=19% Similarity=0.087 Sum_probs=32.5
Q ss_pred CCCcEEEEEcCCCCCChHHHHHHHHHHHhCCCCeEEEEE
Q 045570 1 MKKAELIFVPSPGIGHLVSTLEFAKHLTDRDDRISVTIL 39 (468)
Q Consensus 1 m~k~~i~~~~~p~~GH~~P~l~La~~L~~rGH~~~Vt~~ 39 (468)
|+|+||++.+.+.-||=.=.--+++.|+..|.+ |...
T Consensus 10 g~rprvlvak~GlDgHd~gakvia~~l~d~Gfe--Vi~~ 46 (143)
T COG2185 10 GARPRVLVAKLGLDGHDRGAKVIARALADAGFE--VINL 46 (143)
T ss_pred CCCceEEEeccCccccccchHHHHHHHHhCCce--EEec
Confidence 578999999999999999999999999999955 5443
No 185
>COG2327 WcaK Polysaccharide pyruvyl transferase family protein [Cell wall/membrane/envelope biogenesis]
Probab=50.40 E-value=54 Score=32.07 Aligned_cols=77 Identities=22% Similarity=0.257 Sum_probs=53.1
Q ss_pred HHhhhccccceeeeccCchhHHHHHhcCCcEEeccCccccchhHHHHHhhhceE-EEeeeccccCCcccChhHHHHHHHH
Q 045570 349 VEILAHKAIGGFVSHCGWNSILESLWYGVPIATWPIYAEQQLNAFRMVKELGLA-LDLRLDYRVGSDLVMAGDIESAVRC 427 (468)
Q Consensus 349 ~~iL~~~~~~~~i~HgG~~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~G~G-~~~~~~~~~~~~~~~~~~l~~av~~ 427 (468)
..+++++++ +|. .-+-|+.-|++.|+|.+++-+ |+.+...+ +.+|+- ..++ ...++.+.+.+++.+
T Consensus 280 ~~~l~~~dl--~Vg-~R~HsaI~al~~g~p~i~i~Y---~~K~~~l~-~~~gl~~~~~~------i~~~~~~~l~~~~~e 346 (385)
T COG2327 280 GGILAACDL--IVG-MRLHSAIMALAFGVPAIAIAY---DPKVRGLM-QDLGLPGFAID------IDPLDAEILSAVVLE 346 (385)
T ss_pred HHHhccCce--EEe-ehhHHHHHHHhcCCCeEEEee---cHHHHHHH-HHcCCCccccc------CCCCchHHHHHHHHH
Confidence 446777775 443 346688999999999998855 55555343 334654 2233 348899999999999
Q ss_pred HhcCcHHHHHH
Q 045570 428 LMDGENKIRKK 438 (468)
Q Consensus 428 vl~~~~~~~~~ 438 (468)
.++++++.+++
T Consensus 347 ~~~~~~~~~~~ 357 (385)
T COG2327 347 RLTKLDELRER 357 (385)
T ss_pred HHhccHHHHhh
Confidence 99866766555
No 186
>PF08766 DEK_C: DEK C terminal domain; InterPro: IPR014876 DEK is a chromatin associated protein that is linked with cancers and autoimmune disease. This domain is found at the C-terminal of DEK and is of clinical importance since it can reverse the characteristic abnormal DNA-mutagen sensitivity in fibroblasts from ataxia-telangiectasia (A-T) patients []. The structure of this domain shows it to be homologous to the E2F/DP transcription factor family []. This domain is also found in chitin synthase proteins like Q8TF96 from SWISSPROT, and in protein phosphatases such as Q6NN85 from SWISSPROT. ; PDB: 1Q1V_A.
Probab=50.02 E-value=47 Score=22.13 Aligned_cols=50 Identities=18% Similarity=0.114 Sum_probs=23.3
Q ss_pred ChhHHHHHHHHHhcCcHHHHHHHHHHHHHHHHhhhcCCChHH-HHHHHHHh
Q 045570 417 MAGDIESAVRCLMDGENKIRKKVKEMAEISRKSLMEGGSSFN-SIGQFISL 466 (468)
Q Consensus 417 ~~~~l~~av~~vl~~~~~~~~~a~~l~~~~~~~~~~gg~~~~-~~~~~~~~ 466 (468)
|.++|+++|+++|.+.+--.--.+.+.+.+.+..+-.=+++. .++++|..
T Consensus 1 td~~i~~~i~~iL~~~dl~~vT~k~vr~~Le~~~~~dL~~~K~~I~~~I~~ 51 (54)
T PF08766_consen 1 TDEEIREAIREILREADLDTVTKKQVREQLEERFGVDLSSRKKFIKELIDE 51 (54)
T ss_dssp -HHHHHHHHHHHHTTS-GGG--HHHHHHHHHHH-SS--SHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhCCHhHhhHHHHHHHHHHHHCCCcHHHHHHHHHHHHH
Confidence 467888999999874221111123344444444332333332 66666654
No 187
>TIGR02201 heptsyl_trn_III lipopolysaccharide heptosyltransferase III, putative. This family consists of examples of the putative ADP-heptose:LPS heptosyltransferase III, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria. This enzyme may be less widely distributed than heptosyltransferases I and II.
Probab=49.62 E-value=93 Score=29.94 Aligned_cols=106 Identities=14% Similarity=0.211 Sum_probs=62.5
Q ss_pred HHhhhcCC-CCcEEEEeccCcc---ccCHHHHHHHHHHHHhCCCcEEEEEecCCCCCccccccccCCCCCCchhHHHHhc
Q 045570 262 FQWLDDLA-ESSVVFLCFGSSG---SFDVAQVKEIAIGLERSGYNFLWSLRVSSPKDEVSAHRYVTNNGVFPEGFLERIK 337 (468)
Q Consensus 262 ~~~l~~~~-~~~vv~vs~GS~~---~~~~~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~ 337 (468)
.+++...+ .++.|.+.-|+.. ..+.+.+.++++.|...+.++++.-+.... +..+-+.+.+..+
T Consensus 171 ~~~l~~~~~~~~~i~i~p~a~~~~K~Wp~e~~~~l~~~l~~~~~~ivl~g~p~~~------------e~~~~~~i~~~~~ 238 (344)
T TIGR02201 171 RALLDEAGVGQNYIVIQPTSRWFFKCWDNDRFSALIDALHARGYEVVLTSGPDKD------------ELAMVNEIAQGCQ 238 (344)
T ss_pred HHHHHhcCCCCCEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEecCCCHH------------HHHHHHHHHhhCC
Confidence 34444321 3456777777653 567788899998887777887765332100 0001111111111
Q ss_pred C-Ce-EEEE--eccHH-HhhhccccceeeeccCchhHHHHHhcCCcEEec
Q 045570 338 G-RG-MIWG--WVPQV-EILAHKAIGGFVSHCGWNSILESLWYGVPIATW 382 (468)
Q Consensus 338 ~-~~-~v~~--~vpq~-~iL~~~~~~~~i~HgG~~s~~eal~~GvP~v~~ 382 (468)
. ++ .+++ -+.+. .++.++++ ||+. -.|-++=|.+.|+|.|++
T Consensus 239 ~~~~~~l~g~~sL~el~ali~~a~l--~Vs~-DSGp~HlAaA~g~p~v~L 285 (344)
T TIGR02201 239 TPRVTSLAGKLTLPQLAALIDHARL--FIGV-DSVPMHMAAALGTPLVAL 285 (344)
T ss_pred CCcccccCCCCCHHHHHHHHHhCCE--EEec-CCHHHHHHHHcCCCEEEE
Confidence 1 11 1222 23333 48889998 9998 678899999999999986
No 188
>PLN02470 acetolactate synthase
Probab=48.10 E-value=2e+02 Score=30.22 Aligned_cols=92 Identities=16% Similarity=0.166 Sum_probs=50.5
Q ss_pred eccCccccCHHH--HHHHHHHHHhCCCcEEEEEecCCCCCccccccccCCCCCCchhHHHHhcCCeEEEEec-cHHHhh-
Q 045570 277 CFGSSGSFDVAQ--VKEIAIGLERSGYNFLWSLRVSSPKDEVSAHRYVTNNGVFPEGFLERIKGRGMIWGWV-PQVEIL- 352 (468)
Q Consensus 277 s~GS~~~~~~~~--~~~~~~al~~~~~~~iw~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~v~~~v-pq~~iL- 352 (468)
+|||....+... -+.|++.|++.|++.|+-+.+..... +-+.+. ...+++++.-- .+...+
T Consensus 2 ~~~~~~~~~~~~~~a~~l~~~L~~~GV~~vFg~pG~~~~~-------------l~dal~--~~~~i~~i~~rhE~~A~~~ 66 (585)
T PLN02470 2 TFQSRFAPDEPRKGADILVEALEREGVDTVFAYPGGASME-------------IHQALT--RSNCIRNVLCRHEQGEVFA 66 (585)
T ss_pred CcccCCCCCccccHHHHHHHHHHHcCCCEEEEcCCcccHH-------------HHHHHh--ccCCceEEEeccHHHHHHH
Confidence 467765433322 45678888888888888776652111 111111 01122222110 111111
Q ss_pred ------hccccceeeeccCch------hHHHHHhcCCcEEecc
Q 045570 353 ------AHKAIGGFVSHCGWN------SILESLWYGVPIATWP 383 (468)
Q Consensus 353 ------~~~~~~~~i~HgG~~------s~~eal~~GvP~v~~P 383 (468)
.+-..+++++|.|-| ++.+|...++|+|++.
T Consensus 67 Adgyar~tg~~gv~~~t~GPG~~N~l~gia~A~~~~~Pvl~I~ 109 (585)
T PLN02470 67 AEGYAKASGKVGVCIATSGPGATNLVTGLADALLDSVPLVAIT 109 (585)
T ss_pred HHHHHHHhCCCEEEEECCCccHHHHHHHHHHHHhcCCcEEEEe
Confidence 112345588999855 7889999999999985
No 189
>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional
Probab=47.85 E-value=46 Score=36.03 Aligned_cols=107 Identities=16% Similarity=0.085 Sum_probs=59.6
Q ss_pred EEEeccHHH---hhhccccceeeec---cCch-hHHHHHhcCCcEEeccCccccchhHHHHHhhhceEEEeeeccccCCc
Q 045570 342 IWGWVPQVE---ILAHKAIGGFVSH---CGWN-SILESLWYGVPIATWPIYAEQQLNAFRMVKELGLALDLRLDYRVGSD 414 (468)
Q Consensus 342 v~~~vpq~~---iL~~~~~~~~i~H---gG~~-s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~G~G~~~~~~~~~~~~ 414 (468)
+.+++++.+ ++..+++ |+.- -|+| .+.|++++|+|-...|+..+--.-+..+ .-|+.++
T Consensus 346 ~~~~~~~~~l~~ly~~aDv--~v~~S~~EG~~lv~~Eama~~~~~~g~~vls~~~G~~~~l----~~~llv~-------- 411 (726)
T PRK14501 346 FYRSLPFEELVALYRAADV--ALVTPLRDGMNLVAKEYVASRTDGDGVLILSEMAGAAAEL----AEALLVN-------- 411 (726)
T ss_pred EeCCCCHHHHHHHHHhccE--EEecccccccCcccceEEEEcCCCCceEEEecccchhHHh----CcCeEEC--------
Confidence 446778775 5666777 6653 3555 7789999977522222221111111111 2256665
Q ss_pred ccChhHHHHHHHHHhcCc-HHHHHHHHHHHHHHHHhhhcCCChHHHHHHHHHhh
Q 045570 415 LVMAGDIESAVRCLMDGE-NKIRKKVKEMAEISRKSLMEGGSSFNSIGQFISLN 467 (468)
Q Consensus 415 ~~~~~~l~~av~~vl~~~-~~~~~~a~~l~~~~~~~~~~gg~~~~~~~~~~~~~ 467 (468)
..+.++++++|.++++.+ ++.+++.+++.+.++ .-+...-++++++.+
T Consensus 412 P~d~~~la~ai~~~l~~~~~e~~~r~~~~~~~v~-----~~~~~~w~~~~l~~l 460 (726)
T PRK14501 412 PNDIEGIAAAIKRALEMPEEEQRERMQAMQERLR-----RYDVHKWASDFLDEL 460 (726)
T ss_pred CCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH-----hCCHHHHHHHHHHHH
Confidence 557899999999999732 244444444444333 235555566666543
No 190
>PF05225 HTH_psq: helix-turn-helix, Psq domain; InterPro: IPR007889 This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster []. In pipsqueak this domain binds to GAGA sequence []. The pipsqueak family, which includes proteins from fungi, sea urchins, nematodes, insects, and vertebrates appear to be proteins essential for sequence-specific targeting of a polycomb group protein complex [].; GO: 0003677 DNA binding; PDB: 2COB_A.
Probab=47.73 E-value=27 Score=22.35 Aligned_cols=26 Identities=27% Similarity=0.493 Sum_probs=18.7
Q ss_pred ChhHHHHHHHHHhcCcHHHHHHHHHH
Q 045570 417 MAGDIESAVRCLMDGENKIRKKVKEM 442 (468)
Q Consensus 417 ~~~~l~~av~~vl~~~~~~~~~a~~l 442 (468)
|+++|.+||..+.++.-++++.|+..
T Consensus 1 tee~l~~Ai~~v~~g~~S~r~AA~~y 26 (45)
T PF05225_consen 1 TEEDLQKAIEAVKNGKMSIRKAAKKY 26 (45)
T ss_dssp -HHHHHHHHHHHHTTSS-HHHHHHHH
T ss_pred CHHHHHHHHHHHHhCCCCHHHHHHHH
Confidence 57899999999987435777777654
No 191
>PRK14099 glycogen synthase; Provisional
Probab=47.69 E-value=31 Score=35.28 Aligned_cols=89 Identities=16% Similarity=0.222 Sum_probs=49.1
Q ss_pred CCe-EEEEeccHHH-hh-hccccceeee---ccCch-hHHHHHhcCCcEEeccCcc--ccchhHHHH---HhhhceEEEe
Q 045570 338 GRG-MIWGWVPQVE-IL-AHKAIGGFVS---HCGWN-SILESLWYGVPIATWPIYA--EQQLNAFRM---VKELGLALDL 405 (468)
Q Consensus 338 ~~~-~v~~~vpq~~-iL-~~~~~~~~i~---HgG~~-s~~eal~~GvP~v~~P~~~--DQ~~na~~~---~~~~G~G~~~ 405 (468)
+++ .+.+|-.+.. ++ +.+++ ||. +=|+| +.+||+++|+|.|+.-..+ |--...... +.. +.|..+
T Consensus 350 ~~v~~~~G~~~~l~~~~~a~aDi--fv~PS~~E~fGl~~lEAma~G~ppVvs~~GGl~d~V~~~~~~~~~~~~-~~G~l~ 426 (485)
T PRK14099 350 GQIGVVIGYDEALAHLIQAGADA--LLVPSRFEPCGLTQLCALRYGAVPVVARVGGLADTVVDANEMAIATGV-ATGVQF 426 (485)
T ss_pred CCEEEEeCCCHHHHHHHHhcCCE--EEECCccCCCcHHHHHHHHCCCCcEEeCCCCccceeecccccccccCC-CceEEe
Confidence 444 3456633322 23 34677 774 33443 6789999997777665432 322111100 111 457766
Q ss_pred eeccccCCcccChhHHHHHHHH---HhcCcHHHHHH
Q 045570 406 RLDYRVGSDLVMAGDIESAVRC---LMDGENKIRKK 438 (468)
Q Consensus 406 ~~~~~~~~~~~~~~~l~~av~~---vl~~~~~~~~~ 438 (468)
+ .-+.+++.+++.+ +++ |+..+++
T Consensus 427 ~--------~~d~~~La~ai~~a~~l~~-d~~~~~~ 453 (485)
T PRK14099 427 S--------PVTADALAAALRKTAALFA-DPVAWRR 453 (485)
T ss_pred C--------CCCHHHHHHHHHHHHHHhc-CHHHHHH
Confidence 6 4578999999987 555 5544433
No 192
>PRK08305 spoVFB dipicolinate synthase subunit B; Reviewed
Probab=47.53 E-value=23 Score=31.04 Aligned_cols=39 Identities=15% Similarity=0.047 Sum_probs=29.6
Q ss_pred CCcEEEEEcCCCCCChHHHHHHHHHHHhCCCCeEEEEEecC
Q 045570 2 KKAELIFVPSPGIGHLVSTLEFAKHLTDRDDRISVTILSMK 42 (468)
Q Consensus 2 ~k~~i~~~~~p~~GH~~P~l~La~~L~~rGH~~~Vt~~~~~ 42 (468)
+.+||++--.++-|=+.-...|++.|.++||+ |.++.++
T Consensus 4 ~~k~IllgVTGsiaa~k~a~~lir~L~k~G~~--V~vv~T~ 42 (196)
T PRK08305 4 KGKRIGFGLTGSHCTYDEVMPEIEKLVDEGAE--VTPIVSY 42 (196)
T ss_pred CCCEEEEEEcCHHHHHHHHHHHHHHHHhCcCE--EEEEECH
Confidence 45578777777555444479999999999988 8888776
No 193
>cd01840 SGNH_hydrolase_yrhL_like yrhL-like subfamily of SGNH-hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases. Most members of this sub-family appear to co-occur with N-terminal acyltransferase domains. Might be involved in lipid metabolism.
Probab=47.22 E-value=57 Score=26.98 Aligned_cols=38 Identities=18% Similarity=0.251 Sum_probs=30.2
Q ss_pred CCcEEEEeccCccccCHHHHHHHHHHHHhCCCcEEEEEe
Q 045570 270 ESSVVFLCFGSSGSFDVAQVKEIAIGLERSGYNFLWSLR 308 (468)
Q Consensus 270 ~~~vv~vs~GS~~~~~~~~~~~~~~al~~~~~~~iw~~~ 308 (468)
...+|++++||......+.++++++.+. .+.++++...
T Consensus 50 ~~d~vvi~lGtNd~~~~~nl~~ii~~~~-~~~~ivlv~~ 87 (150)
T cd01840 50 LRKTVVIGLGTNGPFTKDQLDELLDALG-PDRQVYLVNP 87 (150)
T ss_pred CCCeEEEEecCCCCCCHHHHHHHHHHcC-CCCEEEEEEC
Confidence 3459999999998878888999999884 4678777654
No 194
>TIGR00715 precor6x_red precorrin-6x reductase. This enzyme was found to be a monomer by gel filtration.
Probab=45.76 E-value=69 Score=29.51 Aligned_cols=15 Identities=27% Similarity=0.220 Sum_probs=13.0
Q ss_pred HHHHHHHHHhCCCCe
Q 045570 20 TLEFAKHLTDRDDRI 34 (468)
Q Consensus 20 ~l~La~~L~~rGH~~ 34 (468)
--.|++.|.++||++
T Consensus 12 gr~la~~L~~~g~~v 26 (256)
T TIGR00715 12 SRAIAKGLIAQGIEI 26 (256)
T ss_pred HHHHHHHHHhCCCeE
Confidence 678999999999984
No 195
>PRK13934 stationary phase survival protein SurE; Provisional
Probab=45.56 E-value=2.2e+02 Score=26.46 Aligned_cols=23 Identities=4% Similarity=0.017 Sum_probs=18.0
Q ss_pred HHHHHHHHHHHhCCCCeEEEEEecCC
Q 045570 18 VSTLEFAKHLTDRDDRISVTILSMKL 43 (468)
Q Consensus 18 ~P~l~La~~L~~rGH~~~Vt~~~~~~ 43 (468)
.=+.+|+++|.+.| + |+++.|..
T Consensus 14 pGi~aL~~al~~~g-~--V~VvAP~~ 36 (266)
T PRK13934 14 PGLRLLYEFVSPLG-E--VDVVAPET 36 (266)
T ss_pred HHHHHHHHHHHhCC-c--EEEEccCC
Confidence 34678999998887 7 88888863
No 196
>PRK09620 hypothetical protein; Provisional
Probab=44.40 E-value=33 Score=30.99 Aligned_cols=40 Identities=15% Similarity=0.140 Sum_probs=30.2
Q ss_pred CCCcEEEEEcCCCCCChHHH------------HHHHHHHHhCCCCeEEEEEecC
Q 045570 1 MKKAELIFVPSPGIGHLVST------------LEFAKHLTDRDDRISVTILSMK 42 (468)
Q Consensus 1 m~k~~i~~~~~p~~GH~~P~------------l~La~~L~~rGH~~~Vt~~~~~ 42 (468)
|+.++|++...|++=.+.|. .+||++|.++|++ |+++...
T Consensus 1 l~gk~vlITaG~T~E~iD~VR~itN~SSGfiGs~LA~~L~~~Ga~--V~li~g~ 52 (229)
T PRK09620 1 MKGKKVLITSGGCLEKWDQVRGHTNMAKGTIGRIIAEELISKGAH--VIYLHGY 52 (229)
T ss_pred CCCCEEEEeCCCccCCcCCeeEecCCCcCHHHHHHHHHHHHCCCe--EEEEeCC
Confidence 45567888877766555543 6889999999988 9888754
No 197
>PF02310 B12-binding: B12 binding domain; InterPro: IPR006158 The cobalamin (vitamin B12) binding domain can bind two different forms of the cobalamin cofactor, with cobalt bonded either to a methyl group (methylcobalamin) or to 5'-deoxyadenosine (adenosylcobalamin). Cobalamin-binding domains are mainly found in two families of enzymes present in animals and prokaryotes, which perform distinct kinds of reactions at the cobalt-carbon bond. Enzymes that require methylcobalamin carry out methyl transfer reactions. Enzymes that require adenosylcobalamin catalyse reactions in which the first step is the cleavage of adenosylcobalamin to form cob(II)alamin and the 5'-deoxyadenosyl radical, and thus act as radical generators. In both types of enzymes the B12-binding domain uses a histidine to bind the cobalt atom of cobalamin cofactors. This histidine is embedded in a DXHXXG sequence, the most conserved primary sequence motif of the domain [, , ]. Proteins containing the cobalamin-binding domain include: Animal and prokaryotic methionine synthase (2.1.1.13 from EC), which catalyse the transfer of a methyl group from methyl-cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Animal and prokaryotic methylmalonyl-CoA mutase (5.4.99.2 from EC), which are involved in the degradation of several amino acids, odd-chain fatty acids and cholesterol via propionyl-CoA to the tricarboxylic acid cycle. Prokaryotic lysine 5,6-aminomutase (5.4.3.4 from EC). Prokaryotic glutamate mutase (5.4.99.1 from EC) []. Prokaryotic methyleneglutarate mutase (5.4.99.4 from EC). Prokaryotic isobutyryl-CoA mutase (5.4.99.13 from EC). The core structure of the cobalamin-binding domain is characterised by a five-stranded alpha/beta (Rossmann) fold, which consists of 5 parallel beta-sheets surrounded by 4-5 alpha helices in three layers (alpha/beta/alpha) []. Upon binding cobalamin, important elements of the binding site appear to become structured, including an alpha-helix that forms on one side of the cleft accommodating the nucleotide 'tail' of the cofactor. In cobalamin, the cobalt atom can be either free (dmb-off) or bound to dimethylbenzimidazole (dmb-on) according to the pH. When bound to the cobalamin-binding domain, the dimethylbenzimidazole ligand is replaced by the active histidine (His-on) of the DXHXXG motif. The replacement of dimethylbenzimidazole by histidine allows switching between the catalytic and activation cycles []. In methionine synthase the cobalamin cofactor is sandwiched between the cobalamin-binding domain and an approximately 90 residues N-terminal domain forming a helical bundle comprising two pairs of antiparallel helices []. In methionine synthase, there is a second, adjacent domain involved in cobalamin binding that forms a 4-helical bundle cap (IPR003759 from INTERPRO); in the conversion to the active conformation of this enzyme, the 4-helical cap rotates to allow the cobalamin cofactor to bind the activation domain (IPR004223 from INTERPRO) [].; GO: 0031419 cobalamin binding, 0046872 metal ion binding; PDB: 1Y80_A 3BUL_A 1K7Y_A 1BMT_A 3IV9_A 1K98_A 3IVA_A 3KP1_A 3KOW_A 3KOZ_A ....
Probab=43.59 E-value=41 Score=26.48 Aligned_cols=36 Identities=25% Similarity=0.318 Sum_probs=31.6
Q ss_pred cEEEEEcCCCCCChHHHHHHHHHHHhCCCCeEEEEEec
Q 045570 4 AELIFVPSPGIGHLVSTLEFAKHLTDRDDRISVTILSM 41 (468)
Q Consensus 4 ~~i~~~~~p~~GH~~P~l~La~~L~~rGH~~~Vt~~~~ 41 (468)
.|+++...+..-|-.-+..++..|.++||+ |.++-.
T Consensus 1 ~~v~~~~~~~~~~~lGl~~la~~l~~~G~~--v~~~d~ 36 (121)
T PF02310_consen 1 IRVVLACVPGEVHPLGLLYLAAYLRKAGHE--VDILDA 36 (121)
T ss_dssp -EEEEEEBTTSSTSHHHHHHHHHHHHTTBE--EEEEES
T ss_pred CEEEEEeeCCcchhHHHHHHHHHHHHCCCe--EEEECC
Confidence 378999999999999999999999999988 877754
No 198
>cd07062 Peptidase_S66_mccF_like Microcin C7 self-immunity protein determines resistance to exogenous microcin C7. Microcin C7 self-immunity protein (mccF): MccF, a homolog of the LD-carboxypeptidase family, mediates resistance against exogenously added microcin C7 (MccC7), a ribosomally-encoded peptide antibiotic that contains a phosphoramidate linkage to adenosine monophosphate at its C-terminus. The plasmid-encoded mccF gene is transcribed in the opposite direction to the other five genes (mccA-E) and is required for the full expression of immunity but not for production. The catalytic triad residues (Ser, His, Glu) of LD-carboxypeptidase are also conserved in MccF, strongly suggesting that MccF shares the hydrolytic activity with LD-carboxypeptidases. Substrates of MccF have not been deduced, but could likely be microcin C7 precursors. The possible role of MccF is to defend producer cells against exogenous microcin from re-entering after having been exported. It is suggested that M
Probab=42.90 E-value=42 Score=31.95 Aligned_cols=28 Identities=4% Similarity=-0.009 Sum_probs=23.4
Q ss_pred ccCHHHHHHHHHHHHhCCCcEEEEEecC
Q 045570 283 SFDVAQVKEIAIGLERSGYNFLWSLRVS 310 (468)
Q Consensus 283 ~~~~~~~~~~~~al~~~~~~~iw~~~~~ 310 (468)
..+.+...++.+++.+..++.||.++++
T Consensus 49 g~~~~Ra~dL~~a~~Dp~i~aI~~~rGG 76 (308)
T cd07062 49 ASPEERAEELMAAFADPSIKAIIPTIGG 76 (308)
T ss_pred CCHHHHHHHHHHHhcCCCCCEEEECCcc
Confidence 3345668889999999999999999876
No 199
>PF01075 Glyco_transf_9: Glycosyltransferase family 9 (heptosyltransferase); InterPro: IPR002201 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 9 GT9 from CAZY comprises enzymes with two known activity; lipopolysaccharide N-acetylglucosaminyltransferase (2.4.1.56 from EC), heptosyltransferase (2.4 from EC). Heptosyltransferase I is thought to add L-glycero-D-manno-heptose to the inner 3-deoxy-D-manno-octulosonic acid (Kdo) residue of the lipopolysaccharide core []. Heptosyltransferase II is a glycosyltransferase involved in the synthesis of the inner core region of lipopolysaccharide []. Lipopolysaccharide is a major component of the outer leaflet of the outer membrane in Gram-negative bacteria. It is composed of three domains; lipid A, Core oligosaccharide and the O-antigen. These enzymes transfer heptose to the lipopolysaccharide core [].; GO: 0016757 transferase activity, transferring glycosyl groups, 0008152 metabolic process; PDB: 1PSW_A 2H1F_A 2GT1_A 3TOV_A 2H1H_A.
Probab=42.82 E-value=63 Score=29.23 Aligned_cols=98 Identities=9% Similarity=0.118 Sum_probs=50.7
Q ss_pred CCcEEEEeccCcc---ccCHHHHHHHHHHHHhCCCcEEEEEecCCCCCccccccccCCCCCCchhHHHHhcCC-eEEEE-
Q 045570 270 ESSVVFLCFGSSG---SFDVAQVKEIAIGLERSGYNFLWSLRVSSPKDEVSAHRYVTNNGVFPEGFLERIKGR-GMIWG- 344 (468)
Q Consensus 270 ~~~vv~vs~GS~~---~~~~~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~-~~v~~- 344 (468)
+++.|.+..|+.. ..+.+.+.++++.|.+.+..+++..+... .++..-+.+.+....+ +.+.+
T Consensus 104 ~~~~i~i~~~a~~~~k~wp~e~~~~l~~~l~~~~~~vvl~g~~~~------------~~~~~~~~~~~~~~~~~~~~~~~ 171 (247)
T PF01075_consen 104 DKPYIGINPGASWPSKRWPAEKWAELIERLKERGYRVVLLGGPEE------------QEKEIADQIAAGLQNPVINLAGK 171 (247)
T ss_dssp TSSEEEEE---SSGGGS--HHHHHHHHHHHCCCT-EEEE--SSHH------------HHHHHHHHHHTTHTTTTEEETTT
T ss_pred cCCeEEEeecCCCccccCCHHHHHHHHHHHHhhCceEEEEccchH------------HHHHHHHHHHHhcccceEeecCC
Confidence 3457777777754 56778899999999887866655433220 0000000111111111 22221
Q ss_pred -ecc-HHHhhhccccceeeeccCchhHHHHHhcCCcEEec
Q 045570 345 -WVP-QVEILAHKAIGGFVSHCGWNSILESLWYGVPIATW 382 (468)
Q Consensus 345 -~vp-q~~iL~~~~~~~~i~HgG~~s~~eal~~GvP~v~~ 382 (468)
-+. ...++.++++ +|+.- .|.++=|...|+|+|++
T Consensus 172 ~~l~e~~ali~~a~~--~I~~D-tg~~HlA~a~~~p~v~l 208 (247)
T PF01075_consen 172 TSLRELAALISRADL--VIGND-TGPMHLAAALGTPTVAL 208 (247)
T ss_dssp S-HHHHHHHHHTSSE--EEEES-SHHHHHHHHTT--EEEE
T ss_pred CCHHHHHHHHhcCCE--EEecC-ChHHHHHHHHhCCEEEE
Confidence 123 3458889998 88875 46788889999999998
No 200
>PF02951 GSH-S_N: Prokaryotic glutathione synthetase, N-terminal domain; InterPro: IPR004215 Prokaryotic glutathione synthetase 6.3.2.3 from EC (glutathione synthase) catalyses the conversion of gamma-L-glutamyl-L-cysteine and glycine to orthophosphate and glutathione in the presence of ATP. This is the second step in glutathione biosynthesis. The enzyme is inhibited by 7,8-dihydrofolate, methotrexate and trimethoprim. This domain is the N terminus of the enzyme.; GO: 0004363 glutathione synthase activity, 0006750 glutathione biosynthetic process; PDB: 1GLV_A 1GSA_A 1GSH_A 2GLT_A.
Probab=42.74 E-value=39 Score=27.01 Aligned_cols=36 Identities=17% Similarity=0.115 Sum_probs=23.4
Q ss_pred EEEEEcCCCCC---ChHHHHHHHHHHHhCCCCeEEEEEecC
Q 045570 5 ELIFVPSPGIG---HLVSTLEFAKHLTDRDDRISVTILSMK 42 (468)
Q Consensus 5 ~i~~~~~p~~G---H~~P~l~La~~L~~rGH~~~Vt~~~~~ 42 (468)
||+|+--|-.+ .-.-.++|+.+..+|||+ |.++.+.
T Consensus 2 ki~fvmDpi~~i~~~kDTT~alm~eAq~RGhe--v~~~~~~ 40 (119)
T PF02951_consen 2 KIAFVMDPIESIKPYKDTTFALMLEAQRRGHE--VFYYEPG 40 (119)
T ss_dssp EEEEEES-GGG--TTT-HHHHHHHHHHHTT-E--EEEE-GG
T ss_pred eEEEEeCCHHHCCCCCChHHHHHHHHHHCCCE--EEEEEcC
Confidence 46666666444 334678899999999999 8777765
No 201
>PF00731 AIRC: AIR carboxylase; InterPro: IPR000031 Phosphoribosylaminoimidazole carboxylase is a fusion protein in plants and fungi, but consists of two non-interacting proteins in bacteria, PurK and PurE. PurK, N5-carboxyaminoimidazole ribonucleotide (N5_CAIR) synthetase, catalyzes the conversion of 5-aminoimidazole ribonucleotide (AIR), ATP, and bicarbonate to N5-CAIR, ADP, and Pi. PurE converts N5-CAIR to CAIR, the sixth step of de novo purine biosynthesis. In the presence of high concentrations of bicarbonate, PurE is reported able to convert AIR to CAIR directly and without ATP. Some members of this family contain two copies of this domain []. The crystal structure of PurE indicates a unique quaternary structure that confirms the octameric nature of the enzyme [].; GO: 0004638 phosphoribosylaminoimidazole carboxylase activity, 0006189 'de novo' IMP biosynthetic process; PDB: 3TRH_O 2YWX_A 2NSL_A 1D7A_A 2NSJ_A 1QCZ_A 2ATE_A 2NSH_A 3RG8_C 3RGG_D ....
Probab=42.44 E-value=2e+02 Score=24.01 Aligned_cols=139 Identities=18% Similarity=0.226 Sum_probs=68.9
Q ss_pred EEEeccCccccCHHHHHHHHHHHHhCCCcEEEEEecCCCCCccccccccCCCCCCchhHHHHhcCCeEEEEeccHHHhhh
Q 045570 274 VFLCFGSSGSFDVAQVKEIAIGLERSGYNFLWSLRVSSPKDEVSAHRYVTNNGVFPEGFLERIKGRGMIWGWVPQVEILA 353 (468)
Q Consensus 274 v~vs~GS~~~~~~~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~v~~~vpq~~iL~ 353 (468)
|-|-.|| ..+.+..+++...|+..+..+=..+-+. +..|+.+.+... ..+- .
T Consensus 3 V~Ii~gs--~SD~~~~~~a~~~L~~~gi~~~~~V~sa---------------HR~p~~l~~~~~----------~~~~-~ 54 (150)
T PF00731_consen 3 VAIIMGS--TSDLPIAEEAAKTLEEFGIPYEVRVASA---------------HRTPERLLEFVK----------EYEA-R 54 (150)
T ss_dssp EEEEESS--GGGHHHHHHHHHHHHHTT-EEEEEE--T---------------TTSHHHHHHHHH----------HTTT-T
T ss_pred EEEEeCC--HHHHHHHHHHHHHHHHcCCCEEEEEEec---------------cCCHHHHHHHHH----------Hhcc-C
Confidence 4455666 3355667788888888886665554443 334544322110 0000 1
Q ss_pred ccccceeeeccCch----hHHHHHhcCCcEEeccCccccchhHH----HHHhhhceEEEeeeccccCCcccChhHHHHHH
Q 045570 354 HKAIGGFVSHCGWN----SILESLWYGVPIATWPIYAEQQLNAF----RMVKELGLALDLRLDYRVGSDLVMAGDIESAV 425 (468)
Q Consensus 354 ~~~~~~~i~HgG~~----s~~eal~~GvP~v~~P~~~DQ~~na~----~~~~~~G~G~~~~~~~~~~~~~~~~~~l~~av 425 (468)
.+++ ||.=.|.. ++..++ .-.|+|.+|....+..... .+.---|+++..-.- +...++.-+...|
T Consensus 55 ~~~v--iIa~AG~~a~Lpgvva~~-t~~PVIgvP~~~~~~~g~d~l~S~vqMp~g~pvatv~i----~~~~nAA~~A~~I 127 (150)
T PF00731_consen 55 GADV--IIAVAGMSAALPGVVASL-TTLPVIGVPVSSGYLGGLDSLLSIVQMPSGVPVATVGI----NNGFNAALLAARI 127 (150)
T ss_dssp TESE--EEEEEESS--HHHHHHHH-SSS-EEEEEE-STTTTTHHHHHHHHT--TTS--EE-SS----THHHHHHHHHHHH
T ss_pred CCEE--EEEECCCcccchhhheec-cCCCEEEeecCcccccCcccHHHHHhccCCCCceEEEc----cCchHHHHHHHHH
Confidence 2344 88877754 444443 3789999999877553222 222112555433210 1133344444333
Q ss_pred HHHhcCcHHHHHHHHHHHHHHHHh
Q 045570 426 RCLMDGENKIRKKVKEMAEISRKS 449 (468)
Q Consensus 426 ~~vl~~~~~~~~~a~~l~~~~~~~ 449 (468)
-. +. |++++++.+..++..++.
T Consensus 128 La-~~-d~~l~~kl~~~~~~~~~~ 149 (150)
T PF00731_consen 128 LA-LK-DPELREKLRAYREKMKEK 149 (150)
T ss_dssp HH-TT--HHHHHHHHHHHHHHHHH
T ss_pred Hh-cC-CHHHHHHHHHHHHHHHcc
Confidence 22 23 689999999888887763
No 202
>COG2159 Predicted metal-dependent hydrolase of the TIM-barrel fold [General function prediction only]
Probab=41.71 E-value=1.6e+02 Score=27.68 Aligned_cols=111 Identities=14% Similarity=-0.006 Sum_probs=59.0
Q ss_pred eEEeccccCCCCCCCCCCChhcHhHHHHhhhcCCCCcEEEEeccCccccCHHHHHHHHHHHHhCCCcEEEEEecCCCCCc
Q 045570 236 LYTAGPVLHLKSQPNPDLDEAQYQKIFQWLDDLAESSVVFLCFGSSGSFDVAQVKEIAIGLERSGYNFLWSLRVSSPKDE 315 (468)
Q Consensus 236 v~~vGpl~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vv~vs~GS~~~~~~~~~~~~~~al~~~~~~~iw~~~~~~~~~~ 315 (468)
-.++|....++... .....++.....+.+-.++-.-........+...+..+.+++++.|..+++-+|......
T Consensus 98 drf~~~~~v~p~~~-----~~a~~E~er~v~~~gf~g~~l~p~~~~~~~~~~~~~pi~~~a~~~gvpv~ihtG~~~~~~- 171 (293)
T COG2159 98 DRFVGFARVDPRDP-----EAAAEELERRVRELGFVGVKLHPVAQGFYPDDPRLYPIYEAAEELGVPVVIHTGAGPGGA- 171 (293)
T ss_pred cceeeeeeeCCCch-----HHHHHHHHHHHHhcCceEEEecccccCCCCCChHHHHHHHHHHHcCCCEEEEeCCCCCCc-
Confidence 45666544433321 223445666655433222332233333344555688999999999999999777542111
Q ss_pred cccccccCCCCCCchhHHHHhcCCeEEEEeccHHHhhhccccceeeeccC--chhHHHH
Q 045570 316 VSAHRYVTNNGVFPEGFLERIKGRGMIWGWVPQVEILAHKAIGGFVSHCG--WNSILES 372 (468)
Q Consensus 316 ~~~~~~~~~~~~lp~~~~~~~~~~~~v~~~vpq~~iL~~~~~~~~i~HgG--~~s~~ea 372 (468)
.+... ...++.=....-.+|+++.++.|+| ..=..|+
T Consensus 172 -----------~~~~~---------~~~p~~~~~va~~fP~l~IVl~H~G~~~p~~~~a 210 (293)
T COG2159 172 -----------GLEKG---------HSDPLYLDDVARKFPELKIVLGHMGEDYPWELEA 210 (293)
T ss_pred -----------ccccC---------CCCchHHHHHHHHCCCCcEEEEecCCCCchhHHH
Confidence 00000 0001111333456789999999999 4444444
No 203
>PRK10422 lipopolysaccharide core biosynthesis protein; Provisional
Probab=41.00 E-value=3.4e+02 Score=26.16 Aligned_cols=40 Identities=10% Similarity=0.128 Sum_probs=35.4
Q ss_pred CcEEEEEcCCCCCChHHHHHHHHHHHhCCCCeEEEEEecC
Q 045570 3 KAELIFVPSPGIGHLVSTLEFAKHLTDRDDRISVTILSMK 42 (468)
Q Consensus 3 k~~i~~~~~p~~GH~~P~l~La~~L~~rGH~~~Vt~~~~~ 42 (468)
..||+++-....|++.=..++.++|+++--+.+|++++.+
T Consensus 5 ~~~ILii~~~~iGD~vl~~P~l~~Lk~~~P~a~I~~l~~~ 44 (352)
T PRK10422 5 FRRILIIKMRFHGDMLLTTPVISSLKKNYPDAKIDVLLYQ 44 (352)
T ss_pred CceEEEEEecccCceeeHHHHHHHHHHHCCCCeEEEEecc
Confidence 3579999999999999999999999998555679999986
No 204
>PRK07414 cob(I)yrinic acid a,c-diamide adenosyltransferase; Validated
Probab=40.44 E-value=2.4e+02 Score=24.33 Aligned_cols=36 Identities=17% Similarity=0.120 Sum_probs=27.1
Q ss_pred CcEEEEEcCCCCCChHHHHHHHHHHHhCCCCeEEEEEe
Q 045570 3 KAELIFVPSPGIGHLVSTLEFAKHLTDRDDRISVTILS 40 (468)
Q Consensus 3 k~~i~~~~~p~~GH~~P~l~La~~L~~rGH~~~Vt~~~ 40 (468)
|--|-+++..+.|-.+..+.+| |++.||+.+|.++-
T Consensus 21 ~Gli~VYtGdGKGKTTAAlGla--lRAaG~G~rV~iiQ 56 (178)
T PRK07414 21 EGLVQVFTSSQRNFFTSVMAQA--LRIAGQGTPVLIVQ 56 (178)
T ss_pred CCEEEEEeCCCCCchHHHHHHH--HHHhcCCCEEEEEE
Confidence 4568899999999998877666 77777776665543
No 205
>cd07038 TPP_PYR_PDC_IPDC_like Pyrimidine (PYR) binding domain of pyruvate decarboxylase (PDC), indolepyruvate decarboxylase (IPDC) and related proteins. Thiamine pyrophosphate (TPP family), pyrimidine (PYR) binding domain of pyruvate decarboxylase (PDC) and indolepyruvate decarboxylase (IPDC) subfamily. The PYR domain is found in many key metabolic enzymes which use TPP (also known as thiamine diphosphate) as a cofactor. TPP binds in the cleft formed by a PYR domain and a PP domain. The PYR domain, binds the aminopyrimidine ring of TPP, the PP domain binds the diphosphate residue. The PYR and PP domains have a common fold, but do not share strong sequence conservation. The PP domain is not included in this sub-family. Most TPP-dependent enzymes have the PYR and PP domains on the same subunit although these domains can be alternatively arranged in the primary structure. TPP-dependent enzymes are multisubunit proteins, the smallest catalytic unit being a dimer-of-active sites, for many
Probab=40.23 E-value=60 Score=27.46 Aligned_cols=28 Identities=21% Similarity=0.264 Sum_probs=21.6
Q ss_pred cceeeeccCch------hHHHHHhcCCcEEeccC
Q 045570 357 IGGFVSHCGWN------SILESLWYGVPIATWPI 384 (468)
Q Consensus 357 ~~~~i~HgG~~------s~~eal~~GvP~v~~P~ 384 (468)
.+++++|.|-| ++.+|...++|+|++.-
T Consensus 60 ~gv~~~t~GpG~~n~~~gl~~A~~~~~Pvl~i~g 93 (162)
T cd07038 60 LGALVTTYGVGELSALNGIAGAYAEHVPVVHIVG 93 (162)
T ss_pred CEEEEEcCCccHHHHHHHHHHHHHcCCCEEEEec
Confidence 34477777744 67889999999999953
No 206
>KOG0853 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis]
Probab=39.43 E-value=28 Score=35.20 Aligned_cols=67 Identities=13% Similarity=0.096 Sum_probs=41.1
Q ss_pred eccCchhHHHHHhcCCcEEeccCccccchhHHHHHhhhceEEEeeeccccCCcccChhHHHHHHHHHhcCcHHHHHHHHH
Q 045570 362 SHCGWNSILESLWYGVPIATWPIYAEQQLNAFRMVKELGLALDLRLDYRVGSDLVMAGDIESAVRCLMDGENKIRKKVKE 441 (468)
Q Consensus 362 ~HgG~~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~G~G~~~~~~~~~~~~~~~~~~l~~av~~vl~~~~~~~~~a~~ 441 (468)
-|-|. ++.||+++|.|+++.=-+ --+..+ ...--|..++ .+.-....+.+++.++.+ |++++.+..+
T Consensus 376 E~FGi-v~IEAMa~glPvvAt~~G----GP~EiV-~~~~tG~l~d------p~~e~~~~~a~~~~kl~~-~p~l~~~~~~ 442 (495)
T KOG0853|consen 376 EHFGI-VPIEAMACGLPVVATNNG----GPAEIV-VHGVTGLLID------PGQEAVAELADALLKLRR-DPELWARMGK 442 (495)
T ss_pred CCccc-eeHHHHhcCCCEEEecCC----CceEEE-EcCCcceeeC------CchHHHHHHHHHHHHHhc-CHHHHHHHHH
Confidence 34444 789999999999987322 222222 2213455554 112223379999999998 7887666543
No 207
>PF05693 Glycogen_syn: Glycogen synthase; InterPro: IPR008631 This family consists of the eukaryotic glycogen synthase proteins GYS1, GYS2 and GYS3. Glycogen synthase (GS) is the enzyme responsible for the synthesis of -1,4-linked glucose chains in glycogen. It is the rate limiting enzyme in the synthesis of the polysaccharide, and its activity is highly regulated through phosphorylation at multiple sites and also by allosteric effectors, mainly glucose 6-phosphate (G6P) [].; GO: 0004373 glycogen (starch) synthase activity, 0005978 glycogen biosynthetic process; PDB: 3NB0_C 3RT1_C 3RSZ_D 3O3C_B 3NAZ_B 3NCH_D.
Probab=39.40 E-value=54 Score=34.03 Aligned_cols=100 Identities=14% Similarity=0.132 Sum_probs=53.3
Q ss_pred HhcCCeEEE---Ee---------ccHHHhhhccccceeeec---cCchhHHHHHhcCCcEEeccCc-----cccchhHHH
Q 045570 335 RIKGRGMIW---GW---------VPQVEILAHKAIGGFVSH---CGWNSILESLWYGVPIATWPIY-----AEQQLNAFR 394 (468)
Q Consensus 335 ~~~~~~~v~---~~---------vpq~~iL~~~~~~~~i~H---gG~~s~~eal~~GvP~v~~P~~-----~DQ~~na~~ 394 (468)
...++|+|+ .| +++.+++.-++++.|-+= =| -|-+||..+|||.|.-=+. ..+... ..
T Consensus 438 ~~~drVKVIF~P~yL~~~dgif~l~Y~dfv~GcdLgvFPSYYEPWG-YTPlE~~a~gVPsITTnLsGFG~~~~~~~~-~~ 515 (633)
T PF05693_consen 438 NPEDRVKVIFHPEYLSGTDGIFNLDYYDFVRGCDLGVFPSYYEPWG-YTPLECTAFGVPSITTNLSGFGCWMQEHIE-DP 515 (633)
T ss_dssp -TT-SEEEEE--S---TTSSSS-S-HHHHHHHSSEEEE--SSBSS--HHHHHHHHTT--EEEETTBHHHHHHHTTS--HH
T ss_pred CCCCceEEEEeeccccCCCCCCCCCHHHHhccCceeeecccccccc-CChHHHhhcCCceeeccchhHHHHHHHhhc-cC
Confidence 345677765 33 378888888888666651 12 3889999999999985542 222222 11
Q ss_pred HHhhhceEEEeeeccccCCcccChhHHHHHHHHHhc----Cc----HHHHHHHHHHHHH
Q 045570 395 MVKELGLALDLRLDYRVGSDLVMAGDIESAVRCLMD----GE----NKIRKKVKEMAEI 445 (468)
Q Consensus 395 ~~~~~G~G~~~~~~~~~~~~~~~~~~l~~av~~vl~----~~----~~~~~~a~~l~~~ 445 (468)
... |+-+.-++ .-+.++..+.+.+.|. -+ ...|.++++|++.
T Consensus 516 -~~~-GV~VvdR~-------~~n~~e~v~~la~~l~~f~~~~~rqri~~Rn~ae~LS~~ 565 (633)
T PF05693_consen 516 -EEY-GVYVVDRR-------DKNYDESVNQLADFLYKFCQLSRRQRIIQRNRAERLSDL 565 (633)
T ss_dssp -GGG-TEEEE-SS-------SS-HHHHHHHHHHHHHHHHT--HHHHHHHHHHHHHHGGG
T ss_pred -cCC-cEEEEeCC-------CCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHh
Confidence 233 77664332 5566666666666653 11 1566666666654
No 208
>COG1663 LpxK Tetraacyldisaccharide-1-P 4'-kinase [Cell envelope biogenesis, outer membrane]
Probab=37.55 E-value=1e+02 Score=29.55 Aligned_cols=34 Identities=21% Similarity=0.219 Sum_probs=29.1
Q ss_pred EEEcCCCCCChHHHHHHHHHHHhCCCCeEEEEEecC
Q 045570 7 IFVPSPGIGHLVSTLEFAKHLTDRDDRISVTILSMK 42 (468)
Q Consensus 7 ~~~~~p~~GH~~P~l~La~~L~~rGH~~~Vt~~~~~ 42 (468)
.=++.++.|-.--.+.||++|.+|| +.+.+++-.
T Consensus 53 GNltvGGtGKTP~vi~la~~l~~rG--~~~gvvSRG 86 (336)
T COG1663 53 GNLTVGGTGKTPVVIWLAEALQARG--VRVGVVSRG 86 (336)
T ss_pred ccEEECCCCcCHHHHHHHHHHHhcC--CeeEEEecC
Confidence 3468899999999999999999999 558888854
No 209
>PRK13982 bifunctional SbtC-like/phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Provisional
Probab=37.20 E-value=49 Score=33.50 Aligned_cols=39 Identities=13% Similarity=0.171 Sum_probs=33.7
Q ss_pred CCcEEEEEcCCCCCChHHH------------HHHHHHHHhCCCCeEEEEEecC
Q 045570 2 KKAELIFVPSPGIGHLVST------------LEFAKHLTDRDDRISVTILSMK 42 (468)
Q Consensus 2 ~k~~i~~~~~p~~GH~~P~------------l~La~~L~~rGH~~~Vt~~~~~ 42 (468)
+.+||++...|++=.+.|. .+||+++..+|++ ||+++++
T Consensus 255 ~gkkvLITaGpT~E~IDpVR~ItN~SSGkmG~alA~aa~~~GA~--VtlI~Gp 305 (475)
T PRK13982 255 AGRRVLITAGPTHEPIDPVRYIANRSSGKQGFAIAAAAAAAGAE--VTLISGP 305 (475)
T ss_pred CCCEEEEecCCccccCCcceeeCCCCchHHHHHHHHHHHHCCCc--EEEEeCC
Confidence 4458999999999888886 6899999999988 9999976
No 210
>cd01974 Nitrogenase_MoFe_beta Nitrogenase_MoFe_beta: Nitrogenase MoFe protein, beta subunit. The nitrogenase enzyme catalyzes the ATP-dependent reduction of dinitrogen to ammonia. The Molybdenum (Mo-) nitrogenase is the most widespread and best characterized of these systems. Mo-nitrogenase consists of the MoFe protein (component 1) and the Fe protein (component 2). MoFe is an alpha2beta2 tetramer. This group contains the beta subunit of the MoFe protein. Each alphabeta pair of MoFe contains one P-cluster (at the alphabeta interface) and, one molecule of iron molybdenum cofactor (FeMoco) contained within the alpha subunit. The Fe protein contains a single [4Fe-4S] cluster. Electrons are transferred from the [4Fe-4S] cluster of the Fe protein to the P-cluster of the MoFe and in turn to FeMoCo, the site of substrate reduction.
Probab=37.09 E-value=2.2e+02 Score=28.63 Aligned_cols=26 Identities=23% Similarity=0.229 Sum_probs=21.0
Q ss_pred CccEEEEcCCcchHHHHHHHcCCCeEEEe
Q 045570 112 QVTGLVLDFFCVSMVDIAKELSLPSYMFL 140 (468)
Q Consensus 112 ~~D~vv~D~~~~~~~~~A~~lgiP~v~~~ 140 (468)
+||++|.... ...+|+++|+|++.+.
T Consensus 377 ~pDliiG~s~---~~~~a~~~gip~v~~~ 402 (435)
T cd01974 377 PVDLLIGNTY---GKYIARDTDIPLVRFG 402 (435)
T ss_pred CCCEEEECcc---HHHHHHHhCCCEEEee
Confidence 7999998773 5778999999987543
No 211
>PLN02859 glutamine-tRNA ligase
Probab=36.31 E-value=57 Score=35.09 Aligned_cols=63 Identities=17% Similarity=0.214 Sum_probs=40.0
Q ss_pred HHHhhhceEEEeeeccccCCcccChhHHHHHHHHHhcCc------HHHHHHHHHHHHHHHHh--hhcCCChHHHHHHHHH
Q 045570 394 RMVKELGLALDLRLDYRVGSDLVMAGDIESAVRCLMDGE------NKIRKKVKEMAEISRKS--LMEGGSSFNSIGQFIS 465 (468)
Q Consensus 394 ~~~~~~G~G~~~~~~~~~~~~~~~~~~l~~av~~vl~~~------~~~~~~a~~l~~~~~~~--~~~gg~~~~~~~~~~~ 465 (468)
..++.-|+|+.+ |+|++.++|.++++.+ ..|+.|...+-..+++. +.++..-...|++.+-
T Consensus 108 ~Fek~CGVGV~V-----------T~EqI~~~V~~~i~~~k~~il~~RY~~n~g~ll~~~r~~Lkwad~~~~k~~id~~~~ 176 (788)
T PLN02859 108 KFEEACGVGVVV-----------SPEDIEAAVNEVFEENKEKILEQRYRTNVGDLLGQVRKRLPWADPKIVKKLIDKKLY 176 (788)
T ss_pred HHHHhCCCCEEE-----------CHHHHHHHHHHHHHhhHHHHHHhcccccHHHHHHHHHhhCCCCCHHHHHHHHHHHHH
Confidence 445445999754 8999999999999743 25777666666666654 2244444445554444
Q ss_pred hh
Q 045570 466 LN 467 (468)
Q Consensus 466 ~~ 467 (468)
+|
T Consensus 177 ~l 178 (788)
T PLN02859 177 EL 178 (788)
T ss_pred Hh
Confidence 33
No 212
>PRK05595 replicative DNA helicase; Provisional
Probab=36.30 E-value=1.4e+02 Score=30.14 Aligned_cols=36 Identities=19% Similarity=0.394 Sum_probs=30.2
Q ss_pred EEEEEcCCCCCChHHHHHHHHHHH-hCCCCeEEEEEecC
Q 045570 5 ELIFVPSPGIGHLVSTLEFAKHLT-DRDDRISVTILSMK 42 (468)
Q Consensus 5 ~i~~~~~p~~GH~~P~l~La~~L~-~rGH~~~Vt~~~~~ 42 (468)
-+++...|+.|-..=.+.+|..++ +.|+. |.+++.+
T Consensus 203 liviaarpg~GKT~~al~ia~~~a~~~g~~--vl~fSlE 239 (444)
T PRK05595 203 MILIAARPSMGKTTFALNIAEYAALREGKS--VAIFSLE 239 (444)
T ss_pred EEEEEecCCCChHHHHHHHHHHHHHHcCCc--EEEEecC
Confidence 367788899999999999998876 56877 8888876
No 213
>PF06506 PrpR_N: Propionate catabolism activator; InterPro: IPR010524 Two-component signal transduction systems enable bacteria to sense, respond, and adapt to a wide range of environments, stressors, and growth conditions []. Some bacteria can contain up to as many as 200 two-component systems that need tight regulation to prevent unwanted cross-talk []. These pathways have been adapted to response to a wide variety of stimuli, including nutrients, cellular redox state, changes in osmolarity, quorum signals, antibiotics, and more []. Two-component systems are comprised of a sensor histidine kinase (HK) and its cognate response regulator (RR) []. The HK catalyses its own auto-phosphorylation followed by the transfer of the phosphoryl group to the receiver domain on RR; phosphorylation of the RR usually activates an attached output domain, which can then effect changes in cellular physiology, often by regulating gene expression. Some HK are bifunctional, catalysing both the phosphorylation and dephosphorylation of their cognate RR. The input stimuli can regulate either the kinase or phosphatase activity of the bifunctional HK. A variant of the two-component system is the phospho-relay system. Here a hybrid HK auto-phosphorylates and then transfers the phosphoryl group to an internal receiver domain, rather than to a separate RR protein. The phosphoryl group is then shuttled to histidine phosphotransferase (HPT) and subsequently to a terminal RR, which can evoke the desired response [, ]. This entry represents a domain found at the N terminus of several sigma54- dependent transcriptional activators including PrpR, which activates catabolism of propionate. In Salmonella enterica subsp. enterica serovar Typhimurium, PrpR acts as a sensor of 2-methylcitrate (2-MC), an intermediate of the 2-methylcitric acid cycle used by this bacterium to convert propionate to pyruvate []. ; GO: 0000156 two-component response regulator activity, 0003677 DNA binding, 0005524 ATP binding, 0000160 two-component signal transduction system (phosphorelay); PDB: 2Q5C_A 2PJU_A.
Probab=35.66 E-value=58 Score=27.95 Aligned_cols=31 Identities=19% Similarity=0.335 Sum_probs=20.6
Q ss_pred cccceeeeccCchhHHHHHhcCCcEEeccCcc
Q 045570 355 KAIGGFVSHCGWNSILESLWYGVPIATWPIYA 386 (468)
Q Consensus 355 ~~~~~~i~HgG~~s~~eal~~GvP~v~~P~~~ 386 (468)
..+..+|++||...+..... ++|+|-+|..+
T Consensus 33 ~g~dViIsRG~ta~~lr~~~-~iPVV~I~~s~ 63 (176)
T PF06506_consen 33 EGADVIISRGGTAELLRKHV-SIPVVEIPISG 63 (176)
T ss_dssp TT-SEEEEEHHHHHHHHCC--SS-EEEE---H
T ss_pred cCCeEEEECCHHHHHHHHhC-CCCEEEECCCH
Confidence 33444999999998888876 99999999853
No 214
>PRK06321 replicative DNA helicase; Provisional
Probab=35.54 E-value=1.5e+02 Score=30.19 Aligned_cols=36 Identities=22% Similarity=0.359 Sum_probs=30.1
Q ss_pred EEEEEcCCCCCChHHHHHHHHHHHh-CCCCeEEEEEecC
Q 045570 5 ELIFVPSPGIGHLVSTLEFAKHLTD-RDDRISVTILSMK 42 (468)
Q Consensus 5 ~i~~~~~p~~GH~~P~l~La~~L~~-rGH~~~Vt~~~~~ 42 (468)
-|++..-|+.|-..-.+.+|...+. .|.. |.|++-+
T Consensus 228 LiiiaarPgmGKTafal~ia~~~a~~~g~~--v~~fSLE 264 (472)
T PRK06321 228 LMILAARPAMGKTALALNIAENFCFQNRLP--VGIFSLE 264 (472)
T ss_pred EEEEEeCCCCChHHHHHHHHHHHHHhcCCe--EEEEecc
Confidence 3678889999999999999999874 5766 8888876
No 215
>cd07039 TPP_PYR_POX Pyrimidine (PYR) binding domain of POX. Thiamine pyrophosphate (TPP family), pyrimidine (PYR) binding domain of pyruvate oxidase (POX) subfamily. The PYR domain is found in many key metabolic enzymes which use TPP (also known as thiamine diphosphate) as a cofactor. TPP binds in the cleft formed by a PYR domain and a PP domain. The PYR domain, binds the aminopyrimidine ring of TPP, the PP domain binds the diphosphate residue. The PYR and PP domains have a common fold, but do not share strong sequence conservation. The PP domain is not included in this sub-family. Most TPP-dependent enzymes have the PYR and PP domains on the same subunit although these domains can be alternatively arranged in the primary structure. TPP-dependent enzymes are multisubunit proteins, the smallest catalytic unit being a dimer-of-active sites. Lactobacillus plantarum POX is a homotetramer (dimer-of-homodimers), having two active sites per homodimer lying between PYR and PP domains of differ
Probab=35.28 E-value=1.7e+02 Score=24.73 Aligned_cols=26 Identities=12% Similarity=0.192 Sum_probs=21.7
Q ss_pred ceeeeccCch------hHHHHHhcCCcEEecc
Q 045570 358 GGFVSHCGWN------SILESLWYGVPIATWP 383 (468)
Q Consensus 358 ~~~i~HgG~~------s~~eal~~GvP~v~~P 383 (468)
+++++|+|-| ++.+|...++|+|++.
T Consensus 65 ~v~~~t~GpG~~n~~~~l~~A~~~~~Pvl~I~ 96 (164)
T cd07039 65 GVCLGSSGPGAIHLLNGLYDAKRDRAPVLAIA 96 (164)
T ss_pred EEEEECCCCcHHHHHHHHHHHHhcCCCEEEEe
Confidence 3488888854 7889999999999995
No 216
>COG0297 GlgA Glycogen synthase [Carbohydrate transport and metabolism]
Probab=35.18 E-value=1.5e+02 Score=30.17 Aligned_cols=114 Identities=14% Similarity=0.107 Sum_probs=66.2
Q ss_pred HhcCCeEEEEecc-HHH--hhhccccceeee-----ccCchhHHHHHhcCCcEEeccCcc--ccchhHHH--HHhhhceE
Q 045570 335 RIKGRGMIWGWVP-QVE--ILAHKAIGGFVS-----HCGWNSILESLWYGVPIATWPIYA--EQQLNAFR--MVKELGLA 402 (468)
Q Consensus 335 ~~~~~~~v~~~vp-q~~--iL~~~~~~~~i~-----HgG~~s~~eal~~GvP~v~~P~~~--DQ~~na~~--~~~~~G~G 402 (468)
+.++++.++-|.. ... +++-+++ |+- -||. |=++++++|.+-|+.+..+ |--..... .... |.|
T Consensus 346 ~~~~~~~~~i~~~~~la~~i~agaD~--~lmPSrfEPcGL-~ql~amryGtvpIv~~tGGLadTV~~~~~~~~~~~-gtG 421 (487)
T COG0297 346 RHPGRVLVVIGYDEPLAHLIYAGADV--ILMPSRFEPCGL-TQLYAMRYGTLPIVRETGGLADTVVDRNEWLIQGV-GTG 421 (487)
T ss_pred hcCceEEEEeeecHHHHHHHHhcCCE--EEeCCcCcCCcH-HHHHHHHcCCcceEcccCCccceecCccchhccCc-eeE
Confidence 4456666664443 333 5555555 543 4676 4567899999988888763 32222111 2334 777
Q ss_pred EEeeeccccCCcccChhHHHHHHHHHhcCcHHHHHHHHHHHHHHHHhhhcCCChHHHHHHH
Q 045570 403 LDLRLDYRVGSDLVMAGDIESAVRCLMDGENKIRKKVKEMAEISRKSLMEGGSSFNSIGQF 463 (468)
Q Consensus 403 ~~~~~~~~~~~~~~~~~~l~~av~~vl~~~~~~~~~a~~l~~~~~~~~~~gg~~~~~~~~~ 463 (468)
..+. ..+++.+..++++.+. -|+..-..++...+.++...-|-+....+.
T Consensus 422 f~f~--------~~~~~~l~~al~rA~~---~y~~~~~~w~~~~~~~m~~d~sw~~sa~~y 471 (487)
T COG0297 422 FLFL--------QTNPDHLANALRRALV---LYRAPPLLWRKVQPNAMGADFSWDLSAKEY 471 (487)
T ss_pred EEEe--------cCCHHHHHHHHHHHHH---HhhCCHHHHHHHHHhhcccccCchhHHHHH
Confidence 7776 4499999999998875 344444435555555544233333344433
No 217
>PRK10964 ADP-heptose:LPS heptosyl transferase I; Provisional
Probab=35.14 E-value=1.8e+02 Score=27.66 Aligned_cols=38 Identities=13% Similarity=0.205 Sum_probs=33.4
Q ss_pred EEEEEcCCCCCChHHHHHHHHHHHhCCCCeEEEEEecC
Q 045570 5 ELIFVPSPGIGHLVSTLEFAKHLTDRDDRISVTILSMK 42 (468)
Q Consensus 5 ~i~~~~~p~~GH~~P~l~La~~L~~rGH~~~Vt~~~~~ 42 (468)
||+++-....|++.=..++.+.|++.=.+.+|++++.+
T Consensus 2 ~ILii~~~~iGD~v~~~p~~~~lk~~~P~a~I~~l~~~ 39 (322)
T PRK10964 2 RVLIVKTSSMGDVLHTLPALTDAQQAIPGIQFDWVVEE 39 (322)
T ss_pred eEEEEeccchHHHHhHHHHHHHHHHhCCCCEEEEEECH
Confidence 69999999999999999999999997334669999976
No 218
>COG2987 HutU Urocanate hydratase [Amino acid transport and metabolism]
Probab=35.12 E-value=89 Score=30.97 Aligned_cols=40 Identities=18% Similarity=0.056 Sum_probs=26.4
Q ss_pred EEEEeccHHHhhhcccc--ceeeeccCchhHHHHHhcCCcEE
Q 045570 341 MIWGWVPQVEILAHKAI--GGFVSHCGWNSILESLWYGVPIA 380 (468)
Q Consensus 341 ~v~~~vpq~~iL~~~~~--~~~i~HgG~~s~~eal~~GvP~v 380 (468)
.+.+|.=+..+|..++- =.-+||||--++-.++..|.=+|
T Consensus 466 avsDwp~lnallntA~GatwvslHhGGGvgmG~s~h~G~viV 507 (561)
T COG2987 466 AVSDWPLLNALLNTASGATWVSLHHGGGVGMGFSQHAGMVIV 507 (561)
T ss_pred hhhhhHHHHHHhhhccCCcEEEEecCCcccccccccCceEEE
Confidence 45588778888865432 23689999877777766655444
No 219
>COG3340 PepE Peptidase E [Amino acid transport and metabolism]
Probab=35.10 E-value=3.3e+02 Score=24.32 Aligned_cols=48 Identities=19% Similarity=0.160 Sum_probs=35.7
Q ss_pred HhHHHHhhhcCCCCcEEEEeccCccccCHHHHHHHHHHHHhCCCcEEEE
Q 045570 258 YQKIFQWLDDLAESSVVFLCFGSSGSFDVAQVKEIAIGLERSGYNFLWS 306 (468)
Q Consensus 258 ~~~~~~~l~~~~~~~vv~vs~GS~~~~~~~~~~~~~~al~~~~~~~iw~ 306 (468)
.+.+.+|+... .+.+.||-+.|...-...-+++..++|+..|..+.-.
T Consensus 21 ~~~i~n~l~g~-~~~i~FIPtAs~~~~~~~Yv~k~~~~l~~lg~~v~~L 68 (224)
T COG3340 21 LPFIANFLQGK-RKTIAFIPTASVDSEDDFYVEKVRNALAKLGLEVSEL 68 (224)
T ss_pred hHHHHHHhcCC-CceEEEEecCccccchHHHHHHHHHHHHHcCCeeeee
Confidence 34555566543 3469999999988777777889999999999876543
No 220
>TIGR02398 gluc_glyc_Psyn glucosylglycerol-phosphate synthase. Glucosylglycerol-phosphate synthase catalyzes the key step in the biosynthesis of the osmolyte glucosylglycerol. It is known in several cyanobacteria and in Pseudomonas anguilliseptica. The enzyme is closely related to the alpha,alpha-trehalose-phosphate synthase, likewise involved in osmolyte biosynthesis, of E. coli and many other bacteria. A close homolog from Xanthomonas campestris is excluded from this model and scores between trusted and noise.
Probab=34.93 E-value=3.2e+02 Score=27.98 Aligned_cols=105 Identities=13% Similarity=0.056 Sum_probs=63.1
Q ss_pred eEEEEeccHHH---hhhccccceeee--ccCchhH-HHHHhcCC----cEEeccCccccchhHHHHHhhhceEEEeeecc
Q 045570 340 GMIWGWVPQVE---ILAHKAIGGFVS--HCGWNSI-LESLWYGV----PIATWPIYAEQQLNAFRMVKELGLALDLRLDY 409 (468)
Q Consensus 340 ~~v~~~vpq~~---iL~~~~~~~~i~--HgG~~s~-~eal~~Gv----P~v~~P~~~DQ~~na~~~~~~~G~G~~~~~~~ 409 (468)
.++.+.+|+.+ ++.-+++ ++|| .-|+|-| .|.++++. |+|.==+.+ |. +.+.-++.++
T Consensus 364 ~~~~~~v~~~el~alYr~ADV-~lvT~lrDGmNLVa~Eyva~~~~~~GvLILSefaG-----aa---~~l~~AllVN--- 431 (487)
T TIGR02398 364 QFFTRSLPYEEVSAWFAMADV-MWITPLRDGLNLVAKEYVAAQGLLDGVLVLSEFAG-----AA---VELKGALLTN--- 431 (487)
T ss_pred EEEcCCCCHHHHHHHHHhCCE-EEECccccccCcchhhHHhhhcCCCCCEEEecccc-----ch---hhcCCCEEEC---
Confidence 34557788777 4556776 2333 3488855 49999877 444432221 11 2234466666
Q ss_pred ccCCcccChhHHHHHHHHHhcCcH--HHHHHHHHHHHHHHHhhhcCCChHHHHHHHHHhh
Q 045570 410 RVGSDLVMAGDIESAVRCLMDGEN--KIRKKVKEMAEISRKSLMEGGSSFNSIGQFISLN 467 (468)
Q Consensus 410 ~~~~~~~~~~~l~~av~~vl~~~~--~~~~~a~~l~~~~~~~~~~gg~~~~~~~~~~~~~ 467 (468)
..+.++++++|.++|+ .+ +-++|.+++.+.+++. ....=.++|++.|
T Consensus 432 -----P~d~~~~A~ai~~AL~-m~~~Er~~R~~~l~~~v~~~-----d~~~W~~~fl~~l 480 (487)
T TIGR02398 432 -----PYDPVRMDETIYVALA-MPKAEQQARMREMFDAVNYY-----DVQRWADEFLAAV 480 (487)
T ss_pred -----CCCHHHHHHHHHHHHc-CCHHHHHHHHHHHHHHHhhC-----CHHHHHHHHHHHh
Confidence 6689999999999998 43 4455555555555542 4444566666654
No 221
>TIGR02990 ectoine_eutA ectoine utilization protein EutA. Members of this protein family are EutA, a predicted arylmalonate decarboxylase found in a conserved ectoine utilization operon of species that include Sinorhizobium meliloti 1021 (where it is known to be induced by ectoine), Mesorhizobium loti and Silicibacter pomeroyi. It is missing from two other species with the other ectoine transport and utilization genes: Pseudomonas putida and Agrobacterium tumefaciens.
Probab=34.51 E-value=1.2e+02 Score=27.67 Aligned_cols=101 Identities=8% Similarity=0.047 Sum_probs=51.8
Q ss_pred hHHHHHHHHHHHhCCCCeEEEEEecCC-CCChhhhhhhcccCCCCCCeEEEeCCC-CCCCCCCCcCCChHHHHHHHHHhh
Q 045570 17 LVSTLEFAKHLTDRDDRISVTILSMKL-AVAPWVDAYTKSLTDSQPRICVIDLPP-VDPPLPDVLKKSPEYFISLVVESH 94 (468)
Q Consensus 17 ~~P~l~La~~L~~rGH~~~Vt~~~~~~-~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 94 (468)
++|..++..+|++.|-+ +|.++||-. ..+.....+.+ ..|++...... +.....+ +.+..
T Consensus 105 tt~~~A~~~AL~alg~~-RIalvTPY~~~v~~~~~~~l~-----~~G~eV~~~~~~~~~~~~~------------ia~i~ 166 (239)
T TIGR02990 105 VTPSSAAVDGLAALGVR-RISLLTPYTPETSRPMAQYFA-----VRGFEIVNFTCLGLTDDRE------------MARIS 166 (239)
T ss_pred eCHHHHHHHHHHHcCCC-EEEEECCCcHHHHHHHHHHHH-----hCCcEEeeeeccCCCCCce------------eeecC
Confidence 57889999999998843 387888631 12222334443 23566655422 2111111 11111
Q ss_pred chhHHHHHHhhhccCCCCccEEEEcCCcchHHH----HHHHcCCCeEE
Q 045570 95 LPNVKNIVSSRSNSGSLQVTGLVLDFFCVSMVD----IAKELSLPSYM 138 (468)
Q Consensus 95 ~~~~~~~l~~~~~~~~~~~D~vv~D~~~~~~~~----~A~~lgiP~v~ 138 (468)
...+.+.+.+.. ..++|.|+.-.....+.. +-+.+|+|+++
T Consensus 167 p~~i~~~~~~~~---~~~aDAifisCTnLrt~~vi~~lE~~lGkPVls 211 (239)
T TIGR02990 167 PDCIVEAALAAF---DPDADALFLSCTALRAATCAQRIEQAIGKPVVT 211 (239)
T ss_pred HHHHHHHHHHhc---CCCCCEEEEeCCCchhHHHHHHHHHHHCCCEEE
Confidence 223333444432 247888875543333333 34567999875
No 222
>PRK01231 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=34.23 E-value=2.1e+02 Score=26.96 Aligned_cols=53 Identities=17% Similarity=0.154 Sum_probs=38.4
Q ss_pred ccccceeeeccCchhHHHHHhc----CCcEEeccCccccchhHHHHHhhhceEEEeeeccccCCcccChhHHHHHHHHHh
Q 045570 354 HKAIGGFVSHCGWNSILESLWY----GVPIATWPIYAEQQLNAFRMVKELGLALDLRLDYRVGSDLVMAGDIESAVRCLM 429 (468)
Q Consensus 354 ~~~~~~~i~HgG~~s~~eal~~----GvP~v~~P~~~DQ~~na~~~~~~~G~G~~~~~~~~~~~~~~~~~~l~~av~~vl 429 (468)
.+++ +|+=||-||++++++. ++|++.+... .+|.. . ..+.+++.++|.+++
T Consensus 62 ~~d~--vi~~GGDGt~l~~~~~~~~~~~Pvlgin~G--------------~lGFl-~--------~~~~~~~~~~l~~~~ 116 (295)
T PRK01231 62 VCDL--VIVVGGDGSLLGAARALARHNVPVLGINRG--------------RLGFL-T--------DIRPDELEFKLAEVL 116 (295)
T ss_pred CCCE--EEEEeCcHHHHHHHHHhcCCCCCEEEEeCC--------------ccccc-c--------cCCHHHHHHHHHHHH
Confidence 4666 9999999999999753 6788877541 22321 1 556788999999988
Q ss_pred cC
Q 045570 430 DG 431 (468)
Q Consensus 430 ~~ 431 (468)
++
T Consensus 117 ~g 118 (295)
T PRK01231 117 DG 118 (295)
T ss_pred cC
Confidence 74
No 223
>COG1797 CobB Cobyrinic acid a,c-diamide synthase [Coenzyme metabolism]
Probab=33.84 E-value=56 Score=32.40 Aligned_cols=33 Identities=24% Similarity=0.377 Sum_probs=25.5
Q ss_pred EEEE-cCCCCCChHHHHHHHHHHHhCCCCeEEEEEe
Q 045570 6 LIFV-PSPGIGHLVSTLEFAKHLTDRDDRISVTILS 40 (468)
Q Consensus 6 i~~~-~~p~~GH~~P~l~La~~L~~rGH~~~Vt~~~ 40 (468)
|+|. |..+.|-.+-.+.|.++|++||+. |.-+.
T Consensus 3 vvIAg~~SG~GKTTvT~glm~aL~~rg~~--VqpfK 36 (451)
T COG1797 3 VVIAGTSSGSGKTTVTLGLMRALRRRGLK--VQPFK 36 (451)
T ss_pred eEEecCCCCCcHHHHHHHHHHHHHhcCCc--ccccc
Confidence 4443 445889999999999999999987 65443
No 224
>PRK14092 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
Probab=33.84 E-value=82 Score=26.76 Aligned_cols=30 Identities=13% Similarity=0.267 Sum_probs=22.6
Q ss_pred CCcEEEEeccCccccCHHHHHHHHHHHHhC
Q 045570 270 ESSVVFLCFGSSGSFDVAQVKEIAIGLERS 299 (468)
Q Consensus 270 ~~~vv~vs~GS~~~~~~~~~~~~~~al~~~ 299 (468)
.+..+|+++||......+.+...++.|...
T Consensus 6 ~~~~v~i~LGSNlg~~~~~l~~A~~~L~~~ 35 (163)
T PRK14092 6 ASALAYVGLGANLGDAAATLRSVLAELAAA 35 (163)
T ss_pred cCCEEEEEecCchHhHHHHHHHHHHHHHhC
Confidence 445899999997765666677777877764
No 225
>cd00561 CobA_CobO_BtuR ATP:corrinoid adenosyltransferase BtuR/CobO/CobP. This family consists of the BtuR, CobO, CobP proteins all of which are Cob(I)alamin (vitamin B12) adenosyltransferase, which is involved in cobalamin (vitamin B12) biosynthesis. This enzyme is a homodimer, which catalyzes the adenosylation reaction: ATP + cob(I)alamin + H2O <= phosphate + diphosphate + adenosylcobalamin.
Probab=33.55 E-value=3e+02 Score=23.29 Aligned_cols=101 Identities=15% Similarity=-0.020 Sum_probs=55.9
Q ss_pred cEEEEEcCCCCCChHHHHHHHHHHHhCCCCeEEEE---EecCCCCChhhhhhhcccCCCCCCeEEEeCCCCCCCCCCCcC
Q 045570 4 AELIFVPSPGIGHLVSTLEFAKHLTDRDDRISVTI---LSMKLAVAPWVDAYTKSLTDSQPRICVIDLPPVDPPLPDVLK 80 (468)
Q Consensus 4 ~~i~~~~~p~~GH~~P~l~La~~L~~rGH~~~Vt~---~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 80 (468)
--|-+++.++.|-.+..+.+|.+.+.+|+. |.+ +.+.. .......++.. +++++........-..
T Consensus 3 G~i~vy~g~G~Gkt~~a~g~~~ra~~~g~~--v~~vQFlKg~~--~~gE~~~l~~l----~~v~~~~~g~~~~~~~---- 70 (159)
T cd00561 3 GLIQVYTGNGKGKTTAALGLALRALGHGYR--VGVVQFLKGGW--KYGELKALERL----PNIEIHRMGRGFFWTT---- 70 (159)
T ss_pred CEEEEECCCCCCHHHHHHHHHHHHHHCCCe--EEEEEEeCCCC--ccCHHHHHHhC----CCcEEEECCCCCccCC----
Confidence 358899999999999999999888888877 555 55421 11111223322 3677776654322111
Q ss_pred CChHHHHHHHHHhhchhHHHHHHhhhccCCCCccEEEEcCCcc
Q 045570 81 KSPEYFISLVVESHLPNVKNIVSSRSNSGSLQVTGLVLDFFCV 123 (468)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~D~vv~D~~~~ 123 (468)
.+...... .....++..-+.+ . ..++|+||-|-...
T Consensus 71 ~~~~~~~~----~a~~~~~~a~~~~-~--~~~~dLlVLDEi~~ 106 (159)
T cd00561 71 ENDEEDIA----AAAEGWAFAKEAI-A--SGEYDLVILDEINY 106 (159)
T ss_pred CChHHHHH----HHHHHHHHHHHHH-h--cCCCCEEEEechHh
Confidence 12221111 1122222222222 2 34899999999654
No 226
>PRK07313 phosphopantothenoylcysteine decarboxylase; Validated
Probab=33.46 E-value=41 Score=29.15 Aligned_cols=37 Identities=30% Similarity=0.433 Sum_probs=29.3
Q ss_pred CCCcEEEEEcCCCCCChHHHHHHHHHHHhCCCCeEEEEEecC
Q 045570 1 MKKAELIFVPSPGIGHLVSTLEFAKHLTDRDDRISVTILSMK 42 (468)
Q Consensus 1 m~k~~i~~~~~p~~GH~~P~l~La~~L~~rGH~~~Vt~~~~~ 42 (468)
||| |++.-.++-|=+. ...+.+.|.++|++ |.++.++
T Consensus 1 ~k~--Ill~vtGsiaa~~-~~~li~~L~~~g~~--V~vv~T~ 37 (182)
T PRK07313 1 MKN--ILLAVSGSIAAYK-AADLTSQLTKRGYQ--VTVLMTK 37 (182)
T ss_pred CCE--EEEEEeChHHHHH-HHHHHHHHHHCCCE--EEEEECh
Confidence 554 8888777776665 89999999999987 8777776
No 227
>cd02070 corrinoid_protein_B12-BD B12 binding domain of corrinoid proteins. A family of small methanogenic corrinoid proteins that bind methyl-Co(III) 5-hydroxybenzimidazolylcobamide as a cofactor. They play a role on the methanogenesis from trimethylamine, dimethylamine or monomethylamine, which is initiated by a series of corrinoid-dependent methyltransferases.
Probab=33.01 E-value=75 Score=27.99 Aligned_cols=38 Identities=18% Similarity=0.069 Sum_probs=33.5
Q ss_pred CcEEEEEcCCCCCChHHHHHHHHHHHhCCCCeEEEEEecC
Q 045570 3 KAELIFVPSPGIGHLVSTLEFAKHLTDRDDRISVTILSMK 42 (468)
Q Consensus 3 k~~i~~~~~p~~GH~~P~l~La~~L~~rGH~~~Vt~~~~~ 42 (468)
+.+|++.+.++-.|-....=++..|..+|++ |+.+...
T Consensus 82 ~~~vl~~~~~gd~H~lG~~~v~~~l~~~G~~--vi~lG~~ 119 (201)
T cd02070 82 KGKVVIGTVEGDIHDIGKNLVATMLEANGFE--VIDLGRD 119 (201)
T ss_pred CCeEEEEecCCccchHHHHHHHHHHHHCCCE--EEECCCC
Confidence 5689999999999999999999999999977 8777643
No 228
>TIGR00708 cobA cob(I)alamin adenosyltransferase. Alternate name: corrinoid adenosyltransferase.
Probab=32.92 E-value=3.2e+02 Score=23.48 Aligned_cols=39 Identities=10% Similarity=0.252 Sum_probs=30.4
Q ss_pred CcEEEEEcCCCCCChHHHHHHHHHHHhCCCCeE-EEEEec
Q 045570 3 KAELIFVPSPGIGHLVSTLEFAKHLTDRDDRIS-VTILSM 41 (468)
Q Consensus 3 k~~i~~~~~p~~GH~~P~l~La~~L~~rGH~~~-Vt~~~~ 41 (468)
+.-|.+++..+.|-.+-.+.+|-+.+.+|+.+. |.|+.+
T Consensus 5 ~Gli~v~~g~GkGKtt~a~g~a~ra~~~g~~v~ivQFlKg 44 (173)
T TIGR00708 5 RGIIIVHTGNGKGKTTAAFGMALRALGHGKKVGVIQFIKG 44 (173)
T ss_pred ccEEEEECCCCCChHHHHHHHHHHHHHCCCeEEEEEEecC
Confidence 346889999999999999999988888887722 245554
No 229
>TIGR02095 glgA glycogen/starch synthases, ADP-glucose type. This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate.
Probab=32.42 E-value=66 Score=32.63 Aligned_cols=37 Identities=19% Similarity=0.167 Sum_probs=25.8
Q ss_pred EEEEEcCC------CCCChHHHHHHHHHHHhCCCCeEEEEEecCC
Q 045570 5 ELIFVPSP------GIGHLVSTLEFAKHLTDRDDRISVTILSMKL 43 (468)
Q Consensus 5 ~i~~~~~p------~~GH~~P~l~La~~L~~rGH~~~Vt~~~~~~ 43 (468)
||+++++= +-|=-.-.-.|+++|+++||+ |.++++..
T Consensus 2 ~i~~vs~E~~P~~k~GGl~~~v~~L~~aL~~~G~~--v~v~~p~y 44 (473)
T TIGR02095 2 RVLFVAAEMAPFAKTGGLADVVGALPKALAALGHD--VRVLLPAY 44 (473)
T ss_pred eEEEEEeccccccCcCcHHHHHHHHHHHHHHcCCe--EEEEecCC
Confidence 47777643 222233456899999999999 88998753
No 230
>PRK08760 replicative DNA helicase; Provisional
Probab=31.92 E-value=2.4e+02 Score=28.79 Aligned_cols=37 Identities=22% Similarity=0.387 Sum_probs=30.7
Q ss_pred EEEEEcCCCCCChHHHHHHHHHHHh-CCCCeEEEEEecCC
Q 045570 5 ELIFVPSPGIGHLVSTLEFAKHLTD-RDDRISVTILSMKL 43 (468)
Q Consensus 5 ~i~~~~~p~~GH~~P~l~La~~L~~-rGH~~~Vt~~~~~~ 43 (468)
-+++...|+.|-..=.+.+|...+. .|+. |.+++.+-
T Consensus 231 LivIaarPg~GKTafal~iA~~~a~~~g~~--V~~fSlEM 268 (476)
T PRK08760 231 LIILAARPAMGKTTFALNIAEYAAIKSKKG--VAVFSMEM 268 (476)
T ss_pred eEEEEeCCCCChhHHHHHHHHHHHHhcCCc--eEEEeccC
Confidence 3678888999999999999998874 4876 88888763
No 231
>PRK05632 phosphate acetyltransferase; Reviewed
Probab=31.62 E-value=6e+02 Score=27.32 Aligned_cols=38 Identities=18% Similarity=0.420 Sum_probs=29.7
Q ss_pred CCCcEEEEEc-CCCCCChHHHHHHHHHHHhCCCCeEEEEEec
Q 045570 1 MKKAELIFVP-SPGIGHLVSTLEFAKHLTDRDDRISVTILSM 41 (468)
Q Consensus 1 m~k~~i~~~~-~p~~GH~~P~l~La~~L~~rGH~~~Vt~~~~ 41 (468)
|.| .|.+.+ -+..|-..-.+.|++.|.++|.+ |.++-|
T Consensus 1 m~k-~l~I~~T~t~~GKT~vslgL~~~L~~~G~~--Vg~fKP 39 (684)
T PRK05632 1 MSR-SIYLAPTGTGVGLTSVSLGLMRALERKGVK--VGFFKP 39 (684)
T ss_pred CCc-EEEEEECCCCCCHHHHHHHHHHHHHhCCCe--EEEeCC
Confidence 444 466664 44689999999999999999966 888875
No 232
>PRK06270 homoserine dehydrogenase; Provisional
Probab=31.62 E-value=3.9e+02 Score=25.77 Aligned_cols=58 Identities=16% Similarity=0.182 Sum_probs=33.7
Q ss_pred cHHHhhhccccceeee------ccC---chhHHHHHhcCCcEEe---ccCccccchhHHHHHhhhceEEEe
Q 045570 347 PQVEILAHKAIGGFVS------HCG---WNSILESLWYGVPIAT---WPIYAEQQLNAFRMVKELGLALDL 405 (468)
Q Consensus 347 pq~~iL~~~~~~~~i~------HgG---~~s~~eal~~GvP~v~---~P~~~DQ~~na~~~~~~~G~G~~~ 405 (468)
+..++|..++...+|- |+| ..-+.+++.+|+++|+ -|+...-.... .+++..|+.+..
T Consensus 80 d~~ell~~~~~DvVvd~T~s~~~~~~~a~~~~~~aL~~GkhVVtaNK~pla~~~~eL~-~~A~~~g~~~~~ 149 (341)
T PRK06270 80 SGLEVIRSVDADVVVEATPTNIETGEPALSHCRKALERGKHVVTSNKGPLALAYKELK-ELAKKNGVRFRY 149 (341)
T ss_pred CHHHHhhccCCCEEEECCcCcccccchHHHHHHHHHHCCCEEEcCCcHHHHhhHHHHH-HHHHHcCCEEEE
Confidence 4566776554433555 443 4456899999999999 47654322222 333333665544
No 233
>TIGR02015 BchY chlorophyllide reductase subunit Y. This model represents the Y subunit of the three-subunit enzyme, (bacterio)chlorophyllide reductase. This enzyme is responsible for the reduction of the chlorin B-ring and is closely related to the protochlorophyllide reductase complex which reduces the D-ring. Both of these complexes in turn are homologous to nitrogenase.
Probab=31.29 E-value=4.7e+02 Score=26.17 Aligned_cols=26 Identities=23% Similarity=0.351 Sum_probs=20.9
Q ss_pred CCccEEEEcCCcchHHHHHHHcCCCeEEE
Q 045570 111 LQVTGLVLDFFCVSMVDIAKELSLPSYMF 139 (468)
Q Consensus 111 ~~~D~vv~D~~~~~~~~~A~~lgiP~v~~ 139 (468)
.+||++|... ....+|+++|||.+.+
T Consensus 354 ~~pDllig~s---~~~~~A~k~gIP~vr~ 379 (422)
T TIGR02015 354 FEPDLAIGTT---PLVQFAKEHGIPALYF 379 (422)
T ss_pred CCCCEEEcCC---cchHHHHHcCCCEEEe
Confidence 3999999885 3566799999998863
No 234
>cd01980 Chlide_reductase_Y Chlide_reductase_Y : Y subunit of chlorophyllide (chlide) reductase (BchY). Chlide reductase participates in photosynthetic pigment synthesis playing a role in the conversion of chlorophylls(Chl) into bacteriochlorophylls (BChl). Chlide reductase catalyzes the reduction of the B-ring of the tetrapyrolle. Chlide reductase is a three subunit enzyme (subunits are designated BchX, BchY and BchZ). The similarity between these three subunits and the subunits for nitrogenase suggests that BchX serves as an electron donor for the BchY-BchY catalytic subunits.
Probab=31.16 E-value=3.5e+02 Score=27.00 Aligned_cols=25 Identities=20% Similarity=0.285 Sum_probs=20.5
Q ss_pred CccEEEEcCCcchHHHHHHHcCCCeEEE
Q 045570 112 QVTGLVLDFFCVSMVDIAKELSLPSYMF 139 (468)
Q Consensus 112 ~~D~vv~D~~~~~~~~~A~~lgiP~v~~ 139 (468)
+||++|... .+..+|+++|||.+.+
T Consensus 350 ~pDl~Ig~s---~~~~~a~~~giP~~r~ 374 (416)
T cd01980 350 RPDLAIGTT---PLVQYAKEKGIPALYY 374 (416)
T ss_pred CCCEEEeCC---hhhHHHHHhCCCEEEe
Confidence 899999874 4667899999998753
No 235
>PRK00784 cobyric acid synthase; Provisional
Probab=30.90 E-value=3.7e+02 Score=27.52 Aligned_cols=35 Identities=17% Similarity=0.216 Sum_probs=27.7
Q ss_pred EEEEEcC-CCCCChHHHHHHHHHHHhCCCCeEEEEEec
Q 045570 5 ELIFVPS-PGIGHLVSTLEFAKHLTDRDDRISVTILSM 41 (468)
Q Consensus 5 ~i~~~~~-p~~GH~~P~l~La~~L~~rGH~~~Vt~~~~ 41 (468)
+|.+... ..-|-..-...|++.|+++|.+ |..+-+
T Consensus 4 ~ifItGT~T~vGKT~vt~~L~~~l~~~G~~--v~~~Kp 39 (488)
T PRK00784 4 ALMVQGTASDAGKSTLVAGLCRILARRGYR--VAPFKA 39 (488)
T ss_pred eEEEEeCCCCCcHHHHHHHHHHHHHHCCCe--Eecccc
Confidence 4666644 4689999999999999999966 776655
No 236
>PF07894 DUF1669: Protein of unknown function (DUF1669); InterPro: IPR012461 This family is composed of sequences derived from hypothetical eukaryotic proteins of unknown function. Some members of this family are annotated as being potential phospholipases but no literature was found to support this.
Probab=30.01 E-value=82 Score=29.37 Aligned_cols=47 Identities=23% Similarity=0.500 Sum_probs=34.3
Q ss_pred hchhHHHHHHhhhccCCCCccEEEEcCCcch-----HHHHHHHcCCCeEEEeC
Q 045570 94 HLPNVKNIVSSRSNSGSLQVTGLVLDFFCVS-----MVDIAKELSLPSYMFLT 141 (468)
Q Consensus 94 ~~~~~~~~l~~~~~~~~~~~D~vv~D~~~~~-----~~~~A~~lgiP~v~~~~ 141 (468)
-.+.+++.+++..+++ .+..+||.|.|+-. ...+|.+.+||++.+.-
T Consensus 131 ~~p~IKE~vR~~I~~A-~kVIAIVMD~FTD~dIf~DLleAa~kR~VpVYiLLD 182 (284)
T PF07894_consen 131 GQPHIKEVVRRMIQQA-QKVIAIVMDVFTDVDIFCDLLEAANKRGVPVYILLD 182 (284)
T ss_pred CCCCHHHHHHHHHHHh-cceeEEEeeccccHHHHHHHHHHHHhcCCcEEEEec
Confidence 3457788888776533 48899999998642 35678899999887654
No 237
>PF06925 MGDG_synth: Monogalactosyldiacylglycerol (MGDG) synthase; InterPro: IPR009695 This entry represents a conserved region of approximately 180 residues found towirds the N terminus of a number of plant and bacterial diacylglycerol glucosyltransferases, such as monogalactosyldiacylglycerol synthase [].; GO: 0016758 transferase activity, transferring hexosyl groups, 0009247 glycolipid biosynthetic process
Probab=29.65 E-value=1.6e+02 Score=24.93 Aligned_cols=24 Identities=21% Similarity=0.297 Sum_probs=18.6
Q ss_pred ChHHHHHHHHHHHh-CCCCeEEEEE
Q 045570 16 HLVSTLEFAKHLTD-RDDRISVTIL 39 (468)
Q Consensus 16 H~~P~l~La~~L~~-rGH~~~Vt~~ 39 (468)
|....-+|+++|.+ +|++++|.++
T Consensus 1 H~~aA~Al~eal~~~~~~~~~v~v~ 25 (169)
T PF06925_consen 1 HNSAARALAEALERRRGPDAEVEVV 25 (169)
T ss_pred CHHHHHHHHHHHHhhcCCCCEEEEE
Confidence 77888999999988 6777555543
No 238
>PF12146 Hydrolase_4: Putative lysophospholipase; InterPro: IPR022742 This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length. Many members are annotated as being lysophospholipases, and others as alpha-beta hydrolase fold-containing proteins.
Probab=29.30 E-value=92 Score=22.64 Aligned_cols=30 Identities=10% Similarity=0.028 Sum_probs=27.0
Q ss_pred cEEEEEcCCCCCChHHHHHHHHHHHhCCCC
Q 045570 4 AELIFVPSPGIGHLVSTLEFAKHLTDRDDR 33 (468)
Q Consensus 4 ~~i~~~~~p~~GH~~P~l~La~~L~~rGH~ 33 (468)
.-++++.++...|..=+-.+|+.|++.|..
T Consensus 16 k~~v~i~HG~~eh~~ry~~~a~~L~~~G~~ 45 (79)
T PF12146_consen 16 KAVVVIVHGFGEHSGRYAHLAEFLAEQGYA 45 (79)
T ss_pred CEEEEEeCCcHHHHHHHHHHHHHHHhCCCE
Confidence 458999999999999999999999999944
No 239
>PRK04940 hypothetical protein; Provisional
Probab=28.98 E-value=1.4e+02 Score=25.82 Aligned_cols=32 Identities=6% Similarity=-0.193 Sum_probs=24.2
Q ss_pred CccEEEEcCC-cchHHHHHHHcCCCeEEEeCch
Q 045570 112 QVTGLVLDFF-CVSMVDIAKELSLPSYMFLTSN 143 (468)
Q Consensus 112 ~~D~vv~D~~-~~~~~~~A~~lgiP~v~~~~~~ 143 (468)
++.++|...+ .+|+.-+|+++|+|.|.+.|..
T Consensus 60 ~~~~liGSSLGGyyA~~La~~~g~~aVLiNPAv 92 (180)
T PRK04940 60 ERPLICGVGLGGYWAERIGFLCGIRQVIFNPNL 92 (180)
T ss_pred CCcEEEEeChHHHHHHHHHHHHCCCEEEECCCC
Confidence 4567775554 4689999999999999877643
No 240
>PRK13886 conjugal transfer protein TraL; Provisional
Probab=28.86 E-value=1e+02 Score=28.09 Aligned_cols=40 Identities=13% Similarity=0.248 Sum_probs=34.4
Q ss_pred CCCcEEEEEcCCCCCChHHHHHHHHHHHhCCCCeEEEEEecC
Q 045570 1 MKKAELIFVPSPGIGHLVSTLEFAKHLTDRDDRISVTILSMK 42 (468)
Q Consensus 1 m~k~~i~~~~~p~~GH~~P~l~La~~L~~rGH~~~Vt~~~~~ 42 (468)
|++.+++.-.-++.|-......||..|+.+|+. |.++-..
T Consensus 1 m~~i~~i~~~KGGvGKSt~a~~la~~l~~~g~~--vl~iD~D 40 (241)
T PRK13886 1 MAKIHMVLQGKGGVGKSFIAATIAQYKASKGQK--PLCIDTD 40 (241)
T ss_pred CCeEEEEecCCCCCcHHHHHHHHHHHHHhCCCC--EEEEECC
Confidence 778777777888999999999999999999988 7777553
No 241
>PRK09165 replicative DNA helicase; Provisional
Probab=28.26 E-value=2.9e+02 Score=28.39 Aligned_cols=35 Identities=17% Similarity=0.306 Sum_probs=29.0
Q ss_pred EEEEcCCCCCChHHHHHHHHHHHhC---------------CCCeEEEEEecC
Q 045570 6 LIFVPSPGIGHLVSTLEFAKHLTDR---------------DDRISVTILSMK 42 (468)
Q Consensus 6 i~~~~~p~~GH~~P~l~La~~L~~r---------------GH~~~Vt~~~~~ 42 (468)
+++...|+.|-..=.+.+|...+.+ |.. |.+++.+
T Consensus 220 ivIaarpg~GKT~~al~ia~~~a~~~~~~~~~~~~~~~~~g~~--vl~fSlE 269 (497)
T PRK09165 220 IILAGRPSMGKTALATNIAFNAAKAYRREAQPDGSKKAVNGGV--VGFFSLE 269 (497)
T ss_pred EEEEeCCCCChHHHHHHHHHHHHHhhcccccccccccccCCCe--EEEEeCc
Confidence 6778889999999999999888753 545 8888876
No 242
>cd03412 CbiK_N Anaerobic cobalamin biosynthetic cobalt chelatase (CbiK), N-terminal domain. CbiK is part of the cobalt-early path for cobalamin biosynthesis. It catalyzes the insertion of cobalt into the oxidized form of precorrin-2, factor II (sirohydrochlorin), the second step of the anaerobic branch of vitamin B12 biosynthesis. CbiK belongs to the class II family of chelatases and is a homomeric enzyme that does not require ATP for its enzymatic activity.
Probab=28.05 E-value=1.2e+02 Score=24.53 Aligned_cols=37 Identities=16% Similarity=0.427 Sum_probs=26.5
Q ss_pred cEEEEeccCccccCHHHHHHHHHHHHh--CCCcEEEEEe
Q 045570 272 SVVFLCFGSSGSFDVAQVKEIAIGLER--SGYNFLWSLR 308 (468)
Q Consensus 272 ~vv~vs~GS~~~~~~~~~~~~~~al~~--~~~~~iw~~~ 308 (468)
.++.++|||......+.+..+.+.++. .+..+-|.+-
T Consensus 2 aillv~fGS~~~~~~~~~~~i~~~l~~~~p~~~V~~aft 40 (127)
T cd03412 2 AILLVSFGTSYPTAEKTIDAIEDKVRAAFPDYEVRWAFT 40 (127)
T ss_pred eEEEEeCCCCCHHHHHHHHHHHHHHHHHCCCCeEEEEec
Confidence 489999999876455567888888864 3456666654
No 243
>COG3660 Predicted nucleoside-diphosphate-sugar epimerase [Cell envelope biogenesis, outer membrane]
Probab=27.91 E-value=5e+02 Score=24.15 Aligned_cols=37 Identities=22% Similarity=0.331 Sum_probs=29.4
Q ss_pred EeccHHHhhhccccceee-eccCchhHHHHHhcCCcEEec
Q 045570 344 GWVPQVEILAHKAIGGFV-SHCGWNSILESLWYGVPIATW 382 (468)
Q Consensus 344 ~~vpq~~iL~~~~~~~~i-~HgG~~s~~eal~~GvP~v~~ 382 (468)
++=|+.++|+.++. +| |---.|.+.||.+.|+|+-+.
T Consensus 234 g~NPY~~~La~Ady--ii~TaDSinM~sEAasTgkPv~~~ 271 (329)
T COG3660 234 GYNPYIDMLAAADY--IISTADSINMCSEAASTGKPVFIL 271 (329)
T ss_pred CCCchHHHHhhcce--EEEecchhhhhHHHhccCCCeEEE
Confidence 35599999999887 55 455577889999999998664
No 244
>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain. This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.
Probab=27.62 E-value=4.3e+02 Score=23.31 Aligned_cols=147 Identities=11% Similarity=0.053 Sum_probs=72.0
Q ss_pred CcEEEEeccCccccCHHHHHHHHHHHHhCCCcEEEEEecCCCCCccccccccCCCCCCchhHHHH-hcCCeEEEEeccHH
Q 045570 271 SSVVFLCFGSSGSFDVAQVKEIAIGLERSGYNFLWSLRVSSPKDEVSAHRYVTNNGVFPEGFLER-IKGRGMIWGWVPQV 349 (468)
Q Consensus 271 ~~vv~vs~GS~~~~~~~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~-~~~~~~v~~~vpq~ 349 (468)
++++.|+.|.+. ..-++.|...|..+.+..... .+.+.+. ..+++....--.+.
T Consensus 10 k~vlVvGgG~va-------~rk~~~Ll~~ga~VtVvsp~~------------------~~~l~~l~~~~~i~~~~~~~~~ 64 (205)
T TIGR01470 10 RAVLVVGGGDVA-------LRKARLLLKAGAQLRVIAEEL------------------ESELTLLAEQGGITWLARCFDA 64 (205)
T ss_pred CeEEEECcCHHH-------HHHHHHHHHCCCEEEEEcCCC------------------CHHHHHHHHcCCEEEEeCCCCH
Confidence 457878777643 223455556777766553221 1122111 12344443222234
Q ss_pred HhhhccccceeeeccCchhHHHH-----HhcCCcEEec--cCccccchhHHHHHhhhceEEEeeeccccCCcccChhHHH
Q 045570 350 EILAHKAIGGFVSHCGWNSILES-----LWYGVPIATW--PIYAEQQLNAFRMVKELGLALDLRLDYRVGSDLVMAGDIE 422 (468)
Q Consensus 350 ~iL~~~~~~~~i~HgG~~s~~ea-----l~~GvP~v~~--P~~~DQ~~na~~~~~~~G~G~~~~~~~~~~~~~~~~~~l~ 422 (468)
..|..+++ +|..-|...+.+. -..|+|+-++ |-..|=..=+ .+.+. ++=+.+..+. ....-+..|+
T Consensus 65 ~dl~~~~l--Vi~at~d~~ln~~i~~~a~~~~ilvn~~d~~e~~~f~~pa-~~~~g-~l~iaisT~G---~sP~la~~lr 137 (205)
T TIGR01470 65 DILEGAFL--VIAATDDEELNRRVAHAARARGVPVNVVDDPELCSFIFPS-IVDRS-PVVVAISSGG---AAPVLARLLR 137 (205)
T ss_pred HHhCCcEE--EEECCCCHHHHHHHHHHHHHcCCEEEECCCcccCeEEEee-EEEcC-CEEEEEECCC---CCcHHHHHHH
Confidence 45666666 7777777645443 3468887333 3333322111 22222 3444444321 1233345678
Q ss_pred HHHHHHhcC-cHHHHHHHHHHHHHHHHh
Q 045570 423 SAVRCLMDG-ENKIRKKVKEMAEISRKS 449 (468)
Q Consensus 423 ~av~~vl~~-~~~~~~~a~~l~~~~~~~ 449 (468)
+.|.+.+.. ...+.+.+.++++.+++.
T Consensus 138 ~~ie~~l~~~~~~~~~~~~~~R~~~k~~ 165 (205)
T TIGR01470 138 ERIETLLPPSLGDLATLAATWRDAVKKR 165 (205)
T ss_pred HHHHHhcchhHHHHHHHHHHHHHHHHhh
Confidence 888777752 135556666666666654
No 245
>PLN02929 NADH kinase
Probab=27.55 E-value=82 Score=29.77 Aligned_cols=66 Identities=14% Similarity=0.149 Sum_probs=43.3
Q ss_pred hccccceeeeccCchhHHHHHh---cCCcEEeccCccc------cchhHHHHHhhhceEEEeeeccccCCcccChhHHHH
Q 045570 353 AHKAIGGFVSHCGWNSILESLW---YGVPIATWPIYAE------QQLNAFRMVKELGLALDLRLDYRVGSDLVMAGDIES 423 (468)
Q Consensus 353 ~~~~~~~~i~HgG~~s~~eal~---~GvP~v~~P~~~D------Q~~na~~~~~~~G~G~~~~~~~~~~~~~~~~~~l~~ 423 (468)
..+++ +|+-||-||++.+.+ .++|++++=.... ++.+... +.+ -+|..- ..+.+++.+
T Consensus 63 ~~~Dl--vi~lGGDGT~L~aa~~~~~~iPvlGIN~Gp~~~~~~~~~~~~~~-~~r-~lGfL~---------~~~~~~~~~ 129 (301)
T PLN02929 63 RDVDL--VVAVGGDGTLLQASHFLDDSIPVLGVNSDPTQKDEVEEYSDEFD-ARR-STGHLC---------AATAEDFEQ 129 (301)
T ss_pred CCCCE--EEEECCcHHHHHHHHHcCCCCcEEEEECCCcccccccccccccc-ccc-Cccccc---------cCCHHHHHH
Confidence 34567 999999999999855 4789888765421 2222211 111 344321 556889999
Q ss_pred HHHHHhcC
Q 045570 424 AVRCLMDG 431 (468)
Q Consensus 424 av~~vl~~ 431 (468)
++.+++++
T Consensus 130 ~L~~il~g 137 (301)
T PLN02929 130 VLDDVLFG 137 (301)
T ss_pred HHHHHHcC
Confidence 99999984
No 246
>COG1703 ArgK Putative periplasmic protein kinase ArgK and related GTPases of G3E family [Amino acid transport and metabolism]
Probab=27.36 E-value=1.2e+02 Score=28.59 Aligned_cols=36 Identities=22% Similarity=0.398 Sum_probs=32.0
Q ss_pred cEEEEEcCCCCCChHHHHHHHHHHHhCCCCeEEEEEec
Q 045570 4 AELIFVPSPGIGHLVSTLEFAKHLTDRDDRISVTILSM 41 (468)
Q Consensus 4 ~~i~~~~~p~~GH~~P~l~La~~L~~rGH~~~Vt~~~~ 41 (468)
.+|.|.-.|+.|--.=.=+|.+.|.++||. |.+++-
T Consensus 52 ~viGITG~PGaGKSTli~~L~~~l~~~G~r--VaVlAV 87 (323)
T COG1703 52 HVIGITGVPGAGKSTLIEALGRELRERGHR--VAVLAV 87 (323)
T ss_pred cEEEecCCCCCchHHHHHHHHHHHHHCCcE--EEEEEE
Confidence 478899999999999999999999999999 666664
No 247
>PRK03372 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=27.17 E-value=1.3e+02 Score=28.58 Aligned_cols=54 Identities=19% Similarity=0.162 Sum_probs=39.2
Q ss_pred hccccceeeeccCchhHHHHHhc----CCcEEeccCccccchhHHHHHhhhceEEEeeeccccCCcccChhHHHHHHHHH
Q 045570 353 AHKAIGGFVSHCGWNSILESLWY----GVPIATWPIYAEQQLNAFRMVKELGLALDLRLDYRVGSDLVMAGDIESAVRCL 428 (468)
Q Consensus 353 ~~~~~~~~i~HgG~~s~~eal~~----GvP~v~~P~~~DQ~~na~~~~~~~G~G~~~~~~~~~~~~~~~~~~l~~av~~v 428 (468)
..+++ +|+=||-||++.+++. ++|++++... .+|.-- ....+++.+++.++
T Consensus 71 ~~~D~--vi~lGGDGT~L~aar~~~~~~~PilGIN~G--------------~lGFL~---------~~~~~~~~~~l~~i 125 (306)
T PRK03372 71 DGCEL--VLVLGGDGTILRAAELARAADVPVLGVNLG--------------HVGFLA---------EAEAEDLDEAVERV 125 (306)
T ss_pred cCCCE--EEEEcCCHHHHHHHHHhccCCCcEEEEecC--------------CCceec---------cCCHHHHHHHHHHH
Confidence 45677 9999999999998764 7888888541 233321 44578888888888
Q ss_pred hcC
Q 045570 429 MDG 431 (468)
Q Consensus 429 l~~ 431 (468)
+++
T Consensus 126 ~~g 128 (306)
T PRK03372 126 VDR 128 (306)
T ss_pred HcC
Confidence 874
No 248
>PRK04539 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=26.64 E-value=1.7e+02 Score=27.60 Aligned_cols=54 Identities=13% Similarity=0.059 Sum_probs=38.7
Q ss_pred hccccceeeeccCchhHHHHHh----cCCcEEeccCccccchhHHHHHhhhceEEEeeeccccCCcccChhHHHHHHHHH
Q 045570 353 AHKAIGGFVSHCGWNSILESLW----YGVPIATWPIYAEQQLNAFRMVKELGLALDLRLDYRVGSDLVMAGDIESAVRCL 428 (468)
Q Consensus 353 ~~~~~~~~i~HgG~~s~~eal~----~GvP~v~~P~~~DQ~~na~~~~~~~G~G~~~~~~~~~~~~~~~~~~l~~av~~v 428 (468)
..+++ +|+=||=||++.+.+ .++|++++-.. .+|.- . .++.+++.++++++
T Consensus 67 ~~~D~--vi~lGGDGT~L~aa~~~~~~~~PilGIN~G--------------~lGFL-~--------~~~~~~~~~~l~~i 121 (296)
T PRK04539 67 QYCDL--VAVLGGDGTFLSVAREIAPRAVPIIGINQG--------------HLGFL-T--------QIPREYMTDKLLPV 121 (296)
T ss_pred cCCCE--EEEECCcHHHHHHHHHhcccCCCEEEEecC--------------CCeEe-e--------ccCHHHHHHHHHHH
Confidence 45777 999999999999975 37888887321 13332 1 45678888888888
Q ss_pred hcC
Q 045570 429 MDG 431 (468)
Q Consensus 429 l~~ 431 (468)
+++
T Consensus 122 ~~g 124 (296)
T PRK04539 122 LEG 124 (296)
T ss_pred HcC
Confidence 874
No 249
>PRK07710 acetolactate synthase catalytic subunit; Reviewed
Probab=26.61 E-value=3.5e+02 Score=28.27 Aligned_cols=26 Identities=12% Similarity=0.383 Sum_probs=21.7
Q ss_pred ceeeeccCch------hHHHHHhcCCcEEecc
Q 045570 358 GGFVSHCGWN------SILESLWYGVPIATWP 383 (468)
Q Consensus 358 ~~~i~HgG~~------s~~eal~~GvP~v~~P 383 (468)
+++++|.|-| .+.+|...++|+|++-
T Consensus 80 gv~~~t~GPG~~N~~~gl~~A~~~~~Pvl~It 111 (571)
T PRK07710 80 GVVIATSGPGATNVVTGLADAMIDSLPLVVFT 111 (571)
T ss_pred eEEEECCCccHHHHHHHHHHHhhcCCCEEEEe
Confidence 4489998866 6789999999999984
No 250
>PRK15062 hydrogenase isoenzymes formation protein HypD; Provisional
Probab=25.79 E-value=3.1e+02 Score=26.59 Aligned_cols=41 Identities=17% Similarity=0.180 Sum_probs=22.5
Q ss_pred HhhhcCCCCcEEEEeccCccccCHHHHHHHHHHHHhCCCcEE
Q 045570 263 QWLDDLAESSVVFLCFGSSGSFDVAQVKEIAIGLERSGYNFL 304 (468)
Q Consensus 263 ~~l~~~~~~~vv~vs~GS~~~~~~~~~~~~~~al~~~~~~~i 304 (468)
+...+.+++.|||++-|-.++. +.....+.+|-++.-.+|-
T Consensus 123 ~iA~~nP~k~vVF~avGFETTa-P~~A~~i~~A~~~~~~Nfs 163 (364)
T PRK15062 123 KIARENPDKEVVFFAIGFETTA-PATAATLLQAKAEGLKNFS 163 (364)
T ss_pred HHHHHCCCCeEEEEecCchhcc-HHHHHHHHHHHHcCCCCEE
Confidence 3344556778999998875542 3333445455444333433
No 251
>TIGR00725 conserved hypothetical protein, DprA/Smf-related, family 1. This model represents one branch of a subfamily of uncharacterized proteins. Both PSI-BLAST and weak hits by this model show a low level of similarity and suggest an evolutionary relationship of the subfamily to the DprA/Smf family of DNA-processing proteins involved in chromosomal transformation with foreign DNA. Both Aquifex aeolicus and Mycobacterium leprae have one member in each of two branches of this subfamily, suggesting the branches may have distinct functions. This family is one of several families within the scope of PFAM model pfam03641, several members of which are annotated as lysine decarboxylases. That larger family, and the branch described by this model, have a well-conserved motif PGGXGTXXE.
Probab=25.55 E-value=4.1e+02 Score=22.36 Aligned_cols=37 Identities=16% Similarity=0.128 Sum_probs=25.2
Q ss_pred cHHHhh-hccccceeeeccCchhHHH---HHhcCCcEEeccC
Q 045570 347 PQVEIL-AHKAIGGFVSHCGWNSILE---SLWYGVPIATWPI 384 (468)
Q Consensus 347 pq~~iL-~~~~~~~~i~HgG~~s~~e---al~~GvP~v~~P~ 384 (468)
+-..++ ..++ ..++--||.||+.| ++.+++|+++++.
T Consensus 83 ~Rk~~m~~~sd-a~IvlpGG~GTL~E~~~a~~~~kpv~~l~~ 123 (159)
T TIGR00725 83 ARNFILVRSAD-VVVSVGGGYGTAIEILGAYALGGPVVVLRG 123 (159)
T ss_pred hHHHHHHHHCC-EEEEcCCchhHHHHHHHHHHcCCCEEEEEC
Confidence 344444 4455 44556788887655 5789999999885
No 252
>TIGR02370 pyl_corrinoid methyltransferase cognate corrinoid proteins, Methanosarcina family. This model describes a subfamily of the B12 binding domain (pfam02607, pfam02310) proteins. Members of the seed alignment include corrinoid proteins specific to four different, mutally non-homologous enzymes of the genus Methanosarcina. Three of the four cognate enzymes (trimethylamine, dimethylamine, and monomethylamine methyltransferases) all have the unusual, ribosomally incorporated amino acid pyrrolysine at the active site. All act in systems in which a methyl group is transferred to the corrinoid protein to create methylcobalamin, from which the methyl group is later transferred elsewhere.
Probab=25.29 E-value=1.2e+02 Score=26.73 Aligned_cols=38 Identities=13% Similarity=-0.007 Sum_probs=34.2
Q ss_pred CcEEEEEcCCCCCChHHHHHHHHHHHhCCCCeEEEEEecC
Q 045570 3 KAELIFVPSPGIGHLVSTLEFAKHLTDRDDRISVTILSMK 42 (468)
Q Consensus 3 k~~i~~~~~p~~GH~~P~l~La~~L~~rGH~~~Vt~~~~~ 42 (468)
+.+|++.+.++-.|-....-++..|..+|.+ |+++...
T Consensus 84 ~~~vv~~t~~gd~H~lG~~~v~~~l~~~G~~--vi~LG~~ 121 (197)
T TIGR02370 84 LGKVVCGVAEGDVHDIGKNIVVTMLRANGFD--VIDLGRD 121 (197)
T ss_pred CCeEEEEeCCCchhHHHHHHHHHHHHhCCcE--EEECCCC
Confidence 4689999999999999999999999999965 9888765
No 253
>KOG0081 consensus GTPase Rab27, small G protein superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=25.10 E-value=1.6e+02 Score=24.85 Aligned_cols=42 Identities=17% Similarity=0.131 Sum_probs=27.2
Q ss_pred hHHHHHHhhhc-cCCCCccEEEEcCCc----------chHHHHHHHcCCCeEE
Q 045570 97 NVKNIVSSRSN-SGSLQVTGLVLDFFC----------VSMVDIAKELSLPSYM 138 (468)
Q Consensus 97 ~~~~~l~~~~~-~~~~~~D~vv~D~~~----------~~~~~~A~~lgiP~v~ 138 (468)
.+++++.++.. +-+.+||+|++...+ --+..+|+++|+|++-
T Consensus 108 nvrnWlSQL~~hAYcE~PDivlcGNK~DL~~~R~Vs~~qa~~La~kyglPYfE 160 (219)
T KOG0081|consen 108 NVRNWLSQLQTHAYCENPDIVLCGNKADLEDQRVVSEDQAAALADKYGLPYFE 160 (219)
T ss_pred HHHHHHHHHHHhhccCCCCEEEEcCccchhhhhhhhHHHHHHHHHHhCCCeee
Confidence 34455555432 235689999975432 1356789999999764
No 254
>PF01995 DUF128: Domain of unknown function DUF128; InterPro: IPR002846 These archaebacterial proteins have no known function. The domain is found duplicated in some sequences.; PDB: 3NEK_B.
Probab=25.02 E-value=2.6e+02 Score=25.43 Aligned_cols=80 Identities=19% Similarity=0.233 Sum_probs=48.6
Q ss_pred CCcEEEEeccCccccCHHHHHHHHHHHHhCCCcEEEEEecCCCCCccccccccCCCCCCchhHHHHhcCCeEEEEeccHH
Q 045570 270 ESSVVFLCFGSSGSFDVAQVKEIAIGLERSGYNFLWSLRVSSPKDEVSAHRYVTNNGVFPEGFLERIKGRGMIWGWVPQV 349 (468)
Q Consensus 270 ~~~vv~vs~GS~~~~~~~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~v~~~vpq~ 349 (468)
..+.|..+|=.+.....+.+.++++.|++.+..-+..+|.... ..+. +.+
T Consensus 144 G~G~ilAn~ReiP~~a~e~~~~il~~l~~~g~~Gil~iG~p~~-------------~vlg----------vpv------- 193 (236)
T PF01995_consen 144 GEGKILANFREIPMSAREKAEEILEKLEKAGFSGILEIGEPNE-------------PVLG----------VPV------- 193 (236)
T ss_dssp SSSEEEEEEEEEETTTHHHHHHHHHHH---T-TTEEEE--TT---------------BTT----------B---------
T ss_pred CCceEeeeeecCchhHHHHHHHHHHHhhhcccceeEEeCCCCC-------------cccC----------Ccc-------
Confidence 3468999998888889999999999999999998888886421 1110 001
Q ss_pred HhhhccccceeeeccCchhHHHHHhcCCcEEecc
Q 045570 350 EILAHKAIGGFVSHCGWNSILESLWYGVPIATWP 383 (468)
Q Consensus 350 ~iL~~~~~~~~i~HgG~~s~~eal~~GvP~v~~P 383 (468)
..+-.+++.=||.|-+.-+.-+|.|+-.-+
T Consensus 194 ----~~~~~Giv~~GG~Npia~~~E~Gi~i~~~~ 223 (236)
T PF01995_consen 194 ----EPGMVGIVVIGGLNPIAAAVEAGIPIEIKA 223 (236)
T ss_dssp -----TTEEEEEEE-TTHHHHHHHHTT---EEEE
T ss_pred ----CCCeEEEEEEecCcHHHHHHHcCCeeEeee
Confidence 011223677799999999988888876544
No 255
>PRK06249 2-dehydropantoate 2-reductase; Provisional
Probab=25.01 E-value=81 Score=29.97 Aligned_cols=35 Identities=14% Similarity=0.111 Sum_probs=27.6
Q ss_pred CCCcEEEEEcCCCCCChHHHHHHHHHHHhCCCCeEEEEEecC
Q 045570 1 MKKAELIFVPSPGIGHLVSTLEFAKHLTDRDDRISVTILSMK 42 (468)
Q Consensus 1 m~k~~i~~~~~p~~GH~~P~l~La~~L~~rGH~~~Vt~~~~~ 42 (468)
|.+++|+++-.++.| --+|..|+++||+ |+++...
T Consensus 3 ~~~m~I~IiG~GaiG-----~~lA~~L~~~g~~--V~~~~r~ 37 (313)
T PRK06249 3 SETPRIGIIGTGAIG-----GFYGAMLARAGFD--VHFLLRS 37 (313)
T ss_pred CcCcEEEEECCCHHH-----HHHHHHHHHCCCe--EEEEEeC
Confidence 456789999777776 3467889999999 9988864
No 256
>PRK02649 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=25.01 E-value=1.2e+02 Score=28.81 Aligned_cols=54 Identities=15% Similarity=0.236 Sum_probs=38.3
Q ss_pred hccccceeeeccCchhHHHHHhc----CCcEEeccCccccchhHHHHHhhhceEEEeeeccccCCcccChhHHHHHHHHH
Q 045570 353 AHKAIGGFVSHCGWNSILESLWY----GVPIATWPIYAEQQLNAFRMVKELGLALDLRLDYRVGSDLVMAGDIESAVRCL 428 (468)
Q Consensus 353 ~~~~~~~~i~HgG~~s~~eal~~----GvP~v~~P~~~DQ~~na~~~~~~~G~G~~~~~~~~~~~~~~~~~~l~~av~~v 428 (468)
..+++ +|+=||=||++.+.+. ++|++.+-. - .+|.. . .++.+++.++++++
T Consensus 67 ~~~Dl--vi~iGGDGTlL~aar~~~~~~iPilGIN~-------------G-~lGFL-t--------~~~~~~~~~~l~~l 121 (305)
T PRK02649 67 SSMKF--AIVLGGDGTVLSAARQLAPCGIPLLTINT-------------G-HLGFL-T--------EAYLNQLDEAIDQV 121 (305)
T ss_pred cCcCE--EEEEeCcHHHHHHHHHhcCCCCcEEEEeC-------------C-CCccc-c--------cCCHHHHHHHHHHH
Confidence 34666 9999999999999774 788888732 1 22321 1 44678888888888
Q ss_pred hcC
Q 045570 429 MDG 431 (468)
Q Consensus 429 l~~ 431 (468)
+++
T Consensus 122 ~~g 124 (305)
T PRK02649 122 LAG 124 (305)
T ss_pred HcC
Confidence 874
No 257
>KOG2941 consensus Beta-1,4-mannosyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=24.85 E-value=6.5e+02 Score=24.48 Aligned_cols=61 Identities=21% Similarity=0.258 Sum_probs=45.5
Q ss_pred CCcEEEEEcCCCCCChHHHHHHHHHHHhCCCCeEEEEEecCCCCChhhhhhhcccCCCCCCeEEEeCCCC
Q 045570 2 KKAELIFVPSPGIGHLVSTLEFAKHLTDRDDRISVTILSMKLAVAPWVDAYTKSLTDSQPRICVIDLPPV 71 (468)
Q Consensus 2 ~k~~i~~~~~p~~GH~~P~l~La~~L~~rGH~~~Vt~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 71 (468)
+|.|++++..+--||--=|-.=|..|+..|.+ |.++.--... -.+.+.. .++|+++.++..
T Consensus 11 ~k~ra~vvVLGDvGRSPRMqYHA~Sla~~gf~--VdliGy~~s~------p~e~l~~-hprI~ih~m~~l 71 (444)
T KOG2941|consen 11 KKKRAIVVVLGDVGRSPRMQYHALSLAKLGFQ--VDLIGYVESI------PLEELLN-HPRIRIHGMPNL 71 (444)
T ss_pred ccceEEEEEecccCCChHHHHHHHHHHHcCCe--EEEEEecCCC------ChHHHhc-CCceEEEeCCCC
Confidence 47799999999999999999999999999966 8877642110 1111222 578999998764
No 258
>PRK03378 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=24.84 E-value=1.2e+02 Score=28.61 Aligned_cols=56 Identities=11% Similarity=0.100 Sum_probs=38.6
Q ss_pred hhhccccceeeeccCchhHHHHHh----cCCcEEeccCccccchhHHHHHhhhceEEEeeeccccCCcccChhHHHHHHH
Q 045570 351 ILAHKAIGGFVSHCGWNSILESLW----YGVPIATWPIYAEQQLNAFRMVKELGLALDLRLDYRVGSDLVMAGDIESAVR 426 (468)
Q Consensus 351 iL~~~~~~~~i~HgG~~s~~eal~----~GvP~v~~P~~~DQ~~na~~~~~~~G~G~~~~~~~~~~~~~~~~~~l~~av~ 426 (468)
+...+++ +|+=||-||++.+++ +++|++.+-.. .+|.. . .++++++.++++
T Consensus 60 ~~~~~d~--vi~lGGDGT~L~aa~~~~~~~~Pilgin~G--------------~lGFl-~--------~~~~~~~~~~l~ 114 (292)
T PRK03378 60 IGQQADL--AIVVGGDGNMLGAARVLARYDIKVIGINRG--------------NLGFL-T--------DLDPDNALQQLS 114 (292)
T ss_pred cCCCCCE--EEEECCcHHHHHHHHHhcCCCCeEEEEECC--------------CCCcc-c--------ccCHHHHHHHHH
Confidence 3345677 999999999999975 36787776331 12321 1 445788888998
Q ss_pred HHhcC
Q 045570 427 CLMDG 431 (468)
Q Consensus 427 ~vl~~ 431 (468)
+++++
T Consensus 115 ~i~~g 119 (292)
T PRK03378 115 DVLEG 119 (292)
T ss_pred HHHcC
Confidence 88874
No 259
>PRK07206 hypothetical protein; Provisional
Probab=24.72 E-value=2.1e+02 Score=28.36 Aligned_cols=34 Identities=15% Similarity=0.098 Sum_probs=22.7
Q ss_pred CCCcEEEEEcCCCCCChHHHHHHHHHHHhCCCCeEEEEEecC
Q 045570 1 MKKAELIFVPSPGIGHLVSTLEFAKHLTDRDDRISVTILSMK 42 (468)
Q Consensus 1 m~k~~i~~~~~p~~GH~~P~l~La~~L~~rGH~~~Vt~~~~~ 42 (468)
|+| +|+++-.... -..++++++++|++ +.+++..
T Consensus 1 ~~k-~~liv~~~~~-----~~~~~~a~~~~G~~--~v~v~~~ 34 (416)
T PRK07206 1 MMK-KVVIVDPFSS-----GKFLAPAFKKRGIE--PIAVTSS 34 (416)
T ss_pred CCC-eEEEEcCCch-----HHHHHHHHHHcCCe--EEEEEcC
Confidence 544 4777765433 34688999999976 6666653
No 260
>cd07035 TPP_PYR_POX_like Pyrimidine (PYR) binding domain of POX and related proteins. Thiamine pyrophosphate (TPP family), pyrimidine (PYR) binding domain of pyruvate oxidase (POX) and related protiens subfamily. The PYR domain is found in many key metabolic enzymes which use TPP (also known as thiamine diphosphate) as a cofactor. TPP binds in the cleft formed by a PYR domain and a PP domain. The PYR domain, binds the aminopyrimidine ring of TPP, the PP domain binds the diphosphate residue. A polar interaction between the conserved glutamate of the PYR domain and the N1' of the TPP aminopyrimidine ring is shared by most TPP-dependent enzymes, and participates in the activation of TPP. For glyoxylate carboligase, which belongs to this subfamily, but lacks this conserved glutamate, the rate of the initial TPP activation step is reduced but the ensuing steps of the enzymic reaction proceed efficiently. The PYR and PP domains have a common fold, but do not share strong sequence conservatio
Probab=24.56 E-value=2.1e+02 Score=23.53 Aligned_cols=26 Identities=8% Similarity=0.086 Sum_probs=20.8
Q ss_pred eeeeccCc------hhHHHHHhcCCcEEeccC
Q 045570 359 GFVSHCGW------NSILESLWYGVPIATWPI 384 (468)
Q Consensus 359 ~~i~HgG~------~s~~eal~~GvP~v~~P~ 384 (468)
++++|+|- +.+.++...++|+|++.-
T Consensus 62 v~~~~~gpG~~n~~~~l~~A~~~~~Pll~i~~ 93 (155)
T cd07035 62 VVLVTSGPGLTNAVTGLANAYLDSIPLLVITG 93 (155)
T ss_pred EEEEcCCCcHHHHHHHHHHHHhhCCCEEEEeC
Confidence 38888664 478899999999999853
No 261
>TIGR00665 DnaB replicative DNA helicase. This model describes the helicase DnaB, a homohexameric protein required for DNA replication. The homohexamer can form a ring around a single strand of DNA near a replication fork. An intein of 400 residues is found at a conserved location in DnaB of Synechocystis PCC6803, Rhodothermus marinus (both experimentally confirmed), and Mycobacterium tuberculosis. The intein removes itself by a self-splicing reaction. The seed alignment contains inteins so that the model built from the seed alignment will model a low cost at common intein insertion sites.
Probab=24.33 E-value=5.3e+02 Score=25.75 Aligned_cols=39 Identities=18% Similarity=0.378 Sum_probs=31.7
Q ss_pred EEEEEcCCCCCChHHHHHHHHHHHh-CCCCeEEEEEecCCCC
Q 045570 5 ELIFVPSPGIGHLVSTLEFAKHLTD-RDDRISVTILSMKLAV 45 (468)
Q Consensus 5 ~i~~~~~p~~GH~~P~l~La~~L~~-rGH~~~Vt~~~~~~~~ 45 (468)
-+++...|+.|-..=.+.++..++. .|+. |.+++.+...
T Consensus 197 l~vi~g~pg~GKT~~~l~~a~~~a~~~g~~--vl~~SlEm~~ 236 (434)
T TIGR00665 197 LIILAARPSMGKTAFALNIAENAAIKEGKP--VAFFSLEMSA 236 (434)
T ss_pred EEEEEeCCCCChHHHHHHHHHHHHHhCCCe--EEEEeCcCCH
Confidence 3677888999999999999999875 5866 8899887443
No 262
>TIGR02852 spore_dpaB dipicolinic acid synthetase, B subunit. Members of this family represent the B subunit of dipicolinic acid synthetase, an enzyme that synthesizes a small molecule that appears to confer heat stability to bacterial endospores such as those of Bacillus subtilis. The A and B subunits are together in what was originally designated the spoVF locus for stage V of endospore formation.
Probab=24.23 E-value=83 Score=27.41 Aligned_cols=36 Identities=17% Similarity=0.128 Sum_probs=29.5
Q ss_pred EEEEEcCCCCCChHHHHHHHHHHHhCCCCeEEEEEecC
Q 045570 5 ELIFVPSPGIGHLVSTLEFAKHLTDRDDRISVTILSMK 42 (468)
Q Consensus 5 ~i~~~~~p~~GH~~P~l~La~~L~~rGH~~~Vt~~~~~ 42 (468)
||++--.++.|=+.-.+.+.+.|.++|++ |+++.++
T Consensus 2 ~I~lgITGs~~a~~a~~~ll~~L~~~g~~--V~vI~S~ 37 (187)
T TIGR02852 2 RIGFGLTGSHCTLEAVMPQLEKLVDEGAE--VTPIVSE 37 (187)
T ss_pred EEEEEEecHHHHHHHHHHHHHHHHhCcCE--EEEEEch
Confidence 57777777777777777999999999988 8877775
No 263
>PRK11253 ldcA L,D-carboxypeptidase A; Provisional
Probab=24.15 E-value=1.7e+02 Score=27.72 Aligned_cols=28 Identities=7% Similarity=0.083 Sum_probs=21.7
Q ss_pred cccCHHHHHHHHHHH--HhCCCcEEEEEecC
Q 045570 282 GSFDVAQVKEIAIGL--ERSGYNFLWSLRVS 310 (468)
Q Consensus 282 ~~~~~~~~~~~~~al--~~~~~~~iw~~~~~ 310 (468)
...+.+....+.+++ .+. ++.||.++++
T Consensus 47 agtd~~Ra~dL~~a~a~~dp-i~aI~~~rGG 76 (305)
T PRK11253 47 AGTDGERLADLNSLADLTTP-NTIVLAVRGG 76 (305)
T ss_pred CCCHHHHHHHHHHHHhcCCC-ccEEEEeccc
Confidence 344556688899988 666 9999999886
No 264
>TIGR02655 circ_KaiC circadian clock protein KaiC. Members of this family are the circadian clock protein KaiC, part of the kaiABC operon that controls circadian rhythm. It may be universal in Cyanobacteria. Each member has two copies of the KaiC domain (Pfam model pfam06745), which is also found in other proteins. KaiC performs autophosphorylation and acts as its own transcriptional repressor.
Probab=24.08 E-value=7.3e+02 Score=25.32 Aligned_cols=40 Identities=13% Similarity=0.255 Sum_probs=33.6
Q ss_pred EEEEEcCCCCCChHHHHHHHHHHHhCCCCeEEEEEecCCCCC
Q 045570 5 ELIFVPSPGIGHLVSTLEFAKHLTDRDDRISVTILSMKLAVA 46 (468)
Q Consensus 5 ~i~~~~~p~~GH~~P~l~La~~L~~rGH~~~Vt~~~~~~~~~ 46 (468)
-+++.-.|+.|-..=.++++...+++|+. +.+++.++...
T Consensus 265 ~~li~G~~G~GKt~l~~~f~~~~~~~ge~--~~y~s~eEs~~ 304 (484)
T TIGR02655 265 IILATGATGTGKTLLVSKFLENACANKER--AILFAYEESRA 304 (484)
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHHCCCe--EEEEEeeCCHH
Confidence 36777788999999999999999999987 88998875433
No 265
>PRK06029 3-octaprenyl-4-hydroxybenzoate carboxy-lyase; Provisional
Probab=23.95 E-value=85 Score=27.29 Aligned_cols=37 Identities=22% Similarity=0.264 Sum_probs=29.6
Q ss_pred CCCcEEEEEcCCCCCChHHHHHHHHHHHh-CCCCeEEEEEecC
Q 045570 1 MKKAELIFVPSPGIGHLVSTLEFAKHLTD-RDDRISVTILSMK 42 (468)
Q Consensus 1 m~k~~i~~~~~p~~GH~~P~l~La~~L~~-rGH~~~Vt~~~~~ 42 (468)
||+ |++--.++-| .+=...|++.|.+ .||+ |.++.++
T Consensus 1 ~k~--IllgVTGsia-a~ka~~l~~~L~k~~g~~--V~vv~T~ 38 (185)
T PRK06029 1 MKR--LIVGISGASG-AIYGVRLLQVLRDVGEIE--THLVISQ 38 (185)
T ss_pred CCE--EEEEEECHHH-HHHHHHHHHHHHhhcCCe--EEEEECH
Confidence 554 8777777777 6669999999999 5988 8888886
No 266
>PRK08322 acetolactate synthase; Reviewed
Probab=23.91 E-value=4.3e+02 Score=27.34 Aligned_cols=27 Identities=19% Similarity=0.219 Sum_probs=22.2
Q ss_pred cceeeeccCch------hHHHHHhcCCcEEecc
Q 045570 357 IGGFVSHCGWN------SILESLWYGVPIATWP 383 (468)
Q Consensus 357 ~~~~i~HgG~~------s~~eal~~GvP~v~~P 383 (468)
.+++++|.|-| ++.+|...++|+|++-
T Consensus 64 ~gv~~~t~GpG~~N~~~~i~~A~~~~~Pll~i~ 96 (547)
T PRK08322 64 AGVCLSTLGPGATNLVTGVAYAQLGGMPMVAIT 96 (547)
T ss_pred CEEEEECCCccHhHHHHHHHHHhhcCCCEEEEe
Confidence 34489898854 8899999999999984
No 267
>KOG2941 consensus Beta-1,4-mannosyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=23.68 E-value=6.9e+02 Score=24.33 Aligned_cols=90 Identities=14% Similarity=0.271 Sum_probs=57.5
Q ss_pred CCeEEE-Eec---cHHHhhhccccceeeeccCch-----hHHHHHhcCCcEEeccCccccchhHHHHHhhhceEEEeeec
Q 045570 338 GRGMIW-GWV---PQVEILAHKAIGGFVSHCGWN-----SILESLWYGVPIATWPIYAEQQLNAFRMVKELGLALDLRLD 408 (468)
Q Consensus 338 ~~~~v~-~~v---pq~~iL~~~~~~~~i~HgG~~-----s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~G~G~~~~~~ 408 (468)
.++.+. .|+ ++..+|+.+|+|..+|-.-.| -|..-.=+|+|++.+-+- --..+++.---|....
T Consensus 318 ~~v~~~tpWL~aEDYP~ll~saDlGVcLHtSSSGLDLPMKVVDMFGcglPvcA~~fk-----cl~ELVkh~eNGlvF~-- 390 (444)
T KOG2941|consen 318 QHVQVCTPWLEAEDYPKLLASADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVNFK-----CLDELVKHGENGLVFE-- 390 (444)
T ss_pred cceeeeecccccccchhHhhccccceEeeecCcccCcchhHHHhhcCCCceeeecch-----hHHHHHhcCCCceEec--
Confidence 456665 886 477799999998888876655 355666677887776442 2223444413344433
Q ss_pred cccCCcccChhHHHHHHHHHhcC---c----HHHHHHHHHH
Q 045570 409 YRVGSDLVMAGDIESAVRCLMDG---E----NKIRKKVKEM 442 (468)
Q Consensus 409 ~~~~~~~~~~~~l~~av~~vl~~---~----~~~~~~a~~l 442 (468)
+.++|.+.+..+++| | .++|+|+++-
T Consensus 391 --------Ds~eLa~ql~~lf~~fp~~a~~l~~lkkn~~e~ 423 (444)
T KOG2941|consen 391 --------DSEELAEQLQMLFKNFPDNADELNQLKKNLREE 423 (444)
T ss_pred --------cHHHHHHHHHHHHhcCCCCHHHHHHHHHhhHHH
Confidence 678899999888873 1 1556665553
No 268
>PRK06732 phosphopantothenate--cysteine ligase; Validated
Probab=23.61 E-value=95 Score=28.01 Aligned_cols=36 Identities=14% Similarity=0.190 Sum_probs=26.2
Q ss_pred EEEEEcCCCCCChHHH------------HHHHHHHHhCCCCeEEEEEecC
Q 045570 5 ELIFVPSPGIGHLVST------------LEFAKHLTDRDDRISVTILSMK 42 (468)
Q Consensus 5 ~i~~~~~p~~GH~~P~------------l~La~~L~~rGH~~~Vt~~~~~ 42 (468)
||++...|++=.+.|. .+||++|.++||+ |+++...
T Consensus 2 ~vliT~G~T~e~iD~VR~itN~SSG~iG~aLA~~L~~~G~~--V~li~r~ 49 (229)
T PRK06732 2 KILITSGGTTEPIDSVRGITNHSTGQLGKIIAETFLAAGHE--VTLVTTK 49 (229)
T ss_pred EEEEcCCCcccccCCceeecCccchHHHHHHHHHHHhCCCE--EEEEECc
Confidence 4666666666666553 5788999999988 8888743
No 269
>PRK14569 D-alanyl-alanine synthetase A; Provisional
Probab=23.49 E-value=1.4e+02 Score=28.06 Aligned_cols=38 Identities=13% Similarity=0.098 Sum_probs=29.0
Q ss_pred CCCcEEEEEcCCCCCC----hHHHHHHHHHHHhCCCCeEEEEEe
Q 045570 1 MKKAELIFVPSPGIGH----LVSTLEFAKHLTDRDDRISVTILS 40 (468)
Q Consensus 1 m~k~~i~~~~~p~~GH----~~P~l~La~~L~~rGH~~~Vt~~~ 40 (468)
|+|+||+++..+...- +.-.-+++++|.+.||+ |..+.
T Consensus 1 ~~~~~i~vl~gg~s~e~~vsl~s~~~v~~aL~~~g~~--~~~~~ 42 (296)
T PRK14569 1 MKNEKIVVLYGGDSPEREVSLKSGKAVLDSLISQGYD--AVGVD 42 (296)
T ss_pred CCCcEEEEEeCCCCCchHhHHHHHHHHHHHHHHcCCE--EEEEc
Confidence 8889999988764442 46667899999999988 65553
No 270
>cd01968 Nitrogenase_NifE_I Nitrogenase_NifE_I: a subgroup of the NifE subunit of the NifEN complex: NifE forms an alpha2beta2 tetramer with NifN. NifE and NifN are structurally homologous to nitrogenase MoFe protein alpha and beta subunits respectively. NifEN participates in the synthesis of the iron-molybdenum cofactor (FeMoco) of the MoFe protein. NifB-co (an iron and sulfur containing precursor of the FeMoco) from NifB is transferred to the NifEN complex where it is further processed to FeMoco. The NifEN bound precursor of FeMoco has been identified as a molybdenum-free, iron- and sulfur- containing analog of FeMoco. It has been suggested that this NifEN bound precursor also acts as a cofactor precursor in nitrogenase systems which require a cofactor other than FeMoco: i.e. iron-vanadium cofactor (FeVco) or iron only cofactor (FeFeco).
Probab=23.37 E-value=6.8e+02 Score=24.81 Aligned_cols=24 Identities=21% Similarity=0.016 Sum_probs=19.3
Q ss_pred CccEEEEcCCcchHHHHHHHcCCCeEE
Q 045570 112 QVTGLVLDFFCVSMVDIAKELSLPSYM 138 (468)
Q Consensus 112 ~~D~vv~D~~~~~~~~~A~~lgiP~v~ 138 (468)
+||+++.... ...+|+++|+|++.
T Consensus 356 ~pDl~ig~s~---~~~~a~~~gip~~~ 379 (410)
T cd01968 356 KADLLVAGGK---ERYLALKLGIPFCD 379 (410)
T ss_pred CCCEEEECCc---chhhHHhcCCCEEE
Confidence 7999998853 35678999999774
No 271
>TIGR03087 stp1 sugar transferase, PEP-CTERM/EpsH1 system associated. Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.
Probab=23.20 E-value=1.2e+02 Score=29.91 Aligned_cols=28 Identities=25% Similarity=0.526 Sum_probs=22.9
Q ss_pred CCCCChHHHHHHHHHHHhCCCCeEEEEEecC
Q 045570 12 PGIGHLVSTLEFAKHLTDRDDRISVTILSMK 42 (468)
Q Consensus 12 p~~GH~~P~l~La~~L~~rGH~~~Vt~~~~~ 42 (468)
|-.|+-.=...++++|+++ |+ |++++-.
T Consensus 12 ~~~G~~~r~~~~~~~L~~~-~~--v~l~~~~ 39 (397)
T TIGR03087 12 PNKGDKIRSFHLLRHLAAR-HR--VHLGTFV 39 (397)
T ss_pred CCCCCcEeHHHHHHHHHhc-Cc--EEEEEeC
Confidence 3678889999999999776 78 8888754
No 272
>PRK05282 (alpha)-aspartyl dipeptidase; Validated
Probab=23.19 E-value=5.7e+02 Score=23.18 Aligned_cols=47 Identities=15% Similarity=0.079 Sum_probs=32.1
Q ss_pred HhHHHHhhhcCCCCcEEEEeccCccccCHHHHHHHHHHHHhCCCcEEEE
Q 045570 258 YQKIFQWLDDLAESSVVFLCFGSSGSFDVAQVKEIAIGLERSGYNFLWS 306 (468)
Q Consensus 258 ~~~~~~~l~~~~~~~vv~vs~GS~~~~~~~~~~~~~~al~~~~~~~iw~ 306 (468)
.+.+.+|+.+ .+.++||-..|......+-+...-+++++.+..+...
T Consensus 21 ~~~~~~~~~~--~~~v~fIPtAs~~~~~~~y~~~~~~af~~lG~~v~~l 67 (233)
T PRK05282 21 LPLIAELLAG--RRKAVFIPYAGVTQSWDDYTAKVAEALAPLGIEVTGI 67 (233)
T ss_pred HHHHHHHHcC--CCeEEEECCCCCCCCHHHHHHHHHHHHHHCCCEEEEe
Confidence 4456666663 2349999988866444455777889999988875544
No 273
>cd03466 Nitrogenase_NifN_2 Nitrogenase_nifN_2: A subgroup of the NifN subunit of the NifEN complex: NifN forms an alpha2beta2 tetramer with NifE. NifN and nifE are structurally homologous to nitrogenase MoFe protein beta and alpha subunits respectively. NifEN participates in the synthesis of the iron-molybdenum cofactor (FeMoco) of the MoFe protein. NifB-co (an iron and sulfur containing precursor of the FeMoco) from NifB is transferred to the NifEN complex where it is further processed to FeMoco. The nifEN bound precursor of FeMoco has been identified as a molybdenum-free, iron- and sulfur- containing analog of FeMoco. It has been suggested that this nifEN bound precursor also acts as a cofactor precursor in nitrogenase systems which require a cofactor other than FeMoco: i.e. iron-vanadium cofactor (FeVco) or iron only cofactor (FeFeco). This group also contains the Clostidium fused NifN-NifB protein.
Probab=22.98 E-value=6.9e+02 Score=24.97 Aligned_cols=25 Identities=20% Similarity=0.305 Sum_probs=20.9
Q ss_pred CccEEEEcCCcchHHHHHHHcCCCeEEE
Q 045570 112 QVTGLVLDFFCVSMVDIAKELSLPSYMF 139 (468)
Q Consensus 112 ~~D~vv~D~~~~~~~~~A~~lgiP~v~~ 139 (468)
++|++|.+.. ...+|+++|+|++..
T Consensus 372 ~~dliiG~s~---~~~~a~~~~ip~~~~ 396 (429)
T cd03466 372 KIDVLIGNSY---GRRIAEKLGIPLIRI 396 (429)
T ss_pred CCCEEEECch---hHHHHHHcCCCEEEe
Confidence 8999999884 467899999998753
No 274
>COG1484 DnaC DNA replication protein [DNA replication, recombination, and repair]
Probab=22.98 E-value=1.1e+02 Score=28.09 Aligned_cols=37 Identities=16% Similarity=0.367 Sum_probs=32.9
Q ss_pred cEEEEEcCCCCCChHHHHHHHHHHHhCCCCeEEEEEecC
Q 045570 4 AELIFVPSPGIGHLVSTLEFAKHLTDRDDRISVTILSMK 42 (468)
Q Consensus 4 ~~i~~~~~p~~GH~~P~l~La~~L~~rGH~~~Vt~~~~~ 42 (468)
.-++|+-.|+.|-.+=..+++.+|..+|+. |+|++.+
T Consensus 106 ~nl~l~G~~G~GKThLa~Ai~~~l~~~g~s--v~f~~~~ 142 (254)
T COG1484 106 ENLVLLGPPGVGKTHLAIAIGNELLKAGIS--VLFITAP 142 (254)
T ss_pred CcEEEECCCCCcHHHHHHHHHHHHHHcCCe--EEEEEHH
Confidence 358889999999999999999999988966 9999976
No 275
>PF08323 Glyco_transf_5: Starch synthase catalytic domain; InterPro: IPR013534 This region represents the catalytic domain of glycogen (or starch) synthases that use ADP-glucose (2.4.1.21 from EC), rather than UDP-glucose (2.4.1.11 from EC) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate.; PDB: 2BIS_C 3L01_A 3FRO_A 2R4U_A 2R4T_A 3D1J_A 3COP_A 3GUH_A 2QZS_A 3CX4_A ....
Probab=22.83 E-value=64 Score=29.48 Aligned_cols=21 Identities=19% Similarity=0.252 Sum_probs=16.6
Q ss_pred HHHHHHHHHhCCCCeEEEEEecC
Q 045570 20 TLEFAKHLTDRDDRISVTILSMK 42 (468)
Q Consensus 20 ~l~La~~L~~rGH~~~Vt~~~~~ 42 (468)
.-.|+++|+++||+ |++++|.
T Consensus 22 ~~~L~kaL~~~G~~--V~Vi~P~ 42 (245)
T PF08323_consen 22 VGSLPKALAKQGHD--VRVIMPK 42 (245)
T ss_dssp HHHHHHHHHHTT-E--EEEEEE-
T ss_pred HHHHHHHHHhcCCe--EEEEEcc
Confidence 45788999999998 9999985
No 276
>cd02071 MM_CoA_mut_B12_BD methylmalonyl CoA mutase B12 binding domain. This domain binds to B12 (adenosylcobamide), which initiates the conversion of succinyl CoA and methylmalonyl CoA by forming an adenosyl radical, which then undergoes a rearrangement exchanging a hydrogen atom with a group attached to a neighboring carbon atom. This family is present in both mammals and bacteria. Bacterial members are heterodimers and involved in the fermentation of pyruvate to propionate. Mammalian members are homodimers and responsible for the conversion of odd-chain fatty acids and branched-chain amino acids via propionyl CoA to succinyl CoA for further degradation.
Probab=22.81 E-value=1.2e+02 Score=24.12 Aligned_cols=36 Identities=17% Similarity=0.147 Sum_probs=32.1
Q ss_pred EEEEEcCCCCCChHHHHHHHHHHHhCCCCeEEEEEecC
Q 045570 5 ELIFVPSPGIGHLVSTLEFAKHLTDRDDRISVTILSMK 42 (468)
Q Consensus 5 ~i~~~~~p~~GH~~P~l~La~~L~~rGH~~~Vt~~~~~ 42 (468)
||++.+.++-.|-.-..-++.-|..+|.+ |..+.+.
T Consensus 1 ~vv~~~~~gd~H~lG~~~~~~~l~~~G~~--vi~lG~~ 36 (122)
T cd02071 1 RILVAKPGLDGHDRGAKVIARALRDAGFE--VIYTGLR 36 (122)
T ss_pred CEEEEecCCChhHHHHHHHHHHHHHCCCE--EEECCCC
Confidence 58999999999999999999999999966 8887764
No 277
>PRK07773 replicative DNA helicase; Validated
Probab=22.79 E-value=4.1e+02 Score=29.59 Aligned_cols=37 Identities=27% Similarity=0.495 Sum_probs=30.1
Q ss_pred EEEEcCCCCCChHHHHHHHHHHHhC-CCCeEEEEEecCCC
Q 045570 6 LIFVPSPGIGHLVSTLEFAKHLTDR-DDRISVTILSMKLA 44 (468)
Q Consensus 6 i~~~~~p~~GH~~P~l~La~~L~~r-GH~~~Vt~~~~~~~ 44 (468)
|++..-|+.|-..-.+.+|...+.+ |.. |.+++-+-.
T Consensus 220 ivIagrPg~GKT~fal~ia~~~a~~~~~~--V~~fSlEms 257 (886)
T PRK07773 220 IIVAARPSMGKTTFGLDFARNCAIRHRLA--VAIFSLEMS 257 (886)
T ss_pred EEEEeCCCCCcHHHHHHHHHHHHHhcCCe--EEEEecCCC
Confidence 7788889999999999999998754 644 888887633
No 278
>PRK01175 phosphoribosylformylglycinamidine synthase I; Provisional
Probab=22.77 E-value=1.8e+02 Score=26.87 Aligned_cols=36 Identities=11% Similarity=0.067 Sum_probs=28.0
Q ss_pred CCCcEEEEEcCCCCCChHHHHHHHHHHHhCCCCeEEEEEec
Q 045570 1 MKKAELIFVPSPGIGHLVSTLEFAKHLTDRDDRISVTILSM 41 (468)
Q Consensus 1 m~k~~i~~~~~p~~GH~~P~l~La~~L~~rGH~~~Vt~~~~ 41 (468)
|.++||+++.+|+...-. ....+|.++|.+ +.++..
T Consensus 1 ~~~~kvaVl~~pG~n~d~---e~~~Al~~aG~~--v~~v~~ 36 (261)
T PRK01175 1 MESIRVAVLRMEGTNCED---ETVKAFRRLGVE--PEYVHI 36 (261)
T ss_pred CCCCEEEEEeCCCCCCHH---HHHHHHHHCCCc--EEEEee
Confidence 677899999999887554 557888889977 666654
No 279
>KOG3062 consensus RNA polymerase II elongator associated protein [General function prediction only]
Probab=22.67 E-value=1.8e+02 Score=26.32 Aligned_cols=38 Identities=21% Similarity=0.345 Sum_probs=32.0
Q ss_pred EEEEEcCCCCCChHHHHHHHHHHHhCCCCeEEEEEecC
Q 045570 5 ELIFVPSPGIGHLVSTLEFAKHLTDRDDRISVTILSMK 42 (468)
Q Consensus 5 ~i~~~~~p~~GH~~P~l~La~~L~~rGH~~~Vt~~~~~ 42 (468)
-|+|.-.|..|...-...|.++|.++||...|+++.-+
T Consensus 3 LVvi~G~P~SGKstrA~~L~~~l~~~~~K~~v~ii~de 40 (281)
T KOG3062|consen 3 LVVICGLPCSGKSTRAVELREALKERGTKQSVRIIDDE 40 (281)
T ss_pred eEEEeCCCCCCchhHHHHHHHHHHhhcccceEEEechh
Confidence 38899999999999999999999999987556555543
No 280
>COG2210 Peroxiredoxin family protein [General function prediction only]
Probab=22.64 E-value=1.6e+02 Score=24.10 Aligned_cols=39 Identities=21% Similarity=0.139 Sum_probs=31.1
Q ss_pred CCCcEEEEEcCCCCCChHHHHHHHHHHHhCCCCeEEEEEec
Q 045570 1 MKKAELIFVPSPGIGHLVSTLEFAKHLTDRDDRISVTILSM 41 (468)
Q Consensus 1 m~k~~i~~~~~p~~GH~~P~l~La~~L~~rGH~~~Vt~~~~ 41 (468)
|.++--.++..+..--+.|..-++...+++|++ |++..+
T Consensus 1 ~~~k~~IIl~SG~~dk~~~a~iias~A~A~G~E--V~VF~T 39 (137)
T COG2210 1 MDKKLGIILASGTLDKAYAALIIASGAAAMGYE--VTVFFT 39 (137)
T ss_pred CCceEEEEEeCCCHHHHHHHHHHHHHHHHcCCe--EEEEEe
Confidence 344445667778888999999999999999988 777665
No 281
>PRK05636 replicative DNA helicase; Provisional
Probab=22.40 E-value=1.5e+02 Score=30.38 Aligned_cols=36 Identities=22% Similarity=0.521 Sum_probs=28.9
Q ss_pred EEEEEcCCCCCChHHHHHHHHHHH-hCCCCeEEEEEecC
Q 045570 5 ELIFVPSPGIGHLVSTLEFAKHLT-DRDDRISVTILSMK 42 (468)
Q Consensus 5 ~i~~~~~p~~GH~~P~l~La~~L~-~rGH~~~Vt~~~~~ 42 (468)
-|++...|+.|-..=.+.+|...+ +.|.. |.+++.+
T Consensus 267 Liiiaarpg~GKT~~al~~a~~~a~~~g~~--v~~fSlE 303 (505)
T PRK05636 267 MIIVAARPGVGKSTLALDFMRSASIKHNKA--SVIFSLE 303 (505)
T ss_pred eEEEEeCCCCCHHHHHHHHHHHHHHhCCCe--EEEEEee
Confidence 367888999999999999998876 45655 8788776
No 282
>PRK07952 DNA replication protein DnaC; Validated
Probab=22.38 E-value=4e+02 Score=24.34 Aligned_cols=35 Identities=26% Similarity=0.404 Sum_probs=26.5
Q ss_pred EEEEEcCCCCCChHHHHHHHHHHHhCCCCeEEEEEec
Q 045570 5 ELIFVPSPGIGHLVSTLEFAKHLTDRDDRISVTILSM 41 (468)
Q Consensus 5 ~i~~~~~p~~GH~~P~l~La~~L~~rGH~~~Vt~~~~ 41 (468)
-+++.-.++.|-.+=..++|.+|..+|+. |.+++.
T Consensus 101 ~~~l~G~~GtGKThLa~aia~~l~~~g~~--v~~it~ 135 (244)
T PRK07952 101 SFIFSGKPGTGKNHLAAAICNELLLRGKS--VLIITV 135 (244)
T ss_pred eEEEECCCCCCHHHHHHHHHHHHHhcCCe--EEEEEH
Confidence 36667777888888888888888888866 766654
No 283
>PRK13604 luxD acyl transferase; Provisional
Probab=22.25 E-value=1.5e+02 Score=28.14 Aligned_cols=30 Identities=13% Similarity=0.050 Sum_probs=25.4
Q ss_pred cEEEEEcCCCCCChHHHHHHHHHHHhCCCC
Q 045570 4 AELIFVPSPGIGHLVSTLEFAKHLTDRDDR 33 (468)
Q Consensus 4 ~~i~~~~~p~~GH~~P~l~La~~L~~rGH~ 33 (468)
...+++.++..++-.-+..+|+.|+++|..
T Consensus 37 ~~~vIi~HGf~~~~~~~~~~A~~La~~G~~ 66 (307)
T PRK13604 37 NNTILIASGFARRMDHFAGLAEYLSSNGFH 66 (307)
T ss_pred CCEEEEeCCCCCChHHHHHHHHHHHHCCCE
Confidence 357888888888877799999999999944
No 284
>PF02585 PIG-L: GlcNAc-PI de-N-acetylase; InterPro: IPR003737 A number of the members of this family have been characterised as a probable N-acetylglucosaminyl-phosphatidylinositol de-N-acetylase, (3.5.1.89 from EC) that catalyses the second step in glycosylphosphatidylinositol (GPI) biosynthesis [, ]. The family also includes a number of thiol biosynthesis proteins. ; PDB: 2XAD_C 2X9L_A 3DFK_A 3DFM_A 3DFF_A 2IXD_A 1UAN_A 1Q74_B 1Q7T_B 3DFI_A.
Probab=22.19 E-value=2.3e+02 Score=22.48 Aligned_cols=20 Identities=20% Similarity=0.263 Sum_probs=11.8
Q ss_pred HHHHHHHhCCCCeEEEEEec
Q 045570 22 EFAKHLTDRDDRISVTILSM 41 (468)
Q Consensus 22 ~La~~L~~rGH~~~Vt~~~~ 41 (468)
.+...+.++|+++.|.++|.
T Consensus 16 g~i~~~~~~g~~v~vv~~t~ 35 (128)
T PF02585_consen 16 GTIAKLAEAGHRVVVVTLTD 35 (128)
T ss_dssp HHHHHHHHTT-EEEEEECE-
T ss_pred HHHHHHHhcCCeEEEEEecc
Confidence 44567888898855555554
No 285
>PRK04885 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=22.06 E-value=78 Score=29.34 Aligned_cols=28 Identities=18% Similarity=0.159 Sum_probs=23.4
Q ss_pred ccccceeeeccCchhHHHHHh------cCCcEEecc
Q 045570 354 HKAIGGFVSHCGWNSILESLW------YGVPIATWP 383 (468)
Q Consensus 354 ~~~~~~~i~HgG~~s~~eal~------~GvP~v~~P 383 (468)
.+++ +|+-||-||++.+++ .++|++++-
T Consensus 35 ~~Dl--vi~iGGDGT~L~a~~~~~~~~~~iPilGIN 68 (265)
T PRK04885 35 NPDI--VISVGGDGTLLSAFHRYENQLDKVRFVGVH 68 (265)
T ss_pred CCCE--EEEECCcHHHHHHHHHhcccCCCCeEEEEe
Confidence 4566 999999999999986 488988874
No 286
>cd07037 TPP_PYR_MenD Pyrimidine (PYR) binding domain of 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexadiene-1-carboxylate synthase (MenD) and related proteins. Thiamine pyrophosphate (TPP family), pyrimidine (PYR) binding domain of 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexadiene-1-carboxylate (SEPHCHC) synthase (MenD) subfamily. The PYR domain is found in many key metabolic enzymes which use TPP (also known as thiamine diphosphate) as a cofactor. TPP binds in the cleft formed by a PYR domain and a PP domain. The PYR domain, binds the aminopyrimidine ring of TPP, the PP domain binds the diphosphate residue. The PYR and PP domains have a common fold, but do not share strong sequence conservation. The PP domain is not included in this sub-family. Most TPP-dependent enzymes have the PYR and PP domains on the same subunit although these domains can be alternatively arranged in the primary structure. TPP-dependent enzymes are multisubunit proteins, the smallest catalytic unit being a dim
Probab=22.02 E-value=76 Score=26.89 Aligned_cols=25 Identities=24% Similarity=0.510 Sum_probs=20.9
Q ss_pred eeeeccCch------hHHHHHhcCCcEEecc
Q 045570 359 GFVSHCGWN------SILESLWYGVPIATWP 383 (468)
Q Consensus 359 ~~i~HgG~~------s~~eal~~GvP~v~~P 383 (468)
++++|+|-| ++.||...++|||++.
T Consensus 63 v~~~t~GpG~~n~~~gl~~A~~~~~Pvl~i~ 93 (162)
T cd07037 63 AVVCTSGTAVANLLPAVVEAYYSGVPLLVLT 93 (162)
T ss_pred EEEECCchHHHHHhHHHHHHHhcCCCEEEEE
Confidence 388888854 7789999999999994
No 287
>PF02016 Peptidase_S66: LD-carboxypeptidase; InterPro: IPR003507 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This signature is found in the Escherichia coli microcin C7 self-immunity protein mccF and in muramoyltetrapeptide carboxypeptidase (3.4.17.13 from EC, LD-carboxypeptidase A). LD-carboxypeptidase A belongs to MEROPS peptidase family S66 (clan SS). The entry also contains uncharacterised proteins including hypothetical proteins from various bacteria archaea.; PDB: 1ZRS_A 1ZL0_B 2AUM_B 2AUN_B 3TLG_A 3TLC_A 3TLZ_B 3TLY_B 3TLE_A 3TLB_B ....
Probab=22.00 E-value=64 Score=30.26 Aligned_cols=28 Identities=11% Similarity=0.292 Sum_probs=21.2
Q ss_pred ccCHHHHHHHHHHHHhCCCcEEEEEecC
Q 045570 283 SFDVAQVKEIAIGLERSGYNFLWSLRVS 310 (468)
Q Consensus 283 ~~~~~~~~~~~~al~~~~~~~iw~~~~~ 310 (468)
..+.+....+.+++.+..++.||.++++
T Consensus 45 gs~~~Ra~dL~~a~~d~~i~aI~~~rGG 72 (284)
T PF02016_consen 45 GSDEERAEDLNEAFADPEIDAIWCARGG 72 (284)
T ss_dssp S-HHHHHHHHHHHHHSTTEEEEEES--S
T ss_pred CCHHHHHHHHHHHhcCCCCCEEEEeecc
Confidence 3345668889999999999999998876
No 288
>PRK05647 purN phosphoribosylglycinamide formyltransferase; Reviewed
Probab=21.59 E-value=5.6e+02 Score=22.51 Aligned_cols=36 Identities=11% Similarity=0.100 Sum_probs=21.6
Q ss_pred CCCcEEEEEcCCCCCChHHHHHHHHHHHhCCCCeEEEEEec
Q 045570 1 MKKAELIFVPSPGIGHLVSTLEFAKHLTDRDDRISVTILSM 41 (468)
Q Consensus 1 m~k~~i~~~~~p~~GH~~P~l~La~~L~~rGH~~~Vt~~~~ 41 (468)
|+ ||+++..+..+-+. +|.+++.+.+...+|.++.+
T Consensus 1 m~--ki~vl~sg~gs~~~---~ll~~~~~~~~~~~I~~vvs 36 (200)
T PRK05647 1 MK--RIVVLASGNGSNLQ---AIIDACAAGQLPAEIVAVIS 36 (200)
T ss_pred Cc--eEEEEEcCCChhHH---HHHHHHHcCCCCcEEEEEEe
Confidence 64 49999887744444 55566766543333666544
No 289
>PF08897 DUF1841: Domain of unknown function (DUF1841); InterPro: IPR014993 This group of proteins are functionally uncharacterised.
Probab=21.59 E-value=64 Score=26.36 Aligned_cols=19 Identities=32% Similarity=0.398 Sum_probs=16.4
Q ss_pred CCCCCChHHHHHHHHHHHh
Q 045570 11 SPGIGHLVSTLEFAKHLTD 29 (468)
Q Consensus 11 ~p~~GH~~P~l~La~~L~~ 29 (468)
.|..|-+|||+.|+-+|+=
T Consensus 56 ~pe~G~tNPFLHlsmHLsI 74 (137)
T PF08897_consen 56 SPEQGETNPFLHLSMHLSI 74 (137)
T ss_pred CcccCccchhHHHHHHHHH
Confidence 3678999999999999974
No 290
>COG4088 Predicted nucleotide kinase [Nucleotide transport and metabolism]
Probab=21.46 E-value=1.2e+02 Score=27.04 Aligned_cols=34 Identities=32% Similarity=0.346 Sum_probs=29.5
Q ss_pred EEEEcCCCCCChHHHHHHHHHHHhCCCCeEEEEEec
Q 045570 6 LIFVPSPGIGHLVSTLEFAKHLTDRDDRISVTILSM 41 (468)
Q Consensus 6 i~~~~~p~~GH~~P~l~La~~L~~rGH~~~Vt~~~~ 41 (468)
|.+.-.|+.|...-.-.||++|..++|+ |..++.
T Consensus 4 iIlTGyPgsGKTtfakeLak~L~~~i~~--vi~l~k 37 (261)
T COG4088 4 IILTGYPGSGKTTFAKELAKELRQEIWR--VIHLEK 37 (261)
T ss_pred EEEecCCCCCchHHHHHHHHHHHHhhhh--ccccch
Confidence 7778889999999999999999999998 555543
No 291
>cd01977 Nitrogenase_VFe_alpha Nitrogenase_VFe_alpha -like: Nitrogenase VFe protein, alpha subunit like. This group contains proteins similar to the alpha subunits of, the VFe protein of the vanadium-dependent (V-) nitrogenase and the FeFe protein of the iron only (Fe-) nitrogenase Nitrogenase catalyzes the ATP-dependent reduction of dinitrogen (N2) to ammonia. In addition to V- and Fe- nitrogenases there is a molybdenum (Mo)-dependent nitrogenase which is the most widespread and best characterized of these systems. These systems consist of component 1 (VFe protein, FeFe protein or, MoFe protein respectively) and, component 2 (Fe protein). MoFe is an alpha2beta2 tetramer, V-and Fe- nitrogenases are alpha2beta2delta2 hexamers. The alpha and beta subunits of VFe and FeFe are similar to the alpha and beta subunits of MoFe. For MoFe each alphabeta pair contains one P-cluster (at the alphabeta interface) and, one molecule of iron molybdenum cofactor (FeMoco) contained within the alpha sub
Probab=21.40 E-value=6.5e+02 Score=24.99 Aligned_cols=25 Identities=12% Similarity=0.099 Sum_probs=19.8
Q ss_pred CccEEEEcCCcchHHHHHHHcCCCeEEE
Q 045570 112 QVTGLVLDFFCVSMVDIAKELSLPSYMF 139 (468)
Q Consensus 112 ~~D~vv~D~~~~~~~~~A~~lgiP~v~~ 139 (468)
+||+||..... ..+|+++|||++..
T Consensus 358 ~pdliig~s~~---~~~a~~lgip~~~~ 382 (415)
T cd01977 358 KPDIILTGPRV---GELVKKLHVPYVNI 382 (415)
T ss_pred CCCEEEecCcc---chhhhhcCCCEEec
Confidence 89999987743 35799999998764
No 292
>PLN02935 Bifunctional NADH kinase/NAD(+) kinase
Probab=21.28 E-value=1.3e+02 Score=30.61 Aligned_cols=54 Identities=9% Similarity=0.201 Sum_probs=38.3
Q ss_pred hccccceeeeccCchhHHHHHhc----CCcEEeccCccccchhHHHHHhhhceEEEeeeccccCCcccChhHHHHHHHHH
Q 045570 353 AHKAIGGFVSHCGWNSILESLWY----GVPIATWPIYAEQQLNAFRMVKELGLALDLRLDYRVGSDLVMAGDIESAVRCL 428 (468)
Q Consensus 353 ~~~~~~~~i~HgG~~s~~eal~~----GvP~v~~P~~~DQ~~na~~~~~~~G~G~~~~~~~~~~~~~~~~~~l~~av~~v 428 (468)
..+++ +|+=||-||++.+.+. ++|++.+ |.- .+|. +. .++.+++.++|.++
T Consensus 261 ~~~Dl--VIsiGGDGTlL~Aar~~~~~~iPILGI--------N~G------~LGF-Lt--------~i~~~e~~~~Le~i 315 (508)
T PLN02935 261 TKVDL--VITLGGDGTVLWAASMFKGPVPPVVPF--------SMG------SLGF-MT--------PFHSEQYRDCLDAI 315 (508)
T ss_pred cCCCE--EEEECCcHHHHHHHHHhccCCCcEEEE--------eCC------Ccce-ec--------ccCHHHHHHHHHHH
Confidence 35677 9999999999999774 5677665 211 2343 22 55788899999998
Q ss_pred hcC
Q 045570 429 MDG 431 (468)
Q Consensus 429 l~~ 431 (468)
+++
T Consensus 316 l~G 318 (508)
T PLN02935 316 LKG 318 (508)
T ss_pred HcC
Confidence 874
No 293
>TIGR01498 folK 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase. This model describes the folate biosynthesis enzyme 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase. Alternate names include 6-hydroxymethyl-7,8-dihydropterin diphosphokinase and 7,8-dihydro-6-hydroxymethylpterin pyrophosphokinase (HPPK). The extreme C-terminal region, of typically eight to thirty residues, is not included in the model. This enzyme may be found as a fusion protein with other enzymes of folate biosynthesis.
Probab=21.15 E-value=94 Score=25.13 Aligned_cols=29 Identities=10% Similarity=0.170 Sum_probs=20.8
Q ss_pred EEEeccCccccCHHHHHHHHHHHHhCCCc
Q 045570 274 VFLCFGSSGSFDVAQVKEIAIGLERSGYN 302 (468)
Q Consensus 274 v~vs~GS~~~~~~~~~~~~~~al~~~~~~ 302 (468)
+|+++||......+.++..+..|.+.+..
T Consensus 1 ~~i~lGSN~g~~~~~l~~A~~~L~~~~~~ 29 (127)
T TIGR01498 1 AYIALGSNLGDRLKNLRAALAALAALPVR 29 (127)
T ss_pred CEEEEeCCcHhHHHHHHHHHHHHhcCCcc
Confidence 58999997765556677777777765533
No 294
>KOG3339 consensus Predicted glycosyltransferase [General function prediction only]
Probab=20.95 E-value=3.1e+02 Score=23.81 Aligned_cols=25 Identities=24% Similarity=0.173 Sum_probs=21.3
Q ss_pred EEEEcCCCCCChHHHHHHHHHHHhC
Q 045570 6 LIFVPSPGIGHLVSTLEFAKHLTDR 30 (468)
Q Consensus 6 i~~~~~p~~GH~~P~l~La~~L~~r 30 (468)
=.++-.++.||..=|+.|-++|.++
T Consensus 40 ~~lVvlGSGGHT~EMlrLl~~l~~~ 64 (211)
T KOG3339|consen 40 STLVVLGSGGHTGEMLRLLEALQDL 64 (211)
T ss_pred eEEEEEcCCCcHHHHHHHHHHHHhh
Confidence 4566678999999999999999775
No 295
>TIGR01283 nifE nitrogenase molybdenum-iron cofactor biosynthesis protein NifE. This protein is part of the NifEN complex involved in biosynthesis of the molybdenum-iron cofactor used by the homologous NifDK complex of nitrogenase. In a few species, the protein is found as a NifEN fusion protein.
Probab=20.84 E-value=8.7e+02 Score=24.48 Aligned_cols=25 Identities=16% Similarity=0.025 Sum_probs=19.6
Q ss_pred CccEEEEcCCcchHHHHHHHcCCCeEEE
Q 045570 112 QVTGLVLDFFCVSMVDIAKELSLPSYMF 139 (468)
Q Consensus 112 ~~D~vv~D~~~~~~~~~A~~lgiP~v~~ 139 (468)
+||++|... ....+|.++|+|++.+
T Consensus 395 ~pDl~ig~~---~~~~~a~k~giP~i~~ 419 (456)
T TIGR01283 395 KADLLIAGG---KERYTALKLGIPFCDI 419 (456)
T ss_pred CCCEEEEcc---chHHHHHhcCCCEEEc
Confidence 899999764 4466788999998753
No 296
>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional
Probab=20.70 E-value=5.4e+02 Score=24.82 Aligned_cols=34 Identities=18% Similarity=0.233 Sum_probs=25.1
Q ss_pred CCcEEEEEcCCCCCChHHHHHHHHHHHhCCCCeEEEEEec
Q 045570 2 KKAELIFVPSPGIGHLVSTLEFAKHLTDRDDRISVTILSM 41 (468)
Q Consensus 2 ~k~~i~~~~~p~~GH~~P~l~La~~L~~rGH~~~Vt~~~~ 41 (468)
++.||+++-.++.| -.+|+.|++.|+. +++++-.
T Consensus 23 ~~~~VlIiG~GglG-----s~va~~La~aGvg-~i~lvD~ 56 (338)
T PRK12475 23 REKHVLIVGAGALG-----AANAEALVRAGIG-KLTIADR 56 (338)
T ss_pred cCCcEEEECCCHHH-----HHHHHHHHHcCCC-EEEEEcC
Confidence 45678998888777 6789999999964 2555543
No 297
>cd02069 methionine_synthase_B12_BD B12 binding domain of methionine synthase. This domain binds methylcobalamin, which it uses as an intermediate methyl carrier from methyltetrahydrofolate (CH3H4folate) to homocysteine (Hcy).
Probab=20.49 E-value=1.6e+02 Score=26.18 Aligned_cols=38 Identities=16% Similarity=0.149 Sum_probs=34.0
Q ss_pred CcEEEEEcCCCCCChHHHHHHHHHHHhCCCCeEEEEEecC
Q 045570 3 KAELIFVPSPGIGHLVSTLEFAKHLTDRDDRISVTILSMK 42 (468)
Q Consensus 3 k~~i~~~~~p~~GH~~P~l~La~~L~~rGH~~~Vt~~~~~ 42 (468)
+.+|++.+.++-.|-....=++..|..+|.+ |..+...
T Consensus 88 ~~~vvl~t~~gd~HdiG~~iv~~~l~~~G~~--Vi~LG~~ 125 (213)
T cd02069 88 KGKIVLATVKGDVHDIGKNLVGVILSNNGYE--VIDLGVM 125 (213)
T ss_pred CCeEEEEeCCCchhHHHHHHHHHHHHhCCCE--EEECCCC
Confidence 5689999999999999999999999999966 8888764
No 298
>cd01832 SGNH_hydrolase_like_1 Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxlic acid. Myxobacterial members of this subfamily have been reported to be involved in adventurous gliding motility.
Probab=20.20 E-value=3.2e+02 Score=23.08 Aligned_cols=36 Identities=22% Similarity=0.208 Sum_probs=25.1
Q ss_pred EEEEeccCcccc----C----HHHHHHHHHHHHhCCCcEEEEEe
Q 045570 273 VVFLCFGSSGSF----D----VAQVKEIAIGLERSGYNFLWSLR 308 (468)
Q Consensus 273 vv~vs~GS~~~~----~----~~~~~~~~~al~~~~~~~iw~~~ 308 (468)
+|+|.+|+.-.. + .+.+..+++.+...+.+++|..-
T Consensus 70 ~vii~~G~ND~~~~~~~~~~~~~~~~~~i~~i~~~~~~vil~~~ 113 (185)
T cd01832 70 LVTLLAGGNDILRPGTDPDTYRADLEEAVRRLRAAGARVVVFTI 113 (185)
T ss_pred EEEEeccccccccCCCCHHHHHHHHHHHHHHHHhCCCEEEEecC
Confidence 999999997532 3 33455677777767888888643
No 299
>COG2894 MinD Septum formation inhibitor-activating ATPase [Cell division and chromosome partitioning]
Probab=20.17 E-value=1.7e+02 Score=26.35 Aligned_cols=35 Identities=23% Similarity=0.470 Sum_probs=29.2
Q ss_pred EEEEcCC--CCCChHHHHHHHHHHHhCCCCeEEEEEecC
Q 045570 6 LIFVPSP--GIGHLVSTLEFAKHLTDRDDRISVTILSMK 42 (468)
Q Consensus 6 i~~~~~p--~~GH~~P~l~La~~L~~rGH~~~Vt~~~~~ 42 (468)
|.+++.+ +-|..+-.-+|+.+|+.+|+. |.++-..
T Consensus 4 iIVvTSGKGGVGKTTttAnig~aLA~~GkK--v~liD~D 40 (272)
T COG2894 4 IIVVTSGKGGVGKTTTTANIGTALAQLGKK--VVLIDFD 40 (272)
T ss_pred EEEEecCCCCcCccchhHHHHHHHHHcCCe--EEEEecC
Confidence 6777765 889999999999999999988 7666543
No 300
>PRK04761 ppnK inorganic polyphosphate/ATP-NAD kinase; Reviewed
Probab=20.14 E-value=90 Score=28.55 Aligned_cols=28 Identities=21% Similarity=0.265 Sum_probs=22.7
Q ss_pred cccceeeeccCchhHHHHHhc----CCcEEeccC
Q 045570 355 KAIGGFVSHCGWNSILESLWY----GVPIATWPI 384 (468)
Q Consensus 355 ~~~~~~i~HgG~~s~~eal~~----GvP~v~~P~ 384 (468)
+++ +|+-||=||++.+++. ++|++.+-.
T Consensus 26 ~Dl--vi~iGGDGTlL~a~~~~~~~~~PvlGIN~ 57 (246)
T PRK04761 26 ADV--IVALGGDGFMLQTLHRYMNSGKPVYGMNR 57 (246)
T ss_pred CCE--EEEECCCHHHHHHHHHhcCCCCeEEEEeC
Confidence 566 9999999999988664 688887753
Done!