Citrus Sinensis ID: 045577

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390--
Protein Sequence
MDCIRQFSGETTIISLFLFSLSSGSDETEVRDILLAPSTLWGGNSLIPGNSSQSFLVISYKNLPPLVIWVANRNGSINSNLSQDNDLGIIWNVILPRATGSPALQLLVAGNLVLREFSLSHSEGYLWESFDSPSDTILPGMKRGMNLRTGWNQNIKAWNLEKSDTPQLVLWRRTEKVFRSWNGISGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELLQAWKLWSEGDPMEIIDEQTKMKGPFSADELVKCIEVGLLCVQQRIEDWPTMSSVLTMLSNESIKVPQPEEVCFATSSSVDKIVILPTF
Secondary Structure (PSIPRED)
cccccHHHHHHHHHHHHHHcccccccccccccEEEccccEEEEEEEccccccccEEEEEEcccccEEEEEccccccccccccccccccEEEcccccccccccEEEEEccccEEEEEcccccccccEEEcccccccccccccEEccccccccEEEEEEEccccccccEEEEEEccEEEEEcccccccccccccccccccccEEEEEEEEEcccccccccccccccccEEEEEEEEEEEEEEEEEccccccEEEEcccccccEEcccccccccccccccccccccccEEEcEEEEEcccccHHHHHHHccccccccccccccccccccccccHHHHEEEEEEEcEEEcccccccccHHHHHHHHcccccccccccccEEEEccccccccccccc
Secondary Structure Prediction (SSPRO)
ccHHHHHHHHccHHHEEHccccccccccccccEEEccccEEEEEEEcccccccEEEEEEEEccccEEEEEEEccccccccccccccccEEEEEccccccccHHHHHcccccEEEEEccccccccEEEEEccccccccccccEccccccccccEEEEEEEccccccccEEEEcccccccccHHHHHHcccccHHEccccccEEEEEEEEEccccccEEEEEccccccHHHHHHHHHHHHcEEEccccccEEEEEcccccccEEEccccccccccccHHEEccccccccccEEEEEEcccccHHHHHHccEcccccEEEEEcccccccccccHHHHHHHHHHHHHHHcccHcccccccEEEEEccccccccccccccEEEEEcccccccccccc
Coil and Loop (DISEMBL)
mdcirqfsgeTTIISLFLFslssgsdetevRDILlapstlwggnslipgnssqSFLVISYKNLPPLVIWVANrngsinsnlsqdndlgiiwnvilpratgspaLQLLVAGNLVLREFSlshsegylwesfdspsdtilpgmkrgmnlrtgwNQNIkawnleksdtpqLVLWRRTEKVfrswngisggckrnweadcgdgevFLMFegiklpdkseftcefecskysSYVTNILYGIARVILylpedsrleiihrdhktsnvlldaeinpnisdfgparifgdqteevtgrvigtqTLKTVPELLQAWKlwsegdpmeiideqtkmkgpfsadELVKCIEVGLLCVQQRIEDWPTMSSVLTMLsnesikvpqpeevcfatsssvdkivilptf
Flexible Loop (DISEMBL)
MDCIRQFSGETTIISLFLFSLSSGSDETEVRDILLAPSTLWGGNSLIPGNSSQSFLVISYKNLPPLVIWVANRNGSINSNLSQDNDLGIIWNVILPRATGSPALQLLVAGNLVLREFSLSHSEGylwesfdspsDTILPGMKRGMNLRTGWNQNIKawnleksdtpqlVLWRRTEKVfrswngisggckrnWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEINPNISDFGPARIFGDQTEEVTGRvigtqtlktVPELLQAWKLWSEGDPMEIIDEQTKMKGPFSADELVKCIEVGLLCVQQRIEDWPTMSSVLTMLSNESIKVPQPeevcfatsssvdkivilptf
Low Complexity Region (SEG)
MDCIRQFSGETTIIslflfslssgsDETEVRDILLAPSTLWGGNSLIPGNSSQSFLVISYKNLPPLVIWVANRNGSINSNLSQDNDLGIIWNVILPRATGSPALQLLVAGNLVLREFSLSHSEGYLWESFDSPSDTILPGMKRGMNLRTGWNQNIKAWNLEKSDTPQLVLWRRTEKVFRSWNGISGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELLQAWKLWSEGDPMEIIDEQTKMKGPFSADELVKCIEVGLLCVQQRIEDWPTMSSVLTMLSNESIKVPQPEEVCFATSSSVDKIVILPTF
Disordered region (IsUnstruct)
***IRQFSGETTIISLFLFSLSSGSDETEVRDILLAPSTLWGGNSLIPGNSSQSFLVISYKNLPPLVIWVANRNGSINSNLSQDNDLGIIWNVILPRATGSPALQLLVAGNLVLREFSLSHSEGYLWESFDSPSDTILPGMKRGMNLRTGWNQNIKAWNLEKSDTPQLVLWRRTEKVFRSWNGISGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELLQAWKLWSEGDPMEIIDEQTKMKGPFSADELVKCIEVGLLCVQQRIEDWPTMSSVLTML******************************
Disordered Region (DISOPRED)
*DCIRQFSGETTIISLFLFSLSSG********ILLAPSTLWGGNSLIPGNSSQSFLVISYKNLPPLVIWVANRNGSINSNLSQDNDLGIIWNVILPRAT**PALQLLVAGNLVLREFSLSHSEGYLWESFDSPSDTILPGMKRGMNLRTGWNQNIKAWNLEKSDTPQLVLWRRTEKVFRSWNGISGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELLQAWKLWSEGDPMEIIDEQTKMKGPFSADELVKCIEVGLLCVQQRIEDWPTMSSVLTMLSNESIKVPQPEEVCFATSS***********
Disordered Region (DISEMBL)
MDCIRQFSGETTIISLFLFSLSSGSDETEVRDILLAPSTLWGGNSLIPGNSSQSFLVISYKNLPPLVIWVANRNGSINSNLSQDNDLGIIWNVILPRATGSPALQLLVAGNLVLREFSLSHSEGYLWESFDSPSDTILPGMKRGMNLRTGWNQNIKAWNLEKSDTPQLVLWRRTEKVFRSWNGISGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELLQAWKLWSEGDPMEIIDEQTKMKGPFSADELVKCIEVGLLCVQQRIEDWPTMSSVLTMLSNESIKVPQPEEVCFATSSSVDKIVILPTF
Disordered Region (DISPRO)
MDCIRQFSGETTIISLFLFSLSSGSDETEVRDILLAPSTLWGGNSLIPGNSSQSFLVISYKNLPPLVIWVANRNGSINSNLSQDNDLGIIWNVILPRATGSPALQLLVAGNLVLREFSLSHSEGYLWESFDSPSDTILPGMKRGMNLRTGWNQNIKAWNLEKSDTPQLVLWRRTEKVFRSWNGISGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELLQAWKLWSEGDPMEIIDEQTKMKGPFSADELVKCIEVGLLCVQQRIEDWPTMSSVLTMLSNESIKVPQPEEVCFATSSS**********
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MDCIRQFSGETTIISLFLFSLSSGSDETEVRDILLAPSTLWGGNSLIPGNSSQSFLVISYKNLPPLVIWVANRNGSINSNLSQDNDLGIIWNVILPRATGSPALQLLVAGNLVLREFSLSHSEGYLWESFDSPSDTILPGMKRGMNLRTGWNQNIKAWNLEKSDTPQLVLWRRTEKVFRSWNGISGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELLQAWKLWSEGDPMEIIDEQTKMKGPFSADELVKCIEVGLLCVQQRIEDWPTMSSVLTMLSNESIKVPQPEEVCFATSSSVDKIVILPTF
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	392	2.2.26 [Sep-21-2011]
Q9M0X5	675	Cysteine-rich receptor-li	yes	no	0.367	0.213	0.390	2e-29
Q39086	843	Receptor-like serine/thre	no	no	0.385	0.179	0.397	2e-29
Q9C5S8	659	Cysteine-rich receptor-li	no	no	0.354	0.210	0.394	5e-29
Q9S972	847	Receptor-like serine/thre	no	no	0.375	0.173	0.401	6e-29
Q8GYA4	669	Cysteine-rich receptor-li	no	no	0.446	0.261	0.364	9e-29
O81905	850	Receptor-like serine/thre	no	no	0.362	0.167	0.419	2e-28
Q8GWJ7	645	Cysteine-rich receptor-li	no	no	0.357	0.217	0.396	5e-28
Q9LDM5	666	Putative cysteine-rich re	no	no	0.357	0.210	0.381	6e-28
Q8L7G3	659	Cysteine-rich receptor-li	no	no	0.367	0.218	0.375	2e-27
O65479	666	Putative cysteine-rich re	no	no	0.354	0.208	0.394	2e-27

>sp|Q9M0X5|CRK25_ARATH Cysteine-rich receptor-like protein kinase 25 OS=Arabidopsis thaliana GN=CRK25 PE=2 SV=1

 Score =  130 bits (327), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 73/187 (39%), Positives = 103/187 (55%), Gaps = 43/187 (22%)

Query: 232 ILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEINPNISDFGPARIFG-DQTEEVTGR 290
           I+ GIAR ILYL  DSRL IIHRD K SN+LLDA+++P ISDFG ARIFG DQT+  T R
Sbjct: 449 IIEGIARGILYLHRDSRLTIIHRDLKASNILLDADMHPKISDFGMARIFGVDQTQANTKR 508

Query: 291 VIGTQTLKT---------------------VPELLQA-------------------WKLW 310
           ++GT    +                     V EL+                     WKLW
Sbjct: 509 IVGTYGYMSPEYAIHGKYSVKSDVYSFGVLVLELITGKKNSSFYEEDGLGDLVTYVWKLW 568

Query: 311 SEGDPMEIIDEQTKMKGPFSADELVKCIEVGLLCVQQRIEDWPTMSSVLTMLSNESIKVP 370
            E  P+E++DE   M+G F  +E+++CI + LLCVQ+   + P+M  +L M+++ ++ +P
Sbjct: 569 VENSPLELVDE--AMRGNFQTNEVIRCIHIALLCVQEDSSERPSMDDILVMMNSFTVTLP 626

Query: 371 QPEEVCF 377
            P+   F
Sbjct: 627 IPKRSGF 633

Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 7EC: .EC: 1EC: 1EC: .EC: -

>sp|Q39086|SD17_ARATH Receptor-like serine/threonine-protein kinase SD1-7 OS=Arabidopsis thaliana GN=SD17 PE=1 SV=1

 Score =  130 bits (327), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 78/196 (39%), Positives = 104/196 (53%), Gaps = 45/196 (22%)

Query: 231 NILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEINPNISDFGPARIFG-DQTEEVTG 289
           +I+ GIAR +LYL +DSR  IIHRD K SNVLLD  + P ISDFG ARIFG ++TE  T 
Sbjct: 620 DIINGIARGLLYLHQDSRCRIIHRDLKASNVLLDKNMTPKISDFGMARIFGREETEANTR 679

Query: 290 RVIGTQTLKTVPE-------------------LLQ----------------------AWK 308
           RV+GT    + PE                   LL+                       W+
Sbjct: 680 RVVGTYGYMS-PEYAMDGIFSMKSDVFSFGVLLLEIISGKRNKGFYNSNRDLNLLGFVWR 738

Query: 309 LWSEGDPMEIID--EQTKMKGPFSADELVKCIEVGLLCVQQRIEDWPTMSSVLTMLSNES 366
            W EG+ +EI+D      +   F   E+++CI++GLLCVQ+R ED P MSSV+ ML +E+
Sbjct: 739 HWKEGNELEIVDPINIDSLSSKFPTHEILRCIQIGLLCVQERAEDRPVMSSVMVMLGSET 798

Query: 367 IKVPQPEEVCFATSSS 382
             +PQP+   F    S
Sbjct: 799 TAIPQPKRPGFCIGRS 814

Involved in the regulation of cellular expansion and differentiation. Mediates subcellular relocalization of PUB9 from nucleus to plasma membrane in a protein-phosphorylation-dependent manner. May be involved in the abscisic acid-mediated signaling pathway, at least during germination.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9C5S8|CRK5_ARATH Cysteine-rich receptor-like protein kinase 5 OS=Arabidopsis thaliana GN=CRK5 PE=1 SV=1

 Score =  129 bits (323), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 73/185 (39%), Positives = 106/185 (57%), Gaps = 46/185 (24%)

Query: 232 ILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEINPNISDFGPARIFG-DQTEEVTGR 290
           I+ GIAR ILYL +DSRL IIHRD K  N+LLDA++NP ++DFG ARIF  DQTE  T R
Sbjct: 442 IIGGIARGILYLHQDSRLTIIHRDLKAGNILLDADMNPKVADFGMARIFEIDQTEAHTRR 501

Query: 291 VIGTQ-------------TLKT--------VPELLQA--------------------WKL 309
           V+GT              ++K+        V E++                      W+L
Sbjct: 502 VVGTYGYMSPEYAMYGQFSMKSDVYSFGVLVLEIISGRKNSSLYQMDASFGNLVTYTWRL 561

Query: 310 WSEGDPMEIIDEQTKMKGPFSADELVKCIEVGLLCVQQRIEDWPTMSSVLTMLSNESI-- 367
           WS+G P++++D  +  +  +  +E+++CI + LLCVQ+  E+ PTMS+++ ML+  SI  
Sbjct: 562 WSDGSPLDLVD--SSFRDSYQRNEIIRCIHIALLCVQEDTENRPTMSAIVQMLTTSSIAL 619

Query: 368 KVPQP 372
            VPQP
Sbjct: 620 AVPQP 624

Involved in multiple distinct defense responses. May function as a disease resistance (R) protein.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: -

>sp|Q9S972|SD16_ARATH Receptor-like serine/threonine-protein kinase SD1-6 OS=Arabidopsis thaliana GN=SD16 PE=1 SV=2

 Score =  128 bits (322), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 77/192 (40%), Positives = 102/192 (53%), Gaps = 45/192 (23%)

Query: 231 NILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEINPNISDFGPARIFG-DQTEEVTG 289
           +I+ GIAR +LYL +DSR  IIHRD K SNVLLD  + P ISDFG ARIFG ++TE  T 
Sbjct: 624 DIINGIARGLLYLHQDSRCRIIHRDLKASNVLLDKNMTPKISDFGMARIFGREETEANTR 683

Query: 290 RVIGTQTLKTVPE-------------------LLQ----------------------AWK 308
           RV+GT    + PE                   LL+                       W+
Sbjct: 684 RVVGTYGYMS-PEYAMDGIFSMKSDVFSFGVLLLEIISGKRNKGFYNSNRDLNLLGFVWR 742

Query: 309 LWSEGDPMEIID--EQTKMKGPFSADELVKCIEVGLLCVQQRIEDWPTMSSVLTMLSNES 366
            W EG  +EI+D      +   F   E+++CI++GLLCVQ+R ED P MSSV+ ML +E+
Sbjct: 743 HWKEGKELEIVDPINIDALSSEFPTHEILRCIQIGLLCVQERAEDRPVMSSVMVMLGSET 802

Query: 367 IKVPQPEEVCFA 378
             +PQP+   F 
Sbjct: 803 TAIPQPKRPGFC 814

Involved in the regulation of cellular expansion and differentiation.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q8GYA4|CRK10_ARATH Cysteine-rich receptor-like protein kinase 10 OS=Arabidopsis thaliana GN=CRK10 PE=1 SV=3

 Score =  128 bits (321), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 82/225 (36%), Positives = 120/225 (53%), Gaps = 50/225 (22%)

Query: 196 CGDGE-VFLMFEGIKLPDKSEFTCEFECSKYS----SYVTNILYGIARVILYLPEDSRLE 250
           C DGE   L++E +  P+KS     F+ +K      +    I+ G+AR ILYL +DSRL 
Sbjct: 411 CLDGEERVLVYEYV--PNKSLDYFLFDPAKKGQLDWTRRYKIIGGVARGILYLHQDSRLT 468

Query: 251 IIHRDHKTSNVLLDAEINPNISDFGPARIFG-DQTEEVTGRVIGT--------------- 294
           IIHRD K SN+LLDA++NP I+DFG ARIFG DQTEE T R++GT               
Sbjct: 469 IIHRDLKASNILLDADMNPKIADFGMARIFGLDQTEENTSRIVGTYGYMSPEYAMHGQYS 528

Query: 295 -------------------------QTLKTVPELLQAWKLWSEGDPMEIIDEQTKMKGPF 329
                                    QT      +  AW LWS G P+E++D    +    
Sbjct: 529 MKSDVYSFGVLVLEIISGKKNSSFYQTDGAHDLVSYAWGLWSNGRPLELVDP--AIVENC 586

Query: 330 SADELVKCIEVGLLCVQQRIEDWPTMSSVLTMLSNESIKVPQPEE 374
             +E+V+C+ +GLLCVQ+   + PT+S+++ ML++ ++ +P P +
Sbjct: 587 QRNEVVRCVHIGLLCVQEDPAERPTLSTIVLMLTSNTVTLPVPRQ 631

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: -

>sp|O81905|SD18_ARATH Receptor-like serine/threonine-protein kinase SD1-8 OS=Arabidopsis thaliana GN=SD18 PE=1 SV=1

 Score =  127 bits (319), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 78/186 (41%), Positives = 101/186 (54%), Gaps = 44/186 (23%)

Query: 231 NILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEINPNISDFGPARIFG-DQTEEVTG 289
           +I+ GIAR +LYL +DSR  IIHRD K SN+LLD  + P ISDFG ARIFG D+TE  T 
Sbjct: 627 DIINGIARGLLYLHQDSRFRIIHRDLKASNILLDKYMTPKISDFGMARIFGRDETEANTR 686

Query: 290 RVIGTQTLKTVPE-------------------LLQ----------------------AWK 308
           +V+GT    + PE                   LL+                       W+
Sbjct: 687 KVVGTYGYMS-PEYAMDGIFSMKSDVFSFGVLLLEIISSKRNKGFYNSDRDLNLLGCVWR 745

Query: 309 LWSEGDPMEIIDE-QTKMKGPFSADELVKCIEVGLLCVQQRIEDWPTMSSVLTMLSNESI 367
            W EG  +EIID   T     F   E+++CI++GLLCVQ+R ED PTMS V+ ML +ES 
Sbjct: 746 NWKEGKGLEIIDPIITDSSSTFRQHEILRCIQIGLLCVQERAEDRPTMSLVILMLGSEST 805

Query: 368 KVPQPE 373
            +PQP+
Sbjct: 806 TIPQPK 811

Involved in the regulation of cellular expansion and differentiation.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q8GWJ7|CRK19_ARATH Cysteine-rich receptor-like protein kinase 19 OS=Arabidopsis thaliana GN=CRK19 PE=2 SV=2

 Score =  125 bits (315), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 73/184 (39%), Positives = 97/184 (52%), Gaps = 44/184 (23%)

Query: 232 ILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEINPNISDFGPARIFG-DQTEEVTGR 290
           I+ GIAR ILYL +DSRL IIHRD K  N+LLD ++NP I+DFG ARIFG DQTE +T R
Sbjct: 428 IIGGIARGILYLHQDSRLTIIHRDLKAGNILLDDDMNPKIADFGMARIFGMDQTEAMTRR 487

Query: 291 VIGT----------------------------------------QTLKTVPELLQ-AWKL 309
           V+GT                                        Q  ++V  L+   W+L
Sbjct: 488 VVGTYGYMSPEYAMYGQFSMKSDVYSFGVLVLEIISGMKNSSLYQMDESVGNLVTYTWRL 547

Query: 310 WSEGDPMEIIDEQTKMKGPFSADELVKCIEVGLLCVQQRIEDWPTMSSVLTMLSNESIKV 369
           WS G P E++D        +   E+ +CI + LLCVQ+  ED PTMSS++ ML+   I +
Sbjct: 548 WSNGSPSELVDP--SFGDNYQTSEITRCIHIALLCVQEDAEDRPTMSSIVQMLTTSLIAL 605

Query: 370 PQPE 373
            +P 
Sbjct: 606 AEPR 609

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: -

>sp|Q9LDM5|CRK31_ARATH Putative cysteine-rich receptor-like protein kinase 31 OS=Arabidopsis thaliana GN=CRK31 PE=3 SV=1

 Score =  125 bits (314), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 71/186 (38%), Positives = 99/186 (53%), Gaps = 46/186 (24%)

Query: 231 NILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEINPNISDFGPARIFG-DQTEEVTG 289
           NI+ G+ R +LYL +DSRL IIHRD K SN+LLDA++NP I+DFG AR F  DQTE+ TG
Sbjct: 440 NIIGGVTRGLLYLHQDSRLTIIHRDIKASNILLDADMNPKIADFGMARNFRVDQTEDQTG 499

Query: 290 RVIGTQTLKTVPELL------------------------------------------QAW 307
           RV+GT      PE +                                            W
Sbjct: 500 RVVGTFGYMP-PEYVTHGQFSTKSDVYSFGVLILEIVCGKKNSSFFQMDDSGGNLVTHVW 558

Query: 308 KLWSEGDPMEIIDEQTKMKGPFSADELVKCIEVGLLCVQQRIEDWPTMSSVLTMLSNESI 367
           +LW+   P+++ID    +K  +  DE+++CI +G+LCVQ+   D P MS++  ML+N SI
Sbjct: 559 RLWNNDSPLDLIDP--AIKESYDNDEVIRCIHIGILCVQETPADRPEMSTIFQMLTNSSI 616

Query: 368 KVPQPE 373
            +P P 
Sbjct: 617 TLPVPR 622

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: -

>sp|Q8L7G3|CRK7_ARATH Cysteine-rich receptor-like protein kinase 7 OS=Arabidopsis thaliana GN=CRK7 PE=2 SV=1

 Score =  124 bits (310), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 74/197 (37%), Positives = 108/197 (54%), Gaps = 53/197 (26%)

Query: 231 NILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEINPNISDFGPARIFG-DQTEEVTG 289
           +I+ GIAR ILYL +DSRL IIHRD K SN+LLDA++NP I+DFG ARIFG DQT++ T 
Sbjct: 437 HIIGGIARGILYLHQDSRLTIIHRDLKASNILLDADMNPKIADFGMARIFGMDQTQQNTS 496

Query: 290 RVIGTQ-------------TLKT--------VPELL-------------------QAWKL 309
           R++GT              ++K+        V E++                    AW+L
Sbjct: 497 RIVGTYGYMSPEYAMRGQFSMKSDVYSFGVLVLEIISGRKNNSFIETDDAQDLVTHAWRL 556

Query: 310 WSEGDPMEIIDEQTKMKGPFSAD-----ELVKCIEVGLLCVQQRIEDWPTMSSVLTMLSN 364
           W  G  ++++D       PF AD     E+V+C  +GLLCVQ+     P MS++  ML++
Sbjct: 557 WRNGTALDLVD-------PFIADSCRKSEVVRCTHIGLLCVQEDPVKRPAMSTISVMLTS 609

Query: 365 ESIKVPQPEEVCFATSS 381
            ++ +P P++  F   S
Sbjct: 610 NTMALPAPQQPGFFVRS 626

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: -

>sp|O65479|CRK20_ARATH Putative cysteine-rich receptor-like protein kinase 20 OS=Arabidopsis thaliana GN=CRK20 PE=2 SV=2

 Score =  124 bits (310), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 73/185 (39%), Positives = 97/185 (52%), Gaps = 46/185 (24%)

Query: 232 ILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEINPNISDFGPARIFG-DQTEEVTGR 290
           I+ GIAR ILYL +DSRL IIHRD K  N+LLDA++NP ++DFG ARIFG DQTE  T R
Sbjct: 446 IIGGIARGILYLHQDSRLTIIHRDLKAGNILLDADMNPKVADFGMARIFGMDQTEANTRR 505

Query: 291 VIGT----------------------------------------QTLKTVPELLQ-AWKL 309
           V+GT                                        Q   ++  L+   W+L
Sbjct: 506 VVGTYGYMAPEYAMYGKFSMKSDVYSFGVLVLEIVSGMKNSSLDQMDGSISNLVTYTWRL 565

Query: 310 WSEGDPMEIIDEQTKMKGPFSADELVKCIEVGLLCVQQRIEDWPTMSSVLTMLSNESI-- 367
           WS G P E++D        +   E+ +CI + LLCVQ+   D PTMS+++ ML+  SI  
Sbjct: 566 WSNGSPSELVDP--SFGDNYQTSEITRCIHIALLCVQEDANDRPTMSAIVQMLTTSSIAL 623

Query: 368 KVPQP 372
            VP+P
Sbjct: 624 AVPRP 628

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: -

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	392
296086946	407	unnamed protein product [Vitis vinifera]	0.380	0.366	0.463	2e-34
357475991	852	Serine/threonine protein kinase [Medicag	0.382	0.176	0.435	5e-32
356546692	850	PREDICTED: receptor-like serine/threonin	0.369	0.170	0.442	2e-31
224122974	729	predicted protein [Populus trichocarpa]	0.377	0.203	0.438	2e-30
147784081	486	hypothetical protein VITISV_005491 [Viti	0.785	0.633	0.274	2e-30
356527945	1062	PREDICTED: receptor-like serine/threonin	0.372	0.137	0.428	4e-30
125600650	424	hypothetical protein OsJ_24671 [Oryza sa	0.377	0.349	0.398	4e-30
255555125	830	S-locus-specific glycoprotein S13 precur	0.448	0.212	0.422	5e-30
218199816	857	hypothetical protein OsI_26417 [Oryza sa	0.377	0.172	0.401	6e-30
255555123	825	S-locus-specific glycoprotein S6 precurs	0.369	0.175	0.441	6e-30

>gi|296086946|emb|CBI33179.3| unnamed protein product [Vitis vinifera]

 Score =  153 bits (386), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 90/194 (46%), Positives = 114/194 (58%), Gaps = 45/194 (23%)

Query: 231 NILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEINPNISDFGPARIF-GDQTEEVTG 289
           +I+ GIAR +LYL +DSRL IIHRD KTSN+LLD+E+NP ISDFG ARIF GDQ EE T 
Sbjct: 190 DIVLGIARGLLYLHQDSRLRIIHRDLKTSNILLDSEMNPKISDFGIARIFGGDQMEEKTR 249

Query: 290 RVIGTQTLKTVPE-----------------------------------------LLQAWK 308
           RV+GT    + PE                                         L  AWK
Sbjct: 250 RVVGTYGYMS-PEYALNGQFSVKSDVFSFGVILLEIVSGKKNWGFYHPDHDFNLLGHAWK 308

Query: 309 LWSEGDPMEIIDEQTKMKGPFSADELVKCIEVGLLCVQQRIEDWPTMSSVLTMLSNESIK 368
           LW+EG P+E++D    ++  FSAD++V+CI+V LLCVQ R ED P MSSV+ MLSN+S  
Sbjct: 309 LWNEGIPLELVD--VLLEDSFSADDMVRCIQVALLCVQLRPEDRPIMSSVVFMLSNQSAV 366

Query: 369 VPQPEEVCFATSSS 382
             QP+E  F T ++
Sbjct: 367 AAQPKEPGFVTGNT 380

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357475991|ref|XP_003608281.1| Serine/threonine protein kinase [Medicago truncatula] gi|355509336|gb|AES90478.1| Serine/threonine protein kinase [Medicago truncatula]

 Score =  144 bits (364), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 84/193 (43%), Positives = 109/193 (56%), Gaps = 43/193 (22%)

Query: 231 NILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEINPNISDFGPARIFG-DQTEEVTG 289
           NI+ GIAR +LYL +DSR  IIHRD K SN+LLD E+NP ISDFG ARIFG DQTE  T 
Sbjct: 634 NIISGIARGLLYLHQDSRFRIIHRDLKASNILLDGEMNPKISDFGMARIFGTDQTEANTV 693

Query: 290 RVIGTQTL----------------------------------------KTVPELLQAWKL 309
           RV+GT                                           K +  L  +WKL
Sbjct: 694 RVVGTYGYMSPEYAMDGIFSVKSDVFSFGVLVMEIISGKKNRGFYSANKELNLLGHSWKL 753

Query: 310 WSEGDPMEIIDEQTKMKGPFSADELVKCIEVGLLCVQQRIEDWPTMSSVLTMLSNESIKV 369
           W+EG+ +E+ID  + +   +S  E+ +CI+VGLLCVQ+R ED PTMSSV+ MLS+E+  +
Sbjct: 754 WNEGNALELID--SSIVNSYSPAEVFRCIQVGLLCVQERAEDRPTMSSVVLMLSSETATI 811

Query: 370 PQPEEVCFATSSS 382
            QP+   F   S+
Sbjct: 812 AQPKNPGFCLGSN 824

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356546692|ref|XP_003541757.1| PREDICTED: receptor-like serine/threonine-protein kinase SD1-8-like [Glycine max]

 Score =  143 bits (360), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 84/190 (44%), Positives = 106/190 (55%), Gaps = 45/190 (23%)

Query: 231 NILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEINPNISDFGPARIFG-DQTEEVTG 289
           NI+ GIAR +LYL  DSR  IIHRD K SN+LLD+E+NP ISDFG AR+FG +QTE  T 
Sbjct: 632 NIICGIARGLLYLHHDSRFRIIHRDLKASNILLDSEMNPKISDFGMARLFGSNQTEANTS 691

Query: 290 RVIGTQTLKTVPE-----------------------------------------LLQAWK 308
           RV+GT    + PE                                         L  AW+
Sbjct: 692 RVVGTYGYMS-PEYAMDGNFSVKSDVFSFGVLVLEIITGKKNRGFYYSNEDMNLLGNAWR 750

Query: 309 LWSEGDPMEIIDEQTKMKGPFSADELVKCIEVGLLCVQQRIEDWPTMSSVLTMLSNESIK 368
            W +G  +E+ID  T     +S  E+++CI VGLLCVQ+R ED PTMSSVL MLS+ES+ 
Sbjct: 751 QWRDGSALELIDSST--GDSYSPSEVLRCIHVGLLCVQERAEDRPTMSSVLLMLSSESVL 808

Query: 369 VPQPEEVCFA 378
           +PQP    F+
Sbjct: 809 MPQPRNPGFS 818

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224122974|ref|XP_002330410.1| predicted protein [Populus trichocarpa] gi|222871795|gb|EEF08926.1| predicted protein [Populus trichocarpa]

 Score =  139 bits (351), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 85/194 (43%), Positives = 111/194 (57%), Gaps = 46/194 (23%)

Query: 231 NILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEINPNISDFGPARIF-GDQTEEVTG 289
           NI+ GIAR +LYL +DSRL IIHRD K SNVLLD  +NP ISDFG AR F GDQ E  T 
Sbjct: 513 NIIGGIARGLLYLHQDSRLRIIHRDLKASNVLLDDSMNPKISDFGMARTFGGDQIEANTS 572

Query: 290 RVIGTQTLKTVPE-----------------------------------------LLQAWK 308
           R++GT    + PE                                         L  AW+
Sbjct: 573 RIVGTYGYMS-PEYAVDGLFSIKSDVFSFGVLVLEIVSAKKNRGFFHPDHNHNLLGHAWR 631

Query: 309 LWSEGDPMEIIDEQTKMKGPFSADELVKCIEVGLLCVQQRIEDWPTMSSVLTMLSNESIK 368
           LW+EG P+E++++  K+    S  E+++CI+VGLLCVQQR ED P+MS+V+ MLS+E I 
Sbjct: 632 LWNEGRPLELMNK--KIDDSSSLSEVIRCIQVGLLCVQQRPEDRPSMSTVVVMLSSE-IS 688

Query: 369 VPQPEEVCFATSSS 382
           +PQP++  F T  S
Sbjct: 689 LPQPKQPGFYTERS 702

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147784081|emb|CAN67875.1| hypothetical protein VITISV_005491 [Vitis vinifera]

 Score =  139 bits (350), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 126/459 (27%), Positives = 183/459 (39%), Gaps = 151/459 (32%)

Query: 67  VIWVANRNGSIN-----------SNLSQDNDLGIIW--NVILPRATGSPALQLLVAGNLV 113
           V+WV NR+  IN            NL   +    +W  NV +     + A QL   GNLV
Sbjct: 10  VVWVLNRDHPINDTSGVLSINTFGNLLLHHGNTHVWSTNVSISSVNATVA-QLSDTGNLV 68

Query: 114 LREFSLSHSEGYLWESFDSPSDTILPGMKRGMNLRTGWNQNIKAWN-------------- 159
           L +   +  +  +W+ FD P+DT+LP MK G++ RTG N+ + +W               
Sbjct: 69  LIQ---NDDKRVVWQGFDHPTDTMLPHMKLGLDRRTGLNRFLTSWKVTGRPGNRIKLGSD 125

Query: 160 -------LEKSDTPQLVLWRRTE---------------------------------KVFR 179
                  L++ +   + +W                                     K  R
Sbjct: 126 GVHQRYTLDERNHQLVAIWSAARDPCDNYGRCGPNSNCDVYTGSGFECTCLAGFQPKSLR 185

Query: 180 SWN--GISGGCKR-NWEADCGDGEVFLMFEGIKLPD---------------KSEFTCEFE 221
            W+    SGGC R      CG GE F+   G+K PD               K E   +  
Sbjct: 186 DWSLRDGSGGCVRIQGTNTCGSGEGFIKIAGVKPPDASTARVNESLNLEGCKKECLNDCN 245

Query: 222 CSKYSSYVTN-------------------------------------------------- 231
           C  Y+S   N                                                  
Sbjct: 246 CRAYTSANVNTGGSGCLSWYGDIMDIRTFAQGGQDLFVRVDAIILDETKRSMLTWRKRFE 305

Query: 232 ILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEINPNISDFGPARIFG-DQTEEVTGR 290
           I+ GIAR ILYL +DSRL IIHRD K SN+LLD ++ P I D G AR+FG +Q E  T R
Sbjct: 306 IIIGIARGILYLHQDSRLRIIHRDLKASNILLDIDMIPKILDIGMARLFGKNQIEGSTNR 365

Query: 291 VIGTQTLKTVPELLQA--------WKLWSEGDPMEIIDEQTKMKGPFSADELVKCIEVGL 342
           V+GT    ++   ++         W LW EG   +I+D    ++    A+E+++C+++GL
Sbjct: 366 VVGTYGYMSLEYAMEGLFSIKFDVWSLWREGKAWDIVDPS--LEKSNHANEVLRCVQIGL 423

Query: 343 LCVQQRIEDWPTMSSVLTMLSNESIKVPQPEEVCFATSS 381
           LCVQ+   D P M  V+ ML N S  +P   ++ F   +
Sbjct: 424 LCVQESAIDRPKMLIVIFMLDNNS-TLPSSNQLAFVMKT 461

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356527945|ref|XP_003532566.1| PREDICTED: receptor-like serine/threonine-protein kinase SD1-8-like [Glycine max]

 Score =  138 bits (348), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 81/189 (42%), Positives = 105/189 (55%), Gaps = 43/189 (22%)

Query: 231  NILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEINPNISDFGPARIFG-DQTEEVTG 289
            NI+ GIAR +LYL +DSR  IIHRD K SN+LLD E+NP ISDFG ARIFG DQTE  T 
Sbjct: 844  NIICGIARGLLYLHQDSRFRIIHRDLKASNILLDKEMNPKISDFGMARIFGTDQTEANTM 903

Query: 290  RVIGTQTL----------------------------------------KTVPELLQAWKL 309
            RV+GT                                           K +  L  AWKL
Sbjct: 904  RVVGTYGYMSPEYAMDGIFSVKSDVFSFGVLVLEIISGKKNRGFYSANKELNLLGHAWKL 963

Query: 310  WSEGDPMEIIDEQTKMKGPFSADELVKCIEVGLLCVQQRIEDWPTMSSVLTMLSNESIKV 369
            W E + +E+ID    +   +S  E+++CI+VGLLCVQ+R ED PTM+SV+ MLS+++  +
Sbjct: 964  WKEENALELIDPS--IDNSYSESEVLRCIQVGLLCVQERAEDRPTMASVVLMLSSDTASM 1021

Query: 370  PQPEEVCFA 378
             QP+   F 
Sbjct: 1022 SQPKNPGFC 1030

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|125600650|gb|EAZ40226.1| hypothetical protein OsJ_24671 [Oryza sativa Japonica Group]

 Score =  138 bits (348), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 77/193 (39%), Positives = 103/193 (53%), Gaps = 45/193 (23%)

Query: 231 NILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEINPNISDFGPARIFGDQTEEVTGR 290
           NI+ GIAR +LYL +DSR +IIHRD K  N+LLD ++NP ISDFG ARIFGD T+  T +
Sbjct: 203 NIILGIARGLLYLHQDSRFKIIHRDLKAGNILLDGDMNPKISDFGVARIFGDDTDSHTRK 262

Query: 291 VIGTQTLKTVPE-----------------------------------------LLQAWKL 309
           V+GT    + PE                                         L  AW+L
Sbjct: 263 VVGTYGYMS-PEYAMDGVFSVKSDVFSFGVLVLELVSGRKNRGMYSSGEQTSLLSHAWRL 321

Query: 310 WSEGDPMEIIDEQTK---MKGPFSADELVKCIEVGLLCVQQRIEDWPTMSSVLTMLSNES 366
           W EG+ + ++DE        G +S  E+++C++VGLLCVQ+R ED P M++V  ML N S
Sbjct: 322 WREGNALALLDEAVAGGGGGGGYSRSEVLRCVQVGLLCVQERPEDRPHMAAVFMMLGNLS 381

Query: 367 IKVPQPEEVCFAT 379
             VPQP    F +
Sbjct: 382 AVVPQPRHPGFCS 394

Source: Oryza sativa Japonica Group

Species: Oryza sativa

Genus: Oryza

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255555125|ref|XP_002518600.1| S-locus-specific glycoprotein S13 precursor, putative [Ricinus communis] gi|223542445|gb|EEF43987.1| S-locus-specific glycoprotein S13 precursor, putative [Ricinus communis]

 Score =  138 bits (347), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 95/225 (42%), Positives = 121/225 (53%), Gaps = 49/225 (21%)

Query: 200 EVFLMFEGIKLPDKSEFTCEFECSKYSSY----VTNILYGIARVILYLPEDSRLEIIHRD 255
           E  L++E   +P +S   C F  ++ +S       NI+ GIAR +LYL  DSRL IIHRD
Sbjct: 580 ERMLVYE--YMPKRSLDLCLFNQTRGTSLDWQKRFNIIVGIARGLLYLHRDSRLRIIHRD 637

Query: 256 HKTSNVLLDAEINPNISDFGPARIF-GDQTEEVTGRVIGTQ------------------- 295
            K SN+LLD E+NP ISDFG AR F GDQ E  T RVIGT                    
Sbjct: 638 LKASNILLDDEMNPKISDFGLARTFGGDQNEVNTNRVIGTYGYMPPEYAIDGLFSVKSDV 697

Query: 296 ------TLKTV----------PE-----LLQAWKLWSEGDPMEIIDEQTKMKGPFSADEL 334
                  L+ V          PE     L  AW+LW E  P E++D  + M+ P    EL
Sbjct: 698 FSFGVLVLEIVTGKKNRGFYHPEHDLNLLGHAWRLWIEERPAELMD--SVMEQPVPTPEL 755

Query: 335 VKCIEVGLLCVQQRIEDWPTMSSVLTMLSNESIKVPQPEEVCFAT 379
           +K I VGLLCVQQR ED PTMS V+ ML ++++ +PQP++  F T
Sbjct: 756 LKSIHVGLLCVQQRPEDRPTMSQVVLMLDSQNLTLPQPKQPGFYT 800

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|218199816|gb|EEC82243.1| hypothetical protein OsI_26417 [Oryza sativa Indica Group]

 Score =  138 bits (347), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 77/192 (40%), Positives = 103/192 (53%), Gaps = 44/192 (22%)

Query: 231 NILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEINPNISDFGPARIFGDQTEEVTGR 290
           NI+ GIAR +LYL +DSR +IIHRD K  N+LLD ++NP ISDFG ARIFGD T+  T +
Sbjct: 637 NIILGIARGLLYLHQDSRFKIIHRDLKAGNILLDGDMNPKISDFGVARIFGDDTDSHTRK 696

Query: 291 VIGTQTLKTVPE-----------------------------------------LLQAWKL 309
           V+GT    + PE                                         L  AW+L
Sbjct: 697 VVGTYGYMS-PEYAMDGVFSVKSDVFSFGVLVLELVSGRKNRGMYSSGEQTSLLSHAWRL 755

Query: 310 WSEGDPMEIIDEQTK--MKGPFSADELVKCIEVGLLCVQQRIEDWPTMSSVLTMLSNESI 367
           W EG+ + ++DE       G +S  E+++C++VGLLCVQ+R ED P M++V  ML N S 
Sbjct: 756 WREGNALALLDEAVAGGGGGGYSRSEVLRCVQVGLLCVQERPEDRPHMAAVFMMLGNLSA 815

Query: 368 KVPQPEEVCFAT 379
            VPQP    F +
Sbjct: 816 VVPQPRHPGFCS 827

Source: Oryza sativa Indica Group

Species: Oryza sativa

Genus: Oryza

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255555123|ref|XP_002518599.1| S-locus-specific glycoprotein S6 precursor, putative [Ricinus communis] gi|223542444|gb|EEF43986.1| S-locus-specific glycoprotein S6 precursor, putative [Ricinus communis]

 Score =  137 bits (346), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 83/188 (44%), Positives = 107/188 (56%), Gaps = 43/188 (22%)

Query: 231 NILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEINPNISDFGPARIF-GDQTEEVTG 289
           +I+ GIAR +LYL  DSRL IIHRD K SNVLLD ++NP ISDFG AR+F GDQTE  T 
Sbjct: 610 DIIIGIARGLLYLHRDSRLRIIHRDLKASNVLLDNQLNPKISDFGMARMFGGDQTEGNTK 669

Query: 290 RVIGTQ-------------TLKT----------------------VPE-----LLQAWKL 309
           R++GT              ++K+                       PE     L  AWKL
Sbjct: 670 RIVGTYGYMPPEYAIDGNFSIKSDAFSFGVILLEIVSGKRNRGFFRPEHKLNLLGHAWKL 729

Query: 310 WSEGDPMEIIDEQTKMKGPFSADELVKCIEVGLLCVQQRIEDWPTMSSVLTMLSNESIKV 369
           WSE   +E++DE   ++  F   E+++CI+VGLLCVQ R E+ PTM++VL ML  ES  +
Sbjct: 730 WSEAKALELVDEL--LENEFPVSEVLRCIQVGLLCVQHRPEERPTMATVLLMLDTESTFL 787

Query: 370 PQPEEVCF 377
           PQP    F
Sbjct: 788 PQPGHPGF 795

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	392
TAIR|locus:2141181	850	RK3 "receptor kinase 3" [Arabi	0.385	0.177	0.327	2.9e-45
TAIR|locus:2018506	847	RK2 "receptor kinase 2" [Arabi	0.163	0.075	0.630	5.8e-42
TAIR|locus:2018546	843	RK1 "receptor kinase 1" [Arabi	0.163	0.075	0.630	3.8e-41
TAIR|locus:2131694	815	AT4G27300 [Arabidopsis thalian	0.163	0.078	0.646	2.6e-38
TAIR|locus:2131684	783	AT4G27290 [Arabidopsis thalian	0.160	0.080	0.656	1.1e-36
TAIR|locus:2200151	830	SD1-13 "S-domain-1 13" [Arabid	0.163	0.077	0.615	2.1e-34
TAIR|locus:2200908	842	AT1G61610 [Arabidopsis thalian	0.242	0.112	0.490	2.8e-34
TAIR|locus:2141176	849	B120 [Arabidopsis thaliana (ta	0.247	0.114	0.523	2.9e-33
TAIR|locus:2197664	804	AT1G61490 [Arabidopsis thalian	0.288	0.140	0.439	1.3e-29
TAIR|locus:2093397	850	CES101 "CALLUS EXPRESSION OF R	0.160	0.074	0.562	9.7e-29

TAIR|locus:2141181 RK3 "receptor kinase 3" [Arabidopsis thaliana (taxid:3702)]

 Score = 216 (81.1 bits), Expect = 2.9e-45, Sum P(3) = 2.9e-45
 Identities = 59/180 (32%), Positives = 96/180 (53%)

Query:    34 LLAPSTLWGGNSLIPGNSSQSFLVISYKNLPPLV-IWVANRNGSINSNLS----QDNDLG 88
             +++P  ++      PG  S+ +L I YK +     +WVANR+  ++S++      D++L 
Sbjct:    46 IVSPGNVFELGFFKPGLDSRWYLGIWYKAISKRTYVWVANRDTPLSSSIGTLKISDSNLV 105

Query:    89 I-------IWNVILPRA-TGSPAL-QLLVAGNLVLREFSLSHSEGYLWESFDSPSDTILP 139
             +       +W+  L      SP + +LL  GN VLR+   S  +G LW+SFD P+DT+LP
Sbjct:   106 VLDQSDTPVWSTNLTGGDVRSPLVAELLDNGNFVLRDSKNSAPDGVLWQSFDFPTDTLLP 165

Query:   140 GMKRGMNLRTGWNQNIKAWN-------------LEKSDTPQLVLWRRTEKVFRS--WNGI 184
              MK G + +TG+N+ I++W              LE    P++ LW R  +++RS  WNGI
Sbjct:   166 EMKLGWDAKTGFNRFIRSWKSPDDPSSGDFSFKLETEGFPEIFLWNRESRMYRSGPWNGI 225

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0030246 "carbohydrate binding" evidence=IEA

GO:0048544 "recognition of pollen" evidence=IEA

GO:0004675 "transmembrane receptor protein serine/threonine kinase activity" evidence=ISS

GO:0005773 "vacuole" evidence=IDA

GO:0031625 "ubiquitin protein ligase binding" evidence=IPI

GO:0009506 "plasmodesma" evidence=IDA

GO:0046777 "protein autophosphorylation" evidence=RCA

TAIR|locus:2018506 RK2 "receptor kinase 2" [Arabidopsis thaliana (taxid:3702)]

 Score = 192 (72.6 bits), Expect = 5.8e-42, Sum P(4) = 5.8e-42
 Identities = 41/65 (63%), Positives = 49/65 (75%)

Query:   231 NILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEINPNISDFGPARIFG-DQTEEVTG 289
             +I+ GIAR +LYL +DSR  IIHRD K SNVLLD  + P ISDFG ARIFG ++TE  T 
Sbjct:   624 DIINGIARGLLYLHQDSRCRIIHRDLKASNVLLDKNMTPKISDFGMARIFGREETEANTR 683

Query:   290 RVIGT 294
             RV+GT
Sbjct:   684 RVVGT 688

GO:0004672 "protein kinase activity" evidence=IEA;IDA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA;IDA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0030246 "carbohydrate binding" evidence=IEA

GO:0048544 "recognition of pollen" evidence=IEA

GO:0005829 "cytosol" evidence=IDA

GO:0031625 "ubiquitin protein ligase binding" evidence=IPI

GO:0034613 "cellular protein localization" evidence=IGI

GO:0046777 "protein autophosphorylation" evidence=IDA

GO:0004675 "transmembrane receptor protein serine/threonine kinase activity" evidence=ISS

TAIR|locus:2018546 RK1 "receptor kinase 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 192 (72.6 bits), Expect = 3.8e-41, Sum P(4) = 3.8e-41
 Identities = 41/65 (63%), Positives = 49/65 (75%)

Query:   231 NILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEINPNISDFGPARIFG-DQTEEVTG 289
             +I+ GIAR +LYL +DSR  IIHRD K SNVLLD  + P ISDFG ARIFG ++TE  T 
Sbjct:   620 DIINGIARGLLYLHQDSRCRIIHRDLKASNVLLDKNMTPKISDFGMARIFGREETEANTR 679

Query:   290 RVIGT 294
             RV+GT
Sbjct:   680 RVVGT 684

GO:0004672 "protein kinase activity" evidence=IEA;IDA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA;IDA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA;IDA

GO:0009875 "pollen-pistil interaction" evidence=TAS

GO:0016020 "membrane" evidence=ISS

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0019199 "transmembrane receptor protein kinase activity" evidence=ISS

GO:0030246 "carbohydrate binding" evidence=IEA

GO:0048544 "recognition of pollen" evidence=IEA

GO:0005634 "nucleus" evidence=IDA

GO:0046777 "protein autophosphorylation" evidence=IDA

TAIR|locus:2131694 AT4G27300 [Arabidopsis thaliana (taxid:3702)]

 Score = 203 (76.5 bits), Expect = 2.6e-38, Sum P(4) = 2.6e-38
 Identities = 42/65 (64%), Positives = 50/65 (76%)

Query:   231 NILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEINPNISDFGPARIFG-DQTEEVTG 289
             NI+ G+AR ILYL +DSRL IIHRD K  NVLLD ++NP ISDFG A+ FG DQ+E  T 
Sbjct:   601 NIINGVARGILYLHQDSRLRIIHRDLKAGNVLLDNDMNPKISDFGLAKSFGGDQSESSTN 660

Query:   290 RVIGT 294
             RV+GT
Sbjct:   661 RVVGT 665

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0030246 "carbohydrate binding" evidence=IEA;ISS

GO:0048544 "recognition of pollen" evidence=IEA

GO:0031625 "ubiquitin protein ligase binding" evidence=IPI

GO:0009506 "plasmodesma" evidence=IDA

GO:0046777 "protein autophosphorylation" evidence=RCA

TAIR|locus:2131684 AT4G27290 [Arabidopsis thaliana (taxid:3702)]

 Score = 192 (72.6 bits), Expect = 1.1e-36, Sum P(4) = 1.1e-36
 Identities = 42/64 (65%), Positives = 49/64 (76%)

Query:   232 ILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEINPNISDFGPARIFG-DQTEEVTGR 290
             I+ GIAR +LYL EDSRL IIHRD K SNVLLD+++N  ISDFG AR  G D+TE  T R
Sbjct:   567 IIKGIARGMLYLHEDSRLRIIHRDLKASNVLLDSDMNAKISDFGLARTLGGDETEANTTR 626

Query:   291 VIGT 294
             V+GT
Sbjct:   627 VVGT 630

GO:0004672 "protein kinase activity" evidence=IEA;ISS

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0030246 "carbohydrate binding" evidence=IEA

GO:0048544 "recognition of pollen" evidence=IEA

GO:0048765 "root hair cell differentiation" evidence=RCA

TAIR|locus:2200151 SD1-13 "S-domain-1 13" [Arabidopsis thaliana (taxid:3702)]

 Score = 191 (72.3 bits), Expect = 2.1e-34, Sum P(3) = 2.1e-34
 Identities = 40/65 (61%), Positives = 49/65 (75%)

Query:   231 NILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEINPNISDFGPARIF-GDQTEEVTG 289
             NI+ GI R ++YL  DSRL+IIHRD K SN+LLD  +NP ISDFG ARIF G++ E  T 
Sbjct:   613 NIIDGICRGLMYLHRDSRLKIIHRDLKASNILLDENLNPKISDFGLARIFQGNEDEVSTV 672

Query:   290 RVIGT 294
             RV+GT
Sbjct:   673 RVVGT 677

GO:0004672 "protein kinase activity" evidence=IEA;IDA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA;IDA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0030246 "carbohydrate binding" evidence=IEA

GO:0048544 "recognition of pollen" evidence=IEA

GO:0046777 "protein autophosphorylation" evidence=RCA;IDA

GO:0009637 "response to blue light" evidence=RCA

GO:0010155 "regulation of proton transport" evidence=RCA

GO:0016556 "mRNA modification" evidence=RCA

TAIR|locus:2200908 AT1G61610 [Arabidopsis thaliana (taxid:3702)]

 Score = 197 (74.4 bits), Expect = 2.8e-34, Sum P(3) = 2.8e-34
 Identities = 50/102 (49%), Positives = 64/102 (62%)

Query:   198 DGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTN----ILYGIARVILYLPEDSRLEIIH 253
             D E  L++E   +P+KS     F+ SK  S        ++ GIAR +LYL  DSRL+IIH
Sbjct:   591 DNEKMLLYE--YMPNKSLDRFLFDESKQGSLDWRKRWEVIGGIARGLLYLHRDSRLKIIH 648

Query:   254 RDHKTSNVLLDAEINPNISDFGPARIFGDQTEEV-TGRVIGT 294
             RD K SN+LLD E+NP ISDFG ARIF  + +   T RV+GT
Sbjct:   649 RDLKASNILLDTEMNPKISDFGMARIFNYRQDHANTIRVVGT 690

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0030246 "carbohydrate binding" evidence=IEA;ISS

GO:0048544 "recognition of pollen" evidence=IEA

GO:0009693 "ethylene biosynthetic process" evidence=RCA

TAIR|locus:2141176 B120 [Arabidopsis thaliana (taxid:3702)]

 Score = 210 (79.0 bits), Expect = 2.9e-33, Sum P(3) = 2.9e-33
 Identities = 55/105 (52%), Positives = 69/105 (65%)

Query:   196 CGDGEV-FLMFEGIKLPDKSEFTCEFECSKYS----SYVTNILYGIARVILYLPEDSRLE 250
             C +GE   L++E   +P+KS     F+ +K +        +I+ GIAR +LYL  DSRL 
Sbjct:   592 CFEGEEKMLVYE--YMPNKSLDFFLFDETKQALIDWKLRFSIIEGIARGLLYLHRDSRLR 649

Query:   251 IIHRDHKTSNVLLDAEINPNISDFGPARIFG-DQTEEVTGRVIGT 294
             IIHRD K SNVLLDAE+NP ISDFG ARIFG +Q E  T RV+GT
Sbjct:   650 IIHRDLKVSNVLLDAEMNPKISDFGMARIFGGNQNEANTVRVVGT 694

GO:0004672 "protein kinase activity" evidence=IEA;ISS

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0030246 "carbohydrate binding" evidence=IEA;ISS

GO:0048544 "recognition of pollen" evidence=IEA

GO:0002679 "respiratory burst involved in defense response" evidence=RCA

GO:0006612 "protein targeting to membrane" evidence=RCA

GO:0006944 "cellular membrane fusion" evidence=RCA

GO:0006979 "response to oxidative stress" evidence=RCA

GO:0009611 "response to wounding" evidence=RCA

GO:0009863 "salicylic acid mediated signaling pathway" evidence=RCA

GO:0010200 "response to chitin" evidence=RCA

GO:0010363 "regulation of plant-type hypersensitive response" evidence=RCA

GO:0043069 "negative regulation of programmed cell death" evidence=RCA

GO:0050832 "defense response to fungus" evidence=RCA

TAIR|locus:2197664 AT1G61490 [Arabidopsis thaliana (taxid:3702)]

 Score = 192 (72.6 bits), Expect = 1.3e-29, Sum P(3) = 1.3e-29
 Identities = 54/123 (43%), Positives = 74/123 (60%)

Query:   196 CGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVT----NILYGIARVILYLPEDSRLEI 251
             C +GE  L+     L +KS  T  F+  K          +I+ GIAR +LYL  DSRL++
Sbjct:   553 CIEGEEKLLIYEFML-NKSLDTFVFDARKKLEVDWPKRFDIVQGIARGLLYLHRDSRLKV 611

Query:   252 IHRDHKTSNVLLDAEINPNISDFGPARIF-GDQTEEVTGRVIGTQTLKTVPELLQAWK-L 309
             IHRD K SN+LLD ++NP ISDFG AR++ G Q ++ T RV+GT    + PE   AW  +
Sbjct:   612 IHRDLKVSNILLDEKMNPKISDFGLARMYEGTQCQDKTRRVVGTLGYMS-PEY--AWTGV 668

Query:   310 WSE 312
             +SE
Sbjct:   669 FSE 671

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0030246 "carbohydrate binding" evidence=IEA;ISS

GO:0048544 "recognition of pollen" evidence=IEA

TAIR|locus:2093397 CES101 "CALLUS EXPRESSION OF RBCS 101" [Arabidopsis thaliana (taxid:3702)]

 Score = 169 (64.5 bits), Expect = 9.7e-29, Sum P(3) = 9.7e-29
 Identities = 36/64 (56%), Positives = 46/64 (71%)

Query:   232 ILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEINPNISDFGPARIFGDQTEEV-TGR 290
             I+ GI + +LYL + SRL++IHRD K  N+LLD ++NP ISDFG ARIFG Q  +  T R
Sbjct:   629 IMEGIIQGLLYLHKYSRLKVIHRDIKAGNILLDEDMNPKISDFGMARIFGAQESKANTKR 688

Query:   291 VIGT 294
             V GT
Sbjct:   689 VAGT 692

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0030246 "carbohydrate binding" evidence=IEA;ISS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	2.7.11	LOW CONFIDENCE prediction!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: GSVIVG00010705001 SubName- Full=Chromosome undetermined scaffold_278, whole genome shotgun sequence; (832 aa) (Vitis vinifera)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	392
pfam01453	109	pfam01453, B_lectin, D-mannose binding lectin	4e-16
cd00028	116	cd00028, B_lectin, Bulb-type mannose-specific lect	6e-12
smart00108	114	smart00108, B_lectin, Bulb-type mannose-specific l	3e-10
cd07852	337	cd07852, STKc_MAPK15, Catalytic domain of the Seri	8e-07
cd00180	215	cd00180, PKc, Catalytic domain of Protein Kinases	9e-07
pfam00069	260	pfam00069, Pkinase, Protein kinase domain	3e-06
cd07840	287	cd07840, STKc_CDK9_like, Catalytic domain of Cycli	7e-06
cd06623	264	cd06623, PKc_MAPKK_plant_like, Catalytic domain of	2e-05
cd05118	283	cd05118, STKc_CMGC, Catalytic domain of CMGC famil	2e-05
cd08215	258	cd08215, STKc_Nek, Catalytic domain of the Protein	3e-05
cd08529	256	cd08529, STKc_FA2-like, Catalytic domain of the Pr	5e-05
cd06606	260	cd06606, STKc_MAPKKK, Catalytic domain of the Prot	6e-05
PLN00034	353	PLN00034, PLN00034, mitogen-activated protein kina	6e-05
cd07841	298	cd07841, STKc_CDK7, Catalytic domain of the Serine	7e-05
cd07856	328	cd07856, STKc_Sty1_Hog1, Catalytic domain of the S	7e-05
cd06627	254	cd06627, STKc_Cdc7_like, Catalytic domain of Cell	7e-05
PLN00009	294	PLN00009, PLN00009, cyclin-dependent kinase A; Pro	9e-05
cd05583	288	cd05583, STKc_MSK_N, N-terminal catalytic domain o	1e-04
cd07843	293	cd07843, STKc_CDC2L1, Catalytic domain of the Seri	1e-04
cd07866	311	cd07866, STKc_BUR1, Catalytic domain of the Serine	2e-04
cd07829	282	cd07829, STKc_CDK_like, Catalytic domain of Cyclin	2e-04
cd07834	330	cd07834, STKc_MAPK, Catalytic domain of the Serine	3e-04
cd06612	256	cd06612, STKc_MST1_2, Catalytic domain of the Prot	3e-04
cd07853	372	cd07853, STKc_NLK, Catalytic domain of the Serine/	3e-04
cd06629	272	cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain o	3e-04
cd05577	277	cd05577, STKc_GRK, Catalytic domain of the Protein	4e-04
cd05123	250	cd05123, STKc_AGC, Catalytic domain of AGC family	5e-04
smart00219	257	smart00219, TyrKc, Tyrosine kinase, catalytic doma	6e-04
cd05614	332	cd05614, STKc_MSK2_N, N-terminal catalytic domain	6e-04
cd05033	266	cd05033, PTKc_EphR, Catalytic domain of Ephrin Rec	6e-04
cd07832	286	cd07832, STKc_CCRK, Catalytic domain of the Serine	6e-04
cd07845	309	cd07845, STKc_CDK10, Catalytic domain of the Serin	6e-04
smart00221	258	smart00221, STYKc, Protein kinase; unclassified sp	7e-04
cd08220	256	cd08220, STKc_Nek8, Catalytic domain of the Protei	7e-04
cd07835	283	cd07835, STKc_CDK1_like, Catalytic domain of Cycli	7e-04
cd00192	262	cd00192, PTKc, Catalytic domain of Protein Tyrosin	7e-04
cd05038	284	cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domai	8e-04
cd07877	345	cd07877, STKc_p38alpha_MAPK14, Catalytic domain of	0.001
cd05581	280	cd05581, STKc_PDK1, Catalytic domain of the Protei	0.001
cd06616	288	cd06616, PKc_MKK4, Catalytic domain of the dual-sp	0.001
smart00220	254	smart00220, S_TKc, Serine/Threonine protein kinase	0.001
cd07855	334	cd07855, STKc_ERK5, Catalytic domain of the Serine	0.001
cd05608	280	cd05608, STKc_GRK1, Catalytic domain of the Protei	0.001
cd05066	267	cd05066, PTKc_EphR_A, Catalytic domain of the Prot	0.001
cd07865	310	cd07865, STKc_CDK9, Catalytic domain of the Serine	0.001
cd06617	283	cd06617, PKc_MKK3_6, Catalytic domain of the dual-	0.001
cd07880	343	cd07880, STKc_p38gamma_MAPK12, Catalytic domain of	0.002
cd07878	343	cd07878, STKc_p38beta_MAPK11, Catalytic domain of	0.002
cd07879	342	cd07879, STKc_p38delta_MAPK13, Catalytic domain of	0.002
cd08217	265	cd08217, STKc_Nek2, Catalytic domain of the Protei	0.002
cd05578	258	cd05578, STKc_Yank1, Catalytic domain of the Prote	0.002
cd07849	336	cd07849, STKc_ERK1_2_like, Catalytic domain of Ext	0.002
COG0515	384	COG0515, SPS1, Serine/threonine protein kinase [Ge	0.002
PTZ00263	329	PTZ00263, PTZ00263, protein kinase A catalytic sub	0.002
cd05063	268	cd05063, PTKc_EphR_A2, Catalytic domain of the Pro	0.002
cd06605	265	cd06605, PKc_MAPKK, Catalytic domain of the dual-s	0.002
cd07860	284	cd07860, STKc_CDK2_3, Catalytic domain of the Seri	0.003
cd06625	263	cd06625, STKc_MEKK3_like, Catalytic domain of MAP/	0.003
cd07858	337	cd07858, STKc_TEY_MAPK_plant, Catalytic domain of	0.003
cd05597	331	cd05597, STKc_DMPK_like, Catalytic domain of Myoto	0.003
cd05587	324	cd05587, STKc_cPKC, Catalytic domain of the Protei	0.004
cd08221	256	cd08221, STKc_Nek9, Catalytic domain of the Protei	0.004

>gnl|CDD|216511 pfam01453, B_lectin, D-mannose binding lectin

 Score = 73.5 bits (181), Expect = 4e-16
 Identities = 33/106 (31%), Positives = 48/106 (45%), Gaps = 17/106 (16%)

Query: 66  LVIWVANRNGSINS-----------NLS-QDNDLGIIWNVILPRATGSPALQLLVAGNLV 113
            V+WVANR   +             NL   D +  ++W+             L   GNLV
Sbjct: 3   TVVWVANRLNPLTDSSYTLILQSDGNLVLYDGNGRVVWSSNTSGKGSGCVAVLQDDGNLV 62

Query: 114 LREFSLSHSEGYLWESFDSPSDTILPGMKRGMNLRTGWNQNIKAWN 159
           L      +S   LW+SFD P+DT+LPG K G N+  G ++ + +W 
Sbjct: 63  LY----DNSGKVLWQSFDHPTDTLLPGQKDG-NVVIGGSRRLTSWK 103

These proteins include mannose-specific lectins from plants as well as bacteriocins from bacteria. Length = 109

>gnl|CDD|237995 cd00028, B_lectin, Bulb-type mannose-specific lectin

 Score = 61.9 bits (151), Expect = 6e-12
 Identities = 36/118 (30%), Positives = 50/118 (42%), Gaps = 21/118 (17%)

Query: 33  ILLAPSTLWGGNSL------IPGNSSQSFLVISYKNLPPLVIWVANRNGSINSN----LS 82
            L +  TL    SL           S+ + +I YK     V+WVANR+    S+    L 
Sbjct: 3   PLSSGQTLVSSGSLFELGFFKLIMQSRDYNLILYKGSSRTVVWVANRDNPSGSSCTLTLQ 62

Query: 83  QDNDL-------GIIWNVILPRATGSPALQLLVAGNLVLREFSLSHSEGYLWESFDSP 133
            D +L        ++W+    R  G+  L LL  GNLVL          +LW+SFD P
Sbjct: 63  SDGNLVIYDGSGTVVWSSNTTRVNGNYVLVLLDDGNLVLY----DSDGNFLWQSFDYP 116

The domain contains a three-fold internal repeat (beta-prism architecture). The consensus sequence motif QXDXNXVXY is involved in alpha-D-mannose recognition. Lectins are carbohydrate-binding proteins which specifically recognize diverse carbohydrates and mediate a wide variety of biological processes, such as cell-cell and host-pathogen interactions, serum glycoprotein turnover, and innate immune responses. Length = 116

>gnl|CDD|214519 smart00108, B_lectin, Bulb-type mannose-specific lectin

 Score = 56.9 bits (138), Expect = 3e-10
 Identities = 35/118 (29%), Positives = 52/118 (44%), Gaps = 22/118 (18%)

Query: 31  RDILLAPSTLWGGNSL------IPGNSSQSFLVISYKNLPPLVIWVANRNGSINSN---- 80
            + L +  TL  GNSL           +   L I YK+    V+WVANR+  ++ +    
Sbjct: 1   SNTLSSGQTLVSGNSLFELGFFTLIMQNDYNL-ILYKSSSRTVVWVANRDNPVSDSCTLT 59

Query: 81  LSQDNDLGI-------IWNVILPRATGSPALQLLVAGNLVLREFSLSHSEGYLWESFD 131
           L  D +L +       +W+     A G+  L LL  GNLV+          +LW+SFD
Sbjct: 60  LQSDGNLVLYDGDGRVVWSSNTTGANGNYVLVLLDDGNLVIY----DSDGNFLWQSFD 113

Length = 114

>gnl|CDD|173747 cd07852, STKc_MAPK15, Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

 Score = 49.9 bits (120), Expect = 8e-07
 Identities = 27/89 (30%), Positives = 46/89 (51%), Gaps = 8/89 (8%)

Query: 232 ILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEINPNISDFGPARIFGDQTEEVTGRV 291
           I+Y + + + Y+   S   +IHRD K SN+LL+++    ++DFG AR   +  E     V
Sbjct: 112 IMYQLLKALKYI--HSG-NVIHRDLKPSNILLNSDCRVKLADFGLARSLSELEENPENPV 168

Query: 292 IGTQTLKT----VPELLQAWKLWSEGDPM 316
           + T  + T     PE+L     +++G  M
Sbjct: 169 L-TDYVATRWYRAPEILLGSTRYTKGVDM 196

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimuli whereas ERK8 shows low basal activity and is activated by DNA-damaging agents. ERK7 and ERK8 also have different substrate profiles. Genome analysis shows that they are orthologs with similar gene structures. ERK7 and ERK 8 may be involved in the signaling of some nuclear receptor transcription factors. ERK7 regulates hormone-dependent degradation of estrogen receptor alpha while ERK8 down-regulates the transcriptional co-activation androgen and glucocorticoid receptors. Length = 337

>gnl|CDD|173623 cd00180, PKc, Catalytic domain of Protein Kinases

 Score = 48.8 bits (117), Expect = 9e-07
 Identities = 25/84 (29%), Positives = 37/84 (44%), Gaps = 8/84 (9%)

Query: 231 NILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDA-EINPNISDFGPARIFGDQTEEVTG 289
            IL  I   + YL       IIHRD K  N+LLD+      ++DFG +++       +  
Sbjct: 96  RILLQILEGLEYL---HSNGIIHRDLKPENILLDSDNGKVKLADFGLSKLLTSDKSLLKT 152

Query: 290 RVIGTQTLKTV-PELLQAWKLWSE 312
            V    T   + PE+L     +SE
Sbjct: 153 IV---GTPAYMAPEVLLGKGYYSE 173

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which one kinase activates a second kinase, which in turn, may act on other kinases; this sequential action transmits a signal from the cell surface to target proteins, which results in cellular responses. The PK family is one of the largest known protein families with more than 100 homologous yeast enzymes and 550 human proteins. A fraction of PK family members are pseudokinases that lack crucial residues for catalytic activity. The mutiplicity of kinases allows for specific regulation according to substrate, tissue distribution, and cellular localization. PKs regulate many cellular processes including proliferation, division, differentiation, motility, survival, metabolism, cell-cycle progression, cytoskeletal rearrangement, immunity, and neuronal functions. Many kinases are implicated in the development of various human diseases including different types of cancer. Length = 215

>gnl|CDD|215690 pfam00069, Pkinase, Protein kinase domain

 Score = 48.0 bits (115), Expect = 3e-06
 Identities = 24/64 (37%), Positives = 31/64 (48%), Gaps = 4/64 (6%)

Query: 231 NILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEINPNISDFGPARIFGDQTEEVTGR 290
            I   I R + YL  +    IIHRD K  N+LLD      I+DFG A+     +  +T  
Sbjct: 102 KIALQILRGLEYLHSNG---IIHRDLKPENILLDENGVVKIADFGLAKKLLKSSSSLTTF 158

Query: 291 VIGT 294
           V GT
Sbjct: 159 V-GT 161

Length = 260

>gnl|CDD|143345 cd07840, STKc_CDK9_like, Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

 Score = 47.2 bits (113), Expect = 7e-06
 Identities = 23/56 (41%), Positives = 33/56 (58%), Gaps = 5/56 (8%)

Query: 251 IIHRDHKTSNVLLDAEINPNISDFGPARIF-GDQTEEVTGRVIGTQTL-KTVPELL 304
           I+HRD K SN+L++ +    ++DFG AR +    + + T RVI   TL    PELL
Sbjct: 121 ILHRDIKGSNILINNDGVLKLADFGLARPYTKRNSADYTNRVI---TLWYRPPELL 173

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA polymerase II and participate in regulating mutliple steps of gene expression including transcription elongation and RNA processing. CDK9 and CdkC associate with T-type cyclins while BUR1 associates with the cyclin BUR2. CDK12 is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 interacts with cyclins L1 and L2, and participates in regulating transcription and alternative splicing. Length = 287

>gnl|CDD|132954 cd06623, PKc_MAPKK_plant_like, Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

 Score = 45.7 bits (109), Expect = 2e-05
 Identities = 25/70 (35%), Positives = 40/70 (57%), Gaps = 7/70 (10%)

Query: 231 NILYGIARVIL----YLPEDSRLEIIHRDHKTSNVLLDAEINPNISDFGPARIFGDQTEE 286
            +L  IAR IL    YL   ++  IIHRD K SN+L++++    I+DFG +++  + T +
Sbjct: 99  PVLAYIARQILKGLDYL--HTKRHIIHRDIKPSNLLINSKGEVKIADFGISKVL-ENTLD 155

Query: 287 VTGRVIGTQT 296
                +GT T
Sbjct: 156 QCNTFVGTVT 165

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include MAPKKs from plants, kinetoplastids, alveolates, and mycetozoa. The MAPKK, LmxPK4, from Leishmania mexicana, is important in differentiation and virulence. Dictyostelium discoideum MEK1 is required for proper chemotaxis. MEK1 null mutants display severe defects in cell polarization and directional movement. Plants contain multiple MAPKKs like other eukaryotes. The Arabidopsis genome encodes for 10 MAPKKs while poplar and rice contain 13 MAPKKs each. The functions of these proteins have not been fully elucidated. There is evidence to suggest that MAPK cascades are involved in plant stress responses. In Arabidopsis, MKK3 plays a role in pathogen signaling, MKK2 is involved in cold and salt stress signaling, MKK4/MKK5 participates in innate immunity, and MKK7 regulates basal and systemic acquired resistance. Length = 264

>gnl|CDD|143333 cd05118, STKc_CMGC, Catalytic domain of CMGC family Serine/Threonine Kinases

 Score = 45.4 bits (108), Expect = 2e-05
 Identities = 44/171 (25%), Positives = 63/171 (36%), Gaps = 29/171 (16%)

Query: 227 SYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEINPNISDFGPARIFGDQ--- 283
           S + + LY + + + +        I+HRD K  N+L++ E    ++DFG AR FG     
Sbjct: 98  SLIKSYLYQLLQGLAFC---HSHGILHRDLKPENLLINTEGVLKLADFGLARSFGSPVRP 154

Query: 284 -TEEVTGRVIGTQTLKTVPELL-------QAWKLWSEGDPM-EIIDEQTKMKGPFSADEL 334
            T  V  R          PELL           +WS G    E++  +    G    D+L
Sbjct: 155 YTHYVVTR------WYRAPELLLGDKGYSTPVDIWSVGCIFAELLSRRPLFPGKSEIDQL 208

Query: 335 VKCIEV-GLLCVQQRIEDWPTMSSVLTMLSNESI--KVPQPEEVCFATSSS 382
            K     G        E WP  +S L      S   K   P    F  +S 
Sbjct: 209 FKIFRTLGTPDP----EVWPKFTS-LARNYKFSFPKKAGMPLPKLFPNASP 254

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Length = 283

>gnl|CDD|173755 cd08215, STKc_Nek, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

 Score = 44.8 bits (107), Expect = 3e-05
 Identities = 14/44 (31%), Positives = 24/44 (54%), Gaps = 1/44 (2%)

Query: 251 IIHRDHKTSNVLLDAEINPNISDFGPARIFGDQTEEVTGRVIGT 294
           I+HRD K  N+ L +     + DFG +++    T ++   V+GT
Sbjct: 124 ILHRDIKPQNIFLTSNGLVKLGDFGISKVL-SSTVDLAKTVVGT 166

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Length = 258

>gnl|CDD|173771 cd08529, STKc_FA2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

 Score = 44.0 bits (104), Expect = 5e-05
 Identities = 16/35 (45%), Positives = 22/35 (62%)

Query: 250 EIIHRDHKTSNVLLDAEINPNISDFGPARIFGDQT 284
           +I+HRD K+ N+ LDA  N  I D G A++  D T
Sbjct: 121 KILHRDIKSLNLFLDAYDNVKIGDLGVAKLLSDNT 155

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cycle progression. No cellular function has yet been ascribed to CNK4. Length = 256

>gnl|CDD|173724 cd06606, STKc_MAPKKK, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

 Score = 44.1 bits (105), Expect = 6e-05
 Identities = 28/69 (40%), Positives = 40/69 (57%), Gaps = 8/69 (11%)

Query: 227 SYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEINPNISDFGPARIFGD-QTE 285
            Y   IL G+A    YL  +    I+HRD K +N+L+D++    ++DFG A+  GD +T 
Sbjct: 105 KYTRQILEGLA----YLHSNG---IVHRDIKGANILVDSDGVVKLADFGCAKRLGDIETG 157

Query: 286 EVTGRVIGT 294
           E TG V GT
Sbjct: 158 EGTGSVRGT 166

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKKK5) and ASK2 (or MAPKKK6), MEKK1, MEKK2, MEKK3, MEKK4, as well as plant and fungal MAPKKKs. Also included in this subfamily are the cell division control proteins Schizosaccharomyces pombe Cdc7 and Saccharomyces cerevisiae Cdc15. Length = 260

>gnl|CDD|215036 PLN00034, PLN00034, mitogen-activated protein kinase kinase; Provisional

 Score = 44.4 bits (105), Expect = 6e-05
 Identities = 27/63 (42%), Positives = 36/63 (57%), Gaps = 8/63 (12%)

Query: 232 ILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEINPNISDFGPARIFGDQTEEVTGRV 291
           IL GIA    YL    R  I+HRD K SN+L+++  N  I+DFG +RI   QT +     
Sbjct: 177 ILSGIA----YL---HRRHIVHRDIKPSNLLINSAKNVKIADFGVSRILA-QTMDPCNSS 228

Query: 292 IGT 294
           +GT
Sbjct: 229 VGT 231

Length = 353

>gnl|CDD|143346 cd07841, STKc_CDK7, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

 Score = 44.1 bits (105), Expect = 7e-05
 Identities = 21/58 (36%), Positives = 33/58 (56%), Gaps = 10/58 (17%)

Query: 251 IIHRDHKTSNVLLDAEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTV----PELL 304
           I+HRD K +N+L+ ++    ++DFG AR FG    ++T +V+      T     PELL
Sbjct: 123 ILHRDLKPNNLLIASDGVLKLADFGLARSFGSPNRKMTHQVV------TRWYRAPELL 174

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is also a component of the general transcription factor TFIIH, which phosphorylates the C-terminal domain (CTD) of RNA polymerase II when it is bound with unphosphorylated DNA, as present in the pre-initiation complex. Following phosphorylation, the CTD dissociates from the DNA which allows transcription initiation. Length = 298

>gnl|CDD|143361 cd07856, STKc_Sty1_Hog1, Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1

 Score = 44.0 bits (104), Expect = 7e-05
 Identities = 30/93 (32%), Positives = 48/93 (51%), Gaps = 15/93 (16%)

Query: 228 YVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEINPNISDFGPARIFGDQTEEV 287
           ++   LY I R + Y+       ++HRD K SN+L++   +  I DFG ARI   Q  ++
Sbjct: 109 FIQYFLYQILRGLKYVHSAG---VVHRDLKPSNILINENCDLKICDFGLARI---QDPQM 162

Query: 288 TGRVIGTQTLKTVPELLQAWK-------LWSEG 313
           TG V  T+  +  PE++  W+       +WS G
Sbjct: 163 TGYV-STRYYRA-PEIMLTWQKYDVEVDIWSAG 193

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and UV radiation. Sty1 is regulated by the MAP2K Wis1, which is activated by the MAP3Ks Wis4 and Win1, which receive signals of the stress condition from membrane-spanning histidine kinases Mak1-3. Activated Sty1 stabilizes the Atf1 transcription factor and induces transcription of Atf1-dependent genes of the core environmetal stress response (CESR). Hog1 is the key element in the high osmolarity glycerol (HOG) pathway and is activated upon hyperosmotic stress. Activated Hog1 accumulates in the nucleus and regulates stress-induced transcription. The HOG pathway is mediated by two transmembrane osmosensors, Sln1 and Sho1. Length = 328

>gnl|CDD|173731 cd06627, STKc_Cdc7_like, Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

 Score = 43.8 bits (104), Expect = 7e-05
 Identities = 23/69 (33%), Positives = 36/69 (52%), Gaps = 8/69 (11%)

Query: 226 SSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEINPNISDFGPARIFGDQTE 285
           + YV  +L G+A    YL E     +IHRD K +N+L   +    ++DFG A    D ++
Sbjct: 102 AVYVYQVLQGLA----YLHEQG---VIHRDIKAANILTTKDGVVKLADFGVATKLNDVSK 154

Query: 286 EVTGRVIGT 294
           +    V+GT
Sbjct: 155 DDAS-VVGT 162

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Cdc7 is essential for cell division by playing a key role in the initiation of septum formation and cytokinesis. Budding yeast Cdc15 functions to coordinate mitotic exit with cytokinesis. Arabidopsis MAPKKK epsilon is required for pollen development in the plasma membrane. Length = 254

>gnl|CDD|177649 PLN00009, PLN00009, cyclin-dependent kinase A; Provisional

 Score = 43.7 bits (103), Expect = 9e-05
 Identities = 44/149 (29%), Positives = 67/149 (44%), Gaps = 16/149 (10%)

Query: 198 DGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHK 257
           +  ++L+FE + L  K       + +K    +   LY I R I Y    S   ++HRD K
Sbjct: 73  EKRLYLVFEYLDLDLKKHMDSSPDFAKNPRLIKTYLYQILRGIAYC--HSH-RVLHRDLK 129

Query: 258 TSNVLLDAEINP-NISDFGPARIFGDQTEEVTGRVIGTQTL-KTVPELLQAWK------- 308
             N+L+D   N   ++DFG AR FG      T  V+   TL    PE+L   +       
Sbjct: 130 PQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVV---TLWYRAPEILLGSRHYSTPVD 186

Query: 309 LWSEGDPM-EIIDEQTKMKGPFSADELVK 336
           +WS G    E+++++    G    DEL K
Sbjct: 187 IWSVGCIFAEMVNQKPLFPGDSEIDELFK 215

Length = 294

>gnl|CDD|173674 cd05583, STKc_MSK_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

 Score = 43.2 bits (102), Expect = 1e-04
 Identities = 23/59 (38%), Positives = 35/59 (59%)

Query: 236 IARVILYLPEDSRLEIIHRDHKTSNVLLDAEINPNISDFGPARIFGDQTEEVTGRVIGT 294
           IA ++L L    +L II+RD K  N+LLD+E +  ++DFG ++ F  + EE      GT
Sbjct: 111 IAEIVLALDHLHQLGIIYRDIKLENILLDSEGHVVLTDFGLSKEFLAEEEERAYSFCGT 169

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines. This triggers phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) in the C-terminal extension of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSKs are predominantly nuclear proteins. They are widely expressed in many tissues including heart, brain, lung, liver, kidney, and pancreas. There are two isoforms of MSK, called MSK1 and MSK2. Length = 288

>gnl|CDD|173741 cd07843, STKc_CDC2L1, Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1

 Score = 43.0 bits (102), Expect = 1e-04
 Identities = 29/71 (40%), Positives = 36/71 (50%), Gaps = 11/71 (15%)

Query: 251 IIHRDHKTSNVLLDAEINPNISDFGPARIFGDQTEEVTGRVIGTQTL-KTVPELL----- 304
           I+HRD KTSN+LL+      I DFG AR +G   +  T  V+   TL    PELL     
Sbjct: 127 ILHRDLKTSNLLLNNRGILKICDFGLAREYGSPLKPYTQLVV---TLWYRAPELLLGAKE 183

Query: 305 --QAWKLWSEG 313
              A  +WS G
Sbjct: 184 YSTAIDMWSVG 194

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the major isoform, associates with cyclin L and is expressed throughout the cell cycle. It is involved in RNA processing and the regulation of transcription. CDK11(p58) associates with cyclin D3 and is expressed during the G2/M phase of the cell cycle. It plays roles in spindle morphogenesis, centrosome maturation, sister chromatid cohesion, and the completion of mitosis. CDK11(p46) is formed from the larger isoforms by caspases during TNFalpha- and Fas-induced apoptosis. It functions as a downstream effector kinase in apoptotic signaling pathways and interacts with eukaryotic initiation factor 3f (eIF3f), p21-activated kinase (PAK1), and Ran-binding protein (RanBPM). Length = 293

>gnl|CDD|143371 cd07866, STKc_BUR1, Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

 Score = 42.7 bits (101), Expect = 2e-04
 Identities = 33/112 (29%), Positives = 50/112 (44%), Gaps = 27/112 (24%)

Query: 220 FECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEINPNISDFGPARI 279
              S+   Y+  +L GI     YL E+    I+HRD K +N+L+D +    I+DFG AR 
Sbjct: 112 LTESQIKCYMLQLLEGIN----YLHEN---HILHRDIKAANILIDNQGILKIADFGLARP 164

Query: 280 F-----------GDQTEEVTGRVIGTQTLKTVPELLQAWK-------LWSEG 313
           +           G  T + T  V+ T+  +  PELL   +       +W  G
Sbjct: 165 YDGPPPNPKGGGGGGTRKYTNLVV-TRWYRP-PELLLGERRYTTAVDIWGIG 214

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic screen as factors involved in general transcription. The BUR1/BUR2 complex phosphorylates the C-terminal domain of RNA polymerase II. In addition, this complex regulates histone modification by phosporylating Rad6 and mediating the association of the Paf1 complex with chromatin. Length = 311

>gnl|CDD|173733 cd07829, STKc_CDK_like, Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

 Score = 42.1 bits (100), Expect = 2e-04
 Identities = 19/55 (34%), Positives = 32/55 (58%), Gaps = 3/55 (5%)

Query: 227 SYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEINPNISDFGPARIFG 281
           + + +I+Y + R + Y    S   I+HRD K  N+L++ +    ++DFG AR FG
Sbjct: 98  NLIKSIMYQLLRGLAYC--HSH-RILHRDLKPQNILINRDGVLKLADFGLARAFG 149

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the early G1 phase by CDK4 or CDK6, the G1/S phase transition by CDK2, or the entry of mitosis by CDK1. They also exhibit overlapping cyclin specificity and functions in certain conditions. Knockout mice with a single CDK deleted remain viable with specific phenotypes, showing that some CDKs can compensate for each other. For example, CDK4 can compensate for the loss of CDK6, however, double knockout mice with both CDK4 and CDK6 deleted die in utero. CDK8 and CDK9 are mainly involved in transcription while CDK5 is implicated in neuronal function. CDK7 plays essential roles in both the cell cycle as a CDK-Activating Kinase (CAK) and in transcription as a component of the general transcription factor TFIIH. Length = 282

>gnl|CDD|173737 cd07834, STKc_MAPK, Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

 Score = 42.1 bits (100), Expect = 3e-04
 Identities = 18/47 (38%), Positives = 24/47 (51%), Gaps = 7/47 (14%)

Query: 251 IIHRDHKTSNVLLDAEINPNISDFGPARIFGDQ-------TEEVTGR 290
           +IHRD K SN+L+++  +  I DFG AR            TE V  R
Sbjct: 124 VIHRDLKPSNILVNSNCDLKICDFGLARGVDPDEDEKGFLTEYVVTR 170

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPK kinase (MAP2K or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAP3K or MKKK). Each cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. There are three main typical MAPK subfamilies: Extracellular signal-Regulated Kinase (ERK), c-Jun N-terminal Kinase (JNK), and p38. Some MAPKs are atypical in that they are not regulated by MAP2Ks. These include MAPK4, MAPK6, NLK, and ERK7. Length = 330

>gnl|CDD|132943 cd06612, STKc_MST1_2, Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

 Score = 41.9 bits (99), Expect = 3e-04
 Identities = 22/63 (34%), Positives = 31/63 (49%), Gaps = 4/63 (6%)

Query: 232 ILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEINPNISDFGPARIFGDQTEEVTGRV 291
           ILY   + + YL      + IHRD K  N+LL+ E    ++DFG +    D   +    V
Sbjct: 104 ILYQTLKGLEYL---HSNKKIHRDIKAGNILLNEEGQAKLADFGVSGQLTDTMAK-RNTV 159

Query: 292 IGT 294
           IGT
Sbjct: 160 IGT 162

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a MAPK kinase) and MEKK1 (a MAPK kinase kinase) by acting as a MAPK kinase kinase kinase (MAPKKKK). Activation of JNK by MST1 leads to caspase activation and apoptosis. MST1 has also been implicated in cell proliferation and differentiation. Krs1 may regulate cell growth arrest and apoptosis in response to cellular stress. Length = 256

>gnl|CDD|173748 cd07853, STKc_NLK, Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase

 Score = 42.0 bits (99), Expect = 3e-04
 Identities = 33/96 (34%), Positives = 49/96 (51%), Gaps = 13/96 (13%)

Query: 226 SSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEINPNISDFGPARIFG-DQT 284
           S +V   LY I R + YL       I+HRD K  N+L+++     I DFG AR+   D++
Sbjct: 102 SDHVKVFLYQILRGLKYL---HSAGILHRDIKPGNLLVNSNCVLKICDFGLARVEEPDES 158

Query: 285 EEVTGRVIGTQTLKTVPELL-------QAWKLWSEG 313
           + +T  V+ TQ  +  PE+L        A  +WS G
Sbjct: 159 KHMTQEVV-TQYYRA-PEILMGSRHYTSAVDIWSVG 192

Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription factors from the TCF/LEF family, inhibiting their ability to activate the transcription of target genes. In prostate cancer cells, NLK is involved in regulating androgen receptor-mediated transcription and its expression is altered during cancer progression. Length = 372

>gnl|CDD|132960 cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

 Score = 41.7 bits (98), Expect = 3e-04
 Identities = 31/131 (23%), Positives = 58/131 (44%), Gaps = 26/131 (19%)

Query: 220 FECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEINPNISDFGPARI 279
           FE      +   +L G+A    YL       I+HRD K  N+L+DA+    ISDFG ++ 
Sbjct: 105 FEEQLVRFFTEQVLEGLA----YLHSKG---ILHRDLKADNLLVDADGICKISDFGISK- 156

Query: 280 FGDQTEEVTGRVIGTQTLKTV----PELLQAWK--------LWSEGDPMEIIDEQTKMKG 327
              +++++           +V    PE++ ++         +WS G    ++ E    + 
Sbjct: 157 ---KSDDIYDNDQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGC---VVLEMFAGRR 210

Query: 328 PFSADELVKCI 338
           P+S +E +  +
Sbjct: 211 PWSDEEAIAAM 221

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell integrity MAPK pathway, which is activated by stresses and aggressions to the cell wall. The MAPKKK Bck1, MAPKKs Mkk1 and Mkk2, and the MAPK Slt2 make up the cascade that is important in the maintenance of cell wall homeostasis. Fission yeast Mkh1 is involved in MAPK cascades regulating cell morphology, cell wall integrity, salt resistance, and filamentous growth in response to stress. Length = 272

>gnl|CDD|173668 cd05577, STKc_GRK, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

 Score = 41.7 bits (98), Expect = 4e-04
 Identities = 26/69 (37%), Positives = 34/69 (49%), Gaps = 3/69 (4%)

Query: 237 ARVILYLPEDSRLEIIHRDHKTSNVLLDAEINPNISDFGPARIFGDQTEEVTGRVIGTQT 296
           A++I  L    +  I++RD K  NVLLD   N  ISD G A        ++ GR  GT  
Sbjct: 102 AQIICGLEHLHQRRIVYRDLKPENVLLDDHGNVRISDLGLAVELKGGK-KIKGRA-GTPG 159

Query: 297 LKTVPELLQ 305
               PE+LQ
Sbjct: 160 Y-MAPEVLQ 167

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of G protein signaling) homology (RH) domain and several motifs. The C-terminus diverges among different groups of GRKs. There are seven types of GRKs, named GRK1 to GRK7. They are subdivided into three main groups: visual (GRK1/7); beta-adrenergic receptor kinases (GRK2/3); and GRK4-like (GRK4/5/6). Expression of GRK2/3/5/6 is widespread while GRK1/4/7 show a limited tissue distribution. The substrate spectrum of the widely expressed GRKs partially overlaps. GRKs play important roles in the cardiovascular, immune, respiratory, skeletal, and nervous systems. Length = 277

>gnl|CDD|173660 cd05123, STKc_AGC, Catalytic domain of AGC family Protein Serine/Threonine Kinases

 Score = 41.0 bits (97), Expect = 5e-04
 Identities = 26/75 (34%), Positives = 35/75 (46%), Gaps = 14/75 (18%)

Query: 248 RLEIIHRDHKTSNVLLDAEINPNISDFGPARIFGDQTEEVTGRVIGT-QTLKTVPELLQA 306
            L II+RD K  N+LLDA+ +  ++DFG A+         T    GT + L   PE+L  
Sbjct: 111 SLGIIYRDLKPENILLDADGHIKLTDFGLAKELSS-EGSRTNTFCGTPEYL--APEVLLG 167

Query: 307 --------WKLWSEG 313
                   W  WS G
Sbjct: 168 KGYGKAVDW--WSLG 180

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the turn motif. Phosphorylation at the A-loop is required of most AGC kinases, which results in a disorder-to-order transition of the A-loop. The ordered conformation results in the access of substrates and ATP to the active site. A subset of AGC kinases with C-terminal extensions containing the HM also requires phosphorylation at this site. Phosphorylation at the HM allows the C-terminal extension to form an ordered structure that packs into the hydrophobic pocket of the catalytic domain, which then reconfigures the kinase into an active bi-lobed state. In addition, growth factor-activated AGC kinases such as PKB, p70S6K, RSK, MSK, PKC, and SGK, require phosphorylation at the turn motif (also called tail or zipper site), located N-terminal to the HM at the C-terminal extension. AGC kinases regulate many cellular processes including division, growth, survival, metabolism, motility, and differentiation. Many are implicated in the development of various human diseases. Length = 250

>gnl|CDD|197581 smart00219, TyrKc, Tyrosine kinase, catalytic domain

 Score = 41.0 bits (97), Expect = 6e-04
 Identities = 17/48 (35%), Positives = 22/48 (45%), Gaps = 3/48 (6%)

Query: 231 NILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEINPNISDFGPAR 278
           +    IAR + YL        IHRD    N L+   +   ISDFG +R
Sbjct: 106 SFALQIARGMEYL---ESKNFIHRDLAARNCLVGENLVVKISDFGLSR 150

Phosphotransferases. Tyrosine-specific kinase subfamily. Length = 257

>gnl|CDD|173705 cd05614, STKc_MSK2_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2

 Score = 41.1 bits (96), Expect = 6e-04
 Identities = 23/68 (33%), Positives = 39/68 (57%), Gaps = 1/68 (1%)

Query: 239 VILYLPEDSRLEIIHRDHKTSNVLLDAEINPNISDFGPARIFGDQTEEVTGRVIGTQTLK 298
           +IL L    +L I++RD K  N+LLD+E +  ++DFG ++ F  + +E T    GT    
Sbjct: 114 IILALEHLHKLGIVYRDIKLENILLDSEGHVVLTDFGLSKEFLSEEKERTYSFCGT-IEY 172

Query: 299 TVPELLQA 306
             PE+++ 
Sbjct: 173 MAPEIIRG 180

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSK2 and MSK1 play nonredundant roles in activating histone H3 kinases, which play pivotal roles in compaction of the chromatin fiber. MSK2 is the required H3 kinase in response to stress stimuli and activation of the p38 MAPK pathway. MSK2 also plays a role in the pathogenesis of psoriasis. Length = 332

>gnl|CDD|133165 cd05033, PTKc_EphR, Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases

 Score = 40.8 bits (96), Expect = 6e-04
 Identities = 39/159 (24%), Positives = 65/159 (40%), Gaps = 27/159 (16%)

Query: 230 TNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEINPNISDFGPARIFGDQTEEVTG 289
             +L GIA  + YL   S +  +HRD    N+L+++ +   +SDFG +R   D     T 
Sbjct: 109 VGMLRGIASGMKYL---SEMNYVHRDLAARNILVNSNLVCKVSDFGLSRRLEDSEATYTT 165

Query: 290 RVIGTQTLKTVPELLQ------AWKLWSEGDPM-EIIDEQTKMKGPFSADELVKCIEVG- 341
           +        T PE +       A  +WS G  M E++    +     S  +++K +E G 
Sbjct: 166 KGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSYGERPYWDMSNQDVIKAVEDGY 225

Query: 342 ----------------LLCVQQRIEDWPTMSSVLTMLSN 364
                           L C Q+   + PT S +++ L  
Sbjct: 226 RLPPPMDCPSALYQLMLDCWQKDRNERPTFSQIVSTLDK 264

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. This allows ephrin/EphR dimers to form, leading to the activation of the intracellular tyr kinase domain. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). The main effect of ephrin/EphR interaction is cell-cell repulsion or adhesion. Ephrin/EphR signaling is important in neural development and plasticity, cell morphogenesis and proliferation, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. Length = 266

>gnl|CDD|173736 cd07832, STKc_CCRK, Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

 Score = 40.7 bits (96), Expect = 6e-04
 Identities = 23/70 (32%), Positives = 37/70 (52%), Gaps = 8/70 (11%)

Query: 251 IIHRDHKTSNVLLDAEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELL------ 304
           I+HRD K +N+L+ A+    I+DFG AR+F ++   +    + T+  +  PELL      
Sbjct: 120 IMHRDLKPANLLISADGVLKIADFGLARLFSEEEPRLYSHQVATRWYRA-PELLYGARKY 178

Query: 305 -QAWKLWSEG 313
                LW+ G
Sbjct: 179 DPGVDLWAVG 188

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of heart failure. Length = 286

>gnl|CDD|173742 cd07845, STKc_CDK10, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

 Score = 40.8 bits (96), Expect = 6e-04
 Identities = 28/71 (39%), Positives = 38/71 (53%), Gaps = 11/71 (15%)

Query: 251 IIHRDHKTSNVLLDAEINPNISDFGPARIFGDQTEEVTGRVIGTQTL-KTVPELL----- 304
           IIHRD K SN+LL  +    I+DFG AR +G   + +T +V+   TL    PELL     
Sbjct: 129 IIHRDLKVSNLLLTDKGCLKIADFGLARTYGLPAKPMTPKVV---TLWYRAPELLLGCTT 185

Query: 305 --QAWKLWSEG 313
              A  +W+ G
Sbjct: 186 YTTAIDMWAVG 196

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing increases the transcription of c-RAF and the activation of the p42/p44 MAPK pathway, which leads to antiestrogen resistance. Patients who express low levels of CDK10 relapse early on tamoxifen. Length = 309

>gnl|CDD|214568 smart00221, STYKc, Protein kinase; unclassified specificity

 Score = 40.6 bits (96), Expect = 7e-04
 Identities = 17/48 (35%), Positives = 22/48 (45%), Gaps = 3/48 (6%)

Query: 231 NILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEINPNISDFGPAR 278
           +    IAR + YL        IHRD    N L+   +   ISDFG +R
Sbjct: 107 SFALQIARGMEYL---ESKNFIHRDLAARNCLVGENLVVKISDFGLSR 151

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. Length = 258

>gnl|CDD|173760 cd08220, STKc_Nek8, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

 Score = 40.6 bits (95), Expect = 7e-04
 Identities = 34/110 (30%), Positives = 52/110 (47%), Gaps = 13/110 (11%)

Query: 232 ILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEINP-NISDFGPARIFGDQTEEVTGR 290
           IL+   +++L L       I+HRD KT N+LLD       I DFG ++I   +++  T  
Sbjct: 103 ILHFFVQILLALHHVHTKLILHRDLKTQNILLDKHKMVVKIGDFGISKILSSKSKAYT-- 160

Query: 291 VIGTQTLKTVPELL------QAWKLWSEGDPMEIIDEQTKMKGPFSADEL 334
           V+GT    + PEL       Q   +W+ G    ++ E   +K  F A  L
Sbjct: 161 VVGTPCYIS-PELCEGKPYNQKSDIWALGC---VLYELASLKRAFEAANL 206

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with a rare form of juvenile renal cystic disease, nephronophthisis type 9. It has been suggested that a defect in the ciliary localization of Nek8 contributes to the development of cysts manifested by these diseases. Length = 256

>gnl|CDD|173738 cd07835, STKc_CDK1_like, Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

 Score = 40.8 bits (96), Expect = 7e-04
 Identities = 15/31 (48%), Positives = 21/31 (67%)

Query: 251 IIHRDHKTSNVLLDAEINPNISDFGPARIFG 281
           ++HRD K  N+L+D E    ++DFG AR FG
Sbjct: 120 VLHRDLKPQNLLIDREGALKLADFGLARAFG 150

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 phase entry and progression while the CDK1/cyclin B complex is critical for G2 to M phase transition. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex plays a role in regulating DNA replication. Studies in knockout mice revealed that CDK1 can compensate for the loss of the cdk2 gene as it can also bind cyclin E and drive G1 to S phase transition. CDK3 is regulated by cyclin C and it phosphorylates pRB specifically during the G0/G1 transition. This phosphorylation is required for cells to exit G0 efficiently and enter the G1 phase. Length = 283

>gnl|CDD|173624 cd00192, PTKc, Catalytic domain of Protein Tyrosine Kinases

 Score = 40.6 bits (96), Expect = 7e-04
 Identities = 15/49 (30%), Positives = 25/49 (51%), Gaps = 3/49 (6%)

Query: 230 TNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEINPNISDFGPAR 278
            +    IA+ + YL   +  + +HRD    N L+  ++   ISDFG +R
Sbjct: 108 LSFAIQIAKGMEYL---ASKKFVHRDLAARNCLVGEDLVVKISDFGLSR 153

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain, leading to intracellular signaling. Some RTKs are orphan receptors with no known ligands. Non-receptor (or cytoplasmic) tyr kinases are distributed in different intracellular compartments and are usually multi-domain proteins containing a catalytic tyr kinase domain as well as various regulatory domains such as SH3 and SH2. PTKs are usually autoinhibited and require a mechanism for activation. In many PTKs, the phosphorylation of tyr residues in the activation loop is essential for optimal activity. Aberrant expression of PTKs is associated with many development abnormalities and cancers. Length = 262

>gnl|CDD|173628 cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

 Score = 40.5 bits (95), Expect = 8e-04
 Identities = 24/80 (30%), Positives = 37/80 (46%), Gaps = 4/80 (5%)

Query: 236 IARVILYLPEDSRLEIIHRDHKTSNVLLDAEINPNISDFGPARIFGDQTEEVTGRVIGTQ 295
           I + + YL    R   IHRD    N+L+++E    ISDFG A++  +  +    +  G  
Sbjct: 118 ICKGMDYL-GSQRY--IHRDLAARNILVESEDLVKISDFGLAKVLPEDKDYYYVKEPGES 174

Query: 296 TLK-TVPELLQAWKLWSEGD 314
            +    PE L+  K  S  D
Sbjct: 175 PIFWYAPECLRTSKFSSASD 194

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jaks are also involved in regulating the surface expression of some cytokine receptors. The Jak-STAT pathway is involved in many biological processes including hematopoiesis, immunoregulation, host defense, fertility, lactation, growth, and embryogenesis. Length = 284

>gnl|CDD|143382 cd07877, STKc_p38alpha_MAPK14, Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase

 Score = 40.8 bits (95), Expect = 0.001
 Identities = 38/123 (30%), Positives = 61/123 (49%), Gaps = 17/123 (13%)

Query: 221 ECSKYSS-YVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEINPNISDFGPARI 279
           +C K +  +V  ++Y I R + Y+      +IIHRD K SN+ ++ +    I DFG AR 
Sbjct: 113 KCQKLTDDHVQFLIYQILRGLKYI---HSADIIHRDLKPSNLAVNEDCELKILDFGLAR- 168

Query: 280 FGDQTEEVTGRVIGTQTLKTVPELLQAW-------KLWSEGDPM-EIIDEQTKMKGPFSA 331
                +E+TG V  T+  +  PE++  W        +WS G  M E++  +T   G    
Sbjct: 169 --HTDDEMTGYV-ATRWYRA-PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI 224

Query: 332 DEL 334
           D+L
Sbjct: 225 DQL 227

Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14, is expressed in most tissues and is the major isoform involved in the immune and inflammatory response. It is the central p38 MAPK involved in myogenesis. It plays a role in regulating cell cycle check-point transition and promoting cell differentiation. p38alpha also regulates cell proliferation and death through crosstalk with the JNK pathway. Its substrates include MAPK activated protein kinase 2 (MK2), MK5, and the transcription factors ATF2 and Mitf. Length = 345

>gnl|CDD|173672 cd05581, STKc_PDK1, Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

 Score = 40.3 bits (95), Expect = 0.001
 Identities = 22/80 (27%), Positives = 37/80 (46%), Gaps = 9/80 (11%)

Query: 220 FECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEINPNISDFGPARI 279
            +C+++  Y   IL  +     YL       IIHRD K  N+LLD +++  I+DFG A++
Sbjct: 101 EKCTRF--YAAEILLALE----YL---HSKGIIHRDLKPENILLDKDMHIKITDFGTAKV 151

Query: 280 FGDQTEEVTGRVIGTQTLKT 299
               +   + +   T     
Sbjct: 152 LDPNSSPESNKGDATNIDSQ 171

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to autophosphorylate and is constitutively active in mammalian cells. PDK1 is essential for normal embryo development and is important in regulating cell volume. Length = 280

>gnl|CDD|132947 cd06616, PKc_MKK4, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4

 Score = 40.4 bits (95), Expect = 0.001
 Identities = 20/44 (45%), Positives = 26/44 (59%), Gaps = 2/44 (4%)

Query: 232 ILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEINPNISDFG 275
           I     + + YL E+  L+IIHRD K SN+LLD   N  + DFG
Sbjct: 112 IAVATVKALNYLKEE--LKIIHRDVKPSNILLDRNGNIKLCDFG 153

Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates the downstream targets, c-Jun N-terminal kinase (JNK) and p38 MAPK, on specific threonine and tyrosine residues. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. Their activation is associated with the induction of cell death. Mice deficient in MKK4 die during embryogenesis and display anemia, severe liver hemorrhage, and abnormal hepatogenesis. MKK4 may also play roles in the immune system and in cardiac hypertrophy. It plays a major role in cancer as a tumor and metastasis suppressor. Under certain conditions, MKK4 is pro-oncogenic. Length = 288

>gnl|CDD|214567 smart00220, S_TKc, Serine/Threonine protein kinases, catalytic domain

 Score = 40.2 bits (95), Expect = 0.001
 Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 2/44 (4%)

Query: 251 IIHRDHKTSNVLLDAEINPNISDFGPARIFGDQTEEVTGRVIGT 294
           I+HRD K  N+LLD + +  ++DFG AR       E     +GT
Sbjct: 118 IVHRDLKPENILLDEDGHVKLADFGLARQLDP--GEKLTTFVGT 159

Phosphotransferases. Serine or threonine-specific kinase subfamily. Length = 254

>gnl|CDD|173749 cd07855, STKc_ERK5, Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5

 Score = 40.4 bits (95), Expect = 0.001
 Identities = 25/74 (33%), Positives = 34/74 (45%), Gaps = 13/74 (17%)

Query: 251 IIHRDHKTSNVLLDAEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKT----VPELL-- 304
           +IHRD K SN+L++ +    I DFG AR       E    +  T+ + T     PELL  
Sbjct: 128 VIHRDLKPSNLLVNEDCELRIGDFGMARGLSSSPTEHKYFM--TEYVATRWYRAPELLLS 185

Query: 305 -----QAWKLWSEG 313
                 A  +WS G
Sbjct: 186 LPEYTTAIDMWSVG 199

Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the MAP2K MEK5, which in turn is regulated by the MAP3Ks MEKK2 and MEKK3. Activated ERK5 phosphorylates its targets including myocyte enhancer factor 2 (MEF2), Sap1a, c-Myc, and RSK. It plays a role in EGF-induced cell proliferation during the G1/S phase transition. Studies on knockout mice revealed that ERK5 is essential for cardiovascular development and plays an important role in angiogenesis. It is also critical for neural differentiation and survival. The ERK5 pathway has been implicated in the pathogenesis of many diseases including cancer, cardiac hypertrophy, and atherosclerosis. Length = 334

>gnl|CDD|173699 cd05608, STKc_GRK1, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1

 Score = 39.8 bits (93), Expect = 0.001
 Identities = 28/73 (38%), Positives = 35/73 (47%), Gaps = 2/73 (2%)

Query: 233 LYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEINPNISDFGPARIFGDQTEEVTGRVI 292
            +  A++I  L    +  II+RD K  NVLLD + N  ISD G A    D   +  G   
Sbjct: 100 CFYTAQIISGLEHLHQRRIIYRDLKPENVLLDNDGNVRISDLGLAVELKDGQSKTKGYA- 158

Query: 293 GTQTLKTVPELLQ 305
           GT      PELLQ
Sbjct: 159 GTPGF-MAPELLQ 170

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual group of GRKs and is expressed in retinal cells. It phosphorylates rhodopsin in rod cells, which leads to termination of the phototransduction cascade. Mutations in GRK1 are associated to a recessively inherited form of stationary nightblindness called Oguchi disease. Length = 280

>gnl|CDD|173639 cd05066, PTKc_EphR_A, Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors

 Score = 39.9 bits (93), Expect = 0.001
 Identities = 34/118 (28%), Positives = 56/118 (47%), Gaps = 11/118 (9%)

Query: 232 ILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEINPNISDFGPARIFGDQTEEVTGRV 291
           +L GIA  + YL   S +  +HRD    N+L+++ +   +SDFG +R+  D  E      
Sbjct: 111 MLRGIASGMKYL---SDMGYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEAAYTTR 167

Query: 292 IGTQTLK-TVPELLQ------AWKLWSEGDPM-EIIDEQTKMKGPFSADELVKCIEVG 341
            G   ++ T PE +       A  +WS G  M E++    +     S  +++K IE G
Sbjct: 168 GGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWEMSNQDVIKAIEEG 225

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. EphARs and ephrin-A ligands are expressed in multiple areas of the developing brain, especially in the retina and tectum. They are part of a system controlling retinotectal mapping. Length = 267

>gnl|CDD|173754 cd07865, STKc_CDK9, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9

 Score = 40.1 bits (94), Expect = 0.001
 Identities = 22/59 (37%), Positives = 31/59 (52%), Gaps = 8/59 (13%)

Query: 251 IIHRDHKTSNVLLDAEINPNISDFGPARIF----GDQTEEVTGRVIGTQTL-KTVPELL 304
           I+HRD K +N+L+  +    ++DFG AR F      +    T RV+   TL    PELL
Sbjct: 140 ILHRDMKAANILITKDGILKLADFGLARAFSLSKNSKPNRYTNRVV---TLWYRPPELL 195

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multiple steps of gene expression including transcription elongation, mRNA synthesis, processing, export, and translation. It also plays a role in mediating cytokine induced transcription networks such as IL6-induced STAT3 signaling. In addition, the CDK9/cyclin T2a complex promotes muscle differentiation and enhances the function of some myogenic regulatory factors. Length = 310

>gnl|CDD|173729 cd06617, PKc_MKK3_6, Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6

 Score = 39.7 bits (93), Expect = 0.001
 Identities = 18/44 (40%), Positives = 25/44 (56%), Gaps = 2/44 (4%)

Query: 232 ILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEINPNISDFG 275
           I   I + + YL   S+L +IHRD K SNVL++      + DFG
Sbjct: 108 IAVSIVKALEYL--HSKLSVIHRDVKPSNVLINRNGQVKLCDFG 149

Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs that phosphorylate and activate their downstream target, p38 MAPK, on specific threonine and tyrosine residues. MKK3/6 plays roles in the regulation of cell cycle progression, cytokine- and stress-induced apoptosis, oncogenic transformation, and adult tissue regeneration. In addition, MKK6 plays a critical role in osteoclast survival in inflammatory disease while MKK3 is associated with tumor invasion, progression, and poor patient survival in glioma. Length = 283

>gnl|CDD|143385 cd07880, STKc_p38gamma_MAPK12, Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase

 Score = 39.9 bits (93), Expect = 0.002
 Identities = 33/99 (33%), Positives = 53/99 (53%), Gaps = 15/99 (15%)

Query: 251 IIHRDHKTSNVLLDAEINPNISDFGPARIFGDQTE-EVTGRVIGTQTLKTVPELLQAW-- 307
           IIHRD K  N+ ++ +    I DFG AR    QT+ E+TG V+ T+  +  PE++  W  
Sbjct: 139 IIHRDLKPGNLAVNEDCELKILDFGLAR----QTDSEMTGYVV-TRWYRA-PEVILNWMH 192

Query: 308 -----KLWSEGDPM-EIIDEQTKMKGPFSADELVKCIEV 340
                 +WS G  M E++  +   KG    D+L++ ++V
Sbjct: 193 YTQTVDIWSVGCIMAEMLTGKPLFKGHDHLDQLMEIMKV 231

Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12, is predominantly expressed in skeletal muscle. Unlike p38alpha and p38beta, p38gamma is insensitive to pyridinylimidazoles. It displays an antagonizing function compared to p38alpha. p38gamma inhibits, while p38alpha stimulates, c-Jun phosphorylation and AP-1 mediated transcription. p38gamma also plays a role in the signaling between Ras and the estrogen receptor and has been implicated to increase cell invasion and breast cancer progression. In Xenopus, p38gamma is critical in the meiotic maturation of oocytes. Length = 343

>gnl|CDD|143383 cd07878, STKc_p38beta_MAPK11, Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase

 Score = 40.0 bits (93), Expect = 0.002
 Identities = 40/129 (31%), Positives = 63/129 (48%), Gaps = 17/129 (13%)

Query: 221 ECSKYS-SYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEINPNISDFGPARI 279
           +C K S  +V  ++Y + R + Y+       IIHRD K SNV ++ +    I DFG AR 
Sbjct: 111 KCQKLSDEHVQFLIYQLLRGLKYIHSAG---IIHRDLKPSNVAVNEDCELRILDFGLAR- 166

Query: 280 FGDQTEEVTGRVIGTQTLKTVPELLQAW-------KLWSEGDPM-EIIDEQTKMKGPFSA 331
                +E+TG V  T+  +  PE++  W        +WS G  M E++  +    G    
Sbjct: 167 --QADDEMTGYV-ATRWYRA-PEIMLNWMHYNQTVDIWSVGCIMAELLKGKALFPGNDYI 222

Query: 332 DELVKCIEV 340
           D+L + +EV
Sbjct: 223 DQLKRIMEV 231

Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is widely expressed in tissues and shows more similarity with p38alpha than with the other isoforms. Both are sensitive to pyridinylimidazoles and share some common substrates such as MAPK activated protein kinase 2 (MK2) and the transcription factors ATF2, c-Fos and, ELK-1. p38beta is involved in regulating the activation of the cyclooxygenase-2 promoter and the expression of TGFbeta-induced alpha-smooth muscle cell actin. Length = 343

>gnl|CDD|143384 cd07879, STKc_p38delta_MAPK13, Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase

 Score = 39.9 bits (93), Expect = 0.002
 Identities = 32/98 (32%), Positives = 50/98 (51%), Gaps = 13/98 (13%)

Query: 251 IIHRDHKTSNVLLDAEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELLQAW--- 307
           IIHRD K  N+ ++ +    I DFG AR       E+TG V+ T+  +  PE++  W   
Sbjct: 138 IIHRDLKPGNLAVNEDCELKILDFGLAR---HADAEMTGYVV-TRWYRA-PEVILNWMHY 192

Query: 308 ----KLWSEGDPM-EIIDEQTKMKGPFSADELVKCIEV 340
                +WS G  M E++  +T  KG    D+L + ++V
Sbjct: 193 NQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKV 230

Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13, is found in skeletal muscle, heart, lung, testis, pancreas, and small intestine. It regulates microtubule function by phosphorylating Tau. It activates the c-jun promoter and plays a role in G2 cell cycle arrest. It also controls the degration of c-Myb, which is associated with myeloid leukemia and poor prognosis in colorectal cancer. p38delta is the main isoform involved in regulating the differentiation and apoptosis of keratinocytes. Length = 342

>gnl|CDD|173757 cd08217, STKc_Nek2, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

 Score = 39.5 bits (93), Expect = 0.002
 Identities = 34/116 (29%), Positives = 48/116 (41%), Gaps = 20/116 (17%)

Query: 251 IIHRDHKTSNVLLDAEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELLQAWK-- 308
           ++HRD K +N+ LDA  N  + DFG A+I G  +      V GT      PE L      
Sbjct: 131 VLHRDLKPANIFLDANNNVKLGDFGLAKILGHDSSFAKTYV-GT-PYYMSPEQLNHMSYD 188

Query: 309 ----LWSEGDPMEIIDEQTKMKGPFSA---DELVKCIEVGLLCVQQRIEDWPTMSS 357
               +WS G    +I E   +  PF+A    +L   I+ G      +    P   S
Sbjct: 189 EKSDIWSLGC---LIYELCALSPPFTARNQLQLASKIKEG------KFRRIPYRYS 235

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exit. NIMA is involved in nuclear membrane fission. Vertebrate Nek2 is a cell cycle-regulated STK, localized in centrosomes and kinetochores, that regulates centrosome splitting at the G2/M phase. It also interacts with other mitotic kinases such as Polo-like kinase 1 and may play a role in spindle checkpoint. An increase in the expression of the human NEK2 gene is strongly associated with the progression of non-Hodgkin lymphoma. Length = 265

>gnl|CDD|173669 cd05578, STKc_Yank1, Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

 Score = 39.2 bits (92), Expect = 0.002
 Identities = 15/34 (44%), Positives = 20/34 (58%)

Query: 251 IIHRDHKTSNVLLDAEINPNISDFGPARIFGDQT 284
           IIHRD K  N+LLD + + +I+DF  A      T
Sbjct: 121 IIHRDIKPDNILLDEQGHVHITDFNIATKVTPDT 154

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A. Length = 258

>gnl|CDD|143354 cd07849, STKc_ERK1_2_like, Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases

 Score = 39.6 bits (93), Expect = 0.002
 Identities = 18/39 (46%), Positives = 24/39 (61%), Gaps = 1/39 (2%)

Query: 251 IIHRDHKTSNVLLDAEINPNISDFGPARIFGDQTEEVTG 289
           ++HRD K SN+LL+   +  I DFG ARI  D   + TG
Sbjct: 127 VLHRDLKPSNLLLNTNCDLKICDFGLARI-ADPEHDHTG 164

Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase kinase from the Raf family. ERK1/2 have numerous substrates, many of which are nuclear and participate in transcriptional regulation of many cellular processes. They regulate cell growth, cell proliferation, and cell cycle progression from G1 to S phase. Although the distinct roles of ERK1 and ERK2 have not been fully determined, it is known that ERK2 can maintain most functions in the absence of ERK1, and that the deletion of ERK2 is embryonically lethal. The MAPK, Fus3, regulates yeast mating processes including mating-specific gene expression, G1 arrest, mating projection, and cell fusion. Length = 336

>gnl|CDD|223589 COG0515, SPS1, Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

 Score = 39.7 bits (91), Expect = 0.002
 Identities = 29/116 (25%), Positives = 45/116 (38%), Gaps = 12/116 (10%)

Query: 198 DGEVFLMFEGIKLPDKSEF--TCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRD 255
           +G ++L+ E +      +       +     S    IL  I   + YL       IIHRD
Sbjct: 70  EGSLYLVMEYVDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLHSKG---IIHRD 126

Query: 256 HKTSNVLLDAEIN-PNISDFGPARIFGDQTEEVTGR-----VIGTQTLKTVPELLQ 305
            K  N+LLD +     + DFG A++  D     +        +GT      PE+L 
Sbjct: 127 IKPENILLDRDGRVVKLIDFGLAKLLPDPGSTSSIPALPSTSVGTPGYMA-PEVLL 181

Length = 384

>gnl|CDD|140289 PTZ00263, PTZ00263, protein kinase A catalytic subunit; Provisional

 Score = 39.4 bits (92), Expect = 0.002
 Identities = 25/77 (32%), Positives = 38/77 (49%), Gaps = 10/77 (12%)

Query: 237 ARVILYLPEDSRLEIIHRDHKTSNVLLDAEINPNISDFGPARIFGDQTEEVTGRVIGTQT 296
           A ++L        +II+RD K  N+LLD + +  ++DFG A+       +V  R   T T
Sbjct: 125 AELVLAFEYLHSKDIIYRDLKPENLLLDNKGHVKVTDFGFAK-------KVPDR---TFT 174

Query: 297 LKTVPELLQAWKLWSEG 313
           L   PE L    + S+G
Sbjct: 175 LCGTPEYLAPEVIQSKG 191

Length = 329

>gnl|CDD|133194 cd05063, PTKc_EphR_A2, Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2

 Score = 39.2 bits (91), Expect = 0.002
 Identities = 29/93 (31%), Positives = 47/93 (50%), Gaps = 5/93 (5%)

Query: 224 KYSSY-VTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEINPNISDFGPARIFGD 282
           ++SSY +  +L GIA  + YL   S +  +HRD    N+L+++ +   +SDFG +R+  D
Sbjct: 103 EFSSYQLVGMLRGIAAGMKYL---SDMNYVHRDLAARNILVNSNLECKVSDFGLSRVLED 159

Query: 283 QTEEVTGRVIGTQTLK-TVPELLQAWKLWSEGD 314
             E       G   ++ T PE +   K  S  D
Sbjct: 160 DPEGTYTTSGGKIPIRWTAPEAIAYRKFTSASD 192

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. The EphA2 receptor is overexpressed in tumor cells and tumor blood vessels in a variety of cancers including breast, prostate, lung, and colon. As a result, it is an attractive target for drug design since its inhibition could affect several aspects of tumor progression. Length = 268

>gnl|CDD|173723 cd06605, PKc_MAPKK, Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

 Score = 38.8 bits (91), Expect = 0.002
 Identities = 25/88 (28%), Positives = 40/88 (45%), Gaps = 12/88 (13%)

Query: 232 ILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEINPNISDFGPARIFGDQTEEVTGRV 291
           I   + + + YL E    +IIHRD K SN+L+++     + DFG   + G     +    
Sbjct: 105 IAVAVLKGLTYLHEK--HKIIHRDVKPSNILVNSRGQIKLCDFG---VSGQLVNSLAKTF 159

Query: 292 IGTQTLKTVPELLQAWK------LWSEG 313
           +GT +    PE +Q         +WS G
Sbjct: 160 VGTSSYMA-PERIQGNDYSVKSDIWSLG 186

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity PKs that phosphorylate their downstream targets, MAPKs, at specific threonine and tyrosine residues. There are three MAPK subfamilies: extracellular signal-regulated kinase (ERK), c-Jun N-terminal kinase (JNK), and p38. In mammalian cells, there are seven MAPKKs (named MKK1-7) and 20 MAPKKKs. Each MAPK subfamily can be activated by at least two cognate MAPKKs and by multiple MAPKKKs. Length = 265

>gnl|CDD|173751 cd07860, STKc_CDK2_3, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

 Score = 39.0 bits (91), Expect = 0.003
 Identities = 30/91 (32%), Positives = 42/91 (46%), Gaps = 21/91 (23%)

Query: 227 SYVTNILYGIA-----RVILYLPEDSRLEIIHRDHKTSNVLLDAEINPNISDFGPARIFG 281
           SY+  +L G+A     RV+            HRD K  N+L++ E    ++DFG AR FG
Sbjct: 104 SYLFQLLQGLAFCHSHRVL------------HRDLKPQNLLINTEGAIKLADFGLARAFG 151

Query: 282 DQTEEVTGRVIGTQTL-KTVPELLQAWKLWS 311
                 T  V+   TL    PE+L   K +S
Sbjct: 152 VPVRTYTHEVV---TLWYRAPEILLGCKYYS 179

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex plays a role in regulating DNA replication. CDK2, together with CDK4, also regulates embryonic cell proliferation. Despite these important roles, mice deleted for the cdk2 gene are viable and normal except for being sterile. This may be due to compensation provided by CDK1 (also called Cdc2), which can also bind cyclin E and drive the G1 to S phase transition. CDK3 is regulated by cyclin C and it phosphorylates pRB specifically during the G0/G1 transition. This phosphorylation is required for cells to exit G0 efficiently and enter the G1 phase. Length = 284

>gnl|CDD|132956 cd06625, STKc_MEKK3_like, Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

 Score = 38.6 bits (90), Expect = 0.003
 Identities = 33/115 (28%), Positives = 46/115 (40%), Gaps = 30/115 (26%)

Query: 228 YVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEINPNISDFGPAR----IFGDQ 283
           Y   IL G+     YL       I+HRD K +N+L D+  N  + DFG ++    I    
Sbjct: 109 YTRQILEGVE----YL---HSNMIVHRDIKGANILRDSAGNVKLGDFGASKRLQTICSSG 161

Query: 284 T--EEVTG-------RVIGTQTLK----------TVPELLQAWKLWSEGDPMEII 319
           T  + VTG        VI  +             TV E+L     W+E + M  I
Sbjct: 162 TGMKSVTGTPYWMSPEVISGEGYGRKADVWSVGCTVVEMLTEKPPWAEFEAMAAI 216

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK2 and MEKK3 activate MEK5 (also called MKK5), which activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. MEKK2 and MEKK3 can also activate the MAPKs, c-Jun N-terminal kinase (JNK) and p38, through their respective MAPKKs. Length = 263

>gnl|CDD|143363 cd07858, STKc_TEY_MAPK_plant, Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants

 Score = 38.9 bits (91), Expect = 0.003
 Identities = 25/70 (35%), Positives = 38/70 (54%), Gaps = 9/70 (12%)

Query: 251 IIHRDHKTSNVLLDAEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELLQAWK-- 308
           ++HRD K SN+LL+A  +  I DFG AR   ++ + +T  V+ T+  +  PELL      
Sbjct: 129 VLHRDLKPSNLLLNANCDLKICDFGLARTTSEKGDFMTEYVV-TRWYRA-PELLLNCSEY 186

Query: 309 -----LWSEG 313
                +WS G
Sbjct: 187 TTAIDVWSVG 196

Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activation loop, TEY and TDY. This subfamily represents the TEY subtype and is further subdivided into three groups (A, B, and C). Group A is represented by AtMPK3, AtMPK6, Nicotiana tabacum BTF4 (NtNTF4), among others. They are mostly involved in environmental and hormonal responses. AtMPK3 and AtMPK6 are also key regulators for stomatal development and patterning. Group B is represented by AtMPK4, AtMPK13, and NtNTF6, among others. They may be involved in both cell division and environmental stress response. AtMPK4 also participates in regulating innate immunity. Group C is represented by AtMPK1, AtMPK2, NtNTF3, Oryza sativa MAPK4 (OsMAPK4), among others. They may also be involved in stress responses. AtMPK1 and AtMPK2 are activated following mechanical injury and in the presence of stress chemicals such as jasmonic acid, hydrogen peroxide and abscisic acid. OsMAPK4 is also called OsMSRMK3 for Multiple Stress-Responsive MAPK3. Length = 337

>gnl|CDD|173688 cd05597, STKc_DMPK_like, Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases

 Score = 39.0 bits (91), Expect = 0.003
 Identities = 39/116 (33%), Positives = 56/116 (48%), Gaps = 25/116 (21%)

Query: 236 IARVILYLPEDSRLEIIHRDHKTSNVLLDAEINPNISDFGPA-RIFGDQTEEVTGRV-IG 293
           +A ++L +    +L  +HRD K  NVLLD   +  ++DFG   R+  D T  V   V +G
Sbjct: 108 LAEMVLAIDSVHQLGYVHRDIKPDNVLLDKNGHIRLADFGSCLRLLADGT--VQSNVAVG 165

Query: 294 TQTLKTVPELLQA-------------WKLWSEGDPM-EIIDEQTKMKGPFSADELV 335
           T    + PE+LQA             W  WS G  M E++  +T    PF A+ LV
Sbjct: 166 TPDYIS-PEILQAMEDGKGRYGPECDW--WSLGVCMYEMLYGET----PFYAESLV 214

Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy, and cardiac conduction defects. The genetic basis for DM1 is the mutational expansion of a CTG repeat in the 3'-UTR of DMPK. DMPK is expressed in skeletal and cardiac muscles, and in central nervous tissues. The functional role of DMPK is not fully understood. It may play a role in the signal transduction and homeostasis of calcium. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKgamma is expressed in heart and skeletal muscles, unlike MRCKalpha and MRCKbeta, which are expressed ubiquitously. Length = 331

>gnl|CDD|173678 cd05587, STKc_cPKC, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C

 Score = 38.6 bits (90), Expect = 0.004
 Identities = 19/36 (52%), Positives = 25/36 (69%), Gaps = 2/36 (5%)

Query: 251 IIHRDHKTSNVLLDAEINPNISDFGPAR--IFGDQT 284
           II+RD K  NV+LDAE +  I+DFG  +  IFG +T
Sbjct: 122 IIYRDLKLDNVMLDAEGHIKIADFGMCKENIFGGKT 157

Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory domain. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. cPKCs are potent kinases for histones, myelin basic protein, and protamine. PKC-gamma is mainly expressed in neuronal tissues. It plays a role in protection from ischemia. Length = 324

>gnl|CDD|173761 cd08221, STKc_Nek9, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

 Score = 38.2 bits (89), Expect = 0.004
 Identities = 39/161 (24%), Positives = 59/161 (36%), Gaps = 34/161 (21%)

Query: 228 YVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEINPNISDFGPARIFGDQTEEV 287
            V   L+ I   + Y+ +     I+HRD KT N+ L       + DFG ++I G +   +
Sbjct: 102 MVLWYLFQIVSAVSYIHKAG---ILHRDIKTLNIFLTKAGLIKLGDFGISKILGSEY-SM 157

Query: 288 TGRVIGTQTLKTVPELLQAWK------LWSEGDPMEIIDEQTKMKGPFSADELVKC---- 337
              V+GT      PEL Q  K      +W+ G    ++ E   +K  F A   +      
Sbjct: 158 AETVVGT-PYYMSPELCQGVKYNFKSDIWALGC---VLYELLTLKRTFDATNPLNLVVKI 213

Query: 338 ----------------IEVGLLCVQQRIEDWPTMSSVLTML 362
                           I +    +QQ  E  PT   VL   
Sbjct: 214 VQGNYTPVVSVYSSELISLVHSLLQQDPEKRPTADEVLDQP 254

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associates with FACT (FAcilitates Chromatin Transcription) and modulates interphase progression. It also interacts with Nek6, and Nek7, during mitosis, resulting in their activation. Length = 256

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	392
KOG1187	361	consensus Serine/threonine protein kinase [Signal	99.95
KOG0615	475	consensus Serine/threonine protein kinase Chk2 and	99.94
KOG0192	362	consensus Tyrosine kinase specific for activated (	99.92
KOG0581	364	consensus Mitogen-activated protein kinase kinase	99.91
KOG0575	592	consensus Polo-like serine/threonine protein kinas	99.91
KOG0592	604	consensus 3-phosphoinositide-dependent protein kin	99.9
KOG0600	560	consensus Cdc2-related protein kinase [Cell cycle	99.9
KOG0198	313	consensus MEKK and related serine/threonine protei	99.89
KOG0591	375	consensus NIMA (never in mitosis)-related G2-speci	99.89
KOG0661	538	consensus MAPK related serine/threonine protein ki	99.89
KOG0578	550	consensus p21-activated serine/threonine protein k	99.89
KOG0593	396	consensus Predicted protein kinase KKIAMRE [Genera	99.89
KOG0595	429	consensus Serine/threonine-protein kinase involved	99.88
KOG0598	357	consensus Ribosomal protein S6 kinase and related	99.88
KOG0197	468	consensus Tyrosine kinases [Signal transduction me	99.88
KOG0659	318	consensus Cdk activating kinase (CAK)/RNA polymera	99.87
KOG0663	419	consensus Protein kinase PITSLRE and related kinas	99.87
KOG0583	370	consensus Serine/threonine protein kinase [Signal	99.87
KOG0616	355	consensus cAMP-dependent protein kinase catalytic	99.86
KOG0589	426	consensus Serine/threonine protein kinase [General	99.86
cd05102	338	PTKc_VEGFR3 Catalytic domain of the Protein Tyrosi	99.86
KOG0585	576	consensus Ca2+/calmodulin-dependent protein kinase	99.86
cd00028	116	B_lectin Bulb-type mannose-specific lectin. The do	99.85
PF01453	114	B_lectin: D-mannose binding lectin; InterPro: IPR0	99.85
KOG0588	786	consensus Serine/threonine protein kinase [Cell cy	99.85
KOG4279	1226	consensus Serine/threonine protein kinase [Signal	99.84
KOG0660	359	consensus Mitogen-activated protein kinase [Signal	99.84
cd05064	266	PTKc_EphR_A10 Catalytic domain of the Protein Tyro	99.84
cd05096	304	PTKc_DDR1 Catalytic domain of the Protein Tyrosine	99.84
PTZ00267	478	NIMA-related protein kinase; Provisional	99.84
cd07848	287	STKc_CDKL5 Catalytic domain of the Serine/Threonin	99.84
cd05052	263	PTKc_Abl Catalytic domain of the Protein Tyrosine	99.84
KOG0599	411	consensus Phosphorylase kinase gamma subunit [Carb	99.84
cd05106	374	PTKc_CSF-1R Catalytic domain of the Protein Tyrosi	99.84
cd05104	375	PTKc_Kit Catalytic domain of the Protein Tyrosine	99.83
cd05601	330	STKc_CRIK Catalytic domain of the Protein Serine/T	99.83
KOG0582	516	consensus Ste20-like serine/threonine protein kina	99.83
cd05048	283	PTKc_Ror Catalytic Domain of the Protein Tyrosine	99.83
cd05571	323	STKc_PKB Catalytic domain of the Protein Serine/Th	99.83
KOG1989	738	consensus ARK protein kinase family [Signal transd	99.83
cd05094	291	PTKc_TrkC Catalytic domain of the Protein Tyrosine	99.83
cd05594	325	STKc_PKB_alpha Catalytic domain of the Protein Ser	99.83
KOG0694	694	consensus Serine/threonine protein kinase [Signal	99.83
cd05114	256	PTKc_Tec_Rlk Catalytic domain of the Protein Tyros	99.83
cd05111	279	PTK_HER3 Pseudokinase domain of the Protein Tyrosi	99.83
cd05614	332	STKc_MSK2_N N-terminal catalytic domain of the Pro	99.83
cd07862	290	STKc_CDK6 Catalytic domain of the Serine/Threonine	99.83
cd05585	312	STKc_YPK1_like Catalytic domain of Yeast Protein K	99.83
KOG4721	904	consensus Serine/threonine protein kinase, contain	99.82
cd05072	261	PTKc_Lyn Catalytic domain of the Protein Tyrosine	99.82
cd05113	256	PTKc_Btk_Bmx Catalytic domain of the Protein Tyros	99.82
KOG1026	774	consensus Nerve growth factor receptor TRKA and re	99.82
PHA02988	283	hypothetical protein; Provisional	99.82
cd05062	277	PTKc_IGF-1R Catalytic domain of the Protein Tyrosi	99.82
KOG0196	996	consensus Tyrosine kinase, EPH (ephrin) receptor f	99.82
cd07869	303	STKc_PFTAIRE1 Catalytic domain of the Serine/Threo	99.82
cd05063	268	PTKc_EphR_A2 Catalytic domain of the Protein Tyros	99.82
KOG0594	323	consensus Protein kinase PCTAIRE and related kinas	99.82
cd05593	328	STKc_PKB_gamma Catalytic domain of the Protein Ser	99.82
cd07871	288	STKc_PCTAIRE3 Catalytic domain of the Serine/Threo	99.82
PLN00034	353	mitogen-activated protein kinase kinase; Provision	99.82
cd05582	318	STKc_RSK_N N-terminal catalytic domain of the Prot	99.82
cd05093	288	PTKc_TrkB Catalytic domain of the Protein Tyrosine	99.82
cd05592	316	STKc_nPKC_theta_delta Catalytic domain of the Prot	99.82
cd05105	400	PTKc_PDGFR_alpha Catalytic domain of the Protein T	99.81
cd05077	262	PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of th	99.81
cd05059	256	PTKc_Tec_like Catalytic domain of Tec-like Protein	99.81
KOG0605	550	consensus NDR and related serine/threonine kinases	99.81
cd05097	295	PTKc_DDR_like Catalytic domain of Discoidin Domain	99.81
cd05590	320	STKc_nPKC_eta Catalytic domain of the Protein Seri	99.81
cd05068	261	PTKc_Frk_like Catalytic domain of Fyn-related kina	99.81
cd05595	323	STKc_PKB_beta Catalytic domain of the Protein Seri	99.81
cd06649	331	PKc_MEK2 Catalytic domain of the dual-specificity	99.81
cd05600	333	STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p-	99.81
cd05116	257	PTKc_Syk Catalytic domain of the Protein Tyrosine	99.81
cd05078	258	PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain	99.81
cd05586	330	STKc_Sck1_like Catalytic domain of Suppressor of l	99.81
cd05051	296	PTKc_DDR Catalytic domain of the Protein Tyrosine	99.81
cd05101	304	PTKc_FGFR2 Catalytic domain of the Protein Tyrosin	99.81
smart00108	114	B_lectin Bulb-type mannose-specific lectin.	99.81
KOG1095	1025	consensus Protein tyrosine kinase [Signal transduc	99.81
cd05602	325	STKc_SGK1 Catalytic domain of the Protein Serine/T	99.81
cd05049	280	PTKc_Trk Catalytic domain of the Protein Tyrosine	99.81
PTZ00426	340	cAMP-dependent protein kinase catalytic subunit; P	99.81
PF07714	259	Pkinase_Tyr: Protein tyrosine kinase Protein kinas	99.81
cd05584	323	STKc_p70S6K Catalytic domain of the Protein Serine	99.81
PTZ00263	329	protein kinase A catalytic subunit; Provisional	99.81
cd05612	291	STKc_PRKX_like Catalytic domain of PRKX-like Prote	99.81
cd05033	266	PTKc_EphR Catalytic domain of Ephrin Receptor Prot	99.81
cd05091	283	PTKc_Ror2 Catalytic domain of the Protein Tyrosine	99.81
cd07859	338	STKc_TDY_MAPK_plant Catalytic domain of the Serine	99.81
cd05053	293	PTKc_FGFR Catalytic domain of the Protein Tyrosine	99.81
cd05090	283	PTKc_Ror1 Catalytic domain of the Protein Tyrosine	99.81
cd05604	325	STKc_SGK3 Catalytic domain of the Protein Serine/T	99.81
cd05591	321	STKc_nPKC_epsilon Catalytic domain of the Protein	99.81
cd05620	316	STKc_nPKC_delta Catalytic domain of the Protein Se	99.81
KOG0033	355	consensus Ca2+/calmodulin-dependent protein kinase	99.81
cd05603	321	STKc_SGK2 Catalytic domain of the Protein Serine/T	99.81
cd05108	316	PTKc_EGFR Catalytic domain of the Protein Tyrosine	99.81
cd05618	329	STKc_aPKC_iota Catalytic domain of the Protein Ser	99.81
cd05573	350	STKc_ROCK_NDR_like Catalytic domain of ROCK- and N	99.81
cd05045	290	PTKc_RET Catalytic domain of the Protein Tyrosine	99.81
cd05076	274	PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of th	99.81
cd05575	323	STKc_SGK Catalytic domain of the Protein Serine/Th	99.8
cd05084	252	PTKc_Fes Catalytic domain of the Protein Tyrosine	99.8
cd05032	277	PTKc_InsR_like Catalytic domain of Insulin Recepto	99.8
cd05066	267	PTKc_EphR_A Catalytic domain of the Protein Tyrosi	99.8
cd05596	370	STKc_ROCK Catalytic domain of the Protein Serine/T	99.8
cd05042	269	PTKc_Aatyk Catalytic domain of the Protein Tyrosin	99.8
cd05054	337	PTKc_VEGFR Catalytic domain of the Protein Tyrosin	99.8
cd05109	279	PTKc_HER2 Catalytic domain of the Protein Tyrosine	99.8
cd05058	262	PTKc_Met_Ron Catalytic domain of the Protein Tyros	99.8
cd05115	257	PTKc_Zap-70 Catalytic domain of the Protein Tyrosi	99.8
cd05621	370	STKc_ROCK2 Catalytic domain of the Protein Serine/	99.8
cd05055	302	PTKc_PDGFR Catalytic domain of the Protein Tyrosin	99.8
cd05087	269	PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein	99.8
cd07853	372	STKc_NLK Catalytic domain of the Serine/Threonine	99.8
PTZ00283	496	serine/threonine protein kinase; Provisional	99.8
cd05035	273	PTKc_Axl_like Catalytic Domain of Axl-like Protein	99.8
cd05631	285	STKc_GRK4 Catalytic domain of the Protein Serine/T	99.8
KOG0194	474	consensus Protein tyrosine kinase [Signal transduc	99.8
PHA03212	391	serine/threonine kinase US3; Provisional	99.8
cd05085	250	PTKc_Fer Catalytic domain of the Protein Tyrosine	99.8
cd05092	280	PTKc_TrkA Catalytic domain of the Protein Tyrosine	99.8
cd05089	297	PTKc_Tie1 Catalytic domain of the Protein Tyrosine	99.8
cd05619	316	STKc_nPKC_theta Catalytic domain of the Protein Se	99.8
KOG0193	678	consensus Serine/threonine protein kinase RAF [Sig	99.8
cd05098	307	PTKc_FGFR1 Catalytic domain of the Protein Tyrosin	99.8
KOG0611	668	consensus Predicted serine/threonine protein kinas	99.8
cd06650	333	PKc_MEK1 Catalytic domain of the dual-specificity	99.8
KOG0596	677	consensus Dual specificity; serine/threonine and t	99.8
cd05616	323	STKc_cPKC_beta Catalytic domain of the Protein Ser	99.79
cd05069	260	PTKc_Yes Catalytic domain of the Protein Tyrosine	99.79
cd05086	268	PTKc_Aatyk2 Catalytic domain of the Protein Tyrosi	99.79
cd05148	261	PTKc_Srm_Brk Catalytic domain of the Protein Tyros	99.79
cd05075	272	PTKc_Axl Catalytic domain of the Protein Tyrosine	99.79
cd05095	296	PTKc_DDR2 Catalytic domain of the Protein Tyrosine	99.79
cd08228	267	STKc_Nek6 Catalytic domain of the Protein Serine/T	99.79
cd05589	324	STKc_PKN Catalytic domain of the Protein Serine/Th	99.79
cd05061	288	PTKc_InsR Catalytic domain of the Protein Tyrosine	99.79
cd05079	284	PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the	99.79
cd05071	262	PTKc_Src Catalytic domain of the Protein Tyrosine	99.79
cd05065	269	PTKc_EphR_B Catalytic domain of the Protein Tyrosi	99.79
KOG0597	808	consensus Serine-threonine protein kinase FUSED [G	99.79
cd05570	318	STKc_PKC Catalytic domain of the Protein Serine/Th	99.79
cd05036	277	PTKc_ALK_LTK Catalytic domain of the Protein Tyros	99.79
cd05110	303	PTKc_HER4 Catalytic domain of the Protein Tyrosine	99.79
cd05100	334	PTKc_FGFR3 Catalytic domain of the Protein Tyrosin	99.79
cd05047	270	PTKc_Tie Catalytic domain of Tie Protein Tyrosine	99.79
cd05060	257	PTKc_Syk_like Catalytic domain of Spleen Tyrosine	99.79
cd05088	303	PTKc_Tie2 Catalytic domain of the Protein Tyrosine	99.79
cd00192	262	PTKc Catalytic domain of Protein Tyrosine Kinases.	99.79
cd07841	298	STKc_CDK7 Catalytic domain of the Serine/Threonine	99.79
cd05050	288	PTKc_Musk Catalytic domain of the Protein Tyrosine	99.79
cd05099	314	PTKc_FGFR4 Catalytic domain of the Protein Tyrosin	99.79
cd05082	256	PTKc_Csk Catalytic domain of the Protein Tyrosine	99.79
cd05587	324	STKc_cPKC Catalytic domain of the Protein Serine/T	99.79
cd08229	267	STKc_Nek7 Catalytic domain of the Protein Serine/T	99.79
cd05588	329	STKc_aPKC Catalytic domain of the Protein Serine/T	99.79
cd05112	256	PTKc_Itk Catalytic domain of the Protein Tyrosine	99.79
cd05081	284	PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of	99.79
cd08529	256	STKc_FA2-like Catalytic domain of the Protein Seri	99.78
cd05597	331	STKc_DMPK_like Catalytic domain of Myotonic Dystro	99.78
cd05044	269	PTKc_c-ros Catalytic domain of the Protein Tyrosin	99.78
cd07872	309	STKc_PCTAIRE2 Catalytic domain of the Serine/Threo	99.78
cd05040	257	PTKc_Ack_like Catalytic domain of the Protein Tyro	99.78
cd05070	260	PTKc_Fyn_Yrk Catalytic domain of the Protein Tyros	99.78
cd05107	401	PTKc_PDGFR_beta Catalytic domain of the Protein Ty	99.78
cd05080	283	PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the	99.78
cd05608	280	STKc_GRK1 Catalytic domain of the Protein Serine/T	99.78
cd08219	255	STKc_Nek3 Catalytic domain of the Protein Serine/T	99.78
cd05617	327	STKc_aPKC_zeta Catalytic domain of the Protein Ser	99.78
cd06646	267	STKc_MAP4K5 Catalytic domain of the Protein Serine	99.78
KOG0658	364	consensus Glycogen synthase kinase-3 [Carbohydrate	99.78
cd05073	260	PTKc_Hck Catalytic domain of the Protein Tyrosine	99.78
cd08528	269	STKc_Nek10 Catalytic domain of the Protein Serine/	99.78
cd07861	285	STKc_CDK1_euk Catalytic domain of the Serine/Threo	99.78
cd05622	371	STKc_ROCK1 Catalytic domain of the Protein Serine/	99.78
cd06643	282	STKc_SLK Catalytic domain of the Protein Serine/Th	99.78
PHA03211	461	serine/threonine kinase US3; Provisional	99.78
cd05628	363	STKc_NDR1 Catalytic domain of the Protein Serine/T	99.78
PHA03207	392	serine/threonine kinase US3; Provisional	99.77
cd05056	270	PTKc_FAK Catalytic domain of the Protein Tyrosine	99.77
cd07863	288	STKc_CDK4 Catalytic domain of the Serine/Threonine	99.77
cd05038	284	PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the P	99.77
cd05615	323	STKc_cPKC_alpha Catalytic domain of the Protein Se	99.77
smart00219	258	TyrKc Tyrosine kinase, catalytic domain. Phosphotr	99.77
cd05037	259	PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the	99.77
PHA03209	357	serine/threonine kinase US3; Provisional	99.77
cd05598	376	STKc_LATS Catalytic domain of the Protein Serine/T	99.77
cd06644	292	STKc_STK10_LOK Catalytic domain of the Protein Ser	99.77
cd06638	286	STKc_myosinIIIA Catalytic domain of the Protein Se	99.77
cd06637	272	STKc_TNIK Catalytic domain of the Protein Serine/T	99.77
cd05034	261	PTKc_Src_like Catalytic domain of Src kinase-like	99.77
KOG1035	1351	consensus eIF-2alpha kinase GCN2 [Translation, rib	99.77
cd06612	256	STKc_MST1_2 Catalytic domain of the Protein Serine	99.77
cd08224	267	STKc_Nek6_Nek7 Catalytic domain of the Protein Ser	99.77
cd07874	355	STKc_JNK3 Catalytic domain of the Serine/Threonine	99.77
KOG0580	281	consensus Serine/threonine protein kinase [Cell cy	99.77
KOG0201	467	consensus Serine/threonine protein kinase [Signal	99.77
cd05623	332	STKc_MRCK_alpha Catalytic domain of the Protein Se	99.77
cd06645	267	STKc_MAP4K3 Catalytic domain of the Protein Serine	99.77
cd05626	381	STKc_LATS2 Catalytic domain of the Protein Serine/	99.77
KOG4717	864	consensus Serine/threonine protein kinase [Signal	99.77
cd05046	275	PTK_CCK4 Pseudokinase domain of the Protein Tyrosi	99.77
cd05057	279	PTKc_EGFR_like Catalytic domain of Epidermal Growt	99.77
cd05629	377	STKc_NDR_like_fungal Catalytic domain of Fungal Nu	99.77
cd08221	256	STKc_Nek9 Catalytic domain of the Protein Serine/T	99.77
PTZ00036	440	glycogen synthase kinase; Provisional	99.77
cd05041	251	PTKc_Fes_like Catalytic domain of Fes-like Protein	99.77
cd07868	317	STKc_CDK8 Catalytic domain of the Serine/Threonine	99.77
cd05607	277	STKc_GRK7 Catalytic domain of the Protein Serine/T	99.77
cd05043	280	PTK_Ryk Pseudokinase domain of Ryk (Receptor relat	99.77
cd07875	364	STKc_JNK1 Catalytic domain of the Serine/Threonine	99.77
cd05103	343	PTKc_VEGFR2 Catalytic domain of the Protein Tyrosi	99.77
cd05599	364	STKc_NDR_like Catalytic domain of Nuclear Dbf2-Rel	99.77
KOG4645	1509	consensus MAPKKK (MAP kinase kinase kinase) SSK2 a	99.77
cd05067	260	PTKc_Lck_Blk Catalytic domain of the Protein Tyros	99.76
cd06625	263	STKc_MEKK3_like Catalytic domain of MAP/ERK kinase	99.76
PLN00113	968	leucine-rich repeat receptor-like protein kinase;	99.76
cd07832	286	STKc_CCRK Catalytic domain of the Serine/Threonine	99.76
KOG0584	632	consensus Serine/threonine protein kinase [General	99.76
cd07839	284	STKc_CDK5 Catalytic domain of the Serine/Threonine	99.76
cd05624	331	STKc_MRCK_beta Catalytic domain of the Protein Ser	99.76
cd07876	359	STKc_JNK2 Catalytic domain of the Serine/Threonine	99.76
cd06642	277	STKc_STK25-YSK1 Catalytic domain of the Protein Se	99.76
PHA03210	501	serine/threonine kinase US3; Provisional	99.76
PTZ00284	467	protein kinase; Provisional	99.76
cd05039	256	PTKc_Csk_like Catalytic domain of C-terminal Src k	99.76
KOG0986	591	consensus G protein-coupled receptor kinase [Signa	99.76
cd08223	257	STKc_Nek4 Catalytic domain of the Protein Serine/T	99.76
cd07846	286	STKc_CDKL2_3 Catalytic domain of the Serine/Threon	99.76
cd07860	284	STKc_CDK2_3 Catalytic domain of the Serine/Threoni	99.76
KOG2345	302	consensus Serine/threonine protein kinase/TGF-beta	99.76
cd05627	360	STKc_NDR2 Catalytic domain of the Protein Serine/T	99.76
cd06611	280	STKc_SLK_like Catalytic domain of Ste20-like kinas	99.76
cd07847	286	STKc_CDKL1_4 Catalytic domain of the Serine/Threon	99.76
PLN03225	566	Serine/threonine-protein kinase SNT7; Provisional	99.76
cd07873	301	STKc_PCTAIRE1 Catalytic domain of the Serine/Threo	99.76
cd07833	288	STKc_CDKL Catalytic domain of Cyclin-Dependent pro	99.75
cd06615	308	PKc_MEK Catalytic domain of the dual-specificity P	99.75
cd05625	382	STKc_LATS1 Catalytic domain of the Protein Serine/	99.75
cd07867	317	STKc_CDC2L6 Catalytic domain of Serine/Threonine K	99.75
cd06654	296	STKc_PAK1 Catalytic domain of the Protein Serine/T	99.75
KOG0032	382	consensus Ca2+/calmodulin-dependent protein kinase	99.75
cd08227	327	PK_STRAD_alpha Pseudokinase domain of STE20-relate	99.75
cd06659	297	STKc_PAK6 Catalytic domain of the Protein Serine/T	99.75
cd08216	314	PK_STRAD Pseudokinase domain of STE20-related kina	99.75
cd07831	282	STKc_MOK Catalytic domain of the Serine/Threonine	99.75
cd05074	273	PTKc_Tyro3 Catalytic domain of the Protein Tyrosin	99.75
cd06613	262	STKc_MAP4K3_like Catalytic domain of Mitogen-activ	99.74
cd06658	292	STKc_PAK5 Catalytic domain of the Protein Serine/T	99.74
cd06624	268	STKc_ASK Catalytic domain of the Protein Serine/Th	99.74
cd05605	285	STKc_GRK4_like Catalytic domain of G protein-coupl	99.74
cd07844	291	STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like	99.74
cd06655	296	STKc_PAK2 Catalytic domain of the Protein Serine/T	99.74
cd06628	267	STKc_MAPKKK_Byr2_like Catalytic domain of fungal B	99.74
PLN00009	294	cyclin-dependent kinase A; Provisional	99.74
PF00069	260	Pkinase: Protein kinase domain Protein kinase; unc	99.74
cd05083	254	PTKc_Chk Catalytic domain of the Protein Tyrosine	99.74
PRK13184	932	pknD serine/threonine-protein kinase; Reviewed	99.74
cd07845	309	STKc_CDK10 Catalytic domain of the Serine/Threonin	99.74
cd06656	297	STKc_PAK3 Catalytic domain of the Protein Serine/T	99.74
KOG0579	1187	consensus Ste20-like serine/threonine protein kina	99.74
cd07843	293	STKc_CDC2L1 Catalytic domain of the Serine/Threoni	99.74
cd06639	291	STKc_myosinIIIB Catalytic domain of the Protein Se	99.74
PTZ00266	1021	NIMA-related protein kinase; Provisional	99.74
cd07840	287	STKc_CDK9_like Catalytic domain of Cyclin-Dependen	99.73
cd06608	275	STKc_myosinIII_like Catalytic domain of Class III	99.73
cd07878	343	STKc_p38beta_MAPK11 Catalytic domain of the Serine	99.73
cd08217	265	STKc_Nek2 Catalytic domain of the Protein Serine/T	99.73
PHA02882	294	putative serine/threonine kinase; Provisional	99.73
KOG0612	1317	consensus Rho-associated, coiled-coil containing p	99.73
cd05633	279	STKc_GRK3 Catalytic domain of the Protein Serine/T	99.73
cd06622	286	PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS	99.73
cd06609	274	STKc_MST3_like Catalytic domain of Mammalian Ste20	99.73
cd08218	256	STKc_Nek1 Catalytic domain of the Protein Serine/T	99.73
cd05609	305	STKc_MAST Catalytic domain of the Protein Serine/T	99.73
cd06629	272	STKc_MAPKKK_Bck1_like Catalytic domain of fungal B	99.73
cd05118	283	STKc_CMGC Catalytic domain of CMGC family Serine/T	99.73
cd06640	277	STKc_MST4 Catalytic domain of the Protein Serine/T	99.73
cd05611	260	STKc_Rim15_like Catalytic domain of fungal Rim15-l	99.73
cd07864	302	STKc_CDK12 Catalytic domain of the Serine/Threonin	99.73
cd05632	285	STKc_GRK5 Catalytic domain of the Protein Serine/T	99.73
KOG1094	807	consensus Discoidin domain receptor DDR1 [Signal t	99.73
cd07836	284	STKc_Pho85 Catalytic domain of the Serine/Threonin	99.73
KOG0666	438	consensus Cyclin C-dependent kinase CDK8 [Transcri	99.73
cd07835	283	STKc_CDK1_like Catalytic domain of Cyclin-Dependen	99.72
cd07842	316	STKc_CDK8_like Catalytic domain of Cyclin-Dependen	99.72
cd06620	284	PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr	99.72
cd06619	279	PKc_MKK5 Catalytic domain of the dual-specificity	99.72
KOG0586	596	consensus Serine/threonine protein kinase [General	99.72
cd06636	282	STKc_MAP4K4_6 Catalytic domain of the Protein Seri	99.72
cd06605	265	PKc_MAPKK Catalytic domain of the dual-specificity	99.72
cd06632	258	STKc_MEKK1_plant Catalytic domain of the Protein S	99.72
cd07870	291	STKc_PFTAIRE2 Catalytic domain of the Serine/Threo	99.72
cd06917	277	STKc_NAK1_like Catalytic domain of Fungal Nak1-lik	99.72
cd07865	310	STKc_CDK9 Catalytic domain of the Serine/Threonine	99.72
cd05583	288	STKc_MSK_N N-terminal catalytic domain of the Prot	99.72
cd07837	295	STKc_CdkB_plant Catalytic domain of the Serine/Thr	99.72
PHA03390	267	pk1 serine/threonine-protein kinase 1; Provisional	99.72
cd06631	265	STKc_YSK4 Catalytic domain of the Protein Serine/T	99.72
cd08220	256	STKc_Nek8 Catalytic domain of the Protein Serine/T	99.72
KOG0696	683	consensus Serine/threonine protein kinase [Signal	99.72
cd05579	265	STKc_MAST_like Catalytic domain of Microtubule-ass	99.72
cd05630	285	STKc_GRK6 Catalytic domain of the Protein Serine/T	99.72
cd06626	264	STKc_MEKK4 Catalytic domain of the Protein Serine/	99.72
KOG0577	948	consensus Serine/threonine protein kinase [Signal	99.72
KOG0603	612	consensus Ribosomal protein S6 kinase [Signal tran	99.72
cd07830	283	STKc_MAK_like Catalytic domain of Male germ cell-A	99.72
cd05122	253	PKc_STE Catalytic domain of STE family Protein Kin	99.71
cd06610	267	STKc_OSR1_SPAK Catalytic domain of the Protein Ser	99.71
cd07838	287	STKc_CDK4_6_like Catalytic domain of Cyclin-Depend	99.71
cd05572	262	STKc_cGK_PKG Catalytic domain of the Protein Serin	99.71
cd06648	285	STKc_PAK_II Catalytic domain of the Protein Serine	99.71
cd06651	266	STKc_MEKK3 Catalytic domain of the Protein Serine/	99.71
KOG0574	502	consensus STE20-like serine/threonine kinase MST [	99.71
cd06623	264	PKc_MAPKK_plant_like Catalytic domain of Plant dua	99.71
KOG0604	400	consensus MAP kinase-activated protein kinase 2 [S	99.71
cd06630	268	STKc_MEKK1 Catalytic domain of the Protein Serine/	99.71
cd06617	283	PKc_MKK3_6 Catalytic domain of the dual-specificit	99.71
cd07852	337	STKc_MAPK15 Catalytic domain of the Serine/Threoni	99.71
cd08530	256	STKc_CNK2-like Catalytic domain of the Protein Ser	99.71
cd05574	316	STKc_phototropin_like Catalytic domain of Phototro	99.71
cd08225	257	STKc_Nek5 Catalytic domain of the Protein Serine/T	99.7
cd05606	278	STKc_beta_ARK Catalytic domain of the Protein Seri	99.7
cd06627	254	STKc_Cdc7_like Catalytic domain of Cell division c	99.7
cd07866	311	STKc_BUR1 Catalytic domain of the Serine/Threonine	99.7
KOG0983	391	consensus Mitogen-activated protein kinase (MAPK)	99.7
cd05580	290	STKc_PKA Catalytic domain of the Protein Serine/Th	99.7
cd07850	353	STKc_JNK Catalytic domain of the Serine/Threonine	99.7
cd06607	307	STKc_TAO Catalytic domain of the Protein Serine/Th	99.7
cd07849	336	STKc_ERK1_2_like Catalytic domain of Extracellular	99.69
cd08226	328	PK_STRAD_beta Pseudokinase domain of STE20-related	99.69
cd06635	317	STKc_TAO1 Catalytic domain of the Protein Serine/T	99.69
KOG0667	586	consensus Dual-specificity tyrosine-phosphorylatio	99.69
cd05613	290	STKc_MSK1_N N-terminal catalytic domain of the Pro	99.69
PLN00181	793	protein SPA1-RELATED; Provisional	99.69
cd06634	308	STKc_TAO2 Catalytic domain of the Protein Serine/T	99.69
cd06618	296	PKc_MKK7 Catalytic domain of the dual-specificity	99.69
cd07829	282	STKc_CDK_like Catalytic domain of Cyclin-Dependent	99.69
cd06606	260	STKc_MAPKKK Catalytic domain of the Protein Serine	99.69
KOG4278	1157	consensus Protein tyrosine kinase [Signal transduc	99.68
cd05576	237	STKc_RPK118_like Catalytic domain of the Protein S	99.68
cd06641	277	STKc_MST3 Catalytic domain of the Protein Serine/T	99.68
KOG0662	292	consensus Cyclin-dependent kinase CDK5 [Intracellu	99.68
cd06652	265	STKc_MEKK2 Catalytic domain of the Protein Serine/	99.68
KOG0200	609	consensus Fibroblast/platelet-derived growth facto	99.68
PTZ00024	335	cyclin-dependent protein kinase; Provisional	99.68
KOG0587	953	consensus Traf2- and Nck-interacting kinase and re	99.68
cd06614	286	STKc_PAK Catalytic domain of the Protein Serine/Th	99.68
cd06647	293	STKc_PAK_I Catalytic domain of the Protein Serine/	99.68
cd07857	332	STKc_MPK1 Catalytic domain of the Serine/Threonine	99.68
cd06616	288	PKc_MKK4 Catalytic domain of the dual-specificity	99.68
cd05577	277	STKc_GRK Catalytic domain of the Protein Serine/Th	99.67
cd08215	258	STKc_Nek Catalytic domain of the Protein Serine/Th	99.67
KOG2052	513	consensus Activin A type IB receptor, serine/threo	99.67
cd06657	292	STKc_PAK4 Catalytic domain of the Protein Serine/T	99.67
KOG4257	974	consensus Focal adhesion tyrosine kinase FAK, cont	99.67
cd07855	334	STKc_ERK5 Catalytic domain of the Serine/Threonine	99.67
cd07834	330	STKc_MAPK Catalytic domain of the Serine/Threonine	99.67
cd05581	280	STKc_PDK1 Catalytic domain of the Protein Serine/T	99.67
KOG0690	516	consensus Serine/threonine protein kinase [Signal	99.67
cd05578	258	STKc_Yank1 Catalytic domain of the Protein Serine/	99.67
cd07858	337	STKc_TEY_MAPK_plant Catalytic domain of the Serine	99.67
cd07851	343	STKc_p38 Catalytic domain of the Serine/Threonine	99.66
cd06621	287	PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek	99.66
KOG0610	459	consensus Putative serine/threonine protein kinase	99.66
cd06633	313	STKc_TAO3 Catalytic domain of the Protein Serine/T	99.66
KOG1027	903	consensus Serine/threonine protein kinase and endo	99.65
cd08222	260	STKc_Nek11 Catalytic domain of the Protein Serine/	99.64
cd07879	342	STKc_p38delta_MAPK13 Catalytic domain of the Serin	99.64
cd07880	343	STKc_p38gamma_MAPK12 Catalytic domain of the Serin	99.64
KOG0614	732	consensus cGMP-dependent protein kinase [Signal tr	99.64
KOG4236	888	consensus Serine/threonine protein kinase PKC mu/P	99.63
KOG0607	463	consensus MAP kinase-interacting kinase and relate	99.63
cd05123	250	STKc_AGC Catalytic domain of AGC family Protein Se	99.63
cd07854	342	STKc_MAPK4_6 Catalytic domain of the Serine/Threon	99.63
KOG3653	534	consensus Transforming growth factor beta/activin	99.62
smart00220	244	S_TKc Serine/Threonine protein kinases, catalytic	99.62
KOG0984	282	consensus Mitogen-activated protein kinase (MAPK)	99.62
cd07856	328	STKc_Sty1_Hog1 Catalytic domain of the Serine/Thre	99.61
KOG1151	775	consensus Tousled-like protein kinase [Signal tran	99.61
cd07877	345	STKc_p38alpha_MAPK14 Catalytic domain of the Serin	99.6
KOG0608	1034	consensus Warts/lats-like serine threonine kinases	99.6
KOG0664	449	consensus Nemo-like MAPK-related serine/threonine	99.6
KOG0199	1039	consensus ACK and related non-receptor tyrosine ki	99.6
KOG1006	361	consensus Mitogen-activated protein kinase (MAPK)	99.59
KOG0669	376	consensus Cyclin T-dependent kinase CDK9 [Cell cyc	99.59
cd06653	264	STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kina	99.58
KOG1025	1177	consensus Epidermal growth factor receptor EGFR an	99.58
smart00750	176	KIND kinase non-catalytic C-lobe domain. It is an	99.57
KOG0665	369	consensus Jun-N-terminal kinase (JNK) [Signal tran	99.57
KOG0671	415	consensus LAMMER dual specificity kinases [Signal	99.56
KOG4250	732	consensus TANK binding protein kinase TBK1 [Signal	99.56
cd00180	215	PKc Catalytic domain of Protein Kinases. Protein K	99.56
KOG0695	593	consensus Serine/threonine protein kinase [Signal	99.53
PLN03224	507	probable serine/threonine protein kinase; Provisio	99.52
KOG1024	563	consensus Receptor-like protein tyrosine kinase RY	99.48
KOG0576	829	consensus Mitogen-activated protein kinase kinase	99.44
KOG0590	601	consensus Checkpoint kinase and related serine/thr	99.35
KOG1152	772	consensus Signal transduction serine/threonine kin	99.32
cd05610	669	STKc_MASTL Catalytic domain of the Protein Serine/	99.29
KOG0670	752	consensus U4/U6-associated splicing factor PRP4 [R	99.28
KOG0668	338	consensus Casein kinase II, alpha subunit [Signal	99.28
PRK09188	365	serine/threonine protein kinase; Provisional	99.27
KOG1345	378	consensus Serine/threonine kinase [Signal transduc	99.24
smart00221	225	STYKc Protein kinase; unclassified specificity. Ph	99.21
cd05145	190	RIO1_like RIO kinase family; RIO1, RIO3 and simila	99.16
cd05147	190	RIO1_euk RIO kinase family; eukaryotic RIO1, catal	99.15
PRK12274	218	serine/threonine protein kinase; Provisional	98.96
KOG4158	598	consensus BRPK/PTEN-induced protein kinase [Signal	98.96
KOG0195	448	consensus Integrin-linked kinase [Signal transduct	98.95
KOG0603	612	consensus Ribosomal protein S6 kinase [Signal tran	98.91
smart00090	237	RIO RIO-like kinase.	98.9
KOG1167	418	consensus Serine/threonine protein kinase of the C	98.89
KOG1033	516	consensus eIF-2alpha kinase PEK/EIF2AK3 [Translati	98.86
KOG1023	484	consensus Natriuretic peptide receptor, guanylate	98.84
cd05144	198	RIO2_C RIO kinase family; RIO2, C-terminal catalyt	98.79
PRK10359	232	lipopolysaccharide core biosynthesis protein; Prov	98.79
PRK09605	535	bifunctional UGMP family protein/serine/threonine	98.73
KOG1164	322	consensus Casein kinase (serine/threonine/tyrosine	98.72
TIGR03724	199	arch_bud32 Kae1-associated kinase Bud32. Members o	98.71
PRK14879	211	serine/threonine protein kinase; Provisional	98.68
cd05119	187	RIO RIO kinase family, catalytic domain. The RIO k	98.65
PRK01723	239	3-deoxy-D-manno-octulosonic-acid kinase; Reviewed	98.64
PRK10345	210	hypothetical protein; Provisional	98.61
COG0515	384	SPS1 Serine/threonine protein kinase [General func	98.61
KOG0606	1205	consensus Microtubule-associated serine/threonine	98.57
KOG1240	1431	consensus Protein kinase containing WD40 repeats [	98.53
KOG0590	601	consensus Checkpoint kinase and related serine/thr	98.48
cd05120	155	APH_ChoK_like Aminoglycoside 3'-phosphotransferase	98.46
KOG1163	341	consensus Casein kinase (serine/threonine/tyrosine	98.43
KOG1290	590	consensus Serine/threonine protein kinase [Signal	98.41
PF14531	288	Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_	98.4
KOG1165	449	consensus Casein kinase (serine/threonine/tyrosine	98.37
cd05146	197	RIO3_euk RIO kinase family; eukaryotic RIO3, catal	98.2
TIGR01982	437	UbiB 2-polyprenylphenol 6-hydroxylase. This model	98.18
cd05151	170	ChoK Choline Kinase (ChoK). The ChoK subfamily is	98.09
KOG1166	974	consensus Mitotic checkpoint serine/threonine prot	98.08
COG3642	204	Mn2+-dependent serine/threonine protein kinase [Si	98.05
KOG1266	458	consensus Protein kinase [Signal transduction mech	98.03
cd05610	669	STKc_MASTL Catalytic domain of the Protein Serine/	98.01
KOG0601	524	consensus Cyclin-dependent kinase WEE1 [Cell cycle	98.01
KOG3087	229	consensus Serine/threonine protein kinase [General	97.87
PRK15123	268	lipopolysaccharide core heptose(I) kinase RfaP; Pr	97.72
PRK04750	537	ubiB putative ubiquinone biosynthesis protein UbiB	97.52
PF01163	188	RIO1: RIO1 family; InterPro: IPR018934 Protein pho	97.49
PF06293	206	Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family;	97.48
KOG0601	524	consensus Cyclin-dependent kinase WEE1 [Cell cycle	97.06
PF06176	229	WaaY: Lipopolysaccharide core biosynthesis protein	96.78
KOG0606	1205	consensus Microtubule-associated serine/threonine	96.72
smart00108	114	B_lectin Bulb-type mannose-specific lectin.	96.71
cd05154	223	ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 an	96.7
cd00028	116	B_lectin Bulb-type mannose-specific lectin. The do	96.69
KOG1243	690	consensus Protein kinase [General function predict	96.55
KOG1290	590	consensus Serine/threonine protein kinase [Signal	96.33
KOG2137	700	consensus Protein kinase [Signal transduction mech	96.16
PRK09902	216	hypothetical protein; Provisional	96.11
PF01453	114	B_lectin: D-mannose binding lectin; InterPro: IPR0	95.36
COG0478	304	RIO-like serine/threonine protein kinase fused to	94.81
PF12260	188	PIP49_C: Protein-kinase domain of FAM69; InterPro:	94.71
COG1718	268	RIO1 Serine/threonine protein kinase involved in c	93.42
KOG1235	538	consensus Predicted unusual protein kinase [Genera	91.44
COG0661	517	AarF Predicted unusual protein kinase [General fun	90.73
KOG3741	655	consensus Poly(A) ribonuclease subunit [RNA proces	86.33
KOG2268	465	consensus Serine/threonine protein kinase [Signal	85.88
TIGR00938	307	thrB_alt homoserine kinase, Neisseria type. Homose	85.52
cd05156	302	ChoK_euk Choline Kinase (ChoK) in eukaryotes. The	85.09
cd05155	235	APH_ChoK_like_1 Uncharacterized bacterial proteins	84.65
PF01636	239	APH: Phosphotransferase enzyme family This family	83.98
PRK05231	319	homoserine kinase; Provisional	83.17
TIGR02172	226	Fb_sc_TIGR02172 Fibrobacter succinogenes paralogou	82.69
cd05157	235	ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes.	82.08
PF07387	308	Seadorna_VP7: Seadornavirus VP7; InterPro: IPR0099	81.91
COG5072	488	ALK1 Serine/threonine kinase of the haspin family	81.52
cd05150	244	APH Aminoglycoside 3'-phosphotransferase (APH). Th	81.08

>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.95  E-value=1.4e-28  Score=238.50  Aligned_cols=177  Identities=29%  Similarity=0.373  Sum_probs=142.0

Q ss_pred             CCCccccccCcCCCCC-eeEEecCccCCCcChhhhhhhc-cccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeE
Q 045577          185 SGGCKRNWEADCGDGE-VFLMFEGIKLPDKSEFTCEFEC-SKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVL  262 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~-~~lv~e~~~~~~l~~~~~~~~~-~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIl  262 (392)
                      |++-++.....++.++ .++|+|||++|+|......... ...|..+++|+.++|+||+|||+.+.++||||||||+|||
T Consensus       130 H~Nlv~LlGyC~e~~~~~~LVYEym~nGsL~d~L~~~~~~~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNIL  209 (361)
T KOG1187|consen  130 HPNLVKLLGYCLEGGEHRLLVYEYMPNGSLEDHLHGKKGEPLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNIL  209 (361)
T ss_pred             CcCcccEEEEEecCCceEEEEEEccCCCCHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHee
Confidence            7888887777666664 9999999999999886655543 4477779999999999999999999889999999999999


Q ss_pred             EcCCCCCeEeeeeceEEeCC-CCcceeceeeecccccCchhHHH------HHHHhcCCCcc-------------------
Q 045577          263 LDAEINPNISDFGPARIFGD-QTEEVTGRVIGTQTLKTVPELLQ------AWKLWSEGDPM-------------------  316 (392)
Q Consensus       263 l~~~~~~kl~DFGla~~~~~-~~~~~~~~~~gt~~y~a~~~~~~------~~diws~G~v~-------------------  316 (392)
                      ||+++.+||+|||+|+.... .....+.. .||.+|++ ||+..      +.|++++|.++                   
T Consensus       210 LD~~~~aKlsDFGLa~~~~~~~~~~~~~~-~gt~gY~~-PEy~~~g~lt~KsDVySFGVvllElitgr~~~d~~~~~~~~  287 (361)
T KOG1187|consen  210 LDEDFNAKLSDFGLAKLGPEGDTSVSTTV-MGTFGYLA-PEYASTGKLTEKSDVYSFGVVLLELITGRKAVDQSRPRGEL  287 (361)
T ss_pred             ECCCCCEEccCccCcccCCccccceeeec-CCCCccCC-hhhhccCCcCcccccccchHHHHHHHhCCcccCCCCCcccc
Confidence            99999999999999976543 22222211 79999999 66552      55777776543                   


Q ss_pred             ----------------eeecccccCC-CCCCH-HHHHHHHHHHHhhcccCcCCCCCHHHHHHHHccC
Q 045577          317 ----------------EIIDEQTKMK-GPFSA-DELVKCIEVGLLCVQQRIEDWPTMSSVLTMLSNE  365 (392)
Q Consensus       317 ----------------~~ld~~~~~~-~~~~~-~~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~L~~~  365 (392)
                                      +++|+  .+. +.+.. +++.++.+++.+|++.+|++||+|.+|+++|+..
T Consensus       288 ~l~~w~~~~~~~~~~~eiiD~--~l~~~~~~~~~~~~~~~~~a~~C~~~~~~~RP~m~~Vv~~L~~~  352 (361)
T KOG1187|consen  288 SLVEWAKPLLEEGKLREIVDP--RLKEGEYPDEKEVKKLAELALRCLRPDPKERPTMSQVVKELEGI  352 (361)
T ss_pred             cHHHHHHHHHHCcchhheeCC--CccCCCCChHHHHHHHHHHHHHHcCcCCCcCcCHHHHHHHHHhh
Confidence                            55666  444 44454 7899999999999999999999999999999665

>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]

Probab=99.94  E-value=1.2e-27  Score=224.37  Aligned_cols=169  Identities=18%  Similarity=0.240  Sum_probs=135.2

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEc
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLD  264 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~  264 (392)
                      |++.||.....-.....|+|||||++|++.+..-...|+.... -.-++.|++.|+.|||+.   +|+||||||+|||+.
T Consensus       235 HP~IV~~~d~f~~~ds~YmVlE~v~GGeLfd~vv~nk~l~ed~-~K~~f~Qll~avkYLH~~---GI~HRDiKPeNILl~  310 (475)
T KOG0615|consen  235 HPNIVRIKDFFEVPDSSYMVLEYVEGGELFDKVVANKYLREDL-GKLLFKQLLTAVKYLHSQ---GIIHRDIKPENILLS  310 (475)
T ss_pred             CCCEEEEeeeeecCCceEEEEEEecCccHHHHHHhccccccch-hHHHHHHHHHHHHHHHHc---CcccccCCcceEEec
Confidence            9999999888876677899999999999999877777766433 366899999999999999   999999999999997


Q ss_pred             CC---CCCeEeeeeceEEeCCCCcceeceeeecccccCchhHHH---------HHHHhcCCCccee-ecccccCCCCCC-
Q 045577          265 AE---INPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELLQ---------AWKLWSEGDPMEI-IDEQTKMKGPFS-  330 (392)
Q Consensus       265 ~~---~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~~---------~~diws~G~v~~~-ld~~~~~~~~~~-  330 (392)
                      .+   ..+||+|||+|+..++  .....+.+||+.|.| ||++.         ++|+||+||++.+ +.+.+++.+.+. 
T Consensus       311 ~~~e~~llKItDFGlAK~~g~--~sfm~TlCGTpsYvA-PEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pPFS~~~~~  387 (475)
T KOG0615|consen  311 NDAEDCLLKITDFGLAKVSGE--GSFMKTLCGTPSYVA-PEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPPFSEEYTD  387 (475)
T ss_pred             cCCcceEEEecccchhhcccc--ceehhhhcCCccccC-hhheecCCeecccchheeeeccceEEEEeccCCCcccccCC
Confidence            65   6789999999998752  334556899999999 77762         6799999999854 334334332221 


Q ss_pred             -------------------HHHHHHHHHHHHhhcccCcCCCCCHHHHHH
Q 045577          331 -------------------ADELVKCIEVGLLCVQQRIEDWPTMSSVLT  360 (392)
Q Consensus       331 -------------------~~~~~~~~~i~~~Cl~~dp~~RPsm~eVv~  360 (392)
                                         .+..++...++.+++..||+.||++.|+++
T Consensus       388 ~sl~eQI~~G~y~f~p~~w~~Iseea~dlI~~mL~VdP~~R~s~~eaL~  436 (475)
T KOG0615|consen  388 PSLKEQILKGRYAFGPLQWDRISEEALDLINWMLVVDPENRPSADEALN  436 (475)
T ss_pred             ccHHHHHhcCcccccChhhhhhhHHHHHHHHHhhEeCcccCcCHHHHhc
Confidence                               122346677888999999999999999875

>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]

Probab=99.92  E-value=2.5e-25  Score=214.89  Aligned_cols=176  Identities=20%  Similarity=0.198  Sum_probs=135.4

Q ss_pred             CCCccccccCcCCCC-CeeEEecCccCCCcChhhhh-hhccccchhhhhHHHHHHHhhhhcCcCCCCc-eeeccccccee
Q 045577          185 SGGCKRNWEADCGDG-EVFLMFEGIKLPDKSEFTCE-FECSKYSSYVTNILYGIARVILYLPEDSRLE-IIHRDHKTSNV  261 (392)
Q Consensus       185 s~GCvR~~~l~C~~~-~~~lv~e~~~~~~l~~~~~~-~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~-iiHrDlKp~NI  261 (392)
                      |++.++......+.. ...+||||+++|++.....+ .........+++++.|||+||.|||++   + ||||||||+||
T Consensus        98 HpNIV~f~G~~~~~~~~~~iVtEy~~~GsL~~~l~~~~~~~l~~~~~l~~aldiArGm~YLH~~---~~iIHrDLK~~Ni  174 (362)
T KOG0192|consen   98 HPNIVQFYGACTSPPGSLCIVTEYMPGGSLSVLLHKKRKRKLPLKVRLRIALDIARGMEYLHSE---GPIIHRDLKSDNI  174 (362)
T ss_pred             CCCeeeEEEEEcCCCCceEEEEEeCCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcC---CCeeecccChhhE
Confidence            888887555433333 58999999999999987766 345556666899999999999999998   6 99999999999


Q ss_pred             EEcCCC-CCeEeeeeceEEeCCCCcceeceeeecccccCchhHHH--------HHHHhcCCCcc-eeecccccCC-----
Q 045577          262 LLDAEI-NPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELLQ--------AWKLWSEGDPM-EIIDEQTKMK-----  326 (392)
Q Consensus       262 ll~~~~-~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~~--------~~diws~G~v~-~~ld~~~~~~-----  326 (392)
                      |++.++ .+||+|||+++...... ...+...||+.||| ||+..        +.|+||+|.++ |++.++.++.     
T Consensus       175 Lv~~~~~~~KI~DFGlsr~~~~~~-~~~~~~~GT~~wMA-PEv~~~~~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~~~~  252 (362)
T KOG0192|consen  175 LVDLKGKTLKIADFGLSREKVISK-TSMTSVAGTYRWMA-PEVLRGEKSPYTEKSDVYSFGIVLWELLTGEIPFEDLAPV  252 (362)
T ss_pred             EEcCCCCEEEECCCccceeecccc-ccccCCCCCccccC-hhhhcCCCCcCCccchhhhHHHHHHHHHHCCCCCCCCCHH
Confidence            999997 99999999998765322 22222689999999 66554        56999999876 4444432222     


Q ss_pred             ------------CCCCHHHHHHHHHHHHhhcccCcCCCCCHHHHHHHHccC
Q 045577          327 ------------GPFSADELVKCIEVGLLCVQQRIEDWPTMSSVLTMLSNE  365 (392)
Q Consensus       327 ------------~~~~~~~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~L~~~  365 (392)
                                  ...+......+..++.+||+.||+.||++.+++..|+..
T Consensus       253 ~~~~~v~~~~~Rp~~p~~~~~~l~~l~~~CW~~dp~~RP~f~ei~~~l~~~  303 (362)
T KOG0192|consen  253 QVASAVVVGGLRPPIPKECPPHLSSLMERCWLVDPSRRPSFLEIVSRLESI  303 (362)
T ss_pred             HHHHHHHhcCCCCCCCccCCHHHHHHHHHhCCCCCCcCCCHHHHHHHHHHH
Confidence                        222223445677788899999999999999999999865

>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]

Probab=99.91  E-value=1.8e-25  Score=207.91  Aligned_cols=170  Identities=21%  Similarity=0.298  Sum_probs=127.2

Q ss_pred             CCCccccccCcCCCCC-eeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEE
Q 045577          185 SGGCKRNWEADCGDGE-VFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLL  263 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~-~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll  263 (392)
                      ++..|.-...+..+++ ++++||||++|+|+....+. ....+..+-+|+.++.+||.|||+..  +||||||||+|||+
T Consensus       136 spyIV~~ygaF~~~~~~isI~mEYMDgGSLd~~~k~~-g~i~E~~L~~ia~~VL~GL~YLh~~~--~IIHRDIKPsNlLv  212 (364)
T KOG0581|consen  136 SPYIVGFYGAFYSNGEEISICMEYMDGGSLDDILKRV-GRIPEPVLGKIARAVLRGLSYLHEER--KIIHRDIKPSNLLV  212 (364)
T ss_pred             CCCeeeEeEEEEeCCceEEeehhhcCCCCHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHhhcc--CeeeccCCHHHeee
Confidence            5555655555555674 99999999999998755433 22355557889999999999999632  89999999999999


Q ss_pred             cCCCCCeEeeeeceEEeCCCCcceeceeeecccccCchhHH------HHHHHhcCCCcc-eeecccccCCCC--------
Q 045577          264 DAEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIIDEQTKMKGP--------  328 (392)
Q Consensus       264 ~~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld~~~~~~~~--------  328 (392)
                      +..|++||+|||.++.+.+.   ...+.+||..||| ||-.      ...|+||+|..+ |+..++.++..+        
T Consensus       213 NskGeVKicDFGVS~~lvnS---~a~tfvGT~~YMs-PERi~g~~Ys~~sDIWSLGLsllE~a~GrfP~~~~~~~~~~~~  288 (364)
T KOG0581|consen  213 NSKGEVKICDFGVSGILVNS---IANTFVGTSAYMS-PERISGESYSVKSDIWSLGLSLLELAIGRFPYPPPNPPYLDIF  288 (364)
T ss_pred             ccCCCEEeccccccHHhhhh---hcccccccccccC-hhhhcCCcCCcccceecccHHHHHHhhCCCCCCCcCCCCCCHH
Confidence            99999999999999876533   4556899999999 6544      367999999644 555543222221        


Q ss_pred             -------------CCH-HHHHHHHHHHHhhcccCcCCCCCHHHHHHH
Q 045577          329 -------------FSA-DELVKCIEVGLLCVQQRIEDWPTMSSVLTM  361 (392)
Q Consensus       329 -------------~~~-~~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~  361 (392)
                                   .+. ....++..++..|++.||.+||+..|+++.
T Consensus       289 ~Ll~~Iv~~ppP~lP~~~fS~ef~~FV~~CL~Kdp~~R~s~~qLl~H  335 (364)
T KOG0581|consen  289 ELLCAIVDEPPPRLPEGEFSPEFRSFVSCCLRKDPSERPSAKQLLQH  335 (364)
T ss_pred             HHHHHHhcCCCCCCCcccCCHHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence                         111 122345667779999999999999998764

>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.91  E-value=1.3e-24  Score=213.14  Aligned_cols=171  Identities=20%  Similarity=0.234  Sum_probs=136.6

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEc
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLD  264 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~  264 (392)
                      |++.|+....+.++..+|+|+|.|..+.+.....+... ..+..+..++.||+.||.|||+.   +|||||||..|++|+
T Consensus        77 HpnIV~f~~~FEDs~nVYivLELC~~~sL~el~Krrk~-ltEpEary~l~QIv~GlkYLH~~---~IiHRDLKLGNlfL~  152 (592)
T KOG0575|consen   77 HPNIVQFYHFFEDSNNVYIVLELCHRGSLMELLKRRKP-LTEPEARYFLRQIVEGLKYLHSL---GIIHRDLKLGNLFLN  152 (592)
T ss_pred             CCcEEeeeeEeecCCceEEEEEecCCccHHHHHHhcCC-CCcHHHHHHHHHHHHHHHHHHhc---Cceecccchhheeec
Confidence            77777777777778899999999999999886664443 34555888999999999999998   899999999999999


Q ss_pred             CCCCCeEeeeeceEEeCCCCcceeceeeecccccCchhHHH------HHHHhcCCCcce-eecccccCCCCCCHHHHH--
Q 045577          265 AEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELLQ------AWKLWSEGDPME-IIDEQTKMKGPFSADELV--  335 (392)
Q Consensus       265 ~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~~------~~diws~G~v~~-~ld~~~~~~~~~~~~~~~--  335 (392)
                      +++++||+|||||..+.... ....+.+|||.|+| ||++.      .+|+||.||+++ ++-++|++....-.+...  
T Consensus       153 ~~~~VKIgDFGLAt~le~~~-Erk~TlCGTPNYIA-PEVl~k~gHsfEvDiWSlGcvmYtLL~G~PPFetk~vkety~~I  230 (592)
T KOG0575|consen  153 ENMNVKIGDFGLATQLEYDG-ERKKTLCGTPNYIA-PEVLNKSGHSFEVDIWSLGCVMYTLLVGRPPFETKTVKETYNKI  230 (592)
T ss_pred             CcCcEEecccceeeeecCcc-cccceecCCCcccC-hhHhccCCCCCchhhhhhhhHHHhhhhCCCCcccchHHHHHHHH
Confidence            99999999999999876332 33345899999999 88874      679999999986 455555554432222222  


Q ss_pred             -------------HHHHHHHhhcccCcCCCCCHHHHHHH
Q 045577          336 -------------KCIEVGLLCVQQRIEDWPTMSSVLTM  361 (392)
Q Consensus       336 -------------~~~~i~~~Cl~~dp~~RPsm~eVv~~  361 (392)
                                   ...+++...++.+|.+|||+++|+..
T Consensus       231 k~~~Y~~P~~ls~~A~dLI~~lL~~~P~~Rpsl~~vL~h  269 (592)
T KOG0575|consen  231 KLNEYSMPSHLSAEAKDLIRKLLRPNPSERPSLDEVLDH  269 (592)
T ss_pred             HhcCcccccccCHHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence                         33467789999999999999999854

>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]

Probab=99.90  E-value=1.5e-24  Score=209.72  Aligned_cols=172  Identities=20%  Similarity=0.276  Sum_probs=139.2

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEc
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLD  264 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~  264 (392)
                      |+|.++..-.+-++..+|+|+||+++|++...+|+...+. +.....++.+|..||+|||+.   +||||||||+|||||
T Consensus       133 hPgivkLy~TFQD~~sLYFvLe~A~nGdll~~i~K~Gsfd-e~caR~YAAeIldAleylH~~---GIIHRDlKPENILLd  208 (604)
T KOG0592|consen  133 HPGIVKLYFTFQDEESLYFVLEYAPNGDLLDLIKKYGSFD-ETCARFYAAEILDALEYLHSN---GIIHRDLKPENILLD  208 (604)
T ss_pred             CCCeEEEEEEeecccceEEEEEecCCCcHHHHHHHhCcch-HHHHHHHHHHHHHHHHHHHhc---CceeccCChhheeEc
Confidence            9999999877776788999999999999998888764433 333677899999999999998   999999999999999


Q ss_pred             CCCCCeEeeeeceEEeCCCCc----------ce--eceeeecccccCchhHH------HHHHHhcCCCcc-eeecccccC
Q 045577          265 AEINPNISDFGPARIFGDQTE----------EV--TGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIIDEQTKM  325 (392)
Q Consensus       265 ~~~~~kl~DFGla~~~~~~~~----------~~--~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld~~~~~  325 (392)
                      +++++||+|||.|+.+.....          ..  ....+||..|.+ ||++      ...|+|++||++ +|+.+.+++
T Consensus       209 ~dmhikITDFGsAK~l~~~~~~~~~~~~~~~a~s~~~SFVGTAeYVS-PElL~~~~~~~~sDiWAlGCilyQmlaG~PPF  287 (604)
T KOG0592|consen  209 KDGHIKITDFGSAKILSPSQKSQENPVDPNQASSRRSSFVGTAEYVS-PELLNDSPAGPSSDLWALGCILYQMLAGQPPF  287 (604)
T ss_pred             CCCcEEEeeccccccCChhhccccCccCcccccCcccceeeeecccC-HHHhcCCCCCcccchHHHHHHHHHHhcCCCCC
Confidence            999999999999998862111          11  134899999999 7776      478999999987 577777777


Q ss_pred             CCCCCHHHHHHHH---------------HHHHhhcccCcCCCCCHHHHHHH
Q 045577          326 KGPFSADELVKCI---------------EVGLLCVQQRIEDWPTMSSVLTM  361 (392)
Q Consensus       326 ~~~~~~~~~~~~~---------------~i~~~Cl~~dp~~RPsm~eVv~~  361 (392)
                      .+.......++++               +++...+-.||.+|++..+|-+.
T Consensus       288 ra~NeyliFqkI~~l~y~fp~~fp~~a~dLv~KLLv~dp~~Rlt~~qIk~H  338 (604)
T KOG0592|consen  288 RAANEYLIFQKIQALDYEFPEGFPEDARDLIKKLLVRDPSDRLTSQQIKAH  338 (604)
T ss_pred             ccccHHHHHHHHHHhcccCCCCCCHHHHHHHHHHHccCccccccHHHHhhC
Confidence            7665544444443               46668888999999999888765

>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.90  E-value=1.7e-24  Score=207.80  Aligned_cols=150  Identities=23%  Similarity=0.288  Sum_probs=116.5

Q ss_pred             CCCccccccCcCC--CCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeE
Q 045577          185 SGGCKRNWEADCG--DGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVL  262 (392)
Q Consensus       185 s~GCvR~~~l~C~--~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIl  262 (392)
                      |++.++...+.-+  ++.+|+|+|||+.+..... ....-...+.++..++.|++.||.|||.+   +|+|||||.+|||
T Consensus       175 HpNIikL~eivt~~~~~siYlVFeYMdhDL~GLl-~~p~vkft~~qIKc~mkQLl~Gl~~cH~~---gvlHRDIK~SNiL  250 (560)
T KOG0600|consen  175 HPNIIKLEEIVTSKLSGSIYLVFEYMDHDLSGLL-SSPGVKFTEPQIKCYMKQLLEGLEYCHSR---GVLHRDIKGSNIL  250 (560)
T ss_pred             CCcccceeeEEEecCCceEEEEEecccchhhhhh-cCCCcccChHHHHHHHHHHHHHHHHHhhc---CeeeccccccceE
Confidence            8999988777543  4789999999997543221 11111123445788999999999999999   9999999999999


Q ss_pred             EcCCCCCeEeeeeceEEeCCCCcceeceeeecccccCchhHH-------HHHHHhcCCCcc-eeecccccCCCCCCHHHH
Q 045577          263 LDAEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELL-------QAWKLWSEGDPM-EIIDEQTKMKGPFSADEL  334 (392)
Q Consensus       263 l~~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~-------~~~diws~G~v~-~~ld~~~~~~~~~~~~~~  334 (392)
                      ||.+|.+||+|||||+++........+..+-|..|.+ ||++       .+.|+|+.||++ |++.+++.+++....+++
T Consensus       251 idn~G~LKiaDFGLAr~y~~~~~~~~T~rVvTLWYRp-PELLLG~t~Yg~aVDlWS~GCIl~El~~gkPI~~G~tEveQl  329 (560)
T KOG0600|consen  251 IDNNGVLKIADFGLARFYTPSGSAPYTSRVVTLWYRP-PELLLGATSYGTAVDLWSVGCILAELFLGKPILQGRTEVEQL  329 (560)
T ss_pred             EcCCCCEEeccccceeeccCCCCcccccceEEeeccC-hHHhcCCcccccceeehhhhHHHHHHHcCCCCcCCccHHHHH
Confidence            9999999999999999887444443444667999999 6665       478999999988 788888888887777777


Q ss_pred             HHHHH
Q 045577          335 VKCIE  339 (392)
Q Consensus       335 ~~~~~  339 (392)
                      .++.+
T Consensus       330 ~kIfk  334 (560)
T KOG0600|consen  330 HKIFK  334 (560)
T ss_pred             HHHHH
Confidence            65544

>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=99.89  E-value=1.2e-23  Score=197.82  Aligned_cols=159  Identities=21%  Similarity=0.279  Sum_probs=125.4

Q ss_pred             CeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEcC-CCCCeEeeeeceE
Q 045577          200 EVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDA-EINPNISDFGPAR  278 (392)
Q Consensus       200 ~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~~-~~~~kl~DFGla~  278 (392)
                      ..++.|||+.+|++.....+..+...+..+..+..||++||.|||++   +++||||||+|||++. ++.+||+|||+++
T Consensus        90 ~~~i~mEy~~~GsL~~~~~~~g~~l~E~~v~~ytr~iL~GL~ylHs~---g~vH~DiK~~NiLl~~~~~~~KlaDFG~a~  166 (313)
T KOG0198|consen   90 EYNIFMEYAPGGSLSDLIKRYGGKLPEPLVRRYTRQILEGLAYLHSK---GIVHCDIKPANILLDPSNGDVKLADFGLAK  166 (313)
T ss_pred             eeEeeeeccCCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhC---CEeccCcccceEEEeCCCCeEEeccCcccc
Confidence            58999999999999987777665457777899999999999999998   9999999999999999 7999999999998


Q ss_pred             EeCC--CCcceeceeeecccccCchhHHH-------HHHHhcCCCcc-eeecccccCCC------------------CCC
Q 045577          279 IFGD--QTEEVTGRVIGTQTLKTVPELLQ-------AWKLWSEGDPM-EIIDEQTKMKG------------------PFS  330 (392)
Q Consensus       279 ~~~~--~~~~~~~~~~gt~~y~a~~~~~~-------~~diws~G~v~-~~ld~~~~~~~------------------~~~  330 (392)
                      ....  ..........||+.||| ||+..       +.|+|+.||+. ||+.+.++...                  ..+
T Consensus       167 ~~~~~~~~~~~~~~~~Gtp~~ma-PEvi~~g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~~~~~~~~~~ig~~~~~P~ip  245 (313)
T KOG0198|consen  167 KLESKGTKSDSELSVQGTPNYMA-PEVIRNGEVARRESDIWSLGCTVVEMLTGKPPWSEFFEEAEALLLIGREDSLPEIP  245 (313)
T ss_pred             ccccccccccccccccCCccccC-chhhcCCCcCCccchhhhcCCEEEeccCCCCcchhhcchHHHHHHHhccCCCCCCC
Confidence            7652  22223345789999999 66654       78999999965 78876433222                  111


Q ss_pred             HHHHHHHHHHHHhhcccCcCCCCCHHHHHHHH
Q 045577          331 ADELVKCIEVGLLCVQQRIEDWPTMSSVLTML  362 (392)
Q Consensus       331 ~~~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~L  362 (392)
                      ........+++..|++.+|++|||++++++.-
T Consensus       246 ~~ls~~a~~Fl~~C~~~~p~~Rpta~eLL~hp  277 (313)
T KOG0198|consen  246 DSLSDEAKDFLRKCFKRDPEKRPTAEELLEHP  277 (313)
T ss_pred             cccCHHHHHHHHHHhhcCcccCcCHHHHhhCh
Confidence            11222455666799999999999999998764

>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.89  E-value=1.4e-24  Score=194.75  Aligned_cols=177  Identities=18%  Similarity=0.244  Sum_probs=132.1

Q ss_pred             CCCcccccc-CcCCCC-CeeEEecCccCCCcChhhhh---hhccccchhhhhHHHHHHHhhhhcCcCCCCc--eeecccc
Q 045577          185 SGGCKRNWE-ADCGDG-EVFLMFEGIKLPDKSEFTCE---FECSKYSSYVTNILYGIARVILYLPEDSRLE--IIHRDHK  257 (392)
Q Consensus       185 s~GCvR~~~-l~C~~~-~~~lv~e~~~~~~l~~~~~~---~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~--iiHrDlK  257 (392)
                      |++.|+... ..-++. -+++|||++..||+...+..   +.-+..+..+++++.|+++||..+|.. .++  |+|||||
T Consensus        77 HpNIVqYy~~~f~~~~evlnivmE~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~-~~r~~VmHRDIK  155 (375)
T KOG0591|consen   77 HPNIVQYYAHSFIEDNEVLNIVMELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSK-IPRGTVMHRDIK  155 (375)
T ss_pred             CchHHHHHHHhhhccchhhHHHHHhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhcc-ccccceeeccCc
Confidence            788887654 222334 48999999999999985543   333447778999999999999999993 224  9999999


Q ss_pred             cceeEEcCCCCCeEeeeeceEEeCCCCcceeceeeecccccCchhHHH------HHHHhcCCCcc-eeecccccCCCC--
Q 045577          258 TSNVLLDAEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELLQ------AWKLWSEGDPM-EIIDEQTKMKGP--  328 (392)
Q Consensus       258 p~NIll~~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~~------~~diws~G~v~-~~ld~~~~~~~~--  328 (392)
                      |.||+|+.+|.+|+.|||+++.+.... ......+|||.||+ ||...      ..|+|+.||++ ||..-++++.+.  
T Consensus       156 PaNIFl~~~gvvKLGDfGL~r~l~s~~-tfA~S~VGTPyYMS-PE~i~~~~Y~~kSDiWslGCllyEMcaL~~PF~g~n~  233 (375)
T KOG0591|consen  156 PANIFLTANGVVKLGDFGLGRFLSSKT-TFAHSLVGTPYYMS-PERIHESGYNFKSDIWSLGCLLYEMCALQSPFYGDNL  233 (375)
T ss_pred             chheEEcCCCceeeccchhHhHhcchh-HHHHhhcCCCcccC-HHHHhcCCCCcchhHHHHHHHHHHHHhcCCCcccccH
Confidence            999999999999999999999876433 33345899999999 77664      78999999987 333333344433  


Q ss_pred             -----------C---C-HHHHHHHHHHHHhhcccCcCCCCCHHHHHHHHcc
Q 045577          329 -----------F---S-ADELVKCIEVGLLCVQQRIEDWPTMSSVLTMLSN  364 (392)
Q Consensus       329 -----------~---~-~~~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~L~~  364 (392)
                                 +   + ..-...+.+++..|+..||+.||+...+++.+.+
T Consensus       234 ~~L~~KI~qgd~~~~p~~~YS~~l~~li~~ci~vd~~~RP~t~~~v~di~~  284 (375)
T KOG0591|consen  234 LSLCKKIEQGDYPPLPDEHYSTDLRELINMCIAVDPEQRPDTVPYVQDIQS  284 (375)
T ss_pred             HHHHHHHHcCCCCCCcHHHhhhHHHHHHHHHccCCcccCCCcchHHHHHHH
Confidence                       1   1 2233355667889999999999986666666544

>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.89  E-value=2.9e-24  Score=204.78  Aligned_cols=206  Identities=21%  Similarity=0.258  Sum_probs=150.7

Q ss_pred             cCCcccceecccCCCCCceEEEEeCCcceEeeecCC--------------CCCccccccCcCCCC-CeeEEecCccCCCc
Q 045577          149 TGWNQNIKAWNLEKSDTPQLVLWRRTEKVFRSWNGI--------------SGGCKRNWEADCGDG-EVFLMFEGIKLPDK  213 (392)
Q Consensus       149 tg~~~~l~s~kld~~g~~~l~~~~~~~~~w~~W~g~--------------s~GCvR~~~l~C~~~-~~~lv~e~~~~~~l  213 (392)
                      -|.+.+...|.........++..++-.+.+.+|...              |++.+...++.-++. .+|+|||||+.. +
T Consensus        18 lGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s~ee~~nLREvksL~kln~hpniikL~Evi~d~~~~L~fVfE~Md~N-L   96 (538)
T KOG0661|consen   18 LGDGTFGSVYLAKSKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNPHPNIIKLKEVIRDNDRILYFVFEFMDCN-L   96 (538)
T ss_pred             hcCCcceeEEEeeecCCCceeeHHHHHhhhccHHHHHHHHHHHHHHhcCCCCcchhhHHHhhccCceEeeeHHhhhhh-H
Confidence            355566666665544455555555444433334322              788888887776555 799999999954 4


Q ss_pred             ChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEcCCCCCeEeeeeceEEeCCCCcceeceeee
Q 045577          214 SEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEINPNISDFGPARIFGDQTEEVTGRVIG  293 (392)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~~~~~~~~~g  293 (392)
                      .+....+.-+..+..+.+|+.||.+||.|+|++   ++.|||+||+|||+.....+||+|||+|+....  ....+..+.
T Consensus        97 YqLmK~R~r~fse~~irnim~QilqGL~hiHk~---GfFHRDlKPENiLi~~~~~iKiaDFGLARev~S--kpPYTeYVS  171 (538)
T KOG0661|consen   97 YQLMKDRNRLFSESDIRNIMYQILQGLAHIHKH---GFFHRDLKPENILISGNDVIKIADFGLAREVRS--KPPYTEYVS  171 (538)
T ss_pred             HHHHhhcCCcCCHHHHHHHHHHHHHHHHHHHhc---CcccccCChhheEecccceeEeccccccccccc--CCCcchhhh
Confidence            333333444556777899999999999999998   999999999999999999999999999997652  223344778


Q ss_pred             cccccCchhHH-------HHHHHhcCCCcc-eeecccccCCCCCCHHHHHHHH---------------------------
Q 045577          294 TQTLKTVPELL-------QAWKLWSEGDPM-EIIDEQTKMKGPFSADELVKCI---------------------------  338 (392)
Q Consensus       294 t~~y~a~~~~~-------~~~diws~G~v~-~~ld~~~~~~~~~~~~~~~~~~---------------------------  338 (392)
                      |+.|.| ||++       ...|+|+.||++ |+..-++.++|....+++.+++                           
T Consensus       172 TRWYRA-PEvLLrs~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~sE~Dqi~KIc~VLGtP~~~~~~eg~~La~~mnf~~P~  250 (538)
T KOG0661|consen  172 TRWYRA-PEVLLRSGYYSSPVDMWAVGCIMAELYSLRPLFPGASEIDQIYKICEVLGTPDKDSWPEGYNLASAMNFRFPQ  250 (538)
T ss_pred             cccccc-hHHhhhccccCCchHHHHHHHHHHHHHHhcccCCCCcHHHHHHHHHHHhCCCccccchhHHHHHHHhccCCCc
Confidence            999999 6665       367999999987 4544455666665555555443                           


Q ss_pred             ------------------HHHHhhcccCcCCCCCHHHHHHH
Q 045577          339 ------------------EVGLLCVQQRIEDWPTMSSVLTM  361 (392)
Q Consensus       339 ------------------~i~~~Cl~~dp~~RPsm~eVv~~  361 (392)
                                        +++..|++-||++|||+.+.+++
T Consensus       251 ~~~~~l~~L~p~~s~~~~~li~~ll~WDP~kRpTA~~al~~  291 (538)
T KOG0661|consen  251 VKPSPLKDLLPNASSEAASLIERLLAWDPDKRPTASQALQH  291 (538)
T ss_pred             CCCCChHHhCcccCHHHHHHHHHHhcCCCccCccHHHHhcC
Confidence                              45668999999999999999876

>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.89  E-value=1.6e-23  Score=203.83  Aligned_cols=170  Identities=17%  Similarity=0.254  Sum_probs=135.0

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEc
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLD  264 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~  264 (392)
                      |++.|+..+..-.++++++|||||++|.+.+..-.  +...+.++..|++++++||+|||.+   +|+|||||..|||++
T Consensus       329 H~NiVnfl~Sylv~deLWVVMEym~ggsLTDvVt~--~~~~E~qIA~Icre~l~aL~fLH~~---gIiHrDIKSDnILL~  403 (550)
T KOG0578|consen  329 HPNIVNFLDSYLVGDELWVVMEYMEGGSLTDVVTK--TRMTEGQIAAICREILQGLKFLHAR---GIIHRDIKSDNILLT  403 (550)
T ss_pred             chHHHHHHHHhcccceeEEEEeecCCCchhhhhhc--ccccHHHHHHHHHHHHHHHHHHHhc---ceeeeccccceeEec
Confidence            88888877655445789999999999997663321  2244555788999999999999999   899999999999999


Q ss_pred             CCCCCeEeeeeceEEeCCCCcceeceeeecccccCchhHHH------HHHHhcCCCcc-eeecccccCCCCCCHHHHH--
Q 045577          265 AEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELLQ------AWKLWSEGDPM-EIIDEQTKMKGPFSADELV--  335 (392)
Q Consensus       265 ~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~~------~~diws~G~v~-~~ld~~~~~~~~~~~~~~~--  335 (392)
                      .++.+||.|||++..+..... ...+.+||+.||| ||+..      ..|||++|.+. ||+++++++..+.+...+.  
T Consensus       404 ~~g~vKltDFGFcaqi~~~~~-KR~TmVGTPYWMA-PEVvtrk~YG~KVDIWSLGIMaIEMveGEPPYlnE~PlrAlyLI  481 (550)
T KOG0578|consen  404 MDGSVKLTDFGFCAQISEEQS-KRSTMVGTPYWMA-PEVVTRKPYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLI  481 (550)
T ss_pred             cCCcEEEeeeeeeeccccccC-ccccccCCCCccc-hhhhhhcccCccccchhhhhHHHHHhcCCCCccCCChHHHHHHH
Confidence            999999999999988764332 4455899999999 77653      68999999865 9999987766544333332  


Q ss_pred             ----------------HHHHHHHhhcccCcCCCCCHHHHHHH
Q 045577          336 ----------------KCIEVGLLCVQQRIEDWPTMSSVLTM  361 (392)
Q Consensus       336 ----------------~~~~i~~~Cl~~dp~~RPsm~eVv~~  361 (392)
                                      .+.++..+|++.|+++||++.|+++.
T Consensus       482 a~ng~P~lk~~~klS~~~kdFL~~cL~~dv~~RasA~eLL~H  523 (550)
T KOG0578|consen  482 ATNGTPKLKNPEKLSPELKDFLDRCLVVDVEQRASAKELLEH  523 (550)
T ss_pred             hhcCCCCcCCccccCHHHHHHHHHHhhcchhcCCCHHHHhcC
Confidence                            33456679999999999999998864

>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]

Probab=99.89  E-value=4.3e-24  Score=193.40  Aligned_cols=170  Identities=21%  Similarity=0.289  Sum_probs=134.4

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEc
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLD  264 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~  264 (392)
                      |++-|-..+.+-.....++|+|||+..-+.+.+.. ........+.+++.|+++|+.|+|++   ++|||||||+|||++
T Consensus        60 H~NLVnLiEVFrrkrklhLVFE~~dhTvL~eLe~~-p~G~~~~~vk~~l~Q~l~ai~~cHk~---n~IHRDIKPENILit  135 (396)
T KOG0593|consen   60 HENLVNLIEVFRRKRKLHLVFEYCDHTVLHELERY-PNGVPSELVKKYLYQLLKAIHFCHKN---NCIHRDIKPENILIT  135 (396)
T ss_pred             cchHHHHHHHHHhcceeEEEeeecchHHHHHHHhc-cCCCCHHHHHHHHHHHHHHhhhhhhc---CeecccCChhheEEe
Confidence            77777776666666889999999998766554322 22234455899999999999999998   899999999999999


Q ss_pred             CCCCCeEeeeeceEEeCCCCcceeceeeecccccCchhHHH-------HHHHhcCCCcc-eeecccccCCCCCCHHHHH-
Q 045577          265 AEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELLQ-------AWKLWSEGDPM-EIIDEQTKMKGPFSADELV-  335 (392)
Q Consensus       265 ~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~~-------~~diws~G~v~-~~ld~~~~~~~~~~~~~~~-  335 (392)
                      .++.+|++|||+|+.+....... +..+.|.+|.| ||++.       .+|+|+.||++ |++++.+.+++..+.+++. 
T Consensus       136 ~~gvvKLCDFGFAR~L~~pgd~Y-TDYVATRWYRa-PELLvGDtqYG~pVDiWAiGCv~aEl~~G~pL~PG~SDiDQLy~  213 (396)
T KOG0593|consen  136 QNGVVKLCDFGFARTLSAPGDNY-TDYVATRWYRA-PELLVGDTQYGKPVDIWAIGCVFAELLTGEPLWPGRSDIDQLYL  213 (396)
T ss_pred             cCCcEEeccchhhHhhcCCcchh-hhhhhhhhccC-hhhhcccCcCCCcccchhhhHHHHHHhcCCcCCCCcchHHHHHH
Confidence            99999999999999886433333 34678999999 66653       68999999987 7778777777766666544 


Q ss_pred             ---------------------------------------------HHHHHHHhhcccCcCCCCCHHHHHH
Q 045577          336 ---------------------------------------------KCIEVGLLCVQQRIEDWPTMSSVLT  360 (392)
Q Consensus       336 ---------------------------------------------~~~~i~~~Cl~~dp~~RPsm~eVv~  360 (392)
                                                                   -+++++..|++.||++|++-++++.
T Consensus       214 I~ktLG~L~prhq~iF~~N~~F~Gv~lP~~~~~epLe~k~p~~s~~~ld~~k~cL~~dP~~R~sc~qll~  283 (396)
T KOG0593|consen  214 IRKTLGNLIPRHQSIFSSNPFFHGVRLPEPEHPEPLERKYPKISNVLLDLLKKCLKMDPDDRLSCEQLLH  283 (396)
T ss_pred             HHHHHcccCHHHHHHhccCCceeeeecCCCCCccchhhhcccchHHHHHHHHHHhcCCccccccHHHHhc
Confidence                                                         2345777999999999999988764

>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]

Probab=99.88  E-value=3e-23  Score=194.92  Aligned_cols=135  Identities=23%  Similarity=0.336  Sum_probs=110.7

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEc
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLD  264 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~  264 (392)
                      |++.|+..+....++.+|+|||||++|||..+..+... ..+..+..++.|+|.||++||++   +||||||||+||||+
T Consensus        68 H~nIV~l~d~~~~~~~i~lVMEyC~gGDLs~yi~~~~~-l~e~t~r~Fm~QLA~alq~L~~~---~IiHRDLKPQNiLLs  143 (429)
T KOG0595|consen   68 HPNIVRLLDCIEDDDFIYLVMEYCNGGDLSDYIRRRGR-LPEATARHFMQQLASALQFLHEN---NIIHRDLKPQNILLS  143 (429)
T ss_pred             CcceeeEEEEEecCCeEEEEEEeCCCCCHHHHHHHcCC-CCHHHHHHHHHHHHHHHHHHHHC---CeeeccCCcceEEec
Confidence            88888887766667889999999999999998776653 34555788999999999999999   899999999999997


Q ss_pred             CC------CCCeEeeeeceEEeCCCCcceeceeeecccccCchhHHH------HHHHhcCCCcc-eeecccccCC
Q 045577          265 AE------INPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELLQ------AWKLWSEGDPM-EIIDEQTKMK  326 (392)
Q Consensus       265 ~~------~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~~------~~diws~G~v~-~~ld~~~~~~  326 (392)
                      ..      -.+||+|||+|+.+.+  .....+.+|++-||| ||+..      +.|+|+.|+++ +++.+.+++.
T Consensus       144 ~~~~~~~~~~LKIADFGfAR~L~~--~~~a~tlcGSplYMA-PEV~~~~~YdAKADLWSiG~Ilyq~l~g~~Pf~  215 (429)
T KOG0595|consen  144 TTARNDTSPVLKIADFGFARFLQP--GSMAETLCGSPLYMA-PEVIMSQQYDAKADLWSIGTILYQCLTGKPPFD  215 (429)
T ss_pred             cCCCCCCCceEEecccchhhhCCc--hhHHHHhhCCccccC-HHHHHhccccchhhHHHHHHHHHHHHhCCCCcc
Confidence            65      4579999999998753  334455899999999 88763      78999999987 5666655544

>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]

Probab=99.88  E-value=2e-23  Score=194.18  Aligned_cols=126  Identities=22%  Similarity=0.260  Sum_probs=103.0

Q ss_pred             CCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEcCCCCCeEeeeece
Q 045577          198 DGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEINPNISDFGPA  277 (392)
Q Consensus       198 ~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~~~~~~kl~DFGla  277 (392)
                      .+++|+|+||+.+|+|.....++.+. .+..+.-++.+|+.||.|||++   +||||||||+|||||.+|+++|+|||++
T Consensus        97 ~~kLylVld~~~GGeLf~hL~~eg~F-~E~~arfYlaEi~lAL~~LH~~---gIiyRDlKPENILLd~~GHi~LtDFgL~  172 (357)
T KOG0598|consen   97 EEKLYLVLDYLNGGELFYHLQREGRF-SEDRARFYLAEIVLALGYLHSK---GIIYRDLKPENILLDEQGHIKLTDFGLC  172 (357)
T ss_pred             CCeEEEEEeccCCccHHHHHHhcCCc-chhHHHHHHHHHHHHHHHHHhC---CeeeccCCHHHeeecCCCcEEEeccccc
Confidence            57899999999999999876655433 3444677899999999999999   8999999999999999999999999999


Q ss_pred             EEeCCCCcceeceeeecccccCchhHH------HHHHHhcCCCcc-eeecccccCCCCC
Q 045577          278 RIFGDQTEEVTGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIIDEQTKMKGPF  329 (392)
Q Consensus       278 ~~~~~~~~~~~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld~~~~~~~~~  329 (392)
                      +..- .....+.+.+||+.||| ||+.      .++|.|++|+++ +|+.+.+++.+..
T Consensus       173 k~~~-~~~~~t~tfcGT~eYmA-PEil~~~gy~~~vDWWsLGillYeML~G~pPF~~~~  229 (357)
T KOG0598|consen  173 KEDL-KDGDATRTFCGTPEYMA-PEILLGKGYDKAVDWWSLGILLYEMLTGKPPFYAED  229 (357)
T ss_pred             hhcc-cCCCccccccCCccccC-hHHHhcCCCCcccchHhHHHHHHHHhhCCCCCcCcc
Confidence            8532 23334555899999999 7776      378999999987 6777766655443

>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]

Probab=99.88  E-value=1.6e-23  Score=203.06  Aligned_cols=177  Identities=20%  Similarity=0.235  Sum_probs=129.9

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhh-hhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEE
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCE-FECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLL  263 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~-~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll  263 (392)
                      |...|+.....-.++.+|+|||||+.|.|..+... ..........+.++.|||+||+||+++   ++|||||.++|||+
T Consensus       260 H~~lV~l~gV~~~~~piyIVtE~m~~GsLl~yLr~~~~~~l~~~~Ll~~a~qIaeGM~YLes~---~~IHRDLAARNiLV  336 (468)
T KOG0197|consen  260 HEKLVKLYGVCTKQEPIYIVTEYMPKGSLLDYLRTREGGLLNLPQLLDFAAQIAEGMAYLESK---NYIHRDLAARNILV  336 (468)
T ss_pred             ccCeEEEEEEEecCCceEEEEEecccCcHHHHhhhcCCCccchHHHHHHHHHHHHHHHHHHhC---Cccchhhhhhheee
Confidence            66666665543333559999999999998886665 333334455799999999999999988   89999999999999


Q ss_pred             cCCCCCeEeeeeceEEeCCCCcceeceeeecccccCchhHH------HHHHHhcCCCcc-eeecccccC-----------
Q 045577          264 DAEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIIDEQTKM-----------  325 (392)
Q Consensus       264 ~~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld~~~~~-----------  325 (392)
                      +++..+||+|||||+...+..-.......-...|.| ||..      .+.|+||+|+++ |++......           
T Consensus       337 ~~~~~vKIsDFGLAr~~~d~~Y~~~~~~kfPIkWtA-PEa~~~~~FS~kSDVWSFGVlL~E~fT~G~~py~~msn~ev~~  415 (468)
T KOG0197|consen  337 DEDLVVKISDFGLARLIGDDEYTASEGGKFPIKWTA-PEALNYGKFSSKSDVWSFGVLLWELFTYGRVPYPGMSNEEVLE  415 (468)
T ss_pred             ccCceEEEcccccccccCCCceeecCCCCCCceecC-HHHHhhCCcccccceeehhhhHHHHhccCCCCCCCCCHHHHHH
Confidence            999999999999999544322222222233456778 6654      378999999977 333322111           


Q ss_pred             ------CCCCCHHHHHHHHHHHHhhcccCcCCCCCHHHHHHHHccC
Q 045577          326 ------KGPFSADELVKCIEVGLLCVQQRIEDWPTMSSVLTMLSNE  365 (392)
Q Consensus       326 ------~~~~~~~~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~L~~~  365 (392)
                            +-+.+..+...+.+++..||..+|++|||++.+...|+..
T Consensus       416 ~le~GyRlp~P~~CP~~vY~lM~~CW~~~P~~RPtF~~L~~~l~~~  461 (468)
T KOG0197|consen  416 LLERGYRLPRPEGCPDEVYELMKSCWHEDPEDRPTFETLREVLEDF  461 (468)
T ss_pred             HHhccCcCCCCCCCCHHHHHHHHHHhhCCcccCCCHHHHHHHHHHh
Confidence                  1122333445677789999999999999999999988875

>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]

Probab=99.87  E-value=1.9e-22  Score=179.89  Aligned_cols=171  Identities=20%  Similarity=0.232  Sum_probs=134.9

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEc
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLD  264 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~  264 (392)
                      |++.+...+.+-..+..-+|+|||+. |+...+..+.-......+..++.++.+||+|||++   .|+|||+||.|+|++
T Consensus        60 h~nIi~LiD~F~~~~~l~lVfEfm~t-dLe~vIkd~~i~l~pa~iK~y~~m~LkGl~y~H~~---~IlHRDlKPnNLLis  135 (318)
T KOG0659|consen   60 HPNIIELIDVFPHKSNLSLVFEFMPT-DLEVVIKDKNIILSPADIKSYMLMTLKGLAYCHSK---WILHRDLKPNNLLIS  135 (318)
T ss_pred             CcchhhhhhhccCCCceEEEEEeccc-cHHHHhcccccccCHHHHHHHHHHHHHHHHHHHhh---hhhcccCCccceEEc
Confidence            77777777666556789999999984 55554444444444555889999999999999999   899999999999999


Q ss_pred             CCCCCeEeeeeceEEeCCCCcceeceeeecccccCchhHHH-------HHHHhcCCCcc-eeecccccCCCCCCHHHHH-
Q 045577          265 AEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELLQ-------AWKLWSEGDPM-EIIDEQTKMKGPFSADELV-  335 (392)
Q Consensus       265 ~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~~-------~~diws~G~v~-~~ld~~~~~~~~~~~~~~~-  335 (392)
                      .+|.+||+|||+|+.++......+. .+-|..|.| ||++.       +.|+|+.||++ |++.+.+.+++..+.+++. 
T Consensus       136 ~~g~lKiADFGLAr~f~~p~~~~~~-~V~TRWYRA-PELLfGsr~Yg~~VDmWavGCI~AELllr~P~fpG~sDidQL~~  213 (318)
T KOG0659|consen  136 SDGQLKIADFGLARFFGSPNRIQTH-QVVTRWYRA-PELLFGSRQYGTGVDMWAVGCIFAELLLRVPFFPGDSDIDQLSK  213 (318)
T ss_pred             CCCcEEeecccchhccCCCCccccc-ceeeeeccC-hHHhccchhcCCcchhhhHHHHHHHHHccCCCCCCCchHHHHHH
Confidence            9999999999999998855444443 367899999 77664       67999999987 6676666777776666655 


Q ss_pred             ------------------------------------------HHHHHHHhhcccCcCCCCCHHHHHHH
Q 045577          336 ------------------------------------------KCIEVGLLCVQQRIEDWPTMSSVLTM  361 (392)
Q Consensus       336 ------------------------------------------~~~~i~~~Cl~~dp~~RPsm~eVv~~  361 (392)
                                                                ..+++...++..||.+|.+++|.+++
T Consensus       214 If~~LGTP~~~~WP~~~~lpdY~~~~~~P~~~~~~lf~aas~d~ldLl~~m~~ynP~~Rita~qaL~~  281 (318)
T KOG0659|consen  214 IFRALGTPTPDQWPEMTSLPDYVKIQQFPKPPLNNLFPAASSDALDLLSKMLTYNPKKRITASQALKH  281 (318)
T ss_pred             HHHHcCCCCcccCccccccccHHHHhcCCCCccccccccccHHHHHHHHhhhccCchhcccHHHHhcc
Confidence                                                      33456668999999999999998876

>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]

Probab=99.87  E-value=6e-23  Score=188.26  Aligned_cols=184  Identities=23%  Similarity=0.269  Sum_probs=134.6

Q ss_pred             CCCccccccC--cCCCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeE
Q 045577          185 SGGCKRNWEA--DCGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVL  262 (392)
Q Consensus       185 s~GCvR~~~l--~C~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIl  262 (392)
                      |++.|...+.  .|.-+++|+|||||+.+.....+ .-........+..++.|+++|++|||.+   .|+|||||++|+|
T Consensus       134 H~NIV~vkEVVvG~~~d~iy~VMe~~EhDLksl~d-~m~q~F~~~evK~L~~QlL~glk~lH~~---wilHRDLK~SNLL  209 (419)
T KOG0663|consen  134 HPNIVEVKEVVVGSNMDKIYIVMEYVEHDLKSLME-TMKQPFLPGEVKTLMLQLLRGLKHLHDN---WILHRDLKTSNLL  209 (419)
T ss_pred             CCCeeeeEEEEeccccceeeeeHHHHHhhHHHHHH-hccCCCchHHHHHHHHHHHHHHHHHhhc---eeEecccchhhee
Confidence            8888877554  46668899999999964322222 1111223334677899999999999998   8999999999999


Q ss_pred             EcCCCCCeEeeeeceEEeCCCCcceeceeeecccccCchhHH-------HHHHHhcCCCcc-eeecccccCCCCCCHHHH
Q 045577          263 LDAEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELL-------QAWKLWSEGDPM-EIIDEQTKMKGPFSADEL  334 (392)
Q Consensus       263 l~~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~-------~~~diws~G~v~-~~ld~~~~~~~~~~~~~~  334 (392)
                      +...|.+||+|||+|+.++......+. .+-|..|.| ||++       .+.|+||.||++ |++...+.+++....+++
T Consensus       210 m~~~G~lKiaDFGLAR~ygsp~k~~T~-lVVTLWYRa-PELLLG~~tyst~iDMWSvGCI~aE~l~~kPlf~G~sE~dQl  287 (419)
T KOG0663|consen  210 LSHKGILKIADFGLAREYGSPLKPYTP-LVVTLWYRA-PELLLGAKTYSTAVDMWSVGCIFAELLTQKPLFPGKSEIDQL  287 (419)
T ss_pred             eccCCcEEecccchhhhhcCCcccCcc-eEEEeeecC-HHHhcCCcccCcchhhhhHHHHHHHHHhcCCCCCCCchHHHH
Confidence            999999999999999998755444444 677999999 6654       478999999987 667776677776666666


Q ss_pred             HHHHH-----------------------------------------------HHHhhcccCcCCCCCHHHHHHHHccCCC
Q 045577          335 VKCIE-----------------------------------------------VGLLCVQQRIEDWPTMSSVLTMLSNESI  367 (392)
Q Consensus       335 ~~~~~-----------------------------------------------i~~~Cl~~dp~~RPsm~eVv~~L~~~~~  367 (392)
                      .++.+                                               +....+..||.+|-|+++.++.  +-..
T Consensus       288 ~~If~llGtPte~iwpg~~~lp~~k~~~f~~~pyn~lr~kF~~~~lse~g~~Lln~llt~dP~kR~tA~~~L~h--~~F~  365 (419)
T KOG0663|consen  288 DKIFKLLGTPSEAIWPGYSELPAVKKMTFSEHPYNNLRKKFGALSLSEQGFDLLNKLLTYDPGKRITAEDGLKH--EYFR  365 (419)
T ss_pred             HHHHHHhCCCccccCCCccccchhhccccCCCCchhhhhhccccccchhHHHHHHHHhccCccccccHHHhhcc--cccc
Confidence            65443                                               3335667899999998887654  2234


Q ss_pred             CCCCCCCcc
Q 045577          368 KVPQPEEVC  376 (392)
Q Consensus       368 ~~~~p~~p~  376 (392)
                      +.|.|..|.
T Consensus       366 e~P~p~~P~  374 (419)
T KOG0663|consen  366 ETPLPIDPS  374 (419)
T ss_pred             cCCCCCChh
Confidence            445554444

>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.87  E-value=2.4e-22  Score=195.53  Aligned_cols=169  Identities=18%  Similarity=0.199  Sum_probs=131.1

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEc
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLD  264 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~  264 (392)
                      |++.+|..+........|+||||+.+|++.....+.. ...+..+.+++.|++.|+.|||+.   +|+||||||+|||++
T Consensus        79 HpnI~~l~ev~~t~~~~~ivmEy~~gGdL~~~i~~~g-~l~E~~ar~~F~Qlisav~y~H~~---gi~HRDLK~ENilld  154 (370)
T KOG0583|consen   79 HPNIIRLLEVFATPTKIYIVMEYCSGGDLFDYIVNKG-RLKEDEARKYFRQLISAVAYCHSR---GIVHRDLKPENILLD  154 (370)
T ss_pred             CCCEeEEEEEEecCCeEEEEEEecCCccHHHHHHHcC-CCChHHHHHHHHHHHHHHHHHHhC---CEeeCCCCHHHEEec
Confidence            6677777776655667999999999999998877733 334456889999999999999998   999999999999999


Q ss_pred             CC-CCCeEeeeeceEEeCCCCcceeceeeecccccCchhHH--------HHHHHhcCCCcceee-cccccCCCCC-----
Q 045577          265 AE-INPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELL--------QAWKLWSEGDPMEII-DEQTKMKGPF-----  329 (392)
Q Consensus       265 ~~-~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~--------~~~diws~G~v~~~l-d~~~~~~~~~-----  329 (392)
                      .+ +.+||+|||++.... .........+||+.|+| ||+.        .+.|+||.|+++..+ .+..++....     
T Consensus       155 ~~~~~~Kl~DFG~s~~~~-~~~~~l~t~cGsp~Y~a-PEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~~PF~d~~~~~l~  232 (370)
T KOG0583|consen  155 GNEGNLKLSDFGLSAISP-GEDGLLKTFCGSPAYAA-PEVLSGKGTYSGKAADVWSLGVILYVLLCGRLPFDDSNVPNLY  232 (370)
T ss_pred             CCCCCEEEeccccccccC-CCCCcccCCCCCcccCC-HHHhCCCCCcCCchhhhhhhHHHHHHHHhCCCCCCCccHHHHH
Confidence            99 999999999998863 22334455799999999 7765        367999999988433 3322222111     


Q ss_pred             ----------CHHH-HHHHHHHHHhhcccCcCCCCCHHHHH
Q 045577          330 ----------SADE-LVKCIEVGLLCVQQRIEDWPTMSSVL  359 (392)
Q Consensus       330 ----------~~~~-~~~~~~i~~~Cl~~dp~~RPsm~eVv  359 (392)
                                +... ...+..++.+|++.+|..|+++.+|+
T Consensus       233 ~ki~~~~~~~p~~~~S~~~~~Li~~mL~~~P~~R~t~~~i~  273 (370)
T KOG0583|consen  233 RKIRKGEFKIPSYLLSPEARSLIEKMLVPDPSTRITLLEIL  273 (370)
T ss_pred             HHHhcCCccCCCCcCCHHHHHHHHHHcCCCcccCCCHHHHh
Confidence                      1111 34566777899999999999999999

>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]

Probab=99.86  E-value=5.2e-22  Score=179.49  Aligned_cols=132  Identities=22%  Similarity=0.260  Sum_probs=106.5

Q ss_pred             CCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEcCCCCCeEeeeece
Q 045577          198 DGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEINPNISDFGPA  277 (392)
Q Consensus       198 ~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~~~~~~kl~DFGla  277 (392)
                      .+.+|++|||+++|.++....+.. ...+..+..++.||+.||+|||+.   .|++||+||+|||||.+|.+||.|||.|
T Consensus       116 ~~~lymvmeyv~GGElFS~Lrk~~-rF~e~~arFYAAeivlAleylH~~---~iiYRDLKPENiLlD~~G~iKitDFGFA  191 (355)
T KOG0616|consen  116 NSNLYMVMEYVPGGELFSYLRKSG-RFSEPHARFYAAEIVLALEYLHSL---DIIYRDLKPENLLLDQNGHIKITDFGFA  191 (355)
T ss_pred             CCeEEEEEeccCCccHHHHHHhcC-CCCchhHHHHHHHHHHHHHHHHhc---CeeeccCChHHeeeccCCcEEEEeccce
Confidence            567999999999999987654322 224445678999999999999998   8999999999999999999999999999


Q ss_pred             EEeCCCCcceeceeeecccccCchhHHH------HHHHhcCCCcc-eeecccccCCCCCCHHHHHHHH
Q 045577          278 RIFGDQTEEVTGRVIGTQTLKTVPELLQ------AWKLWSEGDPM-EIIDEQTKMKGPFSADELVKCI  338 (392)
Q Consensus       278 ~~~~~~~~~~~~~~~gt~~y~a~~~~~~------~~diws~G~v~-~~ld~~~~~~~~~~~~~~~~~~  338 (392)
                      +....    .+-+.+||+.|+| ||+..      ++|.|++|++. ||+.+.+++....+....++++
T Consensus       192 K~v~~----rT~TlCGTPeYLA-PEii~sk~ynkavDWWalGVLIYEMlaG~pPF~~~~~~~iY~KI~  254 (355)
T KOG0616|consen  192 KRVSG----RTWTLCGTPEYLA-PEIIQSKGYNKAVDWWALGVLIYEMLAGYPPFYDDNPIQIYEKIL  254 (355)
T ss_pred             EEecC----cEEEecCCccccC-hHHhhcCCCCcchhHHHHHHHHHHHHcCCCCCcCCChHHHHHHHH
Confidence            98642    2556899999999 77763      78999999876 7888877776665544444443

>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]

Probab=99.86  E-value=2.3e-22  Score=194.28  Aligned_cols=172  Identities=20%  Similarity=0.277  Sum_probs=136.8

Q ss_pred             CCCccccccCcCCCCC-eeEEecCccCCCcChhhhhhh-ccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeE
Q 045577          185 SGGCKRNWEADCGDGE-VFLMFEGIKLPDKSEFTCEFE-CSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVL  262 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~-~~lv~e~~~~~~l~~~~~~~~-~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIl  262 (392)
                      |+..|...+.+-+++. .++||+|+++|++...+.++. -...+..+.+++.|++.|+.|||++   .|+|||||+.||+
T Consensus        62 hP~iv~y~ds~~~~~~~l~Ivm~Y~eGg~l~~~i~~~k~~~f~E~~i~~~~~Q~~~av~ylH~~---~iLHRDlK~~Nif  138 (426)
T KOG0589|consen   62 HPNIVEYKDSFEEDGQLLCIVMEYCEGGDLAQLIKEQKGVLFPEERILKWFVQILLAVNYLHEN---RVLHRDLKCANIF  138 (426)
T ss_pred             CCCeeeeccchhcCCceEEEEEeecCCCCHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhh---hhhcccchhhhhh
Confidence            7888888777776777 999999999999998665554 4446677899999999999999988   8999999999999


Q ss_pred             EcCCCCCeEeeeeceEEeCCCCcceeceeeecccccCchhHH------HHHHHhcCCCcc-eeecccccCCCCCCHH---
Q 045577          263 LDAEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIIDEQTKMKGPFSAD---  332 (392)
Q Consensus       263 l~~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld~~~~~~~~~~~~---  332 (392)
                      +..+..+||.|||+|+.+.... .......||+.||+ ||+.      .+.|+|++||++ |+.+-++.+.......   
T Consensus       139 ltk~~~VkLgDfGlaK~l~~~~-~~a~tvvGTp~Ymc-PEil~d~pYn~KSDiWsLGC~~yEm~~lk~aF~a~~m~~Li~  216 (426)
T KOG0589|consen  139 LTKDKKVKLGDFGLAKILNPED-SLASTVVGTPYYMC-PEILSDIPYNEKSDIWSLGCCLYEMCTLKPAFKASNMSELIL  216 (426)
T ss_pred             ccccCceeecchhhhhhcCCch-hhhheecCCCcccC-HHHhCCCCCCccCcchhhcchHHHHHhcccccCccchHHHHH
Confidence            9999999999999999987443 24455899999999 8876      478999999987 4444444443332222   


Q ss_pred             -------------HHHHHHHHHHhhcccCcCCCCCHHHHHHH
Q 045577          333 -------------ELVKCIEVGLLCVQQRIEDWPTMSSVLTM  361 (392)
Q Consensus       333 -------------~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~  361 (392)
                                   ....+..++..|++.+|+.||++.+++.+
T Consensus       217 ki~~~~~~Plp~~ys~el~~lv~~~l~~~P~~RPsa~~LL~~  258 (426)
T KOG0589|consen  217 KINRGLYSPLPSMYSSELRSLVKSMLRKNPEHRPSALELLRR  258 (426)
T ss_pred             HHhhccCCCCCccccHHHHHHHHHHhhcCCccCCCHHHHhhC
Confidence                         22244456779999999999999998865

>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3

Probab=99.86  E-value=3.7e-22  Score=192.87  Aligned_cols=134  Identities=24%  Similarity=0.328  Sum_probs=100.5

Q ss_pred             hhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEcCCCCCeEeeeeceEEeCCCCc-ceeceeeecccccCchhHH--
Q 045577          228 YVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEINPNISDFGPARIFGDQTE-EVTGRVIGTQTLKTVPELL--  304 (392)
Q Consensus       228 ~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~~-~~~~~~~gt~~y~a~~~~~--  304 (392)
                      .+..++.||+.||.|||+.   +|+||||||+||+++.++.+||+|||+++....... .......++..|+| ||..  
T Consensus       175 ~~~~~~~qi~~aL~~LH~~---~ivHrDiKp~Nil~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y~a-PE~~~~  250 (338)
T cd05102         175 DLICYSFQVARGMEFLASR---KCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGSARLPLKWMA-PESIFD  250 (338)
T ss_pred             HHHHHHHHHHHHHHHHHHC---CEECCCCccceEEEcCCCcEEEeecccccccccCcchhcccCCCCCccccC-cHHhhc
Confidence            3577899999999999998   899999999999999999999999999986542211 12222345678999 6654  


Q ss_pred             ----HHHHHhcCCCcc-eeec-ccccCCCCCCH-----------------HHHHHHHHHHHhhcccCcCCCCCHHHHHHH
Q 045577          305 ----QAWKLWSEGDPM-EIID-EQTKMKGPFSA-----------------DELVKCIEVGLLCVQQRIEDWPTMSSVLTM  361 (392)
Q Consensus       305 ----~~~diws~G~v~-~~ld-~~~~~~~~~~~-----------------~~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~  361 (392)
                          .+.|+|+.|+++ +++. +..++.+....                 .....+.+++..|++.+|++||++.+++++
T Consensus       251 ~~~~~~sDiwslG~il~el~~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~el~~~  330 (338)
T cd05102         251 KVYTTQSDVWSFGVLLWEIFSLGASPYPGVQINEEFCQRLKDGTRMRAPENATPEIYRIMLACWQGDPKERPTFSALVEI  330 (338)
T ss_pred             CCCCcccCHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence                357999999876 4443 43333221111                 112356778889999999999999999999


Q ss_pred             HccC
Q 045577          362 LSNE  365 (392)
Q Consensus       362 L~~~  365 (392)
                      |+..
T Consensus       331 l~~~  334 (338)
T cd05102         331 LGDL  334 (338)
T ss_pred             HHHH
Confidence            9875

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V

>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=99.86  E-value=4.1e-22  Score=190.09  Aligned_cols=172  Identities=21%  Similarity=0.243  Sum_probs=129.1

Q ss_pred             CCCccccccCc--CCCCCeeEEecCccCCCcChhhhhhhcc-ccchhhhhHHHHHHHhhhhcCcCCCCceeeccccccee
Q 045577          185 SGGCKRNWEAD--CGDGEVFLMFEGIKLPDKSEFTCEFECS-KYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNV  261 (392)
Q Consensus       185 s~GCvR~~~l~--C~~~~~~lv~e~~~~~~l~~~~~~~~~~-~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NI  261 (392)
                      |++.|+..+.-  =.+..+|+|+|||..|....  |...+. ....++.+|+.++..||+|||.+   +||||||||+|+
T Consensus       167 H~nVV~LiEvLDDP~s~~~YlVley~s~G~v~w--~p~d~~els~~~Ar~ylrDvv~GLEYLH~Q---giiHRDIKPsNL  241 (576)
T KOG0585|consen  167 HPNVVKLIEVLDDPESDKLYLVLEYCSKGEVKW--CPPDKPELSEQQARKYLRDVVLGLEYLHYQ---GIIHRDIKPSNL  241 (576)
T ss_pred             CcCeeEEEEeecCcccCceEEEEEeccCCcccc--CCCCcccccHHHHHHHHHHHHHHHHHHHhc---Ceeccccchhhe
Confidence            77777776542  23578999999999888754  444444 45566899999999999999998   999999999999


Q ss_pred             EEcCCCCCeEeeeeceEEeCC----CCcceeceeeecccccCchhHH----------HHHHHhcCCCcce-eecccccCC
Q 045577          262 LLDAEINPNISDFGPARIFGD----QTEEVTGRVIGTQTLKTVPELL----------QAWKLWSEGDPME-IIDEQTKMK  326 (392)
Q Consensus       262 ll~~~~~~kl~DFGla~~~~~----~~~~~~~~~~gt~~y~a~~~~~----------~~~diws~G~v~~-~ld~~~~~~  326 (392)
                      |+++++.+||+|||.+..+..    .........+||+.||| ||..          .+.|+|+.|..++ ++-++.+|.
T Consensus       242 Ll~~~g~VKIsDFGVs~~~~~~~~~~~d~~L~~tvGTPAF~A-PE~c~~~~~~~~~g~a~DiWalGVTLYCllfG~~PF~  320 (576)
T KOG0585|consen  242 LLSSDGTVKISDFGVSNEFPQGSDEGSDDQLSRTVGTPAFFA-PELCSGGNSFSYSGFALDIWALGVTLYCLLFGQLPFF  320 (576)
T ss_pred             EEcCCCcEEeeccceeeecccCCccccHHHHhhcCCCccccc-hHhhcCCCCccccchhhhhhhhhhhHHHhhhccCCcc
Confidence            999999999999999987631    11222334789999999 6654          3679999998763 344444444


Q ss_pred             CCCCH-----------------HHHHHHHHHHHhhcccCcCCCCCHHHHHHHH
Q 045577          327 GPFSA-----------------DELVKCIEVGLLCVQQRIEDWPTMSSVLTML  362 (392)
Q Consensus       327 ~~~~~-----------------~~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~L  362 (392)
                      +++..                 +....+-+++..+++.||++|-++.+|....
T Consensus       321 ~~~~~~l~~KIvn~pL~fP~~pe~~e~~kDli~~lL~KdP~~Ri~l~~ik~Hp  373 (576)
T KOG0585|consen  321 DDFELELFDKIVNDPLEFPENPEINEDLKDLIKRLLEKDPEQRITLPDIKLHP  373 (576)
T ss_pred             cchHHHHHHHHhcCcccCCCcccccHHHHHHHHHHhhcChhheeehhhheecc
Confidence            33322                 2344555688899999999999999987664

>cd00028 B_lectin Bulb-type mannose-specific lectin

Probab=99.85  E-value=6.2e-21  Score=155.62  Aligned_cols=102  Identities=32%  Similarity=0.546  Sum_probs=83.9

Q ss_pred             cCCCcEEecCCCeEEeeecCCCCCCceEEEEEEeCCCCceEEEecCCCCccc----cccCCCCC-------ceEEEecCC
Q 045577           28 TEVRDILLAPSTLWGGNSLIPGNSSQSFLVISYKNLPPLVIWVANRNGSINS----NLSQDNDL-------GIIWNVILP   96 (392)
Q Consensus        28 ~~~~~~l~s~~~~f~~gf~~~~~~~~~~~~i~~~~~~~~~vW~anr~~p~~~----~~~~~~~~-------~~~w~~~~~   96 (392)
                      ...+++|+|+++.|++|||.+......+.+|||...+.++||+|||+.|...    .|..||+|       .++|++++.
T Consensus         4 l~~~~~l~s~~~~f~~G~~~~~~q~~dgnlv~~~~~~~~~vW~snt~~~~~~~~~l~l~~dGnLvl~~~~g~~vW~S~~~   83 (116)
T cd00028           4 LSSGQTLVSSGSLFELGFFKLIMQSRDYNLILYKGSSRTVVWVANRDNPSGSSCTLTLQSDGNLVIYDGSGTVVWSSNTT   83 (116)
T ss_pred             cCCCCEEEeCCCcEEEecccCCCCCCeEEEEEEeCCCCeEEEECCCCCCCCCCEEEEEecCCCeEEEcCCCcEEEEeccc
Confidence            3457999999999999999986543489999998866689999999988543    56678887       589999975


Q ss_pred             CCCCCceEEEecCCCeEEEeccCCCCCceEEeeecCC
Q 045577           97 RATGSPALQLLVAGNLVLREFSLSHSEGYLWESFDSP  133 (392)
Q Consensus        97 ~~~~~~~~~l~d~Gnlvl~~~~~~~~~~~~Wqsfd~p  133 (392)
                      ...+..+++|+|+|||||++.+    +.+||||||||
T Consensus        84 ~~~~~~~~~L~ddGnlvl~~~~----~~~~W~Sf~~P  116 (116)
T cd00028          84 RVNGNYVLVLLDDGNLVLYDSD----GNFLWQSFDYP  116 (116)
T ss_pred             CCCCceEEEEeCCCCEEEECCC----CCEEEcCCCCC
Confidence            4345678899999999998754    67899999999

The domain contains a three-fold internal repeat (beta-prism architecture). The consensus sequence motif QXDXNXVXY is involved in alpha-D-mannose recognition. Lectins are carbohydrate-binding proteins which specifically recognize diverse carbohydrates and mediate a wide variety of biological processes, such as cell-cell and host-pathogen interactions, serum glycoprotein turnover, and innate immune responses.

>PF01453 B_lectin: D-mannose binding lectin; InterPro: IPR001480 A bulb lectin super-family (Amaryllidaceae, Orchidaceae and Aliaceae) contains a ~115-residue-long domain whose overall three dimensional fold is very similar to that of [, ]: Dictyostelium discoideum comitin, an actin binding protein Curculigo latifolia curculin, a sweet tasting and taste-modifying protein This domain generally binds mannose, but in at least one protein, curculin, it is apparently devoid of mannose-binding activity

Probab=99.85  E-value=1.2e-22  Score=164.59  Aligned_cols=92  Identities=41%  Similarity=0.671  Sum_probs=64.3

Q ss_pred             CceEEEecCCCCccc-------cccCCCCC-------ceEEEe-cCCCCC-CCceEEEecCCCeEEEeccCCCCCceEEe
Q 045577           65 PLVIWVANRNGSINS-------NLSQDNDL-------GIIWNV-ILPRAT-GSPALQLLVAGNLVLREFSLSHSEGYLWE  128 (392)
Q Consensus        65 ~~~vW~anr~~p~~~-------~~~~~~~~-------~~~w~~-~~~~~~-~~~~~~l~d~Gnlvl~~~~~~~~~~~~Wq  128 (392)
                      .||||+|||++|+..       .+..||+|       +.+|++ ++.... ....|.|+|+|||||++.    .+.++||
T Consensus         2 ~tvvW~an~~~p~~~~s~~~~L~l~~dGnLvl~~~~~~~iWss~~t~~~~~~~~~~~L~~~GNlvl~d~----~~~~lW~   77 (114)
T PF01453_consen    2 RTVVWVANRNSPLTSSSGNYTLILQSDGNLVLYDSNGSVIWSSNNTSGRGNSGCYLVLQDDGNLVLYDS----SGNVLWQ   77 (114)
T ss_dssp             --------TTEEEEECETTEEEEEETTSEEEEEETTTEEEEE--S-TTSS-SSEEEEEETTSEEEEEET----TSEEEEE
T ss_pred             cccccccccccccccccccccceECCCCeEEEEcCCCCEEEEecccCCccccCeEEEEeCCCCEEEEee----cceEEEe
Confidence            489999999999932       46788988       479999 443322 467899999999999874    3789999


Q ss_pred             eecCCCCccCCCCccccccccCCcccceeccc
Q 045577          129 SFDSPSDTILPGMKRGMNLRTGWNQNIKAWNL  160 (392)
Q Consensus       129 sfd~ptdt~l~~~~~~~~~~tg~~~~l~s~kl  160 (392)
                      ||||||||+||+|+++.+..++....+++|+-
T Consensus        78 Sf~~ptdt~L~~q~l~~~~~~~~~~~~~sw~s  109 (114)
T PF01453_consen   78 SFDYPTDTLLPGQKLGDGNVTGKNDSLTSWSS  109 (114)
T ss_dssp             STTSSS-EEEEEET--TSEEEEESTSSEEEES
T ss_pred             ecCCCccEEEeccCcccCCCccccceEEeECC
Confidence            99999999999999998777766667888873

Each bulb-type lectin domain consists of three sequential beta-sheet subdomains (I, II, III) that are inter-related by pseudo three-fold symmetry. The three subdomains are flat four-stranded, antiparrallel beta-sheets. Together they form a 12-stranded beta-barrel in which the barrel axis coincides with the pseudo 3-fold axis.; GO: 0005529 sugar binding; PDB: 3M7H_A 3M7J_B 3MEZ_D 1DLP_A 1BWU_D 1KJ1_A 1B2P_A 1XD6_A 2DPF_C 2D04_B ....

>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.85  E-value=8e-22  Score=194.68  Aligned_cols=173  Identities=18%  Similarity=0.204  Sum_probs=134.1

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEc
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLD  264 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~  264 (392)
                      |++..|+........++|+|+||+++|.++....++..+. +..+.+++.||..|+.|+|..   +|+|||+||+|+|||
T Consensus        71 HpnVl~LydVwe~~~~lylvlEyv~gGELFdylv~kG~l~-e~eaa~ff~QIi~gv~yCH~~---~icHRDLKpENlLLd  146 (786)
T KOG0588|consen   71 HPNVLRLYDVWENKQHLYLVLEYVPGGELFDYLVRKGPLP-EREAAHFFRQILDGVSYCHAF---NICHRDLKPENLLLD  146 (786)
T ss_pred             CCCeeeeeeeeccCceEEEEEEecCCchhHHHHHhhCCCC-CHHHHHHHHHHHHHHHHHhhh---cceeccCCchhhhhh
Confidence            5555556555555788999999999999988776655444 444788999999999999998   899999999999999


Q ss_pred             CCCCCeEeeeeceEEeCCCCcceeceeeecccccCchhHHH-------HHHHhcCCCcc-eeecccccCCCCCCHHHHH-
Q 045577          265 AEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELLQ-------AWKLWSEGDPM-EIIDEQTKMKGPFSADELV-  335 (392)
Q Consensus       265 ~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~~-------~~diws~G~v~-~~ld~~~~~~~~~~~~~~~-  335 (392)
                      ..+.+||+|||+|....+  .....+.+|++.|.+ ||+..       +.|+|+.|+++ .++.++.+|. +.+...+. 
T Consensus       147 ~~~nIKIADFGMAsLe~~--gklLeTSCGSPHYA~-PEIV~G~pYdG~~sDVWSCGVILfALLtG~LPFd-DdNir~LLl  222 (786)
T KOG0588|consen  147 VKNNIKIADFGMASLEVP--GKLLETSCGSPHYAA-PEIVSGRPYDGRPSDVWSCGVILFALLTGKLPFD-DDNIRVLLL  222 (786)
T ss_pred             cccCEeeeccceeecccC--CccccccCCCcccCC-chhhcCCCCCCCccccchhHHHHHHHHhCCCCCC-CccHHHHHH
Confidence            999999999999987543  334455799999999 77763       67999999987 4555644443 32332222 


Q ss_pred             ---------------HHHHHHHhhcccCcCCCCCHHHHHHH--HccC
Q 045577          336 ---------------KCIEVGLLCVQQRIEDWPTMSSVLTM--LSNE  365 (392)
Q Consensus       336 ---------------~~~~i~~~Cl~~dp~~RPsm~eVv~~--L~~~  365 (392)
                                     .+.+++..++..||+.|-|+++|++.  |.+.
T Consensus       223 KV~~G~f~MPs~Is~eaQdLLr~ml~VDp~~RiT~~eI~kHP~l~g~  269 (786)
T KOG0588|consen  223 KVQRGVFEMPSNISSEAQDLLRRMLDVDPSTRITTEEILKHPFLSGY  269 (786)
T ss_pred             HHHcCcccCCCcCCHHHHHHHHHHhccCccccccHHHHhhCchhhcC
Confidence                           34457779999999999999999976  4443

>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.84  E-value=5.5e-21  Score=189.13  Aligned_cols=172  Identities=23%  Similarity=0.264  Sum_probs=136.9

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhccc--cchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeE
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSK--YSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVL  262 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~~--~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIl  262 (392)
                      |.+.||.....-++|-.-+-||.+++|.+...........  -+..+-.+..||.+||.|||++   .|+|||||-.|+|
T Consensus       631 HkNIVrYLGs~senGf~kIFMEqVPGGSLSsLLrskWGPlKDNEstm~fYtkQILeGLkYLHen---~IVHRDIKGDNVL  707 (1226)
T KOG4279|consen  631 HKNIVRYLGSVSENGFFKIFMEQVPGGSLSSLLRSKWGPLKDNESTMNFYTKQILEGLKYLHEN---KIVHRDIKGDNVL  707 (1226)
T ss_pred             hHhHHHHhhccCCCCeEEEEeecCCCCcHHHHHHhccCCCccchhHHHHHHHHHHHHhhhhhhc---ceeeccccCCcEE
Confidence            7888888776444566668899999999988665554443  4555777899999999999999   8999999999999


Q ss_pred             Ec-CCCCCeEeeeeceEEeCCCCcceeceeeecccccCchhHH--------HHHHHhcCCCcc-eeecccccCC------
Q 045577          263 LD-AEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELL--------QAWKLWSEGDPM-EIIDEQTKMK------  326 (392)
Q Consensus       263 l~-~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~--------~~~diws~G~v~-~~ld~~~~~~------  326 (392)
                      ++ -.|.+||+|||.++.+. .....+.+..||..||| ||+.        .+.||||+||.. ||..+++++.      
T Consensus       708 vNTySGvlKISDFGTsKRLA-ginP~TETFTGTLQYMA-PEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~Elgspq  785 (1226)
T KOG4279|consen  708 VNTYSGVLKISDFGTSKRLA-GINPCTETFTGTLQYMA-PEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFVELGSPQ  785 (1226)
T ss_pred             EeeccceEEecccccchhhc-cCCccccccccchhhhC-hHhhccCCcCCCchhhhhhccceeEeeccCCCCeeecCChh
Confidence            96 57889999999998764 22334556889999999 7765        478999999965 7777766542      


Q ss_pred             ------------CCCCHHHHHHHHHHHHhhcccCcCCCCCHHHHHHH
Q 045577          327 ------------GPFSADELVKCIEVGLLCVQQRIEDWPTMSSVLTM  361 (392)
Q Consensus       327 ------------~~~~~~~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~  361 (392)
                                  ++.+.+...++...+++|..++|.+||++.++++.
T Consensus       786 AAMFkVGmyKvHP~iPeelsaeak~FilrcFepd~~~R~sA~~LL~D  832 (1226)
T KOG4279|consen  786 AAMFKVGMYKVHPPIPEELSAEAKNFILRCFEPDPCDRPSAKDLLQD  832 (1226)
T ss_pred             HhhhhhcceecCCCCcHHHHHHHHHHHHHHcCCCcccCccHHHhccC
Confidence                        33455566678889999999999999999998865

>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]

Probab=99.84  E-value=1.9e-21  Score=180.45  Aligned_cols=157  Identities=26%  Similarity=0.374  Sum_probs=121.7

Q ss_pred             CCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEcCCCCCeEeeeeceE
Q 045577          199 GEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEINPNISDFGPAR  278 (392)
Q Consensus       199 ~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~~~~~~kl~DFGla~  278 (392)
                      .++|+|+|+|+ -|+......+.-+ ......-++.|+.+||.|+|+.   +|+|||+||+|++++.+...||+|||+|+
T Consensus        99 ~DvYiV~elMe-tDL~~iik~~~~L-~d~H~q~f~YQiLrgLKyiHSA---nViHRDLKPsNll~n~~c~lKI~DFGLAR  173 (359)
T KOG0660|consen   99 NDVYLVFELME-TDLHQIIKSQQDL-TDDHAQYFLYQILRGLKYIHSA---NVIHRDLKPSNLLLNADCDLKICDFGLAR  173 (359)
T ss_pred             ceeEEehhHHh-hHHHHHHHcCccc-cHHHHHHHHHHHHHhcchhhcc---cccccccchhheeeccCCCEEecccccee
Confidence            68999999996 3454433333222 3333566899999999999998   99999999999999999999999999999


Q ss_pred             EeCCC-CcceeceeeecccccCchhHH-------HHHHHhcCCCcc-eeecccccCCCCCCHHHHH--------------
Q 045577          279 IFGDQ-TEEVTGRVIGTQTLKTVPELL-------QAWKLWSEGDPM-EIIDEQTKMKGPFSADELV--------------  335 (392)
Q Consensus       279 ~~~~~-~~~~~~~~~gt~~y~a~~~~~-------~~~diws~G~v~-~~ld~~~~~~~~~~~~~~~--------------  335 (392)
                      ..... .....+..+.|..|.| ||+.       .+.|+||.||++ |++.+++.+++....+++.              
T Consensus       174 ~~~~~~~~~~mTeYVaTRWYRA-PElll~~~~Yt~aiDiWSvGCI~AEmL~gkplFpG~d~v~Ql~lI~~~lGtP~~e~l  252 (359)
T KOG0660|consen  174 YLDKFFEDGFMTEYVATRWYRA-PELLLNSSEYTKAIDIWSVGCILAEMLTGKPLFPGKDYVHQLQLILELLGTPSEEDL  252 (359)
T ss_pred             eccccCcccchhcceeeeeecC-HHHHhccccccchhhhhhhhHHHHHHHcCCCCCCCCchHHHHHHHHHhcCCCCHHHH
Confidence            87532 1223345778999999 7665       478999999988 7888888888776666555              


Q ss_pred             --------------------------------HHHHHHHhhcccCcCCCCCHHHHHHH
Q 045577          336 --------------------------------KCIEVGLLCVQQRIEDWPTMSSVLTM  361 (392)
Q Consensus       336 --------------------------------~~~~i~~~Cl~~dp~~RPsm~eVv~~  361 (392)
                                                      ..+++..+++..||.+|+|++|.++.
T Consensus       253 ~~i~s~~ar~yi~slp~~p~~~f~~~fp~a~p~AidLlekmL~fdP~kRita~eAL~h  310 (359)
T KOG0660|consen  253 QKIRSEKARPYIKSLPQIPKQPFSSIFPNANPLAIDLLEKMLVFDPKKRITAEEALAH  310 (359)
T ss_pred             HHhccHHHHHHHHhCCCCCCCCHHHHcCCCCHHHHHHHHHHhccCccccCCHHHHhcC
Confidence                                            23345568999999999999998764

>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10

Probab=99.84  E-value=3.2e-21  Score=179.97  Aligned_cols=177  Identities=18%  Similarity=0.171  Sum_probs=126.9

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEc
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLD  264 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~  264 (392)
                      |++.++.....+.++..+++|||++++++............+..++.++.|++.||.|||+.   +++||||||+||+++
T Consensus        65 h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~i~~al~~lH~~---~iiH~dikp~nili~  141 (266)
T cd05064          65 HSNIVRLEGVITRGNTMMIVTEYMSNGALDSFLRKHEGQLVAGQLMGMLPGLASGMKYLSEM---GYVHKGLAAHKVLVN  141 (266)
T ss_pred             CCCcCeEEEEEecCCCcEEEEEeCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHC---CEeeccccHhhEEEc
Confidence            45555554444456789999999999999775544333335556889999999999999998   899999999999999


Q ss_pred             CCCCCeEeeeeceEEeCCCCcceeceeeecccccCchhHH------HHHHHhcCCCcc-eeec-ccccCCCCC-------
Q 045577          265 AEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIID-EQTKMKGPF-------  329 (392)
Q Consensus       265 ~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld-~~~~~~~~~-------  329 (392)
                      .++.+|++|||.+...............++..|+| ||..      .+.|+|+.|+++ +++. +..++....       
T Consensus       142 ~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~a-PE~~~~~~~~~~~Di~slG~~l~ell~~g~~p~~~~~~~~~~~~  220 (266)
T cd05064         142 SDLVCKISGFRRLQEDKSEAIYTTMSGKSPVLWAA-PEAIQYHHFSSASDVWSFGIVMWEVMSYGERPYWDMSGQDVIKA  220 (266)
T ss_pred             CCCcEEECCCcccccccccchhcccCCCCceeecC-HHHHhhCCccchhHHHHHHHHHHHHhcCCCCCcCcCCHHHHHHH
Confidence            99999999999876532111111112234567888 6654      368999999876 3343 432322111       


Q ss_pred             ---------CHHHHHHHHHHHHhhcccCcCCCCCHHHHHHHHccC
Q 045577          330 ---------SADELVKCIEVGLLCVQQRIEDWPTMSSVLTMLSNE  365 (392)
Q Consensus       330 ---------~~~~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~L~~~  365 (392)
                               +......+.+++..||+.+|++||++.+|.+.|+..
T Consensus       221 ~~~~~~~~~~~~~~~~~~~li~~c~~~~p~~RP~~~~i~~~l~~~  265 (266)
T cd05064         221 VEDGFRLPAPRNCPNLLHQLMLDCWQKERGERPRFSQIHSILSKM  265 (266)
T ss_pred             HHCCCCCCCCCCCCHHHHHHHHHHcCCCchhCCCHHHHHHHHHhh
Confidence                     112234566788899999999999999999998753

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor

>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1

Probab=99.84  E-value=3.3e-21  Score=183.43  Aligned_cols=176  Identities=19%  Similarity=0.247  Sum_probs=122.5

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhc------------------cccchhhhhHHHHHHHhhhhcCcC
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFEC------------------SKYSSYVTNILYGIARVILYLPED  246 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~------------------~~~~~~~~~i~~~ia~gL~yLH~~  246 (392)
                      |++.++........+..+++|||++++++.........                  ......+.+++.|++.||.|||+.
T Consensus        78 h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~  157 (304)
T cd05096          78 DPNIIRLLGVCVDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSSL  157 (304)
T ss_pred             CCCeeEEEEEEecCCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHC
Confidence            44444444433334678999999999988764432211                  012234678999999999999998


Q ss_pred             CCCceeecccccceeEEcCCCCCeEeeeeceEEeCCCC-cceeceeeecccccCchhHH------HHHHHhcCCCcc-ee
Q 045577          247 SRLEIIHRDHKTSNVLLDAEINPNISDFGPARIFGDQT-EEVTGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EI  318 (392)
Q Consensus       247 ~~~~iiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~-~~~~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~  318 (392)
                         +|+||||||+||+++.++.+||+|||+++.+.... ........++..|+| ||..      .+.|+|+.|+++ ++
T Consensus       158 ---~ivH~dlkp~Nill~~~~~~kl~DfG~~~~~~~~~~~~~~~~~~~~~~y~a-PE~~~~~~~~~~~Dv~slG~~l~el  233 (304)
T cd05096         158 ---NFVHRDLATRNCLVGENLTIKIADFGMSRNLYAGDYYRIQGRAVLPIRWMA-WECILMGKFTTASDVWAFGVTLWEI  233 (304)
T ss_pred             ---CccccCcchhheEEcCCccEEECCCccceecccCceeEecCcCCCCccccC-HHHHhcCCCCchhhhHHHHHHHHHH
Confidence               89999999999999999999999999998654221 112223445778999 6654      368999999876 33


Q ss_pred             ec--ccccCCCCCC-----------------------HHHHHHHHHHHHhhcccCcCCCCCHHHHHHHHcc
Q 045577          319 ID--EQTKMKGPFS-----------------------ADELVKCIEVGLLCVQQRIEDWPTMSSVLTMLSN  364 (392)
Q Consensus       319 ld--~~~~~~~~~~-----------------------~~~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~L~~  364 (392)
                      +.  ...++.....                       ......+.+++.+|++.+|++||++.+|.+.|++
T Consensus       234 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~RPs~~~i~~~l~~  304 (304)
T cd05096         234 LMLCKEQPYGELTDEQVIENAGEFFRDQGRQVYLFRPPPCPQGLYELMLQCWSRDCRERPSFSDIHAFLTE  304 (304)
T ss_pred             HHccCCCCCCcCCHHHHHHHHHHHhhhccccccccCCCCCCHHHHHHHHHHccCCchhCcCHHHHHHHHhC
Confidence            32  1111111110                       1112356788899999999999999999999863

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k

>PTZ00267 NIMA-related protein kinase; Provisional

Probab=99.84  E-value=3.1e-21  Score=195.34  Aligned_cols=172  Identities=20%  Similarity=0.227  Sum_probs=127.0

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhh---ccccchhhhhHHHHHHHhhhhcCcCCCCceeeccccccee
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFE---CSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNV  261 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~---~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NI  261 (392)
                      |++.++.......++..|++|||++++++.....+..   .......+..++.|++.||.|||+.   +|+||||||+||
T Consensus       124 Hpniv~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~---~ivHrDlkp~NI  200 (478)
T PTZ00267        124 HFGIVKHFDDFKSDDKLLLIMEYGSGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHSR---KMMHRDLKSANI  200 (478)
T ss_pred             CCCEeEEEEEEEECCEEEEEEECCCCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhC---CEEECCcCHHhE
Confidence            6666666665555678999999999999976443221   1123444677899999999999998   899999999999


Q ss_pred             EEcCCCCCeEeeeeceEEeCCCCc-ceeceeeecccccCchhHH------HHHHHhcCCCcc-eeecccccCCCCCCH--
Q 045577          262 LLDAEINPNISDFGPARIFGDQTE-EVTGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIIDEQTKMKGPFSA--  331 (392)
Q Consensus       262 ll~~~~~~kl~DFGla~~~~~~~~-~~~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld~~~~~~~~~~~--  331 (392)
                      +++.++.+||+|||+++.+..... .......||+.|+| ||+.      .+.|+|+.|+++ +++.+..++......  
T Consensus       201 ll~~~~~~kL~DFgla~~~~~~~~~~~~~~~~gt~~y~a-PE~~~~~~~~~~~Dv~slG~~l~el~tg~~Pf~~~~~~~~  279 (478)
T PTZ00267        201 FLMPTGIIKLGDFGFSKQYSDSVSLDVASSFCGTPYYLA-PELWERKRYSKKADMWSLGVILYELLTLHRPFKGPSQREI  279 (478)
T ss_pred             EECCCCcEEEEeCcCceecCCccccccccccCCCccccC-HhHhCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHHH
Confidence            999999999999999987653221 22334579999999 7654      478999999876 555554333222111  


Q ss_pred             --------------HHHHHHHHHHHhhcccCcCCCCCHHHHHH
Q 045577          332 --------------DELVKCIEVGLLCVQQRIEDWPTMSSVLT  360 (392)
Q Consensus       332 --------------~~~~~~~~i~~~Cl~~dp~~RPsm~eVv~  360 (392)
                                    .....+.+++..|++.+|++||++.++++
T Consensus       280 ~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rps~~~~l~  322 (478)
T PTZ00267        280 MQQVLYGKYDPFPCPVSSGMKALLDPLLSKNPALRPTTQQLLH  322 (478)
T ss_pred             HHHHHhCCCCCCCccCCHHHHHHHHHHhccChhhCcCHHHHHh
Confidence                          11235667888999999999999998864

>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5

Probab=99.84  E-value=3.1e-21  Score=181.78  Aligned_cols=171  Identities=22%  Similarity=0.270  Sum_probs=124.0

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEc
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLD  264 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~  264 (392)
                      |+++++.......++..|++|||++++.+...... ........+..++.|++.||.|||+.   +++||||||+||+++
T Consensus        59 h~~iv~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~-~~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dlkp~Nill~  134 (287)
T cd07848          59 QENIVELKEAFRRRGKLYLVFEYVEKNMLELLEEM-PNGVPPEKVRSYIYQLIKAIHWCHKN---DIVHRDIKPENLLIS  134 (287)
T ss_pred             CccccchhhhEecCCEEEEEEecCCCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEc
Confidence            56666655555556779999999998766543221 11234445788999999999999998   899999999999999


Q ss_pred             CCCCCeEeeeeceEEeCCCCcceeceeeecccccCchhHH------HHHHHhcCCCcc-eeecccccCCCCCCHHH----
Q 045577          265 AEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIIDEQTKMKGPFSADE----  333 (392)
Q Consensus       265 ~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld~~~~~~~~~~~~~----  333 (392)
                      .++.+||+|||+++..............|++.|+| ||+.      .+.|+|+.|+++ +++.+++.+.+....+.    
T Consensus       135 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~a-PE~~~~~~~~~~~DiwslGvil~el~~g~~pf~~~~~~~~~~~~  213 (287)
T cd07848         135 HNDVLKLCDFGFARNLSEGSNANYTEYVATRWYRS-PELLLGAPYGKAVDMWSVGCILGELSDGQPLFPGESEIDQLFTI  213 (287)
T ss_pred             CCCcEEEeeccCcccccccccccccccccccccCC-cHHHcCCCCCCchhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHH
Confidence            99999999999998764322223334578999999 6655      357999999876 55555443332211110    


Q ss_pred             -------------------------------------------HHHHHHHHHhhcccCcCCCCCHHHHHH
Q 045577          334 -------------------------------------------LVKCIEVGLLCVQQRIEDWPTMSSVLT  360 (392)
Q Consensus       334 -------------------------------------------~~~~~~i~~~Cl~~dp~~RPsm~eVv~  360 (392)
                                                                 ...+.+++..|++.||++||+++++++
T Consensus       214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~~P~~R~s~~~~l~  283 (287)
T cd07848         214 QKVLGPLPAEQMKLFYSNPRFHGLRFPAVNHPQSLERRYLGILSGVLLDLMKNLLKLNPTDRYLTEQCLN  283 (287)
T ss_pred             HHhhCCCCHHHHHhhhccchhcccccCcccCcccHHHhhhcccCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence                                                       123667888999999999999998874

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes

>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

Probab=99.84  E-value=6.2e-21  Score=177.52  Aligned_cols=177  Identities=17%  Similarity=0.198  Sum_probs=128.5

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhh-hccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEE
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEF-ECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLL  263 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~-~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll  263 (392)
                      |+++++.....+.++..+++|||++++++....... ........++.++.|++.||.|||+.   +++||||||+||++
T Consensus        61 h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~---~i~H~dlkp~nil~  137 (263)
T cd05052          61 HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLV  137 (263)
T ss_pred             CCChhheEEEEcCCCCcEEEEEeCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CEeecccCcceEEE
Confidence            566666666555567789999999999887754332 22235555788999999999999998   89999999999999


Q ss_pred             cCCCCCeEeeeeceEEeCCCCcceeceeeecccccCchhHHH------HHHHhcCCCcc-eeec-ccccCCCCC------
Q 045577          264 DAEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELLQ------AWKLWSEGDPM-EIID-EQTKMKGPF------  329 (392)
Q Consensus       264 ~~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~~------~~diws~G~v~-~~ld-~~~~~~~~~------  329 (392)
                      +.++.+||+|||++...............++..|++ ||...      ..|+|++|+++ +++. +...+.+..      
T Consensus       138 ~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~y~a-PE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~~~~  216 (263)
T cd05052         138 GENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTA-PESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYE  216 (263)
T ss_pred             cCCCcEEeCCCccccccccceeeccCCCCCccccCC-HHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHH
Confidence            999999999999998754322211112234567998 76543      68999999876 4443 322322211      


Q ss_pred             ----------CHHHHHHHHHHHHhhcccCcCCCCCHHHHHHHHccC
Q 045577          330 ----------SADELVKCIEVGLLCVQQRIEDWPTMSSVLTMLSNE  365 (392)
Q Consensus       330 ----------~~~~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~L~~~  365 (392)
                                +......+.+++.+|++.+|++||++.+++++|+..
T Consensus       217 ~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~l~~~l~~~  262 (263)
T cd05052         217 LLEKGYRMERPEGCPPKVYELMRACWQWNPSDRPSFAEIHQAFETM  262 (263)
T ss_pred             HHHCCCCCCCCCCCCHHHHHHHHHHccCCcccCCCHHHHHHHHHhh
Confidence                      111123566788899999999999999999999764

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays

>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]

Probab=99.84  E-value=7.7e-22  Score=176.53  Aligned_cols=169  Identities=23%  Similarity=0.237  Sum_probs=126.6

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEc
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLD  264 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~  264 (392)
                      |+..+...+.-.++.-.|+|+|.|+.|.+++..-..-. ..+....+|+.|+..|++|||..   .|+||||||+|||++
T Consensus        82 HP~II~l~D~yes~sF~FlVFdl~prGELFDyLts~Vt-lSEK~tR~iMrqlfegVeylHa~---~IVHRDLKpENILld  157 (411)
T KOG0599|consen   82 HPYIIDLQDVYESDAFVFLVFDLMPRGELFDYLTSKVT-LSEKETRRIMRQLFEGVEYLHAR---NIVHRDLKPENILLD  157 (411)
T ss_pred             CCcEEEeeeeccCcchhhhhhhhcccchHHHHhhhhee-ecHHHHHHHHHHHHHHHHHHHHh---hhhhcccChhheeec
Confidence            66777666655555678999999999999876544332 23444688999999999999998   899999999999999


Q ss_pred             CCCCCeEeeeeceEEeCCCCcceeceeeecccccCchhHH------------HHHHHhcCCCcce---------------
Q 045577          265 AEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELL------------QAWKLWSEGDPME---------------  317 (392)
Q Consensus       265 ~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~------------~~~diws~G~v~~---------------  317 (392)
                      ++..+||+|||.++.+...  ......+||++|+| ||.+            ...|+|+.|.++.               
T Consensus       158 dn~~i~isDFGFa~~l~~G--ekLrelCGTPgYLA-PEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGcpPFwHRkQm  234 (411)
T KOG0599|consen  158 DNMNIKISDFGFACQLEPG--EKLRELCGTPGYLA-PETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGCPPFWHRKQM  234 (411)
T ss_pred             cccceEEeccceeeccCCc--hhHHHhcCCCcccC-hhheeeecccCCCCccchhhHHHHHHHHHHHHcCCCchhHHHHH
Confidence            9999999999999987532  23344799999999 6544            4679999998762               


Q ss_pred             -----eecccccCCCCCCHHHHHHHHHHHHhhcccCcCCCCCHHHHHH
Q 045577          318 -----IIDEQTKMKGPFSADELVKCIEVGLLCVQQRIEDWPTMSSVLT  360 (392)
Q Consensus       318 -----~ld~~~~~~~~~~~~~~~~~~~i~~~Cl~~dp~~RPsm~eVv~  360 (392)
                           ++.++..+..+.-.+......+++.+|++.||.+|-|..|+++
T Consensus       235 lMLR~ImeGkyqF~speWadis~~~KdLIsrlLqVdp~~Ritake~La  282 (411)
T KOG0599|consen  235 LMLRMIMEGKYQFRSPEWADISATVKDLISRLLQVDPTKRITAKEALA  282 (411)
T ss_pred             HHHHHHHhcccccCCcchhhccccHHHHHHHHHeeCchhcccHHHHhc
Confidence                 2222222222222233334556777999999999999999764

>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor

Probab=99.84  E-value=3.4e-21  Score=189.12  Aligned_cols=134  Identities=22%  Similarity=0.316  Sum_probs=99.5

Q ss_pred             hhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEcCCCCCeEeeeeceEEeCCCCc-ceeceeeecccccCchhHH--
Q 045577          228 YVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEINPNISDFGPARIFGDQTE-EVTGRVIGTQTLKTVPELL--  304 (392)
Q Consensus       228 ~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~~-~~~~~~~gt~~y~a~~~~~--  304 (392)
                      .+.+++.||+.||.|||+.   +|+||||||+||+++.++.+||+|||+++....... .......++..||| ||..  
T Consensus       213 ~~~~i~~qi~~aL~yLH~~---giiHrDLkp~Nil~~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~a-PE~~~~  288 (374)
T cd05106         213 DLLRFSSQVAQGMDFLASK---NCIHRDVAARNVLLTDGRVAKICDFGLARDIMNDSNYVVKGNARLPVKWMA-PESIFD  288 (374)
T ss_pred             HHHHHHHHHHHHHHHHHHC---CEEeccCchheEEEeCCCeEEEeeceeeeeccCCcceeeccCCCCccceeC-HHHhcC
Confidence            3678999999999999998   899999999999999999999999999986542211 11122334567999 7654  


Q ss_pred             ----HHHHHhcCCCcc-eeec-ccccCCCCCCHH-----------------HHHHHHHHHHhhcccCcCCCCCHHHHHHH
Q 045577          305 ----QAWKLWSEGDPM-EIID-EQTKMKGPFSAD-----------------ELVKCIEVGLLCVQQRIEDWPTMSSVLTM  361 (392)
Q Consensus       305 ----~~~diws~G~v~-~~ld-~~~~~~~~~~~~-----------------~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~  361 (392)
                          .+.|+|+.|+++ +++. +..++.......                 ....+.+++..|++.+|++||++.+|+++
T Consensus       289 ~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~~l~~~  368 (374)
T cd05106         289 CVYTVQSDVWSYGILLWEIFSLGKSPYPGILVNSKFYKMVKRGYQMSRPDFAPPEIYSIMKMCWNLEPTERPTFSQISQL  368 (374)
T ss_pred             CCCCccccHHHHHHHHHHHHhCCCCCCccccccHHHHHHHHcccCccCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence                367999999877 4443 433322111110                 12456678889999999999999999999


Q ss_pred             HccC
Q 045577          362 LSNE  365 (392)
Q Consensus       362 L~~~  365 (392)
                      |+..
T Consensus       369 l~~~  372 (374)
T cd05106         369 IQRQ  372 (374)
T ss_pred             HHHH
Confidence            9864

Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti

>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit

Probab=99.83  E-value=4.4e-21  Score=188.34  Aligned_cols=134  Identities=22%  Similarity=0.313  Sum_probs=98.9

Q ss_pred             hhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEcCCCCCeEeeeeceEEeCCCCcc-eeceeeecccccCchhHHH-
Q 045577          228 YVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEINPNISDFGPARIFGDQTEE-VTGRVIGTQTLKTVPELLQ-  305 (392)
Q Consensus       228 ~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~~~-~~~~~~gt~~y~a~~~~~~-  305 (392)
                      .+.+++.||++||.|||+.   +++||||||+||+++.++.+||+|||+++........ ......++..|+| ||... 
T Consensus       215 ~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y~a-PE~~~~  290 (375)
T cd05104         215 DLLSFSYQVAKGMSFLASK---NCIHRDLAARNILLTHGRITKICDFGLARDIRNDSNYVVKGNARLPVKWMA-PESIFN  290 (375)
T ss_pred             HHHHHHHHHHHHHHHHHHC---CeeccCCchhhEEEECCCcEEEecCccceeccCcccccccCCCCCCcceeC-hhHhcC
Confidence            3578899999999999998   8999999999999999999999999999876422211 1122334567999 77553 


Q ss_pred             -----HHHHhcCCCcc-eeec-ccccCCCCCCH-----------------HHHHHHHHHHHhhcccCcCCCCCHHHHHHH
Q 045577          306 -----AWKLWSEGDPM-EIID-EQTKMKGPFSA-----------------DELVKCIEVGLLCVQQRIEDWPTMSSVLTM  361 (392)
Q Consensus       306 -----~~diws~G~v~-~~ld-~~~~~~~~~~~-----------------~~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~  361 (392)
                           +.|+|++|+++ +++. +...+......                 .....+.+++..|++.||++||++.+|+++
T Consensus       291 ~~~~~~sDi~slG~~l~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~  370 (375)
T cd05104         291 CVYTFESDVWSYGILLWEIFSLGSSPYPGMPVDSKFYKMIKEGYRMLSPECAPSEMYDIMKSCWDADPLKRPTFKQIVQL  370 (375)
T ss_pred             CCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCchHHHHHHHHhCccCCCCCCCCHHHHHHHHHHccCChhHCcCHHHHHHH
Confidence                 57999999876 4443 32222111100                 112356688889999999999999999999


Q ss_pred             HccC
Q 045577          362 LSNE  365 (392)
Q Consensus       362 L~~~  365 (392)
                      |+..
T Consensus       371 l~~~  374 (375)
T cd05104         371 IEQQ  374 (375)
T ss_pred             HHhh
Confidence            9863

Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce

>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase

Probab=99.83  E-value=1e-20  Score=182.33  Aligned_cols=172  Identities=19%  Similarity=0.141  Sum_probs=124.7

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEc
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLD  264 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~  264 (392)
                      |++.++.......++..|++|||++++++.....+......+..+..++.|++.||.|||+.   +|+||||||+||+++
T Consensus        60 ~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~lH~~---~i~H~Dlkp~NIll~  136 (330)
T cd05601          60 SPWIPQLQYAFQDKDNLYLVMEYQPGGDLLSLLNRYEDQFDEDMAQFYLAELVLAIHSVHQM---GYVHRDIKPENVLID  136 (330)
T ss_pred             CCCCcceeeEEecCCeEEEEECCCCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEcccCchHheEEC
Confidence            34444433333345678999999999999876655433344555778899999999999998   899999999999999


Q ss_pred             CCCCCeEeeeeceEEeCCCCcceeceeeecccccCchhHHH------------HHHHhcCCCcc-eeecccccCCCCCCH
Q 045577          265 AEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELLQ------------AWKLWSEGDPM-EIIDEQTKMKGPFSA  331 (392)
Q Consensus       265 ~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~~------------~~diws~G~v~-~~ld~~~~~~~~~~~  331 (392)
                      .++.+||+|||++..+............||+.|+| ||+..            ..|+|+.|+++ +++.+..++......
T Consensus       137 ~~~~~kL~Dfg~a~~~~~~~~~~~~~~~gt~~y~a-PE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~  215 (330)
T cd05601         137 RTGHIKLADFGSAARLTANKMVNSKLPVGTPDYIA-PEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEGTSA  215 (330)
T ss_pred             CCCCEEeccCCCCeECCCCCceeeecccCCccccC-HHHhccccccccCCCCCcceeecccceeeeeccCCCCCCCCCHH
Confidence            99999999999998765333333333578999999 77653            57999999987 555554443222111


Q ss_pred             H-------------------HHHHHHHHHHhhcccCcCCCCCHHHHHHH
Q 045577          332 D-------------------ELVKCIEVGLLCVQQRIEDWPTMSSVLTM  361 (392)
Q Consensus       332 ~-------------------~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~  361 (392)
                      +                   ....+.+++..|++ +|++||++.++++.
T Consensus       216 ~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~ll~-~p~~R~t~~~l~~h  263 (330)
T cd05601         216 KTYNNIMNFQRFLKFPEDPKVSSDFLDLIQSLLC-GQKERLGYEGLCCH  263 (330)
T ss_pred             HHHHHHHcCCCccCCCCCCCCCHHHHHHHHHHcc-ChhhCCCHHHHhCC
Confidence            1                   12245566678887 99999999998853

Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor

>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.83  E-value=9.8e-21  Score=179.60  Aligned_cols=172  Identities=21%  Similarity=0.279  Sum_probs=124.9

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhccc-cchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEE
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSK-YSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLL  263 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~~-~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll  263 (392)
                      |++.+...-.+-.+..+++||.||.+|.+....+..-... .+..+..|+.++.+||.|||++   +.||||+|+.||||
T Consensus        83 HPNIv~~~~sFvv~~~LWvVmpfMa~GS~ldIik~~~~~Gl~E~~Ia~iLre~LkaL~YLH~~---G~IHRdvKAgnILi  159 (516)
T KOG0582|consen   83 HPNIVTYHCSFVVDSELWVVMPFMAGGSLLDIIKTYYPDGLEEASIATILREVLKALDYLHQN---GHIHRDVKAGNILI  159 (516)
T ss_pred             CCCcceEEEEEEecceeEEeehhhcCCcHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHhc---CceecccccccEEE
Confidence            6665555433334678999999999999988666543322 4444677899999999999999   99999999999999


Q ss_pred             cCCCCCeEeeeeceEEeCCCCc---ceeceeeecccccCchhHH--------HHHHHhcCCCcc-eeecccccCCC----
Q 045577          264 DAEINPNISDFGPARIFGDQTE---EVTGRVIGTQTLKTVPELL--------QAWKLWSEGDPM-EIIDEQTKMKG----  327 (392)
Q Consensus       264 ~~~~~~kl~DFGla~~~~~~~~---~~~~~~~gt~~y~a~~~~~--------~~~diws~G~v~-~~ld~~~~~~~----  327 (392)
                      +.+|.+||+|||.+..+.....   ......+||+.||| ||++        .+.|||+.|+.. |+..++.++..    
T Consensus       160 ~~dG~VkLadFgvsa~l~~~G~R~~~rf~tfvgtp~wmA-PEvl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~k~pPm  238 (516)
T KOG0582|consen  160 DSDGTVKLADFGVSASLFDSGDRQVTRFNTFVGTPCWMA-PEVLMQQLHGYDFKADIWSFGITACELAHGHAPFSKYPPM  238 (516)
T ss_pred             cCCCcEEEcCceeeeeecccCceeeEeeccccCcccccC-hHHhhhcccCccchhhhhhhhHHHHHHhcCCCCcccCChH
Confidence            9999999999998876652211   11145689999999 7773        378999999754 44444322211    


Q ss_pred             -----------------CCCHHHH----HHHHHHHHhhcccCcCCCCCHHHHHH
Q 045577          328 -----------------PFSADEL----VKCIEVGLLCVQQRIEDWPTMSSVLT  360 (392)
Q Consensus       328 -----------------~~~~~~~----~~~~~i~~~Cl~~dp~~RPsm~eVv~  360 (392)
                                       ..+.++.    ..+.+.+-.|++.||.+|||++++++
T Consensus       239 kvLl~tLqn~pp~~~t~~~~~d~~k~~~ksf~e~i~~CL~kDP~kRptAskLlk  292 (516)
T KOG0582|consen  239 KVLLLTLQNDPPTLLTSGLDKDEDKKFSKSFREMIALCLVKDPSKRPTASKLLK  292 (516)
T ss_pred             HHHHHHhcCCCCCcccccCChHHhhhhcHHHHHHHHHHhhcCcccCCCHHHHhc
Confidence                             1122221    13446677999999999999999875

>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

Probab=99.83  E-value=1.1e-20  Score=177.44  Aligned_cols=176  Identities=21%  Similarity=0.232  Sum_probs=125.1

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhh---------------ccccchhhhhHHHHHHHhhhhcCcCCCC
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFE---------------CSKYSSYVTNILYGIARVILYLPEDSRL  249 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~---------------~~~~~~~~~~i~~~ia~gL~yLH~~~~~  249 (392)
                      |++.++........+..+++|||++++++.....+..               .......+..++.|++.||.|||+.   
T Consensus        67 h~~i~~~~~~~~~~~~~~~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~~---  143 (283)
T cd05048          67 HPNIVCLLGVCTKEQPTCMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSSH---  143 (283)
T ss_pred             CcccceEEEEEcCCCceEEEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhC---
Confidence            3333333333334567899999999999877554421               1123344678999999999999998   


Q ss_pred             ceeecccccceeEEcCCCCCeEeeeeceEEeCCCC-cceeceeeecccccCchhHH------HHHHHhcCCCcc-eeec-
Q 045577          250 EIIHRDHKTSNVLLDAEINPNISDFGPARIFGDQT-EEVTGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIID-  320 (392)
Q Consensus       250 ~iiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~-~~~~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld-  320 (392)
                      +++|+||||+||+++.++.+||+|||+++...... ........+++.|+| ||..      .+.|+|++|+++ +++. 
T Consensus       144 ~i~H~dlkp~Nil~~~~~~~~L~dfg~~~~~~~~~~~~~~~~~~~~~~y~a-PE~~~~~~~~~~sDv~slG~il~el~~~  222 (283)
T cd05048         144 HFVHRDLAARNCLVGEGLTVKISDFGLSRDIYSADYYRVQSKSLLPVRWMP-PEAILYGKFTTESDIWSFGVVLWEIFSY  222 (283)
T ss_pred             CeeccccccceEEEcCCCcEEECCCcceeeccccccccccCCCcccccccC-HHHhccCcCchhhhHHHHHHHHHHHHcC
Confidence            89999999999999999999999999998654221 112223456788999 6654      468999999876 4443 


Q ss_pred             ccccCCCCC----------------CHHHHHHHHHHHHhhcccCcCCCCCHHHHHHHHcc
Q 045577          321 EQTKMKGPF----------------SADELVKCIEVGLLCVQQRIEDWPTMSSVLTMLSN  364 (392)
Q Consensus       321 ~~~~~~~~~----------------~~~~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~L~~  364 (392)
                      +..++.+..                +......+.+++..|++.+|++||++.+|++.|++
T Consensus       223 g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~i~~~l~~  282 (283)
T cd05048         223 GLQPYYGFSNQEVIEMIRSRQLLPCPEDCPARVYALMIECWNEIPARRPRFKDIHTRLRS  282 (283)
T ss_pred             CCCCCCCCCHHHHHHHHHcCCcCCCcccCCHHHHHHHHHHccCChhhCcCHHHHHHHHhc
Confidence            322222211                11223466788889999999999999999999975

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer

>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B

Probab=99.83  E-value=7.9e-21  Score=182.66  Aligned_cols=170  Identities=14%  Similarity=0.059  Sum_probs=122.5

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEc
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLD  264 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~  264 (392)
                      |++.++.......++..|++|||+.++++.....+.. ...+..+..++.||+.||.|||+.   +|+||||||+||+++
T Consensus        54 hp~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~L~~lH~~---~ivHrDlkp~NIll~  129 (323)
T cd05571          54 HPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRER-VFSEDRARFYGAEIVSALGYLHSC---DVVYRDLKLENLMLD  129 (323)
T ss_pred             CCCCCCEEEEEEcCCEEEEEEeCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHhC---CeEeCCCCHHHEEEC
Confidence            3343333333333567899999999999876554432 234555778899999999999998   899999999999999


Q ss_pred             CCCCCeEeeeeceEEeCCCCcceeceeeecccccCchhHH------HHHHHhcCCCcc-eeecccccCCCCCCH------
Q 045577          265 AEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIIDEQTKMKGPFSA------  331 (392)
Q Consensus       265 ~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld~~~~~~~~~~~------  331 (392)
                      .++.+||+|||+++..... ........||+.|+| ||+.      .+.|+|+.|+++ +++.+..++......      
T Consensus       130 ~~~~~kl~DfG~a~~~~~~-~~~~~~~~gt~~y~a-PE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~~  207 (323)
T cd05571         130 KDGHIKITDFGLCKEGISD-GATMKTFCGTPEYLA-PEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELI  207 (323)
T ss_pred             CCCCEEEeeCCCCcccccC-CCcccceecCccccC-hhhhcCCCCCccccCcccchhhhhhhcCCCCCCCCCHHHHHHHH
Confidence            9999999999998753211 112234679999999 7765      368999999977 566664444322111      


Q ss_pred             ---------HHHHHHHHHHHhhcccCcCCCC-----CHHHHHH
Q 045577          332 ---------DELVKCIEVGLLCVQQRIEDWP-----TMSSVLT  360 (392)
Q Consensus       332 ---------~~~~~~~~i~~~Cl~~dp~~RP-----sm~eVv~  360 (392)
                               .....+.+++..|++.||++||     ++.++++
T Consensus       208 ~~~~~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~  250 (323)
T cd05571         208 LMEEIRFPRTLSPEAKSLLAGLLKKDPKQRLGGGPEDAKEIME  250 (323)
T ss_pred             HcCCCCCCCCCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHHc
Confidence                     1122456678899999999999     7888764

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be

>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]

Probab=99.83  E-value=4.2e-21  Score=195.73  Aligned_cols=177  Identities=19%  Similarity=0.222  Sum_probs=127.2

Q ss_pred             CCCccccccC---cCC-C---CCeeEEecCccCCCcCh-hhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeeccc
Q 045577          185 SGGCKRNWEA---DCG-D---GEVFLMFEGIKLPDKSE-FTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDH  256 (392)
Q Consensus       185 s~GCvR~~~l---~C~-~---~~~~lv~e~~~~~~l~~-~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDl  256 (392)
                      |++||-..+.   .+. +   -++++.||||+++.+-+ +..+......+..+++|+.|+++|+.+||. +.++||||||
T Consensus        94 h~nIV~yidss~~~~~~~~~~~EvllLmEyC~gg~Lvd~mn~Rlq~~lte~eVLkIf~dv~~AVa~mH~-~~pPiIHRDL  172 (738)
T KOG1989|consen   94 HKNIVSYIDSSAINRSSNNGVWEVLLLMEYCKGGSLVDFMNTRLQTRLTEDEVLKIFYDVCEAVAAMHY-LKPPIIHRDL  172 (738)
T ss_pred             CCceeeEeccccccccCCCceeEEEeehhhccCCcHHHHHHHHHhccCChHHHHHHHHHHHHHHHHHhc-CCCccchhhh
Confidence            6666655542   121 1   26799999999766654 332323334566699999999999999999 6778999999


Q ss_pred             ccceeEEcCCCCCeEeeeeceEEeCCCC-cce-------eceeeecccccCchhHH---------HHHHHhcCCCcce--
Q 045577          257 KTSNVLLDAEINPNISDFGPARIFGDQT-EEV-------TGRVIGTQTLKTVPELL---------QAWKLWSEGDPME--  317 (392)
Q Consensus       257 Kp~NIll~~~~~~kl~DFGla~~~~~~~-~~~-------~~~~~gt~~y~a~~~~~---------~~~diws~G~v~~--  317 (392)
                      |.+||||..++..||||||-+....... ...       .-...-|+.|.+ ||..         ++.|||++||+++  
T Consensus       173 KiENvLls~~g~~KLCDFGSatt~~~~~~~~~e~~~ve~eI~k~TTp~YRs-PEMIDlysg~pI~eKsDIWALGclLYkL  251 (738)
T KOG1989|consen  173 KIENVLLSADGNYKLCDFGSATTKILSPTSAQEVNYVEEEIEKYTTPQYRS-PEMIDLYSGLPIGEKSDIWALGCLLYKL  251 (738)
T ss_pred             hhhheEEcCCCCEEeCcccccccccCCCccHHHHHHHHHHHHhhCCccccC-hHHHhhhcCCCCcchhHHHHHHHHHHHH
Confidence            9999999999999999999886432111 000       001346889999 6654         4889999999873  


Q ss_pred             --------------eecccccCCCCCCHHHHHHHHHHHHhhcccCcCCCCCHHHHHHHHccC
Q 045577          318 --------------IIDEQTKMKGPFSADELVKCIEVGLLCVQQRIEDWPTMSSVLTMLSNE  365 (392)
Q Consensus       318 --------------~ld~~~~~~~~~~~~~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~L~~~  365 (392)
                                    ++.+...++  .......++..++..||+++|++||++.+|+..+..+
T Consensus       252 Cy~t~PFe~sg~laIlng~Y~~P--~~p~ys~~l~~LI~~mL~~nP~~RPnI~Qv~~~~~~l  311 (738)
T KOG1989|consen  252 CYFTTPFEESGKLAILNGNYSFP--PFPNYSDRLKDLIRTMLQPNPDERPNIYQVLEEIFEL  311 (738)
T ss_pred             HHhCCCcCcCcceeEEeccccCC--CCccHHHHHHHHHHHHhccCcccCCCHHHHHHHHHHH
Confidence                          344422222  2245677788888899999999999999999887553

>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C

Probab=99.83  E-value=7.5e-21  Score=179.80  Aligned_cols=178  Identities=20%  Similarity=0.221  Sum_probs=128.2

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhc---------------cccchhhhhHHHHHHHhhhhcCcCCCC
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFEC---------------SKYSSYVTNILYGIARVILYLPEDSRL  249 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~---------------~~~~~~~~~i~~~ia~gL~yLH~~~~~  249 (392)
                      |++++........++..+++|||++++++.........               ......+++++.|++.||.|||++   
T Consensus        66 h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~---  142 (291)
T cd05094          66 HEHIVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQ---  142 (291)
T ss_pred             CCCcceEEEEEccCCceEEEEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHhC---
Confidence            44544444444445678999999999998775543221               123445788999999999999998   


Q ss_pred             ceeecccccceeEEcCCCCCeEeeeeceEEeCCCC-cceeceeeecccccCchhHH------HHHHHhcCCCcc-eeec-
Q 045577          250 EIIHRDHKTSNVLLDAEINPNISDFGPARIFGDQT-EEVTGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIID-  320 (392)
Q Consensus       250 ~iiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~-~~~~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld-  320 (392)
                      +++||||||+||+++.++.+||+|||+++...... ........++..|++ ||..      .+.|+|+.|+++ +++. 
T Consensus       143 ~i~H~dlkp~Nil~~~~~~~~l~dfg~a~~~~~~~~~~~~~~~~~~~~y~a-PE~~~~~~~~~~~Di~slG~il~el~t~  221 (291)
T cd05094         143 HFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMP-PESIMYRKFTTESDVWSFGVILWEIFTY  221 (291)
T ss_pred             CeeecccCcceEEEccCCcEEECCCCcccccCCCceeecCCCCCcceeecC-hHHhccCCCCchhhHHHHHHHHHHHHhC
Confidence            89999999999999999999999999997654211 111222446778999 7654      368999999876 4554 


Q ss_pred             ccccCCCCCC----------------HHHHHHHHHHHHhhcccCcCCCCCHHHHHHHHccCC
Q 045577          321 EQTKMKGPFS----------------ADELVKCIEVGLLCVQQRIEDWPTMSSVLTMLSNES  366 (392)
Q Consensus       321 ~~~~~~~~~~----------------~~~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~L~~~~  366 (392)
                      +..++.....                ......+.+++.+|++.+|++||++.+|+++|+...
T Consensus       222 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~v~~~l~~~~  283 (291)
T cd05094         222 GKQPWFQLSNTEVIECITQGRVLERPRVCPKEVYDIMLGCWQREPQQRLNIKEIYKILHALG  283 (291)
T ss_pred             CCCCCCCCCHHHHHHHHhCCCCCCCCccCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHH
Confidence            4333221111                112335677888999999999999999999998873

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n

>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha

Probab=99.83  E-value=1.3e-20  Score=181.16  Aligned_cols=171  Identities=14%  Similarity=0.061  Sum_probs=122.5

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCc-CCCCceeecccccceeEE
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPE-DSRLEIIHRDHKTSNVLL  263 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~-~~~~~iiHrDlKp~NIll  263 (392)
                      |++.++.......++..|+||||++++++.....+... ..+..+..++.|++.||.|||+ .   +|+||||||+||++
T Consensus        54 hp~i~~~~~~~~~~~~~~lv~E~~~~~~L~~~l~~~~~-l~~~~~~~~~~qi~~aL~~lH~~~---~ivHrDikp~NIll  129 (325)
T cd05594          54 HPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERV-FSEDRARFYGAEIVSALDYLHSEK---NVVYRDLKLENLML  129 (325)
T ss_pred             CCCCCceEEEEEcCCEEEEEEeCCCCCcHHHHHHhcCC-CCHHHHHHHHHHHHHHHHHHHhcC---CEEecCCCCCeEEE
Confidence            34444433333335678999999999998765544332 3444578899999999999997 5   89999999999999


Q ss_pred             cCCCCCeEeeeeceEEeCCCCcceeceeeecccccCchhHH------HHHHHhcCCCcc-eeecccccCCCCCCHH----
Q 045577          264 DAEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIIDEQTKMKGPFSAD----  332 (392)
Q Consensus       264 ~~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld~~~~~~~~~~~~----  332 (392)
                      +.++.+||+|||+++...... .......||+.|+| ||+.      .+.|+|+.|+++ +++.+..++.+....+    
T Consensus       130 ~~~~~~kL~Dfg~~~~~~~~~-~~~~~~~gt~~y~a-PE~~~~~~~~~~~DiwslG~il~el~tG~~Pf~~~~~~~~~~~  207 (325)
T cd05594         130 DKDGHIKITDFGLCKEGIKDG-ATMKTFCGTPEYLA-PEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFEL  207 (325)
T ss_pred             CCCCCEEEecCCCCeecCCCC-cccccccCCcccCC-HHHHccCCCCCccccccccceeeeeccCCCCCCCCCHHHHHHH
Confidence            999999999999987643211 12233579999999 7765      367999999987 5666544443322111    


Q ss_pred             -----------HHHHHHHHHHhhcccCcCCCC-----CHHHHHHH
Q 045577          333 -----------ELVKCIEVGLLCVQQRIEDWP-----TMSSVLTM  361 (392)
Q Consensus       333 -----------~~~~~~~i~~~Cl~~dp~~RP-----sm~eVv~~  361 (392)
                                 ....+.+++..|++.||++|+     ++.++++.
T Consensus       208 i~~~~~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h  252 (325)
T cd05594         208 ILMEEIRFPRTLSPEAKSLLSGLLKKDPKQRLGGGPDDAKEIMQH  252 (325)
T ss_pred             HhcCCCCCCCCCCHHHHHHHHHHhhcCHHHhCCCCCCCHHHHhcC
Confidence                       112455677899999999996     88888753

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien

>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.83  E-value=4.9e-21  Score=190.21  Aligned_cols=151  Identities=21%  Similarity=0.245  Sum_probs=117.9

Q ss_pred             CCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEcCCCCCeEeeeece
Q 045577          198 DGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEINPNISDFGPA  277 (392)
Q Consensus       198 ~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~~~~~~kl~DFGla  277 (392)
                      ...+|.||||+.+||+...+ +..+ ..+..+..++..|+.||+|||++   +||+||||.+|||||.+|++||+|||++
T Consensus       441 ~~~l~fvmey~~Ggdm~~~~-~~~~-F~e~rarfyaAev~l~L~fLH~~---~IIYRDlKLdNiLLD~eGh~kiADFGlc  515 (694)
T KOG0694|consen  441 KEHLFFVMEYVAGGDLMHHI-HTDV-FSEPRARFYAAEVVLGLQFLHEN---GIIYRDLKLDNLLLDTEGHVKIADFGLC  515 (694)
T ss_pred             CCeEEEEEEecCCCcEEEEE-eccc-ccHHHHHHHHHHHHHHHHHHHhc---CceeeecchhheEEcccCcEEecccccc
Confidence            57899999999999943322 2122 23333677899999999999999   9999999999999999999999999999


Q ss_pred             EEeCCCCcceeceeeecccccCchhHH------HHHHHhcCCCcc-eeecccccCCCCCCHHHHH---------------
Q 045577          278 RIFGDQTEEVTGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIIDEQTKMKGPFSADELV---------------  335 (392)
Q Consensus       278 ~~~~~~~~~~~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld~~~~~~~~~~~~~~~---------------  335 (392)
                      +.-- .....+.+.+||+.||| ||++      .++|.|++|+++ +|+-++.++.++...+...               
T Consensus       516 Ke~m-~~g~~TsTfCGTpey~a-PEil~e~~Yt~aVDWW~lGVLlyeML~Gq~PF~gddEee~FdsI~~d~~~yP~~ls~  593 (694)
T KOG0694|consen  516 KEGM-GQGDRTSTFCGTPEFLA-PEVLTEQSYTRAVDWWGLGVLLYEMLVGESPFPGDDEEEVFDSIVNDEVRYPRFLSK  593 (694)
T ss_pred             cccC-CCCCccccccCChhhcC-hhhhccCcccchhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHhcCCCCCCCcccH
Confidence            8632 23346677999999999 7766      488999999987 6777877777664433322               


Q ss_pred             HHHHHHHhhcccCcCCCCCH
Q 045577          336 KCIEVGLLCVQQRIEDWPTM  355 (392)
Q Consensus       336 ~~~~i~~~Cl~~dp~~RPsm  355 (392)
                      +.+.|+.+.+..+|++|-.+
T Consensus       594 ea~~il~~ll~k~p~kRLG~  613 (694)
T KOG0694|consen  594 EAIAIMRRLLRKNPEKRLGS  613 (694)
T ss_pred             HHHHHHHHHhccCcccccCC
Confidence            45567778888888888765

>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase

Probab=99.83  E-value=9.4e-21  Score=175.48  Aligned_cols=164  Identities=18%  Similarity=0.249  Sum_probs=119.5

Q ss_pred             CCCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEcCCCCCeEeeee
Q 045577          196 CGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEINPNISDFG  275 (392)
Q Consensus       196 C~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~~~~~~kl~DFG  275 (392)
                      ...+..+++|||++++++...............+..++.|++.||.|||+.   +++||||||+||+++.++.+||+|||
T Consensus        69 ~~~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~ni~i~~~~~~kl~d~g  145 (256)
T cd05114          69 TQQKPLYIVTEFMENGCLLNYLRQRQGKLSKDMLLSMCQDVCEGMEYLERN---SFIHRDLAARNCLVSSTGVVKVSDFG  145 (256)
T ss_pred             ccCCCEEEEEEcCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHC---CccccccCcceEEEcCCCeEEECCCC
Confidence            335678999999999998775544333334555788999999999999998   89999999999999999999999999


Q ss_pred             ceEEeCCCCcceeceeeecccccCchhHH------HHHHHhcCCCcc-eeec-ccccCCCCCCHH---------------
Q 045577          276 PARIFGDQTEEVTGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIID-EQTKMKGPFSAD---------------  332 (392)
Q Consensus       276 la~~~~~~~~~~~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld-~~~~~~~~~~~~---------------  332 (392)
                      +++..............++..|+| ||..      ...|+|+.|+++ +++. ++..+......+               
T Consensus       146 ~~~~~~~~~~~~~~~~~~~~~y~a-PE~~~~~~~~~~~Di~s~G~~l~el~~~g~~p~~~~~~~~~~~~i~~~~~~~~~~  224 (256)
T cd05114         146 MTRYVLDDEYTSSSGAKFPVKWSP-PEVFNFSKYSSKSDVWSFGVLMWEVFTEGKMPFEKKSNYEVVEMISRGFRLYRPK  224 (256)
T ss_pred             CccccCCCceeccCCCCCchhhCC-hhhcccCccchhhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCCCCCCCCC
Confidence            987654222111122234567888 6653      478999999876 4444 332332221111               


Q ss_pred             -HHHHHHHHHHhhcccCcCCCCCHHHHHHHHc
Q 045577          333 -ELVKCIEVGLLCVQQRIEDWPTMSSVLTMLS  363 (392)
Q Consensus       333 -~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~L~  363 (392)
                       ....+.+++.+|++.+|++||++.++++.|.
T Consensus       225 ~~~~~~~~li~~c~~~~p~~Rps~~~l~~~l~  256 (256)
T cd05114         225 LASMTVYEVMYSCWHEKPEGRPTFAELLRAIT  256 (256)
T ss_pred             CCCHHHHHHHHHHccCCcccCcCHHHHHHhhC
Confidence             1224677888999999999999999999874

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h

>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3

Probab=99.83  E-value=8e-21  Score=178.58  Aligned_cols=164  Identities=18%  Similarity=0.203  Sum_probs=122.4

Q ss_pred             CCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEcCCCCCeEeeeece
Q 045577          198 DGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEINPNISDFGPA  277 (392)
Q Consensus       198 ~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~~~~~~kl~DFGla  277 (392)
                      +...++++||+.++++............+..+..++.|++.||.|||+.   +++||||||+||+++.++.+||+|||++
T Consensus        80 ~~~~~~i~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~iiH~dlkp~nili~~~~~~kl~Dfg~~  156 (279)
T cd05111          80 GASLQLVTQLSPLGSLLDHVRQHRDSLDPQRLLNWCVQIAKGMYYLEEH---RMVHRNLAARNILLKSDSIVQIADFGVA  156 (279)
T ss_pred             CCccEEEEEeCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHC---CEeccccCcceEEEcCCCcEEEcCCccc
Confidence            4567899999999999876655443345556788999999999999998   8999999999999999999999999999


Q ss_pred             EEeCCCC-cceeceeeecccccCchhHH------HHHHHhcCCCcc-eeec-ccccCCCCCCHH----------------
Q 045577          278 RIFGDQT-EEVTGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIID-EQTKMKGPFSAD----------------  332 (392)
Q Consensus       278 ~~~~~~~-~~~~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld-~~~~~~~~~~~~----------------  332 (392)
                      +...... ........++..|++ ||..      .+.|+|+.|+++ +++. +..++.+....+                
T Consensus       157 ~~~~~~~~~~~~~~~~~~~~y~~-pE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~  235 (279)
T cd05111         157 DLLYPDDKKYFYSEHKTPIKWMA-LESILFGRYTHQSDVWSYGVTVWEMMSYGAEPYAGMRPHEVPDLLEKGERLAQPQI  235 (279)
T ss_pred             eeccCCCcccccCCCCCcccccC-HHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCCCcCCCCCC
Confidence            8764222 122233456778999 6654      367999999876 4544 432222211111                


Q ss_pred             HHHHHHHHHHhhcccCcCCCCCHHHHHHHHccC
Q 045577          333 ELVKCIEVGLLCVQQRIEDWPTMSSVLTMLSNE  365 (392)
Q Consensus       333 ~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~L~~~  365 (392)
                      ....+.+++..|++.+|++||++.++++.|...
T Consensus       236 ~~~~~~~li~~c~~~~p~~Rps~~el~~~l~~~  268 (279)
T cd05111         236 CTIDVYMVMVKCWMIDENVRPTFKELANEFTRM  268 (279)
T ss_pred             CCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHH
Confidence            122455678899999999999999999999875

Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r

>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2

Probab=99.83  E-value=5.5e-21  Score=184.31  Aligned_cols=159  Identities=19%  Similarity=0.179  Sum_probs=118.2

Q ss_pred             CCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEcCCCCCeEeeeec
Q 045577          197 GDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEINPNISDFGP  276 (392)
Q Consensus       197 ~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~~~~~~kl~DFGl  276 (392)
                      .++..|++|||++++++.....+... .....+..++.|++.||.|||+.   +|+||||||+|||++.++.+||+|||+
T Consensus        76 ~~~~~~lv~e~~~~g~L~~~l~~~~~-~~~~~~~~~~~qi~~~l~~lH~~---~ivHrDlkp~Nili~~~~~~kl~DfG~  151 (332)
T cd05614          76 TEAKLHLILDYVSGGEMFTHLYQRDN-FSEDEVRFYSGEIILALEHLHKL---GIVYRDIKLENILLDSEGHVVLTDFGL  151 (332)
T ss_pred             cCCEEEEEEeCCCCCcHHHHHHHcCC-CCHHHHHHHHHHHHHHHHHHHHC---CcEecCCCHHHeEECCCCCEEEeeCcC
Confidence            34668999999999998776554433 34445788999999999999998   899999999999999999999999999


Q ss_pred             eEEeCCCCcceeceeeecccccCchhHHH-------HHHHhcCCCcc-eeecccccCCCC---CCHHH------------
Q 045577          277 ARIFGDQTEEVTGRVIGTQTLKTVPELLQ-------AWKLWSEGDPM-EIIDEQTKMKGP---FSADE------------  333 (392)
Q Consensus       277 a~~~~~~~~~~~~~~~gt~~y~a~~~~~~-------~~diws~G~v~-~~ld~~~~~~~~---~~~~~------------  333 (392)
                      ++.+............||..|+| ||...       +.|+|+.|+++ +++.+...+...   .....            
T Consensus       152 ~~~~~~~~~~~~~~~~gt~~y~a-PE~~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~  230 (332)
T cd05614         152 SKEFLSEEKERTYSFCGTIEYMA-PEIIRGKGGHGKAVDWWSLGILIFELLTGASPFTLEGERNTQSEVSRRILKCDPPF  230 (332)
T ss_pred             CccccccCCCccccccCCccccC-HHHhcCCCCCCCccccccchhhhhhhhcCCCCCCCCCCCCCHHHHHHHHhcCCCCC
Confidence            98654322223334679999999 77642       57999999987 566654443211   11111            


Q ss_pred             ----HHHHHHHHHhhcccCcCCCC-----CHHHHHH
Q 045577          334 ----LVKCIEVGLLCVQQRIEDWP-----TMSSVLT  360 (392)
Q Consensus       334 ----~~~~~~i~~~Cl~~dp~~RP-----sm~eVv~  360 (392)
                          ...+.+++..|++.||++||     ++.++++
T Consensus       231 ~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~  266 (332)
T cd05614         231 PSFIGPEAQDLLHKLLRKDPKKRLGAGPQGASEIKE  266 (332)
T ss_pred             CCCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHHc
Confidence                12345778899999999999     6667764

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6

Probab=99.83  E-value=8.5e-21  Score=179.05  Aligned_cols=156  Identities=24%  Similarity=0.377  Sum_probs=113.8

Q ss_pred             CCCeeEEecCccCCCcChhhhh-hhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEcCCCCCeEeeeec
Q 045577          198 DGEVFLMFEGIKLPDKSEFTCE-FECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEINPNISDFGP  276 (392)
Q Consensus       198 ~~~~~lv~e~~~~~~l~~~~~~-~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~~~~~~kl~DFGl  276 (392)
                      ++..+++|||+.+ ++...... .........+..++.|++.||.|||+.   +|+||||||+||+++.++.+||+|||+
T Consensus        81 ~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~---~iiH~dlkp~Nil~~~~~~~kl~Dfg~  156 (290)
T cd07862          81 ETKLTLVFEHVDQ-DLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGL  156 (290)
T ss_pred             CCcEEEEEccCCC-CHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEEcCCCCEEEccccc
Confidence            3568999999974 55443322 122234555788999999999999998   899999999999999999999999999


Q ss_pred             eEEeCCCCcceeceeeecccccCchhHH------HHHHHhcCCCcc-eeecccccCCCCCCHHHH---------------
Q 045577          277 ARIFGDQTEEVTGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIIDEQTKMKGPFSADEL---------------  334 (392)
Q Consensus       277 a~~~~~~~~~~~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld~~~~~~~~~~~~~~---------------  334 (392)
                      ++.....  .......|++.|+| ||..      ...|+|+.|+++ +++.+.+.+.+..+.+.+               
T Consensus       157 ~~~~~~~--~~~~~~~~~~~y~a-PE~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~i~~~~~~~~~~~~  233 (290)
T cd07862         157 ARIYSFQ--MALTSVVVTLWYRA-PEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDW  233 (290)
T ss_pred             eEeccCC--cccccccccccccC-hHHHhCCCCCCccchHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhc
Confidence            9876432  22334568999999 7654      257999999876 455544433322211111               


Q ss_pred             ---------------------------HHHHHHHHhhcccCcCCCCCHHHHHH
Q 045577          335 ---------------------------VKCIEVGLLCVQQRIEDWPTMSSVLT  360 (392)
Q Consensus       335 ---------------------------~~~~~i~~~Cl~~dp~~RPsm~eVv~  360 (392)
                                                 ..+.+++.+|++.+|++||++.++++
T Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~  286 (290)
T cd07862         234 PRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALS  286 (290)
T ss_pred             hhhhcccchhccCCCCCCHHHHccCCCHHHHHHHHHHhccCchhcCCHHHHhc
Confidence                                       13356788999999999999999874

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla

>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases

Probab=99.83  E-value=4.9e-21  Score=183.15  Aligned_cols=172  Identities=15%  Similarity=0.066  Sum_probs=123.0

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEc
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLD  264 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~  264 (392)
                      |++.++........+..|++|||++++++.....+.... ....+..++.|++.||.|||+.   +|+||||||+||+++
T Consensus        52 h~~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~-~~~~~~~~~~qi~~~l~~lH~~---~i~HrDlkp~Nili~  127 (312)
T cd05585          52 CPFIVPLKFSFQSPEKLYLVLAFINGGELFHHLQREGRF-DLSRARFYTAELLCALENLHKF---NVIYRDLKPENILLD  127 (312)
T ss_pred             CCcEeceeeEEecCCeEEEEEcCCCCCcHHHHHHhcCCC-CHHHHHHHHHHHHHHHHHHHhC---CeEeCCCCHHHeEEC
Confidence            445554433333356789999999999997766554333 3444788999999999999998   899999999999999


Q ss_pred             CCCCCeEeeeeceEEeCCCCcceeceeeecccccCchhHH------HHHHHhcCCCcc-eeecccccCCCCCCHH-----
Q 045577          265 AEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIIDEQTKMKGPFSAD-----  332 (392)
Q Consensus       265 ~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld~~~~~~~~~~~~-----  332 (392)
                      .++.+||+|||+++...... .......||+.|+| ||..      .+.|+|+.|+++ +++.+..++.+....+     
T Consensus       128 ~~~~~kl~Dfg~~~~~~~~~-~~~~~~~gt~~y~a-PE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~~~~~~~~~  205 (312)
T cd05585         128 YQGHIALCDFGLCKLNMKDD-DKTNTFCGTPEYLA-PELLLGHGYTKAVDWWTLGVLLYEMLTGLPPFYDENVNEMYRKI  205 (312)
T ss_pred             CCCcEEEEECcccccCccCC-CccccccCCcccCC-HHHHcCCCCCCccceechhHHHHHHHhCCCCcCCCCHHHHHHHH
Confidence            99999999999987543211 22334679999999 7765      357999999877 5666644443321111     


Q ss_pred             ----------HHHHHHHHHHhhcccCcCCCCCHHHHHHHH
Q 045577          333 ----------ELVKCIEVGLLCVQQRIEDWPTMSSVLTML  362 (392)
Q Consensus       333 ----------~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~L  362 (392)
                                ....+.+++..|++.||++||+..++.+.|
T Consensus       206 ~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~~~~~~~e~l  245 (312)
T cd05585         206 LQEPLRFPDGFDRDAKDLLIGLLSRDPTRRLGYNGAQEIK  245 (312)
T ss_pred             HcCCCCCCCcCCHHHHHHHHHHcCCCHHHcCCCCCHHHHH
Confidence                      112455678899999999998654443333

Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl

>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]

Probab=99.82  E-value=2e-21  Score=188.61  Aligned_cols=174  Identities=21%  Similarity=0.216  Sum_probs=127.5

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEc
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLD  264 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~  264 (392)
                      |++.+.-....-...-.+++||||..|.|........... ......+..+||.|+.|||.+   +|||||||+-||||.
T Consensus       171 H~NII~FkGVCtqsPcyCIiMEfCa~GqL~~VLka~~~it-p~llv~Wsk~IA~GM~YLH~h---KIIHRDLKSPNiLIs  246 (904)
T KOG4721|consen  171 HPNIITFKGVCTQSPCYCIIMEFCAQGQLYEVLKAGRPIT-PSLLVDWSKGIAGGMNYLHLH---KIIHRDLKSPNILIS  246 (904)
T ss_pred             CcceeeEeeeecCCceeEEeeeccccccHHHHHhccCccC-HHHHHHHHHHhhhhhHHHHHh---hHhhhccCCCceEee
Confidence            5666544443323455889999999998876554433333 333688999999999999998   899999999999999


Q ss_pred             CCCCCeEeeeeceEEeCCCCcceeceeeecccccCchhHH------HHHHHhcCCCcc-eeecccccCC-----------
Q 045577          265 AEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIIDEQTKMK-----------  326 (392)
Q Consensus       265 ~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld~~~~~~-----------  326 (392)
                      .+..+||+|||.++...+. +. ...++||..||| ||++      +++|+|++|+++ |++.+..+..           
T Consensus       247 ~~d~VKIsDFGTS~e~~~~-ST-kMSFaGTVaWMA-PEvIrnePcsEKVDIwSfGVVLWEmLT~EiPYkdVdssAIIwGV  323 (904)
T KOG4721|consen  247 YDDVVKISDFGTSKELSDK-ST-KMSFAGTVAWMA-PEVIRNEPCSEKVDIWSFGVVLWEMLTGEIPYKDVDSSAIIWGV  323 (904)
T ss_pred             ccceEEeccccchHhhhhh-hh-hhhhhhhHhhhC-HHHhhcCCcccccceehhHHHHHHHHhcCCCccccchheeEEec
Confidence            9999999999999865432 11 123789999999 7776      478999999987 5554422211           


Q ss_pred             ------CCCCHHHHHHHHHHHHhhcccCcCCCCCHHHHHHHHccC
Q 045577          327 ------GPFSADELVKCIEVGLLCVQQRIEDWPTMSSVLTMLSNE  365 (392)
Q Consensus       327 ------~~~~~~~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~L~~~  365 (392)
                            -+.+..+..-+.-++..||+..|..||++++|+..|+-.
T Consensus       324 GsNsL~LpvPstcP~GfklL~Kqcw~sKpRNRPSFrqil~HldIa  368 (904)
T KOG4721|consen  324 GSNSLHLPVPSTCPDGFKLLLKQCWNSKPRNRPSFRQILLHLDIA  368 (904)
T ss_pred             cCCcccccCcccCchHHHHHHHHHHhcCCCCCccHHHHHHHHhhc
Confidence                  112223333444455699999999999999999999754

>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn

Probab=99.82  E-value=2.1e-20  Score=173.57  Aligned_cols=164  Identities=20%  Similarity=0.295  Sum_probs=120.9

Q ss_pred             CCCCeeEEecCccCCCcChhhhhhh-ccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEcCCCCCeEeeee
Q 045577          197 GDGEVFLMFEGIKLPDKSEFTCEFE-CSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEINPNISDFG  275 (392)
Q Consensus       197 ~~~~~~lv~e~~~~~~l~~~~~~~~-~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~~~~~~kl~DFG  275 (392)
                      ..+..+++|||++++++.....+.. .......+..++.|++.||.|||+.   +++||||||+||+++.++.+||+|||
T Consensus        72 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~LH~~---~i~H~dl~p~nili~~~~~~~l~dfg  148 (261)
T cd05072          72 KEEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERK---NYIHRDLRAANVLVSESLMCKIADFG  148 (261)
T ss_pred             CCCCcEEEEecCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccchhhEEecCCCcEEECCCc
Confidence            3466899999999999877554322 2224445688999999999999998   89999999999999999999999999


Q ss_pred             ceEEeCCCCcceeceeeecccccCchhHH------HHHHHhcCCCcc-eeec-ccccCCCCCCH----------------
Q 045577          276 PARIFGDQTEEVTGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIID-EQTKMKGPFSA----------------  331 (392)
Q Consensus       276 la~~~~~~~~~~~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld-~~~~~~~~~~~----------------  331 (392)
                      ++...............++..|+| ||..      ...|+|+.|+++ +++. +..++......                
T Consensus       149 ~~~~~~~~~~~~~~~~~~~~~y~a-PE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~  227 (261)
T cd05072         149 LARVIEDNEYTAREGAKFPIKWTA-PEAINFGSFTIKSDVWSFGILLYEIVTYGKIPYPGMSNSDVMSALQRGYRMPRME  227 (261)
T ss_pred             cceecCCCceeccCCCccceecCC-HHHhccCCCChhhhhhhhHHHHHHHHccCCCCCCCCCHHHHHHHHHcCCCCCCCC
Confidence            998765322222222345667999 6654      368999999876 4554 43333221111                


Q ss_pred             HHHHHHHHHHHhhcccCcCCCCCHHHHHHHHcc
Q 045577          332 DELVKCIEVGLLCVQQRIEDWPTMSSVLTMLSN  364 (392)
Q Consensus       332 ~~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~L~~  364 (392)
                      .....+.+++.+|++.+|++||+++++.+.|+.
T Consensus       228 ~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~  260 (261)
T cd05072         228 NCPDELYDIMKTCWKEKAEERPTFDYLQSVLDD  260 (261)
T ss_pred             CCCHHHHHHHHHHccCCcccCcCHHHHHHHHhc
Confidence            112466778889999999999999999999975

Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa

>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome

Probab=99.82  E-value=2.4e-20  Score=172.99  Aligned_cols=175  Identities=18%  Similarity=0.209  Sum_probs=123.5

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEc
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLD  264 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~  264 (392)
                      |++.++.....+.....+++|||+.++++............+..+++++.|++.||.|||+.   +++|+||||+||+++
T Consensus        58 h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~nili~  134 (256)
T cd05113          58 HEKLVQLYGVCTKQRPIYIVTEYMSNGCLLNYLREHGKRFQPSQLLEMCKDVCEGMAYLESK---QFIHRDLAARNCLVD  134 (256)
T ss_pred             CCCeeeEEEEEccCCCcEEEEEcCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccccCcceEEEc
Confidence            33333333333344568999999999988776544333345566899999999999999998   899999999999999


Q ss_pred             CCCCCeEeeeeceEEeCCCCcceeceeeecccccCchhHH------HHHHHhcCCCcc-eeec-ccccCCCCCCH-----
Q 045577          265 AEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIID-EQTKMKGPFSA-----  331 (392)
Q Consensus       265 ~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld-~~~~~~~~~~~-----  331 (392)
                      .++.+||+|||+++..............++..|++ ||..      ...|+|++|+++ +++. +..++......     
T Consensus       135 ~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~y~~-pe~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~~~~~  213 (256)
T cd05113         135 DQGCVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSP-PEVLLYSKFSSKSDVWAFGVLMWEVYSLGKMPYERFNNSETVEK  213 (256)
T ss_pred             CCCCEEECCCccceecCCCceeecCCCccChhhCC-HHHHhcCcccchhHHHHHHHHHHHHhcCCCCCcCcCCHHHHHHH
Confidence            99999999999988654322111111234567888 6654      368999999876 4443 32222111111     


Q ss_pred             -----------HHHHHHHHHHHhhcccCcCCCCCHHHHHHHHc
Q 045577          332 -----------DELVKCIEVGLLCVQQRIEDWPTMSSVLTMLS  363 (392)
Q Consensus       332 -----------~~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~L~  363 (392)
                                 .....+.+++.+|++.+|++||++.++++.|+
T Consensus       214 ~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~ll~~~~  256 (256)
T cd05113         214 VSQGLRLYRPHLASEKVYAIMYSCWHEKAEERPTFQQLLSSIE  256 (256)
T ss_pred             HhcCCCCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHhhC
Confidence                       11235677888999999999999999998874

Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds

>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]

Probab=99.82  E-value=9.3e-21  Score=192.58  Aligned_cols=178  Identities=20%  Similarity=0.194  Sum_probs=134.6

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhh----cc---------ccchhhhhHHHHHHHhhhhcCcCCCCce
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFE----CS---------KYSSYVTNILYGIARVILYLPEDSRLEI  251 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~----~~---------~~~~~~~~i~~~ia~gL~yLH~~~~~~i  251 (392)
                      |+|.||...+.-++...++|+|||..|||.++.....    +.         +...+++.|+.|||.||.||-++   ..
T Consensus       548 H~nIVrLlGVC~~~~P~~MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~~---~F  624 (774)
T KOG1026|consen  548 HPNIVRLLGVCREGDPLCMVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSSH---HF  624 (774)
T ss_pred             CCCeEEEEEEEccCCeeEEEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhC---cc
Confidence            9999999998777778999999999999988543321    11         23345799999999999999777   79


Q ss_pred             eecccccceeEEcCCCCCeEeeeeceEEeCCCCcc-eeceeeecccccCchhHH-----HHHHHhcCCCcc-eeeccccc
Q 045577          252 IHRDHKTSNVLLDAEINPNISDFGPARIFGDQTEE-VTGRVIGTQTLKTVPELL-----QAWKLWSEGDPM-EIIDEQTK  324 (392)
Q Consensus       252 iHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~~~-~~~~~~gt~~y~a~~~~~-----~~~diws~G~v~-~~ld~~~~  324 (392)
                      +||||..+|+|+.++..+||+||||++......-. ...+..-...||+++-+.     ...|+|+.|+++ |++.....
T Consensus       625 VHRDLATRNCLVge~l~VKIsDfGLsRdiYssDYYk~~~~t~lPIRWMppEsIly~kFTteSDVWs~GVvLWEIFsyG~Q  704 (774)
T KOG1026|consen  625 VHRDLATRNCLVGENLVVKISDFGLSRDIYSSDYYKVRGNTLLPIRWMPPESILYGKFTTESDVWSFGVVLWEIFSYGKQ  704 (774)
T ss_pred             cccchhhhhceeccceEEEecccccchhhhhhhhhcccCCceeeeecCCHHHhhcCcccchhhhhhhhhhhhhhhccccC
Confidence            99999999999999999999999999876522111 111233457899943343     378999999887 55443221


Q ss_pred             CC-----------------CCCCHHHHHHHHHHHHhhcccCcCCCCCHHHHHHHHccC
Q 045577          325 MK-----------------GPFSADELVKCIEVGLLCVQQRIEDWPTMSSVLTMLSNE  365 (392)
Q Consensus       325 ~~-----------------~~~~~~~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~L~~~  365 (392)
                      ..                 -+.+..+..++..+++.||+.+|++||+++||-..|+..
T Consensus       705 Py~glSn~EVIe~i~~g~lL~~Pe~CP~~vY~LM~~CW~~~P~~RPsF~eI~~~L~~~  762 (774)
T KOG1026|consen  705 PYYGLSNQEVIECIRAGQLLSCPENCPTEVYSLMLECWNENPKRRPSFKEIHSRLQAW  762 (774)
T ss_pred             cccccchHHHHHHHHcCCcccCCCCCCHHHHHHHHHHhhcCcccCCCHHHHHHHHHHH
Confidence            11                 122333444677899999999999999999999999875

>PHA02988 hypothetical protein; Provisional

Probab=99.82  E-value=1.2e-20  Score=178.18  Aligned_cols=159  Identities=12%  Similarity=0.053  Sum_probs=119.2

Q ss_pred             CCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEcCCCCCeEeeeeceE
Q 045577          199 GEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEINPNISDFGPAR  278 (392)
Q Consensus       199 ~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~~~~~~kl~DFGla~  278 (392)
                      ...+++|||++++++.....+... .......+++.+++.||.|||+..  +++||||||+||+++.++.+||+|||+++
T Consensus        95 ~~~~lv~Ey~~~g~L~~~l~~~~~-~~~~~~~~i~~~i~~~l~~lH~~~--~~~Hrdlkp~nill~~~~~~kl~dfg~~~  171 (283)
T PHA02988         95 PRLSLILEYCTRGYLREVLDKEKD-LSFKTKLDMAIDCCKGLYNLYKYT--NKPYKNLTSVSFLVTENYKLKIICHGLEK  171 (283)
T ss_pred             CceEEEEEeCCCCcHHHHHhhCCC-CChhHHHHHHHHHHHHHHHHHhcC--CCCCCcCChhhEEECCCCcEEEcccchHh
Confidence            467899999999999876654432 234447889999999999999742  57899999999999999999999999987


Q ss_pred             EeCCCCcceeceeeecccccCchhHHH--------HHHHhcCCCcc-eeecccccCCCCC-----------------CHH
Q 045577          279 IFGDQTEEVTGRVIGTQTLKTVPELLQ--------AWKLWSEGDPM-EIIDEQTKMKGPF-----------------SAD  332 (392)
Q Consensus       279 ~~~~~~~~~~~~~~gt~~y~a~~~~~~--------~~diws~G~v~-~~ld~~~~~~~~~-----------------~~~  332 (392)
                      .+....    ....|+..|+| ||+..        +.|+||+|+++ +++.+..++.+..                 +..
T Consensus       172 ~~~~~~----~~~~~~~~y~a-PE~~~~~~~~~~~k~Di~SlGvil~el~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~  246 (283)
T PHA02988        172 ILSSPP----FKNVNFMVYFS-YKMLNDIFSEYTIKDDIYSLGVVLWEIFTGKIPFENLTTKEIYDLIINKNNSLKLPLD  246 (283)
T ss_pred             hhcccc----ccccCcccccC-HHHhhhccccccchhhhhHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcCCCCCCCCc
Confidence            654211    12457888999 66552        67999999876 4444433322211                 112


Q ss_pred             HHHHHHHHHHhhcccCcCCCCCHHHHHHHHccC
Q 045577          333 ELVKCIEVGLLCVQQRIEDWPTMSSVLTMLSNE  365 (392)
Q Consensus       333 ~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~L~~~  365 (392)
                      ....+.+++.+||+.||++||++.++++.|+..
T Consensus       247 ~~~~l~~li~~cl~~dp~~Rps~~ell~~l~~~  279 (283)
T PHA02988        247 CPLEIKCIVEACTSHDSIKRPNIKEILYNLSLY  279 (283)
T ss_pred             CcHHHHHHHHHHhcCCcccCcCHHHHHHHHHHH
Confidence            233566788899999999999999999999764

>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor

Probab=99.82  E-value=1.6e-20  Score=176.09  Aligned_cols=176  Identities=17%  Similarity=0.218  Sum_probs=123.5

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhc---------cccchhhhhHHHHHHHhhhhcCcCCCCceeecc
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFEC---------SKYSSYVTNILYGIARVILYLPEDSRLEIIHRD  255 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~---------~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrD  255 (392)
                      |++.++.......++..+++|||+.++++.....+..-         ......+..++.|++.||.|||+.   +++|+|
T Consensus        68 ~~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~~vH~d  144 (277)
T cd05062          68 CHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNAN---KFVHRD  144 (277)
T ss_pred             CCCeeeEEEEEcCCCCeEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHHC---CcccCC
Confidence            44444444444445778999999999998775543211         112334678899999999999998   899999


Q ss_pred             cccceeEEcCCCCCeEeeeeceEEeCCCCc-ceeceeeecccccCchhHH------HHHHHhcCCCcc-eeec-ccccCC
Q 045577          256 HKTSNVLLDAEINPNISDFGPARIFGDQTE-EVTGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIID-EQTKMK  326 (392)
Q Consensus       256 lKp~NIll~~~~~~kl~DFGla~~~~~~~~-~~~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld-~~~~~~  326 (392)
                      |||+||+++.++.+||+|||+++....... .......++..|+| ||..      ...|+|++|+++ +++. +...+.
T Consensus       145 lkp~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~a-PE~~~~~~~~~~~Di~slG~~l~el~~~~~~p~~  223 (277)
T cd05062         145 LAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMS-PESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQ  223 (277)
T ss_pred             cchheEEEcCCCCEEECCCCCccccCCcceeecCCCCccCHhhcC-hhHhhcCCcCchhHHHHHHHHHHHHHcCCCCCCC
Confidence            999999999999999999999876532111 11112345678999 6654      357999999876 4443 222222


Q ss_pred             CCCC----------------HHHHHHHHHHHHhhcccCcCCCCCHHHHHHHHcc
Q 045577          327 GPFS----------------ADELVKCIEVGLLCVQQRIEDWPTMSSVLTMLSN  364 (392)
Q Consensus       327 ~~~~----------------~~~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~L~~  364 (392)
                      +...                ......+.+++.+|++.+|++||++.+++++|++
T Consensus       224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~~  277 (277)
T cd05062         224 GMSNEQVLRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKE  277 (277)
T ss_pred             CCCHHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHhhC
Confidence            2111                1122346678889999999999999999999863

Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh

>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]

Probab=99.82  E-value=7.5e-21  Score=190.56  Aligned_cols=177  Identities=21%  Similarity=0.272  Sum_probs=140.3

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEc
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLD  264 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~  264 (392)
                      |++.+|.....-.+..+.++.|||++|.|+.+..++......-++..++++||.|+.||-+.   +.+||||.+.|||++
T Consensus       689 HPNIIrLEGVVTks~PvMIiTEyMENGsLDsFLR~~DGqftviQLVgMLrGIAsGMkYLsdm---~YVHRDLAARNILVN  765 (996)
T KOG0196|consen  689 HPNIIRLEGVVTKSKPVMIITEYMENGSLDSFLRQNDGQFTVIQLVGMLRGIASGMKYLSDM---NYVHRDLAARNILVN  765 (996)
T ss_pred             CCcEEEEEEEEecCceeEEEhhhhhCCcHHHHHhhcCCceEeehHHHHHHHHHHHhHHHhhc---Cchhhhhhhhheeec
Confidence            99999998776666789999999999999998888776666666888999999999999777   899999999999999


Q ss_pred             CCCCCeEeeeeceEEeCCCCcceeceee--ecccccCchhHH------HHHHHhcCCCcc-eeeccccc-----------
Q 045577          265 AEINPNISDFGPARIFGDQTEEVTGRVI--GTQTLKTVPELL------QAWKLWSEGDPM-EIIDEQTK-----------  324 (392)
Q Consensus       265 ~~~~~kl~DFGla~~~~~~~~~~~~~~~--gt~~y~a~~~~~------~~~diws~G~v~-~~ld~~~~-----------  324 (392)
                      .+..+||+|||+++.+.+......++.-  -...|.| ||..      .+.|+||.|+++ |.+.-..+           
T Consensus       766 snLvCKVsDFGLSRvledd~~~~ytt~GGKIPiRWTA-PEAIa~RKFTsASDVWSyGIVmWEVmSyGERPYWdmSNQdVI  844 (996)
T KOG0196|consen  766 SNLVCKVSDFGLSRVLEDDPEAAYTTLGGKIPIRWTA-PEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVI  844 (996)
T ss_pred             cceEEEeccccceeecccCCCccccccCCccceeecC-hhHhhhcccCchhhccccceEEEEecccCCCcccccchHHHH
Confidence            9999999999999987644433222221  2346777 6654      378999999987 33322111           


Q ss_pred             ------CCCCCCHHHHHHHHHHHHhhcccCcCCCCCHHHHHHHHccC
Q 045577          325 ------MKGPFSADELVKCIEVGLLCVQQRIEDWPTMSSVLTMLSNE  365 (392)
Q Consensus       325 ------~~~~~~~~~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~L~~~  365 (392)
                            ++-+.+.++...+.+++++|||.|..+||.+.+|+.+|++.
T Consensus       845 kaIe~gyRLPpPmDCP~aL~qLMldCWqkdR~~RP~F~qiV~~lDkl  891 (996)
T KOG0196|consen  845 KAIEQGYRLPPPMDCPAALYQLMLDCWQKDRNRRPKFAQIVSTLDKL  891 (996)
T ss_pred             HHHHhccCCCCCCCCcHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHH
Confidence                  22233455666788899999999999999999999999875

>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase

Probab=99.82  E-value=1.7e-20  Score=178.51  Aligned_cols=170  Identities=18%  Similarity=0.239  Sum_probs=119.7

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEc
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLD  264 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~  264 (392)
                      |+++++.......+...+++|||+.+ ++.....+.........+..++.|++.||.|||+.   +|+||||||+||+++
T Consensus        62 h~niv~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dlkp~Nill~  137 (303)
T cd07869          62 HANIVLLHDIIHTKETLTLVFEYVHT-DLCQYMDKHPGGLHPENVKLFLFQLLRGLSYIHQR---YILHRDLKPQNLLIS  137 (303)
T ss_pred             CCCcCeEEEEEecCCeEEEEEECCCc-CHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEC
Confidence            45555554444445678999999974 44333333322334455788999999999999998   899999999999999


Q ss_pred             CCCCCeEeeeeceEEeCCCCcceeceeeecccccCchhHH-------HHHHHhcCCCcc-eeecccccCCCCCCHH-H--
Q 045577          265 AEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELL-------QAWKLWSEGDPM-EIIDEQTKMKGPFSAD-E--  333 (392)
Q Consensus       265 ~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~-------~~~diws~G~v~-~~ld~~~~~~~~~~~~-~--  333 (392)
                      .++.+||+|||+++....... ......|++.|+| ||+.       ...|+|+.|+++ +++.+...+.+..+.. .  
T Consensus       138 ~~~~~kl~Dfg~~~~~~~~~~-~~~~~~~~~~y~a-PE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~  215 (303)
T cd07869         138 DTGELKLADFGLARAKSVPSH-TYSNEVVTLWYRP-PDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDIQDQLE  215 (303)
T ss_pred             CCCCEEECCCCcceeccCCCc-cCCCCcccCCCCC-hHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHH
Confidence            999999999999976542211 1223567899999 6654       267999999876 4555544433211110 0  


Q ss_pred             ---------------------------------------------HHHHHHHHHhhcccCcCCCCCHHHHHH
Q 045577          334 ---------------------------------------------LVKCIEVGLLCVQQRIEDWPTMSSVLT  360 (392)
Q Consensus       334 ---------------------------------------------~~~~~~i~~~Cl~~dp~~RPsm~eVv~  360 (392)
                                                                   ...+.+++..|++.||++|||+.++++
T Consensus       216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dp~~R~s~~~~l~  287 (303)
T cd07869         216 RIFLVLGTPNEDTWPGVHSLPHFKPERFTLYSPKNLRQAWNKLSYVNHAEDLASKLLQCFPKNRLSAQAALS  287 (303)
T ss_pred             HHHHHhCCCChhhccchhhccccccccccccCCccHHHHhhccCCChHHHHHHHHHhccCchhccCHHHHhc
Confidence                                                         123457788999999999999998875

Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an

>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2

Probab=99.82  E-value=2.4e-20  Score=173.77  Aligned_cols=177  Identities=20%  Similarity=0.254  Sum_probs=127.7

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEc
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLD  264 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~  264 (392)
                      |+++++.....+..+..|++|||++++++....++.........+..++.|++.||.|||+.   +++|+||||+||+++
T Consensus        65 h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~---~i~H~dlkp~Nili~  141 (268)
T cd05063          65 HHNIIRLEGVVTKFKPAMIITEYMENGALDKYLRDHDGEFSSYQLVGMLRGIAAGMKYLSDM---NYVHRDLAARNILVN  141 (268)
T ss_pred             CCCeeEEEEEEccCCCcEEEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccchhhEEEc
Confidence            45555555555556778999999999998776655433345555788999999999999998   899999999999999


Q ss_pred             CCCCCeEeeeeceEEeCCCCccee--ceeeecccccCchhHH------HHHHHhcCCCcc-eeec-ccccCCCCCC----
Q 045577          265 AEINPNISDFGPARIFGDQTEEVT--GRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIID-EQTKMKGPFS----  330 (392)
Q Consensus       265 ~~~~~kl~DFGla~~~~~~~~~~~--~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld-~~~~~~~~~~----  330 (392)
                      .++.+|++|||++...........  .....+..|++ ||..      .+.|+|+.|+++ +++. +..++.....    
T Consensus       142 ~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~~-PE~~~~~~~~~~~Dv~slG~il~ell~~g~~p~~~~~~~~~~  220 (268)
T cd05063         142 SNLECKVSDFGLSRVLEDDPEGTYTTSGGKIPIRWTA-PEAIAYRKFTSASDVWSFGIVMWEVMSFGERPYWDMSNHEVM  220 (268)
T ss_pred             CCCcEEECCCccceecccccccceeccCCCcCceecC-HHHhhcCCcChHhHHHHHHHHHHHHHhCCCCCCCcCCHHHHH
Confidence            999999999999987642211111  11122456888 6653      367999999876 4454 4333221111    


Q ss_pred             ------------HHHHHHHHHHHHhhcccCcCCCCCHHHHHHHHccC
Q 045577          331 ------------ADELVKCIEVGLLCVQQRIEDWPTMSSVLTMLSNE  365 (392)
Q Consensus       331 ------------~~~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~L~~~  365 (392)
                                  .+....+.+++.+|++.+|++||+|.+|++.|++.
T Consensus       221 ~~i~~~~~~~~~~~~~~~~~~li~~c~~~~p~~Rp~~~~i~~~l~~~  267 (268)
T cd05063         221 KAINDGFRLPAPMDCPSAVYQLMLQCWQQDRARRPRFVDIVNLLDKL  267 (268)
T ss_pred             HHHhcCCCCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence                        11233566889999999999999999999999764

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored

>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]

Probab=99.82  E-value=6.8e-21  Score=177.00  Aligned_cols=158  Identities=23%  Similarity=0.295  Sum_probs=115.8

Q ss_pred             CCeeEEecCccCCCcChhhhhhh--ccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEcCCCCCeEeeeec
Q 045577          199 GEVFLMFEGIKLPDKSEFTCEFE--CSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEINPNISDFGP  276 (392)
Q Consensus       199 ~~~~lv~e~~~~~~l~~~~~~~~--~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~~~~~~kl~DFGl  276 (392)
                      +..++|+||++.+...+.+....  .......+..++.|+.+||.|||++   +|+||||||+|||++++|.+||+|||+
T Consensus        90 ~~l~lvfe~~d~DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H~~---~IlHRDLKPQNlLi~~~G~lKlaDFGl  166 (323)
T KOG0594|consen   90 GKLYLVFEFLDRDLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLHSH---GILHRDLKPQNLLISSSGVLKLADFGL  166 (323)
T ss_pred             ceEEEEEEeecccHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHHhC---CeecccCCcceEEECCCCcEeeeccch
Confidence            47899999998655444322111  1233455889999999999999998   899999999999999999999999999


Q ss_pred             eEEeCCCCcceeceeeecccccCchhHHH-------HHHHhcCCCcc-eeecccccCCCCCCHHHHH-------------
Q 045577          277 ARIFGDQTEEVTGRVIGTQTLKTVPELLQ-------AWKLWSEGDPM-EIIDEQTKMKGPFSADELV-------------  335 (392)
Q Consensus       277 a~~~~~~~~~~~~~~~gt~~y~a~~~~~~-------~~diws~G~v~-~~ld~~~~~~~~~~~~~~~-------------  335 (392)
                      |+...-..... ++.++|..|.| ||++.       ..|+|+.||++ |++..++.+++..+.+++.             
T Consensus       167 Ara~~ip~~~y-t~evvTlWYRa-PEvLlGs~~Ys~~vDiWs~GcIfaEm~~~~~LFpG~se~~ql~~If~~lGtP~e~~  244 (323)
T KOG0594|consen  167 ARAFSIPMRTY-TPEVVTLWYRA-PEVLLGSTSYSTSVDIWSLGCIFAEMFTRRPLFPGDSEIDQLFRIFRLLGTPNEKD  244 (323)
T ss_pred             HHHhcCCcccc-cccEEEeeccC-HHHhcCCCcCCCCcchHhHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHcCCCCccC
Confidence            99766333333 33578899999 77663       56999999987 5555555555544444433             


Q ss_pred             --------------------------------HHHHHHHhhcccCcCCCCCHHHHHHH
Q 045577          336 --------------------------------KCIEVGLLCVQQRIEDWPTMSSVLTM  361 (392)
Q Consensus       336 --------------------------------~~~~i~~~Cl~~dp~~RPsm~eVv~~  361 (392)
                                                      ...++..+|++.+|.+|.|....+++
T Consensus       245 Wp~v~~~~~~k~~f~~~~~~~~l~~~~~~~~~~~~dll~~~L~y~p~~R~Sa~~al~h  302 (323)
T KOG0594|consen  245 WPGVSSLPDYKAPFPKWPGPKDLSSILPKLDPDGIELLSKLLQYDPAKRISAKGALTH  302 (323)
T ss_pred             CCCccccccccccCcCCCCccchHHhccccCccHHHHHHHHhccCcccCcCHHHHhcC
Confidence                                            33446667888888888888777765

>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma

Probab=99.82  E-value=1.3e-20  Score=181.65  Aligned_cols=159  Identities=16%  Similarity=0.120  Sum_probs=118.5

Q ss_pred             CCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEcCCCCCeEeeeec
Q 045577          197 GDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEINPNISDFGP  276 (392)
Q Consensus       197 ~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~~~~~~kl~DFGl  276 (392)
                      .++..|+||||++++++......... ..+..+..++.|++.||.|||+.   +|+||||||+||+++.++.+||+|||+
T Consensus        66 ~~~~~~lv~Ey~~~g~L~~~l~~~~~-l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDikp~NIll~~~~~~kL~DfG~  141 (328)
T cd05593          66 TKDRLCFVMEYVNGGELFFHLSRERV-FSEDRTRFYGAEIVSALDYLHSG---KIVYRDLKLENLMLDKDGHIKITDFGL  141 (328)
T ss_pred             cCCEEEEEEeCCCCCCHHHHHHhcCC-CCHHHHHHHHHHHHHHHHHHHhC---CeEecccCHHHeEECCCCcEEEecCcC
Confidence            35678999999999998765544332 34445788999999999999998   899999999999999999999999999


Q ss_pred             eEEeCCCCcceeceeeecccccCchhHH------HHHHHhcCCCcc-eeecccccCCCCCCHHH---------------H
Q 045577          277 ARIFGDQTEEVTGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIIDEQTKMKGPFSADE---------------L  334 (392)
Q Consensus       277 a~~~~~~~~~~~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld~~~~~~~~~~~~~---------------~  334 (392)
                      ++..... ........||+.|+| ||..      ...|+|+.|+++ +++.+..++......+.               .
T Consensus       142 ~~~~~~~-~~~~~~~~gt~~y~a-PE~~~~~~~~~~~DiwslGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~p~~~~  219 (328)
T cd05593         142 CKEGITD-AATMKTFCGTPEYLA-PEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEDIKFPRTLS  219 (328)
T ss_pred             CccCCCc-ccccccccCCcCccC-hhhhcCCCCCccCCccccchHHHHHhhCCCCCCCCCHHHHHHHhccCCccCCCCCC
Confidence            8753211 112233578999999 7765      357999999986 56666444433221111               1


Q ss_pred             HHHHHHHHhhcccCcCCCC-----CHHHHHHH
Q 045577          335 VKCIEVGLLCVQQRIEDWP-----TMSSVLTM  361 (392)
Q Consensus       335 ~~~~~i~~~Cl~~dp~~RP-----sm~eVv~~  361 (392)
                      ..+.+++..|++.||++||     ++.++++.
T Consensus       220 ~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h  251 (328)
T cd05593         220 ADAKSLLSGLLIKDPNKRLGGGPDDAKEIMRH  251 (328)
T ss_pred             HHHHHHHHHHcCCCHHHcCCCCCCCHHHHhcC
Confidence            2456778899999999997     78888753

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate

>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase

Probab=99.82  E-value=2.1e-20  Score=176.59  Aligned_cols=170  Identities=18%  Similarity=0.227  Sum_probs=118.5

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEc
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLD  264 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~  264 (392)
                      |+++++........+..+++|||+++ ++...............+..++.|++.||.|||+.   +|+||||||+||+++
T Consensus        62 h~niv~~~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~dlkp~Nil~~  137 (288)
T cd07871          62 HANIVTLHDIIHTERCLTLVFEYLDS-DLKQYLDNCGNLMSMHNVKIFMFQLLRGLSYCHKR---KILHRDLKPQNLLIN  137 (288)
T ss_pred             CCCEeeEEEEEcCCCeEEEEEeCCCc-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEC
Confidence            45555554444445668999999985 55543332222234455788999999999999998   899999999999999


Q ss_pred             CCCCCeEeeeeceEEeCCCCcceeceeeecccccCchhHH-------HHHHHhcCCCcc-eeecccccCCCCCCHHH---
Q 045577          265 AEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELL-------QAWKLWSEGDPM-EIIDEQTKMKGPFSADE---  333 (392)
Q Consensus       265 ~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~-------~~~diws~G~v~-~~ld~~~~~~~~~~~~~---  333 (392)
                      .++.+||+|||+++....... ......+++.|+| ||..       ...|+|+.|+++ +++.+++.+.+....+.   
T Consensus       138 ~~~~~kl~DfG~~~~~~~~~~-~~~~~~~~~~y~a-PE~~~~~~~~~~~~DiwslG~~l~~l~~g~~pf~~~~~~~~~~~  215 (288)
T cd07871         138 EKGELKLADFGLARAKSVPTK-TYSNEVVTLWYRP-PDVLLGSTEYSTPIDMWGVGCILYEMATGRPMFPGSTVKEELHL  215 (288)
T ss_pred             CCCCEEECcCcceeeccCCCc-cccCceecccccC-hHHhcCCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHH
Confidence            999999999999986542211 1223467899999 6654       368999999876 55555433322211111   


Q ss_pred             ------------------------------------------HHHHHHHHHhhcccCcCCCCCHHHHHH
Q 045577          334 ------------------------------------------LVKCIEVGLLCVQQRIEDWPTMSSVLT  360 (392)
Q Consensus       334 ------------------------------------------~~~~~~i~~~Cl~~dp~~RPsm~eVv~  360 (392)
                                                                ...+.+++..|++.||.+|||+.|+++
T Consensus       216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dp~~R~t~~~~l~  284 (288)
T cd07871         216 IFRLLGTPTEETWPGITSNEEFRSYLFPQYRAQPLINHAPRLDTDGIDLLSSLLLYETKSRISAEAALR  284 (288)
T ss_pred             HHHHhCCCChHHhhccccchhhhccccCccCCCchHHhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence                                                      123456777899999999999888864

Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament

>PLN00034 mitogen-activated protein kinase kinase; Provisional

Probab=99.82  E-value=1.1e-20  Score=183.97  Aligned_cols=167  Identities=21%  Similarity=0.260  Sum_probs=122.9

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEc
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLD  264 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~  264 (392)
                      |++.++.......++..+++|||++++++....     ......+..++.||+.||.|||+.   +|+||||||+||+++
T Consensus       131 h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~-----~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~  202 (353)
T PLN00034        131 HPNVVKCHDMFDHNGEIQVLLEFMDGGSLEGTH-----IADEQFLADVARQILSGIAYLHRR---HIVHRDIKPSNLLIN  202 (353)
T ss_pred             CCCcceeeeEeccCCeEEEEEecCCCCcccccc-----cCCHHHHHHHHHHHHHHHHHHHHC---CEeecCCCHHHEEEc
Confidence            556666555544567899999999998875421     112334678999999999999998   899999999999999


Q ss_pred             CCCCCeEeeeeceEEeCCCCcceeceeeecccccCchhHH-----------HHHHHhcCCCcc-eeecccccCCCCC---
Q 045577          265 AEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELL-----------QAWKLWSEGDPM-EIIDEQTKMKGPF---  329 (392)
Q Consensus       265 ~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~-----------~~~diws~G~v~-~~ld~~~~~~~~~---  329 (392)
                      .++.+||+|||+++.+.... .......||..|+| ||..           .+.|+|++|+++ +++.++..+....   
T Consensus       203 ~~~~~kL~DfG~~~~~~~~~-~~~~~~~gt~~y~a-PE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~  280 (353)
T PLN00034        203 SAKNVKIADFGVSRILAQTM-DPCNSSVGTIAYMS-PERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFGVGRQGD  280 (353)
T ss_pred             CCCCEEEcccccceeccccc-ccccccccCccccC-ccccccccccCcCCCcchhHHHHHHHHHHHHhCCCCCCCCCCcc
Confidence            99999999999998764221 11233578999999 6653           268999999876 5555543332111   


Q ss_pred             ----------------CHHHHHHHHHHHHhhcccCcCCCCCHHHHHHH
Q 045577          330 ----------------SADELVKCIEVGLLCVQQRIEDWPTMSSVLTM  361 (392)
Q Consensus       330 ----------------~~~~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~  361 (392)
                                      .......+.+++..|++.+|++||++.|+++.
T Consensus       281 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rpt~~ell~h  328 (353)
T PLN00034        281 WASLMCAICMSQPPEAPATASREFRHFISCCLQREPAKRWSAMQLLQH  328 (353)
T ss_pred             HHHHHHHHhccCCCCCCCccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence                            11112356778889999999999999999876

>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

Probab=99.82  E-value=1.5e-20  Score=180.17  Aligned_cols=167  Identities=20%  Similarity=0.148  Sum_probs=122.6

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEc
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLD  264 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~  264 (392)
                      |++.++.......++..|++|||++++++.....+.. ...+..+..++.|++.||.|||+.   +|+||||||+||+++
T Consensus        57 h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~  132 (318)
T cd05582          57 HPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEV-MFTEEDVKFYLAELALALDHLHSL---GIIYRDLKPENILLD  132 (318)
T ss_pred             CCCcccEEEEEEcCCEEEEEEcCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHeEEC
Confidence            5555555444445677999999999998876543322 234555788999999999999998   899999999999999


Q ss_pred             CCCCCeEeeeeceEEeCCCCcceeceeeecccccCchhHH------HHHHHhcCCCcc-eeecccccCCCCCCHHH----
Q 045577          265 AEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIIDEQTKMKGPFSADE----  333 (392)
Q Consensus       265 ~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld~~~~~~~~~~~~~----  333 (392)
                      .++.+||+|||+++...... .......|++.|++ ||..      .+.|+|+.|+++ +++.++.++......+.    
T Consensus       133 ~~~~~kL~Dfg~~~~~~~~~-~~~~~~~g~~~y~a-PE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~i  210 (318)
T cd05582         133 EEGHIKLTDFGLSKESIDHE-KKAYSFCGTVEYMA-PEVVNRRGHTQSADWWSFGVLMFEMLTGSLPFQGKDRKETMTMI  210 (318)
T ss_pred             CCCcEEEeeccCCcccCCCC-CceecccCChhhcC-HHHHcCCCCCCccceeccceEeeeeccCCCCCCCCCHHHHHHHH
Confidence            99999999999987654221 12233578999999 7765      368999999876 56665444433221111    


Q ss_pred             -----------HHHHHHHHHhhcccCcCCCCCHHH
Q 045577          334 -----------LVKCIEVGLLCVQQRIEDWPTMSS  357 (392)
Q Consensus       334 -----------~~~~~~i~~~Cl~~dp~~RPsm~e  357 (392)
                                 ...+.+++..|++.||++||++.+
T Consensus       211 ~~~~~~~p~~~~~~~~~li~~~l~~~P~~R~~a~~  245 (318)
T cd05582         211 LKAKLGMPQFLSPEAQSLLRALFKRNPANRLGAGP  245 (318)
T ss_pred             HcCCCCCCCCCCHHHHHHHHHHhhcCHhHcCCCCC
Confidence                       224556778999999999999544

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate

>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B

Probab=99.82  E-value=2.3e-20  Score=176.23  Aligned_cols=177  Identities=20%  Similarity=0.240  Sum_probs=125.8

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhh------------ccccchhhhhHHHHHHHhhhhcCcCCCCcee
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFE------------CSKYSSYVTNILYGIARVILYLPEDSRLEII  252 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~------------~~~~~~~~~~i~~~ia~gL~yLH~~~~~~ii  252 (392)
                      |++.++.......++..+++|||++++++........            ....+..+..++.|++.||.|||++   +++
T Consensus        66 h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~~---~i~  142 (288)
T cd05093          66 HEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQ---HFV  142 (288)
T ss_pred             CCCcceEEEEEecCCccEEEEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhC---Cee
Confidence            3444444333334567899999999998876443221            1124455788999999999999998   899


Q ss_pred             ecccccceeEEcCCCCCeEeeeeceEEeCCCC-cceeceeeecccccCchhHH------HHHHHhcCCCcc-eeec-ccc
Q 045577          253 HRDHKTSNVLLDAEINPNISDFGPARIFGDQT-EEVTGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIID-EQT  323 (392)
Q Consensus       253 HrDlKp~NIll~~~~~~kl~DFGla~~~~~~~-~~~~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld-~~~  323 (392)
                      ||||||+||+++.++.+||+|||+++...... ........++..|+| ||..      .+.|+|++|+++ +++. +.+
T Consensus       143 H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~a-PE~~~~~~~~~~sDiwslG~il~~l~t~g~~  221 (288)
T cd05093         143 HRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMP-PESIMYRKFTTESDVWSLGVVLWEIFTYGKQ  221 (288)
T ss_pred             ecccCcceEEEccCCcEEeccCCccccccCCceeecCCCCCccccccC-HHHhccCCCCchhhHHHHHHHHHHHHhCCCC
Confidence            99999999999999999999999987653211 111222345678999 7754      368999999876 4544 333


Q ss_pred             cCCCCCC----------------HHHHHHHHHHHHhhcccCcCCCCCHHHHHHHHccC
Q 045577          324 KMKGPFS----------------ADELVKCIEVGLLCVQQRIEDWPTMSSVLTMLSNE  365 (392)
Q Consensus       324 ~~~~~~~----------------~~~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~L~~~  365 (392)
                      ++.....                ......+.+++..|++.+|.+||++.+|.+.|+..
T Consensus       222 p~~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~v~~~l~~~  279 (288)
T cd05093         222 PWYQLSNNEVIECITQGRVLQRPRTCPKEVYDLMLGCWQREPHMRLNIKEIHSLLQNL  279 (288)
T ss_pred             CCCCCCHHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHH
Confidence            3221111                11223577888999999999999999999999876

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly

>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

Probab=99.82  E-value=1.4e-20  Score=180.33  Aligned_cols=169  Identities=18%  Similarity=0.130  Sum_probs=122.8

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEc
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLD  264 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~  264 (392)
                      |++.++.......++..|++|||++++++........ ......+..++.|++.||.|||+.   +|+||||||+||+++
T Consensus        55 hp~i~~~~~~~~~~~~~~lv~e~~~gg~L~~~~~~~~-~~~~~~~~~~~~qi~~al~~LH~~---~ivH~dlkp~Nill~  130 (316)
T cd05592          55 HPFLTHLFCTFQTKEHLFFVMEYLNGGDLMFHIQSSG-RFDEARARFYAAEIICGLQFLHKK---GIIYRDLKLDNVLLD  130 (316)
T ss_pred             CCCccceeeEEEcCCEEEEEEcCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHC---CEEeCCCCHHHeEEC
Confidence            4555555444444567899999999999876544332 234455778899999999999998   899999999999999


Q ss_pred             CCCCCeEeeeeceEEeCCCCcceeceeeecccccCchhHH------HHHHHhcCCCcc-eeecccccCCCCCCHH-----
Q 045577          265 AEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIIDEQTKMKGPFSAD-----  332 (392)
Q Consensus       265 ~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld~~~~~~~~~~~~-----  332 (392)
                      .++.+||+|||+++...... .......||+.|+| ||..      ...|+|+.|+++ +++.+..++.+....+     
T Consensus       131 ~~~~~kL~Dfg~a~~~~~~~-~~~~~~~gt~~y~a-PE~~~~~~~~~~~DvwslG~il~ell~G~~Pf~~~~~~~~~~~i  208 (316)
T cd05592         131 KDGHIKIADFGMCKENMNGE-GKASTFCGTPDYIA-PEILKGQKYNESVDWWSFGVLLYEMLIGQSPFHGEDEDELFDSI  208 (316)
T ss_pred             CCCCEEEccCcCCeECCCCC-CccccccCCccccC-HHHHcCCCCCCcccchhHHHHHHHHHhCCCCCCCCCHHHHHHHH
Confidence            99999999999998653222 22334678999999 7764      357999999876 5555544443322111     


Q ss_pred             ----------HHHHHHHHHHhhcccCcCCCCCHH-HHH
Q 045577          333 ----------ELVKCIEVGLLCVQQRIEDWPTMS-SVL  359 (392)
Q Consensus       333 ----------~~~~~~~i~~~Cl~~dp~~RPsm~-eVv  359 (392)
                                ....+.+++..|++.+|++||++. ++.
T Consensus       209 ~~~~~~~~~~~~~~~~~ll~~~l~~~P~~R~~~~~~l~  246 (316)
T cd05592         209 LNDRPHFPRWISKEAKDCLSKLFERDPTKRLGVDGDIR  246 (316)
T ss_pred             HcCCCCCCCCCCHHHHHHHHHHccCCHHHcCCChHHHH
Confidence                      122455677899999999999875 443

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp

>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha

Probab=99.81  E-value=2.3e-20  Score=184.62  Aligned_cols=133  Identities=23%  Similarity=0.333  Sum_probs=100.1

Q ss_pred             hhhHHHHHHHhhhhcCcCCCCceeecccccceeEEcCCCCCeEeeeeceEEeCCCCc-ceeceeeecccccCchhHH---
Q 045577          229 VTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEINPNISDFGPARIFGDQTE-EVTGRVIGTQTLKTVPELL---  304 (392)
Q Consensus       229 ~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~~-~~~~~~~gt~~y~a~~~~~---  304 (392)
                      +..++.|++.||.|||+.   +++||||||+||+++.++.+||+|||+++....... .......++..|+| ||..   
T Consensus       239 ~~~~~~qi~~aL~~LH~~---~ivH~dikp~Nill~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~a-PE~~~~~  314 (400)
T cd05105         239 LLSFTYQVARGMEFLASK---NCVHRDLAARNVLLAQGKIVKICDFGLARDIMHDSNYVSKGSTFLPVKWMA-PESIFDN  314 (400)
T ss_pred             HHHHHHHHHHHHHHHHhC---CeeCCCCChHhEEEeCCCEEEEEeCCcceeccccccccccCCcCCCcceEC-hhhhcCC
Confidence            567899999999999998   899999999999999999999999999987542211 12222456778999 6654   


Q ss_pred             ---HHHHHhcCCCcc-eeec-ccccCCCCC-----------------CHHHHHHHHHHHHhhcccCcCCCCCHHHHHHHH
Q 045577          305 ---QAWKLWSEGDPM-EIID-EQTKMKGPF-----------------SADELVKCIEVGLLCVQQRIEDWPTMSSVLTML  362 (392)
Q Consensus       305 ---~~~diws~G~v~-~~ld-~~~~~~~~~-----------------~~~~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~L  362 (392)
                         .+.|+|+.|+++ +++. +..++....                 +......+.+++..|++.+|++||++.+|.++|
T Consensus       315 ~~~~~~DiwSlGvil~ellt~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~l  394 (400)
T cd05105         315 LYTTLSDVWSYGILLWEIFSLGGTPYPGMIVDSTFYNKIKSGYRMAKPDHATQEVYDIMVKCWNSEPEKRPSFLHLSDIV  394 (400)
T ss_pred             CCCchhhHHHHHHHHHHHHHCCCCCCcccchhHHHHHHHhcCCCCCCCccCCHHHHHHHHHHCccCHhHCcCHHHHHHHH
Confidence               368999999876 4443 322221111                 112234577888999999999999999999999


Q ss_pred             ccC
Q 045577          363 SNE  365 (392)
Q Consensus       363 ~~~  365 (392)
                      +..
T Consensus       395 ~~l  397 (400)
T cd05105         395 ESL  397 (400)
T ss_pred             HHH
Confidence            875

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-

>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=99.81  E-value=2.9e-20  Score=173.28  Aligned_cols=170  Identities=15%  Similarity=0.161  Sum_probs=122.0

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEc
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLD  264 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~  264 (392)
                      |++.++.......+...+++|||++++.+.....+.........+.+++.||++||.|||+.   +|+||||||+||+++
T Consensus        63 hp~iv~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~Nill~  139 (262)
T cd05077          63 HKHIVLLYGVCVRDVENIMVEEFVEFGPLDLFMHRKSDVLTTPWKFKVAKQLASALSYLEDK---DLVHGNVCTKNILLA  139 (262)
T ss_pred             CCCEeeEEEEEecCCCCEEEEecccCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhC---CeECCCCCcccEEEe
Confidence            44555444433334678999999999988776655444445556789999999999999998   899999999999998


Q ss_pred             CCCC-------CeEeeeeceEEeCCCCcceeceeeecccccCchhHHH-------HHHHhcCCCcce-ee-cccccCCCC
Q 045577          265 AEIN-------PNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELLQ-------AWKLWSEGDPME-II-DEQTKMKGP  328 (392)
Q Consensus       265 ~~~~-------~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~~-------~~diws~G~v~~-~l-d~~~~~~~~  328 (392)
                      .++.       +|++|||++.....     .....++..|+| ||...       +.|+|+.|+++. ++ .+...+...
T Consensus       140 ~~~~~~~~~~~~~l~d~g~~~~~~~-----~~~~~~~~~y~a-PE~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~  213 (262)
T cd05077         140 REGIDGECGPFIKLSDPGIPITVLS-----RQECVERIPWIA-PECVEDSKNLSIAADKWSFGTTLWEICYNGEIPLKDK  213 (262)
T ss_pred             cCCccCCCCceeEeCCCCCCccccC-----cccccccccccC-hhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCc
Confidence            6654       79999998865431     112456788999 66542       579999998773 43 332222111


Q ss_pred             CC--------------HHHHHHHHHHHHhhcccCcCCCCCHHHHHHHHc
Q 045577          329 FS--------------ADELVKCIEVGLLCVQQRIEDWPTMSSVLTMLS  363 (392)
Q Consensus       329 ~~--------------~~~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~L~  363 (392)
                      ..              ......+.+++..|++.||++||++.+|++.|+
T Consensus       214 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rp~~~~il~~~~  262 (262)
T cd05077         214 TLAEKERFYEGQCMLVTPSCKELADLMTHCMNYDPNQRPFFRAIMRDIN  262 (262)
T ss_pred             chhHHHHHHhcCccCCCCChHHHHHHHHHHcCCChhhCcCHHHHHHhcC
Confidence            10              011245667888999999999999999998874

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom

>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases

Probab=99.81  E-value=2.9e-20  Score=172.25  Aligned_cols=162  Identities=19%  Similarity=0.267  Sum_probs=118.2

Q ss_pred             CCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEcCCCCCeEeeeece
Q 045577          198 DGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEINPNISDFGPA  277 (392)
Q Consensus       198 ~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~~~~~~kl~DFGla  277 (392)
                      .+..|++|||++++++............+..+..++.|++.||.|||+.   +++||||||+||+++.++.+||+|||++
T Consensus        71 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~p~ni~i~~~~~~kl~dfg~~  147 (256)
T cd05059          71 QRPIFIVTEYMANGCLLNYLRERKGKLGTEWLLDMCSDVCEAMEYLESN---GFIHRDLAARNCLVGEDNVVKVSDFGLA  147 (256)
T ss_pred             CCceEEEEecCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHC---CcccccccHhhEEECCCCcEEECCcccc
Confidence            4568999999999988776554333344555789999999999999998   8999999999999999999999999999


Q ss_pred             EEeCCCCcceeceeeecccccCchhHH------HHHHHhcCCCcc-eeec-ccccCCCCCCH----------------HH
Q 045577          278 RIFGDQTEEVTGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIID-EQTKMKGPFSA----------------DE  333 (392)
Q Consensus       278 ~~~~~~~~~~~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld-~~~~~~~~~~~----------------~~  333 (392)
                      +...+..........++..|++ ||..      ...|+|+.|+++ +++. +..++....+.                ..
T Consensus       148 ~~~~~~~~~~~~~~~~~~~y~~-Pe~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~  226 (256)
T cd05059         148 RYVLDDQYTSSQGTKFPVKWAP-PEVFDYSRFSSKSDVWSFGVLMWEVFSEGKMPYERFSNSEVVESVSAGYRLYRPKLA  226 (256)
T ss_pred             eecccccccccCCCCCCccccC-HHHhccCCCCchhhHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHcCCcCCCCCCC
Confidence            8654221111111223456888 6654      268999999876 4444 32222211111                12


Q ss_pred             HHHHHHHHHhhcccCcCCCCCHHHHHHHHc
Q 045577          334 LVKCIEVGLLCVQQRIEDWPTMSSVLTMLS  363 (392)
Q Consensus       334 ~~~~~~i~~~Cl~~dp~~RPsm~eVv~~L~  363 (392)
                      ...+.+++.+|++.+|++||++.++++.|.
T Consensus       227 ~~~~~~li~~cl~~~p~~Rpt~~~~l~~l~  256 (256)
T cd05059         227 PTEVYTIMYSCWHEKPEDRPAFKKLLSQLT  256 (256)
T ss_pred             CHHHHHHHHHHhcCChhhCcCHHHHHHHhC
Confidence            335778888999999999999999999873

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows

>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]

Probab=99.81  E-value=9.7e-21  Score=183.38  Aligned_cols=162  Identities=18%  Similarity=0.161  Sum_probs=116.9

Q ss_pred             CccccccCcCCCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEcCC
Q 045577          187 GCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAE  266 (392)
Q Consensus       187 GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~~~  266 (392)
                      -.|+..=.+-+...+||+|||+++||....+.+..++. +.++..++.+++.|+.-+|+.   ++|||||||+|+|||..
T Consensus       202 ~vVKLyYsFQD~~~LYLiMEylPGGD~mTLL~~~~~L~-e~~arfYiaE~vlAI~~iH~~---gyIHRDIKPdNlLiD~~  277 (550)
T KOG0605|consen  202 WVVKLYYSFQDKEYLYLIMEYLPGGDMMTLLMRKDTLT-EDWARFYIAETVLAIESIHQL---GYIHRDIKPDNLLIDAK  277 (550)
T ss_pred             cEEEEEEEecCCCeeEEEEEecCCccHHHHHHhcCcCc-hHHHHHHHHHHHHHHHHHHHc---CcccccCChhheeecCC
Confidence            33443333334567999999999999998877766655 344677888999999999998   99999999999999999


Q ss_pred             CCCeEeeeeceEEeCC-----------------------CCc-----c------------------eeceeeecccccCc
Q 045577          267 INPNISDFGPARIFGD-----------------------QTE-----E------------------VTGRVIGTQTLKTV  300 (392)
Q Consensus       267 ~~~kl~DFGla~~~~~-----------------------~~~-----~------------------~~~~~~gt~~y~a~  300 (392)
                      |++||+||||+.-+..                       ...     .                  ..-..+|||-||| 
T Consensus       278 GHiKLSDFGLs~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiA-  356 (550)
T KOG0605|consen  278 GHIKLSDFGLSTGLDKKHRIESYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIA-  356 (550)
T ss_pred             CCEeeccccccchhhhhhhhhhhcchhhhhhhhccCCCccccccccccchhhHHHHHHHHHhhhhhhhhcccCCccccc-
Confidence            9999999999853210                       000     0                  0011479999999 


Q ss_pred             hhHHH------HHHHhcCCCcc-eeecccccCCCCCCHHHHHHHHHHHHhhcccCcCCCCC
Q 045577          301 PELLQ------AWKLWSEGDPM-EIIDEQTKMKGPFSADELVKCIEVGLLCVQQRIEDWPT  354 (392)
Q Consensus       301 ~~~~~------~~diws~G~v~-~~ld~~~~~~~~~~~~~~~~~~~i~~~Cl~~dp~~RPs  354 (392)
                      ||++.      .+|.||+||++ |++-+-+++.++.+.+...+++. -..||+.-++.+.+
T Consensus       357 PEVll~kgY~~~cDwWSLG~ImyEmLvGyPPF~s~tp~~T~rkI~n-wr~~l~fP~~~~~s  416 (550)
T KOG0605|consen  357 PEVLLGKGYGKECDWWSLGCIMYEMLVGYPPFCSETPQETYRKIVN-WRETLKFPEEVDLS  416 (550)
T ss_pred             hHHHhcCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHH-HhhhccCCCcCccc
Confidence            77764      67999999987 78888777777666665555443 22356554444433

>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases

Probab=99.81  E-value=2.8e-20  Score=176.21  Aligned_cols=175  Identities=20%  Similarity=0.235  Sum_probs=122.8

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhh-----------ccccchhhhhHHHHHHHhhhhcCcCCCCceee
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFE-----------CSKYSSYVTNILYGIARVILYLPEDSRLEIIH  253 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~-----------~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiH  253 (392)
                      |++.++.....+..+..+++|||++++++........           .......+..++.|++.||.|||+.   +++|
T Consensus        76 h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~---~i~H  152 (295)
T cd05097          76 NPNIIRLLGVCVSDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLASL---NFVH  152 (295)
T ss_pred             CCCcCeEEEEEcCCCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHhc---Ceec
Confidence            4444444444445677899999999999877554321           1123445688999999999999998   8999


Q ss_pred             cccccceeEEcCCCCCeEeeeeceEEeCCCC-cceeceeeecccccCchhHH------HHHHHhcCCCcc-eeec--ccc
Q 045577          254 RDHKTSNVLLDAEINPNISDFGPARIFGDQT-EEVTGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIID--EQT  323 (392)
Q Consensus       254 rDlKp~NIll~~~~~~kl~DFGla~~~~~~~-~~~~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld--~~~  323 (392)
                      +||||+||+++.++.+||+|||++....... ........++..|+| ||..      .+.|+|++|+++ +++.  +..
T Consensus       153 ~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~a-PE~~~~~~~~~~~DvwSlG~~l~el~~~~~~~  231 (295)
T cd05097         153 RDLATRNCLVGNHYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMA-WESILLGKFTTASDVWAFGVTLWEMFTLCKEQ  231 (295)
T ss_pred             cccChhhEEEcCCCcEEecccccccccccCcceeccCcCcCceeecC-hhhhccCCcCchhhHHHHHHHHHHHHHcCCCC
Confidence            9999999999999999999999987654221 111222344678888 6643      478999999876 3332  111


Q ss_pred             cCCCCC-----------------------CHHHHHHHHHHHHhhcccCcCCCCCHHHHHHHHc
Q 045577          324 KMKGPF-----------------------SADELVKCIEVGLLCVQQRIEDWPTMSSVLTMLS  363 (392)
Q Consensus       324 ~~~~~~-----------------------~~~~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~L~  363 (392)
                      .+....                       +......+.+++.+|++.+|++||+|.+|++.|+
T Consensus       232 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~RPs~~~i~~~l~  294 (295)
T cd05097         232 PYSLLSDEQVIENTGEFFRNQGRQIYLSQTPLCPSPVFKLMMRCWSRDIKDRPTFNKIHHFLR  294 (295)
T ss_pred             CCcccChHHHHHHHHHhhhhccccccCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHh
Confidence            111100                       0111245778889999999999999999999986

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including

>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta

Probab=99.81  E-value=1.6e-20  Score=180.26  Aligned_cols=165  Identities=18%  Similarity=0.149  Sum_probs=119.7

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEc
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLD  264 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~  264 (392)
                      |++.++........+..|++|||++++++.....+... .....+..++.|++.||.|||+.   +++||||||+||+++
T Consensus        55 h~~iv~~~~~~~~~~~~~iv~Ey~~~g~L~~~i~~~~~-l~~~~~~~~~~ql~~~L~~lH~~---~ivH~dlkp~NIli~  130 (320)
T cd05590          55 HPFLTQLYCCFQTPDRLFFVMEFVNGGDLMFHIQKSRR-FDEARARFYAAEITSALMFLHDK---GIIYRDLKLDNVLLD  130 (320)
T ss_pred             CCchhceeeEEEcCCEEEEEEcCCCCchHHHHHHHcCC-CCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCCHHHeEEC
Confidence            34444443333345678999999999998765544332 34445788999999999999998   899999999999999


Q ss_pred             CCCCCeEeeeeceEEeCCCCcceeceeeecccccCchhHHH------HHHHhcCCCcc-eeecccccCCCCCCHHH----
Q 045577          265 AEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELLQ------AWKLWSEGDPM-EIIDEQTKMKGPFSADE----  333 (392)
Q Consensus       265 ~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~~------~~diws~G~v~-~~ld~~~~~~~~~~~~~----  333 (392)
                      .++.+||+|||+++..... ........||+.|+| ||...      ..|+|+.|+++ +++.+..++......+.    
T Consensus       131 ~~~~~kL~DfG~~~~~~~~-~~~~~~~~gt~~y~a-PE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~i  208 (320)
T cd05590         131 HEGHCKLADFGMCKEGIFN-GKTTSTFCGTPDYIA-PEILQEMLYGPSVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAI  208 (320)
T ss_pred             CCCcEEEeeCCCCeecCcC-CCcccccccCccccC-HHHHcCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHHHHHHHH
Confidence            9999999999998764321 122233578999999 77653      57999999876 56655444433222111    


Q ss_pred             -----------HHHHHHHHHhhcccCcCCCCCH
Q 045577          334 -----------LVKCIEVGLLCVQQRIEDWPTM  355 (392)
Q Consensus       334 -----------~~~~~~i~~~Cl~~dp~~RPsm  355 (392)
                                 ...+.+++..|++.||++||++
T Consensus       209 ~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~~~  241 (320)
T cd05590         209 LNDEVVYPTWLSQDAVDILKAFMTKNPTMRLGS  241 (320)
T ss_pred             hcCCCCCCCCCCHHHHHHHHHHcccCHHHCCCC
Confidence                       2245577889999999999997

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal

>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

Probab=99.81  E-value=3.4e-20  Score=172.20  Aligned_cols=164  Identities=20%  Similarity=0.244  Sum_probs=120.7

Q ss_pred             CCCCeeEEecCccCCCcChhhhhhh-ccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEcCCCCCeEeeee
Q 045577          197 GDGEVFLMFEGIKLPDKSEFTCEFE-CSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEINPNISDFG  275 (392)
Q Consensus       197 ~~~~~~lv~e~~~~~~l~~~~~~~~-~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~~~~~~kl~DFG  275 (392)
                      .++..+++|||++++++........ +......+.+++.|++.||.|||+.   +++|+||||+||+++.++.+||+|||
T Consensus        72 ~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~l~dfg  148 (261)
T cd05068          72 LEEPIYIVTELMKYGSLLEYLQGGAGRALKLPQLIDMAAQVASGMAYLEAQ---NYIHRDLAARNVLVGENNICKVADFG  148 (261)
T ss_pred             cCCCeeeeeecccCCcHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeccCCcceEEEcCCCCEEECCcc
Confidence            3467899999999998877654433 2335556789999999999999998   89999999999999999999999999


Q ss_pred             ceEEeCCCCcceeceeeecccccCchhHH------HHHHHhcCCCcc-eeec-ccccCCCCC----------------CH
Q 045577          276 PARIFGDQTEEVTGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIID-EQTKMKGPF----------------SA  331 (392)
Q Consensus       276 la~~~~~~~~~~~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld-~~~~~~~~~----------------~~  331 (392)
                      +++...............+..|++ ||..      ...|+|++|+++ +++. ++.++.+..                ..
T Consensus       149 ~~~~~~~~~~~~~~~~~~~~~y~a-PE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~  227 (261)
T cd05068         149 LARVIKEDIYEAREGAKFPIKWTA-PEAALYNRFSIKSDVWSFGILLTEIVTYGRMPYPGMTNAEVLQQVDQGYRMPCPP  227 (261)
T ss_pred             eEEEccCCcccccCCCcCceeccC-ccccccCCCCchhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCCCCC
Confidence            998765221111111223457888 6653      368999999876 4444 332222211                11


Q ss_pred             HHHHHHHHHHHhhcccCcCCCCCHHHHHHHHcc
Q 045577          332 DELVKCIEVGLLCVQQRIEDWPTMSSVLTMLSN  364 (392)
Q Consensus       332 ~~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~L~~  364 (392)
                      .....+.+++.+|++.+|++||++.++++.|+.
T Consensus       228 ~~~~~~~~li~~~l~~~P~~Rp~~~~l~~~l~~  260 (261)
T cd05068         228 GCPKELYDIMLDCWKEDPDDRPTFETLQWKLED  260 (261)
T ss_pred             cCCHHHHHHHHHHhhcCcccCCCHHHHHHHHhc
Confidence            223467788889999999999999999999985

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a

>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta

Probab=99.81  E-value=2.5e-20  Score=179.23  Aligned_cols=170  Identities=15%  Similarity=0.071  Sum_probs=121.0

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEc
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLD  264 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~  264 (392)
                      |++.++.......++..|+||||++++++.....+... ..+..+..++.|++.||.|||+.   +|+||||||+||+++
T Consensus        54 hp~i~~~~~~~~~~~~~~lv~E~~~~~~L~~~l~~~~~-~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~  129 (323)
T cd05595          54 HPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERV-FTEERARFYGAEIVSALEYLHSR---DVVYRDIKLENLMLD  129 (323)
T ss_pred             CCCCcceeeEEecCCEEEEEEeCCCCCcHHHHHHHcCC-CCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHEEEc
Confidence            33333333333335678999999999998765544433 24455788999999999999998   899999999999999


Q ss_pred             CCCCCeEeeeeceEEeCCCCcceeceeeecccccCchhHH------HHHHHhcCCCcc-eeecccccCCCCCCHH-----
Q 045577          265 AEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIIDEQTKMKGPFSAD-----  332 (392)
Q Consensus       265 ~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld~~~~~~~~~~~~-----  332 (392)
                      .++.+||+|||+++..... ........|++.|+| ||..      ...|+|+.|+++ +++.+..++......+     
T Consensus       130 ~~~~~kL~Dfg~~~~~~~~-~~~~~~~~gt~~y~a-PE~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~~~~~  207 (323)
T cd05595         130 KDGHIKITDFGLCKEGISD-GATMKTFCGTPEYLA-PEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELI  207 (323)
T ss_pred             CCCCEEecccHHhccccCC-CCccccccCCcCcCC-cccccCCCCCchhchhhhHHHHHHHHhCCCCCCCCCHHHHHHHH
Confidence            9999999999998753211 112223568999999 6654      468999999977 5555543332221111     


Q ss_pred             ----------HHHHHHHHHHhhcccCcCCCC-----CHHHHHH
Q 045577          333 ----------ELVKCIEVGLLCVQQRIEDWP-----TMSSVLT  360 (392)
Q Consensus       333 ----------~~~~~~~i~~~Cl~~dp~~RP-----sm~eVv~  360 (392)
                                ....+.+++..|++.||++||     ++.++++
T Consensus       208 ~~~~~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~l~  250 (323)
T cd05595         208 LMEEIRFPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVME  250 (323)
T ss_pred             hcCCCCCCCCCCHHHHHHHHHHccCCHHHhCCCCCCCHHHHHc
Confidence                      122445677799999999998     7777764

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in

>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2

Probab=99.81  E-value=2.5e-20  Score=179.86  Aligned_cols=170  Identities=21%  Similarity=0.266  Sum_probs=123.3

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEc
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLD  264 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~  264 (392)
                      |++.++.....+.++..+++|||++++++.....+... .....+..++.|++.||.|||+.+  +|+||||||+||+++
T Consensus        62 h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~~i~~~l~~lH~~~--~ivH~dlkp~Nil~~  138 (331)
T cd06649          62 SPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKEAKR-IPEEILGKVSIAVLRGLAYLREKH--QIMHRDVKPSNILVN  138 (331)
T ss_pred             CCCCCeEEEEEEECCEEEEEeecCCCCcHHHHHHHcCC-CCHHHHHHHHHHHHHHHHHHhhcC--CEEcCCCChhhEEEc
Confidence            44444444444446779999999999999775544332 344457889999999999999753  699999999999999


Q ss_pred             CCCCCeEeeeeceEEeCCCCcceeceeeecccccCchhHH------HHHHHhcCCCcc-eeecccccCCCCCC-------
Q 045577          265 AEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIIDEQTKMKGPFS-------  330 (392)
Q Consensus       265 ~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld~~~~~~~~~~-------  330 (392)
                      .++.+||+|||+++.....   ......|+..|+| ||..      .+.|+|+.|+++ +++.++.++.....       
T Consensus       139 ~~~~~kl~Dfg~~~~~~~~---~~~~~~g~~~y~a-PE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~  214 (331)
T cd06649         139 SRGEIKLCDFGVSGQLIDS---MANSFVGTRSYMS-PERLQGTHYSVQSDIWSMGLSLVELAIGRYPIPPPDAKELEAIF  214 (331)
T ss_pred             CCCcEEEccCccccccccc---ccccCCCCcCcCC-HhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHh
Confidence            9999999999998765321   1223568999999 7765      368999999876 44444332211000       


Q ss_pred             --------------------------------------------------------HHHHHHHHHHHHhhcccCcCCCCC
Q 045577          331 --------------------------------------------------------ADELVKCIEVGLLCVQQRIEDWPT  354 (392)
Q Consensus       331 --------------------------------------------------------~~~~~~~~~i~~~Cl~~dp~~RPs  354 (392)
                                                                              ......+.+++.+|++.||++||+
T Consensus       215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~~P~~Rpt  294 (331)
T cd06649         215 GRPVVDGEEGEPHSISPRPRPPGRPVSGHGMDSRPAMAIFELLDYIVNEPPPKLPNGVFTPDFQEFVNKCLIKNPAERAD  294 (331)
T ss_pred             cccccccccCCccccCcccccccccccccccccccchhHHHHHHHHHhCCCcCCCCccccHHHHHHHHHHccCCcccCCC
Confidence                                                                    001234667888999999999999


Q ss_pred             HHHHHHH
Q 045577          355 MSSVLTM  361 (392)
Q Consensus       355 m~eVv~~  361 (392)
                      +.++++.
T Consensus       295 ~~ell~h  301 (331)
T cd06649         295 LKMLMNH  301 (331)
T ss_pred             HHHHhcC
Confidence            9999865

Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst

>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

Probab=99.81  E-value=1.8e-20  Score=180.79  Aligned_cols=168  Identities=18%  Similarity=0.175  Sum_probs=124.3

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEc
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLD  264 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~  264 (392)
                      |++.++.......++..|++|||++++++......... .....+..++.|++.||.|||+.   +|+||||||+||+++
T Consensus        60 h~~iv~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~-l~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~  135 (333)
T cd05600          60 SEWLVKLLYAFQDDEYLYLAMEYVPGGDFRTLLNNLGV-LSEDHARFYMAEMFEAVDALHEL---GYIHRDLKPENFLID  135 (333)
T ss_pred             CCCCccEEEEEEcCCEEEEEEeCCCCCCHHHHHHHcCC-CCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEC
Confidence            34444443333345678999999999999876654332 33445778999999999999998   899999999999999


Q ss_pred             CCCCCeEeeeeceEEeCCCCcceeceeeecccccCchhHH------HHHHHhcCCCcc-eeecccccCCCCCCHH-----
Q 045577          265 AEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIIDEQTKMKGPFSAD-----  332 (392)
Q Consensus       265 ~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld~~~~~~~~~~~~-----  332 (392)
                      .++.+||+|||+++....    ......|++.|+| ||+.      .+.|+|+.|+++ +++.+..++......+     
T Consensus       136 ~~~~~kL~Dfg~a~~~~~----~~~~~~gt~~y~a-PE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~i  210 (333)
T cd05600         136 ASGHIKLTDFGLSKGIVT----YANSVVGSPDYMA-PEVLRGKGYDFTVDYWSLGCMLYEFLCGFPPFSGSTPNETWENL  210 (333)
T ss_pred             CCCCEEEEeCcCCccccc----ccCCcccCccccC-hhHhcCCCCCCccceecchHHHhhhhhCCCCCCCCCHHHHHHHH
Confidence            999999999999976432    2233578999999 7764      368999999876 5555544433221111     


Q ss_pred             ------------------HHHHHHHHHHhhcccCcCCCCCHHHHHHH
Q 045577          333 ------------------ELVKCIEVGLLCVQQRIEDWPTMSSVLTM  361 (392)
Q Consensus       333 ------------------~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~  361 (392)
                                        ....+.+++..|++.+|++||++.++++.
T Consensus       211 ~~~~~~~~~~~~~~~~~~~s~~~~~li~~~l~~~~~rr~s~~~ll~h  257 (333)
T cd05600         211 KYWKETLQRPVYDDPRFNLSDEAWDLITKLINDPSRRFGSLEDIKNH  257 (333)
T ss_pred             HhccccccCCCCCccccccCHHHHHHHHHHhhChhhhcCCHHHHHhC
Confidence                              12345667789999999999999999865

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.

>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase

Probab=99.81  E-value=3.1e-20  Score=172.17  Aligned_cols=164  Identities=23%  Similarity=0.277  Sum_probs=120.9

Q ss_pred             CCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEcCCCCCeEeeeec
Q 045577          197 GDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEINPNISDFGP  276 (392)
Q Consensus       197 ~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~~~~~~kl~DFGl  276 (392)
                      .+...+++|||++++++........ ...+..+.+++.|++.||.|||+.   +++||||||.||+++.++.+||+|||+
T Consensus        66 ~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~al~~lH~~---~i~H~dlkp~nill~~~~~~kl~Dfg~  141 (257)
T cd05116          66 EAESWMLVMELAELGPLNKFLQKNK-HVTEKNITELVHQVSMGMKYLEET---NFVHRDLAARNVLLVTQHYAKISDFGL  141 (257)
T ss_pred             cCCCcEEEEecCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHC---CEeecccchhhEEEcCCCeEEECCCcc
Confidence            3456799999999998876554433 234555789999999999999998   899999999999999999999999999


Q ss_pred             eEEeCCCCcce--eceeeecccccCchhHH------HHHHHhcCCCcc-eeec-ccccCCCC----------------CC
Q 045577          277 ARIFGDQTEEV--TGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIID-EQTKMKGP----------------FS  330 (392)
Q Consensus       277 a~~~~~~~~~~--~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld-~~~~~~~~----------------~~  330 (392)
                      ++.........  .....++..|+| ||..      ...|+|++|+++ +++. +..++...                .+
T Consensus       142 ~~~~~~~~~~~~~~~~~~~~~~y~a-PE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~i~~~~~~~~~  220 (257)
T cd05116         142 SKALGADENYYKAKTHGKWPVKWYA-PECMNYYKFSSKSDVWSFGVLMWEAFSYGQKPYKGMKGNEVTQMIESGERMECP  220 (257)
T ss_pred             ccccCCCCCeeeecCCCCCCccccC-HhHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHCCCCCCCC
Confidence            98765222111  111234578898 6654      268999999876 4543 43333211                11


Q ss_pred             HHHHHHHHHHHHhhcccCcCCCCCHHHHHHHHccC
Q 045577          331 ADELVKCIEVGLLCVQQRIEDWPTMSSVLTMLSNE  365 (392)
Q Consensus       331 ~~~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~L~~~  365 (392)
                      ......+.+++.+|++.+|++||++.+|++.|++.
T Consensus       221 ~~~~~~l~~li~~~~~~~p~~Rp~~~~i~~~l~~~  255 (257)
T cd05116         221 QRCPPEMYDLMKLCWTYGVDERPGFAVVELRLRNY  255 (257)
T ss_pred             CCCCHHHHHHHHHHhccCchhCcCHHHHHHHHhcc
Confidence            22234667788899999999999999999999863

Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio

>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=99.81  E-value=2.6e-20  Score=172.90  Aligned_cols=170  Identities=16%  Similarity=0.178  Sum_probs=121.9

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEc
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLD  264 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~  264 (392)
                      |+++++.......++..+++|||++++++............+..+.+++.|++.||.|||+.   +|+||||||+||+++
T Consensus        58 h~~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~iiH~dlkp~nili~  134 (258)
T cd05078          58 HKHLVLNYGVCVCGDESIMVQEYVKFGSLDTYLKKNKNLINISWKLEVAKQLAWALHFLEDK---GLTHGNVCAKNVLLI  134 (258)
T ss_pred             CCChhheeeEEEeCCCcEEEEecCCCCcHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCccceEEEe
Confidence            55666655554445778999999999998775543332334555788999999999999998   899999999999998


Q ss_pred             CCCC--------CeEeeeeceEEeCCCCcceeceeeecccccCchhHH-------HHHHHhcCCCcc-eeecccccCCCC
Q 045577          265 AEIN--------PNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELL-------QAWKLWSEGDPM-EIIDEQTKMKGP  328 (392)
Q Consensus       265 ~~~~--------~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~-------~~~diws~G~v~-~~ld~~~~~~~~  328 (392)
                      .++.        +|++|||++.....     .....++..|++ ||..       ...|+|+.|+++ +++.+.......
T Consensus       135 ~~~~~~~~~~~~~~l~d~g~~~~~~~-----~~~~~~~~~y~a-PE~~~~~~~~~~~~DiwslG~~l~~l~~g~~~~~~~  208 (258)
T cd05078         135 REEDRKTGNPPFIKLSDPGISITVLP-----KEILLERIPWVP-PECIENPQNLSLAADKWSFGTTLWEIFSGGDKPLSA  208 (258)
T ss_pred             cccccccCCCceEEecccccccccCC-----chhccccCCccC-chhccCCCCCCchhhHHHHHHHHHHHHcCCCCChhh
Confidence            7765        48888888764321     122457788999 6543       357999999876 444432111111


Q ss_pred             CCH---------------HHHHHHHHHHHhhcccCcCCCCCHHHHHHHHc
Q 045577          329 FSA---------------DELVKCIEVGLLCVQQRIEDWPTMSSVLTMLS  363 (392)
Q Consensus       329 ~~~---------------~~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~L~  363 (392)
                      ...               ....++.+++..|++.+|++||+++++++.|+
T Consensus       209 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~l~  258 (258)
T cd05078         209 LDSQKKLQFYEDRHQLPAPKWTELANLINQCMDYEPDFRPSFRAIIRDLN  258 (258)
T ss_pred             ccHHHHHHHHHccccCCCCCcHHHHHHHHHHhccChhhCCCHHHHHHhcC
Confidence            111               11235667888999999999999999999874

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity

>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases

Probab=99.81  E-value=3.4e-20  Score=178.70  Aligned_cols=170  Identities=15%  Similarity=0.062  Sum_probs=120.3

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEc
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLD  264 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~  264 (392)
                      |+++++...........|++|||++++++.....+... .....+..++.||+.||.|||+.   +|+||||||+||+++
T Consensus        55 ~p~i~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~-~~~~~~~~~~~qil~al~~LH~~---~ivHrDlkp~Nili~  130 (330)
T cd05586          55 SPFIVGLKFSFQTDSDLYLVTDYMSGGELFWHLQKEGR-FSEDRAKFYIAELVLALEHLHKY---DIVYRDLKPENILLD  130 (330)
T ss_pred             CCcCcceEEEEecCCeEEEEEcCCCCChHHHHHHhcCC-CCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeEEC
Confidence            34444443333345678999999999998765444332 34455788999999999999998   899999999999999


Q ss_pred             CCCCCeEeeeeceEEeCCCCcceeceeeecccccCchhHH-------HHHHHhcCCCcc-eeecccccCCCCCCHHH---
Q 045577          265 AEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELL-------QAWKLWSEGDPM-EIIDEQTKMKGPFSADE---  333 (392)
Q Consensus       265 ~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~-------~~~diws~G~v~-~~ld~~~~~~~~~~~~~---  333 (392)
                      .++.+||+|||+++..... ........||..|+| ||..       ...|+|+.|+++ +++.+..++......+.   
T Consensus       131 ~~~~~kl~Dfg~a~~~~~~-~~~~~~~~gt~~y~a-PE~~~~~~~~~~~~DvwslGvil~elltG~~Pf~~~~~~~~~~~  208 (330)
T cd05586         131 ATGHIALCDFGLSKANLTD-NKTTNTFCGTTEYLA-PEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFYAEDTQQMYRN  208 (330)
T ss_pred             CCCCEEEecCCcCcCCCCC-CCCccCccCCccccC-HHHHcCCCCCCCccceeccccEEEEeccCCCCCCCCCHHHHHHH
Confidence            9999999999998753321 112234579999999 7654       257999999976 56665444433221111   


Q ss_pred             -------------HHHHHHHHHhhcccCcCCCCC----HHHHHH
Q 045577          334 -------------LVKCIEVGLLCVQQRIEDWPT----MSSVLT  360 (392)
Q Consensus       334 -------------~~~~~~i~~~Cl~~dp~~RPs----m~eVv~  360 (392)
                                   ...+.+++..|++.+|++||+    +.++++
T Consensus       209 i~~~~~~~~~~~~~~~~~~li~~~L~~~P~~R~~~~~~~~~ll~  252 (330)
T cd05586         209 IAFGKVRFPKNVLSDEGRQFVKGLLNRNPQHRLGAHRDAVELKE  252 (330)
T ss_pred             HHcCCCCCCCccCCHHHHHHHHHHcCCCHHHCCCCCCCHHHHhc
Confidence                         123456778999999999984    555544

Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of

>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors

Probab=99.81  E-value=4.3e-20  Score=174.62  Aligned_cols=175  Identities=21%  Similarity=0.209  Sum_probs=124.6

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhc----------cccchhhhhHHHHHHHhhhhcCcCCCCceeec
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFEC----------SKYSSYVTNILYGIARVILYLPEDSRLEIIHR  254 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~----------~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHr  254 (392)
                      |+++++.......++..+++||++.++++.....+...          ......+..++.|++.||.|||+.   +++||
T Consensus        78 ~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~~---~i~H~  154 (296)
T cd05051          78 DPNIARLLGVCTVDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLESL---NFVHR  154 (296)
T ss_pred             CCCEeEEEEEEecCCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHHc---Ccccc
Confidence            44555544444445778999999999988775544321          124445788999999999999998   89999


Q ss_pred             ccccceeEEcCCCCCeEeeeeceEEeCCCC-cceeceeeecccccCchhHHH------HHHHhcCCCcce-eec--cccc
Q 045577          255 DHKTSNVLLDAEINPNISDFGPARIFGDQT-EEVTGRVIGTQTLKTVPELLQ------AWKLWSEGDPME-IID--EQTK  324 (392)
Q Consensus       255 DlKp~NIll~~~~~~kl~DFGla~~~~~~~-~~~~~~~~gt~~y~a~~~~~~------~~diws~G~v~~-~ld--~~~~  324 (392)
                      ||||+||+++.++.+||+|||+++...... ........++..|++ ||...      +.|+|+.|+++. ++.  +...
T Consensus       155 dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~a-PE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p  233 (296)
T cd05051         155 DLATRNCLVGKNYTIKIADFGMSRNLYSSDYYRVQGRAPLPIRWMA-WESVLLGKFTTKSDVWAFGVTLWEILTLCREQP  233 (296)
T ss_pred             ccchhceeecCCCceEEccccceeecccCcceeecCcCCCCceecC-HHHhhcCCCCccchhhhhHHHHHHHHhcCCCCC
Confidence            999999999999999999999998654221 122223456778999 66543      589999998763 332  1111


Q ss_pred             CCCCC-----------------------CHHHHHHHHHHHHhhcccCcCCCCCHHHHHHHHc
Q 045577          325 MKGPF-----------------------SADELVKCIEVGLLCVQQRIEDWPTMSSVLTMLS  363 (392)
Q Consensus       325 ~~~~~-----------------------~~~~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~L~  363 (392)
                      +....                       +......+.+++..|++.+|++||++.+|++.|+
T Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rpt~~el~~~L~  295 (296)
T cd05051         234 YEHLTDQQVIENAGHFFRDDGRQIYLPRPPNCPKDIYELMLECWRRDEEDRPTFREIHLFLQ  295 (296)
T ss_pred             CCCcChHHHHHHHHhccccccccccCCCccCCCHHHHHHHHHHhccChhcCCCHHHHHHHhc
Confidence            11100                       0111246788899999999999999999999986

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke

>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2

Probab=99.81  E-value=3.4e-20  Score=176.45  Aligned_cols=176  Identities=22%  Similarity=0.212  Sum_probs=124.1

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhcc---------------ccchhhhhHHHHHHHhhhhcCcCCCC
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECS---------------KYSSYVTNILYGIARVILYLPEDSRL  249 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~---------------~~~~~~~~i~~~ia~gL~yLH~~~~~  249 (392)
                      |++.++........+..|++|||++++++.....+....               .....+..++.|++.||.|||++   
T Consensus        80 h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~---  156 (304)
T cd05101          80 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQ---  156 (304)
T ss_pred             CCCchheeEEEecCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHHC---
Confidence            444444444333456789999999999987765442211               12233677899999999999998   


Q ss_pred             ceeecccccceeEEcCCCCCeEeeeeceEEeCCCCc-ceeceeeecccccCchhHH------HHHHHhcCCCcc-eeec-
Q 045577          250 EIIHRDHKTSNVLLDAEINPNISDFGPARIFGDQTE-EVTGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIID-  320 (392)
Q Consensus       250 ~iiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~~-~~~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld-  320 (392)
                      +++||||||+||+++.++.+||+|||+++.+..... .......+++.|+| ||..      ...|+|++|+++ +++. 
T Consensus       157 givH~dlkp~Nili~~~~~~kl~D~g~~~~~~~~~~~~~~~~~~~~~~y~a-PE~~~~~~~~~~~Di~slG~~l~el~~~  235 (304)
T cd05101         157 KCIHRDLAARNVLVTENNVMKIADFGLARDVNNIDYYKKTTNGRLPVKWMA-PEALFDRVYTHQSDVWSFGVLMWEIFTL  235 (304)
T ss_pred             CeeecccccceEEEcCCCcEEECCCccceecccccccccccCCCCCceeeC-chhhccCCCCchhhHHHHHHHHHHHHcC
Confidence            899999999999999999999999999987652221 11222345677999 6654      368999999876 3433 


Q ss_pred             ccccCCCCCCHH-----------------HHHHHHHHHHhhcccCcCCCCCHHHHHHHHccC
Q 045577          321 EQTKMKGPFSAD-----------------ELVKCIEVGLLCVQQRIEDWPTMSSVLTMLSNE  365 (392)
Q Consensus       321 ~~~~~~~~~~~~-----------------~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~L~~~  365 (392)
                      +...+.+ .+.+                 ....+.+++..|++.+|++||++.+|++.|+..
T Consensus       236 g~~p~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~e~l~~l~~~  296 (304)
T cd05101         236 GGSPYPG-IPVEELFKLLKEGHRMDKPANCTNELYMMMRDCWHAIPSHRPTFKQLVEDLDRI  296 (304)
T ss_pred             CCCCccc-CCHHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHH
Confidence            2222211 1111                 123566788899999999999999999999875

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>smart00108 B_lectin Bulb-type mannose-specific lectin

Probab=99.81  E-value=2e-19  Score=146.24  Aligned_cols=99  Identities=29%  Similarity=0.530  Sum_probs=82.1

Q ss_pred             CCCcEEecCCCeEEeeecCCCCCCceEEEEEEeCCCCceEEEecCCCCccc----cccCCCCC-------ceEEEecCCC
Q 045577           29 EVRDILLAPSTLWGGNSLIPGNSSQSFLVISYKNLPPLVIWVANRNGSINS----NLSQDNDL-------GIIWNVILPR   97 (392)
Q Consensus        29 ~~~~~l~s~~~~f~~gf~~~~~~~~~~~~i~~~~~~~~~vW~anr~~p~~~----~~~~~~~~-------~~~w~~~~~~   97 (392)
                      ..+++|+|+++.|++|||.... ...+.+|||+..+.++||+|||+.|+.+    .+..||+|       .++|++++..
T Consensus         5 ~~~~~l~s~~~~f~~G~~~~~~-q~dgnlV~~~~~~~~~vW~snt~~~~~~~~~l~l~~dGnLvl~~~~g~~vW~S~t~~   83 (114)
T smart00108        5 SSGQTLVSGNSLFELGFFTLIM-QNDYNLILYKSSSRTVVWVANRDNPVSDSCTLTLQSDGNLVLYDGDGRVVWSSNTTG   83 (114)
T ss_pred             CCCCEEecCCCcEeeeccccCC-CCCEEEEEEECCCCcEEEECCCCCCCCCCEEEEEeCCCCEEEEeCCCCEEEEecccC
Confidence            4578999999999999998864 4688899999865689999999999865    46678888       4799998753


Q ss_pred             CCCCceEEEecCCCeEEEeccCCCCCceEEeeecC
Q 045577           98 ATGSPALQLLVAGNLVLREFSLSHSEGYLWESFDS  132 (392)
Q Consensus        98 ~~~~~~~~l~d~Gnlvl~~~~~~~~~~~~Wqsfd~  132 (392)
                      ..+..+++|+|+|||||++..    +.++||||||
T Consensus        84 ~~~~~~~~L~ddGnlvl~~~~----~~~~W~Sf~~  114 (114)
T smart00108       84 ANGNYVLVLLDDGNLVIYDSD----GNFLWQSFDY  114 (114)
T ss_pred             CCCceEEEEeCCCCEEEECCC----CCEEeCCCCC
Confidence            445678999999999998654    5699999997

>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=99.81  E-value=2.8e-20  Score=195.28  Aligned_cols=177  Identities=21%  Similarity=0.202  Sum_probs=134.3

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhccc------cchhhhhHHHHHHHhhhhcCcCCCCceeeccccc
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSK------YSSYVTNILYGIARVILYLPEDSRLEIIHRDHKT  258 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~~------~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp  258 (392)
                      |++.++...+.-..+..++++|||++|||..++.+.+|..      ....++.++.|||+|+.||+++   +.|||||..
T Consensus       754 HpNiv~liGv~l~~~~~~i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~~---~fvHRDLAa  830 (1025)
T KOG1095|consen  754 HPNIVSLIGVCLDSGPPLILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLESK---HFVHRDLAA  830 (1025)
T ss_pred             CcceeeEEEeecCCCCcEEEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHhC---CCcCcchhh
Confidence            9999998887666788999999999999999877764433      3444799999999999999998   799999999


Q ss_pred             ceeEEcCCCCCeEeeeeceEEeCCCCcce-eceeeecccccCchhHHH------HHHHhcCCCcc-eeecccccCCC---
Q 045577          259 SNVLLDAEINPNISDFGPARIFGDQTEEV-TGRVIGTQTLKTVPELLQ------AWKLWSEGDPM-EIIDEQTKMKG---  327 (392)
Q Consensus       259 ~NIll~~~~~~kl~DFGla~~~~~~~~~~-~~~~~gt~~y~a~~~~~~------~~diws~G~v~-~~ld~~~~~~~---  327 (392)
                      +|+||++...+||+|||||+.+....-.. ..+..-...||+ ||...      +.|+|++|+++ |++.......+   
T Consensus       831 RNCLL~~~r~VKIaDFGlArDiy~~~yyr~~~~a~lPvkWm~-PEsl~d~iFtskSDvWsFGVllWEifslG~~PY~~~~  909 (1025)
T KOG1095|consen  831 RNCLLDERRVVKIADFGLARDIYDKDYYRKHGEAMLPVKWMP-PESLKDGIFTSKSDVWSFGVLLWEIFSLGATPYPSRS  909 (1025)
T ss_pred             hheeecccCcEEEcccchhHhhhhchheeccCccccceecCC-HHHHhhcccccccchhhhHHHHHHHHhCCCCCCCCcc
Confidence            99999999999999999999443211111 111223467999 77654      77999999876 33332111111   


Q ss_pred             --------------CCCHHHHHHHHHHHHhhcccCcCCCCCHHHHHHHHccC
Q 045577          328 --------------PFSADELVKCIEVGLLCVQQRIEDWPTMSSVLTMLSNE  365 (392)
Q Consensus       328 --------------~~~~~~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~L~~~  365 (392)
                                    +.+..+..++.+++..||+.+|++||++..+++.++..
T Consensus       910 n~~v~~~~~~ggRL~~P~~CP~~ly~lM~~CW~~~pe~RP~F~~i~~q~~~i  961 (1025)
T KOG1095|consen  910 NFEVLLDVLEGGRLDPPSYCPEKLYQLMLQCWKHDPEDRPSFRTIVEQDPAI  961 (1025)
T ss_pred             hHHHHHHHHhCCccCCCCCCChHHHHHHHHHccCChhhCccHHHHHhhhhhh
Confidence                          12233445778899999999999999999999987654

>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1

Probab=99.81  E-value=2e-20  Score=180.02  Aligned_cols=169  Identities=17%  Similarity=0.123  Sum_probs=120.2

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEc
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLD  264 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~  264 (392)
                      |++.++........+..|++|||++++++........+. ....+..++.|++.||.|||+.   +|+||||||+||+++
T Consensus        55 h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~-~~~~~~~~~~qi~~~L~~lH~~---giiHrDlkp~Nili~  130 (325)
T cd05602          55 HPFLVGLHFSFQTADKLYFVLDYINGGELFYHLQRERCF-LEPRARFYAAEIASALGYLHSL---NIVYRDLKPENILLD  130 (325)
T ss_pred             CCCCCceeEEEEcCCeEEEEEeCCCCCcHHHHHHhcCCC-CHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHeEEC
Confidence            333333333333356789999999999987755544333 3444677899999999999998   899999999999999


Q ss_pred             CCCCCeEeeeeceEEeCCCCcceeceeeecccccCchhHH------HHHHHhcCCCcc-eeecccccCCCCCCHH-----
Q 045577          265 AEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIIDEQTKMKGPFSAD-----  332 (392)
Q Consensus       265 ~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld~~~~~~~~~~~~-----  332 (392)
                      .++.+||+|||+++..... ........||+.|+| ||+.      .+.|+|+.|+++ +++.+.+.+......+     
T Consensus       131 ~~~~~kl~DfG~a~~~~~~-~~~~~~~~gt~~y~a-PE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i  208 (325)
T cd05602         131 SQGHIVLTDFGLCKENIEH-NGTTSTFCGTPEYLA-PEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNI  208 (325)
T ss_pred             CCCCEEEccCCCCcccccC-CCCcccccCCccccC-HHHHcCCCCCCccccccccHHHHHHhcCCCCCCCCCHHHHHHHH
Confidence            9999999999998754321 112334679999999 7765      367999999877 5555544433221111     


Q ss_pred             ----------HHHHHHHHHHhhcccCcCCCCCHHHHH
Q 045577          333 ----------ELVKCIEVGLLCVQQRIEDWPTMSSVL  359 (392)
Q Consensus       333 ----------~~~~~~~i~~~Cl~~dp~~RPsm~eVv  359 (392)
                                ....+.+++..|++.+|.+||++.+.+
T Consensus       209 ~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~  245 (325)
T cd05602         209 LNKPLQLKPNITNSARHLLEGLLQKDRTKRLGAKDDF  245 (325)
T ss_pred             HhCCcCCCCCCCHHHHHHHHHHcccCHHHCCCCCCCH
Confidence                      122445677799999999999876433

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt

>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

Probab=99.81  E-value=6.8e-20  Score=171.77  Aligned_cols=176  Identities=19%  Similarity=0.236  Sum_probs=126.3

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhc-------------cccchhhhhHHHHHHHhhhhcCcCCCCce
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFEC-------------SKYSSYVTNILYGIARVILYLPEDSRLEI  251 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~-------------~~~~~~~~~i~~~ia~gL~yLH~~~~~~i  251 (392)
                      |+++++.......++..+++|||++++++........+             ......+..++.|++.||.|||+.   ++
T Consensus        67 ~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~---~i  143 (280)
T cd05049          67 HENIVKFYGVCTEGDPPIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLASQ---HF  143 (280)
T ss_pred             CCCchheeeEEecCCCeEEEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhhC---Ce
Confidence            45555555555556779999999999998775544321             113444688999999999999998   89


Q ss_pred             eecccccceeEEcCCCCCeEeeeeceEEeCCCCc-ceeceeeecccccCchhHH------HHHHHhcCCCcc-eeec-cc
Q 045577          252 IHRDHKTSNVLLDAEINPNISDFGPARIFGDQTE-EVTGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIID-EQ  322 (392)
Q Consensus       252 iHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~~-~~~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld-~~  322 (392)
                      +||||||+||+++.++.+||+|||+++....... .......+++.|+| ||..      ...|+|+.|+++ +++. +.
T Consensus       144 ~h~dlkp~nili~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~a-PE~~~~~~~~~~~Di~slG~il~e~~~~g~  222 (280)
T cd05049         144 VHRDLATRNCLVGYDLVVKIGDFGMSRDVYTTDYYRVGGHTMLPIRWMP-PESIMYRKFTTESDVWSFGVVLWEIFTYGK  222 (280)
T ss_pred             eccccccceEEEcCCCeEEECCcccceecccCcceecCCCCcccceecC-hhhhccCCcchhhhHHHHHHHHHHHHhcCC
Confidence            9999999999999999999999999976532111 11122345678999 6654      368999999876 4553 43


Q ss_pred             ccCCCCCCH----------------HHHHHHHHHHHhhcccCcCCCCCHHHHHHHHcc
Q 045577          323 TKMKGPFSA----------------DELVKCIEVGLLCVQQRIEDWPTMSSVLTMLSN  364 (392)
Q Consensus       323 ~~~~~~~~~----------------~~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~L~~  364 (392)
                      ..+......                .....+.+++..|++.+|++||++.||++.|++
T Consensus       223 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~l~~  280 (280)
T cd05049         223 QPWYGLSNEEVIECITQGRLLQRPRTCPSEVYDIMLGCWKRDPQQRINIKDIHERLQK  280 (280)
T ss_pred             CCCCCCCHHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhhC
Confidence            332221111                112356678889999999999999999999863

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt

>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional

Probab=99.81  E-value=3.7e-20  Score=179.43  Aligned_cols=184  Identities=19%  Similarity=0.163  Sum_probs=134.1

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEc
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLD  264 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~  264 (392)
                      |+++++.......++..|++|||+.++++.....+... ..+..+..++.|++.||.|||+.   +|+||||||+|||++
T Consensus        90 hp~Iv~~~~~~~~~~~~~lv~Ey~~~g~L~~~i~~~~~-~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDLkp~NILl~  165 (340)
T PTZ00426         90 HPFCVNLYGSFKDESYLYLVLEFVIGGEFFTFLRRNKR-FPNDVGCFYAAQIVLIFEYLQSL---NIVYRDLKPENLLLD  165 (340)
T ss_pred             CCCCcceEEEEEeCCEEEEEEeCCCCCcHHHHHHHcCC-CCHHHHHHHHHHHHHHHHHHHHC---CeEccCCCHHHEEEC
Confidence            66777666555556779999999999998776554433 23444678999999999999998   899999999999999


Q ss_pred             CCCCCeEeeeeceEEeCCCCcceeceeeecccccCchhHH------HHHHHhcCCCcc-eeecccccCCCCCCHHH----
Q 045577          265 AEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIIDEQTKMKGPFSADE----  333 (392)
Q Consensus       265 ~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld~~~~~~~~~~~~~----  333 (392)
                      .++.+||+|||+++.....    .....||+.|+| ||+.      ...|+|+.|+++ +++.+.+++........    
T Consensus       166 ~~~~ikL~DFG~a~~~~~~----~~~~~gt~~y~a-PE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~~i  240 (340)
T PTZ00426        166 KDGFIKMTDFGFAKVVDTR----TYTLCGTPEYIA-PEILLNVGHGKAADWWTLGIFIYEILVGCPPFYANEPLLIYQKI  240 (340)
T ss_pred             CCCCEEEecCCCCeecCCC----cceecCChhhcC-HHHHhCCCCCccccccchhhHHHHHhcCCCCCCCCCHHHHHHHH
Confidence            9999999999999875421    223579999999 7765      367999999987 56666544433222111    


Q ss_pred             -----------HHHHHHHHHhhcccCcCCCC-----CHHHHHHH--HccC------CCCCCCCCCccc
Q 045577          334 -----------LVKCIEVGLLCVQQRIEDWP-----TMSSVLTM--LSNE------SIKVPQPEEVCF  377 (392)
Q Consensus       334 -----------~~~~~~i~~~Cl~~dp~~RP-----sm~eVv~~--L~~~------~~~~~~p~~p~~  377 (392)
                                 ...+.+++..|++.+|++|+     ++.++++.  +.+.      ...++.|..|.+
T Consensus       241 ~~~~~~~p~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~hp~f~~~~~~~~~~~~~~~~~~p~~  308 (340)
T PTZ00426        241 LEGIIYFPKFLDNNCKHLMKKLLSHDLTKRYGNLKKGAQNVKEHPWFGNIDWVSLLHKNVEVPYKPKY  308 (340)
T ss_pred             hcCCCCCCCCCCHHHHHHHHHHcccCHHHcCCCCCCCHHHHHcCCCcCCCCHHHHHhCCCCCCcCCCC
Confidence                       12445677899999999995     88888764  2221      234555666654

>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity

Probab=99.81  E-value=3.3e-20  Score=172.68  Aligned_cols=173  Identities=20%  Similarity=0.244  Sum_probs=121.8

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhh-hccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEE
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEF-ECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLL  263 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~-~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll  263 (392)
                      |+++++.....-..+..++++||++.+++....... ........+..|+.||++||.|||+.   +++|++|+++||++
T Consensus        60 h~ni~~~~g~~~~~~~~~lv~e~~~~g~L~~~L~~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~---~iiH~~l~~~nill  136 (259)
T PF07714_consen   60 HPNIVKLYGFCIENEPLFLVMEYCPGGSLDDYLKSKNKEPLSEQQRLSIAIQIAEALSYLHSN---NIIHGNLSPSNILL  136 (259)
T ss_dssp             BTTBE-EEEEEESSSSEEEEEE--TTEBHHHHHHHTCTTTSBHHHHHHHHHHHHHHHHHHHHT---TEEEST-SGGGEEE
T ss_pred             ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc---cccccccccccccc
Confidence            666666655443456799999999999988766554 33445566899999999999999998   89999999999999


Q ss_pred             cCCCCCeEeeeeceEEeCCC-CcceeceeeecccccCchhHH------HHHHHhcCCCcc-eeec-ccccCCCCCCHHH-
Q 045577          264 DAEINPNISDFGPARIFGDQ-TEEVTGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIID-EQTKMKGPFSADE-  333 (392)
Q Consensus       264 ~~~~~~kl~DFGla~~~~~~-~~~~~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld-~~~~~~~~~~~~~-  333 (392)
                      +.++.+||+|||++...... .............|+| ||..      .+.|+|++|.++ +++. +...+.. ....+ 
T Consensus       137 ~~~~~~Kl~~f~~~~~~~~~~~~~~~~~~~~~~~~~a-PE~~~~~~~~~ksDVysfG~~l~ei~~~~~~p~~~-~~~~~~  214 (259)
T PF07714_consen  137 DSNGQVKLSDFGLSRPISEKSKYKNDSSQQLPLRYLA-PEVLKDGEYTKKSDVYSFGMLLYEILTLGKFPFSD-YDNEEI  214 (259)
T ss_dssp             ETTTEEEEESTTTGEETTTSSSEEESTTSESGGGGS--HHHHHHSEESHHHHHHHHHHHHHHHHTTSSGTTTT-SCHHHH
T ss_pred             ccccccccccccccccccccccccccccccccccccc-ccccccccccccccccccccccccccccccccccc-cccccc
Confidence            99999999999999886321 1122222456778898 7765      478999999876 5555 2222221 12221 


Q ss_pred             ----------------HHHHHHHHHhhcccCcCCCCCHHHHHHHH
Q 045577          334 ----------------LVKCIEVGLLCVQQRIEDWPTMSSVLTML  362 (392)
Q Consensus       334 ----------------~~~~~~i~~~Cl~~dp~~RPsm~eVv~~L  362 (392)
                                      ...+.+++..||+.+|++||++.++++.|
T Consensus       215 ~~~~~~~~~~~~~~~~~~~~~~li~~C~~~~p~~RPs~~~i~~~L  259 (259)
T PF07714_consen  215 IEKLKQGQRLPIPDNCPKDIYSLIQQCWSHDPEKRPSFQEILQEL  259 (259)
T ss_dssp             HHHHHTTEETTSBTTSBHHHHHHHHHHT-SSGGGS--HHHHHHHH
T ss_pred             cccccccccceeccchhHHHHHHHHHHcCCChhhCcCHHHHHhcC
Confidence                            23566788899999999999999999986

Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....

>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase

Probab=99.81  E-value=2.7e-20  Score=179.00  Aligned_cols=170  Identities=19%  Similarity=0.153  Sum_probs=124.9

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEc
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLD  264 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~  264 (392)
                      |++.++.....+.++..|++|||++++++.....+.. ...+..+..++.|++.||.|||+.   +|+||||||+||+++
T Consensus        59 hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~  134 (323)
T cd05584          59 HPFIVDLIYAFQTGGKLYLILEYLSGGELFMHLEREG-IFMEDTACFYLSEISLALEHLHQQ---GIIYRDLKPENILLD  134 (323)
T ss_pred             CCchhceeeEEecCCeEEEEEeCCCCchHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEEC
Confidence            5666665555555678999999999999876554332 223444677889999999999998   899999999999999


Q ss_pred             CCCCCeEeeeeceEEeCCCCcceeceeeecccccCchhHH------HHHHHhcCCCcc-eeecccccCCCCCCHH-----
Q 045577          265 AEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIIDEQTKMKGPFSAD-----  332 (392)
Q Consensus       265 ~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld~~~~~~~~~~~~-----  332 (392)
                      .++.+||+|||+++...... .......|++.|+| ||..      .+.|+|+.|+++ +++.+..++.......     
T Consensus       135 ~~~~~kl~Dfg~~~~~~~~~-~~~~~~~gt~~y~a-PE~~~~~~~~~~~DiwslG~il~ell~G~~pf~~~~~~~~~~~~  212 (323)
T cd05584         135 AQGHVKLTDFGLCKESIHEG-TVTHTFCGTIEYMA-PEILMRSGHGKAVDWWSLGALMYDMLTGAPPFTAENRKKTIDKI  212 (323)
T ss_pred             CCCCEEEeeCcCCeecccCC-CcccccCCCccccC-hhhccCCCCCCcceecccHHHHHHHhcCCCCCCCCCHHHHHHHH
Confidence            99999999999987643221 12233578999999 7654      367999999876 5666654443322111     


Q ss_pred             ----------HHHHHHHHHHhhcccCcCCCC-----CHHHHHH
Q 045577          333 ----------ELVKCIEVGLLCVQQRIEDWP-----TMSSVLT  360 (392)
Q Consensus       333 ----------~~~~~~~i~~~Cl~~dp~~RP-----sm~eVv~  360 (392)
                                ....+.+++..|++.+|++||     ++.++++
T Consensus       213 ~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~l~~  255 (323)
T cd05584         213 LKGKLNLPPYLTPEARDLLKKLLKRNPSSRLGAGPGDAAEVQS  255 (323)
T ss_pred             HcCCCCCCCCCCHHHHHHHHHHcccCHhHcCCCCCCCHHHHhc
Confidence                      123456788899999999999     7777765

Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in

>PTZ00263 protein kinase A catalytic subunit; Provisional

Probab=99.81  E-value=2.3e-20  Score=180.01  Aligned_cols=167  Identities=18%  Similarity=0.132  Sum_probs=124.5

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEc
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLD  264 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~  264 (392)
                      |+++++.......++..|++|||+.++++.....+.. ......+..++.|++.||.|||+.   +|+||||||+||+++
T Consensus        77 hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~dlkp~NIll~  152 (329)
T PTZ00263         77 HPFIVNMMCSFQDENRVYFLLEFVVGGELFTHLRKAG-RFPNDVAKFYHAELVLAFEYLHSK---DIIYRDLKPENLLLD  152 (329)
T ss_pred             CCCCCcEEEEEEcCCEEEEEEcCCCCChHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHEEEC
Confidence            6666666555555678999999999999876554432 223444677899999999999998   899999999999999


Q ss_pred             CCCCCeEeeeeceEEeCCCCcceeceeeecccccCchhHH------HHHHHhcCCCcc-eeecccccCCCCCCHHH----
Q 045577          265 AEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIIDEQTKMKGPFSADE----  333 (392)
Q Consensus       265 ~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld~~~~~~~~~~~~~----  333 (392)
                      .++.+||+|||+++.....    .....|++.|+| ||+.      .+.|+|++|+++ +++.+..++.+....+.    
T Consensus       153 ~~~~~kl~Dfg~~~~~~~~----~~~~~gt~~y~a-PE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~i  227 (329)
T PTZ00263        153 NKGHVKVTDFGFAKKVPDR----TFTLCGTPEYLA-PEVIQSKGHGKAVDWWTMGVLLYEFIAGYPPFFDDTPFRIYEKI  227 (329)
T ss_pred             CCCCEEEeeccCceEcCCC----cceecCChhhcC-HHHHcCCCCCCcceeechHHHHHHHHcCCCCCCCCCHHHHHHHH
Confidence            9999999999999876422    123578999999 7765      367999999876 56655444433222111    


Q ss_pred             -----------HHHHHHHHHhhcccCcCCCCC-----HHHHHH
Q 045577          334 -----------LVKCIEVGLLCVQQRIEDWPT-----MSSVLT  360 (392)
Q Consensus       334 -----------~~~~~~i~~~Cl~~dp~~RPs-----m~eVv~  360 (392)
                                 ..++.+++..|++.||.+||+     +.++++
T Consensus       228 ~~~~~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~  270 (329)
T PTZ00263        228 LAGRLKFPNWFDGRARDLVKGLLQTDHTKRLGTLKGGVADVKN  270 (329)
T ss_pred             hcCCcCCCCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhc
Confidence                       124567888999999999996     677663

>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

Probab=99.81  E-value=3.2e-20  Score=175.70  Aligned_cols=168  Identities=18%  Similarity=0.142  Sum_probs=124.4

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEc
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLD  264 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~  264 (392)
                      |++.++.......++..|++|||++++++........ ......+..++.|++.||.|||+.   +++||||||+||+++
T Consensus        60 hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~NIli~  135 (291)
T cd05612          60 HPFIIRLFWTEHDQRFLYMLMEYVPGGELFSYLRNSG-RFSNSTGLFYASEIVCALEYLHSK---EIVYRDLKPENILLD  135 (291)
T ss_pred             CCcHhhhHhhhccCCeEEEEEeCCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHeEEC
Confidence            5666666555555667899999999999876554332 223444678999999999999998   899999999999999


Q ss_pred             CCCCCeEeeeeceEEeCCCCcceeceeeecccccCchhHH------HHHHHhcCCCcc-eeecccccCCCCCCHH-----
Q 045577          265 AEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIIDEQTKMKGPFSAD-----  332 (392)
Q Consensus       265 ~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld~~~~~~~~~~~~-----  332 (392)
                      .++.+||+|||+++.....    .....|++.|+| ||+.      .+.|+|+.|+++ +++.+...+.+....+     
T Consensus       136 ~~~~~kl~Dfg~~~~~~~~----~~~~~gt~~y~a-PE~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~i  210 (291)
T cd05612         136 KEGHIKLTDFGFAKKLRDR----TWTLCGTPEYLA-PEVIQSKGHNKAVDWWALGILIYEMLVGYPPFFDDNPFGIYEKI  210 (291)
T ss_pred             CCCCEEEEecCcchhccCC----cccccCChhhcC-HHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH
Confidence            9999999999998765321    123568999999 7765      367999999876 5555544443322111     


Q ss_pred             ----------HHHHHHHHHHhhcccCcCCCCC-----HHHHHHH
Q 045577          333 ----------ELVKCIEVGLLCVQQRIEDWPT-----MSSVLTM  361 (392)
Q Consensus       333 ----------~~~~~~~i~~~Cl~~dp~~RPs-----m~eVv~~  361 (392)
                                ....+.+++..|++.||.+||+     +.++++.
T Consensus       211 ~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h  254 (291)
T cd05612         211 LAGKLEFPRHLDLYAKDLIKKLLVVDRTRRLGNMKNGADDVKNH  254 (291)
T ss_pred             HhCCcCCCccCCHHHHHHHHHHcCCCHHHccCCccCCHHHHhcC
Confidence                      1224567888999999999995     7777654

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt

>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases

Probab=99.81  E-value=2.5e-20  Score=173.63  Aligned_cols=167  Identities=24%  Similarity=0.305  Sum_probs=121.8

Q ss_pred             cCCCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEcCCCCCeEeee
Q 045577          195 DCGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEINPNISDF  274 (392)
Q Consensus       195 ~C~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~~~~~~kl~DF  274 (392)
                      ...++..+++|||++++++...............+.+++.|++.||.|||+.   +++|+||||+||+++.++.+||+||
T Consensus        74 ~~~~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~---~i~H~di~p~nili~~~~~~~l~df  150 (266)
T cd05033          74 VTKSRPVMIITEYMENGSLDKFLRENDGKFTVGQLVGMLRGIASGMKYLSEM---NYVHRDLAARNILVNSNLVCKVSDF  150 (266)
T ss_pred             EecCCceEEEEEcCCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCcceEEEcCCCCEEECcc
Confidence            3445678999999999988776544333334555789999999999999998   8999999999999999999999999


Q ss_pred             eceEEeCC-CCcceeceeeecccccCchhHH------HHHHHhcCCCcc-eeec-ccccCCC----------------CC
Q 045577          275 GPARIFGD-QTEEVTGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIID-EQTKMKG----------------PF  329 (392)
Q Consensus       275 Gla~~~~~-~~~~~~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld-~~~~~~~----------------~~  329 (392)
                      |+++.... ..........++..|++ ||..      ...|+|+.|+++ +++. +..++..                +.
T Consensus       151 g~~~~~~~~~~~~~~~~~~~~~~y~~-Pe~~~~~~~~~~~Dv~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~  229 (266)
T cd05033         151 GLSRRLEDSEATYTTKGGKIPIRWTA-PEAIAYRKFTSASDVWSFGIVMWEVMSYGERPYWDMSNQDVIKAVEDGYRLPP  229 (266)
T ss_pred             chhhcccccccceeccCCCCCccccC-hhhhccCCCccccchHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHcCCCCCC
Confidence            99987642 11112222334567888 6544      367999999876 3333 3222211                11


Q ss_pred             CHHHHHHHHHHHHhhcccCcCCCCCHHHHHHHHccC
Q 045577          330 SADELVKCIEVGLLCVQQRIEDWPTMSSVLTMLSNE  365 (392)
Q Consensus       330 ~~~~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~L~~~  365 (392)
                      +......+.+++.+|++.+|++||++.+|++.|+..
T Consensus       230 ~~~~~~~l~~li~~cl~~~p~~Rp~~~ei~~~l~~~  265 (266)
T cd05033         230 PMDCPSALYQLMLDCWQKDRNERPTFSQIVSTLDKM  265 (266)
T ss_pred             CCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence            112234667888999999999999999999999764

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment

>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2

Probab=99.81  E-value=4.3e-20  Score=173.58  Aligned_cols=176  Identities=19%  Similarity=0.201  Sum_probs=123.2

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhh---------------ccccchhhhhHHHHHHHhhhhcCcCCCC
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFE---------------CSKYSSYVTNILYGIARVILYLPEDSRL  249 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~---------------~~~~~~~~~~i~~~ia~gL~yLH~~~~~  249 (392)
                      |++.++.....+..+..++++||+.++++........               .......+.+++.|++.||.|||+.   
T Consensus        67 h~~iv~~~~~~~~~~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~~---  143 (283)
T cd05091          67 HPNIVCLLGVVTKEQPLSMIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSSH---  143 (283)
T ss_pred             CCCcCeEEEEEcCCCceEEEEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHc---
Confidence            4555555554455567899999999888766443210               1123334678899999999999998   


Q ss_pred             ceeecccccceeEEcCCCCCeEeeeeceEEeCCCC-cceeceeeecccccCchhHHH------HHHHhcCCCcc-eeec-
Q 045577          250 EIIHRDHKTSNVLLDAEINPNISDFGPARIFGDQT-EEVTGRVIGTQTLKTVPELLQ------AWKLWSEGDPM-EIID-  320 (392)
Q Consensus       250 ~iiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~-~~~~~~~~gt~~y~a~~~~~~------~~diws~G~v~-~~ld-  320 (392)
                      +++||||||+||++++++.+||+|||+++...... ........+++.|+| ||...      ..|+|+.|+++ +++. 
T Consensus       144 gi~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~a-PE~~~~~~~~~~~Dv~slG~~l~el~~~  222 (283)
T cd05091         144 HVVHKDLATRNVLVFDKLNVKISDLGLFREVYAADYYKLMGNSLLPIRWMS-PEAIMYGKFSIDSDIWSYGVVLWEVFSY  222 (283)
T ss_pred             CccccccchhheEecCCCceEecccccccccccchheeeccCccCCccccC-HHHHhcCCCCcchhHHHHHHHHHHHHcC
Confidence            89999999999999999999999999988654211 111223445678999 66542      67999999876 4454 


Q ss_pred             ccccCCCCCCH----------------HHHHHHHHHHHhhcccCcCCCCCHHHHHHHHcc
Q 045577          321 EQTKMKGPFSA----------------DELVKCIEVGLLCVQQRIEDWPTMSSVLTMLSN  364 (392)
Q Consensus       321 ~~~~~~~~~~~----------------~~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~L~~  364 (392)
                      +...+.+....                .....+.+++..|++.+|++||++.+|++.|+.
T Consensus       223 g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~cl~~~p~~RP~~~~i~~~l~~  282 (283)
T cd05091         223 GLQPYCGYSNQDVIEMIRNRQVLPCPDDCPAWVYTLMLECWNEFPSRRPRFKDIHSRLRT  282 (283)
T ss_pred             CCCCCCCCCHHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHhhC
Confidence            32222221111                122235678889999999999999999999864

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants

Probab=99.81  E-value=3.7e-20  Score=178.54  Aligned_cols=157  Identities=22%  Similarity=0.310  Sum_probs=114.3

Q ss_pred             CCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEcCCCCCeEeeeeceE
Q 045577          199 GEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEINPNISDFGPAR  278 (392)
Q Consensus       199 ~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~~~~~~kl~DFGla~  278 (392)
                      ...|++|||+. +++.....+... ..+..+..++.|+++||.|||+.   +|+||||||+||+++.++.+||+|||+++
T Consensus        77 ~~~~lv~e~~~-~~L~~~l~~~~~-~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIll~~~~~~kL~Dfg~~~  151 (338)
T cd07859          77 KDIYVVFELME-SDLHQVIKANDD-LTPEHHQFFLYQLLRALKYIHTA---NVFHRDLKPKNILANADCKLKICDFGLAR  151 (338)
T ss_pred             ceEEEEEecCC-CCHHHHHHhccc-CCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCcEEEccCcccc
Confidence            35899999997 455444333222 34455788999999999999998   89999999999999999999999999998


Q ss_pred             EeCCC--CcceeceeeecccccCchhHHH--------HHHHhcCCCcc-eeecccccCCCCCCHH---------------
Q 045577          279 IFGDQ--TEEVTGRVIGTQTLKTVPELLQ--------AWKLWSEGDPM-EIIDEQTKMKGPFSAD---------------  332 (392)
Q Consensus       279 ~~~~~--~~~~~~~~~gt~~y~a~~~~~~--------~~diws~G~v~-~~ld~~~~~~~~~~~~---------------  332 (392)
                      .....  .........|++.|+| ||+..        +.|+|+.|+++ +++.+++.+.+.....               
T Consensus       152 ~~~~~~~~~~~~~~~~~t~~y~a-PE~~~~~~~~~~~~~DvwSlGvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~  230 (338)
T cd07859         152 VAFNDTPTAIFWTDYVATRWYRA-PELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLITDLLGTPSPE  230 (338)
T ss_pred             ccccccCccccccCCCCCCCcCC-HHHHhccccccCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCCHH
Confidence            65321  1112233578999999 77642        57999999976 5665544443221100               


Q ss_pred             -------------------------------HHHHHHHHHHhhcccCcCCCCCHHHHHHH
Q 045577          333 -------------------------------ELVKCIEVGLLCVQQRIEDWPTMSSVLTM  361 (392)
Q Consensus       333 -------------------------------~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~  361 (392)
                                                     ....+.+++..|++.+|++||+++++++.
T Consensus       231 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~e~l~h  290 (338)
T cd07859         231 TISRVRNEKARRYLSSMRKKQPVPFSQKFPNADPLALRLLERLLAFDPKDRPTAEEALAD  290 (338)
T ss_pred             HHHHhhhhhHHHHHHhhcccCCCchHHhcCCCChHHHHHHHHHcCcCcccCCCHHHHhcC
Confidence                                           01234578889999999999999999865

Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos

>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors

Probab=99.81  E-value=4.8e-20  Score=174.18  Aligned_cols=177  Identities=19%  Similarity=0.201  Sum_probs=124.3

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhh---------------ccccchhhhhHHHHHHHhhhhcCcCCCC
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFE---------------CSKYSSYVTNILYGIARVILYLPEDSRL  249 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~---------------~~~~~~~~~~i~~~ia~gL~yLH~~~~~  249 (392)
                      |++-++.......++..+++|||+.++++.....+..               -......+++++.|++.||.|||+.   
T Consensus        75 h~~i~~~~~~~~~~~~~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~---  151 (293)
T cd05053          75 HKNIINLLGVCTQEGPLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLASK---  151 (293)
T ss_pred             CCCeeeEEEEEcCCCCeEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHC---
Confidence            3333443333344567899999999998876543321               0113444688999999999999998   


Q ss_pred             ceeecccccceeEEcCCCCCeEeeeeceEEeCCCCc-ceeceeeecccccCchhHH------HHHHHhcCCCcc-eeec-
Q 045577          250 EIIHRDHKTSNVLLDAEINPNISDFGPARIFGDQTE-EVTGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIID-  320 (392)
Q Consensus       250 ~iiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~~-~~~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld-  320 (392)
                      +++||||||+||+++.++.+||+|||+++.+..... .......++..|++ ||..      .+.|+|+.|+++ +++. 
T Consensus       152 ~ivH~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~a-PE~~~~~~~~~~~Di~slG~il~el~~~  230 (293)
T cd05053         152 KCIHRDLAARNVLVTEDHVMKIADFGLARDIHHIDYYRKTTNGRLPVKWMA-PEALFDRVYTHQSDVWSFGVLLWEIFTL  230 (293)
T ss_pred             CccccccceeeEEEcCCCeEEeCccccccccccccceeccCCCCCCccccC-HHHhccCCcCcccceeehhhHHHHHhcC
Confidence            899999999999999999999999999986542211 11122234567888 6654      257999999987 4443 


Q ss_pred             ccccCCCC----------------CCHHHHHHHHHHHHhhcccCcCCCCCHHHHHHHHccC
Q 045577          321 EQTKMKGP----------------FSADELVKCIEVGLLCVQQRIEDWPTMSSVLTMLSNE  365 (392)
Q Consensus       321 ~~~~~~~~----------------~~~~~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~L~~~  365 (392)
                      +...+...                .+......+.+++.+|++.+|++|||+.++++.|++.
T Consensus       231 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~eil~~l~~~  291 (293)
T cd05053         231 GGSPYPGIPVEELFKLLKEGYRMEKPQNCTQELYHLMRDCWHEVPSQRPTFKQLVEDLDRM  291 (293)
T ss_pred             CCCCCCCCCHHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHHHHh
Confidence            32222111                1112234677889999999999999999999999865

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,

>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1

Probab=99.81  E-value=4.9e-20  Score=173.34  Aligned_cols=176  Identities=20%  Similarity=0.216  Sum_probs=124.9

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhh----------------ccccchhhhhHHHHHHHhhhhcCcCCC
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFE----------------CSKYSSYVTNILYGIARVILYLPEDSR  248 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~----------------~~~~~~~~~~i~~~ia~gL~yLH~~~~  248 (392)
                      |+++++.....+.....|++|||++++++........                ....+..++.++.|++.||.|||+.  
T Consensus        66 h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~--  143 (283)
T cd05090          66 HPNIVCLLGVVTQEQPVCMLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSSH--  143 (283)
T ss_pred             CCCeeeEEEEEecCCceEEEEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHhc--
Confidence            5555555555455567899999999998876543221                1123444678999999999999998  


Q ss_pred             CceeecccccceeEEcCCCCCeEeeeeceEEeCCCC-cceeceeeecccccCchhHH------HHHHHhcCCCcc-eeec
Q 045577          249 LEIIHRDHKTSNVLLDAEINPNISDFGPARIFGDQT-EEVTGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIID  320 (392)
Q Consensus       249 ~~iiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~-~~~~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld  320 (392)
                       +++||||||+||+++.++.+||+|||+++...... ........++..|++ ||..      ...|+|+.|+++ +++.
T Consensus       144 -~i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~a-PE~~~~~~~~~~~Dv~slG~il~el~~  221 (283)
T cd05090         144 -FFVHKDLAARNILIGEQLHVKISDLGLSREIYSADYYRVQPKSLLPIRWMP-PEAIMYGKFSSDSDIWSFGVVLWEIFS  221 (283)
T ss_pred             -CeehhccccceEEEcCCCcEEeccccccccccCCcceecccCCCccceecC-hHHhccCCCCchhhhHHHHHHHHHHHc
Confidence             89999999999999999999999999998654211 111222345667888 6654      368999999876 4444


Q ss_pred             -ccccCCCCCCH----------------HHHHHHHHHHHhhcccCcCCCCCHHHHHHHHcc
Q 045577          321 -EQTKMKGPFSA----------------DELVKCIEVGLLCVQQRIEDWPTMSSVLTMLSN  364 (392)
Q Consensus       321 -~~~~~~~~~~~----------------~~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~L~~  364 (392)
                       +..++.+....                ....++.+++.+|++.+|++||++.+|.+.|.+
T Consensus       222 ~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~~  282 (283)
T cd05090         222 FGLQPYYGFSNQEVIEMVRKRQLLPCSEDCPPRMYSLMTECWQEGPSRRPRFKDIHTRLRS  282 (283)
T ss_pred             CCCCCCCCCCHHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHhhc
Confidence             32222221111                112356678889999999999999999999864

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3

Probab=99.81  E-value=2.3e-20  Score=179.53  Aligned_cols=168  Identities=15%  Similarity=0.085  Sum_probs=121.7

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEc
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLD  264 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~  264 (392)
                      |++.++.......++..|++|||++++++.....+.. ...+..+..++.||+.||.|||+.   +|+||||||+||+++
T Consensus        55 hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~al~~lH~~---givH~Dlkp~NIll~  130 (325)
T cd05604          55 HPFLVGLHYSFQTTEKLYFVLDFVNGGELFFHLQRER-SFPEPRARFYAAEIASALGYLHSI---NIVYRDLKPENILLD  130 (325)
T ss_pred             CCCCccEEEEEecCCEEEEEEcCCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHeEEC
Confidence            4555555444444577999999999999876554433 234455788999999999999998   899999999999999


Q ss_pred             CCCCCeEeeeeceEEeCCCCcceeceeeecccccCchhHHH------HHHHhcCCCcc-eeecccccCCCCCCHHH----
Q 045577          265 AEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELLQ------AWKLWSEGDPM-EIIDEQTKMKGPFSADE----  333 (392)
Q Consensus       265 ~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~~------~~diws~G~v~-~~ld~~~~~~~~~~~~~----  333 (392)
                      .++.+||+|||+++..... ........|++.|+| ||...      +.|+|+.|+++ +++.+..++......+.    
T Consensus       131 ~~~~~kL~DfG~~~~~~~~-~~~~~~~~gt~~y~a-PE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~~~~~~  208 (325)
T cd05604         131 SQGHVVLTDFGLCKEGIAQ-SDTTTTFCGTPEYLA-PEVIRKQPYDNTVDWWCLGAVLYEMLYGLPPFYCRDVAEMYDNI  208 (325)
T ss_pred             CCCCEEEeecCCcccCCCC-CCCcccccCChhhCC-HHHHcCCCCCCcCccccccceehhhhcCCCCCCCCCHHHHHHHH
Confidence            9999999999998753211 112234678999999 77653      57999999987 56655444433221111    


Q ss_pred             -----------HHHHHHHHHhhcccCcCCCCCHHHH
Q 045577          334 -----------LVKCIEVGLLCVQQRIEDWPTMSSV  358 (392)
Q Consensus       334 -----------~~~~~~i~~~Cl~~dp~~RPsm~eV  358 (392)
                                 ...+.+++..|++.+|.+||++.+.
T Consensus       209 ~~~~~~~~~~~~~~~~~ll~~ll~~~p~~R~~~~~~  244 (325)
T cd05604         209 LHKPLVLRPGASLTAWSILEELLEKDRQRRLGAKED  244 (325)
T ss_pred             HcCCccCCCCCCHHHHHHHHHHhccCHHhcCCCCCC
Confidence                       1234567889999999999988643

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,

>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon

Probab=99.81  E-value=3.4e-20  Score=178.09  Aligned_cols=158  Identities=19%  Similarity=0.188  Sum_probs=117.8

Q ss_pred             CCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEcCCCCCeEeeeece
Q 045577          198 DGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEINPNISDFGPA  277 (392)
Q Consensus       198 ~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~~~~~~kl~DFGla  277 (392)
                      ++..|+||||++++++.....+.. ...+..+..++.|++.||.|||+.   +|+||||||+||+++.++.+||+|||++
T Consensus        68 ~~~~~lv~E~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDikp~Nill~~~~~~kL~Dfg~~  143 (321)
T cd05591          68 KDRLFFVMEYVNGGDLMFQIQRSR-KFDEPRSRFYAAEVTLALMFLHRH---GVIYRDLKLDNILLDAEGHCKLADFGMC  143 (321)
T ss_pred             CCeEEEEEeCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHeEECCCCCEEEeecccc
Confidence            467899999999999876543332 233444678999999999999998   8999999999999999999999999998


Q ss_pred             EEeCCCCcceeceeeecccccCchhHHH------HHHHhcCCCcc-eeecccccCCCCCCHHH---------------HH
Q 045577          278 RIFGDQTEEVTGRVIGTQTLKTVPELLQ------AWKLWSEGDPM-EIIDEQTKMKGPFSADE---------------LV  335 (392)
Q Consensus       278 ~~~~~~~~~~~~~~~gt~~y~a~~~~~~------~~diws~G~v~-~~ld~~~~~~~~~~~~~---------------~~  335 (392)
                      +...... .......|++.|+| ||...      +.|+|+.|+++ +++.++.++......+.               ..
T Consensus       144 ~~~~~~~-~~~~~~~gt~~y~a-PE~~~~~~~~~~~DvwslG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~  221 (321)
T cd05591         144 KEGILNG-VTTTTFCGTPDYIA-PEILQELEYGPSVDWWALGVLMYEMMAGQPPFEADNEDDLFESILHDDVLYPVWLSK  221 (321)
T ss_pred             eecccCC-ccccccccCccccC-HHHHcCCCCCCccceechhHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCCCCCCCH
Confidence            7643211 22234578999999 77653      57999999876 56666544433322111               13


Q ss_pred             HHHHHHHhhcccCcCCCC-------CHHHHHHH
Q 045577          336 KCIEVGLLCVQQRIEDWP-------TMSSVLTM  361 (392)
Q Consensus       336 ~~~~i~~~Cl~~dp~~RP-------sm~eVv~~  361 (392)
                      .+.+++..|++.+|++||       ++.++++.
T Consensus       222 ~~~~ll~~~L~~dp~~R~~~~~~~~~~~~~~~h  254 (321)
T cd05591         222 EAVSILKAFMTKNPNKRLGCVASQGGEDAIKQH  254 (321)
T ss_pred             HHHHHHHHHhccCHHHcCCCCCCCCCHHHHhcC
Confidence            456788899999999999       77777643

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to

>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta

Probab=99.81  E-value=2.6e-20  Score=178.59  Aligned_cols=156  Identities=20%  Similarity=0.165  Sum_probs=115.8

Q ss_pred             CCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEcCCCCCeEeeeece
Q 045577          198 DGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEINPNISDFGPA  277 (392)
Q Consensus       198 ~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~~~~~~kl~DFGla  277 (392)
                      ++..|+||||++++++.....+... .....+..++.|++.||.|||+.   +|+||||||+||+++.++.+||+|||++
T Consensus        68 ~~~~~lv~E~~~~g~L~~~i~~~~~-~~~~~~~~~~~qi~~~l~~lH~~---~ivHrDlkp~Nil~~~~~~~kl~Dfg~~  143 (316)
T cd05620          68 KEHLFFVMEFLNGGDLMFHIQDKGR-FDLYRATFYAAEIVCGLQFLHSK---GIIYRDLKLDNVMLDRDGHIKIADFGMC  143 (316)
T ss_pred             CCEEEEEECCCCCCcHHHHHHHcCC-CCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHeEECCCCCEEeCccCCC
Confidence            4678999999999998765544322 23445778899999999999998   8999999999999999999999999998


Q ss_pred             EEeCCCCcceeceeeecccccCchhHHH------HHHHhcCCCcc-eeecccccCCCCCCHHH---------------HH
Q 045577          278 RIFGDQTEEVTGRVIGTQTLKTVPELLQ------AWKLWSEGDPM-EIIDEQTKMKGPFSADE---------------LV  335 (392)
Q Consensus       278 ~~~~~~~~~~~~~~~gt~~y~a~~~~~~------~~diws~G~v~-~~ld~~~~~~~~~~~~~---------------~~  335 (392)
                      +..... ........||+.|+| ||+..      +.|+|+.|+++ +++.+..++.+....+.               ..
T Consensus       144 ~~~~~~-~~~~~~~~gt~~y~a-PE~~~~~~~~~~~DiwslGvil~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~  221 (316)
T cd05620         144 KENVFG-DNRASTFCGTPDYIA-PEILQGLKYTFSVDWWSFGVLLYEMLIGQSPFHGDDEDELFESIRVDTPHYPRWITK  221 (316)
T ss_pred             eecccC-CCceeccCCCcCccC-HHHHcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCCCCCH
Confidence            753211 112234678999999 77653      67999999876 56655444433221111               12


Q ss_pred             HHHHHHHhhcccCcCCCCCHH-HHH
Q 045577          336 KCIEVGLLCVQQRIEDWPTMS-SVL  359 (392)
Q Consensus       336 ~~~~i~~~Cl~~dp~~RPsm~-eVv  359 (392)
                      .+.+++..|++.||++||++. ++.
T Consensus       222 ~~~~li~~~l~~dP~~R~~~~~~~~  246 (316)
T cd05620         222 ESKDILEKLFERDPTRRLGVVGNIR  246 (316)
T ss_pred             HHHHHHHHHccCCHHHcCCChHHHH
Confidence            455677899999999999984 555

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I

>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]

Probab=99.81  E-value=2.7e-20  Score=164.39  Aligned_cols=168  Identities=18%  Similarity=0.150  Sum_probs=124.8

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEc
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLD  264 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~  264 (392)
                      |+..+|....--+.+-.|+|+|+|.++++...+.++. ...++.+-.++.||+.+|.|+|.+   +|+|||+||.|+++.
T Consensus        69 HP~IvrL~~ti~~~~~~ylvFe~m~G~dl~~eIV~R~-~ySEa~aSH~~rQiLeal~yCH~n---~IvHRDvkP~nllLA  144 (355)
T KOG0033|consen   69 HPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVARE-FYSEADASHCIQQILEALAYCHSN---GIVHRDLKPENLLLA  144 (355)
T ss_pred             CCcEeehhhhhcccceeEEEEecccchHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhc---CceeccCChhheeee
Confidence            8999998877666788999999999999977655442 123344677899999999999999   999999999999995


Q ss_pred             C---CCCCeEeeeeceEEeCCCCcceeceeeecccccCchhHHH------HHHHhcCCCcceeecc-cccCCCCCCHHH-
Q 045577          265 A---EINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELLQ------AWKLWSEGDPMEIIDE-QTKMKGPFSADE-  333 (392)
Q Consensus       265 ~---~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~~------~~diws~G~v~~~ld~-~~~~~~~~~~~~-  333 (392)
                      .   ...+|++|||+|..++  .........|||+||+ ||+..      ..|+|+.|.++.++-. .+++-++..... 
T Consensus       145 SK~~~A~vKL~~FGvAi~l~--~g~~~~G~~GtP~fma-PEvvrkdpy~kpvDiW~cGViLfiLL~G~~PF~~~~~~rly  221 (355)
T KOG0033|consen  145 SKAKGAAVKLADFGLAIEVN--DGEAWHGFAGTPGYLS-PEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLY  221 (355)
T ss_pred             eccCCCceeecccceEEEeC--CccccccccCCCcccC-HHHhhcCCCCCcchhhhhhHHHHHHHhCCCCCCCccHHHHH
Confidence            3   3457999999999886  3333444789999999 88774      6799999998865433 223322111111 


Q ss_pred             ------------------HHHHHHHHHhhcccCcCCCCCHHHHH
Q 045577          334 ------------------LVKCIEVGLLCVQQRIEDWPTMSSVL  359 (392)
Q Consensus       334 ------------------~~~~~~i~~~Cl~~dp~~RPsm~eVv  359 (392)
                                        .+...+++.+|+..||.+|-|+.|.+
T Consensus       222 e~I~~g~yd~~~~~w~~is~~Ak~LvrrML~~dP~kRIta~EAL  265 (355)
T KOG0033|consen  222 EQIKAGAYDYPSPEWDTVTPEAKSLIRRMLTVNPKKRITADEAL  265 (355)
T ss_pred             HHHhccccCCCCcccCcCCHHHHHHHHHHhccChhhhccHHHHh
Confidence                              12334566688999999998887654

>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2

Probab=99.81  E-value=2.7e-20  Score=178.70  Aligned_cols=166  Identities=17%  Similarity=0.152  Sum_probs=121.6

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEc
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLD  264 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~  264 (392)
                      |+++++........+..|++|||++++++.....+..+. ....+..++.||+.||.|||+.   +|+||||||+||+++
T Consensus        55 h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~-~~~~~~~~~~qi~~~L~~lH~~---~ivH~Dlkp~NIll~  130 (321)
T cd05603          55 HPFLVGLHYSFQTAEKLYFVLDYVNGGELFFHLQRERCF-LEPRARFYAAEVASAIGYLHSL---NIIYRDLKPENILLD  130 (321)
T ss_pred             CCCccceeeEEEcCCEEEEEEcCCCCCCHHHHHHHcCCC-CHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeEEC
Confidence            566666555445567799999999999987655444333 3444677899999999999998   899999999999999


Q ss_pred             CCCCCeEeeeeceEEeCCCCcceeceeeecccccCchhHHH------HHHHhcCCCcc-eeecccccCCCCCCH------
Q 045577          265 AEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELLQ------AWKLWSEGDPM-EIIDEQTKMKGPFSA------  331 (392)
Q Consensus       265 ~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~~------~~diws~G~v~-~~ld~~~~~~~~~~~------  331 (392)
                      .++.+||+|||+++..... ........|++.|+| ||...      +.|+|+.|+++ +++.+..++......      
T Consensus       131 ~~~~~kl~Dfg~~~~~~~~-~~~~~~~~gt~~y~a-PE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i  208 (321)
T cd05603         131 SQGHVVLTDFGLCKEGVEP-EETTSTFCGTPEYLA-PEVLRKEPYDRTVDWWCLGAVLYEMLYGLPPFYSRDVSQMYDNI  208 (321)
T ss_pred             CCCCEEEccCCCCccCCCC-CCccccccCCcccCC-HHHhcCCCCCCcCcccccchhhhhhhcCCCCCCCCCHHHHHHHH
Confidence            9999999999998753221 122334678999999 77642      57999999976 566664444332111      


Q ss_pred             ---------HHHHHHHHHHHhhcccCcCCCCCHH
Q 045577          332 ---------DELVKCIEVGLLCVQQRIEDWPTMS  356 (392)
Q Consensus       332 ---------~~~~~~~~i~~~Cl~~dp~~RPsm~  356 (392)
                               .....+.+++..|++.+|.+||+..
T Consensus       209 ~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~  242 (321)
T cd05603         209 LHKPLQLPGGKTVAACDLLVGLLHKDQRRRLGAK  242 (321)
T ss_pred             hcCCCCCCCCCCHHHHHHHHHHccCCHhhcCCCC
Confidence                     1122456788899999999999753

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.

>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor

Probab=99.81  E-value=7.6e-20  Score=175.12  Aligned_cols=163  Identities=21%  Similarity=0.312  Sum_probs=119.9

Q ss_pred             CCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEcCCCCCeEeeeece
Q 045577          198 DGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEINPNISDFGPA  277 (392)
Q Consensus       198 ~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~~~~~~kl~DFGla  277 (392)
                      .+..++++||+.+|++.....+.........+++++.|++.||.|||+.   +|+||||||+||+++.++.+||+|||++
T Consensus        80 ~~~~~~v~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH~~---~iiH~dlkp~Nill~~~~~~kl~DfG~a  156 (316)
T cd05108          80 TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEER---RLVHRDLAARNVLVKTPQHVKITDFGLA  156 (316)
T ss_pred             CCCceeeeecCCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHhc---CeeccccchhheEecCCCcEEEcccccc
Confidence            4567899999999988775544333344555788999999999999998   8999999999999999999999999999


Q ss_pred             EEeCCCCcc-eeceeeecccccCchhHH------HHHHHhcCCCcc-eeec-ccccCCCCCCHHH---------------
Q 045577          278 RIFGDQTEE-VTGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIID-EQTKMKGPFSADE---------------  333 (392)
Q Consensus       278 ~~~~~~~~~-~~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld-~~~~~~~~~~~~~---------------  333 (392)
                      +.+...... ......++..|++ ||..      ...|+|++|+++ +++. +...+.+ .+..+               
T Consensus       157 ~~~~~~~~~~~~~~~~~~~~y~a-pE~~~~~~~~~~~Di~slGv~l~el~t~g~~p~~~-~~~~~~~~~~~~~~~~~~~~  234 (316)
T cd05108         157 KLLGADEKEYHAEGGKVPIKWMA-LESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDG-IPASEISSILEKGERLPQPP  234 (316)
T ss_pred             ccccCCCcceeccCCccceeecC-hHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCC-CCHHHHHHHHhCCCCCCCCC
Confidence            876522221 1122234567998 6654      367999999876 4443 3222222 11111               


Q ss_pred             --HHHHHHHHHhhcccCcCCCCCHHHHHHHHccC
Q 045577          334 --LVKCIEVGLLCVQQRIEDWPTMSSVLTMLSNE  365 (392)
Q Consensus       334 --~~~~~~i~~~Cl~~dp~~RPsm~eVv~~L~~~  365 (392)
                        ...+.+++..|++.+|++||++.+++..|...
T Consensus       235 ~~~~~~~~li~~cl~~~p~~Rps~~~l~~~l~~~  268 (316)
T cd05108         235 ICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKM  268 (316)
T ss_pred             CCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence              23566788899999999999999999998754

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor

>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota

Probab=99.81  E-value=1.9e-20  Score=180.59  Aligned_cols=164  Identities=20%  Similarity=0.151  Sum_probs=118.8

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEc
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLD  264 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~  264 (392)
                      |++.++........+..|++|||++++++.....+... .....+..++.|++.||.|||+.   +|+||||||+||+++
T Consensus        55 hp~iv~~~~~~~~~~~~~lv~E~~~~~~L~~~~~~~~~-l~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dikp~Nili~  130 (329)
T cd05618          55 HPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRK-LPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLD  130 (329)
T ss_pred             CCcCCceeeEEEeCCEEEEEEeCCCCCCHHHHHHHcCC-CCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEEC
Confidence            45555554444445678999999999998765443332 34455788999999999999998   899999999999999


Q ss_pred             CCCCCeEeeeeceEEeCCCCcceeceeeecccccCchhHH------HHHHHhcCCCcc-eeecccccCCC--------C-
Q 045577          265 AEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIIDEQTKMKG--------P-  328 (392)
Q Consensus       265 ~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld~~~~~~~--------~-  328 (392)
                      .++.+||+|||+++..... ........||+.|+| ||+.      .+.|+|+.|+++ +++.+..++..        . 
T Consensus       131 ~~~~~kL~DfG~~~~~~~~-~~~~~~~~gt~~y~a-PE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~~  208 (329)
T cd05618         131 SEGHIKLTDYGMCKEGLRP-GDTTSTFCGTPNYIA-PEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQN  208 (329)
T ss_pred             CCCCEEEeeCCccccccCC-CCccccccCCccccC-HHHHcCCCCCCccceecccHHHHHHhhCCCCCccCCCcCCcccc
Confidence            9999999999998753211 112234678999999 7765      368999999876 55555433310        0 


Q ss_pred             ---------------CCHHHHHHHHHHHHhhcccCcCCCCC
Q 045577          329 ---------------FSADELVKCIEVGLLCVQQRIEDWPT  354 (392)
Q Consensus       329 ---------------~~~~~~~~~~~i~~~Cl~~dp~~RPs  354 (392)
                                     .+......+.+++..|++.||++||+
T Consensus       209 ~~~~~~~~i~~~~~~~p~~~~~~~~~ll~~~L~~dP~~R~~  249 (329)
T cd05618         209 TEDYLFQVILEKQIRIPRSLSVKAASVLKSFLNKDPKERLG  249 (329)
T ss_pred             cHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHhcCCHHHcCC
Confidence                           01111234557888999999999998

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o

>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

Probab=99.81  E-value=4.4e-20  Score=179.04  Aligned_cols=171  Identities=16%  Similarity=0.171  Sum_probs=125.7

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEc
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLD  264 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~  264 (392)
                      |++.++.......++..|+||||++++++....++.. ......+..++.|++.||.|||+.   +++||||||+||+++
T Consensus        60 ~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~l~~~~~~~i~~qi~~aL~~LH~~---giiH~Dlkp~NIll~  135 (350)
T cd05573          60 SPWIVKLYYSFQDEEHLYLVMEYMPGGDLMNLLIRKD-VFPEETARFYIAELVLALDSVHKL---GFIHRDIKPDNILID  135 (350)
T ss_pred             CCCccchhhheecCCeEEEEEcCCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHeEEC
Confidence            4555555444444567899999999999887666542 234455788999999999999997   899999999999999


Q ss_pred             CCCCCeEeeeeceEEeCCCC----------------------------cceeceeeecccccCchhHH------HHHHHh
Q 045577          265 AEINPNISDFGPARIFGDQT----------------------------EEVTGRVIGTQTLKTVPELL------QAWKLW  310 (392)
Q Consensus       265 ~~~~~kl~DFGla~~~~~~~----------------------------~~~~~~~~gt~~y~a~~~~~------~~~diw  310 (392)
                      .++.+||+|||+++......                            ........||+.|+| ||+.      ...|+|
T Consensus       136 ~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~a-PE~~~~~~~~~~~Diw  214 (350)
T cd05573         136 ADGHIKLADFGLCKKMNKAKDREYYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIA-PEVLRGTPYGLECDWW  214 (350)
T ss_pred             CCCCEEeecCCCCccCcccCcccccccccccccccccccccccccccccccccccccCccccC-HHHHcCCCCCCceeeE
Confidence            99999999999998654222                            112233578999999 7765      367999


Q ss_pred             cCCCcc-eeecccccCCCCCCHHH-------------------HHHHHHHHHhhcccCcCCCCC-HHHHHHH
Q 045577          311 SEGDPM-EIIDEQTKMKGPFSADE-------------------LVKCIEVGLLCVQQRIEDWPT-MSSVLTM  361 (392)
Q Consensus       311 s~G~v~-~~ld~~~~~~~~~~~~~-------------------~~~~~~i~~~Cl~~dp~~RPs-m~eVv~~  361 (392)
                      +.|+++ +++.+..++......+.                   ...+.+++..|++ +|++||+ +.++++.
T Consensus       215 SlG~il~ell~g~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~~~~~~li~~ll~-dp~~R~~s~~~ll~h  285 (350)
T cd05573         215 SLGVILYEMLYGFPPFYSDTLQETYNKIINWKESLRFPPDPPVSPEAIDLICRLLC-DPEDRLGSFEEIKSH  285 (350)
T ss_pred             ecchhhhhhccCCCCCCCCCHHHHHHHHhccCCcccCCCCCCCCHHHHHHHHHHcc-ChhhcCCCHHHHhcC
Confidence            999986 56555444332221111                   2345567778997 9999999 9999875

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the

>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein

Probab=99.81  E-value=3.4e-20  Score=175.16  Aligned_cols=177  Identities=21%  Similarity=0.236  Sum_probs=125.6

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhc-----------------------cccchhhhhHHHHHHHhhh
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFEC-----------------------SKYSSYVTNILYGIARVIL  241 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~-----------------------~~~~~~~~~i~~~ia~gL~  241 (392)
                      |++.++.......++..++++||+.++++.........                       ......++.++.|++.||.
T Consensus        62 h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~  141 (290)
T cd05045          62 HPHVIKLYGACSQDGPLLLIVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQ  141 (290)
T ss_pred             CCCEeeEEEEEecCCCcEEEEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHH
Confidence            55555554444445678999999999988765432111                       1133446889999999999


Q ss_pred             hcCcCCCCceeecccccceeEEcCCCCCeEeeeeceEEeCCCCc-ceeceeeecccccCchhH------HHHHHHhcCCC
Q 045577          242 YLPEDSRLEIIHRDHKTSNVLLDAEINPNISDFGPARIFGDQTE-EVTGRVIGTQTLKTVPEL------LQAWKLWSEGD  314 (392)
Q Consensus       242 yLH~~~~~~iiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~~-~~~~~~~gt~~y~a~~~~------~~~~diws~G~  314 (392)
                      |||+.   +++||||||+||++++++.+||+|||+++....... .......++..|++ ||.      ....|+|++|+
T Consensus       142 ~LH~~---~ivH~dikp~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~a-pE~~~~~~~~~~~Di~slG~  217 (290)
T cd05045         142 YLAEM---KLVHRDLAARNVLVAEGRKMKISDFGLSRDVYEEDSYVKRSKGRIPVKWMA-IESLFDHIYTTQSDVWSFGV  217 (290)
T ss_pred             HHHHC---CeehhhhhhheEEEcCCCcEEeccccccccccCccchhcccCCCCCccccC-HHHHccCCcchHhHHHHHHH
Confidence            99988   899999999999999999999999999876532211 11122345667888 664      34679999998


Q ss_pred             cc-eeec-ccccCCCCC----------------CHHHHHHHHHHHHhhcccCcCCCCCHHHHHHHHccC
Q 045577          315 PM-EIID-EQTKMKGPF----------------SADELVKCIEVGLLCVQQRIEDWPTMSSVLTMLSNE  365 (392)
Q Consensus       315 v~-~~ld-~~~~~~~~~----------------~~~~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~L~~~  365 (392)
                      ++ +++. +...+.+..                +......+.+++..|++.+|++||++.++++.|++.
T Consensus       218 ~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~cl~~~P~~Rp~~~~i~~~l~~~  286 (290)
T cd05045         218 LLWEIVTLGGNPYPGIAPERLFNLLKTGYRMERPENCSEEMYNLMLTCWKQEPDKRPTFADISKELEKM  286 (290)
T ss_pred             HHHHHHhcCCCCCCCCCHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHHccCCcccCCCHHHHHHHHHHH
Confidence            76 5554 422222211                111223667888999999999999999999999875

Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi

>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=99.81  E-value=5.7e-20  Score=172.47  Aligned_cols=170  Identities=15%  Similarity=0.131  Sum_probs=120.3

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEc
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLD  264 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~  264 (392)
                      |++.++.......++..++||||++++++.....+.........+.+++.|+++||.|||+.   +|+||||||+||+++
T Consensus        75 h~niv~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~iiH~dlkp~Nill~  151 (274)
T cd05076          75 HIHLAFVHGVCVRGSENIMVEEFVEHGPLDVCLRKEKGRVPVAWKITVAQQLASALSYLEDK---NLVHGNVCAKNILLA  151 (274)
T ss_pred             CCCeeeEEEEEEeCCceEEEEecCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcC---CccCCCCCcccEEEe
Confidence            45555554443345678999999999998765544333335556789999999999999998   899999999999997


Q ss_pred             CCC-------CCeEeeeeceEEeCCCCcceeceeeecccccCchhHH-------HHHHHhcCCCcc-ee-ecccccCCCC
Q 045577          265 AEI-------NPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELL-------QAWKLWSEGDPM-EI-IDEQTKMKGP  328 (392)
Q Consensus       265 ~~~-------~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~-------~~~diws~G~v~-~~-ld~~~~~~~~  328 (392)
                      ..+       .+|++|||++......     ....++..|++ ||..       ...|+|+.|+++ ++ +.+..++...
T Consensus       152 ~~~~~~~~~~~~kl~d~g~~~~~~~~-----~~~~~~~~~~a-Pe~~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~  225 (274)
T cd05076         152 RLGLAEGTSPFIKLSDPGVSFTALSR-----EERVERIPWIA-PECVPGGNSLSTAADKWSFGTTLLEICFDGEVPLKER  225 (274)
T ss_pred             ccCcccCccceeeecCCccccccccc-----cccccCCcccC-chhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCcccc
Confidence            643       3799999987643211     11346777888 5533       368999999865 44 2333333221


Q ss_pred             CCH--------------HHHHHHHHHHHhhcccCcCCCCCHHHHHHHHc
Q 045577          329 FSA--------------DELVKCIEVGLLCVQQRIEDWPTMSSVLTMLS  363 (392)
Q Consensus       329 ~~~--------------~~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~L~  363 (392)
                      ...              .....+.+++..|++.+|++||++.+|++.|+
T Consensus       226 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~il~~L~  274 (274)
T cd05076         226 TPSEKERFYEKKHRLPEPSCKELATLISQCLTYEPTQRPSFRTILRDLT  274 (274)
T ss_pred             ChHHHHHHHHhccCCCCCCChHHHHHHHHHcccChhhCcCHHHHHHhhC
Confidence            111              11135677888999999999999999999874

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt

>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase

Probab=99.80  E-value=3.8e-20  Score=177.90  Aligned_cols=166  Identities=17%  Similarity=0.103  Sum_probs=119.3

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEc
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLD  264 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~  264 (392)
                      |++.++........+..|++|||++++++.....+... ..+..+..++.||+.||.|||+.   +|+||||||+||+++
T Consensus        55 hp~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~-~~~~~~~~~~~qi~~~l~~lH~~---givH~dikp~NIll~  130 (323)
T cd05575          55 HPFLVGLHYSFQTADKLYFVLDYVNGGELFFHLQRERS-FPEPRARFYAAEIASALGYLHSL---NIIYRDLKPENILLD  130 (323)
T ss_pred             CCCCCCeeEEEEeCCEEEEEEcCCCCCCHHHHHHhcCC-CCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCCHHHeEEC
Confidence            44444443333335678999999999998765544332 34444678899999999999998   899999999999999


Q ss_pred             CCCCCeEeeeeceEEeCCCCcceeceeeecccccCchhHH------HHHHHhcCCCcc-eeecccccCCCCCCHH-----
Q 045577          265 AEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIIDEQTKMKGPFSAD-----  332 (392)
Q Consensus       265 ~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld~~~~~~~~~~~~-----  332 (392)
                      .++.+||+|||+++..... ........||+.|+| ||..      .+.|+|++|+++ +++.+..++......+     
T Consensus       131 ~~~~~kl~Dfg~~~~~~~~-~~~~~~~~gt~~y~a-PE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~i  208 (323)
T cd05575         131 SQGHVVLTDFGLCKEGIEH-SKTTSTFCGTPEYLA-PEVLRKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRDTAEMYDNI  208 (323)
T ss_pred             CCCcEEEeccCCCcccccC-CCccccccCChhhcC-hhhhcCCCCCccccccccchhhhhhhcCCCCCCCCCHHHHHHHH
Confidence            9999999999998753221 122334578999999 7754      357999999976 5555544433221111     


Q ss_pred             ----------HHHHHHHHHHhhcccCcCCCCCHH
Q 045577          333 ----------ELVKCIEVGLLCVQQRIEDWPTMS  356 (392)
Q Consensus       333 ----------~~~~~~~i~~~Cl~~dp~~RPsm~  356 (392)
                                ....+.+++..|++.+|++||++.
T Consensus       209 ~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~  242 (323)
T cd05575         209 LNKPLRLKPNISVSARHLLEGLLQKDRTKRLGAK  242 (323)
T ss_pred             HcCCCCCCCCCCHHHHHHHHHHhhcCHHhCCCCC
Confidence                      123456788899999999999874

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr

>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes

Probab=99.80  E-value=3.5e-20  Score=171.14  Aligned_cols=162  Identities=20%  Similarity=0.176  Sum_probs=116.1

Q ss_pred             CCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEcCCCCCeEeeeece
Q 045577          198 DGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEINPNISDFGPA  277 (392)
Q Consensus       198 ~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~~~~~~kl~DFGla  277 (392)
                      .+..|++|||++++++.....+......+..+..++.|++.||.|||+.   +++|+||||+||+++.++.+||+|||++
T Consensus        65 ~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dl~p~nil~~~~~~~kl~dfg~~  141 (252)
T cd05084          65 KQPIYIVMELVQGGDFLTFLRTEGPRLKVKELIQMVENAAAGMEYLESK---HCIHRDLAARNCLVTEKNVLKISDFGMS  141 (252)
T ss_pred             CCCeEEEEeeccCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhC---CccccccchheEEEcCCCcEEECccccC
Confidence            4568999999999988775544332334555788999999999999998   8999999999999999999999999998


Q ss_pred             EEeCCCCccee-ceeeecccccCchhHH------HHHHHhcCCCcce-eec-ccccCCC----------------CCCHH
Q 045577          278 RIFGDQTEEVT-GRVIGTQTLKTVPELL------QAWKLWSEGDPME-IID-EQTKMKG----------------PFSAD  332 (392)
Q Consensus       278 ~~~~~~~~~~~-~~~~gt~~y~a~~~~~------~~~diws~G~v~~-~ld-~~~~~~~----------------~~~~~  332 (392)
                      ........... .....+..|+| ||..      ...|+|+.|+++. ++. +...+..                ..+..
T Consensus       142 ~~~~~~~~~~~~~~~~~~~~y~a-PE~~~~~~~~~~~Dv~slG~il~e~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~  220 (252)
T cd05084         142 REEEDGVYASTGGMKQIPVKWTA-PEALNYGRYSSESDVWSFGILLWEAFSLGAVPYANLSNQQTREAIEQGVRLPCPEL  220 (252)
T ss_pred             cccccccccccCCCCCCceeecC-chhhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccCHHHHHHHHHcCCCCCCccc
Confidence            75432111110 11122456888 6643      3679999998773 443 2221111                11111


Q ss_pred             HHHHHHHHHHhhcccCcCCCCCHHHHHHHHc
Q 045577          333 ELVKCIEVGLLCVQQRIEDWPTMSSVLTMLS  363 (392)
Q Consensus       333 ~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~L~  363 (392)
                      ....+.+++.+|++.+|++||++.+|.++|+
T Consensus       221 ~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~  251 (252)
T cd05084         221 CPDAVYRLMERCWEYDPGQRPSFSTVHQELQ  251 (252)
T ss_pred             CCHHHHHHHHHHcCCChhhCcCHHHHHHHHh
Confidence            2345677888999999999999999999986

Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular

>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

Probab=99.80  E-value=8.3e-20  Score=170.88  Aligned_cols=175  Identities=18%  Similarity=0.237  Sum_probs=123.8

Q ss_pred             CCccccccCcCCCCCeeEEecCccCCCcChhhhhhh---------ccccchhhhhHHHHHHHhhhhcCcCCCCceeeccc
Q 045577          186 GGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFE---------CSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDH  256 (392)
Q Consensus       186 ~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~---------~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDl  256 (392)
                      ++-++.....+.++..|++|||++++++........         ....+..+..++.|++.||.|||+.   +++||||
T Consensus        69 ~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~di  145 (277)
T cd05032          69 HHVVRLLGVVSTGQPTLVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAAK---KFVHRDL  145 (277)
T ss_pred             CceeEEEEEEcCCCCcEEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHhC---Ccccccc
Confidence            333333344444567899999999998876543221         1123445788999999999999998   8999999


Q ss_pred             ccceeEEcCCCCCeEeeeeceEEeCCCC-cceeceeeecccccCchhHH------HHHHHhcCCCcc-eeec-ccccCCC
Q 045577          257 KTSNVLLDAEINPNISDFGPARIFGDQT-EEVTGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIID-EQTKMKG  327 (392)
Q Consensus       257 Kp~NIll~~~~~~kl~DFGla~~~~~~~-~~~~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld-~~~~~~~  327 (392)
                      ||+||+++.++.+||+|||+++...... ........++..|+| ||..      ...|+|++|+++ +++. +...+..
T Consensus       146 ~p~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~a-PE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~  224 (277)
T cd05032         146 AARNCMVAEDLTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMA-PESLKDGVFTTKSDVWSFGVVLWEMATLAEQPYQG  224 (277)
T ss_pred             ChheEEEcCCCCEEECCcccchhhccCcccccCCCCCccccccC-HHHHhcCCCCcccchHHHHHHHHHhhccCCCCCcc
Confidence            9999999999999999999987654221 112222446778999 6654      257999999877 4443 3222211


Q ss_pred             C----------------CCHHHHHHHHHHHHhhcccCcCCCCCHHHHHHHHcc
Q 045577          328 P----------------FSADELVKCIEVGLLCVQQRIEDWPTMSSVLTMLSN  364 (392)
Q Consensus       328 ~----------------~~~~~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~L~~  364 (392)
                      .                .+......+.+++..|++.+|++|||+.++++.|++
T Consensus       225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~  277 (277)
T cd05032         225 LSNEEVLKFVIDGGHLDLPENCPDKLLELMRMCWQYNPKMRPTFLEIVSSLKD  277 (277)
T ss_pred             CCHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHcCCChhhCCCHHHHHHHhcC
Confidence            1                111223466788889999999999999999999863

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological

>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors

Probab=99.80  E-value=6.5e-20  Score=171.03  Aligned_cols=177  Identities=19%  Similarity=0.230  Sum_probs=126.5

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEc
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLD  264 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~  264 (392)
                      |++.++.....+.++..|++|||++++++.....+.........+..++.|++.||.|||+.   +++||||||+||+++
T Consensus        64 h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~h~dlkp~nili~  140 (267)
T cd05066          64 HPNIIHLEGVVTKSKPVMIVTEYMENGSLDAFLRKHDGQFTVIQLVGMLRGIASGMKYLSDM---GYVHRDLAARNILVN  140 (267)
T ss_pred             CCCcceEEEEEecCCccEEEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CEeehhhchhcEEEC
Confidence            55555555444556778999999999988776544332234455788999999999999998   899999999999999


Q ss_pred             CCCCCeEeeeeceEEeCCCCccee--ceeeecccccCchhHHH------HHHHhcCCCcce-eec-ccccCCCCCC----
Q 045577          265 AEINPNISDFGPARIFGDQTEEVT--GRVIGTQTLKTVPELLQ------AWKLWSEGDPME-IID-EQTKMKGPFS----  330 (392)
Q Consensus       265 ~~~~~kl~DFGla~~~~~~~~~~~--~~~~gt~~y~a~~~~~~------~~diws~G~v~~-~ld-~~~~~~~~~~----  330 (392)
                      .++.+|++|||+++.+........  ....++..|++ ||...      ..|+|+.|+++. ++. +..++.....    
T Consensus       141 ~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~~-pe~~~~~~~~~~~Dv~slG~~l~ell~~g~~p~~~~~~~~~~  219 (267)
T cd05066         141 SNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTA-PEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWEMSNQDVI  219 (267)
T ss_pred             CCCeEEeCCCCcccccccccceeeecCCCccceeecC-HhHhccCccCchhhhHHHHHHHHHHhcCCCCCcccCCHHHHH
Confidence            999999999999987653222111  11223456888 66543      689999998763 343 4322211111    


Q ss_pred             ------------HHHHHHHHHHHHhhcccCcCCCCCHHHHHHHHccC
Q 045577          331 ------------ADELVKCIEVGLLCVQQRIEDWPTMSSVLTMLSNE  365 (392)
Q Consensus       331 ------------~~~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~L~~~  365 (392)
                                  ......+.+++.+|++.+|++||+|.++++.|+..
T Consensus       220 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~  266 (267)
T cd05066         220 KAIEEGYRLPAPMDCPAALHQLMLDCWQKDRNERPKFEQIVSILDKL  266 (267)
T ss_pred             HHHhCCCcCCCCCCCCHHHHHHHHHHcccCchhCCCHHHHHHHHHhh
Confidence                        11123567788899999999999999999999753

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul

>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase

Probab=99.80  E-value=3.1e-20  Score=182.01  Aligned_cols=171  Identities=16%  Similarity=0.166  Sum_probs=123.6

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEc
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLD  264 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~  264 (392)
                      |+++++.......+...|++|||++++++.......  ......+..++.|++.||.|||+.   +|+||||||+|||++
T Consensus       102 h~~iv~~~~~~~~~~~~~lv~Ey~~gg~L~~~l~~~--~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDLkp~NILl~  176 (370)
T cd05596         102 SEWIVQLHYAFQDDKYLYMVMEYMPGGDLVNLMSNY--DIPEKWARFYTAEVVLALDAIHSM---GFIHRDVKPDNMLLD  176 (370)
T ss_pred             CCCcceEEEEEecCCEEEEEEcCCCCCcHHHHHHhc--CCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEEc
Confidence            444444433333345689999999999997755432  234455777899999999999998   899999999999999


Q ss_pred             CCCCCeEeeeeceEEeCCCCcceeceeeecccccCchhHH----------HHHHHhcCCCcc-eeecccccCCCCCCH--
Q 045577          265 AEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELL----------QAWKLWSEGDPM-EIIDEQTKMKGPFSA--  331 (392)
Q Consensus       265 ~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~----------~~~diws~G~v~-~~ld~~~~~~~~~~~--  331 (392)
                      .++.+||+|||+++..............||+.|+| ||+.          .+.|+|+.|+++ +++.+..++.+....  
T Consensus       177 ~~~~~kL~DfG~~~~~~~~~~~~~~~~~gt~~y~a-PE~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~  255 (370)
T cd05596         177 KSGHLKLADFGTCMKMDANGMVRCDTAVGTPDYIS-PEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGT  255 (370)
T ss_pred             CCCCEEEEeccceeeccCCCcccCCCCCCCcCeEC-HHHhccCCCCCCCCCceeeeehhHHHHHHHhCCCCcCCCCHHHH
Confidence            99999999999998764322222234579999999 7754          357999999876 555554443322111  


Q ss_pred             -----------------HHHHHHHHHHHhhcccCcCC--CCCHHHHHHH
Q 045577          332 -----------------DELVKCIEVGLLCVQQRIED--WPTMSSVLTM  361 (392)
Q Consensus       332 -----------------~~~~~~~~i~~~Cl~~dp~~--RPsm~eVv~~  361 (392)
                                       .....+.+++..|++.+|++  ||++.++++.
T Consensus       256 ~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~~p~r~~R~s~~ell~h  304 (370)
T cd05596         256 YSKIMDHKNSLTFPDDIEISKQAKDLICAFLTDREVRLGRNGVDEIKSH  304 (370)
T ss_pred             HHHHHcCCCcCCCCCcCCCCHHHHHHHHHHccChhhccCCCCHHHHhcC
Confidence                             11234556777999988987  9999999754

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in

>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases

Probab=99.80  E-value=5.9e-20  Score=171.37  Aligned_cols=161  Identities=20%  Similarity=0.222  Sum_probs=112.7

Q ss_pred             CCCeeEEecCccCCCcChhhhhhhcc----ccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEcCCCCCeEee
Q 045577          198 DGEVFLMFEGIKLPDKSEFTCEFECS----KYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEINPNISD  273 (392)
Q Consensus       198 ~~~~~lv~e~~~~~~l~~~~~~~~~~----~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~~~~~~kl~D  273 (392)
                      .+..|++|||++++++..........    .....+..++.|++.||.|||+.   +|+||||||+||+++.++.+||+|
T Consensus        67 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nill~~~~~~kl~d  143 (269)
T cd05042          67 SIPYLLVLEFCPLGDLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQA---DFIHSDLALRNCQLTADLSVKIGD  143 (269)
T ss_pred             CCceEEEEEeCCCCcHHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHhc---CEecccccHhheEecCCCcEEEec
Confidence            46789999999999997755443221    12344678999999999999998   899999999999999999999999


Q ss_pred             eeceEEeCCCCc-ceeceeeecccccCchhHH-------------HHHHHhcCCCcc-eeec-ccccCCCCCCH------
Q 045577          274 FGPARIFGDQTE-EVTGRVIGTQTLKTVPELL-------------QAWKLWSEGDPM-EIID-EQTKMKGPFSA------  331 (392)
Q Consensus       274 FGla~~~~~~~~-~~~~~~~gt~~y~a~~~~~-------------~~~diws~G~v~-~~ld-~~~~~~~~~~~------  331 (392)
                      ||++........ .......++..|+| ||+.             .+.|+|+.|+++ +++. +...+....+.      
T Consensus       144 fg~~~~~~~~~~~~~~~~~~~~~~y~a-PE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~  222 (269)
T cd05042         144 YGLALEQYPEDYYITKDCHAVPLRWLA-PELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPDLSDEQVLKQV  222 (269)
T ss_pred             cccccccccchheeccCCCCCcccccC-HHHHhhccccccccccchhhHHHHHHHHHHHHHhCCCCCCCcCCHHHHHHHH
Confidence            999865432111 11122345667988 7653             368999999876 4443 22222111111      


Q ss_pred             ---------------HHHHHHHHHHHhhcccCcCCCCCHHHHHHHHc
Q 045577          332 ---------------DELVKCIEVGLLCVQQRIEDWPTMSSVLTMLS  363 (392)
Q Consensus       332 ---------------~~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~L~  363 (392)
                                     .....+.+++..|+ .||++||++.+|+++|.
T Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~dp~~Rpt~~~v~~~l~  268 (269)
T cd05042         223 VREQDIKLPKPQLDLKYSDRWYEVMQFCW-LDPETRPTAEEVHELLT  268 (269)
T ss_pred             hhccCccCCCCcccccCCHHHHHHHHHHh-cCcccccCHHHHHHHhc
Confidence                           11123445667888 59999999999999884

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina

>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors

Probab=99.80  E-value=5e-20  Score=178.26  Aligned_cols=136  Identities=24%  Similarity=0.329  Sum_probs=102.0

Q ss_pred             chhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEcCCCCCeEeeeeceEEeCCCCc-ceeceeeecccccCchhHH
Q 045577          226 SSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEINPNISDFGPARIFGDQTE-EVTGRVIGTQTLKTVPELL  304 (392)
Q Consensus       226 ~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~~-~~~~~~~gt~~y~a~~~~~  304 (392)
                      ...+.+++.||+.||.|||+.   +|+||||||+||+++.++.+||+|||+++.+..... .......++..|+| ||..
T Consensus       172 ~~~~~~~~~qi~~aL~~lH~~---~ivHrDikp~Nill~~~~~vkL~DfG~a~~~~~~~~~~~~~~~~~~~~y~a-PE~~  247 (337)
T cd05054         172 LEDLISYSFQVARGMEFLASR---KCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMA-PESI  247 (337)
T ss_pred             HHHHHHHHHHHHHHHHHHHhC---CeecCCCCcceEEEeCCCcEEEeccccchhcccCcchhhccCCCCCccccC-cHHh
Confidence            334678899999999999998   899999999999999999999999999987542211 12222455678999 7654


Q ss_pred             ------HHHHHhcCCCcc-eeec-ccccCCCCCCHH-----------------HHHHHHHHHHhhcccCcCCCCCHHHHH
Q 045577          305 ------QAWKLWSEGDPM-EIID-EQTKMKGPFSAD-----------------ELVKCIEVGLLCVQQRIEDWPTMSSVL  359 (392)
Q Consensus       305 ------~~~diws~G~v~-~~ld-~~~~~~~~~~~~-----------------~~~~~~~i~~~Cl~~dp~~RPsm~eVv  359 (392)
                            .+.|+|+.|+++ +++. +..++.+....+                 ....+.+++.+|++.+|++||++.+|+
T Consensus       248 ~~~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~ell  327 (337)
T cd05054         248 FDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQIDEEFCRRLKEGTRMRAPEYATPEIYSIMLDCWHNNPEDRPTFSELV  327 (337)
T ss_pred             cCCCCCccccHHHHHHHHHHHHHcCCCCCCCCCccHHHHHHHhccCCCCCCccCCHHHHHHHHHHccCChhhCcCHHHHH
Confidence                  367999999887 4443 433332211111                 123567888999999999999999999


Q ss_pred             HHHccC
Q 045577          360 TMLSNE  365 (392)
Q Consensus       360 ~~L~~~  365 (392)
                      ++|+..
T Consensus       328 ~~l~~~  333 (337)
T cd05054         328 EILGDL  333 (337)
T ss_pred             HHHHHH
Confidence            999865

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto

>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2

Probab=99.80  E-value=1.1e-19  Score=170.63  Aligned_cols=164  Identities=20%  Similarity=0.188  Sum_probs=120.5

Q ss_pred             CCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEcCCCCCeEeeeece
Q 045577          198 DGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEINPNISDFGPA  277 (392)
Q Consensus       198 ~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~~~~~~kl~DFGla  277 (392)
                      ....++++||++++++.....+.........++.++.|++.||.|||+.   +++||||||+||+++.++.+||+|||++
T Consensus        80 ~~~~~l~~~~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~lH~~---~iiH~dlkp~Nil~~~~~~~kL~dfG~~  156 (279)
T cd05109          80 TSTVQLVTQLMPYGCLLDYVRENKDRIGSQDLLNWCVQIAKGMSYLEEV---RLVHRDLAARNVLVKSPNHVKITDFGLA  156 (279)
T ss_pred             CCCcEEEEEcCCCCCHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccccceEEEcCCCcEEECCCCce
Confidence            3567899999999998776554433345556888999999999999998   8999999999999999999999999999


Q ss_pred             EEeCCCCc-ceeceeeecccccCchhHH------HHHHHhcCCCcc-eeec-ccccCCCCC----------------CHH
Q 045577          278 RIFGDQTE-EVTGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIID-EQTKMKGPF----------------SAD  332 (392)
Q Consensus       278 ~~~~~~~~-~~~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld-~~~~~~~~~----------------~~~  332 (392)
                      +....... .......++..|++ ||..      ...|+|+.|+++ +++. +...+....                +..
T Consensus       157 ~~~~~~~~~~~~~~~~~~~~y~~-PE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~  235 (279)
T cd05109         157 RLLDIDETEYHADGGKVPIKWMA-LESILHRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPAREIPDLLEKGERLPQPPI  235 (279)
T ss_pred             eecccccceeecCCCccchhhCC-HHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCCCcCCCCcc
Confidence            87652211 11111234567888 6654      367999999876 4444 322221111                111


Q ss_pred             HHHHHHHHHHhhcccCcCCCCCHHHHHHHHccC
Q 045577          333 ELVKCIEVGLLCVQQRIEDWPTMSSVLTMLSNE  365 (392)
Q Consensus       333 ~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~L~~~  365 (392)
                      ....+.+++..|++.||++||++.++++.|+..
T Consensus       236 ~~~~~~~li~~~l~~dp~~Rp~~~~l~~~l~~~  268 (279)
T cd05109         236 CTIDVYMIMVKCWMIDSECRPRFRELVDEFSRM  268 (279)
T ss_pred             CCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHh
Confidence            223556788899999999999999999999776

Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve

>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron

Probab=99.80  E-value=5.6e-20  Score=170.63  Aligned_cols=164  Identities=20%  Similarity=0.228  Sum_probs=118.5

Q ss_pred             CCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEcCCCCCeEeeeece
Q 045577          198 DGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEINPNISDFGPA  277 (392)
Q Consensus       198 ~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~~~~~~kl~DFGla  277 (392)
                      ++..+++|||+.++++.....+..-......+..++.|++.||.|||+.   +++||||||+||+++.++.+||+|||++
T Consensus        69 ~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlk~~nili~~~~~~kl~dfg~~  145 (262)
T cd05058          69 EGSPLVVLPYMKHGDLRNFIRSETHNPTVKDLIGFGLQVAKGMEYLASK---KFVHRDLAARNCMLDESFTVKVADFGLA  145 (262)
T ss_pred             CCCcEEEEecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CccccccCcceEEEcCCCcEEECCcccc
Confidence            4567999999999998776543322223344678899999999999998   8999999999999999999999999998


Q ss_pred             EEeCCCCc---ceeceeeecccccCchhHH------HHHHHhcCCCcc-eeecc-cccCCCC----------------CC
Q 045577          278 RIFGDQTE---EVTGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIIDE-QTKMKGP----------------FS  330 (392)
Q Consensus       278 ~~~~~~~~---~~~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld~-~~~~~~~----------------~~  330 (392)
                      +.......   .......++..|+| ||..      .+.|+|++|+++ +++.+ .+.+...                .+
T Consensus       146 ~~~~~~~~~~~~~~~~~~~~~~y~a-PE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (262)
T cd05058         146 RDIYDKEYYSVHNHTGAKLPVKWMA-LESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVDSFDITVYLLQGRRLLQP  224 (262)
T ss_pred             ccccCCcceeecccccCcCCccccC-hhHhccCccchHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhcCCCCCCC
Confidence            76532111   11112345667888 6654      378999999876 45443 2221110                01


Q ss_pred             HHHHHHHHHHHHhhcccCcCCCCCHHHHHHHHccC
Q 045577          331 ADELVKCIEVGLLCVQQRIEDWPTMSSVLTMLSNE  365 (392)
Q Consensus       331 ~~~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~L~~~  365 (392)
                      ......+.+++..|++.+|++||++.+|++.|+..
T Consensus       225 ~~~~~~~~~li~~cl~~~p~~Rp~~~~il~~l~~~  259 (262)
T cd05058         225 EYCPDPLYEVMLSCWHPKPEMRPTFSELVSRIEQI  259 (262)
T ss_pred             CcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHH
Confidence            11234567888899999999999999999999865

Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca

>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa

Probab=99.80  E-value=8.2e-20  Score=169.65  Aligned_cols=165  Identities=21%  Similarity=0.222  Sum_probs=120.3

Q ss_pred             CCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEcCCCCCeEeeeec
Q 045577          197 GDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEINPNISDFGP  276 (392)
Q Consensus       197 ~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~~~~~~kl~DFGl  276 (392)
                      +....+++|||++++++...............+.+++.|++.||.|||++   +++||||||+||+++.++.+||+|||+
T Consensus        65 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~nil~~~~~~~kl~dfg~  141 (257)
T cd05115          65 EAEALMLVMEMASGGPLNKFLSGKKDEITVSNVVELMHQVSMGMKYLEGK---NFVHRDLAARNVLLVNQHYAKISDFGL  141 (257)
T ss_pred             cCCCeEEEEEeCCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhc---CeeecccchheEEEcCCCcEEeccCCc
Confidence            34568999999999998765543333345566889999999999999998   899999999999999999999999999


Q ss_pred             eEEeCCCCccee--ceeeecccccCchhHH------HHHHHhcCCCcc-eeec-ccccCCCCCC----------------
Q 045577          277 ARIFGDQTEEVT--GRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIID-EQTKMKGPFS----------------  330 (392)
Q Consensus       277 a~~~~~~~~~~~--~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld-~~~~~~~~~~----------------  330 (392)
                      ++..........  ....++..|+| ||..      ...|+|++|+++ +++. +..++.....                
T Consensus       142 ~~~~~~~~~~~~~~~~~~~~~~y~a-PE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~  220 (257)
T cd05115         142 SKALGADDSYYKARSAGKWPLKWYA-PECINFRKFSSRSDVWSYGITMWEAFSYGQKPYKKMKGPEVMSFIEQGKRLDCP  220 (257)
T ss_pred             cccccCCccceeccCCCCCCcccCC-HHHHccCCCCchhhHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHHCCCCCCCC
Confidence            986542222111  11223567898 6654      268999999876 4443 4333322111                


Q ss_pred             HHHHHHHHHHHHhhcccCcCCCCCHHHHHHHHccC
Q 045577          331 ADELVKCIEVGLLCVQQRIEDWPTMSSVLTMLSNE  365 (392)
Q Consensus       331 ~~~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~L~~~  365 (392)
                      ......+.+++..|++.+|++||++.+|.+.|+..
T Consensus       221 ~~~~~~l~~li~~c~~~~~~~Rp~~~~i~~~l~~~  255 (257)
T cd05115         221 AECPPEMYALMKDCWIYKWEDRPNFAKVEERMRTY  255 (257)
T ss_pred             CCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHhhh
Confidence            11234566788899999999999999999999753

Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho

>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2

Probab=99.80  E-value=6.4e-20  Score=179.81  Aligned_cols=171  Identities=16%  Similarity=0.170  Sum_probs=122.0

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEc
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLD  264 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~  264 (392)
                      |++.++.......++..|+||||++++++.......  ......+..++.|++.||.|||+.   +|+||||||+||+++
T Consensus       102 hp~iv~~~~~~~~~~~~~lv~Ey~~gg~L~~~l~~~--~~~~~~~~~~~~qil~aL~~LH~~---~IvHrDLKp~NILl~  176 (370)
T cd05621         102 SPWVVQLFCAFQDDKYLYMVMEYMPGGDLVNLMSNY--DVPEKWAKFYTAEVVLALDAIHSM---GLIHRDVKPDNMLLD  176 (370)
T ss_pred             CCCEeeEEEEEEcCCEEEEEEcCCCCCcHHHHHHhc--CCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHEEEC
Confidence            455555444444456799999999999998765432  234555788999999999999998   899999999999999


Q ss_pred             CCCCCeEeeeeceEEeCCCCcceeceeeecccccCchhHH----------HHHHHhcCCCcc-eeecccccCCCCCCHH-
Q 045577          265 AEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELL----------QAWKLWSEGDPM-EIIDEQTKMKGPFSAD-  332 (392)
Q Consensus       265 ~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~----------~~~diws~G~v~-~~ld~~~~~~~~~~~~-  332 (392)
                      .++.+||+|||+++..............||+.|+| ||+.          ...|+|+.|+++ +++.+..++.+..... 
T Consensus       177 ~~~~~kL~DFG~a~~~~~~~~~~~~~~~gt~~Y~a-PE~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~~~~~~~~  255 (370)
T cd05621         177 KHGHLKLADFGTCMKMDETGMVRCDTAVGTPDYIS-PEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLVGT  255 (370)
T ss_pred             CCCCEEEEecccceecccCCceecccCCCCcccCC-HHHHhccCCCCCCCcccCEEeehHHHHHHHhCCCCCCCCCHHHH
Confidence            99999999999998764322223334679999999 7754          257999999876 5555544443221111 


Q ss_pred             ------------------HHHHHHHHHHhhcccCcCC--CCCHHHHHHH
Q 045577          333 ------------------ELVKCIEVGLLCVQQRIED--WPTMSSVLTM  361 (392)
Q Consensus       333 ------------------~~~~~~~i~~~Cl~~dp~~--RPsm~eVv~~  361 (392)
                                        ....+.+++..|++.++.+  ||++.++++.
T Consensus       256 ~~~i~~~~~~~~~p~~~~~s~~~~~li~~~L~~~~~r~~R~~~~e~l~h  304 (370)
T cd05621         256 YSKIMDHKNSLNFPEDVEISKHAKNLICAFLTDREVRLGRNGVEEIKQH  304 (370)
T ss_pred             HHHHHhCCcccCCCCcccCCHHHHHHHHHHccCchhccCCCCHHHHhcC
Confidence                              1223445566777755543  8899998876

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found

>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors

Probab=99.80  E-value=7.8e-20  Score=174.04  Aligned_cols=177  Identities=20%  Similarity=0.220  Sum_probs=127.3

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhh-ccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEE
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFE-CSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLL  263 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~-~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll  263 (392)
                      |++.++.......++..|++|||+.++++.....+.. .......+..++.|++.||.|||+.   +++|+||||+||++
T Consensus        98 h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~---~ivH~dlkp~Nil~  174 (302)
T cd05055          98 HENIVNLLGACTIGGPILVITEYCCYGDLLNFLRRKRESFLTLEDLLSFSYQVAKGMAFLASK---NCIHRDLAARNVLL  174 (302)
T ss_pred             CCCcceEEEEEecCCceEEEEEcCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeehhhhccceEEE
Confidence            5555555444444567899999999999877554322 2235556788999999999999998   89999999999999


Q ss_pred             cCCCCCeEeeeeceEEeCCCCc-ceeceeeecccccCchhHH------HHHHHhcCCCcc-eeec-ccccCCCCCCH---
Q 045577          264 DAEINPNISDFGPARIFGDQTE-EVTGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIID-EQTKMKGPFSA---  331 (392)
Q Consensus       264 ~~~~~~kl~DFGla~~~~~~~~-~~~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld-~~~~~~~~~~~---  331 (392)
                      +.++.+|++|||+++....... .......++..|+| ||..      ...|+|+.|+++ +++. +..++......   
T Consensus       175 ~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~a-PE~~~~~~~~~~~DiwslGvil~el~t~g~~p~~~~~~~~~~  253 (302)
T cd05055         175 THGKIVKICDFGLARDIMNDSNYVVKGNARLPVKWMA-PESIFNCVYTFESDVWSYGILLWEIFSLGSNPYPGMPVDSKF  253 (302)
T ss_pred             cCCCeEEECCCcccccccCCCceeecCCCCcccccCC-HhhhccCCCCcHhHHHHHHHHHHHHHhCCCCCcCCCCchHHH
Confidence            9999999999999986542221 11222345677999 6653      367999999877 4443 33332211111   


Q ss_pred             --------------HHHHHHHHHHHhhcccCcCCCCCHHHHHHHHccC
Q 045577          332 --------------DELVKCIEVGLLCVQQRIEDWPTMSSVLTMLSNE  365 (392)
Q Consensus       332 --------------~~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~L~~~  365 (392)
                                    .....+.+++..|++.+|++||++.+|++.|+..
T Consensus       254 ~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ell~~l~~~  301 (302)
T cd05055         254 YKLIKEGYRMAQPEHAPAEIYDIMKTCWDADPLKRPTFKQIVQLIGKQ  301 (302)
T ss_pred             HHHHHcCCcCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHhh
Confidence                          1123566788899999999999999999999763

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept

>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3

Probab=99.80  E-value=6.9e-20  Score=171.04  Aligned_cols=174  Identities=19%  Similarity=0.208  Sum_probs=119.4

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhh--c--cccchhhhhHHHHHHHhhhhcCcCCCCceeecccccce
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFE--C--SKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSN  260 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~--~--~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~N  260 (392)
                      |++.++......+....+++|||++++++........  .  ......+..++.|++.||.|||+.   +++||||||+|
T Consensus        54 h~~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~dlkp~n  130 (269)
T cd05087          54 HSNLLQCLGQCTEVTPYLLVMEFCPLGDLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHKN---NFIHSDLALRN  130 (269)
T ss_pred             CCCEeeEEEEEcCCCCcEEEEECCCCCcHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHC---CEeccccCcce
Confidence            4444444333333456899999999999877543321  1  113334678899999999999998   89999999999


Q ss_pred             eEEcCCCCCeEeeeeceEEeCCCCc-ceeceeeecccccCchhHH-------------HHHHHhcCCCcc-eeec-cccc
Q 045577          261 VLLDAEINPNISDFGPARIFGDQTE-EVTGRVIGTQTLKTVPELL-------------QAWKLWSEGDPM-EIID-EQTK  324 (392)
Q Consensus       261 Ill~~~~~~kl~DFGla~~~~~~~~-~~~~~~~gt~~y~a~~~~~-------------~~~diws~G~v~-~~ld-~~~~  324 (392)
                      |+++.++.+|++|||+++....... .......++..|+| ||+.             .+.|+|+.|+++ +++. +..+
T Consensus       131 il~~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~a-PE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p  209 (269)
T cd05087         131 CLLTADLTVKIGDYGLSHNKYKEDYYVTPDQLWVPLRWIA-PELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQP  209 (269)
T ss_pred             EEEcCCCcEEECCccccccccCcceeecCCCcCCcccccC-HhHhccccccccccCCCccchhHHHHHHHHHHHhCCCCC
Confidence            9999999999999999875432211 11122456788999 7754             257999999865 4553 4333


Q ss_pred             CCCCCCHH---------------------HHHHHHHHHHhhcccCcCCCCCHHHHHHHHc
Q 045577          325 MKGPFSAD---------------------ELVKCIEVGLLCVQQRIEDWPTMSSVLTMLS  363 (392)
Q Consensus       325 ~~~~~~~~---------------------~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~L~  363 (392)
                      +......+                     ....+.+++..|+ .+|++||++.+|+..|+
T Consensus       210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~-~~P~~Rpt~~~l~~~l~  268 (269)
T cd05087         210 YRHLSDEQVLTYTVREQQLKLPKPRLKLPLSDRWYEVMQFCW-LQPEQRPSAEEVHLLLS  268 (269)
T ss_pred             CCCCChHHHHHHHhhcccCCCCCCccCCCCChHHHHHHHHHh-cCcccCCCHHHHHHHhc
Confidence            32211111                     1123445777898 57999999999999885

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells

>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase

Probab=99.80  E-value=7.9e-20  Score=179.15  Aligned_cols=156  Identities=22%  Similarity=0.315  Sum_probs=113.7

Q ss_pred             CeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEcCCCCCeEeeeeceEE
Q 045577          200 EVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEINPNISDFGPARI  279 (392)
Q Consensus       200 ~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~~~~~~kl~DFGla~~  279 (392)
                      ..|++|||+.. ++........ ......+..++.|++.||.|||+.   +++||||||+||+++.++.+||+|||+++.
T Consensus        78 ~~~lv~e~~~~-~l~~~~~~~~-~l~~~~~~~~~~qi~~aL~~LH~~---~ivH~dlkp~Nili~~~~~~kL~Dfg~a~~  152 (372)
T cd07853          78 EIYVVTELMQS-DLHKIIVSPQ-PLSSDHVKVFLYQILRGLKYLHSA---GILHRDIKPGNLLVNSNCVLKICDFGLARV  152 (372)
T ss_pred             eEEEEeecccc-CHHHHHhcCC-CCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChHHEEECCCCCEEeccccceee
Confidence            68999999974 4433332222 234445788999999999999998   899999999999999999999999999987


Q ss_pred             eCCCCcceeceeeecccccCchhHH-------HHHHHhcCCCcc-eeecccccCCCCCCHH-------------------
Q 045577          280 FGDQTEEVTGRVIGTQTLKTVPELL-------QAWKLWSEGDPM-EIIDEQTKMKGPFSAD-------------------  332 (392)
Q Consensus       280 ~~~~~~~~~~~~~gt~~y~a~~~~~-------~~~diws~G~v~-~~ld~~~~~~~~~~~~-------------------  332 (392)
                      .............+++.|+| ||..       .+.|+|+.|+++ +++.++..+.+....+                   
T Consensus       153 ~~~~~~~~~~~~~~~~~y~a-PE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~  231 (372)
T cd07853         153 EEPDESKHMTQEVVTQYYRA-PEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQAQSPIQQLDLITDLLGTPSLEAMRS  231 (372)
T ss_pred             cccCccccCCCCCcCCCcCC-HHHHcCCCCCCcHHHHHhHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHH
Confidence            54322222233467889999 6654       367999999876 5555544332221111                   


Q ss_pred             ----------------------------HHHHHHHHHHhhcccCcCCCCCHHHHHHH
Q 045577          333 ----------------------------ELVKCIEVGLLCVQQRIEDWPTMSSVLTM  361 (392)
Q Consensus       333 ----------------------------~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~  361 (392)
                                                  ....+.+++..|++.||++|||+.++++.
T Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~h  288 (372)
T cd07853         232 ACEGARAHILRGPHKPPSLPVLYTLSSQATHEAVHLLCRMLVFDPDKRISAADALAH  288 (372)
T ss_pred             hhHHHHHHHHhCCCCCCchHHhcccCCCCCHHHHHHHHHhCCCChhhCcCHHHHhcC
Confidence                                        12245678889999999999999999864

Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription

>PTZ00283 serine/threonine protein kinase; Provisional

Probab=99.80  E-value=6.7e-20  Score=186.13  Aligned_cols=158  Identities=17%  Similarity=0.220  Sum_probs=118.2

Q ss_pred             CeeEEecCccCCCcChhhhhhh---ccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEcCCCCCeEeeeec
Q 045577          200 EVFLMFEGIKLPDKSEFTCEFE---CSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEINPNISDFGP  276 (392)
Q Consensus       200 ~~~lv~e~~~~~~l~~~~~~~~---~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~~~~~~kl~DFGl  276 (392)
                      ..+++|||++++++........   ....+..+..++.|++.||.|||+.   +|+||||||+||+++.++.+||+|||+
T Consensus       113 ~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH~~---~IiHrDLKP~NILl~~~~~vkL~DFGl  189 (496)
T PTZ00283        113 MIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVHSK---HMIHRDIKSANILLCSNGLVKLGDFGF  189 (496)
T ss_pred             EEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEeCCCCEEEEeccc
Confidence            3689999999999977543321   1224445788999999999999998   899999999999999999999999999


Q ss_pred             eEEeCCC-CcceeceeeecccccCchhHH------HHHHHhcCCCcc-eeecccccCCCCCC----------------HH
Q 045577          277 ARIFGDQ-TEEVTGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIIDEQTKMKGPFS----------------AD  332 (392)
Q Consensus       277 a~~~~~~-~~~~~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld~~~~~~~~~~----------------~~  332 (392)
                      ++.+... .........||+.|+| ||..      .+.|+|+.|+++ +++.+..++.+...                ..
T Consensus       190 s~~~~~~~~~~~~~~~~Gt~~Y~a-PE~~~~~~~s~k~DVwSlGvilyeLltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~  268 (496)
T PTZ00283        190 SKMYAATVSDDVGRTFCGTPYYVA-PEIWRRKPYSKKADMFSLGVLLYELLTLKRPFDGENMEEVMHKTLAGRYDPLPPS  268 (496)
T ss_pred             CeeccccccccccccccCCcceeC-HHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhcCCCCCCCCC
Confidence            9876522 1222334679999999 7765      368999999876 55555433322211                11


Q ss_pred             HHHHHHHHHHhhcccCcCCCCCHHHHHHH
Q 045577          333 ELVKCIEVGLLCVQQRIEDWPTMSSVLTM  361 (392)
Q Consensus       333 ~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~  361 (392)
                      ....+.+++..|++.+|++||++.++++.
T Consensus       269 ~~~~l~~li~~~L~~dP~~RPs~~ell~~  297 (496)
T PTZ00283        269 ISPEMQEIVTALLSSDPKRRPSSSKLLNM  297 (496)
T ss_pred             CCHHHHHHHHHHcccChhhCcCHHHHHhC
Confidence            22356678889999999999999998764

>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases

Probab=99.80  E-value=9.3e-20  Score=169.94  Aligned_cols=163  Identities=21%  Similarity=0.218  Sum_probs=117.3

Q ss_pred             CCeeEEecCccCCCcChhhhhhhc-----cccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEcCCCCCeEee
Q 045577          199 GEVFLMFEGIKLPDKSEFTCEFEC-----SKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEINPNISD  273 (392)
Q Consensus       199 ~~~~lv~e~~~~~~l~~~~~~~~~-----~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~~~~~~kl~D  273 (392)
                      ...+++|||++++++.........     ......+..++.|++.||.|||+.   +++||||||+||++++++.+||+|
T Consensus        80 ~~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~d  156 (273)
T cd05035          80 PKPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSNR---NFIHRDLAARNCMLREDMTVCVAD  156 (273)
T ss_pred             cccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhC---CeeccccchheEEECCCCeEEECC
Confidence            347999999999998765433211     124445788999999999999998   899999999999999999999999


Q ss_pred             eeceEEeCCCCcc-eeceeeecccccCchhHH------HHHHHhcCCCcc-eeec-ccccCCCCCC--------------
Q 045577          274 FGPARIFGDQTEE-VTGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIID-EQTKMKGPFS--------------  330 (392)
Q Consensus       274 FGla~~~~~~~~~-~~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld-~~~~~~~~~~--------------  330 (392)
                      ||+++.+...... ......++..|++ |+..      .+.|+|+.|+++ +++. +.+.+.+...              
T Consensus       157 fg~~~~~~~~~~~~~~~~~~~~~~~~~-pe~~~~~~~~~~~Dv~SlG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~~  235 (273)
T cd05035         157 FGLSKKIYSGDYYRQGRIAKMPVKWIA-IESLADRVYTSKSDVWAFGVTMWEIATRGQTPYPGVENHEIYDYLRHGNRLK  235 (273)
T ss_pred             ccceeeccccccccccccccCCccccC-HhhcccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCC
Confidence            9999876422111 1111234567888 5543      368999999877 4444 3222222111              


Q ss_pred             --HHHHHHHHHHHHhhcccCcCCCCCHHHHHHHHccC
Q 045577          331 --ADELVKCIEVGLLCVQQRIEDWPTMSSVLTMLSNE  365 (392)
Q Consensus       331 --~~~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~L~~~  365 (392)
                        ......+.+++.+|++.+|++||++.+|++.|+..
T Consensus       236 ~~~~~~~~~~~li~~~l~~~p~~Rp~~~e~~~~l~~~  272 (273)
T cd05035         236 QPEDCLDELYDLMYSCWRADPKDRPTFTKLREVLENI  272 (273)
T ss_pred             CCcCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence              11224667888899999999999999999999764

Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu

>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4

Probab=99.80  E-value=4.3e-20  Score=174.20  Aligned_cols=158  Identities=16%  Similarity=0.143  Sum_probs=117.6

Q ss_pred             CCCCeeEEecCccCCCcChhhhhhh-ccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEcCCCCCeEeeee
Q 045577          197 GDGEVFLMFEGIKLPDKSEFTCEFE-CSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEINPNISDFG  275 (392)
Q Consensus       197 ~~~~~~lv~e~~~~~~l~~~~~~~~-~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~~~~~~kl~DFG  275 (392)
                      .++..+++|||++++++........ ....+..+..++.|++.||.|||+.   +|+||||||+||+++.++.+||+|||
T Consensus        71 ~~~~~~lv~e~~~~g~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~iiH~dikp~Nill~~~~~~kl~Dfg  147 (285)
T cd05631          71 TKDALCLVLTIMNGGDLKFHIYNMGNPGFDEQRAIFYAAELCCGLEDLQRE---RIVYRDLKPENILLDDRGHIRISDLG  147 (285)
T ss_pred             cCCeEEEEEEecCCCcHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCCCHHHEEECCCCCEEEeeCC
Confidence            3567899999999999876543322 2234555788999999999999998   89999999999999999999999999


Q ss_pred             ceEEeCCCCcceeceeeecccccCchhHH------HHHHHhcCCCcc-eeecccccCCCCCC------------------
Q 045577          276 PARIFGDQTEEVTGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIIDEQTKMKGPFS------------------  330 (392)
Q Consensus       276 la~~~~~~~~~~~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld~~~~~~~~~~------------------  330 (392)
                      ++.......  ......|+..|+| ||+.      ...|+|+.|+++ +++.++.++.....                  
T Consensus       148 ~~~~~~~~~--~~~~~~g~~~y~a-PE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~  224 (285)
T cd05631         148 LAVQIPEGE--TVRGRVGTVGYMA-PEVINNEKYTFSPDWWGLGCLIYEMIQGQSPFRKRKERVKREEVDRRVKEDQEEY  224 (285)
T ss_pred             CcEEcCCCC--eecCCCCCCCccC-HhhhcCCCCCcccCchhHHHHHHHHHhCCCCCCCCCcchhHHHHHHHhhcccccC
Confidence            998754221  1223568999999 7754      367999999876 56655444432211                  


Q ss_pred             -HHHHHHHHHHHHhhcccCcCCCCC-----HHHHHH
Q 045577          331 -ADELVKCIEVGLLCVQQRIEDWPT-----MSSVLT  360 (392)
Q Consensus       331 -~~~~~~~~~i~~~Cl~~dp~~RPs-----m~eVv~  360 (392)
                       .+....+.+++..|++.||++||+     ++++++
T Consensus       225 ~~~~s~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~  260 (285)
T cd05631         225 SEKFSEDAKSICRMLLTKNPKERLGCRGNGAAGVKQ  260 (285)
T ss_pred             CccCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHhc
Confidence             011224566888999999999997     777776

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i

>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=99.80  E-value=6.1e-20  Score=180.57  Aligned_cols=176  Identities=23%  Similarity=0.212  Sum_probs=132.6

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEc
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLD  264 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~  264 (392)
                      |++.||.....+....++++||+|.+|+|..+..+..........+.++.+.|+||+|||++   ++|||||.++|+|+.
T Consensus       220 H~NVVr~yGVa~~~~Pl~ivmEl~~gGsL~~~L~k~~~~v~~~ek~~~~~~AA~Gl~YLh~k---~~IHRDIAARNcL~~  296 (474)
T KOG0194|consen  220 HPNVVRFYGVAVLEEPLMLVMELCNGGSLDDYLKKNKKSLPTLEKLRFCYDAARGLEYLHSK---NCIHRDIAARNCLYS  296 (474)
T ss_pred             CCCEEEEEEEEcCCCccEEEEEecCCCcHHHHHHhCCCCCCHHHHHHHHHHHHhHHHHHHHC---CCcchhHhHHHheec
Confidence            99999999988878899999999999999987776655445555789999999999999999   899999999999999


Q ss_pred             CCCCCeEeeeeceEEeCCCCcceeceeeecccccCchhHH------HHHHHhcCCCcc-eeecc-cccCCC---------
Q 045577          265 AEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIIDE-QTKMKG---------  327 (392)
Q Consensus       265 ~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld~-~~~~~~---------  327 (392)
                      .+..+||+|||+++.-. ..........-...|+| ||..      .+.|+|+.|++. |++.. ..++.+         
T Consensus       297 ~~~~vKISDFGLs~~~~-~~~~~~~~~klPirWLA-PEtl~~~~~s~kTDV~sfGV~~~Eif~~g~~Py~g~~~~~v~~k  374 (474)
T KOG0194|consen  297 KKGVVKISDFGLSRAGS-QYVMKKFLKKLPIRWLA-PETLNTGIFSFKTDVWSFGVLLWEIFENGAEPYPGMKNYEVKAK  374 (474)
T ss_pred             CCCeEEeCccccccCCc-ceeeccccccCcceecC-hhhhccCccccccchhheeeeEEeeeccCCCCCCCCCHHHHHHH
Confidence            99999999999987532 11111101123467888 6655      477999999876 44432 111111         


Q ss_pred             --------CCCHHHHHHHHHHHHhhcccCcCCCCCHHHHHHHHccC
Q 045577          328 --------PFSADELVKCIEVGLLCVQQRIEDWPTMSSVLTMLSNE  365 (392)
Q Consensus       328 --------~~~~~~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~L~~~  365 (392)
                              ..+......+..+...|++.+|++||+|.+|.+.|+..
T Consensus       375 I~~~~~r~~~~~~~p~~~~~~~~~c~~~~p~~R~tm~~i~~~l~~~  420 (474)
T KOG0194|consen  375 IVKNGYRMPIPSKTPKELAKVMKQCWKKDPEDRPTMSTIKKKLEAL  420 (474)
T ss_pred             HHhcCccCCCCCCCHHHHHHHHHHhccCChhhccCHHHHHHHHHHH
Confidence                    11112233444566699999999999999999999876

>PHA03212 serine/threonine kinase US3; Provisional

Probab=99.80  E-value=5.2e-20  Score=181.70  Aligned_cols=171  Identities=21%  Similarity=0.214  Sum_probs=120.7

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEc
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLD  264 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~  264 (392)
                      |++.++.......+...+++||++. +++........ ......++.++.|++.||.|||+.   +|+||||||+||+++
T Consensus       142 HpnIv~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~-~l~~~~~~~i~~qi~~aL~ylH~~---~IvHrDiKP~NIll~  216 (391)
T PHA03212        142 HPSIIQLKGTFTYNKFTCLILPRYK-TDLYCYLAAKR-NIAICDILAIERSVLRAIQYLHEN---RIIHRDIKAENIFIN  216 (391)
T ss_pred             CCCCCCEeEEEEECCeeEEEEecCC-CCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChHhEEEc
Confidence            6666666554444567899999986 45544333322 234455788999999999999998   899999999999999


Q ss_pred             CCCCCeEeeeeceEEeCCCCcceeceeeecccccCchhHH------HHHHHhcCCCcc-eeecccccCCCC---------
Q 045577          265 AEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIIDEQTKMKGP---------  328 (392)
Q Consensus       265 ~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld~~~~~~~~---------  328 (392)
                      .++.+||+|||+++..............||+.|+| ||+.      .+.|+|+.|+++ +++.+...+.+.         
T Consensus       217 ~~~~vkL~DFG~a~~~~~~~~~~~~~~~gt~~y~a-PE~~~~~~~~~~~DiwSlGvil~elltg~~p~~~~~~~~~~~~~  295 (391)
T PHA03212        217 HPGDVCLGDFGAACFPVDINANKYYGWAGTIATNA-PELLARDPYGPAVDIWSAGIVLFEMATCHDSLFEKDGLDGDCDS  295 (391)
T ss_pred             CCCCEEEEeCCcccccccccccccccccCccCCCC-hhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCcCCcccccccCch
Confidence            99999999999997543222222233579999999 6654      378999999876 444443221110         


Q ss_pred             -----------------CC--H-----------------------------HHHHHHHHHHHhhcccCcCCCCCHHHHHH
Q 045577          329 -----------------FS--A-----------------------------DELVKCIEVGLLCVQQRIEDWPTMSSVLT  360 (392)
Q Consensus       329 -----------------~~--~-----------------------------~~~~~~~~i~~~Cl~~dp~~RPsm~eVv~  360 (392)
                                       ++  .                             .....+.+++.+|++.||++|||+.|+++
T Consensus       296 ~~~l~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Li~~mL~~dP~~Rpta~elL~  375 (391)
T PHA03212        296 DRQIKLIIRRSGTHPNEFPIDAQANLDEIYIGLAKKSSRKPGSRPLWTNLYELPIDLEYLICKMLAFDAHHRPSAEALLD  375 (391)
T ss_pred             hHHHHHHHHHhcCChhhcCcchhHHHHHHHHHHHhccCCCCCCCCCHHHHhhhhhhHHHHHHHHhcCChhhCCCHHHHhc
Confidence                             00  0                             01124566788999999999999999985


Q ss_pred             H
Q 045577          361 M  361 (392)
Q Consensus       361 ~  361 (392)
                      .
T Consensus       376 h  376 (391)
T PHA03212        376 F  376 (391)
T ss_pred             C
Confidence            3

>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer

Probab=99.80  E-value=1.7e-19  Score=166.29  Aligned_cols=163  Identities=21%  Similarity=0.218  Sum_probs=118.3

Q ss_pred             CCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEcCCCCCeEeeeec
Q 045577          197 GDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEINPNISDFGP  276 (392)
Q Consensus       197 ~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~~~~~~kl~DFGl  276 (392)
                      ..+..+++|||++++++...............+..++.|++.||.|+|+.   +++|+||||+||+++.++.+|++|||+
T Consensus        63 ~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~~~H~dl~p~nili~~~~~~~l~d~g~  139 (250)
T cd05085          63 QRQPIYIVMELVPGGDFLSFLRKKKDELKTKQLVKFALDAAAGMAYLESK---NCIHRDLAARNCLVGENNVLKISDFGM  139 (250)
T ss_pred             cCCccEEEEECCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccChheEEEcCCCeEEECCCcc
Confidence            34568999999999988765433322234555788999999999999998   899999999999999999999999999


Q ss_pred             eEEeCCCCcceeceeeecccccCchhHH------HHHHHhcCCCcc-eeec-ccccCCCC----------------CCHH
Q 045577          277 ARIFGDQTEEVTGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIID-EQTKMKGP----------------FSAD  332 (392)
Q Consensus       277 a~~~~~~~~~~~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld-~~~~~~~~----------------~~~~  332 (392)
                      +...............++..|++ ||..      ...|+|+.|+++ +++. +..++.+.                .+..
T Consensus       140 ~~~~~~~~~~~~~~~~~~~~y~a-PE~~~~~~~~~~~Di~slG~ll~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~  218 (250)
T cd05085         140 SRQEDDGIYSSSGLKQIPIKWTA-PEALNYGRYSSESDVWSYGILLWETFSLGVCPYPGMTNQQAREQVEKGYRMSCPQK  218 (250)
T ss_pred             ceeccccccccCCCCCCcccccC-HHHhccCCCCchhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHcCCCCCCCCC
Confidence            87643221111112234567888 6654      368999999876 3443 32222111                1112


Q ss_pred             HHHHHHHHHHhhcccCcCCCCCHHHHHHHHc
Q 045577          333 ELVKCIEVGLLCVQQRIEDWPTMSSVLTMLS  363 (392)
Q Consensus       333 ~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~L~  363 (392)
                      ....+.+++..|++.+|++||++.+++++|.
T Consensus       219 ~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~  249 (250)
T cd05085         219 CPDDVYKVMQRCWDYKPENRPKFSELQKELA  249 (250)
T ss_pred             CCHHHHHHHHHHcccCcccCCCHHHHHHHhc
Confidence            2356778889999999999999999999985

Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c

>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A

Probab=99.80  E-value=1.1e-19  Score=170.85  Aligned_cols=176  Identities=19%  Similarity=0.210  Sum_probs=123.6

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhc--------------cccchhhhhHHHHHHHhhhhcCcCCCCc
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFEC--------------SKYSSYVTNILYGIARVILYLPEDSRLE  250 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~--------------~~~~~~~~~i~~~ia~gL~yLH~~~~~~  250 (392)
                      |++.++........+..+++|||++++++.........              ......+..++.|++.||.|||+.   +
T Consensus        66 h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~---~  142 (280)
T cd05092          66 HQHIVRFYGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLASL---H  142 (280)
T ss_pred             CCCCceEEEEEecCCceEEEEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHHC---C
Confidence            44444443333334568999999999988765443221              123445788999999999999998   8


Q ss_pred             eeecccccceeEEcCCCCCeEeeeeceEEeCCCCc-ceeceeeecccccCchhHH------HHHHHhcCCCcc-eeec-c
Q 045577          251 IIHRDHKTSNVLLDAEINPNISDFGPARIFGDQTE-EVTGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIID-E  321 (392)
Q Consensus       251 iiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~~-~~~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld-~  321 (392)
                      ++||||||+||++++++.+||+|||+++....... .......+++.|++ ||..      .+.|+|++|+++ +++. +
T Consensus       143 i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~a-PE~~~~~~~~~~~Di~slG~il~el~~~g  221 (280)
T cd05092         143 FVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMP-PESILYRKFTTESDIWSFGVVLWEIFTYG  221 (280)
T ss_pred             eecccccHhhEEEcCCCCEEECCCCceeEcCCCceeecCCCccccccccC-HHHhccCCcCchhhHHHHHHHHHHHHcCC
Confidence            99999999999999999999999999986542111 11122345678988 6644      368999999876 4554 4


Q ss_pred             cccCCCCCCH----------------HHHHHHHHHHHhhcccCcCCCCCHHHHHHHHcc
Q 045577          322 QTKMKGPFSA----------------DELVKCIEVGLLCVQQRIEDWPTMSSVLTMLSN  364 (392)
Q Consensus       322 ~~~~~~~~~~----------------~~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~L~~  364 (392)
                      .+++......                .....+.+++..|++.+|.+||++.+|.+.|+.
T Consensus       222 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~l~~~l~~  280 (280)
T cd05092         222 KQPWYQLSNTEAIECITQGRELERPRTCPPEVYAIMQGCWQREPQQRMVIKDIHSRLQA  280 (280)
T ss_pred             CCCCccCCHHHHHHHHHcCccCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHhC
Confidence            3332211111                112356678889999999999999999999863

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory

>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1

Probab=99.80  E-value=1e-19  Score=172.63  Aligned_cols=175  Identities=21%  Similarity=0.189  Sum_probs=122.6

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhh---------------ccccchhhhhHHHHHHHhhhhcCcCCCC
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFE---------------CSKYSSYVTNILYGIARVILYLPEDSRL  249 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~---------------~~~~~~~~~~i~~~ia~gL~yLH~~~~~  249 (392)
                      |++.++........+..|++|||++++++....++..               .......+..++.|++.||.|||+.   
T Consensus        62 hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~---  138 (297)
T cd05089          62 HPNIINLLGACENRGYLYIAIEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSEK---  138 (297)
T ss_pred             CCchhheEEEEccCCcceEEEEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHHC---
Confidence            4444444443334567899999999998877554322               1123445788999999999999997   


Q ss_pred             ceeecccccceeEEcCCCCCeEeeeeceEEeCCCCcceeceeeecccccCchhHH------HHHHHhcCCCcc-eeec-c
Q 045577          250 EIIHRDHKTSNVLLDAEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIID-E  321 (392)
Q Consensus       250 ~iiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld-~  321 (392)
                      +++||||||+||+++.++.+||+|||++......  ........+..|++ ||..      ...|+|++|+++ +++. +
T Consensus       139 ~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~--~~~~~~~~~~~y~a-PE~~~~~~~~~~~DvwSlG~il~el~t~g  215 (297)
T cd05089         139 QFIHRDLAARNVLVGENLASKIADFGLSRGEEVY--VKKTMGRLPVRWMA-IESLNYSVYTTKSDVWSFGVLLWEIVSLG  215 (297)
T ss_pred             CcccCcCCcceEEECCCCeEEECCcCCCccccce--eccCCCCcCccccC-chhhccCCCCchhhHHHHHHHHHHHHcCC
Confidence            8999999999999999999999999998642211  01111122456888 6543      478999999887 4443 4


Q ss_pred             cccCCCCCCH----------------HHHHHHHHHHHhhcccCcCCCCCHHHHHHHHccC
Q 045577          322 QTKMKGPFSA----------------DELVKCIEVGLLCVQQRIEDWPTMSSVLTMLSNE  365 (392)
Q Consensus       322 ~~~~~~~~~~----------------~~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~L~~~  365 (392)
                      ..++......                .....+.+++..|++.+|.+||++.++++.|+..
T Consensus       216 ~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~  275 (297)
T cd05089         216 GTPYCGMTCAELYEKLPQGYRMEKPRNCDDEVYELMRQCWRDRPYERPPFAQISVQLSRM  275 (297)
T ss_pred             CCCCCCCCHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence            3333221111                1223566788899999999999999999998875

Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.

>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta

Probab=99.80  E-value=7.3e-20  Score=175.50  Aligned_cols=170  Identities=18%  Similarity=0.140  Sum_probs=120.9

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEc
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLD  264 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~  264 (392)
                      |++.++........+..|++|||++++++........ ......+..++.|++.||.|||+.   +++||||||+||+++
T Consensus        55 hp~iv~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~-~~~~~~~~~~~~qi~~al~~LH~~---~ivHrdikp~Nil~~  130 (316)
T cd05619          55 HPFLTHLYCTFQTKENLFFVMEYLNGGDLMFHIQSCH-KFDLPRATFYAAEIICGLQFLHSK---GIVYRDLKLDNILLD  130 (316)
T ss_pred             CCcCcceEEEEEeCCEEEEEEeCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHhC---CeEeCCCCHHHEEEC
Confidence            3444443333333567899999999999976543322 223444678999999999999998   899999999999999


Q ss_pred             CCCCCeEeeeeceEEeCCCCcceeceeeecccccCchhHH------HHHHHhcCCCcc-eeecccccCCCCCCHH-----
Q 045577          265 AEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIIDEQTKMKGPFSAD-----  332 (392)
Q Consensus       265 ~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld~~~~~~~~~~~~-----  332 (392)
                      .++.+||+|||+++..... ........||..|+| ||..      .+.|+|+.|+++ +++.+..++......+     
T Consensus       131 ~~~~~kl~Dfg~~~~~~~~-~~~~~~~~gt~~y~a-PE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~~~~~i  208 (316)
T cd05619         131 TDGHIKIADFGMCKENMLG-DAKTCTFCGTPDYIA-PEILLGQKYNTSVDWWSFGVLLYEMLIGQSPFHGHDEEELFQSI  208 (316)
T ss_pred             CCCCEEEccCCcceECCCC-CCceeeecCCccccC-HHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCCCHHHHHHHH
Confidence            9999999999998754211 112234578999999 7765      367999999877 5555544433221111     


Q ss_pred             ----------HHHHHHHHHHhhcccCcCCCCCHH-HHHH
Q 045577          333 ----------ELVKCIEVGLLCVQQRIEDWPTMS-SVLT  360 (392)
Q Consensus       333 ----------~~~~~~~i~~~Cl~~dp~~RPsm~-eVv~  360 (392)
                                ....+.+++..|++.+|++||++. ++.+
T Consensus       209 ~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~~  247 (316)
T cd05619         209 RMDNPCYPRWLTREAKDILVKLFVREPERRLGVKGDIRQ  247 (316)
T ss_pred             HhCCCCCCccCCHHHHHHHHHHhccCHhhcCCChHHHHc
Confidence                      112355788899999999999996 5543

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in

>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]

Probab=99.80  E-value=6e-20  Score=180.01  Aligned_cols=164  Identities=18%  Similarity=0.193  Sum_probs=120.8

Q ss_pred             CCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEcCCCCCeEeeeece
Q 045577          198 DGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEINPNISDFGPA  277 (392)
Q Consensus       198 ~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~~~~~~kl~DFGla  277 (392)
                      +...-+|..+|++..|....+..+-.......++|+.|||+|+.|||.+   +|||||||..||++.+++.+||.|||++
T Consensus       459 ~p~~AIiTqwCeGsSLY~hlHv~etkfdm~~~idIAqQiaqGM~YLHAK---~IIHrDLKSnNIFl~~~~kVkIgDFGLa  535 (678)
T KOG0193|consen  459 NPPLAIITQWCEGSSLYTHLHVQETKFDMNTTIDIAQQIAQGMDYLHAK---NIIHRDLKSNNIFLHEDLKVKIGDFGLA  535 (678)
T ss_pred             CCceeeeehhccCchhhhhccchhhhhhHHHHHHHHHHHHHhhhhhhhh---hhhhhhccccceEEccCCcEEEecccce
Confidence            4445777888888887765554443334445789999999999999999   8999999999999999999999999998


Q ss_pred             EEeC-CCCcceeceeeecccccCchhHHH---------HHHHhcCCCcc-eeecccccCCCC------------------
Q 045577          278 RIFG-DQTEEVTGRVIGTQTLKTVPELLQ---------AWKLWSEGDPM-EIIDEQTKMKGP------------------  328 (392)
Q Consensus       278 ~~~~-~~~~~~~~~~~gt~~y~a~~~~~~---------~~diws~G~v~-~~ld~~~~~~~~------------------  328 (392)
                      ..-. -..+.......|...||| ||+..         ..|+|++|+++ |++.+..++...                  
T Consensus       536 tvk~~w~g~~q~~qp~gsilwmA-PEvIRmqd~nPfS~qSDVYaFGiV~YELltg~lPysi~~~dqIifmVGrG~l~pd~  614 (678)
T KOG0193|consen  536 TVKTRWSGEQQLEQPHGSLLWMA-PEVIRMQDDNPFSFQSDVYAFGIVWYELLTGELPYSIQNRDQIIFMVGRGYLMPDL  614 (678)
T ss_pred             eeeeeeccccccCCCccchhhhc-HHHHhhcccCCCCcccchhhhhHHHHHHHhCcCCcCCCChhheEEEecccccCccc
Confidence            7543 112222233467889999 77663         67999999886 444443222100                  


Q ss_pred             --CCHHHHHHHHHHHHhhcccCcCCCCCHHHHHHHHccC
Q 045577          329 --FSADELVKCIEVGLLCVQQRIEDWPTMSSVLTMLSNE  365 (392)
Q Consensus       329 --~~~~~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~L~~~  365 (392)
                        ......+.+.++...||..++++||.+.+|+.+|+..
T Consensus       615 s~~~s~~pk~mk~Ll~~C~~~~~~eRP~F~~il~~l~~l  653 (678)
T KOG0193|consen  615 SKIRSNCPKAMKRLLSDCWKFDREERPLFPQLLSKLEEL  653 (678)
T ss_pred             hhhhccCHHHHHHHHHHHHhcCcccCccHHHHHHHHHHh
Confidence              1122344667778899999999999999999988876

>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1

Probab=99.80  E-value=9.7e-20  Score=173.60  Aligned_cols=177  Identities=21%  Similarity=0.197  Sum_probs=124.6

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhc---------------cccchhhhhHHHHHHHhhhhcCcCCCC
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFEC---------------SKYSSYVTNILYGIARVILYLPEDSRL  249 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~---------------~~~~~~~~~i~~~ia~gL~yLH~~~~~  249 (392)
                      |++.++.......++..|++|||+.++++.........               ......+++++.|++.||.|||+.   
T Consensus        83 h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~---  159 (307)
T cd05098          83 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLASK---  159 (307)
T ss_pred             CCCEeeEEEEEecCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHC---
Confidence            45555554444445678999999999998876554321               123344788999999999999998   


Q ss_pred             ceeecccccceeEEcCCCCCeEeeeeceEEeCCCC-cceeceeeecccccCchhHH------HHHHHhcCCCcc-eeec-
Q 045577          250 EIIHRDHKTSNVLLDAEINPNISDFGPARIFGDQT-EEVTGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIID-  320 (392)
Q Consensus       250 ~iiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~-~~~~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld-  320 (392)
                      +++||||||+||+++.++.+||+|||+++...... ........++..|+| ||..      ...|+|+.|+++ +++. 
T Consensus       160 gi~H~dlkp~Nill~~~~~~kL~dfg~a~~~~~~~~~~~~~~~~~~~~y~a-PE~~~~~~~~~~~DvwslG~~l~el~~~  238 (307)
T cd05098         160 KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMA-PEALFDRIYTHQSDVWSFGVLLWEIFTL  238 (307)
T ss_pred             CcccccccHHheEEcCCCcEEECCCcccccccccchhhccccCCCccceeC-hHHhccCCCCcHHHHHHHHHHHHHHHcC
Confidence            89999999999999999999999999987653211 111111234467998 6644      368999999876 4443 


Q ss_pred             ccccCCC----------------CCCHHHHHHHHHHHHhhcccCcCCCCCHHHHHHHHccC
Q 045577          321 EQTKMKG----------------PFSADELVKCIEVGLLCVQQRIEDWPTMSSVLTMLSNE  365 (392)
Q Consensus       321 ~~~~~~~----------------~~~~~~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~L~~~  365 (392)
                      +...+..                +.+......+.+++..|++.+|++||+|.+|++.|+..
T Consensus       239 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~evl~~l~~~  299 (307)
T cd05098         239 GGSPYPGVPVEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI  299 (307)
T ss_pred             CCCCCCcCCHHHHHHHHHcCCCCCCCCcCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHH
Confidence            2222111                11111223566788899999999999999999999764

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]

Probab=99.80  E-value=4e-20  Score=173.40  Aligned_cols=170  Identities=18%  Similarity=0.228  Sum_probs=132.3

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEc
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLD  264 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~  264 (392)
                      |+..+...+.+.....+.+||||..+|++.+++.+...+ .+.....+++||..|+.|+|++   +++|||||.+|||+|
T Consensus       112 HPhII~IyEVFENkdKIvivMEYaS~GeLYDYiSer~~L-sErEaRhfFRQIvSAVhYCHkn---rVvHRDLKLENILLD  187 (668)
T KOG0611|consen  112 HPHIIQIYEVFENKDKIVIVMEYASGGELYDYISERGSL-SEREARHFFRQIVSAVHYCHKN---RVVHRDLKLENILLD  187 (668)
T ss_pred             CCceeehhhhhcCCceEEEEEEecCCccHHHHHHHhccc-cHHHHHHHHHHHHHHHHHHhhc---cceecccchhheeec
Confidence            888888888887678899999999999998876554443 4444788999999999999999   999999999999999


Q ss_pred             CCCCCeEeeeeceEEeCCCCcceeceeeecccccCchhHHH-------HHHHhcCCCcceeecccccCCCCCCHHHHH--
Q 045577          265 AEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELLQ-------AWKLWSEGDPMEIIDEQTKMKGPFSADELV--  335 (392)
Q Consensus       265 ~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~~-------~~diws~G~v~~~ld~~~~~~~~~~~~~~~--  335 (392)
                      .++++||+|||++-.+..  .....+++|++-|.+ ||+..       .+|-|++|.+++.+-.+...+...+...+.  
T Consensus       188 ~N~NiKIADFGLSNly~~--~kfLqTFCGSPLYAS-PEIvNG~PY~GPEVDsWsLGvLLYtLVyGtMPFDG~Dhk~lvrQ  264 (668)
T KOG0611|consen  188 QNNNIKIADFGLSNLYAD--KKFLQTFCGSPLYAS-PEIVNGTPYKGPEVDSWSLGVLLYTLVYGTMPFDGRDHKRLVRQ  264 (668)
T ss_pred             CCCCeeeeccchhhhhcc--ccHHHHhcCCcccCC-ccccCCCCCCCCccchhhHHHHHHHHhhcccccCCchHHHHHHH
Confidence            999999999999977643  233455899999988 77764       468999999885433221222222222222  


Q ss_pred             -------------HHHHHHHhhcccCcCCCCCHHHHHHH
Q 045577          336 -------------KCIEVGLLCVQQRIEDWPTMSSVLTM  361 (392)
Q Consensus       336 -------------~~~~i~~~Cl~~dp~~RPsm~eVv~~  361 (392)
                                   ...-++.|++..+|++|-|+.+|...
T Consensus       265 Is~GaYrEP~~PSdA~gLIRwmLmVNP~RRATieDiAsH  303 (668)
T KOG0611|consen  265 ISRGAYREPETPSDASGLIRWMLMVNPERRATIEDIASH  303 (668)
T ss_pred             hhcccccCCCCCchHHHHHHHHHhcCcccchhHHHHhhh
Confidence                         33447789999999999999999865

>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1

Probab=99.80  E-value=7.7e-20  Score=176.61  Aligned_cols=130  Identities=23%  Similarity=0.318  Sum_probs=96.3

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEc
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLD  264 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~  264 (392)
                      |++.++.......++..|++|||++++++.....+... .....+..++.|++.||.|||+.+  +++||||||+||+++
T Consensus        62 h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~~l~~~l~~lH~~~--~ivH~dlkp~Nili~  138 (333)
T cd06650          62 SPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR-IPEQILGKVSIAVIKGLTYLREKH--KIMHRDVKPSNILVN  138 (333)
T ss_pred             CCcccceeEEEEECCEEEEEEecCCCCcHHHHHHHcCC-CCHHHHHHHHHHHHHHHHHHHhcC--CEEecCCChhhEEEc
Confidence            44444444444446789999999999999776544322 344446789999999999999742  699999999999999


Q ss_pred             CCCCCeEeeeeceEEeCCCCcceeceeeecccccCchhHH------HHHHHhcCCCcc-eeecc
Q 045577          265 AEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIIDE  321 (392)
Q Consensus       265 ~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld~  321 (392)
                      .++.+||+|||++......   ......|+..|+| ||..      ...|+|+.|+++ +++.+
T Consensus       139 ~~~~~kL~Dfg~~~~~~~~---~~~~~~~~~~y~a-PE~~~~~~~~~~~DvwslG~il~~l~~g  198 (333)
T cd06650         139 SRGEIKLCDFGVSGQLIDS---MANSFVGTRSYMS-PERLQGTHYSVQSDIWSMGLSLVEMAIG  198 (333)
T ss_pred             CCCCEEEeeCCcchhhhhh---ccccCCCCccccC-HHHhcCCCCCcHHHHHHHHHHHHHHHHC
Confidence            9999999999998754321   1223468899999 7765      368999999876 44444

Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst

>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.80  E-value=5.7e-20  Score=178.33  Aligned_cols=171  Identities=19%  Similarity=0.255  Sum_probs=121.9

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEc
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLD  264 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~  264 (392)
                      +...++..+..-.++-+|+||||-+. ||.....+......-..+..+..|++.++.++|++   +|||.||||+|+|+-
T Consensus       419 ~~~IIqL~DYEv~d~~lYmvmE~Gd~-DL~kiL~k~~~~~~~~~lk~ywkqML~aV~~IH~~---gIVHSDLKPANFLlV  494 (677)
T KOG0596|consen  419 HDKIIQLYDYEVTDGYLYMVMECGDI-DLNKILKKKKSIDPDWFLKFYWKQMLLAVKTIHQH---GIVHSDLKPANFLLV  494 (677)
T ss_pred             CceEEEEeeeeccCceEEEEeecccc-cHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHh---ceeecCCCcccEEEE
Confidence            43444444444457789999999664 44444433333333235788999999999999998   999999999999986


Q ss_pred             CCCCCeEeeeeceEEeC-CCCcceeceeeecccccCchhHHH-----------------HHHHhcCCCcce-eecccccC
Q 045577          265 AEINPNISDFGPARIFG-DQTEEVTGRVIGTQTLKTVPELLQ-----------------AWKLWSEGDPME-IIDEQTKM  325 (392)
Q Consensus       265 ~~~~~kl~DFGla~~~~-~~~~~~~~~~~gt~~y~a~~~~~~-----------------~~diws~G~v~~-~ld~~~~~  325 (392)
                      + |.+||+|||+|..+. +.........+||..||+ ||.+.                 ..|+||+||+++ |+.+++++
T Consensus       495 k-G~LKLIDFGIA~aI~~DTTsI~kdsQvGT~NYMs-PEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYgktPf  572 (677)
T KOG0596|consen  495 K-GRLKLIDFGIANAIQPDTTSIVKDSQVGTVNYMS-PEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVYGKTPF  572 (677)
T ss_pred             e-eeEEeeeechhcccCccccceeeccccCcccccC-HHHHhhccccccCCCcceeecCccchhhhhhHHHHHHhcCCch
Confidence            4 689999999999887 444555566899999999 66542                 569999999984 33332222


Q ss_pred             CC------------------CCCH-HHHHHHHHHHHhhcccCcCCCCCHHHHHHH
Q 045577          326 KG------------------PFSA-DELVKCIEVGLLCVQQRIEDWPTMSSVLTM  361 (392)
Q Consensus       326 ~~------------------~~~~-~~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~  361 (392)
                      ..                  +++. .....+++++..|++.||++||++.++++.
T Consensus       573 ~~~~n~~aKl~aI~~P~~~Iefp~~~~~~~li~~mK~CL~rdPkkR~si~eLLqh  627 (677)
T KOG0596|consen  573 GQIINQIAKLHAITDPNHEIEFPDIPENDELIDVMKCCLARDPKKRWSIPELLQH  627 (677)
T ss_pred             HHHHHHHHHHHhhcCCCccccccCCCCchHHHHHHHHHHhcCcccCCCcHHHhcC
Confidence            10                  1110 011237888999999999999999998864

>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta

Probab=99.79  E-value=6.4e-20  Score=176.30  Aligned_cols=152  Identities=19%  Similarity=0.181  Sum_probs=114.8

Q ss_pred             CCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEcCCCCCeEeeeece
Q 045577          198 DGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEINPNISDFGPA  277 (392)
Q Consensus       198 ~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~~~~~~kl~DFGla  277 (392)
                      .+..|+||||++++++......... ..+..+..++.|++.||.|||+.   +|+||||||+|||++.++.+||+|||++
T Consensus        73 ~~~~~lv~E~~~~g~L~~~~~~~~~-~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~kL~DfG~~  148 (323)
T cd05616          73 MDRLYFVMEYVNGGDLMYQIQQVGR-FKEPHAVFYAAEIAIGLFFLHSK---GIIYRDLKLDNVMLDSEGHIKIADFGMC  148 (323)
T ss_pred             CCEEEEEEcCCCCCCHHHHHHHcCC-CCHHHHHHHHHHHHHHHHHHHHC---CEEecCCCHHHeEECCCCcEEEccCCCc
Confidence            4568999999999998765544333 33445788999999999999998   8999999999999999999999999999


Q ss_pred             EEeCCCCcceeceeeecccccCchhHHH------HHHHhcCCCcc-eeecccccCCCCCCHH---------------HHH
Q 045577          278 RIFGDQTEEVTGRVIGTQTLKTVPELLQ------AWKLWSEGDPM-EIIDEQTKMKGPFSAD---------------ELV  335 (392)
Q Consensus       278 ~~~~~~~~~~~~~~~gt~~y~a~~~~~~------~~diws~G~v~-~~ld~~~~~~~~~~~~---------------~~~  335 (392)
                      +..... ........||+.|+| ||+..      +.|+|+.|+++ +++.+..++.+....+               ...
T Consensus       149 ~~~~~~-~~~~~~~~gt~~y~a-PE~~~~~~~~~~~DiwSlGvil~elltg~~Pf~~~~~~~~~~~i~~~~~~~p~~~s~  226 (323)
T cd05616         149 KENMWD-GVTTKTFCGTPDYIA-PEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAYPKSMSK  226 (323)
T ss_pred             eecCCC-CCccccCCCChhhcC-HHHhcCCCCCCccchhchhHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCCcCCH
Confidence            764321 112234578999999 77653      67999999977 5666644443322211               123


Q ss_pred             HHHHHHHhhcccCcCCCCCH
Q 045577          336 KCIEVGLLCVQQRIEDWPTM  355 (392)
Q Consensus       336 ~~~~i~~~Cl~~dp~~RPsm  355 (392)
                      .+.+++..|++.+|++|++.
T Consensus       227 ~~~~li~~~l~~~p~~R~~~  246 (323)
T cd05616         227 EAVAICKGLMTKHPGKRLGC  246 (323)
T ss_pred             HHHHHHHHHcccCHHhcCCC
Confidence            45668889999999999974

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and

>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes

Probab=99.79  E-value=2.1e-19  Score=166.90  Aligned_cols=163  Identities=20%  Similarity=0.269  Sum_probs=119.1

Q ss_pred             CCCeeEEecCccCCCcChhhhhhh-ccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEcCCCCCeEeeeec
Q 045577          198 DGEVFLMFEGIKLPDKSEFTCEFE-CSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEINPNISDFGP  276 (392)
Q Consensus       198 ~~~~~lv~e~~~~~~l~~~~~~~~-~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~~~~~~kl~DFGl  276 (392)
                      .+..|++|||+.++++.....+.. .......+..++.|++.||.|||+.   +++|+||||+||++++++.+||+|||+
T Consensus        72 ~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~---~i~H~dl~~~Nill~~~~~~~l~dfg~  148 (260)
T cd05069          72 EEPIYIVTEFMGKGSLLDFLKEGDGKYLKLPQLVDMAAQIADGMAYIERM---NYIHRDLRAANILVGDNLVCKIADFGL  148 (260)
T ss_pred             CCCcEEEEEcCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CEeecccCcceEEEcCCCeEEECCCcc
Confidence            356799999999988876543321 2234455788999999999999998   899999999999999999999999999


Q ss_pred             eEEeCCCCcceeceeeecccccCchhHH------HHHHHhcCCCcc-eeec-ccccCCCCCC----------------HH
Q 045577          277 ARIFGDQTEEVTGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIID-EQTKMKGPFS----------------AD  332 (392)
Q Consensus       277 a~~~~~~~~~~~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld-~~~~~~~~~~----------------~~  332 (392)
                      ++..............++..|++ ||..      ...|+|+.|+++ +++. +...+.+..+                ..
T Consensus       149 ~~~~~~~~~~~~~~~~~~~~y~~-Pe~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~  227 (260)
T cd05069         149 ARLIEDNEYTARQGAKFPIKWTA-PEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMVNREVLEQVERGYRMPCPQG  227 (260)
T ss_pred             ceEccCCcccccCCCccchhhCC-HHHhccCCcChHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCcc
Confidence            98764222111122345677998 6654      368999999876 4544 4333322211                11


Q ss_pred             HHHHHHHHHHhhcccCcCCCCCHHHHHHHHcc
Q 045577          333 ELVKCIEVGLLCVQQRIEDWPTMSSVLTMLSN  364 (392)
Q Consensus       333 ~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~L~~  364 (392)
                      ....+.+++.+|++.+|++||++.+|++.|+.
T Consensus       228 ~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~  259 (260)
T cd05069         228 CPESLHELMKLCWKKDPDERPTFEYIQSFLED  259 (260)
T ss_pred             cCHHHHHHHHHHccCCcccCcCHHHHHHHHhc
Confidence            23456678889999999999999999999974

Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an

>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2

Probab=99.79  E-value=9.6e-20  Score=170.15  Aligned_cols=174  Identities=16%  Similarity=0.177  Sum_probs=116.9

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhcc---ccchhhhhHHHHHHHhhhhcCcCCCCceeeccccccee
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECS---KYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNV  261 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~---~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NI  261 (392)
                      |++-++...........|++|||++++++.....+..-.   .....+..++.|+++||.|||+.   +++||||||+||
T Consensus        54 h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~---~i~H~dikp~ni  130 (268)
T cd05086          54 HPNILQCLGQCVEAIPYLLVFEYCELGDLKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHKH---NFLHSDLALRNC  130 (268)
T ss_pred             CcchhheEEEecCCCccEEEEecCCCCcHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHC---CeeccCCccceE
Confidence            444444443333345689999999999987755442211   13334578899999999999998   899999999999


Q ss_pred             EEcCCCCCeEeeeeceEEeCCC-CcceeceeeecccccCchhHH-------------HHHHHhcCCCcc-eeec-ccccC
Q 045577          262 LLDAEINPNISDFGPARIFGDQ-TEEVTGRVIGTQTLKTVPELL-------------QAWKLWSEGDPM-EIID-EQTKM  325 (392)
Q Consensus       262 ll~~~~~~kl~DFGla~~~~~~-~~~~~~~~~gt~~y~a~~~~~-------------~~~diws~G~v~-~~ld-~~~~~  325 (392)
                      +++.++.+||+|||++...... .........++..|++ ||+.             .+.|+|+.|+++ +++. +..++
T Consensus       131 l~~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~~~y~a-PE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~  209 (268)
T cd05086         131 FLTSDLTVKVGDYGIGPSRYKEDYIETEDDKCVPLRWLA-PELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQPY  209 (268)
T ss_pred             EEcCCccEEecccccccccCcchhhhcccCCcCcccccC-chhcccccCccccCCCCCcchhHHHHHHHHHHHhCCCCCC
Confidence            9999999999999998643211 1111223457788998 6653             357999999876 3332 21112


Q ss_pred             CCCCCHH---------------------HHHHHHHHHHhhcccCcCCCCCHHHHHHHHc
Q 045577          326 KGPFSAD---------------------ELVKCIEVGLLCVQQRIEDWPTMSSVLTMLS  363 (392)
Q Consensus       326 ~~~~~~~---------------------~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~L~  363 (392)
                      ....+.+                     ...++.+++..|+ .+|++||++.+|++.|.
T Consensus       210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~-~~P~~Rp~~~~i~~~l~  267 (268)
T cd05086         210 SHLSDREVLNHVIKDQQVKLFKPQLELPYSERWYEVLQFCW-LSPEKRATAEEVHRLLT  267 (268)
T ss_pred             CCCCHHHHHHHHHhhcccccCCCccCCCCcHHHHHHHHHHh-hCcccCCCHHHHHHHhc
Confidence            1111111                     1123445667899 57999999999999884

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage

>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

Probab=99.79  E-value=1.2e-19  Score=168.23  Aligned_cols=162  Identities=22%  Similarity=0.271  Sum_probs=119.4

Q ss_pred             CCCeeEEecCccCCCcChhhhhhh-ccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEcCCCCCeEeeeec
Q 045577          198 DGEVFLMFEGIKLPDKSEFTCEFE-CSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEINPNISDFGP  276 (392)
Q Consensus       198 ~~~~~lv~e~~~~~~l~~~~~~~~-~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~~~~~~kl~DFGl  276 (392)
                      ....+++|||++++++........ .......+.+++.|++.||.|||+.   +++|+||||+||+++.++.+||+|||+
T Consensus        74 ~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~---~i~h~dl~~~nilv~~~~~~kl~d~g~  150 (261)
T cd05148          74 GEPVYIITELMEKGSLLAFLRSPEGQVLPVASLIDMACQVAEGMAYLEEQ---NSIHRDLAARNILVGEDLVCKVADFGL  150 (261)
T ss_pred             CCCeEEEEeecccCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccCcceEEEcCCceEEEccccc
Confidence            456899999999999877654422 2234555788999999999999998   899999999999999999999999999


Q ss_pred             eEEeCCCCcceeceeeecccccCchhHH------HHHHHhcCCCcc-eeec-ccccCCCCCC----------------HH
Q 045577          277 ARIFGDQTEEVTGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIID-EQTKMKGPFS----------------AD  332 (392)
Q Consensus       277 a~~~~~~~~~~~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld-~~~~~~~~~~----------------~~  332 (392)
                      +.......... ....++..|++ ||..      ...|+|++|+++ +++. +..++.....                ..
T Consensus       151 ~~~~~~~~~~~-~~~~~~~~~~~-PE~~~~~~~~~~~DiwslG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~  228 (261)
T cd05148         151 ARLIKEDVYLS-SDKKIPYKWTA-PEAASHGTFSTKSDVWSFGILLYEMFTYGQVPYPGMNNHEVYDQITAGYRMPCPAK  228 (261)
T ss_pred             hhhcCCccccc-cCCCCceEecC-HHHHccCCCCchhhHHHHHHHHHHHHcCCCCCCCcCCHHHHHHHHHhCCcCCCCCC
Confidence            97654222111 12345667888 6654      367999999876 4443 3222222111                11


Q ss_pred             HHHHHHHHHHhhcccCcCCCCCHHHHHHHHcc
Q 045577          333 ELVKCIEVGLLCVQQRIEDWPTMSSVLTMLSN  364 (392)
Q Consensus       333 ~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~L~~  364 (392)
                      ....+.+++.+|++.+|++||++.++++.|+.
T Consensus       229 ~~~~~~~~i~~~l~~~p~~Rpt~~~l~~~L~~  260 (261)
T cd05148         229 CPQEIYKIMLECWAAEPEDRPSFKALREELDN  260 (261)
T ss_pred             CCHHHHHHHHHHcCCCchhCcCHHHHHHHHhc
Confidence            22456788889999999999999999999975

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom

>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl

Probab=99.79  E-value=5.7e-20  Score=171.54  Aligned_cols=162  Identities=21%  Similarity=0.208  Sum_probs=116.9

Q ss_pred             CeeEEecCccCCCcChhhhh-----hhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEcCCCCCeEeee
Q 045577          200 EVFLMFEGIKLPDKSEFTCE-----FECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEINPNISDF  274 (392)
Q Consensus       200 ~~~lv~e~~~~~~l~~~~~~-----~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~~~~~~kl~DF  274 (392)
                      ..+++|||++++++......     ..+...+..+..++.|++.||.|||++   +|+||||||+||+++.++.+||+||
T Consensus        80 ~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Df  156 (272)
T cd05075          80 SPVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSSK---SFIHRDLAARNCMLNENMNVCVADF  156 (272)
T ss_pred             CcEEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHHC---CeeccccchhheEEcCCCCEEECCC
Confidence            57899999999988664321     112234555788999999999999998   8999999999999999999999999


Q ss_pred             eceEEeCCCCcce-eceeeecccccCchhHH------HHHHHhcCCCcc-eeec-ccccCCCCC----------------
Q 045577          275 GPARIFGDQTEEV-TGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIID-EQTKMKGPF----------------  329 (392)
Q Consensus       275 Gla~~~~~~~~~~-~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld-~~~~~~~~~----------------  329 (392)
                      |+++.+....... .....+++.|++ |+..      ...|+|+.|+++ +++. +...+.+..                
T Consensus       157 g~~~~~~~~~~~~~~~~~~~~~~~~~-pe~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~  235 (272)
T cd05075         157 GLSKKIYNGDYYRQGRIAKMPVKWIA-IESLADRVYTTKSDVWSFGVTMWEIATRGQTPYPGVENSEIYDYLRQGNRLKQ  235 (272)
T ss_pred             CcccccCcccceecCCcccCCcccCC-HHHccCCCcChHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCCCCCC
Confidence            9998764221111 112235567887 5543      478999999876 4444 322222211                


Q ss_pred             CHHHHHHHHHHHHhhcccCcCCCCCHHHHHHHHccC
Q 045577          330 SADELVKCIEVGLLCVQQRIEDWPTMSSVLTMLSNE  365 (392)
Q Consensus       330 ~~~~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~L~~~  365 (392)
                      .......+.+++.+|++.+|++||++.++++.|+..
T Consensus       236 ~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~~~  271 (272)
T cd05075         236 PPDCLDGLYSLMSSCWLLNPKDRPSFETLRCELEKA  271 (272)
T ss_pred             CCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence            111223567788899999999999999999999763

Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor

>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2

Probab=99.79  E-value=1.7e-19  Score=170.91  Aligned_cols=175  Identities=19%  Similarity=0.213  Sum_probs=120.4

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhcc----------ccchhhhhHHHHHHHhhhhcCcCCCCceeec
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECS----------KYSSYVTNILYGIARVILYLPEDSRLEIIHR  254 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~----------~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHr  254 (392)
                      |++.++.......++..+++|||++++++..........          .....+.+++.|++.||.|||+.   +++|+
T Consensus        78 ~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~---~i~H~  154 (296)
T cd05095          78 DPNIIRLLAVCITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSSL---NFVHR  154 (296)
T ss_pred             CCCcceEEEEEecCCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHHC---Ceecc
Confidence            344444433333356789999999999987754432211          12234788999999999999998   89999


Q ss_pred             ccccceeEEcCCCCCeEeeeeceEEeCCCC-cceeceeeecccccCchhHH------HHHHHhcCCCcc-eeec--cccc
Q 045577          255 DHKTSNVLLDAEINPNISDFGPARIFGDQT-EEVTGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIID--EQTK  324 (392)
Q Consensus       255 DlKp~NIll~~~~~~kl~DFGla~~~~~~~-~~~~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld--~~~~  324 (392)
                      ||||+||+++.++.+||+|||+++.+.... ........++..|++ |+..      .+.|+|++|+++ +++.  +..+
T Consensus       155 dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~-pe~~~~~~~~~~~DiwSlG~~l~el~~~~~~~p  233 (296)
T cd05095         155 DLATRNCLVGKNYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMS-WESILLGKFTTASDVWAFGVTLWEILTLCKEQP  233 (296)
T ss_pred             cCChheEEEcCCCCEEeccCcccccccCCcceeccCcCcCccccCC-HHHHhcCCccchhhhhHHHHHHHHHHHhCCCCC
Confidence            999999999999999999999987654211 111222334567888 5533      368999999876 3433  1111


Q ss_pred             CCCCC-----------------------CHHHHHHHHHHHHhhcccCcCCCCCHHHHHHHHc
Q 045577          325 MKGPF-----------------------SADELVKCIEVGLLCVQQRIEDWPTMSSVLTMLS  363 (392)
Q Consensus       325 ~~~~~-----------------------~~~~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~L~  363 (392)
                      +....                       +......+.+++.+|++.+|++||++.+|++.|+
T Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~  295 (296)
T cd05095         234 YSQLSDEQVIENTGEFFRDQGRQVYLPKPALCPDSLYKLMLSCWRRNAKERPSFQEIHATLL  295 (296)
T ss_pred             ccccChHHHHHHHHHHHhhccccccCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHHh
Confidence            11100                       1112245667888999999999999999999986

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit

>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6

Probab=99.79  E-value=9.8e-20  Score=169.46  Aligned_cols=176  Identities=19%  Similarity=0.235  Sum_probs=127.0

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhh---hhccccchhhhhHHHHHHHhhhhcCcCCCCceeeccccccee
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCE---FECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNV  261 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~---~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NI  261 (392)
                      |++.++.....+..+..++++||++++++......   .........+..++.|++.||.|||+.   +++|+||||+||
T Consensus        61 h~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~~~ni  137 (267)
T cd08228          61 HPNVIKYLDSFIEDNELNIVLELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHSR---RVMHRDIKPANV  137 (267)
T ss_pred             CcceeeeeeeEEECCeEEEEEEecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCCHHHE
Confidence            44444444444445678999999999988764322   112234555788999999999999998   899999999999


Q ss_pred             EEcCCCCCeEeeeeceEEeCCCCcceeceeeecccccCchhHH------HHHHHhcCCCcc-eeecccccCCCCC-----
Q 045577          262 LLDAEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIIDEQTKMKGPF-----  329 (392)
Q Consensus       262 ll~~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld~~~~~~~~~-----  329 (392)
                      +++.++.++|+|||++........ ......|+..|+| ||..      ...|+|+.|+++ +++.++.++....     
T Consensus       138 l~~~~~~~~l~d~g~~~~~~~~~~-~~~~~~~~~~~~a-PE~~~~~~~~~~~Di~slG~~l~el~~g~~p~~~~~~~~~~  215 (267)
T cd08228         138 FITATGVVKLGDLGLGRFFSSKTT-AAHSLVGTPYYMS-PERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLFS  215 (267)
T ss_pred             EEcCCCCEEECccccceeccchhH-HHhcCCCCccccC-hhhhccCCCCchhhHHHHHHHHHHHhcCCCCCccccccHHH
Confidence            999999999999999887652221 1122457888999 6654      367999999876 4544433322111     


Q ss_pred             --------------CHHHHHHHHHHHHhhcccCcCCCCCHHHHHHHHccC
Q 045577          330 --------------SADELVKCIEVGLLCVQQRIEDWPTMSSVLTMLSNE  365 (392)
Q Consensus       330 --------------~~~~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~L~~~  365 (392)
                                    .......+.+++.+|++.+|++||++.+|++.|++.
T Consensus       216 ~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~vl~~~~~~  265 (267)
T cd08228         216 LCQKIEQCDYPPLPTEHYSEKLRELVSMCIYPDPDQRPDIGYVHQIAKQM  265 (267)
T ss_pred             HHHHHhcCCCCCCChhhcCHHHHHHHHHHCCCCcccCcCHHHHHHHHHHh
Confidence                          112224567788899999999999999999999875

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase

>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N

Probab=99.79  E-value=8e-20  Score=175.72  Aligned_cols=169  Identities=20%  Similarity=0.147  Sum_probs=122.0

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEc
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLD  264 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~  264 (392)
                      |+++++.......++..|+||||++++++.....+  ....+..+..++.|++.||.|||+.   +++||||||+||+++
T Consensus        61 hp~i~~~~~~~~~~~~~~lv~E~~~~~~L~~~~~~--~~l~~~~~~~~~~qi~~al~~lH~~---~ivHrdlkp~Nill~  135 (324)
T cd05589          61 HPFLVNLFACFQTEDHVCFVMEYAAGGDLMMHIHT--DVFSEPRAVFYAACVVLGLQYLHEN---KIVYRDLKLDNLLLD  135 (324)
T ss_pred             CCChhceeeEEEcCCEEEEEEcCCCCCcHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHHhC---CeEecCCCHHHeEEC
Confidence            55555554443345678999999999988664432  2234555788999999999999998   899999999999999


Q ss_pred             CCCCCeEeeeeceEEeCCCCcceeceeeecccccCchhHH------HHHHHhcCCCcc-eeecccccCCCCCCHHH----
Q 045577          265 AEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIIDEQTKMKGPFSADE----  333 (392)
Q Consensus       265 ~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld~~~~~~~~~~~~~----  333 (392)
                      .++.+||+|||+++..... ........|++.|+| ||..      .+.|+|+.|+++ +++.+..++.+....+.    
T Consensus       136 ~~~~~kL~Dfg~~~~~~~~-~~~~~~~~g~~~y~a-PE~~~~~~~~~~~DiwslG~il~el~~G~~pf~~~~~~~~~~~i  213 (324)
T cd05589         136 TEGFVKIADFGLCKEGMGF-GDRTSTFCGTPEFLA-PEVLTETSYTRAVDWWGLGVLIYEMLVGESPFPGDDEEEVFDSI  213 (324)
T ss_pred             CCCcEEeCcccCCccCCCC-CCcccccccCccccC-HhHhcCCCCCcccchhhHHHHHHHHHhCCCCCCCCCHHHHHHHH
Confidence            9999999999998753211 122234678999999 7654      367999999876 56665444433221111    


Q ss_pred             -----------HHHHHHHHHhhcccCcCCCCC-----HHHHHH
Q 045577          334 -----------LVKCIEVGLLCVQQRIEDWPT-----MSSVLT  360 (392)
Q Consensus       334 -----------~~~~~~i~~~Cl~~dp~~RPs-----m~eVv~  360 (392)
                                 ...+.+++.+|++.||++||+     +.++++
T Consensus       214 ~~~~~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~l~~  256 (324)
T cd05589         214 VNDEVRYPRFLSREAISIMRRLLRRNPERRLGSGEKDAEDVKK  256 (324)
T ss_pred             HhCCCCCCCCCCHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhh
Confidence                       224567888999999999994     555554

Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved

>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor

Probab=99.79  E-value=1.5e-19  Score=170.54  Aligned_cols=165  Identities=18%  Similarity=0.272  Sum_probs=118.5

Q ss_pred             CCCCeeEEecCccCCCcChhhhhhhc---------cccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEcCCC
Q 045577          197 GDGEVFLMFEGIKLPDKSEFTCEFEC---------SKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEI  267 (392)
Q Consensus       197 ~~~~~~lv~e~~~~~~l~~~~~~~~~---------~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~~~~  267 (392)
                      .++..|++|||++++++.....+..-         ......+.+++.|++.||.|||++   +++||||||+||+++.++
T Consensus        80 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dikp~nili~~~~  156 (288)
T cd05061          80 KGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAK---KFVHRDLAARNCMVAHDF  156 (288)
T ss_pred             CCCCcEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CCcCCCCChheEEEcCCC
Confidence            34578999999999999876543210         112234678999999999999998   899999999999999999


Q ss_pred             CCeEeeeeceEEeCCCC-cceeceeeecccccCchhHH------HHHHHhcCCCcc-eeec-ccccCCCCC---------
Q 045577          268 NPNISDFGPARIFGDQT-EEVTGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIID-EQTKMKGPF---------  329 (392)
Q Consensus       268 ~~kl~DFGla~~~~~~~-~~~~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld-~~~~~~~~~---------  329 (392)
                      .+|++|||+++...... ........++..|++ ||..      ...|+|+.|+++ +++. +...+.+..         
T Consensus       157 ~~~L~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~-pE~~~~~~~~~~~DvwslG~~l~el~~~~~~p~~~~~~~~~~~~~~  235 (288)
T cd05061         157 TVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMA-PESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVM  235 (288)
T ss_pred             cEEECcCCccccccccccccccCCCcccccccC-HHHhccCCCChHhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHH
Confidence            99999999987653211 111112234667888 6654      367999999876 3443 222221111         


Q ss_pred             -------CHHHHHHHHHHHHhhcccCcCCCCCHHHHHHHHccC
Q 045577          330 -------SADELVKCIEVGLLCVQQRIEDWPTMSSVLTMLSNE  365 (392)
Q Consensus       330 -------~~~~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~L~~~  365 (392)
                             +......+.+++.+|++.+|++||++.++++.|++.
T Consensus       236 ~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~~  278 (288)
T cd05061         236 DGGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDD  278 (288)
T ss_pred             cCCCCCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHhh
Confidence                   111124577888899999999999999999999875

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta

>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=99.79  E-value=1.1e-19  Score=171.15  Aligned_cols=163  Identities=18%  Similarity=0.202  Sum_probs=118.7

Q ss_pred             CCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEcCCCCCeEeeeeceE
Q 045577          199 GEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEINPNISDFGPAR  278 (392)
Q Consensus       199 ~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~~~~~~kl~DFGla~  278 (392)
                      ...+++|||++++++.....+..-......+..++.|++.||.|||+.   +++||||||+||+++.++.+||+|||+++
T Consensus        81 ~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~i~~~i~~aL~~lH~~---gi~H~dlkp~Nil~~~~~~~~l~dfg~~~  157 (284)
T cd05079          81 NGIKLIMEFLPSGSLKEYLPRNKNKINLKQQLKYAVQICKGMDYLGSR---QYVHRDLAARNVLVESEHQVKIGDFGLTK  157 (284)
T ss_pred             CceEEEEEccCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecccchheEEEcCCCCEEECCCcccc
Confidence            457999999999999776544322234555788999999999999998   89999999999999999999999999998


Q ss_pred             EeCCCCcc--eeceeeecccccCchhHH------HHHHHhcCCCcc-eeecccccCC-----------------------
Q 045577          279 IFGDQTEE--VTGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIIDEQTKMK-----------------------  326 (392)
Q Consensus       279 ~~~~~~~~--~~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld~~~~~~-----------------------  326 (392)
                      ........  ......++..|+| ||..      ...|+|+.|+++ +++.......                       
T Consensus       158 ~~~~~~~~~~~~~~~~~~~~y~a-pE~~~~~~~~~~~Di~slG~il~ellt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (284)
T cd05079         158 AIETDKEYYTVKDDLDSPVFWYA-PECLIQSKFYIASDVWSFGVTLYELLTYCDSESSPMTLFLKMIGPTHGQMTVTRLV  236 (284)
T ss_pred             ccccCccceeecCCCCCCccccC-HHHhccCCCCccccchhhhhhhhhhhcCCCCCccccchhhhhcccccccccHHHHH
Confidence            65422111  1122345667888 6654      357999999876 4443211000                       


Q ss_pred             --------CCCCHHHHHHHHHHHHhhcccCcCCCCCHHHHHHHHccC
Q 045577          327 --------GPFSADELVKCIEVGLLCVQQRIEDWPTMSSVLTMLSNE  365 (392)
Q Consensus       327 --------~~~~~~~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~L~~~  365 (392)
                              .+........+.+++..|++.+|++||++.++++.|+..
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~~~  283 (284)
T cd05079         237 RVLEEGKRLPRPPNCPEEVYQLMRKCWEFQPSKRTTFQNLIEGFEAI  283 (284)
T ss_pred             HHHHcCccCCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHHHHhh
Confidence                    000111234677888999999999999999999999764

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a

>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src

Probab=99.79  E-value=2.3e-19  Score=167.03  Aligned_cols=164  Identities=17%  Similarity=0.233  Sum_probs=122.6

Q ss_pred             CCCeeEEecCccCCCcChhhhhhhc-cccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEcCCCCCeEeeeec
Q 045577          198 DGEVFLMFEGIKLPDKSEFTCEFEC-SKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEINPNISDFGP  276 (392)
Q Consensus       198 ~~~~~lv~e~~~~~~l~~~~~~~~~-~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~~~~~~kl~DFGl  276 (392)
                      ....+++|||++++++.....+..+ ......+..++.|++.||.|||+.   +++||||||+||+++.++.+||+|||.
T Consensus        72 ~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~---~i~H~dl~p~Nill~~~~~~~L~dfg~  148 (262)
T cd05071          72 EEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGL  148 (262)
T ss_pred             CCCcEEEEEcCCCCcHHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHHC---CccccccCcccEEEcCCCcEEeccCCc
Confidence            3457999999999998776654322 234555788999999999999998   899999999999999999999999999


Q ss_pred             eEEeCCCCcceeceeeecccccCchhHH------HHHHHhcCCCcc-eeec-ccccCCCCC----------------CHH
Q 045577          277 ARIFGDQTEEVTGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIID-EQTKMKGPF----------------SAD  332 (392)
Q Consensus       277 a~~~~~~~~~~~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld-~~~~~~~~~----------------~~~  332 (392)
                      ++.+............++..|++ ||..      ...|+|+.|+++ +++. +...+....                ..+
T Consensus       149 ~~~~~~~~~~~~~~~~~~~~y~~-PE~~~~~~~~~~~DvwslG~~l~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~~~  227 (262)
T cd05071         149 ARLIEDNEYTARQGAKFPIKWTA-PEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPE  227 (262)
T ss_pred             eeeccccccccccCCcccceecC-HhHhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHhcCCCCCCccc
Confidence            98765322222222345677999 6654      368999999876 4444 332222211                122


Q ss_pred             HHHHHHHHHHhhcccCcCCCCCHHHHHHHHccC
Q 045577          333 ELVKCIEVGLLCVQQRIEDWPTMSSVLTMLSNE  365 (392)
Q Consensus       333 ~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~L~~~  365 (392)
                      ....+.+++..|++.+|++||++.++++.|+..
T Consensus       228 ~~~~l~~li~~~l~~~p~~Rp~~~~~~~~l~~~  260 (262)
T cd05071         228 CPESLHDLMCQCWRKEPEERPTFEYLQAFLEDY  260 (262)
T ss_pred             cCHHHHHHHHHHccCCcccCCCHHHHHHHHHHh
Confidence            335677899999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo

>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors

Probab=99.79  E-value=1.2e-19  Score=169.23  Aligned_cols=177  Identities=21%  Similarity=0.249  Sum_probs=124.8

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEc
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLD  264 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~  264 (392)
                      |+++++.......++..+++|||++++++...............+..++.|++.||.|||+.   +++|+||||+||+++
T Consensus        64 h~ni~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~l~~al~~lH~~---g~~H~dl~p~nili~  140 (269)
T cd05065          64 HPNIIHLEGVVTKSRPVMIITEFMENGALDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLSEM---NYVHRDLAARNILVN  140 (269)
T ss_pred             CcCcceEEEEECCCCceEEEEecCCCCcHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccChheEEEc
Confidence            55555555444456678999999999988765544322334455788999999999999998   899999999999999


Q ss_pred             CCCCCeEeeeeceEEeCCCCcc--eeceee--ecccccCchhHH------HHHHHhcCCCcc-eeec-ccccCCCCC---
Q 045577          265 AEINPNISDFGPARIFGDQTEE--VTGRVI--GTQTLKTVPELL------QAWKLWSEGDPM-EIID-EQTKMKGPF---  329 (392)
Q Consensus       265 ~~~~~kl~DFGla~~~~~~~~~--~~~~~~--gt~~y~a~~~~~------~~~diws~G~v~-~~ld-~~~~~~~~~---  329 (392)
                      .++.+|++|||+++........  ......  .+..|++ ||..      ...|+|+.|+++ +++. +..++....   
T Consensus       141 ~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~y~~-PE~~~~~~~~~~~DvwslG~~l~e~l~~g~~p~~~~~~~~  219 (269)
T cd05065         141 SNLVCKVSDFGLSRFLEDDTSDPTYTSSLGGKIPIRWTA-PEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQD  219 (269)
T ss_pred             CCCcEEECCCccccccccCccccccccccCCCcceeecC-HhHhccCcccchhhhhhhHHHHHHHhcCCCCCCCCCCHHH
Confidence            9999999999998765422111  111111  1346888 6654      367999999876 4443 332221111   


Q ss_pred             -------------CHHHHHHHHHHHHhhcccCcCCCCCHHHHHHHHccC
Q 045577          330 -------------SADELVKCIEVGLLCVQQRIEDWPTMSSVLTMLSNE  365 (392)
Q Consensus       330 -------------~~~~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~L~~~  365 (392)
                                   +.+....+.+++..|++.+|++||+|.+|+++|+..
T Consensus       220 ~~~~i~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~  268 (269)
T cd05065         220 VINAIEQDYRLPPPMDCPTALHQLMLDCWQKDRNARPKFGQIVSTLDKM  268 (269)
T ss_pred             HHHHHHcCCcCCCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence                         111223566788899999999999999999999764

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr

>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]

Probab=99.79  E-value=4.7e-20  Score=179.21  Aligned_cols=169  Identities=21%  Similarity=0.216  Sum_probs=129.1

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEc
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLD  264 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~  264 (392)
                      |++.+...+....+.+.++|.||+.+ ++....... |...++.+..|+.++..||.|||+.   +|+|||+||.|||++
T Consensus        60 Hpniv~m~esfEt~~~~~vVte~a~g-~L~~il~~d-~~lpEe~v~~~a~~LVsaL~yLhs~---rilhrd~kPqniLl~  134 (808)
T KOG0597|consen   60 HPNIVEMLESFETSAHLWVVTEYAVG-DLFTILEQD-GKLPEEQVRAIAYDLVSALYYLHSN---RILHRDMKPQNILLE  134 (808)
T ss_pred             CcchhhHHHhhcccceEEEEehhhhh-hHHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHHhc---CcccccCCcceeeec
Confidence            88888877777667899999999997 777655444 4456666899999999999999999   899999999999999


Q ss_pred             CCCCCeEeeeeceEEeCCCCcceeceeeecccccCchhHH------HHHHHhcCCCcc-eeecccccCCCCC--------
Q 045577          265 AEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIIDEQTKMKGPF--------  329 (392)
Q Consensus       265 ~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld~~~~~~~~~--------  329 (392)
                      +.+.+|++|||+|+.++..+.. .+.+.||+.||| ||+.      ...|+|+.||++ |++.+++++....        
T Consensus       135 ~~~~~KlcdFg~Ar~m~~~t~v-ltsikGtPlYmA-PElv~e~pyd~~sDlWslGcilYE~~~G~PPF~a~si~~Lv~~I  212 (808)
T KOG0597|consen  135 KGGTLKLCDFGLARAMSTNTSV-LTSIKGTPLYMA-PELVEEQPYDHTSDLWSLGCILYELYVGQPPFYARSITQLVKSI  212 (808)
T ss_pred             CCCceeechhhhhhhcccCcee-eeeccCcccccC-HHHHcCCCccchhhHHHHHHHHHHHhcCCCCchHHHHHHHHHHH
Confidence            9999999999999988754433 344789999999 7765      378999999987 5555654442211        


Q ss_pred             -------CHHHHHHHHHHHHhhcccCcCCCCCHHHHHH
Q 045577          330 -------SADELVKCIEVGLLCVQQRIEDWPTMSSVLT  360 (392)
Q Consensus       330 -------~~~~~~~~~~i~~~Cl~~dp~~RPsm~eVv~  360 (392)
                             +......++.+..-.++.||.+|-+..+++.
T Consensus       213 ~~d~v~~p~~~S~~f~nfl~gLL~kdP~~RltW~~Ll~  250 (808)
T KOG0597|consen  213 LKDPVKPPSTASSSFVNFLQGLLIKDPAQRLTWTDLLG  250 (808)
T ss_pred             hcCCCCCcccccHHHHHHHHHHhhcChhhcccHHHHhc
Confidence                   1111223344555677788888887777654

>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

Probab=99.79  E-value=1.1e-19  Score=174.31  Aligned_cols=170  Identities=20%  Similarity=0.135  Sum_probs=123.2

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEc
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLD  264 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~  264 (392)
                      |++.++........+..|++|||++++++.....+.. ...+..+..++.|++.||.|||+.   +++||||||+||+++
T Consensus        55 h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~-~l~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~Nill~  130 (318)
T cd05570          55 HPFLTQLHSCFQTKDRLFFVMEYVNGGDLMFHIQRSG-RFDEPRARFYAAEIVLGLQFLHER---GIIYRDLKLDNVLLD  130 (318)
T ss_pred             CCCccceeeEEEcCCEEEEEEcCCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHhC---CeEccCCCHHHeEEC
Confidence            4444444433333567899999999999876554432 234555788999999999999998   899999999999999


Q ss_pred             CCCCCeEeeeeceEEeCCCCcceeceeeecccccCchhHH------HHHHHhcCCCcc-eeecccccCCCCCCHH-----
Q 045577          265 AEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIIDEQTKMKGPFSAD-----  332 (392)
Q Consensus       265 ~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld~~~~~~~~~~~~-----  332 (392)
                      .++.+||+|||+++..... ........|++.|+| ||+.      .+.|+|+.|+++ +++.+..++......+     
T Consensus       131 ~~~~~kl~Dfg~~~~~~~~-~~~~~~~~g~~~y~a-PE~~~~~~~~~~~DiwslGvil~~l~~G~~pf~~~~~~~~~~~i  208 (318)
T cd05570         131 SEGHIKIADFGMCKEGILG-GVTTSTFCGTPDYIA-PEILSYQPYGPAVDWWALGVLLYEMLAGQSPFEGDDEDELFQSI  208 (318)
T ss_pred             CCCcEEecccCCCeecCcC-CCcccceecCccccC-HHHhcCCCCCcchhhhhHHHHHHHHhhCCCCCCCCCHHHHHHHH
Confidence            9999999999998753211 122233578999999 7765      367999999876 5555544443221111     


Q ss_pred             ----------HHHHHHHHHHhhcccCcCCCCCH-----HHHHH
Q 045577          333 ----------ELVKCIEVGLLCVQQRIEDWPTM-----SSVLT  360 (392)
Q Consensus       333 ----------~~~~~~~i~~~Cl~~dp~~RPsm-----~eVv~  360 (392)
                                ....+.+++..|++.||++||++     .++++
T Consensus       209 ~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~~~~~~~ll~  251 (318)
T cd05570         209 LEDEVRYPRWLSKEAKSILKSFLTKNPEKRLGCLPTGEQDIKG  251 (318)
T ss_pred             HcCCCCCCCcCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHhc
Confidence                      12345678889999999999998     77765

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re

>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase

Probab=99.79  E-value=2.1e-19  Score=168.54  Aligned_cols=173  Identities=23%  Similarity=0.232  Sum_probs=119.4

Q ss_pred             CccccccCcCCCCCeeEEecCccCCCcChhhhhhhc------cccchhhhhHHHHHHHhhhhcCcCCCCceeecccccce
Q 045577          187 GCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFEC------SKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSN  260 (392)
Q Consensus       187 GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~------~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~N  260 (392)
                      +-++......+.+..+++|||++++++.....+...      ......++.++.||+.||.|||+.   +++||||||+|
T Consensus        70 ~i~~~~~~~~~~~~~~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~n  146 (277)
T cd05036          70 NIVRLIGVSFERLPRFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEEN---HFIHRDIAARN  146 (277)
T ss_pred             CEeeEEEEEccCCCcEEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccchhe
Confidence            333333333334568999999999998875544321      123445788999999999999998   89999999999


Q ss_pred             eEEcCCC---CCeEeeeeceEEeCCCCc-ceeceeeecccccCchhHH------HHHHHhcCCCcc-eeec-ccccCCCC
Q 045577          261 VLLDAEI---NPNISDFGPARIFGDQTE-EVTGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIID-EQTKMKGP  328 (392)
Q Consensus       261 Ill~~~~---~~kl~DFGla~~~~~~~~-~~~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld-~~~~~~~~  328 (392)
                      |+++.++   .+||+|||+++....... ........+..|++ ||..      .+.|+|++|+++ +++. +..++...
T Consensus       147 il~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~a-PE~~~~~~~~~~~DiwslG~il~el~~~g~~pf~~~  225 (277)
T cd05036         147 CLLTCKGPGRVAKIADFGMARDIYRASYYRKGGRAMLPIKWMP-PEAFLDGIFTSKTDVWSFGVLLWEIFSLGYMPYPGR  225 (277)
T ss_pred             EEEeccCCCcceEeccCccccccCCccceecCCCCCccHhhCC-HHHHhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCC
Confidence            9998654   589999999986532111 11112233467888 6654      378999999876 4443 43332222


Q ss_pred             CCHH----------------HHHHHHHHHHhhcccCcCCCCCHHHHHHHHc
Q 045577          329 FSAD----------------ELVKCIEVGLLCVQQRIEDWPTMSSVLTMLS  363 (392)
Q Consensus       329 ~~~~----------------~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~L~  363 (392)
                      ...+                ....+.+++.+|++.+|++||++.+|++.|+
T Consensus       226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~cl~~~p~~Rps~~~vl~~l~  276 (277)
T cd05036         226 TNQEVMEFVTGGGRLDPPKGCPGPVYRIMTDCWQHTPEDRPNFATILERIQ  276 (277)
T ss_pred             CHHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHhh
Confidence            1111                1234567888999999999999999999885

Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well

>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4

Probab=99.79  E-value=9.5e-20  Score=173.41  Aligned_cols=163  Identities=19%  Similarity=0.242  Sum_probs=119.4

Q ss_pred             CCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEcCCCCCeEeeeece
Q 045577          198 DGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEINPNISDFGPA  277 (392)
Q Consensus       198 ~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~~~~~~kl~DFGla  277 (392)
                      ....++++||++++++...............+..++.|++.||.|||+.   +|+||||||+||+++.++.+||+|||++
T Consensus        80 ~~~~~~v~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~---~ivH~dikp~Nill~~~~~~kL~Dfg~~  156 (303)
T cd05110          80 SPTIQLVTQLMPHGCLLDYVHEHKDNIGSQLLLNWCVQIAKGMMYLEER---RLVHRDLAARNVLVKSPNHVKITDFGLA  156 (303)
T ss_pred             CCCceeeehhcCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHhhc---CeeccccccceeeecCCCceEEcccccc
Confidence            3456899999999988765544333334555788999999999999998   8999999999999999999999999999


Q ss_pred             EEeCCCCc-ceeceeeecccccCchhHH------HHHHHhcCCCcc-eeec-ccccCCCCCCHH----------------
Q 045577          278 RIFGDQTE-EVTGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIID-EQTKMKGPFSAD----------------  332 (392)
Q Consensus       278 ~~~~~~~~-~~~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld-~~~~~~~~~~~~----------------  332 (392)
                      +.+..... .......++..|++ |+..      ...|+|+.|+++ +++. ++.++.+. ...                
T Consensus       157 ~~~~~~~~~~~~~~~~~~~~y~~-PE~~~~~~~~~~~DiwslG~~l~el~t~g~~p~~~~-~~~~~~~~~~~~~~~~~~~  234 (303)
T cd05110         157 RLLEGDEKEYNADGGKMPIKWMA-LECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGI-PTREIPDLLEKGERLPQPP  234 (303)
T ss_pred             ccccCcccccccCCCccccccCC-HHHhccCCCChHHHHHHHHHHHHHHHhCCCCCCCCC-CHHHHHHHHHCCCCCCCCC
Confidence            87642211 11222345678998 6654      367999999865 4443 32222221 111                


Q ss_pred             -HHHHHHHHHHhhcccCcCCCCCHHHHHHHHccC
Q 045577          333 -ELVKCIEVGLLCVQQRIEDWPTMSSVLTMLSNE  365 (392)
Q Consensus       333 -~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~L~~~  365 (392)
                       ....+.+++..|+..+|++||++.++++.|+..
T Consensus       235 ~~~~~~~~li~~c~~~~p~~Rp~~~~l~~~l~~~  268 (303)
T cd05110         235 ICTIDVYMVMVKCWMIDADSRPKFKELAAEFSRM  268 (303)
T ss_pred             CCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence             123556788899999999999999999998764

Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin

>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3

Probab=99.79  E-value=2.9e-19  Score=172.54  Aligned_cols=177  Identities=22%  Similarity=0.233  Sum_probs=124.8

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhh----------cc-----ccchhhhhHHHHHHHhhhhcCcCCCC
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFE----------CS-----KYSSYVTNILYGIARVILYLPEDSRL  249 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~----------~~-----~~~~~~~~i~~~ia~gL~yLH~~~~~  249 (392)
                      |++.++.......++..+++|||++++++....++..          |.     .....++.++.|++.||.|||+.   
T Consensus        77 h~~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~---  153 (334)
T cd05100          77 HKNIINLLGACTQDGPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQ---  153 (334)
T ss_pred             CCCeeeeeEEEccCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHC---
Confidence            4455554444444567899999999999887665432          11     12233677899999999999998   


Q ss_pred             ceeecccccceeEEcCCCCCeEeeeeceEEeCCCCc-ceeceeeecccccCchhHH------HHHHHhcCCCcc-eeec-
Q 045577          250 EIIHRDHKTSNVLLDAEINPNISDFGPARIFGDQTE-EVTGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIID-  320 (392)
Q Consensus       250 ~iiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~~-~~~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld-  320 (392)
                      +++||||||+||+++.++.+||+|||+++....... .......++..|++ ||..      ...|+|++|+++ +++. 
T Consensus       154 givH~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~a-PE~~~~~~~~~~~Di~slG~il~el~~~  232 (334)
T cd05100         154 KCIHRDLAARNVLVTEDNVMKIADFGLARDVHNIDYYKKTTNGRLPVKWMA-PEALFDRVYTHQSDVWSFGVLLWEIFTL  232 (334)
T ss_pred             CeeccccccceEEEcCCCcEEECCcccceecccccccccccCCCcCceEcC-HHHhccCCcCchhhhHHHHHHHHHHHhc
Confidence            899999999999999999999999999987542211 11122234567898 6654      368999999876 4443 


Q ss_pred             ccccCCCC----------------CCHHHHHHHHHHHHhhcccCcCCCCCHHHHHHHHccC
Q 045577          321 EQTKMKGP----------------FSADELVKCIEVGLLCVQQRIEDWPTMSSVLTMLSNE  365 (392)
Q Consensus       321 ~~~~~~~~----------------~~~~~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~L~~~  365 (392)
                      +...+.+.                .+......+.+++..|++.+|++||++.++++.|+..
T Consensus       233 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~ell~~l~~~  293 (334)
T cd05100         233 GGSPYPGIPVEELFKLLKEGHRMDKPANCTHELYMIMRECWHAVPSQRPTFKQLVEDLDRV  293 (334)
T ss_pred             CCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHH
Confidence            22222111                1111223566788899999999999999999999865

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases

Probab=99.79  E-value=8.6e-20  Score=170.59  Aligned_cols=175  Identities=19%  Similarity=0.180  Sum_probs=122.3

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhc---------------cccchhhhhHHHHHHHhhhhcCcCCCC
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFEC---------------SKYSSYVTNILYGIARVILYLPEDSRL  249 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~---------------~~~~~~~~~i~~~ia~gL~yLH~~~~~  249 (392)
                      |++.++........+..+++|||++++++.....+...               ......+..++.|++.||.|||+.   
T Consensus        55 h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~~---  131 (270)
T cd05047          55 HPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---  131 (270)
T ss_pred             CCCeeeEEEEEecCCCceEEEEeCCCCcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHHC---
Confidence            44444444443445678999999999988775543221               123445788999999999999997   


Q ss_pred             ceeecccccceeEEcCCCCCeEeeeeceEEeCCCCcceeceeeecccccCchhHH------HHHHHhcCCCcc-eeec-c
Q 045577          250 EIIHRDHKTSNVLLDAEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIID-E  321 (392)
Q Consensus       250 ~iiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld-~  321 (392)
                      +++||||||+||+++.++.+|++|||++......  ........+..|+| ||..      .+.|+|++|+++ +++. +
T Consensus       132 ~i~H~dikp~nili~~~~~~kl~dfgl~~~~~~~--~~~~~~~~~~~y~a-pE~~~~~~~~~~~Di~slG~il~el~~~g  208 (270)
T cd05047         132 QFIHRDLAARNILVGENYVAKIADFGLSRGQEVY--VKKTMGRLPVRWMA-IESLNYSVYTTNSDVWSYGVLLWEIVSLG  208 (270)
T ss_pred             CEeecccccceEEEcCCCeEEECCCCCccccchh--hhccCCCCccccCC-hHHHccCCCCchhhHHHHHHHHHHHHcCC
Confidence            8999999999999999999999999998532211  01111223456888 6654      368999999876 4443 3


Q ss_pred             cccCCCCC----------------CHHHHHHHHHHHHhhcccCcCCCCCHHHHHHHHccC
Q 045577          322 QTKMKGPF----------------SADELVKCIEVGLLCVQQRIEDWPTMSSVLTMLSNE  365 (392)
Q Consensus       322 ~~~~~~~~----------------~~~~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~L~~~  365 (392)
                      ...+.+..                .......+.+++..|++.+|.+||++.++++.|+..
T Consensus       209 ~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~l~~~  268 (270)
T cd05047         209 GTPYCGMTCAELYEKLPQGYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRM  268 (270)
T ss_pred             CCCccccCHHHHHHHHhCCCCCCCCCcCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHh
Confidence            22221111                111223567888899999999999999999999764

Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l

>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

Probab=99.79  E-value=1.9e-19  Score=166.88  Aligned_cols=164  Identities=21%  Similarity=0.251  Sum_probs=121.1

Q ss_pred             CCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEcCCCCCeEeeeec
Q 045577          197 GDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEINPNISDFGP  276 (392)
Q Consensus       197 ~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~~~~~~kl~DFGl  276 (392)
                      .+...+++|||+.++++........ ...+..+..++.|++.||.|||..   +++|+||||+||+++.++.+||+|||+
T Consensus        66 ~~~~~~~v~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lh~~---~i~H~di~p~nili~~~~~~kl~df~~  141 (257)
T cd05060          66 KGEPLMLVMELAPLGPLLKYLKKRR-EIPVSDLKELAHQVAMGMAYLESK---HFVHRDLAARNVLLVNRHQAKISDFGM  141 (257)
T ss_pred             cCCceEEEEEeCCCCcHHHHHHhCC-CCCHHHHHHHHHHHHHHHHHHhhc---CeeccCcccceEEEcCCCcEEeccccc
Confidence            3456899999999998877655443 334555889999999999999998   899999999999999999999999999


Q ss_pred             eEEeCCCCccee--ceeeecccccCchhHH------HHHHHhcCCCcc-eeec-ccccCCCCC----------------C
Q 045577          277 ARIFGDQTEEVT--GRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIID-EQTKMKGPF----------------S  330 (392)
Q Consensus       277 a~~~~~~~~~~~--~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld-~~~~~~~~~----------------~  330 (392)
                      ++..........  ....++..|++ ||..      ...|+|++|+++ +++. +.+++....                +
T Consensus       142 ~~~~~~~~~~~~~~~~~~~~~~y~a-PE~~~~~~~~~~~Di~slG~~l~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~  220 (257)
T cd05060         142 SRALGAGSDYYRATTAGRWPLKWYA-PECINYGKFSSKSDVWSYGVTLWEAFSYGAKPYGEMKGAEVIAMLESGERLPRP  220 (257)
T ss_pred             cceeecCCcccccccCccccccccC-HHHhcCCCCCccchHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHcCCcCCCC
Confidence            987642221111  11223457888 6654      368999999876 4543 433322211                1


Q ss_pred             HHHHHHHHHHHHhhcccCcCCCCCHHHHHHHHccC
Q 045577          331 ADELVKCIEVGLLCVQQRIEDWPTMSSVLTMLSNE  365 (392)
Q Consensus       331 ~~~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~L~~~  365 (392)
                      ......+.+++.+|++.+|++||++.++++.|++.
T Consensus       221 ~~~~~~l~~li~~cl~~~p~~Rp~~~~l~~~l~~~  255 (257)
T cd05060         221 EECPQEIYSIMLSCWKYRPEDRPTFSELESTFRRD  255 (257)
T ss_pred             CCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHhc
Confidence            11224566888999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi

>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2

Probab=99.79  E-value=1.6e-19  Score=171.96  Aligned_cols=174  Identities=20%  Similarity=0.181  Sum_probs=121.0

Q ss_pred             CCccccccCcCCCCCeeEEecCccCCCcChhhhhhhc---------------cccchhhhhHHHHHHHhhhhcCcCCCCc
Q 045577          186 GGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFEC---------------SKYSSYVTNILYGIARVILYLPEDSRLE  250 (392)
Q Consensus       186 ~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~---------------~~~~~~~~~i~~~ia~gL~yLH~~~~~~  250 (392)
                      ++-++.......++..|++|||++++++.....+...               ......++.++.|++.||.|||+.   +
T Consensus        68 ~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~---g  144 (303)
T cd05088          68 PNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---Q  144 (303)
T ss_pred             CCcceEEEEECCCCCceEEEEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHhC---C
Confidence            3333333333445678999999999988775543321               123445788999999999999998   8


Q ss_pred             eeecccccceeEEcCCCCCeEeeeeceEEeCCCCcceeceeeecccccCchhHH------HHHHHhcCCCcc-eeec-cc
Q 045577          251 IIHRDHKTSNVLLDAEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIID-EQ  322 (392)
Q Consensus       251 iiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld-~~  322 (392)
                      ++||||||+||+++.++.+||+|||+++.....  .......++..|++ ||..      .+.|+|+.|+++ +++. +.
T Consensus       145 i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~--~~~~~~~~~~~y~a-PE~~~~~~~~~~~Di~slG~il~ellt~g~  221 (303)
T cd05088         145 FIHRDLAARNILVGENYVAKIADFGLSRGQEVY--VKKTMGRLPVRWMA-IESLNYSVYTTNSDVWSYGVLLWEIVSLGG  221 (303)
T ss_pred             ccccccchheEEecCCCcEEeCccccCcccchh--hhcccCCCcccccC-HHHHhccCCcccccchhhhhHHHHHHhcCC
Confidence            999999999999999999999999998642210  11111223567888 6653      367999999877 4443 33


Q ss_pred             ccCCCCC----------------CHHHHHHHHHHHHhhcccCcCCCCCHHHHHHHHccC
Q 045577          323 TKMKGPF----------------SADELVKCIEVGLLCVQQRIEDWPTMSSVLTMLSNE  365 (392)
Q Consensus       323 ~~~~~~~----------------~~~~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~L~~~  365 (392)
                      .++....                +......+.+++.+|++.+|++||++.+++++|+..
T Consensus       222 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~l~~~  280 (303)
T cd05088         222 TPYCGMTCAELYEKLPQGYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRM  280 (303)
T ss_pred             CCcccCChHHHHHHHhcCCcCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence            3322111                111123566788899999999999999999988753

Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A

>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases

Probab=99.79  E-value=2.6e-19  Score=165.29  Aligned_cols=175  Identities=23%  Similarity=0.233  Sum_probs=126.1

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhh--------hccccchhhhhHHHHHHHhhhhcCcCCCCceeeccc
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEF--------ECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDH  256 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~--------~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDl  256 (392)
                      |++.++.......++..+++|||++++++.......        .....+..+..++.|++.||.|||+.   +++|+||
T Consensus        55 ~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~---~i~H~di  131 (262)
T cd00192          55 HPNVVRLLGVCTEEEPLYLVLEYMEGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASK---KFVHRDL  131 (262)
T ss_pred             CCChheeeeeecCCCceEEEEEeccCCcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHcC---CcccCcc
Confidence            334444333333356789999999999987755443        13335666899999999999999998   8999999


Q ss_pred             ccceeEEcCCCCCeEeeeeceEEeCCCC-cceeceeeecccccCchhHH------HHHHHhcCCCcc-eeecc-cccCCC
Q 045577          257 KTSNVLLDAEINPNISDFGPARIFGDQT-EEVTGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIIDE-QTKMKG  327 (392)
Q Consensus       257 Kp~NIll~~~~~~kl~DFGla~~~~~~~-~~~~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld~-~~~~~~  327 (392)
                      ||+||+++.++.+||+|||.+....... ........++..|+| ||..      ...|+|+.|+++ +++.. ..++..
T Consensus       132 ~p~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~a-PE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~  210 (262)
T cd00192         132 AARNCLVGEDLVVKISDFGLSRDVYDDDYYRKKTGGKLPIRWMA-PESLKDGIFTSKSDVWSFGVLLWEIFTLGATPYPG  210 (262)
T ss_pred             CcceEEECCCCcEEEcccccccccccccccccccCCCcCccccC-HHHhccCCcchhhccHHHHHHHHHHHhcCCCCCCC
Confidence            9999999999999999999998765321 112233456788999 6654      367999999876 34432 222221


Q ss_pred             CC----------------CHHHHHHHHHHHHhhcccCcCCCCCHHHHHHHHc
Q 045577          328 PF----------------SADELVKCIEVGLLCVQQRIEDWPTMSSVLTMLS  363 (392)
Q Consensus       328 ~~----------------~~~~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~L~  363 (392)
                      ..                +......+.+++..|++.+|++||++.++++.|+
T Consensus       211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~  262 (262)
T cd00192         211 LSNEEVLEYLRKGYRLPKPEYCPDELYELMLSCWQLDPEDRPTFSELVERLE  262 (262)
T ss_pred             CCHHHHHHHHHcCCCCCCCccCChHHHHHHHHHccCCcccCcCHHHHHHhhC
Confidence            11                1111245677888999999999999999999874

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan

>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

Probab=99.79  E-value=3.9e-19  Score=168.35  Aligned_cols=175  Identities=21%  Similarity=0.238  Sum_probs=126.5

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEc
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLD  264 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~  264 (392)
                      |++.++.......+...|+||||+ .+++............+..+..++.|+++||.|||++   +++|+||||+||+++
T Consensus        61 h~~i~~~~~~~~~~~~~~lv~e~~-~~~L~~~i~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~dl~p~nill~  136 (298)
T cd07841          61 HPNIIGLLDVFGHKSNINLVFEFM-ETDLEKVIKDKSIVLTPADIKSYMLMTLRGLEYLHSN---WILHRDLKPNNLLIA  136 (298)
T ss_pred             CCCChhhhheeecCCEEEEEEccc-CCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecCCChhhEEEc
Confidence            556666555555556789999999 7887765544432344555788999999999999998   899999999999999


Q ss_pred             CCCCCeEeeeeceEEeCCCCcceeceeeecccccCchhHH-------HHHHHhcCCCcc-eeecccccCCCCCCHH----
Q 045577          265 AEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELL-------QAWKLWSEGDPM-EIIDEQTKMKGPFSAD----  332 (392)
Q Consensus       265 ~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~-------~~~diws~G~v~-~~ld~~~~~~~~~~~~----  332 (392)
                      .++.+||+|||+++....... ......++..|+| ||..       ...|+|+.|+++ +++.+.+.+....+.+    
T Consensus       137 ~~~~~~l~dfg~~~~~~~~~~-~~~~~~~~~~y~a-PE~~~~~~~~~~~~Dv~slG~il~e~~~g~~~~~~~~~~~~~~~  214 (298)
T cd07841         137 SDGVLKLADFGLARSFGSPNR-KMTHQVVTRWYRA-PELLFGARHYGVGVDMWSVGCIFAELLLRVPFLPGDSDIDQLGK  214 (298)
T ss_pred             CCCCEEEccceeeeeccCCCc-cccccccceeeeC-HHHHhCCCCCCcHHHHHHHHHHHHHHHcCCccccCCccHHHHHH
Confidence            999999999999987653221 1122345777888 6654       368999999876 4554433222211111    


Q ss_pred             ---------------------------------------HHHHHHHHHHhhcccCcCCCCCHHHHHHH--HccC
Q 045577          333 ---------------------------------------ELVKCIEVGLLCVQQRIEDWPTMSSVLTM--LSNE  365 (392)
Q Consensus       333 ---------------------------------------~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~--L~~~  365 (392)
                                                             ....+.+++..|++.+|++||++.+|++.  +++.
T Consensus       215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~e~l~~~~~~~~  288 (298)
T cd07841         215 IFEALGTPTEENWPGVTSLPDYVEFKPFPPTPLKQIFPAASDDALDLLQRLLTLNPNKRITARQALEHPYFSND  288 (298)
T ss_pred             HHHHcCCCchhhhhhcccccccccccccCCcchhhhcccccHHHHHHHHHHhcCCcccCcCHHHHhhCccccCC
Confidence                                                   12345678889999999999999999986  5543

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is

>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase

Probab=99.79  E-value=2.7e-19  Score=168.76  Aligned_cols=176  Identities=20%  Similarity=0.225  Sum_probs=123.8

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhc---------------------cccchhhhhHHHHHHHhhhhc
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFEC---------------------SKYSSYVTNILYGIARVILYL  243 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~---------------------~~~~~~~~~i~~~ia~gL~yL  243 (392)
                      |++-++.....+.+...+++|||++++++.........                     ......++.++.|++.||.||
T Consensus        67 h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~l  146 (288)
T cd05050          67 HPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYL  146 (288)
T ss_pred             CCchheEEEEEcCCCccEEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHH
Confidence            44445544444445678999999999998776543221                     113334688999999999999


Q ss_pred             CcCCCCceeecccccceeEEcCCCCCeEeeeeceEEeCCCCc-ceeceeeecccccCchhHH------HHHHHhcCCCcc
Q 045577          244 PEDSRLEIIHRDHKTSNVLLDAEINPNISDFGPARIFGDQTE-EVTGRVIGTQTLKTVPELL------QAWKLWSEGDPM  316 (392)
Q Consensus       244 H~~~~~~iiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~~-~~~~~~~gt~~y~a~~~~~------~~~diws~G~v~  316 (392)
                      |+.   +++||||||+||+++.++.+||+|||++........ ........+..|+| ||..      .+.|+|++|+++
T Consensus       147 H~~---~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~a-PE~~~~~~~~~~~Dv~slG~il  222 (288)
T cd05050         147 SER---KFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYKASENDAIPIRWMP-PESIFYNRYTTESDVWAYGVVL  222 (288)
T ss_pred             HhC---CeecccccHhheEecCCCceEECccccceecccCccccccCCCccChhhcC-HHHHhcCCCCchhHHHHHHHHH
Confidence            998   899999999999999999999999999876542211 11112234567888 6654      368999999876


Q ss_pred             -eeec-ccccCCCCC----------------CHHHHHHHHHHHHhhcccCcCCCCCHHHHHHHHcc
Q 045577          317 -EIID-EQTKMKGPF----------------SADELVKCIEVGLLCVQQRIEDWPTMSSVLTMLSN  364 (392)
Q Consensus       317 -~~ld-~~~~~~~~~----------------~~~~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~L~~  364 (392)
                       +++. +...+.+..                +......+.+++.+|++.+|++||++.|+++.|+.
T Consensus       223 ~el~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~el~~~l~~  288 (288)
T cd05050         223 WEIFSYGMQPYYGMAHEEVIYYVRDGNVLSCPDNCPLELYNLMRLCWSKLPSDRPSFASINRILQR  288 (288)
T ss_pred             HHHHhCCCCCCCCCCHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHhhC
Confidence             4432 211221111                11123467788899999999999999999999974

Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M

>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4

Probab=99.79  E-value=2e-19  Score=172.12  Aligned_cols=177  Identities=21%  Similarity=0.202  Sum_probs=122.9

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhc---------------cccchhhhhHHHHHHHhhhhcCcCCCC
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFEC---------------SKYSSYVTNILYGIARVILYLPEDSRL  249 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~---------------~~~~~~~~~i~~~ia~gL~yLH~~~~~  249 (392)
                      |++.++.......++..|++|||+.++++.........               ......+.+++.|++.||.|||+.   
T Consensus        77 h~~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~---  153 (314)
T cd05099          77 HKNIINLLGVCTQEGPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLESR---  153 (314)
T ss_pred             CCCeeeEEEEEccCCceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHHC---
Confidence            44444444433345678999999999998775543210               113334678899999999999998   


Q ss_pred             ceeecccccceeEEcCCCCCeEeeeeceEEeCCCCc-ceeceeeecccccCchhHH------HHHHHhcCCCcc-eeec-
Q 045577          250 EIIHRDHKTSNVLLDAEINPNISDFGPARIFGDQTE-EVTGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIID-  320 (392)
Q Consensus       250 ~iiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~~-~~~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld-  320 (392)
                      +++||||||+||+++.++.+||+|||+++....... .......++..|++ ||..      .+.|+|+.|+++ +++. 
T Consensus       154 gi~H~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~a-PE~~~~~~~~~~~DiwslG~~l~el~~~  232 (314)
T cd05099         154 RCIHRDLAARNVLVTEDNVMKIADFGLARGVHDIDYYKKTSNGRLPVKWMA-PEALFDRVYTHQSDVWSFGILMWEIFTL  232 (314)
T ss_pred             CeeeccccceeEEEcCCCcEEEccccccccccccccccccccCCCCccccC-HHHHccCCcCccchhhHHHHHHHHHHhC
Confidence            899999999999999999999999999986542111 11111234457998 7654      367999999876 3443 


Q ss_pred             ccccCCCC----------------CCHHHHHHHHHHHHhhcccCcCCCCCHHHHHHHHccC
Q 045577          321 EQTKMKGP----------------FSADELVKCIEVGLLCVQQRIEDWPTMSSVLTMLSNE  365 (392)
Q Consensus       321 ~~~~~~~~----------------~~~~~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~L~~~  365 (392)
                      +...+...                .+......+.+++.+|++.+|++||++.++++.|+..
T Consensus       233 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~l~~~  293 (314)
T cd05099         233 GGSPYPGIPVEELFKLLREGHRMDKPSNCTHELYMLMRECWHAVPTQRPTFKQLVEALDKV  293 (314)
T ss_pred             CCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHH
Confidence            22222111                1111223566788899999999999999999999875

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase

Probab=99.79  E-value=3.4e-19  Score=165.00  Aligned_cols=158  Identities=16%  Similarity=0.211  Sum_probs=117.7

Q ss_pred             CCCeeEEecCccCCCcChhhhhhhc-cccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEcCCCCCeEeeeec
Q 045577          198 DGEVFLMFEGIKLPDKSEFTCEFEC-SKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEINPNISDFGP  276 (392)
Q Consensus       198 ~~~~~lv~e~~~~~~l~~~~~~~~~-~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~~~~~~kl~DFGl  276 (392)
                      ++..|++|||++++++.....+... ...+..+..++.|++.||.|||+.   +++||||||+||+++.++.+|++|||+
T Consensus        72 ~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~nil~~~~~~~kl~dfg~  148 (256)
T cd05082          72 KGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEAN---NFVHRDLAARNVLVSEDNVAKVSDFGL  148 (256)
T ss_pred             CCceEEEEECCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CEeccccchheEEEcCCCcEEecCCcc
Confidence            3568999999999988775544322 234455788999999999999998   899999999999999999999999999


Q ss_pred             eEEeCCCCcceeceeeecccccCchhHH------HHHHHhcCCCcc-eeec-ccccCCCCCCHH----------------
Q 045577          277 ARIFGDQTEEVTGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIID-EQTKMKGPFSAD----------------  332 (392)
Q Consensus       277 a~~~~~~~~~~~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld-~~~~~~~~~~~~----------------  332 (392)
                      ++......    ....++..|++ ||..      .+.|+|+.|+++ +++. +..++... ..+                
T Consensus       149 ~~~~~~~~----~~~~~~~~y~a-PE~~~~~~~~~~~Dv~slG~i~~~l~~~g~~p~~~~-~~~~~~~~~~~~~~~~~~~  222 (256)
T cd05082         149 TKEASSTQ----DTGKLPVKWTA-PEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRI-PLKDVVPRVEKGYKMDAPD  222 (256)
T ss_pred             ceeccccC----CCCccceeecC-HHHHccCCCCchhhhHHHHHHHHHHHhCCCCCCCCC-CHHHHHHHHhcCCCCCCCC
Confidence            87643211    12234567888 6654      368999999876 4443 43222211 111                


Q ss_pred             -HHHHHHHHHHhhcccCcCCCCCHHHHHHHHcc
Q 045577          333 -ELVKCIEVGLLCVQQRIEDWPTMSSVLTMLSN  364 (392)
Q Consensus       333 -~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~L~~  364 (392)
                       ....+.+++.+|++.+|++||++.++++.|+.
T Consensus       223 ~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~  255 (256)
T cd05082         223 GCPPVVYDVMKQCWHLDAATRPSFLQLREQLEH  255 (256)
T ss_pred             CCCHHHHHHHHHHhcCChhhCcCHHHHHHHHhc
Confidence             12356778889999999999999999999975

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re

>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C

Probab=99.79  E-value=1.1e-19  Score=174.79  Aligned_cols=152  Identities=20%  Similarity=0.192  Sum_probs=113.3

Q ss_pred             CCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEcCCCCCeEeeeece
Q 045577          198 DGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEINPNISDFGPA  277 (392)
Q Consensus       198 ~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~~~~~~kl~DFGla  277 (392)
                      .+..|++|||++++++......... ..+..+..++.|++.||.|||+.   +|+||||||+||+++.++.+||+|||++
T Consensus        73 ~~~~~lv~E~~~~g~L~~~~~~~~~-~~~~~~~~~~~qi~~al~~lH~~---~ivH~dlkp~Nill~~~~~~kL~Dfg~~  148 (324)
T cd05587          73 MDRLYFVMEYVNGGDLMYHIQQVGK-FKEPHAVFYAAEIAIGLFFLHSK---GIIYRDLKLDNVMLDAEGHIKIADFGMC  148 (324)
T ss_pred             CCEEEEEEcCCCCCcHHHHHHHcCC-CCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHeEEcCCCCEEEeecCcc
Confidence            4568999999999998765543332 23445788999999999999998   8999999999999999999999999998


Q ss_pred             EEeCCCCcceeceeeecccccCchhHH------HHHHHhcCCCcc-eeecccccCCCCCCHH---------------HHH
Q 045577          278 RIFGDQTEEVTGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIIDEQTKMKGPFSAD---------------ELV  335 (392)
Q Consensus       278 ~~~~~~~~~~~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld~~~~~~~~~~~~---------------~~~  335 (392)
                      +..... ........||+.|+| ||+.      ...|+|+.|+++ +++.++.++.+....+               ...
T Consensus       149 ~~~~~~-~~~~~~~~gt~~y~a-PE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~~~~~~i~~~~~~~~~~~~~  226 (324)
T cd05587         149 KENIFG-GKTTRTFCGTPDYIA-PEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQSIMEHNVSYPKSLSK  226 (324)
T ss_pred             eecCCC-CCceeeecCCccccC-hhhhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCCCCCH
Confidence            753211 112234578999999 7754      367999999876 5666544443322111               122


Q ss_pred             HHHHHHHhhcccCcCCCCCH
Q 045577          336 KCIEVGLLCVQQRIEDWPTM  355 (392)
Q Consensus       336 ~~~~i~~~Cl~~dp~~RPsm  355 (392)
                      .+.+++..|++.+|.+|++.
T Consensus       227 ~~~~li~~~l~~~P~~R~~~  246 (324)
T cd05587         227 EAVSICKGLLTKHPAKRLGC  246 (324)
T ss_pred             HHHHHHHHHhhcCHHHcCCC
Confidence            45567889999999999976

Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory

>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7

Probab=99.79  E-value=1.6e-19  Score=167.99  Aligned_cols=176  Identities=18%  Similarity=0.240  Sum_probs=127.9

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhh---hhccccchhhhhHHHHHHHhhhhcCcCCCCceeeccccccee
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCE---FECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNV  261 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~---~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NI  261 (392)
                      |++.++.....+.++..+++|||++++++......   ......+..+..++.|++.||.|||+.   +++|+||||+||
T Consensus        61 h~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~p~ni  137 (267)
T cd08229          61 HPNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHSR---RVMHRDIKPANV  137 (267)
T ss_pred             CCchhhhhheeEeCCeEEEEEEecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHE
Confidence            55666655555556789999999999888764322   112235555788999999999999998   899999999999


Q ss_pred             EEcCCCCCeEeeeeceEEeCCCCcceeceeeecccccCchhHH------HHHHHhcCCCcc-eeecccccCCCCC-----
Q 045577          262 LLDAEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIIDEQTKMKGPF-----  329 (392)
Q Consensus       262 ll~~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld~~~~~~~~~-----  329 (392)
                      +++.++.++|+|||++........ ......++..|++ ||..      ...|+|+.|+++ +++.+..++.+..     
T Consensus       138 li~~~~~~~l~dfg~~~~~~~~~~-~~~~~~~~~~~~a-pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~  215 (267)
T cd08229         138 FITATGVVKLGDLGLGRFFSSKTT-AAHSLVGTPYYMS-PERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYS  215 (267)
T ss_pred             EEcCCCCEEECcchhhhccccCCc-ccccccCCcCccC-HHHhcCCCccchhhHHHHHHHHHHHHhCCCCcccccchHHH
Confidence            999999999999999876542221 1223467888999 6654      357999999876 4444432221110     


Q ss_pred             -------------C-HHHHHHHHHHHHhhcccCcCCCCCHHHHHHHHccC
Q 045577          330 -------------S-ADELVKCIEVGLLCVQQRIEDWPTMSSVLTMLSNE  365 (392)
Q Consensus       330 -------------~-~~~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~L~~~  365 (392)
                                   . ......+.+++.+|++.+|++||+|.+|+++++..
T Consensus       216 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~i~~~~~~~  265 (267)
T cd08229         216 LCKKIEQCDYPPLPSDHYSEELRQLVNMCINPDPEKRPDITYVYDVAKRM  265 (267)
T ss_pred             HhhhhhcCCCCCCCcccccHHHHHHHHHhcCCCcccCCCHHHHHHHHhhh
Confidence                         0 11223566788899999999999999999999764

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.

>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C

Probab=99.79  E-value=6.7e-20  Score=176.70  Aligned_cols=170  Identities=19%  Similarity=0.139  Sum_probs=120.8

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEc
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLD  264 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~  264 (392)
                      |++.++........+..|++|||++++++.....+.. ...+..+..++.|++.||.|||+.   +++||||||+||+++
T Consensus        55 hp~Iv~~~~~~~~~~~~~lv~e~~~~g~L~~~~~~~~-~l~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nili~  130 (329)
T cd05588          55 HPFLVGLHSCFQTESRLFFVIEFVSGGDLMFHMQRQR-KLPEEHARFYSAEISLALNFLHER---GIIYRDLKLDNVLLD  130 (329)
T ss_pred             CCCCCceEEEEEcCCEEEEEEeCCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHeEEC
Confidence            4444444443334567899999999999865443332 234555788999999999999998   899999999999999


Q ss_pred             CCCCCeEeeeeceEEeCCCCcceeceeeecccccCchhHH------HHHHHhcCCCcc-eeecccccCCC--------CC
Q 045577          265 AEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIIDEQTKMKG--------PF  329 (392)
Q Consensus       265 ~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld~~~~~~~--------~~  329 (392)
                      .++.+||+|||+++..... ........||+.|+| ||+.      .+.|+|+.|+++ +++.+..++..        ..
T Consensus       131 ~~~~~kL~Dfg~~~~~~~~-~~~~~~~~gt~~y~a-PE~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~~  208 (329)
T cd05588         131 AEGHIKLTDYGMCKEGIRP-GDTTSTFCGTPNYIA-PEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGMSDNPDQN  208 (329)
T ss_pred             CCCCEEECcCccccccccC-CCccccccCCccccC-HHHHcCCCCCCccceechHHHHHHHHHCCCCccccccccccccc
Confidence            9999999999998753211 122234678999999 7765      367999999876 45555433321        00


Q ss_pred             ----------------CHHHHHHHHHHHHhhcccCcCCCCC------HHHHHH
Q 045577          330 ----------------SADELVKCIEVGLLCVQQRIEDWPT------MSSVLT  360 (392)
Q Consensus       330 ----------------~~~~~~~~~~i~~~Cl~~dp~~RPs------m~eVv~  360 (392)
                                      +......+.+++..|++.||.+||+      +.++++
T Consensus       209 ~~~~~~~~~~~~~~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~  261 (329)
T cd05588         209 TEDYLFQVILEKQIRIPRSLSVKASSVLKGFLNKDPKERLGCHPQTGFRDIKS  261 (329)
T ss_pred             chHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHhc
Confidence                            0011124567888999999999997      567654

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl

>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

Probab=99.79  E-value=3.3e-19  Score=164.83  Aligned_cols=162  Identities=22%  Similarity=0.284  Sum_probs=117.7

Q ss_pred             CCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEcCCCCCeEeeeece
Q 045577          198 DGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEINPNISDFGPA  277 (392)
Q Consensus       198 ~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~~~~~~kl~DFGla  277 (392)
                      .+..+++|||+.++.+...............+..++.|++.||.|||+.   +++|+||||+||+++.++.+||+|||++
T Consensus        71 ~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~h~dl~p~ni~i~~~~~~~l~d~g~~  147 (256)
T cd05112          71 RSPICLVFEFMEHGCLSDYLRAQRGKFSQETLLGMCLDVCEGMAYLESS---NVIHRDLAARNCLVGENQVVKVSDFGMT  147 (256)
T ss_pred             CCceEEEEEcCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHC---CccccccccceEEEcCCCeEEECCCcce
Confidence            4578999999999988765544333234555788999999999999998   8999999999999999999999999998


Q ss_pred             EEeCCCCcceeceeeecccccCchhHH------HHHHHhcCCCcc-eeec-ccccCCCCCCH----------------HH
Q 045577          278 RIFGDQTEEVTGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIID-EQTKMKGPFSA----------------DE  333 (392)
Q Consensus       278 ~~~~~~~~~~~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld-~~~~~~~~~~~----------------~~  333 (392)
                      +..............++.+|++ ||..      .+.|+|+.|+++ +++. +...+......                ..
T Consensus       148 ~~~~~~~~~~~~~~~~~~~~~a-Pe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~  226 (256)
T cd05112         148 RFVLDDQYTSSTGTKFPVKWSS-PEVFSFSKYSSKSDVWSFGVLMWEVFSEGKTPYENRSNSEVVETINAGFRLYKPRLA  226 (256)
T ss_pred             eecccCcccccCCCccchhhcC-HhHhccCCcChHHHHHHHHHHHHHHHcCCCCCCCcCCHHHHHHHHhCCCCCCCCCCC
Confidence            8654221111112234567888 6654      368999999876 4443 32222211111                12


Q ss_pred             HHHHHHHHHhhcccCcCCCCCHHHHHHHHc
Q 045577          334 LVKCIEVGLLCVQQRIEDWPTMSSVLTMLS  363 (392)
Q Consensus       334 ~~~~~~i~~~Cl~~dp~~RPsm~eVv~~L~  363 (392)
                      ...+.+++.+|++.+|++||++.+|++.|.
T Consensus       227 ~~~~~~l~~~~l~~~p~~Rp~~~~~l~~l~  256 (256)
T cd05112         227 SQSVYELMQHCWKERPEDRPSFSLLLHQLA  256 (256)
T ss_pred             CHHHHHHHHHHcccChhhCCCHHHHHHhhC
Confidence            235677899999999999999999999873

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ

>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=99.79  E-value=2.3e-19  Score=168.74  Aligned_cols=163  Identities=18%  Similarity=0.213  Sum_probs=116.8

Q ss_pred             CCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEcCCCCCeEeeeeceE
Q 045577          199 GEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEINPNISDFGPAR  278 (392)
Q Consensus       199 ~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~~~~~~kl~DFGla~  278 (392)
                      ...+++|||++++++.....+.........+..++.|++.||.|||+.   +++||||||+||+++.++.+||+|||+++
T Consensus        80 ~~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~aL~~LH~~---~i~H~dlkp~nili~~~~~~~l~dfg~~~  156 (284)
T cd05081          80 RNLRLVMEYLPYGSLRDYLQKHRERLDHRKLLLYASQICKGMEYLGSK---RYVHRDLATRNILVESENRVKIGDFGLTK  156 (284)
T ss_pred             CceEEEEEecCCCCHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCCHhhEEECCCCeEEECCCcccc
Confidence            457999999999999876544332334555788999999999999998   89999999999999999999999999998


Q ss_pred             EeCCCCcce--eceeeecccccCchhHH------HHHHHhcCCCcc-eeecccccCC-----------C-----------
Q 045577          279 IFGDQTEEV--TGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIIDEQTKMK-----------G-----------  327 (392)
Q Consensus       279 ~~~~~~~~~--~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld~~~~~~-----------~-----------  327 (392)
                      .........  .....++..|++ ||..      ...|+|+.|+++ +++.......           .           
T Consensus       157 ~~~~~~~~~~~~~~~~~~~~y~a-PE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (284)
T cd05081         157 VLPQDKEYYKVREPGESPIFWYA-PESLTESKFSVASDVWSFGVVLYELFTYSDKSCSPPAEFMRMMGNDKQGQMIVYHL  235 (284)
T ss_pred             cccCCCcceeecCCCCCceEeeC-HHHhccCCcChHHHHHHHHHHHHHHhhcCCcCCCcchhhhhhcccccccccchHHH
Confidence            764322111  111123345777 6654      367999999876 3332110000           0           


Q ss_pred             ----------CCCHHHHHHHHHHHHhhcccCcCCCCCHHHHHHHHccC
Q 045577          328 ----------PFSADELVKCIEVGLLCVQQRIEDWPTMSSVLTMLSNE  365 (392)
Q Consensus       328 ----------~~~~~~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~L~~~  365 (392)
                                +........+.+++.+|++.+|++|||+.+|++.|+..
T Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~~  283 (284)
T cd05081         236 IELLKNNGRLPAPPGCPAEIYAIMKECWNNDPSQRPSFSELALQVEAI  283 (284)
T ss_pred             HHHHhcCCcCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHhc
Confidence                      00011123577888899999999999999999999864

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th

>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

Probab=99.78  E-value=2.6e-19  Score=165.33  Aligned_cols=172  Identities=22%  Similarity=0.244  Sum_probs=125.4

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhh-hccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEE
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEF-ECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLL  263 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~-~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll  263 (392)
                      |++.++.......++..|++|||++++++....... ........+..++.|++.||.|||+.   +++|+||||+||++
T Consensus        58 h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~~l~~al~~lH~~---~i~h~dl~~~nili  134 (256)
T cd08529          58 SSYIIRYYESFLDKGKLNIVMEYAENGDLHKLLKMQRGRPLPEDQVWRFFIQILLGLAHLHSK---KILHRDIKSLNLFL  134 (256)
T ss_pred             CCCeehheeeeccCCEEEEEEEeCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcceEEE
Confidence            444444444444456789999999999987755443 22334555788999999999999998   89999999999999


Q ss_pred             cCCCCCeEeeeeceEEeCCCCcceeceeeecccccCchhHH------HHHHHhcCCCcc-eeecccccCCCCC-------
Q 045577          264 DAEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIIDEQTKMKGPF-------  329 (392)
Q Consensus       264 ~~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld~~~~~~~~~-------  329 (392)
                      +.++.+||+|||+++....... ......|++.|++ ||+.      ...|+|+.|+++ +++.+..++....       
T Consensus       135 ~~~~~~~l~df~~~~~~~~~~~-~~~~~~~~~~y~a-PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~  212 (256)
T cd08529         135 DAYDNVKIGDLGVAKLLSDNTN-FANTIVGTPYYLS-PELCEDKPYNEKSDVWALGVVLYECCTGKHPFDANNQGALILK  212 (256)
T ss_pred             eCCCCEEEcccccceeccCccc-hhhccccCccccC-HHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHHH
Confidence            9999999999999987653221 1223467888999 7764      368999999876 4554433332211       


Q ss_pred             ---------CHHHHHHHHHHHHhhcccCcCCCCCHHHHHHH
Q 045577          330 ---------SADELVKCIEVGLLCVQQRIEDWPTMSSVLTM  361 (392)
Q Consensus       330 ---------~~~~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~  361 (392)
                               .......+.+++.+|++.+|++||++.++++.
T Consensus       213 ~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~  253 (256)
T cd08529         213 IIRGVFPPVSQMYSQQLAQLIDQCLTKDYRQRPDTFQLLRN  253 (256)
T ss_pred             HHcCCCCCCccccCHHHHHHHHHHccCCcccCcCHHHHhhC
Confidence                     11122356778889999999999999998864

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc

>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases

Probab=99.78  E-value=2.9e-19  Score=172.43  Aligned_cols=173  Identities=18%  Similarity=0.148  Sum_probs=118.0

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEc
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLD  264 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~  264 (392)
                      |+++++.......++..|++|||+.++++.....+..-...+..+..++.||+.||.|||+.   +|+||||||+||+++
T Consensus        60 ~~~i~~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nill~  136 (331)
T cd05597          60 RRWITNLHYAFQDENNLYLVMDYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVLAIDSVHQL---GYVHRDIKPDNVLLD  136 (331)
T ss_pred             CCCCCceEEEEecCCeEEEEEecCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CeEECCCCHHHEEEC
Confidence            33444433333345679999999999999776544222334555788999999999999998   899999999999999


Q ss_pred             CCCCCeEeeeeceEEeCCCCcceeceeeecccccCchhHHH-----------HHHHhcCCCcc-eeecccccCCCCCCHH
Q 045577          265 AEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELLQ-----------AWKLWSEGDPM-EIIDEQTKMKGPFSAD  332 (392)
Q Consensus       265 ~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~~-----------~~diws~G~v~-~~ld~~~~~~~~~~~~  332 (392)
                      .++.+||+|||++..+............||+.|+| ||+..           ..|+|+.|+++ +++.++.++......+
T Consensus       137 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~a-PE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~  215 (331)
T cd05597         137 KNGHIRLADFGSCLRLLADGTVQSNVAVGTPDYIS-PEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVE  215 (331)
T ss_pred             CCCCEEEEECCceeecCCCCCccccceeccccccC-HHHHhhccccccCCCCcceeehhhhHHHHHhhCCCCCCCCCHHH
Confidence            99999999999997765332222233569999999 77653           46999999876 5555543332211111


Q ss_pred             --------------------HHHHHHHHHHhhc--ccCcCCCCCHHHHHHH
Q 045577          333 --------------------ELVKCIEVGLLCV--QQRIEDWPTMSSVLTM  361 (392)
Q Consensus       333 --------------------~~~~~~~i~~~Cl--~~dp~~RPsm~eVv~~  361 (392)
                                          ....+.+++..|+  ..++..||++.++++.
T Consensus       216 ~~~~i~~~~~~~~~~~~~~~~~~~~~~li~~ll~~~~~r~~r~~~~~~l~h  266 (331)
T cd05597         216 TYGKIMNHKEHFQFPPDVTDVSEEAKDLIRRLICSPETRLGRNGLQDFKDH  266 (331)
T ss_pred             HHHHHHcCCCcccCCCccCCCCHHHHHHHHHHccCcccccCCCCHHHHhcC
Confidence                                1122333444444  4455558888888766

Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,

>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros

Probab=99.78  E-value=3.1e-19  Score=166.25  Aligned_cols=176  Identities=20%  Similarity=0.204  Sum_probs=122.9

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhc------cccchhhhhHHHHHHHhhhhcCcCCCCceeeccccc
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFEC------SKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKT  258 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~------~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp  258 (392)
                      |++.++.......++..+++|||++++++.........      ......+..++.|++.||.|||+.   +++|+||||
T Consensus        58 h~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dl~p  134 (269)
T cd05044          58 HPNIVKLLGVCLLNEPQYIIMELMEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQM---HFIHRDLAA  134 (269)
T ss_pred             CCCeeeEeeeecCCCCeEEEEeccCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHhC---CcccCCCCh
Confidence            44444444433335678999999999998775433211      123455788999999999999998   899999999


Q ss_pred             ceeEEcCCC-----CCeEeeeeceEEeCCCCc-ceeceeeecccccCchhHH------HHHHHhcCCCcc-eeec-cccc
Q 045577          259 SNVLLDAEI-----NPNISDFGPARIFGDQTE-EVTGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIID-EQTK  324 (392)
Q Consensus       259 ~NIll~~~~-----~~kl~DFGla~~~~~~~~-~~~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld-~~~~  324 (392)
                      +||+++.+.     .+|++|||+++....... .......++..|++ ||..      ...|+|++|+++ +++. +...
T Consensus       135 ~nil~~~~~~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~a-PE~~~~~~~~~~~Dv~slG~il~ellt~g~~p  213 (269)
T cd05044         135 RNCLVSEKGYDADRVVKIGDFGLARDIYKSDYYRKEGEGLLPVRWMA-PESLLDGKFTTQSDVWSFGVLMWEILTLGQQP  213 (269)
T ss_pred             heEEEecCCCCCCcceEECCcccccccccccccccCcccCCCccccC-HHHHccCCcccchhHHHHHHHHHHHHHcCCCC
Confidence            999999877     899999999876542111 11122345677888 6654      357999999876 4443 3222


Q ss_pred             CCCCC----------------CHHHHHHHHHHHHhhcccCcCCCCCHHHHHHHHcc
Q 045577          325 MKGPF----------------SADELVKCIEVGLLCVQQRIEDWPTMSSVLTMLSN  364 (392)
Q Consensus       325 ~~~~~----------------~~~~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~L~~  364 (392)
                      +....                .......+.+++.+|++.+|++||++.+|.+.|+.
T Consensus       214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~  269 (269)
T cd05044         214 YPALNNQEVLQHVTAGGRLQKPENCPDKIYQLMTNCWAQDPSERPTFDRIQEILQN  269 (269)
T ss_pred             CcccCHHHHHHHHhcCCccCCcccchHHHHHHHHHHcCCCcccCCCHHHHHHHHhC
Confidence            21111                11223456778889999999999999999999863

Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male

>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase

Probab=99.78  E-value=2.5e-19  Score=170.95  Aligned_cols=171  Identities=20%  Similarity=0.256  Sum_probs=119.5

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEc
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLD  264 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~  264 (392)
                      |++.++.......++..+++|||++. ++........-......+..++.|++.||.|||+.   +|+||||||+||+++
T Consensus        63 h~~iv~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~---~ivH~dlkp~Nill~  138 (309)
T cd07872          63 HANIVTLHDIVHTDKSLTLVFEYLDK-DLKQYMDDCGNIMSMHNVKIFLYQILRGLAYCHRR---KVLHRDLKPQNLLIN  138 (309)
T ss_pred             CCCcceEEEEEeeCCeEEEEEeCCCC-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEC
Confidence            45555554444445678999999985 44333222211223444677899999999999998   899999999999999


Q ss_pred             CCCCCeEeeeeceEEeCCCCcceeceeeecccccCchhHH-------HHHHHhcCCCcc-eeecccccCCCCCCHHH---
Q 045577          265 AEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELL-------QAWKLWSEGDPM-EIIDEQTKMKGPFSADE---  333 (392)
Q Consensus       265 ~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~-------~~~diws~G~v~-~~ld~~~~~~~~~~~~~---  333 (392)
                      .++.+||+|||+++....... ......++..|+| ||..       ...|+|+.|+++ +++.+++.+.+....+.   
T Consensus       139 ~~~~~kl~Dfg~~~~~~~~~~-~~~~~~~~~~y~a-PE~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~  216 (309)
T cd07872         139 ERGELKLADFGLARAKSVPTK-TYSNEVVTLWYRP-PDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVEDELHL  216 (309)
T ss_pred             CCCCEEECccccceecCCCcc-ccccccccccccC-CHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHH
Confidence            999999999999976542221 1122467889999 6644       368999999876 55555444332211110   


Q ss_pred             ------------------------------------------HHHHHHHHHhhcccCcCCCCCHHHHHHH
Q 045577          334 ------------------------------------------LVKCIEVGLLCVQQRIEDWPTMSSVLTM  361 (392)
Q Consensus       334 ------------------------------------------~~~~~~i~~~Cl~~dp~~RPsm~eVv~~  361 (392)
                                                                ...+.+++.+|++.||.+|||+.|+++.
T Consensus       217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h  286 (309)
T cd07872         217 IFRLLGTPTEETWPGISSNDEFKNYNFPKYKPQPLINHAPRLDTEGIELLTKFLQYESKKRISAEEAMKH  286 (309)
T ss_pred             HHHHhCCCCHHHHhhhcchhhhhhhhcCccCCCchhhhccCCCHHHHHHHHHhccCChhhCCCHHHHhcC
Confidence                                                      1234568889999999999999998873

Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play

>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

Probab=99.78  E-value=2.4e-19  Score=165.90  Aligned_cols=174  Identities=20%  Similarity=0.223  Sum_probs=124.6

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhh-ccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEE
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFE-CSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLL  263 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~-~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll  263 (392)
                      |++.++....... ...+++|||++++++.....+.. -...+..+..++.|++.||.|||+.   +++|+||||+||++
T Consensus        55 h~~iv~~~~~~~~-~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~di~p~nil~  130 (257)
T cd05040          55 HENLIRLYGVVLT-HPLMMVTELAPLGSLLDRLRKDALGHFLISTLCDYAVQIANGMRYLESK---RFIHRDLAARNILL  130 (257)
T ss_pred             CCCccceeEEEcC-CeEEEEEEecCCCcHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHHhC---CccccccCcccEEE
Confidence            4444444444333 67899999999998877554432 1234455788999999999999998   89999999999999


Q ss_pred             cCCCCCeEeeeeceEEeCCCCcc--eeceeeecccccCchhHHH------HHHHhcCCCcc-eeec-ccccCCCCC----
Q 045577          264 DAEINPNISDFGPARIFGDQTEE--VTGRVIGTQTLKTVPELLQ------AWKLWSEGDPM-EIID-EQTKMKGPF----  329 (392)
Q Consensus       264 ~~~~~~kl~DFGla~~~~~~~~~--~~~~~~gt~~y~a~~~~~~------~~diws~G~v~-~~ld-~~~~~~~~~----  329 (392)
                      +.++.+||+|||+++.+......  ......++..|++ ||...      ..|+|+.|+++ +++. +...+....    
T Consensus       131 ~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~~-pE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~  209 (257)
T cd05040         131 ASDDKVKIGDFGLMRALPQNEDHYVMEEHLKVPFAWCA-PESLRTRTFSHASDVWMFGVTLWEMFTYGEEPWAGLSGSQI  209 (257)
T ss_pred             ecCCEEEeccccccccccccccceecccCCCCCceecC-HHHhcccCcCchhhhHHHHHHHHHHHhCCCCCCCCCCHHHH
Confidence            99999999999999876522111  1112456778998 77553      57999999876 4443 432221111    


Q ss_pred             -------------CHHHHHHHHHHHHhhcccCcCCCCCHHHHHHHHc
Q 045577          330 -------------SADELVKCIEVGLLCVQQRIEDWPTMSSVLTMLS  363 (392)
Q Consensus       330 -------------~~~~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~L~  363 (392)
                                   +......+.+++.+|++.+|++||++.+|++.|.
T Consensus       210 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~  256 (257)
T cd05040         210 LKKIDKEGERLERPEACPQDIYNVMLQCWAHNPADRPTFAALREFLP  256 (257)
T ss_pred             HHHHHhcCCcCCCCccCCHHHHHHHHHHCCCCcccCCCHHHHHHHhc
Confidence                         1111245667888999999999999999999885

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and

>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk

Probab=99.78  E-value=3.2e-19  Score=165.58  Aligned_cols=163  Identities=20%  Similarity=0.291  Sum_probs=119.3

Q ss_pred             CCCeeEEecCccCCCcChhhhhhh-ccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEcCCCCCeEeeeec
Q 045577          198 DGEVFLMFEGIKLPDKSEFTCEFE-CSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEINPNISDFGP  276 (392)
Q Consensus       198 ~~~~~lv~e~~~~~~l~~~~~~~~-~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~~~~~~kl~DFGl  276 (392)
                      ....|++|||++++++........ .......+..++.|++.||.|||+.   +++||||||+||+++.++.+||+|||+
T Consensus        72 ~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~---~i~H~di~p~Nili~~~~~~~l~dfg~  148 (260)
T cd05070          72 EEPIYIVTEYMSKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERM---NYIHRDLRSANILVGDGLVCKIADFGL  148 (260)
T ss_pred             CCCcEEEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCccceEEEeCCceEEeCCcee
Confidence            356799999999998877554321 2234455788999999999999998   899999999999999999999999999


Q ss_pred             eEEeCCCCcceeceeeecccccCchhHH------HHHHHhcCCCcc-eeec-ccccCCCCCC----------------HH
Q 045577          277 ARIFGDQTEEVTGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIID-EQTKMKGPFS----------------AD  332 (392)
Q Consensus       277 a~~~~~~~~~~~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld-~~~~~~~~~~----------------~~  332 (392)
                      +..+............++..|+| ||..      ...|+|++|+++ +++. +.+.+.+...                ..
T Consensus       149 ~~~~~~~~~~~~~~~~~~~~y~a-PE~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~  227 (260)
T cd05070         149 ARLIEDNEYTARQGAKFPIKWTA-PEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNREVLEQVERGYRMPCPQD  227 (260)
T ss_pred             eeeccCcccccccCCCCCccccC-hHHHhcCCCcchhhhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCCCCCc
Confidence            98764322111122334567999 6654      368999999876 4444 3322222111                11


Q ss_pred             HHHHHHHHHHhhcccCcCCCCCHHHHHHHHcc
Q 045577          333 ELVKCIEVGLLCVQQRIEDWPTMSSVLTMLSN  364 (392)
Q Consensus       333 ~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~L~~  364 (392)
                      ....+.+++.+|++.+|++|||+.++.+.|+.
T Consensus       228 ~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~  259 (260)
T cd05070         228 CPISLHELMLQCWKKDPEERPTFEYLQSFLED  259 (260)
T ss_pred             CCHHHHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence            22356678889999999999999999999874

Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r

>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta

Probab=99.78  E-value=2.7e-19  Score=176.98  Aligned_cols=133  Identities=22%  Similarity=0.292  Sum_probs=98.5

Q ss_pred             hhhHHHHHHHhhhhcCcCCCCceeecccccceeEEcCCCCCeEeeeeceEEeCCCCc-ceeceeeecccccCchhHH---
Q 045577          229 VTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEINPNISDFGPARIFGDQTE-EVTGRVIGTQTLKTVPELL---  304 (392)
Q Consensus       229 ~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~~-~~~~~~~gt~~y~a~~~~~---  304 (392)
                      +++++.|++.||.|||+.   +++||||||+||+++.++.+||+|||+++....... .......++..|++ ||..   
T Consensus       241 ~~~~~~qi~~aL~~LH~~---~ivHrdlkp~NiLl~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~a-PE~~~~~  316 (401)
T cd05107         241 LVGFSYQVANGMEFLASK---NCVHRDLAARNVLICEGKLVKICDFGLARDIMRDSNYISKGSTFLPLKWMA-PESIFNN  316 (401)
T ss_pred             HHHHHHHHHHHHHHHhcC---CcCcccCCcceEEEeCCCEEEEEecCcceecccccccccCCCcCCCCceeC-hHHhcCC
Confidence            567889999999999998   899999999999999999999999999986532111 11222356788999 6654   


Q ss_pred             ---HHHHHhcCCCcc-eeec-ccccCCCCCCHH-----------------HHHHHHHHHHhhcccCcCCCCCHHHHHHHH
Q 045577          305 ---QAWKLWSEGDPM-EIID-EQTKMKGPFSAD-----------------ELVKCIEVGLLCVQQRIEDWPTMSSVLTML  362 (392)
Q Consensus       305 ---~~~diws~G~v~-~~ld-~~~~~~~~~~~~-----------------~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~L  362 (392)
                         ...|+|+.|+++ +++. ++.++......+                 ....+.+++..|++.+|++||++.+|++.|
T Consensus       317 ~~~~~~DvwslGvil~e~l~~g~~P~~~~~~~~~~~~~~~~~~~~~~p~~~~~~l~~li~~cl~~~P~~RPs~~ell~~L  396 (401)
T cd05107         317 LYTTLSDVWSFGILLWEIFTLGGTPYPELPMNEQFYNAIKRGYRMAKPAHASDEIYEIMQKCWEEKFEIRPDFSQLVHLV  396 (401)
T ss_pred             CCCcHhHHHHHHHHHHHHHHcCCCCCCCCCchHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHH
Confidence               367999999876 4454 322222111111                 123566788899999999999999999999


Q ss_pred             ccC
Q 045577          363 SNE  365 (392)
Q Consensus       363 ~~~  365 (392)
                      +..
T Consensus       397 ~~~  399 (401)
T cd05107         397 GDL  399 (401)
T ss_pred             HHH
Confidence            864

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D

>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=99.78  E-value=9.7e-20  Score=171.30  Aligned_cols=161  Identities=22%  Similarity=0.245  Sum_probs=116.9

Q ss_pred             CCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEcCCCCCeEeeeeceE
Q 045577          199 GEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEINPNISDFGPAR  278 (392)
Q Consensus       199 ~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~~~~~~kl~DFGla~  278 (392)
                      ...+++|||+.++++.......  ......+..++.|++.||.|||+.   +++||||||+||+++.++.+||+|||+++
T Consensus        81 ~~~~lv~e~~~~~~l~~~~~~~--~l~~~~~~~i~~~l~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~~l~dfg~~~  155 (283)
T cd05080          81 KGLQLIMEYVPLGSLRDYLPKH--KLNLAQLLLFAQQICEGMAYLHSQ---HYIHRDLAARNVLLDNDRLVKIGDFGLAK  155 (283)
T ss_pred             ceEEEEecCCCCCCHHHHHHHc--CCCHHHHHHHHHHHHHHHHHHHHC---CeeccccChheEEEcCCCcEEEeeccccc
Confidence            3478999999999987655432  245556889999999999999998   89999999999999999999999999998


Q ss_pred             EeCCCCcc--eeceeeecccccCchhHH------HHHHHhcCCCcc-eeecccccCCC----------------------
Q 045577          279 IFGDQTEE--VTGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIIDEQTKMKG----------------------  327 (392)
Q Consensus       279 ~~~~~~~~--~~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld~~~~~~~----------------------  327 (392)
                      ........  ......++..|++ ||..      .+.|+|+.|+++ +++.+..+...                      
T Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~-PE~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~  234 (283)
T cd05080         156 AVPEGHEYYRVREDGDSPVFWYA-VECLKENKFSYASDVWSFGVTLYELLTHCDSKQSPPKKFEEMIGPKQGQMTVVRLI  234 (283)
T ss_pred             ccCCcchhhccCCCCCCCceeeC-HhHhcccCCCcccccHHHHHHHHHHHhCCCCCCCCcchhhhhhcccccccchhhhh
Confidence            66422111  1111234556777 6654      367999999876 44433111100                      


Q ss_pred             ---------CCCHHHHHHHHHHHHhhcccCcCCCCCHHHHHHHHccC
Q 045577          328 ---------PFSADELVKCIEVGLLCVQQRIEDWPTMSSVLTMLSNE  365 (392)
Q Consensus       328 ---------~~~~~~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~L~~~  365 (392)
                               +.+......+.+++..|++.+|++||++.+|+++|+..
T Consensus       235 ~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~i~~~l~~~  281 (283)
T cd05080         235 ELLERGMRLPCPKNCPQEVYILMKNCWETEAKFRPTFRSLIPILKEM  281 (283)
T ss_pred             hhhhcCCCCCCCCCCCHHHHHHHHHHhccChhhCCCHHHHHHHHHHh
Confidence                     00111124677788899999999999999999999865

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign

>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1

Probab=99.78  E-value=1.2e-19  Score=170.63  Aligned_cols=161  Identities=20%  Similarity=0.132  Sum_probs=117.6

Q ss_pred             CCCCCeeEEecCccCCCcChhhhhh---hccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEcCCCCCeEe
Q 045577          196 CGDGEVFLMFEGIKLPDKSEFTCEF---ECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEINPNIS  272 (392)
Q Consensus       196 C~~~~~~lv~e~~~~~~l~~~~~~~---~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~~~~~~kl~  272 (392)
                      ..++..|++|||++++++.......   .....+..+..++.|++.||.|||+.   +|+||||||+||+++.++.+||+
T Consensus        63 ~~~~~~~lv~e~~~~g~L~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~~l~  139 (280)
T cd05608          63 QTKTDLCLVMTIMNGGDLRYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQR---RIIYRDLKPENVLLDNDGNVRIS  139 (280)
T ss_pred             cCCCeEEEEEeCCCCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEe
Confidence            3356789999999999987644321   12234555788999999999999998   89999999999999999999999


Q ss_pred             eeeceEEeCCCCcceeceeeecccccCchhHH------HHHHHhcCCCcc-eeecccccCCCCC----------------
Q 045577          273 DFGPARIFGDQTEEVTGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIIDEQTKMKGPF----------------  329 (392)
Q Consensus       273 DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld~~~~~~~~~----------------  329 (392)
                      |||++..+..... ......|++.|+| ||..      .+.|+|+.|+++ +++.++.++....                
T Consensus       140 dfg~~~~~~~~~~-~~~~~~g~~~y~a-PE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~  217 (280)
T cd05608         140 DLGLAVELKDGQS-KTKGYAGTPGFMA-PELLQGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRILNDS  217 (280)
T ss_pred             eCccceecCCCCc-cccccCCCcCccC-HHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCcchhHHHHHHhhcccC
Confidence            9999987643221 2233578999999 7765      368999999876 5555533332211                


Q ss_pred             ---CHHHHHHHHHHHHhhcccCcCCCC-----CHHHHHHH
Q 045577          330 ---SADELVKCIEVGLLCVQQRIEDWP-----TMSSVLTM  361 (392)
Q Consensus       330 ---~~~~~~~~~~i~~~Cl~~dp~~RP-----sm~eVv~~  361 (392)
                         +......+.+++..|++.+|++||     +++++++.
T Consensus       218 ~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~l~h  257 (280)
T cd05608         218 VTYPDKFSPASKSFCEALLAKDPEKRLGFRDGNCDGLRTH  257 (280)
T ss_pred             CCCcccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHhcC
Confidence               011123566788899999999999     66777653

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g

>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3

Probab=99.78  E-value=6.5e-19  Score=162.92  Aligned_cols=172  Identities=16%  Similarity=0.184  Sum_probs=123.3

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhh-ccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEE
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFE-CSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLL  263 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~-~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll  263 (392)
                      |++.++.......++..|++|||++++++........ .......+..++.|++.||.|||+.   +++|+||||.||++
T Consensus        57 h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~---~i~H~dl~p~nili  133 (255)
T cd08219          57 HPNIVAFKESFEADGHLYIVMEYCDGGDLMQKIKLQRGKLFPEDTILQWFVQMCLGVQHIHEK---RVLHRDIKSKNIFL  133 (255)
T ss_pred             CCCcceEEEEEEECCEEEEEEeeCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHhhC---CcccCCCCcceEEE
Confidence            3343333333334567899999999998876554322 2234555788999999999999998   89999999999999


Q ss_pred             cCCCCCeEeeeeceEEeCCCCcceeceeeecccccCchhHH------HHHHHhcCCCcc-eeecccccCCCCC-------
Q 045577          264 DAEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIIDEQTKMKGPF-------  329 (392)
Q Consensus       264 ~~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld~~~~~~~~~-------  329 (392)
                      +.++.++++|||++........ ......|+..|+| ||..      ...|+|+.|+++ +++.+..++....       
T Consensus       134 ~~~~~~~l~dfg~~~~~~~~~~-~~~~~~~~~~~~a-PE~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~~~~  211 (255)
T cd08219         134 TQNGKVKLGDFGSARLLTSPGA-YACTYVGTPYYVP-PEIWENMPYNNKSDIWSLGCILYELCTLKHPFQANSWKNLILK  211 (255)
T ss_pred             CCCCcEEEcccCcceeeccccc-ccccccCCccccC-HHHHccCCcCchhhhhhhchhheehhhccCCCCCCCHHHHHHH
Confidence            9999999999999987643221 1223568888999 7765      367999999876 4444433332211       


Q ss_pred             ---------CHHHHHHHHHHHHhhcccCcCCCCCHHHHHHH
Q 045577          330 ---------SADELVKCIEVGLLCVQQRIEDWPTMSSVLTM  361 (392)
Q Consensus       330 ---------~~~~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~  361 (392)
                               +......+.+++.+|++.+|++||++.+++..
T Consensus       212 ~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~  252 (255)
T cd08219         212 VCQGSYKPLPSHYSYELRSLIKQMFKRNPRSRPSATTILSR  252 (255)
T ss_pred             HhcCCCCCCCcccCHHHHHHHHHHHhCCcccCCCHHHHhhc
Confidence                     11112345678889999999999999999864

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati

>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta

Probab=99.78  E-value=1e-19  Score=175.33  Aligned_cols=152  Identities=22%  Similarity=0.196  Sum_probs=113.0

Q ss_pred             CCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEcCCCCCeEeeeece
Q 045577          198 DGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEINPNISDFGPA  277 (392)
Q Consensus       198 ~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~~~~~~kl~DFGla  277 (392)
                      .+..|++|||++++++.....+... ..+..+..++.|++.||.|||+.   +|+||||||+||+++.++.+||+|||++
T Consensus        68 ~~~~~lv~e~~~~~~L~~~~~~~~~-l~~~~~~~~~~qi~~al~~lH~~---~ivHrDlkp~Nili~~~~~~kl~Dfg~~  143 (327)
T cd05617          68 TSRLFLVIEYVNGGDLMFHMQRQRK-LPEEHARFYAAEICIALNFLHER---GIIYRDLKLDNVLLDADGHIKLTDYGMC  143 (327)
T ss_pred             CCEEEEEEeCCCCCcHHHHHHHcCC-CCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEEeCCCCEEEeccccc
Confidence            4678999999999998765433322 34455788999999999999998   8999999999999999999999999998


Q ss_pred             EEeCCCCcceeceeeecccccCchhHH------HHHHHhcCCCcc-eeecccccCCCC------CCHH------------
Q 045577          278 RIFGDQTEEVTGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIIDEQTKMKGP------FSAD------------  332 (392)
Q Consensus       278 ~~~~~~~~~~~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld~~~~~~~~------~~~~------------  332 (392)
                      +..... ........||+.|+| ||+.      .+.|+|+.|+++ +++.+..++...      ...+            
T Consensus       144 ~~~~~~-~~~~~~~~gt~~y~a-PE~~~~~~~~~~~DiwslGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~  221 (327)
T cd05617         144 KEGLGP-GDTTSTFCGTPNYIA-PEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIITDNPDMNTEDYLFQVILEKPIR  221 (327)
T ss_pred             eeccCC-CCceecccCCcccCC-HHHHCCCCCCchheeehhHHHHHHHHhCCCCCCccCCCcccccHHHHHHHHHhCCCC
Confidence            753211 112234678999999 7765      378999999876 566554444210      0011            


Q ss_pred             ----HHHHHHHHHHhhcccCcCCCCCH
Q 045577          333 ----ELVKCIEVGLLCVQQRIEDWPTM  355 (392)
Q Consensus       333 ----~~~~~~~i~~~Cl~~dp~~RPsm  355 (392)
                          ....+.+++..|++.||++||++
T Consensus       222 ~p~~~~~~~~~li~~~L~~dP~~R~~~  248 (327)
T cd05617         222 IPRFLSVKASHVLKGFLNKDPKERLGC  248 (327)
T ss_pred             CCCCCCHHHHHHHHHHhccCHHHcCCC
Confidence                11245678889999999999984

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways

>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5

Probab=99.78  E-value=1.3e-19  Score=168.77  Aligned_cols=172  Identities=17%  Similarity=0.184  Sum_probs=121.4

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEc
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLD  264 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~  264 (392)
                      |++.++........+..|++|||++++++.....+.. ......+..++.|++.||.|||+.   +|+|||+||+||+++
T Consensus        65 h~~ii~~~~~~~~~~~~~iv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~nill~  140 (267)
T cd06646          65 HCNIVAYFGSYLSREKLWICMEYCGGGSLQDIYHVTG-PLSELQIAYVCRETLQGLAYLHSK---GKMHRDIKGANILLT  140 (267)
T ss_pred             CCCeeeeeEEEEeCCEEEEEEeCCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEC
Confidence            3444444333334567899999999999876554332 234445788999999999999998   899999999999999


Q ss_pred             CCCCCeEeeeeceEEeCCCCcceeceeeecccccCchhHH---------HHHHHhcCCCcc-eeecccccCCCCC-----
Q 045577          265 AEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELL---------QAWKLWSEGDPM-EIIDEQTKMKGPF-----  329 (392)
Q Consensus       265 ~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~---------~~~diws~G~v~-~~ld~~~~~~~~~-----  329 (392)
                      .++.+||+|||+++.+..... ......|+..|++ ||..         .+.|+|+.|+++ +++.++.++....     
T Consensus       141 ~~~~~~l~dfg~~~~~~~~~~-~~~~~~~~~~y~~-PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~~p~~~~~~~~~~  218 (267)
T cd06646         141 DNGDVKLADFGVAAKITATIA-KRKSFIGTPYWMA-PEVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRAL  218 (267)
T ss_pred             CCCCEEECcCccceeeccccc-ccCccccCccccC-HhHcccccCCCCcchhhHHHHHHHHHHHHhCCCCccccchhhhh
Confidence            999999999999987642211 1122467888999 6654         257999999866 3433322211100     


Q ss_pred             ---------------CHHHHHHHHHHHHhhcccCcCCCCCHHHHHHHH
Q 045577          330 ---------------SADELVKCIEVGLLCVQQRIEDWPTMSSVLTML  362 (392)
Q Consensus       330 ---------------~~~~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~L  362 (392)
                                     .......+.+++..|++.+|++||+++++++.|
T Consensus       219 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~l  266 (267)
T cd06646         219 FLMSKSNFQPPKLKDKTKWSSTFHNFVKISLTKNPKKRPTAERLLTHL  266 (267)
T ss_pred             eeeecCCCCCCCCccccccCHHHHHHHHHHhhCChhhCcCHHHHhcCC
Confidence                           001124566788899999999999999998754

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]

Probab=99.78  E-value=6.2e-20  Score=170.75  Aligned_cols=154  Identities=24%  Similarity=0.307  Sum_probs=114.1

Q ss_pred             eeEEecCccCCCcChhhhhh---hccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEcCC-CCCeEeeeec
Q 045577          201 VFLMFEGIKLPDKSEFTCEF---ECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAE-INPNISDFGP  276 (392)
Q Consensus       201 ~~lv~e~~~~~~l~~~~~~~---~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~~~-~~~kl~DFGl  276 (392)
                      ..+|||||+. ++.......   .-......+.-+..||.+||.|||+.   +|+||||||+|+|+|.+ +.+||+|||.
T Consensus        97 lnlVleymP~-tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh~~---~IcHRDIKPqNlLvD~~tg~LKicDFGS  172 (364)
T KOG0658|consen   97 LNLVLEYMPE-TLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLHSH---GICHRDIKPQNLLVDPDTGVLKICDFGS  172 (364)
T ss_pred             HHHHHHhchH-HHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHHhc---CcccCCCChheEEEcCCCCeEEeccCCc
Confidence            4689999985 333322211   11123333566899999999999997   99999999999999976 8899999999


Q ss_pred             eEEeCCCCcceeceeeecccccCchhHH-------HHHHHhcCCCcc-eeecccccCCCCCCHHHHHHHH----------
Q 045577          277 ARIFGDQTEEVTGRVIGTQTLKTVPELL-------QAWKLWSEGDPM-EIIDEQTKMKGPFSADELVKCI----------  338 (392)
Q Consensus       277 a~~~~~~~~~~~~~~~gt~~y~a~~~~~-------~~~diws~G~v~-~~ld~~~~~~~~~~~~~~~~~~----------  338 (392)
                      |+.+......  .....|+.|.| ||++       .+.|+||.||++ |++-+++.++++...+++..++          
T Consensus       173 AK~L~~~epn--iSYicSRyYRa-PELifga~~Yt~~IDiWSaGCV~aELl~g~plFpG~s~~dQL~eIik~lG~Pt~e~  249 (364)
T KOG0658|consen  173 AKVLVKGEPN--ISYICSRYYRA-PELIFGATEYTTSIDIWSAGCVMAELLKGQPLFPGDSSVDQLVEIIKVLGTPTRED  249 (364)
T ss_pred             ceeeccCCCc--eeEEEeccccC-HHHHcCccccCceeEEhhhhHHHHHHhcCCcccCCCCHHHHHHHHHHHhCCCCHHH
Confidence            9987632222  33566788888 6665       367999999987 7888888888877666666444          


Q ss_pred             ----------------------------------HHHHhhcccCcCCCCCHHHHHHH
Q 045577          339 ----------------------------------EVGLLCVQQRIEDWPTMSSVLTM  361 (392)
Q Consensus       339 ----------------------------------~i~~~Cl~~dp~~RPsm~eVv~~  361 (392)
                                                        ++..++++.+|.+|-+..|+++.
T Consensus       250 I~~mn~~y~~~~~p~ik~~~~~~~~~~~~~~d~~dll~~~L~Y~P~~R~~~~~~l~h  306 (364)
T KOG0658|consen  250 IKSMNPNYTEFKFPQIKAHPWHKVFFKRLPPDALDLLSKLLQYSPSKRLSALEALAH  306 (364)
T ss_pred             HhhcCcccccccCcccccccceeecccCCCHHHHHHHHHHhccChhhcCCHHHHhcc
Confidence                                              45568888899999888776643

>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase

Probab=99.78  E-value=4.3e-19  Score=164.78  Aligned_cols=175  Identities=19%  Similarity=0.262  Sum_probs=124.6

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhh-ccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEE
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFE-CSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLL  263 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~-~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll  263 (392)
                      |++.++.....+. ...+++|||++++++.....+.. .......+..++.|++.||.|||+.   +++|+||||+||++
T Consensus        60 ~~~i~~~~~~~~~-~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~---~i~H~dl~p~ni~i  135 (260)
T cd05073          60 HDKLVKLHAVVTK-EPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQR---NYIHRDLRAANILV  135 (260)
T ss_pred             CCCcceEEEEEcC-CCeEEEEEeCCCCcHHHHHHhCCccccCHHHHHHHHHHHHHHHHHHHhC---CccccccCcceEEE
Confidence            3444444333333 56799999999998877654432 2234455788999999999999997   89999999999999


Q ss_pred             cCCCCCeEeeeeceEEeCCCCcceeceeeecccccCchhHH------HHHHHhcCCCcc-eeec-ccccCCCCCCH----
Q 045577          264 DAEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIID-EQTKMKGPFSA----  331 (392)
Q Consensus       264 ~~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld-~~~~~~~~~~~----  331 (392)
                      +.++.+||+|||.+...............++..|++ ||..      ...|+|+.|+++ +++. +...+......    
T Consensus       136 ~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~y~~-PE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~~~~  214 (260)
T cd05073         136 SASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTA-PEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIR  214 (260)
T ss_pred             cCCCcEEECCCcceeeccCCCcccccCCcccccccC-HhHhccCCcCccccchHHHHHHHHHHhcCCCCCCCCCHHHHHH
Confidence            999999999999998764222222222345567888 6654      257999999876 4554 43333222111    


Q ss_pred             ------------HHHHHHHHHHHhhcccCcCCCCCHHHHHHHHcc
Q 045577          332 ------------DELVKCIEVGLLCVQQRIEDWPTMSSVLTMLSN  364 (392)
Q Consensus       332 ------------~~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~L~~  364 (392)
                                  .....+.+++.+|++.+|++||++.++.++|+.
T Consensus       215 ~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~L~~  259 (260)
T cd05073         215 ALERGYRMPRPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDD  259 (260)
T ss_pred             HHhCCCCCCCcccCCHHHHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence                        122356678889999999999999999999975

Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa

>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10

Probab=99.78  E-value=6.9e-19  Score=164.07  Aligned_cols=174  Identities=19%  Similarity=0.269  Sum_probs=125.7

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhh---hhccccchhhhhHHHHHHHhhhhcCcCCCCceeeccccccee
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCE---FECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNV  261 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~---~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NI  261 (392)
                      |++.++.....+.++..|++|||++++.+......   ..-......+.+++.|++.||.|||+..  +++|+||||.||
T Consensus        68 h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~--~i~H~dl~~~ni  145 (269)
T cd08528          68 HPNIVRYYKTFLENDRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHKEK--RIVHRDLTPNNI  145 (269)
T ss_pred             CCCeeeEEeeEccCCeEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhccCC--ceeecCCCHHHE
Confidence            55555555555566789999999999888654321   1112344557889999999999999632  799999999999


Q ss_pred             EEcCCCCCeEeeeeceEEeCCCCcceeceeeecccccCchhHH------HHHHHhcCCCcc-eeecccccCCCCC-----
Q 045577          262 LLDAEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIIDEQTKMKGPF-----  329 (392)
Q Consensus       262 ll~~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld~~~~~~~~~-----  329 (392)
                      +++.++.+||+|||++.......  ......|+..|++ ||..      ...|+|+.|+++ +++.+.+++....     
T Consensus       146 l~~~~~~~~l~dfg~~~~~~~~~--~~~~~~~~~~~~~-Pe~~~~~~~~~~~Dv~slG~ll~~l~~g~~p~~~~~~~~~~  222 (269)
T cd08528         146 MLGEDDKVTITDFGLAKQKQPES--KLTSVVGTILYSC-PEIVKNEPYGEKADVWAFGCILYQMCTLQPPFYSTNMLSLA  222 (269)
T ss_pred             EECCCCcEEEecccceeeccccc--ccccccCcccCcC-hhhhcCCCCchHHHHHHHHHHHHHHHhCCCcccccCHHHHH
Confidence            99999999999999998755322  2233567888998 6654      368999999766 4444432321111     


Q ss_pred             -----------CH-HHHHHHHHHHHhhcccCcCCCCCHHHHHHHHc
Q 045577          330 -----------SA-DELVKCIEVGLLCVQQRIEDWPTMSSVLTMLS  363 (392)
Q Consensus       330 -----------~~-~~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~L~  363 (392)
                                 .. .....+.+++.+|++.||++||++.+|..+|+
T Consensus       223 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rp~~~e~~~~~~  268 (269)
T cd08528         223 TKIVEAVYEPLPEGMYSEDVTDVITSCLTPDAEARPDIIQVSAMIS  268 (269)
T ss_pred             HHHhhccCCcCCcccCCHHHHHHHHHHCCCCCccCCCHHHHHHHhc
Confidence                       00 11245667888999999999999999999986

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.

>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

Probab=99.78  E-value=3e-19  Score=167.79  Aligned_cols=170  Identities=21%  Similarity=0.291  Sum_probs=120.0

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhh--ccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeE
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFE--CSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVL  262 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~--~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIl  262 (392)
                      |+++++.......++..|++|||+++ ++........  .......+..++.|++.||.|||+.   +++|+||||+||+
T Consensus        58 h~~i~~~~~~~~~~~~~~~v~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dl~p~nil  133 (285)
T cd07861          58 HPNIVCLQDVLMQESRLYLIFEFLSM-DLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCHSR---RVLHRDLKPQNLL  133 (285)
T ss_pred             CCCEeeeEEEEeeCCeEEEEEecCCC-CHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHHHhC---CeeecCCCHHHEE
Confidence            55566555554456779999999984 4443322211  2234555788999999999999998   8999999999999


Q ss_pred             EcCCCCCeEeeeeceEEeCCCCcceeceeeecccccCchhHH-------HHHHHhcCCCcc-eeecccccCCCCCCHHH-
Q 045577          263 LDAEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELL-------QAWKLWSEGDPM-EIIDEQTKMKGPFSADE-  333 (392)
Q Consensus       263 l~~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~-------~~~diws~G~v~-~~ld~~~~~~~~~~~~~-  333 (392)
                      ++.++.+||+|||++........ ......++..|+| ||..       ...|+|+.|+++ +++.+++.+.+....+. 
T Consensus       134 ~~~~~~~~l~dfg~~~~~~~~~~-~~~~~~~~~~y~a-PE~~~~~~~~~~~~Dv~slG~il~~l~tg~~~~~~~~~~~~~  211 (285)
T cd07861         134 IDNKGVIKLADFGLARAFGIPVR-VYTHEVVTLWYRA-PEVLLGSPRYSTPVDIWSIGTIFAEMATKKPLFHGDSEIDQL  211 (285)
T ss_pred             EcCCCcEEECcccceeecCCCcc-cccCCcccccccC-hHHhcCCCCcCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHH
Confidence            99999999999999986542211 1122356788999 6653       367999999876 55555444432211111 


Q ss_pred             -------------------------------------------HHHHHHHHHhhcccCcCCCCCHHHHHH
Q 045577          334 -------------------------------------------LVKCIEVGLLCVQQRIEDWPTMSSVLT  360 (392)
Q Consensus       334 -------------------------------------------~~~~~~i~~~Cl~~dp~~RPsm~eVv~  360 (392)
                                                                 ..++.+++.+|++.||++||++.+|+.
T Consensus       212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~ll~  281 (285)
T cd07861         212 FRIFRILGTPTEDVWPGVTSLPDYKNTFPKWKKGSLRSAVKNLDEDGLDLLEKMLIYDPAKRISAKKALN  281 (285)
T ss_pred             HHHHHHhCCCChhhhhcchhhHHHHhhccccCcchhHHhcCCCCHHHHHHHHHHhcCChhhCCCHHHHhc
Confidence                                                       123446888999999999999999875

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2

>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1

Probab=99.78  E-value=3.2e-19  Score=174.95  Aligned_cols=171  Identities=17%  Similarity=0.176  Sum_probs=119.5

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEc
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLD  264 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~  264 (392)
                      |++.++.......++..|++|||++++++.......  ......+..++.|++.||.|||+.   +|+||||||+||+++
T Consensus       102 hp~iv~~~~~~~~~~~~~lv~Ey~~gg~L~~~~~~~--~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDLkp~NIll~  176 (371)
T cd05622         102 SPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNY--DVPEKWARFYTAEVVLALDAIHSM---GFIHRDVKPDNMLLD  176 (371)
T ss_pred             CCCCCeEEEEEEcCCEEEEEEcCCCCCcHHHHHHhc--CCCHHHHHHHHHHHHHHHHHHHHC---CEEeCCCCHHHEEEC
Confidence            333333333333346789999999999987655432  234455677899999999999998   899999999999999


Q ss_pred             CCCCCeEeeeeceEEeCCCCcceeceeeecccccCchhHH----------HHHHHhcCCCcc-eeecccccCCCCCCH--
Q 045577          265 AEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELL----------QAWKLWSEGDPM-EIIDEQTKMKGPFSA--  331 (392)
Q Consensus       265 ~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~----------~~~diws~G~v~-~~ld~~~~~~~~~~~--  331 (392)
                      .++.+||+|||+++..............||+.|+| ||+.          .+.|+|+.|+++ +++.+..++......  
T Consensus       177 ~~~~ikL~DfG~a~~~~~~~~~~~~~~~gt~~y~a-PE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~  255 (371)
T cd05622         177 KSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYIS-PEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGT  255 (371)
T ss_pred             CCCCEEEEeCCceeEcCcCCcccccCcccCccccC-HHHHhccCCCccCCCccceeehhHHHHHHHhCCCCCCCCCHHHH
Confidence            99999999999998765332223334679999999 7754          257999999977 555554433222111  


Q ss_pred             -----------------HHHHHHHHHHHhhcccCcCC--CCCHHHHHHH
Q 045577          332 -----------------DELVKCIEVGLLCVQQRIED--WPTMSSVLTM  361 (392)
Q Consensus       332 -----------------~~~~~~~~i~~~Cl~~dp~~--RPsm~eVv~~  361 (392)
                                       .....+.+++..|++.++.+  ||++.++++.
T Consensus       256 ~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~~~~r~~r~~~~ei~~h  304 (371)
T cd05622         256 YSKIMNHKNSLTFPDDNDISKEAKNLICAFLTDREVRLGRNGVEEIKRH  304 (371)
T ss_pred             HHHHHcCCCcccCCCcCCCCHHHHHHHHHHcCChhhhcCCCCHHHHhcC
Confidence                             11223455677888744433  7888888875

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an

>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase

Probab=99.78  E-value=2.6e-19  Score=168.26  Aligned_cols=172  Identities=17%  Similarity=0.210  Sum_probs=122.1

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEc
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLD  264 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~  264 (392)
                      |++.++........+..|++|||++++++.....+......+..+..++.|++.||.|||+.   +++||||||+||+++
T Consensus        61 h~~ii~~~~~~~~~~~~~~v~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~qi~~~L~~LH~~---~i~H~dlkp~nili~  137 (282)
T cd06643          61 HPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTEPQIRVVCKQTLEALNYLHEN---KIIHRDLKAGNILFT  137 (282)
T ss_pred             CCCeeeEEEEEeeCCEEEEEEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCcccEEEc
Confidence            44444443333334678999999999988665433222334555788999999999999998   899999999999999


Q ss_pred             CCCCCeEeeeeceEEeCCCCcceeceeeecccccCchhHH-----------HHHHHhcCCCcc-eeecccccCCCCCCH-
Q 045577          265 AEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELL-----------QAWKLWSEGDPM-EIIDEQTKMKGPFSA-  331 (392)
Q Consensus       265 ~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~-----------~~~diws~G~v~-~~ld~~~~~~~~~~~-  331 (392)
                      .++.+||+|||++....... .......++..|++ ||+.           ...|+|+.|+++ +++.+.+++...... 
T Consensus       138 ~~~~~kl~dfg~~~~~~~~~-~~~~~~~~~~~y~a-PE~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~  215 (282)
T cd06643         138 LDGDIKLADFGVSAKNTRTI-QRRDSFIGTPYWMA-PEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEPPHHELNPMR  215 (282)
T ss_pred             cCCCEEEccccccccccccc-cccccccccccccC-HhhccccCCCCCCCCccchhhhHHHHHHHHccCCCCccccCHHH
Confidence            99999999999987643211 11223468889999 6654           268999999876 454443332211111 


Q ss_pred             -----------------HHHHHHHHHHHhhcccCcCCCCCHHHHHHH
Q 045577          332 -----------------DELVKCIEVGLLCVQQRIEDWPTMSSVLTM  361 (392)
Q Consensus       332 -----------------~~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~  361 (392)
                                       .....+.+++..|++.+|++||++.++++.
T Consensus       216 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~  262 (282)
T cd06643         216 VLLKIAKSEPPTLAQPSRWSSEFKDFLKKCLEKNVDARWTTTQLLQH  262 (282)
T ss_pred             HHHHHhhcCCCCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence                             112356678889999999999999988754

Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.

>PHA03211 serine/threonine kinase US3; Provisional

Probab=99.78  E-value=4.5e-19  Score=177.95  Aligned_cols=127  Identities=23%  Similarity=0.269  Sum_probs=97.8

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEc
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLD  264 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~  264 (392)
                      |++.++.......++..+++||++. +++............+..++.|+.|+++||.|||+.   +|+||||||+|||++
T Consensus       219 HpnIv~l~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~yLH~~---gIvHrDLKP~NILl~  294 (461)
T PHA03211        219 HPAVLALLDVRVVGGLTCLVLPKYR-SDLYTYLGARLRPLGLAQVTAVARQLLSAIDYIHGE---GIIHRDIKTENVLVN  294 (461)
T ss_pred             CCCCCcEEEEEEECCEEEEEEEccC-CCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CEEECcCCHHHEEEC
Confidence            7888887766555677899999996 455444333222345556889999999999999998   899999999999999


Q ss_pred             CCCCCeEeeeeceEEeCCCC-cceeceeeecccccCchhHH------HHHHHhcCCCcc
Q 045577          265 AEINPNISDFGPARIFGDQT-EEVTGRVIGTQTLKTVPELL------QAWKLWSEGDPM  316 (392)
Q Consensus       265 ~~~~~kl~DFGla~~~~~~~-~~~~~~~~gt~~y~a~~~~~------~~~diws~G~v~  316 (392)
                      .++.+||+|||+++...... ........||..|++ ||+.      ...|+|++|+++
T Consensus       295 ~~~~vkL~DFGla~~~~~~~~~~~~~~~~GT~~Y~A-PE~~~~~~~~~~sDvwSlGviL  352 (461)
T PHA03211        295 GPEDICLGDFGAACFARGSWSTPFHYGIAGTVDTNA-PEVLAGDPYTPSVDIWSAGLVI  352 (461)
T ss_pred             CCCCEEEcccCCceecccccccccccccCCCcCCcC-HHHHcCCCCCchHHHHHHHHHH
Confidence            99999999999998764221 112223569999999 7765      367999999876

>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1

Probab=99.78  E-value=2.7e-19  Score=174.84  Aligned_cols=159  Identities=19%  Similarity=0.220  Sum_probs=111.2

Q ss_pred             CCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEcCCCCCeEeeeece
Q 045577          198 DGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEINPNISDFGPA  277 (392)
Q Consensus       198 ~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~~~~~~kl~DFGla  277 (392)
                      +...|++|||++++++.....+... .....+..++.|++.||.|||+.   +|+||||||+|||++.++.+||+|||++
T Consensus        73 ~~~~~lv~E~~~gg~L~~~l~~~~~-l~~~~~~~~~~qi~~aL~~lH~~---givHrDlKp~NILi~~~~~vkL~DFGla  148 (363)
T cd05628          73 KLNLYLIMEFLPGGDMMTLLMKKDT-LTEEETQFYIAETVLAIDSIHQL---GFIHRDIKPDNLLLDSKGHVKLSDFGLC  148 (363)
T ss_pred             CCeEEEEEcCCCCCcHHHHHHhcCC-CCHHHHHHHHHHHHHHHHHHHhC---CeEecCCCHHHeEECCCCCEEEeeccCc
Confidence            4578999999999998876654432 34455788999999999999998   8999999999999999999999999998


Q ss_pred             EEeCCCCc----------------------------------ceeceeeecccccCchhHH------HHHHHhcCCCcc-
Q 045577          278 RIFGDQTE----------------------------------EVTGRVIGTQTLKTVPELL------QAWKLWSEGDPM-  316 (392)
Q Consensus       278 ~~~~~~~~----------------------------------~~~~~~~gt~~y~a~~~~~------~~~diws~G~v~-  316 (392)
                      +.+.....                                  .......||+.|+| ||+.      .+.|+|+.|+++ 
T Consensus       149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~a-PE~~~~~~~~~~~DvwSlGvil~  227 (363)
T cd05628         149 TGLKKAHRTEFYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIA-PEVFMQTGYNKLCDWWSLGVIMY  227 (363)
T ss_pred             ccccccccccccccccccccccccccccccccccchhhhccccccccccCCccccC-HHHHcCCCCCCchhhhhhHHHHH
Confidence            75431100                                  00123579999999 7765      367999999876 


Q ss_pred             eeecccccCCCCCCHHHHH-------------------HHHHHHHh--hcccCcCCCCCHHHHHHH
Q 045577          317 EIIDEQTKMKGPFSADELV-------------------KCIEVGLL--CVQQRIEDWPTMSSVLTM  361 (392)
Q Consensus       317 ~~ld~~~~~~~~~~~~~~~-------------------~~~~i~~~--Cl~~dp~~RPsm~eVv~~  361 (392)
                      +++.+..++.+....+...                   .+.+++..  |...++..||++++|++.
T Consensus       228 ell~G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~l~~~~~~r~~r~~~~ei~~h  293 (363)
T cd05628         228 EMLIGYPPFCSETPQETYKKVMNWKETLIFPPEVPISEKAKDLILRFCCEWEHRIGAPGVEEIKTN  293 (363)
T ss_pred             HHHhCCCCCCCCCHHHHHHHHHcCcCcccCCCcCCCCHHHHHHHHHHcCChhhcCCCCCHHHHhCC
Confidence            5555544443322211111                   22223332  433445567999999875

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus

>PHA03207 serine/threonine kinase US3; Provisional

Probab=99.77  E-value=2e-19  Score=177.67  Aligned_cols=171  Identities=21%  Similarity=0.215  Sum_probs=122.8

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEc
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLD  264 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~  264 (392)
                      |++.++...........|++||++.+ ++.... ..........++.++.|++.||.|||+.   +|+||||||+||+++
T Consensus       145 h~~iv~~~~~~~~~~~~~lv~e~~~~-~l~~~l-~~~~~l~~~~~~~i~~ql~~aL~~LH~~---givHrDlkp~Nill~  219 (392)
T PHA03207        145 HRAIINLIHAYRWKSTVCMVMPKYKC-DLFTYV-DRSGPLPLEQAITIQRRLLEALAYLHGR---GIIHRDVKTENIFLD  219 (392)
T ss_pred             CCCccceeeeEeeCCEEEEEehhcCC-CHHHHH-HhcCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEc
Confidence            77777776655555678999999874 444433 2222234555889999999999999998   899999999999999


Q ss_pred             CCCCCeEeeeeceEEeCCC-CcceeceeeecccccCchhHH------HHHHHhcCCCcc-eeecccccCCCCCC---HH-
Q 045577          265 AEINPNISDFGPARIFGDQ-TEEVTGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIIDEQTKMKGPFS---AD-  332 (392)
Q Consensus       265 ~~~~~kl~DFGla~~~~~~-~~~~~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld~~~~~~~~~~---~~-  332 (392)
                      .++.+||+|||+++..... .........||+.|+| ||+.      .+.|+|+.|+++ +++.++..+.+...   .. 
T Consensus       220 ~~~~~~l~DfG~a~~~~~~~~~~~~~~~~gt~~y~a-PE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~  298 (392)
T PHA03207        220 EPENAVLGDFGAACKLDAHPDTPQCYGWSGTLETNS-PELLALDPYCAKTDIWSAGLVLFEMSVKNVTLFGKQVKSSSSQ  298 (392)
T ss_pred             CCCCEEEccCccccccCcccccccccccccccCccC-HhHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCCCCcHHH
Confidence            9999999999999765422 1122234578999999 7765      368999999876 44444333322110   00 


Q ss_pred             ------------------------------------------------HHHHHHHHHHhhcccCcCCCCCHHHHHHH
Q 045577          333 ------------------------------------------------ELVKCIEVGLLCVQQRIEDWPTMSSVLTM  361 (392)
Q Consensus       333 ------------------------------------------------~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~  361 (392)
                                                                      ....+.+++..|++.+|++||++.++++.
T Consensus       299 l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~Rpsa~e~l~~  375 (392)
T PHA03207        299 LRSIIRCMQVHPLEFPQNGSTNLCKHFKQYAIVLRPPYTIPPVIRKYGMHMDVEYLIAKMLTFDQEFRPSAQDILSL  375 (392)
T ss_pred             HHHHHHHhccCccccCCccchhHHHHHHhhcccccCCccccchhhccCcchhHHHHHHHHhccChhhCCCHHHHhhC
Confidence                                                            01134456779999999999999998876

>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase

Probab=99.77  E-value=5.7e-19  Score=164.80  Aligned_cols=176  Identities=18%  Similarity=0.198  Sum_probs=125.6

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEc
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLD  264 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~  264 (392)
                      |++.++.... |.++..|++|||++++++.....+......+..+..++.|++.||.|||+.   +++|+||||+||+++
T Consensus        66 h~~i~~~~~~-~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~~~H~dl~p~nili~  141 (270)
T cd05056          66 HPHIVKLIGV-ITENPVWIVMELAPLGELRSYLQVNKYSLDLASLILYSYQLSTALAYLESK---RFVHRDIAARNVLVS  141 (270)
T ss_pred             CCchhceeEE-EcCCCcEEEEEcCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccccChheEEEe
Confidence            4444444332 335668999999999999876654333335555788999999999999998   899999999999999


Q ss_pred             CCCCCeEeeeeceEEeCCCCcceeceeeecccccCchhHH------HHHHHhcCCCcc-eeec-ccccCCCCCC------
Q 045577          265 AEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIID-EQTKMKGPFS------  330 (392)
Q Consensus       265 ~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld-~~~~~~~~~~------  330 (392)
                      .++.+|++|||+++..............++..|++ ||..      ...|+|++|+++ +++. +..++.+...      
T Consensus       142 ~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~y~a-PE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~~~~  220 (270)
T cd05056         142 SPDCVKLGDFGLSRYLEDESYYKASKGKLPIKWMA-PESINFRRFTSASDVWMFGVCMWEILMLGVKPFQGVKNNDVIGR  220 (270)
T ss_pred             cCCCeEEccCceeeecccccceecCCCCccccccC-hhhhccCCCCchhhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHH
Confidence            99999999999998764322222222234467888 6643      367999999876 4342 3323222111      


Q ss_pred             ----------HHHHHHHHHHHHhhcccCcCCCCCHHHHHHHHccC
Q 045577          331 ----------ADELVKCIEVGLLCVQQRIEDWPTMSSVLTMLSNE  365 (392)
Q Consensus       331 ----------~~~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~L~~~  365 (392)
                                ......+.+++.+|+..+|++||++.+++..|+..
T Consensus       221 ~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~~~~l~~~  265 (270)
T cd05056         221 IENGERLPMPPNCPPTLYSLMTKCWAYDPSKRPRFTELKAQLSDI  265 (270)
T ss_pred             HHcCCcCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence                      11223566788899999999999999999999875

Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions

>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4

Probab=99.77  E-value=3.3e-19  Score=167.87  Aligned_cols=155  Identities=23%  Similarity=0.287  Sum_probs=111.7

Q ss_pred             CCeeEEecCccCCCcChhhhhhh-ccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEcCCCCCeEeeeece
Q 045577          199 GEVFLMFEGIKLPDKSEFTCEFE-CSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEINPNISDFGPA  277 (392)
Q Consensus       199 ~~~~lv~e~~~~~~l~~~~~~~~-~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~~~~~~kl~DFGla  277 (392)
                      ...+++|||+.+ ++.....+.. .......+..++.|++.||.|||+.   +++||||||+||+++.++.+||+|||++
T Consensus        80 ~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dikp~Nili~~~~~~kl~dfg~~  155 (288)
T cd07863          80 TKVTLVFEHVDQ-DLRTYLDKVPPPGLPAETIKDLMRQFLRGLDFLHAN---CIVHRDLKPENILVTSGGQVKLADFGLA  155 (288)
T ss_pred             ceEEEEEccccc-CHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEECccCcc
Confidence            457999999985 5544333221 1234555788999999999999998   8999999999999999999999999999


Q ss_pred             EEeCCCCcceeceeeecccccCchhHH------HHHHHhcCCCcc-eeecccccCCCCCCHH------------------
Q 045577          278 RIFGDQTEEVTGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIIDEQTKMKGPFSAD------------------  332 (392)
Q Consensus       278 ~~~~~~~~~~~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld~~~~~~~~~~~~------------------  332 (392)
                      +......  ......|+..|+| ||..      .+.|+|+.|+++ +++.+.+.+.+....+                  
T Consensus       156 ~~~~~~~--~~~~~~~~~~y~a-PE~~~~~~~~~~~DiwslG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~  232 (288)
T cd07863         156 RIYSCQM--ALTPVVVTLWYRA-PEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWP  232 (288)
T ss_pred             ccccCcc--cCCCccccccccC-chHhhCCCCCCcchhhhHHHHHHHHHhCCcCcCCCCHHHHHHHHHHHhCCCChhhCc
Confidence            8754221  2223567889999 6654      367999999876 4444433322211111                  


Q ss_pred             ------------------------HHHHHHHHHHhhcccCcCCCCCHHHHHH
Q 045577          333 ------------------------ELVKCIEVGLLCVQQRIEDWPTMSSVLT  360 (392)
Q Consensus       333 ------------------------~~~~~~~i~~~Cl~~dp~~RPsm~eVv~  360 (392)
                                              ....+.+++..|++.||++||++.++++
T Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~~~l~  284 (288)
T cd07863         233 RDVTLPRGAFSPRGPRPVQSVVPEIEESGAQLLLEMLTFNPHKRISAFRALQ  284 (288)
T ss_pred             ccccccccccCCCCCCchHHhCcCcCHHHHHHHHHHhccCcccCCCHHHHhc
Confidence                                    1223467888999999999999998874

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou

>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=99.77  E-value=6.5e-19  Score=165.20  Aligned_cols=163  Identities=19%  Similarity=0.252  Sum_probs=118.4

Q ss_pred             CCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEcCCCCCeEeeeeceE
Q 045577          199 GEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEINPNISDFGPAR  278 (392)
Q Consensus       199 ~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~~~~~~kl~DFGla~  278 (392)
                      ...+++|||++++++...............+..++.|++.||.|||+.   +++|+||||+||+++.++.+||+|||++.
T Consensus        81 ~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~l~~aL~~lH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~~~  157 (284)
T cd05038          81 RSLRLIMEYLPSGSLRDYLQRHRDQINLKRLLLFSSQICKGMDYLGSQ---RYIHRDLAARNILVESEDLVKISDFGLAK  157 (284)
T ss_pred             CceEEEEecCCCCCHHHHHHhCccccCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHhEEEcCCCCEEEccccccc
Confidence            468999999999988776544332344555788999999999999998   89999999999999999999999999998


Q ss_pred             EeCCCCcce--eceeeecccccCchhHH------HHHHHhcCCCcc-eeecccccCCCCC--------------------
Q 045577          279 IFGDQTEEV--TGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIIDEQTKMKGPF--------------------  329 (392)
Q Consensus       279 ~~~~~~~~~--~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld~~~~~~~~~--------------------  329 (392)
                      .........  .....++..|++ |+..      ...|+|+.|+++ +++.+........                    
T Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~-Pe~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~  236 (284)
T cd05038         158 VLPEDKDYYYVKEPGESPIFWYA-PECLRTSKFSSASDVWSFGVTLYELFTYGDPSQSPPAEFLRMIGIAQGQMIVTRLL  236 (284)
T ss_pred             ccccCCcceeccCCCCCcccccC-cHHHccCCCCcccchHHHhhhhheeeccCCCcccccchhccccccccccccHHHHH
Confidence            765221111  111233455777 5543      367999999876 5554422211110                    


Q ss_pred             -----------CHHHHHHHHHHHHhhcccCcCCCCCHHHHHHHHccC
Q 045577          330 -----------SADELVKCIEVGLLCVQQRIEDWPTMSSVLTMLSNE  365 (392)
Q Consensus       330 -----------~~~~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~L~~~  365 (392)
                                 +......+.+++.+|++.+|++||+|.+|+++|+..
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~i  283 (284)
T cd05038         237 ELLKEGERLPRPPSCPDEVYDLMKLCWEAEPQDRPSFADLILIVDRL  283 (284)
T ss_pred             HHHHcCCcCCCCccCCHHHHHHHHHHhccChhhCCCHHHHHHHHhhc
Confidence                       001123567888999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut

>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha

Probab=99.77  E-value=2.8e-19  Score=171.92  Aligned_cols=152  Identities=18%  Similarity=0.196  Sum_probs=114.3

Q ss_pred             CCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEcCCCCCeEeeeece
Q 045577          198 DGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEINPNISDFGPA  277 (392)
Q Consensus       198 ~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~~~~~~kl~DFGla  277 (392)
                      .+..|+||||++++++.....+... ..+..+..++.|++.||.|||+.   +++||||||+||+++.++.+||+|||++
T Consensus        73 ~~~~~lv~Ey~~~g~L~~~i~~~~~-l~~~~~~~i~~qi~~al~~lH~~---~ivHrDikp~Nill~~~~~ikL~Dfg~~  148 (323)
T cd05615          73 VDRLYFVMEYVNGGDLMYHIQQVGK-FKEPQAVFYAAEISVGLFFLHRR---GIIYRDLKLDNVMLDSEGHIKIADFGMC  148 (323)
T ss_pred             CCEEEEEEcCCCCCcHHHHHHHcCC-CCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHeEECCCCCEEEeccccc
Confidence            4568999999999998776554333 33445788999999999999998   8999999999999999999999999998


Q ss_pred             EEeCCCCcceeceeeecccccCchhHHH------HHHHhcCCCcc-eeecccccCCCCCCHH---------------HHH
Q 045577          278 RIFGDQTEEVTGRVIGTQTLKTVPELLQ------AWKLWSEGDPM-EIIDEQTKMKGPFSAD---------------ELV  335 (392)
Q Consensus       278 ~~~~~~~~~~~~~~~gt~~y~a~~~~~~------~~diws~G~v~-~~ld~~~~~~~~~~~~---------------~~~  335 (392)
                      +...... .......||+.|+| ||+..      +.|+|+.|+++ +++.+..++.+.....               ...
T Consensus       149 ~~~~~~~-~~~~~~~gt~~y~a-PE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~~~~~~i~~~~~~~p~~~~~  226 (323)
T cd05615         149 KEHMVDG-VTTRTFCGTPDYIA-PEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDELFQSIMEHNVSYPKSLSK  226 (323)
T ss_pred             cccCCCC-ccccCccCCccccC-HHHHcCCCCCCccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCccCCH
Confidence            7543211 12233568999999 77653      57999999876 5666644443322211               122


Q ss_pred             HHHHHHHhhcccCcCCCCCH
Q 045577          336 KCIEVGLLCVQQRIEDWPTM  355 (392)
Q Consensus       336 ~~~~i~~~Cl~~dp~~RPsm  355 (392)
                      .+.+++.+|++.+|.+|++.
T Consensus       227 ~~~~li~~~l~~~p~~R~~~  246 (323)
T cd05615         227 EAVSICKGLMTKHPSKRLGC  246 (323)
T ss_pred             HHHHHHHHHcccCHhhCCCC
Confidence            45567889999999999974

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a

>smart00219 TyrKc Tyrosine kinase, catalytic domain

Probab=99.77  E-value=6.9e-19  Score=162.40  Aligned_cols=174  Identities=22%  Similarity=0.233  Sum_probs=125.6

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhcc-ccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEE
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECS-KYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLL  263 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~-~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll  263 (392)
                      |+++++........+..+++|||++++++.......... .....+..++.|++.||.|||+.   +++|+||||+||++
T Consensus        60 ~~~i~~~~~~~~~~~~~~~i~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lh~~---~~~h~dl~~~nil~  136 (258)
T smart00219       60 HPNIVKLLGVCTEEEPLMIVMEYMEGGDLLDYLRKNRPKELSLSDLLSFALQIARGMEYLESK---NFIHRDLAARNCLV  136 (258)
T ss_pred             CCchheEEEEEcCCCeeEEEEeccCCCCHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHHhcC---CeeecccccceEEE
Confidence            555555555555557899999999999887755443332 45555789999999999999998   89999999999999


Q ss_pred             cCCCCCeEeeeeceEEeCCCCcceeceeeecccccCchhHH------HHHHHhcCCCcc-eeec-ccccCCCCC------
Q 045577          264 DAEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIID-EQTKMKGPF------  329 (392)
Q Consensus       264 ~~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld-~~~~~~~~~------  329 (392)
                      +.++.+|++|||+++..............++..|++ ||..      .+.|+|+.|+++ +++. +.+.+....      
T Consensus       137 ~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~~-Pe~~~~~~~~~~~Di~slG~i~~~l~~~g~~p~~~~~~~~~~~  215 (258)
T smart00219      137 GENLVVKISDFGLSRDLYDDDYYKKKGGKLPIRWMA-PESLKDGKFTSKSDVWSFGVLLWEIFTLGESPYPGMSNEEVLE  215 (258)
T ss_pred             ccCCeEEEcccCCceecccccccccccCCCcccccC-hHHhccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCHHHHHH
Confidence            999999999999998765332211112236778988 6644      367999999876 3433 222221111      


Q ss_pred             ----------CHHHHHHHHHHHHhhcccCcCCCCCHHHHHHHH
Q 045577          330 ----------SADELVKCIEVGLLCVQQRIEDWPTMSSVLTML  362 (392)
Q Consensus       330 ----------~~~~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~L  362 (392)
                                .......+.+++.+|+..+|++||++.++++.|
T Consensus       216 ~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~l  258 (258)
T smart00219      216 YLKKGYRLPKPENCPPEIYKLMLQCWAEDPEDRPTFSELVEIL  258 (258)
T ss_pred             HHhcCCCCCCCCcCCHHHHHHHHHHCcCChhhCcCHHHHHhhC
Confidence                      111234566788899999999999999999875

Phosphotransferases. Tyrosine-specific kinase subfamily.

>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=99.77  E-value=3.5e-19  Score=164.74  Aligned_cols=156  Identities=17%  Similarity=0.181  Sum_probs=115.2

Q ss_pred             CCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEcCCC-------CCeE
Q 045577          199 GEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEI-------NPNI  271 (392)
Q Consensus       199 ~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~~~~-------~~kl  271 (392)
                      +..+++|||++++++...............+..++.|++.||.|||+.   +++||||||+||+++.++       .+||
T Consensus        73 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dlkp~Nill~~~~~~~~~~~~~kl  149 (259)
T cd05037          73 DENIMVEEYVKFGPLDVFLHREKNNVSLHWKLDVAKQLASALHYLEDK---KLVHGNVCGKNILVARYGLNEGYVPFIKL  149 (259)
T ss_pred             CCcEEEEEcCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhhC---CeecccCccceEEEecCccccCCceeEEe
Confidence            567999999999999876555443344555788999999999999998   899999999999999887       7999


Q ss_pred             eeeeceEEeCCCCcceeceeeecccccCchhHH--------HHHHHhcCCCcc-eeecc-cccCCCCCC-----------
Q 045577          272 SDFGPARIFGDQTEEVTGRVIGTQTLKTVPELL--------QAWKLWSEGDPM-EIIDE-QTKMKGPFS-----------  330 (392)
Q Consensus       272 ~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~--------~~~diws~G~v~-~~ld~-~~~~~~~~~-----------  330 (392)
                      +|||++.....     .....++..|++ ||..        ...|+|+.|+++ +++.. ...+.....           
T Consensus       150 ~Dfg~a~~~~~-----~~~~~~~~~y~a-PE~~~~~~~~~~~~~Di~slG~~~~~l~~~~~~p~~~~~~~~~~~~~~~~~  223 (259)
T cd05037         150 SDPGIPITVLS-----REERVERIPWIA-PECIRNGQASLTIAADKWSFGTTLLEICSNGEEPLSTLSSSEKERFYQDQH  223 (259)
T ss_pred             CCCCccccccc-----ccccccCCCccC-hhhhcCCCCCcchhhHHHHHHHHHHHHHhCCCCCcccCCchhHHHHHhcCC
Confidence            99999876532     112345667888 5543        358999999865 44332 111111100           


Q ss_pred             ---HHHHHHHHHHHHhhcccCcCCCCCHHHHHHHHc
Q 045577          331 ---ADELVKCIEVGLLCVQQRIEDWPTMSSVLTMLS  363 (392)
Q Consensus       331 ---~~~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~L~  363 (392)
                         ......+.+++..|++.+|++||++.+|++.|+
T Consensus       224 ~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~  259 (259)
T cd05037         224 RLPMPDCAELANLINQCWTYDPTKRPSFRAILRDLN  259 (259)
T ss_pred             CCCCCCchHHHHHHHHHhccChhhCCCHHHHHHhcC
Confidence               111246678888999999999999999999874

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki

>PHA03209 serine/threonine kinase US3; Provisional

Probab=99.77  E-value=2.7e-19  Score=174.51  Aligned_cols=125  Identities=21%  Similarity=0.202  Sum_probs=96.3

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEc
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLD  264 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~  264 (392)
                      |++.++........+..+++||++.+ ++............+..+..|+.|++.||.|||+.   +|+||||||+||+++
T Consensus       116 h~~iv~~~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~Nill~  191 (357)
T PHA03209        116 HPSVIRMKDTLVSGAITCMVLPHYSS-DLYTYLTKRSRPLPIDQALIIEKQILEGLRYLHAQ---RIIHRDVKTENIFIN  191 (357)
T ss_pred             CCCCcChhheEEeCCeeEEEEEccCC-cHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEC
Confidence            77777776666556778999999974 55444444333345566789999999999999998   899999999999999


Q ss_pred             CCCCCeEeeeeceEEeCCCCcceeceeeecccccCchhHH------HHHHHhcCCCcc
Q 045577          265 AEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELL------QAWKLWSEGDPM  316 (392)
Q Consensus       265 ~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~------~~~diws~G~v~  316 (392)
                      .++.+||+|||+++.....  .......||..|+| ||..      .+.|+|+.|+++
T Consensus       192 ~~~~~kl~DfG~a~~~~~~--~~~~~~~gt~~y~a-PE~~~~~~~~~~~DiwSlGvvl  246 (357)
T PHA03209        192 DVDQVCIGDLGAAQFPVVA--PAFLGLAGTVETNA-PEVLARDKYNSKADIWSAGIVL  246 (357)
T ss_pred             CCCCEEEecCccccccccC--cccccccccccccC-CeecCCCCCCchhhHHHHHHHH
Confidence            9999999999998753311  12223568999999 6543      478999999876

>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor

Probab=99.77  E-value=3.7e-19  Score=174.59  Aligned_cols=159  Identities=18%  Similarity=0.217  Sum_probs=112.6

Q ss_pred             CCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEcCCCCCeEeeeec
Q 045577          197 GDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEINPNISDFGP  276 (392)
Q Consensus       197 ~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~~~~~~kl~DFGl  276 (392)
                      .++..|++|||++++++.....+.. ...+..+..++.||+.||.|||+.   +|+||||||+||+++.++.+||+|||+
T Consensus        72 ~~~~~~lv~E~~~~g~L~~~i~~~~-~~~~~~~~~~~~qi~~al~~lH~~---~ivHrDlkp~Nill~~~~~ikL~DFG~  147 (376)
T cd05598          72 DKDNLYFVMDYIPGGDMMSLLIRLG-IFEEDLARFYIAELTCAIESVHKM---GFIHRDIKPDNILIDRDGHIKLTDFGL  147 (376)
T ss_pred             cCCEEEEEEeCCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCCHHHEEECCCCCEEEEeCCC
Confidence            3567899999999999987654433 234455677899999999999998   899999999999999999999999999


Q ss_pred             eEEeCCC------------------------------------------CcceeceeeecccccCchhHHH------HHH
Q 045577          277 ARIFGDQ------------------------------------------TEEVTGRVIGTQTLKTVPELLQ------AWK  308 (392)
Q Consensus       277 a~~~~~~------------------------------------------~~~~~~~~~gt~~y~a~~~~~~------~~d  308 (392)
                      +..+...                                          .........||+.|+| ||+..      +.|
T Consensus       148 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~a-PE~~~~~~~~~~~D  226 (376)
T cd05598         148 CTGFRWTHDSKYYQKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIA-PEVLLRTGYTQLCD  226 (376)
T ss_pred             CccccccccccccccccccccccccccccccccccccccchhhhhhhhcccccccccCCCccccC-HHHHcCCCCCccee
Confidence            7532100                                          0001112479999999 77653      579


Q ss_pred             HhcCCCcc-eeecccccCCCCCCHHH-------------------HHHHHHHHHhhcccCcCCCC---CHHHHHHH
Q 045577          309 LWSEGDPM-EIIDEQTKMKGPFSADE-------------------LVKCIEVGLLCVQQRIEDWP---TMSSVLTM  361 (392)
Q Consensus       309 iws~G~v~-~~ld~~~~~~~~~~~~~-------------------~~~~~~i~~~Cl~~dp~~RP---sm~eVv~~  361 (392)
                      +|+.|+++ +++.+..++.+....+.                   ...+.+++..|+ .+|.+|+   ++.++++.
T Consensus       227 iwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~l~-~~p~~R~~~~t~~ell~h  301 (376)
T cd05598         227 WWSVGVILYEMLVGQPPFLADTPAETQLKVINWETTLHIPSQAKLSREASDLILRLC-CGAEDRLGKNGADEIKAH  301 (376)
T ss_pred             eeeccceeeehhhCCCCCCCCCHHHHHHHHhccCccccCCCCCCCCHHHHHHHHHHh-cCHhhcCCCCCHHHHhCC
Confidence            99999987 55555444433322111                   113334555554 4999999   77887755

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.

>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

Probab=99.77  E-value=5.4e-19  Score=167.09  Aligned_cols=172  Identities=20%  Similarity=0.212  Sum_probs=123.0

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEc
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLD  264 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~  264 (392)
                      |++.++.....+.++..|++|||++++++.....+.........+..++.|++.||.|||+.   +++||||||+||+++
T Consensus        68 h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~---~i~H~dlkp~Nili~  144 (292)
T cd06644          68 HPYIVKLLGAFYWDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVICRQMLEALQYLHSM---KIIHRDLKAGNVLLT  144 (292)
T ss_pred             CCcEeeeEEEEEeCCeEEEEEecCCCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhcC---CeeecCCCcceEEEc
Confidence            44444444444445779999999999988654444333345566888999999999999998   899999999999999


Q ss_pred             CCCCCeEeeeeceEEeCCCCcceeceeeecccccCchhHH-----------HHHHHhcCCCcc-eeecccccCCCCCC--
Q 045577          265 AEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELL-----------QAWKLWSEGDPM-EIIDEQTKMKGPFS--  330 (392)
Q Consensus       265 ~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~-----------~~~diws~G~v~-~~ld~~~~~~~~~~--  330 (392)
                      .++.+||+|||++....... .......++..|++ ||+.           .+.|+|+.|+++ +++.+.+.+.....  
T Consensus       145 ~~~~~kl~dfg~~~~~~~~~-~~~~~~~~~~~y~a-PE~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~  222 (292)
T cd06644         145 LDGDIKLADFGVSAKNVKTL-QRRDSFIGTPYWMA-PEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMR  222 (292)
T ss_pred             CCCCEEEccCccceeccccc-cccceecCCccccC-ceeeccccccCCCCCchhhhHhHHHHHHHHhcCCCCCccccHHH
Confidence            99999999999987643211 11223467788988 6543           258999999876 45544333221110  


Q ss_pred             ----------------HHHHHHHHHHHHhhcccCcCCCCCHHHHHHH
Q 045577          331 ----------------ADELVKCIEVGLLCVQQRIEDWPTMSSVLTM  361 (392)
Q Consensus       331 ----------------~~~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~  361 (392)
                                      ......+.+++.+|++.+|++||++.++++.
T Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~  269 (292)
T cd06644         223 VLLKIAKSEPPTLSQPSKWSMEFRDFLKTALDKHPETRPSAAQLLEH  269 (292)
T ss_pred             HHHHHhcCCCccCCCCcccCHHHHHHHHHHhcCCcccCcCHHHHhcC
Confidence                            1112356678889999999999999998763

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.

>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin

Probab=99.77  E-value=6.5e-19  Score=165.73  Aligned_cols=158  Identities=21%  Similarity=0.259  Sum_probs=115.4

Q ss_pred             CCeeEEecCccCCCcChhhhhh---hccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEcCCCCCeEeeee
Q 045577          199 GEVFLMFEGIKLPDKSEFTCEF---ECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEINPNISDFG  275 (392)
Q Consensus       199 ~~~~lv~e~~~~~~l~~~~~~~---~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~~~~~~kl~DFG  275 (392)
                      +..|++|||++++++.......   ........+..++.|++.||.|||+.   +++||||||+||+++.++.+||+|||
T Consensus        93 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~nili~~~~~~kl~dfg  169 (286)
T cd06638          93 DQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLHVN---KTIHRDVKGNNILLTTEGGVKLVDFG  169 (286)
T ss_pred             CeEEEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHHhC---CccccCCCHHhEEECCCCCEEEccCC
Confidence            4689999999999987644321   11223444677999999999999998   89999999999999999999999999


Q ss_pred             ceEEeCCCCcceeceeeecccccCchhHH-----------HHHHHhcCCCcc-eeecccccCCCCCCHH-----------
Q 045577          276 PARIFGDQTEEVTGRVIGTQTLKTVPELL-----------QAWKLWSEGDPM-EIIDEQTKMKGPFSAD-----------  332 (392)
Q Consensus       276 la~~~~~~~~~~~~~~~gt~~y~a~~~~~-----------~~~diws~G~v~-~~ld~~~~~~~~~~~~-----------  332 (392)
                      +++...... .......|+..|+| ||..           .+.|+|+.|+++ +++.+..++......+           
T Consensus       170 ~~~~~~~~~-~~~~~~~~~~~y~a-PE~~~~~~~~~~~~~~~~Dv~slGvi~~el~~g~~p~~~~~~~~~~~~~~~~~~~  247 (286)
T cd06638         170 VSAQLTSTR-LRRNTSVGTPFWMA-PEVIACEQQLDSTYDARCDVWSLGITAIELGDGDPPLADLHPMRALFKIPRNPPP  247 (286)
T ss_pred             ceeecccCC-CccccccCCCcccC-hhhhchhhhccccccchhhhhhHHHHHHHHhcCCCCCCCCchhHHHhhccccCCC
Confidence            998764221 12223468899999 6643           367999999876 4444432222111100           


Q ss_pred             -------HHHHHHHHHHhhcccCcCCCCCHHHHHHH
Q 045577          333 -------ELVKCIEVGLLCVQQRIEDWPTMSSVLTM  361 (392)
Q Consensus       333 -------~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~  361 (392)
                             ....+.+++.+|++.+|++||++.++++.
T Consensus       248 ~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~  283 (286)
T cd06638         248 TLHQPELWSNEFNDFIRKCLTKDYEKRPTVSDLLQH  283 (286)
T ss_pred             cccCCCCcCHHHHHHHHHHccCCcccCCCHHHHhhc
Confidence                   12346778889999999999999999875

Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear

>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

Probab=99.77  E-value=4.1e-19  Score=165.74  Aligned_cols=157  Identities=21%  Similarity=0.276  Sum_probs=116.6

Q ss_pred             CCeeEEecCccCCCcChhhhhh-hccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEcCCCCCeEeeeece
Q 045577          199 GEVFLMFEGIKLPDKSEFTCEF-ECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEINPNISDFGPA  277 (392)
Q Consensus       199 ~~~~lv~e~~~~~~l~~~~~~~-~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~~~~~~kl~DFGla  277 (392)
                      ...|++|||++++++....... .....+..+..++.|++.||.|||+.   +|+|+|+||+||+++.++.+||+|||++
T Consensus        82 ~~~~iv~e~~~~~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~---~ivh~dl~~~nili~~~~~~~l~Dfg~~  158 (272)
T cd06637          82 DQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQH---KVIHRDIKGQNVLLTENAEVKLVDFGVS  158 (272)
T ss_pred             cEEEEEEEcCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCHHHEEECCCCCEEEccCCCc
Confidence            4579999999999887754432 22334555788999999999999998   8999999999999999999999999998


Q ss_pred             EEeCCCCcceeceeeecccccCchhHHH-----------HHHHhcCCCcc-eeecccccCCCCC----------------
Q 045577          278 RIFGDQTEEVTGRVIGTQTLKTVPELLQ-----------AWKLWSEGDPM-EIIDEQTKMKGPF----------------  329 (392)
Q Consensus       278 ~~~~~~~~~~~~~~~gt~~y~a~~~~~~-----------~~diws~G~v~-~~ld~~~~~~~~~----------------  329 (392)
                      ....... .......|+..|++ ||+..           ..|+|+.|+++ +++.+..++....                
T Consensus       159 ~~~~~~~-~~~~~~~g~~~y~a-PE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~  236 (272)
T cd06637         159 AQLDRTV-GRRNTFIGTPYWMA-PEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIPRNPAPRL  236 (272)
T ss_pred             eeccccc-ccCCcccccccccC-HhHhccccCcCCCCCchhhHHHHHHHHHHHHhCCCCccccCHHHHHHHHhcCCCCCC
Confidence            8654211 12233568889999 66542           58999999876 5555533321110                


Q ss_pred             -CHHHHHHHHHHHHhhcccCcCCCCCHHHHHH
Q 045577          330 -SADELVKCIEVGLLCVQQRIEDWPTMSSVLT  360 (392)
Q Consensus       330 -~~~~~~~~~~i~~~Cl~~dp~~RPsm~eVv~  360 (392)
                       .......+.+++.+|++.+|.+||++.+++.
T Consensus       237 ~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~  268 (272)
T cd06637         237 KSKKWSKKFQSFIESCLVKNHSQRPTTEQLMK  268 (272)
T ss_pred             CCCCcCHHHHHHHHHHcCCChhhCCCHHHHhh
Confidence             0111235677888999999999999999875

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ

>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases

Probab=99.77  E-value=7.2e-19  Score=163.09  Aligned_cols=164  Identities=21%  Similarity=0.276  Sum_probs=119.3

Q ss_pred             CCCCeeEEecCccCCCcChhhhhhh-ccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEcCCCCCeEeeee
Q 045577          197 GDGEVFLMFEGIKLPDKSEFTCEFE-CSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEINPNISDFG  275 (392)
Q Consensus       197 ~~~~~~lv~e~~~~~~l~~~~~~~~-~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~~~~~~kl~DFG  275 (392)
                      .+...+++|||++++++.....+.. +......+..++.|++.||.|||+.   +++|+||||+||+++.++.+|++|||
T Consensus        72 ~~~~~~~v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~i~~al~~lh~~---~i~h~di~p~nili~~~~~~~l~d~g  148 (261)
T cd05034          72 EEEPIYIVTEYMSKGSLLDFLKSGEGKKLRLPQLVDMAAQIAEGMAYLESR---NYIHRDLAARNILVGENLVCKIADFG  148 (261)
T ss_pred             cCCceEEEEeccCCCCHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCcchheEEEcCCCCEEECccc
Confidence            3467899999999998876554332 2234555788999999999999998   89999999999999999999999999


Q ss_pred             ceEEeCCCCcceeceeeecccccCchhHH------HHHHHhcCCCcc-eeec-ccccCCCCC----------------CH
Q 045577          276 PARIFGDQTEEVTGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIID-EQTKMKGPF----------------SA  331 (392)
Q Consensus       276 la~~~~~~~~~~~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld-~~~~~~~~~----------------~~  331 (392)
                      +++.+............++..|++ ||..      .+.|+|+.|+++ +++. +...+.+..                +.
T Consensus       149 ~~~~~~~~~~~~~~~~~~~~~y~~-PE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~  227 (261)
T cd05034         149 LARLIEDDEYTAREGAKFPIKWTA-PEAANYGRFTIKSDVWSFGILLTEIVTYGRVPYPGMTNREVLEQVERGYRMPRPP  227 (261)
T ss_pred             cceeccchhhhhhhccCCCccccC-HHHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCC
Confidence            998764221111112234567888 6644      368999999876 4444 433222211                11


Q ss_pred             HHHHHHHHHHHhhcccCcCCCCCHHHHHHHHcc
Q 045577          332 DELVKCIEVGLLCVQQRIEDWPTMSSVLTMLSN  364 (392)
Q Consensus       332 ~~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~L~~  364 (392)
                      .....+.+++.+|++.+|++||++.++++.|+.
T Consensus       228 ~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~l~~  260 (261)
T cd05034         228 NCPEELYDLMLQCWDKDPEERPTFEYLQSFLED  260 (261)
T ss_pred             CCCHHHHHHHHHHcccCcccCCCHHHHHHHHhc
Confidence            122456778889999999999999999999875

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t

>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]

Probab=99.77  E-value=2.5e-19  Score=187.17  Aligned_cols=157  Identities=20%  Similarity=0.247  Sum_probs=119.5

Q ss_pred             CeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEcCCCCCeEeeeeceEE
Q 045577          200 EVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEINPNISDFGPARI  279 (392)
Q Consensus       200 ~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~~~~~~kl~DFGla~~  279 (392)
                      -+|+.||||+...+...+.+..+......+.+++.+|+.||.|+|+.   +||||||||.||+++++..+||.|||+|..
T Consensus       670 ~LYIQMEyCE~~ll~~iI~~N~~~~~~d~~wrLFreIlEGLaYIH~~---giIHRDLKP~NIFLd~~~~VKIGDFGLAt~  746 (1351)
T KOG1035|consen  670 ILYIQMEYCEKTLLRDIIRRNHFNSQRDEAWRLFREILEGLAYIHDQ---GIIHRDLKPRNIFLDSRNSVKIGDFGLATD  746 (1351)
T ss_pred             EEEEEHhhhhhhHHHHHHHhcccchhhHHHHHHHHHHHHHHHHHHhC---ceeeccCCcceeEEcCCCCeeecccccchh
Confidence            47999999998888887777766644555788999999999999999   899999999999999999999999999987


Q ss_pred             eC------C----------C-CcceeceeeecccccCchhHH---------HHHHHhcCCCcc-eeec------------
Q 045577          280 FG------D----------Q-TEEVTGRVIGTQTLKTVPELL---------QAWKLWSEGDPM-EIID------------  320 (392)
Q Consensus       280 ~~------~----------~-~~~~~~~~~gt~~y~a~~~~~---------~~~diws~G~v~-~~ld------------  320 (392)
                      ..      +          . .....+..+||.-|+| ||+.         .+.|++++|.++ |++.            
T Consensus       747 ~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGTalYvA-PEll~~~~~~~Yn~KiDmYSLGIVlFEM~yPF~TsMERa~iL  825 (1351)
T KOG1035|consen  747 LKENLESIDQDLSFSTNRAGSNDGDLTSQVGTALYVA-PELLSDTSSNKYNSKIDMYSLGIVLFEMLYPFGTSMERASIL  825 (1351)
T ss_pred             hhhhhhhHhhccCccccccCCCCcccccccceeeeec-HHHhcccccccccchhhhHHHHHHHHHHhccCCchHHHHHHH
Confidence            21      0          0 1112344789999999 6655         367999999876 3322            


Q ss_pred             -----ccccCCCCCCHHHHHHHHHHHHhhcccCcCCCCCHHHHHH
Q 045577          321 -----EQTKMKGPFSADELVKCIEVGLLCVQQRIEDWPTMSSVLT  360 (392)
Q Consensus       321 -----~~~~~~~~~~~~~~~~~~~i~~~Cl~~dp~~RPsm~eVv~  360 (392)
                           +..+.+..+..++...-.+++.++++.||.+|||+.|+++
T Consensus       826 ~~LR~g~iP~~~~f~~~~~~~e~slI~~Ll~hdP~kRPtA~eLL~  870 (1351)
T KOG1035|consen  826 TNLRKGSIPEPADFFDPEHPEEASLIRWLLSHDPSKRPTATELLN  870 (1351)
T ss_pred             HhcccCCCCCCcccccccchHHHHHHHHHhcCCCccCCCHHHHhh
Confidence                 2111222233445555567888999999999999988875

>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

Probab=99.77  E-value=6.7e-19  Score=162.55  Aligned_cols=171  Identities=20%  Similarity=0.287  Sum_probs=124.8

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEc
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLD  264 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~  264 (392)
                      |+++++.......+...|+++||+.++++........-...+..+..++.|++.||.|||+.   +++|+||+|.||+++
T Consensus        57 ~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~~l~~lh~~---~i~H~dl~~~ni~~~  133 (256)
T cd06612          57 SPYIVKYYGSYFKNTDLWIVMEYCGAGSVSDIMKITNKTLTEEEIAAILYQTLKGLEYLHSN---KKIHRDIKAGNILLN  133 (256)
T ss_pred             CCcEeeeeeeeecCCcEEEEEecCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcceEEEC
Confidence            55555555544445778999999999988775543232335556788999999999999998   899999999999999


Q ss_pred             CCCCCeEeeeeceEEeCCCCcceeceeeecccccCchhHH------HHHHHhcCCCcc-eeecccccCCCCCC-------
Q 045577          265 AEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIIDEQTKMKGPFS-------  330 (392)
Q Consensus       265 ~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld~~~~~~~~~~-------  330 (392)
                      .++.+||+|||++........ ......++..|++ ||..      .+.|+|+.|+++ +++.+...+.....       
T Consensus       134 ~~~~~~l~dfg~~~~~~~~~~-~~~~~~~~~~y~~-PE~~~~~~~~~~~Di~s~G~il~~l~~g~~p~~~~~~~~~~~~~  211 (256)
T cd06612         134 EEGQAKLADFGVSGQLTDTMA-KRNTVIGTPFWMA-PEVIQEIGYNNKADIWSLGITAIEMAEGKPPYSDIHPMRAIFMI  211 (256)
T ss_pred             CCCcEEEcccccchhcccCcc-ccccccCCccccC-HHHHhcCCCCchhhHHHHHHHHHHHHhCCCCCCCcchhhhhhhh
Confidence            999999999999887643221 1223457888999 7765      368999999866 55554333221110       


Q ss_pred             -----------HHHHHHHHHHHHhhcccCcCCCCCHHHHHH
Q 045577          331 -----------ADELVKCIEVGLLCVQQRIEDWPTMSSVLT  360 (392)
Q Consensus       331 -----------~~~~~~~~~i~~~Cl~~dp~~RPsm~eVv~  360 (392)
                                 ......+.+++.+|++.+|++||++.+|++
T Consensus       212 ~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~il~  252 (256)
T cd06612         212 PNKPPPTLSDPEKWSPEFNDFVKKCLVKDPEERPSAIQLLQ  252 (256)
T ss_pred             ccCCCCCCCchhhcCHHHHHHHHHHHhcChhhCcCHHHHhc
Confidence                       111235677888999999999999999876

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a

>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

Probab=99.77  E-value=6e-19  Score=163.93  Aligned_cols=176  Identities=19%  Similarity=0.246  Sum_probs=126.4

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhh--h-hccccchhhhhHHHHHHHhhhhcCcCCCCceeeccccccee
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCE--F-ECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNV  261 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~--~-~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NI  261 (392)
                      |++.++.......++..+++|||++++++......  . ........+..++.+++.||.|||+.   +++|+||||+||
T Consensus        61 ~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~dl~p~ni  137 (267)
T cd08224          61 HPNVIKYLASFIENNELNIVLELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHSK---RIMHRDIKPANV  137 (267)
T ss_pred             CCCeeeeeeeeecCCeEEEEEecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHHhC---CEecCCcChhhE
Confidence            34444444444445678999999999998764432  1 12234555788999999999999998   899999999999


Q ss_pred             EEcCCCCCeEeeeeceEEeCCCCcceeceeeecccccCchhHH------HHHHHhcCCCcc-eeecccccCCCC------
Q 045577          262 LLDAEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIIDEQTKMKGP------  328 (392)
Q Consensus       262 ll~~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld~~~~~~~~------  328 (392)
                      +++.++.++|+|||++..+...... .....++..|++ ||..      ...|+|+.|+++ +++.+..++...      
T Consensus       138 l~~~~~~~~l~d~~~~~~~~~~~~~-~~~~~~~~~y~a-pE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~  215 (267)
T cd08224         138 FITATGVVKLGDLGLGRFFSSKTTA-AHSLVGTPYYMS-PERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYS  215 (267)
T ss_pred             EECCCCcEEEeccceeeeccCCCcc-cceecCCccccC-HHHhccCCCCchhcHHHHHHHHHHHHHCCCCcccCCccHHH
Confidence            9999999999999998875422211 223467888988 6654      257999999876 444433222111      


Q ss_pred             ------------CCH-HHHHHHHHHHHhhcccCcCCCCCHHHHHHHHccC
Q 045577          329 ------------FSA-DELVKCIEVGLLCVQQRIEDWPTMSSVLTMLSNE  365 (392)
Q Consensus       329 ------------~~~-~~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~L~~~  365 (392)
                                  .+. .....+.+++.+|++.+|++||++.+|+++|++.
T Consensus       216 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~il~~~~~~  265 (267)
T cd08224         216 LCKKIEKCDYPPLPADHYSEELRDLVSRCINPDPEKRPDISYVLQVAKEM  265 (267)
T ss_pred             HHhhhhcCCCCCCChhhcCHHHHHHHHHHcCCCcccCCCHHHHHHHHHHh
Confidence                        111 2223566788899999999999999999999865

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a

>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3

Probab=99.77  E-value=3.2e-19  Score=173.60  Aligned_cols=153  Identities=21%  Similarity=0.248  Sum_probs=110.9

Q ss_pred             CCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEcCCCCCeEeeeeceE
Q 045577          199 GEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEINPNISDFGPAR  278 (392)
Q Consensus       199 ~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~~~~~~kl~DFGla~  278 (392)
                      ...|++|||++++..... ..   ......+..++.|++.||.|||+.   +|+||||||+||+++.++.+||+|||+++
T Consensus        95 ~~~~lv~e~~~~~l~~~~-~~---~l~~~~~~~~~~qi~~aL~~LH~~---givHrDikp~Nill~~~~~~kl~Dfg~~~  167 (355)
T cd07874          95 QDVYLVMELMDANLCQVI-QM---ELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLAR  167 (355)
T ss_pred             ceeEEEhhhhcccHHHHH-hh---cCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChHHEEECCCCCEEEeeCcccc
Confidence            457999999986433221 11   123344677899999999999998   89999999999999999999999999998


Q ss_pred             EeCCCCcceeceeeecccccCchhHH------HHHHHhcCCCcc-eeecccccCCCCCC---------------------
Q 045577          279 IFGDQTEEVTGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIIDEQTKMKGPFS---------------------  330 (392)
Q Consensus       279 ~~~~~~~~~~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld~~~~~~~~~~---------------------  330 (392)
                      .....  .......||..|+| ||..      .+.|+|+.|+++ +++.++..+.+...                     
T Consensus       168 ~~~~~--~~~~~~~~t~~y~a-PE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (355)
T cd07874         168 TAGTS--FMMTPYVVTRYYRA-PEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKK  244 (355)
T ss_pred             cCCCc--cccCCccccCCccC-HHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHh
Confidence            65422  12233578999999 7764      368999999876 44444322221110                     


Q ss_pred             ------------------------------------HHHHHHHHHHHHhhcccCcCCCCCHHHHHHH
Q 045577          331 ------------------------------------ADELVKCIEVGLLCVQQRIEDWPTMSSVLTM  361 (392)
Q Consensus       331 ------------------------------------~~~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~  361 (392)
                                                          ......+.+++.+|++.||++|||+.|+++.
T Consensus       245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rps~~ell~h  311 (355)
T cd07874         245 LQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDEALQH  311 (355)
T ss_pred             hcHHHHHHHhcCCccccccchhhccccccccccccccccchHHHHHHHHHhcCCchhcCCHHHHhcC
Confidence                                                0011245678889999999999999999985

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok

>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.77  E-value=4.4e-19  Score=156.28  Aligned_cols=170  Identities=17%  Similarity=0.177  Sum_probs=134.4

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhccc-cchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEE
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSK-YSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLL  263 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~~-~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll  263 (392)
                      |++..|....+-.+...|+++||...|.+........+.. .+.....++.|+|.||.|+|.+   +||||||||+|+|+
T Consensus        81 hpnilrlY~~fhd~~riyLilEya~~gel~k~L~~~~~~~f~e~~~a~Yi~q~A~Al~y~h~k---~VIhRdiKpenlLl  157 (281)
T KOG0580|consen   81 HPNILRLYGYFHDSKRIYLILEYAPRGELYKDLQEGRMKRFDEQRAATYIKQLANALLYCHLK---RVIHRDIKPENLLL  157 (281)
T ss_pred             CccHHhhhhheeccceeEEEEEecCCchHHHHHHhcccccccccchhHHHHHHHHHHHHhccC---CcccCCCCHHHhcc
Confidence            8999999988887889999999999999887666444443 3444678999999999999998   89999999999999


Q ss_pred             cCCCCCeEeeeeceEEeCCCCcceeceeeecccccCchhHH------HHHHHhcCCCcc-eeecccccCCCCCCHHHHH-
Q 045577          264 DAEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIIDEQTKMKGPFSADELV-  335 (392)
Q Consensus       264 ~~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld~~~~~~~~~~~~~~~-  335 (392)
                      +.++..||+|||-+..-.   .....+.+||.-|.+ ||..      ..+|+|+.|++. +++-+.++|......+..+ 
T Consensus       158 g~~~~lkiAdfGwsV~~p---~~kR~tlcgt~dyl~-pEmv~~~~hd~~Vd~w~lgvl~yeflvg~ppFes~~~~etYkr  233 (281)
T KOG0580|consen  158 GSAGELKIADFGWSVHAP---SNKRKTLCGTLDYLP-PEMVEGRGHDKFVDLWSLGVLCYEFLVGLPPFESQSHSETYKR  233 (281)
T ss_pred             CCCCCeeccCCCceeecC---CCCceeeecccccCC-HhhcCCCCccchhhHHHHHHHHHHHHhcCCchhhhhhHHHHHH
Confidence            999999999999887643   334455899999999 7765      478999999865 5555555554443333333 


Q ss_pred             --------------HHHHHHHhhcccCcCCCCCHHHHHHH
Q 045577          336 --------------KCIEVGLLCVQQRIEDWPTMSSVLTM  361 (392)
Q Consensus       336 --------------~~~~i~~~Cl~~dp~~RPsm~eVv~~  361 (392)
                                    .+.+++..|+..+|.+|.+..||+..
T Consensus       234 I~k~~~~~p~~is~~a~dlI~~ll~~~p~~r~~l~~v~~h  273 (281)
T KOG0580|consen  234 IRKVDLKFPSTISGGAADLISRLLVKNPIERLALTEVMDH  273 (281)
T ss_pred             HHHccccCCcccChhHHHHHHHHhccCccccccHHHHhhh
Confidence                          34457789999999999999988753

>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.77  E-value=1.6e-19  Score=171.18  Aligned_cols=158  Identities=20%  Similarity=0.257  Sum_probs=117.0

Q ss_pred             CCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEcCCCCCeEeeeece
Q 045577          198 DGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEINPNISDFGPA  277 (392)
Q Consensus       198 ~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~~~~~~kl~DFGla  277 (392)
                      +..+.++|||+.+|.......... ...+....-|+.++..||.|||.+   +.+|||||+.||++..+|.+|++|||++
T Consensus        83 g~~LwiiMey~~gGsv~~lL~~~~-~~~E~~i~~ilre~l~~l~ylH~~---~kiHrDIKaanil~s~~g~vkl~DfgVa  158 (467)
T KOG0201|consen   83 GTKLWIIMEYCGGGSVLDLLKSGN-ILDEFEIAVILREVLKGLDYLHSE---KKIHRDIKAANILLSESGDVKLADFGVA  158 (467)
T ss_pred             cccHHHHHHHhcCcchhhhhccCC-CCccceeeeehHHHHHHhhhhhhc---ceecccccccceeEeccCcEEEEeccee
Confidence            567889999999998876432221 113444566789999999999998   8999999999999999999999999999


Q ss_pred             EEeCCCCcceeceeeecccccCchhHHH------HHHHhcCCCcc-eeecccccCC----------------CCCCHHHH
Q 045577          278 RIFGDQTEEVTGRVIGTQTLKTVPELLQ------AWKLWSEGDPM-EIIDEQTKMK----------------GPFSADEL  334 (392)
Q Consensus       278 ~~~~~~~~~~~~~~~gt~~y~a~~~~~~------~~diws~G~v~-~~ld~~~~~~----------------~~~~~~~~  334 (392)
                      ..+....... .+.+||+.||| ||+..      +.|||++|... ++..+.++..                +..+....
T Consensus       159 ~ql~~~~~rr-~tfvGTPfwMA-PEVI~~~~Y~~KADIWSLGITaiEla~GePP~s~~hPmrvlflIpk~~PP~L~~~~S  236 (467)
T KOG0201|consen  159 GQLTNTVKRR-KTFVGTPFWMA-PEVIKQSGYDTKADIWSLGITAIELAKGEPPHSKLHPMRVLFLIPKSAPPRLDGDFS  236 (467)
T ss_pred             eeeechhhcc-ccccccccccc-hhhhccccccchhhhhhhhHHHHHHhcCCCCCcccCcceEEEeccCCCCCccccccC
Confidence            8876433332 56899999999 77664      68999999754 4433332211                11111222


Q ss_pred             HHHHHHHHhhcccCcCCCCCHHHHHHH
Q 045577          335 VKCIEVGLLCVQQRIEDWPTMSSVLTM  361 (392)
Q Consensus       335 ~~~~~i~~~Cl~~dp~~RPsm~eVv~~  361 (392)
                      ..+.+++-.|++.+|+.||++.++++.
T Consensus       237 ~~~kEFV~~CL~k~P~~RpsA~~LLKh  263 (467)
T KOG0201|consen  237 PPFKEFVEACLDKNPEFRPSAKELLKH  263 (467)
T ss_pred             HHHHHHHHHHhhcCcccCcCHHHHhhh
Confidence            345666779999999999999987753

>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha

Probab=99.77  E-value=4.5e-19  Score=171.15  Aligned_cols=160  Identities=18%  Similarity=0.194  Sum_probs=113.5

Q ss_pred             CCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEcCCCCCeEeeeece
Q 045577          198 DGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEINPNISDFGPA  277 (392)
Q Consensus       198 ~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~~~~~~kl~DFGla  277 (392)
                      .+..|++|||++++++.....+......+..+..++.|++.||.|||+.   +|+||||||+||+++.++.+||+|||++
T Consensus        73 ~~~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~~~~qi~~al~~lH~~---~iiHrDlkp~Nili~~~~~~kL~DfG~a  149 (332)
T cd05623          73 ENNLYLVMDYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVIAIDSVHQL---HYVHRDIKPDNILMDMNGHIRLADFGSC  149 (332)
T ss_pred             CCEEEEEEeccCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHEEECCCCCEEEeecchh
Confidence            4678999999999999876655333344555778899999999999998   8999999999999999999999999999


Q ss_pred             EEeCCCCcceeceeeecccccCchhHHH-----------HHHHhcCCCcc-eeecccccCCCCCCHH-------------
Q 045577          278 RIFGDQTEEVTGRVIGTQTLKTVPELLQ-----------AWKLWSEGDPM-EIIDEQTKMKGPFSAD-------------  332 (392)
Q Consensus       278 ~~~~~~~~~~~~~~~gt~~y~a~~~~~~-----------~~diws~G~v~-~~ld~~~~~~~~~~~~-------------  332 (392)
                      +..............||+.|+| ||+..           ..|+|+.|+++ +++.++.++......+             
T Consensus       150 ~~~~~~~~~~~~~~~gt~~y~a-PE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~Pf~~~~~~~~~~~i~~~~~~~~  228 (332)
T cd05623         150 LKLMEDGTVQSSVAVGTPDYIS-PEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKERFQ  228 (332)
T ss_pred             eecccCCcceecccccCccccC-HHHHhccccCCCCCCCcCCEEeeHHHHHHHhcCCCCCCCCCHHHHHHHHhCCCcccc
Confidence            7654332223334579999999 77653           57999999876 5555543332211111             


Q ss_pred             -------HHHHHHHHHHhhcc--cCcCCCCCHHHHHHH
Q 045577          333 -------ELVKCIEVGLLCVQ--QRIEDWPTMSSVLTM  361 (392)
Q Consensus       333 -------~~~~~~~i~~~Cl~--~dp~~RPsm~eVv~~  361 (392)
                             ....+.+++..|+.  +++..|+++.++++.
T Consensus       229 ~p~~~~~~s~~~~~li~~ll~~~~~r~~r~~~~~~~~h  266 (332)
T cd05623         229 FPAQVTDVSEDAKDLIRRLICSREHRLGQNGIEDFKQH  266 (332)
T ss_pred             CCCccccCCHHHHHHHHHHccChhhhcCCCCHHHHhCC
Confidence                   11233444555554  344447888888765

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw

>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3

Probab=99.77  E-value=5.4e-19  Score=164.59  Aligned_cols=158  Identities=18%  Similarity=0.201  Sum_probs=116.2

Q ss_pred             CCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEcCCCCCeEeeeec
Q 045577          197 GDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEINPNISDFGP  276 (392)
Q Consensus       197 ~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~~~~~~kl~DFGl  276 (392)
                      ..+..|++|||++++++........ ......+..++.|++.||.|||+.   +++|+||||+||+++.++.+||+|||+
T Consensus        77 ~~~~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~nili~~~~~~~l~dfg~  152 (267)
T cd06645          77 RRDKLWICMEFCGGGSLQDIYHVTG-PLSESQIAYVSRETLQGLYYLHSK---GKMHRDIKGANILLTDNGHVKLADFGV  152 (267)
T ss_pred             eCCEEEEEEeccCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEECccee
Confidence            3567899999999999877543322 234555788999999999999998   899999999999999999999999999


Q ss_pred             eEEeCCCCcceeceeeecccccCchhHH---------HHHHHhcCCCcc-eeecccccCCCCCCH---------------
Q 045577          277 ARIFGDQTEEVTGRVIGTQTLKTVPELL---------QAWKLWSEGDPM-EIIDEQTKMKGPFSA---------------  331 (392)
Q Consensus       277 a~~~~~~~~~~~~~~~gt~~y~a~~~~~---------~~~diws~G~v~-~~ld~~~~~~~~~~~---------------  331 (392)
                      +....... .......|+..|+| ||..         .+.|+|+.|+++ +++.+..++....+.               
T Consensus       153 ~~~~~~~~-~~~~~~~~~~~y~a-PE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~  230 (267)
T cd06645         153 SAQITATI-AKRKSFIGTPYWMA-PEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALFLMTKSNFQPPK  230 (267)
T ss_pred             eeEccCcc-cccccccCcccccC-hhhhccccCCCCCchhhhHHHHHHHHHHhcCCCCcccccchhhHHhhhccCCCCCc
Confidence            87654221 11223568899999 7654         267999999876 444432222111100               


Q ss_pred             -----HHHHHHHHHHHhhcccCcCCCCCHHHHHH
Q 045577          332 -----DELVKCIEVGLLCVQQRIEDWPTMSSVLT  360 (392)
Q Consensus       332 -----~~~~~~~~i~~~Cl~~dp~~RPsm~eVv~  360 (392)
                           .....+.+++..|++.+|++||++.+|++
T Consensus       231 ~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~ll~  264 (267)
T cd06645         231 LKDKMKWSNSFHHFVKMALTKNPKKRPTAEKLLQ  264 (267)
T ss_pred             ccccCCCCHHHHHHHHHHccCCchhCcCHHHHhc
Confidence                 01124567888999999999999999875

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2

Probab=99.77  E-value=4.7e-19  Score=174.29  Aligned_cols=172  Identities=17%  Similarity=0.219  Sum_probs=118.6

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEc
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLD  264 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~  264 (392)
                      |++.++........+..|++|||++++++.....+.. ...+..+..++.|++.||.|||+.   +|+||||||+||+++
T Consensus        60 h~~iv~l~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~-~~~e~~~~~~~~qi~~aL~~LH~~---givHrDlKp~Nili~  135 (381)
T cd05626          60 NEWVVKLYYSFQDKDNLYFVMDYIPGGDMMSLLIRME-VFPEVLARFYIAELTLAIESVHKM---GFIHRDIKPDNILID  135 (381)
T ss_pred             CCCeeeeEEEEecCCEEEEEEecCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhC---CeeecCCcHHHEEEC
Confidence            4444444444344567899999999999876544332 234445677899999999999998   899999999999999


Q ss_pred             CCCCCeEeeeeceEEeCCCC----------------------------------------------cceeceeeeccccc
Q 045577          265 AEINPNISDFGPARIFGDQT----------------------------------------------EEVTGRVIGTQTLK  298 (392)
Q Consensus       265 ~~~~~kl~DFGla~~~~~~~----------------------------------------------~~~~~~~~gt~~y~  298 (392)
                      .++.+||+|||+++.+....                                              ........||+.|+
T Consensus       136 ~~~~~kL~DFGl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~  215 (381)
T cd05626         136 LDGHIKLTDFGLCTGFRWTHNSKYYQKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYI  215 (381)
T ss_pred             CCCCEEEeeCcCCcccccccccccccccccccccccCcccccccccccccccccchhhccccccccccccccccCCcccc
Confidence            99999999999975431000                                              00012346999999


Q ss_pred             CchhHH------HHHHHhcCCCcc-eeecccccCCCCCCHHHH-------------------HHHHHHHHh--hcccCcC
Q 045577          299 TVPELL------QAWKLWSEGDPM-EIIDEQTKMKGPFSADEL-------------------VKCIEVGLL--CVQQRIE  350 (392)
Q Consensus       299 a~~~~~------~~~diws~G~v~-~~ld~~~~~~~~~~~~~~-------------------~~~~~i~~~--Cl~~dp~  350 (392)
                      | ||+.      .+.|+|+.|+++ +++.+..++......+..                   ..+.+++..  |...++.
T Consensus       216 a-PE~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~dli~~ll~~~~~~~  294 (381)
T cd05626         216 A-PEVLLRKGYTQLCDWWSVGVILFEMLVGQPPFLAPTPTETQLKVINWENTLHIPPQVKLSPEAVDLITKLCCSAEERL  294 (381)
T ss_pred             C-HHHHcCCCCCCccceeehhhHHHHHHhCCCCCcCCCHHHHHHHHHccccccCCCCCCCCCHHHHHHHHHHccCccccc
Confidence            9 7765      267999999976 566665444332222111                   123344433  6677777


Q ss_pred             CCCCHHHHHHH
Q 045577          351 DWPTMSSVLTM  361 (392)
Q Consensus       351 ~RPsm~eVv~~  361 (392)
                      .||++.++++.
T Consensus       295 ~R~~~~~~l~h  305 (381)
T cd05626         295 GRNGADDIKAH  305 (381)
T ss_pred             CCCCHHHHhcC
Confidence            89999999865

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po

>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.77  E-value=4.4e-19  Score=170.73  Aligned_cols=171  Identities=17%  Similarity=0.231  Sum_probs=138.6

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEE-
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLL-  263 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll-  263 (392)
                      |++.||..+.---...+|+++|.-++||+.+++.+..-...+....+++.||..|+.|+|+-   .++||||||+|+.+ 
T Consensus        76 HpNiVRLYEViDTQTKlyLiLELGD~GDl~DyImKHe~Gl~E~La~kYF~QI~~AI~YCHqL---HVVHRDLKPENVVFF  152 (864)
T KOG4717|consen   76 HPNIVRLYEVIDTQTKLYLILELGDGGDLFDYIMKHEEGLNEDLAKKYFAQIVHAISYCHQL---HVVHRDLKPENVVFF  152 (864)
T ss_pred             CcCeeeeeehhcccceEEEEEEecCCchHHHHHHhhhccccHHHHHHHHHHHHHHHHHHhhh---hhhcccCCcceeEEe
Confidence            89999998775445789999999999999998887777777777899999999999999998   69999999999876 


Q ss_pred             cCCCCCeEeeeeceEEeCCCCcceeceeeecccccCchhHHH-------HHHHhcCCCcceee-cccccCCCCCCHH---
Q 045577          264 DAEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELLQ-------AWKLWSEGDPMEII-DEQTKMKGPFSAD---  332 (392)
Q Consensus       264 ~~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~~-------~~diws~G~v~~~l-d~~~~~~~~~~~~---  332 (392)
                      .+-|.+|+.|||++-.+.+..  ..++.+|+..|-| ||++.       ++|+|++|.+++|+ .++++|....+.+   
T Consensus       153 EKlGlVKLTDFGFSNkf~PG~--kL~TsCGSLAYSA-PEILLGDsYDAPAVDiWSLGVILyMLVCGq~PFqeANDSETLT  229 (864)
T KOG4717|consen  153 EKLGLVKLTDFGFSNKFQPGK--KLTTSCGSLAYSA-PEILLGDSYDAPAVDIWSLGVILYMLVCGQPPFQEANDSETLT  229 (864)
T ss_pred             eecCceEeeeccccccCCCcc--hhhcccchhhccC-chhhhcCccCCcchhhhHHHHHHHHHHhCCCccccccchhhhh
Confidence            566889999999987664333  3345789999999 77763       78999999998654 4555554433333   


Q ss_pred             ------------HHHHHHHHHHhhcccCcCCCCCHHHHHHH
Q 045577          333 ------------ELVKCIEVGLLCVQQRIEDWPTMSSVLTM  361 (392)
Q Consensus       333 ------------~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~  361 (392)
                                  ...+|.+++..|++.||++|.+.++|+..
T Consensus       230 mImDCKYtvPshvS~eCrdLI~sMLvRdPkkRAslEeI~s~  270 (864)
T KOG4717|consen  230 MIMDCKYTVPSHVSKECRDLIQSMLVRDPKKRASLEEIVST  270 (864)
T ss_pred             hhhcccccCchhhhHHHHHHHHHHHhcCchhhccHHHHhcc
Confidence                        33467778999999999999999999864

>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4

Probab=99.77  E-value=7.9e-19  Score=164.21  Aligned_cols=175  Identities=15%  Similarity=0.143  Sum_probs=123.5

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhh--c------cccchhhhhHHHHHHHhhhhcCcCCCCceeeccc
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFE--C------SKYSSYVTNILYGIARVILYLPEDSRLEIIHRDH  256 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~--~------~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDl  256 (392)
                      |++.++.......++..+++|||++++++........  +      ......+..++.|++.||.|||+.   +++||||
T Consensus        67 h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~---~i~H~dl  143 (275)
T cd05046          67 HKNVVRLLGLCREAEPHYMILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSNA---RFVHRDL  143 (275)
T ss_pred             CcceeeeEEEECCCCcceEEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhhc---CcccCcC
Confidence            4444444444444466899999999999877544322  1      234555788999999999999998   8999999


Q ss_pred             ccceeEEcCCCCCeEeeeeceEEeCCCCcceeceeeecccccCchhHH------HHHHHhcCCCcc-eeec-ccccCCCC
Q 045577          257 KTSNVLLDAEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIID-EQTKMKGP  328 (392)
Q Consensus       257 Kp~NIll~~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld-~~~~~~~~  328 (392)
                      ||+||+++.++.+|++|||+++..............++..|++ ||..      ...|+|++|+++ +++. +...+...
T Consensus       144 kp~Nili~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~y~~-PE~~~~~~~~~~~Di~slG~~l~~l~~~~~~p~~~~  222 (275)
T cd05046         144 AARNCLVSSQREVKVSLLSLSKDVYNSEYYKLRNALIPLRWLA-PEAVQEDDFSTKSDVWSFGVLMWEVFTQGELPFYGL  222 (275)
T ss_pred             ccceEEEeCCCcEEEcccccccccCcccccccCCceeEEeecC-hhhhccCCCCchhhHHHHHHHHHHHHhCCCCCcccc
Confidence            9999999999999999999987543222222223456677888 6643      357999999876 3333 22122110


Q ss_pred             -----------------CCHHHHHHHHHHHHhhcccCcCCCCCHHHHHHHHc
Q 045577          329 -----------------FSADELVKCIEVGLLCVQQRIEDWPTMSSVLTMLS  363 (392)
Q Consensus       329 -----------------~~~~~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~L~  363 (392)
                                       ........+.+++.+|++.+|++||++.+++++|.
T Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~~l~~l~  274 (275)
T cd05046         223 SDEEVLNRLQAGKLELPVPEGCPSRLYKLMTRCWAVNPKDRPSFSELVSALG  274 (275)
T ss_pred             chHHHHHHHHcCCcCCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhc
Confidence                             01112245677888999999999999999999985

Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s

>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

Probab=99.77  E-value=1e-18  Score=163.94  Aligned_cols=163  Identities=23%  Similarity=0.296  Sum_probs=119.6

Q ss_pred             CCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEcCCCCCeEeeeece
Q 045577          198 DGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEINPNISDFGPA  277 (392)
Q Consensus       198 ~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~~~~~~kl~DFGla  277 (392)
                      .+..+++|||+.++++.....+......+..+..++.|++.||.|||+.   +++||||||+||+++.++.+||+|||++
T Consensus        80 ~~~~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~i~H~di~p~nil~~~~~~~kL~dfg~~  156 (279)
T cd05057          80 SSQVQLITQLMPLGCLLDYVRNHKDNIGSQYLLNWCVQIAKGMSYLEEK---RLVHRDLAARNVLVKTPQHVKITDFGLA  156 (279)
T ss_pred             cCceEEEEecCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhC---CEEecccCcceEEEcCCCeEEECCCccc
Confidence            3678999999999988775544322234555789999999999999997   8999999999999999999999999999


Q ss_pred             EEeCCCCcce-eceeeecccccCchhHH------HHHHHhcCCCcc-eeec-ccccCCCCCCHHH---------------
Q 045577          278 RIFGDQTEEV-TGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIID-EQTKMKGPFSADE---------------  333 (392)
Q Consensus       278 ~~~~~~~~~~-~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld-~~~~~~~~~~~~~---------------  333 (392)
                      +......... .....++..|++ ||..      ...|+|+.|+++ +++. +..++... ..++               
T Consensus       157 ~~~~~~~~~~~~~~~~~~~~y~~-PE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~-~~~~~~~~~~~~~~~~~~~  234 (279)
T cd05057         157 KLLDVDEKEYHAEGGKVPIKWMA-LESILHRIYTHKSDVWSYGVTVWELMTFGAKPYEGI-PAVEIPDLLEKGERLPQPP  234 (279)
T ss_pred             ccccCcccceecCCCcccccccC-HHHhhcCCcCchhhHHHHHHHHHHHhcCCCCCCCCC-CHHHHHHHHhCCCCCCCCC
Confidence            8764221111 111223457888 6654      368999999876 4554 43333222 2211               


Q ss_pred             --HHHHHHHHHhhcccCcCCCCCHHHHHHHHccC
Q 045577          334 --LVKCIEVGLLCVQQRIEDWPTMSSVLTMLSNE  365 (392)
Q Consensus       334 --~~~~~~i~~~Cl~~dp~~RPsm~eVv~~L~~~  365 (392)
                        ...+.+++..|+..+|++||++.++++.|+..
T Consensus       235 ~~~~~~~~~~~~~l~~~p~~Rp~~~~l~~~l~~~  268 (279)
T cd05057         235 ICTIDVYMVLVKCWMIDAESRPTFKELINEFSKM  268 (279)
T ss_pred             CCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHH
Confidence              12455678899999999999999999999875

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea

>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=99.77  E-value=5.4e-19  Score=173.56  Aligned_cols=171  Identities=19%  Similarity=0.186  Sum_probs=118.0

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEc
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLD  264 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~  264 (392)
                      |+++++.......++..|++|||++++++......... ..+..+..++.|++.||.|||+.   +|+||||||+||+++
T Consensus        60 hp~iv~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~-~~~~~~~~~~~ql~~aL~~LH~~---givHrDlkp~NIll~  135 (377)
T cd05629          60 SPWVVSLYYSFQDAQYLYLIMEFLPGGDLMTMLIKYDT-FSEDVTRFYMAECVLAIEAVHKL---GFIHRDIKPDNILID  135 (377)
T ss_pred             CCCcceEEEEEEcCCeeEEEEeCCCCCcHHHHHHhcCC-CCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHEEEC
Confidence            44555544443445679999999999998775544332 23444677899999999999998   899999999999999


Q ss_pred             CCCCCeEeeeeceEEeCCCCc------------c----------------------------------eeceeeeccccc
Q 045577          265 AEINPNISDFGPARIFGDQTE------------E----------------------------------VTGRVIGTQTLK  298 (392)
Q Consensus       265 ~~~~~kl~DFGla~~~~~~~~------------~----------------------------------~~~~~~gt~~y~  298 (392)
                      .++.+||+|||+++.+.....            .                                  ......||+.|+
T Consensus       136 ~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~  215 (377)
T cd05629         136 RGGHIKLSDFGLSTGFHKQHDSAYYQKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYI  215 (377)
T ss_pred             CCCCEEEeecccccccccccccccccccccccccccccccccccccccccccccchhhhhhhhhcccccccccCCCcccc
Confidence            999999999999863321000            0                                  001246899999


Q ss_pred             CchhHH------HHHHHhcCCCcc-eeecccccCCCCCCHHHH-------------------HHHHHHHHhhcccCcCCC
Q 045577          299 TVPELL------QAWKLWSEGDPM-EIIDEQTKMKGPFSADEL-------------------VKCIEVGLLCVQQRIEDW  352 (392)
Q Consensus       299 a~~~~~------~~~diws~G~v~-~~ld~~~~~~~~~~~~~~-------------------~~~~~i~~~Cl~~dp~~R  352 (392)
                      | ||+.      .+.|+|+.|+++ +++.+.+++......+..                   ..+.+++..|++ +|.+|
T Consensus       216 a-PE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dli~~lL~-~~~~r  293 (377)
T cd05629         216 A-PEIFLQQGYGQECDWWSLGAIMFECLIGWPPFCSENSHETYRKIINWRETLYFPDDIHLSVEAEDLIRRLIT-NAENR  293 (377)
T ss_pred             C-HHHHccCCCCCceeeEecchhhhhhhcCCCCCCCCCHHHHHHHHHccCCccCCCCCCCCCHHHHHHHHHHhc-CHhhc
Confidence            9 7765      367999999987 666665444332222111                   234456667887 66654


Q ss_pred             ---CCHHHHHHH
Q 045577          353 ---PTMSSVLTM  361 (392)
Q Consensus       353 ---Psm~eVv~~  361 (392)
                         +++.++++.
T Consensus       294 ~~r~~~~~~l~h  305 (377)
T cd05629         294 LGRGGAHEIKSH  305 (377)
T ss_pred             CCCCCHHHHhcC
Confidence               688888765

Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of

>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

Probab=99.77  E-value=5.1e-19  Score=163.62  Aligned_cols=173  Identities=21%  Similarity=0.243  Sum_probs=125.7

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhh-hccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEE
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEF-ECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLL  263 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~-~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll  263 (392)
                      |++.++.....++.+..+++|||++++++.....+. ........+..++.|++.||.|||+.   +++|+||||+||++
T Consensus        58 h~~i~~~~~~~~~~~~~~~~~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~dl~p~ni~~  134 (256)
T cd08221          58 HPNIIAYYNHFMDDNTLLIEMEYANGGTLYDKIVRQKGQLFEEEMVLWYLFQIVSAVSYIHKA---GILHRDIKTLNIFL  134 (256)
T ss_pred             CCCeeEEEeEEecCCeEEEEEEecCCCcHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhC---CccccCCChHhEEE
Confidence            444444444445566789999999999998766554 22335556788999999999999998   89999999999999


Q ss_pred             cCCCCCeEeeeeceEEeCCCCcceeceeeecccccCchhHH------HHHHHhcCCCcc-eeecccccCCCCCCHH----
Q 045577          264 DAEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIIDEQTKMKGPFSAD----  332 (392)
Q Consensus       264 ~~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld~~~~~~~~~~~~----  332 (392)
                      +.++.+||+|||+++....... ......+++.|++ ||..      ...|+|+.|+++ +++.+...+......+    
T Consensus       135 ~~~~~~kl~d~~~~~~~~~~~~-~~~~~~~~~~y~a-pe~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~~~~~  212 (256)
T cd08221         135 TKAGLIKLGDFGISKILGSEYS-MAETVVGTPYYMS-PELCQGVKYNFKSDIWALGCVLYELLTLKRTFDATNPLNLVVK  212 (256)
T ss_pred             eCCCCEEECcCcceEEcccccc-cccccCCCccccC-HhhcCCCCCCCcchhHHHHHHHHHHHHCCCCCCCCCHHHHHHH
Confidence            9999999999999987653222 2233567888988 6653      357999999876 4444332222211111    


Q ss_pred             ------------HHHHHHHHHHhhcccCcCCCCCHHHHHHHH
Q 045577          333 ------------ELVKCIEVGLLCVQQRIEDWPTMSSVLTML  362 (392)
Q Consensus       333 ------------~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~L  362 (392)
                                  ....+.+++..|++.+|++||++.++++.+
T Consensus       213 ~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~s~~~ll~~~  254 (256)
T cd08221         213 IVQGNYTPVVSVYSSELISLVHSLLQQDPEKRPTADEVLDQP  254 (256)
T ss_pred             HHcCCCCCCccccCHHHHHHHHHHcccCcccCCCHHHHhhCc
Confidence                        124567788899999999999999998753

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa

>PTZ00036 glycogen synthase kinase; Provisional

Probab=99.77  E-value=4.1e-19  Score=177.93  Aligned_cols=155  Identities=21%  Similarity=0.220  Sum_probs=111.0

Q ss_pred             eeEEecCccCCCcChhhh--hhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEcCCC-CCeEeeeece
Q 045577          201 VFLMFEGIKLPDKSEFTC--EFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEI-NPNISDFGPA  277 (392)
Q Consensus       201 ~~lv~e~~~~~~l~~~~~--~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~~~~-~~kl~DFGla  277 (392)
                      .+++|||++++.......  ..........+..++.|++.||.|||+.   +|+||||||+||+++.++ .+||+|||++
T Consensus       142 l~lvmE~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH~~---~IiHrDLKp~NILl~~~~~~vkL~DFGla  218 (440)
T PTZ00036        142 LNVVMEFIPQTVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIHSK---FICHRDLKPQNLLIDPNTHTLKLCDFGSA  218 (440)
T ss_pred             EEEEEecCCccHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCcCHHHEEEcCCCCceeeeccccc
Confidence            568999998643222111  1122234555788899999999999998   899999999999998664 6999999999


Q ss_pred             EEeCCCCcceeceeeecccccCchhHH-------HHHHHhcCCCcc-eeecccccCCCCCCHHH----------------
Q 045577          278 RIFGDQTEEVTGRVIGTQTLKTVPELL-------QAWKLWSEGDPM-EIIDEQTKMKGPFSADE----------------  333 (392)
Q Consensus       278 ~~~~~~~~~~~~~~~gt~~y~a~~~~~-------~~~diws~G~v~-~~ld~~~~~~~~~~~~~----------------  333 (392)
                      +.+....  ......||+.|+| ||+.       .+.|+|+.|+++ +++.+.+.+.+....+.                
T Consensus       219 ~~~~~~~--~~~~~~~t~~y~a-PE~~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~~~p~~~~~  295 (440)
T PTZ00036        219 KNLLAGQ--RSVSYICSRFYRA-PELMLGATNYTTHIDLWSLGCIIAEMILGYPIFSGQSSVDQLVRIIQVLGTPTEDQL  295 (440)
T ss_pred             hhccCCC--CcccCCCCcCccC-HHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHH
Confidence            8654222  1223567899999 7754       257999999877 56666555443321111                


Q ss_pred             ----------------------------HHHHHHHHHhhcccCcCCCCCHHHHHHH
Q 045577          334 ----------------------------LVKCIEVGLLCVQQRIEDWPTMSSVLTM  361 (392)
Q Consensus       334 ----------------------------~~~~~~i~~~Cl~~dp~~RPsm~eVv~~  361 (392)
                                                  ...+.+++..|++.+|.+|||+.++++.
T Consensus       296 ~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~li~~~L~~dP~~R~ta~e~l~h  351 (440)
T PTZ00036        296 KEMNPNYADIKFPDVKPKDLKKVFPKGTPDDAINFISQFLKYEPLKRLNPIEALAD  351 (440)
T ss_pred             HHhchhhhcccCCccCchhHHHHhccCCCHHHHHHHHHHCCCChhHCcCHHHHhCC
Confidence                                        1246678889999999999999998844

>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases

Probab=99.77  E-value=8.3e-19  Score=161.71  Aligned_cols=163  Identities=20%  Similarity=0.191  Sum_probs=116.6

Q ss_pred             CCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEcCCCCCeEeeeece
Q 045577          198 DGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEINPNISDFGPA  277 (392)
Q Consensus       198 ~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~~~~~~kl~DFGla  277 (392)
                      .+..+++|||+.++++.....+.........+..++.+++.||.|||++   +++||||||+||+++.++.+||+|||++
T Consensus        64 ~~~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~l~~lH~~---~i~h~di~p~nili~~~~~~~l~d~g~~  140 (251)
T cd05041          64 KQPIYIVMELVPGGSLLTFLRKKKNRLTVKKLLQMSLDAAAGMEYLESK---NCIHRDLAARNCLVGENNVLKISDFGMS  140 (251)
T ss_pred             CCCeEEEEEcCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CEehhhcCcceEEEcCCCcEEEeecccc
Confidence            4678999999999888765443333334555788899999999999998   8999999999999999999999999998


Q ss_pred             EEeCCCCcc-eeceeeecccccCchhHH------HHHHHhcCCCcc-eeec-ccccCCCC----------------CCHH
Q 045577          278 RIFGDQTEE-VTGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIID-EQTKMKGP----------------FSAD  332 (392)
Q Consensus       278 ~~~~~~~~~-~~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld-~~~~~~~~----------------~~~~  332 (392)
                      +........ ......++..|++ ||..      ...|+|+.|+++ +++. +...+...                .+..
T Consensus       141 ~~~~~~~~~~~~~~~~~~~~y~~-PE~~~~~~~~~~~Di~slG~i~~~l~t~~~~p~~~~~~~~~~~~~~~~~~~~~~~~  219 (251)
T cd05041         141 REEEGGIYTVSDGLKQIPIKWTA-PEALNYGRYTSESDVWSYGILLWETFSLGDTPYPGMSNQQTRERIESGYRMPAPQL  219 (251)
T ss_pred             ccccCCcceeccccCcceeccCC-hHhhccCCCCcchhHHHHHHHHHHHHhccCCCCccCCHHHHHHHHhcCCCCCCCcc
Confidence            765321111 1111223556888 6654      367999999876 4443 22222111                1112


Q ss_pred             HHHHHHHHHHhhcccCcCCCCCHHHHHHHHcc
Q 045577          333 ELVKCIEVGLLCVQQRIEDWPTMSSVLTMLSN  364 (392)
Q Consensus       333 ~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~L~~  364 (392)
                      ....+.+++.+|++.+|++||++.+|++.|++
T Consensus       220 ~~~~~~~li~~~l~~~p~~Rp~~~ell~~l~~  251 (251)
T cd05041         220 CPEEIYRLMLQCWAYDPENRPSFSEIYNELQI  251 (251)
T ss_pred             CCHHHHHHHHHHhccChhhCcCHHHHHHHhhC
Confidence            22466778889999999999999999999863

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k

>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8

Probab=99.77  E-value=4.2e-19  Score=169.82  Aligned_cols=135  Identities=25%  Similarity=0.325  Sum_probs=91.7

Q ss_pred             CCCccccccCcCC--CCCeeEEecCccCCCcChhhhhhh--------ccccchhhhhHHHHHHHhhhhcCcCCCCceeec
Q 045577          185 SGGCKRNWEADCG--DGEVFLMFEGIKLPDKSEFTCEFE--------CSKYSSYVTNILYGIARVILYLPEDSRLEIIHR  254 (392)
Q Consensus       185 s~GCvR~~~l~C~--~~~~~lv~e~~~~~~l~~~~~~~~--------~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHr  254 (392)
                      |++.++.......  +...|++|||+.+ ++........        .......+..++.|++.||.|||+.   +|+||
T Consensus        57 h~niv~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~---~ivHr  132 (317)
T cd07868          57 HPNVISLQKVFLSHADRKVWLLFDYAEH-DLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHAN---WVLHR  132 (317)
T ss_pred             CCCCcceeeeEecCCCcEEEEEEeccCC-CHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHhC---CEEcC
Confidence            4454444433221  3457899999875 4333211110        1123444788999999999999998   89999


Q ss_pred             ccccceeEE----cCCCCCeEeeeeceEEeCCCC--cceeceeeecccccCchhHH-------HHHHHhcCCCcc-eeec
Q 045577          255 DHKTSNVLL----DAEINPNISDFGPARIFGDQT--EEVTGRVIGTQTLKTVPELL-------QAWKLWSEGDPM-EIID  320 (392)
Q Consensus       255 DlKp~NIll----~~~~~~kl~DFGla~~~~~~~--~~~~~~~~gt~~y~a~~~~~-------~~~diws~G~v~-~~ld  320 (392)
                      ||||+|||+    +.++.+||+|||+++......  ........||+.|+| ||+.       .+.|+|+.|+++ +++.
T Consensus       133 Dlkp~Nil~~~~~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~t~~y~a-PE~~~~~~~~~~~~DiwslG~il~el~~  211 (317)
T cd07868         133 DLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRA-PELLLGARHYTKAIDIWAIGCIFAELLT  211 (317)
T ss_pred             CCCHHHEEEecCCCCcCcEEEeecCceeccCCCCccccccCCccccccccC-CHHHcCCCCcCchhhHHHHHHHHHHHHh
Confidence            999999999    456789999999998765221  122234678999999 6654       257999999876 4555


Q ss_pred             cccc
Q 045577          321 EQTK  324 (392)
Q Consensus       321 ~~~~  324 (392)
                      +.+.
T Consensus       212 g~~~  215 (317)
T cd07868         212 SEPI  215 (317)
T ss_pred             CCCC
Confidence            5433

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p

>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7

Probab=99.77  E-value=5.4e-19  Score=166.02  Aligned_cols=159  Identities=21%  Similarity=0.180  Sum_probs=116.5

Q ss_pred             CCCCeeEEecCccCCCcChhhhhhhc-cccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEcCCCCCeEeeee
Q 045577          197 GDGEVFLMFEGIKLPDKSEFTCEFEC-SKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEINPNISDFG  275 (392)
Q Consensus       197 ~~~~~~lv~e~~~~~~l~~~~~~~~~-~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~~~~~~kl~DFG  275 (392)
                      .+...|++|||++++++......... ......+..++.|++.||.|||+.   +++||||||+||+++.++.+||+|||
T Consensus        64 ~~~~~~lv~e~~~g~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dikp~Nili~~~~~~~l~Dfg  140 (277)
T cd05607          64 SKTHLCLVMSLMNGGDLKYHIYNVGERGLEMERVIHYSAQITCGILHLHSM---DIVYRDMKPENVLLDDQGNCRLSDLG  140 (277)
T ss_pred             cCCeEEEEEecCCCCCHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHC---CEEEccCChHhEEEcCCCCEEEeece
Confidence            35678999999999998765433221 234444678899999999999998   89999999999999999999999999


Q ss_pred             ceEEeCCCCcceeceeeecccccCchhHH------HHHHHhcCCCcc-eeecccccCCCCCC---HH-------------
Q 045577          276 PARIFGDQTEEVTGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIIDEQTKMKGPFS---AD-------------  332 (392)
Q Consensus       276 la~~~~~~~~~~~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld~~~~~~~~~~---~~-------------  332 (392)
                      ++.......  ......|+..|+| ||..      ...|+|+.|+++ +++.+..++.....   .+             
T Consensus       141 ~~~~~~~~~--~~~~~~~~~~y~a-PE~~~~~~~~~~~DvwslGv~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~  217 (277)
T cd05607         141 LAVELKDGK--TITQRAGTNGYMA-PEILKEEPYSYPVDWFAMGCSIYEMVAGRTPFKDHKEKVAKEELKRRTLEDEVKF  217 (277)
T ss_pred             eeeecCCCc--eeeccCCCCCccC-HHHHccCCCCCchhHHHHHHHHHHHHhCCCCCCCCcchhhHHHHHHHhhcccccc
Confidence            998764322  2223468899999 7764      367999999876 55555433322110   01             


Q ss_pred             ----HHHHHHHHHHhhcccCcCCCCCHHHHHHH
Q 045577          333 ----ELVKCIEVGLLCVQQRIEDWPTMSSVLTM  361 (392)
Q Consensus       333 ----~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~  361 (392)
                          ....+.+++..|++.+|++||++.|+++.
T Consensus       218 ~~~~~~~~~~~li~~~L~~~P~~R~~~~~~~~~  250 (277)
T cd05607         218 EHQNFTEESKDICRLFLAKKPEDRLGSREKNDD  250 (277)
T ss_pred             ccccCCHHHHHHHHHHhccCHhhCCCCccchhh
Confidence                12245678889999999999999776644

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr

>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase)

Probab=99.77  E-value=7.4e-19  Score=164.94  Aligned_cols=164  Identities=18%  Similarity=0.196  Sum_probs=119.7

Q ss_pred             CCCeeEEecCccCCCcChhhhhhhc-------cccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEcCCCCCe
Q 045577          198 DGEVFLMFEGIKLPDKSEFTCEFEC-------SKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEINPN  270 (392)
Q Consensus       198 ~~~~~lv~e~~~~~~l~~~~~~~~~-------~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~~~~~~k  270 (392)
                      +...++++||+.++++.........       ......+..++.|++.||.|||+.   +++||||||+||+++.++.+|
T Consensus        81 ~~~~~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~---~i~H~di~p~nil~~~~~~~k  157 (280)
T cd05043          81 GEPPFVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHKR---GVIHKDIAARNCVIDEELQVK  157 (280)
T ss_pred             CCCCEEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccCHhhEEEcCCCcEE
Confidence            3567999999998888775443221       224555788999999999999998   899999999999999999999


Q ss_pred             EeeeeceEEeCCCCc-ceeceeeecccccCchhHH------HHHHHhcCCCcc-eeec-ccccCCCC-------------
Q 045577          271 ISDFGPARIFGDQTE-EVTGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIID-EQTKMKGP-------------  328 (392)
Q Consensus       271 l~DFGla~~~~~~~~-~~~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld-~~~~~~~~-------------  328 (392)
                      |+|||+++.+..... .......++..|+| ||..      ...|+|+.|+++ +++. +..++...             
T Consensus       158 l~d~g~~~~~~~~~~~~~~~~~~~~~~y~a-pE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~  236 (280)
T cd05043         158 ITDNALSRDLFPMDYHCLGDNENRPVKWMA-LESLVNKEYSSASDVWSFGVLLWELMTLGQTPYVEIDPFEMAAYLKDGY  236 (280)
T ss_pred             ECCCCCcccccCCceEEeCCCCCcchhccC-HHHHhcCCCCchhhHHHhHHHHHHHhcCCCCCcCcCCHHHHHHHHHcCC
Confidence            999999986542211 11122345667898 6654      368999999876 4443 32222111             


Q ss_pred             ---CCHHHHHHHHHHHHhhcccCcCCCCCHHHHHHHHccC
Q 045577          329 ---FSADELVKCIEVGLLCVQQRIEDWPTMSSVLTMLSNE  365 (392)
Q Consensus       329 ---~~~~~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~L~~~  365 (392)
                         ........+.+++.+|++.+|++||++.+|++.|+..
T Consensus       237 ~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~~~  276 (280)
T cd05043         237 RLAQPINCPDELFAVMACCWALDPEERPSFSQLVQCLTDF  276 (280)
T ss_pred             CCCCCCcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHH
Confidence               1111123577888899999999999999999999875

Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It

>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1

Probab=99.77  E-value=6.9e-19  Score=171.94  Aligned_cols=153  Identities=22%  Similarity=0.275  Sum_probs=111.2

Q ss_pred             CCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEcCCCCCeEeeeeceE
Q 045577          199 GEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEINPNISDFGPAR  278 (392)
Q Consensus       199 ~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~~~~~~kl~DFGla~  278 (392)
                      ...|+||||++++.. .....   ......+..++.|++.||.|||++   +|+||||||+||+++.++.+||+|||+++
T Consensus       102 ~~~~lv~e~~~~~l~-~~~~~---~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~DfG~a~  174 (364)
T cd07875         102 QDVYIVMELMDANLC-QVIQM---ELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLAR  174 (364)
T ss_pred             CeEEEEEeCCCCCHH-HHHHh---cCCHHHHHHHHHHHHHHHHHHhhC---CeecCCCCHHHEEECCCCcEEEEeCCCcc
Confidence            457999999986433 22211   123344678899999999999998   89999999999999999999999999998


Q ss_pred             EeCCCCcceeceeeecccccCchhHH------HHHHHhcCCCcc-eeecccccCCCCCCHH-------------------
Q 045577          279 IFGDQTEEVTGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIIDEQTKMKGPFSAD-------------------  332 (392)
Q Consensus       279 ~~~~~~~~~~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld~~~~~~~~~~~~-------------------  332 (392)
                      .....  .......||..|+| ||+.      .+.|+|+.|+++ +++.++..+.+....+                   
T Consensus       175 ~~~~~--~~~~~~~~t~~y~a-PE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~  251 (364)
T cd07875         175 TAGTS--FMMTPYVVTRYYRA-PEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKK  251 (364)
T ss_pred             ccCCC--CcccCCcccCCcCC-HHHHhCCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHh
Confidence            65421  12233568999999 7765      368999999876 4554433332111000                   


Q ss_pred             --------------------------------------HHHHHHHHHHhhcccCcCCCCCHHHHHHH
Q 045577          333 --------------------------------------ELVKCIEVGLLCVQQRIEDWPTMSSVLTM  361 (392)
Q Consensus       333 --------------------------------------~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~  361 (392)
                                                            ....+.+++.+|++.||++|||+.++++.
T Consensus       252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~t~~e~L~h  318 (364)
T cd07875         252 LQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQH  318 (364)
T ss_pred             hhHHHHHHHhhCCCcCCCChHhhCccccccccccccccccHHHHHHHHHhcCcCcccCCCHHHHhcC
Confidence                                                  01245678889999999999999999875

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2

Probab=99.77  E-value=8.5e-19  Score=170.00  Aligned_cols=134  Identities=23%  Similarity=0.291  Sum_probs=97.7

Q ss_pred             hhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEcCCCCCeEeeeeceEEeCCCCc-ceeceeeecccccCchhHH--
Q 045577          228 YVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEINPNISDFGPARIFGDQTE-EVTGRVIGTQTLKTVPELL--  304 (392)
Q Consensus       228 ~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~~-~~~~~~~gt~~y~a~~~~~--  304 (392)
                      .+.+++.|++.||.|||+.   +++||||||+||+++.++.+||+|||+++....... .......++..|++ ||..  
T Consensus       180 ~~~~~~~qi~~al~~lH~~---~i~H~dikp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~a-PE~~~~  255 (343)
T cd05103         180 DLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMA-PETIFD  255 (343)
T ss_pred             HHHHHHHHHHHHHHHHHhC---CeecCCCccCeEEEcCCCcEEEEecccccccccCcchhhcCCCCCCcceEC-cHHhcC
Confidence            3577899999999999998   899999999999999999999999999876532111 11122345667998 6643  


Q ss_pred             ----HHHHHhcCCCcc-eeec-ccccCCCCCCHH-----------------HHHHHHHHHHhhcccCcCCCCCHHHHHHH
Q 045577          305 ----QAWKLWSEGDPM-EIID-EQTKMKGPFSAD-----------------ELVKCIEVGLLCVQQRIEDWPTMSSVLTM  361 (392)
Q Consensus       305 ----~~~diws~G~v~-~~ld-~~~~~~~~~~~~-----------------~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~  361 (392)
                          ...|+|++|+++ +++. +..+........                 ....+.+++..|++.+|++||++.+|++.
T Consensus       256 ~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~cl~~~p~~Rps~~eil~~  335 (343)
T cd05103         256 RVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH  335 (343)
T ss_pred             CCCCchhhHHHHHHHHHHHHHCCCCCCCCccccHHHHHHHhccCCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence                367999999876 3442 322221111000                 11256788889999999999999999999


Q ss_pred             HccC
Q 045577          362 LSNE  365 (392)
Q Consensus       362 L~~~  365 (392)
                      |+..
T Consensus       336 l~~~  339 (343)
T cd05103         336 LGNL  339 (343)
T ss_pred             HHHH
Confidence            9865

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp

>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=99.77  E-value=4.6e-19  Score=173.09  Aligned_cols=170  Identities=16%  Similarity=0.146  Sum_probs=118.4

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEc
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLD  264 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~  264 (392)
                      |++.++.......++..|++|||++++++......... ..+..+..++.|++.||.|||+.   +|+||||||+|||++
T Consensus        60 h~~iv~~~~~~~~~~~~~lv~E~~~~g~L~~~l~~~~~-l~~~~~~~~~~qi~~aL~~lH~~---~ivH~Dlkp~NIl~~  135 (364)
T cd05599          60 NPWVVKLYYSFQDENYLYLIMEYLPGGDMMTLLMKKDT-FTEEETRFYIAETILAIDSIHKL---GYIHRDIKPDNLLLD  135 (364)
T ss_pred             CCCCcceEEEEEcCCeEEEEECCCCCcHHHHHHHHcCC-CCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeEEC
Confidence            33333333333445678999999999998776544332 34555788999999999999998   899999999999999


Q ss_pred             CCCCCeEeeeeceEEeCCCCcc-------------------------------------eeceeeecccccCchhHH---
Q 045577          265 AEINPNISDFGPARIFGDQTEE-------------------------------------VTGRVIGTQTLKTVPELL---  304 (392)
Q Consensus       265 ~~~~~kl~DFGla~~~~~~~~~-------------------------------------~~~~~~gt~~y~a~~~~~---  304 (392)
                      .++.+||+|||+++.+......                                     ......||+.|+| ||+.   
T Consensus       136 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~a-PE~~~~~  214 (364)
T cd05599         136 AKGHIKLSDFGLCTGLKKSHRTEFYRILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIA-PEVFLQT  214 (364)
T ss_pred             CCCCEEEeecccceeccccccccccccccccccccccccccccccccccccchhhcccccccccccCccccC-HHHHcCC
Confidence            9999999999998765311000                                     0012468999999 7765   


Q ss_pred             ---HHHHHhcCCCcc-eeecccccCCCCCCHHH-------------------HHHHHHHHHhhcccCcCCCCC---HHHH
Q 045577          305 ---QAWKLWSEGDPM-EIIDEQTKMKGPFSADE-------------------LVKCIEVGLLCVQQRIEDWPT---MSSV  358 (392)
Q Consensus       305 ---~~~diws~G~v~-~~ld~~~~~~~~~~~~~-------------------~~~~~~i~~~Cl~~dp~~RPs---m~eV  358 (392)
                         .+.|+|+.|+++ +++.+.+++......+.                   ...+.+++..|+. +|.+|++   +.++
T Consensus       215 ~~~~~~DiwSlG~il~el~~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~ll~-~p~~R~~~~~~~~l  293 (364)
T cd05599         215 GYNKECDWWSLGVIMYEMLVGYPPFCSDNPQETYRKIINWKETLQFPDEVPLSPEAKDLIKRLCC-EAERRLGNNGVNEI  293 (364)
T ss_pred             CCCCeeeeecchhHHHHhhcCCCCCCCCCHHHHHHHHHcCCCccCCCCCCCCCHHHHHHHHHHcc-CHhhcCCCCCHHHH
Confidence               357999999987 55555444332211111                   1234456667775 8999997   8887


Q ss_pred             HH
Q 045577          359 LT  360 (392)
Q Consensus       359 v~  360 (392)
                      ++
T Consensus       294 l~  295 (364)
T cd05599         294 KS  295 (364)
T ss_pred             hc
Confidence            66

Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica

>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=99.77  E-value=1.5e-19  Score=189.77  Aligned_cols=172  Identities=19%  Similarity=0.201  Sum_probs=126.1

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEc
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLD  264 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~  264 (392)
                      |++-||.....-.....++-||||++|.+........ ...+....-+..|++.|+.|||++   +|+||||||+||+|+
T Consensus      1293 HpNlV~YyGVEvHRekv~IFMEyC~~GsLa~ll~~gr-i~dE~vt~vyt~qll~gla~LH~~---gIVHRDIK~aNI~Ld 1368 (1509)
T KOG4645|consen 1293 HPNLVRYYGVEVHREKVYIFMEYCEGGSLASLLEHGR-IEDEMVTRVYTKQLLEGLAYLHEH---GIVHRDIKPANILLD 1368 (1509)
T ss_pred             CccccccCceeecHHHHHHHHHHhccCcHHHHHHhcc-hhhhhHHHHHHHHHHHHHHHHHhc---CceecCCCccceeee
Confidence            9999998877766678999999999999987432221 112222345678999999999998   899999999999999


Q ss_pred             CCCCCeEeeeeceEEeCCCC---cceeceeeecccccCchhHHH---------HHHHhcCCCcc-eeecccccCC-----
Q 045577          265 AEINPNISDFGPARIFGDQT---EEVTGRVIGTQTLKTVPELLQ---------AWKLWSEGDPM-EIIDEQTKMK-----  326 (392)
Q Consensus       265 ~~~~~kl~DFGla~~~~~~~---~~~~~~~~gt~~y~a~~~~~~---------~~diws~G~v~-~~ld~~~~~~-----  326 (392)
                      .+|.+|+.|||.|..+....   ........||+.||| ||+..         +.|+|+.||+. ||+.++.+..     
T Consensus      1369 ~~g~iK~~DFGsa~ki~~~~~~~~~el~~~~GT~~YMA-PEvit~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~~~dne 1447 (1509)
T KOG4645|consen 1369 FNGLIKYGDFGSAVKIKNNAQTMPGELQSMMGTPMYMA-PEVITGTKGKGHGGAADIWSLGCVVLEMATGKRPWAELDNE 1447 (1509)
T ss_pred             cCCcEEeecccceeEecCchhcCCHHHHhhcCCchhcC-chhhcccccCCCCcchhhhcccceEEEeecCCCchhhccch
Confidence            99999999999998875322   122234789999999 77663         67999999975 7777743321     


Q ss_pred             ------------CCCCHHHHHHHHHHHHhhcccCcCCCCCHHHHHHH
Q 045577          327 ------------GPFSADELVKCIEVGLLCVQQRIEDWPTMSSVLTM  361 (392)
Q Consensus       327 ------------~~~~~~~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~  361 (392)
                                  +..+......-.+.+-.|++.||++|-++.|+++.
T Consensus      1448 ~aIMy~V~~gh~Pq~P~~ls~~g~dFle~Cl~~dP~~Rw~~~qlle~ 1494 (1509)
T KOG4645|consen 1448 WAIMYHVAAGHKPQIPERLSSEGRDFLEHCLEQDPKMRWTASQLLEH 1494 (1509)
T ss_pred             hHHHhHHhccCCCCCchhhhHhHHHHHHHHHhcCchhhhHHHHHHHh
Confidence                        11222222223345569999999999877666543

>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

Probab=99.76  E-value=1.2e-18  Score=161.78  Aligned_cols=163  Identities=20%  Similarity=0.304  Sum_probs=119.9

Q ss_pred             CCCeeEEecCccCCCcChhhhhhh-ccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEcCCCCCeEeeeec
Q 045577          198 DGEVFLMFEGIKLPDKSEFTCEFE-CSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEINPNISDFGP  276 (392)
Q Consensus       198 ~~~~~lv~e~~~~~~l~~~~~~~~-~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~~~~~~kl~DFGl  276 (392)
                      .+..+++|||+.++++........ .......+..++.|++.||.|||+.   +++|+||||+||+++.++.++|+|||+
T Consensus        72 ~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~---~i~H~dl~p~ni~i~~~~~~~l~dfg~  148 (260)
T cd05067          72 QEPIYIITEYMENGSLVDFLKTPEGIKLTINKLIDMAAQIAEGMAFIERK---NYIHRDLRAANILVSETLCCKIADFGL  148 (260)
T ss_pred             cCCcEEEEEcCCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHhcC---CeecccccHHhEEEcCCCCEEEccCcc
Confidence            346899999999998876543322 2234555788999999999999998   899999999999999999999999999


Q ss_pred             eEEeCCCCcceeceeeecccccCchhHH------HHHHHhcCCCcc-eeec-ccccCCCCCCHH----------------
Q 045577          277 ARIFGDQTEEVTGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIID-EQTKMKGPFSAD----------------  332 (392)
Q Consensus       277 a~~~~~~~~~~~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld-~~~~~~~~~~~~----------------  332 (392)
                      +...............++..|++ ||..      ...|+|+.|+++ +++. +.+++.+....+                
T Consensus       149 ~~~~~~~~~~~~~~~~~~~~y~~-pe~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~  227 (260)
T cd05067         149 ARLIEDNEYTAREGAKFPIKWTA-PEAINYGTFTIKSDVWSFGILLTEIVTYGRIPYPGMTNPEVIQNLERGYRMPRPDN  227 (260)
T ss_pred             eeecCCCCcccccCCcccccccC-HHHhccCCcCcccchHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHcCCCCCCCCC
Confidence            98764222111122345677888 6654      367999999876 4554 433332221111                


Q ss_pred             HHHHHHHHHHhhcccCcCCCCCHHHHHHHHcc
Q 045577          333 ELVKCIEVGLLCVQQRIEDWPTMSSVLTMLSN  364 (392)
Q Consensus       333 ~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~L~~  364 (392)
                      ....+.+++.+|++.+|++||+++++++.|+.
T Consensus       228 ~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~  259 (260)
T cd05067         228 CPEELYELMRLCWKEKPEERPTFEYLRSVLED  259 (260)
T ss_pred             CCHHHHHHHHHHccCChhhCCCHHHHHHHhhc
Confidence            12357778889999999999999999999974

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr

>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=99.76  E-value=6e-19  Score=163.66  Aligned_cols=172  Identities=17%  Similarity=0.204  Sum_probs=122.0

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEc
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLD  264 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~  264 (392)
                      |++.++.......+...++++||++++++......... .....+..++.|++.||.|||+.   +++|+||||+||+++
T Consensus        63 ~~~i~~~~~~~~~~~~~~~v~e~~~~~~l~~~~~~~~~-~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dl~p~nilv~  138 (263)
T cd06625          63 HERIVQYYGCLRDDETLSIFMEYMPGGSVKDQLKAYGA-LTETVTRKYTRQILEGVEYLHSN---MIVHRDIKGANILRD  138 (263)
T ss_pred             CCCeeeeEEEEccCCeEEEEEEECCCCcHHHHHHHhCC-CCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEc
Confidence            44444444433445678999999999888765544322 23444688999999999999998   899999999999999


Q ss_pred             CCCCCeEeeeeceEEeCCCCccee--ceeeecccccCchhHH------HHHHHhcCCCcc-eeecccccCCCCC------
Q 045577          265 AEINPNISDFGPARIFGDQTEEVT--GRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIIDEQTKMKGPF------  329 (392)
Q Consensus       265 ~~~~~kl~DFGla~~~~~~~~~~~--~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld~~~~~~~~~------  329 (392)
                      .++.+||+|||+++..........  ....++..|+| ||..      ...|+|+.|+++ +++.++..+....      
T Consensus       139 ~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~a-PE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~  217 (263)
T cd06625         139 SAGNVKLGDFGASKRLQTICSSGTGMKSVTGTPYWMS-PEVISGEGYGRKADVWSVGCTVVEMLTEKPPWAEFEAMAAIF  217 (263)
T ss_pred             CCCCEEEeecccceeccccccccccccCCCcCccccC-cceeccCCCCchhhhHHHHHHHHHHHhCCCCccccchHHHHH
Confidence            999999999999986542211111  22457778988 6643      468999999876 4555433332211      


Q ss_pred             -----------CHHHHHHHHHHHHhhcccCcCCCCCHHHHHHH
Q 045577          330 -----------SADELVKCIEVGLLCVQQRIEDWPTMSSVLTM  361 (392)
Q Consensus       330 -----------~~~~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~  361 (392)
                                 +......+.+++..|++.+|++||++.++++.
T Consensus       218 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~  260 (263)
T cd06625         218 KIATQPTNPQLPSHVSPDARNFLRRTFVENAKKRPSAEELLRH  260 (263)
T ss_pred             HHhccCCCCCCCccCCHHHHHHHHHHhhcCcccCCCHHHHhhC
Confidence                       11122355678889999999999999999864

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t

>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional

Probab=99.76  E-value=6.7e-19  Score=192.89  Aligned_cols=170  Identities=14%  Similarity=0.219  Sum_probs=129.7

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEc
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLD  264 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~  264 (392)
                      |++.++........+..|+||||++++++.....+    ..+..+.+|+.|+|+||+|||..+..+|+|||+||+||+++
T Consensus       742 HpnIv~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~~----l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlkp~Nil~~  817 (968)
T PLN00113        742 HPNIVKLIGLCRSEKGAYLIHEYIEGKNLSEVLRN----LSWERRRKIAIGIAKALRFLHCRCSPAVVVGNLSPEKIIID  817 (968)
T ss_pred             CCCcceEEEEEEcCCCCEEEEeCCCCCcHHHHHhc----CCHHHHHHHHHHHHHHHHHhccCCCCCeecCCCCHHhEEEC
Confidence            78888777665556778999999999999776532    33445789999999999999977677999999999999999


Q ss_pred             CCCCCeEeeeeceEEeCCCCcceeceeeecccccCchhHH------HHHHHhcCCCcc-eeecccccCC-----------
Q 045577          265 AEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIIDEQTKMK-----------  326 (392)
Q Consensus       265 ~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld~~~~~~-----------  326 (392)
                      .++.+++. ||.......     .....+++.||| ||+.      .+.|+|+.|+++ |++.++.++.           
T Consensus       818 ~~~~~~~~-~~~~~~~~~-----~~~~~~t~~y~a-PE~~~~~~~~~~sDv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~  890 (968)
T PLN00113        818 GKDEPHLR-LSLPGLLCT-----DTKCFISSAYVA-PETRETKDITEKSDIYGFGLILIELLTGKSPADAEFGVHGSIVE  890 (968)
T ss_pred             CCCceEEE-ecccccccc-----CCCccccccccC-cccccCCCCCcccchhhHHHHHHHHHhCCCCCCcccCCCCcHHH
Confidence            99888875 665543221     112367899999 6644      468999999876 4444432211           


Q ss_pred             ----------------------CCCCHHHHHHHHHHHHhhcccCcCCCCCHHHHHHHHccC
Q 045577          327 ----------------------GPFSADELVKCIEVGLLCVQQRIEDWPTMSSVLTMLSNE  365 (392)
Q Consensus       327 ----------------------~~~~~~~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~L~~~  365 (392)
                                            ...+.++..++.+++.+|++.+|++||+|.+|+++|+..
T Consensus       891 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~evl~~L~~~  951 (968)
T PLN00113        891 WARYCYSDCHLDMWIDPSIRGDVSVNQNEIVEVMNLALHCTATDPTARPCANDVLKTLESA  951 (968)
T ss_pred             HHHHhcCccchhheeCccccCCCCccHHHHHHHHHHHHhhCcCCchhCcCHHHHHHHHHHh
Confidence                                  112345666788999999999999999999999999876

>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

Probab=99.76  E-value=6.7e-19  Score=165.41  Aligned_cols=172  Identities=20%  Similarity=0.251  Sum_probs=123.9

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEc
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLD  264 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~  264 (392)
                      |+++++.......+...++++||+ ++++...............+..++.|+++||.|||+.   +++|+||||+||+++
T Consensus        58 ~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~ni~~~  133 (286)
T cd07832          58 HPYVVKLLDVFPHGSGFVLVMEYM-PSDLSEVLRDEERPLPEAQVKSYMRMLLKGVAYMHAN---GIMHRDLKPANLLIS  133 (286)
T ss_pred             CCCCcceeeEEecCCeeEEEeccc-CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCcCHHHEEEc
Confidence            455555554444456789999999 8888765443333335555788999999999999998   899999999999999


Q ss_pred             CCCCCeEeeeeceEEeCCCCcceeceeeecccccCchhH-------HHHHHHhcCCCcc-eeecccccCCCCCC------
Q 045577          265 AEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPEL-------LQAWKLWSEGDPM-EIIDEQTKMKGPFS------  330 (392)
Q Consensus       265 ~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~-------~~~~diws~G~v~-~~ld~~~~~~~~~~------  330 (392)
                      .++.++|+|||++...............|+..|++ ||.       ..+.|+|+.|+++ +++.+.+.+.+..+      
T Consensus       134 ~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~a-PE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~  212 (286)
T cd07832         134 ADGVLKIADFGLARLFSEEEPRLYSHQVATRWYRA-PELLYGARKYDPGVDLWAVGCIFAELLNGSPLFPGENDIEQLAI  212 (286)
T ss_pred             CCCcEEEeeeeecccccCCCCCccccccCcccccC-ceeeeccccCCchhHHHHHHHHHHHHHcCCcCcCCCCHHHHHHH
Confidence            99999999999998765332222233567888999 554       2478999999876 44444322211110      


Q ss_pred             ---------------------------------------HHHHHHHHHHHHhhcccCcCCCCCHHHHHHH
Q 045577          331 ---------------------------------------ADELVKCIEVGLLCVQQRIEDWPTMSSVLTM  361 (392)
Q Consensus       331 ---------------------------------------~~~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~  361 (392)
                                                             .+....+.+++.+|++.+|++||+++++++.
T Consensus       213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~h  282 (286)
T cd07832         213 VFRTLGTPNEETWPGLTSLPDYNKITFPESKPIPLEEIFPDASPEALDLLKGLLVYDPSKRLSAAEALRH  282 (286)
T ss_pred             HHHHcCCCChHHHhhccCcchhhcccCCCCCcchHHHhCCCccHHHHHHHHHHhccChhhCCCHHHHhhC
Confidence                                                   0112456678889999999999999998763

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea

>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]

Probab=99.76  E-value=6.7e-19  Score=173.54  Aligned_cols=155  Identities=17%  Similarity=0.242  Sum_probs=117.9

Q ss_pred             CeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEcC-CCCCeEeeeeceE
Q 045577          200 EVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDA-EINPNISDFGPAR  278 (392)
Q Consensus       200 ~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~~-~~~~kl~DFGla~  278 (392)
                      ..-++.|.+..|+|..+..+..-.... .+.++++||++||.|||+ +.++|||||||-.||+++. .|.+||.|+|||.
T Consensus       117 ~in~iTEL~TSGtLr~Y~kk~~~vn~k-aik~W~RQILkGL~yLHs-~~PPIIHRDLKCDNIFinG~~G~VKIGDLGLAt  194 (632)
T KOG0584|consen  117 TINFITELFTSGTLREYRKKHRRVNIK-AIKSWCRQILKGLVYLHS-QDPPIIHRDLKCDNIFVNGNLGEVKIGDLGLAT  194 (632)
T ss_pred             eeeeeeecccCCcHHHHHHHhccCCHH-HHHHHHHHHHHHhhhhhc-CCCCccccccccceEEEcCCcCceeecchhHHH
Confidence            467899999999999877666554444 378999999999999999 4678999999999999975 5889999999998


Q ss_pred             EeCCCCcceeceeeecccccCchhHH-----HHHHHhcCC-CcceeecccccCCCCCCHHHHH-----------------
Q 045577          279 IFGDQTEEVTGRVIGTQTLKTVPELL-----QAWKLWSEG-DPMEIIDEQTKMKGPFSADELV-----------------  335 (392)
Q Consensus       279 ~~~~~~~~~~~~~~gt~~y~a~~~~~-----~~~diws~G-~v~~~ld~~~~~~~~~~~~~~~-----------------  335 (392)
                      .+...   ....+.|||.||| ||+.     ...|+|++| |++||+....+...-.++.++.                 
T Consensus       195 l~r~s---~aksvIGTPEFMA-PEmYEE~YnE~VDVYaFGMCmLEMvT~eYPYsEC~n~AQIYKKV~SGiKP~sl~kV~d  270 (632)
T KOG0584|consen  195 LLRKS---HAKSVIGTPEFMA-PEMYEENYNELVDVYAFGMCMLEMVTSEYPYSECTNPAQIYKKVTSGIKPAALSKVKD  270 (632)
T ss_pred             Hhhcc---ccceeccCccccC-hHHHhhhcchhhhhhhhhHHHHHHHhccCChhhhCCHHHHHHHHHcCCCHHHhhccCC
Confidence            76422   2233799999999 5543     478999999 4667777633332222222222                 


Q ss_pred             -HHHHHHHhhcccCcCCCCCHHHHHHH
Q 045577          336 -KCIEVGLLCVQQRIEDWPTMSSVLTM  361 (392)
Q Consensus       336 -~~~~i~~~Cl~~dp~~RPsm~eVv~~  361 (392)
                       .+.+++..|+.. .++|||+.|+++.
T Consensus       271 Pevr~fIekCl~~-~~~R~sa~eLL~d  296 (632)
T KOG0584|consen  271 PEVREFIEKCLAT-KSERLSAKELLKD  296 (632)
T ss_pred             HHHHHHHHHHhcC-chhccCHHHHhhC
Confidence             334577799999 9999999998864

>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5

Probab=99.76  E-value=9e-19  Score=164.61  Aligned_cols=170  Identities=17%  Similarity=0.224  Sum_probs=119.3

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEc
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLD  264 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~  264 (392)
                      |++.++.....+..+..++++||+++ ++...............+..++.||++||.|||+.   +++||||||+||+++
T Consensus        58 h~~i~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~---~i~H~dl~~~nil~~  133 (284)
T cd07839          58 HKNIVRLYDVLHSDKKLTLVFEYCDQ-DLKKYFDSCNGDIDPEIVKSFMFQLLKGLAFCHSH---NVLHRDLKPQNLLIN  133 (284)
T ss_pred             CCCeeeHHHHhccCCceEEEEecCCC-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEEc
Confidence            55555555555556789999999985 44333222222235555789999999999999998   899999999999999


Q ss_pred             CCCCCeEeeeeceEEeCCCCcceeceeeecccccCchhHH-------HHHHHhcCCCcc-eeecccccCCCCCCH-H---
Q 045577          265 AEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELL-------QAWKLWSEGDPM-EIIDEQTKMKGPFSA-D---  332 (392)
Q Consensus       265 ~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~-------~~~diws~G~v~-~~ld~~~~~~~~~~~-~---  332 (392)
                      .++.+||+|||+++........ .....++..|+| ||..       ...|+|+.|+++ +++.++.++....+. +   
T Consensus       134 ~~~~~~l~dfg~~~~~~~~~~~-~~~~~~~~~y~a-PE~~~~~~~~~~~~DiwslG~il~~l~tg~~p~~~~~~~~~~~~  211 (284)
T cd07839         134 KNGELKLADFGLARAFGIPVRC-YSAEVVTLWYRP-PDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLK  211 (284)
T ss_pred             CCCcEEECccchhhccCCCCCC-cCCCccccCCcC-hHHHhCCcccCcHHHHHHHHHHHHHHHhcCCCCcCCCCHHHHHH
Confidence            9999999999999865422111 122456788999 6653       357999999876 454443222111111 0   


Q ss_pred             -----------------------------------------HHHHHHHHHHhhcccCcCCCCCHHHHHH
Q 045577          333 -----------------------------------------ELVKCIEVGLLCVQQRIEDWPTMSSVLT  360 (392)
Q Consensus       333 -----------------------------------------~~~~~~~i~~~Cl~~dp~~RPsm~eVv~  360 (392)
                                                               ....+.+++..|++.||.+|||+.++++
T Consensus       212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~il~  280 (284)
T cd07839         212 RIFRLLGTPTEESWPGVSKLPDYKPYPMYPATTSLVNVVPKLNSTGRDLLQNLLVCNPVQRISAEEALQ  280 (284)
T ss_pred             HHHHHhCCCChHHhHHhhhcccccccCCCCCcchhhhhcccCCHHHHHHHHHHhcCChhhcCCHHHHhc
Confidence                                                     1124456888999999999999999875

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also

>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta

Probab=99.76  E-value=1.2e-18  Score=168.13  Aligned_cols=160  Identities=19%  Similarity=0.215  Sum_probs=114.0

Q ss_pred             CCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEcCCCCCeEeeeece
Q 045577          198 DGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEINPNISDFGPA  277 (392)
Q Consensus       198 ~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~~~~~~kl~DFGla  277 (392)
                      ++..|++|||++++++.....+......+..+..++.|++.||.|||+.   +|+||||||+||+++.++.+||+|||++
T Consensus        73 ~~~~~lv~Ey~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~~L~~lH~~---~iiHrDlkp~Nill~~~~~~kl~DfG~a  149 (331)
T cd05624          73 ENYLYLVMDYYVGGDLLTLLSKFEDRLPEDMARFYIAEMVLAIHSIHQL---HYVHRDIKPDNVLLDMNGHIRLADFGSC  149 (331)
T ss_pred             CCEEEEEEeCCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCchHHEEEcCCCCEEEEeccce
Confidence            4678999999999999876544322334455778899999999999998   8999999999999999999999999999


Q ss_pred             EEeCCCCcceeceeeecccccCchhHHH-----------HHHHhcCCCcc-eeecccccCCCCCCH--------------
Q 045577          278 RIFGDQTEEVTGRVIGTQTLKTVPELLQ-----------AWKLWSEGDPM-EIIDEQTKMKGPFSA--------------  331 (392)
Q Consensus       278 ~~~~~~~~~~~~~~~gt~~y~a~~~~~~-----------~~diws~G~v~-~~ld~~~~~~~~~~~--------------  331 (392)
                      +..............|++.|+| ||+..           ..|+|+.|+++ +++.+..++......              
T Consensus       150 ~~~~~~~~~~~~~~~gt~~y~a-PE~~~~~~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~~~~i~~~~~~~~  228 (331)
T cd05624         150 LKMNQDGTVQSSVAVGTPDYIS-PEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHEERFQ  228 (331)
T ss_pred             eeccCCCceeeccccCCcccCC-HHHHhccccCCCCCCCcccEEeeehhhhhhhhCCCCccCCCHHHHHHHHHcCCCccc
Confidence            8765333223334579999999 77543           46999999877 555554333221110              


Q ss_pred             ------HHHHHHHHHHHhhcccCcCC--CCCHHHHHHH
Q 045577          332 ------DELVKCIEVGLLCVQQRIED--WPTMSSVLTM  361 (392)
Q Consensus       332 ------~~~~~~~~i~~~Cl~~dp~~--RPsm~eVv~~  361 (392)
                            +....+.+++.+|+..++++  |++++++++.
T Consensus       229 ~p~~~~~~~~~~~~li~~ll~~~~~~~~~~~~~~~~~h  266 (331)
T cd05624         229 FPSHITDVSEEAKDLIQRLICSRERRLGQNGIEDFKKH  266 (331)
T ss_pred             CCCccccCCHHHHHHHHHHccCchhhcCCCCHHHHhcC
Confidence                  11234555666777654433  4677777654

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.

>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2

Probab=99.76  E-value=5.9e-19  Score=172.10  Aligned_cols=153  Identities=21%  Similarity=0.265  Sum_probs=110.8

Q ss_pred             CCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEcCCCCCeEeeeeceE
Q 045577          199 GEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEINPNISDFGPAR  278 (392)
Q Consensus       199 ~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~~~~~~kl~DFGla~  278 (392)
                      ...|++|||++++..... ..   ......+..++.|++.||.|||++   +|+||||||+||+++.++.+||+|||+++
T Consensus        99 ~~~~lv~e~~~~~l~~~~-~~---~~~~~~~~~~~~qi~~~L~~LH~~---~ivHrDlkp~NIl~~~~~~~kl~Dfg~a~  171 (359)
T cd07876          99 QDVYLVMELMDANLCQVI-HM---ELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLAR  171 (359)
T ss_pred             ceeEEEEeCCCcCHHHHH-hc---cCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEECCCCCEEEecCCCcc
Confidence            457999999986433221 11   123444677899999999999998   89999999999999999999999999997


Q ss_pred             EeCCCCcceeceeeecccccCchhHH------HHHHHhcCCCcc-eeecccccCCCCCCHH-------------------
Q 045577          279 IFGDQTEEVTGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIIDEQTKMKGPFSAD-------------------  332 (392)
Q Consensus       279 ~~~~~~~~~~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld~~~~~~~~~~~~-------------------  332 (392)
                      .....  .......||+.|+| ||..      .+.|+|+.|+++ +++.+...+.+....+                   
T Consensus       172 ~~~~~--~~~~~~~~t~~y~a-PE~~~~~~~~~~~DiwSlG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~  248 (359)
T cd07876         172 TACTN--FMMTPYVVTRYYRA-PEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLGTPSAEFMNR  248 (359)
T ss_pred             ccccC--ccCCCCcccCCCCC-chhccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCcHHHHHH
Confidence            64321  12233578899999 6654      367999999876 4555543332211100                   


Q ss_pred             --------------------------------------HHHHHHHHHHhhcccCcCCCCCHHHHHHH
Q 045577          333 --------------------------------------ELVKCIEVGLLCVQQRIEDWPTMSSVLTM  361 (392)
Q Consensus       333 --------------------------------------~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~  361 (392)
                                                            ....+.+++..|++.||++|||+.|+++.
T Consensus       249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~h  315 (359)
T cd07876         249 LQPTVRNYVENRPQYPGISFEELFPDWIFPSESERDKLKTSQARDLLSKMLVIDPDKRISVDEALRH  315 (359)
T ss_pred             HHHHHHHHHhhCCCCCCcchhhhccccccccccccccccchhHHHHHHHHhccCcccCCCHHHHhcC
Confidence                                                  01235678889999999999999999874

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

Probab=99.76  E-value=1.1e-18  Score=163.70  Aligned_cols=170  Identities=21%  Similarity=0.260  Sum_probs=124.6

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEc
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLD  264 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~  264 (392)
                      |++.++.......+...|++|||++++++.......  ...+..+..++.|++.||.|||+.   +++|+||+|+||+++
T Consensus        61 h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~i~~~l~~lH~~---~ivH~dl~p~ni~i~  135 (277)
T cd06642          61 SPYITRYYGSYLKGTKLWIIMEYLGGGSALDLLKPG--PLEETYIATILREILKGLDYLHSE---RKIHRDIKAANVLLS  135 (277)
T ss_pred             CCccHhhhcccccCCceEEEEEccCCCcHHHHhhcC--CCCHHHHHHHHHHHHHHHHHHhcC---CeeccCCChheEEEe
Confidence            566666655555567799999999999887654332  234455788999999999999998   899999999999999


Q ss_pred             CCCCCeEeeeeceEEeCCCCcceeceeeecccccCchhHH------HHHHHhcCCCcc-eeecccccCCCCC--------
Q 045577          265 AEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIIDEQTKMKGPF--------  329 (392)
Q Consensus       265 ~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld~~~~~~~~~--------  329 (392)
                      .++.+|++|||++..+.... .......++..|++ ||..      ...|+|+.|+++ +++.+..++....        
T Consensus       136 ~~~~~~l~dfg~~~~~~~~~-~~~~~~~~~~~y~a-PE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~  213 (277)
T cd06642         136 EQGDVKLADFGVAGQLTDTQ-IKRNTFVGTPFWMA-PEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPMRVLFLI  213 (277)
T ss_pred             CCCCEEEccccccccccCcc-hhhhcccCcccccC-HHHhCcCCCchhhhHHHHHHHHHHHHhCCCCCcccchhhHHhhh
Confidence            99999999999987654221 11122457788998 6654      368999999876 5555433221111        


Q ss_pred             --------CHHHHHHHHHHHHhhcccCcCCCCCHHHHHHH
Q 045577          330 --------SADELVKCIEVGLLCVQQRIEDWPTMSSVLTM  361 (392)
Q Consensus       330 --------~~~~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~  361 (392)
                              .......+.+++..|++.+|++||+|.+|++.
T Consensus       214 ~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~  253 (277)
T cd06642         214 PKNSPPTLEGQYSKPFKEFVEACLNKDPRFRPTAKELLKH  253 (277)
T ss_pred             hcCCCCCCCcccCHHHHHHHHHHccCCcccCcCHHHHHHh
Confidence                    11123356778889999999999999999974

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25

>PHA03210 serine/threonine kinase US3; Provisional

Probab=99.76  E-value=6.4e-19  Score=179.31  Aligned_cols=133  Identities=20%  Similarity=0.290  Sum_probs=97.0

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhh---hccccchhhhhHHHHHHHhhhhcCcCCCCceeeccccccee
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEF---ECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNV  261 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~---~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NI  261 (392)
                      |+++++........+..|+++|++....+....-..   ........+..|+.|++.||.|||+.   +|+||||||+||
T Consensus       222 HpnIv~l~~~~~~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~~---gIiHrDLKP~NI  298 (501)
T PHA03210        222 HENILKIEEILRSEANTYMITQKYDFDLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHDK---KLIHRDIKLENI  298 (501)
T ss_pred             CCCcCcEeEEEEECCeeEEEEeccccCHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHE
Confidence            788888776655566789999998654332211100   01112233567999999999999998   899999999999


Q ss_pred             EEcCCCCCeEeeeeceEEeCCCCcceeceeeecccccCchhHH------HHHHHhcCCCcc-eeecc
Q 045577          262 LLDAEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIIDE  321 (392)
Q Consensus       262 ll~~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld~  321 (392)
                      |++.++.+||+|||+++.+............||..|+| ||+.      ...|+|+.|+++ +++.+
T Consensus       299 Ll~~~~~vkL~DFGla~~~~~~~~~~~~~~~gt~~y~a-PE~~~~~~~~~~~DiwSlGvil~ell~~  364 (501)
T PHA03210        299 FLNCDGKIVLGDFGTAMPFEKEREAFDYGWVGTVATNS-PEILAGDGYCEITDIWSCGLILLDMLSH  364 (501)
T ss_pred             EECCCCCEEEEeCCCceecCcccccccccccCCcCCCC-chhhcCCCCCcHHHHHHHHHHHHHHHHC
Confidence            99999999999999998775333333334678999999 6665      468999999876 45543

>PTZ00284 protein kinase; Provisional

Probab=99.76  E-value=8.2e-19  Score=177.19  Aligned_cols=153  Identities=13%  Similarity=0.195  Sum_probs=109.6

Q ss_pred             CCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEcCCC-----------
Q 045577          199 GEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEI-----------  267 (392)
Q Consensus       199 ~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~~~~-----------  267 (392)
                      +..|++||++. +++.....+.. ......+..|+.||+.||.|||++.  +|+||||||+|||++.++           
T Consensus       205 ~~~~iv~~~~g-~~l~~~l~~~~-~l~~~~~~~i~~qi~~aL~yLH~~~--gIiHrDlKP~NILl~~~~~~~~~~~~~~~  280 (467)
T PTZ00284        205 GHMCIVMPKYG-PCLLDWIMKHG-PFSHRHLAQIIFQTGVALDYFHTEL--HLMHTDLKPENILMETSDTVVDPVTNRAL  280 (467)
T ss_pred             ceEEEEEeccC-CCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHhcC--CeecCCCCHHHEEEecCCccccccccccc
Confidence            56889999884 44444333332 2344457889999999999999732  799999999999998765           


Q ss_pred             -----CCeEeeeeceEEeCCCCcceeceeeecccccCchhHH------HHHHHhcCCCcc-eeecccccCCCCCCHHH--
Q 045577          268 -----NPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIIDEQTKMKGPFSADE--  333 (392)
Q Consensus       268 -----~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld~~~~~~~~~~~~~--  333 (392)
                           .+||+|||.+....    .......||+.|+| ||+.      .+.|+|++|+++ +++.+++.+.+....+.  
T Consensus       281 ~~~~~~vkl~DfG~~~~~~----~~~~~~~gt~~Y~A-PE~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~  355 (467)
T PTZ00284        281 PPDPCRVRICDLGGCCDER----HSRTAIVSTRHYRS-PEVVLGLGWMYSTDMWSMGCIIYELYTGKLLYDTHDNLEHLH  355 (467)
T ss_pred             CCCCceEEECCCCccccCc----cccccccCCccccC-cHHhhcCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHH
Confidence                 48999999875422    12234679999999 7665      367999999876 56666544432211100  


Q ss_pred             -------------------------------------------------------HHHHHHHHHhhcccCcCCCCCHHHH
Q 045577          334 -------------------------------------------------------LVKCIEVGLLCVQQRIEDWPTMSSV  358 (392)
Q Consensus       334 -------------------------------------------------------~~~~~~i~~~Cl~~dp~~RPsm~eV  358 (392)
                                                                             -..+++++..|++.||++|||+.|+
T Consensus       356 ~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~ta~e~  435 (467)
T PTZ00284        356 LMEKTLGRLPSEWAGRCGTEEARLLYNSAGQLRPCTDPKHLARIARARPVREVIRDDLLCDLIYGLLHYDRQKRLNARQM  435 (467)
T ss_pred             HHHHHcCCCCHHHHhhccchhHHHHhhhcccccccCCHHHHHhhhcccchhhhhchHHHHHHHHHhCCcChhhCCCHHHH
Confidence                                                                   1124578889999999999999999


Q ss_pred             HH
Q 045577          359 LT  360 (392)
Q Consensus       359 v~  360 (392)
                      ++
T Consensus       436 L~  437 (467)
T PTZ00284        436 TT  437 (467)
T ss_pred             hc
Confidence            87

>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

Probab=99.76  E-value=1.4e-18  Score=160.79  Aligned_cols=159  Identities=18%  Similarity=0.204  Sum_probs=116.5

Q ss_pred             CCCeeEEecCccCCCcChhhhhhh-ccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEcCCCCCeEeeeec
Q 045577          198 DGEVFLMFEGIKLPDKSEFTCEFE-CSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEINPNISDFGP  276 (392)
Q Consensus       198 ~~~~~lv~e~~~~~~l~~~~~~~~-~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~~~~~~kl~DFGl  276 (392)
                      ++..+++|||++++++........ ....+..+..++.|++.||.|||+.   +++|+||||+||+++.++.+||+|||.
T Consensus        72 ~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lh~~---~i~H~di~p~Nili~~~~~~~l~d~g~  148 (256)
T cd05039          72 GNPLYIVTEYMAKGSLVDYLRSRGRAVITLAQQLGFALDVCEGMEYLEEK---NFVHRDLAARNVLVSEDLVAKVSDFGL  148 (256)
T ss_pred             CCCeEEEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CccchhcccceEEEeCCCCEEEccccc
Confidence            467899999999988876543332 1234555788999999999999998   899999999999999999999999999


Q ss_pred             eEEeCCCCcceeceeeecccccCchhHH------HHHHHhcCCCcc-eeec-ccccCCCC----------------CCHH
Q 045577          277 ARIFGDQTEEVTGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIID-EQTKMKGP----------------FSAD  332 (392)
Q Consensus       277 a~~~~~~~~~~~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld-~~~~~~~~----------------~~~~  332 (392)
                      ++.......    ....+..|++ ||..      ...|+|+.|+++ +++. +...+...                .+..
T Consensus       149 ~~~~~~~~~----~~~~~~~~~a-pe~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~  223 (256)
T cd05039         149 AKEASQGQD----SGKLPVKWTA-PEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPHVEKGYRMEAPEG  223 (256)
T ss_pred             ccccccccc----cCCCcccccC-chhhcCCcCCcHHHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhcCCCCCCccC
Confidence            986532111    1233456777 5543      267999999876 4443 32221111                0111


Q ss_pred             HHHHHHHHHHhhcccCcCCCCCHHHHHHHHcc
Q 045577          333 ELVKCIEVGLLCVQQRIEDWPTMSSVLTMLSN  364 (392)
Q Consensus       333 ~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~L~~  364 (392)
                      ....+.+++.+|++.+|++||++.+++++|++
T Consensus       224 ~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~  255 (256)
T cd05039         224 CPPEVYKVMKDCWELDPAKRPTFKQLREQLAL  255 (256)
T ss_pred             CCHHHHHHHHHHhccChhhCcCHHHHHHHHhc
Confidence            12456778889999999999999999999975

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk

>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]

Probab=99.76  E-value=6.6e-19  Score=167.42  Aligned_cols=122  Identities=22%  Similarity=0.210  Sum_probs=99.5

Q ss_pred             CCeeEEecCccCCCcChhhhhhhccc-cchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEcCCCCCeEeeeece
Q 045577          199 GEVFLMFEGIKLPDKSEFTCEFECSK-YSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEINPNISDFGPA  277 (392)
Q Consensus       199 ~~~~lv~e~~~~~~l~~~~~~~~~~~-~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~~~~~~kl~DFGla  277 (392)
                      ..+++||..|.+||+.+.+....... .+..++.++.+|+.||++||+.   +|+.||+||+|||||+.|+++|+|+|+|
T Consensus       258 d~LClVLtlMNGGDLkfHiyn~g~~gF~e~ra~FYAAEi~cGLehlH~~---~iVYRDLKPeNILLDd~GhvRISDLGLA  334 (591)
T KOG0986|consen  258 DALCLVLTLMNGGDLKFHIYNHGNPGFDEQRARFYAAEIICGLEHLHRR---RIVYRDLKPENILLDDHGHVRISDLGLA  334 (591)
T ss_pred             CceEEEEEeecCCceeEEeeccCCCCCchHHHHHHHHHHHhhHHHHHhc---ceeeccCChhheeeccCCCeEeeccceE
Confidence            57899999999999998665544333 4444788999999999999998   8999999999999999999999999999


Q ss_pred             EEeCCCCcceeceeeecccccCchhHHH------HHHHhcCCCcc-eeecccccCC
Q 045577          278 RIFGDQTEEVTGRVIGTQTLKTVPELLQ------AWKLWSEGDPM-EIIDEQTKMK  326 (392)
Q Consensus       278 ~~~~~~~~~~~~~~~gt~~y~a~~~~~~------~~diws~G~v~-~~ld~~~~~~  326 (392)
                      .-+..... .. ..+||.|||| ||++.      ..|.|++||++ +|+.++.+++
T Consensus       335 vei~~g~~-~~-~rvGT~GYMA-PEvl~ne~Y~~s~Dwf~lGCllYemi~G~sPFr  387 (591)
T KOG0986|consen  335 VEIPEGKP-IR-GRVGTVGYMA-PEVLQNEVYDFSPDWFSLGCLLYEMIAGHSPFR  387 (591)
T ss_pred             EecCCCCc-cc-cccCcccccC-HHHHcCCcccCCccHHHHHhHHHHHHcccCchh
Confidence            98764322 22 2489999999 77764      67999999977 6777655554

>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4

Probab=99.76  E-value=1.9e-18  Score=159.77  Aligned_cols=157  Identities=25%  Similarity=0.303  Sum_probs=117.4

Q ss_pred             CCeeEEecCccCCCcChhhhhhhc-cccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEcCCCCCeEeeeece
Q 045577          199 GEVFLMFEGIKLPDKSEFTCEFEC-SKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEINPNISDFGPA  277 (392)
Q Consensus       199 ~~~~lv~e~~~~~~l~~~~~~~~~-~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~~~~~~kl~DFGla  277 (392)
                      +..|++|||++++++......... ...+..+..++.+++.||.|||+.   +++|+||||+||+++.++.++|+|||++
T Consensus        73 ~~~~lv~e~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~l~~~l~~lH~~---~i~H~di~p~nil~~~~~~~~l~df~~~  149 (257)
T cd08223          73 GLLYIVMGFCEGGDLYHKLKEQKGKLLPENQVVEWFVQIAMALQYLHEK---HILHRDLKTQNVFLTRTNIIKVGDLGIA  149 (257)
T ss_pred             CEEEEEecccCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCchhEEEecCCcEEEecccce
Confidence            347899999999988765554322 235566889999999999999998   8999999999999999999999999999


Q ss_pred             EEeCCCCcceeceeeecccccCchhHH------HHHHHhcCCCcc-eeecccccCCCCC----------------CHHHH
Q 045577          278 RIFGDQTEEVTGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIIDEQTKMKGPF----------------SADEL  334 (392)
Q Consensus       278 ~~~~~~~~~~~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld~~~~~~~~~----------------~~~~~  334 (392)
                      ........ ......+++.|+| ||..      .+.|+|+.|+++ +++.++..+....                +....
T Consensus       150 ~~~~~~~~-~~~~~~~~~~y~a-PE~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (257)
T cd08223         150 RVLENQCD-MASTLIGTPYYMS-PELFSNKPYNYKSDVWALGCCVYEMATLKHAFNAKDMNSLVYRIIEGKLPPMPKDYS  227 (257)
T ss_pred             EEecccCC-ccccccCCcCccC-hhHhcCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcCCCCCccccC
Confidence            87653221 2233567889999 7754      367999999876 4444432222111                11122


Q ss_pred             HHHHHHHHhhcccCcCCCCCHHHHHH
Q 045577          335 VKCIEVGLLCVQQRIEDWPTMSSVLT  360 (392)
Q Consensus       335 ~~~~~i~~~Cl~~dp~~RPsm~eVv~  360 (392)
                      ..+.+++.+|++.+|++||++.++++
T Consensus       228 ~~~~~li~~~l~~~p~~Rp~~~~~l~  253 (257)
T cd08223         228 PELGELIATMLSKRPEKRPSVKSILR  253 (257)
T ss_pred             HHHHHHHHHHhccCcccCCCHHHHhc
Confidence            35667888999999999999999875

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.

>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

Probab=99.76  E-value=8.9e-19  Score=164.68  Aligned_cols=170  Identities=24%  Similarity=0.314  Sum_probs=121.2

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEc
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLD  264 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~  264 (392)
                      |++.++........+..|+++||++++.+....... ....+..+..++.|++.||.|||+.   +++|+|++|+||+++
T Consensus        59 h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~-~~~~~~~~~~~~~~i~~~l~~LH~~---~i~h~~l~p~ni~~~  134 (286)
T cd07846          59 HENLVNLIEVFRRKKRLYLVFEFVDHTVLDDLEKYP-NGLDESRVRKYLFQILRGIEFCHSH---NIIHRDIKPENILVS  134 (286)
T ss_pred             CcchhhHHHhcccCCeEEEEEecCCccHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEC
Confidence            444444444434456789999999987776533221 1234555788999999999999998   899999999999999


Q ss_pred             CCCCCeEeeeeceEEeCCCCcceeceeeecccccCchhHH-------HHHHHhcCCCcc-eeecccccCCCCCCHH----
Q 045577          265 AEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELL-------QAWKLWSEGDPM-EIIDEQTKMKGPFSAD----  332 (392)
Q Consensus       265 ~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~-------~~~diws~G~v~-~~ld~~~~~~~~~~~~----  332 (392)
                      .++.+||+|||++........ ......++..|++ ||..       .+.|+|+.|+++ +++.+.+.+......+    
T Consensus       135 ~~~~~~l~dfg~~~~~~~~~~-~~~~~~~~~~y~a-PE~~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~  212 (286)
T cd07846         135 QSGVVKLCDFGFARTLAAPGE-VYTDYVATRWYRA-PELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPGDSDIDQLYH  212 (286)
T ss_pred             CCCcEEEEeeeeeeeccCCcc-ccCcccceeeccC-cHHhccccccCchHhHHHHHHHHHHHHcCCCCCCCCchHHHHHH
Confidence            999999999999987643222 2223457888998 6643       358999999876 5555543332211111    


Q ss_pred             ------------------------------------------HHHHHHHHHHhhcccCcCCCCCHHHHHH
Q 045577          333 ------------------------------------------ELVKCIEVGLLCVQQRIEDWPTMSSVLT  360 (392)
Q Consensus       333 ------------------------------------------~~~~~~~i~~~Cl~~dp~~RPsm~eVv~  360 (392)
                                                                ....+.+++.+|++.+|++||++.++++
T Consensus       213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~  282 (286)
T cd07846         213 IIKCLGNLIPRHQEIFQKNPLFAGMRLPEVKEIEPLEKRFPKLSGLVLDLAKQCLRIDPDDRPSSSQLLH  282 (286)
T ss_pred             HHHHhCCCchhhHHHhccchHhhccccccccCcchHHHhCCCcCHHHHHHHHHHhcCCcccchhHHHHhc
Confidence                                                      1234667888999999999999999875

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI

>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

Probab=99.76  E-value=7.2e-19  Score=165.24  Aligned_cols=170  Identities=18%  Similarity=0.264  Sum_probs=120.5

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhh-hccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEE
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEF-ECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLL  263 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~-~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll  263 (392)
                      |++.++.....+.++..+++|||+.. ++....... ........+..++.|++.||.|||+.   +++|+||+|+||++
T Consensus        58 h~~i~~~~~~~~~~~~~~~v~e~~~~-~l~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~---~i~H~~l~p~nill  133 (284)
T cd07860          58 HPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASPLSGIPLPLIKSYLFQLLQGLAFCHSH---RVLHRDLKPQNLLI  133 (284)
T ss_pred             CCCCcchhhhcccCCcEEEEeecccc-CHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEE
Confidence            66777776666667789999999974 454433221 22234555788999999999999998   89999999999999


Q ss_pred             cCCCCCeEeeeeceEEeCCCCcceeceeeecccccCchhH-------HHHHHHhcCCCcc-eeecccccCCCCCCHHH--
Q 045577          264 DAEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPEL-------LQAWKLWSEGDPM-EIIDEQTKMKGPFSADE--  333 (392)
Q Consensus       264 ~~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~-------~~~~diws~G~v~-~~ld~~~~~~~~~~~~~--  333 (392)
                      +.++.+||+|||+++....... ......++..|++ ||.       ....|+|+.|+++ +++.+...+.+....+.  
T Consensus       134 ~~~~~~~l~dfg~~~~~~~~~~-~~~~~~~~~~y~a-PE~~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~  211 (284)
T cd07860         134 NTEGAIKLADFGLARAFGVPVR-TYTHEVVTLWYRA-PEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF  211 (284)
T ss_pred             CCCCCEEEeeccchhhcccCcc-ccccccccccccC-CeEEecCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHH
Confidence            9999999999999876542211 1122346778888 553       2468999999876 56655433322211110  


Q ss_pred             ------------------------------------------HHHHHHHHHhhcccCcCCCCCHHHHHH
Q 045577          334 ------------------------------------------LVKCIEVGLLCVQQRIEDWPTMSSVLT  360 (392)
Q Consensus       334 ------------------------------------------~~~~~~i~~~Cl~~dp~~RPsm~eVv~  360 (392)
                                                                ...+.+++..|++.||++||++.++++
T Consensus       212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~  280 (284)
T cd07860         212 RIFRTLGTPDEVVWPGVTSLPDYKPSFPKWARQDFSKVVPPLDEDGRDLLSQMLHYDPNKRISAKAALA  280 (284)
T ss_pred             HHHHHhCCCChhhhhhhhHHHHHHhhcccccccCHHHHcccCCHHHHHHHHHhcCCCcccCCCHHHHhc
Confidence                                                      123446788999999999999999875

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex

>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]

Probab=99.76  E-value=1.2e-18  Score=154.21  Aligned_cols=163  Identities=21%  Similarity=0.201  Sum_probs=117.7

Q ss_pred             CCeeEEecCccCCCcChhhhh--hhc-cccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEcCCCCCeEeeee
Q 045577          199 GEVFLMFEGIKLPDKSEFTCE--FEC-SKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEINPNISDFG  275 (392)
Q Consensus       199 ~~~~lv~e~~~~~~l~~~~~~--~~~-~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~~~~~~kl~DFG  275 (392)
                      ...|+++.|...|++.+...+  .+. ...+...+.|+.+|++||++||+.. ++..||||||.|||+.+++.+++.|||
T Consensus        96 ~~~yll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~~~-~~yAH~DiKP~NILls~~~~~vl~D~G  174 (302)
T KOG2345|consen   96 HEAYLLLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHEKE-PPYAHRDIKPANILLSDSGLPVLMDLG  174 (302)
T ss_pred             eeEEEEeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhccC-CcccccCCCcceeEecCCCceEEEecc
Confidence            468999999999987763322  222 2256668999999999999999973 359999999999999999999999999


Q ss_pred             ceEEeCCCCcce--------eceeeecccccCchhHH---------HHHHHhcCCCccee--------------------
Q 045577          276 PARIFGDQTEEV--------TGRVIGTQTLKTVPELL---------QAWKLWSEGDPMEI--------------------  318 (392)
Q Consensus       276 la~~~~~~~~~~--------~~~~~gt~~y~a~~~~~---------~~~diws~G~v~~~--------------------  318 (392)
                      .+....-+....        ......|..|.| ||+.         .+.|+||+||.++.                    
T Consensus       175 S~~~a~i~i~~~~~a~~lQe~a~e~Ct~pyRA-PELf~vk~~~ti~ertDIWSLGCtLYa~mf~~sPfe~~~~~GgSlaL  253 (302)
T KOG2345|consen  175 SATQAPIQIEGSRQALRLQEWAEERCTIPYRA-PELFNVKSHCTITERTDIWSLGCTLYAMMFGESPFERIYQQGGSLAL  253 (302)
T ss_pred             CccccceEeechHHHHHHHHHHHHhCCCcccC-chheecccCcccccccchhhhhHHHHHHHHcCCcchHHhhcCCeEEE
Confidence            887653111000        011245778888 5543         47899999998721                    


Q ss_pred             --ecccccCCCCCCHHHHHHHHHHHHhhcccCcCCCCCHHHHHHHHccC
Q 045577          319 --IDEQTKMKGPFSADELVKCIEVGLLCVQQRIEDWPTMSSVLTMLSNE  365 (392)
Q Consensus       319 --ld~~~~~~~~~~~~~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~L~~~  365 (392)
                        ..++..++..  ....+.+.+++.+|+|.||.+||++.+++..++..
T Consensus       254 Av~n~q~s~P~~--~~yse~l~~lik~mlqvdP~qRP~i~~ll~~~d~L  300 (302)
T KOG2345|consen  254 AVQNAQISIPNS--SRYSEALHQLIKSMLQVDPNQRPTIPELLSKLDDL  300 (302)
T ss_pred             eeeccccccCCC--CCccHHHHHHHHHHhcCCcccCCCHHHHHHHHHhh
Confidence              1111112211  12445677888899999999999999999998764

>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2

Probab=99.76  E-value=1.1e-18  Score=170.27  Aligned_cols=159  Identities=19%  Similarity=0.208  Sum_probs=111.1

Q ss_pred             CCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEcCCCCCeEeeeec
Q 045577          197 GDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEINPNISDFGP  276 (392)
Q Consensus       197 ~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~~~~~~kl~DFGl  276 (392)
                      ..+..|++|||++++++.....+... .....+..++.|++.||.|||+.   +|+||||||+||+++.++.+||+|||+
T Consensus        72 ~~~~~~lv~E~~~gg~L~~~l~~~~~-l~~~~~~~~~~qi~~~L~~lH~~---givHrDLkp~NIli~~~~~vkL~DfG~  147 (360)
T cd05627          72 DKRNLYLIMEFLPGGDMMTLLMKKDT-LSEEATQFYIAETVLAIDAIHQL---GFIHRDIKPDNLLLDAKGHVKLSDFGL  147 (360)
T ss_pred             cCCEEEEEEeCCCCccHHHHHHhcCC-CCHHHHHHHHHHHHHHHHHHHHC---CeEccCCCHHHEEECCCCCEEEeeccC
Confidence            34678999999999998876554433 23444778999999999999998   899999999999999999999999999


Q ss_pred             eEEeCCCCc----------------------------------ceeceeeecccccCchhHHH------HHHHhcCCCcc
Q 045577          277 ARIFGDQTE----------------------------------EVTGRVIGTQTLKTVPELLQ------AWKLWSEGDPM  316 (392)
Q Consensus       277 a~~~~~~~~----------------------------------~~~~~~~gt~~y~a~~~~~~------~~diws~G~v~  316 (392)
                      ++.......                                  .......||+.|+| ||+..      ..|+|+.|+++
T Consensus       148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~A-PE~~~~~~~~~~~DiwSlGvil  226 (360)
T cd05627         148 CTGLKKAHRTEFYRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIA-PEVFMQTGYNKLCDWWSLGVIM  226 (360)
T ss_pred             CcccccccccccccccccCCcccccccccccccccccccccccccccccCCCccccC-HHHHcCCCCCCcceecccccee
Confidence            875421100                                  00112469999999 77653      67999999987


Q ss_pred             -eeecccccCCCCCCHHHH-------------------HHHHHHHHhhcccCcCCCCC---HHHHHHH
Q 045577          317 -EIIDEQTKMKGPFSADEL-------------------VKCIEVGLLCVQQRIEDWPT---MSSVLTM  361 (392)
Q Consensus       317 -~~ld~~~~~~~~~~~~~~-------------------~~~~~i~~~Cl~~dp~~RPs---m~eVv~~  361 (392)
                       +++.+.+++......+..                   ..+.+++..++ .+|++|++   +.++.+.
T Consensus       227 yel~tG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~l~-~~p~~R~~~~~~~ei~~h  293 (360)
T cd05627         227 YEMLIGYPPFCSETPQETYRKVMNWKETLVFPPEVPISEKAKDLILRFC-TDSENRIGSNGVEEIKSH  293 (360)
T ss_pred             eecccCCCCCCCCCHHHHHHHHHcCCCceecCCCCCCCHHHHHHHHHhc-cChhhcCCCCCHHHHhcC
Confidence             566665444333222211                   13334444544 48888885   5555543

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul

>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

Probab=99.76  E-value=9.5e-19  Score=164.18  Aligned_cols=161  Identities=18%  Similarity=0.259  Sum_probs=118.3

Q ss_pred             CCCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEcCCCCCeEeeee
Q 045577          196 CGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEINPNISDFG  275 (392)
Q Consensus       196 C~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~~~~~~kl~DFG  275 (392)
                      ..++..|++|||++++++.....+.........+..++.|++.||.|||+.   +++|+||||+||+++.++.+||+|||
T Consensus        72 ~~~~~~~lv~e~~~~~~L~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~---~i~h~dl~p~nili~~~~~~~l~d~g  148 (280)
T cd06611          72 FYENKLWILIEFCDGGALDSIMLELERGLTEPQIRYVCRQMLEALNFLHSH---KVIHRDLKAGNILLTLDGDVKLADFG  148 (280)
T ss_pred             ecCCeEEEEeeccCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChhhEEECCCCCEEEccCc
Confidence            335678999999999999775544333345556788999999999999998   89999999999999999999999999


Q ss_pred             ceEEeCCCCcceeceeeecccccCchhHHH-----------HHHHhcCCCcc-eeecccccCCCCC--------------
Q 045577          276 PARIFGDQTEEVTGRVIGTQTLKTVPELLQ-----------AWKLWSEGDPM-EIIDEQTKMKGPF--------------  329 (392)
Q Consensus       276 la~~~~~~~~~~~~~~~gt~~y~a~~~~~~-----------~~diws~G~v~-~~ld~~~~~~~~~--------------  329 (392)
                      ++........ ......++..|++ ||...           ..|+|+.|+++ +++.+.+++....              
T Consensus       149 ~~~~~~~~~~-~~~~~~~~~~y~~-PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~  226 (280)
T cd06611         149 VSAKNKSTLQ-KRDTFIGTPYWMA-PEVVACETFKDNPYDYKADIWSLGITLIELAQMEPPHHELNPMRVLLKILKSEPP  226 (280)
T ss_pred             cchhhccccc-ccceeecchhhcC-HHHHhhcccCCCCCCccccHHHHHHHHHHHHhCCCCcccCCHHHHHHHHhcCCCC
Confidence            8865432211 2223568889999 66542           57999999876 4444433322111              


Q ss_pred             ----CHHHHHHHHHHHHhhcccCcCCCCCHHHHHHH
Q 045577          330 ----SADELVKCIEVGLLCVQQRIEDWPTMSSVLTM  361 (392)
Q Consensus       330 ----~~~~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~  361 (392)
                          +......+.+++..|++.+|++||++.+|++.
T Consensus       227 ~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~  262 (280)
T cd06611         227 TLDQPSKWSSSFNDFLKSCLVKDPDDRPTAAELLKH  262 (280)
T ss_pred             CcCCcccCCHHHHHHHHHHhccChhhCcCHHHHhcC
Confidence                01112356677889999999999999998764

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti

>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4

Probab=99.76  E-value=1.2e-18  Score=163.67  Aligned_cols=170  Identities=19%  Similarity=0.249  Sum_probs=119.7

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEc
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLD  264 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~  264 (392)
                      |++.++.......+...+++|||++++.+....... ....+..+..++.|++.||.|||+.   +++|+||||+||+++
T Consensus        59 h~~i~~~~~~~~~~~~~~~v~e~~~~~~l~~~~~~~-~~~~~~~~~~~~~ql~~~l~~LH~~---~i~H~dl~p~nil~~  134 (286)
T cd07847          59 HPNLVNLIEVFRRKRKLHLVFEYCDHTVLNELEKNP-RGVPEHLIKKIIWQTLQAVNFCHKH---NCIHRDVKPENILIT  134 (286)
T ss_pred             CCCEeeeeeEEeeCCEEEEEEeccCccHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCChhhEEEc
Confidence            333333333333345789999999987776543222 2234555789999999999999997   899999999999999


Q ss_pred             CCCCCeEeeeeceEEeCCCCcceeceeeecccccCchhHH-------HHHHHhcCCCcc-eeecccccCCCCCCHHH---
Q 045577          265 AEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELL-------QAWKLWSEGDPM-EIIDEQTKMKGPFSADE---  333 (392)
Q Consensus       265 ~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~-------~~~diws~G~v~-~~ld~~~~~~~~~~~~~---  333 (392)
                      .++.+||+|||++........ ......++..|++ ||..       .+.|+|+.|+++ +++.+.+.+.+....+.   
T Consensus       135 ~~~~~~l~dfg~~~~~~~~~~-~~~~~~~~~~~~a-PE~~~~~~~~~~~~Di~slG~i~~~l~~g~~p~~~~~~~~~~~~  212 (286)
T cd07847         135 KQGQIKLCDFGFARILTGPGD-DYTDYVATRWYRA-PELLVGDTQYGPPVDVWAIGCVFAELLTGQPLWPGKSDVDQLYL  212 (286)
T ss_pred             CCCcEEECccccceecCCCcc-cccCcccccccCC-HHHHhCCCCcCchhhhHHHHHHHHHHHhCCCCCCCCChHHHHHH
Confidence            999999999999987653221 1222456778888 6653       267999999876 55555433322211111   


Q ss_pred             -------------------------------------------HHHHHHHHHhhcccCcCCCCCHHHHHH
Q 045577          334 -------------------------------------------LVKCIEVGLLCVQQRIEDWPTMSSVLT  360 (392)
Q Consensus       334 -------------------------------------------~~~~~~i~~~Cl~~dp~~RPsm~eVv~  360 (392)
                                                                 ...+.+++.+|++.+|++||++.++++
T Consensus       213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~  282 (286)
T cd07847         213 IRKTLGDLIPRHQQIFSTNQFFKGLSIPEPETREPLESKFPNISSPALSFLKGCLQMDPTERLSCEELLE  282 (286)
T ss_pred             HHHHhCCCChHHhhhcccccccccccCCCcccccCHHHHhccCCHHHHHHHHHHhcCCccccCCHHHHhc
Confidence                                                       123567888999999999999998875

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio

>PLN03225 Serine/threonine-protein kinase SNT7; Provisional

Probab=99.76  E-value=7.6e-19  Score=180.50  Aligned_cols=158  Identities=14%  Similarity=0.126  Sum_probs=110.3

Q ss_pred             CCCeeEEecCccCCCcChhhhhhhccc-------------------cchhhhhHHHHHHHhhhhcCcCCCCceeeccccc
Q 045577          198 DGEVFLMFEGIKLPDKSEFTCEFECSK-------------------YSSYVTNILYGIARVILYLPEDSRLEIIHRDHKT  258 (392)
Q Consensus       198 ~~~~~lv~e~~~~~~l~~~~~~~~~~~-------------------~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp  258 (392)
                      +...++++||+.++++...........                   ....+..++.|++.||.|||+.   +|+||||||
T Consensus       207 ~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~~---gIiHRDLKP  283 (566)
T PLN03225        207 EDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHST---GIVHRDVKP  283 (566)
T ss_pred             CCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHHC---CEEeCcCCH
Confidence            457899999999988765433221100                   1122457899999999999998   899999999


Q ss_pred             ceeEEcC-CCCCeEeeeeceEEeCCCCcceeceeeecccccCchhHHH----------------------------HHHH
Q 045577          259 SNVLLDA-EINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELLQ----------------------------AWKL  309 (392)
Q Consensus       259 ~NIll~~-~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~~----------------------------~~di  309 (392)
                      +|||++. ++.+||+|||+++.+............+++.||| ||...                            ..|+
T Consensus       284 ~NILl~~~~~~~KL~DFGlA~~l~~~~~~~~~~~~~t~~Y~A-PE~~~~~~~~~~~~~~~~~~~~sp~l~~~~~~~k~DV  362 (566)
T PLN03225        284 QNIIFSEGSGSFKIIDLGAAADLRVGINYIPKEFLLDPRYAA-PEQYIMSTQTPSAPSAPVATALSPVLWQLNLPDRFDI  362 (566)
T ss_pred             HHEEEeCCCCcEEEEeCCCccccccccccCCcccccCCCccC-hHHhhccCCCCCCccccccccccchhccccCCCCccc
Confidence            9999985 5789999999998764333333445678999999 66321                            2399


Q ss_pred             hcCCCcc-eeecccccCCCCCCH--------------------------HH-----------HHHHHHHHHhhcccCcCC
Q 045577          310 WSEGDPM-EIIDEQTKMKGPFSA--------------------------DE-----------LVKCIEVGLLCVQQRIED  351 (392)
Q Consensus       310 ws~G~v~-~~ld~~~~~~~~~~~--------------------------~~-----------~~~~~~i~~~Cl~~dp~~  351 (392)
                      |+.|+++ +++.+  .+..+...                          .+           .....+++..|++.||++
T Consensus       363 wSlGviL~el~~~--~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~dLi~~mL~~dP~k  440 (566)
T PLN03225        363 YSAGLIFLQMAFP--NLRSDSNLIQFNRQLKRNDYDLVAWRKLVEPRASPDLRRGFEVLDLDGGAGWELLKSMMRFKGRQ  440 (566)
T ss_pred             HHHHHHHHHHHhC--cCCCchHHHHHHHHHHhcCCcHHHHHHhhccccchhhhhhhhhccccchHHHHHHHHHccCCccc
Confidence            9999987 34332  11111000                          00           001236788999999999


Q ss_pred             CCCHHHHHHH
Q 045577          352 WPTMSSVLTM  361 (392)
Q Consensus       352 RPsm~eVv~~  361 (392)
                      |||+.++++.
T Consensus       441 R~ta~e~L~H  450 (566)
T PLN03225        441 RISAKAALAH  450 (566)
T ss_pred             CCCHHHHhCC
Confidence            9999999875

>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase

Probab=99.76  E-value=1.4e-18  Score=164.99  Aligned_cols=170  Identities=18%  Similarity=0.205  Sum_probs=117.9

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEc
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLD  264 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~  264 (392)
                      |++.++........+..|++|||+++ ++.....+.........+..++.|++.||.|||+.   +++|+||||+||+++
T Consensus        63 h~nI~~~~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~lH~~---~i~H~dlkp~Nil~~  138 (301)
T cd07873          63 HANIVTLHDIIHTEKSLTLVFEYLDK-DLKQYLDDCGNSINMHNVKLFLFQLLRGLNYCHRR---KVLHRDLKPQNLLIN  138 (301)
T ss_pred             CCCcceEEEEEecCCeEEEEEecccc-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHHHEEEC
Confidence            44444444444445678999999984 44443222221223445788899999999999998   899999999999999


Q ss_pred             CCCCCeEeeeeceEEeCCCCcceeceeeecccccCchhHH-------HHHHHhcCCCcc-eeecccccCCCCCCHH----
Q 045577          265 AEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELL-------QAWKLWSEGDPM-EIIDEQTKMKGPFSAD----  332 (392)
Q Consensus       265 ~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~-------~~~diws~G~v~-~~ld~~~~~~~~~~~~----  332 (392)
                      .++.+||+|||++......... .....++..|++ ||..       ...|+|+.|+++ +++.+.+.+......+    
T Consensus       139 ~~~~~kl~dfg~~~~~~~~~~~-~~~~~~~~~y~~-PE~~~~~~~~~~~~Dv~slG~~l~el~tg~~~f~~~~~~~~~~~  216 (301)
T cd07873         139 ERGELKLADFGLARAKSIPTKT-YSNEVVTLWYRP-PDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGSTVEEQLHF  216 (301)
T ss_pred             CCCcEEECcCcchhccCCCCCc-ccccceeecccC-cHHHhCCCCCccHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHH
Confidence            9999999999998765422111 122456788999 6653       367999999876 5555543332211100    


Q ss_pred             -----------------------------------------HHHHHHHHHHhhcccCcCCCCCHHHHHH
Q 045577          333 -----------------------------------------ELVKCIEVGLLCVQQRIEDWPTMSSVLT  360 (392)
Q Consensus       333 -----------------------------------------~~~~~~~i~~~Cl~~dp~~RPsm~eVv~  360 (392)
                                                               ....+.+++.+|++.||.+|||+.++++
T Consensus       217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~eil~  285 (301)
T cd07873         217 IFRILGTPTEETWPGILSNEEFKSYNYPKYRADCLHNHAPRLDSDGAELLSKLLQFEGRKRISAEEAMK  285 (301)
T ss_pred             HHHHcCCCChhhchhhhccccccccccCccccccHHhhcCCCCHHHHHHHHHHhcCCcccCcCHHHHhc
Confidence                                                     0123456888999999999999999987

Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl

>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

Probab=99.75  E-value=6.7e-19  Score=165.55  Aligned_cols=171  Identities=21%  Similarity=0.288  Sum_probs=121.4

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEc
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLD  264 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~  264 (392)
                      |++.++.......++..+++|||++++.+.....+... .....+..++.|++.||.|||+.   +++|+|++|+||+++
T Consensus        59 ~~~i~~~~~~~~~~~~~~iv~e~~~~~~l~~~~~~~~~-~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~~~ni~~~  134 (288)
T cd07833          59 HENIVNLKEAFRRKGRLYLVFEYVERTLLELLEASPGG-LPPDAVRSYIWQLLQAIAYCHSH---NIIHRDIKPENILVS  134 (288)
T ss_pred             CCCeeehhheEEECCEEEEEEecCCCCHHHHHHhcCCC-CCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEEC
Confidence            45555555554445679999999997666543222222 34445788999999999999998   899999999999999


Q ss_pred             CCCCCeEeeeeceEEeCCCCcceeceeeecccccCchhHH-------HHHHHhcCCCcc-eeecccccCCCCCC------
Q 045577          265 AEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELL-------QAWKLWSEGDPM-EIIDEQTKMKGPFS------  330 (392)
Q Consensus       265 ~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~-------~~~diws~G~v~-~~ld~~~~~~~~~~------  330 (392)
                      .++.+||+|||++...............++..|++ ||+.       ...|+|+.|+++ +++.+.+.+.+...      
T Consensus       135 ~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~~~-PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~  213 (288)
T cd07833         135 ESGVLKLCDFGFARALRARPASPLTDYVATRWYRA-PELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPGDSDIDQLYL  213 (288)
T ss_pred             CCCCEEEEeeecccccCCCccccccCcccccCCcC-CchhcCCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHH
Confidence            99999999999988765332222233567888998 5543       367999999876 44444322211100      


Q ss_pred             -----------------------------------------HHHHHHHHHHHHhhcccCcCCCCCHHHHHH
Q 045577          331 -----------------------------------------ADELVKCIEVGLLCVQQRIEDWPTMSSVLT  360 (392)
Q Consensus       331 -----------------------------------------~~~~~~~~~i~~~Cl~~dp~~RPsm~eVv~  360 (392)
                                                               ......+.+++..|++.+|++||+++++++
T Consensus       214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~  284 (288)
T cd07833         214 IQKCLGPLPPSHQELFSSNPRFAGVAFPEPSQPESLERRYPGKVSSPALDFLKACLRMDPKERLTCDELLQ  284 (288)
T ss_pred             HHHHhCCCCHHHhhhcccCccccccccCCCCCcHHHHHhcCCccchHHHHHHHHHhccCchhcccHHHHhc
Confidence                                                     001345678888999999999999999875

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning

>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase

Probab=99.75  E-value=8.5e-19  Score=167.33  Aligned_cols=170  Identities=21%  Similarity=0.268  Sum_probs=121.9

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEc
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLD  264 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~  264 (392)
                      |++.++.......++..|++|||++++++.....+... .....+..++.|++.||.|||+.+  +++|+||||.||+++
T Consensus        58 h~~iv~~~~~~~~~~~~~lv~ey~~~~~L~~~l~~~~~-~~~~~~~~~~~~i~~~l~~lH~~~--~i~H~dl~p~nil~~  134 (308)
T cd06615          58 SPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR-IPENILGKISIAVLRGLTYLREKH--KIMHRDVKPSNILVN  134 (308)
T ss_pred             CCCCCeEEEEEeeCCEEEEEeeccCCCcHHHHHHhcCC-CCHHHHHHHHHHHHHHHHHHHhhC--CEEECCCChHHEEEe
Confidence            45555555444456789999999999998776544322 244457889999999999999732  799999999999999


Q ss_pred             CCCCCeEeeeeceEEeCCCCcceeceeeecccccCchhHHH------HHHHhcCCCcc-eeecccccCCCCCC-------
Q 045577          265 AEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELLQ------AWKLWSEGDPM-EIIDEQTKMKGPFS-------  330 (392)
Q Consensus       265 ~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~~------~~diws~G~v~-~~ld~~~~~~~~~~-------  330 (392)
                      .++.+||+|||++......   ......|+..|++ ||...      ..|+|+.|+++ +++.+..++.....       
T Consensus       135 ~~~~~~l~dfg~~~~~~~~---~~~~~~~~~~~~a-PE~~~~~~~~~~~DiwslG~~l~~l~~g~~p~~~~~~~~~~~~~  210 (308)
T cd06615         135 SRGEIKLCDFGVSGQLIDS---MANSFVGTRSYMS-PERLQGTHYTVQSDIWSLGLSLVEMAIGRYPIPPPDAKELEAMF  210 (308)
T ss_pred             cCCcEEEccCCCccccccc---ccccCCCCcCccC-hhHhcCCCCCccchHHHHHHHHHHHHhCCCCCCCcchhhHHHhh
Confidence            9999999999998754321   1223467888999 66542      57999999876 44443222110000       


Q ss_pred             ----------------------------------------------HHHHHHHHHHHHhhcccCcCCCCCHHHHHHH
Q 045577          331 ----------------------------------------------ADELVKCIEVGLLCVQQRIEDWPTMSSVLTM  361 (392)
Q Consensus       331 ----------------------------------------------~~~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~  361 (392)
                                                                    ......+.+++.+|++.+|++||++.+|++.
T Consensus       211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~  287 (308)
T cd06615         211 GRPVSEGEAKESHRPVSGHPPDSPRPMAIFELLDYIVNEPPPKLPSGAFSDEFQDFVDKCLKKNPKERADLKELTKH  287 (308)
T ss_pred             cCccccccccCCcccccCCCCCccchhhHHHHHHHHhcCCCccCcCcccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence                                                          0011246688889999999999999999876

Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down

>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1

Probab=99.75  E-value=7.3e-19  Score=172.94  Aligned_cols=170  Identities=16%  Similarity=0.184  Sum_probs=114.4

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEc
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLD  264 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~  264 (392)
                      |++.++.......++..|+||||++++++.....+.. ...+..+..++.||+.||.|||+.   +|+||||||+|||++
T Consensus        60 h~~iv~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~-~~~e~~~~~~~~qi~~al~~lH~~---~ivHrDlKp~NILl~  135 (382)
T cd05625          60 NEWVVRLYYSFQDKDNLYFVMDYIPGGDMMSLLIRMG-IFPEDLARFYIAELTCAVESVHKM---GFIHRDIKPDNILID  135 (382)
T ss_pred             CCcCCeEEEEEEeCCEEEEEEeCCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEC
Confidence            3444444333334567899999999999877554332 234555778899999999999998   899999999999999


Q ss_pred             CCCCCeEeeeeceEEeCCC----------------------------------------------Ccceeceeeeccccc
Q 045577          265 AEINPNISDFGPARIFGDQ----------------------------------------------TEEVTGRVIGTQTLK  298 (392)
Q Consensus       265 ~~~~~kl~DFGla~~~~~~----------------------------------------------~~~~~~~~~gt~~y~  298 (392)
                      .++.+||+|||++..+...                                              .........||+.|+
T Consensus       136 ~~g~~kL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~  215 (382)
T cd05625         136 RDGHIKLTDFGLCTGFRWTHDSKYYQSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYI  215 (382)
T ss_pred             CCCCEEEeECCCCccccccccccccccccccccccccccccccccccccccccccchhhhhccccccccccccccCcccC
Confidence            9999999999997532100                                              000012246899999


Q ss_pred             CchhHHH------HHHHhcCCCcc-eeecccccCCCCCCHHHH-------------------HHHHHHHHhhcccCcCCC
Q 045577          299 TVPELLQ------AWKLWSEGDPM-EIIDEQTKMKGPFSADEL-------------------VKCIEVGLLCVQQRIEDW  352 (392)
Q Consensus       299 a~~~~~~------~~diws~G~v~-~~ld~~~~~~~~~~~~~~-------------------~~~~~i~~~Cl~~dp~~R  352 (392)
                      | ||+..      +.|+|+.|+++ +++.+.+++.+..+.+..                   ..+.+++..++ .+|++|
T Consensus       216 a-PE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~l~-~~p~~R  293 (382)
T cd05625         216 A-PEVLLRTGYTQLCDWWSVGVILYEMLVGQPPFLAQTPLETQMKVINWQTSLHIPPQAKLSPEASDLIIKLC-RGPEDR  293 (382)
T ss_pred             C-HHHhcCCCCCCeeeEEechHHHHHHHhCCCCCCCCCHHHHHHHHHccCCCcCCCCcccCCHHHHHHHHHHc-cCHhHc
Confidence            9 77653      57999999987 566665444332211111                   12233333443 489999


Q ss_pred             CC---HHHHHH
Q 045577          353 PT---MSSVLT  360 (392)
Q Consensus       353 Ps---m~eVv~  360 (392)
                      ++   +.++++
T Consensus       294 ~~~~~~~ei~~  304 (382)
T cd05625         294 LGKNGADEIKA  304 (382)
T ss_pred             CCCCCHHHHhc
Confidence            87   777654

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an

>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6

Probab=99.75  E-value=9.3e-19  Score=167.24  Aligned_cols=123  Identities=28%  Similarity=0.386  Sum_probs=87.1

Q ss_pred             CCCeeEEecCccCCCcChhhhh-------hhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEE----cCC
Q 045577          198 DGEVFLMFEGIKLPDKSEFTCE-------FECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLL----DAE  266 (392)
Q Consensus       198 ~~~~~lv~e~~~~~~l~~~~~~-------~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll----~~~  266 (392)
                      +...+++|||+.++........       .........+..++.|++.||.|||+.   +++||||||+||++    +.+
T Consensus        72 ~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~---~ivH~Dlkp~Nil~~~~~~~~  148 (317)
T cd07867          72 DRKVWLLFDYAEHDLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHAN---WVLHRDLKPANILVMGEGPER  148 (317)
T ss_pred             CCeEEEEEeeeCCcHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhC---CEEcCCCCHHHEEEccCCCCC
Confidence            3567999999886432221110       011123445678999999999999998   89999999999999    556


Q ss_pred             CCCeEeeeeceEEeCCCCc--ceeceeeecccccCchhHH-------HHHHHhcCCCcc-eeeccccc
Q 045577          267 INPNISDFGPARIFGDQTE--EVTGRVIGTQTLKTVPELL-------QAWKLWSEGDPM-EIIDEQTK  324 (392)
Q Consensus       267 ~~~kl~DFGla~~~~~~~~--~~~~~~~gt~~y~a~~~~~-------~~~diws~G~v~-~~ld~~~~  324 (392)
                      +.+||+|||+++.......  .......||+.|+| ||..       ...|+|+.|+++ +++.+.+.
T Consensus       149 ~~~kl~DfG~a~~~~~~~~~~~~~~~~~~t~~y~a-PE~~~~~~~~~~~~DiwSlG~il~el~tg~~~  215 (317)
T cd07867         149 GRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRA-PELLLGARHYTKAIDIWAIGCIFAELLTSEPI  215 (317)
T ss_pred             CcEEEeeccceeccCCCcccccccCcceecccccC-cHHhcCCCccCcHHHHHhHHHHHHHHHhCCCC
Confidence            7899999999987652211  12234578999999 6644       367999999876 55555433

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as

>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

Probab=99.75  E-value=8.8e-19  Score=166.25  Aligned_cols=170  Identities=16%  Similarity=0.264  Sum_probs=121.7

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEc
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLD  264 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~  264 (392)
                      |++.++.......+...|++|||++++++.....+ .+ .....+..++.|++.||.|||+.   +++|+||||+||+++
T Consensus        76 h~~v~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~-~~-~~~~~~~~i~~ql~~aL~~LH~~---gi~H~dLkp~Nill~  150 (296)
T cd06654          76 NPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTE-TC-MDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLG  150 (296)
T ss_pred             CCCEeeEEEEEEeCCEEEEeecccCCCCHHHHHHh-cC-CCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEc
Confidence            33333333333335678999999999998775533 22 23445788999999999999998   899999999999999


Q ss_pred             CCCCCeEeeeeceEEeCCCCcceeceeeecccccCchhHH------HHHHHhcCCCcc-eeecccccCCCCC--------
Q 045577          265 AEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIIDEQTKMKGPF--------  329 (392)
Q Consensus       265 ~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld~~~~~~~~~--------  329 (392)
                      .++.+||+|||++........ ......+++.|++ ||..      .+.|+|+.|+++ +++.+..++....        
T Consensus       151 ~~~~~kl~dfg~~~~~~~~~~-~~~~~~~~~~y~a-PE~~~~~~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~~~~~~~~  228 (296)
T cd06654         151 MDGSVKLTDFGFCAQITPEQS-KRSTMVGTPYWMA-PEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLI  228 (296)
T ss_pred             CCCCEEECccccchhcccccc-ccCcccCCccccC-HHHHcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCHHHhHHHH
Confidence            999999999999876542211 1122467888999 7754      367999999876 4554443332211        


Q ss_pred             ----------CHHHHHHHHHHHHhhcccCcCCCCCHHHHHHH
Q 045577          330 ----------SADELVKCIEVGLLCVQQRIEDWPTMSSVLTM  361 (392)
Q Consensus       330 ----------~~~~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~  361 (392)
                                +......+.+++.+|++.+|++||++.++++.
T Consensus       229 ~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~eil~~  270 (296)
T cd06654         229 ATNGTPELQNPEKLSAIFRDFLNRCLDMDVEKRGSAKELLQH  270 (296)
T ss_pred             hcCCCCCCCCccccCHHHHHHHHHHCcCCcccCcCHHHHhhC
Confidence                      11122356678889999999999999999974

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]

Probab=99.75  E-value=1.1e-18  Score=170.14  Aligned_cols=169  Identities=19%  Similarity=0.174  Sum_probs=130.5

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEc
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLD  264 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~  264 (392)
                      |++.+............++|||++.+|.+...+.+.  ...+..+..++.|++.++.|||+.   +|+|||+||+|+|+.
T Consensus        95 hpniv~l~~~~e~~~~~~lvmEL~~GGeLfd~i~~~--~~sE~da~~~~~~il~av~~lH~~---gvvHrDlKpEN~L~~  169 (382)
T KOG0032|consen   95 HPNIVQLKDAFEDPDSVYLVMELCEGGELFDRIVKK--HYSERDAAGIIRQILEAVKYLHSL---GVVHRDLKPENLLLA  169 (382)
T ss_pred             CCCEEEEEEEEEcCCeEEEEEEecCCchHHHHHHHc--cCCHHHHHHHHHHHHHHHHHHHhC---CceeccCCHHHeeec
Confidence            667777766666667899999999999998877665  244555788999999999999997   999999999999995


Q ss_pred             CC----CCCeEeeeeceEEeCCCCcceeceeeecccccCchhHHH------HHHHhcCCCcceeeccc-ccCCCCCCHH-
Q 045577          265 AE----INPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELLQ------AWKLWSEGDPMEIIDEQ-TKMKGPFSAD-  332 (392)
Q Consensus       265 ~~----~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~~------~~diws~G~v~~~ld~~-~~~~~~~~~~-  332 (392)
                      ..    +.+|++|||++.....  .......+||+.|+| ||+..      ..|+|+.|++.+++-.+ +++.+..... 
T Consensus       170 ~~~~~~~~ik~~DFGla~~~~~--~~~~~~~~Gtp~y~A-PEvl~~~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~~~~~  246 (382)
T KOG0032|consen  170 SKDEGSGRIKLIDFGLAKFIKP--GERLHTIVGTPEYVA-PEVLGGRPYGDEVDVWSIGVILYILLSGVPPFWGETEFEI  246 (382)
T ss_pred             cccCCCCcEEEeeCCCceEccC--CceEeeecCCccccC-chhhcCCCCCcccchhHHHHHHHHHhhCCCCCcCCChhHH
Confidence            43    4799999999998764  445566899999999 77653      67999999988655432 2232222111 


Q ss_pred             ------------------HHHHHHHHHHhhcccCcCCCCCHHHHHHH
Q 045577          333 ------------------ELVKCIEVGLLCVQQRIEDWPTMSSVLTM  361 (392)
Q Consensus       333 ------------------~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~  361 (392)
                                        ....+-+++..++..||..|+++.++++.
T Consensus       247 ~~~i~~~~~~f~~~~w~~is~~akd~i~~ll~~dp~~R~ta~~~L~H  293 (382)
T KOG0032|consen  247 FLAILRGDFDFTSEPWDDISESAKDFIRKLLEFDPRKRLTAAQALQH  293 (382)
T ss_pred             HHHHHcCCCCCCCCCccccCHHHHHHHHHhcccCcccCCCHHHHhcC
Confidence                              12244457779999999999999999984

>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha

Probab=99.75  E-value=1.2e-18  Score=167.78  Aligned_cols=172  Identities=15%  Similarity=0.185  Sum_probs=119.7

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhc-cccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEE
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFEC-SKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLL  263 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~-~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll  263 (392)
                      |++.++.......++..|++|||++++++....+.... ......+..++.|++.||.|||+.   +|+||||||+||++
T Consensus        58 hpniv~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~---~iiH~dlkp~Nil~  134 (327)
T cd08227          58 HPNIVPYRATFIADNELWVVTSFMAYGSAKDLICTHFMDGMSELAIAYILQGVLKALDYIHHM---GYVHRSVKASHILI  134 (327)
T ss_pred             CCCeeeEEEEEEECCEEEEEEeccCCCcHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCChhhEEE
Confidence            55555555444445778999999999998876654322 234555788999999999999998   89999999999999


Q ss_pred             cCCCCCeEeeeeceEEeCCCCc-c-----eeceeeecccccCchhHH--------HHHHHhcCCCcc-eeecccccCCCC
Q 045577          264 DAEINPNISDFGPARIFGDQTE-E-----VTGRVIGTQTLKTVPELL--------QAWKLWSEGDPM-EIIDEQTKMKGP  328 (392)
Q Consensus       264 ~~~~~~kl~DFGla~~~~~~~~-~-----~~~~~~gt~~y~a~~~~~--------~~~diws~G~v~-~~ld~~~~~~~~  328 (392)
                      +.++.++++||+.+........ .     ......++..|+| ||..        ...|+|+.|+++ +++.+...+...
T Consensus       135 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~a-PE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~  213 (327)
T cd08227         135 SVDGKVYLSGLRSNLSMINHGQRLRVVHDFPKYSVKVLPWLS-PEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDM  213 (327)
T ss_pred             ecCCcEEEcccchhhccccccccccccccccccccceecccC-hHHhhcccCCCCchhhHHHHHHHHHHHHHCCCCCCCc
Confidence            9999999999986543321100 0     1112345677999 6654        357999999876 444443222110


Q ss_pred             C-------------------------------------------------------------CHHHHHHHHHHHHhhccc
Q 045577          329 F-------------------------------------------------------------SADELVKCIEVGLLCVQQ  347 (392)
Q Consensus       329 ~-------------------------------------------------------------~~~~~~~~~~i~~~Cl~~  347 (392)
                      .                                                             .......+.+++..|++.
T Consensus       214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~  293 (327)
T cd08227         214 PATQMLLEKLNGTVPCLLDTTTIPAEELTMKPSRSGANSGLGESTTVSTPRPSNGESSSHPYNRTFSPHFHHFVEQCLQR  293 (327)
T ss_pred             chhHHHHHHhcCCccccccccchhhhhcccCCcccCCcCCCCcccccCCcCccccCCcccccccccCHHHHHHHHHHHhh
Confidence            0                                                             000112456788899999


Q ss_pred             CcCCCCCHHHHHH
Q 045577          348 RIEDWPTMSSVLT  360 (392)
Q Consensus       348 dp~~RPsm~eVv~  360 (392)
                      ||++|||+.++++
T Consensus       294 dP~~Rpt~~ell~  306 (327)
T cd08227         294 NPDARPSASTLLN  306 (327)
T ss_pred             CchhcCCHHHHhc
Confidence            9999999999986

Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype

>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

Probab=99.75  E-value=1.6e-18  Score=164.66  Aligned_cols=170  Identities=15%  Similarity=0.233  Sum_probs=124.6

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEc
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLD  264 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~  264 (392)
                      |+++++.......++..|++|||++++++...... . ......+..++.|++.||.|||+.   +++|+||||+||+++
T Consensus        77 hp~i~~~~~~~~~~~~~~iv~e~~~~~~L~~~~~~-~-~~~~~~~~~~~~qi~~~L~~LH~~---~ivH~dl~p~Nill~  151 (297)
T cd06659          77 HQNVVEMYKSYLVGEELWVLMEFLQGGALTDIVSQ-T-RLNEEQIATVCESVLQALCYLHSQ---GVIHRDIKSDSILLT  151 (297)
T ss_pred             CCchhhhhhheeeCCeEEEEEecCCCCCHHHHHhh-c-CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHeEEc
Confidence            56666665555556779999999999888664322 1 234555788999999999999998   899999999999999


Q ss_pred             CCCCCeEeeeeceEEeCCCCcceeceeeecccccCchhHHH------HHHHhcCCCcc-eeecccccCCCCCCHH-----
Q 045577          265 AEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELLQ------AWKLWSEGDPM-EIIDEQTKMKGPFSAD-----  332 (392)
Q Consensus       265 ~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~~------~~diws~G~v~-~~ld~~~~~~~~~~~~-----  332 (392)
                      .++.+||+|||++........ ......|+..|+| ||...      ..|+|+.|+++ +++.+..++......+     
T Consensus       152 ~~~~~kL~dfg~~~~~~~~~~-~~~~~~~~~~y~a-PE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~  229 (297)
T cd06659         152 LDGRVKLSDFGFCAQISKDVP-KRKSLVGTPYWMA-PEVISRTPYGTEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKRL  229 (297)
T ss_pred             cCCcEEEeechhHhhcccccc-cccceecCccccC-HHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH
Confidence            999999999999875542211 1223568899999 77653      57999999876 5555543332211111     


Q ss_pred             -------------HHHHHHHHHHhhcccCcCCCCCHHHHHHH
Q 045577          333 -------------ELVKCIEVGLLCVQQRIEDWPTMSSVLTM  361 (392)
Q Consensus       333 -------------~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~  361 (392)
                                   ....+.+++..|++.+|++||++.++++.
T Consensus       230 ~~~~~~~~~~~~~~~~~l~~~i~~~l~~~P~~Rps~~~ll~~  271 (297)
T cd06659         230 RDSPPPKLKNAHKISPVLRDFLERMLTREPQERATAQELLDH  271 (297)
T ss_pred             hccCCCCccccCCCCHHHHHHHHHHhcCCcccCcCHHHHhhC
Confidence                         11245677889999999999999999984

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i

>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein

Probab=99.75  E-value=2.5e-18  Score=164.20  Aligned_cols=173  Identities=16%  Similarity=0.149  Sum_probs=123.2

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhc-cccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEE
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFEC-SKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLL  263 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~-~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll  263 (392)
                      |+++++.....+.++..|++|||++++++.....+... ......+..++.|++.||.|||++   +|+||||||+||++
T Consensus        58 h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~LH~~---~ivH~dlk~~Nili  134 (314)
T cd08216          58 HPNILPYVTSFIVDSELYVVSPLMAYGSCEDLLKTHFPEGLPELAIAFILKDVLNALDYIHSK---GFIHRSVKASHILL  134 (314)
T ss_pred             CcchhhhhheeecCCeEEEEEeccCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCcceEEE
Confidence            56666655555556788999999999988776554322 234455678999999999999998   89999999999999


Q ss_pred             cCCCCCeEeeeeceEEeCCCC------cceeceeeecccccCchhHH--------HHHHHhcCCCcc-eeecccccCCCC
Q 045577          264 DAEINPNISDFGPARIFGDQT------EEVTGRVIGTQTLKTVPELL--------QAWKLWSEGDPM-EIIDEQTKMKGP  328 (392)
Q Consensus       264 ~~~~~~kl~DFGla~~~~~~~------~~~~~~~~gt~~y~a~~~~~--------~~~diws~G~v~-~~ld~~~~~~~~  328 (392)
                      +.++.+|++|||.+.......      ........++..|+| ||+.        .+.|+|+.|+++ +++.+..++...
T Consensus       135 ~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~a-PE~~~~~~~~~~~~~Diws~G~il~el~~g~~pf~~~  213 (314)
T cd08216         135 SGDGKVVLSGLRYSVSMIKHGKRQRVVHDFPKSSVKNLPWLS-PEVLQQNLQGYNEKSDIYSVGITACELANGHVPFKDM  213 (314)
T ss_pred             ecCCceEEecCccceeeccccccccccccccccccccccccC-HHHhcCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCC
Confidence            999999999999887653111      111122456778999 6654        357999999876 444443332211


Q ss_pred             CCH-------------------------------------------------HHHHHHHHHHHhhcccCcCCCCCHHHHH
Q 045577          329 FSA-------------------------------------------------DELVKCIEVGLLCVQQRIEDWPTMSSVL  359 (392)
Q Consensus       329 ~~~-------------------------------------------------~~~~~~~~i~~~Cl~~dp~~RPsm~eVv  359 (392)
                      ...                                                 .....+.+++..|++.+|++||++.+++
T Consensus       214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll  293 (314)
T cd08216         214 PATQMLLEKVRGTVPCLLDKSTYPLYEDSMSQSRSSNEHPNNRDSVDHPYTRTFSEHFHQFVELCLQRDPESRPSASQLL  293 (314)
T ss_pred             CHHHHHHHHHhccCccccccCchhhhcCCcCcccccccccchhhhhhcchhhHHHHHHHHHHHHHhhcCCCcCcCHHHHh
Confidence            100                                                 0112456788899999999999999988


Q ss_pred             HH
Q 045577          360 TM  361 (392)
Q Consensus       360 ~~  361 (392)
                      +.
T Consensus       294 ~~  295 (314)
T cd08216         294 NH  295 (314)
T ss_pred             cC
Confidence            64

Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc

>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase

Probab=99.75  E-value=1.7e-18  Score=162.33  Aligned_cols=168  Identities=19%  Similarity=0.235  Sum_probs=118.8

Q ss_pred             CCCccccccCcCCC--CCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeE
Q 045577          185 SGGCKRNWEADCGD--GEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVL  262 (392)
Q Consensus       185 s~GCvR~~~l~C~~--~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIl  262 (392)
                      |++.++.....+.+  +..+++|||+++ ++....+.......+..+..++.|++.||.|||+.   +++||||||+||+
T Consensus        57 h~~i~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH~~---~i~H~dl~p~ni~  132 (282)
T cd07831          57 HPNILRLIEVLFDRKTGRLALVFELMDM-NLYELIKGRKRPLPEKRVKSYMYQLLKSLDHMHRN---GIFHRDIKPENIL  132 (282)
T ss_pred             CCCccceEEEEecCCCCcEEEEEecCCc-cHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC---CceecccCHHHEE
Confidence            44444444443333  678999999985 55444443332335555888999999999999998   8999999999999


Q ss_pred             EcCCCCCeEeeeeceEEeCCCCcceeceeeecccccCchhHH-------HHHHHhcCCCcc-eeecccccCCCCCCH---
Q 045577          263 LDAEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELL-------QAWKLWSEGDPM-EIIDEQTKMKGPFSA---  331 (392)
Q Consensus       263 l~~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~-------~~~diws~G~v~-~~ld~~~~~~~~~~~---  331 (392)
                      ++. +.+||+|||+++.......  .....++..|++ ||..       .+.|+|+.|+++ +++.+.+.+.+....   
T Consensus       133 l~~-~~~kl~dfg~~~~~~~~~~--~~~~~~~~~y~a-PE~~~~~~~~~~~~Di~slGv~l~el~~~~~p~~~~~~~~~~  208 (282)
T cd07831         133 IKD-DILKLADFGSCRGIYSKPP--YTEYISTRWYRA-PECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPGTNELDQI  208 (282)
T ss_pred             EcC-CCeEEEecccccccccCCC--cCCCCCCcccCC-hhHhhcCCCCCcchhHHHHHHHHHHHHcCCcCCCCCCHHHHH
Confidence            999 9999999999986542211  122457788998 6643       368999999876 454443333221100   


Q ss_pred             -----------------------------------------HHHHHHHHHHHhhcccCcCCCCCHHHHHH
Q 045577          332 -----------------------------------------DELVKCIEVGLLCVQQRIEDWPTMSSVLT  360 (392)
Q Consensus       332 -----------------------------------------~~~~~~~~i~~~Cl~~dp~~RPsm~eVv~  360 (392)
                                                               .....+.+++..|++.+|++||++.++++
T Consensus       209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~  278 (282)
T cd07831         209 AKIHDVLGTPDAEVLKKFRKSRHMNYNFPSKKGTGLRKLLPNASAEGLDLLKKLLAYDPDERITAKQALR  278 (282)
T ss_pred             HHHHHHcCCCCHHHHHhhcccccccccCcccccccHHHHcccccHHHHHHHHHHhccCcccccCHHHHhh
Confidence                                                     11246778888999999999999999875

Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.

>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3

Probab=99.75  E-value=3.4e-18  Score=159.65  Aligned_cols=161  Identities=20%  Similarity=0.207  Sum_probs=115.0

Q ss_pred             eeEEecCccCCCcChhhhhhh-----ccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEcCCCCCeEeeee
Q 045577          201 VFLMFEGIKLPDKSEFTCEFE-----CSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEINPNISDFG  275 (392)
Q Consensus       201 ~~lv~e~~~~~~l~~~~~~~~-----~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~~~~~~kl~DFG  275 (392)
                      .++++||+.++++........     .......+.+++.|++.||.|||+.   +|+||||||+||+++.++.+|++|||
T Consensus        82 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~nili~~~~~~kl~dfg  158 (273)
T cd05074          82 PMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSSK---NFIHRDLAARNCMLNENMTVCVADFG  158 (273)
T ss_pred             eEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CEeecccchhhEEEcCCCCEEECccc
Confidence            478899999998865432211     1123445788999999999999998   89999999999999999999999999


Q ss_pred             ceEEeCCCCc-ceeceeeecccccCchhHH------HHHHHhcCCCcc-eeec-ccccCCCCCC----------------
Q 045577          276 PARIFGDQTE-EVTGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIID-EQTKMKGPFS----------------  330 (392)
Q Consensus       276 la~~~~~~~~-~~~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld-~~~~~~~~~~----------------  330 (392)
                      +++....... .......++..|++ |+..      ...|+|++|+++ +++. +.+.+.....                
T Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~-pe~~~~~~~~~~sDi~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~  237 (273)
T cd05074         159 LSKKIYSGDYYRQGCASKLPVKWLA-LESLADNVYTTHSDVWAFGVTMWEIMTRGQTPYAGVENSEIYNYLIKGNRLKQP  237 (273)
T ss_pred             ccccccCCcceecCCCccCchhhcC-HhHHhcCccchhhhhHHHHHHHHHHhhCCCCCCCCCCHHHHHHHHHcCCcCCCC
Confidence            9886542111 11112334567777 5543      368999999877 4443 3222221111                


Q ss_pred             HHHHHHHHHHHHhhcccCcCCCCCHHHHHHHHccC
Q 045577          331 ADELVKCIEVGLLCVQQRIEDWPTMSSVLTMLSNE  365 (392)
Q Consensus       331 ~~~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~L~~~  365 (392)
                      ......+.+++.+|++.+|++||++.++++.|++.
T Consensus       238 ~~~~~~~~~l~~~~l~~~p~~Rps~~~~~~~l~~~  272 (273)
T cd05074         238 PDCLEDVYELMCQCWSPEPKCRPSFQHLRDQLELI  272 (273)
T ss_pred             CCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence            11224677899999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac

>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

Probab=99.74  E-value=1.2e-18  Score=161.31  Aligned_cols=171  Identities=17%  Similarity=0.192  Sum_probs=121.4

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEc
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLD  264 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~  264 (392)
                      |++.++.......++..|++|||+.++++........-......+..++.|++.||.|||+.   +++|+||||+||+++
T Consensus        59 h~~i~~~~~~~~~~~~~~l~~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~---~i~h~dl~p~ni~i~  135 (262)
T cd06613          59 HPNIVAYFGSYLRRDKLWIVMEYCGGGSLQDIYQVTRGPLSELQIAYVCRETLKGLAYLHET---GKIHRDIKGANILLT  135 (262)
T ss_pred             CCChhceEEEEEeCCEEEEEEeCCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhC---CceecCCChhhEEEC
Confidence            44444443333345678999999999998775544322234555788999999999999998   899999999999999


Q ss_pred             CCCCCeEeeeeceEEeCCCCcceeceeeecccccCchhHH---------HHHHHhcCCCcc-eeecccccCCCCC-----
Q 045577          265 AEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELL---------QAWKLWSEGDPM-EIIDEQTKMKGPF-----  329 (392)
Q Consensus       265 ~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~---------~~~diws~G~v~-~~ld~~~~~~~~~-----  329 (392)
                      .++.+||+|||++........ ......++..|++ ||..         ...|+|+.|+++ +++.+.+++....     
T Consensus       136 ~~~~~~l~d~g~~~~~~~~~~-~~~~~~~~~~y~~-Pe~~~~~~~~~~~~~~Di~slG~~l~~~~tg~~p~~~~~~~~~~  213 (262)
T cd06613         136 EDGDVKLADFGVSAQLTATIA-KRKSFIGTPYWMA-PEVAAVERKGGYDGKCDIWALGITAIELAELQPPMFDLHPMRAL  213 (262)
T ss_pred             CCCCEEECccccchhhhhhhh-ccccccCCccccC-chhhcccccCCcCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHH
Confidence            999999999999876542111 1122457778888 5543         247999999866 5555533332211     


Q ss_pred             ---------------CHHHHHHHHHHHHhhcccCcCCCCCHHHHHH
Q 045577          330 ---------------SADELVKCIEVGLLCVQQRIEDWPTMSSVLT  360 (392)
Q Consensus       330 ---------------~~~~~~~~~~i~~~Cl~~dp~~RPsm~eVv~  360 (392)
                                     .......+.+++.+|++.+|.+||++.+|+.
T Consensus       214 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~  259 (262)
T cd06613         214 FLISKSNFPPPKLKDKEKWSPVFHDFIKKCLTKDPKKRPTATKLLQ  259 (262)
T ss_pred             HHHHhccCCCccccchhhhhHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence                           1111245678888999999999999999875

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ

>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

Probab=99.74  E-value=2.4e-18  Score=163.07  Aligned_cols=170  Identities=17%  Similarity=0.232  Sum_probs=121.8

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEc
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLD  264 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~  264 (392)
                      |++-++.....+.++..|++|||++++++.......  ......+..++.||+.||.|||+.   +++||||||+||+++
T Consensus        78 h~~ii~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~--~l~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~Nill~  152 (292)
T cd06658          78 HENVVDMYNSYLVGDELWVVMEFLEGGALTDIVTHT--RMNEEQIATVCLSVLRALSYLHNQ---GVIHRDIKSDSILLT  152 (292)
T ss_pred             CCcHHHHHHheecCCeEEEEEeCCCCCcHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CEeecCCCHHHEEEc
Confidence            444444444444457789999999998887654221  234445788999999999999998   899999999999999


Q ss_pred             CCCCCeEeeeeceEEeCCCCcceeceeeecccccCchhHH------HHHHHhcCCCcc-eeecccccCCCCCCHH-----
Q 045577          265 AEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIIDEQTKMKGPFSAD-----  332 (392)
Q Consensus       265 ~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld~~~~~~~~~~~~-----  332 (392)
                      .++.+||+|||++........ ......|+..|+| ||..      .+.|+|+.|+++ +++.+...+.......     
T Consensus       153 ~~~~~kL~dfg~~~~~~~~~~-~~~~~~~~~~y~a-PE~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~  230 (292)
T cd06658         153 SDGRIKLSDFGFCAQVSKEVP-KRKSLVGTPYWMA-PEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQAMRRI  230 (292)
T ss_pred             CCCCEEEccCcchhhcccccc-cCceeecCccccC-HHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH
Confidence            999999999999876542221 1223568889999 7754      468999999766 5555433332211111     


Q ss_pred             -------------HHHHHHHHHHhhcccCcCCCCCHHHHHHH
Q 045577          333 -------------ELVKCIEVGLLCVQQRIEDWPTMSSVLTM  361 (392)
Q Consensus       333 -------------~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~  361 (392)
                                   ....+..++..|++.+|.+||++.++++.
T Consensus       231 ~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~  272 (292)
T cd06658         231 RDNLPPRVKDSHKVSSVLRGFLDLMLVREPSQRATAQELLQH  272 (292)
T ss_pred             HhcCCCccccccccCHHHHHHHHHHccCChhHCcCHHHHhhC
Confidence                         11234567779999999999999999975

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express

>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

Probab=99.74  E-value=2.6e-18  Score=160.17  Aligned_cols=171  Identities=19%  Similarity=0.237  Sum_probs=120.1

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhccc--cchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeE
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSK--YSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVL  262 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~~--~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIl  262 (392)
                      |++.++.......++..++++||++++++...........  ....+..++.|++.||.|||+.   +|+||||||+||+
T Consensus        64 h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~h~dl~p~nil  140 (268)
T cd06624          64 HRNIVQYLGSDSENGFFKIFMEQVPGGSLSALLRSKWGPLKDNEQTIIFYTKQILEGLKYLHDN---QIVHRDIKGDNVL  140 (268)
T ss_pred             CCCeeeeeeeeccCCEEEEEEecCCCCCHHHHHHHhcccCCCcHHHHHHHHHHHHHHHHHHHHC---CEeecCCCHHHEE
Confidence            4444444443334567899999999999987655433222  4455677899999999999998   8999999999999


Q ss_pred             EcC-CCCCeEeeeeceEEeCCCCcceeceeeecccccCchhHH--------HHHHHhcCCCcc-eeecccccCCCC----
Q 045577          263 LDA-EINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELL--------QAWKLWSEGDPM-EIIDEQTKMKGP----  328 (392)
Q Consensus       263 l~~-~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~--------~~~diws~G~v~-~~ld~~~~~~~~----  328 (392)
                      ++. ++.+||+|||++........ ......|+..|++ ||..        ...|+|+.|+++ +++.+..++...    
T Consensus       141 ~~~~~~~~~l~dfg~~~~~~~~~~-~~~~~~~~~~~~a-PE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~~p~~~~~~~~  218 (268)
T cd06624         141 VNTYSGVVKISDFGTSKRLAGINP-CTETFTGTLQYMA-PEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIELGEPQ  218 (268)
T ss_pred             EcCCCCeEEEecchhheecccCCC-ccccCCCCccccC-hhhhccccccCCchhhhHHHHHHHHHHHhCCCCCccccChh
Confidence            976 67899999999876542211 1222457888999 6643        367999999866 444443222111    


Q ss_pred             --------------CCHHHHHHHHHHHHhhcccCcCCCCCHHHHHH
Q 045577          329 --------------FSADELVKCIEVGLLCVQQRIEDWPTMSSVLT  360 (392)
Q Consensus       329 --------------~~~~~~~~~~~i~~~Cl~~dp~~RPsm~eVv~  360 (392)
                                    .+......+.+++.+|++.+|++||++.++++
T Consensus       219 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~  264 (268)
T cd06624         219 AAMFKVGMFKIHPEIPESLSAEAKNFILRCFEPDPDKRASAHDLLQ  264 (268)
T ss_pred             hhHhhhhhhccCCCCCcccCHHHHHHHHHHcCCCchhCCCHHHHHh
Confidence                          11112235667888999999999999999875

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina

>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases

Probab=99.74  E-value=2.9e-18  Score=161.76  Aligned_cols=158  Identities=16%  Similarity=0.101  Sum_probs=117.0

Q ss_pred             CCCeeEEecCccCCCcChhhhhhh-ccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEcCCCCCeEeeeec
Q 045577          198 DGEVFLMFEGIKLPDKSEFTCEFE-CSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEINPNISDFGP  276 (392)
Q Consensus       198 ~~~~~lv~e~~~~~~l~~~~~~~~-~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~~~~~~kl~DFGl  276 (392)
                      +...+++|||++++++........ ....+..+..++.|++.||.|||+.   +++||||||+||++++++.++|+|||+
T Consensus        72 ~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~~l~Dfg~  148 (285)
T cd05605          72 KDALCLVLTLMNGGDLKFHIYNMGNPGFDEERAVFYAAEITCGLEDLHRE---RIVYRDLKPENILLDDYGHIRISDLGL  148 (285)
T ss_pred             CCeEEEEEeccCCCcHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHHC---CcEecCCCHHHEEECCCCCEEEeeCCC
Confidence            456899999999999876544322 2235555788999999999999998   899999999999999999999999999


Q ss_pred             eEEeCCCCcceeceeeecccccCchhHH------HHHHHhcCCCcc-eeecccccCCCCCC-------------------
Q 045577          277 ARIFGDQTEEVTGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIIDEQTKMKGPFS-------------------  330 (392)
Q Consensus       277 a~~~~~~~~~~~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld~~~~~~~~~~-------------------  330 (392)
                      +.......  ......|+..|++ ||..      ...|+|+.|+++ +++.+...+.+...                   
T Consensus       149 ~~~~~~~~--~~~~~~~~~~y~a-PE~~~~~~~~~~~Diws~G~~l~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~  225 (285)
T cd05605         149 AVEIPEGE--TIRGRVGTVGYMA-PEVVKNERYTFSPDWWGLGCLIYEMIEGKSPFRQRKEKVKREEVERRVKEDQEEYS  225 (285)
T ss_pred             ceecCCCC--ccccccCCCCccC-cHHhcCCCCCccccchhHHHHHHHHHHCCCCCCCCchhhHHHHHHHHhhhcccccC
Confidence            98754221  1123468899999 6654      357999999876 55555444332211                   


Q ss_pred             HHHHHHHHHHHHhhcccCcCCCC-----CHHHHHHH
Q 045577          331 ADELVKCIEVGLLCVQQRIEDWP-----TMSSVLTM  361 (392)
Q Consensus       331 ~~~~~~~~~i~~~Cl~~dp~~RP-----sm~eVv~~  361 (392)
                      ......+.+++..|++.||++||     ++.++++.
T Consensus       226 ~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~  261 (285)
T cd05605         226 EKFSEAARSICRQLLTKDPGFRLGCRGEGAEEVKAH  261 (285)
T ss_pred             cccCHHHHHHHHHHccCCHHHhcCCCCCCHHHHhcC
Confidence            11123456788899999999999     77787553

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,

>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases

Probab=99.74  E-value=3.5e-18  Score=161.29  Aligned_cols=170  Identities=18%  Similarity=0.258  Sum_probs=116.4

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEc
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLD  264 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~  264 (392)
                      |++.++.......+...|+||||+.+ ++.....+.........+..++.|++.||.|||+.   +++||||||+||+++
T Consensus        62 h~~i~~~~~~~~~~~~~~lv~e~~~~-~L~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~---~i~H~dl~p~nil~~  137 (291)
T cd07844          62 HANIVTLHDIIHTKKTLTLVFEYLDT-DLKQYMDDCGGGLSMHNVRLFLFQLLRGLAYCHQR---RVLHRDLKPQNLLIS  137 (291)
T ss_pred             CcceeeEEEEEecCCeEEEEEecCCC-CHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecccCCHHHEEEc
Confidence            34444444444445678999999985 66554433322234455788899999999999998   899999999999999


Q ss_pred             CCCCCeEeeeeceEEeCCCCcceeceeeecccccCchhHH-------HHHHHhcCCCcc-eeecccccCCCCCC-HH---
Q 045577          265 AEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELL-------QAWKLWSEGDPM-EIIDEQTKMKGPFS-AD---  332 (392)
Q Consensus       265 ~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~-------~~~diws~G~v~-~~ld~~~~~~~~~~-~~---  332 (392)
                      .++.+||+|||+++......... ....++..|+| ||..       ...|+|+.|+++ +++.+...+..... .+   
T Consensus       138 ~~~~~kl~dfg~~~~~~~~~~~~-~~~~~~~~~~a-PE~~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~  215 (291)
T cd07844         138 ERGELKLADFGLARAKSVPSKTY-SNEVVTLWYRP-PDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLFPGSTDVEDQLH  215 (291)
T ss_pred             CCCCEEECccccccccCCCCccc-cccccccccCC-cHHhhcCcccCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHH
Confidence            99999999999987543211111 12345778888 6643       257999999876 44444333321110 00   


Q ss_pred             --------------------------------------------HHHHHHHHHHhhcccCcCCCCCHHHHHH
Q 045577          333 --------------------------------------------ELVKCIEVGLLCVQQRIEDWPTMSSVLT  360 (392)
Q Consensus       333 --------------------------------------------~~~~~~~i~~~Cl~~dp~~RPsm~eVv~  360 (392)
                                                                  ....+.+++..|++.+|++||++.++++
T Consensus       216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~p~~Rps~~e~l~  287 (291)
T cd07844         216 KIFRVLGTPTEETWPGVSSNPEFKPYSFPFYPPRPLINHAPRLDRIPHGEELALKFLQYEPKKRISAAEAMK  287 (291)
T ss_pred             HHHHhcCCCChhhhhhhhhccccccccccccCChhHHHhCcCCCCchhHHHHHHHHhccCcccccCHHHHhc
Confidence                                                        0134557888999999999999998875

Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the

>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

Probab=99.74  E-value=2e-18  Score=163.83  Aligned_cols=170  Identities=16%  Similarity=0.233  Sum_probs=123.6

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEc
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLD  264 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~  264 (392)
                      |++.++.......+...|+++||++++++.......  ......+..++.|++.||.|||+.   +++|+||||+||+++
T Consensus        75 h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~--~l~~~~~~~i~~~l~~al~~LH~~---~i~H~dL~p~Nili~  149 (296)
T cd06655          75 NPNIVNFLDSFLVGDELFVVMEYLAGGSLTDVVTET--CMDEAQIAAVCRECLQALEFLHAN---QVIHRDIKSDNVLLG  149 (296)
T ss_pred             CCceeeeeeeEecCceEEEEEEecCCCcHHHHHHhc--CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEC
Confidence            455555554444456799999999999987754332  234556889999999999999998   899999999999999


Q ss_pred             CCCCCeEeeeeceEEeCCCCcceeceeeecccccCchhHH------HHHHHhcCCCcc-eeecccccCCCCCCH------
Q 045577          265 AEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIIDEQTKMKGPFSA------  331 (392)
Q Consensus       265 ~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld~~~~~~~~~~~------  331 (392)
                      .++.+||+|||++........ ......++..|++ ||..      ...|+|+.|+++ +++.+..++......      
T Consensus       150 ~~~~~kl~dfg~~~~~~~~~~-~~~~~~~~~~y~a-PE~~~~~~~~~~~Dv~slGvil~~lltg~~pf~~~~~~~~~~~~  227 (296)
T cd06655         150 MDGSVKLTDFGFCAQITPEQS-KRSTMVGTPYWMA-PEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLI  227 (296)
T ss_pred             CCCCEEEccCccchhcccccc-cCCCcCCCccccC-cchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH
Confidence            999999999999876542221 1223467888999 6643      368999999876 444443333222111      


Q ss_pred             ------------HHHHHHHHHHHhhcccCcCCCCCHHHHHHH
Q 045577          332 ------------DELVKCIEVGLLCVQQRIEDWPTMSSVLTM  361 (392)
Q Consensus       332 ------------~~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~  361 (392)
                                  .....+.+++.+|++.+|++||++.+|++.
T Consensus       228 ~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~il~~  269 (296)
T cd06655         228 ATNGTPELQNPEKLSPIFRDFLNRCLEMDVEKRGSAKELLQH  269 (296)
T ss_pred             HhcCCcccCCcccCCHHHHHHHHHHhhcChhhCCCHHHHhhC
Confidence                        112245567789999999999999999864

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

Probab=99.74  E-value=2.5e-18  Score=160.04  Aligned_cols=171  Identities=18%  Similarity=0.251  Sum_probs=120.7

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEc
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLD  264 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~  264 (392)
                      |++.++........+..+++|||++++++.....+.. ......+..++.|++.||.|||+.   +++||||+|+||+++
T Consensus        65 h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~l~~~~~~~~~~~l~~~l~~lH~~---~ivH~di~p~nil~~  140 (267)
T cd06628          65 HENIVQYLGSSLDADHLNIFLEYVPGGSVAALLNNYG-AFEETLVRNFVRQILKGLNYLHNR---GIIHRDIKGANILVD  140 (267)
T ss_pred             CCCeeeEEEEEEeCCccEEEEEecCCCCHHHHHHhcc-CccHHHHHHHHHHHHHHHHHHHhc---CcccccCCHHHEEEc
Confidence            4444444444444567899999999988876554332 224444778999999999999998   899999999999999


Q ss_pred             CCCCCeEeeeeceEEeCCCCc-----ceeceeeecccccCchhHH------HHHHHhcCCCcc-eeecccccCCCC----
Q 045577          265 AEINPNISDFGPARIFGDQTE-----EVTGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIIDEQTKMKGP----  328 (392)
Q Consensus       265 ~~~~~kl~DFGla~~~~~~~~-----~~~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld~~~~~~~~----  328 (392)
                      .++.+||+|||+++.......     .......|+..|++ ||..      ...|+|+.|+++ +++.+..++...    
T Consensus       141 ~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~y~~-pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~  219 (267)
T cd06628         141 NKGGIKISDFGISKKLEANSLSTKTNGARPSLQGSVFWMA-PEVVKQTSYTRKADIWSLGCLVVEMLTGKHPFPDCTQLQ  219 (267)
T ss_pred             CCCCEEecccCCCcccccccccCCccccccccCCCcCccC-hhHhccCCCCchhhhHHHHHHHHHHhhCCCCCCCccHHH
Confidence            999999999999886641110     11112457788999 6654      367999999876 444443332211    


Q ss_pred             ------------CCHHHHHHHHHHHHhhcccCcCCCCCHHHHHH
Q 045577          329 ------------FSADELVKCIEVGLLCVQQRIEDWPTMSSVLT  360 (392)
Q Consensus       329 ------------~~~~~~~~~~~i~~~Cl~~dp~~RPsm~eVv~  360 (392)
                                  .+......+.+++.+|++.+|++||++.+|++
T Consensus       220 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~  263 (267)
T cd06628         220 AIFKIGENASPEIPSNISSEAIDFLEKTFEIDHNKRPTAAELLK  263 (267)
T ss_pred             HHHHHhccCCCcCCcccCHHHHHHHHHHccCCchhCcCHHHHhh
Confidence                        11112235566778999999999999999875

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate

>PLN00009 cyclin-dependent kinase A; Provisional

Probab=99.74  E-value=4.1e-18  Score=161.12  Aligned_cols=171  Identities=23%  Similarity=0.331  Sum_probs=117.2

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhh-ccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEE
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFE-CSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLL  263 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~-~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll  263 (392)
                      |++.++.....+.+...|++|||+++ ++........ .......+..++.||+.||.|||++   +++|+||||+||++
T Consensus        60 h~~i~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~i~H~dl~p~nill  135 (294)
T PLN00009         60 HGNIVRLQDVVHSEKRLYLVFEYLDL-DLKKHMDSSPDFAKNPRLIKTYLYQILRGIAYCHSH---RVLHRDLKPQNLLI  135 (294)
T ss_pred             CCCEeeEEEEEecCCeEEEEEecccc-cHHHHHHhCCCCCcCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCcceEEE
Confidence            45555555554556789999999975 4433332222 1123444678899999999999998   89999999999999


Q ss_pred             cC-CCCCeEeeeeceEEeCCCCcceeceeeecccccCchhHH-------HHHHHhcCCCcc-eeecccccCCCCCCHH--
Q 045577          264 DA-EINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELL-------QAWKLWSEGDPM-EIIDEQTKMKGPFSAD--  332 (392)
Q Consensus       264 ~~-~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~-------~~~diws~G~v~-~~ld~~~~~~~~~~~~--  332 (392)
                      +. ++.+||+|||++........ ......+++.|++ ||..       ...|+|+.|+++ +++.+.+.+......+  
T Consensus       136 ~~~~~~~kl~dfg~~~~~~~~~~-~~~~~~~~~~y~~-PE~~~~~~~~~~~~Dv~slG~i~~~l~tg~~pf~~~~~~~~~  213 (294)
T PLN00009        136 DRRTNALKLADFGLARAFGIPVR-TFTHEVVTLWYRA-PEILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFPGDSEIDEL  213 (294)
T ss_pred             ECCCCEEEEcccccccccCCCcc-ccccCceeecccC-HHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHH
Confidence            85 45689999999976542211 1122456788999 6654       268999999876 5555544332221111  


Q ss_pred             ------------------------------------------HHHHHHHHHHhhcccCcCCCCCHHHHHHH
Q 045577          333 ------------------------------------------ELVKCIEVGLLCVQQRIEDWPTMSSVLTM  361 (392)
Q Consensus       333 ------------------------------------------~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~  361 (392)
                                                                ....+.+++.+|++.+|++||++.++++.
T Consensus       214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~~l~~  284 (294)
T PLN00009        214 FKIFRILGTPNEETWPGVTSLPDYKSAFPKWPPKDLATVVPTLEPAGVDLLSKMLRLDPSKRITARAALEH  284 (294)
T ss_pred             HHHHHHhCCCChhhccccccchhhhhhcccCCCCCHHHhCcCCChHHHHHHHHHccCChhhCcCHHHHhcC
Confidence                                                      11345678889999999999999999863

>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity

Probab=99.74  E-value=1.1e-18  Score=161.43  Aligned_cols=170  Identities=21%  Similarity=0.297  Sum_probs=125.8

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEc
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLD  264 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~  264 (392)
                      |++.++.......+...+++||+++++++...... ........+..++.|+++||.|||+.   +++|+||||+||+++
T Consensus        57 ~~~i~~~~~~~~~~~~~~~v~~~~~~~~L~~~l~~-~~~~~~~~~~~~~~qi~~~L~~Lh~~---~i~H~dikp~NIl~~  132 (260)
T PF00069_consen   57 HPNIVQILDVFQDDNYLYIVMEYCPGGSLQDYLQK-NKPLSEEEILKIAYQILEALAYLHSK---GIVHRDIKPENILLD  132 (260)
T ss_dssp             BTTBCHEEEEEEESSEEEEEEEEETTEBHHHHHHH-HSSBBHHHHHHHHHHHHHHHHHHHHT---TEEESSBSGGGEEES
T ss_pred             ccccccccccccccccccccccccccccccccccc-cccccccccccccccccccccccccc---ccccccccccccccc
Confidence            55555555444446778999999999888765442 23335555889999999999999998   899999999999999


Q ss_pred             CCCCCeEeeeeceEEeCCCCcceeceeeecccccCchhHHH-------HHHHhcCCCcc-eeecccccCCCCCCHHH---
Q 045577          265 AEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELLQ-------AWKLWSEGDPM-EIIDEQTKMKGPFSADE---  333 (392)
Q Consensus       265 ~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~~-------~~diws~G~v~-~~ld~~~~~~~~~~~~~---  333 (392)
                      .++.++|+|||.+.... ..........++..|+| ||...       ..|+|+.|+++ +++.+...+......+.   
T Consensus       133 ~~~~~~l~Dfg~~~~~~-~~~~~~~~~~~~~~y~a-PE~~~~~~~~~~~~Di~slG~il~~l~~~~~p~~~~~~~~~~~~  210 (260)
T PF00069_consen  133 ENGEVKLIDFGSSVKLS-ENNENFNPFVGTPEYMA-PEVLQQGKKYTRKSDIWSLGIILYELLTGKLPFEESNSDDQLEI  210 (260)
T ss_dssp             TTSEEEESSGTTTEEST-STTSEBSSSSSSGGGSC-HHHHTTTSSBSTHHHHHHHHHHHHHHHHSSSSSTTSSHHHHHHH
T ss_pred             ccccccccccccccccc-ccccccccccccccccc-cccccccccccccccccccccccccccccccccccccchhhhhh
Confidence            99999999999998752 22233344678889999 67653       77999999877 55555333332200000   


Q ss_pred             -------------------HHHHHHHHHhhcccCcCCCCCHHHHHH
Q 045577          334 -------------------LVKCIEVGLLCVQQRIEDWPTMSSVLT  360 (392)
Q Consensus       334 -------------------~~~~~~i~~~Cl~~dp~~RPsm~eVv~  360 (392)
                                         ...+.+++..|++.+|++||++.++++
T Consensus       211 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~R~~~~~l~~  256 (260)
T PF00069_consen  211 IEKILKRPLPSSSQQSREKSEELRDLIKKMLSKDPEQRPSAEELLK  256 (260)
T ss_dssp             HHHHHHTHHHHHTTSHTTSHHHHHHHHHHHSSSSGGGSTTHHHHHT
T ss_pred             hhhcccccccccccccchhHHHHHHHHHHHccCChhHCcCHHHHhc
Confidence                               146677888999999999999999875

Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....

>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase

Probab=99.74  E-value=5.4e-18  Score=156.78  Aligned_cols=158  Identities=16%  Similarity=0.208  Sum_probs=115.3

Q ss_pred             CCeeEEecCccCCCcChhhhhhhc-cccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEcCCCCCeEeeeece
Q 045577          199 GEVFLMFEGIKLPDKSEFTCEFEC-SKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEINPNISDFGPA  277 (392)
Q Consensus       199 ~~~~lv~e~~~~~~l~~~~~~~~~-~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~~~~~~kl~DFGla  277 (392)
                      +..+++|||++++++......... ......+..++.|++.||.|||+.   +++||||||+||+++.++.+||+|||++
T Consensus        71 ~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~~~H~dl~p~nili~~~~~~kl~Dfg~~  147 (254)
T cd05083          71 NGLYIVMELMSKGNLVNFLRTRGRALVSVIQLLQFSLDVAEGMEYLESK---KLVHRDLAARNILVSEDGVAKVSDFGLA  147 (254)
T ss_pred             CCcEEEEECCCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccccCcceEEEcCCCcEEECCCccc
Confidence            457999999999998765543322 224555788999999999999998   8999999999999999999999999998


Q ss_pred             EEeCCCCcceeceeeecccccCchhHH------HHHHHhcCCCcc-eeec-ccccCCCCCC----------------HHH
Q 045577          278 RIFGDQTEEVTGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIID-EQTKMKGPFS----------------ADE  333 (392)
Q Consensus       278 ~~~~~~~~~~~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld-~~~~~~~~~~----------------~~~  333 (392)
                      .......    .....+..|++ ||..      ...|+|+.|+++ +++. +.+++.....                ...
T Consensus       148 ~~~~~~~----~~~~~~~~y~~-pe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~  222 (254)
T cd05083         148 RVGSMGV----DNSKLPVKWTA-PEALKHKKFSSKSDVWSYGVLLWEVFSYGRAPYPKMSLKEVKECVEKGYRMEPPEGC  222 (254)
T ss_pred             eeccccC----CCCCCCceecC-HHHhccCCcCchhhHHHHHHHHHHHHhCCCCCCccCCHHHHHHHHhCCCCCCCCCcC
Confidence            7643211    11223456888 5544      367999999876 4443 3322221111                111


Q ss_pred             HHHHHHHHHhhcccCcCCCCCHHHHHHHHcc
Q 045577          334 LVKCIEVGLLCVQQRIEDWPTMSSVLTMLSN  364 (392)
Q Consensus       334 ~~~~~~i~~~Cl~~dp~~RPsm~eVv~~L~~  364 (392)
                      ...+.+++.+|++.+|++||++.++++.|+.
T Consensus       223 ~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~  253 (254)
T cd05083         223 PADVYVLMTSCWETEPKKRPSFHKLREKLEK  253 (254)
T ss_pred             CHHHHHHHHHHcCCChhhCcCHHHHHHHHcc
Confidence            2356678889999999999999999999875

Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki

>PRK13184 pknD serine/threonine-protein kinase; Reviewed

Probab=99.74  E-value=2.5e-18  Score=181.48  Aligned_cols=177  Identities=15%  Similarity=0.164  Sum_probs=124.5

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhh-hc---------cccchhhhhHHHHHHHhhhhcCcCCCCceeec
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEF-EC---------SKYSSYVTNILYGIARVILYLPEDSRLEIIHR  254 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~-~~---------~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHr  254 (392)
                      |++.++.......++..|++|||++++++....... .+         ......+++++.||++||.|||+.   +|+||
T Consensus        61 HPNIVkl~~v~~d~~~lyLVMEY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs~---GIIHR  137 (932)
T PRK13184         61 HPGIVPVYSICSDGDPVYYTMPYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHSK---GVLHR  137 (932)
T ss_pred             CcCcCeEEEEEeeCCEEEEEEEcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHHC---Ccccc
Confidence            555555544444456789999999999987643221 01         012233578899999999999998   89999


Q ss_pred             ccccceeEEcCCCCCeEeeeeceEEeCCCC-----------------cceeceeeecccccCchhHH------HHHHHhc
Q 045577          255 DHKTSNVLLDAEINPNISDFGPARIFGDQT-----------------EEVTGRVIGTQTLKTVPELL------QAWKLWS  311 (392)
Q Consensus       255 DlKp~NIll~~~~~~kl~DFGla~~~~~~~-----------------~~~~~~~~gt~~y~a~~~~~------~~~diws  311 (392)
                      ||||+||+++.++.+||+|||+++......                 ........||+.||| ||..      .+.|+|+
T Consensus       138 DLKPeNILLd~dg~vKLiDFGLAk~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmA-PE~l~g~~~S~kSDIWS  216 (932)
T PRK13184        138 DLKPDNILLGLFGEVVILDWGAAIFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMA-PERLLGVPASESTDIYA  216 (932)
T ss_pred             CCchheEEEcCCCCEEEEecCcceecccccccccccccccccccccccccCCCCCCCCCCCC-HHHhcCCCCCcHhHHHH
Confidence            999999999999999999999998762100                 001122468999999 7764      3679999


Q ss_pred             CCCcc-eeecccccCCCCCCH------------------HHHHHHHHHHHhhcccCcCCCC-CHHHHHHHHccC
Q 045577          312 EGDPM-EIIDEQTKMKGPFSA------------------DELVKCIEVGLLCVQQRIEDWP-TMSSVLTMLSNE  365 (392)
Q Consensus       312 ~G~v~-~~ld~~~~~~~~~~~------------------~~~~~~~~i~~~Cl~~dp~~RP-sm~eVv~~L~~~  365 (392)
                      .|+++ +++.+..++......                  +....+.+++.+|++.||++|| +++++.+.|+..
T Consensus       217 LGVILyELLTG~~PF~~~~~~ki~~~~~i~~P~~~~p~~~iP~~L~~LI~rcL~~DP~kR~ss~eeLl~~Le~~  290 (932)
T PRK13184        217 LGVILYQMLTLSFPYRRKKGRKISYRDVILSPIEVAPYREIPPFLSQIAMKALAVDPAERYSSVQELKQDLEPH  290 (932)
T ss_pred             HHHHHHHHHHCCCCCCCcchhhhhhhhhccChhhccccccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence            99877 566654443221110                  1123466788899999999996 577787777653

>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

Probab=99.74  E-value=5.5e-18  Score=161.57  Aligned_cols=157  Identities=25%  Similarity=0.321  Sum_probs=111.5

Q ss_pred             CCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEcCCCCCeEeeeeceE
Q 045577          199 GEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEINPNISDFGPAR  278 (392)
Q Consensus       199 ~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~~~~~~kl~DFGla~  278 (392)
                      +..|++|||+++ ++............+..+..++.|++.||.|||+.   +++||||||+||+++.++.+||+|||++.
T Consensus        81 ~~~~lv~e~~~~-~l~~~l~~~~~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~kL~dfg~~~  156 (309)
T cd07845          81 DSIFLVMEYCEQ-DLASLLDNMPTPFSESQVKCLMLQLLRGLQYLHEN---FIIHRDLKVSNLLLTDKGCLKIADFGLAR  156 (309)
T ss_pred             CeEEEEEecCCC-CHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEECccceee
Confidence            457999999985 44433322222334555788999999999999998   89999999999999999999999999998


Q ss_pred             EeCCCCcceeceeeecccccCchhHH-------HHHHHhcCCCcc-eeecccccCCCCCCHH------------------
Q 045577          279 IFGDQTEEVTGRVIGTQTLKTVPELL-------QAWKLWSEGDPM-EIIDEQTKMKGPFSAD------------------  332 (392)
Q Consensus       279 ~~~~~~~~~~~~~~gt~~y~a~~~~~-------~~~diws~G~v~-~~ld~~~~~~~~~~~~------------------  332 (392)
                      ........ .....++..|+| ||..       .+.|+|+.|+++ +++.+.+.+......+                  
T Consensus       157 ~~~~~~~~-~~~~~~~~~y~a-PE~~~~~~~~~~~~DvwslG~il~el~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~  234 (309)
T cd07845         157 TYGLPAKP-MTPKVVTLWYRA-PELLLGCTTYTTAIDMWAVGCILAELLAHKPLLPGKSEIEQLDLIIQLLGTPNESIWP  234 (309)
T ss_pred             ecCCccCC-CCcccccccccC-hhhhcCCCCcCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChhhch
Confidence            76532211 122345778988 6654       368999999876 4444433322111111                  


Q ss_pred             ---------------------------HHHHHHHHHHhhcccCcCCCCCHHHHHHH
Q 045577          333 ---------------------------ELVKCIEVGLLCVQQRIEDWPTMSSVLTM  361 (392)
Q Consensus       333 ---------------------------~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~  361 (392)
                                                 ....+.+++..|++.||++||++.++++.
T Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~~il~h  290 (309)
T cd07845         235 GFSDLPLVGKFTLPKQPYNNLKHKFPWLSEAGLRLLNFLLMYDPKKRATAEEALES  290 (309)
T ss_pred             hhhcccccccccccCCCCCchHHhccccCHHHHHHHHHHhcCChhhCcCHHHHhcC
Confidence                                       12334567889999999999999998864

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing

>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

Probab=99.74  E-value=2.5e-18  Score=163.28  Aligned_cols=170  Identities=15%  Similarity=0.253  Sum_probs=121.6

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEc
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLD  264 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~  264 (392)
                      |++.++.......++..|++|||++++++.....+. + .....+..++.|++.||.|||+.   +++||||||+||+++
T Consensus        75 h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~-~-~~~~~~~~~~~~l~~~L~~LH~~---~i~H~dL~p~Nili~  149 (297)
T cd06656          75 NPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTET-C-MDEGQIAAVCRECLQALDFLHSN---QVIHRDIKSDNILLG  149 (297)
T ss_pred             CCCEeeEEEEEecCCEEEEeecccCCCCHHHHHHhC-C-CCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEC
Confidence            444444444444456789999999999987755332 2 33445788999999999999998   899999999999999


Q ss_pred             CCCCCeEeeeeceEEeCCCCcceeceeeecccccCchhHH------HHHHHhcCCCcc-eeecccccCCCC---------
Q 045577          265 AEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIIDEQTKMKGP---------  328 (392)
Q Consensus       265 ~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld~~~~~~~~---------  328 (392)
                      .++.+||+|||++........ ......+++.|++ ||..      ...|+|+.|+++ +++.+..++...         
T Consensus       150 ~~~~~~l~Dfg~~~~~~~~~~-~~~~~~~~~~y~a-PE~~~~~~~~~~~Di~slGvil~~l~tg~~pf~~~~~~~~~~~~  227 (297)
T cd06656         150 MDGSVKLTDFGFCAQITPEQS-KRSTMVGTPYWMA-PEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLI  227 (297)
T ss_pred             CCCCEEECcCccceEccCCcc-CcCcccCCccccC-HHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcchheeee
Confidence            999999999999987543221 1223467888998 6654      368999999876 344333222111         


Q ss_pred             ---------CCHHHHHHHHHHHHhhcccCcCCCCCHHHHHHH
Q 045577          329 ---------FSADELVKCIEVGLLCVQQRIEDWPTMSSVLTM  361 (392)
Q Consensus       329 ---------~~~~~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~  361 (392)
                               .+......+.+++..|++.+|++||++.+|++.
T Consensus       228 ~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~  269 (297)
T cd06656         228 ATNGTPELQNPERLSAVFRDFLNRCLEMDVDRRGSAKELLQH  269 (297)
T ss_pred             ccCCCCCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence                     111122345677889999999999999999873

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.74  E-value=2.3e-18  Score=169.12  Aligned_cols=171  Identities=18%  Similarity=0.218  Sum_probs=125.5

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEc
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLD  264 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~  264 (392)
                      |+..+.......-++.+++.+|||.+|-.+...-+-.....+.++.-++.|++.||.|||++   +|||||||..|||+.
T Consensus        88 HP~ivkLl~ayy~enkLwiliEFC~GGAVDaimlEL~r~LtE~QIqvvc~q~ldALn~LHs~---~iIHRDLKAGNiL~T  164 (1187)
T KOG0579|consen   88 HPVIVKLLSAYYFENKLWILIEFCGGGAVDAIMLELGRVLTEDQIQVVCYQVLDALNWLHSQ---NIIHRDLKAGNILLT  164 (1187)
T ss_pred             ChHHHHHHHHHhccCceEEEEeecCCchHhHHHHHhccccchHHHHHHHHHHHHHHHHHhhc---chhhhhccccceEEE
Confidence            66666666655557889999999999988775555444556666777899999999999999   899999999999999


Q ss_pred             CCCCCeEeeeeceEEeCCCCcceeceeeecccccCchhHH-----------HHHHHhcCCCcc-eeecccccCCCCC---
Q 045577          265 AEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELL-----------QAWKLWSEGDPM-EIIDEQTKMKGPF---  329 (392)
Q Consensus       265 ~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~-----------~~~diws~G~v~-~~ld~~~~~~~~~---  329 (392)
                      -+|.++++|||++.... ........+.||+.||| |++.           +..|+|++|+.+ +|....++-..-.   
T Consensus       165 ldGdirLADFGVSAKn~-~t~qkRDsFIGTPYWMA-PEVvmCET~KD~PYDykaDiWSlGITLIEMAqiEPPHhelnpMR  242 (1187)
T KOG0579|consen  165 LDGDIRLADFGVSAKNK-STRQKRDSFIGTPYWMA-PEVVMCETFKDQPYDYKADIWSLGITLIEMAQIEPPHHELNPMR  242 (1187)
T ss_pred             ecCcEeeecccccccch-hHHhhhccccCCccccc-chheeeccccCCCchhhhhHHhhhhHHHHHhccCCCccccchHH
Confidence            99999999999875432 11222334789999999 6543           588999999865 4333322211111   


Q ss_pred             ---------------CHHHHHHHHHHHHhhcccCcCCCCCHHHHHH
Q 045577          330 ---------------SADELVKCIEVGLLCVQQRIEDWPTMSSVLT  360 (392)
Q Consensus       330 ---------------~~~~~~~~~~i~~~Cl~~dp~~RPsm~eVv~  360 (392)
                                     +..-...+.++...|+..||+.||+..++++
T Consensus       243 VllKiaKSePPTLlqPS~Ws~~F~DfLk~cL~Knp~~Rp~aaqll~  288 (1187)
T KOG0579|consen  243 VLLKIAKSEPPTLLQPSHWSRSFSDFLKRCLVKNPRNRPPAAQLLK  288 (1187)
T ss_pred             HHHHHhhcCCCcccCcchhhhHHHHHHHHHHhcCCccCCCHHHHhh
Confidence                           1122224445667999999999999988764

>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1

Probab=99.74  E-value=4.1e-18  Score=161.07  Aligned_cols=156  Identities=22%  Similarity=0.294  Sum_probs=112.0

Q ss_pred             CCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEcCCCCCeEeeeeceE
Q 045577          199 GEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEINPNISDFGPAR  278 (392)
Q Consensus       199 ~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~~~~~~kl~DFGla~  278 (392)
                      +..|++|||+++ ++........-......+..++.|++.||.|||+.   +++|+||||+||+++.++.+||+|||+++
T Consensus        79 ~~~~lv~e~~~~-~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~i~H~dl~p~nili~~~~~~~l~d~g~~~  154 (293)
T cd07843          79 DKIYMVMEYVEH-DLKSLMETMKQPFLQSEVKCLMLQLLSGVAHLHDN---WILHRDLKTSNLLLNNRGILKICDFGLAR  154 (293)
T ss_pred             CcEEEEehhcCc-CHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCCHHHEEECCCCcEEEeecCcee
Confidence            678999999985 55443322222234555789999999999999998   89999999999999999999999999998


Q ss_pred             EeCCCCcceeceeeecccccCchhHH-------HHHHHhcCCCcc-eeecccccCCCCCCHH------------------
Q 045577          279 IFGDQTEEVTGRVIGTQTLKTVPELL-------QAWKLWSEGDPM-EIIDEQTKMKGPFSAD------------------  332 (392)
Q Consensus       279 ~~~~~~~~~~~~~~gt~~y~a~~~~~-------~~~diws~G~v~-~~ld~~~~~~~~~~~~------------------  332 (392)
                      ...... .......++..|++ ||..       ...|+|+.|+++ +++.+.+.+......+                  
T Consensus       155 ~~~~~~-~~~~~~~~~~~~~a-PE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~  232 (293)
T cd07843         155 EYGSPL-KPYTQLVVTLWYRA-PELLLGAKEYSTAIDMWSVGCIFAELLTKKPLFPGKSEIDQLNKIFKLLGTPTEKIWP  232 (293)
T ss_pred             eccCCc-cccccccccccccC-chhhcCCccccchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHH
Confidence            765321 11223457788999 6643       357999999876 4554433222111100                  


Q ss_pred             -----------------------------HHHHHHHHHHhhcccCcCCCCCHHHHHH
Q 045577          333 -----------------------------ELVKCIEVGLLCVQQRIEDWPTMSSVLT  360 (392)
Q Consensus       333 -----------------------------~~~~~~~i~~~Cl~~dp~~RPsm~eVv~  360 (392)
                                                   ....+.+++..|++.+|++||++.|+++
T Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~t~~ell~  289 (293)
T cd07843         233 GFSELPGAKKKTFTKYPYNQLRKKFPALSLSDNGFDLLNRLLTYDPAKRISAEDALK  289 (293)
T ss_pred             HhhccchhcccccccccchhhhccccccCCChHHHHHHHHHhccCccccCCHHHHhc
Confidence                                         1234557788999999999999999875

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the

>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin

Probab=99.74  E-value=2.9e-18  Score=161.87  Aligned_cols=158  Identities=22%  Similarity=0.297  Sum_probs=115.7

Q ss_pred             CCeeEEecCccCCCcChhhhh---hhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEcCCCCCeEeeee
Q 045577          199 GEVFLMFEGIKLPDKSEFTCE---FECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEINPNISDFG  275 (392)
Q Consensus       199 ~~~~lv~e~~~~~~l~~~~~~---~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~~~~~~kl~DFG  275 (392)
                      +..|++|||++++++......   ......+..+..++.|++.||.|||+.   +++|+||||+||+++.++.+||+|||
T Consensus        97 ~~~~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dlkp~nili~~~~~~kl~dfg  173 (291)
T cd06639          97 GQLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLHNN---RIIHRDVKGNNILLTTEGGVKLVDFG  173 (291)
T ss_pred             CeeEEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHEEEcCCCCEEEeecc
Confidence            468999999999998764432   112234555788999999999999998   89999999999999999999999999


Q ss_pred             ceEEeCCCCcceeceeeecccccCchhHH-----------HHHHHhcCCCcc-eeecccccCCCCCCH------------
Q 045577          276 PARIFGDQTEEVTGRVIGTQTLKTVPELL-----------QAWKLWSEGDPM-EIIDEQTKMKGPFSA------------  331 (392)
Q Consensus       276 la~~~~~~~~~~~~~~~gt~~y~a~~~~~-----------~~~diws~G~v~-~~ld~~~~~~~~~~~------------  331 (392)
                      ++........ ......|+..|++ ||..           .+.|+|+.|+++ +++.+++++......            
T Consensus       174 ~~~~~~~~~~-~~~~~~~~~~y~a-PE~~~~~~~~~~~~~~~~Di~slGvi~~el~~g~~p~~~~~~~~~~~~~~~~~~~  251 (291)
T cd06639         174 VSAQLTSTRL-RRNTSVGTPFWMA-PEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPPLFDMHPVKTLFKIPRNPPP  251 (291)
T ss_pred             cchhcccccc-cccCccCCccccC-hhhhcCCCCcccccCCccchHHHHHHHHHHhhCCCCCCCCcHHHHHHHHhcCCCC
Confidence            9876542111 1122457888999 6643           367999999876 455554333221111            


Q ss_pred             ------HHHHHHHHHHHhhcccCcCCCCCHHHHHHH
Q 045577          332 ------DELVKCIEVGLLCVQQRIEDWPTMSSVLTM  361 (392)
Q Consensus       332 ------~~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~  361 (392)
                            +....+.+++.+|++.+|++||++.++++.
T Consensus       252 ~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~  287 (291)
T cd06639         252 TLLHPEKWCRSFNHFISQCLIKDFEARPSVTHLLEH  287 (291)
T ss_pred             CCCcccccCHHHHHHHHHHhhcChhhCcCHHHHhcC
Confidence                  112246678889999999999999998863

Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre

>PTZ00266 NIMA-related protein kinase; Provisional

Probab=99.74  E-value=3.5e-18  Score=181.21  Aligned_cols=173  Identities=17%  Similarity=0.207  Sum_probs=121.3

Q ss_pred             CCCccccccCcC--CCCCeeEEecCccCCCcChhhhhhh---ccccchhhhhHHHHHHHhhhhcCcCC----CCceeecc
Q 045577          185 SGGCKRNWEADC--GDGEVFLMFEGIKLPDKSEFTCEFE---CSKYSSYVTNILYGIARVILYLPEDS----RLEIIHRD  255 (392)
Q Consensus       185 s~GCvR~~~l~C--~~~~~~lv~e~~~~~~l~~~~~~~~---~~~~~~~~~~i~~~ia~gL~yLH~~~----~~~iiHrD  255 (392)
                      |++.++......  .....|++|||+++++|...+....   ....+..++.|+.||+.||.|||+..    ..+|+|||
T Consensus        71 HPNIVrl~d~f~de~~~~lyIVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRD  150 (1021)
T PTZ00266         71 HKNIVRYIDRFLNKANQKLYILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRD  150 (1021)
T ss_pred             CCCcCeEEEEEEecCCCEEEEEEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceecc
Confidence            455555444332  1345899999999999977543321   22355558899999999999999842    12599999


Q ss_pred             cccceeEEcCC-----------------CCCeEeeeeceEEeCCCCcceeceeeecccccCchhHH--------HHHHHh
Q 045577          256 HKTSNVLLDAE-----------------INPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELL--------QAWKLW  310 (392)
Q Consensus       256 lKp~NIll~~~-----------------~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~--------~~~diw  310 (392)
                      |||+|||++..                 ..+||+|||+++.+....  ......||+.|+| ||+.        ...|+|
T Consensus       151 LKPeNILL~s~~~~lg~i~~~~~n~ng~~iVKLsDFGlAr~l~~~s--~~~s~vGTp~YmA-PEvL~ge~~~~s~KSDVW  227 (1021)
T PTZ00266        151 LKPQNIFLSTGIRHIGKITAQANNLNGRPIAKIGDFGLSKNIGIES--MAHSCVGTPYYWS-PELLLHETKSYDDKSDMW  227 (1021)
T ss_pred             CcHHHeEeecCccccccccccccccCCCCceEEccCCccccccccc--cccccCCCccccC-HHHHhccCCCCCchhHHH
Confidence            99999999642                 348999999998764221  2233578999999 7755        267999


Q ss_pred             cCCCcc-eeecccccCCCCCCHHH----------------HHHHHHHHHhhcccCcCCCCCHHHHHH
Q 045577          311 SEGDPM-EIIDEQTKMKGPFSADE----------------LVKCIEVGLLCVQQRIEDWPTMSSVLT  360 (392)
Q Consensus       311 s~G~v~-~~ld~~~~~~~~~~~~~----------------~~~~~~i~~~Cl~~dp~~RPsm~eVv~  360 (392)
                      ++|+++ +++.+..++.......+                ...+.+++..||+.+|++||++.++++
T Consensus       228 SLG~ILYELLTGk~PF~~~~~~~qli~~lk~~p~lpi~~~S~eL~dLI~~~L~~dPeeRPSa~QlL~  294 (1021)
T PTZ00266        228 ALGCIIYELCSGKTPFHKANNFSQLISELKRGPDLPIKGKSKELNILIKNLLNLSAKERPSALQCLG  294 (1021)
T ss_pred             HHHHHHHHHHHCCCCCCcCCcHHHHHHHHhcCCCCCcCCCCHHHHHHHHHHhcCChhHCcCHHHHhc
Confidence            999987 55555444432222111                234667888999999999999999884

>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

Probab=99.73  E-value=3.5e-18  Score=160.32  Aligned_cols=157  Identities=20%  Similarity=0.260  Sum_probs=113.6

Q ss_pred             CCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEcCCCCCeEeeeeceE
Q 045577          199 GEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEINPNISDFGPAR  278 (392)
Q Consensus       199 ~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~~~~~~kl~DFGla~  278 (392)
                      +..++++||+++ ++.....+.........+..++.|++.||.|||+.   +++|+||||+||+++.++.+||+|||++.
T Consensus        73 ~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~---~~~h~dl~p~nil~~~~~~~~l~d~g~~~  148 (287)
T cd07840          73 GSIYMVFEYMDH-DLTGLLDSPEVKFTESQIKCYMKQLLEGLQYLHSN---GILHRDIKGSNILINNDGVLKLADFGLAR  148 (287)
T ss_pred             CcEEEEeccccc-cHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCcHHHeEEcCCCCEEEcccccee
Confidence            679999999985 55544433322335555789999999999999998   89999999999999999999999999998


Q ss_pred             EeCCCCcceeceeeecccccCchhH-------HHHHHHhcCCCcc-eeecccccCCCCCCHH------------------
Q 045577          279 IFGDQTEEVTGRVIGTQTLKTVPEL-------LQAWKLWSEGDPM-EIIDEQTKMKGPFSAD------------------  332 (392)
Q Consensus       279 ~~~~~~~~~~~~~~gt~~y~a~~~~-------~~~~diws~G~v~-~~ld~~~~~~~~~~~~------------------  332 (392)
                      ..............++..|++ ||.       ..+.|+|+.|+++ +++.+...+......+                  
T Consensus       149 ~~~~~~~~~~~~~~~~~~y~~-PE~~~~~~~~~~~~Dv~slG~~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (287)
T cd07840         149 PYTKRNSADYTNRVITLWYRP-PELLLGATRYGPEVDMWSVGCILAELFLGKPIFQGSTELEQLEKIFELCGSPTDENWP  227 (287)
T ss_pred             eccCCCcccccccccccccCC-ceeeEccccCChHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchhhcc
Confidence            765332222223456778888 553       2468999999876 4444432221111000                  


Q ss_pred             ----------------------------HHHHHHHHHHhhcccCcCCCCCHHHHHH
Q 045577          333 ----------------------------ELVKCIEVGLLCVQQRIEDWPTMSSVLT  360 (392)
Q Consensus       333 ----------------------------~~~~~~~i~~~Cl~~dp~~RPsm~eVv~  360 (392)
                                                  ....+.+++..|++.+|++||++.++++
T Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~  283 (287)
T cd07840         228 GVSKLPWFENLKPKKPYKRRLREFFKHLIDPSALDLLDKLLTLDPKKRISADQALQ  283 (287)
T ss_pred             ccccchhhhhccccccchhHHHHHhcccCCHHHHHHHHHHcCCChhhCcCHHHHhh
Confidence                                        1345677888999999999999999875

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po

>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

Probab=99.73  E-value=3.9e-18  Score=158.85  Aligned_cols=158  Identities=23%  Similarity=0.332  Sum_probs=115.8

Q ss_pred             CCCeeEEecCccCCCcChhhhhhh---ccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEcCCCCCeEeee
Q 045577          198 DGEVFLMFEGIKLPDKSEFTCEFE---CSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEINPNISDF  274 (392)
Q Consensus       198 ~~~~~lv~e~~~~~~l~~~~~~~~---~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~~~~~~kl~DF  274 (392)
                      +...+++|||++++++........   .......+..++.|++.||.|||+.   +++|+||+|+||+++.++.+||+||
T Consensus        81 ~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~---~i~H~~l~p~ni~~~~~~~~~l~d~  157 (275)
T cd06608          81 DDQLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLHEN---KVIHRDIKGQNILLTKNAEVKLVDF  157 (275)
T ss_pred             ceEEEEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCHHHEEEccCCeEEECCC
Confidence            345799999999988866433221   2234555788999999999999998   8999999999999999999999999


Q ss_pred             eceEEeCCCCcceeceeeecccccCchhHH-----------HHHHHhcCCCcc-eeecccccCCCCCC------------
Q 045577          275 GPARIFGDQTEEVTGRVIGTQTLKTVPELL-----------QAWKLWSEGDPM-EIIDEQTKMKGPFS------------  330 (392)
Q Consensus       275 Gla~~~~~~~~~~~~~~~gt~~y~a~~~~~-----------~~~diws~G~v~-~~ld~~~~~~~~~~------------  330 (392)
                      |++....... .......|+..|+| ||..           ...|+|+.|+++ +++.+.+++.....            
T Consensus       158 ~~~~~~~~~~-~~~~~~~~~~~y~a-PE~~~~~~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~  235 (275)
T cd06608         158 GVSAQLDSTL-GRRNTFIGTPYWMA-PEVIACDEQPDASYDARSDVWSLGITAIELADGKPPLCDMHPMRALFKIPRNPP  235 (275)
T ss_pred             ccceecccch-hhhcCccccccccC-HhHhcccccccCCccccccHHHhHHHHHHHHhCCCCccccchHHHHHHhhccCC
Confidence            9987654221 11223468888999 6654           247999999876 45555433322111            


Q ss_pred             ------HHHHHHHHHHHHhhcccCcCCCCCHHHHHH
Q 045577          331 ------ADELVKCIEVGLLCVQQRIEDWPTMSSVLT  360 (392)
Q Consensus       331 ------~~~~~~~~~i~~~Cl~~dp~~RPsm~eVv~  360 (392)
                            ......+.+++.+|++.||++||++.++++
T Consensus       236 ~~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~ll~  271 (275)
T cd06608         236 PTLKSPENWSKKFNDFISECLIKNYEQRPFMEELLE  271 (275)
T ss_pred             CCCCchhhcCHHHHHHHHHHhhcChhhCcCHHHHhc
Confidence                  112235667888999999999999999976

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I

>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase

Probab=99.73  E-value=3.4e-18  Score=165.59  Aligned_cols=152  Identities=25%  Similarity=0.327  Sum_probs=110.5

Q ss_pred             CCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEcCCCCCeEeeeeceE
Q 045577          199 GEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEINPNISDFGPAR  278 (392)
Q Consensus       199 ~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~~~~~~kl~DFGla~  278 (392)
                      ...|+++|++. +++......  .......+..++.|++.||.|||+.   +|+||||||+||+++.++.+||+|||+++
T Consensus        93 ~~~~~~~~~~~-~~l~~~~~~--~~l~~~~~~~i~~qi~~aL~~LH~~---~ivHrdikp~Nil~~~~~~~kl~Dfg~~~  166 (343)
T cd07878          93 NEVYLVTNLMG-ADLNNIVKC--QKLSDEHVQFLIYQLLRGLKYIHSA---GIIHRDLKPSNVAVNEDCELRILDFGLAR  166 (343)
T ss_pred             CcEEEEeecCC-CCHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeecccCChhhEEECCCCCEEEcCCccce
Confidence            45789999884 455432211  1234555788999999999999998   89999999999999999999999999998


Q ss_pred             EeCCCCcceeceeeecccccCchhHH-------HHHHHhcCCCcc-eeecccccCCCCCCHHH-----------------
Q 045577          279 IFGDQTEEVTGRVIGTQTLKTVPELL-------QAWKLWSEGDPM-EIIDEQTKMKGPFSADE-----------------  333 (392)
Q Consensus       279 ~~~~~~~~~~~~~~gt~~y~a~~~~~-------~~~diws~G~v~-~~ld~~~~~~~~~~~~~-----------------  333 (392)
                      .....    .....|++.|+| ||+.       .+.|+|+.|+++ +++.+...+.+....+.                 
T Consensus       167 ~~~~~----~~~~~~t~~y~a-PE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~  241 (343)
T cd07878         167 QADDE----MTGYVATRWYRA-PEIMLNWMHYNQTVDIWSVGCIMAELLKGKALFPGNDYIDQLKRIMEVVGTPSPEVLK  241 (343)
T ss_pred             ecCCC----cCCccccccccC-chHhcCCccCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCCHHHHH
Confidence            75422    223468899999 6654       258999999887 45554333322111100                 


Q ss_pred             -----------------------------HHHHHHHHHhhcccCcCCCCCHHHHHHH
Q 045577          334 -----------------------------LVKCIEVGLLCVQQRIEDWPTMSSVLTM  361 (392)
Q Consensus       334 -----------------------------~~~~~~i~~~Cl~~dp~~RPsm~eVv~~  361 (392)
                                                   ...+.+++..|++.||++|||+.++++.
T Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dp~~R~s~~ell~h  298 (343)
T cd07878         242 KISSEHARKYIQSLPHMPQQDLKKIFRGANPLAIDLLEKMLVLDSDKRISASEALAH  298 (343)
T ss_pred             hcchhhHHHHhhccccccchhHHHhccCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence                                         0124577889999999999999999865

Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is

>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

Probab=99.73  E-value=4.1e-18  Score=157.69  Aligned_cols=161  Identities=20%  Similarity=0.292  Sum_probs=117.1

Q ss_pred             CCeeEEecCccCCCcChhhhhh---hccccchhhhhHHHHHHHhhhhcCcCC--CCceeecccccceeEEcCCCCCeEee
Q 045577          199 GEVFLMFEGIKLPDKSEFTCEF---ECSKYSSYVTNILYGIARVILYLPEDS--RLEIIHRDHKTSNVLLDAEINPNISD  273 (392)
Q Consensus       199 ~~~~lv~e~~~~~~l~~~~~~~---~~~~~~~~~~~i~~~ia~gL~yLH~~~--~~~iiHrDlKp~NIll~~~~~~kl~D  273 (392)
                      ...|++|||++++++.......   .....+..+..++.|++.||.|||..+  ..+++|+||||+||+++.++.+||+|
T Consensus        74 ~~~~~~~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~~i~h~dl~p~nili~~~~~~kl~d  153 (265)
T cd08217          74 QTLYIVMEYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGNTVLHRDLKPANIFLDANNNVKLGD  153 (265)
T ss_pred             CEEEEEehhccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCccccCcceecCCCHHHEEEecCCCEEEec
Confidence            4579999999999887644332   122345557889999999999999321  23899999999999999999999999


Q ss_pred             eeceEEeCCCCcceeceeeecccccCchhHH------HHHHHhcCCCcc-eeecccccCCCC----------------CC
Q 045577          274 FGPARIFGDQTEEVTGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIIDEQTKMKGP----------------FS  330 (392)
Q Consensus       274 FGla~~~~~~~~~~~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld~~~~~~~~----------------~~  330 (392)
                      ||++........ ......++..|++ ||..      ...|+|+.|+++ +++.+...+...                .+
T Consensus       154 ~g~~~~~~~~~~-~~~~~~~~~~~~~-pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~  231 (265)
T cd08217         154 FGLAKILGHDSS-FAKTYVGTPYYMS-PEQLNHMSYDEKSDIWSLGCLIYELCALSPPFTARNQLQLASKIKEGKFRRIP  231 (265)
T ss_pred             ccccccccCCcc-cccccccCCCccC-hhhhcCCCCCchhHHHHHHHHHHHHHHCCCcccCcCHHHHHHHHhcCCCCCCc
Confidence            999987653222 1223467888999 6654      367999999876 455443332221                11


Q ss_pred             HHHHHHHHHHHHhhcccCcCCCCCHHHHHHH
Q 045577          331 ADELVKCIEVGLLCVQQRIEDWPTMSSVLTM  361 (392)
Q Consensus       331 ~~~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~  361 (392)
                      ......+.+++..|++.+|++||++.+|++.
T Consensus       232 ~~~~~~~~~l~~~~l~~~p~~Rp~~~~il~~  262 (265)
T cd08217         232 YRYSSELNEVIKSMLNVDPDKRPSTEELLQL  262 (265)
T ss_pred             cccCHHHHHHHHHHccCCcccCCCHHHHhhC
Confidence            2223456678889999999999999999864

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi

>PHA02882 putative serine/threonine kinase; Provisional

Probab=99.73  E-value=5.6e-18  Score=160.65  Aligned_cols=157  Identities=20%  Similarity=0.213  Sum_probs=109.7

Q ss_pred             eeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEcCCCCCeEeeeeceEEe
Q 045577          201 VFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEINPNISDFGPARIF  280 (392)
Q Consensus       201 ~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~~~~~~kl~DFGla~~~  280 (392)
                      .|+++|++.. .+........+ ..+..+..++.|++.||.|||+.   +++||||||+|||++.++.+||+|||+++.+
T Consensus       102 ~~~~~~~~~~-~~~~~~~~~~~-~~~~~~~~i~~qi~~~l~~lH~~---~iiHrDiKp~Nill~~~~~~~l~DFGla~~~  176 (294)
T PHA02882        102 RFILLEKLVE-NTKEIFKRIKC-KNKKLIKNIMKDMLTTLEYIHEH---GISHGDIKPENIMVDGNNRGYIIDYGIASHF  176 (294)
T ss_pred             EEEEEehhcc-CHHHHHHhhcc-CCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCcEEEEEcCCceee
Confidence            3667776543 22221111111 23444678999999999999998   8999999999999999999999999999876


Q ss_pred             CCCC------cceeceeeecccccCchhHH------HHHHHhcCCCcc-eeecccccCCCCCC-H---------------
Q 045577          281 GDQT------EEVTGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIIDEQTKMKGPFS-A---------------  331 (392)
Q Consensus       281 ~~~~------~~~~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld~~~~~~~~~~-~---------------  331 (392)
                      ....      ........||+.|+| |+..      ...|+||.|+++ +++.+..++.+... .               
T Consensus       177 ~~~~~~~~~~~~~~~~~~gt~~y~a-pe~~~~~~~~~~~DiwSlG~~l~el~~g~~P~~~~~~~~~~~~~~~~~~~~~~~  255 (294)
T PHA02882        177 IIHGKHIEYSKEQKDLHRGTLYYAG-LDAHNGACVTRRGDLESLGYCMLKWAGIKLPWKGFGHNGNLIHAAKCDFIKRLH  255 (294)
T ss_pred             ccCCcccccccccccccCCCccccC-HHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCccccchHHHHHhHHHHHHHhh
Confidence            4211      111122468999999 6653      478999999976 66666444433211 0               


Q ss_pred             -------HHHHHHHHHHHhhcccCcCCCCCHHHHHHHHc
Q 045577          332 -------DELVKCIEVGLLCVQQRIEDWPTMSSVLTMLS  363 (392)
Q Consensus       332 -------~~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~L~  363 (392)
                             .....+.+++..|++.+|++||++.++.+.|+
T Consensus       256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~rp~~~~l~~~~~  294 (294)
T PHA02882        256 EGKIKIKNANKFIYDFIECVTKLSYEEKPDYDALIKIFD  294 (294)
T ss_pred             hhhhccCCCCHHHHHHHHHHHhCCCCCCCCHHHHHHhhC
Confidence                   01224556788999999999999999999874

>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]

Probab=99.73  E-value=1.8e-18  Score=179.62  Aligned_cols=121  Identities=23%  Similarity=0.316  Sum_probs=103.3

Q ss_pred             CCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEcCCCCCeEeeeec
Q 045577          197 GDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEINPNISDFGP  276 (392)
Q Consensus       197 ~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~~~~~~kl~DFGl  276 (392)
                      ++..+|+|||||+|||+-...-+.. ..++.++..++..|..||.-||+.   +.|||||||.|||||..|++|++|||.
T Consensus       146 D~~~LYlVMdY~pGGDlltLlSk~~-~~pE~~ArFY~aEiVlAldslH~m---gyVHRDiKPDNvLld~~GHikLADFGs  221 (1317)
T KOG0612|consen  146 DERYLYLVMDYMPGGDLLTLLSKFD-RLPEDWARFYTAEIVLALDSLHSM---GYVHRDIKPDNVLLDKSGHIKLADFGS  221 (1317)
T ss_pred             CccceEEEEecccCchHHHHHhhcC-CChHHHHHHHHHHHHHHHHHHHhc---cceeccCCcceeEecccCcEeeccchh
Confidence            4578999999999999988666655 567788888999999999999998   999999999999999999999999999


Q ss_pred             eEEeCCCCcceeceeeecccccCchhHHH-----------HHHHhcCCCcc-eeeccc
Q 045577          277 ARIFGDQTEEVTGRVIGTQTLKTVPELLQ-----------AWKLWSEGDPM-EIIDEQ  322 (392)
Q Consensus       277 a~~~~~~~~~~~~~~~gt~~y~a~~~~~~-----------~~diws~G~v~-~~ld~~  322 (392)
                      +-.+...........+|||-|++ |+++.           .+|.|+.|+++ +|+.+.
T Consensus       222 Clkm~~dG~V~s~~aVGTPDYIS-PEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~  278 (1317)
T KOG0612|consen  222 CLKMDADGTVRSSVAVGTPDYIS-PEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGE  278 (1317)
T ss_pred             HHhcCCCCcEEeccccCCCCccC-HHHHHhhcCCccccCCccchhhhHHHHHHHHcCC
Confidence            88777556666667899999999 88875           45899999876 555553

>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3

Probab=99.73  E-value=3e-18  Score=161.24  Aligned_cols=156  Identities=15%  Similarity=0.124  Sum_probs=116.5

Q ss_pred             CCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEcCCCCCeEeeeece
Q 045577          198 DGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEINPNISDFGPA  277 (392)
Q Consensus       198 ~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~~~~~~kl~DFGla  277 (392)
                      .+..+++|||+.++++......... ..+..+..++.|++.||.|||+.   +++||||||+||+++.++.+|++|||++
T Consensus        69 ~~~~~lv~e~~~~~~L~~~i~~~~~-l~~~~~~~i~~qi~~al~~lH~~---~ivH~dikp~Nil~~~~~~~~l~dfg~~  144 (279)
T cd05633          69 PDKLCFILDLMNGGDLHYHLSQHGV-FSEKEMRFYATEIILGLEHMHNR---FVVYRDLKPANILLDEHGHVRISDLGLA  144 (279)
T ss_pred             CCeEEEEEecCCCCCHHHHHHhcCC-CCHHHHHHHHHHHHHHHHHHHHC---CcCCCCCCHHHEEECCCCCEEEccCCcc
Confidence            4578999999999999766554433 34455788999999999999998   8999999999999999999999999998


Q ss_pred             EEeCCCCcceeceeeecccccCchhHH-------HHHHHhcCCCcc-eeecccccCCCCC--CHH---------------
Q 045577          278 RIFGDQTEEVTGRVIGTQTLKTVPELL-------QAWKLWSEGDPM-EIIDEQTKMKGPF--SAD---------------  332 (392)
Q Consensus       278 ~~~~~~~~~~~~~~~gt~~y~a~~~~~-------~~~diws~G~v~-~~ld~~~~~~~~~--~~~---------------  332 (392)
                      .......   .....|+..|++ ||..       ...|+|+.|+++ +++.+..++....  ..+               
T Consensus       145 ~~~~~~~---~~~~~~~~~y~a-PE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~  220 (279)
T cd05633         145 CDFSKKK---PHASVGTHGYMA-PEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTVNVELPD  220 (279)
T ss_pred             eeccccC---ccCcCCCcCccC-HHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcCCCCCcCHHHHHHHhhcCCcCCcc
Confidence            7654221   122468899999 6654       257999999876 5555543332111  111               


Q ss_pred             -HHHHHHHHHHhhcccCcCCCC-----CHHHHHHH
Q 045577          333 -ELVKCIEVGLLCVQQRIEDWP-----TMSSVLTM  361 (392)
Q Consensus       333 -~~~~~~~i~~~Cl~~dp~~RP-----sm~eVv~~  361 (392)
                       ....+.+++..|++.+|++||     ++.++++.
T Consensus       221 ~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~h  255 (279)
T cd05633         221 SFSPELKSLLEGLLQRDVSKRLGCLGRGAQEVKEH  255 (279)
T ss_pred             ccCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHhC
Confidence             122455777899999999999     59988875

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi

>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases

Probab=99.73  E-value=2.9e-18  Score=161.41  Aligned_cols=171  Identities=20%  Similarity=0.260  Sum_probs=121.8

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhh--hccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeE
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEF--ECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVL  262 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~--~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIl  262 (392)
                      |++.++.......++..|++|||++++++.......  .....+..+..++.|++.||.|||+.+  +++|+||||+||+
T Consensus        58 ~~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~--~i~H~dl~p~nil  135 (286)
T cd06622          58 SPYIVDFYGAFFIEGAVYMCMEYMDAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKEEH--NIIHRDVKPTNVL  135 (286)
T ss_pred             CCcHHhhhhheecCCeEEEEEeecCCCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhcC--CEeeCCCCHHHEE
Confidence            444444444444467899999999999986644332  123455667899999999999999632  7999999999999


Q ss_pred             EcCCCCCeEeeeeceEEeCCCCcceeceeeecccccCchhHH------------HHHHHhcCCCcc-eeecccccCCCC-
Q 045577          263 LDAEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELL------------QAWKLWSEGDPM-EIIDEQTKMKGP-  328 (392)
Q Consensus       263 l~~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~------------~~~diws~G~v~-~~ld~~~~~~~~-  328 (392)
                      ++.++.+||+|||++..+...   ......++..|++ ||..            ...|+|+.|+++ +++.+..++... 
T Consensus       136 ~~~~~~~~l~dfg~~~~~~~~---~~~~~~~~~~y~a-PE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~  211 (286)
T cd06622         136 VNGNGQVKLCDFGVSGNLVAS---LAKTNIGCQSYMA-PERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPPET  211 (286)
T ss_pred             ECCCCCEEEeecCCcccccCC---ccccCCCccCccC-cchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCCCcc
Confidence            999999999999998765321   1222457788998 6543            357999999876 455443332211 


Q ss_pred             ------------------CCHHHHHHHHHHHHhhcccCcCCCCCHHHHHHH
Q 045577          329 ------------------FSADELVKCIEVGLLCVQQRIEDWPTMSSVLTM  361 (392)
Q Consensus       329 ------------------~~~~~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~  361 (392)
                                        .+......+.+++.+|++.+|++||++.++++.
T Consensus       212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~  262 (286)
T cd06622         212 YANIFAQLSAIVDGDPPTLPSGYSDDAQDFVAKCLNKIPNRRPTYAQLLEH  262 (286)
T ss_pred             hhhHHHHHHHHhhcCCCCCCcccCHHHHHHHHHHcccCcccCCCHHHHhcC
Confidence                              111122345677889999999999999998874

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

Probab=99.73  E-value=5.4e-18  Score=158.54  Aligned_cols=168  Identities=18%  Similarity=0.269  Sum_probs=122.8

Q ss_pred             CccccccCcCCCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEcCC
Q 045577          187 GCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAE  266 (392)
Q Consensus       187 GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~~~  266 (392)
                      +.++.......+...|+++||++++++.......  ......+..++.|++.||.|||+.   +++|+||+|+||+++.+
T Consensus        60 ~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~--~~~~~~~~~~~~ql~~~l~~lh~~---~i~h~dl~p~ni~i~~~  134 (274)
T cd06609          60 YITKYYGSFLKGSKLWIIMEYCGGGSCLDLLKPG--KLDETYIAFILREVLLGLEYLHEE---GKIHRDIKAANILLSEE  134 (274)
T ss_pred             CeeeeeEEEEECCeEEEEEEeeCCCcHHHHHhhc--CCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEECCC
Confidence            3333333333456789999999999987655432  345555888999999999999998   89999999999999999


Q ss_pred             CCCeEeeeeceEEeCCCCcceeceeeecccccCchhHH------HHHHHhcCCCcc-eeecccccCCCCCCH--------
Q 045577          267 INPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIIDEQTKMKGPFSA--------  331 (392)
Q Consensus       267 ~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld~~~~~~~~~~~--------  331 (392)
                      +.++|+|||+++.+..... ......++..|++ ||..      .+.|+|+.|+++ +++.+.+++......        
T Consensus       135 ~~~~l~d~g~~~~~~~~~~-~~~~~~~~~~y~~-PE~~~~~~~~~~sDv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~  212 (274)
T cd06609         135 GDVKLADFGVSGQLTSTMS-KRNTFVGTPFWMA-PEVIKQSGYDEKADIWSLGITAIELAKGEPPLSDLHPMRVLFLIPK  212 (274)
T ss_pred             CCEEEcccccceeeccccc-ccccccCCccccC-hhhhccCCCCchhhHHHHHHHHHHHHhCCCCcccCchHHHHHHhhh
Confidence            9999999999988753221 2223467888999 6654      368999999866 555554333221110        


Q ss_pred             --------H-HHHHHHHHHHhhcccCcCCCCCHHHHHHH
Q 045577          332 --------D-ELVKCIEVGLLCVQQRIEDWPTMSSVLTM  361 (392)
Q Consensus       332 --------~-~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~  361 (392)
                              . ....+.+++..|++.+|++||+++++++.
T Consensus       213 ~~~~~~~~~~~~~~~~~~l~~~l~~~p~~Rpt~~~il~~  251 (274)
T cd06609         213 NNPPSLEGNKFSKPFKDFVSLCLNKDPKERPSAKELLKH  251 (274)
T ss_pred             cCCCCCcccccCHHHHHHHHHHhhCChhhCcCHHHHhhC
Confidence                    0 22356778889999999999999999764

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)

>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1

Probab=99.73  E-value=4.8e-18  Score=157.05  Aligned_cols=160  Identities=18%  Similarity=0.275  Sum_probs=117.4

Q ss_pred             CCCCCeeEEecCccCCCcChhhhhhhc-cccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEcCCCCCeEeee
Q 045577          196 CGDGEVFLMFEGIKLPDKSEFTCEFEC-SKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEINPNISDF  274 (392)
Q Consensus       196 C~~~~~~lv~e~~~~~~l~~~~~~~~~-~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~~~~~~kl~DF  274 (392)
                      ..++..|+++||+.++++......... ......+.+++.|++.||.|||+.   +++|+||+|+||+++.++.++|+||
T Consensus        69 ~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~~l~~~nil~~~~~~~~l~d~  145 (256)
T cd08218          69 EENGNLYIVMDYCEGGDLYKKINAQRGVLFPEDQILDWFVQICLALKHVHDR---KILHRDIKSQNIFLTKDGTIKLGDF  145 (256)
T ss_pred             cCCCeEEEEEecCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCCCEEEeec
Confidence            345678999999999888765544322 234556788999999999999998   8999999999999999999999999


Q ss_pred             eceEEeCCCCcceeceeeecccccCchhHH------HHHHHhcCCCcc-eeecccccCCCC----------------CCH
Q 045577          275 GPARIFGDQTEEVTGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIIDEQTKMKGP----------------FSA  331 (392)
Q Consensus       275 Gla~~~~~~~~~~~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld~~~~~~~~----------------~~~  331 (392)
                      |++........ ......|+..|++ ||..      .+.|+|+.|+++ +++.+...+...                .+.
T Consensus       146 ~~~~~~~~~~~-~~~~~~~~~~~~~-pe~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (256)
T cd08218         146 GIARVLNSTVE-LARTCIGTPYYLS-PEICENRPYNNKSDIWALGCVLYEMCTLKHAFEAGNMKNLVLKIIRGSYPPVSS  223 (256)
T ss_pred             cceeecCcchh-hhhhccCCccccC-HHHhCCCCCCCccchhHHHHHHHHHHcCCCCccCCCHHHHHHHHhcCCCCCCcc
Confidence            99987542211 1223457888998 7764      257999999876 344432222111                111


Q ss_pred             HHHHHHHHHHHhhcccCcCCCCCHHHHHH
Q 045577          332 DELVKCIEVGLLCVQQRIEDWPTMSSVLT  360 (392)
Q Consensus       332 ~~~~~~~~i~~~Cl~~dp~~RPsm~eVv~  360 (392)
                      .....+.+++.+|++.+|++||+|.+|++
T Consensus       224 ~~~~~~~~li~~~l~~~p~~Rp~~~~vl~  252 (256)
T cd08218         224 HYSYDLRNLVSQLFKRNPRDRPSVNSILE  252 (256)
T ss_pred             cCCHHHHHHHHHHhhCChhhCcCHHHHhh
Confidence            12235667888999999999999999986

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti

>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase

Probab=99.73  E-value=2.6e-18  Score=163.63  Aligned_cols=176  Identities=15%  Similarity=0.138  Sum_probs=122.8

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEc
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLD  264 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~  264 (392)
                      |++.++.....+.++..+++|||++++++........ ...+..+..++.|++.||.|||+.   +++||||||+||+++
T Consensus        60 ~~~i~~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~-~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~NIll~  135 (305)
T cd05609          60 NPFVVSMFCSFETKRHLCMVMEYVEGGDCATLLKNIG-ALPVDMARMYFAETVLALEYLHNY---GIVHRDLKPDNLLIT  135 (305)
T ss_pred             CCCeeeeEEEEecCCEEEEEEecCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCchHHEEEC
Confidence            3444444433444567899999999999877654332 234555778899999999999998   899999999999999


Q ss_pred             CCCCCeEeeeeceEEeCCC--------------CcceeceeeecccccCchhHH------HHHHHhcCCCcc-eeecccc
Q 045577          265 AEINPNISDFGPARIFGDQ--------------TEEVTGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIIDEQT  323 (392)
Q Consensus       265 ~~~~~kl~DFGla~~~~~~--------------~~~~~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld~~~  323 (392)
                      .++.+|++|||+++.....              .........++..|++ ||..      ...|+|+.|+++ +++.+..
T Consensus       136 ~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~a-PE~~~~~~~~~~~Di~slG~vl~el~~g~~  214 (305)
T cd05609         136 SMGHIKLTDFGLSKIGLMSLTTNLYEGHIEKDTREFLDKQVCGTPEYIA-PEVILRQGYGKPVDWWAMGIILYEFLVGCV  214 (305)
T ss_pred             CCCCEEEeeCCCccccCcCccccccccccccchhhccccCCccCccccC-chhccCCCCCchhhHHHHHHHHHHHHhCCC
Confidence            9999999999998742100              0001112456788998 6543      368999999876 5555433


Q ss_pred             cCCCCCCHH------------------HHHHHHHHHHhhcccCcCCCCCHHHHHHHHccC
Q 045577          324 KMKGPFSAD------------------ELVKCIEVGLLCVQQRIEDWPTMSSVLTMLSNE  365 (392)
Q Consensus       324 ~~~~~~~~~------------------~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~L~~~  365 (392)
                      ++.+....+                  ....+.+++.+|++.+|++||++.++.+.|+..
T Consensus       215 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~ll~~~  274 (305)
T cd05609         215 PFFGDTPEELFGQVISDDIEWPEGDEALPADAQDLISRLLRQNPLERLGTGGAFEVKQHR  274 (305)
T ss_pred             CCCCCCHHHHHHHHHhcccCCCCccccCCHHHHHHHHHHhccChhhccCccCHHHHHhCc
Confidence            332221111                  123456788899999999999987788777663

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a

>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

Probab=99.73  E-value=4.8e-18  Score=158.61  Aligned_cols=172  Identities=17%  Similarity=0.204  Sum_probs=120.1

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEc
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLD  264 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~  264 (392)
                      |++.++........+..+++|||+.++++.....+. .......+..++.|++.||.|||+.   +++|+||+|+||+++
T Consensus        67 h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~~~nil~~  142 (272)
T cd06629          67 HLNIVQYLGFETTEEYLSIFLEYVPGGSIGSCLRTY-GRFEEQLVRFFTEQVLEGLAYLHSK---GILHRDLKADNLLVD  142 (272)
T ss_pred             CCCcceEEEEeccCCceEEEEecCCCCcHHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHhhC---CeeecCCChhhEEEc
Confidence            444444433333346789999999999987654443 2334445678899999999999998   899999999999999


Q ss_pred             CCCCCeEeeeeceEEeCCCC-cceeceeeecccccCchhHH--------HHHHHhcCCCcc-eeecccccCCCC------
Q 045577          265 AEINPNISDFGPARIFGDQT-EEVTGRVIGTQTLKTVPELL--------QAWKLWSEGDPM-EIIDEQTKMKGP------  328 (392)
Q Consensus       265 ~~~~~kl~DFGla~~~~~~~-~~~~~~~~gt~~y~a~~~~~--------~~~diws~G~v~-~~ld~~~~~~~~------  328 (392)
                      .++.+|++|||+++...... ........|+..|++ ||..        .+.|+|+.|+++ +++.+...+...      
T Consensus       143 ~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~y~~-PE~~~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~  221 (272)
T cd06629         143 ADGICKISDFGISKKSDDIYDNDQNMSMQGSVFWMA-PEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPWSDEEAIAAM  221 (272)
T ss_pred             CCCeEEEeeccccccccccccccccccccCCccccC-HHHhccccCCCCccchhHHHHHHHHHHHhCCCCCcCcchHHHH
Confidence            99999999999987654211 111223467888998 6643        246999999876 343332222110      


Q ss_pred             -----------CC----HHHHHHHHHHHHhhcccCcCCCCCHHHHHHH
Q 045577          329 -----------FS----ADELVKCIEVGLLCVQQRIEDWPTMSSVLTM  361 (392)
Q Consensus       329 -----------~~----~~~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~  361 (392)
                                 .+    ......+.+++..|++.+|++||++.+|++.
T Consensus       222 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~  269 (272)
T cd06629         222 FKLGNKRSAPPIPPDVSMNLSPVALDFLNACFTINPDNRPTARELLQH  269 (272)
T ss_pred             HHhhccccCCcCCccccccCCHHHHHHHHHHhcCChhhCCCHHHHhhC
Confidence                       00    1113456678889999999999999998863

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte

>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases

Probab=99.73  E-value=1e-17  Score=156.92  Aligned_cols=170  Identities=21%  Similarity=0.309  Sum_probs=121.1

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEc
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLD  264 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~  264 (392)
                      +++.++.......+...++++||++. ++...............+..++.|++.||.|||+.   +++|+||||+||+++
T Consensus        57 ~~~i~~~~~~~~~~~~~~~v~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~p~nili~  132 (283)
T cd05118          57 HPNIIKLLDVFRHKGDLYLVFEFMDT-DLYKLIKDRQRGLPESLIKSYLYQLLQGLAFCHSH---GILHRDLKPENLLIN  132 (283)
T ss_pred             CCCcchHHHhhccCCCEEEEEeccCC-CHHHHHHhhcccCCHHHHHHHHHHHHHHHHHHHHC---CeeecCcCHHHEEEC
Confidence            55555555555556789999999985 55444333222334555788999999999999998   899999999999999


Q ss_pred             CCCCCeEeeeeceEEeCCCCcceeceeeecccccCchhHH-------HHHHHhcCCCcc-eeecccccCCCCCCH-----
Q 045577          265 AEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELL-------QAWKLWSEGDPM-EIIDEQTKMKGPFSA-----  331 (392)
Q Consensus       265 ~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~-------~~~diws~G~v~-~~ld~~~~~~~~~~~-----  331 (392)
                      .++.+||+|||.+........ ......++..|++ ||..       ...|+|+.|+++ +++.++..+......     
T Consensus       133 ~~~~~~l~df~~~~~~~~~~~-~~~~~~~~~~~~~-PE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~  210 (283)
T cd05118         133 TEGVLKLADFGLARSFGSPVR-PYTHYVVTRWYRA-PELLLGDKGYSTPVDIWSVGCIFAELLSRRPLFPGKSEIDQLFK  210 (283)
T ss_pred             CCCcEEEeeeeeeEecCCCcc-cccCccCcccccC-cHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHH
Confidence            999999999999987653321 1122456777888 6654       357999999876 444443322211110     


Q ss_pred             ----------------------------------------HHHHHHHHHHHhhcccCcCCCCCHHHHHH
Q 045577          332 ----------------------------------------DELVKCIEVGLLCVQQRIEDWPTMSSVLT  360 (392)
Q Consensus       332 ----------------------------------------~~~~~~~~i~~~Cl~~dp~~RPsm~eVv~  360 (392)
                                                              .....+.+++..|++.+|.+||++.+++.
T Consensus       211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~ll~  279 (283)
T cd05118         211 IFRTLGTPDPEVWPKFTSLARNYKFSFPKKAGMPLPKLFPNASPQALDLLSQMLHYDPHKRITAEQALA  279 (283)
T ss_pred             HHHHcCCCchHhcccchhhhhhhhhhhccccccCHHHhhhhhCHHHHHHHHHHhccCcccCcCHHHHhh
Confidence                                                    11235678889999999999999999875

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They

>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

Probab=99.73  E-value=6.7e-18  Score=158.37  Aligned_cols=158  Identities=20%  Similarity=0.270  Sum_probs=117.7

Q ss_pred             CCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEcCCCCCeEeeeec
Q 045577          197 GDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEINPNISDFGP  276 (392)
Q Consensus       197 ~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~~~~~~kl~DFGl  276 (392)
                      .+...|++|||++++++......  .......+..++.|++.||.|||+.   +++|+||+|+||+++.++.++++|||+
T Consensus        73 ~~~~~~lv~e~~~~~~L~~~i~~--~~l~~~~~~~~~~~l~~~l~~lh~~---~ivH~dl~p~Nil~~~~~~~~l~dfg~  147 (277)
T cd06640          73 KGTKLWIIMEYLGGGSALDLLRA--GPFDEFQIATMLKEILKGLDYLHSE---KKIHRDIKAANVLLSEQGDVKLADFGV  147 (277)
T ss_pred             ECCEEEEEEecCCCCcHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhC---CccCcCCChhhEEEcCCCCEEEccccc
Confidence            35678999999999998765432  2234445778899999999999998   899999999999999999999999999


Q ss_pred             eEEeCCCCcceeceeeecccccCchhHH------HHHHHhcCCCcc-eeecccccCCC----------------CCCHHH
Q 045577          277 ARIFGDQTEEVTGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIIDEQTKMKG----------------PFSADE  333 (392)
Q Consensus       277 a~~~~~~~~~~~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld~~~~~~~----------------~~~~~~  333 (392)
                      +........ ......++..|++ ||..      ...|+|+.|+++ +++.+...+..                ......
T Consensus       148 ~~~~~~~~~-~~~~~~~~~~y~a-pE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~  225 (277)
T cd06640         148 AGQLTDTQI-KRNTFVGTPFWMA-PEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPMRVLFLIPKNNPPTLTGEF  225 (277)
T ss_pred             ceeccCCcc-ccccccCcccccC-HhHhccCCCccHHHHHHHHHHHHHHHHCCCCCCCcChHhHhhhhhcCCCCCCchhh
Confidence            987653221 1222457788888 6654      368999999876 44444332211                111233


Q ss_pred             HHHHHHHHHhhcccCcCCCCCHHHHHHH
Q 045577          334 LVKCIEVGLLCVQQRIEDWPTMSSVLTM  361 (392)
Q Consensus       334 ~~~~~~i~~~Cl~~dp~~RPsm~eVv~~  361 (392)
                      ...+.+++..|++.+|++||++.++++.
T Consensus       226 ~~~~~~li~~~l~~~p~~Rp~~~~il~~  253 (277)
T cd06640         226 SKPFKEFIDACLNKDPSFRPTAKELLKH  253 (277)
T ss_pred             hHHHHHHHHHHcccCcccCcCHHHHHhC
Confidence            4566788889999999999999999765

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter

>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

Probab=99.73  E-value=4.2e-18  Score=157.93  Aligned_cols=170  Identities=16%  Similarity=0.146  Sum_probs=123.6

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEc
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLD  264 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~  264 (392)
                      |+++++.......++..|+++||++++++......... .....+..++.|++.||.|||+.   +++|+||+|+||+++
T Consensus        56 ~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~-~~~~~~~~i~~qi~~aL~~lH~~---~i~H~dl~p~nil~~  131 (260)
T cd05611          56 SPYVAKLYYSFQSKDYLYLVMEYLNGGDCASLIKTLGG-LPEDWAKQYIAEVVLGVEDLHQR---GIIHRDIKPENLLID  131 (260)
T ss_pred             CCCeeeeeeeEEcCCeEEEEEeccCCCCHHHHHHHcCC-CCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEEC
Confidence            55555555444445679999999999998775543322 34555788999999999999998   899999999999999


Q ss_pred             CCCCCeEeeeeceEEeCCCCcceeceeeecccccCchhHH------HHHHHhcCCCcc-eeecccccCCCCCC-------
Q 045577          265 AEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIIDEQTKMKGPFS-------  330 (392)
Q Consensus       265 ~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld~~~~~~~~~~-------  330 (392)
                      .++.+||+|||+++....     .....++..|++ ||..      ...|+|+.|+++ +++.+..++.....       
T Consensus       132 ~~~~~~l~dfg~~~~~~~-----~~~~~~~~~y~~-pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~  205 (260)
T cd05611         132 QTGHLKLTDFGLSRNGLE-----NKKFVGTPDYLA-PETILGVGDDKMSDWWSLGCVIFEFLFGYPPFHAETPDAVFDNI  205 (260)
T ss_pred             CCCcEEEeecccceeccc-----cccCCCCcCccC-hhhhcCCCCcchhhhHHHHHHHHHHHHCCCCCCCCCHHHHHHHH
Confidence            999999999999876432     122457788888 6543      367999999876 44444333221111       


Q ss_pred             ------------HHHHHHHHHHHHhhcccCcCCCCCHHHHHHHHcc
Q 045577          331 ------------ADELVKCIEVGLLCVQQRIEDWPTMSSVLTMLSN  364 (392)
Q Consensus       331 ------------~~~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~L~~  364 (392)
                                  ......+.+++..|++.+|++||++.++.+.|..
T Consensus       206 ~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~l~~  251 (260)
T cd05611         206 LSRRINWPEEVKEFCSPEAVDLINRLLCMDPAKRLGANGYQEIKSH  251 (260)
T ss_pred             HhcccCCCCcccccCCHHHHHHHHHHccCCHHHccCCCcHHHHHcC
Confidence                        0122456778889999999999988777776653

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do

>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12

Probab=99.73  E-value=7.8e-18  Score=159.61  Aligned_cols=157  Identities=19%  Similarity=0.239  Sum_probs=110.9

Q ss_pred             CCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEcCCCCCeEeeeeceE
Q 045577          199 GEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEINPNISDFGPAR  278 (392)
Q Consensus       199 ~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~~~~~~kl~DFGla~  278 (392)
                      +..++++||+++. +...............+..++.|++.||.|||+.   +|+|+||||+||+++.++.+||+|||++.
T Consensus        89 ~~~~lv~e~~~~~-l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~i~H~dl~p~nili~~~~~~kl~dfg~~~  164 (302)
T cd07864          89 GAFYLVFEYMDHD-LMGLLESGLVHFSEDHIKSFMKQLLEGLNYCHKK---NFLHRDIKCSNILLNNKGQIKLADFGLAR  164 (302)
T ss_pred             CcEEEEEcccCcc-HHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCcEEeCcccccc
Confidence            4789999999863 3332222222334555789999999999999998   89999999999999999999999999998


Q ss_pred             EeCCCCcceeceeeecccccCchhHH-------HHHHHhcCCCcc-eeecccccCCCCCCH-------------------
Q 045577          279 IFGDQTEEVTGRVIGTQTLKTVPELL-------QAWKLWSEGDPM-EIIDEQTKMKGPFSA-------------------  331 (392)
Q Consensus       279 ~~~~~~~~~~~~~~gt~~y~a~~~~~-------~~~diws~G~v~-~~ld~~~~~~~~~~~-------------------  331 (392)
                      ..............++..|++ ||..       .+.|+|+.|+++ +++.+++.+......                   
T Consensus       165 ~~~~~~~~~~~~~~~~~~y~~-PE~~~~~~~~~~~~Di~slG~~~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (302)
T cd07864         165 LYNSEESRPYTNKVITLWYRP-PELLLGEERYGPAIDVWSCGCILGELFTKKPIFQANQELAQLELISRLCGSPCPAVWP  243 (302)
T ss_pred             cccCCcccccccceeccCccC-hHHhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhhcc
Confidence            765322222222345777888 6543       357999999876 444443222211000                   


Q ss_pred             --------------------------HHHHHHHHHHHhhcccCcCCCCCHHHHHH
Q 045577          332 --------------------------DELVKCIEVGLLCVQQRIEDWPTMSSVLT  360 (392)
Q Consensus       332 --------------------------~~~~~~~~i~~~Cl~~dp~~RPsm~eVv~  360 (392)
                                                .....+.+++..|++.+|.+||++.++++
T Consensus       244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~  298 (302)
T cd07864         244 DVIKLPYFNTMKPKKQYRRRLREEFSFIPTPALDLLDHMLTLDPSKRCTAEEALN  298 (302)
T ss_pred             cccccccccccccccccccchhhhcCCCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence                                      01235667888999999999999998875

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely

>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5

Probab=99.73  E-value=3.1e-18  Score=161.53  Aligned_cols=157  Identities=18%  Similarity=0.148  Sum_probs=115.4

Q ss_pred             CCCeeEEecCccCCCcChhhhhhhc-cccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEcCCCCCeEeeeec
Q 045577          198 DGEVFLMFEGIKLPDKSEFTCEFEC-SKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEINPNISDFGP  276 (392)
Q Consensus       198 ~~~~~lv~e~~~~~~l~~~~~~~~~-~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~~~~~~kl~DFGl  276 (392)
                      ++..+++|||++++++......... ......+..++.|++.||.|||+.   +|+||||||+||+++.++.+||+|||+
T Consensus        72 ~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~---~iiH~dikp~Nili~~~~~~kl~Dfg~  148 (285)
T cd05632          72 KDALCLVLTIMNGGDLKFHIYNMGNPGFEEERALFYAAEILCGLEDLHRE---NTVYRDLKPENILLDDYGHIRISDLGL  148 (285)
T ss_pred             CCEEEEEEEeccCccHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecCCCHHHEEECCCCCEEEecCCc
Confidence            4568999999999988765543321 235555788999999999999998   899999999999999999999999999


Q ss_pred             eEEeCCCCcceeceeeecccccCchhHH------HHHHHhcCCCcc-eeecccccCCCCCCH------------------
Q 045577          277 ARIFGDQTEEVTGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIIDEQTKMKGPFSA------------------  331 (392)
Q Consensus       277 a~~~~~~~~~~~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld~~~~~~~~~~~------------------  331 (392)
                      +........  .....|+..|+| ||..      ...|+|+.|+++ +++.+..++......                  
T Consensus       149 ~~~~~~~~~--~~~~~g~~~~~a-PE~~~~~~~~~~~Di~slG~~l~~l~~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~  225 (285)
T cd05632         149 AVKIPEGES--IRGRVGTVGYMA-PEVLNNQRYTLSPDYWGLGCLIYEMIEGQSPFRGRKEKVKREEVDRRVLETEEVYS  225 (285)
T ss_pred             ceecCCCCc--ccCCCCCcCccC-hHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhhccccccC
Confidence            876542211  123468999999 7765      257999999876 555554443322111                  


Q ss_pred             -HHHHHHHHHHHhhcccCcCCCCC-----HHHHHH
Q 045577          332 -DELVKCIEVGLLCVQQRIEDWPT-----MSSVLT  360 (392)
Q Consensus       332 -~~~~~~~~i~~~Cl~~dp~~RPs-----m~eVv~  360 (392)
                       .....+.+++..|++.+|++||+     +.++++
T Consensus       226 ~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~  260 (285)
T cd05632         226 AKFSEEAKSICKMLLTKDPKQRLGCQEEGAGEVKR  260 (285)
T ss_pred             ccCCHHHHHHHHHHccCCHhHcCCCcccChHHHHc
Confidence             11124566788999999999999     556655

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with

>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]

Probab=99.73  E-value=2.5e-18  Score=167.82  Aligned_cols=178  Identities=21%  Similarity=0.257  Sum_probs=132.1

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhccc-cchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEE
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSK-YSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLL  263 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~~-~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll  263 (392)
                      |++.++.....-.++.+++++|||+.||+..+..+..... .....++|+.|||.||+||.+-   +++|||+.+.|+|+
T Consensus       594 hPNIveLvGVC~~DePicmI~EYmEnGDLnqFl~aheapt~~t~~~vsi~tqiasgmaYLes~---nfVHrd~a~rNcLv  670 (807)
T KOG1094|consen  594 HPNIVELLGVCVQDDPLCMITEYMENGDLNQFLSAHELPTAETAPGVSICTQIASGMAYLESL---NFVHRDLATRNCLV  670 (807)
T ss_pred             CCCeeEEEeeeecCCchHHHHHHHhcCcHHHHHHhccCcccccchhHHHHHHHHHHHHHHHhh---chhhccccccceee
Confidence            8888888877555778999999999999998766553332 3333578999999999999665   99999999999999


Q ss_pred             cCCCCCeEeeeeceEEeCCCC-cceeceeeecccccCchhHH-----HHHHHhcCCCcc---------------------
Q 045577          264 DAEINPNISDFGPARIFGDQT-EEVTGRVIGTQTLKTVPELL-----QAWKLWSEGDPM---------------------  316 (392)
Q Consensus       264 ~~~~~~kl~DFGla~~~~~~~-~~~~~~~~gt~~y~a~~~~~-----~~~diws~G~v~---------------------  316 (392)
                      ++++++||+|||+++.+..+. .....+.+-...|||.+-++     .+.|+|..|..+                     
T Consensus       671 ~~e~~iKiadfgmsR~lysg~yy~vqgr~vlpiRwmawEsillgkFttaSDvWafgvTlwE~~~~C~e~Py~~lt~e~vv  750 (807)
T KOG1094|consen  671 DGEFTIKIADFGMSRNLYSGDYYRVQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEVFMLCREQPYSQLTDEQVV  750 (807)
T ss_pred             cCcccEEecCcccccccccCCceeeecceeeeeeehhHHHHHhccccchhhhhhhHHHHHHHHHHHhhCchhhhhHHHHH
Confidence            999999999999999765332 22333455677899933332     588999998754                     


Q ss_pred             ----eeeccccc-CCCCCCHHHHHHHHHHHHhhcccCcCCCCCHHHHHHHHccC
Q 045577          317 ----EIIDEQTK-MKGPFSADELVKCIEVGLLCVQQRIEDWPTMSSVLTMLSNE  365 (392)
Q Consensus       317 ----~~ld~~~~-~~~~~~~~~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~L~~~  365 (392)
                          ++++.+.+ .....+.-+..++.+++++||..+-++||+++++...|++.
T Consensus       751 en~~~~~~~~~~~~~l~~P~~cp~~lyelml~Cw~~es~~RPsFe~lh~~lq~~  804 (807)
T KOG1094|consen  751 ENAGEFFRDQGRQVVLSRPPACPQGLYELMLRCWRRESEQRPSFEQLHLFLQED  804 (807)
T ss_pred             HhhhhhcCCCCcceeccCCCcCcHHHHHHHHHHhchhhhcCCCHHHHHHHHHHh
Confidence                11211110 01112233445777999999999999999999999998764

>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

Probab=99.73  E-value=8.9e-18  Score=157.71  Aligned_cols=170  Identities=22%  Similarity=0.298  Sum_probs=118.6

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhh--ccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeE
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFE--CSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVL  262 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~--~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIl  262 (392)
                      |++.++.....+.++..+++|||+++ ++........  ....+..+.+++.|++.||.|||+.   +++|+||||+||+
T Consensus        57 h~~i~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~h~dl~p~ni~  132 (284)
T cd07836          57 HENIVRLHDVIHTENKLMLVFEYMDK-DLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCHEN---RVLHRDLKPQNLL  132 (284)
T ss_pred             CCCEeeeeeeEeeCCcEEEEEecCCc-cHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEE
Confidence            44445555554556778999999985 4444322211  2234555788999999999999998   8999999999999


Q ss_pred             EcCCCCCeEeeeeceEEeCCCCcceeceeeecccccCchhHH-------HHHHHhcCCCcc-eeecccccCCCCCCHHH-
Q 045577          263 LDAEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELL-------QAWKLWSEGDPM-EIIDEQTKMKGPFSADE-  333 (392)
Q Consensus       263 l~~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~-------~~~diws~G~v~-~~ld~~~~~~~~~~~~~-  333 (392)
                      ++.++.+|++|||+++........ .....++..|++ ||..       ...|+|+.|+++ +++.+...+.+....+. 
T Consensus       133 ~~~~~~~~l~d~g~~~~~~~~~~~-~~~~~~~~~y~~-PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~  210 (284)
T cd07836         133 INKRGELKLADFGLARAFGIPVNT-FSNEVVTLWYRA-PDVLLGSRTYSTSIDIWSVGCIMAEMITGRPLFPGTNNEDQL  210 (284)
T ss_pred             ECCCCcEEEeecchhhhhcCCccc-cccccccccccC-hHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcHHHH
Confidence            999999999999998765422111 122456788988 6643       367999999875 55555433332221111 


Q ss_pred             -------------------------------------------HHHHHHHHHhhcccCcCCCCCHHHHHH
Q 045577          334 -------------------------------------------LVKCIEVGLLCVQQRIEDWPTMSSVLT  360 (392)
Q Consensus       334 -------------------------------------------~~~~~~i~~~Cl~~dp~~RPsm~eVv~  360 (392)
                                                                 ...+.+++..|++.+|++||++.++++
T Consensus       211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~  280 (284)
T cd07836         211 LKIFRIMGTPTESTWPGISQLPEYKPTFPRYPPQDLQQLFPHADPLGIDLLHRLLQLNPELRISAHDALQ  280 (284)
T ss_pred             HHHHHHhCCCChhhHHHHhcCchhcccccCCChHHHHHHhhhcCcHHHHHHHHHhcCCcccCCCHHHHhc
Confidence                                                       124457778999999999999998874

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.

>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]

Probab=99.73  E-value=4e-18  Score=155.36  Aligned_cols=133  Identities=25%  Similarity=0.319  Sum_probs=99.7

Q ss_pred             CCCccccccCcCC-CCCeeEEecCccCCCcChhhhh---hhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccce
Q 045577          185 SGGCKRNWEADCG-DGEVFLMFEGIKLPDKSEFTCE---FECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSN  260 (392)
Q Consensus       185 s~GCvR~~~l~C~-~~~~~lv~e~~~~~~l~~~~~~---~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~N  260 (392)
                      |++.+......-+ +..+++++||.+.+.+.-....   ..-......+..|+.||..|+.|||++   -|+||||||+|
T Consensus        86 h~nvi~Lv~Vfl~~d~~v~l~fdYAEhDL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~N---WvlHRDLKPaN  162 (438)
T KOG0666|consen   86 HPNVISLVKVFLSHDKKVWLLFDYAEHDLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHSN---WVLHRDLKPAN  162 (438)
T ss_pred             CCcchhHHHHHhccCceEEEEehhhhhhHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhhh---heeeccCCcce
Confidence            6666666555543 6779999999997554331111   112336666899999999999999999   89999999999


Q ss_pred             eEEcCC----CCCeEeeeeceEEeCCCCc--ceeceeeecccccCchhHH-------HHHHHhcCCCcc-eeecc
Q 045577          261 VLLDAE----INPNISDFGPARIFGDQTE--EVTGRVIGTQTLKTVPELL-------QAWKLWSEGDPM-EIIDE  321 (392)
Q Consensus       261 Ill~~~----~~~kl~DFGla~~~~~~~~--~~~~~~~gt~~y~a~~~~~-------~~~diws~G~v~-~~ld~  321 (392)
                      ||+..+    |.+||+|||+++.+.+...  .....++-|..|.| ||++       .+.|+|+.||++ |++..
T Consensus       163 IlvmgdgperG~VKIaDlGlaR~~~~plkpl~s~d~VVVTiWYRA-PELLLGa~hYT~AiDvWAiGCIfaElLtl  236 (438)
T KOG0666|consen  163 ILVMGDGPERGRVKIADLGLARLFNNPLKPLASLDPVVVTIWYRA-PELLLGARHYTKAIDVWAIGCIFAELLTL  236 (438)
T ss_pred             EEEeccCCccCeeEeecccHHHHhhccccccccCCceEEEEEecC-hHHhcccccccchhhhHHHHHHHHHHHcc
Confidence            999877    8899999999998863322  23345788999999 6655       478999999987 44433

>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

Probab=99.72  E-value=4.9e-18  Score=159.47  Aligned_cols=170  Identities=21%  Similarity=0.308  Sum_probs=119.9

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhh-ccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEE
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFE-CSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLL  263 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~-~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll  263 (392)
                      |++.++.......++..|++|||+.. ++........ ....+..+..++.|+++||.|||+.   +++|+||+|+||++
T Consensus        57 ~~~iv~~~~~~~~~~~~~iv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~lH~~---~~~H~dl~p~nil~  132 (283)
T cd07835          57 HPNIVRLLDVVHSENKLYLVFEFLDL-DLKKYMDSSPLTGLDPPLIKSYLYQLLQGIAYCHSH---RVLHRDLKPQNLLI  132 (283)
T ss_pred             CCCccCHhheeccCCeEEEEEeccCc-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCHHHEEE
Confidence            55566555555556789999999964 5554433322 1234555788999999999999998   89999999999999


Q ss_pred             cCCCCCeEeeeeceEEeCCCCcceeceeeecccccCchhHH-------HHHHHhcCCCcc-eeecccccCCCCCCHH---
Q 045577          264 DAEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELL-------QAWKLWSEGDPM-EIIDEQTKMKGPFSAD---  332 (392)
Q Consensus       264 ~~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~-------~~~diws~G~v~-~~ld~~~~~~~~~~~~---  332 (392)
                      +.++.+||+|||+++........ .....++..|+| ||..       ...|+|+.|+++ +++.+.+.+....+.+   
T Consensus       133 ~~~~~~~l~df~~~~~~~~~~~~-~~~~~~~~~~~a-PE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~  210 (283)
T cd07835         133 DREGALKLADFGLARAFGVPVRT-YTHEVVTLWYRA-PEILLGSRQYSTPVDIWSIGCIFAEMVNRRPLFPGDSEIDQLF  210 (283)
T ss_pred             cCCCcEEEeecccccccCCCccc-cCccccccCCCC-CceeecCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHH
Confidence            99999999999998765422111 122345778888 6532       368999999876 4555543332211100   


Q ss_pred             -----------------------------------------HHHHHHHHHHhhcccCcCCCCCHHHHHH
Q 045577          333 -----------------------------------------ELVKCIEVGLLCVQQRIEDWPTMSSVLT  360 (392)
Q Consensus       333 -----------------------------------------~~~~~~~i~~~Cl~~dp~~RPsm~eVv~  360 (392)
                                                               ....+.+++.+|++.+|++||++.++++
T Consensus       211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~  279 (283)
T cd07835         211 RIFRTLGTPDEDVWPGVTSLPDYKPTFPKWARQDLSKVVPNLDEDGLDLLSKMLVYDPAKRISAKAALQ  279 (283)
T ss_pred             HHHHHhCCCChHHhhhhhhchhhhhhcccccccchhhhcCCCCHHHHHHHHHHhcCChhhCcCHHHHhc
Confidence                                                     0134667888999999999999999875

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc

>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases

Probab=99.72  E-value=3.9e-18  Score=162.62  Aligned_cols=157  Identities=23%  Similarity=0.280  Sum_probs=110.3

Q ss_pred             CCeeEEecCccCCCcChhhhhh----hccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEcC----CCCCe
Q 045577          199 GEVFLMFEGIKLPDKSEFTCEF----ECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDA----EINPN  270 (392)
Q Consensus       199 ~~~~lv~e~~~~~~l~~~~~~~----~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~~----~~~~k  270 (392)
                      ...|+||||++.... ......    ........+..++.|++.||.|||+.   +++||||||+||+++.    ++.+|
T Consensus        77 ~~~~lv~e~~~~~l~-~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~h~dlkp~Nil~~~~~~~~~~~k  152 (316)
T cd07842          77 KSVYLLFDYAEHDLW-QIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHSN---WVLHRDLKPANILVMGEGPERGVVK  152 (316)
T ss_pred             ceEEEEEeCCCcCHH-HHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHhC---CEeeCCCCHHHEEEcCCCCccceEE
Confidence            568999999985433 221111    11224555788999999999999998   8999999999999999    89999


Q ss_pred             EeeeeceEEeCCCCc--ceeceeeecccccCchhHH-------HHHHHhcCCCcc-eeecccccCCCCCCH---------
Q 045577          271 ISDFGPARIFGDQTE--EVTGRVIGTQTLKTVPELL-------QAWKLWSEGDPM-EIIDEQTKMKGPFSA---------  331 (392)
Q Consensus       271 l~DFGla~~~~~~~~--~~~~~~~gt~~y~a~~~~~-------~~~diws~G~v~-~~ld~~~~~~~~~~~---------  331 (392)
                      |+|||+++.......  .......++..|+| ||..       ...|+|+.|+++ +++.+.+.+.+....         
T Consensus       153 l~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~a-PE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~  231 (316)
T cd07842         153 IGDLGLARLFNAPLKPLADLDPVVVTIWYRA-PELLLGARHYTKAIDIWAIGCIFAELLTLEPIFKGREAKIKKSNPFQR  231 (316)
T ss_pred             ECCCccccccCCCcccccccCCccccccccC-HHHHhCCCCCCcHHHHHHHHHHHHHHHhcCCCCcCCcccccccchhHH
Confidence            999999987642211  12223567888999 6643       357999999876 444443332211000         


Q ss_pred             ----------------------------------------------------HHHHHHHHHHHhhcccCcCCCCCHHHHH
Q 045577          332 ----------------------------------------------------DELVKCIEVGLLCVQQRIEDWPTMSSVL  359 (392)
Q Consensus       332 ----------------------------------------------------~~~~~~~~i~~~Cl~~dp~~RPsm~eVv  359 (392)
                                                                          ....++.+++.+|++.+|++|||+.+++
T Consensus       232 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~eil  311 (316)
T cd07842         232 DQLERIFEVLGTPTEKDWPDIKKMPEYDTLMKDFKTKTYPSNSLAKWMEKHKKPDSQGFDLLRKLLEYDPTKRITAEEAL  311 (316)
T ss_pred             HHHHHHHHHhCCCchhHHHHHhhcccchhhhhhccCCCCCCccHHHHHHhccCCCHHHHHHHHHHhcCCcccCcCHHHHh
Confidence                                                                1112466788899999999999999987


Q ss_pred             H
Q 045577          360 T  360 (392)
Q Consensus       360 ~  360 (392)
                      +
T Consensus       312 ~  312 (316)
T cd07842         312 E  312 (316)
T ss_pred             c
Confidence            5

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the

>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

Probab=99.72  E-value=2.8e-18  Score=161.58  Aligned_cols=171  Identities=18%  Similarity=0.191  Sum_probs=122.9

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEc
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLD  264 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~  264 (392)
                      |++.++........+..+++|||++++++.....+.. ......+..++.+++.||.|||+.+  +++|+||||+||+++
T Consensus        62 h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~i~~~l~~LH~~~--~i~H~dl~p~nil~~  138 (284)
T cd06620          62 SPYIVSFYGAFLNENNICMCMEFMDCGSLDRIYKKGG-PIPVEILGKIAVAVVEGLTYLYNVH--RIMHRDIKPSNILVN  138 (284)
T ss_pred             CCCcceEeeeEecCCEEEEEEecCCCCCHHHHHHhcc-CCCHHHHHHHHHHHHHHHHHHHHhc--CeeccCCCHHHEEEC
Confidence            4455554444444567899999999999876544322 2344557889999999999999733  799999999999999


Q ss_pred             CCCCCeEeeeeceEEeCCCCcceeceeeecccccCchhHH------HHHHHhcCCCcc-eeecccccCCCCCC-------
Q 045577          265 AEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIIDEQTKMKGPFS-------  330 (392)
Q Consensus       265 ~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld~~~~~~~~~~-------  330 (392)
                      .++.++|+|||++......   ......|+..|++ ||..      ...|+|+.|+++ +++.+..++.....       
T Consensus       139 ~~~~~~l~d~gl~~~~~~~---~~~~~~~~~~~~a-PE~~~~~~~~~~~Di~slG~~l~~l~tg~~p~~~~~~~~~~~~~  214 (284)
T cd06620         139 SRGQIKLCDFGVSGELINS---IADTFVGTSTYMS-PERIQGGKYTVKSDVWSLGISIIELALGKFPFAFSNIDDDGQDD  214 (284)
T ss_pred             CCCcEEEccCCcccchhhh---ccCccccCcccCC-HHHHccCCCCccchHHHHHHHHHHHHhCCCCCcccchhhhhhhh
Confidence            9999999999998654321   1223568889999 6654      367999999876 45544333321111       


Q ss_pred             --------------------H-HHHHHHHHHHHhhcccCcCCCCCHHHHHHHH
Q 045577          331 --------------------A-DELVKCIEVGLLCVQQRIEDWPTMSSVLTML  362 (392)
Q Consensus       331 --------------------~-~~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~L  362 (392)
                                          . +....+.+++.+|++.+|++||++.+|+++.
T Consensus       215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~e~~~~~  267 (284)
T cd06620         215 PMGILDLLQQIVQEPPPRLPSSDFPEDLRDFVDACLLKDPTERPTPQQLCAMP  267 (284)
T ss_pred             hhHHHHHHHHHhhccCCCCCchhcCHHHHHHHHHHhcCCcccCcCHHHHhcCc
Confidence                                0 1223566788899999999999999999874

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5

Probab=99.72  E-value=2.1e-18  Score=162.09  Aligned_cols=164  Identities=16%  Similarity=0.198  Sum_probs=116.9

Q ss_pred             CCccccccCcCCCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEcC
Q 045577          186 GGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDA  265 (392)
Q Consensus       186 ~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~~  265 (392)
                      ++.++.....+..+..+++|||++++++....     ......+..++.|++.||.|||+.   +++|+||||+||+++.
T Consensus        59 ~~iv~~~~~~~~~~~~~lv~e~~~~~~l~~~~-----~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nill~~  130 (279)
T cd06619          59 PYIIGFYGAFFVENRISICTEFMDGGSLDVYR-----KIPEHVLGRIAVAVVKGLTYLWSL---KILHRDVKPSNMLVNT  130 (279)
T ss_pred             CCeeeEEEEEEECCEEEEEEecCCCCChHHhh-----cCCHHHHHHHHHHHHHHHHHHHHC---CEeeCCCCHHHEEECC
Confidence            33344333333356789999999998875431     123334678999999999999998   8999999999999999


Q ss_pred             CCCCeEeeeeceEEeCCCCcceeceeeecccccCchhHH------HHHHHhcCCCcc-eeecccccCCCCC---------
Q 045577          266 EINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIIDEQTKMKGPF---------  329 (392)
Q Consensus       266 ~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld~~~~~~~~~---------  329 (392)
                      ++.+||+|||++......   ......|+..|+| ||..      .+.|+|+.|+++ +++.+..++....         
T Consensus       131 ~~~~~l~dfg~~~~~~~~---~~~~~~~~~~y~a-PE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~  206 (279)
T cd06619         131 RGQVKLCDFGVSTQLVNS---IAKTYVGTNAYMA-PERISGEQYGIHSDVWSLGISFMELALGRFPYPQIQKNQGSLMPL  206 (279)
T ss_pred             CCCEEEeeCCcceecccc---cccCCCCChhhcC-ceeecCCCCCCcchHHHHHHHHHHHHhCCCCchhhcccccccchH
Confidence            999999999999765422   1223568889999 6643      367999999876 4444432221100         


Q ss_pred             ---------------CHHHHHHHHHHHHhhcccCcCCCCCHHHHHHH
Q 045577          330 ---------------SADELVKCIEVGLLCVQQRIEDWPTMSSVLTM  361 (392)
Q Consensus       330 ---------------~~~~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~  361 (392)
                                     .......+.+++..|++.+|++||++.++++.
T Consensus       207 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~eil~~  253 (279)
T cd06619         207 QLLQCIVDEDPPVLPVGQFSEKFVHFITQCMRKQPKERPAPENLMDH  253 (279)
T ss_pred             HHHHHHhccCCCCCCCCcCCHHHHHHHHHHhhCChhhCCCHHHHhcC
Confidence                           00112346678889999999999999998865

Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p

>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]

Probab=99.72  E-value=5.9e-18  Score=166.65  Aligned_cols=170  Identities=17%  Similarity=0.250  Sum_probs=131.9

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEc
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLD  264 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~  264 (392)
                      |++.+|.++.--....+|+||||+.+++++.+..+..-... +.+..+..|+.+|++|||++   .|+|||||.+||||+
T Consensus       114 HPnIvkl~~v~~t~~~lylV~eya~~ge~~~yl~~~gr~~e-~~ar~~F~q~vsaveYcH~k---~ivHrdLk~eNilL~  189 (596)
T KOG0586|consen  114 HPNIVKLFSVIETEATLYLVMEYASGGELFDYLVKHGRMKE-KEARAKFRQIVSAVEYCHSK---NIVHRDLKAENILLD  189 (596)
T ss_pred             CcceeeeeeeeeecceeEEEEEeccCchhHHHHHhcccchh-hhhhhhhHHHHHHHHHHhhc---ceeccccchhhcccc
Confidence            88888887766556789999999999999887766655555 55778899999999999999   899999999999999


Q ss_pred             CCCCCeEeeeeceEEeCCCCcceeceeeecccccCchhHHH-------HHHHhcCCCccee-ecccccCCCCCCHH----
Q 045577          265 AEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELLQ-------AWKLWSEGDPMEI-IDEQTKMKGPFSAD----  332 (392)
Q Consensus       265 ~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~~-------~~diws~G~v~~~-ld~~~~~~~~~~~~----  332 (392)
                      .+..+||+|||++..+.  ......+.+|++.|.| ||+..       ..|+|++|.+++. +.+..++.+..-.+    
T Consensus       190 ~~mnikIaDfgfS~~~~--~~~~lqt~cgsppyAa-PEl~~g~~y~gpe~D~Wslgvvly~LV~GsLPFDG~~lk~Lr~r  266 (596)
T KOG0586|consen  190 ENMNIKIADFGFSTFFD--YGLMLQTFCGSPPYAA-PELFNGKKYDGPEVDIWSLGVVLYALVEGSLPFDGQNLKELRPR  266 (596)
T ss_pred             cccceeeeccccceeec--ccccccccCCCCCccC-hHhhcCcccCCcceehhhhhhhheeeeecccccCCcccccccch
Confidence            99999999999998875  2334445789999999 77654       5699999998853 34433332221111    


Q ss_pred             -----------HHHHHHHHHHhhcccCcCCCCCHHHHHHH
Q 045577          333 -----------ELVKCIEVGLLCVQQRIEDWPTMSSVLTM  361 (392)
Q Consensus       333 -----------~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~  361 (392)
                                 -...+-+++...+-.+|.+|+++.++...
T Consensus       267 vl~gk~rIp~~ms~dce~lLrk~lvl~Pskr~~~dqim~~  306 (596)
T KOG0586|consen  267 VLRGKYRIPFYMSCDCEDLLRKFLVLNPSKRGPCDQIMKD  306 (596)
T ss_pred             heeeeecccceeechhHHHHHHhhccCccccCCHHHhhhh
Confidence                       11145567778899999999999998865

>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6

Probab=99.72  E-value=4.7e-18  Score=159.62  Aligned_cols=158  Identities=21%  Similarity=0.286  Sum_probs=115.0

Q ss_pred             CCCeeEEecCccCCCcChhhhhhh-ccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEcCCCCCeEeeeec
Q 045577          198 DGEVFLMFEGIKLPDKSEFTCEFE-CSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEINPNISDFGP  276 (392)
Q Consensus       198 ~~~~~lv~e~~~~~~l~~~~~~~~-~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~~~~~~kl~DFGl  276 (392)
                      +...|++|||+.++++........ ....+..+..++.|++.||.|||+.   +++|+|+||+||+++.++.+||+|||+
T Consensus        91 ~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~---~ivH~dl~~~nili~~~~~~~l~dfg~  167 (282)
T cd06636          91 DDQLWLVMEFCGAGSVTDLVKNTKGNALKEDWIAYICREILRGLAHLHAH---KVIHRDIKGQNVLLTENAEVKLVDFGV  167 (282)
T ss_pred             CCEEEEEEEeCCCCcHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEeeCcc
Confidence            356799999999988877554432 2234455678899999999999998   899999999999999999999999999


Q ss_pred             eEEeCCCCcceeceeeecccccCchhHH-----------HHHHHhcCCCcc-eeecccccCCCCCCH-------------
Q 045577          277 ARIFGDQTEEVTGRVIGTQTLKTVPELL-----------QAWKLWSEGDPM-EIIDEQTKMKGPFSA-------------  331 (392)
Q Consensus       277 a~~~~~~~~~~~~~~~gt~~y~a~~~~~-----------~~~diws~G~v~-~~ld~~~~~~~~~~~-------------  331 (392)
                      +........ ......|+..|+| ||..           ...|+|+.|+++ +++.+..++....+.             
T Consensus       168 ~~~~~~~~~-~~~~~~~~~~y~a-PE~l~~~~~~~~~~~~~~DvwslG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~  245 (282)
T cd06636         168 SAQLDRTVG-RRNTFIGTPYWMA-PEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPLCDMHPMRALFLIPRNPPPK  245 (282)
T ss_pred             hhhhhcccc-CCCcccccccccC-HhhcCcccCcCcCCCcccchhHHHHHHHHHHhCCCCccccCHHhhhhhHhhCCCCC
Confidence            875432111 1223568889999 6653           257999999876 444443332111110             


Q ss_pred             ----HHHHHHHHHHHhhcccCcCCCCCHHHHHH
Q 045577          332 ----DELVKCIEVGLLCVQQRIEDWPTMSSVLT  360 (392)
Q Consensus       332 ----~~~~~~~~i~~~Cl~~dp~~RPsm~eVv~  360 (392)
                          .....+.+++..|++.+|.+||++.++++
T Consensus       246 ~~~~~~~~~~~~li~~cl~~~p~~Rp~~~ell~  278 (282)
T cd06636         246 LKSKKWSKKFIDFIEGCLVKNYLSRPSTEQLLK  278 (282)
T ss_pred             CcccccCHHHHHHHHHHhCCChhhCcCHHHHhc
Confidence                11235677888999999999999998864

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea

>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

Probab=99.72  E-value=4.3e-18  Score=158.10  Aligned_cols=170  Identities=19%  Similarity=0.267  Sum_probs=121.6

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCc-CCCCceeecccccceeEE
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPE-DSRLEIIHRDHKTSNVLL  263 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~-~~~~~iiHrDlKp~NIll  263 (392)
                      |++.++.......++..++++||++++++...............+..++.|++.||.|||+ .   +++|+||||+||++
T Consensus        58 ~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~---~i~H~dl~~~ni~~  134 (265)
T cd06605          58 SPYIVGFYGAFYNNGDISICMEYMDGGSLDKILKEVQGRIPERILGKIAVAVLKGLTYLHEKH---KIIHRDVKPSNILV  134 (265)
T ss_pred             CCchhhhheeeecCCEEEEEEEecCCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHcCCC---CeecCCCCHHHEEE
Confidence            4444444444444567899999999888877554432333455577899999999999999 6   89999999999999


Q ss_pred             cCCCCCeEeeeeceEEeCCCCcceeceeeecccccCchhHH------HHHHHhcCCCcc-eeecccccCCCC--------
Q 045577          264 DAEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIIDEQTKMKGP--------  328 (392)
Q Consensus       264 ~~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld~~~~~~~~--------  328 (392)
                      +.++.+||+|||.+........   ....++..|++ ||..      ...|+|+.|+++ +++.+..++...        
T Consensus       135 ~~~~~~~l~d~g~~~~~~~~~~---~~~~~~~~y~~-PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~  210 (265)
T cd06605         135 NSRGQIKLCDFGVSGQLVNSLA---KTFVGTSSYMA-PERIQGNDYSVKSDIWSLGLSLIELATGRFPYPPENDPPDGIF  210 (265)
T ss_pred             CCCCCEEEeecccchhhHHHHh---hcccCChhccC-HHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCccccccccHH
Confidence            9999999999999865432111   11567888999 7654      368999999876 444443232211        


Q ss_pred             -------------CCHH-HHHHHHHHHHhhcccCcCCCCCHHHHHHH
Q 045577          329 -------------FSAD-ELVKCIEVGLLCVQQRIEDWPTMSSVLTM  361 (392)
Q Consensus       329 -------------~~~~-~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~  361 (392)
                                   .... ....+.+++..|+..+|++||++.+++..
T Consensus       211 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~  257 (265)
T cd06605         211 ELLQYIVNEPPPRLPSGKFSPDFQDFVNLCLIKDPRERPSYKELLEH  257 (265)
T ss_pred             HHHHHHhcCCCCCCChhhcCHHHHHHHHHHcCCCchhCcCHHHHhhC
Confidence                         0001 12346678889999999999999998753

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity

>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

Probab=99.72  E-value=5.7e-18  Score=156.36  Aligned_cols=169  Identities=18%  Similarity=0.231  Sum_probs=121.3

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEc
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLD  264 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~  264 (392)
                      |++.++.......+...|+++||++++++.....+. +...+..+..++.|++.||.|||+.   +++|+||+|+||+++
T Consensus        61 h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~~~ni~~~  136 (258)
T cd06632          61 HPNIVQYLGTEREEDNLYIFLELVPGGSLAKLLKKY-GSFPEPVIRLYTRQILLGLEYLHDR---NTVHRDIKGANILVD  136 (258)
T ss_pred             CCCchheeeeEecCCeEEEEEEecCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEC
Confidence            445555444444456789999999998887654433 2234455778899999999999998   899999999999999


Q ss_pred             CCCCCeEeeeeceEEeCCCCcceeceeeecccccCchhHH-------HHHHHhcCCCcc-eeecccccCCCCCCH-----
Q 045577          265 AEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELL-------QAWKLWSEGDPM-EIIDEQTKMKGPFSA-----  331 (392)
Q Consensus       265 ~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~-------~~~diws~G~v~-~~ld~~~~~~~~~~~-----  331 (392)
                      .++.+||+|||++.......  ......|+..|++ ||..       ...|+|+.|+++ +++.+..++......     
T Consensus       137 ~~~~~kl~d~~~~~~~~~~~--~~~~~~~~~~y~~-pe~~~~~~~~~~~~D~~slG~~l~~l~~g~~pf~~~~~~~~~~~  213 (258)
T cd06632         137 TNGVVKLADFGMAKQVVEFS--FAKSFKGSPYWMA-PEVIAQQGGYGLAADIWSLGCTVLEMATGKPPWSQLEGVAAVFK  213 (258)
T ss_pred             CCCCEEEccCccceeccccc--cccccCCCcceeC-HHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcccCcHHHHHHH
Confidence            99999999999988754222  2233567888988 5533       368999999865 555543333221111     


Q ss_pred             ------------HHHHHHHHHHHhhcccCcCCCCCHHHHHH
Q 045577          332 ------------DELVKCIEVGLLCVQQRIEDWPTMSSVLT  360 (392)
Q Consensus       332 ------------~~~~~~~~i~~~Cl~~dp~~RPsm~eVv~  360 (392)
                                  .....+.+++.+|++.+|++||++.+++.
T Consensus       214 ~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~  254 (258)
T cd06632         214 IGRSKELPPIPDHLSDEAKDFILKCLQRDPSLRPTAAELLE  254 (258)
T ss_pred             HHhcccCCCcCCCcCHHHHHHHHHHhhcCcccCcCHHHHhc
Confidence                        11234566788999999999999999875

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops

>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase

Probab=99.72  E-value=6.7e-18  Score=159.44  Aligned_cols=170  Identities=18%  Similarity=0.236  Sum_probs=113.9

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEc
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLD  264 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~  264 (392)
                      |++.++.....+.++..|++|||+.+ ++...............+..++.|++.||.|||+.   +++|+||||+||+++
T Consensus        62 h~ni~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dlkp~Nil~~  137 (291)
T cd07870          62 HANIVLLHDIIHTKETLTFVFEYMHT-DLAQYMIQHPGGLHPYNVRLFMFQLLRGLAYIHGQ---HILHRDLKPQNLLIS  137 (291)
T ss_pred             CCCEeEEEEEEecCCeEEEEEecccC-CHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChHHEEEc
Confidence            33444333333445678999999974 44333222222233445678899999999999998   899999999999999


Q ss_pred             CCCCCeEeeeeceEEeCCCCcceeceeeecccccCchhHH-------HHHHHhcCCCcc-eeecccccCCCCCCH-----
Q 045577          265 AEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELL-------QAWKLWSEGDPM-EIIDEQTKMKGPFSA-----  331 (392)
Q Consensus       265 ~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~-------~~~diws~G~v~-~~ld~~~~~~~~~~~-----  331 (392)
                      .++.+||+|||+++........ .....++..|++ ||..       ...|+|+.|+++ +++.+...+....+.     
T Consensus       138 ~~~~~~l~Dfg~~~~~~~~~~~-~~~~~~~~~y~a-PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~f~~~~~~~~~~~  215 (291)
T cd07870         138 YLGELKLADFGLARAKSIPSQT-YSSEVVTLWYRP-PDVLLGATDYSSALDIWGAGCIFIEMLQGQPAFPGVSDVFEQLE  215 (291)
T ss_pred             CCCcEEEeccccccccCCCCCC-CCCccccccccC-CceeecCCCCCcHHHHHHHHHHHHHHHhCCCCCCCchhHHHHHH
Confidence            9999999999998764321111 122356788998 5543       357999999876 454443332211100     


Q ss_pred             -------------------------------------------HHHHHHHHHHHhhcccCcCCCCCHHHHHH
Q 045577          332 -------------------------------------------DELVKCIEVGLLCVQQRIEDWPTMSSVLT  360 (392)
Q Consensus       332 -------------------------------------------~~~~~~~~i~~~Cl~~dp~~RPsm~eVv~  360 (392)
                                                                 .....+.+++.+|++.||.+|||+.+++.
T Consensus       216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~~~l~  287 (291)
T cd07870         216 KIWTVLGVPTEDTWPGVSKLPNYKPEWFLPCKPQQLRVVWKRLSRPPKAEDLASQMLMMFPKDRISAQDALL  287 (291)
T ss_pred             HHHHHcCCCChhhhhhhhhcccccchhccccCCcchhhhccccCCChHHHHHHHHHhCcCcccCcCHHHHhc
Confidence                                                       00124456778999999999999998764

Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess

>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

Probab=99.72  E-value=6.5e-18  Score=158.15  Aligned_cols=157  Identities=17%  Similarity=0.268  Sum_probs=116.8

Q ss_pred             CCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEcCCCCCeEeeeece
Q 045577          198 DGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEINPNISDFGPA  277 (392)
Q Consensus       198 ~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~~~~~~kl~DFGla  277 (392)
                      +...|++|||++++++.......  ...+..+..++.|++.||.|||+.   +++|+||+|+||+++.++.++|+|||++
T Consensus        74 ~~~~~lv~e~~~~~~L~~~~~~~--~l~~~~~~~i~~~i~~~l~~lh~~---~i~H~dl~p~ni~i~~~~~~~l~dfg~~  148 (277)
T cd06917          74 GPRLWIIMEYAEGGSVRTLMKAG--PIAEKYISVIIREVLVALKYIHKV---GVIHRDIKAANILVTNTGNVKLCDFGVA  148 (277)
T ss_pred             CCEEEEEEecCCCCcHHHHHHcc--CCCHHHHHHHHHHHHHHHHHHHhC---CcccCCcCHHHEEEcCCCCEEEccCCce
Confidence            45689999999999887654332  334555788999999999999998   8999999999999999999999999999


Q ss_pred             EEeCCCCcceeceeeecccccCchhHH-------HHHHHhcCCCcc-eeecccccCCCCC----------------CH-H
Q 045577          278 RIFGDQTEEVTGRVIGTQTLKTVPELL-------QAWKLWSEGDPM-EIIDEQTKMKGPF----------------SA-D  332 (392)
Q Consensus       278 ~~~~~~~~~~~~~~~gt~~y~a~~~~~-------~~~diws~G~v~-~~ld~~~~~~~~~----------------~~-~  332 (392)
                      ........ ......|+..|++ ||..       ...|+|+.|+++ +++.+..++....                .. .
T Consensus       149 ~~~~~~~~-~~~~~~~~~~y~a-PE~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~  226 (277)
T cd06917         149 ALLNQNSS-KRSTFVGTPYWMA-PEVITEGKYYDTKADIWSLGITIYEMATGNPPYSDVDAFRAMMLIPKSKPPRLEDNG  226 (277)
T ss_pred             eecCCCcc-ccccccCCcceeC-HHHhccCCccccchhHHHHHHHHHHHHhCCCCCCCCChhhhhhccccCCCCCCCccc
Confidence            87653221 1223468888999 6653       358999999876 4444433321111                11 1


Q ss_pred             HHHHHHHHHHhhcccCcCCCCCHHHHHHH
Q 045577          333 ELVKCIEVGLLCVQQRIEDWPTMSSVLTM  361 (392)
Q Consensus       333 ~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~  361 (392)
                      ....+.+++..|++.+|++||++.+++..
T Consensus       227 ~~~~~~~~i~~~l~~~p~~R~~~~~il~~  255 (277)
T cd06917         227 YSKLLREFVAACLDEEPKERLSAEELLKS  255 (277)
T ss_pred             CCHHHHHHHHHHcCCCcccCcCHHHHhhC
Confidence            23456778889999999999999999764

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent

>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9

Probab=99.72  E-value=7.9e-18  Score=159.98  Aligned_cols=158  Identities=20%  Similarity=0.288  Sum_probs=111.8

Q ss_pred             CCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEcCCCCCeEeeeece
Q 045577          198 DGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEINPNISDFGPA  277 (392)
Q Consensus       198 ~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~~~~~~kl~DFGla  277 (392)
                      .+..|++|||+.+ ++...............+..++.|++.||.|||+.   +++|+||||+||+++.++.+||+|||++
T Consensus        91 ~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~i~H~dl~p~nil~~~~~~~kl~dfg~~  166 (310)
T cd07865          91 KGSFYLVFEFCEH-DLAGLLSNKNVKFTLSEIKKVMKMLLNGLYYIHRN---KILHRDMKAANILITKDGILKLADFGLA  166 (310)
T ss_pred             CceEEEEEcCCCc-CHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEECCCCcEEECcCCCc
Confidence            3467999999975 44444333333345556789999999999999998   8999999999999999999999999999


Q ss_pred             EEeCCCCc---ceeceeeecccccCchhHH-------HHHHHhcCCCcc-eeecccccCCCCCCHH--------------
Q 045577          278 RIFGDQTE---EVTGRVIGTQTLKTVPELL-------QAWKLWSEGDPM-EIIDEQTKMKGPFSAD--------------  332 (392)
Q Consensus       278 ~~~~~~~~---~~~~~~~gt~~y~a~~~~~-------~~~diws~G~v~-~~ld~~~~~~~~~~~~--------------  332 (392)
                      ........   .......++..|+| ||..       .+.|+|+.|+++ +++.+.+.+.+.....              
T Consensus       167 ~~~~~~~~~~~~~~~~~~~~~~y~a-PE~~~~~~~~~~~~Di~slG~~l~el~t~~~~~~~~~~~~~~~~~~~~~~~~~~  245 (310)
T cd07865         167 RAFSLSKNSKPNRYTNRVVTLWYRP-PELLLGERDYGPPIDMWGAGCIMAEMWTRSPIMQGNTEQHQLTLISQLCGSITP  245 (310)
T ss_pred             ccccCCcccCCCCccCcccCccccC-cHHhcCCcccCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCh
Confidence            87642111   11123456788999 6643       368999999876 4444322221111000              


Q ss_pred             ---------------------------------HHHHHHHHHHhhcccCcCCCCCHHHHHH
Q 045577          333 ---------------------------------ELVKCIEVGLLCVQQRIEDWPTMSSVLT  360 (392)
Q Consensus       333 ---------------------------------~~~~~~~i~~~Cl~~dp~~RPsm~eVv~  360 (392)
                                                       +...+.+++..|++.+|++||++.++++
T Consensus       246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~dli~~~l~~~P~~R~t~~e~l~  306 (310)
T cd07865         246 EVWPGVDKLELFKKMELPQGQKRKVKERLKPYVKDPHALDLIDKLLVLDPAKRIDADTALN  306 (310)
T ss_pred             hhcccccchhhhhhccCCCccchhhHHhcccccCCHHHHHHHHHHhcCChhhccCHHHHhc
Confidence                                             0123457888999999999999999875

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl

>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

Probab=99.72  E-value=4.1e-18  Score=160.67  Aligned_cols=164  Identities=21%  Similarity=0.194  Sum_probs=119.6

Q ss_pred             CCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEcCCCCCeEeeeec
Q 045577          197 GDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEINPNISDFGP  276 (392)
Q Consensus       197 ~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~~~~~~kl~DFGl  276 (392)
                      .+...+++|||+.++++....+..... ....+..++.|+++||.|||+.   +++|+||||.||+++.++.++|+|||+
T Consensus        76 ~~~~~~lv~e~~~~~~L~~~~~~~~~~-~~~~~~~~~~ql~~~l~~lH~~---~~~H~dl~p~nil~~~~~~~~l~dfg~  151 (288)
T cd05583          76 TDTKLHLILDYVNGGELFTHLYQREHF-TESEVRVYIAEIVLALDHLHQL---GIIYRDIKLENILLDSEGHVVLTDFGL  151 (288)
T ss_pred             cCCEEEEEEecCCCCcHHHHHhhcCCc-CHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHeEECCCCCEEEEECcc
Confidence            346689999999999887766554332 3444778899999999999997   899999999999999999999999999


Q ss_pred             eEEeCCCCcceeceeeecccccCchhHH--------HHHHHhcCCCcc-eeecccccCCCC--C-CHHH-----------
Q 045577          277 ARIFGDQTEEVTGRVIGTQTLKTVPELL--------QAWKLWSEGDPM-EIIDEQTKMKGP--F-SADE-----------  333 (392)
Q Consensus       277 a~~~~~~~~~~~~~~~gt~~y~a~~~~~--------~~~diws~G~v~-~~ld~~~~~~~~--~-~~~~-----------  333 (392)
                      ++.+............|+..|++ ||..        ...|+|+.|+++ +++.+...+...  . ...+           
T Consensus       152 ~~~~~~~~~~~~~~~~~~~~y~a-PE~~~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~  230 (288)
T cd05583         152 SKEFLAEEEERAYSFCGTIEYMA-PEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPFTVDGEQNSQSEISRRILKSKPP  230 (288)
T ss_pred             ccccccccccccccccCCccccC-HHHhcCCCCCCcchhhhHHHHHHHHHHHhCCCCcccCcccchHHHHHHHHHccCCC
Confidence            87654222222223457888998 6643        367999999876 555543332211  0 0011           


Q ss_pred             -----HHHHHHHHHhhcccCcCCCCCHHHHHHHHccC
Q 045577          334 -----LVKCIEVGLLCVQQRIEDWPTMSSVLTMLSNE  365 (392)
Q Consensus       334 -----~~~~~~i~~~Cl~~dp~~RPsm~eVv~~L~~~  365 (392)
                           ...+.+++.+|++.+|++|||+.++.+.|+..
T Consensus       231 ~~~~~~~~l~~li~~~l~~~p~~R~t~~~~~~~l~~~  267 (288)
T cd05583         231 FPKTMSAEARDFIQKLLEKDPKKRLGANGADEIKNHP  267 (288)
T ss_pred             CCcccCHHHHHHHHHHhcCCHhhccCcchHHHHhcCc
Confidence                 12456677899999999999999998888653

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines

>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase

Probab=99.72  E-value=1.3e-17  Score=157.52  Aligned_cols=154  Identities=21%  Similarity=0.273  Sum_probs=109.8

Q ss_pred             eeEEecCccCCCcChhhhhhh----ccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEcC-CCCCeEeeee
Q 045577          201 VFLMFEGIKLPDKSEFTCEFE----CSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDA-EINPNISDFG  275 (392)
Q Consensus       201 ~~lv~e~~~~~~l~~~~~~~~----~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~~-~~~~kl~DFG  275 (392)
                      .|++|||+++ ++........    .......+..++.||+.||.|||+.   +++||||||+||+++. ++.+||+|||
T Consensus        81 ~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~---~i~H~dl~~~nil~~~~~~~~kl~dfg  156 (295)
T cd07837          81 LYLVFEYLDS-DLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHKH---GVMHRDLKPQNLLVDKQKGLLKIADLG  156 (295)
T ss_pred             EEEEeeccCc-CHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCChHHEEEecCCCeEEEeecc
Confidence            7999999996 5544333221    1224556788999999999999998   8999999999999998 8899999999


Q ss_pred             ceEEeCCCCcceeceeeecccccCchhHH-------HHHHHhcCCCcc-eeecccccCCCCCCH----------------
Q 045577          276 PARIFGDQTEEVTGRVIGTQTLKTVPELL-------QAWKLWSEGDPM-EIIDEQTKMKGPFSA----------------  331 (392)
Q Consensus       276 la~~~~~~~~~~~~~~~gt~~y~a~~~~~-------~~~diws~G~v~-~~ld~~~~~~~~~~~----------------  331 (392)
                      +++........ .....+++.|+| ||..       ...|+|+.|+++ +++.+.+.+.+..+.                
T Consensus       157 ~~~~~~~~~~~-~~~~~~~~~~~a-PE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (295)
T cd07837         157 LGRAFSIPVKS-YTHEIVTLWYRA-PEVLLGSTHYSTPVDIWSVGCIFAEMSRKQPLFPGDSELQQLLHIFKLLGTPTEQ  234 (295)
T ss_pred             cceecCCCccc-cCCcccccCCCC-hHHhhCCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHhCCCChh
Confidence            99865422111 112356778998 6644       267999999876 444443333221111                


Q ss_pred             ---------------------------HHHHHHHHHHHhhcccCcCCCCCHHHHHH
Q 045577          332 ---------------------------DELVKCIEVGLLCVQQRIEDWPTMSSVLT  360 (392)
Q Consensus       332 ---------------------------~~~~~~~~i~~~Cl~~dp~~RPsm~eVv~  360 (392)
                                                 .....+.+++..|++.+|.+||++.++++
T Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~R~~~~eil~  290 (295)
T cd07837         235 VWPGVSKLRDWHEFPQWKPQDLSRAVPDLSPEGLDLLQKMLRYDPAKRISAKAALT  290 (295)
T ss_pred             hCcchhhccchhhcCcccchhHHHhccccCHHHHHHHHHHccCChhhcCCHHHHhc
Confidence                                       11234566888999999999999998875

Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm

>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional

Probab=99.72  E-value=5.5e-18  Score=158.39  Aligned_cols=166  Identities=18%  Similarity=0.203  Sum_probs=121.7

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEc
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLD  264 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~  264 (392)
                      |+++++.......++..+++|||++++++........ ...+..+..++.|+++||.|||+.   +++||||||+||+++
T Consensus        68 h~~iv~~~~~~~~~~~~~iv~e~~~~~~L~~~l~~~~-~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~nil~~  143 (267)
T PHA03390         68 NPNFIKLYYSVTTLKGHVLIMDYIKDGDLFDLLKKEG-KLSEAEVKKIIRQLVEALNDLHKH---NIIHNDIKLENVLYD  143 (267)
T ss_pred             CCCEEEEEEEEecCCeeEEEEEcCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEEe
Confidence            4555555544444567999999999999987665543 334555788999999999999998   899999999999999


Q ss_pred             CCC-CCeEeeeeceEEeCCCCcceeceeeecccccCchhHHH------HHHHhcCCCcc-eeecccccCCCCCCH-----
Q 045577          265 AEI-NPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELLQ------AWKLWSEGDPM-EIIDEQTKMKGPFSA-----  331 (392)
Q Consensus       265 ~~~-~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~~------~~diws~G~v~-~~ld~~~~~~~~~~~-----  331 (392)
                      .++ .++|+|||+++.....     ....++..|+| ||...      ..|+|+.|+++ +++.+..++......     
T Consensus       144 ~~~~~~~l~dfg~~~~~~~~-----~~~~~~~~y~a-PE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~  217 (267)
T PHA03390        144 RAKDRIYLCDYGLCKIIGTP-----SCYDGTLDYFS-PEKIKGHNYDVSFDWWAVGVLTYELLTGKHPFKEDEDEELDLE  217 (267)
T ss_pred             CCCCeEEEecCccceecCCC-----ccCCCCCcccC-hhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCcchhhHH
Confidence            988 9999999998875422     12357888999 66543      57999999865 555553333211110     


Q ss_pred             --------------HHHHHHHHHHHhhcccCcCCCCC-HHHHHH
Q 045577          332 --------------DELVKCIEVGLLCVQQRIEDWPT-MSSVLT  360 (392)
Q Consensus       332 --------------~~~~~~~~i~~~Cl~~dp~~RPs-m~eVv~  360 (392)
                                    .....+.+++..|++.+|.+||+ ++++++
T Consensus       218 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~l~  261 (267)
T PHA03390        218 SLLKRQQKKLPFIKNVSKNANDFVQSMLKYNINYRLTNYNEIIK  261 (267)
T ss_pred             HHHHhhcccCCcccccCHHHHHHHHHHhccChhhCCchHHHHhc
Confidence                          12235567778999999999995 677764

>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

Probab=99.72  E-value=4.9e-18  Score=157.92  Aligned_cols=171  Identities=18%  Similarity=0.223  Sum_probs=122.6

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEc
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLD  264 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~  264 (392)
                      |+++++.......++..++++||++++++....++.. ...+..+..++.|++.||.|||+.   +++|+||||+||+++
T Consensus        61 ~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~nil~~  136 (265)
T cd06631          61 HVNIVQYLGTCLDDNTISIFMEFVPGGSISSILNRFG-PLPEPVFCKYTKQILDGVAYLHNN---CVVHRDIKGNNVMLM  136 (265)
T ss_pred             CCCEeeEeeEeecCCeEEEEEecCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhC---CcccCCcCHHhEEEC
Confidence            4555555555455667899999999999987665533 234555778999999999999998   899999999999999


Q ss_pred             CCCCCeEeeeeceEEeCCC-----CcceeceeeecccccCchhHH------HHHHHhcCCCcc-eeecccccCCCC----
Q 045577          265 AEINPNISDFGPARIFGDQ-----TEEVTGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIIDEQTKMKGP----  328 (392)
Q Consensus       265 ~~~~~kl~DFGla~~~~~~-----~~~~~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld~~~~~~~~----  328 (392)
                      .++.+||+|||++......     .........|+..|++ ||..      ...|+|+.|+++ +++.+..++...    
T Consensus       137 ~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~  215 (265)
T cd06631         137 PNGIIKLIDFGCARRLAWVGLHGTHSNMLKSMHGTPYWMA-PEVINESGYGRKSDIWSIGCTVFEMATGKPPLASMDRLA  215 (265)
T ss_pred             CCCeEEeccchhhHhhhhccccccccccccccCCCccccC-hhhhcCCCCcchhhHHHHHHHHHHHHhCCCccccCChHH
Confidence            9999999999998754210     1111223457888988 6654      468999999876 444443322111    


Q ss_pred             --------------CCHHHHHHHHHHHHhhcccCcCCCCCHHHHHH
Q 045577          329 --------------FSADELVKCIEVGLLCVQQRIEDWPTMSSVLT  360 (392)
Q Consensus       329 --------------~~~~~~~~~~~i~~~Cl~~dp~~RPsm~eVv~  360 (392)
                                    .+......+.+++.+|++.+|++||++.++++
T Consensus       216 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~  261 (265)
T cd06631         216 AMFYIGAHRGLMPRLPDSFSAAAIDFVTSCLTRDQHERPSALQLLR  261 (265)
T ss_pred             HHHHhhhccCCCCCCCCCCCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence                          11111234667788999999999999998875

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.

>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

Probab=99.72  E-value=7.7e-18  Score=155.44  Aligned_cols=171  Identities=20%  Similarity=0.252  Sum_probs=120.9

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhcc-ccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEE
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECS-KYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLL  263 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~-~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll  263 (392)
                      |++.++.....+.++..+++|||++++++.....+.... ..+..+..++.+++.||.|||+.   +++|+||||+||++
T Consensus        58 ~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~---~i~h~dl~~~nil~  134 (256)
T cd08220          58 HPNIIEYYENFLEDKALMIVMEYAPGGTLAEYIQKRCNSLLDEDTILHFFVQILLALHHVHTK---LILHRDLKTQNILL  134 (256)
T ss_pred             CCchhheeeeEecCCEEEEEEecCCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEE
Confidence            444444444445567789999999999887655443222 34555788999999999999998   89999999999999


Q ss_pred             cCC-CCCeEeeeeceEEeCCCCcceeceeeecccccCchhHH------HHHHHhcCCCcc-eeecccccCCCCC------
Q 045577          264 DAE-INPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIIDEQTKMKGPF------  329 (392)
Q Consensus       264 ~~~-~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld~~~~~~~~~------  329 (392)
                      +.+ ..+|++|||++.......  ......++..|++ ||..      .+.|+|+.|+++ +++.+...+....      
T Consensus       135 ~~~~~~~~l~d~~~~~~~~~~~--~~~~~~~~~~y~a-PE~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~  211 (256)
T cd08220         135 DKHKMVVKIGDFGISKILSSKS--KAYTVVGTPCYIS-PELCEGKPYNQKSDIWALGCVLYELASLKRAFEAANLPALVL  211 (256)
T ss_pred             cCCCCEEEEccCCCceecCCCc--cccccccCCcccC-chhccCCCCCcccchHHHHHHHHHHHhCCCCcccCchHHHHH
Confidence            855 457999999998765322  1223467889999 6654      368999999876 3433322222111      


Q ss_pred             ----------CHHHHHHHHHHHHhhcccCcCCCCCHHHHHHH
Q 045577          330 ----------SADELVKCIEVGLLCVQQRIEDWPTMSSVLTM  361 (392)
Q Consensus       330 ----------~~~~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~  361 (392)
                                .......+.+++..|++.+|++||++.++++.
T Consensus       212 ~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~ll~~  253 (256)
T cd08220         212 KIMSGTFAPISDRYSPDLRQLILSMLNLDPSKRPQLSQIMAQ  253 (256)
T ss_pred             HHHhcCCCCCCCCcCHHHHHHHHHHccCChhhCCCHHHHhhC
Confidence                      11122346678889999999999999999863

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with

>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.72  E-value=6.7e-18  Score=158.90  Aligned_cols=148  Identities=20%  Similarity=0.233  Sum_probs=113.9

Q ss_pred             CCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEcCCCCCeEeeeeceE
Q 045577          199 GEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEINPNISDFGPAR  278 (392)
Q Consensus       199 ~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~~~~~~kl~DFGla~  278 (392)
                      +.+|+||||+.+|||.+.+.+-.-.. +..+..++.+||-||-+||++   +||.||||..||+||.+|++||+|||+++
T Consensus       423 DRLyFVMEyvnGGDLMyhiQQ~GkFK-Ep~AvFYAaEiaigLFFLh~k---gIiYRDLKLDNvmLd~eGHiKi~DFGmcK  498 (683)
T KOG0696|consen  423 DRLYFVMEYVNGGDLMYHIQQVGKFK-EPVAVFYAAEIAIGLFFLHSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCK  498 (683)
T ss_pred             hheeeEEEEecCchhhhHHHHhcccC-CchhhhhhHHHHHHhhhhhcC---CeeeeeccccceEeccCCceEeeeccccc
Confidence            57999999999999988665543333 223577899999999999999   99999999999999999999999999997


Q ss_pred             EeCCCCcceeceeeecccccCchhHH------HHHHHhcCCCcc-eeecccccCCCCCCHHHHH---------------H
Q 045577          279 IFGDQTEEVTGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIIDEQTKMKGPFSADELV---------------K  336 (392)
Q Consensus       279 ~~~~~~~~~~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld~~~~~~~~~~~~~~~---------------~  336 (392)
                      .-- .....+.+.+||+.|+| ||+.      .+.|.|+.|.++ |++.+++++.++...+...               +
T Consensus       499 Eni-~~~~TTkTFCGTPdYiA-PEIi~YqPYgksvDWWa~GVLLyEmlaGQpPFdGeDE~elF~aI~ehnvsyPKslSkE  576 (683)
T KOG0696|consen  499 ENI-FDGVTTKTFCGTPDYIA-PEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQAIMEHNVSYPKSLSKE  576 (683)
T ss_pred             ccc-cCCcceeeecCCCcccc-cceEEecccccchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHccCcCcccccHH
Confidence            521 22344566899999999 6654      378999999977 7888888887765444333               2


Q ss_pred             HHHHHHhhcccCcCCC
Q 045577          337 CIEVGLLCVQQRIEDW  352 (392)
Q Consensus       337 ~~~i~~~Cl~~dp~~R  352 (392)
                      .+.|...-+...|.+|
T Consensus       577 Av~ickg~ltK~P~kR  592 (683)
T KOG0696|consen  577 AVAICKGLLTKHPGKR  592 (683)
T ss_pred             HHHHHHHHhhcCCccc
Confidence            3334445566677666

>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

Probab=99.72  E-value=5e-18  Score=157.09  Aligned_cols=175  Identities=20%  Similarity=0.249  Sum_probs=126.0

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEc
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLD  264 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~  264 (392)
                      |+++++.....+.+...|+++||++++++.....+.. ...+..+..++.|++.||.|||+.   +++|+||+|+||+++
T Consensus        52 h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~~L~~lH~~---~i~H~di~~~nil~~  127 (265)
T cd05579          52 SPYVVKLYYSFQGKKNLYLVMEYLPGGDLASLLENVG-SLDEDVARIYIAEIVLALEYLHSN---GIIHRDLKPDNILID  127 (265)
T ss_pred             CcchhHHHHheecCcEEEEEEecCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHc---CeecCCCCHHHeEEc
Confidence            5666665555555677899999999988876554433 335555788999999999999998   899999999999999


Q ss_pred             CCCCCeEeeeeceEEeCCCCc-------ceeceeeecccccCchhHH------HHHHHhcCCCcc-eeecccccCCCCCC
Q 045577          265 AEINPNISDFGPARIFGDQTE-------EVTGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIIDEQTKMKGPFS  330 (392)
Q Consensus       265 ~~~~~kl~DFGla~~~~~~~~-------~~~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld~~~~~~~~~~  330 (392)
                      .++.+||+|||++........       .......++..|++ ||..      ...|+|+.|+++ +++.+...+.....
T Consensus       128 ~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-Pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~  206 (265)
T cd05579         128 SNGHLKLTDFGLSKVGLVRRQINLNDDEKEDKRIVGTPDYIA-PEVILGQGHSKTVDWWSLGCILYEFLVGIPPFHGETP  206 (265)
T ss_pred             CCCCEEEEecccchhcccCcccccccccccccCcccCccccC-HHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCH
Confidence            999999999999875432111       12223467788888 6654      367999999876 44444333211111


Q ss_pred             ---------------HHH--HHHHHHHHHhhcccCcCCCCCHHHHHHHHcc
Q 045577          331 ---------------ADE--LVKCIEVGLLCVQQRIEDWPTMSSVLTMLSN  364 (392)
Q Consensus       331 ---------------~~~--~~~~~~i~~~Cl~~dp~~RPsm~eVv~~L~~  364 (392)
                                     ...  ...+.+++..|++.+|++||++.+|.+.|+.
T Consensus       207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~~~~~l~~  257 (265)
T cd05579         207 EEIFQNILNGKIEWPEDVEVSDEAIDLISKLLVPDPEKRLGAKSIEEIKNH  257 (265)
T ss_pred             HHHHHHHhcCCcCCCccccCCHHHHHHHHHHhcCCHhhcCCCccHHHHhcC
Confidence                           111  3456778889999999999999777777754

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re

>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6

Probab=99.72  E-value=4.7e-18  Score=160.41  Aligned_cols=157  Identities=17%  Similarity=0.148  Sum_probs=116.4

Q ss_pred             CCCeeEEecCccCCCcChhhhhhh-ccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEcCCCCCeEeeeec
Q 045577          198 DGEVFLMFEGIKLPDKSEFTCEFE-CSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEINPNISDFGP  276 (392)
Q Consensus       198 ~~~~~lv~e~~~~~~l~~~~~~~~-~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~~~~~~kl~DFGl  276 (392)
                      ++..+++|||+.++++........ .......+..++.|++.||.|||+.   +++||||||+||+++.++.++|+|||+
T Consensus        72 ~~~~~lv~e~~~g~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~---~iiH~dikp~Nil~~~~~~~~l~Dfg~  148 (285)
T cd05630          72 KDALCLVLTLMNGGDLKFHIYHMGEAGFEEGRAVFYAAEICCGLEDLHQE---RIVYRDLKPENILLDDHGHIRISDLGL  148 (285)
T ss_pred             CCEEEEEEEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCCCHHHEEECCCCCEEEeeccc
Confidence            456899999999999977554322 2234555788999999999999997   899999999999999999999999999


Q ss_pred             eEEeCCCCcceeceeeecccccCchhHHH------HHHHhcCCCcc-eeecccccCCCCCC---HH--------------
Q 045577          277 ARIFGDQTEEVTGRVIGTQTLKTVPELLQ------AWKLWSEGDPM-EIIDEQTKMKGPFS---AD--------------  332 (392)
Q Consensus       277 a~~~~~~~~~~~~~~~gt~~y~a~~~~~~------~~diws~G~v~-~~ld~~~~~~~~~~---~~--------------  332 (392)
                      +........  .....|+..|+| ||...      ..|+|+.|+++ +++.+..++.....   .+              
T Consensus       149 ~~~~~~~~~--~~~~~g~~~y~a-PE~~~~~~~~~~~DiwslG~~l~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~  225 (285)
T cd05630         149 AVHVPEGQT--IKGRVGTVGYMA-PEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVQEEYS  225 (285)
T ss_pred             eeecCCCcc--ccCCCCCccccC-hHHHcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCccchHHHHHhhhhhhhhhcC
Confidence            876542211  122468999999 77653      57999999876 55555444432211   01              


Q ss_pred             --HHHHHHHHHHhhcccCcCCCCC-----HHHHHH
Q 045577          333 --ELVKCIEVGLLCVQQRIEDWPT-----MSSVLT  360 (392)
Q Consensus       333 --~~~~~~~i~~~Cl~~dp~~RPs-----m~eVv~  360 (392)
                        ....+.+++..|++.||++||+     +.++++
T Consensus       226 ~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~~~~~  260 (285)
T cd05630         226 EKFSPDARSLCKMLLCKDPKERLGCQGGGAREVKE  260 (285)
T ss_pred             ccCCHHHHHHHHHHhhcCHHHccCCCCCchHHHHc
Confidence              1113566788999999999999     777776

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as

>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

Probab=99.72  E-value=5.8e-18  Score=157.02  Aligned_cols=171  Identities=19%  Similarity=0.230  Sum_probs=121.8

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEc
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLD  264 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~  264 (392)
                      |++.++........+..++++||++++++........ ......+..++.+++.||.|||+.   +++|+||+|.||+++
T Consensus        58 ~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~i~~~i~~~l~~lh~~---~i~H~dl~~~nil~~  133 (264)
T cd06626          58 HPNLVKYYGVEVHREKVYIFMEYCSGGTLEELLEHGR-ILDEHVIRVYTLQLLEGLAYLHSH---GIVHRDIKPANIFLD  133 (264)
T ss_pred             CCChhheeeeEecCCEEEEEEecCCCCcHHHHHhhcC-CCChHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEC
Confidence            4555555555444567899999999998877554432 234455788999999999999998   899999999999999


Q ss_pred             CCCCCeEeeeeceEEeCCCCcce---eceeeecccccCchhHH---------HHHHHhcCCCcc-eeecccccCCCCC--
Q 045577          265 AEINPNISDFGPARIFGDQTEEV---TGRVIGTQTLKTVPELL---------QAWKLWSEGDPM-EIIDEQTKMKGPF--  329 (392)
Q Consensus       265 ~~~~~kl~DFGla~~~~~~~~~~---~~~~~gt~~y~a~~~~~---------~~~diws~G~v~-~~ld~~~~~~~~~--  329 (392)
                      .++.+||+|||++..........   .....++..|++ ||..         ...|+|+.|+++ +++.+..++....  
T Consensus       134 ~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf~~~~~~  212 (264)
T cd06626         134 HNGVIKLGDFGCAVKLKNNTTTMGEEVQSLAGTPAYMA-PEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSELDNE  212 (264)
T ss_pred             CCCCEEEcccccccccCCCCCcccccccCCcCCcCccC-hhhccCCCCCCCCcccchHHHHHHHHHHHhCCCCccCCcch
Confidence            99999999999988765222111   112456788888 6643         356999999766 4544433332110  


Q ss_pred             ---------------CHHH--HHHHHHHHHhhcccCcCCCCCHHHHHH
Q 045577          330 ---------------SADE--LVKCIEVGLLCVQQRIEDWPTMSSVLT  360 (392)
Q Consensus       330 ---------------~~~~--~~~~~~i~~~Cl~~dp~~RPsm~eVv~  360 (392)
                                     +...  ...+.+++..|++.+|++||++.+++.
T Consensus       213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~  260 (264)
T cd06626         213 FQIMFHVGAGHKPPIPDSLQLSPEGKDFLDRCLESDPKKRPTASELLQ  260 (264)
T ss_pred             HHHHHHHhcCCCCCCCcccccCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence                           0111  234567888999999999999999864

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4

>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.72  E-value=1.8e-18  Score=168.94  Aligned_cols=152  Identities=22%  Similarity=0.269  Sum_probs=110.7

Q ss_pred             CCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEcCCCCCeEeeeeceE
Q 045577          199 GEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEINPNISDFGPAR  278 (392)
Q Consensus       199 ~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~~~~~~kl~DFGla~  278 (392)
                      ...++|||||-+.-.+..+...+.+ .+..+..|+.|.+.||.|||+.   +.||||||..|||+.+.|.+|++|||.|.
T Consensus        99 ~TaWLVMEYClGSAsDlleVhkKpl-qEvEIAAi~~gaL~gLaYLHS~---~~IHRDiKAGNILLse~g~VKLaDFGSAs  174 (948)
T KOG0577|consen   99 HTAWLVMEYCLGSASDLLEVHKKPL-QEVEIAAITHGALQGLAYLHSH---NRIHRDIKAGNILLSEPGLVKLADFGSAS  174 (948)
T ss_pred             chHHHHHHHHhccHHHHHHHHhccc-hHHHHHHHHHHHHHHHHHHHHh---hHHhhhccccceEecCCCeeeeccccchh
Confidence            4568999999764433333333322 3333677899999999999998   89999999999999999999999999987


Q ss_pred             EeCCCCcceeceeeecccccCchhHHH---------HHHHhcCCCc-ceeecccccCCCCC-----------------CH
Q 045577          279 IFGDQTEEVTGRVIGTQTLKTVPELLQ---------AWKLWSEGDP-MEIIDEQTKMKGPF-----------------SA  331 (392)
Q Consensus       279 ~~~~~~~~~~~~~~gt~~y~a~~~~~~---------~~diws~G~v-~~~ld~~~~~~~~~-----------------~~  331 (392)
                      ++.     ....++|||.||| |+++-         .+|+||+|+. +++...+|+++.-.                 ..
T Consensus       175 i~~-----PAnsFvGTPywMA-PEVILAMDEGqYdgkvDvWSLGITCIELAERkPPlFnMNAMSALYHIAQNesPtLqs~  248 (948)
T KOG0577|consen  175 IMA-----PANSFVGTPYWMA-PEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPTLQSN  248 (948)
T ss_pred             hcC-----chhcccCCccccc-hhHheeccccccCCccceeeccchhhhhhhcCCCccCchHHHHHHHHHhcCCCCCCCc
Confidence            753     2345799999999 76653         6799999974 35555444432211                 11


Q ss_pred             HHHHHHHHHHHhhcccCcCCCCCHHHHHH
Q 045577          332 DELVKCIEVGLLCVQQRIEDWPTMSSVLT  360 (392)
Q Consensus       332 ~~~~~~~~i~~~Cl~~dp~~RPsm~eVv~  360 (392)
                      +-...+..++-.|++.-|.+|||.++++.
T Consensus       249 eWS~~F~~Fvd~CLqKipqeRptse~ll~  277 (948)
T KOG0577|consen  249 EWSDYFRNFVDSCLQKIPQERPTSEELLK  277 (948)
T ss_pred             hhHHHHHHHHHHHHhhCcccCCcHHHHhh
Confidence            22334555666999999999999887664

>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]

Probab=99.72  E-value=5.4e-18  Score=167.68  Aligned_cols=167  Identities=17%  Similarity=0.123  Sum_probs=122.7

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEE-
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLL-  263 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll-  263 (392)
                      |++.+......-++.+.|+|||.++++.+...+.......  ..+..|+.+++.|+.|||++   +++|||+||+|||+ 
T Consensus       375 h~niv~~~~v~~~~~~~~~v~e~l~g~ell~ri~~~~~~~--~e~~~w~~~lv~Av~~LH~~---gvvhRDLkp~NIL~~  449 (612)
T KOG0603|consen  375 HPNIVKSHDVYEDGKEIYLVMELLDGGELLRRIRSKPEFC--SEASQWAAELVSAVDYLHEQ---GVVHRDLKPGNILLD  449 (612)
T ss_pred             CCcceeecceecCCceeeeeehhccccHHHHHHHhcchhH--HHHHHHHHHHHHHHHHHHhc---CeeecCCChhheeec
Confidence            6776666555444568999999999988766544433322  33667999999999999998   89999999999999 


Q ss_pred             cCCCCCeEeeeeceEEeCCCCcceeceeeecccccCchhHH------HHHHHhcCCCcc-eeecccccCCCCCCHHH---
Q 045577          264 DAEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIIDEQTKMKGPFSADE---  333 (392)
Q Consensus       264 ~~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld~~~~~~~~~~~~~---  333 (392)
                      +..+.++|+|||.++.....    ..+.+-|..|.| ||+.      .++|+|++|.++ +|+.++..+.......+   
T Consensus       450 ~~~g~lrltyFG~a~~~~~~----~~tp~~t~~y~A-PEvl~~~~yt~acD~WSLGvlLy~ML~G~tp~~~~P~~~ei~~  524 (612)
T KOG0603|consen  450 GSAGHLRLTYFGFWSELERS----CDTPALTLQYVA-PEVLAIQEYTEACDWWSLGVLLYEMLTGRTLFAAHPAGIEIHT  524 (612)
T ss_pred             CCCCcEEEEEechhhhCchh----hcccchhhcccC-hhhhccCCCCcchhhHHHHHHHHHHHhCCCccccCCchHHHHH
Confidence            58899999999999876533    223456778888 6665      588999999987 45555443322111112   


Q ss_pred             -----------HHHHHHHHHhhcccCcCCCCCHHHHHHH
Q 045577          334 -----------LVKCIEVGLLCVQQRIEDWPTMSSVLTM  361 (392)
Q Consensus       334 -----------~~~~~~i~~~Cl~~dp~~RPsm~eVv~~  361 (392)
                                 .....+++.+|++.||.+||+|.++...
T Consensus       525 ~i~~~~~s~~vS~~AKdLl~~LL~~dP~~Rl~~~~i~~h  563 (612)
T KOG0603|consen  525 RIQMPKFSECVSDEAKDLLQQLLQVDPALRLGADEIGAH  563 (612)
T ss_pred             hhcCCccccccCHHHHHHHHHhccCChhhCcChhhhccC
Confidence                       2234457779999999999999998754

>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

Probab=99.72  E-value=8.4e-18  Score=157.80  Aligned_cols=169  Identities=20%  Similarity=0.262  Sum_probs=119.4

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhh-ccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEE
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFE-CSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLL  263 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~-~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll  263 (392)
                      |++.++.......++..+++|||+ .+++........ ....+..+..++.|++.+|.|||+.   +++|+||+|.||++
T Consensus        57 h~~i~~~~~~~~~~~~~~lv~e~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~---~i~H~dl~~~ni~i  132 (283)
T cd07830          57 HPNIVKLKEVFRENDELYFVFEYM-EGNLYQLMKDRKGKPFSESVIRSIIYQILQGLAHIHKH---GFFHRDLKPENLLV  132 (283)
T ss_pred             CCCchhHHHHhhcCCcEEEEEecC-CCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChhhEEE
Confidence            334444444444467889999999 566655443332 2335566889999999999999998   89999999999999


Q ss_pred             cCCCCCeEeeeeceEEeCCCCcceeceeeecccccCchhHH-------HHHHHhcCCCcc-eeecccccCCCCCCH----
Q 045577          264 DAEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELL-------QAWKLWSEGDPM-EIIDEQTKMKGPFSA----  331 (392)
Q Consensus       264 ~~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~-------~~~diws~G~v~-~~ld~~~~~~~~~~~----  331 (392)
                      +.++.++|+|||++........  .....++..|++ ||..       ...|+|+.|+++ +++.+.+.+......    
T Consensus       133 ~~~~~~~l~d~~~~~~~~~~~~--~~~~~~~~~~~a-PE~~~~~~~~~~~~Di~s~G~~l~el~~g~~~~~~~~~~~~~~  209 (283)
T cd07830         133 SGPEVVKIADFGLAREIRSRPP--YTDYVSTRWYRA-PEILLRSTSYSSPVDIWALGCIMAELYTLRPLFPGSSEIDQLY  209 (283)
T ss_pred             cCCCCEEEeecccceeccCCCC--cCCCCCcccccC-ceeeecCcCcCCccchhhHHHHHHHHHhCCCccCCCChHHHHH
Confidence            9999999999999987542211  122456778888 5532       367999999876 444443322211110    


Q ss_pred             -----------------------------------------HHHHHHHHHHHhhcccCcCCCCCHHHHHH
Q 045577          332 -----------------------------------------DELVKCIEVGLLCVQQRIEDWPTMSSVLT  360 (392)
Q Consensus       332 -----------------------------------------~~~~~~~~i~~~Cl~~dp~~RPsm~eVv~  360 (392)
                                                               .....+.+++.+|++.+|++||++.|++.
T Consensus       210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~  279 (283)
T cd07830         210 KICSVLGTPTKQDWPEGYKLASKLGFRFPQFAPTSLHQLIPNASPEAIDLIKDMLRWDPKKRPTASQALQ  279 (283)
T ss_pred             HHHHhcCCCChhhhhhHhhhhccccccccccccccHHHHcccCCHHHHHHHHHhcccCcccCCCHHHHhh
Confidence                                                     01245778889999999999999999875

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili

>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases

Probab=99.71  E-value=7.4e-18  Score=154.39  Aligned_cols=159  Identities=21%  Similarity=0.296  Sum_probs=118.9

Q ss_pred             CCCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEcCCCCCeEeeee
Q 045577          196 CGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEINPNISDFG  275 (392)
Q Consensus       196 C~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~~~~~~kl~DFG  275 (392)
                      +.++..++++||++++++...............+..++.|++.||.|||+.   +++|+||+|+||+++.++.+||+|||
T Consensus        67 ~~~~~~~l~~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~---~i~h~dl~p~ni~i~~~~~~~l~d~~  143 (253)
T cd05122          67 LKKDELWIVMEFCSGGSLKDLLKSTNQTLTESQIAYVCKELLKGLEYLHSN---GIIHRDIKAANILLTSDGEVKLIDFG  143 (253)
T ss_pred             ecCCeEEEEEecCCCCcHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhcC---CEecCCCCHHHEEEccCCeEEEeecc
Confidence            334678999999999988775554422335555788999999999999997   89999999999999999999999999


Q ss_pred             ceEEeCCCCcceeceeeecccccCchhHH------HHHHHhcCCCcc-eeecccccCCCCCC----------------HH
Q 045577          276 PARIFGDQTEEVTGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIIDEQTKMKGPFS----------------AD  332 (392)
Q Consensus       276 la~~~~~~~~~~~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld~~~~~~~~~~----------------~~  332 (392)
                      .+........  .....++..|++ ||..      ...|+|+.|+++ +++.+...+.....                ..
T Consensus       144 ~~~~~~~~~~--~~~~~~~~~~~~-PE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~  220 (253)
T cd05122         144 LSAQLSDTKA--RNTMVGTPYWMA-PEVINGKPYDYKADIWSLGITAIELAEGKPPYSELPPMKALFKIATNGPPGLRNP  220 (253)
T ss_pred             cccccccccc--ccceecCCcccC-HHHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHhcCCCCcCcc
Confidence            9877653221  334568888998 7764      367999999876 45554332222100                01


Q ss_pred             H--HHHHHHHHHhhcccCcCCCCCHHHHHH
Q 045577          333 E--LVKCIEVGLLCVQQRIEDWPTMSSVLT  360 (392)
Q Consensus       333 ~--~~~~~~i~~~Cl~~dp~~RPsm~eVv~  360 (392)
                      .  ...+.+++..|++.+|++||++.++++
T Consensus       221 ~~~~~~~~~~i~~~l~~~p~~R~t~~~~l~  250 (253)
T cd05122         221 EKWSDEFKDFLKKCLQKNPEKRPTAEQLLK  250 (253)
T ss_pred             cccCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence            1  245677888999999999999999875

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core

>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

Probab=99.71  E-value=8e-18  Score=156.19  Aligned_cols=159  Identities=21%  Similarity=0.288  Sum_probs=116.9

Q ss_pred             CCCeeEEecCccCCCcChhhhhhhc--cccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEcCCCCCeEeeee
Q 045577          198 DGEVFLMFEGIKLPDKSEFTCEFEC--SKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEINPNISDFG  275 (392)
Q Consensus       198 ~~~~~lv~e~~~~~~l~~~~~~~~~--~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~~~~~~kl~DFG  275 (392)
                      ....+++||+++++++.........  ...+..+..++.|++.||.|||+.   +++|+||||+||++++++.+||+|||
T Consensus        71 ~~~~~iv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lh~~---~i~h~~l~p~ni~~~~~~~~~l~df~  147 (267)
T cd06610          71 GDELWLVMPYLSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLHSN---GQIHRDIKAGNILLGEDGSVKIADFG  147 (267)
T ss_pred             CCEEEEEEeccCCCcHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHhEEEcCCCCEEEcccc
Confidence            4678999999999998776554322  224445778999999999999998   89999999999999999999999999


Q ss_pred             ceEEeCCCCcc---eeceeeecccccCchhHHH-------HHHHhcCCCcc-eeecccccCCCCCCH-------------
Q 045577          276 PARIFGDQTEE---VTGRVIGTQTLKTVPELLQ-------AWKLWSEGDPM-EIIDEQTKMKGPFSA-------------  331 (392)
Q Consensus       276 la~~~~~~~~~---~~~~~~gt~~y~a~~~~~~-------~~diws~G~v~-~~ld~~~~~~~~~~~-------------  331 (392)
                      ++..+......   ......|+..|++ ||...       ..|+|+.|+++ +++.+..++......             
T Consensus       148 ~~~~~~~~~~~~~~~~~~~~~~~~y~~-Pe~~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~  226 (267)
T cd06610         148 VSASLADGGDRTRKVRKTFVGTPCWMA-PEVMEQVHGYDFKADIWSFGITAIELATGAAPYSKYPPMKVLMLTLQNDPPS  226 (267)
T ss_pred             hHHHhccCccccccccccccCChhhcC-hHHHccccCcCcccchHhHhHHHHHHHhCCCCccccChhhhHHHHhcCCCCC
Confidence            98765522211   2233568889999 66543       46999999766 555543332211110             


Q ss_pred             --------HHHHHHHHHHHhhcccCcCCCCCHHHHHH
Q 045577          332 --------DELVKCIEVGLLCVQQRIEDWPTMSSVLT  360 (392)
Q Consensus       332 --------~~~~~~~~i~~~Cl~~dp~~RPsm~eVv~  360 (392)
                              .....+.+++..|++.+|++||++.++++
T Consensus       227 ~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~ll~  263 (267)
T cd06610         227 LETGADYKKYSKSFRKMISLCLQKDPSKRPTAEELLK  263 (267)
T ss_pred             cCCccccccccHHHHHHHHHHcCCChhhCcCHHHHhh
Confidence                    11245677888999999999999999875

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1

>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

Probab=99.71  E-value=1.1e-17  Score=156.98  Aligned_cols=153  Identities=21%  Similarity=0.319  Sum_probs=110.3

Q ss_pred             eeEEecCccCCCcChhhhhhh-ccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEcCCCCCeEeeeeceEE
Q 045577          201 VFLMFEGIKLPDKSEFTCEFE-CSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEINPNISDFGPARI  279 (392)
Q Consensus       201 ~~lv~e~~~~~~l~~~~~~~~-~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~~~~~~kl~DFGla~~  279 (392)
                      .+++|||+.. ++.....+.. ....+..+..++.|++.||.|||+.   +++|+|++|+||+++.++.+||+|||++..
T Consensus        81 ~~l~~e~~~~-~l~~~l~~~~~~~l~~~~~~~~~~~i~~al~~LH~~---~i~h~~l~~~nili~~~~~~~l~dfg~~~~  156 (287)
T cd07838          81 LTLVFEHVDQ-DLATYLSKCPKPGLPPETIKDLMRQLLRGVDFLHSH---RIVHRDLKPQNILVTSDGQVKIADFGLARI  156 (287)
T ss_pred             eEEEehhccc-CHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCChhhEEEccCCCEEEeccCccee
Confidence            8999999985 4544333322 1234555788999999999999998   899999999999999999999999999987


Q ss_pred             eCCCCcceeceeeecccccCchhHHH------HHHHhcCCCcc-eeecccccCCCCCCH---------------------
Q 045577          280 FGDQTEEVTGRVIGTQTLKTVPELLQ------AWKLWSEGDPM-EIIDEQTKMKGPFSA---------------------  331 (392)
Q Consensus       280 ~~~~~~~~~~~~~gt~~y~a~~~~~~------~~diws~G~v~-~~ld~~~~~~~~~~~---------------------  331 (392)
                      ......  .....++..|++ ||...      ..|+|+.|+++ +++.+.+.+......                     
T Consensus       157 ~~~~~~--~~~~~~~~~~~~-PE~~~~~~~~~~~Di~s~G~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (287)
T cd07838         157 YSFEMA--LTSVVVTLWYRA-PEVLLQSSYATPVDMWSVGCIFAELFRRRPLFRGTSEADQLDKIFDVIGLPSEEEWPRN  233 (287)
T ss_pred             ccCCcc--cccccccccccC-hHHhccCCCCCcchhhhHHHHHHHHHhCCCcccCCChHHHHHHHHHHcCCCChHhcCCC
Confidence            643221  122356788988 66543      57999999876 444443332221111                     


Q ss_pred             ---------------------HHHHHHHHHHHhhcccCcCCCCCHHHHHH
Q 045577          332 ---------------------DELVKCIEVGLLCVQQRIEDWPTMSSVLT  360 (392)
Q Consensus       332 ---------------------~~~~~~~~i~~~Cl~~dp~~RPsm~eVv~  360 (392)
                                           +....+.+++.+|++.||++||++.++++
T Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~il~  283 (287)
T cd07838         234 VSLPRSSFPSYTPRSFKSFVPEICEEGLDLLKKMLTFNPHKRISAFEALQ  283 (287)
T ss_pred             cccchhhcccccccchhhhhhhhhHHHHHHHHHHhccCCccCCCHHHHhc
Confidence                                 11234556788999999999999999874

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both

>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

Probab=99.71  E-value=1.4e-17  Score=154.55  Aligned_cols=163  Identities=16%  Similarity=0.114  Sum_probs=119.4

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEc
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLD  264 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~  264 (392)
                      |+++++.......+...|+++||++++++....++... .....+..++.|++.||.|||+.   +++|+||||+||+++
T Consensus        52 h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~-l~~~~~~~~~~~i~~~l~~lH~~---~~~h~dl~~~nilv~  127 (262)
T cd05572          52 HPFIVKLYRTFKDKKYIYMLMEYCLGGELWTILRDRGL-FDEYTARFYIACVVLAFEYLHNR---GIIYRDLKPENLLLD  127 (262)
T ss_pred             CCCEeeeeeeEEcCCccEEEEecCCCCcHHHHHhhcCC-CCHHHHHHHHHHHHHHHHHHhhC---CcccCCCCHHHEEEc
Confidence            45555554444445678999999999999876655432 34555788899999999999997   899999999999999


Q ss_pred             CCCCCeEeeeeceEEeCCCCcceeceeeecccccCchhHH------HHHHHhcCCCcc-eeecccccCCCCC--CHH---
Q 045577          265 AEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIIDEQTKMKGPF--SAD---  332 (392)
Q Consensus       265 ~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld~~~~~~~~~--~~~---  332 (392)
                      .++.+||+|||+++......  ......++..|++ ||..      ...|+|+.|+++ +++.+..++....  ..+   
T Consensus       128 ~~~~~~l~df~~~~~~~~~~--~~~~~~~~~~~~~-PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~  204 (262)
T cd05572         128 SNGYVKLVDFGFAKKLKSGQ--KTWTFCGTPEYVA-PEIILNKGYDFSVDYWSLGILLYELLTGRPPFGEDDEDPMEIYN  204 (262)
T ss_pred             CCCCEEEeeCCcccccCccc--ccccccCCcCccC-hhHhcCCCCCChhhhhhhHHHHHHHHhCCCCcCCCCCCHHHHHH
Confidence            99999999999998765322  1223467888999 6654      357999999876 4554433332222  111   


Q ss_pred             --------------HHHHHHHHHHhhcccCcCCCCC
Q 045577          333 --------------ELVKCIEVGLLCVQQRIEDWPT  354 (392)
Q Consensus       333 --------------~~~~~~~i~~~Cl~~dp~~RPs  354 (392)
                                    ....+.+++..|++.+|++||+
T Consensus       205 ~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~  240 (262)
T cd05572         205 DILKGNGKLEFPNYIDKAAKDLIKQLLRRNPEERLG  240 (262)
T ss_pred             HHhccCCCCCCCcccCHHHHHHHHHHccCChhhCcC
Confidence                          1235667888999999999999

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi

>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

Probab=99.71  E-value=7.9e-18  Score=158.77  Aligned_cols=169  Identities=15%  Similarity=0.217  Sum_probs=121.9

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEc
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLD  264 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~  264 (392)
                      |++.++.......++..|+++||++++++......  .......+..++.|++.||.|||+.   +++||||+|+||+++
T Consensus        75 h~~vv~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~--~~~~~~~~~~~~~ql~~~l~~lH~~---~i~H~dl~p~Nil~~  149 (285)
T cd06648          75 HPNIVEMYSSYLVGDELWVVMEFLEGGALTDIVTH--TRMNEEQIATVCLAVLKALSFLHAQ---GVIHRDIKSDSILLT  149 (285)
T ss_pred             CCChheEEEEEEcCCeEEEEEeccCCCCHHHHHHh--CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCChhhEEEc
Confidence            45555554444445678999999999988765544  2234445788999999999999998   899999999999999


Q ss_pred             CCCCCeEeeeeceEEeCCCCcceeceeeecccccCchhHH------HHHHHhcCCCcc-eeecccccCCCCC--------
Q 045577          265 AEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIIDEQTKMKGPF--------  329 (392)
Q Consensus       265 ~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld~~~~~~~~~--------  329 (392)
                      .++.+||+|||++........ ......|+..|++ ||..      ...|+|+.|+++ +++.+...+....        
T Consensus       150 ~~~~~~l~d~g~~~~~~~~~~-~~~~~~~~~~y~a-PE~~~~~~~~~~~Dv~slGv~l~ell~g~~p~~~~~~~~~~~~~  227 (285)
T cd06648         150 SDGRVKLSDFGFCAQVSKEVP-RRKSLVGTPYWMA-PEVISRLPYGTEVDIWSLGIMVIEMVDGEPPYFNEPPLQAMKRI  227 (285)
T ss_pred             CCCcEEEcccccchhhccCCc-ccccccCCccccC-HHHhcCCCCCCcccHHHHHHHHHHHHhCCCCCcCCCHHHHHHHH
Confidence            999999999998875442211 1122468889999 6654      357999999876 4444432221110        


Q ss_pred             ----------CHHHHHHHHHHHHhhcccCcCCCCCHHHHHH
Q 045577          330 ----------SADELVKCIEVGLLCVQQRIEDWPTMSSVLT  360 (392)
Q Consensus       330 ----------~~~~~~~~~~i~~~Cl~~dp~~RPsm~eVv~  360 (392)
                                .......+.+++.+|++.+|++||++.++++
T Consensus       228 ~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~  268 (285)
T cd06648         228 RDNLPPKLKNLHKVSPRLRSFLDRMLVRDPAQRATAAELLN  268 (285)
T ss_pred             HhcCCCCCcccccCCHHHHHHHHHHcccChhhCcCHHHHcc
Confidence                      0012245778888999999999999999886

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun

>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

Probab=99.71  E-value=1.1e-17  Score=155.76  Aligned_cols=157  Identities=20%  Similarity=0.263  Sum_probs=110.6

Q ss_pred             CCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEcCCCCCeEeeeeceE
Q 045577          199 GEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEINPNISDFGPAR  278 (392)
Q Consensus       199 ~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~~~~~~kl~DFGla~  278 (392)
                      ...++++||++++++......... ........++.|++.||.|||+.   +++|+||||+||+++.++.+||+|||+++
T Consensus        79 ~~~~l~~e~~~~~~L~~~l~~~~~-l~~~~~~~~~~qi~~~l~~LH~~---~i~H~~l~p~nil~~~~~~~~l~dfg~~~  154 (266)
T cd06651          79 KTLTIFMEYMPGGSVKDQLKAYGA-LTESVTRKYTRQILEGMSYLHSN---MIVHRDIKGANILRDSAGNVKLGDFGASK  154 (266)
T ss_pred             CEEEEEEeCCCCCcHHHHHHHcCC-CCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEECCCCCEEEccCCCcc
Confidence            457899999998888765544322 33444678999999999999987   89999999999999999999999999987


Q ss_pred             EeCCC--CcceeceeeecccccCchhHH------HHHHHhcCCCcc-eeecccccCCCCCCHH----------------H
Q 045577          279 IFGDQ--TEEVTGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIIDEQTKMKGPFSAD----------------E  333 (392)
Q Consensus       279 ~~~~~--~~~~~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld~~~~~~~~~~~~----------------~  333 (392)
                      .....  .........++..|+| ||..      .+.|+|+.|+++ +++.+..++......+                .
T Consensus       155 ~~~~~~~~~~~~~~~~~~~~y~a-PE~~~~~~~~~~~Dv~slG~i~~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~  233 (266)
T cd06651         155 RLQTICMSGTGIRSVTGTPYWMS-PEVISGEGYGRKADVWSLGCTVVEMLTEKPPWAEYEAMAAIFKIATQPTNPQLPSH  233 (266)
T ss_pred             ccccccccCCccccCCccccccC-HHHhCCCCCCchhhhHHHHHHHHHHHHCCCCccccchHHHHHHHhcCCCCCCCchh
Confidence            65321  1111122457888999 6654      367999999876 4555433332111111                1


Q ss_pred             HHHHHHHHHhhcccCcCCCCCHHHHHH
Q 045577          334 LVKCIEVGLLCVQQRIEDWPTMSSVLT  360 (392)
Q Consensus       334 ~~~~~~i~~~Cl~~dp~~RPsm~eVv~  360 (392)
                      ....++..+.|+..+|++||++.+|++
T Consensus       234 ~~~~~~~li~~~~~~p~~Rp~~~eil~  260 (266)
T cd06651         234 ISEHARDFLGCIFVEARHRPSAEELLR  260 (266)
T ss_pred             cCHHHHHHHHHhcCChhhCcCHHHHhc
Confidence            112233344799999999999999875

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development

>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]

Probab=99.71  E-value=5.4e-18  Score=153.80  Aligned_cols=159  Identities=20%  Similarity=0.286  Sum_probs=121.4

Q ss_pred             CCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEcCCCCCeEeeeece
Q 045577          198 DGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEINPNISDFGPA  277 (392)
Q Consensus       198 ~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~~~~~~kl~DFGla  277 (392)
                      +.++++|||||..|...+....+.-...+..+..++...++||+|||..   +-||||||..|||++.+|.+|++|||+|
T Consensus       100 ~sDLWIVMEYCGAGSiSDI~R~R~K~L~E~EIs~iL~~TLKGL~YLH~~---~KIHRDIKAGNILLNT~G~AKLADFGVA  176 (502)
T KOG0574|consen  100 HSDLWIVMEYCGAGSISDIMRARRKPLSEQEISAVLRDTLKGLQYLHDL---KKIHRDIKAGNILLNTDGIAKLADFGVA  176 (502)
T ss_pred             CCceEeehhhcCCCcHHHHHHHhcCCccHHHHHHHHHHHHhHHHHHHHH---HHHHhhcccccEEEcccchhhhhhcccc
Confidence            5789999999999998875554444445555778889999999999998   7899999999999999999999999999


Q ss_pred             EEeCCCCcceeceeeecccccCchhHHH------HHHHhcCCCcc-eeecccccCC----------------CCC--CHH
Q 045577          278 RIFGDQTEEVTGRVIGTQTLKTVPELLQ------AWKLWSEGDPM-EIIDEQTKMK----------------GPF--SAD  332 (392)
Q Consensus       278 ~~~~~~~~~~~~~~~gt~~y~a~~~~~~------~~diws~G~v~-~~ld~~~~~~----------------~~~--~~~  332 (392)
                      ..+.+. -....++.||+-||| ||+.+      ..|+|++|... ++..++++..                +.+  +++
T Consensus       177 GQLTDT-MAKRNTVIGTPFWMA-PEVI~EIGY~~~ADIWSLGITaIEMAEG~PPYsDIHPMRAIFMIPT~PPPTF~KPE~  254 (502)
T KOG0574|consen  177 GQLTDT-MAKRNTVIGTPFWMA-PEVIEEIGYDTKADIWSLGITAIEMAEGRPPYSDIHPMRAIFMIPTKPPPTFKKPEE  254 (502)
T ss_pred             chhhhh-HHhhCccccCccccc-HHHHHHhccchhhhHhhhcchhhhhhcCCCCcccccccceeEeccCCCCCCCCChHh
Confidence            876532 223345899999999 77664      67999999754 5555443321                111  223


Q ss_pred             HHHHHHHHHHhhcccCcCCCCCHHHHHHH
Q 045577          333 ELVKCIEVGLLCVQQRIEDWPTMSSVLTM  361 (392)
Q Consensus       333 ~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~  361 (392)
                      -...+-+.+..|+-..|++|-|+.++++.
T Consensus       255 WS~~F~DFi~~CLiK~PE~R~TA~~L~~H  283 (502)
T KOG0574|consen  255 WSSEFNDFIRSCLIKKPEERKTALRLCEH  283 (502)
T ss_pred             hhhHHHHHHHHHhcCCHHHHHHHHHHhhh
Confidence            34466778889999999999998776653

>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

Probab=99.71  E-value=1.2e-17  Score=154.80  Aligned_cols=170  Identities=22%  Similarity=0.294  Sum_probs=123.9

Q ss_pred             CCccccccCcCCCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCc-CCCCceeecccccceeEEc
Q 045577          186 GGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPE-DSRLEIIHRDHKTSNVLLD  264 (392)
Q Consensus       186 ~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~-~~~~~iiHrDlKp~NIll~  264 (392)
                      ++.++.......++..+++|||++++++....... .......+.+++.|+++||.|||+ .   +++|+||+|+||+++
T Consensus        59 ~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~l~~~~~~~~~~~l~~~l~~lh~~~---~~~H~~l~~~ni~~~  134 (264)
T cd06623          59 PYVVKCYGAFYKEGEISIVLEYMDGGSLADLLKKV-GKIPEPVLAYIARQILKGLDYLHTKR---HIIHRDIKPSNLLIN  134 (264)
T ss_pred             CCeeeEEEEEccCCeEEEEEEecCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHhccC---CCccCCCCHHHEEEC
Confidence            33343333333456789999999999987765543 233455578899999999999999 7   899999999999999


Q ss_pred             CCCCCeEeeeeceEEeCCCCcceeceeeecccccCchhHH------HHHHHhcCCCcc-eeecccccCCCCC--------
Q 045577          265 AEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIIDEQTKMKGPF--------  329 (392)
Q Consensus       265 ~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld~~~~~~~~~--------  329 (392)
                      .++.++|+|||++......... .....++..|++ ||..      ...|+|++|+++ +++.+..++....        
T Consensus       135 ~~~~~~l~df~~~~~~~~~~~~-~~~~~~~~~y~~-pE~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~  212 (264)
T cd06623         135 SKGEVKIADFGISKVLENTLDQ-CNTFVGTVTYMS-PERIQGESYSYAADIWSLGLTLLECALGKFPFLPPGQPSFFELM  212 (264)
T ss_pred             CCCCEEEccCccceecccCCCc-ccceeecccccC-HhhhCCCCCCchhhHHHHHHHHHHHHhCCCCCccccccCHHHHH
Confidence            9999999999999876532222 123567888988 6654      367999999876 4555433332221        


Q ss_pred             -----------CHH-HHHHHHHHHHhhcccCcCCCCCHHHHHHH
Q 045577          330 -----------SAD-ELVKCIEVGLLCVQQRIEDWPTMSSVLTM  361 (392)
Q Consensus       330 -----------~~~-~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~  361 (392)
                                 +.. ....+.+++..|++.+|++||++.++++.
T Consensus       213 ~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~R~~~~~ll~~  256 (264)
T cd06623         213 QAICDGPPPSLPAEEFSPEFRDFISACLQKDPKKRPSAAELLQH  256 (264)
T ss_pred             HHHhcCCCCCCCcccCCHHHHHHHHHHccCChhhCCCHHHHHhC
Confidence                       111 23457778889999999999999999874

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of

>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]

Probab=99.71  E-value=5.7e-18  Score=153.65  Aligned_cols=156  Identities=18%  Similarity=0.162  Sum_probs=113.1

Q ss_pred             CeeEEecCccCCCcChhhhhhhccc-cchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEcC---CCCCeEeeee
Q 045577          200 EVFLMFEGIKLPDKSEFTCEFECSK-YSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDA---EINPNISDFG  275 (392)
Q Consensus       200 ~~~lv~e~~~~~~l~~~~~~~~~~~-~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~~---~~~~kl~DFG  275 (392)
                      .+.+|||.|++|+|+..+.++.-.. .+..+-.|+.||+.|+.|||+.   .|.||||||+|+|...   +..+|++|||
T Consensus       133 cLLiVmE~meGGeLfsriq~~g~~afTErea~eI~~qI~~Av~~lH~~---nIAHRDlKpENLLyt~t~~na~lKLtDfG  209 (400)
T KOG0604|consen  133 CLLIVMECMEGGELFSRIQDRGDQAFTEREASEIMKQIGLAVRYLHSM---NIAHRDLKPENLLYTTTSPNAPLKLTDFG  209 (400)
T ss_pred             eeEeeeecccchHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhc---chhhccCChhheeeecCCCCcceEecccc
Confidence            4789999999999988665544333 4555788999999999999998   8999999999999954   4568999999


Q ss_pred             ceEEeCCCCcceeceeeecccccCchhHH------HHHHHhcCCCcceeeccc-ccC-------------------CCCC
Q 045577          276 PARIFGDQTEEVTGRVIGTQTLKTVPELL------QAWKLWSEGDPMEIIDEQ-TKM-------------------KGPF  329 (392)
Q Consensus       276 la~~~~~~~~~~~~~~~gt~~y~a~~~~~------~~~diws~G~v~~~ld~~-~~~-------------------~~~~  329 (392)
                      +|+.-..  .....+.+.|+.|.| |+++      ..+|+|+.|.+++++-.+ ++|                   ...+
T Consensus       210 FAK~t~~--~~~L~TPc~TPyYva-Pevlg~eKydkscdmwSlgVimYIlLCGyPPFYS~hg~aispgMk~rI~~gqy~F  286 (400)
T KOG0604|consen  210 FAKETQE--PGDLMTPCFTPYYVA-PEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKRRIRTGQYEF  286 (400)
T ss_pred             cccccCC--CccccCCcccccccC-HHHhCchhcCCCCCccchhHHHHHhhcCCCcccccCCccCChhHHhHhhccCccC
Confidence            9986432  233344678999999 6665      367999999987654321 111                   0112


Q ss_pred             CHH---H-HHHHHHHHHhhcccCcCCCCCHHHHHHH
Q 045577          330 SAD---E-LVKCIEVGLLCVQQRIEDWPTMSSVLTM  361 (392)
Q Consensus       330 ~~~---~-~~~~~~i~~~Cl~~dp~~RPsm~eVv~~  361 (392)
                      +.+   + .+...+++...+..+|.+|-|+.+++..
T Consensus       287 P~pEWs~VSe~aKdlIR~LLkt~PteRlTI~~~m~h  322 (400)
T KOG0604|consen  287 PEPEWSCVSEAAKDLIRKLLKTEPTERLTIEEVMDH  322 (400)
T ss_pred             CChhHhHHHHHHHHHHHHHhcCCchhheeHHHhhcC
Confidence            222   2 2233446667778999999999999865

>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

Probab=99.71  E-value=1.2e-17  Score=155.41  Aligned_cols=171  Identities=26%  Similarity=0.388  Sum_probs=123.1

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEc
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLD  264 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~  264 (392)
                      |++-++.....+..+..+++|||++++++.....+.. ...+..+..++.|++.||.|||+.   +++|+||||+||+++
T Consensus        62 h~~iv~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~ql~~al~~LH~~---~i~H~~i~~~nil~~  137 (268)
T cd06630          62 HPHIIRMLGATCEDSHFNLFVEWMAGGSVSHLLSKYG-AFKEAVIINYTEQLLRGLSYLHEN---QIIHRDVKGANLLID  137 (268)
T ss_pred             CCceehhhceeccCCeEEEEEeccCCCcHHHHHHHhC-CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEc
Confidence            5555666666666678999999999998876544332 234455788999999999999998   899999999999998


Q ss_pred             CCC-CCeEeeeeceEEeCCCC---cceeceeeecccccCchhHH------HHHHHhcCCCcc-eeecccccCCCC-----
Q 045577          265 AEI-NPNISDFGPARIFGDQT---EEVTGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIIDEQTKMKGP-----  328 (392)
Q Consensus       265 ~~~-~~kl~DFGla~~~~~~~---~~~~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld~~~~~~~~-----  328 (392)
                      .++ .+||+|||++.......   ........++..|++ ||..      .+.|+|+.|+++ +++.+..++...     
T Consensus       138 ~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~-PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~  216 (268)
T cd06630         138 STGQRLRIADFGAAARLAAKGTGAGEFQGQLLGTIAFMA-PEVLRGEQYGRSCDVWSVGCVIIEMATAKPPWNAEKHSNH  216 (268)
T ss_pred             CCCCEEEEcccccccccccccccCCccccccccccceeC-HhHhccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCcch
Confidence            776 58999999987764221   111223467888999 6654      357999999876 444443322211     


Q ss_pred             ---------------CCHHHHHHHHHHHHhhcccCcCCCCCHHHHHH
Q 045577          329 ---------------FSADELVKCIEVGLLCVQQRIEDWPTMSSVLT  360 (392)
Q Consensus       329 ---------------~~~~~~~~~~~i~~~Cl~~dp~~RPsm~eVv~  360 (392)
                                     .+......+.+++..|++.+|++||++.++++
T Consensus       217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~ll~  263 (268)
T cd06630         217 LALIFKIASATTAPSIPEHLSPGLRDVTLRCLELQPEDRPPSRELLK  263 (268)
T ss_pred             HHHHHHHhccCCCCCCchhhCHHHHHHHHHHcCCCcccCcCHHHHhc
Confidence                           11122245667888999999999999999874

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their

>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6

Probab=99.71  E-value=9.6e-18  Score=157.41  Aligned_cols=170  Identities=20%  Similarity=0.274  Sum_probs=118.4

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhh---hhccccchhhhhHHHHHHHhhhhcCcCCCCceeeccccccee
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCE---FECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNV  261 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~---~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NI  261 (392)
                      |+++++.......++..|++|||+++ ++......   ......+..+..++.|++.||.|||+++  +++||||||+||
T Consensus        59 ~~~iv~~~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~--~i~h~dlkp~ni  135 (283)
T cd06617          59 CPYTVTFYGALFREGDVWICMEVMDT-SLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHSKL--SVIHRDVKPSNV  135 (283)
T ss_pred             CCCeeeeeEEEecCCcEEEEhhhhcc-cHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhhcC--CeecCCCCHHHE
Confidence            55566555544456789999999984 44332211   1122355567899999999999999753  699999999999


Q ss_pred             EEcCCCCCeEeeeeceEEeCCCCcceeceeeecccccCchhHH----------HHHHHhcCCCcc-eeecccccCCCC--
Q 045577          262 LLDAEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELL----------QAWKLWSEGDPM-EIIDEQTKMKGP--  328 (392)
Q Consensus       262 ll~~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~----------~~~diws~G~v~-~~ld~~~~~~~~--  328 (392)
                      +++.++.+||+|||++.......  ......++..|++ ||..          ...|+|+.|+++ +++.+..++...  
T Consensus       136 l~~~~~~~kl~dfg~~~~~~~~~--~~~~~~~~~~y~a-PE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~  212 (283)
T cd06617         136 LINRNGQVKLCDFGISGYLVDSV--AKTIDAGCKPYMA-PERINPELNQKGYDVKSDVWSLGITMIELATGRFPYDSWKT  212 (283)
T ss_pred             EECCCCCEEEeeccccccccccc--ccccccCCccccC-hhhcCCcccccccCccccchhhHHHHHHHHhCCCCCCcccc
Confidence            99999999999999987653211  1122457888998 6643          346999999876 444443322110  


Q ss_pred             ---------------CCH-HHHHHHHHHHHhhcccCcCCCCCHHHHHH
Q 045577          329 ---------------FSA-DELVKCIEVGLLCVQQRIEDWPTMSSVLT  360 (392)
Q Consensus       329 ---------------~~~-~~~~~~~~i~~~Cl~~dp~~RPsm~eVv~  360 (392)
                                     .+. .....+.+++..|++.+|++||++.++++
T Consensus       213 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~  260 (283)
T cd06617         213 PFQQLKQVVEEPSPQLPAEKFSPEFQDFVNKCLKKNYKERPNYPELLQ  260 (283)
T ss_pred             CHHHHHHHHhcCCCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence                           000 11235667888999999999999999986

Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs

>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

Probab=99.71  E-value=1.2e-17  Score=161.36  Aligned_cols=155  Identities=22%  Similarity=0.357  Sum_probs=113.0

Q ss_pred             CeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEcCCCCCeEeeeeceEE
Q 045577          200 EVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEINPNISDFGPARI  279 (392)
Q Consensus       200 ~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~~~~~~kl~DFGla~~  279 (392)
                      ..|++|||+++ ++.....+.  ...+..+..++.|++.||.|||+.   +++||||||+||+++.++.+||+|||+++.
T Consensus        83 ~~~lv~e~~~~-~L~~~~~~~--~~~~~~~~~i~~qi~~~L~~LH~~---~i~H~dl~p~nill~~~~~~kl~d~g~~~~  156 (337)
T cd07852          83 DIYLVFEYMET-DLHAVIRAN--ILEDVHKRYIMYQLLKALKYIHSG---NVIHRDLKPSNILLNSDCRVKLADFGLARS  156 (337)
T ss_pred             eEEEEeccccc-CHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCcEEEeeccchhc
Confidence            57999999984 555443332  233444677899999999999998   899999999999999999999999999986


Q ss_pred             eCCCCc----ceeceeeecccccCchhHH-------HHHHHhcCCCcc-eeecccccCCCCCCHHH--------------
Q 045577          280 FGDQTE----EVTGRVIGTQTLKTVPELL-------QAWKLWSEGDPM-EIIDEQTKMKGPFSADE--------------  333 (392)
Q Consensus       280 ~~~~~~----~~~~~~~gt~~y~a~~~~~-------~~~diws~G~v~-~~ld~~~~~~~~~~~~~--------------  333 (392)
                      ......    .......|+..|++ ||..       ...|+|+.|+++ +++.++..+.+....+.              
T Consensus       157 ~~~~~~~~~~~~~~~~~~~~~y~a-PE~~~~~~~~~~~sDi~slG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~  235 (337)
T cd07852         157 LSELEENPENPVLTDYVATRWYRA-PEILLGSTRYTKGVDMWSVGCILGEMLLGKPLFPGTSTLNQLEKIIEVIGPPSAE  235 (337)
T ss_pred             cccccccccCcchhcccccccccC-ceeeeccccccccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHH
Confidence            642211    12233568889999 5532       357999999876 55555443332211111              


Q ss_pred             --------------------------------HHHHHHHHHhhcccCcCCCCCHHHHHHH
Q 045577          334 --------------------------------LVKCIEVGLLCVQQRIEDWPTMSSVLTM  361 (392)
Q Consensus       334 --------------------------------~~~~~~i~~~Cl~~dp~~RPsm~eVv~~  361 (392)
                                                      ...+.+++..|++.+|++||++.++++.
T Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rps~~~il~~  295 (337)
T cd07852         236 DIESIKSPFAATMLDSLPSRPRKPLDELLPKASDDALDLLKKLLVFNPNKRLTAEEALEH  295 (337)
T ss_pred             HHHHHHhhhHHHhhhhcccccccchhhhccCCCHHHHHHHHHhccCCcccccCHHHHhhC
Confidence                                            1245678889999999999999999975

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul

>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

Probab=99.71  E-value=2.1e-17  Score=152.45  Aligned_cols=170  Identities=19%  Similarity=0.188  Sum_probs=125.2

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhc---cccchhhhhHHHHHHHhhhhcCcCCCCceeeccccccee
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFEC---SKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNV  261 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~---~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NI  261 (392)
                      |++.++.....+.+...|++|||++++++....++...   ......+..++.|++.||.|||+.   +++|+||+|.||
T Consensus        58 ~~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh~~---~i~h~~l~~~ni  134 (256)
T cd08530          58 HPNIISYKEAFLDGNKLCIVMEYAPFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHEQ---KILHRDLKSANI  134 (256)
T ss_pred             CCCchhhhhhhccCCEEEEEehhcCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhC---CcccCCCCcceE
Confidence            55566655555666789999999999998876554322   124445788999999999999998   899999999999


Q ss_pred             EEcCCCCCeEeeeeceEEeCCCCcceeceeeecccccCchhHH------HHHHHhcCCCcc-eeecccccCCCC------
Q 045577          262 LLDAEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIIDEQTKMKGP------  328 (392)
Q Consensus       262 ll~~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld~~~~~~~~------  328 (392)
                      +++.++.+|++|||++......   ......++..|++ ||..      ...|+|+.|.++ +++.+..++...      
T Consensus       135 ~~~~~~~~kl~d~g~~~~~~~~---~~~~~~~~~~~~~-Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~~~  210 (256)
T cd08530         135 LLVANDLVKIGDLGISKVLKKN---MAKTQIGTPHYMA-PEVWKGRPYSYKSDIWSLGCLLYEMATFAPPFEARSMQDLR  210 (256)
T ss_pred             EEecCCcEEEeeccchhhhccC---CcccccCCccccC-HHHHCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHH
Confidence            9999999999999999776532   1222457788888 6654      368999999766 454443332211      


Q ss_pred             ----------CCHHHHHHHHHHHHhhcccCcCCCCCHHHHHHH
Q 045577          329 ----------FSADELVKCIEVGLLCVQQRIEDWPTMSSVLTM  361 (392)
Q Consensus       329 ----------~~~~~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~  361 (392)
                                ........+.+++..|++.+|++||++.++++.
T Consensus       211 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~  253 (256)
T cd08530         211 YKVQRGKYPPIPPIYSQDLQNFIRSMLQVKPKLRPNCDKILAS  253 (256)
T ss_pred             HHHhcCCCCCCchhhCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence                      111223457788889999999999999998763

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an

>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases

Probab=99.71  E-value=1.8e-17  Score=158.50  Aligned_cols=172  Identities=14%  Similarity=0.077  Sum_probs=120.3

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhc-cccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEE
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFEC-SKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLL  263 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~-~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll  263 (392)
                      ++++++.......+...|++|||+.++++.....+... ...+..+..++.|++.||.|||+.   +++|+||||+||++
T Consensus        60 ~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nili  136 (316)
T cd05574          60 HPFLPTLYASFQTETYLCLVMDYCPGGELFRLLQRQPGKCLSEEVARFYAAEVLLALEYLHLL---GIVYRDLKPENILL  136 (316)
T ss_pred             CCCchhheeeeecCCEEEEEEEecCCCCHHHHHHhCCCCccCHHHHHHHHHHHHHHHHHHHHC---CeeccCCChHHeEE
Confidence            44455444444445678999999999998775543321 224455778899999999999998   89999999999999


Q ss_pred             cCCCCCeEeeeeceEEeCCCCc----------------------------ceeceeeecccccCchhHH------HHHHH
Q 045577          264 DAEINPNISDFGPARIFGDQTE----------------------------EVTGRVIGTQTLKTVPELL------QAWKL  309 (392)
Q Consensus       264 ~~~~~~kl~DFGla~~~~~~~~----------------------------~~~~~~~gt~~y~a~~~~~------~~~di  309 (392)
                      +.++.++|+|||++........                            .......|+..|++ ||..      .+.|+
T Consensus       137 ~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~a-PE~~~~~~~~~~~Di  215 (316)
T cd05574         137 HESGHIMLSDFDLSKQSDVEPPPVSKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIA-PEVISGDGHGSAVDW  215 (316)
T ss_pred             cCCCCEEEeecchhhcccccccccccccccccccccccccchhhhcccccCCCCCCcCccCCcC-HHHHcCCCCCchHHH
Confidence            9999999999999875431110                            01112467888999 7654      36799


Q ss_pred             hcCCCcc-eeecccccCCCCCCH-----------------HHHHHHHHHHHhhcccCcCCCCC----HHHHHH
Q 045577          310 WSEGDPM-EIIDEQTKMKGPFSA-----------------DELVKCIEVGLLCVQQRIEDWPT----MSSVLT  360 (392)
Q Consensus       310 ws~G~v~-~~ld~~~~~~~~~~~-----------------~~~~~~~~i~~~Cl~~dp~~RPs----m~eVv~  360 (392)
                      |+.|+++ +++.+...+.+....                 .....+.+++.+|++.+|++||+    +.++++
T Consensus       216 ~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~ll~  288 (316)
T cd05574         216 WTLGILLYEMLYGTTPFKGSNRDETFSNILKKEVTFPGSPPVSSSARDLIRKLLVKDPSKRLGSKRGAAEIKQ  288 (316)
T ss_pred             HHHHHHHHHHhhCCCCCCCCchHHHHHHHhcCCccCCCccccCHHHHHHHHHHccCCHhHCCCchhhHHHHHc
Confidence            9999866 444443332211111                 12345677888999999999999    555555

Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin

>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5

Probab=99.70  E-value=1.8e-17  Score=153.05  Aligned_cols=172  Identities=19%  Similarity=0.218  Sum_probs=121.7

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhc-cccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEE
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFEC-SKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLL  263 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~-~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll  263 (392)
                      |++.++.......++..|+++||++++++.....+... ...+..+..++.|++.||.|||+.   +++|+||||+||++
T Consensus        58 h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~---~i~H~dl~~~nil~  134 (257)
T cd08225          58 HPNIVTFFASFQENGRLFIVMEYCDGGDLMKRINRQRGVLFSEDQILSWFVQISLGLKHIHDR---KILHRDIKSQNIFL  134 (257)
T ss_pred             CCChhhhhheeccCCeEEEEEecCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHHEEE
Confidence            44555444433445678999999999998776554332 234555788999999999999998   89999999999999


Q ss_pred             cCCCC-CeEeeeeceEEeCCCCcceeceeeecccccCchhHH------HHHHHhcCCCcc-eeecccccCCCCCCH----
Q 045577          264 DAEIN-PNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIIDEQTKMKGPFSA----  331 (392)
Q Consensus       264 ~~~~~-~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld~~~~~~~~~~~----  331 (392)
                      +.++. +|++|||.+........ ......|++.|+| ||..      ...|+|+.|+++ +++.+..++......    
T Consensus       135 ~~~~~~~~l~d~~~~~~~~~~~~-~~~~~~~~~~~~a-pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~  212 (257)
T cd08225         135 SKNGMVAKLGDFGIARQLNDSME-LAYTCVGTPYYLS-PEICQNRPYNNKTDIWSLGCVLYELCTLKHPFEGNNLHQLVL  212 (257)
T ss_pred             cCCCCeEEecccccchhccCCcc-cccccCCCccccC-HHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCccHHHHHH
Confidence            88754 69999999876543221 1222457888999 7654      368999999876 444443332211111    


Q ss_pred             ------------HHHHHHHHHHHhhcccCcCCCCCHHHHHHH
Q 045577          332 ------------DELVKCIEVGLLCVQQRIEDWPTMSSVLTM  361 (392)
Q Consensus       332 ------------~~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~  361 (392)
                                  .....+.+++.+|++.+|++||++.++++.
T Consensus       213 ~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~  254 (257)
T cd08225         213 KICQGYFAPISPNFSRDLRSLISQLFKVSPRDRPSITSILKR  254 (257)
T ss_pred             HHhcccCCCCCCCCCHHHHHHHHHHhccChhhCcCHHHHhhC
Confidence                        112246677789999999999999999753

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.

>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase

Probab=99.70  E-value=1.2e-17  Score=157.05  Aligned_cols=157  Identities=16%  Similarity=0.117  Sum_probs=116.9

Q ss_pred             CCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEcCCCCCeEeeeec
Q 045577          197 GDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEINPNISDFGP  276 (392)
Q Consensus       197 ~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~~~~~~kl~DFGl  276 (392)
                      ..+..|++|||+.++++........ ...+..+..++.|+++||.|||+.   +++||||||+||+++.++.+||+|||+
T Consensus        68 ~~~~~~~v~e~~~g~~L~~~l~~~~-~l~~~~~~~~~~ql~~~l~~lH~~---~i~H~di~p~nili~~~~~~kl~dfg~  143 (278)
T cd05606          68 TPDKLSFILDLMNGGDLHYHLSQHG-VFSEAEMRFYAAEIILGLEHMHNR---FVVYRDLKPANILLDEHGHVRISDLGL  143 (278)
T ss_pred             cCCEEEEEEecCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHC---CEEcCCCCHHHEEECCCCCEEEccCcC
Confidence            3467899999999999876554432 334555889999999999999998   899999999999999999999999999


Q ss_pred             eEEeCCCCcceeceeeecccccCchhHHH-------HHHHhcCCCcc-eeecccccCCCCC--CHH--------------
Q 045577          277 ARIFGDQTEEVTGRVIGTQTLKTVPELLQ-------AWKLWSEGDPM-EIIDEQTKMKGPF--SAD--------------  332 (392)
Q Consensus       277 a~~~~~~~~~~~~~~~gt~~y~a~~~~~~-------~~diws~G~v~-~~ld~~~~~~~~~--~~~--------------  332 (392)
                      ++.+...   ......|+..|++ ||...       ..|+|+.|+++ +++.+..++....  ...              
T Consensus       144 ~~~~~~~---~~~~~~~~~~y~a-PE~~~~~~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~  219 (278)
T cd05606         144 ACDFSKK---KPHASVGTHGYMA-PEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELP  219 (278)
T ss_pred             ccccCcc---CCcCcCCCcCCcC-cHHhcCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCccchHHHHHHhhccCCCCC
Confidence            8765321   1122468899999 66542       46999999876 5555543332220  111              


Q ss_pred             --HHHHHHHHHHhhcccCcCCCC-----CHHHHHHH
Q 045577          333 --ELVKCIEVGLLCVQQRIEDWP-----TMSSVLTM  361 (392)
Q Consensus       333 --~~~~~~~i~~~Cl~~dp~~RP-----sm~eVv~~  361 (392)
                        ....+.+++..|++.+|.+||     ++.++++.
T Consensus       220 ~~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~~  255 (278)
T cd05606         220 DSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKEH  255 (278)
T ss_pred             CcCCHHHHHHHHHHhhcCHHhccCCCCCCHHHHHhC
Confidence              123566788899999999999     88888753

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co

>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

Probab=99.70  E-value=2.1e-17  Score=152.13  Aligned_cols=170  Identities=21%  Similarity=0.294  Sum_probs=122.4

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEc
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLD  264 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~  264 (392)
                      ++++++.....+.++..+++|||++++++....... ....+..+..++.|++.||.|||+.   +++|+||||+||+++
T Consensus        58 ~~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~-~~l~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~ni~i~  133 (254)
T cd06627          58 HPNIVKYIGSIETSDSLYIILEYAENGSLRQIIKKF-GPFPESLVAVYVYQVLQGLAYLHEQ---GVIHRDIKAANILTT  133 (254)
T ss_pred             CCCccEEEEEEEeCCEEEEEEecCCCCcHHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHhhC---CcccCCCCHHHEEEC
Confidence            334444433334456789999999998887655443 2335555788999999999999998   899999999999999


Q ss_pred             CCCCCeEeeeeceEEeCCCCcceeceeeecccccCchhHH------HHHHHhcCCCcc-eeecccccCCCCCCH------
Q 045577          265 AEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIIDEQTKMKGPFSA------  331 (392)
Q Consensus       265 ~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld~~~~~~~~~~~------  331 (392)
                      .++.+||+|||++......... .....++..|++ ||..      ...|+|+.|.++ +++.+...+......      
T Consensus       134 ~~~~~~l~d~~~~~~~~~~~~~-~~~~~~~~~y~~-pe~~~~~~~~~~~Dv~~lG~~l~~l~~g~~p~~~~~~~~~~~~~  211 (254)
T cd06627         134 KDGVVKLADFGVATKLNDVSKD-DASVVGTPYWMA-PEVIEMSGASTASDIWSLGCTVIELLTGNPPYYDLNPMAALFRI  211 (254)
T ss_pred             CCCCEEEeccccceecCCCccc-ccccccchhhcC-HhhhcCCCCCcchhHHHHHHHHHHHHhCCCCCCCccHHHHHHHH
Confidence            9999999999999876532221 223467888998 6654      468999999765 454443332211111      


Q ss_pred             ----------HHHHHHHHHHHhhcccCcCCCCCHHHHHH
Q 045577          332 ----------DELVKCIEVGLLCVQQRIEDWPTMSSVLT  360 (392)
Q Consensus       332 ----------~~~~~~~~i~~~Cl~~dp~~RPsm~eVv~  360 (392)
                                .....+.+++.+|++.+|++||++.+++.
T Consensus       212 ~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~  250 (254)
T cd06627         212 VQDDHPPLPEGISPELKDFLMQCFQKDPNLRPTAKQLLK  250 (254)
T ss_pred             hccCCCCCCCCCCHHHHHHHHHHHhCChhhCcCHHHHhc
Confidence                      11235667888999999999999999874

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast

>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

Probab=99.70  E-value=3e-17  Score=156.02  Aligned_cols=157  Identities=24%  Similarity=0.298  Sum_probs=111.4

Q ss_pred             CCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEcCCCCCeEeeeeceE
Q 045577          199 GEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEINPNISDFGPAR  278 (392)
Q Consensus       199 ~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~~~~~~kl~DFGla~  278 (392)
                      ...++++||+.. ++...............+..++.|+++||.|||+.   +++|+||||+||+++.++.+||+|||+++
T Consensus        88 ~~~~lv~~~~~~-~l~~~~~~~~~~~~~~~~~~i~~~l~~al~~lH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~~~  163 (311)
T cd07866          88 GSVYMVTPYMDH-DLSGLLENPSVKLTESQIKCYMLQLLEGINYLHEN---HILHRDIKAANILIDNQGILKIADFGLAR  163 (311)
T ss_pred             ceEEEEEecCCc-CHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEECcCccch
Confidence            457999999875 33332222223345566788999999999999998   89999999999999999999999999997


Q ss_pred             EeCCCCc----------ceeceeeecccccCchhHH-------HHHHHhcCCCcc-eeecccccCCCCCCHH--------
Q 045577          279 IFGDQTE----------EVTGRVIGTQTLKTVPELL-------QAWKLWSEGDPM-EIIDEQTKMKGPFSAD--------  332 (392)
Q Consensus       279 ~~~~~~~----------~~~~~~~gt~~y~a~~~~~-------~~~diws~G~v~-~~ld~~~~~~~~~~~~--------  332 (392)
                      .......          .......+++.|+| ||..       .+.|+|+.|+++ +++.+.+.+.+.....        
T Consensus       164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~a-PE~~~~~~~~~~~~Dv~slG~il~el~~g~~~~~~~~~~~~~~~~~~~  242 (311)
T cd07866         164 PYDGPPPNPKGGGGGGTRKYTNLVVTRWYRP-PELLLGERRYTTAVDIWGIGCVFAEMFTRRPILQGKSDIDQLHLIFKL  242 (311)
T ss_pred             hccCCCcccccCCcccccccccceeccCcCC-hHHhhCCCccCchhHhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHH
Confidence            6542111          11122467888999 6643       357999999876 4555433322111100        


Q ss_pred             -------------------------------------HHHHHHHHHHhhcccCcCCCCCHHHHHH
Q 045577          333 -------------------------------------ELVKCIEVGLLCVQQRIEDWPTMSSVLT  360 (392)
Q Consensus       333 -------------------------------------~~~~~~~i~~~Cl~~dp~~RPsm~eVv~  360 (392)
                                                           ....+.+++.+|++.+|++||++.++++
T Consensus       243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~t~~ell~  307 (311)
T cd07866         243 CGTPTEETWPGWRSLPGCEGVHSFTNYPRTLEERFGKLGPEGLDLLSKLLSLDPYKRLTASDALE  307 (311)
T ss_pred             hCCCChhhchhhhhcccccccccCCCCCccHHHHcccCChhHHHHHHHHcccCcccCcCHHHHhc
Confidence                                                 1134667888999999999999988874

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic

>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]

Probab=99.70  E-value=8.6e-18  Score=150.78  Aligned_cols=132  Identities=25%  Similarity=0.317  Sum_probs=97.9

Q ss_pred             cchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEcCCCCCeEeeeeceEEeCCCCcceeceeeecccccCchhH-
Q 045577          225 YSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPEL-  303 (392)
Q Consensus       225 ~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~-  303 (392)
                      ++..+-++...+.+||.||.+++  +|||||+||+|||+|+.|.+|++|||++..+.+.  ...++..|++.||| ||- 
T Consensus       189 PE~ilGk~tva~v~AL~YLKeKH--~viHRDvKPSNILlDe~GniKlCDFGIsGrlvdS--kAhtrsAGC~~YMa-PERi  263 (391)
T KOG0983|consen  189 PERILGKMTVAIVKALYYLKEKH--GVIHRDVKPSNILLDERGNIKLCDFGISGRLVDS--KAHTRSAGCAAYMA-PERI  263 (391)
T ss_pred             hHHhhhhhHHHHHHHHHHHHHhc--ceeecccCccceEEccCCCEEeecccccceeecc--cccccccCCccccC-cccc
Confidence            44445667788899999999887  8999999999999999999999999999876533  23344689999999 442 


Q ss_pred             --------HHHHHHhcCCCcc-eeecccccCCCCCCHH-------------------HHHHHHHHHHhhcccCcCCCCCH
Q 045577          304 --------LQAWKLWSEGDPM-EIIDEQTKMKGPFSAD-------------------ELVKCIEVGLLCVQQRIEDWPTM  355 (392)
Q Consensus       304 --------~~~~diws~G~v~-~~ld~~~~~~~~~~~~-------------------~~~~~~~i~~~Cl~~dp~~RPsm  355 (392)
                              .-..|+||+|..+ |+..++.++.+....-                   -...++++...|++.|+.+||..
T Consensus       264 dp~~~~kYDiRaDVWSlGITlveLaTg~yPy~~c~tdFe~ltkvln~ePP~L~~~~gFSp~F~~fv~~CL~kd~r~RP~Y  343 (391)
T KOG0983|consen  264 DPPDKPKYDIRADVWSLGITLVELATGQYPYKGCKTDFEVLTKVLNEEPPLLPGHMGFSPDFQSFVKDCLTKDHRKRPKY  343 (391)
T ss_pred             CCCCCCccchhhhhhhhccchhhhhcccCCCCCCCccHHHHHHHHhcCCCCCCcccCcCHHHHHHHHHHhhcCcccCcch
Confidence                    2467999999865 5555533333211110                   12245667779999999999999


Q ss_pred             HHHHHH
Q 045577          356 SSVLTM  361 (392)
Q Consensus       356 ~eVv~~  361 (392)
                      .++++.
T Consensus       344 ~~Ll~h  349 (391)
T KOG0983|consen  344 NKLLEH  349 (391)
T ss_pred             HHHhcC
Confidence            887753

>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

Probab=99.70  E-value=1.8e-17  Score=156.59  Aligned_cols=166  Identities=17%  Similarity=0.146  Sum_probs=121.1

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEc
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLD  264 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~  264 (392)
                      |+++++.......++..|++|||++++++.....+.. ......+..++.|++.||.|||+.   +++|+||+|.||+++
T Consensus        60 h~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~-~l~~~~~~~~~~qil~~l~~lH~~---~i~H~dl~p~nili~  135 (290)
T cd05580          60 HPFLVNLYGSFQDDSNLYLVMEYVPGGELFSHLRKSG-RFPEPVARFYAAQVVLALEYLHSL---DIVYRDLKPENLLLD  135 (290)
T ss_pred             CCCccceeeEEEcCCeEEEEEecCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEEC
Confidence            5566655555444667899999999988876554443 234445778899999999999998   899999999999999


Q ss_pred             CCCCCeEeeeeceEEeCCCCcceeceeeecccccCchhHH------HHHHHhcCCCcc-eeecccccCCCCCCHH-----
Q 045577          265 AEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIIDEQTKMKGPFSAD-----  332 (392)
Q Consensus       265 ~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld~~~~~~~~~~~~-----  332 (392)
                      .++.+||+|||+++.....    .....+++.|++ ||..      ...|+|+.|+++ +++.+...+......+     
T Consensus       136 ~~~~~kl~dfg~~~~~~~~----~~~~~~~~~y~a-PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~  210 (290)
T cd05580         136 SDGYIKITDFGFAKRVKGR----TYTLCGTPEYLA-PEIILSKGYGKAVDWWALGILIYEMLAGYPPFFDDNPIQIYEKI  210 (290)
T ss_pred             CCCCEEEeeCCCccccCCC----CCCCCCCccccC-hhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH
Confidence            9999999999998876432    223467889999 6654      357999999865 5555543332221111     


Q ss_pred             ----------HHHHHHHHHHhhcccCcCCCC-----CHHHHH
Q 045577          333 ----------ELVKCIEVGLLCVQQRIEDWP-----TMSSVL  359 (392)
Q Consensus       333 ----------~~~~~~~i~~~Cl~~dp~~RP-----sm~eVv  359 (392)
                                ....+.+++..|++.+|.+||     ++.+++
T Consensus       211 ~~~~~~~~~~~~~~l~~li~~~l~~~p~~R~~~~~~~~~~l~  252 (290)
T cd05580         211 LEGKVRFPSFFSPDAKDLIRNLLQVDLTKRLGNLKNGVNDIK  252 (290)
T ss_pred             hcCCccCCccCCHHHHHHHHHHccCCHHHccCcccCCHHHHH
Confidence                      123455788899999999998     666655

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi

>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase

Probab=99.70  E-value=3.2e-17  Score=159.56  Aligned_cols=153  Identities=22%  Similarity=0.270  Sum_probs=109.8

Q ss_pred             CCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEcCCCCCeEeeeeceE
Q 045577          199 GEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEINPNISDFGPAR  278 (392)
Q Consensus       199 ~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~~~~~~kl~DFGla~  278 (392)
                      ...|++|||+.+ ++.......   .....+..++.|++.||.|||+.   +++||||||+||+++.++.+||+|||+++
T Consensus        94 ~~~~lv~e~~~~-~l~~~~~~~---l~~~~~~~~~~ql~~aL~~LH~~---gi~H~dlkp~Nil~~~~~~~kL~Dfg~~~  166 (353)
T cd07850          94 QDVYLVMELMDA-NLCQVIQMD---LDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLAR  166 (353)
T ss_pred             CcEEEEEeccCC-CHHHHHhhc---CCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEECCCCCEEEccCccce
Confidence            457999999975 433322211   33444677899999999999998   89999999999999999999999999998


Q ss_pred             EeCCCCcceeceeeecccccCchhHHH------HHHHhcCCCcc-eeecccccCCCCC----------------------
Q 045577          279 IFGDQTEEVTGRVIGTQTLKTVPELLQ------AWKLWSEGDPM-EIIDEQTKMKGPF----------------------  329 (392)
Q Consensus       279 ~~~~~~~~~~~~~~gt~~y~a~~~~~~------~~diws~G~v~-~~ld~~~~~~~~~----------------------  329 (392)
                      ......  ......++..|+| ||...      +.|+|+.|+++ +++.++..+....                      
T Consensus       167 ~~~~~~--~~~~~~~~~~y~a-PE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (353)
T cd07850         167 TAGTSF--MMTPYVVTRYYRA-PEVILGMGYKENVDIWSVGCIMGEMIRGTVLFPGTDHIDQWNKIIEQLGTPSDEFMSR  243 (353)
T ss_pred             eCCCCC--CCCCCcccccccC-HHHHhCCCCCCchhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHH
Confidence            754321  1223467888999 76553      57999999876 4443322221100                      


Q ss_pred             ------------------------------------CHHHHHHHHHHHHhhcccCcCCCCCHHHHHHH
Q 045577          330 ------------------------------------SADELVKCIEVGLLCVQQRIEDWPTMSSVLTM  361 (392)
Q Consensus       330 ------------------------------------~~~~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~  361 (392)
                                                          .......+.+++.+|++.||++||++.++++.
T Consensus       244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eiL~~  311 (353)
T cd07850         244 LQPTVRNYVENRPKYAGYSFEELFPDVLFPPDSESHNKLKASQARDLLSKMLVIDPEKRISVDDALQH  311 (353)
T ss_pred             hhhhhhHHhhcCCCCCCcchhhhCcccccCcccccccccchhHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence                                                00112345678889999999999999999865

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK

>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

Probab=99.70  E-value=1.1e-17  Score=159.47  Aligned_cols=167  Identities=21%  Similarity=0.233  Sum_probs=116.7

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEc
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLD  264 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~  264 (392)
                      |++.++.......++..|++|||+.+. +............+..+..++.|++.||.|||+.   +++|+||+|+||+++
T Consensus        74 h~niv~~~~~~~~~~~~~lv~e~~~g~-l~~~~~~~~~~l~~~~~~~~~~ql~~~L~~LH~~---~i~H~dl~p~nIl~~  149 (307)
T cd06607          74 HPNTIEYKGCYLREHTAWLVMEYCLGS-ASDILEVHKKPLQEVEIAAICHGALQGLAYLHSH---ERIHRDIKAGNILLT  149 (307)
T ss_pred             CCCEEEEEEEEEeCCeEEEEHHhhCCC-HHHHHHHcccCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCcccEEEC
Confidence            444444433333356789999999854 3222221112234555788999999999999998   899999999999999


Q ss_pred             CCCCCeEeeeeceEEeCCCCcceeceeeecccccCchhHH---------HHHHHhcCCCcc-eeecccccCCCCC-----
Q 045577          265 AEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELL---------QAWKLWSEGDPM-EIIDEQTKMKGPF-----  329 (392)
Q Consensus       265 ~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~---------~~~diws~G~v~-~~ld~~~~~~~~~-----  329 (392)
                      .++.+||+|||++......     ....++..|++ ||..         ...|+|+.|+++ +++.+.+.+....     
T Consensus       150 ~~~~~kL~dfg~~~~~~~~-----~~~~~~~~y~a-PE~~~~~~~~~~~~~sDv~s~G~il~el~tg~~p~~~~~~~~~~  223 (307)
T cd06607         150 EPGTVKLADFGSASLVSPA-----NSFVGTPYWMA-PEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSAL  223 (307)
T ss_pred             CCCCEEEeecCcceecCCC-----CCccCCccccC-ceeeeccCCCCCCcccchHHHHHHHHHHHcCCCCCCCccHHHHH
Confidence            9999999999998765321     12457778888 5543         367999999876 5555533322111     


Q ss_pred             ------------CHHHHHHHHHHHHhhcccCcCCCCCHHHHHHH
Q 045577          330 ------------SADELVKCIEVGLLCVQQRIEDWPTMSSVLTM  361 (392)
Q Consensus       330 ------------~~~~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~  361 (392)
                                  .......+.+++..|++.+|++||++.+|+..
T Consensus       224 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~  267 (307)
T cd06607         224 YHIAQNDSPTLSSNDWSDYFRNFVDSCLQKIPQDRPSSEELLKH  267 (307)
T ss_pred             HHHhcCCCCCCCchhhCHHHHHHHHHHhcCChhhCcCHHHHhcC
Confidence                        11223456778889999999999999999875

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily

>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases

Probab=99.69  E-value=5.3e-17  Score=156.83  Aligned_cols=160  Identities=23%  Similarity=0.339  Sum_probs=114.2

Q ss_pred             CCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEcCCCCCeEeeeeceE
Q 045577          199 GEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEINPNISDFGPAR  278 (392)
Q Consensus       199 ~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~~~~~~kl~DFGla~  278 (392)
                      ...|+++||+.+ ++......  .......+..++.|++.||.|||+.   +++||||||+||+++.++.+||+|||+++
T Consensus        81 ~~~~lv~e~~~~-~l~~~~~~--~~l~~~~~~~i~~ql~~aL~~LH~~---~ivH~dlkp~Nill~~~~~~kl~dfg~~~  154 (336)
T cd07849          81 NDVYIVQELMET-DLYKLIKT--QHLSNDHIQYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTNCDLKICDFGLAR  154 (336)
T ss_pred             ceEEEEehhccc-CHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHEEECCCCCEEECccccee
Confidence            457999999985 44332221  1234445788999999999999998   89999999999999999999999999998


Q ss_pred             EeCCCC--cceeceeeecccccCchhHH-------HHHHHhcCCCcc-eeecccccCCCCCC---------------H--
Q 045577          279 IFGDQT--EEVTGRVIGTQTLKTVPELL-------QAWKLWSEGDPM-EIIDEQTKMKGPFS---------------A--  331 (392)
Q Consensus       279 ~~~~~~--~~~~~~~~gt~~y~a~~~~~-------~~~diws~G~v~-~~ld~~~~~~~~~~---------------~--  331 (392)
                      ......  ........|+..|+| ||..       ...|+|+.|+++ +++.+++.+.+...               .  
T Consensus       155 ~~~~~~~~~~~~~~~~~~~~y~a-PE~~~~~~~~~~~~DvwslGvil~el~~G~~~f~~~~~~~~~~~~~~~~~~~~~~~  233 (336)
T cd07849         155 IADPEHDHTGFLTEYVATRWYRA-PEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLFPGKDYLHQLNLILGVLGTPSQED  233 (336)
T ss_pred             eccccccccCCcCCcCcCCCccC-hHHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCCHHH
Confidence            754211  111223567889999 6643       267999999876 55555433321100               0  


Q ss_pred             -----------------------------HHHHHHHHHHHhhcccCcCCCCCHHHHHHH--HccC
Q 045577          332 -----------------------------DELVKCIEVGLLCVQQRIEDWPTMSSVLTM--LSNE  365 (392)
Q Consensus       332 -----------------------------~~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~--L~~~  365 (392)
                                                   .....+.+++.+|++.+|++||++.++++.  ++..
T Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~e~l~hp~~~~~  298 (336)
T cd07849         234 LNCIISLRARNYIKSLPFKPKVPWNKLFPNADPKALDLLDKMLTFNPHKRITVEEALAHPYLEQY  298 (336)
T ss_pred             HHHhhchhhhhHHhhcCcCCcccHHHHhcccCcHHHHHHHHHcCCChhhCcCHHHHhcCcccccc
Confidence                                         011245678889999999999999999987  5544

Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase

>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta

Probab=99.69  E-value=2.5e-17  Score=158.62  Aligned_cols=173  Identities=18%  Similarity=0.230  Sum_probs=117.4

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhc-cccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEE
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFEC-SKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLL  263 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~-~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll  263 (392)
                      |++.++.......++..+++|||+.++++.....+... ......+..++.|++.||.|||+.   +++||||||+||++
T Consensus        58 h~niv~~~~~~~~~~~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~---~ivHrDlkp~Nill  134 (328)
T cd08226          58 HPNIMTSWTVFTTGSWLWVISPFMAYGSANSLLKTYFPEGMSEALIGNILFGALRGLNYLHQN---GYIHRNIKASHILI  134 (328)
T ss_pred             CCCcceEeeeEecCCceEEEEecccCCCHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEE
Confidence            44444444444445678999999999888765443221 124444678999999999999988   89999999999999


Q ss_pred             cCCCCCeEeeeeceEEeCCCCcc------eeceeeecccccCchhHH--------HHHHHhcCCCcc-eeecccccCCCC
Q 045577          264 DAEINPNISDFGPARIFGDQTEE------VTGRVIGTQTLKTVPELL--------QAWKLWSEGDPM-EIIDEQTKMKGP  328 (392)
Q Consensus       264 ~~~~~~kl~DFGla~~~~~~~~~------~~~~~~gt~~y~a~~~~~--------~~~diws~G~v~-~~ld~~~~~~~~  328 (392)
                      +.++.+|++||+.+.........      ......++..|++ ||+.        ...|+|+.|+++ +++.+..++...
T Consensus       135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~a-PE~~~~~~~~~~~~~DiwslG~~l~el~~g~~p~~~~  213 (328)
T cd08226         135 SGDGLVSLSGLSHLYSLVRNGQKAKVVYDFPQFSTSVLPWLS-PELLRQDLYGYNVKSDIYSVGITACELATGRVPFQDM  213 (328)
T ss_pred             eCCCcEEEechHHHhhhhccCccccccccccccccCccCccC-hhhhcCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCc
Confidence            99999999999754332110000      0011224556888 6654        357999999876 444443332211


Q ss_pred             C--------------------------------------------------------------CHHHHHHHHHHHHhhcc
Q 045577          329 F--------------------------------------------------------------SADELVKCIEVGLLCVQ  346 (392)
Q Consensus       329 ~--------------------------------------------------------------~~~~~~~~~~i~~~Cl~  346 (392)
                      .                                                              .......+.+++.+|++
T Consensus       214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~  293 (328)
T cd08226         214 LRTQMLLQKLKGPPYSPLDITTFPCEESRMKNSQSGVDSGIGESVVAAGMTQTMTSERLRTPSSKTFSPAFQNLVELCLQ  293 (328)
T ss_pred             ChHHHHHHHhcCCCCCCccccccchhhhhhccchhhhhcccccchhccccccccccccccchhhhhhhHHHHHHHHHHcc
Confidence            0                                                              01123356788899999


Q ss_pred             cCcCCCCCHHHHHHH
Q 045577          347 QRIEDWPTMSSVLTM  361 (392)
Q Consensus       347 ~dp~~RPsm~eVv~~  361 (392)
                      .||++|||+.++++.
T Consensus       294 ~dP~~Rpta~e~l~~  308 (328)
T cd08226         294 QDPEKRPSASSLLSH  308 (328)
T ss_pred             CCcccCCCHHHHhhC
Confidence            999999999999754

Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig

>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1

Probab=99.69  E-value=3.2e-17  Score=157.11  Aligned_cols=169  Identities=20%  Similarity=0.234  Sum_probs=118.4

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEc
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLD  264 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~  264 (392)
                      |++.++.......+...|++|||+.+ ++............+..+..++.|++.||.|||+.   +++|+||+|+||+++
T Consensus        84 h~~iv~~~~~~~~~~~~~lv~e~~~g-~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~---~i~H~dL~p~Nil~~  159 (317)
T cd06635          84 HPNSIEYKGCYLREHTAWLVMEYCLG-SASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSH---NMIHRDIKAGNILLT  159 (317)
T ss_pred             CCCEEEEEEEEeeCCeEEEEEeCCCC-CHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcccEEEC
Confidence            44444444433345678999999975 44333322222234555788999999999999998   899999999999999


Q ss_pred             CCCCCeEeeeeceEEeCCCCcceeceeeecccccCchhHH---------HHHHHhcCCCcc-eeecccccCCCCCC----
Q 045577          265 AEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELL---------QAWKLWSEGDPM-EIIDEQTKMKGPFS----  330 (392)
Q Consensus       265 ~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~---------~~~diws~G~v~-~~ld~~~~~~~~~~----  330 (392)
                      .++.+||+|||++.....     .....|+..|++ ||..         .+.|+|+.|+++ +++.+..++.....    
T Consensus       160 ~~~~~kl~dfg~~~~~~~-----~~~~~~~~~y~a-PE~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~  233 (317)
T cd06635         160 EPGQVKLADFGSASIASP-----ANSFVGTPYWMA-PEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSAL  233 (317)
T ss_pred             CCCCEEEecCCCccccCC-----cccccCCccccC-hhhhhcCCCCCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHH
Confidence            999999999998865432     122457888998 6653         257999999876 45555333221111    


Q ss_pred             -------------HHHHHHHHHHHHhhcccCcCCCCCHHHHHHHHc
Q 045577          331 -------------ADELVKCIEVGLLCVQQRIEDWPTMSSVLTMLS  363 (392)
Q Consensus       331 -------------~~~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~L~  363 (392)
                                   ......+.+++.+|++.+|.+||++.+|++.+-
T Consensus       234 ~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~  279 (317)
T cd06635         234 YHIAQNESPTLQSNEWSDYFRNFVDSCLQKIPQDRPTSEELLKHMF  279 (317)
T ss_pred             HHHHhccCCCCCCccccHHHHHHHHHHccCCcccCcCHHHHHhChh
Confidence                         112234667888999999999999999998654

Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron

>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]

Probab=99.69  E-value=1.6e-17  Score=164.93  Aligned_cols=148  Identities=24%  Similarity=0.291  Sum_probs=117.6

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhc-cccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEE
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFEC-SKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLL  263 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~-~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll  263 (392)
                      ..+|||..+.+--.+..|+|+|..+. +|.++++...- ......+..|+.||+.||.+||+.   +|||+||||+||||
T Consensus       247 ~~n~Vrm~d~F~fr~HlciVfELL~~-NLYellK~n~f~Glsl~~ir~~~~Qil~~L~~L~~l---~IIHcDLKPENILL  322 (586)
T KOG0667|consen  247 KYNIVRMLDYFYFRNHLCIVFELLST-NLYELLKNNKFRGLSLPLVRKFAQQILTALLFLHEL---GIIHCDLKPENILL  322 (586)
T ss_pred             CeeEEEeeeccccccceeeeehhhhh-hHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeccCChhheee
Confidence            56899998887767899999999985 44444444332 234555789999999999999988   89999999999999


Q ss_pred             cCC--CCCeEeeeeceEEeCCCCcceeceeeecccccCchhHH------HHHHHhcCCCcc-eeecccccCCCCCCHHHH
Q 045577          264 DAE--INPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIIDEQTKMKGPFSADEL  334 (392)
Q Consensus       264 ~~~--~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld~~~~~~~~~~~~~~  334 (392)
                      ...  ..+||+|||.+......   .. +..-++.|.| ||+.      .+.|+||+||++ |++.+.+.++++...+++
T Consensus       323 ~~~~r~~vKVIDFGSSc~~~q~---vy-tYiQSRfYRA-PEVILGlpY~~~IDmWSLGCIlAEL~tG~PLfpG~ne~DQl  397 (586)
T KOG0667|consen  323 KDPKRSRIKVIDFGSSCFESQR---VY-TYIQSRFYRA-PEVILGLPYDTAIDMWSLGCILAELFTGEPLFPGDNEYDQL  397 (586)
T ss_pred             ccCCcCceeEEecccccccCCc---ce-eeeecccccc-chhhccCCCCCccceeehhhhHHhHhcCccccCCCCHHHHH
Confidence            643  46899999999875421   11 4667888889 7765      478999999987 889998999999889999


Q ss_pred             HHHHHHH
Q 045577          335 VKCIEVG  341 (392)
Q Consensus       335 ~~~~~i~  341 (392)
                      .+++++.
T Consensus       398 ~~I~e~l  404 (586)
T KOG0667|consen  398 ARIIEVL  404 (586)
T ss_pred             HHHHHHh
Confidence            9888743

>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1

Probab=99.69  E-value=1.9e-17  Score=156.24  Aligned_cols=158  Identities=19%  Similarity=0.196  Sum_probs=112.5

Q ss_pred             CCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEcCCCCCeEeeeece
Q 045577          198 DGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEINPNISDFGPA  277 (392)
Q Consensus       198 ~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~~~~~~kl~DFGla  277 (392)
                      ++..|+++||++++++......... .....+..++.|++.||.|||+.   +++||||||+||+++.++.+||+|||++
T Consensus        77 ~~~~~lv~e~~~~~~L~~~l~~~~~-l~~~~~~~~~~qi~~al~~lH~~---~i~H~dl~p~nil~~~~~~~kl~dfg~~  152 (290)
T cd05613          77 DTKLHLILDYINGGELFTHLSQRER-FKEQEVQIYSGEIVLALEHLHKL---GIIYRDIKLENILLDSNGHVVLTDFGLS  152 (290)
T ss_pred             CCeEEEEEecCCCCcHHHHHHHcCC-CCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeEECCCCCEEEeeCccc
Confidence            4567899999999988775544332 24455677888999999999998   8999999999999999999999999999


Q ss_pred             EEeCCCCcceeceeeecccccCchhHH--------HHHHHhcCCCcc-eeecccccCCCC-------------------C
Q 045577          278 RIFGDQTEEVTGRVIGTQTLKTVPELL--------QAWKLWSEGDPM-EIIDEQTKMKGP-------------------F  329 (392)
Q Consensus       278 ~~~~~~~~~~~~~~~gt~~y~a~~~~~--------~~~diws~G~v~-~~ld~~~~~~~~-------------------~  329 (392)
                      +..............|+..|++ ||..        ...|+|+.|+++ +++.+...+...                   .
T Consensus       153 ~~~~~~~~~~~~~~~~~~~y~a-PE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~  231 (290)
T cd05613         153 KEFHEDEVERAYSFCGTIEYMA-PDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFTVDGEKNSQAEISRRILKSEPPY  231 (290)
T ss_pred             eecccccccccccccCCcccCC-hhhccCCCCCCCccccHHHHHHHHHHHhcCCCCCCcCCccccHHHHHHHhhccCCCC
Confidence            8754322222223568889999 6644        357999999876 455543332111                   0


Q ss_pred             CHHHHHHHHHHHHhhcccCcCCCC-----CHHHHHH
Q 045577          330 SADELVKCIEVGLLCVQQRIEDWP-----TMSSVLT  360 (392)
Q Consensus       330 ~~~~~~~~~~i~~~Cl~~dp~~RP-----sm~eVv~  360 (392)
                      +......+.+++..|++.+|++||     ++.++..
T Consensus       232 ~~~~~~~~~~ll~~~l~~~p~~R~~~~~~~~~~l~~  267 (290)
T cd05613         232 PQEMSALAKDIIQRLLMKDPKKRLGCGPSDADEIKK  267 (290)
T ss_pred             CccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHc
Confidence            001112355677899999999997     5555544

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>PLN00181 protein SPA1-RELATED; Provisional

Probab=99.69  E-value=1.1e-17  Score=179.34  Aligned_cols=157  Identities=11%  Similarity=0.058  Sum_probs=105.9

Q ss_pred             CeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEcC--------------
Q 045577          200 EVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDA--------------  265 (392)
Q Consensus       200 ~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~~--------------  265 (392)
                      ....+||++.. +|...............++.++.||++||.|||++   +|+||||||+|||++.              
T Consensus        54 ~~~~~~e~~~~-~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~---gIvHrDlKP~NiLl~~~~~~k~~d~~~~~~  129 (793)
T PLN00181         54 SIVRALECEDV-SLRQWLDNPDRSVDAFECFHVFRQIVEIVNAAHSQ---GIVVHNVRPSCFVMSSFNHVSFIESASCSD  129 (793)
T ss_pred             hhhhhhccCCc-cHHHHHhcccccccHHHHHHHHHHHHHHHHHHHhC---CeeeccCCchhEEEcccCcEEEeeccccCc
Confidence            35667887754 66665544333345555889999999999999998   8999999999999954              


Q ss_pred             -----CCCCeEeeeeceEEeCCCC---------------cceeceeeecccccCchhHH------HHHHHhcCCCcc-ee
Q 045577          266 -----EINPNISDFGPARIFGDQT---------------EEVTGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EI  318 (392)
Q Consensus       266 -----~~~~kl~DFGla~~~~~~~---------------~~~~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~  318 (392)
                           ++.+|++|||+++......               ........||+.||| ||+.      .+.|+|++|+++ |+
T Consensus       130 ~~~~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~A-PE~~~~~~~~~~sDVwSlGviL~EL  208 (793)
T PLN00181        130 SGSDEDATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQILAMEMSWYTS-PEEDNGSSSNCASDVYRLGVLLFEL  208 (793)
T ss_pred             ccccccCcccccccccccccccccccchhhhhccccCCCcccccccCCCcceEC-hhhhccCCCCchhhhhhHHHHHHHH
Confidence                 4556777788776432100               000112457889999 6654      478999999986 55


Q ss_pred             ecccccCCCCC-----------C---HHHHHHHHHHHHhhcccCcCCCCCHHHHHHH
Q 045577          319 IDEQTKMKGPF-----------S---ADELVKCIEVGLLCVQQRIEDWPTMSSVLTM  361 (392)
Q Consensus       319 ld~~~~~~~~~-----------~---~~~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~  361 (392)
                      +.+.+......           +   .....+...++.+|++.+|.+||+|.+|++.
T Consensus       209 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~P~~Rps~~eil~h  265 (793)
T PLN00181        209 FCPVSSREEKSRTMSSLRHRVLPPQILLNWPKEASFCLWLLHPEPSCRPSMSELLQS  265 (793)
T ss_pred             hhCCCchhhHHHHHHHHHHhhcChhhhhcCHHHHHHHHHhCCCChhhCcChHHHhhc
Confidence            54422211100           0   0112344567788999999999999999864

>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2

Probab=99.69  E-value=5.1e-17  Score=155.04  Aligned_cols=155  Identities=21%  Similarity=0.271  Sum_probs=111.7

Q ss_pred             CCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEcCCCCCeEeeeece
Q 045577          198 DGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEINPNISDFGPA  277 (392)
Q Consensus       198 ~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~~~~~~kl~DFGla  277 (392)
                      ....+++|||+.+ .+........-......+..++.|++.||.|||+.   +++|+||||+||+++.++.+||+|||++
T Consensus        87 ~~~~~lv~e~~~~-~l~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~---~i~H~dl~p~nil~~~~~~~kl~dfg~~  162 (308)
T cd06634          87 EHTAWLVMEYCLG-SASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSH---NMIHRDVKAGNILLSEPGLVKLGDFGSA  162 (308)
T ss_pred             CCeeEEEEEccCC-CHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHhEEECCCCcEEECCcccc
Confidence            4578999999974 54433222221234455788899999999999998   8999999999999999999999999998


Q ss_pred             EEeCCCCcceeceeeecccccCchhHHH---------HHHHhcCCCcc-eeecccccCCCCCC-----------------
Q 045577          278 RIFGDQTEEVTGRVIGTQTLKTVPELLQ---------AWKLWSEGDPM-EIIDEQTKMKGPFS-----------------  330 (392)
Q Consensus       278 ~~~~~~~~~~~~~~~gt~~y~a~~~~~~---------~~diws~G~v~-~~ld~~~~~~~~~~-----------------  330 (392)
                      ......     ....++..|+| ||...         +.|+|+.|+++ +++.+..++.....                 
T Consensus       163 ~~~~~~-----~~~~~~~~y~a-PE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~  236 (308)
T cd06634         163 SIMAPA-----NXFVGTPYWMA-PEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPALQS  236 (308)
T ss_pred             eeecCc-----ccccCCccccC-HHHHhhcccCCCCcccchHHHHHHHHHHHcCCCCCccccHHHHHHHHhhcCCCCcCc
Confidence            765421     22457888999 66542         56999999876 44444322211110                 


Q ss_pred             HHHHHHHHHHHHhhcccCcCCCCCHHHHHHHH
Q 045577          331 ADELVKCIEVGLLCVQQRIEDWPTMSSVLTML  362 (392)
Q Consensus       331 ~~~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~L  362 (392)
                      ......+.+++.+|++.+|++||++.+|++..
T Consensus       237 ~~~~~~~~~li~~cl~~~P~~Rp~~~~ll~~~  268 (308)
T cd06634         237 GHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHR  268 (308)
T ss_pred             ccccHHHHHHHHHHhhCCcccCCCHHHHhhCc
Confidence            11223456778899999999999999998764

Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin

>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7

Probab=99.69  E-value=3.1e-17  Score=155.41  Aligned_cols=171  Identities=22%  Similarity=0.277  Sum_probs=116.1

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEc
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLD  264 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~  264 (392)
                      |++.++.......+...|++|||+.. .+............+..+..++.|++.||.|||+..  +++||||+|+||+++
T Consensus        73 ~~~i~~~~~~~~~~~~~~~v~e~~~~-~l~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~--~i~H~dl~p~nill~  149 (296)
T cd06618          73 CPYIVKCYGYFITDSDVFICMELMST-CLDKLLKRIQGPIPEDILGKMTVAIVKALHYLKEKH--GVIHRDVKPSNILLD  149 (296)
T ss_pred             CCchHhhheeeecCCeEEEEeeccCc-CHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhhC--CEecCCCcHHHEEEc
Confidence            44445544444456789999999864 333322111112344446789999999999999732  799999999999999


Q ss_pred             CCCCCeEeeeeceEEeCCCCcceeceeeecccccCchhHH----------HHHHHhcCCCcc-eeecccccCCCCCC---
Q 045577          265 AEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELL----------QAWKLWSEGDPM-EIIDEQTKMKGPFS---  330 (392)
Q Consensus       265 ~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~----------~~~diws~G~v~-~~ld~~~~~~~~~~---  330 (392)
                      .++.+||+|||++..+......  ....++..|+| ||..          ...|+|+.|+++ +++.+..++.....   
T Consensus       150 ~~~~~kL~dfg~~~~~~~~~~~--~~~~~~~~y~a-PE~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~  226 (296)
T cd06618         150 ASGNVKLCDFGISGRLVDSKAK--TRSAGCAAYMA-PERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYKNCKTEFE  226 (296)
T ss_pred             CCCCEEECccccchhccCCCcc--cCCCCCccccC-HhhcCCCCCccccccchhHHHHHHHHHHHHhCCCCCCcchhHHH
Confidence            9999999999998765422111  22346778888 5543          357999999866 44444332211000   


Q ss_pred             ----------------HHHHHHHHHHHHhhcccCcCCCCCHHHHHHH
Q 045577          331 ----------------ADELVKCIEVGLLCVQQRIEDWPTMSSVLTM  361 (392)
Q Consensus       331 ----------------~~~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~  361 (392)
                                      ......+.+++.+|++.+|++||++.++++.
T Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~  273 (296)
T cd06618         227 VLTKILQEEPPSLPPNEGFSPDFCSFVDLCLTKDHRKRPKYRELLQH  273 (296)
T ss_pred             HHHHHhcCCCCCCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence                            0112356778889999999999999999865

Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it

>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

Probab=99.69  E-value=4.3e-17  Score=152.63  Aligned_cols=170  Identities=22%  Similarity=0.302  Sum_probs=121.9

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEc
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLD  264 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~  264 (392)
                      |++.++.....++.+..++++||++. ++.....+.........+..++.|++.||.|||+.   +++|+||+|+||+++
T Consensus        57 ~~~i~~~~~~~~~~~~~~~v~e~~~~-~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~~l~~~ni~~~  132 (282)
T cd07829          57 HPNIVKLLDVIHTERKLYLVFEYCDM-DLKKYLDKRPGPLSPNLIKSIMYQLLRGLAYCHSH---RILHRDLKPQNILIN  132 (282)
T ss_pred             CCCHHHHHhhhhcCCceEEEecCcCc-CHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChheEEEc
Confidence            55666555555556789999999984 66665544322345555789999999999999998   899999999999999


Q ss_pred             CCCCCeEeeeeceEEeCCCCcceeceeeecccccCchhHH-------HHHHHhcCCCcc-eeecccccCCCCCCHH----
Q 045577          265 AEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELL-------QAWKLWSEGDPM-EIIDEQTKMKGPFSAD----  332 (392)
Q Consensus       265 ~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~-------~~~diws~G~v~-~~ld~~~~~~~~~~~~----  332 (392)
                      .++.+||+|||+++....... ......++..|+| ||..       ...|+|+.|+++ +++.+.+.+......+    
T Consensus       133 ~~~~~~l~d~g~~~~~~~~~~-~~~~~~~~~~~~a-PE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~  210 (282)
T cd07829         133 RDGVLKLADFGLARAFGIPLR-TYTHEVVTLWYRA-PEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFPGDSEIDQLFK  210 (282)
T ss_pred             CCCCEEEecCCcccccCCCcc-ccCccccCcCcCC-hHHhcCCcCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHH
Confidence            999999999999987643221 1122345667888 6654       257999999866 4444433332211110    


Q ss_pred             ----------------------------------------HHHHHHHHHHhhcccCcCCCCCHHHHHH
Q 045577          333 ----------------------------------------ELVKCIEVGLLCVQQRIEDWPTMSSVLT  360 (392)
Q Consensus       333 ----------------------------------------~~~~~~~i~~~Cl~~dp~~RPsm~eVv~  360 (392)
                                                              ....+.+++..|++.+|++||++.+++.
T Consensus       211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~  278 (282)
T cd07829         211 IFQILGTPTEESWPGVTKLPDYKPTFPKFPPKDLEKVLPRLDPEGIDLLSKMLQYNPAKRISAKEALK  278 (282)
T ss_pred             HHHHhCCCcHHHHHhhcccccccccccccCccchHHhcccccHHHHHHHHHhhccCcccCCCHHHHhh
Confidence                                                    0235677888999999999999999875

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the

>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

Probab=99.69  E-value=3.5e-17  Score=150.57  Aligned_cols=171  Identities=22%  Similarity=0.324  Sum_probs=122.9

Q ss_pred             CCCccccccCcCCC--CCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeE
Q 045577          185 SGGCKRNWEADCGD--GEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVL  262 (392)
Q Consensus       185 s~GCvR~~~l~C~~--~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIl  262 (392)
                      |+++++........  ...++++||++++++........ ...+..+..++.|++.||.|||+.   +++|+|++|+||+
T Consensus        58 ~~~i~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~l~~~l~~lh~~---~~~h~dl~p~ni~  133 (260)
T cd06606          58 HPNIVRYYGSERDEEKNTLNIFLEYVSGGSLSSLLKKFG-KLPEPVIRKYTRQILEGLAYLHSN---GIVHRDIKGANIL  133 (260)
T ss_pred             CCCEeeEEEEEecCCCCeEEEEEEecCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEE
Confidence            34444443333333  56899999999888877655543 334455788999999999999997   8999999999999


Q ss_pred             EcCCCCCeEeeeeceEEeCCCCc-ceeceeeecccccCchhHH------HHHHHhcCCCcc-eeecccccCCCC------
Q 045577          263 LDAEINPNISDFGPARIFGDQTE-EVTGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIIDEQTKMKGP------  328 (392)
Q Consensus       263 l~~~~~~kl~DFGla~~~~~~~~-~~~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld~~~~~~~~------  328 (392)
                      ++.++.+||+|||.+........ .......++..|++ ||..      ...|+|+.|+++ +++.+...+...      
T Consensus       134 i~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~y~~-pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~  212 (260)
T cd06606         134 VDSDGVVKLADFGCAKRLGDIETGEGTGSVRGTPYWMA-PEVIRGEEYGRAADIWSLGCTVIEMATGKPPWSELGNPMAA  212 (260)
T ss_pred             EcCCCCEEEcccccEEecccccccccccCCCCCccccC-HhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchHHH
Confidence            99999999999999987653221 01223567788888 6654      468999999876 444433222111      


Q ss_pred             ------------CCHHHHHHHHHHHHhhcccCcCCCCCHHHHHH
Q 045577          329 ------------FSADELVKCIEVGLLCVQQRIEDWPTMSSVLT  360 (392)
Q Consensus       329 ------------~~~~~~~~~~~i~~~Cl~~dp~~RPsm~eVv~  360 (392)
                                  .+......+.+++.+|++.+|++||++.++++
T Consensus       213 ~~~~~~~~~~~~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~ll~  256 (260)
T cd06606         213 LYKIGSSGEPPEIPEHLSEEAKDFLRKCLRRDPKKRPTADELLQ  256 (260)
T ss_pred             HHhccccCCCcCCCcccCHHHHHHHHHhCcCChhhCCCHHHHhh
Confidence                        11122346777888999999999999999875

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK

>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=99.68  E-value=9.6e-18  Score=164.57  Aligned_cols=175  Identities=13%  Similarity=0.167  Sum_probs=127.4

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhh--hhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeE
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFT--CEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVL  262 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~--~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIl  262 (392)
                      |++-|+.....-.+...|++.|||..|+|.++.  |.+. ...+-.++.++.||+.|+.||..+   ..|||||...|+|
T Consensus       322 HpNLVqLLGVCT~EpPFYIiTEfM~yGNLLdYLRecnr~-ev~avvLlyMAtQIsSaMeYLEkk---nFIHRDLAARNCL  397 (1157)
T KOG4278|consen  322 HPNLVQLLGVCTHEPPFYIITEFMCYGNLLDYLRECNRS-EVPAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCL  397 (1157)
T ss_pred             CccHHHHhhhhccCCCeEEEEecccCccHHHHHHHhchh-hcchhHHHHHHHHHHHHHHHHHHh---hhhhhhhhhhhcc
Confidence            888888887755566789999999999887643  3322 223444677899999999999877   8999999999999


Q ss_pred             EcCCCCCeEeeeeceEEeCCCCcceeceeeecccccCchh-----HHHHHHHhcCCCcc--------------------e
Q 045577          263 LDAEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPE-----LLQAWKLWSEGDPM--------------------E  317 (392)
Q Consensus       263 l~~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~-----~~~~~diws~G~v~--------------------~  317 (392)
                      +.++..+||+|||+++++..+.-.......-...|.|++.     +.-+.|+|.+|.++                    +
T Consensus       398 VgEnhiVKvADFGLsRlMtgDTYTAHAGAKFPIKWTAPEsLAyNtFSiKSDVWAFGVLLWEIATYGMsPYPGidlSqVY~  477 (1157)
T KOG4278|consen  398 VGENHIVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYG  477 (1157)
T ss_pred             ccccceEEeeccchhhhhcCCceecccCccCcccccCcccccccccccchhhHHHHHHHHHHHhcCCCCCCCccHHHHHH
Confidence            9999999999999999986433221111222344555222     23478999999876                    2


Q ss_pred             eecccccCCCCCCHHHHHHHHHHHHhhcccCcCCCCCHHHHHHHHccC
Q 045577          318 IIDEQTKMKGPFSADELVKCIEVGLLCVQQRIEDWPTMSSVLTMLSNE  365 (392)
Q Consensus       318 ~ld~~~~~~~~~~~~~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~L~~~  365 (392)
                      ++..  .++-+-++.+..++.+++..||+-.|.+||++.|+-+.+|..
T Consensus       478 LLEk--gyRM~~PeGCPpkVYeLMraCW~WsPsDRPsFaeiHqafEtm  523 (1157)
T KOG4278|consen  478 LLEK--GYRMDGPEGCPPKVYELMRACWNWSPSDRPSFAEIHQAFETM  523 (1157)
T ss_pred             HHhc--cccccCCCCCCHHHHHHHHHHhcCCcccCccHHHHHHHHHHH
Confidence            3333  222223445566788899999999999999999999888753

>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins

Probab=99.68  E-value=1.5e-17  Score=152.69  Aligned_cols=163  Identities=15%  Similarity=0.091  Sum_probs=116.5

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEc
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLD  264 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~  264 (392)
                      +++.++.....+.....|++|||++++++.....+.. ...+..+..++.|++.||.|||+.   +++||||||+||+++
T Consensus        44 ~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~l~~~~~~~~~~ql~~~l~~lH~~---~i~H~dlkp~Nil~~  119 (237)
T cd05576          44 VPNMVCLHKYIVSEDSVFLVLQHAEGGKLWSHISKFL-NIPEECVKRWAAEMVVALDALHRE---GIVCRDLNPNNILLD  119 (237)
T ss_pred             CCceeehhhheecCCeEEEEEecCCCCCHHHHHHHhc-CCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHEEEc
Confidence            4566666666565678999999999999877654433 234455788999999999999998   899999999999999


Q ss_pred             CCCCCeEeeeeceEEeCCCCcceeceeeecccccCchhHH------HHHHHhcCCCcc-eeecccccCCC----------
Q 045577          265 AEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIIDEQTKMKG----------  327 (392)
Q Consensus       265 ~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld~~~~~~~----------  327 (392)
                      .++.++++|||.+..+...    .....++..|++ ||..      ...|+|+.|+++ +++.+...+..          
T Consensus       120 ~~~~~~l~df~~~~~~~~~----~~~~~~~~~y~a-PE~~~~~~~~~~~DvwslG~il~el~~g~~~~~~~~~~~~~~~~  194 (237)
T cd05576         120 DRGHIQLTYFSRWSEVEDS----CDGEAVENMYCA-PEVGGISEETEACDWWSLGAILFELLTGKTLVECHPSGINTHTT  194 (237)
T ss_pred             CCCCEEEecccchhccccc----cccCCcCccccC-CcccCCCCCCchhhHHHHHHHHHHHHHCcchhhcCchhcccccc
Confidence            9999999999987655321    112334567888 5533      367999999876 44433211100          


Q ss_pred             -CCCHHHHHHHHHHHHhhcccCcCCCCCHH
Q 045577          328 -PFSADELVKCIEVGLLCVQQRIEDWPTMS  356 (392)
Q Consensus       328 -~~~~~~~~~~~~i~~~Cl~~dp~~RPsm~  356 (392)
                       ..+......+.+++.+|++.||++||++.
T Consensus       195 ~~~~~~~~~~~~~li~~~l~~dp~~R~~~~  224 (237)
T cd05576         195 LNIPEWVSEEARSLLQQLLQFNPTERLGAG  224 (237)
T ss_pred             cCCcccCCHHHHHHHHHHccCCHHHhcCCC
Confidence             01111223566778899999999999973

Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha

>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3

Probab=99.68  E-value=5.7e-17  Score=152.04  Aligned_cols=170  Identities=21%  Similarity=0.262  Sum_probs=120.8

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEc
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLD  264 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~  264 (392)
                      |++.++.......+...|++|||++++++......  .......+..++.|++.|+.|||+.   +++|+||||.||+++
T Consensus        61 h~~iv~~~~~~~~~~~~~lv~e~~~~~~l~~~i~~--~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~dl~p~Ni~i~  135 (277)
T cd06641          61 SPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEP--GPLDETQIATILREILKGLDYLHSE---KKIHRDIKAANVLLS  135 (277)
T ss_pred             CCCEeEEEEEEEeCCeEEEEEEeCCCCcHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHccC---CeecCCCCHHhEEEC
Confidence            34444443333445678999999999888765432  2234555788999999999999998   899999999999999


Q ss_pred             CCCCCeEeeeeceEEeCCCCcceeceeeecccccCchhHH------HHHHHhcCCCcc-eeecccccCCCC---------
Q 045577          265 AEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIIDEQTKMKGP---------  328 (392)
Q Consensus       265 ~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld~~~~~~~~---------  328 (392)
                      .++.++|+|||++........ ......++..|++ ||..      ...|+|+.|+++ +++.+..++...         
T Consensus       136 ~~~~~~l~dfg~~~~~~~~~~-~~~~~~~~~~y~~-PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~  213 (277)
T cd06641         136 EHGEVKLADFGVAGQLTDTQI-KRNTFVGTPFWMA-PEVIKQSAYDSKADIWSLGITAIELAKGEPPHSELHPMKVLFLI  213 (277)
T ss_pred             CCCCEEEeecccceecccchh-hhccccCCccccC-hhhhccCCCCchhhHHHHHHHHHHHHcCCCCCCccchHHHHHHH
Confidence            999999999999877542211 1122457788888 6654      357999999876 444443222111         


Q ss_pred             -------CCHHHHHHHHHHHHhhcccCcCCCCCHHHHHHH
Q 045577          329 -------FSADELVKCIEVGLLCVQQRIEDWPTMSSVLTM  361 (392)
Q Consensus       329 -------~~~~~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~  361 (392)
                             ........+.+++.+|++.+|++||++.++++.
T Consensus       214 ~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~~  253 (277)
T cd06641         214 PKNNPPTLEGNYSKPLKEFVEACLNKEPSFRPTAKELLKH  253 (277)
T ss_pred             hcCCCCCCCcccCHHHHHHHHHHccCChhhCcCHHHHHhC
Confidence                   111122356678889999999999999999984

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int

>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]

Probab=99.68  E-value=1.7e-17  Score=140.55  Aligned_cols=164  Identities=21%  Similarity=0.312  Sum_probs=117.1

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEc
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLD  264 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~  264 (392)
                      |.+.||...+--++...-+|+|||+-....++..-.. -.....+..++.|+.+||.++|++   .++|||+||+|.+++
T Consensus        60 hknivrl~dvlhsdkkltlvfe~cdqdlkkyfdslng-~~d~~~~rsfmlqllrgl~fchsh---nvlhrdlkpqnllin  135 (292)
T KOG0662|consen   60 HKNIVRLHDVLHSDKKLTLVFEFCDQDLKKYFDSLNG-DLDPEIVRSFMLQLLRGLGFCHSH---NVLHRDLKPQNLLIN  135 (292)
T ss_pred             hcceeehhhhhccCceeEEeHHHhhHHHHHHHHhcCC-cCCHHHHHHHHHHHHhhhhhhhhh---hhhhccCCcceEEec
Confidence            8899999888777888999999997432222211111 113334678899999999999998   899999999999999


Q ss_pred             CCCCCeEeeeeceEEeCCCCcceeceeeecccccCchh-------HHHHHHHhcCCCcc-eeec-ccccCCCCCCHHHHH
Q 045577          265 AEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPE-------LLQAWKLWSEGDPM-EIID-EQTKMKGPFSADELV  335 (392)
Q Consensus       265 ~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~-------~~~~~diws~G~v~-~~ld-~~~~~~~~~~~~~~~  335 (392)
                      .+|+.|++|||+++.++-....... .+-|..|.+ |.       +....|+|+.||++ |+.+ +++.+++..-.+++.
T Consensus       136 ~ngelkladfglarafgipvrcysa-evvtlwyrp-pdvlfgakly~tsidmwsagcifaelanagrplfpg~dvddqlk  213 (292)
T KOG0662|consen  136 RNGELKLADFGLARAFGIPVRCYSA-EVVTLWYRP-PDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLK  213 (292)
T ss_pred             cCCcEEecccchhhhcCCceEeeec-eeeeeeccC-cceeeeeehhccchHhhhcchHHHHHhhcCCCCCCCCcHHHHHH
Confidence            9999999999999988743333332 244666666 43       33577999999988 4444 344566666667777


Q ss_pred             HHHHHHHhhcccCcCCCCCHHH
Q 045577          336 KCIEVGLLCVQQRIEDWPTMSS  357 (392)
Q Consensus       336 ~~~~i~~~Cl~~dp~~RPsm~e  357 (392)
                      ++..+   .-.+..+++|+|.+
T Consensus       214 rif~~---lg~p~ed~wps~t~  232 (292)
T KOG0662|consen  214 RIFRL---LGTPTEDQWPSMTK  232 (292)
T ss_pred             HHHHH---hCCCccccCCcccc
Confidence            77663   33456667777754

>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2

Probab=99.68  E-value=3.6e-17  Score=152.22  Aligned_cols=155  Identities=19%  Similarity=0.258  Sum_probs=110.1

Q ss_pred             CeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEcCCCCCeEeeeeceEE
Q 045577          200 EVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEINPNISDFGPARI  279 (392)
Q Consensus       200 ~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~~~~~~kl~DFGla~~  279 (392)
                      ..+++|||++++++.....+.. ........+++.|++.||.|||+.   +++|+||||+||+++.++.+||+|||+++.
T Consensus        80 ~~~~v~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~~l~Dfg~~~~  155 (265)
T cd06652          80 TLSIFMEHMPGGSIKDQLKSYG-ALTENVTRKYTRQILEGVSYLHSN---MIVHRDIKGANILRDSVGNVKLGDFGASKR  155 (265)
T ss_pred             eEEEEEEecCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEecCCCCEEECcCccccc
Confidence            4679999999998876544332 224445788999999999999998   899999999999999999999999999876


Q ss_pred             eCCC--CcceeceeeecccccCchhHH------HHHHHhcCCCcc-eeecccccCCCC-----------------CCHHH
Q 045577          280 FGDQ--TEEVTGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIIDEQTKMKGP-----------------FSADE  333 (392)
Q Consensus       280 ~~~~--~~~~~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld~~~~~~~~-----------------~~~~~  333 (392)
                      ....  .........|+..|+| ||..      ...|+|++|+++ +++.+...+...                 .+...
T Consensus       156 ~~~~~~~~~~~~~~~~~~~y~a-PE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (265)
T cd06652         156 LQTICLSGTGMKSVTGTPYWMS-PEVISGEGYGRKADIWSVGCTVVEMLTEKPPWAEFEAMAAIFKIATQPTNPVLPPHV  234 (265)
T ss_pred             cccccccccccccCCCCccccC-hhhhcCCCCCcchhHHHHHHHHHHHhhCCCCCCccchHHHHHHHhcCCCCCCCchhh
Confidence            5311  1111222457888999 6654      357999999876 444443332211                 11222


Q ss_pred             HHHHHHHHHhhcccCcCCCCCHHHHHH
Q 045577          334 LVKCIEVGLLCVQQRIEDWPTMSSVLT  360 (392)
Q Consensus       334 ~~~~~~i~~~Cl~~dp~~RPsm~eVv~  360 (392)
                      ...+..++..|+. +|++||++++|++
T Consensus       235 ~~~~~~~i~~~l~-~p~~Rp~~~~il~  260 (265)
T cd06652         235 SDHCRDFLKRIFV-EAKLRPSADELLR  260 (265)
T ss_pred             CHHHHHHHHHHhc-ChhhCCCHHHHhc
Confidence            2345566667774 8999999988875

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re

>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]

Probab=99.68  E-value=3.4e-17  Score=169.86  Aligned_cols=176  Identities=23%  Similarity=0.242  Sum_probs=124.6

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhh---------------ccccchhhhhHHHHHHHhhhhcCcCCCC
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFE---------------CSKYSSYVTNILYGIARVILYLPEDSRL  249 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~---------------~~~~~~~~~~i~~~ia~gL~yLH~~~~~  249 (392)
                      |++-+-.....-.++..++++||++.|++..+..+.+               -......++.++.|||.|++||++.   
T Consensus       361 H~niv~llG~~t~~~~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~~---  437 (609)
T KOG0200|consen  361 HPNIVNLLGACTQDGPLYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLASV---  437 (609)
T ss_pred             CcchhhheeeeccCCceEEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhhC---
Confidence            4444433332222578999999999999988655444               1133445799999999999999988   


Q ss_pred             ceeecccccceeEEcCCCCCeEeeeeceEEeCCCCcceeceeee--cccccCchhHH------HHHHHhcCCCcc-eeec
Q 045577          250 EIIHRDHKTSNVLLDAEINPNISDFGPARIFGDQTEEVTGRVIG--TQTLKTVPELL------QAWKLWSEGDPM-EIID  320 (392)
Q Consensus       250 ~iiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~~~~~~~~~g--t~~y~a~~~~~------~~~diws~G~v~-~~ld  320 (392)
                      +++||||..+|||+..+..+||+|||+|+..............|  ...||| ||-+      ...|+||.|+++ |++.
T Consensus       438 ~~vHRDLAaRNVLi~~~~~~kIaDFGlar~~~~~~~y~~~~~~~~LP~kWmA-pEsl~~~~ft~kSDVWSfGI~L~Eifs  516 (609)
T KOG0200|consen  438 PCVHRDLAARNVLITKNKVIKIADFGLARDHYNKDYYRTKSSAGTLPVKWMA-PESLFDRVFTSKSDVWSFGILLWEIFT  516 (609)
T ss_pred             CccchhhhhhhEEecCCCEEEEccccceeccCCCCceEecCCCCccceeecC-HHHhccCcccccchhhHHHHHHHHHhh
Confidence            89999999999999999999999999999654332222221222  345899 5544      367999999876 3333


Q ss_pred             cccc-CCC-----------------CCCHHHHHHHHHHHHhhcccCcCCCCCHHHHHHHHcc
Q 045577          321 EQTK-MKG-----------------PFSADELVKCIEVGLLCVQQRIEDWPTMSSVLTMLSN  364 (392)
Q Consensus       321 ~~~~-~~~-----------------~~~~~~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~L~~  364 (392)
                      -+.. .++                 +.+..+..++.+++..||+.+|++||++.++++.|+.
T Consensus       517 LG~~PYp~~~~~~~l~~~l~~G~r~~~P~~c~~eiY~iM~~CW~~~p~~RP~F~~~~~~~~~  578 (609)
T KOG0200|consen  517 LGGTPYPGIPPTEELLEFLKEGNRMEQPEHCSDEIYDLMKSCWNADPEDRPTFSECVEFFEK  578 (609)
T ss_pred             CCCCCCCCCCcHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHHHH
Confidence            2111 111                 1122234466788999999999999999999999987

>PTZ00024 cyclin-dependent protein kinase; Provisional

Probab=99.68  E-value=5.8e-17  Score=156.36  Aligned_cols=171  Identities=20%  Similarity=0.183  Sum_probs=119.8

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEc
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLD  264 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~  264 (392)
                      |++.++.....+.++..+++|||+.+ ++....... .......+..++.|++.||.|||+.   +++|+||||+||+++
T Consensus        79 h~~iv~~~~~~~~~~~~~lv~e~~~~-~l~~~l~~~-~~~~~~~~~~~~~ql~~aL~~LH~~---~i~H~dl~~~nill~  153 (335)
T PTZ00024         79 HENIMGLVDVYVEGDFINLVMDIMAS-DLKKVVDRK-IRLTESQVKCILLQILNGLNVLHKW---YFMHRDLSPANIFIN  153 (335)
T ss_pred             CcceeeeeEEEecCCcEEEEEecccc-CHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhC---CeecccccHHHeEEC
Confidence            55555555555556778999999984 554433322 2234455788999999999999998   899999999999999


Q ss_pred             CCCCCeEeeeeceEEeCCCC-------------cceeceeeecccccCchhHH-------HHHHHhcCCCcc-eeecccc
Q 045577          265 AEINPNISDFGPARIFGDQT-------------EEVTGRVIGTQTLKTVPELL-------QAWKLWSEGDPM-EIIDEQT  323 (392)
Q Consensus       265 ~~~~~kl~DFGla~~~~~~~-------------~~~~~~~~gt~~y~a~~~~~-------~~~diws~G~v~-~~ld~~~  323 (392)
                      .++.+||+|||++.......             ........++..|++ ||..       ...|+|+.|+++ +++.+.+
T Consensus       154 ~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~a-PE~~~~~~~~~~~~Dv~slG~~l~el~tg~~  232 (335)
T PTZ00024        154 SKGICKIADFGLARRYGYPPYSDTLSKDETMQRREEMTSKVVTLWYRA-PELLMGAEKYHFAVDMWSVGCIFAELLTGKP  232 (335)
T ss_pred             CCCCEEECCccceeecccccccccccccccccccccccccccccCCCC-ChhcccCCCCCcHHHHHHHHHHHHHHHhCCC
Confidence            99999999999998654110             011112345778888 5543       367999999876 4555433


Q ss_pred             cCCCCCCHH-------------------------------------------HHHHHHHHHHhhcccCcCCCCCHHHHHH
Q 045577          324 KMKGPFSAD-------------------------------------------ELVKCIEVGLLCVQQRIEDWPTMSSVLT  360 (392)
Q Consensus       324 ~~~~~~~~~-------------------------------------------~~~~~~~i~~~Cl~~dp~~RPsm~eVv~  360 (392)
                      .+....+.+                                           ....+.+++..|++.+|++||++.+++.
T Consensus       233 p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~  312 (335)
T PTZ00024        233 LFPGENEIDQLGRIFELLGTPNEDNWPQAKKLPLYTEFTPRKPKDLKTIFPNASDDAIDLLQSLLKLNPLERISAKEALK  312 (335)
T ss_pred             CCCCCCHHHHHHHHHHHhCCCchhhCcchhhcccccccCcCCcccHHHhCcCCChHHHHHHHHHcCCCchhccCHHHHhc
Confidence            322211110                                           1234667888999999999999999987


Q ss_pred             H
Q 045577          361 M  361 (392)
Q Consensus       361 ~  361 (392)
                      .
T Consensus       313 ~  313 (335)
T PTZ00024        313 H  313 (335)
T ss_pred             C
Confidence            5

>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]

Probab=99.68  E-value=7.7e-17  Score=163.98  Aligned_cols=160  Identities=22%  Similarity=0.294  Sum_probs=124.6

Q ss_pred             CCCCCeeEEecCccCCCcChhhhhhhccc-cchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEcCCCCCeEeee
Q 045577          196 CGDGEVFLMFEGIKLPDKSEFTCEFECSK-YSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEINPNISDF  274 (392)
Q Consensus       196 C~~~~~~lv~e~~~~~~l~~~~~~~~~~~-~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~~~~~~kl~DF  274 (392)
                      |.++.+++|||||.+|+..+......... .+.++.-|+.++++||.+||.+   .++|||+|-.|||++.++.+|+.||
T Consensus        91 ~~~DqLWLVMEfC~gGSVTDLVKn~~g~rl~E~~IaYI~re~lrgl~HLH~n---kviHRDikG~NiLLT~e~~VKLvDF  167 (953)
T KOG0587|consen   91 GNGDQLWLVMEFCGGGSVTDLVKNTKGNRLKEEWIAYILREILRGLAHLHNN---KVIHRDIKGQNVLLTENAEVKLVDF  167 (953)
T ss_pred             CCCCeEEEEeeccCCccHHHHHhhhcccchhhHHHHHHHHHHHHHHHHHhhc---ceeeecccCceEEEeccCcEEEeee
Confidence            66788999999999999877554433222 4455677899999999999999   8999999999999999999999999


Q ss_pred             eceEEeCCCCcceeceeeecccccCchhHH-----------HHHHHhcCCCcc-eeecccccCCCC--------------
Q 045577          275 GPARIFGDQTEEVTGRVIGTQTLKTVPELL-----------QAWKLWSEGDPM-EIIDEQTKMKGP--------------  328 (392)
Q Consensus       275 Gla~~~~~~~~~~~~~~~gt~~y~a~~~~~-----------~~~diws~G~v~-~~ld~~~~~~~~--------------  328 (392)
                      |++..+. .+.....+..||+.||| ||+.           ..+|+|++|... |+-|+.+++...              
T Consensus       168 GvSaQld-sT~grRnT~iGtP~WMA-PEViac~e~~d~tyd~R~D~WsLGITaIEladG~PPl~DmHPmraLF~IpRNPP  245 (953)
T KOG0587|consen  168 GVSAQLD-STVGRRNTFIGTPYWMA-PEVIACDESPDATYDYRSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIPRNPP  245 (953)
T ss_pred             eeeeeee-cccccccCcCCCccccc-ceeeecccCCCCCcccccchhhccceeehhcCCCCCccCcchhhhhccCCCCCC
Confidence            9998764 23334455789999999 5543           367999999864 666665443221              


Q ss_pred             ----CCHHHHHHHHHHHHhhcccCcCCCCCHHHHHH
Q 045577          329 ----FSADELVKCIEVGLLCVQQRIEDWPTMSSVLT  360 (392)
Q Consensus       329 ----~~~~~~~~~~~i~~~Cl~~dp~~RPsm~eVv~  360 (392)
                          .+..-.+++.+.+..|+..|-++||++.++++
T Consensus       246 PkLkrp~kWs~~FndFIs~cL~Kd~e~RP~~~~ll~  281 (953)
T KOG0587|consen  246 PKLKRPKKWSKKFNDFISTCLVKDYEQRPSTEELLK  281 (953)
T ss_pred             ccccchhhHHHHHHHHHHHHHhhccccCcchhhhcc
Confidence                23345668888999999999999999887764

>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

Probab=99.68  E-value=3.3e-17  Score=154.32  Aligned_cols=172  Identities=17%  Similarity=0.238  Sum_probs=121.5

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEc
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLD  264 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~  264 (392)
                      |+++++.......++..|+++||++++++........-......+..++.|++.||.|||+.   +++|+|++|+||+++
T Consensus        74 ~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~lH~~---gi~H~dl~p~ni~i~  150 (286)
T cd06614          74 HPNIVDYYDSYLVGDELWVVMEYMDGGSLTDIITQNFVRMNEPQIAYVCREVLQGLEYLHSQ---NVIHRDIKSDNILLS  150 (286)
T ss_pred             CCCeeEEEEEEEECCEEEEEEeccCCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCChhhEEEc
Confidence            44444444433345678999999999998876554431334455788999999999999997   899999999999999


Q ss_pred             CCCCCeEeeeeceEEeCCCCcceeceeeecccccCchhHH------HHHHHhcCCCcc-eeecccccCCCCCCH------
Q 045577          265 AEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIIDEQTKMKGPFSA------  331 (392)
Q Consensus       265 ~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld~~~~~~~~~~~------  331 (392)
                      .++.+||+|||++........ ......++..|++ ||..      ...|+|+.|+++ +++.+...+....+.      
T Consensus       151 ~~~~~~l~d~~~~~~~~~~~~-~~~~~~~~~~y~~-PE~~~~~~~~~~~Dv~slGvil~~l~~g~~p~~~~~~~~~~~~~  228 (286)
T cd06614         151 KDGSVKLADFGFAAQLTKEKS-KRNSVVGTPYWMA-PEVIKRKDYGPKVDIWSLGIMCIEMAEGEPPYLREPPLRALFLI  228 (286)
T ss_pred             CCCCEEECccchhhhhccchh-hhccccCCcccCC-HhHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCHHHHHHHH
Confidence            999999999998765432111 1122457788988 6654      367999999876 444442222111100      


Q ss_pred             ------------HHHHHHHHHHHhhcccCcCCCCCHHHHHHH
Q 045577          332 ------------DELVKCIEVGLLCVQQRIEDWPTMSSVLTM  361 (392)
Q Consensus       332 ------------~~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~  361 (392)
                                  .....+.+++.+|++.+|.+||++.+|++.
T Consensus       229 ~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~  270 (286)
T cd06614         229 TTKGIPPLKNPEKWSPEFKDFLNKCLVKDPEKRPSAEELLQH  270 (286)
T ss_pred             HhcCCCCCcchhhCCHHHHHHHHHHhccChhhCcCHHHHhhC
Confidence                        012346678889999999999999999864

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou

>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

Probab=99.68  E-value=5.6e-17  Score=153.64  Aligned_cols=170  Identities=15%  Similarity=0.235  Sum_probs=120.5

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEc
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLD  264 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~  264 (392)
                      |++.++.......++..|+++||++++++.....+.  ......+..++.|++.||.|||+.   +++|+||||+||+++
T Consensus        75 hp~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~--~l~~~~~~~i~~~l~~al~~LH~~---gi~H~dL~p~Nili~  149 (293)
T cd06647          75 HPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTET--CMDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLG  149 (293)
T ss_pred             CCCeeehhheeeeCCcEEEEEecCCCCcHHHHHhhc--CCCHHHHHHHHHHHHHHHHHHHhC---CEeeccCCHHHEEEc
Confidence            444444433333346789999999999987654332  234445788999999999999998   899999999999999


Q ss_pred             CCCCCeEeeeeceEEeCCCCcceeceeeecccccCchhHH------HHHHHhcCCCcc-eeecccccCCCCC--------
Q 045577          265 AEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIIDEQTKMKGPF--------  329 (392)
Q Consensus       265 ~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld~~~~~~~~~--------  329 (392)
                      .++.+||+|||++........ ......+++.|++ ||..      ...|+|+.|+++ +++.+..++....        
T Consensus       150 ~~~~~kL~dfg~~~~~~~~~~-~~~~~~~~~~y~~-PE~~~~~~~~~~~Dv~slG~ll~~ll~g~~pf~~~~~~~~~~~~  227 (293)
T cd06647         150 MDGSVKLTDFGFCAQITPEQS-KRSTMVGTPYWMA-PEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLI  227 (293)
T ss_pred             CCCCEEEccCcceeccccccc-ccccccCChhhcC-chhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChhhheeeh
Confidence            999999999999876542221 1222467888998 6654      357999999765 4443332221110        


Q ss_pred             ----------CHHHHHHHHHHHHhhcccCcCCCCCHHHHHHH
Q 045577          330 ----------SADELVKCIEVGLLCVQQRIEDWPTMSSVLTM  361 (392)
Q Consensus       330 ----------~~~~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~  361 (392)
                                .......+.+++..|++.+|++||++.++++.
T Consensus       228 ~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~h  269 (293)
T cd06647         228 ATNGTPELQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQH  269 (293)
T ss_pred             hcCCCCCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence                      01112346677889999999999999999976

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi

>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1

Probab=99.68  E-value=8.3e-17  Score=155.22  Aligned_cols=157  Identities=20%  Similarity=0.318  Sum_probs=111.1

Q ss_pred             CCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEcCCCCCeEeeeeceE
Q 045577          199 GEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEINPNISDFGPAR  278 (392)
Q Consensus       199 ~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~~~~~~kl~DFGla~  278 (392)
                      ...|+++|++.. ++........ ...+..+..++.|++.||.|||+.   +++||||||+||+++.++.+||+|||+++
T Consensus        79 ~~~~~~~e~~~~-~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH~~---givH~dlkp~Nili~~~~~~kl~Dfg~a~  153 (332)
T cd07857          79 NELYLYEELMEA-DLHQIIRSGQ-PLTDAHFQSFIYQILCGLKYIHSA---NVLHRDLKPGNLLVNADCELKICDFGLAR  153 (332)
T ss_pred             CcEEEEEecccC-CHHHHHhcCC-CCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHeEEcCCCCEEeCcCCCce
Confidence            457899999874 5544433222 224455788999999999999998   89999999999999999999999999998


Q ss_pred             EeCCCC---cceeceeeecccccCchhHH-------HHHHHhcCCCcc-eeecccccCCCCCC---------------H-
Q 045577          279 IFGDQT---EEVTGRVIGTQTLKTVPELL-------QAWKLWSEGDPM-EIIDEQTKMKGPFS---------------A-  331 (392)
Q Consensus       279 ~~~~~~---~~~~~~~~gt~~y~a~~~~~-------~~~diws~G~v~-~~ld~~~~~~~~~~---------------~-  331 (392)
                      ......   ........|+..|+| ||..       ...|+|+.|+++ +++.+.+.+.....               . 
T Consensus       154 ~~~~~~~~~~~~~~~~~g~~~y~a-PE~~~~~~~~~~~~Di~slGv~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~  232 (332)
T cd07857         154 GFSENPGENAGFMTEYVATRWYRA-PEIMLSFQSYTKAIDVWSVGCILAELLGRKPVFKGKDYVDQLNQILQVLGTPDEE  232 (332)
T ss_pred             ecccccccccccccCcccCccccC-cHHHhCCCCCCcHHHHHHHHHHHHHHHhCCcCCCCCCHHHHHHHHHHHhCCCCHH
Confidence            754211   111233568889999 6643       257999999876 44444332221100               0 


Q ss_pred             ------------------------------HHHHHHHHHHHhhcccCcCCCCCHHHHHHH
Q 045577          332 ------------------------------DELVKCIEVGLLCVQQRIEDWPTMSSVLTM  361 (392)
Q Consensus       332 ------------------------------~~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~  361 (392)
                                                    .....+.+++.+|++.+|++||++.++++.
T Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~ll~~  292 (332)
T cd07857         233 TLSRIGSPKAQNYIRSLPNIPKKPFESIFPNANPLALDLLEKLLAFDPTKRISVEEALEH  292 (332)
T ss_pred             HHHhhhhhhHHHHHHhccccCCcchHhhCCCCCHHHHHHHHHHccCCcccCCCHHHHhcC
Confidence                                          011346678889999999999999998743

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co

>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4

Probab=99.68  E-value=3.7e-17  Score=154.02  Aligned_cols=171  Identities=20%  Similarity=0.275  Sum_probs=114.9

Q ss_pred             CCccccccCcCCCCCeeEEecCccCCCcC--hhh-hhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeE
Q 045577          186 GGCKRNWEADCGDGEVFLMFEGIKLPDKS--EFT-CEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVL  262 (392)
Q Consensus       186 ~GCvR~~~l~C~~~~~~lv~e~~~~~~l~--~~~-~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIl  262 (392)
                      ++.++........+..+++|||+......  ... ...........+.+++.+++.||.|||+..  +++||||||+||+
T Consensus        63 ~~iv~~~~~~~~~~~~~~~~e~~~~~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~--~i~H~dlkp~Nil  140 (288)
T cd06616          63 PYIVKFYGALFREGDCWICMELMDISLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKEEL--KIIHRDVKPSNIL  140 (288)
T ss_pred             CCEeeeeeEEecCCcEEEEEecccCCHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhcC--CeeccCCCHHHEE
Confidence            33344333333356789999998753211  111 111233345557889999999999999643  7999999999999


Q ss_pred             EcCCCCCeEeeeeceEEeCCCCcceeceeeecccccCchhHH---------HHHHHhcCCCcc-eeecccccCCCC----
Q 045577          263 LDAEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELL---------QAWKLWSEGDPM-EIIDEQTKMKGP----  328 (392)
Q Consensus       263 l~~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~---------~~~diws~G~v~-~~ld~~~~~~~~----  328 (392)
                      ++.++.+||+|||+++......  ......|+..|++ ||..         ...|+|+.|+++ +++.++.++...    
T Consensus       141 ~~~~~~~kl~dfg~~~~~~~~~--~~~~~~~~~~y~a-PE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~  217 (288)
T cd06616         141 LDRNGNIKLCDFGISGQLVDSI--AKTRDAGCRPYMA-PERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYPKWNSVF  217 (288)
T ss_pred             EccCCcEEEeecchhHHhccCC--ccccccCccCccC-HHHhccccccCCcchhhhhHHHHHHHHHHhCCCCchhcchHH
Confidence            9999999999999987543221  1122357888999 6543         357999999875 444443332111    


Q ss_pred             -----------------CCHHHHHHHHHHHHhhcccCcCCCCCHHHHHHH
Q 045577          329 -----------------FSADELVKCIEVGLLCVQQRIEDWPTMSSVLTM  361 (392)
Q Consensus       329 -----------------~~~~~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~  361 (392)
                                       ........+.+++.+|++.+|++||++.+|++.
T Consensus       218 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~i~~~  267 (288)
T cd06616         218 DQLTQVVKGDPPILSNSEEREFSPSFVNFINLCLIKDESKRPKYKELLEH  267 (288)
T ss_pred             HHHhhhcCCCCCcCCCcCCCccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence                             001123356778889999999999999998864

Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates

>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

Probab=99.67  E-value=3.5e-17  Score=153.49  Aligned_cols=169  Identities=18%  Similarity=0.075  Sum_probs=118.8

Q ss_pred             CCccccccCcCCCCCeeEEecCccCCCcChhhhhhhc-cccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEc
Q 045577          186 GGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFEC-SKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLD  264 (392)
Q Consensus       186 ~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~-~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~  264 (392)
                      ++.++........+..|++|||++++++.....+... ......+..++.|++.||.|||+.   +++|+||+|.||+++
T Consensus        53 ~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~---~i~H~di~p~Nil~~  129 (277)
T cd05577          53 RFIVSLAYAFETKDDLCLVMTLMNGGDLKYHIYNVGEPGFPEARAIFYAAQIICGLEHLHQR---RIVYRDLKPENVLLD  129 (277)
T ss_pred             CCEeeeeeEEecCCeEEEEEecCCCCcHHHHHHHcCcCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEC
Confidence            3333333333345678999999999999876655443 235555788999999999999998   899999999999999


Q ss_pred             CCCCCeEeeeeceEEeCCCCcceeceeeecccccCchhHH------HHHHHhcCCCcc-eeecccccCCCCCC---H---
Q 045577          265 AEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIIDEQTKMKGPFS---A---  331 (392)
Q Consensus       265 ~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld~~~~~~~~~~---~---  331 (392)
                      .++.+||+|||++......  .......++..|++ ||..      ...|+|+.|+++ +++.+..++.....   .   
T Consensus       130 ~~~~~~l~dfg~~~~~~~~--~~~~~~~~~~~y~~-PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~  206 (277)
T cd05577         130 DHGNVRISDLGLAVELKGG--KKIKGRAGTPGYMA-PEVLQGEVYDFSVDWFALGCTLYEMIAGRSPFRQRKEKVEKEEL  206 (277)
T ss_pred             CCCCEEEccCcchhhhccC--CccccccCCCCcCC-HHHhcCCCCCchhhhHHHHHHHHHHhhCCCCCCCCcccccHHHH
Confidence            9999999999998765321  11222456778888 6654      367999999875 55555333322111   1   


Q ss_pred             -------------HHHHHHHHHHHhhcccCcCCCC-----CHHHHHH
Q 045577          332 -------------DELVKCIEVGLLCVQQRIEDWP-----TMSSVLT  360 (392)
Q Consensus       332 -------------~~~~~~~~i~~~Cl~~dp~~RP-----sm~eVv~  360 (392)
                                   .....+.+++..|++.+|++||     +..++++
T Consensus       207 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~  253 (277)
T cd05577         207 KRRTLEMAVEYPDKFSPEAKDLCEALLQKDPEKRLGCRGGSADEVRE  253 (277)
T ss_pred             HhccccccccCCccCCHHHHHHHHHHccCChhHccCCCcccHHHHHh
Confidence                         1123456788899999999999     5555553

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of

>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

Probab=99.67  E-value=7.7e-17  Score=148.40  Aligned_cols=171  Identities=19%  Similarity=0.275  Sum_probs=122.5

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhh---ccccchhhhhHHHHHHHhhhhcCcCCCCceeeccccccee
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFE---CSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNV  261 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~---~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NI  261 (392)
                      +++.++.......++..++++|+++++++.....+..   .......+..++.+++.||.|||+.   +++|+||+|+||
T Consensus        58 ~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~---~~~H~dl~~~ni  134 (258)
T cd08215          58 HPNIIKYYESFEEKGKLCIVMEYADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHSR---KILHRDIKPQNI  134 (258)
T ss_pred             CCChhheEEEEecCCEEEEEEEecCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHHhC---CEecccCChHHe
Confidence            3333333333333467899999999998877555432   3335556889999999999999998   899999999999


Q ss_pred             EEcCCCCCeEeeeeceEEeCCCCcceeceeeecccccCchhHH------HHHHHhcCCCcc-eeecccccCCCCC-----
Q 045577          262 LLDAEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIIDEQTKMKGPF-----  329 (392)
Q Consensus       262 ll~~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld~~~~~~~~~-----  329 (392)
                      +++.++.+||+|||++....... .......|++.|++ ||..      ...|+|+.|.++ +++.+...+....     
T Consensus       135 l~~~~~~~~l~d~~~~~~~~~~~-~~~~~~~~~~~y~~-pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~  212 (258)
T cd08215         135 FLTSNGLVKLGDFGISKVLSSTV-DLAKTVVGTPYYLS-PELCQNKPYNYKSDIWSLGCVLYELCTLKHPFEGENLLELA  212 (258)
T ss_pred             EEcCCCcEEECCccceeecccCc-ceecceeeeecccC-hhHhccCCCCccccHHHHHHHHHHHHcCCCCCCCCcHHHHH
Confidence            99999999999999998765322 22233567888998 6643      367999999765 4444432222111     


Q ss_pred             -----------CHHHHHHHHHHHHhhcccCcCCCCCHHHHHH
Q 045577          330 -----------SADELVKCIEVGLLCVQQRIEDWPTMSSVLT  360 (392)
Q Consensus       330 -----------~~~~~~~~~~i~~~Cl~~dp~~RPsm~eVv~  360 (392)
                                 +......+.+++.+|++.+|++||++.++++
T Consensus       213 ~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~  254 (258)
T cd08215         213 LKILKGQYPPIPSQYSSELRNLVSSLLQKDPEERPSIAQILQ  254 (258)
T ss_pred             HHHhcCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence                       1112235667888999999999999999875

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They

>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.67  E-value=1.7e-16  Score=150.96  Aligned_cols=178  Identities=16%  Similarity=0.137  Sum_probs=131.3

Q ss_pred             CCCccccccCcCC----CCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCc-----CCCCceeecc
Q 045577          185 SGGCKRNWEADCG----DGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPE-----DSRLEIIHRD  255 (392)
Q Consensus       185 s~GCvR~~~l~C~----~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~-----~~~~~iiHrD  255 (392)
                      |.+...-....-.    -..+++|.+|-+.|+|.++.++..  .....+++++..+|.||++||-     +.++.|.|||
T Consensus       264 HENILgFIaaD~~~~gs~TQLwLvTdYHe~GSL~DyL~r~t--v~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRD  341 (513)
T KOG2052|consen  264 HENILGFIAADNKDNGSWTQLWLVTDYHEHGSLYDYLNRNT--VTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRD  341 (513)
T ss_pred             cchhhhhhhccccCCCceEEEEEeeecccCCcHHHHHhhcc--CCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccc
Confidence            6666655433211    146899999999999999887732  3444589999999999999995     3578999999


Q ss_pred             cccceeEEcCCCCCeEeeeeceEEeCCC---CcceeceeeecccccCchhHH------------HHHHHhcCCCcc----
Q 045577          256 HKTSNVLLDAEINPNISDFGPARIFGDQ---TEEVTGRVIGTQTLKTVPELL------------QAWKLWSEGDPM----  316 (392)
Q Consensus       256 lKp~NIll~~~~~~kl~DFGla~~~~~~---~~~~~~~~~gt~~y~a~~~~~------------~~~diws~G~v~----  316 (392)
                      ||+.|||+.+++.+-|+|+|||......   -.......+||-.||| ||++            ...|+|++|-++    
T Consensus       342 lKSKNILVKkn~~C~IADLGLAv~h~~~t~~idi~~N~rVGTKRYMA-PEvLdetin~~~Fesyk~ADIYafgLVlWEia  420 (513)
T KOG2052|consen  342 LKSKNILVKKNGTCCIADLGLAVRHDSDTDTIDIPPNPRVGTKRYMA-PEVLDETINMKHFESYKRADIYAFGLVLWEIA  420 (513)
T ss_pred             cccccEEEccCCcEEEeeceeeEEecccCCcccCCCCCccceeeccC-hHHhhhhcChhhhhhhhHHHHHHHHHHHHHHH
Confidence            9999999999999999999999876532   2233445789999999 7765            245888887554    


Q ss_pred             -----------------eeecccc----------------cCCCC-CCHHHHHHHHHHHHhhcccCcCCCCCHHHHHHHH
Q 045577          317 -----------------EIIDEQT----------------KMKGP-FSADELVKCIEVGLLCVQQRIEDWPTMSSVLTML  362 (392)
Q Consensus       317 -----------------~~ld~~~----------------~~~~~-~~~~~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~L  362 (392)
                                       +++...|                .++.. .+.+.+..+.+++..||..+|..|-|+-.|-+.|
T Consensus       421 rRc~~ggi~eey~~Pyyd~Vp~DPs~eeMrkVVCv~~~RP~ipnrW~s~~~l~~m~klMkeCW~~Np~aRltALriKKtl  500 (513)
T KOG2052|consen  421 RRCESGGIVEEYQLPYYDVVPSDPSFEEMRKVVCVQKLRPNIPNRWKSDPALRVMAKLMKECWYANPAARLTALRIKKTL  500 (513)
T ss_pred             HHhhcCCEehhhcCCcccCCCCCCCHHHHhcceeecccCCCCCcccccCHHHHHHHHHHHHhhcCCchhhhHHHHHHHHH
Confidence                             1111111                11111 1235566788899999999999999998888888


Q ss_pred             ccC
Q 045577          363 SNE  365 (392)
Q Consensus       363 ~~~  365 (392)
                      .+.
T Consensus       501 ~~l  503 (513)
T KOG2052|consen  501 AKL  503 (513)
T ss_pred             HHH
Confidence            766

>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

Probab=99.67  E-value=7.3e-17  Score=152.91  Aligned_cols=170  Identities=15%  Similarity=0.197  Sum_probs=120.6

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEc
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLD  264 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~  264 (392)
                      |++.++.......+...|++|||++++++.......  ......+..++.|++.||.|||+.   +++|+||+|+||+++
T Consensus        76 h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~--~~~~~~~~~~~~ql~~~l~~lH~~---givH~dl~p~Nilv~  150 (292)
T cd06657          76 HENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHT--RMNEEQIAAVCLAVLKALSVLHAQ---GVIHRDIKSDSILLT  150 (292)
T ss_pred             CcchhheeeEEEeCCEEEEEEecCCCCcHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEC
Confidence            444444444444456789999999998886643222  123444678899999999999998   899999999999999


Q ss_pred             CCCCCeEeeeeceEEeCCCCcceeceeeecccccCchhHH------HHHHHhcCCCcc-eeecccccCCCCCCH------
Q 045577          265 AEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIIDEQTKMKGPFSA------  331 (392)
Q Consensus       265 ~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld~~~~~~~~~~~------  331 (392)
                      .++.++|+|||++........ ......|++.|++ ||..      ...|+|+.|+++ +++.+..++.+....      
T Consensus       151 ~~~~~~l~dfg~~~~~~~~~~-~~~~~~~~~~y~~-pE~~~~~~~~~~~Dv~slGvil~el~tg~~p~~~~~~~~~~~~~  228 (292)
T cd06657         151 HDGRVKLSDFGFCAQVSKEVP-RRKSLVGTPYWMA-PELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMI  228 (292)
T ss_pred             CCCCEEEcccccceecccccc-cccccccCccccC-HHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH
Confidence            999999999999876542211 1123467888999 6654      367999999876 455443332221111      


Q ss_pred             ------------HHHHHHHHHHHhhcccCcCCCCCHHHHHHH
Q 045577          332 ------------DELVKCIEVGLLCVQQRIEDWPTMSSVLTM  361 (392)
Q Consensus       332 ------------~~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~  361 (392)
                                  .....+.+++.+|++.+|.+||++.++++.
T Consensus       229 ~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~R~~~~~ll~~  270 (292)
T cd06657         229 RDNLPPKLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKH  270 (292)
T ss_pred             HhhCCcccCCcccCCHHHHHHHHHHHhCCcccCcCHHHHhcC
Confidence                        112345667889999999999999998873

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo

>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]

Probab=99.67  E-value=2.7e-17  Score=161.62  Aligned_cols=174  Identities=18%  Similarity=0.223  Sum_probs=132.7

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEc
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLD  264 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~  264 (392)
                      |+..++.... |.....++|||.++.|.+..+...++-...-..+..++.||+.||.|||+.   +.+||||...|||+.
T Consensus       450 HphIikLIGv-~~e~P~WivmEL~~~GELr~yLq~nk~sL~l~tL~ly~~Qi~talaYLeSk---rfVHRDIAaRNiLVs  525 (974)
T KOG4257|consen  450 HPHIIKLIGV-CVEQPMWIVMELAPLGELREYLQQNKDSLPLRTLTLYCYQICTALAYLESK---RFVHRDIAARNILVS  525 (974)
T ss_pred             Ccchhheeee-eeccceeEEEecccchhHHHHHHhccccchHHHHHHHHHHHHHHHHHHHhh---chhhhhhhhhheeec
Confidence            7888877665 667789999999999999987776665555555788999999999999998   899999999999999


Q ss_pred             CCCCCeEeeeeceEEeCCCCcceeceeeecccccCchhHH-----HHHHHhcCCCcc-e-------------------ee
Q 045577          265 AEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELL-----QAWKLWSEGDPM-E-------------------II  319 (392)
Q Consensus       265 ~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~-----~~~diws~G~v~-~-------------------~l  319 (392)
                      ..-.+|++|||+++.+.++.-...++..-...|||++.+.     .+.|+|-+|..+ |                   .+
T Consensus       526 Sp~CVKLaDFGLSR~~ed~~yYkaS~~kLPIKWmaPESINfRrFTtASDVWMFgVCmWEIl~lGvkPfqgvkNsDVI~~i  605 (974)
T KOG4257|consen  526 SPQCVKLADFGLSRYLEDDAYYKASRGKLPIKWMAPESINFRRFTTASDVWMFGVCMWEILSLGVKPFQGVKNSDVIGHI  605 (974)
T ss_pred             CcceeeecccchhhhccccchhhccccccceeecCccccchhcccchhhHHHHHHHHHHHHHhcCCccccccccceEEEe
Confidence            9999999999999998755444444444567889933322     367777766432 2                   22


Q ss_pred             cccccCCCCCCHHHHHHHHHHHHhhcccCcCCCCCHHHHHHHHcc
Q 045577          320 DEQTKMKGPFSADELVKCIEVGLLCVQQRIEDWPTMSSVLTMLSN  364 (392)
Q Consensus       320 d~~~~~~~~~~~~~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~L~~  364 (392)
                      +.+.  +.+.++.+...+..++.+||+.+|.+||.+.++...|+.
T Consensus       606 EnGe--RlP~P~nCPp~LYslmskcWayeP~kRPrftei~~~lsd  648 (974)
T KOG4257|consen  606 ENGE--RLPCPPNCPPALYSLMSKCWAYEPSKRPRFTEIKAILSD  648 (974)
T ss_pred             cCCC--CCCCCCCCChHHHHHHHHHhccCcccCCcHHHHHHHHHH
Confidence            2211  223445566677788889999999999999988877654

>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5

Probab=99.67  E-value=4.5e-17  Score=157.20  Aligned_cols=158  Identities=22%  Similarity=0.323  Sum_probs=113.3

Q ss_pred             CCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEcCCCCCeEeeeece
Q 045577          198 DGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEINPNISDFGPA  277 (392)
Q Consensus       198 ~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~~~~~~kl~DFGla  277 (392)
                      ....|++|||+.+ ++....... .......+..++.|++.||.|||+.   +++||||||+||+++.++.+||+|||++
T Consensus        80 ~~~~~lv~e~~~~-~l~~~~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~Nil~~~~~~~kl~dfg~~  154 (334)
T cd07855          80 FKDVYVVMDLMES-DLHHIIHSD-QPLTEEHIRYFLYQLLRGLKYIHSA---NVIHRDLKPSNLLVNEDCELRIGDFGMA  154 (334)
T ss_pred             CceEEEEEehhhh-hHHHHhccC-CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCcEEecccccc
Confidence            3568999999974 554433222 2234555788999999999999998   8999999999999999999999999999


Q ss_pred             EEeCCCCc---ceeceeeecccccCchhHH-------HHHHHhcCCCcc-eeecccccCCCCCC----------------
Q 045577          278 RIFGDQTE---EVTGRVIGTQTLKTVPELL-------QAWKLWSEGDPM-EIIDEQTKMKGPFS----------------  330 (392)
Q Consensus       278 ~~~~~~~~---~~~~~~~gt~~y~a~~~~~-------~~~diws~G~v~-~~ld~~~~~~~~~~----------------  330 (392)
                      +.......   .......|+..|++ ||..       ...|+|+.|+++ +++.+.+.+.+...                
T Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~y~~-PE~~~~~~~~~~~~Di~slG~~l~el~~g~~pf~~~~~~~~~~~~~~~~g~~~~  233 (334)
T cd07855         155 RGLSSSPTEHKYFMTEYVATRWYRA-PELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLFPGKNYVHQLKLILSVLGSPSE  233 (334)
T ss_pred             eeecccCcCCCcccccccccccccC-hHHhcCCcccccccchHHHHHHHHHHHcCCCccCCCChHHHHHHHHHHhCCChh
Confidence            87642111   11223467888998 6653       357999999876 44444333321110                


Q ss_pred             ------------------------------HHHHHHHHHHHHhhcccCcCCCCCHHHHHHH
Q 045577          331 ------------------------------ADELVKCIEVGLLCVQQRIEDWPTMSSVLTM  361 (392)
Q Consensus       331 ------------------------------~~~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~  361 (392)
                                                    ......+.+++..|++.+|++||++.++++.
T Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~  294 (334)
T cd07855         234 EVLNRIGSDRVRKYIQNLPRKQPVPWSKIFPKASPEALDLLSQMLQFDPEERITVEQALQH  294 (334)
T ss_pred             HhhhhhchhhHHHHHhhcccCCCCCHHHHcccCCHHHHHHHHHHccCChhhCcCHHHHHhC
Confidence                                          0112456678889999999999999998874

Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the

>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

Probab=99.67  E-value=5.6e-17  Score=156.01  Aligned_cols=160  Identities=24%  Similarity=0.339  Sum_probs=114.4

Q ss_pred             CCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEcCCCCCeEeeeeceE
Q 045577          199 GEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEINPNISDFGPAR  278 (392)
Q Consensus       199 ~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~~~~~~kl~DFGla~  278 (392)
                      ...|++|||+.. ++.....+.. ......+..++.|++.||.|||+.   +++|+||||.||+++.++.++|+|||++.
T Consensus        77 ~~~~lv~e~~~~-~l~~~l~~~~-~l~~~~~~~i~~~l~~~l~~LH~~---gi~H~dlkp~nili~~~~~~~L~dfg~~~  151 (330)
T cd07834          77 NDVYIVTELMET-DLHKVIKSPQ-PLTDDHIQYFLYQILRGLKYLHSA---NVIHRDLKPSNILVNSNCDLKICDFGLAR  151 (330)
T ss_pred             cceEEEecchhh-hHHHHHhCCC-CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEcccCceE
Confidence            368999999984 4544333322 234455788999999999999998   89999999999999999999999999998


Q ss_pred             EeCCCCc--ceeceeeecccccCchhHH-------HHHHHhcCCCcc-eeecccccCCCCCCHH----------------
Q 045577          279 IFGDQTE--EVTGRVIGTQTLKTVPELL-------QAWKLWSEGDPM-EIIDEQTKMKGPFSAD----------------  332 (392)
Q Consensus       279 ~~~~~~~--~~~~~~~gt~~y~a~~~~~-------~~~diws~G~v~-~~ld~~~~~~~~~~~~----------------  332 (392)
                      .......  .......++..|++ ||..       ...|+|+.|+++ +++.+.+.+......+                
T Consensus       152 ~~~~~~~~~~~~~~~~~~~~y~a-PE~~~~~~~~~~~sDi~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~  230 (330)
T cd07834         152 GVDPDEDEKGFLTEYVVTRWYRA-PELLLSSSRYTKAIDIWSVGCIFAELLTRKPLFPGRDYIDQLNLIVEVLGTPSEED  230 (330)
T ss_pred             eecccccccccccccccccCcCC-ceeeecccCCCcchhHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHhcCCCChhH
Confidence            7653221  12233467888888 5543       357999999876 4554433332211100                


Q ss_pred             ------------------------------HHHHHHHHHHhhcccCcCCCCCHHHHHHH--Hcc
Q 045577          333 ------------------------------ELVKCIEVGLLCVQQRIEDWPTMSSVLTM--LSN  364 (392)
Q Consensus       333 ------------------------------~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~--L~~  364 (392)
                                                    ....+.+++..|++.+|++||++.++++.  +++
T Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~~~~  294 (330)
T cd07834         231 LKFITSEKARNYLKSLPKKPKKPLSKLFPGASPEAIDLLEKMLVFDPKKRITADEALAHPYLAQ  294 (330)
T ss_pred             hhhccccchhhHHhhcccCCcchhHHhcccCCHHHHHHHHHHccCChhhCCCHHHHHhCccHHh
Confidence                                          11245678889999999999999999975  544

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and

>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

Probab=99.67  E-value=6e-17  Score=151.39  Aligned_cols=171  Identities=19%  Similarity=0.290  Sum_probs=123.3

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEc
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLD  264 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~  264 (392)
                      +++.++.......++..+++||+++++++.....+.. ......+..++.|++.||.|||+.   +++|+|+||+||+++
T Consensus        61 ~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~l~~~~~~~i~~ql~~~l~~Lh~~---~~~H~dl~~~ni~i~  136 (280)
T cd05581          61 HPGIIKLYYTFQDEENLYFVLEYAPNGELLQYIRKYG-SLDEKCTRFYAAEILLALEYLHSK---GIIHRDLKPENILLD  136 (280)
T ss_pred             CCCchhHHHHhcCCceEEEEEcCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHeEEC
Confidence            4555555555555678999999999999877654433 334555788999999999999998   899999999999999


Q ss_pred             CCCCCeEeeeeceEEeCCCCc-------------------ceeceeeecccccCchhHH------HHHHHhcCCCcc-ee
Q 045577          265 AEINPNISDFGPARIFGDQTE-------------------EVTGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EI  318 (392)
Q Consensus       265 ~~~~~kl~DFGla~~~~~~~~-------------------~~~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~  318 (392)
                      .++.++++|||++........                   .......++..|++ ||..      .+.|+|+.|+++ ++
T Consensus       137 ~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-Pe~~~~~~~~~~~Di~slG~~l~~l  215 (280)
T cd05581         137 KDMHIKITDFGTAKVLDPNSSPESNKGDATNIDSQIEKNRRRFASFVGTAEYVS-PELLNEKPAGKSSDLWALGCIIYQM  215 (280)
T ss_pred             CCCCEEecCCccccccCCccccccCCCCCccccccccccccccccccCCccccC-HHHhCCCCCChhhhHHHHHHHHHHH
Confidence            999999999999987642211                   11223456788888 6643      478999999875 45


Q ss_pred             ecccccCCCCC---------------CHHHHHHHHHHHHhhcccCcCCCCCH----HHHHH
Q 045577          319 IDEQTKMKGPF---------------SADELVKCIEVGLLCVQQRIEDWPTM----SSVLT  360 (392)
Q Consensus       319 ld~~~~~~~~~---------------~~~~~~~~~~i~~~Cl~~dp~~RPsm----~eVv~  360 (392)
                      +.+...+....               +......+.+++..|++.+|++||++    +++++
T Consensus       216 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~ll~  276 (280)
T cd05581         216 LTGKPPFRGSNEYLTFQKILKLEYSFPPNFPPDAKDLIEKLLVLDPQDRLGVNEGYDELKA  276 (280)
T ss_pred             HhCCCCCCCccHHHHHHHHHhcCCCCCCccCHHHHHHHHHHhcCCHhhCCCcccCHHHHhc
Confidence            54433332211               11112356678889999999999999    66553

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto

>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.67  E-value=3.8e-17  Score=149.78  Aligned_cols=122  Identities=22%  Similarity=0.233  Sum_probs=96.6

Q ss_pred             CCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEcCCCCCeEeeeece
Q 045577          198 DGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEINPNISDFGPA  277 (392)
Q Consensus       198 ~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~~~~~~kl~DFGla  277 (392)
                      ...+++||||+.+|.+.....+..... +.....+..+|..||.|||+.   +|+.||+|.+|.++|++|++||+|||++
T Consensus       240 ~drlCFVMeyanGGeLf~HLsrer~Fs-E~RtRFYGaEIvsAL~YLHs~---~ivYRDlKLENLlLDkDGHIKitDFGLC  315 (516)
T KOG0690|consen  240 QDRLCFVMEYANGGELFFHLSRERVFS-EDRTRFYGAEIVSALGYLHSR---NIVYRDLKLENLLLDKDGHIKITDFGLC  315 (516)
T ss_pred             CceEEEEEEEccCceEeeehhhhhccc-chhhhhhhHHHHHHhhhhhhC---CeeeeechhhhheeccCCceEeeecccc
Confidence            467999999999999988655433222 222455788899999999998   8999999999999999999999999999


Q ss_pred             EEeCCCCcceeceeeecccccCchhHH------HHHHHhcCCCcc-eeecccccC
Q 045577          278 RIFGDQTEEVTGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIIDEQTKM  325 (392)
Q Consensus       278 ~~~~~~~~~~~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld~~~~~  325 (392)
                      +--- .....+.+.+||+.|+| ||++      .++|.|-.|.++ +++.++.++
T Consensus       316 KE~I-~~g~t~kTFCGTPEYLA-PEVleDnDYgraVDWWG~GVVMYEMmCGRLPF  368 (516)
T KOG0690|consen  316 KEEI-KYGDTTKTFCGTPEYLA-PEVLEDNDYGRAVDWWGVGVVMYEMMCGRLPF  368 (516)
T ss_pred             hhcc-cccceeccccCChhhcC-chhhccccccceeehhhhhHHHHHHHhccCcc
Confidence            7522 22344566899999999 7766      478999999877 677774444

>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

Probab=99.67  E-value=4.6e-17  Score=150.78  Aligned_cols=165  Identities=22%  Similarity=0.213  Sum_probs=119.4

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEc
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLD  264 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~  264 (392)
                      |++-+......+.+...|+++||++++++....... +......+..++.|+++||.|||+.   +++|+||+|+||+++
T Consensus        59 h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~l~~~~~~~~~~~i~~~l~~lh~~---~i~h~dl~~~nil~~  134 (258)
T cd05578          59 HPFLVNLWYSFQDEENMYLVVDLLLGGDLRYHLSQK-VKFSEEQVKFWICEIVLALEYLHSK---GIIHRDIKPDNILLD  134 (258)
T ss_pred             CCChHHHHHhhcCCCeEEEEEeCCCCCCHHHHHHhc-CCcCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeEEc
Confidence            444444444444556799999999999988765443 3344555788999999999999998   899999999999999


Q ss_pred             CCCCCeEeeeeceEEeCCCCcceeceeeecccccCchhHH------HHHHHhcCCCcc-eeecccccCCCCC--------
Q 045577          265 AEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIIDEQTKMKGPF--------  329 (392)
Q Consensus       265 ~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld~~~~~~~~~--------  329 (392)
                      .++.++|+|||++.......  ......|+..|++ ||..      ...|+|+.|+++ +++.+..++....        
T Consensus       135 ~~~~~~l~d~~~~~~~~~~~--~~~~~~~~~~y~~-PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~  211 (258)
T cd05578         135 EQGHVHITDFNIATKVTPDT--LTTSTSGTPGYMA-PEVLCRQGYSVAVDWWSLGVTAYECLRGKRPYRGHSRTIRDQIR  211 (258)
T ss_pred             CCCCEEEeecccccccCCCc--cccccCCChhhcC-HHHHcccCCCCcccchhhHHHHHHHHhCCCCCCCCCccHHHHHH
Confidence            99999999999987654322  2223567888998 6654      367999999876 4444432222111        


Q ss_pred             ----------CHHHHHHHHHHHHhhcccCcCCCCCHH
Q 045577          330 ----------SADELVKCIEVGLLCVQQRIEDWPTMS  356 (392)
Q Consensus       330 ----------~~~~~~~~~~i~~~Cl~~dp~~RPsm~  356 (392)
                                +......+.+++.+|++.+|++||+..
T Consensus       212 ~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~  248 (258)
T cd05578         212 AKQETADVLYPATWSTEAIDAINKLLERDPQKRLGDN  248 (258)
T ss_pred             HHhccccccCcccCcHHHHHHHHHHccCChhHcCCcc
Confidence                      111224666788899999999999983

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.

>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants

Probab=99.67  E-value=1.1e-16  Score=154.70  Aligned_cols=159  Identities=23%  Similarity=0.344  Sum_probs=113.7

Q ss_pred             CCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEcCCCCCeEeeeeceE
Q 045577          199 GEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEINPNISDFGPAR  278 (392)
Q Consensus       199 ~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~~~~~~kl~DFGla~  278 (392)
                      ...|+++||+. +++....... .......+..++.|++.||.|||+.   +++||||||+||+++.++.+||+|||+++
T Consensus        82 ~~~~lv~e~~~-~~L~~~~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~---~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~  156 (337)
T cd07858          82 NDVYIVYELMD-TDLHQIIRSS-QTLSDDHCQYFLYQLLRGLKYIHSA---NVLHRDLKPSNLLLNANCDLKICDFGLAR  156 (337)
T ss_pred             CcEEEEEeCCC-CCHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCCCEEECcCcccc
Confidence            45899999997 4444333222 1234555788999999999999998   89999999999999999999999999998


Q ss_pred             EeCCCCcceeceeeecccccCchhHH-------HHHHHhcCCCcc-eeecccccCCCCCC--------------------
Q 045577          279 IFGDQTEEVTGRVIGTQTLKTVPELL-------QAWKLWSEGDPM-EIIDEQTKMKGPFS--------------------  330 (392)
Q Consensus       279 ~~~~~~~~~~~~~~gt~~y~a~~~~~-------~~~diws~G~v~-~~ld~~~~~~~~~~--------------------  330 (392)
                      ...... .......++..|+| ||..       .+.|+|+.|+++ +++.+.+.+.+...                    
T Consensus       157 ~~~~~~-~~~~~~~~~~~y~a-PE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~  234 (337)
T cd07858         157 TTSEKG-DFMTEYVVTRWYRA-PELLLNCSEYTTAIDVWSVGCIFAELLGRKPLFPGKDYVHQLKLITELLGSPSEEDLG  234 (337)
T ss_pred             ccCCCc-ccccccccccCccC-hHHHhcCCCCCCcccHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCChHHhh
Confidence            754221 12223457888999 6643       257999999876 44444333221100                    


Q ss_pred             --------------------------HHHHHHHHHHHHhhcccCcCCCCCHHHHHHH--Hcc
Q 045577          331 --------------------------ADELVKCIEVGLLCVQQRIEDWPTMSSVLTM--LSN  364 (392)
Q Consensus       331 --------------------------~~~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~--L~~  364 (392)
                                                ......+.+++.+|++.+|++||++.++++.  ++.
T Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rps~~ell~h~~~~~  296 (337)
T cd07858         235 FIRNEKARRYIRSLPYTPRQSFARLFPHANPLAIDLLEKMLVFDPSKRITVEEALAHPYLAS  296 (337)
T ss_pred             hcCchhhhHHHHhcCcccccCHHHHcccCCHHHHHHHHHHhcCChhhccCHHHHHcCcchhh
Confidence                                      0112345678889999999999999999877  554

Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati

>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase

Probab=99.66  E-value=8.7e-17  Score=155.88  Aligned_cols=151  Identities=25%  Similarity=0.330  Sum_probs=110.2

Q ss_pred             CeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEcCCCCCeEeeeeceEE
Q 045577          200 EVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEINPNISDFGPARI  279 (392)
Q Consensus       200 ~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~~~~~~kl~DFGla~~  279 (392)
                      ..++++||+. +++......  .......+..++.|++.||.|||+.   +++|+||||+||+++.++.+||+|||++..
T Consensus        94 ~~~lv~e~~~-~~L~~~~~~--~~l~~~~~~~~~~ql~~aL~~LH~~---gi~H~dlkp~Nill~~~~~~kL~dfg~~~~  167 (343)
T cd07851          94 DVYLVTHLMG-ADLNNIVKC--QKLSDDHIQFLVYQILRGLKYIHSA---GIIHRDLKPSNIAVNEDCELKILDFGLARH  167 (343)
T ss_pred             cEEEEEecCC-CCHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCCEEEcccccccc
Confidence            4899999985 455443322  1234445788999999999999998   899999999999999999999999999876


Q ss_pred             eCCCCcceeceeeecccccCchhHH-------HHHHHhcCCCcc-eeecccccCCCCCCHH-------------------
Q 045577          280 FGDQTEEVTGRVIGTQTLKTVPELL-------QAWKLWSEGDPM-EIIDEQTKMKGPFSAD-------------------  332 (392)
Q Consensus       280 ~~~~~~~~~~~~~gt~~y~a~~~~~-------~~~diws~G~v~-~~ld~~~~~~~~~~~~-------------------  332 (392)
                      ....    .....++..|++ ||..       ...|+|+.|+++ +++.+...+......+                   
T Consensus       168 ~~~~----~~~~~~~~~y~a-PE~~~~~~~~~~~~DvwslGv~l~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~  242 (343)
T cd07851         168 TDDE----MTGYVATRWYRA-PEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLFPGSDHIDQLKRIMNLVGTPDEELLQK  242 (343)
T ss_pred             cccc----ccCCcccccccC-HHHHhCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHHhh
Confidence            5322    222457788998 6654       368999999876 4554433332211111                   


Q ss_pred             ---------------------------HHHHHHHHHHhhcccCcCCCCCHHHHHHH
Q 045577          333 ---------------------------ELVKCIEVGLLCVQQRIEDWPTMSSVLTM  361 (392)
Q Consensus       333 ---------------------------~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~  361 (392)
                                                 ....+.+++..|++.+|++|||+.+|++.
T Consensus       243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~l~dli~~~l~~~P~~Rpt~~ell~h  298 (343)
T cd07851         243 ISSESARNYIQSLPQMPKKDFKEVFSGANPLAIDLLEKMLVLDPDKRITAAEALAH  298 (343)
T ss_pred             ccchhHHHHHHhccccCCCCHHHHhccCCHHHHHHHHHhCCCChhhCCCHHHHhcC
Confidence                                       12356678889999999999999998763

Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK

>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

Probab=99.66  E-value=1.2e-16  Score=150.65  Aligned_cols=156  Identities=19%  Similarity=0.214  Sum_probs=112.6

Q ss_pred             CCeeEEecCccCCCcChhhhhh---hccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEcCCCCCeEeeee
Q 045577          199 GEVFLMFEGIKLPDKSEFTCEF---ECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEINPNISDFG  275 (392)
Q Consensus       199 ~~~~lv~e~~~~~~l~~~~~~~---~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~~~~~~kl~DFG  275 (392)
                      +..|++|||++++++.....+.   .-......+..++.|++.||.|||+.   +++|+||+|.||+++.++.+||+|||
T Consensus        74 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~---~i~H~dl~~~nil~~~~~~~~l~dfg  150 (287)
T cd06621          74 SSIGIAMEYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHSR---KIIHRDIKPSNILLTRKGQVKLCDFG  150 (287)
T ss_pred             CeEEEEEEecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEecCCeEEEeecc
Confidence            4589999999999886643221   11123444778999999999999998   89999999999999999999999999


Q ss_pred             ceEEeCCCCcceeceeeecccccCchhHH------HHHHHhcCCCcc-eeecccccCCCCC-------------------
Q 045577          276 PARIFGDQTEEVTGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIIDEQTKMKGPF-------------------  329 (392)
Q Consensus       276 la~~~~~~~~~~~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld~~~~~~~~~-------------------  329 (392)
                      ++.......   .....++..|++ ||..      ...|+|+.|+++ +++.+..++....                   
T Consensus       151 ~~~~~~~~~---~~~~~~~~~y~~-pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~  226 (287)
T cd06621         151 VSGELVNSL---AGTFTGTSFYMA-PERIQGKPYSITSDVWSLGLTLLEVAQNRFPFPPEGEPPLGPIELLSYIVNMPNP  226 (287)
T ss_pred             ccccccccc---cccccCCccccC-HHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCcccCCCCChHHHHHHHhcCCch
Confidence            987543211   112456778888 6644      267999999876 4444432222110                   


Q ss_pred             ------C--HHHHHHHHHHHHhhcccCcCCCCCHHHHHHH
Q 045577          330 ------S--ADELVKCIEVGLLCVQQRIEDWPTMSSVLTM  361 (392)
Q Consensus       330 ------~--~~~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~  361 (392)
                            .  ......+.+++.+|++.+|++||++.||++.
T Consensus       227 ~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~eil~~  266 (287)
T cd06621         227 ELKDEPGNGIKWSEEFKDFIKQCLEKDPTRRPTPWDMLEH  266 (287)
T ss_pred             hhccCCCCCCchHHHHHHHHHHHcCCCcccCCCHHHHHhC
Confidence                  0  0112356788889999999999999999873

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]

Probab=99.66  E-value=1.1e-16  Score=151.01  Aligned_cols=169  Identities=17%  Similarity=0.144  Sum_probs=119.5

Q ss_pred             ccccccCcCCCCCeeEEecCccCCCcChhhhhhhccc-cchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEcCC
Q 045577          188 CKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSK-YSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAE  266 (392)
Q Consensus       188 CvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~~-~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~~~  266 (392)
                      +......+..+.-.|++||||.+||+.....++.... .+..+..++.++..||+|||-.   +||.|||||+|||+.++
T Consensus       139 lPTLYa~fet~~~~cl~meyCpGGdL~~LrqkQp~~~fse~~aRFYaAEvl~ALEYLHml---GivYRDLKPENILvred  215 (459)
T KOG0610|consen  139 LPTLYASFETDKYSCLVMEYCPGGDLHSLRQKQPGKRFSESAARFYAAEVLLALEYLHML---GIVYRDLKPENILVRED  215 (459)
T ss_pred             cchhhheeeccceeEEEEecCCCccHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHhh---ceeeccCCcceeEEecC
Confidence            3333333333556899999999999987555543322 4444677899999999999998   99999999999999999


Q ss_pred             CCCeEeeeeceEEeC-------C----------------------C---C-c----------------------ceecee
Q 045577          267 INPNISDFGPARIFG-------D----------------------Q---T-E----------------------EVTGRV  291 (392)
Q Consensus       267 ~~~kl~DFGla~~~~-------~----------------------~---~-~----------------------~~~~~~  291 (392)
                      |++.|+||-|+....       .                      .   . .                      ..+...
T Consensus       216 GHIMLsDFDLS~~~~~~Pt~~~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~aep~~~RSnSF  295 (459)
T KOG0610|consen  216 GHIMLSDFDLSLRCPVSPTLVKSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASRSLPELVAEPTGARSNSF  295 (459)
T ss_pred             CcEEeeeccccccCCCCCeeeccCCCCCCCCCcccccccccccccchhccccccccccccccccchhhhcCCCCcccccc
Confidence            999999998764321       0                      0   0 0                      011225


Q ss_pred             eecccccCchhHHH------HHHHhcCCCcc-eeecccccCCCCCCHHHHH-----------------HHHHHHHhhccc
Q 045577          292 IGTQTLKTVPELLQ------AWKLWSEGDPM-EIIDEQTKMKGPFSADELV-----------------KCIEVGLLCVQQ  347 (392)
Q Consensus       292 ~gt~~y~a~~~~~~------~~diws~G~v~-~~ld~~~~~~~~~~~~~~~-----------------~~~~i~~~Cl~~  347 (392)
                      +||-.|+| ||+..      ++|.|.+|+++ ||+.+.-++.+....+.+.                 .+.+++...+..
T Consensus       296 VGThEYlA-PEvI~G~GHgsAVDWWtfGIflYEmLyG~TPFKG~~~~~Tl~NIv~~~l~Fp~~~~vs~~akDLIr~LLvK  374 (459)
T KOG0610|consen  296 VGTHEYLA-PEVIRGEGHGSAVDWWTFGIFLYEMLYGTTPFKGSNNKETLRNIVGQPLKFPEEPEVSSAAKDLIRKLLVK  374 (459)
T ss_pred             cccccccc-ceeeecCCCCchhhHHHHHHHHHHHHhCCCCcCCCCchhhHHHHhcCCCcCCCCCcchhHHHHHHHHHhcc
Confidence            78889999 77764      88999999976 6777766666665544433                 344566677777


Q ss_pred             CcCCCCC----HHHHHH
Q 045577          348 RIEDWPT----MSSVLT  360 (392)
Q Consensus       348 dp~~RPs----m~eVv~  360 (392)
                      ||.+|-.    +.||-+
T Consensus       375 dP~kRlg~~rGA~eIK~  391 (459)
T KOG0610|consen  375 DPSKRLGSKRGAAEIKR  391 (459)
T ss_pred             ChhhhhccccchHHhhc
Confidence            7777765    555544

>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3

Probab=99.66  E-value=1.1e-16  Score=153.23  Aligned_cols=167  Identities=19%  Similarity=0.222  Sum_probs=114.8

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEc
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLD  264 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~  264 (392)
                      |++.++.......+...|++|||+.+ ++............+..+..++.|++.||.|||+.   +++|+||||+||+++
T Consensus        80 h~~iv~~~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~l~~~~~~~~~~qi~~al~~LH~~---gi~H~dl~p~nili~  155 (313)
T cd06633          80 HPNTIEYKGCYLKEHTAWLVMEYCLG-SASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSH---NMIHRDIKAGNILLT  155 (313)
T ss_pred             CCCCccEEEEEEeCCEEEEEEecCCC-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCChhhEEEC
Confidence            34444433333334568999999974 44333322222234455788999999999999998   899999999999999


Q ss_pred             CCCCCeEeeeeceEEeCCCCcceeceeeecccccCchhHH---------HHHHHhcCCCcc-eeecccccCCCCCCH---
Q 045577          265 AEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELL---------QAWKLWSEGDPM-EIIDEQTKMKGPFSA---  331 (392)
Q Consensus       265 ~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~---------~~~diws~G~v~-~~ld~~~~~~~~~~~---  331 (392)
                      .++.+||+|||++.....     .....|+..|++ ||..         ...|+|+.|+++ +++.+.+++......   
T Consensus       156 ~~~~~kL~dfg~~~~~~~-----~~~~~~~~~y~a-PE~~~~~~~~~~~~~sDv~slGvil~el~~g~~p~~~~~~~~~~  229 (313)
T cd06633         156 EPGQVKLADFGSASKSSP-----ANSFVGTPYWMA-PEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSAL  229 (313)
T ss_pred             CCCCEEEeecCCCcccCC-----CCCccccccccC-hhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHH
Confidence            999999999998764321     123467888999 6653         256999999876 444443332211110   


Q ss_pred             --------------HHHHHHHHHHHhhcccCcCCCCCHHHHHHH
Q 045577          332 --------------DELVKCIEVGLLCVQQRIEDWPTMSSVLTM  361 (392)
Q Consensus       332 --------------~~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~  361 (392)
                                    .....+.+++.+|++.+|++||++.++++.
T Consensus       230 ~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rp~~~~~l~~  273 (313)
T cd06633         230 YHIAQNDSPTLQSNEWTDSFRGFVDYCLQKIPQERPASAELLRH  273 (313)
T ss_pred             HHHHhcCCCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence                          111246677889999999999999998854

Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co

>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]

Probab=99.65  E-value=1.9e-16  Score=160.52  Aligned_cols=171  Identities=18%  Similarity=0.229  Sum_probs=117.4

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhh--hccc-cchhhhhHHHHHHHhhhhcCcCCCCceeeccccccee
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEF--ECSK-YSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNV  261 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~--~~~~-~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NI  261 (392)
                      |++.+|..-..-...-.|+.+|.|.-. |.+.....  .-.. .....+.++.|++.||++||+-   +|+||||||.||
T Consensus       562 H~NviRyyc~E~d~qF~YIalELC~~s-L~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHLHsl---~iVHRDLkPQNI  637 (903)
T KOG1027|consen  562 HPNVIRYYCSEQDRQFLYIALELCACS-LQDLIESSGLDVEMQSDIDPISVLSQIASGLAHLHSL---KIVHRDLKPQNI  637 (903)
T ss_pred             CCceEEEEeeccCCceEEEEehHhhhh-HHHHHhccccchhhcccccHHHHHHHHHHHHHHHHhc---ccccccCCCceE
Confidence            778888765544456689999998742 22211110  0000 1123577899999999999996   899999999999


Q ss_pred             EEcC---C--CCCeEeeeeceEEeCCCCc--ceeceeeecccccCchhHHH------HHHHhcCCCcce-eecccccCCC
Q 045577          262 LLDA---E--INPNISDFGPARIFGDQTE--EVTGRVIGTQTLKTVPELLQ------AWKLWSEGDPME-IIDEQTKMKG  327 (392)
Q Consensus       262 ll~~---~--~~~kl~DFGla~~~~~~~~--~~~~~~~gt~~y~a~~~~~~------~~diws~G~v~~-~ld~~~~~~~  327 (392)
                      ||+.   +  ..++|+|||+++.+.....  .......||.||+| ||.+.      +.|+++.||++. .+.++.-..+
T Consensus       638 LI~~~~~~~~~ra~iSDfglsKkl~~~~sS~~r~s~~sGt~GW~A-PE~L~~~~~~~avDiFslGCvfyYvltgG~HpFG  716 (903)
T KOG1027|consen  638 LISVPSADGTLRAKISDFGLSKKLAGGKSSFSRLSGGSGTSGWQA-PEQLREDRKTQAVDIFSLGCVFYYVLTGGSHPFG  716 (903)
T ss_pred             EEEccCCCcceeEEecccccccccCCCcchhhcccCCCCcccccC-HHHHhccccCcccchhhcCceEEEEecCCccCCC
Confidence            9976   2  4689999999998873222  22345789999999 77663      779999999884 4443221111


Q ss_pred             C-CCH--------------HHHH--HHHHHHHhhcccCcCCCCCHHHHHH
Q 045577          328 P-FSA--------------DELV--KCIEVGLLCVQQRIEDWPTMSSVLT  360 (392)
Q Consensus       328 ~-~~~--------------~~~~--~~~~i~~~Cl~~dp~~RPsm~eVv~  360 (392)
                      + ...              +...  ...+++..++..+|..||++.+|+.
T Consensus       717 d~~~R~~NIl~~~~~L~~L~~~~d~eA~dLI~~ml~~dP~~RPsa~~VL~  766 (903)
T KOG1027|consen  717 DSLERQANILTGNYTLVHLEPLPDCEAKDLISRMLNPDPQLRPSATDVLN  766 (903)
T ss_pred             chHHhhhhhhcCccceeeeccCchHHHHHHHHHhcCCCcccCCCHHHHhC
Confidence            1 100              0111  5667888999999999999999873

>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11

Probab=99.64  E-value=2.2e-16  Score=146.38  Aligned_cols=170  Identities=17%  Similarity=0.181  Sum_probs=119.6

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhh---hhccccchhhhhHHHHHHHhhhhcCcCCCCceeeccccccee
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCE---FECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNV  261 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~---~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NI  261 (392)
                      |++.++...........++++||++++++.....+   ......+..+..++.|++.||.|||+.   +++|+|+||+||
T Consensus        61 h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~h~~l~~~ni  137 (260)
T cd08222          61 HPAIVKFHASFLERDAFCIITEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQR---RILHRDLKAKNI  137 (260)
T ss_pred             CCcHHHHHHHHhcCCceEEEEEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHc---CccccCCChhhe
Confidence            55666555444445678999999999988764332   112234555788999999999999998   899999999999


Q ss_pred             EEcCCCCCeEeeeeceEEeCCCCcceeceeeecccccCchhHH------HHHHHhcCCCcc-eeecccccCCC-------
Q 045577          262 LLDAEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIIDEQTKMKG-------  327 (392)
Q Consensus       262 ll~~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld~~~~~~~-------  327 (392)
                      +++. +.+||+|||+++...... .......|+..|++ ||..      ...|+|+.|.++ +++.+...+..       
T Consensus       138 li~~-~~~~l~d~g~~~~~~~~~-~~~~~~~~~~~~~~-pe~~~~~~~~~~~Dv~slG~~~~~l~~~~~~~~~~~~~~~~  214 (260)
T cd08222         138 FLKN-NLLKIGDFGVSRLLMGSC-DLATTFTGTPYYMS-PEALKHQGYDSKSDIWSLGCILYEMCCLAHAFEGQNFLSVV  214 (260)
T ss_pred             Eeec-CCEeecccCceeecCCCc-ccccCCCCCcCccC-HHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCccHHHHH
Confidence            9975 469999999988764221 12223457788988 6654      257999999766 33333222211       


Q ss_pred             ---------CCCHHHHHHHHHHHHhhcccCcCCCCCHHHHHH
Q 045577          328 ---------PFSADELVKCIEVGLLCVQQRIEDWPTMSSVLT  360 (392)
Q Consensus       328 ---------~~~~~~~~~~~~i~~~Cl~~dp~~RPsm~eVv~  360 (392)
                               ..+......+.+++.+|++.+|++||++.++++
T Consensus       215 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~  256 (260)
T cd08222         215 LRIVEGPTPSLPETYSRQLNSIMQSMLNKDPSLRPSAAEILR  256 (260)
T ss_pred             HHHHcCCCCCCcchhcHHHHHHHHHHhcCChhhCcCHHHHhh
Confidence                     111222345667888999999999999999875

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check

>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase

Probab=99.64  E-value=4e-16  Score=151.18  Aligned_cols=155  Identities=21%  Similarity=0.307  Sum_probs=110.4

Q ss_pred             CCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEcCCCCCeEeeeeceE
Q 045577          199 GEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEINPNISDFGPAR  278 (392)
Q Consensus       199 ~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~~~~~~kl~DFGla~  278 (392)
                      .+.|+++||+.. ++.....   -......+..++.|++.||.|||+.   +++||||||+||+++.++.+||+|||+++
T Consensus        93 ~~~~lv~e~~~~-~l~~~~~---~~~~~~~~~~~~~qi~~aL~~LH~~---~i~H~dlkp~NIll~~~~~~kL~dfg~~~  165 (342)
T cd07879          93 QDFYLVMPYMQT-DLQKIMG---HPLSEDKVQYLVYQMLCGLKYIHSA---GIIHRDLKPGNLAVNEDCELKILDFGLAR  165 (342)
T ss_pred             ceEEEEeccccc-CHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEeeCCCCc
Confidence            457999999864 3322111   1223444677899999999999998   89999999999999999999999999987


Q ss_pred             EeCCCCcceeceeeecccccCchhHH-------HHHHHhcCCCcc-eeecccccCCCCCCHH------------------
Q 045577          279 IFGDQTEEVTGRVIGTQTLKTVPELL-------QAWKLWSEGDPM-EIIDEQTKMKGPFSAD------------------  332 (392)
Q Consensus       279 ~~~~~~~~~~~~~~gt~~y~a~~~~~-------~~~diws~G~v~-~~ld~~~~~~~~~~~~------------------  332 (392)
                      ....    ......++..|+| ||..       ...|+|+.|+++ +++.++..+.+.....                  
T Consensus       166 ~~~~----~~~~~~~~~~y~a-PE~~~~~~~~~~~~Dv~slGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~  240 (342)
T cd07879         166 HADA----EMTGYVVTRWYRA-PEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGPEFVQ  240 (342)
T ss_pred             CCCC----CCCCceeeecccC-hhhhcCccccCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHH
Confidence            5431    1122467888999 6643       268999999876 4554433332211000                  


Q ss_pred             ----------------------------HHHHHHHHHHhhcccCcCCCCCHHHHHHH--HccC
Q 045577          333 ----------------------------ELVKCIEVGLLCVQQRIEDWPTMSSVLTM--LSNE  365 (392)
Q Consensus       333 ----------------------------~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~--L~~~  365 (392)
                                                  ....+.+++..|++.||++||++.+++..  +++.
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~~~~e~l~h~~f~~~  303 (342)
T cd07879         241 KLEDKAAKSYIKSLPKYPRKDFSTLFPKASPQAVDLLEKMLELDVDKRLTATEALEHPYFDSF  303 (342)
T ss_pred             HhcccchHHHHhhcCCcccchHHHHhcCCCHHHHHHHHHHcCCChhhCcCHHHHhcCcchhhc
Confidence                                        11246688889999999999999999854  6655

Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13

>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase

Probab=99.64  E-value=5.4e-16  Score=150.34  Aligned_cols=150  Identities=22%  Similarity=0.299  Sum_probs=108.2

Q ss_pred             CeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEcCCCCCeEeeeeceEE
Q 045577          200 EVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEINPNISDFGPARI  279 (392)
Q Consensus       200 ~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~~~~~~kl~DFGla~~  279 (392)
                      +.+++|||+ ++++......  ....+..+..++.|++.||.|||+.   +|+||||||+||+++.++.+|++|||++..
T Consensus        94 ~~~lv~e~~-~~~l~~~~~~--~~l~~~~~~~i~~qi~~al~~LH~~---gi~H~dlkp~Nill~~~~~~kl~dfg~~~~  167 (343)
T cd07880          94 DFYLVMPFM-GTDLGKLMKH--EKLSEDRIQFLVYQMLKGLKYIHAA---GIIHRDLKPGNLAVNEDCELKILDFGLARQ  167 (343)
T ss_pred             eEEEEEecC-CCCHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEeecccccc
Confidence            568999998 4555443222  2234555788999999999999998   899999999999999999999999999876


Q ss_pred             eCCCCcceeceeeecccccCchhHH-------HHHHHhcCCCcc-eeecccccCCCCCCHH-------------------
Q 045577          280 FGDQTEEVTGRVIGTQTLKTVPELL-------QAWKLWSEGDPM-EIIDEQTKMKGPFSAD-------------------  332 (392)
Q Consensus       280 ~~~~~~~~~~~~~gt~~y~a~~~~~-------~~~diws~G~v~-~~ld~~~~~~~~~~~~-------------------  332 (392)
                      ....    .....+++.|++ ||..       ...|+|+.|+++ +++.+...+.......                   
T Consensus       168 ~~~~----~~~~~~~~~y~a-PE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (343)
T cd07880         168 TDSE----MTGYVVTRWYRA-PEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLFKGHDHLDQLMEIMKVTGTPSKEFVQK  242 (343)
T ss_pred             cccC----ccccccCCcccC-HHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHh
Confidence            4321    122456788998 6643       368999999876 4444433332111000                   


Q ss_pred             ---------------------------HHHHHHHHHHhhcccCcCCCCCHHHHHH
Q 045577          333 ---------------------------ELVKCIEVGLLCVQQRIEDWPTMSSVLT  360 (392)
Q Consensus       333 ---------------------------~~~~~~~i~~~Cl~~dp~~RPsm~eVv~  360 (392)
                                                 ....+.+++.+|++.+|++||++.++++
T Consensus       243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~t~~~~l~  297 (343)
T cd07880         243 LQSEDAKNYVKKLPRFRKKDFRSLLPNANPLAVNVLEKMLVLDAESRITAAEALA  297 (343)
T ss_pred             hcchhHHHHHHhccccCcchHHHhccCCChHHHHHHHHHcCCChhhCCCHHHHhc
Confidence                                       0113567888999999999999999984

Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12

>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]

Probab=99.64  E-value=7e-17  Score=155.52  Aligned_cols=138  Identities=22%  Similarity=0.240  Sum_probs=106.5

Q ss_pred             cccccCcCCCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEcCCCC
Q 045577          189 KRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEIN  268 (392)
Q Consensus       189 vR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~~~~~  268 (392)
                      ||.....-.+..+|+.||-|-+|.+-.....+. ....+....++..+..|+.|||.+   +||.|||||+|.+++.+|.
T Consensus       483 vrLYrTfrd~kyvYmLmEaClGGElWTiLrdRg-~Fdd~tarF~~acv~EAfeYLH~k---~iIYRDLKPENllLd~~Gy  558 (732)
T KOG0614|consen  483 VRLYRTFRDSKYVYMLMEACLGGELWTILRDRG-SFDDYTARFYVACVLEAFEYLHRK---GIIYRDLKPENLLLDNRGY  558 (732)
T ss_pred             HHHHHHhccchhhhhhHHhhcCchhhhhhhhcC-CcccchhhhhHHHHHHHHHHHHhc---CceeccCChhheeeccCCc
Confidence            333333344567899999999998866543332 223344566778889999999998   8999999999999999999


Q ss_pred             CeEeeeeceEEeCCCCcceeceeeecccccCchhHH------HHHHHhcCCCcc-eeecccccCCCCCCHHH
Q 045577          269 PNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIIDEQTKMKGPFSADE  333 (392)
Q Consensus       269 ~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld~~~~~~~~~~~~~  333 (392)
                      +||.|||+|+.++...  .+-+.+||+.|.| ||+.      .+.|.|++|.++ |++.+.+++.+..+...
T Consensus       559 ~KLVDFGFAKki~~g~--KTwTFcGTpEYVA-PEIILnKGHD~avDyWaLGIli~ELL~G~pPFs~~dpmkt  627 (732)
T KOG0614|consen  559 LKLVDFGFAKKIGSGR--KTWTFCGTPEYVA-PEIILNKGHDRAVDYWALGILIYELLTGSPPFSGVDPMKT  627 (732)
T ss_pred             eEEeehhhHHHhccCC--ceeeecCCccccc-chhhhccCcchhhHHHHHHHHHHHHHcCCCCCCCCchHHH
Confidence            9999999999876433  3445899999999 6665      378999999876 78888888877665543

>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]

Probab=99.63  E-value=1.8e-16  Score=153.24  Aligned_cols=169  Identities=20%  Similarity=0.229  Sum_probs=120.3

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEc
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLD  264 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~  264 (392)
                      |+|.|........-+.+|+|||.+.++-+.-....+.....+..-..++.||+.||.|||.+   +|+|+||||+|||+.
T Consensus       622 HPGiV~le~M~ET~ervFVVMEKl~GDMLEMILSsEkgRL~er~TkFlvtQIL~ALr~LH~k---nIvHCDLKPENVLLa  698 (888)
T KOG4236|consen  622 HPGIVNLECMFETPERVFVVMEKLHGDMLEMILSSEKGRLPERITKFLVTQILVALRYLHFK---NIVHCDLKPENVLLA  698 (888)
T ss_pred             CCCeeEEEEeecCCceEEEEehhhcchHHHHHHHhhcccchHHHHHHHHHHHHHHHHHhhhc---ceeeccCCchheeec
Confidence            88988765554445679999999987666555455555556665677789999999999998   899999999999996


Q ss_pred             CCC---CCeEeeeeceEEeCCCCcceeceeeecccccCchhHHH------HHHHhcCCCcceee-cccccCCCC------
Q 045577          265 AEI---NPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELLQ------AWKLWSEGDPMEII-DEQTKMKGP------  328 (392)
Q Consensus       265 ~~~---~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~~------~~diws~G~v~~~l-d~~~~~~~~------  328 (392)
                      ...   .+||+|||.|+++++..  ....++||+.|+| ||++.      ..|+|+.|.+++.- .+..++..+      
T Consensus       699 s~~~FPQvKlCDFGfARiIgEks--FRrsVVGTPAYLa-PEVLrnkGyNrSLDMWSVGVIiYVsLSGTFPFNEdEdIndQ  775 (888)
T KOG4236|consen  699 SASPFPQVKLCDFGFARIIGEKS--FRRSVVGTPAYLA-PEVLRNKGYNRSLDMWSVGVIIYVSLSGTFPFNEDEDINDQ  775 (888)
T ss_pred             cCCCCCceeeccccceeecchhh--hhhhhcCCccccC-HHHHhhccccccccceeeeEEEEEEecccccCCCccchhHH
Confidence            542   47999999999987432  2334799999999 88775      45999999987542 221111111      


Q ss_pred             ----------CC-HHHHHHHHHHHHhhcccCcCCCCCHHHHH
Q 045577          329 ----------FS-ADELVKCIEVGLLCVQQRIEDWPTMSSVL  359 (392)
Q Consensus       329 ----------~~-~~~~~~~~~i~~~Cl~~dp~~RPsm~eVv  359 (392)
                                .+ .+.....++++...+|..-.+|-++.+-+
T Consensus       776 IQNAaFMyPp~PW~eis~~AidlIn~LLqVkm~kRysvdk~l  817 (888)
T KOG4236|consen  776 IQNAAFMYPPNPWSEISPEAIDLINNLLQVKMRKRYSVDKSL  817 (888)
T ss_pred             hhccccccCCCchhhcCHHHHHHHHHHHHHHHHHhcchHhhc
Confidence                      11 11223556677777777777777766543

>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=99.63  E-value=1.2e-16  Score=146.27  Aligned_cols=131  Identities=20%  Similarity=0.239  Sum_probs=104.3

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEc
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLD  264 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~  264 (392)
                      |.|.+...+++.++...|+|||.|.+|.+...+.++.|....+ +..+..+||.||.|||.+   +|.|||+||+|||-.
T Consensus       135 h~nilqLiefFEdd~~FYLVfEKm~GGplLshI~~~~~F~E~E-As~vvkdia~aLdFlH~k---gIAHRDlKPENiLC~  210 (463)
T KOG0607|consen  135 HKNILQLIEFFEDDTRFYLVFEKMRGGPLLSHIQKRKHFNERE-ASRVVKDIASALDFLHTK---GIAHRDLKPENILCE  210 (463)
T ss_pred             CccHHHHHHHhcccceEEEEEecccCchHHHHHHHhhhccHHH-HHHHHHHHHHHHHHHhhc---CcccccCCccceeec
Confidence            7888888888887889999999999999988888887766544 678999999999999999   999999999999996


Q ss_pred             CCCC---CeEeeeeceEEeC--CCC----cceeceeeecccccCchhHH-----------HHHHHhcCCCcceeec
Q 045577          265 AEIN---PNISDFGPARIFG--DQT----EEVTGRVIGTQTLKTVPELL-----------QAWKLWSEGDPMEIID  320 (392)
Q Consensus       265 ~~~~---~kl~DFGla~~~~--~~~----~~~~~~~~gt~~y~a~~~~~-----------~~~diws~G~v~~~ld  320 (392)
                      ....   +||+||.+..-+.  ..-    .....+.+|+..||| ||+.           ..+|+||+|.+++++-
T Consensus       211 ~pn~vsPvKiCDfDLgSg~k~~~~~spastP~L~tPvGSAEfMA-PEVVd~fv~qA~~YDKrCDlwSLGvIlYImL  285 (463)
T KOG0607|consen  211 SPNKVSPVKICDFDLGSGIKLNNDCSPASTPELLTPVGSAEFMA-PEVVDVFVDQATFYDKRCDLWSLGVILYIML  285 (463)
T ss_pred             CCCCcCceeeeccccccccccCCCCCCCCCccccCcccchhhcc-hhHHhhhccccccccccccHHHHHHHHHHHH
Confidence            6544   6999998875433  111    112223689999999 6654           3679999999986554

>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases

Probab=99.63  E-value=4.9e-16  Score=142.86  Aligned_cols=167  Identities=19%  Similarity=0.128  Sum_probs=120.0

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEc
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLD  264 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~  264 (392)
                      |++..........+...|++|||++++++......... .....+..++.|++.||.|||+.   +++|+||+|.||+++
T Consensus        52 h~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~-l~~~~~~~~~~qi~~~l~~lh~~---~~~H~~l~p~ni~~~  127 (250)
T cd05123          52 HPFIVKLHYAFQTEEKLYLVLEYAPGGELFSHLSKEGR-FSEERARFYAAEIVLALEYLHSL---GIIYRDLKPENILLD  127 (250)
T ss_pred             CCcHHHHHHHeecCCeeEEEEecCCCCcHHHHHHhcCC-CCHHHHHHHHHHHHHHHHHHHHC---CceecCCCcceEEEc
Confidence            44555444444445678999999998888765544433 34555788999999999999997   899999999999999


Q ss_pred             CCCCCeEeeeeceEEeCCCCcceeceeeecccccCchhHH------HHHHHhcCCCcc-eeecccccCCCCC--------
Q 045577          265 AEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIIDEQTKMKGPF--------  329 (392)
Q Consensus       265 ~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld~~~~~~~~~--------  329 (392)
                      .++.++|+|||++....... .......++..|++ ||..      ...|+|+.|+++ +++.+...+....        
T Consensus       128 ~~~~~~l~d~~~~~~~~~~~-~~~~~~~~~~~~~~-Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~~~~~~  205 (250)
T cd05123         128 ADGHIKLTDFGLAKELSSEG-SRTNTFCGTPEYLA-PEVLLGKGYGKAVDWWSLGVLLYEMLTGKPPFYAEDRKEIYEKI  205 (250)
T ss_pred             CCCcEEEeecCcceecccCC-CcccCCcCCccccC-hHHhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH
Confidence            99999999999988754321 12233567888988 6654      368999999875 4555433322111        


Q ss_pred             -------CHHHHHHHHHHHHhhcccCcCCCCCHHH
Q 045577          330 -------SADELVKCIEVGLLCVQQRIEDWPTMSS  357 (392)
Q Consensus       330 -------~~~~~~~~~~i~~~Cl~~dp~~RPsm~e  357 (392)
                             +......+.+++..|++.+|++||++.+
T Consensus       206 ~~~~~~~~~~~~~~l~~~i~~~l~~~p~~R~~~~~  240 (250)
T cd05123         206 LKDPLRFPEFLSPEARDLISGLLQKDPTKRLGSGG  240 (250)
T ss_pred             hcCCCCCCCCCCHHHHHHHHHHhcCCHhhCCCccc
Confidence                   1111235677888999999999999954

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the

>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6

Probab=99.63  E-value=4.9e-16  Score=150.53  Aligned_cols=156  Identities=20%  Similarity=0.315  Sum_probs=109.5

Q ss_pred             CCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEcC-CCCCeEeeeece
Q 045577          199 GEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDA-EINPNISDFGPA  277 (392)
Q Consensus       199 ~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~~-~~~~kl~DFGla  277 (392)
                      ...|++|||++. ++.....+  .......+..++.|++.||.|||+.   +++||||||+||+++. +..+|++|||++
T Consensus        89 ~~~~lv~e~~~~-~L~~~~~~--~~l~~~~~~~~~~qi~~aL~~LH~~---givH~dikp~Nili~~~~~~~kl~dfg~~  162 (342)
T cd07854          89 NSVYIVQEYMET-DLANVLEQ--GPLSEEHARLFMYQLLRGLKYIHSA---NVLHRDLKPANVFINTEDLVLKIGDFGLA  162 (342)
T ss_pred             ceEEEEeecccc-cHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEcCCCceEEECCcccc
Confidence            468999999984 55433322  2234556788999999999999998   8999999999999974 557899999999


Q ss_pred             EEeCCCC--cceeceeeecccccCchhHH-------HHHHHhcCCCcc-eeecccccCCCCCCHH---------------
Q 045577          278 RIFGDQT--EEVTGRVIGTQTLKTVPELL-------QAWKLWSEGDPM-EIIDEQTKMKGPFSAD---------------  332 (392)
Q Consensus       278 ~~~~~~~--~~~~~~~~gt~~y~a~~~~~-------~~~diws~G~v~-~~ld~~~~~~~~~~~~---------------  332 (392)
                      +......  ........++..|+| ||..       .+.|+|+.|+++ +++.++..+....+.+               
T Consensus       163 ~~~~~~~~~~~~~~~~~~~~~y~a-PE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~  241 (342)
T cd07854         163 RIVDPHYSHKGYLSEGLVTKWYRS-PRLLLSPNNYTKAIDMWAAGCIFAEMLTGKPLFAGAHELEQMQLILESVPVVREE  241 (342)
T ss_pred             eecCCccccccccccccccccccC-HHHHhCccccCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChH
Confidence            8654211  111122357788999 6643       257999999876 4544433332111000               


Q ss_pred             ------------------------------HHHHHHHHHHhhcccCcCCCCCHHHHHHH
Q 045577          333 ------------------------------ELVKCIEVGLLCVQQRIEDWPTMSSVLTM  361 (392)
Q Consensus       333 ------------------------------~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~  361 (392)
                                                    ....+.+++..|++.+|++||++.++++.
T Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h  300 (342)
T cd07854         242 DRNELLNVIPSFVRNDGGEPRRPLRDLLPGVNPEALDFLEQILTFNPMDRLTAEEALMH  300 (342)
T ss_pred             HhhhhhhhhhhhhhhcccccCCCHHHHccCCCHHHHHHHHHHhCCCchhccCHHHHhCC
Confidence                                          11245578889999999999999999853

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi

>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]

Probab=99.62  E-value=1.7e-15  Score=145.11  Aligned_cols=212  Identities=22%  Similarity=0.272  Sum_probs=139.0

Q ss_pred             cCCcccceecccCCCCCceEEE---Ee-CCcceEee----e--cCC-CCCccccccCcCC----CCCeeEEecCccCCCc
Q 045577          149 TGWNQNIKAWNLEKSDTPQLVL---WR-RTEKVFRS----W--NGI-SGGCKRNWEADCG----DGEVFLMFEGIKLPDK  213 (392)
Q Consensus       149 tg~~~~l~s~kld~~g~~~l~~---~~-~~~~~w~~----W--~g~-s~GCvR~~~l~C~----~~~~~lv~e~~~~~~l  213 (392)
                      .|..++...||....+  +.+.   |. ....+|..    .  .+. |.+.++-....-.    .-+..+|+||-+.|.|
T Consensus       218 i~~Grfg~V~KaqL~~--~~VAVKifp~~~kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~~~eywLVt~fh~kGsL  295 (534)
T KOG3653|consen  218 IGRGRFGCVWKAQLDN--RLVAVKIFPEQEKQSFQNEKNIYSLPGMKHENILQFIGAEKRGTADRMEYWLVTEFHPKGSL  295 (534)
T ss_pred             hhcCccceeehhhccC--ceeEEEecCHHHHHHHHhHHHHHhccCccchhHHHhhchhccCCccccceeEEeeeccCCcH
Confidence            4566778888854443  2332   22 12234432    1  111 6666665443322    2378999999999999


Q ss_pred             ChhhhhhhccccchhhhhHHHHHHHhhhhcCcC------CCCceeecccccceeEEcCCCCCeEeeeeceEEeCC-CCcc
Q 045577          214 SEFTCEFECSKYSSYVTNILYGIARVILYLPED------SRLEIIHRDHKTSNVLLDAEINPNISDFGPARIFGD-QTEE  286 (392)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~------~~~~iiHrDlKp~NIll~~~~~~kl~DFGla~~~~~-~~~~  286 (392)
                      .++....  ...+....+|+.-+++||+|||++      ++++|+|||||+.|||+..++.+.|+|||+|..+.. ....
T Consensus       296 ~dyL~~n--tisw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~DlTccIaDFGLAl~~~p~~~~~  373 (534)
T KOG3653|consen  296 CDYLKAN--TISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKNDLTCCIADFGLALRLEPGKPQG  373 (534)
T ss_pred             HHHHHhc--cccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEccCCcEEeeccceeEEecCCCCCc
Confidence            7755443  224444678999999999999975      467999999999999999999999999999998762 2222


Q ss_pred             eeceeeecccccCchhHHH------------HHHHhcCCCcc-ee------ec--ccccCCCCC--------CHHHH---
Q 045577          287 VTGRVIGTQTLKTVPELLQ------------AWKLWSEGDPM-EI------ID--EQTKMKGPF--------SADEL---  334 (392)
Q Consensus       287 ~~~~~~gt~~y~a~~~~~~------------~~diws~G~v~-~~------ld--~~~~~~~~~--------~~~~~---  334 (392)
                      .+...+||..||| ||++.            ..|+++.|-++ |+      ++  +.+.+..++        ..+++   
T Consensus       374 d~~~qVGT~RYMA-PEvLEgainl~d~~Afkr~DvYamgLVLWEi~SRC~~~~~~~vp~Yqlpfe~evG~hPt~e~mq~~  452 (534)
T KOG3653|consen  374 DTHGQVGTRRYMA-PEVLEGAINLQDRDAFKRIDVYAMGLVLWEIASRCTDADPGPVPEYQLPFEAEVGNHPTLEEMQEL  452 (534)
T ss_pred             chhhhhhhhhhcC-HHHHhhhcccccHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCcccCchhHHhcCCCCHHHHHHH
Confidence            3333789999999 77664            45788877655 21      11  101111111        11222   


Q ss_pred             --------------------HHHHHHHHhhcccCcCCCCCHHHHHHHHccC
Q 045577          335 --------------------VKCIEVGLLCVQQRIEDWPTMSSVLTMLSNE  365 (392)
Q Consensus       335 --------------------~~~~~i~~~Cl~~dp~~RPsm~eVv~~L~~~  365 (392)
                                          .-+.+.+-.||..||+.|-|..=|.+.+...
T Consensus       453 VV~kK~RP~~p~~W~~h~~~~~l~et~EeCWDhDaeARLTA~Cv~eR~~~l  503 (534)
T KOG3653|consen  453 VVRKKQRPKIPDAWRKHAGMAVLCETIEECWDHDAEARLTAGCVEERMAEL  503 (534)
T ss_pred             HHhhccCCCChhhhhcCccHHHHHHHHHHHcCCchhhhhhhHHHHHHHHHH
Confidence                                2344566799999999999988887777655

>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain

Probab=99.62  E-value=5.8e-16  Score=140.70  Aligned_cols=169  Identities=21%  Similarity=0.238  Sum_probs=121.9

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEc
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLD  264 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~  264 (392)
                      +++.++.......+...++++|+++++++......... .....+..++.+++.++.|||+.   +++|+||+|.||+++
T Consensus        46 ~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~~~~~~~-~~~~~~~~~~~~l~~~l~~lh~~---~i~h~~i~~~ni~~~  121 (244)
T smart00220       46 HPNIVRLYDVFEDEDKLYLVMEYCDGGDLFDLLKKRGR-LSEDEARFYARQILSALEYLHSN---GIIHRDLKPENILLD  121 (244)
T ss_pred             CCcHHHHHhheeeCCEEEEEEeCCCCCCHHHHHHhccC-CCHHHHHHHHHHHHHHHHHHHHc---CeecCCcCHHHeEEC
Confidence            44444444444444678999999999888765443221 34445788999999999999998   899999999999999


Q ss_pred             CCCCCeEeeeeceEEeCCCCcceeceeeecccccCchhHH------HHHHHhcCCCcc-eeecccccCCCCCCHH-----
Q 045577          265 AEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIIDEQTKMKGPFSAD-----  332 (392)
Q Consensus       265 ~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld~~~~~~~~~~~~-----  332 (392)
                      .++.++++|||.+.......  ......++..|++ ||..      .+.|+|+.|.++ +++.+...+......+     
T Consensus       122 ~~~~~~l~d~~~~~~~~~~~--~~~~~~~~~~~~~-pE~~~~~~~~~~~Di~slG~~l~~l~~~~~p~~~~~~~~~~~~~  198 (244)
T smart00220      122 EDGHVKLADFGLARQLDPGG--LLTTFVGTPEYMA-PEVLLGKGYGKAVDVWSLGVILYELLTGKPPFPGDDQLLELFKK  198 (244)
T ss_pred             CCCcEEEccccceeeecccc--ccccccCCcCCCC-HHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHH
Confidence            99999999999998765322  2233567888988 6654      368999999765 4444322222101110     


Q ss_pred             --------------HHHHHHHHHHhhcccCcCCCCCHHHHHH
Q 045577          333 --------------ELVKCIEVGLLCVQQRIEDWPTMSSVLT  360 (392)
Q Consensus       333 --------------~~~~~~~i~~~Cl~~dp~~RPsm~eVv~  360 (392)
                                    ....+.+++.+|+..+|++||++.++++
T Consensus       199 ~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~~~  240 (244)
T smart00220      199 IGKPKPPFPPPEWKISPEAKDLIRKLLVKDPEKRLTAEEALQ  240 (244)
T ss_pred             HhccCCCCccccccCCHHHHHHHHHHccCCchhccCHHHHhh
Confidence                          2346778889999999999999999986

Phosphotransferases. Serine or threonine-specific kinase subfamily.

>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]

Probab=99.62  E-value=3e-16  Score=135.73  Aligned_cols=119  Identities=22%  Similarity=0.292  Sum_probs=87.5

Q ss_pred             CCCeeEEecCccCCCcCh--hhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEcCCCCCeEeeee
Q 045577          198 DGEVFLMFEGIKLPDKSE--FTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEINPNISDFG  275 (392)
Q Consensus       198 ~~~~~lv~e~~~~~~l~~--~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~~~~~~kl~DFG  275 (392)
                      ++++.+-||.|+...-..  ..-.+....++..+-+|+..+.+||.|||++-  .+||||+||+|||++.+|.+|++|||
T Consensus       117 egdvwIcME~M~tSldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~~kL--~vIHRDvKPsNiLIn~~GqVKiCDFG  194 (282)
T KOG0984|consen  117 EGDVWICMELMDTSLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLHSKL--SVIHRDVKPSNILINYDGQVKICDFG  194 (282)
T ss_pred             cccEEEeHHHhhhhHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHHHHh--hhhhccCCcceEEEccCCcEEEcccc
Confidence            488999999997532211  11112222256657789999999999999875  79999999999999999999999999


Q ss_pred             ceEEeCCCCcceeceeeecccccCchhHH----------HHHHHhcCCCcc-eeecc
Q 045577          276 PARIFGDQTEEVTGRVIGTQTLKTVPELL----------QAWKLWSEGDPM-EIIDE  321 (392)
Q Consensus       276 la~~~~~~~~~~~~~~~gt~~y~a~~~~~----------~~~diws~G~v~-~~ld~  321 (392)
                      .+..+.+.  ...+...|+..||| ||..          -..|+||+|..+ |+...
T Consensus       195 IsG~L~dS--iAkt~daGCkpYma-PEri~~e~n~~gY~vksDvWSLGItmiElA~l  248 (282)
T KOG0984|consen  195 ISGYLVDS--IAKTMDAGCKPYMA-PERINPELNQKGYSVKSDVWSLGITMIEMAIL  248 (282)
T ss_pred             cceeehhh--hHHHHhcCCCccCC-hhhcCcccCcccceeehhhhhhhhhhhhhhhc
Confidence            99887532  22233578899999 5543          267999999744 55554

>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1

Probab=99.61  E-value=5.1e-16  Score=149.64  Aligned_cols=166  Identities=19%  Similarity=0.267  Sum_probs=115.3

Q ss_pred             CCCccccccCcCC-CCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEE
Q 045577          185 SGGCKRNWEADCG-DGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLL  263 (392)
Q Consensus       185 s~GCvR~~~l~C~-~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll  263 (392)
                      |+++++.....+. +...++++||+. +++......  .......+..++.|++.||.|||+.   +++||||||.||++
T Consensus        68 hpniv~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~--~~~~~~~~~~~~~ql~~aL~~LH~~---~iiH~dl~p~Nili  141 (328)
T cd07856          68 HENIISLSDIFISPLEDIYFVTELLG-TDLHRLLTS--RPLEKQFIQYFLYQILRGLKYVHSA---GVVHRDLKPSNILI  141 (328)
T ss_pred             CCCeeeEeeeEecCCCcEEEEeehhc-cCHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEeE
Confidence            5566665554433 456899999985 455433222  1223344667899999999999998   89999999999999


Q ss_pred             cCCCCCeEeeeeceEEeCCCCcceeceeeecccccCchhH-------HHHHHHhcCCCcc-eeecccccCCCCCC-----
Q 045577          264 DAEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPEL-------LQAWKLWSEGDPM-EIIDEQTKMKGPFS-----  330 (392)
Q Consensus       264 ~~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~-------~~~~diws~G~v~-~~ld~~~~~~~~~~-----  330 (392)
                      +.++.+||+|||++......    .....++..|++ ||.       ....|+|+.|+++ +++.+.+.+.....     
T Consensus       142 ~~~~~~~l~dfg~~~~~~~~----~~~~~~~~~y~a-PE~~~~~~~~~~~~Dv~slG~il~el~tg~~~f~~~~~~~~~~  216 (328)
T cd07856         142 NENCDLKICDFGLARIQDPQ----MTGYVSTRYYRA-PEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVNQFS  216 (328)
T ss_pred             CCCCCEEeCccccccccCCC----cCCCcccccccC-ceeeeccCCcCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHH
Confidence            99999999999998754321    112346777888 553       2368999999876 45554333321110     


Q ss_pred             ------------------------------------H-----HHHHHHHHHHHhhcccCcCCCCCHHHHHHH
Q 045577          331 ------------------------------------A-----DELVKCIEVGLLCVQQRIEDWPTMSSVLTM  361 (392)
Q Consensus       331 ------------------------------------~-----~~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~  361 (392)
                                                          .     .....+.+++..|++.+|++||++.+++..
T Consensus       217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~ell~~  288 (328)
T cd07856         217 IITDLLGTPPDDVINTICSENTLRFVQSLPKREPVPFSEKFKNADPSAIDLLEKMLVFDPQKRISAAEALAH  288 (328)
T ss_pred             HHHHHhCCCCHHHHHhccchhhHHHHhhccccCCCcHHHHcCCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence                                                0     012356778889999999999999998766

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U

>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]

Probab=99.61  E-value=7.8e-16  Score=146.21  Aligned_cols=173  Identities=20%  Similarity=0.223  Sum_probs=121.7

Q ss_pred             CCCccccccCcC-CCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEE
Q 045577          185 SGGCKRNWEADC-GDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLL  263 (392)
Q Consensus       185 s~GCvR~~~l~C-~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll  263 (392)
                      |+-.|...++.. +....+-|+|||++.||+.+..+..- ..+..+..|+.||..||.||.+ .+++|||-||||.||||
T Consensus       526 HpRIVKlYDyfslDtdsFCTVLEYceGNDLDFYLKQhkl-mSEKEARSIiMQiVnAL~YLNE-ikpPIIHYDLKPgNILL  603 (775)
T KOG1151|consen  526 HPRIVKLYDYFSLDTDSFCTVLEYCEGNDLDFYLKQHKL-MSEKEARSIIMQIVNALKYLNE-IKPPIIHYDLKPGNILL  603 (775)
T ss_pred             cceeeeeeeeeeeccccceeeeeecCCCchhHHHHhhhh-hhHHHHHHHHHHHHHHHHHHhc-cCCCeeeeccCCccEEE
Confidence            555555555543 23457789999999999987666543 3455588999999999999988 46689999999999999


Q ss_pred             c---CCCCCeEeeeeceEEeCCCC------cceeceeeecccccC---------chhHHHHHHHhcCCCcce-eeccccc
Q 045577          264 D---AEINPNISDFGPARIFGDQT------EEVTGRVIGTQTLKT---------VPELLQAWKLWSEGDPME-IIDEQTK  324 (392)
Q Consensus       264 ~---~~~~~kl~DFGla~~~~~~~------~~~~~~~~gt~~y~a---------~~~~~~~~diws~G~v~~-~ld~~~~  324 (392)
                      .   ..|.+||.|||+++++..+.      ...+....||++|++         +|.+..++|+|+.|.+++ .+.++.+
T Consensus       604 v~GtacGeIKITDFGLSKIMdddSy~~vdGmeLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGVIFyQClYGrKP  683 (775)
T KOG1151|consen  604 VNGTACGEIKITDFGLSKIMDDDSYNSVDGMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFYQCLYGRKP  683 (775)
T ss_pred             ecCcccceeEeeecchhhhccCCccCcccceeeecccCceeeecCcceeecCCCCCccccceeeEeeehhhhhhhccCCC
Confidence            4   45789999999999986322      234556789999998         344556889999998873 3444333


Q ss_pred             CCCCCCHHHH---------------------HHHHHHHHhhcccCcCCCCCHHHHH
Q 045577          325 MKGPFSADEL---------------------VKCIEVGLLCVQQRIEDWPTMSSVL  359 (392)
Q Consensus       325 ~~~~~~~~~~---------------------~~~~~i~~~Cl~~dp~~RPsm~eVv  359 (392)
                      +........+                     .....++.+|++..-++|-...++.
T Consensus       684 FGhnqsQQdILqeNTIlkAtEVqFP~KPvVsseAkaFIRRCLaYRKeDR~DV~qLA  739 (775)
T KOG1151|consen  684 FGHNQSQQDILQENTILKATEVQFPPKPVVSSEAKAFIRRCLAYRKEDRIDVQQLA  739 (775)
T ss_pred             CCCchhHHHHHhhhchhcceeccCCCCCccCHHHHHHHHHHHHhhhhhhhhHHHHc
Confidence            3222111111                     1233466699999888887655443

>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase

Probab=99.60  E-value=1.2e-15  Score=148.08  Aligned_cols=152  Identities=24%  Similarity=0.324  Sum_probs=108.7

Q ss_pred             CCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEcCCCCCeEeeeeceE
Q 045577          199 GEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEINPNISDFGPAR  278 (392)
Q Consensus       199 ~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~~~~~~kl~DFGla~  278 (392)
                      ...|++++++ ++++.......  ...+..+..++.|+++||.|||+.   +++||||||+||+++.++.+||+|||+++
T Consensus        95 ~~~~lv~~~~-~~~L~~~~~~~--~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIll~~~~~~kl~dfg~~~  168 (345)
T cd07877          95 NDVYLVTHLM-GADLNNIVKCQ--KLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR  168 (345)
T ss_pred             ccEEEEehhc-ccCHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCChHHEEEcCCCCEEEecccccc
Confidence            3578888887 45554432221  234445788999999999999998   89999999999999999999999999987


Q ss_pred             EeCCCCcceeceeeecccccCchhHH-------HHHHHhcCCCcc-eeecccccCCCCCCHHH-----------------
Q 045577          279 IFGDQTEEVTGRVIGTQTLKTVPELL-------QAWKLWSEGDPM-EIIDEQTKMKGPFSADE-----------------  333 (392)
Q Consensus       279 ~~~~~~~~~~~~~~gt~~y~a~~~~~-------~~~diws~G~v~-~~ld~~~~~~~~~~~~~-----------------  333 (392)
                      ....    ......++..|+| ||..       .+.|+|+.|+++ +++.+.+.+........                 
T Consensus       169 ~~~~----~~~~~~~~~~y~a-PE~~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~  243 (345)
T cd07877         169 HTDD----EMTGYVATRWYRA-PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLK  243 (345)
T ss_pred             cccc----cccccccCCCccC-HHHHhCccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHh
Confidence            6432    1223467888999 6654       257999999876 55555433322111110                 


Q ss_pred             -----------------------------HHHHHHHHHhhcccCcCCCCCHHHHHHH
Q 045577          334 -----------------------------LVKCIEVGLLCVQQRIEDWPTMSSVLTM  361 (392)
Q Consensus       334 -----------------------------~~~~~~i~~~Cl~~dp~~RPsm~eVv~~  361 (392)
                                                   ...+.+++..|++.+|++||++.++++.
T Consensus       244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h  300 (345)
T cd07877         244 KISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH  300 (345)
T ss_pred             hcccHhHHHHHHHhcccCCcchhhhcCCCCHHHHHHHHHHcCCChhhcCCHHHHhcC
Confidence                                         1234578889999999999999988865

Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14

>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=99.60  E-value=2.4e-16  Score=155.23  Aligned_cols=136  Identities=21%  Similarity=0.280  Sum_probs=99.0

Q ss_pred             ccccccCcCCCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEcCCC
Q 045577          188 CKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEI  267 (392)
Q Consensus       188 CvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~~~~  267 (392)
                      .||+.=.+-+...+|+||+|+++||+....-+... ..+..+..++.++.+|+++.|..   +.|||||||.|||||.+|
T Consensus       691 VVrLyySFQDkdnLYFVMdYIPGGDmMSLLIrmgI-FeE~LARFYIAEltcAiesVHkm---GFIHRDiKPDNILIDrdG  766 (1034)
T KOG0608|consen  691 VVRLYYSFQDKDNLYFVMDYIPGGDMMSLLIRMGI-FEEDLARFYIAELTCAIESVHKM---GFIHRDIKPDNILIDRDG  766 (1034)
T ss_pred             eEEEEEEeccCCceEEEEeccCCccHHHHHHHhcc-CHHHHHHHHHHHHHHHHHHHHhc---cceecccCccceEEccCC
Confidence            34443333345679999999999998775544321 23344567788999999999998   999999999999999999


Q ss_pred             CCeEeeeeceEEeC---C------CC--------------------------------cceeceeeecccccCchhHH--
Q 045577          268 NPNISDFGPARIFG---D------QT--------------------------------EEVTGRVIGTQTLKTVPELL--  304 (392)
Q Consensus       268 ~~kl~DFGla~~~~---~------~~--------------------------------~~~~~~~~gt~~y~a~~~~~--  304 (392)
                      ++||.||||+.-+.   +      ..                                .......+||+.|+| ||++  
T Consensus       767 HIKLTDFGLCTGfRWTHdskYYq~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyia-pevl~r  845 (1034)
T KOG0608|consen  767 HIKLTDFGLCTGFRWTHDSKYYQEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIA-PEVLAR  845 (1034)
T ss_pred             ceeeeeccccccceeccccccccCCCccccccCCCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccC-hHHhcc
Confidence            99999999986432   0      00                                001122579999999 7766  


Q ss_pred             ----HHHHHhcCCCcc-eeecccccCCCC
Q 045577          305 ----QAWKLWSEGDPM-EIIDEQTKMKGP  328 (392)
Q Consensus       305 ----~~~diws~G~v~-~~ld~~~~~~~~  328 (392)
                          +.+|.|+.|.++ +|+-+++.+..+
T Consensus       846 ~g~~q~cdwws~gvil~em~~g~~pf~~~  874 (1034)
T KOG0608|consen  846 TGYTQLCDWWSVGVILYEMLVGQPPFLAD  874 (1034)
T ss_pred             cCccccchhhHhhHHHHHHhhCCCCccCC
Confidence                368999999887 666665555443

>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.60  E-value=1.1e-16  Score=143.61  Aligned_cols=151  Identities=24%  Similarity=0.356  Sum_probs=106.9

Q ss_pred             CeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEcCCCCCeEeeeeceEE
Q 045577          200 EVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEINPNISDFGPARI  279 (392)
Q Consensus       200 ~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~~~~~~kl~DFGla~~  279 (392)
                      ++|.+.|.|.- |+...+.... ......+.-++.||.+||.|||+.   +|+||||||.|.|++.+-..||+|||+++.
T Consensus       131 EiYV~TELmQS-DLHKIIVSPQ-~Ls~DHvKVFlYQILRGLKYLHsA---~ILHRDIKPGNLLVNSNCvLKICDFGLARv  205 (449)
T KOG0664|consen  131 ELYVLTELMQS-DLHKIIVSPQ-ALTPDHVKVFVYQILRGLKYLHTA---NILHRDIKPGNLLVNSNCILKICDFGLART  205 (449)
T ss_pred             HHHHHHHHHHh-hhhheeccCC-CCCcchhhhhHHHHHhhhHHHhhc---chhhccCCCccEEeccCceEEecccccccc
Confidence            56677777662 3333222211 123444667889999999999998   999999999999999999999999999998


Q ss_pred             eCCCCcceeceeeecccccCchhHHH-------HHHHhcCCCcc-eeecccccCCCCCCHHHHHHHHHHHHhhcccCcCC
Q 045577          280 FGDQTEEVTGRVIGTQTLKTVPELLQ-------AWKLWSEGDPM-EIIDEQTKMKGPFSADELVKCIEVGLLCVQQRIED  351 (392)
Q Consensus       280 ~~~~~~~~~~~~~gt~~y~a~~~~~~-------~~diws~G~v~-~~ld~~~~~~~~~~~~~~~~~~~i~~~Cl~~dp~~  351 (392)
                      .........+..+-|..|.| ||++-       +.|+||.||++ |++..+..+....+.++++.++++.         -
T Consensus       206 ee~d~~~hMTqEVVTQYYRA-PEiLMGaRhYs~AvDiWSVGCIFaELLgRrILFQAq~PiqQL~lItdLL---------G  275 (449)
T KOG0664|consen  206 WDQRDRLNMTHEVVTQYYRA-PELLMGARRYTGAVDIWSVGCIFAELLQRKILFQAAGPIEQLQMIIDLL---------G  275 (449)
T ss_pred             cchhhhhhhHHHHHHHHhcc-HHHhhcchhhcCccceehhhHHHHHHHhhhhhhhccChHHHHHHHHHHh---------C
Confidence            65333333333456788888 77663       67999999998 5555544555556667776666632         2


Q ss_pred             CCCHHHHHHHHccC
Q 045577          352 WPTMSSVLTMLSNE  365 (392)
Q Consensus       352 RPsm~eVv~~L~~~  365 (392)
                      -|+|+.....-|+.
T Consensus       276 TPs~EaMr~ACEGA  289 (449)
T KOG0664|consen  276 TPSQEAMKYACEGA  289 (449)
T ss_pred             CCcHHHHHHHhhhh
Confidence            48888877766664

>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]

Probab=99.60  E-value=5e-16  Score=154.53  Aligned_cols=171  Identities=21%  Similarity=0.248  Sum_probs=119.9

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhh-hhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEE
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCE-FECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLL  263 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~-~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll  263 (392)
                      |+.-+|...+.- +....+|+|.+.+|.|.+...+ .........+-.++.|||.||.||..+   ++|||||...|+|+
T Consensus       170 H~hliRLyGvVl-~qp~mMV~ELaplGSLldrLrka~~~~llv~~Lcdya~QiA~aM~YLesk---rlvHRDLAARNlll  245 (1039)
T KOG0199|consen  170 HPHLIRLYGVVL-DQPAMMVFELAPLGSLLDRLRKAKKAILLVSRLCDYAMQIAKAMQYLESK---RLVHRDLAARNLLL  245 (1039)
T ss_pred             CcceeEEeeeec-cchhhHHhhhcccchHHHHHhhccccceeHHHHHHHHHHHHHHHHHHhhh---hhhhhhhhhhhhee
Confidence            334444433332 2567899999999999775544 222223333567899999999999887   89999999999999


Q ss_pred             cCCCCCeEeeeeceEEeCCCCcce--eceeeecccccCchhHH------HHHHHhcCCCcc-------------------
Q 045577          264 DAEINPNISDFGPARIFGDQTEEV--TGRVIGTQTLKTVPELL------QAWKLWSEGDPM-------------------  316 (392)
Q Consensus       264 ~~~~~~kl~DFGla~~~~~~~~~~--~~~~~gt~~y~a~~~~~------~~~diws~G~v~-------------------  316 (392)
                      ...-.+||+|||+.+.++......  .....-.+.|.| ||-+      .+.|+|..|..+                   
T Consensus       246 asprtVKI~DFGLmRaLg~ned~Yvm~p~rkvPfAWCa-PEsLrh~kFShaSDvWmyGVTiWEMFtyGEePW~G~~g~qI  324 (1039)
T KOG0199|consen  246 ASPRTVKICDFGLMRALGENEDMYVMAPQRKVPFAWCA-PESLRHRKFSHASDVWMYGVTIWEMFTYGEEPWVGCRGIQI  324 (1039)
T ss_pred             cccceeeeecccceeccCCCCcceEecCCCcCcccccC-HhHhccccccccchhhhhhhhHHhhhccCCCCCCCCCHHHH
Confidence            998899999999999887322222  112223456677 6544      477888888644                   


Q ss_pred             -eeecccccCCCCCCHHHHHHHHHHHHhhcccCcCCCCCHHHHHHHH
Q 045577          317 -EIIDEQTKMKGPFSADELVKCIEVGLLCVQQRIEDWPTMSSVLTML  362 (392)
Q Consensus       317 -~~ld~~~~~~~~~~~~~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~L  362 (392)
                       +.+|.+.++.  .+..+.+.+.+++..||..+|.+||++..|.+.+
T Consensus       325 L~~iD~~erLp--RPk~csedIY~imk~cWah~paDRptFsair~~~  369 (1039)
T KOG0199|consen  325 LKNIDAGERLP--RPKYCSEDIYQIMKNCWAHNPADRPTFSAIREDL  369 (1039)
T ss_pred             HHhccccccCC--CCCCChHHHHHHHHHhccCCccccccHHHHHHhH
Confidence             3344322222  3445677888999999999999999999997543

>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]

Probab=99.59  E-value=1.7e-16  Score=142.06  Aligned_cols=207  Identities=17%  Similarity=0.225  Sum_probs=129.3

Q ss_pred             CCcccceecccCCCCCceEEEEeCC--cc------eEee-ecC--CCCCcccccc---CcCCCCCeeEEecCccCCCcCh
Q 045577          150 GWNQNIKAWNLEKSDTPQLVLWRRT--EK------VFRS-WNG--ISGGCKRNWE---ADCGDGEVFLMFEGIKLPDKSE  215 (392)
Q Consensus       150 g~~~~l~s~kld~~g~~~l~~~~~~--~~------~w~~-W~g--~s~GCvR~~~---l~C~~~~~~lv~e~~~~~~l~~  215 (392)
                      |...+.+..|+.+....++...++-  ..      -+.. ...  .+.+|....+   ..-++|+.++-||.|+...-..
T Consensus        73 G~G~fG~V~KM~hk~sg~~mAVKrIr~~n~~keq~rll~e~d~~mks~~cp~IVkfyGa~F~EGdcWiCMELMd~SlDkl  152 (361)
T KOG1006|consen   73 GNGAFGTVNKMLHKPSGKLMAVKRIRSNNIEKEQKRLLMEHDTVMKSSNCPNIVKFYGALFSEGDCWICMELMDISLDKL  152 (361)
T ss_pred             cCCcchhhhhhhcCccCcEEEEEEeeeccchHHHHHHHHHHHHHHhhcCCcHHHHHhhhhhcCCceeeeHHHHhhhHHHH
Confidence            4556777777777766666543320  00      0000 000  0445544333   2234689999999997532111


Q ss_pred             h--hh-hhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEcCCCCCeEeeeeceEEeCCCCcceeceee
Q 045577          216 F--TC-EFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEINPNISDFGPARIFGDQTEEVTGRVI  292 (392)
Q Consensus       216 ~--~~-~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~~~~~~~~~  292 (392)
                      +  .. .+.....+..+-+|..-+..||.||.++.  .|||||+||+|||++..|.+|++|||++..+.  .+...+.-.
T Consensus       153 Yk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~~l--kiIHRDvKPSNILldr~G~vKLCDFGIcGqLv--~SiAkT~da  228 (361)
T KOG1006|consen  153 YKRVYSVQKSRIPENILGHITVATVDALDYLKEEL--KIIHRDVKPSNILLDRHGDVKLCDFGICGQLV--DSIAKTVDA  228 (361)
T ss_pred             HHHHHHHHhccCcHhhhhheeeeehhHHHHHHHHh--hhhhccCChhheEEecCCCEeeecccchHhHH--HHHHhhhcc
Confidence            1  11 11112234434555666678999998765  89999999999999999999999999987653  233344568


Q ss_pred             ecccccCchhHH--------HHHHHhcCCCcc-eeecccccCC----------------------CCCCHHHHHHHHHHH
Q 045577          293 GTQTLKTVPELL--------QAWKLWSEGDPM-EIIDEQTKMK----------------------GPFSADELVKCIEVG  341 (392)
Q Consensus       293 gt~~y~a~~~~~--------~~~diws~G~v~-~~ld~~~~~~----------------------~~~~~~~~~~~~~i~  341 (392)
                      |+..||| ||-.        -..|+||+|..+ |+..+..+.+                      .....+....++..+
T Consensus       229 GCrpYmA-PERi~p~~~gyDiRSDvWSLGITL~EvAtG~fPyr~w~svfeql~~Vv~gdpp~l~~~~~~~~~s~~~~~fi  307 (361)
T KOG1006|consen  229 GCRPYMA-PERIDPSDKGYDIRSDVWSLGITLYEVATGNFPYRKWDSVFEQLCQVVIGDPPILLFDKECVHYSFSMVRFI  307 (361)
T ss_pred             CCccccC-hhccCCccCCcchhhhhhhhcceEeeeecCCCCcchHHHHHHHHHHHHcCCCCeecCcccccccCHHHHHHH
Confidence            9999999 5432        367999999866 4444411111                      001112233566777


Q ss_pred             HhhcccCcCCCCCHHHHHHH
Q 045577          342 LLCVQQRIEDWPTMSSVLTM  361 (392)
Q Consensus       342 ~~Cl~~dp~~RPsm~eVv~~  361 (392)
                      -.|+..|..+||...++..+
T Consensus       308 ntCl~Kd~~~Rpky~~Lk~~  327 (361)
T KOG1006|consen  308 NTCLIKDRSDRPKYDDLKKF  327 (361)
T ss_pred             HHHhhcccccCcchhhhhcC
Confidence            79999999999999887654

>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]

Probab=99.59  E-value=5.1e-16  Score=137.99  Aligned_cols=152  Identities=24%  Similarity=0.394  Sum_probs=110.6

Q ss_pred             CCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEcCCCCCeEeeeeceE
Q 045577          199 GEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEINPNISDFGPAR  278 (392)
Q Consensus       199 ~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~~~~~~kl~DFGla~  278 (392)
                      +..|+||++|+...... .-..........+.+++.++..||.|+|..   .|+|||+|++|+||+.++.+||+|||+++
T Consensus        97 ~t~ylVf~~cehDLaGl-Lsn~~vr~sls~Ikk~Mk~Lm~GL~~iHr~---kilHRDmKaaNvLIt~dgilklADFGlar  172 (376)
T KOG0669|consen   97 ATFYLVFDFCEHDLAGL-LSNRKVRFSLSEIKKVMKGLMNGLYYIHRN---KILHRDMKAANVLITKDGILKLADFGLAR  172 (376)
T ss_pred             ceeeeeHHHhhhhHHHH-hcCccccccHHHHHHHHHHHHHHHHHHHHh---hHHhhcccHhhEEEcCCceEEeecccccc
Confidence            46899999998643221 111111122333788999999999999998   89999999999999999999999999998


Q ss_pred             EeCCC---CcceeceeeecccccCchhHH-------HHHHHhcCCCcc-eeecccccCCCCCCHHHHHHHHHHHHhhccc
Q 045577          279 IFGDQ---TEEVTGRVIGTQTLKTVPELL-------QAWKLWSEGDPM-EIIDEQTKMKGPFSADELVKCIEVGLLCVQQ  347 (392)
Q Consensus       279 ~~~~~---~~~~~~~~~gt~~y~a~~~~~-------~~~diws~G~v~-~~ld~~~~~~~~~~~~~~~~~~~i~~~Cl~~  347 (392)
                      .+...   .....+..+-|..|.+ ||.+       ...|+|..||++ ++....+.+.+.....++.   -|-..|-..
T Consensus       173 ~fs~~~n~~kprytnrvvTLwYrp-pEllLG~r~yg~~iDiWgAgCimaeMwtrspimqgnteqqql~---~Is~LcGs~  248 (376)
T KOG0669|consen  173 AFSTSKNVVKPRYTNRVVTLWYRP-PELLLGDREYGPPIDIWGAGCIMAEMWTRSPIMQGNTEQQQLH---LISQLCGSI  248 (376)
T ss_pred             ceecccccCCCCcccceeeeecCC-HHHhhcccccCCcchhHhHHHHHHHHHccCccccCChHHHHHH---HHHHHhccC
Confidence            77521   1122233456888888 6655       367999999988 6777766777765544444   344589999


Q ss_pred             CcCCCCCHHHH
Q 045577          348 RIEDWPTMSSV  358 (392)
Q Consensus       348 dp~~RPsm~eV  358 (392)
                      .|+-+|.+..+
T Consensus       249 tkevWP~~d~l  259 (376)
T KOG0669|consen  249 TKEVWPNVDNL  259 (376)
T ss_pred             CcccCCCcccc
Confidence            99999988654

>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=99.58  E-value=1.8e-15  Score=140.84  Aligned_cols=155  Identities=19%  Similarity=0.234  Sum_probs=105.4

Q ss_pred             CCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEcCCCCCeEeeeeceE
Q 045577          199 GEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEINPNISDFGPAR  278 (392)
Q Consensus       199 ~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~~~~~~kl~DFGla~  278 (392)
                      +..++++||++++++......... .....+.+++.|++.||.|||+.   +++|+||||+||+++.++.++|+|||+++
T Consensus        79 ~~~~~v~e~~~~~~L~~~~~~~~~-l~~~~~~~~~~~i~~al~~LH~~---~i~H~dl~p~ni~i~~~~~~~l~dfg~~~  154 (264)
T cd06653          79 KKLSIFVEYMPGGSIKDQLKAYGA-LTENVTRRYTRQILQGVSYLHSN---MIVHRDIKGANILRDSAGNVKLGDFGASK  154 (264)
T ss_pred             CEEEEEEEeCCCCcHHHHHHHcCC-CCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCCCEEECcccccc
Confidence            357899999998888665433222 23445778999999999999998   89999999999999999999999999997


Q ss_pred             EeCCC--CcceeceeeecccccCchhHH------HHHHHhcCCCcc-eeecccccCCCC-----------------CCHH
Q 045577          279 IFGDQ--TEEVTGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIIDEQTKMKGP-----------------FSAD  332 (392)
Q Consensus       279 ~~~~~--~~~~~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld~~~~~~~~-----------------~~~~  332 (392)
                      .....  .........++..|++ ||..      ...|+|+.|+++ +++.+..++...                 .+..
T Consensus       155 ~~~~~~~~~~~~~~~~~~~~y~a-PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~p~~  233 (264)
T cd06653         155 RIQTICMSGTGIKSVTGTPYWMS-PEVISGEGYGRKADVWSVACTVVEMLTEKPPWAEYEAMAAIFKIATQPTKPMLPDG  233 (264)
T ss_pred             ccccccccCccccccCCcccccC-HhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCccCHHHHHHHHHcCCCCCCCCcc
Confidence            65311  1111123457888999 6654      357999999876 455443333221                 1111


Q ss_pred             HHHHHHHHHHhhcccCcCCCCCHHHHH
Q 045577          333 ELVKCIEVGLLCVQQRIEDWPTMSSVL  359 (392)
Q Consensus       333 ~~~~~~~i~~~Cl~~dp~~RPsm~eVv  359 (392)
                      ....+.+++..|++ +|..||+..+++
T Consensus       234 ~~~~~~~~i~~~l~-~~~~r~~~~~~~  259 (264)
T cd06653         234 VSDACRDFLKQIFV-EEKRRPTAEFLL  259 (264)
T ss_pred             cCHHHHHHHHHHhc-CcccCccHHHHh
Confidence            12234445556666 356777766554

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho

>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]

Probab=99.58  E-value=1e-15  Score=154.72  Aligned_cols=176  Identities=22%  Similarity=0.254  Sum_probs=132.9

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEc
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLD  264 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~  264 (392)
                      |++-+|...+ |......+|.+||++|.|.++...++...-...++.|..|||+||.|||++   +++||||..+|+|+.
T Consensus       757 Hpnl~RLLgv-c~~s~~qlvtq~mP~G~LlDyvr~hr~~igsq~lLnw~~QIAkgM~YLe~q---rlVHrdLaaRNVLVk  832 (1177)
T KOG1025|consen  757 HPNLLRLLGV-CMLSTLQLVTQLMPLGCLLDYVREHRDNIGSQDLLNWCYQIAKGMKYLEEQ---RLVHRDLAARNVLVK  832 (1177)
T ss_pred             CchHHHHhhh-cccchHHHHHHhcccchHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhc---chhhhhhhhhheeec
Confidence            7777777665 445568999999999999887666665555666899999999999999988   899999999999999


Q ss_pred             CCCCCeEeeeeceEEeC-CCCcceeceeeecccccCchhHH------HHHHHhcCCCcc-eeecccccCCCCCCHHHHH-
Q 045577          265 AEINPNISDFGPARIFG-DQTEEVTGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIIDEQTKMKGPFSADELV-  335 (392)
Q Consensus       265 ~~~~~kl~DFGla~~~~-~~~~~~~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld~~~~~~~~~~~~~~~-  335 (392)
                      +-..+||.|||+++.+. +..+.......-.+.||| -|..      ...|+|+.|+.. |++.-+.......+.+++. 
T Consensus       833 sP~hvkitdfgla~ll~~d~~ey~~~~gK~pikwma-le~i~~~~~thqSDVWsfGVtiWElmTFGa~Py~gi~~~eI~d  911 (1177)
T KOG1025|consen  833 SPNHVKITDFGLAKLLAPDEKEYSAPGGKVPIKWMA-LESIRIRKYTHQSDVWSFGVTIWELMTFGAKPYDGIPAEEIPD  911 (1177)
T ss_pred             CCCeEEEEecchhhccCcccccccccccccCcHHHH-HHHhhccCCCchhhhhhhhhhHHHHHhcCCCccCCCCHHHhhH
Confidence            99999999999999887 334444433344556666 3322      477999999854 5554433332333334433 


Q ss_pred             ----------------HHHHHHHhhcccCcCCCCCHHHHHHHHccC
Q 045577          336 ----------------KCIEVGLLCVQQRIEDWPTMSSVLTMLSNE  365 (392)
Q Consensus       336 ----------------~~~~i~~~Cl~~dp~~RPsm~eVv~~L~~~  365 (392)
                                      .+..+++.||..|++.||+++++...+.+.
T Consensus       912 lle~geRLsqPpiCtiDVy~~mvkCwmid~~~rp~fkel~~~fs~~  957 (1177)
T KOG1025|consen  912 LLEKGERLSQPPICTIDVYMVMVKCWMIDADSRPTFKELAEEFSRM  957 (1177)
T ss_pred             HHhccccCCCCCCccHHHHHHHHHHhccCcccCccHHHHHHHHHHH
Confidence                            455578899999999999999999888764

>smart00750 KIND kinase non-catalytic C-lobe domain

Probab=99.57  E-value=3.6e-15  Score=130.14  Aligned_cols=123  Identities=12%  Similarity=0.117  Sum_probs=93.4

Q ss_pred             ccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEcCCCCCeEeeeeceEEeCCCCcceeceeeecccccCchhH
Q 045577          224 KYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPEL  303 (392)
Q Consensus       224 ~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~  303 (392)
                      ..+..+..|+.|++.||.|||+.   +      ||+||+++.++.+|+  ||+++......      ..|++.||| ||+
T Consensus        14 l~~~~~~~i~~qi~~~L~~lH~~---~------kp~Nil~~~~~~~~~--fG~~~~~~~~~------~~g~~~y~a-PE~   75 (176)
T smart00750       14 LNEEEIWAVCLQCLRALRELHRQ---A------KSGNILLTWDGLLKL--DGSVAFKTPEQ------SRVDPYFMA-PEV   75 (176)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhc---C------CcccEeEcCccceee--ccceEeecccc------CCCcccccC-hHH
Confidence            45566899999999999999998   4      999999999999999  99998764321      258899999 776


Q ss_pred             H------HHHHHhcCCCcc-eeecccccCCCCC----------------------CHHHHH---HHHHHHHhhcccCcCC
Q 045577          304 L------QAWKLWSEGDPM-EIIDEQTKMKGPF----------------------SADELV---KCIEVGLLCVQQRIED  351 (392)
Q Consensus       304 ~------~~~diws~G~v~-~~ld~~~~~~~~~----------------------~~~~~~---~~~~i~~~Cl~~dp~~  351 (392)
                      .      .+.|+|+.|+++ +++.++.++....                      ......   .+.+++.+|++.+|++
T Consensus        76 ~~~~~~~~~~DiwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~cl~~~p~~  155 (176)
T smart00750       76 IQGQSYTEKADIYSLGITLYEALDYELPYNEERELSAILEILLNGMPADDPRDRSNLESVSAARSFADFMRVCASRLPQR  155 (176)
T ss_pred             hcCCCCcchhhHHHHHHHHHHHHhCCCCccccchhcHHHHHHHHHhccCCccccccHHHHHhhhhHHHHHHHHHhccccc
Confidence            5      468999999876 4554433322110                      011111   4778889999999999


Q ss_pred             CCCHHHHHHHHcc
Q 045577          352 WPTMSSVLTMLSN  364 (392)
Q Consensus       352 RPsm~eVv~~L~~  364 (392)
                      ||++.++++.+..
T Consensus       156 Rp~~~~ll~~~~~  168 (176)
T smart00750      156 REAANHYLAHCRA  168 (176)
T ss_pred             ccCHHHHHHHHHH
Confidence            9999999998754

It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features

>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]

Probab=99.57  E-value=1.1e-15  Score=140.06  Aligned_cols=125  Identities=25%  Similarity=0.291  Sum_probs=90.2

Q ss_pred             ecCCCCCccccccCcC------CCCCeeEEecCccCCCcChhhhhhhccc-cchhhhhHHHHHHHhhhhcCcCCCCceee
Q 045577          181 WNGISGGCKRNWEADC------GDGEVFLMFEGIKLPDKSEFTCEFECSK-YSSYVTNILYGIARVILYLPEDSRLEIIH  253 (392)
Q Consensus       181 W~g~s~GCvR~~~l~C------~~~~~~lv~e~~~~~~l~~~~~~~~~~~-~~~~~~~i~~~ia~gL~yLH~~~~~~iiH  253 (392)
                      |.-.+++.++.....-      +-.+.|+|||+|... +    |+-.-+. .-..+..|..|+++|++|||+.   +|+|
T Consensus        70 ~~v~~~nii~l~n~ftP~~~l~~~~e~y~v~e~m~~n-l----~~vi~~elDH~tis~i~yq~~~~ik~lhs~---~Iih  141 (369)
T KOG0665|consen   70 KCVNHKNIISLLNVFTPQKTLEEFQEVYLVMELMDAN-L----CQVILMELDHETISYILYQMLCGIKHLHSA---GIIH  141 (369)
T ss_pred             hhhcccceeeeeeccCccccHHHHHhHHHHHHhhhhH-H----HHHHHHhcchHHHHHHHHHHHHHHHHHHhc---ceee
Confidence            4333666666544331      125789999999853 2    2111111 2233678899999999999998   9999


Q ss_pred             cccccceeEEcCCCCCeEeeeeceEEeCCCCcceeceeeecccccCchhHH------HHHHHhcCCCcc
Q 045577          254 RDHKTSNVLLDAEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELL------QAWKLWSEGDPM  316 (392)
Q Consensus       254 rDlKp~NIll~~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~------~~~diws~G~v~  316 (392)
                      |||||+||++..+...||.|||+|+....  ....+..+.|..|.| ||+.      ..+|+|+.||++
T Consensus       142 RdLkPsnivv~~~~~lKi~dfg~ar~e~~--~~~mtpyVvtRyyra-pevil~~~~ke~vdiwSvGci~  207 (369)
T KOG0665|consen  142 RDLKPSNIVVNSDCTLKILDFGLARTEDT--DFMMTPYVVTRYYRA-PEVILGMGYKENVDIWSVGCIM  207 (369)
T ss_pred             cccCcccceecchhheeeccchhhcccCc--ccccCchhheeeccC-chheeccCCcccchhhhhhhHH
Confidence            99999999999999999999999986432  223344677888888 6554      478999999987

>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]

Probab=99.56  E-value=6.3e-15  Score=137.97  Aligned_cols=110  Identities=22%  Similarity=0.411  Sum_probs=83.1

Q ss_pred             CCCeeEEecCccCCCcChhhhhhhccc-cchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEcCC----------
Q 045577          198 DGEVFLMFEGIKLPDKSEFTCEFECSK-YSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAE----------  266 (392)
Q Consensus       198 ~~~~~lv~e~~~~~~l~~~~~~~~~~~-~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~~~----------  266 (392)
                      .+..++|+|.+.. ++..+.++..-.. +-..+..++.|+++++.|||+.   +++|.||||+|||+...          
T Consensus       163 rghiCivfellG~-S~~dFlk~N~y~~fpi~~ir~m~~QL~~sv~fLh~~---kl~HTDLKPENILfvss~~~~~~~~k~  238 (415)
T KOG0671|consen  163 RGHICIVFELLGL-STFDFLKENNYIPFPIDHIRHMGYQLLESVAFLHDL---KLTHTDLKPENILFVSSEYFKTYNPKK  238 (415)
T ss_pred             cCceEEEEeccCh-hHHHHhccCCccccchHHHHHHHHHHHHHHHHHHhc---ceeecCCChheEEEeccceEEEeccCC
Confidence            4788999998864 3334444433222 4455788999999999999998   89999999999998321          


Q ss_pred             ----------CCCeEeeeeceEEeCCCCcceeceeeecccccCchhHH------HHHHHhcCCCcc
Q 045577          267 ----------INPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELL------QAWKLWSEGDPM  316 (392)
Q Consensus       267 ----------~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~------~~~diws~G~v~  316 (392)
                                ..+||.|||-|..-.+.    ...++.|..|.| ||+.      +.+|+||.||++
T Consensus       239 ~~~~~r~~ks~~I~vIDFGsAtf~~e~----hs~iVsTRHYRA-PEViLgLGwS~pCDvWSiGCIL  299 (415)
T KOG0671|consen  239 KVCFIRPLKSTAIKVIDFGSATFDHEH----HSTIVSTRHYRA-PEVILGLGWSQPCDVWSIGCIL  299 (415)
T ss_pred             ccceeccCCCcceEEEecCCcceeccC----cceeeeccccCC-chheeccCcCCccCceeeeeEE
Confidence                      24789999999874322    245788999999 6654      478999999987

>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]

Probab=99.56  E-value=1.7e-15  Score=151.44  Aligned_cols=136  Identities=22%  Similarity=0.288  Sum_probs=105.4

Q ss_pred             CCCccccccCcCC------CCCeeEEecCccCCCcChhh--hhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeeccc
Q 045577          185 SGGCKRNWEADCG------DGEVFLMFEGIKLPDKSEFT--CEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDH  256 (392)
Q Consensus       185 s~GCvR~~~l~C~------~~~~~lv~e~~~~~~l~~~~--~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDl  256 (392)
                      |++.|..+...-.      ...-.++||||.+|++....  -+..|...+...+.++.+++.||.|||++   +|+||||
T Consensus        70 h~NIVk~f~iee~~~~~~~~~~~vlvmEyC~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~al~~LrEn---~IvHRDl  146 (732)
T KOG4250|consen   70 HPNIVKLFDIEETKFLGLVTRLPVLVMEYCSGGSLRKVLNSPENAYGLPESEFLDLLSDLVSALRHLREN---GIVHRDL  146 (732)
T ss_pred             chhhhhhcccCCccccCcccccceEEEeecCCCcHHHHhcCcccccCCCHHHHHHHHHHHHHHHHHHHHc---CceeccC
Confidence            7788877665432      23457999999999998743  34567778888999999999999999998   9999999


Q ss_pred             ccceeEEc--CCC--CCeEeeeeceEEeCCCCcceeceeeecccccCchhHHH-------HHHHhcCCCcc-eeeccccc
Q 045577          257 KTSNVLLD--AEI--NPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELLQ-------AWKLWSEGDPM-EIIDEQTK  324 (392)
Q Consensus       257 Kp~NIll~--~~~--~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~~-------~~diws~G~v~-~~ld~~~~  324 (392)
                      ||.||++-  .++  .-||+|||.|+-+.+..  .....+||..|++ |++.+       .+|+||.|+.+ +...+..+
T Consensus       147 KP~NIvl~~Gedgq~IyKLtDfG~Arel~d~s--~~~S~vGT~~YLh-Pel~E~q~~y~~tVDLWS~GvtlY~caTG~lP  223 (732)
T KOG4250|consen  147 KPGNIVLQIGEDGQSIYKLTDFGAARELDDNS--LFTSLVGTEEYLH-PELYERQKKYTATVDLWSFGVTLYECATGELP  223 (732)
T ss_pred             CCCcEEEeecCCCceEEeeecccccccCCCCC--eeeeecCchhhcC-hHHHhhccCcCceeehhhhhhHHHHHhccCCC
Confidence            99999983  333  36999999999876433  4555899999999 66554       47999999987 45555444


Q ss_pred             CC
Q 045577          325 MK  326 (392)
Q Consensus       325 ~~  326 (392)
                      |.
T Consensus       224 F~  225 (732)
T KOG4250|consen  224 FI  225 (732)
T ss_pred             CC
Confidence            43

>cd00180 PKc Catalytic domain of Protein Kinases

Probab=99.56  E-value=5.9e-15  Score=130.48  Aligned_cols=144  Identities=24%  Similarity=0.364  Sum_probs=111.7

Q ss_pred             CCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEcC-CCCCeEeeeec
Q 045577          198 DGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDA-EINPNISDFGP  276 (392)
Q Consensus       198 ~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~~-~~~~kl~DFGl  276 (392)
                      .+..++++|+++++++...............+..++.++++++.|||+.   +++|+|++|.||+++. ++.++|+|||.
T Consensus        63 ~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~---~~~H~dl~~~ni~~~~~~~~~~l~d~~~  139 (215)
T cd00180          63 ENHLYLVMEYCEGGSLKDLLKENEGKLSEDEILRILLQILEGLEYLHSN---GIIHRDLKPENILLDSDNGKVKLADFGL  139 (215)
T ss_pred             CCeEEEEEecCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHhhEEEeCCCCcEEEecCCc
Confidence            3678999999998888775544322234455788999999999999998   8999999999999999 89999999999


Q ss_pred             eEEeCCCCcceeceeeecccccCchhHH-------HHHHHhcCCCcceeecccccCCCCCCHHHHHHHHHHHHhhcccCc
Q 045577          277 ARIFGDQTEEVTGRVIGTQTLKTVPELL-------QAWKLWSEGDPMEIIDEQTKMKGPFSADELVKCIEVGLLCVQQRI  349 (392)
Q Consensus       277 a~~~~~~~~~~~~~~~gt~~y~a~~~~~-------~~~diws~G~v~~~ld~~~~~~~~~~~~~~~~~~~i~~~Cl~~dp  349 (392)
                      +........ ......+...|++ |+..       ...|+|+.|+++..+               ..+.+++..|++.+|
T Consensus       140 ~~~~~~~~~-~~~~~~~~~~~~~-pe~~~~~~~~~~~~D~~~lg~~~~~l---------------~~~~~~l~~~l~~~p  202 (215)
T cd00180         140 SKLLTSDKS-LLKTIVGTPAYMA-PEVLLGKGYYSEKSDIWSLGVILYEL---------------PELKDLIRKMLQKDP  202 (215)
T ss_pred             eEEccCCcc-hhhcccCCCCccC-hhHhcccCCCCchhhhHHHHHHHHHH---------------HHHHHHHHHHhhCCc
Confidence            987653221 1222456677777 5543       347899999776544               567788889999999


Q ss_pred             CCCCCHHHHHHH
Q 045577          350 EDWPTMSSVLTM  361 (392)
Q Consensus       350 ~~RPsm~eVv~~  361 (392)
                      ++||++.+++..
T Consensus       203 ~~R~~~~~l~~~  214 (215)
T cd00180         203 EKRPSAKEILEH  214 (215)
T ss_pred             ccCcCHHHHhhC
Confidence            999999998864

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which

>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.53  E-value=7.6e-15  Score=135.22  Aligned_cols=122  Identities=25%  Similarity=0.288  Sum_probs=98.3

Q ss_pred             CCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEcCCCCCeEeeeece
Q 045577          198 DGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEINPNISDFGPA  277 (392)
Q Consensus       198 ~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~~~~~~kl~DFGla  277 (392)
                      +..+|+|.||+.+||+.....++.-+ +++.+..+..+|..||.|||+.   +||.||||..|+|+|..|++|+.|+|++
T Consensus       323 esrlffvieyv~ggdlmfhmqrqrkl-peeharfys~ei~lal~flh~r---giiyrdlkldnvlldaeghikltdygmc  398 (593)
T KOG0695|consen  323 ESRLFFVIEYVNGGDLMFHMQRQRKL-PEEHARFYSAEICLALNFLHER---GIIYRDLKLDNVLLDAEGHIKLTDYGMC  398 (593)
T ss_pred             cceEEEEEEEecCcceeeehhhhhcC-cHHHhhhhhHHHHHHHHHHhhc---CeeeeeccccceEEccCCceeecccchh
Confidence            46799999999999998755444433 4555777888999999999998   9999999999999999999999999999


Q ss_pred             EEeCCCCcceeceeeecccccCchhHHH------HHHHhcCCCcc-eeecccccC
Q 045577          278 RIFGDQTEEVTGRVIGTQTLKTVPELLQ------AWKLWSEGDPM-EIIDEQTKM  325 (392)
Q Consensus       278 ~~~~~~~~~~~~~~~gt~~y~a~~~~~~------~~diws~G~v~-~~ld~~~~~  325 (392)
                      +.- -.....+++.+||+.|+| ||++.      ..|.|++|.++ +++.++.++
T Consensus       399 ke~-l~~gd~tstfcgtpnyia-peilrgeeygfsvdwwalgvlmfemmagrspf  451 (593)
T KOG0695|consen  399 KEG-LGPGDTTSTFCGTPNYIA-PEILRGEEYGFSVDWWALGVLMFEMMAGRSPF  451 (593)
T ss_pred             hcC-CCCCcccccccCCCcccc-hhhhcccccCceehHHHHHHHHHHHHcCCCCc
Confidence            752 223445667899999999 77763      67999999876 666664433

>PLN03224 probable serine/threonine protein kinase; Provisional

Probab=99.52  E-value=1e-14  Score=147.06  Aligned_cols=120  Identities=17%  Similarity=0.154  Sum_probs=86.0

Q ss_pred             CCCeeEEecCccCCCcChhhhhhh-----cc------------------ccchhhhhHHHHHHHhhhhcCcCCCCceeec
Q 045577          198 DGEVFLMFEGIKLPDKSEFTCEFE-----CS------------------KYSSYVTNILYGIARVILYLPEDSRLEIIHR  254 (392)
Q Consensus       198 ~~~~~lv~e~~~~~~l~~~~~~~~-----~~------------------~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHr  254 (392)
                      .+..++||||++++++........     |+                  .....+..++.|++.||.|||+.   +|+||
T Consensus       257 ~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~~~~~~~~~~~~~i~~ql~~aL~~lH~~---~ivHr  333 (507)
T PLN03224        257 KGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNMPQDKRDINVIKGVMRQVLTGLRKLHRI---GIVHR  333 (507)
T ss_pred             CCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhcccccCCHHHHHHHHHHHHHHHHHHHHC---CeecC
Confidence            467899999999998876433210     10                  01233677899999999999998   89999


Q ss_pred             ccccceeEEcCCCCCeEeeeeceEEeCCCCcceeceeeecccccCchhHHH----------------------------H
Q 045577          255 DHKTSNVLLDAEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELLQ----------------------------A  306 (392)
Q Consensus       255 DlKp~NIll~~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~~----------------------------~  306 (392)
                      ||||+||+++.++.+||+|||+++.+............+++.|++ ||...                            .
T Consensus       334 DLKp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~g~~tp~Y~a-PE~l~~~~~~~~~~~~~~~~~l~~~~~~yg~~~~  412 (507)
T PLN03224        334 DIKPENLLVTVDGQVKIIDFGAAVDMCTGINFNPLYGMLDPRYSP-PEELVMPQSCPRAPAPAMAALLSPFAWLYGRPDL  412 (507)
T ss_pred             CCchHhEEECCCCcEEEEeCcCccccccCCccCccccCCCcceeC-hhhhcCCCCCCccchhhhhhhhhhhHHhcCCCCc
Confidence            999999999999999999999997654222212222334788999 55321                            2


Q ss_pred             HHHhcCCCcce-eecc
Q 045577          307 WKLWSEGDPME-IIDE  321 (392)
Q Consensus       307 ~diws~G~v~~-~ld~  321 (392)
                      .|+|+.|+++. ++.+
T Consensus       413 ~DvwSlGvil~em~~~  428 (507)
T PLN03224        413 FDSYTAGVLLMQMCVP  428 (507)
T ss_pred             cchhhHHHHHHHHHhC
Confidence            49999998873 4443

>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]

Probab=99.48  E-value=4.6e-14  Score=132.50  Aligned_cols=162  Identities=16%  Similarity=0.202  Sum_probs=117.7

Q ss_pred             CCeeEEecCccCCCcCh--hhhhhhcccc-----chhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEcCCCCCeE
Q 045577          199 GEVFLMFEGIKLPDKSE--FTCEFECSKY-----SSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEINPNI  271 (392)
Q Consensus       199 ~~~~lv~e~~~~~~l~~--~~~~~~~~~~-----~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~~~~~~kl  271 (392)
                      ..-|..+.++..+++..  .+|+..-..+     ..+...++.|++.|+.|||++   +|||.||..+|++||+...+||
T Consensus       361 ~~P~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh~~---~ViHkDiAaRNCvIdd~LqVkl  437 (563)
T KOG1024|consen  361 ATPFVLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLHNH---GVIHKDIAARNCVIDDQLQVKL  437 (563)
T ss_pred             CcceEEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHhc---CcccchhhhhcceehhheeEEe
Confidence            34688888888888876  4455322222     223577899999999999998   8999999999999999999999


Q ss_pred             eeeeceEEeC-CCCcceeceeeecccccCchhH------HHHHHHhcCCCcc-eeecccccCCCCCCHHHHH--------
Q 045577          272 SDFGPARIFG-DQTEEVTGRVIGTQTLKTVPEL------LQAWKLWSEGDPM-EIIDEQTKMKGPFSADELV--------  335 (392)
Q Consensus       272 ~DFGla~~~~-~~~~~~~~~~~gt~~y~a~~~~------~~~~diws~G~v~-~~ld~~~~~~~~~~~~~~~--------  335 (392)
                      +|-.+++-+- .+.............||+ +|.      ..+.|+|++|.++ |++.-......+.++.+++        
T Consensus       438 tDsaLSRDLFP~DYhcLGDnEnRPvkWMs-lEal~n~~yssasDvWsfGVllWELmtlg~~PyaeIDPfEm~~ylkdGyR  516 (563)
T KOG1024|consen  438 TDSALSRDLFPGDYHCLGDNENRPVKWMS-LEALQNSHYSSASDVWSFGVLLWELMTLGKLPYAEIDPFEMEHYLKDGYR  516 (563)
T ss_pred             ccchhccccCcccccccCCCCCCcccccC-HHHHhhhhhcchhhhHHHHHHHHHHHhcCCCCccccCHHHHHHHHhccce
Confidence            9999998653 222222222334567888 443      3588999999876 4444333333344444433        


Q ss_pred             ---------HHHHHHHhhcccCcCCCCCHHHHHHHHcc
Q 045577          336 ---------KCIEVGLLCVQQRIEDWPTMSSVLTMLSN  364 (392)
Q Consensus       336 ---------~~~~i~~~Cl~~dp~~RPsm~eVv~~L~~  364 (392)
                               ++..++.-||...|++||+.+++++.|..
T Consensus       517 laQP~NCPDeLf~vMacCWallpeeRPsf~Qlv~cLse  554 (563)
T KOG1024|consen  517 LAQPFNCPDELFTVMACCWALLPEERPSFSQLVICLSE  554 (563)
T ss_pred             ecCCCCCcHHHHHHHHHHHhcCcccCCCHHHHHHHHHH
Confidence                     56678889999999999999999999875

>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]

Probab=99.44  E-value=1.3e-13  Score=137.00  Aligned_cols=218  Identities=18%  Similarity=0.167  Sum_probs=134.6

Q ss_pred             CCCCccCCCCcccc----------ccccCCcccceecccCCCCCceEEEEeCCcceEeeecCCCCCccccccCcCCCCCe
Q 045577          132 SPSDTILPGMKRGM----------NLRTGWNQNIKAWNLEKSDTPQLVLWRRTEKVFRSWNGISGGCKRNWEADCGDGEV  201 (392)
Q Consensus       132 ~ptdt~l~~~~~~~----------~~~tg~~~~l~s~kld~~g~~~l~~~~~~~~~w~~W~g~s~GCvR~~~l~C~~~~~  201 (392)
                      +|-|-.---+++|.          +++++.......-||++.......  ..+...-+...  |++.+-.+.---....+
T Consensus        12 nP~ddyellqrvgsgTygdvyKaRd~~s~elaavkvVkLep~dd~~~i--qqei~~~~dc~--h~nivay~gsylr~dkl   87 (829)
T KOG0576|consen   12 NPQDDYELLQRVGSGTYGDVYKARDKRSGELAAVKVVKLEPGDDFSGI--QQEIGMLRDCR--HPNIVAYFGSYLRRDKL   87 (829)
T ss_pred             CCccchhheeeecCCcccchhhhcccccCchhhheeeeccCCcccccc--ccceeeeecCC--CcChHHHHhhhhhhcCc
Confidence            66666665566654          445565555666667665432211  11111111111  44444333221124678


Q ss_pred             eEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEcCCCCCeEeeeeceEEeC
Q 045577          202 FLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEINPNISDFGPARIFG  281 (392)
Q Consensus       202 ~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~~~~~~kl~DFGla~~~~  281 (392)
                      .+.||||.+|.+.+...-.. ...+.++...++...+||.|||+.   +-+|||||-.||++.+.+.+|++|||.+..++
T Consensus        88 wicMEycgggslQdiy~~Tg-plselqiayvcRetl~gl~ylhs~---gk~hRdiKGanilltd~gDvklaDfgvsaqit  163 (829)
T KOG0576|consen   88 WICMEYCGGGSLQDIYHVTG-PLSELQIAYVCRETLQGLKYLHSQ---GKIHRDIKGANILLTDEGDVKLADFGVSAQIT  163 (829)
T ss_pred             EEEEEecCCCcccceeeecc-cchhHHHHHHHhhhhccchhhhcC---CcccccccccceeecccCceeecccCchhhhh
Confidence            99999999998876333222 222333455678889999999998   78999999999999999999999999987654


Q ss_pred             CCCcceeceeeecccccCchhHH---------HHHHHhcCCCcc-eeecccccCC-----------------CC---CCH
Q 045577          282 DQTEEVTGRVIGTQTLKTVPELL---------QAWKLWSEGDPM-EIIDEQTKMK-----------------GP---FSA  331 (392)
Q Consensus       282 ~~~~~~~~~~~gt~~y~a~~~~~---------~~~diws~G~v~-~~ld~~~~~~-----------------~~---~~~  331 (392)
                      .. ........||+.||| ||+.         +.+|+|+.|+.. |+-.-++.+.                 ++   ...
T Consensus       164 at-i~KrksfiGtpywma-pEvaaverkggynqlcdiwa~gitAiel~eLqpplfdlhpmr~l~LmTkS~~qpp~lkDk~  241 (829)
T KOG0576|consen  164 AT-IAKRKSFIGTPYWMA-PEVAAVERKGGYNQLCDIWALGITAIELGELQPPLFDLHPMRALFLMTKSGFQPPTLKDKT  241 (829)
T ss_pred             hh-hhhhhcccCCccccc-hhHHHHHhcccccccccccccccchhhhhhcCCcccccchHHHHHHhhccCCCCCcccCCc
Confidence            21 122234789999999 7765         357999999643 1111111111                 11   011


Q ss_pred             HHHHHHHHHHHhhcccCcCCCCCHHHHH
Q 045577          332 DELVKCIEVGLLCVQQRIEDWPTMSSVL  359 (392)
Q Consensus       332 ~~~~~~~~i~~~Cl~~dp~~RPsm~eVv  359 (392)
                      .....+-+++..|+..+|++||+.+.++
T Consensus       242 kws~~fh~fvK~altknpKkRptaeklL  269 (829)
T KOG0576|consen  242 KWSEFFHNFVKGALTKNPKKRPTAEKLL  269 (829)
T ss_pred             cchHHHHHHHHHHhcCCCccCCChhhhe
Confidence            1222344566789999999999987754

>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=99.35  E-value=6.3e-13  Score=136.92  Aligned_cols=155  Identities=19%  Similarity=0.149  Sum_probs=111.4

Q ss_pred             eeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEcCCCCCeEeeeeceEEe
Q 045577          201 VFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEINPNISDFGPARIF  280 (392)
Q Consensus       201 ~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~~~~~~kl~DFGla~~~  280 (392)
                      .+-.||||+. |+.....+..-..+.. +-.++.|+..|+.|+|+.   +|.|||+|++|+++..++.+||+|||.+..+
T Consensus       396 ~~~~mE~~~~-Dlf~~~~~~~~~~~~e-~~c~fKqL~~Gv~y~h~~---GiahrdlK~enll~~~~g~lki~Dfg~~~vf  470 (601)
T KOG0590|consen  396 ILQSMEYCPY-DLFSLVMSNGKLTPLE-ADCFFKQLLRGVKYLHSM---GLAHRDLKLENLLVTENGILKIIDFGAASVF  470 (601)
T ss_pred             chhhhhcccH-HHHHHHhcccccchhh-hhHHHHHHHHHHHHHHhc---CceeccCccccEEEecCCceEEeecCcceee
Confidence            3344999998 8877555441222222 566789999999999998   8999999999999999999999999999876


Q ss_pred             CCCC---cceeceeeecccccCchhHHH-------HHHHhcCCCcc-eeecccccCCCCC-------------------C
Q 045577          281 GDQT---EEVTGRVIGTQTLKTVPELLQ-------AWKLWSEGDPM-EIIDEQTKMKGPF-------------------S  330 (392)
Q Consensus       281 ~~~~---~~~~~~~~gt~~y~a~~~~~~-------~~diws~G~v~-~~ld~~~~~~~~~-------------------~  330 (392)
                      ....   .......+|+..|+| ||+..       ..|+|+.|.++ .|+.++.......                   .
T Consensus       471 ~~~~e~~~~~~~g~~gS~pY~a-pE~~~~~~ydpr~vDiwS~~ii~~~m~~~~~~Wk~a~~~~~~~~~~~~~~~~~~~~~  549 (601)
T KOG0590|consen  471 RYPWEKNIHESSGIVGSDPYLA-PEVLTGKEYDPRAVDVWSCGIIYICMILGRFPWKVAKKSDNSFKTNNYSDQRNIFEG  549 (601)
T ss_pred             ccCcchhhhhhcCcccCCcCcC-cccccccccCcchhhhhhccceEEEEecCCCccccccccccchhhhccccccccccC
Confidence            5222   244455789999999 77653       67999999877 3333321111000                   0


Q ss_pred             H-----HHHHHHHHHHHhhcccCcCCCCCHHHHHHH
Q 045577          331 A-----DELVKCIEVGLLCVQQRIEDWPTMSSVLTM  361 (392)
Q Consensus       331 ~-----~~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~  361 (392)
                      .     ....+...++.++++.+|.+|-+|.+|++.
T Consensus       550 ~~~~~~~lp~~~~~~~~~~l~~~P~~R~ti~~i~~d  585 (601)
T KOG0590|consen  550 PNRLLSLLPRETRIIIYRMLQLDPTKRITIEQILND  585 (601)
T ss_pred             hHHHHHhchhhHHHHHHHHccCChhheecHHHHhhC
Confidence            0     112244557789999999999999999875

>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]

Probab=99.32  E-value=1.9e-12  Score=126.99  Aligned_cols=127  Identities=22%  Similarity=0.185  Sum_probs=100.8

Q ss_pred             CCCccccccCcCCCCCeeEEecCcc-CCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEE
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIK-LPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLL  263 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~-~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll  263 (392)
                      |.+.++...++..++..|++||--. +=||+..+..+. ...+..+.-|..||+.|+++||+.   +|+|||||-+|+.+
T Consensus       628 H~NIlKlLdfFEddd~yyl~te~hg~gIDLFd~IE~kp-~m~E~eAk~IFkQV~agi~hlh~~---~ivhrdikdenviv  703 (772)
T KOG1152|consen  628 HENILKLLDFFEDDDYYYLETEVHGEGIDLFDFIEFKP-RMDEPEAKLIFKQVVAGIKHLHDQ---GIVHRDIKDENVIV  703 (772)
T ss_pred             ccchhhhhheeecCCeeEEEecCCCCCcchhhhhhccC-ccchHHHHHHHHHHHhcccccccc---CceecccccccEEE
Confidence            8999999999988888999999754 334544433322 233444677899999999999998   99999999999999


Q ss_pred             cCCCCCeEeeeeceEEeCCCCcceeceeeecccccCchhHHH-------HHHHhcCCCcceee
Q 045577          264 DAEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELLQ-------AWKLWSEGDPMEII  319 (392)
Q Consensus       264 ~~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~~-------~~diws~G~v~~~l  319 (392)
                      +.+|-+||+|||.+....   .......+||.+|.| ||++.       ..|+|+.|.+++-+
T Consensus       704 d~~g~~klidfgsaa~~k---sgpfd~f~gtv~~aa-pevl~g~~y~gk~qdiwalgillyti  762 (772)
T KOG1152|consen  704 DSNGFVKLIDFGSAAYTK---SGPFDVFVGTVDYAA-PEVLGGEKYLGKPQDIWALGILLYTI  762 (772)
T ss_pred             ecCCeEEEeeccchhhhc---CCCcceeeeeccccc-hhhhCCCccCCCcchhhhhhheeeEE
Confidence            999999999999887643   233445789999999 77763       56999999988643

>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

Probab=99.29  E-value=2e-12  Score=136.08  Aligned_cols=110  Identities=19%  Similarity=0.217  Sum_probs=81.5

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEc
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLD  264 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~  264 (392)
                      |+++++........+..|+||||+.++++......... .....++.|+.||+.||.|||..   +|+||||||+|||++
T Consensus        63 hp~Iv~~~~~~~~~~~~~lVmEy~~g~~L~~li~~~~~-l~~~~~~~i~~qil~aL~yLH~~---gIiHrDLKP~NILl~  138 (669)
T cd05610          63 SPFIVHLYYSLQSANNVYLVMEYLIGGDVKSLLHIYGY-FDEEMAVKYISEVALALDYLHRH---GIIHRDLKPDNMLIS  138 (669)
T ss_pred             CCCcCeEEEEEEECCEEEEEEeCCCCCCHHHHHHhcCC-CCHHHHHHHHHHHHHHHHHHHhC---CEEeCCccHHHEEEc
Confidence            33444433322334678999999999998776544332 23444788999999999999998   899999999999999


Q ss_pred             CCCCCeEeeeeceEEeCCCCcceeceeeecccccC
Q 045577          265 AEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKT  299 (392)
Q Consensus       265 ~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a  299 (392)
                      .++.+||+|||+++...... .......+|+.|++
T Consensus       139 ~~g~vkL~DFGls~~~~~~~-~~~~~~~~t~~~~~  172 (669)
T cd05610         139 NEGHIKLTDFGLSKVTLNRE-LNMMDILTTPSMAK  172 (669)
T ss_pred             CCCCEEEEeCCCCccccCCc-ccccccccCccccC
Confidence            99999999999998754221 22223567888877

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481

>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]

Probab=99.28  E-value=2.2e-12  Score=125.10  Aligned_cols=138  Identities=18%  Similarity=0.253  Sum_probs=95.8

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhh--hhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeE
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCE--FECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVL  262 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~--~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIl  262 (392)
                      -..|+|.+..+--.+.+|||+|-..+. |.+...+  ....+...++..++.|+..||..|...   +|+|.||||.|||
T Consensus       493 k~Hclrl~r~F~hknHLClVFE~LslN-LRevLKKyG~nvGL~ikaVRsYaqQLflALklLK~c---~vlHaDIKPDNiL  568 (752)
T KOG0670|consen  493 KFHCLRLFRHFKHKNHLCLVFEPLSLN-LREVLKKYGRNVGLHIKAVRSYAQQLFLALKLLKKC---GVLHADIKPDNIL  568 (752)
T ss_pred             hhHHHHHHHHhhhcceeEEEehhhhch-HHHHHHHhCcccceeehHHHHHHHHHHHHHHHHHhc---CeeecccCccceE
Confidence            558999887776568899999988753 3332222  222234555788999999999999775   9999999999999


Q ss_pred             EcCC-CCCeEeeeeceEEeCCCCcceeceeeecccccCchhHH------HHHHHhcCCCcc-eeecccccCCCCCC
Q 045577          263 LDAE-INPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIIDEQTKMKGPFS  330 (392)
Q Consensus       263 l~~~-~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld~~~~~~~~~~  330 (392)
                      +++. ..+||||||.|...++..   .+...-+.-|.| ||++      +..|+||.||.+ |++.++..|++..+
T Consensus       569 VNE~k~iLKLCDfGSA~~~~ene---itPYLVSRFYRa-PEIiLG~~yd~~iD~WSvgctLYElYtGkIlFpG~TN  640 (752)
T KOG0670|consen  569 VNESKNILKLCDFGSASFASENE---ITPYLVSRFYRA-PEIILGLPYDYPIDTWSVGCTLYELYTGKILFPGRTN  640 (752)
T ss_pred             eccCcceeeeccCcccccccccc---ccHHHHHHhccC-cceeecCcccCCccceeeceeeEEeeccceecCCCCc
Confidence            9865 568999999998765221   111233444556 5543      577999999976 55556555555443

>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]

Probab=99.28  E-value=2.2e-12  Score=113.62  Aligned_cols=146  Identities=23%  Similarity=0.313  Sum_probs=99.8

Q ss_pred             CCCccccccCcC--CCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeE
Q 045577          185 SGGCKRNWEADC--GDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVL  262 (392)
Q Consensus       185 s~GCvR~~~l~C--~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIl  262 (392)
                      +++.+......-  .+..--+++||+.+.|..... ..   ...+.+..++.+++.||.|+|+.   +|+|||+||.|++
T Consensus        92 g~NIi~L~DiV~Dp~SktpaLiFE~v~n~Dfk~ly-~t---l~d~dIryY~~elLkALdyCHS~---GImHRDVKPhNvm  164 (338)
T KOG0668|consen   92 GPNIIKLLDIVKDPESKTPSLIFEYVNNTDFKQLY-PT---LTDYDIRYYIYELLKALDYCHSM---GIMHRDVKPHNVM  164 (338)
T ss_pred             CCCeeehhhhhcCccccCchhHhhhhccccHHHHh-hh---hchhhHHHHHHHHHHHHhHHHhc---CcccccCCcceee
Confidence            344444443321  134457899999887654421 11   11233567889999999999999   9999999999999


Q ss_pred             EcCC-CCCeEeeeeceEEeCCCCcceeceeeecccccCchhHH-------HHHHHhcCCCcce--eecccccCCCCCCHH
Q 045577          263 LDAE-INPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELL-------QAWKLWSEGDPME--IIDEQTKMKGPFSAD  332 (392)
Q Consensus       263 l~~~-~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~-------~~~diws~G~v~~--~ld~~~~~~~~~~~~  332 (392)
                      +|.. -.++++|.|+|.+.....+...  .+.+..|.. ||++       +..|+||.||++.  ++...+-+.+..+.+
T Consensus       165 Idh~~rkLrlIDWGLAEFYHp~~eYnV--RVASRyfKG-PELLVdy~~YDYSLD~WS~GcmlA~miFrkepFFhG~dN~D  241 (338)
T KOG0668|consen  165 IDHELRKLRLIDWGLAEFYHPGKEYNV--RVASRYFKG-PELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYD  241 (338)
T ss_pred             echhhceeeeeecchHhhcCCCceeee--eeehhhcCC-chheeechhccccHHHHHHHHHHHHHHhccCcccCCCCCHH
Confidence            9854 5689999999988754443332  233444444 5543       5789999999883  344455667788888


Q ss_pred             HHHHHHHH
Q 045577          333 ELVKCIEV  340 (392)
Q Consensus       333 ~~~~~~~i  340 (392)
                      ++.++.++
T Consensus       242 QLVkIakV  249 (338)
T KOG0668|consen  242 QLVKIAKV  249 (338)
T ss_pred             HHHHHHHH
Confidence            88887764

>PRK09188 serine/threonine protein kinase; Provisional

Probab=99.27  E-value=3.4e-12  Score=123.75  Aligned_cols=94  Identities=17%  Similarity=0.116  Sum_probs=71.2

Q ss_pred             CCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeeccc-ccceeEEcCCCCCeEeeeece
Q 045577          199 GEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDH-KTSNVLLDAEINPNISDFGPA  277 (392)
Q Consensus       199 ~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDl-Kp~NIll~~~~~~kl~DFGla  277 (392)
                      +..|++|||++++++... ...      . ...++.++++||.|||+.   +|+|||| ||+||+++.++.+||+|||++
T Consensus        91 ~~~~LVmE~~~G~~L~~~-~~~------~-~~~~~~~i~~aL~~lH~~---gIiHrDL~KP~NILv~~~~~ikLiDFGlA  159 (365)
T PRK09188         91 GKDGLVRGWTEGVPLHLA-RPH------G-DPAWFRSAHRALRDLHRA---GITHNDLAKPQNWLMGPDGEAAVIDFQLA  159 (365)
T ss_pred             CCcEEEEEccCCCCHHHh-Ccc------c-hHHHHHHHHHHHHHHHHC---CCeeCCCCCcceEEEcCCCCEEEEECccc
Confidence            467999999999888521 110      0 246788999999999998   9999999 999999999999999999999


Q ss_pred             EEeCCCCcc-------eeceeeecccccCchhHH
Q 045577          278 RIFGDQTEE-------VTGRVIGTQTLKTVPELL  304 (392)
Q Consensus       278 ~~~~~~~~~-------~~~~~~gt~~y~a~~~~~  304 (392)
                      +.+......       ......+++.|++ ||+.
T Consensus       160 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~-pe~~  192 (365)
T PRK09188        160 SVFRRRGALYRIAAYEDLRHLLKHKRTYA-PDAL  192 (365)
T ss_pred             eecccCcchhhhhhhhhhhhhhccCccCC-cccC
Confidence            977532211       1124567778888 5544

>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]

Probab=99.24  E-value=1.4e-11  Score=110.97  Aligned_cols=128  Identities=13%  Similarity=0.117  Sum_probs=84.4

Q ss_pred             CCCccccccC-cCCCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEE
Q 045577          185 SGGCKRNWEA-DCGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLL  263 (392)
Q Consensus       185 s~GCvR~~~l-~C~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll  263 (392)
                      |+..+..... +...+-.++++||++.|||....-.  ...-+..-.+++.|+++|+.|+|++   .++|||||.+|||+
T Consensus        80 H~hIi~tY~vaFqt~d~YvF~qE~aP~gdL~snv~~--~GigE~~~K~v~~ql~SAi~fMHsk---nlVHRdlK~eNiLi  154 (378)
T KOG1345|consen   80 HQHIIDTYEVAFQTSDAYVFVQEFAPRGDLRSNVEA--AGIGEANTKKVFAQLLSAIEFMHSK---NLVHRDLKAENILI  154 (378)
T ss_pred             chhhhHHHHHHhhcCceEEEeeccCccchhhhhcCc--ccccHHHHHHHHHHHHHHHHHhhcc---chhhcccccceEEE
Confidence            4555544332 2223567789999999999764322  1222333578999999999999999   89999999999999


Q ss_pred             c--CCCCCeEeeeeceEEeCCCCcceeceeeecccccCchhHH----------HHHHHhcCCCcc-eeecc
Q 045577          264 D--AEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELL----------QAWKLWSEGDPM-EIIDE  321 (392)
Q Consensus       264 ~--~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~----------~~~diws~G~v~-~~ld~  321 (392)
                      -  +...+|++|||+.+..+.    ......-+..|.++++..          ...|+|.+|+++ .++.+
T Consensus       155 f~~df~rvKlcDFG~t~k~g~----tV~~~~~~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~cltG  221 (378)
T KOG1345|consen  155 FDADFYRVKLCDFGLTRKVGT----TVKYLEYVNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIFFYCLTG  221 (378)
T ss_pred             ecCCccEEEeeecccccccCc----eehhhhhhcccCCcHHHhhccccceEecccccchheeeeeeeeecC
Confidence            3  334799999999875431    111122334555533332          245899999876 34444

>smart00221 STYKc Protein kinase; unclassified specificity

Probab=99.21  E-value=2.2e-11  Score=109.49  Aligned_cols=137  Identities=23%  Similarity=0.258  Sum_probs=97.5

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEc
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLD  264 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~  264 (392)
                      +.+.++...........++++|+++++++...............+..++.+++.++.|||+.   +++|+|++|.||+++
T Consensus        56 ~~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~di~~~ni~v~  132 (225)
T smart00221       56 HPNIVKLYGVFEDPEPLYLVMEYCEGGDLFDYLRKKGGKLSEEEARFYLRQILEALEYLHSL---GIVHRDLKPENILLG  132 (225)
T ss_pred             CCChhhheeeeecCCceEEEEeccCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEc
Confidence            33444433333334678999999998888765544332134455788999999999999998   899999999999999


Q ss_pred             CCCCCeEeeeeceEEeCCCCcceeceeeecccccCchhHH-------HHHHHhcCCCcc-eeecccccC
Q 045577          265 AEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELL-------QAWKLWSEGDPM-EIIDEQTKM  325 (392)
Q Consensus       265 ~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~-------~~~diws~G~v~-~~ld~~~~~  325 (392)
                      .++.++|+|||.+...............++..|++ |+..       ...|+|+.|+++ +++.++..+
T Consensus       133 ~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~~~-pe~~~~~~~~~~~~Dv~~lG~~~~~l~~g~~pf  200 (225)
T smart00221      133 MDGLVKLADFGLARFIHRDLAALLKTVKGTPFYLA-PEVLLGGKGYGEAVDIWSLGVILYELLWGPEPF  200 (225)
T ss_pred             CCCCEEEeeCceeeEecCcccccccceeccCCcCC-HhHhcCCCCCCchhhHHHHHHHHHHHHHCCCCc
Confidence            99999999999998875332112233567778888 6654       367888888754 555553333

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.

>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain

Probab=99.16  E-value=3.1e-11  Score=107.15  Aligned_cols=76  Identities=16%  Similarity=0.108  Sum_probs=60.8

Q ss_pred             eeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCc-CCCCceeecccccceeEEcCCCCCeEeeeeceEE
Q 045577          201 VFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPE-DSRLEIIHRDHKTSNVLLDAEINPNISDFGPARI  279 (392)
Q Consensus       201 ~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~-~~~~~iiHrDlKp~NIll~~~~~~kl~DFGla~~  279 (392)
                      .|++|||++++++....... ..........++.|++.++.|+|+ .   +|+||||||+||+++ ++.++|+|||+++.
T Consensus        92 ~~lVmE~~~g~~~~~~~l~~-~~~~~~~~~~i~~~l~~~l~~lH~~~---givHrDlkP~NIll~-~~~~~liDFG~a~~  166 (190)
T cd05145          92 NVLVMEFIGDDGSPAPRLKD-VPLEEEEAEELYEQVVEQMRRLYQEA---GLVHGDLSEYNILYH-DGKPYIIDVSQAVE  166 (190)
T ss_pred             CEEEEEEecCCCchhhhhhh-ccCCHHHHHHHHHHHHHHHHHHHHhC---CEecCCCChhhEEEE-CCCEEEEEccccee
Confidence            58999999987554322222 122334478899999999999999 7   899999999999999 78999999999987


Q ss_pred             eC
Q 045577          280 FG  281 (392)
Q Consensus       280 ~~  281 (392)
                      ..
T Consensus       167 ~~  168 (190)
T cd05145         167 LD  168 (190)
T ss_pred             cC
Confidence            54

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro

>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain

Probab=99.15  E-value=2.9e-11  Score=107.36  Aligned_cols=76  Identities=14%  Similarity=0.097  Sum_probs=59.4

Q ss_pred             CeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhc-CcCCCCceeecccccceeEEcCCCCCeEeeeeceE
Q 045577          200 EVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYL-PEDSRLEIIHRDHKTSNVLLDAEINPNISDFGPAR  278 (392)
Q Consensus       200 ~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yL-H~~~~~~iiHrDlKp~NIll~~~~~~kl~DFGla~  278 (392)
                      +.++||||++++++.....+.. ......+..++.|++.+|.|+ |+.   +|+||||||+||+++ ++.++|+|||++.
T Consensus        91 ~~~iVmE~i~g~~l~~~~~~~~-~~~~~~~~~i~~qi~~~L~~l~H~~---giiHrDlkP~NIli~-~~~v~LiDFG~a~  165 (190)
T cd05147          91 SHVLVMEFIGDDGWAAPRLKDA-PLSESKARELYLQVIQIMRILYQDC---RLVHADLSEYNLLYH-DGKLYIIDVSQSV  165 (190)
T ss_pred             CCEEEEEEeCCCCCcchhhhcC-CCCHHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEE-CCcEEEEEccccc
Confidence            3489999999876543222221 223445788999999999999 676   899999999999998 4789999999987


Q ss_pred             Ee
Q 045577          279 IF  280 (392)
Q Consensus       279 ~~  280 (392)
                      ..
T Consensus       166 ~~  167 (190)
T cd05147         166 EH  167 (190)
T ss_pred             cC
Confidence            54

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c

>PRK12274 serine/threonine protein kinase; Provisional

Probab=98.96  E-value=6.6e-10  Score=98.96  Aligned_cols=71  Identities=17%  Similarity=0.049  Sum_probs=58.1

Q ss_pred             CeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeeccc-ccceeEEcCCCCCeEeeeeceE
Q 045577          200 EVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDH-KTSNVLLDAEINPNISDFGPAR  278 (392)
Q Consensus       200 ~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDl-Kp~NIll~~~~~~kl~DFGla~  278 (392)
                      ..|++|||+.+.++......        ....++.|++.+|.++|+.   +|+|||| ||+||+++.++.++|+|||++.
T Consensus        72 ~~~lvmeyI~G~~L~~~~~~--------~~~~~~~qi~~~L~~lH~~---GIvHrDL~kp~NILv~~~g~i~LIDFG~A~  140 (218)
T PRK12274         72 GRHLDRSYLAGAAMYQRPPR--------GDLAYFRAARRLLQQLHRC---GVAHNDLAKEANWLVQEDGSPAVIDFQLAV  140 (218)
T ss_pred             CEEEEEeeecCccHHhhhhh--------hhHHHHHHHHHHHHHHHHC---cCccCCCCCcceEEEcCCCCEEEEECCCce
Confidence            46999999998887432111        1245678899999999998   9999999 7999999999999999999998


Q ss_pred             EeC
Q 045577          279 IFG  281 (392)
Q Consensus       279 ~~~  281 (392)
                      ...
T Consensus       141 ~~~  143 (218)
T PRK12274        141 RGN  143 (218)
T ss_pred             ecC
Confidence            644

>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]

Probab=98.96  E-value=1.1e-09  Score=103.80  Aligned_cols=165  Identities=16%  Similarity=0.186  Sum_probs=100.3

Q ss_pred             CCCccccccCcCCC---------------------------CCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHH
Q 045577          185 SGGCKRNWEADCGD---------------------------GEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIA  237 (392)
Q Consensus       185 s~GCvR~~~l~C~~---------------------------~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia  237 (392)
                      |++.||....+|++                           ...|+||...+. ++..+.|.+. ..+.. ..-++.|+.
T Consensus       275 HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~g~g~~~tlylvMkrY~~-tLr~yl~~~~-~s~r~-~~~~laQlL  351 (598)
T KOG4158|consen  275 HPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPSGAGEPKTLYLVMKRYRQ-TLREYLWTRH-RSYRT-GRVILAQLL  351 (598)
T ss_pred             CCCEEeehhhhhhhhccCCchhhhCcccccceecccccCCCceEEEehhcchh-hHHHHHhcCC-CchHH-HHHHHHHHH
Confidence            78888877766642                           235777776542 3433444322 12333 355788999


Q ss_pred             HhhhhcCcCCCCceeecccccceeEE--cCCCC--CeEeeeeceEEeCC-----CCcceeceeeecccccCchhHHH---
Q 045577          238 RVILYLPEDSRLEIIHRDHKTSNVLL--DAEIN--PNISDFGPARIFGD-----QTEEVTGRVIGTQTLKTVPELLQ---  305 (392)
Q Consensus       238 ~gL~yLH~~~~~~iiHrDlKp~NIll--~~~~~--~kl~DFGla~~~~~-----~~~~~~~~~~gt~~y~a~~~~~~---  305 (392)
                      +|+.|||++   +|.|||+|+.|||+  |++..  ..|+|||++-.-..     ..+......-|....|| ||+..   
T Consensus       352 Eav~hL~~h---gvAhRDlKSDNiL~ElddD~~P~LVvaDFGCcLAd~~hGlqlpy~S~~Vd~GGNa~lmA-PEi~ta~P  427 (598)
T KOG4158|consen  352 EAVTHLHKH---GVAHRDLKSDNILLELDDDEIPQLVVADFGCCLADDNHGLQLPYESDEVDLGGNAKLMA-PEIATAVP  427 (598)
T ss_pred             HHHHHHHHc---cchhhcccccceEEEecCCCCcEEEEcccceeeeccccccccccccccccCCCcceecc-hhhhhcCC
Confidence            999999998   99999999999998  44444  46899998753221     00111111346666788 77653   


Q ss_pred             ---------HHHHhcCCCcce-eecccccCCC---------CCC--------HHHHHHHHHHHHhhcccCcCCCCCHH
Q 045577          306 ---------AWKLWSEGDPME-IIDEQTKMKG---------PFS--------ADELVKCIEVGLLCVQQRIEDWPTMS  356 (392)
Q Consensus       306 ---------~~diws~G~v~~-~ld~~~~~~~---------~~~--------~~~~~~~~~i~~~Cl~~dp~~RPsm~  356 (392)
                               +.|.|..|.+.+ ++...-++..         .+.        ......+.+++...++.||.+||+..
T Consensus       428 Gp~avvny~kAD~WA~GalaYEIfg~~NPFY~rGem~L~~r~Yqe~qLPalp~~vpp~~rqlV~~lL~r~pskRvsp~  505 (598)
T KOG4158|consen  428 GPNAVVNYEKADTWAAGALAYEIFGRSNPFYKRGEMLLDTRTYQESQLPALPSRVPPVARQLVFDLLKRDPSKRVSPN  505 (598)
T ss_pred             CCceeeccchhhhhhhhhhHHHHhccCCcccccchheechhhhhhhhCCCCcccCChHHHHHHHHHhcCCccccCCcc
Confidence                     668999987652 2211111110         011        11122445677788999999998754

>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]

Probab=98.95  E-value=7.7e-10  Score=99.95  Aligned_cols=159  Identities=14%  Similarity=0.149  Sum_probs=107.4

Q ss_pred             CCeeEEecCccCCCcChhhhhhhccc-cchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEcCCCCCeEeeeece
Q 045577          199 GEVFLMFEGIKLPDKSEFTCEFECSK-YSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEINPNISDFGPA  277 (392)
Q Consensus       199 ~~~~lv~e~~~~~~l~~~~~~~~~~~-~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~~~~~~kl~DFGla  277 (392)
                      .+..++-.||+.+.+.....+..... ...++.+++.++|+|+.|||+-. +-|..--+.+..+++|++..++|+ .+-+
T Consensus       260 pnlv~isq~mp~gslynvlhe~t~vvvd~sqav~faldiargmaflhsle-p~ipr~~lns~hvmidedltaris-mad~  337 (448)
T KOG0195|consen  260 PNLVIISQYMPFGSLYNVLHEQTSVVVDHSQAVRFALDIARGMAFLHSLE-PMIPRFYLNSKHVMIDEDLTARIS-MADT  337 (448)
T ss_pred             CCceEeeeeccchHHHHHHhcCccEEEecchHHHHHHHHHhhHHHHhhcc-hhhhhhhcccceEEecchhhhhee-cccc
Confidence            56788999999999887666554333 45557899999999999999854 234455688889999999988875 2222


Q ss_pred             EEeCCCCcceeceeeecccccCchhHHH---------HHHHhcCCCcc-eeecccccC-----------------CCCCC
Q 045577          278 RIFGDQTEEVTGRVIGTQTLKTVPELLQ---------AWKLWSEGDPM-EIIDEQTKM-----------------KGPFS  330 (392)
Q Consensus       278 ~~~~~~~~~~~~~~~gt~~y~a~~~~~~---------~~diws~G~v~-~~ld~~~~~-----------------~~~~~  330 (392)
                      ++.     .........+.||+ ||.++         +.|+||+..++ |+.....++                 +...+
T Consensus       338 kfs-----fqe~gr~y~pawms-pealqrkped~n~raadmwsfaillwel~trevpfadlspmecgmkialeglrv~ip  411 (448)
T KOG0195|consen  338 KFS-----FQEVGRAYSPAWMS-PEALQRKPEDLNIRAADMWSFAILLWELNTREVPFADLSPMECGMKIALEGLRVHIP  411 (448)
T ss_pred             eee-----eeccccccCcccCC-HHHHhcCchhcchhhhhHHHHHHHHHHhhccccccccCCchhhhhhhhhccccccCC
Confidence            221     01111345678898 66553         67899887655 222221111                 11222


Q ss_pred             HHHHHHHHHHHHhhcccCcCCCCCHHHHHHHHccC
Q 045577          331 ADELVKCIEVGLLCVQQRIEDWPTMSSVLTMLSNE  365 (392)
Q Consensus       331 ~~~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~L~~~  365 (392)
                      +.....+.+++.-|+.+||.+||.+..|+-.||+.
T Consensus       412 pgis~hm~klm~icmnedpgkrpkfdmivpilekm  446 (448)
T KOG0195|consen  412 PGISRHMNKLMNICMNEDPGKRPKFDMIVPILEKM  446 (448)
T ss_pred             CCccHHHHHHHHHHhcCCCCcCCCcceehhhHHHh
Confidence            33333455666789999999999999999999875

>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]

Probab=98.91  E-value=2.5e-10  Score=113.82  Aligned_cols=115  Identities=25%  Similarity=0.259  Sum_probs=92.2

Q ss_pred             CCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEcCCCCCeEeeeec
Q 045577          197 GDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEINPNISDFGP  276 (392)
Q Consensus       197 ~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~~~~~~kl~DFGl  276 (392)
                      .+++.++++++..++++....+...-..+.. ...+...++-++.++|+.   +|+|||+|++||+++.+|++|+.|||+
T Consensus        68 t~~kl~l~ld~~rgg~lft~l~~~~~f~~~~-~~~~~aelaLald~lh~l---~iiyrd~k~enilld~~Ghi~~tdfgl  143 (612)
T KOG0603|consen   68 TDGKLYLILDFLRGGDLFTRLSKEVMFDELD-VAFYLAELALALDHLHKL---GIAYRDYKLENVLLLLEGHIKLTDFGL  143 (612)
T ss_pred             cccchhHhhhhcccchhhhccccCCchHHHH-HHHHHHHHHHHHhhcchh---HHHHhcccccceeecccCccccCCchh
Confidence            3678999999999999988666544333333 455667788999999998   899999999999999999999999999


Q ss_pred             eEEeCCCCcceeceeeecccccCchhHHH----HHHHhcCCCcc-eeecc
Q 045577          277 ARIFGDQTEEVTGRVIGTQTLKTVPELLQ----AWKLWSEGDPM-EIIDE  321 (392)
Q Consensus       277 a~~~~~~~~~~~~~~~gt~~y~a~~~~~~----~~diws~G~v~-~~ld~  321 (392)
                      ++..-....     .+||..||| ||+..    +.|.|+.|.+. +++.+
T Consensus       144 ske~v~~~~-----~cgt~eymA-pEI~~gh~~a~D~ws~gvl~felltg  187 (612)
T KOG0603|consen  144 SKEAVKEKI-----ACGTYEYRA-PEIINGHLSAADWWSFGVLAFELLTG  187 (612)
T ss_pred             hhHhHhhhh-----cccchhhhh-hHhhhccCCcccchhhhhhHHHHhhC
Confidence            987542221     289999999 88775    67999999865 66666

>smart00090 RIO RIO-like kinase

Probab=98.90  E-value=1.2e-09  Score=100.43  Aligned_cols=77  Identities=14%  Similarity=0.032  Sum_probs=60.1

Q ss_pred             CeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCc-eeecccccceeEEcCCCCCeEeeeeceE
Q 045577          200 EVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLE-IIHRDHKTSNVLLDAEINPNISDFGPAR  278 (392)
Q Consensus       200 ~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~-iiHrDlKp~NIll~~~~~~kl~DFGla~  278 (392)
                      ..++||||+.++++......... .....+..++.|++.++.|||+.   + ++|||+||+||+++ ++.++|+|||.+.
T Consensus       122 ~~~lV~E~~~g~~L~~~~~~~~~-~~~~~~~~i~~qi~~~l~~LH~~---g~iiH~Dikp~NIli~-~~~i~LiDFg~a~  196 (237)
T smart00090      122 RNVLVMEFIGGDGLPAPRLKDVE-PEEEEEFELYDDILEEMRKLYKE---GELVHGDLSEYNILVH-DGKVVIIDVSQSV  196 (237)
T ss_pred             CceEEEEEecCCcccccccccCC-cchHHHHHHHHHHHHHHHHHHhc---CCEEeCCCChhhEEEE-CCCEEEEEChhhh
Confidence            45899999998877543211111 11223568899999999999998   8 99999999999999 7899999999987


Q ss_pred             EeC
Q 045577          279 IFG  281 (392)
Q Consensus       279 ~~~  281 (392)
                      ...
T Consensus       197 ~~~  199 (237)
T smart00090      197 ELD  199 (237)
T ss_pred             ccC
Confidence            543

>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]

Probab=98.89  E-value=1.3e-09  Score=103.78  Aligned_cols=160  Identities=18%  Similarity=0.260  Sum_probs=101.3

Q ss_pred             CCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEcC-CCCCeEeeeec
Q 045577          198 DGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDA-EINPNISDFGP  276 (392)
Q Consensus       198 ~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~~-~~~~kl~DFGl  276 (392)
                      ++.+.+|+||++..+........   . -..+..++..+..||.++|.+   +|||||+||+|+|.+. .+.-.|.|||+
T Consensus       107 nd~v~ivlp~~~H~~f~~l~~~l---~-~~~i~~Yl~~ll~Al~~~h~~---GIvHRDiKpsNFL~n~~t~rg~LvDFgL  179 (418)
T KOG1167|consen  107 NDQVAIVLPYFEHDRFRDLYRSL---S-LAEIRWYLRNLLKALAHLHKN---GIVHRDIKPSNFLYNRRTQRGVLVDFGL  179 (418)
T ss_pred             CCeeEEEecccCccCHHHHHhcC---C-HHHHHHHHHHHHHHhhhhhcc---CccccCCCccccccccccCCceEEechh
Confidence            46789999999976655433221   1 223677889999999999999   9999999999999975 45678999999


Q ss_pred             eEEeC-C-------C----C--------------------c-----------ceeceeeecccccCchhHHH-------H
Q 045577          277 ARIFG-D-------Q----T--------------------E-----------EVTGRVIGTQTLKTVPELLQ-------A  306 (392)
Q Consensus       277 a~~~~-~-------~----~--------------------~-----------~~~~~~~gt~~y~a~~~~~~-------~  306 (392)
                      |.... .       .    .                    .           .......||+||.| ||++.       +
T Consensus       180 A~~~d~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~p~g~~~~~~~~r~~~~anrAGT~GfRa-PEvL~k~~~Qtta  258 (418)
T KOG1167|consen  180 AQRYDGYQQTEHSRSYSGRHATPAMGKDVHCQSVATASKPAGYYRRCNDGRPSERANRAGTPGFRA-PEVLFRCPRQTTA  258 (418)
T ss_pred             HHHHHhhhhhhhhhhhhcccCCccccCcccccccccccCCCCceeccCCCccceecccCCCCCCCc-hHHHhhccCcCCc
Confidence            87210 0       0    0                    0           00011468999998 88774       5


Q ss_pred             HHHhcCCCcc-eeecccccCC-CCCCHHHHHHHH---------HHHH--hh-cccCcCCCCCHHHHHHHHccC
Q 045577          307 WKLWSEGDPM-EIIDEQTKMK-GPFSADELVKCI---------EVGL--LC-VQQRIEDWPTMSSVLTMLSNE  365 (392)
Q Consensus       307 ~diws~G~v~-~~ld~~~~~~-~~~~~~~~~~~~---------~i~~--~C-l~~dp~~RPsm~eVv~~L~~~  365 (392)
                      .|+|+.|.++ .++..+.++. ...+.+.+.+++         +.+.  .+ +-..++.+|++.++....+..
T Consensus       259 iDiws~GVI~Lslls~~~PFf~a~dd~~al~ei~tifG~~~mrk~A~l~g~~~l~~ksn~~~~~e~~~~f~s~  331 (418)
T KOG1167|consen  259 IDIWSAGVILLSLLSRRYPFFKAKDDADALAEIATIFGSAEMRKCAALPGRILLWQKSNIPTIPELRVNFETL  331 (418)
T ss_pred             cceeeccceeehhhccccccccCccccchHHHHHHHhChHHHHHHhhcCCceeeeccccccccHHHHhchhcc
Confidence            7999999876 4444433332 222222222111         1111  12 011225588888888777665

>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]

Probab=98.86  E-value=3.9e-10  Score=110.38  Aligned_cols=150  Identities=16%  Similarity=0.224  Sum_probs=102.6

Q ss_pred             CeeEEecCccCCCcChhhh--hhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEcCCCCCeEeeeece
Q 045577          200 EVFLMFEGIKLPDKSEFTC--EFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEINPNISDFGPA  277 (392)
Q Consensus       200 ~~~lv~e~~~~~~l~~~~~--~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~~~~~~kl~DFGla  277 (392)
                      ..|+.|++++-..+.....  +..|......++.++.|++.|+.|   +   +.+|||+||.||....+..+||.|||+.
T Consensus       330 ~lyI~Mn~c~~~tledWl~rr~~~e~~s~s~~~~~~~q~~~~~~y---k---~~ihrdlkp~nif~~~d~q~kIgDFgl~  403 (516)
T KOG1033|consen  330 YLYIQMNLCEKETLEDWLRRRRTGEERSLSLMLDIFKQIAPAVEY---K---GLIHRDLKPSNIFFSDDDQLKIGDFGLV  403 (516)
T ss_pred             chhhhhhhhhhhhHHHHhhCCCcccccchhHHHHHHHhhccchhh---c---cchhhhccccccccccchhhhhhhhhhe
Confidence            3688888888877777553  233444566689999999999999   4   7999999999999999889999999998


Q ss_pred             EEeCCCC-----cceeceeeecccccCchhHH-----HHHHHhcCCCcc-eeec---cc----c----cCCCCCCHH---
Q 045577          278 RIFGDQT-----EEVTGRVIGTQTLKTVPELL-----QAWKLWSEGDPM-EIID---EQ----T----KMKGPFSAD---  332 (392)
Q Consensus       278 ~~~~~~~-----~~~~~~~~gt~~y~a~~~~~-----~~~diws~G~v~-~~ld---~~----~----~~~~~~~~~---  332 (392)
                      ..+....     ....+...||..||+++++.     ..+|++++|.++ |++.   ..    .    .-.+.++++   
T Consensus       404 ts~~~~~~~~~~~a~~t~~~gt~~YmsPEQi~g~~y~~kvdIyaLGlil~EL~~~f~T~~er~~t~~d~r~g~ip~~~~~  483 (516)
T KOG1033|consen  404 TSQDKDETVAPAAASHTQQVGTLLYMSPEQIRGQQYSEKVDIYALGLILAELLIQFSTQFERIATLTDIRDGIIPPEFLQ  483 (516)
T ss_pred             eecccCCcccchhhhhhhcccccccCCHHHHhhhhhhhhcchhhHHHHHHHHHHHhccHHHHHHhhhhhhcCCCChHHhh
Confidence            8765332     22334578999999944433     478999999776 2111   00    0    000111211   


Q ss_pred             HHHHHHHHHHhhcccCcCCCCCH
Q 045577          333 ELVKCIEVGLLCVQQRIEDWPTM  355 (392)
Q Consensus       333 ~~~~~~~i~~~Cl~~dp~~RPsm  355 (392)
                      ....-..+..+.+...|.+||+.
T Consensus       484 d~p~e~~ll~~lls~~p~~RP~~  506 (516)
T KOG1033|consen  484 DYPEEYTLLQQLLSPSPEERPSA  506 (516)
T ss_pred             cCcHHHHHHHHhcCCCcccCchH
Confidence            11122355668999999999943

>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]

Probab=98.84  E-value=1.2e-09  Score=108.42  Aligned_cols=177  Identities=18%  Similarity=0.245  Sum_probs=110.3

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCce-eecccccceeEE
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEI-IHRDHKTSNVLL  263 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~i-iHrDlKp~NIll  263 (392)
                      |.+|.+-..+.-.++..+.+.+|+..|.+.+......-...+.-...++.+|+.||.|+|..   +| .|+.+++.|.++
T Consensus         6 h~n~~~f~g~~~~~~~~~~i~~~c~rGsl~D~i~~~~~~~d~~F~~s~~rdi~~Gl~ylh~s---~i~~hg~l~s~nClv   82 (484)
T KOG1023|consen    6 HDNLNKFIGASVDGPEMIVIWEYCSRGSLLDILSNEDIKLDYFFILSFIRDISKGLAYLHNS---PIGYHGALKSSNCLV   82 (484)
T ss_pred             hhhhhhheeeEecCCceEEEEeeecCccHHhHHhccccCccHHHHHHHHHHHHHHHHHHhcC---cceeeeeecccccee
Confidence            45566655554445788999999999999875444333333444667889999999999986   34 999999999999


Q ss_pred             cCCCCCeEeeeeceEEeCCCCc-ceeceeeecccccCchhHHH-------------HHHHhcCCCcc-------------
Q 045577          264 DAEINPNISDFGPARIFGDQTE-EVTGRVIGTQTLKTVPELLQ-------------AWKLWSEGDPM-------------  316 (392)
Q Consensus       264 ~~~~~~kl~DFGla~~~~~~~~-~~~~~~~gt~~y~a~~~~~~-------------~~diws~G~v~-------------  316 (392)
                      |....+|++|||+......... .......-..-|.| |+.+.             ..|+++.|.++             
T Consensus        83 d~~w~lklt~~Gl~~~~~~~~~~~~~~~~~~~~lw~a-Pellr~~~~~~~~~~~~~~gdiYs~~ii~~ei~~r~~~~~~~  161 (484)
T KOG1023|consen   83 DSRWVLKLTDFGLNSLLEETAEPEAHHPIRKALLWTA-PELLRGALSQSLESALTQKGDIYSFGIIMYEILFRSGPFDLR  161 (484)
T ss_pred             eeeEEEEechhhhcccccccccccccchhHHHHhccC-HHHhcccccccccccccccCCeehHHHHHHHHHhccCccccc
Confidence            9999999999999876531000 00000001112222 22221             12334333322             


Q ss_pred             -------eee----c-ccccCCCCCC-H-HHHHHHHHHHHhhcccCcCCCCCHHHHHHHHccC
Q 045577          317 -------EII----D-EQTKMKGPFS-A-DELVKCIEVGLLCVQQRIEDWPTMSSVLTMLSNE  365 (392)
Q Consensus       317 -------~~l----d-~~~~~~~~~~-~-~~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~L~~~  365 (392)
                             +++    + +...+.+... . +....++.++..||.++|++||++.+|-..++..
T Consensus       162 ~~~~~~~eii~~~~~~~~~~~rP~i~~~~e~~~~l~~l~~~cw~e~P~~rPs~~~i~~~~~~~  224 (484)
T KOG1023|consen  162 NLVEDPDEIILRVKKGGSNPFRPSIELLNELPPELLLLVARCWEEIPEKRPSIEQIRSKLLTI  224 (484)
T ss_pred             cccCChHHHHHHHHhcCCCCcCcchhhhhhcchHHHHHHHHhcccChhhCccHHHHHhhhhhh
Confidence                   111    1 1111222221 1 2222577788899999999999999999988765

>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain

Probab=98.79  E-value=4.3e-09  Score=93.89  Aligned_cols=73  Identities=19%  Similarity=0.121  Sum_probs=60.3

Q ss_pred             CCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEcCCCCCeEeeeeceE
Q 045577          199 GEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEINPNISDFGPAR  278 (392)
Q Consensus       199 ~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~~~~~~kl~DFGla~  278 (392)
                      +..+++|||++++++......       .....++.+++.++.++|+.   +++|+||||+||++++++.++|+|||++.
T Consensus       104 ~~~~lv~e~~~g~~L~~~~~~-------~~~~~~~~~i~~~l~~lh~~---gi~H~Dl~p~Nill~~~~~~~liDfg~~~  173 (198)
T cd05144         104 NRHAVVMEYIDGVELYRVRVL-------EDPEEVLDEILEEIVKAYKH---GIIHGDLSEFNILVDDDEKIYIIDWPQMV  173 (198)
T ss_pred             CCceEEEEEeCCcchhhcccc-------ccHHHHHHHHHHHHHHHHHC---CCCcCCCCcccEEEcCCCcEEEEECCccc
Confidence            356899999999887543210       22467889999999999997   89999999999999999999999999986


Q ss_pred             EeC
Q 045577          279 IFG  281 (392)
Q Consensus       279 ~~~  281 (392)
                      ...
T Consensus       174 ~~~  176 (198)
T cd05144         174 STD  176 (198)
T ss_pred             cCC
Confidence            543

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom

>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional

Probab=98.79  E-value=2e-09  Score=97.54  Aligned_cols=99  Identities=12%  Similarity=0.084  Sum_probs=68.8

Q ss_pred             CCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEcCCCCCeEeeeeceE
Q 045577          199 GEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEINPNISDFGPAR  278 (392)
Q Consensus       199 ~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~~~~~~kl~DFGla~  278 (392)
                      +..+++|||+++.++.....      .   ......+++.+|..+|+.   +++|||+||+||+++.++ ++++|||..+
T Consensus       116 ~~~~lvmEyi~G~tL~~~~~------~---~~~~~~~i~~~l~~lH~~---gi~H~Dikp~Nili~~~g-i~liDfg~~~  182 (232)
T PRK10359        116 HTYIMLIEYIEGVELNDMPE------I---SEDVKAKIKASIESLHQH---GMVSGDPHKGNFIVSKNG-LRIIDLSGKR  182 (232)
T ss_pred             CCeEEEEEEECCccHHHhhh------c---cHHHHHHHHHHHHHHHHc---CCccCCCChHHEEEeCCC-EEEEECCCcc
Confidence            57899999999988754321      0   123466899999999998   999999999999999888 9999999876


Q ss_pred             EeCCCCcceeceeeecccccCchhHHHHHHHhcCCCccee
Q 045577          279 IFGDQTEEVTGRVIGTQTLKTVPELLQAWKLWSEGDPMEI  318 (392)
Q Consensus       279 ~~~~~~~~~~~~~~gt~~y~a~~~~~~~~diws~G~v~~~  318 (392)
                      ..........        |.....+....|+|++|..+-+
T Consensus       183 ~~~e~~a~d~--------~vler~y~~~~di~~lg~~~~~  214 (232)
T PRK10359        183 CTAQRKAKDR--------IDLERHYGIKNEIKDLGYYLLI  214 (232)
T ss_pred             cccchhhHHH--------HHHHhHhcccccccceeEeehH
Confidence            5431111100        1110111135799999976543

>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated

Probab=98.73  E-value=6.6e-09  Score=106.88  Aligned_cols=70  Identities=20%  Similarity=0.236  Sum_probs=60.0

Q ss_pred             CCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEcCCCCCeEeeeece
Q 045577          198 DGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEINPNISDFGPA  277 (392)
Q Consensus       198 ~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~~~~~~kl~DFGla  277 (392)
                      ....+++|||++++++.....         ....++.+++++|.|||+.   +++|||+||+||++ .++.++|+|||++
T Consensus       408 ~~~~~lv~E~~~g~~L~~~l~---------~~~~~~~~i~~~L~~lH~~---giiHrDlkp~NILl-~~~~~~liDFGla  474 (535)
T PRK09605        408 PEEKTIVMEYIGGKDLKDVLE---------GNPELVRKVGEIVAKLHKA---GIVHGDLTTSNFIV-RDDRLYLIDFGLG  474 (535)
T ss_pred             CCCCEEEEEecCCCcHHHHHH---------HHHHHHHHHHHHHHHHHhC---CCccCCCChHHEEE-ECCcEEEEeCccc
Confidence            346799999999999876443         1467899999999999998   89999999999999 5778999999999


Q ss_pred             EEe
Q 045577          278 RIF  280 (392)
Q Consensus       278 ~~~  280 (392)
                      +..
T Consensus       475 ~~~  477 (535)
T PRK09605        475 KYS  477 (535)
T ss_pred             ccC
Confidence            763

>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=98.72  E-value=1.5e-08  Score=97.58  Aligned_cols=96  Identities=21%  Similarity=0.204  Sum_probs=66.8

Q ss_pred             CeeEEecCccCCCcChhhhhhh-ccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEcCC-----CCCeEee
Q 045577          200 EVFLMFEGIKLPDKSEFTCEFE-CSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAE-----INPNISD  273 (392)
Q Consensus       200 ~~~lv~e~~~~~~l~~~~~~~~-~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~~~-----~~~kl~D  273 (392)
                      -.|+||+.+. ++|........ .......++.|+.|+..+|+++|+.   +++||||||+|+++...     ..+.+.|
T Consensus        95 ~~~iVM~l~G-~sL~dl~~~~~~~~fs~~T~l~ia~q~l~~l~~lH~~---G~iHRDiKp~N~~~g~~~~~~~~~~~llD  170 (322)
T KOG1164|consen   95 FNFIVMSLLG-PSLEDLRKRNPPGRFSRKTVLRIAIQNLNALEDLHSK---GFIHRDIKPENFVVGQSSRSEVRTLYLLD  170 (322)
T ss_pred             eeEEEEeccC-ccHHHHHHhCCCCCcCHhHHHHHHHHHHHHHHHHHhc---CcccCCcCHHHeeecCCCCcccceEEEEe
Confidence            4689988865 45544222211 1224455799999999999999998   99999999999999765     3589999


Q ss_pred             eeceE--EeC-CCCc---ce---eceeeecccccC
Q 045577          274 FGPAR--IFG-DQTE---EV---TGRVIGTQTLKT  299 (392)
Q Consensus       274 FGla~--~~~-~~~~---~~---~~~~~gt~~y~a  299 (392)
                      ||+++  .+. ....   ..   .....||..|.+
T Consensus       171 fGlar~~~~~~~~~~~~~~~r~~~~~~rGT~ry~S  205 (322)
T KOG1164|consen  171 FGLARRFKYVGDSGGNLRPPRPQKGLFRGTLRYAS  205 (322)
T ss_pred             cCCCccccccCCCCcccccCCCCccCCCCcccccc
Confidence            99998  322 1111   01   122458999988

>TIGR03724 arch_bud32 Kae1-associated kinase Bud32

Probab=98.71  E-value=9.8e-09  Score=91.42  Aligned_cols=69  Identities=23%  Similarity=0.295  Sum_probs=58.1

Q ss_pred             CCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEcCCCCCeEeeeeceE
Q 045577          199 GEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEINPNISDFGPAR  278 (392)
Q Consensus       199 ~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~~~~~~kl~DFGla~  278 (392)
                      ...+++|||++++++........        ..++.+++.+|.++|+.   +++|+|++|.||+++ ++.+++.|||+++
T Consensus        70 ~~~~lv~e~~~g~~l~~~~~~~~--------~~~~~~i~~~l~~lH~~---gi~H~Dl~~~Nil~~-~~~~~liDfg~a~  137 (199)
T TIGR03724        70 DNKTIVMEYIEGKPLKDVIEEGN--------DELLREIGRLVGKLHKA---GIVHGDLTTSNIIVR-DDKLYLIDFGLGK  137 (199)
T ss_pred             CCCEEEEEEECCccHHHHHhhcH--------HHHHHHHHHHHHHHHHC---CeecCCCCcceEEEE-CCcEEEEECCCCc
Confidence            45789999999988865432211        16889999999999998   899999999999999 7899999999886


Q ss_pred             E
Q 045577          279 I  279 (392)
Q Consensus       279 ~  279 (392)
                      .
T Consensus       138 ~  138 (199)
T TIGR03724       138 Y  138 (199)
T ss_pred             C
Confidence            5

Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.

>PRK14879 serine/threonine protein kinase; Provisional

Probab=98.68  E-value=1.5e-08  Score=91.05  Aligned_cols=73  Identities=23%  Similarity=0.232  Sum_probs=60.6

Q ss_pred             CCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEcCCCCCeEeeeece
Q 045577          198 DGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEINPNISDFGPA  277 (392)
Q Consensus       198 ~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~~~~~~kl~DFGla  277 (392)
                      .+..+++|||++++++........   .  ....++.+++.+|.++|+.   +++|+|++|.||+++ ++.++|+|||++
T Consensus        71 ~~~~~lv~e~~~G~~L~~~~~~~~---~--~~~~i~~~i~~~l~~lH~~---~i~H~Dl~p~Nil~~-~~~~~liDf~~a  141 (211)
T PRK14879         71 PENFIIVMEYIEGEPLKDLINSNG---M--EELELSREIGRLVGKLHSA---GIIHGDLTTSNMILS-GGKIYLIDFGLA  141 (211)
T ss_pred             CCCCEEEEEEeCCcCHHHHHHhcc---H--HHHHHHHHHHHHHHHHHhC---CcccCCCCcccEEEE-CCCEEEEECCcc
Confidence            356789999999988866432211   1  4678899999999999998   899999999999999 788999999988


Q ss_pred             EE
Q 045577          278 RI  279 (392)
Q Consensus       278 ~~  279 (392)
                      +.
T Consensus       142 ~~  143 (211)
T PRK14879        142 EF  143 (211)
T ss_pred             cC
Confidence            65

>cd05119 RIO RIO kinase family, catalytic domain

Probab=98.65  E-value=2.7e-08  Score=87.61  Aligned_cols=75  Identities=17%  Similarity=0.077  Sum_probs=58.2

Q ss_pred             CeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCc-CCCCceeecccccceeEEcCCCCCeEeeeeceE
Q 045577          200 EVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPE-DSRLEIIHRDHKTSNVLLDAEINPNISDFGPAR  278 (392)
Q Consensus       200 ~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~-~~~~~iiHrDlKp~NIll~~~~~~kl~DFGla~  278 (392)
                      ..+++|||++++.+....... +... .....++.+++.++.++|. .   +++|+|+||+||+++ ++.++++|||.+.
T Consensus        89 ~~~lv~e~~~g~~~~~~~l~~-~~~~-~~~~~~~~~~~~~l~~lh~~~---~ivH~Dl~p~Nili~-~~~~~liDfg~a~  162 (187)
T cd05119          89 RHVLVMEFIGGDGIPAPRLKD-VRLL-EDPEELYDQILELMRKLYREA---GLVHGDLSEYNILVD-DGKVYIIDVPQAV  162 (187)
T ss_pred             CCEEEEEEeCCCCccChhhhh-hhhc-ccHHHHHHHHHHHHHHHhhcc---CcCcCCCChhhEEEE-CCcEEEEECcccc
Confidence            468999999986543311111 1111 3367889999999999998 6   899999999999999 8899999999987


Q ss_pred             Ee
Q 045577          279 IF  280 (392)
Q Consensus       279 ~~  280 (392)
                      ..
T Consensus       163 ~~  164 (187)
T cd05119         163 EI  164 (187)
T ss_pred             cc
Confidence            54

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct

>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed

Probab=98.64  E-value=2.1e-08  Score=92.26  Aligned_cols=70  Identities=20%  Similarity=0.246  Sum_probs=55.0

Q ss_pred             eeEEecCccC-CCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEcCCCCCeEeeeeceEE
Q 045577          201 VFLMFEGIKL-PDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEINPNISDFGPARI  279 (392)
Q Consensus       201 ~~lv~e~~~~-~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~~~~~~kl~DFGla~~  279 (392)
                      .+++||++++ .++.....+ ..  .   -...+.+++.+|.+||+.   +|+||||||.|||++.++.++|+|||.+..
T Consensus       121 ~~lV~e~l~G~~~L~~~l~~-~~--l---~~~~~~~i~~~l~~lH~~---GI~HrDlkp~NILv~~~~~v~LIDfg~~~~  191 (239)
T PRK01723        121 ADILIERIEGARDLVALLQE-AP--L---SEEQWQAIGQLIARFHDA---GVYHADLNAHNILLDPDGKFWLIDFDRGEL  191 (239)
T ss_pred             eeEEEEecCCCCCHHHHHhc-CC--C---CHHHHHHHHHHHHHHHHC---CCCCCCCCchhEEEcCCCCEEEEECCCccc
Confidence            4699999987 466543222 11  1   123467899999999998   999999999999999888999999998865

>PRK10345 hypothetical protein; Provisional

Probab=98.61  E-value=3.2e-08  Score=89.05  Aligned_cols=72  Identities=21%  Similarity=0.290  Sum_probs=51.6

Q ss_pred             CCee-EEecC--ccCCCcChhhhhhhccccchhhhhHHHHHHHhh-hhcCcCCCCceeecccccceeEEcC----CCCCe
Q 045577          199 GEVF-LMFEG--IKLPDKSEFTCEFECSKYSSYVTNILYGIARVI-LYLPEDSRLEIIHRDHKTSNVLLDA----EINPN  270 (392)
Q Consensus       199 ~~~~-lv~e~--~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL-~yLH~~~~~~iiHrDlKp~NIll~~----~~~~k  270 (392)
                      +..| +++||  +..+++.+...+.  . .... ..++.++..++ +|||++   +|+||||||+||+++.    +..++
T Consensus        77 g~v~~~I~e~~G~~~~tL~~~l~~~--~-~~e~-~~~~~~~L~~l~~yLh~~---~IvhrDlKp~NILl~~~~~~~~~~~  149 (210)
T PRK10345         77 GYVYDVIADFDGKPSITLTEFAEQC--R-YEED-VAQLRQLLKKLKRYLLDN---RIVTMELKPQNILCQRISESEVIPV  149 (210)
T ss_pred             eEEEEEEecCCCCcchhHHHHHHcc--c-ccHh-HHHHHHHHHHHHHHHHHC---CEeecCCCHHHEEEeccCCCCCcEE
Confidence            4545 68999  4567887765332  1 2221 34577888787 899998   8999999999999974    34799


Q ss_pred             Eeeeece
Q 045577          271 ISDFGPA  277 (392)
Q Consensus       271 l~DFGla  277 (392)
                      |+||+-+
T Consensus       150 LiDg~G~  156 (210)
T PRK10345        150 VCDNIGE  156 (210)
T ss_pred             EEECCCC
Confidence            9995433

>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

Probab=98.61  E-value=5.2e-08  Score=91.19  Aligned_cols=157  Identities=24%  Similarity=0.308  Sum_probs=107.6

Q ss_pred             CeeEEecCccCCCcChhhhhhh--ccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEcCCC-CCeEeeeec
Q 045577          200 EVFLMFEGIKLPDKSEFTCEFE--CSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEI-NPNISDFGP  276 (392)
Q Consensus       200 ~~~lv~e~~~~~~l~~~~~~~~--~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~~~~-~~kl~DFGl  276 (392)
                      ..+++++++.++.+........  ..........++.|++.++.|+|+.   +++|||+||+||+++... .+++.|||.
T Consensus        72 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~H~~---~~~hrd~kp~nil~~~~~~~~~l~dfg~  148 (384)
T COG0515          72 SLYLVMEYVDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLHSK---GIIHRDIKPENILLDRDGRVVKLIDFGL  148 (384)
T ss_pred             EEEEEEecCCCCcHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeeecCCCCeEEEeccCc
Confidence            3799999999998874333322  1344445788999999999999998   799999999999999988 699999999


Q ss_pred             eEEeCCCCcc-----eeceeeecccccCchhHH---------HHHHHhcCCCcc-eeecccccCCCCC------------
Q 045577          277 ARIFGDQTEE-----VTGRVIGTQTLKTVPELL---------QAWKLWSEGDPM-EIIDEQTKMKGPF------------  329 (392)
Q Consensus       277 a~~~~~~~~~-----~~~~~~gt~~y~a~~~~~---------~~~diws~G~v~-~~ld~~~~~~~~~------------  329 (392)
                      ++.+......     ......|+..|++ |+..         ...|+|+.|+.. +++.+..++....            
T Consensus       149 ~~~~~~~~~~~~~~~~~~~~~~t~~~~~-pe~~~~~~~~~~~~~~D~~s~g~~~~~~~~~~~p~~~~~~~~~~~~~~~~~  227 (384)
T COG0515         149 AKLLPDPGSTSSIPALPSTSVGTPGYMA-PEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNSSATSQTLKII  227 (384)
T ss_pred             ceecCCCCccccccccccccccccccCC-HHHhcCCCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccccHHHHHHHH
Confidence            9866532211     2355789999999 5533         256899888543 2222211111110            


Q ss_pred             ------------CHH----HHHHHHHHHHhhcccCcCCCCCHHHHHH
Q 045577          330 ------------SAD----ELVKCIEVGLLCVQQRIEDWPTMSSVLT  360 (392)
Q Consensus       330 ------------~~~----~~~~~~~i~~~Cl~~dp~~RPsm~eVv~  360 (392)
                                  ...    ....+.++...|+..+|..|.++.+...
T Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~  274 (384)
T COG0515         228 LELPTPSLASPLSPSNPELISKAASDLLKKLLAKDPKNRLSSSSDLS  274 (384)
T ss_pred             HhcCCcccccccCccccchhhHHHHHHHHHHHhcCchhcCCHHHHhh
Confidence                        000    0124556777888888999988776554

>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]

Probab=98.57  E-value=3.2e-08  Score=103.94  Aligned_cols=123  Identities=20%  Similarity=0.230  Sum_probs=84.1

Q ss_pred             HHHhhhhcCcCCCCceeecccccceeEEcCCCCCeEeeeeceEEeC-----CC---------CcceeceeeecccccCch
Q 045577          236 IARVILYLPEDSRLEIIHRDHKTSNVLLDAEINPNISDFGPARIFG-----DQ---------TEEVTGRVIGTQTLKTVP  301 (392)
Q Consensus       236 ia~gL~yLH~~~~~~iiHrDlKp~NIll~~~~~~kl~DFGla~~~~-----~~---------~~~~~~~~~gt~~y~a~~  301 (392)
                      .+.+++|||+.   +|+|||+||.|.++..-|++|+.|||+.+.-.     ..         .+.....++||+.|.| |
T Consensus       152 mvla~Eylh~y---givhrdlkpdnllIT~mGhiKlTDfgLsk~GLms~atnl~eg~I~k~t~Ef~dKqvcgTPeyia-P  227 (1205)
T KOG0606|consen  152 MVLAVEYLHSY---GIVHRDLKPDNLLITSMGHIKLTDFGLSKKGLMSLATNLKEGHIEKDTHEFQDKQVCGTPEYIA-P  227 (1205)
T ss_pred             hhHHhHhhccC---CeecCCCCCCcceeeecccccccchhhhhhhhhhccchhhhcchHHHHHHhhhccccCCccccC-h
Confidence            37899999998   99999999999999999999999999987521     00         0112234689999999 7


Q ss_pred             hHHH------HHHHhcCCCcceee-cccccCCCCCCHHHHHHHHHHHHhhcccCcCCCCCHHHHHHHH
Q 045577          302 ELLQ------AWKLWSEGDPMEII-DEQTKMKGPFSADELVKCIEVGLLCVQQRIEDWPTMSSVLTML  362 (392)
Q Consensus       302 ~~~~------~~diws~G~v~~~l-d~~~~~~~~~~~~~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~L  362 (392)
                      ++..      .+|.|+.|.+++.+ -+...+.++.+++.+..++..-..-.+.|+.--|...+++..|
T Consensus       228 eVilrqgygkpvdwwamGiIlyeFLVgcvpffGdtpeelfg~visd~i~wpE~dea~p~Ea~dli~~L  295 (1205)
T KOG0606|consen  228 EVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFGQVISDDIEWPEEDEALPPEAQDLIEQL  295 (1205)
T ss_pred             hhhhhhccCCCccHHHHHHHHHHHheeeeeccCCCHHHHHhhhhhhhccccccCcCCCHHHHHHHHHH
Confidence            6653      46999999988433 3434566666666666555533333333444444455554444

>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]

Probab=98.53  E-value=1.8e-08  Score=106.10  Aligned_cols=175  Identities=12%  Similarity=0.075  Sum_probs=113.3

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEc
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLD  264 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~  264 (392)
                      +++|.......-.+.-.|+|=+|++....+. .-.+.-+...+ ..-|+.|+..||.-+|..   +|.|+|||.+|||++
T Consensus        80 ~pn~lPfqk~~~t~kAAylvRqyvkhnLyDR-lSTRPFL~~iE-KkWiaFQLL~al~qcH~~---gVcHGDIKsENILiT  154 (1431)
T KOG1240|consen   80 APNCLPFQKVLVTDKAAYLVRQYVKHNLYDR-LSTRPFLVLIE-KKWIAFQLLKALSQCHKL---GVCHGDIKSENILIT  154 (1431)
T ss_pred             CCcccchHHHHHhhHHHHHHHHHHhhhhhhh-hccchHHHHHH-HHHHHHHHHHHHHHHHHc---CccccccccceEEEe
Confidence            7888877655443456788888888544332 21111111112 456899999999999998   999999999999999


Q ss_pred             CCCCCeEeeeeceEEeC--CCCcce----eceeeecccccCch----------------hHHHHHHHhcCCCcc-eee-c
Q 045577          265 AEINPNISDFGPARIFG--DQTEEV----TGRVIGTQTLKTVP----------------ELLQAWKLWSEGDPM-EII-D  320 (392)
Q Consensus       265 ~~~~~kl~DFGla~~~~--~~~~~~----~~~~~gt~~y~a~~----------------~~~~~~diws~G~v~-~~l-d  320 (392)
                      .-..+.|+||.-.|...  ++....    ..+...-..|+|++                .+..+.|+++.||++ |++ +
T Consensus       155 SWNW~~LtDFAsFKPtYLPeDNPadf~fFFDTSrRRtCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~E  234 (1431)
T KOG1240|consen  155 SWNWLYLTDFASFKPTYLPEDNPADFTFFFDTSRRRTCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLE  234 (1431)
T ss_pred             eechhhhhcccccCCccCCCCCcccceEEEecCCceeeecChHhhhccccccccCCcccccChhhhhhhhhHHHHHHHhc
Confidence            99999999998765432  111000    00111112355521                233467999999987 433 3


Q ss_pred             ccccCC----------CCCCHHHHH------HHHHHHHhhcccCcCCCCCHHHHHHHHcc
Q 045577          321 EQTKMK----------GPFSADELV------KCIEVGLLCVQQRIEDWPTMSSVLTMLSN  364 (392)
Q Consensus       321 ~~~~~~----------~~~~~~~~~------~~~~i~~~Cl~~dp~~RPsm~eVv~~L~~  364 (392)
                      +++.+.          +.++.+++.      .+.++++.|++.||++|-++++.++.-.+
T Consensus       235 g~PlF~LSQL~aYr~~~~~~~e~~Le~Ied~~~Rnlil~Mi~rdPs~RlSAedyL~~yrG  294 (1431)
T KOG1240|consen  235 GRPLFTLSQLLAYRSGNADDPEQLLEKIEDVSLRNLILSMIQRDPSKRLSAEDYLQKYRG  294 (1431)
T ss_pred             CCCcccHHHHHhHhccCccCHHHHHHhCcCccHHHHHHHHHccCchhccCHHHHHHhhhc
Confidence            333331          234444444      34468889999999999999999987444

>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=98.48  E-value=6.7e-08  Score=99.95  Aligned_cols=159  Identities=18%  Similarity=0.186  Sum_probs=108.6

Q ss_pred             CCCeeEEecCccCCCcChhhhhhhc-cccchhhhhHHHHHHHhhhhcC-cCCCCceeecccccceeEEcCCC-CCeEeee
Q 045577          198 DGEVFLMFEGIKLPDKSEFTCEFEC-SKYSSYVTNILYGIARVILYLP-EDSRLEIIHRDHKTSNVLLDAEI-NPNISDF  274 (392)
Q Consensus       198 ~~~~~lv~e~~~~~~l~~~~~~~~~-~~~~~~~~~i~~~ia~gL~yLH-~~~~~~iiHrDlKp~NIll~~~~-~~kl~DF  274 (392)
                      ....++..+|..++++........+ .......-.+..|+..++.|+| ..   ++.|||+||+|.+++..+ ..|++||
T Consensus        93 ~~~~~~~~~~s~g~~~f~~i~~~~~~~~~~~~~~~~~~ql~s~l~~~H~~~---~~~h~~ikP~n~~l~~s~~~l~~~df  169 (601)
T KOG0590|consen   93 PRSYLLSLSYSDGGSLFSKISHPDSTGTSSSSASRYLPQLNSGLSYLHPEN---GVTHRDIKPSNSLLDESGSALKIADF  169 (601)
T ss_pred             CcccccccCcccccccccccccCCccCCCCcchhhhhhhhccCccccCccc---ccccCCCCCccchhccCCCcccCCCc
Confidence            3567888999888888775533333 3344446778999999999999 66   899999999999999999 9999999


Q ss_pred             eceEEeCC--CCcceeceeee-cccccCchhHHH-------HHHHhcCCCcce-eecccc--------------------
Q 045577          275 GPARIFGD--QTEEVTGRVIG-TQTLKTVPELLQ-------AWKLWSEGDPME-IIDEQT--------------------  323 (392)
Q Consensus       275 Gla~~~~~--~~~~~~~~~~g-t~~y~a~~~~~~-------~~diws~G~v~~-~ld~~~--------------------  323 (392)
                      |+|..+..  .........+| ++.|+| +|...       ..|+|+.|.++- ++.+..                    
T Consensus       170 ~~At~~~~~~g~~~~~~~~~g~s~~y~a-~E~~~~~~~~~~~~d~~S~g~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~  248 (601)
T KOG0590|consen  170 GLATAYRNKNGAERSLKDRCGSSPPYGA-PEHLSGKAYRGPSVDVWSLGIVLSAMLTGELPWDFPSRKDGRYSSWKSNKG  248 (601)
T ss_pred             hhhccccccCCcceeeecccCCCCCCCC-cccccchhhcCCCcccccccccccccccCCCCccccccccccceeeccccc
Confidence            99987764  34444455678 999999 66543       358999998762 111100                    


Q ss_pred             cCCCCCCHHHHHHHHHHHHhhcccCcCCCCCHHHHHH
Q 045577          324 KMKGPFSADELVKCIEVGLLCVQQRIEDWPTMSSVLT  360 (392)
Q Consensus       324 ~~~~~~~~~~~~~~~~i~~~Cl~~dp~~RPsm~eVv~  360 (392)
                      .+.............++...++..+|+.|.+.+++..
T Consensus       249 ~~~~~~~~~~~~~~~~~l~k~l~~~~~~r~s~~~~~~  285 (601)
T KOG0590|consen  249 RFTQLPWNSISDQAHDLLHKILKENPSNRLSIEELKL  285 (601)
T ss_pred             ccccCccccCChhhhhcccccccCCchhccccccccc
Confidence            0000000011123344455677788899988877654

>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family

Probab=98.46  E-value=2.1e-07  Score=77.85  Aligned_cols=73  Identities=23%  Similarity=0.218  Sum_probs=59.3

Q ss_pred             CCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEcCCCCCeEeeeeceE
Q 045577          199 GEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEINPNISDFGPAR  278 (392)
Q Consensus       199 ~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~~~~~~kl~DFGla~  278 (392)
                      +..+++|||+++..+...        .......++.+++++|.++|.....+++|+|++|.||+++..+.+++.|||.++
T Consensus        66 ~~~~~v~e~~~g~~~~~~--------~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~~~~~~~l~Df~~~~  137 (155)
T cd05120          66 GWSYLLMEWIEGETLDEV--------SEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVDDGKILGIIDWEYAG  137 (155)
T ss_pred             CccEEEEEecCCeecccC--------CHHHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEEECCcEEEEEeccccc
Confidence            468999999988766532        112245678899999999998655579999999999999998899999999876


Q ss_pred             E
Q 045577          279 I  279 (392)
Q Consensus       279 ~  279 (392)
                      .
T Consensus       138 ~  138 (155)
T cd05120         138 Y  138 (155)
T ss_pred             C
Confidence            4

The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves

>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=98.43  E-value=7.1e-07  Score=79.78  Aligned_cols=112  Identities=21%  Similarity=0.213  Sum_probs=74.6

Q ss_pred             CCeeEEecCccCCCcCh--hhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEcCC---CCCeEee
Q 045577          199 GEVFLMFEGIKLPDKSE--FTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAE---INPNISD  273 (392)
Q Consensus       199 ~~~~lv~e~~~~~~l~~--~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~~~---~~~kl~D  273 (392)
                      ..-.+||+... |++..  ..|...-  ....++-++.|+..-++|+|.+   +.|||||||+|+|+.-+   ..+.++|
T Consensus        84 ~ynvlVMdLLG-PsLEdLfnfC~R~f--tmkTvLMLaDQml~RiEyvH~r---~fiHRDIKPdNFLMGlgrh~~kl~LID  157 (341)
T KOG1163|consen   84 DYNVLVMDLLG-PSLEDLFNFCSRRF--TMKTVLMLADQMLSRIEYVHLR---NFIHRDIKPDNFLMGLGRHCNKLYLID  157 (341)
T ss_pred             ccceeeeeccC-ccHHHHHHHHhhhh--hHHhHHHHHHHHHHHHHHHHhh---ccccccCCccceeeccccccceEEEEe
Confidence            44578998864 55544  2244321  2334677789999999999998   79999999999999654   3467999


Q ss_pred             eeceEEeCCCCc---c---eeceeeecccccCc-----hhHHHHHHHhcCCCcc
Q 045577          274 FGPARIFGDQTE---E---VTGRVIGTQTLKTV-----PELLQAWKLWSEGDPM  316 (392)
Q Consensus       274 FGla~~~~~~~~---~---~~~~~~gt~~y~a~-----~~~~~~~diws~G~v~  316 (392)
                      ||+++.+.+...   .   ......||..|.+-     .|-...-|+-|.|-++
T Consensus       158 FGLaKky~d~~t~~HIpyre~r~ltGTaRYASinAh~g~eqSRRDDmeSvgYvL  211 (341)
T KOG1163|consen  158 FGLAKKYRDIRTRQHIPYREDRNLTGTARYASINAHLGIEQSRRDDMESVGYVL  211 (341)
T ss_pred             ccchhhhccccccccCccccCCccceeeeehhhhhhhhhhhhhhhhhhhhccee
Confidence            999987652111   1   11225788888771     2223345677777655

>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=98.41  E-value=1.2e-07  Score=92.26  Aligned_cols=66  Identities=26%  Similarity=0.189  Sum_probs=50.9

Q ss_pred             CCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEcC
Q 045577          198 DGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDA  265 (392)
Q Consensus       198 ~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~~  265 (392)
                      +..++||+|+.....|...+...-...+...+.+|+.||+.||.|||.+|  +|||.||||+|||+-.
T Consensus       158 G~HVCMVfEvLGdnLLklI~~s~YrGlpl~~VK~I~~qvL~GLdYLH~ec--gIIHTDlKPENvLl~~  223 (590)
T KOG1290|consen  158 GQHVCMVFEVLGDNLLKLIKYSNYRGLPLSCVKEICRQVLTGLDYLHREC--GIIHTDLKPENVLLCS  223 (590)
T ss_pred             CcEEEEEehhhhhHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHHHhc--CccccCCCcceeeeec
Confidence            35789999998755554433222223344558999999999999999998  9999999999999843

>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A

Probab=98.40  E-value=3e-07  Score=85.99  Aligned_cols=115  Identities=19%  Similarity=0.117  Sum_probs=68.1

Q ss_pred             hhhHHHHHHHhhhhcCcCCCCceeecccccceeEEcCCCCCeEeeeeceEEeCCCCcceeceeeecccccCchhHH----
Q 045577          229 VTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELL----  304 (392)
Q Consensus       229 ~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~----  304 (392)
                      ++.+..|+.+.+++||..   +++|+||||+|++++.+|.++|.||+.....+...   .. ...+..|.+ ||..    
T Consensus       147 rl~lT~Q~I~lvA~Lh~~---GlVHgdi~~~nfll~~~G~v~Lg~F~~~~r~g~~~---~~-~~~~~~~~P-Pe~~~~~~  218 (288)
T PF14531_consen  147 RLSLTVQMIRLVANLHSY---GLVHGDIKPENFLLDQDGGVFLGDFSSLVRAGTRY---RC-SEFPVAFTP-PELESCAG  218 (288)
T ss_dssp             HHHHHHHHHHHHHHHHHT---TEEEST-SGGGEEE-TTS-EEE--GGGEEETTEEE---EG-GGS-TTTS--HHHHHHHT
T ss_pred             HHHHHHHHHHHHHHHhhc---ceEecccceeeEEEcCCCCEEEcChHHHeecCcee---ec-cCCCcccCC-hhhhhhhc
Confidence            456678999999999998   99999999999999999999999999877643211   11 122344544 5443    


Q ss_pred             ----------HHHHHhcCCCcce-eeccccc------------CCCCCCHHHHHHHHHHHHhhcccCcCCC
Q 045577          305 ----------QAWKLWSEGDPME-IIDEQTK------------MKGPFSADELVKCIEVGLLCVQQRIEDW  352 (392)
Q Consensus       305 ----------~~~diws~G~v~~-~ld~~~~------------~~~~~~~~~~~~~~~i~~~Cl~~dp~~R  352 (392)
                                .+.|.|.+|.++. +.....+            ....+. +-.+.+..++...++.+|++|
T Consensus       219 ~~~~~~~~~t~~~DaW~LG~~ly~lWC~~lPf~~~~~~~~~~~~f~~C~-~~Pe~v~~LI~~lL~~~~~~R  288 (288)
T PF14531_consen  219 QFGQNNAPYTFATDAWQLGITLYSLWCGRLPFGLSSPEADPEWDFSRCR-DMPEPVQFLIRGLLQRNPEDR  288 (288)
T ss_dssp             SCHHSEEEE-HHHHHHHHHHHHHHHHHSS-STCCCGGGSTSGGGGTTSS----HHHHHHHHHHT-SSGGGS
T ss_pred             ccCcccceeeeccCHHHHHHHHHHHHHccCCCCCCCccccccccchhcC-CcCHHHHHHHHHHccCCcccC
Confidence                      3558888887652 1111000            112223 444455556668888888887

>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=98.37  E-value=4.8e-07  Score=84.34  Aligned_cols=115  Identities=22%  Similarity=0.233  Sum_probs=78.4

Q ss_pred             eeEEecCccCCCcCh--hhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEcCCC-----CCeEee
Q 045577          201 VFLMFEGIKLPDKSE--FTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEI-----NPNISD  273 (392)
Q Consensus       201 ~~lv~e~~~~~~l~~--~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~~~~-----~~kl~D  273 (392)
                      --+|||... ++|.+  ..|.+.-  ....+.-++.|+..-++|+|++   .+|.|||||+|+||...+     .+.|.|
T Consensus        99 NiLVidLLG-PSLEDLFD~CgR~F--SvKTV~miA~Qmi~rie~vH~k---~LIYRDIKPdNFLIGrp~~k~~n~IhiiD  172 (449)
T KOG1165|consen   99 NILVIDLLG-PSLEDLFDLCGRRF--SVKTVAMIAKQMITRIEYVHEK---DLIYRDIKPDNFLIGRPGTKDANVIHIID  172 (449)
T ss_pred             hhhhhhhhC-cCHHHHHHHhcCcc--cHHhHHHHHHHHHHHHHHHHhc---ceeecccCccceeecCCCCCCCceEEEEe
Confidence            357888764 44443  3354321  3334677899999999999999   799999999999996543     478999


Q ss_pred             eeceEEeCCCC-cc-----eeceeeecccccC-----chhHHHHHHHhcCCCcc-eeecc
Q 045577          274 FGPARIFGDQT-EE-----VTGRVIGTQTLKT-----VPELLQAWKLWSEGDPM-EIIDE  321 (392)
Q Consensus       274 FGla~~~~~~~-~~-----~~~~~~gt~~y~a-----~~~~~~~~diws~G~v~-~~ld~  321 (392)
                      ||+|+...+.. ..     ......||..||+     .-|-...-|+=++|-++ +++.+
T Consensus       173 FGmAK~YrDp~TkqHIPYrE~KSLsGTARYMSINTHlGrEQSRRDDLEaLGHvFmYFLRG  232 (449)
T KOG1165|consen  173 FGMAKEYRDPKTKQHIPYREHKSLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRG  232 (449)
T ss_pred             ccchhhhcCccccccCccccccccccceeeeEeeccccchhhhhhhHHHhhhhhhhhccC
Confidence            99999876321 11     1123579999999     23444556777777654 44544

>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain

Probab=98.20  E-value=1.5e-06  Score=77.07  Aligned_cols=77  Identities=14%  Similarity=0.051  Sum_probs=55.4

Q ss_pred             CCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhc-CcCCCCceeecccccceeEEcCCCCCeEeeeece
Q 045577          199 GEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYL-PEDSRLEIIHRDHKTSNVLLDAEINPNISDFGPA  277 (392)
Q Consensus       199 ~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yL-H~~~~~~iiHrDlKp~NIll~~~~~~kl~DFGla  277 (392)
                      .+.+++|||+.++.+....-+... ........+..+++.+|.++ |+.   +++|+|+++.||+++ ++.+.|+|||-+
T Consensus        97 ~~~~lvME~Ig~~~~~~~~Lkd~~-~~~~~~~~i~~~i~~~l~~l~H~~---glVHGDLs~~NIL~~-~~~v~iIDF~qa  171 (197)
T cd05146          97 KKHVLVMSFIGDDQVPAPKLKDAK-LNDEEMKNAYYQVLSMMKQLYKEC---NLVHADLSEYNMLWH-DGKVWFIDVSQS  171 (197)
T ss_pred             cCCEEEEEEcCCCCccchhhhccc-cCHHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEE-CCcEEEEECCCc
Confidence            567999999986544321111111 11222456778999999988 776   899999999999997 467999999987


Q ss_pred             EEe
Q 045577          278 RIF  280 (392)
Q Consensus       278 ~~~  280 (392)
                      ...
T Consensus       172 v~~  174 (197)
T cd05146         172 VEP  174 (197)
T ss_pred             eeC
Confidence            654

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.

>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase

Probab=98.18  E-value=2.3e-06  Score=85.60  Aligned_cols=77  Identities=19%  Similarity=0.144  Sum_probs=57.8

Q ss_pred             CCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHH-hhhhcCcCCCCceeecccccceeEEcCCCCCeEeeeece
Q 045577          199 GEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIAR-VILYLPEDSRLEIIHRDHKTSNVLLDAEINPNISDFGPA  277 (392)
Q Consensus       199 ~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~-gL~yLH~~~~~~iiHrDlKp~NIll~~~~~~kl~DFGla  277 (392)
                      +..+++|||+++..+...........   ...+++..++. .+..+|..   +++|+|++|.||+++.++.+++.|||++
T Consensus       231 ~~~vLvmE~i~G~~L~~~~~~~~~~~---~~~~ia~~~~~~~l~ql~~~---g~~H~D~hPgNilv~~~g~i~liDfG~~  304 (437)
T TIGR01982       231 SERVLTMEWIDGIPLSDIAALDEAGL---DRKALAENLARSFLNQVLRD---GFFHADLHPGNIFVLKDGKIIALDFGIV  304 (437)
T ss_pred             CCceEEEEeECCcccccHHHHHhcCC---CHHHHHHHHHHHHHHHHHhC---CceeCCCCcccEEECCCCcEEEEeCCCe
Confidence            56799999999988876432211110   13456665555 36677876   8999999999999999999999999999


Q ss_pred             EEeC
Q 045577          278 RIFG  281 (392)
Q Consensus       278 ~~~~  281 (392)
                      ..+.
T Consensus       305 ~~l~  308 (437)
T TIGR01982       305 GRLS  308 (437)
T ss_pred             eECC
Confidence            8764

This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.

>cd05151 ChoK Choline Kinase (ChoK)

Probab=98.09  E-value=4.1e-06  Score=72.20  Aligned_cols=70  Identities=23%  Similarity=0.114  Sum_probs=53.8

Q ss_pred             CeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCC--CCceeecccccceeEEcCCCCCeEeeeece
Q 045577          200 EVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDS--RLEIIHRDHKTSNVLLDAEINPNISDFGPA  277 (392)
Q Consensus       200 ~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~--~~~iiHrDlKp~NIll~~~~~~kl~DFGla  277 (392)
                      ..+++||++++..+....         .....++.+++++|..||...  ...++|+|++|.||+++ ++.+++.||+.+
T Consensus        65 ~~~lv~e~i~G~~l~~~~---------~~~~~~~~~l~~~l~~LH~~~~~~~~~~HgD~~~~Nil~~-~~~~~liDf~~a  134 (170)
T cd05151          65 TGVLITEFIEGSELLTED---------FSDPENLEKIAKLLKKLHSSPLPDLVPCHNDLLPGNFLLD-DGRLWLIDWEYA  134 (170)
T ss_pred             CCeEEEEecCCCcccccc---------ccCHHHHHHHHHHHHHHhCCCCCCceeecCCCCcCcEEEE-CCeEEEEecccc
Confidence            458999999987765320         112345778999999999873  23469999999999999 568999999987


Q ss_pred             EE
Q 045577          278 RI  279 (392)
Q Consensus       278 ~~  279 (392)
                      ..
T Consensus       135 ~~  136 (170)
T cd05151         135 GM  136 (170)
T ss_pred             cC
Confidence            64

The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph

>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=98.08  E-value=1.1e-05  Score=86.41  Aligned_cols=97  Identities=19%  Similarity=0.072  Sum_probs=69.4

Q ss_pred             CCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEcC-------CCCCeE
Q 045577          199 GEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDA-------EINPNI  271 (392)
Q Consensus       199 ~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~~-------~~~~kl  271 (392)
                      +..++|+||.+-|++....- ..-...++.+..++.|+++-++.||..   +|||+||||.|.+|..       ...++|
T Consensus       767 ~~S~lv~ey~~~Gtlld~~N-~~~~m~e~lv~~~~~qml~ive~lH~~---~IIHgDiKPDNfll~~~~~~~~~~~~l~l  842 (974)
T KOG1166|consen  767 NASVLVSEYSPYGTLLDLIN-TNKVMDEYLVMFFSCQMLRIVEHLHAM---GIIHGDIKPDNFLLRREICADSDSKGLYL  842 (974)
T ss_pred             CcceeeeeccccccHHHhhc-cCCCCCchhhhHHHHHHHHHHHHHHhc---ceecccCCcceeEeecccCCCCcccceEE
Confidence            55689999999998866432 222335666788999999999999998   8999999999999932       345899


Q ss_pred             eeeeceEEeC-CCCcceeceeeecccccC
Q 045577          272 SDFGPARIFG-DQTEEVTGRVIGTQTLKT  299 (392)
Q Consensus       272 ~DFGla~~~~-~~~~~~~~~~~gt~~y~a  299 (392)
                      +|||.+--+. -..........+|-++-.
T Consensus       843 IDfG~siDm~lfp~~~~F~~~~~td~f~C  871 (974)
T KOG1166|consen  843 IDFGRSIDMKLFPDGTKFKAVWHTDLFDC  871 (974)
T ss_pred             EecccceeeeEcCCCcEEeeeeccccchh
Confidence            9999987655 112223333455554444

>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]

Probab=98.05  E-value=4.4e-06  Score=72.41  Aligned_cols=72  Identities=22%  Similarity=0.256  Sum_probs=57.6

Q ss_pred             CCCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEcCCCCCeEeeee
Q 045577          196 CGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEINPNISDFG  275 (392)
Q Consensus       196 C~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~~~~~~kl~DFG  275 (392)
                      +......++|||+++..+.+..-..        ...++..+..-+.-||..   +|+|+||.++||++..+. +.++|||
T Consensus        69 vD~~~~~I~me~I~G~~lkd~l~~~--------~~~~~r~vG~~vg~lH~~---givHGDLTtsNiIl~~~~-i~~IDfG  136 (204)
T COG3642          69 VDPDNGLIVMEYIEGELLKDALEEA--------RPDLLREVGRLVGKLHKA---GIVHGDLTTSNIILSGGR-IYFIDFG  136 (204)
T ss_pred             EcCCCCEEEEEEeCChhHHHHHHhc--------chHHHHHHHHHHHHHHhc---CeecCCCccceEEEeCCc-EEEEECC
Confidence            4456789999999998887544332        245667777778889998   999999999999998764 9999999


Q ss_pred             ceEE
Q 045577          276 PARI  279 (392)
Q Consensus       276 la~~  279 (392)
                      |+..
T Consensus       137 Lg~~  140 (204)
T COG3642         137 LGEF  140 (204)
T ss_pred             cccc
Confidence            9875

>KOG1266 consensus Protein kinase [Signal transduction mechanisms]

Probab=98.03  E-value=2.9e-06  Score=79.15  Aligned_cols=160  Identities=13%  Similarity=0.127  Sum_probs=94.9

Q ss_pred             CCeeEEecCccCCCcChhhhh-hhccc--cchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEcCCCCCeEeeee
Q 045577          199 GEVFLMFEGIKLPDKSEFTCE-FECSK--YSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEINPNISDFG  275 (392)
Q Consensus       199 ~~~~lv~e~~~~~~l~~~~~~-~~~~~--~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~~~~~~kl~DFG  275 (392)
                      .+.-++.|||.-+.+..+..+ +.|..  +.....+++.||..||.|||+ |.++|+|+++.-..|++..++-+|+.--.
T Consensus       145 ~rviFiteymssgs~~~fLkrt~~~~~a~~~~~wkkw~tqIlsal~yLhs-~~PpiihgnlTc~tifiq~ngLIkig~~a  223 (458)
T KOG1266|consen  145 PRVIFITEYMSSGSLKQFLKRTKKNQKALFQKAWKKWCTQILSALSYLHS-CDPPIIHGNLTCDTIFIQHNGLIKIGSVA  223 (458)
T ss_pred             cceEEEEecccchhHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhc-cCCccccCCcchhheeecCCceEEecccC
Confidence            467789999999988775443 33443  444457899999999999999 78899999999999999988888864321


Q ss_pred             ceEEeC---CCCcceeceeeecccccCchhHH------HHHHHhcCCCc-ceeeccccc---CCCCC-CHHHHHHH----
Q 045577          276 PARIFG---DQTEEVTGRVIGTQTLKTVPELL------QAWKLWSEGDP-MEIIDEQTK---MKGPF-SADELVKC----  337 (392)
Q Consensus       276 la~~~~---~~~~~~~~~~~gt~~y~a~~~~~------~~~diws~G~v-~~~ld~~~~---~~~~~-~~~~~~~~----  337 (392)
                      ....-.   ...........+-++|.+ ++..      .+.||++.|.. +++.-....   -.... .++.....    
T Consensus       224 p~s~h~s~~~~~~~Ek~~~~~~~g~~a-~~sg~~tn~~~a~dIy~fgmcAlemailEiq~tnseS~~~~ee~ia~~i~~l  302 (458)
T KOG1266|consen  224 PDSTHPSVNSTREAEKSVNTSLPGFSA-PESGTTTNTTGASDIYKFGMCALEMAILEIQSTNSESKVEVEENIANVIIGL  302 (458)
T ss_pred             ccccchhhhhhhHhhhhccccCCcccc-CCcCcccccccchhhhhhhHHHHHHHHheeccCCCcceeehhhhhhhheeec
Confidence            111100   000111111234456655 3322      36788888721 111111000   00011 11111111    


Q ss_pred             -----HHHHHhhcccCcCCCCCHHHHHH
Q 045577          338 -----IEVGLLCVQQRIEDWPTMSSVLT  360 (392)
Q Consensus       338 -----~~i~~~Cl~~dp~~RPsm~eVv~  360 (392)
                           ...+..|++..|..||+|++++.
T Consensus       303 en~lqr~~i~kcl~~eP~~rp~ar~llf  330 (458)
T KOG1266|consen  303 ENGLQRGSITKCLEGEPNGRPDARLLLF  330 (458)
T ss_pred             cCccccCcCcccccCCCCCCcchhhhhc
Confidence                 12445899999999999998653

>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

Probab=98.01  E-value=5.1e-06  Score=87.81  Aligned_cols=110  Identities=12%  Similarity=0.138  Sum_probs=74.9

Q ss_pred             eeecccccc-eeEEcCCCCCeEeeeeceEEeCCCC-cceeceeeecccccCchhHH------HHHHHhcCCCcc-eeecc
Q 045577          251 IIHRDHKTS-NVLLDAEINPNISDFGPARIFGDQT-EEVTGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIIDE  321 (392)
Q Consensus       251 iiHrDlKp~-NIll~~~~~~kl~DFGla~~~~~~~-~~~~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld~  321 (392)
                      ..|++.+|. |++++.....++.|||.++...... ........||+.|+| ||+.      .+.|+|+.|+++ +++.+
T Consensus       498 ~~~~~~~p~~~~~~~p~~~~~~~~~~~~~~~~~g~~~~~~~~~vGT~~Y~A-PE~l~~~~~~~~~DiwSlG~il~ElltG  576 (669)
T cd05610         498 TPTQKPRPHGNLYQTPKQVKIGTPYRTPKSVRRGAAPVEGERILGTPDYLA-PELLLGKPHGPAVDWWALGVCLFEFLTG  576 (669)
T ss_pred             CCCCCCCCCCceeECCccccccccCCCchhhhcccccccCCceeeCccccC-HHHcCCCCCCcHHHHHHHHHHHHHHHHC
Confidence            345566665 5666777777889999887654221 122334689999999 7754      478999999976 56665


Q ss_pred             cccCCCCCCHHHH------------------HHHHHHHHhhcccCcCCCCCHHHHHHH
Q 045577          322 QTKMKGPFSADEL------------------VKCIEVGLLCVQQRIEDWPTMSSVLTM  361 (392)
Q Consensus       322 ~~~~~~~~~~~~~------------------~~~~~i~~~Cl~~dp~~RPsm~eVv~~  361 (392)
                      .+.+.+....+..                  ..+.+++..|++.+|.+||++.++++.
T Consensus       577 ~~pf~~~~~~~~~~~il~~~~~~p~~~~~~~~~~~~~l~~lL~~dP~~R~ta~e~l~h  634 (669)
T cd05610         577 IPPFNDETPQQVFQNILNRDIPWPEGEEKLSVNAQNAIEILLTMDPTKRAGLKELKQH  634 (669)
T ss_pred             CCCCCCCCHHHHHHHHHhcCCCCCcccccCCHHHHHHHHHHcccChhHCcCHHHHHhC
Confidence            5444333222211                  224457778999999999999999876

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481

>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]

Probab=98.01  E-value=1e-05  Score=81.05  Aligned_cols=169  Identities=20%  Similarity=0.213  Sum_probs=114.9

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhcc-ccchhhhhHHHHHHH----hhhhcCcCCCCceeecccccc
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECS-KYSSYVTNILYGIAR----VILYLPEDSRLEIIHRDHKTS  259 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~-~~~~~~~~i~~~ia~----gL~yLH~~~~~~iiHrDlKp~  259 (392)
                      +..|+|..+..-+++..|+..|++. +.+ ...|...|. .....+..+..+..+    ||.++|..   .++|-|+||.
T Consensus       177 ~~~~v~~~~~~e~~~~lfiqtE~~~-~sl-~~~~~~~~~~~p~~~l~~~~~~~~~~~~~al~~~hs~---~~~~~~~kp~  251 (524)
T KOG0601|consen  177 HENPVRDSPAWEGSGILFIQTELCG-ESL-QSYCHTPCNFLPDNLLWNSLRDWLSRDVTALSHLHSN---NIVHDDLKPA  251 (524)
T ss_pred             cccccccCcccccCCcceeeecccc-chh-HHhhhcccccCCchhhhhHHhhhhhcccccccccCCC---cccccccchh
Confidence            8899998888887889999999998 233 244777776 455557777888878    99999998   8999999999


Q ss_pred             eeEEcCC-CCCeEeeeeceEEeCCCC-cce---eceeeecccccCchhHH-----HHHHHhcCCCcce--ee--------
Q 045577          260 NVLLDAE-INPNISDFGPARIFGDQT-EEV---TGRVIGTQTLKTVPELL-----QAWKLWSEGDPME--II--------  319 (392)
Q Consensus       260 NIll~~~-~~~kl~DFGla~~~~~~~-~~~---~~~~~gt~~y~a~~~~~-----~~~diws~G~v~~--~l--------  319 (392)
                      ||++..+ ...++.|||+...++... ...   ..+..|...|++ ++..     ...|+++.|.+.-  .+        
T Consensus       252 ~i~~~~~~~s~~~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~-ke~~~~l~~~~~di~sl~ev~l~~~l~~~~~~~g  330 (524)
T KOG0601|consen  252 NIFTTSDWTSCKLTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAA-KELLNGLATFASDIFSLGEVILEAILGSHLPSVG  330 (524)
T ss_pred             heecccccceeecCCcceeEEccCCccccceeeeecCCCCceEeC-hhhhccccchHhhhcchhhhhHhhHhhcccccCC
Confidence            9999998 889999999998887332 111   122356677888 6554     3668888876541  00        


Q ss_pred             --cccccCCCCCCHHH-----HHHHHHHHHhhcccCcCCCCCHHHHH
Q 045577          320 --DEQTKMKGPFSADE-----LVKCIEVGLLCVQQRIEDWPTMSSVL  359 (392)
Q Consensus       320 --d~~~~~~~~~~~~~-----~~~~~~i~~~Cl~~dp~~RPsm~eVv  359 (392)
                        +....++..+.+.+     ..++......+++++|..|++.+.+.
T Consensus       331 ~~~~W~~~r~~~ip~e~~~~~s~~l~~~~~~~~d~~~~~~~~~q~~~  377 (524)
T KOG0601|consen  331 KNSSWSQLRQGYIPLEFCEGGSSSLRSVTSQMLDEDPRLRLTAQILT  377 (524)
T ss_pred             CCCCccccccccCchhhhcCcchhhhhHHHHhcCcchhhhhHHHHHh
Confidence              11001111111111     12333466788999999999755443

>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]

Probab=97.87  E-value=1.9e-05  Score=68.43  Aligned_cols=81  Identities=26%  Similarity=0.293  Sum_probs=57.5

Q ss_pred             CCCCCeeEEecCccCC-CcChhhhhh-hccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEcCCCC---Ce
Q 045577          196 CGDGEVFLMFEGIKLP-DKSEFTCEF-ECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEIN---PN  270 (392)
Q Consensus       196 C~~~~~~lv~e~~~~~-~l~~~~~~~-~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~~~~~---~k  270 (392)
                      |+....++.|||+++- .+..+.... .+.........++..|.+.+.-||.+   .++|+||..+||++..++.   +.
T Consensus        80 ~D~~~~~i~ME~~~g~~~vk~~i~~~~~~~~~d~~~~~~~~~iG~~igklH~n---diiHGDLTTSNill~~~~~~~~~~  156 (229)
T KOG3087|consen   80 IDTYGGQIYMEFIDGASTVKDFILSTMEDESEDEGLAELARRIGELIGKLHDN---DIIHGDLTTSNILLRSDGNQITPI  156 (229)
T ss_pred             EecCCCeEEEEeccchhHHHHHHHHHccCcccchhHHHHHHHHHHHHHHhhhC---CeecccccccceEEecCCCcCceE
Confidence            5556789999999873 333322221 12222222367788888999999999   8999999999999976654   46


Q ss_pred             EeeeeceEE
Q 045577          271 ISDFGPARI  279 (392)
Q Consensus       271 l~DFGla~~  279 (392)
                      +.|||++..
T Consensus       157 lIdfgls~~  165 (229)
T KOG3087|consen  157 LIDFGLSSV  165 (229)
T ss_pred             EEeecchhc
Confidence            899999764

>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional

Probab=97.72  E-value=3.4e-05  Score=72.07  Aligned_cols=78  Identities=15%  Similarity=0.273  Sum_probs=57.7

Q ss_pred             CCeeEEecCccCC-CcChhhhhh-hccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEcC-------CCCC
Q 045577          199 GEVFLMFEGIKLP-DKSEFTCEF-ECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDA-------EINP  269 (392)
Q Consensus       199 ~~~~lv~e~~~~~-~l~~~~~~~-~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~~-------~~~~  269 (392)
                      .+.|+++|++++. ++.+..... ...........++.+++..+.-||..   +|+|+|+++.|||++.       +..+
T Consensus       108 ~~s~LVte~l~~~~sL~~~~~~~~~~~~~~~~~~~ll~~la~~i~~LH~~---Gi~HgDL~~~NiLl~~~~~~~~~~~~~  184 (268)
T PRK15123        108 RTSFIITEDLAPTISLEDYCADWATNPPDPRLKRMLIKRVATMVRDMHAA---GINHRDCYICHFLLHLPFPGREEDLKL  184 (268)
T ss_pred             ceeEEEEeeCCCCccHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHHC---cCccCCCChhhEEEeccccCCCCCceE
Confidence            3579999999975 444332211 11112233567889999999999998   9999999999999975       4678


Q ss_pred             eEeeeeceEE
Q 045577          270 NISDFGPARI  279 (392)
Q Consensus       270 kl~DFGla~~  279 (392)
                      .++||+.+..
T Consensus       185 ~LIDl~r~~~  194 (268)
T PRK15123        185 SVIDLHRAQI  194 (268)
T ss_pred             EEEECCcccc
Confidence            8999998754

>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed

Probab=97.52  E-value=0.0001  Score=75.19  Aligned_cols=77  Identities=14%  Similarity=0.116  Sum_probs=49.3

Q ss_pred             CCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHh-hhhcCcCCCCceeecccccceeEEcCCC----CCeEee
Q 045577          199 GEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARV-ILYLPEDSRLEIIHRDHKTSNVLLDAEI----NPNISD  273 (392)
Q Consensus       199 ~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~g-L~yLH~~~~~~iiHrDlKp~NIll~~~~----~~kl~D  273 (392)
                      ++.++||||+++..+.+...-......   ...++...+.. +.-++..   +++|+|+||.||+++.++    .+++.|
T Consensus       234 t~~VLvmE~i~G~~l~d~~~l~~~g~d---~~~la~~~v~~~~~Qif~~---GffHaDpHPGNIlv~~~g~~~~~i~llD  307 (537)
T PRK04750        234 SETVMVMERMYGIPVSDVAALRAAGTD---MKLLAERGVEVFFTQVFRD---GFFHADMHPGNIFVSYDPPENPRYIALD  307 (537)
T ss_pred             CCceEEEeeecCccHHhHHHHHhcCCC---HHHHHHHHHHHHHHHHHhC---CeeeCCCChHHeEEecCCCCCCeEEEEe
Confidence            578999999999887652211111100   11122111111 1112233   899999999999999887    899999


Q ss_pred             eeceEEeC
Q 045577          274 FGPARIFG  281 (392)
Q Consensus       274 FGla~~~~  281 (392)
                      ||++..+.
T Consensus       308 FGivg~l~  315 (537)
T PRK04750        308 FGIVGSLN  315 (537)
T ss_pred             cceEEECC
Confidence            99998765

>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases

Probab=97.49  E-value=0.00011  Score=64.95  Aligned_cols=75  Identities=23%  Similarity=0.176  Sum_probs=46.4

Q ss_pred             CCeeEEecCcc--CCCcChhhhhhhccccchhhhhHHHHHHHhhhh-cCcCCCCceeecccccceeEEcCCCCCeEeeee
Q 045577          199 GEVFLMFEGIK--LPDKSEFTCEFECSKYSSYVTNILYGIARVILY-LPEDSRLEIIHRDHKTSNVLLDAEINPNISDFG  275 (392)
Q Consensus       199 ~~~~lv~e~~~--~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~y-LH~~~~~~iiHrDlKp~NIll~~~~~~kl~DFG  275 (392)
                      .+..+||||++  +..+.........   ......++.++...+.. +|..   +++|+|+.+.||+++++ .+.|+|||
T Consensus        79 ~~~~ivME~I~~~G~~~~~l~~~~~~---~~~~~~~~~~il~~~~~~~~~~---givHGDLs~~NIlv~~~-~~~iIDf~  151 (188)
T PF01163_consen   79 NRNVIVMEYIGEDGVPLPRLKDVDLS---PEEPKELLEEILEEIIKMLHKA---GIVHGDLSEYNILVDDG-KVYIIDFG  151 (188)
T ss_dssp             ETTEEEEE--EETTEEGGCHHHCGGG---GSTHHHHHHHHHHHHHHHHHCT---TEEESS-STTSEEEETT-CEEE--GT
T ss_pred             eCCEEEEEecCCCccchhhHHhcccc---chhHHHHHHHHHHHHHHHHHhc---CceecCCChhhEEeecc-eEEEEecC
Confidence            35689999999  3333221111100   12245566777775555 4566   99999999999999987 99999999


Q ss_pred             ceEEe
Q 045577          276 PARIF  280 (392)
Q Consensus       276 la~~~  280 (392)
                      .+...
T Consensus       152 qav~~  156 (188)
T PF01163_consen  152 QAVDS  156 (188)
T ss_dssp             TEEET
T ss_pred             cceec
Confidence            88754

Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.

>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases

Probab=97.48  E-value=0.00013  Score=65.60  Aligned_cols=76  Identities=25%  Similarity=0.334  Sum_probs=57.8

Q ss_pred             CeeEEecCccCC-CcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEcCCC---CCeEeeee
Q 045577          200 EVFLMFEGIKLP-DKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEI---NPNISDFG  275 (392)
Q Consensus       200 ~~~lv~e~~~~~-~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~~~~---~~kl~DFG  275 (392)
                      ..++++|++++. ++........- ........++.+++..+.-||+.   +|+|+|+++.|||++.+.   .+.++||+
T Consensus        91 ~s~lite~l~~~~~L~~~~~~~~~-~~~~~~~~ll~~l~~~i~~lH~~---gi~H~Dl~~~NILv~~~~~~~~~~lIDld  166 (206)
T PF06293_consen   91 RSYLITEALPGAQDLRDLLQQWEQ-LDPSQRRELLRALARLIAKLHDA---GIYHGDLNPSNILVDPDDGQYRFYLIDLD  166 (206)
T ss_pred             eEEEEEEeCCCcccHHHHHHhhcc-cchhhHHHHHHHHHHHHHHHHHC---cCCCCCCCcccEEEeCCCCceeEEEEcch
Confidence            568999999864 45443332111 22233577889999999999998   999999999999998876   78899999


Q ss_pred             ceEE
Q 045577          276 PARI  279 (392)
Q Consensus       276 la~~  279 (392)
                      -++.
T Consensus       167 ~~~~  170 (206)
T PF06293_consen  167 RMRF  170 (206)
T ss_pred             hcee
Confidence            7765

Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane

>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]

Probab=97.06  E-value=0.00072  Score=67.99  Aligned_cols=91  Identities=13%  Similarity=0.008  Sum_probs=67.5

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEc
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLD  264 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~  264 (392)
                      +..-+|+....-.....|+.-||+++++......-. -...+...+++..|++.++.++|+.   ..+|+|+||+||++.
T Consensus       325 ~~~~~g~~~~W~~~r~~~ip~e~~~~~s~~l~~~~~-~~~d~~~~~~~~~q~~~~l~~i~s~---~~~~~d~~psni~i~  400 (524)
T KOG0601|consen  325 HLPSVGKNSSWSQLRQGYIPLEFCEGGSSSLRSVTS-QMLDEDPRLRLTAQILTALNVIHSK---LFVHLDVKPSNILIS  400 (524)
T ss_pred             ccccCCCCCCccccccccCchhhhcCcchhhhhHHH-HhcCcchhhhhHHHHHhccccccch---hhhcccccccceeec
Confidence            444444444444456788999999988876644111 1113333688899999999999988   899999999999998


Q ss_pred             CC-CCCeEeeeeceEE
Q 045577          265 AE-INPNISDFGPARI  279 (392)
Q Consensus       265 ~~-~~~kl~DFGla~~  279 (392)
                      .+ +..++.|||+...
T Consensus       401 ~~~~~~~~~~~~~~t~  416 (524)
T KOG0601|consen  401 NDGFFSKLGDFGCWTR  416 (524)
T ss_pred             cchhhhhccccccccc
Confidence            76 8889999998864

>PF06176 WaaY: Lipopolysaccharide core biosynthesis protein (WaaY); InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY)

Probab=96.78  E-value=0.0012  Score=59.29  Aligned_cols=68  Identities=19%  Similarity=0.186  Sum_probs=50.6

Q ss_pred             CCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEcCCCCCeEeeeeceE
Q 045577          199 GEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEINPNISDFGPAR  278 (392)
Q Consensus       199 ~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~~~~~~kl~DFGla~  278 (392)
                      .+.+++|||+++-.+.+...-.         -.+...+..++.-+|+.   ++.|+|..|.|++++.+ .+++.||+..+
T Consensus       116 ~~~~ll~EYIeG~~l~d~~~i~---------e~~~~ki~~~ikqlH~~---G~~HGD~hpgNFlv~~~-~i~iID~~~k~  182 (229)
T PF06176_consen  116 SSYVLLMEYIEGVELNDIEDID---------EDLAEKIVEAIKQLHKH---GFYHGDPHPGNFLVSNN-GIRIIDTQGKR  182 (229)
T ss_pred             eEEEEEEEEecCeecccchhcC---------HHHHHHHHHHHHHHHHc---CCccCCCCcCcEEEECC-cEEEEECcccc
Confidence            3567899999987765422110         12445567788899998   99999999999999865 58999998665


Q ss_pred             E
Q 045577          279 I  279 (392)
Q Consensus       279 ~  279 (392)
                      .
T Consensus       183 ~  183 (229)
T PF06176_consen  183 M  183 (229)
T ss_pred             c
Confidence            3

The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process

>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]

Probab=96.72  E-value=0.0019  Score=69.03  Aligned_cols=127  Identities=19%  Similarity=0.221  Sum_probs=89.6

Q ss_pred             CCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEcCCCCCeEeeeece
Q 045577          198 DGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEINPNISDFGPA  277 (392)
Q Consensus       198 ~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~~~~~~kl~DFGla  277 (392)
                      ....+++++|..++++........|...+. ....+..+...++|||..   .+.|||++|.|++...++..+++|||+.
T Consensus       876 rsP~~L~~~~~~~~~~~Skl~~~~~~saep-aRs~i~~~vqs~e~L~s~---~r~h~~~~p~~~l~~~~gh~~l~~~~t~  951 (1205)
T KOG0606|consen  876 RSPLPLVGHYLNGGDLPSKLHNSGCLSAEP-ARSPILERVQSLESLHSS---LRKHRDLKPDSLLIAYDGHRPLTDFGTL  951 (1205)
T ss_pred             CCCcchhhHHhccCCchhhhhcCCCccccc-ccchhHHHHhhhhccccc---hhhcccccccchhhcccCCcccCccccc
Confidence            457899999999999888777666665443 445566678899999987   6899999999999999999999999854


Q ss_pred             EEeCC---C--C---------------------c----ceeceeeecccccCchhHH------HHHHHhcCCCcc-eeec
Q 045577          278 RIFGD---Q--T---------------------E----EVTGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIID  320 (392)
Q Consensus       278 ~~~~~---~--~---------------------~----~~~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld  320 (392)
                      ...+.   .  .                     .    .......||+.|.+ |+..      .+.|.|+.|..+ +.+.
T Consensus       952 ~~vg~~~p~~~~sg~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~t~~~la-Pe~~lg~~hgs~ad~~~~g~~l~e~l~ 1030 (1205)
T KOG0606|consen  952 SKVGLIPPTTDLSGPSSSGTPRRLSRSERRPQLSADEARRKHAVVGTPDYLA-PEILLGRRHGSAADWWSSGVCLFEVLT 1030 (1205)
T ss_pred             cccccccCcCCcccccccCccccccccccccccccchhhccccccCCCcccC-CcccccccCCCcchhhhhhhhhhhhhc
Confidence            33210   0  0                     0    01223568889998 5544      367899998654 6666


Q ss_pred             ccccCCCCC
Q 045577          321 EQTKMKGPF  329 (392)
Q Consensus       321 ~~~~~~~~~  329 (392)
                      +.+.+..+.
T Consensus      1031 g~pp~na~t 1039 (1205)
T KOG0606|consen 1031 GIPPFNAET 1039 (1205)
T ss_pred             CCCCCCCcc
Confidence            544444433

>smart00108 B_lectin Bulb-type mannose-specific lectin

Probab=96.71  E-value=0.0032  Score=50.82  Aligned_cols=37  Identities=30%  Similarity=0.469  Sum_probs=28.5

Q ss_pred             eEEEecCCCCCC-CceEEEecCCCeEEEeccCCCCCceEEee
Q 045577           89 IIWNVILPRATG-SPALQLLVAGNLVLREFSLSHSEGYLWES  129 (392)
Q Consensus        89 ~~w~~~~~~~~~-~~~~~l~d~Gnlvl~~~~~~~~~~~~Wqs  129 (392)
                      ++|++++..... ...+.|.++|||||.+.+    +.++|+|
T Consensus        42 ~vW~snt~~~~~~~~~l~l~~dGnLvl~~~~----g~~vW~S   79 (114)
T smart00108       42 VVWVANRDNPVSDSCTLTLQSDGNLVLYDGD----GRVVWSS   79 (114)
T ss_pred             EEEECCCCCCCCCCEEEEEeCCCCEEEEeCC----CCEEEEe
Confidence            799999754322 357889999999998644    5789998

>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins

Probab=96.70  E-value=0.0021  Score=57.54  Aligned_cols=31  Identities=23%  Similarity=0.324  Sum_probs=26.3

Q ss_pred             CceeecccccceeEEcC--CCCCeEeeeeceEE
Q 045577          249 LEIIHRDHKTSNVLLDA--EINPNISDFGPARI  279 (392)
Q Consensus       249 ~~iiHrDlKp~NIll~~--~~~~kl~DFGla~~  279 (392)
                      ..++|+|+.+.||+++.  +..+.|.||+.+..
T Consensus       174 ~~l~HgD~~~~Nil~~~~~~~~~~iID~e~~~~  206 (223)
T cd05154         174 PGLVHGDYRLGNVLFHPDEPRVVAVLDWELATL  206 (223)
T ss_pred             cEEEECCCCcccEEEcCCCCcEEEEEecccccc
Confidence            47899999999999988  55678999987753

This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain

>cd00028 B_lectin Bulb-type mannose-specific lectin

Probab=96.69  E-value=0.003  Score=51.12  Aligned_cols=41  Identities=27%  Similarity=0.396  Sum_probs=30.7

Q ss_pred             ceEEEecCCCC-CCCceEEEecCCCeEEEeccCCCCCceEEeeecC
Q 045577           88 GIIWNVILPRA-TGSPALQLLVAGNLVLREFSLSHSEGYLWESFDS  132 (392)
Q Consensus        88 ~~~w~~~~~~~-~~~~~~~l~d~Gnlvl~~~~~~~~~~~~Wqsfd~  132 (392)
                      +++|++|+... .....+.|.++|||||.+.+    +.++|+|--.
T Consensus        42 ~~vW~snt~~~~~~~~~l~l~~dGnLvl~~~~----g~~vW~S~~~   83 (116)
T cd00028          42 TVVWVANRDNPSGSSCTLTLQSDGNLVIYDGS----GTVVWSSNTT   83 (116)
T ss_pred             eEEEECCCCCCCCCCEEEEEecCCCeEEEcCC----CcEEEEeccc
Confidence            47999997542 33557889999999997644    5789997643

The domain contains a three-fold internal repeat (beta-prism architecture). The consensus sequence motif QXDXNXVXY is involved in alpha-D-mannose recognition. Lectins are carbohydrate-binding proteins which specifically recognize diverse carbohydrates and mediate a wide variety of biological processes, such as cell-cell and host-pathogen interactions, serum glycoprotein turnover, and innate immune responses.

>KOG1243 consensus Protein kinase [General function prediction only]

Probab=96.55  E-value=0.0071  Score=61.97  Aligned_cols=87  Identities=13%  Similarity=0.178  Sum_probs=65.4

Q ss_pred             CCCccccccCcCCCCCeeEEecCccC-CCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEE
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKL-PDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLL  263 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~-~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll  263 (392)
                      |++..+.....-+++..|+|.|.+.- +...   .+..    ...+--.+.||++||.|||++|  +++|+++.-.-|++
T Consensus        68 HP~Il~yL~t~e~~~~~ylvTErV~Pl~~~l---k~l~----~~~v~~Gl~qIl~AL~FL~~d~--~lvHgNv~~~SVfV  138 (690)
T KOG1243|consen   68 HPNILSYLDTTEEEGTLYLVTERVRPLETVL---KELG----KEEVCLGLFQILAALSFLNDDC--NLVHGNVCKDSVFV  138 (690)
T ss_pred             CchhhhhhhhhcccCceEEEeeccccHHHHH---HHhH----HHHHHHHHHHHHHHHHHHhccC--CeeeccEeeeeEEE
Confidence            77777777666667789999999862 2111   1111    1112335789999999999877  89999999999999


Q ss_pred             cCCCCCeEeeeeceEEe
Q 045577          264 DAEINPNISDFGPARIF  280 (392)
Q Consensus       264 ~~~~~~kl~DFGla~~~  280 (392)
                      +..|+-||.+|-++...
T Consensus       139 n~~GeWkLggle~v~~~  155 (690)
T KOG1243|consen  139 NESGEWKLGGLELVSKA  155 (690)
T ss_pred             cCCCcEEEeeeEEEecc
Confidence            99999999999887654

>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=96.33  E-value=0.0021  Score=63.26  Aligned_cols=33  Identities=15%  Similarity=0.149  Sum_probs=26.0

Q ss_pred             CCHHHHHHHHHHHHhhcccCcCCCCCHHHHHHH
Q 045577          329 FSADELVKCIEVGLLCVQQRIEDWPTMSSVLTM  361 (392)
Q Consensus       329 ~~~~~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~  361 (392)
                      ++.++...+.++..-+++.+|++|||+.+.++.
T Consensus       518 ~s~e~A~~fsdFL~PmLef~PeKR~tA~~cl~h  550 (590)
T KOG1290|consen  518 WSEEDAQQFSDFLSPMLEFDPEKRPTAAQCLKH  550 (590)
T ss_pred             CCHHHHHHHHHHHHHHHhcCccccccHHHHhcC
Confidence            344555567777789999999999999988854

>KOG2137 consensus Protein kinase [Signal transduction mechanisms]

Probab=96.16  E-value=0.0056  Score=62.90  Aligned_cols=126  Identities=16%  Similarity=0.159  Sum_probs=78.6

Q ss_pred             HHHHHHhhhhcCcCCCCceeecccccceeEEcCCCCCeEeeeeceEEeCCCCcc--------eeceeeecccccCchhHH
Q 045577          233 LYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEINPNISDFGPARIFGDQTEE--------VTGRVIGTQTLKTVPELL  304 (392)
Q Consensus       233 ~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~~~--------~~~~~~gt~~y~a~~~~~  304 (392)
                      +.+++.||.|+|...  +++|++|.|++|.++..+.-||+.|+.+.........        ......-...|.+ ||+.
T Consensus       105 l~~v~dgl~flh~sA--k~VH~ni~p~~i~~na~~~wkl~Gf~f~v~~~~~~~~p~~~yd~~lp~~~~~~~~f~a-pE~~  181 (700)
T KOG2137|consen  105 LGNVADGLAFLHRSA--KVVHGNIQPEAIVVNANGDWKLAGFSFCVNANGPTEYPFSEYDPPLPLLLQPHLNFLA-PEYL  181 (700)
T ss_pred             hhcccchhhhhccCc--ceeecccchhheeeccCcceeeccchhhhccCCCCccccccCCCCCChhhccCccccc-chhh
Confidence            456679999999876  8999999999999999999999999877654321110        0001223345666 5554


Q ss_pred             ------HHHHHhcCCCcceeec-ccccCC-CC-------------------CCHHHHHHHHHHHHhhcccCcCCCCCHHH
Q 045577          305 ------QAWKLWSEGDPMEIID-EQTKMK-GP-------------------FSADELVKCIEVGLLCVQQRIEDWPTMSS  357 (392)
Q Consensus       305 ------~~~diws~G~v~~~ld-~~~~~~-~~-------------------~~~~~~~~~~~i~~~Cl~~dp~~RPsm~e  357 (392)
                            .+.|.++.|++.+.+. ++..+. ..                   +..+...++.+-..+.+..++..||++.+
T Consensus       182 ~~~~~~~~sd~fSlG~li~~i~~~gk~i~~a~~~~~~~~~~~~~~~~~~~~~s~~~p~el~~~l~k~l~~~~~~rp~~~~  261 (700)
T KOG2137|consen  182 LGTTNTPASDVFSLGVLIYTIYNGGKSIIAANGGLLSYSFSRNLLNAGAFGYSNNLPSELRESLKKLLNGDSAVRPTLDL  261 (700)
T ss_pred             ccccccccccceeeeeEEEEEecCCcchhhccCCcchhhhhhcccccccccccccCcHHHHHHHHHHhcCCcccCcchhh
Confidence                  2668899998775443 211110 00                   01111223344444678889999997766


Q ss_pred             HHHH
Q 045577          358 VLTM  361 (392)
Q Consensus       358 Vv~~  361 (392)
                      +...
T Consensus       262 l~~~  265 (700)
T KOG2137|consen  262 LLSI  265 (700)
T ss_pred             hhcc
Confidence            5543

>PRK09902 hypothetical protein; Provisional

Probab=96.11  E-value=0.0085  Score=53.69  Aligned_cols=75  Identities=11%  Similarity=0.089  Sum_probs=54.3

Q ss_pred             CeeEEecCccC-CCcChhhhhhhccc--cchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEcCCCC--CeEeee
Q 045577          200 EVFLMFEGIKL-PDKSEFTCEFECSK--YSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEIN--PNISDF  274 (392)
Q Consensus       200 ~~~lv~e~~~~-~~l~~~~~~~~~~~--~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~~~~~--~kl~DF  274 (392)
                      ..++|.|.+.+ .++... +......  .......++.+++..+.-||+.   ++.|+|+-+.||+++.++.  ++++||
T Consensus        99 rA~LVTe~L~g~~~L~~~-l~~~~~~~~~~~~k~~il~~va~~ia~LH~~---Gv~Hgdly~khIll~~~g~~~v~lIDl  174 (216)
T PRK09902         99 RALLVTEDMAGFISIADW-YAQHAVSPYSDEVRQAMLKAVALAFKKMHSV---NRQHGCCYVRHIYVKTEGKAEAGFLDL  174 (216)
T ss_pred             EEEEEEEeCCCCccHHHH-HhcCCcCCcchHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHhheeecCCCCeeEEEEEh
Confidence            47899997763 233332 3222221  2223467899999999999998   9999999999999986666  888998


Q ss_pred             eceE
Q 045577          275 GPAR  278 (392)
Q Consensus       275 Gla~  278 (392)
                      --++
T Consensus       175 Ek~r  178 (216)
T PRK09902        175 EKSR  178 (216)
T ss_pred             hccc
Confidence            7554

>PF01453 B_lectin: D-mannose binding lectin; InterPro: IPR001480 A bulb lectin super-family (Amaryllidaceae, Orchidaceae and Aliaceae) contains a ~115-residue-long domain whose overall three dimensional fold is very similar to that of [, ]: Dictyostelium discoideum comitin, an actin binding protein Curculigo latifolia curculin, a sweet tasting and taste-modifying protein This domain generally binds mannose, but in at least one protein, curculin, it is apparently devoid of mannose-binding activity

Probab=95.36  E-value=0.013  Score=47.35  Aligned_cols=38  Identities=29%  Similarity=0.501  Sum_probs=22.2

Q ss_pred             ceEEEecCCCCC----CCceEEEecCCCeEEEeccCCCCCceEEee
Q 045577           88 GIIWNVILPRAT----GSPALQLLVAGNLVLREFSLSHSEGYLWES  129 (392)
Q Consensus        88 ~~~w~~~~~~~~----~~~~~~l~d~Gnlvl~~~~~~~~~~~~Wqs  129 (392)
                      ++||.+|....-    +.....|.++|||||.+..    +.++|+|
T Consensus         3 tvvW~an~~~p~~~~s~~~~L~l~~dGnLvl~~~~----~~~iWss   44 (114)
T PF01453_consen    3 TVVWVANRNSPLTSSSGNYTLILQSDGNLVLYDSN----GSVIWSS   44 (114)
T ss_dssp             -------TTEEEEECETTEEEEEETTSEEEEEETT----TEEEEE-
T ss_pred             ccccccccccccccccccccceECCCCeEEEEcCC----CCEEEEe
Confidence            579999864322    3467899999999998644    5679999

Each bulb-type lectin domain consists of three sequential beta-sheet subdomains (I, II, III) that are inter-related by pseudo three-fold symmetry. The three subdomains are flat four-stranded, antiparrallel beta-sheets. Together they form a 12-stranded beta-barrel in which the barrel axis coincides with the pseudo 3-fold axis.; GO: 0005529 sugar binding; PDB: 3M7H_A 3M7J_B 3MEZ_D 1DLP_A 1BWU_D 1KJ1_A 1B2P_A 1XD6_A 2DPF_C 2D04_B ....

>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]

Probab=94.81  E-value=0.03  Score=51.84  Aligned_cols=69  Identities=14%  Similarity=0.192  Sum_probs=44.5

Q ss_pred             CCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEcCCCCCeEeeeec
Q 045577          199 GEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEINPNISDFGP  276 (392)
Q Consensus       199 ~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~~~~~~kl~DFGl  276 (392)
                      +...++||++++-.+....-  .........-.|+..+..+.    ..   +++|+|+.+=||++++++.+.++||--
T Consensus       180 nRHaVvMe~ieG~eL~~~r~--~~en~~~il~~il~~~~~~~----~~---GiVHGDlSefNIlV~~dg~~~vIDwPQ  248 (304)
T COG0478         180 NRHAVVMEYIEGVELYRLRL--DVENPDEILDKILEEVRKAY----RR---GIVHGDLSEFNILVTEDGDIVVIDWPQ  248 (304)
T ss_pred             ccceeeeehcccceeecccC--cccCHHHHHHHHHHHHHHHH----Hc---CccccCCchheEEEecCCCEEEEeCcc
Confidence            56789999999755543210  01111121223333333332    32   799999999999999999999999853

>PF12260 PIP49_C: Protein-kinase domain of FAM69; InterPro: IPR022049 Family with sequence similarity 69 has three members (A, B and C)

Probab=94.71  E-value=0.049  Score=48.11  Aligned_cols=79  Identities=9%  Similarity=-0.047  Sum_probs=58.6

Q ss_pred             eeEEecCccCCCcChh--hhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEcCCCCCeEeeeeceE
Q 045577          201 VFLMFEGIKLPDKSEF--TCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEINPNISDFGPAR  278 (392)
Q Consensus       201 ~~lv~e~~~~~~l~~~--~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~~~~~~kl~DFGla~  278 (392)
                      .+++.||+..+.+...  .-.+.-...+..+.+|+.++.+.+.++++.....+.-+|++++|+-+++++.+|+.|...+.
T Consensus        31 ~~~v~E~~~~~~~~~~~~~l~~~~~~~w~~R~~iA~~lL~~l~~l~~~~~~~~~lcDv~~~nfgv~~~~~lk~iDld~v~  110 (188)
T PF12260_consen   31 RFYVVEYVGAGSLYGIYRPLSQFLQSPWEQRAKIALQLLELLEELDHGPLGFFYLCDVSPDNFGVNDDGRLKLIDLDDVF  110 (188)
T ss_pred             CEEEEEeecCccccccccccccccccCHHHHHHHHHHHHHHHHHHhcCCCCcEEEeecchHHeEEeCCCcEEEEechhcc
Confidence            3779999986544211  00011123566689999999999999988554468889999999999999999999988665


Q ss_pred             E
Q 045577          279 I  279 (392)
Q Consensus       279 ~  279 (392)
                      .
T Consensus       111 ~  111 (188)
T PF12260_consen  111 V  111 (188)
T ss_pred             h
Confidence            4

Proteins in this uncharacterised family are described as transmembrane proteins.

>COG1718 RIO1 Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning]

Probab=93.42  E-value=0.08  Score=48.51  Aligned_cols=77  Identities=16%  Similarity=0.118  Sum_probs=47.3

Q ss_pred             CCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEcCCCCCeEeeeeceE
Q 045577          199 GEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEINPNISDFGPAR  278 (392)
Q Consensus       199 ~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~~~~~~kl~DFGla~  278 (392)
                      -+.-++|||+.......-.-+....... ....+..++.+.+.-|-..+  +++|+||..=|||+. ++.+.|+|+|-|.
T Consensus       139 ~~nVLvMEfIg~~g~pAP~LkDv~~e~~-e~~~~~~~~v~~~~~l~~~a--~LVHgDLSEyNiL~~-~~~p~iID~~QaV  214 (268)
T COG1718         139 RNNVLVMEFIGDDGLPAPRLKDVPLELE-EAEGLYEDVVEYMRRLYKEA--GLVHGDLSEYNILVH-DGEPYIIDVSQAV  214 (268)
T ss_pred             cCCeEEEEeccCCCCCCCCcccCCcCch-hHHHHHHHHHHHHHHHHHhc--CcccccchhhheEEE-CCeEEEEECcccc
Confidence            4568999999754221100000000011 13344555556655554423  899999999999999 7899999998765


Q ss_pred             E
Q 045577          279 I  279 (392)
Q Consensus       279 ~  279 (392)
                      .
T Consensus       215 ~  215 (268)
T COG1718         215 T  215 (268)
T ss_pred             c
Confidence            4

>KOG1235 consensus Predicted unusual protein kinase [General function prediction only]

Probab=91.44  E-value=0.4  Score=49.01  Aligned_cols=78  Identities=14%  Similarity=0.138  Sum_probs=48.3

Q ss_pred             CCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEcC----CCCCeEeee
Q 045577          199 GEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDA----EINPNISDF  274 (392)
Q Consensus       199 ~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~~----~~~~kl~DF  274 (392)
                      +...++||||+|.-+.+.+.-..-....   .+++..+.++...  .-...+.+|+|=.|.||++..    ++.+.+.||
T Consensus       275 t~RVLtME~~~G~~i~Dl~~i~~~gi~~---~~i~~~l~~~~~~--qIf~~GffHaDPHPGNilv~~~~~~~~~ivllDh  349 (538)
T KOG1235|consen  275 TKRVLTMEYVDGIKINDLDAIDKRGISP---HDILNKLVEAYLE--QIFKTGFFHADPHPGNILVRPNPEGDEEIVLLDH  349 (538)
T ss_pred             cceEEEEEecCCccCCCHHHHHHcCCCH---HHHHHHHHHHHHH--HHHhcCCccCCCCCCcEEEecCCCCCccEEEEcc
Confidence            5789999999987666532211111111   1233333332111  111127999999999999984    667899999


Q ss_pred             eceEEeC
Q 045577          275 GPARIFG  281 (392)
Q Consensus       275 Gla~~~~  281 (392)
                      |+.....
T Consensus       350 Gl~~~is  356 (538)
T KOG1235|consen  350 GLYAVIS  356 (538)
T ss_pred             ccccccc
Confidence            9987654

>COG0661 AarF Predicted unusual protein kinase [General function prediction only]

Probab=90.73  E-value=0.46  Score=48.59  Aligned_cols=77  Identities=18%  Similarity=0.156  Sum_probs=50.0

Q ss_pred             CCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHh-hhhcCcCCCCceeecccccceeEEcCCCCCeEeeeece
Q 045577          199 GEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARV-ILYLPEDSRLEIIHRDHKTSNVLLDAEINPNISDFGPA  277 (392)
Q Consensus       199 ~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~g-L~yLH~~~~~~iiHrDlKp~NIll~~~~~~kl~DFGla  277 (392)
                      ++..++|||++|--+.+..--......   ...++.-++++ +..+-..   +..|.|..|.||+++.++..-+.|||+.
T Consensus       239 ~~~VLtmE~i~Gi~i~d~~~l~~~g~d---~k~ia~~~~~~f~~q~~~d---gffHaDpHpGNi~v~~~g~i~~lDfGi~  312 (517)
T COG0661         239 TRRVLTMEWIDGIKISDIAALKSAGID---RKELAELLVRAFLRQLLRD---GFFHADPHPGNILVRSDGRIVLLDFGIV  312 (517)
T ss_pred             CCcEEEEEeeCCEecccHHHHHhcCCC---HHHHHHHHHHHHHHHHHhc---CccccCCCccceEEecCCcEEEEcCcce
Confidence            678999999997655553211111111   12233333322 2222223   7999999999999999999999999998


Q ss_pred             EEeC
Q 045577          278 RIFG  281 (392)
Q Consensus       278 ~~~~  281 (392)
                      ..+.
T Consensus       313 g~l~  316 (517)
T COG0661         313 GRLD  316 (517)
T ss_pred             ecCC
Confidence            7764

>KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification]

Probab=86.33  E-value=1.2  Score=45.14  Aligned_cols=80  Identities=6%  Similarity=0.060  Sum_probs=58.4

Q ss_pred             CCeeEEecCccCCCcChhh-hh--------------hhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEE
Q 045577          199 GEVFLMFEGIKLPDKSEFT-CE--------------FECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLL  263 (392)
Q Consensus       199 ~~~~lv~e~~~~~~l~~~~-~~--------------~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll  263 (392)
                      ..+.+|++|.+........ ..              +.-...+..++.++.|+..||.++|+.   ++.-+-|.+.+|++
T Consensus       350 ~SlvlvYDYyP~s~TL~d~~F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sIHss---GLAck~L~~~kIlv  426 (655)
T KOG3741|consen  350 LSLVLVYDYYPSSPTLYDLYFANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAALYSIHSS---GLACKTLDLKKILV  426 (655)
T ss_pred             ceEEEEEecCCCCchHHHHHccCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHHhc---CceeecccHhHeEe
Confidence            4578899998754322211 00              001114555799999999999999998   78889999999999


Q ss_pred             cCCCCCeEeeeeceEEeC
Q 045577          264 DAEINPNISDFGPARIFG  281 (392)
Q Consensus       264 ~~~~~~kl~DFGla~~~~  281 (392)
                      +.+.+++|+..|......
T Consensus       427 ~G~~RIriS~C~i~Dvl~  444 (655)
T KOG3741|consen  427 TGKMRIRISGCGIMDVLQ  444 (655)
T ss_pred             eCcceEEEecccceeeec
Confidence            999888988877766554

>KOG2268 consensus Serine/threonine protein kinase [Signal transduction mechanisms; General function prediction only]

Probab=85.88  E-value=0.57  Score=44.84  Aligned_cols=66  Identities=15%  Similarity=0.222  Sum_probs=42.9

Q ss_pred             CCeeEEecCccCCCcChhh-hhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEcCCCCCeEeeee
Q 045577          199 GEVFLMFEGIKLPDKSEFT-CEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEINPNISDFG  275 (392)
Q Consensus       199 ~~~~lv~e~~~~~~l~~~~-~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~~~~~~kl~DFG  275 (392)
                      ...++|||++++-.+.... .+.....|.. +..++..+|       .+   ++||+|..--||+++++..++++||-
T Consensus       181 ~RH~Vvmelv~g~Pl~~v~~v~d~~~ly~~-lm~~Iv~la-------~~---GlIHgDFNEFNimv~dd~~i~vIDFP  247 (465)
T KOG2268|consen  181 NRHCVVMELVDGYPLRQVRHVEDPPTLYDD-LMGLIVRLA-------NH---GLIHGDFNEFNIMVKDDDKIVVIDFP  247 (465)
T ss_pred             cceeeHHHhhcccceeeeeecCChHHHHHH-HHHHHHHHH-------Hc---CceecccchheeEEecCCCEEEeech
Confidence            5789999999875553311 1111111111 233333332       22   89999999999999999999999995

>TIGR00938 thrB_alt homoserine kinase, Neisseria type

Probab=85.52  E-value=0.78  Score=43.60  Aligned_cols=31  Identities=32%  Similarity=0.335  Sum_probs=26.9

Q ss_pred             CCceeecccccceeEEcCCCCCeEeeeeceE
Q 045577          248 RLEIIHRDHKTSNVLLDAEINPNISDFGPAR  278 (392)
Q Consensus       248 ~~~iiHrDlKp~NIll~~~~~~kl~DFGla~  278 (392)
                      ..+++|+|+.+.|++++.+....|.||+.+.
T Consensus       186 ~~~l~HgD~~~~Nvl~~~~~~~~vIDfd~~~  216 (307)
T TIGR00938       186 PRGVIHADLFPDNVLFDGDSVKGVIDFYFAC  216 (307)
T ss_pred             CCccCCCCCCcCcEEEECCceEEEeeccccc
Confidence            4589999999999999988767899998764

Homoserine kinase is required in the biosynthesis of threonine from aspartate.The member of this family from Pseudomonas aeruginosa was shown by direct assay and complementation to act specifically as a homoserine kinase.

>cd05156 ChoK_euk Choline Kinase (ChoK) in eukaryotes

Probab=85.09  E-value=1.1  Score=42.36  Aligned_cols=33  Identities=27%  Similarity=0.270  Sum_probs=27.9

Q ss_pred             CCCceeecccccceeEEcCC----CCCeEeeeeceEE
Q 045577          247 SRLEIIHRDHKTSNVLLDAE----INPNISDFGPARI  279 (392)
Q Consensus       247 ~~~~iiHrDlKp~NIll~~~----~~~kl~DFGla~~  279 (392)
                      ....++|+|+.+.||+++.+    +.++++||..+..
T Consensus       177 ~~~~lcH~Dl~~~Nil~~~~~~~~~~i~lIDwEya~~  213 (302)
T cd05156         177 SPVVFCHNDLQEGNILLLNPSSETKKLVLIDFEYASY  213 (302)
T ss_pred             CCceEEecCCCcCeEEecCCCCCCCcEEEEeeCCCCC
Confidence            44579999999999999874    7899999987753

The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC) and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. ChoK plays an important role in cell signaling pathways and the regulation of cell growth. Along with PCho, it is involved in malignant transformation through Ras oncogenes in various human cancer

>cd05155 APH_ChoK_like_1 Uncharacterized bacterial proteins with similarity to Aminoglycoside 3'-phosphotransferase (APH) and Choline kinase (ChoK) family members

Probab=84.65  E-value=0.63  Score=42.33  Aligned_cols=32  Identities=22%  Similarity=0.265  Sum_probs=26.1

Q ss_pred             CCceeecccccceeEEcCCCCCeEeeeeceEE
Q 045577          248 RLEIIHRDHKTSNVLLDAEINPNISDFGPARI  279 (392)
Q Consensus       248 ~~~iiHrDlKp~NIll~~~~~~kl~DFGla~~  279 (392)
                      ...++|+|+.+.||+++.+....|.||+.+..
T Consensus       163 ~~~l~HGD~~~~Nvlv~~~~i~giIDw~~a~~  194 (235)
T cd05155         163 PPVWFHGDLAPGNLLVQDGRLSAVIDFGCLGV  194 (235)
T ss_pred             CceEEeCCCCCCcEEEECCCEEEEEeCcccCc
Confidence            34699999999999998765567999997643

The APH/ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates, such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides, and macrolides leads to their inactivation and to bacterial antibiotic resista

>PF01636 APH: Phosphotransferase enzyme family This family is part of the larger protein kinase superfamily

Probab=83.98  E-value=0.59  Score=41.68  Aligned_cols=32  Identities=31%  Similarity=0.391  Sum_probs=21.5

Q ss_pred             CCceeecccccceeEEc-CCCCCeEeeeeceEE
Q 045577          248 RLEIIHRDHKTSNVLLD-AEINPNISDFGPARI  279 (392)
Q Consensus       248 ~~~iiHrDlKp~NIll~-~~~~~kl~DFGla~~  279 (392)
                      ...++|+|+.+.||+++ .++.+.|.||+.+..
T Consensus       165 ~~~~~HgD~~~~Nil~~~~~~~i~iID~e~a~~  197 (239)
T PF01636_consen  165 PPVLIHGDLHPGNILVDPSDGRIGIIDFEDAGW  197 (239)
T ss_dssp             CEEEE-SS-SGGGEEEESSTTEEEE--GTT-EE
T ss_pred             CcEEEEeccccccceeeeccceeEEEecccceE
Confidence            44799999999999999 555557999987754

; InterPro: IPR002575 This entry consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include:- aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation []. The proteins are found in a range of taxonomic groups.; PDB: 2PPQ_A 2Q83_B 3TDV_B 3TDW_A 3I0O_A 3I0Q_A 3I1A_B 3Q2M_A 3HAV_C 2PUI_B ....

>PRK05231 homoserine kinase; Provisional

Probab=83.17  E-value=0.69  Score=44.12  Aligned_cols=30  Identities=30%  Similarity=0.303  Sum_probs=25.5

Q ss_pred             CceeecccccceeEEcCCCCCeEeeeeceE
Q 045577          249 LEIIHRDHKTSNVLLDAEINPNISDFGPAR  278 (392)
Q Consensus       249 ~~iiHrDlKp~NIll~~~~~~kl~DFGla~  278 (392)
                      .+++|+|+.+.||+++.+...-|.||+.+.
T Consensus       187 ~~liHgD~~~~Nil~~~~~~~~iIDf~~~~  216 (319)
T PRK05231        187 RGVIHADLFRDNVLFEGDRLSGFIDFYFAC  216 (319)
T ss_pred             cccCCCCCCCCcEEEECCceEEEEeccccc
Confidence            379999999999999876555799998764

>TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172

Probab=82.69  E-value=1  Score=40.91  Aligned_cols=29  Identities=17%  Similarity=0.227  Sum_probs=25.6

Q ss_pred             CceeecccccceeEEcCCCCCeEeeeeceE
Q 045577          249 LEIIHRDHKTSNVLLDAEINPNISDFGPAR  278 (392)
Q Consensus       249 ~~iiHrDlKp~NIll~~~~~~kl~DFGla~  278 (392)
                      ..++|+|+.|.||++++++ +.|.||+.+.
T Consensus       153 ~~~~HgD~~~~Nii~~~~~-~~iIDwe~a~  181 (226)
T TIGR02172       153 STCLHGDFQIGNLITSGKG-TYWIDLGDFG  181 (226)
T ss_pred             CceEecCCCCCcEEEcCCC-cEEEechhcC
Confidence            3578999999999999887 9999998765

This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636.

>cd05157 ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes

Probab=82.08  E-value=0.96  Score=40.90  Aligned_cols=30  Identities=17%  Similarity=0.295  Sum_probs=26.1

Q ss_pred             CceeecccccceeEEcC-CCCCeEeeeeceE
Q 045577          249 LEIIHRDHKTSNVLLDA-EINPNISDFGPAR  278 (392)
Q Consensus       249 ~~iiHrDlKp~NIll~~-~~~~kl~DFGla~  278 (392)
                      ..++|+|+.+.||+++. +..+.+.||-.|.
T Consensus       170 ~~l~H~Dl~~~Nil~~~~~~~~~lIDwe~a~  200 (235)
T cd05157         170 IVFCHNDLLSGNIIYNEEKNSVKFIDYEYAG  200 (235)
T ss_pred             EEEEcCCCCcCcEEEeCCCCCEEEEEcccCC
Confidence            47999999999999997 5789999998664

ETNK is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major phospholipid, phosphatidylethanolamine (PtdEtn). Unlike ChoK, ETNK shows specific activity for its substrate, and displays negligible activity towards N-methylated derivatives of Etn. The Drosophila ETNK is implicated in development and neuronal function. Mammals contain two ETNK proteins, ETNK1 and ETNK2. ETNK1 selectively increases Etn uptake and phosphorylation, as well as PtdEtn synthesis. ETNK2 is found primarily in the liver and reproductive tissues. It plays a critical role in regulating placental hemostasis to support late embryo

>PF07387 Seadorna_VP7: Seadornavirus VP7; InterPro: IPR009973 This family consists of several Seadornavirus specific VP7 proteins of around 305 residues in length

Probab=81.91  E-value=1.5  Score=39.71  Aligned_cols=38  Identities=13%  Similarity=0.129  Sum_probs=31.8

Q ss_pred             HhhhhcCcCCCCceeecccccceeEEcCCCCCeEeeeec
Q 045577          238 RVILYLPEDSRLEIIHRDHKTSNVLLDAEINPNISDFGP  276 (392)
Q Consensus       238 ~gL~yLH~~~~~~iiHrDlKp~NIll~~~~~~kl~DFGl  276 (392)
                      .+|.-.|+. ....+|+|..|+||+-|+.|.+|+.|=+.
T Consensus       152 ~~L~~fH~~-~~~~lHGD~np~NiM~D~~G~lKlVDP~~  189 (308)
T PF07387_consen  152 KDLMDFHSE-NQHCLHGDCNPDNIMCDKFGYLKLVDPVC  189 (308)
T ss_pred             HHHHHhhcc-CCCeecCCCChhheeecCCCCEEecChhh
Confidence            667778863 34799999999999999999999998553

The function of this family is unknown.

>COG5072 ALK1 Serine/threonine kinase of the haspin family [Cell division and chromosome partitioning]

Probab=81.52  E-value=2.5  Score=41.17  Aligned_cols=49  Identities=22%  Similarity=0.373  Sum_probs=38.9

Q ss_pred             hhhHHHHHHHhhhhcCcCCCCceeecccccceeEEcCCCCCeEeeeeceEEe
Q 045577          229 VTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEINPNISDFGPARIF  280 (392)
Q Consensus       229 ~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~~~~~~kl~DFGla~~~  280 (392)
                      .+.|+.+.+.-+.-+..+  .+.-|||+.-.||+|+ .|.+.|+||-+++.-
T Consensus       323 ~lsff~s~~sil~~lekk--f~fehrnlt~~niLId-~GnvtLIDfklsRl~  371 (488)
T COG5072         323 ELSFFWSCISILDILEKK--FPFEHRNLTLDNILID-EGNVTLIDFKLSRLS  371 (488)
T ss_pred             HHHHHHHHHHHHhhhhhc--CCcccccccccceeee-cCceEEEEeeeeecc
Confidence            567777666555555443  3789999999999999 899999999999854

>cd05150 APH Aminoglycoside 3'-phosphotransferase (APH)

Probab=81.08  E-value=0.99  Score=41.15  Aligned_cols=31  Identities=23%  Similarity=0.326  Sum_probs=26.7

Q ss_pred             CCceeecccccceeEEcCCCCCeEeeeeceE
Q 045577          248 RLEIIHRDHKTSNVLLDAEINPNISDFGPAR  278 (392)
Q Consensus       248 ~~~iiHrDlKp~NIll~~~~~~kl~DFGla~  278 (392)
                      .+.++|+|+.|.||+++.+....|.||+.+.
T Consensus       162 ~~~l~HgD~~~~Nil~~~~~~~~iIDwe~a~  192 (244)
T cd05150         162 DLVVTHGDACLPNIIVDPGKFSGFIDLGRLG  192 (244)
T ss_pred             ceEEECCCCCCccEEEeCCcEEEEEEccccc
Confidence            3479999999999999987777899998764

The APH subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). APH catalyzes the transfer of the gamma-phosphoryl group from ATP to aminoglycoside antibiotics such as kanamycin, streptomycin, neomycin, and gentamicin, among others. The aminoglycoside antibiotics target the 30S ribosome and promote miscoding, leading to the production of defective proteins which insert into the bacterial membrane, resulting in membrane damage and the ultimate demise of the bacterium. Phosphorylation of the aminoglycoside antibiotics results in their inactivation, leading to bacterial antibiotic resistance. The APH gene is found on transposons and plasmids and is thought to have originated as a self-defense mechanism used by microorganisms that produce the antibio

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	392
3tl8_A	349	The Avrptob-Bak1 Complex Reveals Two Structurally S		1e-07
3uim_A	326	Structural Basis For The Impact Of Phosphorylation		4e-07
2nry_A	307	Crystal Structure Of Irak-4 Length = 307		2e-04
2rei_A	318	Kinase Domain Of Human Ephrin Type-a Receptor 7 (ep		2e-04
2o8y_A	298	Apo Irak4 Kinase Domain Length = 298		2e-04
2nru_A	307	Crystal Structure Of Irak-4 Length = 307		2e-04
2oib_A	301	Crystal Structure Of Irak4 Kinase Domain Apo Form L		2e-04
3oz6_A	388	Crystal Structure Of Mapk From Cryptosporidium Parv		3e-04
1v0b_A	288	Crystal Structure Of The T198a Mutant Of Pfpk5 Leng		4e-04
1v0o_A	288	Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulpho		5e-04
2y6m_A	291	Crystal Structure Of Epha4 Kinase Domain Length = 2		5e-04
2xyu_A	285	Crystal Structure Of Epha4 Kinase Domain In Complex		5e-04
2hel_A	306	Crystal Structure Of A Mutant Epha4 Kinase Domain (		6e-04
1ob3_A	288	Structure Of P. Falciparum Pfpk5 Length = 288		7e-04
2wzj_A	327	Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82		7e-04

>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector Length = 349

Iteration: 1
 Score = 54.3 bits (129), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 47/178 (26%), Positives = 70/178 (39%), Gaps = 42/178 (23%)
Query: 231 NILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEINPNISDFGPARIFGDQTEEVTGR 290
            I  G AR + YL +    +IIHRD K +N+LLD E    + DFG A++   +   V   
Sbjct: 143 RIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXA 202
Query: 291 VIGTQTLKTVPELLQAWKLWSEGDP-------MEIIDEQ--------------------- 322
           V GT      PE L   K   + D        +E+I  Q                     
Sbjct: 203 VRGT-IGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVK 261
Query: 323 -------------TKMKGPFSADELVKCIEVGLLCVQQRIEDWPTMSSVLTMLSNESI 367
                          ++G +  +E+ + I+V LLC Q    + P MS V+ ML  + +
Sbjct: 262 GLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGDGL 319

>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On Plant Receptor- Like Kinase Bak1 Activation Length = 326

Iteration: 1
 Score = 52.4 bits (124), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 46/178 (25%), Positives = 69/178 (38%), Gaps = 42/178 (23%)
Query: 231 NILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEINPNISDFGPARIFGDQTEEVTGR 290
            I  G AR + YL +    +IIHRD K +N+LLD E    + DFG A++   +   V   
Sbjct: 135 RIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXA 194
Query: 291 VIGTQTLKTVPELLQAWKLWSEGDP-------MEIIDEQ--------------------- 322
           V G       PE L   K   + D        +E+I  Q                     
Sbjct: 195 VRGX-IGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVK 253
Query: 323 -------------TKMKGPFSADELVKCIEVGLLCVQQRIEDWPTMSSVLTMLSNESI 367
                          ++G +  +E+ + I+V LLC Q    + P MS V+ ML  + +
Sbjct: 254 GLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGDGL 311

>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4 Length = 307

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 30/76 (39%), Positives = 39/76 (51%), Gaps = 5/76 (6%)
Query: 232 ILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEINPNISDFGPARIFGDQTEEV-TGR 290
           I  G A  I +L E+     IHRD K++N+LLD      ISDFG AR      + V   R
Sbjct: 138 IAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXSR 194
Query: 291 VIGTQTLKTVPELLQA 306
           ++GT T    PE L+ 
Sbjct: 195 IVGT-TAYMAPEALRG 209

>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7) Length = 318

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 35/121 (28%), Positives = 59/121 (48%), Gaps = 11/121 (9%)
Query: 229 VTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEINPNISDFGPARIFGDQTEEVT 288
           +  +L GIA  + YL +   +  +HRD    N+L+++ +   +SDFG +R+  D  E V 
Sbjct: 147 LVGMLRGIAAGMRYLAD---MGYVHRDLAARNILVNSNLVCKVSDFGLSRVIEDDPEAVY 203
Query: 289 GRVIGTQTLK-TVPELLQAWK------LWSEGDPM-EIIDEQTKMKGPFSADELVKCIEV 340
               G   ++ T PE +Q  K      +WS G  M E++    +     S  +++K IE 
Sbjct: 204 TTTGGKIPVRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEE 263
Query: 341 G 341
           G
Sbjct: 264 G 264

>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain Length = 298

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 30/76 (39%), Positives = 39/76 (51%), Gaps = 5/76 (6%)
Query: 232 ILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEINPNISDFGPARIFGDQTEEV-TGR 290
           I  G A  I +L E+     IHRD K++N+LLD      ISDFG AR      + V   R
Sbjct: 129 IAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVXXSR 185
Query: 291 VIGTQTLKTVPELLQA 306
           ++GT T    PE L+ 
Sbjct: 186 IVGT-TAYXAPEALRG 200

>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4 Length = 307

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 30/76 (39%), Positives = 39/76 (51%), Gaps = 5/76 (6%)
Query: 232 ILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEINPNISDFGPARIFGDQTEEV-TGR 290
           I  G A  I +L E+     IHRD K++N+LLD      ISDFG AR      + V   R
Sbjct: 138 IAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXXR 194
Query: 291 VIGTQTLKTVPELLQA 306
           ++GT T    PE L+ 
Sbjct: 195 IVGT-TAYMAPEALRG 209

>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form Length = 301

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 30/76 (39%), Positives = 39/76 (51%), Gaps = 5/76 (6%)
Query: 232 ILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEINPNISDFGPARIFGDQTEEV-TGR 290
           I  G A  I +L E+     IHRD K++N+LLD      ISDFG AR      + V   R
Sbjct: 132 IAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVMXXR 188
Query: 291 VIGTQTLKTVPELLQA 306
           ++GT T    PE L+ 
Sbjct: 189 IVGT-TAYMAPEALRG 203

>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum, Cgd2_1960 Length = 388

Iteration: 1
 Score = 42.7 bits (99), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 26/84 (30%), Positives = 45/84 (53%), Gaps = 6/84 (7%)
Query: 197 GDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDH 256
            D +V+L+F+ ++    +          +  YV   +Y + +VI YL       ++HRD 
Sbjct: 82  NDRDVYLVFDYMETDLHAVIRANILEPVHKQYV---VYQLIKVIKYLHSGG---LLHRDM 135
Query: 257 KTSNVLLDAEINPNISDFGPARIF 280
           K SN+LL+AE +  ++DFG +R F
Sbjct: 136 KPSNILLNAECHVKVADFGLSRSF 159

>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5 Length = 288

Iteration: 1
 Score = 42.4 bits (98), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 45/167 (26%), Positives = 73/167 (43%), Gaps = 24/167 (14%)
Query: 217 TCE--FECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEINPNISDF 274
            CE   E     S++  +L GIA        D R  ++HRD K  N+L++ E    I+DF
Sbjct: 92  VCEGGLESVTAKSFLLQLLNGIAYC-----HDRR--VLHRDLKPQNLLINREGELKIADF 144
Query: 275 GPARIFGDQTEEVTGRVIGTQTL-KTVPELLQAWK-------LWSEGDPM-EIIDEQTKM 325
           G AR FG    + T  V+   TL    P++L   K       +WS G    E+++     
Sbjct: 145 GLARAFGIPVRKYTHEVV---TLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGAPLF 201
Query: 326 KGPFSADELVKCIEVGLLCVQQRIEDWPTMSSVLTMLSNESIKVPQP 372
            G   AD+L++   +         ++WP ++ +     N ++  P P
Sbjct: 202 PGVSEADQLMRIFRI---LGTPNSKNWPNVTELPKYDPNFTVYEPLP 245

>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate Ligand Complex Length = 288

Iteration: 1
 Score = 42.4 bits (98), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 45/167 (26%), Positives = 73/167 (43%), Gaps = 24/167 (14%)
Query: 217 TCE--FECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEINPNISDF 274
            CE   E     S++  +L GIA        D R  ++HRD K  N+L++ E    I+DF
Sbjct: 92  VCEGGLESVTAKSFLLQLLNGIAYC-----HDRR--VLHRDLKPQNLLINREGELKIADF 144
Query: 275 GPARIFGDQTEEVTGRVIGTQTL-KTVPELLQAWK-------LWSEGDPM-EIIDEQTKM 325
           G AR FG    + T  V+   TL    P++L   K       +WS G    E+++     
Sbjct: 145 GLARAFGIPVRKYTHEVV---TLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLF 201
Query: 326 KGPFSADELVKCIEVGLLCVQQRIEDWPTMSSVLTMLSNESIKVPQP 372
            G   AD+L++   +         ++WP ++ +     N ++  P P
Sbjct: 202 PGVSEADQLMRIFRI---LGTPNSKNWPNVTELPKYDPNFTVYEPLP 245

>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain Length = 291

Iteration: 1
 Score = 42.0 bits (97), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 40/159 (25%), Positives = 66/159 (41%), Gaps = 28/159 (17%)
Query: 229 VTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEINPNISDFGPARIFGDQTEEVT 288
           +  +L GI   + YL   S +  +HRD    N+L+++ +   +SDFG +R+  D  E   
Sbjct: 118 LVGMLRGIGSGMKYL---SDMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAY 174
Query: 289 GRVIGTQTLK-TVPELLQAWK------LWSEGDPM-EIIDEQTKMKGPFSADELVKCIEV 340
               G   ++ T PE +   K      +WS G  M E++    +     S  +++K IE 
Sbjct: 175 TTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEE 234
Query: 341 G-----------------LLCVQQRIEDWPTMSSVLTML 362
           G                 L C Q+   D P    ++ ML
Sbjct: 235 GYRLPPPMDCPIALHQLMLDCWQKERSDRPKFGQIVNML 273

>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With Vuf 12058 Length = 285

Iteration: 1
 Score = 42.0 bits (97), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 40/159 (25%), Positives = 66/159 (41%), Gaps = 28/159 (17%)
Query: 229 VTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEINPNISDFGPARIFGDQTEEVT 288
           +  +L GI   + YL   S +  +HRD    N+L+++ +   +SDFG +R+  D  E   
Sbjct: 112 LVGMLRGIGSGMKYL---SDMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAY 168
Query: 289 GRVIGTQTLK-TVPELLQAWK------LWSEGDPM-EIIDEQTKMKGPFSADELVKCIEV 340
               G   ++ T PE +   K      +WS G  M E++    +     S  +++K IE 
Sbjct: 169 TTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEE 228
Query: 341 G-----------------LLCVQQRIEDWPTMSSVLTML 362
           G                 L C Q+   D P    ++ ML
Sbjct: 229 GYRLPPPMDCPIALHQLMLDCWQKERSDRPKFGQIVNML 267

>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a) Length = 306

Iteration: 1
 Score = 42.0 bits (97), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 40/159 (25%), Positives = 66/159 (41%), Gaps = 28/159 (17%)
Query: 229 VTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEINPNISDFGPARIFGDQTEEVT 288
           +  +L GI   + YL   S +  +HRD    N+L+++ +   +SDFG +R+  D  E   
Sbjct: 133 LVGMLRGIGSGMKYL---SDMSAVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAY 189
Query: 289 GRVIGTQTLK-TVPELLQAWK------LWSEGDPM-EIIDEQTKMKGPFSADELVKCIEV 340
               G   ++ T PE +   K      +WS G  M E++    +     S  +++K IE 
Sbjct: 190 TTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEE 249
Query: 341 G-----------------LLCVQQRIEDWPTMSSVLTML 362
           G                 L C Q+   D P    ++ ML
Sbjct: 250 GYRLPPPMDCPIALHQLMLDCWQKERSDRPKFGQIVNML 288

>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5 Length = 288

Iteration: 1
 Score = 42.0 bits (97), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 44/167 (26%), Positives = 73/167 (43%), Gaps = 24/167 (14%)
Query: 217 TCE--FECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEINPNISDF 274
            CE   E     S++  +L GIA        D R  ++HRD K  N+L++ E    I+DF
Sbjct: 92  VCEGGLESVTAKSFLLQLLNGIAYC-----HDRR--VLHRDLKPQNLLINREGELKIADF 144
Query: 275 GPARIFGDQTEEVTGRVIGTQTL-KTVPELLQAWK-------LWSEGDPM-EIIDEQTKM 325
           G AR FG    + T  ++   TL    P++L   K       +WS G    E+++     
Sbjct: 145 GLARAFGIPVRKYTHEIV---TLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLF 201
Query: 326 KGPFSADELVKCIEVGLLCVQQRIEDWPTMSSVLTMLSNESIKVPQP 372
            G   AD+L++   +         ++WP ++ +     N ++  P P
Sbjct: 202 PGVSEADQLMRIFRI---LGTPNSKNWPNVTELPKYDPNFTVYEPLP 245

>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r, T208e Double Mutant Length = 327

Iteration: 1
 Score = 42.0 bits (97), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 24/60 (40%), Positives = 33/60 (55%), Gaps = 7/60 (11%)
Query: 251 IIHRDHKTSNVLLDAEINPNISDFGPAR--IFGDQTEEVTGRVIGTQTLKTVPELLQAWK 308
           I+HRD K  N+LLDA++N  I+DFG +    FG++ +E  G           PEL Q  K
Sbjct: 134 IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDEFCG-----SPPYAAPELFQGKK 188

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	392
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	3e-31
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	2e-28
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	2e-21
3soc_A	322	Activin receptor type-2A; structural genomics cons	1e-11
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	3e-09
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	4e-08
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	5e-08
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	3e-07
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	4e-07
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	5e-07
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	7e-07
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	9e-07
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	1e-06
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	1e-06
3q4u_A	301	Activin receptor type-1; structural genomics conso	1e-06
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	1e-06
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	2e-06
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	2e-06
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	3e-06
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	3e-06
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	3e-06
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	4e-06
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	4e-06
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	5e-06
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	6e-06
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	7e-06
3ork_A	311	Serine/threonine protein kinase; structural genomi	7e-06
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	1e-05
3o0g_A	292	Cell division protein kinase 5; kinase activator c	1e-05
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	1e-05
3niz_A	311	Rhodanese family protein; structural genomics, str	1e-05
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	1e-05
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	1e-05
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	2e-05
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	2e-05
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	2e-05
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	2e-05
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	2e-05
4apc_A	350	Serine/threonine-protein kinase NEK1; transferase;	2e-05
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	3e-05
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	3e-05
2a19_B	284	Interferon-induced, double-stranded RNA-activated	3e-05
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	3e-05
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	3e-05
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	4e-05
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	4e-05
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	4e-05
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	4e-05
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	5e-05
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	5e-05
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	5e-05
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	5e-05
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	5e-05
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	5e-05
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	6e-05
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	6e-05
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	7e-05
3rp9_A	458	Mitogen-activated protein kinase; structural genom	7e-05
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	7e-05
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	8e-05
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	9e-05
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	1e-04
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	1e-04
1xd5_A	112	Gastrodianin-1, antifungal protein GAFP-1; monocot	1e-04
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	1e-04
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	1e-04
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	1e-04
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	1e-04
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	2e-04
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	2e-04
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	2e-04
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	2e-04
1kj1_A	109	Lectin I, lecgna 1; BULB lectin, mannose, plant pr	2e-04
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	2e-04
3fme_A	290	Dual specificity mitogen-activated protein kinase;	3e-04
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	3e-04
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	3e-04
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	3e-04
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	3e-04
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	3e-04
3an0_A	340	Dual specificity mitogen-activated protein kinase;	4e-04
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	4e-04
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	4e-04
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	4e-04
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	4e-04
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	5e-04
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	5e-04
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	6e-04
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	6e-04
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	8e-04
3aln_A	327	Dual specificity mitogen-activated protein kinase;	9e-04
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	9e-04

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3tl8_A* Length = 326

 Score =  120 bits (303), Expect = 3e-31
 Identities = 47/179 (26%), Positives = 72/179 (40%), Gaps = 44/179 (24%)

Query: 231 NILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEINPNISDFGPARIFGDQTEEVTGR 290
            I  G AR + YL +    +IIHRD K +N+LLD E    + DFG A++   +   VT  
Sbjct: 135 RIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTA 194

Query: 291 VIGTQ-------------TLKT--------VPELL---------------------QAWK 308
           V GT              + KT        + EL+                         
Sbjct: 195 VRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKG 254

Query: 309 LWSEGDPMEIIDEQTKMKGPFSADELVKCIEVGLLCVQQRIEDWPTMSSVLTMLSNESI 367
           L  E     ++D    ++G +  +E+ + I+V LLC Q    + P MS V+ ML  + +
Sbjct: 255 LLKEKKLEALVDV--DLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGDGL 311

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A* Length = 307

 Score =  112 bits (282), Expect = 2e-28
 Identities = 41/175 (23%), Positives = 60/175 (34%), Gaps = 45/175 (25%)

Query: 231 NILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEINPNISDFGPARIFG-DQTEEVTG 289
            I  G A  I +L E+     IHRD K++N+LLD      ISDFG AR         +T 
Sbjct: 137 KIAQGAANGINFLHENH---HIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMTS 193

Query: 290 RVIGTQ------------TLK----------------------TVPE--LLQ-AWKLWSE 312
           R++GT             T K                            LL    ++  E
Sbjct: 194 RIVGTTAYMAPEALRGEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIKEEIEDE 253

Query: 313 GDPME-IIDEQTKMKGPFSADELVKCIEVGLLCVQQRIEDWPTMSSVLTMLSNES 366
              +E  ID   KM     +  +     V   C+ ++    P +  V  +L   +
Sbjct: 254 EKTIEDYID--KKMND-ADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEMT 305

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A* Length = 321

 Score = 93.0 bits (232), Expect = 2e-21
 Identities = 45/173 (26%), Positives = 67/173 (38%), Gaps = 48/173 (27%)

Query: 232 ILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEINPNISDFGPARIF--GDQTEEVTG 289
           I  G AR + YL   +   IIHRD K+ N+LLD    P I+DFG ++     DQT  ++ 
Sbjct: 144 ICIGAARGLHYLHTRA---IIHRDVKSINILLDENFVPKITDFGISKKGTELDQT-HLST 199

Query: 290 RVIGTQ-------------TLK----------------------TVPE----LLQ-AWKL 309
            V GT              T K                      ++P     L + A + 
Sbjct: 200 VVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVES 259

Query: 310 WSEGDPMEIIDEQTKMKGPFSADELVKCIEVGLLCVQQRIEDWPTMSSVLTML 362
            + G   +I+D    +      + L K  +  + C+    ED P+M  VL  L
Sbjct: 260 HNNGQLEQIVDP--NLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKL 310

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 2qlu_A* Length = 322

 Score = 64.4 bits (157), Expect = 1e-11
 Identities = 25/72 (34%), Positives = 35/72 (48%), Gaps = 8/72 (11%)

Query: 231 NILYGIARVILYLPED-------SRLEIIHRDHKTSNVLLDAEINPNISDFGPARIF-GD 282
           +I   +AR + YL ED        +  I HRD K+ NVLL   +   I+DFG A  F   
Sbjct: 125 HIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAG 184

Query: 283 QTEEVTGRVIGT 294
           ++   T   +GT
Sbjct: 185 KSAGDTHGQVGT 196

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens} Length = 336

 Score = 57.2 bits (138), Expect = 3e-09
 Identities = 19/87 (21%), Positives = 32/87 (36%), Gaps = 12/87 (13%)

Query: 231 NILYGIARVILYL------PEDSRLEIIHRDHKTSNVLLDAEINPNISDFGPARIFGDQT 284
            + + + R + YL       +  +  I HRD  + NVL+  +    ISDFG +       
Sbjct: 115 RLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNR 174

Query: 285 EEVTGRVIGTQTLKT------VPELLQ 305
               G        +        PE+L+
Sbjct: 175 LVRPGEEDNAAISEVGTIRYMAPEVLE 201

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* Length = 309

 Score = 53.1 bits (128), Expect = 5e-08
 Identities = 17/66 (25%), Positives = 32/66 (48%), Gaps = 2/66 (3%)

Query: 229 VTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEINPNISDFGPARIFGDQTEEVT 288
             ++ Y +A+ + YL  +    I+HR+ K+ N+L+D +    + DFG +R+         
Sbjct: 139 RLSMAYDVAKGMNYL-HNRNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTFLSSK 197

Query: 289 GRVIGT 294
               GT
Sbjct: 198 S-AAGT 202

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} Length = 413

 Score = 50.8 bits (121), Expect = 3e-07
 Identities = 9/54 (16%), Positives = 17/54 (31%), Gaps = 6/54 (11%)

Query: 251 IIHRDHKTSNVLLDAEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELL 304
           ++H   +  +++LD      ++ F      G       GR          PE  
Sbjct: 232 LVHTYLRPVDIVLDQRGGVFLTGFEHLVRDGASAVSPIGRGFAP------PETT 279

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} Length = 307

 Score = 50.0 bits (120), Expect = 4e-07
 Identities = 19/67 (28%), Positives = 27/67 (40%), Gaps = 5/67 (7%)

Query: 229 VTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEIN-PNISDFGPARIFGDQTEEV 287
             +     ++ + YL       +IHRD K  N+LL A      I DFG A    D    +
Sbjct: 104 AMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTAC---DIQTHM 160

Query: 288 TGRVIGT 294
           T    G+
Sbjct: 161 TNNK-GS 166

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp} Length = 294

 Score = 49.9 bits (120), Expect = 5e-07
 Identities = 17/44 (38%), Positives = 25/44 (56%)

Query: 251 IIHRDHKTSNVLLDAEINPNISDFGPARIFGDQTEEVTGRVIGT 294
           I+HRD K  N+L+D+     I DFG A+   + +   T  V+GT
Sbjct: 132 IVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQTNHVLGT 175

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* Length = 287

 Score = 49.6 bits (119), Expect = 7e-07
 Identities = 14/66 (21%), Positives = 29/66 (43%), Gaps = 6/66 (9%)

Query: 229 VTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEINPN-----ISDFGPARIFGDQ 283
              ++  IA  I Y+ ++    I+HRD ++ N+ L +          ++DFG ++     
Sbjct: 124 KLRLMLDIALGIEYM-QNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQSVHS 182

Query: 284 TEEVTG 289
              + G
Sbjct: 183 VSGLLG 188

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} Length = 310

 Score = 48.5 bits (116), Expect = 1e-06
 Identities = 19/60 (31%), Positives = 29/60 (48%), Gaps = 3/60 (5%)

Query: 231 NILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEINPNISDFGPARIFGDQTEEVTGR 290
           +    IA  + YL     + IIHRD  + N L+    N  ++DFG AR+  D+  +  G 
Sbjct: 112 SFAKDIASGMAYL---HSMNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGL 168

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} Length = 337

 Score = 48.6 bits (116), Expect = 1e-06
 Identities = 21/73 (28%), Positives = 29/73 (39%), Gaps = 10/73 (13%)

Query: 231 NILYGIARVILYL-----PEDSRLEIIHRDHKTSNVLLDAEINPNISDFGPARIFGDQTE 285
            + Y     + +L         +  I HRD K+ N+L+       I+D G A  F   T 
Sbjct: 138 KLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTN 197

Query: 286 EV----TGRVIGT 294
           EV      RV GT
Sbjct: 198 EVDIPPNTRV-GT 209

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A* Length = 301

 Score = 48.5 bits (116), Expect = 1e-06
 Identities = 20/73 (27%), Positives = 31/73 (42%), Gaps = 10/73 (13%)

Query: 231 NILYGIARVILYL-----PEDSRLEIIHRDHKTSNVLLDAEINPNISDFGPARIFGDQTE 285
            I+  IA  + +L         +  I HRD K+ N+L+       I+D G A +    T 
Sbjct: 109 RIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTN 168

Query: 286 EV----TGRVIGT 294
           ++      RV GT
Sbjct: 169 QLDVGNNPRV-GT 180

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens} Length = 317

 Score = 48.5 bits (116), Expect = 1e-06
 Identities = 33/152 (21%), Positives = 45/152 (29%), Gaps = 30/152 (19%)

Query: 231 NILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEINPNISDFGPARIFGDQTEEVTGR 290
            +L GI R +  +         HRD K +N+LL  E  P + D G         E     
Sbjct: 138 WLLLGICRGLEAI---HAKGYAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQA 194

Query: 291 VIGTQTLKTV-------PELLQAWKLWSEGDPMEIIDEQT----------KM---KGPFS 330
           +                PEL              +IDE+T           M   +GP+ 
Sbjct: 195 LTLQDWAAQRCTISYRAPELFSVQ-------SHCVIDERTDVWSLGCVLYAMMFGEGPYD 247

Query: 331 ADELVKCIEVGLLCVQQRIEDWPTMSSVLTML 362
                       +  Q  I   P  SS L  L
Sbjct: 248 MVFQKGDSVALAVQNQLSIPQSPRHSSALWQL 279

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis} Length = 309

 Score = 48.4 bits (116), Expect = 2e-06
 Identities = 15/44 (34%), Positives = 21/44 (47%)

Query: 251 IIHRDHKTSNVLLDAEINPNISDFGPARIFGDQTEEVTGRVIGT 294
             HRD K  N+L+ A+    + DFG A    D+     G  +GT
Sbjct: 155 ATHRDVKPENILVSADDFAYLVDFGIASATTDEKLTQLGNTVGT 198

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A* Length = 329

 Score = 48.0 bits (115), Expect = 2e-06
 Identities = 21/63 (33%), Positives = 27/63 (42%), Gaps = 15/63 (23%)

Query: 251 IIHRDHKTSNVLLDAEINPN-----ISDFGPARIFGDQTEEVTGRVIGTQTLKTV----P 301
            +HRD K  N+LL            I DFG AR FG    + T  +I      T+    P
Sbjct: 153 CLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIPIRQFTHEII------TLWYRPP 206

Query: 302 ELL 304
           E+L
Sbjct: 207 EIL 209

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} Length = 271

 Score = 47.3 bits (113), Expect = 3e-06
 Identities = 23/72 (31%), Positives = 39/72 (54%), Gaps = 11/72 (15%)

Query: 231 NILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEINPN--------ISDFGPARIFGD 282
           N    IAR + YL +++ + IIHRD K+SN+L+  ++           I+DFG AR +  
Sbjct: 109 NWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREW-H 167

Query: 283 QTEEVTGRVIGT 294
           +T +++    G 
Sbjct: 168 RTTKMSA--AGA 177

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} PDB: 3c4c_A* 3c4d_A* 3idp_A* 3ii5_A* 3d4q_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 2fb8_A* 4dbn_A* 1uwj_A* 1uwh_A* 3q96_A* Length = 289

 Score = 47.7 bits (114), Expect = 3e-06
 Identities = 20/78 (25%), Positives = 34/78 (43%), Gaps = 5/78 (6%)

Query: 229 VTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEINPNISDFGPARIFGDQTEEVT 288
           + +I    AR + YL       IIHRD K++N+ L  +    I DFG A     +     
Sbjct: 122 LIDIARQTARGMDYL---HAKSIIHRDLKSNNIFLHEDNTVKIGDFGLATE-KSRWSGSH 177

Query: 289 GRVIGTQTLK-TVPELLQ 305
                + ++    PE+++
Sbjct: 178 QFEQLSGSILWMAPEVIR 195

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} PDB: 3kmw_A* 3rep_A* Length = 271

 Score = 47.2 bits (113), Expect = 3e-06
 Identities = 9/55 (16%), Positives = 18/55 (32%), Gaps = 1/55 (1%)

Query: 231 NILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEINPNISDFGPARIFGDQTE 285
                +AR + +L       I      + +V++D ++   IS       F     
Sbjct: 115 KFALDMARGMAFL-HTLEPLIPRHALNSRSVMIDEDMTARISMADVKFSFQSPGR 168

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens} Length = 405

 Score = 47.5 bits (113), Expect = 4e-06
 Identities = 31/135 (22%), Positives = 51/135 (37%), Gaps = 37/135 (27%)

Query: 251 IIHRDHKTSNVLLDAEINPN----ISDFGPARIFGDQTEEVT---GRVIGTQTLKTV--- 300
           ++HRD K +N+L+  E        I+D G AR+F    + +      V+      T    
Sbjct: 149 VLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVV------TFWYR 202

Query: 301 -PELL-------QAWKLWSEGDPM-EII---------DEQTKMKGPFSADELVKCIEVGL 342
            PELL       +A  +W+ G    E++          E  K   P+  D+L +   V  
Sbjct: 203 APELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFNV-- 260

Query: 343 LCVQQRIEDWPTMSS 357
                  +DW  +  
Sbjct: 261 -MGFPADKDWEDIKK 274

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A* Length = 342

 Score = 47.1 bits (112), Expect = 4e-06
 Identities = 18/73 (24%), Positives = 28/73 (38%), Gaps = 10/73 (13%)

Query: 231 NILYGIARVILYL-----PEDSRLEIIHRDHKTSNVLLDAEINPNISDFGPARIFGDQTE 285
            +    A  + +L         +  I HRD K+ N+L+       I+D G A      T+
Sbjct: 143 KLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATD 202

Query: 286 EV----TGRVIGT 294
            +      RV GT
Sbjct: 203 TIDIAPNHRV-GT 214

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A Length = 303

 Score = 46.9 bits (112), Expect = 5e-06
 Identities = 19/82 (23%), Positives = 28/82 (34%), Gaps = 19/82 (23%)

Query: 251 IIHRDHKTSNVLLDAEINPNISDFGPARIFGDQTEEVTGRVIGTQT----LKTV------ 300
           IIHRD K  N+ +D   N  I DFG A+      + +             L +       
Sbjct: 137 IIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMY 196

Query: 301 --PELLQAWK-------LWSEG 313
              E+L           ++S G
Sbjct: 197 VATEVLDGTGHYNEKIDMYSLG 218

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X* Length = 348

 Score = 46.6 bits (111), Expect = 6e-06
 Identities = 16/86 (18%), Positives = 29/86 (33%), Gaps = 11/86 (12%)

Query: 199 GEVF--LMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDH 256
             +     +  +   + + F                +  +     Y+   +   I HRD 
Sbjct: 128 DSILKFDEYFFVLDKNYTCFIPIQVIKCI-------IKSVLNSFSYI--HNEKNICHRDV 178

Query: 257 KTSNVLLDAEINPNISDFGPARIFGD 282
           K SN+L+D      +SDFG +    D
Sbjct: 179 KPSNILMDKNGRVKLSDFGESEYMVD 204

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* Length = 279

 Score = 46.5 bits (111), Expect = 7e-06
 Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 1/44 (2%)

Query: 251 IIHRDHKTSNVLLDAEINPNISDFGPARIFGDQTEEVTGRVIGT 294
           ++HRD K +NV LD + N  + DFG ARI  +         +GT
Sbjct: 137 VLHRDLKPANVFLDGKQNVKLGDFGLARIL-NHDTSFAKTFVGT 179

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A* Length = 311

 Score = 46.5 bits (111), Expect = 7e-06
 Identities = 20/46 (43%), Positives = 25/46 (54%), Gaps = 2/46 (4%)

Query: 251 IIHRDHKTSNVLLDAEINPNISDFGPARIFGDQTEEVT--GRVIGT 294
           IIHRD K +N+++ A     + DFG AR   D    VT    VIGT
Sbjct: 137 IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGT 182

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A* Length = 317

 Score = 46.0 bits (110), Expect = 1e-05
 Identities = 18/58 (31%), Positives = 28/58 (48%), Gaps = 10/58 (17%)

Query: 251 IIHRDHKTSNVLLDAEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTV----PELL 304
           I+HRD K  N+L++      + DFG AR FG      +  V+      T+    P++L
Sbjct: 129 ILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTFSSEVV------TLWYRAPDVL 180

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A Length = 292

 Score = 46.0 bits (110), Expect = 1e-05
 Identities = 16/58 (27%), Positives = 29/58 (50%), Gaps = 10/58 (17%)

Query: 251 IIHRDHKTSNVLLDAEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTV----PELL 304
           ++HRD K  N+L++      +++FG AR FG      +  V+      T+    P++L
Sbjct: 122 VLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCYSAEVV------TLWYRPPDVL 173

>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ... Length = 299

 Score = 45.6 bits (109), Expect = 1e-05
 Identities = 20/58 (34%), Positives = 30/58 (51%), Gaps = 10/58 (17%)

Query: 251 IIHRDHKTSNVLLDAEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTV----PELL 304
           ++HRD K  N+L++ E    ++DFG AR FG      T  V+      T+    PE+L
Sbjct: 124 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV------TLWYRAPEIL 175

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} PDB: 2qkr_A* Length = 311

 Score = 45.6 bits (109), Expect = 1e-05
 Identities = 19/58 (32%), Positives = 31/58 (53%), Gaps = 10/58 (17%)

Query: 251 IIHRDHKTSNVLLDAEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTV----PELL 304
           I+HRD K  N+L++++    ++DFG AR FG      T  V+      T+    P++L
Sbjct: 140 ILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVV------TLWYRAPDVL 191

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens} Length = 305

 Score = 45.7 bits (109), Expect = 1e-05
 Identities = 18/79 (22%), Positives = 24/79 (30%), Gaps = 24/79 (30%)

Query: 251 IIHRDHKTSNVLLDAEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTV--------PE 302
           I+H+D K  N+LL       IS  G A        +         T +T         PE
Sbjct: 130 IVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAAD--------DTCRTSQGSPAFQPPE 181

Query: 303 LLQAWKL--------WSEG 313
           +              WS G
Sbjct: 182 IANGLDTFSGFKVDIWSAG 200

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* Length = 351

 Score = 45.7 bits (109), Expect = 1e-05
 Identities = 22/62 (35%), Positives = 30/62 (48%), Gaps = 14/62 (22%)

Query: 251 IIHRDHKTSNVLLDAEINPNISDFGPARIFGDQTEEV----TGRVIGTQTLKTV----PE 302
           I+HRD K +NVL+  +    ++DFG AR F           T RV+      T+    PE
Sbjct: 145 ILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYTNRVV------TLWYRPPE 198

Query: 303 LL 304
           LL
Sbjct: 199 LL 200

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A Length = 288

 Score = 45.2 bits (108), Expect = 2e-05
 Identities = 19/58 (32%), Positives = 31/58 (53%), Gaps = 10/58 (17%)

Query: 251 IIHRDHKTSNVLLDAEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTV----PELL 304
           ++HRD K  N+L++ E    I+DFG AR FG    + T  ++      T+    P++L
Sbjct: 121 VLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEIV------TLWYRAPDVL 172

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens} Length = 324

 Score = 45.3 bits (108), Expect = 2e-05
 Identities = 16/58 (27%), Positives = 28/58 (48%), Gaps = 10/58 (17%)

Query: 251 IIHRDHKTSNVLLDAEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTV----PELL 304
           ++HRD K  N+L++      ++DFG AR     T+     V+      T+    P++L
Sbjct: 121 VLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTYDNEVV------TLWYRPPDIL 172

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7 Length = 346

 Score = 45.3 bits (108), Expect = 2e-05
 Identities = 22/58 (37%), Positives = 30/58 (51%), Gaps = 10/58 (17%)

Query: 251 IIHRDHKTSNVLLDAEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTV----PELL 304
           I+HRD K +N+LLD      ++DFG A+ FG      T +V+      T     PELL
Sbjct: 133 ILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYTHQVV------TRWYRAPELL 184

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens} Length = 311

 Score = 45.2 bits (108), Expect = 2e-05
 Identities = 18/58 (31%), Positives = 24/58 (41%), Gaps = 10/58 (17%)

Query: 251 IIHRDHKTSNVLLDAEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTV----PELL 304
            IHRD K  N+L+       + DFG AR+    ++     V       T     PELL
Sbjct: 123 CIHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYDDEVA------TRWYRSPELL 174

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} Length = 331

 Score = 45.3 bits (108), Expect = 2e-05
 Identities = 20/58 (34%), Positives = 23/58 (39%), Gaps = 10/58 (17%)

Query: 251 IIHRDHKTSNVLLDAEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTV----PELL 304
           IIHRD K  N+L+       + DFG AR      E     V       T     PELL
Sbjct: 145 IIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYDDEVA------TRWYRAPELL 196

>4apc_A Serine/threonine-protein kinase NEK1; transferase; 2.10A {Homo sapiens} Length = 350

 Score = 45.1 bits (107), Expect = 2e-05
 Identities = 17/44 (38%), Positives = 25/44 (56%), Gaps = 1/44 (2%)

Query: 251 IIHRDHKTSNVLLDAEINPNISDFGPARIFGDQTEEVTGRVIGT 294
           I+HRD K+ N+ L  +    + DFG AR+  + T E+    IGT
Sbjct: 146 ILHRDIKSQNIFLTKDGTVQLGDFGIARVL-NSTVELARACIGT 188

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ... Length = 367

 Score = 45.0 bits (107), Expect = 3e-05
 Identities = 29/90 (32%), Positives = 42/90 (46%), Gaps = 17/90 (18%)

Query: 232 ILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEINPNISDFGPARIFGDQ-TEEVTGR 290
           ++Y I R + Y+   S  +IIHRD K SN+ ++ +    I DFG AR   D+ T  V  R
Sbjct: 137 LIYQILRGLKYI--HSA-DIIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYVATR 193

Query: 291 VIGTQTLKTVPELLQAWK-------LWSEG 313
                     PE++  W        +WS G
Sbjct: 194 ------WYRAPEIMLNWMHYNQTVDIWSVG 217

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A* Length = 371

 Score = 45.0 bits (106), Expect = 3e-05
 Identities = 8/92 (8%), Positives = 23/92 (25%), Gaps = 9/92 (9%)

Query: 198 DGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHK 257
             ++ L+F  +                       +   + R+   L       ++H    
Sbjct: 171 SVDLELLFSTLDFVYVFRGDEGILALHI------LTAQLIRLAANL---QSKGLVHGHFT 221

Query: 258 TSNVLLDAEINPNISDFGPARIFGDQTEEVTG 289
             N+ +  +    + D       G +    + 
Sbjct: 222 PDNLFIMPDGRLMLGDVSALWKVGTRGPASSV 253

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* Length = 284

 Score = 44.2 bits (105), Expect = 3e-05
 Identities = 13/44 (29%), Positives = 18/44 (40%), Gaps = 2/44 (4%)

Query: 251 IIHRDHKTSNVLLDAEINPNISDFGPARIFGDQTEEVTGRVIGT 294
           +I+RD K SN+ L       I DFG      +  +       GT
Sbjct: 143 LINRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGKRTR--SKGT 184

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens} Length = 337

 Score = 44.4 bits (105), Expect = 3e-05
 Identities = 26/97 (26%), Positives = 39/97 (40%), Gaps = 18/97 (18%)

Query: 193 EADCGDGEVFLMFE---G------IKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYL 243
           E+D G  E  L+ E   G       K+  +   +C+         V  I Y   R + ++
Sbjct: 101 ESDTGQAEFLLLTELCKGQLVEFLKKMESRGPLSCDT--------VLKIFYQTCRAVQHM 152

Query: 244 PEDSRLEIIHRDHKTSNVLLDAEINPNISDFGPARIF 280
               +  IIHRD K  N+LL  +    + DFG A   
Sbjct: 153 -HRQKPPIIHRDLKVENLLLSNQGTIKLCDFGSATTI 188

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ... Length = 371

 Score = 44.7 bits (106), Expect = 3e-05
 Identities = 27/88 (30%), Positives = 43/88 (48%), Gaps = 12/88 (13%)

Query: 232 ILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEINPNISDFGPARIFGDQTEEVTGRV 291
           +LY +   I +L   S   IIHRD K SN+++ ++    I DFG AR     +  +T  V
Sbjct: 132 LLYQMLCGIKHL--HSA-GIIHRDLKPSNIVVKSDCTLKILDFGLARTA-GTSFMMTPYV 187

Query: 292 IGTQTLKTVPELLQAWK------LWSEG 313
           + T+  +  PE++          +WS G
Sbjct: 188 V-TRYYR-APEVILGMGYKENVDIWSVG 213

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens} Length = 308

 Score = 44.1 bits (105), Expect = 4e-05
 Identities = 16/40 (40%), Positives = 23/40 (57%), Gaps = 3/40 (7%)

Query: 251 IIHRDHKTSNVLLDAEINPNISDFGPARIFGDQ---TEEV 287
           I+HRD K  N+L+ +     ++DFG ARI+  Q   T  V
Sbjct: 141 IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALTPVV 180

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A* Length = 464

 Score = 44.5 bits (105), Expect = 4e-05
 Identities = 26/88 (29%), Positives = 42/88 (47%), Gaps = 12/88 (13%)

Query: 232 ILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEINPNISDFGPARIFGDQTEEVTGRV 291
           +LY +   I +L       IIHRD K SN+++ ++    I DFG AR     +  +T  V
Sbjct: 169 LLYQMLCGIKHL---HSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA-GTSFMMTPYV 224

Query: 292 IGTQTLKTVPELLQAWK------LWSEG 313
           + T+  +  PE++          +WS G
Sbjct: 225 V-TRYYR-APEVILGMGYKENVDIWSVG 250

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B Length = 326

 Score = 44.1 bits (105), Expect = 4e-05
 Identities = 15/40 (37%), Positives = 23/40 (57%), Gaps = 3/40 (7%)

Query: 251 IIHRDHKTSNVLLDAEINPNISDFGPARIFGDQ---TEEV 287
           ++HRD K  N+L+ +     ++DFG ARI+  Q   T  V
Sbjct: 141 VVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVV 180

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens} Length = 298

 Score = 43.8 bits (104), Expect = 4e-05
 Identities = 20/80 (25%), Positives = 29/80 (36%), Gaps = 27/80 (33%)

Query: 251 IIHRDHKTSNVLLDAEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTV--------PE 302
           IIHRD K SN+L+  + +  I+DFG +  F                L           PE
Sbjct: 158 IIHRDIKPSNLLVGEDGHIKIADFGVSNEFKG----------SDALLSNTVGTPAFMAPE 207

Query: 303 LLQAWK---------LWSEG 313
            L   +         +W+ G
Sbjct: 208 SLSETRKIFSGKALDVWAMG 227

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3mb7_A* 3mb6_A* 3owj_A* 3owk_A* ... Length = 330

 Score = 43.8 bits (104), Expect = 5e-05
 Identities = 23/75 (30%), Positives = 33/75 (44%), Gaps = 19/75 (25%)

Query: 251 IIHRDHKTSNVLLDAEI-NPNISDFGPARIFGDQTEEVTGRVIGTQTLKTV----PELLQ 305
           I+HRD K  NV++D E     + D+G A  F    +E   RV       +     PELL 
Sbjct: 151 IMHRDVKPHNVMIDHEHRKLRLIDWGLAE-FYHPGQEYNVRVA------SRYFKGPELLV 203

Query: 306 AWK-------LWSEG 313
            ++       +WS G
Sbjct: 204 DYQMYDYSLDMWSLG 218

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7 Length = 367

 Score = 43.9 bits (104), Expect = 5e-05
 Identities = 22/75 (29%), Positives = 30/75 (40%), Gaps = 22/75 (29%)

Query: 251 IIHRDHKTSNVLLDAEINPNISDFGPARIFGDQ-TEEVTGRVIGTQTLKT----VPELLQ 305
           IIHRD K  N+ ++ +    I DFG AR    + T  V           T     PE++ 
Sbjct: 149 IIHRDLKPGNLAVNEDCELKILDFGLARQADSEMTGYVV----------TRWYRAPEVIL 198

Query: 306 AWK-------LWSEG 313
            W        +WS G
Sbjct: 199 NWMRYTQTVDIWSVG 213

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A* Length = 676

 Score = 44.3 bits (104), Expect = 5e-05
 Identities = 27/135 (20%), Positives = 39/135 (28%), Gaps = 41/135 (30%)

Query: 196 CGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRD 255
           C  G+   + + +   +      E             L  I+  + YL       IIHRD
Sbjct: 100 CEGGD---LRKYLNQFENCCGLKEGPIRTL-------LSDISSALRYL---HENRIIHRD 146

Query: 256 HKTSNVLLDAEINPN---ISDFGPARIFGDQTEEVTGRVIGTQTLKTV--------PELL 304
            K  N++L          I D G A+                +             PELL
Sbjct: 147 LKPENIVLQPGPQRLIHKIIDLGYAKELDQG-----------ELCTEFVGTLQYLAPELL 195

Query: 305 QAWK------LWSEG 313
           +  K       WS G
Sbjct: 196 EQKKYTVTVDYWSFG 210

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 44.5 bits (104), Expect = 5e-05
 Identities = 69/396 (17%), Positives = 111/396 (28%), Gaps = 131/396 (33%)

Query: 25  SDETEVRDILLAPSTLWGGNSLI------PGNSSQSF----LVISYKNL----------- 63
           S E E+  I+++   + G   L            Q F    L I+YK L           
Sbjct: 47  SKE-EIDHIIMSKDAVSGTLRLFWTLLSKQEEMVQKFVEEVLRINYKFLMSPIKTEQRQP 105

Query: 64  -PPLVIWVANRNGSINSNLSQDNDLGIIWNVILPRATG-----------SPALQLLVAG- 110
                +++  R+      L  DN +   +NV   R               PA  +L+ G 
Sbjct: 106 SMMTRMYIEQRD-----RLYNDNQVFAKYNV--SRLQPYLKLRQALLELRPAKNVLIDGV 158

Query: 111 ---------NLVLREFSL--SHSEGYLWESF---DSPSDTILPGMKRGMNLRTGWNQ--- 153
                      V   + +         W +    +SP   +    K    +   W     
Sbjct: 159 LGSGKTWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSD 218

Query: 154 -------NIKAWNLEKSDTPQ--------LVL---WRRTEKVFRSWNGISGGCK-----R 190
                   I +   E     +        LVL           ++WN  +  CK     R
Sbjct: 219 HSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQNA-----KAWNAFNLSCKILLTTR 273

Query: 191 NWE-ADCGDG----EVFLMFEGIKL-PDKSE------FTCEFECSKYSSYVTN--ILYGI 236
             +  D         + L    + L PD+ +        C  +        TN   L  I
Sbjct: 274 FKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLTTNPRRLSII 333

Query: 237 ARVI----------LYLPEDSRLEIIHRDHKTS-NVLLDAEINPNISDFGPARIFGDQTE 285
           A  I           ++  D    II    ++S NVL  AE            +F     
Sbjct: 334 AESIRDGLATWDNWKHVNCDKLTTII----ESSLNVLEPAEYRKMFDRLS---VFPPSAH 386

Query: 286 EVTGRVIGTQTLKTVPELLQAWKLWSEGDPMEIIDE 321
                 I T  L     L+  W    + D M ++++
Sbjct: 387 ------IPTILL----SLI--WFDVIKSDVMVVVNK 410

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ... Length = 276

 Score = 43.3 bits (103), Expect = 5e-05
 Identities = 23/66 (34%), Positives = 29/66 (43%), Gaps = 16/66 (24%)

Query: 248 RLEIIHRDHKTSNVLLDAEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTV------- 300
            + I HRD K  N+LLD   N  ISDFG A +F     E        + L  +       
Sbjct: 123 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRE--------RLLNKMCGTLPYV 174

Query: 301 -PELLQ 305
            PELL+
Sbjct: 175 APELLK 180

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens} Length = 432

 Score = 44.0 bits (104), Expect = 5e-05
 Identities = 20/71 (28%), Positives = 29/71 (40%), Gaps = 10/71 (14%)

Query: 231 NILYGIARVILYLPEDSRLEIIHRDHKTSNVLL-----DAEINPNISDFGPARIFGDQTE 285
            +L      + +L     L I+HRD K  N+L+       +I   ISDFG  +       
Sbjct: 122 TLLQQTTSGLAHLHS---LNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRH 178

Query: 286 EVTGR--VIGT 294
             + R  V GT
Sbjct: 179 SFSRRSGVPGT 189

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens} Length = 353

 Score = 43.8 bits (104), Expect = 6e-05
 Identities = 17/60 (28%), Positives = 30/60 (50%), Gaps = 4/60 (6%)

Query: 232 ILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEINPNISDFGPARIFGDQ-TEEVTGR 290
           ++Y + + + Y+   S   ++HRD K  N+ ++ +    I DFG AR    + T  V  R
Sbjct: 131 LVYQMLKGLKYI--HSA-GVVHRDLKPGNLAVNEDCELKILDFGLARHADAEMTGYVVTR 187

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A* Length = 323

 Score = 43.5 bits (103), Expect = 6e-05
 Identities = 23/66 (34%), Positives = 29/66 (43%), Gaps = 16/66 (24%)

Query: 248 RLEIIHRDHKTSNVLLDAEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTV------- 300
            + I HRD K  N+LLD   N  ISDFG A +F     E        + L  +       
Sbjct: 123 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRE--------RLLNKMCGTLPYV 174

Query: 301 -PELLQ 305
            PELL+
Sbjct: 175 APELLK 180

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A Length = 377

 Score = 43.5 bits (102), Expect = 7e-05
 Identities = 9/55 (16%), Positives = 18/55 (32%), Gaps = 6/55 (10%)

Query: 251 IIHRDHKTSNVLLDAEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELLQ 305
           ++H   +  +++LD      ++ F      G +      R          PEL  
Sbjct: 227 LVHTYLRPVDIVLDQRGGVFLTGFEHLVRDGARVVSSVSRGFEP------PELEA 275

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii} Length = 458

 Score = 43.7 bits (103), Expect = 7e-05
 Identities = 17/71 (23%), Positives = 30/71 (42%), Gaps = 3/71 (4%)

Query: 232 ILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEINPNISDFGPARIFGDQTEEVTGRV 291
           +LY +   + Y+   S   I+HRD K +N L++ + +  + DFG AR         +   
Sbjct: 161 LLYNLLVGVKYV--HSA-GILHRDLKPANCLVNQDCSVKVCDFGLARTVDYPENGNSQLP 217

Query: 292 IGTQTLKTVPE 302
           I  +       
Sbjct: 218 ISPREDDMNLV 228

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ... Length = 420

 Score = 43.5 bits (103), Expect = 7e-05
 Identities = 36/145 (24%), Positives = 56/145 (38%), Gaps = 28/145 (19%)

Query: 227 SYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEINP-NISDFGPARIFGDQTE 285
            YV   +Y + R + Y+       I HRD K  N+LLD +     + DFG A+    + E
Sbjct: 156 IYVKLYMYQLFRSLAYI---HSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL-VRGE 211

Query: 286 EVTGRVIGTQTLKT----VPELLQAWK-------LWSEGDPM-EIIDEQTKMKGPFSADE 333
                +       +     PEL+           +WS G  + E++  Q    G    D+
Sbjct: 212 PNVSYIC------SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQ 265

Query: 334 LVKCIEV-GLLCVQQRIEDWPTMSS 357
           LV+ I+V G        E    M+ 
Sbjct: 266 LVEIIKVLG----TPTREQIREMNP 286

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} Length = 362

 Score = 43.4 bits (103), Expect = 8e-05
 Identities = 20/74 (27%), Positives = 27/74 (36%), Gaps = 18/74 (24%)

Query: 251 IIHRDHKTSNVLLDAEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKT----VPELLQA 306
           ++HRD    N+LL    +  I DF  AR         T  V             PEL+  
Sbjct: 155 VVHRDLHPGNILLADNNDITICDFNLARED-TADANKTHYVT------HRWYRAPELVMQ 207

Query: 307 WK-------LWSEG 313
           +K       +WS G
Sbjct: 208 FKGFTKLVDMWSAG 221

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A* Length = 353

 Score = 43.0 bits (102), Expect = 9e-05
 Identities = 23/79 (29%), Positives = 36/79 (45%), Gaps = 17/79 (21%)

Query: 251 IIHRDHKTSNVLLDAEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKT--V-------P 301
           +IHRD K SN+L+++  +  + DFG ARI  D++        G Q+     V       P
Sbjct: 133 VIHRDLKPSNLLINSNCDLKVCDFGLARII-DESAADNSEPTGQQSGMVEFVATRWYRAP 191

Query: 302 ELLQAWK-------LWSEG 313
           E++           +WS G
Sbjct: 192 EVMLTSAKYSRAMDVWSCG 210

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* Length = 310

 Score = 42.7 bits (101), Expect = 1e-04
 Identities = 14/44 (31%), Positives = 22/44 (50%), Gaps = 1/44 (2%)

Query: 251 IIHRDHKTSNVLLDAEINPNISDFGPARIFGDQTEEVTGRVIGT 294
           ++HRD K +NV + A     + D G  R F  +T      ++GT
Sbjct: 157 VMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHS-LVGT 199

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} Length = 319

 Score = 42.7 bits (101), Expect = 1e-04
 Identities = 22/90 (24%), Positives = 34/90 (37%), Gaps = 9/90 (10%)

Query: 229 VTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEINPNISDFGPARI----FGDQT 284
              I   I + + YL       I+H+D K+ NV  D      I+DFG   I       + 
Sbjct: 132 TRQIAQEIVKGMGYL---HAKGILHKDLKSKNVFYD-NGKVVITDFGLFSISGVLQAGRR 187

Query: 285 EEVTGRVIGTQTLKTVPELLQAWKLWSEGD 314
           E+      G       PE+++     +E D
Sbjct: 188 EDKLRIQNGW-LCHLAPEIIRQLSPDTEED 216

>1xd5_A Gastrodianin-1, antifungal protein GAFP-1; monocot mannose binding lectin, monomer, homogeneous beta- sheet; 2.00A {Gastrodia elata} SCOP: b.78.1.1 PDB: 1xd6_A Length = 112

 Score = 40.3 bits (94), Expect = 1e-04
 Identities = 25/112 (22%), Positives = 37/112 (33%), Gaps = 21/112 (18%)

Query: 32  DILLAPSTLWGGNSLIPGNSSQSF-----LVISYKNLPPLVIWVANRNGS---------I 77
           D L +   L  G SL  G           LV+   N     +W +  NG           
Sbjct: 2   DRLNSGHQLDTGGSLAEGGYLFIIQNDCNLVLYDNNRA---VWASGTNGKASGCVLKMQN 58

Query: 78  NSNLSQDNDLGIIWNVILPRATGSPALQLLVAGNLVLREFSLSHSEGYLWES 129
           + NL   +    IW     R  G+  L L    N+V+      +S   +W +
Sbjct: 59  DGNLVIYSGSRAIWASNTNRQNGNYYLILQRDRNVVIY----DNSNNAIWAT 106

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} Length = 311

 Score = 42.7 bits (101), Expect = 1e-04
 Identities = 17/101 (16%), Positives = 30/101 (29%), Gaps = 23/101 (22%)

Query: 251 IIHRDHKTSNVLLDAEINPNISDFGPARIFGDQTEEVTGRVIGTQ------------TLK 298
           ++H D K +N+ L       + DFG     G           G                 
Sbjct: 178 LVHLDVKPANIFLGPRGRCKLGDFGLLVELGTAGAGEV--QEGDPRYMAPELLQGSYGTA 235

Query: 299 --------TVPELLQAWKLWSEGDPMEIIDEQTKMKGPFSA 331
                   T+ E+    +L   G+  + +  Q  +   F+A
Sbjct: 236 ADVFSLGLTILEVACNMELPHGGEGWQQL-RQGYLPPEFTA 275

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3o71_A 3r63_A 3c9w_A* 2y9q_A* 3sa0_A* 1wzy_A* 2e14_A* 1tvo_A* 2ojg_A* 2oji_A* ... Length = 364

 Score = 43.0 bits (102), Expect = 1e-04
 Identities = 23/77 (29%), Positives = 33/77 (42%), Gaps = 20/77 (25%)

Query: 251 IIHRDHKTSNVLLDAEINPNISDFGPARIFGDQTEEV---TGRVIGTQTLKT----VPEL 303
           ++HRD K SN+LL+   +  I DFG AR+     +     T  V       T     PE+
Sbjct: 149 VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA------TRWYRAPEI 202

Query: 304 LQAWK-------LWSEG 313
           +   K       +WS G
Sbjct: 203 MLNSKGYTKSIDIWSVG 219

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus} Length = 332

 Score = 42.6 bits (100), Expect = 1e-04
 Identities = 12/38 (31%), Positives = 17/38 (44%)

Query: 251 IIHRDHKTSNVLLDAEINPNISDFGPARIFGDQTEEVT 288
           ++HRD K SN+    +    + DFG         EE T
Sbjct: 185 LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQT 222

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major} Length = 360

 Score = 42.7 bits (101), Expect = 1e-04
 Identities = 18/71 (25%), Positives = 27/71 (38%), Gaps = 13/71 (18%)

Query: 228 YVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEINPN-----ISDFGPARIFGD 282
            +   L+ + R I  L   S + + HRD K  NVL    +N       + DFG A+    
Sbjct: 130 LIKVFLFQLIRSIGCLHLPS-VNVCHRDIKPHNVL----VNEADGTLKLCDFGSAKKLSP 184

Query: 283 Q---TEEVTGR 290
                  +  R
Sbjct: 185 SEPNVAYICSR 195

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A Length = 328

 Score = 42.3 bits (100), Expect = 2e-04
 Identities = 16/35 (45%), Positives = 23/35 (65%)

Query: 248 RLEIIHRDHKTSNVLLDAEINPNISDFGPARIFGD 282
           +  I+HRD K  N+LLDA++N  I+DFG +  F  
Sbjct: 132 QKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTV 166

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens} Length = 278

 Score = 42.1 bits (100), Expect = 2e-04
 Identities = 26/80 (32%), Positives = 37/80 (46%), Gaps = 15/80 (18%)

Query: 196 CGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRD 255
           C +GE   M   +K   K  F+ E E   +       ++ I   +LYL       I+HRD
Sbjct: 93  CHNGE---MNRYLKNRVKP-FS-ENEARHF-------MHQIITGMLYL---HSHGILHRD 137

Query: 256 HKTSNVLLDAEINPNISDFG 275
              SN+LL   +N  I+DFG
Sbjct: 138 LTLSNLLLTRNMNIKIADFG 157

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe} Length = 336

 Score = 42.3 bits (100), Expect = 2e-04
 Identities = 17/35 (48%), Positives = 23/35 (65%)

Query: 248 RLEIIHRDHKTSNVLLDAEINPNISDFGPARIFGD 282
           R +I+HRD K  N+LLD  +N  I+DFG + I  D
Sbjct: 126 RHKIVHRDLKPENLLLDDNLNVKIADFGLSNIMTD 160

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens} Length = 335

 Score = 41.6 bits (98), Expect = 2e-04
 Identities = 11/35 (31%), Positives = 17/35 (48%)

Query: 248 RLEIIHRDHKTSNVLLDAEINPNISDFGPARIFGD 282
             +IIHRD K  N+++  +    + DFG A     
Sbjct: 148 LKDIIHRDIKDENIVIAEDFTIKLIDFGSAAYLER 182

>1kj1_A Lectin I, lecgna 1; BULB lectin, mannose, plant protein; HET: MAN; 2.20A {Allium sativum} SCOP: b.78.1.1 PDB: 1bwu_P* 1kj1_D* 1bwu_Q* 1bwu_A* 1bwu_D* Length = 109

 Score = 39.4 bits (92), Expect = 2e-04
 Identities = 19/100 (19%), Positives = 30/100 (30%), Gaps = 19/100 (19%)

Query: 31  RDILLAPSTLWGGNSLIPGNSSQSF-----LVISYKNLPPLVIWVANRNGSINSNLS--- 82
           R++L     L+ G SL              LV+   +      W +N             
Sbjct: 1   RNLLTNGEGLYAGQSLDVEPYHFIMQEDCNLVLYDHSTSV---WASNTGILGKKGCKAVL 57

Query: 83  --------QDNDLGIIWNVILPRATGSPALQLLVAGNLVL 114
                    D +   +W     R  G+  L L   GN+V+
Sbjct: 58  QSDGNFVVYDAEGRSLWASHSVRGNGNYVLVLQEDGNVVI 97

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens} Length = 320

 Score = 41.5 bits (98), Expect = 2e-04
 Identities = 20/78 (25%), Positives = 33/78 (42%), Gaps = 21/78 (26%)

Query: 251 IIHRDHKTSNVLLDAEINPN----ISDFGPARIFGDQTEEVTGRVIGTQTLKT----VPE 302
           ++HRD K +N+ ++ E   +    I DFG ARI          +   ++ L T     P 
Sbjct: 141 VLHRDLKPANLFINTE---DLVLKIGDFGLARIMDPHYSH---KGHLSEGLVTKWYRSPR 194

Query: 303 LLQAWK-------LWSEG 313
           LL +         +W+ G
Sbjct: 195 LLLSPNNYTKAIDMWAAG 212

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A Length = 290

 Score = 41.5 bits (98), Expect = 3e-04
 Identities = 23/70 (32%), Positives = 34/70 (48%), Gaps = 8/70 (11%)

Query: 231 NILYGIARVIL----YLPEDSRLEIIHRDHKTSNVLLDAEINPNISDFGPARIFGDQTEE 286
           +IL  IA  I+    +L   S+L +IHRD K SNVL++A     + DFG +    D   +
Sbjct: 109 DILGKIAVSIVKALEHL--HSKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDDVAK 166

Query: 287 VTGRVIGTQT 296
                 G + 
Sbjct: 167 DI--DAGCKP 174

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus} Length = 476

 Score = 42.1 bits (99), Expect = 3e-04
 Identities = 17/35 (48%), Positives = 23/35 (65%)

Query: 248 RLEIIHRDHKTSNVLLDAEINPNISDFGPARIFGD 282
           R  ++HRD K  NVLLDA +N  I+DFG + +  D
Sbjct: 134 RHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSD 168

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A* Length = 276

 Score = 41.4 bits (98), Expect = 3e-04
 Identities = 17/35 (48%), Positives = 23/35 (65%)

Query: 248 RLEIIHRDHKTSNVLLDAEINPNISDFGPARIFGD 282
           R  ++HRD K  NVLLDA +N  I+DFG + +  D
Sbjct: 129 RHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSD 163

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A* Length = 294

 Score = 41.4 bits (98), Expect = 3e-04
 Identities = 11/25 (44%), Positives = 16/25 (64%)

Query: 251 IIHRDHKTSNVLLDAEINPNISDFG 275
           +IHRD K  N+ L+ ++   I DFG
Sbjct: 136 VIHRDLKLGNLFLNEDLEVKIGDFG 160

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A* Length = 335

 Score = 41.5 bits (98), Expect = 3e-04
 Identities = 11/25 (44%), Positives = 16/25 (64%)

Query: 251 IIHRDHKTSNVLLDAEINPNISDFG 275
           +IHRD K  N+ L+ ++   I DFG
Sbjct: 162 VIHRDLKLGNLFLNEDLEVKIGDFG 186

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A* Length = 432

 Score = 41.3 bits (97), Expect = 4e-04
 Identities = 20/91 (21%), Positives = 31/91 (34%), Gaps = 27/91 (29%)

Query: 250 EIIHRDHKTSNVLLDAEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTV--------- 300
            IIHRD K +N LL+ + +  + DFG AR    + +      +                 
Sbjct: 149 GIIHRDLKPANCLLNQDCSVKVCDFGLARTINSEKDTNIVNDLEENEEPGPHNKNLKKQL 208

Query: 301 -----------PELLQAWK-------LWSEG 313
                      PEL+   +       +WS G
Sbjct: 209 TSHVVTRWYRAPELILLQENYTKSIDIWSTG 239

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A* Length = 299

 Score = 40.8 bits (96), Expect = 4e-04
 Identities = 14/65 (21%), Positives = 21/65 (32%), Gaps = 10/65 (15%)

Query: 251 IIHRDHKTSNVLLDAEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTV---------- 300
           ++HRD K SN+    +    + DFG         EE T         +            
Sbjct: 139 LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMS 198

Query: 301 PELLQ 305
           PE + 
Sbjct: 199 PEQIH 203

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A Length = 361

 Score = 41.2 bits (97), Expect = 4e-04
 Identities = 14/37 (37%), Positives = 18/37 (48%), Gaps = 2/37 (5%)

Query: 248 RLEIIHRDHKTSNVLLDAEINPN--ISDFGPARIFGD 282
            ++I HRD K  N LLD    P   I DFG ++    
Sbjct: 134 SMQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVL 170

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II} Length = 388

 Score = 41.2 bits (97), Expect = 4e-04
 Identities = 21/90 (23%), Positives = 33/90 (36%), Gaps = 26/90 (28%)

Query: 250 EIIHRDHKTSNVLLDAEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTV--------- 300
            ++HRD K SN+LL+AE +  ++DFG +R F +         +                 
Sbjct: 129 GLLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQPILT 188

Query: 301 ----------PELLQAWK-------LWSEG 313
                     PE+L           +WS G
Sbjct: 189 DYVATRWYRAPEILLGSTKYTKGIDMWSLG 218

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* Length = 360

 Score = 41.0 bits (96), Expect = 5e-04
 Identities = 16/65 (24%), Positives = 34/65 (52%), Gaps = 5/65 (7%)

Query: 232 ILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEINPNISDFGPARIFGDQTEEVTGRV 291
           +   + + + YL    + +I+HRD K SN+L+++     + DFG   + G   + +    
Sbjct: 136 VSIAVIKGLTYL--REKHKIMHRDVKPSNILVNSRGEIKLCDFG---VSGQLIDSMANSF 190

Query: 292 IGTQT 296
           +GT++
Sbjct: 191 VGTRS 195

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens} Length = 396

 Score = 41.0 bits (96), Expect = 5e-04
 Identities = 22/103 (21%), Positives = 43/103 (41%), Gaps = 19/103 (18%)

Query: 196 CGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRD 255
           C  G ++     ++ P  +    E E       + +++ G+     +L E     I+HR+
Sbjct: 91  CPCGSLY---TVLEEPSNAYGLPESEFLIV---LRDVVGGMN----HLRE---NGIVHRN 137

Query: 256 HKTSNVLLDAEINPN----ISDFGPARIFGDQTEEVTGRVIGT 294
            K  N++     +      ++DFG AR   D  + V+  + GT
Sbjct: 138 IKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVS--LYGT 178

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ... Length = 373

 Score = 40.8 bits (96), Expect = 6e-04
 Identities = 32/122 (26%), Positives = 58/122 (47%), Gaps = 17/122 (13%)

Query: 231 NILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEINPNISDFGPARIFGDQTEEVTGR 290
            +L GIA  + YL   S +  +HRD    N+L+++ +   +SDFG  R+  D  E     
Sbjct: 151 GMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTT 207

Query: 291 VIGTQTLK-TVPELLQAWK------LWSEGDPM-EIIDEQTKMKGPF---SADELVKCIE 339
             G   ++ T PE +   K      +WS G  + E++   +  + P+   S  +++K ++
Sbjct: 208 RGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVM---SYGERPYWEMSNQDVIKAVD 264

Query: 340 VG 341
            G
Sbjct: 265 EG 266

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens} Length = 319

 Score = 40.5 bits (95), Expect = 6e-04
 Identities = 14/48 (29%), Positives = 24/48 (50%), Gaps = 6/48 (12%)

Query: 251 IIHRDHKTSNVLLDAEINPN----ISDFGPARIFGDQTEEVTGRVIGT 294
           I+HR+ K  N++     +      ++DFG AR   D  + V+  + GT
Sbjct: 133 IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVS--LYGT 178

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens} Length = 384

 Score = 40.0 bits (94), Expect = 8e-04
 Identities = 16/38 (42%), Positives = 23/38 (60%)

Query: 251 IIHRDHKTSNVLLDAEINPNISDFGPARIFGDQTEEVT 288
           IIHRD K  N+LLD   + +I+DF  A +   +T+  T
Sbjct: 136 IIHRDMKPDNILLDEHGHVHITDFNIAAMLPRETQITT 173

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A* Length = 327

 Score = 40.0 bits (94), Expect = 9e-04
 Identities = 18/44 (40%), Positives = 24/44 (54%), Gaps = 2/44 (4%)

Query: 232 ILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEINPNISDFG 275
           I     + + +L     L+IIHRD K SN+LLD   N  + DFG
Sbjct: 130 ITLATVKALNHL--KENLKIIHRDIKPSNILLDRSGNIKLCDFG 171

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis} Length = 681

 Score = 40.2 bits (94), Expect = 9e-04
 Identities = 10/44 (22%), Positives = 17/44 (38%), Gaps = 6/44 (13%)

Query: 251 IIHRDHKTSNVLLDAEINPNISDFGPARIFGDQTEEVTGRVIGT 294
           +++ D K  N++L  E    + D G             G + GT
Sbjct: 203 LVYNDLKPENIMLTEE-QLKLIDLGAVSRINS-----FGYLYGT 240

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	392
3omv_A	307	RAF proto-oncogene serine/threonine-protein kinas;	99.97
4asz_A	299	BDNF/NT-3 growth factors receptor; transferase, TR	99.96
4aoj_A	329	High affinity nerve growth factor receptor; transf	99.96
4gt4_A	308	Tyrosine-protein kinase transmembrane receptor RO;	99.96
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	99.96
3hmm_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	99.95
4ase_A	353	Vascular endothelial growth factor receptor 2; tra	99.95
4fih_A	346	Serine/threonine-protein kinase PAK 4; kinase doma	99.95
4aw0_A	311	HPDK1, 3-phosphoinositide-dependent protein kinase	99.95
4b9d_A	350	Serine/threonine-protein kinase NEK1; transferase,	99.95
4fie_A	423	Serine/threonine-protein kinase PAK 4; kinase doma	99.95
3ubd_A	304	Ribosomal protein S6 kinase alpha-3; kinase-inhibi	99.95
3fpq_A	290	Serine/threonine-protein kinase WNK1; protein seri	99.95
3hyh_A	275	Carbon catabolite-derepressing protein kinase; kin	99.95
3m7h_A	276	Putidacin L1; monocot mannose-binding lectin, bact	99.93
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	99.93
4b99_A	398	Mitogen-activated protein kinase 7; transferase, i	99.92
4f9c_A	361	Cell division cycle 7-related protein kinase; Ser/	99.92
3v5w_A	689	G-protein coupled receptor kinase 2; inhibitor com	99.91
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	99.91
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	99.91
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	99.89
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	99.89
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	99.89
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	99.89
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	99.89
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	99.89
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	99.89
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	99.88
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	99.88
3q4u_A	301	Activin receptor type-1; structural genomics conso	99.88
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	99.88
3soc_A	322	Activin receptor type-2A; structural genomics cons	99.88
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	99.88
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	99.88
3zgw_A	347	Maternal embryonic leucine zipper kinase; transfer	99.87
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	99.87
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	99.87
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	99.87
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	99.87
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	99.87
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	99.87
4hcu_A	269	Tyrosine-protein kinase ITK/TSK; transferase-trans	99.87
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	99.87
3op5_A	364	Serine/threonine-protein kinase VRK1; adenosine tr	99.87
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	99.87
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	99.87
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	99.87
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	99.87
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	99.87
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	99.87
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	99.87
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	99.87
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	99.87
1csn_A	298	Casein kinase-1; phosphotransferase; HET: ATP; 2.0	99.87
3niz_A	311	Rhodanese family protein; structural genomics, str	99.87
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	99.86
2izr_A	330	Casein kinase I isoform gamma-3; serine/threonine-	99.86
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	99.86
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	99.86
2v62_A	345	Serine/threonine-protein kinase VRK2; transferase,	99.86
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	99.86
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	99.86
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	99.86
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	99.86
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	99.86
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	99.86
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	99.86
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	99.86
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	99.86
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	99.86
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	99.86
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	99.86
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	99.86
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	99.86
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	99.86
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	99.86
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	99.86
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	99.86
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	99.86
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	99.85
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	99.85
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	99.85
3o0g_A	292	Cell division protein kinase 5; kinase activator c	99.85
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	99.85
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	99.85
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	99.85
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	99.85
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	99.85
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	99.85
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	99.85
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	99.85
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	99.85
4hgt_A	296	Casein kinase I isoform delta; CK1D, inhibitor, tr	99.85
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	99.85
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	99.85
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	99.85
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	99.85
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	99.85
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	99.85
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	99.85
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	99.85
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	99.85
3pls_A	298	Macrophage-stimulating protein receptor; protein k	99.85
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	99.85
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	99.85
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	99.85
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	99.85
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	99.85
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	99.85
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	99.85
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	99.85
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	99.85
3uzp_A	296	CKI-delta, CKID, casein kinase I isoform delta; CK	99.85
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	99.85
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	99.85
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	99.85
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	99.85
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	99.84
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	99.84
3ork_A	311	Serine/threonine protein kinase; structural genomi	99.84
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	99.84
4fl3_A	635	Tyrosine-protein kinase SYK; transferase; HET: ANP	99.84
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	99.84
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	99.84
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	99.84
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	99.84
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	99.84
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	99.84
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	99.84
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	99.84
1dlp_A	236	Lectin scafet precursor; two-domain lectin, beta p	99.84
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	99.84
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	99.84
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	99.84
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	99.84
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	99.84
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	99.84
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	99.84
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	99.84
3sv0_A	483	Casein kinase I-like; typical kinase domain fold,	99.84
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	99.84
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	99.84
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	99.84
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	99.84
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	99.84
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	99.84
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	99.84
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	99.84
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	99.84
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	99.84
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	99.84
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	99.83
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	99.83
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	99.83
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	99.83
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	99.83
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	99.83
3rp9_A	458	Mitogen-activated protein kinase; structural genom	99.83
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	99.83
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	99.83
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	99.83
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	99.83
2jii_A	352	Serine/threonine-protein kinase VRK3 molecule: VA	99.83
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	99.83
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	99.83
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	99.83
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	99.83
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	99.83
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	99.83
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	99.83
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	99.83
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	99.83
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	99.83
2eu9_A	355	Dual specificity protein kinase CLK3; kinase domai	99.82
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	99.82
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	99.82
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	99.82
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	99.82
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	99.82
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	99.82
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	99.82
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	99.82
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	99.82
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	99.82
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	99.82
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	99.82
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	99.82
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	99.82
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	99.82
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	99.82
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	99.82
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	99.82
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	99.82
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	99.82
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	99.82
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	99.82
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	99.82
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	99.82
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	99.82
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	99.81
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	99.81
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	99.81
3fme_A	290	Dual specificity mitogen-activated protein kinase;	99.81
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	99.81
3bhy_A	283	Death-associated protein kinase 3; death associate	99.81
2a19_B	284	Interferon-induced, double-stranded RNA-activated	99.81
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	99.81
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	99.81
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	99.81
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	99.81
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	99.81
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	99.81
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	99.81
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	99.81
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	99.81
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	99.81
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	99.81
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	99.81
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	99.81
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	99.81
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	99.81
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	99.81
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	99.8
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	99.8
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	99.8
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	99.8
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	99.8
3an0_A	340	Dual specificity mitogen-activated protein kinase;	99.8
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	99.8
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	99.8
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	99.8
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	99.8
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	99.8
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	99.8
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	99.79
2dyl_A	318	Dual specificity mitogen-activated protein kinase	99.79
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	99.79
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	99.79
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	99.78
4exu_A	371	Mitogen-activated protein kinase 13; P38 kinase, t	99.78
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	99.78
4azs_A	569	Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15	99.78
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	99.77
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	99.77
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	99.77
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	99.76
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	99.76
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	99.76
3aln_A	327	Dual specificity mitogen-activated protein kinase;	99.76
3uqc_A	286	Probable conserved transmembrane protein; structur	99.72
2vuw_A	336	Serine/threonine-protein kinase haspin; cell cycle	99.71
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	99.69
3a0c_A	110	Mannose/sialic acid-binding lectin; beta-prism II,	99.44
3en9_A	540	Glycoprotease, O-sialoglycoprotein endopeptidase/p	99.43
1b2p_A	119	Protein (lectin); mannose-binding lectin, monocot,	99.43
4h3o_A	105	Lectin; cadmium, plant protein; 2.17A {Allium sati	99.42
2dpf_A	115	Curculin; sweet taste, taste modifying, plant prot	99.35
1xd5_A	112	Gastrodianin-1, antifungal protein GAFP-1; monocot	99.31
1zar_A	282	RIO2 kinase; serine kinase, winged-helix, RIO doma	99.16
3dzw_A	109	Agglutinin; lectin, mannobiose, mannose-alpha1, 3-	99.09
1zth_A	258	RIO1 serine protein kinase; ribosome biogenesis, r	99.02
1xd5_A	112	Gastrodianin-1, antifungal protein GAFP-1; monocot	98.94
3a0c_A	110	Mannose/sialic acid-binding lectin; beta-prism II,	98.83
2dpf_A	115	Curculin; sweet taste, taste modifying, plant prot	98.82
3mez_B	113	Mannose-specific lectin 3 chain 2; heterotetramer,	98.8
1b2p_A	119	Protein (lectin); mannose-binding lectin, monocot,	98.79
3r0e_B	110	Lectin; carbohydrate binding, carbohydrate, sugar	98.79
3r0e_A	109	Lectin; carbohydrate binding, carbohydrate, sugar	98.53
4gyi_A	397	RIO2 kinase; protein kinase, ADP complex, phosphoa	98.51
3mez_A	111	Mannose-specific lectin 3 chain 1; heterotetramer,	98.19
3m7h_A	276	Putidacin L1; monocot mannose-binding lectin, bact	98.14
3mez_B	113	Mannose-specific lectin 3 chain 2; heterotetramer,	98.0
3mez_A	111	Mannose-specific lectin 3 chain 1; heterotetramer,	97.94
3dzw_A	109	Agglutinin; lectin, mannobiose, mannose-alpha1, 3-	97.9
3r0e_B	110	Lectin; carbohydrate binding, carbohydrate, sugar	97.85
4h3o_A	105	Lectin; cadmium, plant protein; 2.17A {Allium sati	97.51
1nd4_A	264	Aminoglycoside 3'-phosphotransferase; protein kina	97.48
3tm0_A	263	Aminoglycoside 3'-phosphotransferase; protein kina	97.43
3r0e_A	109	Lectin; carbohydrate binding, carbohydrate, sugar	97.4
3dxp_A	359	Putative acyl-COA dehydrogenase; protein kinase-li	97.3
1dlp_A	236	Lectin scafet precursor; two-domain lectin, beta p	97.16
3sg8_A	304	APH(2'')-ID; antibiotic resistance enzyme, transfe	96.22
3r70_A	320	Aminoglycoside phosphotransferase; structural geno	95.65
3tdw_A	306	Gentamicin resistance protein; kinase, phosphoryl	94.42
3ats_A	357	Putative uncharacterized protein; hypothetical pro	93.08
3ovc_A	362	Hygromycin-B 4-O-kinase; aminoglycoside phosphotra	93.02
2q83_A	346	YTAA protein; 2635576, structural genomics, joint	91.38
2pyw_A	420	Uncharacterized protein; 5-methylthioribose kinase	87.1
2ppq_A	322	HSK, HK, homoserine kinase; structural genomics, M	82.06
3csv_A	333	Aminoglycoside phosphotransferase; YP_614837.1, ph	82.05
4gkh_A	272	Aminoglycoside 3'-phosphotransferase APHA1-IAB; py	80.72

>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}

Probab=99.97  E-value=2.6e-32  Score=258.51  Aligned_cols=181  Identities=17%  Similarity=0.163  Sum_probs=138.8

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEc
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLD  264 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~  264 (392)
                      |++.++.... |.++..|+|||||++|+|............+..+++|+.|||+||.|||++   +|+||||||+|||++
T Consensus        91 HpNIV~l~g~-~~~~~~~iVmEy~~gGsL~~~l~~~~~~l~~~~~~~i~~qia~gL~yLH~~---~IiHRDlKp~NILl~  166 (307)
T 3omv_A           91 HVNILLFMGY-MTKDNLAIVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHAK---NIIHRDMKSNNIFLH  166 (307)
T ss_dssp             CTTBCCEEEE-ECSSSCEEEEECCSSCBHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCCSSSEEEE
T ss_pred             CCCEeeEEEE-EECCeEEEEEEcCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CccCCccCHHHEEEC
Confidence            8888887764 556789999999999999887655544456666899999999999999998   899999999999999


Q ss_pred             CCCCCeEeeeeceEEeCC-CCcceeceeeecccccCchhHH---------HHHHHhcCCCcc-eeecccccCCCCCCH--
Q 045577          265 AEINPNISDFGPARIFGD-QTEEVTGRVIGTQTLKTVPELL---------QAWKLWSEGDPM-EIIDEQTKMKGPFSA--  331 (392)
Q Consensus       265 ~~~~~kl~DFGla~~~~~-~~~~~~~~~~gt~~y~a~~~~~---------~~~diws~G~v~-~~ld~~~~~~~~~~~--  331 (392)
                      .++.+||+|||+|+.... ..........||+.||| ||+.         .+.|+||+|+++ |++.++.++.+..+.  
T Consensus       167 ~~~~~Ki~DFGla~~~~~~~~~~~~~~~~GT~~ymA-PE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~~~~  245 (307)
T 3omv_A          167 EGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMA-PEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQ  245 (307)
T ss_dssp             TTEEEEECCCSSCBC------------CCCCTTSCC-HHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHH
T ss_pred             CCCcEEEeeccCceecccCCcceeecccccCCCccC-HHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCChHHH
Confidence            999999999999987542 22233445689999999 7765         378999999977 566665444332222  


Q ss_pred             -------------------HHHHHHHHHHHhhcccCcCCCCCHHHHHHHHccCCCCCC
Q 045577          332 -------------------DELVKCIEVGLLCVQQRIEDWPTMSSVLTMLSNESIKVP  370 (392)
Q Consensus       332 -------------------~~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~L~~~~~~~~  370 (392)
                                         +....+.+++..||+.||++||||.+|++.|+.....+|
T Consensus       246 ~~~~~~~~~~~p~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~Le~l~~~lp  303 (307)
T 3omv_A          246 IIFMVGRGYASPDLSKLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQHSLP  303 (307)
T ss_dssp             HHHHHHTTCCCCCSTTSCTTSCHHHHHHHHHHTCSSSTTSCCHHHHHHHHHHHHTTCC
T ss_pred             HHHHHhcCCCCCCcccccccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhccCC
Confidence                               122356678889999999999999999999987644443

>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*

Probab=99.96  E-value=6.8e-31  Score=248.30  Aligned_cols=177  Identities=21%  Similarity=0.245  Sum_probs=139.2

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhh------------ccccchhhhhHHHHHHHhhhhcCcCCCCcee
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFE------------CSKYSSYVTNILYGIARVILYLPEDSRLEII  252 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~------------~~~~~~~~~~i~~~ia~gL~yLH~~~~~~ii  252 (392)
                      |++.|+......+++..|+|||||++|+|.....+..            ....+..+++|+.|||+||.|||++   +|+
T Consensus        74 HpnIV~l~g~~~~~~~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~ii  150 (299)
T 4asz_A           74 HEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQ---HFV  150 (299)
T ss_dssp             CTTBCCEEEEECSSSSEEEEEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHT---TCC
T ss_pred             CCCCccEEEEEeeCCEEEEEEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhC---Ccc
Confidence            8888888877666678999999999999988664432            1235556899999999999999998   899


Q ss_pred             ecccccceeEEcCCCCCeEeeeeceEEeCCCC-cceeceeeecccccCchhHH------HHHHHhcCCCcc-eeec-ccc
Q 045577          253 HRDHKTSNVLLDAEINPNISDFGPARIFGDQT-EEVTGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIID-EQT  323 (392)
Q Consensus       253 HrDlKp~NIll~~~~~~kl~DFGla~~~~~~~-~~~~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld-~~~  323 (392)
                      ||||||+|||++.++.+||+|||+|+...... ........||+.||| ||+.      .+.|+||.|+++ |++. ++.
T Consensus       151 HRDlKp~NILl~~~~~~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymA-PE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~  229 (299)
T 4asz_A          151 HRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMP-PESIMYRKFTTESDVWSLGVVLWEIFTYGKQ  229 (299)
T ss_dssp             CSCCSGGGEEECGGGCEEECCCSCHHHHTGGGCEEETTTEEECGGGCC-HHHHHHCCCCHHHHHHHHHHHHHHHHTTTCC
T ss_pred             cCccCHhhEEECCCCcEEECCcccceecCCCCceeecCceecChhhcC-HHHHcCCCCCchhhHHHHHHHHHHHHcCCCC
Confidence            99999999999999999999999998654222 222334679999999 7766      478999999987 5665 444


Q ss_pred             cCCCCC----------------CHHHHHHHHHHHHhhcccCcCCCCCHHHHHHHHccC
Q 045577          324 KMKGPF----------------SADELVKCIEVGLLCVQQRIEDWPTMSSVLTMLSNE  365 (392)
Q Consensus       324 ~~~~~~----------------~~~~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~L~~~  365 (392)
                      ++.+..                +......+.+++..||+.||++||||.+|++.|++.
T Consensus       230 Pf~~~~~~~~~~~i~~~~~~~~p~~~~~~~~~li~~cl~~dP~~RPs~~~i~~~L~~~  287 (299)
T 4asz_A          230 PWYQLSNNEVIECITQGRVLQRPRTCPQEVYELMLGCWQREPHMRKNIKGIHTLLQNL  287 (299)
T ss_dssp             TTTTSCHHHHHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             CCCCCCHHHHHHHHHcCCCCCCCccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHH
Confidence            433221                122233567788899999999999999999999876

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}

Probab=99.96  E-value=1.6e-30  Score=248.97  Aligned_cols=177  Identities=19%  Similarity=0.189  Sum_probs=131.7

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhh--------------ccccchhhhhHHHHHHHhhhhcCcCCCCc
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFE--------------CSKYSSYVTNILYGIARVILYLPEDSRLE  250 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~--------------~~~~~~~~~~i~~~ia~gL~yLH~~~~~~  250 (392)
                      |++.|+......+++..|+|||||++|+|.....+..              ....+..+++|+.|||+||.|||+.   +
T Consensus       102 HpnIV~l~g~~~~~~~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~  178 (329)
T 4aoj_A          102 HQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGL---H  178 (329)
T ss_dssp             CTTBCCEEEEECSSSSEEEEEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHHT---T
T ss_pred             CCCCCcEEEEEEECCEEEEEEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhcC---C
Confidence            8999998887666778999999999999987554321              1234555889999999999999998   8


Q ss_pred             eeecccccceeEEcCCCCCeEeeeeceEEeCCC-CcceeceeeecccccCchhHH------HHHHHhcCCCcc-eeec-c
Q 045577          251 IIHRDHKTSNVLLDAEINPNISDFGPARIFGDQ-TEEVTGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIID-E  321 (392)
Q Consensus       251 iiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~-~~~~~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld-~  321 (392)
                      |+||||||+|||++.++.+||+|||+++..... .........||+.||| ||+.      .+.|+||+|+++ |++. +
T Consensus       179 iiHRDLKp~NILl~~~~~~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymA-PE~~~~~~~~~~sDvwS~Gvvl~Ellt~G  257 (329)
T 4aoj_A          179 FVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMP-PESILYRKFTTESDVWSFGVVLWEIFTYG  257 (329)
T ss_dssp             CCCSCCCGGGEEEETTTEEEECCCC----------------CCCCGGGCC-HHHHTTCCCCHHHHHHHHHHHHHHHHTTS
T ss_pred             eecccccHhhEEECCCCcEEEcccccceeccCCCcceecCcccccccccC-hhhhcCCCCCccccccchHHHHHHHHcCC
Confidence            999999999999999999999999999876522 2223344679999999 7765      478999999987 5665 4


Q ss_pred             cccCCCCC----------------CHHHHHHHHHHHHhhcccCcCCCCCHHHHHHHHccC
Q 045577          322 QTKMKGPF----------------SADELVKCIEVGLLCVQQRIEDWPTMSSVLTMLSNE  365 (392)
Q Consensus       322 ~~~~~~~~----------------~~~~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~L~~~  365 (392)
                      +.++.+..                +......+.+++.+||+.||++||||.||++.|+..
T Consensus       258 ~~Pf~~~~~~~~~~~i~~g~~~~~p~~~~~~~~~li~~cl~~dP~~RPs~~ei~~~L~~l  317 (329)
T 4aoj_A          258 KQPWYQLSNTEAIDCITQGRELERPRACPPEVYAIMRGCWQREPQQRHSIKDVHARLQAL  317 (329)
T ss_dssp             CCTTCSSCHHHHHHHHHHTCCCCCCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHHHHHHH
T ss_pred             CCCCCCCCHHHHHHHHHcCCCCCCcccccHHHHHHHHHHcCcChhHCcCHHHHHHHHHHH
Confidence            43333221                112223566788899999999999999999999886

>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A

Probab=99.96  E-value=1.9e-30  Score=246.23  Aligned_cols=177  Identities=19%  Similarity=0.191  Sum_probs=137.8

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhh---------------ccccchhhhhHHHHHHHhhhhcCcCCCC
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFE---------------CSKYSSYVTNILYGIARVILYLPEDSRL  249 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~---------------~~~~~~~~~~i~~~ia~gL~yLH~~~~~  249 (392)
                      |++.++.......++..|+|||||++|+|........               ....+..+++|+.|||+||.|||++   
T Consensus        88 HpNIV~l~g~~~~~~~~~lV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---  164 (308)
T 4gt4_A           88 HPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSH---  164 (308)
T ss_dssp             CTTBCCEEEEECSSSSCEEEEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHHT---
T ss_pred             CCCCCCcceEEEECCEEEEEEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhC---
Confidence            8888888777666678999999999999988654322               1124455789999999999999998   


Q ss_pred             ceeecccccceeEEcCCCCCeEeeeeceEEeCC-CCcceeceeeecccccCchhHH------HHHHHhcCCCcc-eeec-
Q 045577          250 EIIHRDHKTSNVLLDAEINPNISDFGPARIFGD-QTEEVTGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIID-  320 (392)
Q Consensus       250 ~iiHrDlKp~NIll~~~~~~kl~DFGla~~~~~-~~~~~~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld-  320 (392)
                      +||||||||+|||+++++.+||+|||+++.... ..........||+.||| ||+.      .+.|+||+|+++ |++. 
T Consensus       165 ~iiHRDLK~~NILl~~~~~~Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymA-PE~l~~~~~s~ksDVwSfGvvl~El~t~  243 (308)
T 4gt4_A          165 HVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSLLPIRWMA-PEAIMYGKFSIDSDIWSYGVVLWEVFSY  243 (308)
T ss_dssp             TCCCSCCSGGGEEECGGGCEEECCSCCBCGGGGGGCBCSSSSSCBCGGGCC-HHHHHHCCCCHHHHHHHHHHHHHHHHTT
T ss_pred             CCCCCCccccceEECCCCCEEECCcccceeccCCCceeEecccccCCcccC-HHHHhCCCCCccchhhhHHHHHHHHHhC
Confidence            899999999999999999999999999986542 22223344679999999 7765      478999999987 5665 


Q ss_pred             ccccCCCC----------------CCHHHHHHHHHHHHhhcccCcCCCCCHHHHHHHHccC
Q 045577          321 EQTKMKGP----------------FSADELVKCIEVGLLCVQQRIEDWPTMSSVLTMLSNE  365 (392)
Q Consensus       321 ~~~~~~~~----------------~~~~~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~L~~~  365 (392)
                      +..++.+.                .+.+....+.+++..||+.||++||||.+|++.|+..
T Consensus       244 g~~Pf~~~~~~~~~~~i~~~~~~~~p~~~~~~~~~li~~C~~~dP~~RPs~~ei~~~L~a~  304 (308)
T 4gt4_A          244 GLQPYCGYSNQDVVEMIRNRQVLPCPDDCPAWVYALMIECWNEFPSRRPRFKDIHSRLRAW  304 (308)
T ss_dssp             TCCTTTTCCHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTS
T ss_pred             CCCCCCCCCHHHHHHHHHcCCCCCCcccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHhc
Confidence            33333221                1222334567788999999999999999999999864

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*

Probab=99.96  E-value=4e-30  Score=246.03  Aligned_cols=176  Identities=16%  Similarity=0.137  Sum_probs=135.8

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEc
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLD  264 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~  264 (392)
                      |++.|+.......++..|+|||||++|+|.....+..++ .+..+..|+.||+.||.|||++   +|+||||||+|||++
T Consensus       109 HpnIV~l~~~~~~~~~~~ivmEy~~gg~L~~~l~~~~~l-~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~  184 (336)
T 4g3f_A          109 SPRIVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMGCL-PEDRALYYLGQALEGLEYLHTR---RILHGDVKADNVLLS  184 (336)
T ss_dssp             CTTBCCEEEEEEETTEEEEEECCCTTCBHHHHHHHHSSC-CHHHHHHHHHHHHHHHHHHHTT---TEECSCCCGGGEEEC
T ss_pred             CCCCCcEEEEEEECCEEEEEEeccCCCcHHHHHHHcCCC-CHHHHHHHHHHHHHHHHHHHHC---CceecccCHHHEEEe
Confidence            888888877665567899999999999998877655443 4555889999999999999998   899999999999999


Q ss_pred             CCC-CCeEeeeeceEEeCCCCc----ceeceeeecccccCchhHH------HHHHHhcCCCcc-eeecccccCCCCCC--
Q 045577          265 AEI-NPNISDFGPARIFGDQTE----EVTGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIIDEQTKMKGPFS--  330 (392)
Q Consensus       265 ~~~-~~kl~DFGla~~~~~~~~----~~~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld~~~~~~~~~~--  330 (392)
                      .++ .+||+|||+|+.+.....    ......+||+.||| ||+.      .+.|+|+.|+++ +++.+.+++.+...  
T Consensus       185 ~~g~~vKl~DFGla~~~~~~~~~~~~~~~~~~~GT~~YmA-PE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~  263 (336)
T 4g3f_A          185 SDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMA-PEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGP  263 (336)
T ss_dssp             TTSCCEEECCCTTCEEC------------CCCCCCGGGCC-HHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCCSC
T ss_pred             CCCCEEEEeeCCCCeEccCCCcccceecCCccccCccccC-HHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHH
Confidence            887 699999999998752211    12233679999999 7766      378999999987 56666555433211  


Q ss_pred             ----------------HHHHHHHHHHHHhhcccCcCCCCCHHHHHHHHccC
Q 045577          331 ----------------ADELVKCIEVGLLCVQQRIEDWPTMSSVLTMLSNE  365 (392)
Q Consensus       331 ----------------~~~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~L~~~  365 (392)
                                      ......+.+++..|++.||++|||+.|+++.|...
T Consensus       264 ~~~~i~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~sa~el~~~l~~~  314 (336)
T 4g3f_A          264 LCLKIASEPPPIREIPPSCAPLTAQAIQEGLRKEPVHRASAMELRRKVGKA  314 (336)
T ss_dssp             CHHHHHHSCCGGGGSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             HHHHHHcCCCCchhcCccCCHHHHHHHHHHccCCHhHCcCHHHHHHHHHHH
Confidence                            12223566788899999999999999999887654

>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*

Probab=99.95  E-value=2.2e-29  Score=238.66  Aligned_cols=178  Identities=18%  Similarity=0.174  Sum_probs=130.1

Q ss_pred             CCCccccccCcCCC----CCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcC-----CCCceeecc
Q 045577          185 SGGCKRNWEADCGD----GEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPED-----SRLEIIHRD  255 (392)
Q Consensus       185 s~GCvR~~~l~C~~----~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~-----~~~~iiHrD  255 (392)
                      |++.++.......+    ...|+|||||++|+|.....+.  ...+..+.+++.|+++||.|||++     +.++|+|||
T Consensus        56 HpNIv~l~g~~~~~~~~~~~~~lV~Ey~~~gsL~~~l~~~--~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRD  133 (303)
T 3hmm_A           56 HENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRY--TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRD  133 (303)
T ss_dssp             CTTBCCEEEEEEEECSSSEEEEEEEECCTTCBHHHHHHHC--CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSC
T ss_pred             CCCCCcEEEEEEecCCCceEEEEEecCCCCCcHHHHHHhC--CCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeecc
Confidence            66666655443211    2479999999999998866543  244555789999999999999986     245899999


Q ss_pred             cccceeEEcCCCCCeEeeeeceEEeCCCCcc---eeceeeecccccCchhHH------------HHHHHhcCCCcc-eee
Q 045577          256 HKTSNVLLDAEINPNISDFGPARIFGDQTEE---VTGRVIGTQTLKTVPELL------------QAWKLWSEGDPM-EII  319 (392)
Q Consensus       256 lKp~NIll~~~~~~kl~DFGla~~~~~~~~~---~~~~~~gt~~y~a~~~~~------------~~~diws~G~v~-~~l  319 (392)
                      |||+|||++.++.+||+|||+++........   ......||+.||| ||+.            .+.|+||+|+++ |++
T Consensus       134 lKp~NILl~~~~~~Ki~DFGla~~~~~~~~~~~~~~~~~~GT~~ymA-PE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~  212 (303)
T 3hmm_A          134 LKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMA-PEVLDDSINMKHFESFKRADIYAMGLVFWEIA  212 (303)
T ss_dssp             CCGGGEEECTTSCEEECCCTTCEEEETTTTEESCC-----CCGGGCC-HHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCcccEEECCCCCEEEEeCCCCccccCCCCceeeecccccccccccC-HHHhcccccccCCccChhHhhhhHHHHHHHHH
Confidence            9999999999999999999999987533221   2234689999999 7754            478999999977 454


Q ss_pred             cccccC--------------------------------CCCC-----CHHHHHHHHHHHHhhcccCcCCCCCHHHHHHHH
Q 045577          320 DEQTKM--------------------------------KGPF-----SADELVKCIEVGLLCVQQRIEDWPTMSSVLTML  362 (392)
Q Consensus       320 d~~~~~--------------------------------~~~~-----~~~~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~L  362 (392)
                      .+.+.+                                .+..     ..+....+.+++.+||+.||++||||.||++.|
T Consensus       213 tg~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~rp~~p~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L  292 (303)
T 3hmm_A          213 RRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTL  292 (303)
T ss_dssp             HTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHH
T ss_pred             HCCCCCCccccccccchhcccccchHHHHHHHHhcccCCCCCCccccchHHHHHHHHHHHHHcccCHhHCcCHHHHHHHH
Confidence            432110                                0111     113445677899999999999999999999999


Q ss_pred             ccC
Q 045577          363 SNE  365 (392)
Q Consensus       363 ~~~  365 (392)
                      +..
T Consensus       293 ~~l  295 (303)
T 3hmm_A          293 SQL  295 (303)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            864

>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*

Probab=99.95  E-value=2.6e-29  Score=242.61  Aligned_cols=177  Identities=21%  Similarity=0.204  Sum_probs=135.8

Q ss_pred             CCCccccccCcCC-CCCeeEEecCccCCCcChhhhhhhc---------------cccchhhhhHHHHHHHhhhhcCcCCC
Q 045577          185 SGGCKRNWEADCG-DGEVFLMFEGIKLPDKSEFTCEFEC---------------SKYSSYVTNILYGIARVILYLPEDSR  248 (392)
Q Consensus       185 s~GCvR~~~l~C~-~~~~~lv~e~~~~~~l~~~~~~~~~---------------~~~~~~~~~i~~~ia~gL~yLH~~~~  248 (392)
                      |++.|+....... ++..|+|||||++|+|.........               ...+..++.++.|||+||.|||++  
T Consensus       127 hpnIV~l~g~~~~~~~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~~--  204 (353)
T 4ase_A          127 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR--  204 (353)
T ss_dssp             CTTBCCEEEEECCTTSCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHHT--
T ss_pred             CCcEEEEEEEEEecCCEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhhC--
Confidence            3677777665333 3468999999999999886543221               124455789999999999999998  


Q ss_pred             CceeecccccceeEEcCCCCCeEeeeeceEEeCC-CCcceeceeeecccccCchhHH------HHHHHhcCCCcc-eeec
Q 045577          249 LEIIHRDHKTSNVLLDAEINPNISDFGPARIFGD-QTEEVTGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIID  320 (392)
Q Consensus       249 ~~iiHrDlKp~NIll~~~~~~kl~DFGla~~~~~-~~~~~~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld  320 (392)
                       +||||||||+|||++.++.+||+|||+|+.+.. ..........||+.||| ||+.      .+.|+||+|+++ |++.
T Consensus       205 -~iiHRDLK~~NILl~~~~~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymA-PE~l~~~~y~~ksDVwS~Gv~l~El~t  282 (353)
T 4ase_A          205 -KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMA-PETIFDRVYTIQSDVWSFGVLLWEIFS  282 (353)
T ss_dssp             -TCCCSCCSGGGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCC-HHHHHHCCCCHHHHHHHHHHHHHHHTT
T ss_pred             -CeecCccCccceeeCCCCCEEECcchhhhhcccCCCceeeccccccccccC-HHHHhcCCCCCcccEeehHHHHHHHHh
Confidence             899999999999999999999999999987653 23334455789999999 7765      478999999987 5665


Q ss_pred             -ccccCCCCCCHHH-----------------HHHHHHHHHhhcccCcCCCCCHHHHHHHHccC
Q 045577          321 -EQTKMKGPFSADE-----------------LVKCIEVGLLCVQQRIEDWPTMSSVLTMLSNE  365 (392)
Q Consensus       321 -~~~~~~~~~~~~~-----------------~~~~~~i~~~Cl~~dp~~RPsm~eVv~~L~~~  365 (392)
                       +..++.+....+.                 ...+.+++..||+.||++|||+.+|++.|+..
T Consensus       283 ~G~~Pf~~~~~~~~~~~~i~~g~~~~~p~~~~~~~~~li~~c~~~dP~~RPt~~eil~~L~~l  345 (353)
T 4ase_A          283 LGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNL  345 (353)
T ss_dssp             TSCCSSTTCCCSHHHHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             CCCCCCCCCCHHHHHHHHHHcCCCCCCCccCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHH
Confidence             4444443222221                 22566788899999999999999999998764

>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*

Probab=99.95  E-value=2e-29  Score=241.95  Aligned_cols=170  Identities=15%  Similarity=0.199  Sum_probs=135.2

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEc
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLD  264 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~  264 (392)
                      |++.++.......++..|+|||||++|++.....+.  ...+..+..++.||+.||.|||++   +|+||||||+|||++
T Consensus       130 HpnIV~l~~~~~~~~~~~ivmEy~~gg~L~~~l~~~--~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~  204 (346)
T 4fih_A          130 HENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHT--RMNEEQIAAVCLAVLQALSVLHAQ---GVIHRDIKSDSILLT  204 (346)
T ss_dssp             CTTBCCEEEEEEETTEEEEEECCCTTEEHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEC
T ss_pred             CCCCCcEEEEEEECCEEEEEEeCCCCCcHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHHEEEC
Confidence            788888777666667899999999999998765432  345666889999999999999998   899999999999999


Q ss_pred             CCCCCeEeeeeceEEeCCCCcceeceeeecccccCchhHH------HHHHHhcCCCcc-eeecccccCCCCCCHHH----
Q 045577          265 AEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIIDEQTKMKGPFSADE----  333 (392)
Q Consensus       265 ~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld~~~~~~~~~~~~~----  333 (392)
                      .++.+||+|||+|+.+.... ......+||+.||| ||+.      .+.|+||.|+++ +++.+.+++.+....+.    
T Consensus       205 ~~g~vKl~DFGla~~~~~~~-~~~~~~~GTp~YmA-PEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i  282 (346)
T 4fih_A          205 HDGRVKLSDFGFCAQVSKEV-PRRKSLVGTPYWMA-PELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMI  282 (346)
T ss_dssp             TTCCEEECCCTTCEECCSSS-CCBCCCCSCGGGCC-HHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHH
T ss_pred             CCCCEEEecCcCceecCCCC-CcccccccCcCcCC-HHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHH
Confidence            99999999999999875332 22344789999999 7766      378999999987 66666655544322221    


Q ss_pred             --------------HHHHHHHHHhhcccCcCCCCCHHHHHHH
Q 045577          334 --------------LVKCIEVGLLCVQQRIEDWPTMSSVLTM  361 (392)
Q Consensus       334 --------------~~~~~~i~~~Cl~~dp~~RPsm~eVv~~  361 (392)
                                    ...+.+++..|++.||++|||+.|+++.
T Consensus       283 ~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~ta~e~l~H  324 (346)
T 4fih_A          283 RDNLPPRLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKH  324 (346)
T ss_dssp             HHSSCCCCSCGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred             HcCCCCCCCccccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence                          1245567889999999999999998763

>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...

Probab=99.95  E-value=1.9e-29  Score=238.68  Aligned_cols=170  Identities=17%  Similarity=0.223  Sum_probs=136.3

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEc
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLD  264 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~  264 (392)
                      |++.++.......++..|+||||+++|+|.....+... ..+..+..++.||+.||.|||++   +|+||||||+|||++
T Consensus        91 HpnIv~l~~~~~~~~~~yivmEy~~gG~L~~~i~~~~~-l~e~~~~~~~~qi~~al~ylH~~---~IiHRDlKPeNILl~  166 (311)
T 4aw0_A           91 HPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS-FDETCTRFYTAEIVSALEYLHGK---GIIHRDLKPENILLN  166 (311)
T ss_dssp             CTTBCCEEEEEECSSEEEEEECCCTTEEHHHHHHHHSS-CCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEC
T ss_pred             CCCCCeEEEEEEeCCEEEEEEecCCCCCHHHHHHHcCC-CCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCHHHeEEc
Confidence            88888887777667789999999999999887665444 34555788999999999999998   899999999999999


Q ss_pred             CCCCCeEeeeeceEEeCC-CCcceeceeeecccccCchhHH------HHHHHhcCCCcc-eeecccccCCCCCCHHHH--
Q 045577          265 AEINPNISDFGPARIFGD-QTEEVTGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIIDEQTKMKGPFSADEL--  334 (392)
Q Consensus       265 ~~~~~kl~DFGla~~~~~-~~~~~~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld~~~~~~~~~~~~~~--  334 (392)
                      .++.+||+|||+|+.+.. .........+||+.||| ||+.      .+.|+||.|+++ +++.+.+++.+....+..  
T Consensus       167 ~~g~vKl~DFGla~~~~~~~~~~~~~~~~GTp~YmA-PEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~  245 (311)
T 4aw0_A          167 EDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVS-PELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEGLIFAK  245 (311)
T ss_dssp             TTSCEEECCCTTCEECCTTTTCCCBCCCCSCGGGCC-HHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHH
T ss_pred             CCCCEEEEEcCCceecCCCCCcccccCcccCcccCC-HHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHH
Confidence            999999999999998763 23334455789999999 7776      378999999987 566666665543322222  


Q ss_pred             -------------HHHHHHHHhhcccCcCCCCCHHHHH
Q 045577          335 -------------VKCIEVGLLCVQQRIEDWPTMSSVL  359 (392)
Q Consensus       335 -------------~~~~~i~~~Cl~~dp~~RPsm~eVv  359 (392)
                                   ..+.+++..|++.||++|||+.|+.
T Consensus       246 i~~~~~~~p~~~s~~~~dli~~lL~~dp~~R~t~~e~~  283 (311)
T 4aw0_A          246 IIKLEYDFPEKFFPKARDLVEKLLVLDATKRLGCEEME  283 (311)
T ss_dssp             HHHTCCCCCTTCCHHHHHHHHHHSCSSGGGSTTSGGGT
T ss_pred             HHcCCCCCCcccCHHHHHHHHHHccCCHhHCcChHHHc
Confidence                         2455688899999999999998863

>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*

Probab=99.95  E-value=1.2e-29  Score=243.81  Aligned_cols=171  Identities=17%  Similarity=0.236  Sum_probs=135.6

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhccc-cchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEE
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSK-YSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLL  263 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~~-~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll  263 (392)
                      |++.++.......++..|+|||||++|+|........... .+..+..|+.||+.||.|||++   +|+||||||+|||+
T Consensus        82 HpnIV~~~~~~~~~~~~yiVmEy~~gg~L~~~i~~~~~~~~~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl  158 (350)
T 4b9d_A           82 HPNIVQYRESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDR---KILHRDIKSQNIFL  158 (350)
T ss_dssp             CTTBCCEEEEEEETTEEEEEEECCTTCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHT---TCEETTCCGGGEEE
T ss_pred             CCCCCcEEEEEEECCEEEEEEeCCCCCcHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCCHHHEEE
Confidence            8888888877666778999999999999988765544333 4556788999999999999998   89999999999999


Q ss_pred             cCCCCCeEeeeeceEEeCCCCcceeceeeecccccCchhHH------HHHHHhcCCCcc-eeecccccCCCCCCHHH---
Q 045577          264 DAEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIIDEQTKMKGPFSADE---  333 (392)
Q Consensus       264 ~~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld~~~~~~~~~~~~~---  333 (392)
                      +.++.+||+|||+|+.+... .......+||+.||| ||+.      .+.|+||+|+++ +++.+++++.+....+.   
T Consensus       159 ~~~g~vKl~DFGla~~~~~~-~~~~~~~~GT~~YmA-PE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~~  236 (350)
T 4b9d_A          159 TKDGTVQLGDFGIARVLNST-VELARACIGTPYYLS-PEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMKNLVLK  236 (350)
T ss_dssp             CTTCCEEECSTTEESCCCHH-HHHHHHHHSCCTTCC-HHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHH
T ss_pred             CCCCCEEEcccccceeecCC-cccccccCCCccccC-HHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHH
Confidence            99999999999999875421 122334689999999 7766      488999999987 56666555544322222   


Q ss_pred             -------------HHHHHHHHHhhcccCcCCCCCHHHHHH
Q 045577          334 -------------LVKCIEVGLLCVQQRIEDWPTMSSVLT  360 (392)
Q Consensus       334 -------------~~~~~~i~~~Cl~~dp~~RPsm~eVv~  360 (392)
                                   ...+.+++..|++.||++|||+.|+++
T Consensus       237 i~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~  276 (350)
T 4b9d_A          237 IISGSFPPVSLHYSYDLRSLVSQLFKRNPRDRPSVNSILE  276 (350)
T ss_dssp             HHHTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             HHcCCCCCCCccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence                         224566888999999999999999975

>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}

Probab=99.95  E-value=8.1e-29  Score=243.49  Aligned_cols=170  Identities=15%  Similarity=0.208  Sum_probs=136.2

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEc
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLD  264 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~  264 (392)
                      |++.++.......++..|+|||||++|+|.......  ...+..+..|+.||+.||.|||++   +|+||||||+|||++
T Consensus       207 HpnIV~l~~~~~~~~~~~iVmEy~~gG~L~~~i~~~--~l~e~~~~~~~~qil~aL~ylH~~---~IiHRDiKp~NILl~  281 (423)
T 4fie_A          207 HENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHT--RMNEEQIAAVCLAVLQALSVLHAQ---GVIHRDIKSDSILLT  281 (423)
T ss_dssp             CTTBCCEEEEEEETTEEEEEEECCTTEEHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSTTTEEEC
T ss_pred             CCCCCceEEEEEECCEEEEEEeCCCCCcHHHHHhcc--CCCHHHHHHHHHHHHHHHHHHHHC---CeecccCCHHHEEEc
Confidence            899999888776678899999999999998755332  245556889999999999999998   899999999999999


Q ss_pred             CCCCCeEeeeeceEEeCCCCcceeceeeecccccCchhHH------HHHHHhcCCCcc-eeecccccCCCCCCHHHH---
Q 045577          265 AEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIIDEQTKMKGPFSADEL---  334 (392)
Q Consensus       265 ~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld~~~~~~~~~~~~~~---  334 (392)
                      .++.+||+|||+|+.+.... ......+||+.||| ||+.      .+.|+|++|+++ +++.+.+++.+....+.+   
T Consensus       282 ~~g~vKl~DFGla~~~~~~~-~~~~~~~GTp~YmA-PEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i  359 (423)
T 4fie_A          282 HDGRVKLSDFGFCAQVSKEV-PRRKSLVGTPYWMA-PELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMI  359 (423)
T ss_dssp             TTCCEEECCCTTCEECCSSC-CCBCCCEECTTTCC-HHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHH
T ss_pred             CCCCEEEecCccceECCCCC-ccccccccCcCcCC-HHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHH
Confidence            99999999999999875332 23345789999999 7766      378999999987 666666555443222211   


Q ss_pred             ---------------HHHHHHHHhhcccCcCCCCCHHHHHHH
Q 045577          335 ---------------VKCIEVGLLCVQQRIEDWPTMSSVLTM  361 (392)
Q Consensus       335 ---------------~~~~~i~~~Cl~~dp~~RPsm~eVv~~  361 (392)
                                     ..+.+++..||+.||++|||+.|+++.
T Consensus       360 ~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~ta~ell~H  401 (423)
T 4fie_A          360 RDNLPPRLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKH  401 (423)
T ss_dssp             HHSCCCCCSCTTSSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred             HcCCCCCCcccccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence                           245567889999999999999998763

>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*

Probab=99.95  E-value=1e-28  Score=233.40  Aligned_cols=170  Identities=19%  Similarity=0.165  Sum_probs=131.7

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEc
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLD  264 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~  264 (392)
                      |++.++.......++..|+|||||++|+|.....+... ..+..+..++.||+.||.|||++   +|+||||||+|||++
T Consensus        85 HpnIv~l~~~~~~~~~~~ivmEy~~gg~L~~~l~~~~~-l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~  160 (304)
T 3ubd_A           85 HPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVM-FTEEDVKFYLAELALALDHLHSL---GIIYRDLKPENILLD  160 (304)
T ss_dssp             CTTEECEEEEEEETTEEEEEECCCTTCEEHHHHHHHCC-CCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEEC
T ss_pred             CCCCCeEEEEEEECCEEEEEEEcCCCCCHHHHHHhcCC-CCHHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHeEEc
Confidence            78888887766666789999999999999887665443 34555888999999999999998   899999999999999


Q ss_pred             CCCCCeEeeeeceEEeCCCCcceeceeeecccccCchhHHH------HHHHhcCCCcc-eeecccccCCCCCCHHHH---
Q 045577          265 AEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELLQ------AWKLWSEGDPM-EIIDEQTKMKGPFSADEL---  334 (392)
Q Consensus       265 ~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~~------~~diws~G~v~-~~ld~~~~~~~~~~~~~~---  334 (392)
                      .++.+||+|||+|+...... ......+||+.||| ||+..      +.|+||.|+++ +++.+.+++.+....+..   
T Consensus       161 ~~g~vKl~DFGla~~~~~~~-~~~~~~~GT~~YmA-PE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~~i  238 (304)
T 3ubd_A          161 EEGHIKLTDFGLSKESIDHE-KKAYSFCGTVEYMA-PEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMI  238 (304)
T ss_dssp             TTSCEEEESSEEEEC------CCCCSCCCCGGGCC-HHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHH
T ss_pred             CCCCEEecccccceeccCCC-ccccccccCcccCC-HHHhccCCCCCCCcccchHHHHHHHHhCCCCCCCcCHHHHHHHH
Confidence            99999999999998654222 22334689999999 77663      78999999987 666666665543322222   


Q ss_pred             ------------HHHHHHHHhhcccCcCCCCC-----HHHHHH
Q 045577          335 ------------VKCIEVGLLCVQQRIEDWPT-----MSSVLT  360 (392)
Q Consensus       335 ------------~~~~~i~~~Cl~~dp~~RPs-----m~eVv~  360 (392)
                                  ..+.+++..|++.||++|||     ++|+++
T Consensus       239 ~~~~~~~p~~~s~~~~~li~~~L~~dP~~R~ta~~~~~~eil~  281 (304)
T 3ubd_A          239 LKAKLGMPQFLSPEAQSLLRMLFKRNPANRLGAGPDGVEEIKR  281 (304)
T ss_dssp             HHCCCCCCTTSCHHHHHHHHHHTCSSGGGSTTCSTTTHHHHHT
T ss_pred             HcCCCCCCCcCCHHHHHHHHHHcccCHHHCCCCCcCCHHHHHc
Confidence                        24556888999999999998     456653

>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}

Probab=99.95  E-value=5.3e-29  Score=234.02  Aligned_cols=170  Identities=18%  Similarity=0.233  Sum_probs=128.4

Q ss_pred             CCCccccccCcC---C-CCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccce
Q 045577          185 SGGCKRNWEADC---G-DGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSN  260 (392)
Q Consensus       185 s~GCvR~~~l~C---~-~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~N  260 (392)
                      |++.|+......   . ++..|+|||||++|+|.....+... ..+..+..++.||+.||.|||++. ++|+||||||+|
T Consensus        84 HpnIV~~~~~~~~~~~~~~~~~lvmEy~~gg~L~~~l~~~~~-l~~~~~~~~~~qi~~aL~ylH~~~-~~IiHRDlKp~N  161 (290)
T 3fpq_A           84 HPNIVRFYDSWESTVKGKKCIVLVTELMTSGTLKTYLKRFKV-MKIKVLRSWCRQILKGLQFLHTRT-PPIIHRDLKCDN  161 (290)
T ss_dssp             CTTBCCEEEEEEEEETTEEEEEEEEECCCSCBHHHHHHHHSS-CCHHHHHHHHHHHHHHHHHHHTSS-SCCCCCCCCGGG
T ss_pred             CCCCCcEEEEEeeccCCCcEEEEEEeCCCCCCHHHHHHhcCC-CCHHHHHHHHHHHHHHHHHHHHCC-CCEEecccChhh
Confidence            777777765431   1 2347999999999999887655433 345557889999999999999971 139999999999


Q ss_pred             eEEcC-CCCCeEeeeeceEEeCCCCcceeceeeecccccCchhHH-----HHHHHhcCCCcc-eeecccccCCCCCCHHH
Q 045577          261 VLLDA-EINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELL-----QAWKLWSEGDPM-EIIDEQTKMKGPFSADE  333 (392)
Q Consensus       261 Ill~~-~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~-----~~~diws~G~v~-~~ld~~~~~~~~~~~~~  333 (392)
                      ||++. ++.+||+|||+|+....   ......+||+.||| ||+.     .+.|+||.|+++ +++.+++++.+..+..+
T Consensus       162 ILl~~~~g~vKl~DFGla~~~~~---~~~~~~~GTp~YmA-PE~~~~~y~~~~DiwSlGvilyelltg~~Pf~~~~~~~~  237 (290)
T 3fpq_A          162 IFITGPTGSVKIGDLGLATLKRA---SFAKAVIGTPEFMA-PEMYEEKYDESVDVYAFGMCMLEMATSEYPYSECQNAAQ  237 (290)
T ss_dssp             EEESSTTSCEEECCTTGGGGCCT---TSBEESCSSCCCCC-GGGGGTCCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHH
T ss_pred             eeEECCCCCEEEEeCcCCEeCCC---CccCCcccCccccC-HHHcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcHHH
Confidence            99974 78999999999975322   23345689999999 7765     478999999876 66676555544332222


Q ss_pred             H------------------HHHHHHHHhhcccCcCCCCCHHHHHH
Q 045577          334 L------------------VKCIEVGLLCVQQRIEDWPTMSSVLT  360 (392)
Q Consensus       334 ~------------------~~~~~i~~~Cl~~dp~~RPsm~eVv~  360 (392)
                      +                  ..+.+++..|++.||++|||+.|+++
T Consensus       238 ~~~~i~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~  282 (290)
T 3fpq_A          238 IYRRVTSGVKPASFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLN  282 (290)
T ss_dssp             HHHHHTTTCCCGGGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             HHHHHHcCCCCCCCCccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence            1                  24667888999999999999999875

>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A

Probab=99.95  E-value=1.1e-28  Score=230.09  Aligned_cols=168  Identities=15%  Similarity=0.217  Sum_probs=123.8

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEc
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLD  264 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~  264 (392)
                      |++.++.......++..|+||||+. |++.....+... ..+..+..++.||+.||.|||++   +|+||||||+|||++
T Consensus        72 HpnIv~~~~~~~~~~~~~ivmEy~~-g~L~~~l~~~~~-l~e~~~~~~~~qi~~al~ylH~~---~IiHRDiKP~NILl~  146 (275)
T 3hyh_A           72 HPHIIKLYDVIKSKDEIIMVIEYAG-NELFDYIVQRDK-MSEQEARRFFQQIISAVEYCHRH---KIVHRDLKPENLLLD  146 (275)
T ss_dssp             CTTBCCEEEEEECSSEEEEEEECCC-EEHHHHHHHSCS-CCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCTTTEEEC
T ss_pred             CCCCCeEEEEEEECCEEEEEEeCCC-CCHHHHHHHcCC-CCHHHHHHHHHHHHHHHHHHHHC---CcccccCChHHeEEC
Confidence            8899988877666778999999995 677665554433 35555889999999999999998   899999999999999


Q ss_pred             CCCCCeEeeeeceEEeCCCCcceeceeeecccccCchhHH-------HHHHHhcCCCcc-eeecccccCCCCCCHHH---
Q 045577          265 AEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELL-------QAWKLWSEGDPM-EIIDEQTKMKGPFSADE---  333 (392)
Q Consensus       265 ~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~-------~~~diws~G~v~-~~ld~~~~~~~~~~~~~---  333 (392)
                      .++.+||+|||+|+......  .....+||+.||| ||+.       .+.|+||.|+++ +++.++.++.+....+.   
T Consensus       147 ~~~~vkl~DFGla~~~~~~~--~~~~~~GT~~Y~A-PE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~~~~~~~~~  223 (275)
T 3hyh_A          147 EHLNVKIADFGLSNIMTDGN--FLKTSCGSPNYAA-PEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKN  223 (275)
T ss_dssp             TTCCEEECCSSCC-----------------CTTSC-HHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHH
T ss_pred             CCCCEEEeecCCCeecCCCC--ccCCeeECcccCC-hhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCCCHHHHHHH
Confidence            99999999999998764322  2334689999999 7765       378999999987 56666555544322111   


Q ss_pred             ------------HHHHHHHHHhhcccCcCCCCCHHHHHH
Q 045577          334 ------------LVKCIEVGLLCVQQRIEDWPTMSSVLT  360 (392)
Q Consensus       334 ------------~~~~~~i~~~Cl~~dp~~RPsm~eVv~  360 (392)
                                  ...+.+++.+|++.||++|||+.|+++
T Consensus       224 i~~~~~~~p~~~s~~~~~li~~~L~~dP~~R~s~~eil~  262 (275)
T 3hyh_A          224 ISNGVYTLPKFLSPGAAGLIKRMLIVNPLNRISIHEIMQ  262 (275)
T ss_dssp             HHHTCCCCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred             HHcCCCCCCCCCCHHHHHHHHHHccCChhHCcCHHHHHc
Confidence                        124566888999999999999999986

>3m7h_A Putidacin L1; monocot mannose-binding lectin, bacteriocin, LLPA, pseudomon bacterial toxin, siras, antimicrobial protein; 2.20A {Pseudomonas SP} PDB: 3m7j_A*

Probab=99.93  E-value=3.1e-26  Score=213.06  Aligned_cols=136  Identities=21%  Similarity=0.257  Sum_probs=100.7

Q ss_pred             CCCcEEecCCCeEEeeecCCCCCCceEEEEEEeCCCCceEEEecCCCCccc---------cccCCCCC---------ceE
Q 045577           29 EVRDILLAPSTLWGGNSLIPGNSSQSFLVISYKNLPPLVIWVANRNGSINS---------NLSQDNDL---------GII   90 (392)
Q Consensus        29 ~~~~~l~s~~~~f~~gf~~~~~~~~~~~~i~~~~~~~~~vW~anr~~p~~~---------~~~~~~~~---------~~~   90 (392)
                      ..+++|+|++|.|++|||.++   ++|+   |+  +..|||+|||++|+.+         .|+.+|+|         ++|
T Consensus        24 ~~~~~l~S~~g~F~lgf~~~~---~~~l---y~--~~~vvW~Anr~~p~~~~~~~~~~~l~l~~~G~Lvl~~~~~~~~~v   95 (276)
T 3m7h_A           24 SAGQYLLSPNQRFKLLLQGDG---NLVI---QD--NGATVWVANEQQPFSSTIPLRNKKAPLAFYVQYGAFLDDYSRRRV   95 (276)
T ss_dssp             CTTCEEECTTSSEEEEECTTS---CEEE---EE--TTEEEEECSTTSTTEEEEECCCTTCCSEEEESSSEEEEEGGGTEE
T ss_pred             cCCCEEEcCCCcEEEEEECCC---CeEE---EC--CCCeEEECCCCCCcCCcccccceEEEEeCCCcEEEEEeCCCCCEE
Confidence            557999999999999999432   6676   76  4359999999999843         35567776         469


Q ss_pred             EEecCCCC-----CCCceEEEecCCCeEEEeccCCCCCceEEeeecCCCCccCCCCccccccccCCc------ccceecc
Q 045577           91 WNVILPRA-----TGSPALQLLVAGNLVLREFSLSHSEGYLWESFDSPSDTILPGMKRGMNLRTGWN------QNIKAWN  159 (392)
Q Consensus        91 w~~~~~~~-----~~~~~~~l~d~Gnlvl~~~~~~~~~~~~Wqsfd~ptdt~l~~~~~~~~~~tg~~------~~l~s~k  159 (392)
                      |++++...     .+.+.|+|+|+|||||++      +.++|||  |||||+|||||+|.++.+|..      .....++
T Consensus        96 Wst~~~~~~~~~~~~~~~a~L~d~GNlVl~~------~~~lWqS--~ptdtlLpg~~~~~~l~~g~~L~S~~dps~G~fs  167 (276)
T 3m7h_A           96 WLTDNSTFTSNDQWNRTHLVLQDDGNIVLVD------SLALWNG--TPAIPLVPGAIDSLLLAPGSELVQGVVYGAGASK  167 (276)
T ss_dssp             EEECCCCCCCTTHHHHEEEEECTTSCEEEEE------EEEEEES--CTTSCCCCSCTTCEEECSSEEECTTCEEEETTEE
T ss_pred             EEeCCCcccccccCCceEEEEeCCCCEEecC------CceeeCc--ccccccccccccccccccCcccccCCCCCCceEE
Confidence            99997432     234689999999999986      4689999  999999999998888776633      1122333


Q ss_pred             cCCCCCceEEEEeC-CcceEee
Q 045577          160 LEKSDTPQLVLWRR-TEKVFRS  180 (392)
Q Consensus       160 ld~~g~~~l~~~~~-~~~~w~~  180 (392)
                      +..+...++++|.+ ...||++
T Consensus       168 l~l~~dGnlvLy~~~~~~yW~S  189 (276)
T 3m7h_A          168 LVFQGDGNLVAYGPNGAATWNA  189 (276)
T ss_dssp             EEECTTSCEEEECTTSSEEEEC
T ss_pred             EeecCCceEEEEeCCCeEEEEC
Confidence            33333335677765 4789996

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*

Probab=99.93  E-value=2.8e-27  Score=223.64  Aligned_cols=154  Identities=16%  Similarity=0.234  Sum_probs=109.1

Q ss_pred             CeeEEecCccCCCcChhhhhhhccc--cchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEcCCCCCeEeeeece
Q 045577          200 EVFLMFEGIKLPDKSEFTCEFECSK--YSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEINPNISDFGPA  277 (392)
Q Consensus       200 ~~~lv~e~~~~~~l~~~~~~~~~~~--~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~~~~~~kl~DFGla  277 (392)
                      ..|++|||++++++...........  .+..++.|+.||+.||.|||++   +|+||||||+|||++.++.+||+|||+|
T Consensus        89 ~l~ivmE~~~gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~~al~ylH~~---~IiHRDlKp~NILl~~~~~vKl~DFGla  165 (299)
T 4g31_A           89 YLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHSK---GLMHRDLKPSNIFFTMDDVVKVGDFGLV  165 (299)
T ss_dssp             EEEEEEECCCSCCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECCCCCC
T ss_pred             EEEEEEecCCCCcHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHHHC---cCccccCcHHHeEECCCCcEEEccCccc
Confidence            4799999999999987654433222  2233678999999999999998   8999999999999999999999999999


Q ss_pred             EEeCCCCc-----------ceeceeeecccccCchhHH------HHHHHhcCCCcc-eeecccccCCC------------
Q 045577          278 RIFGDQTE-----------EVTGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIIDEQTKMKG------------  327 (392)
Q Consensus       278 ~~~~~~~~-----------~~~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld~~~~~~~------------  327 (392)
                      +.+.....           ......+||+.||| ||+.      .+.|+||.|+++ +++.+   +..            
T Consensus       166 ~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmA-PE~~~~~~y~~~~DiwSlGvilyell~P---f~~~~~~~~~~~~~~  241 (299)
T 4g31_A          166 TAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMS-PEQIHGNSYSHKVDIFSLGLILFELLYP---FSTQMERVRTLTDVR  241 (299)
T ss_dssp             --------------------------CCCTTSC-HHHHTTCCCCTHHHHHHHHHHHHHHHSC---CSSHHHHHHHHHHHH
T ss_pred             eecCCCccccccccccccccccCCcccCccccC-HHHHcCCCCCCHHHHHHHHHHHHHHccC---CCCccHHHHHHHHHh
Confidence            87652211           11223579999999 7765      478999999987 44321   111            


Q ss_pred             --CCCH---HHHHHHHHHHHhhcccCcCCCCCHHHHHH
Q 045577          328 --PFSA---DELVKCIEVGLLCVQQRIEDWPTMSSVLT  360 (392)
Q Consensus       328 --~~~~---~~~~~~~~i~~~Cl~~dp~~RPsm~eVv~  360 (392)
                        ..++   +......+++.+|++.||++|||+.|+++
T Consensus       242 ~~~~p~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~  279 (299)
T 4g31_A          242 NLKFPPLFTQKYPCEYVMVQDMLSPSPMERPEAINIIE  279 (299)
T ss_dssp             TTCCCHHHHHHCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             cCCCCCCCcccCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence              1111   11123456788999999999999999987

>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}

Probab=99.92  E-value=2.9e-26  Score=224.88  Aligned_cols=171  Identities=20%  Similarity=0.263  Sum_probs=127.8

Q ss_pred             CCCccccccCc------CCCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeeccccc
Q 045577          185 SGGCKRNWEAD------CGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKT  258 (392)
Q Consensus       185 s~GCvR~~~l~------C~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp  258 (392)
                      |++.++.....      ...+..|+|||||+ |++.....+... ..+..+..++.||+.||.|||++   +|+||||||
T Consensus       112 HpnIv~l~~~~~~~~~~~~~~~~~ivmE~~~-g~L~~~i~~~~~-l~~~~~~~~~~qil~al~ylH~~---~iiHRDlKP  186 (398)
T 4b99_A          112 HDNIIAIKDILRPTVPYGEFKSVYVVLDLME-SDLHQIIHSSQP-LTLEHVRYFLYQLLRGLKYMHSA---QVIHRDLKP  186 (398)
T ss_dssp             CTTBCCEEEECCCSSCTTTCCCEEEEEECCS-EEHHHHHTSSSC-CCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCG
T ss_pred             CCCcceEeeeeecccccccCCEEEEEEeCCC-CCHHHHHHhcCC-CCHHHHHHHHHHHHHHHHHHHHC---cCcCCCcCc
Confidence            66666654432      12467899999997 556655544333 34555889999999999999998   899999999


Q ss_pred             ceeEEcCCCCCeEeeeeceEEeCCC---CcceeceeeecccccCchhHH-------HHHHHhcCCCcc-eeecccccCCC
Q 045577          259 SNVLLDAEINPNISDFGPARIFGDQ---TEEVTGRVIGTQTLKTVPELL-------QAWKLWSEGDPM-EIIDEQTKMKG  327 (392)
Q Consensus       259 ~NIll~~~~~~kl~DFGla~~~~~~---~~~~~~~~~gt~~y~a~~~~~-------~~~diws~G~v~-~~ld~~~~~~~  327 (392)
                      +|||++.++.+||+|||+|+.+...   ........+||+.||| ||+.       .+.|+||.|+++ +++.+.+.+.+
T Consensus       187 ~NIl~~~~~~~Ki~DFGla~~~~~~~~~~~~~~~~~~GT~~Y~A-PEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g  265 (398)
T 4b99_A          187 SNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRA-PELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPG  265 (398)
T ss_dssp             GGEEECTTCCEEECCCTTCBCC-------CCCCCSSCCCCTTCC-HHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCC
T ss_pred             cccccCCCCCEEEeecceeeecccCccccccccccceeChHhcC-HHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCC
Confidence            9999999999999999999865421   1223344789999999 7764       378999999987 67777666655


Q ss_pred             CCCHHHHH----------------------------------------------HHHHHHHhhcccCcCCCCCHHHHHHH
Q 045577          328 PFSADELV----------------------------------------------KCIEVGLLCVQQRIEDWPTMSSVLTM  361 (392)
Q Consensus       328 ~~~~~~~~----------------------------------------------~~~~i~~~Cl~~dp~~RPsm~eVv~~  361 (392)
                      ....+.+.                                              .+.+++..|++.||++|||+.|+++.
T Consensus       266 ~~~~~~l~~I~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~H  345 (398)
T 4b99_A          266 KNYVHQLQLIMMVLGTPSPAVIQAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALRH  345 (398)
T ss_dssp             SSHHHHHHHHHHHHCCCCGGGTC-----CHHHHHHSSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSTTTSCCHHHHTTS
T ss_pred             CCHHHHHHHHHHhcCCCChHHhhhhhhhhhhhhhhcCCCcCCCCHHHhCCCCCHHHHHHHHHHCcCChhHCcCHHHHhcC
Confidence            43333222                                              34567889999999999999998863

>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*

Probab=99.92  E-value=8.2e-26  Score=219.13  Aligned_cols=134  Identities=19%  Similarity=0.216  Sum_probs=103.3

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEc
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLD  264 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~  264 (392)
                      |+++++.......++..|+||||++++++.....    ......+..++.|++.||.|||++   +|+||||||+|||++
T Consensus        79 h~nIv~l~~~~~~~~~~~lvmE~~~g~~L~~~~~----~l~~~~~~~~~~qll~al~ylH~~---gIiHRDiKPeNiLl~  151 (361)
T 4f9c_A           79 QDNVMGVKYCFRKNDHVVIAMPYLEHESFLDILN----SLSFQEVREYMLNLFKALKRIHQF---GIVHRDVKPSNFLYN  151 (361)
T ss_dssp             BTTBCCCSEEEEETTEEEEEEECCCCCCHHHHHT----TCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEE
T ss_pred             CCCCceEEEEEEECCEEEEEEeCCCcccHHHHHc----CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCcCCHHHeEEe
Confidence            6777777666555678999999999999876542    134455788999999999999998   999999999999998


Q ss_pred             CC-CCCeEeeeeceEEeCCCCc---------------------------ceeceeeecccccCchhHH-------HHHHH
Q 045577          265 AE-INPNISDFGPARIFGDQTE---------------------------EVTGRVIGTQTLKTVPELL-------QAWKL  309 (392)
Q Consensus       265 ~~-~~~kl~DFGla~~~~~~~~---------------------------~~~~~~~gt~~y~a~~~~~-------~~~di  309 (392)
                      .+ +.+||+|||+|+.......                           ......+||+.||| ||+.       .+.|+
T Consensus       152 ~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~A-PE~l~~~~~y~~~~Di  230 (361)
T 4f9c_A          152 RRLKKYALVDFGLAQGTHDTKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRA-PEVLTKCPNQTTAIDM  230 (361)
T ss_dssp             TTTTEEEECCCTTCEECTTCSCGGGGGC--------------------------CCCCGGGCC-HHHHTTCSCCCTHHHH
T ss_pred             CCCCeEEECcCCCCcccCCccccccccccccccccccccccccccccccccccccccCccccC-HHHHcCCCCCCCccch
Confidence            76 7899999999987542110                           11223579999999 7765       37799


Q ss_pred             hcCCCcc-eeecccccCC
Q 045577          310 WSEGDPM-EIIDEQTKMK  326 (392)
Q Consensus       310 ws~G~v~-~~ld~~~~~~  326 (392)
                      ||.|+++ +++.++.++.
T Consensus       231 WSlG~il~ell~G~~Pf~  248 (361)
T 4f9c_A          231 WSAGVIFLSLLSGRYPFY  248 (361)
T ss_dssp             HHHHHHHHHHHHTCSSSS
T ss_pred             hhhHHHHHHHHHCCCCCC
Confidence            9999987 6677655554

>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A

Probab=99.91  E-value=1.2e-25  Score=231.12  Aligned_cols=168  Identities=15%  Similarity=0.077  Sum_probs=132.1

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEc
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLD  264 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~  264 (392)
                      |++.++........+..|+|||||++|+|.....+... ..+..+..++.||+.||.|||++   +|+||||||+|||++
T Consensus       251 HP~IV~l~~~f~~~~~lylVmEy~~GGdL~~~l~~~~~-l~E~~a~~y~~qIl~aL~yLH~~---gIiHRDLKPeNILld  326 (689)
T 3v5w_A          251 CPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGV-FSEADMRFYAAEIILGLEHMHNR---FVVYRDLKPANILLD  326 (689)
T ss_dssp             CTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHHHCC-CCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEEC
T ss_pred             CCCEeEEEEEEEECCEEEEEEecCCCCcHHHHHHhcCC-CCHHHHHHHHHHHHHHHHHHHHC---CccccCCchHHeEEe
Confidence            67777776665556789999999999999887765443 34555888999999999999998   899999999999999


Q ss_pred             CCCCCeEeeeeceEEeCCCCcceeceeeecccccCchhHH-------HHHHHhcCCCcc-eeecccccCCCCC--CHHH-
Q 045577          265 AEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELL-------QAWKLWSEGDPM-EIIDEQTKMKGPF--SADE-  333 (392)
Q Consensus       265 ~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~-------~~~diws~G~v~-~~ld~~~~~~~~~--~~~~-  333 (392)
                      .++.+||+|||+|+.+...   .....+||+.||| ||++       .++|+|+.|+++ +++.+.+++.+..  ...+ 
T Consensus       327 ~~G~vKL~DFGlA~~~~~~---~~~t~~GTp~YmA-PEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~~~~~i  402 (689)
T 3v5w_A          327 EHGHVRISDLGLACDFSKK---KPHASVGTHGYMA-PEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEI  402 (689)
T ss_dssp             TTSCEEECCCTTCEECSSC---CCCSCCSCGGGCC-HHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCCCHHHH
T ss_pred             CCCCEEecccceeeecCCC---CCCCccCCcCccC-HHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHH
Confidence            9999999999999987532   2334689999999 7766       268999999987 6777766664321  1111 


Q ss_pred             ---------------HHHHHHHHHhhcccCcCCCCC-----HHHHHH
Q 045577          334 ---------------LVKCIEVGLLCVQQRIEDWPT-----MSSVLT  360 (392)
Q Consensus       334 ---------------~~~~~~i~~~Cl~~dp~~RPs-----m~eVv~  360 (392)
                                     ...+.+++..|++.||.+|++     +.+|.+
T Consensus       403 ~~~i~~~~~~~p~~~S~~a~dLI~~lL~~dP~~Rl~~~~~ga~ei~~  449 (689)
T 3v5w_A          403 DRMTLTMAVELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKE  449 (689)
T ss_dssp             HHHHHHCCCCCCTTSCHHHHHHHHHHTCSCGGGCTTCSSSTHHHHTT
T ss_pred             HHhhcCCCCCCCccCCHHHHHHHHHHccCCHhHCCCCCCCCHHHHhc
Confidence                           124567888999999999998     577664

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A

Probab=99.91  E-value=6.1e-25  Score=225.34  Aligned_cols=170  Identities=14%  Similarity=0.143  Sum_probs=135.0

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEc
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLD  264 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~  264 (392)
                      |++.++.......++..|++||||++|+|.....+......+..+..++.||+.||.|||++   +|+||||||+|||++
T Consensus       213 hpnIv~l~~~~~~~~~~~iv~E~~~gg~L~~~i~~~~~~l~e~~~~~~~~qi~~al~ylH~~---~iiHRDlKp~Nill~  289 (573)
T 3uto_A          213 HPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHEN---NYVHLDLKPENIMFT  289 (573)
T ss_dssp             CTTBCCEEEEEECSSEEEEEEECCCCCBHHHHHTCTTSCEEHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEES
T ss_pred             CCCCCeEEEEEEECCEEEEEEeecCCCcHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCChhhcccc
Confidence            89999988877667889999999999999876654433345566889999999999999998   899999999999998


Q ss_pred             CC--CCCeEeeeeceEEeCCCCcceeceeeecccccCchhHH------HHHHHhcCCCcc-eeecccccCCCCCCHHH--
Q 045577          265 AE--INPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIIDEQTKMKGPFSADE--  333 (392)
Q Consensus       265 ~~--~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld~~~~~~~~~~~~~--  333 (392)
                      .+  +.+||+|||+++.+...  ......+||+.||| ||+.      ...|+||.|+++ +++.+.+++.+....+.  
T Consensus       290 ~~~~~~vKl~DFG~a~~~~~~--~~~~~~~GT~~y~A-PEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~~~~~~~~  366 (573)
T 3uto_A          290 TKRSNELKLIDFGLTAHLDPK--QSVKVTTGTAEFAA-PEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLR  366 (573)
T ss_dssp             SSSCCCEEECCCSSCEECCTT--SEEEEECSSGGGCC-HHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHH
T ss_pred             CCCCCCEEEeeccceeEccCC--CceeeeEECccccC-HHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHH
Confidence            54  78999999999987533  23344689999999 7766      478999999977 56666555443322221  


Q ss_pred             -----------------HHHHHHHHHhhcccCcCCCCCHHHHHH
Q 045577          334 -----------------LVKCIEVGLLCVQQRIEDWPTMSSVLT  360 (392)
Q Consensus       334 -----------------~~~~~~i~~~Cl~~dp~~RPsm~eVv~  360 (392)
                                       ...+.+++..|++.||++||++.|+++
T Consensus       367 ~i~~~~~~~~~~~~~~~s~~~~dli~~~L~~dp~~R~t~~e~l~  410 (573)
T 3uto_A          367 NVKSCDWNMDDSAFSGISEDGKDFIRKLLLADPNTRMTIHQALE  410 (573)
T ss_dssp             HHHTTCCCCCSGGGTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred             HHHhCCCCCCcccccCCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence                             124556788999999999999999987

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*

Probab=99.91  E-value=3.6e-24  Score=203.99  Aligned_cols=180  Identities=28%  Similarity=0.366  Sum_probs=141.2

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhc---cccchhhhhHHHHHHHhhhhcCcCCCCceeeccccccee
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFEC---SKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNV  261 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~---~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NI  261 (392)
                      |++.++........+..+++|||++++++.........   ...+..+..++.|++.||.|||+.+..+|+||||||+||
T Consensus        86 h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Ni  165 (326)
T 3uim_A           86 HRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANI  165 (326)
T ss_dssp             CTTBCCCCEEECCSSCCEEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGE
T ss_pred             CCCccceEEEEecCCceEEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhE
Confidence            56666665554455778999999999998775543221   134555789999999999999998777899999999999


Q ss_pred             EEcCCCCCeEeeeeceEEeCCCCcceeceeeecccccCchhHH------HHHHHhcCCCcc-eeecccccC---------
Q 045577          262 LLDAEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIIDEQTKM---------  325 (392)
Q Consensus       262 ll~~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld~~~~~---------  325 (392)
                      +++.++.+||+|||+++..............||+.|+| ||..      .+.|+|+.|+++ +++.+..++         
T Consensus       166 l~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~a-PE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~  244 (326)
T 3uim_A          166 LLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIA-PEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDD  244 (326)
T ss_dssp             EECTTCCEEECCCSSCEECCSSSSCEECCCCSCGGGCC-HHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBCHHHHTTTS
T ss_pred             EECCCCCEEeccCccccccCcccccccccccCCcCccC-HHHhccCCCCccccchhHHHHHHHHHhCCCccccccccccc
Confidence            99999999999999999876444444455679999999 7765      378999999876 444433222         


Q ss_pred             -------------------------CCCCCHHHHHHHHHHHHhhcccCcCCCCCHHHHHHHHccC
Q 045577          326 -------------------------KGPFSADELVKCIEVGLLCVQQRIEDWPTMSSVLTMLSNE  365 (392)
Q Consensus       326 -------------------------~~~~~~~~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~L~~~  365 (392)
                                               ......+....+.+++..|++.||++|||+.+|+++|++.
T Consensus       245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~~  309 (326)
T 3uim_A          245 DVMLLDWVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGD  309 (326)
T ss_dssp             CSBHHHHHTTTTSSCCSTTSSCTTCTTSCCHHHHHHHHHHHHHHTCSCGGGSCCHHHHHHHHHTS
T ss_pred             chhHHHHHHHHhhchhhhhhcChhhccccCHHHHHHHHHHHHHHhCcCCccCCCHHHHHHHhcCc
Confidence                                     1234566778899999999999999999999999999875

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*

Probab=99.89  E-value=5.3e-24  Score=203.16  Aligned_cols=176  Identities=18%  Similarity=0.202  Sum_probs=131.2

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEc
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLD  264 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~  264 (392)
                      |++.++.... |.++..+++|||+.++++...............+..++.|++.||.|||+.   +|+||||||+||+++
T Consensus        74 h~~iv~~~~~-~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~  149 (325)
T 3kex_A           74 HAHIVRLLGL-CPGSSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLEEH---GMVHRNLAARNVLLK  149 (325)
T ss_dssp             CTTBCCEEEE-ECBSSEEEEEECCTTCBSHHHHHSSGGGSCTTHHHHHHHHHHHHHHHHHHT---TCCCSCCSSTTEEES
T ss_pred             CCCcCeEEEE-EcCCccEEEEEeCCCCCHHHHHHHccccCCHHHHHHHHHHHHHHHHHHHhC---CCCCCccchheEEEC
Confidence            6666666553 346779999999999999876655433445566899999999999999998   899999999999999


Q ss_pred             CCCCCeEeeeeceEEeCCC-CcceeceeeecccccCchhHHH------HHHHhcCCCcc-eeec-ccccCCCCCCHHHHH
Q 045577          265 AEINPNISDFGPARIFGDQ-TEEVTGRVIGTQTLKTVPELLQ------AWKLWSEGDPM-EIID-EQTKMKGPFSADELV  335 (392)
Q Consensus       265 ~~~~~kl~DFGla~~~~~~-~~~~~~~~~gt~~y~a~~~~~~------~~diws~G~v~-~~ld-~~~~~~~~~~~~~~~  335 (392)
                      .++.+||+|||+++..... .........|+..|+| ||...      +.|+|+.|+++ +++. +..++.+....+...
T Consensus       150 ~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~a-PE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~  228 (325)
T 3kex_A          150 SPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMA-LESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAEVPD  228 (325)
T ss_dssp             SSSCEEECSCSGGGGSCCCTTCCC-----CCTTTSC-HHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCTTHHHH
T ss_pred             CCCeEEECCCCcccccCcccccccccCCCCcccccC-hHHhccCCCChhhHhHHhHHHHHHHHhCCCCCccccCHHHHHH
Confidence            9999999999999876522 2223344667889999 77653      78999999976 5566 544443322221111


Q ss_pred             ----------------HHHHHHHhhcccCcCCCCCHHHHHHHHccC
Q 045577          336 ----------------KCIEVGLLCVQQRIEDWPTMSSVLTMLSNE  365 (392)
Q Consensus       336 ----------------~~~~i~~~Cl~~dp~~RPsm~eVv~~L~~~  365 (392)
                                      .+.+++..|++.||++||++.++++.|+..
T Consensus       229 ~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~el~~~l~~~  274 (325)
T 3kex_A          229 LLEKGERLAQPQICTIDVYMVMVKCWMIDENIRPTFKELANEFTRM  274 (325)
T ss_dssp             HHHTTCBCCCCTTBCTTTTHHHHHHTCSCTTTSCCHHHHHHHHHHH
T ss_pred             HHHcCCCCCCCCcCcHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence                            344578899999999999999999999865

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}

Probab=99.89  E-value=6.7e-24  Score=202.68  Aligned_cols=177  Identities=19%  Similarity=0.213  Sum_probs=130.9

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEc
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLD  264 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~  264 (392)
                      |++.++.......++..|+||||++++++...............+..++.|++.||.|||+.   +|+||||||+||+++
T Consensus       109 h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~  185 (325)
T 3kul_A          109 HPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLSDL---GYVHRDLAARNVLVD  185 (325)
T ss_dssp             CTTBCCEEEEECGGGCCEEEEECCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEC
T ss_pred             CCCCCcEEEEEEeCCccEEEeeCCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCcceEEEC
Confidence            55666555544335678999999999999876544433445566889999999999999998   899999999999999


Q ss_pred             CCCCCeEeeeeceEEeCCCC--cceeceeeecccccCchhHHH------HHHHhcCCCcc-eeec-ccccCCCCCC----
Q 045577          265 AEINPNISDFGPARIFGDQT--EEVTGRVIGTQTLKTVPELLQ------AWKLWSEGDPM-EIID-EQTKMKGPFS----  330 (392)
Q Consensus       265 ~~~~~kl~DFGla~~~~~~~--~~~~~~~~gt~~y~a~~~~~~------~~diws~G~v~-~~ld-~~~~~~~~~~----  330 (392)
                      .++.+||+|||+++......  ........+|+.|+| ||...      +.|+|+.|+++ +++. +..++.+...    
T Consensus       186 ~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~t~~y~a-PE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~  264 (325)
T 3kul_A          186 SNLVCKVSDFGLSRVLEDDPDAAYTTTGGKIPIRWTA-PEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVI  264 (325)
T ss_dssp             TTCCEEECCCSSCEECC----CCEECC---CCGGGSC-HHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTSCHHHHH
T ss_pred             CCCCEEECCCCcccccccCccceeeccCCCCcccccC-HhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCcccCCHHHHH
Confidence            99999999999999875321  122223456778999 77653      78999999987 4555 4333322111    


Q ss_pred             ------------HHHHHHHHHHHHhhcccCcCCCCCHHHHHHHHccC
Q 045577          331 ------------ADELVKCIEVGLLCVQQRIEDWPTMSSVLTMLSNE  365 (392)
Q Consensus       331 ------------~~~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~L~~~  365 (392)
                                  ......+.+++..|++.||++||++.+|++.|+..
T Consensus       265 ~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~eil~~L~~l  311 (325)
T 3kul_A          265 SSVEEGYRLPAPMGCPHALHQLMLDCWHKDRAQRPRFSQIVSVLDAL  311 (325)
T ss_dssp             HHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             HHHHcCCCCCCCCCcCHHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence                        11223566788899999999999999999999876

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A

Probab=99.89  E-value=1.5e-23  Score=203.97  Aligned_cols=177  Identities=22%  Similarity=0.203  Sum_probs=133.7

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhc---------------cccchhhhhHHHHHHHhhhhcCcCCCC
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFEC---------------SKYSSYVTNILYGIARVILYLPEDSRL  249 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~---------------~~~~~~~~~i~~~ia~gL~yLH~~~~~  249 (392)
                      |++.++........+..|+||||++++++.........               ......++.++.||++||.|||+.   
T Consensus       146 hpnIv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---  222 (370)
T 2psq_A          146 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---  222 (370)
T ss_dssp             CTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHHT---
T ss_pred             CCCEeeEEEEEccCCCEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---
Confidence            77888777665556789999999999999875544321               123344788999999999999998   


Q ss_pred             ceeecccccceeEEcCCCCCeEeeeeceEEeCCCCc-ceeceeeecccccCchhHH------HHHHHhcCCCcc-eeec-
Q 045577          250 EIIHRDHKTSNVLLDAEINPNISDFGPARIFGDQTE-EVTGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIID-  320 (392)
Q Consensus       250 ~iiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~~-~~~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld-  320 (392)
                      +|+||||||+||+++.++.+||+|||+++....... .......+|+.|+| ||+.      .+.|+|++|+++ +++. 
T Consensus       223 ~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~a-PE~~~~~~~~~~~DvwslG~il~ellt~  301 (370)
T 2psq_A          223 KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMA-PEALFDRVYTHQSDVWSFGVLMWEIFTL  301 (370)
T ss_dssp             TEECSCCCGGGEEECTTCCEEECCCSSCEETTCCCTTCTTTTTTSCGGGCC-HHHHHTCCCCHHHHHHHHHHHHHHHHTT
T ss_pred             CeeccccchhhEEECCCCCEEEccccCCcccCcccceecccCCCcccceEC-HhHhcCCCCCcHHHHHHHHHHHHHHHcC
Confidence            899999999999999999999999999997653221 22223456789999 7755      478999999987 4555 


Q ss_pred             ccccCCCCC----------------CHHHHHHHHHHHHhhcccCcCCCCCHHHHHHHHccC
Q 045577          321 EQTKMKGPF----------------SADELVKCIEVGLLCVQQRIEDWPTMSSVLTMLSNE  365 (392)
Q Consensus       321 ~~~~~~~~~----------------~~~~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~L~~~  365 (392)
                      +...+.+..                +......+.+++..|++.+|++||++.++++.|+..
T Consensus       302 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rpt~~ell~~L~~i  362 (370)
T 2psq_A          302 GGSPYPGIPVEELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI  362 (370)
T ss_dssp             SCCSSTTCCGGGHHHHHHTTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             CCCCCCCCCHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence            433332221                111223566788899999999999999999999864

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*

Probab=99.89  E-value=7.3e-24  Score=201.06  Aligned_cols=178  Identities=17%  Similarity=0.173  Sum_probs=125.3

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhc--cccchhhhhHHHHHHHhhhhcCcCCCCc--eeecccccce
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFEC--SKYSSYVTNILYGIARVILYLPEDSRLE--IIHRDHKTSN  260 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~--~~~~~~~~~i~~~ia~gL~yLH~~~~~~--iiHrDlKp~N  260 (392)
                      |++.++........+..+++|||++++++.....+...  ......+..++.|++.||.|||+.   +  |+||||||+|
T Consensus        93 hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~~~ivH~Dikp~N  169 (309)
T 3p86_A           93 HPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNR---NPPIVHRNLKSPN  169 (309)
T ss_dssp             CTTBCCEEEEECSTTCCEEEEECCTTCBHHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHHHTS---SSCCCCTTCCGGG
T ss_pred             CCCEeeEEEEEEECCceEEEEecCCCCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcC---CCCEECCCCChhh
Confidence            66766666655556779999999999998775543322  134555788999999999999998   7  9999999999


Q ss_pred             eEEcCCCCCeEeeeeceEEeCCCCcceeceeeecccccCchhHH------HHHHHhcCCCcc-eeecccccCCCCCCH--
Q 045577          261 VLLDAEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIIDEQTKMKGPFSA--  331 (392)
Q Consensus       261 Ill~~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld~~~~~~~~~~~--  331 (392)
                      |+++.++.+||+|||+++..... ........||+.|+| ||..      .+.|+|+.|+++ +++.+..++......  
T Consensus       170 Ill~~~~~~kL~Dfg~a~~~~~~-~~~~~~~~gt~~y~a-PE~~~~~~~~~~~DiwslG~il~elltg~~Pf~~~~~~~~  247 (309)
T 3p86_A          170 LLVDKKYTVKVCDFGLSRLKAST-FLSSKSAAGTPEWMA-PEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQV  247 (309)
T ss_dssp             EEECTTCCEEECCCC------------------CCTTSC-HHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTTSCHHHH
T ss_pred             EEEeCCCcEEECCCCCCcccccc-ccccccCCCCccccC-hhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH
Confidence            99999999999999999865422 122334679999999 7765      367999999876 555553333222111  


Q ss_pred             ---------------HHHHHHHHHHHhhcccCcCCCCCHHHHHHHHccCCC
Q 045577          332 ---------------DELVKCIEVGLLCVQQRIEDWPTMSSVLTMLSNESI  367 (392)
Q Consensus       332 ---------------~~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~L~~~~~  367 (392)
                                     .....+.+++..|++.+|++||++.++++.|+....
T Consensus       248 ~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~~L~~~~~  298 (309)
T 3p86_A          248 VAAVGFKCKRLEIPRNLNPQVAAIIEGCWTNEPWKRPSFATIMDLLRPLIK  298 (309)
T ss_dssp             HHHHHHSCCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHC
T ss_pred             HHHHHhcCCCCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHH
Confidence                           112345678889999999999999999999988633

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*

Probab=99.89  E-value=3.2e-23  Score=197.24  Aligned_cols=177  Identities=24%  Similarity=0.289  Sum_probs=135.7

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhc---cccchhhhhHHHHHHHhhhhcCcCCCCceeeccccccee
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFEC---SKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNV  261 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~---~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NI  261 (392)
                      |++.++........+..|++|||++++++.........   ...+..+..++.|++.||.|||+.   +++||||||+||
T Consensus        94 h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~ivH~dlkp~Ni  170 (321)
T 2qkw_B           94 HPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTR---AIIHRDVKSINI  170 (321)
T ss_dssp             CTTBCCEEEECCCTTCCEEEEECCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCSTTE
T ss_pred             CCCEeeEEEEEcCCCeEEEEEEcCCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhcCC---CeecCCCCHHHE
Confidence            66666665554456789999999999998775433221   124455789999999999999998   899999999999


Q ss_pred             EEcCCCCCeEeeeeceEEeCCC-CcceeceeeecccccCchhHH------HHHHHhcCCCcc-eeecccccC--------
Q 045577          262 LLDAEINPNISDFGPARIFGDQ-TEEVTGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIIDEQTKM--------  325 (392)
Q Consensus       262 ll~~~~~~kl~DFGla~~~~~~-~~~~~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld~~~~~--------  325 (392)
                      +++.++.+||+|||+++..... .........||+.|+| ||..      .+.|+|+.|+++ +++.++..+        
T Consensus       171 l~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~a-PE~~~~~~~~~~~Di~slG~il~ell~g~~p~~~~~~~~~  249 (321)
T 2qkw_B          171 LLDENFVPKITDFGISKKGTELDQTHLSTVVKGTLGYID-PEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREM  249 (321)
T ss_dssp             EECTTCCEEECCCTTCEECSSSSCCCCBCCCEEETTTCC-HHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSCSSSSSC
T ss_pred             EECCCCCEEEeecccccccccccccccccccCCCccccC-HHHhcCCCCCcccchHhHHHHHHHHHhCCCcccccCcHHH
Confidence            9999999999999999876522 2222334578999999 7765      378999999876 444332221        


Q ss_pred             ------------------------CCCCCHHHHHHHHHHHHhhcccCcCCCCCHHHHHHHHccC
Q 045577          326 ------------------------KGPFSADELVKCIEVGLLCVQQRIEDWPTMSSVLTMLSNE  365 (392)
Q Consensus       326 ------------------------~~~~~~~~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~L~~~  365 (392)
                                              ......+....+.+++..|++.||++||++.+|++.|+..
T Consensus       250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~  313 (321)
T 2qkw_B          250 VNLAEWAVESHNNGQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYA  313 (321)
T ss_dssp             CCHHHHTHHHHTTTCCCSSSSSSCTTCSCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             HHHHHHhhhccccccHHHhcChhhccccCHHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHH
Confidence                                    1223456677888999999999999999999999999875

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*

Probab=99.88  E-value=2.2e-23  Score=203.18  Aligned_cols=177  Identities=18%  Similarity=0.137  Sum_probs=133.0

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEc
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLD  264 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~  264 (392)
                      |++.++.......++..|+||||++++++...............+..++.|++.||.|||+.   +++||||||+||+++
T Consensus       171 hpniv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nil~~  247 (377)
T 3cbl_A          171 HPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESK---CCIHRDLAARNCLVT  247 (377)
T ss_dssp             CTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEC
T ss_pred             CCCEEEEEEEEecCCCcEEEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CcCCcccCHHHEEEc
Confidence            67777766655555678999999999998876655444445566889999999999999998   899999999999999


Q ss_pred             CCCCCeEeeeeceEEeCCCCcce-eceeeecccccCchhHH------HHHHHhcCCCcc-eeec-ccccCCCCC------
Q 045577          265 AEINPNISDFGPARIFGDQTEEV-TGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIID-EQTKMKGPF------  329 (392)
Q Consensus       265 ~~~~~kl~DFGla~~~~~~~~~~-~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld-~~~~~~~~~------  329 (392)
                      .++.+||+|||+++......... .....++..|+| ||..      .+.|+|+.|+++ +++. +..++.+..      
T Consensus       248 ~~~~~kl~DfG~s~~~~~~~~~~~~~~~~~~~~y~a-PE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~~~~~~~~  326 (377)
T 3cbl_A          248 EKNVLKISDFGMSREEADGVYAASGGLRQVPVKWTA-PEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQTRE  326 (377)
T ss_dssp             TTCCEEECCGGGCEECTTSEEECCSSCCEEEGGGSC-HHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTSCHHHHHH
T ss_pred             CCCcEEECcCCCceecCCCceeecCCCCCCCcCcCC-HhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHH
Confidence            99999999999998754221111 112346778999 7765      378999999987 4554 332322211      


Q ss_pred             ----------CHHHHHHHHHHHHhhcccCcCCCCCHHHHHHHHccC
Q 045577          330 ----------SADELVKCIEVGLLCVQQRIEDWPTMSSVLTMLSNE  365 (392)
Q Consensus       330 ----------~~~~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~L~~~  365 (392)
                                +......+.+++..||+.||++|||+.+|++.|+..
T Consensus       327 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i  372 (377)
T 3cbl_A          327 FVEKGGRLPCPELCPDAVFRLMEQCWAYEPGQRPSFSTIYQELQSI  372 (377)
T ss_dssp             HHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             HHHcCCCCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHH
Confidence                      111223566788899999999999999999999864

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*

Probab=99.88  E-value=4.5e-23  Score=190.79  Aligned_cols=177  Identities=16%  Similarity=0.209  Sum_probs=132.7

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEc
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLD  264 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~  264 (392)
                      |++.++.......++..|++|||++++++...............+..++.|++.||.|||+.   +++||||||+||+++
T Consensus        62 h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nil~~  138 (268)
T 3sxs_A           62 HPKLVKFYGVCSKEYPIYIVTEYISNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFLESH---QFIHRDLAARNCLVD  138 (268)
T ss_dssp             CTTBCCEEEEECSSSSEEEEEECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHT---TEEESSCSGGGEEEC
T ss_pred             CCCEeeEEEEEccCCceEEEEEccCCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCcCcceEEEC
Confidence            45555554444345678999999999988876554433345566889999999999999998   899999999999999


Q ss_pred             CCCCCeEeeeeceEEeCCCCcceeceeeecccccCchhHHH------HHHHhcCCCcc-eeec-ccccCCCCCCHH----
Q 045577          265 AEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELLQ------AWKLWSEGDPM-EIID-EQTKMKGPFSAD----  332 (392)
Q Consensus       265 ~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~~------~~diws~G~v~-~~ld-~~~~~~~~~~~~----  332 (392)
                      .++.+||+|||+++..............+++.|+| ||...      +.|+|+.|+++ +++. +..++......+    
T Consensus       139 ~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~~y~a-PE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~  217 (268)
T 3sxs_A          139 RDLCVKVSDFGMTRYVLDDQYVSSVGTKFPVKWSA-PEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSEVVLK  217 (268)
T ss_dssp             TTCCEEECCTTCEEECCTTCEEECCSCCCCGGGCC-HHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHH
T ss_pred             CCCCEEEccCccceecchhhhhcccCCCcCcccCC-HHHHhccCCchhhhhHHHHHHHHHHHcCCCCCccccChHHHHHH
Confidence            99999999999998875433333333456778999 77654      67999999876 4554 433332211111    


Q ss_pred             ------------HHHHHHHHHHhhcccCcCCCCCHHHHHHHHccC
Q 045577          333 ------------ELVKCIEVGLLCVQQRIEDWPTMSSVLTMLSNE  365 (392)
Q Consensus       333 ------------~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~L~~~  365 (392)
                                  ....+.+++..|++.+|++||++.++++.|+..
T Consensus       218 ~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l  262 (268)
T 3sxs_A          218 VSQGHRLYRPHLASDTIYQIMYSCWHELPEKRPTFQQLLSSIEPL  262 (268)
T ss_dssp             HHTTCCCCCCTTSCHHHHHHHHHTTCSSGGGSCCHHHHHHHHGGG
T ss_pred             HHcCCCCCCCCcChHHHHHHHHHHcCCChhhCcCHHHHHHHHHHh
Confidence                        123466788899999999999999999999886

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*

Probab=99.88  E-value=2.4e-23  Score=195.56  Aligned_cols=161  Identities=19%  Similarity=0.248  Sum_probs=122.2

Q ss_pred             CCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcC--------cCCCCceeecccccceeEEcCCCCCe
Q 045577          199 GEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLP--------EDSRLEIIHRDHKTSNVLLDAEINPN  270 (392)
Q Consensus       199 ~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH--------~~~~~~iiHrDlKp~NIll~~~~~~k  270 (392)
                      +..|++|||++++++......  .......+..++.|++.||.|||        +.   +|+||||||+||+++.++.+|
T Consensus        79 ~~~~lv~e~~~~g~L~~~l~~--~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~---~ivH~Dlkp~Nill~~~~~~k  153 (301)
T 3q4u_A           79 TQLWLITHYHEMGSLYDYLQL--TTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKP---AIAHRDLKSKNILVKKNGQCC  153 (301)
T ss_dssp             EEEEEEECCCTTCBHHHHHTT--CCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBC---EEECSCCCGGGEEECTTSCEE
T ss_pred             ceeEEehhhccCCCHHHHHhh--cccCHHHHHHHHHHHHHHHHHHHHhhhhccCCC---CeecCCCChHhEEEcCCCCEE
Confidence            457999999999998776532  23345557899999999999999        55   999999999999999999999


Q ss_pred             EeeeeceEEeCCCCcce---eceeeecccccCchhHH------------HHHHHhcCCCcc-eeecc----------ccc
Q 045577          271 ISDFGPARIFGDQTEEV---TGRVIGTQTLKTVPELL------------QAWKLWSEGDPM-EIIDE----------QTK  324 (392)
Q Consensus       271 l~DFGla~~~~~~~~~~---~~~~~gt~~y~a~~~~~------------~~~diws~G~v~-~~ld~----------~~~  324 (392)
                      |+|||+++.........   .....||+.|+| ||..            .+.|+|+.|+++ +++.+          ..+
T Consensus       154 l~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~a-PE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~~~p  232 (301)
T 3q4u_A          154 IADLGLAVMHSQSTNQLDVGNNPRVGTKRYMA-PEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPP  232 (301)
T ss_dssp             ECCCTTCEEEETTTTEEECCCCCCCCCGGGCC-HHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCT
T ss_pred             EeeCCCeeecccccccccccccccccccceeC-hhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCcccccccccc
Confidence            99999998765322221   223479999999 6653            478999999876 44433          222


Q ss_pred             CCCC----------------------C-----CHHHHHHHHHHHHhhcccCcCCCCCHHHHHHHHccC
Q 045577          325 MKGP----------------------F-----SADELVKCIEVGLLCVQQRIEDWPTMSSVLTMLSNE  365 (392)
Q Consensus       325 ~~~~----------------------~-----~~~~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~L~~~  365 (392)
                      +...                      .     .......+.+++..|++.||++|||+.+|++.|++.
T Consensus       233 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i  300 (301)
T 3q4u_A          233 FYDVVPNDPSFEDMRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTKI  300 (301)
T ss_dssp             TTTTSCSSCCHHHHHHHHTTSCCCCCCCGGGGGSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHH
T ss_pred             ccccCCCCcchhhhhHHHhccCCCCCCChhhccCccHHHHHHHHHHHhhcChhhCCCHHHHHHHHhcc
Confidence            2111                      0     012345677899999999999999999999999753

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...

Probab=99.88  E-value=2.6e-23  Score=202.60  Aligned_cols=177  Identities=20%  Similarity=0.266  Sum_probs=123.6

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEc
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLD  264 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~  264 (392)
                      |++.++.......++..|+||||++++++.....+.........++.++.|++.||.|||+.   +|+||||||+||+++
T Consensus       105 h~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~  181 (373)
T 2qol_A          105 HPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDM---GYVHRDLAARNILIN  181 (373)
T ss_dssp             CTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEC
T ss_pred             CCCCCeEEEEEeeCCceEEEEeCCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCcceEEEc
Confidence            77777766655556778999999999999876655443445556889999999999999998   899999999999999


Q ss_pred             CCCCCeEeeeeceEEeCCCCcc--eeceeeecccccCchhHHH------HHHHhcCCCcc-eeec-ccccCCCCC-----
Q 045577          265 AEINPNISDFGPARIFGDQTEE--VTGRVIGTQTLKTVPELLQ------AWKLWSEGDPM-EIID-EQTKMKGPF-----  329 (392)
Q Consensus       265 ~~~~~kl~DFGla~~~~~~~~~--~~~~~~gt~~y~a~~~~~~------~~diws~G~v~-~~ld-~~~~~~~~~-----  329 (392)
                      .++.+||+|||+++........  ......++..|+| ||...      +.|+|+.|+++ +++. +..++....     
T Consensus       182 ~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~y~a-PE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~~~~~~~  260 (373)
T 2qol_A          182 SNLVCKVSDFGLGRVLEDDPEAAYTTRGGKIPIRWTS-PEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVI  260 (373)
T ss_dssp             TTCCEEECCC----------------------CTTSC-HHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTTCCHHHHH
T ss_pred             CCCCEEECcCccccccccCCccceeccCCCcCCCccC-hhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCCCCHHHHH
Confidence            9999999999999876532211  1222345678999 77653      78999999877 4554 433332211     


Q ss_pred             -----------CHHHHHHHHHHHHhhcccCcCCCCCHHHHHHHHccC
Q 045577          330 -----------SADELVKCIEVGLLCVQQRIEDWPTMSSVLTMLSNE  365 (392)
Q Consensus       330 -----------~~~~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~L~~~  365 (392)
                                 +......+.+++..|++.+|++||++.+|+++|+..
T Consensus       261 ~~i~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~~i~~~L~~~  307 (373)
T 2qol_A          261 KAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL  307 (373)
T ss_dssp             HHHHTTEECCCCTTCBHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             HHHHcCCCCCCCccccHHHHHHHHHHhCcChhhCcCHHHHHHHHHHH
Confidence                       111224567788899999999999999999999764

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*

Probab=99.88  E-value=2.6e-23  Score=198.17  Aligned_cols=178  Identities=24%  Similarity=0.256  Sum_probs=130.9

Q ss_pred             CCCccccccCcCC----CCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcC-------CCCceee
Q 045577          185 SGGCKRNWEADCG----DGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPED-------SRLEIIH  253 (392)
Q Consensus       185 s~GCvR~~~l~C~----~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~-------~~~~iiH  253 (392)
                      |++.++.......    ....|+||||++++++.....+.  ...+..+..++.|++.||.|||+.       +..+|+|
T Consensus        77 hpniv~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~--~~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~ivH  154 (322)
T 3soc_A           77 HENILQFIGAEKRGTSVDVDLWLITAFHEKGSLSDFLKAN--VVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISH  154 (322)
T ss_dssp             CTTBCCEEEEEEEECSSSEEEEEEEECCTTCBHHHHHHHC--CBCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECEEEC
T ss_pred             CCCchhhcceeccCCCCCceEEEEEecCCCCCHHHHHHhc--CCCHHHHHHHHHHHHHHHHHHHhhccccccccCCCEEe
Confidence            5555555443221    23479999999999998765432  244555889999999999999986       2347999


Q ss_pred             cccccceeEEcCCCCCeEeeeeceEEeCCCC-cceeceeeecccccCchhHH-----------HHHHHhcCCCcc-eeec
Q 045577          254 RDHKTSNVLLDAEINPNISDFGPARIFGDQT-EEVTGRVIGTQTLKTVPELL-----------QAWKLWSEGDPM-EIID  320 (392)
Q Consensus       254 rDlKp~NIll~~~~~~kl~DFGla~~~~~~~-~~~~~~~~gt~~y~a~~~~~-----------~~~diws~G~v~-~~ld  320 (392)
                      |||||+||+++.++.+||+|||+++...... ........||+.|+| ||+.           .+.|+|+.|+++ +++.
T Consensus       155 ~Dlkp~Nill~~~~~~kL~DFg~a~~~~~~~~~~~~~~~~gt~~y~a-PE~~~~~~~~~~~~~~~~DiwslG~il~el~t  233 (322)
T 3soc_A          155 RDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDTHGQVGTRRYMA-PEVLEGAINFQRDAFLRIDMYAMGLVLWELAS  233 (322)
T ss_dssp             SCCSGGGEEECTTCCEEECCCTTCEEECTTSCCCCCTTCCCCGGGCC-HHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             CCCChHhEEECCCCeEEEccCCcccccccccCccccccCccCccccC-HhhcccccccCcCCCccchhHHHHHHHHHHHh
Confidence            9999999999999999999999998876322 222333679999999 6654           256999999977 5555


Q ss_pred             ccccCCCCC---------------CH-----------------------HHHHHHHHHHHhhcccCcCCCCCHHHHHHHH
Q 045577          321 EQTKMKGPF---------------SA-----------------------DELVKCIEVGLLCVQQRIEDWPTMSSVLTML  362 (392)
Q Consensus       321 ~~~~~~~~~---------------~~-----------------------~~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~L  362 (392)
                      +...+.+..               ..                       .....+.+++..|++.||++|||+.+|++.|
T Consensus       234 g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L  313 (322)
T 3soc_A          234 RCTAADGPVDEYMLPFEEEIGQHPSLEDMQEVVVHKKKRPVLRDYWQKHAGMAMLCETIEECWDHDAEARLSAGCVGERI  313 (322)
T ss_dssp             TBTTSSSCCCCCCCTTHHHHCSSCCHHHHHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred             CCCCCCCCcchhccchhhhhccCCchhhhhhhhhcccCCCCccccccccchHHHHHHHHHHHccCChhhCcCHHHHHHHH
Confidence            533332211               01                       1233477889999999999999999999999


Q ss_pred             ccC
Q 045577          363 SNE  365 (392)
Q Consensus       363 ~~~  365 (392)
                      +..
T Consensus       314 ~~l  316 (322)
T 3soc_A          314 TQM  316 (322)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            864

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}

Probab=99.88  E-value=1e-23  Score=199.49  Aligned_cols=177  Identities=20%  Similarity=0.215  Sum_probs=131.1

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEc
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLD  264 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~  264 (392)
                      |++.++.......++..++||||++++++...............+..++.|++.||.|||+.   +|+||||||+||+++
T Consensus        66 hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~dlkp~Nil~~  142 (310)
T 3s95_A           66 HPNVLKFIGVLYKDKRLNFITEYIKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLHSM---NIIHRDLNSHNCLVR  142 (310)
T ss_dssp             CTTBCCEEEEEEETTEEEEEEECCTTCBHHHHHHHCCTTSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSTTSEEEC
T ss_pred             CcCcccEEEEEecCCeeEEEEEecCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCcCeEEEC
Confidence            56666655554445678999999999999876655333445566889999999999999998   899999999999999


Q ss_pred             CCCCCeEeeeeceEEeCCCCcc-------------eeceeeecccccCchhHH------HHHHHhcCCCcc-eeeccccc
Q 045577          265 AEINPNISDFGPARIFGDQTEE-------------VTGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIIDEQTK  324 (392)
Q Consensus       265 ~~~~~kl~DFGla~~~~~~~~~-------------~~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld~~~~  324 (392)
                      .++.+||+|||+++........             ......||+.|+| ||..      .+.|+|+.|+++ +++.+...
T Consensus       143 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~a-PE~~~~~~~~~~~Di~slG~~l~el~~g~~~  221 (310)
T 3s95_A          143 ENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMA-PEMINGRSYDEKVDVFSFGIVLCEIIGRVNA  221 (310)
T ss_dssp             TTSCEEECCCTTCEECC--------------------CCCCSCGGGCC-HHHHTTCCCCTHHHHHHHHHHHHHHHHTCCS
T ss_pred             CCCCEEEeecccceecccccccccccccccccccccccccCCCcceeC-HHHhcCCCCCcHHHHHHHHHHHHHHhcCCCC
Confidence            9999999999999876522111             1113579999999 7765      378999999877 44433222


Q ss_pred             CCCCC------------------CHHHHHHHHHHHHhhcccCcCCCCCHHHHHHHHccC
Q 045577          325 MKGPF------------------SADELVKCIEVGLLCVQQRIEDWPTMSSVLTMLSNE  365 (392)
Q Consensus       325 ~~~~~------------------~~~~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~L~~~  365 (392)
                      .....                  +......+.+++..|++.||++||++.++++.|+..
T Consensus       222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~~l~~~L~~l  280 (310)
T 3s95_A          222 DPDYLPRTMDFGLNVRGFLDRYCPPNCPPSFFPITVRCCDLDPEKRPSFVKLEHWLETL  280 (310)
T ss_dssp             STTTSCBCTTSSBCHHHHHHHTCCTTCCTTHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             CcchhhhHHHHhhhhhccccccCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence            21110                  011112466788899999999999999999999875

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...

Probab=99.88  E-value=1.4e-23  Score=200.41  Aligned_cols=176  Identities=19%  Similarity=0.219  Sum_probs=129.5

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEc
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLD  264 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~  264 (392)
                      |++.++..... ..++.++++||+.++++.....+.........++.++.|++.||.|||+.   +|+||||||+||+++
T Consensus        76 h~~iv~~~~~~-~~~~~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~Dikp~NIll~  151 (327)
T 3poz_A           76 NPHVCRLLGIC-LTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVK  151 (327)
T ss_dssp             BTTBCCEEEEE-ESSSEEEEEECCTTCBHHHHHHHSTTSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEE
T ss_pred             CCCEeEEEEEE-ecCCeEEEEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCChheEEEC
Confidence            55555554433 24568999999999998876655444445556889999999999999998   899999999999999


Q ss_pred             CCCCCeEeeeeceEEeCCC-CcceeceeeecccccCchhHH------HHHHHhcCCCcc-eeec-ccccCCCCC------
Q 045577          265 AEINPNISDFGPARIFGDQ-TEEVTGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIID-EQTKMKGPF------  329 (392)
Q Consensus       265 ~~~~~kl~DFGla~~~~~~-~~~~~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld-~~~~~~~~~------  329 (392)
                      .++.+||+|||+++..... .........+|..|+| ||..      .+.|+|+.|+++ +++. +...+.+..      
T Consensus       152 ~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~t~~y~a-PE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~  230 (327)
T 3poz_A          152 TPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA-LESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISS  230 (327)
T ss_dssp             ETTEEEECCTTHHHHHTTTCC-------CCCGGGSC-HHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHH
T ss_pred             CCCCEEEccCcceeEccCCcccccccCCCccccccC-hHHhccCCCCchhhhhhhHHHHHHHHhcCCCCccCCCHHHHHH
Confidence            9999999999999876522 2222333556889999 7754      478999999876 5565 433332211      


Q ss_pred             ----------CHHHHHHHHHHHHhhcccCcCCCCCHHHHHHHHccC
Q 045577          330 ----------SADELVKCIEVGLLCVQQRIEDWPTMSSVLTMLSNE  365 (392)
Q Consensus       330 ----------~~~~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~L~~~  365 (392)
                                +......+.+++..|++.+|++||++.++++.|+..
T Consensus       231 ~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l~~~  276 (327)
T 3poz_A          231 ILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKM  276 (327)
T ss_dssp             HHHTTCCCCCCTTBCHHHHHHHHHHTCSCGGGSCCHHHHHHHHHHH
T ss_pred             HHHcCCCCCCCccCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHH
Confidence                      112233567788899999999999999999998754

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...

Probab=99.87  E-value=2.9e-23  Score=194.54  Aligned_cols=176  Identities=16%  Similarity=0.169  Sum_probs=122.7

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEc
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLD  264 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~  264 (392)
                      |++.++.... +..+..+++|||++++++...............+..++.|++.||.|||+.   +|+||||||+||+++
T Consensus        79 h~~iv~~~~~-~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~lH~~---~i~H~Dlkp~Nil~~  154 (289)
T 3og7_A           79 HVNILLFMGY-STAPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAK---SIIHRDLKSNNIFLH  154 (289)
T ss_dssp             CTTBCCEEEE-ECSSSCEEEEECCCEEEHHHHHTTC---CCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEE
T ss_pred             CCcEEEEEee-ccCCccEEEEEecCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhC---CcccccCccceEEEC
Confidence            5555544442 345678999999999988765544333345556789999999999999998   899999999999999


Q ss_pred             CCCCCeEeeeeceEEeCC-CCcceeceeeecccccCchhHH---------HHHHHhcCCCcc-eeecccccCCCCCCHH-
Q 045577          265 AEINPNISDFGPARIFGD-QTEEVTGRVIGTQTLKTVPELL---------QAWKLWSEGDPM-EIIDEQTKMKGPFSAD-  332 (392)
Q Consensus       265 ~~~~~kl~DFGla~~~~~-~~~~~~~~~~gt~~y~a~~~~~---------~~~diws~G~v~-~~ld~~~~~~~~~~~~-  332 (392)
                      .++.+||+|||+++.... ..........||+.|+| ||..         .+.|+|+.|+++ +++.+..++......+ 
T Consensus       155 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~a-PE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~  233 (289)
T 3og7_A          155 EDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMA-PEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQ  233 (289)
T ss_dssp             TTTEEEECCCC------------------CCCTTCC-HHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCCCHHH
T ss_pred             CCCCEEEccceeccccccccccccccccCCCccccC-chhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccchHHH
Confidence            999999999999986542 22223334678999999 7765         278999999876 5555543433322221 


Q ss_pred             --------------------HHHHHHHHHHhhcccCcCCCCCHHHHHHHHccC
Q 045577          333 --------------------ELVKCIEVGLLCVQQRIEDWPTMSSVLTMLSNE  365 (392)
Q Consensus       333 --------------------~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~L~~~  365 (392)
                                          ....+.+++..|++.+|++||++.+++++|+..
T Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~l  286 (289)
T 3og7_A          234 IIEMVGRGSLSPDLSKVRSNCPKRMKRLMAECLKKKRDERPSFPRILAEIEEL  286 (289)
T ss_dssp             HHHHHHHTSCCCCTTSSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHT
T ss_pred             HHHHhcccccCcchhhccccCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHH
Confidence                                224567788899999999999999999999876

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*

Probab=99.87  E-value=3.3e-23  Score=193.28  Aligned_cols=176  Identities=19%  Similarity=0.196  Sum_probs=121.2

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEc
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLD  264 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~  264 (392)
                      |++.++..... .++..|++|||++++++...............+..++.|++.||.|||+.   +++||||||+||+++
T Consensus        75 h~~iv~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~  150 (281)
T 1mp8_A           75 HPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVS  150 (281)
T ss_dssp             CTTBCCEEEEE-CSSSCEEEEECCTTEEHHHHHHHTTTTSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEE
T ss_pred             CCccceEEEEE-ccCccEEEEecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecccccHHHEEEC
Confidence            55666555442 35678999999999998776554443345556888999999999999998   899999999999999


Q ss_pred             CCCCCeEeeeeceEEeCCCCcceeceeeecccccCchhHHH------HHHHhcCCCcc-eeec-ccccCCCCCCH-----
Q 045577          265 AEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELLQ------AWKLWSEGDPM-EIID-EQTKMKGPFSA-----  331 (392)
Q Consensus       265 ~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~~------~~diws~G~v~-~~ld-~~~~~~~~~~~-----  331 (392)
                      .++.+||+|||+++..............+++.|+| ||...      +.|+|+.|+++ +++. +..++.+....     
T Consensus       151 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~a-PE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~~~~~~~~~  229 (281)
T 1mp8_A          151 SNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMA-PESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGR  229 (281)
T ss_dssp             ETTEEEECC-------------------CCGGGCC-HHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHH
T ss_pred             CCCCEEECccccccccCcccccccccCCCcccccC-hhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCcCCHHHHHHH
Confidence            99999999999998765333223333567788999 77653      68999999876 4554 43333322111     


Q ss_pred             -----------HHHHHHHHHHHhhcccCcCCCCCHHHHHHHHccC
Q 045577          332 -----------DELVKCIEVGLLCVQQRIEDWPTMSSVLTMLSNE  365 (392)
Q Consensus       332 -----------~~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~L~~~  365 (392)
                                 .....+.+++..|++.||++||++.++++.|+..
T Consensus       230 i~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~  274 (281)
T 1mp8_A          230 IENGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTI  274 (281)
T ss_dssp             HHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             HHcCCCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence                       1223466788899999999999999999999764

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*

Probab=99.87  E-value=4.2e-23  Score=199.10  Aligned_cols=137  Identities=23%  Similarity=0.262  Sum_probs=105.8

Q ss_pred             cchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEcCCCCCeEeeeeceEEeCC-CCcceeceeeecccccCchhH
Q 045577          225 YSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEINPNISDFGPARIFGD-QTEEVTGRVIGTQTLKTVPEL  303 (392)
Q Consensus       225 ~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~~~~~~kl~DFGla~~~~~-~~~~~~~~~~gt~~y~a~~~~  303 (392)
                      ....+..++.|++.||.|||+.   +|+||||||+||+++.++.+||+|||+++.... ..........||+.|+| ||+
T Consensus       191 ~~~~~~~~~~ql~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~t~~y~a-PE~  266 (359)
T 3vhe_A          191 TLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMA-PET  266 (359)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCCGGGSCTTSCTTCEEC--CEECGGGCC-HHH
T ss_pred             CHHHHHHHHHHHHHHHHHHHHC---CcccCCCChhhEEEcCCCcEEEEeccceeeecccccchhccccCCCceeEC-hhh
Confidence            3444788999999999999998   899999999999999999999999999986542 22233344678999999 776


Q ss_pred             H------HHHHHhcCCCcc-eeec-ccccCCCCCCHH-----------------HHHHHHHHHHhhcccCcCCCCCHHHH
Q 045577          304 L------QAWKLWSEGDPM-EIID-EQTKMKGPFSAD-----------------ELVKCIEVGLLCVQQRIEDWPTMSSV  358 (392)
Q Consensus       304 ~------~~~diws~G~v~-~~ld-~~~~~~~~~~~~-----------------~~~~~~~i~~~Cl~~dp~~RPsm~eV  358 (392)
                      .      .+.|+|+.|+++ +++. +..++.+....+                 ....+.+++..|++.||++||++.+|
T Consensus       267 ~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~el  346 (359)
T 3vhe_A          267 IFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSEL  346 (359)
T ss_dssp             HHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred             hcCCCCCchhhhhhHHHHHHHHHhcCCCCCCccchhHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHccCChhhCCCHHHH
Confidence            5      478999999977 5554 544443322211                 12256678889999999999999999


Q ss_pred             HHHHccC
Q 045577          359 LTMLSNE  365 (392)
Q Consensus       359 v~~L~~~  365 (392)
                      ++.|+..
T Consensus       347 l~~L~~~  353 (359)
T 3vhe_A          347 VEHLGNL  353 (359)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHH
Confidence            9999864

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}

Probab=99.87  E-value=3.8e-23  Score=201.87  Aligned_cols=176  Identities=22%  Similarity=0.223  Sum_probs=133.9

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhc---------------cccchhhhhHHHHHHHhhhhcCcCCCC
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFEC---------------SKYSSYVTNILYGIARVILYLPEDSRL  249 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~---------------~~~~~~~~~i~~~ia~gL~yLH~~~~~  249 (392)
                      |++.++.......++..++||||++++++.........               ...+..+..++.|++.||.|||+.   
T Consensus       134 hpnIv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---  210 (382)
T 3tt0_A          134 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK---  210 (382)
T ss_dssp             CTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHHT---
T ss_pred             CchhhhheeeeccCCceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhC---
Confidence            77777766655556779999999999999876544321               134555789999999999999998   


Q ss_pred             ceeecccccceeEEcCCCCCeEeeeeceEEeCCCC-cceeceeeecccccCchhHH------HHHHHhcCCCcc-eeec-
Q 045577          250 EIIHRDHKTSNVLLDAEINPNISDFGPARIFGDQT-EEVTGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIID-  320 (392)
Q Consensus       250 ~iiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~-~~~~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld-  320 (392)
                      +|+||||||+||+++.++.+||+|||+++...... ........+|+.|+| ||..      .+.|+|+.|+++ +++. 
T Consensus       211 ~ivH~Dlkp~NIll~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~a-PE~~~~~~~~~~~DiwslG~il~ellt~  289 (382)
T 3tt0_A          211 KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMA-PEALFDRIYTHQSDVWSFGVLLWEIFTL  289 (382)
T ss_dssp             TCCCSCCCGGGEEECTTCCEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSC-HHHHHSCCCCHHHHHHHHHHHHHHHHTT
T ss_pred             CEecCCCCcceEEEcCCCcEEEcccCcccccccccccccccCCCCCcceeC-HHHhcCCCCCchhHHHHHHHHHHHHHhC
Confidence            89999999999999999999999999998665221 122333567889999 7764      478999999987 4555 


Q ss_pred             ccccCCCCCCHHH-----------------HHHHHHHHHhhcccCcCCCCCHHHHHHHHccC
Q 045577          321 EQTKMKGPFSADE-----------------LVKCIEVGLLCVQQRIEDWPTMSSVLTMLSNE  365 (392)
Q Consensus       321 ~~~~~~~~~~~~~-----------------~~~~~~i~~~Cl~~dp~~RPsm~eVv~~L~~~  365 (392)
                      +...+.+. +.++                 ...+.+++..|++.+|++||++.+|++.|+..
T Consensus       290 g~~p~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~  350 (382)
T 3tt0_A          290 GGSPYPGV-PVEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI  350 (382)
T ss_dssp             SCCSSTTC-CHHHHHHHHHTTCCCCCCSSCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             CCCCCCCC-CHHHHHHHHHcCCCCCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence            43333222 2221                 23466788899999999999999999999876

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*

Probab=99.87  E-value=5.9e-23  Score=193.57  Aligned_cols=170  Identities=16%  Similarity=0.237  Sum_probs=129.3

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEc
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLD  264 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~  264 (392)
                      |++.++.......++..|+||||++++++.....+.  ......+..++.|++.||.|||+.   +|+||||||+||+++
T Consensus        76 hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~--~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~Dlkp~Nil~~  150 (297)
T 3fxz_A           76 NPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTET--CMDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLG  150 (297)
T ss_dssp             CTTBCCEEEEEEETTEEEEEEECCTTCBHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEC
T ss_pred             CCCCCeEeEEEEECCEEEEEEECCCCCCHHHHHhhc--CCCHHHHHHHHHHHHHHHHHHHhC---CceeCCCCHHHEEEC
Confidence            666666655444456789999999999997755432  234455788999999999999998   899999999999999


Q ss_pred             CCCCCeEeeeeceEEeCCCCcceeceeeecccccCchhHH------HHHHHhcCCCcc-eeecccccCCCCCCH------
Q 045577          265 AEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIIDEQTKMKGPFSA------  331 (392)
Q Consensus       265 ~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld~~~~~~~~~~~------  331 (392)
                      .++.+||+|||+++....... ......||+.|+| ||..      .+.|+|+.|+++ +++.+..++.+....      
T Consensus       151 ~~~~~kl~Dfg~~~~~~~~~~-~~~~~~gt~~y~a-PE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~  228 (297)
T 3fxz_A          151 MDGSVKLTDFGFCAQITPEQS-KRSTMVGTPYWMA-PEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLI  228 (297)
T ss_dssp             TTCCEEECCCTTCEECCSTTC-CBCCCCSCGGGCC-HHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHH
T ss_pred             CCCCEEEeeCCCceecCCccc-ccCCccCCcCccC-hhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH
Confidence            999999999999987653222 2334679999999 7765      378999999877 555554444332211      


Q ss_pred             ------------HHHHHHHHHHHhhcccCcCCCCCHHHHHHH
Q 045577          332 ------------DELVKCIEVGLLCVQQRIEDWPTMSSVLTM  361 (392)
Q Consensus       332 ------------~~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~  361 (392)
                                  .....+.+++..|++.||++||++.++++.
T Consensus       229 ~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h  270 (297)
T 3fxz_A          229 ATNGTPELQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQH  270 (297)
T ss_dssp             HHHCSCCCSCGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred             HhCCCCCCCCccccCHHHHHHHHHHccCChhHCcCHHHHhhC
Confidence                        112345678889999999999999999863

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...

Probab=99.87  E-value=7.2e-23  Score=204.45  Aligned_cols=186  Identities=15%  Similarity=0.191  Sum_probs=132.9

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhh-ccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEE
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFE-CSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLL  263 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~-~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll  263 (392)
                      |++.++.... |.++..|+||||++++++........ .......+..++.|++.||.|||++   +|+||||||+|||+
T Consensus       238 hp~iv~~~~~-~~~~~~~iv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~ivHrDlkp~Nill  313 (452)
T 1fmk_A          238 HEKLVQLYAV-VSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILV  313 (452)
T ss_dssp             CTTBCCEEEE-ECSSSCEEEECCCTTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEE
T ss_pred             CCCEeeEEEE-EcCCceEEEehhhcCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChhhEEE
Confidence            7777777654 34577999999999999987654322 2234555889999999999999998   89999999999999


Q ss_pred             cCCCCCeEeeeeceEEeCCCCcceeceeeecccccCchhHH------HHHHHhcCCCcc-eeec-ccccCCCCC------
Q 045577          264 DAEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIID-EQTKMKGPF------  329 (392)
Q Consensus       264 ~~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld-~~~~~~~~~------  329 (392)
                      +.++.+||+|||+++..............++..|+| ||..      .+.|+|++|+++ +++. +..++.+..      
T Consensus       314 ~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~y~a-PE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~~~~  392 (452)
T 1fmk_A          314 GENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTA-PEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLD  392 (452)
T ss_dssp             CGGGCEEECCCCTTC--------------CCGGGSC-HHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHH
T ss_pred             CCCCCEEECCCccceecCCCceecccCCcccccccC-HhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCCCCHHHHHH
Confidence            999999999999998764322222233456788999 7765      378999999877 5555 433332221      


Q ss_pred             ----------CHHHHHHHHHHHHhhcccCcCCCCCHHHHHHHHccCCCCCCCCCCc
Q 045577          330 ----------SADELVKCIEVGLLCVQQRIEDWPTMSSVLTMLSNESIKVPQPEEV  375 (392)
Q Consensus       330 ----------~~~~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~L~~~~~~~~~p~~p  375 (392)
                                +......+.+++..|++.+|++|||+.+|++.|+......+...+|
T Consensus       393 ~i~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~~l~~~L~~~~~~~~~~~~~  448 (452)
T 1fmk_A          393 QVERGYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTEPQYQP  448 (452)
T ss_dssp             HHHTTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTTTSCSCCCCCC
T ss_pred             HHHcCCCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhccCCccccc
Confidence                      1122235677888999999999999999999999875554444333

>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=99.87  E-value=2.4e-23  Score=192.85  Aligned_cols=177  Identities=19%  Similarity=0.242  Sum_probs=131.8

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEc
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLD  264 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~  264 (392)
                      |++.++.......++..|++|||++++++...............+..++.|++.||.|||+.   +++||||||+||+++
T Consensus        64 h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dikp~Nil~~  140 (269)
T 4hcu_A           64 HPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEA---CVIHRDLAARNCLVG  140 (269)
T ss_dssp             CTTBCCEEEEECSSSSEEEEEECCTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEC
T ss_pred             CCCEeeEEEEEecCCceEEEEEeCCCCcHHHHHHhcCcccCHHHHHHHHHHHHHHHHHHHhC---CeecCCcchheEEEc
Confidence            55666555554445678999999999998876654444445666889999999999999998   899999999999999


Q ss_pred             CCCCCeEeeeeceEEeCCCCcceeceeeecccccCchhHHH------HHHHhcCCCcc-eeec-ccccCCCCCCHH----
Q 045577          265 AEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELLQ------AWKLWSEGDPM-EIID-EQTKMKGPFSAD----  332 (392)
Q Consensus       265 ~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~~------~~diws~G~v~-~~ld-~~~~~~~~~~~~----  332 (392)
                      .++.+||+|||+++..............+++.|+| ||...      +.|+|+.|+++ +++. +..++......+    
T Consensus       141 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~a-PE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~~~~~~~~~  219 (269)
T 4hcu_A          141 ENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWAS-PEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVED  219 (269)
T ss_dssp             GGGCEEECCTTGGGGBCCHHHHSTTSTTCCGGGCC-HHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHH
T ss_pred             CCCCEEeccccccccccccccccccCcccccccCC-HHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCCCCHHHHHHH
Confidence            99999999999987654222222223456778999 77653      78999999877 4555 433332221111    


Q ss_pred             ------------HHHHHHHHHHhhcccCcCCCCCHHHHHHHHccC
Q 045577          333 ------------ELVKCIEVGLLCVQQRIEDWPTMSSVLTMLSNE  365 (392)
Q Consensus       333 ------------~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~L~~~  365 (392)
                                  ....+.+++..|++.+|++||++.++++.|+..
T Consensus       220 ~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~l  264 (269)
T 4hcu_A          220 ISTGFRLYKPRLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEI  264 (269)
T ss_dssp             HHTTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             HhcCccCCCCCcCCHHHHHHHHHHccCCcccCcCHHHHHHHHHHH
Confidence                        123456788899999999999999999999864

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7

Probab=99.87  E-value=8e-23  Score=196.08  Aligned_cols=179  Identities=20%  Similarity=0.173  Sum_probs=134.7

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhc----------------------cccchhhhhHHHHHHHhhhh
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFEC----------------------SKYSSYVTNILYGIARVILY  242 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~----------------------~~~~~~~~~i~~~ia~gL~y  242 (392)
                      |++.++.......++..|++|||++++++.........                      ......+..++.|++.||.|
T Consensus       108 hp~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~  187 (344)
T 1rjb_A          108 HENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEF  187 (344)
T ss_dssp             CTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHH
T ss_pred             CCCeeeEEEEEeeCCccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHH
Confidence            77777776665556789999999999998775543221                      12444578899999999999


Q ss_pred             cCcCCCCceeecccccceeEEcCCCCCeEeeeeceEEeCC-CCcceeceeeecccccCchhHH------HHHHHhcCCCc
Q 045577          243 LPEDSRLEIIHRDHKTSNVLLDAEINPNISDFGPARIFGD-QTEEVTGRVIGTQTLKTVPELL------QAWKLWSEGDP  315 (392)
Q Consensus       243 LH~~~~~~iiHrDlKp~NIll~~~~~~kl~DFGla~~~~~-~~~~~~~~~~gt~~y~a~~~~~------~~~diws~G~v  315 (392)
                      ||+.   +|+||||||+||+++.++.+||+|||+++.... ..........||+.|+| ||..      .+.|+|++|++
T Consensus       188 LH~~---~ivH~Dikp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~a-PE~~~~~~~~~~~Di~slG~i  263 (344)
T 1rjb_A          188 LEFK---SCVHRDLAARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMA-PESLFEGIYTIKSDVWSYGIL  263 (344)
T ss_dssp             HHHT---TEEETTCSGGGEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCC-HHHHHHCCCCHHHHHHHHHHH
T ss_pred             HHhC---CcccCCCChhhEEEcCCCcEEeCCCccCcccccCccceeccCccCccCccC-HHHhccCCCChhHhHHHHHHH
Confidence            9998   899999999999999999999999999986642 22223344678889999 7755      37899999998


Q ss_pred             c-eeec-ccccCCCCCCHH-----------------HHHHHHHHHHhhcccCcCCCCCHHHHHHHHccCCC
Q 045577          316 M-EIID-EQTKMKGPFSAD-----------------ELVKCIEVGLLCVQQRIEDWPTMSSVLTMLSNESI  367 (392)
Q Consensus       316 ~-~~ld-~~~~~~~~~~~~-----------------~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~L~~~~~  367 (392)
                      + +++. +..++.+....+                 ....+.+++..|++.||.+||++.++++.|+....
T Consensus       264 l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~  334 (344)
T 1rjb_A          264 LWEIFSLGVNPYPGIPVDANFYKLIQNGFKMDQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFLGCQLA  334 (344)
T ss_dssp             HHHHTTTSCCSSTTCCCSHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC-
T ss_pred             HHHHHcCCCCCcccCCcHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHH
Confidence            7 5554 433333322111                 12356678889999999999999999999987633

>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A

Probab=99.87  E-value=1.9e-23  Score=202.55  Aligned_cols=161  Identities=15%  Similarity=0.106  Sum_probs=123.2

Q ss_pred             CeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEc--CCCCCeEeeeece
Q 045577          200 EVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLD--AEINPNISDFGPA  277 (392)
Q Consensus       200 ~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~--~~~~~kl~DFGla  277 (392)
                      ..|++|||+ ++++...............++.++.|++.||.|||+.   +|+||||||+|||++  .++.+||+|||++
T Consensus       126 ~~~lv~e~~-g~~L~~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~---~iiHrDlkp~Nill~~~~~~~~kl~DFG~a  201 (364)
T 3op5_A          126 YRFMIMDRF-GSDLQKIYEANAKRFSRKTVLQLSLRILDILEYIHEH---EYVHGDIKASNLLLNYKNPDQVYLVDYGLA  201 (364)
T ss_dssp             EEEEEEECE-EEEHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEESSCTTCEEECCCTTC
T ss_pred             eEEEEEeCC-CCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC---CeEEecCCHHHEEEecCCCCeEEEEECCcc
Confidence            379999999 8888776544333345666899999999999999998   899999999999999  8899999999999


Q ss_pred             EEeCCCCc------ceeceeeecccccCchhHH------HHHHHhcCCCcc-eeecccccCCCCCCH-H-----------
Q 045577          278 RIFGDQTE------EVTGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIIDEQTKMKGPFSA-D-----------  332 (392)
Q Consensus       278 ~~~~~~~~------~~~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld~~~~~~~~~~~-~-----------  332 (392)
                      +.+.....      .......||+.|+| ||..      .+.|+|++|+++ +++.+..++.+.... .           
T Consensus       202 ~~~~~~~~~~~~~~~~~~~~~gt~~y~a-PE~~~~~~~~~~~Di~slG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~  280 (364)
T 3op5_A          202 YRYCPEGVHKAYAADPKRCHDGTIEFTS-IDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWEDNLKDPKYVRDSKIRYRE  280 (364)
T ss_dssp             EESSGGGCCCCSSCCSSCCCCCCTTTCC-HHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTCHHHHHHHHHHHHH
T ss_pred             eecccCCcccccccCcccccCCCCCccC-HHHhCCCCCCchhhHHHHHHHHHHHHhCCCCccccccCHHHHHHHHHHhhh
Confidence            88752211      11123459999999 7765      478999999876 666665444432111 0           


Q ss_pred             --------------HHHHHHHHHHhhcccCcCCCCCHHHHHHHHccC
Q 045577          333 --------------ELVKCIEVGLLCVQQRIEDWPTMSSVLTMLSNE  365 (392)
Q Consensus       333 --------------~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~L~~~  365 (392)
                                    ....+.+++..|++.+|++||++.+|++.|+..
T Consensus       281 ~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~RP~~~~l~~~l~~~  327 (364)
T 3op5_A          281 NIASLMDKCFPAANAPGEIAKYMETVKLLDYTEKPLYENLRDILLQG  327 (364)
T ss_dssp             CHHHHHHHHSCTTCCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHH
T ss_pred             hHHHHHHHhcccccCHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHH
Confidence                          022456788899999999999999999998765

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}

Probab=99.87  E-value=5.4e-23  Score=193.47  Aligned_cols=176  Identities=22%  Similarity=0.234  Sum_probs=128.1

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEc
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLD  264 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~  264 (392)
                      |++.++.......++..|++|||++++++.....+.. ......+..++.|++.||.|||+.   +|+||||||+||+++
T Consensus        70 hp~iv~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~Dlkp~Nil~~  145 (294)
T 4eqm_A           70 HQNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYIESHG-PLSVDTAINFTNQILDGIKHAHDM---RIVHRDIKPQNILID  145 (294)
T ss_dssp             BTTBCCEEEEEECSSEEEEEEECCCSCBHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEC
T ss_pred             CCCCceEEEeeeeCCeEEEEEeCCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEC
Confidence            5555555554444567899999999999987654433 234555889999999999999998   899999999999999


Q ss_pred             CCCCCeEeeeeceEEeCCCCcceeceeeecccccCchhHHH------HHHHhcCCCcc-eeecccccCCCCCCHH-----
Q 045577          265 AEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELLQ------AWKLWSEGDPM-EIIDEQTKMKGPFSAD-----  332 (392)
Q Consensus       265 ~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~~------~~diws~G~v~-~~ld~~~~~~~~~~~~-----  332 (392)
                      .++.+||+|||+++..............||+.|+| ||...      ..|+|+.|+++ +++.+..++.+....+     
T Consensus       146 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~a-PE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~  224 (294)
T 4eqm_A          146 SNKTLKIFDFGIAKALSETSLTQTNHVLGTVQYFS-PEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETAVSIAIKH  224 (294)
T ss_dssp             TTSCEEECCCSSSTTC-------------CCSSCC-HHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCSSCHHHHHHHH
T ss_pred             CCCCEEEEeCCCccccccccccccCccccCccccC-HhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHH
Confidence            99999999999987654333333344679999999 77653      57999999876 5666544443322111     


Q ss_pred             ---------------HHHHHHHHHHhhcccCcCCCC-CHHHHHHHHccC
Q 045577          333 ---------------ELVKCIEVGLLCVQQRIEDWP-TMSSVLTMLSNE  365 (392)
Q Consensus       333 ---------------~~~~~~~i~~~Cl~~dp~~RP-sm~eVv~~L~~~  365 (392)
                                     ....+.+++.+|++.||++|| ++.++.+.|+..
T Consensus       225 ~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~R~~~~~~l~~~l~~~  273 (294)
T 4eqm_A          225 IQDSVPNVTTDVRKDIPQSLSNVILRATEKDKANRYKTIQEMKDDLSSV  273 (294)
T ss_dssp             HSSCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCSSHHHHHHHHHTS
T ss_pred             hhccCCCcchhcccCCCHHHHHHHHHHhcCCHhHccccHHHHHHHHHHH
Confidence                           123567788899999999998 899999999886

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A

Probab=99.87  E-value=8.3e-23  Score=206.30  Aligned_cols=177  Identities=16%  Similarity=0.193  Sum_probs=134.8

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhh-ccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEE
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFE-CSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLL  263 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~-~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll  263 (392)
                      |++.++........+..|+||||++++++.....+.. .......++.++.||+.||.|||++   +|+||||||+|||+
T Consensus       275 hpniv~l~~~~~~~~~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll  351 (495)
T 1opk_A          275 HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK---NFIHRNLAARNCLV  351 (495)
T ss_dssp             CTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEE
T ss_pred             CCCEeeEEEEEecCCcEEEEEEccCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChhhEEE
Confidence            8888887776555678999999999999887654322 2234555788999999999999998   89999999999999


Q ss_pred             cCCCCCeEeeeeceEEeCCCCcceeceeeecccccCchhHHH------HHHHhcCCCcc-eeec-ccccCCCCC------
Q 045577          264 DAEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELLQ------AWKLWSEGDPM-EIID-EQTKMKGPF------  329 (392)
Q Consensus       264 ~~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~~------~~diws~G~v~-~~ld-~~~~~~~~~------  329 (392)
                      +.++.+||+|||+++..............++..|+| ||...      +.|+|++|+++ +++. +..++.+..      
T Consensus       352 ~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~y~a-PE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~~~~~~~  430 (495)
T 1opk_A          352 GENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTA-PESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYE  430 (495)
T ss_dssp             CGGGCEEECCTTCEECCTTCCEECCTTCCCCGGGCC-HHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHH
T ss_pred             CCCCcEEEeecccceeccCCceeecCCCcCCcceeC-HhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCCCHHHHHH
Confidence            999999999999998765322222223456788999 77653      78999999877 4554 332322211      


Q ss_pred             ----------CHHHHHHHHHHHHhhcccCcCCCCCHHHHHHHHccC
Q 045577          330 ----------SADELVKCIEVGLLCVQQRIEDWPTMSSVLTMLSNE  365 (392)
Q Consensus       330 ----------~~~~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~L~~~  365 (392)
                                +......+.+++..||+.||++||++.+|++.|+..
T Consensus       431 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~el~~~L~~~  476 (495)
T 1opk_A          431 LLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM  476 (495)
T ss_dssp             HHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTS
T ss_pred             HHHcCCCCCCCCCCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHH
Confidence                      112224566788899999999999999999999886

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B

Probab=99.87  E-value=5.1e-23  Score=205.63  Aligned_cols=178  Identities=19%  Similarity=0.253  Sum_probs=133.5

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhh-ccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEE
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFE-CSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLL  263 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~-~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll  263 (392)
                      |++.++.... |..+..|+||||++++++........ .......++.++.||+.||.|||++   +|+||||||+|||+
T Consensus       242 h~~iv~l~~~-~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nill  317 (454)
T 1qcf_A          242 HDKLVKLHAV-VTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQR---NYIHRDLRAANILV  317 (454)
T ss_dssp             CTTBCCEEEE-ECSSSCEEEECCCTTCBHHHHHHSHHHHTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCSGGGEEE
T ss_pred             CCCEeeEEEE-EeCCccEEEEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCHHHEEE
Confidence            7777776554 44677999999999999987654432 2234455788999999999999998   89999999999999


Q ss_pred             cCCCCCeEeeeeceEEeCCCCcceeceeeecccccCchhHH------HHHHHhcCCCcc-eeec-ccccCCCCCCH----
Q 045577          264 DAEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIID-EQTKMKGPFSA----  331 (392)
Q Consensus       264 ~~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld-~~~~~~~~~~~----  331 (392)
                      +.++.+||+|||+++..............++..|+| ||..      .+.|+|++|+++ +++. +..++.+....    
T Consensus       318 ~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~y~a-PE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~~~~~~~~~  396 (454)
T 1qcf_A          318 SASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTA-PEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIR  396 (454)
T ss_dssp             CTTCCEEECSTTGGGGBCCHHHHTTCSSSSCGGGSC-HHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHH
T ss_pred             CCCCcEEEeeCCCceEcCCCceeccCCCcccccccC-HHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCCCCHHHHHH
Confidence            999999999999997654221111222346778999 7765      378999999977 5665 54343322111    


Q ss_pred             ------------HHHHHHHHHHHhhcccCcCCCCCHHHHHHHHccCCC
Q 045577          332 ------------DELVKCIEVGLLCVQQRIEDWPTMSSVLTMLSNESI  367 (392)
Q Consensus       332 ------------~~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~L~~~~~  367 (392)
                                  .....+.+++..||+.||++||++.+|++.|+....
T Consensus       397 ~i~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~~i~~~L~~~~~  444 (454)
T 1qcf_A          397 ALERGYRMPRPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDDFYT  444 (454)
T ss_dssp             HHHHTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSS
T ss_pred             HHHcCCCCCCCCCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHHh
Confidence                        122356678889999999999999999999998743

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*

Probab=99.87  E-value=2.5e-22  Score=189.41  Aligned_cols=177  Identities=23%  Similarity=0.289  Sum_probs=133.9

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhh--ccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeE
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFE--CSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVL  262 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~--~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIl  262 (392)
                      |++.++.......++..+++|||++++++........  .......+..++.|++.||.|||+.   +++||||||+||+
T Consensus        89 h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dlkp~Nil  165 (307)
T 2nru_A           89 HENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHEN---HHIHRDIKSANIL  165 (307)
T ss_dssp             CTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEE
T ss_pred             CCCeEEEEEEEecCCceEEEEEecCCCcHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhcC---CeecCCCCHHHEE
Confidence            5566665555555678899999999999876543221  1234555788999999999999998   8999999999999


Q ss_pred             EcCCCCCeEeeeeceEEeCCC-CcceeceeeecccccCchhHH-----HHHHHhcCCCcc-eeecccccCCC--------
Q 045577          263 LDAEINPNISDFGPARIFGDQ-TEEVTGRVIGTQTLKTVPELL-----QAWKLWSEGDPM-EIIDEQTKMKG--------  327 (392)
Q Consensus       263 l~~~~~~kl~DFGla~~~~~~-~~~~~~~~~gt~~y~a~~~~~-----~~~diws~G~v~-~~ld~~~~~~~--------  327 (392)
                      ++.++.+||+|||+++..... .........|++.|+| ||..     .+.|+|+.|+++ +++.+.+.+..        
T Consensus       166 i~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~g~~~y~a-PE~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~  244 (307)
T 2nru_A          166 LDEAFTAKISDFGLARASEKFAQTVMTSRIVGTTAYMA-PEALRGEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLL  244 (307)
T ss_dssp             ECTTCCEEECCCTTCEECCSCSSCEECSSCCSCGGGCC-HHHHTTEECTHHHHHHHHHHHHHHHHCCCSBCTTBSSSBTT
T ss_pred             EcCCCcEEEeecccccccccccccccccccCCCcCcCC-hHHhcCCCCccchhHHHHHHHHHHHHCCCCcccCcchHHHH
Confidence            999999999999999876532 2223334678999999 7764     378999999876 44444332221        


Q ss_pred             ----------------------CCCHHHHHHHHHHHHhhcccCcCCCCCHHHHHHHHccC
Q 045577          328 ----------------------PFSADELVKCIEVGLLCVQQRIEDWPTMSSVLTMLSNE  365 (392)
Q Consensus       328 ----------------------~~~~~~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~L~~~  365 (392)
                                            .........+.+++..|++.+|.+||++.+|++.|+..
T Consensus       245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~l~~~L~~l  304 (307)
T 2nru_A          245 DIKEEIEDEEKTIEDYIDKKMNDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEM  304 (307)
T ss_dssp             HHHHHHHTTSCCHHHHSCSSCSCCCHHHHHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHH
T ss_pred             HHHHHhhhhhhhhhhhccccccccchHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHH
Confidence                                  12234455678899999999999999999999999875

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*

Probab=99.87  E-value=1.5e-22  Score=191.37  Aligned_cols=177  Identities=20%  Similarity=0.224  Sum_probs=132.6

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhc-----------------------cccchhhhhHHHHHHHhhh
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFEC-----------------------SKYSSYVTNILYGIARVIL  241 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~-----------------------~~~~~~~~~i~~~ia~gL~  241 (392)
                      |++.++.......++..|++|||++++++.........                       ......+..++.|++.||.
T Consensus        85 hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~  164 (314)
T 2ivs_A           85 HPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQ  164 (314)
T ss_dssp             CTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHH
T ss_pred             CCceeeEEEEEecCCceEEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHH
Confidence            66666665555556789999999999998875544321                       1244457899999999999


Q ss_pred             hcCcCCCCceeecccccceeEEcCCCCCeEeeeeceEEeCCCCc-ceeceeeecccccCchhHH------HHHHHhcCCC
Q 045577          242 YLPEDSRLEIIHRDHKTSNVLLDAEINPNISDFGPARIFGDQTE-EVTGRVIGTQTLKTVPELL------QAWKLWSEGD  314 (392)
Q Consensus       242 yLH~~~~~~iiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~~-~~~~~~~gt~~y~a~~~~~------~~~diws~G~  314 (392)
                      |||++   +|+||||||+||+++.++.+||+|||+++....... .......+++.|+| ||..      .+.|+|+.|+
T Consensus       165 ~lH~~---~ivH~dikp~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~a-PE~~~~~~~~~~~Di~slG~  240 (314)
T 2ivs_A          165 YLAEM---KLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMA-IESLFDHIYTTQSDVWSFGV  240 (314)
T ss_dssp             HHHHT---TEECCCCSGGGEEEETTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCC-HHHHHHCEECHHHHHHHHHH
T ss_pred             HHHHC---CCcccccchheEEEcCCCCEEEccccccccccccccceeccCCCCcccccC-hhhhcCCCcCchhhHHHHHH
Confidence            99998   899999999999999999999999999988753222 22233457788999 7754      4789999998


Q ss_pred             cc-eeec-ccccCCCCCC----------------HHHHHHHHHHHHhhcccCcCCCCCHHHHHHHHccC
Q 045577          315 PM-EIID-EQTKMKGPFS----------------ADELVKCIEVGLLCVQQRIEDWPTMSSVLTMLSNE  365 (392)
Q Consensus       315 v~-~~ld-~~~~~~~~~~----------------~~~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~L~~~  365 (392)
                      ++ +++. +..++.+...                ......+.+++..|++.||++||++.++++.|+..
T Consensus       241 il~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~l~~~l~~~  309 (314)
T 2ivs_A          241 LLWEIVTLGGNPYPGIPPERLFNLLKTGHRMERPDNCSEEMYRLMLQCWKQEPDKRPVFADISKDLEKM  309 (314)
T ss_dssp             HHHHHHTTSCCSSTTCCGGGHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             HHHHHHhCCCCCCCCCCHHHHHHHhhcCCcCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence            77 4555 4333322211                11223566788899999999999999999999864

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}

Probab=99.87  E-value=3.4e-23  Score=201.17  Aligned_cols=177  Identities=22%  Similarity=0.182  Sum_probs=130.3

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhc------cccchhhhhHHHHHHHhhhhcCcCCCCceeeccccc
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFEC------SKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKT  258 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~------~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp  258 (392)
                      |++.++.......++..|+||||++++++.........      ......++.++.|+++||.|||+.   +|+||||||
T Consensus       133 hpnIv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp  209 (367)
T 3l9p_A          133 HQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAA  209 (367)
T ss_dssp             CTTBCCEEEEECSSSSCEEEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCG
T ss_pred             CCCCCeEEEEEecCCCCEEEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCh
Confidence            77777776665556778999999999999875544321      224445788999999999999998   899999999


Q ss_pred             ceeEEcCCC---CCeEeeeeceEEeC-CCCcceeceeeecccccCchhHH------HHHHHhcCCCcc-eeec-ccccCC
Q 045577          259 SNVLLDAEI---NPNISDFGPARIFG-DQTEEVTGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIID-EQTKMK  326 (392)
Q Consensus       259 ~NIll~~~~---~~kl~DFGla~~~~-~~~~~~~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld-~~~~~~  326 (392)
                      +|||++.++   .+||+|||+++... ...........||+.|+| ||..      .+.|+|++|+++ +++. +...+.
T Consensus       210 ~NIll~~~~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~a-PE~~~~~~~~~~~DvwslG~il~ellt~g~~pf~  288 (367)
T 3l9p_A          210 RNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMP-PEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYP  288 (367)
T ss_dssp             GGEEESCSSTTCCEEECCCHHHHHHHHHSSCTTCCGGGSCGGGCC-HHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSST
T ss_pred             hhEEEecCCCCceEEECCCccccccccccccccCCCcCCcccEEC-HHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCC
Confidence            999998554   59999999997543 111122223467889999 7755      478999999987 4554 433332


Q ss_pred             CCCCH----------------HHHHHHHHHHHhhcccCcCCCCCHHHHHHHHccC
Q 045577          327 GPFSA----------------DELVKCIEVGLLCVQQRIEDWPTMSSVLTMLSNE  365 (392)
Q Consensus       327 ~~~~~----------------~~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~L~~~  365 (392)
                      .....                .....+.+++..|++.+|++||++.+|++.|+..
T Consensus       289 ~~~~~~~~~~i~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~eil~~l~~~  343 (367)
T 3l9p_A          289 SKSNQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYC  343 (367)
T ss_dssp             TCCHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             CCCHHHHHHHHHcCCCCCCCccCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHH
Confidence            22111                1123466788899999999999999999999764

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7

Probab=99.87  E-value=1.4e-22  Score=193.31  Aligned_cols=171  Identities=15%  Similarity=0.136  Sum_probs=130.8

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEc
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLD  264 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~  264 (392)
                      |++.++........+..|++|||++++++............+..+..++.|++.||.|||+.   +|+||||||+||+++
T Consensus        60 hpnIv~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~---givH~Dlkp~NIl~~  136 (321)
T 1tki_A           60 HRNILHLHESFESMEELVMIFEFISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSH---NIGHFDIRPENIIYQ  136 (321)
T ss_dssp             CTTBCCEEEEEEETTEEEEEECCCCCCBHHHHHTSSSCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEES
T ss_pred             CCCCCeEeEEEecCCEEEEEEEeCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CCCcCCCCHHHEEEc
Confidence            55666655544445678999999999998776654433345566889999999999999998   899999999999998


Q ss_pred             C--CCCCeEeeeeceEEeCCCCcceeceeeecccccCchhHH------HHHHHhcCCCcc-eeecccccCCCCCCHHH--
Q 045577          265 A--EINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIIDEQTKMKGPFSADE--  333 (392)
Q Consensus       265 ~--~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld~~~~~~~~~~~~~--  333 (392)
                      .  ++.+||+|||+++......  ......||+.|+| ||+.      .+.|+|+.|+++ +++.+..++.+....+.  
T Consensus       137 ~~~~~~~kl~Dfg~a~~~~~~~--~~~~~~gt~~y~a-PE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~  213 (321)
T 1tki_A          137 TRRSSTIKIIEFGQARQLKPGD--NFRLLFTAPEYYA-PEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIE  213 (321)
T ss_dssp             SSSCCCEEECCCTTCEECCTTC--EEEEEESCGGGSC-HHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHH
T ss_pred             cCCCCCEEEEECCCCeECCCCC--ccccccCChhhcC-cHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcCCCHHHHHH
Confidence            7  7899999999998865322  2344679999999 7764      588999999877 55555444433222111  


Q ss_pred             -----------------HHHHHHHHHhhcccCcCCCCCHHHHHHH
Q 045577          334 -----------------LVKCIEVGLLCVQQRIEDWPTMSSVLTM  361 (392)
Q Consensus       334 -----------------~~~~~~i~~~Cl~~dp~~RPsm~eVv~~  361 (392)
                                       ...+.+++..|++.||++|||+.|+++.
T Consensus       214 ~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~Rpt~~e~l~h  258 (321)
T 1tki_A          214 NIMNAEYTFDEEAFKEISIEAMDFVDRLLVKERKSRMTASEALQH  258 (321)
T ss_dssp             HHHHTCCCCCHHHHTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred             HHHcCCCCCChhhhccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence                             2356678889999999999999999874

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7

Probab=99.87  E-value=1.6e-22  Score=197.07  Aligned_cols=180  Identities=18%  Similarity=0.174  Sum_probs=125.0

Q ss_pred             CCCccccccCcC-CCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEE
Q 045577          185 SGGCKRNWEADC-GDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLL  263 (392)
Q Consensus       185 s~GCvR~~~l~C-~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll  263 (392)
                      |++.++...... .++..|++|||++++++...............+..++.|+++||.|||+.   +|+||||||+||++
T Consensus       149 hpnIv~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll  225 (373)
T 3c1x_A          149 HPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASK---KFVHRDLAARNCML  225 (373)
T ss_dssp             CTTBCCCCEEECCCSSCCEEEEECCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEE
T ss_pred             CCCcceEEEEEEcCCCCeEEEEECCCCCCHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHHC---CEecCccchheEEE
Confidence            777777766532 34578999999999999876655444445556788999999999999998   89999999999999


Q ss_pred             cCCCCCeEeeeeceEEeCCCCc---ceeceeeecccccCchhHH------HHHHHhcCCCcc-eeec-ccccCCCCC---
Q 045577          264 DAEINPNISDFGPARIFGDQTE---EVTGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIID-EQTKMKGPF---  329 (392)
Q Consensus       264 ~~~~~~kl~DFGla~~~~~~~~---~~~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld-~~~~~~~~~---  329 (392)
                      +.++.+||+|||+++.......   .......+++.|+| ||..      .+.|+|+.|+++ +++. +.+.+....   
T Consensus       226 ~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~~~~~~y~a-PE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~~~~~  304 (373)
T 3c1x_A          226 DEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMA-LESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFD  304 (373)
T ss_dssp             CTTCCEEECCC---------------------CCGGGSC-HHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCSSC
T ss_pred             CCCCCEEEeeccccccccccccccccccCCCCCcccccC-hHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCCCHHH
Confidence            9999999999999986642211   11223457788999 7765      378999999877 4555 222222111   


Q ss_pred             -------------CHHHHHHHHHHHHhhcccCcCCCCCHHHHHHHHccCCCC
Q 045577          330 -------------SADELVKCIEVGLLCVQQRIEDWPTMSSVLTMLSNESIK  368 (392)
Q Consensus       330 -------------~~~~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~L~~~~~~  368 (392)
                                   +......+.+++..|++.+|++||++.++++.|+.....
T Consensus       305 ~~~~~~~~~~~~~p~~~~~~l~~li~~cl~~dp~~RPs~~ell~~L~~i~~~  356 (373)
T 3c1x_A          305 ITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFST  356 (373)
T ss_dssp             HHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred             HHHHHHcCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHh
Confidence                         111223567788899999999999999999999875333

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A

Probab=99.87  E-value=5.8e-23  Score=196.66  Aligned_cols=170  Identities=18%  Similarity=0.250  Sum_probs=129.4

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEc
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLD  264 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~  264 (392)
                      |++.++........+..|+||||++++++.....+... .....+..++.|++.||.|||+.   +|+||||||+||+++
T Consensus        73 hpnIv~l~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~-l~~~~~~~~~~qi~~al~~lH~~---~ivHrDlkp~NIll~  148 (328)
T 3fe3_A           73 HPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGR-MKEKEARSKFRQIVSAVQYCHQK---RIVHRDLKAENLLLD  148 (328)
T ss_dssp             CTTBCCEEEEEECSSEEEEEECCCTTCBHHHHHHHHCC-CCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEC
T ss_pred             CCCEeeEEEEEEECCEEEEEEECCCCCcHHHHHHHcCC-CCHHHHHHHHHHHHHHHHHHHHC---CEeccCCCHHHEEEc
Confidence            56666665554456779999999999998776544433 34455788999999999999998   899999999999999


Q ss_pred             CCCCCeEeeeeceEEeCCCCcceeceeeecccccCchhHH-------HHHHHhcCCCcc-eeecccccCCCCCCHHH---
Q 045577          265 AEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELL-------QAWKLWSEGDPM-EIIDEQTKMKGPFSADE---  333 (392)
Q Consensus       265 ~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~-------~~~diws~G~v~-~~ld~~~~~~~~~~~~~---  333 (392)
                      .++.+||+|||+++......  ......||+.|+| ||+.       .+.|+|+.|+++ +++.+..++.+....+.   
T Consensus       149 ~~~~~kl~DFG~a~~~~~~~--~~~~~~gt~~y~a-PE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~  225 (328)
T 3fe3_A          149 ADMNIKIADFGFSNEFTVGG--KLDAFCGAPPYAA-PELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRER  225 (328)
T ss_dssp             TTSCEEECSTTCCGGGSSSC--GGGTTSSSGGGCC-HHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHH
T ss_pred             CCCCEEEeeccCceecCCCC--ccccccCCcceeC-cccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCCCHHHHHHH
Confidence            99999999999987554222  2234579999999 7765       478999999977 56666544443321111   


Q ss_pred             ------------HHHHHHHHHhhcccCcCCCCCHHHHHHH
Q 045577          334 ------------LVKCIEVGLLCVQQRIEDWPTMSSVLTM  361 (392)
Q Consensus       334 ------------~~~~~~i~~~Cl~~dp~~RPsm~eVv~~  361 (392)
                                  ...+.+++..|++.||.+|||+.++++.
T Consensus       226 i~~~~~~~p~~~s~~~~~li~~~L~~dP~~R~t~~eil~h  265 (328)
T 3fe3_A          226 VLRGKYRIPFYMSTDCENLLKRFLVLNPIKRGTLEQIMKD  265 (328)
T ss_dssp             HHHCCCCCCTTSCHHHHHHHHHHCCSSTTTSCCHHHHTTC
T ss_pred             HHhCCCCCCCCCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence                        2345678889999999999999999864

>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*

Probab=99.87  E-value=7.4e-23  Score=191.98  Aligned_cols=167  Identities=12%  Similarity=0.076  Sum_probs=126.7

Q ss_pred             CCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEcCCCC-----CeEe
Q 045577          198 DGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEIN-----PNIS  272 (392)
Q Consensus       198 ~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~~~~~-----~kl~  272 (392)
                      +...+++|||+ ++++...............+..++.|++.||.|||+.   +|+||||||+||+++.++.     +||+
T Consensus        78 ~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~NIl~~~~~~~~~~~~kl~  153 (298)
T 1csn_A           78 GLHNVLVIDLL-GPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIHEK---SLVYRDIKPDNFLIGRPNSKNANMIYVV  153 (298)
T ss_dssp             TTEEEEEEECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEECCSSSTTTTCEEEC
T ss_pred             CceeEEEEEec-CCCHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEeccCCCCCCCeEEEE
Confidence            45689999999 7888775544333345566899999999999999998   8999999999999987766     9999


Q ss_pred             eeeceEEeCCCCc------ceeceeeecccccCchhHH------HHHHHhcCCCcc-eeecccccCCCCCC--HH-----
Q 045577          273 DFGPARIFGDQTE------EVTGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIIDEQTKMKGPFS--AD-----  332 (392)
Q Consensus       273 DFGla~~~~~~~~------~~~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld~~~~~~~~~~--~~-----  332 (392)
                      |||+++.......      .......||+.|+| ||..      .+.|+|+.|+++ +++.++.++.+...  ..     
T Consensus       154 Dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~a-PE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~  232 (298)
T 1csn_A          154 DFGMVKFYRDPVTKQHIPYREKKNLSGTARYMS-INTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYER  232 (298)
T ss_dssp             CCTTCEESBCTTTCCBCCCCCCCCCCSCTTTCC-HHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHH
T ss_pred             ECccccccccccccccccccCccCCCCCcccCC-chhhcCCCCChHHHHHHHHHHHHHHHcCCCCcchhhccccHHHHHH
Confidence            9999998753221      12334679999999 7764      478999999877 56666555443211  10     


Q ss_pred             ----------------HHHHHHHHHHhhcccCcCCCCCHHHHHHHHccCCCCC
Q 045577          333 ----------------ELVKCIEVGLLCVQQRIEDWPTMSSVLTMLSNESIKV  369 (392)
Q Consensus       333 ----------------~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~L~~~~~~~  369 (392)
                                      ....+.+++..|++.+|++||++.+|++.|+......
T Consensus       233 ~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~RP~~~~l~~~l~~~~~~~  285 (298)
T 1csn_A          233 IGEKKQSTPLRELCAGFPEEFYKYMHYARNLAFDATPDYDYLQGLFSKVLERL  285 (298)
T ss_dssp             HHHHHHHSCHHHHTTTSCHHHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHHT
T ss_pred             HHhhccCccHHHHHhhCcHHHHHHHHHHhcCCcccCCCHHHHHHHHHHHHHhc
Confidence                            1225667888999999999999999999998763333

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*

Probab=99.87  E-value=1.4e-22  Score=192.17  Aligned_cols=170  Identities=21%  Similarity=0.251  Sum_probs=125.5

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEc
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLD  264 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~  264 (392)
                      |++.++.......++..++||||+++ ++.....+.........+..++.|++.||.|||+.   +|+||||||+||+++
T Consensus        78 hp~iv~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~Dikp~NIl~~  153 (311)
T 3niz_A           78 HPNIVSLIDVIHSERCLTLVFEFMEK-DLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQH---RILHRDLKPQNLLIN  153 (311)
T ss_dssp             CTTBCCEEEEECCSSCEEEEEECCSE-EHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEC
T ss_pred             CCCEeeeeeEEccCCEEEEEEcCCCC-CHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCchHhEEEC
Confidence            66666666555556778999999995 44443333333345555788999999999999998   899999999999999


Q ss_pred             CCCCCeEeeeeceEEeCCCCcceeceeeecccccCchhHH-------HHHHHhcCCCcc-eeecccccCCCCCCHHHH--
Q 045577          265 AEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELL-------QAWKLWSEGDPM-EIIDEQTKMKGPFSADEL--  334 (392)
Q Consensus       265 ~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~-------~~~diws~G~v~-~~ld~~~~~~~~~~~~~~--  334 (392)
                      .++.+||+|||+++....... ......||+.|+| ||+.       .+.|+|+.|+++ +++.+...+.+....+..  
T Consensus       154 ~~~~~kl~Dfg~a~~~~~~~~-~~~~~~~t~~y~a-PE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~  231 (311)
T 3niz_A          154 SDGALKLADFGLARAFGIPVR-SYTHEVVTLWYRA-PDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPK  231 (311)
T ss_dssp             TTCCEEECCCTTCEETTSCCC----CCCCCCTTCC-HHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTTTHHHH
T ss_pred             CCCCEEEccCcCceecCCCcc-cccCCcccCCcCC-HHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCChHHHHHH
Confidence            999999999999988652222 2233578999999 7754       367999999976 555554444333222211  


Q ss_pred             -------------------------------------------HHHHHHHHhhcccCcCCCCCHHHHHH
Q 045577          335 -------------------------------------------VKCIEVGLLCVQQRIEDWPTMSSVLT  360 (392)
Q Consensus       335 -------------------------------------------~~~~~i~~~Cl~~dp~~RPsm~eVv~  360 (392)
                                                                 ..+.+++..|++.||++|||+.|+++
T Consensus       232 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~  300 (311)
T 3niz_A          232 IFSILGTPNPREWPQVQELPLWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMN  300 (311)
T ss_dssp             HHHHHCCCCTTTSGGGTTSHHHHSCCCCCCCCCCHHHHSTTCCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred             HHHHHCCCChHHhhhhhccchhhhcccccccCCcHHHhCcccCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence                                                       24557888999999999999999986

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}

Probab=99.86  E-value=1.1e-22  Score=192.96  Aligned_cols=191  Identities=17%  Similarity=0.125  Sum_probs=127.7

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEc
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLD  264 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~  264 (392)
                      |++.++........+..+++|||++++++.....+.........+..++.|++.||.|||+.   +++||||||+||+++
T Consensus        88 h~~iv~~~~~~~~~~~~~iv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~i~H~dlkp~NIl~~  164 (319)
T 2y4i_B           88 HENVVLFMGACMSPPHLAIITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLHAK---GILHKDLKSKNVFYD  164 (319)
T ss_dssp             CTTBCCCCEEEECSSCEEEECBCCCSEEHHHHTTSSCCCCCSHHHHHHHHHHHHHHHHHHHT---TCCCCCCCSTTEEEC
T ss_pred             CCCEeEEEEEEecCCceEEEeecccCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CccccCCChhhEEEe
Confidence            56666665555455679999999999988776554443445666899999999999999998   899999999999998


Q ss_pred             CCCCCeEeeeeceEEeCCC----CcceeceeeecccccCchhHH---------------HHHHHhcCCCcc-eeeccccc
Q 045577          265 AEINPNISDFGPARIFGDQ----TEEVTGRVIGTQTLKTVPELL---------------QAWKLWSEGDPM-EIIDEQTK  324 (392)
Q Consensus       265 ~~~~~kl~DFGla~~~~~~----~~~~~~~~~gt~~y~a~~~~~---------------~~~diws~G~v~-~~ld~~~~  324 (392)
                       ++.+||+|||+++.....    .........|++.|+| ||+.               .+.|+|+.|+++ +++.+..+
T Consensus       165 -~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~~g~~~y~a-PE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p  242 (319)
T 2y4i_B          165 -NGKVVITDFGLFSISGVLQAGRREDKLRIQNGWLCHLA-PEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWP  242 (319)
T ss_dssp             ---CCEECCCSCCC----------CCSCBCCSGGGGTSC-HHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCS
T ss_pred             -CCCEEEeecCCccccccccccccccccccCCCcccccC-hHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCC
Confidence             679999999998765311    1112223468999999 6654               378999999876 45555333


Q ss_pred             CCCCCCHH-----------------HHHHHHHHHHhhcccCcCCCCCHHHHHHHHccCCCCCCCCCCcccccC
Q 045577          325 MKGPFSAD-----------------ELVKCIEVGLLCVQQRIEDWPTMSSVLTMLSNESIKVPQPEEVCFATS  380 (392)
Q Consensus       325 ~~~~~~~~-----------------~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~L~~~~~~~~~p~~p~~~~~  380 (392)
                      +......+                 ....+.+++..|++.+|++||++.+++++|+...........|..+..
T Consensus       243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~l~~~~~~~~~~~~~~~  315 (319)
T 2y4i_B          243 FKTQPAEAIIWQMGTGMKPNLSQIGMGKEISDILLFCWAFEQEERPTFTKLMDMLEKLPKRNRRLSHPGHFWK  315 (319)
T ss_dssp             SSSCCHHHHHHHHHTTCCCCCCCSSCCTTHHHHHHHHHCSSTTTSCCHHHHHHHHTTC---------------
T ss_pred             CCCCCHHHHHHHhccCCCCCCCcCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHhhccCCCCccccc
Confidence            32221111                 112466788899999999999999999999988555555555555443

>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*

Probab=99.86  E-value=1.3e-22  Score=193.85  Aligned_cols=176  Identities=14%  Similarity=0.090  Sum_probs=130.4

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEc
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLD  264 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~  264 (392)
                      |++.++.......++..|++|||+ ++++...............+..++.|++.||.|||+.   +|+||||||+||+++
T Consensus        64 h~~i~~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~iiHrDlkp~Nill~  139 (330)
T 2izr_A           64 GDGIPQVYYFGPCGKYNAMVLELL-GPSLEDLFDLCDRTFSLKTVLMIAIQLISRMEYVHSK---NLIYRDVKPENFLIG  139 (330)
T ss_dssp             CTTSCCEEEEEEETTEEEEEEECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEC
T ss_pred             CCCCCEEEEEEecCCccEEEEEeC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeeec
Confidence            444444444333346689999999 7888765443323345566899999999999999998   899999999999999


Q ss_pred             CCCC-----CeEeeeeceEEeCCCCcc------eeceeeecccccCchhHH------HHHHHhcCCCcc-eeecccccCC
Q 045577          265 AEIN-----PNISDFGPARIFGDQTEE------VTGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIIDEQTKMK  326 (392)
Q Consensus       265 ~~~~-----~kl~DFGla~~~~~~~~~------~~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld~~~~~~  326 (392)
                      .++.     +||+|||+++.+......      ......||+.|+| ||+.      .+.|+|++|+++ +++.+..++.
T Consensus       140 ~~~~~~~~~~kl~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~a-PE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~  218 (330)
T 2izr_A          140 RPGNKTQQVIHIIDFALAKEYIDPETKKHIPYREHKSLTGTARYMS-INTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQ  218 (330)
T ss_dssp             CGGGTCTTSEEECCCTTCEESBCTTTCCBCCCCCCCCCCSCTTTCC-HHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTT
T ss_pred             cCCCCCCceEEEEEcccceeeecCCCCccccccccCCcCCCccccC-hHHHcCCCCCchhHHHHHHHHHHHHhcCCCCcc
Confidence            8876     999999999986532211      1234679999999 7765      478999999977 5666655554


Q ss_pred             CCCCH---HH-------------------HHHHHHHHHhhcccCcCCCCCHHHHHHHHccC
Q 045577          327 GPFSA---DE-------------------LVKCIEVGLLCVQQRIEDWPTMSSVLTMLSNE  365 (392)
Q Consensus       327 ~~~~~---~~-------------------~~~~~~i~~~Cl~~dp~~RPsm~eVv~~L~~~  365 (392)
                      +....   +.                   ...+.+++..|++.+|.+||++.+|++.|+..
T Consensus       219 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~p~~~~li~~~l~~~p~~RP~~~~l~~~l~~~  279 (330)
T 2izr_A          219 GLKADTLKERYQKIGDTKRATPIEVLCENFPEMATYLRYVRRLDFFEKPDYDYLRKLFTDL  279 (330)
T ss_dssp             TCCCSSHHHHHHHHHHHHHHSCHHHHTTTCHHHHHHHHHHHHCCTTCCCCHHHHHHHHHHH
T ss_pred             ccccccHHHHHHHHHhhhccCCHHHHhccChHHHHHHHHHHhCCCCCCCCHHHHHHHHHHH
Confidence            32111   00                   11567788899999999999999999998753

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}

Probab=99.86  E-value=2.2e-22  Score=192.26  Aligned_cols=163  Identities=20%  Similarity=0.176  Sum_probs=120.7

Q ss_pred             CeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCC------CCceeecccccceeEEcCCCCCeEee
Q 045577          200 EVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDS------RLEIIHRDHKTSNVLLDAEINPNISD  273 (392)
Q Consensus       200 ~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~------~~~iiHrDlKp~NIll~~~~~~kl~D  273 (392)
                      ..|++|||++++++........  .....+..++.|++.||.|||+.+      ..+|+||||||+||+++.++.+||+|
T Consensus        86 ~~~lv~e~~~~g~L~~~l~~~~--~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kL~D  163 (336)
T 3g2f_A           86 EYLLVMEYYPNGSLXKYLSLHT--SDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISD  163 (336)
T ss_dssp             EEEEEECCCTTCBHHHHHHHCC--BCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCCEECSSCSGGGEEECTTSCEEECC
T ss_pred             eEEEEEecCCCCcHHHHHhhcc--cchhHHHHHHHHHHHHHHHHHhhhccccccccceeecccccceEEEcCCCcEEEee
Confidence            4689999999999987654332  244457889999999999999862      33799999999999999999999999


Q ss_pred             eeceEEeCCCC-------cceeceeeecccccCchhHH-------------HHHHHhcCCCcc-eeecccccCCC-----
Q 045577          274 FGPARIFGDQT-------EEVTGRVIGTQTLKTVPELL-------------QAWKLWSEGDPM-EIIDEQTKMKG-----  327 (392)
Q Consensus       274 FGla~~~~~~~-------~~~~~~~~gt~~y~a~~~~~-------------~~~diws~G~v~-~~ld~~~~~~~-----  327 (392)
                      ||+++.+....       ........||+.|+| ||+.             .+.|+|+.|+++ +++.+...+..     
T Consensus       164 FG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~a-PE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~  242 (336)
T 3g2f_A          164 FGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMA-PEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGESVP  242 (336)
T ss_dssp             CTTCEECSSSSCC---------CCTTSCGGGCC-HHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGSTTSCCC
T ss_pred             ccceeecccccccCccccccccccCCCccceeC-chhhcCCcccccccccccccchHHHHHHHHHHHhcCCcCCCccchh
Confidence            99998865221       111223468999999 6654             357999999876 44433211110     


Q ss_pred             ------------------------------C------CCHHHHHHHHHHHHhhcccCcCCCCCHHHHHHHHccC
Q 045577          328 ------------------------------P------FSADELVKCIEVGLLCVQQRIEDWPTMSSVLTMLSNE  365 (392)
Q Consensus       328 ------------------------------~------~~~~~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~L~~~  365 (392)
                                                    .      ........+.+++..|++.||++|||+.++++.|+..
T Consensus       243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~e~l~~L~~l  316 (336)
T 3g2f_A          243 EYQMAFQTEVGNHPTFEDMQVLVSREKQRPKFPEAWKENSLAVRSLKETIEDCWDQDAEARLTAQXAEERMAEL  316 (336)
T ss_dssp             CCCCTTHHHHCSSCCHHHHHHHHTTSCCCCCCCTTCCCCSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHH
T ss_pred             HHHHhhhcccCCCchHHHHHhhhcccccCCCCCcccccccchHHHHHHHHHHHhcCChhhCcchHHHHHHHHHH
Confidence                                          0      0112334678888999999999999999999999875

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A

Probab=99.86  E-value=7.1e-23  Score=190.95  Aligned_cols=177  Identities=16%  Similarity=0.205  Sum_probs=130.4

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEc
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLD  264 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~  264 (392)
                      |++.++.......++..|++|||++++++...............+..++.|++.||.|||+.   +|+||||||+||+++
T Consensus        78 h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nili~  154 (283)
T 3gen_A           78 HEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESK---QFLHRDLAARNCLVN  154 (283)
T ss_dssp             CTTBCCEEEEECSSSSEEEEECCCTTCBHHHHHHCGGGCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCSGGGEEEC
T ss_pred             CCCEeeEEEEEecCCCeEEEEeccCCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCccceEEEc
Confidence            55555554444345678999999999998876655334445666899999999999999998   899999999999999


Q ss_pred             CCCCCeEeeeeceEEeCCCCcceeceeeecccccCchhHHH------HHHHhcCCCcc-eeec-ccccCCCCCCH-----
Q 045577          265 AEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELLQ------AWKLWSEGDPM-EIID-EQTKMKGPFSA-----  331 (392)
Q Consensus       265 ~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~~------~~diws~G~v~-~~ld-~~~~~~~~~~~-----  331 (392)
                      .++.+||+|||+++..............+|+.|+| ||...      +.|+|+.|+++ +++. +..++......     
T Consensus       155 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~a-PE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~~~~~~~~  233 (283)
T 3gen_A          155 DQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSP-PEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEH  233 (283)
T ss_dssp             TTSCEEECSTTGGGGBCCHHHHSTTSTTSCGGGCC-HHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHH
T ss_pred             CCCCEEEccccccccccccccccccCCccCcccCC-HHHhccCCCCchhhHHHHHHHHHHHHhCCCCCccccChhHHHHH
Confidence            99999999999987654222222222446778999 77653      78999999987 4554 43332221111     


Q ss_pred             -----------HHHHHHHHHHHhhcccCcCCCCCHHHHHHHHccC
Q 045577          332 -----------DELVKCIEVGLLCVQQRIEDWPTMSSVLTMLSNE  365 (392)
Q Consensus       332 -----------~~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~L~~~  365 (392)
                                 .....+.+++..|++.+|++||++.++++.|+..
T Consensus       234 ~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~~  278 (283)
T 3gen_A          234 IAQGLRLYRPHLASEKVYTIMYSCWHEKADERPTFKILLSNILDV  278 (283)
T ss_dssp             HHTTCCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHH
T ss_pred             HhcccCCCCCCcCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHH
Confidence                       1123466788899999999999999999999764

>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}

Probab=99.86  E-value=1.2e-22  Score=195.44  Aligned_cols=177  Identities=14%  Similarity=0.131  Sum_probs=129.7

Q ss_pred             CCCccccccCcCC----CCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccce
Q 045577          185 SGGCKRNWEADCG----DGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSN  260 (392)
Q Consensus       185 s~GCvR~~~l~C~----~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~N  260 (392)
                      |++.++.......    ++..|++|||+ ++++........ ......++.++.|++.||.|||+.   +|+||||||+|
T Consensus       107 h~ni~~~~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~-~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~N  181 (345)
T 2v62_A          107 YLGIPLFYGSGLTEFKGRSYRFMVMERL-GIDLQKISGQNG-TFKKSTVLQLGIRMLDVLEYIHEN---EYVHGDIKAAN  181 (345)
T ss_dssp             CCCCCCEEEEEEEESSSCEEEEEEEECE-EEEHHHHCBGGG-BCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGG
T ss_pred             ccCcceeecccccccCCCcEEEEEEecc-CCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCcCHHH
Confidence            4455544433221    45689999999 788876544433 334555899999999999999998   89999999999


Q ss_pred             eEEcCCC--CCeEeeeeceEEeCCCCc------ceeceeeecccccCchhHH------HHHHHhcCCCcc-eeecccccC
Q 045577          261 VLLDAEI--NPNISDFGPARIFGDQTE------EVTGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIIDEQTKM  325 (392)
Q Consensus       261 Ill~~~~--~~kl~DFGla~~~~~~~~------~~~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld~~~~~  325 (392)
                      |+++.++  .+||+|||+++.+.....      .......||+.|+| ||..      .+.|+|++|+++ +++.+..++
T Consensus       182 Ill~~~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~a-PE~~~~~~~~~~~Di~slG~il~ell~g~~pf  260 (345)
T 2v62_A          182 LLLGYKNPDQVYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTS-LDAHKGVALSRRSDVEILGYCMLRWLCGKLPW  260 (345)
T ss_dssp             EEEESSSTTSEEECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCC-HHHHHTCCCCHHHHHHHHHHHHHHHHHSSCTT
T ss_pred             EEEccCCCCcEEEEeCCCceecccccccccchhccccccCCCccccC-HHHhcCCCCCchhhHHHHHHHHHHHHhCCCCc
Confidence            9998877  999999999988752111      11133578999999 7765      478999999876 566664444


Q ss_pred             CCCC-CHH-------------------------HHHHHHHHHHhhcccCcCCCCCHHHHHHHHccCCC
Q 045577          326 KGPF-SAD-------------------------ELVKCIEVGLLCVQQRIEDWPTMSSVLTMLSNESI  367 (392)
Q Consensus       326 ~~~~-~~~-------------------------~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~L~~~~~  367 (392)
                      .... ...                         ....+.+++..|++.||++||++.+|++.|+....
T Consensus       261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~  328 (345)
T 2v62_A          261 EQNLKDPVAVQTAKTNLLDELPQSVLKWAPSGSSCCEIAQFLVCAHSLAYDEKPNYQALKKILNPHGI  328 (345)
T ss_dssp             GGGTTCHHHHHHHHHHHHHTTTHHHHHHSCTTSCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHCTTCC
T ss_pred             cccccccHHHHHHHHhhcccccHHHHhhccccccHHHHHHHHHHHhhcCcccCCCHHHHHHHHhccCC
Confidence            2211 111                         11256778889999999999999999999988633

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}

Probab=99.86  E-value=9.5e-23  Score=197.16  Aligned_cols=170  Identities=19%  Similarity=0.139  Sum_probs=123.6

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEc
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLD  264 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~  264 (392)
                      |++.++........+..|+||||++++++.....+... ..+..+..++.||+.||.|||+.   +|+||||||+|||++
T Consensus        83 hp~Iv~l~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~-~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NILl~  158 (353)
T 3txo_A           83 HPFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHIQKSRR-FDEARARFYAAEIISALMFLHDK---GIIYRDLKLDNVLLD  158 (353)
T ss_dssp             CTTBCCEEEEEECSSEEEEEEECCCSCBHHHHHHHHSS-CCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEEC
T ss_pred             CCceeeEEEEEEeCCEEEEEEeCCCCCcHHHHHHHcCC-CCHHHHHHHHHHHHHHHHHHHHC---CCcccCCCHHHEEEC
Confidence            55555555444445678999999999999776554433 34455788999999999999998   899999999999999


Q ss_pred             CCCCCeEeeeeceEEeCCCCcceeceeeecccccCchhHHH------HHHHhcCCCcc-eeecccccCCCCCCHHH----
Q 045577          265 AEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELLQ------AWKLWSEGDPM-EIIDEQTKMKGPFSADE----  333 (392)
Q Consensus       265 ~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~~------~~diws~G~v~-~~ld~~~~~~~~~~~~~----  333 (392)
                      .++.+||+|||+++.... ........+||+.|+| ||+..      +.|+|+.|+++ +++.+..++.+....+.    
T Consensus       159 ~~g~ikL~DFG~a~~~~~-~~~~~~~~~gt~~y~a-PE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~i  236 (353)
T 3txo_A          159 HEGHCKLADFGMCKEGIC-NGVTTATFCGTPDYIA-PEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAI  236 (353)
T ss_dssp             TTSCEEECCCTTCBCSCC----------CCGGGCC-HHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHH
T ss_pred             CCCCEEEccccceeeccc-CCccccccCCCcCeEC-hhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCCCCHHHHHHHH
Confidence            999999999999975331 1223344689999999 77653      67999999977 56666555544322221    


Q ss_pred             -----------HHHHHHHHHhhcccCcCCCCCH------HHHHH
Q 045577          334 -----------LVKCIEVGLLCVQQRIEDWPTM------SSVLT  360 (392)
Q Consensus       334 -----------~~~~~~i~~~Cl~~dp~~RPsm------~eVv~  360 (392)
                                 ...+.+++..|++.||.+||++      .++++
T Consensus       237 ~~~~~~~p~~~~~~~~~li~~lL~~dP~~R~~~~~~~~~~~il~  280 (353)
T 3txo_A          237 LNDEVVYPTWLHEDATGILKSFMTKNPTMRLGSLTQGGEHAILR  280 (353)
T ss_dssp             HHCCCCCCTTSCHHHHHHHHHHTCSSGGGSTTSGGGTCTHHHHT
T ss_pred             HcCCCCCCCCCCHHHHHHHHHHhhhCHHHccCCcccCCHHHHhh
Confidence                       1245568889999999999998      66664

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*

Probab=99.86  E-value=8.4e-23  Score=194.94  Aligned_cols=172  Identities=19%  Similarity=0.198  Sum_probs=128.3

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEc
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLD  264 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~  264 (392)
                      |++.++.......++..|++|||++++++......... .....+..++.|++.||.|||+.   +|+||||||+||+++
T Consensus        64 hpnIv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~-~~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~  139 (323)
T 3tki_A           64 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIG-MPEPDAQRFFHQLMAGVVYLHGI---GITHRDIKPENLLLD  139 (323)
T ss_dssp             CTTBCCEEEEEECSSEEEEEEECCTTEEGGGGSBTTTB-CCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEC
T ss_pred             CCCCCeEEEEEecCCeEEEEEEcCCCCcHHHHHhhcCC-CCHHHHHHHHHHHHHHHHHHHHC---CccccccchHHEEEe
Confidence            55555555444445678999999999888775543322 34555889999999999999998   899999999999999


Q ss_pred             CCCCCeEeeeeceEEeC-CCCcceeceeeecccccCchhHH-------HHHHHhcCCCcc-eeecccccCCCCCC-----
Q 045577          265 AEINPNISDFGPARIFG-DQTEEVTGRVIGTQTLKTVPELL-------QAWKLWSEGDPM-EIIDEQTKMKGPFS-----  330 (392)
Q Consensus       265 ~~~~~kl~DFGla~~~~-~~~~~~~~~~~gt~~y~a~~~~~-------~~~diws~G~v~-~~ld~~~~~~~~~~-----  330 (392)
                      .++.+||+|||+++.+. ...........||+.|+| ||+.       .+.|+|+.|+++ +++.+..++.....     
T Consensus       140 ~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~a-PE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~  218 (323)
T 3tki_A          140 ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVA-PELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEY  218 (323)
T ss_dssp             TTCCEEECCCTTCEECEETTEECCBCSCCSCGGGSC-HHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTTSHHH
T ss_pred             CCCCEEEEEeeccceeccCCcccccCCCccCcCccC-cHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCchHHHHH
Confidence            99999999999998764 222222334679999999 7654       468999999877 55555444432211     


Q ss_pred             -------------HHHHHHHHHHHHhhcccCcCCCCCHHHHHHH
Q 045577          331 -------------ADELVKCIEVGLLCVQQRIEDWPTMSSVLTM  361 (392)
Q Consensus       331 -------------~~~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~  361 (392)
                                   ......+.+++..|++.||++||++.|+++.
T Consensus       219 ~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eil~h  262 (323)
T 3tki_A          219 SDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARITIPDIKKD  262 (323)
T ss_dssp             HHHHTTCTTSTTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred             HHHhcccccCCccccCCHHHHHHHHHHccCChhhCcCHHHHhhC
Confidence                         1112355678889999999999999999865

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7

Probab=99.86  E-value=1.7e-22  Score=192.90  Aligned_cols=164  Identities=20%  Similarity=0.219  Sum_probs=122.8

Q ss_pred             CCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCC-----CCceeecccccceeEEcCCCCCeEee
Q 045577          199 GEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDS-----RLEIIHRDHKTSNVLLDAEINPNISD  273 (392)
Q Consensus       199 ~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~-----~~~iiHrDlKp~NIll~~~~~~kl~D  273 (392)
                      ...|++|||++++++.......  ......+..++.|++.||.|||+.+     ..+|+||||||+||+++.++.+||+|
T Consensus       108 ~~~~lv~e~~~~g~L~~~l~~~--~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kl~D  185 (337)
T 3mdy_A          108 TQLYLITDYHENGSLYDYLKST--TLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIAD  185 (337)
T ss_dssp             CEEEEEECCCTTCBHHHHHHHC--CBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCCGGGEEECTTSCEEECC
T ss_pred             CceEEEEeccCCCcHHHHhhcc--CCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecccchHHEEECCCCCEEEEe
Confidence            4689999999999998765432  2345557899999999999999852     34799999999999999999999999


Q ss_pred             eeceEEeCCCCcc---eeceeeecccccCchhHHH------------HHHHhcCCCcc-eeecc----------cccCCC
Q 045577          274 FGPARIFGDQTEE---VTGRVIGTQTLKTVPELLQ------------AWKLWSEGDPM-EIIDE----------QTKMKG  327 (392)
Q Consensus       274 FGla~~~~~~~~~---~~~~~~gt~~y~a~~~~~~------------~~diws~G~v~-~~ld~----------~~~~~~  327 (392)
                      ||+++.+......   ......||+.|+| ||...            +.|+|+.|+++ +++.+          ..++..
T Consensus       186 fg~a~~~~~~~~~~~~~~~~~~gt~~y~a-PE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~~~~~~~~~~~p~~~  264 (337)
T 3mdy_A          186 LGLAVKFISDTNEVDIPPNTRVGTKRYMP-PEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLPYHD  264 (337)
T ss_dssp             CTTCEECC---------CCSSCSCGGGCC-HHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTT
T ss_pred             CCCceeeccccccccCCCCCCccCcceeC-hhhcccccCCccccCccccchHHHHHHHHHHHhccCcccccccccccHhh
Confidence            9999876522211   1223579999999 77652            38999999876 44443          111111


Q ss_pred             ----------------------CCC-----HHHHHHHHHHHHhhcccCcCCCCCHHHHHHHHccC
Q 045577          328 ----------------------PFS-----ADELVKCIEVGLLCVQQRIEDWPTMSSVLTMLSNE  365 (392)
Q Consensus       328 ----------------------~~~-----~~~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~L~~~  365 (392)
                                            ..+     .+....+.+++..|++.||++||++.+|++.|+..
T Consensus       265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l  329 (337)
T 3mdy_A          265 LVPSDPSYEDMREIVCIKKLRPSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRVKKTLAKM  329 (337)
T ss_dssp             TSCSSCCHHHHHHHHTTSCCCCCCCGGGGGSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHH
T ss_pred             hcCCCCchhhhHHHHhhhccCccccccchhhHHHHHHHHHHHHhhhhChhhCCCHHHHHHHHHHH
Confidence                                  111     13445678899999999999999999999999875

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*

Probab=99.86  E-value=1.7e-22  Score=200.75  Aligned_cols=173  Identities=18%  Similarity=0.168  Sum_probs=130.5

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEc
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLD  264 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~  264 (392)
                      |++.++.......++..|+||||++++++.....+......+..+..++.|++.||.|||+.   +|+||||||+|||++
T Consensus       133 hp~Iv~l~~~~~~~~~~~lV~Ey~~gg~L~~~l~~~~~~l~e~~~~~~~~qi~~aL~~LH~~---giiHrDLKp~NILl~  209 (437)
T 4aw2_A          133 SKWITTLHYAFQDDNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVHQL---HYVHRDIKPDNILMD  209 (437)
T ss_dssp             TTTBCCEEEEEECSSEEEEEECCCTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEC
T ss_pred             CCCEEEEEEEEeeCCEEEEEEecCCCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHHhC---CeEecccCHHHeeEc
Confidence            55555554444445678999999999999886655333345566788999999999999998   899999999999999


Q ss_pred             CCCCCeEeeeeceEEeCCCCcceeceeeecccccCchhHHH-----------HHHHhcCCCcc-eeecccccCCCCCCHH
Q 045577          265 AEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELLQ-----------AWKLWSEGDPM-EIIDEQTKMKGPFSAD  332 (392)
Q Consensus       265 ~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~~-----------~~diws~G~v~-~~ld~~~~~~~~~~~~  332 (392)
                      .++.+||+|||+++..............||+.|+| ||+..           +.|+|+.|+++ +++.+.+++.+....+
T Consensus       210 ~~g~vkL~DFGla~~~~~~~~~~~~~~~GT~~Y~A-PE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~  288 (437)
T 4aw2_A          210 MNGHIRLADFGSCLKLMEDGTVQSSVAVGTPDYIS-PEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVE  288 (437)
T ss_dssp             TTSCEEECCCTTCEECCTTSCEECCSCCSCGGGCC-HHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHH
T ss_pred             CCCCEEEcchhhhhhcccCCCcccccccCCcCeeC-hHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCCChhH
Confidence            99999999999998876444444444689999999 77664           68999999976 5666655544332221


Q ss_pred             H--------------------HHHHHHHHHhhcccCcCC--CCCHHHHHHH
Q 045577          333 E--------------------LVKCIEVGLLCVQQRIED--WPTMSSVLTM  361 (392)
Q Consensus       333 ~--------------------~~~~~~i~~~Cl~~dp~~--RPsm~eVv~~  361 (392)
                      .                    ...+.+++..|++.+|++  ||+++++++.
T Consensus       289 ~~~~i~~~~~~~~~p~~~~~~s~~~~dLi~~lL~~~~~r~~r~~~~eil~H  339 (437)
T 4aw2_A          289 TYGKIMNHKERFQFPTQVTDVSENAKDLIRRLICSREHRLGQNGIEDFKKH  339 (437)
T ss_dssp             HHHHHHTHHHHCCCCSSCCCSCHHHHHHHHTTSSCGGGCTTTTTTHHHHTS
T ss_pred             HHHhhhhccccccCCcccccCCHHHHHHHHHHhcccccccCCCCHHHHhCC
Confidence            1                    123455677888887877  9999998864

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*

Probab=99.86  E-value=1.5e-22  Score=191.30  Aligned_cols=177  Identities=19%  Similarity=0.205  Sum_probs=133.1

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhc-----------------cccchhhhhHHHHHHHhhhhcCcCC
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFEC-----------------SKYSSYVTNILYGIARVILYLPEDS  247 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~-----------------~~~~~~~~~i~~~ia~gL~yLH~~~  247 (392)
                      |++.++.......++..+++|||++++++.........                 ......+..++.|++.||.|||+. 
T Consensus        86 h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~-  164 (313)
T 1t46_A           86 HMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASK-  164 (313)
T ss_dssp             CTTBCCEEEEECSSSSCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHT-
T ss_pred             CCCeeeEEEEEecCCCcEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHC-
Confidence            66777666655556778999999999998775443321                 134555789999999999999998 


Q ss_pred             CCceeecccccceeEEcCCCCCeEeeeeceEEeCCCC-cceeceeeecccccCchhHH------HHHHHhcCCCcc-eee
Q 045577          248 RLEIIHRDHKTSNVLLDAEINPNISDFGPARIFGDQT-EEVTGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EII  319 (392)
Q Consensus       248 ~~~iiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~-~~~~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~l  319 (392)
                        +++||||||+||+++.++.+||+|||+++...... ........+++.|+| ||..      .+.|+|+.|+++ +++
T Consensus       165 --~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~a-PE~~~~~~~~~~~Di~slG~il~ell  241 (313)
T 1t46_A          165 --NCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMA-PESIFNCVYTFESDVWSYGIFLWELF  241 (313)
T ss_dssp             --TCCCSCCSGGGEEEETTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCC-HHHHHHCCCCHHHHHHHHHHHHHHHH
T ss_pred             --CeecCCCccceEEEcCCCCEEEccccccccccccccceeccCCCCcceeeC-hHHhcCCCCChHHHHHHHHHHHHHHH
Confidence              89999999999999999999999999998765322 222334567889999 7755      478999999877 455


Q ss_pred             c-ccccCCCCCCH-----------------HHHHHHHHHHHhhcccCcCCCCCHHHHHHHHccC
Q 045577          320 D-EQTKMKGPFSA-----------------DELVKCIEVGLLCVQQRIEDWPTMSSVLTMLSNE  365 (392)
Q Consensus       320 d-~~~~~~~~~~~-----------------~~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~L~~~  365 (392)
                      . +..++.+....                 .....+.+++..|++.||.+||++.++++.|++.
T Consensus       242 t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~  305 (313)
T 1t46_A          242 SLGSSPYPGMPVDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQ  305 (313)
T ss_dssp             TTTCCSSTTCCSSHHHHHHHHHTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             hCCCCCCCcccchhHHHHHhccCCCCCCcccCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHH
Confidence            4 43333322211                 1123566788899999999999999999999865

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...

Probab=99.86  E-value=1.9e-22  Score=189.45  Aligned_cols=179  Identities=18%  Similarity=0.183  Sum_probs=131.3

Q ss_pred             CCCccccccCc-CCCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEE
Q 045577          185 SGGCKRNWEAD-CGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLL  263 (392)
Q Consensus       185 s~GCvR~~~l~-C~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll  263 (392)
                      |++.++..... ..++..|++|||++++++...............+..++.|++.||.|||+.   +++||||||+||++
T Consensus        85 h~~iv~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~ql~~~l~~lH~~---~i~H~dikp~Nil~  161 (298)
T 3f66_A           85 HPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASK---KFVHRDLAARNCML  161 (298)
T ss_dssp             CTTBCCCCEEECCSSSCCEEEEECCTTCBHHHHHHCTTCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEE
T ss_pred             CCCEeeeeeEEEcCCCceEEEEeCCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCchheEEE
Confidence            66777666542 234678999999999999876655444445566888999999999999998   89999999999999


Q ss_pred             cCCCCCeEeeeeceEEeCCCCc---ceeceeeecccccCchhHH------HHHHHhcCCCcc-eeec-ccccCCCCCC--
Q 045577          264 DAEINPNISDFGPARIFGDQTE---EVTGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIID-EQTKMKGPFS--  330 (392)
Q Consensus       264 ~~~~~~kl~DFGla~~~~~~~~---~~~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld-~~~~~~~~~~--  330 (392)
                      +.++.+||+|||+++.......   .......+|+.|+| ||..      .+.|+|+.|+++ +++. +.+.+.....  
T Consensus       162 ~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~y~a-PE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~~  240 (298)
T 3f66_A          162 DEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA-LESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFD  240 (298)
T ss_dssp             CTTCCEEECSCGGGCCCSCGGGCBC-----CCBCGGGSC-HHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTSCTTT
T ss_pred             CCCCCEEECcccccccccccchhccccccCCCCCccccC-hHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCccCCHHH
Confidence            9999999999999986642221   12223467788999 7755      378999999877 4455 2222211111  


Q ss_pred             --------------HHHHHHHHHHHHhhcccCcCCCCCHHHHHHHHccCCC
Q 045577          331 --------------ADELVKCIEVGLLCVQQRIEDWPTMSSVLTMLSNESI  367 (392)
Q Consensus       331 --------------~~~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~L~~~~~  367 (392)
                                    ......+.+++..|++.+|++||++.++++.|+....
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~  291 (298)
T 3f66_A          241 ITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFS  291 (298)
T ss_dssp             HHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             HHHHHhcCCCCCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence                          1112346678889999999999999999999987633

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*

Probab=99.86  E-value=1.4e-22  Score=189.42  Aligned_cols=172  Identities=17%  Similarity=0.180  Sum_probs=129.2

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEc
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLD  264 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~  264 (392)
                      |++.++.......++..|++|||++++++.....+.........+..++.|++.||.|||+.   +|+||||||+||+++
T Consensus        71 h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~  147 (289)
T 4fvq_A           71 HKHLVLNYGVCVCGDENILVQEFVKFGSLDTYLKKNKNCINILWKLEVAKQLAAAMHFLEEN---TLIHGNVCAKNILLI  147 (289)
T ss_dssp             CTTBCCEEEEECCTTCCEEEEECCTTCBHHHHHHHTGGGCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEE
T ss_pred             CCCEeEEEEEEEeCCCCEEEEECCCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHhhC---CeECCCcCcceEEEe
Confidence            55666555554445678999999999999876655444345556789999999999999998   899999999999999


Q ss_pred             CCCC--------CeEeeeeceEEeCCCCcceeceeeecccccCchhHH-------HHHHHhcCCCcc-eeecccccCCCC
Q 045577          265 AEIN--------PNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELL-------QAWKLWSEGDPM-EIIDEQTKMKGP  328 (392)
Q Consensus       265 ~~~~--------~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~-------~~~diws~G~v~-~~ld~~~~~~~~  328 (392)
                      .++.        +||+|||++.....     .....|+..|+| ||..       .+.|+|+.|+++ +++.+...+...
T Consensus       148 ~~~~~~~~~~~~~kl~Dfg~~~~~~~-----~~~~~~~~~y~a-PE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~  221 (289)
T 4fvq_A          148 REEDRKTGNPPFIKLSDPGISITVLP-----KDILQERIPWVP-PECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSA  221 (289)
T ss_dssp             ECCBGGGTBCCEEEECCCCSCTTTSC-----HHHHHHTTTTSC-HHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTT
T ss_pred             cCCcccccccceeeeccCcccccccC-----ccccCCcCcccC-HHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCccc
Confidence            8887        89999998754321     122457889999 7655       368999999876 555533222222


Q ss_pred             CCHHHHH---------------HHHHHHHhhcccCcCCCCCHHHHHHHHccC
Q 045577          329 FSADELV---------------KCIEVGLLCVQQRIEDWPTMSSVLTMLSNE  365 (392)
Q Consensus       329 ~~~~~~~---------------~~~~i~~~Cl~~dp~~RPsm~eVv~~L~~~  365 (392)
                      .......               .+.+++..|++.||++||++.++++.|+..
T Consensus       222 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~l  273 (289)
T 4fvq_A          222 LDSQRKLQFYEDRHQLPAPKAAELANLINNCMDYEPDHRPSFRAIIRDLNSL  273 (289)
T ss_dssp             SCHHHHHHHHHTTCCCCCCSSCTTHHHHHHHSCSSGGGSCCHHHHHHHHHTC
T ss_pred             cchHHHHHHhhccCCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHh
Confidence            2222211               355688899999999999999999999987

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}

Probab=99.86  E-value=5.8e-23  Score=194.82  Aligned_cols=169  Identities=20%  Similarity=0.177  Sum_probs=123.4

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEc
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLD  264 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~  264 (392)
                      |+++++.......++..|+||||+. +++............+..+..++.|++.||.|||+.   +|+||||||+||+++
T Consensus       116 h~~iv~l~~~~~~~~~~~lv~e~~~-~~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIll~  191 (311)
T 3p1a_A          116 HPCCVRLEQAWEEGGILYLQTELCG-PSLQQHCEAWGASLPEAQVWGYLRDTLLALAHLHSQ---GLVHLDVKPANIFLG  191 (311)
T ss_dssp             CTTBCCEEEEEEETTEEEEEEECCC-CBHHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEC
T ss_pred             CCcEEEEEEEEEeCCEEEEEEeccC-CCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEEC
Confidence            7777776665545677999999995 455544333333345666889999999999999998   899999999999999


Q ss_pred             CCCCCeEeeeeceEEeCCCCcceeceeeecccccCchhHH-----HHHHHhcCCCcc-eeecccccCCCC----------
Q 045577          265 AEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELL-----QAWKLWSEGDPM-EIIDEQTKMKGP----------  328 (392)
Q Consensus       265 ~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~-----~~~diws~G~v~-~~ld~~~~~~~~----------  328 (392)
                      .++.+||+|||+++......  ......||+.|+| ||+.     .+.|+|+.|+++ +++.+...+.+.          
T Consensus       192 ~~~~~kl~DFG~a~~~~~~~--~~~~~~gt~~y~a-PE~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~~~~~~  268 (311)
T 3p1a_A          192 PRGRCKLGDFGLLVELGTAG--AGEVQEGDPRYMA-PELLQGSYGTAADVFSLGLTILEVACNMELPHGGEGWQQLRQGY  268 (311)
T ss_dssp             GGGCEEECCCTTCEECC--------CCCCCGGGCC-GGGGGTCCSTHHHHHHHHHHHHHHHHTCCCCSSHHHHHHHTTTC
T ss_pred             CCCCEEEccceeeeecccCC--CCcccCCCccccC-HhHhcCCCCchhhHHHHHHHHHHHHhCCCCCCCccHHHHHhccC
Confidence            99999999999998765322  2233568999999 6654     378999999976 555442222111          


Q ss_pred             CCH----HHHHHHHHHHHhhcccCcCCCCCHHHHHH
Q 045577          329 FSA----DELVKCIEVGLLCVQQRIEDWPTMSSVLT  360 (392)
Q Consensus       329 ~~~----~~~~~~~~i~~~Cl~~dp~~RPsm~eVv~  360 (392)
                      ...    .....+.+++..|++.||++||++.++++
T Consensus       269 ~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~  304 (311)
T 3p1a_A          269 LPPEFTAGLSSELRSVLVMMLEPDPKLRATAEALLA  304 (311)
T ss_dssp             CCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred             CCcccccCCCHHHHHHHHHHcCCChhhCcCHHHHHh
Confidence            111    11235677888999999999999999986

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=99.86  E-value=1.5e-22  Score=193.90  Aligned_cols=177  Identities=21%  Similarity=0.247  Sum_probs=126.0

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEc
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLD  264 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~  264 (392)
                      |++.++........+..+++|||++++++.....+.........+..++.|++.||.|||+.   +|+||||||+||+++
T Consensus       105 h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~  181 (333)
T 1mqb_A          105 HHNIIRLEGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANM---NYVHRDLAARNILVN  181 (333)
T ss_dssp             CTTBCCEEEEECSSSSEEEEEECCTTEEHHHHHHHTTTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEC
T ss_pred             CCCCCcEEEEEecCCCcEEEEeCCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChheEEEC
Confidence            56666665554445778999999999998876554433345556889999999999999998   899999999999999


Q ss_pred             CCCCCeEeeeeceEEeCCCCc--ceeceeeecccccCchhHH------HHHHHhcCCCcc-eeec-ccccCCCCC-----
Q 045577          265 AEINPNISDFGPARIFGDQTE--EVTGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIID-EQTKMKGPF-----  329 (392)
Q Consensus       265 ~~~~~kl~DFGla~~~~~~~~--~~~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld-~~~~~~~~~-----  329 (392)
                      .++.+||+|||+++.......  .......++..|+| ||..      .+.|+|+.|+++ +++. +..++....     
T Consensus       182 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~a-PE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~~~~  260 (333)
T 1mqb_A          182 SNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTA-PEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVM  260 (333)
T ss_dssp             TTCCEEECCCCC-----------------CCCGGGSC-HHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHH
T ss_pred             CCCcEEECCCCcchhhccccccccccCCCCccccccC-chhcccCCCCchhhhHHHHHHHHHHHcCCCCCcccCCHHHHH
Confidence            999999999999987652211  11222346778999 7765      378999999877 4555 433332211     


Q ss_pred             -----------CHHHHHHHHHHHHhhcccCcCCCCCHHHHHHHHccC
Q 045577          330 -----------SADELVKCIEVGLLCVQQRIEDWPTMSSVLTMLSNE  365 (392)
Q Consensus       330 -----------~~~~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~L~~~  365 (392)
                                 +......+.+++..|++.+|++||++.++++.|+..
T Consensus       261 ~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~  307 (333)
T 1mqb_A          261 KAINDGFRLPTPMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKL  307 (333)
T ss_dssp             HHHHTTCCCCCCTTCBHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHH
T ss_pred             HHHHCCCcCCCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence                       111223566788899999999999999999999764

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7

Probab=99.86  E-value=1.1e-22  Score=194.67  Aligned_cols=177  Identities=20%  Similarity=0.239  Sum_probs=130.9

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhh-----------------------ccccchhhhhHHHHHHHhhh
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFE-----------------------CSKYSSYVTNILYGIARVIL  241 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~-----------------------~~~~~~~~~~i~~~ia~gL~  241 (392)
                      |++.++.......++..|++|||++++++........                       .......++.++.|++.||.
T Consensus       109 hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~  188 (343)
T 1luf_A          109 NPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMA  188 (343)
T ss_dssp             CTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEEEEEccCCceEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHH
Confidence            6676666655545677899999999999887554321                       12244457889999999999


Q ss_pred             hcCcCCCCceeecccccceeEEcCCCCCeEeeeeceEEeCCCC-cceeceeeecccccCchhHH------HHHHHhcCCC
Q 045577          242 YLPEDSRLEIIHRDHKTSNVLLDAEINPNISDFGPARIFGDQT-EEVTGRVIGTQTLKTVPELL------QAWKLWSEGD  314 (392)
Q Consensus       242 yLH~~~~~~iiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~-~~~~~~~~gt~~y~a~~~~~------~~~diws~G~  314 (392)
                      |||+.   +|+||||||+||+++.++.+||+|||+++...... ........+|+.|+| ||..      .+.|+|+.|+
T Consensus       189 ~LH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~a-PE~~~~~~~~~~~Di~slG~  264 (343)
T 1luf_A          189 YLSER---KFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMP-PESIFYNRYTTESDVWAYGV  264 (343)
T ss_dssp             HHHHT---TCCCSCCSGGGEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCC-HHHHHHCCCCHHHHHHHHHH
T ss_pred             HHHhC---CeecCCCCcceEEECCCCeEEEeecCCCcccccCccccccCCCcccceecC-hhhhccCCcCcccccHHHHH
Confidence            99998   89999999999999999999999999987654211 122233567889999 7765      3789999998


Q ss_pred             cc-eeec-ccccCCCCCC----------------HHHHHHHHHHHHhhcccCcCCCCCHHHHHHHHccC
Q 045577          315 PM-EIID-EQTKMKGPFS----------------ADELVKCIEVGLLCVQQRIEDWPTMSSVLTMLSNE  365 (392)
Q Consensus       315 v~-~~ld-~~~~~~~~~~----------------~~~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~L~~~  365 (392)
                      ++ +++. +..++.+...                ......+.+++..|++.+|++||++.+|++.|+..
T Consensus       265 il~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~~~~~L~~~  333 (343)
T 1luf_A          265 VLWEIFSYGLQPYYGMAHEEVIYYVRDGNILACPENCPLELYNLMRLCWSKLPADRPSFCSIHRILQRM  333 (343)
T ss_dssp             HHHHHHTTTCCTTTTSCHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHT
T ss_pred             HHHHHHhcCCCcCCCCChHHHHHHHhCCCcCCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHHHHH
Confidence            77 4554 4333322111                11123566788899999999999999999999987

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*

Probab=99.86  E-value=1.3e-22  Score=193.82  Aligned_cols=177  Identities=20%  Similarity=0.214  Sum_probs=132.3

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhc-------------cccchhhhhHHHHHHHhhhhcCcCCCCce
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFEC-------------SKYSSYVTNILYGIARVILYLPEDSRLEI  251 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~-------------~~~~~~~~~i~~~ia~gL~yLH~~~~~~i  251 (392)
                      |++.++.......++..|++|||++++++.........             ......+..++.|++.||.|||+.   +|
T Consensus       109 h~~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i  185 (333)
T 2i1m_A          109 HENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASK---NC  185 (333)
T ss_dssp             CTTBCCEEEEECSSSSCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHHT---TE
T ss_pred             CCCeeeEEEEEecCCceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhcC---Cc
Confidence            66666666555556789999999999998775443321             124455788999999999999998   89


Q ss_pred             eecccccceeEEcCCCCCeEeeeeceEEeCCC-CcceeceeeecccccCchhHH------HHHHHhcCCCcc-eeec-cc
Q 045577          252 IHRDHKTSNVLLDAEINPNISDFGPARIFGDQ-TEEVTGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIID-EQ  322 (392)
Q Consensus       252 iHrDlKp~NIll~~~~~~kl~DFGla~~~~~~-~~~~~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld-~~  322 (392)
                      +||||||+||+++.++.+||+|||+++..... .........+++.|+| ||..      .+.|+|+.|+++ +++. +.
T Consensus       186 vH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~a-PE~~~~~~~~~~~Di~slG~il~el~t~g~  264 (333)
T 2i1m_A          186 IHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMA-PESIFDCVYTVQSDVWSYGILLWEIFSLGL  264 (333)
T ss_dssp             ECSCCSGGGCEEEGGGEEEBCCCGGGCCGGGCTTSEECSSCEECGGGSC-HHHHHHCCCCHHHHHHHHHHHHHHHTTTSC
T ss_pred             ccCCcccceEEECCCCeEEECccccccccccccceeecCCCCCCccccC-HHHhccCCCChHHHHHHHHHHHHHHHcCCC
Confidence            99999999999999999999999999865422 2222334567889999 7754      478999999987 4554 43


Q ss_pred             ccCCCCCCHH-----------------HHHHHHHHHHhhcccCcCCCCCHHHHHHHHccC
Q 045577          323 TKMKGPFSAD-----------------ELVKCIEVGLLCVQQRIEDWPTMSSVLTMLSNE  365 (392)
Q Consensus       323 ~~~~~~~~~~-----------------~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~L~~~  365 (392)
                      .++.+.....                 ....+.+++..|++.||++||++.+|++.|+..
T Consensus       265 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~  324 (333)
T 2i1m_A          265 NPYPGILVNSKFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQEQ  324 (333)
T ss_dssp             CSSTTCCSSHHHHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             CCCcccchhHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHhccChhhCcCHHHHHHHHHHH
Confidence            3333222111                 123566788899999999999999999999764

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}

Probab=99.86  E-value=1.8e-22  Score=191.92  Aligned_cols=177  Identities=18%  Similarity=0.180  Sum_probs=121.8

Q ss_pred             CCCccccccCcCCCCC------eeEEecCccCCCcChhhhhhhc-----cccchhhhhHHHHHHHhhhhcCcCCCCceee
Q 045577          185 SGGCKRNWEADCGDGE------VFLMFEGIKLPDKSEFTCEFEC-----SKYSSYVTNILYGIARVILYLPEDSRLEIIH  253 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~------~~lv~e~~~~~~l~~~~~~~~~-----~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiH  253 (392)
                      |++.++..........      .+++|||++++++.........     ......+..++.|++.||.|||+.   +|+|
T Consensus        84 h~~iv~~~~~~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~---~ivH  160 (323)
T 3qup_A           84 HPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSR---NFIH  160 (323)
T ss_dssp             CTTBCCCCEEEECC-------CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHT---TCCC
T ss_pred             CCceehhhceeeccccccCCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHcC---Cccc
Confidence            5666665544322222      3999999999998875433221     234455789999999999999998   8999


Q ss_pred             cccccceeEEcCCCCCeEeeeeceEEeCCCC-cceeceeeecccccCchhHH------HHHHHhcCCCcc-eeec-cccc
Q 045577          254 RDHKTSNVLLDAEINPNISDFGPARIFGDQT-EEVTGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIID-EQTK  324 (392)
Q Consensus       254 rDlKp~NIll~~~~~~kl~DFGla~~~~~~~-~~~~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld-~~~~  324 (392)
                      |||||+||+++.++.+||+|||+++...... ........+++.|+| ||..      .+.|+|+.|+++ +++. +...
T Consensus       161 ~Dikp~NIli~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~a-PE~~~~~~~~~~~Di~slG~il~ell~~g~~p  239 (323)
T 3qup_A          161 RDLAARNCMLAEDMTVCVADFGLSRKIYSGDYYRQGCASKLPVKWLA-LESLADNLYTVHSDVWAFGVTMWEIMTRGQTP  239 (323)
T ss_dssp             SCCSGGGEEECTTSCEEECCCCC-----------------CCGGGCC-HHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCT
T ss_pred             CCCCcceEEEcCCCCEEEeeccccccccccccccccccccCcccccC-chhhcCCCCCCccchhhHHHHHHHHHhCCCCC
Confidence            9999999999999999999999998764222 122223456788999 6654      478999999977 4555 4333


Q ss_pred             CCCCC----------------CHHHHHHHHHHHHhhcccCcCCCCCHHHHHHHHccC
Q 045577          325 MKGPF----------------SADELVKCIEVGLLCVQQRIEDWPTMSSVLTMLSNE  365 (392)
Q Consensus       325 ~~~~~----------------~~~~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~L~~~  365 (392)
                      +.+..                +......+.+++..|++.||++||++.++++.|++.
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~  296 (323)
T 3qup_A          240 YAGIENAEIYNYLIGGNRLKQPPECMEEVYDLMYQCWSADPKQRPSFTCLRMELENI  296 (323)
T ss_dssp             TTTCCGGGHHHHHHTTCCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHH
T ss_pred             ccccChHHHHHHHhcCCCCCCCCccCHHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence            32211                112224567788899999999999999999999875

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*

Probab=99.86  E-value=1.6e-22  Score=188.58  Aligned_cols=176  Identities=15%  Similarity=0.125  Sum_probs=127.7

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEc
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLD  264 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~  264 (392)
                      |++.++.... +.++..|++|||++++++.....+.........+..++.|++.||.|||+.   +++||||||+||+++
T Consensus        72 h~~i~~~~~~-~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~  147 (281)
T 3cc6_A           72 HPHIVKLIGI-IEEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLESI---NCVHRDIAVRNILVA  147 (281)
T ss_dssp             CTTBCCEEEE-ECSSSCEEEEECCTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEEE
T ss_pred             CCCcceEEEE-EcCCCCEEEEecCCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCccceEEEC
Confidence            5555555443 335678999999999998876554443345555788999999999999998   899999999999999


Q ss_pred             CCCCCeEeeeeceEEeCCCCcceeceeeecccccCchhHHH------HHHHhcCCCcc-eeec-ccccCCCCCC------
Q 045577          265 AEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELLQ------AWKLWSEGDPM-EIID-EQTKMKGPFS------  330 (392)
Q Consensus       265 ~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~~------~~diws~G~v~-~~ld-~~~~~~~~~~------  330 (392)
                      .++.+||+|||+++..............+++.|+| ||...      +.|+|+.|+++ +++. +..++.....      
T Consensus       148 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~a-PE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~~~~~~~~~~  226 (281)
T 3cc6_A          148 SPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMS-PESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVIGV  226 (281)
T ss_dssp             ETTEEEECCCCGGGCC---------CCCCCGGGCC-HHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCGGGHHHH
T ss_pred             CCCcEEeCccCCCcccccccccccccCCCCcceeC-chhhccCCCCchhccHHHHHHHHHHHhCCCCCcccCChHHHHHH
Confidence            99999999999987654322222333457888999 77653      68999999877 4554 4333321111      


Q ss_pred             ----------HHHHHHHHHHHHhhcccCcCCCCCHHHHHHHHccC
Q 045577          331 ----------ADELVKCIEVGLLCVQQRIEDWPTMSSVLTMLSNE  365 (392)
Q Consensus       331 ----------~~~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~L~~~  365 (392)
                                ......+.+++..|++.+|++||++.++++.|+..
T Consensus       227 ~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~  271 (281)
T 3cc6_A          227 LEKGDRLPKPDLCPPVLYTLMTRCWDYDPSDRPRFTELVCSLSDV  271 (281)
T ss_dssp             HHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             HhcCCCCCCCCCCCHHHHHHHHHHccCCchhCcCHHHHHHHHHHH
Confidence                      11123466788899999999999999999999764

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*

Probab=99.86  E-value=1.7e-22  Score=192.74  Aligned_cols=177  Identities=21%  Similarity=0.218  Sum_probs=130.2

Q ss_pred             CCCccccccCcC--CCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeE
Q 045577          185 SGGCKRNWEADC--GDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVL  262 (392)
Q Consensus       185 s~GCvR~~~l~C--~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIl  262 (392)
                      |++.++......  ..+..|++|||++++++...............+..++.|++.||.|||+.   +|+||||||+||+
T Consensus        83 h~~i~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dikp~NIl  159 (327)
T 3lxl_A           83 SDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSR---RCVHRDLAARNIL  159 (327)
T ss_dssp             CTTBCCEEEEEECSSSCEEEEEEECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEE
T ss_pred             CCceeEEEEEEecCCCceEEEEEeecCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCChhhEE
Confidence            555555444322  23458999999999999876554333345566889999999999999998   8999999999999


Q ss_pred             EcCCCCCeEeeeeceEEeCCCCcc--eeceeeecccccCchhHH------HHHHHhcCCCcc-eeecccccCCC------
Q 045577          263 LDAEINPNISDFGPARIFGDQTEE--VTGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIIDEQTKMKG------  327 (392)
Q Consensus       263 l~~~~~~kl~DFGla~~~~~~~~~--~~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld~~~~~~~------  327 (392)
                      ++.++.+||+|||+++........  ......|+..|+| ||..      .+.|+|+.|+++ +++.+...+..      
T Consensus       160 ~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~a-PE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~  238 (327)
T 3lxl_A          160 VESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYA-PESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFL  238 (327)
T ss_dssp             EEETTEEEECCGGGCEECCTTCSEEECSSCCCSCGGGSC-HHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHH
T ss_pred             ECCCCCEEEcccccceecccCCccceeeccCCccccccC-HHHhccCCCChHHhHHHHHHHHHHHHhCCCCCccccchhh
Confidence            999999999999999987532221  2233567888999 7755      378999999876 44443222110      


Q ss_pred             -------------------------CCCHHHHHHHHHHHHhhcccCcCCCCCHHHHHHHHccC
Q 045577          328 -------------------------PFSADELVKCIEVGLLCVQQRIEDWPTMSSVLTMLSNE  365 (392)
Q Consensus       328 -------------------------~~~~~~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~L~~~  365 (392)
                                               ..+......+.+++..|++.||++||++.++++.|+..
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~  301 (327)
T 3lxl_A          239 RMMGCERDVPALSRLLELLEEGQRLPAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQLDML  301 (327)
T ss_dssp             HHCC----CCHHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHC
T ss_pred             hhcccccccccHHHHHHHhhcccCCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence                                     01111223567788899999999999999999999876

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}

Probab=99.86  E-value=3e-22  Score=197.51  Aligned_cols=172  Identities=19%  Similarity=0.120  Sum_probs=128.9

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEc
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLD  264 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~  264 (392)
                      |+++++........+..|+||||++++++.....+......+..+..++.||+.||.|||+.   +|+||||||+|||++
T Consensus       120 hp~Iv~l~~~~~~~~~~~lVmE~~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---giiHrDLKp~NILld  196 (412)
T 2vd5_A          120 RRWITQLHFAFQDENYLYLVMEYYVGGDLLTLLSKFGERIPAEMARFYLAEIVMAIDSVHRL---GYVHRDIKPDNILLD  196 (412)
T ss_dssp             TTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHHHSSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEC
T ss_pred             CCCeeeEEEEEeeCCEEEEEEcCCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecccCHHHeeec
Confidence            55555554444445678999999999999886655433345556788999999999999998   899999999999999


Q ss_pred             CCCCCeEeeeeceEEeCCCCcceeceeeecccccCchhHHH-------------HHHHhcCCCcc-eeecccccCCCCCC
Q 045577          265 AEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELLQ-------------AWKLWSEGDPM-EIIDEQTKMKGPFS  330 (392)
Q Consensus       265 ~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~~-------------~~diws~G~v~-~~ld~~~~~~~~~~  330 (392)
                      .++.+||+|||+++..............||+.|+| ||+..             +.|+|+.|+++ +++.++.++.+...
T Consensus       197 ~~g~vkL~DFGla~~~~~~~~~~~~~~~Gt~~Y~A-PE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~  275 (412)
T 2vd5_A          197 RCGHIRLADFGSCLKLRADGTVRSLVAVGTPDYLS-PEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADST  275 (412)
T ss_dssp             TTSCEEECCCTTCEECCTTSCEECSSCCSCGGGCC-HHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCSSH
T ss_pred             CCCCEEEeechhheeccCCCccccceeccccCcCC-HHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCCCH
Confidence            99999999999999876433333344689999999 77654             57999999976 56666555443322


Q ss_pred             HHH--------------------HHHHHHHHHhhcccCcCCC---CCHHHHHHH
Q 045577          331 ADE--------------------LVKCIEVGLLCVQQRIEDW---PTMSSVLTM  361 (392)
Q Consensus       331 ~~~--------------------~~~~~~i~~~Cl~~dp~~R---Psm~eVv~~  361 (392)
                      .+.                    ...+.+++..|++ +|++|   |+++++++.
T Consensus       276 ~~~~~~i~~~~~~~~~p~~~~~~s~~~~dli~~lL~-~p~~Rlgr~~~~ei~~H  328 (412)
T 2vd5_A          276 AETYGKIVHYKEHLSLPLVDEGVPEEARDFIQRLLC-PPETRLGRGGAGDFRTH  328 (412)
T ss_dssp             HHHHHHHHTHHHHCCCC----CCCHHHHHHHHTTSS-CGGGCTTTTTHHHHHTS
T ss_pred             HHHHHHHHhcccCcCCCccccCCCHHHHHHHHHHcC-ChhhcCCCCCHHHHhcC
Confidence            211                    1245567789998 99988   688888754

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...

Probab=99.86  E-value=2.3e-22  Score=187.12  Aligned_cols=177  Identities=20%  Similarity=0.277  Sum_probs=130.3

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhh-ccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEE
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFE-CSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLL  263 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~-~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll  263 (392)
                      |++.++.... +.++..|++|||++++++........ .......+..++.|++.||.|||+.   +++||||||+||++
T Consensus        67 h~~i~~~~~~-~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nil~  142 (279)
T 1qpc_A           67 HQRLVRLYAV-VTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER---NYIHRDLRAANILV  142 (279)
T ss_dssp             CTTBCCEEEE-ECSSSCEEEEECCTTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEE
T ss_pred             CcCcceEEEE-EcCCCcEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHhhEEE
Confidence            4444444433 23467899999999999877554332 1234555789999999999999998   89999999999999


Q ss_pred             cCCCCCeEeeeeceEEeCCCCcceeceeeecccccCchhHHH------HHHHhcCCCcc-eeec-ccccCCCCCCHH---
Q 045577          264 DAEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELLQ------AWKLWSEGDPM-EIID-EQTKMKGPFSAD---  332 (392)
Q Consensus       264 ~~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~~------~~diws~G~v~-~~ld-~~~~~~~~~~~~---  332 (392)
                      +.++.+||+|||+++..............++..|+| ||...      +.|+|+.|+++ +++. +...+.+....+   
T Consensus       143 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~a-PE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~  221 (279)
T 1qpc_A          143 SDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTA-PEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQ  221 (279)
T ss_dssp             CTTSCEEECCCTTCEECSSSCEECCTTCCCCTTTSC-HHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHH
T ss_pred             cCCCCEEECCCcccccccCcccccccCCCCccCccC-hhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCcccCHHHHHH
Confidence            999999999999998875333222333456788999 77653      78999999876 5555 433332221111   


Q ss_pred             -------------HHHHHHHHHHhhcccCcCCCCCHHHHHHHHccCC
Q 045577          333 -------------ELVKCIEVGLLCVQQRIEDWPTMSSVLTMLSNES  366 (392)
Q Consensus       333 -------------~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~L~~~~  366 (392)
                                   ....+.+++..|++.+|++||++.++++.|+...
T Consensus       222 ~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~  268 (279)
T 1qpc_A          222 NLERGYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFF  268 (279)
T ss_dssp             HHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             HHhcccCCCCcccccHHHHHHHHHHhccChhhCCCHHHHHHHHHHHH
Confidence                         1235667888999999999999999999998753

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}

Probab=99.86  E-value=2.7e-22  Score=191.70  Aligned_cols=176  Identities=19%  Similarity=0.211  Sum_probs=125.1

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEc
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLD  264 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~  264 (392)
                      |++.++..... ..++.++++|++.++++.....+.........+..++.|++.||.|||+.   +|+||||||+||+++
T Consensus        76 hp~iv~~~~~~-~~~~~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~  151 (327)
T 3lzb_A           76 NPHVCRLLGIC-LTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVK  151 (327)
T ss_dssp             BTTBCCCCEEE-ESSSEEEEECCCSSCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEE
T ss_pred             CCCeeEEEEEE-ecCCceEEEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhC---CCcCCCCCHHHEEEc
Confidence            56666655443 24568999999999998876555443445556889999999999999998   899999999999999


Q ss_pred             CCCCCeEeeeeceEEeCCC-CcceeceeeecccccCchhHH------HHHHHhcCCCcc-eeec-ccccCCCCC------
Q 045577          265 AEINPNISDFGPARIFGDQ-TEEVTGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIID-EQTKMKGPF------  329 (392)
Q Consensus       265 ~~~~~kl~DFGla~~~~~~-~~~~~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld-~~~~~~~~~------  329 (392)
                      .++.+||+|||+++..... .........+|+.|+| ||..      .+.|+|+.|+++ +++. +..++.+..      
T Consensus       152 ~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~t~~y~a-PE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~  230 (327)
T 3lzb_A          152 TPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA-LESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISS  230 (327)
T ss_dssp             ETTEEEECCTTC----------------CCCGGGSC-HHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHH
T ss_pred             CCCCEEEccCcceeEccCccccccccCCCccccccC-HHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHH
Confidence            9999999999999876522 2222233456788999 7654      478999999976 5555 433332211      


Q ss_pred             ----------CHHHHHHHHHHHHhhcccCcCCCCCHHHHHHHHccC
Q 045577          330 ----------SADELVKCIEVGLLCVQQRIEDWPTMSSVLTMLSNE  365 (392)
Q Consensus       330 ----------~~~~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~L~~~  365 (392)
                                +......+.+++..|++.||++||++.++++.|+..
T Consensus       231 ~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~  276 (327)
T 3lzb_A          231 ILEKGERLPQPPICTIDVYMIMRKCWMIDADSRPKFRELIIEFSKM  276 (327)
T ss_dssp             HHHTTCCCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             HHHcCCCCCCCccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHH
Confidence                      111223566788899999999999999999999875

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...

Probab=99.86  E-value=5.9e-23  Score=192.80  Aligned_cols=177  Identities=18%  Similarity=0.199  Sum_probs=124.4

Q ss_pred             CCCccccccCcCC--CCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeE
Q 045577          185 SGGCKRNWEADCG--DGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVL  262 (392)
Q Consensus       185 s~GCvR~~~l~C~--~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIl  262 (392)
                      |++.++.......  ....+++|||++++++...............+..++.|++.||.|||+.   +|+||||||+||+
T Consensus        70 h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil  146 (295)
T 3ugc_A           70 HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNIL  146 (295)
T ss_dssp             CTTBCCEEEEECHHHHTSCEEEEECCTTCBHHHHHHHCGGGCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEE
T ss_pred             CCCEeeEEEEEecCCCCceEEEEEeCCCCCHHHHHHhcccccCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCHhhEE
Confidence            5555555443211  2458999999999999876655443345555889999999999999998   8999999999999


Q ss_pred             EcCCCCCeEeeeeceEEeCCCCc--ceeceeeecccccCchhHH------HHHHHhcCCCcc-eeecccccCC-------
Q 045577          263 LDAEINPNISDFGPARIFGDQTE--EVTGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIIDEQTKMK-------  326 (392)
Q Consensus       263 l~~~~~~kl~DFGla~~~~~~~~--~~~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld~~~~~~-------  326 (392)
                      ++.++.+||+|||+++.......  .......++..|+| ||..      .+.|+|+.|+++ +++.+.....       
T Consensus       147 ~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~a-PE~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~  225 (295)
T 3ugc_A          147 VENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIFWYA-PESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFM  225 (295)
T ss_dssp             EEETTEEEECCCCSCC-------------CTTCGGGGCC-HHHHHHCCCCHHHHHHHHHHHHHHHHHTTCTTCSHHHHHH
T ss_pred             EcCCCeEEEccCcccccccCCcceeeeccCCCCccceeC-cHHhcCCCCChHHHHHHHHHHHHHHHhcccccCCChHHHH
Confidence            99999999999999987652221  11222346777999 7765      378999999876 4444311110       


Q ss_pred             -------------------------CCCCHHHHHHHHHHHHhhcccCcCCCCCHHHHHHHHccC
Q 045577          327 -------------------------GPFSADELVKCIEVGLLCVQQRIEDWPTMSSVLTMLSNE  365 (392)
Q Consensus       327 -------------------------~~~~~~~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~L~~~  365 (392)
                                               .+.+......+.+++..|++.||++||++.++++.|+..
T Consensus       226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~el~~~L~~l  289 (295)
T 3ugc_A          226 RMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQI  289 (295)
T ss_dssp             HHHCTTCCTHHHHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHH
T ss_pred             hhhcCccccchhHHHHHHHHhccCcCCCCcCcCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHH
Confidence                                     011111224567788899999999999999999999875

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*

Probab=99.86  E-value=5.8e-22  Score=189.68  Aligned_cols=160  Identities=18%  Similarity=0.200  Sum_probs=122.9

Q ss_pred             CeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcC--------cCCCCceeecccccceeEEcCCCCCeE
Q 045577          200 EVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLP--------EDSRLEIIHRDHKTSNVLLDAEINPNI  271 (392)
Q Consensus       200 ~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH--------~~~~~~iiHrDlKp~NIll~~~~~~kl  271 (392)
                      ..|++|||++++++.....+.  ......+..++.|++.||.|||        +.   +|+||||||+||+++.++.+||
T Consensus       114 ~~~lv~e~~~~g~L~~~l~~~--~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~---~ivH~Dlkp~NIll~~~~~~kL  188 (342)
T 1b6c_B          114 QLWLVSDYHEHGSLFDYLNRY--TVTVEGMIKLALSTASGLAHLHMEIVGTQGKP---AIAHRDLKSKNILVKKNGTCCI  188 (342)
T ss_dssp             CEEEEECCCTTCBHHHHHHHC--CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBC---EEECSCCSGGGEEECTTSCEEE
T ss_pred             eeEEEEeecCCCcHHHHHhcc--CccHHHHHHHHHHHHHHHHHHHHHHhhhcccC---CeeeCCCCHHHEEECCCCCEEE
Confidence            689999999999998765432  2345557899999999999999        55   8999999999999999999999


Q ss_pred             eeeeceEEeCCCCcc---eeceeeecccccCchhHH------------HHHHHhcCCCcc-eeecc----------cccC
Q 045577          272 SDFGPARIFGDQTEE---VTGRVIGTQTLKTVPELL------------QAWKLWSEGDPM-EIIDE----------QTKM  325 (392)
Q Consensus       272 ~DFGla~~~~~~~~~---~~~~~~gt~~y~a~~~~~------------~~~diws~G~v~-~~ld~----------~~~~  325 (392)
                      +|||+++........   ......||+.|+| ||..            .+.|+|+.|+++ +++.+          ..++
T Consensus       189 ~Dfg~~~~~~~~~~~~~~~~~~~~gt~~y~a-PE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~p~  267 (342)
T 1b6c_B          189 ADLGLAVRHDSATDTIDIAPNHRVGTKRYMA-PEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPY  267 (342)
T ss_dssp             CCCTTCEEEETTTTEEEECCCSCCCCGGGCC-HHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTT
T ss_pred             EECCCceeccccccccccccccCCcCcccCC-HhhhcccccccccccCCcccHHHHHHHHHHHHhccCcCCcccccccCc
Confidence            999999877533221   2234578999999 7654            468999999877 44443          1111


Q ss_pred             CC----------------------CCC-----HHHHHHHHHHHHhhcccCcCCCCCHHHHHHHHccC
Q 045577          326 KG----------------------PFS-----ADELVKCIEVGLLCVQQRIEDWPTMSSVLTMLSNE  365 (392)
Q Consensus       326 ~~----------------------~~~-----~~~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~L~~~  365 (392)
                      ..                      ..+     .+....+.+++..|++.||++||++.+|++.|+..
T Consensus       268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~i  334 (342)
T 1b6c_B          268 YDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQL  334 (342)
T ss_dssp             TTTSCSSCCHHHHHHHHTTSCCCCCCCGGGGTSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHH
T ss_pred             cccCcCcccHHHHHHHHHHHHhCCCCcccccchhHHHHHHHHHHHHhccChhhCCCHHHHHHHHHHH
Confidence            11                      111     13345677899999999999999999999999875

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*

Probab=99.85  E-value=2.9e-22  Score=197.53  Aligned_cols=171  Identities=16%  Similarity=0.172  Sum_probs=131.2

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEc
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLD  264 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~  264 (392)
                      |++.++.......++..|+||||++++++.....+.  ...+..+..++.||+.||.|||+.   +|+||||||+|||++
T Consensus       128 hp~Iv~l~~~~~~~~~~~lV~E~~~gg~L~~~l~~~--~~~e~~~~~~~~qi~~aL~~LH~~---givHrDLKp~NILl~  202 (410)
T 3v8s_A          128 SPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNY--DVPEKWARFYTAEVVLALDAIHSM---GFIHRDVKPDNMLLD  202 (410)
T ss_dssp             CTTBCCEEEEEECSSEEEEEECCCTTEEHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEC
T ss_pred             CCCCCeEEEEEEECCEEEEEEeCCCCCcHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeeEC
Confidence            666666655544456789999999999997755432  234555788999999999999998   899999999999999


Q ss_pred             CCCCCeEeeeeceEEeCCCCcceeceeeecccccCchhHH----------HHHHHhcCCCcc-eeecccccCCCCCCHHH
Q 045577          265 AEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELL----------QAWKLWSEGDPM-EIIDEQTKMKGPFSADE  333 (392)
Q Consensus       265 ~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~----------~~~diws~G~v~-~~ld~~~~~~~~~~~~~  333 (392)
                      .++.+||+|||+++..............||+.|+| ||+.          .+.|+|+.|+++ +++.+.+++.+....+.
T Consensus       203 ~~g~ikL~DFG~a~~~~~~~~~~~~~~~gt~~Y~A-PE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~  281 (410)
T 3v8s_A          203 KSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYIS-PEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGT  281 (410)
T ss_dssp             TTSCEEECCCTTCEECCTTSEEECCSCCSCGGGCC-HHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCSSHHHH
T ss_pred             CCCCEEEeccceeEeeccCCcccccCCcCCccccC-HHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCCChhhH
Confidence            99999999999999876444334445789999999 7765          378999999977 56666555443322111


Q ss_pred             -------------------HHHHHHHHHhhcccCcCC--CCCHHHHHHH
Q 045577          334 -------------------LVKCIEVGLLCVQQRIED--WPTMSSVLTM  361 (392)
Q Consensus       334 -------------------~~~~~~i~~~Cl~~dp~~--RPsm~eVv~~  361 (392)
                                         ...+.+++..|++.+|++  ||++.+|++.
T Consensus       282 ~~~i~~~~~~~~~p~~~~~s~~~~~li~~lL~~~~~rlgR~~~~ei~~H  330 (410)
T 3v8s_A          282 YSKIMNHKNSLTFPDDNDISKEAKNLICAFLTDREVRLGRNGVEEIKRH  330 (410)
T ss_dssp             HHHHHTHHHHCCCCTTCCCCHHHHHHHHHHSSCGGGCTTSSCHHHHHTS
T ss_pred             HHHHHhccccccCCCcccccHHHHHHHHHHccChhhhCCCCCHHHHhcC
Confidence                               124556777999988988  9999999975

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...

Probab=99.85  E-value=6.5e-22  Score=189.31  Aligned_cols=176  Identities=22%  Similarity=0.220  Sum_probs=131.9

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhc---------------cccchhhhhHHHHHHHhhhhcCcCCCC
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFEC---------------SKYSSYVTNILYGIARVILYLPEDSRL  249 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~---------------~~~~~~~~~i~~~ia~gL~yLH~~~~~  249 (392)
                      |++.++........+..|++|||++++++.........               ......+..++.|++.||.|||+.   
T Consensus       100 hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---  176 (334)
T 2pvf_A          100 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---  176 (334)
T ss_dssp             CTTBCCEEEEECSSSCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHHT---
T ss_pred             CCCEeeEEEEEccCCceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---
Confidence            66666665554456778999999999998775543321               123445788999999999999998   


Q ss_pred             ceeecccccceeEEcCCCCCeEeeeeceEEeCCCCc-ceeceeeecccccCchhHH------HHHHHhcCCCcc-eeec-
Q 045577          250 EIIHRDHKTSNVLLDAEINPNISDFGPARIFGDQTE-EVTGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIID-  320 (392)
Q Consensus       250 ~iiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~~-~~~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld-  320 (392)
                      +|+||||||+||+++.++.+||+|||+++....... .......+++.|+| ||..      .+.|+|+.|+++ +++. 
T Consensus       177 ~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~a-PE~~~~~~~~~~~Di~slG~il~ellt~  255 (334)
T 2pvf_A          177 KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMA-PEALFDRVYTHQSDVWSFGVLMWEIFTL  255 (334)
T ss_dssp             TEECSCCSGGGEEECTTCCEEECCCTTCEECTTTSSEECCSCCCCCGGGCC-HHHHHHCEECHHHHHHHHHHHHHHHHTT
T ss_pred             CeeCCCCccceEEEcCCCCEEEccccccccccccccccccCCCCcccceeC-hHHhcCCCcChHHHHHHHHHHHHHHHhC
Confidence            899999999999999999999999999988753221 22233457788999 7755      478999999977 4555 


Q ss_pred             ccccCCCCCCHHH-----------------HHHHHHHHHhhcccCcCCCCCHHHHHHHHccC
Q 045577          321 EQTKMKGPFSADE-----------------LVKCIEVGLLCVQQRIEDWPTMSSVLTMLSNE  365 (392)
Q Consensus       321 ~~~~~~~~~~~~~-----------------~~~~~~i~~~Cl~~dp~~RPsm~eVv~~L~~~  365 (392)
                      +..++.+. ..++                 ...+.+++..|++.+|++||++.++++.|+..
T Consensus       256 g~~p~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~l  316 (334)
T 2pvf_A          256 GGSPYPGI-PVEELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI  316 (334)
T ss_dssp             SCCSSTTC-CHHHHHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             CCCCcCcC-CHHHHHHHHhcCCCCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence            43333222 1111                 23466788899999999999999999999875

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...

Probab=99.85  E-value=2.2e-22  Score=193.39  Aligned_cols=171  Identities=15%  Similarity=0.068  Sum_probs=127.8

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEc
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLD  264 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~  264 (392)
                      |++.++........+..|+||||++++++.....+... .....+..++.||+.||.|||+.   +|+||||||+||+++
T Consensus        64 hp~iv~l~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~-~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~  139 (337)
T 1o6l_A           64 HPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERV-FTEERARFYGAEIVSALEYLHSR---DVVYRDIKLENLMLD  139 (337)
T ss_dssp             CTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHHHSC-CCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEEC
T ss_pred             CCcCcceEEEEEeCCEEEEEEeCCCCCcHHHHHHhcCC-CCHHHHHHHHHHHHHHHHHHHHC---CeecCcCCHHHEEEC
Confidence            55555555444445678999999999999776554433 34445788999999999999998   899999999999999


Q ss_pred             CCCCCeEeeeeceEEeCCCCcceeceeeecccccCchhHH------HHHHHhcCCCcc-eeecccccCCCCCCHHH----
Q 045577          265 AEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIIDEQTKMKGPFSADE----  333 (392)
Q Consensus       265 ~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld~~~~~~~~~~~~~----  333 (392)
                      .++.+||+|||+++..... ........||+.|+| ||+.      .+.|+|+.|+++ +++.+..++.+....+.    
T Consensus       140 ~~g~vkL~DFG~a~~~~~~-~~~~~~~~gt~~y~a-PE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i  217 (337)
T 1o6l_A          140 KDGHIKITDFGLCKEGISD-GATMKTFCGTPEYLA-PEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELI  217 (337)
T ss_dssp             TTSCEEECCCTTCBCSCCT-TCCBCCCEECGGGCC-GGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHH
T ss_pred             CCCCEEEeeccchhhcccC-CCcccccccChhhCC-hhhhcCCCCCchhhcccchhHHHHHhcCCCCCCCCCHHHHHHHH
Confidence            9999999999999854321 222344689999999 7654      478999999977 56666544443322111    


Q ss_pred             -----------HHHHHHHHHhhcccCcCCCC-----CHHHHHHH
Q 045577          334 -----------LVKCIEVGLLCVQQRIEDWP-----TMSSVLTM  361 (392)
Q Consensus       334 -----------~~~~~~i~~~Cl~~dp~~RP-----sm~eVv~~  361 (392)
                                 ...+.+++..|++.||++||     ++.+|++.
T Consensus       218 ~~~~~~~p~~~s~~~~~li~~lL~~dP~~R~g~~~~~~~ei~~h  261 (337)
T 1o6l_A          218 LMEEIRFPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEH  261 (337)
T ss_dssp             HHCCCCCCTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTS
T ss_pred             HcCCCCCCCCCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHHcC
Confidence                       12456688899999999999     88888753

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A

Probab=99.85  E-value=3.2e-22  Score=187.64  Aligned_cols=170  Identities=18%  Similarity=0.223  Sum_probs=122.0

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEc
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLD  264 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~  264 (392)
                      |++.++.......++..+++|||++++.+.... ..........+..++.|++.||.|||+.   +|+||||||+||+++
T Consensus        60 h~~iv~~~~~~~~~~~~~lv~e~~~~~l~~~~~-~~~~~l~~~~~~~~~~ql~~~l~~lH~~---~ivH~dikp~Nil~~  135 (292)
T 3o0g_A           60 HKNIVRLHDVLHSDKKLTLVFEFCDQDLKKYFD-SCNGDLDPEIVKSFLFQLLKGLGFCHSR---NVLHRDLKPQNLLIN  135 (292)
T ss_dssp             CTTBCCEEEEEEETTEEEEEEECCSEEHHHHHH-HTTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEC
T ss_pred             CCCEeeEEeEEEeCCEEEEEEecCCCCHHHHHH-hCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEc
Confidence            555555544444456789999999864443332 2222334555889999999999999998   899999999999999


Q ss_pred             CCCCCeEeeeeceEEeCCCCcceeceeeecccccCchhHH-------HHHHHhcCCCcc-eeecccccCCCCCCH-HH--
Q 045577          265 AEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELL-------QAWKLWSEGDPM-EIIDEQTKMKGPFSA-DE--  333 (392)
Q Consensus       265 ~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~-------~~~diws~G~v~-~~ld~~~~~~~~~~~-~~--  333 (392)
                      .++.+||+|||+++....... ......||+.|+| ||+.       .+.|+|+.|+++ +++.+...+...... +.  
T Consensus       136 ~~~~~kl~Dfg~~~~~~~~~~-~~~~~~~t~~y~a-PE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~~~~~~~~~  213 (292)
T 3o0g_A          136 RNGELKLANFGLARAFGIPVR-CYSAEVVTLWYRP-PDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLK  213 (292)
T ss_dssp             TTSCEEECCCTTCEECCSCCS-CCCSCCSCGGGCC-HHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHH
T ss_pred             CCCCEEEeecccceecCCccc-cccCCccccCCcC-hHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCCCCHHHHHH
Confidence            999999999999988652222 2233578999999 7754       378999999987 455343332222211 11  


Q ss_pred             ------------------------------------------HHHHHHHHHhhcccCcCCCCCHHHHHH
Q 045577          334 ------------------------------------------LVKCIEVGLLCVQQRIEDWPTMSSVLT  360 (392)
Q Consensus       334 ------------------------------------------~~~~~~i~~~Cl~~dp~~RPsm~eVv~  360 (392)
                                                                ...+.+++..|++.||++|||+.|+++
T Consensus       214 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~  282 (292)
T 3o0g_A          214 RIFRLLGTPTEEQWPSMTKLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQ  282 (292)
T ss_dssp             HHHHHHCCCCTTTCTTGGGSTTCCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             HHHHHhCCCChhhhhhhcccccccccccccCCcchhhcccccChHHHHHHHHHhccChhhCCCHHHHhc
Confidence                                                      123457888999999999999999886

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=99.85  E-value=1.7e-22  Score=186.55  Aligned_cols=177  Identities=19%  Similarity=0.224  Sum_probs=130.1

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEc
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLD  264 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~  264 (392)
                      |++.++........+..|++|||++++++...............+..++.|++.||.|||+.   +++||||||+||+++
T Consensus        62 h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nili~  138 (267)
T 3t9t_A           62 HPKLVQLYGVCLEQAPICLVTEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEA---CVIHRDLAARNCLVG  138 (267)
T ss_dssp             CTTBCCEEEEECSSSSCEEEECCCTTCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEEC
T ss_pred             CCCEeeEEEEEccCCCeEEEEeCCCCCcHHHHHhhCcccCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCchheEEEC
Confidence            55555554444445678999999999998776544433345556789999999999999998   899999999999999


Q ss_pred             CCCCCeEeeeeceEEeCCCCcceeceeeecccccCchhHHH------HHHHhcCCCcc-eeec-ccccCCCCCCHH----
Q 045577          265 AEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELLQ------AWKLWSEGDPM-EIID-EQTKMKGPFSAD----  332 (392)
Q Consensus       265 ~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~~------~~diws~G~v~-~~ld-~~~~~~~~~~~~----  332 (392)
                      .++.+||+|||+++..............++..|+| ||...      +.|+|+.|+++ +++. +..++......+    
T Consensus       139 ~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~y~a-PE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~  217 (267)
T 3t9t_A          139 ENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWAS-PEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVED  217 (267)
T ss_dssp             GGGCEEECCTTGGGGBCCHHHHSTTSTTCCGGGCC-HHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHH
T ss_pred             CCCCEEEcccccccccccccccccccccccccccC-hhhhcCCCccchhchhhhHHHHHHHhccCCCCCCCCCHHHHHHH
Confidence            99999999999987653221112222456778999 77653      68999999877 4555 433332221111    


Q ss_pred             ------------HHHHHHHHHHhhcccCcCCCCCHHHHHHHHccC
Q 045577          333 ------------ELVKCIEVGLLCVQQRIEDWPTMSSVLTMLSNE  365 (392)
Q Consensus       333 ------------~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~L~~~  365 (392)
                                  ....+.+++..|++.+|++||++.++++.|+..
T Consensus       218 i~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l  262 (267)
T 3t9t_A          218 ISTGFRLYKPRLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEI  262 (267)
T ss_dssp             HHTTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             HhcCCcCCCCccCcHHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence                        123466788899999999999999999999864

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}

Probab=99.85  E-value=2.8e-22  Score=196.70  Aligned_cols=165  Identities=21%  Similarity=0.145  Sum_probs=125.1

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEc
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLD  264 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~  264 (392)
                      |+++++........+..|+||||++++++.....+... ..+..+..++.||+.||.|||+.   +|+||||||+|||++
T Consensus       112 hp~Iv~l~~~~~~~~~~~lV~E~~~gg~L~~~l~~~~~-l~~~~~~~~~~qi~~aL~~LH~~---givHrDLKp~NILl~  187 (396)
T 4dc2_A          112 HPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRK-LPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLD  187 (396)
T ss_dssp             CTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHHHSS-CCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEEC
T ss_pred             CCCcCeeEEEEEECCEEEEEEEcCCCCcHHHHHHHcCC-CCHHHHHHHHHHHHHHHHHHHHC---CEEeccCCHHHEEEC
Confidence            66666665554456779999999999999776554332 34555788999999999999998   899999999999999


Q ss_pred             CCCCCeEeeeeceEEeCCCCcceeceeeecccccCchhHH------HHHHHhcCCCcc-eeecccccCCCCC--------
Q 045577          265 AEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIIDEQTKMKGPF--------  329 (392)
Q Consensus       265 ~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld~~~~~~~~~--------  329 (392)
                      .++.+||+|||+++.... ........+||+.|+| ||+.      .+.|+|+.|+++ +++.+.+++....        
T Consensus       188 ~~g~ikL~DFGla~~~~~-~~~~~~~~~gt~~Y~a-PE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~~~~  265 (396)
T 4dc2_A          188 SEGHIKLTDYGMCKEGLR-PGDTTSTFCGTPNYIA-PEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQN  265 (396)
T ss_dssp             TTSCEEECCCTTCBCCCC-TTCCBCCCCBCGGGCC-HHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTTTTC------C
T ss_pred             CCCCEEEeecceeeeccc-CCCccccccCCcccCC-chhhcCCCCChHHHHHHHHHHHHHHHhCCCCCcccccccccchh
Confidence            999999999999985322 1223344689999999 7776      378999999977 6666655553211        


Q ss_pred             CHH----------------HHHHHHHHHHhhcccCcCCCCCH
Q 045577          330 SAD----------------ELVKCIEVGLLCVQQRIEDWPTM  355 (392)
Q Consensus       330 ~~~----------------~~~~~~~i~~~Cl~~dp~~RPsm  355 (392)
                      ..+                ....+.+++..|++.||++||+.
T Consensus       266 ~~~~~~~~i~~~~~~~p~~~s~~~~~li~~lL~~dP~~R~~~  307 (396)
T 4dc2_A          266 TEDYLFQVILEKQIRIPRSLSVKAASVLKSFLNKDPKERLGC  307 (396)
T ss_dssp             CHHHHHHHHHHCCCCCCTTSCHHHHHHHHHHTCSCTTTSTTC
T ss_pred             hHHHHHHHHhccccCCCCcCCHHHHHHHHHHhcCCHhHcCCC
Confidence            111                11245678889999999999985

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A

Probab=99.85  E-value=6.5e-22  Score=197.41  Aligned_cols=173  Identities=16%  Similarity=0.173  Sum_probs=130.1

Q ss_pred             CCCccccccCcCCC-CCeeEEecCccCCCcChhhhhhhcc-ccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeE
Q 045577          185 SGGCKRNWEADCGD-GEVFLMFEGIKLPDKSEFTCEFECS-KYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVL  262 (392)
Q Consensus       185 s~GCvR~~~l~C~~-~~~~lv~e~~~~~~l~~~~~~~~~~-~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIl  262 (392)
                      |++.++........ +..|+||||++++++.....+.... .....++.++.|++.||.|||++   +++||||||+|||
T Consensus       245 h~niv~~~~~~~~~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nil  321 (450)
T 1k9a_A          245 HSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRDLAARNVL  321 (450)
T ss_dssp             CTTBCCEEEEEECTTSCEEEEEECCTTCBHHHHHHHHCTTTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEE
T ss_pred             CCCEEEEEEEEEcCCCceEEEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHhhEE
Confidence            78888776654333 4689999999999998765543322 34555789999999999999998   8999999999999


Q ss_pred             EcCCCCCeEeeeeceEEeCCCCcceeceeeecccccCchhHH------HHHHHhcCCCcc-eeec-ccccCCCCC-----
Q 045577          263 LDAEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIID-EQTKMKGPF-----  329 (392)
Q Consensus       263 l~~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld-~~~~~~~~~-----  329 (392)
                      ++.++.+||+|||+++.....    .....++..|+| ||..      .+.|+|++|+++ +++. +..++.+..     
T Consensus       322 l~~~~~~kl~DfG~a~~~~~~----~~~~~~~~~y~a-PE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~~~  396 (450)
T 1k9a_A          322 VSEDNVAKVSDFGLTKEASST----QDTGKLPVKWTA-PEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVV  396 (450)
T ss_dssp             ECTTSCEEECCCTTCEECC----------CCCTTTSC-HHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSCTTTHH
T ss_pred             ECCCCCEEEeeCCCccccccc----ccCCCCCcceeC-HHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHH
Confidence            999999999999999864321    122356889999 7765      478999999877 5554 433332211     


Q ss_pred             -----------CHHHHHHHHHHHHhhcccCcCCCCCHHHHHHHHccC
Q 045577          330 -----------SADELVKCIEVGLLCVQQRIEDWPTMSSVLTMLSNE  365 (392)
Q Consensus       330 -----------~~~~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~L~~~  365 (392)
                                 +......+.+++..||+.||++||++.++++.|+..
T Consensus       397 ~~i~~~~~~~~p~~~~~~l~~li~~cl~~dp~~Rpt~~~l~~~L~~i  443 (450)
T 1k9a_A          397 PRVEKGYKMDAPDGCPPAVYDVMKNCWHLDAATRPTFLQLREQLEHI  443 (450)
T ss_dssp             HHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             HHHHcCCCCCCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHH
Confidence                       111224567788899999999999999999999864

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}

Probab=99.85  E-value=6.7e-22  Score=187.12  Aligned_cols=183  Identities=18%  Similarity=0.165  Sum_probs=126.3

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhcc--ccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeE
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECS--KYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVL  262 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~--~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIl  262 (392)
                      |++.++.....  .+..|++|||++++++..........  .....++.++.|+++||.|||+.+..+|+||||||+||+
T Consensus        60 hp~iv~~~~~~--~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIl  137 (307)
T 2eva_A           60 HPNIVKLYGAC--LNPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLL  137 (307)
T ss_dssp             CTTBCCEEEBC--TTTTEEEEECCTTCBHHHHHHCSSSEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEE
T ss_pred             CCCcCeEEEEE--cCCcEEEEEcCCCCCHHHHHhccCCCCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEE
Confidence            55666554432  24689999999999998765443322  234457889999999999999943338999999999999


Q ss_pred             EcCCCC-CeEeeeeceEEeCCCCcceeceeeecccccCchhHH------HHHHHhcCCCcc-eeecccccCCCCCC----
Q 045577          263 LDAEIN-PNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIIDEQTKMKGPFS----  330 (392)
Q Consensus       263 l~~~~~-~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld~~~~~~~~~~----  330 (392)
                      ++.++. +||+|||+++.....    .....||+.|+| ||..      .+.|+|+.|+++ +++.++..+.....    
T Consensus       138 l~~~~~~~kl~Dfg~~~~~~~~----~~~~~gt~~y~a-PE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~  212 (307)
T 2eva_A          138 LVAGGTVLKICDFGTACDIQTH----MTNNKGSAAWMA-PEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFR  212 (307)
T ss_dssp             EETTTTEEEECCCCC----------------CCTTSSC-HHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTTTCSSHHH
T ss_pred             EeCCCCEEEEcccccccccccc----cccCCCCCceEC-hhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchhhCccHHH
Confidence            998886 799999999765321    223468999999 7765      378999999876 55555433322111    


Q ss_pred             --------------HHHHHHHHHHHHhhcccCcCCCCCHHHHHHHHccCCCCCCCCCC
Q 045577          331 --------------ADELVKCIEVGLLCVQQRIEDWPTMSSVLTMLSNESIKVPQPEE  374 (392)
Q Consensus       331 --------------~~~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~L~~~~~~~~~p~~  374 (392)
                                    ......+.+++..|++.||++||++.++++.|+......+.+..
T Consensus       213 ~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~~~~~~  270 (307)
T 2eva_A          213 IMWAVHNGTRPPLIKNLPKPIESLMTRCWSKDPSQRPSMEEIVKIMTHLMRYFPGADE  270 (307)
T ss_dssp             HHHHHHTTCCCCCBTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHGGGCCCTTS
T ss_pred             HHHHHhcCCCCCcccccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHhccCCCC
Confidence                          11123566788899999999999999999999876444444433

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}

Probab=99.85  E-value=3.8e-22  Score=198.66  Aligned_cols=171  Identities=16%  Similarity=0.151  Sum_probs=128.2

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEc
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLD  264 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~  264 (392)
                      |++.++.......++..|++|||+.++++......... ..+..+..++.||+.||.|||+.   +|+||||||+||+++
T Consensus        69 hpnIv~l~~~~~~~~~~~lv~E~~~gg~L~~~i~~~~~-~~e~~~~~i~~qil~aL~~lH~~---givHrDlKp~NIll~  144 (444)
T 3soa_A           69 HPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREY-YSEADASHCIQQILEAVLHCHQM---GVVHRNLKPENLLLA  144 (444)
T ss_dssp             BTTBCCEEEEEECSSEEEEEECCCBCCBHHHHHHHCSC-CCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSSTTEEES
T ss_pred             CcCCCeEEEEEEECCEEEEEEEeCCCCCHHHHHHHcCC-CCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEe
Confidence            66666666655556789999999999998776554433 34455788999999999999998   899999999999998


Q ss_pred             ---CCCCCeEeeeeceEEeCCCCcceeceeeecccccCchhHH------HHHHHhcCCCcc-eeecccccCCCCCCH---
Q 045577          265 ---AEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIIDEQTKMKGPFSA---  331 (392)
Q Consensus       265 ---~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld~~~~~~~~~~~---  331 (392)
                         .++.+||+|||+++....... ......||+.|+| ||+.      .+.|+|+.|+++ +++.+.+++.+....   
T Consensus       145 ~~~~~~~vkL~DFG~a~~~~~~~~-~~~~~~gt~~Y~A-PE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~~~~~~~~  222 (444)
T 3soa_A          145 SKLKGAAVKLADFGLAIEVEGEQQ-AWFGFAGTPGYLS-PEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQHRLY  222 (444)
T ss_dssp             BSSTTCCEEECCCSSCBCCCTTCC-BCCCSCSCGGGCC-HHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHH
T ss_pred             ccCCCCcEEEccCceeEEecCCCc-eeecccCCcccCC-HHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCccHHHHH
Confidence               457899999999976653222 2233679999999 7765      378999999987 455554443222111   


Q ss_pred             ----------------HHHHHHHHHHHhhcccCcCCCCCHHHHHHH
Q 045577          332 ----------------DELVKCIEVGLLCVQQRIEDWPTMSSVLTM  361 (392)
Q Consensus       332 ----------------~~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~  361 (392)
                                      .....+.+++..|++.||++||++.++++.
T Consensus       223 ~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~e~L~h  268 (444)
T 3soa_A          223 QQIKAGAYDFPSPEWDTVTPEAKDLINKMLTINPSKRITAAEALKH  268 (444)
T ss_dssp             HHHHHTCCCCCTTTTTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred             HHHHhCCCCCCccccccCCHHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence                            112346678889999999999999999864

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*

Probab=99.85  E-value=2.9e-22  Score=188.43  Aligned_cols=177  Identities=17%  Similarity=0.179  Sum_probs=129.1

Q ss_pred             CCCccccccCcCCC--CCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeE
Q 045577          185 SGGCKRNWEADCGD--GEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVL  262 (392)
Q Consensus       185 s~GCvR~~~l~C~~--~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIl  262 (392)
                      |++.++........  ...+++|||++++++.....+.........+..++.|++.||.|||+.   +|+||||||+||+
T Consensus        82 h~~i~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nil  158 (302)
T 4e5w_A           82 HENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLGSR---QYVHRDLAARNVL  158 (302)
T ss_dssp             CTTBCCEEEEEEC---CCEEEEEECCTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEE
T ss_pred             CCCeeeeeeEEecCCCceEEEEEEeCCCCcHHHHHHhccccCCHHHHHHHHHHHHHHHHHhhcC---CcccCCCchheEE
Confidence            55555554433222  457999999999999876544443345556889999999999999998   8999999999999


Q ss_pred             EcCCCCCeEeeeeceEEeCCCCc--ceeceeeecccccCchhHH------HHHHHhcCCCcc-eeecccccC--------
Q 045577          263 LDAEINPNISDFGPARIFGDQTE--EVTGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIIDEQTKM--------  325 (392)
Q Consensus       263 l~~~~~~kl~DFGla~~~~~~~~--~~~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld~~~~~--------  325 (392)
                      ++.++.+||+|||+++.......  .......||..|+| ||..      .+.|+|+.|+++ +++.+....        
T Consensus       159 ~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~a-PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~  237 (302)
T 4e5w_A          159 VESEHQVKIGDFGLTKAIETDKEYYTVKDDRDSPVFWYA-PECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMALFL  237 (302)
T ss_dssp             EEETTEEEECCCTTCEECCTTCCEEECCCCTTCCGGGCC-HHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHH
T ss_pred             EcCCCCEEECcccccccccCCCcceeccCCCCCCccccC-CeeecCCCCCcchhHHHHHHHHHHHHHccCCCcchhhHHh
Confidence            99999999999999988763322  22233567888999 7765      378999999876 444431110        


Q ss_pred             -----------------------CCCCCHHHHHHHHHHHHhhcccCcCCCCCHHHHHHHHccC
Q 045577          326 -----------------------KGPFSADELVKCIEVGLLCVQQRIEDWPTMSSVLTMLSNE  365 (392)
Q Consensus       326 -----------------------~~~~~~~~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~L~~~  365 (392)
                                             ....+......+.+++..|++.||.+||++.++++.|+..
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~l  300 (302)
T 4e5w_A          238 KMIGPTHGQMTVTRLVNTLKEGKRLPCPPNCPDEVYQLMRKCWEFQPSNRTSFQNLIEGFEAL  300 (302)
T ss_dssp             HHHCSCCGGGHHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHH
T ss_pred             hccCCcccccCHHHHHHHHhccCCCCCCCCCCHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHH
Confidence                                   0001111223567788899999999999999999999764

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...

Probab=99.85  E-value=4.4e-22  Score=188.29  Aligned_cols=177  Identities=20%  Similarity=0.205  Sum_probs=130.6

Q ss_pred             CCCccccccCcCC-CCCeeEEecCccCCCcChhhhhhhcc---------------ccchhhhhHHHHHHHhhhhcCcCCC
Q 045577          185 SGGCKRNWEADCG-DGEVFLMFEGIKLPDKSEFTCEFECS---------------KYSSYVTNILYGIARVILYLPEDSR  248 (392)
Q Consensus       185 s~GCvR~~~l~C~-~~~~~lv~e~~~~~~l~~~~~~~~~~---------------~~~~~~~~i~~~ia~gL~yLH~~~~  248 (392)
                      |++.++....... ++..+++|||++++++..........               .....+..++.|++.||.|||+.  
T Consensus        90 hp~iv~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~--  167 (316)
T 2xir_A           90 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR--  167 (316)
T ss_dssp             CTTBCCEEEEECCTTSCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHHT--
T ss_pred             CCCeeeEEEEEecCCCceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHhC--
Confidence            5566665544322 34589999999999987754432211               23445788999999999999998  


Q ss_pred             CceeecccccceeEEcCCCCCeEeeeeceEEeCCC-CcceeceeeecccccCchhHH------HHHHHhcCCCcc-eeec
Q 045577          249 LEIIHRDHKTSNVLLDAEINPNISDFGPARIFGDQ-TEEVTGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIID  320 (392)
Q Consensus       249 ~~iiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~-~~~~~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld  320 (392)
                       +|+||||||+||+++.++.+||+|||+++..... .........||+.|+| ||..      .+.|+|+.|+++ +++.
T Consensus       168 -~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~a-PE~~~~~~~~~~~Di~slG~il~~l~t  245 (316)
T 2xir_A          168 -KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMA-PETIFDRVYTIQSDVWSFGVLLWEIFS  245 (316)
T ss_dssp             -TCCCSCCSGGGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCC-HHHHHHCCCCHHHHHHHHHHHHHHHHT
T ss_pred             -CcccccCccceEEECCCCCEEECCCccccccccCccceeccCCCcceeecC-chhhccccccchhHHHHHHHHHHHHHh
Confidence             8999999999999999999999999999865422 2233344678899999 7755      378999999977 4554


Q ss_pred             -ccccCCCCCCHH-----------------HHHHHHHHHHhhcccCcCCCCCHHHHHHHHccC
Q 045577          321 -EQTKMKGPFSAD-----------------ELVKCIEVGLLCVQQRIEDWPTMSSVLTMLSNE  365 (392)
Q Consensus       321 -~~~~~~~~~~~~-----------------~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~L~~~  365 (392)
                       +..++.+....+                 ....+.+++..|++.+|.+||++.++++.|+..
T Consensus       246 ~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~  308 (316)
T 2xir_A          246 LGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNL  308 (316)
T ss_dssp             TSCCSSTTCCCSHHHHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             CCCCCCcccchhHHHHHHhccCccCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence             433333222111                 123567788899999999999999999999864

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}

Probab=99.85  E-value=6e-22  Score=192.91  Aligned_cols=170  Identities=17%  Similarity=0.141  Sum_probs=129.6

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEE-
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLL-  263 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll-  263 (392)
                      |++.++........+..|+||||++++++............+..+..++.|++.||.|||+.   +|+||||||+||++ 
T Consensus       145 hpnIv~~~~~~~~~~~~~lv~E~~~~~~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~  221 (373)
T 2x4f_A          145 HANLIQLYDAFESKNDIVLVMEYVDGGELFDRIIDESYNLTELDTILFMKQICEGIRHMHQM---YILHLDLKPENILCV  221 (373)
T ss_dssp             CTTBCCEEEEEECSSEEEEEEECCTTCEEHHHHHHTGGGCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEE
T ss_pred             CCCCCeEEEEEEECCEEEEEEeCCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHHEEEe
Confidence            66777666655556778999999999998765544444445555788999999999999998   89999999999999 


Q ss_pred             -cCCCCCeEeeeeceEEeCCCCcceeceeeecccccCchhHH------HHHHHhcCCCcc-eeecccccCCCCCCHHH--
Q 045577          264 -DAEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIIDEQTKMKGPFSADE--  333 (392)
Q Consensus       264 -~~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld~~~~~~~~~~~~~--  333 (392)
                       +.++.+||+|||+++.......  .....||+.|+| ||+.      .+.|+|+.|+++ +++.+..++.+....+.  
T Consensus       222 ~~~~~~~kl~DFG~a~~~~~~~~--~~~~~gt~~y~a-PE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~  298 (373)
T 2x4f_A          222 NRDAKQIKIIDFGLARRYKPREK--LKVNFGTPEFLA-PEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDAETLN  298 (373)
T ss_dssp             ETTTTEEEECCCSSCEECCTTCB--CCCCCSSCTTCC-HHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHH
T ss_pred             cCCCCcEEEEeCCCceecCCccc--cccccCCCcEeC-hhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHHHHH
Confidence             5677899999999998753222  223569999999 7765      478999999876 55555444433222111  


Q ss_pred             -----------------HHHHHHHHHhhcccCcCCCCCHHHHHH
Q 045577          334 -----------------LVKCIEVGLLCVQQRIEDWPTMSSVLT  360 (392)
Q Consensus       334 -----------------~~~~~~i~~~Cl~~dp~~RPsm~eVv~  360 (392)
                                       ...+.+++..|++.||++||++.++++
T Consensus       299 ~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~e~l~  342 (373)
T 2x4f_A          299 NILACRWDLEDEEFQDISEEAKEFISKLLIKEKSWRISASEALK  342 (373)
T ss_dssp             HHHHTCCCSCSGGGTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred             HHHhccCCCChhhhccCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence                             234567888999999999999999987

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*

Probab=99.85  E-value=5.4e-22  Score=192.42  Aligned_cols=169  Identities=18%  Similarity=0.196  Sum_probs=127.8

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEc
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLD  264 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~  264 (392)
                      |++.++........+..|+||||++++++.....+.. ...+..+..++.||+.||.|||+.   +|+||||||+||+++
T Consensus        74 hpnIv~l~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~-~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~  149 (361)
T 2yab_A           74 HPNIITLHDVYENRTDVVLILELVSGGELFDFLAQKE-SLSEEEATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLL  149 (361)
T ss_dssp             CTTBCCEEEEEECSSEEEEEEECCCSCBHHHHHTTCS-CCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEES
T ss_pred             CcCCCcEEEEEEeCCEEEEEEEcCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEe
Confidence            5566665555444567899999999999987654433 234555889999999999999998   899999999999998


Q ss_pred             CCC----CCeEeeeeceEEeCCCCcceeceeeecccccCchhHH------HHHHHhcCCCcc-eeecccccCCCCCCHHH
Q 045577          265 AEI----NPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIIDEQTKMKGPFSADE  333 (392)
Q Consensus       265 ~~~----~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld~~~~~~~~~~~~~  333 (392)
                      .++    .+||+|||+++......  ......||+.|+| ||+.      ...|+|+.|+++ +++.+.+++.+....+.
T Consensus       150 ~~~~~~~~vkl~DFG~a~~~~~~~--~~~~~~gt~~y~a-PE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~~~~~~~  226 (361)
T 2yab_A          150 DKNIPIPHIKLIDFGLAHEIEDGV--EFKNIFGTPEFVA-PEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQET  226 (361)
T ss_dssp             CTTSSSCCEEECCCSSCEECCTTC--CCCCCCSCGGGCC-HHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHH
T ss_pred             CCCCCccCEEEEecCCceEcCCCC--ccccCCCCccEEC-chHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHH
Confidence            776    79999999998865322  2234679999999 7765      378999999876 56666545433321111


Q ss_pred             -------------------HHHHHHHHHhhcccCcCCCCCHHHHHH
Q 045577          334 -------------------LVKCIEVGLLCVQQRIEDWPTMSSVLT  360 (392)
Q Consensus       334 -------------------~~~~~~i~~~Cl~~dp~~RPsm~eVv~  360 (392)
                                         ...+.+++..|++.||++||++.++++
T Consensus       227 ~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~  272 (361)
T 2yab_A          227 LANITAVSYDFDEEFFSQTSELAKDFIRKLLVKETRKRLTIQEALR  272 (361)
T ss_dssp             HHHHHTTCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred             HHHHHhcCCCCCchhccCCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence                               124567888999999999999999875

>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A

Probab=99.85  E-value=5.8e-22  Score=185.55  Aligned_cols=163  Identities=19%  Similarity=0.142  Sum_probs=124.1

Q ss_pred             CCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEE---cCCCCCeEeee
Q 045577          198 DGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLL---DAEINPNISDF  274 (392)
Q Consensus       198 ~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll---~~~~~~kl~DF  274 (392)
                      ++..+++|||+ ++++...............+..++.|++.||.|||+.   +|+||||||+||++   +.++.+||+||
T Consensus        77 ~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIl~~~~~~~~~~kL~Df  152 (296)
T 4hgt_A           77 GDYNVMVMELL-GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSK---NFIHRDVKPDNFLMGLGKKGNLVYIIDF  152 (296)
T ss_dssp             TTEEEEEEECC-CCBHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECCGGGTTCEEECCC
T ss_pred             CCceEEEEEcc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeeeeccCCCCeEEEecC
Confidence            35579999999 7787765443233345556899999999999999998   89999999999999   78899999999


Q ss_pred             eceEEeCCCCc------ceeceeeecccccCchhHH------HHHHHhcCCCcc-eeecccccCCCCCCH---H------
Q 045577          275 GPARIFGDQTE------EVTGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIIDEQTKMKGPFSA---D------  332 (392)
Q Consensus       275 Gla~~~~~~~~------~~~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld~~~~~~~~~~~---~------  332 (392)
                      |+++.......      .......||+.|+| ||..      .+.|+|+.|+++ +++.++.++.+....   .      
T Consensus       153 g~a~~~~~~~~~~~~~~~~~~~~~gt~~y~a-PE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~  231 (296)
T 4hgt_A          153 GLAKKYRDARTHQHIPYRENKNLTGTARYAS-INTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERIS  231 (296)
T ss_dssp             TTCEECBCTTTCCBCCCCCSCCCCSCGGGCC-HHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHH
T ss_pred             ccceeccCcccCccCCCCcccccCCCccccc-hHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcccchhhhhhhhhhhh
Confidence            99998753221      12234678999999 7765      478999999876 555554444321110   0      


Q ss_pred             --------------HHHHHHHHHHhhcccCcCCCCCHHHHHHHHccC
Q 045577          333 --------------ELVKCIEVGLLCVQQRIEDWPTMSSVLTMLSNE  365 (392)
Q Consensus       333 --------------~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~L~~~  365 (392)
                                    ....+.+++..|++.+|++||++.+|++.|++.
T Consensus       232 ~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~~  278 (296)
T 4hgt_A          232 EKKMSTPIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNL  278 (296)
T ss_dssp             HHHHHSCHHHHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHH
T ss_pred             cccccchhhhhhccCCHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHH
Confidence                          023567788899999999999999999999875

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...

Probab=99.85  E-value=5e-22  Score=188.68  Aligned_cols=177  Identities=18%  Similarity=0.228  Sum_probs=129.1

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhc---------cccchhhhhHHHHHHHhhhhcCcCCCCceeecc
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFEC---------SKYSSYVTNILYGIARVILYLPEDSRLEIIHRD  255 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~---------~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrD  255 (392)
                      |++.++.......++..|++|||++++++.........         ......++.++.|++.||.|||++   +|+|||
T Consensus        87 h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~d  163 (322)
T 1p4o_A           87 CHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRD  163 (322)
T ss_dssp             CTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSC
T ss_pred             CCCEeeeEEEEccCCccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHC---CCccCC
Confidence            55555555544445678999999999999875543221         124455788999999999999998   899999


Q ss_pred             cccceeEEcCCCCCeEeeeeceEEeCCCC-cceeceeeecccccCchhHH------HHHHHhcCCCcc-eeec-ccccCC
Q 045577          256 HKTSNVLLDAEINPNISDFGPARIFGDQT-EEVTGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIID-EQTKMK  326 (392)
Q Consensus       256 lKp~NIll~~~~~~kl~DFGla~~~~~~~-~~~~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld-~~~~~~  326 (392)
                      |||+||+++.++.+||+|||+++...... ........+++.|+| ||..      .+.|+|+.|+++ +++. +...+.
T Consensus       164 ikp~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~a-PE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~  242 (322)
T 1p4o_A          164 LAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMS-PESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQ  242 (322)
T ss_dssp             CSGGGEEECTTCCEEECCTTCCCGGGGGGCEEGGGSSEECGGGCC-HHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTT
T ss_pred             CccceEEEcCCCeEEECcCccccccccccccccccCCCCCCCccC-hhhhccCCCCchhhHHHHHHHHHHHHhcCCCccc
Confidence            99999999999999999999987543211 112223467889999 7765      368999999877 4554 322322


Q ss_pred             CCCC----------------HHHHHHHHHHHHhhcccCcCCCCCHHHHHHHHccC
Q 045577          327 GPFS----------------ADELVKCIEVGLLCVQQRIEDWPTMSSVLTMLSNE  365 (392)
Q Consensus       327 ~~~~----------------~~~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~L~~~  365 (392)
                      +...                ......+.+++..|++.+|++||++.++++.|+..
T Consensus       243 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~~L~~~  297 (322)
T 1p4o_A          243 GLSNEQVLRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEE  297 (322)
T ss_dssp             TSCHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGG
T ss_pred             cCCHHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHh
Confidence            2111                11123466788899999999999999999999875

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7

Probab=99.85  E-value=1.8e-22  Score=205.66  Aligned_cols=182  Identities=15%  Similarity=0.202  Sum_probs=134.3

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhh-ccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEE
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFE-CSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLL  263 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~-~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll  263 (392)
                      |++.++.... |.++..|+||||++++++........ .......++.++.||+.||.|||++   +|+||||||+|||+
T Consensus       321 hpniv~~~~~-~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll  396 (535)
T 2h8h_A          321 HEKLVQLYAV-VSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILV  396 (535)
T ss_dssp             CTTBCCEEEE-ECSSSCEEEECCCTTEEHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEE
T ss_pred             CCCEeeEEEE-EeeccceEeeehhcCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHhhEEE
Confidence            7777777654 34578999999999999887654322 2234555889999999999999998   89999999999999


Q ss_pred             cCCCCCeEeeeeceEEeCCCCcceeceeeecccccCchhHH------HHHHHhcCCCcc-eeec-ccccCCCCCC-----
Q 045577          264 DAEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIID-EQTKMKGPFS-----  330 (392)
Q Consensus       264 ~~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld-~~~~~~~~~~-----  330 (392)
                      +.++.+||+|||+++..............++..|+| ||..      .+.|+|++|+++ +++. +...+.+...     
T Consensus       397 ~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~y~a-PE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~~~~~~~~  475 (535)
T 2h8h_A          397 GENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTA-PEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLD  475 (535)
T ss_dssp             CGGGCEEECCTTSTTTCCCHHHHTTCSTTSCGGGSC-HHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTCCHHHHHH
T ss_pred             cCCCcEEEcccccceecCCCceecccCCcCcccccC-HHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHH
Confidence            999999999999997653211111122346778999 7755      378999999977 5555 4333322211     


Q ss_pred             -----------HHHHHHHHHHHHhhcccCcCCCCCHHHHHHHHccCCCCCCC
Q 045577          331 -----------ADELVKCIEVGLLCVQQRIEDWPTMSSVLTMLSNESIKVPQ  371 (392)
Q Consensus       331 -----------~~~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~L~~~~~~~~~  371 (392)
                                 ......+.+++..||+.||++||++.+|+++|+........
T Consensus       476 ~i~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~~~~~~~  527 (535)
T 2h8h_A          476 QVERGYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTEP  527 (535)
T ss_dssp             HHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSCCCSC
T ss_pred             HHHcCCCCCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHhhccCc
Confidence                       11223466788899999999999999999999987444433

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...

Probab=99.85  E-value=4e-22  Score=186.19  Aligned_cols=177  Identities=17%  Similarity=0.198  Sum_probs=132.5

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhc-cccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEE
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFEC-SKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLL  263 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~-~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll  263 (392)
                      |++.++.......++..|++|||++++++.....+... ......+..++.|++.||.|||+.   +++||||||+||++
T Consensus        68 h~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dikp~Nil~  144 (288)
T 3kfa_A           68 HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLV  144 (288)
T ss_dssp             CTTBCCEEEEECSSSSEEEEEECCTTEEHHHHHHHCCTTTSCHHHHHHHHHHHHHHHHHHHHH---TCCCSCCSGGGEEE
T ss_pred             CCCEeeEEEEEccCCCEEEEEEcCCCCcHHHHHHhcccCCccHhHHHHHHHHHHHHHHHHHHC---CccCCCCCcceEEE
Confidence            56666655554445678999999999888775544222 234555788999999999999998   89999999999999


Q ss_pred             cCCCCCeEeeeeceEEeCCCCcceeceeeecccccCchhHHH------HHHHhcCCCcc-eeec-ccccCCCCC------
Q 045577          264 DAEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELLQ------AWKLWSEGDPM-EIID-EQTKMKGPF------  329 (392)
Q Consensus       264 ~~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~~------~~diws~G~v~-~~ld-~~~~~~~~~------  329 (392)
                      +.++.+||+|||+++..............+++.|+| ||...      +.|+|+.|+++ +++. +...+....      
T Consensus       145 ~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~~y~a-PE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~~~~~~~~  223 (288)
T 3kfa_A          145 GENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTA-PESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYE  223 (288)
T ss_dssp             CGGGCEEECCCCGGGTSCSSSSEEETTEEECGGGCC-HHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHH
T ss_pred             cCCCCEEEccCccceeccCCccccccCCccccCcCC-hhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHH
Confidence            999999999999997665433334444677889999 77653      78999999876 4554 332322211      


Q ss_pred             ----------CHHHHHHHHHHHHhhcccCcCCCCCHHHHHHHHccC
Q 045577          330 ----------SADELVKCIEVGLLCVQQRIEDWPTMSSVLTMLSNE  365 (392)
Q Consensus       330 ----------~~~~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~L~~~  365 (392)
                                +......+.+++..|++.||++||++.++++.|+..
T Consensus       224 ~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~~~~l~~~  269 (288)
T 3kfa_A          224 LLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM  269 (288)
T ss_dssp             HHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             HHhccCCCCCCCCCCHHHHHHHHHHhCCChhhCcCHHHHHHHHHHH
Confidence                      111223566788899999999999999999999764

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A

Probab=99.85  E-value=2.1e-22  Score=188.52  Aligned_cols=170  Identities=22%  Similarity=0.283  Sum_probs=119.4

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEc
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLD  264 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~  264 (392)
                      |++.++........+..|++|||+++ ++...............+..++.|++.||.|||++   +|+||||||+||+++
T Consensus        59 h~~iv~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~  134 (288)
T 1ob3_A           59 HSNIVKLYDVIHTKKRLVLVFEHLDQ-DLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDR---RVLHRDLKPQNLLIN  134 (288)
T ss_dssp             CTTBCCEEEEEECSSCEEEEEECCSE-EHHHHHHTSTTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEC
T ss_pred             CCCEeeeeeEEccCCeEEEEEEecCC-CHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEc
Confidence            55555555544445679999999985 55443322222234555788999999999999998   899999999999999


Q ss_pred             CCCCCeEeeeeceEEeCCCCcceeceeeecccccCchhHH-------HHHHHhcCCCcc-eeecccccCCCCCCHHH---
Q 045577          265 AEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELL-------QAWKLWSEGDPM-EIIDEQTKMKGPFSADE---  333 (392)
Q Consensus       265 ~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~-------~~~diws~G~v~-~~ld~~~~~~~~~~~~~---  333 (392)
                      .++.+||+|||+++....... ......||+.|+| ||+.       .+.|+|+.|+++ +++.+.+.+.+....+.   
T Consensus       135 ~~~~~kl~Dfg~~~~~~~~~~-~~~~~~~t~~y~a-PE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~  212 (288)
T 1ob3_A          135 REGELKIADFGLARAFGIPVR-KYTHEIVTLWYRA-PDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMR  212 (288)
T ss_dssp             TTSCEEECCTTHHHHHCC----------CCCTTCC-HHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHH
T ss_pred             CCCCEEEeECccccccCcccc-ccccccccccccC-chheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHH
Confidence            999999999999876542211 2223578999999 7654       368999999876 55555444333221111   


Q ss_pred             -----------------------------------------HHHHHHHHHhhcccCcCCCCCHHHHHH
Q 045577          334 -----------------------------------------LVKCIEVGLLCVQQRIEDWPTMSSVLT  360 (392)
Q Consensus       334 -----------------------------------------~~~~~~i~~~Cl~~dp~~RPsm~eVv~  360 (392)
                                                               ...+.+++..|++.||++|||+.++++
T Consensus       213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~  280 (288)
T 1ob3_A          213 IFRILGTPNSKNWPNVTELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALE  280 (288)
T ss_dssp             HHHHHCCCCTTTSTTGGGSTTCCTTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             HHHHHCCCChhhchhhhcccccccccccccCccHHHHhhhcCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence                                                     123457888999999999999999875

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*

Probab=99.85  E-value=6e-22  Score=188.82  Aligned_cols=170  Identities=15%  Similarity=0.221  Sum_probs=126.9

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEc
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLD  264 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~  264 (392)
                      |++.++.......++..|++|||++++++.....+  ....+..+..++.|++.||.|||+.   +|+||||||+||+++
T Consensus       101 h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~--~~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~  175 (321)
T 2c30_A          101 HFNVVEMYKSYLVGEELWVLMEFLQGGALTDIVSQ--VRLNEEQIATVCEAVLQALAYLHAQ---GVIHRDIKSDSILLT  175 (321)
T ss_dssp             CTTBCCEEEEEEETTEEEEEECCCCSCBHHHHHTT--CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEC
T ss_pred             CCCcceEEEEEEECCEEEEEEecCCCCCHHHHHHh--cCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEC
Confidence            45555544443335678999999999998765432  2244555889999999999999998   899999999999999


Q ss_pred             CCCCCeEeeeeceEEeCCCCcceeceeeecccccCchhHH------HHHHHhcCCCcc-eeecccccCCCCCCH------
Q 045577          265 AEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIIDEQTKMKGPFSA------  331 (392)
Q Consensus       265 ~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld~~~~~~~~~~~------  331 (392)
                      .++.+||+|||+++....... ......||+.|+| ||..      .+.|+|+.|+++ +++.+..++......      
T Consensus       176 ~~~~~kl~Dfg~~~~~~~~~~-~~~~~~gt~~y~a-PE~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~  253 (321)
T 2c30_A          176 LDGRVKLSDFGFCAQISKDVP-KRKSLVGTPYWMA-PEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKRL  253 (321)
T ss_dssp             TTCCEEECCCTTCEECCSSSC-CBCCCCSCGGGCC-HHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHH
T ss_pred             CCCcEEEeeeeeeeecccCcc-ccccccCCccccC-HhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH
Confidence            999999999999987653222 2234679999999 7765      378999999876 555554443322111      


Q ss_pred             ------------HHHHHHHHHHHhhcccCcCCCCCHHHHHHH
Q 045577          332 ------------DELVKCIEVGLLCVQQRIEDWPTMSSVLTM  361 (392)
Q Consensus       332 ------------~~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~  361 (392)
                                  .....+.+++..|++.||++||++.++++.
T Consensus       254 ~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h  295 (321)
T 2c30_A          254 RDSPPPKLKNSHKVSPVLRDFLERMLVRDPQERATAQELLDH  295 (321)
T ss_dssp             HHSSCCCCTTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred             hcCCCCCcCccccCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence                        112245678889999999999999999874

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}

Probab=99.85  E-value=3.4e-22  Score=206.88  Aligned_cols=176  Identities=21%  Similarity=0.204  Sum_probs=130.3

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEc
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLD  264 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~  264 (392)
                      |++.++.... |..+..|+||||++++++...............+..++.||+.||.|||++   +|+||||||+|||++
T Consensus       395 hpniv~l~~~-~~~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~~L~~LH~~---~iiHrDlkp~NILl~  470 (613)
T 2ozo_A          395 NPYIVRLIGV-CQAEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEK---NFVHRNLAARNVLLV  470 (613)
T ss_dssp             CTTBCCEEEE-EESSSEEEEEECCTTCBHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEE
T ss_pred             CCCEeeEEEE-eccCCeEEEEEeCCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHC---CEEcCcCCHHHEEEc
Confidence            7787777665 345679999999999999876544333345556889999999999999998   899999999999999


Q ss_pred             CCCCCeEeeeeceEEeCCCCcce--eceeeecccccCchhHH------HHHHHhcCCCcc-eeec-ccccCCCCCCHH--
Q 045577          265 AEINPNISDFGPARIFGDQTEEV--TGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIID-EQTKMKGPFSAD--  332 (392)
Q Consensus       265 ~~~~~kl~DFGla~~~~~~~~~~--~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld-~~~~~~~~~~~~--  332 (392)
                      .++.+||+|||+++.........  .....+++.|+| ||+.      .+.|+|++|+++ +++. +..++.+....+  
T Consensus       471 ~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~y~A-PE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~~~  549 (613)
T 2ozo_A          471 NRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYA-PECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVM  549 (613)
T ss_dssp             ETTEEEECCCSTTTTCC--------------CCTTSC-HHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCSHHHH
T ss_pred             CCCcEEEeeccCcccccCCCceeeeccCCCCccceeC-HhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHH
Confidence            99999999999997654222111  122345688999 7765      378999999976 5665 544443322221  


Q ss_pred             --------------HHHHHHHHHHhhcccCcCCCCCHHHHHHHHccC
Q 045577          333 --------------ELVKCIEVGLLCVQQRIEDWPTMSSVLTMLSNE  365 (392)
Q Consensus       333 --------------~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~L~~~  365 (392)
                                    ....+.+++..||+.+|++||++.+|++.|+..
T Consensus       550 ~~i~~~~~~~~p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~  596 (613)
T 2ozo_A          550 AFIEQGKRMECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRAC  596 (613)
T ss_dssp             HHHHTTCCCCCCTTCCHHHHHHHHHTTCSSTTTSCCHHHHHHHHHHH
T ss_pred             HHHHcCCCCCCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHH
Confidence                          224567788899999999999999999999864

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}

Probab=99.85  E-value=6.2e-22  Score=189.09  Aligned_cols=170  Identities=19%  Similarity=0.184  Sum_probs=127.0

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEc
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLD  264 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~  264 (392)
                      |++.++........+..|++|||++++++.....+... .....+..++.|++.||.|||+.   +|+||||||+||+++
T Consensus        73 hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~-~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~NIll~  148 (326)
T 2y0a_A           73 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES-LTEEEATEFLKQILNGVYYLHSL---QIAHFDLKPENIMLL  148 (326)
T ss_dssp             CTTBCCEEEEEECSSEEEEEEECCCSCBHHHHHTTSSC-CBHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEES
T ss_pred             CCCCCcEEEEEEeCCEEEEEEEcCCCCCHHHHHHhcCC-cCHHHHHHHHHHHHHHHHHHHHC---CeEcCCCCHHHEEEe
Confidence            45555554444445678999999999998776544332 34455889999999999999998   899999999999998


Q ss_pred             CCC----CCeEeeeeceEEeCCCCcceeceeeecccccCchhHH------HHHHHhcCCCcc-eeecccccCCCCCCHHH
Q 045577          265 AEI----NPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIIDEQTKMKGPFSADE  333 (392)
Q Consensus       265 ~~~----~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld~~~~~~~~~~~~~  333 (392)
                      .++    .+||+|||+++......  ......||+.|+| ||+.      ...|+|+.|+++ +++.+..++.+....+.
T Consensus       149 ~~~~~~~~~kl~Dfg~a~~~~~~~--~~~~~~gt~~y~a-PE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~  225 (326)
T 2y0a_A          149 DRNVPKPRIKIIDFGLAHKIDFGN--EFKNIFGTPEFVA-PEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQET  225 (326)
T ss_dssp             CSSSSSCCEEECCCTTCEECCTTS--CCCCCCSCTTTCC-HHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHH
T ss_pred             cCCCCCCCEEEEECCCCeECCCCC--ccccccCCcCcCC-ceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHH
Confidence            877    79999999998865322  2233579999999 7765      378999999876 56655444433222111


Q ss_pred             -------------------HHHHHHHHHhhcccCcCCCCCHHHHHHH
Q 045577          334 -------------------LVKCIEVGLLCVQQRIEDWPTMSSVLTM  361 (392)
Q Consensus       334 -------------------~~~~~~i~~~Cl~~dp~~RPsm~eVv~~  361 (392)
                                         ...+.+++..|++.||++|||+.++++.
T Consensus       226 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h  272 (326)
T 2y0a_A          226 LANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQH  272 (326)
T ss_dssp             HHHHHHTCCCCCHHHHTTSCHHHHHHHHHHSCSSGGGSCCHHHHHHS
T ss_pred             HHHHHhcCCCcCccccccCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence                               1245578889999999999999999873

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}

Probab=99.85  E-value=7.6e-22  Score=191.22  Aligned_cols=173  Identities=13%  Similarity=0.031  Sum_probs=126.7

Q ss_pred             CCccccccCcCCCCCeeEEecCccCCCcChhhhhh----hccccchhhhhHHHHHHHhhhhcCcCCCCceeeccccccee
Q 045577          186 GGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEF----ECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNV  261 (392)
Q Consensus       186 ~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~----~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NI  261 (392)
                      ++.++.......++..|+||||++++++.......    .....+..+..|+.|++.||.|||+.   +|+||||||+||
T Consensus       127 ~~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~---~ivHrDiKp~NI  203 (365)
T 3e7e_A          127 HMFMKFYSAHLFQNGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDC---EIIHGDIKPDNF  203 (365)
T ss_dssp             GGBCCEEEEEECSSCEEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGE
T ss_pred             hhhhhhheeeecCCCcEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhhC---CeecCCCCHHHE
Confidence            34444444434467889999999999998765432    12235556899999999999999998   899999999999


Q ss_pred             EEcC-----------CCCCeEeeeeceEEeC-CCCcceeceeeecccccCchhHH------HHHHHhcCCCcc-eeeccc
Q 045577          262 LLDA-----------EINPNISDFGPARIFG-DQTEEVTGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIIDEQ  322 (392)
Q Consensus       262 ll~~-----------~~~~kl~DFGla~~~~-~~~~~~~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld~~  322 (392)
                      |++.           ++.+||+|||+++.+. ...........||+.|+| ||+.      .+.|+|+.|+++ +++.++
T Consensus       204 ll~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~a-PE~~~~~~~~~~~DiwslG~il~elltg~  282 (365)
T 3e7e_A          204 ILGNGFLEQDDEDDLSAGLALIDLGQSIDMKLFPKGTIFTAKCETSGFQC-VEMLSNKPWNYQIDYFGVAATVYCMLFGT  282 (365)
T ss_dssp             EECGGGTCC------CTTEEECCCTTCEEGGGSCTTEEECCSSCTTSCCC-HHHHTTCCBSTHHHHHHHHHHHHHHHHSS
T ss_pred             EecccccCccccccccCCEEEeeCchhhhhhccCCCceeeeecCCCCCCC-hHHhcCCCCCccccHHHHHHHHHHHHhCC
Confidence            9998           8999999999998765 222333444679999999 7765      478999999976 455443


Q ss_pred             ccC--------------CCCCCHHHHHHHHHHHHhhcccCcCCC-CCHHHHHHHHccC
Q 045577          323 TKM--------------KGPFSADELVKCIEVGLLCVQQRIEDW-PTMSSVLTMLSNE  365 (392)
Q Consensus       323 ~~~--------------~~~~~~~~~~~~~~i~~~Cl~~dp~~R-Psm~eVv~~L~~~  365 (392)
                      ..+              ......+   .+.++...|++.+|.+| |++.++.+.|+..
T Consensus       283 ~pf~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~l~~~p~~r~~~~~~l~~~l~~~  337 (365)
T 3e7e_A          283 YMKVKNEGGECKPEGLFRRLPHLD---MWNEFFHVMLNIPDCHHLPSLDLLRQKLKKV  337 (365)
T ss_dssp             CCCEEEETTEEEECSCCTTCSSHH---HHHHHHHHHHCCCCTTCCCCHHHHHHHHHHH
T ss_pred             CccccCCCCceeechhccccCcHH---HHHHHHHHHcCCCCCCcchHHHHHHHHHHHH
Confidence            221              1112233   34455668999999998 6788888888764

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}

Probab=99.85  E-value=1.5e-21  Score=195.93  Aligned_cols=169  Identities=18%  Similarity=0.269  Sum_probs=130.2

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEc
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLD  264 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~  264 (392)
                      |++.++........+..|+||||++++++.....+... .....+..++.||+.||.|||+.   +|+||||||+||+++
T Consensus        75 HpnIv~l~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~-l~~~~~~~i~~qi~~aL~~LH~~---givHrDLkp~NIll~  150 (476)
T 2y94_A           75 HPHIIKLYQVISTPSDIFMVMEYVSGGELFDYICKNGR-LDEKESRRLFQQILSGVDYCHRH---MVVHRDLKPENVLLD  150 (476)
T ss_dssp             CTTBCCEEEEEECSSEEEEEEECCSSEEHHHHTTSSSS-CCHHHHHHHHHHHHHHHHHHHTT---TEECSCCSGGGEEEC
T ss_pred             CCCCCcEEEEEEECCEEEEEEeCCCCCcHHHHHHhcCC-CCHHHHHHHHHHHHHHHHHHHHC---CCCcccccHHHEEEe
Confidence            66666665555445779999999999998776654332 34455788999999999999998   899999999999999


Q ss_pred             CCCCCeEeeeeceEEeCCCCcceeceeeecccccCchhHH-------HHHHHhcCCCcc-eeecccccCCCCCCHHH---
Q 045577          265 AEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELL-------QAWKLWSEGDPM-EIIDEQTKMKGPFSADE---  333 (392)
Q Consensus       265 ~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~-------~~~diws~G~v~-~~ld~~~~~~~~~~~~~---  333 (392)
                      .++.+||+|||+++......  ......||+.|+| ||+.       .+.|+|+.|+++ +++.+..++.+......   
T Consensus       151 ~~~~vkL~DFG~a~~~~~~~--~~~~~~gt~~y~a-PE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~  227 (476)
T 2y94_A          151 AHMNAKIADFGLSNMMSDGE--FLRTSCGSPNYAA-PEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVPTLFKK  227 (476)
T ss_dssp             TTCCEEECCCSSCEECCTTC--CBCCCCSCSTTCC-HHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCSSSHHHHHH
T ss_pred             cCCCeEEEeccchhhccccc--cccccCCCcCeEC-hhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCCCHHHHHHH
Confidence            99999999999998865322  2234579999999 7754       478999999877 55555444443322221   


Q ss_pred             ------------HHHHHHHHHhhcccCcCCCCCHHHHHH
Q 045577          334 ------------LVKCIEVGLLCVQQRIEDWPTMSSVLT  360 (392)
Q Consensus       334 ------------~~~~~~i~~~Cl~~dp~~RPsm~eVv~  360 (392)
                                  ...+.+++..|++.||++|||+.++++
T Consensus       228 i~~~~~~~p~~~s~~~~~Li~~~L~~dP~~Rpt~~eil~  266 (476)
T 2y94_A          228 ICDGIFYTPQYLNPSVISLLKHMLQVDPMKRATIKDIRE  266 (476)
T ss_dssp             HHTTCCCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             HhcCCcCCCccCCHHHHHHHHHHcCCCchhCcCHHHHHh
Confidence                        124567888999999999999999987

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7

Probab=99.85  E-value=3.7e-22  Score=187.18  Aligned_cols=179  Identities=16%  Similarity=0.122  Sum_probs=130.9

Q ss_pred             CCCccccccCcCCCCC-eeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEE
Q 045577          185 SGGCKRNWEADCGDGE-VFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLL  263 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~-~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll  263 (392)
                      |++.++........+. .+++|||+.++++...............+..++.|++.||.|||+.   +++||||||+||++
T Consensus        81 h~~iv~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dikp~Nili  157 (298)
T 3pls_A           81 HPNVLALIGIMLPPEGLPHVLLPYMCHGDLLQFIRSPQRNPTVKDLISFGLQVARGMEYLAEQ---KFVHRDLAARNCML  157 (298)
T ss_dssp             CTTBCCCCEEECCSSSCCEEEECCCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEE
T ss_pred             CCCeeeEEEEEecCCCCcEEEEecccCCCHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCcceEEE
Confidence            6777766655443333 4999999999998776554333345556789999999999999998   89999999999999


Q ss_pred             cCCCCCeEeeeeceEEeCCCC---cceeceeeecccccCchhHH------HHHHHhcCCCcc-eeecccccCCCCCC---
Q 045577          264 DAEINPNISDFGPARIFGDQT---EEVTGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIIDEQTKMKGPFS---  330 (392)
Q Consensus       264 ~~~~~~kl~DFGla~~~~~~~---~~~~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld~~~~~~~~~~---  330 (392)
                      +.++.+||+|||+++......   ........+++.|+| ||..      .+.|+|+.|+++ +++.+...+.....   
T Consensus       158 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~y~a-PE~~~~~~~~~~~Di~slG~il~~l~~g~~~~~~~~~~~~  236 (298)
T 3pls_A          158 DESFTVKVADFGLARDILDREYYSVQQHRHARLPVKWTA-LESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDPFD  236 (298)
T ss_dssp             CTTCCEEECCTTSSCTTTTGGGGCSCCSSCTTCGGGGSC-HHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCGGG
T ss_pred             cCCCcEEeCcCCCcccccCCcccccccCcCCCCCccccC-hhhhccCCCChhhchhhHHHHHHHHhhCCCCCCccCCHHH
Confidence            999999999999997543211   112223467889999 6654      478999999876 45442222211111   


Q ss_pred             --------------HHHHHHHHHHHHhhcccCcCCCCCHHHHHHHHccCCC
Q 045577          331 --------------ADELVKCIEVGLLCVQQRIEDWPTMSSVLTMLSNESI  367 (392)
Q Consensus       331 --------------~~~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~L~~~~~  367 (392)
                                    ......+.+++..|++.+|.+|||+.++++.|+....
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~l~~~~~  287 (298)
T 3pls_A          237 LTHFLAQGRRLPQPEYCPDSLYQVMQQCWEADPAVRPTFRVLVGEVEQIVS  287 (298)
T ss_dssp             HHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             HHHHhhcCCCCCCCccchHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHH
Confidence                          1112356678889999999999999999999987533

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*

Probab=99.85  E-value=8.5e-22  Score=184.01  Aligned_cols=170  Identities=17%  Similarity=0.174  Sum_probs=126.9

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCc--eeecccccceeE
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLE--IIHRDHKTSNVL  262 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~--iiHrDlKp~NIl  262 (392)
                      |++.++......  ...+++|||++++++.....+.........+..++.|++.||.|||+.   +  ++||||||+||+
T Consensus        82 h~~i~~~~~~~~--~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~~~ivH~dikp~Nil  156 (287)
T 4f0f_A           82 HPNIVKLYGLMH--NPPRMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQNQ---NPPIVHRDLRSPNIF  156 (287)
T ss_dssp             CTTBCCEEEEET--TTTEEEEECCTTCBHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHTS---SSCCBCSCCSGGGEE
T ss_pred             CCCchhhheeec--CCCeEEEEecCCCCHHHHHhcccCCccHHHHHHHHHHHHHHHHHHHhC---CCCeecCCCCcceEE
Confidence            555555544432  344899999999998776555544455666889999999999999998   7  999999999999


Q ss_pred             EcCCCC-----CeEeeeeceEEeCCCCcceeceeeecccccCchhHH--------HHHHHhcCCCcc-eeecccccCCCC
Q 045577          263 LDAEIN-----PNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELL--------QAWKLWSEGDPM-EIIDEQTKMKGP  328 (392)
Q Consensus       263 l~~~~~-----~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~--------~~~diws~G~v~-~~ld~~~~~~~~  328 (392)
                      ++.++.     +||+|||+++....    ......||+.|+| ||..        .+.|+|+.|+++ +++.+..++...
T Consensus       157 ~~~~~~~~~~~~kl~Dfg~~~~~~~----~~~~~~g~~~y~a-PE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~  231 (287)
T 4f0f_A          157 LQSLDENAPVCAKVADFGLSQQSVH----SVSGLLGNFQWMA-PETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEY  231 (287)
T ss_dssp             ESCCCTTCSCCEEECCCTTCBCCSS----CEECCCCCCTTSC-GGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTC
T ss_pred             EeccCCCCceeEEeCCCCccccccc----cccccCCCccccC-chhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCccc
Confidence            987776     89999999875322    2233578999999 6653        578999999876 455543333221


Q ss_pred             C-------------------CHHHHHHHHHHHHhhcccCcCCCCCHHHHHHHHcc
Q 045577          329 F-------------------SADELVKCIEVGLLCVQQRIEDWPTMSSVLTMLSN  364 (392)
Q Consensus       329 ~-------------------~~~~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~L~~  364 (392)
                      .                   +......+.+++..|++.||++||++.++++.|++
T Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~  286 (287)
T 4f0f_A          232 SYGKIKFINMIREEGLRPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKELSE  286 (287)
T ss_dssp             CCCHHHHHHHHHHSCCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHT
T ss_pred             cccHHHHHHHHhccCCCCCCCcccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHh
Confidence            1                   11122356778889999999999999999999975

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7

Probab=99.85  E-value=7.9e-22  Score=193.04  Aligned_cols=171  Identities=15%  Similarity=0.129  Sum_probs=129.6

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEc
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLD  264 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~  264 (392)
                      |++.++........+..|++|||++++++............+..+..++.|++.||.|||+.   +|+||||||+||+++
T Consensus       107 hpnIv~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~  183 (387)
T 1kob_A          107 HPKLINLHDAFEDKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEH---SIVHLDIKPENIMCE  183 (387)
T ss_dssp             STTBCCEEEEEECSSEEEEEEECCCCCBHHHHTTCTTCCBCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEES
T ss_pred             CcCCCeEEEEEEeCCEEEEEEEcCCCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccchHHeEEe
Confidence            66666665555556779999999999998775544433345566889999999999999998   899999999999997


Q ss_pred             C--CCCCeEeeeeceEEeCCCCcceeceeeecccccCchhHH------HHHHHhcCCCcc-eeecccccCCCCCCHH---
Q 045577          265 A--EINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIIDEQTKMKGPFSAD---  332 (392)
Q Consensus       265 ~--~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld~~~~~~~~~~~~---  332 (392)
                      .  .+.+||+|||+++......  ......||+.|+| ||+.      ...|+|+.|+++ +++.+..++.+....+   
T Consensus       184 ~~~~~~vkL~DFG~a~~~~~~~--~~~~~~gt~~y~a-PE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~  260 (387)
T 1kob_A          184 TKKASSVKIIDFGLATKLNPDE--IVKVTTATAEFAA-PEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQ  260 (387)
T ss_dssp             STTCCCEEECCCTTCEECCTTS--CEEEECSSGGGCC-HHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHH
T ss_pred             cCCCCceEEEecccceecCCCc--ceeeeccCCCccC-chhccCCCCCCcccEeeHhHHHHHHHhCCCCCCCCCHHHHHH
Confidence            4  4679999999999865322  2233579999999 7765      478999999876 5555544443322111   


Q ss_pred             ----------------HHHHHHHHHHhhcccCcCCCCCHHHHHHH
Q 045577          333 ----------------ELVKCIEVGLLCVQQRIEDWPTMSSVLTM  361 (392)
Q Consensus       333 ----------------~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~  361 (392)
                                      ....+.+++..|++.||++||++.++++.
T Consensus       261 ~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~h  305 (387)
T 1kob_A          261 NVKRCDWEFDEDAFSSVSPEAKDFIKNLLQKEPRKRLTVHDALEH  305 (387)
T ss_dssp             HHHHCCCCCCSSTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred             HHHhCCCCCCccccccCCHHHHHHHHHHcCCChhHCcCHHHHhhC
Confidence                            12346678889999999999999999874

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}

Probab=99.85  E-value=4.3e-22  Score=194.63  Aligned_cols=170  Identities=22%  Similarity=0.341  Sum_probs=121.7

Q ss_pred             CCCccccccCcC--CCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeE
Q 045577          185 SGGCKRNWEADC--GDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVL  262 (392)
Q Consensus       185 s~GCvR~~~l~C--~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIl  262 (392)
                      |++.++......  .....|+||||+++ ++......  .......+..++.|+++||.|||+.   +|+||||||+|||
T Consensus        68 h~niv~l~~~~~~~~~~~~~lv~e~~~~-~L~~~~~~--~~~~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIl  141 (388)
T 3oz6_A           68 HENIVNLLNVLRADNDRDVYLVFDYMET-DLHAVIRA--NILEPVHKQYVVYQLIKVIKYLHSG---GLLHRDMKPSNIL  141 (388)
T ss_dssp             CTTBCCEEEEEECTTSSCEEEEEECCSE-EHHHHHHH--TCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEE
T ss_pred             CCCCCeeeeEEecCCCCEEEEEecccCc-CHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCCCHHHeE
Confidence            455555444332  12468999999984 55443322  2234444778999999999999998   8999999999999


Q ss_pred             EcCCCCCeEeeeeceEEeCCC--------------------CcceeceeeecccccCchhHH-------HHHHHhcCCCc
Q 045577          263 LDAEINPNISDFGPARIFGDQ--------------------TEEVTGRVIGTQTLKTVPELL-------QAWKLWSEGDP  315 (392)
Q Consensus       263 l~~~~~~kl~DFGla~~~~~~--------------------~~~~~~~~~gt~~y~a~~~~~-------~~~diws~G~v  315 (392)
                      ++.++.+||+|||+++.+...                    .........||+.|+| ||+.       .+.|+|+.|++
T Consensus       142 l~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~a-PE~~~~~~~~~~~~DiwSlG~i  220 (388)
T 3oz6_A          142 LNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRA-PEILLGSTKYTKGIDMWSLGCI  220 (388)
T ss_dssp             ECTTCCEEECCCTTCEESSSCCCCCCCGGGCCC---------------CCCGGGGCC-HHHHTTCCCCCTHHHHHHHHHH
T ss_pred             EcCCCCEEecCCcccccccccccccccccccccccccccccccccccCCcccCCcCC-HHHhcCCCCCCChhhHHHHHHH
Confidence            999999999999999876421                    0112233579999999 7765       36899999998


Q ss_pred             c-eeecccccCCCCCCHHHH------------------------------------------------------------
Q 045577          316 M-EIIDEQTKMKGPFSADEL------------------------------------------------------------  334 (392)
Q Consensus       316 ~-~~ld~~~~~~~~~~~~~~------------------------------------------------------------  334 (392)
                      + +++.+.+.+.+....+++                                                            
T Consensus       221 l~ell~g~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  300 (388)
T 3oz6_A          221 LGEILCGKPIFPGSSTMNQLERIIGVIDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKAD  300 (388)
T ss_dssp             HHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHHTSCCSSHHHHHHHHHHHCC-----CCCCHHHHHHHHHHHCTTCC
T ss_pred             HHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHhccCHHHHHHHHhCcccccccCCCHHHhCcchhhhccccccccc
Confidence            7 666665555443322221                                                            


Q ss_pred             --HHHHHHHHhhcccCcCCCCCHHHHHHH
Q 045577          335 --VKCIEVGLLCVQQRIEDWPTMSSVLTM  361 (392)
Q Consensus       335 --~~~~~i~~~Cl~~dp~~RPsm~eVv~~  361 (392)
                        ..+.+++..|++.||++|||+.|+++.
T Consensus       301 ~~~~~~dll~~~L~~dP~~R~t~~e~l~H  329 (388)
T 3oz6_A          301 CNEEALDLLDKLLQFNPNKRISANDALKH  329 (388)
T ss_dssp             CCHHHHHHHHHHCCSSGGGSCCHHHHTTS
T ss_pred             CCHHHHHHHHHhhccCcccCCCHHHHhCC
Confidence              245678889999999999999998876

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0

Probab=99.85  E-value=6.6e-22  Score=183.06  Aligned_cols=174  Identities=21%  Similarity=0.246  Sum_probs=121.0

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEc
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLD  264 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~  264 (392)
                      |++.++.......++..+++|||++++++......  .......+..++.|++.||.|||++...+++||||||+||+++
T Consensus        65 h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~--~~~~~~~~~~i~~~l~~~l~~lH~~~~~~i~H~dikp~Nil~~  142 (271)
T 3dtc_A           65 HPNIIALRGVCLKEPNLCLVMEFARGGPLNRVLSG--KRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILIL  142 (271)
T ss_dssp             CTTBCCEEEEECCC--CEEEEECCTTEEHHHHHTS--SCCCHHHHHHHHHHHHHHHHHHHHSSSSCCCCSCCSGGGEEES
T ss_pred             CCCEeeEEEEEecCCceEEEEEcCCCCCHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCchHHEEEe
Confidence            56666655554445678999999999888665432  2234555789999999999999998333399999999999998


Q ss_pred             C--------CCCCeEeeeeceEEeCCCCcceeceeeecccccCchhHH------HHHHHhcCCCcc-eeecccccCCCCC
Q 045577          265 A--------EINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIIDEQTKMKGPF  329 (392)
Q Consensus       265 ~--------~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld~~~~~~~~~  329 (392)
                      .        ++.+||+|||+++......   .....|++.|+| ||..      .+.|+|+.|+++ +++.++.++.+..
T Consensus       143 ~~~~~~~~~~~~~kl~Dfg~~~~~~~~~---~~~~~~~~~y~a-PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~  218 (271)
T 3dtc_A          143 QKVENGDLSNKILKITDFGLAREWHRTT---KMSAAGAYAWMA-PEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGID  218 (271)
T ss_dssp             SCCSSSCCSSCCEEECCCCC----------------CCGGGSC-HHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTTSC
T ss_pred             cccccccccCcceEEccCCccccccccc---ccCCCCccceeC-HHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence            6        6779999999998654221   223578999999 7754      468999999876 4555533332211


Q ss_pred             -----------------CHHHHHHHHHHHHhhcccCcCCCCCHHHHHHHHcc
Q 045577          330 -----------------SADELVKCIEVGLLCVQQRIEDWPTMSSVLTMLSN  364 (392)
Q Consensus       330 -----------------~~~~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~L~~  364 (392)
                                       +......+.+++..|++.+|++||++.++++.|+.
T Consensus       219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~L~~  270 (271)
T 3dtc_A          219 GLAVAYGVAMNKLALPIPSTCPEPFAKLMEDCWNPDPHSRPSFTNILDQLTT  270 (271)
T ss_dssp             HHHHHHHHHTSCCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHC
T ss_pred             HHHHHHhhhcCCCCCCCCcccCHHHHHHHHHHhcCCcccCcCHHHHHHHHhc
Confidence                             11222356778889999999999999999999975

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}

Probab=99.85  E-value=6.9e-22  Score=185.87  Aligned_cols=169  Identities=18%  Similarity=0.210  Sum_probs=124.6

Q ss_pred             CCCccccccCcCC--CCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeE
Q 045577          185 SGGCKRNWEADCG--DGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVL  262 (392)
Q Consensus       185 s~GCvR~~~l~C~--~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIl  262 (392)
                      |++.++.......  ++..|++|||++++++......  .......+..++.|++.||.|||+.   +|+||||||+||+
T Consensus        95 h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nil  169 (298)
T 2zv2_A           95 HPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTL--KPLSEDQARFYFQDLIKGIEYLHYQ---KIIHRDIKPSNLL  169 (298)
T ss_dssp             CTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSSCS--SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEE
T ss_pred             CCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEE
Confidence            6666665554322  3568999999999888764321  2234555788999999999999998   8999999999999


Q ss_pred             EcCCCCCeEeeeeceEEeCCCCcceeceeeecccccCchhH---------HHHHHHhcCCCcc-eeecccccCCCCCC--
Q 045577          263 LDAEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPEL---------LQAWKLWSEGDPM-EIIDEQTKMKGPFS--  330 (392)
Q Consensus       263 l~~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~---------~~~~diws~G~v~-~~ld~~~~~~~~~~--  330 (392)
                      ++.++.+||+|||+++...... .......||+.|+| ||.         ..+.|+|+.|+++ +++.+..++.....  
T Consensus       170 ~~~~~~~kl~Dfg~~~~~~~~~-~~~~~~~gt~~y~a-PE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~  247 (298)
T 2zv2_A          170 VGEDGHIKIADFGVSNEFKGSD-ALLSNTVGTPAFMA-PESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDERIMC  247 (298)
T ss_dssp             ECTTSCEEECCCTTCEECSSSS-CEECCCCSCGGGCC-GGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSCSSCCSSHHH
T ss_pred             ECCCCCEEEecCCCcccccccc-ccccCCcCCccccC-hhhhccCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCccHHH
Confidence            9999999999999998865322 22334579999999 664         3567999999876 55555433322111  


Q ss_pred             ---------------HHHHHHHHHHHHhhcccCcCCCCCHHHHHH
Q 045577          331 ---------------ADELVKCIEVGLLCVQQRIEDWPTMSSVLT  360 (392)
Q Consensus       331 ---------------~~~~~~~~~i~~~Cl~~dp~~RPsm~eVv~  360 (392)
                                     ......+.+++.+|++.||++||++.++++
T Consensus       248 ~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~R~s~~e~l~  292 (298)
T 2zv2_A          248 LHSKIKSQALEFPDQPDIAEDLKDLITRMLDKNPESRIVVPEIKL  292 (298)
T ss_dssp             HHHHHHHCCCCCCSSSCCCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred             HHHHHhcccCCCCCccccCHHHHHHHHHHhhcChhhCCCHHHHhc
Confidence                           111235667888999999999999999864

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}

Probab=99.85  E-value=9.1e-22  Score=187.65  Aligned_cols=171  Identities=17%  Similarity=0.229  Sum_probs=120.6

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEc
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLD  264 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~  264 (392)
                      |++.++.......++..++||||+++ ++...............+..++.|++.||.|||+.   +|+||||||+||+++
T Consensus        59 h~~iv~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~  134 (324)
T 3mtl_A           59 HANIVTLHDIIHTEKSLTLVFEYLDK-DLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCHRQ---KVLHRDLKPQNLLIN  134 (324)
T ss_dssp             CTTBCCEEEEEECSSCEEEEEECCSE-EHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHT---TEEESSCCGGGEEEC
T ss_pred             CCCCCeeeeEEeeCCEEEEEeccccc-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCcCHHHEEEC
Confidence            55555555544445778999999985 55444333333344555788999999999999998   899999999999999


Q ss_pred             CCCCCeEeeeeceEEeCCCCcceeceeeecccccCchhHH-------HHHHHhcCCCcc-eeecccccCCCCCCHHHH--
Q 045577          265 AEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELL-------QAWKLWSEGDPM-EIIDEQTKMKGPFSADEL--  334 (392)
Q Consensus       265 ~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~-------~~~diws~G~v~-~~ld~~~~~~~~~~~~~~--  334 (392)
                      .++.+||+|||+++...... .......||+.|+| ||+.       .+.|+|+.|+++ +++.+...+.+....+..  
T Consensus       135 ~~~~~kl~Dfg~a~~~~~~~-~~~~~~~~t~~y~a-PE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~  212 (324)
T 3mtl_A          135 ERGELKLADFGLARAKSIPT-KTYDNEVVTLWYRP-PDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHF  212 (324)
T ss_dssp             TTCCEEECSSSEEECC-------------CGGGCC-HHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHH
T ss_pred             CCCCEEEccCcccccccCCc-cccccccCcccccC-hhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHH
Confidence            99999999999998654221 12233578999999 7754       368999999976 566665444433222211  


Q ss_pred             -------------------------------------------HHHHHHHHhhcccCcCCCCCHHHHHHH
Q 045577          335 -------------------------------------------VKCIEVGLLCVQQRIEDWPTMSSVLTM  361 (392)
Q Consensus       335 -------------------------------------------~~~~~i~~~Cl~~dp~~RPsm~eVv~~  361 (392)
                                                                 ..+.+++..|++.||++|||+.|+++.
T Consensus       213 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h  282 (324)
T 3mtl_A          213 IFRILGTPTEETWPGILSNEEFKTYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMKH  282 (324)
T ss_dssp             HHHHHCCCCTTTSTTGGGCHHHHHTCCCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred             HHHHhCCCChHhchhhhcchhhcccccccccchhhhhhcCCCCHHHHHHHHHHcCcCcccCCCHHHHhcC
Confidence                                                       234678889999999999999999873

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*

Probab=99.85  E-value=2e-22  Score=194.27  Aligned_cols=169  Identities=19%  Similarity=0.144  Sum_probs=127.2

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEc
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLD  264 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~  264 (392)
                      |++.++........+..|+||||++++++.....+... .....+..++.|++.||.|||+.   +|+||||||+||+++
T Consensus        77 hp~iv~l~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~-~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~  152 (345)
T 1xjd_A           77 HPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHK-FDLSRATFYAAEIILGLQFLHSK---GIVYRDLKLDNILLD  152 (345)
T ss_dssp             CTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHHHSS-CCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEEC
T ss_pred             CCCCCcEEEEEEeCCEEEEEEeCCCCCcHHHHHHHcCC-CCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCChhhEEEC
Confidence            66666665554445679999999999999876544332 34445788999999999999998   899999999999999


Q ss_pred             CCCCCeEeeeeceEEeCCCCcceeceeeecccccCchhHH------HHHHHhcCCCcc-eeecccccCCCCCCHHH----
Q 045577          265 AEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIIDEQTKMKGPFSADE----  333 (392)
Q Consensus       265 ~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld~~~~~~~~~~~~~----  333 (392)
                      .++.+||+|||+++..... ........||+.|+| ||+.      .+.|+|+.|+++ +++.+..++.+....+.    
T Consensus       153 ~~g~vkL~DFG~a~~~~~~-~~~~~~~~gt~~y~a-PE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i  230 (345)
T 1xjd_A          153 KDGHIKIADFGMCKENMLG-DAKTNTFCGTPDYIA-PEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSI  230 (345)
T ss_dssp             TTSCEEECCCTTCBCCCCT-TCCBCCCCSCGGGCC-HHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHH
T ss_pred             CCCCEEEeEChhhhhcccC-CCcccCCCCCcccCC-hhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCCCCHHHHHHHH
Confidence            9999999999999754321 122344689999999 7765      378999999977 56666544443322111    


Q ss_pred             -----------HHHHHHHHHhhcccCcCCCCCHH-HHH
Q 045577          334 -----------LVKCIEVGLLCVQQRIEDWPTMS-SVL  359 (392)
Q Consensus       334 -----------~~~~~~i~~~Cl~~dp~~RPsm~-eVv  359 (392)
                                 ...+.+++..|++.||++||++. +|.
T Consensus       231 ~~~~~~~p~~~s~~~~~li~~lL~~dp~~R~~~~~~i~  268 (345)
T 1xjd_A          231 RMDNPFYPRWLEKEAKDLLVKLFVREPEKRLGVRGDIR  268 (345)
T ss_dssp             HHCCCCCCTTSCHHHHHHHHHHSCSSGGGSBTTBSCGG
T ss_pred             HhCCCCCCcccCHHHHHHHHHHhcCCHhHcCCChHHHH
Confidence                       13456788899999999999987 664

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*

Probab=99.85  E-value=6.7e-22  Score=187.98  Aligned_cols=171  Identities=19%  Similarity=0.252  Sum_probs=123.8

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhh-----ccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccc
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFE-----CSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTS  259 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~-----~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~  259 (392)
                      |++.++.......++..|++|||+++ ++........     .......+..++.|++.||.|||+.   +|+||||||+
T Consensus        62 hp~iv~~~~~~~~~~~~~lv~e~~~~-~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~---~ivH~Dlkp~  137 (317)
T 2pmi_A           62 HENIVRLYDVIHTENKLTLVFEFMDN-DLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHEN---KILHRDLKPQ  137 (317)
T ss_dssp             BTTBCCEEEEECCTTEEEEEEECCCC-BHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGG
T ss_pred             CCCcceEEEEEEECCeEEEEEEecCC-CHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCChH
Confidence            55666665555455678999999994 5554332221     1124445788899999999999998   8999999999


Q ss_pred             eeEEcCCCCCeEeeeeceEEeCCCCcceeceeeecccccCchhHH-------HHHHHhcCCCcc-eeecccccCCCCCCH
Q 045577          260 NVLLDAEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELL-------QAWKLWSEGDPM-EIIDEQTKMKGPFSA  331 (392)
Q Consensus       260 NIll~~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~-------~~~diws~G~v~-~~ld~~~~~~~~~~~  331 (392)
                      ||+++.++.+||+|||+++....... ......||+.|+| ||+.       .+.|+|+.|+++ +++.+...+.+....
T Consensus       138 NIl~~~~~~~kl~Dfg~~~~~~~~~~-~~~~~~~t~~y~a-PE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~  215 (317)
T 2pmi_A          138 NLLINKRGQLKLGDFGLARAFGIPVN-TFSSEVVTLWYRA-PDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDE  215 (317)
T ss_dssp             GEEECTTCCEEECCCSSCEETTSCCC-CCCCCCSCCTTCC-HHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH
T ss_pred             HeEEcCCCCEEECcCccceecCCCcc-cCCCCcccccccC-chHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChH
Confidence            99999999999999999988652221 2223578999999 7754       368999999876 555554444332211


Q ss_pred             HH-------------------------------------------------HHHHHHHHHhhcccCcCCCCCHHHHHHH
Q 045577          332 DE-------------------------------------------------LVKCIEVGLLCVQQRIEDWPTMSSVLTM  361 (392)
Q Consensus       332 ~~-------------------------------------------------~~~~~~i~~~Cl~~dp~~RPsm~eVv~~  361 (392)
                      +.                                                 ...+.+++..|++.||++|||+.++++.
T Consensus       216 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~h  294 (317)
T 2pmi_A          216 EQLKLIFDIMGTPNESLWPSVTKLPKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALHH  294 (317)
T ss_dssp             HHHHHHHHHHCSCCTTTCGGGGGCTTCCTTCCCCCCCCSHHHHGGGCSSCCCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred             HHHHHHHHHhCCCChhHhhhhhhhhhcccccccccchhHHHhhcccccccCCHHHHHHHHHHCCCCcccCCCHHHHhCC
Confidence            11                                                 1245678889999999999999998763

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A

Probab=99.85  E-value=3.4e-22  Score=192.98  Aligned_cols=171  Identities=19%  Similarity=0.245  Sum_probs=126.8

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhc---cccchhhhhHHHHHHHhhhhcCcCCCCceeeccccccee
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFEC---SKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNV  261 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~---~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NI  261 (392)
                      |++.++.......++..|+||||++++++.....+...   ...+..+..++.||+.||.|||++   +|+||||||+||
T Consensus        85 hpnIv~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivHrDlkp~NI  161 (351)
T 3c0i_A           85 HPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDN---NIIHRDVKPHCV  161 (351)
T ss_dssp             CTTBCCEEEEEEETTEEEEEEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGE
T ss_pred             CCCCCcEEEEEEeCCEEEEEEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCChHHe
Confidence            66666666555446778999999999998764433221   234555788999999999999998   899999999999


Q ss_pred             EEcCCCC---CeEeeeeceEEeCCCCcceeceeeecccccCchhHH------HHHHHhcCCCcc-eeecccccCCCC---
Q 045577          262 LLDAEIN---PNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIIDEQTKMKGP---  328 (392)
Q Consensus       262 ll~~~~~---~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld~~~~~~~~---  328 (392)
                      +++.++.   +||+|||+++...... .......||+.|+| ||+.      .+.|+|+.|+++ +++.+..++.+.   
T Consensus       162 l~~~~~~~~~vkl~Dfg~a~~~~~~~-~~~~~~~gt~~y~a-PE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~  239 (351)
T 3c0i_A          162 LLASKENSAPVKLGGFGVAIQLGESG-LVAGGRVGTPHFMA-PEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKER  239 (351)
T ss_dssp             EECSSSTTCCEEECCCTTCEECCTTS-CBCCCCCSCGGGCC-HHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCSSHHH
T ss_pred             EEecCCCCCcEEEecCcceeEecCCC-eeecCCcCCcCccC-HHHHcCCCCCchHhhHHHHHHHHHHHHCCCCCCCcHHH
Confidence            9986654   9999999998875322 22334579999999 7765      478999999977 555554443321   


Q ss_pred             -----------CCHH----HHHHHHHHHHhhcccCcCCCCCHHHHHH
Q 045577          329 -----------FSAD----ELVKCIEVGLLCVQQRIEDWPTMSSVLT  360 (392)
Q Consensus       329 -----------~~~~----~~~~~~~i~~~Cl~~dp~~RPsm~eVv~  360 (392)
                                 ....    ....+.+++..|++.||++||++.++++
T Consensus       240 ~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~  286 (351)
T 3c0i_A          240 LFEGIIKGKYKMNPRQWSHISESAKDLVRRMLMLDPAERITVYEALN  286 (351)
T ss_dssp             HHHHHHHTCCCCCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             HHHHHHcCCCCCCccccccCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence                       1111    1235667888999999999999999985

>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A

Probab=99.85  E-value=8.6e-22  Score=184.53  Aligned_cols=163  Identities=18%  Similarity=0.135  Sum_probs=123.9

Q ss_pred             CCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEE---cCCCCCeEeee
Q 045577          198 DGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLL---DAEINPNISDF  274 (392)
Q Consensus       198 ~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll---~~~~~~kl~DF  274 (392)
                      ++..+++|||+ ++++...............+..++.|++.||.|||++   +|+||||||+||++   +.++.+||+||
T Consensus        77 ~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~~~~~kl~Df  152 (296)
T 3uzp_A           77 GDYNVMVMELL-GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSK---NFIHRDVKPDNFLMGLGKKGNLVYIIDF  152 (296)
T ss_dssp             TTEEEEEEECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECCGGGTTCEEECCC
T ss_pred             CCceEEEEEec-CCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHeEEecCCCCCeEEEeeC
Confidence            35679999999 7787765543333345556889999999999999998   89999999999999   58889999999


Q ss_pred             eceEEeCCCCcc------eeceeeecccccCchhHH------HHHHHhcCCCcc-eeecccccCCCCCC-----------
Q 045577          275 GPARIFGDQTEE------VTGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIIDEQTKMKGPFS-----------  330 (392)
Q Consensus       275 Gla~~~~~~~~~------~~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld~~~~~~~~~~-----------  330 (392)
                      |+++........      ......||+.|+| ||..      .+.|+|+.|+++ +++.++.++.....           
T Consensus       153 g~~~~~~~~~~~~~~~~~~~~~~~gt~~y~a-PE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~  231 (296)
T 3uzp_A          153 GLAKKYRDARTHQHIPYRENKNLTGTARYAS-INTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERIS  231 (296)
T ss_dssp             TTCEECBCTTTCCBCCCCCSCCCCSCTTTCC-HHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHH
T ss_pred             CCcccccccccccccccccccccccccccCC-hhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCcCchhhhhhhhhhc
Confidence            999987632221      1234679999999 7765      478999999877 55665444432111           


Q ss_pred             ------------HHHHHHHHHHHHhhcccCcCCCCCHHHHHHHHccC
Q 045577          331 ------------ADELVKCIEVGLLCVQQRIEDWPTMSSVLTMLSNE  365 (392)
Q Consensus       331 ------------~~~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~L~~~  365 (392)
                                  ......+.+++..|++.||++||++.+|++.|+..
T Consensus       232 ~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~  278 (296)
T 3uzp_A          232 EKKMSTPIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNL  278 (296)
T ss_dssp             HHHHHSCHHHHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHH
T ss_pred             ccccCCchHHHHhhCCHHHHHHHHHHHhcCcCcCCCHHHHHHHHHHH
Confidence                        00123567788899999999999999999999875

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=99.85  E-value=7.5e-22  Score=184.62  Aligned_cols=176  Identities=21%  Similarity=0.181  Sum_probs=131.1

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEc
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLD  264 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~  264 (392)
                      |++.++..... ..+..+++|||++++++...............+..++.|++.||.|||+.   +++||||||+||+++
T Consensus        69 h~~i~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nili~  144 (287)
T 1u59_A           69 NPYIVRLIGVC-QAEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEK---NFVHRDLAARNVLLV  144 (287)
T ss_dssp             CTTBCCEEEEE-ESSSEEEEEECCTTEEHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEE
T ss_pred             CCCEeEEEEEe-cCCCcEEEEEeCCCCCHHHHHHhCCccCCHHHHHHHHHHHHHHHHHHHHC---CEeeCCCchheEEEc
Confidence            45555444433 34678999999999888775544333345556889999999999999998   899999999999999


Q ss_pred             CCCCCeEeeeeceEEeCCCCcce--eceeeecccccCchhHHH------HHHHhcCCCcc-eeec-ccccCCCCCCH---
Q 045577          265 AEINPNISDFGPARIFGDQTEEV--TGRVIGTQTLKTVPELLQ------AWKLWSEGDPM-EIID-EQTKMKGPFSA---  331 (392)
Q Consensus       265 ~~~~~kl~DFGla~~~~~~~~~~--~~~~~gt~~y~a~~~~~~------~~diws~G~v~-~~ld-~~~~~~~~~~~---  331 (392)
                      .++.+||+|||+++.........  .....+|+.|+| ||...      +.|+|+.|+++ +++. +..++......   
T Consensus       145 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~a-PE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~  223 (287)
T 1u59_A          145 NRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYA-PECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVM  223 (287)
T ss_dssp             ETTEEEECCCTTCEECTTCSCEECCCCSSCCCGGGCC-HHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTHHHH
T ss_pred             CCCCEEECcccceeeeccCcceeeccccccccccccC-HHHhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHHHHH
Confidence            99999999999999875322211  222456788999 77653      78999999877 5665 54443322221   


Q ss_pred             -------------HHHHHHHHHHHhhcccCcCCCCCHHHHHHHHccC
Q 045577          332 -------------DELVKCIEVGLLCVQQRIEDWPTMSSVLTMLSNE  365 (392)
Q Consensus       332 -------------~~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~L~~~  365 (392)
                                   .....+.+++..|++.+|++||++.++++.|+..
T Consensus       224 ~~i~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~  270 (287)
T 1u59_A          224 AFIEQGKRMECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRAC  270 (287)
T ss_dssp             HHHHTTCCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHH
T ss_pred             HHHhcCCcCCCCCCcCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence                         2223566788899999999999999999999875

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*

Probab=99.85  E-value=5.4e-22  Score=191.83  Aligned_cols=170  Identities=17%  Similarity=0.135  Sum_probs=126.0

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEc
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLD  264 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~  264 (392)
                      |++.++........+..|+||||++++++.....+... ..+..+..++.||+.||.|||+.   +|+||||||+||+++
T Consensus        80 hp~iv~l~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~-~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~  155 (353)
T 2i0e_A           80 PPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGR-FKEPHAVFYAAEIAIGLFFLQSK---GIIYRDLKLDNVMLD  155 (353)
T ss_dssp             CTTBCCEEEEEECSSEEEEEEECCCSCBHHHHHHHHSS-CCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEEC
T ss_pred             CCEEeeEEEEEEcCCEEEEEEeCCCCCcHHHHHHhcCC-CCHHHHHHHHHHHHHHHHHHHHC---CEEeccCCHHHEEEc
Confidence            44455444433345678999999999999876654433 34445788999999999999998   899999999999999


Q ss_pred             CCCCCeEeeeeceEEeCCCCcceeceeeecccccCchhHH------HHHHHhcCCCcc-eeecccccCCCCCCHHH----
Q 045577          265 AEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIIDEQTKMKGPFSADE----  333 (392)
Q Consensus       265 ~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld~~~~~~~~~~~~~----  333 (392)
                      .++.+||+|||+++..... ........||+.|+| ||+.      .+.|+|++|+++ +++.+.+++.+....+.    
T Consensus       156 ~~g~vkL~DFG~a~~~~~~-~~~~~~~~gt~~y~a-PE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~i  233 (353)
T 2i0e_A          156 SEGHIKIADFGMCKENIWD-GVTTKTFCGTPDYIA-PEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSI  233 (353)
T ss_dssp             TTSCEEECCCTTCBCCCCT-TCCBCCCCSCGGGCC-HHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHH
T ss_pred             CCCcEEEEeCCcccccccC-CcccccccCCccccC-hhhhcCCCcCCcccccchHHHHHHHHcCCCCCCCCCHHHHHHHH
Confidence            9999999999999854321 223344689999999 7765      378999999977 56666555544322221    


Q ss_pred             -----------HHHHHHHHHhhcccCcCCCCC-----HHHHHH
Q 045577          334 -----------LVKCIEVGLLCVQQRIEDWPT-----MSSVLT  360 (392)
Q Consensus       334 -----------~~~~~~i~~~Cl~~dp~~RPs-----m~eVv~  360 (392)
                                 ...+.+++..|++.||++||+     +.++.+
T Consensus       234 ~~~~~~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~i~~  276 (353)
T 2i0e_A          234 MEHNVAYPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKE  276 (353)
T ss_dssp             HHCCCCCCTTSCHHHHHHHHHHTCSCTTSCTTCSTTHHHHHHT
T ss_pred             HhCCCCCCCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhc
Confidence                       124567888999999999995     466654

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...

Probab=99.85  E-value=9.3e-22  Score=189.95  Aligned_cols=167  Identities=15%  Similarity=0.098  Sum_probs=127.1

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEc
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLD  264 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~  264 (392)
                      |++.++.......++..|+||||++++++.....+... .....+..++.|++.||.|||+.   +|+||||||+||+++
T Consensus       100 hp~iv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~-~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~  175 (350)
T 1rdq_E          100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR-FSEPHARFYAAQIVLTFEYLHSL---DLIYRDLKPENLLID  175 (350)
T ss_dssp             CTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHHHCC-CCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEC
T ss_pred             CCCCCeEEEEEEcCCEEEEEEcCCCCCcHHHHHHHcCC-CCHHHHHHHHHHHHHHHHHHHHC---CcccccCccceEEEC
Confidence            55555554444445678999999999999776554333 34455788999999999999998   899999999999999


Q ss_pred             CCCCCeEeeeeceEEeCCCCcceeceeeecccccCchhHH------HHHHHhcCCCcc-eeecccccCCCCCCHHH----
Q 045577          265 AEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIIDEQTKMKGPFSADE----  333 (392)
Q Consensus       265 ~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld~~~~~~~~~~~~~----  333 (392)
                      .++.+||+|||+++.....    .....||+.|+| ||+.      .+.|+|+.|+++ +++.+.+++.+....+.    
T Consensus       176 ~~g~~kL~DFg~a~~~~~~----~~~~~gt~~y~a-PE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i  250 (350)
T 1rdq_E          176 QQGYIQVTDFGFAKRVKGR----TWTLCGTPEALA-PEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKI  250 (350)
T ss_dssp             TTSCEEECCCTTCEECSSC----BCCCEECGGGCC-HHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHH
T ss_pred             CCCCEEEcccccceeccCC----cccccCCccccC-HHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCCCCHHHHHHHH
Confidence            9999999999999876432    234679999999 7765      478999999977 56665444433222111    


Q ss_pred             -----------HHHHHHHHHhhcccCcCCCCC-----HHHHHH
Q 045577          334 -----------LVKCIEVGLLCVQQRIEDWPT-----MSSVLT  360 (392)
Q Consensus       334 -----------~~~~~~i~~~Cl~~dp~~RPs-----m~eVv~  360 (392)
                                 ...+.+++..|++.||.+||+     +.+|++
T Consensus       251 ~~~~~~~p~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~ei~~  293 (350)
T 1rdq_E          251 VSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKN  293 (350)
T ss_dssp             HHCCCCCCTTCCHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHT
T ss_pred             HcCCCCCCCCCCHHHHHHHHHHhhcCHHhccCCccCCHHHHHh
Confidence                       234567888999999999998     888875

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*

Probab=99.85  E-value=4.4e-22  Score=198.26  Aligned_cols=170  Identities=14%  Similarity=0.058  Sum_probs=127.2

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCc-CCCCceeecccccceeEE
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPE-DSRLEIIHRDHKTSNVLL  263 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~-~~~~~iiHrDlKp~NIll  263 (392)
                      |++.++.......++..|+||||++++++.....+.. ......+..++.|++.||.|||+ .   +|+||||||+|||+
T Consensus       207 h~~iv~l~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH~~~---giiHrDlkp~NIll  282 (446)
T 4ejn_A          207 HPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRER-VFSEDRARFYGAEIVSALDYLHSEK---NVVYRDLKLENLML  282 (446)
T ss_dssp             CTTSCCEEEEEEETTEEEEEECCCSSCBHHHHHHHHS-CCCHHHHHHHHHHHHHHHHHHHHHT---CCCCCCCCGGGEEE
T ss_pred             CCeEeeEEEEEeeCCEEEEEEeeCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHhhcC---CEEECCCCHHHEEE
Confidence            6777766555545677899999999999876554433 23455578899999999999997 6   89999999999999


Q ss_pred             cCCCCCeEeeeeceEEeCCCCcceeceeeecccccCchhHHH------HHHHhcCCCcc-eeecccccCCCCCCHHH---
Q 045577          264 DAEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELLQ------AWKLWSEGDPM-EIIDEQTKMKGPFSADE---  333 (392)
Q Consensus       264 ~~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~~------~~diws~G~v~-~~ld~~~~~~~~~~~~~---  333 (392)
                      +.++.+||+|||+++..... ........||+.|+| ||+..      +.|+|+.|+++ +++.+..++.+....+.   
T Consensus       283 ~~~~~~kl~DFG~a~~~~~~-~~~~~~~~gt~~y~a-PE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~  360 (446)
T 4ejn_A          283 DKDGHIKITDFGLCKEGIKD-GATMKTFCGTPEYLA-PEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFEL  360 (446)
T ss_dssp             CSSSCEEECCCCCCCTTCC------CCSSSCGGGCC-HHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHH
T ss_pred             CCCCCEEEccCCCceeccCC-CcccccccCCccccC-HhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHHHHHHH
Confidence            99999999999998753221 222334679999999 77663      78999999977 56666444433222111   


Q ss_pred             ------------HHHHHHHHHhhcccCcCCCC-----CHHHHHH
Q 045577          334 ------------LVKCIEVGLLCVQQRIEDWP-----TMSSVLT  360 (392)
Q Consensus       334 ------------~~~~~~i~~~Cl~~dp~~RP-----sm~eVv~  360 (392)
                                  ...+.+++..|++.||++||     ++.++++
T Consensus       361 i~~~~~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~t~~ell~  404 (446)
T 4ejn_A          361 ILMEEIRFPRTLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQ  404 (446)
T ss_dssp             HHHCCCCCCTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHT
T ss_pred             HHhCCCCCCccCCHHHHHHHHHHcccCHHHhCCCCCCCHHHHHh
Confidence                        12456788899999999999     9999885

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*

Probab=99.84  E-value=3.1e-22  Score=194.93  Aligned_cols=167  Identities=17%  Similarity=0.130  Sum_probs=125.0

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEc
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLD  264 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~  264 (392)
                      |++.++........+..|+||||++++++.....+..+. .+..+..++.||+.||.|||+.   +|+||||||+||+++
T Consensus        98 hp~Iv~l~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~~-~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~  173 (373)
T 2r5t_A           98 HPFLVGLHFSFQTADKLYFVLDYINGGELFYHLQRERCF-LEPRARFYAAEIASALGYLHSL---NIVYRDLKPENILLD  173 (373)
T ss_dssp             CTTBCCEEEEEECSSEEEEEEECCCSCBHHHHHHHHSSC-CHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEC
T ss_pred             CCCCCCEEEEEEeCCEEEEEEeCCCCCcHHHHHHhcCCC-CHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEEC
Confidence            666666555444457799999999999998766554443 3444778999999999999998   899999999999999


Q ss_pred             CCCCCeEeeeeceEEeCCCCcceeceeeecccccCchhHH------HHHHHhcCCCcc-eeecccccCCCCCCHHH----
Q 045577          265 AEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIIDEQTKMKGPFSADE----  333 (392)
Q Consensus       265 ~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld~~~~~~~~~~~~~----  333 (392)
                      .++.+||+|||+++..... ........||+.|+| ||+.      .+.|+|++|+++ +++.+..++.+....+.    
T Consensus       174 ~~g~ikL~DFG~a~~~~~~-~~~~~~~~gt~~y~a-PE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~i  251 (373)
T 2r5t_A          174 SQGHIVLTDFGLCKENIEH-NSTTSTFCGTPEYLA-PEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNI  251 (373)
T ss_dssp             TTSCEEECCCCBCGGGBCC-CCCCCSBSCCCCCCC-HHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSBHHHHHHHH
T ss_pred             CCCCEEEeeCccccccccC-CCccccccCCccccC-HHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHHHHHHHH
Confidence            9999999999998753211 122344689999999 7765      478999999977 56666444433221111    


Q ss_pred             -----------HHHHHHHHHhhcccCcCCCCCHHH
Q 045577          334 -----------LVKCIEVGLLCVQQRIEDWPTMSS  357 (392)
Q Consensus       334 -----------~~~~~~i~~~Cl~~dp~~RPsm~e  357 (392)
                                 ...+.+++..|++.||.+||++.+
T Consensus       252 ~~~~~~~~~~~~~~~~~li~~lL~~dp~~R~~~~~  286 (373)
T 2r5t_A          252 LNKPLQLKPNITNSARHLLEGLLQKDRTKRLGAKD  286 (373)
T ss_dssp             HHSCCCCCSSSCHHHHHHHHHHTCSSGGGSTTTTT
T ss_pred             HhcccCCCCCCCHHHHHHHHHHcccCHHhCCCCCC
Confidence                       124556788999999999999753

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7

Probab=99.84  E-value=3.2e-22  Score=193.38  Aligned_cols=173  Identities=18%  Similarity=0.138  Sum_probs=128.1

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEc
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLD  264 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~  264 (392)
                      |++.++.......++..|+||||++++++......... .....+..++.|++.||.|||+.   +|+||||||+||+++
T Consensus       118 h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~  193 (355)
T 1vzo_A          118 SPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQRER-FTEHEVQIYVGEIVLALEHLHKL---GIIYRDIKLENILLD  193 (355)
T ss_dssp             CTTBCCEEEEEEETTEEEEEECCCCSCBHHHHHHHHSC-CCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEC
T ss_pred             CCceeEEEEEEeeCceEEEEeecCCCCCHHHHHHHcCC-CCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEC
Confidence            55555544443345678999999999999876654433 34445788999999999999998   899999999999999


Q ss_pred             CCCCCeEeeeeceEEeCCCCcceeceeeecccccCchhHH--------HHHHHhcCCCcc-eeecccccCCCC-------
Q 045577          265 AEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELL--------QAWKLWSEGDPM-EIIDEQTKMKGP-------  328 (392)
Q Consensus       265 ~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~--------~~~diws~G~v~-~~ld~~~~~~~~-------  328 (392)
                      .++.+||+|||+++.+............||+.|+| ||+.        .+.|+|++|+++ +++.+..++...       
T Consensus       194 ~~~~~kl~DfG~a~~~~~~~~~~~~~~~gt~~y~a-PE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~  272 (355)
T 1vzo_A          194 SNGHVVLTDFGLSKEFVADETERAYDFCGTIEYMA-PDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQA  272 (355)
T ss_dssp             TTSCEEESCSSEEEECCGGGGGGGCGGGSCCTTCC-HHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCCHH
T ss_pred             CCCcEEEeeCCCCeecccCCCCcccCcccCcCccC-hhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccCCccchHH
Confidence            99999999999998765333333334579999999 7664        267999999877 555554443221       


Q ss_pred             ------------CCHHHHHHHHHHHHhhcccCcCCCC-----CHHHHHHHH
Q 045577          329 ------------FSADELVKCIEVGLLCVQQRIEDWP-----TMSSVLTML  362 (392)
Q Consensus       329 ------------~~~~~~~~~~~i~~~Cl~~dp~~RP-----sm~eVv~~L  362 (392)
                                  .+.+....+.+++..|++.||++||     ++.++++..
T Consensus       273 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~~~~~~s~~ell~h~  323 (355)
T 1vzo_A          273 EISRRILKSEPPYPQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHL  323 (355)
T ss_dssp             HHHHHHHHCCCCCCTTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTSG
T ss_pred             HHHHHHhccCCCCCcccCHHHHHHHHHHhhhCHHHhcCCCCCCHHHHHcCc
Confidence                        1111123456788899999999999     899988653

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*

Probab=99.84  E-value=4.3e-22  Score=188.66  Aligned_cols=160  Identities=19%  Similarity=0.232  Sum_probs=112.2

Q ss_pred             eeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEcCCCCCeEeeeeceEEe
Q 045577          201 VFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEINPNISDFGPARIF  280 (392)
Q Consensus       201 ~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~~~~~~kl~DFGla~~~  280 (392)
                      .|+||||++++++......... .....+..++.|++.||.|||+.   +|+||||||+||+++.++.+||+|||+++..
T Consensus        91 ~~lv~e~~~g~~L~~~l~~~~~-~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~a~~~  166 (311)
T 3ork_A           91 PYIVMEYVDGVTLRDIVHTEGP-MTPKRAIEVIADACQALNFSHQN---GIIHRDVKPANIMISATNAVKVMDFGIARAI  166 (311)
T ss_dssp             EEEEEECCCEEEHHHHHHHHCS-CCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEETTSCEEECCCSCC---
T ss_pred             cEEEEecCCCCCHHHHHHhcCC-CCHHHHHHHHHHHHHHHHHHHHC---CCCcCCCCHHHEEEcCCCCEEEeeccCcccc
Confidence            4999999999998876554332 34455789999999999999998   8999999999999999999999999999876


Q ss_pred             CCCC--cceeceeeecccccCchhHH------HHHHHhcCCCcc-eeecccccCCCCCCHHH------------------
Q 045577          281 GDQT--EEVTGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIIDEQTKMKGPFSADE------------------  333 (392)
Q Consensus       281 ~~~~--~~~~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld~~~~~~~~~~~~~------------------  333 (392)
                      ....  ........||+.|+| ||..      .+.|+|+.|+++ +++.+..++.+....+.                  
T Consensus       167 ~~~~~~~~~~~~~~gt~~y~a-PE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~  245 (311)
T 3ork_A          167 ADSGNSVTQTAAVIGTAQYLS-PEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSARHEG  245 (311)
T ss_dssp             ---------------CCTTCC-HHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHCCCCCHHHHSTT
T ss_pred             cccccccccccccCcCcccCC-HHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCcccccCC
Confidence            5221  122334678999999 7765      378999999877 56666444433322111                  


Q ss_pred             -HHHHHHHHHhhcccCcCCCCCHHH-HHHHHccC
Q 045577          334 -LVKCIEVGLLCVQQRIEDWPTMSS-VLTMLSNE  365 (392)
Q Consensus       334 -~~~~~~i~~~Cl~~dp~~RPsm~e-Vv~~L~~~  365 (392)
                       ...+.+++..|++.||++||+..+ +.+.|...
T Consensus       246 ~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~  279 (311)
T 3ork_A          246 LSADLDAVVLKALAKNPENRYQTAAEMRADLVRV  279 (311)
T ss_dssp             CCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHhcCHhhChhhHHHHHHHHHHH
Confidence             124667888999999999997555 44555543

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*

Probab=99.84  E-value=1.1e-21  Score=183.39  Aligned_cols=176  Identities=20%  Similarity=0.194  Sum_probs=129.0

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEc
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLD  264 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~  264 (392)
                      |++.++...... .++.+++|||++++++...............+..++.|++.||.|||++   +++||||||+||+++
T Consensus        80 h~~i~~~~~~~~-~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nili~  155 (291)
T 1u46_A           80 HRNLIRLYGVVL-TPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESK---RFIHRDLAARNLLLA  155 (291)
T ss_dssp             CTTBCCEEEEEC-SSSCEEEEECCTTCBHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEEE
T ss_pred             CCCcccEEEEEc-cCCceeeEecccCCCHHHHHHhccCCcCHHHHHHHHHHHHHHHHHHHhC---CcccCCCchheEEEc
Confidence            555555544433 3458999999999998775554433345556889999999999999998   899999999999999


Q ss_pred             CCCCCeEeeeeceEEeCCCCcc--eeceeeecccccCchhHH------HHHHHhcCCCcc-eeec-ccccCCCCCC----
Q 045577          265 AEINPNISDFGPARIFGDQTEE--VTGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIID-EQTKMKGPFS----  330 (392)
Q Consensus       265 ~~~~~kl~DFGla~~~~~~~~~--~~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld-~~~~~~~~~~----  330 (392)
                      .++.+||+|||+++........  ......++..|+| ||..      .+.|+|+.|+++ +++. +..++.+...    
T Consensus       156 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~a-PE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~  234 (291)
T 1u46_A          156 TRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCA-PESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQIL  234 (291)
T ss_dssp             ETTEEEECCCTTCEECCC-CCEEEC-----CCGGGCC-HHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHH
T ss_pred             CCCCEEEccccccccccccccchhhhccCCCCceeeC-chhhcCCCCCchhhHHHHHHHHHHHHhCCCCCcccCCHHHHH
Confidence            9999999999999887532221  2223567788999 7765      378999999876 5555 4333322111    


Q ss_pred             -------------HHHHHHHHHHHHhhcccCcCCCCCHHHHHHHHccC
Q 045577          331 -------------ADELVKCIEVGLLCVQQRIEDWPTMSSVLTMLSNE  365 (392)
Q Consensus       331 -------------~~~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~L~~~  365 (392)
                                   ......+.+++..|++.+|++||++.++++.|+..
T Consensus       235 ~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~  282 (291)
T 1u46_A          235 HKIDKEGERLPRPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEA  282 (291)
T ss_dssp             HHHHTSCCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             HHHHccCCCCCCCcCcCHHHHHHHHHHccCCcccCcCHHHHHHHHHHh
Confidence                         11223567788899999999999999999999876

>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*

Probab=99.84  E-value=3.2e-22  Score=207.75  Aligned_cols=175  Identities=21%  Similarity=0.256  Sum_probs=129.2

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEc
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLD  264 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~  264 (392)
                      |++.++.... |.++..++||||++++++.....+... .....+..|+.||+.||.|||++   +|+||||||+|||++
T Consensus       429 hpnIv~l~~~-~~~~~~~lv~E~~~~g~L~~~l~~~~~-l~~~~~~~i~~qi~~~L~yLH~~---~iiHrDLkp~NILl~  503 (635)
T 4fl3_A          429 NPYIVRMIGI-CEAESWMLVMEMAELGPLNKYLQQNRH-VKDKNIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLV  503 (635)
T ss_dssp             CTTBCCEEEE-EESSSEEEEEECCTTEEHHHHHHHCTT-CCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEE
T ss_pred             CCCEeeEEEE-EecCCEEEEEEccCCCCHHHHHhhCCC-CCHHHHHHHHHHHHHHHHHHHHC---CEeCCCCChHhEEEe
Confidence            7888877664 446678999999999999876644332 34455789999999999999998   899999999999999


Q ss_pred             CCCCCeEeeeeceEEeCCCCc--ceeceeeecccccCchhHHH------HHHHhcCCCcc-eeec-ccccCCCCCC----
Q 045577          265 AEINPNISDFGPARIFGDQTE--EVTGRVIGTQTLKTVPELLQ------AWKLWSEGDPM-EIID-EQTKMKGPFS----  330 (392)
Q Consensus       265 ~~~~~kl~DFGla~~~~~~~~--~~~~~~~gt~~y~a~~~~~~------~~diws~G~v~-~~ld-~~~~~~~~~~----  330 (392)
                      .++.+||+|||+++.+.....  .......+|..|+| ||+..      +.|+|++|+++ +++. +..++.+...    
T Consensus       504 ~~~~~kL~DFGla~~~~~~~~~~~~~~~~~~t~~y~A-PE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~~~  582 (635)
T 4fl3_A          504 TQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYA-PECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVT  582 (635)
T ss_dssp             ETTEEEECCTTHHHHTTC-------------CGGGSC-HHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHH
T ss_pred             CCCCEEEEEcCCccccccCccccccccCCCCceeeeC-hhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHH
Confidence            999999999999986542221  12223456788999 77653      78999999977 5555 4444333221    


Q ss_pred             ------------HHHHHHHHHHHHhhcccCcCCCCCHHHHHHHHccC
Q 045577          331 ------------ADELVKCIEVGLLCVQQRIEDWPTMSSVLTMLSNE  365 (392)
Q Consensus       331 ------------~~~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~L~~~  365 (392)
                                  ......+.+++..||+.||++||++.+|++.|+..
T Consensus       583 ~~i~~~~~~~~p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~  629 (635)
T 4fl3_A          583 AMLEKGERMGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNY  629 (635)
T ss_dssp             HHHHTTCCCCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHH
T ss_pred             HHHHcCCCCCCCCCCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHH
Confidence                        11223566788899999999999999999999764

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*

Probab=99.84  E-value=1e-21  Score=184.08  Aligned_cols=175  Identities=21%  Similarity=0.217  Sum_probs=128.7

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEc
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLD  264 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~  264 (392)
                      |++.++..... ..+..|++|||++++++.....+... .....+..++.|++.||.|||+.   +++||||||+||+++
T Consensus        77 h~~i~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~-~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dikp~Nil~~  151 (291)
T 1xbb_A           77 NPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRH-VKDKNIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLV  151 (291)
T ss_dssp             CTTBCCEEEEE-ESSSEEEEEECCTTEEHHHHHHHCTT-CCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEE
T ss_pred             CCCEEEEEEEE-CCCCcEEEEEeCCCCCHHHHHHhCcC-CCHHHHHHHHHHHHHHHHHHHhC---CeEcCCCCcceEEEe
Confidence            55555554433 45678999999999988776544322 34455789999999999999998   899999999999999


Q ss_pred             CCCCCeEeeeeceEEeCCCCcce--eceeeecccccCchhHH------HHHHHhcCCCcc-eeec-ccccCCCCCC----
Q 045577          265 AEINPNISDFGPARIFGDQTEEV--TGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIID-EQTKMKGPFS----  330 (392)
Q Consensus       265 ~~~~~kl~DFGla~~~~~~~~~~--~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld-~~~~~~~~~~----  330 (392)
                      .++.+||+|||+++.........  .....+++.|+| ||..      .+.|+|+.|+++ +++. +..++.+...    
T Consensus       152 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~a-PE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~  230 (291)
T 1xbb_A          152 TQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYA-PECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVT  230 (291)
T ss_dssp             ETTEEEECCCTTCEECCTTCSEEEC----CCCGGGCC-HHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHH
T ss_pred             CCCcEEEccCCcceeeccCCCcccccccCCCCceeeC-hHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCCCCHHHHH
Confidence            99999999999998875332221  122346688999 7765      368999999876 5555 4433332211    


Q ss_pred             ------------HHHHHHHHHHHHhhcccCcCCCCCHHHHHHHHccC
Q 045577          331 ------------ADELVKCIEVGLLCVQQRIEDWPTMSSVLTMLSNE  365 (392)
Q Consensus       331 ------------~~~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~L~~~  365 (392)
                                  ......+.+++..|++.||++||++.+|++.|+..
T Consensus       231 ~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~  277 (291)
T 1xbb_A          231 AMLEKGERMGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNY  277 (291)
T ss_dssp             HHHHTTCCCCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHH
T ss_pred             HHHHcCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence                        11223566788899999999999999999999864

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7

Probab=99.84  E-value=1.1e-21  Score=187.05  Aligned_cols=167  Identities=19%  Similarity=0.217  Sum_probs=126.3

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEc
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLD  264 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~  264 (392)
                      |++.++........+..|++|||++++++.....+... .....+..++.|++.||.|||+.   +|+||||||+||+++
T Consensus        65 hp~Iv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~-~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~  140 (318)
T 1fot_A           65 HPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQR-FPNPVAKFYAAEVCLALEYLHSK---DIIYRDLKPENILLD  140 (318)
T ss_dssp             BTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHHTSS-CCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEEC
T ss_pred             CCCCceEeEEEEeCCEEEEEEeCCCCCCHHHHHHHcCC-CCHHHHHHHHHHHHHHHHHHHHC---CccccCCChheEEEc
Confidence            55555554444445678999999999999876544332 34445788999999999999998   899999999999999


Q ss_pred             CCCCCeEeeeeceEEeCCCCcceeceeeecccccCchhHH------HHHHHhcCCCcc-eeecccccCCCCCCHHHH---
Q 045577          265 AEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIIDEQTKMKGPFSADEL---  334 (392)
Q Consensus       265 ~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld~~~~~~~~~~~~~~---  334 (392)
                      .++.+||+|||+++.....    .....||+.|+| ||+.      .+.|+|+.|+++ +++.+..++.+....+..   
T Consensus       141 ~~g~~kL~Dfg~a~~~~~~----~~~~~gt~~y~a-PE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i  215 (318)
T 1fot_A          141 KNGHIKITDFGFAKYVPDV----TYTLCGTPDYIA-PEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKI  215 (318)
T ss_dssp             TTSCEEECCCSSCEECSSC----BCCCCSCTTTCC-HHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHH
T ss_pred             CCCCEEEeecCcceecCCc----cccccCCccccC-HhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHH
Confidence            9999999999999876422    234679999999 7765      368999999977 566664444333222211   


Q ss_pred             ------------HHHHHHHHhhcccCcCCCC-----CHHHHHH
Q 045577          335 ------------VKCIEVGLLCVQQRIEDWP-----TMSSVLT  360 (392)
Q Consensus       335 ------------~~~~~i~~~Cl~~dp~~RP-----sm~eVv~  360 (392)
                                  ..+.+++..|++.||++||     +++++++
T Consensus       216 ~~~~~~~p~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~~i~~  258 (318)
T 1fot_A          216 LNAELRFPPFFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKN  258 (318)
T ss_dssp             HHCCCCCCTTSCHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHT
T ss_pred             HhCCCCCCCCCCHHHHHHHHHHhccCHHHcCCCcCCCHHHHhc
Confidence                        2456678899999999999     8888874

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*

Probab=99.84  E-value=1e-21  Score=185.86  Aligned_cols=178  Identities=19%  Similarity=0.153  Sum_probs=122.6

Q ss_pred             CCCccccccCcCCC-----CCeeEEecCccCCCcChhhhhhh-----ccccchhhhhHHHHHHHhhhhcCcCCCCceeec
Q 045577          185 SGGCKRNWEADCGD-----GEVFLMFEGIKLPDKSEFTCEFE-----CSKYSSYVTNILYGIARVILYLPEDSRLEIIHR  254 (392)
Q Consensus       185 s~GCvR~~~l~C~~-----~~~~lv~e~~~~~~l~~~~~~~~-----~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHr  254 (392)
                      |++.++........     ...+++|||++++++........     .......++.++.|++.||.|||+.   +|+||
T Consensus        95 h~~iv~~~~~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~  171 (313)
T 3brb_A           95 HPNVIRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNR---NFLHR  171 (313)
T ss_dssp             CTTBCCCCEEEEC-------CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHTT---TCCCC
T ss_pred             CCCeeeeeEEEeeccccCCcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHhC---CcccC
Confidence            56666555443222     24599999999999877543211     1224455889999999999999998   89999


Q ss_pred             ccccceeEEcCCCCCeEeeeeceEEeCCCC-cceeceeeecccccCchhHH------HHHHHhcCCCcc-eeec-ccccC
Q 045577          255 DHKTSNVLLDAEINPNISDFGPARIFGDQT-EEVTGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIID-EQTKM  325 (392)
Q Consensus       255 DlKp~NIll~~~~~~kl~DFGla~~~~~~~-~~~~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld-~~~~~  325 (392)
                      ||||+||+++.++.+||+|||+++...... ........+++.|+| ||..      .+.|+|+.|+++ +++. +...+
T Consensus       172 dikp~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~a-PE~~~~~~~~~~~Di~slG~il~el~~~g~~p~  250 (313)
T 3brb_A          172 DLAARNCMLRDDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIA-IESLADRVYTSKSDVWAFGVTMWEIATRGMTPY  250 (313)
T ss_dssp             CCSGGGEEECTTSCEEECSCSCC----------------CCGGGSC-HHHHHSSCCCHHHHHHHHHHHHHHHHTTSCCSS
T ss_pred             CCCcceEEEcCCCcEEEeecCcceecccccccCcccccCCCccccC-chhhcCCCccchhhhHHHHHHHHHHHhcCCCCC
Confidence            999999999999999999999998764221 112233467888999 7665      478999999876 4555 33333


Q ss_pred             CCCCC----------------HHHHHHHHHHHHhhcccCcCCCCCHHHHHHHHccCC
Q 045577          326 KGPFS----------------ADELVKCIEVGLLCVQQRIEDWPTMSSVLTMLSNES  366 (392)
Q Consensus       326 ~~~~~----------------~~~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~L~~~~  366 (392)
                      .....                ......+.+++..|++.+|++||++.++++.|+...
T Consensus       251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~l~  307 (313)
T 3brb_A          251 PGVQNHEMYDYLLHGHRLKQPEDCLDELYEIMYSCWRTDPLDRPTFSVLRLQLEKLL  307 (313)
T ss_dssp             TTCCGGGHHHHHHTTCCCCCBTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             ccCCHHHHHHHHHcCCCCCCCccccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence            22211                112245677888999999999999999999998753

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*

Probab=99.84  E-value=5.3e-22  Score=191.26  Aligned_cols=165  Identities=21%  Similarity=0.149  Sum_probs=123.1

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEc
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLD  264 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~  264 (392)
                      |++.++........+..|+||||++++++.....+... .....+..++.|++.||.|||+.   +|+||||||+||+++
T Consensus        69 hp~iv~l~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~-l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~  144 (345)
T 3a8x_A           69 HPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRK-LPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLD  144 (345)
T ss_dssp             CTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHHHSS-CCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEEC
T ss_pred             CCccCeEEEEEEeCCEEEEEEeCCCCCcHHHHHHHcCC-CCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEEC
Confidence            55666655544445679999999999999775544332 34555788999999999999998   899999999999999


Q ss_pred             CCCCCeEeeeeceEEeCCCCcceeceeeecccccCchhHH------HHHHHhcCCCcc-eeecccccCCCC--------C
Q 045577          265 AEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIIDEQTKMKGP--------F  329 (392)
Q Consensus       265 ~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld~~~~~~~~--------~  329 (392)
                      .++.+||+|||+++..... ........||+.|+| ||+.      .+.|+|+.|+++ +++.+..++...        .
T Consensus       145 ~~g~~kL~DFG~a~~~~~~-~~~~~~~~gt~~y~a-PE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~  222 (345)
T 3a8x_A          145 SEGHIKLTDYGMCKEGLRP-GDTTSTFCGTPNYIA-PEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQN  222 (345)
T ss_dssp             TTSCEEECCGGGCBCSCCT-TCCBCCCCSCGGGCC-HHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTTTC-------
T ss_pred             CCCCEEEEeccccccccCC-CCcccccCCCccccC-ccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCCcccccccccc
Confidence            9999999999999854321 122344689999999 7765      378999999977 566665444321        0


Q ss_pred             CHHH----------------HHHHHHHHHhhcccCcCCCCCH
Q 045577          330 SADE----------------LVKCIEVGLLCVQQRIEDWPTM  355 (392)
Q Consensus       330 ~~~~----------------~~~~~~i~~~Cl~~dp~~RPsm  355 (392)
                      ....                ...+.+++..|++.||++||+.
T Consensus       223 ~~~~~~~~i~~~~~~~p~~~s~~~~~li~~lL~~dP~~R~~~  264 (345)
T 3a8x_A          223 TEDYLFQVILEKQIRIPRSLSVKAASVLKSFLNKDPKERLGC  264 (345)
T ss_dssp             CHHHHHHHHHHCCCCCCTTSCHHHHHHHHHHTCSSTTTSTTC
T ss_pred             cHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhcCCHhHCCCC
Confidence            1111                1245678889999999999985

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}

Probab=99.84  E-value=1.7e-21  Score=185.00  Aligned_cols=175  Identities=18%  Similarity=0.167  Sum_probs=129.3

Q ss_pred             CCCccccccCcCC--CCCeeEEecCccCCCcChhhhhhhcc--ccchhhhhHHHHHHHhhhhcCcCCCCceeecccccce
Q 045577          185 SGGCKRNWEADCG--DGEVFLMFEGIKLPDKSEFTCEFECS--KYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSN  260 (392)
Q Consensus       185 s~GCvR~~~l~C~--~~~~~lv~e~~~~~~l~~~~~~~~~~--~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~N  260 (392)
                      |++.++.......  ....|+||||++++++.....+....  .....+..++.|++.||.|||+.   +|+||||||+|
T Consensus        66 h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~N  142 (319)
T 4euu_A           66 HKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLREN---GIVHRNIKPGN  142 (319)
T ss_dssp             CTTBCCEEEEEECTTTCCEEEEEECCTTCBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGG
T ss_pred             CCCcceEEEEeecCCCceEEEEEeCCCCCCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHH
Confidence            4455544433221  23679999999999998755443221  35555889999999999999998   89999999999


Q ss_pred             eEE----cCCCCCeEeeeeceEEeCCCCcceeceeeecccccCchhHHH--------------HHHHhcCCCcc-eeecc
Q 045577          261 VLL----DAEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELLQ--------------AWKLWSEGDPM-EIIDE  321 (392)
Q Consensus       261 Ill----~~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~~--------------~~diws~G~v~-~~ld~  321 (392)
                      |++    +.++.+||+|||+++.......  .....||+.|+| ||+..              +.|+|+.|+++ +++.+
T Consensus       143 Ill~~~~~~~~~~kL~Dfg~a~~~~~~~~--~~~~~gt~~y~a-PE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g  219 (319)
T 4euu_A          143 IMRVIGEDGQSVYKLTDFGAARELEDDEQ--FVSLYGTEEYLH-PDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATG  219 (319)
T ss_dssp             EEEEECTTSCEEEEECCCTTCEECCTTCC--BCCCCSCGGGCC-HHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHS
T ss_pred             EEEeccCCCCceEEEccCCCceecCCCCc--eeecccCCCccC-HHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhC
Confidence            999    7778899999999988753322  223579999999 77653              57999999876 44444


Q ss_pred             cccCCC--------------------------------------------CCCHHHHHHHHHHHHhhcccCcCCCCCHHH
Q 045577          322 QTKMKG--------------------------------------------PFSADELVKCIEVGLLCVQQRIEDWPTMSS  357 (392)
Q Consensus       322 ~~~~~~--------------------------------------------~~~~~~~~~~~~i~~~Cl~~dp~~RPsm~e  357 (392)
                      ..++.+                                            .........+.+++..|++.||++||++.|
T Consensus       220 ~~pf~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R~s~~e  299 (319)
T 4euu_A          220 SLPFRPFEGPRRNKEVMYKIITGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQ  299 (319)
T ss_dssp             SCSEECTTCGGGCHHHHHHHHHHCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHH
T ss_pred             CCCCCCCCccchhHHHHHHHhcCCCcccchhhhcccCCccccCccCCcccccchhHHHHhHHHHHHhccCChhhhccHHH
Confidence            333211                                            122344456677888999999999999999


Q ss_pred             HHHHHccC
Q 045577          358 VLTMLSNE  365 (392)
Q Consensus       358 Vv~~L~~~  365 (392)
                      +++..++.
T Consensus       300 ll~h~~d~  307 (319)
T 4euu_A          300 FFAETSDI  307 (319)
T ss_dssp             HHHHHHHH
T ss_pred             hhhccHHH
Confidence            99998765

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}

Probab=99.84  E-value=8e-22  Score=186.34  Aligned_cols=171  Identities=19%  Similarity=0.248  Sum_probs=120.7

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEc
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLD  264 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~  264 (392)
                      |++.++.......++..+++|||++++++........ ......+..++.|++.||.|||+.   +|+||||||+||+++
T Consensus        61 h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~-~~~~~~~~~i~~~l~~~l~~lH~~---~ivH~dlkp~Nil~~  136 (311)
T 4agu_A           61 HPNLVNLLEVFRRKRRLHLVFEYCDHTVLHELDRYQR-GVPEHLVKSITWQTLQAVNFCHKH---NCIHRDVKPENILIT  136 (311)
T ss_dssp             CTTBCCEEEEEEETTEEEEEEECCSEEHHHHHHHTSS-CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEC
T ss_pred             CCCccchhheeecCCeEEEEEEeCCCchHHHHHhhhc-CCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCCChhhEEEc
Confidence            4555554444334567899999999887765443322 234555788999999999999998   899999999999999


Q ss_pred             CCCCCeEeeeeceEEeCCCCcceeceeeecccccCchhHH-------HHHHHhcCCCcc-eeecccccCCCCCCHHHH--
Q 045577          265 AEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELL-------QAWKLWSEGDPM-EIIDEQTKMKGPFSADEL--  334 (392)
Q Consensus       265 ~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~-------~~~diws~G~v~-~~ld~~~~~~~~~~~~~~--  334 (392)
                      .++.+||+|||+++....... ......||+.|+| ||..       .+.|+|+.|+++ +++.+...+.+....+..  
T Consensus       137 ~~~~~kl~Dfg~~~~~~~~~~-~~~~~~~~~~y~a-PE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~  214 (311)
T 4agu_A          137 KHSVIKLCDFGFARLLTGPSD-YYDDEVATRWYRS-PELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYL  214 (311)
T ss_dssp             TTSCEEECCCTTCEECC-------------GGGCC-HHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHH
T ss_pred             CCCCEEEeeCCCchhccCccc-ccCCCcCCccccC-hHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHH
Confidence            999999999999987652222 2233578999999 7755       367999999876 555554444333222211  


Q ss_pred             --------------------------------------------HHHHHHHHhhcccCcCCCCCHHHHHHH
Q 045577          335 --------------------------------------------VKCIEVGLLCVQQRIEDWPTMSSVLTM  361 (392)
Q Consensus       335 --------------------------------------------~~~~~i~~~Cl~~dp~~RPsm~eVv~~  361 (392)
                                                                  ..+.+++..|++.||++|||+.++++.
T Consensus       215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h  285 (311)
T 4agu_A          215 IRKTLGDLIPRHQQVFSTNQYFSGVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLHH  285 (311)
T ss_dssp             HHHHHCSCCHHHHHHHHTCGGGTTCCCCCCSSCCCHHHHCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHTS
T ss_pred             HHHHhcccccccccccccccccccCcCCCccccchhhhhcccccHHHHHHHHHHccCChhhcCCHHHHhcC
Confidence                                                        125568889999999999999999864

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7

Probab=99.84  E-value=8.1e-22  Score=189.71  Aligned_cols=171  Identities=20%  Similarity=0.211  Sum_probs=124.7

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEc
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLD  264 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~  264 (392)
                      |++.++........+..+++|||+++ ++...............+..++.|++.||.|||+.   +|+||||||+||+++
T Consensus        71 h~~iv~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~  146 (346)
T 1ua2_A           71 HPNIIGLLDAFGHKSNISLVFDFMET-DLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQH---WILHRDLKPNNLLLD  146 (346)
T ss_dssp             CTTBCCEEEEECCTTCCEEEEECCSE-EHHHHHTTCCSSCCSSHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEC
T ss_pred             CCCCCeEEEEEeeCCceEEEEEcCCC-CHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHHHC---CEECCCCCHHHEEEc
Confidence            55555555544445779999999996 44443333222334555889999999999999998   899999999999999


Q ss_pred             CCCCCeEeeeeceEEeCCCCcceeceeeecccccCchhHH-------HHHHHhcCCCcc-eeecccccCCCCCCHHH---
Q 045577          265 AEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELL-------QAWKLWSEGDPM-EIIDEQTKMKGPFSADE---  333 (392)
Q Consensus       265 ~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~-------~~~diws~G~v~-~~ld~~~~~~~~~~~~~---  333 (392)
                      .++.+||+|||+++...... .......||+.|+| ||..       .+.|+|+.|+++ +++.+.+.+.+....+.   
T Consensus       147 ~~~~~kl~Dfg~a~~~~~~~-~~~~~~~~t~~y~a-PE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~~~~~~~~~  224 (346)
T 1ua2_A          147 ENGVLKLADFGLAKSFGSPN-RAYTHQVVTRWYRA-PELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTR  224 (346)
T ss_dssp             TTCCEEECCCGGGSTTTSCC-CCCCCSCCCCTTCC-HHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHH
T ss_pred             CCCCEEEEecccceeccCCc-ccCCcccccccccC-chHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHH
Confidence            99999999999997654222 22233578999999 7754       478999999877 45554333332221111   


Q ss_pred             ----------------------------------------HHHHHHHHHhhcccCcCCCCCHHHHHHH
Q 045577          334 ----------------------------------------LVKCIEVGLLCVQQRIEDWPTMSSVLTM  361 (392)
Q Consensus       334 ----------------------------------------~~~~~~i~~~Cl~~dp~~RPsm~eVv~~  361 (392)
                                                              ...+.+++..|++.||++|||+.|+++.
T Consensus       225 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h  292 (346)
T 1ua2_A          225 IFETLGTPTEEQWPDMCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKM  292 (346)
T ss_dssp             HHHHHCCCCTTTSSSTTSSTTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred             HHHHcCCCChhhhhhhccCcccccccccCCCChHHhhccCCHHHHHHHHHHhccChhhCCCHHHHhcC
Confidence                                                    1346678889999999999999999876

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*

Probab=99.84  E-value=8.7e-22  Score=192.43  Aligned_cols=173  Identities=14%  Similarity=0.191  Sum_probs=127.5

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhh-ccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEE
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFE-CSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLL  263 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~-~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll  263 (392)
                      |++.++.......++..|+||||++++++....+... .......+..++.|++.||.|||+.   +|+||||||+|||+
T Consensus        85 h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~NIll  161 (389)
T 3gni_B           85 HPNIVPYRATFIADNELWVVTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIHHM---GYVHRSVKASHILI  161 (389)
T ss_dssp             CTTBCCEEEEEEETTEEEEEEECCTTCBHHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEE
T ss_pred             CCCCCcEeEEEEECCEEEEEEEccCCCCHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEE
Confidence            5666665555444677999999999999987665542 2234555788999999999999998   89999999999999


Q ss_pred             cCCCCCeEeeeeceEEeCCCC------cceeceeeecccccCchhHH--------HHHHHhcCCCcc-eeecccccCCCC
Q 045577          264 DAEINPNISDFGPARIFGDQT------EEVTGRVIGTQTLKTVPELL--------QAWKLWSEGDPM-EIIDEQTKMKGP  328 (392)
Q Consensus       264 ~~~~~~kl~DFGla~~~~~~~------~~~~~~~~gt~~y~a~~~~~--------~~~diws~G~v~-~~ld~~~~~~~~  328 (392)
                      +.++.+||+|||.+.......      ........||+.|+| ||+.        .+.|+|+.|+++ +++.+..++.+.
T Consensus       162 ~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~a-PE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~  240 (389)
T 3gni_B          162 SVDGKVYLSGLRSNLSMISHGQRQRVVHDFPKYSVKVLPWLS-PEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDM  240 (389)
T ss_dssp             CTTCCEEECCGGGCEECEETTEECSCBCCCCTTCTTTGGGSC-HHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTC
T ss_pred             cCCCCEEEcccccceeeccccccccccccccccccccccccC-HHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCC
Confidence            999999999999987643111      111222468899999 7654        367999999876 555554444322


Q ss_pred             CCHHH-------------------------------------------------------------HHHHHHHHHhhccc
Q 045577          329 FSADE-------------------------------------------------------------LVKCIEVGLLCVQQ  347 (392)
Q Consensus       329 ~~~~~-------------------------------------------------------------~~~~~~i~~~Cl~~  347 (392)
                      ...+.                                                             ...+.+++..|++.
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~  320 (389)
T 3gni_B          241 PATQMLLEKLNGTVPCLLDTSTIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQR  320 (389)
T ss_dssp             CSTTHHHHC--------------------------------------------------------CCHHHHHHHHHHTCS
T ss_pred             CHHHHHHHHhcCCCCccccccccccccccccccccccccccccccccCccccccCCCCCCccccccCHHHHHHHHHHhhc
Confidence            11111                                                             12366788899999


Q ss_pred             CcCCCCCHHHHHHH
Q 045577          348 RIEDWPTMSSVLTM  361 (392)
Q Consensus       348 dp~~RPsm~eVv~~  361 (392)
                      ||++|||+.++++.
T Consensus       321 dP~~Rpta~ell~h  334 (389)
T 3gni_B          321 NPDARPSASTLLNH  334 (389)
T ss_dssp             CTTTSCCHHHHTTS
T ss_pred             CcccCCCHHHHhcC
Confidence            99999999999865

>1dlp_A Lectin scafet precursor; two-domain lectin, beta prism II fold, native, sugar binding protein; 3.30A {Hyacinthoides hispanica} SCOP: b.78.1.1 b.78.1.1

Probab=99.84  E-value=1e-20  Score=172.51  Aligned_cols=135  Identities=19%  Similarity=0.280  Sum_probs=93.7

Q ss_pred             CCCcEEecCCCeEEeeecCCCCCCceEEEEEEeCCCCceEEEecCCCCccc--cccCCCCC-------ceEEEecCCCCC
Q 045577           29 EVRDILLAPSTLWGGNSLIPGNSSQSFLVISYKNLPPLVIWVANRNGSINS--NLSQDNDL-------GIIWNVILPRAT   99 (392)
Q Consensus        29 ~~~~~l~s~~~~f~~gf~~~~~~~~~~~~i~~~~~~~~~vW~anr~~p~~~--~~~~~~~~-------~~~w~~~~~~~~   99 (392)
                      ..+++|  ++|.|++||+.+++   .  . +|..  .||||+|||+.|-..  .|..||+|       .+||++++....
T Consensus        18 ~~g~~l--~~g~f~l~f~~~gn---l--~-ly~~--~~~vW~an~~~~~~~~l~l~~dGnLvl~d~~~~~vW~s~~~~~~   87 (236)
T 1dlp_A           18 HAAQSL--ELSSFRFTMQSDCN---L--V-LFDS--DVRVWASNTAGATGCRAVLQSDGLLVILTAQNTIRWSSGTKGSI   87 (236)
T ss_dssp             CTTCEE--CSTTEEEEECTTSC---E--E-EEES--SSEEECCCCCSCSCCBCCBCSSSCBCCBCTTTCCSCCCCCCCCS
T ss_pred             CCCCEE--EcCCEEEEECCCCc---E--E-EEEC--CEEEEECCCCCCCCeEEEEcCCCcEEEEcCCCcEEEeCCccccC
Confidence            456787  49999999986543   1  2 4443  599999999998322  57788888       579999875444


Q ss_pred             CCceEEEecCCCeEEEeccCCCCCceEEeeecCCCCcc-CCCCcccccc-ccCC-------------cccceecccCCCC
Q 045577          100 GSPALQLLVAGNLVLREFSLSHSEGYLWESFDSPSDTI-LPGMKRGMNL-RTGW-------------NQNIKAWNLEKSD  164 (392)
Q Consensus       100 ~~~~~~l~d~Gnlvl~~~~~~~~~~~~Wqsfd~ptdt~-l~~~~~~~~~-~tg~-------------~~~l~s~kld~~g  164 (392)
                      +...|+|+|+|||||++       .++|||||||+||+ ||+|  |.+. .+|+             ......+++..+.
T Consensus        88 ~~~~~~l~d~Gnlvl~~-------~~~W~S~~~p~~t~~lp~~--g~d~L~~gq~~~~~~~~L~s~~d~s~G~~~l~l~~  158 (236)
T 1dlp_A           88 GNYVLVLQPDRTVTIYG-------PGLWDSGTSNKGSVVVANN--GNSILYSTQGNDNHPQTLHATQSLQLSPYRLSMET  158 (236)
T ss_dssp             SCCEEEECSSSCEEEEC-------SEEEECSCCCSSCCCCSSC--CCEECCCC--CCCCCCEECSSCCCBCSSCEEEEET
T ss_pred             CcEEEEEeCCCCEEEec-------CCEEECCCCCCcccccCCc--cceEEecCCcCCCccceEEcCcEeecCcEEEEECC
Confidence            45689999999999973       27999999999877 5554  3332 2332             2222344444444


Q ss_pred             CceEEEEeCCcceEee--ec
Q 045577          165 TPQLVLWRRTEKVFRS--WN  182 (392)
Q Consensus       165 ~~~l~~~~~~~~~w~~--W~  182 (392)
                      ..+++++++...||++  |+
T Consensus       159 dG~LvL~~~~~~~W~s~~~~  178 (236)
T 1dlp_A          159 DCNLVLFDRDDRVWSTNTAG  178 (236)
T ss_dssp             TTEEEEEBTTBCCSCCCCCS
T ss_pred             CCcEEEEcCCEeEEeCCCcC
Confidence            4478888888889987  64

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}

Probab=99.84  E-value=4.6e-22  Score=194.43  Aligned_cols=169  Identities=20%  Similarity=0.226  Sum_probs=127.3

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEc
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLD  264 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~  264 (392)
                      |++.++........+..|+||||+.++++.....+... .....+..++.|++.||.|||+.   +|+||||||+||+++
T Consensus        74 hp~Iv~l~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~-l~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~  149 (384)
T 4fr4_A           74 HPFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQQNVH-FKEETVKLFICELVMALDYLQNQ---RIIHRDMKPDNILLD  149 (384)
T ss_dssp             CTTBCCEEEEEECSSEEEEEECCCTTEEHHHHHHTTCC-CCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEC
T ss_pred             CCCCCcEEEEEEeCCEEEEEEecCCCCcHHHHHHhcCC-CCHHHHHHHHHHHHHHHHHHHHC---CceeccCcHHHeEEC
Confidence            55555555444445679999999999999776554332 34455788999999999999998   899999999999999


Q ss_pred             CCCCCeEeeeeceEEeCCCCcceeceeeecccccCchhHH---------HHHHHhcCCCcc-eeecccccCCCCC--CHH
Q 045577          265 AEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELL---------QAWKLWSEGDPM-EIIDEQTKMKGPF--SAD  332 (392)
Q Consensus       265 ~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~---------~~~diws~G~v~-~~ld~~~~~~~~~--~~~  332 (392)
                      .++.+||+|||+++.....  .......||+.|+| ||+.         .+.|+|+.|+++ +++.+..++....  ...
T Consensus       150 ~~g~vkL~DFG~a~~~~~~--~~~~~~~gt~~Y~a-PE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~  226 (384)
T 4fr4_A          150 EHGHVHITDFNIAAMLPRE--TQITTMAGTKPYMA-PEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSK  226 (384)
T ss_dssp             TTSCEEECCCTTCEECCTT--CCBCCCCSCGGGCC-GGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTTSCHH
T ss_pred             CCCCEEEeccceeeeccCC--CceeccCCCccccC-CeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCCCCccHH
Confidence            9999999999999886532  22334679999999 6654         368999999977 5666655543211  111


Q ss_pred             H----------------HHHHHHHHHhhcccCcCCCCC-HHHHHH
Q 045577          333 E----------------LVKCIEVGLLCVQQRIEDWPT-MSSVLT  360 (392)
Q Consensus       333 ~----------------~~~~~~i~~~Cl~~dp~~RPs-m~eVv~  360 (392)
                      +                ...+.+++..|++.||++||+ +.+|.+
T Consensus       227 ~~~~~~~~~~~~~p~~~s~~~~~li~~lL~~dP~~R~s~~~~l~~  271 (384)
T 4fr4_A          227 EIVHTFETTVVTYPSAWSQEMVSLLKKLLEPNPDQRFSQLSDVQN  271 (384)
T ss_dssp             HHHHHHHHCCCCCCTTSCHHHHHHHHHHSCSSGGGSCCSHHHHHT
T ss_pred             HHHHHHhhcccCCCCcCCHHHHHHHHHHhcCCHhHhcccHHHHHc
Confidence            1                235667888999999999998 777664

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*

Probab=99.84  E-value=4e-22  Score=189.56  Aligned_cols=175  Identities=20%  Similarity=0.221  Sum_probs=127.0

Q ss_pred             CCCccccccCcCC--CCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeE
Q 045577          185 SGGCKRNWEADCG--DGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVL  262 (392)
Q Consensus       185 s~GCvR~~~l~C~--~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIl  262 (392)
                      |++.++.......  ....+++|||++++++.....+..  .....+..++.|++.||.|||+.   +|+||||||+||+
T Consensus        92 h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~i~~~l~~~l~~LH~~---~ivH~Dikp~Nil  166 (318)
T 3lxp_A           92 HEHIIKYKGCCEDAGAASLQLVMEYVPLGSLRDYLPRHS--IGLAQLLLFAQQICEGMAYLHAQ---HYIHRDLAARNVL  166 (318)
T ss_dssp             CTTBCCEEEEEEETTTTEEEEEECCCTTCBHHHHGGGSC--CCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEE
T ss_pred             CcchhhEEEEEecCCCceEEEEEecccCCcHHHHHhhCC--CCHHHHHHHHHHHHHHHHHHHhC---CccCCCCchheEE
Confidence            5555554443221  245799999999999877554322  34555789999999999999998   8999999999999


Q ss_pred             EcCCCCCeEeeeeceEEeCCCCc--ceeceeeecccccCchhHHH------HHHHhcCCCcc-eeecccccCCC------
Q 045577          263 LDAEINPNISDFGPARIFGDQTE--EVTGRVIGTQTLKTVPELLQ------AWKLWSEGDPM-EIIDEQTKMKG------  327 (392)
Q Consensus       263 l~~~~~~kl~DFGla~~~~~~~~--~~~~~~~gt~~y~a~~~~~~------~~diws~G~v~-~~ld~~~~~~~------  327 (392)
                      ++.++.+||+|||+++.......  .......++..|+| ||...      +.|+|+.|+++ +++.+...+..      
T Consensus       167 ~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~y~a-PE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~  245 (318)
T 3lxp_A          167 LDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYA-PECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFL  245 (318)
T ss_dssp             ECTTCCEEECCGGGCEECCTTCSEEEC---CCCCGGGCC-HHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHH
T ss_pred             EcCCCCEEECCccccccccccccccccccCCCCCceeeC-hHHhcCCCCCcHHHHHHHHHHHHHHHhCCCcccccchhhh
Confidence            99999999999999998763322  12233567888999 77653      67999999876 44443221111      


Q ss_pred             -------------------------CCCHHHHHHHHHHHHhhcccCcCCCCCHHHHHHHHccC
Q 045577          328 -------------------------PFSADELVKCIEVGLLCVQQRIEDWPTMSSVLTMLSNE  365 (392)
Q Consensus       328 -------------------------~~~~~~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~L~~~  365 (392)
                                               ..+......+.+++..|++.||++||++.++++.|+..
T Consensus       246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l  308 (318)
T 3lxp_A          246 ELIGIAQGQMTVLRLTELLERGERLPRPDKCPAEVYHLMKNCWETEASFRPTFENLIPILKTV  308 (318)
T ss_dssp             HHHCSCCHHHHHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             hhhcccccchhHHHHHHHHhcccCCCCCccccHHHHHHHHHHcCCCcccCcCHHHHHHHHHHH
Confidence                                     11112223567788899999999999999999999875

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*

Probab=99.84  E-value=1.3e-21  Score=186.44  Aligned_cols=175  Identities=19%  Similarity=0.178  Sum_probs=127.9

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhh---------------ccccchhhhhHHHHHHHhhhhcCcCCCC
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFE---------------CSKYSSYVTNILYGIARVILYLPEDSRL  249 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~---------------~~~~~~~~~~i~~~ia~gL~yLH~~~~~  249 (392)
                      |++.++........+..|++|||++++++.....+..               .......+..++.|++.||.|||+.   
T Consensus        85 hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---  161 (327)
T 1fvr_A           85 HPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---  161 (327)
T ss_dssp             CTTBCCEEEEEEETTEEEEEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHT---
T ss_pred             CCchhhhceeeeeCCceEEEEecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---
Confidence            6666666555444567899999999999877544332               1234555789999999999999998   


Q ss_pred             ceeecccccceeEEcCCCCCeEeeeeceEEeCCCCcceeceeeecccccCchhHH------HHHHHhcCCCcc-eeec-c
Q 045577          250 EIIHRDHKTSNVLLDAEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIID-E  321 (392)
Q Consensus       250 ~iiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld-~  321 (392)
                      +|+||||||+||+++.++.+||+|||+++....  ........+++.|+| ||..      .+.|+|+.|+++ +++. +
T Consensus       162 ~ivH~dlkp~NIl~~~~~~~kL~Dfg~~~~~~~--~~~~~~~~~~~~y~a-PE~~~~~~~~~~~Di~slG~il~ellt~g  238 (327)
T 1fvr_A          162 QFIHRDLAARNILVGENYVAKIADFGLSRGQEV--YVKKTMGRLPVRWMA-IESLNYSVYTTNSDVWSYGVLLWEIVSLG  238 (327)
T ss_dssp             TEECSCCSGGGEEECGGGCEEECCTTCEESSCE--ECCC----CCTTTCC-HHHHHHCEECHHHHHHHHHHHHHHHHTTS
T ss_pred             CccCCCCccceEEEcCCCeEEEcccCcCccccc--cccccCCCCCccccC-hhhhccccCCchhcchHHHHHHHHHHcCC
Confidence            899999999999999999999999999874321  111222456788999 7755      478999999977 4554 4


Q ss_pred             cccCCCCC----------------CHHHHHHHHHHHHhhcccCcCCCCCHHHHHHHHccC
Q 045577          322 QTKMKGPF----------------SADELVKCIEVGLLCVQQRIEDWPTMSSVLTMLSNE  365 (392)
Q Consensus       322 ~~~~~~~~----------------~~~~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~L~~~  365 (392)
                      ..++.+..                +......+.+++..|++.+|++||++.++++.|+..
T Consensus       239 ~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~  298 (327)
T 1fvr_A          239 GTPYCGMTCAELYEKLPQGYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRM  298 (327)
T ss_dssp             CCTTTTCCHHHHHHHGGGTCCCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             CCCCCCCcHHHHHHHhhcCCCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence            33332221                111123566788899999999999999999998764

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}

Probab=99.84  E-value=7.1e-22  Score=190.77  Aligned_cols=167  Identities=20%  Similarity=0.233  Sum_probs=122.6

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhc-cccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEE
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFEC-SKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLL  263 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~-~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll  263 (392)
                      |++.++........+..+++|||+ ++++.....+... ......+..++.|++.||.|||+.   +|+||||||+|||+
T Consensus        95 h~~iv~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll  170 (360)
T 3llt_A           95 NNNIVKYHGKFMYYDHMCLIFEPL-GPSLYEIITRNNYNGFHIEDIKLYCIEILKALNYLRKM---SLTHTDLKPENILL  170 (360)
T ss_dssp             GGGBCCEEEEEEETTEEEEEECCC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEE
T ss_pred             CCCeecccceeeECCeeEEEEcCC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCcccEEE
Confidence            444554444333356789999999 7777665544332 234555788999999999999998   89999999999999


Q ss_pred             cC-------------------------CCCCeEeeeeceEEeCCCCcceeceeeecccccCchhHH------HHHHHhcC
Q 045577          264 DA-------------------------EINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELL------QAWKLWSE  312 (392)
Q Consensus       264 ~~-------------------------~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~------~~~diws~  312 (392)
                      +.                         ++.+||+|||+++.....    .....||+.|+| ||+.      .+.|+|+.
T Consensus       171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~----~~~~~gt~~y~a-PE~~~~~~~~~~~Diwsl  245 (360)
T 3llt_A          171 DDPYFEKSLITVRRVTDGKKIQIYRTKSTGIKLIDFGCATFKSDY----HGSIINTRQYRA-PEVILNLGWDVSSDMWSF  245 (360)
T ss_dssp             SCTTCCEEEEEEECTTTCCEEEEEEESCCCEEECCCTTCEETTSC----CCSCCSCGGGCC-HHHHTTCCCCTTHHHHHH
T ss_pred             ccccccccccchhcccccccccccccCCCCEEEEeccCceecCCC----CcCccCcccccC-cHHHcCCCCCCccchHHH
Confidence            75                         788999999999875421    223578999999 7765      37899999


Q ss_pred             CCcc-eeecccccCCCCCCHHHH---------------------------------------------------------
Q 045577          313 GDPM-EIIDEQTKMKGPFSADEL---------------------------------------------------------  334 (392)
Q Consensus       313 G~v~-~~ld~~~~~~~~~~~~~~---------------------------------------------------------  334 (392)
                      |+++ +++.+..++......+..                                                         
T Consensus       246 G~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~  325 (360)
T 3llt_A          246 GCVLAELYTGSLLFRTHEHMEHLAMMESIIQPIPKNMLYEATKTNGSKYVNKDELKLAWPENASSINSIKHVKKCLPLYK  325 (360)
T ss_dssp             HHHHHHHHHSSCSCCCSSHHHHHHHHHHHTCCCCHHHHHHHTTSGGGGGEETTTTEECTTTTCSCHHHHHHHHTCCCHHH
T ss_pred             HHHHHHHHHCCCCCCCCcHHHHHHHHHHhcCCCCHHHHhhhhhccCccccCcccceecCcccccchhhhhhhhhcccccc
Confidence            9877 566665444332211111                                                         


Q ss_pred             ----HHHHHHHHhhcccCcCCCCCHHHHHH
Q 045577          335 ----VKCIEVGLLCVQQRIEDWPTMSSVLT  360 (392)
Q Consensus       335 ----~~~~~i~~~Cl~~dp~~RPsm~eVv~  360 (392)
                          ..+.+++..|++.||++|||+.|+++
T Consensus       326 ~~~~~~l~~li~~~L~~dP~~Rpta~elL~  355 (360)
T 3llt_A          326 IIKHELFCDFLYSILQIDPTLRPSPAELLK  355 (360)
T ss_dssp             HCCCHHHHHHHHHHCCSSGGGSCCHHHHTT
T ss_pred             cchHHHHHHHHHHHhcCChhhCCCHHHHhc
Confidence                33457888999999999999999875

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*

Probab=99.84  E-value=1.1e-21  Score=192.09  Aligned_cols=170  Identities=16%  Similarity=0.194  Sum_probs=119.6

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEc
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLD  264 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~  264 (392)
                      +++.++.......++..|+|||+ .++++.....+.. ......+..++.||+.||.|||+.   +|+||||||+|||++
T Consensus       115 ~~~iv~~~~~~~~~~~~~lv~E~-~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~aL~~lH~~---~ivHrDlkp~NIll~  189 (390)
T 2zmd_A          115 SDKIIRLYDYEITDQYIYMVMEC-GNIDLNSWLKKKK-SIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIV  189 (390)
T ss_dssp             CTTBCCEEEEEECSSEEEEEEEC-CSEEHHHHHHHCS-SCCHHHHHHHHHHHHHHHHHHHTT---TCCCCCCCGGGEEES
T ss_pred             CCeEEEEEEEEecCCEEEEEEec-CCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHEEEE
Confidence            35555555544445678999994 5566665544433 223444788999999999999998   899999999999995


Q ss_pred             CCCCCeEeeeeceEEeCCCC-cceeceeeecccccCchhHHH-----------------HHHHhcCCCcc-eeecccccC
Q 045577          265 AEINPNISDFGPARIFGDQT-EEVTGRVIGTQTLKTVPELLQ-----------------AWKLWSEGDPM-EIIDEQTKM  325 (392)
Q Consensus       265 ~~~~~kl~DFGla~~~~~~~-~~~~~~~~gt~~y~a~~~~~~-----------------~~diws~G~v~-~~ld~~~~~  325 (392)
                       ++.+||+|||+++.+.... ........||+.|+| ||+..                 +.|+|++|+++ +++.+..++
T Consensus       190 -~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~a-PE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf  267 (390)
T 2zmd_A          190 -DGMLKLIDFGIANQMQPDTTSVVKDSQVGAVNYMP-PEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF  267 (390)
T ss_dssp             -SSCEEECCCSSSCCC---------CCSCCCGGGCC-HHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTT
T ss_pred             -CCeEEEEecCccccccCCCccccCCCCCcCCCccC-hHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcc
Confidence             5789999999998764221 222334679999999 77653                 57999999976 555554444


Q ss_pred             CCCCCH------------------HHHHHHHHHHHhhcccCcCCCCCHHHHHHH
Q 045577          326 KGPFSA------------------DELVKCIEVGLLCVQQRIEDWPTMSSVLTM  361 (392)
Q Consensus       326 ~~~~~~------------------~~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~  361 (392)
                      ......                  .....+.+++..|++.||++||++.++++.
T Consensus       268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~h  321 (390)
T 2zmd_A          268 QQIINQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAH  321 (390)
T ss_dssp             TTCCCHHHHHHHHHCTTSCCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred             hhhhHHHHHHHHHhCccccCCCCccchHHHHHHHHHHcccChhhCCCHHHHhhC
Confidence            332211                  111346678889999999999999999864

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*

Probab=99.84  E-value=1.4e-21  Score=203.75  Aligned_cols=176  Identities=19%  Similarity=0.195  Sum_probs=130.9

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEc
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLD  264 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~  264 (392)
                      |++.++..... .++..|+||||++++++...............+..++.|++.||.|||+.   +|+||||||+||+++
T Consensus       450 HpnIv~l~~~~-~~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDikp~NILl~  525 (656)
T 2j0j_A          450 HPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVS  525 (656)
T ss_dssp             CTTBCCEEEEE-CSSSCEEEEECCTTCBHHHHHHHTTTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEE
T ss_pred             CCCCCeEEEEE-ecCceEEEEEcCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhC---CccccccchHhEEEe
Confidence            88888877653 45779999999999999876544433345555788999999999999998   899999999999999


Q ss_pred             CCCCCeEeeeeceEEeCCCCcceeceeeecccccCchhHH------HHHHHhcCCCcc-eeec-ccccCCCCCCH-----
Q 045577          265 AEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIID-EQTKMKGPFSA-----  331 (392)
Q Consensus       265 ~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld-~~~~~~~~~~~-----  331 (392)
                      .++.+||+|||+++..............+++.|+| ||..      .+.|+|+.|+++ +++. +..++.+....     
T Consensus       526 ~~~~vkL~DFG~a~~~~~~~~~~~~~~~~t~~y~a-PE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~~~~~  604 (656)
T 2j0j_A          526 SNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMA-PESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGR  604 (656)
T ss_dssp             ETTEEEECCCCCCCSCCC----------CCGGGCC-HHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHH
T ss_pred             CCCCEEEEecCCCeecCCCcceeccCCCCCcceeC-HHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCCCCHHHHHHH
Confidence            99999999999998664333223334567789999 7765      378999999876 4554 43333322111     


Q ss_pred             -----------HHHHHHHHHHHhhcccCcCCCCCHHHHHHHHccC
Q 045577          332 -----------DELVKCIEVGLLCVQQRIEDWPTMSSVLTMLSNE  365 (392)
Q Consensus       332 -----------~~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~L~~~  365 (392)
                                 .....+.+++..|++.||++||++.++++.|+..
T Consensus       605 i~~~~~~~~~~~~~~~l~~li~~~l~~dP~~RPs~~el~~~L~~i  649 (656)
T 2j0j_A          605 IENGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTI  649 (656)
T ss_dssp             HHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             HHcCCCCCCCccccHHHHHHHHHHcCCChhHCcCHHHHHHHHHHH
Confidence                       1123566788899999999999999999999764

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A

Probab=99.84  E-value=1.4e-21  Score=204.18  Aligned_cols=170  Identities=17%  Similarity=0.137  Sum_probs=128.9

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEc
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLD  264 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~  264 (392)
                      |+..++........+..|+||||++++++.....+... ..+..+..++.||+.||.|||+.   +|+||||||+|||++
T Consensus       401 ~~~i~~l~~~~~~~~~~~lV~E~~~gg~L~~~l~~~~~-~~~~~~~~~~~qi~~aL~~LH~~---gIiHrDLKp~NILl~  476 (674)
T 3pfq_A          401 PPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGR-FKEPHAVFYAAEIAIGLFFLQSK---GIIYRDLKLDNVMLD  476 (674)
T ss_dssp             CTTBCCEEEECBCSSEEEEEEECCCSCBHHHHHHHHSS-CCHHHHHHHHHHHHHHHHHHHHT---SEECCCCCSTTEEEC
T ss_pred             CCeEEEEEEEEEeCCEEEEEEeCcCCCcHHHHHHhcCC-CCHHHHHHHHHHHHHHHHHHHhC---CeEeccCChhhEEEc
Confidence            55555554444445678999999999999876654432 34455788999999999999998   899999999999999


Q ss_pred             CCCCCeEeeeeceEEeCCCCcceeceeeecccccCchhHH------HHHHHhcCCCcc-eeecccccCCCCCCHHH----
Q 045577          265 AEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIIDEQTKMKGPFSADE----  333 (392)
Q Consensus       265 ~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld~~~~~~~~~~~~~----  333 (392)
                      .++.+||+|||+++..... ........||+.|+| ||+.      .+.|+|++|+++ +++.+.+++.+....+.    
T Consensus       477 ~~g~ikL~DFGla~~~~~~-~~~~~~~~GT~~Y~A-PE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~~~~~~~~~~i  554 (674)
T 3pfq_A          477 SEGHIKIADFGMCKENIWD-GVTTKTFCGTPDYIA-PEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSI  554 (674)
T ss_dssp             SSSCEEECCCTTCEECCCT-TCCBCCCCSCSSSCC-HHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHH
T ss_pred             CCCcEEEeecceeeccccC-CcccccccCCCcccC-HhhhcCCCCCccceEechHHHHHHHHcCCCCCCCCCHHHHHHHH
Confidence            9999999999999874322 223345789999999 7766      378999999977 66666555544322222    


Q ss_pred             -----------HHHHHHHHHhhcccCcCCCCCH-----HHHHH
Q 045577          334 -----------LVKCIEVGLLCVQQRIEDWPTM-----SSVLT  360 (392)
Q Consensus       334 -----------~~~~~~i~~~Cl~~dp~~RPsm-----~eVv~  360 (392)
                                 ...+.+++..|++.||++||++     .+|.+
T Consensus       555 ~~~~~~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~ei~~  597 (674)
T 3pfq_A          555 MEHNVAYPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKE  597 (674)
T ss_dssp             HSSCCCCCTTSCHHHHHHHHHHSCSSSTTCTTCSTTHHHHHHS
T ss_pred             HhCCCCCCccCCHHHHHHHHHHccCCHHHCCCCCCCcHHHHhc
Confidence                       2245678889999999999997     66653

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A

Probab=99.84  E-value=8.5e-22  Score=190.94  Aligned_cols=170  Identities=18%  Similarity=0.150  Sum_probs=118.9

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEc
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLD  264 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~  264 (392)
                      |++.++........+..|+||||++++++....+.... .....+..++.|++.||.|||+.   +|+||||||+||+++
T Consensus        75 hpniv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~-~~~~~~~~i~~ql~~~L~~LH~~---~ivH~Dlkp~Nill~  150 (361)
T 3uc3_A           75 HPNIVRFKEVILTPTHLAIIMEYASGGELYERICNAGR-FSEDEARFFFQQLLSGVSYCHSM---QICHRDLKLENTLLD  150 (361)
T ss_dssp             CTTBCCEEEEEECSSEEEEEEECCCSCBHHHHHHHHSS-CCHHHHHHHHHHHHHHHHHHHHT---TCCSCCCCGGGEEEC
T ss_pred             CCCCCcEEEEEeeCCEEEEEEEeCCCCCHHHHHHhcCC-CCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEc
Confidence            66666655554445779999999999999876655443 34455788999999999999998   899999999999998


Q ss_pred             CCCC--CeEeeeeceEEeCCCCcceeceeeecccccCchhHH-------HHHHHhcCCCcc-eeecccccCCCCCCH---
Q 045577          265 AEIN--PNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELL-------QAWKLWSEGDPM-EIIDEQTKMKGPFSA---  331 (392)
Q Consensus       265 ~~~~--~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~-------~~~diws~G~v~-~~ld~~~~~~~~~~~---  331 (392)
                      .++.  +||+|||+++.....  .......||+.|+| ||+.       .+.|+|+.|+++ +++.++.++.+....   
T Consensus       151 ~~~~~~~kl~Dfg~a~~~~~~--~~~~~~~gt~~y~a-PE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~  227 (361)
T 3uc3_A          151 GSPAPRLKICDFGYSKSSVLH--SQPKSTVGTPAYIA-PEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDY  227 (361)
T ss_dssp             SSSSCCEEECCCCCC-----------------CTTSC-HHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC----CCCH
T ss_pred             CCCCceEEEeecCcccccccc--CCCCCCcCCCCcCC-hhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCccHHHH
Confidence            7765  999999999754321  12233579999999 7765       347999999876 555554443321110   


Q ss_pred             ------------------HHHHHHHHHHHhhcccCcCCCCCHHHHHHH
Q 045577          332 ------------------DELVKCIEVGLLCVQQRIEDWPTMSSVLTM  361 (392)
Q Consensus       332 ------------------~~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~  361 (392)
                                        .....+.+++.+|++.||++|||+.++++.
T Consensus       228 ~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rps~~ell~h  275 (361)
T 3uc3_A          228 RKTIQRILSVKYSIPDDIRISPECCHLISRIFVADPATRISIPEIKTH  275 (361)
T ss_dssp             HHHHHHHHTTCCCCCTTSCCCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred             HHHHHHHhcCCCCCCCcCCCCHHHHHHHHHHccCChhHCcCHHHHHhC
Confidence                              112356678889999999999999999864

>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}

Probab=99.84  E-value=1.3e-21  Score=196.66  Aligned_cols=163  Identities=16%  Similarity=0.166  Sum_probs=124.1

Q ss_pred             CCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEE---cCCCCCeEeee
Q 045577          198 DGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLL---DAEINPNISDF  274 (392)
Q Consensus       198 ~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll---~~~~~~kl~DF  274 (392)
                      .+..+++|||+ ++++...............++.|+.||+.||.|||+.   +|+||||||+|||+   +.++.+||+||
T Consensus        75 ~~~~~lvme~~-g~sL~~ll~~~~~~l~~~~~~~i~~qi~~aL~yLH~~---gIvHrDIKP~NILl~~~~~~~~vkL~DF  150 (483)
T 3sv0_A           75 GDYNVLVMDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSK---SFLHRDIKPDNFLMGLGRRANQVYIIDF  150 (483)
T ss_dssp             TTEEEEEEECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECCGGGTTCEEECCC
T ss_pred             CCEEEEEEECC-CCCHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccCcceEEEecCCCCCeEEEEeC
Confidence            35679999999 7777765433222345556899999999999999998   89999999999999   68899999999


Q ss_pred             eceEEeCCCCcc------eeceeeecccccCchhHH------HHHHHhcCCCcc-eeecccccCCCCCCH---HH-----
Q 045577          275 GPARIFGDQTEE------VTGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIIDEQTKMKGPFSA---DE-----  333 (392)
Q Consensus       275 Gla~~~~~~~~~------~~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld~~~~~~~~~~~---~~-----  333 (392)
                      |+++.+......      ......||+.|+| ||..      .+.|+|++|+++ +++.+..++.+....   +.     
T Consensus       151 Gla~~~~~~~~~~~~~~~~~~~~~gt~~Y~a-PE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~  229 (483)
T 3sv0_A          151 GLAKKYRDTSTHQHIPYRENKNLTGTARYAS-VNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKIS  229 (483)
T ss_dssp             TTCEECBCTTTCCBCCCCCCCCCCSCTTTCC-HHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSHHHHHHHHH
T ss_pred             CcceeccCCccccccccccccccCCCccccC-HHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccchhHHHHHHHHh
Confidence            999987632211      1224679999999 7765      478999999877 666665555432210   00     


Q ss_pred             ---------------HHHHHHHHHhhcccCcCCCCCHHHHHHHHccC
Q 045577          334 ---------------LVKCIEVGLLCVQQRIEDWPTMSSVLTMLSNE  365 (392)
Q Consensus       334 ---------------~~~~~~i~~~Cl~~dp~~RPsm~eVv~~L~~~  365 (392)
                                     ...+.+++..|++.+|++||++.+|+++|+..
T Consensus       230 ~~~~~~~~~~l~~~~p~~l~~li~~cl~~dP~~RPs~~el~~~L~~l  276 (483)
T 3sv0_A          230 EKKVATSIEALCRGYPTEFASYFHYCRSLRFDDKPDYSYLKRLFRDL  276 (483)
T ss_dssp             HHHHHSCHHHHHTTSCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHH
T ss_pred             hccccccHHHHhcCCcHHHHHHHHHHhcCChhhCcCHHHHHHHHHHH
Confidence                           12567788899999999999999999998754

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*

Probab=99.84  E-value=1.2e-21  Score=194.24  Aligned_cols=134  Identities=19%  Similarity=0.245  Sum_probs=97.7

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhh-ccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEE
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFE-CSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLL  263 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~-~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll  263 (392)
                      +.+.++........+..+++|||+.+ ++........ .......+..++.||+.||.|||+.   +|+||||||+|||+
T Consensus       158 ~~~iv~~~~~~~~~~~~~lv~e~~~~-~L~~~l~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlKp~NILl  233 (429)
T 3kvw_A          158 TMNVIHMLENFTFRNHICMTFELLSM-NLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKN---RIIHCDLKPENILL  233 (429)
T ss_dssp             CSCBCCEEEEEEETTEEEEEECCCCC-BHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHH---TEECSCCSGGGEEE
T ss_pred             CcCEEEEEeecccCCeEEEEEeccCC-CHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEE
Confidence            33444444433334678999999974 5544333322 2234555789999999999999998   89999999999999


Q ss_pred             cCCCC--CeEeeeeceEEeCCCCcceeceeeecccccCchhHH------HHHHHhcCCCcc-eeecccccCCC
Q 045577          264 DAEIN--PNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIIDEQTKMKG  327 (392)
Q Consensus       264 ~~~~~--~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld~~~~~~~  327 (392)
                      +.++.  +||+|||+++.....    .....||+.|+| ||+.      .+.|+|++|+++ +++.+.+.+.+
T Consensus       234 ~~~~~~~vkL~DFG~a~~~~~~----~~~~~gt~~y~a-PE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~  301 (429)
T 3kvw_A          234 KQQGRSGIKVIDFGSSCYEHQR----VYTYIQSRFYRA-PEVILGARYGMPIDMWSLGCILAELLTGYPLLPG  301 (429)
T ss_dssp             SSTTSCCEEECCCTTCEETTCC----CCSSCSCGGGCC-HHHHHTBCCCTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred             ccCCCcceEEeecccceecCCc----ccccCCCCCccC-hHHHhCCCCCchHHHHhHHHHHHHHHhCCCCCCC
Confidence            99887  899999999875321    223578999999 7765      378999999977 56666544443

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A

Probab=99.84  E-value=1.2e-21  Score=188.55  Aligned_cols=170  Identities=19%  Similarity=0.181  Sum_probs=125.2

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEc
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLD  264 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~  264 (392)
                      |++.++.......++..|+||||++++++.....+... ..+..+..++.||+.||.|||++   +|+||||||+||++.
T Consensus        75 hp~iv~~~~~~~~~~~~~lv~E~~~gg~L~~~i~~~~~-~~~~~~~~~~~qi~~al~~lH~~---givHrDlkp~NIl~~  150 (342)
T 2qr7_A           75 HPNIITLKDVYDDGKYVYVVTELMKGGELLDKILRQKF-FSEREASAVLFTITKTVEYLHAQ---GVVHRDLKPSNILYV  150 (342)
T ss_dssp             STTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHTCTT-CCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEES
T ss_pred             CCCcCeEEEEEEcCCEEEEEEeCCCCCcHHHHHHHcCC-CCHHHHHHHHHHHHHHHHHHHHC---CcEeccCCHHHEEEe
Confidence            56666655554445678999999999998776554432 34455788999999999999998   899999999999985


Q ss_pred             CC-C---CCeEeeeeceEEeCCCCcceeceeeecccccCchhHH------HHHHHhcCCCcc-eeecccccCCCC--CCH
Q 045577          265 AE-I---NPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIIDEQTKMKGP--FSA  331 (392)
Q Consensus       265 ~~-~---~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld~~~~~~~~--~~~  331 (392)
                      .. +   .+||+|||+++....... ......||+.|+| ||+.      .+.|+|+.|+++ +++.+..++.+.  ...
T Consensus       151 ~~~~~~~~~kl~Dfg~a~~~~~~~~-~~~~~~gt~~y~a-PE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~  228 (342)
T 2qr7_A          151 DESGNPESIRICDFGFAKQLRAENG-LLMTPCYTANFVA-PEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDTP  228 (342)
T ss_dssp             SSSCSGGGEEECCCTTCEECBCTTC-CBCCSSCCSSCCC-HHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCSSTTSCH
T ss_pred             cCCCCcCeEEEEECCCcccCcCCCC-ceeccCCCccccC-HHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCCCCcCCH
Confidence            43 2   489999999998653322 2233578999999 7654      467999999877 555554444321  111


Q ss_pred             H--------------------HHHHHHHHHHhhcccCcCCCCCHHHHHH
Q 045577          332 D--------------------ELVKCIEVGLLCVQQRIEDWPTMSSVLT  360 (392)
Q Consensus       332 ~--------------------~~~~~~~i~~~Cl~~dp~~RPsm~eVv~  360 (392)
                      +                    ....+.+++..|++.||++||++.++++
T Consensus       229 ~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~~il~  277 (342)
T 2qr7_A          229 EEILARIGSGKFSLSGGYWNSVSDTAKDLVSKMLHVDPHQRLTAALVLR  277 (342)
T ss_dssp             HHHHHHHHHCCCCCCSTTTTTSCHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred             HHHHHHHccCCcccCccccccCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence            1                    1234567888999999999999999875

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A

Probab=99.84  E-value=2.8e-22  Score=191.45  Aligned_cols=171  Identities=18%  Similarity=0.148  Sum_probs=112.8

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEc
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLD  264 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~  264 (392)
                      |++.++.......++..|+||||++++++.....+... .....+..++.|++.||.|||+.   +|+||||||+||+++
T Consensus        65 h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~-~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIll~  140 (325)
T 3kn6_A           65 HPNIVKLHEVFHDQLHTFLVMELLNGGELFERIKKKKH-FSETEASYIMRKLVSAVSHMHDV---GVVHRDLKPENLLFT  140 (325)
T ss_dssp             CTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHHCSC-CCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEE
T ss_pred             CCCeeEEEEEEEcCCEEEEEEEccCCCcHHHHHHhcCC-CCHHHHHHHHHHHHHHHHHHHHC---CCeecCCCHHHEEEe
Confidence            56666665554445678999999999998776554432 34555788999999999999998   899999999999997


Q ss_pred             CCC---CCeEeeeeceEEeCCCCcceeceeeecccccCchhHH------HHHHHhcCCCcc-eeecccccCCCCC-----
Q 045577          265 AEI---NPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIIDEQTKMKGPF-----  329 (392)
Q Consensus       265 ~~~---~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld~~~~~~~~~-----  329 (392)
                      .++   .+||+|||+++...... .......||+.|+| ||+.      .+.|+|+.|+++ +++.+..++....     
T Consensus       141 ~~~~~~~~kl~Dfg~a~~~~~~~-~~~~~~~~t~~y~a-PE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~  218 (325)
T 3kn6_A          141 DENDNLEIKIIDFGFARLKPPDN-QPLKTPCFTLHYAA-PELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTC  218 (325)
T ss_dssp             C----CEEEECCCTTCEECCC------------------------CCCCHHHHHHHHHHHHHHHHHSSCTTC-------C
T ss_pred             cCCCcccEEEeccccceecCCCC-CcccccCCCcCccC-HHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCcccccc
Confidence            665   79999999998765322 22234578999999 6654      478999999876 5555544433211     


Q ss_pred             -----------------CH----HHHHHHHHHHHhhcccCcCCCCCHHHHHHH
Q 045577          330 -----------------SA----DELVKCIEVGLLCVQQRIEDWPTMSSVLTM  361 (392)
Q Consensus       330 -----------------~~----~~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~  361 (392)
                                       ..    .....+.+++..|++.||++||++.++++.
T Consensus       219 ~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~h  271 (325)
T 3kn6_A          219 TSAVEIMKKIKKGDFSFEGEAWKNVSQEAKDLIQGLLTVDPNKRLKMSGLRYN  271 (325)
T ss_dssp             CCHHHHHHHHTTTCCCCCSHHHHTSCHHHHHHHHHHHCCCTTTCCCTTTSTTC
T ss_pred             ccHHHHHHHHHcCCCCCCcccccCCCHHHHHHHHHHCCCChhHCCCHHHHhcC
Confidence                             00    112356678889999999999999998754

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*

Probab=99.84  E-value=2.6e-21  Score=178.64  Aligned_cols=171  Identities=14%  Similarity=0.126  Sum_probs=127.1

Q ss_pred             CCCccccccCcCCC--CCeeEEecCccCCCcChhhhhhhc-cccchhhhhHHHHHHHhhhhcCcCCCCc--eeecccccc
Q 045577          185 SGGCKRNWEADCGD--GEVFLMFEGIKLPDKSEFTCEFEC-SKYSSYVTNILYGIARVILYLPEDSRLE--IIHRDHKTS  259 (392)
Q Consensus       185 s~GCvR~~~l~C~~--~~~~lv~e~~~~~~l~~~~~~~~~-~~~~~~~~~i~~~ia~gL~yLH~~~~~~--iiHrDlKp~  259 (392)
                      |++.++........  +..+++|||++++++.....+... ......+..++.|++.||.|||+.   +  ++||||||+
T Consensus        66 h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~~~i~H~dikp~  142 (271)
T 3kmu_A           66 HPNVLPVLGACQSPPAPHPTLITHWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLHTL---EPLIPRHALNSR  142 (271)
T ss_dssp             CTTEECEEEEECTTTSSSCEEEEECCTTCBHHHHHHSCSSCCCCHHHHHHHHHHHHHHHHHHTTS---SSCCTTCCCSGG
T ss_pred             CCchhheEEEEccCCCCCeEeeecccCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcC---CCceecCCCccc
Confidence            55555555443222  567999999999999876654332 235556899999999999999997   6  999999999


Q ss_pred             eeEEcCCCCCeEeeeeceEEeCCCCcceeceeeecccccCchhHHH---------HHHHhcCCCcc-eeecccccCCCCC
Q 045577          260 NVLLDAEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELLQ---------AWKLWSEGDPM-EIIDEQTKMKGPF  329 (392)
Q Consensus       260 NIll~~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~~---------~~diws~G~v~-~~ld~~~~~~~~~  329 (392)
                      ||+++.++.+||.|||++....      .....||+.|+| ||...         +.|+|+.|+++ +++.+..++.+..
T Consensus       143 Nil~~~~~~~~l~~~~~~~~~~------~~~~~~t~~y~a-PE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~  215 (271)
T 3kmu_A          143 SVMIDEDMTARISMADVKFSFQ------SPGRMYAPAWVA-PEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLS  215 (271)
T ss_dssp             GEEECTTSCEEEEGGGSCCTTS------CTTCBSCGGGSC-HHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTSC
T ss_pred             eEEEcCCcceeEEeccceeeec------ccCccCCccccC-hhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCccccC
Confidence            9999999999999888764321      123468999999 77653         68999999876 5555533332211


Q ss_pred             -----------------CHHHHHHHHHHHHhhcccCcCCCCCHHHHHHHHccC
Q 045577          330 -----------------SADELVKCIEVGLLCVQQRIEDWPTMSSVLTMLSNE  365 (392)
Q Consensus       330 -----------------~~~~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~L~~~  365 (392)
                                       +......+.+++..|++.||++||++.++++.|+..
T Consensus       216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~L~~l  268 (271)
T 3kmu_A          216 NMEIGMKVALEGLRPTIPPGISPHVSKLMKICMNEDPAKRPKFDMIVPILEKM  268 (271)
T ss_dssp             HHHHHHHHHHSCCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             hHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHh
Confidence                             111223566788899999999999999999999875

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}

Probab=99.84  E-value=1e-21  Score=188.79  Aligned_cols=169  Identities=16%  Similarity=0.190  Sum_probs=117.2

Q ss_pred             CCccccccCcCCCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEcC
Q 045577          186 GGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDA  265 (392)
Q Consensus       186 ~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~~  265 (392)
                      ++.++.......++..|++||+ .++++.....+... .....+..++.|++.||.|||+.   +|+||||||+|||++ 
T Consensus        69 ~~iv~~~~~~~~~~~~~lv~e~-~~~~L~~~l~~~~~-~~~~~~~~i~~qi~~al~~lH~~---~iiHrDikp~NIll~-  142 (343)
T 3dbq_A           69 DKIIRLYDYEITDQYIYMVMEC-GNIDLNSWLKKKKS-IDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIV-  142 (343)
T ss_dssp             TTBCCEEEEEECSSEEEEEECC-CSEEHHHHHHHSCC-CCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEE-
T ss_pred             CceEEEeeeEeeCCEEEEEEeC-CCCCHHHHHHhcCC-CCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCcceEEEE-
Confidence            4444444443345678999995 45666665544332 33445788999999999999998   899999999999997 


Q ss_pred             CCCCeEeeeeceEEeCCCC-cceeceeeecccccCchhHHH-----------------HHHHhcCCCcc-eeecccccCC
Q 045577          266 EINPNISDFGPARIFGDQT-EEVTGRVIGTQTLKTVPELLQ-----------------AWKLWSEGDPM-EIIDEQTKMK  326 (392)
Q Consensus       266 ~~~~kl~DFGla~~~~~~~-~~~~~~~~gt~~y~a~~~~~~-----------------~~diws~G~v~-~~ld~~~~~~  326 (392)
                      ++.+||+|||+++.+.... ........||+.|+| ||+..                 +.|+|+.|+++ +++.+..++.
T Consensus       143 ~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~a-PE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~  221 (343)
T 3dbq_A          143 DGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMP-PEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQ  221 (343)
T ss_dssp             TTEEEECCCSSSCCC------------CCCCSSCC-HHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTT
T ss_pred             CCcEEEeecccccccCcccccccCCCCcCCcCcCC-HHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcch
Confidence            5689999999998764222 222334679999999 77653                 57999999876 5555544433


Q ss_pred             CCCCH------------------HHHHHHHHHHHhhcccCcCCCCCHHHHHHH
Q 045577          327 GPFSA------------------DELVKCIEVGLLCVQQRIEDWPTMSSVLTM  361 (392)
Q Consensus       327 ~~~~~------------------~~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~  361 (392)
                      .....                  .....+.+++..|++.||++|||+.++++.
T Consensus       222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dp~~Rpt~~e~l~h  274 (343)
T 3dbq_A          222 QIINQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAH  274 (343)
T ss_dssp             TCCSHHHHHHHHHCTTSCCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred             hhhhHHHHHHHHhcCCcccCCcccCCHHHHHHHHHHcCCChhHCCCHHHHHhC
Confidence            22111                  111356678889999999999999999864

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}

Probab=99.84  E-value=8.8e-22  Score=186.02  Aligned_cols=155  Identities=23%  Similarity=0.299  Sum_probs=116.5

Q ss_pred             CeeEEecCccCCCcChhhhhhhc-cccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEcCCCCCeEeeeeceE
Q 045577          200 EVFLMFEGIKLPDKSEFTCEFEC-SKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEINPNISDFGPAR  278 (392)
Q Consensus       200 ~~~lv~e~~~~~~l~~~~~~~~~-~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~~~~~~kl~DFGla~  278 (392)
                      ..+++|||+.+ ++......... ......+..++.|++.||.|||+.   +|+||||||+||+++.++.+||+|||+++
T Consensus        93 ~~~lv~e~~~~-~L~~~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~  168 (308)
T 3g33_A           93 KVTLVFEHVDQ-DLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHAN---CIVHRDLKPENILVTSGGTVKLADFGLAR  168 (308)
T ss_dssp             EEEEEEECCCC-BHHHHHHTCCTTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCTTTEEECTTSCEEECSCSCTT
T ss_pred             eEEEEehhhhc-CHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEcCCCCEEEeeCcccc
Confidence            37999999984 66554433222 245556889999999999999998   89999999999999999999999999987


Q ss_pred             EeCCCCcceeceeeecccccCchhHHH------HHHHhcCCCcc-eeecccccCCCCCCHHHH-----------------
Q 045577          279 IFGDQTEEVTGRVIGTQTLKTVPELLQ------AWKLWSEGDPM-EIIDEQTKMKGPFSADEL-----------------  334 (392)
Q Consensus       279 ~~~~~~~~~~~~~~gt~~y~a~~~~~~------~~diws~G~v~-~~ld~~~~~~~~~~~~~~-----------------  334 (392)
                      .....  .......||+.|+| ||...      +.|+|+.|+++ +++.+.+.+.+....+..                 
T Consensus       169 ~~~~~--~~~~~~~gt~~y~a-PE~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~  245 (308)
T 3g33_A          169 IYSYQ--MALTPVVVTLWYRA-PEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPR  245 (308)
T ss_dssp             TSTTC--CCSGGGGCCCSSCC-HHHHHTSCCCSTHHHHHHHHHHHHTTTSSCSCCCSSHHHHHHHHHHHHCCCCTTTSCS
T ss_pred             ccCCC--cccCCccccccccC-chHHcCCCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhccc
Confidence            65422  22234578999999 77653      68999999876 556555444433322222                 


Q ss_pred             -------------------------HHHHHHHHhhcccCcCCCCCHHHHHHH
Q 045577          335 -------------------------VKCIEVGLLCVQQRIEDWPTMSSVLTM  361 (392)
Q Consensus       335 -------------------------~~~~~i~~~Cl~~dp~~RPsm~eVv~~  361 (392)
                                               ..+.+++..|++.||++|||+.++++.
T Consensus       246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h  297 (308)
T 3g33_A          246 DVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQH  297 (308)
T ss_dssp             SCSSCGGGSCCCCCCCHHHHSCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred             hhhccccccCCCCCCcHHHhCccccHHHHHHHHHHhcCCCccCCCHHHHhcC
Confidence                                     234567889999999999999998763

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A

Probab=99.84  E-value=2.6e-21  Score=187.74  Aligned_cols=169  Identities=18%  Similarity=0.217  Sum_probs=127.6

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEc
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLD  264 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~  264 (392)
                      |++.++........+..|+||||++++++........ ......+..++.|++.||.|||+.   +++||||||+||+++
T Consensus       159 hp~iv~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~-~l~~~~~~~i~~qi~~~L~~LH~~---gi~H~Dlkp~NIl~~  234 (365)
T 2y7j_A          159 HPHIITLIDSYESSSFMFLVFDLMRKGELFDYLTEKV-ALSEKETRSIMRSLLEAVSFLHAN---NIVHRDLKPENILLD  234 (365)
T ss_dssp             CTTBCCEEEEEEBSSEEEEEECCCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEC
T ss_pred             CCCEeEEEEEEeeCCEEEEEEEeCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEC
Confidence            5666655544434567899999999998877554332 234455788999999999999998   899999999999999


Q ss_pred             CCCCCeEeeeeceEEeCCCCcceeceeeecccccCchhHHH------------HHHHhcCCCcc-eeecccccCCCCCCH
Q 045577          265 AEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELLQ------------AWKLWSEGDPM-EIIDEQTKMKGPFSA  331 (392)
Q Consensus       265 ~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~~------------~~diws~G~v~-~~ld~~~~~~~~~~~  331 (392)
                      .++.+||+|||++..+....  ......||+.|+| ||+..            +.|+|++|+++ +++.+..++......
T Consensus       235 ~~~~ikl~DfG~~~~~~~~~--~~~~~~gt~~y~a-PE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~  311 (365)
T 2y7j_A          235 DNMQIRLSDFGFSCHLEPGE--KLRELCGTPGYLA-PEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQI  311 (365)
T ss_dssp             TTCCEEECCCTTCEECCTTC--CBCCCCSCGGGCC-HHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHH
T ss_pred             CCCCEEEEecCcccccCCCc--ccccCCCCCCccC-hhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCCCCHH
Confidence            99999999999998865322  2234679999999 77654            58999999877 566654444322111


Q ss_pred             HH-------------------HHHHHHHHHhhcccCcCCCCCHHHHHH
Q 045577          332 DE-------------------LVKCIEVGLLCVQQRIEDWPTMSSVLT  360 (392)
Q Consensus       332 ~~-------------------~~~~~~i~~~Cl~~dp~~RPsm~eVv~  360 (392)
                      ..                   ...+.+++..|++.||++||++.++++
T Consensus       312 ~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~  359 (365)
T 2y7j_A          312 LMLRMIMEGQYQFSSPEWDDRSSTVKDLISRLLQVDPEARLTAEQALQ  359 (365)
T ss_dssp             HHHHHHHHTCCCCCHHHHSSSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred             HHHHHHHhCCCCCCCcccccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence            11                   123667888999999999999999986

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*

Probab=99.84  E-value=1.1e-21  Score=196.64  Aligned_cols=167  Identities=20%  Similarity=0.216  Sum_probs=117.5

Q ss_pred             CCCccccccCcC------CCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeeccccc
Q 045577          185 SGGCKRNWEADC------GDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKT  258 (392)
Q Consensus       185 s~GCvR~~~l~C------~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp  258 (392)
                      |++.++......      ...+.|+||||++++...... .   ......+..++.|++.||.|||+.   +|+||||||
T Consensus       120 hpnIv~l~~~~~~~~~~~~~~~~~lv~E~~~~~l~~~~~-~---~l~~~~~~~~~~qil~aL~~lH~~---~iiHrDlkp  192 (464)
T 3ttj_A          120 HKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQ-M---ELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKP  192 (464)
T ss_dssp             CTTBCCCSEEECSCCSTTTCCEEEEEEECCSEEHHHHHT-S---CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCG
T ss_pred             CCCCCcEEEEEccCCccccCCeEEEEEeCCCCCHHHHHh-h---cCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCh
Confidence            556665544331      124579999999865332221 1   134445788999999999999998   899999999


Q ss_pred             ceeEEcCCCCCeEeeeeceEEeCCCCcceeceeeecccccCchhHH------HHHHHhcCCCcc-eeecccccCCCCCCH
Q 045577          259 SNVLLDAEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIIDEQTKMKGPFSA  331 (392)
Q Consensus       259 ~NIll~~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld~~~~~~~~~~~  331 (392)
                      +|||++.++.+||+|||+++.....  .......||+.|+| ||+.      .+.|+|+.|+++ +++.+++.+.+....
T Consensus       193 ~NIll~~~~~~kl~DFG~a~~~~~~--~~~~~~~gt~~y~a-PE~~~~~~~~~~~DiwSlG~il~ell~g~~pF~g~~~~  269 (464)
T 3ttj_A          193 SNIVVKSDCTLKILDFGLARTAGTS--FMMTPYVVTRYYRA-PEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYI  269 (464)
T ss_dssp             GGEEECTTSCEEECCCCCC-----C--CCC----CCCTTCC-HHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHH
T ss_pred             HhEEEeCCCCEEEEEEEeeeecCCC--cccCCCcccccccC-HHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCCCCCCHH
Confidence            9999999999999999999876422  22334689999999 7765      378999999987 566665555433211


Q ss_pred             HH---------------------------------------------------------HHHHHHHHHhhcccCcCCCCC
Q 045577          332 DE---------------------------------------------------------LVKCIEVGLLCVQQRIEDWPT  354 (392)
Q Consensus       332 ~~---------------------------------------------------------~~~~~~i~~~Cl~~dp~~RPs  354 (392)
                      ++                                                         ...+.+++..|++.||++|||
T Consensus       270 ~~~~~i~~~lg~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~t  349 (464)
T 3ttj_A          270 DQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRIS  349 (464)
T ss_dssp             HHHHHHHHHHCSCCHHHHTTSCHHHHHHHTTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCC
T ss_pred             HHHHHHHHhcCCCCHHHHHHcchhhhhHhhcccccCCCChHHhCcccccccccccccccCHHHHHHHHHHcCCChhhCCC
Confidence            11                                                         234677888999999999999


Q ss_pred             HHHHHHH
Q 045577          355 MSSVLTM  361 (392)
Q Consensus       355 m~eVv~~  361 (392)
                      +.|+++.
T Consensus       350 a~e~L~H  356 (464)
T 3ttj_A          350 VDDALQH  356 (464)
T ss_dssp             HHHHHTS
T ss_pred             HHHHhcC
Confidence            9998864

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C

Probab=99.84  E-value=4.4e-22  Score=195.70  Aligned_cols=157  Identities=17%  Similarity=0.157  Sum_probs=114.1

Q ss_pred             CCeeEEecCccCCCcChhhhhhhc-cccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEcC---CCCCeEeee
Q 045577          199 GEVFLMFEGIKLPDKSEFTCEFEC-SKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDA---EINPNISDF  274 (392)
Q Consensus       199 ~~~~lv~e~~~~~~l~~~~~~~~~-~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~~---~~~~kl~DF  274 (392)
                      +..|+||||++++++.....+... ...+..+..|+.||+.||.|||+.   +|+||||||+|||++.   ++.+||+||
T Consensus       132 ~~~~lv~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~~~~kl~DF  208 (400)
T 1nxk_A          132 KCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDF  208 (400)
T ss_dssp             EEEEEEEECCCSEEHHHHHHCC---CCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSTTCCEEECCC
T ss_pred             cEEEEEEEeCCCCcHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCcCcceEEEecCCCCccEEEEec
Confidence            458999999999999776554321 235556889999999999999998   8999999999999987   788999999


Q ss_pred             eceEEeCCCCcceeceeeecccccCchhHH------HHHHHhcCCCcc-eeecccccCCCCCC-----------------
Q 045577          275 GPARIFGDQTEEVTGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIIDEQTKMKGPFS-----------------  330 (392)
Q Consensus       275 Gla~~~~~~~~~~~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld~~~~~~~~~~-----------------  330 (392)
                      |+++......  ......||+.|+| ||+.      .+.|+|+.|+++ +++.+...+.+...                 
T Consensus       209 G~a~~~~~~~--~~~~~~gt~~y~a-PE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~i~~~~~~  285 (400)
T 1nxk_A          209 GFAKETTSHN--SLTTPCYTPYYVA-PEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYE  285 (400)
T ss_dssp             TTCEECC-------------CTTCC-GGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSSCCSHHHHHHHTCCC
T ss_pred             ccccccCCCC--ccccCCCCCCccC-HhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCCCccccccHHHHHHHHcCccc
Confidence            9998764221  2234678999999 6654      478999999977 55555443322110                 


Q ss_pred             ------HHHHHHHHHHHHhhcccCcCCCCCHHHHHHH
Q 045577          331 ------ADELVKCIEVGLLCVQQRIEDWPTMSSVLTM  361 (392)
Q Consensus       331 ------~~~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~  361 (392)
                            ......+.+++..|++.||++|||+.++++.
T Consensus       286 ~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~eil~h  322 (400)
T 1nxk_A          286 FPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNH  322 (400)
T ss_dssp             CCTTTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred             CCCcccccCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence                  1122356778889999999999999999874

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*

Probab=99.84  E-value=8.3e-22  Score=191.46  Aligned_cols=153  Identities=9%  Similarity=-0.010  Sum_probs=113.7

Q ss_pred             CCeeEEecCccCCCcChhhhhhhccccchhh------hhHHHHHHHhhhhcCcCCCCceeecccccceeEEcCCCCCeEe
Q 045577          199 GEVFLMFEGIKLPDKSEFTCEFECSKYSSYV------TNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEINPNIS  272 (392)
Q Consensus       199 ~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~------~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~~~~~~kl~  272 (392)
                      ...|+||||++ +++...............+      ..++.|++.||.|||++   +|+||||||+|||++.++.+||+
T Consensus       161 ~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~vk~~i~~qi~~aL~~LH~~---~ivHrDikp~NIll~~~~~~kL~  236 (371)
T 3q60_A          161 ANYLLLMPAAS-VDLELLFSTLDFVYVFRGDEGILALHILTAQLIRLAANLQSK---GLVHGHFTPDNLFIMPDGRLMLG  236 (371)
T ss_dssp             EEEEEEECCCS-EEHHHHHHHHHHSCCCCHHHHHHHHHHHHHHHHHHHHHHHHT---TEEETTCSGGGEEECTTSCEEEC
T ss_pred             eeEEEEecCCC-CCHHHHHHHhccccchhhhhhhhhHHHHHHHHHHHHHHHHHC---CCccCcCCHHHEEECCCCCEEEE
Confidence            34899999999 7887755543333333334      56779999999999998   89999999999999999999999


Q ss_pred             eeeceEEeCCCCcceeceeeecccccCchhHH--------HHHHHhcCCCcc-eeecccccCCCCC--------------
Q 045577          273 DFGPARIFGDQTEEVTGRVIGTQTLKTVPELL--------QAWKLWSEGDPM-EIIDEQTKMKGPF--------------  329 (392)
Q Consensus       273 DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~--------~~~diws~G~v~-~~ld~~~~~~~~~--------------  329 (392)
                      |||+++....    ......+|+.|+| ||+.        .+.|+|+.|+++ +++.++.++.+..              
T Consensus       237 DFG~a~~~~~----~~~~~~~t~~y~a-PE~~~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~~~~~~~~  311 (371)
T 3q60_A          237 DVSALWKVGT----RGPASSVPVTYAP-REFLNASTATFTHALNAWQLGLSIYRVWCLFLPFGLVTPGIKGSWKRPSLRV  311 (371)
T ss_dssp             CGGGEEETTC----EEEGGGSCGGGCC-HHHHTCSEEECCHHHHHHHHHHHHHHHHHSSCSTTBCCTTCTTCCCBCCTTS
T ss_pred             ecceeeecCC----CccCccCCcCCcC-hhhccCCCCCcCccccHHHHHHHHHHHHhCCCCCCCcCcccccchhhhhhhh
Confidence            9999987542    1113456799999 7655        378999999876 4444433322210              


Q ss_pred             --------C--HHHHHHHHHHHHhhcccCcCCCCCHHHHHH
Q 045577          330 --------S--ADELVKCIEVGLLCVQQRIEDWPTMSSVLT  360 (392)
Q Consensus       330 --------~--~~~~~~~~~i~~~Cl~~dp~~RPsm~eVv~  360 (392)
                              +  ......+.+++..|++.||++||++.++++
T Consensus       312 ~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~  352 (371)
T 3q60_A          312 PGTDSLAFGSCTPLPDFVKTLIGRFLNFDRRRRLLPLEAME  352 (371)
T ss_dssp             CCCCSCCCTTSSCCCHHHHHHHHHHTCSSTTTCCCHHHHTT
T ss_pred             ccccccchhhccCCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence                    0  122345677888999999999999999864

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B

Probab=99.84  E-value=1e-21  Score=190.44  Aligned_cols=170  Identities=17%  Similarity=0.160  Sum_probs=126.7

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEc
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLD  264 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~  264 (392)
                      |++.++.......++..|+||||++++++......... ..+..+..++.||+.||.|||+.   +|+||||||+||+++
T Consensus        87 hpnIv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~-~~~~~~~~~~~qi~~al~~lH~~---~ivH~Dlkp~NIll~  162 (362)
T 2bdw_A           87 HPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREF-YSEADASHCIQQILESIAYCHSN---GIVHRNLKPENLLLA  162 (362)
T ss_dssp             CTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHTTCSC-CCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEES
T ss_pred             CCCCCeEEEEEEeCCEEEEEEecCCCCCHHHHHHHcCC-CCHHHHHHHHHHHHHHHHHHHHC---CeEeccCchHHEEEe
Confidence            67777766655556778999999999998765544332 34455788999999999999998   899999999999997


Q ss_pred             CCC---CCeEeeeeceEEeCCCCcceeceeeecccccCchhHH------HHHHHhcCCCcc-eeecccccCCCCCCH---
Q 045577          265 AEI---NPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIIDEQTKMKGPFSA---  331 (392)
Q Consensus       265 ~~~---~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld~~~~~~~~~~~---  331 (392)
                      .++   .+||+|||+++......  ......||+.|+| ||+.      .+.|+|+.|+++ +++.+.+++.+....   
T Consensus       163 ~~~~~~~~kl~DfG~a~~~~~~~--~~~~~~gt~~y~a-PE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~~  239 (362)
T 2bdw_A          163 SKAKGAAVKLADFGLAIEVNDSE--AWHGFAGTPGYLS-PEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLY  239 (362)
T ss_dssp             CSSTTCCEEECCCTTCBCCTTCC--SCCCSCSCTTTCC-HHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHH
T ss_pred             cCCCCCCEEEeecCcceEecCCc--ccccCCCCccccC-HHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHH
Confidence            654   59999999998764222  2233579999999 7765      378999999877 455554443322111   


Q ss_pred             ----------------HHHHHHHHHHHhhcccCcCCCCCHHHHHHH
Q 045577          332 ----------------DELVKCIEVGLLCVQQRIEDWPTMSSVLTM  361 (392)
Q Consensus       332 ----------------~~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~  361 (392)
                                      .....+.+++..|++.||++||++.++++.
T Consensus       240 ~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h  285 (362)
T 2bdw_A          240 AQIKAGAYDYPSPEWDTVTPEAKSLIDSMLTVNPKKRITADQALKV  285 (362)
T ss_dssp             HHHHHTCCCCCTTGGGGSCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred             HHHHhCCCCCCcccccCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence                            112356678889999999999999998753

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}

Probab=99.83  E-value=1.4e-21  Score=185.84  Aligned_cols=158  Identities=15%  Similarity=0.228  Sum_probs=115.3

Q ss_pred             CCeeEEecCccCCCcChhhhhhhccc--cchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEcCCCCCeEeeeec
Q 045577          199 GEVFLMFEGIKLPDKSEFTCEFECSK--YSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEINPNISDFGP  276 (392)
Q Consensus       199 ~~~~lv~e~~~~~~l~~~~~~~~~~~--~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~~~~~~kl~DFGl  276 (392)
                      ...|++|||++++++.....+.....  .+..+..++.|++.||.|||++   +|+||||||+||+++.++.+||+|||+
T Consensus       134 ~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~DfG~  210 (332)
T 3qd2_B          134 VYLYIQMQLCRKENLKDWMNRRCSLEDREHGVCLHIFIQIAEAVEFLHSK---GLMHRDLKPSNIFFTMDDVVKVGDFGL  210 (332)
T ss_dssp             CEEEEEEECCCSSCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTT
T ss_pred             ceEEEEEEecCCCCHHHHHhcccCccchhhHHHHHHHHHHHHHHHHHHhC---CeeecCCCcccEEEeCCCCEEEeecCc
Confidence            34799999999999987554432222  2223688999999999999998   899999999999999999999999999


Q ss_pred             eEEeCCCCc-----------ceeceeeecccccCchhHHH------HHHHhcCCCcc-eeecccccC-----------CC
Q 045577          277 ARIFGDQTE-----------EVTGRVIGTQTLKTVPELLQ------AWKLWSEGDPM-EIIDEQTKM-----------KG  327 (392)
Q Consensus       277 a~~~~~~~~-----------~~~~~~~gt~~y~a~~~~~~------~~diws~G~v~-~~ld~~~~~-----------~~  327 (392)
                      ++.......           .......||+.|+| ||...      +.|+|+.|+++ +++.+....           ..
T Consensus       211 a~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~a-PE~~~~~~~~~~~Di~slG~il~el~~~~~~~~~~~~~~~~~~~~  289 (332)
T 3qd2_B          211 VTAMDQDEEEQTVLTPMPAYATHTGQVGTKLYMS-PEQIHGNNYSHKVDIFSLGLILFELLYSFSTQMERVRIITDVRNL  289 (332)
T ss_dssp             CEECSCC--------------CCCSCC-CGGGSC-HHHHHCCCCCTHHHHHHHHHHHHHHHSCCCCHHHHHHHHHHHHTT
T ss_pred             ccccccchhhccccccccccccccccCCCcCccC-hHHhcCCCCcchhhHHHHHHHHHHHHHcCCChhHHHHHHHHhhcc
Confidence            998763211           11223579999999 77653      78999999876 444331110           01


Q ss_pred             CCC---HHHHHHHHHHHHhhcccCcCCCCCHHHHHH
Q 045577          328 PFS---ADELVKCIEVGLLCVQQRIEDWPTMSSVLT  360 (392)
Q Consensus       328 ~~~---~~~~~~~~~i~~~Cl~~dp~~RPsm~eVv~  360 (392)
                      ..+   ......+.+++..|++.||++||++.++++
T Consensus       290 ~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~  325 (332)
T 3qd2_B          290 KFPLLFTQKYPQEHMMVQDMLSPSPTERPEATDIIE  325 (332)
T ss_dssp             CCCHHHHHHCHHHHHHHHHHHCSSGGGSCCHHHHHH
T ss_pred             CCCcccccCChhHHHHHHHHccCCCCcCCCHHHHhh
Confidence            111   112235567888999999999999999986

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}

Probab=99.83  E-value=2.2e-21  Score=187.18  Aligned_cols=170  Identities=19%  Similarity=0.174  Sum_probs=119.6

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEc
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLD  264 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~  264 (392)
                      |++.++........+..+++|||++++++.....+... .....+..++.|++.||.|||+.   +|+||||||+||+++
T Consensus       107 h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~-~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dikp~NIll~  182 (349)
T 2w4o_A          107 HPNIIKLKEIFETPTEISLVLELVTGGELFDRIVEKGY-YSERDAADAVKQILEAVAYLHEN---GIVHRDLKPENLLYA  182 (349)
T ss_dssp             CTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHTTCSS-CCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEES
T ss_pred             CCCCcceeeeEecCCeEEEEEEeCCCCCHHHHHHhcCC-CCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCcccEEEe
Confidence            66777666655555678999999999998765544322 34455789999999999999998   899999999999997


Q ss_pred             C---CCCCeEeeeeceEEeCCCCcceeceeeecccccCchhHH------HHHHHhcCCCcc-eeecccccCCCCCCHH--
Q 045577          265 A---EINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIIDEQTKMKGPFSAD--  332 (392)
Q Consensus       265 ~---~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld~~~~~~~~~~~~--  332 (392)
                      .   ++.+||+|||+++.....  .......||+.|+| ||+.      .+.|+|+.|+++ +++.+..++......+  
T Consensus       183 ~~~~~~~~kl~Dfg~a~~~~~~--~~~~~~~gt~~y~a-PE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~  259 (349)
T 2w4o_A          183 TPAPDAPLKIADFGLSKIVEHQ--VLMKTVCGTPGYCA-PEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQFM  259 (349)
T ss_dssp             SSSTTCCEEECCCC------------------CGGGSC-HHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCTTCHHHH
T ss_pred             cCCCCCCEEEccCccccccCcc--cccccccCCCCccC-HHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCcccHHH
Confidence            5   889999999999875422  12234679999999 7765      378999999877 5555544443322221  


Q ss_pred             ------------------HHHHHHHHHHhhcccCcCCCCCHHHHHHH
Q 045577          333 ------------------ELVKCIEVGLLCVQQRIEDWPTMSSVLTM  361 (392)
Q Consensus       333 ------------------~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~  361 (392)
                                        ....+.+++..|++.||++||++.++++.
T Consensus       260 ~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h  306 (349)
T 2w4o_A          260 FRRILNCEYYFISPWWDEVSLNAKDLVRKLIVLDPKKRLTTFQALQH  306 (349)
T ss_dssp             HHHHHTTCCCCCTTTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred             HHHHHhCCCccCCchhhhCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence                              12346678889999999999999999874

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A

Probab=99.83  E-value=9.5e-22  Score=186.22  Aligned_cols=172  Identities=15%  Similarity=0.142  Sum_probs=121.4

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEc
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLD  264 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~  264 (392)
                      |++.++.......++..|+||||++++++.....+... .....+..++.|++.||.|||+.   +|+||||||+||+++
T Consensus        70 h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~-~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~  145 (316)
T 2ac3_A           70 HRNVLELIEFFEEEDRFYLVFEKMRGGSILSHIHKRRH-FNELEASVVVQDVASALDFLHNK---GIAHRDLKPENILCE  145 (316)
T ss_dssp             CTTBCCEEEEEEETTEEEEEEECCTTCBHHHHHHHHSS-CCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEES
T ss_pred             CCCeeeEEEEEeeCCEEEEEEEcCCCCcHHHHHhccCC-CCHHHHHHHHHHHHHHHHHHHhC---CceeCCCCHHHEEEc
Confidence            55555555444445678999999999998776544332 34445788999999999999998   899999999999998


Q ss_pred             CCCC---CeEeeeeceEEeCCCC------cceeceeeecccccCchhHHH-----------HHHHhcCCCcc-eeecccc
Q 045577          265 AEIN---PNISDFGPARIFGDQT------EEVTGRVIGTQTLKTVPELLQ-----------AWKLWSEGDPM-EIIDEQT  323 (392)
Q Consensus       265 ~~~~---~kl~DFGla~~~~~~~------~~~~~~~~gt~~y~a~~~~~~-----------~~diws~G~v~-~~ld~~~  323 (392)
                      .++.   +||+|||+++......      ........||+.|+| ||+..           +.|+|+.|+++ +++.+..
T Consensus       146 ~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~a-PE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~  224 (316)
T 2ac3_A          146 HPNQVSPVKICDFDLGSGIKLNGDCSPISTPELLTPCGSAEYMA-PEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYP  224 (316)
T ss_dssp             CSSSSCSEEECCTTCCC-------------------CCSGGGCC-HHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSC
T ss_pred             cCCCcCceEEEEccCccccccCCccccccccccccccCCcCccC-hHHhhcccccccCCCcccccHhHHHHHHHHHHCCC
Confidence            8766   8999999987653111      111223569999999 77653           46999999977 5555544


Q ss_pred             cCCCCCC------------------------------HH----HHHHHHHHHHhhcccCcCCCCCHHHHHHH
Q 045577          324 KMKGPFS------------------------------AD----ELVKCIEVGLLCVQQRIEDWPTMSSVLTM  361 (392)
Q Consensus       324 ~~~~~~~------------------------------~~----~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~  361 (392)
                      ++.+...                              ..    ....+.+++.+|++.||++||++.++++.
T Consensus       225 pf~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~h  296 (316)
T 2ac3_A          225 PFVGRCGSDCGWDRGEACPACQNMLFESIQEGKYEFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQH  296 (316)
T ss_dssp             SCCCCCCSCSCC----CCHHHHHHHHHHHHHCCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred             CCcccccccccccccccchhHHHHHHHHHhccCcccCchhcccCCHHHHHHHHHHhhCChhhCCCHHHHhcC
Confidence            4433211                              00    12246678889999999999999999874

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*

Probab=99.83  E-value=1.5e-21  Score=186.44  Aligned_cols=170  Identities=18%  Similarity=0.149  Sum_probs=123.3

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEc
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLD  264 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~  264 (392)
                      |++.++.......++..|++|||++++++.....+... .....+..++.|++.||.|||+.   +|+||||||+||+++
T Consensus        80 hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~qi~~al~~lH~~---~ivH~Dlkp~Nill~  155 (327)
T 3a62_A           80 HPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGI-FMEDTACFYLAEISMALGHLHQK---GIIYRDLKPENIMLN  155 (327)
T ss_dssp             CTTBCCEEEEEECSSCEEEEEECCTTEEHHHHHHHHSS-CCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCTTTEEEC
T ss_pred             CCCccceeEEEEcCCEEEEEEeCCCCCcHHHHHHhCCC-CCHHHHHHHHHHHHHHHHHHHhC---CEEcccCCHHHeEEC
Confidence            66666665555556789999999999988765544332 34445788999999999999998   899999999999999


Q ss_pred             CCCCCeEeeeeceEEeCCCCcceeceeeecccccCchhHH------HHHHHhcCCCcc-eeecccccCCCCCCHHH----
Q 045577          265 AEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIIDEQTKMKGPFSADE----  333 (392)
Q Consensus       265 ~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld~~~~~~~~~~~~~----  333 (392)
                      .++.+||+|||+++...... .......||+.|+| ||+.      .+.|+|+.|+++ +++.+..++.+....+.    
T Consensus       156 ~~~~~kl~Dfg~~~~~~~~~-~~~~~~~gt~~y~a-PE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i  233 (327)
T 3a62_A          156 HQGHVKLTDFGLCKESIHDG-TVTHTFCGTIEYMA-PEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKI  233 (327)
T ss_dssp             TTSCEEECCCSCC-----------CTTSSCCTTSC-HHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHH
T ss_pred             CCCcEEEEeCCcccccccCC-ccccccCCCcCccC-HhhCcCCCCCCcccchhHHHHHHHHHHCCCCCCCCCHHHHHHHH
Confidence            99999999999997643211 12233578999999 7765      378999999977 56666444433322211    


Q ss_pred             -----------HHHHHHHHHhhcccCcCCCC-----CHHHHHH
Q 045577          334 -----------LVKCIEVGLLCVQQRIEDWP-----TMSSVLT  360 (392)
Q Consensus       334 -----------~~~~~~i~~~Cl~~dp~~RP-----sm~eVv~  360 (392)
                                 ...+.+++..|++.||++||     ++.++++
T Consensus       234 ~~~~~~~p~~~~~~~~~li~~~L~~dp~~R~~~~~~~~~e~l~  276 (327)
T 3a62_A          234 LKCKLNLPPYLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQA  276 (327)
T ss_dssp             HHTCCCCCTTSCHHHHHHHHHHSCSCGGGSTTSSTTTHHHHHH
T ss_pred             HhCCCCCCCCCCHHHHHHHHHHHhcCHhhccCCCCCCHHHHHc
Confidence                       23456788899999999999     6777765

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}

Probab=99.83  E-value=1.5e-21  Score=186.05  Aligned_cols=177  Identities=18%  Similarity=0.191  Sum_probs=127.0

Q ss_pred             CCCccccccCcCC--CCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeE
Q 045577          185 SGGCKRNWEADCG--DGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVL  262 (392)
Q Consensus       185 s~GCvR~~~l~C~--~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIl  262 (392)
                      |++.++.......  ....+++|||++++++...............+..++.|++.||.|||+.   +|+||||||+||+
T Consensus       101 h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dikp~NIl  177 (326)
T 2w1i_A          101 HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNIL  177 (326)
T ss_dssp             CTTBCCEEEEECC----CCEEEECCCTTCBHHHHHHHSTTSSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEE
T ss_pred             CCCeeeEEEEEEecCCCceEEEEECCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhC---CEeccCCCcceEE
Confidence            4455544333221  2368999999999999876554433345555788999999999999998   8999999999999


Q ss_pred             EcCCCCCeEeeeeceEEeCCCCcc--eeceeeecccccCchhHH------HHHHHhcCCCcc-eeecccccCC-------
Q 045577          263 LDAEINPNISDFGPARIFGDQTEE--VTGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIIDEQTKMK-------  326 (392)
Q Consensus       263 l~~~~~~kl~DFGla~~~~~~~~~--~~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld~~~~~~-------  326 (392)
                      ++.++.+||+|||+++........  ......++..|+| ||..      .+.|+|+.|+++ +++.+.....       
T Consensus       178 i~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~a-PE~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~  256 (326)
T 2w1i_A          178 VENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWYA-PESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFM  256 (326)
T ss_dssp             EEETTEEEECCCTTCEECCSSCSEEECSSCCSCCGGGCC-HHHHHHCEEEHHHHHHHHHHHHHHHHHTTCGGGSHHHHHH
T ss_pred             EcCCCcEEEecCcchhhccccccccccccCCCCceeEEC-chhhcCCCCCchhhHHHHHHHHHHHHhcCCCCCCCHHHHH
Confidence            999999999999999987533221  1222456778999 7765      478999999876 4444311110       


Q ss_pred             -------------------------CCCCHHHHHHHHHHHHhhcccCcCCCCCHHHHHHHHccC
Q 045577          327 -------------------------GPFSADELVKCIEVGLLCVQQRIEDWPTMSSVLTMLSNE  365 (392)
Q Consensus       327 -------------------------~~~~~~~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~L~~~  365 (392)
                                               .+.+......+.+++..|++.+|++||++.+|++.|+..
T Consensus       257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~el~~~L~~l  320 (326)
T 2w1i_A          257 RMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQI  320 (326)
T ss_dssp             HHHCTTCCTHHHHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHH
T ss_pred             HhhccccchhhhHHHHHHHhhcCCCCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence                                     001111224566788899999999999999999999864

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}

Probab=99.83  E-value=1.5e-21  Score=195.05  Aligned_cols=130  Identities=21%  Similarity=0.312  Sum_probs=92.3

Q ss_pred             CCCccccccCc-----CCCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccc
Q 045577          185 SGGCKRNWEAD-----CGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTS  259 (392)
Q Consensus       185 s~GCvR~~~l~-----C~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~  259 (392)
                      |++.++.....     ......|+||||+. +++....... .......+..++.||+.||.|||+.   +|+||||||+
T Consensus       111 h~niv~l~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~~-~~l~~~~~~~~~~qi~~aL~~LH~~---~iiHrDlKp~  185 (458)
T 3rp9_A          111 HDHVVKVLDIVIPKDVEKFDELYVVLEIAD-SDFKKLFRTP-VYLTELHIKTLLYNLLVGVKYVHSA---GILHRDLKPA  185 (458)
T ss_dssp             CTTBCCEEEECCCSCTTTCCCEEEEECCCS-EEHHHHHHSS-CCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGG
T ss_pred             CCCCCceEEEEecCCcccCceEEEEEeccc-cchhhhcccC-CCCCHHHHHHHHHHHHHHHHHHHhC---CcCCCCCChh
Confidence            56666554433     12256899999986 4554433322 2234555788999999999999998   8999999999


Q ss_pred             eeEEcCCCCCeEeeeeceEEeCCCCc--------------------------ceeceeeecccccCchhHH-------HH
Q 045577          260 NVLLDAEINPNISDFGPARIFGDQTE--------------------------EVTGRVIGTQTLKTVPELL-------QA  306 (392)
Q Consensus       260 NIll~~~~~~kl~DFGla~~~~~~~~--------------------------~~~~~~~gt~~y~a~~~~~-------~~  306 (392)
                      |||++.++.+||+|||+++.......                          ......+||+.|+| ||+.       .+
T Consensus       186 NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~a-PE~~~~~~~~~~~  264 (458)
T 3rp9_A          186 NCLVNQDCSVKVCDFGLARTVDYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRA-PELILLQENYTEA  264 (458)
T ss_dssp             GEEECTTCCEEECCCTTCBCTTSCTTCCCCCC---------------------------CCCTTCC-HHHHTTCCCCCTH
T ss_pred             hEEECCCCCEeecccccchhccCccccccccccCccccccccccccccccccccccCCcccccccC-hHHhhCCCCCCcH
Confidence            99999999999999999987541110                          12234678999999 7754       37


Q ss_pred             HHHhcCCCcc-eeec
Q 045577          307 WKLWSEGDPM-EIID  320 (392)
Q Consensus       307 ~diws~G~v~-~~ld  320 (392)
                      .|+|+.|+++ +++.
T Consensus       265 ~DiwSlG~il~ellt  279 (458)
T 3rp9_A          265 IDVWSIGCIFAELLN  279 (458)
T ss_dssp             HHHHHHHHHHHHHHT
T ss_pred             hHHHHHHHHHHHHHH
Confidence            8999999987 4553

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*

Probab=99.83  E-value=3.4e-21  Score=179.19  Aligned_cols=168  Identities=13%  Similarity=0.130  Sum_probs=120.9

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhh---ccccchhhhhHHHHHHHhhhhcCcCCCCceeeccccccee
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFE---CSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNV  261 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~---~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NI  261 (392)
                      |++.++........+..+++|||++++++.....+..   .......+..++.|++.||.|||+.   +|+||||||+||
T Consensus        70 h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dikp~NI  146 (289)
T 1x8b_A           70 HSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSM---SLVHMDIKPSNI  146 (289)
T ss_dssp             CTTBCCEEEEEEETTEEEEEEECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGE
T ss_pred             CCCeeeeeeeeecCCeEEEEEEecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHHhC---CEeecCCCHHHE
Confidence            5555555544444567899999999999987554432   2234556889999999999999998   899999999999


Q ss_pred             EEcCC-------------------CCCeEeeeeceEEeCCCCcceeceeeecccccCchhHH-------HHHHHhcCCCc
Q 045577          262 LLDAE-------------------INPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELL-------QAWKLWSEGDP  315 (392)
Q Consensus       262 ll~~~-------------------~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~-------~~~diws~G~v  315 (392)
                      +++.+                   ..+||+|||++.......     ...||+.|+| ||..       .+.|+|+.|++
T Consensus       147 l~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~~-----~~~gt~~y~a-PE~~~~~~~~~~~~Di~slG~i  220 (289)
T 1x8b_A          147 FISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRISSPQ-----VEEGDSRFLA-NEVLQENYTHLPKADIFALALT  220 (289)
T ss_dssp             EEC--------------------CCCEEECCCTTCEETTCSC-----CCCCCGGGCC-HHHHTTCCTTHHHHHHHHHHHH
T ss_pred             EEcCCCCCcccccccccccccCCceEEEEcccccccccCCcc-----ccCCCccccC-hhHhcCCCCCCchhhHHHHHHH
Confidence            99844                   478999999998764321     2358999999 6654       47899999987


Q ss_pred             c-eeecccccCCC-------------CCCHHHHHHHHHHHHhhcccCcCCCCCHHHHHHH
Q 045577          316 M-EIIDEQTKMKG-------------PFSADELVKCIEVGLLCVQQRIEDWPTMSSVLTM  361 (392)
Q Consensus       316 ~-~~ld~~~~~~~-------------~~~~~~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~  361 (392)
                      + +++.+.+....             ..+......+.+++..|++.||++||++.++++.
T Consensus       221 l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h  280 (289)
T 1x8b_A          221 VVCAAGAEPLPRNGDQWHEIRQGRLPRIPQVLSQEFTELLKVMIHPDPERRPSAMALVKH  280 (289)
T ss_dssp             HHHHTTCCCCCSSSHHHHHHHTTCCCCCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHTC
T ss_pred             HHHHhcCCCCCcchhHHHHHHcCCCCCCCcccCHHHHHHHHHHhCCCcccCCCHHHHhhC
Confidence            7 33333221110             1111122356677889999999999999998753

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*

Probab=99.83  E-value=2.4e-21  Score=186.55  Aligned_cols=159  Identities=21%  Similarity=0.280  Sum_probs=116.5

Q ss_pred             CCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEcCCCCCeEeeeece
Q 045577          198 DGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEINPNISDFGPA  277 (392)
Q Consensus       198 ~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~~~~~~kl~DFGla  277 (392)
                      ++..|+||||+++ ++...............+..++.|++.||.|||+.   +|+||||||+||+++.++.+||+|||++
T Consensus        96 ~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a  171 (351)
T 3mi9_A           96 KGSIYLVFDFCEH-DLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLA  171 (351)
T ss_dssp             -CEEEEEEECCSE-EHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTC
T ss_pred             CceEEEEEeccCC-CHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCHHHEEEcCCCCEEEccchhc
Confidence            3568999999986 43333333222344555889999999999999998   8999999999999999999999999999


Q ss_pred             EEeCCC---CcceeceeeecccccCchhHH-------HHHHHhcCCCcc-eeecccccCCCCCCHHH-------------
Q 045577          278 RIFGDQ---TEEVTGRVIGTQTLKTVPELL-------QAWKLWSEGDPM-EIIDEQTKMKGPFSADE-------------  333 (392)
Q Consensus       278 ~~~~~~---~~~~~~~~~gt~~y~a~~~~~-------~~~diws~G~v~-~~ld~~~~~~~~~~~~~-------------  333 (392)
                      +.+...   .........||+.|+| ||+.       .+.|+|+.|+++ +++.+.+.+.+....+.             
T Consensus       172 ~~~~~~~~~~~~~~~~~~gt~~y~a-PE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~  250 (351)
T 3mi9_A          172 RAFSLAKNSQPNRYTNRVVTLWYRP-PELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITP  250 (351)
T ss_dssp             EECCCCSSSSCCCCCSSCSCGGGCC-HHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCT
T ss_pred             ccccccccccccccCCcccccCccC-chhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCh
Confidence            886521   1122233578999999 7754       378999999976 55555443333221111             


Q ss_pred             ----------------------------------HHHHHHHHHhhcccCcCCCCCHHHHHHH
Q 045577          334 ----------------------------------LVKCIEVGLLCVQQRIEDWPTMSSVLTM  361 (392)
Q Consensus       334 ----------------------------------~~~~~~i~~~Cl~~dp~~RPsm~eVv~~  361 (392)
                                                        ...+.+++..|++.||++|||+.|+++.
T Consensus       251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h  312 (351)
T 3mi9_A          251 EVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNH  312 (351)
T ss_dssp             TTSTTGGGCGGGTSSCCCSSCCCCHHHHHHHHHCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred             hhccccccchhhcccccccccccCHHHHhhhccCChHHHHHHHHHhcCChhhCCCHHHHhCC
Confidence                                              1235678889999999999999999874

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A

Probab=99.83  E-value=4.6e-21  Score=182.37  Aligned_cols=170  Identities=18%  Similarity=0.195  Sum_probs=126.4

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEc
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLD  264 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~  264 (392)
                      |++.++........+..|++|||++++++........ ......+..++.|++.||.|||+.   +|+||||||+||+++
T Consensus        74 h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~aL~~lH~~---~ivH~dikp~NIl~~  149 (321)
T 2a2a_A           74 HHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKE-SLSEEEATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLL  149 (321)
T ss_dssp             CTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHTCS-CEEHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEES
T ss_pred             CCCcceEEEEEecCCEEEEEEEcCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCChHHEEEe
Confidence            4555554444444567899999999999877654432 234455789999999999999998   899999999999999


Q ss_pred             CCC----CCeEeeeeceEEeCCCCcceeceeeecccccCchhHH------HHHHHhcCCCcc-eeecccccCCCCCCHHH
Q 045577          265 AEI----NPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIIDEQTKMKGPFSADE  333 (392)
Q Consensus       265 ~~~----~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld~~~~~~~~~~~~~  333 (392)
                      .++    .+||+|||+++......  ......||+.|+| ||..      .+.|+|+.|+++ +++.+..++.+....+.
T Consensus       150 ~~~~~~~~~kl~Dfg~~~~~~~~~--~~~~~~gt~~y~a-PE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~  226 (321)
T 2a2a_A          150 DKNIPIPHIKLIDFGLAHEIEDGV--EFKNIFGTPEFVA-PEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQET  226 (321)
T ss_dssp             CTTSSSCCEEECCCTTCEECCTTC--CCCCCCSCGGGCC-HHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHH
T ss_pred             cCCCCcCCEEEccCccceecCccc--cccccCCCCCccC-cccccCCCCCCccccHHHHHHHHHHHHCCCCCCCCCHHHH
Confidence            887    79999999998865322  2233578999999 7765      378999999876 55555444433221111


Q ss_pred             -------------------HHHHHHHHHhhcccCcCCCCCHHHHHHH
Q 045577          334 -------------------LVKCIEVGLLCVQQRIEDWPTMSSVLTM  361 (392)
Q Consensus       334 -------------------~~~~~~i~~~Cl~~dp~~RPsm~eVv~~  361 (392)
                                         ...+.+++..|++.||++||++.++++.
T Consensus       227 ~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~e~l~h  273 (321)
T 2a2a_A          227 LANITSVSYDFDEEFFSHTSELAKDFIRKLLVKETRKRLTIQEALRH  273 (321)
T ss_dssp             HHHHHTTCCCCCHHHHTTCCHHHHHHHHTTSCSSTTTSCCHHHHHHS
T ss_pred             HHHHHhcccccChhhhcccCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence                               1245678889999999999999999863

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A

Probab=99.83  E-value=1.5e-21  Score=190.04  Aligned_cols=150  Identities=11%  Similarity=0.111  Sum_probs=111.7

Q ss_pred             eeEEecCccCCCcChhhhhhhcccc------chhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEcCCCCCeEeee
Q 045577          201 VFLMFEGIKLPDKSEFTCEFECSKY------SSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEINPNISDF  274 (392)
Q Consensus       201 ~~lv~e~~~~~~l~~~~~~~~~~~~------~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~~~~~~kl~DF  274 (392)
                      .|++|||+. +++.....+......      ...+..|+.||+.||.|||++   +|+||||||+|||++.++.+||+||
T Consensus       175 ~~lv~E~~~-g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivHrDikp~NIll~~~~~~kL~DF  250 (377)
T 3byv_A          175 RFFLYPRMQ-SNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHY---GLVHTYLRPVDIVLDQRGGVFLTGF  250 (377)
T ss_dssp             EEEEEECCS-EEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTCCEEECCG
T ss_pred             EEEEEeccC-CCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEEec
Confidence            789999994 677765544332222      345678999999999999998   8999999999999999999999999


Q ss_pred             eceEEeCCCCcceeceeeecccccCchhHHH-----------------HHHHhcCCCcc-eeecccccCCCCCC------
Q 045577          275 GPARIFGDQTEEVTGRVIGTQTLKTVPELLQ-----------------AWKLWSEGDPM-EIIDEQTKMKGPFS------  330 (392)
Q Consensus       275 Gla~~~~~~~~~~~~~~~gt~~y~a~~~~~~-----------------~~diws~G~v~-~~ld~~~~~~~~~~------  330 (392)
                      |+++....    ......| +.|+| ||+..                 +.|+|++|+++ +++.+..++.+...      
T Consensus       251 G~a~~~~~----~~~~~~g-~~y~a-PE~~~~~~~~~~~~~~~~~~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~  324 (377)
T 3byv_A          251 EHLVRDGA----RVVSSVS-RGFEP-PELEARRATISYHRDRRTLMTFSFDAWALGLVIYWIWCADLPITKDAALGGSEW  324 (377)
T ss_dssp             GGCEETTC----EEECCCC-TTCCC-HHHHHHHTSTHHHHCCEEECCHHHHHHHHHHHHHHHHHSSCCC------CCSGG
T ss_pred             hhheecCC----cccCCCC-cCccC-hhhhcccccccccccccccCChhhhHHHHHHHHHHHHHCCCCCcccccccchhh
Confidence            99986432    2334567 99999 76653                 45999999977 55555433322110      


Q ss_pred             -----HHHHHHHHHHHHhhcccCcCCCCCHHHHHH
Q 045577          331 -----ADELVKCIEVGLLCVQQRIEDWPTMSSVLT  360 (392)
Q Consensus       331 -----~~~~~~~~~i~~~Cl~~dp~~RPsm~eVv~  360 (392)
                           ......+.+++..|++.||++||++.++++
T Consensus       325 ~~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~  359 (377)
T 3byv_A          325 IFRSCKNIPQPVRALLEGFLRYPKEDRLLPLQAME  359 (377)
T ss_dssp             GGSSCCCCCHHHHHHHHHHTCSSGGGCCCHHHHHT
T ss_pred             hhhhccCCCHHHHHHHHHHcCCCchhCCCHHHHhh
Confidence                 111235667788999999999999999885

>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}

Probab=99.83  E-value=1.4e-21  Score=188.31  Aligned_cols=164  Identities=13%  Similarity=0.097  Sum_probs=124.7

Q ss_pred             CCCeeEEecCccCCCcChhhhhh-hccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEcCCC--CCeEeee
Q 045577          198 DGEVFLMFEGIKLPDKSEFTCEF-ECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEI--NPNISDF  274 (392)
Q Consensus       198 ~~~~~lv~e~~~~~~l~~~~~~~-~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~~~~--~~kl~DF  274 (392)
                      ++..|++|||+ ++++....... ........+..++.|++.||.|||+.   +|+||||||+||+++.++  .+||+||
T Consensus       130 ~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dikp~NIl~~~~~~~~~kl~Df  205 (352)
T 2jii_A          130 DKYRFLVLPSL-GRSLQSALDVSPKHVLSERSVLQVACRLLDALEFLHEN---EYVHGNVTAENIFVDPEDQSQVTLAGY  205 (352)
T ss_dssp             TTEEEEEEECC-CEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCCGGGEEEETTEEEEEEECCG
T ss_pred             CcEEEEEecCC-CcCHHHHHHhCCcCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCHHHEEEcCCCCceEEEecC
Confidence            46689999999 88888765543 22345566899999999999999998   899999999999999988  8999999


Q ss_pred             eceEEeCCCCc------ceeceeeecccccCchhHH------HHHHHhcCCCcc-eeecccccCCCCC-CHHH-------
Q 045577          275 GPARIFGDQTE------EVTGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIIDEQTKMKGPF-SADE-------  333 (392)
Q Consensus       275 Gla~~~~~~~~------~~~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld~~~~~~~~~-~~~~-------  333 (392)
                      |+++.+.....      .......||+.|+| ||..      .+.|+|++|+++ +++.+..++.... ..+.       
T Consensus       206 g~a~~~~~~~~~~~~~~~~~~~~~gt~~y~a-PE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~  284 (352)
T 2jii_A          206 GFAFRYCPSGKHVAYVEGSRSPHEGDLEFIS-MDLHKGCGPSRRSDLQSLGYCMLKWLYGFLPWTNCLPNTEDIMKQKQK  284 (352)
T ss_dssp             GGCBCSSGGGCCCCCCTTSSCTTCSCTTTCC-HHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTCHHHHHHHHHH
T ss_pred             cceeeccCCCccccccccccccccCCccccC-HHHHccCCCCchhhHHHHHHHHHHHHhCCCCcccCCcCHHHHHHHHHh
Confidence            99987642111      11123478999999 7765      478999999877 5555544433221 1111       


Q ss_pred             ------------------HHHHHHHHHhhcccCcCCCCCHHHHHHHHccCC
Q 045577          334 ------------------LVKCIEVGLLCVQQRIEDWPTMSSVLTMLSNES  366 (392)
Q Consensus       334 ------------------~~~~~~i~~~Cl~~dp~~RPsm~eVv~~L~~~~  366 (392)
                                        ...+.+++..|++.||++||++.+|++.|+...
T Consensus       285 ~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~  335 (352)
T 2jii_A          285 FVDKPGPFVGPCGHWIRPSETLQKYLKVVMALTYEEKPPYAMLRNNLEALL  335 (352)
T ss_dssp             HHHSCCCEECTTSCEECCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHH
T ss_pred             ccCChhhhhhhccccCCCcHHHHHHHHHHHhCChhhCCCHHHHHHHHHHHH
Confidence                              245667888999999999999999999998763

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*

Probab=99.83  E-value=9.5e-22  Score=185.86  Aligned_cols=177  Identities=19%  Similarity=0.255  Sum_probs=120.0

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhh---hccccchhhhhHHHHHHHhhhhcCcCCCCceeeccccccee
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEF---ECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNV  261 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~---~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NI  261 (392)
                      |++.++.......++..+++|||++++++.......   ........+..++.|++.||.|||+.   +++||||||+||
T Consensus        91 h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dl~p~NI  167 (310)
T 2wqm_A           91 HPNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSR---RVMHRDIKPANV  167 (310)
T ss_dssp             CTTBCCEEEEEEETTEEEEEEECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGE
T ss_pred             CCCEeeEEEEEEcCCcEEEEEecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCcHHHE
Confidence            455555444433456789999999999987754331   22234555789999999999999998   899999999999


Q ss_pred             EEcCCCCCeEeeeeceEEeCCCCcceeceeeecccccCchhHH------HHHHHhcCCCcc-eeecccccCCCCC-C---
Q 045577          262 LLDAEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIIDEQTKMKGPF-S---  330 (392)
Q Consensus       262 ll~~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld~~~~~~~~~-~---  330 (392)
                      +++.++.+||+|||+++...... .......|++.|+| ||..      .+.|+|++|+++ +++.+...+.+.. .   
T Consensus       168 l~~~~~~~kl~Dfg~~~~~~~~~-~~~~~~~~~~~y~a-PE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~  245 (310)
T 2wqm_A          168 FITATGVVKLGDLGLGRFFSSKT-TAAHSLVGTPYYMS-PERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYS  245 (310)
T ss_dssp             EECTTSCEEECCC-------------------CCSSCC-HHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC---CCHHH
T ss_pred             EEcCCCCEEEEeccceeeecCCC-ccccccCCCeeEeC-hHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchhHHH
Confidence            99999999999999998754222 12233578999999 7754      478999999876 4554433332111 0   


Q ss_pred             ---------------HHHHHHHHHHHHhhcccCcCCCCCHHHHHHHHccCC
Q 045577          331 ---------------ADELVKCIEVGLLCVQQRIEDWPTMSSVLTMLSNES  366 (392)
Q Consensus       331 ---------------~~~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~L~~~~  366 (392)
                                     ......+.+++..|++.||++||++.+|++.|+...
T Consensus       246 ~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~il~~l~~l~  296 (310)
T 2wqm_A          246 LCKKIEQCDYPPLPSDHYSEELRQLVNMCINPDPEKRPDVTYVYDVAKRMH  296 (310)
T ss_dssp             HHHHHHTTCSCCCCTTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             HHHHhhcccCCCCcccccCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHH
Confidence                           111235667888999999999999999999998763

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}

Probab=99.83  E-value=3.9e-21  Score=179.77  Aligned_cols=170  Identities=18%  Similarity=0.285  Sum_probs=119.4

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhh---hccccchhhhhHHHHHHHhhhhcCcCCCCceeeccccccee
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEF---ECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNV  261 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~---~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NI  261 (392)
                      |++.++........+..|++|||++++++.......   ........+..++.|++.||.|||+.   +|+||||||+||
T Consensus        79 hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~dikp~NI  155 (285)
T 3is5_A           79 HPNIIKIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQ---HVVHKDLKPENI  155 (285)
T ss_dssp             CTTBCCEEEEEECSSEEEEEECCCSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGE
T ss_pred             CchHHhHHHheecCCeEEEEEEeCCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHHhC---CEEECCCCHHHE
Confidence            444444444333456789999999999887644322   12335555889999999999999998   899999999999


Q ss_pred             EE---cCCCCCeEeeeeceEEeCCCCcceeceeeecccccCchhHH-----HHHHHhcCCCcc-eeecccccCCCCCCHH
Q 045577          262 LL---DAEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELL-----QAWKLWSEGDPM-EIIDEQTKMKGPFSAD  332 (392)
Q Consensus       262 ll---~~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~-----~~~diws~G~v~-~~ld~~~~~~~~~~~~  332 (392)
                      ++   +.++.+||+|||+++.....  .......||+.|+| ||..     .+.|+|+.|+++ +++.+..++.+....+
T Consensus       156 l~~~~~~~~~~kl~Dfg~a~~~~~~--~~~~~~~~t~~y~a-PE~~~~~~~~~~Di~slG~il~~ll~g~~pf~~~~~~~  232 (285)
T 3is5_A          156 LFQDTSPHSPIKIIDFGLAELFKSD--EHSTNAAGTALYMA-PEVFKRDVTFKCDIWSAGVVMYFLLTGCLPFTGTSLEE  232 (285)
T ss_dssp             EESSSSTTCCEEECCCCCCCC------------CTTGGGCC-HHHHTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHH
T ss_pred             EEecCCCCCCEEEEeeecceecCCc--ccCcCcccccCcCC-hHHhccCCCcccCeehHHHHHHHHHhCCCCCCCCCHHH
Confidence            99   45578999999999765422  12234578999999 7764     478999999976 5555543333221111


Q ss_pred             ------------------HHHHHHHHHHhhcccCcCCCCCHHHHHH
Q 045577          333 ------------------ELVKCIEVGLLCVQQRIEDWPTMSSVLT  360 (392)
Q Consensus       333 ------------------~~~~~~~i~~~Cl~~dp~~RPsm~eVv~  360 (392)
                                        ....+.+++..|++.||++||++.|+++
T Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~  278 (285)
T 3is5_A          233 VQQKATYKEPNYAVECRPLTPQAVDLLKQMLTKDPERRPSAAQVLH  278 (285)
T ss_dssp             HHHHHHHCCCCCCC--CCCCHHHHHHHHHHTCSCTTTSCCHHHHHT
T ss_pred             HHhhhccCCcccccccCcCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence                              1234567888999999999999999875

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...

Probab=99.83  E-value=2.3e-21  Score=180.42  Aligned_cols=169  Identities=18%  Similarity=0.200  Sum_probs=122.7

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEc
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLD  264 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~  264 (392)
                      |++.++........+..+++|||++++++.....+.. ......+..++.|++.||.|||+.   +|+||||||+||+++
T Consensus        68 h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~l~~~~-~~~~~~~~~~~~qi~~~l~~LH~~---~i~H~dlkp~Nili~  143 (279)
T 3fdn_A           68 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS-KFDEQRTATYITELANALSYCHSK---RVIHRDIKPENLLLG  143 (279)
T ss_dssp             CTTBCCEEEEEECSSEEEEEECCCTTEEHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHTT---TCEECCCCGGGEEEC
T ss_pred             CCCCcchhheEecCCEEEEEEecCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhC---CEecccCChHhEEEc
Confidence            5555555544444567899999999988876544332 234455788999999999999998   899999999999999


Q ss_pred             CCCCCeEeeeeceEEeCCCCcceeceeeecccccCchhHH------HHHHHhcCCCcc-eeecccccCCCCCCHHH----
Q 045577          265 AEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIIDEQTKMKGPFSADE----  333 (392)
Q Consensus       265 ~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld~~~~~~~~~~~~~----  333 (392)
                      .++.+||+|||++.....   .......|++.|+| ||..      ...|+|+.|+++ +++.+..++......+.    
T Consensus       144 ~~~~~~l~Dfg~~~~~~~---~~~~~~~~~~~y~a-PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~  219 (279)
T 3fdn_A          144 SAGELKIADFGWSVHAPS---SRRTDLCGTLDYLP-PEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI  219 (279)
T ss_dssp             TTSCEEECSCCEESCC-----------CCCCTTCC-HHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHH
T ss_pred             CCCCEEEEeccccccCCc---ccccccCCCCCccC-HhHhccCCCCccchhHhHHHHHHHHHHCCCCCCCCcHHHHHHHH
Confidence            999999999998854332   12233578999999 7765      368999999876 55555444333221111    


Q ss_pred             -----------HHHHHHHHHhhcccCcCCCCCHHHHHHH
Q 045577          334 -----------LVKCIEVGLLCVQQRIEDWPTMSSVLTM  361 (392)
Q Consensus       334 -----------~~~~~~i~~~Cl~~dp~~RPsm~eVv~~  361 (392)
                                 ...+.+++..|++.+|++||++.++++.
T Consensus       220 ~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~h  258 (279)
T 3fdn_A          220 SRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLEH  258 (279)
T ss_dssp             HHTCCCCCTTSCHHHHHHHHHHCCSSGGGSCCHHHHHHC
T ss_pred             HhCCCCCCCcCCHHHHHHHHHHhccChhhCCCHHHHhhC
Confidence                       1245678889999999999999999964

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}

Probab=99.83  E-value=1.2e-21  Score=182.03  Aligned_cols=171  Identities=20%  Similarity=0.218  Sum_probs=112.8

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEc
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLD  264 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~  264 (392)
                      |++.++........+..|++|||++++++...............+..++.|++.||.|||+.   +++||||||+||+++
T Consensus        70 h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nili~  146 (278)
T 3cok_A           70 HPSILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLHSH---GILHRDLTLSNLLLT  146 (278)
T ss_dssp             CTTBCCEEEEEECSSEEEEEEECCTTEEHHHHHHTCSSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSSCCGGGEEEC
T ss_pred             CCCeEeEEEEEccCCeEEEEEecCCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEc
Confidence            45555554444445678999999999888776554333345556889999999999999998   899999999999999


Q ss_pred             CCCCCeEeeeeceEEeCCCCcceeceeeecccccCchhHH------HHHHHhcCCCcc-eeecccccCCCC---------
Q 045577          265 AEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIIDEQTKMKGP---------  328 (392)
Q Consensus       265 ~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld~~~~~~~~---------  328 (392)
                      .++.+||+|||++........ ......|++.|+| ||..      .+.|+|+.|+++ +++.+..++...         
T Consensus       147 ~~~~~kl~dfg~~~~~~~~~~-~~~~~~~~~~y~a-PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~  224 (278)
T 3cok_A          147 RNMNIKIADFGLATQLKMPHE-KHYTLCGTPNYIS-PEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKV  224 (278)
T ss_dssp             TTCCEEECCCTTCEECC------------------------------CTHHHHHHHHHHHHHHSSCSSCCCSCC-----C
T ss_pred             CCCCEEEEeecceeeccCCCC-cceeccCCCCcCC-cchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCChhHHHHHHHH
Confidence            999999999999987652221 1223578999999 6654      256999999876 444443332211         


Q ss_pred             ------CCHHHHHHHHHHHHhhcccCcCCCCCHHHHHH
Q 045577          329 ------FSADELVKCIEVGLLCVQQRIEDWPTMSSVLT  360 (392)
Q Consensus       329 ------~~~~~~~~~~~i~~~Cl~~dp~~RPsm~eVv~  360 (392)
                            .+......+.+++..|++.||++||++.++++
T Consensus       225 ~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~  262 (278)
T 3cok_A          225 VLADYEMPSFLSIEAKDLIHQLLRRNPADRLSLSSVLD  262 (278)
T ss_dssp             CSSCCCCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred             hhcccCCccccCHHHHHHHHHHcccCHhhCCCHHHHhc
Confidence                  11112235667888999999999999999876

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*

Probab=99.83  E-value=1.8e-21  Score=185.51  Aligned_cols=177  Identities=22%  Similarity=0.200  Sum_probs=127.1

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhh------ccccchhhhhHHHHHHHhhhhcCcCCCCceeeccccc
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFE------CSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKT  258 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~------~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp  258 (392)
                      |++.++........+..|++|||++++++........      .......++.++.|++.||.|||+.   +|+||||||
T Consensus        92 h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~---~i~H~dlkp  168 (327)
T 2yfx_A           92 HQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAA  168 (327)
T ss_dssp             CTTBCCEEEEECSSSSCEEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCG
T ss_pred             CCCCCeEEEEEcCCCCcEEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhhC---CeecCcCCH
Confidence            6666666555545567899999999999887554432      1124445788999999999999998   899999999


Q ss_pred             ceeEEcC---CCCCeEeeeeceEEeCCCC-cceeceeeecccccCchhHH------HHHHHhcCCCcc-eeec-ccccCC
Q 045577          259 SNVLLDA---EINPNISDFGPARIFGDQT-EEVTGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIID-EQTKMK  326 (392)
Q Consensus       259 ~NIll~~---~~~~kl~DFGla~~~~~~~-~~~~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld-~~~~~~  326 (392)
                      +||+++.   +..+||+|||+++...... ........|++.|+| ||..      .+.|+|++|+++ +++. +...+.
T Consensus       169 ~NIli~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~a-PE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~  247 (327)
T 2yfx_A          169 RNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMP-PEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYP  247 (327)
T ss_dssp             GGEEESCSSTTCCEEECCCHHHHHHHC------CCGGGSCGGGCC-HHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSST
T ss_pred             hHEEEecCCCcceEEECccccccccccccccccCCCcCCCcceeC-HhHhcCCCCCchhhHHHHHHHHHHHHcCCCCCCC
Confidence            9999984   4469999999987543111 112223457889999 7765      478999999977 4554 433332


Q ss_pred             CCCCHH----------------HHHHHHHHHHhhcccCcCCCCCHHHHHHHHccC
Q 045577          327 GPFSAD----------------ELVKCIEVGLLCVQQRIEDWPTMSSVLTMLSNE  365 (392)
Q Consensus       327 ~~~~~~----------------~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~L~~~  365 (392)
                      .....+                ....+.+++..|++.||.+||++.++++.|+..
T Consensus       248 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~~  302 (327)
T 2yfx_A          248 SKSNQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYC  302 (327)
T ss_dssp             TCCHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             CcCHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHH
Confidence            221111                122456788899999999999999999999764

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*

Probab=99.83  E-value=1.5e-21  Score=188.34  Aligned_cols=167  Identities=20%  Similarity=0.234  Sum_probs=122.0

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEc
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLD  264 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~  264 (392)
                      |++.++.......++..|+||||+.+ ++...............+..++.|+++||.|||+.   +|+||||||+||+++
T Consensus       113 hpniv~~~~~~~~~~~~~lv~e~~~g-~l~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~  188 (348)
T 1u5q_A          113 HPNTIQYRGCYLREHTAWLVMEYCLG-SASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSH---NMIHRDVKAGNILLS  188 (348)
T ss_dssp             CTTBCCEEEEEEETTEEEEEEECCSE-EHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEEE
T ss_pred             CCCEeeEEEEEEECCeEEEEEecCCC-CHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEEC
Confidence            55666555544445678999999984 44433322222334555788999999999999998   899999999999999


Q ss_pred             CCCCCeEeeeeceEEeCCCCcceeceeeecccccCchhHHH---------HHHHhcCCCcc-eeecccccCCCCCCHH--
Q 045577          265 AEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELLQ---------AWKLWSEGDPM-EIIDEQTKMKGPFSAD--  332 (392)
Q Consensus       265 ~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~~---------~~diws~G~v~-~~ld~~~~~~~~~~~~--  332 (392)
                      .++.+||+|||+++....     .....||+.|+| ||+..         +.|+|+.|+++ +++.+.+++.+....+  
T Consensus       189 ~~~~~kL~DfG~a~~~~~-----~~~~~gt~~y~a-PE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~~  262 (348)
T 1u5q_A          189 EPGLVKLGDFGSASIMAP-----ANSFVGTPYWMA-PEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSAL  262 (348)
T ss_dssp             TTTEEEECCCTTCBSSSS-----BCCCCSCGGGCC-HHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHH
T ss_pred             CCCCEEEeeccCceecCC-----CCcccCCcceeC-HhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHH
Confidence            999999999999976432     123578999999 77652         68999999876 5555544433221111  


Q ss_pred             ---------------HHHHHHHHHHhhcccCcCCCCCHHHHHHH
Q 045577          333 ---------------ELVKCIEVGLLCVQQRIEDWPTMSSVLTM  361 (392)
Q Consensus       333 ---------------~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~  361 (392)
                                     ....+.+++..|++.+|++||++.++++.
T Consensus       263 ~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~h  306 (348)
T 1u5q_A          263 YHIAQNESPALQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKH  306 (348)
T ss_dssp             HHHHHSCCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHTTC
T ss_pred             HHHHhcCCCCCCCCCCCHHHHHHHHHHcccChhhCcCHHHHhhC
Confidence                           12245577789999999999999998864

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*

Probab=99.83  E-value=3.2e-21  Score=184.71  Aligned_cols=171  Identities=20%  Similarity=0.195  Sum_probs=127.6

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEc
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLD  264 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~  264 (392)
                      |++.++.......++..|++|||++++++........ ......+..++.|++.||.|||++   +|+||||||+||+++
T Consensus       100 h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~-~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~  175 (335)
T 2owb_A          100 HQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRK-ALTEPEARYYLRQIVLGCQYLHRN---RVIHRDLKLGNLFLN  175 (335)
T ss_dssp             CTTBCCEEEEEECSSEEEEEECCCTTCBHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEEC
T ss_pred             CCCCCeEEEEEecCCeEEEEEecCCCCCHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHHHC---CCEecCCCchhEEEc
Confidence            5666665555444567899999999988876544332 234555889999999999999998   899999999999999


Q ss_pred             CCCCCeEeeeeceEEeCCCCcceeceeeecccccCchhHHH------HHHHhcCCCcc-eeecccccCCCCCCHH-----
Q 045577          265 AEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELLQ------AWKLWSEGDPM-EIIDEQTKMKGPFSAD-----  332 (392)
Q Consensus       265 ~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~~------~~diws~G~v~-~~ld~~~~~~~~~~~~-----  332 (392)
                      .++.+||+|||+++...... .......|++.|+| ||...      ..|+|++|+++ +++.+...+......+     
T Consensus       176 ~~~~~kl~Dfg~~~~~~~~~-~~~~~~~gt~~y~a-PE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~  253 (335)
T 2owb_A          176 EDLEVKIGDFGLATKVEYDG-ERKKVLCGTPNYIA-PEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRI  253 (335)
T ss_dssp             TTCCEEECCCTTCEECCSTT-CCBCCCCSCCSSCC-HHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHH
T ss_pred             CCCCEEEeeccCceecccCc-ccccccCCCccccC-HHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCCCCHHHHHHHH
Confidence            99999999999998865222 12233578999999 77653      78999999876 5555543333221111     


Q ss_pred             ----------HHHHHHHHHHhhcccCcCCCCCHHHHHHH
Q 045577          333 ----------ELVKCIEVGLLCVQQRIEDWPTMSSVLTM  361 (392)
Q Consensus       333 ----------~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~  361 (392)
                                ....+.+++..|++.||++||++.++++.
T Consensus       254 ~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~~  292 (335)
T 2owb_A          254 KKNEYSIPKHINPVAASLIQKMLQTDPTARPTINELLND  292 (335)
T ss_dssp             HHTCCCCCTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred             hcCCCCCCccCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence                      11245678889999999999999999863

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*

Probab=99.83  E-value=2.6e-21  Score=188.69  Aligned_cols=156  Identities=20%  Similarity=0.184  Sum_probs=115.9

Q ss_pred             CCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEcCCC----------
Q 045577          198 DGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEI----------  267 (392)
Q Consensus       198 ~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~~~~----------  267 (392)
                      +...|+||||+.++.+...............+..++.|++.||.|||+++  +|+||||||+|||++.++          
T Consensus       117 ~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~--givHrDikp~NIll~~~~~~~~~~~~~~  194 (397)
T 1wak_A          117 GTHICMVFEVLGHHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLHTKC--RIIHTDIKPENILLSVNEQYIRRLAAEA  194 (397)
T ss_dssp             EEEEEEEECCCCCBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTT--CEECCCCSGGGEEECCCHHHHHHHHHHH
T ss_pred             CceEEEEEeccCccHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHhC--CEecCCCCHHHeeEeccchhhhhhhhhh
Confidence            34689999999654443333222223455568899999999999999864  699999999999998765          


Q ss_pred             ---------------------------------------CCeEeeeeceEEeCCCCcceeceeeecccccCchhHH----
Q 045577          268 ---------------------------------------NPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELL----  304 (392)
Q Consensus       268 ---------------------------------------~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~----  304 (392)
                                                             .+||+|||+++.....    .....||+.|+| ||+.    
T Consensus       195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~----~~~~~gt~~y~a-PE~~~~~~  269 (397)
T 1wak_A          195 TEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKH----FTEDIQTRQYRS-LEVLIGSG  269 (397)
T ss_dssp             C---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBC----SCSCCSCGGGCC-HHHHHTSC
T ss_pred             HHHhhcCCCCCCCCccccCCcccccccccccccccccccceEecccccccccccc----CccCCCCCcccC-ChhhcCCC
Confidence                                                   7999999999876422    223578999999 7765    


Q ss_pred             --HHHHHhcCCCcc-eeecccccCCCCC----------------------------------------------------
Q 045577          305 --QAWKLWSEGDPM-EIIDEQTKMKGPF----------------------------------------------------  329 (392)
Q Consensus       305 --~~~diws~G~v~-~~ld~~~~~~~~~----------------------------------------------------  329 (392)
                        .+.|+|++|+++ +++.+...+.+..                                                    
T Consensus       270 ~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  349 (397)
T 1wak_A          270 YNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDLKHITKLKPWG  349 (397)
T ss_dssp             CCTHHHHHHHHHHHHHHHHSSCSCCCCCCSSSCHHHHHHHHHHHHHCSCCHHHHHHCTTGGGTBCTTSSBSSCCCCCCCC
T ss_pred             CCcHHHHHHHHHHHHHHhhCCCCCCCCcccccCchHHHHHHHHHhcCCCChHHhhcccccccccCCccccccccccCCcc
Confidence              378999999987 5565544443211                                                    


Q ss_pred             -----------CHHHHHHHHHHHHhhcccCcCCCCCHHHHHH
Q 045577          330 -----------SADELVKCIEVGLLCVQQRIEDWPTMSSVLT  360 (392)
Q Consensus       330 -----------~~~~~~~~~~i~~~Cl~~dp~~RPsm~eVv~  360 (392)
                                 +.+....+.+++.+|++.||++|||+.++++
T Consensus       350 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~  391 (397)
T 1wak_A          350 LFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLR  391 (397)
T ss_dssp             HHHHHHHTSCCCHHHHHHHHHHHGGGGCSSGGGSCCHHHHHT
T ss_pred             hhHhhhhhcccchhhHHHHHHHHHHHhccChhhcCCHHHHhh
Confidence                       2233445678999999999999999999985

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}

Probab=99.83  E-value=1.3e-21  Score=185.28  Aligned_cols=177  Identities=18%  Similarity=0.134  Sum_probs=127.8

Q ss_pred             CCCccccccCcC----CCCCeeEEecCccCCCcChhhhhh---hccccchhhhhHHHHHHHhhhhcCcCCCCceeecccc
Q 045577          185 SGGCKRNWEADC----GDGEVFLMFEGIKLPDKSEFTCEF---ECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHK  257 (392)
Q Consensus       185 s~GCvR~~~l~C----~~~~~~lv~e~~~~~~l~~~~~~~---~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlK  257 (392)
                      |++.++......    .....|++|||++++++.....+.   ........+..++.|++.||.|||+.   +|+|||||
T Consensus        85 h~~iv~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~dlk  161 (317)
T 2buj_A           85 HPNILRLVAYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAK---GYAHRDLK  161 (317)
T ss_dssp             CTTBCCCCEEEEEEETTEEEEEEEEECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCC
T ss_pred             CCCeeeEEEEEEeccCCCceeEEEEEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCC
Confidence            666666554432    124679999999999987754432   22235556889999999999999998   89999999


Q ss_pred             cceeEEcCCCCCeEeeeeceEEeCCCCcc--------eeceeeecccccCchhHH---------HHHHHhcCCCcc-eee
Q 045577          258 TSNVLLDAEINPNISDFGPARIFGDQTEE--------VTGRVIGTQTLKTVPELL---------QAWKLWSEGDPM-EII  319 (392)
Q Consensus       258 p~NIll~~~~~~kl~DFGla~~~~~~~~~--------~~~~~~gt~~y~a~~~~~---------~~~diws~G~v~-~~l  319 (392)
                      |+||+++.++.+||+|||+++........        ......||+.|+| ||..         .+.|+|+.|+++ +++
T Consensus       162 p~NIl~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~a-PE~~~~~~~~~~~~~~Di~slG~il~el~  240 (317)
T 2buj_A          162 PTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRCTISYRA-PELFSVQSHCVIDERTDVWSLGCVLYAMM  240 (317)
T ss_dssp             GGGEEECTTSCEEECCCSSCEESCEEEESHHHHHHHHHHHHHHSCGGGCC-GGGSSCCSEEEECTHHHHHHHHHHHHHHH
T ss_pred             HHHEEEcCCCCEEEEecCcchhcccccccccccccccccccccCCcccCC-HhHhccCCCcCCCchhhHHHHHHHHHHHH
Confidence            99999999999999999998765311000        0112456899999 6643         488999999876 444


Q ss_pred             cccccCC------------------CCCCHHHHHHHHHHHHhhcccCcCCCCCHHHHHHHHccC
Q 045577          320 DEQTKMK------------------GPFSADELVKCIEVGLLCVQQRIEDWPTMSSVLTMLSNE  365 (392)
Q Consensus       320 d~~~~~~------------------~~~~~~~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~L~~~  365 (392)
                      .+..++.                  .+........+.+++..|++.||++||++.++++.|+..
T Consensus       241 ~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~~  304 (317)
T 2buj_A          241 FGEGPYDMVFQKGDSVALAVQNQLSIPQSPRHSSALWQLLNSMMTVDPHQRPHIPLLLSQLEAL  304 (317)
T ss_dssp             HSSCTTHHHHHTTSCHHHHHHCC--CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHT
T ss_pred             hCCCChhhhhcccchhhHHhhccCCCCccccCCHHHHHHHHHHhhcChhhCCCHHHHHHHhhhc
Confidence            4432221                  011111233567788899999999999999999999987

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*

Probab=99.83  E-value=3e-21  Score=184.29  Aligned_cols=171  Identities=20%  Similarity=0.225  Sum_probs=123.0

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhh-hccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEE
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEF-ECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLL  263 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~-~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll  263 (392)
                      +++.++........+..|++|||++++++....... ........+..++.|++.||.|||+.   +|+||||||+||++
T Consensus        88 ~~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~ql~~~L~~LH~~---givH~Dikp~NIl~  164 (327)
T 3lm5_A           88 CPRVINLHEVYENTSEIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQN---NIVHLDLKPQNILL  164 (327)
T ss_dssp             CTTBCCEEEEEECSSEEEEEEECCTTEEGGGGGSSCC-CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEE
T ss_pred             CCCEEEEEEEEEeCCeEEEEEEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHC---CeecCcCChHHEEE
Confidence            345554444443456789999999999887654332 12235556889999999999999998   89999999999999


Q ss_pred             cC---CCCCeEeeeeceEEeCCCCcceeceeeecccccCchhHH------HHHHHhcCCCcc-eeecccccCCCCCCHH-
Q 045577          264 DA---EINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIIDEQTKMKGPFSAD-  332 (392)
Q Consensus       264 ~~---~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld~~~~~~~~~~~~-  332 (392)
                      +.   ++.+||+|||+++......  ......||+.|+| ||+.      .+.|+|+.|+++ +++.+..++.+....+ 
T Consensus       165 ~~~~~~~~~kL~Dfg~a~~~~~~~--~~~~~~gt~~y~a-PE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~  241 (327)
T 3lm5_A          165 SSIYPLGDIKIVDFGMSRKIGHAC--ELREIMGTPEYLA-PEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQET  241 (327)
T ss_dssp             SCBTTBCCEEECCGGGCEEC-----------CCCGGGCC-HHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH
T ss_pred             ecCCCCCcEEEeeCccccccCCcc--ccccccCCcCccC-CeeecCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchHH
Confidence            87   7899999999998765222  2233579999999 7765      378999999876 5555544433222111 


Q ss_pred             ------------------HHHHHHHHHHhhcccCcCCCCCHHHHHHH
Q 045577          333 ------------------ELVKCIEVGLLCVQQRIEDWPTMSSVLTM  361 (392)
Q Consensus       333 ------------------~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~  361 (392)
                                        ....+.+++..|++.||++||++.++++.
T Consensus       242 ~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~ll~h  288 (327)
T 3lm5_A          242 YLNISQVNVDYSEETFSSVSQLATDFIQSLLVKNPEKRPTAEICLSH  288 (327)
T ss_dssp             HHHHHHTCCCCCTTTTTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTC
T ss_pred             HHHHHhcccccCchhhcccCHHHHHHHHHHcCCChhhCcCHHHHhCC
Confidence                              12346678889999999999999999864

>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*

Probab=99.82  E-value=3.6e-21  Score=184.69  Aligned_cols=155  Identities=19%  Similarity=0.267  Sum_probs=115.3

Q ss_pred             CCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEE--------------
Q 045577          198 DGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLL--------------  263 (392)
Q Consensus       198 ~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll--------------  263 (392)
                      .+..|++|||+.++.+...............+..++.|++.||.|||+.   +|+||||||+||++              
T Consensus        94 ~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~---~ivH~Dlkp~NIll~~~~~~~~~~~~~~  170 (355)
T 2eu9_A           94 HGHMCIAFELLGKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLHEN---QLTHTDLKPENILFVNSEFETLYNEHKS  170 (355)
T ss_dssp             TTEEEEEEECCCCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEESCCCEEEEECCC-C
T ss_pred             CCeEEEEEeccCCChHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEeccccccccccccc
Confidence            4678999999955444333222222345556889999999999999998   89999999999999              


Q ss_pred             -----cCCCCCeEeeeeceEEeCCCCcceeceeeecccccCchhHH------HHHHHhcCCCcc-eeecccccCCCCCCH
Q 045577          264 -----DAEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIIDEQTKMKGPFSA  331 (392)
Q Consensus       264 -----~~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld~~~~~~~~~~~  331 (392)
                           +.++.+||+|||+++.....    .....||+.|+| ||+.      .+.|+|+.|+++ +++.+...+......
T Consensus       171 ~~~~~~~~~~~kl~Dfg~~~~~~~~----~~~~~gt~~y~a-PE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~  245 (355)
T 2eu9_A          171 CEEKSVKNTSIRVADFGSATFDHEH----HTTIVATRHYRP-PEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENR  245 (355)
T ss_dssp             CCEEEESCCCEEECCCTTCEETTSC----CCSSCSCGGGCC-HHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH
T ss_pred             ccccccCCCcEEEeecCcccccccc----ccCCcCCCcccC-CeeeecCCCCCccchHHHHHHHHHHHhCCCCCCCCCHH
Confidence                 66789999999999875422    223578999999 7765      378999999877 566654444332211


Q ss_pred             H-----------------------------------------------------------HHHHHHHHHHhhcccCcCCC
Q 045577          332 D-----------------------------------------------------------ELVKCIEVGLLCVQQRIEDW  352 (392)
Q Consensus       332 ~-----------------------------------------------------------~~~~~~~i~~~Cl~~dp~~R  352 (392)
                      +                                                           ....+.+++..|++.||++|
T Consensus       246 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R  325 (355)
T 2eu9_A          246 EHLVMMEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEFDPAQR  325 (355)
T ss_dssp             HHHHHHHHHHCCCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTS
T ss_pred             HHHHHHHHHcCCCcHHHhhhccchhhhcccccccccccchhccccccCCcccccccccchhHHHHHHHHHHHhcCChhhC
Confidence            1                                                           12256688889999999999


Q ss_pred             CCHHHHHH
Q 045577          353 PTMSSVLT  360 (392)
Q Consensus       353 Psm~eVv~  360 (392)
                      ||+.++++
T Consensus       326 pt~~e~l~  333 (355)
T 2eu9_A          326 ITLAEALL  333 (355)
T ss_dssp             CCHHHHTT
T ss_pred             cCHHHHhc
Confidence            99999975

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A

Probab=99.82  E-value=2.3e-21  Score=191.67  Aligned_cols=168  Identities=20%  Similarity=0.243  Sum_probs=120.8

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEc
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLD  264 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~  264 (392)
                      |++.++.... +..++.|++|||++++++......... ..+..+..++.|++.||.|||+.   +|+||||||+|||++
T Consensus       199 hpniv~l~~~-~~~~~~~lv~e~~~~g~L~~~l~~~~~-~~~~~~~~i~~qi~~~l~~LH~~---~ivHrDlkp~NIll~  273 (419)
T 3i6u_A          199 HPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKR-LKEATCKLYFYQMLLAVQYLHEN---GIIHRDLKPENVLLS  273 (419)
T ss_dssp             CTTBCCCCEE-EESSEEEEEEECCTTCBGGGGTSSSCC-CCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEES
T ss_pred             CCCEeeEEEE-EecCceEEEEEcCCCCcHHHHHhccCC-CCHHHHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEe
Confidence            8888887665 445678999999999998765544332 34455788999999999999998   899999999999996


Q ss_pred             CC---CCCeEeeeeceEEeCCCCcceeceeeecccccCchhHH---------HHHHHhcCCCcc-eeecccccCCCCCC-
Q 045577          265 AE---INPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELL---------QAWKLWSEGDPM-EIIDEQTKMKGPFS-  330 (392)
Q Consensus       265 ~~---~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~---------~~~diws~G~v~-~~ld~~~~~~~~~~-  330 (392)
                      .+   ..+||+|||+++.....  .......||+.|+| ||+.         .+.|+|+.|+++ +++.+.+++..... 
T Consensus       274 ~~~~~~~~kl~DFG~a~~~~~~--~~~~~~~gt~~y~a-PE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~  350 (419)
T 3i6u_A          274 SQEEDCLIKITDFGHSKILGET--SLMRTLCGTPTYLA-PEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQ  350 (419)
T ss_dssp             SSSSSCCEEECCSSTTTSCC-------------CTTCC-TTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSSS
T ss_pred             cCCCcceEEEeecccceecCCC--ccccccCCCCCccC-ceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCcch
Confidence            54   45999999999765422  22334679999999 6642         478999999876 55555444432211 


Q ss_pred             ---------------HH----HHHHHHHHHHhhcccCcCCCCCHHHHHH
Q 045577          331 ---------------AD----ELVKCIEVGLLCVQQRIEDWPTMSSVLT  360 (392)
Q Consensus       331 ---------------~~----~~~~~~~i~~~Cl~~dp~~RPsm~eVv~  360 (392)
                                     .+    ....+.+++..|++.||++||++.++++
T Consensus       351 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~  399 (419)
T 3i6u_A          351 VSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALR  399 (419)
T ss_dssp             CCHHHHHHTTCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred             HHHHHHHhcCCCCCCchhhcccCHHHHHHHHHHccCChhHCcCHHHHhC
Confidence                           11    1235677888999999999999999886

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*

Probab=99.82  E-value=5e-21  Score=177.81  Aligned_cols=169  Identities=18%  Similarity=0.198  Sum_probs=126.0

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEE-
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLL-  263 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll-  263 (392)
                      |++.++.......++..|++|||++++++......... .....+..++.|++.||.|||+.   +++||||||+||++ 
T Consensus        65 h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~-~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~  140 (277)
T 3f3z_A           65 HPNIIRLYETFEDNTDIYLVMELCTGGELFERVVHKRV-FRESDAARIMKDVLSAVAYCHKL---NVAHRDLKPENFLFL  140 (277)
T ss_dssp             CTTBCCEEEEEECSSEEEEEEECCCSCBHHHHHHHHCS-CCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEES
T ss_pred             CCCEeeEEEEEecCCeEEEEEeccCCCcHHHHHHHcCC-CCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHEEEe
Confidence            55555555444445678999999999888765443322 34555889999999999999998   89999999999999 


Q ss_pred             --cCCCCCeEeeeeceEEeCCCCcceeceeeecccccCchhHH-----HHHHHhcCCCcc-eeecccccCCCCCCHH---
Q 045577          264 --DAEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELL-----QAWKLWSEGDPM-EIIDEQTKMKGPFSAD---  332 (392)
Q Consensus       264 --~~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~-----~~~diws~G~v~-~~ld~~~~~~~~~~~~---  332 (392)
                        +.++.+||+|||++.......  ......||+.|+| ||..     .+.|+|+.|+++ +++.+..++......+   
T Consensus       141 ~~~~~~~~~l~Dfg~~~~~~~~~--~~~~~~~t~~y~a-PE~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~  217 (277)
T 3f3z_A          141 TDSPDSPLKLIDFGLAARFKPGK--MMRTKVGTPYYVS-PQVLEGLYGPECDEWSAGVMMYVLLCGYPPFSAPTDSEVML  217 (277)
T ss_dssp             SSSTTCCEEECCCTTCEECCTTS--CBCCCCSCTTTCC-HHHHTTCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHH
T ss_pred             cCCCCCcEEEEecccceeccCcc--chhccCCCCCccC-hHHhcccCCchhhehhHHHHHHHHHHCCCCCCCCCHHHHHH
Confidence              788899999999998765322  2233578999999 7765     368999999876 5555544443322111   


Q ss_pred             ----------------HHHHHHHHHHhhcccCcCCCCCHHHHHH
Q 045577          333 ----------------ELVKCIEVGLLCVQQRIEDWPTMSSVLT  360 (392)
Q Consensus       333 ----------------~~~~~~~i~~~Cl~~dp~~RPsm~eVv~  360 (392)
                                      ....+.+++..|++.||++||++.++++
T Consensus       218 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~  261 (277)
T 3f3z_A          218 KIREGTFTFPEKDWLNVSPQAESLIRRLLTKSPKQRITSLQALE  261 (277)
T ss_dssp             HHHHCCCCCCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred             HHHhCCCCCCchhhhcCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence                            1235667888999999999999999875

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*

Probab=99.82  E-value=1.1e-21  Score=187.52  Aligned_cols=170  Identities=22%  Similarity=0.280  Sum_probs=120.7

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEc
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLD  264 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~  264 (392)
                      |++.++.......++..|++|||++++++........ ......+..++.|++.||.|||+.   +|+||||||+||+++
T Consensus        83 h~~iv~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~-~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~Nil~~  158 (331)
T 4aaa_A           83 HENLVNLLEVCKKKKRWYLVFEFVDHTILDDLELFPN-GLDYQVVQKYLFQIINGIGFCHSH---NIIHRDIKPENILVS  158 (331)
T ss_dssp             CTTBCCEEEEEEETTEEEEEEECCSEEHHHHHHHSTT-CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEC
T ss_pred             CCCEeeEEEEeecCCEEEEEEecCCcchHHHHHhhcc-CCCHHHHHHHHHHHHHHHHHHHHC---CEEccCcChheEEEc
Confidence            5555555444334567899999999887765433322 234455788999999999999998   899999999999999


Q ss_pred             CCCCCeEeeeeceEEeCCCCcceeceeeecccccCchhHH-------HHHHHhcCCCcc-eeecccccCCCCCCHHH---
Q 045577          265 AEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELL-------QAWKLWSEGDPM-EIIDEQTKMKGPFSADE---  333 (392)
Q Consensus       265 ~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~-------~~~diws~G~v~-~~ld~~~~~~~~~~~~~---  333 (392)
                      .++.+||+|||+++....... ......|++.|+| ||..       .+.|+|+.|+++ +++.+.+.+.+....+.   
T Consensus       159 ~~~~~kl~Dfg~~~~~~~~~~-~~~~~~~t~~y~a-PE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~  236 (331)
T 4aaa_A          159 QSGVVKLCDFGFARTLAAPGE-VYDDEVATRWYRA-PELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYH  236 (331)
T ss_dssp             TTSCEEECCCTTC-------------CCCCCTTCC-HHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHH
T ss_pred             CCCcEEEEeCCCceeecCCcc-ccCCCcCCccccC-cccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHH
Confidence            999999999999987642221 2233568999999 7754       367999999876 55665444433322211   


Q ss_pred             -------------------------------------------HHHHHHHHHhhcccCcCCCCCHHHHHH
Q 045577          334 -------------------------------------------LVKCIEVGLLCVQQRIEDWPTMSSVLT  360 (392)
Q Consensus       334 -------------------------------------------~~~~~~i~~~Cl~~dp~~RPsm~eVv~  360 (392)
                                                                 ...+.+++..|++.||++||++.|+++
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~  306 (331)
T 4aaa_A          237 IMMCLGNLIPRHQELFNKNPVFAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLH  306 (331)
T ss_dssp             HHHHHCSCCHHHHHHHHHCGGGTTCCCCCCSSCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCGGGGGG
T ss_pred             HHHHhCCCChhhhhHhhhccccccccCccccccchhhhcccchhHHHHHHHHHHhccCcccCCCHHHHhc
Confidence                                                       234667888999999999999998875

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*

Probab=99.82  E-value=6e-21  Score=177.49  Aligned_cols=173  Identities=16%  Similarity=0.156  Sum_probs=120.5

Q ss_pred             CCCccccccCcCC-CCCeeEEecCccCCCcChhhhhhhc-cccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeE
Q 045577          185 SGGCKRNWEADCG-DGEVFLMFEGIKLPDKSEFTCEFEC-SKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVL  262 (392)
Q Consensus       185 s~GCvR~~~l~C~-~~~~~lv~e~~~~~~l~~~~~~~~~-~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIl  262 (392)
                      |++.++....... ++..|++|||++++++.....+... ......+..++.|++.||.|||+.   +++||||||+||+
T Consensus        73 h~~iv~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil  149 (278)
T 1byg_A           73 HSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRDLAARNVL  149 (278)
T ss_dssp             CTTBCCEEEEECCC--CCEEEECCCTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEE
T ss_pred             CCCEeeEEEEEEcCCCceEEEEecCCCCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHhC---CccccCCCcceEE
Confidence            4555555443222 3468999999999888775543322 234455788999999999999998   8999999999999


Q ss_pred             EcCCCCCeEeeeeceEEeCCCCcceeceeeecccccCchhHH------HHHHHhcCCCcc-eeec-ccccCCCCC-----
Q 045577          263 LDAEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIID-EQTKMKGPF-----  329 (392)
Q Consensus       263 l~~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld-~~~~~~~~~-----  329 (392)
                      ++.++.+||+|||+++.....    .....++..|+| ||..      .+.|+|+.|+++ +++. +..++....     
T Consensus       150 ~~~~~~~~l~Dfg~~~~~~~~----~~~~~~~~~y~a-PE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~  224 (278)
T 1byg_A          150 VSEDNVAKVSDFGLTKEASST----QDTGKLPVKWTA-PEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVV  224 (278)
T ss_dssp             ECTTSCEEECCCCC----------------CCTTTSC-HHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGGGHH
T ss_pred             EeCCCcEEEeecccccccccc----ccCCCccccccC-HHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCCCHHHHH
Confidence            999999999999998765321    122457888999 7765      378999999877 4554 433322211     


Q ss_pred             -----------CHHHHHHHHHHHHhhcccCcCCCCCHHHHHHHHccC
Q 045577          330 -----------SADELVKCIEVGLLCVQQRIEDWPTMSSVLTMLSNE  365 (392)
Q Consensus       330 -----------~~~~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~L~~~  365 (392)
                                 +......+.+++..|++.||++||++.++++.|+..
T Consensus       225 ~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~i  271 (278)
T 1byg_A          225 PRVEKGYKMDAPDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLEHI  271 (278)
T ss_dssp             HHHTTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             HHHhcCCCCCCcccCCHHHHHHHHHHhcCChhhCCCHHHHHHHHHHH
Confidence                       111223566788899999999999999999999864

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}

Probab=99.82  E-value=8.9e-21  Score=178.49  Aligned_cols=173  Identities=13%  Similarity=0.113  Sum_probs=122.5

Q ss_pred             CCCccccccCc--CCCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeE
Q 045577          185 SGGCKRNWEAD--CGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVL  262 (392)
Q Consensus       185 s~GCvR~~~l~--C~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIl  262 (392)
                      |++.++.....  ...+..|++|||++++.................+..++.|++.||.|||++   +++||||||+||+
T Consensus        65 h~~i~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~---~i~H~dlkp~NIl  141 (305)
T 2wtk_C           65 HKNVIQLVDVLYNEEKQKMYMVMEYCVCGMQEMLDSVPEKRFPVCQAHGYFCQLIDGLEYLHSQ---GIVHKDIKPGNLL  141 (305)
T ss_dssp             CTTBCCEEEEEECC---CEEEEEECCSEEHHHHHHHSTTCSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEE
T ss_pred             CCCeeEEEEEEEcCCCCeEEEEehhccCCHHHHHHhCcccccCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCcccEE
Confidence            55555554443  223568999999997732222221122234555788999999999999998   8999999999999


Q ss_pred             EcCCCCCeEeeeeceEEeCCC-CcceeceeeecccccCchhHH--------HHHHHhcCCCcc-eeecccccCCCCCCHH
Q 045577          263 LDAEINPNISDFGPARIFGDQ-TEEVTGRVIGTQTLKTVPELL--------QAWKLWSEGDPM-EIIDEQTKMKGPFSAD  332 (392)
Q Consensus       263 l~~~~~~kl~DFGla~~~~~~-~~~~~~~~~gt~~y~a~~~~~--------~~~diws~G~v~-~~ld~~~~~~~~~~~~  332 (392)
                      ++.++.+||+|||++...... .........|++.|+| ||+.        .+.|+|+.|+++ +++.+...+.+....+
T Consensus       142 ~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~a-PE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~  220 (305)
T 2wtk_C          142 LTTGGTLKISALGVAEALHPFAADDTCRTSQGSPAFQP-PEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNIYK  220 (305)
T ss_dssp             ECTTCCEEECCCTTCEECCTTCSSCEECCCCSCGGGCC-HHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCSSHHH
T ss_pred             EcCCCcEEeeccccccccCccccccccccCCCCCCCcC-hhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCchHHH
Confidence            999999999999999886522 2223334578999999 7754        478999999876 5555544433321111


Q ss_pred             ---------------HHHHHHHHHHhhcccCcCCCCCHHHHHHH
Q 045577          333 ---------------ELVKCIEVGLLCVQQRIEDWPTMSSVLTM  361 (392)
Q Consensus       333 ---------------~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~  361 (392)
                                     ....+.+++..|++.||++||++.++++.
T Consensus       221 ~~~~i~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~  264 (305)
T 2wtk_C          221 LFENIGKGSYAIPGDCGPPLSDLLKGMLEYEPAKRFSIRQIRQH  264 (305)
T ss_dssp             HHHHHHHCCCCCCSSSCHHHHHHHHHHTCSSTTTSCCHHHHHHS
T ss_pred             HHHHHhcCCCCCCCccCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence                           12245678889999999999999999964

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}

Probab=99.82  E-value=4.3e-21  Score=183.93  Aligned_cols=173  Identities=19%  Similarity=0.206  Sum_probs=121.7

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhh---------------------------------------hcccc
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEF---------------------------------------ECSKY  225 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~---------------------------------------~~~~~  225 (392)
                      |++.++........+..++||||++++++.......                                       .....
T Consensus        87 hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  166 (345)
T 3hko_A           87 HPNIARLYEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQR  166 (345)
T ss_dssp             CTTBCCEEEEEECSSEEEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHH
T ss_pred             CCCcceeehhhccCCeEEEEEeCCCCCcHHHHHHHhhccccccccccccccccccccccccccccccccccccccccccc
Confidence            556665555544456789999999999886633210                                       00002


Q ss_pred             chhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEcCCC--CCeEeeeeceEEeCCC---CcceeceeeecccccCc
Q 045577          226 SSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEI--NPNISDFGPARIFGDQ---TEEVTGRVIGTQTLKTV  300 (392)
Q Consensus       226 ~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~~~~--~~kl~DFGla~~~~~~---~~~~~~~~~gt~~y~a~  300 (392)
                      ...+..++.|++.||.|||+.   +|+||||||+||+++.++  .+||+|||+++.+...   .........||+.|+| 
T Consensus       167 ~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~a-  242 (345)
T 3hko_A          167 EKLISNIMRQIFSALHYLHNQ---GICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVA-  242 (345)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCC-
T ss_pred             HHHHHHHHHHHHHHHHHHHHC---CccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccC-
Confidence            333677999999999999998   899999999999998766  8999999999876421   1112334679999999 


Q ss_pred             hhHH--------HHHHHhcCCCcc-eeecccccCCCCCCHH-------------------HHHHHHHHHHhhcccCcCCC
Q 045577          301 PELL--------QAWKLWSEGDPM-EIIDEQTKMKGPFSAD-------------------ELVKCIEVGLLCVQQRIEDW  352 (392)
Q Consensus       301 ~~~~--------~~~diws~G~v~-~~ld~~~~~~~~~~~~-------------------~~~~~~~i~~~Cl~~dp~~R  352 (392)
                      ||..        .+.|+|++|+++ +++.+..++.+....+                   ....+.+++..|++.+|++|
T Consensus       243 PE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R  322 (345)
T 3hko_A          243 PEVLNTTNESYGPKCDAWSAGVLLHLLLMGAVPFPGVNDADTISQVLNKKLCFENPNYNVLSPLARDLLSNLLNRNVDER  322 (345)
T ss_dssp             HHHHTCSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCTTSGGGGGSCHHHHHHHHHHSCSCTTTS
T ss_pred             chhhccCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCChHHHHHHHHhcccccCCcccccCCHHHHHHHHHHcCCChhHC
Confidence            7765        378999999876 5555544443322111                   12356678889999999999


Q ss_pred             CCHHHHHHH
Q 045577          353 PTMSSVLTM  361 (392)
Q Consensus       353 Psm~eVv~~  361 (392)
                      |++.++++.
T Consensus       323 ps~~~~l~h  331 (345)
T 3hko_A          323 FDAMRALQH  331 (345)
T ss_dssp             CCHHHHHHS
T ss_pred             CCHHHHhcC
Confidence            999999873

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*

Probab=99.82  E-value=6.1e-21  Score=192.53  Aligned_cols=169  Identities=18%  Similarity=0.207  Sum_probs=126.7

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEc
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLD  264 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~  264 (392)
                      |++.++........+..|+||||++++++.....+... .....+..++.|++.||.|||+.   +|+||||||+||+++
T Consensus        95 hpniv~~~~~~~~~~~~~lv~e~~~~g~L~~~~~~~~~-~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~  170 (494)
T 3lij_A           95 HPNIMKLYDFFEDKRNYYLVMECYKGGELFDEIIHRMK-FNEVDAAVIIKQVLSGVTYLHKH---NIVHRDLKPENLLLE  170 (494)
T ss_dssp             CTTBCCEEEEEECSSEEEEEEECCCSCBHHHHHHHHSS-CCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEES
T ss_pred             CCCCCeEEEEEEeCCEEEEEEecCCCCcHHHHHHHcCC-CCHHHHHHHHHHHHHHHHHHHHC---CceeccCChhhEEEe
Confidence            66666666655555778999999999998765544332 34445788999999999999998   899999999999997


Q ss_pred             CC---CCCeEeeeeceEEeCCCCcceeceeeecccccCchhHH-----HHHHHhcCCCcc-eeecccccCCCCCCHHH--
Q 045577          265 AE---INPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELL-----QAWKLWSEGDPM-EIIDEQTKMKGPFSADE--  333 (392)
Q Consensus       265 ~~---~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~-----~~~diws~G~v~-~~ld~~~~~~~~~~~~~--  333 (392)
                      ..   +.+||+|||+++......  ......||+.|+| ||+.     .+.|+|+.|+++ +++.+.+++.+....+.  
T Consensus       171 ~~~~~~~~kl~DfG~a~~~~~~~--~~~~~~gt~~y~a-PE~l~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~  247 (494)
T 3lij_A          171 SKEKDALIKIVDFGLSAVFENQK--KMKERLGTAYYIA-PEVLRKKYDEKCDVWSIGVILFILLAGYPPFGGQTDQEILR  247 (494)
T ss_dssp             CSSTTCCEEECCCTTCEECBTTB--CBCCCCSCTTTCC-HHHHTTCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHH
T ss_pred             CCCCCCcEEEEECCCCeECCCCc--cccccCCCcCeeC-HHHHcccCCCchhHHHHHHHHHHHHhCCCCCCCCCHHHHHH
Confidence            64   459999999998865322  2233579999999 7765     378999999876 55555444433221111  


Q ss_pred             -----------------HHHHHHHHHhhcccCcCCCCCHHHHHH
Q 045577          334 -----------------LVKCIEVGLLCVQQRIEDWPTMSSVLT  360 (392)
Q Consensus       334 -----------------~~~~~~i~~~Cl~~dp~~RPsm~eVv~  360 (392)
                                       ...+.+++..|++.+|.+|||+.++++
T Consensus       248 ~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~  291 (494)
T 3lij_A          248 KVEKGKYTFDSPEWKNVSEGAKDLIKQMLQFDSQRRISAQQALE  291 (494)
T ss_dssp             HHHHTCCCCCSGGGTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             HHHhCCCCCCchhcccCCHHHHHHHHHHCCCChhhCccHHHHhc
Confidence                             224567888999999999999999874

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*

Probab=99.82  E-value=3.4e-21  Score=191.15  Aligned_cols=115  Identities=25%  Similarity=0.417  Sum_probs=87.4

Q ss_pred             CCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEcCCCCCeEeeeeceE
Q 045577          199 GEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEINPNISDFGPAR  278 (392)
Q Consensus       199 ~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~~~~~~kl~DFGla~  278 (392)
                      ...|+||||+++ ++....... .......+..++.||++||.|||+.   +|+||||||+|||++.++.+||+|||+++
T Consensus       103 ~~~~lv~e~~~~-~L~~~~~~~-~~l~~~~~~~i~~qil~aL~~LH~~---givHrDlkp~NILl~~~~~~kL~DFGla~  177 (432)
T 3n9x_A          103 DELYIVLEIADS-DLKKLFKTP-IFLTEEHIKTILYNLLLGENFIHES---GIIHRDLKPANCLLNQDCSVKVCDFGLAR  177 (432)
T ss_dssp             CCEEEEEECCSE-EHHHHHHSS-CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCE
T ss_pred             CeEEEEEecCCc-CHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHC---CCCCCCCCHHHeEECCCCCEEEccCCCcc
Confidence            568999999984 665544332 2234555889999999999999998   89999999999999999999999999999


Q ss_pred             EeCCCCc---------------------ceeceeeecccccCchhHH-------HHHHHhcCCCcc-eee
Q 045577          279 IFGDQTE---------------------EVTGRVIGTQTLKTVPELL-------QAWKLWSEGDPM-EII  319 (392)
Q Consensus       279 ~~~~~~~---------------------~~~~~~~gt~~y~a~~~~~-------~~~diws~G~v~-~~l  319 (392)
                      .......                     .......||+.|+| ||+.       .+.|+|+.|+++ +++
T Consensus       178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~A-PE~~~~~~~~~~~~DiwSlG~il~ell  246 (432)
T 3n9x_A          178 TINSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRA-PELILLQENYTKSIDIWSTGCIFAELL  246 (432)
T ss_dssp             EC-------------------------------CCCCCTTCC-HHHHTTCSCCCTHHHHHHHHHHHHHHH
T ss_pred             cccccccccccccccccccccccccchhccccCCCCCccccC-HHHHhcCCCCCcccccchHHHHHHHHH
Confidence            8652211                     12244688999999 7754       378999999987 455

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}

Probab=99.82  E-value=9.4e-21  Score=181.69  Aligned_cols=170  Identities=19%  Similarity=0.198  Sum_probs=126.0

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCC-CcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEE
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLP-DKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLL  263 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~-~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll  263 (392)
                      |++.++........+..+++|||+..+ ++.....+.. ......+..++.|++.||.|||+.   +|+||||||+||++
T Consensus        88 h~~Iv~~~~~~~~~~~~~lv~e~~~~g~~l~~~~~~~~-~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll  163 (335)
T 3dls_A           88 HANIIKVLDIFENQGFFQLVMEKHGSGLDLFAFIDRHP-RLDEPLASYIFRQLVSAVGYLRLK---DIIHRDIKDENIVI  163 (335)
T ss_dssp             CTTBCCEEEEEECSSEEEEEEECCTTSCBHHHHHHTCC-CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEE
T ss_pred             CCCEeeEEEEEeeCCEEEEEEEeCCCCccHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhC---CeEEeccCHHHEEE
Confidence            666666665555567789999999766 6655443332 234555788999999999999998   89999999999999


Q ss_pred             cCCCCCeEeeeeceEEeCCCCcceeceeeecccccCchhHH-------HHHHHhcCCCcc-eeecccccCCC--------
Q 045577          264 DAEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELL-------QAWKLWSEGDPM-EIIDEQTKMKG--------  327 (392)
Q Consensus       264 ~~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~-------~~~diws~G~v~-~~ld~~~~~~~--------  327 (392)
                      +.++.+||+|||+++......  ......||+.|+| ||+.       .+.|+|+.|+++ +++.+..++..        
T Consensus       164 ~~~~~~kL~Dfg~a~~~~~~~--~~~~~~gt~~y~a-PE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~  240 (335)
T 3dls_A          164 AEDFTIKLIDFGSAAYLERGK--LFYTFCGTIEYCA-PEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEETVEAA  240 (335)
T ss_dssp             CTTSCEEECCCTTCEECCTTC--CBCEECSCGGGCC-HHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSSGGGGTTTC
T ss_pred             cCCCcEEEeecccceECCCCC--ceeccCCCccccC-hhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhhHHHHHhhc
Confidence            999999999999998865322  2234679999999 7764       477999999876 44444322211        


Q ss_pred             -CCCHHHHHHHHHHHHhhcccCcCCCCCHHHHHHH
Q 045577          328 -PFSADELVKCIEVGLLCVQQRIEDWPTMSSVLTM  361 (392)
Q Consensus       328 -~~~~~~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~  361 (392)
                       ..+......+.+++..|++.||++||++.++++.
T Consensus       241 ~~~~~~~~~~l~~li~~~L~~dP~~Rps~~ell~h  275 (335)
T 3dls_A          241 IHPPYLVSKELMSLVSGLLQPVPERRTTLEKLVTD  275 (335)
T ss_dssp             CCCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHHC
T ss_pred             cCCCcccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence             0111122356677779999999999999999875

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*

Probab=99.82  E-value=1.2e-21  Score=187.27  Aligned_cols=169  Identities=20%  Similarity=0.211  Sum_probs=117.3

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEc
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLD  264 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~  264 (392)
                      |++.++.......++..|+||||+++ ++.....+... .....+..++.|++.||.|||+.   +|+||||||+||+++
T Consensus        92 h~~iv~~~~~~~~~~~~~lv~e~~~~-~L~~~~~~~~~-~~~~~~~~i~~ql~~~l~~LH~~---~ivH~Dlkp~NIll~  166 (329)
T 3gbz_A           92 HRNIIELKSVIHHNHRLHLIFEYAEN-DLKKYMDKNPD-VSMRVIKSFLYQLINGVNFCHSR---RCLHRDLKPQNLLLS  166 (329)
T ss_dssp             CTTBCCEEEEEEETTEEEEEEECCSE-EHHHHHHHCTT-CCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEE
T ss_pred             CCCcceEEEEEecCCEEEEEEecCCC-CHHHHHhhcCC-CCHHHHHHHHHHHHHHHHHHHhC---CEECCCCCHHHEEEe
Confidence            66666655554445678999999985 55544333222 34455788999999999999998   899999999999994


Q ss_pred             -----CCCCCeEeeeeceEEeCCCCcceeceeeecccccCchhHH-------HHHHHhcCCCcc-eeecccccCCCCCCH
Q 045577          265 -----AEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELL-------QAWKLWSEGDPM-EIIDEQTKMKGPFSA  331 (392)
Q Consensus       265 -----~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~-------~~~diws~G~v~-~~ld~~~~~~~~~~~  331 (392)
                           ..+.+||+|||+++...... .......||+.|+| ||+.       .+.|+|+.|+++ +++.+.+.+.+....
T Consensus       167 ~~~~~~~~~~kl~Dfg~a~~~~~~~-~~~~~~~~t~~y~a-PE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~  244 (329)
T 3gbz_A          167 VSDASETPVLKIGDFGLARAFGIPI-RQFTHEIITLWYRP-PEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEI  244 (329)
T ss_dssp             C-----CCEEEECCTTHHHHHC------------CCTTCC-HHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH
T ss_pred             cCCCCccceEEECcCCCccccCCcc-cccCCCcCCccccC-HHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCCCHH
Confidence                 44559999999997654221 12233578999999 7754       378999999876 555554444333222


Q ss_pred             HHH---------------------------------------------HHHHHHHHhhcccCcCCCCCHHHHHH
Q 045577          332 DEL---------------------------------------------VKCIEVGLLCVQQRIEDWPTMSSVLT  360 (392)
Q Consensus       332 ~~~---------------------------------------------~~~~~i~~~Cl~~dp~~RPsm~eVv~  360 (392)
                      +..                                             ..+.+++..|++.||++|||+.|+++
T Consensus       245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~  318 (329)
T 3gbz_A          245 DQLFKIFEVLGLPDDTTWPGVTALPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALE  318 (329)
T ss_dssp             HHHHHHHHHHCCCCTTTSTTGGGSTTCCTTCCCCCCCCHHHHHGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             HHHHHHHHHhCCCchhhhhhhhhhhhhhhhhhhhccccHhhhcccccCHHHHHHHHHHccCChhhCCCHHHHhC
Confidence            211                                             34457888999999999999999986

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}

Probab=99.82  E-value=1.3e-21  Score=187.90  Aligned_cols=169  Identities=17%  Similarity=0.203  Sum_probs=124.0

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEc
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLD  264 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~  264 (392)
                      |++.++........+..|++|||+. +++.....+.. ......+..++.|++.||.|||+.   +|+||||||+||+++
T Consensus        68 hpnIv~l~~~~~~~~~~~lv~E~~~-g~l~~~l~~~~-~l~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~  142 (336)
T 3h4j_B           68 HPHIIKLYDVITTPTDIVMVIEYAG-GELFDYIVEKK-RMTEDEGRRFFQQIICAIEYCHRH---KIVHRDLKPENLLLD  142 (336)
T ss_dssp             CTTBCCEEEEEECSSEEEEEECCCC-EEHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHHHH---TCCCCCCSTTTEEEC
T ss_pred             CCCCCeEEEEEEeCCEEEEEEECCC-CcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCchhhEEEc
Confidence            6666666655555677899999994 56655443333 234455789999999999999998   899999999999999


Q ss_pred             CCCCCeEeeeeceEEeCCCCcceeceeeecccccCchhHH-------HHHHHhcCCCcc-eeecccccCCCC--------
Q 045577          265 AEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELL-------QAWKLWSEGDPM-EIIDEQTKMKGP--------  328 (392)
Q Consensus       265 ~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~-------~~~diws~G~v~-~~ld~~~~~~~~--------  328 (392)
                      .++.+||+|||+++......  ......||+.|+| ||+.       .+.|+|+.|+++ +++.+..++.+.        
T Consensus       143 ~~~~~kl~DFG~s~~~~~~~--~~~~~~gt~~y~a-PE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~~~~  219 (336)
T 3h4j_B          143 DNLNVKIADFGLSNIMTDGN--FLKTSCGSPNYAA-PEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNLFKK  219 (336)
T ss_dssp             TTCCEEECCSSCTBTTTTSB--TTCCCTTSTTTSC-GGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSSTTCBCC
T ss_pred             CCCCEEEEEeccceeccCCc--ccccccCCcCcCC-HHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCccHHHHHHH
Confidence            99999999999987654322  2233579999999 6643       578999999876 444443332211        


Q ss_pred             -------CCHHHHHHHHHHHHhhcccCcCCCCCHHHHHHH
Q 045577          329 -------FSADELVKCIEVGLLCVQQRIEDWPTMSSVLTM  361 (392)
Q Consensus       329 -------~~~~~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~  361 (392)
                             .+......+.+++..|++.||.+|||+.|+++.
T Consensus       220 i~~~~~~~p~~~s~~~~~li~~~L~~dP~~Rpt~~eil~h  259 (336)
T 3h4j_B          220 VNSCVYVMPDFLSPGAQSLIRRMIVADPMQRITIQEIRRD  259 (336)
T ss_dssp             CCSSCCCCCTTSCHHHHHHHHTTSCSSGGGSCCHHHHTTC
T ss_pred             HHcCCCCCcccCCHHHHHHHHHHcCCChhHCcCHHHHHhC
Confidence                   111223456677789999999999999999864

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*

Probab=99.82  E-value=4.9e-21  Score=182.41  Aligned_cols=166  Identities=19%  Similarity=0.250  Sum_probs=121.7

Q ss_pred             CccccccCcCCCCCeeEEecCccCCCcChhhhhhhc-cccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEcC
Q 045577          187 GCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFEC-SKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDA  265 (392)
Q Consensus       187 GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~-~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~~  265 (392)
                      ++++........+..+++|||+ ++++.....+... ......+..++.|++.||.|||+.   +|+||||||+||+++.
T Consensus        78 ~i~~~~~~~~~~~~~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~  153 (339)
T 1z57_A           78 RCVQMLEWFEHHGHICIVFELL-GLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLHSN---KLTHTDLKPENILFVQ  153 (339)
T ss_dssp             CBCCEEEEEEETTEEEEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESC
T ss_pred             eeEeeecccccCCcEEEEEcCC-CCCHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHEEEec
Confidence            4555444444456789999999 5666554443332 234555789999999999999998   8999999999999987


Q ss_pred             -------------------CCCCeEeeeeceEEeCCCCcceeceeeecccccCchhHH------HHHHHhcCCCcc-eee
Q 045577          266 -------------------EINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EII  319 (392)
Q Consensus       266 -------------------~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~l  319 (392)
                                         ++.+||+|||+++.....    .....||+.|+| ||+.      .+.|+|+.|+++ +++
T Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~----~~~~~gt~~y~a-PE~~~~~~~~~~~Di~slG~il~el~  228 (339)
T 1z57_A          154 SDYTEAYNPKIKRDERTLINPDIKVVDFGSATYDDEH----HSTLVSTRHYRA-PEVILALGWSQPCDVWSIGCILIEYY  228 (339)
T ss_dssp             CCEEEEEC----CEEEEESCCCEEECCCSSCEETTSC----CCSSCSCGGGCC-HHHHTTSCCCTHHHHHHHHHHHHHHH
T ss_pred             cccccccCCccccccccccCCCceEeeCcccccCccc----cccccCCccccC-hHHhhCCCCCcchhhHHHHHHHHHHH
Confidence                               667999999999875421    223578999999 7765      378999999877 555


Q ss_pred             cccccCCCCCCH-----------------------------------------------------------HHHHHHHHH
Q 045577          320 DEQTKMKGPFSA-----------------------------------------------------------DELVKCIEV  340 (392)
Q Consensus       320 d~~~~~~~~~~~-----------------------------------------------------------~~~~~~~~i  340 (392)
                      .+...+......                                                           .....+.++
T Consensus       229 ~g~~pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l  308 (339)
T 1z57_A          229 LGFTVFPTHDSKEHLAMMERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDL  308 (339)
T ss_dssp             HSSCSCCCSCHHHHHHHHHHHHCSCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHH
T ss_pred             hCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhccchhHHhhccccccccccccchhhhcCcchhhhcccchhhHHHHHHH
Confidence            554444332211                                                           112456688


Q ss_pred             HHhhcccCcCCCCCHHHHHHH
Q 045577          341 GLLCVQQRIEDWPTMSSVLTM  361 (392)
Q Consensus       341 ~~~Cl~~dp~~RPsm~eVv~~  361 (392)
                      +..|++.||.+|||+.|+++.
T Consensus       309 i~~~L~~dP~~Rpt~~ell~h  329 (339)
T 1z57_A          309 IQKMLEYDPAKRITLREALKH  329 (339)
T ss_dssp             HHHHTCSSTTTSCCHHHHTTS
T ss_pred             HHHHhCcCcccccCHHHHhcC
Confidence            899999999999999998753

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}

Probab=99.82  E-value=3.1e-21  Score=189.15  Aligned_cols=155  Identities=23%  Similarity=0.273  Sum_probs=115.8

Q ss_pred             eeEEecCccCCCcChhhhh--hhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEc-CCCCCeEeeeece
Q 045577          201 VFLMFEGIKLPDKSEFTCE--FECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLD-AEINPNISDFGPA  277 (392)
Q Consensus       201 ~~lv~e~~~~~~l~~~~~~--~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~-~~~~~kl~DFGla  277 (392)
                      .++||||++++.+......  .........+..++.|+++||.|||+.   +|+||||||+||+++ .++.+||+|||++
T Consensus       113 ~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~~kL~DFG~a  189 (394)
T 4e7w_A          113 LNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSI---GICHRDIKPQNLLLDPPSGVLKLIDFGSA  189 (394)
T ss_dssp             EEEEEECCSEEHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEETTTTEEEECCCTTC
T ss_pred             EEEEeeccCccHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHEEEcCCCCcEEEeeCCCc
Confidence            6799999987544332211  112234455788999999999999998   899999999999999 7899999999999


Q ss_pred             EEeCCCCcceeceeeecccccCchhHH-------HHHHHhcCCCcc-eeecccccCCCCCCHHHH---------------
Q 045577          278 RIFGDQTEEVTGRVIGTQTLKTVPELL-------QAWKLWSEGDPM-EIIDEQTKMKGPFSADEL---------------  334 (392)
Q Consensus       278 ~~~~~~~~~~~~~~~gt~~y~a~~~~~-------~~~diws~G~v~-~~ld~~~~~~~~~~~~~~---------------  334 (392)
                      +.......  .....||+.|+| ||+.       .+.|+|+.|+++ +++.+++.+.+....+.+               
T Consensus       190 ~~~~~~~~--~~~~~~t~~y~a-PE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~p~~~~~  266 (394)
T 4e7w_A          190 KILIAGEP--NVSYICSRYYRA-PELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQLVEIIKVLGTPSREQI  266 (394)
T ss_dssp             EECCTTCC--CCSSCSCGGGCC-HHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHH
T ss_pred             ccccCCCC--CcccccCcCccC-HHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHH
Confidence            98643221  223568999999 7754       378999999977 566665555543322221               


Q ss_pred             -----------------------------HHHHHHHHhhcccCcCCCCCHHHHHHH
Q 045577          335 -----------------------------VKCIEVGLLCVQQRIEDWPTMSSVLTM  361 (392)
Q Consensus       335 -----------------------------~~~~~i~~~Cl~~dp~~RPsm~eVv~~  361 (392)
                                                   ..+.+++..|++.||.+||++.++++.
T Consensus       267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h  322 (394)
T 4e7w_A          267 KTMNPNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALCH  322 (394)
T ss_dssp             HHHCGGGSSSCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred             HhhChhhhhhccccccCCcHHHhccccCCHHHHHHHHHHhCCChhhCCCHHHHhcC
Confidence                                         245678889999999999999999874

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...

Probab=99.82  E-value=5.3e-21  Score=177.32  Aligned_cols=171  Identities=19%  Similarity=0.193  Sum_probs=123.8

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEc
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLD  264 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~  264 (392)
                      |++.++.......++..|++|||++++++........ ......+..++.|++.||.|||+.   +++|+||||+||+++
T Consensus        64 h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~  139 (276)
T 2yex_A           64 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDI-GMPEPDAQRFFHQLMAGVVYLHGI---GITHRDIKPENLLLD  139 (276)
T ss_dssp             CTTBCCEEEEEEETTEEEEEEECCTTEEGGGGSBTTT-BCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEC
T ss_pred             CCCceeeeeEEEcCCEEEEEEEecCCCcHHHHHhhcc-CCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCChHHEEEc
Confidence            4444444433333466899999999888876543322 234455789999999999999998   899999999999999


Q ss_pred             CCCCCeEeeeeceEEeCC-CCcceeceeeecccccCchhH-------HHHHHHhcCCCcc-eeecccccCCCCCCH----
Q 045577          265 AEINPNISDFGPARIFGD-QTEEVTGRVIGTQTLKTVPEL-------LQAWKLWSEGDPM-EIIDEQTKMKGPFSA----  331 (392)
Q Consensus       265 ~~~~~kl~DFGla~~~~~-~~~~~~~~~~gt~~y~a~~~~-------~~~~diws~G~v~-~~ld~~~~~~~~~~~----  331 (392)
                      .++.+||+|||++..... ..........|++.|+| ||.       ..+.|+|+.|+++ +++.+..++......    
T Consensus       140 ~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~a-PE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~  218 (276)
T 2yex_A          140 ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVA-PELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEY  218 (276)
T ss_dssp             TTCCEEECCCTTCEECEETTEECCBCCCCSCGGGCC-GGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTTSHHH
T ss_pred             cCCCEEEeeCCCccccCCCcchhcccCCccccCccC-hHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCchHHHHH
Confidence            999999999999987642 11222334678999999 654       3578999999876 555554333322111    


Q ss_pred             --------------HHHHHHHHHHHhhcccCcCCCCCHHHHHH
Q 045577          332 --------------DELVKCIEVGLLCVQQRIEDWPTMSSVLT  360 (392)
Q Consensus       332 --------------~~~~~~~~i~~~Cl~~dp~~RPsm~eVv~  360 (392)
                                    .....+.+++..|++.||++||++.++++
T Consensus       219 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~  261 (276)
T 2yex_A          219 SDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARITIPDIKK  261 (276)
T ss_dssp             HHHHTTCTTSTTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred             HHhhhcccccCchhhcCHHHHHHHHHHCCCCchhCCCHHHHhc
Confidence                          11235667888999999999999998876

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}

Probab=99.82  E-value=6.8e-21  Score=186.80  Aligned_cols=175  Identities=18%  Similarity=0.156  Sum_probs=127.6

Q ss_pred             CCCccccccCcCC--CCCeeEEecCccCCCcChhhhhhhc--cccchhhhhHHHHHHHhhhhcCcCCCCceeecccccce
Q 045577          185 SGGCKRNWEADCG--DGEVFLMFEGIKLPDKSEFTCEFEC--SKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSN  260 (392)
Q Consensus       185 s~GCvR~~~l~C~--~~~~~lv~e~~~~~~l~~~~~~~~~--~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~N  260 (392)
                      |++.++.......  ....|++|||++++++.....+...  ......+..++.|++.||.|||+.   +|+||||||+|
T Consensus        66 hpnIv~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~N  142 (396)
T 4eut_A           66 HKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLREN---GIVHRNIKPGN  142 (396)
T ss_dssp             CTTBCCEEEEEECTTTCCEEEEECCCTTEEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGG
T ss_pred             CCCCCeEEEeeccCCCCeeEEEEecCCCCCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHHC---CEEECCcCHHH
Confidence            4555554433221  2367999999999988775443221  135556889999999999999998   89999999999


Q ss_pred             eEE----cCCCCCeEeeeeceEEeCCCCcceeceeeecccccCchhHH--------------HHHHHhcCCCcc-eeecc
Q 045577          261 VLL----DAEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELL--------------QAWKLWSEGDPM-EIIDE  321 (392)
Q Consensus       261 Ill----~~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~--------------~~~diws~G~v~-~~ld~  321 (392)
                      |++    +.++.+||+|||+++......  ......||+.|+| ||+.              .+.|+|+.|+++ +++.+
T Consensus       143 Ill~~~~~~~~~~kL~DFG~a~~~~~~~--~~~~~~gt~~y~a-PE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg  219 (396)
T 4eut_A          143 IMRVIGEDGQSVYKLTDFGAARELEDDE--QFVSLYGTEEYLH-PDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATG  219 (396)
T ss_dssp             EEEEECTTSCEEEEECCGGGCEECCCGG--GSSCSSSCCTTCC-HHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred             EEEeecCCCceeEEEecCCCceEccCCC--ccccccCCccccC-HHHhhccccccccccCCCcHHHHHHHHHHHHHHHHC
Confidence            999    777789999999998865322  2223568999999 6653              367999999876 44444


Q ss_pred             cccCCC--------------------------------------------CCCHHHHHHHHHHHHhhcccCcCCCCCHHH
Q 045577          322 QTKMKG--------------------------------------------PFSADELVKCIEVGLLCVQQRIEDWPTMSS  357 (392)
Q Consensus       322 ~~~~~~--------------------------------------------~~~~~~~~~~~~i~~~Cl~~dp~~RPsm~e  357 (392)
                      ..++.+                                            .........+.+++..|++.||++||++.+
T Consensus       220 ~~Pf~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ll~~~L~~dP~~R~s~~e  299 (396)
T 4eut_A          220 SLPFRPFEGPRRNKEVMYKIITGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQ  299 (396)
T ss_dssp             SCSEECTTCTTTCHHHHHHHHHSCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHH
T ss_pred             CCCCCCCCcccchHHHHHHHhcCCCcccchhheeccCCCcccCccCCcccccchHHHhhchHHHHHhhccChhhhccHHH
Confidence            333221                                            111334456667888999999999999999


Q ss_pred             HHHHHccC
Q 045577          358 VLTMLSNE  365 (392)
Q Consensus       358 Vv~~L~~~  365 (392)
                      +++.|+..
T Consensus       300 ~l~~l~~i  307 (396)
T 4eut_A          300 FFAETSDI  307 (396)
T ss_dssp             HHHHHHHH
T ss_pred             HHHHHHHH
Confidence            99988764

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...

Probab=99.82  E-value=7.1e-21  Score=177.55  Aligned_cols=168  Identities=17%  Similarity=0.169  Sum_probs=125.7

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEc
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLD  264 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~  264 (392)
                      |++.++.......++..|++|||++++++.....+... .....+..++.|++.||.|||+.   +++||||||+||+++
T Consensus        73 h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~  148 (284)
T 2vgo_A           73 HPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGR-FDEQRSATFMEELADALHYCHER---KVIHRDIKPENLLMG  148 (284)
T ss_dssp             CTTBCCEEEEEECSSEEEEEECCCTTEEHHHHHHHHSS-CCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEEC
T ss_pred             CCCEeeEEEEEEcCCEEEEEEEeCCCCcHHHHHHhcCC-CCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEEc
Confidence            55655555544445678999999999888765544332 34455788999999999999998   899999999999999


Q ss_pred             CCCCCeEeeeeceEEeCCCCcceeceeeecccccCchhHH------HHHHHhcCCCcc-eeecccccCCCCCCHH-----
Q 045577          265 AEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIIDEQTKMKGPFSAD-----  332 (392)
Q Consensus       265 ~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld~~~~~~~~~~~~-----  332 (392)
                      .++.+||+|||++......   ......|++.|+| ||..      .+.|+|+.|+++ +++.+..++......+     
T Consensus       149 ~~~~~kl~Dfg~~~~~~~~---~~~~~~~~~~y~a-PE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~  224 (284)
T 2vgo_A          149 YKGELKIADFGWSVHAPSL---RRRTMCGTLDYLP-PEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRI  224 (284)
T ss_dssp             TTCCEEECCCTTCEECSSS---CBCCCCSCGGGCC-HHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHH
T ss_pred             CCCCEEEecccccccCccc---ccccccCCCCcCC-HHHhccCCCCcccchhhHHHHHHHHHHCCCCCCCCCHhHHHHHH
Confidence            9999999999999775422   1233578999999 7765      368999999876 4555543333221111     


Q ss_pred             ----------HHHHHHHHHHhhcccCcCCCCCHHHHHH
Q 045577          333 ----------ELVKCIEVGLLCVQQRIEDWPTMSSVLT  360 (392)
Q Consensus       333 ----------~~~~~~~i~~~Cl~~dp~~RPsm~eVv~  360 (392)
                                ....+.+++..|++.||++||++.++++
T Consensus       225 ~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~  262 (284)
T 2vgo_A          225 VNVDLKFPPFLSDGSKDLISKLLRYHPPQRLPLKGVME  262 (284)
T ss_dssp             HTTCCCCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             hccccCCCCcCCHHHHHHHHHHhhcCHhhCCCHHHHhh
Confidence                      1234567888999999999999999986

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*

Probab=99.82  E-value=3.9e-21  Score=196.25  Aligned_cols=170  Identities=18%  Similarity=0.101  Sum_probs=127.9

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhc-cccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEE
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFEC-SKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLL  263 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~-~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll  263 (392)
                      |++.++........+..|+||||++++++......... ...+..+..++.||+.||.|||+.   +|+||||||+|||+
T Consensus       243 hp~Iv~l~~~~~~~~~l~lVmEy~~gg~L~~~l~~~~~~~l~e~~~~~i~~qIl~aL~yLH~~---gIvHrDLKPeNILl  319 (576)
T 2acx_A          243 SRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRE---RIVYRDLKPENILL  319 (576)
T ss_dssp             CTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHSSSSCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEE
T ss_pred             CCCEeeEEEEEeeCCEEEEEEEcCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHC---CEeccCCchheEEE
Confidence            55555554444445679999999999999775544322 234555788999999999999998   89999999999999


Q ss_pred             cCCCCCeEeeeeceEEeCCCCcceeceeeecccccCchhHH------HHHHHhcCCCcc-eeecccccCCCCC---CHHH
Q 045577          264 DAEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIIDEQTKMKGPF---SADE  333 (392)
Q Consensus       264 ~~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld~~~~~~~~~---~~~~  333 (392)
                      +.++.+||+|||+++......  ......||+.|+| ||+.      .+.|+|+.|+++ +++.+.+++....   ..++
T Consensus       320 d~~g~vKL~DFGla~~~~~~~--~~~~~~GT~~Y~A-PEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~~~~~~~~~  396 (576)
T 2acx_A          320 DDHGHIRISDLGLAVHVPEGQ--TIKGRVGTVGYMA-PEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREE  396 (576)
T ss_dssp             CTTSCEEECCCTTCEECCTTC--CEECCCSCGGGCC-HHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCSSSCCCHHH
T ss_pred             eCCCCeEEEecccceecccCc--cccccCCCccccC-HHHHcCCCCCccchHHHHHHHHHHHHhCCCCCcccccchhHHH
Confidence            999999999999998865322  2223579999999 7765      378999999877 5666655554321   1122


Q ss_pred             H----------------HHHHHHHHhhcccCcCCCC-----CHHHHHH
Q 045577          334 L----------------VKCIEVGLLCVQQRIEDWP-----TMSSVLT  360 (392)
Q Consensus       334 ~----------------~~~~~i~~~Cl~~dp~~RP-----sm~eVv~  360 (392)
                      +                ..+.+++..|++.||.+||     ++.+|++
T Consensus       397 i~~~i~~~~~~~p~~~s~~~~dLI~~lL~~dP~~R~g~~~~sa~eil~  444 (576)
T 2acx_A          397 VERLVKEVPEEYSERFSPQARSLCSQLLCKDPAERLGCRGGSAREVKE  444 (576)
T ss_dssp             HHHHHHHCCCCCCTTSCHHHHHHHHHHTCSSGGGSTTCSSSHHHHHHT
T ss_pred             HHHHhhcccccCCccCCHHHHHHHHHhccCCHHHcCCCCCCCHHHHHh
Confidence            1                2456688899999999999     6788774

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*

Probab=99.82  E-value=8.7e-21  Score=176.72  Aligned_cols=170  Identities=17%  Similarity=0.158  Sum_probs=124.0

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEc
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLD  264 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~  264 (392)
                      |++.++.......++..+++|||++++++........ ......+..++.|++.||.|||+.   +++||||||+||+++
T Consensus        64 h~~i~~~~~~~~~~~~~~~v~e~~~~~~l~~~~~~~~-~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nil~~  139 (284)
T 3kk8_A           64 HPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVARE-FYSEADASHCIQQILESIAYCHSN---GIVHRNLKPENLLLA  139 (284)
T ss_dssp             CTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEES
T ss_pred             CCCcCeEEEEEEcCCEEEEEEecCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHC---CcCcCCCCHHHEEEe
Confidence            5555555444444566899999999998866544432 234455788999999999999998   899999999999998


Q ss_pred             CCCC---CeEeeeeceEEeCCCCcceeceeeecccccCchhHH------HHHHHhcCCCcc-eeecccccCCCCCCH---
Q 045577          265 AEIN---PNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIIDEQTKMKGPFSA---  331 (392)
Q Consensus       265 ~~~~---~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld~~~~~~~~~~~---  331 (392)
                      .++.   +||+|||++.......  ......||+.|+| ||..      .+.|+|+.|+++ +++.+..++.+....   
T Consensus       140 ~~~~~~~~kl~Dfg~~~~~~~~~--~~~~~~~~~~y~a-PE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~  216 (284)
T 3kk8_A          140 SKAKGAAVKLADFGLAIEVNDSE--AWHGFAGTPGYLS-PEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLY  216 (284)
T ss_dssp             SSSTTCCEEECCCTTCEECCSSC--BCCCSCSCGGGCC-HHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHH
T ss_pred             cCCCCCcEEEeeceeeEEcccCc--cccCCCCCcCCcC-chhhcCCCCCcccchHHHHHHHHHHHHCCCCCCCCchhHHH
Confidence            6655   9999999998765322  2223578999999 7764      478999999876 455543333221111   


Q ss_pred             ----------------HHHHHHHHHHHhhcccCcCCCCCHHHHHHH
Q 045577          332 ----------------DELVKCIEVGLLCVQQRIEDWPTMSSVLTM  361 (392)
Q Consensus       332 ----------------~~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~  361 (392)
                                      .....+.+++..|++.||++||++.++++.
T Consensus       217 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h  262 (284)
T 3kk8_A          217 AQIKAGAYDYPSPEWDTVTPEAKSLIDSMLTVNPKKRITADQALKV  262 (284)
T ss_dssp             HHHHHTCCCCCTTTTTTSCHHHHHHHHHHSCSSTTTSCCHHHHTTS
T ss_pred             HHHHhccccCCchhhcccCHHHHHHHHHHcccChhhCCCHHHHhcC
Confidence                            112346678889999999999999999873

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}

Probab=99.82  E-value=2.9e-21  Score=191.72  Aligned_cols=171  Identities=19%  Similarity=0.210  Sum_probs=116.9

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEc
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLD  264 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~  264 (392)
                      |++.++.......++..|++|||+.+ ++...............+..++.||++||.|||+.   +|+||||||+||+++
T Consensus        77 HpnIv~l~~~~~~~~~~~lv~E~~~g-~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlKp~NIll~  152 (432)
T 3p23_A           77 HPNVIRYFCTEKDRQFQYIAIELCAA-TLQEYVEQKDFAHLGLEPITLLQQTTSGLAHLHSL---NIVHRDLKPHNILIS  152 (432)
T ss_dssp             CTTBCCEEEEEEETTEEEEEEECCSE-EHHHHHHSSSCCCCSSCHHHHHHHHHHHHHHHHHT---TCCCCCCSTTSEEEC
T ss_pred             CCCcCeEEEEEecCCEEEEEEECCCC-CHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHHC---cCEeCCCCHHHEEEe
Confidence            66666665444345668999999974 55554433332223334678999999999999998   899999999999994


Q ss_pred             C-----CCCCeEeeeeceEEeCCCC--cceeceeeecccccCchhHHH---------HHHHhcCCCcc-eeec-ccccCC
Q 045577          265 A-----EINPNISDFGPARIFGDQT--EEVTGRVIGTQTLKTVPELLQ---------AWKLWSEGDPM-EIID-EQTKMK  326 (392)
Q Consensus       265 ~-----~~~~kl~DFGla~~~~~~~--~~~~~~~~gt~~y~a~~~~~~---------~~diws~G~v~-~~ld-~~~~~~  326 (392)
                      .     ...+||+|||+++......  ........||+.|+| ||+..         +.|+|+.|+++ +++. +...+.
T Consensus       153 ~~~~~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~gt~~y~A-PE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~  231 (432)
T 3p23_A          153 MPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVPGTEGWIA-PEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFG  231 (432)
T ss_dssp             CCBTTTBCCEEECCTTEEECC------------CCSCTTSCC-GGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTB
T ss_pred             cCCCCCceeEEEecccceeeccCCCcceeeccccCCCcCccC-hhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcc
Confidence            3     3357799999998765221  122334679999999 76542         68999999876 5665 332322


Q ss_pred             CCCC------------------HHHHHHHHHHHHhhcccCcCCCCCHHHHHH
Q 045577          327 GPFS------------------ADELVKCIEVGLLCVQQRIEDWPTMSSVLT  360 (392)
Q Consensus       327 ~~~~------------------~~~~~~~~~i~~~Cl~~dp~~RPsm~eVv~  360 (392)
                      ....                  ......+.+++..|++.||++||++.+|++
T Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~evl~  283 (432)
T 3p23_A          232 KSLQRQANILLGACSLDCLHPEKHEDVIARELIEKMIAMDPQKRPSAKHVLK  283 (432)
T ss_dssp             STTTHHHHHHTTCCCCTTSCTTCHHHHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             hhhHHHHHHHhccCCccccCccccccHHHHHHHHHHHhCCHhhCCCHHHHHh
Confidence            1111                  112233567888999999999999999983

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*

Probab=99.82  E-value=5.5e-21  Score=179.24  Aligned_cols=171  Identities=20%  Similarity=0.185  Sum_probs=126.0

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEc
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLD  264 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~  264 (392)
                      |++.++.......++..|++|||++++++........ ......+..++.|++.||.|||+.   +++||||||+||+++
T Consensus        74 h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~  149 (294)
T 2rku_A           74 HQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRK-ALTEPEARYYLRQIVLGCQYLHRN---RVIHRDLKLGNLFLN  149 (294)
T ss_dssp             CTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEC
T ss_pred             CCCEeeeeeeeccCCEEEEEEecCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEc
Confidence            4555554444334566899999999988876543332 234555889999999999999998   899999999999999


Q ss_pred             CCCCCeEeeeeceEEeCCCCcceeceeeecccccCchhHH------HHHHHhcCCCcc-eeecccccCCCCCCH------
Q 045577          265 AEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIIDEQTKMKGPFSA------  331 (392)
Q Consensus       265 ~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld~~~~~~~~~~~------  331 (392)
                      .++.+||+|||+++....... ......|++.|+| ||..      .+.|+|+.|+++ +++.+...+......      
T Consensus       150 ~~~~~kl~dfg~~~~~~~~~~-~~~~~~~~~~y~a-PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~  227 (294)
T 2rku_A          150 EDLEVKIGDFGLATKVEYDGE-RKKVLCGTPNYIA-PEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRI  227 (294)
T ss_dssp             TTCCEEECCCTTCEECCSTTC-CBCCCCSCCSSCC-HHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHH
T ss_pred             CCCCEEEEeccCceecccCcc-ccccccCCCCcCC-cchhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH
Confidence            999999999999988652221 2233578999999 7765      378999999876 455554333222111      


Q ss_pred             ---------HHHHHHHHHHHhhcccCcCCCCCHHHHHHH
Q 045577          332 ---------DELVKCIEVGLLCVQQRIEDWPTMSSVLTM  361 (392)
Q Consensus       332 ---------~~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~  361 (392)
                               .....+.+++..|++.||++||++.++++.
T Consensus       228 ~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~  266 (294)
T 2rku_A          228 KKNEYSIPKHINPVAASLIQKMLQTDPTARPTINELLND  266 (294)
T ss_dssp             HTTCCCCCTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred             hhccCCCccccCHHHHHHHHHHcccChhhCcCHHHHhhC
Confidence                     112345677889999999999999999874

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}

Probab=99.82  E-value=1e-20  Score=191.38  Aligned_cols=170  Identities=22%  Similarity=0.217  Sum_probs=128.5

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEc
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLD  264 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~  264 (392)
                      |++.++.......++..|+||||++++++......... ..+..+..++.|++.||.|||+.   +|+||||||+||+++
T Consensus       105 hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~-~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~  180 (504)
T 3q5i_A          105 HPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHK-FDECDAANIMKQILSGICYLHKH---NIVHRDIKPENILLE  180 (504)
T ss_dssp             CTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHHHSC-CCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEES
T ss_pred             CCCCCeEEEEEEcCCEEEEEEecCCCCcHHHHHHHcCC-CCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCcHHHEEEe
Confidence            66666665554445678999999999998765544332 34555789999999999999998   899999999999998


Q ss_pred             CCC---CCeEeeeeceEEeCCCCcceeceeeecccccCchhHH-----HHHHHhcCCCcc-eeecccccCCCCCCHHH--
Q 045577          265 AEI---NPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELL-----QAWKLWSEGDPM-EIIDEQTKMKGPFSADE--  333 (392)
Q Consensus       265 ~~~---~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~-----~~~diws~G~v~-~~ld~~~~~~~~~~~~~--  333 (392)
                      .++   .+||+|||+++......  ......||+.|+| ||+.     .+.|+|+.|+++ +++.+.+++.+....+.  
T Consensus       181 ~~~~~~~~kl~Dfg~a~~~~~~~--~~~~~~gt~~y~a-PE~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~  257 (504)
T 3q5i_A          181 NKNSLLNIKIVDFGLSSFFSKDY--KLRDRLGTAYYIA-PEVLKKKYNEKCDVWSCGVIMYILLCGYPPFGGQNDQDIIK  257 (504)
T ss_dssp             STTCCSSEEECCCTTCEECCTTS--CBCCCCSCTTTCC-HHHHTTCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHH
T ss_pred             cCCCCccEEEEECCCCEEcCCCC--ccccccCCcCCCC-HHHhccCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHH
Confidence            775   58999999998875322  2233579999999 7765     378999999977 55555444443322111  


Q ss_pred             -----------------HHHHHHHHHhhcccCcCCCCCHHHHHHH
Q 045577          334 -----------------LVKCIEVGLLCVQQRIEDWPTMSSVLTM  361 (392)
Q Consensus       334 -----------------~~~~~~i~~~Cl~~dp~~RPsm~eVv~~  361 (392)
                                       ...+.+++..|++.||.+|||+.++++.
T Consensus       258 ~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~e~l~h  302 (504)
T 3q5i_A          258 KVEKGKYYFDFNDWKNISDEAKELIKLMLTYDYNKRCTAEEALNS  302 (504)
T ss_dssp             HHHHCCCCCCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred             HHHcCCCCCCccccCCCCHHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence                             1346678889999999999999999853

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*

Probab=99.82  E-value=5.9e-21  Score=179.24  Aligned_cols=172  Identities=20%  Similarity=0.265  Sum_probs=121.9

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhh-------hccccchhhhhHHHHHHHhhhhcCcCCCCceeecccc
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEF-------ECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHK  257 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~-------~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlK  257 (392)
                      |++.++........+..|++|||++++++.......       ........+..++.|++.||.|||+.   +++|||||
T Consensus        72 h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~  148 (303)
T 2vwi_A           72 HPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKN---GQIHRDVK  148 (303)
T ss_dssp             CTTBCCEEEEEESSSCEEEEEECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCS
T ss_pred             CCCEeeEEEEEeecCCcEEEehhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhC---CCCCCCCC
Confidence            666666665555567899999999999887644321       11234555789999999999999998   89999999


Q ss_pred             cceeEEcCCCCCeEeeeeceEEeCCCC----cceeceeeecccccCchhHHH-------HHHHhcCCCcc-eeecccccC
Q 045577          258 TSNVLLDAEINPNISDFGPARIFGDQT----EEVTGRVIGTQTLKTVPELLQ-------AWKLWSEGDPM-EIIDEQTKM  325 (392)
Q Consensus       258 p~NIll~~~~~~kl~DFGla~~~~~~~----~~~~~~~~gt~~y~a~~~~~~-------~~diws~G~v~-~~ld~~~~~  325 (392)
                      |+||+++.++.+||+|||++.......    ........||+.|+| ||+..       +.|+|+.|+++ +++.+..++
T Consensus       149 p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~y~a-PE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf  227 (303)
T 2vwi_A          149 AGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMA-PEVMEQVRGYDFKADIWSFGITAIELATGAAPY  227 (303)
T ss_dssp             GGGEEECTTCCEEECCCHHHHHCC---------------CCCTTCC-HHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTT
T ss_pred             hhhEEEcCCCCEEEEeccchheeccCCCccchhhhcccCCCccccC-HHHhccccCCCchhhHHHHHHHHHHHHhCCCCC
Confidence            999999999999999999987543211    112233578999999 76543       57999999876 455443332


Q ss_pred             CCCCCH-------------------------HHHHHHHHHHHhhcccCcCCCCCHHHHHH
Q 045577          326 KGPFSA-------------------------DELVKCIEVGLLCVQQRIEDWPTMSSVLT  360 (392)
Q Consensus       326 ~~~~~~-------------------------~~~~~~~~i~~~Cl~~dp~~RPsm~eVv~  360 (392)
                      ......                         .....+.+++..|++.||.+||++.++++
T Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~  287 (303)
T 2vwi_A          228 HKYPPMKVLMLTLQNDPPSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLR  287 (303)
T ss_dssp             TTSCGGGHHHHHHTSSCCCTTC-----CCCCCCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred             ccCchhhHHHHHhccCCCccccccccchhhhhhhHHHHHHHHHHccCChhhCcCHHHHhh
Confidence            211100                         11134667888999999999999999986

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*

Probab=99.82  E-value=6.5e-21  Score=182.93  Aligned_cols=169  Identities=20%  Similarity=0.238  Sum_probs=127.4

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChh------hhhh-hccccchhhhhHHHHHHHhhhhcCc-CCCCceeeccc
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEF------TCEF-ECSKYSSYVTNILYGIARVILYLPE-DSRLEIIHRDH  256 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~------~~~~-~~~~~~~~~~~i~~~ia~gL~yLH~-~~~~~iiHrDl  256 (392)
                      |+++++........+..|++|||++++++...      ..+. ........+..++.|++.||.|||+ .   +++||||
T Consensus       102 h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---~i~H~dl  178 (348)
T 2pml_X          102 NEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEK---NICHRDV  178 (348)
T ss_dssp             CTTBCCCSEEEESSSEEEEEEECCTTCBSSEESSSEESSCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTS---CEECCCC
T ss_pred             CCCcceEEEEEeeCCeEEEEEeccCCCcHHHHHHHhhhhhhccccCCCHHHHHHHHHHHHHHHHHHhccC---CEeecCC
Confidence            67777776665556789999999999988765      3221 2333555678999999999999998 7   8999999


Q ss_pred             ccceeEEcCCCCCeEeeeeceEEeCCCCcceeceeeecccccCchhHH--------HHHHHhcCCCcc-eeecccccCCC
Q 045577          257 KTSNVLLDAEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELL--------QAWKLWSEGDPM-EIIDEQTKMKG  327 (392)
Q Consensus       257 Kp~NIll~~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~--------~~~diws~G~v~-~~ld~~~~~~~  327 (392)
                      ||+||+++.++.+||+|||++......   ......|++.|+| ||..        .+.|+|+.|+++ +++.+..++..
T Consensus       179 ~p~Nil~~~~~~~kl~dfg~~~~~~~~---~~~~~~~~~~y~a-PE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~  254 (348)
T 2pml_X          179 KPSNILMDKNGRVKLSDFGESEYMVDK---KIKGSRGTYEFMP-PEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSL  254 (348)
T ss_dssp             CGGGEEECTTSCEEECCCTTCEECBTT---EECSSCSCGGGCC-GGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred             ChHhEEEcCCCcEEEeccccccccccc---cccCCCCCcCccC-chhhcCCCCCCcchhhHHHHHHHHHHHHhCCCCCCC
Confidence            999999999999999999999876432   3334578999999 6543        278999999876 44444333322


Q ss_pred             CCC-----------------------------------HHHHHHHHHHHHhhcccCcCCCCCHHHHHH
Q 045577          328 PFS-----------------------------------ADELVKCIEVGLLCVQQRIEDWPTMSSVLT  360 (392)
Q Consensus       328 ~~~-----------------------------------~~~~~~~~~i~~~Cl~~dp~~RPsm~eVv~  360 (392)
                      ...                                   ......+.+++..|++.||.+||++.++++
T Consensus       255 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~e~l~  322 (348)
T 2pml_X          255 KISLVELFNNIRTKNIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALK  322 (348)
T ss_dssp             SSCSHHHHHHHTSCCCCCCCSSSSSTTTTCC--------CCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred             CCcHHHHHHHHhccCcCCccchhhhhccccccccccchhhcCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence            211                                   112245667888999999999999999986

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}

Probab=99.82  E-value=2.3e-21  Score=184.62  Aligned_cols=162  Identities=21%  Similarity=0.245  Sum_probs=105.7

Q ss_pred             CCeeEEecCccCCCcChhhhh--hhccccchhhhhHHHHHHHhhhhcCcCCCCc--eeecccccceeEEcCCCCCeEeee
Q 045577          199 GEVFLMFEGIKLPDKSEFTCE--FECSKYSSYVTNILYGIARVILYLPEDSRLE--IIHRDHKTSNVLLDAEINPNISDF  274 (392)
Q Consensus       199 ~~~~lv~e~~~~~~l~~~~~~--~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~--iiHrDlKp~NIll~~~~~~kl~DF  274 (392)
                      ...+++|||+. +++......  .........+..++.|++.||.|||+.   +  |+||||||+||+++.++.+||+||
T Consensus       107 ~~~~lv~e~~~-g~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~~~ivH~Dikp~NIl~~~~~~~kl~Df  182 (337)
T 3ll6_A          107 AEFLLLTELCK-GQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQ---KPPIIHRDLKVENLLLSNQGTIKLCDF  182 (337)
T ss_dssp             EEEEEEEECCS-EEHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHHHTS---SSCCBCCCCCGGGCEECTTSCEEBCCC
T ss_pred             ceEEEEEEecC-CCHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhC---CCCEEEccCCcccEEECCCCCEEEecC
Confidence            34799999997 455443322  222345556889999999999999997   7  999999999999999999999999


Q ss_pred             eceEEeCCCCcc-----------eeceeeecccccCchhHH---------HHHHHhcCCCcc-eeecccccCCCCCC---
Q 045577          275 GPARIFGDQTEE-----------VTGRVIGTQTLKTVPELL---------QAWKLWSEGDPM-EIIDEQTKMKGPFS---  330 (392)
Q Consensus       275 Gla~~~~~~~~~-----------~~~~~~gt~~y~a~~~~~---------~~~diws~G~v~-~~ld~~~~~~~~~~---  330 (392)
                      |+++........           ......||+.|+| ||+.         .+.|+|++|+++ +++.+..++.....   
T Consensus       183 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~a-PE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~  261 (337)
T 3ll6_A          183 GSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRT-PEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAKLRI  261 (337)
T ss_dssp             TTCBCCSSCC--------------------------------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC--------
T ss_pred             ccceeccccCcccccccccccchhhccccCCCCcCC-hhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCCcchhHHHh
Confidence            999876422111           1113468999999 7654         488999999876 44444333221110   


Q ss_pred             ----------HHHHHHHHHHHHhhcccCcCCCCCHHHHHHHHccC
Q 045577          331 ----------ADELVKCIEVGLLCVQQRIEDWPTMSSVLTMLSNE  365 (392)
Q Consensus       331 ----------~~~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~L~~~  365 (392)
                                ......+.+++..|++.||++||++.++++.|+..
T Consensus       262 ~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~~~  306 (337)
T 3ll6_A          262 VNGKYSIPPHDTQYTVFHSLIRAMLQVNPEERLSIAEVVHQLQEI  306 (337)
T ss_dssp             ----CCCCTTCCSSGGGHHHHHHHSCSSGGGSCCHHHHHHHHHHH
T ss_pred             hcCcccCCcccccchHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence                      11112355677899999999999999999999875

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B

Probab=99.82  E-value=5.8e-21  Score=194.21  Aligned_cols=171  Identities=21%  Similarity=0.115  Sum_probs=126.6

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhh---ccccchhhhhHHHHHHHhhhhcCcCCCCceeeccccccee
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFE---CSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNV  261 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~---~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NI  261 (392)
                      |++.++........+..|+||||++++++........   ....+..+..++.||+.||.|||+.   +|+||||||+||
T Consensus       244 hp~Iv~l~~~~~~~~~l~lVmE~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH~~---gIvHrDLKP~NI  320 (543)
T 3c4z_A          244 SRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQR---NIIYRDLKPENV  320 (543)
T ss_dssp             CTTBCCEEEEEECSSEEEEEECCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGE
T ss_pred             CCCEeeEEEEEeeCCEEEEEEEeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHHHc---CCcccCCChHHE
Confidence            5555555444444567999999999999977554322   1234555788999999999999998   899999999999


Q ss_pred             EEcCCCCCeEeeeeceEEeCCCCcceeceeeecccccCchhHH------HHHHHhcCCCcc-eeecccccCCCCC---CH
Q 045577          262 LLDAEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIIDEQTKMKGPF---SA  331 (392)
Q Consensus       262 ll~~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld~~~~~~~~~---~~  331 (392)
                      +++.++.+||+|||+++.+.... .......||+.|+| ||+.      .+.|+|+.|+++ +++.+.+++.+..   ..
T Consensus       321 Ll~~~g~vkL~DFGla~~~~~~~-~~~~~~~GT~~Y~A-PE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~~~~~~~  398 (543)
T 3c4z_A          321 LLDDDGNVRISDLGLAVELKAGQ-TKTKGYAGTPGFMA-PELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVEN  398 (543)
T ss_dssp             EECTTSCEEECCCTTCEECCTTC-CCBCCCCSCTTTSC-HHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCTTCCCCH
T ss_pred             EEeCCCCEEEeecceeeeccCCC-cccccccCCccccC-hhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCCccchhH
Confidence            99999999999999999865322 22333589999999 7765      378999999977 5666655554321   11


Q ss_pred             HH----------------HHHHHHHHHhhcccCcCCCCCH-----HHHHH
Q 045577          332 DE----------------LVKCIEVGLLCVQQRIEDWPTM-----SSVLT  360 (392)
Q Consensus       332 ~~----------------~~~~~~i~~~Cl~~dp~~RPsm-----~eVv~  360 (392)
                      .+                ...+.+++..|++.||++||++     .+|.+
T Consensus       399 ~~~~~~i~~~~~~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~a~ei~~  448 (543)
T 3c4z_A          399 KELKQRVLEQAVTYPDKFSPASKDFCEALLQKDPEKRLGFRDGSCDGLRT  448 (543)
T ss_dssp             HHHHHHHHHCCCCCCTTSCHHHHHHHHHHSCSSGGGSCCCBTTBSHHHHT
T ss_pred             HHHHHHHhhcccCCCcccCHHHHHHHHHhccCCHhHCCCCcccCHHHHHc
Confidence            11                2245668889999999999975     55653

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*

Probab=99.81  E-value=1.2e-20  Score=176.98  Aligned_cols=169  Identities=20%  Similarity=0.237  Sum_probs=125.6

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEc
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLD  264 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~  264 (392)
                      |++.++.......++..|++|||++++++........ ......+..++.|++.||.|||+.   +++|+||||+||+++
T Consensus        83 h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~  158 (298)
T 1phk_A           83 HPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKV-TLSEKETRKIMRALLEVICALHKL---NIVHRDLKPENILLD  158 (298)
T ss_dssp             CTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEC
T ss_pred             CCCEeeeeeeeccCCeEEEEEeccCCCcHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcceEEEc
Confidence            4555554444334567899999999998877554432 234455889999999999999998   899999999999999


Q ss_pred             CCCCCeEeeeeceEEeCCCCcceeceeeecccccCchhHHH------------HHHHhcCCCcc-eeecccccCCCCCC-
Q 045577          265 AEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELLQ------------AWKLWSEGDPM-EIIDEQTKMKGPFS-  330 (392)
Q Consensus       265 ~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~~------------~~diws~G~v~-~~ld~~~~~~~~~~-  330 (392)
                      .++.+||+|||++.......  ......|++.|+| ||+..            +.|+|+.|+++ +++.+...+..... 
T Consensus       159 ~~~~~kl~dfg~~~~~~~~~--~~~~~~~~~~y~a-PE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~  235 (298)
T 1phk_A          159 DDMNIKLTDFGFSCQLDPGE--KLREVCGTPSYLA-PEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQM  235 (298)
T ss_dssp             TTCCEEECCCTTCEECCTTC--CBCCCCSCGGGCC-HHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH
T ss_pred             CCCcEEEecccchhhcCCCc--ccccccCCccccC-HHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcCccHH
Confidence            99999999999998765322  2233578999999 77653            67999999876 45554333322111 


Q ss_pred             ------------------HHHHHHHHHHHHhhcccCcCCCCCHHHHHH
Q 045577          331 ------------------ADELVKCIEVGLLCVQQRIEDWPTMSSVLT  360 (392)
Q Consensus       331 ------------------~~~~~~~~~i~~~Cl~~dp~~RPsm~eVv~  360 (392)
                                        ......+.+++..|++.||++||++.++++
T Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~  283 (298)
T 1phk_A          236 LMLRMIMSGNYQFGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALA  283 (298)
T ss_dssp             HHHHHHHHTCCCCCTTTGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTT
T ss_pred             HHHHHHhcCCcccCcccccccCHHHHHHHHHHccCCcccCCCHHHHHh
Confidence                              112235677888999999999999999875

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}

Probab=99.81  E-value=5.4e-21  Score=187.97  Aligned_cols=172  Identities=22%  Similarity=0.233  Sum_probs=116.4

Q ss_pred             CCCccccccCc--CCCCCeeEEecCccCCCcChhhhhhh--------ccccchhhhhHHHHHHHhhhhcCcCCCCceeec
Q 045577          185 SGGCKRNWEAD--CGDGEVFLMFEGIKLPDKSEFTCEFE--------CSKYSSYVTNILYGIARVILYLPEDSRLEIIHR  254 (392)
Q Consensus       185 s~GCvR~~~l~--C~~~~~~lv~e~~~~~~l~~~~~~~~--------~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHr  254 (392)
                      |++.++.....  ..+...|++|||+.+ ++........        .......+..++.||+.||.|||+.   +|+||
T Consensus        77 hpniv~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~---~ivH~  152 (405)
T 3rgf_A           77 HPNVISLQKVFLSHADRKVWLLFDYAEH-DLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHAN---WVLHR  152 (405)
T ss_dssp             CTTBCCCCEEEEETTTTEEEEEEECCSE-EHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHHT---TCCCC
T ss_pred             CCCeeeEeeEEecCCCCeEEEEEeCCCC-CHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHhC---CEeCC
Confidence            56666655544  234678999999986 4333221111        1134555788999999999999998   89999


Q ss_pred             ccccceeEE----cCCCCCeEeeeeceEEeCCCC--cceeceeeecccccCchhHH-------HHHHHhcCCCcc-eeec
Q 045577          255 DHKTSNVLL----DAEINPNISDFGPARIFGDQT--EEVTGRVIGTQTLKTVPELL-------QAWKLWSEGDPM-EIID  320 (392)
Q Consensus       255 DlKp~NIll----~~~~~~kl~DFGla~~~~~~~--~~~~~~~~gt~~y~a~~~~~-------~~~diws~G~v~-~~ld  320 (392)
                      ||||+|||+    +.++.+||+|||+++.+....  ........||+.|+| ||+.       .+.|+|+.|+++ +++.
T Consensus       153 Dlkp~NIll~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~a-PE~~~~~~~~~~~~DiwSlG~il~ell~  231 (405)
T 3rgf_A          153 DLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRA-PELLLGARHYTKAIDIWAIGCIFAELLT  231 (405)
T ss_dssp             CCCGGGEEECCSSTTTTCEEECCTTCCC----------------CCCTTCC-HHHHTTCCSCCHHHHHHHHHHHHHHHHH
T ss_pred             CcCHHHeEEecCCCCCCcEEEEECCCceecCCCCcccccCCCceecCcccC-chhhcCCCcccchhhhHHHHHHHHHHHh
Confidence            999999999    677899999999998765221  122334678999999 7754       468999999977 5666


Q ss_pred             ccccCCCCCC---------HHH-----------------------------------------------------HHHHH
Q 045577          321 EQTKMKGPFS---------ADE-----------------------------------------------------LVKCI  338 (392)
Q Consensus       321 ~~~~~~~~~~---------~~~-----------------------------------------------------~~~~~  338 (392)
                      +.+.+.+...         .+.                                                     ...+.
T Consensus       232 g~~pf~~~~~~~~~~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  311 (405)
T 3rgf_A          232 SEPIFHCRQEDIKTSNPYHHDQLDRIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAF  311 (405)
T ss_dssp             SSCTTCCCC------CCCCHHHHHHHHHHHCCCCTTTCGGGGGSTTHHHHHHHCCGGGGTTCCHHHHHHTTTCCTTSHHH
T ss_pred             CCCCCCCccccccccccchHHHHHHHHHhhCCCChhhcchhhcCcchhhhhhhccccCCCcchhhhhHhhcCCCCCHHHH
Confidence            5544432211         011                                                     12455


Q ss_pred             HHHHhhcccCcCCCCCHHHHHHH
Q 045577          339 EVGLLCVQQRIEDWPTMSSVLTM  361 (392)
Q Consensus       339 ~i~~~Cl~~dp~~RPsm~eVv~~  361 (392)
                      +++..|++.||.+|||+.|+++.
T Consensus       312 ~Ll~~~L~~dP~~R~ta~e~L~h  334 (405)
T 3rgf_A          312 HLLQKLLTMDPIKRITSEQAMQD  334 (405)
T ss_dssp             HHHHHHSCSSGGGSCCHHHHHTS
T ss_pred             HHHHHHccCCcccCCCHHHHhcC
Confidence            77889999999999999999875

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A

Probab=99.81  E-value=4e-21  Score=180.12  Aligned_cols=160  Identities=19%  Similarity=0.257  Sum_probs=113.7

Q ss_pred             CCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEcCCCCCeEeeeece
Q 045577          198 DGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEINPNISDFGPA  277 (392)
Q Consensus       198 ~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~~~~~~kl~DFGla  277 (392)
                      .+..|++|||++++++...............+..++.|++.||.|||++   +++||||||+||+++.++.+||+|||++
T Consensus        87 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dlkp~Nil~~~~~~~kl~dfg~~  163 (303)
T 1zy4_A           87 KSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFRQILEALSYIHSQ---GIIHRDLKPMNIFIDESRNVKIGDFGLA  163 (303)
T ss_dssp             EEEEEEEEECCCSCBHHHHHHHSCGGGCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECCCCCC
T ss_pred             CCceEEEEecCCCCCHHHhhhccccccchHHHHHHHHHHHHHHHHHHhC---CeecccCCHHhEEEcCCCCEEEeeCcch
Confidence            3568999999999999876554333334455788999999999999998   8999999999999999999999999998


Q ss_pred             EEeCCCC-------------cceeceeeecccccCchhHH-------HHHHHhcCCCcc-eeeccc--------------
Q 045577          278 RIFGDQT-------------EEVTGRVIGTQTLKTVPELL-------QAWKLWSEGDPM-EIIDEQ--------------  322 (392)
Q Consensus       278 ~~~~~~~-------------~~~~~~~~gt~~y~a~~~~~-------~~~diws~G~v~-~~ld~~--------------  322 (392)
                      +......             ........|++.|+| ||..       .+.|+|+.|+++ +++.+.              
T Consensus       164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~a-PE~~~~~~~~~~~~Di~slG~il~~l~~p~~~~~~~~~~~~~~~  242 (303)
T 1zy4_A          164 KNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVA-TEVLDGTGHYNEKIDMYSLGIIFFEMIYPFSTGMERVNILKKLR  242 (303)
T ss_dssp             SCTTC-------------------------CTTSC-HHHHTSCSCCCTHHHHHHHHHHHHHHHSCCSSHHHHHHHHHHHH
T ss_pred             hhcccccchhccccccccccccccccCCCcccccC-cccccCCCCCcchhhHHHHHHHHHHHHhccCCchhHHHHHHhcc
Confidence            7643211             112234578999999 7654       378999999876 333210              


Q ss_pred             ---ccCCCCCCHHHHHHHHHHHHhhcccCcCCCCCHHHHHHH
Q 045577          323 ---TKMKGPFSADELVKCIEVGLLCVQQRIEDWPTMSSVLTM  361 (392)
Q Consensus       323 ---~~~~~~~~~~~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~  361 (392)
                         ..++..........+.+++..|++.||++||++.++++.
T Consensus       243 ~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h  284 (303)
T 1zy4_A          243 SVSIEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLNS  284 (303)
T ss_dssp             STTCCCCTTCCTTTSHHHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred             ccccccCccccccchHHHHHHHHHHHhcCcccCcCHHHHhCC
Confidence               011222223333456778889999999999999999863

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A

Probab=99.81  E-value=7e-21  Score=177.77  Aligned_cols=170  Identities=19%  Similarity=0.247  Sum_probs=114.9

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhh---hhhccccchhhhhHHHHHHHhhhhcCcCCCCceeeccccccee
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTC---EFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNV  261 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~---~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NI  261 (392)
                      |++.++.......++..|++|||+++ ++.....   .......+..+..++.|++.||.|||++.  +++||||||+||
T Consensus        65 h~~iv~~~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~--~i~H~dlkp~Ni  141 (290)
T 3fme_A           65 CPFTVTFYGALFREGDVWICMELMDT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKL--SVIHRDVKPSNV  141 (290)
T ss_dssp             CTTBCCEEEEEECSSSEEEEEECCSE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHS--CCCCCCCSGGGC
T ss_pred             CCeEEEEeeeeeccCCEEEEEehhcc-chHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcC--CeecCCCCHHHE
Confidence            56666655554456789999999985 4433221   12223355567899999999999999853  699999999999


Q ss_pred             EEcCCCCCeEeeeeceEEeCCCCcceeceeeecccccCchhHH----------HHHHHhcCCCcc-eeecccccCCCCCC
Q 045577          262 LLDAEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELL----------QAWKLWSEGDPM-EIIDEQTKMKGPFS  330 (392)
Q Consensus       262 ll~~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~----------~~~diws~G~v~-~~ld~~~~~~~~~~  330 (392)
                      +++.++.+||+|||+++......  ......||+.|+| ||..          .+.|+|+.|+++ +++.+..++.....
T Consensus       142 l~~~~~~~kl~Dfg~~~~~~~~~--~~~~~~~t~~y~a-PE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~  218 (290)
T 3fme_A          142 LINALGQVKMCDFGISGYLVDDV--AKDIDAGCKPYMA-PERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGT  218 (290)
T ss_dssp             EECTTCCEEBCCC-----------------CCCCCCSC-HHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCSC
T ss_pred             EECCCCCEEEeecCCcccccccc--cccccCCCccccC-hhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccCc
Confidence            99999999999999998764322  2223468999999 7763          478999999876 45555433322111


Q ss_pred             H------------------HHHHHHHHHHHhhcccCcCCCCCHHHHHH
Q 045577          331 A------------------DELVKCIEVGLLCVQQRIEDWPTMSSVLT  360 (392)
Q Consensus       331 ~------------------~~~~~~~~i~~~Cl~~dp~~RPsm~eVv~  360 (392)
                      .                  .....+.+++..|++.||++|||+.++++
T Consensus       219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~e~l~  266 (290)
T 3fme_A          219 PFQQLKQVVEEPSPQLPADKFSAEFVDFTSQCLKKNSKERPTYPELMQ  266 (290)
T ss_dssp             HHHHHHHHHHSCCCCCCTTTSCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred             hHHHHHHHhccCCCCcccccCCHHHHHHHHHHhhcChhhCcCHHHHHh
Confidence            1                  11235667888999999999999999986

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7

Probab=99.81  E-value=1.5e-20  Score=182.57  Aligned_cols=156  Identities=22%  Similarity=0.296  Sum_probs=118.1

Q ss_pred             CCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEcCCCCCeEeeeeceE
Q 045577          199 GEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEINPNISDFGPAR  278 (392)
Q Consensus       199 ~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~~~~~~kl~DFGla~  278 (392)
                      .+.|++|||+ ++++......  .......+..++.|+++||.|||+.   +|+||||||+||+++.++.+||+|||+++
T Consensus       103 ~~~~lv~e~~-~~~L~~~~~~--~~l~~~~~~~~~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~  176 (367)
T 1cm8_A          103 TDFYLVMPFM-GTDLGKLMKH--EKLGEDRIQFLVYQMLKGLRYIHAA---GIIHRDLKPGNLAVNEDCELKILDFGLAR  176 (367)
T ss_dssp             CCCEEEEECC-SEEHHHHHHH--CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCE
T ss_pred             ceEEEEEecC-CCCHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCcCHHHEEEcCCCCEEEEeeeccc
Confidence            4579999999 5666554332  2234455788999999999999998   89999999999999999999999999998


Q ss_pred             EeCCCCcceeceeeecccccCchhHHH-------HHHHhcCCCcc-eeecccccCCCCCCHHHH----------------
Q 045577          279 IFGDQTEEVTGRVIGTQTLKTVPELLQ-------AWKLWSEGDPM-EIIDEQTKMKGPFSADEL----------------  334 (392)
Q Consensus       279 ~~~~~~~~~~~~~~gt~~y~a~~~~~~-------~~diws~G~v~-~~ld~~~~~~~~~~~~~~----------------  334 (392)
                      .....    .....||+.|+| ||+..       +.|+|+.|+++ +++.+++.+.+....+++                
T Consensus       177 ~~~~~----~~~~~~t~~y~a-PE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~~~~~~~~  251 (367)
T 1cm8_A          177 QADSE----MTGYVVTRWYRA-PEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQ  251 (367)
T ss_dssp             ECCSS----CCSSCSCGGGCC-THHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHH
T ss_pred             ccccc----cCcCcCCCCcCC-HHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHH
Confidence            75422    223578999999 76553       57999999977 566665555443322221                


Q ss_pred             ------------------------------HHHHHHHHhhcccCcCCCCCHHHHHHH--HccC
Q 045577          335 ------------------------------VKCIEVGLLCVQQRIEDWPTMSSVLTM--LSNE  365 (392)
Q Consensus       335 ------------------------------~~~~~i~~~Cl~~dp~~RPsm~eVv~~--L~~~  365 (392)
                                                    ..+.+++..|++.||++|||+.++++.  +++.
T Consensus       252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~mL~~dP~~R~t~~e~l~hp~f~~~  314 (367)
T 1cm8_A          252 RLQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHPYFESL  314 (367)
T ss_dssp             TCSCHHHHHHHHHSCCCCCCCGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGTTT
T ss_pred             HhhhHHHHHHHHhCCCCCCCCHHHHCCCCCHHHHHHHHHHccCChhHCCCHHHHhcChHHHhh
Confidence                                          235567789999999999999999874  5543

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...

Probab=99.81  E-value=1.3e-20  Score=175.38  Aligned_cols=169  Identities=18%  Similarity=0.185  Sum_probs=122.6

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEc
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLD  264 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~  264 (392)
                      |++.++........+..+++|||++++++.....+... .....+..++.|++.||.|||+.   +++||||||+||+++
T Consensus        67 h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~  142 (283)
T 3bhy_A           67 HPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKES-LTEDEATQFLKQILDGVHYLHSK---RIAHFDLKPENIMLL  142 (283)
T ss_dssp             CTTBCCEEEEEECSSEEEEEEECCCSCBHHHHHHHHSS-CCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEES
T ss_pred             CCCeeehhheecCCCeEEEEEeecCCCcHHHHHHhcCC-CCHHHHHHHHHHHHHHHHHHHhC---CccCCCCChHHEEEe
Confidence            44555544444345678999999999998776544332 34555889999999999999998   899999999999998


Q ss_pred             CCC----CCeEeeeeceEEeCCCCcceeceeeecccccCchhHHH------HHHHhcCCCcc-eeecccccCCCCCCHHH
Q 045577          265 AEI----NPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELLQ------AWKLWSEGDPM-EIIDEQTKMKGPFSADE  333 (392)
Q Consensus       265 ~~~----~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~~------~~diws~G~v~-~~ld~~~~~~~~~~~~~  333 (392)
                      .++    .+||+|||++.......  ......|++.|+| ||...      +.|+|+.|+++ +++.+..++.+....+.
T Consensus       143 ~~~~~~~~~kl~dfg~~~~~~~~~--~~~~~~~~~~y~a-PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~  219 (283)
T 3bhy_A          143 DKNVPNPRIKLIDFGIAHKIEAGN--EFKNIFGTPEFVA-PEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQET  219 (283)
T ss_dssp             CSSSSSCCEEECCCTTCEECC----------CCCGGGCC-HHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHH
T ss_pred             cCCCCCCceEEEecccceeccCCC--cccccCCCcCccC-cceecCCCCCcchhhhhHHHHHHHHHHCCCCCCCcchHHH
Confidence            876    79999999998764322  2233568999999 77653      78999999876 55555444332211111


Q ss_pred             -------------------HHHHHHHHHhhcccCcCCCCCHHHHHH
Q 045577          334 -------------------LVKCIEVGLLCVQQRIEDWPTMSSVLT  360 (392)
Q Consensus       334 -------------------~~~~~~i~~~Cl~~dp~~RPsm~eVv~  360 (392)
                                         ...+.+++..|++.||++||++.++++
T Consensus       220 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~  265 (283)
T 3bhy_A          220 LTNISAVNYDFDEEYFSNTSELAKDFIRRLLVKDPKRRMTIAQSLE  265 (283)
T ss_dssp             HHHHHTTCCCCCHHHHTTCCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred             HHHhHhcccCCcchhcccCCHHHHHHHHHHccCCHhHCcCHHHHHh
Confidence                               124667888999999999999999986

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*

Probab=99.81  E-value=6.6e-21  Score=177.24  Aligned_cols=162  Identities=20%  Similarity=0.210  Sum_probs=121.7

Q ss_pred             CCeeEEecCccCCCcChhhhhhh-ccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEcCCCCCeEeeeece
Q 045577          199 GEVFLMFEGIKLPDKSEFTCEFE-CSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEINPNISDFGPA  277 (392)
Q Consensus       199 ~~~~lv~e~~~~~~l~~~~~~~~-~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~~~~~~kl~DFGla  277 (392)
                      ...|++|||++++++.....+.. .......+..++.|++.||.|||+.   +|+||||||+||+++.++.+||+|||++
T Consensus        93 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~  169 (284)
T 2a19_B           93 KCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSK---KLINRDLKPSNIFLVDTKQVKIGDFGLV  169 (284)
T ss_dssp             EEEEEEECCCCSCBHHHHHHHGGGSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECCCTTC
T ss_pred             ceEEEEEeccCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeccCCHHHEEEcCCCCEEECcchhh
Confidence            45799999999999987654332 2334555789999999999999998   8999999999999999999999999999


Q ss_pred             EEeCCCCcceeceeeecccccCchhHH------HHHHHhcCCCcc-eeecccccC-----------CCCCCHHHHHHHHH
Q 045577          278 RIFGDQTEEVTGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIIDEQTKM-----------KGPFSADELVKCIE  339 (392)
Q Consensus       278 ~~~~~~~~~~~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld~~~~~-----------~~~~~~~~~~~~~~  339 (392)
                      +.......  .....|++.|+| ||..      .+.|+|+.|+++ +++.+...+           ....+......+.+
T Consensus       170 ~~~~~~~~--~~~~~~~~~y~a-PE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  246 (284)
T 2a19_B          170 TSLKNDGK--RTRSKGTLRYMS-PEQISSQDYGKEVDLYALGLILAELLHVCDTAFETSKFFTDLRDGIISDIFDKKEKT  246 (284)
T ss_dssp             EESSCCSC--CCCCCSCCTTSC-HHHHHCSCCCTHHHHHHHHHHHHHHHSCCSSHHHHHHHHHHHHTTCCCTTSCHHHHH
T ss_pred             eecccccc--ccccCCcccccC-hhhhccCCCcchhhhHHHHHHHHHHHhcCCcchhHHHHHHHhhcccccccCCHHHHH
Confidence            88653221  223568999999 7765      378999999876 344331111           00011111224556


Q ss_pred             HHHhhcccCcCCCCCHHHHHHHHccCC
Q 045577          340 VGLLCVQQRIEDWPTMSSVLTMLSNES  366 (392)
Q Consensus       340 i~~~Cl~~dp~~RPsm~eVv~~L~~~~  366 (392)
                      ++..|++.||++||++.++++.|+...
T Consensus       247 li~~~l~~dp~~Rps~~e~l~~l~~~~  273 (284)
T 2a19_B          247 LLQKLLSKKPEDRPNTSEILRTLTVWK  273 (284)
T ss_dssp             HHHHHTCSSGGGSCCHHHHHHHHHHHT
T ss_pred             HHHHHccCChhhCcCHHHHHHHHHHHh
Confidence            778999999999999999999998763

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...

Probab=99.81  E-value=1.9e-20  Score=181.32  Aligned_cols=170  Identities=19%  Similarity=0.282  Sum_probs=123.5

Q ss_pred             CCCccccccCcCC-----CCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccc
Q 045577          185 SGGCKRNWEADCG-----DGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTS  259 (392)
Q Consensus       185 s~GCvR~~~l~C~-----~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~  259 (392)
                      |++.++.......     ....|++|||+.+ ++......  .......+..++.|++.||.|||+.   +|+||||||+
T Consensus        84 h~niv~~~~~~~~~~~~~~~~~~iv~e~~~~-~L~~~l~~--~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~  157 (364)
T 3qyz_A           84 HENIIGINDIIRAPTIEQMKDVYIVQDLMET-DLYKLLKT--QHLSNDHICYFLYQILRGLKYIHSA---NVLHRDLKPS  157 (364)
T ss_dssp             CTTBCCCCEEECCSSTTTCCCEEEEEECCSE-EHHHHHHH--CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGG
T ss_pred             CCCCccceeEEecCCccccceEEEEEcccCc-CHHHHHHh--CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCChH
Confidence            5555555443211     2468999999985 55443322  1234455788999999999999998   8999999999


Q ss_pred             eeEEcCCCCCeEeeeeceEEeCCCCc--ceeceeeecccccCchhHH-------HHHHHhcCCCcc-eeecccccCCCCC
Q 045577          260 NVLLDAEINPNISDFGPARIFGDQTE--EVTGRVIGTQTLKTVPELL-------QAWKLWSEGDPM-EIIDEQTKMKGPF  329 (392)
Q Consensus       260 NIll~~~~~~kl~DFGla~~~~~~~~--~~~~~~~gt~~y~a~~~~~-------~~~diws~G~v~-~~ld~~~~~~~~~  329 (392)
                      ||+++.++.+||+|||+++.......  .......||+.|+| ||+.       .+.|+|+.|+++ +++.+.+.+.+..
T Consensus       158 NIl~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~a-PE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~  236 (364)
T 3qyz_A          158 NLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRA-PEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH  236 (364)
T ss_dssp             GEEECTTCCEEECCCTTCEECCGGGCBCCTTCCCCSCGGGCC-HHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred             hEEECCCCCEEEEeCcceEecCCCCCccccccccccccCCCC-CHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCC
Confidence            99999999999999999988652211  11234579999999 7754       377999999876 5666655554332


Q ss_pred             CHHH----------------------------------------------HHHHHHHHHhhcccCcCCCCCHHHHHHH
Q 045577          330 SADE----------------------------------------------LVKCIEVGLLCVQQRIEDWPTMSSVLTM  361 (392)
Q Consensus       330 ~~~~----------------------------------------------~~~~~~i~~~Cl~~dp~~RPsm~eVv~~  361 (392)
                      ..+.                                              ...+.+++..|++.||++|||+.++++.
T Consensus       237 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h  314 (364)
T 3qyz_A          237 YLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAH  314 (364)
T ss_dssp             GGGHHHHHHHHHCSCCHHHHHTCCCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred             hHHHHHHHHHHhCCCCHHHHHHhhhhhHHHHHHhcCCccCCCHHHhCCCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence            2221                                              1245678889999999999999999874

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}

Probab=99.81  E-value=3.5e-21  Score=182.24  Aligned_cols=176  Identities=17%  Similarity=0.109  Sum_probs=121.9

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEc
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLD  264 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~  264 (392)
                      |++.++.......++..|++|||++++++.....+.. ......+..++.|++.||.|||+.   +|+||||||+||+++
T Consensus        93 hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~NIl~~  168 (309)
T 2h34_A           93 EPHVVPIHDFGEIDGQLYVDMRLINGVDLAAMLRRQG-PLAPPRAVAIVRQIGSALDAAHAA---GATHRDVKPENILVS  168 (309)
T ss_dssp             CTTBCCEEEEEEETTEEEEEEECCCCEEHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEC
T ss_pred             CCCeeEEEEEEeeCCeEEEEEEecCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHC---cCCcCCCChHHEEEc
Confidence            4555554444334567899999999988877554432 234455789999999999999998   899999999999999


Q ss_pred             CCCCCeEeeeeceEEeCCCCcceeceeeecccccCchhHH------HHHHHhcCCCcc-eeecccccCCCCCC-------
Q 045577          265 AEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIIDEQTKMKGPFS-------  330 (392)
Q Consensus       265 ~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld~~~~~~~~~~-------  330 (392)
                      .++.+||+|||++...............|++.|+| ||..      ...|+|+.|+++ +++.+..++.....       
T Consensus       169 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~a-PE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~  247 (309)
T 2h34_A          169 ADDFAYLVDFGIASATTDEKLTQLGNTVGTLYYMA-PERFSESHATYRADIYALTCVLYECLTGSPPYQGDQLSVMGAHI  247 (309)
T ss_dssp             TTSCEEECSCCC----------------CCGGGCC-GGGTCC----CCCHHHHHHHHHHHHHHSSCSSCSCHHHHHHHHH
T ss_pred             CCCCEEEecCccCccccccccccccccCCCcCccC-HHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCCchHHHHHHHh
Confidence            99999999999998765332223334678999999 6644      356999999876 45555333322110       


Q ss_pred             -----------HHHHHHHHHHHHhhcccCcCCCC-CHHHHHHHHccC
Q 045577          331 -----------ADELVKCIEVGLLCVQQRIEDWP-TMSSVLTMLSNE  365 (392)
Q Consensus       331 -----------~~~~~~~~~i~~~Cl~~dp~~RP-sm~eVv~~L~~~  365 (392)
                                 ......+.+++..|++.||++|| +++++++.|+..
T Consensus       248 ~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rp~s~~~l~~~l~~~  294 (309)
T 2h34_A          248 NQAIPRPSTVRPGIPVAFDAVIARGMAKNPEDRYVTCGDLSAAAHAA  294 (309)
T ss_dssp             HSCCCCGGGTSTTCCTHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHT
T ss_pred             ccCCCCccccCCCCCHHHHHHHHHhccCCHHHHHHhHHHHHHHHHHH
Confidence                       11112456788899999999999 999999999876

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*

Probab=99.81  E-value=9.5e-21  Score=175.70  Aligned_cols=170  Identities=17%  Similarity=0.247  Sum_probs=119.0

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEc
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLD  264 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~  264 (392)
                      |++.++........+..|++|||++++++.....+... .....+..++.|++.||.|||+.   +++|+||||+||+++
T Consensus        70 h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~  145 (276)
T 2h6d_A           70 HPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGR-VEEMEARRLFQQILSAVDYCHRH---MVVHRDLKPENVLLD  145 (276)
T ss_dssp             CTTBCCEEEEEECSSEEEEEEECCCSCBHHHHHHHHCS-CCHHHHHHHHHHHHHHHHHHHHH---CSSCCCCCGGGEEEC
T ss_pred             CCCEeEEEEEEecCCeEEEEEeccCCCcHHHHHhccCC-CCHHHHHHHHHHHHHHHHHHHHC---CCccCCCChhhEEEC
Confidence            55555555544445678999999999988776554433 34445789999999999999998   899999999999999


Q ss_pred             CCCCCeEeeeeceEEeCCCCcceeceeeecccccCchhH-------HHHHHHhcCCCcc-eeecccccCCCCCCHH----
Q 045577          265 AEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPEL-------LQAWKLWSEGDPM-EIIDEQTKMKGPFSAD----  332 (392)
Q Consensus       265 ~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~-------~~~~diws~G~v~-~~ld~~~~~~~~~~~~----  332 (392)
                      .++.+||+|||++.......  ......|++.|+| ||.       ..+.|+|+.|+++ +++.+...+......+    
T Consensus       146 ~~~~~~l~dfg~~~~~~~~~--~~~~~~~~~~y~a-PE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~  222 (276)
T 2h6d_A          146 AHMNAKIADFGLSNMMSDGE--FLRTSCGSPNYAA-PEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKK  222 (276)
T ss_dssp             TTSCEEECCCCGGGCCCC---------------CC-TGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHH
T ss_pred             CCCCEEEeecccccccCCCc--ceecccCCccccC-HHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCCcHHHHHHH
Confidence            99999999999987654221  2233568899999 654       3578999999876 5555543333221111    


Q ss_pred             -----------HHHHHHHHHHhhcccCcCCCCCHHHHHHH
Q 045577          333 -----------ELVKCIEVGLLCVQQRIEDWPTMSSVLTM  361 (392)
Q Consensus       333 -----------~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~  361 (392)
                                 ....+.+++..|++.||++||++.++++.
T Consensus       223 ~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~~l~h  262 (276)
T 2h6d_A          223 IRGGVFYIPEYLNRSVATLLMHMLQVDPLKRATIKDIREH  262 (276)
T ss_dssp             HHHCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred             hhcCcccCchhcCHHHHHHHHHHccCChhhCCCHHHHHhC
Confidence                       12345678889999999999999999874

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*

Probab=99.81  E-value=6.2e-21  Score=189.41  Aligned_cols=171  Identities=20%  Similarity=0.255  Sum_probs=116.7

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhccc------cchhhhhHHHHHHHhhhhcCcCCCCceeeccccc
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSK------YSSYVTNILYGIARVILYLPEDSRLEIIHRDHKT  258 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~~------~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp  258 (392)
                      |++.++.......++..|++|||+. +++...........      ....+..++.||+.||.|||+.   +|+||||||
T Consensus        68 HpnIv~~~~~~~~~~~~~lv~E~~~-gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDLkp  143 (434)
T 2rio_A           68 HPNVIRYYCSETTDRFLYIALELCN-LNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSL---KIIHRDLKP  143 (434)
T ss_dssp             STTBCCEEEEEECSSEEEEEECCCS-EEHHHHHHTC------------CCHHHHHHHHHHHHHHHHHT---TEECCCCSG
T ss_pred             CCCcCeEEEEEecCCeEEEEEecCC-CCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHHC---CccccCCCh
Confidence            5566655444334567899999997 46665443322111      2223577999999999999998   899999999


Q ss_pred             ceeEEcCC-------------CCCeEeeeeceEEeCCCCcc---eeceeeecccccCchhHH-------------HHHHH
Q 045577          259 SNVLLDAE-------------INPNISDFGPARIFGDQTEE---VTGRVIGTQTLKTVPELL-------------QAWKL  309 (392)
Q Consensus       259 ~NIll~~~-------------~~~kl~DFGla~~~~~~~~~---~~~~~~gt~~y~a~~~~~-------------~~~di  309 (392)
                      +||+++.+             +.+||+|||+++........   ......||+.|+| ||+.             .+.|+
T Consensus       144 ~NILl~~~~~~~~~~~~~~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~a-PE~~~~~~~~~~~~~~~~~~Di  222 (434)
T 2rio_A          144 QNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRA-PELLEESNNLQTKRRLTRSIDI  222 (434)
T ss_dssp             GGEEEECCHHHHSCCTTCCCSCEEEECCCTTCEECCC--------------CCTTSC-HHHHSCCCTTSCCCCCCTHHHH
T ss_pred             HhEEEecCcccccccccCCCceEEEEcccccceecCCCCccceeeecCCCCCCCccC-HHHhccccccccccCcchhhhh
Confidence            99999754             47999999999987532211   2234679999999 7765             36899


Q ss_pred             hcCCCcc-eeec-ccccCCCCC--------------------CHHHHHHHHHHHHhhcccCcCCCCCHHHHHH
Q 045577          310 WSEGDPM-EIID-EQTKMKGPF--------------------SADELVKCIEVGLLCVQQRIEDWPTMSSVLT  360 (392)
Q Consensus       310 ws~G~v~-~~ld-~~~~~~~~~--------------------~~~~~~~~~~i~~~Cl~~dp~~RPsm~eVv~  360 (392)
                      |+.|+++ +++. +..++....                    .......+.+++..|++.||++||++.+|++
T Consensus       223 wSlG~il~ellt~g~~Pf~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~  295 (434)
T 2rio_A          223 FSMGCVFYYILSKGKHPFGDKYSRESNIIRGIFSLDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLR  295 (434)
T ss_dssp             HHHHHHHHHHHTTSCCTTCSTTTHHHHHHHTCCCCCCCTTCCCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             HhHHHHHHHHHhCCCCCCCCchhhHHHHhcCCCCcccccccccccchHHHHHHHHHHhhCChhhCCCHHHHHh
Confidence            9999987 4565 433332221                    1123356778889999999999999999985

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...

Probab=99.81  E-value=1.6e-20  Score=178.80  Aligned_cols=167  Identities=19%  Similarity=0.207  Sum_probs=121.8

Q ss_pred             CCCccccccCcCC--CCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeE
Q 045577          185 SGGCKRNWEADCG--DGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVL  262 (392)
Q Consensus       185 s~GCvR~~~l~C~--~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIl  262 (392)
                      |++.++.......  ....+++|||+.++++......    .....+..++.|++.||.|||+.   +|+||||||+||+
T Consensus        90 ~~~i~~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~----~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil  162 (330)
T 3nsz_A           90 GPNIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQT----LTDYDIRFYMYEILKALDYCHSM---GIMHRDVKPHNVM  162 (330)
T ss_dssp             STTBCCEEEEEECTTTCCEEEEEECCCCCCHHHHGGG----CCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEE
T ss_pred             CCCEEEeeeeeccCCCCceEEEEeccCchhHHHHHHh----CCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEE
Confidence            4444444443322  4568999999999988664422    33445788999999999999998   8999999999999


Q ss_pred             EcCCC-CCeEeeeeceEEeCCCCcceeceeeecccccCchhHH-------HHHHHhcCCCcc-eeecccccCCCCCCH-H
Q 045577          263 LDAEI-NPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELL-------QAWKLWSEGDPM-EIIDEQTKMKGPFSA-D  332 (392)
Q Consensus       263 l~~~~-~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~-------~~~diws~G~v~-~~ld~~~~~~~~~~~-~  332 (392)
                      ++.++ .+||+|||+++.......  .....|+..|+| ||+.       .+.|+|+.|+++ +++.+..++...... +
T Consensus       163 ~~~~~~~~kl~Dfg~a~~~~~~~~--~~~~~~~~~y~a-PE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~~~~~~~  239 (330)
T 3nsz_A          163 IDHEHRKLRLIDWGLAEFYHPGQE--YNVRVASRYFKG-PELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYD  239 (330)
T ss_dssp             EETTTTEEEECCCTTCEECCTTCC--CCSCCSCGGGCC-HHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHH
T ss_pred             EcCCCCEEEEEeCCCceEcCCCCc--cccccccccccC-hhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcccCCchHH
Confidence            99776 799999999987653222  233578899999 6654       378999999976 555554444221111 0


Q ss_pred             ----------------------------------------------------HHHHHHHHHHhhcccCcCCCCCHHHHHH
Q 045577          333 ----------------------------------------------------ELVKCIEVGLLCVQQRIEDWPTMSSVLT  360 (392)
Q Consensus       333 ----------------------------------------------------~~~~~~~i~~~Cl~~dp~~RPsm~eVv~  360 (392)
                                                                          ....+.+++..|++.||++|||+.++++
T Consensus       240 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~  319 (330)
T 3nsz_A          240 QLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAME  319 (330)
T ss_dssp             HHHHHHHHHCHHHHHHHHHHTTCCCCTHHHHHHCCCCCCCGGGGCCTTTGGGCCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred             HHHHHHHhcCCchhhhHHHHhccccccchhhhhhhccccchhhhccccccccCCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence                                                                1234567888999999999999999986


Q ss_pred             H
Q 045577          361 M  361 (392)
Q Consensus       361 ~  361 (392)
                      .
T Consensus       320 h  320 (330)
T 3nsz_A          320 H  320 (330)
T ss_dssp             S
T ss_pred             C
Confidence            3

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...

Probab=99.81  E-value=3.9e-21  Score=185.71  Aligned_cols=169  Identities=19%  Similarity=0.275  Sum_probs=122.5

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEc
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLD  264 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~  264 (392)
                      |++.++.......++..|++|||++++++.....+... .....+..++.|++.||.|||+.+  +|+||||||+||+++
T Consensus        90 h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~-~~~~~~~~i~~~i~~~l~~lh~~~--~i~H~dlkp~Nil~~  166 (360)
T 3eqc_A           90 SPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR-IPEQILGKVSIAVIKGLTYLREKH--KIMHRDVKPSNILVN  166 (360)
T ss_dssp             CTTBCCEEEEEEETTEEEEEECCCTTCBHHHHHHHHSS-CCHHHHHHHHHHHHHHHHHHHHHH--CCCCSCCSGGGEEEC
T ss_pred             CCCEEEEeEEEEECCEEEEEEECCCCCCHHHHHHHcCC-CCHHHHHHHHHHHHHHHHHHHHhC--CEEcCCccHHHEEEC
Confidence            55555554444445678999999999999776544332 344557889999999999999842  699999999999999


Q ss_pred             CCCCCeEeeeeceEEeCCCCcceeceeeecccccCchhHH------HHHHHhcCCCcc-eeecccccCCCCCCHH-----
Q 045577          265 AEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIIDEQTKMKGPFSAD-----  332 (392)
Q Consensus       265 ~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld~~~~~~~~~~~~-----  332 (392)
                      .++.+||+|||+++....   .......||+.|+| ||+.      .+.|+|+.|+++ +++.+..++......+     
T Consensus       167 ~~~~~kl~Dfg~~~~~~~---~~~~~~~gt~~y~a-PE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~  242 (360)
T 3eqc_A          167 SRGEIKLCDFGVSGQLID---SMANSFVGTRSYMS-PERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMF  242 (360)
T ss_dssp             TTCCEEECCCCCCHHHHH---HC----CCCCTTCC-HHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSSCCCHHHHHHHH
T ss_pred             CCCCEEEEECCCCccccc---ccccCCCCCCCeEC-HHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHh
Confidence            999999999999865421   12233578999999 7764      478999999876 5555543332211100     


Q ss_pred             ------------------------------------------------------HHHHHHHHHHhhcccCcCCCCCHHHH
Q 045577          333 ------------------------------------------------------ELVKCIEVGLLCVQQRIEDWPTMSSV  358 (392)
Q Consensus       333 ------------------------------------------------------~~~~~~~i~~~Cl~~dp~~RPsm~eV  358 (392)
                                                                            ....+.+++..|++.||++|||+.++
T Consensus       243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~el  322 (360)
T 3eqc_A          243 GCQVEGDAAETPPRPRTPGRPLNKFGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQL  322 (360)
T ss_dssp             C------------------------------CCCHHHHHHHHHHSCCCCCCTTTSCHHHHHHHHHHHCSSTTTSCCHHHH
T ss_pred             cccccccCCCCCCCcccCCCcccccccCCCCcccchhhhhHHhccCCCCCCcccccHHHHHHHHHHhhcChhhCCCHHHH
Confidence                                                                  11245678889999999999999998


Q ss_pred             HH
Q 045577          359 LT  360 (392)
Q Consensus       359 v~  360 (392)
                      ++
T Consensus       323 l~  324 (360)
T 3eqc_A          323 MV  324 (360)
T ss_dssp             HT
T ss_pred             hh
Confidence            86

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*

Probab=99.81  E-value=9.8e-21  Score=190.57  Aligned_cols=170  Identities=18%  Similarity=0.188  Sum_probs=126.0

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEc
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLD  264 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~  264 (392)
                      |++.++........+..|++|||+.++++.....+... .....+..++.|++.||.|||+.   +|+||||||+||+++
T Consensus        80 hpniv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~-~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~Nil~~  155 (486)
T 3mwu_A           80 HPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKR-FSEHDAARIIKQVFSGITYMHKH---NIVHRDLKPENILLE  155 (486)
T ss_dssp             CTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHHHSS-CCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEES
T ss_pred             CCCcCeEEEEEEcCCEEEEEEEcCCCCcHHHHHHhcCC-CCHHHHHHHHHHHHHHHHHHHHC---CeEeccCchHHEEEe
Confidence            56666655554445678999999999998776554432 34455889999999999999998   899999999999995


Q ss_pred             ---CCCCCeEeeeeceEEeCCCCcceeceeeecccccCchhHH-----HHHHHhcCCCcc-eeecccccCCCCCCHHH--
Q 045577          265 ---AEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELL-----QAWKLWSEGDPM-EIIDEQTKMKGPFSADE--  333 (392)
Q Consensus       265 ---~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~-----~~~diws~G~v~-~~ld~~~~~~~~~~~~~--  333 (392)
                         .++.+||+|||+++.....  .......||+.|+| ||+.     .+.|+|+.|+++ +++.+.+++.+....+.  
T Consensus       156 ~~~~~~~~kl~Dfg~a~~~~~~--~~~~~~~gt~~y~a-PE~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~  232 (486)
T 3mwu_A          156 SKEKDCDIKIIDFGLSTCFQQN--TKMKDRIGTAYYIA-PEVLRGTYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILK  232 (486)
T ss_dssp             SSSTTCCEEECSCSCTTTBCCC------CCTTGGGGCC-GGGGGSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHH
T ss_pred             cCCCCCCEEEEECCcCeECCCC--CccCCCcCCCCCCC-HHHhCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHH
Confidence               4567999999998755422  12233579999999 6654     478999999977 55665544433322111  


Q ss_pred             -----------------HHHHHHHHHhhcccCcCCCCCHHHHHHH
Q 045577          334 -----------------LVKCIEVGLLCVQQRIEDWPTMSSVLTM  361 (392)
Q Consensus       334 -----------------~~~~~~i~~~Cl~~dp~~RPsm~eVv~~  361 (392)
                                       ...+.+++..|++.+|.+|||+.++++.
T Consensus       233 ~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~~l~h  277 (486)
T 3mwu_A          233 RVETGKYAFDLPQWRTISDDAKDLIRKMLTFHPSLRITATQCLEH  277 (486)
T ss_dssp             HHHHTCCCSCSGGGGGSCHHHHHHHHHHTCSSTTTSCCHHHHHHC
T ss_pred             HHHhCCCCCCCcccCCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence                             2345678889999999999999999874

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...

Probab=99.81  E-value=7.4e-21  Score=188.09  Aligned_cols=155  Identities=21%  Similarity=0.249  Sum_probs=113.2

Q ss_pred             eeEEecCccCCCcChhhh--hhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEcCC-CCCeEeeeece
Q 045577          201 VFLMFEGIKLPDKSEFTC--EFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAE-INPNISDFGPA  277 (392)
Q Consensus       201 ~~lv~e~~~~~~l~~~~~--~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~~~-~~~kl~DFGla  277 (392)
                      .++||||+++........  +.........+..++.||++||.|||+.   +|+||||||+|||++.+ +.+||+|||++
T Consensus       128 ~~lv~e~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NILl~~~~~~~kl~DFG~a  204 (420)
T 1j1b_A          128 LNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSA  204 (420)
T ss_dssp             EEEEEECCCEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCSGGGEEEETTTTEEEECCCTTC
T ss_pred             EEeehhcccccHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChhhEEEeCCCCeEEeccchhh
Confidence            578999998633222111  1122234455788999999999999998   89999999999999965 56899999999


Q ss_pred             EEeCCCCcceeceeeecccccCchhHH-------HHHHHhcCCCcc-eeecccccCCCCCCHHH----------------
Q 045577          278 RIFGDQTEEVTGRVIGTQTLKTVPELL-------QAWKLWSEGDPM-EIIDEQTKMKGPFSADE----------------  333 (392)
Q Consensus       278 ~~~~~~~~~~~~~~~gt~~y~a~~~~~-------~~~diws~G~v~-~~ld~~~~~~~~~~~~~----------------  333 (392)
                      +.+.....  .....||+.|+| ||+.       .+.|+|+.|+++ +++.+++.+.+....++                
T Consensus       205 ~~~~~~~~--~~~~~~t~~y~a-PE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~l~~i~~~lg~p~~~~~  281 (420)
T 1j1b_A          205 KQLVRGEP--NVSYICSRYYRA-PELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQI  281 (420)
T ss_dssp             EECCTTCC--CCSCCSCTTSCC-HHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHH
T ss_pred             hhcccCCC--ceeeeeCCCcCC-HHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHH
Confidence            98653221  223578999999 7765       367999999977 66666555544332221                


Q ss_pred             ----------------------------HHHHHHHHHhhcccCcCCCCCHHHHHHH
Q 045577          334 ----------------------------LVKCIEVGLLCVQQRIEDWPTMSSVLTM  361 (392)
Q Consensus       334 ----------------------------~~~~~~i~~~Cl~~dp~~RPsm~eVv~~  361 (392)
                                                  ...+.+++.+|++.||++||++.|+++.
T Consensus       282 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~Li~~~L~~dP~~R~t~~e~l~h  337 (420)
T 1j1b_A          282 REMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAH  337 (420)
T ss_dssp             HHHCSCCCCCCCCCCCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred             HhhChhhhhhccCccCCCCHHHhcCCCCCHHHHHHHHHhccCChhHCCCHHHHhCC
Confidence                                        1346678889999999999999999853

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*

Probab=99.81  E-value=5.3e-21  Score=192.36  Aligned_cols=170  Identities=19%  Similarity=0.190  Sum_probs=127.7

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEE-
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLL-  263 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll-  263 (392)
                      |++.++........+..|++|||+.++++......... .....+..++.|++.||.|||+.   +|+||||||+||++ 
T Consensus        85 hpniv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~-~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~  160 (484)
T 3nyv_A           85 HPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKR-FSEVDAARIIRQVLSGITYMHKN---KIVHRDLKPENLLLE  160 (484)
T ss_dssp             CTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHTCSC-CBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEES
T ss_pred             CCCCCcEEEEEEeCCEEEEEEecCCCCCHHHHHHhcCC-CCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEEe
Confidence            66666666555556778999999999998765544332 34455788999999999999998   89999999999999 


Q ss_pred             --cCCCCCeEeeeeceEEeCCCCcceeceeeecccccCchhHHH-----HHHHhcCCCcc-eeecccccCCCCCCHH---
Q 045577          264 --DAEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELLQ-----AWKLWSEGDPM-EIIDEQTKMKGPFSAD---  332 (392)
Q Consensus       264 --~~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~~-----~~diws~G~v~-~~ld~~~~~~~~~~~~---  332 (392)
                        +.++.+||+|||+++......  ......||+.|+| ||+..     +.|+|+.|+++ +++.+.+++.+....+   
T Consensus       161 ~~~~~~~~kl~Dfg~a~~~~~~~--~~~~~~gt~~y~a-PE~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~  237 (484)
T 3nyv_A          161 SKSKDANIRIIDFGLSTHFEASK--KMKDKIGTAYYIA-PEVLHGTYDEKCDVWSTGVILYILLSGCPPFNGANEYDILK  237 (484)
T ss_dssp             SSSTTCCEEECCTTHHHHBCCCC--SHHHHTTGGGTCC-HHHHHTCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHH
T ss_pred             cCCCCCcEEEEeeeeeEEccccc--ccccCCCCccccC-ceeecCCCCCcceeHHHHHHHHHHHHCCCCCCCCCHHHHHH
Confidence              567889999999997654322  2223569999999 77653     78999999876 5555544443322111   


Q ss_pred             ----------------HHHHHHHHHHhhcccCcCCCCCHHHHHHH
Q 045577          333 ----------------ELVKCIEVGLLCVQQRIEDWPTMSSVLTM  361 (392)
Q Consensus       333 ----------------~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~  361 (392)
                                      ....+.+++..|++.+|++|||+.++++.
T Consensus       238 ~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~h  282 (484)
T 3nyv_A          238 KVEKGKYTFELPQWKKVSESAKDLIRKMLTYVPSMRISARDALDH  282 (484)
T ss_dssp             HHHHCCCCCCSGGGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred             HHHcCCCCCCCcccccCCHHHHHHHHHHCCCChhHCcCHHHHhhC
Confidence                            12346678889999999999999999853

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*

Probab=99.81  E-value=1.2e-20  Score=182.34  Aligned_cols=170  Identities=17%  Similarity=0.221  Sum_probs=115.9

Q ss_pred             CCCccccccCcC-----CCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccc
Q 045577          185 SGGCKRNWEADC-----GDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTS  259 (392)
Q Consensus       185 s~GCvR~~~l~C-----~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~  259 (392)
                      |++.++......     .....|++|||+.+ ++...............+..++.|++.||.|||+.   +|+||||||+
T Consensus        88 h~~iv~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~  163 (362)
T 3pg1_A           88 HPNILGLRDIFVHFEEPAMHKLYLVTELMRT-DLAQVIHDQRIVISPQHIQYFMYHILLGLHVLHEA---GVVHRDLHPG  163 (362)
T ss_dssp             CTTBCCCSEEEEECCTTTCCEEEEEEECCSE-EHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGG
T ss_pred             CcCccceeeeEEeccCCCcceEEEEEccCCC-CHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHC---cCEecCCChH
Confidence            555555544321     12357999999994 55444333333345556889999999999999998   8999999999


Q ss_pred             eeEEcCCCCCeEeeeeceEEeCCCCcceeceeeecccccCchhHH-------HHHHHhcCCCcc-eeecccccCCCCCCH
Q 045577          260 NVLLDAEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELL-------QAWKLWSEGDPM-EIIDEQTKMKGPFSA  331 (392)
Q Consensus       260 NIll~~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~-------~~~diws~G~v~-~~ld~~~~~~~~~~~  331 (392)
                      ||+++.++.+||+|||+++.....  .......||+.|+| ||..       .+.|+|+.|+++ +++.+...+.+....
T Consensus       164 NIl~~~~~~~kl~Dfg~~~~~~~~--~~~~~~~~t~~y~a-PE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~  240 (362)
T 3pg1_A          164 NILLADNNDITICDFNLAREDTAD--ANKTHYVTHRWYRA-PELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFY  240 (362)
T ss_dssp             GEEECTTCCEEECCTTC-----------------CGGGCC-HHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH
T ss_pred             HEEEcCCCCEEEEecCcccccccc--cccceecccceecC-cHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCCCCCHH
Confidence            999999999999999999764322  12233578999999 7754       368999999977 566654444433222


Q ss_pred             HHH-----------------------------------------------HHHHHHHHhhcccCcCCCCCHHHHHHH
Q 045577          332 DEL-----------------------------------------------VKCIEVGLLCVQQRIEDWPTMSSVLTM  361 (392)
Q Consensus       332 ~~~-----------------------------------------------~~~~~i~~~Cl~~dp~~RPsm~eVv~~  361 (392)
                      +..                                               ..+.+++..|++.||++|||+.++++.
T Consensus       241 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h  317 (362)
T 3pg1_A          241 NQLNKIVEVVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALRH  317 (362)
T ss_dssp             HHHHHHHHHHCCCCHHHHHHTSCHHHHHHTTTCCCCCCCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred             HHHHHHHHHcCCCChHHhhhccchhhhHHHHhhcccCChhhHHhhCCCCCHHHHHHHHHHhcCChhhCCCHHHHHcC
Confidence            111                                               235678889999999999999999874

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A

Probab=99.81  E-value=8.4e-21  Score=177.61  Aligned_cols=154  Identities=19%  Similarity=0.265  Sum_probs=117.0

Q ss_pred             CCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCc--eeecccccceeEEc-CCCCCeEeeee
Q 045577          199 GEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLE--IIHRDHKTSNVLLD-AEINPNISDFG  275 (392)
Q Consensus       199 ~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~--iiHrDlKp~NIll~-~~~~~kl~DFG  275 (392)
                      ...++||||++++++.....+.. ......+..++.|++.||.|||+.   +  ++||||||+||+++ .++.+||+|||
T Consensus       102 ~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH~~---~~~i~H~dikp~Nil~~~~~~~~kl~Dfg  177 (290)
T 1t4h_A          102 KCIVLVTELMTSGTLKTYLKRFK-VMKIKVLRSWCRQILKGLQFLHTR---TPPIIHRDLKCDNIFITGPTGSVKIGDLG  177 (290)
T ss_dssp             EEEEEEEECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHTS---SSCCCCSCCCGGGEEESSTTSCEEECCTT
T ss_pred             ceEEEEEEecCCCCHHHHHHHcc-CCCHHHHHHHHHHHHHHHHHHHcC---CCCEEECCCCHHHEEEECCCCCEEEeeCC
Confidence            44799999999999987654432 234455788999999999999997   6  99999999999997 78899999999


Q ss_pred             ceEEeCCCCcceeceeeecccccCchhHH-----HHHHHhcCCCcc-eeecccccCCCCCCHHH----------------
Q 045577          276 PARIFGDQTEEVTGRVIGTQTLKTVPELL-----QAWKLWSEGDPM-EIIDEQTKMKGPFSADE----------------  333 (392)
Q Consensus       276 la~~~~~~~~~~~~~~~gt~~y~a~~~~~-----~~~diws~G~v~-~~ld~~~~~~~~~~~~~----------------  333 (392)
                      ++......   ......|++.|+| ||..     .+.|+|+.|+++ +++.+..++........                
T Consensus       178 ~~~~~~~~---~~~~~~~t~~y~a-PE~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~  253 (290)
T 1t4h_A          178 LATLKRAS---FAKAVIGTPEFMA-PEMYEEKYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVKPASFDK  253 (290)
T ss_dssp             GGGGCCTT---SBEESCSSCCCCC-GGGGGTCCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHHTTTCCCGGGGG
T ss_pred             Cccccccc---ccccccCCcCcCC-HHHHhccCCCcchHHHHHHHHHHHHhCCCCCCCcCcHHHHHHHHhccCCccccCC
Confidence            98643321   2233568999999 6654     378999999876 55555444433222211                


Q ss_pred             --HHHHHHHHHhhcccCcCCCCCHHHHHH
Q 045577          334 --LVKCIEVGLLCVQQRIEDWPTMSSVLT  360 (392)
Q Consensus       334 --~~~~~~i~~~Cl~~dp~~RPsm~eVv~  360 (392)
                        ...+.+++..|++.||++||++.++++
T Consensus       254 ~~~~~l~~li~~~l~~dp~~Rps~~ell~  282 (290)
T 1t4h_A          254 VAIPEVKEIIEGCIRQNKDERYSIKDLLN  282 (290)
T ss_dssp             CCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             CCCHHHHHHHHHHccCChhhCCCHHHHhh
Confidence              135677888999999999999999986

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*

Probab=99.81  E-value=3.7e-21  Score=180.82  Aligned_cols=171  Identities=19%  Similarity=0.226  Sum_probs=121.0

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEc
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLD  264 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~  264 (392)
                      |++.++.......++..|++|||++++++.....+.........+..++.|++.||.|||+.   +++||||||+||+++
T Consensus        75 h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~  151 (302)
T 2j7t_A           75 HPYIVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHSK---RIIHRDLKAGNVLMT  151 (302)
T ss_dssp             CTTBCCEEEEEECC-CEEEEEECCTTEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEEC
T ss_pred             CCCEeeeeeeeeeCCeEEEEEEeCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCHHHEEEC
Confidence            55555554444445789999999999988765444333345556889999999999999998   899999999999999


Q ss_pred             CCCCCeEeeeeceEEeCCCCcceeceeeecccccCchhHHH-----------HHHHhcCCCcc-eeecccccCCCCCC--
Q 045577          265 AEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELLQ-----------AWKLWSEGDPM-EIIDEQTKMKGPFS--  330 (392)
Q Consensus       265 ~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~~-----------~~diws~G~v~-~~ld~~~~~~~~~~--  330 (392)
                      .++.+||+|||++...... ........|++.|+| ||...           +.|+|+.|+++ +++.+..++.....  
T Consensus       152 ~~~~~kl~Dfg~~~~~~~~-~~~~~~~~~~~~y~a-PE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~  229 (302)
T 2j7t_A          152 LEGDIRLADFGVSAKNLKT-LQKRDSFIGTPYWMA-PEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMR  229 (302)
T ss_dssp             TTSCEEECCCHHHHHHHHH-HHC-----CCGGGCC-HHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSCHHH
T ss_pred             CCCCEEEEECCCCcccccc-ccccccccCChhhcC-CeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCCHHH
Confidence            9999999999987532110 111223578999999 77652           68999999876 45444333222111  


Q ss_pred             ----------------HHHHHHHHHHHHhhcccCcCCCCCHHHHHH
Q 045577          331 ----------------ADELVKCIEVGLLCVQQRIEDWPTMSSVLT  360 (392)
Q Consensus       331 ----------------~~~~~~~~~i~~~Cl~~dp~~RPsm~eVv~  360 (392)
                                      ......+.+++..|++.||++||++.++++
T Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~  275 (302)
T 2j7t_A          230 VLLKIAKSDPPTLLTPSKWSVEFRDFLKIALDKNPETRPSAAQLLE  275 (302)
T ss_dssp             HHHHHHHSCCCCCSSGGGSCHHHHHHHHHHSCSCTTTSCCHHHHTT
T ss_pred             HHHHHhccCCcccCCccccCHHHHHHHHHHcccChhhCCCHHHHhc
Confidence                            111234667888999999999999999875

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*

Probab=99.81  E-value=1.4e-20  Score=183.60  Aligned_cols=121  Identities=23%  Similarity=0.361  Sum_probs=90.3

Q ss_pred             CCCeeEEecCccCCCcChhhhhhh-ccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEc--CCCCCeEeee
Q 045577          198 DGEVFLMFEGIKLPDKSEFTCEFE-CSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLD--AEINPNISDF  274 (392)
Q Consensus       198 ~~~~~lv~e~~~~~~l~~~~~~~~-~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~--~~~~~kl~DF  274 (392)
                      .+..|+||||+.+ ++........ .......+..++.|++.||.|||.+ ..+|+||||||+|||++  .++.+||+||
T Consensus       128 ~~~~~lv~e~~~~-~L~~~l~~~~~~~~~~~~~~~i~~qi~~al~~lH~~-~~~ivHrDlkp~NIll~~~~~~~~kL~DF  205 (382)
T 2vx3_A          128 RNHLCLVFEMLSY-NLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLATP-ELSIIHCDLKPENILLCNPKRSAIKIVDF  205 (382)
T ss_dssp             TTEEEEEEECCCC-BHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHTST-TTCEECCCCSGGGEEESSTTSCCEEECCC
T ss_pred             CCceEEEEecCCC-CHHHHHhhcCcCCCCHHHHHHHHHHHHHHHHHhccC-CCCEEcCCCCcccEEEecCCCCcEEEEec
Confidence            4678999999975 6655443322 2234555789999999999999952 23899999999999994  5778999999


Q ss_pred             eceEEeCCCCcceeceeeecccccCchhHH------HHHHHhcCCCcc-eeecccccC
Q 045577          275 GPARIFGDQTEEVTGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIIDEQTKM  325 (392)
Q Consensus       275 Gla~~~~~~~~~~~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld~~~~~  325 (392)
                      |+++.....    .....||+.|+| ||+.      .+.|+|+.|+++ +++.+.+++
T Consensus       206 G~a~~~~~~----~~~~~~t~~y~a-PE~~~~~~~~~~~DiwSlG~il~elltg~~pf  258 (382)
T 2vx3_A          206 GSSCQLGQR----IYQYIQSRFYRS-PEVLLGMPYDLAIDMWSLGCILVEMHTGEPLF  258 (382)
T ss_dssp             TTCEETTCC----CCSSCSCGGGCC-HHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSS
T ss_pred             cCceecccc----cccccCCccccC-hHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCC
Confidence            999876422    223578999999 7765      478999999876 555554443

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}

Probab=99.81  E-value=1.5e-20  Score=183.40  Aligned_cols=155  Identities=20%  Similarity=0.240  Sum_probs=115.5

Q ss_pred             CCeeEEecCccCCCcChhhh---hhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEc-CCCCCeEeee
Q 045577          199 GEVFLMFEGIKLPDKSEFTC---EFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLD-AEINPNISDF  274 (392)
Q Consensus       199 ~~~~lv~e~~~~~~l~~~~~---~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~-~~~~~kl~DF  274 (392)
                      ...++||||+++ ++.....   +.........+..++.|+++||.|||+.   +|+||||||+||+++ .++.+||+||
T Consensus       111 ~~~~lv~e~~~~-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---gi~H~Dikp~Nil~~~~~~~~kl~Df  186 (383)
T 3eb0_A          111 KYLNVIMEYVPD-TLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIHSL---GICHRDIKPQNLLVNSKDNTLKLCDF  186 (383)
T ss_dssp             CEEEEEECCCSE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCCGGGEEEETTTTEEEECCC
T ss_pred             eEEEEEEecCCc-cHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---cCccCccCHHHEEEcCCCCcEEEEEC
Confidence            347899999995 5443222   1222234555788999999999999998   899999999999998 6789999999


Q ss_pred             eceEEeCCCCcceeceeeecccccCchhHH-------HHHHHhcCCCcc-eeecccccCCCCCCHHHHH-----------
Q 045577          275 GPARIFGDQTEEVTGRVIGTQTLKTVPELL-------QAWKLWSEGDPM-EIIDEQTKMKGPFSADELV-----------  335 (392)
Q Consensus       275 Gla~~~~~~~~~~~~~~~gt~~y~a~~~~~-------~~~diws~G~v~-~~ld~~~~~~~~~~~~~~~-----------  335 (392)
                      |+++......  ......||+.|+| ||..       .+.|+|+.|+++ +++.+++.+.+....+.+.           
T Consensus       187 g~a~~~~~~~--~~~~~~~t~~y~a-PE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~g~p~~  263 (383)
T 3eb0_A          187 GSAKKLIPSE--PSVAYICSRFYRA-PELMLGATEYTPSIDLWSIGCVFGELILGKPLFSGETSIDQLVRIIQIMGTPTK  263 (383)
T ss_dssp             TTCEECCTTS--CCCCCCCCSSCCC-HHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCH
T ss_pred             CCCcccCCCC--CCcCcccCCCccC-HHHhcCCCCCCcchhhhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCH
Confidence            9999765322  2223568999999 7654       378999999976 5666655555443332222           


Q ss_pred             ---------------------------------HHHHHHHhhcccCcCCCCCHHHHHH
Q 045577          336 ---------------------------------KCIEVGLLCVQQRIEDWPTMSSVLT  360 (392)
Q Consensus       336 ---------------------------------~~~~i~~~Cl~~dp~~RPsm~eVv~  360 (392)
                                                       .+.+++..|++.||++|||+.|+++
T Consensus       264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~  321 (383)
T 3eb0_A          264 EQMIRMNPHYTEVRFPTLKAKDWRKILPEGTPSLAIDLLEQILRYEPDLRINPYEAMA  321 (383)
T ss_dssp             HHHHHHCTTC--CCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred             HHHHHhCcccccccCCccCcccHHhhCCCCCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence                                             2567888999999999999999984

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}

Probab=99.81  E-value=1.4e-20  Score=177.96  Aligned_cols=171  Identities=20%  Similarity=0.243  Sum_probs=125.1

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEc
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLD  264 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~  264 (392)
                      |++.++.......++..|++|||++++++...............+..++.|++.||.|||+.   +++|+||||+||+++
T Consensus        83 h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~  159 (314)
T 3com_A           83 SPHVVKYYGSYFKNTDLWIVMEYCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLHFM---RKIHRDIKAGNILLN  159 (314)
T ss_dssp             CTTBCCEEEEEEETTEEEEEEECCTTEEHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEC
T ss_pred             CCCCccEEEEEEeCCEEEEEeecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CCcCCCcCHHHEEEC
Confidence            44444443333335678999999999888775543333345555889999999999999998   899999999999999


Q ss_pred             CCCCCeEeeeeceEEeCCCCcceeceeeecccccCchhHH------HHHHHhcCCCcc-eeecccccCCCCCC-------
Q 045577          265 AEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIIDEQTKMKGPFS-------  330 (392)
Q Consensus       265 ~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld~~~~~~~~~~-------  330 (392)
                      .++.+||+|||++........ ......|++.|+| ||..      .+.|+|+.|+++ +++.+..++.....       
T Consensus       160 ~~~~~kl~dfg~~~~~~~~~~-~~~~~~~~~~y~a-PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~  237 (314)
T 3com_A          160 TEGHAKLADFGVAGQLTDTMA-KRNTVIGTPFWMA-PEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHPMRAIFMI  237 (314)
T ss_dssp             TTCCEEECCCTTCEECBTTBS-CBCCCCSCGGGCC-HHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHH
T ss_pred             CCCCEEEeecccchhhhhhcc-ccCccCCCCCccC-hhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCCCChHHHHHHH
Confidence            999999999999987653221 2233578999999 7764      368999999876 45555333322111       


Q ss_pred             -----------HHHHHHHHHHHHhhcccCcCCCCCHHHHHH
Q 045577          331 -----------ADELVKCIEVGLLCVQQRIEDWPTMSSVLT  360 (392)
Q Consensus       331 -----------~~~~~~~~~i~~~Cl~~dp~~RPsm~eVv~  360 (392)
                                 ......+.+++..|++.||.+||++.++++
T Consensus       238 ~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rpt~~~ll~  278 (314)
T 3com_A          238 PTNPPPTFRKPELWSDNFTDFVKQCLVKSPEQRATATQLLQ  278 (314)
T ss_dssp             HHSCCCCCSSGGGSCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred             hcCCCcccCCcccCCHHHHHHHHHHccCChhhCcCHHHHHh
Confidence                       111235667888999999999999999975

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}

Probab=99.80  E-value=1.1e-20  Score=182.15  Aligned_cols=155  Identities=20%  Similarity=0.238  Sum_probs=113.7

Q ss_pred             eeEEecCccCCCcChhh--hhhhccccchhhhhHHHHHHHhhhhcC--cCCCCceeecccccceeEEcC-CCCCeEeeee
Q 045577          201 VFLMFEGIKLPDKSEFT--CEFECSKYSSYVTNILYGIARVILYLP--EDSRLEIIHRDHKTSNVLLDA-EINPNISDFG  275 (392)
Q Consensus       201 ~~lv~e~~~~~~l~~~~--~~~~~~~~~~~~~~i~~~ia~gL~yLH--~~~~~~iiHrDlKp~NIll~~-~~~~kl~DFG  275 (392)
                      .+++|||++++......  ...........+..++.|++.||.|||  +.   +|+||||||+||+++. ++.+||+|||
T Consensus       101 ~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~---~ivH~Dlkp~NIll~~~~~~~kl~Dfg  177 (360)
T 3e3p_A          101 LNVVMEYVPDTLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPSV---NVCHRDIKPHNVLVNEADGTLKLCDFG  177 (360)
T ss_dssp             EEEEEECCSCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTSTTT---CCBCSCCCGGGEEEETTTTEEEECCCT
T ss_pred             EEEEeecccccHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhCCCC---CeecCcCCHHHEEEeCCCCcEEEeeCC
Confidence            78999999964332211  112222344557889999999999999  66   8999999999999996 8899999999


Q ss_pred             ceEEeCCCCcceeceeeecccccCchhHH-------HHHHHhcCCCcc-eeecccccCCCCCCHH---------------
Q 045577          276 PARIFGDQTEEVTGRVIGTQTLKTVPELL-------QAWKLWSEGDPM-EIIDEQTKMKGPFSAD---------------  332 (392)
Q Consensus       276 la~~~~~~~~~~~~~~~gt~~y~a~~~~~-------~~~diws~G~v~-~~ld~~~~~~~~~~~~---------------  332 (392)
                      +++......  ......||+.|+| ||+.       .+.|+|+.|+++ +++.+...+.+....+               
T Consensus       178 ~a~~~~~~~--~~~~~~gt~~y~a-PE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~  254 (360)
T 3e3p_A          178 SAKKLSPSE--PNVAYICSRYYRA-PELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLHEIVRVLGCPSRE  254 (360)
T ss_dssp             TCBCCCTTS--CCCSTTSCGGGCC-HHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHH
T ss_pred             CceecCCCC--CcccccCCcceeC-HHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCCChHHHHHHHHHHcCCCCHH
Confidence            998765322  1223468999999 7754       378999999976 5666654444332221               


Q ss_pred             --------------------------------HHHHHHHHHHhhcccCcCCCCCHHHHHHH
Q 045577          333 --------------------------------ELVKCIEVGLLCVQQRIEDWPTMSSVLTM  361 (392)
Q Consensus       333 --------------------------------~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~  361 (392)
                                                      ....+.+++..|++.||++|||+.++++.
T Consensus       255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h  315 (360)
T 3e3p_A          255 VLRKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALCH  315 (360)
T ss_dssp             HHHHHCTTCCCGGGGCCCCCCHHHHTTTCCCTTHHHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred             HHHhcccchhhccccccccCCcccccchhhccccHHHHHHHHHHhccCccccCCHHHHhcC
Confidence                                            12356678889999999999999999864

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*

Probab=99.80  E-value=1.6e-20  Score=176.85  Aligned_cols=170  Identities=21%  Similarity=0.254  Sum_probs=124.7

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEc
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLD  264 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~  264 (392)
                      |++.++.......++..|++|||++++++......  .......+..++.|++.||.|||+.   +++|+||||+||+++
T Consensus        79 h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~  153 (303)
T 3a7i_A           79 SPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEP--GPLDETQIATILREILKGLDYLHSE---KKIHRDIKAANVLLS  153 (303)
T ss_dssp             CTTBCCEEEEEEETTEEEEEEECCTTEEHHHHHTT--SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEC
T ss_pred             CCCEeEEEEEEecCCeEEEEEEeCCCCcHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCChheEEEC
Confidence            44444444433335678999999998888765432  2234555788999999999999998   899999999999999


Q ss_pred             CCCCCeEeeeeceEEeCCCCcceeceeeecccccCchhHH------HHHHHhcCCCcc-eeecccccCCCCCCH------
Q 045577          265 AEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIIDEQTKMKGPFSA------  331 (392)
Q Consensus       265 ~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld~~~~~~~~~~~------  331 (392)
                      .++.+||+|||++....... .......|++.|+| ||..      ...|+|+.|+++ +++.+...+......      
T Consensus       154 ~~~~~kl~Dfg~~~~~~~~~-~~~~~~~~~~~y~a-PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~  231 (303)
T 3a7i_A          154 EHGEVKLADFGVAGQLTDTQ-IKRNTFVGTPFWMA-PEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLI  231 (303)
T ss_dssp             TTSCEEECCCTTCEECBTTB-CCBCCCCSCGGGCC-HHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHH
T ss_pred             CCCCEEEeecccceecCccc-cccCccCCCcCccC-HHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCCcCHHHHHHHh
Confidence            99999999999998765322 12233578999999 7765      378999999876 455553333221111      


Q ss_pred             ----------HHHHHHHHHHHhhcccCcCCCCCHHHHHHH
Q 045577          332 ----------DELVKCIEVGLLCVQQRIEDWPTMSSVLTM  361 (392)
Q Consensus       332 ----------~~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~  361 (392)
                                .....+.+++..|++.+|++||++.++++.
T Consensus       232 ~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~  271 (303)
T 3a7i_A          232 PKNNPPTLEGNYSKPLKEFVEACLNKEPSFRPTAKELLKH  271 (303)
T ss_dssp             HHSCCCCCCSSCCHHHHHHHHHHCCSSGGGSCCHHHHTTC
T ss_pred             hcCCCCCCccccCHHHHHHHHHHcCCChhhCcCHHHHhhC
Confidence                      112246678889999999999999999864

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...

Probab=99.80  E-value=2.1e-20  Score=181.58  Aligned_cols=152  Identities=24%  Similarity=0.346  Sum_probs=105.3

Q ss_pred             CCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEcCCCCCeEeeeeceE
Q 045577          199 GEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEINPNISDFGPAR  278 (392)
Q Consensus       199 ~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~~~~~~kl~DFGla~  278 (392)
                      ...|+++|++. +++......  .......+..++.||++||.|||+.   +|+||||||+||+++.++.+||+|||+++
T Consensus       107 ~~~~lv~e~~~-~~L~~~~~~--~~l~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kL~DFG~a~  180 (367)
T 2fst_X          107 NDVYLVTHLMG-ADLNNIVKC--QKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR  180 (367)
T ss_dssp             CCCEEEEECCC-EECC-------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECC-----
T ss_pred             CeEEEEecccC-CCHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHhhEEECCCCCEEEeeccccc
Confidence            56899999994 566554322  2234555788999999999999998   89999999999999999999999999998


Q ss_pred             EeCCCCcceeceeeecccccCchhHHH-------HHHHhcCCCcc-eeecccccCCCCCCHHHH----------------
Q 045577          279 IFGDQTEEVTGRVIGTQTLKTVPELLQ-------AWKLWSEGDPM-EIIDEQTKMKGPFSADEL----------------  334 (392)
Q Consensus       279 ~~~~~~~~~~~~~~gt~~y~a~~~~~~-------~~diws~G~v~-~~ld~~~~~~~~~~~~~~----------------  334 (392)
                      .....    .....||+.|+| ||+..       +.|+|+.|+++ +++.+++.+.+....+.+                
T Consensus       181 ~~~~~----~~~~~~t~~y~a-PE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~p~~~~~~  255 (367)
T 2fst_X          181 HTADE----MTGYVATRWYRA-PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLK  255 (367)
T ss_dssp             --------------CCCTTCC-HHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHT
T ss_pred             ccccc----CCCcCcCcCccC-hHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHH
Confidence            75421    233578999999 77653       58999999977 666665555443322221                


Q ss_pred             ------------------------------HHHHHHHHhhcccCcCCCCCHHHHHHH
Q 045577          335 ------------------------------VKCIEVGLLCVQQRIEDWPTMSSVLTM  361 (392)
Q Consensus       335 ------------------------------~~~~~i~~~Cl~~dp~~RPsm~eVv~~  361 (392)
                                                    ..+.+++..|++.||++|||+.++++.
T Consensus       256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~t~~e~L~h  312 (367)
T 2fst_X          256 KISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH  312 (367)
T ss_dssp             TCCCHHHHHHHHTSCCCCCCCHHHHTTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred             HhhhHHHHHHHhccCCCCCCCHHHHCCCCCHHHHHHHHHhCCCCcccCcCHHHHhcC
Confidence                                          235668889999999999999999864

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}

Probab=99.80  E-value=1.1e-20  Score=179.77  Aligned_cols=158  Identities=20%  Similarity=0.278  Sum_probs=113.7

Q ss_pred             CCCeeEEecCccCCCcChhhhhhh-ccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEcCCCCCeEeeeec
Q 045577          198 DGEVFLMFEGIKLPDKSEFTCEFE-CSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEINPNISDFGP  276 (392)
Q Consensus       198 ~~~~~lv~e~~~~~~l~~~~~~~~-~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~~~~~~kl~DFGl  276 (392)
                      ++..|++|||++++++........ .......+..++.|++.||.|||+.   +++|+||||+||+++.++.+||+|||+
T Consensus        99 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~~kl~Dfg~  175 (326)
T 2x7f_A           99 DDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQH---KVIHRDIKGQNVLLTENAEVKLVDFGV  175 (326)
T ss_dssp             CCEEEEEEECCTTEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTCCEEECCCTT
T ss_pred             cceEEEEEEcCCCCcHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCcHHHEEEcCCCCEEEeeCcC
Confidence            356899999999988877554432 2334555788999999999999998   899999999999999999999999999


Q ss_pred             eEEeCCCCcceeceeeecccccCchhHHH-----------HHHHhcCCCcc-eeecccccCCCCCCHH------------
Q 045577          277 ARIFGDQTEEVTGRVIGTQTLKTVPELLQ-----------AWKLWSEGDPM-EIIDEQTKMKGPFSAD------------  332 (392)
Q Consensus       277 a~~~~~~~~~~~~~~~gt~~y~a~~~~~~-----------~~diws~G~v~-~~ld~~~~~~~~~~~~------------  332 (392)
                      +....... .......|++.|+| ||...           +.|+|+.|+++ +++.+...+.......            
T Consensus       176 ~~~~~~~~-~~~~~~~~~~~y~a-PE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~  253 (326)
T 2x7f_A          176 SAQLDRTV-GRRNTFIGTPYWMA-PEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIPRNPAPR  253 (326)
T ss_dssp             TC--------------CCGGGCC-HHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCCC
T ss_pred             ceecCcCc-cccccccCCccccC-hhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCCcHHHHHHHhhcCcccc
Confidence            87654221 12233578999999 77652           47999999876 5555543332221111            


Q ss_pred             -----HHHHHHHHHHhhcccCcCCCCCHHHHHH
Q 045577          333 -----ELVKCIEVGLLCVQQRIEDWPTMSSVLT  360 (392)
Q Consensus       333 -----~~~~~~~i~~~Cl~~dp~~RPsm~eVv~  360 (392)
                           ....+.+++..|++.||++||++.++++
T Consensus       254 ~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~  286 (326)
T 2x7f_A          254 LKSKKWSKKFQSFIESCLVKNHSQRPATEQLMK  286 (326)
T ss_dssp             CSCSCSCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred             CCccccCHHHHHHHHHHhccChhhCCCHHHHhh
Confidence                 1134667888999999999999999987

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...

Probab=99.80  E-value=1.4e-20  Score=182.89  Aligned_cols=153  Identities=21%  Similarity=0.269  Sum_probs=105.8

Q ss_pred             CCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEcCCCCCeEeeeeceE
Q 045577          199 GEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEINPNISDFGPAR  278 (392)
Q Consensus       199 ~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~~~~~~kl~DFGla~  278 (392)
                      ...|+||||++++ +.....   .......+..++.|++.||.|||+.   +|+||||||+||+++.++.+||+|||+++
T Consensus       103 ~~~~lv~e~~~~~-l~~~~~---~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~  175 (371)
T 2xrw_A          103 QDVYIVMELMDAN-LCQVIQ---MELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLAR  175 (371)
T ss_dssp             CEEEEEEECCSEE-HHHHHH---SCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECCCCC--
T ss_pred             cceEEEEEcCCCC-HHHHHh---hccCHHHHHHHHHHHHHHHHHHHHC---CeecccCCHHHEEEcCCCCEEEEEeeccc
Confidence            3679999999853 333221   1134445788999999999999998   89999999999999999999999999998


Q ss_pred             EeCCCCcceeceeeecccccCchhHH------HHHHHhcCCCcc-eeecccccCCCCCCH--------------------
Q 045577          279 IFGDQTEEVTGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIIDEQTKMKGPFSA--------------------  331 (392)
Q Consensus       279 ~~~~~~~~~~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld~~~~~~~~~~~--------------------  331 (392)
                      .....  .......||+.|+| ||+.      .+.|+|+.|+++ +++.+...+.+....                    
T Consensus       176 ~~~~~--~~~~~~~gt~~y~a-PE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~  252 (371)
T 2xrw_A          176 TAGTS--FMMTPYVVTRYYRA-PEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKK  252 (371)
T ss_dssp             ----------------CTTCC-HHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHC-CCCCCHHHHTT
T ss_pred             ccccc--cccCCceecCCccC-HHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHH
Confidence            75422  12234678999999 7765      368999999876 555554443322110                    


Q ss_pred             -------------------------------------HHHHHHHHHHHhhcccCcCCCCCHHHHHHH
Q 045577          332 -------------------------------------DELVKCIEVGLLCVQQRIEDWPTMSSVLTM  361 (392)
Q Consensus       332 -------------------------------------~~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~  361 (392)
                                                           .....+.+++..|++.||++|||+.++++.
T Consensus       253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~h  319 (371)
T 2xrw_A          253 LQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQH  319 (371)
T ss_dssp             SCHHHHHHHHSSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSGGGSCCHHHHHHS
T ss_pred             hhhHHHHHHhhCccccccchhhhcccccCcccccccccccHHHHHHHHHHCcCChhhCCCHHHHhCC
Confidence                                                 013456778889999999999999999874

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B

Probab=99.80  E-value=1.3e-20  Score=179.03  Aligned_cols=156  Identities=23%  Similarity=0.372  Sum_probs=116.2

Q ss_pred             CCeeEEecCccCCCcChhhhhhhc-cccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEcCCCCCeEeeeece
Q 045577          199 GEVFLMFEGIKLPDKSEFTCEFEC-SKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEINPNISDFGPA  277 (392)
Q Consensus       199 ~~~~lv~e~~~~~~l~~~~~~~~~-~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~~~~~~kl~DFGla  277 (392)
                      +..+++|||++ +++......... ......+..++.|++.||.|||+.   +|+||||||+||+++.++.+||+|||++
T Consensus        92 ~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---gi~H~dlkp~Nili~~~~~~kl~Dfg~~  167 (326)
T 1blx_A           92 TKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLA  167 (326)
T ss_dssp             EEEEEEEECCS-CBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECSCCSC
T ss_pred             ceEEEEEecCC-CCHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCCHHHeEEcCCCCEEEecCccc
Confidence            56899999998 466554433221 234555788999999999999998   8999999999999999999999999999


Q ss_pred             EEeCCCCcceeceeeecccccCchhHH------HHHHHhcCCCcc-eeecccccCCCCCCHHHH----------------
Q 045577          278 RIFGDQTEEVTGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIIDEQTKMKGPFSADEL----------------  334 (392)
Q Consensus       278 ~~~~~~~~~~~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld~~~~~~~~~~~~~~----------------  334 (392)
                      +.....  .......|+..|+| ||..      .+.|+|+.|+++ +++.+...+.+....+..                
T Consensus       168 ~~~~~~--~~~~~~~~~~~y~a-PE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~  244 (326)
T 1blx_A          168 RIYSFQ--MALTSVVVTLWYRA-PEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWP  244 (326)
T ss_dssp             CCCCGG--GGGCCCCCCCTTCC-HHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCGGGSC
T ss_pred             ccccCC--CCccccccccceeC-HHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCcccCc
Confidence            765421  12233578999999 7765      478999999876 555554444332222221                


Q ss_pred             --------------------------HHHHHHHHhhcccCcCCCCCHHHHHHH
Q 045577          335 --------------------------VKCIEVGLLCVQQRIEDWPTMSSVLTM  361 (392)
Q Consensus       335 --------------------------~~~~~i~~~Cl~~dp~~RPsm~eVv~~  361 (392)
                                                ..+.+++..|++.||++||++.++++.
T Consensus       245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h  297 (326)
T 1blx_A          245 RDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSH  297 (326)
T ss_dssp             TTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred             cccccchhhhcccCcchhhhccccCCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence                                      234567889999999999999999853

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}

Probab=99.80  E-value=1.8e-20  Score=175.34  Aligned_cols=172  Identities=19%  Similarity=0.234  Sum_probs=122.7

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhc--cccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeE
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFEC--SKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVL  262 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~--~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIl  262 (392)
                      |++.++........+..+++|||++++++.........  ......+..++.|++.||.|||+.   +++|+||||+||+
T Consensus        78 h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil  154 (295)
T 2clq_A           78 HKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDN---QIVHRDIKGDNVL  154 (295)
T ss_dssp             CTTBCCEEEEEEETTEEEEEEECCSEEEHHHHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEE
T ss_pred             CCCEeeEeeEEEeCCcEEEEEEeCCCCCHHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhC---CEEccCCChhhEE
Confidence            55555554444345678999999999888775543321  113444677899999999999998   8999999999999


Q ss_pred             EcC-CCCCeEeeeeceEEeCCCCcceeceeeecccccCchhHH--------HHHHHhcCCCcc-eeecccccCCC-----
Q 045577          263 LDA-EINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELL--------QAWKLWSEGDPM-EIIDEQTKMKG-----  327 (392)
Q Consensus       263 l~~-~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~--------~~~diws~G~v~-~~ld~~~~~~~-----  327 (392)
                      ++. ++.+||+|||+++...... .......|++.|+| ||..        ...|+|+.|+++ +++.+..++..     
T Consensus       155 ~~~~~~~~kl~Dfg~~~~~~~~~-~~~~~~~~~~~y~a-PE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~  232 (295)
T 2clq_A          155 INTYSGVLKISDFGTSKRLAGIN-PCTETFTGTLQYMA-PEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQ  232 (295)
T ss_dssp             EETTTCCEEECCTTTCEESCC------CCCCCCGGGCC-HHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSSHH
T ss_pred             EECCCCCEEEeecccccccCCCC-CcccccCCCccccC-hhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCCCchh
Confidence            987 8899999999998764321 12233578999999 6654        367999999876 45544333211     


Q ss_pred             -------------CCCHHHHHHHHHHHHhhcccCcCCCCCHHHHHHH
Q 045577          328 -------------PFSADELVKCIEVGLLCVQQRIEDWPTMSSVLTM  361 (392)
Q Consensus       328 -------------~~~~~~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~  361 (392)
                                   ..+......+.+++..|++.||++||++.++++.
T Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~  279 (295)
T 2clq_A          233 AAMFKVGMFKVHPEIPESMSAEAKAFILKCFEPDPDKRACANDLLVD  279 (295)
T ss_dssp             HHHHHHHHHCCCCCCCTTSCHHHHHHHHHTTCSSTTTSCCHHHHHTS
T ss_pred             HHHHhhccccccccccccCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence                         1111122356678889999999999999999853

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*

Probab=99.80  E-value=5e-21  Score=177.89  Aligned_cols=163  Identities=18%  Similarity=0.226  Sum_probs=119.5

Q ss_pred             CCCeeEEecCccCCCcChhhhhhhc---cccchhhhhHHHHHHHhhhhcCcCCCCc-----eeecccccceeEEcCCCCC
Q 045577          198 DGEVFLMFEGIKLPDKSEFTCEFEC---SKYSSYVTNILYGIARVILYLPEDSRLE-----IIHRDHKTSNVLLDAEINP  269 (392)
Q Consensus       198 ~~~~~lv~e~~~~~~l~~~~~~~~~---~~~~~~~~~i~~~ia~gL~yLH~~~~~~-----iiHrDlKp~NIll~~~~~~  269 (392)
                      ++..|++|||++++++.........   ......+..++.|++.||.|||+.   +     ++||||||+||+++.++.+
T Consensus        79 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~~~~~~ivH~dl~p~NIl~~~~~~~  155 (279)
T 2w5a_A           79 NTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRR---SDGGHTVLHRDLKPANVFLDGKQNV  155 (279)
T ss_dssp             GTEEEEEEECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHH---C------CCCCCSGGGEEECSSSCE
T ss_pred             CceEEEEEeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHhcc---cCCCCeeEEeccchhhEEEcCCCCE
Confidence            3568999999999888775543322   134555889999999999999997   6     9999999999999999999


Q ss_pred             eEeeeeceEEeCCCCcceeceeeecccccCchhHH------HHHHHhcCCCcc-eeecccccCCCCCC------------
Q 045577          270 NISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIIDEQTKMKGPFS------------  330 (392)
Q Consensus       270 kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld~~~~~~~~~~------------  330 (392)
                      ||+|||+++....... ......|++.|+| ||..      .+.|+|+.|+++ +++.+...+.....            
T Consensus       156 kl~dfg~~~~~~~~~~-~~~~~~~~~~y~a-PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~i~~~~~  233 (279)
T 2w5a_A          156 KLGDFGLARILNHDTS-FAKTFVGTPYYMS-PEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKF  233 (279)
T ss_dssp             EECCCCHHHHC---CH-HHHHHHSCCTTCC-HHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCC
T ss_pred             EEecCchheeeccccc-cccccCCCccccC-hHHhccCCCCchhhHHHHHHHHHHHHHCCCCCcccCHHHHHHHHhhccc
Confidence            9999999876542211 1223468899999 7765      478999999876 45555333322111            


Q ss_pred             ----HHHHHHHHHHHHhhcccCcCCCCCHHHHHHHHccC
Q 045577          331 ----ADELVKCIEVGLLCVQQRIEDWPTMSSVLTMLSNE  365 (392)
Q Consensus       331 ----~~~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~L~~~  365 (392)
                          ......+.+++..|++.+|++||++.+|++.+...
T Consensus       234 ~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~~~~~  272 (279)
T 2w5a_A          234 RRIPYRYSDELNEIITRMLNLKDYHRPSVEEILENPLIL  272 (279)
T ss_dssp             CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSTTCC
T ss_pred             ccCCcccCHHHHHHHHHHcCCCcccCCCHHHHHhChhhh
Confidence                11123566788899999999999999999877543

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...

Probab=99.80  E-value=2.6e-20  Score=177.22  Aligned_cols=169  Identities=20%  Similarity=0.301  Sum_probs=123.5

Q ss_pred             CCCccccccCcCCCCCeeEEecCccC-CCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEE
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKL-PDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLL  263 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~-~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll  263 (392)
                      +++.++........+..+++||++.. +++.....+.. ......+..++.|++.||.|||+.   +|+||||||+||++
T Consensus       107 ~~~i~~~~~~~~~~~~~~lv~e~~~~~~~L~~~l~~~~-~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll  182 (320)
T 3a99_A          107 FSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG-ALQEELARSFFWQVLEAVRHCHNC---GVLHRDIKDENILI  182 (320)
T ss_dssp             SCSBCCEEEEEECSSEEEEEEECCSSEEEHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEE
T ss_pred             CCCceEEEEEEecCCcEEEEEEcCCCCccHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHHHC---CcEeCCCCHHHEEE
Confidence            45555555544445678999999975 66665544332 234455788999999999999998   89999999999999


Q ss_pred             c-CCCCCeEeeeeceEEeCCCCcceeceeeecccccCchhHH-------HHHHHhcCCCcc-eeecccccCCCC------
Q 045577          264 D-AEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELL-------QAWKLWSEGDPM-EIIDEQTKMKGP------  328 (392)
Q Consensus       264 ~-~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~-------~~~diws~G~v~-~~ld~~~~~~~~------  328 (392)
                      + .++.+||+|||+++.....   ......||+.|+| ||+.       .+.|+|++|+++ +++.+..++...      
T Consensus       183 ~~~~~~~kL~Dfg~~~~~~~~---~~~~~~gt~~y~a-PE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~  258 (320)
T 3a99_A          183 DLNRGELKLIDFGSGALLKDT---VYTDFDGTRVYSP-PEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRG  258 (320)
T ss_dssp             ETTTTEEEECCCTTCEECCSS---CBCCCCSCGGGSC-HHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHHHHHC
T ss_pred             eCCCCCEEEeeCccccccccc---cccCCCCCccCCC-hHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCChhhhhcc
Confidence            9 7789999999999886532   2223568999999 7654       467999999877 555553332210      


Q ss_pred             ---CCHHHHHHHHHHHHhhcccCcCCCCCHHHHHHH
Q 045577          329 ---FSADELVKCIEVGLLCVQQRIEDWPTMSSVLTM  361 (392)
Q Consensus       329 ---~~~~~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~  361 (392)
                         ........+.+++.+|++.||++||++.++++.
T Consensus       259 ~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h  294 (320)
T 3a99_A          259 QVFFRQRVSSECQHLIRWCLALRPSDRPTFEEIQNH  294 (320)
T ss_dssp             CCCCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred             cccccccCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence               011112356778889999999999999999874

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*

Probab=99.80  E-value=5e-20  Score=177.08  Aligned_cols=156  Identities=22%  Similarity=0.301  Sum_probs=113.8

Q ss_pred             CCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEcCCCCCeEeeeeceE
Q 045577          199 GEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEINPNISDFGPAR  278 (392)
Q Consensus       199 ~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~~~~~~kl~DFGla~  278 (392)
                      +..|++|||+.+ ++......  .......+..++.|++.||.|||+.   +|+||||||+||+++.++.+||+|||+++
T Consensus        87 ~~~~lv~e~~~~-~L~~~~~~--~~~~~~~~~~~~~qi~~~L~~LH~~---~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~  160 (353)
T 2b9h_A           87 NEVYIIQELMQT-DLHRVIST--QMLSDDHIQYFIYQTLRAVKVLHGS---NVIHRDLKPSNLLINSNCDLKVCDFGLAR  160 (353)
T ss_dssp             CCEEEEECCCSE-EHHHHHHH--CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTCCEEECCCTTCE
T ss_pred             ceEEEEEeccCc-cHHHHHhh--cCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEEcCCCcEEEEeccccc
Confidence            568999999984 55443322  2234555788999999999999998   89999999999999999999999999998


Q ss_pred             EeCCCCcc---------eeceeeecccccCchhHH-------HHHHHhcCCCcc-eeecccccCCCCCCH----------
Q 045577          279 IFGDQTEE---------VTGRVIGTQTLKTVPELL-------QAWKLWSEGDPM-EIIDEQTKMKGPFSA----------  331 (392)
Q Consensus       279 ~~~~~~~~---------~~~~~~gt~~y~a~~~~~-------~~~diws~G~v~-~~ld~~~~~~~~~~~----------  331 (392)
                      ........         ......||+.|+| ||+.       .+.|+|+.|+++ +++.+.+.+.+....          
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~gt~~y~a-PE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~  239 (353)
T 2b9h_A          161 IIDESAADNSEPTGQQSGMVEFVATRWYRA-PEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGII  239 (353)
T ss_dssp             ECC----------------CCCCCCGGGCC-HHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHH
T ss_pred             ccccccccccCccccccchhhccccccccC-CeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHh
Confidence            76521111         1123468999999 7754       378999999876 455554333322111          


Q ss_pred             -------------------------------------HHHHHHHHHHHhhcccCcCCCCCHHHHHHH
Q 045577          332 -------------------------------------DELVKCIEVGLLCVQQRIEDWPTMSSVLTM  361 (392)
Q Consensus       332 -------------------------------------~~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~  361 (392)
                                                           .....+.+++..|++.||++||++.++++.
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h  306 (353)
T 2b9h_A          240 GTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEH  306 (353)
T ss_dssp             CCCCSTTTTTTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred             CCCchhccccccccchhhHHhhcccCCCCcchhhhcccCCHHHHHHHHHhcCcCcccCCCHHHHhcC
Confidence                                                 112245678889999999999999999874

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*

Probab=99.80  E-value=1.2e-20  Score=180.80  Aligned_cols=155  Identities=17%  Similarity=0.191  Sum_probs=103.0

Q ss_pred             CeeEEecCccCCCcChhhhhhhc-cccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEcC---CCCCeEeeee
Q 045577          200 EVFLMFEGIKLPDKSEFTCEFEC-SKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDA---EINPNISDFG  275 (392)
Q Consensus       200 ~~~lv~e~~~~~~l~~~~~~~~~-~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~~---~~~~kl~DFG  275 (392)
                      ..|++|||++++++.....+... ......+..++.|++.||.|||+.   +|+||||||+||+++.   ++.+||+|||
T Consensus       100 ~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~ql~~~l~~LH~~---~ivH~dlkp~NIll~~~~~~~~~kl~Dfg  176 (336)
T 3fhr_A          100 CLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSH---NIAHRDVKPENLLYTSKEKDAVLKLTDFG  176 (336)
T ss_dssp             EEEEEEECCTTEEHHHHHHTC-CCCCBHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSTTCCEEECCCT
T ss_pred             eEEEEEeccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEEecCCCceEEEeccc
Confidence            47999999999998776554332 235556899999999999999998   8999999999999976   4559999999


Q ss_pred             ceEEeCCCCcceeceeeecccccCchhHH------HHHHHhcCCCcc-eeecccccCCCCCC------------------
Q 045577          276 PARIFGDQTEEVTGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIIDEQTKMKGPFS------------------  330 (392)
Q Consensus       276 la~~~~~~~~~~~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld~~~~~~~~~~------------------  330 (392)
                      +++.....   ......||+.|+| ||+.      .+.|+|+.|+++ +++.+..++.....                  
T Consensus       177 ~~~~~~~~---~~~~~~~t~~y~a-PE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~  252 (336)
T 3fhr_A          177 FAKETTQN---ALQTPCYTPYYVA-PEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQYGF  252 (336)
T ss_dssp             TCEEC--------------------------CHHHHHHHHHHHHHHHHHHHHSSCCC---------------------CC
T ss_pred             cceecccc---ccccCCCCcCccC-hhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCccchhhhhhHHHhhhcccccc
Confidence            99875421   2233578999999 6644      478999999876 44444333211110                  


Q ss_pred             -----HHHHHHHHHHHHhhcccCcCCCCCHHHHHHH
Q 045577          331 -----ADELVKCIEVGLLCVQQRIEDWPTMSSVLTM  361 (392)
Q Consensus       331 -----~~~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~  361 (392)
                           ......+.+++..|++.||++||++.++++.
T Consensus       253 ~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h  288 (336)
T 3fhr_A          253 PNPEWSEVSEDAKQLIRLLLKTDPTERLTITQFMNH  288 (336)
T ss_dssp             CTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHS
T ss_pred             CchhhccCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence                 1123356678889999999999999999973

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*

Probab=99.79  E-value=2.1e-20  Score=177.70  Aligned_cols=168  Identities=20%  Similarity=0.247  Sum_probs=121.5

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEc
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLD  264 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~  264 (392)
                      |++.++..... ..++.|++|||++++++........ ......+..++.|++.||.|||+.   +|+||||||+||+++
T Consensus        74 h~~i~~~~~~~-~~~~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~  148 (322)
T 2ycf_A           74 HPCIIKIKNFF-DAEDYYIVLELMEGGELFDKVVGNK-RLKEATCKLYFYQMLLAVQYLHEN---GIIHRDLKPENVLLS  148 (322)
T ss_dssp             CTTBCCEEEEE-ESSSEEEEEECCTTEETHHHHSTTC-CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEES
T ss_pred             CCCCceEeeEE-cCCceEEEEecCCCCcHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEEe
Confidence            55555544332 2356899999999988866543332 234445788999999999999998   899999999999998


Q ss_pred             CCCC---CeEeeeeceEEeCCCCcceeceeeecccccCchhHH---------HHHHHhcCCCcc-eeecccccCCCCCC-
Q 045577          265 AEIN---PNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELL---------QAWKLWSEGDPM-EIIDEQTKMKGPFS-  330 (392)
Q Consensus       265 ~~~~---~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~---------~~~diws~G~v~-~~ld~~~~~~~~~~-  330 (392)
                      .++.   +||+|||+++......  ......||+.|+| ||+.         .+.|+|+.|+++ +++.+..++..... 
T Consensus       149 ~~~~~~~~kl~Dfg~~~~~~~~~--~~~~~~gt~~y~a-PE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~  225 (322)
T 2ycf_A          149 SQEEDCLIKITDFGHSKILGETS--LMRTLCGTPTYLA-PEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQ  225 (322)
T ss_dssp             SSSSSCCEEECCCTTCEECCCCH--HHHHHHSCCTTCC-HHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTCS
T ss_pred             cCCCCCeEEEccCccceeccccc--ccccccCCcCccC-chhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchH
Confidence            7654   9999999998764321  1223568999999 7764         278999999877 45555443322111 


Q ss_pred             ---------------HH----HHHHHHHHHHhhcccCcCCCCCHHHHHH
Q 045577          331 ---------------AD----ELVKCIEVGLLCVQQRIEDWPTMSSVLT  360 (392)
Q Consensus       331 ---------------~~----~~~~~~~i~~~Cl~~dp~~RPsm~eVv~  360 (392)
                                     .+    ....+.+++..|++.||++||++.++++
T Consensus       226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~~~l~  274 (322)
T 2ycf_A          226 VSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALR  274 (322)
T ss_dssp             SCHHHHHHHTCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred             HHHHHHHHhCccccCchhhhhcCHHHHHHHHHHcccCHhhCCCHHHHhh
Confidence                           00    1235677888999999999999999874

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}

Probab=99.79  E-value=3.8e-20  Score=175.09  Aligned_cols=170  Identities=20%  Similarity=0.257  Sum_probs=114.0

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEc
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLD  264 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~  264 (392)
                      |++.++.......++..|++|||+. +.+...............+..++.|++.||.|||+.+  +++||||||+||+++
T Consensus        83 h~~i~~~~~~~~~~~~~~lv~e~~~-~~~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~--~i~H~dlkp~Nil~~  159 (318)
T 2dyl_A           83 CPYIVQCFGTFITNTDVFIAMELMG-TCAEKLKKRMQGPIPERILGKMTVAIVKALYYLKEKH--GVIHRDVKPSNILLD  159 (318)
T ss_dssp             CTTBCCEEEEEECSSEEEEEECCCS-EEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHHH--CCCCCCCCGGGEEEC
T ss_pred             CCceeeEEEEEecCCcEEEEEeccC-CcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhhC--CEEeCCCCHHHEEEC
Confidence            5555555554444567899999993 3333222222223355557899999999999999832  799999999999999


Q ss_pred             CCCCCeEeeeeceEEeCCCCcceeceeeecccccCchhHHH-----------HHHHhcCCCcc-eeecccccCCCCCCHH
Q 045577          265 AEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELLQ-----------AWKLWSEGDPM-EIIDEQTKMKGPFSAD  332 (392)
Q Consensus       265 ~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~~-----------~~diws~G~v~-~~ld~~~~~~~~~~~~  332 (392)
                      .++.+||+|||+++......  ......|++.|+| ||...           +.|+|+.|+++ +++.+..++.......
T Consensus       160 ~~~~~kl~dfg~~~~~~~~~--~~~~~~~~~~y~a-PE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~  236 (318)
T 2dyl_A          160 ERGQIKLCDFGISGRLVDDK--AKDRSAGCAAYMA-PERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDF  236 (318)
T ss_dssp             TTSCEEECCCTTC----------------CCTTCC-HHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTCCSHH
T ss_pred             CCCCEEEEECCCchhccCCc--cccccCCCccccC-hhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCCCccH
Confidence            99999999999997654221  2233578999999 77652           67999999876 5555543333211111


Q ss_pred             -------------------HHHHHHHHHHhhcccCcCCCCCHHHHHH
Q 045577          333 -------------------ELVKCIEVGLLCVQQRIEDWPTMSSVLT  360 (392)
Q Consensus       333 -------------------~~~~~~~i~~~Cl~~dp~~RPsm~eVv~  360 (392)
                                         ....+.+++..|++.||.+||++.++++
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~  283 (318)
T 2dyl_A          237 EVLTKVLQEEPPLLPGHMGFSGDFQSFVKDCLTKDHRKRPKYNKLLE  283 (318)
T ss_dssp             HHHHHHHHSCCCCCCSSSCCCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred             HHHHHHhccCCCCCCccCCCCHHHHHHHHHHccCChhHCcCHHHHhh
Confidence                               1234667888999999999999999875

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}

Probab=99.79  E-value=4.2e-20  Score=174.70  Aligned_cols=169  Identities=18%  Similarity=0.261  Sum_probs=123.0

Q ss_pred             CCCccccccCcCCCCCeeEEecC-ccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEE
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEG-IKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLL  263 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~-~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll  263 (392)
                      |++.++........+..+++||+ +.++++.....+... .....+..++.|++.||.|||+.   +|+||||||+||++
T Consensus        97 h~~i~~~~~~~~~~~~~~~v~e~~~~~~~L~~~l~~~~~-~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~  172 (312)
T 2iwi_A           97 HPGVIRLLDWFETQEGFMLVLERPLPAQDLFDYITEKGP-LGEGPSRCFFGQVVAAIQHCHSR---GVVHRDIKDENILI  172 (312)
T ss_dssp             CSSBCCEEEEC-----CEEEEECCSSEEEHHHHHHHHCS-CCHHHHHHHHHHHHHHHHHHHHH---TEECCCCSGGGEEE
T ss_pred             CCCeeeEEEEEecCCeEEEEEEecCCCCCHHHHHHhcCC-CCHHHHHHHHHHHHHHHHHHHHC---CeeecCCChhhEEE
Confidence            66666666555445678999999 778888765544332 34455788999999999999998   89999999999999


Q ss_pred             c-CCCCCeEeeeeceEEeCCCCcceeceeeecccccCchhHH-------HHHHHhcCCCcc-eeecccccCCC-------
Q 045577          264 D-AEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELL-------QAWKLWSEGDPM-EIIDEQTKMKG-------  327 (392)
Q Consensus       264 ~-~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~-------~~~diws~G~v~-~~ld~~~~~~~-------  327 (392)
                      + .++.+||+|||+++......   .....|+..|+| ||+.       .+.|+|+.|+++ +++.+...+..       
T Consensus       173 ~~~~~~~kl~dfg~~~~~~~~~---~~~~~~~~~y~a-PE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~  248 (312)
T 2iwi_A          173 DLRRGCAKLIDFGSGALLHDEP---YTDFDGTRVYSP-PEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQEILEA  248 (312)
T ss_dssp             ETTTTEEEECCCSSCEECCSSC---BCCCCSCTTTSC-HHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHHHHHT
T ss_pred             eCCCCeEEEEEcchhhhcccCc---ccccCCcccccC-ceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCChHHHhhh
Confidence            9 78899999999998865322   233568999999 7754       368999999877 45554333211       


Q ss_pred             --CCCHHHHHHHHHHHHhhcccCcCCCCCHHHHHHH
Q 045577          328 --PFSADELVKCIEVGLLCVQQRIEDWPTMSSVLTM  361 (392)
Q Consensus       328 --~~~~~~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~  361 (392)
                        ..+......+.+++..|++.+|++||++.++++.
T Consensus       249 ~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~  284 (312)
T 2iwi_A          249 ELHFPAHVSPDCCALIRRCLAPKPSSRPSLEEILLD  284 (312)
T ss_dssp             CCCCCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHHS
T ss_pred             ccCCcccCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence              0111122356678889999999999999999974

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*

Probab=99.79  E-value=3.6e-20  Score=175.34  Aligned_cols=169  Identities=17%  Similarity=0.189  Sum_probs=113.8

Q ss_pred             CCccccccCcCCCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEcC
Q 045577          186 GGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDA  265 (392)
Q Consensus       186 ~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~~  265 (392)
                      ++.++.......++..|++||+ .++++.....+.. ......+..++.|++.||.|||+.   +|+||||||+||++++
T Consensus        88 ~~iv~~~~~~~~~~~~~lv~e~-~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~~  162 (313)
T 3cek_A           88 DKIIRLYDYEITDQYIYMVMEC-GNIDLNSWLKKKK-SIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIVD  162 (313)
T ss_dssp             TTBCCEEEEEECSSEEEEEECC-CSEEHHHHHHHCS-SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEET
T ss_pred             CceEEEEEEeecCCEEEEEEec-CCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCcccEEEEC
Confidence            4444444433345668999994 5566655444332 223445788999999999999998   8999999999999965


Q ss_pred             CCCCeEeeeeceEEeCCCC-cceeceeeecccccCchhHHH-----------------HHHHhcCCCcc-eeecccccCC
Q 045577          266 EINPNISDFGPARIFGDQT-EEVTGRVIGTQTLKTVPELLQ-----------------AWKLWSEGDPM-EIIDEQTKMK  326 (392)
Q Consensus       266 ~~~~kl~DFGla~~~~~~~-~~~~~~~~gt~~y~a~~~~~~-----------------~~diws~G~v~-~~ld~~~~~~  326 (392)
                       +.+||+|||+++...... ........|++.|+| ||...                 +.|+|+.|+++ +++.+..++.
T Consensus       163 -~~~kL~Dfg~~~~~~~~~~~~~~~~~~gt~~y~a-PE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~  240 (313)
T 3cek_A          163 -GMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMP-PEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQ  240 (313)
T ss_dssp             -TEEEECCCSSSCC--------------CCGGGCC-HHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTT
T ss_pred             -CeEEEeeccccccccCccccccccCCCCCCCcCC-HHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchh
Confidence             789999999998654221 222234578999999 77642                 68999999876 5555533332


Q ss_pred             CCCCH------------------HHHHHHHHHHHhhcccCcCCCCCHHHHHHH
Q 045577          327 GPFSA------------------DELVKCIEVGLLCVQQRIEDWPTMSSVLTM  361 (392)
Q Consensus       327 ~~~~~------------------~~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~  361 (392)
                      .....                  .....+.+++..|++.||++||++.++++.
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h  293 (313)
T 3cek_A          241 QIINQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAH  293 (313)
T ss_dssp             TCCSHHHHHHHHHCTTSCCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred             hHHHHHHHHHHHHhcccccCCcccchHHHHHHHHHHccCCcccCcCHHHHhcC
Confidence            21111                  112346677889999999999999999864

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A

Probab=99.78  E-value=2.9e-20  Score=175.22  Aligned_cols=173  Identities=16%  Similarity=0.162  Sum_probs=125.1

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEE-
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLL-  263 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll-  263 (392)
                      |++.++.......++..|++|||++++++.....+... .....+..++.|++.||.|||+.   +++||||||+||++ 
T Consensus        65 h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dikp~NIl~~  140 (304)
T 2jam_A           65 HENIVTLEDIYESTTHYYLVMQLVSGGELFDRILERGV-YTEKDASLVIQQVLSAVKYLHEN---GIVHRDLKPENLLYL  140 (304)
T ss_dssp             CTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHHHSC-CCHHHHHHHHHHHHHHHHHHHHT---TCCCCSCCGGGCEES
T ss_pred             CCCeeehhhhcccCCEEEEEEEcCCCccHHHHHHHcCC-CCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEe
Confidence            55555554443345678999999999988765543332 34455788999999999999998   89999999999999 


Q ss_pred             --cCCCCCeEeeeeceEEeCCCCcceeceeeecccccCchhH------HHHHHHhcCCCcc-eeecccccCCCCCC----
Q 045577          264 --DAEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPEL------LQAWKLWSEGDPM-EIIDEQTKMKGPFS----  330 (392)
Q Consensus       264 --~~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~------~~~~diws~G~v~-~~ld~~~~~~~~~~----  330 (392)
                        +.++.+||+|||+++.....   ......|++.|+| ||.      ..+.|+|+.|+++ +++.+..++.....    
T Consensus       141 ~~~~~~~~kl~Dfg~~~~~~~~---~~~~~~~~~~y~a-PE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~  216 (304)
T 2jam_A          141 TPEENSKIMITDFGLSKMEQNG---IMSTACGTPGYVA-PEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETESKLF  216 (304)
T ss_dssp             SSSTTCCEEBCSCSTTCCCCCB---TTHHHHSCCCBCC-TTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTTSCHHHHH
T ss_pred             cCCCCCCEEEccCCcceecCCC---ccccccCCCCccC-hHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHH
Confidence              77889999999998754321   1223468999999 664      3588999999876 45554333322111    


Q ss_pred             ---------------HHHHHHHHHHHHhhcccCcCCCCCHHHHHH--HHccC
Q 045577          331 ---------------ADELVKCIEVGLLCVQQRIEDWPTMSSVLT--MLSNE  365 (392)
Q Consensus       331 ---------------~~~~~~~~~i~~~Cl~~dp~~RPsm~eVv~--~L~~~  365 (392)
                                     ......+.+++..|++.||++||++.++++  .+++.
T Consensus       217 ~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~~  268 (304)
T 2jam_A          217 EKIKEGYYEFESPFWDDISESAKDFICHLLEKDPNERYTCEKALSHPWIDGN  268 (304)
T ss_dssp             HHHHHCCCCCCTTTTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHTSHHHHSS
T ss_pred             HHHHcCCCCCCccccccCCHHHHHHHHHHcCCChhHCcCHHHHhcCccccCC
Confidence                           112245667888999999999999999986  35443

>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A

Probab=99.78  E-value=4.9e-20  Score=179.08  Aligned_cols=165  Identities=19%  Similarity=0.280  Sum_probs=116.7

Q ss_pred             CCCccccccCcCCCC------CeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeeccccc
Q 045577          185 SGGCKRNWEADCGDG------EVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKT  258 (392)
Q Consensus       185 s~GCvR~~~l~C~~~------~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp  258 (392)
                      |++.++........+      +.|++|||+.+ ++....   ........+..++.|++.||.|||+.   +|+||||||
T Consensus       100 h~niv~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~---~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp  172 (371)
T 4exu_A          100 HENVIGLLDVFTPASSLRNFYDFYLVMPFMQT-DLQKIM---GMEFSEEKIQYLVYQMLKGLKYIHSA---GVVHRDLKP  172 (371)
T ss_dssp             CTTBCCCSEEECSCSSSTTCCCCEEEEECCCE-EHHHHT---TSCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCG
T ss_pred             CCCchhhhhheeccCCcccceeEEEEEccccc-cHHHHh---hcCCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCcCH
Confidence            666666555433222      34999999984 443322   11234555788999999999999998   899999999


Q ss_pred             ceeEEcCCCCCeEeeeeceEEeCCCCcceeceeeecccccCchhHH-------HHHHHhcCCCcc-eeecccccCCCCCC
Q 045577          259 SNVLLDAEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELL-------QAWKLWSEGDPM-EIIDEQTKMKGPFS  330 (392)
Q Consensus       259 ~NIll~~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~-------~~~diws~G~v~-~~ld~~~~~~~~~~  330 (392)
                      +||+++.++.+||+|||+++.....    .....||+.|+| ||..       .+.|+|+.|+++ +++.+..++.+...
T Consensus       173 ~NIll~~~~~~kL~Dfg~a~~~~~~----~~~~~~t~~y~a-PE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~  247 (371)
T 4exu_A          173 GNLAVNEDCELKILDFGLARHADAE----MTGYVVTRWYRA-PEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDY  247 (371)
T ss_dssp             GGEEECTTCCEEECSTTCC------------CTTCCCTTSC-HHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSH
T ss_pred             HHeEECCCCCEEEEecCcccccccC----cCCcccCccccC-HHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCh
Confidence            9999999999999999999865421    223468999999 7765       368999999976 56666544433221


Q ss_pred             HHH----------------------------------------------HHHHHHHHHhhcccCcCCCCCHHHHHHH
Q 045577          331 ADE----------------------------------------------LVKCIEVGLLCVQQRIEDWPTMSSVLTM  361 (392)
Q Consensus       331 ~~~----------------------------------------------~~~~~~i~~~Cl~~dp~~RPsm~eVv~~  361 (392)
                      .+.                                              ...+.+++..|++.||++|||+.++++.
T Consensus       248 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h  324 (371)
T 4exu_A          248 LDQLTQILKVTGVPGTEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTH  324 (371)
T ss_dssp             HHHHHHHHHHHCCCCHHHHTTCSCHHHHHHHHHSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred             HHHHHHHHHHhCCCcHHHHHHhhhhhhhhhhhccCCCcchhHHHhccccChHHHHHHHHHCCCChhhcCCHHHHhcC
Confidence            111                                              2345678889999999999999999865

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A

Probab=99.78  E-value=9.4e-20  Score=176.35  Aligned_cols=154  Identities=23%  Similarity=0.295  Sum_probs=114.0

Q ss_pred             CeeEEecCccCCCcChhhhhhh-ccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEc------CCCCCeEe
Q 045577          200 EVFLMFEGIKLPDKSEFTCEFE-CSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLD------AEINPNIS  272 (392)
Q Consensus       200 ~~~lv~e~~~~~~l~~~~~~~~-~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~------~~~~~kl~  272 (392)
                      ..+++||++ ++++.....+.. .......+..++.||+.||.|||+++  +|+||||||+||+++      ..+.+||+
T Consensus       104 ~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~--~ivH~Dikp~NIll~~~~~~~~~~~~kl~  180 (373)
T 1q8y_A          104 HVVMVFEVL-GENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRC--GIIHTDIKPENVLMEIVDSPENLIQIKIA  180 (373)
T ss_dssp             EEEEEECCC-CEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTT--CEECSCCSGGGEEEEEEETTTTEEEEEEC
T ss_pred             eEEEEEecC-CCCHHHHHHHhhccCCcHHHHHHHHHHHHHHHHHHHhcC--CEEecCCChHHeEEeccCCCcCcceEEEc
Confidence            579999999 666665443321 22345557899999999999999853  699999999999994      34479999


Q ss_pred             eeeceEEeCCCCcceeceeeecccccCchhHH------HHHHHhcCCCcc-eeecccccCCCC-----------------
Q 045577          273 DFGPARIFGDQTEEVTGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIIDEQTKMKGP-----------------  328 (392)
Q Consensus       273 DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld~~~~~~~~-----------------  328 (392)
                      |||+++.....    .....||+.|+| ||..      .+.|+|+.|+++ +++.+..++.+.                 
T Consensus       181 Dfg~a~~~~~~----~~~~~~t~~y~a-PE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~  255 (373)
T 1q8y_A          181 DLGNACWYDEH----YTNSIQTREYRS-PEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIE  255 (373)
T ss_dssp             CCTTCEETTBC----CCSCCSCGGGCC-HHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CHHHHHHHHHH
T ss_pred             ccccccccCCC----CCCCCCCccccC-cHHHhCCCCCchHhHHHHHHHHHHHHhCCCCCCCCcccccCChHHHHHHHHH
Confidence            99999876421    223578999999 7765      378999999877 555554433321                 


Q ss_pred             ----------------------------------------------CCHHHHHHHHHHHHhhcccCcCCCCCHHHHHHH
Q 045577          329 ----------------------------------------------FSADELVKCIEVGLLCVQQRIEDWPTMSSVLTM  361 (392)
Q Consensus       329 ----------------------------------------------~~~~~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~  361 (392)
                                                                    .+......+.+++..|++.||++|||+.++++.
T Consensus       256 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h  334 (373)
T 1q8y_A          256 LLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLVNH  334 (373)
T ss_dssp             HHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBCHHHHHTC
T ss_pred             hcCCCCHHHHhccchhhhhcCCcchhcccccccccchhhhhhhcccCCcchHHHHHHHHHHHhccCccccCCHHHHhhC
Confidence                                                          122334567788999999999999999999874

>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*

Probab=99.78  E-value=2.7e-20  Score=190.70  Aligned_cols=124  Identities=16%  Similarity=0.064  Sum_probs=90.5

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEc
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLD  264 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~  264 (392)
                      |.+.+|......++++.|+||||+++++|.+.+.+...+.    ..+|+.||+.||.|+|++   +||||||||+|||++
T Consensus       301 ~~~i~~~~~~~ed~~~~yLVMEyv~G~~L~d~i~~~~~l~----~~~I~~QIl~AL~ylH~~---GIIHRDIKPeNILL~  373 (569)
T 4azs_A          301 GFDAPAVLAHGENAQSGWLVMEKLPGRLLSDMLAAGEEID----REKILGSLLRSLAALEKQ---GFWHDDVRPWNVMVD  373 (569)
T ss_dssp             TCCCCCEEEEEECSSEEEEEEECCCSEEHHHHHHTTCCCC----HHHHHHHHHHHHHHHHHT---TCEESCCCGGGEEEC
T ss_pred             CCCeeEEEEEEEECCEEEEEEecCCCCcHHHHHHhCCCCC----HHHHHHHHHHHHHHHHHC---CceeccCchHhEEEC
Confidence            6677777777767788999999999999998776554332    346899999999999998   999999999999999


Q ss_pred             CCCCCeEeeeeceEEeCCCCcceeceeeecccccCchhHH-----HHHHHhcCCCcce
Q 045577          265 AEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELL-----QAWKLWSEGDPME  317 (392)
Q Consensus       265 ~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~-----~~~diws~G~v~~  317 (392)
                      .++.+||+|||+|+...... ......+||++||+ ||+.     ...|+|+.|+...
T Consensus       374 ~dg~vKL~DFGlAr~~~~~~-~~~~t~vGTp~YmA-PE~l~g~~~~~~d~~s~g~~~~  429 (569)
T 4azs_A          374 ARQHARLIDFGSIVTTPQDC-SWPTNLVQSFFVFV-NELFAENKSWNGFWRSAPVHPF  429 (569)
T ss_dssp             TTSCEEECCCTTEESCC----CCSHHHHHHHHHHH-HHHC-----------------C
T ss_pred             CCCCEEEeecccCeeCCCCC-ccccCceechhhcc-HHHhCCCCCCcccccccccchh
Confidence            99999999999998764322 22334689999999 6654     3568898887653

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}

Probab=99.77  E-value=8.6e-20  Score=172.47  Aligned_cols=157  Identities=20%  Similarity=0.317  Sum_probs=112.7

Q ss_pred             CCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEc-CCCCCeEeeeec
Q 045577          198 DGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLD-AEINPNISDFGP  276 (392)
Q Consensus       198 ~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~-~~~~~kl~DFGl  276 (392)
                      .+..|++|||++ +++.....+  .......+..++.|++.||.|||+.   +|+||||||+||+++ .++.+||+|||+
T Consensus        94 ~~~~~lv~e~~~-~~L~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~kl~Dfg~  167 (320)
T 2i6l_A           94 LNSVYIVQEYME-TDLANVLEQ--GPLLEEHARLFMYQLLRGLKYIHSA---NVLHRDLKPANLFINTEDLVLKIGDFGL  167 (320)
T ss_dssp             CSEEEEEEECCS-EEHHHHHTT--CCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEEETTTTEEEECCCTT
T ss_pred             cCceeEEeeccC-CCHHHHhhc--CCccHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCCCeEEEccCcc
Confidence            356899999998 466544322  2234455788999999999999998   899999999999997 567899999999


Q ss_pred             eEEeCCCC--cceeceeeecccccCchhHH-------HHHHHhcCCCcc-eeecccccCCCCCCHH--------------
Q 045577          277 ARIFGDQT--EEVTGRVIGTQTLKTVPELL-------QAWKLWSEGDPM-EIIDEQTKMKGPFSAD--------------  332 (392)
Q Consensus       277 a~~~~~~~--~~~~~~~~gt~~y~a~~~~~-------~~~diws~G~v~-~~ld~~~~~~~~~~~~--------------  332 (392)
                      ++......  ........++..|+| ||..       .+.|+|+.|+++ +++.++..+.+....+              
T Consensus       168 ~~~~~~~~~~~~~~~~~~~~~~y~a-PE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~  246 (320)
T 2i6l_A          168 ARIMDPHYSHKGHLSEGLVTKWYRS-PRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLILESIPVVHE  246 (320)
T ss_dssp             CBCC--------CCCGGGSCCTTCC-HHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHSCCCCH
T ss_pred             ccccCCCcccccccccccccccccC-cHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCch
Confidence            98654211  112223457888999 6654       368999999876 5666544443322111              


Q ss_pred             -------------------------------HHHHHHHHHHhhcccCcCCCCCHHHHHHH
Q 045577          333 -------------------------------ELVKCIEVGLLCVQQRIEDWPTMSSVLTM  361 (392)
Q Consensus       333 -------------------------------~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~  361 (392)
                                                     ....+.+++..|++.||++||++.++++.
T Consensus       247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h  306 (320)
T 2i6l_A          247 EDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEALSH  306 (320)
T ss_dssp             HHHHHHHTTSCHHHHHHTTSCCCCHHHHSTTCCHHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred             hhhhhhhhcCcccccccccCCCCChhHhcchhhHHHHHHHHHHcCCCccccCCHHHHhCC
Confidence                                           12346678889999999999999999863

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}

Probab=99.77  E-value=5.9e-20  Score=181.22  Aligned_cols=150  Identities=13%  Similarity=0.107  Sum_probs=107.4

Q ss_pred             CeeEEecCccCCCcChhhh--h----hhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEcCCCCCeEee
Q 045577          200 EVFLMFEGIKLPDKSEFTC--E----FECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEINPNISD  273 (392)
Q Consensus       200 ~~~lv~e~~~~~~l~~~~~--~----~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~~~~~~kl~D  273 (392)
                      ..|++|+.+. +++.....  .    .........++.++.|+++||.|||+.   +|+||||||+|||++.++.+||+|
T Consensus       179 ~~~~~~~~~~-~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~iiHrDiKp~NILl~~~~~~kL~D  254 (413)
T 3dzo_A          179 SRFFLYPRMQ-SNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHY---GLVHTYLRPVDIVLDQRGGVFLTG  254 (413)
T ss_dssp             SEEEEEECCS-EEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTCCEEECC
T ss_pred             ceEEEeehhc-CCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCcccceEEEecCCeEEEEe
Confidence            4677887765 45544221  1    011123444788889999999999998   899999999999999999999999


Q ss_pred             eeceEEeCCCCcceeceeeecccccCchhHH----------------HHHHHhcCCCcc-eeecccccCCCCCC------
Q 045577          274 FGPARIFGDQTEEVTGRVIGTQTLKTVPELL----------------QAWKLWSEGDPM-EIIDEQTKMKGPFS------  330 (392)
Q Consensus       274 FGla~~~~~~~~~~~~~~~gt~~y~a~~~~~----------------~~~diws~G~v~-~~ld~~~~~~~~~~------  330 (392)
                      ||+++.....    .....| +.|+| ||+.                .+.|+|++|+++ +++.++.++.....      
T Consensus       255 FG~a~~~~~~----~~~~~g-~~y~a-PE~~~~~~~~~~~~~~~~~~~~~DvwSlGvil~elltg~~Pf~~~~~~~~~~~  328 (413)
T 3dzo_A          255 FEHLVRDGAS----AVSPIG-RGFAP-PETTAERMLPFGQHHPTLMTFAFDTWTLGLAIYWIWCADLPNTDDAALGGSEW  328 (413)
T ss_dssp             GGGCEETTEE----ECCCCC-TTTCC-HHHHHHHTSTTGGGCCEEECHHHHHHHHHHHHHHHHHSSCCCCTTGGGSCSGG
T ss_pred             ccceeecCCc----cccCCC-CceeC-chhhhccccccccccCcCCCchhhHHHHHHHHHHHHHCCCCCCCcchhhhHHH
Confidence            9999875421    334567 99999 7776                288999999876 55555333322110      


Q ss_pred             -----HHHHHHHHHHHHhhcccCcCCCCCHHHHH
Q 045577          331 -----ADELVKCIEVGLLCVQQRIEDWPTMSSVL  359 (392)
Q Consensus       331 -----~~~~~~~~~i~~~Cl~~dp~~RPsm~eVv  359 (392)
                           ......+.+++..|++.||++||++.+++
T Consensus       329 ~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~~l  362 (413)
T 3dzo_A          329 IFRSCKNIPQPVRALLEGFLRYPKEDRLLPLQAM  362 (413)
T ss_dssp             GGSSCCCCCHHHHHHHHHHTCSSGGGSCCHHHHT
T ss_pred             HHhhcccCCHHHHHHHHHHccCChhhCcCHHHHH
Confidence                 11124567777899999999999976653

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}

Probab=99.77  E-value=1.4e-19  Score=174.38  Aligned_cols=150  Identities=20%  Similarity=0.302  Sum_probs=109.2

Q ss_pred             CeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEcCCCCCeEeeeeceEE
Q 045577          200 EVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEINPNISDFGPARI  279 (392)
Q Consensus       200 ~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~~~~~~kl~DFGla~~  279 (392)
                      +.|++|||+.+ ++......   ......+..++.|++.||.|||++   +|+||||||+||+++.++.+||+|||+++.
T Consensus       103 ~~~lv~e~~~~-~l~~~~~~---~~~~~~~~~i~~qi~~al~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~  175 (353)
T 3coi_A          103 DFYLVMPFMQT-DLQKIMGL---KFSEEKIQYLVYQMLKGLKYIHSA---GVVHRDLKPGNLAVNEDCELKILDFGLARH  175 (353)
T ss_dssp             CCEEEEECCSE-EGGGTTTS---CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECTTCCEEECSTTCTTC
T ss_pred             eEEEEeccccC-CHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEeECCCCcEEEeecccccC
Confidence            45999999984 55433211   134455788999999999999998   899999999999999999999999999875


Q ss_pred             eCCCCcceeceeeecccccCchhHH-------HHHHHhcCCCcc-eeecccccCCCCCCH--------------------
Q 045577          280 FGDQTEEVTGRVIGTQTLKTVPELL-------QAWKLWSEGDPM-EIIDEQTKMKGPFSA--------------------  331 (392)
Q Consensus       280 ~~~~~~~~~~~~~gt~~y~a~~~~~-------~~~diws~G~v~-~~ld~~~~~~~~~~~--------------------  331 (392)
                      ...    ......||+.|+| ||..       .+.|+|+.|+++ +++.+...+.+....                    
T Consensus       176 ~~~----~~~~~~~t~~y~a-PE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~  250 (353)
T 3coi_A          176 ADA----EMTGYVVTRWYRA-PEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQK  250 (353)
T ss_dssp             ------------CCSBCCSC-HHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSSCHHHHHHHHHHHHCBCCHHHHTT
T ss_pred             CCC----CccccccCcCcCC-HHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHH
Confidence            432    1223578999999 7754       368999999876 555554443322111                    


Q ss_pred             --------------------------HHHHHHHHHHHhhcccCcCCCCCHHHHHHH
Q 045577          332 --------------------------DELVKCIEVGLLCVQQRIEDWPTMSSVLTM  361 (392)
Q Consensus       332 --------------------------~~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~  361 (392)
                                                .....+.+++..|++.||++||++.++++.
T Consensus       251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~h  306 (353)
T 3coi_A          251 LNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTH  306 (353)
T ss_dssp             CSCHHHHHHHHTSCBCSSCCTTTTCTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred             HhhHHHHHHHHhCcCCCCccHHHhcCCcCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence                                      112345678889999999999999999864

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*

Probab=99.76  E-value=1.6e-19  Score=168.74  Aligned_cols=169  Identities=18%  Similarity=0.192  Sum_probs=121.6

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEc
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLD  264 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~  264 (392)
                      |++.++........+..|++|||++++++........ ......+..++.|++.||.|||+.   +++||||||+||+++
T Consensus        80 h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dl~p~NIlv~  155 (287)
T 2wei_A           80 HPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRK-RFSEHDAARIIKQVFSGITYMHKH---NIVHRDLKPENILLE  155 (287)
T ss_dssp             CTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEES
T ss_pred             CCCccEEEEEEeCCCeEEEEEEccCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCChhhEEEe
Confidence            4455554444444567899999999988866544333 234555889999999999999998   899999999999997


Q ss_pred             CC---CCCeEeeeeceEEeCCCCcceeceeeecccccCchhHH-----HHHHHhcCCCcc-eeecccccCCCCCCH----
Q 045577          265 AE---INPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELL-----QAWKLWSEGDPM-EIIDEQTKMKGPFSA----  331 (392)
Q Consensus       265 ~~---~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~-----~~~diws~G~v~-~~ld~~~~~~~~~~~----  331 (392)
                      .+   +.+||+|||++.......  ......|++.|+| ||..     .+.|+|+.|+++ +++.+..++.+....    
T Consensus       156 ~~~~~~~~kL~Dfg~~~~~~~~~--~~~~~~~~~~y~a-PE~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~  232 (287)
T 2wei_A          156 SKEKDCDIKIIDFGLSTCFQQNT--KMKDRIGTAYYIA-PEVLRGTYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILK  232 (287)
T ss_dssp             CSSTTCCEEECSTTGGGTBCCCS--SCSCHHHHHTTCC-HHHHTTCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHH
T ss_pred             cCCCcccEEEeccCcceeecCCC--ccccccCcccccC-hHHhcCCCCCchhhHhHHHHHHHHHhCCCCCCCCCHHHHHH
Confidence            54   469999999987654222  1222458899999 7765     378999999876 455543333221111    


Q ss_pred             ---------------HHHHHHHHHHHhhcccCcCCCCCHHHHHH
Q 045577          332 ---------------DELVKCIEVGLLCVQQRIEDWPTMSSVLT  360 (392)
Q Consensus       332 ---------------~~~~~~~~i~~~Cl~~dp~~RPsm~eVv~  360 (392)
                                     .....+.+++..|++.+|++||++.++++
T Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~  276 (287)
T 2wei_A          233 RVETGKYAFDLPQWRTISDDAKDLIRKMLTFHPSLRITATQCLE  276 (287)
T ss_dssp             HHHHCCCCCCSGGGTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHHcCCCCCCchhhhhcCHHHHHHHHHHcccChhhCcCHHHHhc
Confidence                           11234667888999999999999999987

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}

Probab=99.76  E-value=3.1e-19  Score=186.98  Aligned_cols=167  Identities=13%  Similarity=0.139  Sum_probs=118.1

Q ss_pred             CCCccccccCcCCCCC-----eeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccc
Q 045577          185 SGGCKRNWEADCGDGE-----VFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTS  259 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~-----~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~  259 (392)
                      |++.++........+.     .|+||||++++++......   ......++.++.||+.||.|||++   +|+||||||+
T Consensus       138 hp~iv~~~~~~~~~~~~~~~~~~lv~E~~~g~~L~~~~~~---~l~~~~~~~~~~qi~~aL~~lH~~---giiHrDlkp~  211 (681)
T 2pzi_A          138 HPSIVQIFNFVEHTDRHGDPVGYIVMEYVGGQSLKRSKGQ---KLPVAEAIAYLLEILPALSYLHSI---GLVYNDLKPE  211 (681)
T ss_dssp             CTTBCCEEEEEEEECTTSCEEEEEEEECCCCEECC----C---CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGG
T ss_pred             CCCcCeEeeeEeecCCCCCceeEEEEEeCCCCcHHHHHhC---CCCHHHHHHHHHHHHHHHHHHHHC---CCeecccChH
Confidence            5555555443322222     6999999999988764432   344556889999999999999998   8999999999


Q ss_pred             eeEEcCCCCCeEeeeeceEEeCCCCcceeceeeecccccCchhHH-----HHHHHhcCCCcc-eeecccccCCCC-----
Q 045577          260 NVLLDAEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELL-----QAWKLWSEGDPM-EIIDEQTKMKGP-----  328 (392)
Q Consensus       260 NIll~~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~-----~~~diws~G~v~-~~ld~~~~~~~~-----  328 (392)
                      ||+++.+ .+||+|||+++.....     ....||+.|+| ||+.     .+.|+|+.|+++ +++.+.+.+.+.     
T Consensus       212 NIll~~~-~~kl~DFG~a~~~~~~-----~~~~gt~~y~a-PE~~~~~~~~~sDi~slG~~l~~l~~g~~~~~~~~~~~~  284 (681)
T 2pzi_A          212 NIMLTEE-QLKLIDLGAVSRINSF-----GYLYGTPGFQA-PEIVRTGPTVATDIYTVGRTLAALTLDLPTRNGRYVDGL  284 (681)
T ss_dssp             GEEECSS-CEEECCCTTCEETTCC-----SCCCCCTTTSC-TTHHHHCSCHHHHHHHHHHHHHHHHSCCCEETTEECSSC
T ss_pred             HeEEeCC-cEEEEecccchhcccC-----CccCCCccccC-HHHHcCCCCCceehhhhHHHHHHHHhCCCCCcccccccc
Confidence            9999986 8999999999876432     33579999999 6655     378999999877 333332221110     


Q ss_pred             --CC--HHHHHHHHHHHHhhcccCcCCCCC-HHHHHHHHcc
Q 045577          329 --FS--ADELVKCIEVGLLCVQQRIEDWPT-MSSVLTMLSN  364 (392)
Q Consensus       329 --~~--~~~~~~~~~i~~~Cl~~dp~~RPs-m~eVv~~L~~  364 (392)
                        ..  ......+.+++..|++.||++||+ ++++.+.|.+
T Consensus       285 ~~~~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~  325 (681)
T 2pzi_A          285 PEDDPVLKTYDSYGRLLRRAIDPDPRQRFTTAEEMSAQLTG  325 (681)
T ss_dssp             CTTCHHHHHCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHH
T ss_pred             cccccccccCHHHHHHHhhhccCChhhCCCHHHHHHHHHHH
Confidence              11  112245677888999999999995 6666666654

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*

Probab=99.76  E-value=2.4e-19  Score=168.77  Aligned_cols=142  Identities=16%  Similarity=0.160  Sum_probs=106.9

Q ss_pred             CCeeEEecCccCCCcChhhhhhhc-cccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEcC---CCCCeEeee
Q 045577          199 GEVFLMFEGIKLPDKSEFTCEFEC-SKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDA---EINPNISDF  274 (392)
Q Consensus       199 ~~~~lv~e~~~~~~l~~~~~~~~~-~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~~---~~~~kl~DF  274 (392)
                      +..|++|||++++++.....+... ......+..++.|++.||.|||+.   +|+||||||+||+++.   ++.+||+||
T Consensus        88 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~~~kl~Df  164 (299)
T 3m2w_A           88 KCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDF  164 (299)
T ss_dssp             EEEEEEECCCCSCBHHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSTTCCEEECCC
T ss_pred             ceEEEEEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEecCCCCCcEEEecc
Confidence            457999999999998776544322 235556889999999999999998   8999999999999998   788999999


Q ss_pred             eceEEeCCCCcceeceeeecccccCchhHHHHHHHhcCCCcc-eeecccccCCCC-------------------CCH---
Q 045577          275 GPARIFGDQTEEVTGRVIGTQTLKTVPELLQAWKLWSEGDPM-EIIDEQTKMKGP-------------------FSA---  331 (392)
Q Consensus       275 Gla~~~~~~~~~~~~~~~gt~~y~a~~~~~~~~diws~G~v~-~~ld~~~~~~~~-------------------~~~---  331 (392)
                      |++.....                  ..+..+.|+|+.|+++ +++.+..++...                   .+.   
T Consensus       165 g~a~~~~~------------------~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (299)
T 3m2w_A          165 GFAKETTG------------------EKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEW  226 (299)
T ss_dssp             TTCEECTT------------------CGGGGHHHHHHHHHHHHHHHHSSCSCCC-------CCSCCSSCTTCCSSCHHHH
T ss_pred             cccccccc------------------ccCCchhhHHHHHHHHHHHHHCCCCCCCCcchhhhHHHHHHHhhccccCCchhc
Confidence            99976431                  1223468999999876 444443332111                   011   


Q ss_pred             -HHHHHHHHHHHhhcccCcCCCCCHHHHHHH
Q 045577          332 -DELVKCIEVGLLCVQQRIEDWPTMSSVLTM  361 (392)
Q Consensus       332 -~~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~  361 (392)
                       .....+.+++..|++.||++||++.++++.
T Consensus       227 ~~~~~~~~~li~~~l~~dP~~Rps~~e~l~h  257 (299)
T 3m2w_A          227 SEVSEEVKMLIRNLLKTEPTQRMTITEFMNH  257 (299)
T ss_dssp             TTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred             ccCCHHHHHHHHHHcccChhhCCCHHHHhcC
Confidence             123456778889999999999999999973

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*

Probab=99.76  E-value=4.4e-20  Score=175.83  Aligned_cols=170  Identities=21%  Similarity=0.253  Sum_probs=107.7

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhh----hhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccce
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCE----FECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSN  260 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~----~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~N  260 (392)
                      |++.++.......++..|++|||+++ ++......    .........+..++.|++.||.|||+..  +++||||||+|
T Consensus        80 h~niv~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~--~ivH~dlkp~N  156 (327)
T 3aln_A           80 CPYIVQFYGALFREGDCWICMELMST-SFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENL--KIIHRDIKPSN  156 (327)
T ss_dssp             CTTBCCEEEEEECSSEEEEEECCCSE-EHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHHH--SCCCSCCCGGG
T ss_pred             CCcEeeeeeEEEeCCceEEEEeecCC-ChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhccC--CEeECCCCHHH
Confidence            66666666655556788999999996 43332211    1122345557889999999999999852  69999999999


Q ss_pred             eEEcCCCCCeEeeeeceEEeCCCCcceeceeeecccccCchhHH----------HHHHHhcCCCcc-eeecccccCCCC-
Q 045577          261 VLLDAEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELL----------QAWKLWSEGDPM-EIIDEQTKMKGP-  328 (392)
Q Consensus       261 Ill~~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~----------~~~diws~G~v~-~~ld~~~~~~~~-  328 (392)
                      |+++.++.+||+|||+++......  ......||+.|+| ||..          .+.|+|+.|+++ +++.+..++... 
T Consensus       157 Ill~~~~~~kl~Dfg~~~~~~~~~--~~~~~~gt~~y~a-PE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~  233 (327)
T 3aln_A          157 ILLDRSGNIKLCDFGISGQLVDSI--AKTRDAGCRPYMA-PERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWN  233 (327)
T ss_dssp             EEEETTTEEEECCCSSSCC---------------------------------CCSHHHHHHHHHHHHHHHHSCCCSSCC-
T ss_pred             EEEcCCCCEEEccCCCceeccccc--ccccCCCCccccC-ceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcc
Confidence            999999999999999997654221  1223468999999 6654          267999999876 444433222110 


Q ss_pred             --------------------CCHHHHHHHHHHHHhhcccCcCCCCCHHHHHH
Q 045577          329 --------------------FSADELVKCIEVGLLCVQQRIEDWPTMSSVLT  360 (392)
Q Consensus       329 --------------------~~~~~~~~~~~i~~~Cl~~dp~~RPsm~eVv~  360 (392)
                                          ........+.+++..|++.||++||++.++++
T Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~  285 (327)
T 3aln_A          234 SVFDQLTQVVKGDPPQLSNSEEREFSPSFINFVNLCLTKDESKRPKYKELLK  285 (327)
T ss_dssp             ------CCCCCSCCCCCCCCSSCCCCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred             hHHHHHHHHhcCCCCCCCCcccccCCHHHHHHHHHHhhCChhhCcCHHHHHh
Confidence                                00112345677888999999999999999865

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A

Probab=99.72  E-value=5.3e-19  Score=165.77  Aligned_cols=151  Identities=10%  Similarity=-0.015  Sum_probs=111.6

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEc
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLD  264 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~  264 (392)
                      |++.++.......++..|+||||++++++.....+.  . ....+.+++.|++.||.|||+.   +|+||||||+||+++
T Consensus        90 hp~iv~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~--~-~~~~~~~i~~ql~~aL~~lH~~---givH~Dikp~NIll~  163 (286)
T 3uqc_A           90 KPGVARVLDVVHTRAGGLVVAEWIRGGSLQEVADTS--P-SPVGAIRAMQSLAAAADAAHRA---GVALSIDHPSRVRVS  163 (286)
T ss_dssp             CTTBCCEEEEEEETTEEEEEEECCCEEEHHHHHTTC--C-CHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEEE
T ss_pred             CCCcceeeEEEEECCcEEEEEEecCCCCHHHHHhcC--C-ChHHHHHHHHHHHHHHHHHHHC---CCccCCCCcccEEEc
Confidence            666666655544456789999999999887765321  2 2334788999999999999998   899999999999999


Q ss_pred             CCCCCeEeeeeceEEeCCCCcceeceeeecccccCchhHHHHHHHhcCCCcc-eeecccccCCCCCC-------------
Q 045577          265 AEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELLQAWKLWSEGDPM-EIIDEQTKMKGPFS-------------  330 (392)
Q Consensus       265 ~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~~~~diws~G~v~-~~ld~~~~~~~~~~-------------  330 (392)
                      .++.+||++++                     |++  ....+.|+|++|+++ +++.++..+.+...             
T Consensus       164 ~~g~~kl~~~~---------------------~~~--~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~~~~~~~~~  220 (286)
T 3uqc_A          164 IDGDVVLAYPA---------------------TMP--DANPQDDIRGIGASLYALLVNRWPLPEAGVRSGLAPAERDTAG  220 (286)
T ss_dssp             TTSCEEECSCC---------------------CCT--TCCHHHHHHHHHHHHHHHHHSEECSCCCSBCCCSEECCBCTTS
T ss_pred             CCCCEEEEecc---------------------ccC--CCCchhHHHHHHHHHHHHHHCCCCCCcCCcchhhHHHHHHhcc
Confidence            99999987543                     222  134578999999876 44444333322110             


Q ss_pred             ---------HHHHHHHHHHHHhhcccCcCCCCCHHHHHHHHccC
Q 045577          331 ---------ADELVKCIEVGLLCVQQRIEDWPTMSSVLTMLSNE  365 (392)
Q Consensus       331 ---------~~~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~L~~~  365 (392)
                               ......+.+++.+|++.||++| |+.++++.|+..
T Consensus       221 ~~~~~~~~~~~~~~~l~~li~~~l~~dP~~R-s~~el~~~L~~~  263 (286)
T 3uqc_A          221 QPIEPADIDRDIPFQISAVAARSVQGDGGIR-SASTLLNLMQQA  263 (286)
T ss_dssp             CBCCHHHHCTTSCHHHHHHHHHHHCTTSSCC-CHHHHHHHHHHH
T ss_pred             CCCChhhcccCCCHHHHHHHHHHcccCCccC-CHHHHHHHHHHH
Confidence                     1122356778889999999999 999999999874

>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A

Probab=99.71  E-value=4.7e-18  Score=162.50  Aligned_cols=106  Identities=19%  Similarity=0.150  Sum_probs=85.2

Q ss_pred             CCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcC-cCCCCceeecccccceeEEcCCC---------
Q 045577          198 DGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLP-EDSRLEIIHRDHKTSNVLLDAEI---------  267 (392)
Q Consensus       198 ~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH-~~~~~~iiHrDlKp~NIll~~~~---------  267 (392)
                      ++..|+||||+++|++.....+  .......+..++.||+.||.||| +.   +|+||||||+|||++.++         
T Consensus       134 ~~~~~lv~E~~~~g~ll~~~~~--~~~~~~~~~~i~~qi~~aL~~lH~~~---~ivHrDlKp~NILl~~~~~~~~~~~~~  208 (336)
T 2vuw_A          134 DDQLFIVLEFEFGGIDLEQMRT--KLSSLATAKSILHQLTASLAVAEASL---RFEHRDLHWGNVLLKKTSLKKLHYTLN  208 (336)
T ss_dssp             TTCEEEEEEEECCCEETGGGTT--TCCCHHHHHHHHHHHHHHHHHHHHHH---CCBCSCCCGGGEEEEECSCSEEEEEET
T ss_pred             cCeEEEEEEecCCCccHHHHHh--cCCCHHHHHHHHHHHHHHHHHHHHhC---CEeECCCCHHHEEEeccCCcceeeecc
Confidence            5679999999998865554322  22345568999999999999999 77   899999999999999887         


Q ss_pred             -----------CCeEeeeeceEEeCCCCcceeceeeecccccCchhHH-----HHHHHhcCCCc
Q 045577          268 -----------NPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELL-----QAWKLWSEGDP  315 (392)
Q Consensus       268 -----------~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~-----~~~diws~G~v  315 (392)
                                 .+||+|||+++....      ....||+.|+| ||+.     ...|+|+.+..
T Consensus       209 ~~~~~~~~~~~~vkL~DFG~a~~~~~------~~~~gt~~y~a-PE~~~g~~~~~~Diwsl~~~  265 (336)
T 2vuw_A          209 GKSSTIPSCGLQVSIIDYTLSRLERD------GIVVFCDVSMD-EDLFTGDGDYQFDIYRLMKK  265 (336)
T ss_dssp             TEEEEEECTTEEEEECCCTTCBEEET------TEEECCCCTTC-SGGGCCCSSHHHHHHHHHHH
T ss_pred             CccccccCCCceEEEeeccccEecCC------CcEEEeecccC-hhhhcCCCccceehhhhhCC
Confidence                       899999999987642      23579999999 6654     57899997443

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*

Probab=99.69  E-value=2.9e-18  Score=177.23  Aligned_cols=154  Identities=24%  Similarity=0.268  Sum_probs=112.5

Q ss_pred             CCCeeEEecCccCCCcChhhhhhh--ccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEcCCCC---CeEe
Q 045577          198 DGEVFLMFEGIKLPDKSEFTCEFE--CSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEIN---PNIS  272 (392)
Q Consensus       198 ~~~~~lv~e~~~~~~l~~~~~~~~--~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~~~~~---~kl~  272 (392)
                      ++..|++|||++++++........  +......+..++.|++.||.|||+.   +|+||||||+||+++.++.   +||+
T Consensus        90 ~~~~~LVmEy~~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL~yLHs~---gIVHrDLKP~NILl~~~g~~~~vKL~  166 (676)
T 3qa8_A           90 NDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHEN---RIIHRDLKPENIVLQPGPQRLIHKII  166 (676)
T ss_dssp             TSSCCCEEECCSSCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHHHHHHHT---TBCCCCCCSTTEEEECCSSSCEEEEC
T ss_pred             CCeEEEEEEeCCCCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCHHHeEeecCCCceeEEEc
Confidence            567899999999999977554322  2345556889999999999999998   8999999999999987665   8999


Q ss_pred             eeeceEEeCCCCcceeceeeecccccCchhHH------HHHHHhcCCCcc-eeecccccCCC------------------
Q 045577          273 DFGPARIFGDQTEEVTGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIIDEQTKMKG------------------  327 (392)
Q Consensus       273 DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld~~~~~~~------------------  327 (392)
                      |||+++......  ......||+.|+| ||..      .+.|+|+.|+++ +++.+..++.+                  
T Consensus       167 DFG~a~~~~~~~--~~~~~~gt~~Y~A-PE~l~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~~~~~~~i~~~~~~~  243 (676)
T 3qa8_A          167 DLGYAKELDQGE--LCTEFVGTLQYLA-PELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQPVQWHGKVREKSNEH  243 (676)
T ss_dssp             SCCCCCBTTSCC--CCCCCCSCCTTCS-SCSSCCSCCSTTHHHHHHHHHHHHHHSSCSSCCSSCHHHHSSTTCC------
T ss_pred             cccccccccccc--ccccccCCcccCC-hHHhccCCCCchhHHHHHHHHHHHHHHCCCCCCcccchhhhhhhhhcccchh
Confidence            999998754222  2233578999999 6543      478999999876 44444333211                  


Q ss_pred             ---------------------CCCHHHHHHHHHHHHhhcccCcCCCCCHHH
Q 045577          328 ---------------------PFSADELVKCIEVGLLCVQQRIEDWPTMSS  357 (392)
Q Consensus       328 ---------------------~~~~~~~~~~~~i~~~Cl~~dp~~RPsm~e  357 (392)
                                           .........+.+++..|++.||++||++.+
T Consensus       244 ~~~~~~l~g~~~~~~~lp~p~~l~~~ls~~L~dLI~~mL~~DP~kRPTa~e  294 (676)
T 3qa8_A          244 IVVYDDLTGAVKFSSVLPTPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQ  294 (676)
T ss_dssp             CCSCCCCSSSCCCCSSSCCSCCCCGGGHHHHHHHHHHHSCSSCC---CCTT
T ss_pred             hhhhhhhccccccccccCCchhhchhhhHHHHHHHHHHccCCHhhCcCHHH
Confidence                                 112234566778888999999999999866

>3a0c_A Mannose/sialic acid-binding lectin; beta-prism II, sugar binding protein; 2.00A {Polygonatum cyrtonema} PDB: 3a0d_A* 3a0e_A*

Probab=99.44  E-value=5.8e-13  Score=106.27  Aligned_cols=90  Identities=18%  Similarity=0.248  Sum_probs=70.6

Q ss_pred             CCCcEEecCCCeEEeeecCCCCCCceEEEEEEeCCCCceEEEecCCCCccc---cccCCCCC-------ceEEEecCCCC
Q 045577           29 EVRDILLAPSTLWGGNSLIPGNSSQSFLVISYKNLPPLVIWVANRNGSINS---NLSQDNDL-------GIIWNVILPRA   98 (392)
Q Consensus        29 ~~~~~l~s~~~~f~~gf~~~~~~~~~~~~i~~~~~~~~~vW~anr~~p~~~---~~~~~~~~-------~~~w~~~~~~~   98 (392)
                      ..+++|+ ++|.|.++|...++      -++|+  ..++||+||++.|..+   .|..+|+|       .++|++++...
T Consensus        11 ~~g~~l~-~~~~~~l~~~~dGn------lvl~~--~~~~vW~sn~~~~~~~~~l~l~~dGNLVl~~~~~~~~W~S~t~~~   81 (110)
T 3a0c_A           11 FTGHSLE-VGPSYRLIMQGDCN------FVLYD--SGKPVWASNTGGLGSGCRLTLHNNGNLVIYDQSNRVIWQTKTNGK   81 (110)
T ss_dssp             CTTCEEE-ETTTEEEEECTTSC------EEEEE--TTEEEEECCCTTSCSSCEEEECTTSCEEEECTTCCEEEECCCCCS
T ss_pred             CCCCEEE-ECCCEEEEEcCCCc------EEEEE--CCEEEEECCCCCCCCcEEEEEeCCCCEEEECCCCcEEEecCCCCC
Confidence            4578899 89999999987654      36776  3589999999876533   57788888       47999987544


Q ss_pred             CCCceEEEecCCCeEEEeccCCCCCceEEeeecCCC
Q 045577           99 TGSPALQLLVAGNLVLREFSLSHSEGYLWESFDSPS  134 (392)
Q Consensus        99 ~~~~~~~l~d~Gnlvl~~~~~~~~~~~~Wqsfd~pt  134 (392)
                      .+...++|+|+|||||++      . .+||||++|.
T Consensus        82 ~g~~~l~l~~dGnlvl~~------~-~~W~S~~~~~  110 (110)
T 3a0c_A           82 EDHYVLVLQQDRNVVIYG------P-VVWATGSGPA  110 (110)
T ss_dssp             SSCCEEEECTTSCEEEEC------S-EEEECSCCC-
T ss_pred             CCCEEEEEeCCccEEEEC------C-CEecCCCcCC
Confidence            455689999999999963      1 7999999984

>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*

Probab=99.43  E-value=8.5e-15  Score=149.06  Aligned_cols=106  Identities=23%  Similarity=0.280  Sum_probs=82.8

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEc
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLD  264 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~  264 (392)
                      |++.++..-..+..++.|++|||++++++.....+         +..++.|+++||.|||++   +|+||||||+|||++
T Consensus       398 h~nIv~~~~~~~~~~~~~lVmE~~~ggsL~~~l~~---------~~~i~~qi~~aL~~LH~~---gIiHrDiKp~NILl~  465 (540)
T 3en9_A          398 DFGIPAPYIFDVDLDNKRIMMSYINGKLAKDVIED---------NLDIAYKIGEIVGKLHKN---DVIHNDLTTSNFIFD  465 (540)
T ss_dssp             GGTCCCCCEEEEETTTTEEEEECCCSEEHHHHSTT---------CTHHHHHHHHHHHHHHHT---TEECTTCCTTSEEES
T ss_pred             CCCcCceEEEEEeCCccEEEEECCCCCCHHHHHHH---------HHHHHHHHHHHHHHHHHC---cCccCCCCHHHEEEC
Confidence            66666433333345678999999999988765443         568999999999999998   899999999999999


Q ss_pred             CCCCCeEeeeeceEEeCCCCcc------eeceeeecccccCchhHHH
Q 045577          265 AEINPNISDFGPARIFGDQTEE------VTGRVIGTQTLKTVPELLQ  305 (392)
Q Consensus       265 ~~~~~kl~DFGla~~~~~~~~~------~~~~~~gt~~y~a~~~~~~  305 (392)
                      .  .+||+|||+++........      ......||+.||| ||+..
T Consensus       466 ~--~~kL~DFGla~~~~~~~~~~~~~~~~~~~~~GT~~y~A-PEv~~  509 (540)
T 3en9_A          466 K--DLYIIDFGLGKISNLDEDKAVDLIVFKKAVLSTHHEKF-DEIWE  509 (540)
T ss_dssp             S--SEEECCCTTCEECCCHHHHHHHHHHHHHHHHHHCGGGH-HHHHH
T ss_pred             C--eEEEEECccCEECCCccccccchhhhhhhhcCCCCcCC-HHHHH
Confidence            8  9999999999987532211      1234689999999 77654

>1b2p_A Protein (lectin); mannose-binding lectin, monocot, aglutinin, bluebell bulbs, carbohydrate interactions, sugar binding protein; 1.70A {Hyacinthoides hispanica} SCOP: b.78.1.1

Probab=99.43  E-value=8.3e-13  Score=106.79  Aligned_cols=87  Identities=23%  Similarity=0.307  Sum_probs=64.6

Q ss_pred             CCCcEEe--cCCCeEEeeecCCCCCCceEEEEEEeCCCCceEEEecCCCCccc---cccCCCCC-------ceEEEecCC
Q 045577           29 EVRDILL--APSTLWGGNSLIPGNSSQSFLVISYKNLPPLVIWVANRNGSINS---NLSQDNDL-------GIIWNVILP   96 (392)
Q Consensus        29 ~~~~~l~--s~~~~f~~gf~~~~~~~~~~~~i~~~~~~~~~vW~anr~~p~~~---~~~~~~~~-------~~~w~~~~~   96 (392)
                      ..+++|+  |++|.|+++|+.+++      .+||+.  .++||+|||+.|-.+   .|..+|+|       .++|++++.
T Consensus        18 ~~g~~l~~~S~~g~~~L~~~~dgn------lvly~~--~~~vW~sn~~~~~~~~~l~l~~dGNLVl~d~~~~~lW~S~~~   89 (119)
T 1b2p_A           18 HATESLEILFGTHVYRFIMQTDCN------LVLYDN--NNPIWATNTGGLGNGCRAVLQPDGVLVVITNENVTVWQSPVA   89 (119)
T ss_dssp             ETTCEEEEEETTEEEEEEECTTSC------EEEEET--TEEEEECCCTTSCSSCEEEECTTSCEEEECTTCCEEEECSCC
T ss_pred             cCCCEEEEeCCCCCEEEEEecCCC------EEEEEC--CEEEEeCCCccCCCceEEEEccCCEEEEEeCCCcEEEcCCCC
Confidence            5678999  999999999998664      257875  689999999876432   46677777       468888764


Q ss_pred             CCCCCceEEEecCCCeEEEeccCCCCCceEEeee
Q 045577           97 RATGSPALQLLVAGNLVLREFSLSHSEGYLWESF  130 (392)
Q Consensus        97 ~~~~~~~~~l~d~Gnlvl~~~~~~~~~~~~Wqsf  130 (392)
                      ...+...++|+|+|||||++       ..+|||=
T Consensus        90 ~~~g~~~l~l~~~Gnlvl~~-------~~~W~Sg  116 (119)
T 1b2p_A           90 GKAGHYVLVLQPDRNVVIYG-------DALWATQ  116 (119)
T ss_dssp             CCSSCEEEEECTTSCEEEEE-------SEEEECC
T ss_pred             CCCCCEEEEEECCCcEEEEC-------ccEeCCC
Confidence            33445577888888888864       2688873

>4h3o_A Lectin; cadmium, plant protein; 2.17A {Allium sativum} PDB: 1kj1_A* 1bwu_P* 1kj1_D* 1bwu_Q* 1bwu_A* 1bwu_D*

Probab=99.42  E-value=9.8e-13  Score=103.94  Aligned_cols=84  Identities=20%  Similarity=0.248  Sum_probs=63.1

Q ss_pred             CCCcEEecCCCeEEeeecCCCCCCceEEEEEEeCCCCceEEEecCCCCccc----cccCCCCC-------ceEEEecCCC
Q 045577           29 EVRDILLAPSTLWGGNSLIPGNSSQSFLVISYKNLPPLVIWVANRNGSINS----NLSQDNDL-------GIIWNVILPR   97 (392)
Q Consensus        29 ~~~~~l~s~~~~f~~gf~~~~~~~~~~~~i~~~~~~~~~vW~anr~~p~~~----~~~~~~~~-------~~~w~~~~~~   97 (392)
                      ..++.|.|  |.|.+.|-..++     |.++.   ..++||+|||+.|..+    .+..||+|       .+||++++..
T Consensus        11 ~~g~~L~s--g~y~l~~q~DgN-----Lvly~---~~~~vW~ant~~~~~~~~~L~l~~dGnLvL~d~~~~~vWss~t~~   80 (105)
T 4h3o_A           11 YAGQSLDV--EPYHFIMQDDCN-----LVLYD---HSTSTWASNTEIGGKSGCSAVLQSDGNFVVYDSSGRSLWASHSTR   80 (105)
T ss_dssp             CTTCEEEE--TTEEEEECTTSC-----EEEEE---TTEEEEECCCCCTTCCSCEEEECTTSCEEEECTTCCEEEECCCCC
T ss_pred             cCCCEEEE--CCEEEEECCCCe-----EEEEE---CCEEEEEecCCCCCCccEEEEEeCCccEEEECCCcEEEEEecCCC
Confidence            34667776  668888765443     34433   3489999999999865    57788988       5899999765


Q ss_pred             CCCCceEEEecCCCeEEEeccCCCCCceEEee
Q 045577           98 ATGSPALQLLVAGNLVLREFSLSHSEGYLWES  129 (392)
Q Consensus        98 ~~~~~~~~l~d~Gnlvl~~~~~~~~~~~~Wqs  129 (392)
                      ..+...|+|+|+|||||++       ..||||
T Consensus        81 ~~~~~~l~L~ddGNlVly~-------~~~W~S  105 (105)
T 4h3o_A           81 GSGNYILILQDDGNVIIYG-------SDIWST  105 (105)
T ss_dssp             CSSCEEEEECTTSCEEEEE-------SEEEEC
T ss_pred             CCCCEEEEEeCCCeEEEEC-------CcEecC
Confidence            5556789999999999974       259998

>2dpf_A Curculin; sweet taste, taste modifying, plant protein; 1.50A {Curculigo latifolia} PDB: 2d04_B* 2d04_A*

Probab=99.35  E-value=3.8e-12  Score=102.37  Aligned_cols=90  Identities=20%  Similarity=0.252  Sum_probs=68.1

Q ss_pred             CCCcEEecCCCeEEeeecCCCCCCceEEEEEEeCCCCceEEEecCCCCccc---cccCCCCC-------ceEEEecCCCC
Q 045577           29 EVRDILLAPSTLWGGNSLIPGNSSQSFLVISYKNLPPLVIWVANRNGSINS---NLSQDNDL-------GIIWNVILPRA   98 (392)
Q Consensus        29 ~~~~~l~s~~~~f~~gf~~~~~~~~~~~~i~~~~~~~~~vW~anr~~p~~~---~~~~~~~~-------~~~w~~~~~~~   98 (392)
                      ..+++|+  +|.|+++|...++   .   ++|+  ..++||+|||+.|...   .|..+|+|       .++|+++....
T Consensus        12 ~~g~~L~--~g~~~L~~~~dgn---l---vly~--~~~~vW~sn~~~~~~~~~l~l~~~GnLvl~d~~~~~vW~S~~~~~   81 (115)
T 2dpf_A           12 HADHSLQ--AGAYTLTIQNKCN---L---VKYQ--NGRQIWASNTDRRGSGCRLTLLSDGNLVIYDHNNNDVWGSACWGD   81 (115)
T ss_dssp             ETTEEEE--ETTEEEEECTTSC---E---EEEE--TTEEEEECSCTTSCSSCEEEECTTSCEEEECTTCCEEEECCCCCS
T ss_pred             CCCCEEE--CCCEEEEEcCCCc---E---EEEe--CCEEEEeCCCCCCCCceEEEECCCCcEEEECCCceEEEEcCCCCC
Confidence            4467887  7999999986553   2   2355  3589999999988543   56778887       47999987544


Q ss_pred             CCCceEEEecCCCeEEEeccCCCCCceEEeeecCCCC
Q 045577           99 TGSPALQLLVAGNLVLREFSLSHSEGYLWESFDSPSD  135 (392)
Q Consensus        99 ~~~~~~~l~d~Gnlvl~~~~~~~~~~~~Wqsfd~ptd  135 (392)
                      .+...++|+|+|||||++      . .+||||.+++.
T Consensus        82 ~g~~~l~l~~dGnlvl~~------~-~~W~S~~~~~~  111 (115)
T 2dpf_A           82 NGKYALVLQKDGRFVIYG------P-VLWSLGPNGCR  111 (115)
T ss_dssp             SSCCEEEECTTSCEEEEC------S-EEECSSTTCBC
T ss_pred             CCCEEEEEeCCCeEEEEC------C-CEEECCCCCCc
Confidence            455689999999999963      2 79999998764

>1xd5_A Gastrodianin-1, antifungal protein GAFP-1; monocot mannose binding lectin, monomer, homogeneous beta- sheet; 2.00A {Gastrodia elata} SCOP: b.78.1.1 PDB: 1xd6_A

Probab=99.31  E-value=1.1e-11  Score=99.28  Aligned_cols=91  Identities=21%  Similarity=0.331  Sum_probs=68.1

Q ss_pred             CCCcEEecCCCeEEeeecCCCCCCceEEEEEEeCCCCceEEEecCCCCccc---cccCCCCC------ceEEEecCCCCC
Q 045577           29 EVRDILLAPSTLWGGNSLIPGNSSQSFLVISYKNLPPLVIWVANRNGSINS---NLSQDNDL------GIIWNVILPRAT   99 (392)
Q Consensus        29 ~~~~~l~s~~~~f~~gf~~~~~~~~~~~~i~~~~~~~~~vW~anr~~p~~~---~~~~~~~~------~~~w~~~~~~~~   99 (392)
                      ..+++|  ++|.|+++|+.+++      .++|+.  .++||+||++.+-.+   .|..+|+|      .++|++++....
T Consensus        11 ~~g~~L--~~~~~~L~~~~dgn------lvl~~~--~~~vW~sn~~~~~~~~~l~l~~~GNLvl~d~~~~~W~S~~~~~~   80 (112)
T 1xd5_A           11 DTGGSL--AEGGYLFIIQNDCN------LVLYDN--NRAVWASGTNGKASGCVLKMQNDGNLVIYSGSRAIWASNTNRQN   80 (112)
T ss_dssp             CTTCEE--EETTEEEEECTTSC------EEEEET--TEEEEECCCTTSCSSEEEEECTTSCEEEEETTEEEEECCCCCSC
T ss_pred             CCCCEE--eCCCEEEEEcCCCc------EEEEEC--CEEEEeCCCcCCCCCEEEEEeCCCCEEEEcCCEEEEECCccCCC
Confidence            446777  47899999998764      246764  589999999754322   56778888      479998865444


Q ss_pred             CCceEEEecCCCeEEEeccCCCCCceEEeeecCC
Q 045577          100 GSPALQLLVAGNLVLREFSLSHSEGYLWESFDSP  133 (392)
Q Consensus       100 ~~~~~~l~d~Gnlvl~~~~~~~~~~~~Wqsfd~p  133 (392)
                      +...++|+++|||||++.    .+.++||||++.
T Consensus        81 g~~~l~l~~dGnlvl~~~----~~~~~W~S~~~~  110 (112)
T 1xd5_A           81 GNYYLILQRDRNVVIYDN----SNNAIWATHTNV  110 (112)
T ss_dssp             CCCEEEECTTSCEEEECT----TSCEEEECCCCC
T ss_pred             CCEEEEEeCCCcEEEECC----CCceEEECCCcc
Confidence            556899999999999753    256899999974

>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*

Probab=99.16  E-value=6.6e-12  Score=117.15  Aligned_cols=71  Identities=20%  Similarity=0.113  Sum_probs=60.2

Q ss_pred             CCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEcCCCCCeEeeeece
Q 045577          198 DGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEINPNISDFGPA  277 (392)
Q Consensus       198 ~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~~~~~~kl~DFGla  277 (392)
                      .+..|+||||++++++.. . .      ......++.|++.||.|||+.   +|+||||||+||+++ ++.+||+|||++
T Consensus       172 ~~~~~lvmE~~~g~~L~~-l-~------~~~~~~i~~qi~~~l~~lH~~---giiHrDlkp~NILl~-~~~vkl~DFG~a  239 (282)
T 1zar_A          172 WEGNAVLMELIDAKELYR-V-R------VENPDEVLDMILEEVAKFYHR---GIVHGDLSQYNVLVS-EEGIWIIDFPQS  239 (282)
T ss_dssp             EETTEEEEECCCCEEGGG-C-C------CSCHHHHHHHHHHHHHHHHHT---TEECSCCSTTSEEEE-TTEEEECCCTTC
T ss_pred             ccceEEEEEecCCCcHHH-c-c------hhhHHHHHHHHHHHHHHHHHC---CCEeCCCCHHHEEEE-CCcEEEEECCCC
Confidence            356799999999988865 2 1      122467999999999999998   899999999999999 999999999998


Q ss_pred             EEe
Q 045577          278 RIF  280 (392)
Q Consensus       278 ~~~  280 (392)
                      +..
T Consensus       240 ~~~  242 (282)
T 1zar_A          240 VEV  242 (282)
T ss_dssp             EET
T ss_pred             eEC
Confidence            753

>3dzw_A Agglutinin; lectin, mannobiose, mannose-alpha1, 3-mannose, D sugar binding protein; HET: MAN; 1.70A {Narcissus pseudonarcissus} SCOP: b.78.1.1 PDB: 1npl_A* 1jpc_A* 1msa_A* 1niv_A*

Probab=99.09  E-value=3.8e-10  Score=89.65  Aligned_cols=86  Identities=19%  Similarity=0.188  Sum_probs=62.4

Q ss_pred             CCCcEEecCCCeEEeeecCCCCCCceEEEEEEeCCCCceEEEecCCCCccc---cccCCCCC-------ceEEEecCCCC
Q 045577           29 EVRDILLAPSTLWGGNSLIPGNSSQSFLVISYKNLPPLVIWVANRNGSINS---NLSQDNDL-------GIIWNVILPRA   98 (392)
Q Consensus        29 ~~~~~l~s~~~~f~~gf~~~~~~~~~~~~i~~~~~~~~~vW~anr~~p~~~---~~~~~~~~-------~~~w~~~~~~~   98 (392)
                      ..+++|+  +|.|.+.|...++   .+   .|..  .++||++|++.+-..   .|..||+|       .++|++++...
T Consensus        11 ~~g~~L~--~g~~~L~~q~dGn---Lv---ly~~--~~~vW~snt~~~~~~~~l~l~~dGNLvl~~~~~~~~W~S~t~~~   80 (109)
T 3dzw_A           11 SPGEFLN--NGRYVFIMQEDCN---LV---LYDV--DKPIWATNTGGLDRRCHLSMQSDGNLVVYSPRNNPIWASNTGGE   80 (109)
T ss_dssp             CTTCEEE--ETTEEEEECTTSC---EE---EEET--TEEEEECCCTTSSSSCEEEECTTSCEEEECTTSCEEEECCCCCS
T ss_pred             CCCCEEE--CCCEEEEEcCCCc---EE---EEeC--CEEEEECCcccCCCCEEEEEeCCCCEEEECCCCCEEEECCCCCC
Confidence            4466775  7899999987653   32   3654  489999999875322   56678887       48999987543


Q ss_pred             CCCceEEEecCCCeEEEeccCCCCCceEEeeec
Q 045577           99 TGSPALQLLVAGNLVLREFSLSHSEGYLWESFD  131 (392)
Q Consensus        99 ~~~~~~~l~d~Gnlvl~~~~~~~~~~~~Wqsfd  131 (392)
                      .....|+|+|+|||||++       ..+|||=-
T Consensus        81 ~~~~~~~L~ddGNlvly~-------~~~W~s~t  106 (109)
T 3dzw_A           81 NGNYVCVLQKDRNVVIYG-------TARWATGT  106 (109)
T ss_dssp             SSCEEEEECTTSCEEEEE-------SCCCCCCC
T ss_pred             CCCEEEEEeCCCEEEEEC-------CCEEeCCC
Confidence            334578999999999975       26899854

>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*

Probab=99.02  E-value=1.6e-10  Score=106.23  Aligned_cols=77  Identities=19%  Similarity=0.150  Sum_probs=56.3

Q ss_pred             CCeeEEecCccC-CCcChhhhhhhccccchhhhhHHHHHHHhhhhcC-cCCCCceeecccccceeEEcCCCCCeEeeeec
Q 045577          199 GEVFLMFEGIKL-PDKSEFTCEFECSKYSSYVTNILYGIARVILYLP-EDSRLEIIHRDHKTSNVLLDAEINPNISDFGP  276 (392)
Q Consensus       199 ~~~~lv~e~~~~-~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH-~~~~~~iiHrDlKp~NIll~~~~~~kl~DFGl  276 (392)
                      +..++||||+.. |.................+..++.|++.||.||| +.   +|+||||||+|||++.  .++|+|||+
T Consensus       141 ~~~~lVmE~~g~~g~~~~~L~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---givHrDlkp~NILl~~--~~~liDFG~  215 (258)
T 1zth_A          141 MKNVLLMEFIGEDELPAPTLVELGRELKELDVEGIFNDVVENVKRLYQEA---ELVHADLSEYNIMYID--KVYFIDMGQ  215 (258)
T ss_dssp             ETTEEEEECCEETTEECCBHHHHGGGGGGSCHHHHHHHHHHHHHHHHHTS---CEECSSCSTTSEEESS--SEEECCCTT
T ss_pred             CCCEEEEEecCCCCCccccHHHHhhccChHHHHHHHHHHHHHHHHHHHHC---CEEeCCCCHHHEEEcC--cEEEEECcc
Confidence            356899999942 3111111111000113346789999999999999 77   8999999999999998  899999999


Q ss_pred             eEEe
Q 045577          277 ARIF  280 (392)
Q Consensus       277 a~~~  280 (392)
                      +...
T Consensus       216 a~~~  219 (258)
T 1zth_A          216 AVTL  219 (258)
T ss_dssp             CEET
T ss_pred             cccC
Confidence            9764

>1xd5_A Gastrodianin-1, antifungal protein GAFP-1; monocot mannose binding lectin, monomer, homogeneous beta- sheet; 2.00A {Gastrodia elata} SCOP: b.78.1.1 PDB: 1xd6_A

Probab=98.94  E-value=3.2e-09  Score=84.73  Aligned_cols=71  Identities=17%  Similarity=0.329  Sum_probs=49.7

Q ss_pred             ceEEEecCCCCCCCceEEEecCCCeEEEeccCCCCCceEEeeecCCCCccCCCCccccccccCCcccceecccCCCCCce
Q 045577           88 GIIWNVILPRATGSPALQLLVAGNLVLREFSLSHSEGYLWESFDSPSDTILPGMKRGMNLRTGWNQNIKAWNLEKSDTPQ  167 (392)
Q Consensus        88 ~~~w~~~~~~~~~~~~~~l~d~Gnlvl~~~~~~~~~~~~Wqsfd~ptdt~l~~~~~~~~~~tg~~~~l~s~kld~~g~~~  167 (392)
                      ++||++++........++|+++|||||++ +    +.++||||+.|..    |              .....|+.+|.  
T Consensus        38 ~~vW~sn~~~~~~~~~l~l~~~GNLvl~d-~----~~~~W~S~~~~~~----g--------------~~~l~l~~dGn--   92 (112)
T 1xd5_A           38 RAVWASGTNGKASGCVLKMQNDGNLVIYS-G----SRAIWASNTNRQN----G--------------NYYLILQRDRN--   92 (112)
T ss_dssp             EEEEECCCTTSCSSEEEEECTTSCEEEEE-T----TEEEEECCCCCSC----C--------------CCEEEECTTSC--
T ss_pred             EEEEeCCCcCCCCCEEEEEeCCCCEEEEc-C----CEEEEECCccCCC----C--------------CEEEEEeCCCc--
Confidence            58999997543335689999999999987 3    5799999987641    1              01223566654  


Q ss_pred             EEEEe-CCcceEee--ecC
Q 045577          168 LVLWR-RTEKVFRS--WNG  183 (392)
Q Consensus       168 l~~~~-~~~~~w~~--W~g  183 (392)
                      +++|. ....||++  |+|
T Consensus        93 lvl~~~~~~~~W~S~~~~g  111 (112)
T 1xd5_A           93 VVIYDNSNNAIWATHTNVG  111 (112)
T ss_dssp             EEEECTTSCEEEECCCCCC
T ss_pred             EEEECCCCceEEECCCccC
Confidence            66665 45679998  765

>3a0c_A Mannose/sialic acid-binding lectin; beta-prism II, sugar binding protein; 2.00A {Polygonatum cyrtonema} PDB: 3a0d_A* 3a0e_A*

Probab=98.83  E-value=8.1e-09  Score=82.05  Aligned_cols=43  Identities=21%  Similarity=0.313  Sum_probs=33.9

Q ss_pred             ceEEEecCCCCCCCceEEEecCCCeEEEeccCCCCCceEEeeecCCC
Q 045577           88 GIIWNVILPRATGSPALQLLVAGNLVLREFSLSHSEGYLWESFDSPS  134 (392)
Q Consensus        88 ~~~w~~~~~~~~~~~~~~l~d~Gnlvl~~~~~~~~~~~~Wqsfd~pt  134 (392)
                      ++||++|+........++|+|+|||||++.+    +.++||||..|.
T Consensus        39 ~~vW~sn~~~~~~~~~l~l~~dGNLVl~~~~----~~~~W~S~t~~~   81 (110)
T 3a0c_A           39 KPVWASNTGGLGSGCRLTLHNNGNLVIYDQS----NRVIWQTKTNGK   81 (110)
T ss_dssp             EEEEECCCTTSCSSCEEEECTTSCEEEECTT----CCEEEECCCCCS
T ss_pred             EEEEECCCCCCCCcEEEEEeCCCCEEEECCC----CcEEEecCCCCC
Confidence            5799999754434568999999999998643    679999997664

>2dpf_A Curculin; sweet taste, taste modifying, plant protein; 1.50A {Curculigo latifolia} PDB: 2d04_B* 2d04_A*

Probab=98.82  E-value=1.1e-08  Score=81.94  Aligned_cols=69  Identities=23%  Similarity=0.304  Sum_probs=48.1

Q ss_pred             ceEEEecCCCCCCCceEEEecCCCeEEEeccCCCCCceEEeeecCCCCccCCCCccccccccCCcccceecccCCCCCce
Q 045577           88 GIIWNVILPRATGSPALQLLVAGNLVLREFSLSHSEGYLWESFDSPSDTILPGMKRGMNLRTGWNQNIKAWNLEKSDTPQ  167 (392)
Q Consensus        88 ~~~w~~~~~~~~~~~~~~l~d~Gnlvl~~~~~~~~~~~~Wqsfd~ptdt~l~~~~~~~~~~tg~~~~l~s~kld~~g~~~  167 (392)
                      +++|++|+........++|+++|||||++.+    +.++||||++|..-                  .....|+.+|.  
T Consensus        39 ~~vW~sn~~~~~~~~~l~l~~~GnLvl~d~~----~~~vW~S~~~~~~g------------------~~~l~l~~dGn--   94 (115)
T 2dpf_A           39 RQIWASNTDRRGSGCRLTLLSDGNLVIYDHN----NNDVWGSACWGDNG------------------KYALVLQKDGR--   94 (115)
T ss_dssp             EEEEECSCTTSCSSCEEEECTTSCEEEECTT----CCEEEECCCCCSSS------------------CCEEEECTTSC--
T ss_pred             EEEEeCCCCCCCCceEEEECCCCcEEEECCC----ceEEEEcCCCCCCC------------------CEEEEEeCCCe--
Confidence            5899999754434568999999999998643    56999999986411                  01223666664  


Q ss_pred             EEEEeCCcceEee--ec
Q 045577          168 LVLWRRTEKVFRS--WN  182 (392)
Q Consensus       168 l~~~~~~~~~w~~--W~  182 (392)
                      +++++.  .+|++  |.
T Consensus        95 lvl~~~--~~W~S~~~~  109 (115)
T 2dpf_A           95 FVIYGP--VLWSLGPNG  109 (115)
T ss_dssp             EEEECS--EEECSSTTC
T ss_pred             EEEECC--CEEECCCCC
Confidence            666654  78987  64

>3mez_B Mannose-specific lectin 3 chain 2; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} SCOP: b.78.1.0

Probab=98.80  E-value=3.6e-08  Score=78.66  Aligned_cols=84  Identities=18%  Similarity=0.251  Sum_probs=57.3

Q ss_pred             CcEEecCCCeEEeeecCCCCCCceEEEEEEeCCCCceEEEecCCCCccc---cccCCCCC-------ceEEEecCCCCCC
Q 045577           31 RDILLAPSTLWGGNSLIPGNSSQSFLVISYKNLPPLVIWVANRNGSINS---NLSQDNDL-------GIIWNVILPRATG  100 (392)
Q Consensus        31 ~~~l~s~~~~f~~gf~~~~~~~~~~~~i~~~~~~~~~vW~anr~~p~~~---~~~~~~~~-------~~~w~~~~~~~~~  100 (392)
                      ++.|.  +|.|.+-+-..++     |.+ |.....++||.+|+..+..+   .|..+|+|       .++|++++....+
T Consensus        18 g~~L~--~g~~~L~~q~dGN-----LvL-~~~~~~~~vWssnt~~~~~~~~l~l~~dGNLVl~d~~~~~iW~S~t~~~~~   89 (113)
T 3mez_B           18 NAQLA--TRDYSLVMRDDCN-----LVL-TKGSKTNIVWESGTSGRGQHCFMRLGHSGELDITDDRLNTVFVSNTVGQEG   89 (113)
T ss_dssp             TCEEE--ETTEEEEECTTSC-----EEE-EETTTTEEEEECCCTTSCSSCEEEECTTSCEEEECTTSCEEEECSCCCSSS
T ss_pred             CCEeE--cCCEEEEEcCCCE-----EEE-EECCCCEEEEECCcccCCcCEEEEEeCCCcEEEECCCCCEEEECCCcCCCC
Confidence            44444  3667777654432     333 44323489999999865433   56678887       5799998754344


Q ss_pred             CceEEEecCCCeEEEeccCCCCCceEEee
Q 045577          101 SPALQLLVAGNLVLREFSLSHSEGYLWES  129 (392)
Q Consensus       101 ~~~~~l~d~Gnlvl~~~~~~~~~~~~Wqs  129 (392)
                      ...|.|+|+|||||++       ..+|+|
T Consensus        90 ~~~~~L~~dGnlvly~-------~~~W~s  111 (113)
T 3mez_B           90 DYVLILQINGQAVVYG-------PAVWST  111 (113)
T ss_dssp             CCEEEECTTSCEEEEC-------SEEEES
T ss_pred             CEEEEEcCCceEEEec-------CCEecC
Confidence            5689999999999974       479997

>1b2p_A Protein (lectin); mannose-binding lectin, monocot, aglutinin, bluebell bulbs, carbohydrate interactions, sugar binding protein; 1.70A {Hyacinthoides hispanica} SCOP: b.78.1.1

Probab=98.79  E-value=1.7e-08  Score=81.27  Aligned_cols=43  Identities=19%  Similarity=0.142  Sum_probs=34.1

Q ss_pred             ceEEEecCCCCCCCceEEEecCCCeEEEeccCCCCCceEEeeecCCC
Q 045577           88 GIIWNVILPRATGSPALQLLVAGNLVLREFSLSHSEGYLWESFDSPS  134 (392)
Q Consensus        88 ~~~w~~~~~~~~~~~~~~l~d~Gnlvl~~~~~~~~~~~~Wqsfd~pt  134 (392)
                      ++||++|+........++|+|+|||||++.+    +.++||||..|.
T Consensus        49 ~~vW~sn~~~~~~~~~l~l~~dGNLVl~d~~----~~~lW~S~~~~~   91 (119)
T 1b2p_A           49 NPIWATNTGGLGNGCRAVLQPDGVLVVITNE----NVTVWQSPVAGK   91 (119)
T ss_dssp             EEEEECCCTTSCSSCEEEECTTSCEEEECTT----CCEEEECSCCCC
T ss_pred             EEEEeCCCccCCCceEEEEccCCEEEEEeCC----CcEEEcCCCCCC
Confidence            5899999754433568999999999998643    679999997764

>3r0e_B Lectin; carbohydrate binding, carbohydrate, sugar binding protein; 2.40A {Remusatia vivipara}

Probab=98.79  E-value=2.4e-08  Score=79.25  Aligned_cols=83  Identities=22%  Similarity=0.195  Sum_probs=56.9

Q ss_pred             CCCcEEecCCCeEEeeecCCCCCCceEEEEEEeCCCCceEEEecCCCCccc---cccCCCCC-------ceEEEecCCCC
Q 045577           29 EVRDILLAPSTLWGGNSLIPGNSSQSFLVISYKNLPPLVIWVANRNGSINS---NLSQDNDL-------GIIWNVILPRA   98 (392)
Q Consensus        29 ~~~~~l~s~~~~f~~gf~~~~~~~~~~~~i~~~~~~~~~vW~anr~~p~~~---~~~~~~~~-------~~~w~~~~~~~   98 (392)
                      ..++.|+|.  .|.+-|-..+   +  |.+ |..   ++||++|++..-..   .|..+|+|       .++|++++...
T Consensus        16 ~~g~~L~sg--~~~L~~q~dG---n--Lvl-~~~---~~vW~snt~~~~~~~~l~l~~dGNLvl~d~~~~~iW~S~t~~~   84 (110)
T 3r0e_B           16 YGDGRLTAK--NHQLVMQGDC---N--LVL-YGG---KYGWQSNTHGNGEHCFLRLNHKGELIIKDDDFKTIWSSRSSSK   84 (110)
T ss_dssp             ETTEEEECS--SCEEEECTTS---C--EEE-ECS---SSCEECCCTTSSSSCEEEECTTSCEEEECTTCCEEEECCCCCS
T ss_pred             cCCCEEEeC--CEEEEEcCCC---e--EEE-ECC---eEEEECCCcCCCcCEEEEEeCCCcEEEEeCCCCEEEEcCCcCC
Confidence            446777774  4777554333   2  233 654   57999999753222   56678887       57999987443


Q ss_pred             CCCceEEEecCCCeEEEeccCCCCCceEEee
Q 045577           99 TGSPALQLLVAGNLVLREFSLSHSEGYLWES  129 (392)
Q Consensus        99 ~~~~~~~l~d~Gnlvl~~~~~~~~~~~~Wqs  129 (392)
                      .+...|+|+|+|||||++       ..+|+|
T Consensus        85 ~~~~~~~L~~dGNlvly~-------~~~W~t  108 (110)
T 3r0e_B           85 QGEYVLILQDDGFGVIYG-------PAIFET  108 (110)
T ss_dssp             SSCCEEEECTTSCEEEEC-------SEEEES
T ss_pred             CCCEEEEEcCCccEEEec-------CCEecC
Confidence            445689999999999974       369987

>3r0e_A Lectin; carbohydrate binding, carbohydrate, sugar binding protein; 2.40A {Remusatia vivipara}

Probab=98.53  E-value=3.6e-07  Score=72.26  Aligned_cols=79  Identities=16%  Similarity=0.213  Sum_probs=54.6

Q ss_pred             CcEEecCCCeEEeeecCCCCCCceEEEEEEeCCCCceEEEecCCCCccc---cccCCCCC-------ceEEEecCCCCCC
Q 045577           31 RDILLAPSTLWGGNSLIPGNSSQSFLVISYKNLPPLVIWVANRNGSINS---NLSQDNDL-------GIIWNVILPRATG  100 (392)
Q Consensus        31 ~~~l~s~~~~f~~gf~~~~~~~~~~~~i~~~~~~~~~vW~anr~~p~~~---~~~~~~~~-------~~~w~~~~~~~~~  100 (392)
                      ++.|  .+|.|.+.+...++      -+.|..     +|.+|+..+-.+   .+..||+|       .++|++++.....
T Consensus        15 g~~L--~~g~~~L~~q~dGN------Lvl~~~-----~Wssnt~~~~~~~~l~l~~dGnLvl~d~~~~~vWss~t~~~~~   81 (109)
T 3r0e_A           15 EGHL--KNGDFDLVMQDDCN------LVLYNG-----NWQSNTANNGRDCKLTLTDYGELVIKNGDGSTVWKSGAQSVKG   81 (109)
T ss_dssp             TCEE--EETTEEEEECTTSC------EEEETT-----TEECCCTTSCSSCEEEECTTSCEEEECTTSCEEEECCCCCSSS
T ss_pred             CCEe--ECCCEEEEEecCCe------EEEEeC-----eEEcCCCCCCCcEEEEEcCCCeEEEEeCCCCEEEcCCCcCCCc
Confidence            4444  46888887765443      233442     699998764322   56678887       5799998754334


Q ss_pred             CceEEEecCCCeEEEeccCCCCCceEEee
Q 045577          101 SPALQLLVAGNLVLREFSLSHSEGYLWES  129 (392)
Q Consensus       101 ~~~~~l~d~Gnlvl~~~~~~~~~~~~Wqs  129 (392)
                      ...|+|+|+|||||++       ..+|+|
T Consensus        82 ~~~~~L~~dGNlvly~-------~~~W~s  103 (109)
T 3r0e_A           82 NYAAVVHPDGRLVVFG-------PSVFKI  103 (109)
T ss_dssp             CCEEEEETTTEEEEEC-------SEEEEE
T ss_pred             CEEEEEcCCCeEEEEe-------cCEECC
Confidence            5689999999999974       469998

>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A

Probab=98.51  E-value=2.1e-08  Score=97.09  Aligned_cols=71  Identities=17%  Similarity=0.236  Sum_probs=55.3

Q ss_pred             CeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEcCCCC----------C
Q 045577          200 EVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEIN----------P  269 (392)
Q Consensus       200 ~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~~~~~----------~  269 (392)
                      +.++||||+++..+....       .......++.|++.+|.|||+.   +||||||||.|||+++++.          +
T Consensus       185 ~~~LVME~i~G~~L~~l~-------~~~~~~~l~~qll~~l~~lH~~---gIVHrDLKp~NILl~~dgd~~d~~~~~~~~  254 (397)
T 4gyi_A          185 RHTIVMSLVDALPMRQVS-------SVPDPASLYADLIALILRLAKH---GLIHGDFNEFNILIREEKDAEDPSSITLTP  254 (397)
T ss_dssp             TTEEEEECCSCEEGGGCC-------CCSCHHHHHHHHHHHHHHHHHT---TEECSCCSTTSEEEEEEECSSCTTSEEEEE
T ss_pred             CceEEEEecCCccHhhhc-------ccHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHEEEeCCCCcccccccccce
Confidence            457999999877664321       1112456889999999999997   8999999999999987763          7


Q ss_pred             eEeeeeceEEe
Q 045577          270 NISDFGPARIF  280 (392)
Q Consensus       270 kl~DFGla~~~  280 (392)
                      .|+||+-+...
T Consensus       255 ~iID~~Q~V~~  265 (397)
T 4gyi_A          255 IIIXFPQMVSM  265 (397)
T ss_dssp             EECCCTTCEET
T ss_pred             EEEEeCCcccC
Confidence            89999866543

>3mez_A Mannose-specific lectin 3 chain 1; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} SCOP: b.78.1.0

Probab=98.19  E-value=6.2e-06  Score=65.29  Aligned_cols=81  Identities=15%  Similarity=0.117  Sum_probs=54.1

Q ss_pred             CcEEecCCCeEEeeecCCCCCCceEEEEEEeCCCCceEEEecCCCCccc---cccCCCCC-------c-eEEEecCCC--
Q 045577           31 RDILLAPSTLWGGNSLIPGNSSQSFLVISYKNLPPLVIWVANRNGSINS---NLSQDNDL-------G-IIWNVILPR--   97 (392)
Q Consensus        31 ~~~l~s~~~~f~~gf~~~~~~~~~~~~i~~~~~~~~~vW~anr~~p~~~---~~~~~~~~-------~-~~w~~~~~~--   97 (392)
                      ++.|  .+|.|.+-+-..++   .   +.|.. . . ||.+|+..+..+   .|..+|+|       . .+|++++..  
T Consensus        14 g~~L--~~g~~~L~~q~dGn---L---vl~~~-~-~-vW~snt~~~~~~~~l~l~~dGNLVl~~~~~~~~vW~S~t~~~~   82 (111)
T 3mez_A           14 DNQL--SYESAAFVMQGDCN---L---VLYNE-A-G-GFQSNTHGRGVDCTLRLNNRGQLEIHSANSNTPVWVYPRSVNT   82 (111)
T ss_dssp             TCEE--EETTEEEEECTTSC---E---EEECS-S-C-CEECCCTTSCSSCEEEECTTSCEEEECSSCSSCSEEESSSCCC
T ss_pred             CCEE--ecCCEEEEEccCCe---E---EEECC-C-C-EEECCcccCCcCEEEEEcCCCcEEEEeCCCCEEEEEeccccCC
Confidence            4455  35778887754432   2   33543 2 4 999999765432   56778888       2 499998532  


Q ss_pred             CCCCceEEEecCCCeEEEeccCCCCCceEEee
Q 045577           98 ATGSPALQLLVAGNLVLREFSLSHSEGYLWES  129 (392)
Q Consensus        98 ~~~~~~~~l~d~Gnlvl~~~~~~~~~~~~Wqs  129 (392)
                      ..+...+.|+++|||||++       ..+|+|
T Consensus        83 ~~~~~~l~Lq~dGNlvly~-------~~~W~s  107 (111)
T 3mez_A           83 VRGNYAATLGPDQHVTIYG-------PAIWST  107 (111)
T ss_dssp             CSSCCEEEECTTSCEEEEC-------SEEEEC
T ss_pred             CCcCEEEEECCCCeEEEec-------cCEEcc
Confidence            2234678999999999974       469987

>3m7h_A Putidacin L1; monocot mannose-binding lectin, bacteriocin, LLPA, pseudomon bacterial toxin, siras, antimicrobial protein; 2.20A {Pseudomonas SP} PDB: 3m7j_A*

Probab=98.14  E-value=4.4e-06  Score=77.13  Aligned_cols=91  Identities=16%  Similarity=0.307  Sum_probs=60.8

Q ss_pred             CCcEEecCCCeEEeeecCCC--CCCceEEEEEEeCCCCceEEEecCCCCccc--cccCCCCC-------ceEEEecCCCC
Q 045577           30 VRDILLAPSTLWGGNSLIPG--NSSQSFLVISYKNLPPLVIWVANRNGSINS--NLSQDNDL-------GIIWNVILPRA   98 (392)
Q Consensus        30 ~~~~l~s~~~~f~~gf~~~~--~~~~~~~~i~~~~~~~~~vW~anr~~p~~~--~~~~~~~~-------~~~w~~~~~~~   98 (392)
                      .++.|.| ...++-|+|...  .+.+.++   |.+ ..+++|.+++.++-..  .+..+|+|       ..+|++++.. 
T Consensus       151 ~g~~L~S-~~dps~G~fsl~l~~dGnlvL---y~~-~~~~yW~Sgt~~~~~~~l~l~~dGnLvl~d~~~~~vWsS~t~~-  224 (276)
T 3m7h_A          151 PGSELVQ-GVVYGAGASKLVFQGDGNLVA---YGP-NGAATWNAGTQGKGAVRAVFQGDGNLVVYGAGNAVLWHSHTGG-  224 (276)
T ss_dssp             SSEEECT-TCEEEETTEEEEECTTSCEEE---ECT-TSSEEEECCCTTTTCCEEEECTTSCEEEECTTSCEEEECSCTT-
T ss_pred             cCccccc-CCCCCCceEEEeecCCceEEE---EeC-CCeEEEECCCCCCccEEEEEcCCCeEEEEeCCCcEEEEecCCC-
Confidence            3455644 456667766532  2224433   432 2478999999865422  45567776       4799998643 


Q ss_pred             CCCceEEEecCCCeEEEeccCCCCCceEEeeecC
Q 045577           99 TGSPALQLLVAGNLVLREFSLSHSEGYLWESFDS  132 (392)
Q Consensus        99 ~~~~~~~l~d~Gnlvl~~~~~~~~~~~~Wqsfd~  132 (392)
                      .....+.|+++|||||++.      ..+|||||+
T Consensus       225 ~~~~rl~Ld~dGnLvly~~------~~~Wqsf~~  252 (276)
T 3m7h_A          225 HASAVLRLQANGSIAILDE------KPVWARFGF  252 (276)
T ss_dssp             CTTCEEEECTTSCEEEEEE------EEEEESSSC
T ss_pred             CCCEEEEEcCCccEEEEcC------CCeEEccCc
Confidence            3357899999999999752      479999997

>3mez_B Mannose-specific lectin 3 chain 2; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} SCOP: b.78.1.0

Probab=98.00  E-value=6.2e-06  Score=65.53  Aligned_cols=40  Identities=15%  Similarity=0.147  Sum_probs=30.8

Q ss_pred             ceEEEecCCCCCCCceEEEecCCCeEEEeccCCCCCceEEeeec
Q 045577           88 GIIWNVILPRATGSPALQLLVAGNLVLREFSLSHSEGYLWESFD  131 (392)
Q Consensus        88 ~~~w~~~~~~~~~~~~~~l~d~Gnlvl~~~~~~~~~~~~Wqsfd  131 (392)
                      .++|++++........+.|+++|||||++.+    +.++|||-.
T Consensus        45 ~~vWssnt~~~~~~~~l~l~~dGNLVl~d~~----~~~iW~S~t   84 (113)
T 3mez_B           45 NIVWESGTSGRGQHCFMRLGHSGELDITDDR----LNTVFVSNT   84 (113)
T ss_dssp             EEEEECCCTTSCSSCEEEECTTSCEEEECTT----SCEEEECSC
T ss_pred             EEEEECCcccCCcCEEEEEeCCCcEEEECCC----CCEEEECCC
Confidence            4799999754333568899999999998643    568999854

>3mez_A Mannose-specific lectin 3 chain 1; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} SCOP: b.78.1.0

Probab=97.94  E-value=1.8e-05  Score=62.58  Aligned_cols=39  Identities=15%  Similarity=0.070  Sum_probs=29.3

Q ss_pred             EEEecCCCCCCCceEEEecCCCeEEEeccCCCCCceEEeeec
Q 045577           90 IWNVILPRATGSPALQLLVAGNLVLREFSLSHSEGYLWESFD  131 (392)
Q Consensus        90 ~w~~~~~~~~~~~~~~l~d~Gnlvl~~~~~~~~~~~~Wqsfd  131 (392)
                      +|++++........++|+++|||||++.+   ...++|+|..
T Consensus        40 vW~snt~~~~~~~~l~l~~dGNLVl~~~~---~~~~vW~S~t   78 (111)
T 3mez_A           40 GFQSNTHGRGVDCTLRLNNRGQLEIHSAN---SNTPVWVYPR   78 (111)
T ss_dssp             CEECCCTTSCSSCEEEECTTSCEEEECSS---CSSCSEEESS
T ss_pred             EEECCcccCCcCEEEEEcCCCcEEEEeCC---CCEEEEEecc
Confidence            99999754333468899999999998643   2345999984

>3dzw_A Agglutinin; lectin, mannobiose, mannose-alpha1, 3-mannose, D sugar binding protein; HET: MAN; 1.70A {Narcissus pseudonarcissus} SCOP: b.78.1.1 PDB: 1npl_A* 1jpc_A* 1msa_A* 1niv_A*

Probab=97.90  E-value=1.3e-05  Score=63.11  Aligned_cols=41  Identities=22%  Similarity=0.278  Sum_probs=31.5

Q ss_pred             ceEEEecCCCCCCCceEEEecCCCeEEEeccCCCCCceEEeeecC
Q 045577           88 GIIWNVILPRATGSPALQLLVAGNLVLREFSLSHSEGYLWESFDS  132 (392)
Q Consensus        88 ~~~w~~~~~~~~~~~~~~l~d~Gnlvl~~~~~~~~~~~~Wqsfd~  132 (392)
                      .++|++++........+.|+++|||||++.+    +.++|||...
T Consensus        38 ~~vW~snt~~~~~~~~l~l~~dGNLvl~~~~----~~~~W~S~t~   78 (109)
T 3dzw_A           38 KPIWATNTGGLDRRCHLSMQSDGNLVVYSPR----NNPIWASNTG   78 (109)
T ss_dssp             EEEEECCCTTSSSSCEEEECTTSCEEEECTT----SCEEEECCCC
T ss_pred             EEEEECCcccCCCCEEEEEeCCCCEEEECCC----CCEEEECCCC
Confidence            5899999754333468899999999998643    5789998753

>3r0e_B Lectin; carbohydrate binding, carbohydrate, sugar binding protein; 2.40A {Remusatia vivipara}

Probab=97.85  E-value=1.5e-05  Score=62.90  Aligned_cols=39  Identities=18%  Similarity=0.236  Sum_probs=30.3

Q ss_pred             eEEEecCCCCCCCceEEEecCCCeEEEeccCCCCCceEEeeec
Q 045577           89 IIWNVILPRATGSPALQLLVAGNLVLREFSLSHSEGYLWESFD  131 (392)
Q Consensus        89 ~~w~~~~~~~~~~~~~~l~d~Gnlvl~~~~~~~~~~~~Wqsfd  131 (392)
                      ++|++++........++|+++|||||++.+    +.++|||-.
T Consensus        43 ~vW~snt~~~~~~~~l~l~~dGNLvl~d~~----~~~iW~S~t   81 (110)
T 3r0e_B           43 YGWQSNTHGNGEHCFLRLNHKGELIIKDDD----FKTIWSSRS   81 (110)
T ss_dssp             SCEECCCTTSSSSCEEEECTTSCEEEECTT----CCEEEECCC
T ss_pred             EEEECCCcCCCcCEEEEEeCCCcEEEEeCC----CCEEEEcCC
Confidence            699999754333468899999999998643    578999975

>4h3o_A Lectin; cadmium, plant protein; 2.17A {Allium sativum} PDB: 1kj1_A* 1bwu_P* 1kj1_D* 1bwu_Q* 1bwu_A* 1bwu_D*

Probab=97.51  E-value=0.00013  Score=57.03  Aligned_cols=39  Identities=23%  Similarity=0.288  Sum_probs=29.9

Q ss_pred             ceEEEecCCCCC-CCceEEEecCCCeEEEeccCCCCCceEEeee
Q 045577           88 GIIWNVILPRAT-GSPALQLLVAGNLVLREFSLSHSEGYLWESF  130 (392)
Q Consensus        88 ~~~w~~~~~~~~-~~~~~~l~d~Gnlvl~~~~~~~~~~~~Wqsf  130 (392)
                      ++||++|+.... ....+.|.++|||||.+.+    +.++|+|-
T Consensus        38 ~~vW~ant~~~~~~~~~L~l~~dGnLvL~d~~----~~~vWss~   77 (105)
T 4h3o_A           38 TSTWASNTEIGGKSGCSAVLQSDGNFVVYDSS----GRSLWASH   77 (105)
T ss_dssp             EEEEECCCCCTTCCSCEEEECTTSCEEEECTT----CCEEEECC
T ss_pred             EEEEEecCCCCCCccEEEEEeCCccEEEECCC----cEEEEEec
Confidence            479999975432 3457899999999997644    67899984

>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6

Probab=97.48  E-value=6.9e-05  Score=67.46  Aligned_cols=30  Identities=17%  Similarity=0.267  Sum_probs=25.9

Q ss_pred             ceeecccccceeEEcCCCCCeEeeeeceEE
Q 045577          250 EIIHRDHKTSNVLLDAEINPNISDFGPARI  279 (392)
Q Consensus       250 ~iiHrDlKp~NIll~~~~~~kl~DFGla~~  279 (392)
                      .++|+|++|.||+++.+...+|.||+.+..
T Consensus       185 ~l~HgDl~~~Nil~~~~~~~~liD~~~a~~  214 (264)
T 1nd4_A          185 VVTHGDACLPNIMVENGRFSGFIDCGRLGV  214 (264)
T ss_dssp             EEECSSCCGGGEEEETTEEEEECCCTTCEE
T ss_pred             EEECCCCCCCcEEEECCcEEEEEcchhccc
Confidence            499999999999998776667999998764

>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*

Probab=97.43  E-value=4.8e-05  Score=69.05  Aligned_cols=75  Identities=19%  Similarity=0.074  Sum_probs=53.3

Q ss_pred             CCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcC--------------------------------
Q 045577          199 GEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPED--------------------------------  246 (392)
Q Consensus       199 ~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~--------------------------------  246 (392)
                      +..|++||++++..+....      ........++.+++++|..||+-                                
T Consensus        83 ~~~~lv~e~i~G~~l~~~~------~~~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  156 (263)
T 3tm0_A           83 GWSNLLMSEADGVLCSEEY------EDEQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCE  156 (263)
T ss_dssp             TEEEEEEECCSSEEHHHHC------CTTTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCSGG
T ss_pred             CceEEEEEecCCeehhhcc------CCcccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhccccccccc
Confidence            5679999999987764321      00111345677888888888871                                


Q ss_pred             ------------------------CCCceeecccccceeEEcCCCCCeEeeeeceEE
Q 045577          247 ------------------------SRLEIIHRDHKTSNVLLDAEINPNISDFGPARI  279 (392)
Q Consensus       247 ------------------------~~~~iiHrDlKp~NIll~~~~~~kl~DFGla~~  279 (392)
                                              ....++|+|+++.||+++.+....|.||+.+..
T Consensus       157 ~~~~~~~~~~~~~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~lIDwe~a~~  213 (263)
T 3tm0_A          157 NWEEDTPFKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSGR  213 (263)
T ss_dssp             GGSTTCSSSSHHHHHHHHHHCCCCCCEEEECSSCCTTSEEEETTEEEEECCCTTCEE
T ss_pred             cccccccCCCHHHHHHHHHhcCCCCCceEECCCCCcCcEEEECCcEEEEEEchhccc
Confidence                                    114699999999999998765567999987654

>3r0e_A Lectin; carbohydrate binding, carbohydrate, sugar binding protein; 2.40A {Remusatia vivipara}

Probab=97.40  E-value=0.00015  Score=57.08  Aligned_cols=46  Identities=22%  Similarity=0.273  Sum_probs=32.9

Q ss_pred             ccCCCCCc---eEEEecCCCCCCCceEEEecCCCeEEEeccCCCCCceEEeee
Q 045577           81 LSQDNDLG---IIWNVILPRATGSPALQLLVAGNLVLREFSLSHSEGYLWESF  130 (392)
Q Consensus        81 ~~~~~~~~---~~w~~~~~~~~~~~~~~l~d~Gnlvl~~~~~~~~~~~~Wqsf  130 (392)
                      +..||+|.   .+|++++........++|.++|||||++.+    +.++|+|-
T Consensus        27 ~q~dGNLvl~~~~Wssnt~~~~~~~~l~l~~dGnLvl~d~~----~~~vWss~   75 (109)
T 3r0e_A           27 MQDDCNLVLYNGNWQSNTANNGRDCKLTLTDYGELVIKNGD----GSTVWKSG   75 (109)
T ss_dssp             ECTTSCEEEETTTEECCCTTSCSSCEEEECTTSCEEEECTT----SCEEEECC
T ss_pred             EecCCeEEEEeCeEEcCCCCCCCcEEEEEcCCCeEEEEeCC----CCEEEcCC
Confidence            34566662   379999754333568899999999998643    57899764

>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}

Probab=97.30  E-value=0.0002  Score=68.30  Aligned_cols=31  Identities=16%  Similarity=0.325  Sum_probs=26.5

Q ss_pred             CceeecccccceeEEcCCCC--CeEeeeeceEE
Q 045577          249 LEIIHRDHKTSNVLLDAEIN--PNISDFGPARI  279 (392)
Q Consensus       249 ~~iiHrDlKp~NIll~~~~~--~kl~DFGla~~  279 (392)
                      ..++|+|+++.||+++.++.  +.|.||+.+..
T Consensus       216 ~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~  248 (359)
T 3dxp_A          216 TSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTL  248 (359)
T ss_dssp             CEEECSSCSGGGEEECSSSSCEEEECCCTTCEE
T ss_pred             ceEEeCCCCCCcEEEeCCCCcEEEEECcccccc
Confidence            47999999999999987653  58999998865

>1dlp_A Lectin scafet precursor; two-domain lectin, beta prism II fold, native, sugar binding protein; 3.30A {Hyacinthoides hispanica} SCOP: b.78.1.1 b.78.1.1

Probab=97.16  E-value=0.00014  Score=65.35  Aligned_cols=40  Identities=20%  Similarity=0.166  Sum_probs=32.0

Q ss_pred             ceEEEecCCCCCCCceEEEecCCCeEEEeccCCCCCceEEeeecC
Q 045577           88 GIIWNVILPRATGSPALQLLVAGNLVLREFSLSHSEGYLWESFDS  132 (392)
Q Consensus        88 ~~~w~~~~~~~~~~~~~~l~d~Gnlvl~~~~~~~~~~~~Wqsfd~  132 (392)
                      ++||++|+... ....++|.++|||||.+.+    +.+||+|+.+
T Consensus        45 ~~vW~an~~~~-~~~~l~l~~dGnLvl~d~~----~~~vW~s~~~   84 (236)
T 1dlp_A           45 VRVWASNTAGA-TGCRAVLQSDGLLVILTAQ----NTIRWSSGTK   84 (236)
T ss_dssp             SEEECCCCCSC-SCCBCCBCSSSCBCCBCTT----TCCSCCCCCC
T ss_pred             EEEEECCCCCC-CCeEEEEcCCCcEEEEcCC----CcEEEeCCcc
Confidence            58999997544 5567899999999997643    6789999875

>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A

Probab=96.22  E-value=0.0026  Score=58.99  Aligned_cols=31  Identities=35%  Similarity=0.544  Sum_probs=26.6

Q ss_pred             CceeecccccceeEEcC--CCCCeEeeeeceEE
Q 045577          249 LEIIHRDHKTSNVLLDA--EINPNISDFGPARI  279 (392)
Q Consensus       249 ~~iiHrDlKp~NIll~~--~~~~kl~DFGla~~  279 (392)
                      ..++|+|+++.||+++.  ...+.|.||+.+..
T Consensus       191 ~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~  223 (304)
T 3sg8_A          191 PCLIHNDFSSDHILFDTEKNTICGIIDFGDAAI  223 (304)
T ss_dssp             CEEECSCCCGGGEEEETTTTEEEEECCCTTCEE
T ss_pred             ceeEeCCCCcccEEEeCCCCCEEEEEeCCCCcc
Confidence            47899999999999988  45578999998865

>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*

Probab=94.42  E-value=0.033  Score=51.57  Aligned_cols=31  Identities=32%  Similarity=0.482  Sum_probs=25.6

Q ss_pred             CceeecccccceeEEcC---CCC-CeEeeeeceEE
Q 045577          249 LEIIHRDHKTSNVLLDA---EIN-PNISDFGPARI  279 (392)
Q Consensus       249 ~~iiHrDlKp~NIll~~---~~~-~kl~DFGla~~  279 (392)
                      ..++|+|+++.||+++.   ++. ..|.||+.+..
T Consensus       190 ~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~  224 (306)
T 3tdw_A          190 PRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAI  224 (306)
T ss_dssp             CEEECSCCSGGGEEECTTCSSCCEEEECCCTTCEE
T ss_pred             CeeEeCCCCcccEEEecCCCCCceEEEEehhhcCC
Confidence            46899999999999987   455 47999998765

>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*

Probab=93.08  E-value=0.11  Score=48.72  Aligned_cols=32  Identities=16%  Similarity=0.181  Sum_probs=26.3

Q ss_pred             CCceeecccccceeEEcCCCCCeEeeeeceEE
Q 045577          248 RLEIIHRDHKTSNVLLDAEINPNISDFGPARI  279 (392)
Q Consensus       248 ~~~iiHrDlKp~NIll~~~~~~kl~DFGla~~  279 (392)
                      ...++|+|+.+.||+++++..+.|.||+.+..
T Consensus       221 ~~~l~HgDl~~~Nil~~~~~~~~vIDwe~a~~  252 (357)
T 3ats_A          221 EPVLLWGDARVGNVLYRDFQPVAVLDWEMVAL  252 (357)
T ss_dssp             CCEEECSSCSGGGEEEETTEEEEECCGGGCEE
T ss_pred             CceEEeCCCCCCeEEEeCCcEEEEEccccccc
Confidence            34799999999999998644468999998764

>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}

Probab=91.38  E-value=0.07  Score=49.54  Aligned_cols=32  Identities=22%  Similarity=0.268  Sum_probs=27.9

Q ss_pred             CCceeecccccceeEEcCCCCCeEeeeeceEE
Q 045577          248 RLEIIHRDHKTSNVLLDAEINPNISDFGPARI  279 (392)
Q Consensus       248 ~~~iiHrDlKp~NIll~~~~~~kl~DFGla~~  279 (392)
                      ...++|+|+++.||+++.++.+.|.||+.+..
T Consensus       221 ~~~l~HgD~~~~Nil~~~~~~~~lIDfe~a~~  252 (346)
T 2q83_A          221 SPNLCHQDYGTGNTLLGENEQIWVIDLDTVSF  252 (346)
T ss_dssp             SCCEECSSCSTTSEEECGGGCEEECCCTTCEE
T ss_pred             cCceecCCCCcccEEEeCCCcEEEEehhhccc
Confidence            34799999999999998778899999998754

>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}

Probab=87.10  E-value=0.5  Score=45.57  Aligned_cols=30  Identities=20%  Similarity=0.243  Sum_probs=26.6

Q ss_pred             CceeecccccceeEEcCCCCCeEeeeeceEE
Q 045577          249 LEIIHRDHKTSNVLLDAEINPNISDFGPARI  279 (392)
Q Consensus       249 ~~iiHrDlKp~NIll~~~~~~kl~DFGla~~  279 (392)
                      ..++|+|+++.||+++.++ ++|.||+.+..
T Consensus       232 ~~liHGDl~~~Nil~~~~~-~~lID~e~a~~  261 (420)
T 2pyw_A          232 QALIHGDLHTGSVMVTQDS-TQVIDPEFSFY  261 (420)
T ss_dssp             CEEECSCCSGGGEEECSSC-EEECCCTTCEE
T ss_pred             CeEEecCCCCCcEEEeCCC-CEEEeCccccc
Confidence            3799999999999998776 99999988765

>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6

Probab=82.06  E-value=0.43  Score=43.86  Aligned_cols=32  Identities=25%  Similarity=0.183  Sum_probs=26.5

Q ss_pred             CCceeecccccceeEEcCCCCCeEeeeeceEE
Q 045577          248 RLEIIHRDHKTSNVLLDAEINPNISDFGPARI  279 (392)
Q Consensus       248 ~~~iiHrDlKp~NIll~~~~~~kl~DFGla~~  279 (392)
                      ...++|+|+.+.||+++.+....|.||+.+..
T Consensus       186 ~~~liHgDl~~~Nil~~~~~~~~lIDf~~a~~  217 (322)
T 2ppq_A          186 PAGVIHADLFQDNVFFLGDELSGLIDFYFACN  217 (322)
T ss_dssp             CEEEECSCCCGGGEEEETTEEEEECCCTTCEE
T ss_pred             CcccCCCCCCccCEEEeCCceEEEecchhccC
Confidence            34799999999999998775557999987654

>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}

Probab=82.05  E-value=0.87  Score=42.11  Aligned_cols=31  Identities=29%  Similarity=0.515  Sum_probs=26.8

Q ss_pred             CceeecccccceeEEcCC----CCCeEeeeeceEE
Q 045577          249 LEIIHRDHKTSNVLLDAE----INPNISDFGPARI  279 (392)
Q Consensus       249 ~~iiHrDlKp~NIll~~~----~~~kl~DFGla~~  279 (392)
                      ..++|+|+.+.||+++.+    ..+.|.||+.+..
T Consensus       183 ~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~  217 (333)
T 3csv_A          183 MVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKL  217 (333)
T ss_dssp             CEEECSCCSGGGEEECTTSCGGGGEEECCCTTCEE
T ss_pred             CeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCc
Confidence            479999999999999874    5789999998865

>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*

Probab=80.72  E-value=0.54  Score=41.92  Aligned_cols=31  Identities=23%  Similarity=0.272  Sum_probs=26.2

Q ss_pred             CceeecccccceeEEcCCCCCeEeeeeceEE
Q 045577          249 LEIIHRDHKTSNVLLDAEINPNISDFGPARI  279 (392)
Q Consensus       249 ~~iiHrDlKp~NIll~~~~~~kl~DFGla~~  279 (392)
                      ..++|+|+.+.||+++.+..+-|.||+.+..
T Consensus       193 ~~l~HGDl~~~Nil~~~~~~~~viDwe~a~~  223 (272)
T 4gkh_A          193 SVVTHGDFSLDNLIFDEGKLIGCIDVGRVGI  223 (272)
T ss_dssp             EEEECSCCCTTSEEEETTEEEEECCCTTCEE
T ss_pred             cEEEcCCCCCCeEEEECCeEEEEEECccccc
Confidence            3689999999999999876677899987754

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	392
d1mqba_	283	d.144.1.7 (A:) epha2 receptor tyrosine kinase {Hum	3e-15
d1rjba_	325	d.144.1.7 (A:) Fl cytokine receptor {Human (Homo s	9e-14
d1u59a_	285	d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Hum	5e-13
d1uwha_	276	d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens)	6e-13
d1qpca_	272	d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Hom	7e-13
d1xkka_	317	d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-	8e-13
d1jpaa_	299	d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mou	9e-13
d1sm2a_	263	d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Hu	1e-12
d1lufa_	301	d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus n	3e-12
d1fmka3	285	d.144.1.7 (A:249-533) c-src tyrosine kinase {Human	3e-12
d1fvra_	309	d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [	7e-12
d1k2pa_	258	d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Hum	1e-11
d1opja_	287	d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mou	2e-11
d1t46a_	311	d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens	4e-11
d1ywna1	299	d.144.1.7 (A:818-1166) Vascular endothelial growth	4e-11
d1xbba_	277	d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human	8e-11
d1r0pa_	311	d.144.1.7 (A:) Hepatocyte growth factor receptor,	2e-10
d1byga_	262	d.144.1.7 (A:) Carboxyl-terminal src kinase (csk)	8e-10
d1mp8a_	273	d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Huma	1e-09
d2jfla1	288	d.144.1.7 (A:21-308) STE20-like serine/threonine-p	1e-09
d1u46a_	273	d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Hum	2e-09
d2java1	269	d.144.1.7 (A:3-271) Serine/threonine-protein kinas	2e-09
d1vjya_	303	d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human	4e-09
d1p4oa_	308	d.144.1.7 (A:) Insulin-like growth factor 1 recept	6e-09
d1s9ja_	322	d.144.1.7 (A:) Dual specificity mitogen-activated	1e-08
d2j4za1	263	d.144.1.7 (A:126-388) Aurora-related kinase 1 (aur	1e-08
d1kj1a_	109	b.78.1.1 (A:) Lectin (agglutinin) {Garlic (Allium	2e-08
d1nvra_	271	d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {	2e-08
d1u5ra_	309	d.144.1.7 (A:) Serine/threonine protein kinase TAO	2e-08
d1t4ha_	270	d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sa	3e-08
d1uu3a_	288	d.144.1.7 (A:) 3-phosphoinositide dependent protei	3e-08
d1fgka_	299	d.144.1.7 (A:) Fibroblast growth factor receptor 1	1e-07
d1fota_	316	d.144.1.7 (A:) cAMP-dependent PK, catalytic subuni	2e-07
d1gz8a_	298	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (H	2e-07
d1ob3a_	286	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmod	5e-07
d3blha1	318	d.144.1.7 (A:8-325) Cell division protein kinase 9	6e-07
d1unla_	292	d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (H	1e-06
d1xd5a_	112	b.78.1.1 (A:) Gastrodianin (antifungal protein) {G	1e-06
d1omwa3	364	d.144.1.7 (A:186-549) G-protein coupled receptor k	3e-06
d1csna_	293	d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast	8e-06
d1rdqe_	350	d.144.1.7 (E:) cAMP-dependent PK, catalytic subuni	1e-05
d1phka_	277	d.144.1.7 (A:) gamma-subunit of glycogen phosphory	1e-05
d1yhwa1	293	d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [	3e-05
d1ua2a_	299	d.144.1.7 (A:) Cell division protein kinase 7, CDK	3e-05
d1xwsa_	273	d.144.1.7 (A:) Proto-oncogene serine/threonine-pro	3e-05
d1xjda_	320	d.144.1.7 (A:) Protein kinase C, theta type {Human	3e-05
d1koaa2	350	d.144.1.7 (A:5915-6264) Twitchin, kinase domain {C	4e-05
d1blxa_	305	d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (H	6e-05
d1koba_	352	d.144.1.7 (A:) Twitchin, kinase domain {California	2e-04
d1jpca_	108	b.78.1.1 (A:) Lectin (agglutinin) {Snowdrop (Galan	2e-04
d1vzoa_	322	d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5	2e-04
d1o6la_	337	d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sap	3e-04
d1ckia_	299	d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus n	3e-04
d1pmea_	345	d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapien	3e-04
d2ozaa1	335	d.144.1.7 (A:51-385) MAP kinase activated protein	6e-04
d1q5ka_	350	d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gs	0.001
d1dlpa2	120	b.78.1.1 (A:116-235) Fetuin-binding protein Scafet	0.003
d1o6ya_	277	d.144.1.7 (A:) Mycobacterial protein kinase PknB,	0.004

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 283

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 73.3 bits (179), Expect = 3e-15
 Identities = 38/208 (18%), Positives = 82/208 (39%), Gaps = 33/208 (15%)

Query: 190 RNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRL 249
           R          + ++ E ++     +F  E +       +  +L GIA  + Y    + +
Sbjct: 73  RLEGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKY---LANM 129

Query: 250 EIIHRDHKTSNVLLDAEINPNISDFGPARIFGDQTEEVTGRVIGTQTLK-TVPELLQ--- 305
             +HRD    N+L+++ +   +SDFG +R+  D  E       G   ++ T PE +    
Sbjct: 130 NYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYRK 189

Query: 306 -------------AWKLWSEGDP----------MEIIDEQTKMKGPFSADELVKCIEVGL 342
                         W++ + G+           M+ I++  ++  P   D      ++ +
Sbjct: 190 FTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAINDGFRL--PTPMDCPSAIYQLMM 247

Query: 343 LCVQQRIEDWPTMSSVLTMLSNESIKVP 370
            C QQ     P  + ++++L ++ I+ P
Sbjct: 248 QCWQQERARRPKFADIVSIL-DKLIRAP 274

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 325

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 69.4 bits (169), Expect = 9e-14
 Identities = 33/162 (20%), Positives = 52/162 (32%), Gaps = 32/162 (19%)

Query: 231 NILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEINPNISDFGPARIFGDQTEEVTGR 290
              Y +A+ + +L   S    +HRD    NVL+       I DFG AR     +  V   
Sbjct: 168 CFAYQVAKGMEFLEFKS---CVHRDLAARNVLVTHGKVVKICDFGLARDIMSDSNYVVRG 224

Query: 291 VIGTQTLKTVPELLQ----------------AWKLWSEGDP-----------MEIIDEQT 323
                     PE L                  W+++S G              ++I    
Sbjct: 225 NARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPVDANFYKLIQNGF 284

Query: 324 KMKGPFSADELVKCIEVGLLCVQQRIEDWPTMSSVLTMLSNE 365
           KM  PF A E  +   +   C        P+  ++ + L  +
Sbjct: 285 KMDQPFYATE--EIYIIMQSCWAFDSRKRPSFPNLTSFLGCQ 324

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 66.7 bits (162), Expect = 5e-13
 Identities = 44/207 (21%), Positives = 66/207 (31%), Gaps = 34/207 (16%)

Query: 196 CGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRD 255
           C    + L+ E        +F          S V  +L+ ++  + YL        +HRD
Sbjct: 78  CQAEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYL---EEKNFVHRD 134

Query: 256 HKTSNVLLDAEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTV-PELLQAWKLWSEGD 314
               NVLL       ISDFG ++  G      T R  G   LK   PE +   K  S  D
Sbjct: 135 LAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSD 194

Query: 315 -------PMEIIDEQTKMKGPFSAD---ELVKCIEVG-----------------LLCVQQ 347
                    E +   +  + P+      E++  IE G                   C   
Sbjct: 195 VWSYGVTMWEAL---SYGQKPYKKMKGPEVMAFIEQGKRMECPPECPPELYALMSDCWIY 251

Query: 348 RIEDWPTMSSVLTMLSNESIKVPQPEE 374
           + ED P   +V   +      +    E
Sbjct: 252 KWEDRPDFLTVEQRMRACYYSLASKVE 278

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 276

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 66.1 bits (161), Expect = 6e-13
 Identities = 29/207 (14%), Positives = 67/207 (32%), Gaps = 34/207 (16%)

Query: 196 CGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRD 255
               ++ ++ +  +           E       + +I    A+ + YL   S   IIHRD
Sbjct: 73  STAPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKS---IIHRD 129

Query: 256 HKTSNVLLDAEINPNISDFGPARIFG-DQTEEVTGRVIGT---------QTLKTVP---- 301
            K++N+ L  ++   I DFG A +           ++ G+         +     P    
Sbjct: 130 LKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQ 189

Query: 302 -----------ELLQAWKLWSEGDPMEIIDEQTKMK------GPFSADELVKCIEVGLLC 344
                      EL+     +S  +  + I                 ++       +   C
Sbjct: 190 SDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAEC 249

Query: 345 VQQRIEDWPTMSSVLTMLSNESIKVPQ 371
           ++++ ++ P    +L  +   +  +P+
Sbjct: 250 LKKKRDERPLFPQILASIELLARSLPK 276

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} Length = 272

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 65.8 bits (160), Expect = 7e-13
 Identities = 34/195 (17%), Positives = 78/195 (40%), Gaps = 31/195 (15%)

Query: 196 CGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSY-VTNILYGIARVILYLPEDSRLEIIHR 254
                ++++ E ++     +F       K +   + ++   IA  + ++ E +    IHR
Sbjct: 77  VTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN---YIHR 133

Query: 255 DHKTSNVLLDAEINPNISDFGPARIFGDQTEEVTGRVIGT-------------QTLK--- 298
           D + +N+L+   ++  I+DFG AR+  D                          T+K   
Sbjct: 134 DLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDV 193

Query: 299 -----TVPELLQAWKLWSEGDP----MEIIDEQTKMKGPFSADELVKCIEVGLLCVQQRI 349
                 + E++   ++   G      ++ ++   +M  P +  E  +  ++  LC ++R 
Sbjct: 194 WSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPE--ELYQLMRLCWKERP 251

Query: 350 EDWPTMSSVLTMLSN 364
           ED PT   + ++L +
Sbjct: 252 EDRPTFDYLRSVLED 266

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 317

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 66.4 bits (161), Expect = 8e-13
 Identities = 33/194 (17%), Positives = 66/194 (34%), Gaps = 31/194 (15%)

Query: 196 CGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRD 255
           C    V L+ + +      ++  E + +  S Y+ N    IA+ + YL       ++HRD
Sbjct: 80  CLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRD 136

Query: 256 HKTSNVLLDAEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELLQ---------- 305
               NVL+    +  I+DFG A++ G + +E               E +           
Sbjct: 137 LAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDV 196

Query: 306 ------AWKLWSEGDP----------MEIIDEQTKMKGPFSADELVKCIEVGLLCVQQRI 349
                  W+L + G              I+++  ++  P      +    + + C     
Sbjct: 197 WSYGVTVWELMTFGSKPYDGIPASEISSILEKGERL--PQPPICTIDVYMIMVKCWMIDA 254

Query: 350 EDWPTMSSVLTMLS 363
           +  P    ++   S
Sbjct: 255 DSRPKFRELIIEFS 268

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 65.9 bits (160), Expect = 9e-13
 Identities = 36/200 (18%), Positives = 68/200 (34%), Gaps = 30/200 (15%)

Query: 190 RNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRL 249
                      V ++ E ++      F  + +       +  +L GIA  + YL   + +
Sbjct: 91  HLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYL---ADM 147

Query: 250 EIIHRDHKTSNVLLDAEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTV---PELLQA 306
             +HRD    N+L+++ +   +SDFG +R   D T + T        +      PE +Q 
Sbjct: 148 NYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQY 207

Query: 307 WKLWSEGD-----------------------PMEIIDE-QTKMKGPFSADELVKCIEVGL 342
            K  S  D                         ++I+  +   + P   D      ++ L
Sbjct: 208 RKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDVINAIEQDYRLPPPMDCPSALHQLML 267

Query: 343 LCVQQRIEDWPTMSSVLTML 362
            C Q+     P    ++  L
Sbjct: 268 DCWQKDRNHRPKFGQIVNTL 287

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 65.1 bits (158), Expect = 1e-12
 Identities = 35/190 (18%), Positives = 65/190 (34%), Gaps = 28/190 (14%)

Query: 198 DGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHK 257
              + L+FE ++    S++         +  +  +   +   + YL E     +IHRD  
Sbjct: 72  QAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEAC---VIHRDLA 128

Query: 258 TSNVLLDAEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELLQ------------ 305
             N L+       +SDFG  R   D     +            PE+              
Sbjct: 129 ARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFP-VKWASPEVFSFSRYSSKSDVWS 187

Query: 306 ----AWKLWSEGDP-------MEIIDE-QTKMKGPFSADELVKCIEVGLLCVQQRIEDWP 353
                W+++SEG          E++++  T  +            ++   C ++R ED P
Sbjct: 188 FGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPRLASTHVYQIMNHCWKERPEDRP 247

Query: 354 TMSSVLTMLS 363
             S +L  L+
Sbjct: 248 AFSRLLRQLA 257

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 301

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 64.5 bits (156), Expect = 3e-12
 Identities = 28/156 (17%), Positives = 48/156 (30%), Gaps = 27/156 (17%)

Query: 231 NILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEINPNISDFGPARIFGDQTEEVTGR 290
            I   +A  + YL E      +HRD  T N L+   +   I+DFG +R            
Sbjct: 144 CIARQVAAGMAYLSERK---FVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYKADG 200

Query: 291 VIGTQTLKTVPELLQAWK------LWSEG-----------------DPMEIIDEQTKMKG 327
                     PE +   +      +W+ G                    E+I        
Sbjct: 201 NDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMAHEEVIYYVRDGNI 260

Query: 328 P-FSADELVKCIEVGLLCVQQRIEDWPTMSSVLTML 362
                +  ++   +  LC  +   D P+  S+  +L
Sbjct: 261 LACPENCPLELYNLMRLCWSKLPADRPSFCSIHRIL 296

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 64.3 bits (156), Expect = 3e-12
 Identities = 30/202 (14%), Positives = 70/202 (34%), Gaps = 28/202 (13%)

Query: 196 CGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRD 255
             +  ++++ E   +   S        +     +  ++   A++   +    R+  +HRD
Sbjct: 81  VSEEPIYIVTE--YMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRD 138

Query: 256 HKTSNVLLDAEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELLQAWK------L 309
            + +N+L+   +   ++DFG AR+  D                T PE     +      +
Sbjct: 139 LRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFP-IKWTAPEAALYGRFTIKSDV 197

Query: 310 WSEG-----------------DPMEIIDEQTK-MKGPFSADELVKCIEVGLLCVQQRIED 351
           WS G                    E++D+  +  + P   +      ++   C ++  E+
Sbjct: 198 WSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQCWRKEPEE 257

Query: 352 WPTMSSVLTMLSNESIKVPQPE 373
            PT   +   L  +     +P+
Sbjct: 258 RPTFEYLQAFL-EDYFTSTEPQ 278

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 63.3 bits (153), Expect = 7e-12
 Identities = 34/194 (17%), Positives = 73/194 (37%), Gaps = 29/194 (14%)

Query: 194 ADCGDGEVFLMFEGIKLPDKSEFTCEFECSKYS-SYVTNILYGIARVILYLPEDSRLEII 252
           A  G+   FL    +   D +        S  S   + +    +AR + YL +    + I
Sbjct: 93  APHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQ---KQFI 149

Query: 253 HRDHKTSNVLLDAEINPNISDFGPARIFGDQTEEVTGRV----IGTQTLKTVP------- 301
           HRD    N+L+       I+DFG +R      ++  GR+    +  ++L           
Sbjct: 150 HRDLAARNILVGENYVAKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDV 209

Query: 302 --------ELLQAWKLWSEGDP----MEIIDEQTKMKGPFSADELVKCIEVGLLCVQQRI 349
                   E++        G       E + +  +++ P + D+  +  ++   C +++ 
Sbjct: 210 WSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYRLEKPLNCDD--EVYDLMRQCWREKP 267

Query: 350 EDWPTMSSVLTMLS 363
            + P+ + +L  L+
Sbjct: 268 YERPSFAQILVSLN 281

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} Length = 258

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 62.4 bits (151), Expect = 1e-11
 Identities = 32/193 (16%), Positives = 66/193 (34%), Gaps = 32/193 (16%)

Query: 198 DGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHK 257
              +F++ E +       +  E      +  +  +   +   + YL        +HRD  
Sbjct: 71  QRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQ---FLHRDLA 127

Query: 258 TSNVLLDAEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELLQ------------ 305
             N L++ +    +SDFG +R   D     +          + PE+L             
Sbjct: 128 ARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFP-VRWSPPEVLMYSKFSSKSDIWA 186

Query: 306 ----AWKLWSEGDP----------MEIIDEQTKMKGPFSADELVKCIEVGLLCVQQRIED 351
                W+++S G             E I +  ++  P  A E  K   +   C  ++ ++
Sbjct: 187 FGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRPHLASE--KVYTIMYSCWHEKADE 244

Query: 352 WPTMSSVLTMLSN 364
            PT   +L+ + +
Sbjct: 245 RPTFKILLSNILD 257

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} Length = 287

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 61.7 bits (149), Expect = 2e-11
 Identities = 27/159 (16%), Positives = 50/159 (31%), Gaps = 30/159 (18%)

Query: 231 NILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEINPNISDFGPARIFGDQTEEVTGR 290
            +   I+  + YL    +   IHRD    N L+       ++DFG +R+    T      
Sbjct: 119 YMATQISSAMEYL---EKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAG 175

Query: 291 VIGTQ-------------TLK--------TVPELLQAWKLWSEGDP----MEIIDEQTKM 325
                             ++K         + E+         G       E++++  +M
Sbjct: 176 AKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRM 235

Query: 326 KGPFSADELVKCIEVGLLCVQQRIEDWPTMSSVLTMLSN 364
           + P    E  K  E+   C Q    D P+ + +      
Sbjct: 236 ERPEGCPE--KVYELMRACWQWNPSDRPSFAEIHQAFET 272

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 61.4 bits (148), Expect = 4e-11
 Identities = 33/162 (20%), Positives = 53/162 (32%), Gaps = 32/162 (19%)

Query: 231 NILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEINPNISDFGPAR-IFGDQTEEVTG 289
           +  Y +A+ + +L   +    IHRD    N+LL       I DFG AR I  D    V G
Sbjct: 149 SFSYQVAKGMAFLASKN---CIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKG 205

Query: 290 RVIGT-------------QTLK--------TVPELLQAWKLWSEGDP-----MEIIDEQT 323
                              T +         + EL         G P      ++I E  
Sbjct: 206 NARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGF 265

Query: 324 KMKGPFSADELVKCIEVGLLCVQQRIEDWPTMSSVLTMLSNE 365
           +M  P  A    +  ++   C        PT   ++ ++  +
Sbjct: 266 RMLSPEHAPA--EMYDIMKTCWDADPLKRPTFKQIVQLIEKQ 305

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 61.1 bits (147), Expect = 4e-11
 Identities = 31/161 (19%), Positives = 50/161 (31%), Gaps = 32/161 (19%)

Query: 231 NILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEINPNISDFGPAR-IFGDQTEEVTG 289
              + +A+ + +L   +  + IHRD    N+LL  +    I DFG AR I+ D      G
Sbjct: 138 CYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKG 194

Query: 290 RVIGT---------------------QTLKTVPELLQAWKLWSEGDP-----MEIIDEQT 323
                                          + E+         G          + E T
Sbjct: 195 DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGT 254

Query: 324 KMKGPFSADELVKCIEVGLLCVQQRIEDWPTMSSVLTMLSN 364
           +M+ P       +  +  L C        PT S ++  L N
Sbjct: 255 RMRAPDYTTP--EMYQTMLDCWHGEPSQRPTFSELVEHLGN 293

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 60.1 bits (145), Expect = 8e-11
 Identities = 36/196 (18%), Positives = 72/196 (36%), Gaps = 33/196 (16%)

Query: 196 CGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRD 255
           C      L+ E  +L   +++  +    K  + +  +++ ++  + YL E +    +HRD
Sbjct: 77  CEAESWMLVMEMAELGPLNKYLQQNRHVKDKN-IIELVHQVSMGMKYLEESN---FVHRD 132

Query: 256 HKTSNVLLDAEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTV-PELLQ--------- 305
               NVLL  +    ISDFG ++           +  G   +K   PE +          
Sbjct: 133 LAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSD 192

Query: 306 -------AWKLWSEGDP----------MEIIDEQTKMKGPFSADELVKCIEVGLLCVQQR 348
                   W+ +S G              ++++  +M  P       +  ++  LC    
Sbjct: 193 VWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPAGCPR--EMYDLMNLCWTYD 250

Query: 349 IEDWPTMSSVLTMLSN 364
           +E+ P  ++V   L N
Sbjct: 251 VENRPGFAAVELRLRN 266

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 59.0 bits (142), Expect = 2e-10
 Identities = 33/193 (17%), Positives = 66/193 (34%), Gaps = 29/193 (15%)

Query: 197 GDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDH 256
            +G   ++   +K  D   F        ++  V +++    +V   +   +  + +HRD 
Sbjct: 100 SEGSPLVVLPYMKHGDLRNFIR---NETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRDL 156

Query: 257 KTSNVLLDAEINPNISDFGPARIFGDQTEEVTGRVIGTQ--TLKTVPELLQAWKLWSEGD 314
              N +LD +    ++DFG AR   D+  +      G +        E LQ  K  ++ D
Sbjct: 157 AARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSD 216

Query: 315 -----------------------PMEIIDEQTKMKGPFSADELVK-CIEVGLLCVQQRIE 350
                                    +I     + +     +       EV L C   + E
Sbjct: 217 VWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAE 276

Query: 351 DWPTMSSVLTMLS 363
             P+ S +++ +S
Sbjct: 277 MRPSFSELVSRIS 289

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 262

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 56.6 bits (136), Expect = 8e-10
 Identities = 28/192 (14%), Positives = 61/192 (31%), Gaps = 25/192 (13%)

Query: 197 GDGEVFLMFEGIKLPDKSEFTCEFECSKYS-SYVTNILYGIARVILYLPEDSRLEIIHRD 255
             G ++++ E +      ++      S      +      +   + YL  ++    +HRD
Sbjct: 72  EKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNN---FVHRD 128

Query: 256 HKTSNVLLDAEINPNISDFGPARIFGDQT------------EEVTGRVIGTQTL-----K 298
               NVL+  +    +SDFG  +                  E +  +   T++       
Sbjct: 129 LAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGI 188

Query: 299 TVPELLQAWKLWSEGDPMEIIDEQTKMKGPFSADELV--KCIEVGLLCVQQRIEDWPTMS 356
            + E+    ++     P++ +  + +      A +       EV   C        P+  
Sbjct: 189 LLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMDAPDGCPPAVYEVMKNCWHLDAAMRPSFL 248

Query: 357 SVLTMLSNESIK 368
            +   L  E IK
Sbjct: 249 QLREQL--EHIK 258

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 56.7 bits (136), Expect = 1e-09
 Identities = 27/192 (14%), Positives = 55/192 (28%), Gaps = 26/192 (13%)

Query: 196 CGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRD 255
             +  V+++ E   L +   F    + S   + +    Y ++  + YL        +HRD
Sbjct: 77  ITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYL---ESKRFVHRD 133

Query: 256 HKTSNVLLDAEINPNISDFGPARIFGDQTEEVTGRVIGT------QTLKTVP-------- 301
               NVL+ +     + DFG +R   D T     +          +++            
Sbjct: 134 IAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVW 193

Query: 302 --------ELLQAWKLWSEGDPMEIIDEQTKMKGPFSADELVK-CIEVGLLCVQQRIEDW 352
                    L+   K +      ++I      +              +   C        
Sbjct: 194 MFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNCPPTLYSLMTKCWAYDPSRR 253

Query: 353 PTMSSVLTMLSN 364
           P  + +   LS 
Sbjct: 254 PRFTELKAQLST 265

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 56.1 bits (135), Expect = 1e-09
 Identities = 37/219 (16%), Positives = 76/219 (34%), Gaps = 42/219 (19%)

Query: 192 WEADCGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEI 251
            +A   +  ++++ E            E E     S +  +       + YL +    +I
Sbjct: 75  LDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHD---NKI 131

Query: 252 IHRDHKTSNVLLDAEINPNISDFGPARIFGDQTEEVTGRV----------IGTQTLKTVP 301
           IHRD K  N+L   + +  ++DFG +       +     +          +  +T K  P
Sbjct: 132 IHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDSFIGTPYWMAPEVVMCETSKDRP 191

Query: 302 ---------------ELLQAWKLWSEGDPMEIIDEQTKMKGPFSA------DELVKCIEV 340
                          E+ +      E +PM ++ +  K + P  A            ++ 
Sbjct: 192 YDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPTLAQPSRWSSNFKDFLK- 250

Query: 341 GLLCVQQRIEDWPTMSSVL-----TMLSNESIKVPQPEE 374
              C+++ ++   T S +L     T+ SN+ I+    E 
Sbjct: 251 --KCLEKNVDARWTTSQLLQHPFVTVDSNKPIRELIAEA 287

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 55.9 bits (134), Expect = 2e-09
 Identities = 31/193 (16%), Positives = 54/193 (27%), Gaps = 29/193 (15%)

Query: 196 CGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRD 255
                + ++ E   L    +   + +       ++     +A  + YL        IHRD
Sbjct: 80  VLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKR---FIHRD 136

Query: 256 HKTSNVLLDAEINPNISDFGPARIF--GDQTEEVTGRVIGT------------------- 294
               N+LL       I DFG  R     D    +                          
Sbjct: 137 LAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASD 196

Query: 295 --QTLKTVPELLQAWKL-WSEGDPMEIIDEQTKMKGPFSADELV--KCIEVGLLCVQQRI 349
                 T+ E+    +  W   +  +I+ +  K        E        V + C   + 
Sbjct: 197 TWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPEDCPQDIYNVMVQCWAHKP 256

Query: 350 EDWPTMSSVLTML 362
           ED PT  ++   L
Sbjct: 257 EDRPTFVALRDFL 269

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} Length = 269

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 55.4 bits (133), Expect = 2e-09
 Identities = 35/246 (14%), Positives = 74/246 (30%), Gaps = 30/246 (12%)

Query: 142 KRGMNLRTGWNQNIKAWNLEKSDTPQLVLWRRTEKVFRSWNGISGGCKRNWEADCGDGEV 201
           ++      G     K  +       +  +      + R     +     +   D  +  +
Sbjct: 21  QKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTL 80

Query: 202 FLMFEGIKLPDKSEFTCEFECSKYS---SYVTNILYGIARVILYLPE--DSRLEIIHRDH 256
           +++ E  +  D +    +    +      +V  ++  +   +       D    ++HRD 
Sbjct: 81  YIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDL 140

Query: 257 KTSNVLLDAEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELLQAWK------LW 310
           K +NV LD + N  + DFG ARI    T      V     +   PE +          +W
Sbjct: 141 KPANVFLDGKQNVKLGDFGLARILNHDTSFAKAFVGTPYYMS--PEQMNRMSYNEKSDIW 198

Query: 311 SEG----------------DPMEIIDEQTKMKGPFSADELVK-CIEVGLLCVQQRIEDWP 353
           S G                   E+  +  + K             E+    +  +    P
Sbjct: 199 SLGCLLYELCALMPPFTAFSQKELAGKIREGKFRRIPYRYSDELNEIITRMLNLKDYHRP 258

Query: 354 TMSSVL 359
           ++  +L
Sbjct: 259 SVEEIL 264

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} Length = 303

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 55.2 bits (132), Expect = 4e-09
 Identities = 30/203 (14%), Positives = 56/203 (27%), Gaps = 63/203 (31%)

Query: 229 VTNILYGIARVILYLPED-----SRLEIIHRDHKTSNVLLDAEINPNISDFGPARIF--- 280
           +  +    A  + +L  +      +  I HRD K+ N+L+       I+D G A      
Sbjct: 102 MIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSA 161

Query: 281 GDQTEEVTGRVIGTQTLKTVPELLQ------------AWKLWSEG--------------- 313
            D  +      +GT+     PE+L                +++ G               
Sbjct: 162 TDTIDIAPNHRVGTKR-YMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGI 220

Query: 314 ---------------DPMEIIDEQTKMKG--------PFSADELVKCIEVGLLCVQQRIE 350
                            +E + +    +           S + L    ++   C      
Sbjct: 221 HEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGA 280

Query: 351 DWPTMSSVLTMLSN----ESIKV 369
              T   +   LS     E IK+
Sbjct: 281 ARLTALRIKKTLSQLSQQEGIKM 303

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 308

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 54.5 bits (130), Expect = 6e-09
 Identities = 29/171 (16%), Positives = 53/171 (30%), Gaps = 29/171 (16%)

Query: 231 NILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEINPNISDFGPARIFGDQTEEVTGR 290
            +   IA  + YL  +   + +HRD    N ++  +    I DFG  R   +      G 
Sbjct: 137 QMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGG 193

Query: 291 VIGTQTLKTVPELLQ------AWKLWSEG-----------------DPMEIIDEQTKMKG 327
                     PE L+         +WS G                    +++    +   
Sbjct: 194 KGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGL 253

Query: 328 PFSADELVK-CIEVGLLCVQQRIEDWPTMSSVLTMLSNESIKVPQPEEVCF 377
               D       E+  +C Q   +  P+   +++ +  +    P   EV F
Sbjct: 254 LDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSI--KEEMEPGFREVSF 302

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 53.9 bits (129), Expect = 1e-08
 Identities = 26/118 (22%), Positives = 50/118 (42%), Gaps = 9/118 (7%)

Query: 198 DGEVFLMFEGIKLPDKSEFTCEFECSKYS-SYVTNILYGIARVILYLPEDSRLEIIHRDH 256
           DGE+ +  E   +   S      +  +     +  +   + + + YL    + +I+HRD 
Sbjct: 76  DGEISICME--HMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYL--REKHKIMHRDV 131

Query: 257 KTSNVLLDAEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELLQAWKLWSEGD 314
           K SN+L+++     + DFG +    D    +    +GT++    PE LQ      + D
Sbjct: 132 KPSNILVNSRGEIKLCDFGVSGQLID---SMANSFVGTRSY-MSPERLQGTHYSVQSD 185

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 53.1 bits (127), Expect = 1e-08
 Identities = 33/185 (17%), Positives = 60/185 (32%), Gaps = 32/185 (17%)

Query: 198 DGEVFLMFEGIKLPDKSEFTCEFECSKYS-SYVTNILYGIARVILYLPEDSRLEIIHRDH 256
              V+L+ E    P  + +    + SK+        +  +A  + Y        +IHRD 
Sbjct: 78  ATRVYLILE--YAPLGTVYRELQKLSKFDEQRTATYITELANALSYC---HSKRVIHRDI 132

Query: 257 KTSNVLLDAEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELLQAWK------LW 310
           K  N+LL +     I+DFG +             + GT      PE+++         LW
Sbjct: 133 KPENLLLGSAGELKIADFGWSVHAPSSR---RTTLCGTLD-YLPPEMIEGRMHDEKVDLW 188

Query: 311 SEG----------------DPMEIIDEQTKMKGPFSADELVKCIEVGLLCVQQRIEDWPT 354
           S G                   E     ++++  F         ++    ++      P 
Sbjct: 189 SLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRPM 248

Query: 355 MSSVL 359
           +  VL
Sbjct: 249 LREVL 253

>d1kj1a_ b.78.1.1 (A:) Lectin (agglutinin) {Garlic (Allium sativum) [TaxId: 4682]} Length = 109

class: All beta proteins
fold: beta-Prism II
superfamily: alpha-D-mannose-specific plant lectins
family: alpha-D-mannose-specific plant lectins
domain: Lectin (agglutinin)
species: Garlic (Allium sativum) [TaxId: 4682]

 Score = 50.0 bits (119), Expect = 2e-08
 Identities = 20/116 (17%), Positives = 34/116 (29%), Gaps = 26/116 (22%)

Query: 31  RDILLAPSTLWGGNSLIPGNSSQSF-----LVISYKNLPPLVIWVANRNGSINSNLS--- 82
           R++L     L+ G SL              LV+   +     +W +N             
Sbjct: 1   RNLLTNGEGLYAGQSLDVEPYHFIMQEDCNLVLYDHSTS---VWASNTGILGKKGCKAVL 57

Query: 83  --------QDNDLGIIWNVILPRATGSPALQLLVAGNLVLREFSLSHSEGYLWESF 130
                    D +   +W     R  G+  L L   GN+V+           +W + 
Sbjct: 58  QSDGNFVVYDAEGRSLWASHSVRGNGNYVLVLQEDGNVVIYGSD-------IWSTG 106

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 271

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 52.7 bits (126), Expect = 2e-08
 Identities = 36/183 (19%), Positives = 62/183 (33%), Gaps = 20/183 (10%)

Query: 190 RNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSKYS-SYVTNILYGIARVILYLPEDSR 248
           + +         +L  E         F                  + +   ++YL     
Sbjct: 67  KFYGHRREGNIQYLFLE--YCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYL---HG 121

Query: 249 LEIIHRDHKTSNVLLDAEINPNISDFGPARIFG-DQTEEVTGRVIGTQTLKTVPELLQAW 307
           + I HRD K  N+LLD   N  ISDFG A +F  +  E +  ++ GT      PELL+  
Sbjct: 122 IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPY-VAPELLKRR 180

Query: 308 KL-------WSEGDPM-EIIDEQTKMKGPFSADELVKCIEVGLLCVQQRIEDWPTMSSVL 359
           +        WS G  +  ++  +     P  + +     +      +  +  W  + S  
Sbjct: 181 EFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEK----KTYLNPWKKIDSAP 236

Query: 360 TML 362
             L
Sbjct: 237 LAL 239

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 53.1 bits (127), Expect = 2e-08
 Identities = 33/184 (17%), Positives = 55/184 (29%), Gaps = 27/184 (14%)

Query: 198 DGEVFLMFEGIKLPDKSEFTCEFECSKYS-SYVTNILYGIARVILYLPEDSRLEIIHRDH 256
           +   +L+ E       +    E          +  + +G  + + YL       +IHRD 
Sbjct: 87  EHTAWLVME--YCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYL---HSHNMIHRDV 141

Query: 257 KTSNVLLDAEINPNISDFGPARIFGDQT-----------EEVTGRVIGTQTLK------- 298
           K  N+LL       + DFG A I                E +     G    K       
Sbjct: 142 KAGNILLSEPGLVKLGDFGSASIMAPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLG 201

Query: 299 -TVPELLQAWKLWSEGDPMEIIDEQTKMKGPFSADELV--KCIEVGLLCVQQRIEDWPTM 355
            T  EL +        + M  +    + + P                 C+Q+  +D PT 
Sbjct: 202 ITCIELAERKPPLFNMNAMSALYHIAQNESPALQSGHWSEYFRNFVDSCLQKIPQDRPTS 261

Query: 356 SSVL 359
             +L
Sbjct: 262 EVLL 265

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 270

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 51.9 bits (124), Expect = 3e-08
 Identities = 34/188 (18%), Positives = 68/188 (36%), Gaps = 31/188 (16%)

Query: 197 GDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDH 256
           G   + L+ E +       +   F+  K    + +    I + + +L   +   IIHRD 
Sbjct: 83  GKKCIVLVTELMTSGTLKTYLKRFKVMK-IKVLRSWCRQILKGLQFLHTRTP-PIIHRDL 140

Query: 257 KTSNVLLDAE-INPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELLQ-----AWKLW 310
           K  N+ +     +  I D G A +           VIGT      PE+ +     +  ++
Sbjct: 141 KCDNIFITGPTGSVKIGDLGLATLKRA---SFAKAVIGTPEF-MAPEMYEEKYDESVDVY 196

Query: 311 SEG-----------------DPMEIIDEQTKMKGPFSADELV--KCIEVGLLCVQQRIED 351
           + G                 +  +I    T    P S D++   +  E+   C++Q  ++
Sbjct: 197 AFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVKPASFDKVAIPEVKEIIEGCIRQNKDE 256

Query: 352 WPTMSSVL 359
             ++  +L
Sbjct: 257 RYSIKDLL 264

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 51.9 bits (124), Expect = 3e-08
 Identities = 28/184 (15%), Positives = 59/184 (32%), Gaps = 26/184 (14%)

Query: 198 DGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHK 257
           D +++         +        +   +        +  A ++  L       IIHRD K
Sbjct: 80  DEKLYFGLS--YAKNGELLKYIRKIGSFDETC--TRFYTAEIVSALEYLHGKGIIHRDLK 135

Query: 258 TSNVLLDAEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELLQ------AWKLWS 311
             N+LL+ +++  I+DFG A++   ++++              PELL       +  LW+
Sbjct: 136 PENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSACKSSDLWA 195

Query: 312 EG----------------DPMEIIDEQTKMKGPFSADELVKCIEVGLLCVQQRIEDWPTM 355
            G                +   I  +  K++  F      K  ++    +          
Sbjct: 196 LGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLVLDATKRLGC 255

Query: 356 SSVL 359
             + 
Sbjct: 256 EEME 259

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 50.2 bits (119), Expect = 1e-07
 Identities = 30/158 (18%), Positives = 52/158 (32%), Gaps = 27/158 (17%)

Query: 231 NILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEINPNISDFGPARIFGDQT------ 284
           +  Y +AR + YL      + IHRD    NVL+  +    I+DFG AR            
Sbjct: 139 SCAYQVARGMEYLAS---KKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTT 195

Query: 285 -----------EEVTGRVIGTQT-----LKTVPELLQAWKLWSEGDPMEIIDEQTK--MK 326
                      E +  R+   Q+        + E+         G P+E + +  K   +
Sbjct: 196 NGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHR 255

Query: 327 GPFSADELVKCIEVGLLCVQQRIEDWPTMSSVLTMLSN 364
               ++   +   +   C        PT   ++  L  
Sbjct: 256 MDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDR 293

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 316

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 50.1 bits (119), Expect = 2e-07
 Identities = 21/56 (37%), Positives = 28/56 (50%)

Query: 236 IARVILYLPEDSRLEIIHRDHKTSNVLLDAEINPNISDFGPARIFGDQTEEVTGRV 291
            A V L L      +II+RD K  N+LLD   +  I+DFG A+   D T  + G  
Sbjct: 110 AAEVCLALEYLHSKDIIYRDLKPENILLDKNGHIKITDFGFAKYVPDVTYTLCGTP 165

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} Length = 298

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 49.5 bits (117), Expect = 2e-07
 Identities = 33/170 (19%), Positives = 62/170 (36%), Gaps = 7/170 (4%)

Query: 143 RGMNLRTGWNQNIKAWNLEKSDTPQLVLWRRTEKVFRSWNGISGGCKRNWEADCGDGEVF 202
           +  N  TG    +K   L+           R   + +  N       +  +    + +++
Sbjct: 20  KARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN--HPNIVKLLDVIHTENKLY 77

Query: 203 LMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVL 262
           L+FE +    K               + + L+ + + + +        ++HRD K  N+L
Sbjct: 78  LVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH---RVLHRDLKPQNLL 134

Query: 263 LDAEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELLQAWKLWSE 312
           ++ E    ++DFG AR FG      T  V         PE+L   K +S 
Sbjct: 135 INTEGAIKLADFGLARAFGVPVRTYTHEV--VTLWYRAPEILLGCKYYST 182

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} Length = 286

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

 Score = 48.7 bits (115), Expect = 5e-07
 Identities = 41/236 (17%), Positives = 79/236 (33%), Gaps = 19/236 (8%)

Query: 155 IKAWNLEKSDTPQLVLWRRTEKVFRSWNGISGGCKRNWEADCGDGEVFLMFEGIKLPDKS 214
           +K   LEK D        R   + +          + ++       + L+FE +    K 
Sbjct: 31  LKKIRLEKEDEGIPSTTIREISILKELK--HSNIVKLYDVIHTKKRLVLVFEHLDQDLK- 87

Query: 215 EFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEINPNISDF 274
                 +  +           + +++  +       ++HRD K  N+L++ E    I+DF
Sbjct: 88  ---KLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLINREGELKIADF 144

Query: 275 GPARIFGDQTEEVTGRVIGTQTLKTVPELLQAWK-------LWSEGDPMEIIDEQTKMKG 327
           G AR FG    + T  ++        P++L   K       +WS G    I  E      
Sbjct: 145 GLARAFGIPVRKYTHEIV--TLWYRAPDVLMGSKKYSTTIDIWSVG---CIFAEMVNGTP 199

Query: 328 PFSADELVKCIE-VGLLCVQQRIEDWPTMSSVLTMLSNESIKVPQPEEVCFATSSS 382
            F        +  +  +      ++WP ++ +     N ++  P P E        
Sbjct: 200 LFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNFTVYEPLPWESFLKGLDE 255

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} Length = 318

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 48.4 bits (114), Expect = 6e-07
 Identities = 43/247 (17%), Positives = 84/247 (34%), Gaps = 23/247 (9%)

Query: 143 RGMNLRTGWNQNIKAWNLEKSDTPQLVLWRRTEKVFRSWNG------ISGGCKRNWEADC 196
           +  + +TG    +K   +E       +   R  K+ +          I     +    + 
Sbjct: 28  KARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNR 87

Query: 197 GDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDH 256
             G ++L+F+  +  D +            S +  ++  +   + Y+  +   +I+HRD 
Sbjct: 88  CKGSIYLVFDFCE-HDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRN---KILHRDM 143

Query: 257 KTSNVLLDAEINPNISDFGPARIFGDQTEEVTGR---VIGTQTLKTVPELLQAWK----- 308
           K +NVL+  +    ++DFG AR F         R    + T   +    LL         
Sbjct: 144 KAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPI 203

Query: 309 -LWSEGDPMEIIDEQTKMKGPFSADELVKCIE-VGLLCVQQRIEDWPTMSSVLTMLSNES 366
            LW  G    I+ E          +     +  +  LC     E WP + +       E 
Sbjct: 204 DLWGAG---CIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWPNVDNYELYEKLEL 260

Query: 367 IKVPQPE 373
           +K  + +
Sbjct: 261 VKGQKRK 267

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} Length = 292

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 47.3 bits (111), Expect = 1e-06
 Identities = 38/248 (15%), Positives = 81/248 (32%), Gaps = 18/248 (7%)

Query: 143 RGMNLRTGWNQNIKAWNLEKSDTPQLVLWRRTEKVFRSWNGISGGCKRNWEADCGDGEVF 202
           +  N  T     +K   L+  D        R   + +     +    R  +    D ++ 
Sbjct: 20  KAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKN--IVRLHDVLHSDKKLT 77

Query: 203 LMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVL 262
           L+FE        +    F+          +   + +++  L       ++HRD K  N+L
Sbjct: 78  LVFE----FCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLL 133

Query: 263 LDAEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELLQAWK-------LWSEGDP 315
           ++      +++FG AR FG      +  V+        P++L   K       +WS G  
Sbjct: 134 INRNGELKLANFGLARAFGIPVRCYSAEVVTLWYR--PPDVLFGAKLYSTSIDMWSAGCI 191

Query: 316 MEIIDEQTKMKGPFSADELVKCIE-VGLLCVQQRIEDWPTMSSVLTMLSNESIKVPQPEE 374
              +      +  F  +++   ++ +  L      E WP+M+ +                
Sbjct: 192 FAELA--NAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKPYPMYPATTSLV 249

Query: 375 VCFATSSS 382
                 ++
Sbjct: 250 NVVPKLNA 257

>d1xd5a_ b.78.1.1 (A:) Gastrodianin (antifungal protein) {Gastrodia elata [TaxId: 91201]} Length = 112

class: All beta proteins
fold: beta-Prism II
superfamily: alpha-D-mannose-specific plant lectins
family: alpha-D-mannose-specific plant lectins
domain: Gastrodianin (antifungal protein)
species: Gastrodia elata [TaxId: 91201]

 Score = 44.4 bits (104), Expect = 1e-06
 Identities = 23/115 (20%), Positives = 36/115 (31%), Gaps = 15/115 (13%)

Query: 32  DILLAPSTLWGGNSLIPGNSSQSFLVISYKNL--PPLVIWVANRNGSINS---------N 80
           D L +   L  G SL  G             L      +W +  NG  +          N
Sbjct: 2   DRLNSGHQLDTGGSLAEGGYLFIIQNDCNLVLYDNNRAVWASGTNGKASGCVLKMQNDGN 61

Query: 81  LSQDNDLGIIWNVILPRATGSPALQLLVAGNLVLREFSLSHSEGYLWESFDSPSD 135
           L   +    IW     R  G+  L L    N+V+      +S   +W +  +  +
Sbjct: 62  LVIYSGSRAIWASNTNRQNGNYYLILQRDRNVVIY----DNSNNAIWATHTNVGN 112

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} Length = 364

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 46.6 bits (110), Expect = 3e-06
 Identities = 27/168 (16%), Positives = 57/168 (33%), Gaps = 10/168 (5%)

Query: 198 DGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHK 257
             ++  + + +   D      +       + +      I   + ++       +++RD K
Sbjct: 79  PDKLSFILDLMNGGDLHYHLSQHGV-FSEADMRFYAAEIILGLEHM---HNRFVVYRDLK 134

Query: 258 TSNVLLDAEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELLQAWKLWSEGDP-- 315
            +N+LLD   +  ISD G A  F  +        +GT        L +     S  D   
Sbjct: 135 PANILLDEHGHVRISDLGLACDFSKKK---PHASVGTHGYMAPEVLQKGVAYDSSADWFS 191

Query: 316 -MEIIDEQTKMKGPFSADELVKCIEVGLLCVQQRIEDWPTMSSVLTML 362
              ++ +  +   PF   +     E+  + +   +E   + S  L  L
Sbjct: 192 LGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPDSFSPELRSL 239

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

 Score = 44.8 bits (105), Expect = 8e-06
 Identities = 40/264 (15%), Positives = 69/264 (26%), Gaps = 53/264 (20%)

Query: 143 RGMNLRTGWNQNIKAWNLEKSDTPQLVLWRRTEKVFRSWNGISGGCKRNWEADCG--DGE 200
            G NL       IK     +SD PQL    RT K+     GI            G     
Sbjct: 23  EGTNLLNNQQVAIKFEP-RRSDAPQLRDEYRTYKLLAGCTGI------PNVYYFGQEGLH 75

Query: 201 VFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSN 260
             L+ +   L   S       C +  S  T +     +++  +       +++RD K  N
Sbjct: 76  NVLVID---LLGPSLEDLLDLCGRKFSVKT-VAMAAKQMLARVQSIHEKSLVYRDIKPDN 131

Query: 261 VLLDAEINPN-----ISDFGPARIFGDQTEEVTGRVIGTQTLK-----TVPELLQAWK-- 308
            L+    + N     + DFG  + + D   +        + L               +  
Sbjct: 132 FLIGRPNSKNANMIYVVDFGMVKFYRDPVTKQHIPYREKKNLSGTARYMSINTHLGREQS 191

Query: 309 ----LWSEG-------------------DPMEIIDEQTKMKGPFSADELVKCI-----EV 340
               L + G                      +  +   + K      EL         + 
Sbjct: 192 RRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQSTPLRELCAGFPEEFYKY 251

Query: 341 GLLCVQQRIEDWPTMSSVLTMLSN 364
                    +  P    +  + S 
Sbjct: 252 MHYARNLAFDATPDYDYLQGLFSK 275

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 44.8 bits (105), Expect = 1e-05
 Identities = 32/137 (23%), Positives = 52/137 (37%), Gaps = 14/137 (10%)

Query: 229 VTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEINPNISDFGPARIFGDQTEEVT 288
                  I     YL     L++I+RD K  N+L+D +    ++DFG A+    +T  + 
Sbjct: 143 ARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWTLC 199

Query: 289 GRVIGTQTLKTVPELLQAWKLWSEGDPME---IIDEQTKMKGPFSADELVKCIEVGLLCV 345
           G           PE++ +       D      +I E      PF AD+ ++  E     V
Sbjct: 200 GTPEALA-----PEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEK---IV 251

Query: 346 QQRIEDWPTMSSVLTML 362
             ++      SS L  L
Sbjct: 252 SGKVRFPSHFSSDLKDL 268

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

 Score = 44.3 bits (104), Expect = 1e-05
 Identities = 25/92 (27%), Positives = 42/92 (45%), Gaps = 6/92 (6%)

Query: 229 VTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEINPNISDFGPARIFGDQTEEVT 288
              I+  +  VI  L    +L I+HRD K  N+LLD ++N  ++DFG +        E  
Sbjct: 112 TRKIMRALLEVICAL---HKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQL--DPGEKL 166

Query: 289 GRVIGTQTLKTVPELLQAWKLWSEGDPMEIID 320
             V GT +    PE+++     +     + +D
Sbjct: 167 REVCGTPSYLA-PEIIECSMNDNHPGYGKEVD 197

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.1 bits (101), Expect = 3e-05
 Identities = 25/171 (14%), Positives = 67/171 (39%), Gaps = 16/171 (9%)

Query: 198 DGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHK 257
             E++++ E +     ++   E    +    +  +     + + +L      ++IHRD K
Sbjct: 89  GDELWVVMEYLAGGSLTDVVTETCMDE--GQIAAVCRECLQALEFL---HSNQVIHRDIK 143

Query: 258 TSNVLLDAEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELLQAWK------LWS 311
           + N+LL  + +  ++DFG         +     ++GT      PE++          +WS
Sbjct: 144 SDNILLGMDGSVKLTDFGFCAQI-TPEQSKRSTMVGTPYWMA-PEVVTRKAYGPKVDIWS 201

Query: 312 EGDPMEIIDEQTKMKGPFSADELVKCIEVGLLCVQQRIEDWPTMSSVLTML 362
            G    +  E  + + P+  +  ++ + +        +++   +S++    
Sbjct: 202 LG---IMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDF 249

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.9 bits (100), Expect = 3e-05
 Identities = 37/159 (23%), Positives = 62/159 (38%), Gaps = 13/159 (8%)

Query: 232 ILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEINPNISDFGPARIFGDQTEEVTGRV 291
           I   +   +  L    +  I+HRD K +N+LLD      ++DFG A+ FG      T +V
Sbjct: 102 IKAYMLMTLQGLEYLHQHWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYTHQV 161

Query: 292 IGTQTLKTVPELLQAWK-------LWSEGDPM-EIIDEQTKMKGPFSADELVKCIEVGLL 343
           +        PELL   +       +W+ G  + E++     + G    D+L +  E    
Sbjct: 162 VTRWYR--APELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFET--- 216

Query: 344 CVQQRIEDWPTMSSVLTMLSNESIKVPQPEEVCFATSSS 382
                 E WP M S+   ++ +S        +  A    
Sbjct: 217 LGTPTEEQWPDMCSLPDYVTFKSFPGIPLHHIFSAAGDD 255

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.8 bits (100), Expect = 3e-05
 Identities = 37/243 (15%), Positives = 71/243 (29%), Gaps = 37/243 (15%)

Query: 143 RGMNLRTGWNQNIKAWNLEK----SDTPQLVLWRRTEKVFRSWNGISGGCKRNWEADCGD 198
            G+ +       IK    ++     + P          + +  +    G  R  +     
Sbjct: 22  SGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERP 81

Query: 199 GEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKT 258
               L+ E  +             +       +  + +   + +        ++HRD K 
Sbjct: 82  DSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHN---CGVLHRDIKD 138

Query: 259 SNVLLDAE-INPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELLQAWK-------LW 310
            N+L+D       + DFG   +  D          GT+     PE ++  +       +W
Sbjct: 139 ENILIDLNRGELKLIDFGSGALLKDTV---YTDFDGTRVYSP-PEWIRYHRYHGRSAAVW 194

Query: 311 SEG--------------DPMEIIDEQTKMKGPFSADELVKCIEVGLLCVQQRIEDWPTMS 356
           S G                 EII  Q   +   S++    C  +   C+  R  D PT  
Sbjct: 195 SLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSE----CQHLIRWCLALRPSDRPTFE 250

Query: 357 SVL 359
            + 
Sbjct: 251 EIQ 253

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} Length = 320

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.8 bits (100), Expect = 3e-05
 Identities = 31/154 (20%), Positives = 47/154 (30%), Gaps = 7/154 (4%)

Query: 143 RGMNLRTGWNQNIKAWNLEKSDTPQLVLWRRTEKVFRSWNGISGGCKRNWEADCGDGEVF 202
                +T     IKA   +       V     EK   S           +        +F
Sbjct: 20  LAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLF 79

Query: 203 LMFEGIKLPDKSEFTCEFECSKYS-SYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNV 261
            + E   L           C K+  S  T     I   + +L       I++RD K  N+
Sbjct: 80  FVME--YLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSKG---IVYRDLKLDNI 134

Query: 262 LLDAEINPNISDFGPARIFGDQTEEVTGRVIGTQ 295
           LLD + +  I+DFG  +       +      GT 
Sbjct: 135 LLDKDGHIKIADFGMCKENMLGDAKTN-TFCGTP 167

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

 Score = 42.8 bits (100), Expect = 4e-05
 Identities = 21/187 (11%), Positives = 51/187 (27%), Gaps = 28/187 (14%)

Query: 198 DGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHK 257
           D E+ +++E +   +  E   +             +  + + + ++ E++    +H D K
Sbjct: 95  DNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENN---YVHLDLK 151

Query: 258 TSNVLLDAEINPNI--SDFGPARIFGDQT--------------EEVTGRVIGTQT----- 296
             N++   + +  +   DFG       +               E   G+ +G  T     
Sbjct: 152 PENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSV 211

Query: 297 LKTVPELLQAWKLWSEGDPMEIIDEQTKMKGPFSADELVK----CIEVGLLCVQQRIEDW 352
                 LL     +   +  E +                       +     +       
Sbjct: 212 GVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDDSAFSGISEDGKDFIRKLLLADPNTR 271

Query: 353 PTMSSVL 359
            T+   L
Sbjct: 272 MTIHQAL 278

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} Length = 305

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.2 bits (98), Expect = 6e-05
 Identities = 21/97 (21%), Positives = 46/97 (47%), Gaps = 5/97 (5%)

Query: 198 DGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHK 257
           + ++ L+FE +     +      E    +  + ++++ + R + +L       ++HRD K
Sbjct: 87  ETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHR---VVHRDLK 143

Query: 258 TSNVLLDAEINPNISDFGPARIFGDQTEEVTGRVIGT 294
             N+L+ +     ++DFG ARI+  Q    +  V+ T
Sbjct: 144 PQNILVTSSGQIKLADFGLARIYSFQMALTS--VVVT 178

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} Length = 352

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

 Score = 40.8 bits (95), Expect = 2e-04
 Identities = 27/187 (14%), Positives = 55/187 (29%), Gaps = 28/187 (14%)

Query: 198 DGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHK 257
             E+ L+ E +   +  +     +     + V N +      + ++       I+H D K
Sbjct: 98  KYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHM---HEHSIVHLDIK 154

Query: 258 TSNVLLDAEINPNI--SDFGPARIFGDQT--------------EEVTGRVIGTQTL---- 297
             N++ + +   ++   DFG A                     E V    +G  T     
Sbjct: 155 PENIMCETKKASSVKIIDFGLATKLNPDEIVKVTTATAEFAAPEIVDREPVGFYTDMWAI 214

Query: 298 -KTVPELLQAWKLWSEGDPMEIIDEQTKMKGPFSADELVK----CIEVGLLCVQQRIEDW 352
                 LL     ++  D +E +    +    F  D          +     +Q+     
Sbjct: 215 GVLGYVLLSGLSPFAGEDDLETLQNVKRCDWEFDEDAFSSVSPEAKDFIKNLLQKEPRKR 274

Query: 353 PTMSSVL 359
            T+   L
Sbjct: 275 LTVHDAL 281

>d1jpca_ b.78.1.1 (A:) Lectin (agglutinin) {Snowdrop (Galanthus nivalis) [TaxId: 4670]} Length = 108

class: All beta proteins
fold: beta-Prism II
superfamily: alpha-D-mannose-specific plant lectins
family: alpha-D-mannose-specific plant lectins
domain: Lectin (agglutinin)
species: Snowdrop (Galanthus nivalis) [TaxId: 4670]

 Score = 38.1 bits (88), Expect = 2e-04
 Identities = 24/115 (20%), Positives = 34/115 (29%), Gaps = 25/115 (21%)

Query: 32  DILLAPSTLWGGNSLIPGNSSQSF-----LVISYKNLPPLVIWVANRNGSINS------- 79
           +IL +  TL  G  L  G+          LV+   + P   IW  N  G   S       
Sbjct: 2   NILYSGETLSTGEFLNYGSFVFIMQEDCNLVLYDVDKP---IWATNTGGLSRSCFLSMQT 58

Query: 80  --NLS-QDNDLGIIWNVILPRATGSPALQLLVAGNLVLREFSLSHSEGYLWESFD 131
             NL   +     IW        G+    L    N+V+            W +  
Sbjct: 59  DGNLVVYNPSNKPIWASNTGGQNGNYVCILQKDRNVVIYGTD-------RWATGT 106

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.6 bits (94), Expect = 2e-04
 Identities = 18/58 (31%), Positives = 30/58 (51%)

Query: 236 IARVILYLPEDSRLEIIHRDHKTSNVLLDAEINPNISDFGPARIFGDQTEEVTGRVIG 293
           +  ++L L    +L II+RD K  N+LLD+  +  ++DFG ++ F     E      G
Sbjct: 135 VGEIVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERAYDFCG 192

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.2 bits (93), Expect = 3e-04
 Identities = 15/63 (23%), Positives = 28/63 (44%), Gaps = 1/63 (1%)

Query: 232 ILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEINPNISDFGPARIFGDQTEEVTGRV 291
             +  A ++  L      ++++RD K  N++LD + +  I+DFG  +  G          
Sbjct: 107 ARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCK-EGISDGATMKTF 165

Query: 292 IGT 294
            GT
Sbjct: 166 CGT 168

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 39.8 bits (92), Expect = 3e-04
 Identities = 45/273 (16%), Positives = 74/273 (27%), Gaps = 47/273 (17%)

Query: 143 RGMNLRTGWNQNIKAWNLEKSDTPQLVLWRRTEKVFRSWNGISGGCKRNWEADCGDGEVF 202
            G ++  G    IK   ++    PQL +  +  K+ +   GI                  
Sbjct: 25  LGTDIAAGEEVAIKLECVKTKH-PQLHIESKIYKMMQGGVGI----PTIRWCGAEGDYNV 79

Query: 203 LMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVL 262
           ++ E   L   S       CS+  S    +L    ++I  +        IHRD K  N L
Sbjct: 80  MVME---LLGPSLEDLFNFCSRKFSL-KTVLLLADQMISRIEYIHSKNFIHRDVKPDNFL 135

Query: 263 ---LDAEINPNISDFGPARIFGDQTEEVTGRVIGTQTLK-----TVPELLQAWK------ 308
                      I DFG A+ + D            + L               +      
Sbjct: 136 MGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDD 195

Query: 309 LWSEG-------------------DPMEIIDEQTKMKGPFSADELVKCI-----EVGLLC 344
           L S G                      +  +  ++ K     + L K            C
Sbjct: 196 LESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVLCKGYPSEFATYLNFC 255

Query: 345 VQQRIEDWPTMSSVLTMLSNESIKVPQPEEVCF 377
              R +D P  S +  +  N   +     +  F
Sbjct: 256 RSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVF 288

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} Length = 345

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.8 bits (92), Expect = 3e-04
 Identities = 21/82 (25%), Positives = 36/82 (43%), Gaps = 1/82 (1%)

Query: 232 ILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEINPNISDFGPARIFG-DQTEEVTGR 290
           I Y + +++  L       ++HRD K SN+LL+   +  I DFG AR+   D        
Sbjct: 111 ICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLT 170

Query: 291 VIGTQTLKTVPELLQAWKLWSE 312
                     PE++   K +++
Sbjct: 171 EYVATRWYRAPEIMLNSKGYTK 192

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} Length = 335

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.3 bits (91), Expect = 6e-04
 Identities = 19/96 (19%), Positives = 36/96 (37%), Gaps = 7/96 (7%)

Query: 197 GDGEVFLMFEGIKLPDKSEFTCEFECSKYS-SYVTNILYGIARVILYLPEDSRLEIIHRD 255
           G   + ++ E +   +      +     ++    + I+  I   I YL     + I HRD
Sbjct: 80  GRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYL---HSINIAHRD 136

Query: 256 HKTSNVLLDAEINPN---ISDFGPARIFGDQTEEVT 288
            K  N+L  ++       ++DFG A+         T
Sbjct: 137 VKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTT 172

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.2 bits (88), Expect = 0.001
 Identities = 30/162 (18%), Positives = 55/162 (33%), Gaps = 24/162 (14%)

Query: 227 SYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEINPN-ISDFGPARIFGDQTE 285
            YV   +Y + R + Y+       I HRD K  N+LLD +     + DFG A+       
Sbjct: 122 IYVKLYMYQLFRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP 178

Query: 286 EVT----------GRVIGTQTL----------KTVPELLQAWKLWSEGDPMEIIDEQTKM 325
            V+            + G                + ELL    ++     ++ + E  K+
Sbjct: 179 NVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKV 238

Query: 326 KGPFSADELVKCIEVGLLCVQQRIEDWPTMSSVLTMLSNESI 367
            G  + +++ +           +I+  P           E+I
Sbjct: 239 LGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAI 280

>d1dlpa2 b.78.1.1 (A:116-235) Fetuin-binding protein Scafet precursor {Bluebell (Scilla campanulata) [TaxId: 81759]} Length = 120

class: All beta proteins
fold: beta-Prism II
superfamily: alpha-D-mannose-specific plant lectins
family: alpha-D-mannose-specific plant lectins
domain: Fetuin-binding protein Scafet precursor
species: Bluebell (Scilla campanulata) [TaxId: 81759]

 Score = 34.9 bits (80), Expect = 0.003
 Identities = 16/117 (13%), Positives = 32/117 (27%), Gaps = 20/117 (17%)

Query: 45  SLIPGNSSQSFLVISYKNLPPLVIWVANRNGSINS-----------NLSQDNDLGIIWNV 93
           S++  N+  S L  +  N         +   S+             NL   +    +W+ 
Sbjct: 2   SVVVANNGNSILYSTQGNDNHP--QTLHATQSLQLSPYRLSMETDCNLVLFDRDDRVWST 59

Query: 94  ILPRATGSPALQLLVAGNLVLREFSLSHSEGYLWESFD--SPSDTILPGMKRGMNLR 148
                       L   G + +     ++    +W S +  S    +        NL 
Sbjct: 60  NTAGKGTGCRAVLQPNGRMDVL----TNQNIAVWTSGNSRSAGRYVFVLQPDR-NLA 111

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 36.3 bits (83), Expect = 0.004
 Identities = 23/65 (35%), Positives = 30/65 (46%), Gaps = 2/65 (3%)

Query: 232 ILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEINPNISDFGPARIFGDQTEEV--TG 289
            +  IA     L    +  IIHRD K +N+++ A     + DFG AR   D    V  T 
Sbjct: 113 AIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTA 172

Query: 290 RVIGT 294
            VIGT
Sbjct: 173 AVIGT 177

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	392
d1uwha_	276	B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}	99.96
d1sm2a_	263	Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie	99.95
d1qpca_	272	Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax	99.95
d1jpaa_	299	ephb2 receptor tyrosine kinase {Mouse (Mus musculu	99.95
d1mqba_	283	epha2 receptor tyrosine kinase {Human (Homo sapien	99.95
d1opja_	287	Abelsone tyrosine kinase (abl) {Mouse (Mus musculu	99.95
d1rjba_	325	Fl cytokine receptor {Human (Homo sapiens) [TaxId:	99.95
d1nvra_	271	Cell cycle checkpoint kinase chk1 {Human (Homo sap	99.95
d1fmka3	285	c-src tyrosine kinase {Human (Homo sapiens) [TaxId	99.95
d1u59a_	285	Tyrosine-protein kinase ZAP-70 {Human (Homo sapien	99.94
d1xbba_	277	Tyrosine-protein kinase SYK {Human (Homo sapiens)	99.94
d2j4za1	263	Aurora-related kinase 1 (aurora-2) {Human (Homo sa	99.94
d1ywna1	299	Vascular endothelial growth factor receptor 2 (kdr	99.94
d1yhwa1	293	pak1 {Human (Homo sapiens) [TaxId: 9606]}	99.93
d2jfla1	288	STE20-like serine/threonine-protein kinase, SLK {H	99.93
d1k2pa_	258	Bruton's tyrosine kinase (Btk) {Human (Homo sapien	99.93
d1mp8a_	273	Focal adhesion kinase 1 (fak) {Human (Homo sapiens	99.93
d1uu3a_	288	3-phosphoinositide dependent protein kinase-1 Pdk1	99.93
d1s9ja_	322	Dual specificity mitogen-activated protein kinase	99.93
d1t4ha_	270	Protein kinase wnk1 {Human (Homo sapiens) [TaxId:	99.93
d2java1	269	Serine/threonine-protein kinase Nek2 {Human (Homo	99.93
d1koaa2	350	Twitchin, kinase domain {Caenorhabditis elegans, p	99.93
d1ua2a_	299	Cell division protein kinase 7, CDK7 {Human (Homo	99.93
d1koba_	352	Twitchin, kinase domain {California sea hare (Aply	99.92
d1fgka_	299	Fibroblast growth factor receptor 1 {Human (Homo s	99.92
d1lufa_	301	Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax	99.92
d1u5ra_	309	Serine/threonine protein kinase TAO2 {Rat (Rattus	99.92
d1a06a_	307	Calmodulin-dependent protein kinase {Rat (Rattus n	99.92
d1xkka_	317	EGF receptor tyrosine kinase, Erbb-1 {Human (Homo	99.92
d1p4oa_	308	Insulin-like growth factor 1 receptor {Human (Homo	99.92
d1r0pa_	311	Hepatocyte growth factor receptor, c-MET {Human (H	99.92
d1u46a_	273	Activated CDC42 kinase 1, ACK1 {Human (Homo sapien	99.92
d1t46a_	311	c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]	99.92
d1phka_	277	gamma-subunit of glycogen phosphorylase kinase (Ph	99.91
d1omwa3	364	G-protein coupled receptor kinase 2 {Cow (Bos taur	99.91
d1vjya_	303	Type I TGF-beta receptor R4 {Human (Homo sapiens)	99.91
d1o6la_	337	Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9	99.91
d1jksa_	293	Death-associated protein kinase, Dap {Human (Homo	99.91
d1fvra_	309	Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}	99.91
d1fota_	316	cAMP-dependent PK, catalytic subunit {Baker's yeas	99.91
d1o6ya_	277	Mycobacterial protein kinase PknB, catalytic domai	99.91
d1tkia_	321	Titin, kinase domain {Human (Homo sapiens) [TaxId:	99.91
d1rdqe_	350	cAMP-dependent PK, catalytic subunit {Mouse (Mus m	99.91
d1gz8a_	298	Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [T	99.9
d1xwsa_	273	Proto-oncogene serine/threonine-protein kinase Pim	99.9
d1byga_	262	Carboxyl-terminal src kinase (csk) {Human (Homo sa	99.9
d1xjda_	320	Protein kinase C, theta type {Human (Homo sapiens)	99.9
d2ozaa1	335	MAP kinase activated protein kinase 2, mapkap2 {Hu	99.9
d1blxa_	305	Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [T	99.9
d1ob3a_	286	Cyclin-dependent PK, CDK2 {(Plasmodium falciparum)	99.88
d1q5ka_	350	Glycogen synthase kinase-3 beta (Gsk3b) {Human (Ho	99.87
d3blha1	318	Cell division protein kinase 9, CDK9 {Human (Homo	99.87
d1ckia_	299	Casein kinase-1, CK1 {Rat (Rattus norvegicus) [Tax	99.86
d1vzoa_	322	Ribosomal protein S6 kinase alpha 5, Msk1 {Human (	99.86
d1cm8a_	346	MAP kinase p38-gamma {Human (Homo sapiens) [TaxId:	99.86
d1pmea_	345	MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606	99.86
d1csna_	293	Casein kinase-1, CK1 {Fission yeast (Schizosacchar	99.85
d3bqca1	328	Protein kinase CK2, alpha subunit {Rattus norvegic	99.85
d1unla_	292	Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [T	99.84
d2gfsa1	348	MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]	99.81
d2b1pa1	355	c-jun N-terminal kinase (jnk3s) {Human (Homo sapie	99.8
d1q8ya_	362	Sky1p {Baker's yeast (Saccharomyces cerevisiae) [T	99.72
d1xd5a_	112	Gastrodianin (antifungal protein) {Gastrodia elata	99.48
d1jpca_	108	Lectin (agglutinin) {Snowdrop (Galanthus nivalis)	99.36
d1kj1a_	109	Lectin (agglutinin) {Garlic (Allium sativum) [TaxI	99.34
d1dlpa2	120	Fetuin-binding protein Scafet precursor {Bluebell	99.23
d1zara2	191	Rio2 serine protein kinase C-terminal domain {Arch	99.1
d1b2pa_	119	Lectin (agglutinin) {Bluebell (Scilla campanulata)	98.88
d1dlpa1	115	Fetuin-binding protein Scafet precursor {Bluebell	98.68
d1dlpa1	115	Fetuin-binding protein Scafet precursor {Bluebell	98.59
d1b2pa_	119	Lectin (agglutinin) {Bluebell (Scilla campanulata)	97.77
d1dlpa2	120	Fetuin-binding protein Scafet precursor {Bluebell	97.45
d1jpca_	108	Lectin (agglutinin) {Snowdrop (Galanthus nivalis)	97.44
d1kj1a_	109	Lectin (agglutinin) {Garlic (Allium sativum) [TaxI	97.32
d1xd5a_	112	Gastrodianin (antifungal protein) {Gastrodia elata	96.94
d1nd4a_	255	Aminoglycoside 3'-phosphotransferase IIa (Kanamyci	91.11
d2ppqa1	316	Homoserine kinase ThrB {Agrobacterium tumefaciens	85.46
d1j7la_	263	Type IIIa 3',5"-aminoglycoside phosphotransferase	81.51

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=1.9e-30  Score=240.58  Aligned_cols=181  Identities=16%  Similarity=0.185  Sum_probs=136.3

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEc
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLD  264 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~  264 (392)
                      |++.++.... |.+++.+++|||+++|++............+..++.|+.|||+||.|||++   +|+||||||+|||++
T Consensus        63 HpnIv~~~~~-~~~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~gl~yLH~~---~ivHrDlKp~NiLl~  138 (276)
T d1uwha_          63 HVNILLFMGY-STAPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAK---SIIHRDLKSNNIFLH  138 (276)
T ss_dssp             CTTBCCEEEE-ECSSSCEEEEECCCEEEHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEE
T ss_pred             CCCEeeeeEE-EeccEEEEEEecCCCCCHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHhcC---CEeccccCHHHEEEc
Confidence            7777766554 446779999999999999876655444445666899999999999999998   899999999999999


Q ss_pred             CCCCCeEeeeeceEEeCC-CCcceeceeeecccccCchhHH---------HHHHHhcCCCcc-eeecccccCCCCCCHHH
Q 045577          265 AEINPNISDFGPARIFGD-QTEEVTGRVIGTQTLKTVPELL---------QAWKLWSEGDPM-EIIDEQTKMKGPFSADE  333 (392)
Q Consensus       265 ~~~~~kl~DFGla~~~~~-~~~~~~~~~~gt~~y~a~~~~~---------~~~diws~G~v~-~~ld~~~~~~~~~~~~~  333 (392)
                      .++.+||+|||+++.... ..........||+.||| ||+.         .+.|+||.|+++ +++.++.++.+..+...
T Consensus       139 ~~~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~A-PE~l~~~~~~~~~~~sDiwS~Gv~l~el~tg~~Pf~~~~~~~~  217 (276)
T d1uwha_         139 EDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMA-PEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQ  217 (276)
T ss_dssp             TTSSEEECCCCCSCC------------CCCCGGGCC-HHHHTTCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHH
T ss_pred             CCCCEEEccccceeeccccCCcccccccccCcccCC-HHHHhcccCCCCCchhhhhhhHHHHHHHHHCCCCCCCCChHHH
Confidence            999999999999987652 22233345689999999 7764         478999999976 56666544433222221


Q ss_pred             ---------------------HHHHHHHHHhhcccCcCCCCCHHHHHHHHccCCCCCC
Q 045577          334 ---------------------LVKCIEVGLLCVQQRIEDWPTMSSVLTMLSNESIKVP  370 (392)
Q Consensus       334 ---------------------~~~~~~i~~~Cl~~dp~~RPsm~eVv~~L~~~~~~~~  370 (392)
                                           ...+.+++.+||+.||++|||+.+|++.|+.....+|
T Consensus       218 ~~~~~~~~~~~p~~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~~il~~Le~l~~~~P  275 (276)
T d1uwha_         218 IIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIELLARSLP  275 (276)
T ss_dssp             HHHHHHHTSCCCCGGGSCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTCC
T ss_pred             HHHHHhcCCCCCcchhccccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHHcCC
Confidence                                 2356678889999999999999999999987754444

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=1.6e-29  Score=232.59  Aligned_cols=177  Identities=21%  Similarity=0.233  Sum_probs=129.0

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEc
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLD  264 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~  264 (392)
                      |++.++.......++..|+||||+++|++............+..++.++.|||+||.|||++   +|+||||||+|||++
T Consensus        59 HpnIv~~~g~~~~~~~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~i~~qia~gl~~lH~~---~iiHrDlKp~Nill~  135 (263)
T d1sm2a_          59 HPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEA---CVIHRDLAARNCLVG  135 (263)
T ss_dssp             CTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCTTCSGGGEEEC
T ss_pred             CCCcccccceeccCCceEEEEEecCCCcHHHHhhccccCCCHHHHHHHHHHHHHHHHhhhcc---ceeecccchhheeec
Confidence            77777777766556789999999999999886666555556666889999999999999998   899999999999999


Q ss_pred             CCCCCeEeeeeceEEeCCCCcceeceeeecccccCchhHH------HHHHHhcCCCcc-eeecccccCCCCCCHHH----
Q 045577          265 AEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIIDEQTKMKGPFSADE----  333 (392)
Q Consensus       265 ~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld~~~~~~~~~~~~~----  333 (392)
                      .++.+||+|||+++..............||+.||| ||+.      .+.|+||.|+++ +++..+..+....+..+    
T Consensus       136 ~~~~~Kl~DFGla~~~~~~~~~~~~~~~gt~~y~a-PE~l~~~~~~~k~DVwS~Gvil~el~t~~~~~~~~~~~~~~~~~  214 (263)
T d1sm2a_         136 ENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWAS-PEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVED  214 (263)
T ss_dssp             GGGCEEECSCC------------------CTTSCC-HHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSCCHHHHHHH
T ss_pred             CCCCeEecccchheeccCCCceeecceecCcccCC-hHHhcCCCCCchhhhcchHHHHHHHHHCCCCCCCCCCHHHHHHH
Confidence            99999999999998775433333344678999999 7765      478999999987 45553222222222221    


Q ss_pred             -------------HHHHHHHHHhhcccCcCCCCCHHHHHHHHccC
Q 045577          334 -------------LVKCIEVGLLCVQQRIEDWPTMSSVLTMLSNE  365 (392)
Q Consensus       334 -------------~~~~~~i~~~Cl~~dp~~RPsm~eVv~~L~~~  365 (392)
                                   ..++.+++..||+.||++||||++|++.|++.
T Consensus       215 i~~~~~~~~p~~~~~~l~~li~~cl~~~p~~Rps~~~il~~L~~i  259 (263)
T d1sm2a_         215 ISTGFRLYKPRLASTHVYQIMNHCWKERPEDRPAFSRLLRQLAEI  259 (263)
T ss_dssp             HHHTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             HHhcCCCCCccccCHHHHHHHHHHccCCHhHCcCHHHHHHHHHHH
Confidence                         23566788899999999999999999999864

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=5e-29  Score=230.43  Aligned_cols=175  Identities=19%  Similarity=0.267  Sum_probs=135.2

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhc-cccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEE
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFEC-SKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLL  263 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~-~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll  263 (392)
                      |++.++.... |.++..|+||||+++|++......... ...+..+++|+.||++||.|||++   +|+||||||+|||+
T Consensus        67 HpnIv~~~g~-~~~~~~~iv~Ey~~~g~L~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~lH~~---~ivHrDiKp~NIll  142 (272)
T d1qpca_          67 HQRLVRLYAV-VTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER---NYIHRDLRAANILV  142 (272)
T ss_dssp             CTTBCCEEEE-ECSSSCEEEEECCTTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEE
T ss_pred             CCCEeEEEee-eccCCeEEEEEeCCCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCccchhheee
Confidence            7788877663 556788999999999999764433332 235556889999999999999998   89999999999999


Q ss_pred             cCCCCCeEeeeeceEEeCCCCcceeceeeecccccCchhHH------HHHHHhcCCCcc-eeecccccCCCCCCH-----
Q 045577          264 DAEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIIDEQTKMKGPFSA-----  331 (392)
Q Consensus       264 ~~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld~~~~~~~~~~~-----  331 (392)
                      +.++.+||+|||+|+.+............||+.||| ||+.      .+.|+||.|+++ +++.++..+......     
T Consensus       143 ~~~~~~Kl~DFGla~~~~~~~~~~~~~~~gt~~y~A-PE~~~~~~~~~~sDvwS~Gvvl~ellt~~~~~~~~~~~~~~~~  221 (272)
T d1qpca_         143 SDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTA-PEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQ  221 (272)
T ss_dssp             CTTSCEEECCCTTCEECSSSCEECCTTCCCCTTTSC-HHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHH
T ss_pred             ecccceeeccccceEEccCCccccccccCCcccccC-hHHHhCCCCCchhhhhhhHHHHHHHHhCCCCCCCCCCHHHHHH
Confidence            999999999999999876444334444678999999 7765      378999999977 455432222111111     


Q ss_pred             ------------HHHHHHHHHHHhhcccCcCCCCCHHHHHHHHcc
Q 045577          332 ------------DELVKCIEVGLLCVQQRIEDWPTMSSVLTMLSN  364 (392)
Q Consensus       332 ------------~~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~L~~  364 (392)
                                  .....+.+++.+||+.||++||||++|+++|+.
T Consensus       222 ~i~~~~~~~~p~~~~~~l~~li~~cl~~~P~~Rpt~~ei~~~L~~  266 (272)
T d1qpca_         222 NLERGYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLED  266 (272)
T ss_dssp             HHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             HHHhcCCCCCcccChHHHHHHHHHHcCCCHhHCcCHHHHHHHhhh
Confidence                        122356778889999999999999999999975

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.95  E-value=6.2e-29  Score=232.91  Aligned_cols=177  Identities=20%  Similarity=0.231  Sum_probs=127.8

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEc
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLD  264 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~  264 (392)
                      |++.++.......++..|++|||+++|++.....+......+..++.++.|||+||.|||++   +|+||||||+|||++
T Consensus        86 HpnIv~l~g~~~~~~~~~iv~Ey~~~g~L~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHrDlKp~NILl~  162 (299)
T d1jpaa_          86 HPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLADM---NYVHRDLAARNILVN  162 (299)
T ss_dssp             CTTBCCEEEEECSSSSCEEEEECCTTEEHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEC
T ss_pred             CCCCccEEEEEeeCCEEEEEEEecCCCcceeeeccccCCCCHHHHHHHHHHHHHHHHHHhhC---CCccCccccceEEEC
Confidence            77888877766566789999999999999876555444455666889999999999999998   899999999999999


Q ss_pred             CCCCCeEeeeeceEEeCCCCcc----eeceeeecccccCchhHH------HHHHHhcCCCcc-eeec-ccccCCCCCC--
Q 045577          265 AEINPNISDFGPARIFGDQTEE----VTGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIID-EQTKMKGPFS--  330 (392)
Q Consensus       265 ~~~~~kl~DFGla~~~~~~~~~----~~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld-~~~~~~~~~~--  330 (392)
                      .++.+||+|||+++.+......    ......||+.||| ||..      .+.|+||+|+++ +++. +.+++.+...  
T Consensus       163 ~~~~~Kl~DFGla~~~~~~~~~~~~~~~~~~~~t~~y~a-PE~~~~~~~~~~sDvwS~Gvvl~el~t~g~~Pf~~~~~~~  241 (299)
T d1jpaa_         163 SNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTA-PEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQD  241 (299)
T ss_dssp             TTCCEEECCC-----------------------CGGGSC-HHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHH
T ss_pred             CCCcEEECCcccceEccCCCCcceeeecccccCCccccC-HHHHhcCCCCcccccccchHHHHHHHhCCCCCCCCCCHHH
Confidence            9999999999999876532211    1122467899999 7765      378999999987 5665 4333332211  


Q ss_pred             --------------HHHHHHHHHHHHhhcccCcCCCCCHHHHHHHHccC
Q 045577          331 --------------ADELVKCIEVGLLCVQQRIEDWPTMSSVLTMLSNE  365 (392)
Q Consensus       331 --------------~~~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~L~~~  365 (392)
                                    .+....+.+++.+||+.||++||||.+|++.|+..
T Consensus       242 ~~~~i~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~ei~~~L~~~  290 (299)
T d1jpaa_         242 VINAIEQDYRLPPPMDCPSALHQLMLDCWQKDRNHRPKFGQIVNTLDKM  290 (299)
T ss_dssp             HHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHH
T ss_pred             HHHHHHcCCCCCCCccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHH
Confidence                          12223566788899999999999999999999864

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=1.5e-28  Score=228.61  Aligned_cols=177  Identities=21%  Similarity=0.246  Sum_probs=130.9

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEc
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLD  264 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~  264 (392)
                      |++.++........+..+++|||+.++++............+..+++++.||+.||.|||+.   +|+||||||+|||++
T Consensus        68 H~nIv~~~g~~~~~~~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~i~~gl~~lH~~---~iiHrDlKp~NILl~  144 (283)
T d1mqba_          68 HHNIIRLEGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANM---NYVHRDLAARNILVN  144 (283)
T ss_dssp             CTTBCCEEEEECSSSSEEEEEECCTTEEHHHHHHHTTTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEC
T ss_pred             CCCEeeeeEEEecCCceEEEEEecccCcchhhhhcccccccHHHHHHHHHHHHHhhhhcccc---ccccCccccceEEEC
Confidence            78888887776667889999999999888776555544455666889999999999999998   899999999999999


Q ss_pred             CCCCCeEeeeeceEEeCCCC--cceeceeeecccccCchhHH------HHHHHhcCCCcc-eeecccccCCCCCC-----
Q 045577          265 AEINPNISDFGPARIFGDQT--EEVTGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIIDEQTKMKGPFS-----  330 (392)
Q Consensus       265 ~~~~~kl~DFGla~~~~~~~--~~~~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld~~~~~~~~~~-----  330 (392)
                      .++.+||+|||+++.+....  ........||+.||| ||+.      .+.|+||.|+++ +++..+..+....+     
T Consensus       145 ~~~~~Kl~DFGla~~~~~~~~~~~~~~~~~gt~~Y~A-PE~l~~~~~~~~sDI~S~Gvil~el~t~~~~~~~~~~~~~~~  223 (283)
T d1mqba_         145 SNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTA-PEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVM  223 (283)
T ss_dssp             TTCCEEECCCCC-----------------CCCGGGSC-HHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHH
T ss_pred             CCCeEEEcccchhhcccCCCccceEeccCCCCccccC-HHHHccCCCCCcccccccHHHHHHHHhCCCCccccCCHHHHH
Confidence            99999999999998765222  122233568999999 7765      378999999987 44443222222222     


Q ss_pred             ------------HHHHHHHHHHHHhhcccCcCCCCCHHHHHHHHccC
Q 045577          331 ------------ADELVKCIEVGLLCVQQRIEDWPTMSSVLTMLSNE  365 (392)
Q Consensus       331 ------------~~~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~L~~~  365 (392)
                                  .+....+.+++.+||+.||++||+|.+|+++|+..
T Consensus       224 ~~i~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~eil~~L~~l  270 (283)
T d1mqba_         224 KAINDGFRLPTPMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKL  270 (283)
T ss_dssp             HHHHTTCCCCCCTTCBHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHH
T ss_pred             HHHhccCCCCCchhhHHHHHHHHHHHCcCCHhHCcCHHHHHHHHHHH
Confidence                        22234577888999999999999999999999875

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.95  E-value=1.2e-28  Score=229.68  Aligned_cols=177  Identities=16%  Similarity=0.184  Sum_probs=136.8

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhh-hccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEE
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEF-ECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLL  263 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~-~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll  263 (392)
                      |++.++.......++..|++|||+++|++.....+. .....+..++.++.||++||.|||++   +|+||||||+|||+
T Consensus        72 HpnIv~~~~~~~~~~~~~iv~E~~~~g~l~~~l~~~~~~~~~~~~~~~i~~qi~~gL~yLH~~---~iiHrDlKp~NILl  148 (287)
T d1opja_          72 HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLV  148 (287)
T ss_dssp             CTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEE
T ss_pred             CCCEecCCccEeeCCeeEEEeecccCcchHHHhhhccccchHHHHHHHHHHHHHHHHHHHHHC---CcccCccccCeEEE
Confidence            777777766555567899999999999987765432 22335556889999999999999998   89999999999999


Q ss_pred             cCCCCCeEeeeeceEEeCCCCcceeceeeecccccCchhHH------HHHHHhcCCCcc-eeecccccCCCCCCHHH---
Q 045577          264 DAEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIIDEQTKMKGPFSADE---  333 (392)
Q Consensus       264 ~~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld~~~~~~~~~~~~~---  333 (392)
                      +.++.+||+|||+++..............|++.||| ||+.      .+.|+||.|+++ +++..+.++....+..+   
T Consensus       149 ~~~~~~Kl~DFG~a~~~~~~~~~~~~~~~g~~~y~a-PE~~~~~~~~~k~DiwS~Gv~l~ell~~~~p~~~~~~~~~~~~  227 (287)
T d1opja_         149 GENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTA-PESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYE  227 (287)
T ss_dssp             CGGGCEEECCCCCTTTCCSSSSEEETTEEECGGGCC-HHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHH
T ss_pred             CCCCcEEEccccceeecCCCCceeeccccccccccC-hHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCcchHHHHHH
Confidence            999999999999998765444444445678999999 7765      378999999976 45543333322222222   


Q ss_pred             --------------HHHHHHHHHhhcccCcCCCCCHHHHHHHHccC
Q 045577          334 --------------LVKCIEVGLLCVQQRIEDWPTMSSVLTMLSNE  365 (392)
Q Consensus       334 --------------~~~~~~i~~~Cl~~dp~~RPsm~eVv~~L~~~  365 (392)
                                    ...+.+++..||+.||++||||.+|++.|+..
T Consensus       228 ~i~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ei~~~L~~~  273 (287)
T d1opja_         228 LLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM  273 (287)
T ss_dssp             HHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHT
T ss_pred             HHhcCCCCCCCccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHH
Confidence                          23566788899999999999999999999876

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=1.5e-28  Score=233.05  Aligned_cols=175  Identities=20%  Similarity=0.185  Sum_probs=136.3

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhc----------------------cccchhhhhHHHHHHHhhhh
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFEC----------------------SKYSSYVTNILYGIARVILY  242 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~----------------------~~~~~~~~~i~~~ia~gL~y  242 (392)
                      |++.++.....-..+..|+||||+++|++.........                      ...+..++.|+.||++||.|
T Consensus       100 HpnIv~l~~~~~~~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~y  179 (325)
T d1rjba_         100 HENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEF  179 (325)
T ss_dssp             CTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHH
T ss_pred             CCcEeEEEEEEeeCCeEEEEEEcCCCCcHHHHHHhccCCCcchhhhhccccccccccccCCCCHHHHHHHHHHHHHHHHH
Confidence            78888887766566789999999999999876543321                      12444578899999999999


Q ss_pred             cCcCCCCceeecccccceeEEcCCCCCeEeeeeceEEeCC-CCcceeceeeecccccCchhHH------HHHHHhcCCCc
Q 045577          243 LPEDSRLEIIHRDHKTSNVLLDAEINPNISDFGPARIFGD-QTEEVTGRVIGTQTLKTVPELL------QAWKLWSEGDP  315 (392)
Q Consensus       243 LH~~~~~~iiHrDlKp~NIll~~~~~~kl~DFGla~~~~~-~~~~~~~~~~gt~~y~a~~~~~------~~~diws~G~v  315 (392)
                      ||++   +|+||||||+||+++.++.+||+|||+|+.... ..........||+.||| ||+.      .+.|+||.|++
T Consensus       180 LH~~---~IiHRDlKp~Nill~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~a-PE~l~~~~~~~~~DiwS~Gvi  255 (325)
T d1rjba_         180 LEFK---SCVHRDLAARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMA-PESLFEGIYTIKSDVWSYGIL  255 (325)
T ss_dssp             HHHT---TEEETTCSGGGEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCC-HHHHHHCCCCHHHHHHHHHHH
T ss_pred             HHhC---CeeeccCchhccccccCCeEEEeeccccccccCCCceeeeccccCCCccCC-hHHHcCCCCCcceeccchhHH
Confidence            9998   899999999999999999999999999987652 22233345778999999 7765      37899999998


Q ss_pred             c-eeec-ccccCCCCCCHHH-----------------HHHHHHHHHhhcccCcCCCCCHHHHHHHHc
Q 045577          316 M-EIID-EQTKMKGPFSADE-----------------LVKCIEVGLLCVQQRIEDWPTMSSVLTMLS  363 (392)
Q Consensus       316 ~-~~ld-~~~~~~~~~~~~~-----------------~~~~~~i~~~Cl~~dp~~RPsm~eVv~~L~  363 (392)
                      + +++. +.+++.+....+.                 ...+.+++.+||+.||++|||++||++.|.
T Consensus       256 l~emlt~g~~Pf~~~~~~~~~~~~~~~~~~~~~p~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~  322 (325)
T d1rjba_         256 LWEIFSLGVNPYPGIPVDANFYKLIQNGFKMDQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFLG  322 (325)
T ss_dssp             HHHHTTTSCCSSTTCCCSHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred             HHHHHhCCCCCCCCCCHHHHHHHHHhcCCCCCCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHh
Confidence            7 4665 4444433222222                 235667888999999999999999999995

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=7e-29  Score=229.23  Aligned_cols=171  Identities=19%  Similarity=0.203  Sum_probs=131.4

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEc
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLD  264 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~  264 (392)
                      |++.++.......++..|+||||++++++.....+.. ...+..+..++.|++.||.|||+.   +|+||||||+|||++
T Consensus        62 HpnIv~~~~~~~~~~~~~ivmEy~~gg~L~~~l~~~~-~l~e~~~~~i~~qi~~al~ylH~~---~IiHrDiKp~NILl~  137 (271)
T d1nvra_          62 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDI-GMPEPDAQRFFHQLMAGVVYLHGI---GITHRDIKPENLLLD  137 (271)
T ss_dssp             CTTBCCEEEEEEETTEEEEEEECCTTEEGGGGSBTTT-BCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEEC
T ss_pred             CCCEeeEeeeeccCceeEEEEeccCCCcHHHHHhcCC-CCCHHHHHHHHHHHHHHHHHHHHc---CCccCcccHHHEEEC
Confidence            6777776665555677899999999999987654433 334555789999999999999998   899999999999999


Q ss_pred             CCCCCeEeeeeceEEeCC-CCcceeceeeecccccCchhHH-------HHHHHhcCCCcc-eeecccccCCCCCCH----
Q 045577          265 AEINPNISDFGPARIFGD-QTEEVTGRVIGTQTLKTVPELL-------QAWKLWSEGDPM-EIIDEQTKMKGPFSA----  331 (392)
Q Consensus       265 ~~~~~kl~DFGla~~~~~-~~~~~~~~~~gt~~y~a~~~~~-------~~~diws~G~v~-~~ld~~~~~~~~~~~----  331 (392)
                      .++.+||+|||+|+.+.. .........+||+.||| ||+.       .+.|+||.|+++ +++.+++++......    
T Consensus       138 ~~~~~KL~DFG~a~~~~~~~~~~~~~~~~GT~~Y~A-PE~~~~~~~~~~~~DiwSlGvilyeml~G~~pf~~~~~~~~~~  216 (271)
T d1nvra_         138 ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVA-PELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEY  216 (271)
T ss_dssp             TTCCEEECCCTTCEECEETTEECCBCCCCSCGGGSC-THHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSSTTSHHH
T ss_pred             CCCCEEEccchhheeeccCCccccccceeeCcCccC-HhHhcCCCCCCCceeeeHhHHHHHHHHhCCCCCCCCChHHHHH
Confidence            999999999999998652 22233345789999999 7654       368999999987 566665444332211    


Q ss_pred             --------------HHHHHHHHHHHhhcccCcCCCCCHHHHHH
Q 045577          332 --------------DELVKCIEVGLLCVQQRIEDWPTMSSVLT  360 (392)
Q Consensus       332 --------------~~~~~~~~i~~~Cl~~dp~~RPsm~eVv~  360 (392)
                                    .....+.+++.+|++.||++|||++|+++
T Consensus       217 ~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~eil~  259 (271)
T d1nvra_         217 SDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARITIPDIKK  259 (271)
T ss_dssp             HHHHTTCTTSTTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred             HHHhcCCCCCCccccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence                          11235567888999999999999999854

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=2.3e-28  Score=227.30  Aligned_cols=186  Identities=15%  Similarity=0.185  Sum_probs=133.6

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhc-cccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEE
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFEC-SKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLL  263 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~-~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll  263 (392)
                      |++.++.... |.+++.|+||||+++|++......... ...+..++.|+.||+.||.|||++   +|+||||||+|||+
T Consensus        71 h~nIv~~~g~-~~~~~~~lv~Ey~~~g~l~~~~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~---~ivH~DlKp~NIll  146 (285)
T d1fmka3          71 HEKLVQLYAV-VSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILV  146 (285)
T ss_dssp             CTTBCCEEEE-ECSSSCEEEECCCTTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEE
T ss_pred             cCCEeEEEEE-EecCCeEEEEEecCCCchhhhhhhcccccchHHHHHHHHHHHHHHHHHHhhh---heecccccceEEEE
Confidence            7777777664 556789999999999988765443322 235566899999999999999998   89999999999999


Q ss_pred             cCCCCCeEeeeeceEEeCCCCcceeceeeecccccCchhHH------HHHHHhcCCCcc-eeecccccCCC---------
Q 045577          264 DAEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIIDEQTKMKG---------  327 (392)
Q Consensus       264 ~~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld~~~~~~~---------  327 (392)
                      +.++.+||+|||+++..............||+.|+| ||+.      .+.|+||.|+++ +++.++..+..         
T Consensus       147 ~~~~~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~a-PE~~~~~~~~~ksDI~S~Giil~el~t~~~p~~~~~~~~~~~~  225 (285)
T d1fmka3         147 GENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTA-PEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLD  225 (285)
T ss_dssp             CGGGCEEECCCCTTC--------------CCGGGSC-HHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHH
T ss_pred             CCCCcEEEcccchhhhccCCCceeeccccccccccC-hHHHhCCCCCcHHhhhcchHHHHHHHhCCCCCCCCCCHHHHHH
Confidence            999999999999998765333333444678999999 7665      378999999987 44443212111         


Q ss_pred             --------CCCHHHHHHHHHHHHhhcccCcCCCCCHHHHHHHHccCCCCCCCCCCc
Q 045577          328 --------PFSADELVKCIEVGLLCVQQRIEDWPTMSSVLTMLSNESIKVPQPEEV  375 (392)
Q Consensus       328 --------~~~~~~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~L~~~~~~~~~p~~p  375 (392)
                              +.+......+.+++.+||+.||++||+|++|+++|+......+++.+|
T Consensus       226 ~i~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~~~~~~~p~~~p  281 (285)
T d1fmka3         226 QVERGYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTEPQYQP  281 (285)
T ss_dssp             HHHTTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTTTSCSCCCCCC
T ss_pred             HHHhcCCCCCCcccCHHHHHHHHHHcccCHhHCcCHHHHHHHHhhhhcCCCCCCCC
Confidence                    122222345677888999999999999999999999875555444444

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=3.2e-28  Score=226.40  Aligned_cols=176  Identities=22%  Similarity=0.216  Sum_probs=134.6

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEc
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLD  264 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~  264 (392)
                      |++.++.... |..+..|+||||+++|++............+..+.+++.||++||.|||++   +|+||||||+||+++
T Consensus        68 HpnIv~l~g~-~~~~~~~lvmE~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~ylH~~---~iiHrDlKp~Nill~  143 (285)
T d1u59a_          68 NPYIVRLIGV-CQAEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEK---NFVHRDLAARNVLLV  143 (285)
T ss_dssp             CTTBCCEEEE-EESSSEEEEEECCTTEEHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEE
T ss_pred             CCCEeeEeee-eccCeEEEEEEeCCCCcHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHhC---CeecCcCchhheeec
Confidence            7777776553 445679999999999999775433333345556899999999999999998   899999999999999


Q ss_pred             CCCCCeEeeeeceEEeCCCCc--ceeceeeecccccCchhHHH------HHHHhcCCCcc-eeec-ccccCCCCCCH---
Q 045577          265 AEINPNISDFGPARIFGDQTE--EVTGRVIGTQTLKTVPELLQ------AWKLWSEGDPM-EIID-EQTKMKGPFSA---  331 (392)
Q Consensus       265 ~~~~~kl~DFGla~~~~~~~~--~~~~~~~gt~~y~a~~~~~~------~~diws~G~v~-~~ld-~~~~~~~~~~~---  331 (392)
                      .++.+||+|||+++.+.....  .......||+.||| ||+..      +.|+||.|+++ |++. +..++.+....   
T Consensus       144 ~~~~~Kl~DFGla~~~~~~~~~~~~~~~~~gt~~y~a-PE~~~~~~~~~ksDVwS~Gv~l~E~lt~G~~Pf~~~~~~~~~  222 (285)
T d1u59a_         144 NRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYA-PECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVM  222 (285)
T ss_dssp             ETTEEEECCCTTCEECTTCSCEECCCCSSCCCGGGCC-HHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTHHHH
T ss_pred             cCCceeeccchhhhcccccccccccccccccCccccC-hHHHhCCCCCccchhhcchHHHHHHHhCCCCCCCCCCHHHHH
Confidence            999999999999998763222  22233568899999 77653      78999999977 4565 44444332222   


Q ss_pred             -------------HHHHHHHHHHHhhcccCcCCCCCHHHHHHHHccC
Q 045577          332 -------------DELVKCIEVGLLCVQQRIEDWPTMSSVLTMLSNE  365 (392)
Q Consensus       332 -------------~~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~L~~~  365 (392)
                                   .....+.+++..||+.+|++||+|.+|++.|+..
T Consensus       223 ~~i~~~~~~~~p~~~~~~l~~li~~cl~~~p~~RPs~~~i~~~L~~~  269 (285)
T d1u59a_         223 AFIEQGKRMECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRAC  269 (285)
T ss_dssp             HHHHTTCCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHH
T ss_pred             HHHHcCCCCCCCCcCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHH
Confidence                         1223566788899999999999999999998753

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=3.6e-28  Score=225.22  Aligned_cols=174  Identities=21%  Similarity=0.254  Sum_probs=132.8

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEc
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLD  264 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~  264 (392)
                      |++.++.... |..+..++||||+++|++.....+... ..+..+++++.||++||.|||++   +|+||||||+|||++
T Consensus        67 HpnIv~~~g~-~~~~~~~lvmE~~~~g~L~~~l~~~~~-l~~~~~~~i~~qi~~gl~ylH~~---~iiHrDlKp~Nill~  141 (277)
T d1xbba_          67 NPYIVRMIGI-CEAESWMLVMEMAELGPLNKYLQQNRH-VKDKNIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLV  141 (277)
T ss_dssp             CTTBCCEEEE-EESSSEEEEEECCTTEEHHHHHHHCTT-CCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEE
T ss_pred             CCCCceEEEE-eccCCEEEEEEcCCCCcHHHHHhhccC-CCHHHHHHHHHHHHHHHhhHHhC---CcccCCCcchhhccc
Confidence            7788877654 456678999999999999876555443 34555899999999999999998   899999999999999


Q ss_pred             CCCCCeEeeeeceEEeCCCCcc--eeceeeecccccCchhHH------HHHHHhcCCCcc-eeec-ccccCCCCC-----
Q 045577          265 AEINPNISDFGPARIFGDQTEE--VTGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIID-EQTKMKGPF-----  329 (392)
Q Consensus       265 ~~~~~kl~DFGla~~~~~~~~~--~~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld-~~~~~~~~~-----  329 (392)
                      .++.+||+|||+++.+......  ......||+.||| ||..      .+.|+||.|+++ +++. +++++.+..     
T Consensus       142 ~~~~~kl~DFGla~~~~~~~~~~~~~~~~~gt~~y~A-PE~l~~~~~~~~sDiwS~Gv~l~ellt~g~~Pf~~~~~~~~~  220 (277)
T d1xbba_         142 TQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYA-PECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVT  220 (277)
T ss_dssp             ETTEEEECCCTTCEECCTTCSEEEC----CCCGGGCC-HHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHH
T ss_pred             ccCcccccchhhhhhccccccccccccccCCCceecC-chhhcCCCCCchhhhccchhhhhHHhhCCCCCCCCCCHHHHH
Confidence            9999999999999987532222  2233578999999 7765      478999999977 4554 443333221     


Q ss_pred             -----------CHHHHHHHHHHHHhhcccCcCCCCCHHHHHHHHcc
Q 045577          330 -----------SADELVKCIEVGLLCVQQRIEDWPTMSSVLTMLSN  364 (392)
Q Consensus       330 -----------~~~~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~L~~  364 (392)
                                 +......+.+++.+||+.||++|||+++|++.|+.
T Consensus       221 ~~i~~~~~~~~p~~~~~~~~~li~~cl~~dp~~RPs~~~i~~~L~~  266 (277)
T d1xbba_         221 AMLEKGERMGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRN  266 (277)
T ss_dssp             HHHHTTCCCCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHH
T ss_pred             HHHHcCCCCCCCcccCHHHHHHHHHHcCCCHhHCcCHHHHHHHhhC
Confidence                       11122356678889999999999999999998864

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=2.8e-28  Score=224.17  Aligned_cols=168  Identities=18%  Similarity=0.198  Sum_probs=132.1

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEc
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLD  264 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~  264 (392)
                      |+++++.....-.++..|+||||+++|++.....+... ..+..+..++.||+.||.|||++   +|+||||||+|||++
T Consensus        65 hpnIv~~~~~~~~~~~~~ivmEy~~~g~L~~~l~~~~~-l~e~~~~~i~~qi~~al~~lH~~---~ivHrDiKp~Nill~  140 (263)
T d2j4za1          65 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYCHSK---RVIHRDIKPENLLLG  140 (263)
T ss_dssp             CTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHHHSS-CCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEC
T ss_pred             CCCCCeEEEEEEECCEEEEEEeecCCCcHHHHHhhcCC-CCHHHHHHHHHHHHHHHHHHHHC---Ceeeeeeccccceec
Confidence            77888777766556789999999999999876655443 34555889999999999999998   899999999999999


Q ss_pred             CCCCCeEeeeeceEEeCCCCcceeceeeecccccCchhHH------HHHHHhcCCCcc-eeecccccCCCCCCHHH----
Q 045577          265 AEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIIDEQTKMKGPFSADE----  333 (392)
Q Consensus       265 ~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld~~~~~~~~~~~~~----  333 (392)
                      .++.+||+|||+++.....   ......||+.||| ||+.      .+.|+||.|+++ +++.++.++.+....+.    
T Consensus       141 ~~~~~kl~DFG~a~~~~~~---~~~~~~Gt~~Y~A-PE~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i  216 (263)
T d2j4za1         141 SAGELKIADFGWSVHAPSS---RRTTLCGTLDYLP-PEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI  216 (263)
T ss_dssp             TTSCEEECCCCSCSCCCCC---CCEETTEEGGGCC-HHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHH
T ss_pred             CCCCEeecccceeeecCCC---cccccCCCCcccC-HHHHcCCCCCchhhhhhHhHHHHHHhcCCCCCCCCCHHHHHHHH
Confidence            9999999999999765422   2234579999999 7766      378999999987 56666554433322111    


Q ss_pred             -----------HHHHHHHHHhhcccCcCCCCCHHHHHH
Q 045577          334 -----------LVKCIEVGLLCVQQRIEDWPTMSSVLT  360 (392)
Q Consensus       334 -----------~~~~~~i~~~Cl~~dp~~RPsm~eVv~  360 (392)
                                 ...+.+++..|++.||++|||+.|+++
T Consensus       217 ~~~~~~~p~~~s~~~~~li~~~L~~dp~~R~t~~eil~  254 (263)
T d2j4za1         217 SRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE  254 (263)
T ss_dssp             HTTCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             HcCCCCCCccCCHHHHHHHHHHccCCHhHCcCHHHHHc
Confidence                       224566888999999999999999975

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=8.5e-28  Score=225.03  Aligned_cols=177  Identities=20%  Similarity=0.194  Sum_probs=125.0

Q ss_pred             CCCccccccCcCC-CCCeeEEecCccCCCcChhhhhhhc---------------cccchhhhhHHHHHHHhhhhcCcCCC
Q 045577          185 SGGCKRNWEADCG-DGEVFLMFEGIKLPDKSEFTCEFEC---------------SKYSSYVTNILYGIARVILYLPEDSR  248 (392)
Q Consensus       185 s~GCvR~~~l~C~-~~~~~lv~e~~~~~~l~~~~~~~~~---------------~~~~~~~~~i~~~ia~gL~yLH~~~~  248 (392)
                      |++.++....... ++..+++|||+++|++.........               ...+..++.++.||++||.|||++  
T Consensus        76 h~~iv~~~~~~~~~~~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~~--  153 (299)
T d1ywna1          76 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR--  153 (299)
T ss_dssp             CTTBCCEEEEECSTTSCCEEEEECCTTCBHHHHHHHTGGGBCC-----------CBCHHHHHHHHHHHHHHHHHHHHT--
T ss_pred             CCeEEEeeeeeccCCCeEEEEEEecCCCcHHHHHHhccccccccccchhhhhcccCCHHHHHHHHHHHHHHHHHHHhC--
Confidence            3444444333322 3468999999999999875543221               123455789999999999999998  


Q ss_pred             CceeecccccceeEEcCCCCCeEeeeeceEEeCCC-CcceeceeeecccccCchhHH------HHHHHhcCCCcc-eeec
Q 045577          249 LEIIHRDHKTSNVLLDAEINPNISDFGPARIFGDQ-TEEVTGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIID  320 (392)
Q Consensus       249 ~~iiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~-~~~~~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld  320 (392)
                       +|+||||||+|||++.++.+||+|||+|+..... .........||+.||| ||+.      .+.|+||.|+++ +++.
T Consensus       154 -~ivHrDlKp~NILl~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~A-PE~l~~~~~~~~sDiwS~Gvil~ellt  231 (299)
T d1ywna1         154 -KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMA-PETIFDRVYTIQSDVWSFGVLLWEIFS  231 (299)
T ss_dssp             -TCCCSCCCGGGEEECGGGCEEECC------CCSCTTSCCTTSCCCGGGGCC-HHHHHHCCCCHHHHHHHHHHHHHHHHT
T ss_pred             -CCcCCcCCccceeECCCCcEEEccCcchhhccccccccccCceeeCccccc-hhHhhcCCCCcccceeehHHHHHHHHh
Confidence             8999999999999999999999999999876532 2233445689999999 7765      478999999987 4554


Q ss_pred             cc-ccCCCCCCHH-----------------HHHHHHHHHHhhcccCcCCCCCHHHHHHHHccC
Q 045577          321 EQ-TKMKGPFSAD-----------------ELVKCIEVGLLCVQQRIEDWPTMSSVLTMLSNE  365 (392)
Q Consensus       321 ~~-~~~~~~~~~~-----------------~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~L~~~  365 (392)
                      .. +.+.+....+                 ....+.+++.+||+.||++|||+.||++.|++.
T Consensus       232 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~eil~~L~~i  294 (299)
T d1ywna1         232 LGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNL  294 (299)
T ss_dssp             TSCCSSTTCCCSHHHHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             CCCCCCCCCCHHHHHHHHHhcCCCCCCCccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHH
Confidence            32 2232221111                 123567788899999999999999999999764

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=1.5e-27  Score=222.56  Aligned_cols=169  Identities=17%  Similarity=0.270  Sum_probs=131.6

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEc
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLD  264 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~  264 (392)
                      |++.++.....-.++..|+||||++++++.....+ .+ ..+..+..++.||+.||.|||++   +|+||||||+|||++
T Consensus        76 HpnIv~~~~~~~~~~~~~ivmEy~~gg~L~~~~~~-~~-l~~~~~~~i~~qi~~aL~yLH~~---~iiHrDiKp~NILl~  150 (293)
T d1yhwa1          76 NPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTE-TC-MDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLG  150 (293)
T ss_dssp             CTTBCCEEEEEEETTEEEEEEECCTTCBHHHHHHH-SC-CCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEC
T ss_pred             CCCEeeEeEEEEECCEEEEEEEecCCCcHHHHhhc-cC-CCHHHHHHHHHHHHHHHHHHHHC---CCcccCCcHHHeEEC
Confidence            77777776655456779999999999999875443 23 44555889999999999999998   899999999999999


Q ss_pred             CCCCCeEeeeeceEEeCCCCcceeceeeecccccCchhHH------HHHHHhcCCCcc-eeecccccCCCCCCHHH----
Q 045577          265 AEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIIDEQTKMKGPFSADE----  333 (392)
Q Consensus       265 ~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld~~~~~~~~~~~~~----  333 (392)
                      .++.+||+|||+++.+.... .......||+.||| ||+.      .+.|+|+.|+++ +++.+..++.+....+.    
T Consensus       151 ~~~~vkl~DFG~a~~~~~~~-~~~~~~~gt~~Y~a-PE~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~~  228 (293)
T d1yhwa1         151 MDGSVKLTDFGFCAQITPEQ-SKRSTMVGTPYWMA-PEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLI  228 (293)
T ss_dssp             TTCCEEECCCTTCEECCSTT-CCBCCCCSCGGGCC-HHHHSSSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHH
T ss_pred             CCCcEeeccchhheeecccc-ccccccccCCCccC-hhhhcCCCCCchhceehHhHHHHHHhhCCCCCCCCCHHHHHHHH
Confidence            99999999999999875322 23344679999999 7765      478999999987 56666544433222211    


Q ss_pred             --------------HHHHHHHHHhhcccCcCCCCCHHHHHH
Q 045577          334 --------------LVKCIEVGLLCVQQRIEDWPTMSSVLT  360 (392)
Q Consensus       334 --------------~~~~~~i~~~Cl~~dp~~RPsm~eVv~  360 (392)
                                    ...+.+++..|++.||++|||+.|+++
T Consensus       229 ~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~  269 (293)
T d1yhwa1         229 ATNGTPELQNPEKLSAIFRDFLNRCLDMDVEKRGSAKELLQ  269 (293)
T ss_dssp             HHHCSCCCSSGGGSCHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred             HhCCCCCCCCcccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence                          234667888999999999999999875

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=4.3e-28  Score=225.85  Aligned_cols=171  Identities=18%  Similarity=0.215  Sum_probs=131.5

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEc
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLD  264 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~  264 (392)
                      |++.++.......++..|+||||+++|++.....+......+..+..++.||+.||.|||++   +|+||||||+|||++
T Consensus        68 HpnIv~l~~~~~~~~~~~lvmEy~~~g~L~~~~~~~~~~l~e~~~~~i~~qi~~gL~ylH~~---~ivHrDiKp~NIll~  144 (288)
T d2jfla1          68 HPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDN---KIIHRDLKAGNILFT  144 (288)
T ss_dssp             CTTBCCEEEEEEETTEEEEEEECCTTEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEC
T ss_pred             CCCCCeEEEEEeeCCeEEEEEecCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CEEEeecChhheeEC
Confidence            67777766655456789999999999999876555443345566889999999999999998   899999999999999


Q ss_pred             CCCCCeEeeeeceEEeCCCCcceeceeeecccccCchhHH-----------HHHHHhcCCCcc-eeecccccCCCCCCH-
Q 045577          265 AEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELL-----------QAWKLWSEGDPM-EIIDEQTKMKGPFSA-  331 (392)
Q Consensus       265 ~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~-----------~~~diws~G~v~-~~ld~~~~~~~~~~~-  331 (392)
                      .++.+||+|||+|+..... ........||+.||| ||+.           .+.|+||.|+++ +++.++.++.+.... 
T Consensus       145 ~~~~~Kl~DFG~a~~~~~~-~~~~~~~~Gt~~y~A-PE~l~~~~~~~~~y~~k~DiwSlGvilyemltg~~Pf~~~~~~~  222 (288)
T d2jfla1         145 LDGDIKLADFGVSAKNTRT-IQRRDSFIGTPYWMA-PEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMR  222 (288)
T ss_dssp             TTSCEEECCCTTCEECHHH-HHHHTCCCSCCTTCC-HHHHTTCSTTTSSTTTHHHHHHHHHHHHHHHHSSCTTTTSCGGG
T ss_pred             CCCCEEEEechhhhccCCC-cccccccccccccCC-HHHHhhcccCCCCCChhhhHHHHHHHHHHHhhCCCCCCCCCHHH
Confidence            9999999999999875421 112234679999999 7765           478999999877 555554444332111 


Q ss_pred             -----------------HHHHHHHHHHHhhcccCcCCCCCHHHHHH
Q 045577          332 -----------------DELVKCIEVGLLCVQQRIEDWPTMSSVLT  360 (392)
Q Consensus       332 -----------------~~~~~~~~i~~~Cl~~dp~~RPsm~eVv~  360 (392)
                                       .....+.+++..|++.||++|||+.|+++
T Consensus       223 ~~~~i~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~ell~  268 (288)
T d2jfla1         223 VLLKIAKSEPPTLAQPSRWSSNFKDFLKKCLEKNVDARWTTSQLLQ  268 (288)
T ss_dssp             HHHHHHHSCCCCCSSGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred             HHHHHHcCCCCCCCccccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence                             12235667888999999999999999875

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=4.3e-27  Score=215.66  Aligned_cols=175  Identities=17%  Similarity=0.229  Sum_probs=136.6

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEc
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLD  264 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~  264 (392)
                      |++.++.....-.++..|+||||+++|++............+..+.+++.|+++||.|||++   +|+||||||+||+++
T Consensus        58 HpnIv~~~g~~~~~~~~~iv~Ey~~~g~l~~~~~~~~~~~~~~~~~~i~~qi~~gl~~LH~~---~iiH~dlk~~Nill~  134 (258)
T d1k2pa_          58 HEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESK---QFLHRDLAARNCLVN  134 (258)
T ss_dssp             CTTBCCEEEEECCSSSEEEEEECCTTEEHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHT---TBCCSCCSGGGEEEC
T ss_pred             CCceeeEEEEEeeCCceEEEEEccCCCcHHHhhhccccCCcHHHHHHHHHHHHHHHHHHhhc---CcccccccceeEEEc
Confidence            77888777655456789999999999998776555544455566889999999999999998   899999999999999


Q ss_pred             CCCCCeEeeeeceEEeCCCCcceeceeeecccccCchhHHH------HHHHhcCCCcc-eeec-ccccCCCCCCHHH---
Q 045577          265 AEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELLQ------AWKLWSEGDPM-EIID-EQTKMKGPFSADE---  333 (392)
Q Consensus       265 ~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~~------~~diws~G~v~-~~ld-~~~~~~~~~~~~~---  333 (392)
                      .++.+||+|||+++..............||+.|+| ||+..      +.|+|+.|+++ +++. ++.++.+. ...+   
T Consensus       135 ~~~~~kl~DfG~a~~~~~~~~~~~~~~~~t~~y~a-PE~~~~~~~~~ksDiwS~G~~l~el~t~g~~Pf~~~-~~~~~~~  212 (258)
T d1k2pa_         135 DQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSP-PEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERF-TNSETAE  212 (258)
T ss_dssp             TTCCEEECCCSSCCBCSSSSCCCCCCSCCCGGGCC-HHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTS-CHHHHHH
T ss_pred             CCCcEEECcchhheeccCCCceeecccCCCCCcCC-cHHhcCCCCCcceeecccchhhHhHHhcCCCCCCCC-CHHHHHH
Confidence            99999999999998765333333334678999999 77763      78999999987 5654 33333222 2222   


Q ss_pred             --------------HHHHHHHHHhhcccCcCCCCCHHHHHHHHcc
Q 045577          334 --------------LVKCIEVGLLCVQQRIEDWPTMSSVLTMLSN  364 (392)
Q Consensus       334 --------------~~~~~~i~~~Cl~~dp~~RPsm~eVv~~L~~  364 (392)
                                    ...+.+++..||+.||++|||+++|++.|.+
T Consensus       213 ~i~~~~~~~~p~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~d  257 (258)
T d1k2pa_         213 HIAQGLRLYRPHLASEKVYTIMYSCWHEKADERPTFKILLSNILD  257 (258)
T ss_dssp             HHHTTCCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHC
T ss_pred             HHHhCCCCCCcccccHHHHHHHHHHccCCHhHCcCHHHHHHHhhC
Confidence                          2246678889999999999999999999864

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=2.2e-27  Score=219.35  Aligned_cols=176  Identities=19%  Similarity=0.195  Sum_probs=125.1

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEc
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLD  264 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~  264 (392)
                      |++.++..... .++..|+||||++++++............+..++.++.||++||.|||+.   +|+||||||+||+++
T Consensus        67 HpnIv~l~~~~-~~~~~~iv~E~~~~g~l~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~~---~iiHrDlKp~NIll~  142 (273)
T d1mp8a_          67 HPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVS  142 (273)
T ss_dssp             CTTBCCEEEEE-CSSSCEEEEECCTTEEHHHHHHHTTTTSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEE
T ss_pred             CCCEeeEEEEE-ecCeEEEEEEeccCCcHHhhhhccCCCCCHHHHHHHHHHHHHHhhhhccc---Ceeccccchhheeec
Confidence            77777766543 45789999999999998876555555556666899999999999999998   899999999999999


Q ss_pred             CCCCCeEeeeeceEEeCCCCcceeceeeecccccCchhHH------HHHHHhcCCCcc-eeec-ccccCCCCC-------
Q 045577          265 AEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIID-EQTKMKGPF-------  329 (392)
Q Consensus       265 ~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld-~~~~~~~~~-------  329 (392)
                      .++.+||+|||+++.+............||+.|+| ||..      .+.|+||.|+++ +++. +.+++.+..       
T Consensus       143 ~~~~~Kl~DfG~a~~~~~~~~~~~~~~~gt~~y~a-pE~l~~~~~~~~~DiwSlGvil~e~lt~g~~P~~~~~~~~~~~~  221 (273)
T d1mp8a_         143 SNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMA-PESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGR  221 (273)
T ss_dssp             ETTEEEECC-------------------CCGGGCC-HHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHH
T ss_pred             CCCcEEEccchhheeccCCcceeccceecCcccch-hhHhccCCCCCccccccchHHHHHHHhcCCCCCCCCCHHHHHHH
Confidence            99999999999998765444444455678999999 7765      378999999877 4655 433332221       


Q ss_pred             ---------CHHHHHHHHHHHHhhcccCcCCCCCHHHHHHHHccC
Q 045577          330 ---------SADELVKCIEVGLLCVQQRIEDWPTMSSVLTMLSNE  365 (392)
Q Consensus       330 ---------~~~~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~L~~~  365 (392)
                               +......+.+++..||+.||++|||+.+|++.|+..
T Consensus       222 i~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~ei~~~L~~i  266 (273)
T d1mp8a_         222 IENGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTI  266 (273)
T ss_dssp             HHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             HHcCCCCCCCCCCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHH
Confidence                     112223567788899999999999999999998754

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=1.8e-27  Score=221.59  Aligned_cols=170  Identities=17%  Similarity=0.227  Sum_probs=128.0

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEc
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLD  264 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~  264 (392)
                      |+++++.......++..|+||||+++|++......... ..+..+..++.|++.||.|||+.   +|+||||||+||+++
T Consensus        67 HpnIv~l~~~~~~~~~~~ivmEy~~gg~L~~~~~~~~~-l~e~~~~~~~~qi~~al~ylH~~---~iiHrDiKp~NIll~  142 (288)
T d1uu3a_          67 HPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS-FDETCTRFYTAEIVSALEYLHGK---GIIHRDLKPENILLN  142 (288)
T ss_dssp             STTBCCEEEEEECSSEEEEEECCCTTEEHHHHHHHHSS-CCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEC
T ss_pred             CCCeeEEEEEEEECCEEEEEEEccCCCCHHHhhhccCC-CCHHHHHHHHHHHHHHHHhhccc---cEEcCcCCccccccC
Confidence            77777766655556779999999999999776554443 34455788999999999999998   899999999999999


Q ss_pred             CCCCCeEeeeeceEEeCCC-CcceeceeeecccccCchhHH------HHHHHhcCCCcc-eeecccccCCCCCCH-----
Q 045577          265 AEINPNISDFGPARIFGDQ-TEEVTGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIIDEQTKMKGPFSA-----  331 (392)
Q Consensus       265 ~~~~~kl~DFGla~~~~~~-~~~~~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld~~~~~~~~~~~-----  331 (392)
                      .++.+||+|||+|+.+... .........||+.||| ||+.      .+.|+||.|+++ +++.+..++.+....     
T Consensus       143 ~~~~vkl~DFG~a~~~~~~~~~~~~~~~~GT~~Y~A-PE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~~~~~~  221 (288)
T d1uu3a_         143 EDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVS-PELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQK  221 (288)
T ss_dssp             TTSCEEECCCTTCEECC----------CCCCGGGCC-HHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHH
T ss_pred             CCceEEecccccceecccCCcccccccccCCccccC-ceeeccCCCCcccceehhhHHHHHHhhCCCCCCCcCHHHHHHH
Confidence            9999999999999987622 2333344679999999 7766      478999999987 555554444332211     


Q ss_pred             ----------HHHHHHHHHHHhhcccCcCCCCCHHHHH
Q 045577          332 ----------DELVKCIEVGLLCVQQRIEDWPTMSSVL  359 (392)
Q Consensus       332 ----------~~~~~~~~i~~~Cl~~dp~~RPsm~eVv  359 (392)
                                .....+.+++..|++.||++|||++|+.
T Consensus       222 i~~~~~~~p~~~s~~~~~li~~~L~~dP~~R~t~~e~~  259 (288)
T d1uu3a_         222 IIKLEYDFPEKFFPKARDLVEKLLVLDATKRLGCEEME  259 (288)
T ss_dssp             HHTTCCCCCTTCCHHHHHHHHTTSCSSGGGSTTSGGGT
T ss_pred             HHcCCCCCCccCCHHHHHHHHHHccCCHhHCcCHHHHc
Confidence                      1123556688899999999999999864

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=1.2e-27  Score=226.34  Aligned_cols=169  Identities=20%  Similarity=0.287  Sum_probs=129.2

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEc
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLD  264 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~  264 (392)
                      |++.++.....-..+..|+||||++++++.....+.. ...+..+..++.|++.||.|||+++  +|+||||||+|||++
T Consensus        63 HpnIv~l~~~~~~~~~~~iVmEy~~gg~L~~~l~~~~-~l~~~~~~~~~~qil~aL~yLH~~~--~IiHRDiKP~NILl~  139 (322)
T d1s9ja_          63 SPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAG-RIPEQILGKVSIAVIKGLTYLREKH--KIMHRDVKPSNILVN  139 (322)
T ss_dssp             CTTBCCEEEEEECSSEEEEEEECCTTEEHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHHH--CCCCSCCSGGGEEEC
T ss_pred             CCCCCcEEEEEEECCEEEEEEEcCCCCcHHHHHhhcC-CCCHHHHHHHHHHHHHHHHHHHHhC--CEEccccCHHHeeEC
Confidence            7777777666555678999999999999987665543 3455558899999999999999632  799999999999999


Q ss_pred             CCCCCeEeeeeceEEeCCCCcceeceeeecccccCchhHHH------HHHHhcCCCcc-eeecccccCCCCCCHH-----
Q 045577          265 AEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELLQ------AWKLWSEGDPM-EIIDEQTKMKGPFSAD-----  332 (392)
Q Consensus       265 ~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~~------~~diws~G~v~-~~ld~~~~~~~~~~~~-----  332 (392)
                      .++.+||+|||+|+....   ......+||+.||| ||+..      +.|+||.|+++ +++.++.++.+....+     
T Consensus       140 ~~~~vkl~DFGla~~~~~---~~~~~~~GT~~Y~A-PEvl~~~~y~~~~DiWSlGvil~ell~G~~Pf~~~~~~~~~~~~  215 (322)
T d1s9ja_         140 SRGEIKLCDFGVSGQLID---SMANSFVGTRSYMS-PERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMF  215 (322)
T ss_dssp             TTCCEEECCCCCCHHHHH---HTC---CCSSCCCC-HHHHHCSCCCTTHHHHHHHHHHHHHHHSSCCSSCCCTTHHHHHC
T ss_pred             CCCCEEEeeCCCccccCC---CccccccCCccccC-chHHcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH
Confidence            999999999999986532   12234689999999 87764      78999999987 5666654443321100     


Q ss_pred             ------------------------------------------------------HHHHHHHHHHhhcccCcCCCCCHHHH
Q 045577          333 ------------------------------------------------------ELVKCIEVGLLCVQQRIEDWPTMSSV  358 (392)
Q Consensus       333 ------------------------------------------------------~~~~~~~i~~~Cl~~dp~~RPsm~eV  358 (392)
                                                                            ....+.+++..|++.||++|||++|+
T Consensus       216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~ta~e~  295 (322)
T d1s9ja_         216 GCQVEGDAAETPPRPRTPGRPLSSYGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQL  295 (322)
T ss_dssp             ------------------------------CCCCHHHHHHHHHTSCCCCCCBTTBCHHHHHHHHHHTCSSTTTSCCHHHH
T ss_pred             HHHhcCCcccCCcccccccccccccccccccchhHHHHHhhhhccCCccCccccCCHHHHHHHHHHcCCChhHCcCHHHH
Confidence                                                                  01246678889999999999999999


Q ss_pred             HH
Q 045577          359 LT  360 (392)
Q Consensus       359 v~  360 (392)
                      ++
T Consensus       296 L~  297 (322)
T d1s9ja_         296 MV  297 (322)
T ss_dssp             HT
T ss_pred             hh
Confidence            86

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=2.8e-27  Score=218.26  Aligned_cols=170  Identities=19%  Similarity=0.246  Sum_probs=126.4

Q ss_pred             CCCccccccCcC----CCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccce
Q 045577          185 SGGCKRNWEADC----GDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSN  260 (392)
Q Consensus       185 s~GCvR~~~l~C----~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~N  260 (392)
                      |+++++......    .+...|+||||++++++.....+.. ...+..+..++.||++||.|||++. .+|+||||||+|
T Consensus        67 HpnIv~~~~~~~~~~~~~~~~~ivmE~~~~g~L~~~l~~~~-~~~~~~~~~~~~qi~~gl~yLH~~~-~~IiHrDiKp~N  144 (270)
T d1t4ha_          67 HPNIVRFYDSWESTVKGKKCIVLVTELMTSGTLKTYLKRFK-VMKIKVLRSWCRQILKGLQFLHTRT-PPIIHRDLKCDN  144 (270)
T ss_dssp             CTTBCCEEEEEEEESSSCEEEEEEEECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHTSS-SCCCCSCCCGGG
T ss_pred             CCCeeeEEEEEeeccccCCEEEEEEeCCCCCcHHHHHhccc-cccHHHHHHHHHHHHHHHHHHHHCC-CCEEeCCcChhh
Confidence            667776654421    1245799999999999987665443 3345557889999999999999971 139999999999


Q ss_pred             eEEc-CCCCCeEeeeeceEEeCCCCcceeceeeecccccCchhHH-----HHHHHhcCCCcc-eeecccccCCCCCCHHH
Q 045577          261 VLLD-AEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELL-----QAWKLWSEGDPM-EIIDEQTKMKGPFSADE  333 (392)
Q Consensus       261 Ill~-~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~-----~~~diws~G~v~-~~ld~~~~~~~~~~~~~  333 (392)
                      ||++ .++.+||+|||+++....   .......||+.||| ||+.     .+.|+||.|+++ +++.++.++.+..+..+
T Consensus       145 ILl~~~~~~~Kl~DFGla~~~~~---~~~~~~~GT~~Y~a-PE~~~~~~~~~~DIwSlGvilyel~~g~~Pf~~~~~~~~  220 (270)
T d1t4ha_         145 IFITGPTGSVKIGDLGLATLKRA---SFAKAVIGTPEFMA-PEMYEEKYDESVDVYAFGMCMLEMATSEYPYSECQNAAQ  220 (270)
T ss_dssp             EEESSTTSCEEECCTTGGGGCCT---TSBEESCSSCCCCC-GGGGGTCCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHH
T ss_pred             ceeeCCCCCEEEeecCcceeccC---CccCCcccCccccC-HHHhCCCCCCcCchhhHHHHHHHHHHCCCCCCCcccHHH
Confidence            9996 578999999999975332   22334689999999 6665     378999999977 56666555443332222


Q ss_pred             ------------------HHHHHHHHHhhcccCcCCCCCHHHHHH
Q 045577          334 ------------------LVKCIEVGLLCVQQRIEDWPTMSSVLT  360 (392)
Q Consensus       334 ------------------~~~~~~i~~~Cl~~dp~~RPsm~eVv~  360 (392)
                                        ...+.+++.+|++.||++|||+.|+++
T Consensus       221 ~~~~i~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~ell~  265 (270)
T d1t4ha_         221 IYRRVTSGVKPASFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLN  265 (270)
T ss_dssp             HHHHHTTTCCCGGGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             HHHHHHcCCCCcccCccCCHHHHHHHHHHccCCHhHCcCHHHHhC
Confidence                              224667888999999999999999875

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=2.4e-27  Score=218.64  Aligned_cols=174  Identities=18%  Similarity=0.230  Sum_probs=116.0

Q ss_pred             CCCccccccCc--CCCCCeeEEecCccCCCcChhhhhh---hccccchhhhhHHHHHHHhhhhcCcCC--CCceeecccc
Q 045577          185 SGGCKRNWEAD--CGDGEVFLMFEGIKLPDKSEFTCEF---ECSKYSSYVTNILYGIARVILYLPEDS--RLEIIHRDHK  257 (392)
Q Consensus       185 s~GCvR~~~l~--C~~~~~~lv~e~~~~~~l~~~~~~~---~~~~~~~~~~~i~~~ia~gL~yLH~~~--~~~iiHrDlK  257 (392)
                      |++.++.....  ..++..|++|||+++|++.....+.   .....+..+..++.|++.||.|||+..  ..+|+|||||
T Consensus        62 HpnIv~~~~~~~~~~~~~~~ivmEy~~~g~L~~~i~~~~~~~~~l~e~~~~~i~~qi~~al~ylH~~~~~~~~IiHrDiK  141 (269)
T d2java1          62 HPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLK  141 (269)
T ss_dssp             CTTBCCEEEEEEC----CEEEEEECCTTEEHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHHCC---------CC
T ss_pred             CCCEeeEEEEEEeCCCCEEEEEEecCCCCcHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCEEeCcCc
Confidence            66666665543  2245689999999999998755432   223456668999999999999999852  1259999999


Q ss_pred             cceeEEcCCCCCeEeeeeceEEeCCCCcceeceeeecccccCchhHH------HHHHHhcCCCcc-eeecccccCCCCCC
Q 045577          258 TSNVLLDAEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIIDEQTKMKGPFS  330 (392)
Q Consensus       258 p~NIll~~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld~~~~~~~~~~  330 (392)
                      |+|||++.++.+||+|||+++.+.... .......||+.||| ||+.      .+.|+||.|+++ +++.++.++.+...
T Consensus       142 p~NIll~~~~~vkl~DFG~a~~~~~~~-~~~~~~~gt~~Y~A-PE~l~~~~~~~~~DIwSlGvilyel~tg~~Pf~~~~~  219 (269)
T d2java1         142 PANVFLDGKQNVKLGDFGLARILNHDT-SFAKAFVGTPYYMS-PEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQ  219 (269)
T ss_dssp             GGGEEECTTSCEEECCHHHHHHC------------CCCSCCC-HHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSH
T ss_pred             hhhcCcCCCCcEEEeeccceeecccCC-CccccCCCCcccCC-HHHHcCCCCChHHHHHhhCHHHHHHhhCCCCCCCCCH
Confidence            999999999999999999998764322 22334789999999 7765      488999999977 45555433332211


Q ss_pred             ----------------HHHHHHHHHHHHhhcccCcCCCCCHHHHHH
Q 045577          331 ----------------ADELVKCIEVGLLCVQQRIEDWPTMSSVLT  360 (392)
Q Consensus       331 ----------------~~~~~~~~~i~~~Cl~~dp~~RPsm~eVv~  360 (392)
                                      ......+.+++.+|++.||++|||+.|+++
T Consensus       220 ~~~~~~i~~~~~~~~~~~~s~~l~~li~~~L~~dp~~Rps~~ell~  265 (269)
T d2java1         220 KELAGKIREGKFRRIPYRYSDELNEIITRMLNLKDYHRPSVEEILE  265 (269)
T ss_dssp             HHHHHHHHHTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             HHHHHHHHcCCCCCCCcccCHHHHHHHHHHcCCChhHCcCHHHHHh
Confidence                            111224567788999999999999999874

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

Probab=99.93  E-value=1.9e-26  Score=220.32  Aligned_cols=171  Identities=13%  Similarity=0.133  Sum_probs=134.2

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEc
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLD  264 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~  264 (392)
                      |+++++.......++..|+||||+++|++.....+......+..+..|+.||+.||.|||++   +|+||||||+|||++
T Consensus        82 HpnIv~~~~~~~~~~~~~ivmE~~~gg~L~~~l~~~~~~l~e~~~~~i~~qi~~aL~ylH~~---~iiHrDiKp~NIll~  158 (350)
T d1koaa2          82 HPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHEN---NYVHLDLKPENIMFT  158 (350)
T ss_dssp             CTTBCCEEEEEEETTEEEEEECCCCSCBHHHHHTCTTSCBCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEES
T ss_pred             CCCCCcEEEEEEECCEEEEEEEcCCCCCHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhc---CCeeeeechhHeeec
Confidence            77777777665556789999999999999876654444456666899999999999999998   899999999999995


Q ss_pred             --CCCCCeEeeeeceEEeCCCCcceeceeeecccccCchhHH------HHHHHhcCCCcc-eeecccccCCCCCCHHH--
Q 045577          265 --AEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIIDEQTKMKGPFSADE--  333 (392)
Q Consensus       265 --~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld~~~~~~~~~~~~~--  333 (392)
                        .++.+||+|||+++.+....  ......||+.||| ||+.      .+.|+|+.|+++ +++.+..++.+....+.  
T Consensus       159 ~~~~~~vkL~DFG~a~~~~~~~--~~~~~~gT~~Y~a-PEv~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~  235 (350)
T d1koaa2         159 TKRSNELKLIDFGLTAHLDPKQ--SVKVTTGTAEFAA-PEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLR  235 (350)
T ss_dssp             STTSCCEEECCCTTCEECCTTS--CEEEECSCTTTCC-HHHHHTCCBCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHH
T ss_pred             cCCCCeEEEeecchheeccccc--ccceecCcccccC-HHHHcCCCCChhHhhhhhhHHHHHHHhCCCCCCCCCHHHHHH
Confidence              45789999999999875332  2334689999999 7766      378999999987 56666555543322221  


Q ss_pred             -----------------HHHHHHHHHhhcccCcCCCCCHHHHHHH
Q 045577          334 -----------------LVKCIEVGLLCVQQRIEDWPTMSSVLTM  361 (392)
Q Consensus       334 -----------------~~~~~~i~~~Cl~~dp~~RPsm~eVv~~  361 (392)
                                       ...+.+++.+|++.||++|||+.|+++.
T Consensus       236 ~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~eil~h  280 (350)
T d1koaa2         236 NVKSCDWNMDDSAFSGISEDGKDFIRKLLLADPNTRMTIHQALEH  280 (350)
T ss_dssp             HHHHTCCCSCCGGGGGCCHHHHHHHHHHCCSSGGGSCCHHHHHHS
T ss_pred             HHHhCCCCCCcccccCCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence                             1245667889999999999999999874

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=8.7e-27  Score=218.09  Aligned_cols=175  Identities=21%  Similarity=0.218  Sum_probs=133.0

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEc
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLD  264 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~  264 (392)
                      |+++++.......++..|+||||+.++++........ ...+..+..++.||+.||.|||++   +|+||||||+|||++
T Consensus        59 hpnIv~~~~~~~~~~~~~ivmE~~~~~~~~~~~~~~~-~l~~~~~~~~~~qil~aL~~lH~~---~iiHrDiKp~NIli~  134 (299)
T d1ua2a_          59 HPNIIGLLDAFGHKSNISLVFDFMETDLEVIIKDNSL-VLTPSHIKAYMLMTLQGLEYLHQH---WILHRDLKPNNLLLD  134 (299)
T ss_dssp             CTTBCCEEEEECCTTCCEEEEECCSEEHHHHHTTCCS-SCCSSHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEC
T ss_pred             CCCEeEEEeeeccCCceeehhhhhcchHHhhhhhccc-CCCHHHHHHHHHHHHHHHHHhhcc---ceecccCCcceEEec
Confidence            7888888777666788999999999877655443332 334555889999999999999998   899999999999999


Q ss_pred             CCCCCeEeeeeceEEeCCCCcceeceeeecccccCchhHH-------HHHHHhcCCCcc-eeecccccCCCCCCHHHH--
Q 045577          265 AEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELL-------QAWKLWSEGDPM-EIIDEQTKMKGPFSADEL--  334 (392)
Q Consensus       265 ~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~-------~~~diws~G~v~-~~ld~~~~~~~~~~~~~~--  334 (392)
                      .++.+||+|||+++...... .......||+.|+| ||+.       .+.|+||.|+++ +++.+.+.+.+..+.+.+  
T Consensus       135 ~~~~~KL~DFG~a~~~~~~~-~~~~~~~gt~~y~a-PE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~l~~  212 (299)
T d1ua2a_         135 ENGVLKLADFGLAKSFGSPN-RAYTHQVVTRWYRA-PELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTR  212 (299)
T ss_dssp             TTCCEEECCCGGGSTTTSCC-CCCCCSCCCCTTCC-HHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHH
T ss_pred             CCCccccccCccccccCCCc-ccccceecChhhcc-HHHHccCCCCChhhhhhhcchHHHHHHhCcCCCCCCCHHHHHHH
Confidence            99999999999997654322 22233579999999 6654       478999999987 566665444433222221  


Q ss_pred             -----------------------------------------HHHHHHHHhhcccCcCCCCCHHHHHHH--HccC
Q 045577          335 -----------------------------------------VKCIEVGLLCVQQRIEDWPTMSSVLTM--LSNE  365 (392)
Q Consensus       335 -----------------------------------------~~~~~i~~~Cl~~dp~~RPsm~eVv~~--L~~~  365 (392)
                                                               ..+.+++..|++.||++|||++|+++.  |.+.
T Consensus       213 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~dP~~R~sa~e~L~Hp~f~~~  286 (299)
T d1ua2a_         213 IFETLGTPTEEQWPDMCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKMKYFSNR  286 (299)
T ss_dssp             HHHHHCCCCTTTSSSTTSSTTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTSGGGTSS
T ss_pred             HHHhcCCCChhhccchhccchhhhhccCCCCChHHhcccCCHHHHHHHHHHccCChhhCcCHHHHhCCHhhCCC
Confidence                                                     245667889999999999999999873  6543

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

Probab=99.92  E-value=1.9e-26  Score=220.50  Aligned_cols=171  Identities=15%  Similarity=0.127  Sum_probs=133.6

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEc
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLD  264 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~  264 (392)
                      |+++++.......++..|+||||+++++|.....+......+..+..|+.||+.||.|||++   +|+||||||+|||++
T Consensus        85 HpnIv~~~~~~~~~~~~~ivmE~~~gg~L~~~~~~~~~~l~e~~~~~i~~qi~~aL~ylH~~---~iiHRDiKp~NILl~  161 (352)
T d1koba_          85 HPKLINLHDAFEDKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEH---SIVHLDIKPENIMCE  161 (352)
T ss_dssp             STTBCCEEEEEECSSEEEEEEECCCCCBHHHHTTCTTCCBCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEES
T ss_pred             CCCCCcEEEEEEECCEEEEEEEcCCCChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---Ceeeccccccccccc
Confidence            77888877766667789999999999999765444444456666899999999999999998   999999999999997


Q ss_pred             --CCCCCeEeeeeceEEeCCCCcceeceeeecccccCchhHH------HHHHHhcCCCcc-eeecccccCCCCCCHH---
Q 045577          265 --AEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIIDEQTKMKGPFSAD---  332 (392)
Q Consensus       265 --~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld~~~~~~~~~~~~---  332 (392)
                        .++.+||+|||+|+.+....  ......||+.||| ||+.      .+.|+|+.|+++ +++.+.+++.+....+   
T Consensus       162 ~~~~~~vkL~DFGla~~~~~~~--~~~~~~gt~~y~a-PE~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~  238 (352)
T d1koba_         162 TKKASSVKIIDFGLATKLNPDE--IVKVTTATAEFAA-PEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQ  238 (352)
T ss_dssp             STTCCCEEECCCTTCEECCTTS--CEEEECSSGGGCC-HHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHH
T ss_pred             ccCCCeEEEeecccceecCCCC--ceeeccCcccccC-HHHHcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHH
Confidence              56889999999999875322  2344679999999 7765      478999999987 5555554443322211   


Q ss_pred             ----------------HHHHHHHHHHhhcccCcCCCCCHHHHHHH
Q 045577          333 ----------------ELVKCIEVGLLCVQQRIEDWPTMSSVLTM  361 (392)
Q Consensus       333 ----------------~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~  361 (392)
                                      ....+.+++..|++.||++|||+.|+++.
T Consensus       239 ~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~s~~eil~H  283 (352)
T d1koba_         239 NVKRCDWEFDEDAFSSVSPEAKDFIKNLLQKEPRKRLTVHDALEH  283 (352)
T ss_dssp             HHHHCCCCCCSSTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred             HHHhCCCCCCcccccCCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence                            12345678889999999999999999874

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.92  E-value=2.3e-26  Score=215.24  Aligned_cols=176  Identities=22%  Similarity=0.213  Sum_probs=134.8

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhcc---------------ccchhhhhHHHHHHHhhhhcCcCCCC
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECS---------------KYSSYVTNILYGIARVILYLPEDSRL  249 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~---------------~~~~~~~~i~~~ia~gL~yLH~~~~~  249 (392)
                      |++.++.....-+++..|++|||+++|++........+.               ..+..++.++.||+.||.|||+.   
T Consensus        78 HpnIv~~~~~~~~~~~~~~v~e~~~~g~l~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~ylH~~---  154 (299)
T d1fgka_          78 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK---  154 (299)
T ss_dssp             CTTBCCEEEEECSSSSCEEEECCCTTCBHHHHHHTTSCC------------CCCCCHHHHHHHHHHHHHHHHHHHHT---
T ss_pred             CCeEEecccccccCCeEEEEEEccCCCcHHHHHHhhcCCccccccccccCccccCCHHHHHHHHHHHHHHHHHhhhC---
Confidence            666666655444457799999999999998866544321               25556899999999999999998   


Q ss_pred             ceeecccccceeEEcCCCCCeEeeeeceEEeCC-CCcceeceeeecccccCchhHH------HHHHHhcCCCcc-eeec-
Q 045577          250 EIIHRDHKTSNVLLDAEINPNISDFGPARIFGD-QTEEVTGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIID-  320 (392)
Q Consensus       250 ~iiHrDlKp~NIll~~~~~~kl~DFGla~~~~~-~~~~~~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld-  320 (392)
                      +|+||||||+|||++.++.+||+|||+++.... ..........|++.|+| ||..      .++|+|++|+++ +++. 
T Consensus       155 ~ivHrDiKp~NiLl~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~a-PE~l~~~~y~~k~DiwS~Gvvl~ell~~  233 (299)
T d1fgka_         155 KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMA-PEALFDRIYTHQSDVWSFGVLLWEIFTL  233 (299)
T ss_dssp             TCCCSCCSGGGEEECTTCCEEECSTTCCCCGGGCCTTCCCTTSCCGGGGSC-HHHHHHCCCCHHHHHHHHHHHHHHHHTT
T ss_pred             CEEeeeecccceeecCCCCeEeccchhhccccccccccccccCCCChhhhh-hhHhcCCCCCchhhhHHhHHHHHHhccC
Confidence            899999999999999999999999999987652 22223344678999999 7765      378999999976 5664 


Q ss_pred             ccccCCCCCCHHH-----------------HHHHHHHHHhhcccCcCCCCCHHHHHHHHccC
Q 045577          321 EQTKMKGPFSADE-----------------LVKCIEVGLLCVQQRIEDWPTMSSVLTMLSNE  365 (392)
Q Consensus       321 ~~~~~~~~~~~~~-----------------~~~~~~i~~~Cl~~dp~~RPsm~eVv~~L~~~  365 (392)
                      +.+.+. ..+.++                 ...+.+++.+|++.||++|||+.||+++|++.
T Consensus       234 g~~p~~-~~~~~~~~~~i~~~~~~~~p~~~~~~l~~li~~cl~~dP~~Rps~~eil~~L~~i  294 (299)
T d1fgka_         234 GGSPYP-GVPVEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI  294 (299)
T ss_dssp             SCCSST-TCCHHHHHHHHHTTCCCCCCSSCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             CCCCCC-CCCHHHHHHHHHcCCCCCCCccchHHHHHHHHHHccCCHhHCcCHHHHHHHHHHH
Confidence            333332 222222                 23566788899999999999999999999865

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.92  E-value=1.4e-26  Score=217.06  Aligned_cols=177  Identities=19%  Similarity=0.208  Sum_probs=129.5

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhc-----------------------cccchhhhhHHHHHHHhhh
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFEC-----------------------SKYSSYVTNILYGIARVIL  241 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~-----------------------~~~~~~~~~i~~~ia~gL~  241 (392)
                      |++.++........+..+++|||++++++.........                       ......++.|+.|++.||.
T Consensus        75 h~niv~~~~~~~~~~~~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~  154 (301)
T d1lufa_          75 NPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMA  154 (301)
T ss_dssp             CTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHH
T ss_pred             CCCcccceeeeccCCceEEEEEecCCCcHHHHHHhcCccccccccccccchhhhccccCCCCCCHHHHHHHHHHHHHHhh
Confidence            55555555544445789999999999998774432211                       1123347889999999999


Q ss_pred             hcCcCCCCceeecccccceeEEcCCCCCeEeeeeceEEeCC-CCcceeceeeecccccCchhHH------HHHHHhcCCC
Q 045577          242 YLPEDSRLEIIHRDHKTSNVLLDAEINPNISDFGPARIFGD-QTEEVTGRVIGTQTLKTVPELL------QAWKLWSEGD  314 (392)
Q Consensus       242 yLH~~~~~~iiHrDlKp~NIll~~~~~~kl~DFGla~~~~~-~~~~~~~~~~gt~~y~a~~~~~------~~~diws~G~  314 (392)
                      |||+.   +|+||||||+|||++.++.+||+|||+++.+.. ..........|++.|+| ||..      .+.|+||+|+
T Consensus       155 ylH~~---~ivHrDlKp~NILld~~~~~Kl~DFGls~~~~~~~~~~~~~~~~~~~~y~a-PE~~~~~~~t~ksDVwS~Gv  230 (301)
T d1lufa_         155 YLSER---KFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMP-PESIFYNRYTTESDVWAYGV  230 (301)
T ss_dssp             HHHHT---TCCCSCCSGGGEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCC-HHHHHHCCCCHHHHHHHHHH
T ss_pred             hcccC---CeEeeEEcccceEECCCCcEEEccchhheeccCCccccccCCCCcCcCcCC-HHHHccCCCChhhhhccchh
Confidence            99998   899999999999999999999999999986642 22223344678899999 6655      3789999999


Q ss_pred             cce-eecccccCCCCCCH-----------------HHHHHHHHHHHhhcccCcCCCCCHHHHHHHHccC
Q 045577          315 PME-IIDEQTKMKGPFSA-----------------DELVKCIEVGLLCVQQRIEDWPTMSSVLTMLSNE  365 (392)
Q Consensus       315 v~~-~ld~~~~~~~~~~~-----------------~~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~L~~~  365 (392)
                      ++. ++.....+....+.                 .....+.+++..||+.+|++||||.||+++|+..
T Consensus       231 vl~ell~~~~~p~~~~~~~e~~~~v~~~~~~~~p~~~~~~~~~li~~cl~~~P~~RPt~~ev~~~L~~i  299 (301)
T d1lufa_         231 VLWEIFSYGLQPYYGMAHEEVIYYVRDGNILACPENCPLELYNLMRLCWSKLPADRPSFCSIHRILQRM  299 (301)
T ss_dssp             HHHHHHTTTCCTTTTSCHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHT
T ss_pred             hHHHHHccCCCCCCCCCHHHHHHHHHcCCCCCCCccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHh
Confidence            873 55542221111111                 2233577889999999999999999999999876

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.92  E-value=3.8e-27  Score=221.55  Aligned_cols=166  Identities=19%  Similarity=0.246  Sum_probs=128.1

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEc
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLD  264 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~  264 (392)
                      |++.++.......++..|+||||+.++++........ ...+..+..++.||+.||.|||++   +|+||||||+|||++
T Consensus        74 HpnIv~~~~~~~~~~~~~iv~E~~~~g~l~~~~~~~~-~l~e~~~~~i~~qi~~aL~yLH~~---~iiHrDiKp~NILl~  149 (309)
T d1u5ra_          74 HPNTIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKK-PLQEVEIAAVTHGALQGLAYLHSH---NMIHRDVKAGNILLS  149 (309)
T ss_dssp             CTTBCCEEEEEEETTEEEEEEECCSEEHHHHHHHHTS-CCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEEE
T ss_pred             CCCEeeEEEEEEECCEEEEEEEecCCCchHHHHHhCC-CCCHHHHHHHHHHHHHHHHHHHhC---CEeccCCCcceEEEC
Confidence            7777777766555678999999999988865444333 335556889999999999999998   899999999999999


Q ss_pred             CCCCCeEeeeeceEEeCCCCcceeceeeecccccCchhHH---------HHHHHhcCCCcc-eeecccccCCCCCCHHH-
Q 045577          265 AEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELL---------QAWKLWSEGDPM-EIIDEQTKMKGPFSADE-  333 (392)
Q Consensus       265 ~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~---------~~~diws~G~v~-~~ld~~~~~~~~~~~~~-  333 (392)
                      .++.+||+|||+++....     .....||+.||| ||+.         .+.|+||.|+++ +++.+..++.+....+. 
T Consensus       150 ~~~~~Kl~DFG~a~~~~~-----~~~~~GT~~Y~A-PE~~~~~~~~~y~~~~DiwSlGvilyel~~g~~Pf~~~~~~~~~  223 (309)
T d1u5ra_         150 EPGLVKLGDFGSASIMAP-----ANSFVGTPYWMA-PEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSAL  223 (309)
T ss_dssp             TTTEEEECCCTTCBSSSS-----BCCCCSCGGGCC-HHHHTTTTSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHH
T ss_pred             CCCCEEEeecccccccCC-----CCccccCccccC-HHHHhccCCCCcCchhhhhhHHHHHHHHHHCCCCCCCCCHHHHH
Confidence            999999999999976432     223579999999 7764         368999999977 55555444333221111 


Q ss_pred             ----------------HHHHHHHHHhhcccCcCCCCCHHHHHH
Q 045577          334 ----------------LVKCIEVGLLCVQQRIEDWPTMSSVLT  360 (392)
Q Consensus       334 ----------------~~~~~~i~~~Cl~~dp~~RPsm~eVv~  360 (392)
                                      ...+.+++..|++.||++|||+.|+++
T Consensus       224 ~~i~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~  266 (309)
T d1u5ra_         224 YHIAQNESPALQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLK  266 (309)
T ss_dssp             HHHHHSCCCCCSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred             HHHHhCCCCCCCCCCCCHHHHHHHHHHCcCChhHCcCHHHHHh
Confidence                            224567888999999999999999976

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.92  E-value=1.4e-26  Score=217.41  Aligned_cols=170  Identities=18%  Similarity=0.178  Sum_probs=121.0

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEc
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLD  264 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~  264 (392)
                      |+++++.......++..|+||||+++++|.....+... ..+..+..++.||+.||.|||+.   +|+||||||+||++.
T Consensus        66 HpnIv~l~~~~~~~~~~~lvmE~~~gg~L~~~l~~~~~-l~e~~~~~~~~qi~~al~ylH~~---~iiHrDiKp~Nil~~  141 (307)
T d1a06a_          66 HPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGF-YTERDASRLIFQVLDAVKYLHDL---GIVHRDLKPENLLYY  141 (307)
T ss_dssp             CTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHTCSC-CCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEES
T ss_pred             CCCCCcEEEEEEECCEEEEEEeccCCCcHHHhhhcccC-CCHHHHHHHHHHHHHHHHhhhhc---eeeeEEecccceeec
Confidence            77888877766666789999999999999887655443 34555889999999999999998   899999999999994


Q ss_pred             ---CCCCCeEeeeeceEEeCCCCcceeceeeecccccCchhHH------HHHHHhcCCCcc-eeecccccCCCCCC----
Q 045577          265 ---AEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIIDEQTKMKGPFS----  330 (392)
Q Consensus       265 ---~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld~~~~~~~~~~----  330 (392)
                         .++.+||+|||+++......  ......||+.||| ||+.      .+.|+||.|+++ +++.+.+++.+...    
T Consensus       142 ~~~~~~~vkl~DFG~a~~~~~~~--~~~~~~GT~~y~A-PE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~~~~  218 (307)
T d1a06a_         142 SLDEDSKIMISDFGLSKMEDPGS--VLSTACGTPGYVA-PEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLF  218 (307)
T ss_dssp             SSSTTCCEEECCC--------------------CTTSC-HHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHH
T ss_pred             ccCCCceEEEeccceeEEccCCC--eeeeeeeCccccC-cHHHcCCCCCcHHHhhhhhHHHHHHHhCCCCCCCCCHHHHH
Confidence               57889999999998754222  2234679999999 7765      488999999977 45555444332211    


Q ss_pred             ---------------HHHHHHHHHHHHhhcccCcCCCCCHHHHHHH
Q 045577          331 ---------------ADELVKCIEVGLLCVQQRIEDWPTMSSVLTM  361 (392)
Q Consensus       331 ---------------~~~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~  361 (392)
                                     .+....+.+++..|++.||++|||+.|+++.
T Consensus       219 ~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~h  264 (307)
T d1a06a_         219 EQILKAEYEFDSPYWDDISDSAKDFIRHLMEKDPEKRFTCEQALQH  264 (307)
T ss_dssp             HHHHTTCCCCCTTTTTTSCHHHHHHHHHHSCSSGGGSCCHHHHHHS
T ss_pred             HHHhccCCCCCCccccCCCHHHHHHHHHHccCCHhHCcCHHHHhcC
Confidence                           1122356678889999999999999999884

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.92  E-value=1.4e-26  Score=218.59  Aligned_cols=176  Identities=19%  Similarity=0.249  Sum_probs=131.6

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEc
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLD  264 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~  264 (392)
                      |++.++.... |.+++.+++||++.++++............+..+++++.|||+||.|||++   +|+||||||+||+++
T Consensus        70 HpnIv~l~g~-~~~~~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~qi~~gl~yLH~~---~iiHrDlKp~NIll~  145 (317)
T d1xkka_          70 NPHVCRLLGI-CLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVK  145 (317)
T ss_dssp             CTTBCCEEEE-EESSSEEEEEECCTTCBHHHHHHHTSSSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEE
T ss_pred             CCCEeeEEEE-EecCCeeEEEEeccCCcccccccccccCCCHHHHHHHHHHHHHHHHHHHHc---CcccCcchhhcceeC
Confidence            7777777655 345778999999999988776555555556666899999999999999998   899999999999999


Q ss_pred             CCCCCeEeeeeceEEeCCC-CcceeceeeecccccCchhHH------HHHHHhcCCCcc-eeec-ccccCCCC-------
Q 045577          265 AEINPNISDFGPARIFGDQ-TEEVTGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIID-EQTKMKGP-------  328 (392)
Q Consensus       265 ~~~~~kl~DFGla~~~~~~-~~~~~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld-~~~~~~~~-------  328 (392)
                      .++.+||+|||+++..... .........||+.||| ||..      .+.|+||.|+++ +++. +.+.+.+.       
T Consensus       146 ~~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~A-PE~l~~~~~~~~sDvwS~Gvil~el~t~g~~p~~~~~~~~~~~  224 (317)
T d1xkka_         146 TPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA-LESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISS  224 (317)
T ss_dssp             ETTEEEECCCSHHHHTTTTCC--------CCTTTSC-HHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCGGGHHH
T ss_pred             CCCCeEeeccccceecccccccccccccccCccccC-hHHHhcCCCChhhhhhhHHHHHHHHHHCCCCCCCCCCHHHHHH
Confidence            9999999999999876532 2223334578999999 7754      478999999987 4554 32222211       


Q ss_pred             ---------CCHHHHHHHHHHHHhhcccCcCCCCCHHHHHHHHccC
Q 045577          329 ---------FSADELVKCIEVGLLCVQQRIEDWPTMSSVLTMLSNE  365 (392)
Q Consensus       329 ---------~~~~~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~L~~~  365 (392)
                               .+......+.+++.+||+.||++|||+.+|++.|+..
T Consensus       225 ~i~~~~~~~~p~~~~~~~~~li~~cl~~dP~~RPs~~eil~~l~~~  270 (317)
T d1xkka_         225 ILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKM  270 (317)
T ss_dssp             HHHHTCCCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             HHHcCCCCCCCcccCHHHHHHHHHhCCCChhhCcCHHHHHHHHHHH
Confidence                     1122233567788899999999999999999987653

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.92  E-value=2.9e-26  Score=215.49  Aligned_cols=177  Identities=18%  Similarity=0.209  Sum_probs=133.0

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhcc---------ccchhhhhHHHHHHHhhhhcCcCCCCceeecc
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECS---------KYSSYVTNILYGIARVILYLPEDSRLEIIHRD  255 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~---------~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrD  255 (392)
                      |++.++.......++..+++|||+.+|++..........         .....+.+++.|+|+||.|||++   +|+|||
T Consensus        82 h~nIv~~~~~~~~~~~~~lv~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~gl~~LH~~---~ivHrD  158 (308)
T d1p4oa_          82 CHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRD  158 (308)
T ss_dssp             CTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSC
T ss_pred             CCCEeeeeeEEecCCceeEEEeecCCCCHHHHHHhcccccccccccCCCCHHHHHHHHHHHHHHHHHHhhC---Ceeece
Confidence            677777766554567899999999999998755433211         13445788999999999999998   899999


Q ss_pred             cccceeEEcCCCCCeEeeeeceEEeCCC-CcceeceeeecccccCchhHH------HHHHHhcCCCcc-eeecccccCCC
Q 045577          256 HKTSNVLLDAEINPNISDFGPARIFGDQ-TEEVTGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIIDEQTKMKG  327 (392)
Q Consensus       256 lKp~NIll~~~~~~kl~DFGla~~~~~~-~~~~~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld~~~~~~~  327 (392)
                      |||+|||++.++.+||+|||+++.+... .........||+.|+| |+..      .+.|+|+.|+++ +++.....+..
T Consensus       159 lk~~NiLld~~~~~Kl~DFGla~~~~~~~~~~~~~~~~~t~~y~a-Pe~l~~~~~~~~~Dv~S~G~il~El~t~~~~p~~  237 (308)
T d1p4oa_         159 LAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMS-PESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQ  237 (308)
T ss_dssp             CSGGGEEECTTCCEEECCTTCCCGGGGGGCEEGGGSSEECGGGCC-HHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTT
T ss_pred             EcCCceeecCCceEEEeecccceeccCCcceeeccceecccccCC-HHHHccCCCCcccccccHHHHHHHHHhCCCCCCC
Confidence            9999999999999999999999866422 2222334578999999 6654      378999999876 45544211111


Q ss_pred             CCCHH-----------------HHHHHHHHHHhhcccCcCCCCCHHHHHHHHccC
Q 045577          328 PFSAD-----------------ELVKCIEVGLLCVQQRIEDWPTMSSVLTMLSNE  365 (392)
Q Consensus       328 ~~~~~-----------------~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~L~~~  365 (392)
                      ..+..                 ....+.+++.+||+.+|++||||++|+++|++.
T Consensus       238 ~~~~~~~~~~i~~~~~~~~p~~~~~~l~~li~~cl~~~P~~RPs~~~il~~L~~~  292 (308)
T d1p4oa_         238 GLSNEQVLRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEE  292 (308)
T ss_dssp             TSCHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGG
T ss_pred             CCCHHHHHHHHHhCCCCCCcccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHh
Confidence            11111                 123567788899999999999999999999876

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.92  E-value=2.7e-26  Score=215.95  Aligned_cols=178  Identities=19%  Similarity=0.188  Sum_probs=134.5

Q ss_pred             CCCccccccCcC-CCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEE
Q 045577          185 SGGCKRNWEADC-GDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLL  263 (392)
Q Consensus       185 s~GCvR~~~l~C-~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll  263 (392)
                      |++.++...... .++..++||||++++++........-......++.++.|++.||.|||+.   +|+||||||+|||+
T Consensus        87 HpnIv~~~g~~~~~~~~~~lv~E~~~~g~l~~~~~~~~~~~~~~~~~~i~~qia~gL~~lH~~---~iiHrDLK~~NILl  163 (311)
T d1r0pa_          87 HPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASK---KFVHRDLAARNCML  163 (311)
T ss_dssp             CTTBCCCCEEEEETTTEEEEEEECCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEE
T ss_pred             CCCEeEEeEEEEecCCceEEEEEEeecCchhhhhccccccchHHHHHHHHHHHHHhhhhhccc---CcccCCccHHhEeE
Confidence            888888776543 24678999999999998875554443344555789999999999999998   89999999999999


Q ss_pred             cCCCCCeEeeeeceEEeCCCC---cceeceeeecccccCchhHHH------HHHHhcCCCcc-eeecccccCCCCC----
Q 045577          264 DAEINPNISDFGPARIFGDQT---EEVTGRVIGTQTLKTVPELLQ------AWKLWSEGDPM-EIIDEQTKMKGPF----  329 (392)
Q Consensus       264 ~~~~~~kl~DFGla~~~~~~~---~~~~~~~~gt~~y~a~~~~~~------~~diws~G~v~-~~ld~~~~~~~~~----  329 (392)
                      ++++.+||+|||+++......   ........||+.|+| ||...      +.|+||+|+++ +++..+.++....    
T Consensus       164 ~~~~~~kL~DFG~~~~~~~~~~~~~~~~~~~~gt~~y~a-PE~~~~~~~~~ksDI~SfGivl~El~t~~~p~~~~~~~~~  242 (311)
T d1r0pa_         164 DEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMA-LESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFD  242 (311)
T ss_dssp             CTTCCEEECSSGGGCCTTTTTCCCTTCTTCSSCCGGGSC-HHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCC------
T ss_pred             CCCCCEEEecccchhhccccccccceecccccccccccC-hHHHhcCCCCChhHhhhhHHHHHHHHHCCCCCCCCCCHHH
Confidence            999999999999998765221   122233578999999 66653      78999999877 4554322222111    


Q ss_pred             -------------CHHHHHHHHHHHHhhcccCcCCCCCHHHHHHHHccCC
Q 045577          330 -------------SADELVKCIEVGLLCVQQRIEDWPTMSSVLTMLSNES  366 (392)
Q Consensus       330 -------------~~~~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~L~~~~  366 (392)
                                   +......+.+++.+||+.||++||+|.||++.|++..
T Consensus       243 ~~~~i~~g~~~~~p~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~L~~i~  292 (311)
T d1r0pa_         243 ITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIF  292 (311)
T ss_dssp             CHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             HHHHHHcCCCCCCcccCcHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHH
Confidence                         1112235778888999999999999999999998763

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.92  E-value=4.6e-26  Score=210.44  Aligned_cols=176  Identities=20%  Similarity=0.185  Sum_probs=131.1

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEc
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLD  264 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~  264 (392)
                      |++.++..... .++..+++|||++++++...............++.++.|||.||.|||++   +|+||||||+||+++
T Consensus        70 H~nIv~~~g~~-~~~~~~lv~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~~---~iiHrDikp~NIll~  145 (273)
T d1u46a_          70 HRNLIRLYGVV-LTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESK---RFIHRDLAARNLLLA  145 (273)
T ss_dssp             CTTBCCEEEEE-CSSSCEEEEECCTTCBHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEEE
T ss_pred             CCCEEEEEEEE-eecchheeeeeecCcchhhhhhcccCCCCHHHHHHHHHHHHHHHHHhhhC---CEeeeeecHHHhccc
Confidence            66666655433 35678999999999998775555555456666899999999999999998   899999999999999


Q ss_pred             CCCCCeEeeeeceEEeCCCCc--ceeceeeecccccCchhHHH------HHHHhcCCCcc-eeec-ccccCCCCC-----
Q 045577          265 AEINPNISDFGPARIFGDQTE--EVTGRVIGTQTLKTVPELLQ------AWKLWSEGDPM-EIID-EQTKMKGPF-----  329 (392)
Q Consensus       265 ~~~~~kl~DFGla~~~~~~~~--~~~~~~~gt~~y~a~~~~~~------~~diws~G~v~-~~ld-~~~~~~~~~-----  329 (392)
                      .++.+||+|||+++.......  .......|+..|+| ||...      ..|+|+.|+++ +++. +..++.+..     
T Consensus       146 ~~~~vkl~DfGl~~~~~~~~~~~~~~~~~~~~~~~~a-PE~~~~~~~~~~~Di~S~Gvil~emlt~G~~Pf~~~~~~~~~  224 (273)
T d1u46a_         146 TRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCA-PESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQIL  224 (273)
T ss_dssp             ETTEEEECCCTTCEECCC-CCEEEC-----CCGGGCC-HHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHH
T ss_pred             cccceeeccchhhhhcccCCCcceecCccccCcccCC-HHHHhCCCCCcchhhhhhHHHHHHHHhCCCCCCCCcCHHHHH
Confidence            999999999999998753222  22233567889999 77653      78999999877 5664 443332211     


Q ss_pred             ------------CHHHHHHHHHHHHhhcccCcCCCCCHHHHHHHHccC
Q 045577          330 ------------SADELVKCIEVGLLCVQQRIEDWPTMSSVLTMLSNE  365 (392)
Q Consensus       330 ------------~~~~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~L~~~  365 (392)
                                  +......+.+++..||+.||++||||.+|++.|+..
T Consensus       225 ~~i~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~ei~~~L~~~  272 (273)
T d1u46a_         225 HKIDKEGERLPRPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEA  272 (273)
T ss_dssp             HHHHTSCCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             HHHHhCCCCCCCcccccHHHHHHHHHHcCCChhHCcCHHHHHHHHHhc
Confidence                        111223566788899999999999999999999753

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.92  E-value=3.3e-26  Score=215.38  Aligned_cols=177  Identities=19%  Similarity=0.208  Sum_probs=135.3

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhcc-----------------ccchhhhhHHHHHHHhhhhcCcCC
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECS-----------------KYSSYVTNILYGIARVILYLPEDS  247 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~-----------------~~~~~~~~i~~~ia~gL~yLH~~~  247 (392)
                      |++.++...........+++|||++++++.....+..+.                 ..+..++.++.||++||.|||++ 
T Consensus        86 HpnIv~~~g~~~~~~~~~lvmE~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~~LH~~-  164 (311)
T d1t46a_          86 HMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASK-  164 (311)
T ss_dssp             CTTBCCEEEEECSSSSCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHT-
T ss_pred             CCCEEEEEEEEeeCCEEEEEEEcCCCCCHHHHHHhccccccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhC-
Confidence            677777666655567799999999999988765544321                 23445789999999999999998 


Q ss_pred             CCceeecccccceeEEcCCCCCeEeeeeceEEeCCC-CcceeceeeecccccCchhHH------HHHHHhcCCCcc-eee
Q 045577          248 RLEIIHRDHKTSNVLLDAEINPNISDFGPARIFGDQ-TEEVTGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EII  319 (392)
Q Consensus       248 ~~~iiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~-~~~~~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~l  319 (392)
                        +++||||||+||+++.++.+|++|||+++..... .........||+.|+| ||..      ...|+|++|+++ +++
T Consensus       165 --~ivHrDLKp~NIl~~~~~~~ki~DfG~~~~~~~~~~~~~~~~~~gt~~y~a-PE~~~~~~~~~~~DIwS~G~~l~ell  241 (311)
T d1t46a_         165 --NCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMA-PESIFNCVYTFESDVWSYGIFLWELF  241 (311)
T ss_dssp             --TCCCSCCSGGGEEEETTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCC-HHHHHHCCCCHHHHHHHHHHHHHHHH
T ss_pred             --CeeecccccccccccccCcccccccchheeccCCCcceEeeecccChHHcC-HHHhcCCCCCCcccccchHHHHHHHH
Confidence              8999999999999999999999999999876532 2233344689999999 7755      378999999977 455


Q ss_pred             c-ccccCCCCCCHHH-----------------HHHHHHHHHhhcccCcCCCCCHHHHHHHHccC
Q 045577          320 D-EQTKMKGPFSADE-----------------LVKCIEVGLLCVQQRIEDWPTMSSVLTMLSNE  365 (392)
Q Consensus       320 d-~~~~~~~~~~~~~-----------------~~~~~~i~~~Cl~~dp~~RPsm~eVv~~L~~~  365 (392)
                      . +.+.+......++                 ...+.+++.+||+.||++||||.+|+++|++.
T Consensus       242 t~g~p~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~~il~~L~~~  305 (311)
T d1t46a_         242 SLGSSPYPGMPVDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQ  305 (311)
T ss_dssp             TTTCCSSTTCCSSHHHHHHHHHTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             hCCCCCCCCCCHHHHHHHHHhcCCCCCCcccccHHHHHHHHHHcCCChhHCcCHHHHHHHHHHh
Confidence            4 3222222222122                 23566788999999999999999999999863

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=99.91  E-value=8.1e-26  Score=209.17  Aligned_cols=169  Identities=20%  Similarity=0.215  Sum_probs=131.2

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEc
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLD  264 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~  264 (392)
                      |+++++.....-+++..|+||||++++++......... ..+..+..++.||+.||.|||++   +|+||||||+||+++
T Consensus        69 hpnIv~~~~~~~~~~~~~ivmE~~~~g~L~~~l~~~~~-l~e~~~~~~~~qi~~al~~lH~~---~ivHrDlkp~Nill~  144 (277)
T d1phka_          69 HPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVT-LSEKETRKIMRALLEVICALHKL---NIVHRDLKPENILLD  144 (277)
T ss_dssp             CTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHHHSS-CCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEC
T ss_pred             CCCeEEEEeecccCcceEEEEEcCCCchHHHHHHhcCC-CCHHHHHHHHHHHHHHHHHHHHc---CCcccccccceEEEc
Confidence            55666665555456788999999999999887655443 45666899999999999999998   899999999999999


Q ss_pred             CCCCCeEeeeeceEEeCCCCcceeceeeecccccCchhHHH------------HHHHhcCCCcc-eeecccccCCCCCCH
Q 045577          265 AEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELLQ------------AWKLWSEGDPM-EIIDEQTKMKGPFSA  331 (392)
Q Consensus       265 ~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~~------------~~diws~G~v~-~~ld~~~~~~~~~~~  331 (392)
                      .++.+||+|||+++......  ......||+.|++ ||+..            +.|+|+.|+++ +++.++.++.+....
T Consensus       145 ~~~~~kl~DFG~a~~~~~~~--~~~~~~gt~~y~~-PE~~~~~~~~~~~~~~~~~DiwslGvilyeml~g~~Pf~~~~~~  221 (277)
T d1phka_         145 DDMNIKLTDFGFSCQLDPGE--KLREVCGTPSYLA-PEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQM  221 (277)
T ss_dssp             TTCCEEECCCTTCEECCTTC--CBCCCCSCGGGCC-HHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH
T ss_pred             CCCCeEEccchheeEccCCC--ceeeeeccCCCCC-HHHhhccccccCCCCCchheEcccchhhhhhccCCCCCCCCCHH
Confidence            99999999999999875322  2233679999999 77654            57999999987 566555444333221


Q ss_pred             H-------------------HHHHHHHHHHhhcccCcCCCCCHHHHHH
Q 045577          332 D-------------------ELVKCIEVGLLCVQQRIEDWPTMSSVLT  360 (392)
Q Consensus       332 ~-------------------~~~~~~~i~~~Cl~~dp~~RPsm~eVv~  360 (392)
                      +                   ....+.+++.+|++.||++||++.||++
T Consensus       222 ~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~~p~~R~s~~eil~  269 (277)
T d1phka_         222 LMLRMIMSGNYQFGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALA  269 (277)
T ss_dssp             HHHHHHHHTCCCCCTTTGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTT
T ss_pred             HHHHHHHhCCCCCCCcccccCCHHHHHHHHHHccCChhHCcCHHHHHc
Confidence            1                   2235667888999999999999999865

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.91  E-value=7e-26  Score=217.57  Aligned_cols=168  Identities=15%  Similarity=0.063  Sum_probs=128.8

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEc
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLD  264 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~  264 (392)
                      |++.++........+..|+||||++++++.....+.. ...+..+..++.||+.||.|||++   +|+||||||+|||++
T Consensus        66 hpnIv~l~~~~~~~~~~~ivmE~~~gg~L~~~l~~~~-~~~e~~~~~~~~qi~~aL~ylH~~---~iiHrDlKP~NILl~  141 (364)
T d1omwa3          66 CPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHG-VFSEADMRFYAAEIILGLEHMHNR---FVVYRDLKPANILLD  141 (364)
T ss_dssp             CTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEC
T ss_pred             CCcEEEEEEEEEECCEEEEEEEecCCCcHHHHHHhcc-cccHHHHHHHHHHHHHHHHHHHHC---CccceeeccceeEEc
Confidence            6666666655555677999999999999987665443 334555788999999999999998   899999999999999


Q ss_pred             CCCCCeEeeeeceEEeCCCCcceeceeeecccccCchhHH-------HHHHHhcCCCcc-eeecccccCCCCCC------
Q 045577          265 AEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELL-------QAWKLWSEGDPM-EIIDEQTKMKGPFS------  330 (392)
Q Consensus       265 ~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~-------~~~diws~G~v~-~~ld~~~~~~~~~~------  330 (392)
                      .++.+||+|||+|+.+...   ......||+.||| ||+.       .+.|+||.|+++ +++.++.++.+...      
T Consensus       142 ~~g~iKl~DFGla~~~~~~---~~~~~~GT~~y~A-PE~~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~  217 (364)
T d1omwa3         142 EHGHVRISDLGLACDFSKK---KPHASVGTHGYMA-PEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEI  217 (364)
T ss_dssp             SSSCEEECCCTTCEECSSS---CCCSCCSCGGGCC-HHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCSSCSSCSSCHHHH
T ss_pred             CCCcEEEeeeceeeecCCC---cccccccccccch-hHHhhcCCCCCcccchhHHHHHHHHHHhCCCCCCCCCHHHHHHH
Confidence            9999999999999987532   2234579999999 7655       378999999987 55555544432211      


Q ss_pred             ------------HHHHHHHHHHHHhhcccCcCCCCC-----HHHHHH
Q 045577          331 ------------ADELVKCIEVGLLCVQQRIEDWPT-----MSSVLT  360 (392)
Q Consensus       331 ------------~~~~~~~~~i~~~Cl~~dp~~RPs-----m~eVv~  360 (392)
                                  ......+.+++..|++.||++||+     ++++++
T Consensus       218 ~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~a~eil~  264 (364)
T d1omwa3         218 DRMTLTMAVELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKE  264 (364)
T ss_dssp             HHHSSSCCCCCCSSSCHHHHHHHHHHTCSSTTTSTTTSSSTHHHHHT
T ss_pred             HHhcccCCCCCCCCCCHHHHHHHHHHcccCHHHhCCCcccCHHHHHc
Confidence                        111225667888999999999999     577764

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.91  E-value=5.6e-26  Score=213.02  Aligned_cols=163  Identities=18%  Similarity=0.189  Sum_probs=122.6

Q ss_pred             CeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcC-----CCCceeecccccceeEEcCCCCCeEeee
Q 045577          200 EVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPED-----SRLEIIHRDHKTSNVLLDAEINPNISDF  274 (392)
Q Consensus       200 ~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~-----~~~~iiHrDlKp~NIll~~~~~~kl~DF  274 (392)
                      ..|+||||++++++.....+.  ...+..+++++.|+|.||.|+|+.     +..+|+||||||+|||++.++.+||+||
T Consensus        75 ~~~lv~Ey~~~g~L~~~l~~~--~l~~~~~~~~~~~ia~gl~~lH~~~~~~~~~~~IvHrDlKp~NILl~~~~~~Kl~DF  152 (303)
T d1vjya_          75 QLWLVSDYHEHGSLFDYLNRY--TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADL  152 (303)
T ss_dssp             EEEEEEECCTTCBHHHHHHHC--CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCCGGGEEECTTSCEEECCC
T ss_pred             EEEEEEecccCCCHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCeeccccCccceEEcCCCCeEEEec
Confidence            479999999999998876543  345556789999999999999973     2348999999999999999999999999


Q ss_pred             eceEEeCCCCc---ceeceeeecccccCchhHH------------HHHHHhcCCCcc-eeecccccC-------------
Q 045577          275 GPARIFGDQTE---EVTGRVIGTQTLKTVPELL------------QAWKLWSEGDPM-EIIDEQTKM-------------  325 (392)
Q Consensus       275 Gla~~~~~~~~---~~~~~~~gt~~y~a~~~~~------------~~~diws~G~v~-~~ld~~~~~-------------  325 (392)
                      |+++.......   .......||+.||| ||+.            .+.|+|++|+++ +++.+.+.+             
T Consensus       153 Gl~~~~~~~~~~~~~~~~~~~gt~~y~a-PE~~~~~~~~~~~~~~~k~Di~S~Gvvl~el~tg~~~~~~~~~~~~~~~~~  231 (303)
T d1vjya_         153 GLAVRHDSATDTIDIAPNHRVGTKRYMA-PEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDL  231 (303)
T ss_dssp             TTCEEEETTTTEECC----CCSCGGGCC-HHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTT
T ss_pred             CccccccCCCcceeccccceecccCcCC-hhhccccccccCCCcCcchhhhhhHHHHHHHhhCCCCCCcccccccchhhc
Confidence            99998753222   22334689999999 7653            368999999876 443331110             


Q ss_pred             -------------------CCCC-----CHHHHHHHHHHHHhhcccCcCCCCCHHHHHHHHccC
Q 045577          326 -------------------KGPF-----SADELVKCIEVGLLCVQQRIEDWPTMSSVLTMLSNE  365 (392)
Q Consensus       326 -------------------~~~~-----~~~~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~L~~~  365 (392)
                                         .+..     ..+....+.+++.+||+.||++|||+.||++.|+..
T Consensus       232 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ei~~~L~~i  295 (303)
T d1vjya_         232 VPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQL  295 (303)
T ss_dssp             SCSSCCHHHHHHHHTTSCCCCCCCGGGGGCHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHHH
T ss_pred             ccccchHHHHHHHHhccccCCCCCcccCChHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHHH
Confidence                               0011     112344578899999999999999999999999764

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.91  E-value=6.9e-26  Score=215.31  Aligned_cols=170  Identities=15%  Similarity=0.070  Sum_probs=131.3

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEc
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLD  264 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~  264 (392)
                      |+++++.....-..+..|+||||+++|++.....+.... .+..+..++.|++.||.|||++   +|+||||||+|||++
T Consensus        64 hp~Iv~l~~~~~~~~~~~iv~ey~~gg~L~~~~~~~~~~-~e~~~~~~~~qil~al~ylH~~---~iiHRDlKP~NILl~  139 (337)
T d1o6la_          64 HPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVF-TEERARFYGAEIVSALEYLHSR---DVVYRDIKLENLMLD  139 (337)
T ss_dssp             CTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHHHSCC-CHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEEC
T ss_pred             CCCEEEEEeeeccccccccceeccCCCchhhhhhcccCC-cHHHHHHHHHHHhhhhhhhhhc---CccccccCHHHeEec
Confidence            777777766655567799999999999998765554443 4455788999999999999998   999999999999999


Q ss_pred             CCCCCeEeeeeceEEeCCCCcceeceeeecccccCchhHH------HHHHHhcCCCcc-eeecccccCCCCCCHHH----
Q 045577          265 AEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIIDEQTKMKGPFSADE----  333 (392)
Q Consensus       265 ~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld~~~~~~~~~~~~~----  333 (392)
                      .++.+||+|||+|+..... .......+||+.||| ||+.      .+.|+||.|+++ +++.+.+++.+....+.    
T Consensus       140 ~~g~vkl~DFG~a~~~~~~-~~~~~~~~GT~~Y~a-PE~~~~~~y~~~~DiwSlGvilyeml~G~~pf~~~~~~~~~~~i  217 (337)
T d1o6la_         140 KDGHIKITDFGLCKEGISD-GATMKTFCGTPEYLA-PEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELI  217 (337)
T ss_dssp             TTSCEEECCCTTCBCSCCT-TCCBCCCEECGGGCC-GGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHH
T ss_pred             CCCCEEEeecccccccccC-CcccccceeCHHHhh-hhhccCCCCChhhcccchhhHHHHHHHCCCCCCCcCHHHHHHHH
Confidence            9999999999999865422 223344789999999 7765      378999999987 56666555544322111    


Q ss_pred             -----------HHHHHHHHHhhcccCcCCCCC-----HHHHHH
Q 045577          334 -----------LVKCIEVGLLCVQQRIEDWPT-----MSSVLT  360 (392)
Q Consensus       334 -----------~~~~~~i~~~Cl~~dp~~RPs-----m~eVv~  360 (392)
                                 ...+.+++..|++.||.+||+     +.++++
T Consensus       218 ~~~~~~~p~~~s~~~~dli~~~L~~dP~~R~~~~~~~~~eil~  260 (337)
T d1o6la_         218 LMEEIRFPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVME  260 (337)
T ss_dssp             HHCCCCCCTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHT
T ss_pred             hcCCCCCCccCCHHHHHHHHhhccCCchhhcccccccHHHHHc
Confidence                       124556888999999999995     777765

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.91  E-value=1.4e-25  Score=209.32  Aligned_cols=169  Identities=20%  Similarity=0.187  Sum_probs=131.0

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEc
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLD  264 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~  264 (392)
                      |+++++........+..|+||||++++++.....+... ..+..+..++.|++.||.|||+.   +|+||||||+||+++
T Consensus        72 HpnIv~~~~~~~~~~~~~iv~E~~~gg~L~~~i~~~~~-l~~~~~~~~~~qi~~al~yLH~~---~ivHrDiKp~Nill~  147 (293)
T d1jksa_          72 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES-LTEEEATEFLKQILNGVYYLHSL---QIAHFDLKPENIMLL  147 (293)
T ss_dssp             CTTBCCEEEEEECSSEEEEEEECCCSCBHHHHHHHHSS-CCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEES
T ss_pred             CCCCCcEEEEEEECCEEEEEEEcCCCccccchhccccc-cchhHHHHHHHHHHHHHHhhhhc---ceeecccccceEEEe
Confidence            77777776665556789999999999999887665543 34555889999999999999998   899999999999998


Q ss_pred             CCC----CCeEeeeeceEEeCCCCcceeceeeecccccCchhHH------HHHHHhcCCCcc-eeecccccCCCCCCHHH
Q 045577          265 AEI----NPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIIDEQTKMKGPFSADE  333 (392)
Q Consensus       265 ~~~----~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld~~~~~~~~~~~~~  333 (392)
                      .++    .+|++|||+++......  ......||+.|+| ||+.      .+.|+||.|+++ +++.+..++.+....+.
T Consensus       148 ~~~~~~~~vkl~DfG~a~~~~~~~--~~~~~~~t~~y~A-PE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~~~  224 (293)
T d1jksa_         148 DRNVPKPRIKIIDFGLAHKIDFGN--EFKNIFGTPEFVA-PEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQET  224 (293)
T ss_dssp             CSSSSSCCEEECCCTTCEECTTSC--BCSCCCCCGGGCC-HHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH
T ss_pred             cCCCcccceEecchhhhhhcCCCc--cccccCCCCcccC-HHHHcCCCCCCcccchhhhHHHHHHHcCCCCCCCCCHHHH
Confidence            776    48999999999875322  2234578999999 7765      378999999976 56666554443321111


Q ss_pred             -------------------HHHHHHHHHhhcccCcCCCCCHHHHHH
Q 045577          334 -------------------LVKCIEVGLLCVQQRIEDWPTMSSVLT  360 (392)
Q Consensus       334 -------------------~~~~~~i~~~Cl~~dp~~RPsm~eVv~  360 (392)
                                         ...+.+++..|++.||++|||++|+++
T Consensus       225 ~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~  270 (293)
T d1jksa_         225 LANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQ  270 (293)
T ss_dssp             HHHHHTTCCCCCHHHHTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred             HHHHHhcCCCCCchhcCCCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence                               124567888999999999999999976

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.91  E-value=1.9e-25  Score=209.99  Aligned_cols=175  Identities=18%  Similarity=0.160  Sum_probs=129.6

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhc---------------cccchhhhhHHHHHHHhhhhcCcCCCC
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFEC---------------SKYSSYVTNILYGIARVILYLPEDSRL  249 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~---------------~~~~~~~~~i~~~ia~gL~yLH~~~~~  249 (392)
                      |++.++.....-.++..|+||||+++|++.....+..+               ...+..+.+++.|||.||.|||+.   
T Consensus        70 HpnIv~~~~~~~~~~~~~iV~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~~lH~~---  146 (309)
T d1fvra_          70 HPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---  146 (309)
T ss_dssp             CTTBCCEEEEEEETTEEEEEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHT---
T ss_pred             CCCEeeEEEEEecCCeeEEEEEecCCCcHHHHHhhccccccchhhhccccccCCCCHHHHHHHHHHHHHHHHhhhcC---
Confidence            67777776654446779999999999999886544321               124445789999999999999998   


Q ss_pred             ceeecccccceeEEcCCCCCeEeeeeceEEeCCCCcceeceeeecccccCchhHH------HHHHHhcCCCcc-eeeccc
Q 045577          250 EIIHRDHKTSNVLLDAEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIIDEQ  322 (392)
Q Consensus       250 ~iiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld~~  322 (392)
                      +|+||||||+|||++.++.+||+|||+++....  ........||..|+| ||..      .+.|+||+|+++ +++.+.
T Consensus       147 ~iiHrDlkp~NIL~~~~~~~kl~DfG~a~~~~~--~~~~~~~~gt~~y~a-PE~l~~~~~~~~sDvwSfGvil~ell~~~  223 (309)
T d1fvra_         147 QFIHRDLAARNILVGENYVAKIADFGLSRGQEV--YVKKTMGRLPVRWMA-IESLNYSVYTTNSDVWSYGVLLWEIVSLG  223 (309)
T ss_dssp             TEECSCCSGGGEEECGGGCEEECCTTCEESSCE--ECCC----CCTTTCC-HHHHHHCEECHHHHHHHHHHHHHHHHTTS
T ss_pred             CccccccccceEEEcCCCceEEccccccccccc--cccccceecCCcccc-hHHhccCCCCccceeehhHHHHHHHHhcC
Confidence            899999999999999999999999999976431  112223568999999 6655      478999999877 355432


Q ss_pred             ccCCCCCC-----------------HHHHHHHHHHHHhhcccCcCCCCCHHHHHHHHccC
Q 045577          323 TKMKGPFS-----------------ADELVKCIEVGLLCVQQRIEDWPTMSSVLTMLSNE  365 (392)
Q Consensus       323 ~~~~~~~~-----------------~~~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~L~~~  365 (392)
                      ..+....+                 ......+.+++.+||+.||++||||.+|++.|++.
T Consensus       224 ~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~eil~~L~~i  283 (309)
T d1fvra_         224 GTPYCGMTCAELYEKLPQGYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRM  283 (309)
T ss_dssp             CCTTTTCCHHHHHHHGGGTCCCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             CCCCCCCCHHHHHHHHHhcCCCCCCccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHH
Confidence            22111111                 12223567788899999999999999999998875

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.91  E-value=1.9e-25  Score=210.60  Aligned_cols=167  Identities=19%  Similarity=0.211  Sum_probs=129.8

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEc
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLD  264 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~  264 (392)
                      |++.++.......++..|+||||++++++......... .....+..++.||+.||.|||++   +|+||||||+|||++
T Consensus        63 HpnIv~~~~~~~~~~~~~ivmE~~~gg~l~~~~~~~~~-~~~~~~~~~~~qi~~al~~lH~~---~iiHrDiKp~NILl~  138 (316)
T d1fota_          63 HPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQR-FPNPVAKFYAAEVCLALEYLHSK---DIIYRDLKPENILLD  138 (316)
T ss_dssp             BTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHHTSS-CCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEEC
T ss_pred             CcChhheeeeEeeCCeeeeEeeecCCcccccccccccc-ccccHHHHHHHHHHHhhhhhccC---cEEccccCchheeEc
Confidence            77888777766667789999999999988765444333 34444678999999999999998   899999999999999


Q ss_pred             CCCCCeEeeeeceEEeCCCCcceeceeeecccccCchhHH------HHHHHhcCCCcc-eeecccccCCCCCCHHH----
Q 045577          265 AEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIIDEQTKMKGPFSADE----  333 (392)
Q Consensus       265 ~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld~~~~~~~~~~~~~----  333 (392)
                      .++.+||+|||+|+.....    .....||+.||| ||+.      .+.|+||.|+++ +++.++.++.+....+.    
T Consensus       139 ~~g~vkL~DFG~a~~~~~~----~~~~~Gt~~Y~A-PE~l~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~i  213 (316)
T d1fota_         139 KNGHIKITDFGFAKYVPDV----TYTLCGTPDYIA-PEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKI  213 (316)
T ss_dssp             TTSCEEECCCSSCEECSSC----BCCCCSCTTTCC-HHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHH
T ss_pred             CCCCEEEecCccceEeccc----cccccCcccccC-HHHHcCCCCCchhhccccchhHHHHHhCCCCCCCcCHHHHHHHH
Confidence            9999999999999986532    234689999999 7766      378999999987 56666555433322111    


Q ss_pred             -----------HHHHHHHHHhhcccCcCCCC-----CHHHHHH
Q 045577          334 -----------LVKCIEVGLLCVQQRIEDWP-----TMSSVLT  360 (392)
Q Consensus       334 -----------~~~~~~i~~~Cl~~dp~~RP-----sm~eVv~  360 (392)
                                 ...+.+++.+|++.||.+||     +++++++
T Consensus       214 ~~~~~~~p~~~s~~~~~li~~~L~~dp~~R~~~~r~t~~~il~  256 (316)
T d1fota_         214 LNAELRFPPFFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKN  256 (316)
T ss_dssp             HHCCCCCCTTSCHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHT
T ss_pred             HcCCCCCCCCCCHHHHHHHHHHhhhCHHhccccchhhHHHHHc
Confidence                       22456678899999999996     8899875

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.91  E-value=1.4e-25  Score=207.46  Aligned_cols=176  Identities=18%  Similarity=0.208  Sum_probs=125.6

Q ss_pred             CCCccccccCcCC----CCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccce
Q 045577          185 SGGCKRNWEADCG----DGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSN  260 (392)
Q Consensus       185 s~GCvR~~~l~C~----~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~N  260 (392)
                      |++.++.......    +...|+||||++++++.........+ .+..+..++.||+.||.|||+.   +|+||||||+|
T Consensus        66 hpniv~~~~~~~~~~~~~~~~~lvmE~~~g~~L~~~~~~~~~l-~~~~~~~i~~qi~~al~~lH~~---~iiHrDiKP~N  141 (277)
T d1o6ya_          66 HPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPM-TPKRAIEVIADACQALNFSHQN---GIIHRDVKPAN  141 (277)
T ss_dssp             CTTBCCEEEEEEEECSSSEEEEEEEECCCEEEHHHHHHHHCSC-CHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGG
T ss_pred             CCCCCcccceeeeccCCCceEEEEEECCCCCEehhhhcccCCC-CHHHHHHHHHHHHHHHHHHHhC---CccCccccCcc
Confidence            5666665544321    12378999999999988765554443 4455889999999999999998   89999999999


Q ss_pred             eEEcCCCCCeEeeeeceEEeCC--CCcceeceeeecccccCchhHH------HHHHHhcCCCcc-eeecccccCCCCCCH
Q 045577          261 VLLDAEINPNISDFGPARIFGD--QTEEVTGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIIDEQTKMKGPFSA  331 (392)
Q Consensus       261 Ill~~~~~~kl~DFGla~~~~~--~~~~~~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld~~~~~~~~~~~  331 (392)
                      |+++.++..+++|||.++....  ..........||+.||| ||+.      .+.|+||.|+++ +++.+++++.+....
T Consensus       142 Ill~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~Gt~~Y~a-PE~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~  220 (277)
T d1o6ya_         142 IMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLS-PEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPV  220 (277)
T ss_dssp             EEEETTSCEEECCCTTCEECC----------------TTCC-HHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHH
T ss_pred             cccCccccceeehhhhhhhhccccccccccccccCcccccC-HHHHcCCCCCcceecccchHHHHHHHhCCCCCCCcCHH
Confidence            9999999999999999887642  22223344689999999 7765      478999999987 666665555433222


Q ss_pred             HH-------------------HHHHHHHHHhhcccCcCCCC-CHHHHHHHHccC
Q 045577          332 DE-------------------LVKCIEVGLLCVQQRIEDWP-TMSSVLTMLSNE  365 (392)
Q Consensus       332 ~~-------------------~~~~~~i~~~Cl~~dp~~RP-sm~eVv~~L~~~  365 (392)
                      +.                   ...+.+++.+|++.||++|| |++++.+.|...
T Consensus       221 ~~~~~~~~~~~~~~~~~~~~~s~~l~~li~~~L~~dp~~R~~sa~~l~~~l~r~  274 (277)
T d1o6ya_         221 SVAYQHVREDPIPPSARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRV  274 (277)
T ss_dssp             HHHHHHHHCCCCCGGGTSSSCCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHH
T ss_pred             HHHHHHHhcCCCCCchhccCCCHHHHHHHHHHccCCHhHCHhHHHHHHHHHHHH
Confidence            21                   13566788899999999999 899999988653

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.91  E-value=4.1e-25  Score=208.67  Aligned_cols=170  Identities=15%  Similarity=0.145  Sum_probs=132.4

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEc
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLD  264 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~  264 (392)
                      |++.++.......++..|+||||++++++.....+......+..+..++.||+.||.|||+.   +|+||||||+|||++
T Consensus        60 HpnIv~~~~~~~~~~~~~lvmE~~~gg~L~~~i~~~~~~l~e~~~~~i~~qi~~al~yLH~~---~iiHrDlKp~NIll~  136 (321)
T d1tkia_          60 HRNILHLHESFESMEELVMIFEFISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSH---NIGHFDIRPENIIYQ  136 (321)
T ss_dssp             CTTBCCEEEEEEETTEEEEEECCCCCCBHHHHHTSSSCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEES
T ss_pred             CCCCCeEEEEEEECCEEEEEEecCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHc---CCCcccccccceeec
Confidence            77777777666556789999999999999877665544456677899999999999999998   899999999999997


Q ss_pred             CC--CCCeEeeeeceEEeCCCCcceeceeeecccccCchhHH------HHHHHhcCCCcc-eeecccccCCCCCCHHH--
Q 045577          265 AE--INPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIIDEQTKMKGPFSADE--  333 (392)
Q Consensus       265 ~~--~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld~~~~~~~~~~~~~--  333 (392)
                      .+  ..+||+|||+++.....  .......||+.|++ |+..      .+.|+|+.|+++ +++.+..++.+....+.  
T Consensus       137 ~~~~~~ikl~DFG~~~~~~~~--~~~~~~~~t~~y~a-pe~~~~~~~~~~~DiWSlGvily~ll~G~~Pf~~~~~~~~~~  213 (321)
T d1tkia_         137 TRRSSTIKIIEFGQARQLKPG--DNFRLLFTAPEYYA-PEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIE  213 (321)
T ss_dssp             SSSCCCEEECCCTTCEECCTT--CEEEEEESCGGGSC-HHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHH
T ss_pred             CCCceEEEEcccchhhccccC--Cccccccccccccc-chhccCCCCCchhhcccHHHHHHHHHhCCCCCCCCCHHHHHH
Confidence            54  57899999999886432  22344678999999 6544      488999999887 55666544443322111  


Q ss_pred             -----------------HHHHHHHHHhhcccCcCCCCCHHHHHH
Q 045577          334 -----------------LVKCIEVGLLCVQQRIEDWPTMSSVLT  360 (392)
Q Consensus       334 -----------------~~~~~~i~~~Cl~~dp~~RPsm~eVv~  360 (392)
                                       ...+.+++..|++.||++|||+.|+++
T Consensus       214 ~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~s~~eil~  257 (321)
T d1tkia_         214 NIMNAEYTFDEEAFKEISIEAMDFVDRLLVKERKSRMTASEALQ  257 (321)
T ss_dssp             HHHHTCCCCCHHHHTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred             HHHhCCCCCChhhccCCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence                             124567888999999999999999987

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.91  E-value=8.1e-25  Score=209.02  Aligned_cols=167  Identities=15%  Similarity=0.105  Sum_probs=130.4

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEc
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLD  264 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~  264 (392)
                      |++.++........+..|++|||+.++++.....+...+ .+..+..++.||+.||.|||++   +|+||||||+|||++
T Consensus       100 hpnIv~~~~~~~~~~~~~~v~e~~~~g~l~~~l~~~~~l-~e~~~~~i~~qi~~aL~yLH~~---~iiHRDIKP~NILl~  175 (350)
T d1rdqe_         100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRF-SEPHARFYAAQIVLTFEYLHSL---DLIYRDLKPENLLID  175 (350)
T ss_dssp             CTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHHHCCC-CHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEC
T ss_pred             CCcEeecccccccccccccccccccccchhhhHhhcCCC-CHHHHHHHHHHHHHHHHHHHhC---CEecCcCCHHHcccC
Confidence            667666665554567789999999999998766655443 4455889999999999999998   899999999999999


Q ss_pred             CCCCCeEeeeeceEEeCCCCcceeceeeecccccCchhHH------HHHHHhcCCCcc-eeecccccCCCCCCHHH----
Q 045577          265 AEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIIDEQTKMKGPFSADE----  333 (392)
Q Consensus       265 ~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld~~~~~~~~~~~~~----  333 (392)
                      .++.+||+|||+|+.+...    .....||+.||| ||+.      .+.|+|+.|+++ +++.+..++.+......    
T Consensus       176 ~~g~ikL~DFG~a~~~~~~----~~~~~Gt~~Y~A-PE~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~i  250 (350)
T d1rdqe_         176 QQGYIQVTDFGFAKRVKGR----TWTLCGTPEALA-PEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKI  250 (350)
T ss_dssp             TTSCEEECCCTTCEECSSC----BCCCEECGGGCC-HHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHH
T ss_pred             CCCCEEeeeceeeeecccc----cccccCccccCC-HHHHcCCCCCccccccchhHHHHHHHhCCCCCCCcCHHHHHHHH
Confidence            9999999999999986422    234689999999 7766      378999999987 56666555543322211    


Q ss_pred             -----------HHHHHHHHHhhcccCcCCC-----CCHHHHHH
Q 045577          334 -----------LVKCIEVGLLCVQQRIEDW-----PTMSSVLT  360 (392)
Q Consensus       334 -----------~~~~~~i~~~Cl~~dp~~R-----Psm~eVv~  360 (392)
                                 ...+.+++..|++.||.+|     |+++++++
T Consensus       251 ~~~~~~~p~~~s~~~~~li~~~L~~dP~kR~~~~r~t~~ell~  293 (350)
T d1rdqe_         251 VSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKN  293 (350)
T ss_dssp             HHCCCCCCTTCCHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHT
T ss_pred             hcCCCCCCccCCHHHHHHHHHHhhhCHHhccccccccHHHHHc
Confidence                       1245678889999999999     48999885

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.90  E-value=1.6e-25  Score=209.36  Aligned_cols=176  Identities=18%  Similarity=0.260  Sum_probs=131.8

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEc
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLD  264 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~  264 (392)
                      |+++++.....-.++..|+||||+.++.+............+..+..++.|++.||.|||++   +|+||||||+|||++
T Consensus        60 Hp~Iv~~~~~~~~~~~~~iv~e~~~~~~~~~~~~~~~~~l~e~~~~~~~~qil~~L~yLH~~---~IiHrDiKpeNIl~~  136 (298)
T d1gz8a_          60 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH---RVLHRDLKPQNLLIN  136 (298)
T ss_dssp             CTTBCCEEEEEEETTEEEEEEECCSEEHHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEC
T ss_pred             CCcEEEeccccccccceeEEEeecCCchhhhhhhhcccCCCHHHHHHHHHHHHHHHHHhhcC---CEEccccCchheeec
Confidence            66777666555446789999999987655544333333446666899999999999999998   899999999999999


Q ss_pred             CCCCCeEeeeeceEEeCCCCcceeceeeecccccCchhHH-------HHHHHhcCCCcc-eeecccccCCCCCCHHHH--
Q 045577          265 AEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELL-------QAWKLWSEGDPM-EIIDEQTKMKGPFSADEL--  334 (392)
Q Consensus       265 ~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~-------~~~diws~G~v~-~~ld~~~~~~~~~~~~~~--  334 (392)
                      .++.+||+|||+++...... .......||+.|+| ||+.       .+.|+||.|+++ +++.++.++.+....+.+  
T Consensus       137 ~~~~~kl~DFG~a~~~~~~~-~~~~~~~gt~~y~a-pE~~~~~~~~~~~~DiwSlGvily~m~~G~~Pf~~~~~~~~~~~  214 (298)
T d1gz8a_         137 TEGAIKLADFGLARAFGVPV-RTYTHEVVTLWYRA-PEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFR  214 (298)
T ss_dssp             TTSCEEECSTTHHHHHCCCS-BCTTCCBCCCTTCC-HHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHH
T ss_pred             ccCcceeccCCcceeccCCc-ccceeecccceeee-hhhhccccCCCccccccccchhhhHHhhCCCCCCCCCHHHHHHH
Confidence            99999999999998664322 22333579999999 6654       478999999977 556665444332222211  


Q ss_pred             ------------------------------------------HHHHHHHHhhcccCcCCCCCHHHHHHH--HccC
Q 045577          335 ------------------------------------------VKCIEVGLLCVQQRIEDWPTMSSVLTM--LSNE  365 (392)
Q Consensus       335 ------------------------------------------~~~~~i~~~Cl~~dp~~RPsm~eVv~~--L~~~  365 (392)
                                                                ..+.+++.+|++.||++|||+.|+++.  |++.
T Consensus       215 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~t~~ell~H~ff~~~  289 (298)
T d1gz8a_         215 IFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDV  289 (298)
T ss_dssp             HHHHHCCCCTTTSTTGGGSTTCCTTSCCCCCCCHHHHSTTCCHHHHHHHHHHTCSSTTTSCCHHHHHTSGGGTTC
T ss_pred             HHHhcCCCchhhccccccccccccccccccccchhhhccCCCHHHHHHHHHHccCChhHCcCHHHHhCCHhhccC
Confidence                                                      245677889999999999999999885  6544

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.90  E-value=1.7e-25  Score=206.53  Aligned_cols=169  Identities=20%  Similarity=0.302  Sum_probs=126.1

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCC-CcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEE
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLP-DKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLL  263 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~-~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll  263 (392)
                      |++.++........+..|++|||+.++ ++.....+ .....+..+..++.|++.||.|||+.   +|+||||||+||++
T Consensus        68 h~nIv~~~~~~~~~~~~~lv~e~~~~~~~l~~~~~~-~~~l~e~~~~~~~~qi~~al~~lH~~---~iiHrDiKp~NIll  143 (273)
T d1xwsa_          68 FSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITE-RGALQEELARSFFWQVLEAVRHCHNC---GVLHRDIKDENILI  143 (273)
T ss_dssp             SCSBCCEEEEEECSSEEEEEEECCSSEEEHHHHHHH-HCSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEE
T ss_pred             CCCccEEEEEEeeCCeEEEEEEeccCcchHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHHHC---CCccccCcccceEE
Confidence            677887777666667899999999864 44333333 33445566889999999999999998   89999999999999


Q ss_pred             cCC-CCCeEeeeeceEEeCCCCcceeceeeecccccCchhHH-------HHHHHhcCCCcc-eeecccccCCCC------
Q 045577          264 DAE-INPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELL-------QAWKLWSEGDPM-EIIDEQTKMKGP------  328 (392)
Q Consensus       264 ~~~-~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~-------~~~diws~G~v~-~~ld~~~~~~~~------  328 (392)
                      +.+ +.+||+|||+++.....   ......||+.|+| ||+.       .+.|+||.|+++ +++.++.++...      
T Consensus       144 ~~~~~~vkl~DFG~a~~~~~~---~~~~~~GT~~y~a-PE~~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~i~~~  219 (273)
T d1xwsa_         144 DLNRGELKLIDFGSGALLKDT---VYTDFDGTRVYSP-PEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRG  219 (273)
T ss_dssp             ETTTTEEEECCCTTCEECCSS---CBCCCCSCGGGSC-HHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHHHHHC
T ss_pred             ecCCCeEEECccccceecccc---cccccccCCCcCC-HHHHcCCCCCCcccccccceeeehhHhhCCCCCCCchHHhhc
Confidence            854 78999999999875422   2234679999999 7754       367999999987 565554433221      


Q ss_pred             ---CCHHHHHHHHHHHHhhcccCcCCCCCHHHHHHH
Q 045577          329 ---FSADELVKCIEVGLLCVQQRIEDWPTMSSVLTM  361 (392)
Q Consensus       329 ---~~~~~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~  361 (392)
                         .+......+.+++.+|++.||++|||++|+++.
T Consensus       220 ~~~~~~~~s~~~~~li~~~L~~dp~~R~s~~eil~h  255 (273)
T d1xwsa_         220 QVFFRQRVSSECQHLIRWCLALRPSDRPTFEEIQNH  255 (273)
T ss_dssp             CCCCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred             ccCCCCCCCHHHHHHHHHHccCCHhHCcCHHHHhcC
Confidence               111112356677889999999999999999863

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.90  E-value=5e-25  Score=202.16  Aligned_cols=173  Identities=16%  Similarity=0.163  Sum_probs=124.8

Q ss_pred             CCCccccccCcCC-CCCeeEEecCccCCCcChhhhhhhc-cccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeE
Q 045577          185 SGGCKRNWEADCG-DGEVFLMFEGIKLPDKSEFTCEFEC-SKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVL  262 (392)
Q Consensus       185 s~GCvR~~~l~C~-~~~~~lv~e~~~~~~l~~~~~~~~~-~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIl  262 (392)
                      |++.++......+ .+..|+||||+++|++.....+... ...+..+++|+.||+.||.|||+.   +|+||||||+||+
T Consensus        59 HpnIv~~~g~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~al~ylH~~---~ivH~dlkp~Nil  135 (262)
T d1byga_          59 HSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRDLAARNVL  135 (262)
T ss_dssp             CTTBCCEEEEECCC--CCEEEECCCTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEE
T ss_pred             CCCEeeEEEEEEecCCcEEEEEeccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHhhccccccC---ceeccccchHhhe
Confidence            6666666655443 3458999999999999886654432 235566899999999999999998   8999999999999


Q ss_pred             EcCCCCCeEeeeeceEEeCCCCcceeceeeecccccCchhHH------HHHHHhcCCCcc-eeec-ccccCCC-------
Q 045577          263 LDAEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIID-EQTKMKG-------  327 (392)
Q Consensus       263 l~~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld-~~~~~~~-------  327 (392)
                      ++.++.+|++|||+++....    ......++..|+| ||+.      .+.|+||.|+++ +++. +++.+..       
T Consensus       136 ~~~~~~~kl~dfg~s~~~~~----~~~~~~~~~~y~a-PE~l~~~~~t~~sDIwSfG~il~el~t~~~~p~~~~~~~~~~  210 (262)
T d1byga_         136 VSEDNVAKVSDFGLTKEASS----TQDTGKLPVKWTA-PEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVV  210 (262)
T ss_dssp             ECTTSCEEECCCCC----------------CCTTTSC-HHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGGGHH
T ss_pred             ecCCCCEeecccccceecCC----CCccccccccCCC-hHHHhCCCCChHHHHHhHHHHHHHHHHCCCCCCCCCCHHHHH
Confidence            99999999999999986542    2223467889999 7765      378999999966 5554 3322211       


Q ss_pred             ---------CCCHHHHHHHHHHHHhhcccCcCCCCCHHHHHHHHccC
Q 045577          328 ---------PFSADELVKCIEVGLLCVQQRIEDWPTMSSVLTMLSNE  365 (392)
Q Consensus       328 ---------~~~~~~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~L~~~  365 (392)
                               +.+......+.+++.+||+.||++||||.+|+++|+..
T Consensus       211 ~~i~~~~~~~~~~~~~~~~~~li~~cl~~dP~~Rps~~~l~~~L~~i  257 (262)
T d1byga_         211 PRVEKGYKMDAPDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLEHI  257 (262)
T ss_dssp             HHHTTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             HHHHcCCCCCCCccCCHHHHHHHHHHcccCHhHCcCHHHHHHHHHHH
Confidence                     11222224667788899999999999999999999764

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.90  E-value=2.5e-25  Score=210.09  Aligned_cols=170  Identities=19%  Similarity=0.138  Sum_probs=131.1

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEc
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLD  264 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~  264 (392)
                      |++.++.....-.++..|+||||+++|++......... ..+..+..++.||+.||.|||++   +|+||||||+|||++
T Consensus        62 hp~Iv~~~~~~~~~~~~yivmEy~~~g~L~~~i~~~~~-~~e~~~~~~~~qi~~al~ylH~~---~iiHrDikp~NiL~~  137 (320)
T d1xjda_          62 HPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHK-FDLSRATFYAAEIILGLQFLHSK---GIVYRDLKLDNILLD  137 (320)
T ss_dssp             CTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHHHSS-CCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEEC
T ss_pred             CCcEEEEEEEEccCCceeEEEeecCCCcHHHHhhccCC-CCHHHHHHHHHHHHHHHHHHHhC---CeeeccCcccceeec
Confidence            67777766655556779999999999999887655443 34556889999999999999998   899999999999999


Q ss_pred             CCCCCeEeeeeceEEeCCCCcceeceeeecccccCchhHH------HHHHHhcCCCcc-eeecccccCCCCCCHHH----
Q 045577          265 AEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIIDEQTKMKGPFSADE----  333 (392)
Q Consensus       265 ~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld~~~~~~~~~~~~~----  333 (392)
                      .++.+||+|||+++...... .......||+.|+| ||+.      .+.|+||.|+++ +++.++.++.+....+.    
T Consensus       138 ~~~~~kl~DFG~a~~~~~~~-~~~~~~~gt~~y~a-PE~~~~~~~~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~~i  215 (320)
T d1xjda_         138 KDGHIKIADFGMCKENMLGD-AKTNTFCGTPDYIA-PEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSI  215 (320)
T ss_dssp             TTSCEEECCCTTCBCCCCTT-CCBCCCCSCGGGCC-HHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHH
T ss_pred             CCCceeccccchhhhccccc-ccccccCCCCCcCC-HHHHcCCCCCchhhhhhhhHHHHHHHhCCCCCCCCCHHHHHHHH
Confidence            99999999999998654222 22334689999999 7766      378999999986 56666555544322221    


Q ss_pred             -----------HHHHHHHHHhhcccCcCCCCCHH-HHHH
Q 045577          334 -----------LVKCIEVGLLCVQQRIEDWPTMS-SVLT  360 (392)
Q Consensus       334 -----------~~~~~~i~~~Cl~~dp~~RPsm~-eVv~  360 (392)
                                 ...+.+++..|++.||++||++. ++++
T Consensus       216 ~~~~~~~p~~~s~~~~dli~~~L~~dP~~R~s~~~~l~~  254 (320)
T d1xjda_         216 RMDNPFYPRWLEKEAKDLLVKLFVREPEKRLGVRGDIRQ  254 (320)
T ss_dssp             HHCCCCCCTTSCHHHHHHHHHHSCSSGGGSBTTBSCGGG
T ss_pred             HcCCCCCCccCCHHHHHHHHHhcccCCCCCcCHHHHHHh
Confidence                       12456688899999999999985 6753

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.90  E-value=4.3e-25  Score=209.76  Aligned_cols=170  Identities=16%  Similarity=0.141  Sum_probs=125.8

Q ss_pred             CCCccccccCcC----CCCCeeEEecCccCCCcChhhhhhh-ccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccc
Q 045577          185 SGGCKRNWEADC----GDGEVFLMFEGIKLPDKSEFTCEFE-CSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTS  259 (392)
Q Consensus       185 s~GCvR~~~l~C----~~~~~~lv~e~~~~~~l~~~~~~~~-~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~  259 (392)
                      |++.++......    .+...|+|||||++|+|.....+.. ....+..+..|+.||+.||.|||+.   +|+||||||+
T Consensus        64 hpnIv~l~~~~~~~~~~~~~~~ivmEy~~gg~L~~~i~~~~~~~l~e~~~~~i~~qi~~al~ylH~~---~iiHRDiKp~  140 (335)
T d2ozaa1          64 CPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPE  140 (335)
T ss_dssp             STTBCCEEEEEEEEETTEEEEEEEEECCCSEEHHHHHHSCSCCCEEHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGG
T ss_pred             CCCCCeEEEEEeecccCCCEEEEEEECCCCCcHHHHHHhcCCCCcCHHHHHHHHHHHHHHHHHHHHc---CCcccccccc
Confidence            555555544321    1245899999999999988665432 2235566899999999999999998   8999999999


Q ss_pred             eeEEcC---CCCCeEeeeeceEEeCCCCcceeceeeecccccCchhH------HHHHHHhcCCCcc-eeecccccCCCC-
Q 045577          260 NVLLDA---EINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPEL------LQAWKLWSEGDPM-EIIDEQTKMKGP-  328 (392)
Q Consensus       260 NIll~~---~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~------~~~~diws~G~v~-~~ld~~~~~~~~-  328 (392)
                      |||++.   .+.+||+|||+++......  ......||+.||| ||+      ..+.|+|+.|+++ +++.+++++.+. 
T Consensus       141 NIll~~~~~~~~~Kl~DFG~a~~~~~~~--~~~~~~gt~~y~a-PE~~~~~~y~~~~DiwSlGvily~lltg~~Pf~~~~  217 (335)
T d2ozaa1         141 NLLYTSKRPNAILKLTDFGFAKETTSHN--SLTTPCYTPYYVA-PEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNH  217 (335)
T ss_dssp             GEEESCSSTTCCEEECCCTTCEECCCCC--CCCCCSCCCSSCC-CCCCCGGGGSHHHHHHHHHHHHHHHTTSSCSCEETT
T ss_pred             ccccccccccccccccccceeeeccCCC--ccccccCCcccCC-cHHHcCCCCCHHHHHHhhchhHHHHhhCCCCCCCCC
Confidence            999975   4569999999999875322  2234679999999 554      3588999999987 455554333221 


Q ss_pred             ------------------CC----HHHHHHHHHHHHhhcccCcCCCCCHHHHHH
Q 045577          329 ------------------FS----ADELVKCIEVGLLCVQQRIEDWPTMSSVLT  360 (392)
Q Consensus       329 ------------------~~----~~~~~~~~~i~~~Cl~~dp~~RPsm~eVv~  360 (392)
                                        .+    ......+.+++..|++.||++|||+.|+++
T Consensus       218 ~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~  271 (335)
T d2ozaa1         218 GLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMN  271 (335)
T ss_dssp             CC--------CCCSCSSSCCTTHHHHSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred             HHHHHHHHHHHHhcCCCCCCCcccccCCHHHHHHHHHHccCChhHCcCHHHHHc
Confidence                              11    112345778888999999999999999987

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.90  E-value=7.4e-25  Score=205.23  Aligned_cols=157  Identities=22%  Similarity=0.334  Sum_probs=121.1

Q ss_pred             CCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEcCCCCCeEeeeeceE
Q 045577          199 GEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEINPNISDFGPAR  278 (392)
Q Consensus       199 ~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~~~~~~kl~DFGla~  278 (392)
                      ...+++|||+.++++............+..+..++.|++.||.|||++   +|+||||||+|||++.++.+||+|||+++
T Consensus        88 ~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~---~ivHrDiKp~NILi~~~~~~kl~dfg~~~  164 (305)
T d1blxa_          88 TKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLAR  164 (305)
T ss_dssp             EEEEEEEECCSCBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECSCCSCC
T ss_pred             ceEEEEEEeccCCchhhhhhccCCCCCHHHHHHHHHHHHHHHHHHHhC---CEEecCCCccEEEEcCCCCeeecchhhhh
Confidence            467999999998776554433333445566788999999999999998   89999999999999999999999999987


Q ss_pred             EeCCCCcceeceeeecccccCchhHH------HHHHHhcCCCcc-eeecccccCCCCCCHHHH-----------------
Q 045577          279 IFGDQTEEVTGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIIDEQTKMKGPFSADEL-----------------  334 (392)
Q Consensus       279 ~~~~~~~~~~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld~~~~~~~~~~~~~~-----------------  334 (392)
                      ....  ........||+.|+| ||+.      .+.|+||.|+++ +++.+++++.+....+.+                 
T Consensus       165 ~~~~--~~~~~~~~gT~~Y~A-PE~~~~~~y~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~  241 (305)
T d1blxa_         165 IYSF--QMALTSVVVTLWYRA-PEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPR  241 (305)
T ss_dssp             CCCG--GGGGCCCCCCCTTCC-HHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCGGGSCT
T ss_pred             hhcc--cccCCCcccChhhcC-cchhcCCCCChhehhhchHHHHHHHHHCCCCCCCCCHHHHHHHHHHhhCCCchhcccc
Confidence            6432  223344689999999 7765      488999999977 666665555443322222                 


Q ss_pred             -------------------------HHHHHHHHhhcccCcCCCCCHHHHHHH
Q 045577          335 -------------------------VKCIEVGLLCVQQRIEDWPTMSSVLTM  361 (392)
Q Consensus       335 -------------------------~~~~~i~~~Cl~~dp~~RPsm~eVv~~  361 (392)
                                               ..+.+++.+|++.||++|||+.|+++.
T Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~sa~e~L~H  293 (305)
T d1blxa_         242 DVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSH  293 (305)
T ss_dssp             TCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred             cccchhhhhccccccchhhccccCCHHHHHHHHHHCcCChhHCcCHHHHhcC
Confidence                                     234567889999999999999998763

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

Probab=99.88  E-value=4.4e-24  Score=198.19  Aligned_cols=170  Identities=22%  Similarity=0.274  Sum_probs=123.8

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEc
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLD  264 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~  264 (392)
                      |++.++.....-.++..+++||++.++++........+ ..+..+..++.||+.||+|||+.   +|+||||||+|||++
T Consensus        59 hpnIv~~~~~~~~~~~~~i~~e~~~~~~~~~~~~~~~~-l~~~~~~~i~~qi~~~L~~LH~~---~IvHrDiKp~NIll~  134 (286)
T d1ob3a_          59 HSNIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGG-LESVTAKSFLLQLLNGIAYCHDR---RVLHRDLKPQNLLIN  134 (286)
T ss_dssp             CTTBCCEEEEEECSSCEEEEEECCSEEHHHHHHTSTTC-CCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEC
T ss_pred             CCcEEeeeeecccCCceeEEEEeehhhhHHHHHhhcCC-cchhhhHHHHHHHHHHHHHhccC---cEEecCCCCceeeEc
Confidence            66666665554456789999999998776554433333 35555889999999999999998   899999999999999


Q ss_pred             CCCCCeEeeeeceEEeCCCCcceeceeeecccccCchhHH-------HHHHHhcCCCcc-eeecccccCCCCCCHHHH--
Q 045577          265 AEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELL-------QAWKLWSEGDPM-EIIDEQTKMKGPFSADEL--  334 (392)
Q Consensus       265 ~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~-------~~~diws~G~v~-~~ld~~~~~~~~~~~~~~--  334 (392)
                      .++.+|++|||++....... .......|++.|++ ||..       .+.|+|+.|+++ +++.++.++.+....+..  
T Consensus       135 ~~~~~kl~DfG~a~~~~~~~-~~~~~~~~~~~y~~-pE~~~~~~~~~~~~DiwslGv~l~el~~G~~pf~~~~~~~~~~~  212 (286)
T d1ob3a_         135 REGELKIADFGLARAFGIPV-RKYTHEIVTLWYRA-PDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMR  212 (286)
T ss_dssp             TTSCEEECCTTHHHHHCC----------CCCTTCC-HHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHH
T ss_pred             CCCCEEecccccceecccCc-cccceecccchhhh-HHHHhCCCCCCcceeehhcCcHHHHHHHCCCCCCCCCHHHHHHH
Confidence            99999999999997654222 22233568899999 5544       478999999976 666665554433222221  


Q ss_pred             ------------------------------------------HHHHHHHHhhcccCcCCCCCHHHHHH
Q 045577          335 ------------------------------------------VKCIEVGLLCVQQRIEDWPTMSSVLT  360 (392)
Q Consensus       335 ------------------------------------------~~~~~i~~~Cl~~dp~~RPsm~eVv~  360 (392)
                                                                ..+.+++.+|++.||++|||++|+++
T Consensus       213 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~ell~  280 (286)
T d1ob3a_         213 IFRILGTPNSKNWPNVTELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALE  280 (286)
T ss_dssp             HHHHHCCCCTTTSTTGGGSTTCCTTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             HHHhhCCCChhhccchhhhhhcccccccccCcchhhhcccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence                                                      24456788999999999999999874

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.87  E-value=2.4e-23  Score=198.78  Aligned_cols=155  Identities=21%  Similarity=0.257  Sum_probs=114.5

Q ss_pred             CeeEEecCccCCCcChhhh--hhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEcCCC-CCeEeeeec
Q 045577          200 EVFLMFEGIKLPDKSEFTC--EFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEI-NPNISDFGP  276 (392)
Q Consensus       200 ~~~lv~e~~~~~~l~~~~~--~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~~~~-~~kl~DFGl  276 (392)
                      ..|+||||++++.......  +......+..+..++.||+.||.|||++   +|+||||||+|||++.++ .+||+|||+
T Consensus        93 ~~~lv~Ey~~~~~~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~yLH~~---~IiHrDiKp~NILl~~~~~~~kl~DFG~  169 (350)
T d1q5ka_          93 YLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGS  169 (350)
T ss_dssp             EEEEEEECCSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEECTTTCCEEECCCTT
T ss_pred             EEEEEEeccCCccHHHHHhhhhccCCCCHHHHHHHHHHHHHHHHHHHhc---CCcccCCCcceEEEecCCCceeEecccc
Confidence            3689999998764433221  1222235556889999999999999998   999999999999999775 889999999


Q ss_pred             eEEeCCCCcceeceeeecccccCchhHH-------HHHHHhcCCCcc-eeecccccCCCCCCHHHH--------------
Q 045577          277 ARIFGDQTEEVTGRVIGTQTLKTVPELL-------QAWKLWSEGDPM-EIIDEQTKMKGPFSADEL--------------  334 (392)
Q Consensus       277 a~~~~~~~~~~~~~~~gt~~y~a~~~~~-------~~~diws~G~v~-~~ld~~~~~~~~~~~~~~--------------  334 (392)
                      ++.+....  ......||+.|+| ||..       .+.|+|+.|+++ +++.+.+.+......+.+              
T Consensus       170 a~~~~~~~--~~~~~~gt~~y~a-PE~~~~~~~~~~~~DIwSlG~il~el~~g~~pf~~~~~~~~l~~i~~~~g~~~~~~  246 (350)
T d1q5ka_         170 AKQLVRGE--PNVSYICSRYYRA-PELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQ  246 (350)
T ss_dssp             CEECCTTS--CCCSCCSCTTSCC-HHHHTTCSSCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHHHHHHHHHHCCCCHHH
T ss_pred             hhhccCCc--ccccccccccccC-hHHhhcccCCCcceeecccceEEEehhhCCCCCCCCCHHHHHHHHHHHhCCChHHh
Confidence            98875322  2223578999999 5443       378999999987 566665444433222221              


Q ss_pred             ------------------------------HHHHHHHHhhcccCcCCCCCHHHHHH
Q 045577          335 ------------------------------VKCIEVGLLCVQQRIEDWPTMSSVLT  360 (392)
Q Consensus       335 ------------------------------~~~~~i~~~Cl~~dp~~RPsm~eVv~  360 (392)
                                                    ..+.+++.+|++.||++|||+.|+++
T Consensus       247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~  302 (350)
T d1q5ka_         247 IREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACA  302 (350)
T ss_dssp             HHHHCC---CCCCCCCCCCCGGGTSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             hhhhccchhhccccccccCchhhhcccCCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence                                          23556778999999999999999986

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.87  E-value=3.4e-23  Score=194.94  Aligned_cols=158  Identities=21%  Similarity=0.272  Sum_probs=116.5

Q ss_pred             CCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEcCCCCCeEeeeeceE
Q 045577          199 GEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEINPNISDFGPAR  278 (392)
Q Consensus       199 ~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~~~~~~kl~DFGla~  278 (392)
                      +..|++|||++.+++....+.... .....+..++.|++.||.|||+.   +|+||||||+|||++.++.+||+|||+++
T Consensus        90 ~~~~iv~e~~~~~~~~~~~~~~~~-~~~~~~~~i~~qil~~l~~lH~~---~ivHrDlKp~NILl~~~~~~kl~dfg~~~  165 (318)
T d3blha1          90 GSIYLVFDFCEHDLAGLLSNVLVK-FTLSEIKRVMQMLLNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLAR  165 (318)
T ss_dssp             -CEEEEEECCCEEHHHHHTCTTCC-CCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCTTCE
T ss_pred             ceEEEEEeccCCCccchhhhcccc-cccHHHHHHHHHHHHHHHHhccC---CEEecCcCchheeecCCCcEEeeecceee
Confidence            568999999987776544333222 24444788999999999999998   89999999999999999999999999998


Q ss_pred             EeCCCC---cceeceeeecccccCchhHH-------HHHHHhcCCCcc-eeecccccCCCCCCHHHH-------------
Q 045577          279 IFGDQT---EEVTGRVIGTQTLKTVPELL-------QAWKLWSEGDPM-EIIDEQTKMKGPFSADEL-------------  334 (392)
Q Consensus       279 ~~~~~~---~~~~~~~~gt~~y~a~~~~~-------~~~diws~G~v~-~~ld~~~~~~~~~~~~~~-------------  334 (392)
                      ......   ........||+.|+| ||..       .+.|+||.|+++ +++.+++.+.+..+.+..             
T Consensus       166 ~~~~~~~~~~~~~~~~~gT~~Y~a-PE~~~~~~~~~~k~DiwSlGvil~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~  244 (318)
T d3blha1         166 AFSLAKNSQPNRYTNRVVTLWYRP-PELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPE  244 (318)
T ss_dssp             ECCC-----CCCCCSCCSCGGGCC-HHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTT
T ss_pred             ecccccccccccccceecCHHHhh-HHHHcCCCCCCcHHHcccCCceeeeHhhCCCCCCCCCHHHHHHHHHHhcCCCChh
Confidence            765221   112223579999999 6654       478999999977 555554444332221111             


Q ss_pred             ----------------------------------HHHHHHHHhhcccCcCCCCCHHHHHHH
Q 045577          335 ----------------------------------VKCIEVGLLCVQQRIEDWPTMSSVLTM  361 (392)
Q Consensus       335 ----------------------------------~~~~~i~~~Cl~~dp~~RPsm~eVv~~  361 (392)
                                                        ..+++++.+|++.||++|||++|+++.
T Consensus       245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~sa~elL~H  305 (318)
T d3blha1         245 VWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNH  305 (318)
T ss_dssp             TSTTCCCC-------CCSSCCBCHHHHHHHHHCCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred             hccccchhhhhhhhcccccccccchhhhccccCCHHHHHHHHHHCcCChhHCcCHHHHHcC
Confidence                                              123467889999999999999999865

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.86  E-value=8.1e-23  Score=190.74  Aligned_cols=163  Identities=18%  Similarity=0.124  Sum_probs=118.5

Q ss_pred             CCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEc---CCCCCeEeee
Q 045577          198 DGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLD---AEINPNISDF  274 (392)
Q Consensus       198 ~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~---~~~~~kl~DF  274 (392)
                      ++..++||||+.++.. ..............+..++.|++.||+|||++   +|+||||||+||+++   .+..+||+||
T Consensus        75 ~~~~~ivme~~~~~l~-~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~iiHrDiKp~NIl~~~~~~~~~vkl~DF  150 (299)
T d1ckia_          75 GDYNVMVMELLGPSLE-DLFNFCSRKFSLKTVLLLADQMISRIEYIHSK---NFIHRDVKPDNFLMGLGKKGNLVYIIDF  150 (299)
T ss_dssp             TTEEEEEEECCCCBHH-HHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECCGGGTTCEEECCC
T ss_pred             CCEEEEEEEEcCCchh-hhhhhccCCCcHHHHHHHHHHHHHHHHHHHHC---CeeeccCCHhhccccccCCCceeeeecc
Confidence            4567899999965433 32222222345556899999999999999998   899999999999985   4557999999


Q ss_pred             eceEEeCCCCc------ceeceeeecccccCchhHH------HHHHHhcCCCcc-eeecccccCCCCCCHH---------
Q 045577          275 GPARIFGDQTE------EVTGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIIDEQTKMKGPFSAD---------  332 (392)
Q Consensus       275 Gla~~~~~~~~------~~~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld~~~~~~~~~~~~---------  332 (392)
                      |+|+.+.....      .......||+.||| ||..      .+.|+||.|+++ +++.++.++.......         
T Consensus       151 G~a~~~~~~~~~~~~~~~~~~~~~gt~~y~a-PE~~~~~~~~~~~DiwSlG~~l~el~tg~~P~~~~~~~~~~~~~~~~~  229 (299)
T d1ckia_         151 GLAKKYRDARTHQHIPYRENKNLTGTARYAS-INTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERIS  229 (299)
T ss_dssp             SSCEECBCTTTCCBCCCCBCCSCCCCSSSCC-HHHHTTBCCCHHHHHHHHHHHHHHHHHSSCTTCCCC-------HHHHH
T ss_pred             CcceeccccccccceeccccCCcCCCccccC-HHHHhCCCCCChhhEEecCHHHHHHHhCCCcccccchHHHHHHHHHhh
Confidence            99998753221      12334679999999 7654      588999999876 5666654443321110         


Q ss_pred             --------------HHHHHHHHHHhhcccCcCCCCCHHHHHHHHccC
Q 045577          333 --------------ELVKCIEVGLLCVQQRIEDWPTMSSVLTMLSNE  365 (392)
Q Consensus       333 --------------~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~L~~~  365 (392)
                                    ....+.+++..|++.+|++||+++++.+.|+..
T Consensus       230 ~~~~~~~~~~~~~~~p~~~~~li~~cl~~~p~~RP~~~~i~~~l~~~  276 (299)
T d1ckia_         230 EKKMSTPIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNL  276 (299)
T ss_dssp             HHHHHSCHHHHTTTSCHHHHHHHHHHHHSCTTCCCCHHHHHHHHHHH
T ss_pred             cccCCCChhHhccCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHH
Confidence                          012466788899999999999999998888753

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.86  E-value=5.4e-23  Score=194.06  Aligned_cols=170  Identities=18%  Similarity=0.109  Sum_probs=128.1

Q ss_pred             CCccccccCcCCCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEcC
Q 045577          186 GGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDA  265 (392)
Q Consensus       186 ~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~~  265 (392)
                      ++.++.....+.....+++|||+.++++......... .....+..++.|++.||.|||+.   +|+||||||+||+++.
T Consensus        89 pnIv~~~~~~~~~~~~~~v~e~~~~~~L~~~i~~~~~-~~e~~~~~~~~Qi~~al~~lH~~---~ivHrDiKp~Nill~~  164 (322)
T d1vzoa_          89 PFLVTLHYAFQTETKLHLILDYINGGELFTHLSQRER-FTEHEVQIYVGEIVLALEHLHKL---GIIYRDIKLENILLDS  164 (322)
T ss_dssp             TTBCCEEEEEEETTEEEEEECCCCSCBHHHHHHHHSC-CCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECT
T ss_pred             CeEEEeeeeeccCCceeeeeecccccHHHHHHHhccc-ccHHHHHHHHHHHHHHHHHhhcC---CEEeccCCccceeecC
Confidence            4566655555556789999999999999775543332 24455788899999999999998   8999999999999999


Q ss_pred             CCCCeEeeeeceEEeCCCCcceeceeeecccccCchhHH--------HHHHHhcCCCcc-eeecccccCCCCCC------
Q 045577          266 EINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELL--------QAWKLWSEGDPM-EIIDEQTKMKGPFS------  330 (392)
Q Consensus       266 ~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~--------~~~diws~G~v~-~~ld~~~~~~~~~~------  330 (392)
                      ++.+||+|||+++.+............|++.|++ |+..        .+.|+||.|+++ +++.+..++.+...      
T Consensus       165 ~~~vkL~DFG~a~~~~~~~~~~~~~~~g~~~~~~-pe~~~~~~~~~~~ksDIWSlG~iLyelltG~~PF~~~~~~~~~~~  243 (322)
T d1vzoa_         165 NGHVVLTDFGLSKEFVADETERAYDFCGTIEYMA-PDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAE  243 (322)
T ss_dssp             TSCEEESCSSEEEECCGGGGGGGCGGGSCCTTCC-HHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCCHHH
T ss_pred             CCCEEEeeccchhhhcccccccccccccccccch-hHHhhcCCcCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHH
Confidence            9999999999999876433333444678999999 5443        268999999987 56655544433211      


Q ss_pred             -------------HHHHHHHHHHHHhhcccCcCCCCC-----HHHHHH
Q 045577          331 -------------ADELVKCIEVGLLCVQQRIEDWPT-----MSSVLT  360 (392)
Q Consensus       331 -------------~~~~~~~~~i~~~Cl~~dp~~RPs-----m~eVv~  360 (392)
                                   .+....+.+++..|++.||++||+     ++|+++
T Consensus       244 i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~R~s~~~~t~~eil~  291 (322)
T d1vzoa_         244 ISRRILKSEPPYPQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKE  291 (322)
T ss_dssp             HHHHHHHCCCCCCTTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHT
T ss_pred             HHHhcccCCCCCcccCCHHHHHHHHHHcccCHHHcCCCCcccHHHHHc
Confidence                         122235667888999999999995     788875

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.86  E-value=1.6e-22  Score=192.63  Aligned_cols=170  Identities=21%  Similarity=0.261  Sum_probs=123.1

Q ss_pred             CCCccccccCc------CCCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeeccccc
Q 045577          185 SGGCKRNWEAD------CGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKT  258 (392)
Q Consensus       185 s~GCvR~~~l~------C~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp  258 (392)
                      |+++++.....      ....+.|+||||+. .++... .+.. ......+..++.|++.||.|||++   +|+||||||
T Consensus        76 hpniv~l~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~-~~~~-~l~~~~~~~~~~qi~~aL~~LH~~---~IiHrDiKp  149 (346)
T d1cm8a_          76 HENVIGLLDVFTPDETLDDFTDFYLVMPFMG-TDLGKL-MKHE-KLGEDRIQFLVYQMLKGLRYIHAA---GIIHRDLKP  149 (346)
T ss_dssp             BTTBCCCSEEECSCSSTTTCCCCEEEEECCS-EEHHHH-HHHC-CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCG
T ss_pred             CCCeeEEEEEeccCccccccceEEEEEeccc-ccHHHH-HHhc-cccHHHHHHHHHHHHHHHHHHHhC---CCcccccCc
Confidence            55555554332      12346799999994 333332 2222 345556889999999999999998   899999999


Q ss_pred             ceeEEcCCCCCeEeeeeceEEeCCCCcceeceeeecccccCchhHH-------HHHHHhcCCCcc-eeecccccCCCCCC
Q 045577          259 SNVLLDAEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELL-------QAWKLWSEGDPM-EIIDEQTKMKGPFS  330 (392)
Q Consensus       259 ~NIll~~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~-------~~~diws~G~v~-~~ld~~~~~~~~~~  330 (392)
                      +|||++.++.+|++|||+++.....    .....||+.|+| ||..       .+.|+|+.|+++ +++.+.+++.+...
T Consensus       150 ~NIL~~~~~~~kl~Dfg~a~~~~~~----~~~~~~t~~y~a-PE~~~~~~~~~~~~DiwSlGvil~ell~g~~pf~~~~~  224 (346)
T d1cm8a_         150 GNLAVNEDCELKILDFGLARQADSE----MTGYVVTRWYRA-PEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDH  224 (346)
T ss_dssp             GGEEECTTCCEEECCCTTCEECCSS----CCSSCSCGGGCC-THHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSH
T ss_pred             chhhcccccccccccccceeccCCc----cccccccccccC-HHHHcCCCCCCccchhhcchHHHHHHHHCcCCCCCCCh
Confidence            9999999999999999999886432    233578999999 6654       368999999987 56565444433211


Q ss_pred             HHH----------------------------------------------HHHHHHHHHhhcccCcCCCCCHHHHHHH--H
Q 045577          331 ADE----------------------------------------------LVKCIEVGLLCVQQRIEDWPTMSSVLTM--L  362 (392)
Q Consensus       331 ~~~----------------------------------------------~~~~~~i~~~Cl~~dp~~RPsm~eVv~~--L  362 (392)
                      .+.                                              ...+.+++..|++.||++|||+.|+++.  |
T Consensus       225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~eiL~Hp~f  304 (346)
T d1cm8a_         225 LDQLKEIMKVTGTPPAEFVQRLQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHPYF  304 (346)
T ss_dssp             HHHHHHHHHHHCCCCHHHHHTCSCHHHHHHHHHSCCCCCCCGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGG
T ss_pred             HHHHHHHHhccCCCcHHHHhhhcchhhhhhhccCCcccccchHHhccCCCHHHHHHHHHHCcCChhHCcCHHHHhcChhh
Confidence            111                                              1245567889999999999999999975  6


Q ss_pred             ccC
Q 045577          363 SNE  365 (392)
Q Consensus       363 ~~~  365 (392)
                      +..
T Consensus       305 ~~~  307 (346)
T d1cm8a_         305 ESL  307 (346)
T ss_dssp             TTT
T ss_pred             CcC
Confidence            554

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.86  E-value=9e-23  Score=194.39  Aligned_cols=171  Identities=18%  Similarity=0.245  Sum_probs=122.5

Q ss_pred             CCCccccccCcCC----CCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccce
Q 045577          185 SGGCKRNWEADCG----DGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSN  260 (392)
Q Consensus       185 s~GCvR~~~l~C~----~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~N  260 (392)
                      |+++++.......    ....+++|+++.+++|.......  ...+..+..++.|++.||.|||++   +|+||||||+|
T Consensus        65 hp~iv~~~~~~~~~~~~~~~~~~l~~~~~~g~L~~~l~~~--~l~~~~i~~i~~qil~al~yLH~~---~iiHRDIKp~N  139 (345)
T d1pmea_          65 HENIIGINDIIRAPTIEQMKDVYLVTHLMGADLYKLLKTQ--HLSNDHICYFLYQILRGLKYIHSA---NVLHRDLKPSN  139 (345)
T ss_dssp             CTTBCCCCEEECCSSTTTCCCEEEEEECCCEEHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGG
T ss_pred             CCCCCcEEEEEeeccccccceEEEEEeecCCchhhhhhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCCCcce
Confidence            5666655443221    22334445566678887654332  245666889999999999999998   89999999999


Q ss_pred             eEEcCCCCCeEeeeeceEEeCCC--CcceeceeeecccccCchhHH-------HHHHHhcCCCcc-eeecccccCCCCCC
Q 045577          261 VLLDAEINPNISDFGPARIFGDQ--TEEVTGRVIGTQTLKTVPELL-------QAWKLWSEGDPM-EIIDEQTKMKGPFS  330 (392)
Q Consensus       261 Ill~~~~~~kl~DFGla~~~~~~--~~~~~~~~~gt~~y~a~~~~~-------~~~diws~G~v~-~~ld~~~~~~~~~~  330 (392)
                      ||++.++.+||+|||+++.....  .........||+.|+| ||+.       .+.|+|+.|+++ +++.++.++.....
T Consensus       140 ILl~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~gt~~y~a-PE~l~~~~~~~~~~DiwSlG~il~eml~g~~pf~~~~~  218 (345)
T d1pmea_         140 LLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRA-PEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHY  218 (345)
T ss_dssp             EEECTTCCEEECCCTTCEECCGGGCBCCTTCCCCSCGGGCC-GGGTTTBCSCSTHHHHHHHHHHHHHHHHSSCSCCCSSH
T ss_pred             EEECCCCCEEEcccCceeeccCCCccceeeccccccceech-HHHhhcCCCCCchhhhhccCceehHHhhCCCCCCCCCH
Confidence            99999999999999999886522  1122344679999999 6654       378999999877 56665444433211


Q ss_pred             HHH----------------------------------------------HHHHHHHHHhhcccCcCCCCCHHHHHHH
Q 045577          331 ADE----------------------------------------------LVKCIEVGLLCVQQRIEDWPTMSSVLTM  361 (392)
Q Consensus       331 ~~~----------------------------------------------~~~~~~i~~~Cl~~dp~~RPsm~eVv~~  361 (392)
                      .+.                                              ..++.+++..|++.||++|||+.|+++.
T Consensus       219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~ta~e~L~h  295 (345)
T d1pmea_         219 LDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAH  295 (345)
T ss_dssp             HHHHHHHHHHHCSCCHHHHHTCCCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred             HHHHHHHhhhccCCChhhhhhhhhhhhhcccccCCccCCCCHHHhCCCCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence            100                                              0246678889999999999999999875

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=99.85  E-value=2.6e-22  Score=186.92  Aligned_cols=163  Identities=13%  Similarity=0.095  Sum_probs=121.4

Q ss_pred             CCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEcC-----CCCCeEe
Q 045577          198 DGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDA-----EINPNIS  272 (392)
Q Consensus       198 ~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~~-----~~~~kl~  272 (392)
                      ++..|+||||+. +++...............+..++.|++.||.|||+.   +|+||||||+||+++.     ++.+||+
T Consensus        73 ~~~~~~vme~~~-~~l~~~~~~~~~~~~~~~~~~i~~q~~~~l~~lH~~---giiHrDiKp~Nili~~~~~~~~~~vkl~  148 (293)
T d1csna_          73 GLHNVLVIDLLG-PSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIHEK---SLVYRDIKPDNFLIGRPNSKNANMIYVV  148 (293)
T ss_dssp             TTEEEEEEECCC-CBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEECCSSSTTTTCEEEC
T ss_pred             CCccEEEEEecC-CCHHHHHHhhccchhhHHHHHHHHHHHHHHHHHHHC---CceeccCCccceeecCcccccCCceEEc
Confidence            466899999994 666554444444445566789999999999999998   8999999999999964     5679999


Q ss_pred             eeeceEEeCCCCc------ceeceeeecccccCchhHH------HHHHHhcCCCcc-eeecccccCCCCCCH--H-H---
Q 045577          273 DFGPARIFGDQTE------EVTGRVIGTQTLKTVPELL------QAWKLWSEGDPM-EIIDEQTKMKGPFSA--D-E---  333 (392)
Q Consensus       273 DFGla~~~~~~~~------~~~~~~~gt~~y~a~~~~~------~~~diws~G~v~-~~ld~~~~~~~~~~~--~-~---  333 (392)
                      |||+|+.+.....      .......||+.||| ||..      .+.|+||.|+++ +++.+..++.+....  . .   
T Consensus       149 DFG~a~~~~~~~~~~~~~~~~~~~~~GT~~y~a-PE~~~~~~~~~~~DiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~  227 (293)
T d1csna_         149 DFGMVKFYRDPVTKQHIPYREKKNLSGTARYMS-INTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYER  227 (293)
T ss_dssp             CCTTCEESBCTTTCCBCCCCCCCCCCSCTTTCC-HHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHH
T ss_pred             ccceeEEcccCccccceeecccCceEEchhhcC-HHHhcCCCCChHHHHHHhhHHHHHHHhCCCcCCCccchhHHHHHHH
Confidence            9999998752211      12334679999999 7755      478999999877 666665555432111  0 0   


Q ss_pred             -----------------HHHHHHHHHhhcccCcCCCCCHHHHHHHHccC
Q 045577          334 -----------------LVKCIEVGLLCVQQRIEDWPTMSSVLTMLSNE  365 (392)
Q Consensus       334 -----------------~~~~~~i~~~Cl~~dp~~RPsm~eVv~~L~~~  365 (392)
                                       ...+.+++..|++.+|++||+++.+.+.|+..
T Consensus       228 i~~~~~~~~~~~l~~~~p~~l~~ii~~~~~~~~~~rP~y~~l~~~l~~~  276 (293)
T d1csna_         228 IGEKKQSTPLRELCAGFPEEFYKYMHYARNLAFDATPDYDYLQGLFSKV  276 (293)
T ss_dssp             HHHHHHHSCHHHHTTTSCHHHHHHHHHHHHCCTTCCCCHHHHHHHHHHH
T ss_pred             HHhccCCCChHHhcCCCCHHHHHHHHHHhcCCcccCcCHHHHHHHHHHH
Confidence                             12456677789999999999999988887654

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

Probab=99.85  E-value=2.9e-22  Score=189.35  Aligned_cols=166  Identities=17%  Similarity=0.181  Sum_probs=121.0

Q ss_pred             CCCccccccCcC--CCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeE
Q 045577          185 SGGCKRNWEADC--GDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVL  262 (392)
Q Consensus       185 s~GCvR~~~l~C--~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIl  262 (392)
                      |+++++......  .....++||||+.++++.....    ...+..+..++.||+.||.|||++   +|+||||||+|||
T Consensus        89 hpnIv~~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~----~l~e~~i~~i~~qil~aL~~LH~~---gIvHrDiKp~NIL  161 (328)
T d3bqca1          89 GPNIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQ----TLTDYDIRFYMYEILKALDYCHSM---GIMHRDVKPHNVM  161 (328)
T ss_dssp             STTBCCEEEEEECTTTCSEEEEEECCCSCBGGGTTT----SCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEE
T ss_pred             CCCCcEEEEEEEecCCCceeEEEeecCCCcHHHHhc----CCCHHHHHHHHHHHHHHHHHHhhc---ccccccccccceE
Confidence            566666554432  2356899999999999865421    234555788999999999999998   8999999999999


Q ss_pred             EcCCC-CCeEeeeeceEEeCCCCcceeceeeecccccCchhHH-------HHHHHhcCCCcc-eeecccccCCCCCCHH-
Q 045577          263 LDAEI-NPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELL-------QAWKLWSEGDPM-EIIDEQTKMKGPFSAD-  332 (392)
Q Consensus       263 l~~~~-~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~-------~~~diws~G~v~-~~ld~~~~~~~~~~~~-  332 (392)
                      ++.++ .+||+|||+++......  ......||+.|+| ||..       .+.|+|+.|+++ +++.++.++....+.. 
T Consensus       162 i~~~~~~vkl~DFG~a~~~~~~~--~~~~~~~t~~y~a-PE~~~~~~~~~~~~DiwslG~~l~e~~~g~~pf~~~~~~~~  238 (328)
T d3bqca1         162 IDHEHRKLRLIDWGLAEFYHPGQ--EYNVRVASRYFKG-PELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYD  238 (328)
T ss_dssp             EETTTTEEEECCGGGCEECCTTC--CCCSCCSCGGGCC-HHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHH
T ss_pred             EcCCCCeeeecccccceeccCCC--cccccccCccccC-cccccCCCCCCcccchhhhhhhhHHhccCCCCCCCCchhHH
Confidence            98665 58999999998865322  2233578999999 6654       478999999876 4444433332221110 


Q ss_pred             ----------------------------------------------------HHHHHHHHHHhhcccCcCCCCCHHHHHH
Q 045577          333 ----------------------------------------------------ELVKCIEVGLLCVQQRIEDWPTMSSVLT  360 (392)
Q Consensus       333 ----------------------------------------------------~~~~~~~i~~~Cl~~dp~~RPsm~eVv~  360 (392)
                                                                          ....+.+++.+|++.||++|||++|+++
T Consensus       239 ~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~e~L~  318 (328)
T d3bqca1         239 QLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAME  318 (328)
T ss_dssp             HHHHHHHHHCHHHHHHHHHHTTCCCCGGGGGTCCCCCCCCGGGGCCTTTGGGCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             HHHHHHHHHCCchhhhhhhhcccccCcccchhcccccccchhhcccccccccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence                                                                1123566788999999999999999876

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.84  E-value=4.9e-22  Score=184.38  Aligned_cols=170  Identities=18%  Similarity=0.206  Sum_probs=122.9

Q ss_pred             CCCccccccCcCCCCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEc
Q 045577          185 SGGCKRNWEADCGDGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLD  264 (392)
Q Consensus       185 s~GCvR~~~l~C~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~  264 (392)
                      |+++++...........++++|++.++++.......... ....+..++.|++.||+|||++   +|+||||||+|||++
T Consensus        60 h~niv~~~~~~~~~~~~~iv~~~~~~~~l~~~~~~~~~~-~~~~~~~~~~q~~~aL~~lH~~---~IvHrDiKP~NIli~  135 (292)
T d1unla_          60 HKNIVRLHDVLHSDKKLTLVFEFCDQDLKKYFDSCNGDL-DPEIVKSFLFQLLKGLGFCHSR---NVLHRDLKPQNLLIN  135 (292)
T ss_dssp             CTTBCCEEEEEECSSEEEEEEECCSEEHHHHHHHTTTCC-CHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEC
T ss_pred             cCCEEeeccccccccceeEEeeecccccccccccccccc-chhHHHHHHHHHHHHHHHhhcC---CEeeecccCcccccc
Confidence            556665555444456789999999988876655444333 4455789999999999999998   899999999999999


Q ss_pred             CCCCCeEeeeeceEEeCCCCcceeceeeecccccCchhHH-------HHHHHhcCCCcc-eeecccccCCCCCCHH-H--
Q 045577          265 AEINPNISDFGPARIFGDQTEEVTGRVIGTQTLKTVPELL-------QAWKLWSEGDPM-EIIDEQTKMKGPFSAD-E--  333 (392)
Q Consensus       265 ~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~-------~~~diws~G~v~-~~ld~~~~~~~~~~~~-~--  333 (392)
                      .++.+||+|||.++....... ......+++.|++ |++.       .+.|+||.|+++ +++.++.++....+.. .  
T Consensus       136 ~~~~~kl~DFG~a~~~~~~~~-~~~~~~~~~~~~~-pe~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~~~~~~~~~~~  213 (292)
T d1unla_         136 RNGELKLANFGLARAFGIPVR-CYSAEVVTLWYRP-PDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLK  213 (292)
T ss_dssp             TTCCEEECCCTTCEECCSCCS-CCCSCCSCGGGCC-HHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHH
T ss_pred             cCCceeeeecchhhcccCCCc-cceeeccccchhh-hhHhccCCCCCchhhccccchHHHHHhhCCCCCCCCCCHHHHHH
Confidence            999999999999998753222 2222345666776 6554       478999999987 5555433322211111 1  


Q ss_pred             ------------------------------------------HHHHHHHHHhhcccCcCCCCCHHHHHH
Q 045577          334 ------------------------------------------LVKCIEVGLLCVQQRIEDWPTMSSVLT  360 (392)
Q Consensus       334 ------------------------------------------~~~~~~i~~~Cl~~dp~~RPsm~eVv~  360 (392)
                                                                ...+.+++.+|++.||++|||++|+++
T Consensus       214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~sa~e~L~  282 (292)
T d1unla_         214 RIFRLLGTPTEEQWPSMTKLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQ  282 (292)
T ss_dssp             HHHHHHCCCCTTTCTTGGGSTTCCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred             HHHhhcCCCChhhhhhhhhcccccccccccccchhhhccccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence                                                      123456788999999999999999876

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.81  E-value=4.3e-21  Score=182.61  Aligned_cols=157  Identities=22%  Similarity=0.274  Sum_probs=113.8

Q ss_pred             CCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEcCCCCCeEeeeeceE
Q 045577          199 GEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEINPNISDFGPAR  278 (392)
Q Consensus       199 ~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~~~~~~kl~DFGla~  278 (392)
                      ...+++|+++.+++|.......  ...+..+..++.||+.||.|||++   +|+||||||+|||++.++.+|++|||++.
T Consensus        95 ~~~~~i~~~~~gg~L~~~~~~~--~l~e~~~~~i~~qil~aL~~LH~~---giiHrDiKp~NILi~~~~~~kl~dfg~a~  169 (348)
T d2gfsa1          95 FNDVYLVTHLMGADLNNIVKCQ--KLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR  169 (348)
T ss_dssp             CCCCEEEEECCSEEHHHHHTTC--CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECCC----
T ss_pred             CceEEEEEeecCCchhhhcccc--cccHHHHHHHHHHHHHHHHHHHhC---CCcccccCCccccccccccccccccchhc
Confidence            4456677788888887654332  245556889999999999999998   89999999999999999999999999987


Q ss_pred             EeCCCCcceeceeeecccccCchhHH-------HHHHHhcCCCcc-eeecccccCCCCCCHHH-----------------
Q 045577          279 IFGDQTEEVTGRVIGTQTLKTVPELL-------QAWKLWSEGDPM-EIIDEQTKMKGPFSADE-----------------  333 (392)
Q Consensus       279 ~~~~~~~~~~~~~~gt~~y~a~~~~~-------~~~diws~G~v~-~~ld~~~~~~~~~~~~~-----------------  333 (392)
                      ...    .......|++.|+| ||..       .+.|+|+.|+++ +++.+++.+.+......                 
T Consensus       170 ~~~----~~~~~~~g~~~y~a-pE~~~~~~~~~~~~DiwSlGv~l~~ll~g~~pF~~~~~~~~~~~i~~~~~~~~~~~~~  244 (348)
T d2gfsa1         170 HTD----DEMTGYVATRWYRA-PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLK  244 (348)
T ss_dssp             CCT----GGGSSSCHHHHTSC-HHHHTTCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHT
T ss_pred             ccC----cccccccccccccC-chhhcCCccCCcccchhhhhHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChHHhh
Confidence            643    22233578999999 6543       378999999977 56666544433211111                 


Q ss_pred             -----------------------------HHHHHHHHHhhcccCcCCCCCHHHHHHH--HccC
Q 045577          334 -----------------------------LVKCIEVGLLCVQQRIEDWPTMSSVLTM--LSNE  365 (392)
Q Consensus       334 -----------------------------~~~~~~i~~~Cl~~dp~~RPsm~eVv~~--L~~~  365 (392)
                                                   ...+.+++.+|++.||++|||+.|+++.  +...
T Consensus       245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~elL~Hp~f~~~  307 (348)
T d2gfsa1         245 KISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY  307 (348)
T ss_dssp             TCCCHHHHHHHTTSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTTT
T ss_pred             hccchhhhhhhhhcccCCCcchhhhcCCCCHHHHHHHHHHCcCChhhCcCHHHHhcCHhhCCC
Confidence                                         1235677889999999999999999873  5543

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.80  E-value=8.8e-21  Score=181.16  Aligned_cols=154  Identities=21%  Similarity=0.235  Sum_probs=109.2

Q ss_pred             CCCeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEcCCCCCeEeeeece
Q 045577          198 DGEVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEINPNISDFGPA  277 (392)
Q Consensus       198 ~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~~~~~~kl~DFGla  277 (392)
                      ....|+||||+.++.+....   . ......+..++.|++.||.|||+.   +|+||||||+|||++.++..|++|||++
T Consensus        94 ~~~~~iv~Ey~~~~l~~~~~---~-~~~~~~i~~~~~qil~gl~~LH~~---giiHrDlKP~Nil~~~~~~~kl~df~~~  166 (355)
T d2b1pa1          94 FQDVYLVMELMDANLCQVIQ---M-ELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLA  166 (355)
T ss_dssp             CCEEEEEEECCSEEHHHHHT---S-CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCCCC-
T ss_pred             CceeEEEEeccchHHHHhhh---c-CCCHHHHHHHHHHHHHHHHHhhhc---ccccccCCccccccccccceeeechhhh
Confidence            35789999999876554321   1 124455888999999999999998   8999999999999999999999999998


Q ss_pred             EEeCCCCcceeceeeecccccCchhHHH------HHHHhcCCCcc-eeecccccCCCCCCH-------------------
Q 045577          278 RIFGDQTEEVTGRVIGTQTLKTVPELLQ------AWKLWSEGDPM-EIIDEQTKMKGPFSA-------------------  331 (392)
Q Consensus       278 ~~~~~~~~~~~~~~~gt~~y~a~~~~~~------~~diws~G~v~-~~ld~~~~~~~~~~~-------------------  331 (392)
                      +.....  .......||+.|+| ||...      +.|+|+.|+++ +++.+++.+.+....                   
T Consensus       167 ~~~~~~--~~~~~~~~t~~y~a-PE~l~~~~~~~~~DiwSlG~~l~ell~g~~pF~~~~~~~~~~~i~~~~~~~~~~~~~  243 (355)
T d2b1pa1         167 RTAGTS--FMMTPYVVTRYYRA-PEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMK  243 (355)
T ss_dssp             ----------------CCTTCC-HHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHT
T ss_pred             hccccc--cccccccccccccC-hhhhcCCCCCCCcccccccchHHHHhhCCCCCCCCCHHHHHHHHHHhccCCCHHHHH
Confidence            875422  22334578999999 77763      68999999976 566665544332111                   


Q ss_pred             --------------------------------------HHHHHHHHHHHhhcccCcCCCCCHHHHHHH
Q 045577          332 --------------------------------------DELVKCIEVGLLCVQQRIEDWPTMSSVLTM  361 (392)
Q Consensus       332 --------------------------------------~~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~  361 (392)
                                                            .....+.+++.+|++.||++|||++|+++.
T Consensus       244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~ta~elL~H  311 (355)
T d2b1pa1         244 KLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQH  311 (355)
T ss_dssp             TSCHHHHHHHHTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred             HhhhhHHHHhhcCccccccccccccccccccccccccccCCHHHHHHHHHHCcCChhHCcCHHHHhcC
Confidence                                                  112345678889999999999999999855

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.72  E-value=1.8e-18  Score=164.86  Aligned_cols=172  Identities=20%  Similarity=0.219  Sum_probs=117.2

Q ss_pred             CeeEEecCccCCCcCh--hhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEcCCCC------CeE
Q 045577          200 EVFLMFEGIKLPDKSE--FTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEIN------PNI  271 (392)
Q Consensus       200 ~~~lv~e~~~~~~l~~--~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~~~~~------~kl  271 (392)
                      ..+++|+++..+....  .............+..++.|++.||.|||+..  +|+||||||+|||++.++.      +|+
T Consensus        96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~qil~al~~lh~~~--~IvHrDlKp~NIll~~~~~~~~~~~~kl  173 (362)
T d1q8ya_          96 GVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRC--GIIHTDIKPENVLMEIVDSPENLIQIKI  173 (362)
T ss_dssp             EEEEEEEECCCCEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTT--CEECSCCSGGGEEEEEEETTTTEEEEEE
T ss_pred             ceeeeeeecccccccccccccccccCCcHHHHHHHHHHHHHHHHHHhhhc--CcccccCChhHeeeeccCcccccceeeE
Confidence            4556666665444322  22223333455567889999999999999732  8999999999999986653      899


Q ss_pred             eeeeceEEeCCCCcceeceeeecccccCchhHHH------HHHHhcCCCcc-eeecccccCCC-----------------
Q 045577          272 SDFGPARIFGDQTEEVTGRVIGTQTLKTVPELLQ------AWKLWSEGDPM-EIIDEQTKMKG-----------------  327 (392)
Q Consensus       272 ~DFGla~~~~~~~~~~~~~~~gt~~y~a~~~~~~------~~diws~G~v~-~~ld~~~~~~~-----------------  327 (392)
                      +|||.+.....    ......||+.|+| ||+..      +.|+|+.|+++ +++.++..+.+                 
T Consensus       174 ~dfg~s~~~~~----~~~~~~gt~~y~a-PE~~~~~~~~~~~DiwSlG~il~el~~g~~pF~~~~~~~~~~~~~~~~~~~  248 (362)
T d1q8ya_         174 ADLGNACWYDE----HYTNSIQTREYRS-PEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQII  248 (362)
T ss_dssp             CCCTTCEETTB----CCCSCCSCGGGCC-HHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CHHHHHHHHH
T ss_pred             eeccccccccc----ccccccccccccC-hhhccccCCCccccccchHHHHHHHHHCCCCCCCCccccccchhHHHHHHH
Confidence            99999987532    2233579999999 77553      68999999876 44443222211                 


Q ss_pred             ----------------------------------------------CCCHHHHHHHHHHHHhhcccCcCCCCCHHHHHHH
Q 045577          328 ----------------------------------------------PFSADELVKCIEVGLLCVQQRIEDWPTMSSVLTM  361 (392)
Q Consensus       328 ----------------------------------------------~~~~~~~~~~~~i~~~Cl~~dp~~RPsm~eVv~~  361 (392)
                                                                    .........+.+++.+|++.||.+|||+.|+++.
T Consensus       249 ~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~Rpta~e~L~H  328 (362)
T d1q8ya_         249 ELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLVNH  328 (362)
T ss_dssp             HHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBCHHHHHTC
T ss_pred             HHhCCCCHHHhhcccccccccccchhhhccccccCCchhhhcccccccCcccCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence                                                          1122344567788999999999999999999875


Q ss_pred             --HccC--CCCCCCCCCcccc
Q 045577          362 --LSNE--SIKVPQPEEVCFA  378 (392)
Q Consensus       362 --L~~~--~~~~~~p~~p~~~  378 (392)
                        +++.  ..+.+.|..+...
T Consensus       329 p~f~~~~~~~~~~~p~~~~~~  349 (362)
T d1q8ya_         329 PWLKDTLGMEEIRVPDRELYG  349 (362)
T ss_dssp             GGGTTCTTCTTCCCTTSCTTC
T ss_pred             cccCCCCCcccCCCCCcccCC
Confidence              5432  2345555555553

>d1xd5a_ b.78.1.1 (A:) Gastrodianin (antifungal protein) {Gastrodia elata [TaxId: 91201]}

class: All beta proteins
fold: beta-Prism II
superfamily: alpha-D-mannose-specific plant lectins
family: alpha-D-mannose-specific plant lectins
domain: Gastrodianin (antifungal protein)
species: Gastrodia elata [TaxId: 91201]

Probab=99.48  E-value=1e-13  Score=109.08  Aligned_cols=93  Identities=20%  Similarity=0.291  Sum_probs=71.5

Q ss_pred             CCCcEEecCCCeEEeeecCCCCCCceEEEEEEeCCCCceEEEecCCCCccc---cccCCCCC------ceEEEecCCCCC
Q 045577           29 EVRDILLAPSTLWGGNSLIPGNSSQSFLVISYKNLPPLVIWVANRNGSINS---NLSQDNDL------GIIWNVILPRAT   99 (392)
Q Consensus        29 ~~~~~l~s~~~~f~~gf~~~~~~~~~~~~i~~~~~~~~~vW~anr~~p~~~---~~~~~~~~------~~~w~~~~~~~~   99 (392)
                      ..+++|+  +|.|.+.|...++     |.+++   +.++||.||++.|..+   .+..||+|      ..+|++++....
T Consensus        11 ~~g~~l~--~g~~~l~~q~DGN-----Lvly~---~~~~vW~s~~~~~~~~~~l~l~~dGnLvl~~~~~~~w~s~t~~~~   80 (112)
T d1xd5a_          11 DTGGSLA--EGGYLFIIQNDCN-----LVLYD---NNRAVWASGTNGKASGCVLKMQNDGNLVIYSGSRAIWASNTNRQN   80 (112)
T ss_dssp             CTTCEEE--ETTEEEEECTTSC-----EEEEE---TTEEEEECCCTTSCSSEEEEECTTSCEEEEETTEEEEECCCCCSC
T ss_pred             cCCCEEE--ECCEEEEEcCCCC-----EEEEc---CCcEEEEccCccCCCCcEEEEeccccEEEEecCCeEEEEeeccCC
Confidence            4467776  4889999987654     34444   3489999999988765   57788988      468887765555


Q ss_pred             CCceEEEecCCCeEEEeccCCCCCceEEeeecCCCC
Q 045577          100 GSPALQLLVAGNLVLREFSLSHSEGYLWESFDSPSD  135 (392)
Q Consensus       100 ~~~~~~l~d~Gnlvl~~~~~~~~~~~~Wqsfd~ptd  135 (392)
                      +..+|+|+|+|||||++.+    +..+|||+.+|++
T Consensus        81 ~~~~l~L~ddGNlvly~~~----~~~~W~S~t~~~n  112 (112)
T d1xd5a_          81 GNYYLILQRDRNVVIYDNS----NNAIWATHTNVGN  112 (112)
T ss_dssp             CCCEEEECTTSCEEEECTT----SCEEEECCCCCCC
T ss_pred             CceEEEEcCCCCEEEECCC----CcEEecCCCccCC
Confidence            5678999999999998643    6789999999985

>d1jpca_ b.78.1.1 (A:) Lectin (agglutinin) {Snowdrop (Galanthus nivalis) [TaxId: 4670]}

class: All beta proteins
fold: beta-Prism II
superfamily: alpha-D-mannose-specific plant lectins
family: alpha-D-mannose-specific plant lectins
domain: Lectin (agglutinin)
species: Snowdrop (Galanthus nivalis) [TaxId: 4670]

Probab=99.36  E-value=8.4e-13  Score=102.96  Aligned_cols=87  Identities=21%  Similarity=0.188  Sum_probs=65.1

Q ss_pred             CCCcEEecCCCeEEeeecCCCCCCceEEEEEEeCCCCceEEEecCCCCccc---cccCCCCC-------ceEEEecCCCC
Q 045577           29 EVRDILLAPSTLWGGNSLIPGNSSQSFLVISYKNLPPLVIWVANRNGSINS---NLSQDNDL-------GIIWNVILPRA   98 (392)
Q Consensus        29 ~~~~~l~s~~~~f~~gf~~~~~~~~~~~~i~~~~~~~~~vW~anr~~p~~~---~~~~~~~~-------~~~w~~~~~~~   98 (392)
                      ..+++|.  +|.|.+.|...++     |.++.   ..++||.||++.|..+   .+..+|+|       .++|++++...
T Consensus        11 ~~G~~l~--ng~~~l~~q~DGN-----Lvly~---~~~~vW~s~~~~~~~~~~l~l~~~Gnlvl~~~~g~~vWsS~t~~~   80 (108)
T d1jpca_          11 STGEFLN--YGSFVFIMQEDCN-----LVLYD---VDKPIWATNTGGLSRSCFLSMQTDGNLVVYNPSNKPIWASNTGGQ   80 (108)
T ss_dssp             CTTCEEE--ETTEEEEECTTSC-----EEEEE---TTEEEEECCCTTSCSSCEEEECTTSCEEEECTTCCEEEECCCCCS
T ss_pred             cCCCEEE--cCCEEEEECCCCe-----EEEEe---CCceeeEeCCCCCCCccEEEEeccceEEEECCCccceEEccccCC
Confidence            3456663  5889999887664     35554   3478999999988654   56677877       58999987544


Q ss_pred             CCCceEEEecCCCeEEEeccCCCCCceEEeeecC
Q 045577           99 TGSPALQLLVAGNLVLREFSLSHSEGYLWESFDS  132 (392)
Q Consensus        99 ~~~~~~~l~d~Gnlvl~~~~~~~~~~~~Wqsfd~  132 (392)
                      ....+|+|+|+|||||++.       .+||||+|
T Consensus        81 ~~~~~l~L~ddGNlVly~~-------~~W~S~t~  107 (108)
T d1jpca_          81 NGNYVCILQKDRNVVIYGT-------DRWATGTH  107 (108)
T ss_dssp             CSCEEEEECTTSCEEEEEC-------CCCCCCCC
T ss_pred             CCcEEEEEcCCCCEEEeCC-------CcccCCCC
Confidence            4556789999999999752       38999987

>d1kj1a_ b.78.1.1 (A:) Lectin (agglutinin) {Garlic (Allium sativum) [TaxId: 4682]}

class: All beta proteins
fold: beta-Prism II
superfamily: alpha-D-mannose-specific plant lectins
family: alpha-D-mannose-specific plant lectins
domain: Lectin (agglutinin)
species: Garlic (Allium sativum) [TaxId: 4682]

Probab=99.34  E-value=2.9e-12  Score=99.90  Aligned_cols=86  Identities=21%  Similarity=0.269  Sum_probs=64.1

Q ss_pred             CCcEEecCCCeEEeeecCCCCCCceEEEEEEeCCCCceEEEecCCCCccc----cccCCCCC-------ceEEEecCCCC
Q 045577           30 VRDILLAPSTLWGGNSLIPGNSSQSFLVISYKNLPPLVIWVANRNGSINS----NLSQDNDL-------GIIWNVILPRA   98 (392)
Q Consensus        30 ~~~~l~s~~~~f~~gf~~~~~~~~~~~~i~~~~~~~~~vW~anr~~p~~~----~~~~~~~~-------~~~w~~~~~~~   98 (392)
                      .++.|.  +|.|.++|...++     |.+ |.  ..++||+||++.|+..    .+..||+|       .++|++++...
T Consensus        12 ~g~~l~--~g~~~l~~q~dgn-----Lvl-~~--~~~~vW~ant~~~~~~~~~l~l~~dGnLvl~~~~g~~vW~s~t~~~   81 (109)
T d1kj1a_          12 AGQSLD--VEPYHFIMQEDCN-----LVL-YD--HSTSVWASNTGILGKKGCKAVLQSDGNFVVYDAEGRSLWASHSVRG   81 (109)
T ss_dssp             TTCEEE--ETTEEEEECTTSC-----EEE-EE--TTEEEEECCCCCTTCCCCEEEECTTSCEEEECSSSCEEEECCCCCC
T ss_pred             CCCEEE--eCCEEEEecCCCe-----EEE-Ee--CCEEEEEeCCCCCCceeEEEEEcCCceEEEEeCCCcEEEEEeeECC
Confidence            356665  4779998876543     233 33  3378999999998865    56778888       58999987555


Q ss_pred             CCCceEEEecCCCeEEEeccCCCCCceEEeeecC
Q 045577           99 TGSPALQLLVAGNLVLREFSLSHSEGYLWESFDS  132 (392)
Q Consensus        99 ~~~~~~~l~d~Gnlvl~~~~~~~~~~~~Wqsfd~  132 (392)
                      .+...|.|+|+|||||++       ..+|||+-+
T Consensus        82 ~~~~~l~L~ddGNlvly~-------~~~W~S~t~  108 (109)
T d1kj1a_          82 NGNYVLVLQEDGNVVIYG-------SDIWSTGTY  108 (109)
T ss_dssp             SSCCEEEECTTSCEEEEC-------CEEEECCCC
T ss_pred             CCCEEEEEeCCCcEEEEC-------CCEecCCCc
Confidence            566789999999999973       249999865

>d1dlpa2 b.78.1.1 (A:116-235) Fetuin-binding protein Scafet precursor {Bluebell (Scilla campanulata) [TaxId: 81759]}

class: All beta proteins
fold: beta-Prism II
superfamily: alpha-D-mannose-specific plant lectins
family: alpha-D-mannose-specific plant lectins
domain: Fetuin-binding protein Scafet precursor
species: Bluebell (Scilla campanulata) [TaxId: 81759]

Probab=99.23  E-value=2.3e-12  Score=102.29  Aligned_cols=71  Identities=14%  Similarity=0.124  Sum_probs=57.0

Q ss_pred             EEEEeCCCC-ceEEEecCCCCccc-----cccCCCCC------ceEEEecCCCCCCCceEEEecCCCeEEEeccCCCCCc
Q 045577           57 VISYKNLPP-LVIWVANRNGSINS-----NLSQDNDL------GIIWNVILPRATGSPALQLLVAGNLVLREFSLSHSEG  124 (392)
Q Consensus        57 ~i~~~~~~~-~~vW~anr~~p~~~-----~~~~~~~~------~~~w~~~~~~~~~~~~~~l~d~Gnlvl~~~~~~~~~~  124 (392)
                      .|||..++. +.+|++|++.|++.     .+..||+|      ..+|++++........+.|+++|||||++.+    +.
T Consensus        11 ~il~~~~~~~~~~~~l~~~q~l~~g~y~L~~q~DGNLvL~~~~~~vW~s~t~~~~~~~~~~l~~~GnLvl~d~~----~~   86 (120)
T d1dlpa2          11 SILYSTQGNDNHPQTLHATQSLQLSPYRLSMETDCNLVLFDRDDRVWSTNTAGKGTGCRAVLQPNGRMDVLTNQ----NI   86 (120)
T ss_dssp             EECCCC--CCCCCCEECSSCCCBCSSCEEEEETTTEEEEEBTTBCCSCCCCCSSCSSCEEEEETTTEEEEEETT----TE
T ss_pred             eEEEcCCCCCCcccEEcCCCeeEcCCEEEEEcCCCcEEEecCCcEEEEEccccCCCcEEEEEeCCeeEEEEcCC----CC
Confidence            589988776 88999999999976     46788988      5789988755444678999999999998754    68


Q ss_pred             eEEeeec
Q 045577          125 YLWESFD  131 (392)
Q Consensus       125 ~~Wqsfd  131 (392)
                      ++|||+.
T Consensus        87 ~lW~S~t   93 (120)
T d1dlpa2          87 AVWTSGN   93 (120)
T ss_dssp             EEEECCC
T ss_pred             EEEEeCC
Confidence            9999995

>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: RIO1-like kinases
domain: Rio2 serine protein kinase C-terminal domain
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=99.10  E-value=1.2e-11  Score=106.46  Aligned_cols=70  Identities=21%  Similarity=0.177  Sum_probs=56.1

Q ss_pred             CeeEEecCccCCCcChhhhhhhccccchhhhhHHHHHHHhhhhcCcCCCCceeecccccceeEEcCCCCCeEeeeeceEE
Q 045577          200 EVFLMFEGIKLPDKSEFTCEFECSKYSSYVTNILYGIARVILYLPEDSRLEIIHRDHKTSNVLLDAEINPNISDFGPARI  279 (392)
Q Consensus       200 ~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NIll~~~~~~kl~DFGla~~  279 (392)
                      ..+++|||++++.....        .......++.|++.+|.|||+.   +|+||||||+|||++++ .++|+|||+|+.
T Consensus        84 ~~~lvme~~~~~~~~~l--------~~~~~~~i~~ql~~~l~~lH~~---giiHrDiKP~NILv~~~-~~~liDFG~a~~  151 (191)
T d1zara2          84 GNAVLMELIDAKELYRV--------RVENPDEVLDMILEEVAKFYHR---GIVHGDLSQYNVLVSEE-GIWIIDFPQSVE  151 (191)
T ss_dssp             TTEEEEECCCCEEGGGC--------CCSCHHHHHHHHHHHHHHHHHT---TEECSCCSTTSEEEETT-EEEECCCTTCEE
T ss_pred             CCEEEEEeeccccccch--------hhHHHHHHHHHHHHHHHHHhhC---CEEEccCChhheeeeCC-CEEEEECCCccc
Confidence            34799999987544321        1223567899999999999998   89999999999999865 589999999987


Q ss_pred             eC
Q 045577          280 FG  281 (392)
Q Consensus       280 ~~  281 (392)
                      ..
T Consensus       152 ~~  153 (191)
T d1zara2         152 VG  153 (191)
T ss_dssp             TT
T ss_pred             CC
Confidence            54

>d1b2pa_ b.78.1.1 (A:) Lectin (agglutinin) {Bluebell (Scilla campanulata) [TaxId: 81759]}

class: All beta proteins
fold: beta-Prism II
superfamily: alpha-D-mannose-specific plant lectins
family: alpha-D-mannose-specific plant lectins
domain: Lectin (agglutinin)
species: Bluebell (Scilla campanulata) [TaxId: 81759]

Probab=98.88  E-value=4.6e-09  Score=82.56  Aligned_cols=82  Identities=23%  Similarity=0.312  Sum_probs=61.2

Q ss_pred             ecCCCeEEeeecCCCCCCceEEEEEEeCCCCceEEEecCCCCccc---cccCCCCC-------ceEEEecCCCCCCCceE
Q 045577           35 LAPSTLWGGNSLIPGNSSQSFLVISYKNLPPLVIWVANRNGSINS---NLSQDNDL-------GIIWNVILPRATGSPAL  104 (392)
Q Consensus        35 ~s~~~~f~~gf~~~~~~~~~~~~i~~~~~~~~~vW~anr~~p~~~---~~~~~~~~-------~~~w~~~~~~~~~~~~~  104 (392)
                      .+..|.|.+.|-..++      -+.|.  +.++||.||+..+..+   .+..+|+|       ..+|++++....+..++
T Consensus        26 ~~~~~~y~l~mQ~DGN------LVLy~--~~~~vWssnt~~~~~~~~l~l~~dGnLvL~d~~g~~vWsS~t~~~~~~~~l   97 (119)
T d1b2pa_          26 LFGTHVYRFIMQTDCN------LVLYD--NNNPIWATNTGGLGNGCRAVLQPDGVLVVITNENVTVWQSPVAGKAGHYVL   97 (119)
T ss_dssp             EETTEEEEEEECTTSC------EEEEE--TTEEEEECCCTTSCSSCEEEECTTSCEEEECTTCCEEEECSCCCCSSCEEE
T ss_pred             ecCCceEEEEECCCCc------EEEEE--CCeEEEEecCCCCCcceEEEEEeCCCEEEECCCCcEEEECCCcCCCCceEE
Confidence            5567889998887664      22344  3478999999877654   56778887       58999987544455678


Q ss_pred             EEecCCCeEEEeccCCCCCceEEeeec
Q 045577          105 QLLVAGNLVLREFSLSHSEGYLWESFD  131 (392)
Q Consensus       105 ~l~d~Gnlvl~~~~~~~~~~~~Wqsfd  131 (392)
                      +|+|+|||||++       ..+|||-.
T Consensus        98 ~Lq~DGNlvlYg-------~~~W~S~T  117 (119)
T d1b2pa_          98 VLQPDRNVVIYG-------DALWATQT  117 (119)
T ss_dssp             EECTTSCEEEEE-------SEEEECCC
T ss_pred             EEcCCCCEEEEC-------CCEeccCC
Confidence            999999999973       36999964

>d1dlpa1 b.78.1.1 (A:1-115) Fetuin-binding protein Scafet precursor {Bluebell (Scilla campanulata) [TaxId: 81759]}

class: All beta proteins
fold: beta-Prism II
superfamily: alpha-D-mannose-specific plant lectins
family: alpha-D-mannose-specific plant lectins
domain: Fetuin-binding protein Scafet precursor
species: Bluebell (Scilla campanulata) [TaxId: 81759]

Probab=98.68  E-value=5.6e-08  Score=75.67  Aligned_cols=98  Identities=20%  Similarity=0.198  Sum_probs=66.2

Q ss_pred             hhhccCCCCCccCCCcEEecCCCeEEeeecCCCCCCceEEEEEEeCCCCceEEEecCCCCccc--cccCCCCC-------
Q 045577           17 FLFSLSSGSDETEVRDILLAPSTLWGGNSLIPGNSSQSFLVISYKNLPPLVIWVANRNGSINS--NLSQDNDL-------   87 (392)
Q Consensus        17 ~~~~~~~~~~~~~~~~~l~s~~~~f~~gf~~~~~~~~~~~~i~~~~~~~~~vW~anr~~p~~~--~~~~~~~~-------   87 (392)
                      +++...+..+....++.|  .+|.|.+.+-..++     |.++.   +..+||.+|...+-..  .+..+|+|       
T Consensus         6 ~~~~~~~~~~tl~~~~~l--~~g~~~l~~q~DGN-----LvL~~---~~~~vW~s~t~~~~~~~l~l~~dGNLvl~d~~~   75 (115)
T d1dlpa1           6 GLSHEGSHPQTLHAAQSL--ELSSFRFTMQSDCN-----LVLFD---SDVRVWASNTAGATGCRAVLQSDGLLVILTAQN   75 (115)
T ss_dssp             CSSSSSCSCSCCCTTCEE--CSTTEEEEECTTSC-----EEEEE---SSSEEECCCCCSCSCCBCCBCSSSCBCCBCTTT
T ss_pred             ecCCCCCCcceecCCCcE--EcCCEEEEECCCCe-----EEEEc---CCeeEEEcccCCCCceEEEEeccCCEEEEccCC
Confidence            333333333344556776  46779998887664     34443   3478999997543222  67788888       


Q ss_pred             ceEEEecCCCCCCCceEEEecCCCeEEEeccCCCCCceEEeeec
Q 045577           88 GIIWNVILPRATGSPALQLLVAGNLVLREFSLSHSEGYLWESFD  131 (392)
Q Consensus        88 ~~~w~~~~~~~~~~~~~~l~d~Gnlvl~~~~~~~~~~~~Wqsfd  131 (392)
                      .+||++++....+...++|.++|||||++       ..+|+|-.
T Consensus        76 ~~vWsS~t~~~~g~y~l~Lq~DGNlvlY~-------~~~Wssgt  112 (115)
T d1dlpa1          76 TIRWSSGTKGSIGNYVLVLQPDRTVTIYG-------PGLWDSGT  112 (115)
T ss_dssp             CCSCCCCCCCCSSCCEEEECSSSCEEEEC-------SEEEECSC
T ss_pred             CEEEEcCCCCCCCCEEEEECCCCcEEEeC-------CCeecCCC
Confidence            58999987555566679999999999963       36899854

>d1dlpa1 b.78.1.1 (A:1-115) Fetuin-binding protein Scafet precursor {Bluebell (Scilla campanulata) [TaxId: 81759]}

class: All beta proteins
fold: beta-Prism II
superfamily: alpha-D-mannose-specific plant lectins
family: alpha-D-mannose-specific plant lectins
domain: Fetuin-binding protein Scafet precursor
species: Bluebell (Scilla campanulata) [TaxId: 81759]

Probab=98.59  E-value=3.8e-09  Score=82.49  Aligned_cols=70  Identities=16%  Similarity=0.109  Sum_probs=54.3

Q ss_pred             EEEeCCCC-ceEEEecCCCCccc-----cccCCCCC------ceEEEecCCCCCCCceEEEecCCCeEEEeccCCCCCce
Q 045577           58 ISYKNLPP-LVIWVANRNGSINS-----NLSQDNDL------GIIWNVILPRATGSPALQLLVAGNLVLREFSLSHSEGY  125 (392)
Q Consensus        58 i~~~~~~~-~~vW~anr~~p~~~-----~~~~~~~~------~~~w~~~~~~~~~~~~~~l~d~Gnlvl~~~~~~~~~~~  125 (392)
                      |||.-.++ +..|+.+.+.++.+     .+..||+|      .++|++++.. .....+.|+++|||||++.    .+.+
T Consensus         3 ~~~~~~~~~~~~~tl~~~~~l~~g~~~l~~q~DGNLvL~~~~~~vW~s~t~~-~~~~~l~l~~dGNLvl~d~----~~~~   77 (115)
T d1dlpa1           3 ILFGLSHEGSHPQTLHAAQSLELSSFRFTMQSDCNLVLFDSDVRVWASNTAG-ATGCRAVLQSDGLLVILTA----QNTI   77 (115)
T ss_dssp             CCBCSSSSSCSCSCCCTTCEECSTTEEEEECTTSCEEEEESSSEEECCCCCS-CSCCBCCBCSSSCBCCBCT----TTCC
T ss_pred             EEEecCCCCCCcceecCCCcEEcCCEEEEECCCCeEEEEcCCeeEEEcccCC-CCceEEEEeccCCEEEEcc----CCCE
Confidence            56654344 67799999999976     46789998      5799998743 4567899999999999754    3679


Q ss_pred             EEeeecC
Q 045577          126 LWESFDS  132 (392)
Q Consensus       126 ~Wqsfd~  132 (392)
                      ||||+..
T Consensus        78 vWsS~t~   84 (115)
T d1dlpa1          78 RWSSGTK   84 (115)
T ss_dssp             SCCCCCC
T ss_pred             EEEcCCC
Confidence            9999864

>d1b2pa_ b.78.1.1 (A:) Lectin (agglutinin) {Bluebell (Scilla campanulata) [TaxId: 81759]}

class: All beta proteins
fold: beta-Prism II
superfamily: alpha-D-mannose-specific plant lectins
family: alpha-D-mannose-specific plant lectins
domain: Lectin (agglutinin)
species: Bluebell (Scilla campanulata) [TaxId: 81759]

Probab=97.77  E-value=2.2e-05  Score=60.95  Aligned_cols=45  Identities=22%  Similarity=0.229  Sum_probs=34.3

Q ss_pred             cCCCCC------ceEEEecCCCCCCCceEEEecCCCeEEEeccCCCCCceEEeee
Q 045577           82 SQDNDL------GIIWNVILPRATGSPALQLLVAGNLVLREFSLSHSEGYLWESF  130 (392)
Q Consensus        82 ~~~~~~------~~~w~~~~~~~~~~~~~~l~d~Gnlvl~~~~~~~~~~~~Wqsf  130 (392)
                      ..||+|      ..+|++++........+.|.++|||||.+.+    +.++|+|.
T Consensus        37 Q~DGNLVLy~~~~~vWssnt~~~~~~~~l~l~~dGnLvL~d~~----g~~vWsS~   87 (119)
T d1b2pa_          37 QTDCNLVLYDNNNPIWATNTGGLGNGCRAVLQPDGVLVVITNE----NVTVWQSP   87 (119)
T ss_dssp             CTTSCEEEEETTEEEEECCCTTSCSSCEEEECTTSCEEEECTT----CCEEEECS
T ss_pred             CCCCcEEEEECCeEEEEecCCCCCcceEEEEEeCCCEEEECCC----CcEEEECC
Confidence            356665      4799999755444678999999999997644    67999974

>d1dlpa2 b.78.1.1 (A:116-235) Fetuin-binding protein Scafet precursor {Bluebell (Scilla campanulata) [TaxId: 81759]}

class: All beta proteins
fold: beta-Prism II
superfamily: alpha-D-mannose-specific plant lectins
family: alpha-D-mannose-specific plant lectins
domain: Fetuin-binding protein Scafet precursor
species: Bluebell (Scilla campanulata) [TaxId: 81759]

Probab=97.45  E-value=0.00011  Score=56.95  Aligned_cols=58  Identities=22%  Similarity=0.401  Sum_probs=41.2

Q ss_pred             CceEEEecCCCCccc---cccCCCCC-------ceEEEecCCCCCCCceEEEecCCCeEEEeccCCCCCceEEee
Q 045577           65 PLVIWVANRNGSINS---NLSQDNDL-------GIIWNVILPRATGSPALQLLVAGNLVLREFSLSHSEGYLWES  129 (392)
Q Consensus        65 ~~~vW~anr~~p~~~---~~~~~~~~-------~~~w~~~~~~~~~~~~~~l~d~Gnlvl~~~~~~~~~~~~Wqs  129 (392)
                      ..+||.+|-...-..   .|..+|+|       .++|++++....+...+.|.++|||||++       ..+|.|
T Consensus        53 ~~~vW~s~t~~~~~~~~~~l~~~GnLvl~d~~~~~lW~S~t~~~~~~~~l~Lq~DGnlvlY~-------~~~W~t  120 (120)
T d1dlpa2          53 DDRVWSTNTAGKGTGCRAVLQPNGRMDVLTNQNIAVWTSGNSRSAGRYVFVLQPDRNLAIYG-------GALWTT  120 (120)
T ss_dssp             TBCCSCCCCCSSCSSCEEEEETTTEEEEEETTTEEEEECCCCCSSSCCEEEECSSSCEEEEC-------CCCCBC
T ss_pred             CcEEEEEccccCCCcEEEEEeCCeeEEEEcCCCCEEEEeCCCCCCCcEEEEECCCCcEEEeC-------CCcccC
Confidence            367898885433222   56678888       57999987555555678999999999973       247865

>d1jpca_ b.78.1.1 (A:) Lectin (agglutinin) {Snowdrop (Galanthus nivalis) [TaxId: 4670]}

class: All beta proteins
fold: beta-Prism II
superfamily: alpha-D-mannose-specific plant lectins
family: alpha-D-mannose-specific plant lectins
domain: Lectin (agglutinin)
species: Snowdrop (Galanthus nivalis) [TaxId: 4670]

Probab=97.44  E-value=7.7e-05  Score=56.67  Aligned_cols=38  Identities=29%  Similarity=0.367  Sum_probs=30.6

Q ss_pred             ceEEEecCCCCCCCceEEEecCCCeEEEeccCCCCCceEEee
Q 045577           88 GIIWNVILPRATGSPALQLLVAGNLVLREFSLSHSEGYLWES  129 (392)
Q Consensus        88 ~~~w~~~~~~~~~~~~~~l~d~Gnlvl~~~~~~~~~~~~Wqs  129 (392)
                      .+||++++........+.|.++|||||.+.+    +.++|+|
T Consensus        38 ~~vW~s~~~~~~~~~~l~l~~~Gnlvl~~~~----g~~vWsS   75 (108)
T d1jpca_          38 KPIWATNTGGLSRSCFLSMQTDGNLVVYNPS----NKPIWAS   75 (108)
T ss_dssp             EEEEECCCTTSCSSCEEEECTTSCEEEECTT----CCEEEEC
T ss_pred             ceeeEeCCCCCCCccEEEEeccceEEEECCC----ccceEEc
Confidence            4799999755444568999999999997644    7899997

>d1kj1a_ b.78.1.1 (A:) Lectin (agglutinin) {Garlic (Allium sativum) [TaxId: 4682]}

class: All beta proteins
fold: beta-Prism II
superfamily: alpha-D-mannose-specific plant lectins
family: alpha-D-mannose-specific plant lectins
domain: Lectin (agglutinin)
species: Garlic (Allium sativum) [TaxId: 4682]

Probab=97.32  E-value=0.00014  Score=55.32  Aligned_cols=38  Identities=21%  Similarity=0.265  Sum_probs=29.5

Q ss_pred             ceEEEecCCCCC-CCceEEEecCCCeEEEeccCCCCCceEEee
Q 045577           88 GIIWNVILPRAT-GSPALQLLVAGNLVLREFSLSHSEGYLWES  129 (392)
Q Consensus        88 ~~~w~~~~~~~~-~~~~~~l~d~Gnlvl~~~~~~~~~~~~Wqs  129 (392)
                      .+||++|+.... ....+.|.++|||||.+.+    +.++|+|
T Consensus        38 ~~vW~ant~~~~~~~~~l~l~~dGnLvl~~~~----g~~vW~s   76 (109)
T d1kj1a_          38 TSVWASNTGILGKKGCKAVLQSDGNFVVYDAE----GRSLWAS   76 (109)
T ss_dssp             EEEEECCCCCTTCCCCEEEECTTSCEEEECSS----SCEEEEC
T ss_pred             EEEEEeCCCCCCceeEEEEEcCCceEEEEeCC----CcEEEEE
Confidence            479999875432 3467899999999997644    7899998

>d1xd5a_ b.78.1.1 (A:) Gastrodianin (antifungal protein) {Gastrodia elata [TaxId: 91201]}

class: All beta proteins
fold: beta-Prism II
superfamily: alpha-D-mannose-specific plant lectins
family: alpha-D-mannose-specific plant lectins
domain: Gastrodianin (antifungal protein)
species: Gastrodia elata [TaxId: 91201]

Probab=96.94  E-value=0.0013  Score=49.87  Aligned_cols=37  Identities=22%  Similarity=0.350  Sum_probs=28.3

Q ss_pred             ceEEEecCCCCCCCceEEEecCCCeEEEeccCCCCCceEEee
Q 045577           88 GIIWNVILPRATGSPALQLLVAGNLVLREFSLSHSEGYLWES  129 (392)
Q Consensus        88 ~~~w~~~~~~~~~~~~~~l~d~Gnlvl~~~~~~~~~~~~Wqs  129 (392)
                      .+||+++.......+.+.|..+|||||++.     +..+|.|
T Consensus        38 ~~vW~s~~~~~~~~~~l~l~~dGnLvl~~~-----~~~~w~s   74 (112)
T d1xd5a_          38 RAVWASGTNGKASGCVLKMQNDGNLVIYSG-----SRAIWAS   74 (112)
T ss_dssp             EEEEECCCTTSCSSEEEEECTTSCEEEEET-----TEEEEEC
T ss_pred             cEEEEccCccCCCCcEEEEeccccEEEEec-----CCeEEEE
Confidence            479999875544567899999999999863     3467766

>d1nd4a_ d.144.1.6 (A:) Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) {Bacteria (Klebsiella pneumoniae) [TaxId: 573]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase)
species: Bacteria (Klebsiella pneumoniae) [TaxId: 573]

Probab=91.11  E-value=0.097  Score=44.27  Aligned_cols=31  Identities=19%  Similarity=0.302  Sum_probs=26.0

Q ss_pred             CceeecccccceeEEcCCCCCeEeeeeceEE
Q 045577          249 LEIIHRDHKTSNVLLDAEINPNISDFGPARI  279 (392)
Q Consensus       249 ~~iiHrDlKp~NIll~~~~~~kl~DFGla~~  279 (392)
                      ..++|+|+.|.||+++.+..+.|.||+.+..
T Consensus       175 ~~liHgD~~~~Nvl~~~~~~~~iID~~~~~~  205 (255)
T d1nd4a_         175 LVVTHGDACLPNIMVENGRFSGFIDCGRLGV  205 (255)
T ss_dssp             EEEECSSCCGGGEEEETTEEEEECCCTTCEE
T ss_pred             ceEEeCCCCCcceEEeCCceEEEEEchhccc
Confidence            3589999999999998876677999987654

>d2ppqa1 d.144.1.6 (A:5-320) Homoserine kinase ThrB {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Homoserine kinase ThrB
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=85.46  E-value=0.25  Score=43.25  Aligned_cols=33  Identities=24%  Similarity=0.157  Sum_probs=27.9

Q ss_pred             CCCceeecccccceeEEcCCCCCeEeeeeceEE
Q 045577          247 SRLEIIHRDHKTSNVLLDAEINPNISDFGPARI  279 (392)
Q Consensus       247 ~~~~iiHrDlKp~NIll~~~~~~kl~DFGla~~  279 (392)
                      ...++||+|+.+.|++++.+...-|.||+.+..
T Consensus       181 L~~giIHgDl~~dNvl~~~~~v~gvIDF~~~~~  213 (316)
T d2ppqa1         181 LPAGVIHADLFQDNVFFLGDELSGLIDFYFACN  213 (316)
T ss_dssp             SCEEEECSCCCGGGEEEETTEEEEECCCTTCEE
T ss_pred             cccccccCCcchhhhhcccccceeEeccccccc
Confidence            345899999999999999887778999997753

>d1j7la_ d.144.1.6 (A:) Type IIIa 3',5"-aminoglycoside phosphotransferase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Type IIIa 3',5"-aminoglycoside phosphotransferase
species: Enterococcus faecalis [TaxId: 1351]

Probab=81.51  E-value=0.42  Score=40.20  Aligned_cols=30  Identities=20%  Similarity=0.247  Sum_probs=25.7

Q ss_pred             ceeecccccceeEEcCCCCCeEeeeeceEE
Q 045577          250 EIIHRDHKTSNVLLDAEINPNISDFGPARI  279 (392)
Q Consensus       250 ~iiHrDlKp~NIll~~~~~~kl~DFGla~~  279 (392)
                      .++|+|+.|.||+++++....|.||+.+..
T Consensus       184 ~l~HgD~~~~Nil~~~~~~~~lIDwe~a~~  213 (263)
T d1j7la_         184 VFSHGDLGDSNIFVKDGKVSGFIDLGRSGR  213 (263)
T ss_dssp             EEECSCCCTTSEEEETTEEEEECCCTTCEE
T ss_pred             EEEEeeccCcceeecCCceEEEeechhccc
Confidence            589999999999999876667999987754