BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 045579
(104 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9C919|ATL19_ARATH Putative RING-H2 finger protein ATL19 OS=Arabidopsis thaliana
GN=ATL19 PE=3 SV=1
Length = 178
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 50/80 (62%), Gaps = 6/80 (7%)
Query: 22 GERQGLGDEALEQLMPCV------NYSDQEMTPSSNYCVICLENFVDGESCRLFPVCYRI 75
G+++GL +E L+P + + D+E + S C ICL +V E CR+FPVC I
Sbjct: 93 GKKRGLKQSVIETLLPKLLVGQGNHEEDEEKSLESRECAICLSGYVVNEECRVFPVCRHI 152
Query: 76 FHSVCIDQWLKEHLTCPVCR 95
+H++CID WLK HLTCP CR
Sbjct: 153 YHALCIDAWLKNHLTCPTCR 172
>sp|Q94BY6|ATL75_ARATH RING-H2 finger protein ATL75 OS=Arabidopsis thaliana GN=ATL75 PE=2
SV=1
Length = 226
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 34/72 (47%), Positives = 47/72 (65%), Gaps = 2/72 (2%)
Query: 25 QGLGDEALEQLMPCVNYSDQEMTPS-SNYCVICLENFVDGESCRLFPVCYRIFHSVCIDQ 83
+G+ +AL ++ P V+YS + P CVICL +FV GE R+ P C+ FH CID+
Sbjct: 108 KGINKKAL-RMFPVVSYSPEMNLPGLGEECVICLSDFVSGEQIRMLPKCHHGFHVRCIDK 166
Query: 84 WLKEHLTCPVCR 95
WL++HLTCP CR
Sbjct: 167 WLQQHLTCPKCR 178
>sp|P0C034|ATL10_ARATH RING-H2 finger protein ATL10 OS=Arabidopsis thaliana GN=ATL10 PE=2
SV=1
Length = 251
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 35/72 (48%), Positives = 47/72 (65%), Gaps = 2/72 (2%)
Query: 25 QGLGDEALEQLMPCVNYSDQEMTPSSNY-CVICLENFVDGESCRLFPVCYRIFHSVCIDQ 83
+G+ +AL ++ P V+YS + P + CVICL +FV GE RL P C FH CID+
Sbjct: 107 KGIKKKAL-RMFPVVSYSPEMNLPGLDEECVICLSDFVSGEQLRLLPKCNHGFHVRCIDK 165
Query: 84 WLKEHLTCPVCR 95
WL++HLTCP CR
Sbjct: 166 WLQQHLTCPKCR 177
>sp|Q9LS99|ATL77_ARATH RING-H2 finger protein ATL77 OS=Arabidopsis thaliana GN=ATL77 PE=2
SV=1
Length = 220
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 48/77 (62%), Gaps = 2/77 (2%)
Query: 25 QGLGDEALEQLMPCVNYSDQEMTPS-SNYCVICLENFVDGESCRLFPVCYRIFHSVCIDQ 83
+G+ +AL +++P VNYS + P CVICL +FV GE R+ P C FH CID+
Sbjct: 102 KGIKKKAL-KMLPVVNYSPEINLPGVGEECVICLSDFVAGEQLRVLPKCNHGFHLRCIDK 160
Query: 84 WLKEHLTCPVCRISCID 100
WL +H+TCP CR +D
Sbjct: 161 WLTQHMTCPKCRHCLVD 177
>sp|Q8RXX9|ATL6_ARATH E3 ubiquitin-protein ligase ATL6 OS=Arabidopsis thaliana GN=ATL6
PE=1 SV=2
Length = 398
Score = 70.5 bits (171), Expect = 3e-12, Method: Composition-based stats.
Identities = 31/70 (44%), Positives = 40/70 (57%), Gaps = 3/70 (4%)
Query: 29 DEALEQLMPCVNYSD---QEMTPSSNYCVICLENFVDGESCRLFPVCYRIFHSVCIDQWL 85
D ++ + P YSD Q++ C ICL F D E+ RL P C +FH CID WL
Sbjct: 101 DVSVVETFPTFLYSDVKTQKLGKGELECAICLNEFEDDETLRLLPKCDHVFHPHCIDAWL 160
Query: 86 KEHLTCPVCR 95
+ H+TCPVCR
Sbjct: 161 EAHVTCPVCR 170
>sp|Q6NML0|ATL76_ARATH E3 ubiquitin-protein ligase ATL76 OS=Arabidopsis thaliana GN=ATL76
PE=1 SV=1
Length = 225
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 35/72 (48%), Positives = 45/72 (62%), Gaps = 2/72 (2%)
Query: 25 QGLGDEALEQLMPCVNYSDQEMTPS-SNYCVICLENFVDGESCRLFPVCYRIFHSVCIDQ 83
+G+ +AL ++ P V+YS + P CVICL +FV GE RL P C FH CID+
Sbjct: 107 KGIKKKAL-RMFPVVSYSREMNLPGIGEECVICLSDFVSGEQLRLLPKCNHGFHVRCIDK 165
Query: 84 WLKEHLTCPVCR 95
WL+ HLTCP CR
Sbjct: 166 WLQHHLTCPKCR 177
>sp|Q9LZV8|ATL74_ARATH RING-H2 finger protein ATL74 OS=Arabidopsis thaliana GN=ATL74 PE=2
SV=1
Length = 159
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 43/81 (53%), Gaps = 1/81 (1%)
Query: 21 VGERQGLGDEALEQLMPCVNYSDQEMTPSSNYCVICLENFVDGESCRLFPVCYRIFHSVC 80
V +R GL L++ P Y E+ ++ C ICL F DGE R+ P C FH C
Sbjct: 74 VADRAGLKKRELKKF-PVAEYGSGEVKIAATECAICLGEFADGERVRVLPPCNHSFHMSC 132
Query: 81 IDQWLKEHLTCPVCRISCIDI 101
ID WL H +CP CR S I++
Sbjct: 133 IDTWLVSHSSCPNCRHSLIEV 153
>sp|Q8LGA5|ATL31_ARATH E3 ubiquitin-protein ligase ATL31 OS=Arabidopsis thaliana GN=ATL31
PE=1 SV=2
Length = 368
Score = 67.4 bits (163), Expect = 3e-11, Method: Composition-based stats.
Identities = 32/74 (43%), Positives = 42/74 (56%), Gaps = 4/74 (5%)
Query: 25 QGLGDEALEQLMPCVNYSD---QEMTPSSNYCVICLENFVDGESCRLFPVCYRIFHSVCI 81
+GL E +E P YS+ Q++ + C ICL F D E+ RL P C +FH CI
Sbjct: 94 RGLDAETIETF-PTFVYSEVKTQKIGKGALECAICLNEFEDDETLRLLPKCDHVFHPHCI 152
Query: 82 DQWLKEHLTCPVCR 95
WL+ H+TCPVCR
Sbjct: 153 GAWLQGHVTCPVCR 166
>sp|Q9FLC6|ATL73_ARATH RING-H2 finger protein ATL73 OS=Arabidopsis thaliana GN=ATL73 PE=2
SV=1
Length = 176
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 54/92 (58%), Gaps = 4/92 (4%)
Query: 9 NPDRDVNDSDLEVGERQGLGDEALEQLMPCVNYSDQEMTPSSNYCVICLENFVDGESCRL 68
P+ D D++ V +G+ AL +++P +YS E+ + C+ICL +FV+GE+ R+
Sbjct: 73 TPNEDPVDTNANVA--KGIKKRAL-KVIPVDSYS-PELKMKATECLICLGDFVEGETVRV 128
Query: 69 FPVCYRIFHSVCIDQWLKEHLTCPVCRISCID 100
P C FH CID WL H +CP CR S ++
Sbjct: 129 LPKCNHGFHVKCIDTWLLSHSSCPTCRQSLLE 160
>sp|Q8W571|ATL32_ARATH RING-H2 finger protein ATL32 OS=Arabidopsis thaliana GN=ATL32 PE=2
SV=3
Length = 323
Score = 65.1 bits (157), Expect = 1e-10, Method: Composition-based stats.
Identities = 31/75 (41%), Positives = 40/75 (53%), Gaps = 3/75 (4%)
Query: 24 RQGLGDEALEQLMPCVNYS---DQEMTPSSNYCVICLENFVDGESCRLFPVCYRIFHSVC 80
R+G D A+ + P YS + ++ C ICL D E+ RL P+C +FH C
Sbjct: 92 RRGGLDNAVVESFPVFAYSSVKESKIGSKDLECAICLNELEDHETVRLLPICNHLFHIDC 151
Query: 81 IDQWLKEHLTCPVCR 95
ID WL H TCPVCR
Sbjct: 152 IDTWLYSHATCPVCR 166
>sp|Q9SL78|ATL12_ARATH Putative RING-H2 finger protein ATL12 OS=Arabidopsis thaliana
GN=ATL12 PE=3 SV=1
Length = 390
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 39/70 (55%), Gaps = 1/70 (1%)
Query: 26 GLGDEALEQLMPCVNYSDQEMTPSSNYCVICLENFVDGESCRLFPVCYRIFHSVCIDQWL 85
GL +A+E L P +S + C +CL F D E RL P C FH CIDQWL
Sbjct: 98 GLDKKAIESL-PFFRFSALKGLKQGLECSVCLSKFEDVEILRLLPKCRHAFHIGCIDQWL 156
Query: 86 KEHLTCPVCR 95
++H TCP+CR
Sbjct: 157 EQHATCPLCR 166
>sp|Q8VEM1|GOLI_MOUSE E3 ubiquitin-protein ligase RNF130 OS=Mus musculus GN=Rnf130 PE=2
SV=1
Length = 419
Score = 64.7 bits (156), Expect = 2e-10, Method: Composition-based stats.
Identities = 26/77 (33%), Positives = 44/77 (57%), Gaps = 5/77 (6%)
Query: 27 LGDEALEQLMP----CVNYSDQEMTPSSNYCVICLENFVDGESCRLFPVCYRIFHSVCID 82
LGD A + + V D+E P ++C +C+E++ + R+ P C +FH C+D
Sbjct: 234 LGDAAKKAISKLTTRTVKKGDKETDPDFDHCAVCIESYKQNDVVRVLP-CKHVFHKSCVD 292
Query: 83 QWLKEHLTCPVCRISCI 99
WL EH TCP+C+++ +
Sbjct: 293 PWLSEHCTCPMCKLNIL 309
>sp|Q86XS8|GOLI_HUMAN E3 ubiquitin-protein ligase RNF130 OS=Homo sapiens GN=RNF130 PE=1
SV=1
Length = 419
Score = 64.3 bits (155), Expect = 2e-10, Method: Composition-based stats.
Identities = 22/61 (36%), Positives = 38/61 (62%), Gaps = 1/61 (1%)
Query: 39 VNYSDQEMTPSSNYCVICLENFVDGESCRLFPVCYRIFHSVCIDQWLKEHLTCPVCRISC 98
V D+E P ++C +C+E++ + R+ P C +FH C+D WL EH TCP+C+++
Sbjct: 250 VKKGDKETDPDFDHCAVCIESYKQNDVVRILP-CKHVFHKSCVDPWLSEHCTCPMCKLNI 308
Query: 99 I 99
+
Sbjct: 309 L 309
>sp|Q6Y290|GOLI_RAT E3 ubiquitin-protein ligase RNF130 OS=Rattus norvegicus GN=Rnf130
PE=1 SV=1
Length = 419
Score = 64.3 bits (155), Expect = 2e-10, Method: Composition-based stats.
Identities = 22/61 (36%), Positives = 38/61 (62%), Gaps = 1/61 (1%)
Query: 39 VNYSDQEMTPSSNYCVICLENFVDGESCRLFPVCYRIFHSVCIDQWLKEHLTCPVCRISC 98
V D+E P ++C +C+E++ + R+ P C +FH C+D WL EH TCP+C+++
Sbjct: 250 VKKGDKETDPDFDHCAVCIESYKQNDVVRVLP-CKHVFHKSCVDPWLSEHCTCPMCKLNI 308
Query: 99 I 99
+
Sbjct: 309 L 309
>sp|Q8LBA0|NIPL2_ARATH NEP1-interacting protein-like 2 OS=Arabidopsis thaliana GN=ATL24
PE=1 SV=2
Length = 223
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 44/78 (56%), Gaps = 1/78 (1%)
Query: 23 ERQGLGDEALEQLMPCVNYSDQEMTPSSNYCVICLENFVDGESCRLFPVCYRIFHSVCID 82
E +GL ++L +L PC S + + +C ICL++ GE R P C FH VC+D
Sbjct: 147 EARGLSGDSLRKL-PCYIMSSEMVRRQVTHCTICLQDIKTGEITRSLPKCDHTFHLVCVD 205
Query: 83 QWLKEHLTCPVCRISCID 100
+WL H +CP+CR + D
Sbjct: 206 KWLIRHGSCPICRQAVKD 223
>sp|Q7XLY8|ATL41_ORYSJ E3 ubiquitin-protein ligase Os04g0590900 OS=Oryza sativa subsp.
japonica GN=Os04g0590900 PE=2 SV=2
Length = 383
Score = 63.2 bits (152), Expect = 5e-10, Method: Composition-based stats.
Identities = 29/67 (43%), Positives = 34/67 (50%)
Query: 29 DEALEQLMPCVNYSDQEMTPSSNYCVICLENFVDGESCRLFPVCYRIFHSVCIDQWLKEH 88
DE L + Y + + C +CL F DGES RL P C FH CID WLK H
Sbjct: 133 DETLINKITVCKYRRGDGFVHTTDCSVCLGEFSDGESLRLLPRCSHAFHQQCIDTWLKSH 192
Query: 89 LTCPVCR 95
CP+CR
Sbjct: 193 SNCPLCR 199
>sp|Q5XF85|ATL42_ARATH E3 ubiquitin-protein ligase ATL42 OS=Arabidopsis thaliana GN=ATL42
PE=1 SV=2
Length = 432
Score = 62.8 bits (151), Expect = 6e-10, Method: Composition-based stats.
Identities = 30/70 (42%), Positives = 38/70 (54%), Gaps = 1/70 (1%)
Query: 26 GLGDEALEQLMPCVNYSDQEMTPSSNYCVICLENFVDGESCRLFPVCYRIFHSVCIDQWL 85
GL A+E L P +S + + C +CL F E RL P C FH CIDQWL
Sbjct: 97 GLDKTAIESL-PLFRFSALKGSKQGLDCSVCLSKFESVEILRLLPKCRHAFHIGCIDQWL 155
Query: 86 KEHLTCPVCR 95
++H TCP+CR
Sbjct: 156 EQHATCPLCR 165
>sp|Q8NC42|RN149_HUMAN E3 ubiquitin-protein ligase RNF149 OS=Homo sapiens GN=RNF149 PE=2
SV=2
Length = 400
Score = 62.0 bits (149), Expect = 1e-09, Method: Composition-based stats.
Identities = 25/70 (35%), Positives = 40/70 (57%), Gaps = 1/70 (1%)
Query: 35 LMPCVNYSDQEMTPSSNYCVICLENFVDGESCRLFPVCYRIFHSVCIDQWLKEHLTCPVC 94
L+ V + ++ + + C +C+ENF + R+ P C IFH +CID WL +H TCP+C
Sbjct: 251 LLHTVKHGEKGIDVDAENCAVCIENFKVKDIIRILP-CKHIFHRICIDPWLLDHRTCPMC 309
Query: 95 RISCIDIENY 104
++ I Y
Sbjct: 310 KLDVIKALGY 319
>sp|Q84W40|ATL11_ARATH RING-H2 finger protein ATL11 OS=Arabidopsis thaliana GN=ATL11 PE=2
SV=2
Length = 404
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 44/87 (50%), Gaps = 4/87 (4%)
Query: 19 LEVGERQGLG-DEALEQLMPCVNYSDQE---MTPSSNYCVICLENFVDGESCRLFPVCYR 74
L +Q G D ++ + P YS + + + C +CL F D E+ RL P C
Sbjct: 106 LATNRQQARGLDASIIETFPTFQYSTVKTLRIGKEALECSVCLNEFEDDETLRLIPKCCH 165
Query: 75 IFHSVCIDQWLKEHLTCPVCRISCIDI 101
+FH CID WL+ H TCP+CR I +
Sbjct: 166 VFHPGCIDAWLRSHTTCPLCRADLIPV 192
>sp|Q3U2C5|RN149_MOUSE E3 ubiquitin-protein ligase RNF149 OS=Mus musculus GN=Rnf149 PE=2
SV=3
Length = 394
Score = 60.8 bits (146), Expect = 2e-09, Method: Composition-based stats.
Identities = 24/66 (36%), Positives = 38/66 (57%), Gaps = 1/66 (1%)
Query: 39 VNYSDQEMTPSSNYCVICLENFVDGESCRLFPVCYRIFHSVCIDQWLKEHLTCPVCRISC 98
V + ++ + + C +C+ENF + R+ P C IFH +CID WL +H TCP+C++
Sbjct: 251 VKHGEKGIDVDAENCAVCIENFKVKDVIRILP-CKHIFHRICIDPWLLDHRTCPMCKLDV 309
Query: 99 IDIENY 104
I Y
Sbjct: 310 IKALGY 315
>sp|Q9SJJ7|ATL57_ARATH RING-H2 finger protein ATL57 OS=Arabidopsis thaliana GN=ATL57 PE=2
SV=1
Length = 237
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 44/72 (61%), Gaps = 2/72 (2%)
Query: 24 RQGLGDEALEQLMPCVNYSDQEMTPSSNYCVICLENFVDGESCRLFPVCYRIFHSVCIDQ 83
R+GL +A+ L P Y+ + + CVICL +F +GE+ ++ P C +FH C+D
Sbjct: 113 RRGLDSQAVRSL-PVYRYTKAAKQRNED-CVICLSDFEEGETVKVIPHCGHVFHVDCVDT 170
Query: 84 WLKEHLTCPVCR 95
WL ++TCP+CR
Sbjct: 171 WLSSYVTCPLCR 182
>sp|Q9SK92|ATL15_ARATH E3 ubiquitin-protein ligase ATL15 OS=Arabidopsis thaliana GN=ATL15
PE=1 SV=1
Length = 381
Score = 60.8 bits (146), Expect = 2e-09, Method: Composition-based stats.
Identities = 22/49 (44%), Positives = 30/49 (61%)
Query: 53 CVICLENFVDGESCRLFPVCYRIFHSVCIDQWLKEHLTCPVCRISCIDI 101
C +CL F D E+ RL P C +FH CID WL+ TCP+CR + + +
Sbjct: 118 CPVCLNEFEDDETLRLIPQCCHVFHPGCIDAWLRSQTTCPLCRANLVPV 166
>sp|Q9SG96|ATL72_ARATH RING-H2 finger protein ATL72 OS=Arabidopsis thaliana GN=ATL72 PE=2
SV=1
Length = 181
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 41/80 (51%), Gaps = 1/80 (1%)
Query: 20 EVGERQGLGDEALEQLMPCVNYSDQEMTPSSNYCVICLENFVDGESCRLFPVCYRIFHSV 79
+ GL +AL+Q+ P Y + + C+ICL +F DGE R+ P C FH
Sbjct: 82 RLAAATGLKKQALKQI-PVGLYGSGIIDMKATECLICLGDFEDGEKVRVLPKCNHGFHVR 140
Query: 80 CIDQWLKEHLTCPVCRISCI 99
CID WL +CP CR S +
Sbjct: 141 CIDTWLLSRSSCPTCRQSLL 160
>sp|Q9LRB7|EL5_ORYSJ E3 ubiquitin-protein ligase EL5 OS=Oryza sativa subsp. japonica
GN=EL5.1 PE=1 SV=1
Length = 325
Score = 60.5 bits (145), Expect = 3e-09, Method: Composition-based stats.
Identities = 21/45 (46%), Positives = 27/45 (60%)
Query: 53 CVICLENFVDGESCRLFPVCYRIFHSVCIDQWLKEHLTCPVCRIS 97
C +CL DGE R P C FH+ C+D WL H TCP+CR++
Sbjct: 134 CAVCLAELEDGEEARFLPRCGHGFHAECVDMWLGSHSTCPLCRLT 178
>sp|Q9FKX5|NIPL1_ARATH NEP1-interacting protein-like 1 OS=Arabidopsis thaliana GN=ATL27
PE=2 SV=1
Length = 221
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 50/83 (60%), Gaps = 7/83 (8%)
Query: 13 DVNDSDLEVGERQGLGDEALEQLMPCVNYSDQEMTPSSNYCVICLENFVDGESCRLFPVC 72
D+ D+ + +GL ++L ++ P V +D +P C +CL++F GE+ R P C
Sbjct: 143 DIFDTAIS----KGLTGDSLNRI-PKVRITDT--SPEIVSCSVCLQDFQVGETVRSLPHC 195
Query: 73 YRIFHSVCIDQWLKEHLTCPVCR 95
+ +FH CID+WL+ H +CP+CR
Sbjct: 196 HHMFHLPCIDKWLRRHASCPLCR 218
>sp|O22755|ATL44_ARATH RING-H2 finger protein ATL44 OS=Arabidopsis thaliana GN=ATL44 PE=2
SV=1
Length = 185
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 41/78 (52%), Gaps = 8/78 (10%)
Query: 25 QGLGDEALEQLMPCVNYSDQEMTPS-------SNYCVICLENFVDGESCRLFPVCYRIFH 77
+GL +AL+ L P ++ E T S C ICL +F DGE R+ P+C FH
Sbjct: 68 KGLKKKALQSL-PRSTFTAAESTSGAAAEEGDSTECAICLTDFADGEEIRVLPLCGHSFH 126
Query: 78 SVCIDQWLKEHLTCPVCR 95
CID+WL +CP CR
Sbjct: 127 VECIDKWLVSRSSCPSCR 144
>sp|Q8GT74|NIP2_ARATH NEP1-interacting protein 2 OS=Arabidopsis thaliana GN=NIP2 PE=1
SV=1
Length = 241
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 50/85 (58%), Gaps = 2/85 (2%)
Query: 13 DVNDSDLEVGERQGLGDEALEQL--MPCVNYSDQEMTPSSNYCVICLENFVDGESCRLFP 70
D + S + G +GL + +E++ M ++ + + +++ C +CL++F GE+ R P
Sbjct: 154 DDHTSLFDTGGSKGLTGDLVEKIPKMTITGNNNTDASENTDSCSVCLQDFQLGETVRSLP 213
Query: 71 VCYRIFHSVCIDQWLKEHLTCPVCR 95
C+ +FH CID WL H +CP+CR
Sbjct: 214 HCHHMFHLPCIDNWLLRHGSCPMCR 238
>sp|Q9SRQ8|ATL51_ARATH RING-H2 finger protein ATL51 OS=Arabidopsis thaliana GN=ATL51 PE=2
SV=2
Length = 356
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 36/67 (53%)
Query: 29 DEALEQLMPCVNYSDQEMTPSSNYCVICLENFVDGESCRLFPVCYRIFHSVCIDQWLKEH 88
DE+L + + Y + S+ C +CL F + ES RL P C FH CID WLK H
Sbjct: 135 DESLIKSITVYKYRKMDGFVESSDCSVCLSEFQENESLRLLPKCNHAFHVPCIDTWLKSH 194
Query: 89 LTCPVCR 95
CP+CR
Sbjct: 195 SNCPLCR 201
>sp|Q9FG21|ATL71_ARATH Putative RING-H2 finger protein ATL71 OS=Arabidopsis thaliana
GN=ATL71 PE=3 SV=1
Length = 197
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 54/93 (58%), Gaps = 6/93 (6%)
Query: 11 DRDVNDSDLEVGERQGLGDEALEQL--MPC----VNYSDQEMTPSSNYCVICLENFVDGE 64
D + ++SD V E GL +E ++ +P V+YS Q+ + +++ C ICL ++ +
Sbjct: 81 DFEDDESDTVVVEVLGLTEEVIKGFPKLPYEEARVSYSLQKESSTTSCCSICLADYKKMD 140
Query: 65 SCRLFPVCYRIFHSVCIDQWLKEHLTCPVCRIS 97
R+ P C +FH C+D WL+ H TCPVCR S
Sbjct: 141 MIRVLPDCNHLFHDNCVDPWLRLHPTCPVCRTS 173
>sp|O64763|ATL9_ARATH E3 ubiquitin-protein ligase ATL9 OS=Arabidopsis thaliana GN=ATL9
PE=1 SV=1
Length = 378
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 43/78 (55%), Gaps = 4/78 (5%)
Query: 25 QGLGDEALEQLMPCVNYSDQE---MTPSSNYCVICLENFVDGESCRLFPVCYRIFHSVCI 81
+GL EA+E P YS+ + + C +CL F D E+ RL P C +FH+ C+
Sbjct: 105 RGLDAEAIETF-PTFLYSEVKAVRIGKGGVECAVCLCEFEDDETLRLMPPCCHVFHADCV 163
Query: 82 DQWLKEHLTCPVCRISCI 99
D WL EH TCP+CR +
Sbjct: 164 DVWLSEHSTCPLCRADLV 181
>sp|Q67YI6|ATL65_ARATH RING-H2 finger protein ATL65 OS=Arabidopsis thaliana GN=ATL65 PE=2
SV=2
Length = 411
Score = 59.7 bits (143), Expect = 6e-09, Method: Composition-based stats.
Identities = 20/47 (42%), Positives = 30/47 (63%)
Query: 53 CVICLENFVDGESCRLFPVCYRIFHSVCIDQWLKEHLTCPVCRISCI 99
C +CL F +G+ R P+C+ FH CID+WL+ H CP+CR + +
Sbjct: 156 CAVCLLEFEEGDYVRTLPLCFHAFHLECIDEWLRSHPNCPLCRTAIL 202
>sp|Q6NRX0|RN149_XENLA E3 ubiquitin-protein ligase RNF149 OS=Xenopus laevis GN=rnf149 PE=2
SV=1
Length = 397
Score = 59.3 bits (142), Expect = 7e-09, Method: Composition-based stats.
Identities = 22/47 (46%), Positives = 31/47 (65%), Gaps = 1/47 (2%)
Query: 53 CVICLENFVDGESCRLFPVCYRIFHSVCIDQWLKEHLTCPVCRISCI 99
C +C+EN+ + R+ P C IFH +CID WL EH TCP+C++ I
Sbjct: 264 CAVCIENYKTKDLVRILP-CKHIFHRLCIDPWLIEHRTCPMCKLDVI 309
>sp|Q7X843|ATL48_ARATH RING-H2 finger protein ATL48 OS=Arabidopsis thaliana GN=ATL48 PE=2
SV=2
Length = 349
Score = 59.3 bits (142), Expect = 7e-09, Method: Composition-based stats.
Identities = 34/96 (35%), Positives = 48/96 (50%), Gaps = 6/96 (6%)
Query: 7 NHNPDRDVNDSDLEVGERQGLGDEALEQL----MPCVNYSDQEMTPSSNY-CVICLENFV 61
N+NPD + S ++ L D L+Q +P Y + ++ + C +CL F
Sbjct: 157 NYNPDL-FSFSSPQLQHLFFLHDSGLDQTAIDALPVFLYGNVTISLEQPFDCAVCLNEFS 215
Query: 62 DGESCRLFPVCYRIFHSVCIDQWLKEHLTCPVCRIS 97
D + RL PVC FH CID WL + TCP+CR S
Sbjct: 216 DTDKLRLLPVCSHAFHLHCIDTWLLSNSTCPLCRRS 251
>sp|Q9ZT49|ATL45_ARATH RING-H2 finger protein ATL45 OS=Arabidopsis thaliana GN=ATL45 PE=2
SV=1
Length = 200
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Query: 36 MPCVNYSDQEMTPSSNYCVICLENFVDGESCRLFPVCYRIFHSVCIDQWLKEHLTCPVCR 95
+PC + D + SS C IC+ F +GE R+ P+C FH CID+WL +CP CR
Sbjct: 99 LPCSSVGDGD---SSTECAICITEFSEGEEIRILPLCSHAFHVACIDKWLTSRSSCPSCR 155
>sp|P0C041|ATL53_ARATH Putative RING-H2 finger protein ATL53 OS=Arabidopsis thaliana
GN=ATL53 PE=3 SV=2
Length = 310
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 26/47 (55%), Positives = 29/47 (61%)
Query: 53 CVICLENFVDGESCRLFPVCYRIFHSVCIDQWLKEHLTCPVCRISCI 99
C ICL F + ES RL P C FH VCID+WLK H CP+CR I
Sbjct: 155 CSICLGEFNEDESLRLLPKCNHTFHVVCIDRWLKSHSNCPLCRAKII 201
>sp|Q6NKR1|ATL28_ARATH RING-H2 finger protein ATL28 OS=Arabidopsis thaliana GN=ATL28 PE=2
SV=1
Length = 254
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Query: 23 ERQGLGDEALEQLMPCVNYSDQEMTPSSNYCVICLENFVDGESCRLFPVCYRIFHSVCID 82
E GL D + + P +YS C ICL F D ++ RL VC FHS CID
Sbjct: 74 ENTGL-DPFIIRSFPVFHYSSATKKNHGTECAICLSEFSDEDTVRLITVCRHPFHSNCID 132
Query: 83 QWLKEHLTCPVCR 95
W + H TCPVCR
Sbjct: 133 LWFELHKTCPVCR 145
>sp|Q9LF64|ATL52_ARATH RING-H2 finger protein ATL52 OS=Arabidopsis thaliana GN=ATL52 PE=2
SV=1
Length = 362
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 46/99 (46%), Gaps = 1/99 (1%)
Query: 5 NHNHNPDRDVNDSDLEVGERQGLGDEALEQLMPCVNYSDQEMTPSSNYCVICLENFVDGE 64
N NHN + + + GL +E++ + + Y + + C +CL F + E
Sbjct: 95 NLNHNGEGFFSSTQRISTNGDGL-NESMIKSITVYKYKSGDGFVDGSDCSVCLSEFEENE 153
Query: 65 SCRLFPVCYRIFHSVCIDQWLKEHLTCPVCRISCIDIEN 103
S RL P C FH CID WLK H CP+CR + N
Sbjct: 154 SLRLLPKCNHAFHLPCIDTWLKSHSNCPLCRAFVTGVNN 192
>sp|Q9M0R6|ATL35_ARATH Putative RING-H2 finger protein ATL35 OS=Arabidopsis thaliana
GN=ATL35 PE=3 SV=1
Length = 302
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 38/75 (50%), Gaps = 4/75 (5%)
Query: 24 RQGLGDEALEQLMPCVNYSD---QEMTPSSNYCVICLENFVDGESCRLFPVCYRIFHSVC 80
R+GL E +E P YS+ ++ C ICL FVD E+ R P C FH+ C
Sbjct: 92 RRGLEKELVESF-PIFLYSEVKGLKIGKGGVECAICLSEFVDKETLRWMPPCSHTFHANC 150
Query: 81 IDQWLKEHLTCPVCR 95
ID WL TCP CR
Sbjct: 151 IDVWLSSQSTCPACR 165
>sp|Q8H7N9|ATL31_ORYSJ E3 ubiquitin-protein ligase Os03g0188200 OS=Oryza sativa subsp.
japonica GN=Os03g0188200 PE=2 SV=1
Length = 353
Score = 58.5 bits (140), Expect = 1e-08, Method: Composition-based stats.
Identities = 26/71 (36%), Positives = 35/71 (49%), Gaps = 4/71 (5%)
Query: 29 DEALEQLMPCVNYSD--QEMTPSSN--YCVICLENFVDGESCRLFPVCYRIFHSVCIDQW 84
D+ + + P Y D M S C +CL F D + R+ P C +FH CID W
Sbjct: 105 DKEVVEAFPTAVYGDVKARMAAKSGPLECAVCLAEFADSDELRVLPACCHVFHPDCIDPW 164
Query: 85 LKEHLTCPVCR 95
L +TCP+CR
Sbjct: 165 LAAAVTCPLCR 175
>sp|A5WWA0|ZNRF3_DANRE E3 ubiquitin-protein ligase ZNRF3 OS=Danio rerio GN=znrf3 PE=3 SV=2
Length = 868
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 32/48 (66%), Gaps = 1/48 (2%)
Query: 53 CVICLENFVDGESCRLFPVCYRIFHSVCIDQWLKEHLTCPVCRISCID 100
C ICLE ++DGE R+ P +R FH C+D WL +H TCP CR + ID
Sbjct: 267 CAICLEKYIDGEELRVIPCAHR-FHKKCVDPWLLQHHTCPHCRHNIID 313
>sp|Q9ULT6|ZNRF3_HUMAN E3 ubiquitin-protein ligase ZNRF3 OS=Homo sapiens GN=ZNRF3 PE=1
SV=3
Length = 936
Score = 58.2 bits (139), Expect = 2e-08, Method: Composition-based stats.
Identities = 24/48 (50%), Positives = 32/48 (66%), Gaps = 1/48 (2%)
Query: 53 CVICLENFVDGESCRLFPVCYRIFHSVCIDQWLKEHLTCPVCRISCID 100
C ICLE ++DGE R+ P +R FH C+D WL +H TCP CR + I+
Sbjct: 293 CAICLEKYIDGEELRVIPCTHR-FHRKCVDPWLLQHHTCPHCRHNIIE 339
>sp|Q9C7I1|ATL34_ARATH RING-H2 finger protein ATL34 OS=Arabidopsis thaliana GN=ATL34 PE=2
SV=1
Length = 327
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 38/76 (50%), Gaps = 4/76 (5%)
Query: 25 QGLGDEALEQLMPCVNYSD---QEMTPSSNYCVICLENFVDGESCRLFPVCYRIFHSVCI 81
+GLG + + P YS ++ C ICL F D E+ RL P C FH+ CI
Sbjct: 98 RGLGKDVINSF-PSFLYSQVKGLKIGKGGVECAICLNEFEDEETLRLMPPCSHAFHASCI 156
Query: 82 DQWLKEHLTCPVCRIS 97
D WL TCPVCR S
Sbjct: 157 DVWLSSRSTCPVCRAS 172
>sp|Q9LQM2|ATL81_ARATH RING-H2 finger protein ATL81 OS=Arabidopsis thaliana GN=ATL81 PE=2
SV=1
Length = 332
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 48/94 (51%), Gaps = 8/94 (8%)
Query: 2 RNRNHNHNPDRDVNDSDLEVGERQGLGDEALEQLMPCVNYSDQEMTPSSNYCVICLENFV 61
RNRN N + N E GL + +E P YS ++ ++ C ICL F+
Sbjct: 111 RNRNRPSNLIQPSNPP-----ENLGLDSKIIESF-PEYPYSVKDH--GTDQCSICLTEFM 162
Query: 62 DGESCRLFPVCYRIFHSVCIDQWLKEHLTCPVCR 95
D ++ RL C FH++CID W + H TCPVCR
Sbjct: 163 DDDTIRLISTCNHSFHTICIDLWFEGHKTCPVCR 196
>sp|P0C035|ATL60_ARATH RING-H2 finger protein ATL60 OS=Arabidopsis thaliana GN=ATL60 PE=2
SV=1
Length = 310
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 31/51 (60%)
Query: 53 CVICLENFVDGESCRLFPVCYRIFHSVCIDQWLKEHLTCPVCRISCIDIEN 103
C +CL + VDG+ R+ P C FH CID W + H TCP+CR + +E+
Sbjct: 120 CAVCLSDLVDGDKARVLPRCNHGFHVDCIDMWFQSHSTCPLCRNTVGSVED 170
>sp|Q9M0R7|ATL39_ARATH RING-H2 finger protein ATL39 OS=Arabidopsis thaliana GN=ATL39 PE=2
SV=1
Length = 132
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 40/77 (51%), Gaps = 2/77 (2%)
Query: 25 QGLGDEALEQLMPCVNYSDQEMTPSSNY--CVICLENFVDGESCRLFPVCYRIFHSVCID 82
+GL EA++ V + + P CV+CL F D E+ RL P C +FH+ C+D
Sbjct: 55 RGLDAEAIKSFPSFVYTEARGIEPGIGELECVVCLNEFKDDETLRLVPPCVHVFHADCVD 114
Query: 83 QWLKEHLTCPVCRISCI 99
WL TCP+CR +
Sbjct: 115 IWLSHSSTCPICRAKVV 131
>sp|Q9D304|RN128_MOUSE E3 ubiquitin-protein ligase RNF128 OS=Mus musculus GN=Rnf128 PE=1
SV=1
Length = 428
Score = 57.0 bits (136), Expect = 3e-08, Method: Composition-based stats.
Identities = 21/53 (39%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
Query: 43 DQEMTPSSNYCVICLENFVDGESCRLFPVCYRIFHSVCIDQWLKEHLTCPVCR 95
D+E+ P + C +C+E + + R+ C IFH C+D WL EH TCP+C+
Sbjct: 267 DKEIGPDGDSCAVCIELYKPNDLVRIL-TCNHIFHKTCVDPWLLEHRTCPMCK 318
>sp|Q5SSZ7|ZNRF3_MOUSE E3 ubiquitin-protein ligase ZNRF3 OS=Mus musculus GN=Znrf3 PE=2
SV=1
Length = 913
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 35/52 (67%), Gaps = 1/52 (1%)
Query: 49 SSNYCVICLENFVDGESCRLFPVCYRIFHSVCIDQWLKEHLTCPVCRISCID 100
S++ C ICLE ++DGE R+ P +R FH C+D WL +H TCP CR + I+
Sbjct: 286 STSDCAICLEKYIDGEELRVIPCTHR-FHRKCVDPWLLQHHTCPHCRHNIIE 336
>sp|Q7L0R7|RNF44_HUMAN RING finger protein 44 OS=Homo sapiens GN=RNF44 PE=2 SV=1
Length = 432
Score = 57.0 bits (136), Expect = 3e-08, Method: Composition-based stats.
Identities = 32/98 (32%), Positives = 49/98 (50%), Gaps = 15/98 (15%)
Query: 11 DRDVNDSDLE-------VGER------QGLGDEALEQLMPCVNYSDQEMTPSSNYCVICL 57
D DV+D ++E + ER +GL +EQL P ++ CV+C
Sbjct: 326 DLDVDDVEMENYEALLNLAERLGDAKPRGLTKADIEQL-PSYRFNPDSHQSEQTLCVVCF 384
Query: 58 ENFVDGESCRLFPVCYRIFHSVCIDQWLKEHLTCPVCR 95
+F + R+ P C FH+ C+D+WLK + TCP+CR
Sbjct: 385 SDFEARQLLRVLP-CNHEFHTKCVDKWLKANRTCPICR 421
>sp|Q6AY01|RN133_RAT E3 ubiquitin-protein ligase RNF133 OS=Rattus norvegicus GN=Rnf133
PE=2 SV=1
Length = 381
Score = 57.0 bits (136), Expect = 3e-08, Method: Composition-based stats.
Identities = 22/53 (41%), Positives = 33/53 (62%), Gaps = 1/53 (1%)
Query: 43 DQEMTPSSNYCVICLENFVDGESCRLFPVCYRIFHSVCIDQWLKEHLTCPVCR 95
D+E++P+++ CVIC E + E R+ C FH CID W+ H TCP+C+
Sbjct: 246 DEEVSPNADSCVICFEAYKPNEIVRIL-TCKHFFHKNCIDPWILAHGTCPMCK 297
>sp|Q6NQG7|ATL78_ARATH RING-H2 finger protein ATL78 OS=Arabidopsis thaliana GN=ATL78 PE=2
SV=1
Length = 219
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 39/71 (54%), Gaps = 2/71 (2%)
Query: 26 GLGDEALEQLMPCVNYSDQEMTPSSNY-CVICLENFVDGESCRLFPVCYRIFHSVCIDQW 84
G+ +AL+ V+YS + P + C ICL FV E +L P C+ FH CID+W
Sbjct: 104 GVKRKALKSFQ-TVSYSTELNLPGLDTECAICLSEFVAEERVKLLPTCHHGFHVRCIDKW 162
Query: 85 LKEHLTCPVCR 95
L H +CP CR
Sbjct: 163 LSSHSSCPTCR 173
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.323 0.140 0.464
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 43,888,587
Number of Sequences: 539616
Number of extensions: 1725313
Number of successful extensions: 4286
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 320
Number of HSP's successfully gapped in prelim test: 119
Number of HSP's that attempted gapping in prelim test: 3848
Number of HSP's gapped (non-prelim): 447
length of query: 104
length of database: 191,569,459
effective HSP length: 73
effective length of query: 31
effective length of database: 152,177,491
effective search space: 4717502221
effective search space used: 4717502221
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 55 (25.8 bits)