Query 045589
Match_columns 136
No_of_seqs 126 out of 643
Neff 6.4
Searched_HMMs 29240
Date Mon Mar 25 05:43:52 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/045589.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/045589hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1n10_A PHL P I, pollen allerge 100.0 1.4E-48 4.7E-53 308.9 15.2 134 1-134 40-241 (241)
2 2hcz_X Beta-expansin 1A; domai 100.0 1.1E-48 3.9E-53 310.0 13.1 136 1-136 40-244 (245)
3 3d30_A YOAJ, expansin like pro 100.0 1.5E-39 5.2E-44 252.1 14.8 129 1-136 21-206 (208)
4 3ft1_A PHL P 3 allergen; beta- 99.9 2E-26 6.8E-31 160.4 10.5 71 66-136 3-99 (100)
5 2jnz_A PHL P 3 allergen; timot 99.9 1E-24 3.5E-29 153.5 10.6 69 66-134 14-107 (108)
6 1bmw_A PHL P II, pollen allerg 99.9 1E-23 3.6E-28 145.7 -2.8 67 66-134 3-95 (96)
7 1wc2_A Endoglucanase; hydrolas 99.7 2.5E-19 8.4E-24 135.4 1.4 67 1-68 28-164 (181)
8 1bw3_A Barwin, basic barley SE 98.2 4.5E-07 1.6E-11 64.9 2.1 37 26-62 58-124 (125)
9 3m3g_A EPL1 protein; fungal, p 92.3 0.15 5.3E-06 35.8 4.1 34 27-60 56-114 (120)
10 2kqa_A Cerato-platanin; elicit 91.9 0.22 7.5E-06 35.4 4.5 44 16-60 51-120 (129)
11 3suk_A Cerato-platanin-like pr 90.4 0.41 1.4E-05 33.8 4.7 34 27-60 57-119 (125)
12 3sul_A Cerato-platanin-like pr 89.3 0.47 1.6E-05 33.4 4.3 43 17-60 46-116 (122)
13 3suj_A Cerato-platanin 1; doub 89.0 0.51 1.8E-05 33.4 4.3 34 27-60 56-119 (127)
14 3sum_A Cerato-platanin-like pr 81.0 1.9 6.4E-05 30.9 4.1 35 26-60 55-121 (136)
15 2kct_A Cytochrome C-type bioge 71.3 4.6 0.00016 26.9 3.7 29 102-130 30-62 (94)
16 1sr3_A APO-CCME; OB fold, beta 63.2 7.5 0.00026 27.6 3.7 28 102-129 50-78 (136)
17 1j6q_A Cytochrome C maturation 58.4 11 0.00036 26.8 3.8 28 102-129 54-83 (136)
18 4avr_A PA4485; unknown functio 47.2 24 0.00081 23.5 3.9 21 39-59 74-94 (95)
19 3isy_A Bsupi, intracellular pr 46.3 68 0.0023 21.9 6.4 20 110-129 75-94 (120)
20 2d7n_A Filamin-C; beta-sandwic 43.9 56 0.0019 21.0 5.3 21 51-72 8-29 (93)
21 3fcg_A F1 capsule-anchoring pr 38.7 57 0.002 21.3 4.7 15 102-116 61-75 (90)
22 3nrl_A Uncharacterized protein 33.8 13 0.00046 24.1 0.9 17 21-37 23-40 (81)
23 2kt7_A Putative peptidoglycan 30.9 72 0.0025 21.2 4.3 28 102-134 7-34 (102)
24 2oxg_Z SOXZ protein; immunoglo 28.2 1.3E+02 0.0045 19.9 6.5 17 102-118 86-102 (108)
25 3pe9_A Fibronectin(III)-like m 26.4 1.4E+02 0.0046 19.4 6.0 13 88-100 29-41 (98)
26 2kvz_A ISPE; structural genomi 25.8 74 0.0025 20.5 3.5 31 102-134 8-38 (85)
27 3fip_A Outer membrane usher pr 25.4 1.1E+02 0.0038 25.6 5.4 29 102-130 162-193 (493)
28 2c9r_A COPC, copper resistance 24.9 53 0.0018 21.5 2.7 27 46-72 73-102 (102)
29 1v8h_A Sulfur oxidation protei 24.1 1.6E+02 0.0054 19.4 6.0 18 102-119 85-102 (107)
30 1lyq_A PCOC copper resistance 23.8 57 0.0019 21.5 2.7 27 46-72 75-104 (104)
31 3sbc_A Peroxiredoxin TSA1; alp 22.7 27 0.00092 26.2 1.0 11 119-129 187-197 (216)
32 2qgu_A Probable signal peptide 20.4 1.5E+02 0.0053 21.6 4.8 30 92-121 137-168 (211)
33 3es4_A Uncharacterized protein 20.0 71 0.0024 21.6 2.6 27 104-132 71-101 (116)
No 1
>1n10_A PHL P I, pollen allergen PHL P 1; plant allergen, expansin, immunoglobulin-like fold, PSI beta barrel, structural genomics; HET: NAG; 2.90A {Phleum pratense} SCOP: b.7.3.1 b.52.1.3
Probab=100.00 E-value=1.4e-48 Score=308.88 Aligned_cols=134 Identities=27% Similarity=0.553 Sum_probs=127.0
Q ss_pred CccccCCCCCCCCCceeeEecccccCCCCcccccc-ccc--------------------------------HHHHHhhc-
Q 045589 1 RSFGYGNLYSQGYGTSSAALSTALFNSGVTCGVCL-IKC--------------------------------PIFQHIAH- 46 (136)
Q Consensus 1 GaCGyg~~~~~~~~~~~aA~~~~~f~~g~~CG~C~-v~C--------------------------------~aF~~ia~- 46 (136)
||||||+++..|++.|+||||++||++|++||+|| |+| +||.+||+
T Consensus 40 GACGyg~~~~~~~g~~~aAls~~lf~~G~~CG~CyeV~c~~~~~C~~~~v~V~VtD~C~C~~~~~hfDLS~~AF~~iA~~ 119 (241)
T 1n10_A 40 GACGYKDVDKPPFSGMTGCGNTPIFKSGRGCGSCFEIKCTKPEACSGEPVVVHITDDNEEPIAPYHFDLSGHAFGAMAKK 119 (241)
T ss_dssp CTTCCCCTTSTTTTTCEEEECHHHHGGGTTSSCEEEEEECSSTTBCSCCEEEEEEEECSSCSSSSEEEEEHHHHHTTBST
T ss_pred eeCCCCCcCcCCCCcEEEEeCHHHccCcccCCCeEEEEeCCCCccCCCCEEEEEeEecCCCCCCcceecCHHHHHHhhcc
Confidence 79999999999999999999999999999999999 987 99999999
Q ss_pred ------ccCceEeEEEEEeecccCC--ceEEEEc--cccceEEEEEEeecCCCCeEEEEEeccCc---------------
Q 045589 47 ------YKAGIVPVRYRRVACGKSG--GIRFTIN--GHSYFNLVLITNVGGAGDVLSVSIKGSRT--------------- 101 (136)
Q Consensus 47 ------~~~G~i~i~yrrV~C~~~g--~i~~~v~--~~~~~~~v~v~n~~G~g~I~~Vevk~s~~--------------- 101 (136)
++.|+|+|+||||+|+++| +|+|+|+ |++||++|+|+|++|++||++||||++++
T Consensus 120 g~~~~L~~~Gii~V~yrrV~C~~~gg~~i~f~v~~Gs~~~~~~vlv~n~~g~g~V~~V~ik~~~~~~W~~m~r~wG~~W~ 199 (241)
T 1n10_A 120 GDEQKLRSAGELELQFRRVKCKYPEGTKVTFHVEKGSNPNYLALLVKYVNGDGDVVAVDIKEKGKDKWIELKESWGAIWR 199 (241)
T ss_dssp TCHHHHHTTCSEEEEEEECCCCCCTTCCCEEEECTTCBTTEEEEEEECCCCSSCEEEEEEEETTCCCCEECBCCTTTCEE
T ss_pred CcccccccCCEEEEEEEEEeCCCCCCCceEEEEcCCCCcceEEEEEEecCCCCCEEEEEEEeCCCCCeEECccCcCcEEE
Confidence 6899999999999999994 8999999 69999999999999999999999998642
Q ss_pred ---------eEEEEEEecCCcEEEEcceeCCCCCCCeEEecC
Q 045589 102 ---------ALSFKVTTSDGCLFISINVARPNWSFGQTYNGR 134 (136)
Q Consensus 102 ---------pls~Rvts~~G~~vv~~~viP~~w~~G~tY~s~ 134 (136)
||+||||+++|++|+++||||++|+||+||+++
T Consensus 200 ~~~~~~l~gpls~RvT~~~G~~v~~~nViP~~w~~g~ty~~~ 241 (241)
T 1n10_A 200 IDTPDKLTGPFTVRYTTEGGTKTEAEDVIPEGWKADTSYESK 241 (241)
T ss_dssp EECSSCCCSCEEEEEEESSSCEEEEEEEECSSCCSSEEEEC-
T ss_pred eCCCCCCCCCEEEEEEEeCCcEEEEccccCCCCCCCCEEeCC
Confidence 899999999999999999999999999999974
No 2
>2hcz_X Beta-expansin 1A; domain 1 is A beta barrel and domain 2 is A immunoglobulin L sandwich, allergen; HET: NAG MAN FCA; 2.75A {Zea mays}
Probab=100.00 E-value=1.1e-48 Score=309.99 Aligned_cols=136 Identities=28% Similarity=0.552 Sum_probs=129.6
Q ss_pred CccccCCCCCCCCCceeeEecccccCCCCcccccc-ccc--------------------------------HHHHHhhc-
Q 045589 1 RSFGYGNLYSQGYGTSSAALSTALFNSGVTCGVCL-IKC--------------------------------PIFQHIAH- 46 (136)
Q Consensus 1 GaCGyg~~~~~~~~~~~aA~~~~~f~~g~~CG~C~-v~C--------------------------------~aF~~ia~- 46 (136)
|||||++++..|++.|+||||++||++|++||+|| |+| +||.+||+
T Consensus 40 GACGyg~~~~~p~~~~~aAls~~lf~~G~~CG~Cy~V~c~~~~~C~~~sv~V~VtD~C~C~~~~~hfDLS~~AF~~iA~~ 119 (245)
T 2hcz_X 40 GACGIKNVNLPPYSGMTACGNVPIFKDGKGCGSCYEVRCKEKPECSGNPVTVYITDMNYEPIAPYHFDLSGKAFGSLAKP 119 (245)
T ss_dssp CTTCCCCTTSTTTTTCEEEECHHHHGGGTSTTCEEEEECCSSSSBCSSCEEEEEEEECCCTTSSSEEEECHHHHHHTBCT
T ss_pred ccCCCCCCCcCCCCCEEEEeCHHHcCCchhcCCeEEEEeCCCCccCCCCEEEEEEeccCCCCCCccEEcCHHHHHHHhcc
Confidence 79999999999999999999999999999999999 987 99999999
Q ss_pred ------ccCceEeEEEEEeecccCC--ceEEEEc--cccceEEEEEEeecCCCCeEEEEEeccCc---------------
Q 045589 47 ------YKAGIVPVRYRRVACGKSG--GIRFTIN--GHSYFNLVLITNVGGAGDVLSVSIKGSRT--------------- 101 (136)
Q Consensus 47 ------~~~G~i~i~yrrV~C~~~g--~i~~~v~--~~~~~~~v~v~n~~G~g~I~~Vevk~s~~--------------- 101 (136)
.+.|+|+|+||||+|+++| +|+|+|+ +++||++|+|+|++|+++|++||||++++
T Consensus 120 g~~~~L~~~Gii~V~yrrV~C~~~gg~ni~f~v~~Gs~~~~~avlv~n~~g~g~V~~V~ik~~~~~~W~~m~r~~G~~W~ 199 (245)
T 2hcz_X 120 GLNDKIRHCGIMDVEFRRVRCKYPAGQKIVFHIEKGCNPNYLAVLVKYVADDGDIVLMEIQDKLSAEWKPMKLSWGAIWR 199 (245)
T ss_dssp TCHHHHTTTCCEEEEEEEECCCCSTTCCCEEEECCCCSSSCCCEEEECCCTTCCEEEEEBCCSSSCSCBCCEEEETTEEE
T ss_pred ccccccccCCEEEEEEEEEecCCCCCCcEEEEEcCCCCcceEEEEEEecCCCCCEEEEEEEeCCCCceeECccCCCCEEE
Confidence 6899999999999999984 6999998 69999999999999999999999998642
Q ss_pred ---------eEEEEEEecCCcEEEEcceeCCCCCCCeEEecC-CC
Q 045589 102 ---------ALSFKVTTSDGCLFISINVARPNWSFGQTYNGR-QF 136 (136)
Q Consensus 102 ---------pls~Rvts~~G~~vv~~~viP~~w~~G~tY~s~-qf 136 (136)
||+||||+++|++|+++||||++|++|+||+++ ||
T Consensus 200 ~~~~~~l~gpls~RvT~~~G~~v~~~nViP~~w~~g~ty~~~~qf 244 (245)
T 2hcz_X 200 MDTAKALKGPFSIRLTSESGKKVIAKDVIPANWRPDAVYTSNVQF 244 (245)
T ss_dssp CSCCSSCCSSCCEEEEETTSCEEEESCSCCSSCCTTCEEECSCCC
T ss_pred ECCCCCCCCCEEEEEEEeCCcEEEEeeeecCCCCCCCEEeCcccc
Confidence 799999999999999999999999999999998 98
No 3
>3d30_A YOAJ, expansin like protein; peptidoglycan associated protei unknown function, MLTA, bacteria autolysis, peptidoglycan-B protein; 1.90A {Bacillus subtilis} PDB: 2bh0_A
Probab=100.00 E-value=1.5e-39 Score=252.07 Aligned_cols=129 Identities=19% Similarity=0.283 Sum_probs=120.0
Q ss_pred CccccCCCCCCCCCceeeEecccccCCC----Ccccccc-ccc-------------------------HHHHHhhcccCc
Q 045589 1 RSFGYGNLYSQGYGTSSAALSTALFNSG----VTCGVCL-IKC-------------------------PIFQHIAHYKAG 50 (136)
Q Consensus 1 GaCGyg~~~~~~~~~~~aA~~~~~f~~g----~~CG~C~-v~C-------------------------~aF~~ia~~~~G 50 (136)
|||||+ ..|++.|+||||+++|++| +.||+|| |+| +||.+||+...|
T Consensus 21 GACG~~---~~~~~~~~aAls~~~f~~G~~~~~~CG~c~~v~~~~gsv~V~v~D~CP~C~~~~~DLS~~aF~~la~~~~G 97 (208)
T 3d30_A 21 GAFLLD---PIPSDMEITAINPADLNYGGVKAALAGSYLEVEGPKGKTTVYVTDLYPEGARGALDLSPNAFRKIGNMKDG 97 (208)
T ss_dssp CTTCCC---CCCTTCCEEEECHHHHTGGGCTTTTTTCEEEEEETTEEEEEEEEEECTTCCTTCEEECHHHHHHHSCGGGS
T ss_pred CcCCCC---CCCCCCEEEEeCHHHhCCCCcCccccCCEEEEEeCCCcEEEEEEECCCCCCCCeEECCHHHHHHhcccCCC
Confidence 799986 3467889999999999998 8999999 987 999999999999
Q ss_pred eEeEEEEEeecccCCceEEEEc--cccceEEEEEEeecCCCCeEEEEEeccCc--------------------eEEEEEE
Q 045589 51 IVPVRYRRVACGKSGGIRFTIN--GHSYFNLVLITNVGGAGDVLSVSIKGSRT--------------------ALSFKVT 108 (136)
Q Consensus 51 ~i~i~yrrV~C~~~g~i~~~v~--~~~~~~~v~v~n~~G~g~I~~Vevk~s~~--------------------pls~Rvt 108 (136)
+++|+||||+|+++|+|+|+|+ +|+||++|+|+|++| +|++||||++++ ||+||||
T Consensus 98 ~i~v~~~~V~C~~~G~i~f~v~~Gs~~~~~~v~v~n~~g--~v~~v~i~~~~~W~~m~r~~~n~~~~~~~~~~pls~rvT 175 (208)
T 3d30_A 98 KINIKWRVVKAPITGNFTYRIKEGSSRWWAAIQVRNHKY--PVMKMEYEKDGKWINMEKMDYNHFVSTNLGTGSLKVRMT 175 (208)
T ss_dssp SEEEEEEEECCCCCSCCEEEECTTCSSSEEEEEEESCSS--CEEEEEEEETTEEEEEEECTTSCEEEECCCSSSEEEEEE
T ss_pred EEEEEEEEeCCCCCCceeEEEcCCCCCceEEEEEEecCC--CEEEEEEecCCcEEEccccccceeecCCCCCCCEEEEEE
Confidence 9999999999999999999999 799999999999986 999999997642 9999999
Q ss_pred ecCCcEEEEcceeCCCCCC----CeEEecC-CC
Q 045589 109 TSDGCLFISINVARPNWSF----GQTYNGR-QF 136 (136)
Q Consensus 109 s~~G~~vv~~~viP~~w~~----G~tY~s~-qf 136 (136)
+.+|++| .+|||++|++ |.+|+++ ||
T Consensus 176 ~~~G~~v--~~vip~~w~~~~~~~~~~~~~~Qf 206 (208)
T 3d30_A 176 DIRGKVV--KDTIPKLPESGTSKAYTVPGHVQF 206 (208)
T ss_dssp ETTCCEE--EEEECCCCSSCCSSCEEEECCCCC
T ss_pred ECCCCEE--EEEECCCCccCcccceEEeCcCcc
Confidence 9999999 7999999997 8999998 98
No 4
>3ft1_A PHL P 3 allergen; beta-barrel; 1.79A {Phleum pratense} SCOP: b.7.3.0 PDB: 3ft9_A
Probab=99.94 E-value=2e-26 Score=160.39 Aligned_cols=71 Identities=17% Similarity=0.260 Sum_probs=67.2
Q ss_pred ceEEEEc--cccceEEEEEEeecCCCCeEEEEEeccCc-----------------------eEEEEEEecCCcEEEEcce
Q 045589 66 GIRFTIN--GHSYFNLVLITNVGGAGDVLSVSIKGSRT-----------------------ALSFKVTTSDGCLFISINV 120 (136)
Q Consensus 66 ~i~~~v~--~~~~~~~v~v~n~~G~g~I~~Vevk~s~~-----------------------pls~Rvts~~G~~vv~~~v 120 (136)
+|+|+|+ |++||++++|.|++|+|||++||||++++ |||||||++||++++++||
T Consensus 3 ~i~F~V~~gs~~~~l~vlv~nv~G~gdI~~V~ik~s~t~~W~~M~rwGa~W~~~s~~~l~GplSfRvt~~~G~~~v~~nV 82 (100)
T 3ft1_A 3 QVTFTVQKGSDPKKLVLDIKYTRPGDSLAEVELRQHGSEEWEPLTKKGNVWEVKSSKPLVGPFNFRFMSKGGMRNVFDEV 82 (100)
T ss_dssp EEEEEECTTCBTTEEEEEEEEECTTCCEEEEEEECTTCCCCEECEEETTEEEEECSSCCCSSEEEEEEETTCCEEEEEEE
T ss_pred CEEEEEecCCCcceEEEEEEEcCCCccEEEEEEEeCCCCCeEEecccCCEeEeCCCCCCCCCEEEEEEEcCCcEEEECeE
Confidence 7999998 69999999999999999999999998653 8999999999999999999
Q ss_pred eCCCCCCCeEEecC-CC
Q 045589 121 ARPNWSFGQTYNGR-QF 136 (136)
Q Consensus 121 iP~~w~~G~tY~s~-qf 136 (136)
||++|+||+||+++ ||
T Consensus 83 iPa~W~~G~ty~s~vq~ 99 (100)
T 3ft1_A 83 IPTAFSIGKTYKPEEQE 99 (100)
T ss_dssp ECTTCCTTCEECCCCBC
T ss_pred eCCCCCCCcEEeccccc
Confidence 99999999999998 85
No 5
>2jnz_A PHL P 3 allergen; timothy grass pollen; NMR {Phleum pratense}
Probab=99.92 E-value=1e-24 Score=153.51 Aligned_cols=69 Identities=16% Similarity=0.272 Sum_probs=64.4
Q ss_pred ceEEEEc--cccceEEEEEEeecCCCCeEEEEEec-cCc----------------------eEEEEEEecCCcEEEEcce
Q 045589 66 GIRFTIN--GHSYFNLVLITNVGGAGDVLSVSIKG-SRT----------------------ALSFKVTTSDGCLFISINV 120 (136)
Q Consensus 66 ~i~~~v~--~~~~~~~v~v~n~~G~g~I~~Vevk~-s~~----------------------pls~Rvts~~G~~vv~~~v 120 (136)
+|.|+|+ |++||++++|.|++|+|||++||||+ +.+ |||||||+++|++++++||
T Consensus 14 ~v~f~V~~~snp~~l~VlV~nv~G~GdI~~V~Ik~~~~~~W~~M~rnGa~W~~~s~~~L~GplSfRvtts~G~~~va~nV 93 (108)
T 2jnz_A 14 QVTFTVQKGSDPKKLVLDIKYTRPGDSLAEVELRQHGSEEWEPLTKKGNVWEVKSSKPLVGPFNFRFMSKGGMRNVFDEV 93 (108)
T ss_dssp EEEEEECTTCCSSEEEEEEEEEBTTBCEEEEEEECTTCCCCEECEEETTEEEEECSSCCCSSEEEEEEETTTEEEEEEEE
T ss_pred cEEEEEecCCCccEEEEEEEEeCCCCCEEEEEEEeCCCCcEeEccccCCEeEeCCCCCCCCCEEEEEEEcCCcEEEECeE
Confidence 8999998 79999999999999999999999996 322 8999999999999999999
Q ss_pred eCCCCCCCeEEecC
Q 045589 121 ARPNWSFGQTYNGR 134 (136)
Q Consensus 121 iP~~w~~G~tY~s~ 134 (136)
||++|+||+||+++
T Consensus 94 iPa~W~~Gqty~s~ 107 (108)
T 2jnz_A 94 IPTAFSIGKTYKPE 107 (108)
T ss_dssp ECSSCCTTCEECCC
T ss_pred ECCCCCCCCEEeCC
Confidence 99999999999975
No 6
>1bmw_A PHL P II, pollen allergen PHL P2; allergy, immunoglobulins, immunology,; NMR {Phleum pratense} SCOP: b.7.3.1 PDB: 1who_A 1whp_A 2vxq_A
Probab=99.85 E-value=1e-23 Score=145.70 Aligned_cols=67 Identities=19% Similarity=0.360 Sum_probs=62.1
Q ss_pred ceEEEEc--cccceEEEEEEeecCCCCeEEEEEecc-Cc-----------------------eEEEEEEecCCcEEEEcc
Q 045589 66 GIRFTIN--GHSYFNLVLITNVGGAGDVLSVSIKGS-RT-----------------------ALSFKVTTSDGCLFISIN 119 (136)
Q Consensus 66 ~i~~~v~--~~~~~~~v~v~n~~G~g~I~~Vevk~s-~~-----------------------pls~Rvts~~G~~vv~~~ 119 (136)
+|+|+|+ |++||++++|.|++ |||++||||++ ++ |||||||+++|++++++|
T Consensus 3 ~i~F~V~~gs~~~~l~vlv~nv~--gdI~~V~ik~~~~~~W~~M~r~wGa~W~~~~~~~L~GplSfRvt~~~G~~~v~~n 80 (96)
T 1bmw_A 3 KVTFTVEKGSNEKHLAVLVKYEG--DTMAEVELREHGSDEWVAMTKGEGGVWTFDSEEPLQGPFNFRFLTEKGMKNVFDD 80 (96)
T ss_dssp CCCCCCCTTCSSSBCCBCCCCSS--SCCCCCEECCSSSSSCEECBCCSSSSBBCBCCSSCCCCCCBCCEETTTEECCBSS
T ss_pred CEEEEEecCCCCceEEEEEEEeC--CCEEEEEEEECCCCcEEECccCcCceeEeCCCCCCCCCEEEEEEEcCCcEEEEee
Confidence 7999999 79999999999998 89999999984 32 899999999999999999
Q ss_pred eeCCCCCCCeEEecC
Q 045589 120 VARPNWSFGQTYNGR 134 (136)
Q Consensus 120 viP~~w~~G~tY~s~ 134 (136)
|||++|+||+||+++
T Consensus 81 ViP~~W~~G~ty~~~ 95 (96)
T 1bmw_A 81 VVPEKYTIGATYAPE 95 (96)
T ss_dssp CSCSSCCSSSCCCC-
T ss_pred EeCCCCCCCCEEeCC
Confidence 999999999999974
No 7
>1wc2_A Endoglucanase; hydrolase, cellulase, cellulose, double-PSI fold, glycoside hydrolase; 1.2A {Mytilus edulis} SCOP: b.52.1.1
Probab=99.74 E-value=2.5e-19 Score=135.41 Aligned_cols=67 Identities=21% Similarity=0.369 Sum_probs=58.6
Q ss_pred CccccC-----CCCCCCCCceeeEecccccCCC------Ccccccc-ccc------------------------------
Q 045589 1 RSFGYG-----NLYSQGYGTSSAALSTALFNSG------VTCGVCL-IKC------------------------------ 38 (136)
Q Consensus 1 GaCGyg-----~~~~~~~~~~~aA~~~~~f~~g------~~CG~C~-v~C------------------------------ 38 (136)
|||||| +++.++|+.++||||++||++| ++||+|| |+|
T Consensus 28 GACGyG~~~~~~l~~~gyg~~tAALStaLFn~G~~~w~G~~CG~Cyel~c~~~~c~~cg~~~~~g~SI~VtaTN~CPpn~ 107 (181)
T 1wc2_A 28 GACGCGPASGDAQFGWNAGSFVAAASQMYFDSGNKGWCGQHCGQCIKLTTTGGYVPGQGGPVREGLSKTFMITNLCPNIY 107 (181)
T ss_dssp TTTTCSCSSSSBCCSSGGGSCEEEEEHHHHCTTCCSSSCTTTTCEEEEEEEEEECTTSCCCCCTTCEEEEEEEEEECSST
T ss_pred cccCcCcCCCCCccccCCcceeeecCHHHhCCCccccccccCCCcEEEEcCCCCcccccccCCCCCeEEEEEecCCCCCC
Confidence 899999 6778899999999999999997 8999999 984
Q ss_pred ----------------------------HHHHHhhcccCceEeEEEEEeecccCCceE
Q 045589 39 ----------------------------PIFQHIAHYKAGIVPVRYRRVACGKSGGIR 68 (136)
Q Consensus 39 ----------------------------~aF~~ia~~~~G~i~i~yrrV~C~~~g~i~ 68 (136)
+| .+||....|++||+||||+|+..+++.
T Consensus 108 ~nggWCn~pp~~~~~n~~G~~~HFDLs~pa-~~Ia~~~~GivpV~yrrV~C~~~~~~~ 164 (181)
T 1wc2_A 108 PNQDWCNQGSQYGGHNKYGYELHLDLENGR-SQVTGMGWNNPETTWEVVNCDSEHNHD 164 (181)
T ss_dssp TSTTTSCCSSSSSCCCTTSCSEEEEEECTT-STTGGGTCSSEEEEEEEECHHHHHHHC
T ss_pred CCCCccCCCcccCcccccCccccccccchH-HHhhhhcCCCceeEEEEEeCCCCCCcC
Confidence 45 678888899999999999998754443
No 8
>1bw3_A Barwin, basic barley SEED protein; lectin; NMR {Hordeum vulgare} SCOP: b.52.1.2 PDB: 1bw4_A
Probab=98.20 E-value=4.5e-07 Score=64.86 Aligned_cols=37 Identities=32% Similarity=0.772 Sum_probs=33.9
Q ss_pred CCCCcccccc-ccc-------------------------HHHHHhhc----ccCceEeEEEEEeecc
Q 045589 26 NSGVTCGVCL-IKC-------------------------PIFQHIAH----YKAGIVPVRYRRVACG 62 (136)
Q Consensus 26 ~~g~~CG~C~-v~C-------------------------~aF~~ia~----~~~G~i~i~yrrV~C~ 62 (136)
++++.||+|+ |+| .||.+|+. ...|+++|+|++|+|+
T Consensus 58 ~~g~~CG~cv~Vtn~~nGksV~V~VvD~CP~ggLDLS~~~AF~~Ia~~g~G~~~G~i~V~w~~V~C~ 124 (125)
T 1bw3_A 58 RGQAACGKCLRVTNPATGAQITARIVDQCANGGLDLDWDTVFTKIDTNGIGYQQGHLNVNYQFVDCR 124 (125)
T ss_dssp CSGGGTTCEEEEEETTTTEEEEEEEEECCSSSSCCSCSSSSHHHHCSSCHHHHHSEEEEEEEEECCC
T ss_pred CCCcccCCEEEeEeCCCCCEEEEEEEEeCCCCCCCCCCHHHHHHHhccCCcccCcEEEEEEEEEeCC
Confidence 7889999999 964 79999998 7889999999999996
No 9
>3m3g_A EPL1 protein; fungal, plant defense, fungus, polysaccharide-binding protei; 1.39A {Hypocrea virens}
Probab=92.33 E-value=0.15 Score=35.80 Aligned_cols=34 Identities=18% Similarity=0.438 Sum_probs=27.3
Q ss_pred CCCcccccc-ccc---------------------HHHHHhhcc---cCceEeEEEEEee
Q 045589 27 SGVTCGVCL-IKC---------------------PIFQHIAHY---KAGIVPVRYRRVA 60 (136)
Q Consensus 27 ~g~~CG~C~-v~C---------------------~aF~~ia~~---~~G~i~i~yrrV~ 60 (136)
|...||.|+ ++= +||..|.+- ..|+|+++|++|+
T Consensus 56 ns~~CGtC~~lty~g~si~vlaID~a~~Gfnis~~A~n~LT~G~a~~lG~V~a~~~~V~ 114 (120)
T 3m3g_A 56 NSASCGTCWKLQYSGHTIYVLAVDHAASGFNIALDAMNALTGGQAVQLGRVSATATQVP 114 (120)
T ss_dssp TCTTTTCEEEEEETTEEEEEEEEEECSSSEEECHHHHHHHHTSCHHHHCEEECEEEEEC
T ss_pred CCCCCCceEEEEECCeEEEEEEEecCCCceeecHHHHHHhhCCcceeeeeEeEEEEEcC
Confidence 458999999 863 888888643 3489999999986
No 10
>2kqa_A Cerato-platanin; elicitor, secreted, toxin; NMR {Ceratocystis platani}
Probab=91.89 E-value=0.22 Score=35.42 Aligned_cols=44 Identities=25% Similarity=0.530 Sum_probs=32.6
Q ss_pred eeeEecc-cccCCCCcccccc-ccc----------------------HHHHHhhc-ccCceE-eEEEEEee
Q 045589 16 SSAALST-ALFNSGVTCGVCL-IKC----------------------PIFQHIAH-YKAGIV-PVRYRRVA 60 (136)
Q Consensus 16 ~~aA~~~-~~f~~g~~CG~C~-v~C----------------------~aF~~ia~-~~~G~i-~i~yrrV~ 60 (136)
++.+... +-|| ...||.|+ ++= +||..|.+ ...|+| +++|++|+
T Consensus 51 ~IGga~~iagWN-S~~CGtC~~lty~ng~sI~vlaID~A~~gFnIs~~Amn~LT~G~~lG~V~~a~~~qV~ 120 (129)
T 2kqa_A 51 NVGGIPDIAGWD-SPSCGTCWKVTIPNGNSIFIRGVDSGRGGFNVNPTAFTKLVGSTEAGRVDNVNYVQVD 120 (129)
T ss_dssp SEEEETTCCSTT-CTTCSCEEEEEETTTEEEEEEEEEECSSSEEECHHHHHHHHSSSSSCCBCSCEEEECC
T ss_pred eeccchhhccCC-CCCCCceEEEEEcCCCEEEEEEEccCCCceeehHHHHHHhcCCcccCcEeEEEEEEcC
Confidence 4544443 3466 79999999 852 78888876 567999 99999985
No 11
>3suk_A Cerato-platanin-like protein; double PSI beta barrel, unknown function; 1.34A {Moniliophthora perniciosa}
Probab=90.36 E-value=0.41 Score=33.84 Aligned_cols=34 Identities=24% Similarity=0.514 Sum_probs=26.7
Q ss_pred CCCcccccc-ccc-------------------------HHHHHhhcc---cCceEeEEEEEee
Q 045589 27 SGVTCGVCL-IKC-------------------------PIFQHIAHY---KAGIVPVRYRRVA 60 (136)
Q Consensus 27 ~g~~CG~C~-v~C-------------------------~aF~~ia~~---~~G~i~i~yrrV~ 60 (136)
|...||.|| ++= +||..|.+- ..|+|+++|++|+
T Consensus 57 nS~~CGtC~~lty~g~~~~~si~vlaID~a~~Gfnis~~Amn~LT~G~a~~lG~V~~~~~~V~ 119 (125)
T 3suk_A 57 NSPACGNCYTISFTFQGVTRSINLVAIDHAGNGFNVAQAAMDELTNGNAVALGTIDVQSQQVA 119 (125)
T ss_dssp TCTTTTCEEEEEEEETTEEEEEEEEEEEECSSSEEECHHHHHHHHTSCHHHHCEEEEEEEEEC
T ss_pred CCCCCCeeEEEEEcCCCcceEEEEEEEecCCCceeecHHHHHHhcCCcccccceEeEEEEEcC
Confidence 348999999 852 788888643 3489999999986
No 12
>3sul_A Cerato-platanin-like protein; double PSI beta barrel, unknown function; 1.63A {Moniliophthora perniciosa}
Probab=89.27 E-value=0.47 Score=33.40 Aligned_cols=43 Identities=26% Similarity=0.411 Sum_probs=30.9
Q ss_pred eeEecc-cccCCCCcccccc-ccc-----------------------HHHHHhhcc---cCceEeEEEEEee
Q 045589 17 SAALST-ALFNSGVTCGVCL-IKC-----------------------PIFQHIAHY---KAGIVPVRYRRVA 60 (136)
Q Consensus 17 ~aA~~~-~~f~~g~~CG~C~-v~C-----------------------~aF~~ia~~---~~G~i~i~yrrV~ 60 (136)
+++... +-|+. ..||.|+ ++= +||..|.+- ..|+|+++|++|+
T Consensus 46 IGg~~~V~gwnS-~~CGtC~~lty~~~g~si~vlaID~a~~Gfnis~~Amn~LT~G~a~~lG~V~a~~~qV~ 116 (122)
T 3sul_A 46 VGAVDTITGWNS-ESCGTCYQITWSGTGKTIHVVGVDVAGNGFNVGQRAMDDLTNGQAVALGNIDVTATLVD 116 (122)
T ss_dssp EEEETTCCSTTC-TTTTCEEEEEETTTTEEEEEEEEEECSSSEEECHHHHHHHHTSCHHHHSEEEEEEEEEC
T ss_pred cccccccccCCC-CCCCceEEEEEcCCCcEEEEEEEecCCCceeehHHHHHHhcCCcceecceEeEEEEEcC
Confidence 544332 34555 9999999 852 888888643 3489999999986
No 13
>3suj_A Cerato-platanin 1; double PSI beta barrel, unknown function; 1.34A {Moniliophthora perniciosa}
Probab=89.00 E-value=0.51 Score=33.41 Aligned_cols=34 Identities=24% Similarity=0.554 Sum_probs=26.8
Q ss_pred CCCcccccc-ccc--------------------------HHHHHhhcc---cCceEeEEEEEee
Q 045589 27 SGVTCGVCL-IKC--------------------------PIFQHIAHY---KAGIVPVRYRRVA 60 (136)
Q Consensus 27 ~g~~CG~C~-v~C--------------------------~aF~~ia~~---~~G~i~i~yrrV~ 60 (136)
|...||.|| ++= +||..|.+- ..|+|+++|++|+
T Consensus 56 ns~~CGtC~~lty~g~~~~~~si~vlaID~a~~Gfnis~~Amn~LT~g~a~~lG~V~~~~~~V~ 119 (127)
T 3suj_A 56 NSPNCGSCYQLTYSSAHTTPKSIYMVAIDRSAEGFTASKQAMDDLTNKRAEELGTVNVDVRKVD 119 (127)
T ss_dssp TCTTTTCEEEEEECCSSSCCEEEEEEEEEECSSSEEECHHHHHHHHTSCHHHHSSEEEEEEEEC
T ss_pred CCCCCCceEEEEECCCCCcceEEEEEEEecCCCceeecHHHHHHhcCCccccceeEEEEEEEeC
Confidence 458999999 852 888888643 3489999999986
No 14
>3sum_A Cerato-platanin-like protein; double PSI beta barrel, unknown function; 1.87A {Moniliophthora perniciosa}
Probab=80.99 E-value=1.9 Score=30.85 Aligned_cols=35 Identities=14% Similarity=0.495 Sum_probs=26.4
Q ss_pred CCCCcccccc-ccc-----------------------HHHHHhhcc-------cCceEeE-EEEEee
Q 045589 26 NSGVTCGVCL-IKC-----------------------PIFQHIAHY-------KAGIVPV-RYRRVA 60 (136)
Q Consensus 26 ~~g~~CG~C~-v~C-----------------------~aF~~ia~~-------~~G~i~i-~yrrV~ 60 (136)
-+...||.|+ ++= +|+..|.+- ..|+|++ +|++|+
T Consensus 55 wns~~CGtCwkLtY~G~sI~vlaID~a~~g~~FnIs~~Amn~LT~G~~a~~a~elG~Vda~~~~qVd 121 (136)
T 3sum_A 55 EAQTECGSCWKLRYKGNHAFVTVVDRVEEANLFVGGTDLVKNLTTFNGAPEGYDWGTAQLFSAYQVD 121 (136)
T ss_dssp BTTBCTTCEEEEEETTEEEEEEEEECCCSTTEEEECHHHHHHHTCBTTBCHHHHHSEEECSEEEEEC
T ss_pred cCCCCCCceEEEEECCeEEEEEEEecCCCcceEeehHHHHHHHhCCCccccceecceeeeeEEEEcC
Confidence 5669999999 863 666666532 2489999 999985
No 15
>2kct_A Cytochrome C-type biogenesis protein CCME; solution structure, heme chaperone, cytochrome C biogenesis, OB-fold domain, NESG, PSI-2; NMR {Desulfovibrio vulgaris str}
Probab=71.32 E-value=4.6 Score=26.87 Aligned_cols=29 Identities=10% Similarity=0.247 Sum_probs=22.6
Q ss_pred eEEEEEEecC--C--cEEEEcceeCCCCCCCeE
Q 045589 102 ALSFKVTTSD--G--CLFISINVARPNWSFGQT 130 (136)
Q Consensus 102 pls~Rvts~~--G--~~vv~~~viP~~w~~G~t 130 (136)
-++|+||+.+ + -.|++..++|+.|+.|+-
T Consensus 30 ~v~F~vtD~~~~~~~v~V~Y~GilPDlFrEGqg 62 (94)
T 2kct_A 30 GVRFRLEDKDNTSKTVWVLYKGAVPDTFKPGVE 62 (94)
T ss_dssp EEEEEEECSSCTTCEEEEEEESCCCTTCCTTCE
T ss_pred EEEEEEEcCCCCCcEEEEEECCCCCccccCCCe
Confidence 6899999862 3 456788899999998863
No 16
>1sr3_A APO-CCME; OB fold, beta barrel, flexible C-terminal domain, chaperone; NMR {Escherichia coli} SCOP: b.40.9.1
Probab=63.22 E-value=7.5 Score=27.61 Aligned_cols=28 Identities=14% Similarity=0.214 Sum_probs=22.3
Q ss_pred eEEEEEEecCC-cEEEEcceeCCCCCCCe
Q 045589 102 ALSFKVTTSDG-CLFISINVARPNWSFGQ 129 (136)
Q Consensus 102 pls~Rvts~~G-~~vv~~~viP~~w~~G~ 129 (136)
.++|+|||... -.|++..++|+.|+-|+
T Consensus 50 ~v~F~vtD~~~~v~V~Y~GilPDlFrEGq 78 (136)
T 1sr3_A 50 KVTFTIYDAEGSVDVSYEGILPDLFREGQ 78 (136)
T ss_dssp EEEEEEECSSCEEEEEEESCCCTTCCTTS
T ss_pred EEEEEEEeCCcEEEEEECCCCCccccCCC
Confidence 68999998544 56677889999999875
No 17
>1j6q_A Cytochrome C maturation protein E; all-beta protein, heme delivery,cytochrome C maturation, OB- (oligonucleotide binding)fold; NMR {Shewanella putrefaciens} SCOP: b.40.9.1 PDB: 1lm0_A
Probab=58.37 E-value=11 Score=26.78 Aligned_cols=28 Identities=21% Similarity=0.230 Sum_probs=22.4
Q ss_pred eEEEEEEe-cCC-cEEEEcceeCCCCCCCe
Q 045589 102 ALSFKVTT-SDG-CLFISINVARPNWSFGQ 129 (136)
Q Consensus 102 pls~Rvts-~~G-~~vv~~~viP~~w~~G~ 129 (136)
.++|+||| ... -.|++..++|+.|+-|+
T Consensus 54 ~v~F~vtD~~~~~v~V~Y~GilPDlFrEGq 83 (136)
T 1j6q_A 54 HVQFAVHDSLGGEILVTYDDLLPDLFREGQ 83 (136)
T ss_dssp CEEEEEECTTCCCEEEEECSCCTTSCCSSS
T ss_pred EEEEEEEcCCCCEEEEEECCCCCccccCCC
Confidence 69999998 333 56778889999999875
No 18
>4avr_A PA4485; unknown function, GRAM-negative bacteria, infectious disease structure-based inhibitor design; 1.08A {Pseudomonas aeruginosa PA01}
Probab=47.23 E-value=24 Score=23.48 Aligned_cols=21 Identities=19% Similarity=0.453 Sum_probs=19.2
Q ss_pred HHHHHhhcccCceEeEEEEEe
Q 045589 39 PIFQHIAHYKAGIVPVRYRRV 59 (136)
Q Consensus 39 ~aF~~ia~~~~G~i~i~yrrV 59 (136)
.||.+|+....|+.+|+++.+
T Consensus 74 aAa~~Lg~~~~G~~~V~ve~~ 94 (95)
T 4avr_A 74 KAAEGLGMIRSGVAPVRIESL 94 (95)
T ss_dssp HHHHHHTCTTTSCEEEEEEEC
T ss_pred HHHHHhCCcCCCEEEEEEEEe
Confidence 999999999999999999875
No 19
>3isy_A Bsupi, intracellular proteinase inhibitor; intracellular proteinase inhibitor bsupi, beta sandwich, GRE structural genomics; HET: PG4; 2.61A {Bacillus subtilis}
Probab=46.30 E-value=68 Score=21.94 Aligned_cols=20 Identities=15% Similarity=-0.002 Sum_probs=13.5
Q ss_pred cCCcEEEEcceeCCCCCCCe
Q 045589 110 SDGCLFISINVARPNWSFGQ 129 (136)
Q Consensus 110 ~~G~~vv~~~viP~~w~~G~ 129 (136)
..|+.+++...+|..-.+|.
T Consensus 75 ~pGE~~~f~~~w~~~~~pG~ 94 (120)
T 3isy_A 75 ESGETYDFSDVWKEVPEPGT 94 (120)
T ss_dssp CTTCEEEEEEEESSCCCSEE
T ss_pred CCCCEEEEEEEeCCCCCCcc
Confidence 56777777777775555553
No 20
>2d7n_A Filamin-C; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.18.10
Probab=43.94 E-value=56 Score=21.05 Aligned_cols=21 Identities=5% Similarity=0.116 Sum_probs=14.0
Q ss_pred eEeEEEEEeecccCC-ceEEEEc
Q 045589 51 IVPVRYRRVACGKSG-GIRFTIN 72 (136)
Q Consensus 51 ~i~i~yrrV~C~~~g-~i~~~v~ 72 (136)
--|.++ .++|...+ .++..|.
T Consensus 8 ~~p~~f-~i~~~~g~~~l~v~V~ 29 (93)
T 2d7n_A 8 LRPFNL-VIPFAVQKGELTGEVR 29 (93)
T ss_dssp BCCEEE-EECCCCSSSCEEEEEE
T ss_pred cCCEEE-EEEcCCCCCCEEEEEE
Confidence 346777 67787644 7777776
No 21
>3fcg_A F1 capsule-anchoring protein; beta barrel, beta strand swapping, cell membrane, cell outer membrane, cell projection, fimbrium, membrane; 2.85A {Yersinia pestis}
Probab=38.71 E-value=57 Score=21.26 Aligned_cols=15 Identities=27% Similarity=0.361 Sum_probs=12.0
Q ss_pred eEEEEEEecCCcEEE
Q 045589 102 ALSFKVTTSDGCLFI 116 (136)
Q Consensus 102 pls~Rvts~~G~~vv 116 (136)
-|.+.|++.+|++..
T Consensus 61 dl~V~v~eadG~~~~ 75 (90)
T 3fcg_A 61 ELKVIIHESDGTKQV 75 (90)
T ss_dssp EEEEEEECTTSCEEE
T ss_pred eEEEEEEECCCCEEE
Confidence 788999999996554
No 22
>3nrl_A Uncharacterized protein rumgna_01417; beta protein, structural genomics, PSI-2, protein structure initiative; 1.90A {Ruminococcus gnavus}
Probab=33.83 E-value=13 Score=24.06 Aligned_cols=17 Identities=35% Similarity=0.925 Sum_probs=13.8
Q ss_pred cccccCCCCcccccc-cc
Q 045589 21 STALFNSGVTCGVCL-IK 37 (136)
Q Consensus 21 ~~~~f~~g~~CG~C~-v~ 37 (136)
+..-|.+|.-||.|| |.
T Consensus 23 ~~~~~ygGlHCGE~feV~ 40 (81)
T 3nrl_A 23 DLESFYGGLHCGECFDVK 40 (81)
T ss_dssp ETTEECCCCCTTCEEEEE
T ss_pred ccccccCCcccccEEEEE
Confidence 345578899999999 87
No 23
>2kt7_A Putative peptidoglycan bound protein (LPXTG motif); immunoglobulin fold, all-beta, peptidoglycan binding protein, structural genomics; NMR {Listeria monocytogenes}
Probab=30.87 E-value=72 Score=21.24 Aligned_cols=28 Identities=11% Similarity=0.196 Sum_probs=22.4
Q ss_pred eEEEEEEecCCcEEEEcceeCCCCCCCeEEecC
Q 045589 102 ALSFKVTTSDGCLFISINVARPNWSFGQTYNGR 134 (136)
Q Consensus 102 pls~Rvts~~G~~vv~~~viP~~w~~G~tY~s~ 134 (136)
|+.++..+.+|+.|....++. |..|++.
T Consensus 7 ~VtV~YvDe~Gn~Ia~~~~lt-----G~~Y~t~ 34 (102)
T 2kt7_A 7 TVKVEYVDADGAEIAPSDTLT-----DYHYVST 34 (102)
T ss_dssp CEEEEEEETTSSEEEEEEEEC-----SSEEECC
T ss_pred EEEEEEEcCCCCCCCCCEeec-----CCccccc
Confidence 788889999998888888776 5777754
No 24
>2oxg_Z SOXZ protein; immunoglobulin-like beta-sandwich fold, transport protein; 1.40A {Paracoccus denitrificans} PDB: 2ox5_Z 2oxh_Z*
Probab=28.22 E-value=1.3e+02 Score=19.89 Aligned_cols=17 Identities=18% Similarity=0.479 Sum_probs=11.0
Q ss_pred eEEEEEEecCCcEEEEc
Q 045589 102 ALSFKVTTSDGCLFISI 118 (136)
Q Consensus 102 pls~Rvts~~G~~vv~~ 118 (136)
.|+++.++++|+.....
T Consensus 86 ~l~v~~~Dn~G~~~~~~ 102 (108)
T 2oxg_Z 86 EFKFTWYDDDGSVYEDV 102 (108)
T ss_dssp EEEEEEEETTSCEEEEE
T ss_pred EEEEEEEECCCCEEEEE
Confidence 56777777777655544
No 25
>3pe9_A Fibronectin(III)-like module; CBHA, beta-sandwich, cellulosome, unknown function; 1.69A {Clostridium thermocellum}
Probab=26.35 E-value=1.4e+02 Score=19.41 Aligned_cols=13 Identities=15% Similarity=0.171 Sum_probs=7.9
Q ss_pred CCCeEEEEEeccC
Q 045589 88 AGDVLSVSIKGSR 100 (136)
Q Consensus 88 ~g~I~~Vevk~s~ 100 (136)
.|.|.+||+.-.+
T Consensus 29 dg~V~kVef~vdg 41 (98)
T 3pe9_A 29 DGKISRVDFLVDG 41 (98)
T ss_dssp SSCEEEEEEEETT
T ss_pred CCCEEEEEEEECC
Confidence 3457777776443
No 26
>2kvz_A ISPE; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, unknown function; NMR {Listeria monocytogenes}
Probab=25.83 E-value=74 Score=20.46 Aligned_cols=31 Identities=10% Similarity=0.068 Sum_probs=23.9
Q ss_pred eEEEEEEecCCcEEEEcceeCCCCCCCeEEecC
Q 045589 102 ALSFKVTTSDGCLFISINVARPNWSFGQTYNGR 134 (136)
Q Consensus 102 pls~Rvts~~G~~vv~~~viP~~w~~G~tY~s~ 134 (136)
|+.++..+.+|+.|....++- -..|..|++.
T Consensus 8 ~VtV~YvDe~Gn~La~~~~lt--G~vG~~Y~t~ 38 (85)
T 2kvz_A 8 QVTVNYLDENNTSIAPSLYLS--GLFNEAYNVP 38 (85)
T ss_dssp CEEEEEECSSSCEEEEEEEEC--CCTTCCCCCC
T ss_pred eEEEEEECCCCCCCCCCeEEe--eeCCCcceec
Confidence 788888888888888888774 5567777654
No 27
>3fip_A Outer membrane usher protein PAPC; beta barrel, protein translocase, cell membrane, cell outer fimbrium, transmembrane, transport; 3.15A {Escherichia coli} PDB: 2vqi_A*
Probab=25.37 E-value=1.1e+02 Score=25.61 Aligned_cols=29 Identities=17% Similarity=0.125 Sum_probs=22.5
Q ss_pred eEEEEEEecCCc---EEEEcceeCCCCCCCeE
Q 045589 102 ALSFKVTTSDGC---LFISINVARPNWSFGQT 130 (136)
Q Consensus 102 pls~Rvts~~G~---~vv~~~viP~~w~~G~t 130 (136)
.|.|+|+..+|+ ..+....+|.-..+|..
T Consensus 162 dl~V~v~EadG~~~~f~vp~~s~p~llr~G~~ 193 (493)
T 3fip_A 162 RLDVEVIEQNGRKKTFQVDTASVPYLTRPGQV 193 (493)
T ss_dssp EEEEEEECTTSCBCCEEEECCCCCCCCCTTCE
T ss_pred eEEEEEEECCCcEEEEEEeeEechhhccCCce
Confidence 899999998884 44566688888888853
No 28
>2c9r_A COPC, copper resistance protein C; copper transport, copper proteins, copper dissociation const metal-binding, electron transport; 2.0A {Pseudomonas syringae PV} PDB: 1m42_A 1nm4_A 1ot4_A 2c9p_A 2c9q_A
Probab=24.87 E-value=53 Score=21.51 Aligned_cols=27 Identities=26% Similarity=0.519 Sum_probs=20.0
Q ss_pred cccCceEeEEEEEeecc---cCCceEEEEc
Q 045589 46 HYKAGIVPVRYRRVACG---KSGGIRFTIN 72 (136)
Q Consensus 46 ~~~~G~i~i~yrrV~C~---~~g~i~~~v~ 72 (136)
....|.+.|.||-|+=+ ..|.+.|+|+
T Consensus 73 ~L~~G~YtV~WrvvS~DGH~~~G~~~FtV~ 102 (102)
T 2c9r_A 73 PLTAGTYKVDWRAVSSDTFPITGSVTFKVK 102 (102)
T ss_dssp CCCSEEEEEEEEECCTTCCCEEEEEEEEEC
T ss_pred CCCCceEEEEEEEEecCCCccCCEEEEEEC
Confidence 34679999999999864 3467777774
No 29
>1v8h_A Sulfur oxidation protein SOXZ; lithotrophic sulfur oxidation, unknown function, structural genomics; 1.20A {Thermus thermophilus HB8} SCOP: b.1.18.19
Probab=24.06 E-value=1.6e+02 Score=19.41 Aligned_cols=18 Identities=17% Similarity=0.145 Sum_probs=12.1
Q ss_pred eEEEEEEecCCcEEEEcc
Q 045589 102 ALSFKVTTSDGCLFISIN 119 (136)
Q Consensus 102 pls~Rvts~~G~~vv~~~ 119 (136)
.|+++.++++|+......
T Consensus 85 ~l~v~~~Dn~G~~~~~~~ 102 (107)
T 1v8h_A 85 TFTIKLKDTDGDTGEASV 102 (107)
T ss_dssp EEEEEEEETTSCEEEEEE
T ss_pred eEEEEEEECCCCEEEEEE
Confidence 477777887776665543
No 30
>1lyq_A PCOC copper resistance protein; beta barrel, IG domain, metal binding protein; 1.50A {Escherichia coli} SCOP: b.1.18.17 PDB: 1ix2_A
Probab=23.77 E-value=57 Score=21.46 Aligned_cols=27 Identities=30% Similarity=0.490 Sum_probs=20.1
Q ss_pred cccCceEeEEEEEeecc---cCCceEEEEc
Q 045589 46 HYKAGIVPVRYRRVACG---KSGGIRFTIN 72 (136)
Q Consensus 46 ~~~~G~i~i~yrrV~C~---~~g~i~~~v~ 72 (136)
....|.+.|.||-|+=+ ..|.+.|+|+
T Consensus 75 ~L~~G~YtV~WrvvS~DGH~~~G~~~FtV~ 104 (104)
T 1lyq_A 75 PLPAGTYRVDWRAVSSDTHPITGNYTFTVK 104 (104)
T ss_dssp CCCSEEEEEEEEECCTTSCCEEEEEEEEEC
T ss_pred CCCCceEEEEEEEEecCCCccCCEEEEEEC
Confidence 34679999999999864 3567778774
No 31
>3sbc_A Peroxiredoxin TSA1; alpha-beta fold, peroxidase, cytosol, oxidoreductase; 2.80A {Saccharomyces cerevisiae}
Probab=22.70 E-value=27 Score=26.20 Aligned_cols=11 Identities=36% Similarity=0.631 Sum_probs=9.6
Q ss_pred ceeCCCCCCCe
Q 045589 119 NVARPNWSFGQ 129 (136)
Q Consensus 119 ~viP~~w~~G~ 129 (136)
.+.|+||++|.
T Consensus 187 ~~~Pa~W~~G~ 197 (216)
T 3sbc_A 187 TVLPCNWTPGA 197 (216)
T ss_dssp CBBCTTCCTTS
T ss_pred CCcCCCCCCCC
Confidence 38899999996
No 32
>2qgu_A Probable signal peptide protein; NESG, RSR89, Q8XV73, structural genomics, PSI-2, protein STR initiative; HET: MSE PEF; 1.50A {Ralstonia solanacearum}
Probab=20.39 E-value=1.5e+02 Score=21.64 Aligned_cols=30 Identities=13% Similarity=0.133 Sum_probs=19.0
Q ss_pred EEEEEeccCc--eEEEEEEecCCcEEEEccee
Q 045589 92 LSVSIKGSRT--ALSFKVTTSDGCLFISINVA 121 (136)
Q Consensus 92 ~~Vevk~s~~--pls~Rvts~~G~~vv~~~vi 121 (136)
+.++|...+. ++++|+...+|+|.+.+=+|
T Consensus 137 V~t~i~~~g~~i~v~y~l~~~~g~WkvyDv~i 168 (211)
T 2qgu_A 137 VRSTVNNNGEPVALDYRVEKSPNGWKVYDINI 168 (211)
T ss_dssp EEEEEEETTEEEEEEEEEEEETTEEEEEEEEE
T ss_pred EEEEEEeCCCeEEEEEEEEEcCCceEEEEEEE
Confidence 3344433333 78888877788888766544
No 33
>3es4_A Uncharacterized protein DUF861 with A RMLC-like C; 17741406, protein of unknown function (DUF861) with A RMLC-L fold; HET: MSE; 1.64A {Agrobacterium tumefaciens str}
Probab=20.02 E-value=71 Score=21.61 Aligned_cols=27 Identities=4% Similarity=-0.146 Sum_probs=17.9
Q ss_pred EEEEEecCCcEEE--Ecc--eeCCCCCCCeEEe
Q 045589 104 SFKVTTSDGCLFI--SIN--VARPNWSFGQTYN 132 (136)
Q Consensus 104 s~Rvts~~G~~vv--~~~--viP~~w~~G~tY~ 132 (136)
+.+||..+|+.+. +-| ++|++|+ -+++
T Consensus 71 ~~~lt~ddG~~~~l~aGD~~~~P~G~~--gtWe 101 (116)
T 3es4_A 71 EALYSQADADPVKIGPGSIVSIAKGVP--SRLE 101 (116)
T ss_dssp CEEEEETTCCCEEECTTEEEEECTTCC--EEEE
T ss_pred EEEEEeCCCeEEEECCCCEEEECCCCe--EEEE
Confidence 3677777786544 334 8999998 4454
Done!