BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 045600
(899 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9SVP7|PP307_ARATH Pentatricopeptide repeat-containing protein At4g13650
OS=Arabidopsis thaliana GN=PCMP-H42 PE=2 SV=2
Length = 1064
Score = 429 bits (1104), Expect = e-119, Method: Compositional matrix adjust.
Identities = 250/805 (31%), Positives = 425/805 (52%), Gaps = 15/805 (1%)
Query: 100 ALSSFPIIKKPCVFLQNLMIRGLSNCGLHADLLHVYIKCRLSGCPSDDFTFPFLIKACSS 159
A F + + +F N MI+ L++ L ++ ++++ ++ TF +++AC
Sbjct: 139 AFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRG 198
Query: 160 LS-DLRIGREIHCVIFRTGYHQNLVIQTALVDFYAKKGEMLTARLLFDQIPLADLVSCNT 218
S + +IH I G + V+ L+D Y++ G + AR +FD + L D S
Sbjct: 199 GSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVA 258
Query: 219 LMAGYSFNGLDQEALETFRRILTVGLKPNVSTFSSVIPVCTRLGHFCFGKSLHGFTIKSG 278
+++G S N + EA+ F + +G+ P FSSV+ C ++ G+ LHG +K G
Sbjct: 259 MISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLG 318
Query: 279 YLFDDFLVPALISMYAGDLDLSTARKLFDSLLEKNASVWNAMISAYTQSKKFFEAFEIFR 338
+ D ++ AL+S+Y +L +A +F ++ +++A +N +I+ +Q +A E+F+
Sbjct: 319 FSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFK 378
Query: 339 QMIRAEMQPDLVTFVSIIPSCENYCSFQCGESLTACVIKNGLGNQPSVLTALLSMYAKLG 398
+M ++PD T S++ +C + G+ L A K G + + ALL++YAK
Sbjct: 379 RMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCA 438
Query: 399 NIDSAKFLFDQIPNRNLLCWNAMMSAY-----VRNRFWDASLAVFRQMQFAGLNPDAVSI 453
+I++A F + N++ WN M+ AY +RN F +FRQMQ + P+ +
Sbjct: 439 DIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSF-----RIFRQMQIEEIVPNQYTY 493
Query: 454 ISVLSGCSKLDDVLLGKSAHAFSLRKGIVSNLDVLNALLMFYSDGGQFSYAFTLFHRMST 513
S+L C +L D+ LG+ H+ ++ N V + L+ Y+ G+ A+ + R +
Sbjct: 494 PSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAG 553
Query: 514 RSSVSWNTLISRCVQNGAVEEAVILLQRMQKEGVELDMVTLISFLPNLNKNGNIKQGMVI 573
+ VSW T+I+ Q ++A+ ++M G+ D V L + + +K+G I
Sbjct: 554 KDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQI 613
Query: 574 HGYAIKTGCVADVTFLNALITMYCNCGSTNDGRLCLLLFQMGDKREISLWNAIISVYVQT 633
H A +G +D+ F NAL+T+Y CG + L + GD WNA++S + Q+
Sbjct: 614 HAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDN---IAWNALVSGFQQS 670
Query: 634 NKAKQAVAFFTELLGAGLEPDNVTVLSIISAGVLINSLNLTHSLMAFVIRKGLDKHVAVS 693
++A+ F + G++ +N T S + A ++ + A + + G D V
Sbjct: 671 GNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVC 730
Query: 694 NALMDSYVRCGNISMARKLFGSLIYKDAFSWSVMINGYGLYGDGEAALELFKQMQLSGVR 753
NAL+ Y +CG+IS A K F + K+ SW+ +IN Y +G G AL+ F QM S VR
Sbjct: 731 NALISMYAKCGSISDAEKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVR 790
Query: 754 PNEITYLGVLSACSHAGLVEQSKMVFKSM-VEHGISQKMEHYACMVDLLGRTGHLNEAFI 812
PN +T +GVLSACSH GLV++ F+SM E+G+S K EHY C+VD+L R G L+ A
Sbjct: 791 PNHVTLVGVLSACSHIGLVDKGIAYFESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKE 850
Query: 813 FVKKLPCKPSVSILESLLGACRIHGNVELGEIISGMLFEMDPENPGSYVMLHNIYASAGR 872
F++++P KP + +LL AC +H N+E+GE + L E++PE+ +YV+L N+YA + +
Sbjct: 851 FIQEMPIKPDALVWRTLLSACVVHKNMEIGEFAAHHLLELEPEDSATYVLLSNLYAVSKK 910
Query: 873 WEDAYRVRSCMKRSRLKKVPGFSLV 897
W+ R MK +KK PG S +
Sbjct: 911 WDARDLTRQKMKEKGVKKEPGQSWI 935
Score = 259 bits (662), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 184/726 (25%), Positives = 331/726 (45%), Gaps = 22/726 (3%)
Query: 114 LQNLMIRGLSNCGLHADLLHVYIKCRLSGCPSDDFTFPFLIKACSSLSDLRIGREIHCVI 173
Q I + N G+ + H +K L GC +K SL + GR++H I
Sbjct: 67 FQEKRIDSVENRGIRPN--HQTLKWLLEGC----------LKTNGSLDE---GRKLHSQI 111
Query: 174 FRTGYHQNLVIQTALVDFYAKKGEMLTARLLFDQIPLADLVSCNTLMAGYSFNGLDQEAL 233
+ G N + L DFY KG++ A +FD++P + + N ++ + L E
Sbjct: 112 LKLGLDSNGCLSEKLFDFYLFKGDLYGAFKVFDEMPERTIFTWNKMIKELASRNLIGEVF 171
Query: 234 ETFRRILTVGLKPNVSTFSSVIPVCTRLGHFCFG--KSLHGFTIKSGYLFDDFLVPALIS 291
F R+++ + PN TFS V+ C R G F + +H + G + LI
Sbjct: 172 GLFVRMVSENVTPNEGTFSGVLEAC-RGGSVAFDVVEQIHARILYQGLRDSTVVCNPLID 230
Query: 292 MYAGDLDLSTARKLFDSLLEKNASVWNAMISAYTQSKKFFEAFEIFRQMIRAEMQPDLVT 351
+Y+ + + AR++FD L K+ S W AMIS ++++ EA +F M + P
Sbjct: 231 LYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYA 290
Query: 352 FVSIIPSCENYCSFQCGESLTACVIKNGLGNQPSVLTALLSMYAKLGNIDSAKFLFDQIP 411
F S++ +C+ S + GE L V+K G + V AL+S+Y LGN+ SA+ +F +
Sbjct: 291 FSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMS 350
Query: 412 NRNLLCWNAMMSAYVRNRFWDASLAVFRQMQFAGLNPDAVSIISVLSGCSKLDDVLLGKS 471
R+ + +N +++ + + + ++ +F++M GL PD+ ++ S++ CS + G+
Sbjct: 351 QRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQ 410
Query: 472 AHAFSLRKGIVSNLDVLNALLMFYSDGGQFSYAFTLFHRMSTRSSVSWNTLISRCVQNGA 531
HA++ + G SN + ALL Y+ A F + V WN ++
Sbjct: 411 LHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDD 470
Query: 532 VEEAVILLQRMQKEGVELDMVTLISFLPNLNKNGNIKQGMVIHGYAIKTGCVADVTFLNA 591
+ + + ++MQ E + + T S L + G+++ G IH IKT + +
Sbjct: 471 LRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSV 530
Query: 592 LITMYCNCGSTNDGRLCLLLFQMGDKREISLWNAIISVYVQTNKAKQAVAFFTELLGAGL 651
LI MY G + L+ F +++ W +I+ Y Q N +A+ F ++L G+
Sbjct: 531 LIDMYAKLGKLDTAWDILIRFA---GKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGI 587
Query: 652 EPDNVTVLSIISAGVLINSLNLTHSLMAFVIRKGLDKHVAVSNALMDSYVRCGNISMARK 711
D V + + +SA + +L + A G + NAL+ Y RCG I +
Sbjct: 588 RSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYL 647
Query: 712 LFGSLIYKDAFSWSVMINGYGLYGDGEAALELFKQMQLSGVRPNEITYLGVLSACSHAGL 771
F D +W+ +++G+ G+ E AL +F +M G+ N T+ + A S
Sbjct: 648 AFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETAN 707
Query: 772 VEQSKMVFKSMVEHGISQKMEHYACMVDLLGRTGHLNEAFIFVKKLPCKPSVSILESLLG 831
++Q K V + + G + E ++ + + G +++A ++ K VS +++
Sbjct: 708 MKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVS-WNAIIN 766
Query: 832 ACRIHG 837
A HG
Sbjct: 767 AYSKHG 772
>sp|Q9M1V3|PP296_ARATH Pentatricopeptide repeat-containing protein At3g63370
OS=Arabidopsis thaliana GN=PCMP-H83 PE=2 SV=2
Length = 960
Score = 419 bits (1077), Expect = e-116, Method: Compositional matrix adjust.
Identities = 244/757 (32%), Positives = 416/757 (54%), Gaps = 16/757 (2%)
Query: 149 TFPFLIKACSSLSDLRIGREIHCVIFRTGYHQNL-VIQTALVDFYAKKGEMLTARLLFDQ 207
F ++++ C + GR++H IF+T L + LV Y K G + A +FD+
Sbjct: 82 AFAYVLELCGKRRAVSQGRQLHSRIFKTFPSFELDFLAGKLVFMYGKCGSLDDAEKVFDE 141
Query: 208 IPLADLVSCNTLMAGYSFNGLDQEALETFRRILTVGLKPNVSTFSSVIPVCTRLGHFCFG 267
+P + NT++ Y NG AL + + G+ +S+F +++ C +L G
Sbjct: 142 MPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLRDIRSG 201
Query: 268 KSLHGFTIKSGYLFDDFLVPALISMYAGDLDLSTARKLFDSLLEK-NASVWNAMISAYTQ 326
LH +K GY F+V AL+SMYA + DLS AR+LFD EK +A +WN+++S+Y+
Sbjct: 202 SELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYST 261
Query: 327 SKKFFEAFEIFRQMIRAEMQPDLVTFVSIIPSCENYCSFQCGESLTACVIKNGL-GNQPS 385
S K E E+FR+M P+ T VS + +C+ + + G+ + A V+K+ ++
Sbjct: 262 SGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSELY 321
Query: 386 VLTALLSMYAKLGNIDSAKFLFDQIPNRNLLCWNAMMSAYVRNRFWDASLAVFRQMQFAG 445
V AL++MY + G + A+ + Q+ N +++ WN+++ YV+N + +L F M AG
Sbjct: 322 VCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAG 381
Query: 446 LNPDAVSIISVLSGCSKLDDVLLGKSAHAFSLRKGIVSNLDVLNALLMFYSDGGQFSYAF 505
D VS+ S+++ +L ++L G HA+ ++ G SNL V N L+ YS Y
Sbjct: 382 HKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMG 441
Query: 506 TLFHRMSTRSSVSWNTLISRCVQNGAVEEAVILLQRMQKEGVELDMVTLISFLPNLNKNG 565
F RM + +SW T+I+ QN EA+ L + + K+ +E+D + L S L +
Sbjct: 442 RAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSIL----RAS 497
Query: 566 NIKQGMVI----HGYAIKTGCVADVTFLNALITMYCNCGSTNDGRLCLLLFQMGDKREIS 621
++ + M+I H + ++ G + D N L+ +Y C + +F+ +++
Sbjct: 498 SVLKSMLIVKEIHCHILRKGLL-DTVIQNELVDVYGKCRNMG---YATRVFESIKGKDVV 553
Query: 622 LWNAIISVYVQTNKAKQAVAFFTELLGAGLEPDNVTVLSIISAGVLINSLNLTHSLMAFV 681
W ++IS +AV F ++ GL D+V +L I+SA +++LN + ++
Sbjct: 554 SWTSMISSSALNGNESEAVELFRRMVETGLSADSVALLCILSAAASLSALNKGREIHCYL 613
Query: 682 IRKGLDKHVAVSNALMDSYVRCGNISMARKLFGSLIYKDAFSWSVMINGYGLYGDGEAAL 741
+RKG +++ A++D Y CG++ A+ +F + K ++ MIN YG++G G+AA+
Sbjct: 614 LRKGFCLEGSIAVAVVDMYACCGDLQSAKAVFDRIERKGLLQYTSMINAYGMHGCGKAAV 673
Query: 742 ELFKQMQLSGVRPNEITYLGVLSACSHAGLVEQSKMVFKSMV-EHGISQKMEHYACMVDL 800
ELF +M+ V P+ I++L +L ACSHAGL+++ + K M E+ + EHY C+VD+
Sbjct: 674 ELFDKMRHENVSPDHISFLALLYACSHAGLLDEGRGFLKIMEHEYELEPWPEHYVCLVDM 733
Query: 801 LGRTGHLNEAFIFVKKLPCKPSVSILESLLGACRIHGNVELGEIISGMLFEMDPENPGSY 860
LGR + EAF FVK + +P+ + +LL ACR H E+GEI + L E++P+NPG+
Sbjct: 734 LGRANCVVEAFEFVKMMKTEPTAEVWCALLAACRSHSEKEIGEIAAQRLLELEPKNPGNL 793
Query: 861 VMLHNIYASAGRWEDAYRVRSCMKRSRLKKVPGFSLV 897
V++ N++A GRW D +VR+ MK S ++K PG S +
Sbjct: 794 VLVSNVFAEQGRWNDVEKVRAKMKASGMEKHPGCSWI 830
Score = 243 bits (620), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 161/554 (29%), Positives = 263/554 (47%), Gaps = 6/554 (1%)
Query: 113 FLQNLMIRGLSNCGLHADLLHVYIKCRLSGCPSDDFTFPFLIKACSSLSDLRIGREIHCV 172
F N MI + G A L +Y R+ G P +FP L+KAC+ L D+R G E+H +
Sbjct: 148 FAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLRDIRSGSELHSL 207
Query: 173 IFRTGYHQNLVIQTALVDFYAKKGEMLTARLLFDQI-PLADLVSCNTLMAGYSFNGLDQE 231
+ + GYH I ALV YAK ++ AR LFD D V N++++ YS +G E
Sbjct: 208 LVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYSTSGKSLE 267
Query: 232 ALETFRRILTVGLKPNVSTFSSVIPVCTRLGHFCFGKSLHGFTIKSGYLFDDFLV-PALI 290
LE FR + G PN T S + C + GK +H +KS + V ALI
Sbjct: 268 TLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSELYVCNALI 327
Query: 291 SMYAGDLDLSTARKLFDSLLEKNASVWNAMISAYTQSKKFFEAFEIFRQMIRAEMQPDLV 350
+MY + A ++ + + WN++I Y Q+ + EA E F MI A + D V
Sbjct: 328 AMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEV 387
Query: 351 TFVSIIPSCENYCSFQCGESLTACVIKNGLGNQPSVLTALLSMYAKLGNIDSAKFLFDQI 410
+ SII + + G L A VIK+G + V L+ MY+K F ++
Sbjct: 388 SMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRM 447
Query: 411 PNRNLLCWNAMMSAYVRNRFWDASLAVFRQMQFAGLNPDAVSIISVLSGCSKLDDVLLGK 470
+++L+ W +++ Y +N +L +FR + + D + + S+L S L +L+ K
Sbjct: 448 HDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRASSVLKSMLIVK 507
Query: 471 SAHAFSLRKGIVSNLDVLNALLMFYSDGGQFSYAFTLFHRMSTRSSVSWNTLISRCVQNG 530
H LRKG++ + + N L+ Y YA +F + + VSW ++IS NG
Sbjct: 508 EIHCHILRKGLLDTV-IQNELVDVYGKCRNMGYATRVFESIKGKDVVSWTSMISSSALNG 566
Query: 531 AVEEAVILLQRMQKEGVELDMVTLISFLPNLNKNGNIKQGMVIHGYAIKTGCVADVTFLN 590
EAV L +RM + G+ D V L+ L + +G IH Y ++ G + +
Sbjct: 567 NESEAVELFRRMVETGLSADSVALLCILSAAASLSALNKGREIHCYLLRKGFCLEGSIAV 626
Query: 591 ALITMYCNCGSTNDGRLCLLLFQMGDKREISLWNAIISVYVQTNKAKQAVAFFTELLGAG 650
A++ MY CG + +F +++ + + ++I+ Y K AV F ++
Sbjct: 627 AVVDMYACCGDLQSAK---AVFDRIERKGLLQYTSMINAYGMHGCGKAAVELFDKMRHEN 683
Query: 651 LEPDNVTVLSIISA 664
+ PD+++ L+++ A
Sbjct: 684 VSPDHISFLALLYA 697
Score = 241 bits (615), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 177/620 (28%), Positives = 305/620 (49%), Gaps = 19/620 (3%)
Query: 225 FNGLDQEALETFRRILTVGLKPNVSTFSSVIPVCTRLGHFCFGKSLHGFTIKSGYLFD-D 283
F+G+ EA F+R+ V F+ V+ +C + G+ LH K+ F+ D
Sbjct: 60 FDGVLTEA---FQRLDVSENNSPVEAFAYVLELCGKRRAVSQGRQLHSRIFKTFPSFELD 116
Query: 284 FLVPALISMYAGDLDLSTARKLFDSLLEKNASVWNAMISAYTQSKKFFEAFEIFRQMIRA 343
FL L+ MY L A K+FD + ++ A WN MI AY + + A ++ M R
Sbjct: 117 FLAGKLVFMYGKCGSLDDAEKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNM-RV 175
Query: 344 EMQP-DLVTFVSIIPSCENYCSFQCGESLTACVIKNGLGNQPSVLTALLSMYAKLGNIDS 402
E P L +F +++ +C + G L + ++K G + ++ AL+SMYAK ++ +
Sbjct: 176 EGVPLGLSSFPALLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSA 235
Query: 403 AKFLFDQIPNR-NLLCWNAMMSAYVRNRFWDASLAVFRQMQFAGLNPDAVSIISVLSGCS 461
A+ LFD + + + WN+++S+Y + +L +FR+M G P++ +I+S L+ C
Sbjct: 236 ARRLFDGFQEKGDAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACD 295
Query: 462 KLDDVLLGKSAHAFSLRKGI-VSNLDVLNALLMFYSDGGQFSYAFTLFHRMSTRSSVSWN 520
LGK HA L+ S L V NAL+ Y+ G+ A + +M+ V+WN
Sbjct: 296 GFSYAKLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWN 355
Query: 521 TLISRCVQNGAVEEAVILLQRMQKEGVELDMVTLISFLPNLNKNGNIKQGMVIHGYAIKT 580
+LI VQN +EA+ M G + D V++ S + + N+ GM +H Y IK
Sbjct: 356 SLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKH 415
Query: 581 GCVADVTFLNALITMYCNCGSTNDGRLCLL---LFQMGDKREISLWNAIISVYVQTNKAK 637
G +++ N LI MY C T C + +M DK IS W +I+ Y Q +
Sbjct: 416 GWDSNLQVGNTLIDMYSKCNLT-----CYMGRAFLRMHDKDLIS-WTTVIAGYAQNDCHV 469
Query: 638 QAVAFFTELLGAGLEPDNVTVLSIISAGVLINSLNLTHSLMAFVIRKGLDKHVAVSNALM 697
+A+ F ++ +E D + + SI+ A ++ S+ + + ++RKGL V + N L+
Sbjct: 470 EALELFRDVAKKRMEIDEMILGSILRASSVLKSMLIVKEIHCHILRKGLLDTV-IQNELV 528
Query: 698 DSYVRCGNISMARKLFGSLIYKDAFSWSVMINGYGLYGDGEAALELFKQMQLSGVRPNEI 757
D Y +C N+ A ++F S+ KD SW+ MI+ L G+ A+ELF++M +G+ + +
Sbjct: 529 DVYGKCRNMGYATRVFESIKGKDVVSWTSMISSSALNGNESEAVELFRRMVETGLSADSV 588
Query: 758 TYLGVLSACSHAGLVEQSKMVFKSMVEHGISQKMEHYACMVDLLGRTGHLNEAFIFVKKL 817
L +LSA + + + + + ++ G + +VD+ G L A ++
Sbjct: 589 ALLCILSAAASLSALNKGREIHCYLLRKGFCLEGSIAVAVVDMYACCGDLQSAKAVFDRI 648
Query: 818 PCKPSVSILESLLGACRIHG 837
K + S++ A +HG
Sbjct: 649 ERKGLLQYT-SMINAYGMHG 667
>sp|Q7XJN6|PP197_ARATH Pentatricopeptide repeat-containing protein At2g40720
OS=Arabidopsis thaliana GN=PCMP-E26 PE=3 SV=1
Length = 860
Score = 410 bits (1054), Expect = e-113, Method: Compositional matrix adjust.
Identities = 266/800 (33%), Positives = 422/800 (52%), Gaps = 25/800 (3%)
Query: 116 NLMIRGLSNCGLHADLLHVYIKCRLSGCP--SDDFTFPFLIKACSSLSDLRIGREIHCVI 173
N IR L G + LH+Y K S P + FTFP L+KACS+L++L G+ IH +
Sbjct: 28 NSGIRALIQKGEYLQALHLYSKHDGSS-PFWTSVFTFPSLLKACSALTNLSYGKTIHGSV 86
Query: 174 FRTGYHQNLVIQTALVDFYAKKGEMLTARLLFDQ-------IPLADLVSCNTLMAGYSFN 226
G+ + I T+LV+ Y K G + A +FD + D+ N+++ GY
Sbjct: 87 VVLGWRYDPFIATSLVNMYVKCGFLDYAVQVFDGWSQSQSGVSARDVTVWNSMIDGYFKF 146
Query: 227 GLDQEALETFRRILTVGLKPNVSTFSSVIPVCTRLGHFCF--GKSLHGFTIKSGYLFDDF 284
+E + FRR+L G++P+ + S V+ V + G+F GK +HGF +++ D F
Sbjct: 147 RRFKEGVGCFRRMLVFGVRPDAFSLSIVVSVMCKEGNFRREEGKQIHGFMLRNSLDTDSF 206
Query: 285 LVPALISMYAG-DLDLSTARKLFDSLLEKNASVWNAMISAYTQSKKFFEAFEIFRQMIRA 343
L ALI MY L + R + + N +WN MI + S + +++
Sbjct: 207 LKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLWNVMIVGFGGSGICESSLDLYMLAKNN 266
Query: 344 EMQPDLVTFVSIIPSCENYCSFQCGESLTACVIKNGLGNQPSVLTALLSMYAKLGNIDSA 403
++ +F + +C + G + V+K GL N P V T+LLSMY+K G + A
Sbjct: 267 SVKLVSTSFTGALGACSQSENSGFGRQIHCDVVKMGLHNDPYVCTSLLSMYSKCGMVGEA 326
Query: 404 KFLFDQIPNRNLLCWNAMMSAYVRNRFWDASLAVFRQMQFAGLNPDAVSIISVLSGCSKL 463
+ +F + ++ L WNAM++AY N + ++L +F M+ + PD+ ++ +V+S CS L
Sbjct: 327 ETVFSCVVDKRLEIWNAMVAAYAENDYGYSALDLFGFMRQKSVLPDSFTLSNVISCCSVL 386
Query: 464 DDVLLGKSAHAFSLRKGIVSNLDVLNALLMFYSDGGQFSYAFTLFHRMSTRSSVSWNTLI 523
GKS HA ++ I S + +ALL YS G A+ +F M + V+W +LI
Sbjct: 387 GLYNYGKSVHAELFKRPIQSTSTIESALLTLYSKCGCDPDAYLVFKSMEEKDMVAWGSLI 446
Query: 524 SRCVQNGAVEEAVILLQRMQKEGVELD-----MVTLISFLPNLNKNGNIKQGMVIHGYAI 578
S +NG +EA+ + M+ + L M ++ + L ++ G+ +HG I
Sbjct: 447 SGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVTNACAGLEA---LRFGLQVHGSMI 503
Query: 579 KTGCVADVTFLNALITMYCNCGSTNDGRLCLLLFQMGDKREISLWNAIISVYVQTNKAKQ 638
KTG V +V ++LI +Y CG + L +F + WN++IS Y + N +
Sbjct: 504 KTGLVLNVFVGSSLIDLYSKCGLP---EMALKVFTSMSTENMVAWNSMISCYSRNNLPEL 560
Query: 639 AVAFFTELLGAGLEPDNVTVLSIISAGVLINSLNLTHSLMAFVIRKGLDKHVAVSNALMD 698
++ F +L G+ PD+V++ S++ A SL SL + +R G+ + NAL+D
Sbjct: 561 SIDLFNLMLSQGIFPDSVSITSVLVAISSTASLLKGKSLHGYTLRLGIPSDTHLKNALID 620
Query: 699 SYVRCGNISMARKLFGSLIYKDAFSWSVMINGYGLYGDGEAALELFKQMQLSGVRPNEIT 758
YV+CG A +F + +K +W++MI GYG +GD AL LF +M+ +G P+++T
Sbjct: 621 MYVKCGFSKYAENIFKKMQHKSLITWNLMIYGYGSHGDCITALSLFDEMKKAGESPDDVT 680
Query: 759 YLGVLSACSHAGLVEQSKMVFKSMVE-HGISQKMEHYACMVDLLGRTGHLNEAFIFVKKL 817
+L ++SAC+H+G VE+ K +F+ M + +GI MEHYA MVDLLGR G L EA+ F+K +
Sbjct: 681 FLSLISACNHSGFVEEGKNIFEFMKQDYGIEPNMEHYANMVDLLGRAGLLEEAYSFIKAM 740
Query: 818 PCKPSVSILESLLGACRIHGNVELGEIISGMLFEMDPENPGSYVMLHNIYASAGRWEDAY 877
P + SI LL A R H NVELG + + L M+PE +YV L N+Y AG +A
Sbjct: 741 PIEADSSIWLCLLSASRTHHNVELGILSAEKLLRMEPERGSTYVQLINLYMEAGLKNEAA 800
Query: 878 RVRSCMKRSRLKKVPGFSLV 897
++ MK L K PG S +
Sbjct: 801 KLLGLMKEKGLHKQPGCSWI 820
Score = 209 bits (532), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 140/467 (29%), Positives = 233/467 (49%), Gaps = 2/467 (0%)
Query: 106 IIKKPCVFLQNLMIRGLSNCGLHADLLHVYIKCRLSGCPSDDFTFPFLIKACSSLSDLRI 165
I K V L N+MI G G+ L +Y+ + + +F + ACS +
Sbjct: 231 IEDKSNVVLWNVMIVGFGGSGICESSLDLYMLAKNNSVKLVSTSFTGALGACSQSENSGF 290
Query: 166 GREIHCVIFRTGYHQNLVIQTALVDFYAKKGEMLTARLLFDQIPLADLVSCNTLMAGYSF 225
GR+IHC + + G H + + T+L+ Y+K G + A +F + L N ++A Y+
Sbjct: 291 GRQIHCDVVKMGLHNDPYVCTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYAE 350
Query: 226 NGLDQEALETFRRILTVGLKPNVSTFSSVIPVCTRLGHFCFGKSLHGFTIKSGYLFDDFL 285
N AL+ F + + P+ T S+VI C+ LG + +GKS+H K +
Sbjct: 351 NDYGYSALDLFGFMRQKSVLPDSFTLSNVISCCSVLGLYNYGKSVHAELFKRPIQSTSTI 410
Query: 286 VPALISMYAGDLDLSTARKLFDSLLEKNASVWNAMISAYTQSKKFFEAFEIFRQMIRAE- 344
AL+++Y+ A +F S+ EK+ W ++IS ++ KF EA ++F M +
Sbjct: 411 ESALLTLYSKCGCDPDAYLVFKSMEEKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDDD 470
Query: 345 -MQPDLVTFVSIIPSCENYCSFQCGESLTACVIKNGLGNQPSVLTALLSMYAKLGNIDSA 403
++PD S+ +C + + G + +IK GL V ++L+ +Y+K G + A
Sbjct: 471 SLKPDSDIMTSVTNACAGLEALRFGLQVHGSMIKTGLVLNVFVGSSLIDLYSKCGLPEMA 530
Query: 404 KFLFDQIPNRNLLCWNAMMSAYVRNRFWDASLAVFRQMQFAGLNPDAVSIISVLSGCSKL 463
+F + N++ WN+M+S Y RN + S+ +F M G+ PD+VSI SVL S
Sbjct: 531 LKVFTSMSTENMVAWNSMISCYSRNNLPELSIDLFNLMLSQGIFPDSVSITSVLVAISST 590
Query: 464 DDVLLGKSAHAFSLRKGIVSNLDVLNALLMFYSDGGQFSYAFTLFHRMSTRSSVSWNTLI 523
+L GKS H ++LR GI S+ + NAL+ Y G YA +F +M +S ++WN +I
Sbjct: 591 ASLLKGKSLHGYTLRLGIPSDTHLKNALIDMYVKCGFSKYAENIFKKMQHKSLITWNLMI 650
Query: 524 SRCVQNGAVEEAVILLQRMQKEGVELDMVTLISFLPNLNKNGNIKQG 570
+G A+ L M+K G D VT +S + N +G +++G
Sbjct: 651 YGYGSHGDCITALSLFDEMKKAGESPDDVTFLSLISACNHSGFVEEG 697
>sp|Q9SS83|PP220_ARATH Pentatricopeptide repeat-containing protein At3g09040,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E88 PE=2
SV=1
Length = 1028
Score = 406 bits (1043), Expect = e-112, Method: Compositional matrix adjust.
Identities = 229/724 (31%), Positives = 391/724 (54%), Gaps = 6/724 (0%)
Query: 177 GYHQNLVIQTALVDFYAKKGEMLTARLLFDQIPLADLVSCNTLMAGYSFNGLDQEALETF 236
G+ + + +++ Y + G++ ARLLF ++ D+V+ N +++G+ G + A+E F
Sbjct: 256 GHRPDHLAFVTVINTYIRLGKLKDARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYF 315
Query: 237 RRILTVGLKPNVSTFSSVIPVCTRLGHFCFGKSLHGFTIKSGYLFDDFLVPALISMYAGD 296
+ +K ST SV+ + + G +H IK G + ++ +L+SMY+
Sbjct: 316 FNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKC 375
Query: 297 LDLSTARKLFDSLLEKNASVWNAMISAYTQSKKFFEAFEIFRQMIRAEMQPDLVTFVSII 356
+ A K+F++L EKN WNAMI Y + + + E+F M + D TF S++
Sbjct: 376 EKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLL 435
Query: 357 PSCENYCSFQCGESLTACVIKNGLGNQPSVLTALLSMYAKLGNIDSAKFLFDQIPNRNLL 416
+C + G + +IK L V AL+ MYAK G ++ A+ +F+++ +R+ +
Sbjct: 436 STCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERMCDRDNV 495
Query: 417 CWNAMMSAYVRNRFWDASLAVFRQMQFAGLNPDAVSIISVLSGCSKLDDVLLGKSAHAFS 476
WN ++ +YV++ + +F++M G+ D + S L C+ + + GK H S
Sbjct: 496 TWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQVHCLS 555
Query: 477 LRKGIVSNLDVLNALLMFYSDGGQFSYAFTLFHRMSTRSSVSWNTLISRCVQNGAVEEAV 536
++ G+ +L ++L+ YS G A +F + S VS N LI+ QN +EEAV
Sbjct: 556 VKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSMNALIAGYSQNN-LEEAV 614
Query: 537 ILLQRMQKEGVELDMVTLISFLPNLNKNGNIKQGMVIHGYAIKTGCVADVTFLN-ALITM 595
+L Q M GV +T + + +K ++ G HG K G ++ +L +L+ M
Sbjct: 615 VLFQEMLTRGVNPSEITFATIVEACHKPESLTLGTQFHGQITKRGFSSEGEYLGISLLGM 674
Query: 596 YCNCGSTNDGRLCLLLFQMGDKREISLWNAIISVYVQTNKAKQAVAFFTELLGAGLEPDN 655
Y N + C L ++ + I LW ++S + Q ++A+ F+ E+ G+ PD
Sbjct: 675 YMNSRGMTEA--CALFSELSSPKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGVLPDQ 732
Query: 656 VTVLSIISAGVLINSLNLTHSLMAFVIRKGLDKHVAVSNALMDSYVRCGNISMARKLFGS 715
T ++++ +++SL ++ + + D SN L+D Y +CG++ + ++F
Sbjct: 733 ATFVTVLRVCSVLSSLREGRAIHSLIFHLAHDLDELTSNTLIDMYAKCGDMKGSSQVFDE 792
Query: 716 LIYK-DAFSWSVMINGYGLYGDGEAALELFKQMQLSGVRPNEITYLGVLSACSHAGLVEQ 774
+ + + SW+ +INGY G E AL++F M+ S + P+EIT+LGVL+ACSHAG V
Sbjct: 793 MRRRSNVVSWNSLINGYAKNGYAEDALKIFDSMRQSHIMPDEITFLGVLTACSHAGKVSD 852
Query: 775 SKMVFKSMV-EHGISQKMEHYACMVDLLGRTGHLNEAFIFVKKLPCKPSVSILESLLGAC 833
+ +F+ M+ ++GI +++H ACMVDLLGR G+L EA F++ KP + SLLGAC
Sbjct: 853 GRKIFEMMIGQYGIEARVDHVACMVDLLGRWGYLQEADDFIEAQNLKPDARLWSSLLGAC 912
Query: 834 RIHGNVELGEIISGMLFEMDPENPGSYVMLHNIYASAGRWEDAYRVRSCMKRSRLKKVPG 893
RIHG+ GEI + L E++P+N +YV+L NIYAS G WE A +R M+ +KKVPG
Sbjct: 913 RIHGDDIRGEISAEKLIELEPQNSSAYVLLSNIYASQGCWEKANALRKVMRDRGVKKVPG 972
Query: 894 FSLV 897
+S +
Sbjct: 973 YSWI 976
Score = 253 bits (647), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 189/672 (28%), Positives = 310/672 (46%), Gaps = 46/672 (6%)
Query: 100 ALSSFPIIKKPCVFLQNLMIRGLSNCGLHADLLHVYIKCRLSGCPSDDFTFPFLIKACSS 159
A F ++K V N M+ S+ G +L ++ + + FTF ++ C+
Sbjct: 114 AEKQFDFLEKD-VTAWNSMLSMYSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCAR 172
Query: 160 LSDLRIGREIHCVIFRTGYHQNLVIQTALVDFYAKKGEMLTARLLFDQIPLADLVSCNTL 219
+++ GR+IHC + + G +N ALVD YAK + AR +F+ I + V L
Sbjct: 173 ETNVEFGRQIHCSMIKMGLERNSYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCL 232
Query: 220 MAGYSFNGLDQEALETFRRILTVGLKPNVSTFSSVIPVCTRLGHFCFGKSLHGFTIKSGY 279
+GY GL +EA+ F R+ G +P+ F +VI RLG
Sbjct: 233 FSGYVKAGLPEEAVLVFERMRDEGHRPDHLAFVTVINTYIRLGK---------------- 276
Query: 280 LFDDFLVPALISMYAGDLDLSTARKLFDSLLEKNASVWNAMISAYTQSKKFFEAFEIFRQ 339
L AR LF + + WN MIS + + A E F
Sbjct: 277 -------------------LKDARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFN 317
Query: 340 MIRAEMQPDLVTFVSIIPSCENYCSFQCGESLTACVIKNGLGNQPSVLTALLSMYAKLGN 399
M ++ ++ T S++ + + G + A IK GL + V ++L+SMY+K
Sbjct: 318 MRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEK 377
Query: 400 IDSAKFLFDQIPNRNLLCWNAMMSAYVRNRFWDASLAVFRQMQFAGLNPDAVSIISVLSG 459
+++A +F+ + +N + WNAM+ Y N + +F M+ +G N D + S+LS
Sbjct: 378 MEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLST 437
Query: 460 CSKLDDVLLGKSAHAFSLRKGIVSNLDVLNALLMFYSDGGQFSYAFTLFHRMSTRSSVSW 519
C+ D+ +G H+ ++K + NL V NAL+ Y+ G A +F RM R +V+W
Sbjct: 438 CAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERMCDRDNVTW 497
Query: 520 NTLISRCVQNGAVEEAVILLQRMQKEGVELDMVTLISFLPNLNKNGNIKQGMVIHGYAIK 579
NT+I VQ+ EA L +RM G+ D L S L + QG +H ++K
Sbjct: 498 NTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQVHCLSVK 557
Query: 580 TGCVADVTFLNALITMYCNCGSTNDGRLCLLLFQMGDKREISLWNAIISVYVQTNKAKQA 639
G D+ ++LI MY CG D R +F + + NA+I+ Y Q N ++A
Sbjct: 558 CGLDRDLHTGSSLIDMYSKCGIIKDAR---KVFSSLPEWSVVSMNALIAGYSQNN-LEEA 613
Query: 640 VAFFTELLGAGLEPDNVTVLSIISAGVLINSLNLTHSLMAFVIRKGLD---KHVAVSNAL 696
V F E+L G+ P +T +I+ A SL L + ++G +++ +S L
Sbjct: 614 VVLFQEMLTRGVNPSEITFATIVEACHKPESLTLGTQFHGQITKRGFSSEGEYLGIS--L 671
Query: 697 MDSYVRCGNISMARKLFGSLIY-KDAFSWSVMINGYGLYGDGEAALELFKQMQLSGVRPN 755
+ Y+ ++ A LF L K W+ M++G+ G E AL+ +K+M+ GV P+
Sbjct: 672 LGMYMNSRGMTEACALFSELSSPKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGVLPD 731
Query: 756 EITYLGVLSACS 767
+ T++ VL CS
Sbjct: 732 QATFVTVLRVCS 743
Score = 239 bits (610), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 167/640 (26%), Positives = 294/640 (45%), Gaps = 42/640 (6%)
Query: 163 LRIGREIHCVIFRTGYHQNLVIQTALVDFYAKKGEMLTARLLFDQIPLADLVSCNTLMAG 222
LRIG+ +H G + A+VD YAK ++ A FD + D+ + N++++
Sbjct: 76 LRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFDFLE-KDVTAWNSMLSM 134
Query: 223 YSFNGLDQEALETFRRILTVGLKPNVSTFSSVIPVCTRLGHFCFGKSLHGFTIKSGYLFD 282
YS G + L +F + + PN TFS V+ C R + FG+ +H IK G +
Sbjct: 135 YSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLERN 194
Query: 283 DFLVPALISMYAGDLDLSTARKLFDSLLEKNASVWNAMISAYTQSKKFFEAFEIFRQMIR 342
+ AL+ MYA +S AR++F+ +++ N W + S Y ++ EA +F +M
Sbjct: 195 SYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRD 254
Query: 343 AEMQPDLVTFVSIIPSCENYCSFQCGESLTACVIKNGLGNQPSVLTALLSMYAKLGNIDS 402
+PD + FV++I + Y +LG +
Sbjct: 255 EGHRPDHLAFVTVINT-----------------------------------YIRLGKLKD 279
Query: 403 AKFLFDQIPNRNLLCWNAMMSAYVRNRFWDASLAVFRQMQFAGLNPDAVSIISVLSGCSK 462
A+ LF ++ + +++ WN M+S + + ++ F M+ + + ++ SVLS
Sbjct: 280 ARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGI 339
Query: 463 LDDVLLGKSAHAFSLRKGIVSNLDVLNALLMFYSDGGQFSYAFTLFHRMSTRSSVSWNTL 522
+ ++ LG HA +++ G+ SN+ V ++L+ YS + A +F + ++ V WN +
Sbjct: 340 VANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAM 399
Query: 523 ISRCVQNGAVEEAVILLQRMQKEGVELDMVTLISFLPNLNKNGNIKQGMVIHGYAIKTGC 582
I NG + + L M+ G +D T S L + +++ G H IK
Sbjct: 400 IRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKL 459
Query: 583 VADVTFLNALITMYCNCGSTNDGRLCLLLFQMGDKREISLWNAIISVYVQTNKAKQAVAF 642
++ NAL+ MY CG+ D R + +M D+ ++ WN II YVQ +A
Sbjct: 460 AKNLFVGNALVDMYAKCGALEDAR--QIFERMCDRDNVT-WNTIIGSYVQDENESEAFDL 516
Query: 643 FTELLGAGLEPDNVTVLSIISAGVLINSLNLTHSLMAFVIRKGLDKHVAVSNALMDSYVR 702
F + G+ D + S + A ++ L + ++ GLD+ + ++L+D Y +
Sbjct: 517 FKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSK 576
Query: 703 CGNISMARKLFGSLIYKDAFSWSVMINGYGLYGDGEAALELFKQMQLSGVRPNEITYLGV 762
CG I ARK+F SL S + +I GY + E A+ LF++M GV P+EIT+ +
Sbjct: 577 CGIIKDARKVFSSLPEWSVVSMNALIAGYS-QNNLEEAVVLFQEMLTRGVNPSEITFATI 635
Query: 763 LSACSHAGLVEQSKMVFKSMVEHGISQKMEHYACMVDLLG 802
+ AC + + + G S + E+ + LLG
Sbjct: 636 VEACHKPESLTLGTQFHGQITKRGFSSEGEYLG--ISLLG 673
Score = 230 bits (586), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 172/708 (24%), Positives = 328/708 (46%), Gaps = 16/708 (2%)
Query: 104 FPIIKKPCVFLQNLMIRGLSNCGLHADLLHVYIKCRLSGCPSDDFTFPFLIKACSSLSDL 163
F + P V N+MI G G + + R S S T ++ A +++L
Sbjct: 284 FGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANL 343
Query: 164 RIGREIHCVIFRTGYHQNLVIQTALVDFYAKKGEMLTARLLFDQIPLADLVSCNTLMAGY 223
+G +H + G N+ + ++LV Y+K +M A +F+ + + V N ++ GY
Sbjct: 344 DLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGY 403
Query: 224 SFNGLDQEALETFRRILTVGLKPNVSTFSSVIPVCTRLGHFCFGKSLHGFTIKSGYLFDD 283
+ NG + +E F + + G + TF+S++ C G H IK +
Sbjct: 404 AHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNL 463
Query: 284 FLVPALISMYAGDLDLSTARKLFDSLLEKNASVWNAMISAYTQSKKFFEAFEIFRQMIRA 343
F+ AL+ MYA L AR++F+ + +++ WN +I +Y Q + EAF++F++M
Sbjct: 464 FVGNALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLC 523
Query: 344 EMQPDLVTFVSIIPSCENYCSFQCGESLTACVIKNGLGNQPSVLTALLSMYAKLGNIDSA 403
+ D S + +C + G+ + +K GL ++L+ MY+K G I A
Sbjct: 524 GIVSDGACLASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDA 583
Query: 404 KFLFDQIPNRNLLCWNAMMSAYVRNRFWDASLAVFRQMQFAGLNPDAVSIISVLSGCSKL 463
+ +F +P +++ NA+++ Y +N +A + +F++M G+NP ++ +++ C K
Sbjct: 584 RKVFSSLPEWSVVSMNALIAGYSQNNLEEA-VVLFQEMLTRGVNPSEITFATIVEACHKP 642
Query: 464 DDVLLGKSAHAFSLRKGIVSNLDVLN-ALLMFYSDGGQFSYAFTLFHRMST-RSSVSWNT 521
+ + LG H ++G S + L +LL Y + + A LF +S+ +S V W
Sbjct: 643 ESLTLGTQFHGQITKRGFSSEGEYLGISLLGMYMNSRGMTEACALFSELSSPKSIVLWTG 702
Query: 522 LISRCVQNGAVEEAVILLQRMQKEGVELDMVTLISFLPNLNKNGNIKQGMVIHGYAIKTG 581
++S QNG EEA+ + M+ +GV D T ++ L + ++++G IH
Sbjct: 703 MMSGHSQNGFYEEALKFYKEMRHDGVLPDQATFVTVLRVCSVLSSLREGRAIHSLIFHLA 762
Query: 582 CVADVTFLNALITMYCNCGSTNDGRLCLLLFQMGDKREISLWNAIISVYVQTNKAKQAVA 641
D N LI MY CG + +M + + WN++I+ Y + A+ A+
Sbjct: 763 HDLDELTSNTLIDMYAKCGDMKGS--SQVFDEMRRRSNVVSWNSLINGYAKNGYAEDALK 820
Query: 642 FFTELLGAGLEPDNVTVLSIISAGVLINSLNLTHSLMAFVIRK-GLDKHVAVSNALMDSY 700
F + + + PD +T L +++A ++ + +I + G++ V ++D
Sbjct: 821 IFDSMRQSHIMPDEITFLGVLTACSHAGKVSDGRKIFEMMIGQYGIEARVDHVACMVDLL 880
Query: 701 VRCGNISMARKLFGSLIYK-DAFSWSVMINGYGLYGD---GEAALELFKQMQLSGVRPNE 756
R G + A + K DA WS ++ ++GD GE + E +++ N
Sbjct: 881 GRWGYLQEADDFIEAQNLKPDARLWSSLLGACRIHGDDIRGEISAEKLIELE----PQNS 936
Query: 757 ITYLGVLSACSHAGLVEQSKMVFKSMVEHGISQKMEHYACMVDLLGRT 804
Y+ + + + G E++ + K M + G+ +K+ Y+ +D+ RT
Sbjct: 937 SAYVLLSNIYASQGCWEKANALRKVMRDRGV-KKVPGYS-WIDVEQRT 982
Score = 215 bits (548), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 143/559 (25%), Positives = 260/559 (46%), Gaps = 39/559 (6%)
Query: 267 GKSLHGFTIKSGYLFDDFLVPALISMYAGDLDLSTARKLFDSLLEKNASVWNAMISAYTQ 326
GK++H ++ G + L A++ +YA +S A K FD LEK+ + WN+M+S Y+
Sbjct: 79 GKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFD-FLEKDVTAWNSMLSMYSS 137
Query: 327 SKKFFEAFEIFRQMIRAEMQPDLVTFVSIIPSCENYCSFQCGESLTACVIKNGLGNQPSV 386
K + F + ++ P+ TF ++ +C + + G + +IK GL
Sbjct: 138 IGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLERNSYC 197
Query: 387 LTALLSMYAKLGNIDSAKFLFDQIPNRNLLCWNAMMSAYVRNRFWDASLAVFRQMQFAGL 446
AL+ MYAK I A+ +F+ I + N +CW + S YV+ + ++ VF +M+ G
Sbjct: 198 GGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRDEGH 257
Query: 447 NPDAVSIISVLSGCSKLDDVLLGKSAHAFSLRKGIVSNLDVLNALLMFYSDGGQFSYAFT 506
PD ++ ++V++ +L G+ A
Sbjct: 258 RPDHLAFVTVINTYIRL-----------------------------------GKLKDARL 282
Query: 507 LFHRMSTRSSVSWNTLISRCVQNGAVEEAVILLQRMQKEGVELDMVTLISFLPNLNKNGN 566
LF MS+ V+WN +IS + G A+ M+K V+ TL S L + N
Sbjct: 283 LFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVAN 342
Query: 567 IKQGMVIHGYAIKTGCVADVTFLNALITMYCNCGSTNDGRLCLLLFQMGDKREISLWNAI 626
+ G+V+H AIK G +++ ++L++MY C +F+ +++ WNA+
Sbjct: 343 LDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKM---EAAAKVFEALEEKNDVFWNAM 399
Query: 627 ISVYVQTNKAKQAVAFFTELLGAGLEPDNVTVLSIISAGVLINSLNLTHSLMAFVIRKGL 686
I Y ++ + + F ++ +G D+ T S++S + L + + +I+K L
Sbjct: 400 IRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKL 459
Query: 687 DKHVAVSNALMDSYVRCGNISMARKLFGSLIYKDAFSWSVMINGYGLYGDGEAALELFKQ 746
K++ V NAL+D Y +CG + AR++F + +D +W+ +I Y + A +LFK+
Sbjct: 460 AKNLFVGNALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLFKR 519
Query: 747 MQLSGVRPNEITYLGVLSACSHAGLVEQSKMVFKSMVEHGISQKMEHYACMVDLLGRTGH 806
M L G+ + L AC+H + Q K V V+ G+ + + + ++D+ + G
Sbjct: 520 MNLCGIVSDGACLASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGI 579
Query: 807 LNEAFIFVKKLPCKPSVSI 825
+ +A LP VS+
Sbjct: 580 IKDARKVFSSLPEWSVVSM 598
Score = 134 bits (338), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 118/552 (21%), Positives = 245/552 (44%), Gaps = 69/552 (12%)
Query: 277 SGYLFDDFLVPALISMYAGDLDLSTARKLFDSLLEKNASVWNAMISAYTQSKKFFEAFEI 336
S +FD F +S Y+ DL R+++ +L + + ++ K F++ ++
Sbjct: 10 SSAMFDSFSFVRRLS-YSPDL----GRRIYGHVLPSHDQIHQRLLEICLGQCKLFKSRKV 64
Query: 337 FRQMIRAEMQPDLVTFVSIIPSCENYCSFQCGESLTACVIKNGLGNQPSVLTALLSMYAK 396
F +M P + + + G+++ + + G+ ++ + A++ +YAK
Sbjct: 65 FDEM------PQRLAL-----------ALRIGKAVHSKSLILGIDSEGRLGNAIVDLYAK 107
Query: 397 LGNIDSAKFLFDQIPNRNLLCWNAMMSAYVR----NRFWDASLAVFRQMQFAGLNPDAVS 452
+ A+ FD + +++ WN+M+S Y + + +++F F P+ +
Sbjct: 108 CAQVSYAEKQFDFL-EKDVTAWNSMLSMYSSIGKPGKVLRSFVSLFENQIF----PNKFT 162
Query: 453 IISVLSGCSKLDDVLLGKSAHAFSLRKGIVSNLDVLNALLMFYSDGGQFSYAFTLFHRMS 512
VLS C++ +V G+ H ++ G+ N AL+ Y+ + S A +F +
Sbjct: 163 FSIVLSTCARETNVEFGRQIHCSMIKMGLERNSYCGGALVDMYAKCDRISDARRVFEWIV 222
Query: 513 TRSSVSWNTLISRCVQNGAVEEAVILLQRMQKEGVELDMVTLISFLPNLNKNGNIKQGMV 572
++V W L S V+ G EEAV++ +RM+ EG D + ++
Sbjct: 223 DPNTVCWTCLFSGYVKAGLPEEAVLVFERMRDEGHRPDHLAFVT---------------- 266
Query: 573 IHGYAIKTGCVADVTFLNALITMYCNCGSTNDGRLCLLLFQMGDKREISLWNAIISVYVQ 632
+I Y G D R LLF ++ WN +IS + +
Sbjct: 267 -------------------VINTYIRLGKLKDAR---LLFGEMSSPDVVAWNVMISGHGK 304
Query: 633 TNKAKQAVAFFTELLGAGLEPDNVTVLSIISAGVLINSLNLTHSLMAFVIRKGLDKHVAV 692
A+ +F + + ++ T+ S++SA ++ +L+L + A I+ GL ++ V
Sbjct: 305 RGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYV 364
Query: 693 SNALMDSYVRCGNISMARKLFGSLIYKDAFSWSVMINGYGLYGDGEAALELFKQMQLSGV 752
++L+ Y +C + A K+F +L K+ W+ MI GY G+ +ELF M+ SG
Sbjct: 365 GSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGY 424
Query: 753 RPNEITYLGVLSACSHAGLVEQSKMVFKSMVEHGISQKMEHYACMVDLLGRTGHLNEAFI 812
++ T+ +LS C+ + +E +++ +++ + +VD+ + G L +A
Sbjct: 425 NIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQ 484
Query: 813 FVKKLPCKPSVS 824
+++ + +V+
Sbjct: 485 IFERMCDRDNVT 496
Score = 94.0 bits (232), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 62/282 (21%), Positives = 135/282 (47%), Gaps = 11/282 (3%)
Query: 567 IKQGMVIHGYAIKTGCVADVTFLNALITMYCNCGSTNDGRLCLLLFQMGDKREISLWNAI 626
++ G +H ++ G ++ NA++ +Y C + + ++++ WN++
Sbjct: 76 LRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFDFLE----KDVTAWNSM 131
Query: 627 ISVYVQTNKAKQAVAFFTELLGAGLEPDNVTVLSIISAGVLINSLNLTHSLMAFVIRKGL 686
+S+Y K + + F L + P+ T ++S ++ + +I+ GL
Sbjct: 132 LSMYSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGL 191
Query: 687 DKHVAVSNALMDSYVRCGNISMARKLFGSLIYKDAFSWSVMINGYGLYGDGEAALELFKQ 746
+++ AL+D Y +C IS AR++F ++ + W+ + +GY G E A+ +F++
Sbjct: 192 ERNSYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFER 251
Query: 747 MQLSGVRPNEITYLGVLSACSHAGLVEQSKMVFKSMVEHGISQKMEHYACMVDLLGRTGH 806
M+ G RP+ + ++ V++ G ++ ++++F M S + + M+ G+ G
Sbjct: 252 MRDEGHRPDHLAFVTVINTYIRLGKLKDARLLFGEMS----SPDVVAWNVMISGHGKRGC 307
Query: 807 LN---EAFIFVKKLPCKPSVSILESLLGACRIHGNVELGEII 845
E F ++K K + S L S+L A I N++LG ++
Sbjct: 308 ETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVV 349
>sp|O80647|PP195_ARATH Pentatricopeptide repeat-containing protein At2g39620
OS=Arabidopsis thaliana GN=PCMP-E33 PE=3 SV=1
Length = 836
Score = 405 bits (1042), Expect = e-112, Method: Compositional matrix adjust.
Identities = 246/796 (30%), Positives = 422/796 (53%), Gaps = 19/796 (2%)
Query: 104 FPIIKKPCVFLQNLMIRGLSNCGLHADLLHVY-IKCRLSGCPSDDFTFPFLIKACSSLSD 162
F ++ P V L N MIRG + GLH + L + G D ++F F +KAC+ D
Sbjct: 56 FDSVRDPGVVLWNSMIRGYTRAGLHREALGFFGYMSEEKGIDPDKYSFTFALKACAGSMD 115
Query: 163 LRIGREIHCVIFRTGYHQNLVIQTALVDFYAKKGEMLTARLLFDQIPLADLVSCNTLMAG 222
+ G IH +I G ++ I TALV+ Y K ++++AR +FD++ + D+V+ NT+++G
Sbjct: 116 FKKGLRIHDLIAEMGLESDVYIGTALVEMYCKARDLVSARQVFDKMHVKDVVTWNTMVSG 175
Query: 223 YSFNGLDQEALETFRRILTVGLKPNVSTFSSVIPVCTRLGHFCFGKSLHGFTIKSGYLFD 282
+ NG AL F + + + + + ++IP ++L + LHG IK G++F
Sbjct: 176 LAQNGCSSAALLLFHDMRSCCVDIDHVSLYNLIPAVSKLEKSDVCRCLHGLVIKKGFIFA 235
Query: 283 DFLVPALISMYAGDLDLSTARKLFDSLLEKNASVWNAMISAYTQSKKFFEAFEIFRQMIR 342
LI MY DL A +F+ + K+ S W M++AY + F E E+F M
Sbjct: 236 --FSSGLIDMYCNCADLYAAESVFEEVWRKDESSWGTMMAAYAHNGFFEEVLELFDLMRN 293
Query: 343 AEMQPDLVTFVSIIPSCENYCSFQCGESLTACVIKNGLGNQPSVLTALLSMYAKLGNIDS 402
+++ + V S + + G ++ ++ GL SV T+L+SMY+K G ++
Sbjct: 294 YDVRMNKVAAASALQAAAYVGDLVKGIAIHDYAVQQGLIGDVSVATSLMSMYSKCGELEI 353
Query: 403 AKFLFDQIPNRNLLCWNAMMSAYVRNRFWDASLAVFRQMQFAGLNPDAVSIISVLSGCSK 462
A+ LF I +R+++ W+AM+++Y + D ++++FR M + P+AV++ SVL GC+
Sbjct: 354 AEQLFINIEDRDVVSWSAMIASYEQAGQHDEAISLFRDMMRIHIKPNAVTLTSVLQGCAG 413
Query: 463 LDDVLLGKSAHAFSLRKGIVSNLDVLNALLMFYSDGGQFSYAFTLFHRMSTRSSVSWNTL 522
+ LGKS H ++++ I S L+ A++ Y+ G+FS A F R+ + +V++N L
Sbjct: 414 VAASRLGKSIHCYAIKADIESELETATAVISMYAKCGRFSPALKAFERLPIKDAVAFNAL 473
Query: 523 ISRCVQNGAVEEAVILLQRMQKEGVELDMVTLISFLPNLNKNGNIKQGMVIHGYAIKTGC 582
Q G +A + + M+ GV D T++ L + +G ++G IK G
Sbjct: 474 AQGYTQIGDANKAFDVYKNMKLHGVCPDSRTMVGMLQTCAFCSDYARGSCVYGQIIKHGF 533
Query: 583 VADVTFLNALITMYCNCGSTNDGRLCLLLFQMGDKREISLWNAIISVYVQTNKAKQAVAF 642
++ +ALI M+ C + +L + G ++ WN +++ Y+ +A++AVA
Sbjct: 534 DSECHVAHALINMFTKCDAL--AAAIVLFDKCGFEKSTVSWNIMMNGYLLHGQAEEAVAT 591
Query: 643 FTELLGAGLEPDNVTVLSIISAGVLINSLNLTHSLMAFVIRKGLDKHVAVSNALMDSYVR 702
F ++ +P+ VT ++I+ A +++L + S+ + +I+ G V N+L+D Y +
Sbjct: 592 FRQMKVEKFQPNAVTFVNIVRAAAELSALRVGMSVHSSLIQCGFCSQTPVGNSLVDMYAK 651
Query: 703 CGNISMARKLFGSLIYKDAFSWSVMINGYGLYGDGEAALELFKQMQLSGVRPNEITYLGV 762
CG I + K F + K SW+ M++ Y +G A+ LF MQ + ++P+ +++L V
Sbjct: 652 CGMIESSEKCFIEISNKYIVSWNTMLSAYAAHGLASCAVSLFLSMQENELKPDSVSFLSV 711
Query: 763 LSACSHAGLVEQSKMVFKSMVE-HGISQKMEHYACMVDLLGRTGHLNEAFIFVKKLPCKP 821
LSAC HAGLVE+ K +F+ M E H I ++EHYACMVDLLG+ G EA ++++ K
Sbjct: 712 LSACRHAGLVEEGKRIFEEMGERHKIEAEVEHYACMVDLLGKAGLFGEAVEMMRRMRVKT 771
Query: 822 SVSILESLLGACRIHGNVELGEIISGMLFEMDPENPGSYVMLHNIYASAGRWEDAYRVRS 881
SV + +LL + R+H N+ L L +++P NP Y S R R+
Sbjct: 772 SVGVWGALLNSSRMHCNLWLSNAALCQLVKLEPLNPSHY--------SQDR-----RLGE 818
Query: 882 CMKRSRLKKVPGFSLV 897
SR+KKVP S +
Sbjct: 819 VNNVSRIKKVPACSWI 834
Score = 239 bits (609), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 188/760 (24%), Positives = 352/760 (46%), Gaps = 55/760 (7%)
Query: 179 HQNLVI-----QTALVDFYAKKGEMLTARLLFDQIPLADLVSCNTLMAGYSFNGLDQEAL 233
H +L++ L++ Y+ +R++FD + +V N+++ GY+ GL +EAL
Sbjct: 25 HGSLIVSGLKPHNQLINAYSLFQRQDLSRVIFDSVRDPGVVLWNSMIRGYTRAGLHREAL 84
Query: 234 ETFRRI-LTVGLKPNVSTFSSVIPVCTRLGHFCFGKSLHGFTIKSGYLFDDFLVPALISM 292
F + G+ P+ +F+ + C F G +H + G D ++ AL+ M
Sbjct: 85 GFFGYMSEEKGIDPDKYSFTFALKACAGSMDFKKGLRIHDLIAEMGLESDVYIGTALVEM 144
Query: 293 YAGDLDLSTARKLFDSLLEKNASVWNAMISAYTQSKKFFEAFEIFRQMIRAEMQPDLVTF 352
Y DL +AR++FD + K+ WN M+S Q+ A +F M + D V+
Sbjct: 145 YCKARDLVSARQVFDKMHVKDVVTWNTMVSGLAQNGCSSAALLLFHDMRSCCVDIDHVSL 204
Query: 353 VSIIPSCENYCSFQCGESLTACVIKNGLGNQPSVLTALLSMYAKLGNIDSAKFLFDQIPN 412
++IP+ L VIK G S + L+ MY ++ +A+ +F+++
Sbjct: 205 YNLIPAVSKLEKSDVCRCLHGLVIKKGFIFAFS--SGLIDMYCNCADLYAAESVFEEVWR 262
Query: 413 RNLLCWNAMMSAYVRNRFWDASLAVFRQMQFAGLNPDAVSIISVLSGCSKLDDVLLGKSA 472
++ W MM+AY N F++ L +F M+ + + V+ S L + + D++ G +
Sbjct: 263 KDESSWGTMMAAYAHNGFFEEVLELFDLMRNYDVRMNKVAAASALQAAAYVGDLVKGIAI 322
Query: 473 HAFSLRKGIVSNLDVLNALLMFYSDGGQFSYAFTLFHRMSTRSSVSWNTLISRCVQNGAV 532
H +++++G++ ++ V +L+ YS G+ A LF + R VSW+ +I+ Q G
Sbjct: 323 HDYAVQQGLIGDVSVATSLMSMYSKCGELEIAEQLFINIEDRDVVSWSAMIASYEQAGQH 382
Query: 533 EEAVILLQRMQKEGVELDMVTLISFLPNLNKNGNIKQGMVIHGYAIKTGCVADVTFLNAL 592
+EA+ L + M + ++ + VTL S L + G IH YAIK +++ A+
Sbjct: 383 DEAISLFRDMMRIHIKPNAVTLTSVLQGCAGVAASRLGKSIHCYAIKADIESELETATAV 442
Query: 593 ITMYCNCGSTNDGRLCLLLFQMGDKREISLWNAIISVYVQTNKAKQAVAFFTELLGAGLE 652
I+MY CG + L F+ ++ +NA+ Y Q A +A + + G+
Sbjct: 443 ISMYAKCGRFSPA---LKAFERLPIKDAVAFNALAQGYTQIGDANKAFDVYKNMKLHGVC 499
Query: 653 PDNVTVLSIISAGVLINSLNLTHSLMAFVIRKGLDKHVAVSNALMDSYVRCGNISMARKL 712
PD+ T++ ++ + + +I+ G D V++AL++ + +C ++ A L
Sbjct: 500 PDSRTMVGMLQTCAFCSDYARGSCVYGQIIKHGFDSECHVAHALINMFTKCDALAAAIVL 559
Query: 713 FGSLIY-KDAFSWSVMINGYGLYGDGEAALELFKQMQLSGVRPNEITYLGVLSACSHAGL 771
F + K SW++M+NGY L+G E A+ F+QM++ +PN +T++ ++ A +
Sbjct: 560 FDKCGFEKSTVSWNIMMNGYLLHGQAEEAVATFRQMKVEKFQPNAVTFVNIVRAAAELSA 619
Query: 772 VEQSKMVFKSMVEHGISQKMEHYACMVDLLGRTGHLNEA--------------------- 810
+ V S+++ G + +VD+ + G + +
Sbjct: 620 LRVGMSVHSSLIQCGFCSQTPVGNSLVDMYAKCGMIESSEKCFIEISNKYIVSWNTMLSA 679
Query: 811 -------------FIFVKKLPCKP-SVSILESLLGACRIHGNVELGEII---SGMLFEMD 853
F+ +++ KP SVS L S+L ACR G VE G+ I G +++
Sbjct: 680 YAAHGLASCAVSLFLSMQENELKPDSVSFL-SVLSACRHAGLVEEGKRIFEEMGERHKIE 738
Query: 854 PENPGSYVMLHNIYASAGRWEDAYRVRSCMKRSRLKKVPG 893
E Y + ++ AG + +A + M+R R+K G
Sbjct: 739 AEVE-HYACMVDLLGKAGLFGEAVEM---MRRMRVKTSVG 774
Score = 229 bits (585), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 144/572 (25%), Positives = 279/572 (48%), Gaps = 10/572 (1%)
Query: 270 LHGFTIKSGYLFDDFLVPALISMYAGDLDLSTARKLFDSLLEKNASVWNAMISAYTQSKK 329
+HG I SG + L+ A DL +R +FDS+ + +WN+MI YT++
Sbjct: 24 VHGSLIVSGLKPHNQLINAYSLFQRQDL----SRVIFDSVRDPGVVLWNSMIRGYTRAGL 79
Query: 330 FFEAFEIFRQMIRAE-MQPDLVTFVSIIPSCENYCSFQCGESLTACVIKNGLGNQPSVLT 388
EA F M + + PD +F + +C F+ G + + + GL + + T
Sbjct: 80 HREALGFFGYMSEEKGIDPDKYSFTFALKACAGSMDFKKGLRIHDLIAEMGLESDVYIGT 139
Query: 389 ALLSMYAKLGNIDSAKFLFDQIPNRNLLCWNAMMSAYVRNRFWDASLAVFRQMQFAGLNP 448
AL+ MY K ++ SA+ +FD++ ++++ WN M+S +N A+L +F M+ ++
Sbjct: 140 ALVEMYCKARDLVSARQVFDKMHVKDVVTWNTMVSGLAQNGCSSAALLLFHDMRSCCVDI 199
Query: 449 DAVSIISVLSGCSKLDDVLLGKSAHAFSLRKGIVSNLDVLNALLMFYSDGGQFSYAFTLF 508
D VS+ +++ SKL+ + + H ++KG + + L+ Y + A ++F
Sbjct: 200 DHVSLYNLIPAVSKLEKSDVCRCLHGLVIKKGFIFAFS--SGLIDMYCNCADLYAAESVF 257
Query: 509 HRMSTRSSVSWNTLISRCVQNGAVEEAVILLQRMQKEGVELDMVTLISFLPNLNKNGNIK 568
+ + SW T+++ NG EE + L M+ V ++ V S L G++
Sbjct: 258 EEVWRKDESSWGTMMAAYAHNGFFEEVLELFDLMRNYDVRMNKVAAASALQAAAYVGDLV 317
Query: 569 QGMVIHGYAIKTGCVADVTFLNALITMYCNCGSTNDGRLCLLLFQMGDKREISLWNAIIS 628
+G+ IH YA++ G + DV+ +L++MY CG + LF + R++ W+A+I+
Sbjct: 318 KGIAIHDYAVQQGLIGDVSVATSLMSMYSKCGEL---EIAEQLFINIEDRDVVSWSAMIA 374
Query: 629 VYVQTNKAKQAVAFFTELLGAGLEPDNVTVLSIISAGVLINSLNLTHSLMAFVIRKGLDK 688
Y Q + +A++ F +++ ++P+ VT+ S++ + + L S+ + I+ ++
Sbjct: 375 SYEQAGQHDEAISLFRDMMRIHIKPNAVTLTSVLQGCAGVAASRLGKSIHCYAIKADIES 434
Query: 689 HVAVSNALMDSYVRCGNISMARKLFGSLIYKDAFSWSVMINGYGLYGDGEAALELFKQMQ 748
+ + A++ Y +CG S A K F L KDA +++ + GY GD A +++K M+
Sbjct: 435 ELETATAVISMYAKCGRFSPALKAFERLPIKDAVAFNALAQGYTQIGDANKAFDVYKNMK 494
Query: 749 LSGVRPNEITYLGVLSACSHAGLVEQSKMVFKSMVEHGISQKMEHYACMVDLLGRTGHLN 808
L GV P+ T +G+L C+ + V+ +++HG + ++++ + L
Sbjct: 495 LHGVCPDSRTMVGMLQTCAFCSDYARGSCVYGQIIKHGFDSECHVAHALINMFTKCDALA 554
Query: 809 EAFIFVKKLPCKPSVSILESLLGACRIHGNVE 840
A + K + S ++ +HG E
Sbjct: 555 AAIVLFDKCGFEKSTVSWNIMMNGYLLHGQAE 586
>sp|Q9C507|PP111_ARATH Putative pentatricopeptide repeat-containing protein At1g69350,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E66 PE=3
SV=1
Length = 787
Score = 399 bits (1025), Expect = e-110, Method: Compositional matrix adjust.
Identities = 238/748 (31%), Positives = 408/748 (54%), Gaps = 11/748 (1%)
Query: 153 LIKACSSLSDLRIGREIHCVIFRTG-YHQNLVIQTALVDFYAKKGEMLTARLLFDQIPLA 211
L ++CSSL R+ ++H + TG ++ + T L++ YA G ++RL+F+ P
Sbjct: 7 LFRSCSSL---RLVSQLHAHLLVTGRLRRDPLPVTKLIESYAFMGSPDSSRLVFEAFPYP 63
Query: 212 DLVSCNTLMAGYSFNGLDQEALETFRRILTVGLKPNVSTFSSVIPVCT-RLGHFCFGKSL 270
D L+ + L A++ + R+++ + + F SV+ C H G +
Sbjct: 64 DSFMYGVLIKCNVWCHLLDAAIDLYHRLVSETTQISKFVFPSVLRACAGSREHLSVGGKV 123
Query: 271 HGFTIKSGYLFDDFLVPALISMYAGDLDLSTARKLFDSLLEKNASVWNAMISAYTQSKKF 330
HG IK G D + +L+ MY +LS A K+FD + ++ W+ ++S+ ++ +
Sbjct: 124 HGRIIKGGVDDDAVIETSLLCMYGQTGNLSDAEKVFDGMPVRDLVAWSTLVSSCLENGEV 183
Query: 331 FEAFEIFRQMIRAEMQPDLVTFVSIIPSCENYCSFQCGESLTACVIKNGLGNQPSVLTAL 390
+A +F+ M+ ++PD VT +S++ C + S+ + + ++ +L
Sbjct: 184 VKALRMFKCMVDDGVEPDAVTMISVVEGCAELGCLRIARSVHGQITRKMFDLDETLCNSL 243
Query: 391 LSMYAKLGNIDSAKFLFDQIPNRNLLCWNAMMSAYVRNRFWDASLAVFRQMQFAGLNPDA 450
L+MY+K G++ S++ +F++I +N + W AM+S+Y R F + +L F +M +G+ P+
Sbjct: 244 LTMYSKCGDLLSSERIFEKIAKKNAVSWTAMISSYNRGEFSEKALRSFSEMIKSGIEPNL 303
Query: 451 VSIISVLSGCSKLDDVLLGKSAHAFSLRKGIVSNLDVLN-ALLMFYSDGGQFSYAFTLFH 509
V++ SVLS C + + GKS H F++R+ + N + L+ AL+ Y++ G+ S T+
Sbjct: 304 VTLYSVLSSCGLIGLIREGKSVHGFAVRRELDPNYESLSLALVELYAECGKLSDCETVLR 363
Query: 510 RMSTRSSVSWNTLISRCVQNGAVEEAVILLQRMQKEGVELDMVTLISFLPNLNKNGNIKQ 569
+S R+ V+WN+LIS G V +A+ L ++M + ++ D TL S + G +
Sbjct: 364 VVSDRNIVAWNSLISLYAHRGMVIQALGLFRQMVTQRIKPDAFTLASSISACENAGLVPL 423
Query: 570 GMVIHGYAIKTGCVADVTFLNALITMYCNCGSTNDGRLCLLLFQMGDKREISLWNAIISV 629
G IHG+ I+T V+D N+LI MY GS + +F R + WN+++
Sbjct: 424 GKQIHGHVIRTD-VSDEFVQNSLIDMYSKSGSVDSAST---VFNQIKHRSVVTWNSMLCG 479
Query: 630 YVQTNKAKQAVAFFTELLGAGLEPDNVTVLSIISAGVLINSLNLTHSLMAFVIRKGLDKH 689
+ Q + +A++ F + + LE + VT L++I A I SL + +I GL K
Sbjct: 480 FSQNGNSVEAISLFDYMYHSYLEMNEVTFLAVIQACSSIGSLEKGKWVHHKLIISGL-KD 538
Query: 690 VAVSNALMDSYVRCGNISMARKLFGSLIYKDAFSWSVMINGYGLYGDGEAALELFKQMQL 749
+ AL+D Y +CG+++ A +F ++ + SWS MIN YG++G +A+ F QM
Sbjct: 539 LFTDTALIDMYAKCGDLNAAETVFRAMSSRSIVSWSSMINAYGMHGRIGSAISTFNQMVE 598
Query: 750 SGVRPNEITYLGVLSACSHAGLVEQSKMVFKSMVEHGISQKMEHYACMVDLLGRTGHLNE 809
SG +PNE+ ++ VLSAC H+G VE+ K F M G+S EH+AC +DLL R+G L E
Sbjct: 599 SGTKPNEVVFMNVLSACGHSGSVEEGKYYFNLMKSFGVSPNSEHFACFIDLLSRSGDLKE 658
Query: 810 AFIFVKKLPCKPSVSILESLLGACRIHGNVELGEIISGMLFEMDPENPGSYVMLHNIYAS 869
A+ +K++P S+ SL+ CRIH +++ + I L ++ ++ G Y +L NIYA
Sbjct: 659 AYRTIKEMPFLADASVWGSLVNGCRIHQKMDIIKAIKNDLSDIVTDDTGYYTLLSNIYAE 718
Query: 870 AGRWEDAYRVRSCMKRSRLKKVPGFSLV 897
G WE+ R+RS MK S LKKVPG+S +
Sbjct: 719 EGEWEEFRRLRSAMKSSNLKKVPGYSAI 746
Score = 265 bits (678), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 189/696 (27%), Positives = 351/696 (50%), Gaps = 19/696 (2%)
Query: 76 LKALPLPALALRTLEAF--EITSYHIALSSFPIIKKPCVFLQNLMIRGLSNCGLHADLLH 133
L+ PLP L AF S + +FP P F+ ++I+ C L +
Sbjct: 30 LRRDPLPVTKLIESYAFMGSPDSSRLVFEAFPY---PDSFMYGVLIKCNVWCHLLDAAID 86
Query: 134 VYIKCRLSGCPSDDFTFPFLIKACS-SLSDLRIGREIHCVIFRTGYHQNLVIQTALVDFY 192
+Y + F FP +++AC+ S L +G ++H I + G + VI+T+L+ Y
Sbjct: 87 LYHRLVSETTQISKFVFPSVLRACAGSREHLSVGGKVHGRIIKGGVDDDAVIETSLLCMY 146
Query: 193 AKKGEMLTARLLFDQIPLADLVSCNTLMAGYSFNGLDQEALETFRRILTVGLKPNVSTFS 252
+ G + A +FD +P+ DLV+ +TL++ NG +AL F+ ++ G++P+ T
Sbjct: 147 GQTGNLSDAEKVFDGMPVRDLVAWSTLVSSCLENGEVVKALRMFKCMVDDGVEPDAVTMI 206
Query: 253 SVIPVCTRLGHFCFGKSLHGFTIKSGYLFDDFLVPALISMYAGDLDLSTARKLFDSLLEK 312
SV+ C LG +S+HG + + D+ L +L++MY+ DL ++ ++F+ + +K
Sbjct: 207 SVVEGCAELGCLRIARSVHGQITRKMFDLDETLCNSLLTMYSKCGDLLSSERIFEKIAKK 266
Query: 313 NASVWNAMISAYTQSKKFFEAFEIFRQMIRAEMQPDLVTFVSIIPSCENYCSFQCGESLT 372
NA W AMIS+Y + + +A F +MI++ ++P+LVT S++ SC + G+S+
Sbjct: 267 NAVSWTAMISSYNRGEFSEKALRSFSEMIKSGIEPNLVTLYSVLSSCGLIGLIREGKSVH 326
Query: 373 ACVIKNGLG-NQPSVLTALLSMYAKLGNIDSAKFLFDQIPNRNLLCWNAMMSAYVRNRFW 431
++ L N S+ AL+ +YA+ G + + + + +RN++ WN+++S Y
Sbjct: 327 GFAVRRELDPNYESLSLALVELYAECGKLSDCETVLRVVSDRNIVAWNSLISLYAHRGMV 386
Query: 432 DASLAVFRQMQFAGLNPDAVSIISVLSGCSKLDDVLLGKSAHAFSLRKGIVSNLDVLNAL 491
+L +FRQM + PDA ++ S +S C V LGK H +R VS+ V N+L
Sbjct: 387 IQALGLFRQMVTQRIKPDAFTLASSISACENAGLVPLGKQIHGHVIRTD-VSDEFVQNSL 445
Query: 492 LMFYSDGGQFSYAFTLFHRMSTRSSVSWNTLISRCVQNGAVEEAVILLQRMQKEGVELDM 551
+ YS G A T+F+++ RS V+WN+++ QNG EA+ L M +E++
Sbjct: 446 IDMYSKSGSVDSASTVFNQIKHRSVVTWNSMLCGFSQNGNSVEAISLFDYMYHSYLEMNE 505
Query: 552 VTLISFLPNLNKNGNIKQGMVIHGYAIKTGCVADVTFLNALITMYCNCGSTNDGRLCLLL 611
VT ++ + + G++++G +H I +G + D+ ALI MY CG N +
Sbjct: 506 VTFLAVIQACSSIGSLEKGKWVHHKLIISG-LKDLFTDTALIDMYAKCGDLNAAE---TV 561
Query: 612 FQMGDKREISLWNAIISVYVQTNKAKQAVAFFTELLGAGLEPDNVTVLSIISAGVLINSL 671
F+ R I W+++I+ Y + A++ F +++ +G +P+ V ++++SA S+
Sbjct: 562 FRAMSSRSIVSWSSMINAYGMHGRIGSAISTFNQMVESGTKPNEVVFMNVLSACGHSGSV 621
Query: 672 NLTHSLMAFVIRKGLDKHVAVSNALMDSYVRCGNISMARKLFGSLIY-KDAFSWSVMING 730
+ G+ + +D R G++ A + + + DA W ++NG
Sbjct: 622 EEGKYYFNLMKSFGVSPNSEHFACFIDLLSRSGDLKEAYRTIKEMPFLADASVWGSLVNG 681
Query: 731 YGLYGDGEAALELFKQMQ--LSGVRPNEITYLGVLS 764
++ +++ K ++ LS + ++ Y +LS
Sbjct: 682 CRIH----QKMDIIKAIKNDLSDIVTDDTGYYTLLS 713
>sp|Q9SVA5|PP357_ARATH Pentatricopeptide repeat-containing protein At4g39530
OS=Arabidopsis thaliana GN=PCMP-E52 PE=1 SV=1
Length = 834
Score = 397 bits (1020), Expect = e-109, Method: Compositional matrix adjust.
Identities = 234/740 (31%), Positives = 398/740 (53%), Gaps = 17/740 (2%)
Query: 169 IHCVIFRTGYHQNLVIQTALVDFYAKKGEMLTARLLFDQIPLADLVSCNTLMAGYSFNGL 228
+H I G + + L++ Y++ G M+ AR +F+++P +LVS +T+++ + +G+
Sbjct: 66 VHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKMPERNLVSWSTMVSACNHHGI 125
Query: 229 DQEALETFRRIL-TVGLKPNVSTFSSVIPVCTRL---GHFCFGKSLHGFTIKSGYLFDDF 284
+E+L F T PN SS I C+ L G + + L F +KSG+ D +
Sbjct: 126 YEESLVVFLEFWRTRKDSPNEYILSSFIQACSGLDGRGRWMVFQ-LQSFLVKSGFDRDVY 184
Query: 285 LVPALISMYAGDLDLSTARKLFDSLLEKNASVWNAMISAYTQSKKFFEAFEIFRQMIRAE 344
+ LI Y D ++ AR +FD+L EK+ W MIS + + + + ++F Q++
Sbjct: 185 VGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEDN 244
Query: 345 MQPDLVTFVSIIPSCENYCSFQCGESLTACVIKNGLGNQPSVLTALLSMYAKLGNIDSAK 404
+ PD +++ +C + G+ + A +++ GL S++ L+ Y K G + +A
Sbjct: 245 VVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGRVIAAH 304
Query: 405 FLFDQIPNRNLLCWNAMMSAYVRNRFWDASLAVFRQMQFAGLNPDAVSIISVLSGCSKLD 464
LF+ +PN+N++ W ++S Y +N ++ +F M GL PD + S+L+ C+ L
Sbjct: 305 KLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSILTSCASLH 364
Query: 465 DVLLGKSAHAFSLRKGIVSNLDVLNALLMFYSDGGQFSYAFTLFHRMSTRSSVSWNTLI- 523
+ G HA++++ + ++ V N+L+ Y+ + A +F + V +N +I
Sbjct: 365 ALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFAAADVVLFNAMIE 424
Query: 524 --SRCVQNGAVEEAVILLQRMQKEGVELDMVTLISFL---PNLNKNGNIKQGMVIHGYAI 578
SR + EA+ + + M+ + ++T +S L +L G KQ IHG
Sbjct: 425 GYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQ---IHGLMF 481
Query: 579 KTGCVADVTFLNALITMYCNCGSTNDGRLCLLLFQMGDKREISLWNAIISVYVQTNKAKQ 638
K G D+ +ALI +Y NC D RL +F +++ +WN++ + YVQ ++ ++
Sbjct: 482 KYGLNLDIFAGSALIDVYSNCYCLKDSRL---VFDEMKVKDLVIWNSMFAGYVQQSENEE 538
Query: 639 AVAFFTELLGAGLEPDNVTVLSIISAGVLINSLNLTHSLMAFVIRKGLDKHVAVSNALMD 698
A+ F EL + PD T ++++A + S+ L ++++GL+ + ++NAL+D
Sbjct: 539 ALNLFLELQLSRERPDEFTFANMVTAAGNLASVQLGQEFHCQLLKRGLECNPYITNALLD 598
Query: 699 SYVRCGNISMARKLFGSLIYKDAFSWSVMINGYGLYGDGEAALELFKQMQLSGVRPNEIT 758
Y +CG+ A K F S +D W+ +I+ Y +G+G+ AL++ ++M G+ PN IT
Sbjct: 599 MYAKCGSPEDAHKAFDSAASRDVVCWNSVISSYANHGEGKKALQMLEKMMSEGIEPNYIT 658
Query: 759 YLGVLSACSHAGLVEQSKMVFKSMVEHGISQKMEHYACMVDLLGRTGHLNEAFIFVKKLP 818
++GVLSACSHAGLVE F+ M+ GI + EHY CMV LLGR G LN+A ++K+P
Sbjct: 659 FVGVLSACSHAGLVEDGLKQFELMLRFGIEPETEHYVCMVSLLGRAGRLNKARELIEKMP 718
Query: 819 CKPSVSILESLLGACRIHGNVELGEIISGMLFEMDPENPGSYVMLHNIYASAGRWEDAYR 878
KP+ + SLL C GNVEL E + M DP++ GS+ ML NIYAS G W +A +
Sbjct: 719 TKPAAIVWRSLLSGCAKAGNVELAEHAAEMAILSDPKDSGSFTMLSNIYASKGMWTEAKK 778
Query: 879 VRSCMKRSRLKKVPGFSLVG 898
VR MK + K PG S +G
Sbjct: 779 VRERMKVEGVVKEPGRSWIG 798
Score = 232 bits (591), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 143/528 (27%), Positives = 261/528 (49%), Gaps = 5/528 (0%)
Query: 104 FPIIKKPCVFLQNLMIRGLSNCGLHADLLHVYIKCRLSGCPSDDFTFPFLIKACSSLSDL 163
F + + MI G G L ++ + D + ++ ACS L L
Sbjct: 206 FDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEDNVVPDGYILSTVLSACSILPFL 265
Query: 164 RIGREIHCVIFRTGYHQNLVIQTALVDFYAKKGEMLTARLLFDQIPLADLVSCNTLMAGY 223
G++IH I R G + + L+D Y K G ++ A LF+ +P +++S TL++GY
Sbjct: 266 EGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGY 325
Query: 224 SFNGLDQEALETFRRILTVGLKPNVSTFSSVIPVCTRLGHFCFGKSLHGFTIKSGYLFDD 283
N L +EA+E F + GLKP++ SS++ C L FG +H +TIK+ D
Sbjct: 326 KQNALHKEAMELFTSMSKFGLKPDMYACSSILTSCASLHALGFGTQVHAYTIKANLGNDS 385
Query: 284 FLVPALISMYAGDLDLSTARKLFDSLLEKNASVWNAMISAYTQ---SKKFFEAFEIFRQM 340
++ +LI MYA L+ ARK+FD + ++NAMI Y++ + EA IFR M
Sbjct: 386 YVTNSLIDMYAKCDCLTDARKVFDIFAAADVVLFNAMIEGYSRLGTQWELHEALNIFRDM 445
Query: 341 IRAEMQPDLVTFVSIIPSCENYCSFQCGESLTACVIKNGLGNQPSVLTALLSMYAKLGNI 400
++P L+TFVS++ + + S + + + K GL +AL+ +Y+ +
Sbjct: 446 RFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFKYGLNLDIFAGSALIDVYSNCYCL 505
Query: 401 DSAKFLFDQIPNRNLLCWNAMMSAYVRNRFWDASLAVFRQMQFAGLNPDAVSIISVLSGC 460
++ +FD++ ++L+ WN+M + YV+ + +L +F ++Q + PD + ++++
Sbjct: 506 KDSRLVFDEMKVKDLVIWNSMFAGYVQQSENEEALNLFLELQLSRERPDEFTFANMVTAA 565
Query: 461 SKLDDVLLGKSAHAFSLRKGIVSNLDVLNALLMFYSDGGQFSYAFTLFHRMSTRSSVSWN 520
L V LG+ H L++G+ N + NALL Y+ G A F ++R V WN
Sbjct: 566 GNLASVQLGQEFHCQLLKRGLECNPYITNALLDMYAKCGSPEDAHKAFDSAASRDVVCWN 625
Query: 521 TLISRCVQNGAVEEAVILLQRMQKEGVELDMVTLISFLPNLNKNGNIKQGMVIHGYAIKT 580
++IS +G ++A+ +L++M EG+E + +T + L + G ++ G+ ++
Sbjct: 626 SVISSYANHGEGKKALQMLEKMMSEGIEPNYITFVGVLSACSHAGLVEDGLKQFELMLRF 685
Query: 581 GCVADVTFLNALITMYCNCGSTNDGRLCLLLFQMGDKREISLWNAIIS 628
G + ++++ G N R L+ +M K +W +++S
Sbjct: 686 GIEPETEHYVCMVSLLGRAGRLNKAR--ELIEKMPTKPAAIVWRSLLS 731
>sp|Q3E6Q1|PPR32_ARATH Pentatricopeptide repeat-containing protein At1g11290
OS=Arabidopsis thaliana GN=PCMP-H40 PE=2 SV=1
Length = 809
Score = 397 bits (1020), Expect = e-109, Method: Compositional matrix adjust.
Identities = 211/626 (33%), Positives = 361/626 (57%), Gaps = 10/626 (1%)
Query: 276 KSGYLFDDFLVPALISMYAGDLDLSTARKLFDSLLEKNASVWNAMISAYTQSKKFFEAFE 335
K+G + F L+S++ + A ++F+ + K +++ M+ + + +A +
Sbjct: 62 KNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSKLNVLYHTMLKGFAKVSDLDKALQ 121
Query: 336 IFRQMIRAEMQPDLVTFVSIIPSCENYCSFQCGESLTACVIKNGLGNQPSVLTALLSMYA 395
F +M +++P + F ++ C + + G+ + ++K+G +T L +MYA
Sbjct: 122 FFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYA 181
Query: 396 KLGNIDSAKFLFDQIPNRNLLCWNAMMSAYVRNRFWDASLAVFRQMQFAGLNPDAVSIIS 455
K ++ A+ +FD++P R+L+ WN +++ Y +N +L + + M L P ++I+S
Sbjct: 182 KCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVS 241
Query: 456 VLSGCSKLDDVLLGKSAHAFSLRKGIVSNLDVLNALLMFYSDGGQFSYAFTLFHRMSTRS 515
VL S L + +GK H +++R G S +++ AL+ Y+ G A LF M R+
Sbjct: 242 VLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERN 301
Query: 516 SVSWNTLISRCVQNGAVEEAVILLQRMQKEGVELDMVTLISFLPNLNKNGNIKQGMVIHG 575
VSWN++I VQN +EA+++ Q+M EGV+ V+++ L G++++G IH
Sbjct: 302 VVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHK 361
Query: 576 YAIKTGCVADVTFLNALITMYCNCGSTNDGRLCLLLFQMGDKREISLWNAIISVYVQTNK 635
+++ G +V+ +N+LI+MYC C + +F R + WNA+I + Q +
Sbjct: 362 LSVELGLDRNVSVVNSLISMYCKCKEVDTA---ASMFGKLQSRTLVSWNAMILGFAQNGR 418
Query: 636 AKQAVAFFTELLGAGLEPDNVTVLSIISAGVLINSLNLTHS---LMAFVIRKGLDKHVAV 692
A+ +F+++ ++PD T +S+I+A I L++TH + V+R LDK+V V
Sbjct: 419 PIDALNYFSQMRSRTVKPDTFTYVSVITA---IAELSITHHAKWIHGVVMRSCLDKNVFV 475
Query: 693 SNALMDSYVRCGNISMARKLFGSLIYKDAFSWSVMINGYGLYGDGEAALELFKQMQLSGV 752
+ AL+D Y +CG I +AR +F + + +W+ MI+GYG +G G+AALELF++MQ +
Sbjct: 476 TTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTI 535
Query: 753 RPNEITYLGVLSACSHAGLVEQSKMVFKSMVE-HGISQKMEHYACMVDLLGRTGHLNEAF 811
+PN +T+L V+SACSH+GLVE F M E + I M+HY MVDLLGR G LNEA+
Sbjct: 536 KPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAW 595
Query: 812 IFVKKLPCKPSVSILESLLGACRIHGNVELGEIISGMLFEMDPENPGSYVMLHNIYASAG 871
F+ ++P KP+V++ ++LGAC+IH NV E + LFE++P++ G +V+L NIY +A
Sbjct: 596 DFIMQMPVKPAVNVYGAMLGACQIHKNVNFAEKAAERLFELNPDDGGYHVLLANIYRAAS 655
Query: 872 RWEDAYRVRSCMKRSRLKKVPGFSLV 897
WE +VR M R L+K PG S+V
Sbjct: 656 MWEKVGQVRVSMLRQGLRKTPGCSMV 681
Score = 274 bits (701), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 155/523 (29%), Positives = 279/523 (53%), Gaps = 8/523 (1%)
Query: 144 PSDDFTFP--FLIKACSSLSDLRIGREIHCVIFRTGYHQNLVIQTALVDFYAKKGEMLTA 201
P++ + P L++ CSSL +LR +I ++F+ G +Q QT LV + + G + A
Sbjct: 32 PANVYEHPAALLLERCSSLKELR---QILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEA 88
Query: 202 RLLFDQIPLADLVSCNTLMAGYSFNGLDQEALETFRRILTVGLKPNVSTFSSVIPVCTRL 261
+F+ I V +T++ G++ +AL+ F R+ ++P V F+ ++ VC
Sbjct: 89 ARVFEPIDSKLNVLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDE 148
Query: 262 GHFCFGKSLHGFTIKSGYLFDDFLVPALISMYAGDLDLSTARKLFDSLLEKNASVWNAMI 321
GK +HG +KSG+ D F + L +MYA ++ ARK+FD + E++ WN ++
Sbjct: 149 AELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIV 208
Query: 322 SAYTQSKKFFEAFEIFRQMIRAEMQPDLVTFVSIIPSCENYCSFQCGESLTACVIKNGLG 381
+ Y+Q+ A E+ + M ++P +T VS++P+ G+ + +++G
Sbjct: 209 AGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFD 268
Query: 382 NQPSVLTALLSMYAKLGNIDSAKFLFDQIPNRNLLCWNAMMSAYVRNRFWDASLAVFRQM 441
+ ++ TAL+ MYAK G++++A+ LFD + RN++ WN+M+ AYV+N ++ +F++M
Sbjct: 269 SLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKM 328
Query: 442 QFAGLNPDAVSIISVLSGCSKLDDVLLGKSAHAFSLRKGIVSNLDVLNALLMFYSDGGQF 501
G+ P VS++ L C+ L D+ G+ H S+ G+ N+ V+N+L+ Y +
Sbjct: 329 LDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEV 388
Query: 502 SYAFTLFHRMSTRSSVSWNTLISRCVQNGAVEEAVILLQRMQKEGVELDMVTLISFLPNL 561
A ++F ++ +R+ VSWN +I QNG +A+ +M+ V+ D T +S + +
Sbjct: 389 DTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAI 448
Query: 562 NKNGNIKQGMVIHGYAIKTGCVADVTFLNALITMYCNCGSTNDGRLCLLLFQMGDKREIS 621
+ IHG +++ +V AL+ MY CG+ R L+F M +R ++
Sbjct: 449 AELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIAR---LIFDMMSERHVT 505
Query: 622 LWNAIISVYVQTNKAKQAVAFFTELLGAGLEPDNVTVLSIISA 664
WNA+I Y K A+ F E+ ++P+ VT LS+ISA
Sbjct: 506 TWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISA 548
Score = 257 bits (657), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 167/562 (29%), Positives = 291/562 (51%), Gaps = 26/562 (4%)
Query: 105 PIIKKPCVFLQNLMIRGLSNCGLHADLLHVYIKCRLSGCPSDDFTFPFLIKACSSLSDLR 164
PI K V L + M++G + L +++ R + F +L+K C ++LR
Sbjct: 94 PIDSKLNV-LYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELR 152
Query: 165 IGREIHCVIFRTGYHQNLVIQTALVDFYAKKGEMLTARLLFDQIPLADLVSCNTLMAGYS 224
+G+EIH ++ ++G+ +L T L + YAK ++ AR +FD++P DLVS NT++AGYS
Sbjct: 153 VGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYS 212
Query: 225 FNGLDQEALETFRRILTVGLKPNVSTFSSVIPVCTRLGHFCFGKSLHGFTIKSGYLFDDF 284
NG+ + ALE + + LKP+ T SV+P + L GK +HG+ ++SG+ D
Sbjct: 213 QNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGF---DS 269
Query: 285 LV---PALISMYAGDLDLSTARKLFDSLLEKNASVWNAMISAYTQSKKFFEAFEIFRQMI 341
LV AL+ MYA L TAR+LFD +LE+N WN+MI AY Q++ EA IF++M+
Sbjct: 270 LVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKML 329
Query: 342 RAEMQPDLVTFVSIIPSCENYCSFQCGESLTACVIKNGLGNQPSVLTALLSMYAKLGNID 401
++P V+ + + +C + + G + ++ GL SV+ +L+SMY K +D
Sbjct: 330 DEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVD 389
Query: 402 SAKFLFDQIPNRNLLCWNAMMSAYVRNRFWDASLAVFRQMQFAGLNPDAVSIISVLSGCS 461
+A +F ++ +R L+ WNAM+ + +N +L F QM+ + PD + +SV++ +
Sbjct: 390 TAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIA 449
Query: 462 KLDDVLLGKSAHAFSLRKGIVSNLDVLNALLMFYSDGGQFSYAFTLFHRMSTRSSVSWNT 521
+L K H +R + N+ V AL+ Y+ G A +F MS R +WN
Sbjct: 450 ELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNA 509
Query: 522 LISRCVQNGAVEEAVILLQRMQKEGVELDMVTLISFLPNLNKNGNIKQG-----MVIHGY 576
+I +G + A+ L + MQK ++ + VT +S + + +G ++ G M+ Y
Sbjct: 510 MIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENY 569
Query: 577 AIKTGCVADVTFLNALITMYCNCGSTNDGRLCLLLFQMGDKREISLWNAII---SVYVQT 633
+I+ + A++ + G N+ + QM K ++++ A++ ++
Sbjct: 570 SIELS----MDHYGAMVDLLGRAGRLNEA--WDFIMQMPVKPAVNVYGAMLGACQIHKNV 623
Query: 634 NKAKQAVAFFTELLGAGLEPDN 655
N A++A E L PD+
Sbjct: 624 NFAEKAAERLFE-----LNPDD 640
Score = 187 bits (475), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 124/437 (28%), Positives = 214/437 (48%), Gaps = 7/437 (1%)
Query: 153 LIKACSSLSDLRIGREIHCVIFRTGYHQNLVIQTALVDFYAKKGEMLTARLLFDQIPLAD 212
++ A S+L + +G+EIH R+G+ + I TALVD YAK G + TAR LFD + +
Sbjct: 242 VLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERN 301
Query: 213 LVSCNTLMAGYSFNGLDQEALETFRRILTVGLKPNVSTFSSVIPVCTRLGHFCFGKSLHG 272
+VS N+++ Y N +EA+ F+++L G+KP + + C LG G+ +H
Sbjct: 302 VVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHK 361
Query: 273 FTIKSGYLFDDFLVPALISMYAGDLDLSTARKLFDSLLEKNASVWNAMISAYTQSKKFFE 332
+++ G + +V +LISMY ++ TA +F L + WNAMI + Q+ + +
Sbjct: 362 LSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPID 421
Query: 333 AFEIFRQMIRAEMQPDLVTFVSIIPSCENYCSFQCGESLTACVIKNGLGNQPSVLTALLS 392
A F QM ++PD T+VS+I + + + V+++ L V TAL+
Sbjct: 422 ALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVD 481
Query: 393 MYAKLGNIDSAKFLFDQIPNRNLLCWNAMMSAYVRNRFWDASLAVFRQMQFAGLNPDAVS 452
MYAK G I A+ +FD + R++ WNAM+ Y + F A+L +F +MQ + P+ V+
Sbjct: 482 MYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVT 541
Query: 453 IISVLSGCSKLDDVLLG-KSAHAFSLRKGIVSNLDVLNALLMFYSDGGQFSYAFTLFHRM 511
+SV+S CS V G K + I ++D A++ G+ + A+ +M
Sbjct: 542 FLSVISACSHSGLVEAGLKCFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQM 601
Query: 512 STRSSVS-WNTLISRCVQNGAVEEAVILLQRM-----QKEGVELDMVTLISFLPNLNKNG 565
+ +V+ + ++ C + V A +R+ G + + + K G
Sbjct: 602 PVKPAVNVYGAMLGACQIHKNVNFAEKAAERLFELNPDDGGYHVLLANIYRAASMWEKVG 661
Query: 566 NIKQGMVIHGYAIKTGC 582
++ M+ G GC
Sbjct: 662 QVRVSMLRQGLRKTPGC 678
Score = 93.6 bits (231), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 84/163 (51%)
Query: 100 ALSSFPIIKKPCVFLQNLMIRGLSNCGLHADLLHVYIKCRLSGCPSDDFTFPFLIKACSS 159
A S F ++ + N MI G + G D L+ + + R D FT+ +I A +
Sbjct: 391 AASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAE 450
Query: 160 LSDLRIGREIHCVIFRTGYHQNLVIQTALVDFYAKKGEMLTARLLFDQIPLADLVSCNTL 219
LS + IH V+ R+ +N+ + TALVD YAK G ++ ARL+FD + + + N +
Sbjct: 451 LSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAM 510
Query: 220 MAGYSFNGLDQEALETFRRILTVGLKPNVSTFSSVIPVCTRLG 262
+ GY +G + ALE F + +KPN TF SVI C+ G
Sbjct: 511 IDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHSG 553
Score = 45.1 bits (105), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/156 (20%), Positives = 66/156 (42%)
Query: 669 NSLNLTHSLMAFVIRKGLDKHVAVSNALMDSYVRCGNISMARKLFGSLIYKDAFSWSVMI 728
+SL ++ V + GL + L+ + R G++ A ++F + K + M+
Sbjct: 48 SSLKELRQILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSKLNVLYHTML 107
Query: 729 NGYGLYGDGEAALELFKQMQLSGVRPNEITYLGVLSACSHAGLVEQSKMVFKSMVEHGIS 788
G+ D + AL+ F +M+ V P + +L C + K + +V+ G S
Sbjct: 108 KGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFS 167
Query: 789 QKMEHYACMVDLLGRTGHLNEAFIFVKKLPCKPSVS 824
+ + ++ + +NEA ++P + VS
Sbjct: 168 LDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVS 203
>sp|Q9FNN9|PP370_ARATH Putative pentatricopeptide repeat-containing protein At5g08490
OS=Arabidopsis thaliana GN=PCMP-E32 PE=3 SV=1
Length = 849
Score = 394 bits (1013), Expect = e-108, Method: Compositional matrix adjust.
Identities = 231/803 (28%), Positives = 428/803 (53%), Gaps = 55/803 (6%)
Query: 140 LSGCPSDDFTFPFLIKACSSLSDLRIGREIHCVIFRTGYHQNLVIQTALVDFYAKKGEML 199
LSG +D F ++KAC+S+SDL GR +H +F+ G+ + ++++ YAK M
Sbjct: 14 LSGFGTDHRVFLDVVKACASVSDLTSGRALHGCVFKLGHIACSEVSKSVLNMYAKCRRMD 73
Query: 200 TARLLFDQIPLADLVSCNTLMAGYSFNGLDQEALETFRRI-LTVGLKPNVSTFSSVIPVC 258
+ +F Q+ D V N ++ G S + +E + F+ + KP+ TF+ V+P+C
Sbjct: 74 DCQKMFRQMDSLDPVVWNIVLTGLSVS-CGRETMRFFKAMHFADEPKPSSVTFAIVLPLC 132
Query: 259 TRLGHFCFGKSLHGFTIKSGYLFDDFLVPALISMYAG-DLDLSTARKLFDSLLEKNASVW 317
RLG GKS+H + IK+G D + AL+SMYA A FD + +K+ W
Sbjct: 133 VRLGDSYNGKSMHSYIIKAGLEKDTLVGNALVSMYAKFGFIFPDAYTAFDGIADKDVVSW 192
Query: 318 NAMISAYTQSKKFFEAFEIFRQMIRAEMQPDLVTFVSIIPSC---ENYCSFQCGESLTAC 374
NA+I+ ++++ +AF F M++ +P+ T +++P C + + + G + +
Sbjct: 193 NAIIAGFSENNMMADAFRSFCLMLKEPTEPNYATIANVLPVCASMDKNIACRSGRQIHSY 252
Query: 375 VI-KNGLGNQPSVLTALLSMYAKLGNIDSAKFLFDQIPNRNLLCWNAMMSAYVRNRFWDA 433
V+ ++ L V +L+S Y ++G I+ A LF ++ +++L+ WN +++ Y N W
Sbjct: 253 VVQRSWLQTHVFVCNSLVSFYLRVGRIEEAASLFTRMGSKDLVSWNVVIAGYASNCEWFK 312
Query: 434 SLAVFRQMQFAG-LNPDAVSIISVLSGCSKLDDVLLGKSAHAFSLRKG-IVSNLDVLNAL 491
+ +F + G ++PD+V+IIS+L C++L D+ GK H++ LR ++ + V NAL
Sbjct: 313 AFQLFHNLVHKGDVSPDSVTIISILPVCAQLTDLASGKEIHSYILRHSYLLEDTSVGNAL 372
Query: 492 LMFYSDGGQFSYAFTLFHRMSTRSSVSWNTLISRCVQNGAVEEAVILLQRMQKEGVELDM 551
+ FY+ G S A+ F MST+ +SWN ++ + + + LL + E + LD
Sbjct: 373 ISFYARFGDTSAAYWAFSLMSTKDIISWNAILDAFADSPKQFQFLNLLHHLLNEAITLDS 432
Query: 552 VTLISFLP---NLNKNGNIKQGMVIHGYAIKTGCVAD----------------------- 585
VT++S L N+ G +K+ +HGY++K G + D
Sbjct: 433 VTILSLLKFCINVQGIGKVKE---VHGYSVKAGLLHDEEEPKLGNALLDAYAKCGNVEYA 489
Query: 586 ------------VTFLNALITMYCNCGSTNDGRLCLLLFQMGDKREISLWNAIISVYVQT 633
+ N+L++ Y N GS +D ++ LF +++ W+ ++ +Y ++
Sbjct: 490 HKIFLGLSERRTLVSYNSLLSGYVNSGSHDDAQM---LFTEMSTTDLTTWSLMVRIYAES 546
Query: 634 NKAKQAVAFFTELLGAGLEPDNVTVLSIISAGVLINSLNLTHSLMAFVIRKGLDKHVAVS 693
+A+ F E+ G+ P+ VT+++++ + SL+L ++IR GL + +
Sbjct: 547 CCPNEAIGVFREIQARGMRPNTVTIMNLLPVCAQLASLHLVRQCHGYIIRGGLGD-IRLK 605
Query: 694 NALMDSYVRCGNISMARKLFGSLIYKDAFSWSVMINGYGLYGDGEAALELFKQMQLSGVR 753
L+D Y +CG++ A +F S +D ++ M+ GY ++G G+ AL ++ M S ++
Sbjct: 606 GTLLDVYAKCGSLKHAYSVFQSDARRDLVMFTAMVAGYAVHGRGKEALMIYSHMTESNIK 665
Query: 754 PNEITYLGVLSACSHAGLVEQSKMVFKSM-VEHGISQKMEHYACMVDLLGRTGHLNEAFI 812
P+ + +L+AC HAGL++ ++ S+ HG+ ME YAC VDL+ R G L++A+
Sbjct: 666 PDHVFITTMLTACCHAGLIQDGLQIYDSIRTVHGMKPTMEQYACAVDLIARGGRLDDAYS 725
Query: 813 FVKKLPCKPSVSILESLLGACRIHGNVELGEIISGMLFEMDPENPGSYVMLHNIYASAGR 872
FV ++P +P+ +I +LL AC + ++LG ++ L + + ++ G++V++ N+YA+ +
Sbjct: 726 FVTQMPVEPNANIWGTLLRACTTYNRMDLGHSVANHLLQAESDDTGNHVLISNMYAADAK 785
Query: 873 WEDAYRVRSCMKRSRLKKVPGFS 895
WE +R+ MK+ +KK G S
Sbjct: 786 WEGVMELRNLMKKKEMKKPAGCS 808
Score = 202 bits (514), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 158/655 (24%), Positives = 300/655 (45%), Gaps = 59/655 (9%)
Query: 230 QEALETFRRILTVGLKPNVSTFSSVIPVCTRLGHFCFGKSLHGFTIKSGYLFDDFLVPAL 289
++ ++ FR L G + F V+ C + G++LHG K G++ + ++
Sbjct: 5 RQFVQNFR--LLSGFGTDHRVFLDVVKACASVSDLTSGRALHGCVFKLGHIACSEVSKSV 62
Query: 290 ISMYAGDLDLSTARKLFDSLLEKNASVWNAMISAYT-----QSKKFFEAFEIFRQMIRAE 344
++MYA + +K+F + + VWN +++ + ++ +FF+A E
Sbjct: 63 LNMYAKCRRMDDCQKMFRQMDSLDPVVWNIVLTGLSVSCGRETMRFFKAMH-----FADE 117
Query: 345 MQPDLVTFVSIIPSCENYCSFQCGESLTACVIKNGLGNQPSVLTALLSMYAKLGNI-DSA 403
+P VTF ++P C G+S+ + +IK GL V AL+SMYAK G I A
Sbjct: 118 PKPSSVTFAIVLPLCVRLGDSYNGKSMHSYIIKAGLEKDTLVGNALVSMYAKFGFIFPDA 177
Query: 404 KFLFDQIPNRNLLCWNAMMSAYVRNRFWDASLAVFRQMQFAGLNPDAVSIISVLSGCSKL 463
FD I +++++ WNA+++ + N + F M P+ +I +VL C+ +
Sbjct: 178 YTAFDGIADKDVVSWNAIIAGFSENNMMADAFRSFCLMLKEPTEPNYATIANVLPVCASM 237
Query: 464 DDVLL---GKSAHAFSL-RKGIVSNLDVLNALLMFYSDGGQFSYAFTLFHRMSTRSSVSW 519
D + G+ H++ + R + +++ V N+L+ FY G+ A +LF RM ++ VSW
Sbjct: 238 DKNIACRSGRQIHSYVVQRSWLQTHVFVCNSLVSFYLRVGRIEEAASLFTRMGSKDLVSW 297
Query: 520 NTLISRCVQNGAVEEAVILLQRMQKEG-VELDMVTLISFLPNLNKNGNIKQGMVIHGYAI 578
N +I+ N +A L + +G V D VT+IS LP + ++ G IH Y +
Sbjct: 298 NVVIAGYASNCEWFKAFQLFHNLVHKGDVSPDSVTIISILPVCAQLTDLASGKEIHSYIL 357
Query: 579 K-TGCVADVTFLNALITMYCNCGSTNDGRLCLLLFQMGDKREISLWNAIISVYVQTNKAK 637
+ + + D + NALI+ Y G T+ F + ++I WNAI+ + + K
Sbjct: 358 RHSYLLEDTSVGNALISFYARFGDTSAAYWA---FSLMSTKDIISWNAILDAFADSPKQF 414
Query: 638 QAVAFFTELLGAGLEPDNVTVLSIISAGVLINSLNLTHSLMAFVIRKGL---DKHVAVSN 694
Q + LL + D+VT+LS++ + + + + + ++ GL ++ + N
Sbjct: 415 QFLNLLHHLLNEAITLDSVTILSLLKFCINVQGIGKVKEVHGYSVKAGLLHDEEEPKLGN 474
Query: 695 ALMDSYVRCGNISMARK--------------------------------LFGSLIYKDAF 722
AL+D+Y +CGN+ A K LF + D
Sbjct: 475 ALLDAYAKCGNVEYAHKIFLGLSERRTLVSYNSLLSGYVNSGSHDDAQMLFTEMSTTDLT 534
Query: 723 SWSVMINGYGLYGDGEAALELFKQMQLSGVRPNEITYLGVLSACSHAGLVEQSKMVFKSM 782
+WS+M+ Y A+ +F+++Q G+RPN +T + +L C+ + + +
Sbjct: 535 TWSLMVRIYAESCCPNEAIGVFREIQARGMRPNTVTIMNLLPVCAQLASLHLVRQCHGYI 594
Query: 783 VEHGISQKMEHYACMVDLLGRTGHLNEAFIFVKKLPCKPSVSILESLLGACRIHG 837
+ G+ + ++D+ + G L A+ V + + + + +++ +HG
Sbjct: 595 IRGGLGD-IRLKGTLLDVYAKCGSLKHAYS-VFQSDARRDLVMFTAMVAGYAVHG 647
>sp|Q0WN60|PPR48_ARATH Pentatricopeptide repeat-containing protein At1g18485
OS=Arabidopsis thaliana GN=PCMP-H8 PE=2 SV=2
Length = 970
Score = 393 bits (1010), Expect = e-108, Method: Compositional matrix adjust.
Identities = 230/758 (30%), Positives = 407/758 (53%), Gaps = 17/758 (2%)
Query: 152 FLIKACSSLSDLRIGREIHCVIF-RTGYHQNLVIQTALVDFYAKKGEMLTARLLFDQIPL 210
L++A D+ +GR+IH ++ T + V+ T ++ YA G +R +FD +
Sbjct: 89 LLLQASGKRKDIEMGRKIHQLVSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFDALRS 148
Query: 211 ADLVSCNTLMAGYSFNGLDQEALETF-RRILTVGLKPNVSTFSSVIPVCTRLGHFCFGKS 269
+L N +++ YS N L E LETF I T L P+ T+ VI C + G +
Sbjct: 149 KNLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLA 208
Query: 270 LHGFTIKSGYLFDDFLVPALISMYAGDLDLSTARKLFDSLLEKNASVWNAMISAYTQSKK 329
+HG +K+G + D F+ AL+S Y ++ A +LFD + E+N WN+MI ++ +
Sbjct: 209 VHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGF 268
Query: 330 FFEAFEIFRQMIR----AEMQPDLVTFVSIIPSCENYCSFQCGESLTACVIKNGLGNQPS 385
E+F + +M+ PD+ T V+++P C G+ + +K L +
Sbjct: 269 SEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELV 328
Query: 386 VLTALLSMYAKLGNIDSAKFLFDQIPNRNLLCWNAMMSAYVRNRFWDASLAVFRQMQFAG 445
+ AL+ MY+K G I +A+ +F N+N++ WN M+ + + V RQM G
Sbjct: 329 LNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGG 388
Query: 446 --LNPDAVSIISVLSGCSKLDDVLLGKSAHAFSLRKGIVSNLDVLNALLMFYSDGGQFSY 503
+ D V+I++ + C + K H +SL++ V N V NA + Y+ G SY
Sbjct: 389 EDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSY 448
Query: 504 AFTLFHRMSTRSSVSWNTLISRCVQNGAVEEAVILLQRMQKEGVELDMVTLISFLPNLNK 563
A +FH + +++ SWN LI Q+ ++ +M+ G+ D T+ S L +K
Sbjct: 449 AQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSK 508
Query: 564 NGNIKQGMVIHGYAIKTGCVADVTFLNALITMYCNCGSTNDGRLCLL--LFQMGDKREIS 621
+++ G +HG+ I+ D+ +++++Y +CG LC + LF + + +
Sbjct: 509 LKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCG-----ELCTVQALFDAMEDKSLV 563
Query: 622 LWNAIISVYVQTNKAKQAVAFFTELLGAGLEPDNVTVLSIISAGVLINSLNLTHSLMAFV 681
WN +I+ Y+Q +A+ F +++ G++ ++++ + A L+ SL L A+
Sbjct: 564 SWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYA 623
Query: 682 IRKGLDKHVAVSNALMDSYVRCGNISMARKLFGSLIYKDAFSWSVMINGYGLYGDGEAAL 741
++ L+ ++ +L+D Y + G+I+ + K+F L K SW+ MI GYG++G + A+
Sbjct: 624 LKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAI 683
Query: 742 ELFKQMQLSGVRPNEITYLGVLSACSHAGLVEQSKMVFKSMVEH-GISQKMEHYACMVDL 800
+LF++MQ +G P+++T+LGVL+AC+H+GL+ + M G+ ++HYAC++D+
Sbjct: 684 KLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSFGLKPNLKHYACVIDM 743
Query: 801 LGRTGHLNEAF-IFVKKLPCKPSVSILESLLGACRIHGNVELGEIISGMLFEMDPENPGS 859
LGR G L++A + +++ + V I +SLL +CRIH N+E+GE ++ LFE++PE P +
Sbjct: 744 LGRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCRIHQNLEMGEKVAAKLFELEPEKPEN 803
Query: 860 YVMLHNIYASAGRWEDAYRVRSCMKRSRLKKVPGFSLV 897
YV+L N+YA G+WED +VR M L+K G S +
Sbjct: 804 YVLLSNLYAGLGKWEDVRKVRQRMNEMSLRKDAGCSWI 841
Score = 252 bits (644), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 173/629 (27%), Positives = 309/629 (49%), Gaps = 17/629 (2%)
Query: 104 FPIIKKPCVFLQNLMIRGLSNCGLHADLLHVYIK-CRLSGCPSDDFTFPFLIKACSSLSD 162
F ++ +F N +I S L+ ++L +I+ + D FT+P +IKAC+ +SD
Sbjct: 143 FDALRSKNLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSD 202
Query: 163 LRIGREIHCVIFRTGYHQNLVIQTALVDFYAKKGEMLTARLLFDQIPLADLVSCNTLMAG 222
+ IG +H ++ +TG +++ + ALV FY G + A LFD +P +LVS N+++
Sbjct: 203 VGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRV 262
Query: 223 YSFNGLDQEAL----ETFRRILTVGLKPNVSTFSSVIPVCTRLGHFCFGKSLHGFTIKSG 278
+S NG +E+ E P+V+T +V+PVC R GK +HG+ +K
Sbjct: 263 FSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLR 322
Query: 279 YLFDDFLVPALISMYAGDLDLSTARKLFDSLLEKNASVWNAMISAYTQSKKFFEAFEIFR 338
+ L AL+ MY+ ++ A+ +F KN WN M+ ++ F++ R
Sbjct: 323 LDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLR 382
Query: 339 QMIRA--EMQPDLVTFVSIIPSCENYCSFQCGESLTACVIKNGLGNQPSVLTALLSMYAK 396
QM+ +++ D VT ++ +P C + + L +K V A ++ YAK
Sbjct: 383 QMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAK 442
Query: 397 LGNIDSAKFLFDQIPNRNLLCWNAMMSAYVRNRFWDASLAVFRQMQFAGLNPDAVSIISV 456
G++ A+ +F I ++ + WNA++ + ++ SL QM+ +GL PD+ ++ S+
Sbjct: 443 CGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSL 502
Query: 457 LSGCSKLDDVLLGKSAHAFSLRKGIVSNLDVLNALLMFYSDGGQFSYAFTLFHRMSTRSS 516
LS CSKL + LGK H F +R + +L V ++L Y G+ LF M +S
Sbjct: 503 LSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSL 562
Query: 517 VSWNTLISRCVQNGAVEEAVILLQRMQKEGVELDMVTLISFLPNLNKNGNIKQGMVIHGY 576
VSWNT+I+ +QNG + A+ + ++M G++L ++++ + +++ G H Y
Sbjct: 563 VSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAY 622
Query: 577 AIKTGCVADVTFLNALITMYCNCGSTNDGRLCLLLFQMGDKREISLWNAIISVYVQTNKA 636
A+K D +LI MY GS +F ++ + WNA+I Y A
Sbjct: 623 ALKHLLEDDAFIACSLIDMYAKNGSITQSS---KVFNGLKEKSTASWNAMIMGYGIHGLA 679
Query: 637 KQAVAFFTELLGAGLEPDNVTVLSIISAGVLINSLNLTHSLMAFVIRK----GLDKHVAV 692
K+A+ F E+ G PD++T L +++A N L H + ++ + GL ++
Sbjct: 680 KEAIKLFEEMQRTGHNPDDLTFLGVLTA---CNHSGLIHEGLRYLDQMKSSFGLKPNLKH 736
Query: 693 SNALMDSYVRCGNISMARKLFGSLIYKDA 721
++D R G + A ++ + ++A
Sbjct: 737 YACVIDMLGRAGQLDKALRVVAEEMSEEA 765
Score = 216 bits (549), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 147/577 (25%), Positives = 287/577 (49%), Gaps = 13/577 (2%)
Query: 100 ALSSFPIIKKPCVFLQNLMIRGLSNCGLHAD---LLHVYIKCRLSGCPSDDF-TFPFLIK 155
AL F I+ + + N MIR S+ G + LL ++ G D T ++
Sbjct: 241 ALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLP 300
Query: 156 ACSSLSDLRIGREIHCVIFRTGYHQNLVIQTALVDFYAKKGEMLTARLLFDQIPLADLVS 215
C+ ++ +G+ +H + + LV+ AL+D Y+K G + A+++F ++VS
Sbjct: 301 VCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVS 360
Query: 216 CNTLMAGYSFNGLDQEALETFRRILTVG--LKPNVSTFSSVIPVCTRLGHFCFGKSLHGF 273
NT++ G+S G + R++L G +K + T + +PVC K LH +
Sbjct: 361 WNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCY 420
Query: 274 TIKSGYLFDDFLVPALISMYAGDLDLSTARKLFDSLLEKNASVWNAMISAYTQSKKFFEA 333
++K +++++ + A ++ YA LS A+++F + K + WNA+I + QS +
Sbjct: 421 SLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLS 480
Query: 334 FEIFRQMIRAEMQPDLVTFVSIIPSCENYCSFQCGESLTACVIKNGLGNQPSVLTALLSM 393
+ QM + + PD T S++ +C S + G+ + +I+N L V ++LS+
Sbjct: 481 LDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSL 540
Query: 394 YAKLGNIDSAKFLFDQIPNRNLLCWNAMMSAYVRNRFWDASLAVFRQMQFAGLNPDAVSI 453
Y G + + + LFD + +++L+ WN +++ Y++N F D +L VFRQM G+ +S+
Sbjct: 541 YIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISM 600
Query: 454 ISVLSGCSKLDDVLLGKSAHAFSLRKGIVSNLDVLNALLMFYSDGGQFSYAFTLFHRMST 513
+ V CS L + LG+ AHA++L+ + + + +L+ Y+ G + + +F+ +
Sbjct: 601 MPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKE 660
Query: 514 RSSVSWNTLISRCVQNGAVEEAVILLQRMQKEGVELDMVTLISFLPNLNKNGNIKQGM-V 572
+S+ SWN +I +G +EA+ L + MQ+ G D +T + L N +G I +G+
Sbjct: 661 KSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRY 720
Query: 573 IHGYAIKTGCVADVTFLNALITMYCNCGSTNDGRLCLLLFQMGDKREISLWNAIIS---V 629
+ G ++ +I M G D L ++ +M ++ ++ +W +++S +
Sbjct: 721 LDQMKSSFGLKPNLKHYACVIDMLGRAGQL-DKALRVVAEEMSEEADVGIWKSLLSSCRI 779
Query: 630 YVQTNKAKQAVAFFTELLGAGLEPDNVTVLSIISAGV 666
+ ++ A EL +P+N +LS + AG+
Sbjct: 780 HQNLEMGEKVAAKLFEL--EPEKPENYVLLSNLYAGL 814
>sp|Q9STE1|PP333_ARATH Pentatricopeptide repeat-containing protein At4g21300
OS=Arabidopsis thaliana GN=PCMP-E36 PE=3 SV=1
Length = 857
Score = 393 bits (1009), Expect = e-108, Method: Compositional matrix adjust.
Identities = 232/751 (30%), Positives = 403/751 (53%), Gaps = 9/751 (1%)
Query: 152 FLIKACSSLSDLRIGREIHCVIFRTGYHQNLVIQTALVDFYAKKGEMLTARLLFDQIPL- 210
L++ACS+ + LR G+++H + + ++ YA G +F ++ L
Sbjct: 40 LLLQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCGKMFYRLDLR 99
Query: 211 -ADLVSCNTLMAGYSFNGLDQEALETFRRILTVGLKPNVSTFSSVIPVCTRLGHFCFGKS 269
+ + N++++ + NGL +AL + ++L G+ P+VSTF ++ C L +F G
Sbjct: 100 RSSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNF-KGID 158
Query: 270 LHGFTIKS-GYLFDDFLVPALISMYAGDLDLSTARKLFDSLLEKNASVWNAMISAYTQSK 328
T+ S G ++F+ +LI Y + KLFD +L+K+ +WN M++ Y +
Sbjct: 159 FLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCG 218
Query: 329 KFFEAFEIFRQMIRAEMQPDLVTFVSIIPSCENYCSFQCGESLTACVIKNGLGNQPSVLT 388
+ F M ++ P+ VTF ++ C + G L V+ +G+ + S+
Sbjct: 219 ALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKN 278
Query: 389 ALLSMYAKLGNIDSAKFLFDQIPNRNLLCWNAMMSAYVRNRFWDASLAVFRQMQFAGLNP 448
+LLSMY+K G D A LF + + + WN M+S YV++ + SL F +M +G+ P
Sbjct: 279 SLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLP 338
Query: 449 DAVSIISVLSGCSKLDDVLLGKSAHAFSLRKGIVSNLDVLNALLMFYSDGGQFSYAFTLF 508
DA++ S+L SK +++ K H + +R I ++ + +AL+ Y S A +F
Sbjct: 339 DAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIF 398
Query: 509 HRMSTRSSVSWNTLISRCVQNGAVEEAVILLQRMQKEGVELDMVTLISFLPNLNKNGNIK 568
+ ++ V + +IS + NG +++ + + + K + + +TL+S LP + +K
Sbjct: 399 SQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILLALK 458
Query: 569 QGMVIHGYAIKTGCVADVTFLNALITMYCNCGSTNDGRLCLLLFQMGDKREISLWNAIIS 628
G +HG+ IK G A+I MY CG N L +F+ KR+I WN++I+
Sbjct: 459 LGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMN---LAYEIFERLSKRDIVSWNSMIT 515
Query: 629 VYVQTNKAKQAVAFFTELLGAGLEPDNVTVLSIISAGVLINSLNLTHSLMAFVIRKGLDK 688
Q++ A+ F ++ +G+ D V++ + +SA + S + ++ F+I+ L
Sbjct: 516 RCAQSDNPSAAIDIFRQMGVSGICYDCVSISAALSACANLPSESFGKAIHGFMIKHSLAS 575
Query: 689 HVAVSNALMDSYVRCGNISMARKLFGSLIYKDAFSWSVMINGYGLYGDGEAALELFKQM- 747
V + L+D Y +CGN+ A +F ++ K+ SW+ +I G +G + +L LF +M
Sbjct: 576 DVYSESTLIDMYAKCGNLKAAMNVFKTMKEKNIVSWNSIIAACGNHGKLKDSLCLFHEMV 635
Query: 748 QLSGVRPNEITYLGVLSACSHAGLVEQSKMVFKSMVE-HGISQKMEHYACMVDLLGRTGH 806
+ SG+RP++IT+L ++S+C H G V++ F+SM E +GI + EHYAC+VDL GR G
Sbjct: 636 EKSGIRPDQITFLEIISSCCHVGDVDEGVRFFRSMTEDYGIQPQQEHYACVVDLFGRAGR 695
Query: 807 LNEAFIFVKKLPCKPSVSILESLLGACRIHGNVELGEIISGMLFEMDPENPGSYVMLHNI 866
L EA+ VK +P P + +LLGACR+H NVEL E+ S L ++DP N G YV++ N
Sbjct: 696 LTEAYETVKSMPFPPDAGVWGTLLGACRLHKNVELAEVASSKLMDLDPSNSGYYVLISNA 755
Query: 867 YASAGRWEDAYRVRSCMKRSRLKKVPGFSLV 897
+A+A WE +VRS MK ++K+PG+S +
Sbjct: 756 HANAREWESVTKVRSLMKEREVQKIPGYSWI 786
Score = 252 bits (644), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 196/735 (26%), Positives = 352/735 (47%), Gaps = 27/735 (3%)
Query: 116 NLMIRGLSNCGLHADLLHVYIKCRLSGCPSDDFTFPFLIKACSSLSDLRIGREIHCVIFR 175
N +I GL L Y K G D TFP L+KAC +L + + + +
Sbjct: 107 NSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFKGIDFLSDTVSS 166
Query: 176 TGYHQNLVIQTALVDFYAKKGEMLTARLLFDQIPLADLVSCNTLMAGYSFNGLDQEALET 235
G N + ++L+ Y + G++ LFD++ D V N ++ GY+ G ++
Sbjct: 167 LGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGALDSVIKG 226
Query: 236 FRRILTVGLKPNVSTFSSVIPVCTRLGHFCFGKSLHGFTIKSGYLFDDFLVPALISMYAG 295
F + + PN TF V+ VC G LHG + SG F+ + +L+SMY+
Sbjct: 227 FSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSK 286
Query: 296 DLDLSTARKLFDSLLEKNASVWNAMISAYTQSKKFFEAFEIFRQMIRAEMQPDLVTFVSI 355
A KLF + + WN MIS Y QS E+ F +MI + + PD +TF S+
Sbjct: 287 CGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSL 346
Query: 356 IPSCENYCSFQCGESLTACVIKNGLGNQPSVLTALLSMYAKLGNIDSAKFLFDQIPNRNL 415
+PS + + + + + ++++ + + +AL+ Y K + A+ +F Q + ++
Sbjct: 347 LPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIFSQCNSVDV 406
Query: 416 LCWNAMMSAYVRNRFWDASLAVFRQMQFAGLNPDAVSIISVLSGCSKLDDVLLGKSAHAF 475
+ + AM+S Y+ N + SL +FR + ++P+ ++++S+L L + LG+ H F
Sbjct: 407 VVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILLALKLGRELHGF 466
Query: 476 SLRKGIVSNLDVLNALLMFYSDGGQFSYAFTLFHRMSTRSSVSWNTLISRCVQNGAVEEA 535
++KG + ++ A++ Y+ G+ + A+ +F R+S R VSWN++I+RC Q+ A
Sbjct: 467 IIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRDIVSWNSMITRCAQSDNPSAA 526
Query: 536 VILLQRMQKEGVELDMVTLISFLPNLNKNGNIKQGMVIHGYAIKTGCVADVTFLNALITM 595
+ + ++M G+ D V++ + L + G IHG+ IK +DV + LI M
Sbjct: 527 IDIFRQMGVSGICYDCVSISAALSACANLPSESFGKAIHGFMIKHSLASDVYSESTLIDM 586
Query: 596 YCNCGSTNDGRLCLLLFQMGDKREISLWNAIISVYVQTNKAKQAVAFFTELL-GAGLEPD 654
Y CG+ + + +F+ ++ I WN+II+ K K ++ F E++ +G+ PD
Sbjct: 587 YAKCGNL---KAAMNVFKTMKEKNIVSWNSIIAACGNHGKLKDSLCLFHEMVEKSGIRPD 643
Query: 655 NVTVLSIISA----GVLINSLNLTHSLMAFVIRKGLDKHVAVSNALMDSYVRCGNISMAR 710
+T L IIS+ G + + S+ + +H A ++D + R G ++ A
Sbjct: 644 QITFLEIISSCCHVGDVDEGVRFFRSMTEDYGIQPQQEHYA---CVVDLFGRAGRLTEAY 700
Query: 711 KLFGSLIY-KDAFSWSVMINGYGLYGDGEAALELFKQMQLSGVRPNEITYLGVLSACSHA 769
+ S+ + DA W ++ L+ + E L +L + P+ Y VL + +HA
Sbjct: 701 ETVKSMPFPPDAGVWGTLLGACRLHKNVE--LAEVASSKLMDLDPSNSGYY-VLISNAHA 757
Query: 770 GLVE-QSKMVFKSMVEHGISQKMEHYACMVDLLGRTGHLNEAFIFVKKLPCKPS----VS 824
E +S +S+++ QK+ Y+ +++ RT HL FV P S
Sbjct: 758 NAREWESVTKVRSLMKEREVQKIPGYS-WIEINKRT-HL-----FVSGDVNHPESSHIYS 810
Query: 825 ILESLLGACRIHGNV 839
+L SLLG R+ G +
Sbjct: 811 LLNSLLGELRLEGYI 825
Score = 233 bits (593), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 127/467 (27%), Positives = 254/467 (54%), Gaps = 2/467 (0%)
Query: 106 IIKKPCVFLQNLMIRGLSNCGLHADLLHVYIKCRLSGCPSDDFTFPFLIKACSSLSDLRI 165
+++K CV + N+M+ G + CG ++ + R+ + TF ++ C+S + +
Sbjct: 199 VLQKDCV-IWNVMLNGYAKCGALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDL 257
Query: 166 GREIHCVIFRTGYHQNLVIQTALVDFYAKKGEMLTARLLFDQIPLADLVSCNTLMAGYSF 225
G ++H ++ +G I+ +L+ Y+K G A LF + AD V+ N +++GY
Sbjct: 258 GVQLHGLVVVSGVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQ 317
Query: 226 NGLDQEALETFRRILTVGLKPNVSTFSSVIPVCTRLGHFCFGKSLHGFTIKSGYLFDDFL 285
+GL +E+L F +++ G+ P+ TFSS++P ++ + + K +H + ++ D FL
Sbjct: 318 SGLMEESLTFFYEMISSGVLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFL 377
Query: 286 VPALISMYAGDLDLSTARKLFDSLLEKNASVWNAMISAYTQSKKFFEAFEIFRQMIRAEM 345
ALI Y +S A+ +F + V+ AMIS Y + + ++ E+FR +++ ++
Sbjct: 378 TSALIDAYFKCRGVSMAQNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKI 437
Query: 346 QPDLVTFVSIIPSCENYCSFQCGESLTACVIKNGLGNQPSVLTALLSMYAKLGNIDSAKF 405
P+ +T VSI+P + + G L +IK G N+ ++ A++ MYAK G ++ A
Sbjct: 438 SPNEITLVSILPVIGILLALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYE 497
Query: 406 LFDQIPNRNLLCWNAMMSAYVRNRFWDASLAVFRQMQFAGLNPDAVSIISVLSGCSKLDD 465
+F+++ R+++ WN+M++ ++ A++ +FRQM +G+ D VSI + LS C+ L
Sbjct: 498 IFERLSKRDIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICYDCVSISAALSACANLPS 557
Query: 466 VLLGKSAHAFSLRKGIVSNLDVLNALLMFYSDGGQFSYAFTLFHRMSTRSSVSWNTLISR 525
GK+ H F ++ + S++ + L+ Y+ G A +F M ++ VSWN++I+
Sbjct: 558 ESFGKAIHGFMIKHSLASDVYSESTLIDMYAKCGNLKAAMNVFKTMKEKNIVSWNSIIAA 617
Query: 526 CVQNGAVEEAVILLQRM-QKEGVELDMVTLISFLPNLNKNGNIKQGM 571
C +G +++++ L M +K G+ D +T + + + G++ +G+
Sbjct: 618 CGNHGKLKDSLCLFHEMVEKSGIRPDQITFLEIISSCCHVGDVDEGV 664
Score = 52.4 bits (124), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/229 (20%), Positives = 100/229 (43%), Gaps = 3/229 (1%)
Query: 98 HIALSSFPIIKKPCVFLQNLMIRGLSNCGLHADLLHVYIKCRLSGCPSDDFTFPFLIKAC 157
++A F + K + N MI + + + ++ + +SG D + + AC
Sbjct: 493 NLAYEIFERLSKRDIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICYDCVSISAALSAC 552
Query: 158 SSLSDLRIGREIHCVIFRTGYHQNLVIQTALVDFYAKKGEMLTARLLFDQIPLADLVSCN 217
++L G+ IH + + ++ ++ L+D YAK G + A +F + ++VS N
Sbjct: 553 ANLPSESFGKAIHGFMIKHSLASDVYSESTLIDMYAKCGNLKAAMNVFKTMKEKNIVSWN 612
Query: 218 TLMAGYSFNGLDQEALETFRRIL-TVGLKPNVSTFSSVIPVCTRLGHFCFG-KSLHGFTI 275
+++A +G +++L F ++ G++P+ TF +I C +G G + T
Sbjct: 613 SIIAACGNHGKLKDSLCLFHEMVEKSGIRPDQITFLEIISSCCHVGDVDEGVRFFRSMTE 672
Query: 276 KSGYLFDDFLVPALISMYAGDLDLSTARKLFDSL-LEKNASVWNAMISA 323
G ++ ++ L+ A + S+ +A VW ++ A
Sbjct: 673 DYGIQPQQEHYACVVDLFGRAGRLTEAYETVKSMPFPPDAGVWGTLLGA 721
>sp|Q9SN39|PP320_ARATH Pentatricopeptide repeat-containing protein At4g18750,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H45 PE=2
SV=1
Length = 871
Score = 390 bits (1002), Expect = e-107, Method: Compositional matrix adjust.
Identities = 222/671 (33%), Positives = 370/671 (55%), Gaps = 11/671 (1%)
Query: 233 LETFRRILTVGLKPNVS--TFSSVIPVCTRLGHFCFGKSLHGFTIKSGYLFDDFLVPALI 290
LE ++L V K ++ T SV+ +C GK + F +G++ D L L
Sbjct: 77 LENAVKLLCVSGKWDIDPRTLCSVLQLCADSKSLKDGKEVDNFIRGNGFVIDSNLGSKLS 136
Query: 291 SMYAGDLDLSTARKLFDSLLEKNASVWNAMISAYTQSKKFFEAFEIFRQMIRAEMQPDLV 350
MY DL A ++FD + + A WN +++ +S F + +F++M+ + ++ D
Sbjct: 137 LMYTNCGDLKEASRVFDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSY 196
Query: 351 TFVSIIPSCENYCSFQCGESLTACVIKNGLGNQPSVLTALLSMYAKLGNIDSAKFLFDQI 410
TF + S + S GE L ++K+G G + SV +L++ Y K +DSA+ +FD++
Sbjct: 197 TFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEM 256
Query: 411 PNRNLLCWNAMMSAYVRNRFWDASLAVFRQMQFAGLNPDAVSIISVLSGCSKLDDVLLGK 470
R+++ WN++++ YV N + L+VF QM +G+ D +I+SV +GC+ + LG+
Sbjct: 257 TERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGR 316
Query: 471 SAHAFSLRKGIVSNLDVLNALLMFYSDGGQFSYAFTLFHRMSTRSSVSWNTLISRCVQNG 530
+ H+ ++ N LL YS G A +F MS RS VS+ ++I+ + G
Sbjct: 317 AVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREG 376
Query: 531 AVEEAVILLQRMQKEGVELDMVTLISFLPNLNKNGNIKQGMVIHGYAIKTGCVADVTFLN 590
EAV L + M++EG+ D+ T+ + L + + +G +H + + D+ N
Sbjct: 377 LAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSN 436
Query: 591 ALITMYCNCGSTNDGRLCLLLFQMGDKREISLWNAIISVYVQTNKAKQAVAFFTELLGAG 650
AL+ MY CGS + L +F ++I WN II Y + A +A++ F LL
Sbjct: 437 ALMDMYAKCGSMQEAEL---VFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEK 493
Query: 651 -LEPDNVTVLSIISAGVLINSLNLTHSLMAFVIRKGL--DKHVAVSNALMDSYVRCGNIS 707
PD TV ++ A +++ + + +++R G D+HVA N+L+D Y +CG +
Sbjct: 494 RFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVA--NSLVDMYAKCGALL 551
Query: 708 MARKLFGSLIYKDAFSWSVMINGYGLYGDGEAALELFKQMQLSGVRPNEITYLGVLSACS 767
+A LF + KD SW+VMI GYG++G G+ A+ LF QM+ +G+ +EI+++ +L ACS
Sbjct: 552 LAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACS 611
Query: 768 HAGLVEQSKMVFKSMV-EHGISQKMEHYACMVDLLGRTGHLNEAFIFVKKLPCKPSVSIL 826
H+GLV++ F M E I +EHYAC+VD+L RTG L +A+ F++ +P P +I
Sbjct: 612 HSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIW 671
Query: 827 ESLLGACRIHGNVELGEIISGMLFEMDPENPGSYVMLHNIYASAGRWEDAYRVRSCMKRS 886
+LL CRIH +V+L E ++ +FE++PEN G YV++ NIYA A +WE R+R + +
Sbjct: 672 GALLCGCRIHHDVKLAEKVAEKVFELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQR 731
Query: 887 RLKKVPGFSLV 897
L+K PG S +
Sbjct: 732 GLRKNPGCSWI 742
Score = 224 bits (570), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 166/696 (23%), Positives = 335/696 (48%), Gaps = 23/696 (3%)
Query: 146 DDFTFPFLIKACSSLSDLRIGREIHCVIFRTGYHQNLVIQTALVDFYAKKGEMLTARLLF 205
D T +++ C+ L+ G+E+ I G+ + + + L Y G++ A +F
Sbjct: 93 DPRTLCSVLQLCADSKSLKDGKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVF 152
Query: 206 DQIPLADLVSCNTLMAGYSFNGLDQEALETFRRILTVGLKPNVSTFSSVIPVCTRLGHFC 265
D++ + + N LM + +G ++ F+++++ G++ + TFS V + L
Sbjct: 153 DEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVH 212
Query: 266 FGKSLHGFTIKSGYLFDDFLVPALISMYAGDLDLSTARKLFDSLLEKNASVWNAMISAYT 325
G+ LHGF +KSG+ + + +L++ Y + + +ARK+FD + E++ WN++I+ Y
Sbjct: 213 GGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYV 272
Query: 326 QSKKFFEAFEIFRQMIRAEMQPDLVTFVSIIPSCENYCSFQCGESLTACVIKNGLGNQPS 385
+ + +F QM+ + ++ DL T VS+ C + G ++ + +K +
Sbjct: 273 SNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDR 332
Query: 386 VLTALLSMYAKLGNIDSAKFLFDQIPNRNLLCWNAMMSAYVRNRFWDASLAVFRQMQFAG 445
LL MY+K G++DSAK +F ++ +R+++ + +M++ Y R ++ +F +M+ G
Sbjct: 333 FCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEG 392
Query: 446 LNPDAVSIISVLSGCSKLDDVLLGKSAHAFSLRKGIVSNLDVLNALLMFYSDGGQFSYAF 505
++PD ++ +VL+ C++ + GK H + + ++ V NAL+ Y+ G A
Sbjct: 393 ISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAE 452
Query: 506 TLFHRMSTRSSVSWNTLISRCVQNGAVEEAVILLQRMQKEG-VELDMVTLISFLPNLNKN 564
+F M + +SWNT+I +N EA+ L + +E D T+ LP
Sbjct: 453 LVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASL 512
Query: 565 GNIKQGMVIHGYAIKTGCVADVTFLNALITMYCNCGSTNDGRLCLLLFQMGDKREISLWN 624
+G IHGY ++ G +D N+L+ MY CG+ L +LF +++ W
Sbjct: 513 SAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGAL---LLAHMLFDDIASKDLVSWT 569
Query: 625 AIISVYVQTNKAKQAVAFFTELLGAGLEPDNVTVLSII---SAGVLINSLNLTHSLMAFV 681
+I+ Y K+A+A F ++ AG+E D ++ +S++ S L++ ++M
Sbjct: 570 VMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHE 629
Query: 682 IRKGLDKHVAVSNALMDSYVRCGNISMARKLFGSL-IYKDAFSWSVMINGYGLYGDGEAA 740
+ ++ V ++D R G++ A + ++ I DA W ++ G ++ D + A
Sbjct: 630 CK--IEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLA 687
Query: 741 LELFKQMQLSGVRPNEITYLGVLSAC-SHAGLVEQSKMVFKSMVEHGISQKMEHYAC-MV 798
++ + ++ + P Y +++ + A EQ K + K + + G+ + + C +
Sbjct: 688 EKVAE--KVFELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRK---NPGCSWI 742
Query: 799 DLLGRTGHLNEAFIFVKKLPCKPSVSILESLLGACR 834
++ GR IFV P +E+ L R
Sbjct: 743 EIKGRVN------IFVAGDSSNPETENIEAFLRKVR 772
Score = 220 bits (561), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 122/468 (26%), Positives = 246/468 (52%), Gaps = 1/468 (0%)
Query: 104 FPIIKKPCVFLQNLMIRGLSNCGLHADLLHVYIKCRLSGCPSDDFTFPFLIKACSSLSDL 163
F +K N+++ L+ G + + ++ K SG D +TF + K+ SSL +
Sbjct: 152 FDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSV 211
Query: 164 RIGREIHCVIFRTGYHQNLVIQTALVDFYAKKGEMLTARLLFDQIPLADLVSCNTLMAGY 223
G ++H I ++G+ + + +LV FY K + +AR +FD++ D++S N+++ GY
Sbjct: 212 HGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGY 271
Query: 224 SFNGLDQEALETFRRILTVGLKPNVSTFSSVIPVCTRLGHFCFGKSLHGFTIKSGYLFDD 283
NGL ++ L F ++L G++ +++T SV C G+++H +K+ + +D
Sbjct: 272 VSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSRED 331
Query: 284 FLVPALISMYAGDLDLSTARKLFDSLLEKNASVWNAMISAYTQSKKFFEAFEIFRQMIRA 343
L+ MY+ DL +A+ +F + +++ + +MI+ Y + EA ++F +M
Sbjct: 332 RFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEE 391
Query: 344 EMQPDLVTFVSIIPSCENYCSFQCGESLTACVIKNGLGNQPSVLTALLSMYAKLGNIDSA 403
+ PD+ T +++ C Y G+ + + +N LG V AL+ MYAK G++ A
Sbjct: 392 GISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEA 451
Query: 404 KFLFDQIPNRNLLCWNAMMSAYVRNRFWDASLAVFR-QMQFAGLNPDAVSIISVLSGCSK 462
+ +F ++ ++++ WN ++ Y +N + + +L++F ++ +PD ++ VL C+
Sbjct: 452 ELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACAS 511
Query: 463 LDDVLLGKSAHAFSLRKGIVSNLDVLNALLMFYSDGGQFSYAFTLFHRMSTRSSVSWNTL 522
L G+ H + +R G S+ V N+L+ Y+ G A LF ++++ VSW +
Sbjct: 512 LSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVM 571
Query: 523 ISRCVQNGAVEEAVILLQRMQKEGVELDMVTLISFLPNLNKNGNIKQG 570
I+ +G +EA+ L +M++ G+E D ++ +S L + +G + +G
Sbjct: 572 IAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEG 619
>sp|Q9CA56|PP121_ARATH Pentatricopeptide repeat-containing protein At1g74600,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-E69 PE=2
SV=1
Length = 895
Score = 389 bits (998), Expect = e-107, Method: Compositional matrix adjust.
Identities = 248/825 (30%), Positives = 420/825 (50%), Gaps = 15/825 (1%)
Query: 79 LPLPALALRTLEAFEITSYHIALSS--FPIIKKPCVFLQNLMIRGLSNCGLHADLLHVYI 136
LP ++L ++ S +A ++ F I +P V N+MI G L + L +
Sbjct: 80 LPFDVFLTKSLLSWYSNSGSMADAAKLFDTIPQPDVVSCNIMISGYKQHRLFEESLRFFS 139
Query: 137 KCRLSGCPSDDFTFPFLIKACSSLSDLRIGREIHCVIFRTGYHQNLVIQTALVDFYAKKG 196
K G +++ ++ +I ACS+L + C + GY V+++AL+D ++K
Sbjct: 140 KMHFLGFEANEISYGSVISACSALQAPLFSELVCCHTIKMGYFFYEVVESALIDVFSKNL 199
Query: 197 EMLTARLLFDQIPLADLVSCNTLMAGYSFNGLDQEALETFRRILTVGLKPNVSTFSSVIP 256
A +F A++ NT++AG N + F + KP+ T+SSV+
Sbjct: 200 RFEDAYKVFRDSLSANVYCWNTIIAGALRNQNYGAVFDLFHEMCVGFQKPDSYTYSSVLA 259
Query: 257 VCTRLGHFCFGKSLHGFTIKSGYLFDDFLVPALISMYAGDLDLSTARKLFDSLLEKNASV 316
C L FGK + IK G D F+ A++ +YA ++ A ++F + +
Sbjct: 260 ACASLEKLRFGKVVQARVIKCGAE-DVFVCTAIVDLYAKCGHMAEAMEVFSRIPNPSVVS 318
Query: 317 WNAMISAYTQSKKFFEAFEIFRQMIRAEMQPDLVTFVSIIPSCENYCSFQCGESLTACVI 376
W M+S YT+S F A EIF++M + ++ + T S+I +C + A V
Sbjct: 319 WTVMLSGYTKSNDAFSALEIFKEMRHSGVEINNCTVTSVISACGRPSMVCEASQVHAWVF 378
Query: 377 KNGLGNQPSVLTALLSMYAKLGNIDSAKFLF---DQIPNRNLLCWNAMMSAYVRNRFWDA 433
K+G SV AL+SMY+K G+ID ++ +F D I +N++ N M++++ +++
Sbjct: 379 KSGFYLDSSVAAALISMYSKSGDIDLSEQVFEDLDDIQRQNIV--NVMITSFSQSKKPGK 436
Query: 434 SLAVFRQMQFAGLNPDAVSIISVLSGCSKLDDVLLGKSAHAFSLRKGIVSNLDVLNALLM 493
++ +F +M GL D S+ S+LS LD + LGK H ++L+ G+V +L V ++L
Sbjct: 437 AIRLFTRMLQEGLRTDEFSVCSLLS---VLDCLNLGKQVHGYTLKSGLVLDLTVGSSLFT 493
Query: 494 FYSDGGQFSYAFTLFHRMSTRSSVSWNTLISRCVQNGAVEEAVILLQRMQKEGVELDMVT 553
YS G ++ LF + + + W ++IS + G + EA+ L M +G D T
Sbjct: 494 LYSKCGSLEESYKLFQGIPFKDNACWASMISGFNEYGYLREAIGLFSEMLDDGTSPDEST 553
Query: 554 LISFLPNLNKNGNIKQGMVIHGYAIKTGCVADVTFLNALITMYCNCGSTNDGRLCLLLFQ 613
L + L + + ++ +G IHGY ++ G + +AL+ MY CGS R
Sbjct: 554 LAAVLTVCSSHPSLPRGKEIHGYTLRAGIDKGMDLGSALVNMYSKCGSLKLARQVYDRLP 613
Query: 614 MGDKREISLWNAIISVYVQTNKAKQAVAFFTELLGAGLEPDNVTVLSIISAGVLINSLNL 673
D S ++IS Y Q + F +++ +G D+ + SI+ A L + +L
Sbjct: 614 ELDPVSCS---SLISGYSQHGLIQDGFLLFRDMVMSGFTMDSFAISSILKAAALSDESSL 670
Query: 674 THSLMAFVIRKGLDKHVAVSNALMDSYVRCGNISMARKLFGSLIYKDAFSWSVMINGYGL 733
+ A++ + GL +V ++L+ Y + G+I K F + D +W+ +I Y
Sbjct: 671 GAQVHAYITKIGLCTEPSVGSSLLTMYSKFGSIDDCCKAFSQINGPDLIAWTALIASYAQ 730
Query: 734 YGDGEAALELFKQMQLSGVRPNEITYLGVLSACSHAGLVEQSKMVFKSMV-EHGISQKME 792
+G AL+++ M+ G +P+++T++GVLSACSH GLVE+S SMV ++GI +
Sbjct: 731 HGKANEALQVYNLMKEKGFKPDKVTFVGVLSACSHGGLVEESYFHLNSMVKDYGIEPENR 790
Query: 793 HYACMVDLLGRTGHLNEAFIFVKKLPCKPSVSILESLLGACRIHGNVELGEIISGMLFEM 852
HY CMVD LGR+G L EA F+ + KP + +LL AC+IHG VELG++ + E+
Sbjct: 791 HYVCMVDALGRSGRLREAESFINNMHIKPDALVWGTLLAACKIHGEVELGKVAAKKAIEL 850
Query: 853 DPENPGSYVMLHNIYASAGRWEDAYRVRSCMKRSRLKKVPGFSLV 897
+P + G+Y+ L NI A G W++ R MK + ++K PG+S V
Sbjct: 851 EPSDAGAYISLSNILAEVGEWDEVEETRKLMKGTGVQKEPGWSSV 895
Score = 280 bits (715), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 179/637 (28%), Positives = 332/637 (52%), Gaps = 15/637 (2%)
Query: 144 PSDDFTFPFLIKACSSLSDLRIGREIHCVIFRTGYHQ-NLVIQTALVDFYAKKGEMLTAR 202
P + F F F ++ S L +LR + + + R ++ + +L+ +Y+ G M A
Sbjct: 46 PFNPFRF-FNDQSNSRLCNLRTTKILQAHLLRRYLLPFDVFLTKSLLSWYSNSGSMADAA 104
Query: 203 LLFDQIPLADLVSCNTLMAGYSFNGLDQEALETFRRILTVGLKPNVSTFSSVIPVCTRLG 262
LFD IP D+VSCN +++GY + L +E+L F ++ +G + N ++ SVI C+ L
Sbjct: 105 KLFDTIPQPDVVSCNIMISGYKQHRLFEESLRFFSKMHFLGFEANEISYGSVISACSALQ 164
Query: 263 HFCFGKSLHGFTIKSGYLFDDFLVPALISMYAGDLDLSTARKLFDSLLEKNASVWNAMIS 322
F + + TIK GY F + + ALI +++ +L A K+F L N WN +I+
Sbjct: 165 APLFSELVCCHTIKMGYFFYEVVESALIDVFSKNLRFEDAYKVFRDSLSANVYCWNTIIA 224
Query: 323 AYTQSKKFFEAFEIFRQMIRAEMQPDLVTFVSIIPSCENYCSFQCGESLTACVIKNGLGN 382
+++ + F++F +M +PD T+ S++ +C + + G+ + A VIK G
Sbjct: 225 GALRNQNYGAVFDLFHEMCVGFQKPDSYTYSSVLAACASLEKLRFGKVVQARVIKCG-AE 283
Query: 383 QPSVLTALLSMYAKLGNIDSAKFLFDQIPNRNLLCWNAMMSAYVRNRFWDASLAVFRQMQ 442
V TA++ +YAK G++ A +F +IPN +++ W M+S Y ++ ++L +F++M+
Sbjct: 284 DVFVCTAIVDLYAKCGHMAEAMEVFSRIPNPSVVSWTVMLSGYTKSNDAFSALEIFKEMR 343
Query: 443 FAGLNPDAVSIISVLSGCSKLDDVLLGKSAHAFSLRKGIVSNLDVLNALLMFYSDGGQFS 502
+G+ + ++ SV+S C + V HA+ + G + V AL+ YS G
Sbjct: 344 HSGVEINNCTVTSVISACGRPSMVCEASQVHAWVFKSGFYLDSSVAAALISMYSKSGDID 403
Query: 503 YAFTLFHRMS--TRSSVSWNTLISRCVQNGAVEEAVILLQRMQKEGVELDMVTLISFLPN 560
+ +F + R ++ N +I+ Q+ +A+ L RM +EG+ D ++ S L
Sbjct: 404 LSEQVFEDLDDIQRQNIV-NVMITSFSQSKKPGKAIRLFTRMLQEGLRTDEFSVCSLLSV 462
Query: 561 LNKNGNIKQGMVIHGYAIKTGCVADVTFLNALITMYCNCGSTNDGRLCLLLFQMGDKREI 620
L+ + G +HGY +K+G V D+T ++L T+Y CGS + LFQ ++
Sbjct: 463 LD---CLNLGKQVHGYTLKSGLVLDLTVGSSLFTLYSKCGSLEES---YKLFQGIPFKDN 516
Query: 621 SLWNAIISVYVQTNKAKQAVAFFTELLGAGLEPDNVTVLSIISAGVLINSLNLTHSLMAF 680
+ W ++IS + + ++A+ F+E+L G PD T+ ++++ SL + +
Sbjct: 517 ACWASMISGFNEYGYLREAIGLFSEMLDDGTSPDESTLAAVLTVCSSHPSLPRGKEIHGY 576
Query: 681 VIRKGLDKHVAVSNALMDSYVRCGNISMARKLFGSLIYKDAFSWSVMINGYGLYGDGEAA 740
+R G+DK + + +AL++ Y +CG++ +AR+++ L D S S +I+GY +G +
Sbjct: 577 TLRAGIDKGMDLGSALVNMYSKCGSLKLARQVYDRLPELDPVSCSSLISGYSQHGLIQDG 636
Query: 741 LELFKQMQLSGVRPNEITYLGVLSACSHAGLVEQSKM 777
LF+ M +SG + +L A A L ++S +
Sbjct: 637 FLLFRDMVMSGFTMDSFAISSILKA---AALSDESSL 670
>sp|Q9FIB2|PP373_ARATH Putative pentatricopeptide repeat-containing protein At5g09950
OS=Arabidopsis thaliana GN=PCMP-H35 PE=3 SV=1
Length = 995
Score = 385 bits (988), Expect = e-106, Method: Compositional matrix adjust.
Identities = 253/796 (31%), Positives = 428/796 (53%), Gaps = 19/796 (2%)
Query: 118 MIRGLSNCGLHADLLHVYIKCRLSGCPSDDFTFPFLIKACSSLSDLRI--GREIHCVIFR 175
++ G S G H + L G S+ + F +++AC + + I GR+IH ++F+
Sbjct: 73 IVSGYSRNGEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFK 132
Query: 176 TGYHQNLVIQTALVDFYAK-KGEMLTARLLFDQIPLADLVSCNTLMAGYSFNGLDQEALE 234
Y + V+ L+ Y K G + A F I + + VS N++++ YS G + A
Sbjct: 133 LSYAVDAVVSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFR 192
Query: 235 TFRRILTVGLKPNVSTFSSVIPVCTRLGH--FCFGKSLHGFTIKSGYLFDDFLVPALISM 292
F + G +P TF S++ L + + KSG L D F+ L+S
Sbjct: 193 IFSSMQYDGSRPTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSA 252
Query: 293 YAGDLDLSTARKLFDSLLEKNASVWNAMISAYTQSKKFFEAFEIFRQMIRA-EMQPD-LV 350
+A LS ARK+F+ + +NA N ++ + K EA ++F M ++ P+ V
Sbjct: 253 FAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSPESYV 312
Query: 351 TFVSIIP--SCENYCSFQCGESLTACVIKNGLGN-QPSVLTALLSMYAKLGNIDSAKFLF 407
+S P S + G + VI GL + + L++MYAK G+I A+ +F
Sbjct: 313 ILLSSFPEYSLAEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVF 372
Query: 408 DQIPNRNLLCWNAMMSAYVRNRFWDASLAVFRQMQFAGLNPDAVSIISVLSGCSKLDDVL 467
+ +++ + WN+M++ +N + ++ ++ M+ + P + ++IS LS C+ L
Sbjct: 373 YFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAK 432
Query: 468 LGKSAHAFSLRKGIVSNLDVLNALLMFYSDGGQFSYAFTLFHRMSTRSSVSWNTLISRCV 527
LG+ H SL+ GI N+ V NAL+ Y++ G + +F M VSWN++I
Sbjct: 433 LGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALA 492
Query: 528 QNG-AVEEAVILLQRMQKEGVELDMVTLISFLPNLNKNGNIKQGMVIHGYAIKTGCVADV 586
++ ++ EAV+ Q+ G +L+ +T S L ++ + G IHG A+K +
Sbjct: 493 RSERSLPEAVVCFLNAQRAGQKLNRITFSSVLSAVSSLSFGELGKQIHGLALKNNIADEA 552
Query: 587 TFLNALITMYCNCGSTNDGRLCLLLF-QMGDKREISLWNAIISVYVQTNKAKQAVAFFTE 645
T NALI Y CG DG C +F +M ++R+ WN++IS Y+ +A+
Sbjct: 553 TTENALIACYGKCGEM-DG--CEKIFSRMAERRDNVTWNSMISGYIHNELLAKALDLVWF 609
Query: 646 LLGAGLEPDNVTVLSIISAGVLINSLNLTHSLMAFVIRKGLDKHVAVSNALMDSYVRCGN 705
+L G D+ +++SA + +L + A +R L+ V V +AL+D Y +CG
Sbjct: 610 MLQTGQRLDSFMYATVLSAFASVATLERGMEVHACSVRACLESDVVVGSALVDMYSKCGR 669
Query: 706 ISMARKLFGSLIYKDAFSWSVMINGYGLYGDGEAALELFKQMQLSG-VRPNEITYLGVLS 764
+ A + F ++ ++++SW+ MI+GY +G GE AL+LF+ M+L G P+ +T++GVLS
Sbjct: 670 LDYALRFFNTMPVRNSYSWNSMISGYARHGQGEEALKLFETMKLDGQTPPDHVTFVGVLS 729
Query: 765 ACSHAGLVEQSKMVFKSMVE-HGISQKMEHYACMVDLLGRTGHLNEAFIFVKKLPCKPSV 823
ACSHAGL+E+ F+SM + +G++ ++EH++CM D+LGR G L++ F++K+P KP+V
Sbjct: 730 ACSHAGLLEEGFKHFESMSDSYGLAPRIEHFSCMADVLGRAGELDKLEDFIEKMPMKPNV 789
Query: 824 SILESLLGA-CRIHG-NVELGEIISGMLFEMDPENPGSYVMLHNIYASAGRWEDAYRVRS 881
I ++LGA CR +G ELG+ + MLF+++PEN +YV+L N+YA+ GRWED + R
Sbjct: 790 LIWRTVLGACCRANGRKAELGKKAAEMLFQLEPENAVNYVLLGNMYAAGGRWEDLVKARK 849
Query: 882 CMKRSRLKKVPGFSLV 897
MK + +KK G+S V
Sbjct: 850 KMKDADVKKEAGYSWV 865
Score = 239 bits (610), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 206/756 (27%), Positives = 360/756 (47%), Gaps = 34/756 (4%)
Query: 167 REIHCVIFRTGYHQNLVIQTALVDFYAKKGEMLTARLLFDQIPLADLVSCNTLMAGYSFN 226
R H +++ +++ + L++ Y + G+ ++AR +FD++PL + VS +++GYS N
Sbjct: 21 RFFHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSRN 80
Query: 227 GLDQEALETFRRILTVGLKPNVSTFSSVIPVCTRLGH--FCFGKSLHGFTIKSGYLFDDF 284
G +EAL R ++ G+ N F SV+ C +G FG+ +HG K Y D
Sbjct: 81 GEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAV 140
Query: 285 LVPALISMYAGDL-DLSTARKLFDSLLEKNASVWNAMISAYTQSKKFFEAFEIFRQMIRA 343
+ LISMY + + A F + KN+ WN++IS Y+Q+ AF IF M
Sbjct: 141 VSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYD 200
Query: 344 EMQPDLVTFVSIIPSCENYCSF-----QCGESLTACVIKNGLGNQPSVLTALLSMYAKLG 398
+P TF S++ + CS + E + + K+GL V + L+S +AK G
Sbjct: 201 GSRPTEYTFGSLVTTA---CSLTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSG 257
Query: 399 NIDSAKFLFDQIPNRNLLCWNAMMSAYVRNRFWDASLAVFRQMQ-FAGLNPDA-VSIISV 456
++ A+ +F+Q+ RN + N +M VR ++ + + +F M ++P++ V ++S
Sbjct: 258 SLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSPESYVILLSS 317
Query: 457 LSGCSKLDDVLL--GKSAHAFSLRKGIVSNL-DVLNALLMFYSDGGQFSYAFTLFHRMST 513
S ++V L G+ H + G+V + + N L+ Y+ G + A +F+ M+
Sbjct: 318 FPEYSLAEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTD 377
Query: 514 RSSVSWNTLISRCVQNGAVEEAVILLQRMQKEGVELDMVTLISFLPNLNKNGNIKQGMVI 573
+ SVSWN++I+ QNG EAV + M++ + TLIS L + K G I
Sbjct: 378 KDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQI 437
Query: 574 HGYAIKTGCVADVTFLNALITMYCNCGSTNDGRLCLLLFQMGDKREISLWNAIISVYVQT 633
HG ++K G +V+ NAL+T+Y G N+ C +F + + WN+II ++
Sbjct: 438 HGESLKLGIDLNVSVSNALMTLYAETGYLNE---CRKIFSSMPEHDQVSWNSIIGALARS 494
Query: 634 NKA-KQAVAFFTELLGAGLEPDNVTVLSIISAGVLINSLNLTHSLMAFVIRKGLDKHVAV 692
++ +AV F AG + + +T S++SA ++ L + ++ +
Sbjct: 495 ERSLPEAVVCFLNAQRAGQKLNRITFSSVLSAVSSLSFGELGKQIHGLALKNNIADEATT 554
Query: 693 SNALMDSYVRCGNISMARKLFGSLI-YKDAFSWSVMINGYGLYGDGEAALELFKQMQLSG 751
NAL+ Y +CG + K+F + +D +W+ MI+GY AL+L M +G
Sbjct: 555 ENALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMISGYIHNELLAKALDLVWFMLQTG 614
Query: 752 VRPNEITYLGVLSACSHAGLVEQSKMVFKSMVEHGISQKMEHYACMVDLLGRTGHLNEAF 811
R + Y VLSA + +E+ V V + + + +VD+ + G L+ A
Sbjct: 615 QRLDSFMYATVLSAFASVATLERGMEVHACSVRACLESDVVVGSALVDMYSKCGRLDYAL 674
Query: 812 IFVKKLPCKPSVSILESLLGACRIHGNVELGEIISGMLFE---MDPENPGSYVMLHNIYA 868
F +P + S S + G R HG E E + LFE +D + P +V + +
Sbjct: 675 RFFNTMPVRNSYSWNSMISGYAR-HGQGE--EALK--LFETMKLDGQTPPDHVTFVGVLS 729
Query: 869 S---AGRWEDAYRVRSCMKRSR--LKKVPGFSLVGD 899
+ AG E+ ++ M S ++ FS + D
Sbjct: 730 ACSHAGLLEEGFKHFESMSDSYGLAPRIEHFSCMAD 765
Score = 177 bits (449), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 154/562 (27%), Positives = 266/562 (47%), Gaps = 20/562 (3%)
Query: 261 LGHFCFGKSLHGFTIKSGYLFDDFLVPALISMYAGDLDLSTARKLFDSLLEKNASVWNAM 320
+GH + H K+ D +L LI+ Y D +ARK+FD + +N W +
Sbjct: 14 VGHRGAARFFHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACI 73
Query: 321 ISAYTQSKKFFEAFEIFRQMIRAEMQPDLVTFVSIIPSCENYCSFQC--GESLTACVIKN 378
+S Y+++ + EA R M++ + + FVS++ +C+ S G + + K
Sbjct: 74 VSGYSRNGEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKL 133
Query: 379 GLGNQPSVLTALLSMYAK-LGNIDSAKFLFDQIPNRNLLCWNAMMSAYVRNRFWDASLAV 437
V L+SMY K +G++ A F I +N + WN+++S Y + ++ +
Sbjct: 134 SYAVDAVVSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRI 193
Query: 438 FRQMQFAGLNPDAVSIIS-VLSGCSKLD-DVLLGKSAHAFSLRKGIVSNLDVLNALLMFY 495
F MQ+ G P + S V + CS + DV L + + G++++L V + L+ +
Sbjct: 194 FSSMQYDGSRPTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAF 253
Query: 496 SDGGQFSYAFTLFHRMSTRSSVSWNTLISRCVQNGAVEEAVILLQRMQK--EGVELDMVT 553
+ G SYA +F++M TR++V+ N L+ V+ EEA L M + V
Sbjct: 254 AKSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSPESYVI 313
Query: 554 LISFLP--NLNKNGNIKQGMVIHGYAIKTGCVA-DVTFLNALITMYCNCGSTNDGRLCLL 610
L+S P +L + +K+G +HG+ I TG V V N L+ MY CGS D R +
Sbjct: 314 LLSSFPEYSLAEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADAR--RV 371
Query: 611 LFQMGDKREISLWNAIISVYVQTNKAKQAVAFFTELLGAGLEPDNVTVLSIISAGVLINS 670
+ M DK +S WN++I+ Q +AV + + + P + T++S +S+ +
Sbjct: 372 FYFMTDKDSVS-WNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKW 430
Query: 671 LNLTHSLMAFVIRKGLDKHVAVSNALMDSYVRCGNISMARKLFGSLIYKDAFSWSVMING 730
L + ++ G+D +V+VSNALM Y G ++ RK+F S+ D SW+ +I
Sbjct: 431 AKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSII-- 488
Query: 731 YGLYGDGEAALE----LFKQMQLSGVRPNEITYLGVLSACSHAGLVEQSKMVFKSMVEHG 786
G E +L F Q +G + N IT+ VLSA S E K + +++
Sbjct: 489 -GALARSERSLPEAVVCFLNAQRAGQKLNRITFSSVLSAVSSLSFGELGKQIHGLALKNN 547
Query: 787 ISQKMEHYACMVDLLGRTGHLN 808
I+ + ++ G+ G ++
Sbjct: 548 IADEATTENALIACYGKCGEMD 569
Score = 145 bits (365), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 112/425 (26%), Positives = 198/425 (46%), Gaps = 6/425 (1%)
Query: 116 NLMIRGLSNCGLHADLLHVYIKCRLSGCPSDDFTFPFLIKACSSLSDLRIGREIHCVIFR 175
N MI GL G + + Y R FT + +C+SL ++G++IH +
Sbjct: 384 NSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQIHGESLK 443
Query: 176 TGYHQNLVIQTALVDFYAKKGEMLTARLLFDQIPLADLVSCNTLMAGYSFNGLD-QEALE 234
G N+ + AL+ YA+ G + R +F +P D VS N+++ + + EA+
Sbjct: 444 LGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALARSERSLPEAVV 503
Query: 235 TFRRILTVGLKPNVSTFSSVIPVCTRLGHFCFGKSLHGFTIKSGYLFDDFLVPALISMYA 294
F G K N TFSSV+ + L GK +HG +K+ + ALI+ Y
Sbjct: 504 CFLNAQRAGQKLNRITFSSVLSAVSSLSFGELGKQIHGLALKNNIADEATTENALIACYG 563
Query: 295 GDLDLSTARKLFDSLLEKNASV-WNAMISAYTQSKKFFEAFEIFRQMIRAEMQPDLVTFV 353
++ K+F + E+ +V WN+MIS Y ++ +A ++ M++ + D +
Sbjct: 564 KCGEMDGCEKIFSRMAERRDNVTWNSMISGYIHNELLAKALDLVWFMLQTGQRLDSFMYA 623
Query: 354 SIIPSCENYCSFQCGESLTACVIKNGLGNQPSVLTALLSMYAKLGNIDSAKFLFDQIPNR 413
+++ + + + + G + AC ++ L + V +AL+ MY+K G +D A F+ +P R
Sbjct: 624 TVLSAFASVATLERGMEVHACSVRACLESDVVVGSALVDMYSKCGRLDYALRFFNTMPVR 683
Query: 414 NLLCWNAMMSAYVRNRFWDASLAVFRQMQFAGLN-PDAVSIISVLSGCSKLDDVLLG-KS 471
N WN+M+S Y R+ + +L +F M+ G PD V+ + VLS CS + G K
Sbjct: 684 NSYSWNSMISGYARHGQGEEALKLFETMKLDGQTPPDHVTFVGVLSACSHAGLLEEGFKH 743
Query: 472 AHAFSLRKGIVSNLDVLNALLMFYSDGGQFSYAFTLFHRMSTRSSV-SWNTLISRCVQ-N 529
+ S G+ ++ + + G+ +M + +V W T++ C + N
Sbjct: 744 FESMSDSYGLAPRIEHFSCMADVLGRAGELDKLEDFIEKMPMKPNVLIWRTVLGACCRAN 803
Query: 530 GAVEE 534
G E
Sbjct: 804 GRKAE 808
>sp|O49680|PP324_ARATH Pentatricopeptide repeat-containing protein At4g19220,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E2 PE=3
SV=2
Length = 951
Score = 383 bits (984), Expect = e-105, Method: Compositional matrix adjust.
Identities = 243/804 (30%), Positives = 417/804 (51%), Gaps = 16/804 (1%)
Query: 104 FPIIKKPCVFLQNLMIRGLSNCGLHADLLHVYIKCRLSGCPSDDFTFPFLIKACSSLSDL 163
F +K+ V + N MI L+ G + + ++I+ G D T A SSL
Sbjct: 145 FDELKEKDVIVWNSMITALNQNGRYIAAVGLFIEMIHKGNEFDSTTLLLAASALSSLHLS 204
Query: 164 RIGREIHCVIFRTGYHQNLVIQTALVDFYAKKGEMLTARLLFDQIPLADLVSCNTLMAGY 223
R +HC+ TG + + AL++ YAK + +A +F + D+VS NT+M
Sbjct: 205 RKCSMLHCLAIETGLVGDSSLCNALMNLYAKGENLSSAECVFTHMEHRDIVSWNTIMTKC 264
Query: 224 SFNGLDQEALETFRRILTVGLKPNVSTFSSVIPVCTRLGHFCFGKSLHGFTIKSGYLFDD 283
NG +++L+ F+ + G + + TFS VI C+ + G+SLHG IKSGY +
Sbjct: 265 LANGHPRKSLQYFKSMTGSGQEADTVTFSCVISACSSIEELTLGESLHGLVIKSGYSPEA 324
Query: 284 FLV--PALISMYAGDLDLSTARKLFDSLLEKNASVWNAMISAYTQSKKFFEAFEIFRQMI 341
+ ++ISMY+ D A +F+ L+ ++ NA+++ + + F EAF I QM
Sbjct: 325 HVSVGNSIISMYSKCGDTEAAETVFEELVCRDVISSNAILNGFAANGMFEEAFGILNQMQ 384
Query: 342 RAE-MQPDLVTFVSIIPSCENYCSFQCGESLTACVIKNGLGNQP-SVLTALLSMYAKLGN 399
+ +QPD+ T VSI C + + G ++ ++ + ++ V+ +++ MY K G
Sbjct: 385 SVDKIQPDIATVVSITSICGDLSFSREGRAVHGYTVRMEMQSRALEVINSVIDMYGKCGL 444
Query: 400 IDSAKFLFDQIPNRNLLCWNAMMSAYVRNRFWDASLAVFRQM--QFAGLNPDAVSIISVL 457
A+ LF +R+L+ WN+M+SA+ +N F + +F+++ +++ +++++L
Sbjct: 445 TTQAELLFKTTTHRDLVSWNSMISAFSQNGFTHKAKNLFKEVVSEYSCSKFSLSTVLAIL 504
Query: 458 SGCSKLDDVLLGKSAHAFSLRKGIVSNLDVLNALLMFYSDGGQFSYAFTLFHRMS-TRSS 516
+ C D ++ GKS H + + G N+ N+++ Y + AF MS TR
Sbjct: 505 TSCDSSDSLIFGKSVHCWLQKLGFGDNMLSANSVINMYIGCRDLTSAFLRLETMSETRDL 564
Query: 517 VSWNTLISRCVQNGAVEEAVILLQRMQKEG-VELDMVTLISFLPNLNKNGNIKQGMVIHG 575
SWN++IS C +G E++ Q M +EG + D++TL+ + G + QG HG
Sbjct: 565 TSWNSVISGCASSGHHLESLRAFQAMSREGKIRHDLITLLGTISASGNLGLVLQGRCFHG 624
Query: 576 YAIKTGCVADVTFLNALITMYCNCGSTNDGRLCLLLFQMGDKREISLWNAIISVYVQTNK 635
AIK+ D N LITMY C D + +F + + WN +IS Q
Sbjct: 625 LAIKSLRELDTQLQNTLITMYGRC---KDIESAVKVFGLISDPNLCSWNCVISALSQNKA 681
Query: 636 AKQAVAFFTELLGAGLEPDNVTVLSIISAGVLINSLNLTHSLMAFVIRKGLDKHVAVSNA 695
++ F L LEP+ +T + ++SA + S + +IR+G + VS A
Sbjct: 682 GREVFQLFRNL---KLEPNEITFVGLLSASTQLGSTSYGMQAHCHLIRRGFQANPFVSAA 738
Query: 696 LMDSYVRCGNISMARKLFGSLIYKDAFSWSVMINGYGLYGDGEAALELFKQMQL-SGVRP 754
L+D Y CG + K+F + +W+ +I+ +G +G GE A+ELFK++ S + P
Sbjct: 739 LVDMYSSCGMLETGMKVFRNSGVNSISAWNSVISAHGFHGMGEKAMELFKELSSNSEMEP 798
Query: 755 NEITYLGVLSACSHAGLVEQSKMVFKSMVEH-GISQKMEHYACMVDLLGRTGHLNEAFIF 813
N+ +++ +LSACSH+G +++ +K M E G+ EH +VD+LGR G L EA+ F
Sbjct: 799 NKSSFISLLSACSHSGFIDEGLSYYKQMEEKFGVKPVTEHRVWIVDMLGRAGKLREAYEF 858
Query: 814 VKKLPCKPSVSILESLLGACRIHGNVELGEIISGMLFEMDPENPGSYVMLHNIYASAGRW 873
+ + + +LL AC HG+ +LG+ ++ +LFEM+P+N Y+ L N Y G W
Sbjct: 859 ITGIGEPQKAGVWGALLSACNYHGDTKLGKEVAEVLFEMEPDNASYYISLANTYVGLGGW 918
Query: 874 EDAYRVRSCMKRSRLKKVPGFSLV 897
E+A R+R ++ + LKK+PG+S++
Sbjct: 919 EEAVRLRKMVEDNALKKLPGYSVI 942
Score = 234 bits (596), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 181/717 (25%), Positives = 346/717 (48%), Gaps = 21/717 (2%)
Query: 167 REIHCVIFRTGYHQNLVIQTALVDFYAKKGEMLTARLLFDQIPLADLVSCNTLMAGYSFN 226
R +HC + G Q+L + L+ FY + GE++++ LFD++ D++ N+++ + N
Sbjct: 107 RSVHCFALKCGLLQDLATSSKLLTFYGRTGELVSSSCLFDELKEKDVIVWNSMITALNQN 166
Query: 227 GLDQEALETFRRILTVGLKPNVSTFSSVIPVCTRLGHFCFGKSLHGFTIKSGYLFDDFLV 286
G A+ F ++ G + + +T + L LH I++G + D L
Sbjct: 167 GRYIAAVGLFIEMIHKGNEFDSTTLLLAASALSSLHLSRKCSMLHCLAIETGLVGDSSLC 226
Query: 287 PALISMYAGDLDLSTARKLFDSLLEKNASVWNAMISAYTQSKKFFEAFEIFRQMIRAEMQ 346
AL+++YA +LS+A +F + ++ WN +++ + ++ + F+ M + +
Sbjct: 227 NALMNLYAKGENLSSAECVFTHMEHRDIVSWNTIMTKCLANGHPRKSLQYFKSMTGSGQE 286
Query: 347 PDLVTFVSIIPSCENYCSFQCGESLTACVIKNGLGNQP--SVLTALLSMYAKLGNIDSAK 404
D VTF +I +C + GESL VIK+G + SV +++SMY+K G+ ++A+
Sbjct: 287 ADTVTFSCVISACSSIEELTLGESLHGLVIKSGYSPEAHVSVGNSIISMYSKCGDTEAAE 346
Query: 405 FLFDQIPNRNLLCWNAMMSAYVRNRFWDASLAVFRQMQFAG-LNPDAVSIISVLSGCSKL 463
+F+++ R+++ NA+++ + N ++ + + QMQ + PD +++S+ S C L
Sbjct: 347 TVFEELVCRDVISSNAILNGFAANGMFEEAFGILNQMQSVDKIQPDIATVVSITSICGDL 406
Query: 464 DDVLLGKSAHAFSLRKGIVSN-LDVLNALLMFYSDGGQFSYAFTLFHRMSTRSSVSWNTL 522
G++ H +++R + S L+V+N+++ Y G + A LF + R VSWN++
Sbjct: 407 SFSREGRAVHGYTVRMEMQSRALEVINSVIDMYGKCGLTTQAELLFKTTTHRDLVSWNSM 466
Query: 523 ISRCVQNGAVEEAVILLQRMQKE--GVELDMVTLISFLPNLNKNGNIKQGMVIHGYAIKT 580
IS QNG +A L + + E + + T+++ L + + + ++ G +H + K
Sbjct: 467 ISAFSQNGFTHKAKNLFKEVVSEYSCSKFSLSTVLAILTSCDSSDSLIFGKSVHCWLQKL 526
Query: 581 GCVADVTFLNALITMYCNCGSTNDGRLCLLLFQMGDKREISLWNAIISVYVQTNKAKQAV 640
G ++ N++I MY C L L M + R+++ WN++IS + +++
Sbjct: 527 GFGDNMLSANSVINMYIGCRDLTSA--FLRLETMSETRDLTSWNSVISGCASSGHHLESL 584
Query: 641 AFFTELLGAG-LEPDNVTVLSIISAGVLINSLNLTHSLMAFVIRKGLDKHVAVSNALMDS 699
F + G + D +T+L ISA + + I+ + + N L+
Sbjct: 585 RAFQAMSREGKIRHDLITLLGTISASGNLGLVLQGRCFHGLAIKSLRELDTQLQNTLITM 644
Query: 700 YVRCGNISMARKLFGSLIYKDAFSWSVMINGYGLYGDGEAALELFKQMQLSGVRPNEITY 759
Y RC +I A K+FG + + SW+ +I+ G +LF+ ++L PNEIT+
Sbjct: 645 YGRCKDIESAVKVFGLISDPNLCSWNCVISALSQNKAGREVFQLFRNLKL---EPNEITF 701
Query: 760 LGVLSACSHAGLVEQSKMVFKSMVEHGISQKMEHYACMVDLLGRTGHLNEAFIFVKKLPC 819
+G+LSA + G ++ G A +VD+ G L E + V +
Sbjct: 702 VGLLSASTQLGSTSYGMQAHCHLIRRGFQANPFVSAALVDMYSSCGML-ETGMKVFRNSG 760
Query: 820 KPSVSILESLLGACRIHGNVE-----LGEIISGMLFEMDPENPGSYVMLHNIYASAG 871
S+S S++ A HG E E+ S EM+P N S++ L + + +G
Sbjct: 761 VNSISAWNSVISAHGFHGMGEKAMELFKELSSNS--EMEP-NKSSFISLLSACSHSG 814
>sp|Q9SS60|PP210_ARATH Pentatricopeptide repeat-containing protein At3g03580
OS=Arabidopsis thaliana GN=PCMP-H23 PE=2 SV=1
Length = 882
Score = 383 bits (983), Expect = e-105, Method: Compositional matrix adjust.
Identities = 222/749 (29%), Positives = 395/749 (52%), Gaps = 6/749 (0%)
Query: 151 PFLIKACSSLSDLRIGREIHCVIFRTGYHQNLVIQTALVDFYAKKGEMLTARLLFDQI-P 209
PF+ +A SS S+L R IH ++ G + L+D Y+ E ++ +F ++ P
Sbjct: 8 PFISRALSSSSNLNELRRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRVSP 67
Query: 210 LADLVSCNTLMAGYSFNGLDQEALETFRRILTVGLKPNVSTFSSVIPVCTRLGHFCFGKS 269
++ N+++ +S NGL EALE + ++ + P+ TF SVI C L G
Sbjct: 68 AKNVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDL 127
Query: 270 LHGFTIKSGYLFDDFLVPALISMYAGDLDLSTARKLFDSLLEKNASVWNAMISAYTQSKK 329
++ + G+ D F+ AL+ MY+ L+ AR++FD + ++ WN++IS Y+
Sbjct: 128 VYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGY 187
Query: 330 FFEAFEIFRQMIRAEMQPDLVTFVSIIPSCENYCSFQCGESLTACVIKNGLGNQPSVLTA 389
+ EA EI+ ++ + + PD T S++P+ N + G+ L +K+G+ + V
Sbjct: 188 YEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNG 247
Query: 390 LLSMYAKLGNIDSAKFLFDQIPNRNLLCWNAMMSAYVRNRFWDASLAVFRQMQFAGLNPD 449
L++MY K A+ +FD++ R+ + +N M+ Y++ + S+ +F + PD
Sbjct: 248 LVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLE-NLDQFKPD 306
Query: 450 AVSIISVLSGCSKLDDVLLGKSAHAFSLRKGIVSNLDVLNALLMFYSDGGQFSYAFTLFH 509
+++ SVL C L D+ L K + + L+ G V V N L+ Y+ G A +F+
Sbjct: 307 LLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFN 366
Query: 510 RMSTRSSVSWNTLISRCVQNGAVEEAVILLQRMQKEGVELDMVTLISFLPNLNKNGNIKQ 569
M + +VSWN++IS +Q+G + EA+ L + M + D +T + + + ++K
Sbjct: 367 SMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKF 426
Query: 570 GMVIHGYAIKTGCVADVTFLNALITMYCNCGSTNDGRLCLLLFQMGDKREISLWNAIISV 629
G +H IK+G D++ NALI MY CG D L +F + WN +IS
Sbjct: 427 GKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDS---LKIFSSMGTGDTVTWNTVISA 483
Query: 630 YVQTNKAKQAVAFFTELLGAGLEPDNVTVLSIISAGVLINSLNLTHSLMAFVIRKGLDKH 689
V+ + T++ + + PD T L + + + L + ++R G +
Sbjct: 484 CVRFGDFATGLQVTTQMRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESE 543
Query: 690 VAVSNALMDSYVRCGNISMARKLFGSLIYKDAFSWSVMINGYGLYGDGEAALELFKQMQL 749
+ + NAL++ Y +CG + + ++F + +D +W+ MI YG+YG+GE ALE F M+
Sbjct: 544 LQIGNALIEMYSKCGCLENSSRVFERMSRRDVVTWTGMIYAYGMYGEGEKALETFADMEK 603
Query: 750 SGVRPNEITYLGVLSACSHAGLVEQSKMVFKSMVEH-GISQKMEHYACMVDLLGRTGHLN 808
SG+ P+ + ++ ++ ACSH+GLV++ F+ M H I +EHYAC+VDLL R+ ++
Sbjct: 604 SGIVPDSVVFIAIIYACSHSGLVDEGLACFEKMKTHYKIDPMIEHYACVVDLLSRSQKIS 663
Query: 809 EAFIFVKKLPCKPSVSILESLLGACRIHGNVELGEIISGMLFEMDPENPGSYVMLHNIYA 868
+A F++ +P KP SI S+L ACR G++E E +S + E++P++PG ++ N YA
Sbjct: 664 KAEEFIQAMPIKPDASIWASVLRACRTSGDMETAERVSRRIIELNPDDPGYSILASNAYA 723
Query: 869 SAGRWEDAYRVRSCMKRSRLKKVPGFSLV 897
+ +W+ +R +K + K PG+S +
Sbjct: 724 ALRKWDKVSLIRKSLKDKHITKNPGYSWI 752
Score = 287 bits (734), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 192/686 (27%), Positives = 356/686 (51%), Gaps = 19/686 (2%)
Query: 112 VFLQNLMIRGLSNCGLHADLLHVYIKCRLSGCPSDDFTFPFLIKACSSLSDLRIGREIHC 171
V+L N +IR S GL + L Y K R S D +TFP +IKAC+ L D +G ++
Sbjct: 71 VYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVYE 130
Query: 172 VIFRTGYHQNLVIQTALVDFYAKKGEMLTARLLFDQIPLADLVSCNTLMAGYSFNGLDQE 231
I G+ +L + ALVD Y++ G + AR +FD++P+ DLVS N+L++GYS +G +E
Sbjct: 131 QILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEE 190
Query: 232 ALETFRRILTVGLKPNVSTFSSVIPVCTRLGHFCFGKSLHGFTIKSGYLFDDFLVPALIS 291
ALE + + + P+ T SSV+P L G+ LHGF +KSG + L++
Sbjct: 191 ALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNGLVA 250
Query: 292 MYAGDLDLSTARKLFDSLLEKNASVWNAMISAYTQSKKFFEAFEIFRQMIRAEMQPDLVT 351
MY + AR++FD + +++ +N MI Y + + E+ +F + + + +PDL+T
Sbjct: 251 MYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLENL-DQFKPDLLT 309
Query: 352 FVSIIPSCENYCSFQCGESLTACVIKNGLGNQPSVLTALLSMYAKLGNIDSAKFLFDQIP 411
S++ +C + + + ++K G + +V L+ +YAK G++ +A+ +F+ +
Sbjct: 310 VSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSME 369
Query: 412 NRNLLCWNAMMSAYVRNRFWDASLAVFRQMQFAGLNPDAVSIISVLSGCSKLDDVLLGKS 471
++ + WN+++S Y+++ ++ +F+ M D ++ + ++S ++L D+ GK
Sbjct: 370 CKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFGKG 429
Query: 472 AHAFSLRKGIVSNLDVLNALLMFYSDGGQFSYAFTLFHRMSTRSSVSWNTLISRCVQNGA 531
H+ ++ GI +L V NAL+ Y+ G+ + +F M T +V+WNT+IS CV+ G
Sbjct: 430 LHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVISACVRFGD 489
Query: 532 VEEAVILLQRMQKEGVELDMVTLISFLPNLNKNGNIKQGMVIHGYAIKTGCVADVTFLNA 591
+ + +M+K V DM T + LP + G IH ++ G +++ NA
Sbjct: 490 FATGLQVTTQMRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESELQIGNA 549
Query: 592 LITMYCNCGS-TNDGRLCLLLFQMGDKREISLWNAIISVYVQTNKAKQAVAFFTELLGAG 650
LI MY CG N R +F+ +R++ W +I Y + ++A+ F ++ +G
Sbjct: 550 LIEMYSKCGCLENSSR----VFERMSRRDVVTWTGMIYAYGMYGEGEKALETFADMEKSG 605
Query: 651 LEPDNVTVLSIISA----GVLINSLNLTHSLMAFVIRKGLDKHVAVSNALMDSYVRCGNI 706
+ PD+V ++II A G++ L + + +H A ++D R I
Sbjct: 606 IVPDSVVFIAIIYACSHSGLVDEGLACFEKMKTHYKIDPMIEHYA---CVVDLLSRSQKI 662
Query: 707 SMARKLFGSL-IYKDAFSWSVMINGYGLYGDGEAALELFKQMQLSGVRPNEITYLGVLSA 765
S A + ++ I DA W+ ++ GD E A + + ++ + P++ Y +L++
Sbjct: 663 SKAEEFIQAMPIKPDASIWASVLRACRTSGDMETAERVSR--RIIELNPDDPGY-SILAS 719
Query: 766 CSHAGLVEQSK--MVFKSMVEHGISQ 789
++A L + K ++ KS+ + I++
Sbjct: 720 NAYAALRKWDKVSLIRKSLKDKHITK 745
>sp|Q9FWA6|PP207_ARATH Pentatricopeptide repeat-containing protein At3g02330
OS=Arabidopsis thaliana GN=PCMP-E90 PE=2 SV=2
Length = 903
Score = 382 bits (982), Expect = e-105, Method: Compositional matrix adjust.
Identities = 227/799 (28%), Positives = 397/799 (49%), Gaps = 51/799 (6%)
Query: 149 TFPFLIKACSSLSDLRIGREIHCVIFRTGYH----------------------------- 179
F F+ K C+ L +G++ H + +G+
Sbjct: 50 NFSFVFKECAKQGALELGKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFDKM 109
Query: 180 --QNLVIQTALVDFYAKKGEMLTARLLFDQIPLADLVSCNTLMAGYSFNGLDQEALETFR 237
+++V +++ Y+K +M A F+ +P+ D+VS N++++GY NG +++E F
Sbjct: 110 PLRDVVSWNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFV 169
Query: 238 RILTVGLKPNVSTFSSVIPVCTRLGHFCFGKSLHGFTIKSGYLFDDFLVPALISMYAGDL 297
+ G++ + TF+ ++ VC+ L G +HG ++ G D AL+ MYA
Sbjct: 170 DMGREGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGK 229
Query: 298 DLSTARKLFDSLLEKNASVWNAMISAYTQSKKFFEAFEIFRQMIRAEMQPDLVTFVSIIP 357
+ ++F + EKN+ W+A+I+ Q+ A + F++M + + S++
Sbjct: 230 RFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLR 289
Query: 358 SCENYCSFQCGESLTACVIKNGLGNQPSVLTALLSMYAKLGNIDSAKFLFDQIPNRNLLC 417
SC + G L A +K+ V TA L MYAK N+ A+ LFD N N
Sbjct: 290 SCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQS 349
Query: 418 WNAMMSAYVRNRFWDASLAVFRQMQFAGLNPDAVSIISVLSGCSKLDDVLLGKSAHAFSL 477
+NAM++ Y + +L +F ++ +GL D +S+ V C+ + + G + ++
Sbjct: 350 YNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAI 409
Query: 478 RKGIVSNLDVLNALLMFYSDGGQFSYAFTLFHRMSTRSSVSWNTLISRCVQNGAVEEAVI 537
+ + ++ V NA + Y + AF +F M R +VSWN +I+ QNG E +
Sbjct: 410 KSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLF 469
Query: 538 LLQRMQKEGVELDMVTLISFLPNLNKNGNIKQGMVIHGYAIKTGCVADVTFLNALITMYC 597
L M + +E D T S L G++ GM IH +K+G ++ + +LI MY
Sbjct: 470 LFVSMLRSRIEPDEFTFGSILKACT-GGSLGYGMEIHSSIVKSGMASNSSVGCSLIDMYS 528
Query: 598 NCGSTNDG-RLCLLLFQ-------------MGDKREISL---WNAIISVYVQTNKAKQAV 640
CG + ++ FQ M +KR + WN+IIS YV +++ A
Sbjct: 529 KCGMIEEAEKIHSRFFQRANVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQ 588
Query: 641 AFFTELLGAGLEPDNVTVLSIISAGVLINSLNLTHSLMAFVIRKGLDKHVAVSNALMDSY 700
FT ++ G+ PD T +++ + S L + A VI+K L V + + L+D Y
Sbjct: 589 MLFTRMMEMGITPDKFTYATVLDTCANLASAGLGKQIHAQVIKKELQSDVYICSTLVDMY 648
Query: 701 VRCGNISMARKLFGSLIYKDAFSWSVMINGYGLYGDGEAALELFKQMQLSGVRPNEITYL 760
+CG++ +R +F + +D +W+ MI GY +G GE A++LF++M L ++PN +T++
Sbjct: 649 SKCGDLHDSRLMFEKSLRRDFVTWNAMICGYAHHGKGEEAIQLFERMILENIKPNHVTFI 708
Query: 761 GVLSACSHAGLVEQSKMVFKSMV-EHGISQKMEHYACMVDLLGRTGHLNEAFIFVKKLPC 819
+L AC+H GL+++ F M ++G+ ++ HY+ MVD+LG++G + A ++++P
Sbjct: 709 SILRACAHMGLIDKGLEYFYMMKRDYGLDPQLPHYSNMVDILGKSGKVKRALELIREMPF 768
Query: 820 KPSVSILESLLGACRIH-GNVELGEIISGMLFEMDPENPGSYVMLHNIYASAGRWEDAYR 878
+ I +LLG C IH NVE+ E + L +DP++ +Y +L N+YA AG WE
Sbjct: 769 EADDVIWRTLLGVCTIHRNNVEVAEEATAALLRLDPQDSSAYTLLSNVYADAGMWEKVSD 828
Query: 879 VRSCMKRSRLKKVPGFSLV 897
+R M+ +LKK PG S V
Sbjct: 829 LRRNMRGFKLKKEPGCSWV 847
Score = 233 bits (595), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 168/637 (26%), Positives = 294/637 (46%), Gaps = 30/637 (4%)
Query: 116 NLMIRGLSNCGLHADLLHVYIKCRLSGCPSDDFTFPFLIKACSSLSDLRIGREIHCVIFR 175
N M+ G G + V++ G D TF ++K CS L D +G +IH ++ R
Sbjct: 149 NSMLSGYLQNGESLKSIEVFVDMGREGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVR 208
Query: 176 TGYHQNLVIQTALVDFYAKKGEMLTARLLFDQIPLADLVSCNTLMAGYSFNGLDQEALET 235
G ++V +AL+D YAK + + +F IP + VS + ++AG N L AL+
Sbjct: 209 VGCDTDVVAASALLDMYAKGKRFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKF 268
Query: 236 FRRILTVGLKPNVSTFSSVIPVCTRLGHFCFGKSLHGFTIKSGYLFDDFLVPALISMYAG 295
F+ + V + S ++SV+ C L G LH +KS + D + A + MYA
Sbjct: 269 FKEMQKVNAGVSQSIYASVLRSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAK 328
Query: 296 DLDLSTARKLFDSLLEKNASVWNAMISAYTQSKKFFEAFEIFRQMIRAEMQPDLVTFVSI 355
++ A+ LFD+ N +NAMI+ Y+Q + F+A +F +++ + + D ++ +
Sbjct: 329 CDNMQDAQILFDNSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGV 388
Query: 356 IPSCENYCSFQCGESLTACVIKNGLGNQPSVLTALLSMYAKLGNIDSAKFLFDQIPNRNL 415
+C G + IK+ L V A + MY K + A +FD++ R+
Sbjct: 389 FRACALVKGLSEGLQIYGLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDA 448
Query: 416 LCWNAMMSAYVRNRFWDASLAVFRQMQFAGLNPDAVSIISVLSGCSKLDDVLLGKSAHAF 475
+ WNA+++A+ +N +L +F M + + PD + S+L C+ + G H+
Sbjct: 449 VSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSILKACTG-GSLGYGMEIHSS 507
Query: 476 SLRKGIVSNLDVLNALLMFYSDGGQFSYAFTLFHRMSTRSS------------------- 516
++ G+ SN V +L+ YS G A + R R++
Sbjct: 508 IVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRANVSGTMEELEKMHNKRLQEM 567
Query: 517 -VSWNTLISRCVQNGAVEEAVILLQRMQKEGVELDMVTLISFLPNLNKNGNIKQGMVIHG 575
VSWN++IS V E+A +L RM + G+ D T + L + G IH
Sbjct: 568 CVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYATVLDTCANLASAGLGKQIHA 627
Query: 576 YAIKTGCVADVTFLNALITMYCNCGSTNDGRLCLLLFQMGDKREISLWNAIISVYVQTNK 635
IK +DV + L+ MY CG +D R L+F+ +R+ WNA+I Y K
Sbjct: 628 QVIKKELQSDVYICSTLVDMYSKCGDLHDSR---LMFEKSLRRDFVTWNAMICGYAHHGK 684
Query: 636 AKQAVAFFTELLGAGLEPDNVTVLSIISAGVLINSLNLTHSLMAFVIRK---GLDKHVAV 692
++A+ F ++ ++P++VT +SI+ A + ++ L F + K GLD +
Sbjct: 685 GEEAIQLFERMILENIKPNHVTFISILRACAHMGLID--KGLEYFYMMKRDYGLDPQLPH 742
Query: 693 SNALMDSYVRCGNISMARKLFGSLIYK-DAFSWSVMI 728
+ ++D + G + A +L + ++ D W ++
Sbjct: 743 YSNMVDILGKSGKVKRALELIREMPFEADDVIWRTLL 779
Score = 202 bits (515), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 151/621 (24%), Positives = 263/621 (42%), Gaps = 55/621 (8%)
Query: 247 NVSTFSSVIPVCTRLGHFCFGKSLHGFTIKSGYLFDDFLVPALISMYAGDLDLSTARKLF 306
+ + FS V C + G GK H I SG+ F++ L+ +Y D +A +F
Sbjct: 47 STTNFSFVFKECAKQGALELGKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVF 106
Query: 307 DSLLEKNASVWNAMISAYTQSKKFFEA-------------------------------FE 335
D + ++ WN MI+ Y++S F+A E
Sbjct: 107 DKMPLRDVVSWNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIE 166
Query: 336 IFRQMIRAEMQPDLVTFVSIIPSCENYCSFQCGESLTACVIKNGLGNQPSVLTALLSMYA 395
+F M R ++ D TF I+ C G + V++ G +ALL MYA
Sbjct: 167 VFVDMGREGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYA 226
Query: 396 KLGNIDSAKFLFDQIPNRNLLCWNAMMSAYVRNRFWDASLAVFRQMQFAGLNPDAVSIIS 455
K + +F IP +N + W+A+++ V+N +L F++MQ S
Sbjct: 227 KGKRFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYAS 286
Query: 456 VLSGCSKLDDVLLGKSAHAFSLRKGIVSNLDVLNALLMFYSDGGQFSYAFTLFHRMSTRS 515
VL C+ L ++ LG HA +L+ ++ V A L Y+ A LF +
Sbjct: 287 VLRSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLN 346
Query: 516 SVSWNTLISRCVQNGAVEEAVILLQRMQKEGVELDMVTLISFLPNLNKNGNIKQGMVIHG 575
S+N +I+ Q +A++L R+ G+ D ++L + +G+ I+G
Sbjct: 347 RQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYG 406
Query: 576 YAIKTGCVADVTFLNALITMYCNCGSTNDGRLCLLLFQMGDKREISLWNAIISVYVQTNK 635
AIK+ DV NA I MY C + + +F +R+ WNAII+ + Q K
Sbjct: 407 LAIKSSLSLDVCVANAAIDMYGKCQALAEA---FRVFDEMRRRDAVSWNAIIAAHEQNGK 463
Query: 636 AKQAVAFFTELLGAGLEPDNVTVLSIISAGVLINSLNLTHSLMAFVIRKGLDKHVAVSNA 695
+ + F +L + +EPD T SI+ A SL + + +++ G+ + +V +
Sbjct: 464 GYETLFLFVSMLRSRIEPDEFTFGSILKA-CTGGSLGYGMEIHSSIVKSGMASNSSVGCS 522
Query: 696 LMDSYVRCGNISMARKLFGSLIYKD--------------------AFSWSVMINGYGLYG 735
L+D Y +CG I A K+ + SW+ +I+GY +
Sbjct: 523 LIDMYSKCGMIEEAEKIHSRFFQRANVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKE 582
Query: 736 DGEAALELFKQMQLSGVRPNEITYLGVLSACSHAGLVEQSKMVFKSMVEHGISQKMEHYA 795
E A LF +M G+ P++ TY VL C++ K + +++ + + +
Sbjct: 583 QSEDAQMLFTRMMEMGITPDKFTYATVLDTCANLASAGLGKQIHAQVIKKELQSDVYICS 642
Query: 796 CMVDLLGRTGHLNEAFIFVKK 816
+VD+ + G L+++ + +K
Sbjct: 643 TLVDMYSKCGDLHDSRLMFEK 663
Score = 182 bits (463), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 128/509 (25%), Positives = 228/509 (44%), Gaps = 35/509 (6%)
Query: 333 AFEIFRQMIRAEMQPDLVTFVSIIPSCENYCSFQCGESLTACVIKNGLGNQPSVLTALLS 392
+F F + F + C + + G+ A +I +G VL LL
Sbjct: 32 SFSYFTDFLNQVNSVSTTNFSFVFKECAKQGALELGKQAHAHMIISGFRPTTFVLNCLLQ 91
Query: 393 MYAKLGNIDSAKFLFDQIPNRNLLCWNAMMSAYVR-------NRF-----------WDA- 433
+Y + SA +FD++P R+++ WN M++ Y + N F W++
Sbjct: 92 VYTNSRDFVSASMVFDKMPLRDVVSWNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSM 151
Query: 434 ------------SLAVFRQMQFAGLNPDAVSIISVLSGCSKLDDVLLGKSAHAFSLRKGI 481
S+ VF M G+ D + +L CS L+D LG H +R G
Sbjct: 152 LSGYLQNGESLKSIEVFVDMGREGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGC 211
Query: 482 VSNLDVLNALLMFYSDGGQFSYAFTLFHRMSTRSSVSWNTLISRCVQNGAVEEAVILLQR 541
+++ +ALL Y+ G +F + +F + ++SVSW+ +I+ CVQN + A+ +
Sbjct: 212 DTDVVAASALLDMYAKGKRFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKE 271
Query: 542 MQKEGVELDMVTLISFLPNLNKNGNIKQGMVIHGYAIKTGCVADVTFLNALITMYCNCGS 601
MQK + S L + ++ G +H +A+K+ AD A + MY C +
Sbjct: 272 MQKVNAGVSQSIYASVLRSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDN 331
Query: 602 TNDGRLCLLLFQMGDKREISLWNAIISVYVQTNKAKQAVAFFTELLGAGLEPDNVTVLSI 661
D + +LF + +NA+I+ Y Q +A+ F L+ +GL D +++ +
Sbjct: 332 MQDAQ---ILFDNSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGV 388
Query: 662 ISAGVLINSLNLTHSLMAFVIRKGLDKHVAVSNALMDSYVRCGNISMARKLFGSLIYKDA 721
A L+ L+ + I+ L V V+NA +D Y +C ++ A ++F + +DA
Sbjct: 389 FRACALVKGLSEGLQIYGLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDA 448
Query: 722 FSWSVMINGYGLYGDGEAALELFKQMQLSGVRPNEITYLGVLSACSHAGLVEQSKMVFKS 781
SW+ +I + G G L LF M S + P+E T+ +L AC+ G + + S
Sbjct: 449 VSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSILKACT-GGSLGYGMEIHSS 507
Query: 782 MVEHGISQKMEHYACMVDLLGRTGHLNEA 810
+V+ G++ ++D+ + G + EA
Sbjct: 508 IVKSGMASNSSVGCSLIDMYSKCGMIEEA 536
>sp|Q9LFI1|PP280_ARATH Pentatricopeptide repeat-containing protein At3g53360,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E86 PE=2
SV=1
Length = 768
Score = 379 bits (972), Expect = e-104, Method: Compositional matrix adjust.
Identities = 219/672 (32%), Positives = 368/672 (54%), Gaps = 7/672 (1%)
Query: 230 QEALETFR-RILTVGLKPNVSTFSSVIPVCTRLGHFCFGKSLHGFTIKSGYLFDDFLVPA 288
+EALE F K + T+ S+I C+ G+ +H + S +D L
Sbjct: 48 REALEAFDFAQKNSSFKIRLRTYISLICACSSSRSLAQGRKIHDHILNSNCKYDTILNNH 107
Query: 289 LISMYAGDLDLSTARKLFDSLLEKNASVWNAMISAYTQSKKFFEAFEIFRQMIRAEMQPD 348
++SMY L AR++FD + E+N + ++I+ Y+Q+ + EA ++ +M++ ++ PD
Sbjct: 108 ILSMYGKCGSLRDAREVFDFMPERNLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDLVPD 167
Query: 349 LVTFVSIIPSCENYCSFQCGESLTACVIKNGLGNQPSVLTALLSMYAKLGNIDSAKFLFD 408
F SII +C + G+ L A VIK + AL++MY + + A +F
Sbjct: 168 QFAFGSIIKACASSSDVGLGKQLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASRVFY 227
Query: 409 QIPNRNLLCWNAMMSAYVRNRFWDASLAVFRQM-QFAGLNPDAVSIISVLSGCSKLDDVL 467
IP ++L+ W+++++ + + F +L+ ++M F +P+ S L CS L
Sbjct: 228 GIPMKDLISWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPD 287
Query: 468 LGKSAHAFSLRKGIVSNLDVLNALLMFYSDGGQFSYAFTLFHRMSTRSSVSWNTLISRCV 527
G H ++ + N +L Y+ G + A +F ++ + SWN +I+
Sbjct: 288 YGSQIHGLCIKSELAGNAIAGCSLCDMYARCGFLNSARRVFDQIERPDTASWNVIIAGLA 347
Query: 528 QNGAVEEAVILLQRMQKEGVELDMVTLISFLPNLNKNGNIKQGMVIHGYAIKTGCVADVT 587
NG +EAV + +M+ G D ++L S L K + QGM IH Y IK G +AD+T
Sbjct: 348 NNGYADEAVSVFSQMRSSGFIPDAISLRSLLCAQTKPMALSQGMQIHSYIIKWGFLADLT 407
Query: 588 FLNALITMYCNCGSTNDGRLCLLLFQMGDKREISL-WNAIISVYVQTNKAKQAVAFFTEL 646
N+L+TMY C +D C LF+ S+ WN I++ +Q + + + F +
Sbjct: 408 VCNSLLTMYTFC---SDLYCCFNLFEDFRNNADSVSWNTILTACLQHEQPVEMLRLFKLM 464
Query: 647 LGAGLEPDNVTVLSIISAGVLINSLNLTHSLMAFVIRKGLDKHVAVSNALMDSYVRCGNI 706
L + EPD++T+ +++ V I+SL L + + ++ GL + N L+D Y +CG++
Sbjct: 465 LVSECEPDHITMGNLLRGCVEISSLKLGSQVHCYSLKTGLAPEQFIKNGLIDMYAKCGSL 524
Query: 707 SMARKLFGSLIYKDAFSWSVMINGYGLYGDGEAALELFKQMQLSGVRPNEITYLGVLSAC 766
AR++F S+ +D SWS +I GY G GE AL LFK+M+ +G+ PN +T++GVL+AC
Sbjct: 525 GQARRIFDSMDNRDVVSWSTLIVGYAQSGFGEEALILFKEMKSAGIEPNHVTFVGVLTAC 584
Query: 767 SHAGLVEQSKMVFKSM-VEHGISQKMEHYACMVDLLGRTGHLNEAFIFVKKLPCKPSVSI 825
SH GLVE+ ++ +M EHGIS EH +C+VDLL R G LNEA F+ ++ +P V +
Sbjct: 585 SHVGLVEEGLKLYATMQTEHGISPTKEHCSCVVDLLARAGRLNEAERFIDEMKLEPDVVV 644
Query: 826 LESLLGACRIHGNVELGEIISGMLFEMDPENPGSYVMLHNIYASAGRWEDAYRVRSCMKR 885
++LL AC+ GNV L + + + ++DP N ++V+L +++AS+G WE+A +RS MK+
Sbjct: 645 WKTLLSACKTQGNVHLAQKAAENILKIDPFNSTAHVLLCSMHASSGNWENAALLRSSMKK 704
Query: 886 SRLKKVPGFSLV 897
+KK+PG S +
Sbjct: 705 HDVKKIPGQSWI 716
Score = 252 bits (644), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 195/735 (26%), Positives = 341/735 (46%), Gaps = 71/735 (9%)
Query: 149 TFPFLIKACSSLSDLRIGREIHCVIFRTGYHQNLVIQTALVDFYAKKGEMLTARLLFDQI 208
T+ LI ACSS L GR+IH I + + ++ ++ Y K G + AR +FD +
Sbjct: 69 TYISLICACSSSRSLAQGRKIHDHILNSNCKYDTILNNHILSMYGKCGSLRDAREVFDFM 128
Query: 209 PLADLVSCNTLMAGYSFNGLDQEALETFRRILTVGLKPNVSTFSSVIPVCTRLGHFCFGK 268
P +LVS +++ GYS NG EA+ + ++L L P+ F S+I C GK
Sbjct: 129 PERNLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDLVPDQFAFGSIIKACASSSDVGLGK 188
Query: 269 SLHGFTIK---SGYLFDDFLVPALISMYAGDLDLSTARKLFDSLLEKNASVWNAMISAYT 325
LH IK S +L ALI+MY +S A ++F + K+ W+++I+ ++
Sbjct: 189 QLHAQVIKLESSSHLIAQ---NALIAMYVRFNQMSDASRVFYGIPMKDLISWSSIIAGFS 245
Query: 326 QSKKFFEAFEIFRQMIR-AEMQPDLVTFVSIIPSCENYCSFQCGESLTACVIKNGLGNQP 384
Q FEA ++M+ P+ F S + +C + G + IK+ L
Sbjct: 246 QLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKSELAGNA 305
Query: 385 SVLTALLSMYAKLGNIDSAKFLFDQIPNRNLLCWNAMMSAYVRNRFWDASLAVFRQMQFA 444
+L MYA+ G ++SA+ +FDQI + WN +++ N + D +++VF QM+ +
Sbjct: 306 IAGCSLCDMYARCGFLNSARRVFDQIERPDTASWNVIIAGLANNGYADEAVSVFSQMRSS 365
Query: 445 GLNPDAVSIISVLSGCSKLDDVLLGKSAHAFSLRKGIVSNLDVLNALLMFYSDGGQFSYA 504
G PDA+S+ S+L +K + G H++ ++ G +++L V N+LL Y+
Sbjct: 366 GFIPDAISLRSLLCAQTKPMALSQGMQIHSYIIKWGFLADLTVCNSLLTMYTFCSDLYCC 425
Query: 505 FTLFHRMSTRS-SVSWNTLISRCVQNGAVEEAVILLQRMQKEGVELDMVTLISFLPNLNK 563
F LF + SVSWNT+++ C+Q+ E + L + M E D +T+ + L +
Sbjct: 426 FNLFEDFRNNADSVSWNTILTACLQHEQPVEMLRLFKLMLVSECEPDHITMGNLLRGCVE 485
Query: 564 NGNIKQGMVIHGYAIKTGCVADVTFLNALITMYCNCGSTNDGRLCLLLFQMGDKREISLW 623
++K G +H Y++KTG + N LI MY CGS R +F D R++ W
Sbjct: 486 ISSLKLGSQVHCYSLKTGLAPEQFIKNGLIDMYAKCGSLGQAR---RIFDSMDNRDVVSW 542
Query: 624 NAIISVYVQTNKAKQAVAFFTELLGAGLEPDNVTVLSIISA----GVLINSLNLTHSLMA 679
+ +I Y Q+ ++A+ F E+ AG+EP++VT + +++A G++ L L ++
Sbjct: 543 STLIVGYAQSGFGEEALILFKEMKSAGIEPNHVTFVGVLTACSHVGLVEEGLKLYATMQT 602
Query: 680 FVIRKGLDKHVAVSNALMDSYVRCGNISMARKLFGSL-IYKDAFSWSVMINGYGLYGD-- 736
G+ + ++D R G ++ A + + + D W +++ G+
Sbjct: 603 ---EHGISPTKEHCSCVVDLLARAGRLNEAERFIDEMKLEPDVVVWKTLLSACKTQGNVH 659
Query: 737 --GEAALELFKQMQLSGVRP-NEITYLGVLSACSHAGLVEQSKMVFKSMVEHGISQKMEH 793
+AA + K + P N ++ + S + +G E + ++ SM +H
Sbjct: 660 LAQKAAENILK------IDPFNSTAHVLLCSMHASSGNWENAALLRSSMKKHD------- 706
Query: 794 YACMVDLLGRTGHLNEAFIFVKKLPCKPSVSILESLLGACRIHGNVELGEIISGMLFEMD 853
VKK+P + + I + +IH + E I
Sbjct: 707 --------------------VKKIPGQSWIEIED------KIH--IFFAEDI------FH 732
Query: 854 PENPGSYVMLHNIYA 868
PE Y +LHNI++
Sbjct: 733 PERDDIYTVLHNIWS 747
Score = 214 bits (544), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 137/515 (26%), Positives = 257/515 (49%), Gaps = 5/515 (0%)
Query: 118 MIRGLSNCGLHADLLHVYIKCRLSGCPSDDFTFPFLIKACSSLSDLRIGREIHCVIFRTG 177
+I G S G A+ + +Y+K D F F +IKAC+S SD+ +G+++H + +
Sbjct: 139 VITGYSQNGQGAEAIRLYLKMLQEDLVPDQFAFGSIIKACASSSDVGLGKQLHAQVIKLE 198
Query: 178 YHQNLVIQTALVDFYAKKGEMLTARLLFDQIPLADLVSCNTLMAGYSFNGLDQEALETFR 237
+L+ Q AL+ Y + +M A +F IP+ DL+S ++++AG+S G + EAL +
Sbjct: 199 SSSHLIAQNALIAMYVRFNQMSDASRVFYGIPMKDLISWSSIIAGFSQLGFEFEALSHLK 258
Query: 238 RILTVGL-KPNVSTFSSVIPVCTRLGHFCFGKSLHGFTIKSGYLFDDFLVPALISMYAGD 296
+L+ G+ PN F S + C+ L +G +HG IKS + +L MYA
Sbjct: 259 EMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKSELAGNAIAGCSLCDMYARC 318
Query: 297 LDLSTARKLFDSLLEKNASVWNAMISAYTQSKKFFEAFEIFRQMIRAEMQPDLVTFVSII 356
L++AR++FD + + + WN +I+ + EA +F QM + PD ++ S++
Sbjct: 319 GFLNSARRVFDQIERPDTASWNVIIAGLANNGYADEAVSVFSQMRSSGFIPDAISLRSLL 378
Query: 357 PSCENYCSFQCGESLTACVIKNGLGNQPSVLTALLSMYAKLGNIDSAKFLFDQIPNR-NL 415
+ + G + + +IK G +V +LL+MY ++ LF+ N +
Sbjct: 379 CAQTKPMALSQGMQIHSYIIKWGFLADLTVCNSLLTMYTFCSDLYCCFNLFEDFRNNADS 438
Query: 416 LCWNAMMSAYVRNRFWDASLAVFRQMQFAGLNPDAVSIISVLSGCSKLDDVLLGKSAHAF 475
+ WN +++A +++ L +F+ M + PD +++ ++L GC ++ + LG H +
Sbjct: 439 VSWNTILTACLQHEQPVEMLRLFKLMLVSECEPDHITMGNLLRGCVEISSLKLGSQVHCY 498
Query: 476 SLRKGIVSNLDVLNALLMFYSDGGQFSYAFTLFHRMSTRSSVSWNTLISRCVQNGAVEEA 535
SL+ G+ + N L+ Y+ G A +F M R VSW+TLI Q+G EEA
Sbjct: 499 SLKTGLAPEQFIKNGLIDMYAKCGSLGQARRIFDSMDNRDVVSWSTLIVGYAQSGFGEEA 558
Query: 536 VILLQRMQKEGVELDMVTLISFLPNLNKNGNIKQGMVIHG-YAIKTGCVADVTFLNALIT 594
+IL + M+ G+E + VT + L + G +++G+ ++ + G + ++
Sbjct: 559 LILFKEMKSAGIEPNHVTFVGVLTACSHVGLVEEGLKLYATMQTEHGISPTKEHCSCVVD 618
Query: 595 MYCNCGSTNDGRLCLLLFQMGDKREISLWNAIISV 629
+ G N+ + +M + ++ +W ++S
Sbjct: 619 LLARAGRLNEAE--RFIDEMKLEPDVVVWKTLLSA 651
Score = 182 bits (463), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 111/393 (28%), Positives = 199/393 (50%), Gaps = 3/393 (0%)
Query: 146 DDFTFPFLIKACSSLSDLRIGREIHCVIFRTGYHQNLVIQTALVDFYAKKGEMLTARLLF 205
+++ F +KACSSL G +IH + ++ N + +L D YA+ G + +AR +F
Sbjct: 269 NEYIFGSSLKACSSLLRPDYGSQIHGLCIKSELAGNAIAGCSLCDMYARCGFLNSARRVF 328
Query: 206 DQIPLADLVSCNTLMAGYSFNGLDQEALETFRRILTVGLKPNVSTFSSVIPVCTRLGHFC 265
DQI D S N ++AG + NG EA+ F ++ + G P+ + S++ T+
Sbjct: 329 DQIERPDTASWNVIIAGLANNGYADEAVSVFSQMRSSGFIPDAISLRSLLCAQTKPMALS 388
Query: 266 FGKSLHGFTIKSGYLFDDFLVPALISMYAGDLDLSTARKLFDSLLEKNASV-WNAMISAY 324
G +H + IK G+L D + +L++MY DL LF+ SV WN +++A
Sbjct: 389 QGMQIHSYIIKWGFLADLTVCNSLLTMYTFCSDLYCCFNLFEDFRNNADSVSWNTILTAC 448
Query: 325 TQSKKFFEAFEIFRQMIRAEMQPDLVTFVSIIPSCENYCSFQCGESLTACVIKNGLGNQP 384
Q ++ E +F+ M+ +E +PD +T +++ C S + G + +K GL +
Sbjct: 449 LQHEQPVEMLRLFKLMLVSECEPDHITMGNLLRGCVEISSLKLGSQVHCYSLKTGLAPEQ 508
Query: 385 SVLTALLSMYAKLGNIDSAKFLFDQIPNRNLLCWNAMMSAYVRNRFWDASLAVFRQMQFA 444
+ L+ MYAK G++ A+ +FD + NR+++ W+ ++ Y ++ F + +L +F++M+ A
Sbjct: 509 FIKNGLIDMYAKCGSLGQARRIFDSMDNRDVVSWSTLIVGYAQSGFGEEALILFKEMKSA 568
Query: 445 GLNPDAVSIISVLSGCSKLDDVLLGKSAHA-FSLRKGIVSNLDVLNALLMFYSDGGQFSY 503
G+ P+ V+ + VL+ CS + V G +A GI + + ++ + G+ +
Sbjct: 569 GIEPNHVTFVGVLTACSHVGLVEEGLKLYATMQTEHGISPTKEHCSCVVDLLARAGRLNE 628
Query: 504 AFTLFHRMSTRSS-VSWNTLISRCVQNGAVEEA 535
A M V W TL+S C G V A
Sbjct: 629 AERFIDEMKLEPDVVVWKTLLSACKTQGNVHLA 661
Score = 120 bits (300), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 83/324 (25%), Positives = 160/324 (49%), Gaps = 3/324 (0%)
Query: 104 FPIIKKPCVFLQNLMIRGLSNCGLHADLLHVYIKCRLSGCPSDDFTFPFLIKACSSLSDL 163
F I++P N++I GL+N G + + V+ + R SG D + L+ A + L
Sbjct: 328 FDQIERPDTASWNVIIAGLANNGYADEAVSVFSQMRSSGFIPDAISLRSLLCAQTKPMAL 387
Query: 164 RIGREIHCVIFRTGYHQNLVIQTALVDFYAKKGEMLTARLLFDQI-PLADLVSCNTLMAG 222
G +IH I + G+ +L + +L+ Y ++ LF+ AD VS NT++
Sbjct: 388 SQGMQIHSYIIKWGFLADLTVCNSLLTMYTFCSDLYCCFNLFEDFRNNADSVSWNTILTA 447
Query: 223 YSFNGLDQEALETFRRILTVGLKPNVSTFSSVIPVCTRLGHFCFGKSLHGFTIKSGYLFD 282
+ E L F+ +L +P+ T +++ C + G +H +++K+G +
Sbjct: 448 CLQHEQPVEMLRLFKLMLVSECEPDHITMGNLLRGCVEISSLKLGSQVHCYSLKTGLAPE 507
Query: 283 DFLVPALISMYAGDLDLSTARKLFDSLLEKNASVWNAMISAYTQSKKFFEAFEIFRQMIR 342
F+ LI MYA L AR++FDS+ ++ W+ +I Y QS EA +F++M
Sbjct: 508 QFIKNGLIDMYAKCGSLGQARRIFDSMDNRDVVSWSTLIVGYAQSGFGEEALILFKEMKS 567
Query: 343 AEMQPDLVTFVSIIPSCENYCSFQCGESLTACV-IKNGLGNQPSVLTALLSMYAKLGNID 401
A ++P+ VTFV ++ +C + + G L A + ++G+ + ++ + A+ G ++
Sbjct: 568 AGIEPNHVTFVGVLTACSHVGLVEEGLKLYATMQTEHGISPTKEHCSCVVDLLARAGRLN 627
Query: 402 SAKFLFDQIP-NRNLLCWNAMMSA 424
A+ D++ +++ W ++SA
Sbjct: 628 EAERFIDEMKLEPDVVVWKTLLSA 651
>sp|Q9FLZ9|PP405_ARATH Pentatricopeptide repeat-containing protein At5g39350
OS=Arabidopsis thaliana GN=PCMP-E16 PE=2 SV=1
Length = 677
Score = 377 bits (969), Expect = e-103, Method: Compositional matrix adjust.
Identities = 213/667 (31%), Positives = 357/667 (53%), Gaps = 17/667 (2%)
Query: 244 LKPNVSTFSSVIPVCTRLGHFCFG------KSLHGFTIKSGYLFDDFLVPALISMYAGDL 297
L+ + SSV + L HF K+LH I G + ++ L YA
Sbjct: 5 LRRANNALSSVKQYQSLLNHFAATQSISKTKALHCHVITGGRV-SGHILSTLSVTYALCG 63
Query: 298 DLSTARKLFDSLLEKNASVWNAMISAYTQSKKFFEAFEIFRQMIRAEMQ--PDLVTFVSI 355
++ ARKLF+ + + + +N +I Y + + +A +F +M+ ++ PD T+ +
Sbjct: 64 HITYARKLFEEMPQSSLLSYNIVIRMYVREGLYHDAISVFIRMVSEGVKCVPDGYTYPFV 123
Query: 356 IPSCENYCSFQCGESLTACVIKNGLGNQPSVLTALLSMYAKLGNIDSAKFLFDQIPNRNL 415
+ S + G + ++++ G V ALL+MY G ++ A+ +FD + NR++
Sbjct: 124 AKAAGELKSMKLGLVVHGRILRSWFGRDKYVQNALLAMYMNFGKVEMARDVFDVMKNRDV 183
Query: 416 LCWNAMMSAYVRNRFWDASLAVFRQMQFAGLNPDAVSIISVLSGCSKLDDVLLGKSAHAF 475
+ WN M+S Y RN + + +L +F M ++ D +I+S+L C L D+ +G++ H
Sbjct: 184 ISWNTMISGYYRNGYMNDALMMFDWMVNESVDLDHATIVSMLPVCGHLKDLEMGRNVHKL 243
Query: 476 SLRKGIVSNLDVLNALLMFYSDGGQFSYAFTLFHRMSTRSSVSWNTLISRCVQNGAVEEA 535
K + ++V NAL+ Y G+ A +F RM R ++W +I+ ++G VE A
Sbjct: 244 VEEKRLGDKIEVKNALVNMYLKCGRMDEARFVFDRMERRDVITWTCMINGYTEDGDVENA 303
Query: 536 VILLQRMQKEGVELDMVTLISFLPNLNKNGNIKQGMVIHGYAIKTGCVADVTFLNALITM 595
+ L + MQ EGV + VT+ S + + G +HG+A++ +D+ +LI+M
Sbjct: 304 LELCRLMQFEGVRPNAVTIASLVSVCGDALKVNDGKCLHGWAVRQQVYSDIIIETSLISM 363
Query: 596 YCNCGSTNDGRLCLLLFQMGDKREISLWNAIISVYVQTNKAKQAVAFFTELLGAGLEPDN 655
Y C + LC +F K W+AII+ VQ A+ F + +EP+
Sbjct: 364 YAKCKRVD---LCFRVFSGASKYHTGPWSAIIAGCVQNELVSDALGLFKRMRREDVEPNI 420
Query: 656 VTVLSIISAGVLINSLNLTHSLMAFVIRKGLDKHVAVSNALMDSYVRCGNISMARKLFGS 715
T+ S++ A + L ++ ++ + G + + L+ Y +CG + A K+F
Sbjct: 421 ATLNSLLPAYAALADLRQAMNIHCYLTKTGFMSSLDAATGLVHVYSKCGTLESAHKIFNG 480
Query: 716 LIYK----DAFSWSVMINGYGLYGDGEAALELFKQMQLSGVRPNEITYLGVLSACSHAGL 771
+ K D W +I+GYG++GDG AL++F +M SGV PNEIT+ L+ACSH+GL
Sbjct: 481 IQEKHKSKDVVLWGALISGYGMHGDGHNALQVFMEMVRSGVTPNEITFTSALNACSHSGL 540
Query: 772 VEQSKMVFKSMVEHGIS-QKMEHYACMVDLLGRTGHLNEAFIFVKKLPCKPSVSILESLL 830
VE+ +F+ M+EH + + HY C+VDLLGR G L+EA+ + +P +P+ ++ +LL
Sbjct: 541 VEEGLTLFRFMLEHYKTLARSNHYTCIVDLLGRAGRLDEAYNLITTIPFEPTSTVWGALL 600
Query: 831 GACRIHGNVELGEIISGMLFEMDPENPGSYVMLHNIYASAGRWEDAYRVRSCMKRSRLKK 890
AC H NV+LGE+ + LFE++PEN G+YV+L NIYA+ GRW+D +VRS M+ L+K
Sbjct: 601 AACVTHENVQLGEMAANKLFELEPENTGNYVLLANIYAALGRWKDMEKVRSMMENVGLRK 660
Query: 891 VPGFSLV 897
PG S +
Sbjct: 661 KPGHSTI 667
Score = 253 bits (646), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 147/501 (29%), Positives = 263/501 (52%), Gaps = 4/501 (0%)
Query: 167 REIHCVIFRTGYHQNLVIQTALVDFYAKKGEMLTARLLFDQIPLADLVSCNTLMAGYSFN 226
+ +HC + G ++ T V YA G + AR LF+++P + L+S N ++ Y
Sbjct: 35 KALHCHVITGGRVSGHILSTLSVT-YALCGHITYARKLFEEMPQSSLLSYNIVIRMYVRE 93
Query: 227 GLDQEALETFRRILTVGLK--PNVSTFSSVIPVCTRLGHFCFGKSLHGFTIKSGYLFDDF 284
GL +A+ F R+++ G+K P+ T+ V L G +HG ++S + D +
Sbjct: 94 GLYHDAISVFIRMVSEGVKCVPDGYTYPFVAKAAGELKSMKLGLVVHGRILRSWFGRDKY 153
Query: 285 LVPALISMYAGDLDLSTARKLFDSLLEKNASVWNAMISAYTQSKKFFEAFEIFRQMIRAE 344
+ AL++MY + AR +FD + ++ WN MIS Y ++ +A +F M+
Sbjct: 154 VQNALLAMYMNFGKVEMARDVFDVMKNRDVISWNTMISGYYRNGYMNDALMMFDWMVNES 213
Query: 345 MQPDLVTFVSIIPSCENYCSFQCGESLTACVIKNGLGNQPSVLTALLSMYAKLGNIDSAK 404
+ D T VS++P C + + G ++ V + LG++ V AL++MY K G +D A+
Sbjct: 214 VDLDHATIVSMLPVCGHLKDLEMGRNVHKLVEEKRLGDKIEVKNALVNMYLKCGRMDEAR 273
Query: 405 FLFDQIPNRNLLCWNAMMSAYVRNRFWDASLAVFRQMQFAGLNPDAVSIISVLSGCSKLD 464
F+FD++ R+++ W M++ Y + + +L + R MQF G+ P+AV+I S++S C
Sbjct: 274 FVFDRMERRDVITWTCMINGYTEDGDVENALELCRLMQFEGVRPNAVTIASLVSVCGDAL 333
Query: 465 DVLLGKSAHAFSLRKGIVSNLDVLNALLMFYSDGGQFSYAFTLFHRMSTRSSVSWNTLIS 524
V GK H +++R+ + S++ + +L+ Y+ + F +F S + W+ +I+
Sbjct: 334 KVNDGKCLHGWAVRQQVYSDIIIETSLISMYAKCKRVDLCFRVFSGASKYHTGPWSAIIA 393
Query: 525 RCVQNGAVEEAVILLQRMQKEGVELDMVTLISFLPNLNKNGNIKQGMVIHGYAIKTGCVA 584
CVQN V +A+ L +RM++E VE ++ TL S LP +++Q M IH Y KTG ++
Sbjct: 394 GCVQNELVSDALGLFKRMRREDVEPNIATLNSLLPAYAALADLRQAMNIHCYLTKTGFMS 453
Query: 585 DVTFLNALITMYCNCGSTNDGRLCLLLFQMGDK-REISLWNAIISVYVQTNKAKQAVAFF 643
+ L+ +Y CG+ Q K +++ LW A+IS Y A+ F
Sbjct: 454 SLDAATGLVHVYSKCGTLESAHKIFNGIQEKHKSKDVVLWGALISGYGMHGDGHNALQVF 513
Query: 644 TELLGAGLEPDNVTVLSIISA 664
E++ +G+ P+ +T S ++A
Sbjct: 514 MEMVRSGVTPNEITFTSALNA 534
Score = 192 bits (489), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 124/477 (25%), Positives = 236/477 (49%), Gaps = 8/477 (1%)
Query: 104 FPIIKKPCVFLQNLMIRGLSNCGLHADLLHVYIKCRLSG--CPSDDFTFPFLIKACSSLS 161
F + + + N++IR GL+ D + V+I+ G C D +T+PF+ KA L
Sbjct: 72 FEEMPQSSLLSYNIVIRMYVREGLYHDAISVFIRMVSEGVKCVPDGYTYPFVAKAAGELK 131
Query: 162 DLRIGREIHCVIFRTGYHQNLVIQTALVDFYAKKGEMLTARLLFDQIPLADLVSCNTLMA 221
+++G +H I R+ + ++ +Q AL+ Y G++ AR +FD + D++S NT+++
Sbjct: 132 SMKLGLVVHGRILRSWFGRDKYVQNALLAMYMNFGKVEMARDVFDVMKNRDVISWNTMIS 191
Query: 222 GYSFNGLDQEALETFRRILTVGLKPNVSTFSSVIPVCTRLGHFCFGKSLHGFTIKSGYLF 281
GY NG +AL F ++ + + +T S++PVC L G+++H ++ L
Sbjct: 192 GYYRNGYMNDALMMFDWMVNESVDLDHATIVSMLPVCGHLKDLEMGRNVHKL-VEEKRLG 250
Query: 282 DDFLVP-ALISMYAGDLDLSTARKLFDSLLEKNASVWNAMISAYTQSKKFFEAFEIFRQM 340
D V AL++MY + AR +FD + ++ W MI+ YT+ A E+ R M
Sbjct: 251 DKIEVKNALVNMYLKCGRMDEARFVFDRMERRDVITWTCMINGYTEDGDVENALELCRLM 310
Query: 341 IRAEMQPDLVTFVSIIPSCENYCSFQCGESLTACVIKNGLGNQPSVLTALLSMYAKLGNI 400
++P+ VT S++ C + G+ L ++ + + + T+L+SMYAK +
Sbjct: 311 QFEGVRPNAVTIASLVSVCGDALKVNDGKCLHGWAVRQQVYSDIIIETSLISMYAKCKRV 370
Query: 401 DSAKFLFDQIPNRNLLCWNAMMSAYVRNRFWDASLAVFRQMQFAGLNPDAVSIISVLSGC 460
D +F + W+A+++ V+N +L +F++M+ + P+ ++ S+L
Sbjct: 371 DLCFRVFSGASKYHTGPWSAIIAGCVQNELVSDALGLFKRMRREDVEPNIATLNSLLPAY 430
Query: 461 SKLDDVLLGKSAHAFSLRKGIVSNLDVLNALLMFYSDGGQFSYAFTLFH----RMSTRSS 516
+ L D+ + H + + G +S+LD L+ YS G A +F+ + ++
Sbjct: 431 AALADLRQAMNIHCYLTKTGFMSSLDAATGLVHVYSKCGTLESAHKIFNGIQEKHKSKDV 490
Query: 517 VSWNTLISRCVQNGAVEEAVILLQRMQKEGVELDMVTLISFLPNLNKNGNIKQGMVI 573
V W LIS +G A+ + M + GV + +T S L + +G +++G+ +
Sbjct: 491 VLWGALISGYGMHGDGHNALQVFMEMVRSGVTPNEITFTSALNACSHSGLVEEGLTL 547
Score = 100 bits (248), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 77/332 (23%), Positives = 153/332 (46%), Gaps = 12/332 (3%)
Query: 104 FPIIKKPCVFLQNLMIRGLSNCGLHADLLHVYIKCRL---SGCPSDDFTFPFLIKACSSL 160
F +++ V MI G + G D+ + CRL G + T L+ C
Sbjct: 276 FDRMERRDVITWTCMINGYTEDG---DVENALELCRLMQFEGVRPNAVTIASLVSVCGDA 332
Query: 161 SDLRIGREIHCVIFRTGYHQNLVIQTALVDFYAKKGEMLTARLLFDQIPLADLVSCNTLM 220
+ G+ +H R + +++I+T+L+ YAK + +F + ++
Sbjct: 333 LKVNDGKCLHGWAVRQQVYSDIIIETSLISMYAKCKRVDLCFRVFSGASKYHTGPWSAII 392
Query: 221 AGYSFNGLDQEALETFRRILTVGLKPNVSTFSSVIPVCTRLGHFCFGKSLHGFTIKSGYL 280
AG N L +AL F+R+ ++PN++T +S++P L ++H + K+G++
Sbjct: 393 AGCVQNELVSDALGLFKRMRREDVEPNIATLNSLLPAYAALADLRQAMNIHCYLTKTGFM 452
Query: 281 FDDFLVPALISMYAGDLDLSTARKLFDSLLEKNAS----VWNAMISAYTQSKKFFEAFEI 336
L+ +Y+ L +A K+F+ + EK+ S +W A+IS Y A ++
Sbjct: 453 SSLDAATGLVHVYSKCGTLESAHKIFNGIQEKHKSKDVVLWGALISGYGMHGDGHNALQV 512
Query: 337 FRQMIRAEMQPDLVTFVSIIPSCENYCSFQCGESLTACVIKN-GLGNQPSVLTALLSMYA 395
F +M+R+ + P+ +TF S + +C + + G +L ++++ + + T ++ +
Sbjct: 513 FMEMVRSGVTPNEITFTSALNACSHSGLVEEGLTLFRFMLEHYKTLARSNHYTCIVDLLG 572
Query: 396 KLGNIDSAKFLFDQIP-NRNLLCWNAMMSAYV 426
+ G +D A L IP W A+++A V
Sbjct: 573 RAGRLDEAYNLITTIPFEPTSTVWGALLAACV 604
>sp|Q9LIE7|PP246_ARATH Pentatricopeptide repeat-containing protein At3g22150,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-E95 PE=2
SV=1
Length = 820
Score = 377 bits (967), Expect = e-103, Method: Compositional matrix adjust.
Identities = 241/722 (33%), Positives = 389/722 (53%), Gaps = 27/722 (3%)
Query: 194 KKGEMLTARLLFDQIPLADLVSCNTLMAGYSFNGLDQEALETFRRILTVGLKPNVS--TF 251
+ G AR LFD IP V NT++ G+ N L EAL + R+ N T+
Sbjct: 51 QDGNPQLARQLFDAIPKPTTVLWNTIIIGFICNNLPHEALLFYSRMKKTAPFTNCDAYTY 110
Query: 252 SSVIPVCTRLGHFCFGKSLHGFTIKSGYLFDDFLVPALISMYAGDL------DLSTARKL 305
SS + C + GK++H I+ + +L++MY L + RK+
Sbjct: 111 SSTLKACAETKNLKAGKAVHCHLIRCLQNSSRVVHNSLMNMYVSCLNAPDCFEYDVVRKV 170
Query: 306 FDSLLEKNASVWNAMISAYTQSKKFFEAFEIFRQMIRAEMQPDLVTFVSIIPSCENYCSF 365
FD++ KN WN +IS Y ++ + EA F M+R E++P V+FV++ P+ S
Sbjct: 171 FDNMRRKNVVAWNTLISWYVKTGRNAEACRQFGIMMRMEVKPSPVSFVNVFPAVSISRSI 230
Query: 366 QCGESLTACVIKNGLGNQPS----VLTALLSMYAKLGNIDSAKFLFDQIPNRNLLCWNAM 421
+ ++K LG++ V+++ +SMYA+LG+I+S++ +FD RN+ WN M
Sbjct: 231 KKANVFYGLMLK--LGDEYVKDLFVVSSAISMYAELGDIESSRRVFDSCVERNIEVWNTM 288
Query: 422 MSAYVRNRFWDASLAVFRQ-MQFAGLNPDAVSIISVLSGCSKLDDVLLGKSAHAFSLRKG 480
+ YV+N S+ +F + + + D V+ + S S L V LG+ H F +
Sbjct: 289 IGVYVQNDCLVESIELFLEAIGSKEIVSDEVTYLLAASAVSALQQVELGRQFHGFVSKNF 348
Query: 481 IVSNLDVLNALLMFYSDGGQFSYAFTLFHRMSTRSSVSWNTLISRCVQNGAVEEAVILLQ 540
+ ++N+L++ YS G +F +F M R VSWNT+IS VQNG +E ++L+
Sbjct: 349 RELPIVIVNSLMVMYSRCGSVHKSFGVFLSMRERDVVSWNTMISAFVQNGLDDEGLMLVY 408
Query: 541 RMQKEGVELDMVTLISFLPNLNKNGNIKQGMVIHGYAIKTGCVADVTFLNA-LITMYCNC 599
MQK+G ++D +T+ + L + N + G H + I+ G +N+ LI MY
Sbjct: 409 EMQKQGFKIDYITVTALLSAASNLRNKEIGKQTHAFLIRQGI--QFEGMNSYLIDMYSKS 466
Query: 600 GSTNDGRLCLLLFQMGD--KREISLWNAIISVYVQTNKAKQAVAFFTELLGAGLEPDNVT 657
G R+ LF+ +R+ + WN++IS Y Q ++ F ++L + P+ VT
Sbjct: 467 GLI---RISQKLFEGSGYAERDQATWNSMISGYTQNGHTEKTFLVFRKMLEQNIRPNAVT 523
Query: 658 VLSIISAGVLINSLNLTHSLMAFVIRKGLDKHVAVSNALMDSYVRCGNISMARKLFGSLI 717
V SI+ A I S++L L F IR+ LD++V V++AL+D Y + G I A +F
Sbjct: 524 VASILPACSQIGSVDLGKQLHGFSIRQYLDQNVFVASALVDMYSKAGAIKYAEDMFSQTK 583
Query: 718 YKDAFSWSVMINGYGLYGDGEAALELFKQMQLSGVRPNEITYLGVLSACSHAGLVEQSKM 777
+++ +++ MI GYG +G GE A+ LF MQ SG++P+ IT++ VLSACS++GL+++
Sbjct: 584 ERNSVTYTTMILGYGQHGMGERAISLFLSMQESGIKPDAITFVAVLSACSYSGLIDEGLK 643
Query: 778 VFKSMVE-HGISQKMEHYACMVDLLGRTGHLNEAFIFVKKLPCKPSVSIL-ESLLGACRI 835
+F+ M E + I EHY C+ D+LGR G +NEA+ FVK L + +++ L SLLG+C++
Sbjct: 644 IFEEMREVYNIQPSSEHYCCITDMLGRVGRVNEAYEFVKGLGEEGNIAELWGSLLGSCKL 703
Query: 836 HGNVELGEIISGMLFEMDPEN--PGSYVMLHNIYASAGRWEDAYRVRSCMKRSRLKKVPG 893
HG +EL E +S L + D G V+L N+YA +W+ +VR M+ LKK G
Sbjct: 704 HGELELAETVSERLAKFDKGKNFSGYEVLLSNMYAEEQKWKSVDKVRRGMREKGLKKEVG 763
Query: 894 FS 895
S
Sbjct: 764 RS 765
Score = 244 bits (624), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 161/597 (26%), Positives = 301/597 (50%), Gaps = 19/597 (3%)
Query: 82 PALALRTLEAFEITSYHIALSSFPIIKKPCVFLQNLMIRGL--SNCGLHADLLHVYIKCR 139
P++ R + + + +A F I KP L N +I G +N A L + +K
Sbjct: 40 PSIRSRLSKICQDGNPQLARQLFDAIPKPTTVLWNTIIIGFICNNLPHEALLFYSRMKKT 99
Query: 140 LSGCPSDDFTFPFLIKACSSLSDLRIGREIHCVIFRTGYHQNLVIQTALVDFYAK----- 194
D +T+ +KAC+ +L+ G+ +HC + R + + V+ +L++ Y
Sbjct: 100 APFTNCDAYTYSSTLKACAETKNLKAGKAVHCHLIRCLQNSSRVVHNSLMNMYVSCLNAP 159
Query: 195 -KGEMLTARLLFDQIPLADLVSCNTLMAGYSFNGLDQEALETFRRILTVGLKPNVSTFSS 253
E R +FD + ++V+ NTL++ Y G + EA F ++ + +KP+ +F +
Sbjct: 160 DCFEYDVVRKVFDNMRRKNVVAWNTLISWYVKTGRNAEACRQFGIMMRMEVKPSPVSFVN 219
Query: 254 VIPVCTRLGHFCFGKSLHGFTIKSG--YLFDDFLVPALISMYAGDLDLSTARKLFDSLLE 311
V P + +G +K G Y+ D F+V + ISMYA D+ ++R++FDS +E
Sbjct: 220 VFPAVSISRSIKKANVFYGLMLKLGDEYVKDLFVVSSAISMYAELGDIESSRRVFDSCVE 279
Query: 312 KNASVWNAMISAYTQSKKFFEAFEIFRQMIRA-EMQPDLVTFVSIIPSCENYCSFQCGES 370
+N VWN MI Y Q+ E+ E+F + I + E+ D VT++ + + G
Sbjct: 280 RNIEVWNTMIGVYVQNDCLVESIELFLEAIGSKEIVSDEVTYLLAASAVSALQQVELGRQ 339
Query: 371 LTACVIKNGLGNQPSVLTALLSMYAKLGNIDSAKFLFDQIPNRNLLCWNAMMSAYVRNRF 430
V KN ++ +L+ MY++ G++ + +F + R+++ WN M+SA+V+N
Sbjct: 340 FHGFVSKNFRELPIVIVNSLMVMYSRCGSVHKSFGVFLSMRERDVVSWNTMISAFVQNGL 399
Query: 431 WDASLAVFRQMQFAGLNPDAVSIISVLSGCSKLDDVLLGKSAHAFSLRKGIVSNLDVLNA 490
D L + +MQ G D +++ ++LS S L + +GK HAF +R+GI + +N+
Sbjct: 400 DDEGLMLVYEMQKQGFKIDYITVTALLSAASNLRNKEIGKQTHAFLIRQGI--QFEGMNS 457
Query: 491 LLM-FYSDGGQFSYAFTLFH--RMSTRSSVSWNTLISRCVQNGAVEEAVILLQRMQKEGV 547
L+ YS G + LF + R +WN++IS QNG E+ ++ ++M ++ +
Sbjct: 458 YLIDMYSKSGLIRISQKLFEGSGYAERDQATWNSMISGYTQNGHTEKTFLVFRKMLEQNI 517
Query: 548 ELDMVTLISFLPNLNKNGNIKQGMVIHGYAIKTGCVADVTFLNALITMYCNCGSTNDGRL 607
+ VT+ S LP ++ G++ G +HG++I+ +V +AL+ MY G+ +
Sbjct: 518 RPNAVTVASILPACSQIGSVDLGKQLHGFSIRQYLDQNVFVASALVDMYSKAGAI---KY 574
Query: 608 CLLLFQMGDKREISLWNAIISVYVQTNKAKQAVAFFTELLGAGLEPDNVTVLSIISA 664
+F +R + +I Y Q ++A++ F + +G++PD +T ++++SA
Sbjct: 575 AEDMFSQTKERNSVTYTTMILGYGQHGMGERAISLFLSMQESGIKPDAITFVAVLSA 631
Score = 167 bits (424), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 96/319 (30%), Positives = 171/319 (53%), Gaps = 3/319 (0%)
Query: 145 SDDFTFPFLIKACSSLSDLRIGREIHCVIFRTGYHQNLVIQTALVDFYAKKGEMLTARLL 204
SD+ T+ A S+L + +GR+ H + + +VI +L+ Y++ G + + +
Sbjct: 316 SDEVTYLLAASAVSALQQVELGRQFHGFVSKNFRELPIVIVNSLMVMYSRCGSVHKSFGV 375
Query: 205 FDQIPLADLVSCNTLMAGYSFNGLDQEALETFRRILTVGLKPNVSTFSSVIPVCTRLGHF 264
F + D+VS NT+++ + NGLD E L + G K + T ++++ + L +
Sbjct: 376 FLSMRERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFKIDYITVTALLSAASNLRNK 435
Query: 265 CFGKSLHGFTIKSGYLFDDFLVPALISMYAGDLDLSTARKLFD--SLLEKNASVWNAMIS 322
GK H F I+ G F+ + LI MY+ + ++KLF+ E++ + WN+MIS
Sbjct: 436 EIGKQTHAFLIRQGIQFEG-MNSYLIDMYSKSGLIRISQKLFEGSGYAERDQATWNSMIS 494
Query: 323 AYTQSKKFFEAFEIFRQMIRAEMQPDLVTFVSIIPSCENYCSFQCGESLTACVIKNGLGN 382
YTQ+ + F +FR+M+ ++P+ VT SI+P+C S G+ L I+ L
Sbjct: 495 GYTQNGHTEKTFLVFRKMLEQNIRPNAVTVASILPACSQIGSVDLGKQLHGFSIRQYLDQ 554
Query: 383 QPSVLTALLSMYAKLGNIDSAKFLFDQIPNRNLLCWNAMMSAYVRNRFWDASLAVFRQMQ 442
V +AL+ MY+K G I A+ +F Q RN + + M+ Y ++ + ++++F MQ
Sbjct: 555 NVFVASALVDMYSKAGAIKYAEDMFSQTKERNSVTYTTMILGYGQHGMGERAISLFLSMQ 614
Query: 443 FAGLNPDAVSIISVLSGCS 461
+G+ PDA++ ++VLS CS
Sbjct: 615 ESGIKPDAITFVAVLSACS 633
Score = 160 bits (404), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 136/515 (26%), Positives = 235/515 (45%), Gaps = 51/515 (9%)
Query: 380 LGNQPSVLTALLSMYAKLGNIDSAKFLFDQIPNRNLLCWNAMMSAYVRNRFWDASLAVFR 439
L Q + + LS + GN A+ LFD IP + WN ++ ++ N +L +
Sbjct: 35 LTPQTPSIRSRLSKICQDGNPQLARQLFDAIPKPTTVLWNTIIIGFICNNLPHEALLFYS 94
Query: 440 QMQFAG--LNPDAVSIISVLSGCSKLDDVLLGKSAHAFSLRKGIVSNLDVLNALLMFY-- 495
+M+ N DA + S L C++ ++ GK+ H +R S+ V N+L+ Y
Sbjct: 95 RMKKTAPFTNCDAYTYSSTLKACAETKNLKAGKAVHCHLIRCLQNSSRVVHNSLMNMYVS 154
Query: 496 ----SDGGQFSYAFTLFHRMSTRSSVSWNTLISRCVQNGAVEEAVILLQRMQKEGVELDM 551
D ++ +F M ++ V+WNTLIS V+ G EA M + V+
Sbjct: 155 CLNAPDCFEYDVVRKVFDNMRRKNVVAWNTLISWYVKTGRNAEACRQFGIMMRMEVKPSP 214
Query: 552 VTLISFLPNLNKNGNIKQGMVIHGYAIKTG--CVADVTFLNALITMYCNCGSTNDGRLCL 609
V+ ++ P ++ + +IK+ V +G +K G V D+ +++ I+MY G R
Sbjct: 215 VSFVNVFPAVSISRSIKKANVFYGLMLKLGDEYVKDLFVVSSAISMYAELGDIESSR--- 271
Query: 610 LLFQMGDKREISLWNAIISVYVQTNKAKQAVAFFTELLGAG-LEPDNVTVLSIISAGVLI 668
+F +R I +WN +I VYVQ + +++ F E +G+ + D VT L SA +
Sbjct: 272 RVFDSCVERNIEVWNTMIGVYVQNDCLVESIELFLEAIGSKEIVSDEVTYLLAASAVSAL 331
Query: 669 NSLNLTHSLMAFVIRKGLDKHVAVSNALMDSYVRCGNISMARKLFGSLIYKDAFSWSVMI 728
+ L FV + + + + N+LM Y RCG++ + +F S+ +D SW+ MI
Sbjct: 332 QQVELGRQFHGFVSKNFRELPIVIVNSLMVMYSRCGSVHKSFGVFLSMRERDVVSWNTMI 391
Query: 729 NGYGLYGDGEAALELFKQMQLSGVRPNEITYLGVLSACS-----------HAGLVEQSKM 777
+ + G + L L +MQ G + + IT +LSA S HA L+ Q +
Sbjct: 392 SAFVQNGLDDEGLMLVYEMQKQGFKIDYITVTALLSAASNLRNKEIGKQTHAFLIRQG-I 450
Query: 778 VFKSMVEH-----------GISQKM-----------EHYACMVDLLGRTGHLNEAFIFVK 815
F+ M + ISQK+ + M+ + GH + F+ +
Sbjct: 451 QFEGMNSYLIDMYSKSGLIRISQKLFEGSGYAERDQATWNSMISGYTQNGHTEKTFLVFR 510
Query: 816 KL---PCKPSVSILESLLGACRIHGNVELGEIISG 847
K+ +P+ + S+L AC G+V+LG+ + G
Sbjct: 511 KMLEQNIRPNAVTVASILPACSQIGSVDLGKQLHG 545
Score = 74.3 bits (181), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 72/147 (48%)
Query: 116 NLMIRGLSNCGLHADLLHVYIKCRLSGCPSDDFTFPFLIKACSSLSDLRIGREIHCVIFR 175
N MI G + G V+ K + T ++ ACS + + +G+++H R
Sbjct: 490 NSMISGYTQNGHTEKTFLVFRKMLEQNIRPNAVTVASILPACSQIGSVDLGKQLHGFSIR 549
Query: 176 TGYHQNLVIQTALVDFYAKKGEMLTARLLFDQIPLADLVSCNTLMAGYSFNGLDQEALET 235
QN+ + +ALVD Y+K G + A +F Q + V+ T++ GY +G+ + A+
Sbjct: 550 QYLDQNVFVASALVDMYSKAGAIKYAEDMFSQTKERNSVTYTTMILGYGQHGMGERAISL 609
Query: 236 FRRILTVGLKPNVSTFSSVIPVCTRLG 262
F + G+KP+ TF +V+ C+ G
Sbjct: 610 FLSMQESGIKPDAITFVAVLSACSYSG 636
>sp|Q7Y211|PP285_ARATH Pentatricopeptide repeat-containing protein At3g57430,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H81 PE=2
SV=2
Length = 890
Score = 375 bits (963), Expect = e-103, Method: Compositional matrix adjust.
Identities = 217/687 (31%), Positives = 372/687 (54%), Gaps = 23/687 (3%)
Query: 230 QEALETFRRILTVGLKPNVSTFSSVIPVCTRLGHFCFGKSLHGFTIKSGYLFDDFLVP-A 288
+EA+ T+ ++ +G+KP+ F +++ L GK +H K GY D V
Sbjct: 79 REAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANT 138
Query: 289 LISMYAGDLDLSTARKLFDSLLEKNASVWNAMISAYTQSKKFFEAFEIFRQMIRAEMQPD 348
L+++Y D K+FD + E+N WN++IS+ +K+ A E FR M+ ++P
Sbjct: 139 LVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPS 198
Query: 349 LVTFVSIIPSCENYC---SFQCGESLTACVIKNGLGNQPSVLTALLSMYAKLGNIDSAKF 405
T VS++ +C N G+ + A ++ G N ++ L++MY KLG + S+K
Sbjct: 199 SFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGELNS-FIINTLVAMYGKLGKLASSKV 257
Query: 406 LFDQIPNRNLLCWNAMMSAYVRNRFWDASLAVFRQMQFAGLNPDAVSIISVLSGCSKLDD 465
L R+L+ WN ++S+ +N +L R+M G+ PD +I SVL CS L+
Sbjct: 258 LLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEM 317
Query: 466 VLLGKSAHAFSLRKG-IVSNLDVLNALLMFYSDGGQFSYAFTLFHRMSTRSSVSWNTLIS 524
+ GK HA++L+ G + N V +AL+ Y + Q +F M R WN +I+
Sbjct: 318 LRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIA 377
Query: 525 RCVQNGAVEEAVILLQRMQKE-GVELDMVTLISFLPNLNKNGNIKQGMVIHGYAIKTGCV 583
QN +EA++L M++ G+ + T+ +P ++G + IHG+ +K G
Sbjct: 378 GYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLD 437
Query: 584 ADVTFLNALITMYCNCGSTNDGRLCLLLFQMGDKREISLWNAIISVYVQTNKAKQAVAFF 643
D N L+ MY G + + + +F + R++ WN +I+ YV + + A+
Sbjct: 438 RDRFVQNTLMDMYSRLGKID---IAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLL 494
Query: 644 TELL--------GAG---LEPDNVTVLSIISAGVLINSLNLTHSLMAFVIRKGLDKHVAV 692
++ GA L+P+++T+++I+ + +++L + A+ I+ L VAV
Sbjct: 495 HKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAV 554
Query: 693 SNALMDSYVRCGNISMARKLFGSLIYKDAFSWSVMINGYGLYGDGEAALELFKQMQLSGV 752
+AL+D Y +CG + M+RK+F + K+ +W+V+I YG++G+G+ A++L + M + GV
Sbjct: 555 GSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGV 614
Query: 753 RPNEITYLGVLSACSHAGLVEQSKMVFKSM-VEHGISQKMEHYACMVDLLGRTGHLNEAF 811
+PNE+T++ V +ACSH+G+V++ +F M ++G+ +HYAC+VDLLGR G + EA+
Sbjct: 615 KPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAY 674
Query: 812 IFVKKLPCK-PSVSILESLLGACRIHGNVELGEIISGMLFEMDPENPGSYVMLHNIYASA 870
+ +P SLLGA RIH N+E+GEI + L +++P YV+L NIY+SA
Sbjct: 675 QLMNMMPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSSA 734
Query: 871 GRWEDAYRVRSCMKRSRLKKVPGFSLV 897
G W+ A VR MK ++K PG S +
Sbjct: 735 GLWDKATEVRRNMKEQGVRKEPGCSWI 761
Score = 266 bits (681), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 185/684 (27%), Positives = 347/684 (50%), Gaps = 39/684 (5%)
Query: 134 VYIKCRLSGCPSDDFTFPFLIKACSSLSDLRIGREIHCVIFRTGYH-QNLVIQTALVDFY 192
Y+ + G D++ FP L+KA + L D+ +G++IH +++ GY ++ + LV+ Y
Sbjct: 84 TYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLY 143
Query: 193 AKKGEMLTARLLFDQIPLADLVSCNTLMAGY-SFNGLDQEALETFRRILTVGLKPNVSTF 251
K G+ +FD+I + VS N+L++ SF + ALE FR +L ++P+ T
Sbjct: 144 RKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEM-ALEAFRCMLDENVEPSSFTL 202
Query: 252 SSVIPVCTRLGH---FCFGKSLHGFTIKSGYLFDDFLVPALISMYAGDLDLSTARKLFDS 308
SV+ C+ L GK +H + ++ G L + F++ L++MY L++++ L S
Sbjct: 203 VSVVTACSNLPMPEGLMMGKQVHAYGLRKGEL-NSFIINTLVAMYGKLGKLASSKVLLGS 261
Query: 309 LLEKNASVWNAMISAYTQSKKFFEAFEIFRQMIRAEMQPDLVTFVSIIPSCENYCSFQCG 368
++ WN ++S+ Q+++ EA E R+M+ ++PD T S++P+C + + G
Sbjct: 262 FGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTG 321
Query: 369 ESLTACVIKNGLGNQPS-VLTALLSMYAKLGNIDSAKFLFDQIPNRNLLCWNAMMSAYVR 427
+ L A +KNG ++ S V +AL+ MY + S + +FD + +R + WNAM++ Y +
Sbjct: 322 KELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQ 381
Query: 428 NRFWDASLAVFRQM-QFAGLNPDAVSIISVLSGCSKLDDVLLGKSAHAFSLRKGIVSNLD 486
N +L +F M + AGL ++ ++ V+ C + ++ H F +++G+ +
Sbjct: 382 NEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRF 441
Query: 487 VLNALLMFYSDGGQFSYAFTLFHRMSTRSSVSWNTLISRCVQNGAVEEAVILLQRMQ--- 543
V N L+ YS G+ A +F +M R V+WNT+I+ V + E+A++LL +MQ
Sbjct: 442 VQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLE 501
Query: 544 --------KEGVELDMVTLISFLPNLNKNGNIKQGMVIHGYAIKTGCVADVTFLNALITM 595
+ ++ + +TL++ LP+ + +G IH YAIK DV +AL+ M
Sbjct: 502 RKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDM 561
Query: 596 YCNCGSTNDGRLCLLLFQMGDKREISLWNAIISVYVQTNKAKQAVAFFTELLGAGLEPDN 655
Y CG R +F ++ + WN II Y ++A+ ++ G++P+
Sbjct: 562 YAKCGCLQMSR---KVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNE 618
Query: 656 VTVLSIISAGVLINSLNLTHSLMAFVIRK---GLDKHVAVSNALMDSYVRCGNISMARKL 712
VT +S+ +A +S + L F + K G++ ++D R G I A +L
Sbjct: 619 VTFISVFAA--CSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQL 676
Query: 713 FGSLI--YKDAFSWSVMINGYGLYGD---GEAALELFKQMQLSGVRPNEITYLGVLSAC- 766
+ + A +WS ++ ++ + GE A + Q++ PN ++ +L+
Sbjct: 677 MNMMPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQNLIQLE-----PNVASHYVLLANIY 731
Query: 767 SHAGLVEQSKMVFKSMVEHGISQK 790
S AGL +++ V ++M E G+ ++
Sbjct: 732 SSAGLWDKATEVRRNMKEQGVRKE 755
Score = 248 bits (634), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 177/641 (27%), Positives = 316/641 (49%), Gaps = 59/641 (9%)
Query: 312 KNASVWNAMISAYTQSKKFFEAFEIFRQMIRAEMQPDLVTFVSIIPSCENYCSFQCGESL 371
++ W ++ + +S EA + MI ++PD F +++ + + + G+ +
Sbjct: 60 RSPEWWIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQI 119
Query: 372 TACVIKNGLG-NQPSVLTALLSMYAKLGNIDSAKFLFDQIPNRNLLCWNAMMSAYVRNRF 430
A V K G G + +V L+++Y K G+ + +FD+I RN + WN+++S+
Sbjct: 120 HAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEK 179
Query: 431 WDASLAVFRQMQFAGLNPDAVSIISVLSGCSKL---DDVLLGKSAHAFSLRKGIVSNLDV 487
W+ +L FR M + P + +++SV++ CS L + +++GK HA+ LRKG +++ +
Sbjct: 180 WEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGELNSF-I 238
Query: 488 LNALLMFYSDGGQFSYAFTLFHRMSTRSSVSWNTLISRCVQNGAVEEAVILLQRMQKEGV 547
+N L+ Y G+ + + L R V+WNT++S QN + EA+ L+ M EGV
Sbjct: 239 INTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGV 298
Query: 548 ELDMVTLISFLPNLNKNGNIKQGMVIHGYAIKTGCVADVTFL-NALITMYCNCGSTNDGR 606
E D T+ S LP + ++ G +H YA+K G + + +F+ +AL+ MYCNC GR
Sbjct: 299 EPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGR 358
Query: 607 LCLLLFQMGDKREISLWNAIISVYVQTNKAKQAVAFFTEL-LGAGLEPDNVTVLSIISAG 665
+F R+I LWNA+I+ Y Q K+A+ F + AGL ++ T+ ++ A
Sbjct: 359 ---RVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPAC 415
Query: 666 VLINSLNLTHSLMAFVIRKGLDKHVAVSNALMDSYVRCGNISMARKLFGSLIYKDAFSWS 725
V + + ++ FV+++GLD+ V N LMD Y R G I +A ++FG + +D +W+
Sbjct: 416 VRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWN 475
Query: 726 VMINGYGLYGDGEAALELFKQMQ-----------LSGVRPNEITYLGVLSACSHAGLVEQ 774
MI GY E AL L +MQ ++PN IT + +L +C+ + +
Sbjct: 476 TMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAK 535
Query: 775 SKMVFKSMVEHGISQKMEHYACMVDLLGRTGHLNEAFIFVKKLPCKPSVSILESLLGACR 834
K + +++ ++ + + +VD+ + G L + ++P K +V ++ A
Sbjct: 536 GKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQK-NVITWNVIIMAYG 594
Query: 835 IHGN---------------VELGEII----------SGMLFE-------MDPE---NPGS 859
+HGN V+ E+ SGM+ E M P+ P S
Sbjct: 595 MHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSS 654
Query: 860 --YVMLHNIYASAGRWEDAYRVRSCMKRSRLKKVPGFSLVG 898
Y + ++ AGR ++AY++ + M R K SL+G
Sbjct: 655 DHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLG 695
Score = 125 bits (313), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 91/328 (27%), Positives = 155/328 (47%), Gaps = 19/328 (5%)
Query: 114 LQNLMIRGLSNCGLHADLLHVYIKCRLS-GCPSDDFTFPFLIKACSSLSDLRIGREIHCV 172
L N MI G S + L ++I S G ++ T ++ AC IH
Sbjct: 371 LWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGF 430
Query: 173 IFRTGYHQNLVIQTALVDFYAKKGEMLTARLLFDQIPLADLVSCNTLMAGYSFNGLDQEA 232
+ + G ++ +Q L+D Y++ G++ A +F ++ DLV+ NT++ GY F+ ++A
Sbjct: 431 VVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDA 490
Query: 233 L------ETFRRILTVG-----LKPNVSTFSSVIPVCTRLGHFCFGKSLHGFTIKSGYLF 281
L + R ++ G LKPN T +++P C L GK +H + IK+
Sbjct: 491 LLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLAT 550
Query: 282 DDFLVPALISMYAGDLDLSTARKLFDSLLEKNASVWNAMISAYTQSKKFFEAFEIFRQMI 341
D + AL+ MYA L +RK+FD + +KN WN +I AY EA ++ R M+
Sbjct: 551 DVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMM 610
Query: 342 RAEMQPDLVTFVSIIPSCENYCSFQCGESLTA-CVIKNGLGNQPSV--LTALLSMYAKLG 398
++P+ VTF+S+ +C + S E L V+K G +PS ++ + + G
Sbjct: 611 VQGVKPNEVTFISVFAACSH--SGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAG 668
Query: 399 NIDSAKFLFDQIPN--RNLLCWNAMMSA 424
I A L + +P W++++ A
Sbjct: 669 RIKEAYQLMNMMPRDFNKAGAWSSLLGA 696
Score = 95.1 bits (235), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 74/281 (26%), Positives = 140/281 (49%), Gaps = 14/281 (4%)
Query: 513 TRSSVSWNTLISRCVQNGAVEEAVILLQRMQKEGVELDMVTLISFLPNLNKNGNIKQGMV 572
+RS W L+ V++ + EAV+ M G++ D + L + +++ G
Sbjct: 59 SRSPEWWIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQ 118
Query: 573 IHGYAIKTGCVAD-VTFLNALITMYCNCGSTNDGRLCLLLFQMGDKREISLWNAIISVYV 631
IH + K G D VT N L+ +Y CG + G + + ++ ++ ++S WN++IS
Sbjct: 119 IHAHVYKFGYGVDSVTVANTLVNLYRKCG--DFGAVYKVFDRISERNQVS-WNSLISSLC 175
Query: 632 QTNKAKQAVAFFTELLGAGLEPDNVTVLSIISAGVLINSLNLTHSLM------AFVIRKG 685
K + A+ F +L +EP + T++S+++A ++L + LM A+ +RKG
Sbjct: 176 SFEKWEMALEAFRCMLDENVEPSSFTLVSVVTA---CSNLPMPEGLMMGKQVHAYGLRKG 232
Query: 686 LDKHVAVSNALMDSYVRCGNISMARKLFGSLIYKDAFSWSVMINGYGLYGDGEAALELFK 745
+ + + N L+ Y + G ++ ++ L GS +D +W+ +++ ALE +
Sbjct: 233 -ELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLR 291
Query: 746 QMQLSGVRPNEITYLGVLSACSHAGLVEQSKMVFKSMVEHG 786
+M L GV P+E T VL ACSH ++ K + +++G
Sbjct: 292 EMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNG 332
>sp|O49619|PP350_ARATH Pentatricopeptide repeat-containing protein At4g35130,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H27 PE=3
SV=1
Length = 804
Score = 370 bits (951), Expect = e-101, Method: Compositional matrix adjust.
Identities = 211/617 (34%), Positives = 348/617 (56%), Gaps = 13/617 (2%)
Query: 287 PALISMYAGDLD---LSTARKLFDSLLEKNASVWNAMISAYTQSKKFFEAFEIFRQMIRA 343
PAL G D + A +LFD + + +A +WN MI +T + EA + + +M+ A
Sbjct: 65 PALTRALRGFADSRLMEDALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFA 124
Query: 344 EMQPDLVTFVSIIPSCENYCSFQCGESLTACVIKNGLGNQPSVLTALLSMYAKLGNIDSA 403
++ D T+ +I S S + G+ + A VIK G + V +L+S+Y KLG A
Sbjct: 125 GVKADTFTYPFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDA 184
Query: 404 KFLFDQIPNRNLLCWNAMMSAYVRNRFWDASLAVFRQMQFAGLNPDAVSIISVLSGCSKL 463
+ +F+++P R+++ WN+M+S Y+ +SL +F++M G PD S +S L CS +
Sbjct: 185 EKVFEEMPERDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHV 244
Query: 464 DDVLLGKSAHAFSLRKGI-VSNLDVLNALLMFYSDGGQFSYAFTLFHRMSTRSSVSWNTL 522
+GK H ++R I ++ V+ ++L YS G+ SYA +F+ M R+ V+WN +
Sbjct: 245 YSPKMGKEIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVM 304
Query: 523 ISRCVQNGAVEEAVILLQRM-QKEGVELDMVTLISFLPNLNKNGNIKQGMVIHGYAIKTG 581
I +NG V +A + Q+M ++ G++ D++T I+ LP I +G IHGYA++ G
Sbjct: 305 IGCYARNGRVTDAFLCFQKMSEQNGLQPDVITSINLLPA----SAILEGRTIHGYAMRRG 360
Query: 582 CVADVTFLNALITMYCNCGSTNDGRLCLLLFQMGDKREISLWNAIISVYVQTNKAKQAVA 641
+ + ALI MY CG + + +M +K IS WN+II+ YVQ K A+
Sbjct: 361 FLPHMVLETALIDMYGECGQLKSAEV--IFDRMAEKNVIS-WNSIIAAYVQNGKNYSALE 417
Query: 642 FFTELLGAGLEPDNVTVLSIISAGVLINSLNLTHSLMAFVIRKGLDKHVAVSNALMDSYV 701
F EL + L PD+ T+ SI+ A SL+ + A++++ + + N+L+ Y
Sbjct: 418 LFQELWDSSLVPDSTTIASILPAYAESLSLSEGREIHAYIVKSRYWSNTIILNSLVHMYA 477
Query: 702 RCGNISMARKLFGSLIYKDAFSWSVMINGYGLYGDGEAALELFKQMQLSGVRPNEITYLG 761
CG++ ARK F ++ KD SW+ +I Y ++G G ++ LF +M S V PN+ T+
Sbjct: 478 MCGDLEDARKCFNHILLKDVVSWNSIIMAYAVHGFGRISVWLFSEMIASRVNPNKSTFAS 537
Query: 762 VLSACSHAGLVEQSKMVFKSMV-EHGISQKMEHYACMVDLLGRTGHLNEAFIFVKKLPCK 820
+L+ACS +G+V++ F+SM E+GI +EHY CM+DL+GRTG+ + A F++++P
Sbjct: 538 LLAACSISGMVDEGWEYFESMKREYGIDPGIEHYGCMLDLIGRTGNFSAAKRFLEEMPFV 597
Query: 821 PSVSILESLLGACRIHGNVELGEIISGMLFEMDPENPGSYVMLHNIYASAGRWEDAYRVR 880
P+ I SLL A R H ++ + E + +F+M+ +N G YV+L N+YA AGRWED R++
Sbjct: 598 PTARIWGSLLNASRNHKDITIAEFAAEQIFKMEHDNTGCYVLLLNMYAEAGRWEDVNRIK 657
Query: 881 SCMKRSRLKKVPGFSLV 897
M+ + + S V
Sbjct: 658 LLMESKGISRTSSRSTV 674
Score = 235 bits (599), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 140/507 (27%), Positives = 272/507 (53%), Gaps = 8/507 (1%)
Query: 67 LKLKIHNKNLKALPLPALALRTLEAFEITS-YHIALSSFPIIKKPCVFLQNLMIRGLSNC 125
L L+ K K + PAL R L F + AL F + K FL N+MI+G ++C
Sbjct: 50 LVLRDRYKVTKQVNDPALT-RALRGFADSRLMEDALQLFDEMNKADAFLWNVMIKGFTSC 108
Query: 126 GLHADLLHVYIKCRLSGCPSDDFTFPFLIKACSSLSDLRIGREIHCVIFRTGYHQNLVIQ 185
GL+ + + Y + +G +D FT+PF+IK+ + +S L G++IH ++ + G+ ++ +
Sbjct: 109 GLYIEAVQFYSRMVFAGVKADTFTYPFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVC 168
Query: 186 TALVDFYAKKGEMLTARLLFDQIPLADLVSCNTLMAGYSFNGLDQEALETFRRILTVGLK 245
+L+ Y K G A +F+++P D+VS N++++GY G +L F+ +L G K
Sbjct: 169 NSLISLYMKLGCAWDAEKVFEEMPERDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFK 228
Query: 246 PNVSTFSSVIPVCTRLGHFCFGKSLHGFTIKSGYLFDDFLV-PALISMYAGDLDLSTARK 304
P+ + S + C+ + GK +H ++S D +V +++ MY+ ++S A +
Sbjct: 229 PDRFSTMSALGACSHVYSPKMGKEIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAER 288
Query: 305 LFDSLLEKNASVWNAMISAYTQSKKFFEAFEIFRQMIRAE-MQPDLVTFVSIIPSCENYC 363
+F+ ++++N WN MI Y ++ + +AF F++M +QPD++T ++++P+
Sbjct: 289 IFNGMIQRNIVAWNVMIGCYARNGRVTDAFLCFQKMSEQNGLQPDVITSINLLPA----S 344
Query: 364 SFQCGESLTACVIKNGLGNQPSVLTALLSMYAKLGNIDSAKFLFDQIPNRNLLCWNAMMS 423
+ G ++ ++ G + TAL+ MY + G + SA+ +FD++ +N++ WN++++
Sbjct: 345 AILEGRTIHGYAMRRGFLPHMVLETALIDMYGECGQLKSAEVIFDRMAEKNVISWNSIIA 404
Query: 424 AYVRNRFWDASLAVFRQMQFAGLNPDAVSIISVLSGCSKLDDVLLGKSAHAFSLRKGIVS 483
AYV+N ++L +F+++ + L PD+ +I S+L ++ + G+ HA+ ++ S
Sbjct: 405 AYVQNGKNYSALELFQELWDSSLVPDSTTIASILPAYAESLSLSEGREIHAYIVKSRYWS 464
Query: 484 NLDVLNALLMFYSDGGQFSYAFTLFHRMSTRSSVSWNTLISRCVQNGAVEEAVILLQRMQ 543
N +LN+L+ Y+ G A F+ + + VSWN++I +G +V L M
Sbjct: 465 NTIILNSLVHMYAMCGDLEDARKCFNHILLKDVVSWNSIIMAYAVHGFGRISVWLFSEMI 524
Query: 544 KEGVELDMVTLISFLPNLNKNGNIKQG 570
V + T S L + +G + +G
Sbjct: 525 ASRVNPNKSTFASLLAACSISGMVDEG 551
Score = 124 bits (311), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 87/343 (25%), Positives = 158/343 (46%), Gaps = 9/343 (2%)
Query: 484 NLDVLNALLMFYSDGGQFSYAFTLFHRMSTRSSVSWNTLISRCVQNGAVEEAVILLQRMQ 543
N L L ++D A LF M+ + WN +I G EAV RM
Sbjct: 63 NDPALTRALRGFADSRLMEDALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMV 122
Query: 544 KEGVELDMVTLISFLPNLNKNGNIKQGMVIHGYAIKTGCVADVTFLNALITMYCNCGSTN 603
GV+ D T + ++ ++++G IH IK G V+DV N+LI++Y G
Sbjct: 123 FAGVKADTFTYPFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAW 182
Query: 604 DGRLCLLLFQMGDKREISLWNAIISVYVQTNKAKQAVAFFTELLGAGLEPDNVTVLSIIS 663
D +F+ +R+I WN++IS Y+ ++ F E+L G +PD + +S +
Sbjct: 183 DAE---KVFEEMPERDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALG 239
Query: 664 AGVLINSLNLTHSLMAFVIRKGLDK-HVAVSNALMDSYVRCGNISMARKLFGSLIYKDAF 722
A + S + + +R ++ V V +++D Y + G +S A ++F +I ++
Sbjct: 240 ACSHVYSPKMGKEIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIV 299
Query: 723 SWSVMINGYGLYGDGEAALELFKQM-QLSGVRPNEITYLGVLSACSHAGLVEQSKMVFKS 781
+W+VMI Y G A F++M + +G++P+ IT + +L A + + + + +
Sbjct: 300 AWNVMIGCYARNGRVTDAFLCFQKMSEQNGLQPDVITSINLLPASA----ILEGRTIHGY 355
Query: 782 MVEHGISQKMEHYACMVDLLGRTGHLNEAFIFVKKLPCKPSVS 824
+ G M ++D+ G G L A + ++ K +S
Sbjct: 356 AMRRGFLPHMVLETALIDMYGECGQLKSAEVIFDRMAEKNVIS 398
>sp|Q9ZUW3|PP172_ARATH Pentatricopeptide repeat-containing protein At2g27610
OS=Arabidopsis thaliana GN=PCMP-H60 PE=2 SV=1
Length = 868
Score = 370 bits (949), Expect = e-101, Method: Compositional matrix adjust.
Identities = 220/706 (31%), Positives = 360/706 (50%), Gaps = 16/706 (2%)
Query: 198 MLTARLLFDQIPLADLVSCNTLMAGYSFNGLDQEALETFRRILTVGLKPNVSTFSSVIPV 257
+ A LFD+ P D S +L+ G+S +G QEA F I +G++ + S FSSV+ V
Sbjct: 43 LYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVLKV 102
Query: 258 CTRLGHFCFGKSLHGFTIKSGYLFDDFLVPALISMYAGDLDLSTARKLFDSLLEKNASVW 317
L FG+ LH IK G+L D + +L+ Y + RK+FD + E+N W
Sbjct: 103 SATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTW 162
Query: 318 NAMISAYTQSKKFFEAFEIFRQMIRAEMQPDLVTFVSIIPSCENYCSFQCGESLTACVIK 377
+IS Y ++ E +F +M QP+ TF + + G + V+K
Sbjct: 163 TTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVK 222
Query: 378 NGLGNQPSVLTALLSMYAKLGNIDSAKFLFDQIPNRNLLCWNAMMSAYVRNRFWDASLAV 437
NGL V +L+++Y K GN+ A+ LFD+ ++++ WN+M+S Y N +L +
Sbjct: 223 NGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGM 282
Query: 438 FRQMQFAGLNPDAVSIISVLSGCSKLDDVLLGKSAHAFSLRKGIVSNLDVLNALLMFYSD 497
F M+ + S SV+ C+ L ++ + H ++ G + + ++ AL++ YS
Sbjct: 283 FYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSK 342
Query: 498 GGQFSYAFTLFHRMS-TRSSVSWNTLISRCVQNGAVEEAVILLQRMQKEGV---ELDMVT 553
A LF + + VSW +IS +QN EEAV L M+++GV E
Sbjct: 343 CTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSV 402
Query: 554 LISFLPNLNKNGNIKQGMVIHGYAIKTGCVADVTFLNALITMYCNCGSTNDGRLCLLLFQ 613
+++ LP ++ + +H +KT T AL+ Y G + +F
Sbjct: 403 ILTALPVISPSE-------VHAQVVKTNYERSSTVGTALLDAYVKLGKVEEA---AKVFS 452
Query: 614 MGDKREISLWNAIISVYVQTNKAKQAVAFFTELLGAGLEPDNVTVLSIISAGVLIN-SLN 672
D ++I W+A+++ Y QT + + A+ F EL G++P+ T SI++ N S+
Sbjct: 453 GIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMG 512
Query: 673 LTHSLMAFVIRKGLDKHVAVSNALMDSYVRCGNISMARKLFGSLIYKDAFSWSVMINGYG 732
F I+ LD + VS+AL+ Y + GNI A ++F KD SW+ MI+GY
Sbjct: 513 QGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYA 572
Query: 733 LYGDGEAALELFKQMQLSGVRPNEITYLGVLSACSHAGLVEQSKMVFKSMVEH-GISQKM 791
+G AL++FK+M+ V+ + +T++GV +AC+HAGLVE+ + F MV I+
Sbjct: 573 QHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTK 632
Query: 792 EHYACMVDLLGRTGHLNEAFIFVKKLPCKPSVSILESLLGACRIHGNVELGEIISGMLFE 851
EH +CMVDL R G L +A ++ +P +I ++L ACR+H ELG + + +
Sbjct: 633 EHNSCMVDLYSRAGQLEKAMKVIENMPNPAGSTIWRTILAACRVHKKTELGRLAAEKIIA 692
Query: 852 MDPENPGSYVMLHNIYASAGRWEDAYRVRSCMKRSRLKKVPGFSLV 897
M PE+ +YV+L N+YA +G W++ +VR M +KK PG+S +
Sbjct: 693 MKPEDSAAYVLLSNMYAESGDWQERAKVRKLMNERNVKKEPGYSWI 738
Score = 218 bits (555), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 137/528 (25%), Positives = 268/528 (50%), Gaps = 9/528 (1%)
Query: 104 FPIIKKPCVFLQNLMIRGLSNCGLHADLLHVYIKCRLSGCPSDDFTFPFLIKACSSLSDL 163
F +K+ V +I G + ++ ++L ++++ + G + FTF + +
Sbjct: 151 FDEMKERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVG 210
Query: 164 RIGREIHCVIFRTGYHQNLVIQTALVDFYAKKGEMLTARLLFDQIPLADLVSCNTLMAGY 223
G ++H V+ + G + + + +L++ Y K G + AR+LFD+ + +V+ N++++GY
Sbjct: 211 GRGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGY 270
Query: 224 SFNGLDQEALETFRRILTVGLKPNVSTFSSVIPVCTRLGHFCFGKSLHGFTIKSGYLFDD 283
+ NGLD EAL F + ++ + S+F+SVI +C L F + LH +K G+LFD
Sbjct: 271 AANGLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQ 330
Query: 284 FLVPALISMYAGDLDLSTARKLFDSL-LEKNASVWNAMISAYTQSKKFFEAFEIFRQMIR 342
+ AL+ Y+ + A +LF + N W AMIS + Q+ EA ++F +M R
Sbjct: 331 NIRTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKR 390
Query: 343 AEMQPDLVTFVSIIPSCENYCSFQCGESLTACVIKNGLGNQPSVLTALLSMYAKLGNIDS 402
++P+ T+ I+ + + + A V+K +V TALL Y KLG ++
Sbjct: 391 KGVRPNEFTYSVILTALPVISPSE----VHAQVVKTNYERSSTVGTALLDAYVKLGKVEE 446
Query: 403 AKFLFDQIPNRNLLCWNAMMSAYVRNRFWDASLAVFRQMQFAGLNPDAVSIISVLSGCSK 462
A +F I +++++ W+AM++ Y + +A++ +F ++ G+ P+ + S+L+ C+
Sbjct: 447 AAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAA 506
Query: 463 LDDVL-LGKSAHAFSLRKGIVSNLDVLNALLMFYSDGGQFSYAFTLFHRMSTRSSVSWNT 521
+ + GK H F+++ + S+L V +ALL Y+ G A +F R + VSWN+
Sbjct: 507 TNASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNS 566
Query: 522 LISRCVQNGAVEEAVILLQRMQKEGVELDMVTLISFLPNLNKNGNIKQGMVIHGYAIKTG 581
+IS Q+G +A+ + + M+K V++D VT I G +++G ++
Sbjct: 567 MISGYAQHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDC 626
Query: 582 CVADVTFLNA-LITMYCNCGSTNDGRLCLLLFQMGDKREISLWNAIIS 628
+A N+ ++ +Y G + ++ M + ++W I++
Sbjct: 627 KIAPTKEHNSCMVDLYSRAGQLE--KAMKVIENMPNPAGSTIWRTILA 672
>sp|Q3E9N1|PP359_ARATH Pentatricopeptide repeat-containing protein At4g39952,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E98 PE=2
SV=2
Length = 775
Score = 365 bits (938), Expect = e-100, Method: Compositional matrix adjust.
Identities = 220/736 (29%), Positives = 388/736 (52%), Gaps = 9/736 (1%)
Query: 167 REIHCVIFRTGYHQNLVIQTALVDFYAKKGEMLTARLLFDQIPLADLVSCNTLMAGYSFN 226
R+ + +I G +N+ + + L+ YA G+ + +F + D+ N+++ + N
Sbjct: 44 RKHNALIITGGLSENIFVASKLISSYASYGKPNLSSRVFHLVTRRDIFLWNSIIKAHFSN 103
Query: 227 GLDQEALETFRRILTVGLKPNVSTFSSVIPVCTRLGHFCFGKSLHGFTIKSGYLFDDFLV 286
G +L F +L G P+ T V+ C L F G +HG +K G + V
Sbjct: 104 GDYARSLCFFFSMLLSGQSPDHFTAPMVVSACAELLWFHVGTFVHGLVLKHGGFDRNTAV 163
Query: 287 PA-LISMYAGDLDLSTARKLFDSLLEKNASVWNAMISAYTQSKKFFEAFEIFRQMIRAEM 345
A + Y+ L A +FD + +++ W A+IS + Q+ + +M A
Sbjct: 164 GASFVYFYSKCGFLQDACLVFDEMPDRDVVAWTAIISGHVQNGESEGGLGYLCKMHSAGS 223
Query: 346 ---QPDLVTFVSIIPSCENYCSFQCGESLTACVIKNGLGNQPSVLTALLSMYAKLGNIDS 402
+P+ T +C N + + G L +KNGL + V +++ S Y+K GN
Sbjct: 224 DVDKPNPRTLECGFQACSNLGALKEGRCLHGFAVKNGLASSKFVQSSMFSFYSKSGNPSE 283
Query: 403 AKFLFDQIPNRNLLCWNAMMSAYVRNRFWDASLAVFRQMQFAGLNPDAVSIISVLSGCSK 462
A F ++ + ++ W +++++ R+ + S +F +MQ G++PD V I +++ K
Sbjct: 284 AYLSFRELGDEDMFSWTSIIASLARSGDMEESFDMFWEMQNKGMHPDGVVISCLINELGK 343
Query: 463 LDDVLLGKSAHAFSLRKGIVSNLDVLNALLMFYSDGGQFSYAFTLFHRMSTRSSV-SWNT 521
+ V GK+ H F +R + V N+LL Y S A LF R+S + +WNT
Sbjct: 344 MMLVPQGKAFHGFVIRHCFSLDSTVCNSLLSMYCKFELLSVAEKLFCRISEEGNKEAWNT 403
Query: 522 LISRCVQNGAVEEAVILLQRMQKEGVELDMVTLISFLPNLNKNGNIKQGMVIHGYAIKTG 581
++ + + + L +++Q G+E+D + S + + + G + G +H Y +KT
Sbjct: 404 MLKGYGKMKCHVKCIELFRKIQNLGIEIDSASATSVISSCSHIGAVLLGKSLHCYVVKTS 463
Query: 582 CVADVTFLNALITMYCNCGSTNDGRLCLLLFQMGDKREISLWNAIISVYVQTNKAKQAVA 641
++ +N+LI +Y G D + +F D I+ WNA+I+ YV ++++A+A
Sbjct: 464 LDLTISVVNSLIDLY---GKMGDLTVAWRMFCEADTNVIT-WNAMIASYVHCEQSEKAIA 519
Query: 642 FFTELLGAGLEPDNVTVLSIISAGVLINSLNLTHSLMAFVIRKGLDKHVAVSNALMDSYV 701
F ++ +P ++T+++++ A V SL + ++ + ++++S AL+D Y
Sbjct: 520 LFDRMVSENFKPSSITLVTLLMACVNTGSLERGQMIHRYITETEHEMNLSLSAALIDMYA 579
Query: 702 RCGNISMARKLFGSLIYKDAFSWSVMINGYGLYGDGEAALELFKQMQLSGVRPNEITYLG 761
+CG++ +R+LF + KDA W+VMI+GYG++GD E+A+ LF QM+ S V+P T+L
Sbjct: 580 KCGHLEKSRELFDAGNQKDAVCWNVMISGYGMHGDVESAIALFDQMEESDVKPTGPTFLA 639
Query: 762 VLSACSHAGLVEQSKMVFKSMVEHGISQKMEHYACMVDLLGRTGHLNEAFIFVKKLPCKP 821
+LSAC+HAGLVEQ K +F M ++ + ++HY+C+VDLL R+G+L EA V +P P
Sbjct: 640 LLSACTHAGLVEQGKKLFLKMHQYDVKPNLKHYSCLVDLLSRSGNLEEAESTVMSMPFSP 699
Query: 822 SVSILESLLGACRIHGNVELGEIISGMLFEMDPENPGSYVMLHNIYASAGRWEDAYRVRS 881
I +LL +C HG E+G ++ DP+N G Y+ML N+Y++AG+WE+A R R
Sbjct: 700 DGVIWGTLLSSCMTHGEFEMGIRMAERAVASDPQNDGYYIMLANMYSAAGKWEEAERARE 759
Query: 882 CMKRSRLKKVPGFSLV 897
M+ S + K G S+V
Sbjct: 760 MMRESGVGKRAGHSVV 775
Score = 268 bits (685), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 187/700 (26%), Positives = 343/700 (49%), Gaps = 19/700 (2%)
Query: 104 FPIIKKPCVFLQNLMIRGLSNCGLHADLLHVYIKCRLSGCPSDDFTFPFLIKACSSLSDL 163
F ++ + +FL N +I+ + G +A L + LSG D FT P ++ AC+ L
Sbjct: 82 FHLVTRRDIFLWNSIIKAHFSNGDYARSLCFFFSMLLSGQSPDHFTAPMVVSACAELLWF 141
Query: 164 RIGREIHCVIFR-TGYHQNLVIQTALVDFYAKKGEMLTARLLFDQIPLADLVSCNTLMAG 222
+G +H ++ + G+ +N + + V FY+K G + A L+FD++P D+V+ +++G
Sbjct: 142 HVGTFVHGLVLKHGGFDRNTAVGASFVYFYSKCGFLQDACLVFDEMPDRDVVAWTAIISG 201
Query: 223 YSFNGLDQEALETFRRILTVGL---KPNVSTFSSVIPVCTRLGHFCFGKSLHGFTIKSGY 279
+ NG + L ++ + G KPN T C+ LG G+ LHGF +K+G
Sbjct: 202 HVQNGESEGGLGYLCKMHSAGSDVDKPNPRTLECGFQACSNLGALKEGRCLHGFAVKNGL 261
Query: 280 LFDDFLVPALISMYAGDLDLSTARKLFDSLLEKNASVWNAMISAYTQSKKFFEAFEIFRQ 339
F+ ++ S Y+ + S A F L +++ W ++I++ +S E+F++F +
Sbjct: 262 ASSKFVQSSMFSFYSKSGNPSEAYLSFRELGDEDMFSWTSIIASLARSGDMEESFDMFWE 321
Query: 340 MIRAEMQPDLVTFVSIIPSCENYCSFQCGESLTACVIKNGLGNQPSVLTALLSMYAKLGN 399
M M PD V +I G++ VI++ +V +LLSMY K
Sbjct: 322 MQNKGMHPDGVVISCLINELGKMMLVPQGKAFHGFVIRHCFSLDSTVCNSLLSMYCKFEL 381
Query: 400 IDSAKFLFDQIPNR-NLLCWNAMMSAYVRNRFWDASLAVFRQMQFAGLNPDAVSIISVLS 458
+ A+ LF +I N WN M+ Y + + + +FR++Q G+ D+ S SV+S
Sbjct: 382 LSVAEKLFCRISEEGNKEAWNTMLKGYGKMKCHVKCIELFRKIQNLGIEIDSASATSVIS 441
Query: 459 GCSKLDDVLLGKSAHAFSLRKGIVSNLDVLNALLMFYSDGGQFSYAFTLFHRMSTRSSVS 518
CS + VLLGKS H + ++ + + V+N+L+ Y G + A+ +F T + ++
Sbjct: 442 SCSHIGAVLLGKSLHCYVVKTSLDLTISVVNSLIDLYGKMGDLTVAWRMFCEADT-NVIT 500
Query: 519 WNTLISRCVQNGAVEEAVILLQRMQKEGVELDMVTLISFLPNLNKNGNIKQGMVIHGYAI 578
WN +I+ V E+A+ L RM E + +TL++ L G++++G +IH Y
Sbjct: 501 WNAMIASYVHCEQSEKAIALFDRMVSENFKPSSITLVTLLMACVNTGSLERGQMIHRYIT 560
Query: 579 KTGCVADVTFLNALITMYCNCGSTNDGRLCLLLFQMGDKREISLWNAIISVYVQTNKAKQ 638
+T +++ ALI MY CG R LF G++++ WN +IS Y +
Sbjct: 561 ETEHEMNLSLSAALIDMYAKCGHLEKSR---ELFDAGNQKDAVCWNVMISGYGMHGDVES 617
Query: 639 AVAFFTELLGAGLEPDNVTVLSIIS----AGVLINSLNLTHSLMAFVIRKGLDKHVAVSN 694
A+A F ++ + ++P T L+++S AG++ L + + ++ L KH +
Sbjct: 618 AIALFDQMEESDVKPTGPTFLALLSACTHAGLVEQGKKLFLKMHQYDVKPNL-KHYS--- 673
Query: 695 ALMDSYVRCGNISMARKLFGSLIYK-DAFSWSVMINGYGLYGDGEAALELFKQMQLSGVR 753
L+D R GN+ A S+ + D W +++ +G+ E + + ++ S +
Sbjct: 674 CLVDLLSRSGNLEEAESTVMSMPFSPDGVIWGTLLSSCMTHGEFEMGIRMAERAVASDPQ 733
Query: 754 PNEITYLGVLSACSHAGLVEQSKMVFKSMVEHGISQKMEH 793
N+ Y+ + + S AG E+++ + M E G+ ++ H
Sbjct: 734 -NDGYYIMLANMYSAAGKWEEAERAREMMRESGVGKRAGH 772
>sp|Q9M9E2|PPR45_ARATH Pentatricopeptide repeat-containing protein At1g15510,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H73 PE=2
SV=1
Length = 866
Score = 363 bits (933), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 210/679 (30%), Positives = 362/679 (53%), Gaps = 6/679 (0%)
Query: 220 MAGYSFNGLDQEALETFRRILTVGLKPNVSTFSSVIPVCTRLGHFCFGKSLHGFTIKSGY 279
+ G NG +EA++ + + + + F +++ +C G ++ + S
Sbjct: 66 LHGLCANGKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMS 125
Query: 280 LFDDFLVPALISMYAGDLDLSTARKLFDSLLEKNASVWNAMISAYTQSKKFFEAFEIFRQ 339
L A ++M+ +L A +F + E+N WN ++ Y + F EA ++ +
Sbjct: 126 SLGVELGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHR 185
Query: 340 MIR-AEMQPDLVTFVSIIPSCENYCSFQCGESLTACVIKNGLGNQPSVLTALLSMYAKLG 398
M+ ++PD+ TF ++ +C G+ + V++ G V+ AL++MY K G
Sbjct: 186 MLWVGGVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCG 245
Query: 399 NIDSAKFLFDQIPNRNLLCWNAMMSAYVRNRFWDASLAVFRQMQFAGLNPDAVSIISVLS 458
++ SA+ LFD++P R+++ WNAM+S Y N L +F M+ ++PD +++ SV+S
Sbjct: 246 DVKSARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVIS 305
Query: 459 GCSKLDDVLLGKSAHAFSLRKGIVSNLDVLNALLMFYSDGGQFSYAFTLFHRMSTRSSVS 518
C L D LG+ HA+ + G ++ V N+L Y + G + A LF RM + VS
Sbjct: 306 ACELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVS 365
Query: 519 WNTLISRCVQNGAVEEAVILLQRMQKEGVELDMVTLISFLPNLNKNGNIKQGMVIHGYAI 578
W T+IS N ++A+ + M ++ V+ D +T+ + L G++ G+ +H AI
Sbjct: 366 WTTMISGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAI 425
Query: 579 KTGCVADVTFLNALITMYCNCGSTNDGRLCLLLFQMGDKREISLWNAIISVYVQTNKAKQ 638
K ++ V N LI MY C + L +F ++ + W +II+ N+ +
Sbjct: 426 KARLISYVIVANNLINMYSKCKCIDKA---LDIFHNIPRKNVISWTSIIAGLRLNNRCFE 482
Query: 639 AVAFFTELLGAGLEPDNVTVLSIISAGVLINSLNLTHSLMAFVIRKGLDKHVAVSNALMD 698
A+ F ++ L+P+ +T+ + ++A I +L + A V+R G+ + NAL+D
Sbjct: 483 ALIFLRQM-KMTLQPNAITLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLPNALLD 541
Query: 699 SYVRCGNISMARKLFGSLIYKDAFSWSVMINGYGLYGDGEAALELFKQMQLSGVRPNEIT 758
YVRCG ++ A F S KD SW++++ GY G G +ELF +M S VRP+EIT
Sbjct: 542 MYVRCGRMNTAWSQFNSQ-KKDVTSWNILLTGYSERGQGSMVVELFDRMVKSRVRPDEIT 600
Query: 759 YLGVLSACSHAGLVEQSKMVFKSMVEHGISQKMEHYACMVDLLGRTGHLNEAFIFVKKLP 818
++ +L CS + +V Q M F M ++G++ ++HYAC+VDLLGR G L EA F++K+P
Sbjct: 601 FISLLCGCSKSQMVRQGLMYFSKMEDYGVTPNLKHYACVVDLLGRAGELQEAHKFIQKMP 660
Query: 819 CKPSVSILESLLGACRIHGNVELGEIISGMLFEMDPENPGSYVMLHNIYASAGRWEDAYR 878
P ++ +LL ACRIH ++LGE+ + +FE+D ++ G Y++L N+YA G+W + +
Sbjct: 661 VTPDPAVWGALLNACRIHHKIDLGELSAQHIFELDKKSVGYYILLCNLYADCGKWREVAK 720
Query: 879 VRSCMKRSRLKKVPGFSLV 897
VR MK + L G S V
Sbjct: 721 VRRMMKENGLTVDAGCSWV 739
Score = 239 bits (610), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 159/589 (26%), Positives = 284/589 (48%), Gaps = 11/589 (1%)
Query: 146 DDFTFPFLIKACSSLSDLRIGREIHCVIFRTGYHQNLVIQTALVDFYAKKGEMLTARLLF 205
D+ F L++ C G +++ + + + + A + + + G ++ A +F
Sbjct: 93 DEDVFVALVRLCEWKRAQEEGSKVYSIALSSMSSLGVELGNAFLAMFVRFGNLVDAWYVF 152
Query: 206 DQIPLADLVSCNTLMAGYSFNGLDQEALETFRRILTV-GLKPNVSTFSSVIPVCTRLGHF 264
++ +L S N L+ GY+ G EA+ + R+L V G+KP+V TF V+ C +
Sbjct: 153 GKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGVKPDVYTFPCVLRTCGGIPDL 212
Query: 265 CFGKSLHGFTIKSGYLFDDFLVPALISMYAGDLDLSTARKLFDSLLEKNASVWNAMISAY 324
GK +H ++ GY D +V ALI+MY D+ +AR LFD + ++ WNAMIS Y
Sbjct: 213 ARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDRMPRRDIISWNAMISGY 272
Query: 325 TQSKKFFEAFEIFRQMIRAEMQPDLVTFVSIIPSCENYCSFQCGESLTACVIKNGLGNQP 384
++ E E+F M + PDL+T S+I +CE + G + A VI G
Sbjct: 273 FENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRDIHAYVITTGFAVDI 332
Query: 385 SVLTALLSMYAKLGNIDSAKFLFDQIPNRNLLCWNAMMSAYVRNRFWDASLAVFRQMQFA 444
SV +L MY G+ A+ LF ++ ++++ W M+S Y N D ++ +R M
Sbjct: 333 SVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGYEYNFLPDKAIDTYRMMDQD 392
Query: 445 GLNPDAVSIISVLSGCSKLDDVLLGKSAHAFSLRKGIVSNLDVLNALLMFYSDGGQFSYA 504
+ PD +++ +VLS C+ L D+ G H +++ ++S + V N L+ YS A
Sbjct: 393 SVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISYVIVANNLINMYSKCKCIDKA 452
Query: 505 FTLFHRMSTRSSVSWNTLISRCVQNGAVEEAVILLQRMQKEGVELDMVTLISFLPNLNKN 564
+FH + ++ +SW ++I+ N EA+I L++M K ++ + +TL + L +
Sbjct: 453 LDIFHNIPRKNVISWTSIIAGLRLNNRCFEALIFLRQM-KMTLQPNAITLTAALAACARI 511
Query: 565 GNIKQGMVIHGYAIKTGCVADVTFLNALITMYCNCGSTNDGRLCLLLFQMGDKREISLWN 624
G + G IH + ++TG D NAL+ MY CG N F K++++ WN
Sbjct: 512 GALMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRMNTA---WSQFN-SQKKDVTSWN 567
Query: 625 AIISVYVQTNKAKQAVAFFTELLGAGLEPDNVTVLSIISAGVLINSLNLTHSLMAFVIRK 684
+++ Y + + V F ++ + + PD +T +S++ S + LM F +
Sbjct: 568 ILLTGYSERGQGSMVVELFDRMVKSRVRPDEITFISLLCG--CSKSQMVRQGLMYFSKME 625
Query: 685 --GLDKHVAVSNALMDSYVRCGNISMARKLFGSL-IYKDAFSWSVMING 730
G+ ++ ++D R G + A K + + D W ++N
Sbjct: 626 DYGVTPNLKHYACVVDLLGRAGELQEAHKFIQKMPVTPDPAVWGALLNA 674
Score = 224 bits (570), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 139/463 (30%), Positives = 245/463 (52%), Gaps = 5/463 (1%)
Query: 112 VFLQNLMIRGLSNCGLHADLLHVYIK-CRLSGCPSDDFTFPFLIKACSSLSDLRIGREIH 170
+F N+++ G + G + + +Y + + G D +TFP +++ C + DL G+E+H
Sbjct: 160 LFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGVKPDVYTFPCVLRTCGGIPDLARGKEVH 219
Query: 171 CVIFRTGYHQNLVIQTALVDFYAKKGEMLTARLLFDQIPLADLVSCNTLMAGYSFNGLDQ 230
+ R GY ++ + AL+ Y K G++ +ARLLFD++P D++S N +++GY NG+
Sbjct: 220 VHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDRMPRRDIISWNAMISGYFENGMCH 279
Query: 231 EALETFRRILTVGLKPNVSTFSSVIPVCTRLGHFCFGKSLHGFTIKSGYLFDDFLVPALI 290
E LE F + + + P++ T +SVI C LG G+ +H + I +G+ D + +L
Sbjct: 280 EGLELFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRDIHAYVITTGFAVDISVCNSLT 339
Query: 291 SMYAGDLDLSTARKLFDSLLEKNASVWNAMISAYTQSKKFFEAFEIFRQMIRAEMQPDLV 350
MY A KLF + K+ W MIS Y + +A + +R M + ++PD +
Sbjct: 340 QMYLNAGSWREAEKLFSRMERKDIVSWTTMISGYEYNFLPDKAIDTYRMMDQDSVKPDEI 399
Query: 351 TFVSIIPSCENYCSFQCGESLTACVIKNGLGNQPSVLTALLSMYAKLGNIDSAKFLFDQI 410
T +++ +C G L IK L + V L++MY+K ID A +F I
Sbjct: 400 TVAAVLSACATLGDLDTGVELHKLAIKARLISYVIVANNLINMYSKCKCIDKALDIFHNI 459
Query: 411 PNRNLLCWNAMMSAY-VRNRFWDASLAVFRQMQFAGLNPDAVSIISVLSGCSKLDDVLLG 469
P +N++ W ++++ + NR ++A L RQM+ L P+A+++ + L+ C+++ ++ G
Sbjct: 460 PRKNVISWTSIIAGLRLNNRCFEA-LIFLRQMKMT-LQPNAITLTAALAACARIGALMCG 517
Query: 470 KSAHAFSLRKGIVSNLDVLNALLMFYSDGGQFSYAFTLFHRMSTRSSVSWNTLISRCVQN 529
K HA LR G+ + + NALL Y G+ + A++ F+ + SWN L++ +
Sbjct: 518 KEIHAHVLRTGVGLDDFLPNALLDMYVRCGRMNTAWSQFNS-QKKDVTSWNILLTGYSER 576
Query: 530 GAVEEAVILLQRMQKEGVELDMVTLISFLPNLNKNGNIKQGMV 572
G V L RM K V D +T IS L +K+ ++QG++
Sbjct: 577 GQGSMVVELFDRMVKSRVRPDEITFISLLCGCSKSQMVRQGLM 619
>sp|Q9XE98|PP303_ARATH Pentatricopeptide repeat-containing protein At4g04370
OS=Arabidopsis thaliana GN=PCMP-E99 PE=3 SV=1
Length = 729
Score = 363 bits (932), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 210/683 (30%), Positives = 364/683 (53%), Gaps = 8/683 (1%)
Query: 217 NTLMAGYSFNGLDQEALETFRRILTVGLKPNVSTFSSVIPVCTRLGHFCFGKSLHGFTIK 276
N+ + S +G ++ L TF +L L P+ TF S++ C L FG S+H +
Sbjct: 15 NSHINHLSSHGDHKQVLSTFSSMLANKLLPDTFTFPSLLKACASLQRLSFGLSIHQQVLV 74
Query: 277 SGYLFDDFLVPALISMYAGDLDLSTARKLFDSLLEKNASVWNAMISAYTQSKKFFEAFEI 336
+G+ D ++ +L+++YA L+ ARK+F+ + E++ W AMI Y+++ EA +
Sbjct: 75 NGFSSDFYISSSLVNLYAKFGLLAHARKVFEEMRERDVVHWTAMIGCYSRAGIVGEACSL 134
Query: 337 FRQMIRAEMQPDLVTFVSIIPSCENYCSFQCGESLTACVIKNGLGNQPSVLTALLSMYAK 396
+M ++P VT + ++ QC L + G +V+ ++L++Y K
Sbjct: 135 VNEMRFQGIKPGPVTLLEMLSGVLEITQLQC---LHDFAVIYGFDCDIAVMNSMLNLYCK 191
Query: 397 LGNIDSAKFLFDQIPNRNLLCWNAMMSAYVRNRFWDASLAVFRQMQFAGLNPDAVSIISV 456
++ AK LFDQ+ R+++ WN M+S Y L + +M+ GL PD + +
Sbjct: 192 CDHVGDAKDLFDQMEQRDMVSWNTMISGYASVGNMSEILKLLYRMRGDGLRPDQQTFGAS 251
Query: 457 LSGCSKLDDVLLGKSAHAFSLRKGIVSNLDVLNALLMFYSDGGQFSYAFTLFHRMSTRSS 516
LS + D+ +G+ H ++ G ++ + AL+ Y G+ ++ + + +
Sbjct: 252 LSVSGTMCDLEMGRMLHCQIVKTGFDVDMHLKTALITMYLKCGKEEASYRVLETIPNKDV 311
Query: 517 VSWNTLISRCVQNGAVEEAVILLQRMQKEGVELDMVTLISFLPNLNKNGNIKQGMVIHGY 576
V W +IS ++ G E+A+I+ M + G +L + S + + + G+ G +HGY
Sbjct: 312 VCWTVMISGLMRLGRAEKALIVFSEMLQSGSDLSSEAIASVVASCAQLGSFDLGASVHGY 371
Query: 577 AIKTGCVADVTFLNALITMYCNCGSTNDGRLCLLLFQMGDKREISLWNAIISVYVQTNKA 636
++ G D LN+LITMY CG + L++F+ ++R++ WNAIIS Y Q
Sbjct: 372 VLRHGYTLDTPALNSLITMYAKCGHLDKS---LVIFERMNERDLVSWNAIISGYAQNVDL 428
Query: 637 KQAVAFFTELLGAGLEP-DNVTVLSIISAGVLINSLNLTHSLMAFVIRKGLDKHVAVSNA 695
+A+ F E+ ++ D+ TV+S++ A +L + + VIR + V A
Sbjct: 429 CKALLLFEEMKFKTVQQVDSFTVVSLLQACSSAGALPVGKLIHCIVIRSFIRPCSLVDTA 488
Query: 696 LMDSYVRCGNISMARKLFGSLIYKDAFSWSVMINGYGLYGDGEAALELFKQMQLSGVRPN 755
L+D Y +CG + A++ F S+ +KD SW ++I GYG +G G+ ALE++ + SG+ PN
Sbjct: 489 LVDMYSKCGYLEAAQRCFDSISWKDVVSWGILIAGYGFHGKGDIALEIYSEFLHSGMEPN 548
Query: 756 EITYLGVLSACSHAGLVEQSKMVFKSMV-EHGISQKMEHYACMVDLLGRTGHLNEAFIFV 814
+ +L VLS+CSH G+V+Q +F SMV + G+ EH AC+VDLL R + +AF F
Sbjct: 549 HVIFLAVLSSCSHNGMVQQGLKIFSSMVRDFGVEPNHEHLACVVDLLCRAKRIEDAFKFY 608
Query: 815 KKLPCKPSVSILESLLGACRIHGNVELGEIISGMLFEMDPENPGSYVMLHNIYASAGRWE 874
K+ +PS+ +L +L ACR +G E+ +II + E+ P + G YV L + +A+ RW+
Sbjct: 609 KENFTRPSIDVLGIILDACRANGKTEVEDIICEDMIELKPGDAGHYVKLGHSFAAMKRWD 668
Query: 875 DAYRVRSCMKRSRLKKVPGFSLV 897
D + M+ LKK+PG+S +
Sbjct: 669 DVSESWNQMRSLGLKKLPGWSKI 691
Score = 248 bits (633), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 154/550 (28%), Positives = 274/550 (49%), Gaps = 7/550 (1%)
Query: 116 NLMIRGLSNCGLHADLLHVYIKCRLSGCPSDDFTFPFLIKACSSLSDLRIGREIHCVIFR 175
N I LS+ G H +L + + D FTFP L+KAC+SL L G IH +
Sbjct: 15 NSHINHLSSHGDHKQVLSTFSSMLANKLLPDTFTFPSLLKACASLQRLSFGLSIHQQVLV 74
Query: 176 TGYHQNLVIQTALVDFYAKKGEMLTARLLFDQIPLADLVSCNTLMAGYSFNGLDQEALET 235
G+ + I ++LV+ YAK G + AR +F+++ D+V ++ YS G+ EA
Sbjct: 75 NGFSSDFYISSSLVNLYAKFGLLAHARKVFEEMRERDVVHWTAMIGCYSRAGIVGEACSL 134
Query: 236 FRRILTVGLKPNVSTFSSVIPVCTRLGHFCFGKSLHGFTIKSGYLFDDFLVPALISMYAG 295
+ G+KP T ++ + + LH F + G+ D ++ +++++Y
Sbjct: 135 VNEMRFQGIKPGPVTLLEMLSGVLEITQL---QCLHDFAVIYGFDCDIAVMNSMLNLYCK 191
Query: 296 DLDLSTARKLFDSLLEKNASVWNAMISAYTQSKKFFEAFEIFRQMIRAEMQPDLVTFVSI 355
+ A+ LFD + +++ WN MIS Y E ++ +M ++PD TF +
Sbjct: 192 CDHVGDAKDLFDQMEQRDMVSWNTMISGYASVGNMSEILKLLYRMRGDGLRPDQQTFGAS 251
Query: 356 IPSCENYCSFQCGESLTACVIKNGLGNQPSVLTALLSMYAKLGNIDSAKFLFDQIPNRNL 415
+ C + G L ++K G + TAL++MY K G +++ + + IPN+++
Sbjct: 252 LSVSGTMCDLEMGRMLHCQIVKTGFDVDMHLKTALITMYLKCGKEEASYRVLETIPNKDV 311
Query: 416 LCWNAMMSAYVRNRFWDASLAVFRQMQFAGLNPDAVSIISVLSGCSKLDDVLLGKSAHAF 475
+CW M+S +R + +L VF +M +G + + +I SV++ C++L LG S H +
Sbjct: 312 VCWTVMISGLMRLGRAEKALIVFSEMLQSGSDLSSEAIASVVASCAQLGSFDLGASVHGY 371
Query: 476 SLRKGIVSNLDVLNALLMFYSDGGQFSYAFTLFHRMSTRSSVSWNTLISRCVQNGAVEEA 535
LR G + LN+L+ Y+ G + +F RM+ R VSWN +IS QN + +A
Sbjct: 372 VLRHGYTLDTPALNSLITMYAKCGHLDKSLVIFERMNERDLVSWNAIISGYAQNVDLCKA 431
Query: 536 VILLQRMQKEGV-ELDMVTLISFLPNLNKNGNIKQGMVIHGYAIKTGCVADVTFLNALIT 594
++L + M+ + V ++D T++S L + G + G +IH I++ AL+
Sbjct: 432 LLLFEEMKFKTVQQVDSFTVVSLLQACSSAGALPVGKLIHCIVIRSFIRPCSLVDTALVD 491
Query: 595 MYCNCGSTNDGRLCLLLFQMGDKREISLWNAIISVYVQTNKAKQAVAFFTELLGAGLEPD 654
MY CG + C F +++ W +I+ Y K A+ ++E L +G+EP+
Sbjct: 492 MYSKCGYLEAAQRC---FDSISWKDVVSWGILIAGYGFHGKGDIALEIYSEFLHSGMEPN 548
Query: 655 NVTVLSIISA 664
+V L+++S+
Sbjct: 549 HVIFLAVLSS 558
Score = 203 bits (516), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 141/543 (25%), Positives = 268/543 (49%), Gaps = 10/543 (1%)
Query: 317 WNAMISAYTQSKKFFEAFEIFRQMIRAEMQPDLVTFVSIIPSCENYCSFQCGESLTACVI 376
+N+ I+ + + F M+ ++ PD TF S++ +C + G S+ V+
Sbjct: 14 FNSHINHLSSHGDHKQVLSTFSSMLANKLLPDTFTFPSLLKACASLQRLSFGLSIHQQVL 73
Query: 377 KNGLGNQPSVLTALLSMYAKLGNIDSAKFLFDQIPNRNLLCWNAMMSAYVRNRFWDASLA 436
NG + + ++L+++YAK G + A+ +F+++ R+++ W AM+ Y R + +
Sbjct: 74 VNGFSSDFYISSSLVNLYAKFGLLAHARKVFEEMRERDVVHWTAMIGCYSRAGIVGEACS 133
Query: 437 VFRQMQFAGLNPDAVSIISVLSGCSKLDDVLLGKSAHAFSLRKGIVSNLDVLNALLMFYS 496
+ +M+F G+ P V+++ +LSG ++ + + H F++ G ++ V+N++L Y
Sbjct: 134 LVNEMRFQGIKPGPVTLLEMLSGVLEITQL---QCLHDFAVIYGFDCDIAVMNSMLNLYC 190
Query: 497 DGGQFSYAFTLFHRMSTRSSVSWNTLISRCVQNGAVEEAVILLQRMQKEGVELDMVTLIS 556
A LF +M R VSWNT+IS G + E + LL RM+ +G+ D T +
Sbjct: 191 KCDHVGDAKDLFDQMEQRDMVSWNTMISGYASVGNMSEILKLLYRMRGDGLRPDQQTFGA 250
Query: 557 FLPNLNKNGNIKQGMVIHGYAIKTGCVADVTFLNALITMYCNCGSTNDGRLCLLLFQMGD 616
L +++ G ++H +KTG D+ ALITMY CG L +
Sbjct: 251 SLSVSGTMCDLEMGRMLHCQIVKTGFDVDMHLKTALITMYLKCGKEEASYRVL---ETIP 307
Query: 617 KREISLWNAIISVYVQTNKAKQAVAFFTELLGAGLEPDNVTVLSIISAGVLINSLNLTHS 676
+++ W +IS ++ +A++A+ F+E+L +G + + + S++++ + S +L S
Sbjct: 308 NKDVVCWTVMISGLMRLGRAEKALIVFSEMLQSGSDLSSEAIASVVASCAQLGSFDLGAS 367
Query: 677 LMAFVIRKGLDKHVAVSNALMDSYVRCGNISMARKLFGSLIYKDAFSWSVMINGYGLYGD 736
+ +V+R G N+L+ Y +CG++ + +F + +D SW+ +I+GY D
Sbjct: 368 VHGYVLRHGYTLDTPALNSLITMYAKCGHLDKSLVIFERMNERDLVSWNAIISGYAQNVD 427
Query: 737 GEAALELFKQMQLSGVRP-NEITYLGVLSACSHAGLVEQSKMVFKSMVEHGISQKMEHYA 795
AL LF++M+ V+ + T + +L ACS AG + K++ ++ I
Sbjct: 428 LCKALLLFEEMKFKTVQQVDSFTVVSLLQACSSAGALPVGKLIHCIVIRSFIRPCSLVDT 487
Query: 796 CMVDLLGRTGHLNEAFIFVKKLPCKPSVSILESLLGACRIHGNVELG-EIISGMLFE-MD 853
+VD+ + G+L A + K VS L+ HG ++ EI S L M+
Sbjct: 488 ALVDMYSKCGYLEAAQRCFDSISWKDVVS-WGILIAGYGFHGKGDIALEIYSEFLHSGME 546
Query: 854 PEN 856
P +
Sbjct: 547 PNH 549
Score = 88.2 bits (217), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 46/117 (39%), Positives = 67/117 (57%)
Query: 146 DDFTFPFLIKACSSLSDLRIGREIHCVIFRTGYHQNLVIQTALVDFYAKKGEMLTARLLF 205
D FT L++ACSS L +G+ IHC++ R+ ++ TALVD Y+K G + A+ F
Sbjct: 447 DSFTVVSLLQACSSAGALPVGKLIHCIVIRSFIRPCSLVDTALVDMYSKCGYLEAAQRCF 506
Query: 206 DQIPLADLVSCNTLMAGYSFNGLDQEALETFRRILTVGLKPNVSTFSSVIPVCTRLG 262
D I D+VS L+AGY F+G ALE + L G++PN F +V+ C+ G
Sbjct: 507 DSISWKDVVSWGILIAGYGFHGKGDIALEIYSEFLHSGMEPNHVIFLAVLSSCSHNG 563
>sp|Q9SS97|PP205_ARATH Putative pentatricopeptide repeat-containing protein At3g01580
OS=Arabidopsis thaliana GN=PCMP-E87 PE=3 SV=2
Length = 660
Score = 360 bits (924), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 193/601 (32%), Positives = 340/601 (56%), Gaps = 8/601 (1%)
Query: 302 ARKLFDSLLEKNASVWNAMISAYTQSKKFFEAFEIFRQMIRAEMQPDLVTFVSIIPSCEN 361
AR++F + +++ WN ++ + ++ K++ E F M R E +PD T + +C
Sbjct: 13 ARQMFGEMTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPVALKACGE 72
Query: 362 YCSFQCGESLTACVIKN-GLGNQPSVLTALLSMYAKLGNIDSAKFLFDQIPNRNLLCWNA 420
GE + V K+ LG+ V ++L+ MY K G + A +FD++ +++ W++
Sbjct: 73 LREVNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKPDIVTWSS 132
Query: 421 MMSAYVRNRFWDASLAVFRQMQFAG-LNPDAVSIISVLSGCSKLDDVLLGKSAHAFSLRK 479
M+S + +N ++ FR+M A + PD V++I+++S C+KL + LG+ H F +R+
Sbjct: 133 MVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVIRR 192
Query: 480 GIVSNLDVLNALLMFYSDGGQFSYAFTLFHRMSTRSSVSWNTLISRCVQNGAVEEAVILL 539
G ++L ++N+LL Y+ F A LF ++ + +SW+T+I+ VQNGA EA+++
Sbjct: 193 GFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAAAEALLVF 252
Query: 540 QRMQKEGVELDMVTLISFLPNLNKNGNIKQGMVIHGYAIKTGCVADVTFLNALITMYCNC 599
M +G E ++ T++ L +++QG H AI+ G +V AL+ MY C
Sbjct: 253 NDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKVSTALVDMYMKC 312
Query: 600 GSTNDGRLCLLLFQMGDKREISLWNAIISVYVQTNKAKQAVAFFT-ELLGAGLEPDNVTV 658
S + +F ++++ W A+IS + A +++ F+ LL PD + +
Sbjct: 313 FSPEEA---YAVFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAILM 369
Query: 659 LSIISAGVLINSLNLTHSLMAFVIRKGLDKHVAVSNALMDSYVRCGNISMARKLFGSLIY 718
+ ++ + + L ++VI+ G D + + +L++ Y RCG++ A K+F +
Sbjct: 370 VKVLGSCSELGFLEQAKCFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVFNGIAL 429
Query: 719 KDAFSWSVMINGYGLYGDGEAALELFKQM-QLSGVRPNEITYLGVLSACSHAGLVEQSKM 777
KD W+ +I GYG++G G ALE F M + S V+PNE+T+L +LSACSHAGL+ +
Sbjct: 430 KDTVVWTSLITGYGIHGKGTKALETFNHMVKSSEVKPNEVTFLSILSACSHAGLIHEGLR 489
Query: 778 VFKSMV-EHGISQKMEHYACMVDLLGRTGHLNEAFIFVKKLPCKPSVSILESLLGACRIH 836
+FK MV ++ ++ +EHYA +VDLLGR G L+ A K++P P+ IL +LLGACRIH
Sbjct: 490 IFKLMVNDYRLAPNLEHYAVLVDLLGRVGDLDTAIEITKRMPFSPTPQILGTLLGACRIH 549
Query: 837 GNVELGEIISGMLFEMDPENPGSYVMLHNIYASAGRWEDAYRVRSCMKRSRLKKVPGFSL 896
N E+ E ++ LFE++ + G Y+++ N+Y G WE+ ++R+ +K+ +KK SL
Sbjct: 550 QNGEMAETVAKKLFELESNHAGYYMLMSNVYGVKGEWENVEKLRNSVKQRGIKKGLAESL 609
Query: 897 V 897
+
Sbjct: 610 I 610
Score = 199 bits (506), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 157/615 (25%), Positives = 285/615 (46%), Gaps = 47/615 (7%)
Query: 199 LTARLLFDQIPLADLVSCNTLMAGYSFNGLDQEALETFRRILTVGLKPNVSTFSSVIPVC 258
+ AR +F ++ L NTL+ S +E L F + KP+ T + C
Sbjct: 11 VDARQMFGEMTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPVALKAC 70
Query: 259 TRLGHFCFGKSLHGFTIKSGYLFDDFLV-PALISMYAGDLDLSTARKLFDSLLEKNASVW 317
L +G+ +HGF K L D V +LI MY + A ++FD L + + W
Sbjct: 71 GELREVNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKPDIVTW 130
Query: 318 NAMISAYTQSKKFFEAFEIFRQMIRA-EMQPDLVTFVSIIPSCENYCSFQCGESLTACVI 376
++M+S + ++ ++A E FR+M+ A ++ PD VT ++++ +C + + G + VI
Sbjct: 131 SSMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVI 190
Query: 377 KNGLGNQPSVLTALLSMYAKLGNIDSAKFLFDQIPNRNLLCWNAMMSAYVRNRFWDASLA 436
+ G N S++ +LL+ YAK A LF I ++++ W+ +++ YV+N +L
Sbjct: 191 RRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAAAEALL 250
Query: 437 VFRQMQFAGLNPDAVSIISVLSGCSKLDDVLLGKSAHAFSLRKGIVSNLDVLNALLMFYS 496
VF M G P+ +++ VL C+ D+ G+ H ++RKG+ + + V AL+ Y
Sbjct: 251 VFNDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKVSTALVDMYM 310
Query: 497 DGGQFSYAFTLFHRMSTRSSVSWNTLISRCVQNG----AVEEAVILLQRMQKEGVELDMV 552
A+ +F R+ + VSW LIS NG ++EE I+L + D +
Sbjct: 311 KCFSPEEAYAVFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIML---LENNTRPDAI 367
Query: 553 TLISFLPNLNKNGNIKQGMVIHGYAIKTGCVADVTFLNALITMYCNCGSTNDGRLCLLLF 612
++ L + ++ G ++Q H Y IK G ++ +L+ +Y CGS + +F
Sbjct: 368 LMVKVLGSCSELGFLEQAKCFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNAS---KVF 424
Query: 613 QMGDKREISLWNAIISVYVQTNKAKQAVAFFTELLGAG-LEPDNVTVLSIISAGVLINSL 671
++ +W ++I+ Y K +A+ F ++ + ++P+ VT LSI+SA
Sbjct: 425 NGIALKDTVVWTSLITGYGIHGKGTKALETFNHMVKSSEVKPNEVTFLSILSA------- 477
Query: 672 NLTHSLMAFVIRKGLDKHVAVSNALMDSYVRCGNISMARKLFGSLIYKDAFSWSVMINGY 731
+H A +I +GL + +++ Y N+ ++V+++
Sbjct: 478 -CSH---AGLIHEGL----RIFKLMVNDYRLAPNLE---------------HYAVLVDLL 514
Query: 732 GLYGDGEAALELFKQMQLSGVRPNEITYLGVLSACSHAGLVEQSKMVFKSMVEHGISQKM 791
G GD + A+E+ K+M S P +L AC E ++ V K + E S
Sbjct: 515 GRVGDLDTAIEITKRMPFS---PTPQILGTLLGACRIHQNGEMAETVAKKLFELE-SNHA 570
Query: 792 EHYACMVDLLGRTGH 806
+Y M ++ G G
Sbjct: 571 GYYMLMSNVYGVKGE 585
Score = 198 bits (504), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 128/478 (26%), Positives = 239/478 (50%), Gaps = 4/478 (0%)
Query: 100 ALSSFPIIKKPCVFLQNLMIRGLSNCGLHADLLHVYIKCRLSGCPSDDFTFPFLIKACSS 159
A F + K ++ N +++ LS ++L+ + D+FT P +KAC
Sbjct: 13 ARQMFGEMTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPVALKACGE 72
Query: 160 LSDLRIGREIHCVIFR-TGYHQNLVIQTALVDFYAKKGEMLTARLLFDQIPLADLVSCNT 218
L ++ G IH + + +L + ++L+ Y K G M+ A +FD++ D+V+ ++
Sbjct: 73 LREVNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKPDIVTWSS 132
Query: 219 LMAGYSFNGLDQEALETFRR-ILTVGLKPNVSTFSSVIPVCTRLGHFCFGKSLHGFTIKS 277
+++G+ NG +A+E FRR ++ + P+ T +++ CT+L + G+ +HGF I+
Sbjct: 133 MVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVIRR 192
Query: 278 GYLFDDFLVPALISMYAGDLDLSTARKLFDSLLEKNASVWNAMISAYTQSKKFFEAFEIF 337
G+ D LV +L++ YA A LF + EK+ W+ +I+ Y Q+ EA +F
Sbjct: 193 GFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAAAEALLVF 252
Query: 338 RQMIRAEMQPDLVTFVSIIPSCENYCSFQCGESLTACVIKNGLGNQPSVLTALLSMYAKL 397
M+ +P++ T + ++ +C + G I+ GL + V TAL+ MY K
Sbjct: 253 NDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKVSTALVDMYMKC 312
Query: 398 GNIDSAKFLFDQIPNRNLLCWNAMMSAYVRNRFWDASLAVFRQMQFA-GLNPDAVSIISV 456
+ + A +F +IP ++++ W A++S + N S+ F M PDA+ ++ V
Sbjct: 313 FSPEEAYAVFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAILMVKV 372
Query: 457 LSGCSKLDDVLLGKSAHAFSLRKGIVSNLDVLNALLMFYSDGGQFSYAFTLFHRMSTRSS 516
L CS+L + K H++ ++ G SN + +L+ YS G A +F+ ++ + +
Sbjct: 373 LGSCSELGFLEQAKCFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVFNGIALKDT 432
Query: 517 VSWNTLISRCVQNGAVEEAVILLQRMQKEG-VELDMVTLISFLPNLNKNGNIKQGMVI 573
V W +LI+ +G +A+ M K V+ + VT +S L + G I +G+ I
Sbjct: 433 VVWTSLITGYGIHGKGTKALETFNHMVKSSEVKPNEVTFLSILSACSHAGLIHEGLRI 490
Score = 148 bits (374), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 114/446 (25%), Positives = 203/446 (45%), Gaps = 11/446 (2%)
Query: 100 ALSSFPIIKKPCVFLQNLMIRGLSNCGLHADLLHVYIKCRL-SGCPSDDFTFPFLIKACS 158
AL F ++KP + + M+ G G + + + + S D T L+ AC+
Sbjct: 115 ALRMFDELEKPDIVTWSSMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACT 174
Query: 159 SLSDLRIGREIHCVIFRTGYHQNLVIQTALVDFYAKKGEMLTARLLFDQIPLADLVSCNT 218
LS+ R+GR +H + R G+ +L + +L++ YAK A LF I D++S +T
Sbjct: 175 KLSNSRLGRCVHGFVIRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWST 234
Query: 219 LMAGYSFNGLDQEALETFRRILTVGLKPNVSTFSSVIPVCTRLGHFCFGKSLHGFTIKSG 278
++A Y NG EAL F ++ G +PNV+T V+ C G+ H I+ G
Sbjct: 235 VIACYVQNGAAAEALLVFNDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKG 294
Query: 279 YLFDDFLVPALISMYAGDLDLSTARKLFDSLLEKNASVWNAMISAYTQSKKFFEAFEIFR 338
+ + AL+ MY A +F + K+ W A+IS +T + + E F
Sbjct: 295 LETEVKVSTALVDMYMKCFSPEEAYAVFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFS 354
Query: 339 QM-IRAEMQPDLVTFVSIIPSCENYCSFQCGESLTACVIKNGLGNQPSVLTALLSMYAKL 397
M + +PD + V ++ SC + + + VIK G + P + +L+ +Y++
Sbjct: 355 IMLLENNTRPDAILMVKVLGSCSELGFLEQAKCFHSYVIKYGFDSNPFIGASLVELYSRC 414
Query: 398 GNIDSAKFLFDQIPNRNLLCWNAMMSAYVRNRFWDASLAVFRQM-QFAGLNPDAVSIISV 456
G++ +A +F+ I ++ + W ++++ Y + +L F M + + + P+ V+ +S+
Sbjct: 415 GSLGNASKVFNGIALKDTVVWTSLITGYGIHGKGTKALETFNHMVKSSEVKPNEVTFLSI 474
Query: 457 LSGCSKLDDVLLGKSAHAFSLRKG---IVSNLDVLNALLMFYSDGGQFSYAFTLFHRMS- 512
LS CS L+ + F L + NL+ L+ G A + RM
Sbjct: 475 LSACSHAG--LIHEGLRIFKLMVNDYRLAPNLEHYAVLVDLLGRVGDLDTAIEITKRMPF 532
Query: 513 TRSSVSWNTLISRCV--QNGAVEEAV 536
+ + TL+ C QNG + E V
Sbjct: 533 SPTPQILGTLLGACRIHQNGEMAETV 558
>sp|Q9LTV8|PP224_ARATH Pentatricopeptide repeat-containing protein At3g12770
OS=Arabidopsis thaliana GN=PCMP-H43 PE=2 SV=1
Length = 694
Score = 353 bits (907), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 182/514 (35%), Positives = 289/514 (56%), Gaps = 5/514 (0%)
Query: 386 VLTALLSMYAKLGNIDSAKFLFDQIPNRNLLCWNAMMSAYVRNRFWDASLAVFRQMQFAG 445
++T L+ + G+I A+ +FD +P + WNA++ Y RN + +L ++ MQ A
Sbjct: 55 LITKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLAR 114
Query: 446 LNPDAVSIISVLSGCSKLDDVLLGKSAHAFSLRKGIVSNLDVLNALLMFYSDGGQFSYAF 505
++PD+ + +L CS L + +G+ HA R G +++ V N L+ Y+ + A
Sbjct: 115 VSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSAR 174
Query: 506 TLFH--RMSTRSSVSWNTLISRCVQNGAVEEAVILLQRMQKEGVELDMVTLISFLPNLNK 563
T+F + R+ VSW ++S QNG EA+ + +M+K V+ D V L+S L
Sbjct: 175 TVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTC 234
Query: 564 NGNIKQGMVIHGYAIKTGCVADVTFLNALITMYCNCGSTNDGRLCLLLFQMGDKREISLW 623
++KQG IH +K G + L +L TMY CG ++ LF + LW
Sbjct: 235 LQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKI---LFDKMKSPNLILW 291
Query: 624 NAIISVYVQTNKAKQAVAFFTELLGAGLEPDNVTVLSIISAGVLINSLNLTHSLMAFVIR 683
NA+IS Y + A++A+ F E++ + PD +++ S ISA + SL S+ +V R
Sbjct: 292 NAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGR 351
Query: 684 KGLDKHVAVSNALMDSYVRCGNISMARKLFGSLIYKDAFSWSVMINGYGLYGDGEAALEL 743
V +S+AL+D + +CG++ AR +F + +D WS MI GYGL+G A+ L
Sbjct: 352 SDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISL 411
Query: 744 FKQMQLSGVRPNEITYLGVLSACSHAGLVEQSKMVFKSMVEHGISQKMEHYACMVDLLGR 803
++ M+ GV PN++T+LG+L AC+H+G+V + F M +H I+ + +HYAC++DLLGR
Sbjct: 412 YRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNRMADHKINPQQQHYACVIDLLGR 471
Query: 804 TGHLNEAFIFVKKLPCKPSVSILESLLGACRIHGNVELGEIISGMLFEMDPENPGSYVML 863
GHL++A+ +K +P +P V++ +LL AC+ H +VELGE + LF +DP N G YV L
Sbjct: 472 AGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRHVELGEYAAQQLFSIDPSNTGHYVQL 531
Query: 864 HNIYASAGRWEDAYRVRSCMKRSRLKKVPGFSLV 897
N+YA+A W+ VR MK L K G S V
Sbjct: 532 SNLYAAARLWDRVAEVRVRMKEKGLNKDVGCSWV 565
Score = 219 bits (558), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 144/498 (28%), Positives = 248/498 (49%), Gaps = 19/498 (3%)
Query: 50 SSLHSEVRAFLDLYNSYLKLKIHNKNLKALPLPALALR-TLEAFEITSYHIALSSFPII- 107
S +HS+ Y S + H LK + L L F IT A SSF I
Sbjct: 16 SGIHSD-----SFYASLIDSATHKAQLKQIHARLLVLGLQFSGFLITKLIHASSSFGDIT 70
Query: 108 ---------KKPCVFLQNLMIRGLSNCGLHADLLHVYIKCRLSGCPSDDFTFPFLIKACS 158
+P +F N +IRG S D L +Y +L+ D FTFP L+KACS
Sbjct: 71 FARQVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACS 130
Query: 159 SLSDLRIGREIHCVIFRTGYHQNLVIQTALVDFYAKKGEMLTARLLFDQIPLAD--LVSC 216
LS L++GR +H +FR G+ ++ +Q L+ YAK + +AR +F+ +PL + +VS
Sbjct: 131 GLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSW 190
Query: 217 NTLMAGYSFNGLDQEALETFRRILTVGLKPNVSTFSSVIPVCTRLGHFCFGKSLHGFTIK 276
+++ Y+ NG EALE F ++ + +KP+ SV+ T L G+S+H +K
Sbjct: 191 TAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVK 250
Query: 277 SGYLFDDFLVPALISMYAGDLDLSTARKLFDSLLEKNASVWNAMISAYTQSKKFFEAFEI 336
G + L+ +L +MYA ++TA+ LFD + N +WNAMIS Y ++ EA ++
Sbjct: 251 MGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDM 310
Query: 337 FRQMIRAEMQPDLVTFVSIIPSCENYCSFQCGESLTACVIKNGLGNQPSVLTALLSMYAK 396
F +MI +++PD ++ S I +C S + S+ V ++ + + +AL+ M+AK
Sbjct: 311 FHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAK 370
Query: 397 LGNIDSAKFLFDQIPNRNLLCWNAMMSAYVRNRFWDASLAVFRQMQFAGLNPDAVSIISV 456
G+++ A+ +FD+ +R+++ W+AM+ Y + +++++R M+ G++P+ V+ + +
Sbjct: 371 CGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGL 430
Query: 457 LSGCSKLDDVLLGKSAHAFSLRKGIVSNLDVLNALLMFYSDGGQFSYAFTLFHRMSTRSS 516
L C+ V G I ++ G A+ + M +
Sbjct: 431 LMACNHSGMVREGWWFFNRMADHKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPG 490
Query: 517 VS-WNTLISRCVQNGAVE 533
V+ W L+S C ++ VE
Sbjct: 491 VTVWGALLSACKKHRHVE 508
Score = 216 bits (551), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 129/432 (29%), Positives = 228/432 (52%), Gaps = 6/432 (1%)
Query: 141 SGCPSDDFTFPFLIKACSSLSDLRIGREIHCVIFRTGYHQNLVIQTALVDFYAKKGEMLT 200
SG SD F + LI + + + L+ +IH + G + + T L+ + G++
Sbjct: 16 SGIHSDSF-YASLIDSATHKAQLK---QIHARLLVLGLQFSGFLITKLIHASSSFGDITF 71
Query: 201 ARLLFDQIPLADLVSCNTLMAGYSFNGLDQEALETFRRILTVGLKPNVSTFSSVIPVCTR 260
AR +FD +P + N ++ GYS N Q+AL + + + P+ TF ++ C+
Sbjct: 72 ARQVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSG 131
Query: 261 LGHFCFGKSLHGFTIKSGYLFDDFLVPALISMYAGDLDLSTARKLFDSLL--EKNASVWN 318
L H G+ +H + G+ D F+ LI++YA L +AR +F+ L E+ W
Sbjct: 132 LSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWT 191
Query: 319 AMISAYTQSKKFFEAFEIFRQMIRAEMQPDLVTFVSIIPSCENYCSFQCGESLTACVIKN 378
A++SAY Q+ + EA EIF QM + +++PD V VS++ + + G S+ A V+K
Sbjct: 192 AIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKM 251
Query: 379 GLGNQPSVLTALLSMYAKLGNIDSAKFLFDQIPNRNLLCWNAMMSAYVRNRFWDASLAVF 438
GL +P +L +L +MYAK G + +AK LFD++ + NL+ WNAM+S Y +N + ++ +F
Sbjct: 252 GLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMF 311
Query: 439 RQMQFAGLNPDAVSIISVLSGCSKLDDVLLGKSAHAFSLRKGIVSNLDVLNALLMFYSDG 498
+M + PD +SI S +S C+++ + +S + + R ++ + +AL+ ++
Sbjct: 312 HEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKC 371
Query: 499 GQFSYAFTLFHRMSTRSSVSWNTLISRCVQNGAVEEAVILLQRMQKEGVELDMVTLISFL 558
G A +F R R V W+ +I +G EA+ L + M++ GV + VT + L
Sbjct: 372 GSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLL 431
Query: 559 PNLNKNGNIKQG 570
N +G +++G
Sbjct: 432 MACNHSGMVREG 443
Score = 138 bits (348), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 82/332 (24%), Positives = 164/332 (49%), Gaps = 3/332 (0%)
Query: 118 MIRGLSNCGLHADLLHVYIKCRLSGCPSDDFTFPFLIKACSSLSDLRIGREIHCVIFRTG 177
++ + G + L ++ + R D ++ A + L DL+ GR IH + + G
Sbjct: 193 IVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMG 252
Query: 178 YHQNLVIQTALVDFYAKKGEMLTARLLFDQIPLADLVSCNTLMAGYSFNGLDQEALETFR 237
+ +L YAK G++ TA++LFD++ +L+ N +++GY+ NG +EA++ F
Sbjct: 253 LEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFH 312
Query: 238 RILTVGLKPNVSTFSSVIPVCTRLGHFCFGKSLHGFTIKSGYLFDDFLVPALISMYAGDL 297
++ ++P+ + +S I C ++G +S++ + +S Y D F+ ALI M+A
Sbjct: 313 EMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCG 372
Query: 298 DLSTARKLFDSLLEKNASVWNAMISAYTQSKKFFEAFEIFRQMIRAEMQPDLVTFVSIIP 357
+ AR +FD L+++ VW+AMI Y + EA ++R M R + P+ VTF+ ++
Sbjct: 373 SVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLM 432
Query: 358 SCENYCSFQCGESLTACVIKNGLGNQPSVLTALLSMYAKLGNIDSAKFLFDQIP-NRNLL 416
+C + + G + + + Q ++ + + G++D A + +P +
Sbjct: 433 ACNHSGMVREGWWFFNRMADHKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVT 492
Query: 417 CWNAMMSAYVRNRFWDASLAVFRQMQFAGLNP 448
W A++SA ++R L + Q ++P
Sbjct: 493 VWGALLSACKKHRH--VELGEYAAQQLFSIDP 522
Score = 134 bits (338), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 88/369 (23%), Positives = 171/369 (46%), Gaps = 4/369 (1%)
Query: 470 KSAHAFSLRKGIVSNLDVLNALLMFYSDGGQFSYAFTLFHRMSTRSSVSWNTLISRCVQN 529
K HA L G+ + ++ L+ S G ++A +F + WN +I +N
Sbjct: 38 KQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRN 97
Query: 530 GAVEEAVILLQRMQKEGVELDMVTLISFLPNLNKNGNIKQGMVIHGYAIKTGCVADVTFL 589
++A+++ MQ V D T L + +++ G +H + G ADV
Sbjct: 98 NHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQ 157
Query: 590 NALITMYCNCGSTNDGRLCLLLFQMGDKREISLWNAIISVYVQTNKAKQAVAFFTELLGA 649
N LI +Y C R + + R I W AI+S Y Q + +A+ F+++
Sbjct: 158 NGLIALYAKCRRLGSARTVFEGLPLPE-RTIVSWTAIVSAYAQNGEPMEALEIFSQMRKM 216
Query: 650 GLEPDNVTVLSIISAGVLINSLNLTHSLMAFVIRKGLDKHVAVSNALMDSYVRCGNISMA 709
++PD V ++S+++A + L S+ A V++ GL+ + +L Y +CG ++ A
Sbjct: 217 DVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATA 276
Query: 710 RKLFGSLIYKDAFSWSVMINGYGLYGDGEAALELFKQMQLSGVRPNEITYLGVLSACSHA 769
+ LF + + W+ MI+GY G A+++F +M VRP+ I+ +SAC+
Sbjct: 277 KILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQV 336
Query: 770 GLVEQSKMVFKSMVEHGISQKMEHYACMVDLLGRTGHLNEA-FIFVKKLPCKPSVSILES 828
G +EQ++ +++ + + + ++D+ + G + A +F + L V + +
Sbjct: 337 GSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTL--DRDVVVWSA 394
Query: 829 LLGACRIHG 837
++ +HG
Sbjct: 395 MIVGYGLHG 403
>sp|Q9ZQ74|PP146_ARATH Pentatricopeptide repeat-containing protein At2g03380,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E47 PE=3
SV=1
Length = 689
Score = 352 bits (902), Expect = 9e-96, Method: Compositional matrix adjust.
Identities = 202/632 (31%), Positives = 331/632 (52%), Gaps = 16/632 (2%)
Query: 271 HGFTIKSGYLFDDFLVPALISMYAGDLDLSTARKLFDSLLEKNASVWNAMISAYTQSKKF 330
HG +G + D + L+S+Y AR +FD + E + +W M+ Y +K+
Sbjct: 64 HGVLTGNGLMGDISIATKLVSLYGFFGYTKDARLVFDQIPEPDFYLWKVMLRCYCLNKES 123
Query: 331 FEAFEIFRQMIRAEMQPDLVTFVSIIPSCENYCSFQCGESLTACVIKNGLGNQPS----V 386
E +++ +++ + D + F + +C G+ + ++K PS V
Sbjct: 124 VEVVKLYDLLMKHGFRYDDIVFSKALKACTELQDLDNGKKIHCQLVK-----VPSFDNVV 178
Query: 387 LTALLSMYAKLGNIDSAKFLFDQIPNRNLLCWNAMMSAYVRNRFWDASLAVFRQMQFAGL 446
LT LL MYAK G I SA +F+ I RN++CW +M++ YV+N + L +F +M+ +
Sbjct: 179 LTGLLDMYAKCGEIKSAHKVFNDITLRNVVCWTSMIAGYVKNDLCEEGLVLFNRMRENNV 238
Query: 447 NPDAVSIISVLSGCSKLDDVLLGKSAHAFSLRKGIVSNLDVLNALLMFYSDGGQFSYAFT 506
+ + +++ C+KL + GK H ++ GI + ++ +LL Y G S A
Sbjct: 239 LGNEYTYGTLIMACTKLSALHQGKWFHGCLVKSGIELSSCLVTSLLDMYVKCGDISNARR 298
Query: 507 LFHRMSTRSSVSWNTLISRCVQNGAVEEAVILLQRMQKEGVELDMVTLISFLPNLNKNGN 566
+F+ S V W +I NG+V EA+ L Q+M+ ++ + VT+ S L N
Sbjct: 299 VFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVEIKPNCVTIASVLSGCGLIEN 358
Query: 567 IKQGMVIHGYAIKTGCVADVTFLNALITMYCNCGSTNDGRLCLLLFQMGDKREISLWNAI 626
++ G +HG +IK G + D NAL+ MY C D + +F+M +++I WN+I
Sbjct: 359 LELGRSVHGLSIKVG-IWDTNVANALVHMYAKCYQNRDAKY---VFEMESEKDIVAWNSI 414
Query: 627 ISVYVQTNKAKQAVAFFTELLGAGLEPDNVTVLSIISAGVLINSLNLTHSLMAFVIRKGL 686
IS + Q +A+ F + + P+ VTV S+ SA + SL + SL A+ ++ G
Sbjct: 415 ISGFSQNGSIHEALFLFHRMNSESVTPNGVTVASLFSACASLGSLAVGSSLHAYSVKLGF 474
Query: 687 --DKHVAVSNALMDSYVRCGNISMARKLFGSLIYKDAFSWSVMINGYGLYGDGEAALELF 744
V V AL+D Y +CG+ AR +F ++ K+ +WS MI GYG GD +LELF
Sbjct: 475 LASSSVHVGTALLDFYAKCGDPQSARLIFDTIEEKNTITWSAMIGGYGKQGDTIGSLELF 534
Query: 745 KQMQLSGVRPNEITYLGVLSACSHAGLVEQSKMVFKSMV-EHGISQKMEHYACMVDLLGR 803
++M +PNE T+ +LSAC H G+V + K F SM ++ + +HY CMVD+L R
Sbjct: 535 EEMLKKQQKPNESTFTSILSACGHTGMVNEGKKYFSSMYKDYNFTPSTKHYTCMVDMLAR 594
Query: 804 TGHLNEAFIFVKKLPCKPSVSILESLLGACRIHGNVELGEIISGMLFEMDPENPGSYVML 863
G L +A ++K+P +P V + L C +H +LGEI+ + ++ P++ YV++
Sbjct: 595 AGELEQALDIIEKMPIQPDVRCFGAFLHGCGMHSRFDLGEIVIKKMLDLHPDDASYYVLV 654
Query: 864 HNIYASAGRWEDAYRVRSCMKRSRLKKVPGFS 895
N+YAS GRW A VR+ MK+ L K+ G S
Sbjct: 655 SNLYASDGRWNQAKEVRNLMKQRGLSKIAGHS 686
Score = 249 bits (635), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 172/647 (26%), Positives = 314/647 (48%), Gaps = 15/647 (2%)
Query: 152 FLIKACSSLSDLRIGREIHCVIFRTGYHQNLVIQTALVDFYAKKGEMLTARLLFDQIPLA 211
L+ C+++ LR + H V+ G ++ I T LV Y G ARL+FDQIP
Sbjct: 49 LLLSKCTNIDSLR---QSHGVLTGNGLMGDISIATKLVSLYGFFGYTKDARLVFDQIPEP 105
Query: 212 DLVSCNTLMAGYSFNGLDQEALETFRRILTVGLKPNVSTFSSVIPVCTRLGHFCFGKSLH 271
D ++ Y N E ++ + ++ G + + FS + CT L GK +H
Sbjct: 106 DFYLWKVMLRCYCLNKESVEVVKLYDLLMKHGFRYDDIVFSKALKACTELQDLDNGKKIH 165
Query: 272 GFTIKSGYLFDDFLVPALISMYAGDLDLSTARKLFDSLLEKNASVWNAMISAYTQSKKFF 331
+K FD+ ++ L+ MYA ++ +A K+F+ + +N W +MI+ Y ++
Sbjct: 166 CQLVKVPS-FDNVVLTGLLDMYAKCGEIKSAHKVFNDITLRNVVCWTSMIAGYVKNDLCE 224
Query: 332 EAFEIFRQMIRAEMQPDLVTFVSIIPSCENYCSFQCGESLTACVIKNGLGNQPSVLTALL 391
E +F +M + + T+ ++I +C + G+ C++K+G+ ++T+LL
Sbjct: 225 EGLVLFNRMRENNVLGNEYTYGTLIMACTKLSALHQGKWFHGCLVKSGIELSSCLVTSLL 284
Query: 392 SMYAKLGNIDSAKFLFDQIPNRNLLCWNAMMSAYVRNRFWDASLAVFRQMQFAGLNPDAV 451
MY K G+I +A+ +F++ + +L+ W AM+ Y N + +L++F++M+ + P+ V
Sbjct: 285 DMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVEIKPNCV 344
Query: 452 SIISVLSGCSKLDDVLLGKSAHAFSLRKGIVSNLDVLNALLMFYSDGGQFSYAFTLFHRM 511
+I SVLSGC ++++ LG+S H S++ GI + +V NAL+ Y+ Q A +F
Sbjct: 345 TIASVLSGCGLIENLELGRSVHGLSIKVGIW-DTNVANALVHMYAKCYQNRDAKYVFEME 403
Query: 512 STRSSVSWNTLISRCVQNGAVEEAVILLQRMQKEGVELDMVTLISFLPNLNKNGNIKQGM 571
S + V+WN++IS QNG++ EA+ L RM E V + VT+ S G++ G
Sbjct: 404 SEKDIVAWNSIISGFSQNGSIHEALFLFHRMNSESVTPNGVTVASLFSACASLGSLAVGS 463
Query: 572 VIHGYAIKTGCVA--DVTFLNALITMYCNCGSTNDGRLCLLLFQMGDKREISLWNAIISV 629
+H Y++K G +A V AL+ Y CG R L+F +++ W+A+I
Sbjct: 464 SLHAYSVKLGFLASSSVHVGTALLDFYAKCGDPQSAR---LIFDTIEEKNTITWSAMIGG 520
Query: 630 YVQTNKAKQAVAFFTELLGAGLEPDNVTVLSIISAGVLINSLNLTHSLMAFVIRK-GLDK 688
Y + ++ F E+L +P+ T SI+SA +N + + +
Sbjct: 521 YGKQGDTIGSLELFEEMLKKQQKPNESTFTSILSACGHTGMVNEGKKYFSSMYKDYNFTP 580
Query: 689 HVAVSNALMDSYVRCGNISMARKLFGSL-IYKDAFSWSVMINGYGLYGDGEAALELFKQM 747
++D R G + A + + I D + ++G G++ + + K+M
Sbjct: 581 STKHYTCMVDMLARAGELEQALDIIEKMPIQPDVRCFGAFLHGCGMHSRFDLGEIVIKKM 640
Query: 748 QLSGVRPNEITYLGVLSAC-SHAGLVEQSKMVFKSMVEHGISQKMEH 793
+ P++ +Y ++S + G Q+K V M + G+S+ H
Sbjct: 641 L--DLHPDDASYYVLVSNLYASDGRWNQAKEVRNLMKQRGLSKIAGH 685
Score = 227 bits (578), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 139/469 (29%), Positives = 245/469 (52%), Gaps = 4/469 (0%)
Query: 104 FPIIKKPCVFLQNLMIRGLSNCGLHADLLHVYIKCRLSGCPSDDFTFPFLIKACSSLSDL 163
F I +P +L +M+R +++ +Y G DD F +KAC+ L DL
Sbjct: 99 FDQIPEPDFYLWKVMLRCYCLNKESVEVVKLYDLLMKHGFRYDDIVFSKALKACTELQDL 158
Query: 164 RIGREIHCVIFRTGYHQNLVIQTALVDFYAKKGEMLTARLLFDQIPLADLVSCNTLMAGY 223
G++IHC + + N+V+ T L+D YAK GE+ +A +F+ I L ++V +++AGY
Sbjct: 159 DNGKKIHCQLVKVPSFDNVVL-TGLLDMYAKCGEIKSAHKVFNDITLRNVVCWTSMIAGY 217
Query: 224 SFNGLDQEALETFRRILTVGLKPNVSTFSSVIPVCTRLGHFCFGKSLHGFTIKSGYLFDD 283
N L +E L F R+ + N T+ ++I CT+L GK HG +KSG
Sbjct: 218 VKNDLCEEGLVLFNRMRENNVLGNEYTYGTLIMACTKLSALHQGKWFHGCLVKSGIELSS 277
Query: 284 FLVPALISMYAGDLDLSTARKLFDSLLEKNASVWNAMISAYTQSKKFFEAFEIFRQMIRA 343
LV +L+ MY D+S AR++F+ + +W AMI YT + EA +F++M
Sbjct: 278 CLVTSLLDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGV 337
Query: 344 EMQPDLVTFVSIIPSCENYCSFQCGESLTACVIKNGLGNQPSVLTALLSMYAKLGNIDSA 403
E++P+ VT S++ C + + G S+ IK G+ + +V AL+ MYAK A
Sbjct: 338 EIKPNCVTIASVLSGCGLIENLELGRSVHGLSIKVGIWD-TNVANALVHMYAKCYQNRDA 396
Query: 404 KFLFDQIPNRNLLCWNAMMSAYVRNRFWDASLAVFRQMQFAGLNPDAVSIISVLSGCSKL 463
K++F+ ++++ WN+++S + +N +L +F +M + P+ V++ S+ S C+ L
Sbjct: 397 KYVFEMESEKDIVAWNSIISGFSQNGSIHEALFLFHRMNSESVTPNGVTVASLFSACASL 456
Query: 464 DDVLLGKSAHAFSLRKGIV--SNLDVLNALLMFYSDGGQFSYAFTLFHRMSTRSSVSWNT 521
+ +G S HA+S++ G + S++ V ALL FY+ G A +F + +++++W+
Sbjct: 457 GSLAVGSSLHAYSVKLGFLASSSVHVGTALLDFYAKCGDPQSARLIFDTIEEKNTITWSA 516
Query: 522 LISRCVQNGAVEEAVILLQRMQKEGVELDMVTLISFLPNLNKNGNIKQG 570
+I + G ++ L + M K+ + + T S L G + +G
Sbjct: 517 MIGGYGKQGDTIGSLELFEEMLKKQQKPNESTFTSILSACGHTGMVNEG 565
Score = 186 bits (472), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 120/380 (31%), Positives = 193/380 (50%), Gaps = 6/380 (1%)
Query: 93 EITSYHIALSSFPIIKKPCVFLQNLMIRGLSNCGLHADLLHVYIKCRLSGCPSDDFTFPF 152
EI S H + + C MI G L + L ++ + R + +++T+
Sbjct: 191 EIKSAHKVFNDITLRNVVC---WTSMIAGYVKNDLCEEGLVLFNRMRENNVLGNEYTYGT 247
Query: 153 LIKACSSLSDLRIGREIHCVIFRTGYHQNLVIQTALVDFYAKKGEMLTARLLFDQIPLAD 212
LI AC+ LS L G+ H + ++G + + T+L+D Y K G++ AR +F++ D
Sbjct: 248 LIMACTKLSALHQGKWFHGCLVKSGIELSSCLVTSLLDMYVKCGDISNARRVFNEHSHVD 307
Query: 213 LVSCNTLMAGYSFNGLDQEALETFRRILTVGLKPNVSTFSSVIPVCTRLGHFCFGKSLHG 272
LV ++ GY+ NG EAL F+++ V +KPN T +SV+ C + + G+S+HG
Sbjct: 308 LVMWTAMIVGYTHNGSVNEALSLFQKMKGVEIKPNCVTIASVLSGCGLIENLELGRSVHG 367
Query: 273 FTIKSGYLFDDFLVPALISMYAGDLDLSTARKLFDSLLEKNASVWNAMISAYTQSKKFFE 332
+IK G ++D + AL+ MYA A+ +F+ EK+ WN++IS ++Q+ E
Sbjct: 368 LSIKVG-IWDTNVANALVHMYAKCYQNRDAKYVFEMESEKDIVAWNSIISGFSQNGSIHE 426
Query: 333 AFEIFRQMIRAEMQPDLVTFVSIIPSCENYCSFQCGESLTACVIKNGLGNQPSVL--TAL 390
A +F +M + P+ VT S+ +C + S G SL A +K G SV TAL
Sbjct: 427 ALFLFHRMNSESVTPNGVTVASLFSACASLGSLAVGSSLHAYSVKLGFLASSSVHVGTAL 486
Query: 391 LSMYAKLGNIDSAKFLFDQIPNRNLLCWNAMMSAYVRNRFWDASLAVFRQMQFAGLNPDA 450
L YAK G+ SA+ +FD I +N + W+AM+ Y + SL +F +M P+
Sbjct: 487 LDFYAKCGDPQSARLIFDTIEEKNTITWSAMIGGYGKQGDTIGSLELFEEMLKKQQKPNE 546
Query: 451 VSIISVLSGCSKLDDVLLGK 470
+ S+LS C V GK
Sbjct: 547 STFTSILSACGHTGMVNEGK 566
>sp|O81767|PP348_ARATH Pentatricopeptide repeat-containing protein At4g33990
OS=Arabidopsis thaliana GN=EMB2758 PE=3 SV=2
Length = 823
Score = 351 bits (900), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 203/635 (31%), Positives = 346/635 (54%), Gaps = 18/635 (2%)
Query: 267 GKSLHGFTIKSGYLFDDFLVPALISMYAGDLDLSTARKLFDSLLEKNASVWNAMISAYTQ 326
K LH + S + + + L+++Y +++ AR FD + ++ WN MIS Y +
Sbjct: 70 AKCLHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLMISGYGR 129
Query: 327 ---SKKFFEAFEIFRQMIRAEMQPDLVTFVSIIPSCENYCSFQCGESLTACVIKNGLGNQ 383
S + F +F M+ + + PD TF S++ +C G + +K G
Sbjct: 130 AGNSSEVIRCFSLF--MLSSGLTPDYRTFPSVLKACRTVID---GNKIHCLALKFGFMWD 184
Query: 384 PSVLTALLSMYAKLGNIDSAKFLFDQIPNRNLLCWNAMMSAYVRNRFWDASLAVFRQMQF 443
V +L+ +Y++ + +A+ LFD++P R++ WNAM+S Y ++ +L + ++
Sbjct: 185 VYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEALTLSNGLRA 244
Query: 444 AGLNPDAVSIISVLSGCSKLDDVLLGKSAHAFSLRKGIVSNLDVLNALLMFYSDGGQFSY 503
D+V+++S+LS C++ D G + H++S++ G+ S L V N L+ Y++ G+
Sbjct: 245 M----DSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRD 300
Query: 504 AFTLFHRMSTRSSVSWNTLISRCVQNGAVEEAVILLQRMQKEGVELDMVTLISFLPNLNK 563
+F RM R +SWN++I N A+ L Q M+ ++ D +TLIS L++
Sbjct: 301 CQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQ 360
Query: 564 NGNIKQGMVIHGYAIKTGC-VADVTFLNALITMYCNCGSTNDGRLCLLLFQMGDKREISL 622
G+I+ + G+ ++ G + D+T NA++ MY G + R +F ++
Sbjct: 361 LGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARA---VFNWLPNTDVIS 417
Query: 623 WNAIISVYVQTNKAKQAVAFFTELLGAG-LEPDNVTVLSIISAGVLINSLNLTHSLMAFV 681
WN IIS Y Q A +A+ + + G + + T +S++ A +L L +
Sbjct: 418 WNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRL 477
Query: 682 IRKGLDKHVAVSNALMDSYVRCGNISMARKLFGSLIYKDAFSWSVMINGYGLYGDGEAAL 741
++ GL V V +L D Y +CG + A LF + ++ W+ +I +G +G GE A+
Sbjct: 478 LKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAV 537
Query: 742 ELFKQMQLSGVRPNEITYLGVLSACSHAGLVEQSKMVFKSM-VEHGISQKMEHYACMVDL 800
LFK+M GV+P+ IT++ +LSACSH+GLV++ + F+ M ++GI+ ++HY CMVD+
Sbjct: 538 MLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITPSLKHYGCMVDM 597
Query: 801 LGRTGHLNEAFIFVKKLPCKPSVSILESLLGACRIHGNVELGEIISGMLFEMDPENPGSY 860
GR G L A F+K + +P SI +LL ACR+HGNV+LG+I S LFE++PE+ G +
Sbjct: 598 YGRAGQLETALKFIKSMSLQPDASIWGALLSACRVHGNVDLGKIASEHLFEVEPEHVGYH 657
Query: 861 VMLHNIYASAGRWEDAYRVRSCMKRSRLKKVPGFS 895
V+L N+YASAG+WE +RS L+K PG+S
Sbjct: 658 VLLSNMYASAGKWEGVDEIRSIAHGKGLRKTPGWS 692
Score = 263 bits (672), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 184/635 (28%), Positives = 319/635 (50%), Gaps = 49/635 (7%)
Query: 153 LIKACSSLSDLRIGREIHCVIFRTGYHQNLVIQTALVDFYAKKGEMLTARLLFDQIPLAD 212
L + C++L + +H + + QN+ I LV+ Y G + AR FD I D
Sbjct: 60 LFRYCTNLQSAKC---LHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQNRD 116
Query: 213 LVSCNTLMAGYSFNGLDQEALETFRR-ILTVGLKPNVSTFSSVIPVCTRLGHFCFGKSLH 271
+ + N +++GY G E + F +L+ GL P+ TF SV+ C + G +H
Sbjct: 117 VYAWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACRTV---IDGNKIH 173
Query: 272 GFTIKSGYLFDDFLVPALISMYAGDLDLSTARKLFDSLLEKNASVWNAMISAYTQSKKFF 331
+K G+++D ++ +LI +Y+ + AR LFD + ++ WNAMIS Y QS
Sbjct: 174 CLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAK 233
Query: 332 EAFEIFRQMIRAEMQPDLVTFVSIIPSCENYCSFQCGESLTACVIKNGLGNQPSVLTALL 391
EA + +RA D VT VS++ +C F G ++ + IK+GL ++ V L+
Sbjct: 234 EALTL-SNGLRA---MDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLI 289
Query: 392 SMYAKLGNIDSAKFLFDQIPNRNLLCWNAMMSAYVRNRFWDASLAVFRQMQFAGLNPDAV 451
+YA+ G + + +FD++ R+L+ WN+++ AY N ++++F++M+ + + PD +
Sbjct: 290 DLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCL 349
Query: 452 SIISVLSGCSKLDDVLLGKSAHAFSLRKG-IVSNLDVLNALLMFYSDGGQFSYAFTLFHR 510
++IS+ S S+L D+ +S F+LRKG + ++ + NA+++ Y+ G A +F+
Sbjct: 350 TLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNW 409
Query: 511 MSTRSSVSWNTLISRCVQNGAVEEAVILLQRMQKEG-VELDMVTLISFLPNLNKNGNIKQ 569
+ +SWNT+IS QNG EA+ + M++EG + + T +S LP ++ G ++Q
Sbjct: 410 LPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQ 469
Query: 570 GMVIHGYAIKTGCVADVTFLNALITMYCNCGSTNDGRLCLLLFQMGDKREISLWNAIISV 629
GM +HG +K G DV + +L MY CG D L LF + WN +I+
Sbjct: 470 GMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDA---LSLFYQIPRVNSVPWNTLIAC 526
Query: 630 YVQTNKAKQAVAFFTELLGAGLEPDNVTVLSIISAGVLINSLNLTHSLMAFVIRKGLDKH 689
+ ++AV F E+L G++PD++T ++++SA +HS
Sbjct: 527 HGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSA--------CSHS------------- 565
Query: 690 VAVSNALMDSYVRCGNISMARKLFGSLIYKDAFSWSVMINGYGLYGDGEAALELFKQMQL 749
L+D C M + +G I + M++ YG G E AL+ K M L
Sbjct: 566 -----GLVDEGQWC--FEMMQTDYG--ITPSLKHYGCMVDMYGRAGQLETALKFIKSMSL 616
Query: 750 SGVRPNEITYLGVLSACSHAGLVEQSKMVFKSMVE 784
+P+ + +LSAC G V+ K+ + + E
Sbjct: 617 ---QPDASIWGALLSACRVHGNVDLGKIASEHLFE 648
Score = 230 bits (587), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 155/566 (27%), Positives = 290/566 (51%), Gaps = 23/566 (4%)
Query: 99 IALSSFPIIKKPCVFLQNLMIRGLSNCGLHADLLHVYIKCRLSGCPSDDF-TFPFLIKAC 157
+A +F I+ V+ NLMI G G ++++ + LS + D+ TFP ++KAC
Sbjct: 104 LARHTFDHIQNRDVYAWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKAC 163
Query: 158 SSLSDLRIGREIHCVIFRTGYHQNLVIQTALVDFYAKKGEMLTARLLFDQIPLADLVSCN 217
++ D G +IHC+ + G+ ++ + +L+ Y++ + AR+LFD++P+ D+ S N
Sbjct: 164 RTVID---GNKIHCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWN 220
Query: 218 TLMAGYSFNGLDQEALETFRRILTVGLKPNVS-TFSSVIPVCTRLGHFCFGKSLHGFTIK 276
+++GY +G +EAL L+ GL+ S T S++ CT G F G ++H ++IK
Sbjct: 221 AMISGYCQSGNAKEAL-----TLSNGLRAMDSVTVVSLLSACTEAGDFNRGVTIHSYSIK 275
Query: 277 SGYLFDDFLVPALISMYAGDLDLSTARKLFDSLLEKNASVWNAMISAYTQSKKFFEAFEI 336
G + F+ LI +YA L +K+FD + ++ WN++I AY +++ A +
Sbjct: 276 HGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISL 335
Query: 337 FRQMIRAEMQPDLVTFVSIIPSCENYCSFQCGESLTACVIKNG-LGNQPSVLTALLSMYA 395
F++M + +QPD +T +S+ + S+ ++ G ++ A++ MYA
Sbjct: 336 FQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYA 395
Query: 396 KLGNIDSAKFLFDQIPNRNLLCWNAMMSAYVRNRFWDASLAVFRQMQFAG-LNPDAVSII 454
KLG +DSA+ +F+ +PN +++ WN ++S Y +N F ++ ++ M+ G + + + +
Sbjct: 396 KLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWV 455
Query: 455 SVLSGCSKLDDVLLGKSAHAFSLRKGIVSNLDVLNALLMFYSDGGQFSYAFTLFHRMSTR 514
SVL CS+ + G H L+ G+ ++ V+ +L Y G+ A +LF+++
Sbjct: 456 SVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRV 515
Query: 515 SSVSWNTLISRCVQNGAVEEAVILLQRMQKEGVELDMVTLISFLPNLNKNGNIKQGM-VI 573
+SV WNTLI+ +G E+AV+L + M EGV+ D +T ++ L + +G + +G
Sbjct: 516 NSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCF 575
Query: 574 HGYAIKTGCVADVTFLNALITMYCNCGSTNDGRLCLLLFQMGDKREISLWNAIIS---VY 630
G + ++ MY G + M + + S+W A++S V+
Sbjct: 576 EMMQTDYGITPSLKHYGCMVDMYGRAGQLETA--LKFIKSMSLQPDASIWGALLSACRVH 633
Query: 631 VQTNKAKQAVAFFTELLGAGLEPDNV 656
+ K A E +EP++V
Sbjct: 634 GNVDLGKIASEHLFE-----VEPEHV 654
Score = 179 bits (453), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 119/445 (26%), Positives = 217/445 (48%), Gaps = 15/445 (3%)
Query: 146 DDFTFPFLIKACSSLSDLRIGREIHCVIFRTGYHQNLVIQTALVDFYAKKGEMLTARLLF 205
D T L+ AC+ D G IH + G L + L+D YA+ G + + +F
Sbjct: 246 DSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVF 305
Query: 206 DQIPLADLVSCNTLMAGYSFNGLDQEALETFRRILTVGLKPNVSTFSSVIPVCTRLGHFC 265
D++ + DL+S N+++ Y N A+ F+ + ++P+ T S+ + ++LG
Sbjct: 306 DRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIR 365
Query: 266 FGKSLHGFTIKSGYLFDDFLVP-ALISMYAGDLDLSTARKLFDSLLEKNASVWNAMISAY 324
+S+ GFT++ G+ +D + A++ MYA + +AR +F+ L + WN +IS Y
Sbjct: 366 ACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGY 425
Query: 325 TQSKKFFEAFEIFRQM-IRAEMQPDLVTFVSIIPSCENYCSFQCGESLTACVIKNGLGNQ 383
Q+ EA E++ M E+ + T+VS++P+C + + G L ++KNGL
Sbjct: 426 AQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLD 485
Query: 384 PSVLTALLSMYAKLGNIDSAKFLFDQIPNRNLLCWNAMMSAYVRNRFWDASLAVFRQMQF 443
V+T+L MY K G ++ A LF QIP N + WN +++ + + + ++ +F++M
Sbjct: 486 VFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLD 545
Query: 444 AGLNPDAVSIISVLSGCSKLDDVLLGKSAHAFSLRK---GIVSNLDVLNALLMFYSDGGQ 500
G+ PD ++ +++LS CS L+ + F + + GI +L ++ Y GQ
Sbjct: 546 EGVKPDHITFVTLLSACSH--SGLVDEGQWCFEMMQTDYGITPSLKHYGCMVDMYGRAGQ 603
Query: 501 FSYAFTLFHRMSTRSSVS-WNTLISRCVQNGAVEEAVILLQRMQKEGVELDMVTLISFLP 559
A MS + S W L+S C +G V+ I + + + VE + V L
Sbjct: 604 LETALKFIKSMSLQPDASIWGALLSACRVHGNVDLGKIASEHLFE--VEPEHVGYHVLLS 661
Query: 560 NLNKNGNIKQGM-----VIHGYAIK 579
N+ + +G+ + HG ++
Sbjct: 662 NMYASAGKWEGVDEIRSIAHGKGLR 686
>sp|Q9SJ73|PP148_ARATH Pentatricopeptide repeat-containing protein At2g04860
OS=Arabidopsis thaliana GN=PCMP-E74 PE=2 SV=3
Length = 692
Score = 345 bits (885), Expect = 8e-94, Method: Compositional matrix adjust.
Identities = 211/678 (31%), Positives = 360/678 (53%), Gaps = 15/678 (2%)
Query: 212 DLVSCNTLMAGYSFNGLDQEALETFRRILTVGLKPNVSTFSSVI-PVCTRLGHFCFG-KS 269
DL ++L+ + + FR +L L PN T S + T F +
Sbjct: 12 DLSYFHSLLKSCIHGEISSSPITIFRDLLRSSLTPNHFTMSIFLQATTTSFNSFKLQVEQ 71
Query: 270 LHGFTIKSGYLFDDFLVPALISMYAGDLDLSTARKLFDSLLEKNASVWNAMISAYTQSKK 329
+ KSG ++ +L+++Y +++A+ LFD + E++ VWNA+I Y+++
Sbjct: 72 VQTHLTKSGLDRFVYVKTSLLNLYLKKGCVTSAQMLFDEMPERDTVVWNALICGYSRNGY 131
Query: 330 FFEAFEIFRQMIRAEMQPDLVTFVSIIPSCENYCSF-QCGESLTACVIKNGLGNQPSVLT 388
+A+++F M++ P T V+++P C C F G S+ K+GL V
Sbjct: 132 ECDAWKLFIVMLQQGFSPSATTLVNLLPFC-GQCGFVSQGRSVHGVAAKSGLELDSQVKN 190
Query: 389 ALLSMYAKLGNIDSAKFLFDQIPNRNLLCWNAMMSAYVRNRFWDASLAVFRQMQFAGLNP 448
AL+S Y+K + SA+ LF ++ +++ + WN M+ AY ++ + ++ VF+ M +
Sbjct: 191 ALISFYSKCAELGSAEVLFREMKDKSTVSWNTMIGAYSQSGLQEEAITVFKNMFEKNVEI 250
Query: 449 DAVSIISVLSGCSKLDDVLLGKSAHAFSLRKGIVSNLDVLNALLMFYSDGGQFSYAFTLF 508
V+II++LS + + H ++ G+V+++ V+ +L+ YS G A L+
Sbjct: 251 SPVTIINLLSAHVSHEPL------HCLVVKCGMVNDISVVTSLVCAYSRCGCLVSAERLY 304
Query: 509 HRMSTRSSVSWNTLISRCVQNGAVEEAVILLQRMQKEGVELDMVTLISFLPNLNKNGNIK 568
S V +++S + G ++ AV+ + ++ +++D V L+ L K+ +I
Sbjct: 305 ASAKQDSIVGLTSIVSCYAEKGDMDIAVVYFSKTRQLCMKIDAVALVGILHGCKKSSHID 364
Query: 569 QGMVIHGYAIKTGCVADVTFLNALITMYCNCGSTNDGRLCLLLFQMGDKREISLWNAIIS 628
GM +HGYAIK+G +N LITMY +D L LF+ + + WN++IS
Sbjct: 365 IGMSLHGYAIKSGLCTKTLVVNGLITMY---SKFDDVETVLFLFEQLQETPLISWNSVIS 421
Query: 629 VYVQTNKAKQAVAFFTEL-LGAGLEPDNVTVLSIISAGVLINSLNLTHSLMAFVIRKGLD 687
VQ+ +A A F ++ L GL PD +T+ S+++ + LNL L + +R +
Sbjct: 422 GCVQSGRASTAFEVFHQMMLTGGLLPDAITIASLLAGCSQLCCLNLGKELHGYTLRNNFE 481
Query: 688 KHVAVSNALMDSYVRCGNISMARKLFGSLIYKDAFSWSVMINGYGLYGDGEAALELFKQM 747
V AL+D Y +CGN A +F S+ +W+ MI+GY L G AL + +M
Sbjct: 482 NENFVCTALIDMYAKCGNEVQAESVFKSIKAPCTATWNSMISGYSLSGLQHRALSCYLEM 541
Query: 748 QLSGVRPNEITYLGVLSACSHAGLVEQSKMVFKSMV-EHGISQKMEHYACMVDLLGRTGH 806
+ G++P+EIT+LGVLSAC+H G V++ K+ F++M+ E GIS ++HYA MV LLGR
Sbjct: 542 REKGLKPDEITFLGVLSACNHGGFVDEGKICFRAMIKEFGISPTLQHYALMVGLLGRACL 601
Query: 807 LNEAFIFVKKLPCKPSVSILESLLGACRIHGNVELGEIISGMLFEMDPENPGSYVMLHNI 866
EA + K+ KP ++ +LL AC IH +E+GE ++ +F +D +N G YV++ N+
Sbjct: 602 FTEALYLIWKMDIKPDSAVWGALLSACIIHRELEVGEYVARKMFMLDYKNGGLYVLMSNL 661
Query: 867 YASAGRWEDAYRVRSCMK 884
YA+ W+D RVR+ MK
Sbjct: 662 YATEAMWDDVVRVRNMMK 679
Score = 241 bits (615), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 148/522 (28%), Positives = 272/522 (52%), Gaps = 12/522 (2%)
Query: 146 DDFTFPFLIKACS-SLSDLRIGRE-IHCVIFRTGYHQNLVIQTALVDFYAKKGEMLTARL 203
+ FT ++A + S + ++ E + + ++G + + ++T+L++ Y KKG + +A++
Sbjct: 47 NHFTMSIFLQATTTSFNSFKLQVEQVQTHLTKSGLDRFVYVKTSLLNLYLKKGCVTSAQM 106
Query: 204 LFDQIPLADLVSCNTLMAGYSFNGLDQEALETFRRILTVGLKPNVSTFSSVIPVCTRLGH 263
LFD++P D V N L+ GYS NG + +A + F +L G P+ +T +++P C + G
Sbjct: 107 LFDEMPERDTVVWNALICGYSRNGYECDAWKLFIVMLQQGFSPSATTLVNLLPFCGQCGF 166
Query: 264 FCFGKSLHGFTIKSGYLFDDFLVPALISMYAGDLDLSTARKLFDSLLEKNASVWNAMISA 323
G+S+HG KSG D + ALIS Y+ +L +A LF + +K+ WN MI A
Sbjct: 167 VSQGRSVHGVAAKSGLELDSQVKNALISFYSKCAELGSAEVLFREMKDKSTVSWNTMIGA 226
Query: 324 YTQSKKFFEAFEIFRQMIRAEMQPDLVTFVSIIPSCENYCSFQCGESLTACVIKNGLGNQ 383
Y+QS EA +F+ M ++ VT ++++ + ++ E L V+K G+ N
Sbjct: 227 YSQSGLQEEAITVFKNMFEKNVEISPVTIINLLSAHVSH------EPLHCLVVKCGMVND 280
Query: 384 PSVLTALLSMYAKLGNIDSAKFLFDQIPNRNLLCWNAMMSAYVRNRFWDASLAVFRQMQF 443
SV+T+L+ Y++ G + SA+ L+ +++ +++S Y D ++ F + +
Sbjct: 281 ISVVTSLVCAYSRCGCLVSAERLYASAKQDSIVGLTSIVSCYAEKGDMDIAVVYFSKTRQ 340
Query: 444 AGLNPDAVSIISVLSGCSKLDDVLLGKSAHAFSLRKGIVSNLDVLNALLMFYSDGGQFSY 503
+ DAV+++ +L GC K + +G S H ++++ G+ + V+N L+ YS
Sbjct: 341 LCMKIDAVALVGILHGCKKSSHIDIGMSLHGYAIKSGLCTKTLVVNGLITMYSKFDDVET 400
Query: 504 AFTLFHRMSTRSSVSWNTLISRCVQNGAVEEAV-ILLQRMQKEGVELDMVTLISFLPNLN 562
LF ++ +SWN++IS CVQ+G A + Q M G+ D +T+ S L +
Sbjct: 401 VLFLFEQLQETPLISWNSVISGCVQSGRASTAFEVFHQMMLTGGLLPDAITIASLLAGCS 460
Query: 563 KNGNIKQGMVIHGYAIKTGCVADVTFLNALITMYCNCGSTNDGRLCLLLFQMGDKREISL 622
+ + G +HGY ++ + ALI MY CG+ +F+ +
Sbjct: 461 QLCCLNLGKELHGYTLRNNFENENFVCTALIDMYAKCGNEVQAE---SVFKSIKAPCTAT 517
Query: 623 WNAIISVYVQTNKAKQAVAFFTELLGAGLEPDNVTVLSIISA 664
WN++IS Y + +A++ + E+ GL+PD +T L ++SA
Sbjct: 518 WNSMISGYSLSGLQHRALSCYLEMREKGLKPDEITFLGVLSA 559
Score = 192 bits (488), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 138/524 (26%), Positives = 257/524 (49%), Gaps = 26/524 (4%)
Query: 310 LEKNASVWNAMISAYTQSKKFFEAFEIFRQMIRAEMQPDLVTF-VSIIPSCENYCSFQCG 368
L ++ S +++++ + + IFR ++R+ + P+ T + + + ++ SF+
Sbjct: 9 LYRDLSYFHSLLKSCIHGEISSSPITIFRDLLRSSLTPNHFTMSIFLQATTTSFNSFKLQ 68
Query: 369 -ESLTACVIKNGLGNQPSVLTALLSMYAKLGNIDSAKFLFDQIPNRNLLCWNAMMSAYVR 427
E + + K+GL V T+LL++Y K G + SA+ LFD++P R+ + WNA++ Y R
Sbjct: 69 VEQVQTHLTKSGLDRFVYVKTSLLNLYLKKGCVTSAQMLFDEMPERDTVVWNALICGYSR 128
Query: 428 NRFWDASLAVFRQMQFAGLNPDAVSIISVLSGCSKLDDVLLGKSAHAFSLRKGIVSNLDV 487
N + + +F M G +P A +++++L C + V G+S H + + G+ + V
Sbjct: 129 NGYECDAWKLFIVMLQQGFSPSATTLVNLLPFCGQCGFVSQGRSVHGVAAKSGLELDSQV 188
Query: 488 LNALLMFYSDGGQFSYAFTLFHRMSTRSSVSWNTLISRCVQNGAVEEAVILLQRMQKEGV 547
NAL+ FYS + A LF M +S+VSWNT+I Q+G EEA+ + + M ++ V
Sbjct: 189 KNALISFYSKCAELGSAEVLFREMKDKSTVSWNTMIGAYSQSGLQEEAITVFKNMFEKNV 248
Query: 548 ELDMVTLISFLPNLNKNGNIKQGMVIHGYAIKTGCVADVTFLNALITMYCNCGSTNDGRL 607
E+ VT+I+ L + ++ +H +K G V D++ + +L+ Y CG
Sbjct: 249 EISPVTIINLL-----SAHVSHE-PLHCLVVKCGMVNDISVVTSLVCAYSRCG------- 295
Query: 608 CLL----LFQMGDKREISLWNAIISVYVQTNKAKQAVAFFTELLGAGLEPDNVTVLSIIS 663
CL+ L+ + I +I+S Y + AV +F++ ++ D V ++ I+
Sbjct: 296 CLVSAERLYASAKQDSIVGLTSIVSCYAEKGDMDIAVVYFSKTRQLCMKIDAVALVGILH 355
Query: 664 AGVLINSLNLTHSLMAFVIRKGLDKHVAVSNALMDSYVRCGNISMARKLFGSLIYKDAFS 723
+ +++ SL + I+ GL V N L+ Y + ++ LF L S
Sbjct: 356 GCKKSSHIDIGMSLHGYAIKSGLCTKTLVVNGLITMYSKFDDVETVLFLFEQLQETPLIS 415
Query: 724 WSVMINGYGLYGDGEAALELFKQMQLS-GVRPNEITYLGVLSACSHAGLVEQSKMVFKSM 782
W+ +I+G G A E+F QM L+ G+ P+ IT +L+ CS + K +
Sbjct: 416 WNSVISGCVQSGRASTAFEVFHQMMLTGGLLPDAITIASLLAGCSQLCCLNLGKELHGYT 475
Query: 783 VEHGISQKMEHYAC--MVDLLGRTGHLNEAFIFVK--KLPCKPS 822
+ + E++ C ++D+ + G+ +A K K PC +
Sbjct: 476 LRNNFEN--ENFVCTALIDMYAKCGNEVQAESVFKSIKAPCTAT 517
Score = 191 bits (485), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 140/520 (26%), Positives = 249/520 (47%), Gaps = 20/520 (3%)
Query: 116 NLMIRGLSNCGLHADLLHVYIKCRLSGCPSDDFTFPFLIKACSSLSDLRIGREIHCVIFR 175
N +I G S G D ++I G T L+ C + GR +H V +
Sbjct: 120 NALICGYSRNGYECDAWKLFIVMLQQGFSPSATTLVNLLPFCGQCGFVSQGRSVHGVAAK 179
Query: 176 TGYHQNLVIQTALVDFYAKKGEMLTARLLFDQIPLADLVSCNTLMAGYSFNGLDQEALET 235
+G + ++ AL+ FY+K E+ +A +LF ++ VS NT++ YS +GL +EA+
Sbjct: 180 SGLELDSQVKNALISFYSKCAELGSAEVLFREMKDKSTVSWNTMIGAYSQSGLQEEAITV 239
Query: 236 FRRILTVGLKPNVSTFSSVIPVCTRLGHFCFGKSLHGFTIKSGYLFDDFLVPALISMYAG 295
F+ + + NV S + + L + LH +K G + D +V +L+ Y+
Sbjct: 240 FKNM----FEKNVEI--SPVTIINLLSAHVSHEPLHCLVVKCGMVNDISVVTSLVCAYSR 293
Query: 296 DLDLSTARKLFDSLLEKNASVWNAMISAYTQSKKFFEAFEIFRQMIRAEMQPDLVTFVSI 355
L +A +L+ S + + +++S Y + A F + + M+ D V V I
Sbjct: 294 CGCLVSAERLYASAKQDSIVGLTSIVSCYAEKGDMDIAVVYFSKTRQLCMKIDAVALVGI 353
Query: 356 IPSCENYCSFQCGESLTACVIKNGLGNQPSVLTALLSMYAKLGNIDSAKFLFDQIPNRNL 415
+ C+ G SL IK+GL + V+ L++MY+K ++++ FLF+Q+ L
Sbjct: 354 LHGCKKSSHIDIGMSLHGYAIKSGLCTKTLVVNGLITMYSKFDDVETVLFLFEQLQETPL 413
Query: 416 LCWNAMMSAYVRNRFWDASLAVFRQMQF-AGLNPDAVSIISVLSGCSKLDDVLLGKSAHA 474
+ WN+++S V++ + VF QM GL PDA++I S+L+GCS+L + LGK H
Sbjct: 414 ISWNSVISGCVQSGRASTAFEVFHQMMLTGGLLPDAITIASLLAGCSQLCCLNLGKELHG 473
Query: 475 FSLRKGIVSNLDVLNALLMFYSDGGQFSYAFTLFHRMSTRSSVSWNTLISRCVQNGAVEE 534
++LR + V AL+ Y+ G A ++F + + +WN++IS +G
Sbjct: 474 YTLRNNFENENFVCTALIDMYAKCGNEVQAESVFKSIKAPCTATWNSMISGYSLSGLQHR 533
Query: 535 AVILLQRMQKEGVELDMVTLISFLPNLNKNGNIKQGMVIHGYAIKTGCVADVTFLNALIT 594
A+ M+++G++ D +T + L N G + +G + IK ++ AL+
Sbjct: 534 ALSCYLEMREKGLKPDEITFLGVLSACNHGGFVDEGKICFRAMIKEFGISPTLQHYALMV 593
Query: 595 MYCNCGSTNDGRLCL------LLFQMGDKREISLWNAIIS 628
GR CL L+++M K + ++W A++S
Sbjct: 594 GLL-------GRACLFTEALYLIWKMDIKPDSAVWGALLS 626
Score = 80.1 bits (196), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 96/217 (44%), Gaps = 15/217 (6%)
Query: 116 NLMIRGLSNCGLHADLLHVYIKCRLSG-CPSDDFTFPFLIKACSSLSDLRIGREIHCVIF 174
N +I G G + V+ + L+G D T L+ CS L L +G+E+H
Sbjct: 417 NSVISGCVQSGRASTAFEVFHQMMLTGGLLPDAITIASLLAGCSQLCCLNLGKELHGYTL 476
Query: 175 RTGYHQNLVIQTALVDFYAKKGEMLTARLLFDQIPLADLVSCNTLMAGYSFNGLDQEALE 234
R + + TAL+D YAK G + A +F I + N++++GYS +GL AL
Sbjct: 477 RNNFENENFVCTALIDMYAKCGNEVQAESVFKSIKAPCTATWNSMISGYSLSGLQHRALS 536
Query: 235 TFRRILTVGLKPNVSTFSSVIPVCTRLGHFCFGKSLHGFTIKSGYLFDDFLVPALISMYA 294
+ + GLKP+ TF V+ C G GK IK +F + + YA
Sbjct: 537 CYLEMREKGLKPDEITFLGVLSACNHGGFVDEGKICFRAMIK------EFGISPTLQHYA 590
Query: 295 GDLDLSTARKLFDSLL--------EKNASVWNAMISA 323
+ L LF L + +++VW A++SA
Sbjct: 591 LMVGLLGRACLFTEALYLIWKMDIKPDSAVWGALLSA 627
Score = 40.0 bits (92), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 29/59 (49%)
Query: 100 ALSSFPIIKKPCVFLQNLMIRGLSNCGLHADLLHVYIKCRLSGCPSDDFTFPFLIKACS 158
A S F IK PC N MI G S GL L Y++ R G D+ TF ++ AC+
Sbjct: 503 AESVFKSIKAPCTATWNSMISGYSLSGLQHRALSCYLEMREKGLKPDEITFLGVLSACN 561
>sp|Q9SUH6|PP341_ARATH Pentatricopeptide repeat-containing protein At4g30700
OS=Arabidopsis thaliana GN=DYW9 PE=2 SV=1
Length = 792
Score = 345 bits (884), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 187/630 (29%), Positives = 335/630 (53%), Gaps = 9/630 (1%)
Query: 271 HGFTIKSGYLFDDFLVPALISMYAGDLDLSTARKLFDSLLEKNASVWNAMISAYTQSKKF 330
H I G+ D L+ L + + AR +F S+ + ++N ++ ++ ++
Sbjct: 40 HAQIILHGFRNDISLLTKLTQRLSDLGAIYYARDIFLSVQRPDVFLFNVLMRGFSVNESP 99
Query: 331 FEAFEIFRQMIRA-EMQPDLVTFVSIIPSCENYCSFQCGESLTACVIKNGLGNQPSVLTA 389
+ +F + ++ +++P+ T+ I + + + G + + +G ++ + +
Sbjct: 100 HSSLSVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAGRVIHGQAVVDGCDSELLLGSN 159
Query: 390 LLSMYAKLGNIDSAKFLFDQIPNRNLLCWNAMMSAYVRNRFWDASLAVFRQM-QFAGLNP 448
++ MY K ++ A+ +FD++P ++ + WN M+S Y +N + S+ VFR + +
Sbjct: 160 IVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESCTRL 219
Query: 449 DAVSIISVLSGCSKLDDVLLGKSAHAFSLRKGIVSNLDVLNALLMFYSDGGQFSYAFTLF 508
D +++ +L ++L ++ LG H+ + + G S+ VL + YS G+ LF
Sbjct: 220 DTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSALF 279
Query: 509 HRMSTRSSVSWNTLISRCVQNGAVEEAVILLQRMQKEGVELDMVTLISFLPNLNKNGNIK 568
V++N +I NG E ++ L + + G L TL+S +P +G++
Sbjct: 280 REFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRSSTLVSLVP---VSGHLM 336
Query: 569 QGMVIHGYAIKTGCVADVTFLNALITMYCNCGSTNDGRLCLLLFQMGDKREISLWNAIIS 628
IHGY +K+ ++ + AL T+Y R LF ++ + WNA+IS
Sbjct: 337 LIYAIHGYCLKSNFLSHASVSTALTTVYSKLNEIESARK---LFDESPEKSLPSWNAMIS 393
Query: 629 VYVQTNKAKQAVAFFTELLGAGLEPDNVTVLSIISAGVLINSLNLTHSLMAFVIRKGLDK 688
Y Q + A++ F E+ + P+ VT+ I+SA + +L+L + V +
Sbjct: 394 GYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFES 453
Query: 689 HVAVSNALMDSYVRCGNISMARKLFGSLIYKDAFSWSVMINGYGLYGDGEAALELFKQMQ 748
+ VS AL+ Y +CG+I+ AR+LF + K+ +W+ MI+GYGL+G G+ AL +F +M
Sbjct: 454 SIYVSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYGLHGQGQEALNIFYEML 513
Query: 749 LSGVRPNEITYLGVLSACSHAGLVEQSKMVFKSMVE-HGISQKMEHYACMVDLLGRTGHL 807
SG+ P +T+L VL ACSHAGLV++ +F SM+ +G ++HYACMVD+LGR GHL
Sbjct: 514 NSGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACMVDILGRAGHL 573
Query: 808 NEAFIFVKKLPCKPSVSILESLLGACRIHGNVELGEIISGMLFEMDPENPGSYVMLHNIY 867
A F++ + +P S+ E+LLGACRIH + L +S LFE+DP+N G +V+L NI+
Sbjct: 574 QRALQFIEAMSIEPGSSVWETLLGACRIHKDTNLARTVSEKLFELDPDNVGYHVLLSNIH 633
Query: 868 ASAGRWEDAYRVRSCMKRSRLKKVPGFSLV 897
++ + A VR K+ +L K PG++L+
Sbjct: 634 SADRNYPQAATVRQTAKKRKLAKAPGYTLI 663
Score = 217 bits (553), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 161/623 (25%), Positives = 288/623 (46%), Gaps = 21/623 (3%)
Query: 149 TFPFLIKACSSLSDLRIGREIHCVIFRTGYHQNLVIQTALVDFYAKKGEMLTARLLFDQI 208
T+ K +S+S L + H I G+ ++ + T L + G + AR +F +
Sbjct: 22 TYLDFFKRSTSISHLA---QTHAQIILHGFRNDISLLTKLTQRLSDLGAIYYARDIFLSV 78
Query: 209 PLADLVSCNTLMAGYSFNGLDQEALETFRRIL-TVGLKPNVSTFSSVIPVCTRLGHFCFG 267
D+ N LM G+S N +L F + + LKPN ST++ I + G
Sbjct: 79 QRPDVFLFNVLMRGFSVNESPHSSLSVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAG 138
Query: 268 KSLHGFTIKSGYLFDDFLVPALISMYAGDLDLSTARKLFDSLLEKNASVWNAMISAYTQS 327
+ +HG + G + L ++ MY + ARK+FD + EK+ +WN MIS Y ++
Sbjct: 139 RVIHGQAVVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKN 198
Query: 328 KKFFEAFEIFRQMIRAE-MQPDLVTFVSIIPSCENYCSFQCGESLTACVIKNGLGNQPSV 386
+ + E+ ++FR +I + D T + I+P+ + G + + K G + V
Sbjct: 199 EMYVESIQVFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYV 258
Query: 387 LTALLSMYAKLGNIDSAKFLFDQIPNRNLLCWNAMMSAYVRNRFWDASLAVFRQMQFAGL 446
LT +S+Y+K G I LF + +++ +NAM+ Y N + SL++F+++ +G
Sbjct: 259 LTGFISLYSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGA 318
Query: 447 NPDAVSIISVLSGCSKLDDVLLGKSAHAFSLRKGIVSNLDVLNALLMFYSDGGQFSYAFT 506
+ +++S++ L +L + H + L+ +S+ V AL YS + A
Sbjct: 319 RLRSSTLVSLVPVSGHL---MLIYAIHGYCLKSNFLSHASVSTALTTVYSKLNEIESARK 375
Query: 507 LFHRMSTRSSVSWNTLISRCVQNGAVEEAVILLQRMQKEGVELDMVTLISFLPNLNKNGN 566
LF +S SWN +IS QNG E+A+ L + MQK + VT+ L + G
Sbjct: 376 LFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGA 435
Query: 567 IKQGMVIHGYAIKTGCVADVTFLNALITMYCNCGSTNDGRLCLLLFQMGDKREISLWNAI 626
+ G +H T + + ALI MY CGS + R LF + K+ WN +
Sbjct: 436 LSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEAR---RLFDLMTKKNEVTWNTM 492
Query: 627 ISVYVQTNKAKQAVAFFTELLGAGLEPDNVTVLSII----SAGVLINSLNLTHSLMAFVI 682
IS Y + ++A+ F E+L +G+ P VT L ++ AG++ + +S+ +
Sbjct: 493 ISGYGLHGQGQEALNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEGDEIFNSM---IH 549
Query: 683 RKGLDKHVAVSNALMDSYVRCGNISMARKLFGSLIYKDAFS-WSVMINGYGLYGDGEAAL 741
R G + V ++D R G++ A + ++ + S W ++ ++ D A
Sbjct: 550 RYGFEPSVKHYACMVDILGRAGHLQRALQFIEAMSIEPGSSVWETLLGACRIHKDTNLAR 609
Query: 742 ELFKQMQLSGVRPNEITYLGVLS 764
+ + +L + P+ + Y +LS
Sbjct: 610 TVSE--KLFELDPDNVGYHVLLS 630
Score = 213 bits (541), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 155/569 (27%), Positives = 271/569 (47%), Gaps = 36/569 (6%)
Query: 104 FPIIKKPCVFLQNLMIRGLS-NCGLHADLLHVYIKCRLS-GCPSDDFTFPFLIKACSSLS 161
F +++P VFL N+++RG S N H+ L V+ R S + T+ F I A S
Sbjct: 75 FLSVQRPDVFLFNVLMRGFSVNESPHSS-LSVFAHLRKSTDLKPNSSTYAFAISAASGFR 133
Query: 162 DLRIGREIHCVIFRTGYHQNLVIQTALVDFYAKKGEMLTARLLFDQIPLADLVSCNTLMA 221
D R GR IH G L++ + +V Y K + AR +FD++P D + NT+++
Sbjct: 134 DDRAGRVIHGQAVVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMIS 193
Query: 222 GYSFNGLDQEALETFRRILTVG-LKPNVSTFSSVIPVCTRLGHFCFGKSLHGFTIKSGYL 280
GY N + E+++ FR ++ + + +T ++P L G +H K+G
Sbjct: 194 GYRKNEMYVESIQVFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCY 253
Query: 281 FDDFLVPALISMYAGDLDLSTARKLFDSLLEKNASVWNAMISAYTQSKKFFEAFEIFRQM 340
D+++ IS+Y+ + LF + + +NAMI YT + + + +F+++
Sbjct: 254 SHDYVLTGFISLYSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKEL 313
Query: 341 IRAEMQPDLVTFVSIIP---------SCENYCSFQCGESLTACVIKNGLGNQPSVLTALL 391
+ + + T VS++P + YC +K+ + SV TAL
Sbjct: 314 MLSGARLRSSTLVSLVPVSGHLMLIYAIHGYC------------LKSNFLSHASVSTALT 361
Query: 392 SMYAKLGNIDSAKFLFDQIPNRNLLCWNAMMSAYVRNRFWDASLAVFRQMQFAGLNPDAV 451
++Y+KL I+SA+ LFD+ P ++L WNAM+S Y +N + ++++FR+MQ + +P+ V
Sbjct: 362 TVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPV 421
Query: 452 SIISVLSGCSKLDDVLLGKSAHAFSLRKGIVSNLDVLNALLMFYSDGGQFSYAFTLFHRM 511
+I +LS C++L + LGK H S++ V AL+ Y+ G + A LF M
Sbjct: 422 TITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLM 481
Query: 512 STRSSVSWNTLISRCVQNGAVEEAVILLQRMQKEGVELDMVTLISFLPNLNKNGNIKQGM 571
+ ++ V+WNT+IS +G +EA+ + M G+ VT + L + G +K+G
Sbjct: 482 TKKNEVTWNTMISGYGLHGQGQEALNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEGD 541
Query: 572 VIHGYAI-KTGCVADVTFLNALITMYCNCGSTNDGRLCLLLFQMGDKREISLWNAIIS-- 628
I I + G V ++ + G R + M + S+W ++
Sbjct: 542 EIFNSMIHRYGFEPSVKHYACMVDILGRAGHLQ--RALQFIEAMSIEPGSSVWETLLGAC 599
Query: 629 -VYVQTNKAKQAVAFFTELLGAGLEPDNV 656
++ TN A+ E L+PDNV
Sbjct: 600 RIHKDTNLARTVSEKLFE-----LDPDNV 623
>sp|Q84MA3|PP345_ARATH Pentatricopeptide repeat-containing protein At4g32430,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E40 PE=2
SV=1
Length = 763
Score = 343 bits (881), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 204/641 (31%), Positives = 347/641 (54%), Gaps = 22/641 (3%)
Query: 267 GKSLHGFTIKSGYLFDDFLVPALISMYAGDLDLSTARKLFDSLLEKNASVWNAMISAYTQ 326
G +HGF+ SG+ + A++ MY A +F++L++ + WN ++S +
Sbjct: 95 GCQIHGFSTTSGFTSFVCVSNAVMGMYRKAGRFDNALCIFENLVDPDVVSWNTILSGFDD 154
Query: 327 SKKFFEAFEIFRQMIRAEMQPDLVTFVSIIPSCENYCSFQCGESLTACVIKNGLGNQPSV 386
++ A +M A + D T+ + + C F G L + V+K GL + V
Sbjct: 155 NQI---ALNFVVRMKSAGVVFDAFTYSTALSFCVGSEGFLLGLQLQSTVVKTGLESDLVV 211
Query: 387 LTALLSMYAKLGNIDSAKFLFDQIPNRNLLCWNAMMSAYVRN-RFWDASLAVFRQMQFAG 445
+ ++MY++ G+ A+ +FD++ ++++ WN+++S + F ++ +FR M G
Sbjct: 212 GNSFITMYSRSGSFRGARRVFDEMSFKDMISWNSLLSGLSQEGTFGFEAVVIFRDMMREG 271
Query: 446 LNPDAVSIISVLSGCSKLDDVLLGKSAHAFSLRKGIVSNLDVLNALLMFYSDGGQFSYAF 505
+ D VS SV++ C D+ L + H +++G S L+V N L+ YS G
Sbjct: 272 VELDHVSFTSVITTCCHETDLKLARQIHGLCIKRGYESLLEVGNILMSRYSKCGVLEAVK 331
Query: 506 TLFHRMSTRSSVSWNTLISRCVQNGAVEEAVILLQRMQKEGVELDMVTLISFLPNLNKNG 565
++FH+MS R+ VSW T+IS ++AV + M+ +GV + VT + + + N
Sbjct: 332 SVFHQMSERNVVSWTTMIS-----SNKDDAVSIFLNMRFDGVYPNEVTFVGLINAVKCNE 386
Query: 566 NIKQGMVIHGYAIKTGCVADVTFLNALITMYCNCGSTNDGRLCLLLFQMGDKREISLWNA 625
IK+G+ IHG IKTG V++ + N+ IT+Y + D + F+ REI WNA
Sbjct: 387 QIKEGLKIHGLCIKTGFVSEPSVGNSFITLYAKFEALEDAKKA---FEDITFREIISWNA 443
Query: 626 IISVYVQTNKAKQAVAFFTELLGAGLE--PDNVTVLSIISAGVLINSLNLTHSLM--AFV 681
+IS + Q + +A+ F L A E P+ T S+++A +++ A +
Sbjct: 444 MISGFAQNGFSHEALKMF---LSAAAETMPNEYTFGSVLNAIAFAEDISVKQGQRCHAHL 500
Query: 682 IRKGLDKHVAVSNALMDSYVRCGNISMARKLFGSLIYKDAFSWSVMINGYGLYGDGEAAL 741
++ GL+ VS+AL+D Y + GNI + K+F + K+ F W+ +I+ Y +GD E +
Sbjct: 501 LKLGLNSCPVVSSALLDMYAKRGNIDESEKVFNEMSQKNQFVWTSIISAYSSHGDFETVM 560
Query: 742 ELFKQMQLSGVRPNEITYLGVLSACSHAGLVEQSKMVFKSMVE-HGISQKMEHYACMVDL 800
LF +M V P+ +T+L VL+AC+ G+V++ +F M+E + + EHY+CMVD+
Sbjct: 561 NLFHKMIKENVAPDLVTFLSVLTACNRKGMVDKGYEIFNMMIEVYNLEPSHEHYSCMVDM 620
Query: 801 LGRTGHLNEAFIFVKKLPCKPSVSILESLLGACRIHGNVELGEIISGMLFEMDPENPGSY 860
LGR G L EA + ++P P S+L+S+LG+CR+HGNV++G ++ + EM PE GSY
Sbjct: 621 LGRAGRLKEAEELMSEVPGGPGESMLQSMLGSCRLHGNVKMGAKVAELAMEMKPELSGSY 680
Query: 861 VMLHNIYASAGRWEDAYRVRSCMKRSRLKKVPGFSL--VGD 899
V ++NIYA W+ A +R M++ + K GFS VGD
Sbjct: 681 VQMYNIYAEKEEWDKAAEIRKAMRKKNVSKEAGFSWIDVGD 721
Score = 206 bits (524), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 141/525 (26%), Positives = 257/525 (48%), Gaps = 23/525 (4%)
Query: 146 DDFTFPFLIKACSSLSDLRIGREIHCVIFRTGYHQNLVIQTALVDFYAKKGEMLTARLLF 205
D+ T +KAC DL+ G +IH +G+ + + A++ Y K G A +F
Sbjct: 77 DEVTLCLALKACRG--DLKRGCQIHGFSTTSGFTSFVCVSNAVMGMYRKAGRFDNALCIF 134
Query: 206 DQIPLADLVSCNTLMAGYSFNGLDQEALETFRRILTVGLKPNVSTFSSVIPVCTRLGHFC 265
+ + D+VS NT+++G+ N Q AL R+ + G+ + T+S+ + C F
Sbjct: 135 ENLVDPDVVSWNTILSGFDDN---QIALNFVVRMKSAGVVFDAFTYSTALSFCVGSEGFL 191
Query: 266 FGKSLHGFTIKSGYLFDDFLVPALISMYAGDLDLSTARKLFDSLLEKNASVWNAMISAYT 325
G L +K+G D + + I+MY+ AR++FD + K+ WN+++S +
Sbjct: 192 LGLQLQSTVVKTGLESDLVVGNSFITMYSRSGSFRGARRVFDEMSFKDMISWNSLLSGLS 251
Query: 326 QSKKF-FEAFEIFRQMIRAEMQPDLVTFVSIIPSCENYCSFQCGESLTACVIKNGLGNQP 384
Q F FEA IFR M+R ++ D V+F S+I +C + + + IK G +
Sbjct: 252 QEGTFGFEAVVIFRDMMREGVELDHVSFTSVITTCCHETDLKLARQIHGLCIKRGYESLL 311
Query: 385 SVLTALLSMYAKLGNIDSAKFLFDQIPNRNLLCWNAMMSAYVRNRFWDASLAVFRQMQFA 444
V L+S Y+K G +++ K +F Q+ RN++ W M+S+ N+ D ++++F M+F
Sbjct: 312 EVGNILMSRYSKCGVLEAVKSVFHQMSERNVVSWTTMISS---NK--DDAVSIFLNMRFD 366
Query: 445 GLNPDAVSIISVLSGCSKLDDVLLGKSAHAFSLRKGIVSNLDVLNALLMFYSDGGQFSYA 504
G+ P+ V+ + +++ + + G H ++ G VS V N+ + Y+ A
Sbjct: 367 GVYPNEVTFVGLINAVKCNEQIKEGLKIHGLCIKTGFVSEPSVGNSFITLYAKFEALEDA 426
Query: 505 FTLFHRMSTRSSVSWNTLISRCVQNGAVEEAVILL-----QRMQKEGVELDMVTLISFLP 559
F ++ R +SWN +IS QNG EA+ + + M E ++ I+F
Sbjct: 427 KKAFEDITFREIISWNAMISGFAQNGFSHEALKMFLSAAAETMPNEYTFGSVLNAIAFAE 486
Query: 560 NLNKNGNIKQGMVIHGYAIKTGCVADVTFLNALITMYCNCGSTNDGRLCLLLFQMGDKRE 619
++ ++KQG H + +K G + +AL+ MY G+ ++ + +M K +
Sbjct: 487 DI----SVKQGQRCHAHLLKLGLNSCPVVSSALLDMYAKRGNIDESE--KVFNEMSQKNQ 540
Query: 620 ISLWNAIISVYVQTNKAKQAVAFFTELLGAGLEPDNVTVLSIISA 664
+W +IIS Y + + F +++ + PD VT LS+++A
Sbjct: 541 F-VWTSIISAYSSHGDFETVMNLFHKMIKENVAPDLVTFLSVLTA 584
Score = 192 bits (489), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 138/484 (28%), Positives = 236/484 (48%), Gaps = 21/484 (4%)
Query: 100 ALSSFPIIKKPCVFLQNLMIRGLSNCGLHADLLHVYIKCRLSGCPSDDFTFPFLIKACSS 159
AL F + P V N ++ G + + L+ ++ + +G D FT+ + C
Sbjct: 130 ALCIFENLVDPDVVSWNTILSGFDDNQI---ALNFVVRMKSAGVVFDAFTYSTALSFCVG 186
Query: 160 LSDLRIGREIHCVIFRTGYHQNLVIQTALVDFYAKKGEMLTARLLFDQIPLADLVSCNTL 219
+G ++ + +TG +LV+ + + Y++ G AR +FD++ D++S N+L
Sbjct: 187 SEGFLLGLQLQSTVVKTGLESDLVVGNSFITMYSRSGSFRGARRVFDEMSFKDMISWNSL 246
Query: 220 MAGYSFNG-LDQEALETFRRILTVGLKPNVSTFSSVIPVCTRLGHFCFGKSLHGFTIKSG 278
++G S G EA+ FR ++ G++ + +F+SVI C + +HG IK G
Sbjct: 247 LSGLSQEGTFGFEAVVIFRDMMREGVELDHVSFTSVITTCCHETDLKLARQIHGLCIKRG 306
Query: 279 YLFDDFLVPALISMYAGDLDLSTARKLFDSLLEKNASVWNAMISAYTQSKKFFEAFEIFR 338
Y + L+S Y+ L + +F + E+N W MIS+ +A IF
Sbjct: 307 YESLLEVGNILMSRYSKCGVLEAVKSVFHQMSERNVVSWTTMISSNKD-----DAVSIFL 361
Query: 339 QMIRAEMQPDLVTFVSIIPSCENYCSFQCGESLT--ACVIKNGLGNQPSVLTALLSMYAK 396
M + P+ VTFV +I + + C+ Q E L IK G ++PSV + +++YAK
Sbjct: 362 NMRFDGVYPNEVTFVGLINAVK--CNEQIKEGLKIHGLCIKTGFVSEPSVGNSFITLYAK 419
Query: 397 LGNIDSAKFLFDQIPNRNLLCWNAMMSAYVRNRFWDASLAVFRQMQFAGLNPDAVSIISV 456
++ AK F+ I R ++ WNAM+S + +N F +L +F A P+ + SV
Sbjct: 420 FEALEDAKKAFEDITFREIISWNAMISGFAQNGFSHEALKMFLSAA-AETMPNEYTFGSV 478
Query: 457 LSGCSKLDDVLL--GKSAHAFSLRKGIVSNLDVLNALLMFYSDGGQFSYAFTLFHRMSTR 514
L+ + +D+ + G+ HA L+ G+ S V +ALL Y+ G + +F+ MS +
Sbjct: 479 LNAIAFAEDISVKQGQRCHAHLLKLGLNSCPVVSSALLDMYAKRGNIDESEKVFNEMSQK 538
Query: 515 SSVSWNTLISRCVQNGAVEEAVILLQRMQKEGVELDMVTLISFLPNLNKNGNIKQGMVIH 574
+ W ++IS +G E + L +M KE V D+VT +S L N ++GMV
Sbjct: 539 NQFVWTSIISAYSSHGDFETVMNLFHKMIKENVAPDLVTFLSVLTACN-----RKGMVDK 593
Query: 575 GYAI 578
GY I
Sbjct: 594 GYEI 597
Score = 138 bits (347), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 104/368 (28%), Positives = 175/368 (47%), Gaps = 18/368 (4%)
Query: 403 AKFLFDQIPNRN-LLCWNAMMSAYVRNRFWDASLAVFR---QMQFAGLNPDAVSIISVLS 458
A LFD RN N +S +R +L++F+ Q+ + G + D V++ L
Sbjct: 27 AHKLFDGSSQRNATTSINHSISESLRRNSPARALSIFKENLQLGYFGRHMDEVTLCLALK 86
Query: 459 GCSKLDDVLLGKSAHAFSLRKGIVSNLDVLNALLMFYSDGGQFSYAFTLFHRMSTRSSVS 518
C D+ G H FS G S + V NA++ Y G+F A +F + VS
Sbjct: 87 ACR--GDLKRGCQIHGFSTTSGFTSFVCVSNAVMGMYRKAGRFDNALCIFENLVDPDVVS 144
Query: 519 WNTLISRCVQNGAVEEAVILLQRMQKEGVELDMVTLISFLPNLNKNGNIKQGMVIHGYAI 578
WNT++S N + A+ + RM+ GV D T + L + G+ + +
Sbjct: 145 WNTILSGFDDN---QIALNFVVRMKSAGVVFDAFTYSTALSFCVGSEGFLLGLQLQSTVV 201
Query: 579 KTGCVADVTFLNALITMYCNCGSTNDGRLCLLLFQMGDKREISLWNAIISVYVQTNK-AK 637
KTG +D+ N+ ITMY GS R + +M K IS WN+++S Q
Sbjct: 202 KTGLESDLVVGNSFITMYSRSGSFRGAR--RVFDEMSFKDMIS-WNSLLSGLSQEGTFGF 258
Query: 638 QAVAFFTELLGAGLEPDNVTVLSIISAGVLINSLNLTHSLMAFVIRKGLDKHVAVSNALM 697
+AV F +++ G+E D+V+ S+I+ L L + I++G + + V N LM
Sbjct: 259 EAVVIFRDMMREGVELDHVSFTSVITTCCHETDLKLARQIHGLCIKRGYESLLEVGNILM 318
Query: 698 DSYVRCGNISMARKLFGSLIYKDAFSWSVMINGYGLYGDGEAALELFKQMQLSGVRPNEI 757
Y +CG + + +F + ++ SW+ MI+ + + A+ +F M+ GV PNE+
Sbjct: 319 SRYSKCGVLEAVKSVFHQMSERNVVSWTTMIS-----SNKDDAVSIFLNMRFDGVYPNEV 373
Query: 758 TYLGVLSA 765
T++G+++A
Sbjct: 374 TFVGLINA 381
Score = 117 bits (293), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 74/290 (25%), Positives = 137/290 (47%), Gaps = 14/290 (4%)
Query: 130 DLLHVYIKCRLSGCPSDDFTFPFLIKACSSLSDLRIGREIHCVIFRTGYHQNLVIQTALV 189
D + +++ R G ++ TF LI A ++ G +IH + +TG+ + + +
Sbjct: 355 DAVSIFLNMRFDGVYPNEVTFVGLINAVKCNEQIKEGLKIHGLCIKTGFVSEPSVGNSFI 414
Query: 190 DFYAKKGEMLTARLLFDQIPLADLVSCNTLMAGYSFNGLDQEALETFRRILTVGLKPNVS 249
YAK + A+ F+ I +++S N +++G++ NG EAL+ F + PN
Sbjct: 415 TLYAKFEALEDAKKAFEDITFREIISWNAMISGFAQNGFSHEALKMFLSAAAETM-PNEY 473
Query: 250 TFSSVI-------PVCTRLGHFCFGKSLHGFTIKSGYLFDDFLVPALISMYAGDLDLSTA 302
TF SV+ + + G C H +K G + AL+ MYA ++ +
Sbjct: 474 TFGSVLNAIAFAEDISVKQGQRC-----HAHLLKLGLNSCPVVSSALLDMYAKRGNIDES 528
Query: 303 RKLFDSLLEKNASVWNAMISAYTQSKKFFEAFEIFRQMIRAEMQPDLVTFVSIIPSCENY 362
K+F+ + +KN VW ++ISAY+ F +F +MI+ + PDLVTF+S++ +C
Sbjct: 529 EKVFNEMSQKNQFVWTSIISAYSSHGDFETVMNLFHKMIKENVAPDLVTFLSVLTACNRK 588
Query: 363 CSFQCGESLTACVIK-NGLGNQPSVLTALLSMYAKLGNIDSAKFLFDQIP 411
G + +I+ L + ++ M + G + A+ L ++P
Sbjct: 589 GMVDKGYEIFNMMIEVYNLEPSHEHYSCMVDMLGRAGRLKEAEELMSEVP 638
>sp|Q9S7F4|PP206_ARATH Putative pentatricopeptide repeat-containing protein At2g01510
OS=Arabidopsis thaliana GN=PCMP-H36 PE=3 SV=1
Length = 825
Score = 343 bits (880), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 202/618 (32%), Positives = 326/618 (52%), Gaps = 15/618 (2%)
Query: 289 LISMYAGDLDLSTARKLFDSLLEKNASVWNAMISAYTQSKKFFEAFEIFRQMIRAE--MQ 346
+IS + D+S+AR LFD++ ++ W ++ Y ++ F EAF++FRQM R+
Sbjct: 85 MISGHVKTGDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTL 144
Query: 347 PDLVTFVSIIPSCENYCSFQCGESLTACVIKNGLGNQP--SVLTALLSMYAKLGNIDSAK 404
PD VTF +++P C + + A +K G P +V LL Y ++ +D A
Sbjct: 145 PDHVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLAC 204
Query: 405 FLFDQIPNRNLLCWNAMMSAYVRNRFWDASLAVFRQMQFAGLNPDAVSIISVLSGCSKLD 464
LF++IP ++ + +N +++ Y ++ + S+ +F +M+ +G P + VL L
Sbjct: 205 VLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLH 264
Query: 465 DVLLGKSAHAFSLRKGIVSNLDVLNALLMFYSDGGQFSYAFTLFHRMSTRSSVSWNTLIS 524
D LG+ HA S+ G + V N +L FYS + LF M VS+N +IS
Sbjct: 265 DFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVIS 324
Query: 525 RCVQNGAVEEAVILLQRMQKEGVE---LDMVTLISFLPNLNKNGNIKQGMVIHGYAIKTG 581
Q E ++ + MQ G + T++S NL+ +++ G +H A+
Sbjct: 325 SYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLS---SLQMGRQLHCQALLAT 381
Query: 582 CVADVTFLNALITMYCNCGSTNDGRLCLLLFQMGDKREISLWNAIISVYVQTNKAKQAVA 641
+ + N+L+ MY C + L +F+ +R W A+IS YVQ +
Sbjct: 382 ADSILHVGNSLVDMYAKCEMFEEAEL---IFKSLPQRTTVSWTALISGYVQKGLHGAGLK 438
Query: 642 FFTELLGAGLEPDNVTVLSIISAGVLINSLNLTHSLMAFVIRKGLDKHVAVSNALMDSYV 701
FT++ G+ L D T +++ A SL L L AF+IR G ++V + L+D Y
Sbjct: 439 LFTKMRGSNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYA 498
Query: 702 RCGNISMARKLFGSLIYKDAFSWSVMINGYGLYGDGEAALELFKQMQLSGVRPNEITYLG 761
+CG+I A ++F + ++A SW+ +I+ + GDGEAA+ F +M SG++P+ ++ LG
Sbjct: 499 KCGSIKDAVQVFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDSVSILG 558
Query: 762 VLSACSHAGLVEQSKMVFKSMVE-HGISQKMEHYACMVDLLGRTGHLNEAFIFVKKLPCK 820
VL+ACSH G VEQ F++M +GI+ K +HYACM+DLLGR G EA + ++P +
Sbjct: 559 VLTACSHCGFVEQGTEYFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPFE 618
Query: 821 PSVSILESLLGACRIHGNVELGEIISGMLFEMDP-ENPGSYVMLHNIYASAGRWEDAYRV 879
P + S+L ACRIH N L E + LF M+ + +YV + NIYA+AG WE V
Sbjct: 619 PDEIMWSSVLNACRIHKNQSLAERAAEKLFSMEKLRDAAAYVSMSNIYAAAGEWEKVRDV 678
Query: 880 RSCMKRSRLKKVPGFSLV 897
+ M+ +KKVP +S V
Sbjct: 679 KKAMRERGIKKVPAYSWV 696
Score = 225 bits (573), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 162/624 (25%), Positives = 296/624 (47%), Gaps = 23/624 (3%)
Query: 179 HQNLVIQTALVDFYAKKGEMLTARLLFDQIPLADLVSCNTLMAGYSFNGLDQEALETFRR 238
H+N V ++ + K G++ +AR LFD +P +V+ LM Y+ N EA + FR+
Sbjct: 76 HKNTVSTNTMISGHVKTGDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQ 135
Query: 239 ILTVG--LKPNVSTFSSVIPVCTRLGHFCFGKSLHGFTIKSGYLFDDFLVPA--LISMYA 294
+ P+ TF++++P C +H F +K G+ + FL + L+ Y
Sbjct: 136 MCRSSSCTLPDHVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYC 195
Query: 295 GDLDLSTARKLFDSLLEKNASVWNAMISAYTQSKKFFEAFEIFRQMIRAEMQPDLVTFVS 354
L A LF+ + EK++ +N +I+ Y + + E+ +F +M ++ QP TF
Sbjct: 196 EVRRLDLACVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSG 255
Query: 355 IIPSCENYCSFQCGESLTACVIKNGLGNQPSVLTALLSMYAKLGNIDSAKFLFDQIPNRN 414
++ + F G+ L A + G SV +L Y+K + + LFD++P +
Sbjct: 256 VLKAVVGLHDFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELD 315
Query: 415 LLCWNAMMSAYVRNRFWDASLAVFRQMQFAGLNPDAVSIISVLSGCSKLDDVLLGKSAHA 474
+ +N ++S+Y + ++ASL FR+MQ G + ++LS + L + +G+ H
Sbjct: 316 FVSYNVVISSYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHC 375
Query: 475 FSLRKGIVSNLDVLNALLMFYSDGGQFSYAFTLFHRMSTRSSVSWNTLISRCVQNGAVEE 534
+L S L V N+L+ Y+ F A +F + R++VSW LIS VQ G
Sbjct: 376 QALLATADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGA 435
Query: 535 AVILLQRMQKEGVELDMVTLISFLPNLNKNGNIKQGMVIHGYAIKTGCVADVTFLNALIT 594
+ L +M+ + D T + L ++ G +H + I++G + +V + L+
Sbjct: 436 GLKLFTKMRGSNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSGLVD 495
Query: 595 MYCNCGSTNDGRLCLLLFQMGDKREISLWNAIISVYVQTNKAKQAVAFFTELLGAGLEPD 654
MY CGS D + +M D+ +S WNA+IS + + A+ F +++ +GL+PD
Sbjct: 496 MYAKCGSIKDA--VQVFEEMPDRNAVS-WNALISAHADNGDGEAAIGAFAKMIESGLQPD 552
Query: 655 NVTVLSIISA----GVLINSLNLTHSLMAFVIRKGLDKHVAVSNALMDSYVRCGNISMAR 710
+V++L +++A G + ++ KH A ++D R G + A
Sbjct: 553 SVSILGVLTACSHCGFVEQGTEYFQAMSPIYGITPKKKHYA---CMLDLLGRNGRFAEAE 609
Query: 711 KLFGSLIYK-DAFSWSVMINGYGLYGDG----EAALELFKQMQLSGVRPNEITYLGVLSA 765
KL + ++ D WS ++N ++ + AA +LF +L + Y+ + +
Sbjct: 610 KLMDEMPFEPDEIMWSSVLNACRIHKNQSLAERAAEKLFSMEKLR----DAAAYVSMSNI 665
Query: 766 CSHAGLVEQSKMVFKSMVEHGISQ 789
+ AG E+ + V K+M E GI +
Sbjct: 666 YAAAGEWEKVRDVKKAMRERGIKK 689
Score = 196 bits (499), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 125/468 (26%), Positives = 232/468 (49%), Gaps = 8/468 (1%)
Query: 116 NLMIRGLSNCGLHADLLHVYIKCRLSGCPSDDFTFPFLIKACSSLSDLRIGREIHCVIFR 175
N +I G GL+ + +H+++K R SG DFTF ++KA L D +G+++H +
Sbjct: 219 NTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQLHALSVT 278
Query: 176 TGYHQNLVIQTALVDFYAKKGEMLTARLLFDQIPLADLVSCNTLMAGYSFNGLDQEALET 235
TG+ ++ + ++DFY+K +L R+LFD++P D VS N +++ YS + +L
Sbjct: 279 TGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQYEASLHF 338
Query: 236 FRRILTVGLKPNVSTFSSVIPVCTRLGHFCFGKSLHGFTIKSGYLFDDFLVPALISMYAG 295
FR + +G F++++ + L G+ LH + + + +L+ MYA
Sbjct: 339 FREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADSILHVGNSLVDMYAK 398
Query: 296 DLDLSTARKLFDSLLEKNASVWNAMISAYTQSKKFFEAFEIFRQMIRAEMQPDLVTFVSI 355
A +F SL ++ W A+IS Y Q ++F +M + ++ D TF ++
Sbjct: 399 CEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQSTFATV 458
Query: 356 IPSCENYCSFQCGESLTACVIKNGLGNQPSVLTALLSMYAKLGNIDSAKFLFDQIPNRNL 415
+ + ++ S G+ L A +I++G + L+ MYAK G+I A +F+++P+RN
Sbjct: 459 LKASASFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNA 518
Query: 416 LCWNAMMSAYVRNRFWDASLAVFRQMQFAGLNPDAVSIISVLSGCSKLDDVLLGKSA-HA 474
+ WNA++SA+ N +A++ F +M +GL PD+VSI+ VL+ CS V G A
Sbjct: 519 VSWNALISAHADNGDGEAAIGAFAKMIESGLQPDSVSILGVLTACSHCGFVEQGTEYFQA 578
Query: 475 FSLRKGIVSNLDVLNALLMFYSDGGQFSYAFTLFHRMS-TRSSVSWNTLISRCV--QNGA 531
S GI +L G+F+ A L M + W+++++ C +N +
Sbjct: 579 MSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSVLNACRIHKNQS 638
Query: 532 V----EEAVILLQRMQKEGVELDMVTLISFLPNLNKNGNIKQGMVIHG 575
+ E + +++++ + M + + K ++K+ M G
Sbjct: 639 LAERAAEKLFSMEKLRDAAAYVSMSNIYAAAGEWEKVRDVKKAMRERG 686
Score = 48.5 bits (114), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 42/74 (56%)
Query: 674 THSLMAFVIRKGLDKHVAVSNALMDSYVRCGNISMARKLFGSLIYKDAFSWSVMINGYGL 733
T + A +I+ G D SN +++ +R G +S ARK++ + +K+ S + MI+G+
Sbjct: 32 TRRVDARIIKTGFDTDTCRSNFIVEDLLRRGQVSAARKVYDEMPHKNTVSTNTMISGHVK 91
Query: 734 YGDGEAALELFKQM 747
GD +A +LF M
Sbjct: 92 TGDVSSARDLFDAM 105
>sp|O04659|PP398_ARATH Pentatricopeptide repeat-containing protein At5g27110
OS=Arabidopsis thaliana GN=PCMP-E14 PE=2 SV=2
Length = 691
Score = 341 bits (875), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 200/634 (31%), Positives = 342/634 (53%), Gaps = 7/634 (1%)
Query: 268 KSLHGFTIKSGYLFDDFLVPALISMYAGDLDLSTARKLFDSL-LEKNASVWNAMISAYTQ 326
K +H + G D L +LI++Y D +AR +F++ + + +WN+++S Y++
Sbjct: 24 KLVHQRILTLGLRRDVVLCKSLINVYFTCKDHCSARHVFENFDIRSDVYIWNSLMSGYSK 83
Query: 327 SKKFFEAFEIFRQMIRAEM-QPDLVTFVSIIPSCENYCSFQCGESLTACVIKNGLGNQPS 385
+ F + E+F++++ + PD TF ++I + G + V+K+G
Sbjct: 84 NSMFHDTLEVFKRLLNCSICVPDSFTFPNVIKAYGALGREFLGRMIHTLVVKSGYVCDVV 143
Query: 386 VLTALLSMYAKLGNIDSAKFLFDQIPNRNLLCWNAMMSAYVRNRFWDASLAVFRQMQFAG 445
V ++L+ MYAK +++ +FD++P R++ WN ++S + ++ + +L +F +M+ +G
Sbjct: 144 VASSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVISCFYQSGEAEKALELFGRMESSG 203
Query: 446 LNPDAVSIISVLSGCSKLDDVLLGKSAHAFSLRKGIVSNLDVLNALLMFYSDGGQFSYAF 505
P++VS+ +S CS+L + GK H ++KG + V +AL+ Y A
Sbjct: 204 FEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFELDEYVNSALVDMYGKCDCLEVAR 263
Query: 506 TLFHRMSTRSSVSWNTLISRCVQNGAVEEAVILLQRMQKEGVELDMVTLISFLPNLNKNG 565
+F +M +S V+WN++I V G + V +L RM EG TL S L +++
Sbjct: 264 EVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEGTRPSQTTLTSILMACSRSR 323
Query: 566 NIKQGMVIHGYAIKTGCVADVTFLNALITMYCNCGSTNDGRLCLLLFQMGDKREISLWNA 625
N+ G IHGY I++ AD+ +LI +Y CG N L +F K WN
Sbjct: 324 NLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCGEAN---LAETVFSKTQKDVAESWNV 380
Query: 626 IISVYVQTNKAKQAVAFFTELLGAGLEPDNVTVLSIISAGVLINSLNLTHSLMAFVIRKG 685
+IS Y+ +AV + +++ G++PD VT S++ A + +L + +
Sbjct: 381 MISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPACSQLAALEKGKQIHLSISESR 440
Query: 686 LDKHVAVSNALMDSYVRCGNISMARKLFGSLIYKDAFSWSVMINGYGLYGDGEAALELFK 745
L+ + +AL+D Y +CGN A ++F S+ KD SW+VMI+ YG +G AL F
Sbjct: 441 LETDELLLSALLDMYSKCGNEKEAFRIFNSIPKKDVVSWTVMISAYGSHGQPREALYQFD 500
Query: 746 QMQLSGVRPNEITYLGVLSACSHAGLVEQSKMVFKSM-VEHGISQKMEHYACMVDLLGRT 804
+MQ G++P+ +T L VLSAC HAGL+++ F M ++GI +EHY+CM+D+LGR
Sbjct: 501 EMQKFGLKPDGVTLLAVLSACGHAGLIDEGLKFFSQMRSKYGIEPIIEHYSCMIDILGRA 560
Query: 805 GHLNEAFIFVKKLP-CKPSVSILESLLGACRIHGNVELGEIISGMLFEMDPENPGSYVML 863
G L EA+ +++ P + +L +L AC +H LG+ I+ +L E P++ +Y++L
Sbjct: 561 GRLLEAYEIIQQTPETSDNAELLSTLFSACCLHLEHSLGDRIARLLVENYPDDASTYMVL 620
Query: 864 HNIYASAGRWEDAYRVRSCMKRSRLKKVPGFSLV 897
N+YAS W+ A RVR MK L+K PG S +
Sbjct: 621 FNLYASGESWDAARRVRLKMKEMGLRKKPGCSWI 654
Score = 242 bits (617), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 145/515 (28%), Positives = 271/515 (52%), Gaps = 6/515 (1%)
Query: 153 LIKACS-SLSDLRIGREIHCVIFRTGYHQNLVIQTALVDFYAKKGEMLTARLLFDQIPL- 210
L++ C+ S LR + +H I G +++V+ +L++ Y + +AR +F+ +
Sbjct: 9 LLRECTNSTKSLRRIKLVHQRILTLGLRRDVVLCKSLINVYFTCKDHCSARHVFENFDIR 68
Query: 211 ADLVSCNTLMAGYSFNGLDQEALETFRRILTVGL-KPNVSTFSSVIPVCTRLGHFCFGKS 269
+D+ N+LM+GYS N + + LE F+R+L + P+ TF +VI LG G+
Sbjct: 69 SDVYIWNSLMSGYSKNSMFHDTLEVFKRLLNCSICVPDSFTFPNVIKAYGALGREFLGRM 128
Query: 270 LHGFTIKSGYLFDDFLVPALISMYAGDLDLSTARKLFDSLLEKNASVWNAMISAYTQSKK 329
+H +KSGY+ D + +L+ MYA + ++FD + E++ + WN +IS + QS +
Sbjct: 129 IHTLVVKSGYVCDVVVASSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVISCFYQSGE 188
Query: 330 FFEAFEIFRQMIRAEMQPDLVTFVSIIPSCENYCSFQCGESLTACVIKNGLGNQPSVLTA 389
+A E+F +M + +P+ V+ I +C + G+ + +K G V +A
Sbjct: 189 AEKALELFGRMESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFELDEYVNSA 248
Query: 390 LLSMYAKLGNIDSAKFLFDQIPNRNLLCWNAMMSAYVRNRFWDASLAVFRQMQFAGLNPD 449
L+ MY K ++ A+ +F ++P ++L+ WN+M+ YV + + + +M G P
Sbjct: 249 LVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEGTRPS 308
Query: 450 AVSIISVLSGCSKLDDVLLGKSAHAFSLRKGIVSNLDVLNALLMFYSDGGQFSYAFTLFH 509
++ S+L CS+ ++L GK H + +R + +++ V +L+ Y G+ + A T+F
Sbjct: 309 QTTLTSILMACSRSRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCGEANLAETVFS 368
Query: 510 RMSTRSSVSWNTLISRCVQNGAVEEAVILLQRMQKEGVELDMVTLISFLPNLNKNGNIKQ 569
+ + SWN +IS + G +AV + +M GV+ D+VT S LP ++ +++
Sbjct: 369 KTQKDVAESWNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPACSQLAALEK 428
Query: 570 GMVIHGYAIKTGCVADVTFLNALITMYCNCGSTNDGRLCLLLFQMGDKREISLWNAIISV 629
G IH ++ D L+AL+ MY CG+ + +F K+++ W +IS
Sbjct: 429 GKQIHLSISESRLETDELLLSALLDMYSKCGNEKEA---FRIFNSIPKKDVVSWTVMISA 485
Query: 630 YVQTNKAKQAVAFFTELLGAGLEPDNVTVLSIISA 664
Y + ++A+ F E+ GL+PD VT+L+++SA
Sbjct: 486 YGSHGQPREALYQFDEMQKFGLKPDGVTLLAVLSA 520
Score = 228 bits (580), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 141/461 (30%), Positives = 235/461 (50%), Gaps = 1/461 (0%)
Query: 112 VFLQNLMIRGLSNCGLHADLLHVYIKC-RLSGCPSDDFTFPFLIKACSSLSDLRIGREIH 170
V++ N ++ G S + D L V+ + S C D FTFP +IKA +L +GR IH
Sbjct: 71 VYIWNSLMSGYSKNSMFHDTLEVFKRLLNCSICVPDSFTFPNVIKAYGALGREFLGRMIH 130
Query: 171 CVIFRTGYHQNLVIQTALVDFYAKKGEMLTARLLFDQIPLADLVSCNTLMAGYSFNGLDQ 230
++ ++GY ++V+ ++LV YAK + +FD++P D+ S NT+++ + +G +
Sbjct: 131 TLVVKSGYVCDVVVASSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVISCFYQSGEAE 190
Query: 231 EALETFRRILTVGLKPNVSTFSSVIPVCTRLGHFCFGKSLHGFTIKSGYLFDDFLVPALI 290
+ALE F R+ + G +PN + + I C+RL GK +H +K G+ D+++ AL+
Sbjct: 191 KALELFGRMESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFELDEYVNSALV 250
Query: 291 SMYAGDLDLSTARKLFDSLLEKNASVWNAMISAYTQSKKFFEAFEIFRQMIRAEMQPDLV 350
MY L AR++F + K+ WN+MI Y EI +MI +P
Sbjct: 251 DMYGKCDCLEVAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEGTRPSQT 310
Query: 351 TFVSIIPSCENYCSFQCGESLTACVIKNGLGNQPSVLTALLSMYAKLGNIDSAKFLFDQI 410
T SI+ +C + G+ + VI++ + V +L+ +Y K G + A+ +F +
Sbjct: 311 TLTSILMACSRSRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCGEANLAETVFSKT 370
Query: 411 PNRNLLCWNAMMSAYVRNRFWDASLAVFRQMQFAGLNPDAVSIISVLSGCSKLDDVLLGK 470
WN M+S+Y+ W ++ V+ QM G+ PD V+ SVL CS+L + GK
Sbjct: 371 QKDVAESWNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPACSQLAALEKGK 430
Query: 471 SAHAFSLRKGIVSNLDVLNALLMFYSDGGQFSYAFTLFHRMSTRSSVSWNTLISRCVQNG 530
H + ++ +L+ALL YS G AF +F+ + + VSW +IS +G
Sbjct: 431 QIHLSISESRLETDELLLSALLDMYSKCGNEKEAFRIFNSIPKKDVVSWTVMISAYGSHG 490
Query: 531 AVEEAVILLQRMQKEGVELDMVTLISFLPNLNKNGNIKQGM 571
EA+ MQK G++ D VTL++ L G I +G+
Sbjct: 491 QPREALYQFDEMQKFGLKPDGVTLLAVLSACGHAGLIDEGL 531
Score = 117 bits (294), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 72/262 (27%), Positives = 134/262 (51%)
Query: 98 HIALSSFPIIKKPCVFLQNLMIRGLSNCGLHADLLHVYIKCRLSGCPSDDFTFPFLIKAC 157
+A F + + + N MI+G G + + + + G T ++ AC
Sbjct: 260 EVAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEGTRPSQTTLTSILMAC 319
Query: 158 SSLSDLRIGREIHCVIFRTGYHQNLVIQTALVDFYAKKGEMLTARLLFDQIPLADLVSCN 217
S +L G+ IH + R+ + ++ + +L+D Y K GE A +F + S N
Sbjct: 320 SRSRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCGEANLAETVFSKTQKDVAESWN 379
Query: 218 TLMAGYSFNGLDQEALETFRRILTVGLKPNVSTFSSVIPVCTRLGHFCFGKSLHGFTIKS 277
+++ Y G +A+E + ++++VG+KP+V TF+SV+P C++L GK +H +S
Sbjct: 380 VMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPACSQLAALEKGKQIHLSISES 439
Query: 278 GYLFDDFLVPALISMYAGDLDLSTARKLFDSLLEKNASVWNAMISAYTQSKKFFEAFEIF 337
D+ L+ AL+ MY+ + A ++F+S+ +K+ W MISAY + EA F
Sbjct: 440 RLETDELLLSALLDMYSKCGNEKEAFRIFNSIPKKDVVSWTVMISAYGSHGQPREALYQF 499
Query: 338 RQMIRAEMQPDLVTFVSIIPSC 359
+M + ++PD VT ++++ +C
Sbjct: 500 DEMQKFGLKPDGVTLLAVLSAC 521
Score = 82.0 bits (201), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 73/313 (23%), Positives = 133/313 (42%), Gaps = 33/313 (10%)
Query: 92 FEITSYHIALSSFPIIKKPCVFLQNLMIRGLSNCGLHADLLHVYIKCRLSGCPSDDFTFP 151
F+ ++A + F +K N+MI + G + VY + G D TF
Sbjct: 355 FKCGEANLAETVFSKTQKDVAESWNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFT 414
Query: 152 FLIKACSSLSDLRIGREIHCVIFRTGYHQNLVIQTALVDFYAKKGEMLTARLLFDQIPLA 211
++ ACS L+ L G++IH I + + ++ +AL+D Y+K G A +F+ IP
Sbjct: 415 SVLPACSQLAALEKGKQIHLSISESRLETDELLLSALLDMYSKCGNEKEAFRIFNSIPKK 474
Query: 212 DLVSCNTLMAGYSFNGLDQEALETFRRILTVGLKPNVSTFSSVIPVCTRLGHFCFGKSLH 271
D+VS +++ Y +G +EAL F + GLKP+ T +V+ C H
Sbjct: 475 DVVSWTVMISAYGSHGQPREALYQFDEMQKFGLKPDGVTLLAVLSACG-----------H 523
Query: 272 GFTIKSGYLFDDFLVPALISMYAGDLDLSTARKLFDSLLEKNASVWNAMISAYTQSKKFF 331
I G F S R + +E ++ MI ++ +
Sbjct: 524 AGLIDEGLKF-----------------FSQMRSKYG--IEPIIEHYSCMIDILGRAGRLL 564
Query: 332 EAFEIFRQMIRAEMQPDLVTFVSIIPSCENYCSFQCGESLTACVIKNGLGNQPSVLTALL 391
EA+EI +Q +L++ ++ +C + G+ + +++N + S L
Sbjct: 565 EAYEIIQQTPETSDNAELLS--TLFSACCLHLEHSLGDRIARLLVEN-YPDDASTYMVLF 621
Query: 392 SMYAKLGNIDSAK 404
++YA + D+A+
Sbjct: 622 NLYASGESWDAAR 634
>sp|Q9LUS3|PP237_ARATH Pentatricopeptide repeat-containing protein At3g16610
OS=Arabidopsis thaliana GN=PCMP-E91 PE=2 SV=1
Length = 654
Score = 337 bits (865), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 202/657 (30%), Positives = 356/657 (54%), Gaps = 16/657 (2%)
Query: 251 FSSVIPVCTRLGHFCFGKSLHGFTIK-SGYLFDDFLVPALISMYAGDLDLSTARKLFDSL 309
F S++ C R + G+ +H +K S L ++ L +YA ++ AR +FD +
Sbjct: 2 FLSLLETCIRSRNLVLGQVIHQHLLKRSLTLSSSTVLVNLTRLYASCNEVELARHVFDEI 61
Query: 310 LEK--NASVWNAMISAYTQSKKFFEAFEIFRQMIRAEMQPDLVTFVSIIPSCENYCSFQC 367
N W+ MI AY + +A +++ +M+ + ++P T+ ++ +C +
Sbjct: 62 PHPRINPIAWDLMIRAYASNDFAEKALDLYYKMLNSGVRPTKYTYPFVLKACAGLRAIDD 121
Query: 368 GESLTACVIKNGLGNQPSVLTALLSMYAKLGNIDSAKFLFDQIPNRNLLCWNAMMSAYVR 427
G+ + + V + V TAL+ YAK G ++ A +FD++P R+++ WNAM+S +
Sbjct: 122 GKLIHSHVNCSDFATDMYVCTALVDFYAKCGELEMAIKVFDEMPKRDMVAWNAMISGFSL 181
Query: 428 NRFWDASLAVFRQMQ-FAGLNPDAVSIISVLSGCSKLDDVLLGKSAHAFSLRKGIVSNLD 486
+ + +F M+ GL+P+ +I+ + + + GK+ H + R G ++L
Sbjct: 182 HCCLTDVIGLFLDMRRIDGLSPNLSTIVGMFPALGRAGALREGKAVHGYCTRMGFSNDLV 241
Query: 487 VLNALLMFYSDGGQFSYAFTLFHRMSTRSSVSWNTLISRCVQNGAVEEA-VILLQRMQKE 545
V +L Y+ YA +F ++ V+W+ +I V+N ++EA + Q + +
Sbjct: 242 VKTGILDVYAKSKCIIYARRVFDLDFKKNEVTWSAMIGGYVENEMIKEAGEVFFQMLVND 301
Query: 546 GVELDMVTLISF---LPNLNKNGNIKQGMVIHGYAIKTGCVADVTFLNALITMYCNCGST 602
V MVT ++ L + G++ G +H YA+K G + D+T N +I+ Y GS
Sbjct: 302 NVA--MVTPVAIGLILMGCARFGDLSGGRCVHCYAVKAGFILDLTVQNTIISFYAKYGSL 359
Query: 603 NDGRLCLLLFQMGDKREISLWNAIISVYVQTNKAKQAVAFFTELLGAGLEPDNVTVLSII 662
D ++G K IS +N++I+ V + +++ F E+ +G+ PD T+L ++
Sbjct: 360 CDAFR--QFSEIGLKDVIS-YNSLITGCVVNCRPEESFRLFHEMRTSGIRPDITTLLGVL 416
Query: 663 SAGVLINSLNLTHSLMAFVIRKGLDKHVAVSNALMDSYVRCGNISMARKLFGSLIYKDAF 722
+A + +L S + + G + ++ NALMD Y +CG + +A+++F ++ +D
Sbjct: 417 TACSHLAALGHGSSCHGYCVVHGYAVNTSICNALMDMYTKCGKLDVAKRVFDTMHKRDIV 476
Query: 723 SWSVMINGYGLYGDGEAALELFKQMQLSGVRPNEITYLGVLSACSHAGLVEQSKMVFKSM 782
SW+ M+ G+G++G G+ AL LF MQ +GV P+E+T L +LSACSH+GLV++ K +F SM
Sbjct: 477 SWNTMLFGFGIHGLGKEALSLFNSMQETGVNPDEVTLLAILSACSHSGLVDEGKQLFNSM 536
Query: 783 V--EHGISQKMEHYACMVDLLGRTGHLNEAFIFVKKLPCKPSVSILESLLGACRIHGNVE 840
+ + +++HY CM DLL R G+L+EA+ FV K+P +P + +L +LL AC + N E
Sbjct: 537 SRGDFNVIPRIDHYNCMTDLLARAGYLDEAYDFVNKMPFEPDIRVLGTLLSACWTYKNAE 596
Query: 841 LGEIISGMLFEMDPENPGSYVMLHNIYASAGRWEDAYRVRSCMKRSRLKKVPGFSLV 897
LG +S + + E S V+L N Y++A RWEDA R+R K+ L K PG+S V
Sbjct: 597 LGNEVSKKMQSLG-ETTESLVLLSNTYSAAERWEDAARIRMIQKKRGLLKTPGYSWV 652
Score = 230 bits (586), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 167/619 (26%), Positives = 296/619 (47%), Gaps = 28/619 (4%)
Query: 150 FPFLIKACSSLSDLRIGREIHCVIFRTGYHQNLVIQTALVDF---YAKKGEMLTARLLFD 206
F L++ C +L +G+ IH + + L T LV+ YA E+ AR +FD
Sbjct: 2 FLSLLETCIRSRNLVLGQVIHQHLLKRSL--TLSSSTVLVNLTRLYASCNEVELARHVFD 59
Query: 207 QIPLADL--VSCNTLMAGYSFNGLDQEALETFRRILTVGLKPNVSTFSSVIPVCTRLGHF 264
+IP + ++ + ++ Y+ N ++AL+ + ++L G++P T+ V+ C L
Sbjct: 60 EIPHPRINPIAWDLMIRAYASNDFAEKALDLYYKMLNSGVRPTKYTYPFVLKACAGLRAI 119
Query: 265 CFGKSLHGFTIKSGYLFDDFLVPALISMYAGDLDLSTARKLFDSLLEKNASVWNAMISAY 324
GK +H S + D ++ AL+ YA +L A K+FD + +++ WNAMIS +
Sbjct: 120 DDGKLIHSHVNCSDFATDMYVCTALVDFYAKCGELEMAIKVFDEMPKRDMVAWNAMISGF 179
Query: 325 TQSKKFFEAFEIFRQMIRAE-MQPDLVTFVSIIPSCENYCSFQCGESLTACVIKNGLGNQ 383
+ + +F M R + + P+L T V + P+ + + G+++ + G N
Sbjct: 180 SLHCCLTDVIGLFLDMRRIDGLSPNLSTIVGMFPALGRAGALREGKAVHGYCTRMGFSND 239
Query: 384 PSVLTALLSMYAKLGNIDSAKFLFDQIPNRNLLCWNAMMSAYVRNRFWDASLAVFRQM-- 441
V T +L +YAK I A+ +FD +N + W+AM+ YV N + VF QM
Sbjct: 240 LVVKTGILDVYAKSKCIIYARRVFDLDFKKNEVTWSAMIGGYVENEMIKEAGEVFFQMLV 299
Query: 442 --QFAGLNPDAVSIISVLSGCSKLDDVLLGKSAHAFSLRKGIVSNLDVLNALLMFYSDGG 499
A + P A+ +I L GC++ D+ G+ H ++++ G + +L V N ++ FY+ G
Sbjct: 300 NDNVAMVTPVAIGLI--LMGCARFGDLSGGRCVHCYAVKAGFILDLTVQNTIISFYAKYG 357
Query: 500 QFSYAFTLFHRMSTRSSVSWNTLISRCVQNGAVEEAVILLQRMQKEGVELDMVTLISFLP 559
AF F + + +S+N+LI+ CV N EE+ L M+ G+ D+ TL+ L
Sbjct: 358 SLCDAFRQFSEIGLKDVISYNSLITGCVVNCRPEESFRLFHEMRTSGIRPDITTLLGVLT 417
Query: 560 NLNKNGNIKQGMVIHGYAIKTGCVADVTFLNALITMYCNCGSTNDGRLCLLLFQMGDKRE 619
+ + G HGY + G + + NAL+ MY CG + + +F KR+
Sbjct: 418 ACSHLAALGHGSSCHGYCVVHGYAVNTSICNALMDMYTKCGKLDVAK---RVFDTMHKRD 474
Query: 620 ISLWNAIISVYVQTNKAKQAVAFFTELLGAGLEPDNVTVLSIISA----GVLINSLNLTH 675
I WN ++ + K+A++ F + G+ PD VT+L+I+SA G++ L +
Sbjct: 475 IVSWNTMLFGFGIHGLGKEALSLFNSMQETGVNPDEVTLLAILSACSHSGLVDEGKQLFN 534
Query: 676 SLMA--FVIRKGLDKHVAVSNALMDSYVRCGNISMARKLFGSLIYK-DAFSWSVMINGYG 732
S+ F + +D + N + D R G + A + ++ D +++
Sbjct: 535 SMSRGDFNVIPRIDHY----NCMTDLLARAGYLDEAYDFVNKMPFEPDIRVLGTLLSACW 590
Query: 733 LYGDGEAALELFKQMQLSG 751
Y + E E+ K+MQ G
Sbjct: 591 TYKNAELGNEVSKKMQSLG 609
Score = 229 bits (583), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 142/461 (30%), Positives = 245/461 (53%), Gaps = 9/461 (1%)
Query: 116 NLMIRGLSNCGLHADLLHVYIKCRLSGCPSDDFTFPFLIKACSSLSDLRIGREIHCVIFR 175
+LMIR ++ L +Y K SG +T+PF++KAC+ L + G+ IH +
Sbjct: 72 DLMIRAYASNDFAEKALDLYYKMLNSGVRPTKYTYPFVLKACAGLRAIDDGKLIHSHVNC 131
Query: 176 TGYHQNLVIQTALVDFYAKKGEMLTARLLFDQIPLADLVSCNTLMAGYSFNGLDQEALET 235
+ + ++ + TALVDFYAK GE+ A +FD++P D+V+ N +++G+S + + +
Sbjct: 132 SDFATDMYVCTALVDFYAKCGELEMAIKVFDEMPKRDMVAWNAMISGFSLHCCLTDVIGL 191
Query: 236 F---RRILTVGLKPNVSTFSSVIPVCTRLGHFCFGKSLHGFTIKSGYLFDDFLVPALISM 292
F RRI GL PN+ST + P R G GK++HG+ + G+ D + ++ +
Sbjct: 192 FLDMRRI--DGLSPNLSTIVGMFPALGRAGALREGKAVHGYCTRMGFSNDLVVKTGILDV 249
Query: 293 YAGDLDLSTARKLFDSLLEKNASVWNAMISAYTQSKKFFEAFEIFRQMIRAEMQPDLVTF 352
YA + AR++FD +KN W+AMI Y +++ EA E+F QM+ + +VT
Sbjct: 250 YAKSKCIIYARRVFDLDFKKNEVTWSAMIGGYVENEMIKEAGEVFFQMLVND-NVAMVTP 308
Query: 353 VS---IIPSCENYCSFQCGESLTACVIKNGLGNQPSVLTALLSMYAKLGNIDSAKFLFDQ 409
V+ I+ C + G + +K G +V ++S YAK G++ A F +
Sbjct: 309 VAIGLILMGCARFGDLSGGRCVHCYAVKAGFILDLTVQNTIISFYAKYGSLCDAFRQFSE 368
Query: 410 IPNRNLLCWNAMMSAYVRNRFWDASLAVFRQMQFAGLNPDAVSIISVLSGCSKLDDVLLG 469
I ++++ +N++++ V N + S +F +M+ +G+ PD +++ VL+ CS L + G
Sbjct: 369 IGLKDVISYNSLITGCVVNCRPEESFRLFHEMRTSGIRPDITTLLGVLTACSHLAALGHG 428
Query: 470 KSAHAFSLRKGIVSNLDVLNALLMFYSDGGQFSYAFTLFHRMSTRSSVSWNTLISRCVQN 529
S H + + G N + NAL+ Y+ G+ A +F M R VSWNT++ +
Sbjct: 429 SSCHGYCVVHGYAVNTSICNALMDMYTKCGKLDVAKRVFDTMHKRDIVSWNTMLFGFGIH 488
Query: 530 GAVEEAVILLQRMQKEGVELDMVTLISFLPNLNKNGNIKQG 570
G +EA+ L MQ+ GV D VTL++ L + +G + +G
Sbjct: 489 GLGKEALSLFNSMQETGVNPDEVTLLAILSACSHSGLVDEG 529
Score = 131 bits (329), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 76/307 (24%), Positives = 148/307 (48%), Gaps = 3/307 (0%)
Query: 152 FLIKACSSLSDLRIGREIHCVIFRTGYHQNLVIQTALVDFYAKKGEMLTARLLFDQIPLA 211
++ C+ DL GR +HC + G+ +L +Q ++ FYAK G + A F +I L
Sbjct: 313 LILMGCARFGDLSGGRCVHCYAVKAGFILDLTVQNTIISFYAKYGSLCDAFRQFSEIGLK 372
Query: 212 DLVSCNTLMAGYSFNGLDQEALETFRRILTVGLKPNVSTFSSVIPVCTRLGHFCFGKSLH 271
D++S N+L+ G N +E+ F + T G++P+++T V+ C+ L G S H
Sbjct: 373 DVISYNSLITGCVVNCRPEESFRLFHEMRTSGIRPDITTLLGVLTACSHLAALGHGSSCH 432
Query: 272 GFTIKSGYLFDDFLVPALISMYAGDLDLSTARKLFDSLLEKNASVWNAMISAYTQSKKFF 331
G+ + GY + + AL+ MY L A+++FD++ +++ WN M+ +
Sbjct: 433 GYCVVHGYAVNTSICNALMDMYTKCGKLDVAKRVFDTMHKRDIVSWNTMLFGFGIHGLGK 492
Query: 332 EAFEIFRQMIRAEMQPDLVTFVSIIPSCENYCSFQCGESLTACVIKNGLGNQPSV--LTA 389
EA +F M + PD VT ++I+ +C + G+ L + + P +
Sbjct: 493 EALSLFNSMQETGVNPDEVTLLAILSACSHSGLVDEGKQLFNSMSRGDFNVIPRIDHYNC 552
Query: 390 LLSMYAKLGNIDSAKFLFDQIP-NRNLLCWNAMMSAYVRNRFWDASLAVFRQMQFAGLNP 448
+ + A+ G +D A +++P ++ ++SA + + V ++MQ G
Sbjct: 553 MTDLLARAGYLDEAYDFVNKMPFEPDIRVLGTLLSACWTYKNAELGNEVSKKMQSLGETT 612
Query: 449 DAVSIIS 455
+++ ++S
Sbjct: 613 ESLVLLS 619
Score = 77.0 bits (188), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 107/257 (41%), Gaps = 34/257 (13%)
Query: 139 RLSGCPSDDFTFPFLIKACSSLSDLRIGREIHCVIFRTGYHQNLVIQTALVDFYAKKGEM 198
R SG D T ++ ACS L+ L G H GY N I AL+D Y K G++
Sbjct: 401 RTSGIRPDITTLLGVLTACSHLAALGHGSSCHGYCVVHGYAVNTSICNALMDMYTKCGKL 460
Query: 199 LTARLLFDQIPLADLVSCNTLMAGYSFNGLDQEALETFRRILTVGLKPNVSTFSSVIPVC 258
A+ +FD + D+VS NT++ G+ +GL +EAL F + G+ P+ T +++ C
Sbjct: 461 DVAKRVFDTMHKRDIVSWNTMLFGFGIHGLGKEALSLFNSMQETGVNPDEVTLLAILSAC 520
Query: 259 TRLGHFCFGKSLHGFTIKSGYLFDDFLVPALISMYAGDLDLSTARKLFDSLLEKNASVWN 318
+ G GK L SM GD ++ +N
Sbjct: 521 SHSGLVDEGKQLFN------------------SMSRGDFNVI-----------PRIDHYN 551
Query: 319 AMISAYTQSKKFFEAFEIFRQMIRAEMQPDLVTFVSIIPSCENYCSFQCGESLTACVIKN 378
M ++ EA++ +M +PD+ +++ +C Y + + G ++ +
Sbjct: 552 CMTDLLARAGYLDEAYDFVNKM---PFEPDIRVLGTLLSACWTYKNAELGNEVSKKM--Q 606
Query: 379 GLGNQPSVLTALLSMYA 395
LG L L + Y+
Sbjct: 607 SLGETTESLVLLSNTYS 623
>sp|O65543|PP343_ARATH Pentatricopeptide repeat-containing protein At4g31070,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E7 PE=2
SV=2
Length = 624
Score = 333 bits (853), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 184/557 (33%), Positives = 318/557 (57%), Gaps = 16/557 (2%)
Query: 352 FVSIIPSCENYCSFQ-----CGESLTACVIKNGLGNQPSVLTALLSMYAKLGNIDSAKFL 406
F +I+PS C+FQ G L +K G V +L+SMYAK + + +
Sbjct: 56 FTAILPSVIKACAFQQEPFLLGAQLHCLCLKAGADCDTVVSNSLISMYAKFSRKYAVRKV 115
Query: 407 FDQIPNRNLLCWNAMMSAYVRNRFWDASLAVFRQMQFAGLNPDAVSIISVLSGCSKL-DD 465
FD++ +R+ + + +++++ ++ ++ + ++M F G P + + S+L+ C+++
Sbjct: 116 FDEMLHRDTVSYCSIINSCCQDGLLYEAMKLIKEMYFYGFIPKSELVASLLALCTRMGSS 175
Query: 466 VLLGKSAHAFSL-RKGIVSNLDVLNALLMFYSDGGQFSYAFTLFHRMSTRSSVSWNTLIS 524
+ + HA L + + ++ + AL+ Y + AF +F +M ++ VSW +IS
Sbjct: 176 SKVARMFHALVLVDERMQESVLLSTALVDMYLKFDDHAAAFHVFDQMEVKNEVSWTAMIS 235
Query: 525 RCVQNGAVEEAVILLQRMQKEGVELDMVTLISFLP---NLNKNGNIKQGMVIHGYAIKTG 581
CV N E V L + MQ+E + + VTL+S LP LN ++ + IHG++ + G
Sbjct: 236 GCVANQNYEMGVDLFRAMQRENLRPNRVTLLSVLPACVELNYGSSLVKE--IHGFSFRHG 293
Query: 582 CVADVTFLNALITMYCNCGSTNDGRLCLLLFQMGDKREISLWNAIISVYVQTNKAKQAVA 641
C AD A +TMYC CG+ + R+ LF+ R++ +W+++IS Y +T + +
Sbjct: 294 CHADERLTAAFMTMYCRCGNVSLSRV---LFETSKVRDVVMWSSMISGYAETGDCSEVMN 350
Query: 642 FFTELLGAGLEPDNVTVLSIISAGVLINSLNLTHSLMAFVIRKGLDKHVAVSNALMDSYV 701
++ G+E ++VT+L+I+SA L+ ++ + +++ G H+ + NAL+D Y
Sbjct: 351 LLNQMRKEGIEANSVTLLAIVSACTNSTLLSFASTVHSQILKCGFMSHILLGNALIDMYA 410
Query: 702 RCGNISMARKLFGSLIYKDAFSWSVMINGYGLYGDGEAALELFKQMQLSGVRPNEITYLG 761
+CG++S AR++F L KD SWS MIN YGL+G G ALE+FK M G +++ +L
Sbjct: 411 KCGSLSAAREVFYELTEKDLVSWSSMINAYGLHGHGSEALEIFKGMIKGGHEVDDMAFLA 470
Query: 762 VLSACSHAGLVEQSKMVFKSMVEHGISQKMEHYACMVDLLGRTGHLNEAFIFVKKLPCKP 821
+LSAC+HAGLVE+++ +F ++ + +EHYAC ++LLGR G +++AF +P KP
Sbjct: 471 ILSACNHAGLVEEAQTIFTQAGKYHMPVTLEHYACYINLLGRFGKIDDAFEVTINMPMKP 530
Query: 822 SVSILESLLGACRIHGNVEL-GEIISGMLFEMDPENPGSYVMLHNIYASAGRWEDAYRVR 880
S I SLL AC HG +++ G+II+ L + +P+NP +YV+L I+ +G + A VR
Sbjct: 531 SARIWSSLLSACETHGRLDVAGKIIANELMKSEPDNPANYVLLSKIHTESGNYHAAEEVR 590
Query: 881 SCMKRSRLKKVPGFSLV 897
M+R +L K GFS +
Sbjct: 591 RVMQRRKLNKCYGFSKI 607
Score = 182 bits (463), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 133/547 (24%), Positives = 268/547 (48%), Gaps = 18/547 (3%)
Query: 119 IRGLSNCGLHADLLHVYIKCRLSGCPSDDFT--FPFLIKACSSLSD-LRIGREIHCVIFR 175
++GL + + + L +Y K ++ ++ FT P +IKAC+ + +G ++HC+ +
Sbjct: 28 LKGLVSDQFYDEALRLY-KLKIHSLGTNGFTAILPSVIKACAFQQEPFLLGAQLHCLCLK 86
Query: 176 TGYHQNLVIQTALVDFYAKKGEMLTARLLFDQIPLADLVSCNTLMAGYSFNGLDQEALET 235
G + V+ +L+ YAK R +FD++ D VS +++ +GL EA++
Sbjct: 87 AGADCDTVVSNSLISMYAKFSRKYAVRKVFDEMLHRDTVSYCSIINSCCQDGLLYEAMKL 146
Query: 236 FRRILTVGLKPNVSTFSSVIPVCTRLGHFC-FGKSLHGFTIKSGYLFDDFLV-PALISMY 293
+ + G P +S++ +CTR+G + H + + + L+ AL+ MY
Sbjct: 147 IKEMYFYGFIPKSELVASLLALCTRMGSSSKVARMFHALVLVDERMQESVLLSTALVDMY 206
Query: 294 AGDLDLSTARKLFDSLLEKNASVWNAMISAYTQSKKFFEAFEIFRQMIRAEMQPDLVTFV 353
D + A +FD + KN W AMIS ++ + ++FR M R ++P+ VT +
Sbjct: 207 LKFDDHAAAFHVFDQMEVKNEVSWTAMISGCVANQNYEMGVDLFRAMQRENLRPNRVTLL 266
Query: 354 SIIPSCE--NYCSFQCGESLTACVIKNGLGNQPSVLTALLSMYAKLGNIDSAKFLFDQIP 411
S++P+C NY S E + ++G + A ++MY + GN+ ++ LF+
Sbjct: 267 SVLPACVELNYGSSLVKE-IHGFSFRHGCHADERLTAAFMTMYCRCGNVSLSRVLFETSK 325
Query: 412 NRNLLCWNAMMSAYVRNRFWDASLAVFRQMQFAGLNPDAVSIISVLSGCSKLDDVLLGKS 471
R+++ W++M+S Y + + QM+ G+ ++V++++++S C+ + +
Sbjct: 326 VRDVVMWSSMISGYAETGDCSEVMNLLNQMRKEGIEANSVTLLAIVSACTNSTLLSFAST 385
Query: 472 AHAFSLRKGIVSNLDVLNALLMFYSDGGQFSYAFTLFHRMSTRSSVSWNTLISRCVQNGA 531
H+ L+ G +S++ + NAL+ Y+ G S A +F+ ++ + VSW+++I+ +G
Sbjct: 386 VHSQILKCGFMSHILLGNALIDMYAKCGSLSAAREVFYELTEKDLVSWSSMINAYGLHGH 445
Query: 532 VEEAVILLQRMQKEGVELDMVTLISFLPNLNKNGNIKQGMVIHGYAIKTGCVADVTFLNA 591
EA+ + + M K G E+D + ++ L N G +++ I A K +
Sbjct: 446 GSEALEIFKGMIKGGHEVDDMAFLAILSACNHAGLVEEAQTIFTQAGKYHMPVTLEHYAC 505
Query: 592 LITMYCNCGSTNDGRLCLLLFQMGDKREISLWNAIIS---VYVQTNKAKQAVAFFTELLG 648
I + G +D + M K +W++++S + + + A + +A EL+
Sbjct: 506 YINLLGRFGKIDDA--FEVTINMPMKPSARIWSSLLSACETHGRLDVAGKIIA--NELMK 561
Query: 649 AGLEPDN 655
+ EPDN
Sbjct: 562 S--EPDN 566
Score = 78.2 bits (191), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/312 (21%), Positives = 135/312 (43%), Gaps = 34/312 (10%)
Query: 104 FPIIKKPCVFLQNLMIRGLSNCGLHADLLHVYIKCRLSGCPSDDFTFPFLIKACSSLSDL 163
F K V + + MI G + G ++++++ + R G ++ T ++ AC++ + L
Sbjct: 321 FETSKVRDVVMWSSMISGYAETGDCSEVMNLLNQMRKEGIEANSVTLLAIVSACTNSTLL 380
Query: 164 RIGREIHCVIFRTGYHQNLVIQTALVDFYAKKGEMLTARLLFDQIPLADLVSCNTLMAGY 223
+H I + G+ ++++ AL+D YAK G + AR +F ++ DLVS ++++ Y
Sbjct: 381 SFASTVHSQILKCGFMSHILLGNALIDMYAKCGSLSAAREVFYELTEKDLVSWSSMINAY 440
Query: 224 SFNGLDQEALETFRRILTVGLKPNVSTFSSVIPVCTRLGHFCFGKSLHGFTIKSGYLFDD 283
+G EALE F+ ++ G + + F +++ C G +++ FT Y
Sbjct: 441 GLHGHGSEALEIFKGMIKGGHEVDDMAFLAILSACNHAGLVEEAQTI--FTQAGKY---- 494
Query: 284 FLVPALISMYAGDLDLSTARKLFDSLLEKNASVWNAMISAYTQSKKFFEAFEIFRQMIRA 343
+P + YA ++L + K +AFE+ I
Sbjct: 495 -HMPVTLEHYACYINL------------------------LGRFGKIDDAFEV---TINM 526
Query: 344 EMQPDLVTFVSIIPSCENYCSFQCGESLTACVIKNGLGNQPSVLTALLSMYAKLGNIDSA 403
M+P + S++ +CE + + A + + P+ L ++ + GN +A
Sbjct: 527 PMKPSARIWSSLLSACETHGRLDVAGKIIANELMKSEPDNPANYVLLSKIHTESGNYHAA 586
Query: 404 KFLFDQIPNRNL 415
+ + + R L
Sbjct: 587 EEVRRVMQRRKL 598
>sp|P0C8Q2|PP323_ARATH Pentatricopeptide repeat-containing protein At4g19191,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E1 PE=2
SV=1
Length = 654
Score = 330 bits (847), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 193/599 (32%), Positives = 312/599 (52%), Gaps = 7/599 (1%)
Query: 303 RKLFDSLLEKNASVWNAMISAYTQSKKFFEAFEIFRQMIRAEMQPDLVTFVSIIPSCENY 362
R+L+ + + WN I E+ +FR+M R +P+ TF + +C
Sbjct: 6 RRLYRISGLSSVNAWNLQIREAVNRNDPVESLLLFREMKRGGFEPNNFTFPFVAKACARL 65
Query: 363 CSFQCGESLTACVIKNGLGNQPSVLTALLSMYAKLGNIDSAKFLFDQIPNRNLLCWNAMM 422
C E + A +IK+ + V TA + M+ K ++D A +F+++P R+ WNAM+
Sbjct: 66 ADVGCCEMVHAHLIKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAML 125
Query: 423 SAYVRNRFWDASLAVFRQMQFAGLNPDAVSIISVLSGCSKLDDVLLGKSAHAFSLRKGIV 482
S + ++ D + ++FR+M+ + PD+V++++++ S + L ++ HA +R G+
Sbjct: 126 SGFCQSGHTDKAFSLFREMRLNEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGVD 185
Query: 483 SNLDVLNALLMFYSDGGQFSYAFTLFHRMS--TRSSVSWNTLISRCVQNGAVEEAVILLQ 540
+ V N + Y G A +F + R+ VSWN++ G +A L
Sbjct: 186 VQVTVANTWISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYC 245
Query: 541 RMQKEGVELDMVTLISFLPNLNKNGNIKQGMVIHGYAIKTGCVADVTFLNALITMYCNCG 600
M +E + D+ T I+ + + QG +IH +AI G D+ +N I+MY
Sbjct: 246 LMLREEFKPDLSTFINLAASCQNPETLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSE 305
Query: 601 STNDGRLCLLLFQMGDKREISLWNAIISVYVQTNKAKQAVAFFTELLGAGLEPDNVTVLS 660
T RL LF + R W +IS Y + +A+A F ++ +G +PD VT+LS
Sbjct: 306 DTCSARL---LFDIMTSRTCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLS 362
Query: 661 IISAGVLINSLNLTHSLMAFVIRKGLDK-HVAVSNALMDSYVRCGNISMARKLFGSLIYK 719
+IS SL + A G + +V + NAL+D Y +CG+I AR +F + K
Sbjct: 363 LISGCGKFGSLETGKWIDARADIYGCKRDNVMICNALIDMYSKCGSIHEARDIFDNTPEK 422
Query: 720 DAFSWSVMINGYGLYGDGEAALELFKQMQLSGVRPNEITYLGVLSACSHAGLVEQSKMVF 779
+W+ MI GY L G AL+LF +M +PN IT+L VL AC+H+G +E+ F
Sbjct: 423 TVVTWTTMIAGYALNGIFLEALKLFSKMIDLDYKPNHITFLAVLQACAHSGSLEKGWEYF 482
Query: 780 KSMVE-HGISQKMEHYACMVDLLGRTGHLNEAFIFVKKLPCKPSVSILESLLGACRIHGN 838
M + + IS ++HY+CMVDLLGR G L EA ++ + KP I +LL AC+IH N
Sbjct: 483 HIMKQVYNISPGLDHYSCMVDLLGRKGKLEEALELIRNMSAKPDAGIWGALLNACKIHRN 542
Query: 839 VELGEIISGMLFEMDPENPGSYVMLHNIYASAGRWEDAYRVRSCMKRSRLKKVPGFSLV 897
V++ E + LF ++P+ YV + NIYA+AG W+ R+RS MK+ +KK PG S++
Sbjct: 543 VKIAEQAAESLFNLEPQMAAPYVEMANIYAAAGMWDGFARIRSIMKQRNIKKYPGESVI 601
Score = 220 bits (561), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 150/510 (29%), Positives = 256/510 (50%), Gaps = 18/510 (3%)
Query: 231 EALETFRRILTVGLKPNVSTFSSVIPVCTRLGHFCFGKSLHGFTIKSGYLFDDFLVPALI 290
E+L FR + G +PN TF V C RL + +H IKS + D F+ A +
Sbjct: 35 ESLLLFREMKRGGFEPNNFTFPFVAKACARLADVGCCEMVHAHLIKSPFWSDVFVGTATV 94
Query: 291 SMYAGDLDLSTARKLFDSLLEKNASVWNAMISAYTQSKKFFEAFEIFRQMIRAEMQPDLV 350
M+ + A K+F+ + E++A+ WNAM+S + QS +AF +FR+M E+ PD V
Sbjct: 95 DMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSGHTDKAFSLFREMRLNEITPDSV 154
Query: 351 TFVSIIPSCENYCSFQCGESLTACVIKNGLGNQPSVLTALLSMYAKLGNIDSAKFLFDQI 410
T +++I S S + E++ A I+ G+ Q +V +S Y K G++DSAK +F+ I
Sbjct: 155 TVMTLIQSASFEKSLKLLEAMHAVGIRLGVDVQVTVANTWISTYGKCGDLDSAKLVFEAI 214
Query: 411 P--NRNLLCWNAMMSAY-VRNRFWDASLAVFRQMQFAGLNPDAVSIISVLSGCSKLDDVL 467
+R ++ WN+M AY V +DA ++ M PD + I++ + C + +
Sbjct: 215 DRGDRTVVSWNSMFKAYSVFGEAFDA-FGLYCLMLREEFKPDLSTFINLAASCQNPETLT 273
Query: 468 LGKSAHAFSLRKGIVSNLDVLNALLMFYSDGGQFSYAFTLFHRMSTRSSVSWNTLISRCV 527
G+ H+ ++ G +++ +N + YS A LF M++R+ VSW +IS
Sbjct: 274 QGRLIHSHAIHLGTDQDIEAINTFISMYSKSEDTCSARLLFDIMTSRTCVSWTVMISGYA 333
Query: 528 QNGAVEEAVILLQRMQKEGVELDMVTLISFLPNLNKNGNIKQGMVIHGYAIKTGCVAD-V 586
+ G ++EA+ L M K G + D+VTL+S + K G+++ G I A GC D V
Sbjct: 334 EKGDMDEALALFHAMIKSGEKPDLVTLLSLISGCGKFGSLETGKWIDARADIYGCKRDNV 393
Query: 587 TFLNALITMYCNCGSTNDGRLCLLLFQMGDKREISLWNAIISVYVQTNKAKQAVAFFTEL 646
NALI MY CGS ++ R +F ++ + W +I+ Y +A+ F+++
Sbjct: 394 MICNALIDMYSKCGSIHEAR---DIFDNTPEKTVVTWTTMIAGYALNGIFLEALKLFSKM 450
Query: 647 LGAGLEPDNVTVLSIISA----GVLINSLNLTHSL-MAFVIRKGLDKHVAVSNALMDSYV 701
+ +P+++T L+++ A G L H + + I GLD + + ++D
Sbjct: 451 IDLDYKPNHITFLAVLQACAHSGSLEKGWEYFHIMKQVYNISPGLDHY----SCMVDLLG 506
Query: 702 RCGNISMARKLFGSLIYK-DAFSWSVMING 730
R G + A +L ++ K DA W ++N
Sbjct: 507 RKGKLEEALELIRNMSAKPDAGIWGALLNA 536
Score = 198 bits (504), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 124/458 (27%), Positives = 230/458 (50%), Gaps = 3/458 (0%)
Query: 116 NLMIRGLSNCGLHADLLHVYIKCRLSGCPSDDFTFPFLIKACSSLSDLRIGREIHCVIFR 175
NL IR N + L ++ + + G ++FTFPF+ KAC+ L+D+ +H + +
Sbjct: 21 NLQIREAVNRNDPVESLLLFREMKRGGFEPNNFTFPFVAKACARLADVGCCEMVHAHLIK 80
Query: 176 TGYHQNLVIQTALVDFYAKKGEMLTARLLFDQIPLADLVSCNTLMAGYSFNGLDQEALET 235
+ + ++ + TA VD + K + A +F+++P D + N +++G+ +G +A
Sbjct: 81 SPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSGHTDKAFSL 140
Query: 236 FRRILTVGLKPNVSTFSSVIPVCTRLGHFCFGKSLHGFTIKSGYLFDDFLVPALISMYAG 295
FR + + P+ T ++I + +++H I+ G + IS Y
Sbjct: 141 FREMRLNEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGVDVQVTVANTWISTYGK 200
Query: 296 DLDLSTARKLFDSLLEKNASV--WNAMISAYTQSKKFFEAFEIFRQMIRAEMQPDLVTFV 353
DL +A+ +F+++ + +V WN+M AY+ + F+AF ++ M+R E +PDL TF+
Sbjct: 201 CGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLREEFKPDLSTFI 260
Query: 354 SIIPSCENYCSFQCGESLTACVIKNGLGNQPSVLTALLSMYAKLGNIDSAKFLFDQIPNR 413
++ SC+N + G + + I G + +SMY+K + SA+ LFD + +R
Sbjct: 261 NLAASCQNPETLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSEDTCSARLLFDIMTSR 320
Query: 414 NLLCWNAMMSAYVRNRFWDASLAVFRQMQFAGLNPDAVSIISVLSGCSKLDDVLLGKSAH 473
+ W M+S Y D +LA+F M +G PD V+++S++SGC K + GK
Sbjct: 321 TCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLISGCGKFGSLETGKWID 380
Query: 474 AFSLRKGIV-SNLDVLNALLMFYSDGGQFSYAFTLFHRMSTRSSVSWNTLISRCVQNGAV 532
A + G N+ + NAL+ YS G A +F ++ V+W T+I+ NG
Sbjct: 381 ARADIYGCKRDNVMICNALIDMYSKCGSIHEARDIFDNTPEKTVVTWTTMIAGYALNGIF 440
Query: 533 EEAVILLQRMQKEGVELDMVTLISFLPNLNKNGNIKQG 570
EA+ L +M + + +T ++ L +G++++G
Sbjct: 441 LEALKLFSKMIDLDYKPNHITFLAVLQACAHSGSLEKG 478
Score = 164 bits (416), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 114/427 (26%), Positives = 190/427 (44%), Gaps = 27/427 (6%)
Query: 116 NLMIRGLSNCGLHADLLHVYIKCRLSGCPSDDFTFPFLIKACSSLSDLRIGREIHCVIFR 175
N M+ G G ++ + RL+ D T LI++ S L++ +H V R
Sbjct: 122 NAMLSGFCQSGHTDKAFSLFREMRLNEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIR 181
Query: 176 TGYHQNLVIQTALVDFYAKKGEMLTARLLFDQIPLAD--LVSCNTLMAGYSFNGLDQEAL 233
G + + + Y K G++ +A+L+F+ I D +VS N++ YS G +A
Sbjct: 182 LGVDVQVTVANTWISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAF 241
Query: 234 ETFRRILTVGLKPNVSTFSSVIPVCTRLGHFCFGKSLHGFTIKSGYLFDDFLVPALISMY 293
+ +L KP++STF ++ C G+ +H I G D + ISMY
Sbjct: 242 GLYCLMLREEFKPDLSTFINLAASCQNPETLTQGRLIHSHAIHLGTDQDIEAINTFISMY 301
Query: 294 AGDLDLSTARKLFDSLLEKNASVWNAMISAYTQSKKFFEAFEIFRQMIRAEMQPDLVTFV 353
+ D +AR LFD + + W MIS Y + EA +F MI++ +PDLVT +
Sbjct: 302 SKSEDTCSARLLFDIMTSRTCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLL 361
Query: 354 SIIPSCENYCSFQCGESLTACVIKNGLG-NQPSVLTALLSMYAKLGNIDSAKFLFDQIPN 412
S+I C + S + G+ + A G + + AL+ MY+K G+I A+ +FD P
Sbjct: 362 SLISGCGKFGSLETGKWIDARADIYGCKRDNVMICNALIDMYSKCGSIHEARDIFDNTPE 421
Query: 413 RNLLCWNAMMSAYVRNRFWDASLAVFRQMQFAGLNPDAVSIISVLSGCSKLDDVLLGKSA 472
+ ++ W M++ Y N + +L +F +M P+ ++ ++VL C A
Sbjct: 422 KTVVTWTTMIAGYALNGIFLEALKLFSKMIDLDYKPNHITFLAVLQAC-----------A 470
Query: 473 HAFSLRKG------------IVSNLDVLNALLMFYSDGGQFSYAFTLFHRMSTRSSVS-W 519
H+ SL KG I LD + ++ G+ A L MS + W
Sbjct: 471 HSGSLEKGWEYFHIMKQVYNISPGLDHYSCMVDLLGRKGKLEEALELIRNMSAKPDAGIW 530
Query: 520 NTLISRC 526
L++ C
Sbjct: 531 GALLNAC 537
>sp|Q9LFL5|PP390_ARATH Pentatricopeptide repeat-containing protein At5g16860
OS=Arabidopsis thaliana GN=PCMP-H92 PE=2 SV=1
Length = 850
Score = 330 bits (846), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 207/662 (31%), Positives = 335/662 (50%), Gaps = 50/662 (7%)
Query: 285 LVPALISMYAGDLDLSTARKLFDSLLEKNASV--WNAMISAYTQSKKFFEAFEIFRQMIR 342
L LIS Y LS A L +A V WN++I +Y + + +F M
Sbjct: 61 LTSHLISTYISVGCLSHAVSLLRRFPPSDAGVYHWNSLIRSYGDNGCANKCLYLFGLMHS 120
Query: 343 AEMQPDLVTFVSIIPSCENYCSFQCGESLTACVIKNGLGNQPSVLTALLSMYAKLGNIDS 402
PD TF + +C S +CGES A + G + V AL++MY++ ++
Sbjct: 121 LSWTPDNYTFPFVFKACGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLSD 180
Query: 403 AKFLFDQIPNRNLLCWNAMMSAYVRNRFWDASLAVFRQMQFA-GLNPDAVSIISVLSGCS 461
A+ +FD++ +++ WN+++ +Y + +L +F +M G PD +++++VL C+
Sbjct: 181 ARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCA 240
Query: 462 KLDDVLLGKSAHAFSLRKGIVSNLDVLNALLMFYSDGGQFSYAFTLFHRMSTRSSVSWNT 521
L LGK H F++ ++ N+ V N L+ Y+ G A T+F MS + VSWN
Sbjct: 241 SLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNA 300
Query: 522 LISRCVQNGAVEEAVILLQRMQKEGVELDMVT---------------------------- 553
+++ Q G E+AV L ++MQ+E +++D+VT
Sbjct: 301 MVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSG 360
Query: 554 -------LISFLPNLNKNGNIKQGMVIHGYAIK-------TGCVADVTFLNALITMYCNC 599
LIS L G + G IH YAIK G + +N LI MY C
Sbjct: 361 IKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKC 420
Query: 600 GSTNDGRLCLLLFQMGDKREISLWNAIISVYVQTNKAKQAVAFFTELLGAGLE--PDNVT 657
+ R + +R++ W +I Y Q A +A+ +E+ + P+ T
Sbjct: 421 KKVDTAR-AMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFT 479
Query: 658 VLSIISAGVLINSLNLTHSLMAFVIRKGLDK-HVAVSNALMDSYVRCGNISMARKLFGSL 716
+ + A + +L + + A+ +R + + VSN L+D Y +CG+IS AR +F ++
Sbjct: 480 ISCALVACASLAALRIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDARLVFDNM 539
Query: 717 IYKDAFSWSVMINGYGLYGDGEAALELFKQMQLSGVRPNEITYLGVLSACSHAGLVEQSK 776
+ K+ +W+ ++ GYG++G GE AL +F +M+ G + + +T L VL ACSH+G+++Q
Sbjct: 540 MAKNEVTWTSLMTGYGMHGYGEEALGIFDEMRRIGFKLDGVTLLVVLYACSHSGMIDQGM 599
Query: 777 MVFKSM-VEHGISQKMEHYACMVDLLGRTGHLNEAFIFVKKLPCKPSVSILESLLGACRI 835
F M G+S EHYAC+VDLLGR G LN A ++++P +P + + L CRI
Sbjct: 600 EYFNRMKTVFGVSPGPEHYACLVDLLGRAGRLNAALRLIEEMPMEPPPVVWVAFLSCCRI 659
Query: 836 HGNVELGEIISGMLFEMDPENPGSYVMLHNIYASAGRWEDAYRVRSCMKRSRLKKVPGFS 895
HG VELGE + + E+ + GSY +L N+YA+AGRW+D R+RS M+ +KK PG S
Sbjct: 660 HGKVELGEYAAEKITELASNHDGSYTLLSNLYANAGRWKDVTRIRSLMRHKGVKKRPGCS 719
Query: 896 LV 897
V
Sbjct: 720 WV 721
Score = 220 bits (561), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 146/509 (28%), Positives = 254/509 (49%), Gaps = 50/509 (9%)
Query: 112 VFLQNLMIRGLSNCGLHADLLHVY-IKCRLSGCPSDDFTFPFLIKACSSLSDLRIGREIH 170
V+ N +IR + G L+++ + LS P D++TFPF+ KAC +S +R G H
Sbjct: 92 VYHWNSLIRSYGDNGCANKCLYLFGLMHSLSWTP-DNYTFPFVFKACGEISSVRCGESAH 150
Query: 171 CVIFRTGYHQNLVIQTALVDFYAKKGEMLTARLLFDQIPLADLVSCNTLMAGYSFNGLDQ 230
+ TG+ N+ + ALV Y++ + AR +FD++ + D+VS N+++ Y+ G +
Sbjct: 151 ALSLVTGFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPK 210
Query: 231 EALETFRRILT-VGLKPNVSTFSSVIPVCTRLGHFCFGKSLHGFTIKSGYLFDDFLVPAL 289
ALE F R+ G +P+ T +V+P C LG GK LH F + S + + F+ L
Sbjct: 211 VALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCL 270
Query: 290 ISMYAGDLDLSTARKLFDSLLEKNASVWNAMISAYTQSKKF------------------- 330
+ MYA + A +F ++ K+ WNAM++ Y+Q +F
Sbjct: 271 VDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDV 330
Query: 331 ----------------FEAFEIFRQMIRAEMQPDLVTFVSIIPSCENYCSFQCGESLTAC 374
+EA + RQM+ + ++P+ VT +S++ C + + G+ +
Sbjct: 331 VTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCY 390
Query: 375 VI-------KNGLGNQPSVLTALLSMYAKLGNIDSAKFLFDQI--PNRNLLCWNAMMSAY 425
I KNG G++ V+ L+ MYAK +D+A+ +FD + R+++ W M+ Y
Sbjct: 391 AIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGY 450
Query: 426 VRNRFWDASLAVFRQM--QFAGLNPDAVSIISVLSGCSKLDDVLLGKSAHAFSLR-KGIV 482
++ + +L + +M + P+A +I L C+ L + +GK HA++LR +
Sbjct: 451 SQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQNA 510
Query: 483 SNLDVLNALLMFYSDGGQFSYAFTLFHRMSTRSSVSWNTLISRCVQNGAVEEAVILLQRM 542
L V N L+ Y+ G S A +F M ++ V+W +L++ +G EEA+ + M
Sbjct: 511 VPLFVSNCLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMTGYGMHGYGEEALGIFDEM 570
Query: 543 QKEGVELDMVTLISFLPNLNKNGNIKQGM 571
++ G +LD VTL+ L + +G I QGM
Sbjct: 571 RRIGFKLDGVTLLVVLYACSHSGMIDQGM 599
Score = 203 bits (516), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 188/754 (24%), Positives = 336/754 (44%), Gaps = 97/754 (12%)
Query: 133 HVYIKCRLSGCPSDDFTFPFLIKACSSLSDLRIGREIHCVIFRTGYHQNLVIQTALVDFY 192
H YIK L + + T PF+ K C ++S +++ IH + G L + + L+ Y
Sbjct: 15 HQYIKVSLFSTSAPEITPPFIHK-CKTISQVKL---IHQKLLSFGI-LTLNLTSHLISTY 69
Query: 193 AKKGEMLTARLLFDQIPLAD--LVSCNTLMAGYSFNGLDQEALETFRRILTVGLKPNVST 250
G + A L + P +D + N+L+ Y NG + L F + ++ P+ T
Sbjct: 70 ISVGCLSHAVSLLRRFPPSDAGVYHWNSLIRSYGDNGCANKCLYLFGLMHSLSWTPDNYT 129
Query: 251 FSSVIPVCTRLGHFCFGKSLHGFTIKSGYLFDDFLVPALISMYAGDLDLSTARKLFDSLL 310
F V C + G+S H ++ +G++ + F+ AL++MY+ LS ARK+FD +
Sbjct: 130 FPFVFKACGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLSDARKVFDEMS 189
Query: 311 EKNASVWNAMISAYTQSKKFFEAFEIFRQMIRA-EMQPDLVTFVSIIPSCENYCSFQCGE 369
+ WN++I +Y + K A E+F +M +PD +T V+++P C + + G+
Sbjct: 190 VWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGK 249
Query: 370 SLTACVIKNGLGNQPSVLTALLSMYAKLGNIDSAKFLFDQIPNRNLLCWNAMMSAYVR-N 428
L + + + V L+ MYAK G +D A +F + ++++ WNAM++ Y +
Sbjct: 250 QLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIG 309
Query: 429 RFWDA----------------------------------SLAVFRQMQFAGLNPDAVSII 454
RF DA +L V RQM +G+ P+ V++I
Sbjct: 310 RFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLI 369
Query: 455 SVLSGCSKLDDVLLGKSAHAFSLRKGIVSNLD-------VLNALLMFYSDGGQFSYAFTL 507
SVLSGC+ + ++ GK H ++++ I + V+N L+ Y+ + A +
Sbjct: 370 SVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAM 429
Query: 508 FHRMST--RSSVSWNTLISRCVQNGAVEEAVILLQRMQKEGVEL--DMVTLISFLPNLNK 563
F +S R V+W +I Q+G +A+ LL M +E + + T+ L
Sbjct: 430 FDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACAS 489
Query: 564 NGNIKQGMVIHGYAIKTGCVADVTFL-NALITMYCNCGSTNDGRLCLLLFQMGDKREISL 622
++ G IH YA++ A F+ N LI MY CGS +D R L+ M K E++
Sbjct: 490 LAALRIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDAR--LVFDNMMAKNEVT- 546
Query: 623 WNAIISVYVQTNKAKQAVAFFTELLGAGLEPDNVTVLSIISAGVLINSLNLTHSLMAFVI 682
W ++++ Y ++A+ F E+ G + D VT+L ++ A +HS M I
Sbjct: 547 WTSLMTGYGMHGYGEEALGIFDEMRRIGFKLDGVTLLVVLYA--------CSHSGM---I 595
Query: 683 RKGLDKHVAVSNALMDSYVRCGNISMARKLFGSLIYKDAFSWSVMINGYGLYGDGEAALE 742
+G++ + + +FG + ++ +++ G G AAL
Sbjct: 596 DQGMEY-----------------FNRMKTVFG--VSPGPEHYACLVDLLGRAGRLNAALR 636
Query: 743 LFKQMQLSGVRPNEITYLGVLSACSHAGLVEQSKMVFKSMVEHGISQKMEHYACMVDLLG 802
L ++M + P + ++ LS C G VE + + + E S Y + +L
Sbjct: 637 LIEEMPM---EPPPVVWVAFLSCCRIHGKVELGEYAAEKITELA-SNHDGSYTLLSNLYA 692
Query: 803 RTGHLNE-----AFIFVKKLPCKPSVSILESLLG 831
G + + + K + +P S +E + G
Sbjct: 693 NAGRWKDVTRIRSLMRHKGVKKRPGCSWVEGIKG 726
Score = 175 bits (443), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 129/496 (26%), Positives = 222/496 (44%), Gaps = 70/496 (14%)
Query: 89 LEAFEITSYHIALSSFPIIKKPCVFLQNLMIRGLSNCGLHADLLHVYIKCRLSGCPSDDF 148
+ +++ S++ + S+ + KP V L+ M ++N GC D+
Sbjct: 188 MSVWDVVSWNSIIESYAKLGKPKVALE--MFSRMTN---------------EFGCRPDNI 230
Query: 149 TFPFLIKACSSLSDLRIGREIHCVIFRTGYHQNLVIQTALVDFYAKKGEMLTARLLFDQI 208
T ++ C+SL +G+++HC + QN+ + LVD YAK G M A +F +
Sbjct: 231 TLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNM 290
Query: 209 PLADLVSCNTLMAGYS-----------------------------------FNGLDQEAL 233
+ D+VS N ++AGYS GL EAL
Sbjct: 291 SVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEAL 350
Query: 234 ETFRRILTVGLKPNVSTFSSVIPVCTRLGHFCFGKSLHGFTI-------KSGYLFDDFLV 286
R++L+ G+KPN T SV+ C +G GK +H + I K+G+ ++ ++
Sbjct: 351 GVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVI 410
Query: 287 PALISMYAGDLDLSTARKLFDSL--LEKNASVWNAMISAYTQSKKFFEAFEIFRQMIRAE 344
LI MYA + TAR +FDSL E++ W MI Y+Q +A E+ +M +
Sbjct: 411 NQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEED 470
Query: 345 MQ--PDLVTFVSIIPSCENYCSFQCGESLTACVIKNGLGNQP-SVLTALLSMYAKLGNID 401
Q P+ T + +C + + + G+ + A ++N P V L+ MYAK G+I
Sbjct: 471 CQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSIS 530
Query: 402 SAKFLFDQIPNRNLLCWNAMMSAYVRNRFWDASLAVFRQMQFAGLNPDAVSIISVLSGCS 461
A+ +FD + +N + W ++M+ Y + + + +L +F +M+ G D V+++ VL CS
Sbjct: 531 DARLVFDNMMAKNEVTWTSLMTGYGMHGYGEEALGIFDEMRRIGFKLDGVTLLVVLYACS 590
Query: 462 KLDDVLLGKSAHAFSLRK---GIVSNLDVLNALLMFYSDGGQFSYAFTLFHRMSTR-SSV 517
++ + F+ K G+ + L+ G+ + A L M V
Sbjct: 591 H--SGMIDQGMEYFNRMKTVFGVSPGPEHYACLVDLLGRAGRLNAALRLIEEMPMEPPPV 648
Query: 518 SWNTLISRCVQNGAVE 533
W +S C +G VE
Sbjct: 649 VWVAFLSCCRIHGKVE 664
>sp|Q9LRV9|PP228_ARATH Pentatricopeptide repeat-containing protein At3g13880
OS=Arabidopsis thaliana GN=PCMP-E89 PE=2 SV=1
Length = 748
Score = 329 bits (843), Expect = 8e-89, Method: Compositional matrix adjust.
Identities = 211/695 (30%), Positives = 349/695 (50%), Gaps = 25/695 (3%)
Query: 225 FNGLDQEALETF--------RRILTVGLKPNVSTFSS-----VIPVCTRLGHFCFGKSLH 271
FN + Q++L T R L+ +P + S + + G GK H
Sbjct: 11 FNNIAQDSLVTLITKRVGLGYRFLSSLCQPKNTALDSEGYKILFQTAAKSGSVVLGKLAH 70
Query: 272 GFTIKSGYLFDDFLVPALISMYAGDLDLSTARKLFDSLLEKNASVWNAMISAYTQSKKFF 331
G IKS +L+ L++MY +L AR+LFD + E+N +N++IS YTQ +
Sbjct: 71 GHMIKSSLNPCLYLLNNLLNMYCKCRELGFARQLFDRMPERNIISFNSLISGYTQMGFYE 130
Query: 332 EAFEIFRQMIRAEMQPDLVTFVSIIPSCENYCSFQCGESLTACVIKNGLGNQPSVLTALL 391
+A E+F + A ++ D T+ + C C GE L V+ NGL Q ++ L+
Sbjct: 131 QAMELFLEAREANLKLDKFTYAGALGFCGERCDLDLGELLHGLVVVNGLSQQVFLINVLI 190
Query: 392 SMYAKLGNIDSAKFLFDQIPNRNLLCWNAMMSAYVRNRFWDASLAVFRQMQFAGLNPDAV 451
MY+K G +D A LFD+ R+ + WN+++S YVR + L + +M GLN
Sbjct: 191 DMYSKCGKLDQAMSLFDRCDERDQVSWNSLISGYVRVGAAEEPLNLLAKMHRDGLNLTTY 250
Query: 452 SIISVLSGCS-KLDDVLL--GKSAHAFSLRKGIVSNLDVLNALLMFYSDGGQFSYAFTLF 508
++ SVL C L++ + G + H ++ + G+ ++ V ALL Y+ G A LF
Sbjct: 251 ALGSVLKACCINLNEGFIEKGMAIHCYTAKLGMEFDIVVRTALLDMYAKNGSLKEAIKLF 310
Query: 509 HRMSTRSSVSWNTLISRCVQ-----NGAVEEAVILLQRMQKEGVELDMVTLISFLPNLNK 563
M +++ V++N +IS +Q + A EA L MQ+ G+E T L +
Sbjct: 311 SLMPSKNVVTYNAMISGFLQMDEITDEASSEAFKLFMDMQRRGLEPSPSTFSVVLKACSA 370
Query: 564 NGNIKQGMVIHGYAIKTGCVADVTFLNALITMYCNCGSTNDGRLCLLLFQMGDKREISLW 623
++ G IH K +D +ALI +Y GST DG C F K++I+ W
Sbjct: 371 AKTLEYGRQIHALICKNNFQSDEFIGSALIELYALMGSTEDGMQC---FASTSKQDIASW 427
Query: 624 NAIISVYVQTNKAKQAVAFFTELLGAGLEPDNVTVLSIISAGVLINSLNLTHSLMAFVIR 683
++I +VQ + + A F +L + + P+ TV ++SA +L+ + + I+
Sbjct: 428 TSMIDCHVQNEQLESAFDLFRQLFSSHIRPEEYTVSLMMSACADFAALSSGEQIQGYAIK 487
Query: 684 KGLDKHVAVSNALMDSYVRCGNISMARKLFGSLIYKDAFSWSVMINGYGLYGDGEAALEL 743
G+D +V + + Y + GN+ +A ++F + D ++S MI+ +G AL +
Sbjct: 488 SGIDAFTSVKTSSISMYAKSGNMPLANQVFIEVQNPDVATYSAMISSLAQHGSANEALNI 547
Query: 744 FKQMQLSGVRPNEITYLGVLSACSHAGLVEQSKMVFKSMV-EHGISQKMEHYACMVDLLG 802
F+ M+ G++PN+ +LGVL AC H GLV Q F+ M ++ I+ +H+ C+VDLLG
Sbjct: 548 FESMKTHGIKPNQQAFLGVLIACCHGGLVTQGLKYFQCMKNDYRINPNEKHFTCLVDLLG 607
Query: 803 RTGHLNEAFIFVKKLPCKPSVSILESLLGACRIHGNVELGEIISGMLFEMDPENPGSYVM 862
RTG L++A + + +LL +CR++ + +G+ ++ L E++PE GSYV+
Sbjct: 608 RTGRLSDAENLILSSGFQDHPVTWRALLSSCRVYKDSVIGKRVAERLMELEPEASGSYVL 667
Query: 863 LHNIYASAGRWEDAYRVRSCMKRSRLKKVPGFSLV 897
LHNIY +G A VR M+ +KK P S +
Sbjct: 668 LHNIYNDSGVNSSAEEVRELMRDRGVKKEPALSWI 702
Score = 187 bits (476), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 115/464 (24%), Positives = 221/464 (47%), Gaps = 8/464 (1%)
Query: 116 NLMIRGLSNCGLHADLLHVYIKCRLSGCPSDDFTFPFLIKACSSLSDLRIGREIHCVIFR 175
N +I G + G + + ++++ R + D FT+ + C DL +G +H ++
Sbjct: 117 NSLISGYTQMGFYEQAMELFLEAREANLKLDKFTYAGALGFCGERCDLDLGELLHGLVVV 176
Query: 176 TGYHQNLVIQTALVDFYAKKGEMLTARLLFDQIPLADLVSCNTLMAGYSFNGLDQEALET 235
G Q + + L+D Y+K G++ A LFD+ D VS N+L++GY G +E L
Sbjct: 177 NGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCDERDQVSWNSLISGYVRVGAAEEPLNL 236
Query: 236 FRRILTVGLKPNVSTFSSVIPVCT---RLGHFCFGKSLHGFTIKSGYLFDDFLVPALISM 292
++ GL SV+ C G G ++H +T K G FD + AL+ M
Sbjct: 237 LAKMHRDGLNLTTYALGSVLKACCINLNEGFIEKGMAIHCYTAKLGMEFDIVVRTALLDM 296
Query: 293 YAGDLDLSTARKLFDSLLEKNASVWNAMISAYTQSKKFF-----EAFEIFRQMIRAEMQP 347
YA + L A KLF + KN +NAMIS + Q + EAF++F M R ++P
Sbjct: 297 YAKNGSLKEAIKLFSLMPSKNVVTYNAMISGFLQMDEITDEASSEAFKLFMDMQRRGLEP 356
Query: 348 DLVTFVSIIPSCENYCSFQCGESLTACVIKNGLGNQPSVLTALLSMYAKLGNIDSAKFLF 407
TF ++ +C + + G + A + KN + + +AL+ +YA +G+ + F
Sbjct: 357 SPSTFSVVLKACSAAKTLEYGRQIHALICKNNFQSDEFIGSALIELYALMGSTEDGMQCF 416
Query: 408 DQIPNRNLLCWNAMMSAYVRNRFWDASLAVFRQMQFAGLNPDAVSIISVLSGCSKLDDVL 467
+++ W +M+ +V+N +++ +FRQ+ + + P+ ++ ++S C+ +
Sbjct: 417 ASTSKQDIASWTSMIDCHVQNEQLESAFDLFRQLFSSHIRPEEYTVSLMMSACADFAALS 476
Query: 468 LGKSAHAFSLRKGIVSNLDVLNALLMFYSDGGQFSYAFTLFHRMSTRSSVSWNTLISRCV 527
G+ ++++ GI + V + + Y+ G A +F + +++ +IS
Sbjct: 477 SGEQIQGYAIKSGIDAFTSVKTSSISMYAKSGNMPLANQVFIEVQNPDVATYSAMISSLA 536
Query: 528 QNGAVEEAVILLQRMQKEGVELDMVTLISFLPNLNKNGNIKQGM 571
Q+G+ EA+ + + M+ G++ + + L G + QG+
Sbjct: 537 QHGSANEALNIFESMKTHGIKPNQQAFLGVLIACCHGGLVTQGL 580
Score = 181 bits (458), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 151/612 (24%), Positives = 270/612 (44%), Gaps = 19/612 (3%)
Query: 138 CRLSGCPSDDFTFPFLIKACSSLSDLRIGREIHCVIFRTGYHQNLVIQTALVDFYAKKGE 197
C+ D + L + + + +G+ H + ++ + L + L++ Y K E
Sbjct: 38 CQPKNTALDSEGYKILFQTAAKSGSVVLGKLAHGHMIKSSLNPCLYLLNNLLNMYCKCRE 97
Query: 198 MLTARLLFDQIPLADLVSCNTLMAGYSFNGLDQEALETFRRILTVGLKPNVSTFSSVIPV 257
+ AR LFD++P +++S N+L++GY+ G ++A+E F LK + T++ +
Sbjct: 98 LGFARQLFDRMPERNIISFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFTYAGALGF 157
Query: 258 CTRLGHFCFGKSLHGFTIKSGYLFDDFLVPALISMYAGDLDLSTARKLFDSLLEKNASVW 317
C G+ LHG + +G FL+ LI MY+ L A LFD E++ W
Sbjct: 158 CGERCDLDLGELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCDERDQVSW 217
Query: 318 NAMISAYTQSKKFFEAFEIFRQMIRAEMQPDLVTFVSIIPSC---ENYCSFQCGESLTAC 374
N++IS Y + E + +M R + S++ +C N + G ++
Sbjct: 218 NSLISGYVRVGAAEEPLNLLAKMHRDGLNLTTYALGSVLKACCINLNEGFIEKGMAIHCY 277
Query: 375 VIKNGLGNQPSVLTALLSMYAKLGNIDSAKFLFDQIPNRNLLCWNAMMSAYVR-----NR 429
K G+ V TALL MYAK G++ A LF +P++N++ +NAM+S +++ +
Sbjct: 278 TAKLGMEFDIVVRTALLDMYAKNGSLKEAIKLFSLMPSKNVVTYNAMISGFLQMDEITDE 337
Query: 430 FWDASLAVFRQMQFAGLNPDAVSIISVLSGCSKLDDVLLGKSAHAFSLRKGIVSNLDVLN 489
+ +F MQ GL P + VL CS + G+ HA + S+ + +
Sbjct: 338 ASSEAFKLFMDMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQIHALICKNNFQSDEFIGS 397
Query: 490 ALLMFYSDGGQFSYAFTLFHRMSTRSSVSWNTLISRCVQNGAVEEAVILLQRMQKEGVEL 549
AL+ Y+ G F S + SW ++I VQN +E A L +++ +
Sbjct: 398 ALIELYALMGSTEDGMQCFASTSKQDIASWTSMIDCHVQNEQLESAFDLFRQLFSSHIRP 457
Query: 550 DMVTLISFLPNLNKNGNIKQGMVIHGYAIKTGCVADVTFLNALITMYCNCGSTNDGRLCL 609
+ T+ + + G I GYAIK+G A + + I+MY G+
Sbjct: 458 EEYTVSLMMSACADFAALSSGEQIQGYAIKSGIDAFTSVKTSSISMYAKSGNMPLANQVF 517
Query: 610 LLFQMGDKREISLWNAIISVYVQTNKAKQAVAFFTELLGAGLEPDNVTVLSIISA----G 665
+ Q D ++ ++A+IS Q A +A+ F + G++P+ L ++ A G
Sbjct: 518 IEVQNPD---VATYSAMISSLAQHGSANEALNIFESMKTHGIKPNQQAFLGVLIACCHGG 574
Query: 666 VLINSLNLTHSLMAFVIRKGLDKHVAVSNALMDSYVRCGNISMARKLFGSLIYKD-AFSW 724
++ L + +KH L+D R G +S A L S ++D +W
Sbjct: 575 LVTQGLKYFQCMKNDYRINPNEKHFT---CLVDLLGRTGRLSDAENLILSSGFQDHPVTW 631
Query: 725 SVMINGYGLYGD 736
+++ +Y D
Sbjct: 632 RALLSSCRVYKD 643
>sp|Q9FLX6|PP430_ARATH Pentatricopeptide repeat-containing protein At5g52850,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H31 PE=2
SV=1
Length = 893
Score = 327 bits (838), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 204/743 (27%), Positives = 383/743 (51%), Gaps = 7/743 (0%)
Query: 157 CSSLSDLRIGREIHCVIFRTGYHQNLVIQTALVDFYAKKGEMLTARLLFDQIPLADLVSC 216
C S S RIG IHC + + G +NL + L+ Y K + AR LFD++ + +
Sbjct: 34 CESNSS-RIGLHIHCPVIKFGLLENLDLCNNLLSLYLKTDGIWNARKLFDEMSHRTVFAW 92
Query: 217 NTLMAGYSFNGLDQEALETFRRILTVGLKPNVSTFSSVIPVCTRLGHFCFGKSLHGFTIK 276
+++ ++ + AL F ++ G PN TFSSV+ C L +G +HG IK
Sbjct: 93 TVMISAFTKSQEFASALSLFEEMMASGTHPNEFTFSSVVRSCAGLRDISYGGRVHGSVIK 152
Query: 277 SGYLFDDFLVPALISMYAGDLDLSTARKLFDSLLEKNASVWNAMISAYTQSKKFFEAFEI 336
+G+ + + +L +Y+ A +LF SL + W MIS+ ++K+ EA +
Sbjct: 153 TGFEGNSVVGSSLSDLYSKCGQFKEACELFSSLQNADTISWTMMISSLVGARKWREALQF 212
Query: 337 FRQMIRAEMQPDLVTFVSIIPSCENYCSFQCGESLTACVIKNGLGNQPSVLTALLSMYAK 396
+ +M++A + P+ TFV ++ ++ + G+++ + +I G+ + T+L+ Y++
Sbjct: 213 YSEMVKAGVPPNEFTFVKLL-GASSFLGLEFGKTIHSNIIVRGIPLNVVLKTSLVDFYSQ 271
Query: 397 LGNIDSAKFLFDQIPNRNLLCWNAMMSAYVRNRFWDASLAVFRQMQFAGLNPDAVSIISV 456
++ A + + +++ W +++S +VRN ++ F +M+ GL P+ + ++
Sbjct: 272 FSKMEDAVRVLNSSGEQDVFLWTSVVSGFVRNLRAKEAVGTFLEMRSLGLQPNNFTYSAI 331
Query: 457 LSGCSKLDDVLLGKSAHAFSLRKGIVSNLDVLNALL-MFYSDGGQFSYAFTLFHRMSTRS 515
LS CS + + GK H+ +++ G + DV NAL+ M+ A +F M + +
Sbjct: 332 LSLCSAVRSLDFGKQIHSQTIKVGFEDSTDVGNALVDMYMKCSASEVEASRVFGAMVSPN 391
Query: 516 SVSWNTLISRCVQNGAVEEAVILLQRMQKEGVELDMVTLISFLPNLNKNGNIKQGMVIHG 575
VSW TLI V +G V++ LL M K VE ++VTL L +K ++++ + IH
Sbjct: 392 VVSWTTLILGLVDHGFVQDCFGLLMEMVKREVEPNVVTLSGVLRACSKLRHVRRVLEIHA 451
Query: 576 YAIKTGCVADVTFLNALITMYCNCGSTNDGRLCLLLFQMGDKREISLWNAIISVYVQTNK 635
Y ++ ++ N+L+ Y S+ + + +R+ + ++++ + + K
Sbjct: 452 YLLRRHVDGEMVVGNSLVDAY---ASSRKVDYAWNVIRSMKRRDNITYTSLVTRFNELGK 508
Query: 636 AKQAVAFFTELLGAGLEPDNVTVLSIISAGVLINSLNLTHSLMAFVIRKGLDKHVAVSNA 695
+ A++ + G G+ D +++ ISA + +L L + ++ G +V N+
Sbjct: 509 HEMALSVINYMYGDGIRMDQLSLPGFISASANLGALETGKHLHCYSVKSGFSGAASVLNS 568
Query: 696 LMDSYVRCGNISMARKLFGSLIYKDAFSWSVMINGYGLYGDGEAALELFKQMQLSGVRPN 755
L+D Y +CG++ A+K+F + D SW+ +++G G +AL F++M++ P+
Sbjct: 569 LVDMYSKCGSLEDAKKVFEEIATPDVVSWNGLVSGLASNGFISSALSAFEEMRMKETEPD 628
Query: 756 EITYLGVLSACSHAGLVEQSKMVFKSMVE-HGISQKMEHYACMVDLLGRTGHLNEAFIFV 814
+T+L +LSACS+ L + F+ M + + I ++EHY +V +LGR G L EA V
Sbjct: 629 SVTFLILLSACSNGRLTDLGLEYFQVMKKIYNIEPQVEHYVHLVGILGRAGRLEEATGVV 688
Query: 815 KKLPCKPSVSILESLLGACRIHGNVELGEIISGMLFEMDPENPGSYVMLHNIYASAGRWE 874
+ + KP+ I ++LL ACR GN+ LGE ++ + P +P Y++L ++Y +G+ E
Sbjct: 689 ETMHLKPNAMIFKTLLRACRYRGNLSLGEDMANKGLALAPSDPALYILLADLYDESGKPE 748
Query: 875 DAYRVRSCMKRSRLKKVPGFSLV 897
A + R+ M RL K G S V
Sbjct: 749 LAQKTRNLMTEKRLSKKLGKSTV 771
Score = 225 bits (573), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 144/562 (25%), Positives = 276/562 (49%), Gaps = 5/562 (0%)
Query: 104 FPIIKKPCVFLQNLMIRGLSNCGLHADLLHVYIKCRLSGCPSDDFTFPFLIKACSSLSDL 163
F + VF +MI + A L ++ + SG ++FTF ++++C+ L D+
Sbjct: 81 FDEMSHRTVFAWTVMISAFTKSQEFASALSLFEEMMASGTHPNEFTFSSVVRSCAGLRDI 140
Query: 164 RIGREIHCVIFRTGYHQNLVIQTALVDFYAKKGEMLTARLLFDQIPLADLVSCNTLMAGY 223
G +H + +TG+ N V+ ++L D Y+K G+ A LF + AD +S +++
Sbjct: 141 SYGGRVHGSVIKTGFEGNSVVGSSLSDLYSKCGQFKEACELFSSLQNADTISWTMMISSL 200
Query: 224 SFNGLDQEALETFRRILTVGLKPNVSTFSSVIPVCTRLGHFCFGKSLHGFTIKSGYLFDD 283
+EAL+ + ++ G+ PN TF ++ + LG FGK++H I G +
Sbjct: 201 VGARKWREALQFYSEMVKAGVPPNEFTFVKLLGASSFLG-LEFGKTIHSNIIVRGIPLNV 259
Query: 284 FLVPALISMYAGDLDLSTARKLFDSLLEKNASVWNAMISAYTQSKKFFEAFEIFRQMIRA 343
L +L+ Y+ + A ++ +S E++ +W +++S + ++ + EA F +M
Sbjct: 260 VLKTSLVDFYSQFSKMEDAVRVLNSSGEQDVFLWTSVVSGFVRNLRAKEAVGTFLEMRSL 319
Query: 344 EMQPDLVTFVSIIPSCENYCSFQCGESLTACVIKNGLGNQPSVLTALLSMYAKLGNID-S 402
+QP+ T+ +I+ C S G+ + + IK G + V AL+ MY K +
Sbjct: 320 GLQPNNFTYSAILSLCSAVRSLDFGKQIHSQTIKVGFEDSTDVGNALVDMYMKCSASEVE 379
Query: 403 AKFLFDQIPNRNLLCWNAMMSAYVRNRFWDASLAVFRQMQFAGLNPDAVSIISVLSGCSK 462
A +F + + N++ W ++ V + F + +M + P+ V++ VL CSK
Sbjct: 380 ASRVFGAMVSPNVVSWTTLILGLVDHGFVQDCFGLLMEMVKREVEPNVVTLSGVLRACSK 439
Query: 463 LDDVLLGKSAHAFSLRKGIVSNLDVLNALLMFYSDGGQFSYAFTLFHRMSTRSSVSWNTL 522
L V HA+ LR+ + + V N+L+ Y+ + YA+ + M R ++++ +L
Sbjct: 440 LRHVRRVLEIHAYLLRRHVDGEMVVGNSLVDAYASSRKVDYAWNVIRSMKRRDNITYTSL 499
Query: 523 ISRCVQNGAVEEAVILLQRMQKEGVELDMVTLISFLPNLNKNGNIKQGMVIHGYAIKTGC 582
++R + G E A+ ++ M +G+ +D ++L F+ G ++ G +H Y++K+G
Sbjct: 500 VTRFNELGKHEMALSVINYMYGDGIRMDQLSLPGFISASANLGALETGKHLHCYSVKSGF 559
Query: 583 VADVTFLNALITMYCNCGSTNDGRLCLLLFQMGDKREISLWNAIISVYVQTNKAKQAVAF 642
+ LN+L+ MY CGS D + +F+ ++ WN ++S A++
Sbjct: 560 SGAASVLNSLVDMYSKCGSLEDAK---KVFEEIATPDVVSWNGLVSGLASNGFISSALSA 616
Query: 643 FTELLGAGLEPDNVTVLSIISA 664
F E+ EPD+VT L ++SA
Sbjct: 617 FEEMRMKETEPDSVTFLILLSA 638
Score = 200 bits (508), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 143/559 (25%), Positives = 258/559 (46%), Gaps = 9/559 (1%)
Query: 258 CTRLGHFC------FGKSLHGFTIKSGYLFDDFLVPALISMYAGDLDLSTARKLFDSLLE 311
C R+ FC G +H IK G L + L L+S+Y + ARKLFD +
Sbjct: 27 CIRILSFCESNSSRIGLHIHCPVIKFGLLENLDLCNNLLSLYLKTDGIWNARKLFDEMSH 86
Query: 312 KNASVWNAMISAYTQSKKFFEAFEIFRQMIRAEMQPDLVTFVSIIPSCENYCSFQCGESL 371
+ W MISA+T+S++F A +F +M+ + P+ TF S++ SC G +
Sbjct: 87 RTVFAWTVMISAFTKSQEFASALSLFEEMMASGTHPNEFTFSSVVRSCAGLRDISYGGRV 146
Query: 372 TACVIKNGLGNQPSVLTALLSMYAKLGNIDSAKFLFDQIPNRNLLCWNAMMSAYVRNRFW 431
VIK G V ++L +Y+K G A LF + N + + W M+S+ V R W
Sbjct: 147 HGSVIKTGFEGNSVVGSSLSDLYSKCGQFKEACELFSSLQNADTISWTMMISSLVGARKW 206
Query: 432 DASLAVFRQMQFAGLNPDAVSIISVLSGCSKLDDVLLGKSAHAFSLRKGIVSNLDVLNAL 491
+L + +M AG+ P+ + + +L G S + GK+ H+ + +GI N+ + +L
Sbjct: 207 REALQFYSEMVKAGVPPNEFTFVKLL-GASSFLGLEFGKTIHSNIIVRGIPLNVVLKTSL 265
Query: 492 LMFYSDGGQFSYAFTLFHRMSTRSSVSWNTLISRCVQNGAVEEAVILLQRMQKEGVELDM 551
+ FYS + A + + + W +++S V+N +EAV M+ G++ +
Sbjct: 266 VDFYSQFSKMEDAVRVLNSSGEQDVFLWTSVVSGFVRNLRAKEAVGTFLEMRSLGLQPNN 325
Query: 552 VTLISFLPNLNKNGNIKQGMVIHGYAIKTGCVADVTFLNALITMYCNCGSTNDGRLCLLL 611
T + L + ++ G IH IK G NAL+ MY C S ++ +
Sbjct: 326 FTYSAILSLCSAVRSLDFGKQIHSQTIKVGFEDSTDVGNALVDMYMKC-SASEVEASRVF 384
Query: 612 FQMGDKREISLWNAIISVYVQTNKAKQAVAFFTELLGAGLEPDNVTVLSIISAGVLINSL 671
M +S W +I V + E++ +EP+ VT+ ++ A + +
Sbjct: 385 GAMVSPNVVS-WTTLILGLVDHGFVQDCFGLLMEMVKREVEPNVVTLSGVLRACSKLRHV 443
Query: 672 NLTHSLMAFVIRKGLDKHVAVSNALMDSYVRCGNISMARKLFGSLIYKDAFSWSVMINGY 731
+ A+++R+ +D + V N+L+D+Y + A + S+ +D +++ ++ +
Sbjct: 444 RRVLEIHAYLLRRHVDGEMVVGNSLVDAYASSRKVDYAWNVIRSMKRRDNITYTSLVTRF 503
Query: 732 GLYGDGEAALELFKQMQLSGVRPNEITYLGVLSACSHAGLVEQSKMVFKSMVEHGISQKM 791
G E AL + M G+R ++++ G +SA ++ G +E K + V+ G S
Sbjct: 504 NELGKHEMALSVINYMYGDGIRMDQLSLPGFISASANLGALETGKHLHCYSVKSGFSGAA 563
Query: 792 EHYACMVDLLGRTGHLNEA 810
+VD+ + G L +A
Sbjct: 564 SVLNSLVDMYSKCGSLEDA 582
Score = 91.3 bits (225), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 62/258 (24%), Positives = 116/258 (44%)
Query: 104 FPIIKKPCVFLQNLMIRGLSNCGLHADLLHVYIKCRLSGCPSDDFTFPFLIKACSSLSDL 163
F + P V +I GL + G D + ++ + T +++ACS L +
Sbjct: 384 FGAMVSPNVVSWTTLILGLVDHGFVQDCFGLLMEMVKREVEPNVVTLSGVLRACSKLRHV 443
Query: 164 RIGREIHCVIFRTGYHQNLVIQTALVDFYAKKGEMLTARLLFDQIPLADLVSCNTLMAGY 223
R EIH + R +V+ +LVD YA ++ A + + D ++ +L+ +
Sbjct: 444 RRVLEIHAYLLRRHVDGEMVVGNSLVDAYASSRKVDYAWNVIRSMKRRDNITYTSLVTRF 503
Query: 224 SFNGLDQEALETFRRILTVGLKPNVSTFSSVIPVCTRLGHFCFGKSLHGFTIKSGYLFDD 283
+ G + AL + G++ + + I LG GK LH +++KSG+
Sbjct: 504 NELGKHEMALSVINYMYGDGIRMDQLSLPGFISASANLGALETGKHLHCYSVKSGFSGAA 563
Query: 284 FLVPALISMYAGDLDLSTARKLFDSLLEKNASVWNAMISAYTQSKKFFEAFEIFRQMIRA 343
++ +L+ MY+ L A+K+F+ + + WN ++S + A F +M
Sbjct: 564 SVLNSLVDMYSKCGSLEDAKKVFEEIATPDVVSWNGLVSGLASNGFISSALSAFEEMRMK 623
Query: 344 EMQPDLVTFVSIIPSCEN 361
E +PD VTF+ ++ +C N
Sbjct: 624 ETEPDSVTFLILLSACSN 641
>sp|Q5G1T1|PP272_ARATH Pentatricopeptide repeat-containing protein At3g49170,
chloroplastic OS=Arabidopsis thaliana GN=EMB2261 PE=2
SV=1
Length = 850
Score = 326 bits (836), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 207/671 (30%), Positives = 346/671 (51%), Gaps = 19/671 (2%)
Query: 243 GLKPNVS-TFSSVIPVCTRLGHFCFGKSLHGFTIKSGYLFDDFLVPALISMYAGDLDLST 301
G++P S TFSS++ C R F GK +H I+ D L +LIS+Y+ D +
Sbjct: 56 GIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSGDSAK 115
Query: 302 ARKLFDSLL---EKNASVWNAMISAYTQSKKFFEAFEIFRQMIRAEMQPDLVTFVSIIPS 358
A +F+++ +++ W+AM++ Y + + +A ++F + + + P+ + ++I +
Sbjct: 116 AEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRA 175
Query: 359 CENYCSFQCGESLTACVIKNG-LGNQPSVLTALLSMYAKLGN-IDSAKFLFDQIPNRNLL 416
C N G ++K G + V +L+ M+ K N ++A +FD++ N++
Sbjct: 176 CSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVV 235
Query: 417 CWNAMMSAYVRNRFWDASLAVFRQMQFAGLNPDAVSIISVLSGCSKLDDVLLGKSAHAFS 476
W M++ ++ F ++ F M +G D ++ SV S C++L+++ LGK H+++
Sbjct: 236 TWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQLHSWA 295
Query: 477 LRKGIVSNLDVLNALLMFY---SDGGQFSYAFTLFHRMSTRSSVSWNTLISRCVQN-GAV 532
+R G+V DV +L+ Y S G +F RM S +SW LI+ ++N
Sbjct: 296 IRSGLVD--DVECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLA 353
Query: 533 EEAVILLQRMQKEG-VELDMVTLISFLPNLNKNGNIKQGMVIHGYAIKTGCVADVTFLNA 591
EA+ L M +G VE + T S + + G + G A K G ++ + N+
Sbjct: 354 TEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNSSVANS 413
Query: 592 LITMYCNCGSTNDGRLCLLLFQMGDKREISLWNAIISVYVQTNKAKQAVAFFTELLGAGL 651
+I+M+ D + F+ ++ + +N + + +QA +E+ L
Sbjct: 414 VISMFVKSDRMEDAQRA---FESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITEREL 470
Query: 652 EPDNVTVLSIISAGVLINSLNLTHSLMAFVIRKGLDKHVAVSNALMDSYVRCGNISMARK 711
T S++S + S+ + + V++ GL + V NAL+ Y +CG+I A +
Sbjct: 471 GVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASR 530
Query: 712 LFGSLIYKDAFSWSVMINGYGLYGDGEAALELFKQMQLSGVRPNEITYLGVLSACSHAGL 771
+F + ++ SW+ MI G+ +G LE F QM GV+PNE+TY+ +LSACSH GL
Sbjct: 531 VFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSACSHVGL 590
Query: 772 VEQSKMVFKSMVE-HGISQKMEHYACMVDLLGRTGHLNEAFIFVKKLPCKPSVSILESLL 830
V + F SM E H I KMEHYACMVDLL R G L +AF F+ +P + V + + L
Sbjct: 591 VSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFINTMPFQADVLVWRTFL 650
Query: 831 GACRIHGNVELGEIISGMLFEMDPENPGSYVMLHNIYASAGRWEDAYRVRSCMKRSRLKK 890
GACR+H N ELG++ + + E+DP P +Y+ L NIYA AG+WE++ +R MK L K
Sbjct: 651 GACRVHSNTELGKLAARKILELDPNEPAAYIQLSNIYACAGKWEESTEMRRKMKERNLVK 710
Query: 891 VPGFSL--VGD 899
G S VGD
Sbjct: 711 EGGCSWIEVGD 721
Score = 232 bits (592), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 177/710 (24%), Positives = 332/710 (46%), Gaps = 31/710 (4%)
Query: 102 SSFPIIKKPCV-----FLQNLMIRGLSNCGLHADLLHVYIKCRLSGCPSDDFTFPFLIKA 156
+ PI +P V L++R L+ L + + + R P D TF L+K+
Sbjct: 12 AKLPIKSQPSVSNRINVADRLILRHLNAGDLRGAVSALDLMARDGIRPMDSVTFSSLLKS 71
Query: 157 CSSLSDLRIGREIHCVIFRTGYHQNLVIQTALVDFYAKKGEMLTARLLFD---QIPLADL 213
C D R+G+ +H + + V+ +L+ Y+K G+ A +F+ + D+
Sbjct: 72 CIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSGDSAKAEDVFETMRRFGKRDV 131
Query: 214 VSCNTLMAGYSFNGLDQEALETFRRILTVGLKPNVSTFSSVIPVCTRLGHFCFGKSLHGF 273
VS + +MA Y NG + +A++ F L +GL PN +++VI C+ G+ GF
Sbjct: 132 VSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRACSNSDFVGVGRVTLGF 191
Query: 274 TIKSGYLFDDFLVP-ALISMYA-GDLDLSTARKLFDSLLEKNASVWNAMISAYTQSKKFF 331
+K+G+ D V +LI M+ G+ A K+FD + E N W MI+ Q
Sbjct: 192 LMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPR 251
Query: 332 EAFEIFRQMIRAEMQPDLVTFVSIIPSCENYCSFQCGESLTACVIKNGLGNQPSVLTALL 391
EA F M+ + + D T S+ +C + G+ L + I++GL + V +L+
Sbjct: 252 EAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQLHSWAIRSGLVDD--VECSLV 309
Query: 392 SMYAKL---GNIDSAKFLFDQIPNRNLLCWNAMMSAYVRN-RFWDASLAVFRQMQFAG-L 446
MYAK G++D + +FD++ + +++ W A+++ Y++N ++ +F +M G +
Sbjct: 310 DMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHV 369
Query: 447 NPDAVSIISVLSGCSKLDDVLLGKSAHAFSLRKGIVSNLDVLNALLMFYSDGGQFSYAFT 506
P+ + S C L D +GK + ++G+ SN V N+++ + + A
Sbjct: 370 EPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQR 429
Query: 507 LFHRMSTRSSVSWNTLISRCVQNGAVEEAVILLQRMQKEGVELDMVTLISFLPNLNKNGN 566
F +S ++ VS+NT + +N E+A LL + + + + T S L + G+
Sbjct: 430 AFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGS 489
Query: 567 IKQGMVIHGYAIKTGCVADVTFLNALITMYCNCGSTNDGRLCLLLFQMGDKREISLWNAI 626
I++G IH +K G + NALI+MY CGS + +F + R + W ++
Sbjct: 490 IRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTAS---RVFNFMENRNVISWTSM 546
Query: 627 ISVYVQTNKAKQAVAFFTELLGAGLEPDNVTVLSIISA----GVLINSLNLTHSLMAFVI 682
I+ + + A + + F +++ G++P+ VT ++I+SA G++ +S+
Sbjct: 547 ITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHK 606
Query: 683 RKGLDKHVAVSNALMDSYVRCGNISMARKLFGSLIYK-DAFSWSVMINGYGLYGDGE-AA 740
K +H A ++D R G ++ A + ++ ++ D W + ++ + E
Sbjct: 607 IKPKMEHYA---CMVDLLCRAGLLTDAFEFINTMPFQADVLVWRTFLGACRVHSNTELGK 663
Query: 741 LELFKQMQLSGVRPNEITYLGVLSACSHAGLVEQSKMVFKSMVEHGISQK 790
L K ++L P L + AC AG E+S + + M E + ++
Sbjct: 664 LAARKILELDPNEPAAYIQLSNIYAC--AGKWEESTEMRRKMKERNLVKE 711
Score = 179 bits (454), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 126/440 (28%), Positives = 217/440 (49%), Gaps = 11/440 (2%)
Query: 95 TSYHIALSSFPIIKKPCVFLQNLMIRGLSNCGLHADLLHVYIKCRLSGCPSDDFTFPFLI 154
S+ A F + + V LMI G + + ++ LSG SD FT +
Sbjct: 217 NSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVF 276
Query: 155 KACSSLSDLRIGREIHCVIFRTGYHQNLVIQTALVDFYAK---KGEMLTARLLFDQIPLA 211
AC+ L +L +G+++H R+G + ++ +LVD YAK G + R +FD++
Sbjct: 277 SACAELENLSLGKQLHSWAIRSGLVDD--VECSLVDMYAKCSADGSVDDCRKVFDRMEDH 334
Query: 212 DLVSCNTLMAGYSFN-GLDQEALETFRRILTVG-LKPNVSTFSSVIPVCTRLGHFCFGKS 269
++S L+ GY N L EA+ F ++T G ++PN TFSS C L GK
Sbjct: 335 SVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQ 394
Query: 270 LHGFTIKSGYLFDDFLVPALISMYAGDLDLSTARKLFDSLLEKNASVWNAMISAYTQSKK 329
+ G K G + + ++ISM+ + A++ F+SL EKN +N + ++
Sbjct: 395 VLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLN 454
Query: 330 FFEAFEIFRQMIRAEMQPDLVTFVSIIPSCENYCSFQCGESLTACVIKNGLG-NQPSVLT 388
F +AF++ ++ E+ TF S++ N S + GE + + V+K GL NQP V
Sbjct: 455 FEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQP-VCN 513
Query: 389 ALLSMYAKLGNIDSAKFLFDQIPNRNLLCWNAMMSAYVRNRFWDASLAVFRQMQFAGLNP 448
AL+SMY+K G+ID+A +F+ + NRN++ W +M++ + ++ F L F QM G+ P
Sbjct: 514 ALISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKP 573
Query: 449 DAVSIISVLSGCSKLDDVLLG-KSAHAFSLRKGIVSNLDVLNALLMFYSDGGQFSYAFTL 507
+ V+ +++LS CS + V G + ++ I ++ ++ G + AF
Sbjct: 574 NEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEF 633
Query: 508 FHRMSTRSSV-SWNTLISRC 526
+ M ++ V W T + C
Sbjct: 634 INTMPFQADVLVWRTFLGAC 653
>sp|Q9SVH0|PP329_ARATH Pentatricopeptide repeat-containing protein At4g20770
OS=Arabidopsis thaliana GN=PCMP-E35 PE=3 SV=2
Length = 774
Score = 325 bits (833), Expect = 9e-88, Method: Compositional matrix adjust.
Identities = 217/788 (27%), Positives = 384/788 (48%), Gaps = 58/788 (7%)
Query: 129 ADLLHVYI--KCRLSGCPSDDFTFPFLIKACSSLSDLRIGREIHC-------VIFRTGYH 179
A LL Y +C+LSG F +K+ + L + + I C +F
Sbjct: 10 ASLLRCYRDERCKLSGKVIHGFIVRMGMKSDTYLCNRLLDLYIECGDGDYARKVFDEMSV 69
Query: 180 QNLVIQTALVDFYAKKGEMLTARLLFDQIPLADLVSCNTLMAGYSFNGLDQEALETFRRI 239
+++ A + F K G++ A +FD +P D+VS N +++ G +++AL ++R+
Sbjct: 70 RDVYSWNAFLTFRCKVGDLGEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALVVYKRM 129
Query: 240 LTVGLKPNVSTFSSVIPVCTRLGHFCFGKSLHGFTIKSGYLFDDFLVPALISMYAG-DLD 298
+ G P+ T +SV+ C+++ FG HG +K+G + F+ AL+SMYA
Sbjct: 130 VCDGFLPSRFTLASVLSACSKVLDGVFGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGFI 189
Query: 299 LSTARKLFDSLLEKNASVWNAMISAYTQSKKFFEAFEIFRQMIRAEMQPDLVTFVSII-- 356
+ ++F+SL + N + A+I + K EA ++FR M +Q D V +I+
Sbjct: 190 VDYGVRVFESLSQPNEVSYTAVIGGLARENKVLEAVQMFRLMCEKGVQVDSVCLSNILSI 249
Query: 357 ----PSCENYCSF---QCGESLTACVIKNGLGNQPSVLTALLSMYAKLGNIDSAKFLFDQ 409
C++ + G+ + ++ G G + +LL +YAK +++ A+ +F +
Sbjct: 250 SAPREGCDSLSEIYGNELGKQIHCLALRLGFGGDLHLNNSLLEIYAKNKDMNGAELIFAE 309
Query: 410 IPNRNLLCWNAMMSAYVRNRFWDASLAVFRQMQFAGLNPDAVSIISVLSGCSKLDDVLLG 469
+P N++ WN M+ + + D S+ +M+ +G P+ V+ ISVL C + DV G
Sbjct: 310 MPEVNVVSWNIMIVGFGQEYRSDKSVEFLTRMRDSGFQPNEVTCISVLGACFRSGDVETG 369
Query: 470 KSAHAFSLRKGIVSNLDVLNALLMFYSDGGQFSYAFTLFHRMSTRSSVSWNTLISRCVQN 529
+ +F + S +WN ++S
Sbjct: 370 R-----------------------------------RIFSSIPQPSVSAWNAMLSGYSNY 394
Query: 530 GAVEEAVILLQRMQKEGVELDMVTLISFLPNLNKNGNIKQGMVIHGYAIKTGCVADVTFL 589
EEA+ ++MQ + ++ D TL L + + ++ G IHG I+T + +
Sbjct: 395 EHYEEAISNFRQMQFQNLKPDKTTLSVILSSCARLRFLEGGKQIHGVVIRTEISKNSHIV 454
Query: 590 NALITMYCNCGSTNDGRLCLLLFQMGDKREISLWNAIISVYVQTNKAKQAVAFFTEL-LG 648
+ LI +Y C + ++ +I+ WN++IS + +A+ F +
Sbjct: 455 SGLIAVYSECEKMEISEC--IFDDCINELDIACWNSMISGFRHNMLDTKALILFRRMHQT 512
Query: 649 AGLEPDNVTVLSIISAGVLINSLNLTHSLMAFVIRKGLDKHVAVSNALMDSYVRCGNISM 708
A L P+ + +++S+ + SL V++ G V AL D Y +CG I
Sbjct: 513 AVLCPNETSFATVLSSCSRLCSLLHGRQFHGLVVKSGYVSDSFVETALTDMYCKCGEIDS 572
Query: 709 ARKLFGSLIYKDAFSWSVMINGYGLYGDGEAALELFKQMQLSGVRPNEITYLGVLSACSH 768
AR+ F +++ K+ W+ MI+GYG G G+ A+ L+++M SG +P+ IT++ VL+ACSH
Sbjct: 573 ARQFFDAVLRKNTVIWNEMIHGYGHNGRGDEAVGLYRKMISSGEKPDGITFVSVLTACSH 632
Query: 769 AGLVEQSKMVFKSMVE-HGISQKMEHYACMVDLLGRTGHLNEAFIFVKKLPCKPSVSILE 827
+GLVE + SM HGI +++HY C+VD LGR G L +A + P K S + E
Sbjct: 633 SGLVETGLEILSSMQRIHGIEPELDHYICIVDCLGRAGRLEDAEKLAEATPYKSSSVLWE 692
Query: 828 SLLGACRIHGNVELGEIISGMLFEMDPENPGSYVMLHNIYASAGRWEDAYRVRSCMKRSR 887
LL +CR+HG+V L ++ L +DP++ +YV+L N Y+S +W+D+ ++ M ++R
Sbjct: 693 ILLSSCRVHGDVSLARRVAEKLMRLDPQSSAAYVLLSNTYSSLRQWDDSAALQGLMNKNR 752
Query: 888 LKKVPGFS 895
+ K PG S
Sbjct: 753 VHKTPGQS 760
Score = 214 bits (544), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 156/639 (24%), Positives = 292/639 (45%), Gaps = 60/639 (9%)
Query: 116 NLMIRGLSNCGLHADLLHVYIKCRLSGCPSDDFTFPFLIKACSSLSDLRIGREIHCVIFR 175
N MI L G L VY + G FT ++ ACS + D G H V +
Sbjct: 107 NNMISVLVRKGFEEKALVVYKRMVCDGFLPSRFTLASVLSACSKVLDGVFGMRCHGVAVK 166
Query: 176 TGYHQNLVIQTALVDFYAKKGEMLTARL-LFDQIPLADLVSCNTLMAGYSFNGLDQEALE 234
TG +N+ + AL+ YAK G ++ + +F+ + + VS ++ G + EA++
Sbjct: 167 TGLDKNIFVGNALLSMYAKCGFIVDYGVRVFESLSQPNEVSYTAVIGGLARENKVLEAVQ 226
Query: 235 TFRRILTVGLKPNVSTFSSVIPV------CTRLGHFC---FGKSLHGFTIKSGYLFDDFL 285
FR + G++ + S+++ + C L GK +H ++ G+ D L
Sbjct: 227 MFRLMCEKGVQVDSVCLSNILSISAPREGCDSLSEIYGNELGKQIHCLALRLGFGGDLHL 286
Query: 286 VPALISMYAGDLDLSTARKLFDSLLEKNASVWNAMISAYTQSKKFFEAFEIFRQMIRAEM 345
+L+ +YA + D++ A +F + E N WN MI + Q + ++ E +M +
Sbjct: 287 NNSLLEIYAKNKDMNGAELIFAEMPEVNVVSWNIMIVGFGQEYRSDKSVEFLTRMRDSGF 346
Query: 346 QPDLVTFVSIIPSCENYCSFQCGESLTACVIKNGLGNQPSVLTALLSMYAKLGNIDSAKF 405
QP+ VT +S++ +C + G++++ +
Sbjct: 347 QPNEVTCISVLGAC-----------------------------------FRSGDVETGRR 371
Query: 406 LFDQIPNRNLLCWNAMMSAYVRNRFWDASLAVFRQMQFAGLNPDAVSIISVLSGCSKLDD 465
+F IP ++ WNAM+S Y ++ +++ FRQMQF L PD ++ +LS C++L
Sbjct: 372 IFSSIPQPSVSAWNAMLSGYSNYEHYEEAISNFRQMQFQNLKPDKTTLSVILSSCARLRF 431
Query: 466 VLLGKSAHAFSLRKGIVSNLDVLNALLMFYSDGGQFSYAFTLFHRMSTRSSVS-WNTLIS 524
+ GK H +R I N +++ L+ YS+ + + +F ++ WN++IS
Sbjct: 432 LEGGKQIHGVVIRTEISKNSHIVSGLIAVYSECEKMEISECIFDDCINELDIACWNSMIS 491
Query: 525 RCVQNGAVEEAVILLQRMQKEGVEL-DMVTLISFLPNLNKNGNIKQGMVIHGYAIKTGCV 583
N +A+IL +RM + V + + + L + ++ ++ G HG +K+G V
Sbjct: 492 GFRHNMLDTKALILFRRMHQTAVLCPNETSFATVLSSCSRLCSLLHGRQFHGLVVKSGYV 551
Query: 584 ADVTFLNALITMYCNCGSTNDGRLCLLLFQMGDKREISLWNAIISVYVQTNKAKQAVAFF 643
+D AL MYC CG + R F ++ +WN +I Y + +AV +
Sbjct: 552 SDSFVETALTDMYCKCGEIDSAR---QFFDAVLRKNTVIWNEMIHGYGHNGRGDEAVGLY 608
Query: 644 TELLGAGLEPDNVTVLSIISA----GVLINSLNLTHSLMAF-VIRKGLDKHVAVSNALMD 698
+++ +G +PD +T +S+++A G++ L + S+ I LD ++ + +D
Sbjct: 609 RKMISSGEKPDGITFVSVLTACSHSGLVETGLEILSSMQRIHGIEPELDHYICI----VD 664
Query: 699 SYVRCGNISMARKLFGSLIYK-DAFSWSVMINGYGLYGD 736
R G + A KL + YK + W ++++ ++GD
Sbjct: 665 CLGRAGRLEDAEKLAEATPYKSSSVLWEILLSSCRVHGD 703
Score = 163 bits (413), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 103/359 (28%), Positives = 187/359 (52%), Gaps = 6/359 (1%)
Query: 104 FPIIKKPCVFLQNLMIRGLSNCGLHADLLHVYIKCRLSGCPSDDFTFPFLIKACSSLSDL 163
F I +P V N M+ G SN + + + + + + D T ++ +C+ L L
Sbjct: 373 FSSIPQPSVSAWNAMLSGYSNYEHYEEAISNFRQMQFQNLKPDKTTLSVILSSCARLRFL 432
Query: 164 RIGREIHCVIFRTGYHQNLVIQTALVDFYAKKGEMLTARLLFDQ-IPLADLVSCNTLMAG 222
G++IH V+ RT +N I + L+ Y++ +M + +FD I D+ N++++G
Sbjct: 433 EGGKQIHGVVIRTEISKNSHIVSGLIAVYSECEKMEISECIFDDCINELDIACWNSMISG 492
Query: 223 YSFNGLDQEALETFRRI-LTVGLKPNVSTFSSVIPVCTRLGHFCFGKSLHGFTIKSGYLF 281
+ N LD +AL FRR+ T L PN ++F++V+ C+RL G+ HG +KSGY+
Sbjct: 493 FRHNMLDTKALILFRRMHQTAVLCPNETSFATVLSSCSRLCSLLHGRQFHGLVVKSGYVS 552
Query: 282 DDFLVPALISMYAGDLDLSTARKLFDSLLEKNASVWNAMISAYTQSKKFFEAFEIFRQMI 341
D F+ AL MY ++ +AR+ FD++L KN +WN MI Y + + EA ++R+MI
Sbjct: 553 DSFVETALTDMYCKCGEIDSARQFFDAVLRKNTVIWNEMIHGYGHNGRGDEAVGLYRKMI 612
Query: 342 RAEMQPDLVTFVSIIPSCENYCSFQCG-ESLTACVIKNGLGNQPSVLTALLSMYAKLGNI 400
+ +PD +TFVS++ +C + + G E L++ +G+ + ++ + G +
Sbjct: 613 SSGEKPDGITFVSVLTACSHSGLVETGLEILSSMQRIHGIEPELDHYICIVDCLGRAGRL 672
Query: 401 DSAKFLFDQIPNR-NLLCWNAMMSAYVRNRFWDASLAVFRQMQFAGLNPDAVSIISVLS 458
+ A+ L + P + + + W ++S+ D SLA + L+P + + +LS
Sbjct: 673 EDAEKLAEATPYKSSSVLWEILLSSC--RVHGDVSLARRVAEKLMRLDPQSSAAYVLLS 729
>sp|Q9LUJ2|PP249_ARATH Pentatricopeptide repeat-containing protein At3g22690
OS=Arabidopsis thaliana GN=PCMP-H56 PE=2 SV=1
Length = 842
Score = 323 bits (829), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 201/631 (31%), Positives = 327/631 (51%), Gaps = 32/631 (5%)
Query: 299 LSTARKLFDSLLEKNAS-VWNAMISAYTQSKKFFEAFEIFRQMIRAEMQPDLVTFVSIIP 357
LS A+++F++ ++N++I Y S EA +F +M+ + + PD TF +
Sbjct: 83 LSFAKEVFENSESYGTCFMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLS 142
Query: 358 SCENYCSFQCGESLTACVIKNGLGNQPSVLTALLSMYAKLGNIDSAKFLFDQIPNRNLLC 417
+C + G + ++K G V +L+ YA+ G +DSA+ +FD++ RN++
Sbjct: 143 ACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVS 202
Query: 418 WNAMMSAYVRNRFW-DASLAVFRQMQFAGLNPDAVSIISVLSGCSKLDDVLLGKSAHAFS 476
W +M+ Y R F DA FR ++ + P++V+++ V+S C+KL+D+ G+ +AF
Sbjct: 203 WTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFI 262
Query: 477 LRKGIVSNLDVLNALLMFYSDGGQFSYAFTLFHRMSTRSSVSWNTLISRCVQNGAVEEAV 536
GI N +++AL+ Y A LF + N + S V+ G EA+
Sbjct: 263 RNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREAL 322
Query: 537 ILLQRMQKEGVELDMVTLISFLPNLNKNGNIKQGMVIHGYAIKTGCVADVTFLNALITMY 596
+ M GV D ++++S + + ++ NI G HGY ++ G + NALI MY
Sbjct: 323 GVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMY 382
Query: 597 CNC--------------------------GSTNDGRL--CLLLFQMGDKREISLWNAIIS 628
C G +G + F+ ++ I WN IIS
Sbjct: 383 MKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIIS 442
Query: 629 VYVQTNKAKQAVAFFTELLG-AGLEPDNVTVLSIISAGVLINSLNLTHSLMAFVIRKGLD 687
VQ + ++A+ F + G+ D VT++SI SA + +L+L + ++ + G+
Sbjct: 443 GLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQ 502
Query: 688 KHVAVSNALMDSYVRCGNISMARKLFGSLIYKDAFSWSVMINGYGLYGDGEAALELFKQM 747
V + L+D + RCG+ A +F SL +D +W+ I + G+ E A+ELF M
Sbjct: 503 LDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDM 562
Query: 748 QLSGVRPNEITYLGVLSACSHAGLVEQSKMVFKSMVE-HGISQKMEHYACMVDLLGRTGH 806
G++P+ + ++G L+ACSH GLV+Q K +F SM++ HG+S + HY CMVDLLGR G
Sbjct: 563 IEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGL 622
Query: 807 LNEAFIFVKKLPCKPSVSILESLLGACRIHGNVELGEIISGMLFEMDPENPGSYVMLHNI 866
L EA ++ +P +P+ I SLL ACR+ GNVE+ + + + PE GSYV+L N+
Sbjct: 623 LEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLLSNV 682
Query: 867 YASAGRWEDAYRVRSCMKRSRLKKVPGFSLV 897
YASAGRW D +VR MK L+K PG S +
Sbjct: 683 YASAGRWNDMAKVRLSMKEKGLRKPPGTSSI 713
Score = 246 bits (628), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 204/763 (26%), Positives = 343/763 (44%), Gaps = 95/763 (12%)
Query: 151 PFLIKACSSLSDLRIGREIHCVIFRTGYHQNLVIQTALVDFYAKKG--EMLT-ARLLFDQ 207
P +K C ++ +L++ H + + G ++ T LV + G E L+ A+ +F+
Sbjct: 36 PSSLKNCKTIDELKM---FHRSLTKQGLDNDVSTITKLVARSCELGTRESLSFAKEVFEN 92
Query: 208 IPLADLVSC---NTLMAGYSFNGLDQEALETFRRILTVGLKPNVSTFSSVIPVCTRLGHF 264
+C N+L+ GY+ +GL EA+ F R++ G+ P+ TF + C +
Sbjct: 93 SE--SYGTCFMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAK 150
Query: 265 CFGKSLHGFTIKSGYLFDDFLVPALISMYAGDLDLSTARKLFDSLLEKNASVWNAMISAY 324
G +HG +K GY D F+ +L+ YA +L +ARK+FD + E+N W +MI Y
Sbjct: 151 GNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGY 210
Query: 325 TQSKKFFEAFEIFRQMIR-AEMQPDLVTFVSIIPSCENYCSFQCGESLTACVIKNGLGNQ 383
+ +A ++F +M+R E+ P+ VT V +I +C + GE + A + +G+
Sbjct: 211 ARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVN 270
Query: 384 PSVLTALLSMYAKLGNIDSAKFLFDQIPNRNLLCWNAMMSAYVRNRFWDASLAVFRQMQF 443
+++AL+ MY K ID AK LFD+ NL NAM S YVR +L VF M
Sbjct: 271 DLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMD 330
Query: 444 AGLNPDAVSIISVLSGCSKLDDVLLGKSAHAFSLRKGIVSNLDVLNALLMFYSDGGQFSY 503
+G+ PD +S++S +S CS+L ++L GKS H + LR G S ++ NAL+ Y +
Sbjct: 331 SGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDT 390
Query: 504 AFTLFHRMSTRSSVSWNTLISRCVQNGAV------------------------------- 532
AF +F RMS ++ V+WN++++ V+NG V
Sbjct: 391 AFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLF 450
Query: 533 EEAVILLQRMQ-KEGVELDMVTLISFLPNLNKNGNIKQGMVIHGYAIKTGCVADVTFLNA 591
EEA+ + MQ +EGV D VT++S G + I+ Y K G DV
Sbjct: 451 EEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTT 510
Query: 592 LITMYCNCGSTNDGRLCLLLFQMGDKREISLWNAIISVYVQTNKAKQAVAFFTELLGAGL 651
L+ M+ CG D + +F R++S W A I A++A+ F +++ GL
Sbjct: 511 LVDMFSRCG---DPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGL 567
Query: 652 EPDNVTVLSIISA----GVLINSLNLTHSLMAFVIRKGLDKHVAVSNALMDSYVRCGNIS 707
+PD V + ++A G++ + +S++
Sbjct: 568 KPDGVAFVGALTACSHGGLVQQGKEIFYSML----------------------------- 598
Query: 708 MARKLFGSLIYKDAFSWSVMINGYGLYGDGEAALELFKQMQLSGVRPNEITYLGVLSACS 767
KL G + + + M++ G G E A++L + M + PN++ + +L+AC
Sbjct: 599 ---KLHG--VSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPM---EPNDVIWNSLLAACR 650
Query: 768 HAGLVEQSKMVFKSMVEHGISQKMEHYACMVDLLGRTGHLNEAFIFVKKLPCKPSVSILE 827
G VE + + ++ ++ Y + ++ G N+ + K+ L
Sbjct: 651 VQGNVEMAAYAAEK-IQVLAPERTGSYVLLSNVYASAGRWND----MAKVRLSMKEKGLR 705
Query: 828 SLLGACRIHGNVELGEIISGMLFEMDPENPGSYVMLHNIYASA 870
G I + E SG E PE P ML + A
Sbjct: 706 KPPGTSSIQIRGKTHEFTSG--DESHPEMPNIEAMLDEVSQRA 746
Score = 218 bits (556), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 140/517 (27%), Positives = 255/517 (49%), Gaps = 43/517 (8%)
Query: 113 FLQNLMIRGLSNCGLHADLLHVYIKCRLSGCPSDDFTFPFLIKACSSLSDLRIGREIHCV 172
F+ N +IRG ++ GL + + ++++ SG D +TFPF + AC+ G +IH +
Sbjct: 100 FMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGL 159
Query: 173 IFRTGYHQNLVIQTALVDFYAKKGEMLTARLLFDQIPLADLVSCNTLMAGYSFNGLDQEA 232
I + GY ++L +Q +LV FYA+ GE+ +AR +FD++ ++VS +++ GY+ ++A
Sbjct: 160 IVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDA 219
Query: 233 LET-FRRILTVGLKPNVSTFSSVIPVCTRLGHFCFGKSLHGFTIKSGYLFDDFLVPALIS 291
++ FR + + PN T VI C +L G+ ++ F SG +D +V AL+
Sbjct: 220 VDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVD 279
Query: 292 MYAGDLDLSTARKLFDSLLEKNASVWNAMISAYTQSKKFFEAFEIFRQMIRAEMQPDLVT 351
MY + A++LFD N + NAM S Y + EA +F M+ + ++PD ++
Sbjct: 280 MYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRIS 339
Query: 352 FVSIIPSCENYCSFQCGESLTACVIKNGLGNQPSVLTALLSMYAKL-------------- 397
+S I SC + G+S V++NG + ++ AL+ MY K
Sbjct: 340 MLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMS 399
Query: 398 -----------------GNIDSAKFLFDQIPNRNLLCWNAMMSAYVRNRFWDASLAVFRQ 440
G +D+A F+ +P +N++ WN ++S V+ ++ ++ VF
Sbjct: 400 NKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCS 459
Query: 441 MQF-AGLNPDAVSIISVLSGCSKLDDVLLGKSAHAFSLRKGIVSNLDVLNALLMFYSDGG 499
MQ G+N D V+++S+ S C L + L K + + + GI ++ + L+ +S G
Sbjct: 460 MQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCG 519
Query: 500 QFSYAFTLFHRMSTRSSVSWNTLISRCVQNGAVEEAVILLQRMQKEGVELDMVTLISFLP 559
A ++F+ ++ R +W I G E A+ L M ++G++ D V + L
Sbjct: 520 DPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALT 579
Query: 560 NLNKNGNIKQG-------MVIHGYA---IKTGCVADV 586
+ G ++QG + +HG + + GC+ D+
Sbjct: 580 ACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDL 616
Score = 167 bits (423), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 126/461 (27%), Positives = 213/461 (46%), Gaps = 35/461 (7%)
Query: 118 MIRGLSNCGLHADLLHVYIK-CRLSGCPSDDFTFPFLIKACSSLSDLRIGREIHCVIFRT 176
MI G + D + ++ + R + T +I AC+ L DL G +++ I +
Sbjct: 206 MICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNS 265
Query: 177 GYHQNLVIQTALVDFYAKKGEMLTARLLFDQIPLADLVSCNTLMAGYSFNGLDQEALETF 236
G N ++ +ALVD Y K + A+ LFD+ ++L CN + + Y GL +EAL F
Sbjct: 266 GIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVF 325
Query: 237 RRILTVGLKPNVSTFSSVIPVCTRLGHFCFGKSLHGFTIKSGYLFDDFLVPALISMY--- 293
++ G++P+ + S I C++L + +GKS HG+ +++G+ D + ALI MY
Sbjct: 326 NLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKC 385
Query: 294 -------------------------AG---DLDLSTARKLFDSLLEKNASVWNAMISAYT 325
AG + ++ A + F+++ EKN WN +IS
Sbjct: 386 HRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLV 445
Query: 326 QSKKFFEAFEIFRQMIRAE-MQPDLVTFVSIIPSCENYCSFQCGESLTACVIKNGLGNQP 384
Q F EA E+F M E + D VT +SI +C + + + + + KNG+
Sbjct: 446 QGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDV 505
Query: 385 SVLTALLSMYAKLGNIDSAKFLFDQIPNRNLLCWNAMMSAYVRNRFWDASLAVFRQMQFA 444
+ T L+ M+++ G+ +SA +F+ + NR++ W A + A + ++ +F M
Sbjct: 506 RLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQ 565
Query: 445 GLNPDAVSIISVLSGCSKLDDVLLGKSAHAFSLRKGIVSNLDV-LNALLMFYSDGGQFSY 503
GL PD V+ + L+ CS V GK L+ VS DV ++ G
Sbjct: 566 GLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEE 625
Query: 504 AFTLFHRMSTR-SSVSWNTLISRCVQNGAVEEAVILLQRMQ 543
A L M + V WN+L++ C G VE A +++Q
Sbjct: 626 AVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQ 666
Score = 60.5 bits (145), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 50/227 (22%), Positives = 102/227 (44%), Gaps = 3/227 (1%)
Query: 100 ALSSFPIIKKPCVFLQNLMIRGLSNCGLHADLLHVYIKCR-LSGCPSDDFTFPFLIKACS 158
A +F + + + N +I GL L + + V+ + G +D T + AC
Sbjct: 422 AWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACG 481
Query: 159 SLSDLRIGREIHCVIFRTGYHQNLVIQTALVDFYAKKGEMLTARLLFDQIPLADLVSCNT 218
L L + + I+ I + G ++ + T LVD +++ G+ +A +F+ + D+ +
Sbjct: 482 HLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTA 541
Query: 219 LMAGYSFNGLDQEALETFRRILTVGLKPNVSTFSSVIPVCTRLGHFCFGKSLHGFTIK-S 277
+ + G + A+E F ++ GLKP+ F + C+ G GK + +K
Sbjct: 542 AIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLH 601
Query: 278 GYLFDDFLVPALISMYAGDLDLSTARKLFDSL-LEKNASVWNAMISA 323
G +D ++ + L A +L + + +E N +WN++++A
Sbjct: 602 GVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAA 648
>sp|P0C899|PP271_ARATH Putative pentatricopeptide repeat-containing protein At3g49142
OS=Arabidopsis thaliana GN=PCMP-H77 PE=3 SV=1
Length = 686
Score = 322 bits (826), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 178/539 (33%), Positives = 290/539 (53%), Gaps = 37/539 (6%)
Query: 360 ENYCSFQCGESLTACVIKNGLGNQPSVLTALLSMYAKLGNIDSAKFLFDQIPNRNLLCWN 419
+ Y + ++ + +I L S+ L+ YA L ++ SA+ +FD+IP RN++ N
Sbjct: 50 DTYPDIRTLRTVHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDEIPERNVIIIN 109
Query: 420 AMMSAYVRNRFWDASLAVFRQMQFAGLNPDAVSIISVLSGCSKLDDVLLGKSAHAFSLRK 479
M+ +YV N F+ + VF M + PD + VL CS +++G+ H + +
Sbjct: 110 VMIRSYVNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKV 169
Query: 480 GIVSNLDVLNALLMFYSDGGQFSYAFTLFHRMSTRSSVSWNTLISRCVQNGAVEEAVILL 539
G+ S L V N L+ Y G S A + MS R VSWN+L+ QN ++A+ +
Sbjct: 170 GLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVC 229
Query: 540 QRMQKEGVELDMVTLISFLPNLNKNGNIKQGMVIHGYAIKTGCVADVTFLNALITMYCNC 599
+ M+ + D T+ S LP A+ +V ++ +
Sbjct: 230 REMESVKISHDAGTMASLLP-----------------AVSNTTTENVMYVKDM------- 265
Query: 600 GSTNDGRLCLLLFQMGDKREISLWNAIISVYVQTNKAKQAVAFFTELLGAGLEPDNVTVL 659
F+MG K +S WN +I VY++ +AV ++ + G EPD V++
Sbjct: 266 -----------FFKMGKKSLVS-WNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSIT 313
Query: 660 SIISAGVLINSLNLTHSLMAFVIRKGLDKHVAVSNALMDSYVRCGNISMARKLFGSLIYK 719
S++ A ++L+L + ++ RK L ++ + NAL+D Y +CG + AR +F ++ +
Sbjct: 314 SVLPACGDTSALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSR 373
Query: 720 DAFSWSVMINGYGLYGDGEAALELFKQMQLSGVRPNEITYLGVLSACSHAGLVEQSKMVF 779
D SW+ MI+ YG G G A+ LF ++Q SG+ P+ I ++ L+ACSHAGL+E+ + F
Sbjct: 374 DVVSWTAMISAYGFSGRGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCF 433
Query: 780 KSMVEH-GISQKMEHYACMVDLLGRTGHLNEAFIFVKKLPCKPSVSILESLLGACRIHGN 838
K M +H I+ ++EH ACMVDLLGR G + EA+ F++ + +P+ + +LLGACR+H +
Sbjct: 434 KLMTDHYKITPRLEHLACMVDLLGRAGKVKEAYRFIQDMSMEPNERVWGALLGACRVHSD 493
Query: 839 VELGEIISGMLFEMDPENPGSYVMLHNIYASAGRWEDAYRVRSCMKRSRLKKVPGFSLV 897
++G + + LF++ PE G YV+L NIYA AGRWE+ +R+ MK LKK PG S V
Sbjct: 494 TDIGLLAADKLFQLAPEQSGYYVLLSNIYAKAGRWEEVTNIRNIMKSKGLKKNPGASNV 552
Score = 180 bits (456), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 112/396 (28%), Positives = 191/396 (48%), Gaps = 41/396 (10%)
Query: 274 TIKSGYLFDDF-----LVPALISMYAGDLDLSTARKLFDSLLEKNASVWNAMISAYTQSK 328
T+ S + +D L L+ YA D+++ARK+FD + E+N + N MI +Y +
Sbjct: 60 TVHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNNG 119
Query: 329 KFFEAFEIFRQMIRAEMQPDLVTFVSIIPSCENYCSFQCGESLTACVIKNGLGNQPSVLT 388
+ E ++F M ++PD TF ++ +C + G + K GL + V
Sbjct: 120 FYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGN 179
Query: 389 ALLSMYAKLGNIDSAKFLFDQIPNRNLLCWNAMMSAYVRNRFWDASLAVFRQMQFAGLNP 448
L+SMY K G + A+ + D++ R+++ WN+++ Y +N+ +D +L V R+M+ ++
Sbjct: 180 GLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKISH 239
Query: 449 DAVSIISVLSGCSKLDDVLLGKSAHAFSLRKGIVSNLDVLNALLMFYSDGGQFSYAFTLF 508
DA ++ S+L VSN N + Y +F
Sbjct: 240 DAGTMASLLPA----------------------VSNTTTENVM-----------YVKDMF 266
Query: 509 HRMSTRSSVSWNTLISRCVQNGAVEEAVILLQRMQKEGVELDMVTLISFLPNLNKNGNIK 568
+M +S VSWN +I ++N EAV L RM+ +G E D V++ S LP +
Sbjct: 267 FKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALS 326
Query: 569 QGMVIHGYAIKTGCVADVTFLNALITMYCNCGSTNDGRLCLLLFQMGDKREISLWNAIIS 628
G IHGY + + ++ NALI MY CG R +F+ R++ W A+IS
Sbjct: 327 LGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKAR---DVFENMKSRDVVSWTAMIS 383
Query: 629 VYVQTNKAKQAVAFFTELLGAGLEPDNVTVLSIISA 664
Y + + AVA F++L +GL PD++ ++ ++A
Sbjct: 384 AYGFSGRGCDAVALFSKLQDSGLVPDSIAFVTTLAA 419
Score = 177 bits (450), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 111/422 (26%), Positives = 196/422 (46%), Gaps = 33/422 (7%)
Query: 149 TFPFLIKACSSLSDLRIGREIHCVIFRTGYHQNLVIQTALVDFYAKKGEMLTARLLFDQI 208
T L + + D+R R +H I N + L+ YA ++ +AR +FD+I
Sbjct: 41 TVFLLGQVLDTYPDIRTLRTVHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDEI 100
Query: 209 PLADLVSCNTLMAGYSFNGLDQEALETFRRILTVGLKPNVSTFSSVIPVCTRLGHFCFGK 268
P +++ N ++ Y NG E ++ F + ++P+ TF V+ C+ G G+
Sbjct: 101 PERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGR 160
Query: 269 SLHGFTIKSGYLFDDFLVPALISMYAGDLDLSTARKLFDSLLEKNASVWNAMISAYTQSK 328
+HG K G F+ L+SMY LS AR + D + ++ WN+++ Y Q++
Sbjct: 161 KIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQ 220
Query: 329 KFFEAFEIFRQMIRAEMQPDLVTFVSIIPSCENYCSFQCGESLTACVIKNGLGNQPSVLT 388
+F +A E+ R+M ++ D T S++P+ N +
Sbjct: 221 RFDDALEVCREMESVKISHDAGTMASLLPAVSNTTT------------------------ 256
Query: 389 ALLSMYAKLGNIDSAKFLFDQIPNRNLLCWNAMMSAYVRNRFWDASLAVFRQMQFAGLNP 448
N+ K +F ++ ++L+ WN M+ Y++N ++ ++ +M+ G P
Sbjct: 257 ---------ENVMYVKDMFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEP 307
Query: 449 DAVSIISVLSGCSKLDDVLLGKSAHAFSLRKGIVSNLDVLNALLMFYSDGGQFSYAFTLF 508
DAVSI SVL C + LGK H + RK ++ NL + NAL+ Y+ G A +F
Sbjct: 308 DAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVF 367
Query: 509 HRMSTRSSVSWNTLISRCVQNGAVEEAVILLQRMQKEGVELDMVTLISFLPNLNKNGNIK 568
M +R VSW +IS +G +AV L ++Q G+ D + ++ L + G ++
Sbjct: 368 ENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLE 427
Query: 569 QG 570
+G
Sbjct: 428 EG 429
Score = 164 bits (414), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 119/434 (27%), Positives = 206/434 (47%), Gaps = 45/434 (10%)
Query: 100 ALSSFPIIKKPCVFLQNLMIRGLSNCGLHADLLHVYIKCRLSGC--PSDDFTFPFLIKAC 157
A F I + V + N+MIR N G + + + V+ + GC D +TFP ++KAC
Sbjct: 93 ARKVFDEIPERNVIIINVMIRSYVNNGFYGEGVKVF--GTMCGCNVRPDHYTFPCVLKAC 150
Query: 158 SSLSDLRIGREIHCVIFRTGYHQNLVIQTALVDFYAKKGEMLTARLLFDQIPLADLVSCN 217
S + IGR+IH + G L + LV Y K G + ARL+ D++ D+VS N
Sbjct: 151 SCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWN 210
Query: 218 TLMAGYSFNGLDQEALETFRRILTVGLKPNVSTFSSVIPVCTRLGHFCFGKSLHGFTIKS 277
+L+ GY+ N +ALE R + +V + + T +S++P ++ T ++
Sbjct: 211 SLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLP------------AVSNTTTEN 258
Query: 278 GYLFDDFLVPALISMYAGDLDLSTARKLFDSLLEKNASVWNAMISAYTQSKKFFEAFEIF 337
MY D +F + +K+ WN MI Y ++ EA E++
Sbjct: 259 -------------VMYVKD--------MFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELY 297
Query: 338 RQMIRAEMQPDLVTFVSIIPSCENYCSFQCGESLTACVIKNGLGNQPSVLTALLSMYAKL 397
+M +PD V+ S++P+C + + G+ + + + L + AL+ MYAK
Sbjct: 298 SRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLENALIDMYAKC 357
Query: 398 GNIDSAKFLFDQIPNRNLLCWNAMMSAY-VRNRFWDASLAVFRQMQFAGLNPDAVSIISV 456
G ++ A+ +F+ + +R+++ W AM+SAY R DA +A+F ++Q +GL PD+++ ++
Sbjct: 358 GCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDA-VALFSKLQDSGLVPDSIAFVTT 416
Query: 457 LSGCSKLDDVLLGKSAHAFSLRKG---IVSNLDVLNALLMFYSDGGQFSYAFTLFHRMST 513
L+ CS LL + F L I L+ L ++ G+ A+ MS
Sbjct: 417 LAACSHAG--LLEEGRSCFKLMTDHYKITPRLEHLACMVDLLGRAGKVKEAYRFIQDMSM 474
Query: 514 RSSVS-WNTLISRC 526
+ W L+ C
Sbjct: 475 EPNERVWGALLGAC 488
Score = 80.9 bits (198), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 66/260 (25%), Positives = 115/260 (44%), Gaps = 19/260 (7%)
Query: 72 HNKNLKALPLPALALRTLEAFEITSYHIALSSFPIIKKPCVFLQNLMIRGLSNCGLHADL 131
H+ A LPA++ T E ++ F + KK V N+MI + +
Sbjct: 239 HDAGTMASLLPAVSNTTTE----NVMYVKDMFFKMGKKSLVSW-NVMIGVYMKNAMPVEA 293
Query: 132 LHVYIKCRLSGCPSDDFTFPFLIKACSSLSDLRIGREIHCVIFRTGYHQNLVIQTALVDF 191
+ +Y + G D + ++ AC S L +G++IH I R NL+++ AL+D
Sbjct: 294 VELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLENALIDM 353
Query: 192 YAKKGEMLTARLLFDQIPLADLVSCNTLMAGYSFNGLDQEALETFRRILTVGLKPNVSTF 251
YAK G + AR +F+ + D+VS +++ Y F+G +A+ F ++ GL P+ F
Sbjct: 354 YAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQDSGLVPDSIAF 413
Query: 252 SSVIPVCTRLGHFCFGKSLHGFTIKSGYLFDDFLVPALISMYAGDLDL--------STAR 303
+ + C+ G G+S + D + + + A +DL R
Sbjct: 414 VTTLAACSHAGLLEEGRSCFKL------MTDHYKITPRLEHLACMVDLLGRAGKVKEAYR 467
Query: 304 KLFDSLLEKNASVWNAMISA 323
+ D +E N VW A++ A
Sbjct: 468 FIQDMSMEPNERVWGALLGA 487
>sp|Q9SMZ2|PP347_ARATH Pentatricopeptide repeat-containing protein At4g33170
OS=Arabidopsis thaliana GN=PCMP-H53 PE=3 SV=1
Length = 990
Score = 320 bits (819), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 206/751 (27%), Positives = 369/751 (49%), Gaps = 38/751 (5%)
Query: 149 TFPFLIKACSSLSDLRIGREIHCVIFRTGYHQNLVIQTALVDFYAKKGEMLTARLLFDQI 208
T ++K C + H + G + + ALV+ Y K G++ ++LF+++
Sbjct: 147 TLSPMLKLCLHSGYVWASESFHGYACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEM 206
Query: 209 PLADLVSCNTLMAGYSFNGLDQEALETFRRILTVGLKPNVSTFSSVIPVCTRLGHFCFGK 268
P D+V N ++ Y G +EA++ + GL PN T RL G
Sbjct: 207 PYRDVVLWNLMLKAYLEMGFKEEAIDLSSAFHSSGLNPNEITL--------RLLARISGD 258
Query: 269 SLHGFTIKSGYLFDDFLVPALISMYAGDLDLSTARKLFDSLLEKNASVWNAMISAYTQSK 328
+KS +A D S+ ++ N +S Y S
Sbjct: 259 DSDAGQVKS---------------FANGNDASSVSEII---------FRNKGLSEYLHSG 294
Query: 329 KFFEAFEIFRQMIRAEMQPDLVTFVSIIPSCENYCSFQCGESLTACVIKNGLGNQPSVLT 388
++ + F M+ ++++ D VTF+ ++ + S G+ + +K GL +V
Sbjct: 295 QYSALLKCFADMVESDVECDQVTFILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVSN 354
Query: 389 ALLSMYAKLGNIDSAKFLFDQIPNRNLLCWNAMMSAYVRNRFWDASLAVFRQMQFAGLNP 448
+L++MY KL A+ +FD + R+L+ WN++++ +N ++ +F Q+ GL P
Sbjct: 355 SLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKP 414
Query: 449 DAVSIISVLSGCSKLDDVL-LGKSAHAFSLRKGIVSNLDVLNALLMFYSDGGQFSYAFTL 507
D ++ SVL S L + L L K H +++ VS+ V AL+ YS A L
Sbjct: 415 DQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAEIL 474
Query: 508 FHRMSTRSSVSWNTLISRCVQNGAVEEAVILLQRMQKEGVELDMVTLISFLPNLNKNGNI 567
F R + V+WN +++ Q+ + + L M K+G D TL + I
Sbjct: 475 FERHNF-DLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAI 533
Query: 568 KQGMVIHGYAIKTGCVADVTFLNALITMYCNCGSTNDGRLCLLLFQMGDKREISLWNAII 627
QG +H YAIK+G D+ + ++ MY CG + + + D W +I
Sbjct: 534 NQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDD---VAWTTMI 590
Query: 628 SVYVQTNKAKQAVAFFTELLGAGLEPDNVTVLSIISAGVLINSLNLTHSLMAFVIRKGLD 687
S ++ + ++A F+++ G+ PD T+ ++ A + +L + A ++
Sbjct: 591 SGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCT 650
Query: 688 KHVAVSNALMDSYVRCGNISMARKLFGSLIYKDAFSWSVMINGYGLYGDGEAALELFKQM 747
V +L+D Y +CG+I A LF + + +W+ M+ G +G+G+ L+LFKQM
Sbjct: 651 NDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKETLQLFKQM 710
Query: 748 QLSGVRPNEITYLGVLSACSHAGLVEQSKMVFKSMV-EHGISQKMEHYACMVDLLGRTGH 806
+ G++P+++T++GVLSACSH+GLV ++ +SM ++GI ++EHY+C+ D LGR G
Sbjct: 711 KSLGIKPDKVTFIGVLSACSHSGLVSEAYKHMRSMHGDYGIKPEIEHYSCLADALGRAGL 770
Query: 807 LNEAFIFVKKLPCKPSVSILESLLGACRIHGNVELGEIISGMLFEMDPENPGSYVMLHNI 866
+ +A ++ + + S S+ +LL ACR+ G+ E G+ ++ L E++P + +YV+L N+
Sbjct: 771 VKQAENLIESMSMEASASMYRTLLAACRVQGDTETGKRVATKLLELEPLDSSAYVLLSNM 830
Query: 867 YASAGRWEDAYRVRSCMKRSRLKKVPGFSLV 897
YA+A +W++ R+ MK ++KK PGFS +
Sbjct: 831 YAAASKWDEMKLARTMMKGHKVKKDPGFSWI 861
Score = 223 bits (568), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 172/678 (25%), Positives = 320/678 (47%), Gaps = 51/678 (7%)
Query: 150 FPFLIKACSSLSDLRIGREIHCVIFRTGYHQNLVIQTALVDFYAKKGEMLTARLLFDQIP 209
F FL A +S SDL +G+ H I + + L+ Y+K G + AR +FD++P
Sbjct: 43 FGFLRNAITS-SDLMLGKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMP 101
Query: 210 LADLVSCNTLMAGYSFNGL-----DQEALETFRRILTVGLKPNVSTFSSVIPVCTRLGHF 264
DLVS N+++A Y+ + Q+A FR + + + T S ++ +C G+
Sbjct: 102 DRDLVSWNSILAAYAQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYV 161
Query: 265 CFGKSLHGFTIKSGYLFDDFLVPALISMYAGDLDLSTARKLFDSLLEKNASVWNAMISAY 324
+S HG+ K G D+F+ AL+++Y + + LF+ + ++ +WN M+ AY
Sbjct: 162 WASESFHGYACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAY 221
Query: 325 TQSKKFFEAFEIFRQMIRAEMQPDLVTFVSIIPSCENYCSFQCGESLTACVIKN-GLGNQ 383
+ EA ++ + + P+ +T + G+ A +K+ GN
Sbjct: 222 LEMGFKEEAIDLSSAFHSSGLNPNEITL--------RLLARISGDDSDAGQVKSFANGND 273
Query: 384 PSVLTALLSMYAKLGNIDSAKFLFDQIPNRNLLCWNAMMSAYVRNRFWDASLAVFRQMQF 443
S ++ ++ N +S Y+ + + A L F M
Sbjct: 274 ASSVSEIIFR-------------------------NKGLSEYLHSGQYSALLKCFADMVE 308
Query: 444 AGLNPDAVSIISVLSGCSKLDDVLLGKSAHAFSLRKGIVSNLDVLNALLMFYSDGGQFSY 503
+ + D V+ I +L+ K+D + LG+ H +L+ G+ L V N+L+ Y +F +
Sbjct: 309 SDVECDQVTFILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGF 368
Query: 504 AFTLFHRMSTRSSVSWNTLISRCVQNGAVEEAVILLQRMQKEGVELDMVTLISFLPNLNK 563
A T+F MS R +SWN++I+ QNG EAV L ++ + G++ D T+ S L
Sbjct: 369 ARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSV---LKA 425
Query: 564 NGNIKQGMV----IHGYAIKTGCVADVTFLNALITMYCNCGSTNDGRLCLLLFQMGDKRE 619
++ +G+ +H +AIK V+D ALI Y + +LF+ + +
Sbjct: 426 ASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAE---ILFERHN-FD 481
Query: 620 ISLWNAIISVYVQTNKAKQAVAFFTELLGAGLEPDNVTVLSIISAGVLINSLNLTHSLMA 679
+ WNA+++ Y Q++ + + F + G D+ T+ ++ + ++N + A
Sbjct: 482 LVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHA 541
Query: 680 FVIRKGLDKHVAVSNALMDSYVRCGNISMARKLFGSLIYKDAFSWSVMINGYGLYGDGEA 739
+ I+ G D + VS+ ++D YV+CG++S A+ F S+ D +W+ MI+G G+ E
Sbjct: 542 YAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIENGEEER 601
Query: 740 ALELFKQMQLSGVRPNEITYLGVLSACSHAGLVEQSKMVFKSMVEHGISQKMEHYACMVD 799
A +F QM+L GV P+E T + A S +EQ + + + ++ + +VD
Sbjct: 602 AFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTNDPFVGTSLVD 661
Query: 800 LLGRTGHLNEAFIFVKKL 817
+ + G +++A+ K++
Sbjct: 662 MYAKCGSIDDAYCLFKRI 679
Score = 202 bits (513), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 136/480 (28%), Positives = 237/480 (49%), Gaps = 15/480 (3%)
Query: 120 RGLS---NCGLHADLLHVYIKCRLSGCPSDDFTFPFLIKACSSLSDLRIGREIHCVIFRT 176
+GLS + G ++ LL + S D TF ++ + L +G+++HC+ +
Sbjct: 285 KGLSEYLHSGQYSALLKCFADMVESDVECDQVTFILMLATAVKVDSLALGQQVHCMALKL 344
Query: 177 GYHQNLVIQTALVDFYAKKGEMLTARLLFDQIPLADLVSCNTLMAGYSFNGLDQEALETF 236
G L + +L++ Y K + AR +FD + DL+S N+++AG + NGL+ EA+ F
Sbjct: 345 GLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLF 404
Query: 237 RRILTVGLKPNVSTFSSVIPVCTRLGH-FCFGKSLHGFTIKSGYLFDDFLVPALISMYAG 295
++L GLKP+ T +SV+ + L K +H IK + D F+ ALI Y+
Sbjct: 405 MQLLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSR 464
Query: 296 DLDLSTARKLFDSLLEKNASVWNAMISAYTQSKKFFEAFEIFRQMIRAEMQPDLVTFVSI 355
+ + A LF+ + WNAM++ YTQS + ++F M + + D T ++
Sbjct: 465 NRCMKEAEILFERH-NFDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATV 523
Query: 356 IPSCENYCSFQCGESLTACVIKNGLGNQPSVLTALLSMYAKLGNIDSAKFLFDQIPNRNL 415
+C + G+ + A IK+G V + +L MY K G++ +A+F FD IP +
Sbjct: 524 FKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDD 583
Query: 416 LCWNAMMSAYVRNRFWDASLAVFRQMQFAGLNPDAVSIISVLSGCSKLDDVLLGKSAHAF 475
+ W M+S + N + + VF QM+ G+ PD +I ++ S L + G+ HA
Sbjct: 584 VAWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHAN 643
Query: 476 SLRKGIVSNLDVLNALLMFYSDGGQFSYAFTLFHRMSTRSSVSWNTLISRCVQNGAVEEA 535
+L+ ++ V +L+ Y+ G A+ LF R+ + +WN ++ Q+G +E
Sbjct: 644 ALKLNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKET 703
Query: 536 VILLQRMQKEGVELDMVTLISFLPNLNKNGNI----KQGMVIHG-YAIKT-----GCVAD 585
+ L ++M+ G++ D VT I L + +G + K +HG Y IK C+AD
Sbjct: 704 LQLFKQMKSLGIKPDKVTFIGVLSACSHSGLVSEAYKHMRSMHGDYGIKPEIEHYSCLAD 763
Score = 176 bits (446), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 149/584 (25%), Positives = 259/584 (44%), Gaps = 49/584 (8%)
Query: 266 FGKSLHGFTIKSGYLFDDFLVPALISMYAGDLDLSTARKLFDSLLEKNASVWNAMISAYT 325
GK H + + FL+ LISMY+ L+ AR++FD + +++ WN++++AY
Sbjct: 57 LGKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAAYA 116
Query: 326 QS-----KKFFEAFEIFRQMIRAEMQPDLVTFVSIIPSCENYCSFQCGESLTACVIKNGL 380
QS + +AF +FR + + + +T ++ C + ES K GL
Sbjct: 117 QSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYACKIGL 176
Query: 381 GNQPSVLTALLSMYAKLGNIDSAKFLFDQIPNRNLLCWNAMMSAYVRNRFWDASLAVFRQ 440
V AL+++Y K G + K LF+++P R+++ WN M+ AY+ F + ++ +
Sbjct: 177 DGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSA 236
Query: 441 MQFAGLNPDAVS--IISVLSGCSKLDDVLLGKSAHAFSLRKGIVSNLDVLNALLMFYSDG 498
+GLNP+ ++ +++ +SG DD SD
Sbjct: 237 FHSSGLNPNEITLRLLARISG----DD------------------------------SDA 262
Query: 499 GQFSYAFTLFHRMSTRSSVSW-NTLISRCVQNGAVEEAVILLQRMQKEGVELDMVTLISF 557
GQ +F + S+ S + + N +S + +G + M + VE D VT I
Sbjct: 263 GQVK-SFANGNDASSVSEIIFRNKGLSEYLHSGQYSALLKCFADMVESDVECDQVTFILM 321
Query: 558 LPNLNKNGNIKQGMVIHGYAIKTGCVADVTFLNALITMYCNCGSTNDGRLCLLLFQMGDK 617
L K ++ G +H A+K G +T N+LI MYC R +F +
Sbjct: 322 LATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFAR---TVFDNMSE 378
Query: 618 REISLWNAIISVYVQTNKAKQAVAFFTELLGAGLEPDNVTVLSII-SAGVLINSLNLTHS 676
R++ WN++I+ Q +AV F +LL GL+PD T+ S++ +A L L+L+
Sbjct: 379 RDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQ 438
Query: 677 LMAFVIRKGLDKHVAVSNALMDSYVRCGNISMARKLFGSLIYKDAFSWSVMINGYGLYGD 736
+ I+ VS AL+D+Y R + A LF + D +W+ M+ GY D
Sbjct: 439 VHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAEILFERHNF-DLVAWNAMMAGYTQSHD 497
Query: 737 GEAALELFKQMQLSGVRPNEITYLGVLSACSHAGLVEQSKMVFKSMVEHGISQKMEHYAC 796
G L+LF M G R ++ T V C + Q K V ++ G + +
Sbjct: 498 GHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSG 557
Query: 797 MVDLLGRTGHLNEAFIFVKKLPCKPSVSILESLLGACRIHGNVE 840
++D+ + G ++ A +P V+ +++ C +G E
Sbjct: 558 ILDMYVKCGDMSAAQFAFDSIPVPDDVA-WTTMISGCIENGEEE 600
Score = 176 bits (446), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 123/422 (29%), Positives = 206/422 (48%), Gaps = 6/422 (1%)
Query: 116 NLMIRGLSNCGLHADLLHVYIKCRLSGCPSDDFTFPFLIKACSSLSD-LRIGREIHCVIF 174
N +I G++ GL + + ++++ G D +T ++KA SSL + L + +++H
Sbjct: 385 NSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAI 444
Query: 175 RTGYHQNLVIQTALVDFYAKKGEMLTARLLFDQIPLADLVSCNTLMAGYSFNGLDQEALE 234
+ + + TAL+D Y++ M A +LF++ DLV+ N +MAGY+ + + L+
Sbjct: 445 KINNVSDSFVSTALIDAYSRNRCMKEAEILFERHNF-DLVAWNAMMAGYTQSHDGHKTLK 503
Query: 235 TFRRILTVGLKPNVSTFSSVIPVCTRLGHFCFGKSLHGFTIKSGYLFDDFLVPALISMYA 294
F + G + + T ++V C L GK +H + IKSGY D ++ ++ MY
Sbjct: 504 LFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYV 563
Query: 295 GDLDLSTARKLFDSLLEKNASVWNAMISAYTQSKKFFEAFEIFRQMIRAEMQPDLVTFVS 354
D+S A+ FDS+ + W MIS ++ + AF +F QM + PD T +
Sbjct: 564 KCGDMSAAQFAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIAT 623
Query: 355 IIPSCENYCSFQCGESLTACVIKNGLGNQPSVLTALLSMYAKLGNIDSAKFLFDQIPNRN 414
+ + + + G + A +K N P V T+L+ MYAK G+ID A LF +I N
Sbjct: 624 LAKASSCLTALEQGRQIHANALKLNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMN 683
Query: 415 LLCWNAMMSAYVRNRFWDASLAVFRQMQFAGLNPDAVSIISVLSGCSKLDDVLLGKSAHA 474
+ WNAM+ ++ +L +F+QM+ G+ PD V+ I VLS CS ++ H
Sbjct: 684 ITAWNAMLVGLAQHGEGKETLQLFKQMKSLGIKPDKVTFIGVLSACSH-SGLVSEAYKHM 742
Query: 475 FSLRK--GIVSNLDVLNALLMFYSDGGQFSYAFTLFHRMSTRSSVS-WNTLISRCVQNGA 531
S+ GI ++ + L G A L MS +S S + TL++ C G
Sbjct: 743 RSMHGDYGIKPEIEHYSCLADALGRAGLVKQAENLIESMSMEASASMYRTLLAACRVQGD 802
Query: 532 VE 533
E
Sbjct: 803 TE 804
Score = 93.2 bits (230), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 66/243 (27%), Positives = 117/243 (48%), Gaps = 25/243 (10%)
Query: 93 EITSYHIALSSFPIIKKPCVFLQNLMIRGLSNCGLHADLLHVYIKCRLSGCPSDDFTFPF 152
++++ A S P+ P MI G G HV+ + RL G D+FT
Sbjct: 567 DMSAAQFAFDSIPV---PDDVAWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIAT 623
Query: 153 LIKACSSLSDLRIGREIHCVIFRTGYHQNLVIQTALVDFYAKKGEMLTARLLFDQIPLAD 212
L KA S L+ L GR+IH + + + T+LVD YAK G + A LF +I + +
Sbjct: 624 LAKASSCLTALEQGRQIHANALKLNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMN 683
Query: 213 LVSCNTLMAGYSFNGLDQEALETFRRILTVGLKPNVSTFSSVIPVCTRLG----HFCFGK 268
+ + N ++ G + +G +E L+ F+++ ++G+KP+ TF V+ C+ G + +
Sbjct: 684 ITAWNAMLVGLAQHGEGKETLQLFKQMKSLGIKPDKVTFIGVLSACSHSGLVSEAYKHMR 743
Query: 269 SLHGFTIKSGYLFDDFLVPALISMYAGDLD-------LSTARKLFDSL-LEKNASVWNAM 320
S+HG D+ + I Y+ D + A L +S+ +E +AS++ +
Sbjct: 744 SMHG----------DYGIKPEIEHYSCLADALGRAGLVKQAENLIESMSMEASASMYRTL 793
Query: 321 ISA 323
++A
Sbjct: 794 LAA 796
>sp|Q9C9I6|PP116_ARATH Pentatricopeptide repeat-containing protein At1g71490
OS=Arabidopsis thaliana GN=PCMP-E67 PE=2 SV=1
Length = 681
Score = 319 bits (818), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 192/606 (31%), Positives = 313/606 (51%), Gaps = 42/606 (6%)
Query: 331 FEAFEIFRQMIRAEMQPDLV--TFVSIIPSCENYCSFQCGESLTACVIKNGLGNQPSVLT 388
F+ F + R + + DLV + S++ +C + +F G + A I +G+ ++
Sbjct: 23 FKTFSLLRLQSSSAVSDDLVLHSAASLLSACVDVRAFLAGVQVHAHCISSGVEYHSVLVP 82
Query: 389 ALLSMYAKLGNIDSAKFLFDQIPNRNLLCWNAMMSAYVRNRFWDASLAVFRQMQFAGLNP 448
L++ Y+ + A+ + + + L WN ++++Y +N ++ +A +++M G+ P
Sbjct: 83 KLVTFYSAFNLHNEAQSIIENSDILHPLPWNVLIASYAKNELFEEVIAAYKRMVSKGIRP 142
Query: 449 DAVSIISVLSGCSKLDDVLLGKSAHAFSLRKGIVSNLDVLNALLMFYSDGGQFSYAFTLF 508
DA + SVL C + DV G+ H S+L V NAL+ Y A LF
Sbjct: 143 DAFTYPSVLKACGETLDVAFGRVVHGSIEVSSYKSSLYVCNALISMYKRFRNMGIARRLF 202
Query: 509 HRMSTRSSVSWNTLISRCVQNGAVEEAVILLQRMQKEGVELDMVT--------------- 553
RM R +VSWN +I+ G EA L +M GVE+ ++T
Sbjct: 203 DRMFERDAVSWNAVINCYASEGMWSEAFELFDKMWFSGVEVSVITWNIISGGCLQTGNYV 262
Query: 554 ----LISFLPNLNKN----------------GNIKQGMVIHGYAIKTGCVADVTFLNALI 593
LIS + N + G I+ G IHG AI + N LI
Sbjct: 263 GALGLISRMRNFPTSLDPVAMIIGLKACSLIGAIRLGKEIHGLAIHSSYDGIDNVRNTLI 322
Query: 594 TMYCNCGSTNDGRLCLLLFQMGDKREISLWNAIISVYVQTNKAKQAVAFFTELLGAGLEP 653
TMY C D R L++F+ ++ + WN+IIS Y Q NK+++A E+L AG +P
Sbjct: 323 TMYSKC---KDLRHALIVFRQTEENSLCTWNSIISGYAQLNKSEEASHLLREMLVAGFQP 379
Query: 654 DNVTVLSIISAGVLINSLNLTHSLMAFVIR-KGLDKHVAVSNALMDSYVRCGNISMARKL 712
+++T+ SI+ I +L +++R K + + N+L+D Y + G I A+++
Sbjct: 380 NSITLASILPLCARIANLQHGKEFHCYILRRKCFKDYTMLWNSLVDVYAKSGKIVAAKQV 439
Query: 713 FGSLIYKDAFSWSVMINGYGLYGDGEAALELFKQMQLSGVRPNEITYLGVLSACSHAGLV 772
+ +D +++ +I+GYG G+G AL LFK+M SG++P+ +T + VLSACSH+ LV
Sbjct: 440 SDLMSKRDEVTYTSLIDGYGNQGEGGVALALFKEMTRSGIKPDHVTVVAVLSACSHSKLV 499
Query: 773 EQSKMVFKSM-VEHGISQKMEHYACMVDLLGRTGHLNEAFIFVKKLPCKPSVSILESLLG 831
+ + +F M E+GI ++H++CMVDL GR G L +A + +P KPS + +LL
Sbjct: 500 HEGERLFMKMQCEYGIRPCLQHFSCMVDLYGRAGFLAKAKDIIHNMPYKPSGATWATLLN 559
Query: 832 ACRIHGNVELGEIISGMLFEMDPENPGSYVMLHNIYASAGRWEDAYRVRSCMKRSRLKKV 891
AC IHGN ++G+ + L EM PENPG YV++ N+YA+AG W VR+ M+ +KK
Sbjct: 560 ACHIHGNTQIGKWAAEKLLEMKPENPGYYVLIANMYAAAGSWSKLAEVRTIMRDLGVKKD 619
Query: 892 PGFSLV 897
PG + +
Sbjct: 620 PGCAWI 625
Score = 171 bits (432), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 117/474 (24%), Positives = 223/474 (47%), Gaps = 39/474 (8%)
Query: 136 IKCRLSGCPSDDFTF---PFLIKACSSLSDLRIGREIHCVIFRTGYHQNLVIQTALVDFY 192
++ + S SDD L+ AC + G ++H +G + V+ LV FY
Sbjct: 29 LRLQSSSAVSDDLVLHSAASLLSACVDVRAFLAGVQVHAHCISSGVEYHSVLVPKLVTFY 88
Query: 193 AKKGEMLTARLLFDQIPLADLVSCNTLMAGYSFNGLDQEALETFRRILTVGLKPNVSTFS 252
+ A+ + + + + N L+A Y+ N L +E + ++R+++ G++P+ T+
Sbjct: 89 SAFNLHNEAQSIIENSDILHPLPWNVLIASYAKNELFEEVIAAYKRMVSKGIRPDAFTYP 148
Query: 253 SVIPVCTRLGHFCFGKSLHGFTIKSGYLFDDFLVPALISMYAGDLDLSTARKLFDSLLEK 312
SV+ C FG+ +HG S Y ++ ALISMY ++ AR+LFD + E+
Sbjct: 149 SVLKACGETLDVAFGRVVHGSIEVSSYKSSLYVCNALISMYKRFRNMGIARRLFDRMFER 208
Query: 313 NASVWNAMISAYTQSKKFFEAFEIFRQMIRAEMQPDLVTFVSIIPSC---ENY------- 362
+A WNA+I+ Y + EAFE+F +M + ++ ++T+ I C NY
Sbjct: 209 DAVSWNAVINCYASEGMWSEAFELFDKMWFSGVEVSVITWNIISGGCLQTGNYVGALGLI 268
Query: 363 ---------------------CSF----QCGESLTACVIKNGLGNQPSVLTALLSMYAKL 397
CS + G+ + I + +V L++MY+K
Sbjct: 269 SRMRNFPTSLDPVAMIIGLKACSLIGAIRLGKEIHGLAIHSSYDGIDNVRNTLITMYSKC 328
Query: 398 GNIDSAKFLFDQIPNRNLLCWNAMMSAYVRNRFWDASLAVFRQMQFAGLNPDAVSIISVL 457
++ A +F Q +L WN+++S Y + + + + R+M AG P+++++ S+L
Sbjct: 329 KDLRHALIVFRQTEENSLCTWNSIISGYAQLNKSEEASHLLREMLVAGFQPNSITLASIL 388
Query: 458 SGCSKLDDVLLGKSAHAFSLRKGIVSNLDVL-NALLMFYSDGGQFSYAFTLFHRMSTRSS 516
C+++ ++ GK H + LR+ + +L N+L+ Y+ G+ A + MS R
Sbjct: 389 PLCARIANLQHGKEFHCYILRRKCFKDYTMLWNSLVDVYAKSGKIVAAKQVSDLMSKRDE 448
Query: 517 VSWNTLISRCVQNGAVEEAVILLQRMQKEGVELDMVTLISFLPNLNKNGNIKQG 570
V++ +LI G A+ L + M + G++ D VT+++ L + + + +G
Sbjct: 449 VTYTSLIDGYGNQGEGGVALALFKEMTRSGIKPDHVTVVAVLSACSHSKLVHEG 502
Score = 114 bits (284), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 67/276 (24%), Positives = 144/276 (52%), Gaps = 7/276 (2%)
Query: 154 IKACSSLSDLRIGREIHCVIFRTGYHQNLVIQTALVDFYAKKGEMLTARLLFDQIPLADL 213
+KACS + +R+G+EIH + + Y ++ L+ Y+K ++ A ++F Q L
Sbjct: 287 LKACSLIGAIRLGKEIHGLAIHSSYDGIDNVRNTLITMYSKCKDLRHALIVFRQTEENSL 346
Query: 214 VSCNTLMAGYSFNGLDQEALETFRRILTVGLKPNVSTFSSVIPVCTRLGHFCFGKSLHGF 273
+ N++++GY+ +EA R +L G +PN T +S++P+C R+ + GK H +
Sbjct: 347 CTWNSIISGYAQLNKSEEASHLLREMLVAGFQPNSITLASILPLCARIANLQHGKEFHCY 406
Query: 274 TIKSGYLFDDF--LVPALISMYAGDLDLSTARKLFDSLLEKNASVWNAMISAYTQSKKFF 331
++ F D+ L +L+ +YA + A+++ D + +++ + ++I Y +
Sbjct: 407 ILRRK-CFKDYTMLWNSLVDVYAKSGKIVAAKQVSDLMSKRDEVTYTSLIDGYGNQGEGG 465
Query: 332 EAFEIFRQMIRAEMQPDLVTFVSIIPSCENYCSFQCGESLTACVIKNGLGNQPSV--LTA 389
A +F++M R+ ++PD VT V+++ +C + GE L ++ G +P + +
Sbjct: 466 VALALFKEMTRSGIKPDHVTVVAVLSACSHSKLVHEGERLFM-KMQCEYGIRPCLQHFSC 524
Query: 390 LLSMYAKLGNIDSAKFLFDQIPNR-NLLCWNAMMSA 424
++ +Y + G + AK + +P + + W +++A
Sbjct: 525 MVDLYGRAGFLAKAKDIIHNMPYKPSGATWATLLNA 560
>sp|Q9SIT7|PP151_ARATH Pentatricopeptide repeat-containing protein At2g13600
OS=Arabidopsis thaliana GN=PCMP-E76 PE=3 SV=1
Length = 697
Score = 318 bits (814), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 190/592 (32%), Positives = 300/592 (50%), Gaps = 67/592 (11%)
Query: 373 ACVIKNGLGNQPSVLTALLSMYAKLGNIDSAKFLFDQIPNRNLLCWNAMMSAYVRNRFWD 432
A VIK+G N+ + L+ Y+K G+++ + +FD++P RN+ WN++++ + F D
Sbjct: 44 ASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKLGFLD 103
Query: 433 ASLAVFRQMQ--------------------------FAGLNPDAV-----SIISVLSGCS 461
+ ++FR M FA ++ + S SVLS CS
Sbjct: 104 EADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLSACS 163
Query: 462 KLDDVLLGKSAHAFSLRKGIVSNLDVLNALLMFYSDGGQFSYAFTLFHRMSTRSSVSWNT 521
L+D+ G H+ + +S++ + +AL+ YS G + A +F M R+ VSWN+
Sbjct: 164 GLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSWNS 223
Query: 522 LISRCVQNGAVEEAVILLQRMQKEGVELDMVTLISFLPNLNKNGNIKQGMVIHGYAIKTG 581
LI+ QNG EA+ + Q M + VE D VTL S + IK G +HG +K
Sbjct: 224 LITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKND 283
Query: 582 CVA-DVTFLNALITMYCNCGSTNDGRLCL----------------------------LLF 612
+ D+ NA + MY C + R L+F
Sbjct: 284 KLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAARLMF 343
Query: 613 QMGDKREISLWNAIISVYVQTNKAKQAVAFFTELLGAGLEPDNVTVLSIISAGVLINSLN 672
+R + WNA+I+ Y Q + ++A++ F L + P + + +I+ A + L+
Sbjct: 344 TKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACADLAELH 403
Query: 673 L-----THSLM-AFVIRKGLDKHVAVSNALMDSYVRCGNISMARKLFGSLIYKDAFSWSV 726
L H L F + G + + V N+L+D YV+CG + +F ++ +D SW+
Sbjct: 404 LGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNA 463
Query: 727 MINGYGLYGDGEAALELFKQMQLSGVRPNEITYLGVLSACSHAGLVEQSKMVFKSMV-EH 785
MI G+ G G ALELF++M SG +P+ IT +GVLSAC HAG VE+ + F SM +
Sbjct: 464 MIIGFAQNGYGNEALELFREMLESGEKPDHITMIGVLSACGHAGFVEEGRHYFSSMTRDF 523
Query: 786 GISQKMEHYACMVDLLGRTGHLNEAFIFVKKLPCKPSVSILESLLGACRIHGNVELGEII 845
G++ +HY CMVDLLGR G L EA ++++P +P I SLL AC++H N+ LG+ +
Sbjct: 524 GVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEMPMQPDSVIWGSLLAACKVHRNITLGKYV 583
Query: 846 SGMLFEMDPENPGSYVMLHNIYASAGRWEDAYRVRSCMKRSRLKKVPGFSLV 897
+ L E++P N G YV+L N+YA G+WED VR M++ + K PG S +
Sbjct: 584 AEKLLEVEPSNSGPYVLLSNMYAELGKWEDVMNVRKSMRKEGVTKQPGCSWI 635
Score = 197 bits (501), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 130/497 (26%), Positives = 236/497 (47%), Gaps = 72/497 (14%)
Query: 145 SDDFTFPFLIKAC--SSLSDLRIGREIHCVIFRTGYHQNLVIQTALVDFYAKKGEMLTAR 202
+D F L+ +C S LS + + R +H + ++G+ + IQ L+D Y+K G + R
Sbjct: 17 TDSSPFAKLLDSCIKSKLSAIYV-RYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGR 75
Query: 203 LLFDQIPLADLVSCNTLMAGYSFNG-LDQ------------------------------E 231
+FD++P ++ + N+++ G + G LD+ E
Sbjct: 76 QVFDKMPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEE 135
Query: 232 ALETFRRILTVGLKPNVSTFSSVIPVCTRLGHFCFGKSLHGFTIKSGYLFDDFLVPALIS 291
AL F + G N +F+SV+ C+ L G +H KS +L D ++ AL+
Sbjct: 136 ALCYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVD 195
Query: 292 MYAGDLDLSTARKLFDSLLEKNASVWNAMISAYTQSKKFFEAFEIFRQMIRAEMQPDLVT 351
MY+ +++ A+++FD + ++N WN++I+ + Q+ EA ++F+ M+ + ++PD VT
Sbjct: 196 MYSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVT 255
Query: 352 FVSIIPSCENYCSFQCGESLTACVIKNG-LGNQPSVLTALLSMYAKLGNIDSAKFLFDQI 410
S+I +C + + + G+ + V+KN L N + A + MYAK I A+F+FD +
Sbjct: 256 LASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSM 315
Query: 411 P-------------------------------NRNLLCWNAMMSAYVRNRFWDASLAVFR 439
P RN++ WNA+++ Y +N + +L++F
Sbjct: 316 PIRNVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFC 375
Query: 440 QMQFAGLNPDAVSIISVLSGCSKLDDVLLGKSA------HAFSLRKGIVSNLDVLNALLM 493
++ + P S ++L C+ L ++ LG A H F + G ++ V N+L+
Sbjct: 376 LLKRESVCPTHYSFANILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLID 435
Query: 494 FYSDGGQFSYAFTLFHRMSTRSSVSWNTLISRCVQNGAVEEAVILLQRMQKEGVELDMVT 553
Y G + +F +M R VSWN +I QNG EA+ L + M + G + D +T
Sbjct: 436 MYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALELFREMLESGEKPDHIT 495
Query: 554 LISFLPNLNKNGNIKQG 570
+I L G +++G
Sbjct: 496 MIGVLSACGHAGFVEEG 512
Score = 177 bits (448), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 120/453 (26%), Positives = 216/453 (47%), Gaps = 44/453 (9%)
Query: 116 NLMIRGLSNCGLHADLLHVYIKCRLSGCPSDDFTFPFLIKACSSLSDLRIGREIHCVIFR 175
N M+ G + + L + G ++++F ++ ACS L+D+ G ++H +I +
Sbjct: 121 NSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAK 180
Query: 176 TGYHQNLVIQTALVDFYAKKGEMLTARLLFDQIPLADLVSCNTLMAGYSFNGLDQEALET 235
+ + ++ I +ALVD Y+K G + A+ +FD++ ++VS N+L+ + NG EAL+
Sbjct: 181 SPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDV 240
Query: 236 FRRILTVGLKPNVSTFSSVIPVCTRLGHFCFGKSLHGFTIKSGYLFDDFLVP-ALISMYA 294
F+ +L ++P+ T +SVI C L G+ +HG +K+ L +D ++ A + MYA
Sbjct: 241 FQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYA 300
Query: 295 GDLDLSTARKLFDS-------------------------------LLEKNASVWNAMISA 323
+ AR +FDS + E+N WNA+I+
Sbjct: 301 KCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIAG 360
Query: 324 YTQSKKFFEAFEIFRQMIRAEMQPDLVTFVSIIPSCENYCSFQCGESLTACVIKNGLGNQ 383
YTQ+ + EA +F + R + P +F +I+ +C + G V+K+G Q
Sbjct: 361 YTQNGENEEALSLFCLLKRESVCPTHYSFANILKACADLAELHLGMQAHVHVLKHGFKFQ 420
Query: 384 PS------VLTALLSMYAKLGNIDSAKFLFDQIPNRNLLCWNAMMSAYVRNRFWDASLAV 437
V +L+ MY K G ++ +F ++ R+ + WNAM+ + +N + + +L +
Sbjct: 421 SGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALEL 480
Query: 438 FRQMQFAGLNPDAVSIISVLSGCSKLDDVLLGKSAHAFSLRK---GIVSNLDVLNALLMF 494
FR+M +G PD +++I VLS C V G+ H FS G+ D ++
Sbjct: 481 FREMLESGEKPDHITMIGVLSACGHAGFVEEGR--HYFSSMTRDFGVAPLRDHYTCMVDL 538
Query: 495 YSDGGQFSYAFTLFHRMSTR-SSVSWNTLISRC 526
G A ++ M + SV W +L++ C
Sbjct: 539 LGRAGFLEEAKSMIEEMPMQPDSVIWGSLLAAC 571
>sp|Q9MA95|PP214_ARATH Putative pentatricopeptide repeat-containing protein At3g05240
OS=Arabidopsis thaliana GN=PCMP-E82 PE=3 SV=2
Length = 565
Score = 315 bits (808), Expect = 9e-85, Method: Compositional matrix adjust.
Identities = 181/509 (35%), Positives = 268/509 (52%), Gaps = 13/509 (2%)
Query: 399 NIDSAKFLFDQIPNRNLLCWNAMMSAYVRNRFWDASLAVFRQMQFAGLNPDAVSIISVLS 458
N+ A+ +F+ I ++ WN+M+ Y + D +L +++M G +PD + VL
Sbjct: 56 NLSYARSVFESIDCPSVYIWNSMIRGYSNSPNPDKALIFYQEMLRKGYSPDYFTFPYVLK 115
Query: 459 GCSKLDDVLLGKSAHAFSLRKGIVSNLDVLNALLMFYSDGGQFSYAFTLFHRMSTRSSVS 518
CS L D+ G H F ++ G N+ V LL Y G+ +Y +F + + V+
Sbjct: 116 ACSGLRDIQFGSCVHGFVVKTGFEVNMYVSTCLLHMYMCCGEVNYGLRVFEDIPQWNVVA 175
Query: 519 WNTLISRCVQNGAVEEAVILLQRMQKEGVELDMVTLISFLPNLNKNGNIKQGMVIHGY-- 576
W +LIS V N +A+ + MQ GV+ + ++ L + +I G HG+
Sbjct: 176 WGSLISGFVNNNRFSDAIEAFREMQSNGVKANETIMVDLLVACGRCKDIVTGKWFHGFLQ 235
Query: 577 ------AIKTGCVADVTFLNALITMYCNCGSTNDGRLCLLLFQMGDKREISLWNAIISVY 630
++ +V +LI MY CG D R LF +R + WN+II+ Y
Sbjct: 236 GLGFDPYFQSKVGFNVILATSLIDMYAKCG---DLRTARYLFDGMPERTLVSWNSIITGY 292
Query: 631 VQTNKAKQAVAFFTELLGAGLEPDNVTVLSIISAGVLINSLNLTHSLMAFVIRKGLDKHV 690
Q A++A+ F ++L G+ PD VT LS+I A ++ L S+ A+V + G K
Sbjct: 293 SQNGDAEEALCMFLDMLDLGIAPDKVTFLSVIRASMIQGCSQLGQSIHAYVSKTGFVKDA 352
Query: 691 AVSNALMDSYVRCGNISMARKLFGSLIYKDAFSWSVMINGYGLYGDGEAALELFKQMQLS 750
A+ AL++ Y + G+ A+K F L KD +W+V+I G +G G AL +F++MQ
Sbjct: 353 AIVCALVNMYAKTGDAESAKKAFEDLEKKDTIAWTVVIIGLASHGHGNEALSIFQRMQEK 412
Query: 751 G-VRPNEITYLGVLSACSHAGLVEQSKMVFKSMVE-HGISQKMEHYACMVDLLGRTGHLN 808
G P+ ITYLGVL ACSH GLVE+ + F M + HG+ +EHY CMVD+L R G
Sbjct: 413 GNATPDGITYLGVLYACSHIGLVEEGQRYFAEMRDLHGLEPTVEHYGCMVDILSRAGRFE 472
Query: 809 EAFIFVKKLPCKPSVSILESLLGACRIHGNVELGEIISGMLFEMDPENPGSYVMLHNIYA 868
EA VK +P KP+V+I +LL C IH N+EL + I M+ E + G YV+L NIYA
Sbjct: 473 EAERLVKTMPVKPNVNIWGALLNGCDIHENLELTDRIRSMVAEPEELGSGIYVLLSNIYA 532
Query: 869 SAGRWEDAYRVRSCMKRSRLKKVPGFSLV 897
AGRW D +R MK R+ KV G S V
Sbjct: 533 KAGRWADVKLIRESMKSKRVDKVLGHSSV 561
Score = 215 bits (548), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 140/460 (30%), Positives = 231/460 (50%), Gaps = 13/460 (2%)
Query: 79 LPLPALALRTLEAFEITSYHIALSSFPIIKKPCVFLQNLMIRGLSNCGLHADLLHVYIKC 138
+PL L E + A S F I P V++ N MIRG SN L Y +
Sbjct: 39 IPLSRLIDFCTTCPETMNLSYARSVFESIDCPSVYIWNSMIRGYSNSPNPDKALIFYQEM 98
Query: 139 RLSGCPSDDFTFPFLIKACSSLSDLRIGREIHCVIFRTGYHQNLVIQTALVDFYAKKGEM 198
G D FTFP+++KACS L D++ G +H + +TG+ N+ + T L+ Y GE+
Sbjct: 99 LRKGYSPDYFTFPYVLKACSGLRDIQFGSCVHGFVVKTGFEVNMYVSTCLLHMYMCCGEV 158
Query: 199 LTARLLFDQIPLADLVSCNTLMAGYSFNGLDQEALETFRRILTVGLKPNVSTFSSVIPVC 258
+F+ IP ++V+ +L++G+ N +A+E FR + + G+K N + ++ C
Sbjct: 159 NYGLRVFEDIPQWNVVAWGSLISGFVNNNRFSDAIEAFREMQSNGVKANETIMVDLLVAC 218
Query: 259 TRLGHFCFGKSLHGFT--------IKSGYLFDDFLVPALISMYAGDLDLSTARKLFDSLL 310
R GK HGF +S F+ L +LI MYA DL TAR LFD +
Sbjct: 219 GRCKDIVTGKWFHGFLQGLGFDPYFQSKVGFNVILATSLIDMYAKCGDLRTARYLFDGMP 278
Query: 311 EKNASVWNAMISAYTQSKKFFEAFEIFRQMIRAEMQPDLVTFVSIIPSCENYCSFQCGES 370
E+ WN++I+ Y+Q+ EA +F M+ + PD VTF+S+I + Q G+S
Sbjct: 279 ERTLVSWNSIITGYSQNGDAEEALCMFLDMLDLGIAPDKVTFLSVIRASMIQGCSQLGQS 338
Query: 371 LTACVIKNGLGNQPSVLTALLSMYAKLGNIDSAKFLFDQIPNRNLLCWNAMMSAYVRNRF 430
+ A V K G +++ AL++MYAK G+ +SAK F+ + ++ + W ++ +
Sbjct: 339 IHAYVSKTGFVKDAAIVCALVNMYAKTGDAESAKKAFEDLEKKDTIAWTVVIIGLASHGH 398
Query: 431 WDASLAVFRQMQFAG-LNPDAVSIISVLSGCSKLDDVLLGKSAHAFSLRK--GIVSNLDV 487
+ +L++F++MQ G PD ++ + VL CS + V G+ A +R G+ ++
Sbjct: 399 GNEALSIFQRMQEKGNATPDGITYLGVLYACSHIGLVEEGQRYFA-EMRDLHGLEPTVEH 457
Query: 488 LNALLMFYSDGGQFSYAFTLFHRMSTRSSVS-WNTLISRC 526
++ S G+F A L M + +V+ W L++ C
Sbjct: 458 YGCMVDILSRAGRFEEAERLVKTMPVKPNVNIWGALLNGC 497
Score = 190 bits (483), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 139/541 (25%), Positives = 244/541 (45%), Gaps = 24/541 (4%)
Query: 270 LHGFTIKSGYLFDDFLVPALI---SMYAGDLDLSTARKLFDSLLEKNASVWNAMISAYTQ 326
LHG IKS + + + LI + ++LS AR +F+S+ + +WN+MI Y+
Sbjct: 25 LHGLMIKSSVIRNVIPLSRLIDFCTTCPETMNLSYARSVFESIDCPSVYIWNSMIRGYSN 84
Query: 327 SKKFFEAFEIFRQMIRAEMQPDLVTFVSIIPSCENYCSFQCGESLTACVIKNGLGNQPSV 386
S +A +++M+R PD TF ++ +C Q G + V+K G V
Sbjct: 85 SPNPDKALIFYQEMLRKGYSPDYFTFPYVLKACSGLRDIQFGSCVHGFVVKTGFEVNMYV 144
Query: 387 LTALLSMYAKLGNIDSAKFLFDQIPNRNLLCWNAMMSAYVRNRFWDASLAVFRQMQFAGL 446
T LL MY G ++ +F+ IP N++ W +++S +V N + ++ FR+MQ G+
Sbjct: 145 STCLLHMYMCCGEVNYGLRVFEDIPQWNVVAWGSLISGFVNNNRFSDAIEAFREMQSNGV 204
Query: 447 NPDAVSIISVLSGCSKLDDVLLGKSAHAF--------SLRKGIVSNLDVLNALLMFYSDG 498
+ ++ +L C + D++ GK H F + + N+ + +L+ Y+
Sbjct: 205 KANETIMVDLLVACGRCKDIVTGKWFHGFLQGLGFDPYFQSKVGFNVILATSLIDMYAKC 264
Query: 499 GQFSYAFTLFHRMSTRSSVSWNTLISRCVQNGAVEEAVILLQRMQKEGVELDMVTLISFL 558
G A LF M R+ VSWN++I+ QNG EEA+ + M G+ D VT +S +
Sbjct: 265 GDLRTARYLFDGMPERTLVSWNSIITGYSQNGDAEEALCMFLDMLDLGIAPDKVTFLSVI 324
Query: 559 PNLNKNGNIKQGMVIHGYAIKTGCVADVTFLNALITMYCNCGSTNDGRLCLLLFQMGDKR 618
G + G IH Y KTG V D + AL+ MY G + F+ +K+
Sbjct: 325 RASMIQGCSQLGQSIHAYVSKTGFVKDAAIVCALVNMYAKTGDAESAKKA---FEDLEKK 381
Query: 619 EISLWNAIISVYVQTNKAKQAVAFFTELLGAG-LEPDNVTVLSIISAGVLINSLNLTHSL 677
+ W +I +A++ F + G PD +T L ++ A I +
Sbjct: 382 DTIAWTVVIIGLASHGHGNEALSIFQRMQEKGNATPDGITYLGVLYACSHIGLVEEGQRY 441
Query: 678 MAFVIR-KGLDKHVAVSNALMDSYVRCGNISMARKLFGSLIYKDAFS-WSVMINGYGLYG 735
A + GL+ V ++D R G A +L ++ K + W ++NG ++
Sbjct: 442 FAEMRDLHGLEPTVEHYGCMVDILSRAGRFEEAERLVKTMPVKPNVNIWGALLNGCDIHE 501
Query: 736 DGEAALELFKQMQLSGVRPNEI---TYLGVLSACSHAGLVEQSKMVFKSMVEHGISQKME 792
+ LEL +++ P E+ Y+ + + + AG K++ +SM + + +
Sbjct: 502 N----LELTDRIRSMVAEPEELGSGIYVLLSNIYAKAGRWADVKLIRESMKSKRVDKVLG 557
Query: 793 H 793
H
Sbjct: 558 H 558
>sp|Q9SCT2|PP277_ARATH Pentatricopeptide repeat-containing protein At3g50420
OS=Arabidopsis thaliana GN=PCMP-E85 PE=2 SV=1
Length = 794
Score = 315 bits (807), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 205/722 (28%), Positives = 352/722 (48%), Gaps = 15/722 (2%)
Query: 188 LVDFYAKKGEMLTARLLFDQIPLADLVSCNTLMAGYSFNGLDQE------ALETFRRILT 241
L+ Y + + AR +FD++P ++V+ L A + + + L +F+ I
Sbjct: 28 LISMYVRCSSLEQARKVFDKMPQRNIVTLFGLSAVFEYVSMGSSLHSQIIKLGSFQMIFF 87
Query: 242 VGLKPNVSTFSSVIPVCTRLGHFCFGKSLHGFTIKSGY---LFDDFLVPALISMYAGDLD 298
+ L S+ + C + + +H + +G + LISMY
Sbjct: 88 MPLNEIASSVVELTRKCVSITVLKRARQIHALVLTAGAGAATESPYANNNLISMYVRCGS 147
Query: 299 LSTARKLFDSLLEKNASVWNAMISAYTQSKKFFE-AFEIFRQMIRAEMQPDLVTFVSIIP 357
L ARK+FD + +N +NA+ SAY+++ F AF + M ++P+ TF S++
Sbjct: 148 LEQARKVFDKMPHRNVVSYNALYSAYSRNPDFASYAFPLTTHMAFEYVKPNSSTFTSLVQ 207
Query: 358 SCENYCSFQCGESLTACVIKNGLGNQPSVLTALLSMYAKLGNIDSAKFLFDQIPNRNLLC 417
C G SL + +IK G + V T++L MY+ G+++SA+ +FD + NR+ +
Sbjct: 208 VCAVLEDVLMGSSLNSQIIKLGYSDNVVVQTSVLGMYSSCGDLESARRIFDCVNNRDAVA 267
Query: 418 WNAMMSAYVRNRFWDASLAVFRQMQFAGLNPDAVSIISVLSGCSKLDDVLLGKSAHAFSL 477
WN M+ ++N + L FR M +G++P + VL+GCSKL LGK HA +
Sbjct: 268 WNTMIVGSLKNDKIEDGLMFFRNMLMSGVDPTQFTYSIVLNGCSKLGSYSLGKLIHARII 327
Query: 478 RKGIVSNLDVLNALLMFYSDGGQFSYAFTLFHRMSTRSSVSWNTLISRCVQNGAVEEAVI 537
+++L + NALL Y G AF +F R+ + VSWN++IS C +NG E+A++
Sbjct: 328 VSDSLADLPLDNALLDMYCSCGDMREAFYVFGRIHNPNLVSWNSIISGCSENGFGEQAML 387
Query: 538 LLQRMQKEGV-ELDMVTLISFLPNLNKNGNIKQGMVIHGYAIKTGCVADVTFLNALITMY 596
+ +R+ + D T + + + G ++HG K G V L++MY
Sbjct: 388 MYRRLLRMSTPRPDEYTFSAAISATAEPERFVHGKLLHGQVTKLGYERSVFVGTTLLSMY 447
Query: 597 CNCGSTNDGRLCLLLFQMGDKREISLWNAIISVYVQTNKAKQAVAFFTELLGAGLEPDNV 656
+ +F + +R++ LW +I + + ++ AV FF E+ D
Sbjct: 448 FK---NREAESAQKVFDVMKERDVVLWTEMIVGHSRLGNSELAVQFFIEMYREKNRSDGF 504
Query: 657 TVLSIISAGVLINSLNLTHSLMAFVIRKGLDKHVAVSNALMDSYVRCGNISMARKLFGSL 716
++ S+I A + L IR G D ++V AL+D Y + G A +F
Sbjct: 505 SLSSVIGACSDMAMLRQGEVFHCLAIRTGFDCVMSVCGALVDMYGKNGKYETAETIFSLA 564
Query: 717 IYKDAFSWSVMINGYGLYGDGEAALELFKQMQLSGVRPNEITYLGVLSACSHAGLVEQSK 776
D W+ M+ Y +G E AL F+Q+ +G P+ +TYL +L+ACSH G Q K
Sbjct: 565 SNPDLKCWNSMLGAYSQHGMVEKALSFFEQILENGFMPDAVTYLSLLAACSHRGSTLQGK 624
Query: 777 MVFKSMVEHGISQKMEHYACMVDLLGRTGHLNEAFIFVKK-LPCKPSVSILESLLGACRI 835
++ M E GI +HY+CMV+L+ + G ++EA +++ P + +LL AC
Sbjct: 625 FLWNQMKEQGIKAGFKHYSCMVNLVSKAGLVDEALELIEQSPPGNNQAELWRTLLSACVN 684
Query: 836 HGNVELGEIISGMLFEMDPENPGSYVMLHNIYASAGRWEDAYRVRSCMKRSRLKKVPGFS 895
N+++G + + ++DPE+ ++++L N+YA GRWED +R ++ K PG S
Sbjct: 685 TRNLQIGLYAAEQILKLDPEDTATHILLSNLYAVNGRWEDVAEMRRKIRGLASSKDPGLS 744
Query: 896 LV 897
+
Sbjct: 745 WI 746
Score = 208 bits (529), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 141/518 (27%), Positives = 252/518 (48%), Gaps = 10/518 (1%)
Query: 153 LIKACSSLSDLRIGREIHCVIFRTG---YHQNLVIQTALVDFYAKKGEMLTARLLFDQIP 209
L + C S++ L+ R+IH ++ G ++ L+ Y + G + AR +FD++P
Sbjct: 100 LTRKCVSITVLKRARQIHALVLTAGAGAATESPYANNNLISMYVRCGSLEQARKVFDKMP 159
Query: 210 LADLVSCNTLMAGYSFN-GLDQEALETFRRILTVGLKPNVSTFSSVIPVCTRLGHFCFGK 268
++VS N L + YS N A + +KPN STF+S++ VC L G
Sbjct: 160 HRNVVSYNALYSAYSRNPDFASYAFPLTTHMAFEYVKPNSSTFTSLVQVCAVLEDVLMGS 219
Query: 269 SLHGFTIKSGYLFDDFLVPALISMYAGDLDLSTARKLFDSLLEKNASVWNAMISAYTQSK 328
SL+ IK GY + + +++ MY+ DL +AR++FD + ++A WN MI ++
Sbjct: 220 SLNSQIIKLGYSDNVVVQTSVLGMYSSCGDLESARRIFDCVNNRDAVAWNTMIVGSLKND 279
Query: 329 KFFEAFEIFRQMIRAEMQPDLVTFVSIIPSCENYCSFQCGESLTA-CVIKNGLGNQPSVL 387
K + FR M+ + + P T+ ++ C S+ G+ + A ++ + L + P +
Sbjct: 280 KIEDGLMFFRNMLMSGVDPTQFTYSIVLNGCSKLGSYSLGKLIHARIIVSDSLADLP-LD 338
Query: 388 TALLSMYAKLGNIDSAKFLFDQIPNRNLLCWNAMMSAYVRNRFWDASLAVFRQ-MQFAGL 446
ALL MY G++ A ++F +I N NL+ WN+++S N F + ++ ++R+ ++ +
Sbjct: 339 NALLDMYCSCGDMREAFYVFGRIHNPNLVSWNSIISGCSENGFGEQAMLMYRRLLRMSTP 398
Query: 447 NPDAVSIISVLSGCSKLDDVLLGKSAHAFSLRKGIVSNLDVLNALLMFYSDGGQFSYAFT 506
PD + + +S ++ + + GK H + G ++ V LL Y + A
Sbjct: 399 RPDEYTFSAAISATAEPERFVHGKLLHGQVTKLGYERSVFVGTTLLSMYFKNREAESAQK 458
Query: 507 LFHRMSTRSSVSWNTLISRCVQNGAVEEAVILLQRMQKEGVELDMVTLISFLPNLNKNGN 566
+F M R V W +I + G E AV M +E D +L S + +
Sbjct: 459 VFDVMKERDVVLWTEMIVGHSRLGNSELAVQFFIEMYREKNRSDGFSLSSVIGACSDMAM 518
Query: 567 IKQGMVIHGYAIKTGCVADVTFLNALITMYCNCGSTNDGRLCLLLFQMGDKREISLWNAI 626
++QG V H AI+TG ++ AL+ MY G +F + ++ WN++
Sbjct: 519 LRQGEVFHCLAIRTGFDCVMSVCGALVDMYGKNGKYETAE---TIFSLASNPDLKCWNSM 575
Query: 627 ISVYVQTNKAKQAVAFFTELLGAGLEPDNVTVLSIISA 664
+ Y Q ++A++FF ++L G PD VT LS+++A
Sbjct: 576 LGAYSQHGMVEKALSFFEQILENGFMPDAVTYLSLLAA 613
Score = 196 bits (497), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 143/524 (27%), Positives = 255/524 (48%), Gaps = 8/524 (1%)
Query: 149 TFPFLIKACSSLSDLRIGREIHCVIFRTGYHQNLVIQTALVDFYAKKGEMLTARLLFDQI 208
TF L++ C+ L D+ +G ++ I + GY N+V+QT+++ Y+ G++ +AR +FD +
Sbjct: 201 TFTSLVQVCAVLEDVLMGSSLNSQIIKLGYSDNVVVQTSVLGMYSSCGDLESARRIFDCV 260
Query: 209 PLADLVSCNTLMAGYSFNGLDQEALETFRRILTVGLKPNVSTFSSVIPVCTRLGHFCFGK 268
D V+ NT++ G N ++ L FR +L G+ P T+S V+ C++LG + GK
Sbjct: 261 NNRDAVAWNTMIVGSLKNDKIEDGLMFFRNMLMSGVDPTQFTYSIVLNGCSKLGSYSLGK 320
Query: 269 SLHGFTIKSGYLFDDFLVPALISMYAGDLDLSTARKLFDSLLEKNASVWNAMISAYTQSK 328
+H I S L D L AL+ MY D+ A +F + N WN++IS +++
Sbjct: 321 LIHARIIVSDSLADLPLDNALLDMYCSCGDMREAFYVFGRIHNPNLVSWNSIISGCSENG 380
Query: 329 KFFEAFEIFRQMIR-AEMQPDLVTFVSIIPSCENYCSFQCGESLTACVIKNGLGNQPSVL 387
+A ++R+++R + +PD TF + I + F G+ L V K G V
Sbjct: 381 FGEQAMLMYRRLLRMSTPRPDEYTFSAAISATAEPERFVHGKLLHGQVTKLGYERSVFVG 440
Query: 388 TALLSMYAKLGNIDSAKFLFDQIPNRNLLCWNAMMSAYVRNRFWDASLAV--FRQMQFAG 445
T LLSMY K +SA+ +FD + R+++ W M+ + +R ++ LAV F +M
Sbjct: 441 TTLLSMYFKNREAESAQKVFDVMKERDVVLWTEMIVGH--SRLGNSELAVQFFIEMYREK 498
Query: 446 LNPDAVSIISVLSGCSKLDDVLLGKSAHAFSLRKGIVSNLDVLNALLMFYSDGGQFSYAF 505
D S+ SV+ CS + + G+ H ++R G + V AL+ Y G++ A
Sbjct: 499 NRSDGFSLSSVIGACSDMAMLRQGEVFHCLAIRTGFDCVMSVCGALVDMYGKNGKYETAE 558
Query: 506 TLFHRMSTRSSVSWNTLISRCVQNGAVEEAVILLQRMQKEGVELDMVTLISFLPNLNKNG 565
T+F S WN+++ Q+G VE+A+ +++ + G D VT +S L + G
Sbjct: 559 TIFSLASNPDLKCWNSMLGAYSQHGMVEKALSFFEQILENGFMPDAVTYLSLLAACSHRG 618
Query: 566 NIKQGMVIHGYAIKTGCVADVTFLNALITMYCNCGSTNDGRLCLLLFQMGDKREISLWNA 625
+ QG + + G A + ++ + G ++ L L+ + LW
Sbjct: 619 STLQGKFLWNQMKEQGIKAGFKHYSCMVNLVSKAGLVDEA-LELIEQSPPGNNQAELWRT 677
Query: 626 IISVYVQTNKAKQAVAFFTELLGAGLEPDNVTVLSIISAGVLIN 669
++S V T + + ++L L+P++ ++S +N
Sbjct: 678 LLSACVNTRNLQIGLYAAEQIL--KLDPEDTATHILLSNLYAVN 719
Score = 189 bits (480), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 123/415 (29%), Positives = 203/415 (48%), Gaps = 3/415 (0%)
Query: 116 NLMIRGLSNCGLHADLLHVYIKCRLSGCPSDDFTFPFLIKACSSLSDLRIGREIHCVIFR 175
N MI G D L + +SG FT+ ++ CS L +G+ IH I
Sbjct: 269 NTMIVGSLKNDKIEDGLMFFRNMLMSGVDPTQFTYSIVLNGCSKLGSYSLGKLIHARIIV 328
Query: 176 TGYHQNLVIQTALVDFYAKKGEMLTARLLFDQIPLADLVSCNTLMAGYSFNGLDQEALET 235
+ +L + AL+D Y G+M A +F +I +LVS N++++G S NG ++A+
Sbjct: 329 SDSLADLPLDNALLDMYCSCGDMREAFYVFGRIHNPNLVSWNSIISGCSENGFGEQAMLM 388
Query: 236 FRRILTVGL-KPNVSTFSSVIPVCTRLGHFCFGKSLHGFTIKSGYLFDDFLVPALISMYA 294
+RR+L + +P+ TFS+ I F GK LHG K GY F+ L+SMY
Sbjct: 389 YRRLLRMSTPRPDEYTFSAAISATAEPERFVHGKLLHGQVTKLGYERSVFVGTTLLSMYF 448
Query: 295 GDLDLSTARKLFDSLLEKNASVWNAMISAYTQSKKFFEAFEIFRQMIRAEMQPDLVTFVS 354
+ + +A+K+FD + E++ +W MI +++ A + F +M R + + D + S
Sbjct: 449 KNREAESAQKVFDVMKERDVVLWTEMIVGHSRLGNSELAVQFFIEMYREKNRSDGFSLSS 508
Query: 355 IIPSCENYCSFQCGESLTACVIKNGLGNQPSVLTALLSMYAKLGNIDSAKFLFDQIPNRN 414
+I +C + + GE I+ G SV AL+ MY K G ++A+ +F N +
Sbjct: 509 VIGACSDMAMLRQGEVFHCLAIRTGFDCVMSVCGALVDMYGKNGKYETAETIFSLASNPD 568
Query: 415 LLCWNAMMSAYVRNRFWDASLAVFRQMQFAGLNPDAVSIISVLSGCSKLDDVLLGKSAHA 474
L CWN+M+ AY ++ + +L+ F Q+ G PDAV+ +S+L+ CS L GK
Sbjct: 569 LKCWNSMLGAYSQHGMVEKALSFFEQILENGFMPDAVTYLSLLAACSHRGSTLQGKFLWN 628
Query: 475 FSLRKGIVSNLDVLNALLMFYSDGGQFSYAFTLFHRMSTRSSVS--WNTLISRCV 527
+GI + + ++ S G A L + ++ + W TL+S CV
Sbjct: 629 QMKEQGIKAGFKHYSCMVNLVSKAGLVDEALELIEQSPPGNNQAELWRTLLSACV 683
Score = 93.6 bits (231), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 67/236 (28%), Positives = 107/236 (45%), Gaps = 16/236 (6%)
Query: 104 FPIIKKPCVFLQNLMIRGLSNCGLHADLLHVYIKCRLSGCPSDDFTFPFLIKACSSLSDL 163
F ++K+ V L MI G S G + +I+ SD F+ +I ACS ++ L
Sbjct: 460 FDVMKERDVVLWTEMIVGHSRLGNSELAVQFFIEMYREKNRSDGFSLSSVIGACSDMAML 519
Query: 164 RIGREIHCVIFRTGYHQNLVIQTALVDFYAKKGEMLTARLLFDQIPLADLVSCNTLMAGY 223
R G HC+ RTG+ + + ALVD Y K G+ TA +F DL N+++ Y
Sbjct: 520 RQGEVFHCLAIRTGFDCVMSVCGALVDMYGKNGKYETAETIFSLASNPDLKCWNSMLGAY 579
Query: 224 SFNGLDQEALETFRRILTVGLKPNVSTFSSVIPVCTRLGHFCFGKSLHGFTIKSGYLFDD 283
S +G+ ++AL F +IL G P+ T+ S++ C+ G GK L + G
Sbjct: 580 SQHGMVEKALSFFEQILENGFMPDAVTYLSLLAACSHRGSTLQGKFLWNQMKEQG----- 634
Query: 284 FLVPALISMYAGDLDLSTARKLFDSLLE---------KNASVWNAMISAYTQSKKF 330
+ A Y+ ++L + L D LE A +W ++SA ++
Sbjct: 635 --IKAGFKHYSCMVNLVSKAGLVDEALELIEQSPPGNNQAELWRTLLSACVNTRNL 688
Score = 50.4 bits (119), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 45/200 (22%), Positives = 85/200 (42%), Gaps = 12/200 (6%)
Query: 578 IKTGCVADVTFLNA-LITMYCNCGSTNDGRLCLLLFQMGDKREISLWN-AIISVYVQTNK 635
++T A+ + N LI+MY C S R + +M + ++L+ + + YV
Sbjct: 13 VETDAAAEYPYANNNLISMYVRCSSLEQAR--KVFDKMPQRNIVTLFGLSAVFEYVSMGS 70
Query: 636 AKQA----VAFFTELLGAGLEPDNVTVLSIISAGVLINSLNLTHSLMAFVIRKGLDKHVA 691
+ + + F + L +V+ + V I L + A V+ G
Sbjct: 71 SLHSQIIKLGSFQMIFFMPLNEIASSVVELTRKCVSITVLKRARQIHALVLTAGAGAATE 130
Query: 692 ---VSNALMDSYVRCGNISMARKLFGSLIYKDAFSWSVMINGYGLYGD-GEAALELFKQM 747
+N L+ YVRCG++ ARK+F + +++ S++ + + Y D A L M
Sbjct: 131 SPYANNNLISMYVRCGSLEQARKVFDKMPHRNVVSYNALYSAYSRNPDFASYAFPLTTHM 190
Query: 748 QLSGVRPNEITYLGVLSACS 767
V+PN T+ ++ C+
Sbjct: 191 AFEYVKPNSSTFTSLVQVCA 210
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.325 0.138 0.412
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 309,784,575
Number of Sequences: 539616
Number of extensions: 12543299
Number of successful extensions: 48474
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 398
Number of HSP's successfully gapped in prelim test: 42
Number of HSP's that attempted gapping in prelim test: 36457
Number of HSP's gapped (non-prelim): 3168
length of query: 899
length of database: 191,569,459
effective HSP length: 127
effective length of query: 772
effective length of database: 123,038,227
effective search space: 94985511244
effective search space used: 94985511244
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 66 (30.0 bits)