BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>045606
MQATESARAKIQANNSPRSSPDVQDRDTYIKKRHSLPVANGRHGSPRIQRSLSQAQQGAK
GNGTLHVTCPNTDLGTVGLLDVTVHIFKPQFFETLMVLIVDICRELE

High Scoring Gene Products

Symbol, full name Information P value
iqd32
AT1G19870 		protein from Arabidopsis thaliana 2.2e-15

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  045606
        (107 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2035428 - symbol:iqd32 "AT1G19870" species:370...   205  2.2e-15   1


>TAIR|locus:2035428 [details] [associations]
            symbol:iqd32 "AT1G19870" species:3702 "Arabidopsis
            thaliana" [GO:0005516 "calmodulin binding" evidence=ISS]
            [GO:0009941 "chloroplast envelope" evidence=IDA] [GO:0005886
            "plasma membrane" evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
            [GO:0005829 "cytosol" evidence=IDA] [GO:0009737 "response to
            abscisic acid stimulus" evidence=IDA] [GO:0000394 "RNA splicing,
            via endonucleolytic cleavage and ligation" evidence=RCA]
            [GO:0009086 "methionine biosynthetic process" evidence=RCA]
            [GO:0010048 "vernalization response" evidence=RCA]
            InterPro:IPR000048 Pfam:PF00612 PROSITE:PS50096 SMART:SM00015
            EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005829 GO:GO:0005886
            GO:GO:0009737 GO:GO:0005634 GO:GO:0009941 EMBL:AC007797
            InterPro:IPR025064 Pfam:PF13178 EMBL:AY102110 EMBL:BT001081
            EMBL:AY084918 EMBL:AK220728 IPI:IPI00532313 PIR:A86332
            RefSeq:NP_564097.1 UniGene:At.16210 UniGene:At.68129
            ProteinModelPortal:Q9FXI5 SMR:Q9FXI5 STRING:Q9FXI5 PaxDb:Q9FXI5
            PRIDE:Q9FXI5 EnsemblPlants:AT1G19870.1 GeneID:838575
            KEGG:ath:AT1G19870 TAIR:At1g19870 eggNOG:NOG279469
            HOGENOM:HOG000083907 InParanoid:Q9FXI5 OMA:HGTPSSE
            Genevestigator:Q9FXI5 Uniprot:Q9FXI5
        Length = 794

 Score = 205 (77.2 bits), Expect = 2.2e-15, P = 2.2e-15
 Identities = 43/62 (69%), Positives = 50/62 (80%)

Query:     1 MQATESARAKIQANNSPRSSPDVQDRDTY-IKKRHSLP-VANGRHGSPRIQRSLSQAQQG 58
             MQ T+SA+AK+Q +NSPRSSPD+Q+RD    KKRHSLP V NG+  SPRIQRS SQAQQG
Sbjct:   727 MQPTQSAKAKVQEHNSPRSSPDLQERDVVSAKKRHSLPGVTNGKQVSPRIQRSASQAQQG 786

Query:    59 AK 60
              K
Sbjct:   787 TK 788


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.317   0.132   0.381    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      107       107   0.00091  102 3  11 22  0.43    30
                                                     29  0.40    32


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  531 (57 KB)
  Total size of DFA:  106 KB (2073 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  12.13u 0.09s 12.22t   Elapsed:  00:00:00
  Total cpu time:  12.13u 0.09s 12.22t   Elapsed:  00:00:00
  Start:  Thu May  9 20:33:04 2013   End:  Thu May  9 20:33:04 2013

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