BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 045606
         (107 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|Q9FXI5|IQD32_ARATH Protein IQ-DOMAIN 32 OS=Arabidopsis thaliana GN=IQD32 PE=1 SV=3
          Length = 794

 Score = 83.2 bits (204), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 43/62 (69%), Positives = 50/62 (80%), Gaps = 2/62 (3%)

Query: 1   MQATESARAKIQANNSPRSSPDVQDRDTY-IKKRHSLP-VANGRHGSPRIQRSLSQAQQG 58
           MQ T+SA+AK+Q +NSPRSSPD+Q+RD    KKRHSLP V NG+  SPRIQRS SQAQQG
Sbjct: 727 MQPTQSAKAKVQEHNSPRSSPDLQERDVVSAKKRHSLPGVTNGKQVSPRIQRSASQAQQG 786

Query: 59  AK 60
            K
Sbjct: 787 TK 788


>sp|Q8L4D8|IQD31_ARATH Protein IQ-DOMAIN 31 OS=Arabidopsis thaliana GN=IQD31 PE=1 SV=1
          Length = 587

 Score = 36.6 bits (83), Expect = 0.047,   Method: Compositional matrix adjust.
 Identities = 23/53 (43%), Positives = 31/53 (58%), Gaps = 3/53 (5%)

Query: 1   MQATESARAKIQANNSPRSSPDVQDRDTYIKKRHSLPV-ANGR--HGSPRIQR 50
           MQAT+SA+AK++   SP+S+         + +RHSLP   NGR    SPR  R
Sbjct: 502 MQATKSAKAKLRLQGSPKSAEQDGTEKATVPRRHSLPSPGNGRITSHSPRTTR 554


>sp|A5PL33|KRBA1_HUMAN Protein KRBA1 OS=Homo sapiens GN=KRBA1 PE=1 SV=3
          Length = 1030

 Score = 33.5 bits (75), Expect = 0.36,   Method: Compositional matrix adjust.
 Identities = 21/55 (38%), Positives = 28/55 (50%), Gaps = 6/55 (10%)

Query: 36  LPVANGRHGSP------RIQRSLSQAQQGAKGNGTLHVTCPNTDLGTVGLLDVTV 84
           LP A  RH SP      R+Q +    ++G+ G G L    P+ DLG  GLL V +
Sbjct: 279 LPEAQDRHPSPSGVGNRRLQENPGAWKRGSGGPGYLLTPPPHPDLGAGGLLSVKM 333


>sp|Q8L7E5|WIT1_ARATH WPP domain-interacting tail-anchored protein 1 OS=Arabidopsis
           thaliana GN=WIT1 PE=1 SV=2
          Length = 703

 Score = 31.6 bits (70), Expect = 1.5,   Method: Composition-based stats.
 Identities = 29/108 (26%), Positives = 46/108 (42%), Gaps = 8/108 (7%)

Query: 3   ATESARAKIQANNSPRSSPDVQDRDTYIKKRHSLPVANGRHGSPRIQRSLSQAQQGAKGN 62
           A E  R   Q  N  R +  +  +   + K   +   NG   SP+  ++ S   QG++  
Sbjct: 587 AAERERLHKQITNLSRENCVLMVKLKKVGKTGYMESGNGSEVSPKSDQNASSCHQGSRLQ 646

Query: 63  GT-LHVTCP-------NTDLGTVGLLDVTVHIFKPQFFETLMVLIVDI 102
            T + +T P        +D+G+V  LDV    FK      L++LI  I
Sbjct: 647 ATFISLTNPEEEETGSKSDIGSVRRLDVGALRFKHILVAILVILISSI 694


>sp|B4F769|SMAL1_RAT SWI/SNF-related matrix-associated actin-dependent regulator of
           chromatin subfamily A-like protein 1 OS=Rattus
           norvegicus GN=Smarcal1 PE=2 SV=1
          Length = 910

 Score = 30.4 bits (67), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 15/39 (38%), Positives = 20/39 (51%), Gaps = 1/39 (2%)

Query: 34  HSLPVANGRHGSPRIQRSLSQAQQG-AKGNGTLHVTCPN 71
           +SLP A   H SP  Q S ++  +G  K  G +   CPN
Sbjct: 77  NSLPAAQRPHSSPCFQPSTAEEAKGLWKSEGKMSAACPN 115


>sp|P29119|FURI1_XENLA Furin-1 OS=Xenopus laevis GN=furin PE=2 SV=1
          Length = 783

 Score = 30.4 bits (67), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 24/80 (30%), Positives = 38/80 (47%), Gaps = 5/80 (6%)

Query: 5   ESARAKIQANNSPRSSPDVQDRDTYIKKRHSLPVANGRHGSPRIQRSLSQAQQGAKGNGT 64
           E     +QAN  P +S DV D+D   + R++  + + RHG+       + A  G  G G 
Sbjct: 155 EKNHPDLQANYDPAASYDVNDQDPDPQPRYT-QLNDNRHGTRCAGEVAAVANNGICGVGI 213

Query: 65  LHVTCPNTDLGTVGLLDVTV 84
            +    N ++G V +LD  V
Sbjct: 214 AY----NANIGGVRMLDGEV 229


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.317    0.132    0.381 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 39,246,883
Number of Sequences: 539616
Number of extensions: 1495178
Number of successful extensions: 2901
Number of sequences better than 100.0: 12
Number of HSP's better than 100.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 2896
Number of HSP's gapped (non-prelim): 12
length of query: 107
length of database: 191,569,459
effective HSP length: 75
effective length of query: 32
effective length of database: 151,098,259
effective search space: 4835144288
effective search space used: 4835144288
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 55 (25.8 bits)