Query 045607
Match_columns 143
No_of_seqs 34 out of 36
Neff 2.8
Searched_HMMs 13730
Date Mon Mar 25 05:59:42 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/045607.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/045607hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1eh9a2 b.71.1.1 (A:491-557) G 25.3 14 0.001 23.8 1.5 20 94-113 34-53 (67)
2 d1czfa_ b.80.1.3 (A:) Polygala 21.9 1.5E+02 0.011 22.1 7.3 72 18-90 154-235 (335)
3 d1j72a1 d.109.1.1 (A:11-124) M 21.0 15 0.0011 24.6 1.0 36 2-45 9-44 (114)
4 d1tkea2 d.67.1.1 (A:63-224) Th 19.3 20 0.0015 24.1 1.4 34 14-48 125-159 (162)
5 d2fh1a1 d.109.1.1 (A:412-532) 17.8 19 0.0014 24.1 1.0 17 30-46 27-43 (121)
6 d3cipg1 d.109.1.1 (G:2-125) Ge 17.4 25 0.0018 23.6 1.6 37 2-46 14-50 (124)
7 d2vika_ d.109.1.1 (A:) Villin, 17.1 21 0.0015 24.1 1.1 36 1-46 15-52 (126)
8 d2oyza1 b.82.1.22 (A:2-94) Unc 16.6 41 0.003 22.3 2.5 37 75-112 36-76 (93)
9 d1od3a_ b.18.1.10 (A:) Putativ 16.5 1.2E+02 0.0087 19.0 4.9 20 11-30 42-62 (132)
10 d1uzka3 g.23.1.1 (A:1529-1604) 14.1 32 0.0024 22.0 1.3 11 7-17 1-11 (76)
No 1
>d1eh9a2 b.71.1.1 (A:491-557) Glycosyltrehalose trehalohydrolase {Archaeon Sulfolobus solfataricus, km1 [TaxId: 2287]}
Probab=25.25 E-value=14 Score=23.81 Aligned_cols=20 Identities=30% Similarity=0.386 Sum_probs=13.9
Q ss_pred eccccceEEeeCCCCcccee
Q 045607 94 MQGNGNHGRASGSSFPNHAL 113 (143)
Q Consensus 94 ~~gnGt~W~~~~~~Fp~ha~ 113 (143)
+.++||--+.+.++||.|..
T Consensus 34 ~ky~G~LvlsSn~sFP~~I~ 53 (67)
T d1eh9a2 34 VKYSGTLLLSSNNSFPQHIE 53 (67)
T ss_dssp CCCCCBCCEESSSCSCSBCC
T ss_pred EEeccEEEEecCCcCchhhh
Confidence 34555555777789998865
No 2
>d1czfa_ b.80.1.3 (A:) Polygalacturonase {Fungus (Aspergillus niger), endo-polygalacturonase II [TaxId: 5061]}
Probab=21.90 E-value=1.5e+02 Score=22.12 Aligned_cols=72 Identities=17% Similarity=0.291 Sum_probs=44.0
Q ss_pred ceeeeCceEEEEEceEE-eecceEEEEeecce------EEcCCCceEEEec-cCCCCccee--eEEEEecccccceeeee
Q 045607 18 GIVAEDPVQLHISSNFF-LGDAFIVLKSINGV------AKGNNGVEIVKLD-QSNGAFKQI--DKVFVDRNTVQGMNTRA 87 (143)
Q Consensus 18 ~IV~EDPvql~Is~~fF-LGDanIvLks~~g~------~~G~~gv~IV~LD-~s~G~F~~I--dqvvVD~N~~~GM~lks 87 (143)
||=++.--.++|.+++| -||--|.+|+-... ..+++|.-|..|- ++.+.+++| ....+. +..+|+.+|+
T Consensus 154 Gidi~~s~nV~I~n~~i~tgDDcIaiks~~ni~i~n~~c~~~hG~sigslG~~~~~~v~nV~v~n~~i~-~t~~g~rIKt 232 (335)
T d1czfa_ 154 AFDVGNSVGVNIIKPWVHNQDDCLAVNSGENIWFTGGTCIGGHGLSIGSVGDRSNNVVKNVTIEHSTVS-NSENAVRIKT 232 (335)
T ss_dssp SEEECSCEEEEEESCEEECSSCSEEESSEEEEEEESCEEESSCCEEEEEECSSSCCEEEEEEEEEEEEE-EEEEEEEEEE
T ss_pred ceEecCCCeEEEEeeEEecCCceEEecCceEEEEEEEEEECCCCccccccCCCCcCCEeEEEEEeeEEE-CCCccceEec
Confidence 45555556788888766 58888999985433 4458888887776 444545554 333332 2345556666
Q ss_pred eee
Q 045607 88 TIA 90 (143)
Q Consensus 88 Tva 90 (143)
-.+
T Consensus 233 ~~g 235 (335)
T d1czfa_ 233 ISG 235 (335)
T ss_dssp ETT
T ss_pred cCC
Confidence 444
No 3
>d1j72a1 d.109.1.1 (A:11-124) Macrophage capping protein Cap G {Human (Homo sapiens) [TaxId: 9606]}
Probab=20.97 E-value=15 Score=24.61 Aligned_cols=36 Identities=28% Similarity=0.371 Sum_probs=22.4
Q ss_pred CCCceeeEeeeeecccceeeeCceEEEEEceEEeecceEEEEee
Q 045607 2 PGNTQTRIVNSYMDCTGIVAEDPVQLHISSNFFLGDAFIVLKSI 45 (143)
Q Consensus 2 pg~tqTRI~NcYlDyt~IV~EDPvql~Is~~fFLGDanIvLks~ 45 (143)
||+..=||+|.-+ +.=++ .--..||-||++|||..-
T Consensus 9 ~Gl~VWrIe~~~~-----~~v~~---~~~G~Fy~gd~Yivl~~y 44 (114)
T d1j72a1 9 PGLHVWRVEKLKP-----VPVAQ---ENQGVFFSGDSYLVLHNG 44 (114)
T ss_dssp SEEEEEEECSSSE-----EECCT---TTTTEEETTSEEEEEEEC
T ss_pred CCeEEEEEcCCEE-----EECCh---HHcCeeeCCCEEEEEEec
Confidence 6677777777421 11111 113679999999999864
No 4
>d1tkea2 d.67.1.1 (A:63-224) Threonyl-tRNA synthetase (ThrRS), second 'additional' domain {Escherichia coli [TaxId: 562]}
Probab=19.31 E-value=20 Score=24.05 Aligned_cols=34 Identities=15% Similarity=0.257 Sum_probs=25.1
Q ss_pred ecccceeeeCceEEEEEceEEeecce-EEEEeecce
Q 045607 14 MDCTGIVAEDPVQLHISSNFFLGDAF-IVLKSINGV 48 (143)
Q Consensus 14 lDyt~IV~EDPvql~Is~~fFLGDan-IvLks~~g~ 48 (143)
++.||.+ .-...+.|++.|+.||++ -.|.=|-|.
T Consensus 125 v~sTg~i-k~FkL~~vsgaYw~gd~~n~~LqRiyg~ 159 (162)
T d1tkea2 125 VPNMRFC-HHFKLMKTAGAYWRGDSNNKMLQRIYGT 159 (162)
T ss_dssp CSBGGGC-CCEEEEEEEEEEGGGCTTSCEEEEEEEE
T ss_pred cccCccc-ceEEEEEechhhcCCCCCCcccEEEEEE
Confidence 6778865 678889999999999985 355544443
No 5
>d2fh1a1 d.109.1.1 (A:412-532) Gelsolin {Human (Homo sapiens) [TaxId: 9606]}
Probab=17.83 E-value=19 Score=24.09 Aligned_cols=17 Identities=29% Similarity=0.665 Sum_probs=14.0
Q ss_pred EceEEeecceEEEEeec
Q 045607 30 SSNFFLGDAFIVLKSIN 46 (143)
Q Consensus 30 s~~fFLGDanIvLks~~ 46 (143)
-..||-||.||||-..+
T Consensus 27 ~G~Fy~gd~Yiv~~~y~ 43 (121)
T d2fh1a1 27 YGQFYGGDSYIILYNYR 43 (121)
T ss_dssp TTEEETTSEEEEEEEEE
T ss_pred ccEEeCCCeEEEEEEEE
Confidence 36799999999997654
No 6
>d3cipg1 d.109.1.1 (G:2-125) Gelsolin {Human (Homo sapiens) [TaxId: 9606]}
Probab=17.40 E-value=25 Score=23.62 Aligned_cols=37 Identities=32% Similarity=0.642 Sum_probs=23.1
Q ss_pred CCCceeeEeeeeecccceeeeCceEEEEEceEEeecceEEEEeec
Q 045607 2 PGNTQTRIVNSYMDCTGIVAEDPVQLHISSNFFLGDAFIVLKSIN 46 (143)
Q Consensus 2 pg~tqTRI~NcYlDyt~IV~EDPvql~Is~~fFLGDanIvLks~~ 46 (143)
||+..=||+|.-+= |+--.--..||-||.||+|-+..
T Consensus 14 ~Gl~VWrIe~~~~~--------~vp~~~~G~Fy~gd~YIil~ty~ 50 (124)
T d3cipg1 14 PGLQIWRVEKFDLV--------PVPTNLYGDFFTGDAYVILKTVQ 50 (124)
T ss_dssp SEEEEEEEETTEEE--------ECCGGGTTEEETTCEEEEEEEEE
T ss_pred CceEEEEEeCCEEE--------ECCHHHccEEeCCCEEEEEEEEE
Confidence 56666677665431 00001236799999999998764
No 7
>d2vika_ d.109.1.1 (A:) Villin, domain 1 (res. 1-126) {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=17.06 E-value=21 Score=24.07 Aligned_cols=36 Identities=33% Similarity=0.532 Sum_probs=23.4
Q ss_pred CCCCceeeEeeeeecccceeeeCceEE--EEEceEEeecceEEEEeec
Q 045607 1 MPGNTQTRIVNSYMDCTGIVAEDPVQL--HISSNFFLGDAFIVLKSIN 46 (143)
Q Consensus 1 lpg~tqTRI~NcYlDyt~IV~EDPvql--~Is~~fFLGDanIvLks~~ 46 (143)
+||+..=||+|..+ +.| .=-..||-||+||+|.+-+
T Consensus 15 ~~gl~VWrIe~~~~----------~~vp~~~~G~Fysgd~Yivl~ty~ 52 (126)
T d2vika_ 15 TPGIQIWRIENMEM----------VPVPTKSYGNFYEGDCYVLLSTRK 52 (126)
T ss_dssp CCEEEEEECGGGSC----------CEECTTTTTCCCSSSCEEEEEEEE
T ss_pred CCCEEEEEEeCCEE----------EECChHHcCEEeCCCEEEEEEEEE
Confidence 36666666665442 112 1236799999999998664
No 8
>d2oyza1 b.82.1.22 (A:2-94) Uncharacterized protein VPA0057 {Vibrio parahaemolyticus [TaxId: 670]}
Probab=16.58 E-value=41 Score=22.31 Aligned_cols=37 Identities=16% Similarity=0.162 Sum_probs=28.2
Q ss_pred EecccccceeeeeeeeeeeeccccceE--EeeCCCC--ccce
Q 045607 75 VDRNTVQGMNTRATIARASMQGNGNHG--RASGSSF--PNHA 112 (143)
Q Consensus 75 VD~N~~~GM~lksTvak~s~~gnGt~W--~~~~~~F--p~ha 112 (143)
...+.++=|.+-|=..+..++|. +.| |..|.+| |+++
T Consensus 36 F~T~~~E~MeivsG~l~V~lpg~-~ew~~~~~G~sF~Vpans 76 (93)
T d2oyza1 36 FGTQAPERMTVVKGALVVKRVGE-ADWTTYSSGESFDVEGNS 76 (93)
T ss_dssp EEESSCEEEEEEESEEEEEETTC-SSCEEEETTCEEEECSSE
T ss_pred EcCCCCEEEEEEeeEEEEECCCC-cccEEeCCCCeEEECCCC
Confidence 45677788888777777788777 789 7888888 6554
No 9
>d1od3a_ b.18.1.10 (A:) Putative xylanase {Clostridium stercorarium [TaxId: 1510]}
Probab=16.48 E-value=1.2e+02 Score=18.98 Aligned_cols=20 Identities=10% Similarity=-0.003 Sum_probs=15.5
Q ss_pred eeeecccceeeeC-ceEEEEE
Q 045607 11 NSYMDCTGIVAED-PVQLHIS 30 (143)
Q Consensus 11 NcYlDyt~IV~ED-Pvql~Is 30 (143)
+-||.|+-++.++ ++.+.+.
T Consensus 42 g~w~~y~~~~~~~G~y~~~~r 62 (132)
T d1od3a_ 42 GYSTTYKNIDFGDGATSVTAR 62 (132)
T ss_dssp TCEEEEEEEECTTCEEEEEEE
T ss_pred cceEEEEEEecCCCcEEEEEE
Confidence 5799999999988 6666554
No 10
>d1uzka3 g.23.1.1 (A:1529-1604) Fibrillin {Human (Homo sapiens) [TaxId: 9606]}
Probab=14.07 E-value=32 Score=21.96 Aligned_cols=11 Identities=45% Similarity=0.607 Sum_probs=9.2
Q ss_pred eeEeeeeeccc
Q 045607 7 TRIVNSYMDCT 17 (143)
Q Consensus 7 TRI~NcYlDyt 17 (143)
||-..||+||.
T Consensus 1 TR~g~CY~~~~ 11 (76)
T d1uzka3 1 TRSGNCYLDIR 11 (76)
T ss_dssp CCCEEEEEEC-
T ss_pred Ccccchhhhhh
Confidence 78899999985
Done!