BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 045611
(181 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9SZN7|HIP26_ARATH Heavy metal-associated isoprenylated plant protein 26
OS=Arabidopsis thaliana GN=HIPP26 PE=1 SV=1
Length = 153
Score = 217 bits (552), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 108/158 (68%), Positives = 125/158 (79%), Gaps = 5/158 (3%)
Query: 24 MGFLEYVSELCDFESRWHSHRKLKKRKQLQTVEIKIKMDCEGCERRVKKSVEGMKGVTQV 83
MG L++VSE+ D H H K+KKRKQLQTVEIK+KMDCEGCER+V++SVEGMKGV+ V
Sbjct: 1 MGVLDHVSEMFDCS---HGH-KIKKRKQLQTVEIKVKMDCEGCERKVRRSVEGMKGVSSV 56
Query: 84 EVDPKQSKLTVIGYVDPEKVLERVRHRTGKKAEFWPYVPSDVVPRPYAPEAYDKKAPPGY 143
++PK K+TV+GYVDP KV+ R+ HRTGKK E WPYVP DVV PYA YDKKAP GY
Sbjct: 57 TLEPKAHKVTVVGYVDPNKVVARMSHRTGKKVELWPYVPYDVVAHPYAAGVYDKKAPSGY 116
Query: 144 VRNVLDDPVAAPLARASSFEVKYTTAFSDENPNACAVM 181
VR V DDP + LARASS EV+YTTAFSDENP AC VM
Sbjct: 117 VRRV-DDPGVSQLARASSTEVRYTTAFSDENPAACVVM 153
>sp|Q6BK66|CCS1_DEBHA Superoxide dismutase 1 copper chaperone OS=Debaryomyces hansenii
(strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 /
IGC 2968) GN=CCS1 PE=3 SV=2
Length = 250
Score = 37.4 bits (85), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 16/57 (28%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Query: 59 IKMDCEGCERRVKKSVEGMKGVTQVEVDPKQSKLTVIGYVDPEKVLERVRHRTGKKA 115
+ M+C+ C V S++ + G+++ ++D K + +T G V P ++++ ++ TGK A
Sbjct: 11 VPMECQSCVDSVSSSLKSLNGISKYDIDLKSNLVTTEGSVPPSEIVKAIQS-TGKDA 66
>sp|O14618|CCS_HUMAN Copper chaperone for superoxide dismutase OS=Homo sapiens GN=CCS
PE=1 SV=1
Length = 274
Score = 37.0 bits (84), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 39/68 (57%), Gaps = 1/68 (1%)
Query: 48 KRKQLQTVEIKIKMDCEGCERRVKKSVEGMKGVTQVEVDPKQSKLTVIGYVDPEKVLERV 107
+ L T+E ++M C+ C V+KS++G+ GV VEV + ++ ++ P + ++ +
Sbjct: 7 NQGTLCTLEFAVQMTCQSCVDAVRKSLQGVAGVQDVEVH-LEDQMVLVHTTLPSQEVQAL 65
Query: 108 RHRTGKKA 115
TG++A
Sbjct: 66 LEGTGRQA 73
>sp|Q59998|ATZN_SYNY3 Zinc-transporting ATPase OS=Synechocystis sp. (strain PCC 6803 /
Kazusa) GN=ziaA PE=1 SV=1
Length = 721
Score = 36.6 bits (83), Expect = 0.085, Method: Composition-based stats.
Identities = 19/61 (31%), Positives = 36/61 (59%), Gaps = 3/61 (4%)
Query: 46 LKKRKQLQTVEIKIK-MDCEGCERRVKKSVEGMKGVTQVEVDPKQSKLTVIGYVDPEKVL 104
+ + L+T ++++ MDC C+ +++ S+E +KGV + V +LTV DP++V
Sbjct: 1 MTQSSPLKTQQMQVGGMDCTSCKLKIEGSLERLKGVAEASVTVATGRLTVT--YDPKQVS 58
Query: 105 E 105
E
Sbjct: 59 E 59
>sp|Q6PWT7|CCS_PIG Copper chaperone for superoxide dismutase OS=Sus scrofa GN=CCS PE=2
SV=1
Length = 274
Score = 36.6 bits (83), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 17/69 (24%), Positives = 40/69 (57%), Gaps = 1/69 (1%)
Query: 47 KKRKQLQTVEIKIKMDCEGCERRVKKSVEGMKGVTQVEVDPKQSKLTVIGYVDPEKVLER 106
+ R+ +E ++M C+ C V +S++G+ G+ VEV ++++ ++ P +V++
Sbjct: 6 RDRETACMLEFAVQMTCQSCVDAVSRSLQGVAGIQSVEVQ-LENQMVLVQTTLPSQVVQA 64
Query: 107 VRHRTGKKA 115
+ TG++A
Sbjct: 65 LLEDTGRQA 73
>sp|Q59385|COPA_ECOLI Copper-exporting P-type ATPase A OS=Escherichia coli (strain K12)
GN=copA PE=1 SV=4
Length = 834
Score = 35.4 bits (80), Expect = 0.21, Method: Composition-based stats.
Identities = 17/56 (30%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Query: 61 MDCEGCERRVKKSVEGMKGVTQVEVDPKQSKLTVIGYVDPEKVLERVRHRTGKKAE 116
M C C RV+ +++ + GVTQ V+ + V+G P+ +++ V + G AE
Sbjct: 108 MSCASCVTRVQNALQSVPGVTQARVNLAERTALVMGSASPQDLVQAV-EKAGYGAE 162
Score = 30.8 bits (68), Expect = 5.0, Method: Composition-based stats.
Identities = 16/58 (27%), Positives = 33/58 (56%), Gaps = 3/58 (5%)
Query: 53 QTVEIKIK-MDCEGCERRVKKSVEGMKGVTQVEVDPKQSKLTVIGYVDPEKVLERVRH 109
QT+++ + + C C +RVK+S+E V Q +V ++ +T G E+++E ++
Sbjct: 3 QTIDLTLDGLSCGHCVKRVKESLEQRPDVEQADVSITEAHVT--GTASAEQLIETIKQ 58
>sp|Q8XD24|COPA_ECO57 Copper-exporting P-type ATPase A OS=Escherichia coli O157:H7
GN=copA PE=3 SV=3
Length = 834
Score = 35.4 bits (80), Expect = 0.22, Method: Composition-based stats.
Identities = 17/56 (30%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Query: 61 MDCEGCERRVKKSVEGMKGVTQVEVDPKQSKLTVIGYVDPEKVLERVRHRTGKKAE 116
M C C RV+ +++ + GVTQ V+ + V+G P+ +++ V + G AE
Sbjct: 108 MSCASCVTRVQNALQSVPGVTQARVNLAERTALVMGSASPQDLVQAV-EKAGYGAE 162
Score = 30.8 bits (68), Expect = 5.1, Method: Composition-based stats.
Identities = 16/58 (27%), Positives = 33/58 (56%), Gaps = 3/58 (5%)
Query: 53 QTVEIKIK-MDCEGCERRVKKSVEGMKGVTQVEVDPKQSKLTVIGYVDPEKVLERVRH 109
QT+++ + + C C +RVK+S+E V Q +V ++ +T G E+++E ++
Sbjct: 3 QTIDLTLDGLSCGHCVKRVKESLEQRPDVEQADVSITEAHVT--GTASAEQLIETIKQ 58
>sp|Q6CIG2|CCS1_KLULA Superoxide dismutase 1 copper chaperone OS=Kluyveromyces lactis
(strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 /
NRRL Y-1140 / WM37) GN=CCS1 PE=3 SV=1
Length = 245
Score = 35.4 bits (80), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 12/51 (23%), Positives = 28/51 (54%)
Query: 59 IKMDCEGCERRVKKSVEGMKGVTQVEVDPKQSKLTVIGYVDPEKVLERVRH 109
++M CE C ++K ++ + G+ V D K + + V G+ P ++ +++
Sbjct: 15 VEMHCESCTNDIQKCLKDVNGIKNVTFDIKDNLMNVEGHAAPSAIINALKN 65
>sp|P35670|ATP7B_HUMAN Copper-transporting ATPase 2 OS=Homo sapiens GN=ATP7B PE=1 SV=4
Length = 1465
Score = 35.0 bits (79), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 39/85 (45%), Gaps = 12/85 (14%)
Query: 46 LKKRKQLQTVEIKI-KMDCEGCERRVKKSVEGMKGVTQVEVDPKQSKLTVIGYVDPEKVL 104
L Q+ T ++I M C+ C + ++ + +KG+ ++V +Q TV YV L
Sbjct: 51 LGPSSQVATSTVRILGMTCQSCVKSIEDRISNLKGIISMKVSLEQGSATV-KYVPSVVCL 109
Query: 105 ERVRHRTGK----------KAEFWP 119
++V H+ G KA WP
Sbjct: 110 QQVCHQIGDMGFEASIAEGKAASWP 134
>sp|P37617|ATZN_ECOLI Lead, cadmium, zinc and mercury-transporting ATPase OS=Escherichia
coli (strain K12) GN=zntA PE=1 SV=1
Length = 732
Score = 34.7 bits (78), Expect = 0.34, Method: Composition-based stats.
Identities = 18/52 (34%), Positives = 25/52 (48%)
Query: 61 MDCEGCERRVKKSVEGMKGVTQVEVDPKQSKLTVIGYVDPEKVLERVRHRTG 112
MDC C R+V+ +V + GV QV+V KL V D +E + G
Sbjct: 57 MDCAACARKVENAVRQLAGVNQVQVLFATEKLVVDADNDIRAQVESALQKAG 108
>sp|Q8LPL6|AP2A1_ARATH AP-2 complex subunit alpha-1 OS=Arabidopsis thaliana GN=ALPHA-ADR
PE=1 SV=1
Length = 1012
Score = 33.9 bits (76), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 27/60 (45%), Gaps = 3/60 (5%)
Query: 96 GYVDPEKVLERVRHRTGKKAEFWPYVPS-DVVPRPYAPEAYDKKAPPGYVRNVLDDPVAA 154
G DPE V + H G + P PS D++ P A + APPG V N PV A
Sbjct: 651 GSTDPESVARSLSHPNGTLSNIDPQTPSPDLLSDLLGPLAIE--APPGAVSNEQHGPVGA 708
>sp|O32219|CADA_BACSU Cadmium, zinc and cobalt-transporting ATPase OS=Bacillus subtilis
(strain 168) GN=cadA PE=1 SV=1
Length = 702
Score = 33.9 bits (76), Expect = 0.67, Method: Composition-based stats.
Identities = 13/34 (38%), Positives = 21/34 (61%)
Query: 61 MDCEGCERRVKKSVEGMKGVTQVEVDPKQSKLTV 94
+DC C R+++ V+G+KG+ V+ S LTV
Sbjct: 13 LDCSNCARKIENGVKGIKGINGCAVNFAASTLTV 46
>sp|Q6FU61|CCS1_CANGA Superoxide dismutase 1 copper chaperone OS=Candida glabrata (strain
ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65)
GN=CCS1 PE=3 SV=1
Length = 239
Score = 33.1 bits (74), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 13/50 (26%), Positives = 25/50 (50%)
Query: 59 IKMDCEGCERRVKKSVEGMKGVTQVEVDPKQSKLTVIGYVDPEKVLERVR 108
+ M C C +KK + G+ G+ ++ D Q ++V V P ++ +R
Sbjct: 14 VPMHCTDCTDDIKKCLNGITGIKDLQFDISQQMMSVNSCVAPSVIINALR 63
>sp|P40202|CCS1_YEAST Superoxide dismutase 1 copper chaperone OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=CCS1 PE=1 SV=1
Length = 249
Score = 32.7 bits (73), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 16/57 (28%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Query: 59 IKMDCEGCERRVKKSVEGMKGVTQVEVDPKQSKLTVIGYVDPEKVLERVRHRTGKKA 115
I M CE C +K ++ + G+ + D +Q ++V V P ++ +R+ GK A
Sbjct: 13 IPMHCENCVNDIKACLKNVPGINSLNFDIEQQIMSVESSVAPSTIINTLRN-CGKDA 68
>sp|Q9JK72|CCS_RAT Copper chaperone for superoxide dismutase OS=Rattus norvegicus
GN=Ccs PE=1 SV=1
Length = 274
Score = 32.7 bits (73), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 16/61 (26%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Query: 55 VEIKIKMDCEGCERRVKKSVEGMKGVTQVEVDPKQSKLTVIGYVDPEKVLERVRHRTGKK 114
+E ++M C+ C V K+++G GV VEV ++++ ++ P + ++ + TG++
Sbjct: 14 LEFTVQMSCQSCVDAVHKTLKGAAGVQNVEVQ-LENQMVLVQTTLPSQEVQALLESTGRQ 72
Query: 115 A 115
A
Sbjct: 73 A 73
>sp|P37384|DMC1_LILLO Meiotic recombination protein DMC1 homolog OS=Lilium longiflorum
GN=LIM15 PE=2 SV=1
Length = 349
Score = 32.3 bits (72), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 31/60 (51%), Gaps = 7/60 (11%)
Query: 63 CEGCERRVKKSVEGMKGVTQVEVD---PKQSKLTVIGYVDPEKVLER----VRHRTGKKA 115
C G KK++ G+KG+++ +VD KL +GY+ VL + +R TG +A
Sbjct: 60 CNGLMMHTKKNLTGIKGLSEAKVDKICEAAEKLVNVGYITGSDVLLKRKSVIRITTGSQA 119
>sp|Q8ZCA7|COPA_YERPE Copper-exporting P-type ATPase A OS=Yersinia pestis GN=copA PE=3
SV=1
Length = 961
Score = 32.3 bits (72), Expect = 1.8, Method: Composition-based stats.
Identities = 20/65 (30%), Positives = 37/65 (56%), Gaps = 4/65 (6%)
Query: 52 LQTVEIKIK-MDCEGCERRVKKSVEGMKGVTQVEVDPKQSKLTVIGYVDPEKVLERVRHR 110
LQT + ++ + C C +RVK ++E + V EV+ +K+T G D ++E ++ +
Sbjct: 2 LQTTLLALQGLSCMNCAQRVKAALESREDVHHAEVNVHYAKVT--GEADTHALIETIK-Q 58
Query: 111 TGKKA 115
TG +A
Sbjct: 59 TGYQA 63
>sp|A1BAN1|UBIE_PARDP Ubiquinone/menaquinone biosynthesis methyltransferase ubiE
OS=Paracoccus denitrificans (strain Pd 1222) GN=ubiE
PE=3 SV=1
Length = 250
Score = 32.0 bits (71), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 34/69 (49%)
Query: 90 SKLTVIGYVDPEKVLERVRHRTGKKAEFWPYVPSDVVPRPYAPEAYDKKAPPGYVRNVLD 149
+++TV + V R R GK+A+ +V D + P+A +++D+ +RNV
Sbjct: 88 ARVTVCDMTESMLVEGRKRAEAGKQADRLAWVTGDAMALPFADDSFDRYTISFGIRNVTR 147
Query: 150 DPVAAPLAR 158
P A AR
Sbjct: 148 IPDALAEAR 156
>sp|Q7A3E6|COPA_STAAN Copper-exporting P-type ATPase A OS=Staphylococcus aureus (strain
N315) GN=copA PE=1 SV=1
Length = 802
Score = 32.0 bits (71), Expect = 2.4, Method: Composition-based stats.
Identities = 22/86 (25%), Positives = 41/86 (47%), Gaps = 4/86 (4%)
Query: 27 LEYVSELCDFESRWHSHRKLKKRKQLQTVEIKIK-MDCEGCERRVKKSVEGMKGVTQVEV 85
+EY + D + ++ + L ++TVE+ I M C C R++K + M GV V
Sbjct: 46 VEYNPDQHDVQEFINTIQHLGYGVTVETVELDITGMTCAACSSRIEKVLNKMNGVQNATV 105
Query: 86 DPKQSKLTVIGY---VDPEKVLERVR 108
+ + V Y D +K++ R++
Sbjct: 106 NLTTEQAKVDYYPEETDADKLVTRIQ 131
>sp|Q99R80|COPA_STAAM Copper-exporting P-type ATPase A OS=Staphylococcus aureus (strain
Mu50 / ATCC 700699) GN=copA PE=3 SV=1
Length = 802
Score = 32.0 bits (71), Expect = 2.4, Method: Composition-based stats.
Identities = 22/86 (25%), Positives = 41/86 (47%), Gaps = 4/86 (4%)
Query: 27 LEYVSELCDFESRWHSHRKLKKRKQLQTVEIKIK-MDCEGCERRVKKSVEGMKGVTQVEV 85
+EY + D + ++ + L ++TVE+ I M C C R++K + M GV V
Sbjct: 46 VEYNPDQHDVQEFINTIQHLGYGVTVETVELDITGMTCAACSSRIEKVLNKMNGVQNATV 105
Query: 86 DPKQSKLTVIGY---VDPEKVLERVR 108
+ + V Y D +K++ R++
Sbjct: 106 NLTTEQAKVDYYPEETDADKLVTRIQ 131
>sp|A5IVY3|COPA_STAA9 Copper-exporting P-type ATPase A OS=Staphylococcus aureus (strain
JH9) GN=copA PE=3 SV=1
Length = 802
Score = 32.0 bits (71), Expect = 2.4, Method: Composition-based stats.
Identities = 22/86 (25%), Positives = 41/86 (47%), Gaps = 4/86 (4%)
Query: 27 LEYVSELCDFESRWHSHRKLKKRKQLQTVEIKIK-MDCEGCERRVKKSVEGMKGVTQVEV 85
+EY + D + ++ + L ++TVE+ I M C C R++K + M GV V
Sbjct: 46 VEYNPDQHDVQEFINTIQHLGYGVTVETVELDITGMTCAACSSRIEKVLNKMNGVQNATV 105
Query: 86 DPKQSKLTVIGY---VDPEKVLERVR 108
+ + V Y D +K++ R++
Sbjct: 106 NLTTEQAKVDYYPEETDADKLVTRIQ 131
>sp|A6U4T8|COPA_STAA2 Copper-exporting P-type ATPase A OS=Staphylococcus aureus (strain
JH1) GN=copA PE=3 SV=1
Length = 802
Score = 32.0 bits (71), Expect = 2.4, Method: Composition-based stats.
Identities = 22/86 (25%), Positives = 41/86 (47%), Gaps = 4/86 (4%)
Query: 27 LEYVSELCDFESRWHSHRKLKKRKQLQTVEIKIK-MDCEGCERRVKKSVEGMKGVTQVEV 85
+EY + D + ++ + L ++TVE+ I M C C R++K + M GV V
Sbjct: 46 VEYNPDQHDVQEFINTIQHLGYGVTVETVELDITGMTCAACSSRIEKVLNKMNGVQNATV 105
Query: 86 DPKQSKLTVIGY---VDPEKVLERVR 108
+ + V Y D +K++ R++
Sbjct: 106 NLTTEQAKVDYYPEETDADKLVTRIQ 131
>sp|A7X6S1|COPA_STAA1 Copper-exporting P-type ATPase A OS=Staphylococcus aureus (strain
Mu3 / ATCC 700698) GN=copA PE=3 SV=1
Length = 802
Score = 32.0 bits (71), Expect = 2.4, Method: Composition-based stats.
Identities = 22/86 (25%), Positives = 41/86 (47%), Gaps = 4/86 (4%)
Query: 27 LEYVSELCDFESRWHSHRKLKKRKQLQTVEIKIK-MDCEGCERRVKKSVEGMKGVTQVEV 85
+EY + D + ++ + L ++TVE+ I M C C R++K + M GV V
Sbjct: 46 VEYNPDQHDVQEFINTIQHLGYGVTVETVELDITGMTCAACSSRIEKVLNKMNGVQNATV 105
Query: 86 DPKQSKLTVIGY---VDPEKVLERVR 108
+ + V Y D +K++ R++
Sbjct: 106 NLTTEQAKVDYYPEETDADKLVTRIQ 131
>sp|Q9WU84|CCS_MOUSE Copper chaperone for superoxide dismutase OS=Mus musculus GN=Ccs
PE=1 SV=1
Length = 274
Score = 32.0 bits (71), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 15/61 (24%), Positives = 36/61 (59%), Gaps = 1/61 (1%)
Query: 55 VEIKIKMDCEGCERRVKKSVEGMKGVTQVEVDPKQSKLTVIGYVDPEKVLERVRHRTGKK 114
+E ++M C+ C V K+++G+ GV V+V ++++ ++ P + ++ + TG++
Sbjct: 14 LEFAVQMSCQSCVDAVHKTLKGVAGVQNVDVQ-LENQMVLVQTTLPSQEVQALLESTGRQ 72
Query: 115 A 115
A
Sbjct: 73 A 73
>sp|P17239|MERA_THIFE Mercuric reductase OS=Thiobacillus ferrooxidans GN=merA PE=1 SV=2
Length = 547
Score = 31.2 bits (69), Expect = 3.6, Method: Composition-based stats.
Identities = 15/49 (30%), Positives = 29/49 (59%), Gaps = 2/49 (4%)
Query: 61 MDCEGCERRVKKSVEGMKGVTQVEVDPKQSKLTVI--GYVDPEKVLERV 107
M C+GC V+K++EG+ GV + +V + V+ G V +++++ V
Sbjct: 14 MTCDGCAAHVRKALEGVPGVREAQVSYPDATARVVLEGEVPMQRLIKAV 62
>sp|Q9YIB7|ZIC2B_XENLA Zinc finger protein ZIC 2-B OS=Xenopus laevis GN=zic2-b PE=2 SV=1
Length = 497
Score = 31.2 bits (69), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 29/117 (24%), Positives = 45/117 (38%), Gaps = 13/117 (11%)
Query: 45 KLKKRKQLQTVEIKIKMDCEGCERRVKKSVEGMKGVTQVEVD-PKQSKLTVIGYVDPEKV 103
LK K+ T E + + EGC+RR S + K + D P K+ Y P +
Sbjct: 366 NLKIHKRTHTGEKPFQCEFEGCDRRFANSSDRKKHMHVHTSDKPYLCKMCDKSYTHPSSL 425
Query: 104 LERVR-HRTGKKAEFWPYVPSDVVPRPYAPEAYDKKAPPGYV--RNVLDDPVAAPLA 157
+ ++ H + P P A Y+ PPG V + +P +P A
Sbjct: 426 RKHMKVHES---------SPQGSESSPAASSGYESSTPPGLVSPNSETQNPNLSPAA 473
>sp|O73689|ZIC1_XENLA Zinc finger protein ZIC 1 OS=Xenopus laevis GN=zic1 PE=2 SV=1
Length = 443
Score = 31.2 bits (69), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 37/99 (37%), Gaps = 11/99 (11%)
Query: 45 KLKKRKQLQTVEIKIKMDCEGCERRVKKSVEGMKGVTQVEVD-PKQSKLTVIGYVDPEKV 103
LK K+ T E K + EGC+RR S + K + D P K+ Y P +
Sbjct: 314 NLKIHKRTHTGEKPFKCEFEGCDRRFANSSDRKKHMHVHTSDKPYLCKMCDKSYTHPSSL 373
Query: 104 LERVR-HRTGKKAEFWPYVPSDVVPRPYAPEAYDKKAPP 141
+ ++ H + P P A Y+ PP
Sbjct: 374 RKHMKVHEASSQGS---------QPSPAASSGYESSTPP 403
>sp|Q91689|ZIC2A_XENLA Zinc finger protein ZIC 2-A OS=Xenopus laevis GN=zic2-a PE=2 SV=2
Length = 503
Score = 30.8 bits (68), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 39/102 (38%), Gaps = 11/102 (10%)
Query: 45 KLKKRKQLQTVEIKIKMDCEGCERRVKKSVEGMKGVTQVEVD-PKQSKLTVIGYVDPEKV 103
LK K+ T E + + EGC+RR S + K + D P K+ Y P +
Sbjct: 370 NLKIHKRTHTGEKPFQCEFEGCDRRFANSSDRKKHMHVHTSDKPYLCKMCDKSYTHPSSL 429
Query: 104 LERVR-HRTGKKAEFWPYVPSDVVPRPYAPEAYDKKAPPGYV 144
+ ++ H + P P A Y+ PPG V
Sbjct: 430 RKHMKVHESS---------PQGSESSPAASSGYESSTPPGLV 462
>sp|Q62520|ZIC2_MOUSE Zinc finger protein ZIC 2 OS=Mus musculus GN=Zic2 PE=1 SV=2
Length = 530
Score = 30.8 bits (68), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 39/102 (38%), Gaps = 11/102 (10%)
Query: 45 KLKKRKQLQTVEIKIKMDCEGCERRVKKSVEGMKGVTQVEVD-PKQSKLTVIGYVDPEKV 103
LK K+ T E + + EGC+RR S + K + D P K+ Y P +
Sbjct: 349 NLKIHKRTHTGEKPFQCEFEGCDRRFANSSDRKKHMHVHTSDKPYLCKMCDKSYTHPSSL 408
Query: 104 LERVR-HRTGKKAEFWPYVPSDVVPRPYAPEAYDKKAPPGYV 144
+ ++ H + P P A Y+ PPG V
Sbjct: 409 RKHMKVHES---------SPQGSESSPAASSGYESSTPPGLV 441
>sp|P17859|AMYA_VIGMU Alpha-amylase OS=Vigna mungo GN=AMY1.1 PE=2 SV=1
Length = 421
Score = 30.8 bits (68), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 36/82 (43%), Gaps = 3/82 (3%)
Query: 85 VDPKQSKLTVIGYVDPEKVLERV-RHRTGKKAEFWPYVPSDVVPRPYAPEAYDKKAPPGY 143
+DP +IG V PE + + H TG WP+ PSD V + YA P +
Sbjct: 284 IDPNGKPPGMIG-VKPENAVTFIDNHDTGSTQRLWPF-PSDKVMQGYAYILTHPGTPSIF 341
Query: 144 VRNVLDDPVAAPLARASSFEVK 165
+ D + +A+ SS ++
Sbjct: 342 YDHFFDWGLKEQIAKLSSIRLR 363
>sp|O95409|ZIC2_HUMAN Zinc finger protein ZIC 2 OS=Homo sapiens GN=ZIC2 PE=1 SV=2
Length = 532
Score = 30.8 bits (68), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 39/102 (38%), Gaps = 11/102 (10%)
Query: 45 KLKKRKQLQTVEIKIKMDCEGCERRVKKSVEGMKGVTQVEVD-PKQSKLTVIGYVDPEKV 103
LK K+ T E + + EGC+RR S + K + D P K+ Y P +
Sbjct: 349 NLKIHKRTHTGEKPFQCEFEGCDRRFANSSDRKKHMHVHTSDKPYLCKMCDKSYTHPSSL 408
Query: 104 LERVR-HRTGKKAEFWPYVPSDVVPRPYAPEAYDKKAPPGYV 144
+ ++ H + P P A Y+ PPG V
Sbjct: 409 RKHMKVHES---------SPQGSESSPAASSGYESSTPPGLV 441
>sp|Q8LPK4|AP2A2_ARATH AP-2 complex subunit alpha-2 OS=Arabidopsis thaliana GN=ALPHAC-AD
PE=1 SV=1
Length = 1013
Score = 30.0 bits (66), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 26/60 (43%), Gaps = 3/60 (5%)
Query: 96 GYVDPEKVLERVRHRTGKKAEFWPYVPS-DVVPRPYAPEAYDKKAPPGYVRNVLDDPVAA 154
G DPE V + H G + P PS D++ P A + APPG V PV A
Sbjct: 651 GSTDPESVARSLSHPNGTLSNIDPQTPSPDLLSDLLGPLAIE--APPGAVSYEQHGPVGA 708
>sp|Q60048|CADA_LISMN Probable cadmium-transporting ATPase OS=Listeria monocytogenes
GN=cadA PE=1 SV=1
Length = 711
Score = 30.0 bits (66), Expect = 8.1, Method: Composition-based stats.
Identities = 13/43 (30%), Positives = 26/43 (60%)
Query: 61 MDCEGCERRVKKSVEGMKGVTQVEVDPKQSKLTVIGYVDPEKV 103
+ C C + +++V+ ++GVT+ V+ SK+TV G ++V
Sbjct: 12 LSCTNCAAKFERNVKEIEGVTEAIVNFGASKITVTGEASIQQV 54
>sp|Q6BZU2|CCS1_YARLI Superoxide dismutase 1 copper chaperone OS=Yarrowia lipolytica
(strain CLIB 122 / E 150) GN=CCS1 PE=3 SV=1
Length = 234
Score = 30.0 bits (66), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 21/91 (23%), Positives = 43/91 (47%), Gaps = 7/91 (7%)
Query: 54 TVEIKIKMDCEGCERRVKKSVEGMKGVTQVEVDPKQSKLTVIGYVDPEKVLERVRHRTGK 113
T + ++CE C VK+++ ++G+ V+ ++V G P ++++ V++ GK
Sbjct: 4 TTTFAVPLECESCCDSVKQALANVQGIESVDCKLVDQLISVTGTSAPSQIVKAVQN-IGK 62
Query: 114 KA----EFWPYVPSDVVPRPYAPEAYDKKAP 140
A P + + +APE D+ P
Sbjct: 63 DAIVRGTGQPNSAAVCILESHAPE--DQAQP 91
>sp|P58414|CADA_LISMO Probable cadmium-transporting ATPase OS=Listeria monocytogenes
serovar 1/2a (strain ATCC BAA-679 / EGD-e) GN=cadA PE=3
SV=1
Length = 707
Score = 30.0 bits (66), Expect = 9.1, Method: Composition-based stats.
Identities = 12/36 (33%), Positives = 22/36 (61%)
Query: 61 MDCEGCERRVKKSVEGMKGVTQVEVDPKQSKLTVIG 96
M C C + +K+V+ ++GVT +V+ K++V G
Sbjct: 15 MSCTNCAGKFEKNVKNLEGVTDAKVNFGAGKISVYG 50
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.133 0.395
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 66,624,643
Number of Sequences: 539616
Number of extensions: 2671424
Number of successful extensions: 7422
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 32
Number of HSP's that attempted gapping in prelim test: 7390
Number of HSP's gapped (non-prelim): 58
length of query: 181
length of database: 191,569,459
effective HSP length: 110
effective length of query: 71
effective length of database: 132,211,699
effective search space: 9387030629
effective search space used: 9387030629
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 57 (26.6 bits)