Query 045613
Match_columns 190
No_of_seqs 116 out of 321
Neff 5.9
Searched_HMMs 13730
Date Mon Mar 25 06:04:43 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/045613.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/045613hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1h6ya_ b.18.1.7 (A:) Xylan-bi 85.3 4 0.00029 27.8 11.6 90 91-188 63-154 (157)
2 d1guia_ b.18.1.14 (A:) Carbohy 80.9 6.4 0.00047 26.9 10.5 84 91-187 70-155 (155)
3 d1wlfa2 b.52.2.3 (A:13-99) Per 72.1 1.5 0.00011 29.5 3.1 45 22-70 7-64 (87)
4 d2hyma2 b.1.2.1 (A:110-212) In 70.3 1.1 8.1E-05 30.6 2.2 47 78-126 53-99 (103)
5 d1fnaa_ b.1.2.1 (A:) Fibronect 38.4 20 0.0015 21.9 4.3 30 91-120 58-87 (91)
6 d2b5ib2 b.1.2.1 (B:104-207) In 32.8 28 0.002 21.3 4.3 29 91-119 70-101 (104)
7 d2gysa2 b.1.2.1 (A:104-217) Co 31.9 27 0.002 22.0 4.2 27 91-118 76-108 (114)
8 d1x5ja1 b.1.2.1 (A:8-107) Neog 27.5 60 0.0044 19.5 5.9 14 29-42 9-23 (100)
9 d1fnfa2 b.1.2.1 (A:1236-1326) 24.2 40 0.0029 20.2 3.7 28 91-122 63-90 (91)
10 d1erna2 b.1.2.1 (A:117-221) Er 23.5 49 0.0036 20.4 4.2 27 91-118 71-102 (105)
11 d3d48r2 b.1.2.1 (R:101-204) Pr 23.3 42 0.0031 20.3 3.8 27 91-118 73-100 (104)
12 d2d9qb2 b.1.2.1 (B:204-308) Gr 22.9 39 0.0029 21.0 3.6 17 91-107 72-88 (105)
13 d1fnha2 b.1.2.1 (A:93-182) Fib 21.7 47 0.0034 19.9 3.7 28 91-122 62-89 (90)
14 d1qr4a1 b.1.2.1 (A:1-87) Tenas 21.0 51 0.0037 19.6 3.8 27 91-121 59-85 (87)
15 d1fnha3 b.1.2.1 (A:183-271) Fi 20.7 50 0.0036 19.6 3.6 27 91-121 62-88 (89)
No 1
>d1h6ya_ b.18.1.7 (A:) Xylan-binding domain {Clostridium thermocellum [TaxId: 1515]}
Probab=85.31 E-value=4 Score=27.75 Aligned_cols=90 Identities=8% Similarity=0.064 Sum_probs=51.5
Q ss_pred cCCceEEEEEEEEeeeccCCceeeCeEEEEEE--CCceEEEeeeeccccccCCCeEEEEcceeEeCCCCccEEEEEEEEE
Q 045613 91 LTPKAYEIFYIVKFRVDAFGWHSVPVKFKVRV--NGEEKVKSVMLQLYREKQEEWQEIPGGDFAVPRDTVGTVEFGMFEI 168 (190)
Q Consensus 91 sp~t~Y~a~~v~kl~~~a~Gw~~~pv~~~~~~--~~g~~v~~~~~~~~~~~~dgW~EielGeF~~~~~~d~ev~fsl~E~ 168 (190)
.||++|.+.+-+|+.+...+- .+.+.+.. .++..... .+.......++|.++..+.|..+.+ ...+.|-+.
T Consensus 63 ~~g~tY~~s~~vk~~~~~~~~---~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~W~~~~~~~~~~~~~-~~~~~l~~~-- 135 (157)
T d1h6ya_ 63 VPGNTYCFSVVASFIEGASST---TFCMKLQYVDGSGTQRYD-TIDMKTVGPNQWVHLYNPQYRIPSD-ATDMYVYVA-- 135 (157)
T ss_dssp CTTCEEEEEEEEECCSSSSCE---EEEEEEEEECTTSCEEEE-EEEEEEECTTCCEEEEEEEEECCTT-CEEEEEEEE--
T ss_pred cCCCEEEEEEEEEeCCCCcce---eEEEEEEEecCCCceeEE-EeeEEEeccCccEEEEEEEEECCCC-CcEEEEEEE--
Confidence 499999999999987654332 23333333 23322111 1111122358899998888877643 233444322
Q ss_pred eCCeeeceEEEEEEEEEeee
Q 045613 169 ESDWWKGGMVLAGIVIKPKL 188 (190)
Q Consensus 169 ~~~~wK~GLiv~GieIRPk~ 188 (190)
+..-..-+.|+-+.+.|+.
T Consensus 136 -~~~~~~~~yiDDv~~~~~~ 154 (157)
T d1h6ya_ 136 -TADDTINFYIDEAIGAVAG 154 (157)
T ss_dssp -ESSCCCCEEEEEEEEEETT
T ss_pred -CCCCCceEEEeeEEEeccc
Confidence 2222233899999998875
No 2
>d1guia_ b.18.1.14 (A:) Carbohydrate binding module from laminarinase 16A {Thermotoga maritima [TaxId: 2336]}
Probab=80.94 E-value=6.4 Score=26.89 Aligned_cols=84 Identities=15% Similarity=0.249 Sum_probs=49.7
Q ss_pred cCCceEEEEEEEEeeeccCCceeeCeEEEEEEC-Cce-EEEeeeeccccccCCCeEEEEcceeEeCCCCccEEEEEEEEE
Q 045613 91 LTPKAYEIFYIVKFRVDAFGWHSVPVKFKVRVN-GEE-KVKSVMLQLYREKQEEWQEIPGGDFAVPRDTVGTVEFGMFEI 168 (190)
Q Consensus 91 sp~t~Y~a~~v~kl~~~a~Gw~~~pv~~~~~~~-~g~-~v~~~~~~~~~~~~dgW~EielGeF~~~~~~d~ev~fsl~E~ 168 (190)
.||.+|.+.|.+|-... .++.+.+... ++. .+..... .....|.++++ +|......+..+.+.+.-
T Consensus 70 ~~g~~Y~lSf~~k~~~~------~~~~~~~~~~~~~~~~~~~~~~----~~t~~W~~~s~-~f~~~~~~~~~~~l~~~~- 137 (155)
T d1guia_ 70 YRGKTYTISFKAKADTP------RPINVKILQNHDPWTNYFAQTV----NLTADWQTFTF-TYTHPDDADEVVQISFEL- 137 (155)
T ss_dssp CTTCEEEEEEEEEESSC------EEEEEEEECSSTTCCEEEEEEE----EECSSCEEEEE-EEECCTTSCSEEEEEEEC-
T ss_pred cCCCEEEEEEEEEeCCC------CcEEEEEEEcCCCCeEEeeeEE----eeccccEEEEE-EEEecCCCCccEEEEEEE-
Confidence 39999999999886321 2344444432 221 1111111 12478999885 788765445555554442
Q ss_pred eCCeeeceEEEEEEEEEee
Q 045613 169 ESDWWKGGMVLAGIVIKPK 187 (190)
Q Consensus 169 ~~~~wK~GLiv~GieIRPk 187 (190)
++.-.+.+.|+-|.|.||
T Consensus 138 -~~~~~~~~~iDnV~l~~~ 155 (155)
T d1guia_ 138 -GEGTATTIYFDDVTVSPQ 155 (155)
T ss_dssp -CSSCCCEEEEEEEEEEEC
T ss_pred -CCCCCcEEEEEEEEEEEC
Confidence 222345799999999996
No 3
>d1wlfa2 b.52.2.3 (A:13-99) Peroxisome biogenesis factor 1 (PEX-1), N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]}
Probab=72.12 E-value=1.5 Score=29.47 Aligned_cols=45 Identities=16% Similarity=0.249 Sum_probs=31.6
Q ss_pred eeccCCCeEE--Eec-----------ccceEEeCCCCCceeeeecCcchhhhccccccceEE
Q 045613 22 KDQDSSGLIK--IPV-----------RALNIIWGNDPRYWQWIKLTEENTKLLAGFEEGSML 70 (190)
Q Consensus 22 ldk~sg~~cy--Lsa-----------R~L~I~Wg~~~~YW~W~~~~~s~~~~~~rf~EvAeL 70 (190)
++=++.|.|| |++ -++...||+.|-|-.|+.-....+ .-+.|||+
T Consensus 7 v~f~~~kdcFL~lp~~~a~ql~l~q~qA~Evsw~~~pvfLSW~e~r~~~~----~~envaEi 64 (87)
T d1wlfa2 7 VAFTNARDCFLHLPRRLVAQLHLLQNQAIEVASDHQPTYLSWVEGRHFND----QSENVAEI 64 (87)
T ss_dssp EEEECCSSSCEEECHHHHHHTTCCTTCCEEEESSSCCEEECEEECSSCC-------CCEEEE
T ss_pred EEecCCcceEEECCHHHHHHHHHhhCceEEEEcCCCCEEEEeeeccccCC----CCccHHHH
Confidence 6778899999 665 356789999999999998553211 22556654
No 4
>d2hyma2 b.1.2.1 (A:110-212) Interferon-alpha/beta receptor beta chain {Human (Homo sapiens) [TaxId: 9606]}
Probab=70.34 E-value=1.1 Score=30.64 Aligned_cols=47 Identities=15% Similarity=0.229 Sum_probs=32.7
Q ss_pred EEEEcccceeecccCCceEEEEEEEEeeeccCCceeeCeEEEEEECCce
Q 045613 78 VTGKLPIISSMAALTPKAYEIFYIVKFRVDAFGWHSVPVKFKVRVNGEE 126 (190)
Q Consensus 78 I~G~i~~~~~~l~sp~t~Y~a~~v~kl~~~a~Gw~~~pv~~~~~~~~g~ 126 (190)
++|.+.++-.-| +|+|.|-++.-|.-+|+.- -...|++-++--|+++
T Consensus 53 ~TgNFtyVidkL-iPnTnYCVSvYf~~~d~~~-v~kSPlKCtllqP~qE 99 (103)
T d2hyma2 53 MSGNFTYIIDKL-IPNTNYCVSVYLEHSDEQA-VIKSPLKCTLLPPGQE 99 (103)
T ss_dssp SSSEEEEEEECC-CSSCEEEEEEEEESSSSTT-CCCCCCEEEECCCCCS
T ss_pred cccceEEEhhHh-CCCCceEEEEEEecCCcch-hhcCCceEEEECCCcc
Confidence 567777777767 6999999998888766432 2246777776656543
No 5
>d1fnaa_ b.1.2.1 (A:) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]}
Probab=38.43 E-value=20 Score=21.85 Aligned_cols=30 Identities=13% Similarity=-0.010 Sum_probs=18.7
Q ss_pred cCCceEEEEEEEEeeeccCCceeeCeEEEE
Q 045613 91 LTPKAYEIFYIVKFRVDAFGWHSVPVKFKV 120 (190)
Q Consensus 91 sp~t~Y~a~~v~kl~~~a~Gw~~~pv~~~~ 120 (190)
.|++.|.+.+.-.-..+.......|+.++.
T Consensus 58 ~p~t~Y~~~V~a~~~~g~s~~~s~~v~~~~ 87 (91)
T d1fnaa_ 58 KPGVDYTITVYAVTGRGDSPASSKPISINY 87 (91)
T ss_dssp CTTCEEEEEEEEECTTCCSSCSCCCEEEEE
T ss_pred CCCCEEEEEEEEEeCCccCCCcCCCEEEEE
Confidence 499999988776554443334445665544
No 6
>d2b5ib2 b.1.2.1 (B:104-207) Interleukin-2 receptor beta chain {Human (Homo sapiens) [TaxId: 9606]}
Probab=32.78 E-value=28 Score=21.28 Aligned_cols=29 Identities=31% Similarity=0.493 Sum_probs=19.5
Q ss_pred cCCceEEEEEEEEeeeccCC-ce--eeCeEEE
Q 045613 91 LTPKAYEIFYIVKFRVDAFG-WH--SVPVKFK 119 (190)
Q Consensus 91 sp~t~Y~a~~v~kl~~~a~G-w~--~~pv~~~ 119 (190)
.|+|.|.+-.+.+-..+..| |. +.|++++
T Consensus 70 ~p~t~Y~~rVra~~~~g~~g~wS~wS~~v~~~ 101 (104)
T d2b5ib2 70 TPDTQYEFQVRVKPLQGEFTTWSPWSQPLAFR 101 (104)
T ss_dssp CTTCEEEEEEEEEESCCSSCCCCCCCCCEEEE
T ss_pred CCCCEEEEEEEEEECCCCCCCCCCCcCCEEEE
Confidence 49999999998886554433 22 4666654
No 7
>d2gysa2 b.1.2.1 (A:104-217) Common beta-chain in the GM-CSF, IL-3 and IL-5 receptors {Human (Homo sapiens) [TaxId: 9606]}
Probab=31.92 E-value=27 Score=22.00 Aligned_cols=27 Identities=15% Similarity=0.252 Sum_probs=19.3
Q ss_pred cCCceEEEEEEEEeeecc------CCceeeCeEE
Q 045613 91 LTPKAYEIFYIVKFRVDA------FGWHSVPVKF 118 (190)
Q Consensus 91 sp~t~Y~a~~v~kl~~~a------~Gw~~~pv~~ 118 (190)
.|+|.|.+-++.+...+. +-| +.|+.+
T Consensus 76 ~p~t~Y~~rVRa~~~~g~~~~g~wS~W-S~~v~~ 108 (114)
T d2gysa2 76 MPSSTYVARVRTRLAPGSRLSGRPSKW-SPEVCW 108 (114)
T ss_dssp CTTCEEEEEEEEEECTTSSCCBCCCCC-CCCEEE
T ss_pred CCCcEEEEEEEEEeCCCCCCCCCccCC-cCCEee
Confidence 599999999999876533 235 467665
No 8
>d1x5ja1 b.1.2.1 (A:8-107) Neogenin {Human (Homo sapiens) [TaxId: 9606]}
Probab=27.54 E-value=60 Score=19.49 Aligned_cols=14 Identities=14% Similarity=0.487 Sum_probs=11.6
Q ss_pred eEE-EecccceEEeC
Q 045613 29 LIK-IPVRALNIIWG 42 (190)
Q Consensus 29 ~cy-LsaR~L~I~Wg 42 (190)
.|- +++..+.|+|.
T Consensus 9 ~~~~~s~tsi~v~W~ 23 (100)
T d1x5ja1 9 QASILSHDTIRITWA 23 (100)
T ss_dssp EEEEEETTEEEEEEE
T ss_pred EEEEecCCEEEEEEc
Confidence 456 88999999995
No 9
>d1fnfa2 b.1.2.1 (A:1236-1326) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]}
Probab=24.18 E-value=40 Score=20.15 Aligned_cols=28 Identities=14% Similarity=0.157 Sum_probs=18.4
Q ss_pred cCCceEEEEEEEEeeeccCCceeeCeEEEEEE
Q 045613 91 LTPKAYEIFYIVKFRVDAFGWHSVPVKFKVRV 122 (190)
Q Consensus 91 sp~t~Y~a~~v~kl~~~a~Gw~~~pv~~~~~~ 122 (190)
.|+|.|.+.+.-.- ..|. ..|+..+...
T Consensus 63 ~p~t~Y~~~V~a~~---~~g~-S~p~~~~~~T 90 (91)
T d1fnfa2 63 LPGTEYVVSVSSVY---EQHE-STPLRGRQKT 90 (91)
T ss_dssp CTTCEEEEEEEEEE---TTEE-CCCEEEEEEC
T ss_pred eCCCEEEEEEEEEc---CCCC-CCCEEEEEEC
Confidence 49999987664332 2354 6788877654
No 10
>d1erna2 b.1.2.1 (A:117-221) Erythropoietin (EPO) receptor {Human (Homo sapiens) [TaxId: 9606]}
Probab=23.52 E-value=49 Score=20.38 Aligned_cols=27 Identities=22% Similarity=0.440 Sum_probs=19.0
Q ss_pred cCCceEEEEEEEEeeeccC-----CceeeCeEE
Q 045613 91 LTPKAYEIFYIVKFRVDAF-----GWHSVPVKF 118 (190)
Q Consensus 91 sp~t~Y~a~~v~kl~~~a~-----Gw~~~pv~~ 118 (190)
.|+|.|.+-.+.+.....+ -| +.|+.+
T Consensus 71 ~p~t~Y~~rVRar~~~~~~~G~WSeW-S~~v~~ 102 (105)
T d1erna2 71 RGRTRYTFAVRARMAEPSFGGFWSAW-SEPVSL 102 (105)
T ss_dssp CSSCEEEEEEEEEECSSSCCBCCCCC-CCCEEE
T ss_pred CCCcEEEEEEEEEECCCCCCCCCCCC-CCCEEe
Confidence 4999999999999854332 35 466654
No 11
>d3d48r2 b.1.2.1 (R:101-204) Prolactin receptor {Human (Homo sapiens) [TaxId: 9606]}
Probab=23.30 E-value=42 Score=20.33 Aligned_cols=27 Identities=15% Similarity=0.064 Sum_probs=16.9
Q ss_pred cCCceEEEEEEEEeeecc-CCceeeCeEE
Q 045613 91 LTPKAYEIFYIVKFRVDA-FGWHSVPVKF 118 (190)
Q Consensus 91 sp~t~Y~a~~v~kl~~~a-~Gw~~~pv~~ 118 (190)
.|+|.|.+-+.-+-..+. .-| +.++.+
T Consensus 73 ~p~t~Y~~rVrA~n~~G~ws~w-S~~~~v 100 (104)
T d3d48r2 73 HPGQKYLVQVRCKPDHGYWSAW-SPATFI 100 (104)
T ss_dssp -CCCEEEEEEEEEESSSCCCCC-CCCEEE
T ss_pred CCCCEEEEEEEEEeCCCCCCCC-cCCEEE
Confidence 499999988877764433 225 455544
No 12
>d2d9qb2 b.1.2.1 (B:204-308) Granulocyte colony-stimulating factor (GC-SF) receptor {Human (Homo sapiens) [TaxId: 9606]}
Probab=22.89 E-value=39 Score=20.97 Aligned_cols=17 Identities=18% Similarity=-0.017 Sum_probs=13.0
Q ss_pred cCCceEEEEEEEEeeec
Q 045613 91 LTPKAYEIFYIVKFRVD 107 (190)
Q Consensus 91 sp~t~Y~a~~v~kl~~~ 107 (190)
.|+|.|.+-++..-..+
T Consensus 72 ~p~t~Y~frVra~n~~g 88 (105)
T d2d9qb2 72 LPATAYTLQIRCIRWPL 88 (105)
T ss_dssp CSCCCEEEEEEEEECSS
T ss_pred cCCeEEEEEEEEEeCCC
Confidence 49999998888765443
No 13
>d1fnha2 b.1.2.1 (A:93-182) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]}
Probab=21.74 E-value=47 Score=19.95 Aligned_cols=28 Identities=18% Similarity=0.196 Sum_probs=18.7
Q ss_pred cCCceEEEEEEEEeeeccCCceeeCeEEEEEE
Q 045613 91 LTPKAYEIFYIVKFRVDAFGWHSVPVKFKVRV 122 (190)
Q Consensus 91 sp~t~Y~a~~v~kl~~~a~Gw~~~pv~~~~~~ 122 (190)
.|||.|.+.+.-.- ..|. ..|+.+++..
T Consensus 62 ~p~t~Y~~~V~a~~---~~g~-s~p~~~~~~T 89 (90)
T d1fnha2 62 QPGTDYKIYLYTLN---DNAR-SSPVVIDAST 89 (90)
T ss_dssp CTTCEEEEEEEEEE---TTEE-CCCEEEEEEC
T ss_pred CCCcEEEEEEEEEe---CCCC-cCCEEEEEEC
Confidence 49999998855533 2355 5788777653
No 14
>d1qr4a1 b.1.2.1 (A:1-87) Tenascin {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=21.03 E-value=51 Score=19.56 Aligned_cols=27 Identities=19% Similarity=0.063 Sum_probs=17.7
Q ss_pred cCCceEEEEEEEEeeeccCCceeeCeEEEEE
Q 045613 91 LTPKAYEIFYIVKFRVDAFGWHSVPVKFKVR 121 (190)
Q Consensus 91 sp~t~Y~a~~v~kl~~~a~Gw~~~pv~~~~~ 121 (190)
.|++.|.+.+.-.-. .|- ..|+..++.
T Consensus 59 ~p~t~Y~v~V~a~~~---~~~-s~~~~~~~~ 85 (87)
T d1qr4a1 59 DAGTEYTISLVAEKG---RHK-SKPTTIKGS 85 (87)
T ss_dssp CSSCEEEEEEEEESS---SCB-CCCEEEEEE
T ss_pred CcCCEEEEEEEEEcC---CCC-ccCEEEEEE
Confidence 499999988766433 243 567766554
No 15
>d1fnha3 b.1.2.1 (A:183-271) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]}
Probab=20.66 E-value=50 Score=19.61 Aligned_cols=27 Identities=19% Similarity=0.153 Sum_probs=17.9
Q ss_pred cCCceEEEEEEEEeeeccCCceeeCeEEEEE
Q 045613 91 LTPKAYEIFYIVKFRVDAFGWHSVPVKFKVR 121 (190)
Q Consensus 91 sp~t~Y~a~~v~kl~~~a~Gw~~~pv~~~~~ 121 (190)
.|++.|.+.+.-. +..|- ..|+..+++
T Consensus 62 ~p~t~Y~~~V~a~---n~~g~-S~p~~~~~~ 88 (89)
T d1fnha3 62 EPGTEYTIYVIAL---KNNQK-SEPLIGRKK 88 (89)
T ss_dssp CTTCEEEEEEEEE---SSSCE-EEEEEEEEE
T ss_pred eCCCEEEEEEEEE---cCCCE-eCCEEEEEE
Confidence 5999999766432 33465 678776654
Done!