BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>045614
MIYLLFKIVFTEMALILTLLFRNPLRKFVIMGLDRLKRGRGPLVAKSVGATVLVVLCSAV
YSAMEIQRRAREGGAINPTEEVLMANLLLQASLMGFSLFLAMITDRLHYYIKELHLVRQT
LEG

High Scoring Gene Products

Symbol, full name Information P value
AT5G42570 protein from Arabidopsis thaliana 4.4e-36
AT1G11905 protein from Arabidopsis thaliana 7.1e-29
AT3G20450 protein from Arabidopsis thaliana 3.2e-26
AT5G48660 protein from Arabidopsis thaliana 3.5e-20
AT3G07190 protein from Arabidopsis thaliana 2.2e-18

Back to top

Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  045614
        (123 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2152691 - symbol:AT5G42570 "AT5G42570" species...   389  4.4e-36   1
TAIR|locus:1005716776 - symbol:AT1G11905 "AT1G11905" spec...   321  7.1e-29   1
TAIR|locus:2092364 - symbol:AT3G20450 "AT3G20450" species...   296  3.2e-26   1
TAIR|locus:2152501 - symbol:AT5G48660 "AT5G48660" species...   239  3.5e-20   1
TAIR|locus:2098520 - symbol:AT3G07190 "AT3G07190" species...   222  2.2e-18   1


>TAIR|locus:2152691 [details] [associations]
            symbol:AT5G42570 "AT5G42570" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005783
            "endoplasmic reticulum" evidence=IEA;IDA] [GO:0006886
            "intracellular protein transport" evidence=IEA] [GO:0009507
            "chloroplast" evidence=ISM] [GO:0016021 "integral to membrane"
            evidence=IEA] [GO:0005774 "vacuolar membrane" evidence=IDA]
            [GO:0009506 "plasmodesma" evidence=IDA] InterPro:IPR008417
            Pfam:PF05529 GO:GO:0005783 GO:GO:0016021 GO:GO:0009506
            GO:GO:0005774 EMBL:CP002688 GO:GO:0006886 PANTHER:PTHR12701
            KO:K14009 EMBL:AY054493 EMBL:BT024606 IPI:IPI00524282
            RefSeq:NP_568607.1 UniGene:At.26944 ProteinModelPortal:Q93XZ7
            PRIDE:Q93XZ7 EnsemblPlants:AT5G42570.1 GeneID:834264
            KEGG:ath:AT5G42570 TAIR:At5g42570 InParanoid:Q93XZ7 OMA:DNQNLRN
            PhylomeDB:Q93XZ7 ProtClustDB:CLSN2917731 Genevestigator:Q93XZ7
            Uniprot:Q93XZ7
        Length = 218

 Score = 389 (142.0 bits), Expect = 4.4e-36, P = 4.4e-36
 Identities = 71/122 (58%), Positives = 100/122 (81%)

Query:     1 MIYLLFKIVFTEMALILTLLFRNPLRKFVIMGLDRLKRGRGPLVAKSVGATVLVVLCSAV 60
             MI+LL+ ++F EMALIL LLF+ PLRK +I+  DR+KRGRGP+V K++G TV VVL S++
Sbjct:     1 MIHLLYTVIFAEMALILLLLFKTPLRKLIILTFDRIKRGRGPVVVKTIGTTVFVVLLSSI 60

Query:    61 YSAMEIQRRAREGGAINPTEEVLMANLLLQASLMGFSLFLAMITDRLHYYIKELHLVRQT 120
             YS + IQRR+ +G  +NPT++VL +  LL+ASLMGF LFL+++ DRLH+YI+EL L+R+T
Sbjct:    61 YSLVNIQRRSEDGAVLNPTDQVLASKHLLEASLMGFVLFLSLMIDRLHHYIRELRLLRKT 120

Query:   121 LE 122
             +E
Sbjct:   121 ME 122


>TAIR|locus:1005716776 [details] [associations]
            symbol:AT1G11905 "AT1G11905" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005737
            "cytoplasm" evidence=ISM] [GO:0005783 "endoplasmic reticulum"
            evidence=IEA;IDA] [GO:0006886 "intracellular protein transport"
            evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
            InterPro:IPR008417 Pfam:PF05529 GO:GO:0005783 GO:GO:0016021
            EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0006886
            PANTHER:PTHR12701 KO:K14009 EMBL:AY140048 IPI:IPI00944274
            RefSeq:NP_849648.4 UniGene:At.45890 ProteinModelPortal:Q8L702
            SMR:Q8L702 PRIDE:Q8L702 EnsemblPlants:AT1G11905.1 GeneID:837739
            KEGG:ath:AT1G11905 TAIR:At1g11905 HOGENOM:HOG000239029 OMA:DEVIMAK
            PhylomeDB:Q8L702 ProtClustDB:CLSN2723326 Genevestigator:Q8L702
            Uniprot:Q8L702
        Length = 221

 Score = 321 (118.1 bits), Expect = 7.1e-29, P = 7.1e-29
 Identities = 62/122 (50%), Positives = 92/122 (75%)

Query:     1 MIYLLFKIVFTEMALILTLLFRNPLRKFVIMGLDRLKRGRGPLVAKSVGATVLVVLCSAV 60
             M  LLF +V  E+ +I+ L F+ P+RK +IM LDR KRGRGP+V ++V ATV+V+L ++V
Sbjct:     1 MQQLLFAVVLFEVVVIMALSFKTPIRKLLIMSLDRSKRGRGPVVIQTVSATVIVLLVTSV 60

Query:    61 YSAMEIQRRAREGGAINPTEEVLMANLLLQASLMGFSLFLAMITDRLHYYIKELHLVRQT 120
             Y+ M IQ+R  E G +NPT+EV+MA  LL+++LMG  LFL ++ DRLH+Y++EL + R+ 
Sbjct:    61 YNMMGIQKRWIEDGVVNPTDEVIMAKHLLESTLMGGFLFLGLMIDRLHHYMRELRIRRKN 120

Query:   121 LE 122
             +E
Sbjct:   121 ME 122


>TAIR|locus:2092364 [details] [associations]
            symbol:AT3G20450 "AT3G20450" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005783
            "endoplasmic reticulum" evidence=IEA] [GO:0006886 "intracellular
            protein transport" evidence=IEA] [GO:0016021 "integral to membrane"
            evidence=IEA] InterPro:IPR008417 GO:GO:0005783 GO:GO:0016021
            EMBL:CP002686 GO:GO:0006886 PANTHER:PTHR12701 KO:K14009
            EMBL:AB024036 HOGENOM:HOG000239029 EMBL:BT024796 EMBL:AK175433
            IPI:IPI00532237 RefSeq:NP_566662.1 UniGene:At.38237
            EnsemblPlants:AT3G20450.1 GeneID:821590 KEGG:ath:AT3G20450
            TAIR:At3g20450 InParanoid:Q9LTP7 OMA:SLFLAMM PhylomeDB:Q9LTP7
            ProtClustDB:CLSN2688597 Genevestigator:Q9LTP7 Uniprot:Q9LTP7
        Length = 137

 Score = 296 (109.3 bits), Expect = 3.2e-26, P = 3.2e-26
 Identities = 64/123 (52%), Positives = 83/123 (67%)

Query:     1 MIYLLFKIVFTEMALILTLLFRNPLRKFVIMGLDRLKRGRGPLVAKSVGATVLVVLCSAV 60
             M  LLF IV  E  LILTL F  P R+ V+  LD  K+GR PLVAK+V AT+LV+  S +
Sbjct:     5 MFQLLFTIVTIEAVLILTLGFGTPARRVVVKLLDLSKQGRAPLVAKTVAATMLVLFGSVM 64

Query:    61 YSAMEIQRRARE-GGAINPTEEVLMANLLLQASLMGFSLFLAMITDRLHYYIKELHLVRQ 119
             +S ++I  R  E GG  N T++V+ AN LL+A LMG  LFLAM+ DR+HYY +EL + R+
Sbjct:    65 FSTIQIHTRVSESGGVANSTDQVMFANRLLEAFLMGTVLFLAMVIDRMHYYTRELQITRR 124

Query:   120 TLE 122
              LE
Sbjct:   125 NLE 127


>TAIR|locus:2152501 [details] [associations]
            symbol:AT5G48660 "AT5G48660" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005783
            "endoplasmic reticulum" evidence=IEA] [GO:0006886 "intracellular
            protein transport" evidence=IEA] [GO:0009507 "chloroplast"
            evidence=ISM] [GO:0016021 "integral to membrane" evidence=IEA]
            InterPro:IPR008417 Pfam:PF05529 GO:GO:0005783 GO:GO:0016021
            EMBL:CP002688 GO:GO:0006886 EMBL:AB015468 PANTHER:PTHR12701
            KO:K14009 HOGENOM:HOG000239029 EMBL:AY954876 EMBL:DQ132749
            IPI:IPI00539904 RefSeq:NP_199677.1 UniGene:At.55437
            ProteinModelPortal:Q9FJK4 SMR:Q9FJK4 PRIDE:Q9FJK4
            EnsemblPlants:AT5G48660.1 GeneID:834924 KEGG:ath:AT5G48660
            TAIR:At5g48660 InParanoid:Q9FJK4 OMA:FIIDRMH PhylomeDB:Q9FJK4
            ProtClustDB:CLSN2684824 Genevestigator:Q9FJK4 Uniprot:Q9FJK4
        Length = 219

 Score = 239 (89.2 bits), Expect = 3.5e-20, P = 3.5e-20
 Identities = 49/122 (40%), Positives = 79/122 (64%)

Query:     1 MIYLLFKIVFTEMALILTLLFR-NPLRKFVIMGLDRLKRGRGPLVAKSVGATVLVVLCSA 59
             MI LLF ++F E A+   LL +  PLR+ VI  LD++K G+GP   K++  T+ V+L S 
Sbjct:     1 MIQLLFLVLFVEGAIAFLLLIKIGPLRELVIKSLDQMKMGKGPATVKTIAGTMSVILFSN 60

Query:    60 VYSAMEIQRRAREGGAINPTEEVLMANLLLQASLMGFSLFLAMITDRLHYYIKELHLVRQ 119
             + S ++IQ +  + G ++P ++VL    LL+ASL+G  LFL  I DR+H+Y+++L  +R 
Sbjct:    61 LMSIVKIQNKGAKLGTMSPMDQVLWRTHLLEASLLGVVLFLGFIIDRMHHYLRKLINLRS 120

Query:   120 TL 121
              +
Sbjct:   121 NV 122


>TAIR|locus:2098520 [details] [associations]
            symbol:AT3G07190 "AT3G07190" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005783
            "endoplasmic reticulum" evidence=IEA] [GO:0006886 "intracellular
            protein transport" evidence=IEA] [GO:0009507 "chloroplast"
            evidence=ISM] [GO:0016021 "integral to membrane" evidence=IEA]
            InterPro:IPR008417 Pfam:PF05529 GO:GO:0005783 GO:GO:0016021
            EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0006886
            PANTHER:PTHR12701 KO:K14009 EMBL:AC012395 HOGENOM:HOG000239029
            ProtClustDB:CLSN2684824 EMBL:BT014780 EMBL:BT044608 IPI:IPI00526650
            RefSeq:NP_187375.1 UniGene:At.27635 ProteinModelPortal:Q9SFU9
            PaxDb:Q9SFU9 PRIDE:Q9SFU9 EnsemblPlants:AT3G07190.1 GeneID:819906
            KEGG:ath:AT3G07190 TAIR:At3g07190 eggNOG:NOG326792
            InParanoid:Q9SFU9 OMA:THHYLEK PhylomeDB:Q9SFU9
            Genevestigator:Q9SFU9 Uniprot:Q9SFU9
        Length = 220

 Score = 222 (83.2 bits), Expect = 2.2e-18, P = 2.2e-18
 Identities = 47/122 (38%), Positives = 76/122 (62%)

Query:     1 MIYLLFKIVFTEMALILTLLFR-NPLRKFVIMGLDRLKRGRGPLVAKSVGATVLVVLCSA 59
             MI LLF ++F E A+   LL +  PLR+ V+  LD+LK G+ P   K++  T+ V+L S 
Sbjct:     1 MIQLLFLVLFVEGAIAFLLLVKIGPLRELVMKSLDQLKLGKRPATLKTIAGTMSVILLSN 60

Query:    60 VYSAMEIQRRAREGGAINPTEEVLMANLLLQASLMGFSLFLAMITDRLHYYIKELHLVRQ 119
             + + ++IQ +  + G ++P ++VL    LL+ASLMG  LF   I DR H+Y+++L  +R 
Sbjct:    61 LMNIIKIQNKGAKLGTMSPMDQVLWRTHLLEASLMGVVLFFGFIIDRTHHYLEKLITLRS 120

Query:   120 TL 121
              +
Sbjct:   121 NV 122


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.331   0.144   0.402    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      123       123   0.00091  102 3  11 21  0.38    30
                                                     29  0.50    32


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  5
  No. of states in DFA:  467 (50 KB)
  Total size of DFA:  87 KB (2067 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  10.90u 0.15s 11.05t   Elapsed:  00:00:01
  Total cpu time:  10.90u 0.15s 11.05t   Elapsed:  00:00:01
  Start:  Tue May 21 02:30:43 2013   End:  Tue May 21 02:30:44 2013

Back to top