Query 045614
Match_columns 123
No_of_seqs 39 out of 41
Neff 2.5
Searched_HMMs 13730
Date Mon Mar 25 06:06:01 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/045614.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/045614hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1r7aa2 c.1.8.1 (A:1-434) Sucr 41.6 6.6 0.00048 26.0 2.1 18 105-122 417-434 (434)
2 d1rfma_ c.122.1.1 (A:) L-sulfo 39.9 6.2 0.00045 30.0 2.0 38 76-116 21-58 (344)
3 d1jnra3 d.168.1.1 (A:257-401) 35.2 10 0.00075 26.7 2.4 27 23-51 58-84 (145)
4 d2bykb1 a.22.1.3 (B:11-99) Chr 27.5 48 0.0035 20.0 4.4 54 47-110 28-82 (89)
5 d1xrha_ c.122.1.1 (A:) Ureidog 26.8 13 0.00092 28.3 1.8 38 76-116 22-59 (343)
6 d1oede_ f.36.1.1 (E:) Acetylch 24.2 28 0.002 23.5 3.1 44 42-85 63-108 (260)
7 d1nxua_ c.122.1.1 (A:) 2,3-dik 23.7 13 0.00092 28.1 1.2 38 76-116 21-58 (332)
8 d1r5ya_ c.1.20.1 (A:) Queosine 23.2 44 0.0032 25.2 4.3 36 85-123 321-357 (372)
9 d3pmga3 c.84.1.1 (A:304-420) P 21.2 26 0.0019 22.1 2.3 31 23-54 1-37 (117)
10 d1m7xa3 c.1.8.1 (A:227-622) 1, 19.2 26 0.0019 23.2 2.0 14 107-120 373-386 (396)
No 1
>d1r7aa2 c.1.8.1 (A:1-434) Sucrose phosphorylase {Bifidobacterium adolescentis [TaxId: 1680]}
Probab=41.58 E-value=6.6 Score=26.02 Aligned_cols=18 Identities=17% Similarity=0.207 Sum_probs=15.2
Q ss_pred HHHHHHHHHHHHHHhhhc
Q 045614 105 DRLHYYIKELHLVRQTLE 122 (123)
Q Consensus 105 DRlHhYireLr~lrk~mE 122 (123)
+.+.+|+++|..+||.++
T Consensus 417 ~~l~~~~k~Li~lR~~~~ 434 (434)
T d1r7aa2 417 RPVVKALNALAKFRNELD 434 (434)
T ss_dssp SHHHHHHHHHHHHHHHCG
T ss_pred cHHHHHHHHHHHHHHhcC
Confidence 457899999999999864
No 2
>d1rfma_ c.122.1.1 (A:) L-sulfolactate dehydrogenase {Archaeon Methanococcus jannaschii [TaxId: 2190]}
Probab=39.91 E-value=6.2 Score=29.97 Aligned_cols=38 Identities=26% Similarity=0.489 Sum_probs=32.6
Q ss_pred CCchHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 045614 76 INPTEEVLMANLLLQASLMGFSLFLAMITDRLHYYIKELHL 116 (123)
Q Consensus 76 ~nptDqVL~a~hLLEAsLmG~~LFLal~IDRlHhYireLr~ 116 (123)
+++.|--..|+||++|.|.|.. +-=+-|+.+|++.|+.
T Consensus 21 ~~~~~A~~vA~~lv~adl~G~~---SHG~~rl~~Y~~~l~~ 58 (344)
T d1rfma_ 21 VPEEDAKITADVFVDADLKGFT---SHGIGRFPQYITALKL 58 (344)
T ss_dssp CCHHHHHHHHHHHHHHHHHTCG---GGSGGGHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHcCCCc---cccHHHHHHHHHHHHc
Confidence 7899999999999999999965 4455699999999875
No 3
>d1jnra3 d.168.1.1 (A:257-401) Adenylylsulfate reductase A subunit {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}
Probab=35.17 E-value=10 Score=26.67 Aligned_cols=27 Identities=22% Similarity=0.426 Sum_probs=21.5
Q ss_pred chhHHHHHHHhhhhccCCCceeeeehhhH
Q 045614 23 NPLRKFVIMGLDRLKRGRGPLVAKSVGAT 51 (123)
Q Consensus 23 tPlRkLvi~~lD~~KrGrGP~~vKTva~T 51 (123)
||+|.-+. +.-.|.||||+-.+|--++
T Consensus 58 T~lRn~~~--~~E~~~GrGPiym~T~~a~ 84 (145)
T d1jnra3 58 TPLRNHQV--MLEIMDGNQPIYMHTEEAL 84 (145)
T ss_dssp HHHHHHHH--HHHHHTTCCCEEECHHHHH
T ss_pred hHHHHHHH--HHHHhcCCCCeEEehHHHH
Confidence 57777654 5678999999999997654
No 4
>d2bykb1 a.22.1.3 (B:11-99) Chrac-14 {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=27.47 E-value=48 Score=20.02 Aligned_cols=54 Identities=19% Similarity=0.354 Sum_probs=33.2
Q ss_pred ehhhHHHHHHHHH-HHHHHHHHhhhccCCCCCchHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHH
Q 045614 47 SVGATVLVVLCSA-VYSAMEIQRRAREGGAINPTEEVLMANLLLQASLMGFSLFLAMITDRLHYY 110 (123)
Q Consensus 47 Tva~TvlVvl~Ss-~ySi~kIq~R~~~~g~~nptDqVL~a~hLLEAsLmG~~LFLal~IDRlHhY 110 (123)
+-|+++++-..|+ -+.+.+-++| -+++|.| |+-|- .-+||--|+--+-+.+|+|
T Consensus 28 ~~aae~FI~~lt~~A~~~a~~~~r----KtI~~~d-v~~Al-----~~~~f~~~~~~l~~~l~~~ 82 (89)
T d2bykb1 28 ARAASVFAIFVTSSSTALAHKQNH----KTITAKD-ILQTL-----TELDFESFVPSLTQDLEVY 82 (89)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTC----SSCCHHH-HHHHH-----HHTTCTTTHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCC----CccCHHH-HHHHH-----HHCCcHHHHHHHHHHHHHH
Confidence 4466777766655 3344444444 3889887 33332 2367777777777788887
No 5
>d1xrha_ c.122.1.1 (A:) Ureidoglycolate dehydrogenase AllD {Escherichia coli [TaxId: 562]}
Probab=26.82 E-value=13 Score=28.26 Aligned_cols=38 Identities=18% Similarity=0.324 Sum_probs=31.6
Q ss_pred CCchHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 045614 76 INPTEEVLMANLLLQASLMGFSLFLAMITDRLHYYIKELHL 116 (123)
Q Consensus 76 ~nptDqVL~a~hLLEAsLmG~~LFLal~IDRlHhYireLr~ 116 (123)
+++.|--..|.||.||.|.|.. +==+.|+.+|++.|+.
T Consensus 22 ~~~~~A~~vA~~Lv~Adl~G~~---SHGl~rl~~Y~~~l~~ 59 (343)
T d1xrha_ 22 LKREHAATVAEVLVYADARGIH---SHGAVRVEYYAERISK 59 (343)
T ss_dssp CCHHHHHHHHHHHHHHHHTTCG---GGTGGGHHHHHHHHHT
T ss_pred CCHHHHHHHHHHHHHHHcCCCc---CCcHHHHHHHHHHHHc
Confidence 6888999999999999999973 2345699999998864
No 6
>d1oede_ f.36.1.1 (E:) Acetylcholine receptor protein, gamma chain {Marbled electric ray (Torpedo marmorata) [TaxId: 7788]}
Probab=24.20 E-value=28 Score=23.52 Aligned_cols=44 Identities=14% Similarity=0.230 Sum_probs=25.2
Q ss_pred ceeeeehhhHHHHHHHHHHHHHH--HHHhhhccCCCCCchHHHHHH
Q 045614 42 PLVAKSVGATVLVVLCSAVYSAM--EIQRRAREGGAINPTEEVLMA 85 (123)
Q Consensus 42 P~~vKTva~TvlVvl~Ss~ySi~--kIq~R~~~~g~~nptDqVL~a 85 (123)
|++.+-.++++..+.+|.+-++. +++.|+.+...+.+..+.++-
T Consensus 63 Pli~~~~~~~~~~v~~sl~~t~iVl~~~~~~~~~~~~p~~~r~~~l 108 (260)
T d1oede_ 63 PLIGKYLIFVMFVSMLIVMNCVIVLNVSLRTPNTHSLSEKIKHLFL 108 (260)
T ss_dssp CCCCSHHHHHHHHHHHHHHHHHHHHHHHHHC---------------
T ss_pred cHHHHHHHHHHHHHHHHHHHHHheeeEEccCCCCCCCcchhHHHHh
Confidence 89999999999999999887765 688887766555555554443
No 7
>d1nxua_ c.122.1.1 (A:) 2,3-diketogulonate oxidoreductase (YiaK) {Escherichia coli [TaxId: 562]}
Probab=23.71 E-value=13 Score=28.14 Aligned_cols=38 Identities=13% Similarity=0.235 Sum_probs=31.2
Q ss_pred CCchHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 045614 76 INPTEEVLMANLLLQASLMGFSLFLAMITDRLHYYIKELHL 116 (123)
Q Consensus 76 ~nptDqVL~a~hLLEAsLmG~~LFLal~IDRlHhYireLr~ 116 (123)
+++.|--..|.||.+|.+.|.. +-=+-|+.+|++.++.
T Consensus 21 ~~~~~A~~~A~~Lv~Adl~G~~---sHGl~rl~~Y~~~l~~ 58 (332)
T d1nxua_ 21 VDSETADACAEMFARTTESGVY---SHGVNRFPRFIQQLEN 58 (332)
T ss_dssp CCHHHHHHHHHHHHHHHHTTCC---TTTGGGHHHHHHHHHT
T ss_pred CCHHHHHHHHHHHHHHHcCCcc---cccHHHHHHHHHHHHc
Confidence 6888888999999999999974 3334589999998864
No 8
>d1r5ya_ c.1.20.1 (A:) Queosine tRNA-guanine transglycosylase {Zymomonas mobilis [TaxId: 542]}
Probab=23.22 E-value=44 Score=25.20 Aligned_cols=36 Identities=19% Similarity=0.486 Sum_probs=28.8
Q ss_pred HHhHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHhhhcC
Q 045614 85 ANLLLQAS-LMGFSLFLAMITDRLHYYIKELHLVRQTLEG 123 (123)
Q Consensus 85 a~hLLEAs-LmG~~LFLal~IDRlHhYireLr~lrk~mE~ 123 (123)
-+||+.|- ..|..| +.|-=+|||.++++..|+++++
T Consensus 321 l~HL~~~~E~l~~~L---l~iHNl~~~~~~~~~iR~aI~~ 357 (372)
T d1r5ya_ 321 IHHLIRAGEILGAML---MTEHNIAFYQQLMQKIRDSISE 357 (372)
T ss_dssp HHHHHHTTCHHHHHH---HHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHhhCCchHHHHH---HHHHHHHHHHHHHHHHHHHHHc
Confidence 46888775 556665 6789999999999999998753
No 9
>d3pmga3 c.84.1.1 (A:304-420) Phosphoglucomutase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}
Probab=21.19 E-value=26 Score=22.10 Aligned_cols=31 Identities=16% Similarity=0.244 Sum_probs=19.1
Q ss_pred chhHHHHHHHhhh------hccCCCceeeeehhhHHHH
Q 045614 23 NPLRKFVIMGLDR------LKRGRGPLVAKSVGATVLV 54 (123)
Q Consensus 23 tPlRkLvi~~lD~------~KrGrGP~~vKTva~TvlV 54 (123)
+|=..+.+++-.. -|+|-.+ |||||+++-.+
T Consensus 1 np~d~lavl~~~~~l~~~~~k~g~~~-Vv~tv~tS~~l 37 (117)
T d3pmga3 1 NPSDSVAVIAANIFSIPYFQQTGVRG-FARSMPTSGAL 37 (117)
T ss_dssp CHHHHHHHHHHTGGGSHHHHHHCCCC-EEEETTSCTHH
T ss_pred CchHHHHHHHHHHHHCHHHHhCCCCC-CeeEecCCHHH
Confidence 3555566655443 2456544 78999988765
No 10
>d1m7xa3 c.1.8.1 (A:227-622) 1,4-alpha-glucan branching enzyme, central domain {Escherichia coli [TaxId: 562]}
Probab=19.20 E-value=26 Score=23.21 Aligned_cols=14 Identities=14% Similarity=0.437 Sum_probs=12.9
Q ss_pred HHHHHHHHHHHHhh
Q 045614 107 LHYYIKELHLVRQT 120 (123)
Q Consensus 107 lHhYireLr~lrk~ 120 (123)
++.|+|+|..+||+
T Consensus 373 l~~~~~~L~~lR~~ 386 (396)
T d1m7xa3 373 VQRLVRDLNLTYRH 386 (396)
T ss_dssp HHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHc
Confidence 78899999999987
Done!