BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 045624
(422 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2HI4|A Chain A, Crystal Structure Of Human Microsomal P450 1a2 In Complex
With Alpha-Naphthoflavone
Length = 495
Score = 131 bits (329), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 100/390 (25%), Positives = 164/390 (42%), Gaps = 18/390 (4%)
Query: 42 IIGHMHLLGPVLPKAFHNLSTRNGPLVHFFIGSKPCVLASSPEMAKEFLKTNESIFMNRP 101
++GH+ LG A +S R G ++ IGS P ++ S + ++ L F RP
Sbjct: 26 LLGHVLTLGKNPHLALSRMSQRYGDVLQIRIGSTPVLVLSRLDTIRQALVRQGDDFKGRP 85
Query: 102 KTANLDYITYGSSDFATVHYGPYWKFIKKLCMTEL----LGGRTLDQLRPIREEETKRFL 157
IT G S + GP W ++L L + EE +
Sbjct: 86 DLYTSTLITDGQSLTFSTDSGPVWAARRRLAQNALNTFSIASDPASSSSCYLEEHVSKEA 145
Query: 158 RLMLKKAE--LGEAVNFG--GELMRLTNNVISRMTLGQRCSDSEDEAGEVRKLVKELNVL 213
+ ++ + + + +F +++ NVI M GQ +S DE + K E
Sbjct: 146 KALISRLQELMAGPGHFDPYNQVVVSVANVIGAMCFGQHFPESSDEMLSLVKNTHEFVET 205
Query: 214 GAKFNLSDTIWLFKNFDXXXXXXXXXXDARDRYDVMMERIIKEHEDERMKRKESGDGEGE 273
+ N D + + + R+ +++ ++EH + + D G
Sbjct: 206 ASSGNPLDFFPILRYLPNPALQRFKAFN--QRFLWFLQKTVQEHYQD-FDKNSVRDITGA 262
Query: 274 IVKXXXXXXXXXXXXXNAEMRLTRENIKAFVMNIFGAGTDTSSITVEWGLAELINKPEVM 333
+ K + +E I V +IFGAG DT + + W L L+ KPE+
Sbjct: 263 LFKHSKKGPRASGNL------IPQEKIVNLVNDIFGAGFDTVTTAISWSLMYLVTKPEIQ 316
Query: 334 EKARQEIDSVVGKSRIVEESDIPSLPYMQAVVKEILRLHPTGPLVVRES-SEDCTIADYR 392
K ++E+D+V+G+ R SD P LPY++A + E R P + S + D T+ +
Sbjct: 317 RKIQKELDTVIGRERRPRLSDRPQLPYLEAFILETFRHSSFLPFTIPHSTTRDTTLNGFY 376
Query: 393 IPAKTRLFVNLWSLGRDPNHWENPLEFRPE 422
IP K +FVN W + DP WE+P EFRPE
Sbjct: 377 IPKKCCVFVNQWQVNHDPELWEDPSEFRPE 406
>pdb|4I8V|A Chain A, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|B Chain B, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|C Chain C, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|D Chain D, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
Length = 491
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 101/392 (25%), Positives = 163/392 (41%), Gaps = 20/392 (5%)
Query: 42 IIGHMHLLGPVLPKAFHNLSTRNGPLVHFFIGSKPCVLASSPEMAKEFLKTNESIFMNRP 101
+IGHM LG A +S + G ++ IGS P V+ S + ++ L F RP
Sbjct: 21 LIGHMLTLGKNPHLALSRMSQQYGDVLQIRIGSTPVVVLSGLDTIRQALVRQGDDFKGRP 80
Query: 102 KTANLDYITYGSSDFATVHYGPYWKFIKKLCMTEL----LGGRTLDQLRPIREEETKRFL 157
I+ G S + GP W ++L L + EE +
Sbjct: 81 DLYTFTLISNGQSMSFSPDSGPVWAARRRLAQNGLKSFSIASDPASSTSCYLEEHVSKEA 140
Query: 158 RLMLKKAELGEAVNFGGE------LMRLTNNVISRMTLGQRCSDSEDEAGEVRKLVKELN 211
+++ + L E + G ++ NVI + G+R + E + L
Sbjct: 141 EVLI--STLQELMAGPGHFNPYRYVVVSVTNVICAICFGRRYDHNHQELLSLVNLNNNFG 198
Query: 212 VLGAKFNLSDTIWLFKNFDXXXXXXXXXXDARDRYDVMMERIIKEHEDERMKRKESGDGE 271
+ N +D I + + D +++ M++++KEH K E G
Sbjct: 199 EVVGSGNPADFIPILRYLP--NPSLNAFKDLNEKFYSFMQKMVKEH----YKTFEKGHIR 252
Query: 272 GEIVKXXXXXXXXXXXXXNAEMRLTRENIKAFVMNIFGAGTDTSSITVEWGLAELINKPE 331
+I NA ++L+ E I V+++FGAG DT + + W L L+ P
Sbjct: 253 -DITDSLIEHCQEKQLDENANVQLSDEKIINIVLDLFGAGFDTVTTAISWSLMYLVMNPR 311
Query: 332 VMEKARQEIDSVVGKSRIVEESDIPSLPYMQAVVKEILRLHPTGPLVVRES-SEDCTIAD 390
V K ++E+D+V+G+SR SD LPYM+A + E R P + S + D ++
Sbjct: 312 VQRKIQEELDTVIGRSRRPRLSDRSHLPYMEAFILETFRHSSFVPFTIPHSTTRDTSLKG 371
Query: 391 YRIPAKTRLFVNLWSLGRDPNHWENPLEFRPE 422
+ IP +FVN W + D W NP EF PE
Sbjct: 372 FYIPKGRCVFVNQWQINHDQKLWVNPSEFLPE 403
>pdb|3RUK|A Chain A, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|B Chain B, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|C Chain C, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|D Chain D, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3SWZ|A Chain A, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|B Chain B, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|C Chain C, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|D Chain D, Human Cytochrome P450 17a1 In Complex With Tok-001
Length = 494
Score = 119 bits (299), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 92/381 (24%), Positives = 168/381 (44%), Gaps = 14/381 (3%)
Query: 44 GHMHLLGPVLPKAFHNLSTRNGPLVHFFIGSKPCVLASSPEMAKEFLKTNESIFMNRPKT 103
GHMH F L + GP+ +G+K V+ ++AKE L F RP+
Sbjct: 29 GHMH-------NNFFKLQKKYGPIYSVRMGTKTTVIVGHHQLAKEVLIKKGKDFSGRPQM 81
Query: 104 ANLDYITYGSSDFATVHYGPYWKFIKKLCMTELLGGRTLDQ-LRPIREEETKRFLRLMLK 162
A LD + A G +W+ ++L M + DQ L I +E ++
Sbjct: 82 ATLDIASNNRKGIAFADSGAHWQLHRRLAMATFALFKDGDQKLEKIICQEISTLCDML-- 139
Query: 163 KAELGEAVNFGGELMRLTNNVISRMTLGQRCSDSEDEAGEVRKLVKELNVLGAKFNLSDT 222
G++++ + NVIS + + + E ++ + + +K +L D
Sbjct: 140 ATHNGQSIDISFPVFVAVTNVISLICFNTSYKNGDPELNVIQNYNEGIIDNLSKDSLVDL 199
Query: 223 IWLFKNFDXXXXXXXXXXDARDRYDVMMERIIKEHEDERMKRKESGDGEGEIVKXXXXXX 282
+ K F + R D++ + I E+ E+ + + +++
Sbjct: 200 VPWLKIF-PNKTLEKLKSHVKIRNDLLNK--ILENYKEKFRSDSITNMLDTLMQAKMNSD 256
Query: 283 XXXXXXXNAEMRLTRENIKAFVMNIFGAGTDTSSITVEWGLAELINKPEVMEKARQEIDS 342
L+ +I + +IFGAG +T++ V+W LA L++ P+V +K +EID
Sbjct: 257 NGNAGPDQDSELLSDNHILTTIGDIFGAGVETTTSVVKWTLAFLLHNPQVKKKLYEEIDQ 316
Query: 343 VVGKSRIVEESDIPSLPYMQAVVKEILRLHPTGPLVV-RESSEDCTIADYRIPAKTRLFV 401
VG SR SD L ++A ++E+LRL P P+++ +++ D +I ++ + T + +
Sbjct: 317 NVGFSRTPTISDRNRLLLLEATIREVLRLRPVAPMLIPHKANVDSSIGEFAVDKGTEVII 376
Query: 402 NLWSLGRDPNHWENPLEFRPE 422
NLW+L + W P +F PE
Sbjct: 377 NLWALHHNEKEWHQPDQFMPE 397
>pdb|3PM0|A Chain A, Structural Characterization Of The Complex Between Alpha-
Naphthoflavone And Human Cytochrome P450 1b1 (Cyp1b1)
Length = 507
Score = 117 bits (293), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 96/403 (23%), Positives = 170/403 (42%), Gaps = 42/403 (10%)
Query: 42 IIGHMHLLGPVLPKAFHNLSTRNGPLVHFFIGSKPCVLASSPEMAKEFLKTNESIFMNRP 101
+IG+ +G +F L+ R G + +GS P V+ + + L S F +RP
Sbjct: 19 LIGNAAAVGQAAHLSFARLARRYGDVFQIRLGSCPIVVLNGERAIHQALVQQGSAFADRP 78
Query: 102 KTANLDYITYGSSDFATVHYGPYWKFIKKLCMTELLGGRTLD-QLRPIRE----EETKRF 156
A+ ++ G S A HY +WK ++ + + T + R + E E +
Sbjct: 79 SFASFRVVSGGRS-MAFGHYSEHWKVQRRAAHSMMRNFFTRQPRSRQVLEGHVLSEAREL 137
Query: 157 LRLMLKKAELGEAVNFGGELMRLTNNVISRMTLGQRCSDSEDEAGEVRKLVKELNVLGAK 216
+ L+++ + G ++ + NV+S + G R S + E E+ +E
Sbjct: 138 VALLVRGSADGAFLDPRPLTVVAVANVMSAVCFGCRYSHDDPEFRELLSHNEEFGRTVGA 197
Query: 217 FNLSDTIWLFKNFDXXXXXXXXXXDARDR--YDVMMERIIKEHEDER------------- 261
+L D + + F + +R + ++++ ++ E R
Sbjct: 198 GSLVDVMPWLQYFPNPVRTVFREFEQLNRNFSNFILDKFLRHCESLRPGAAPRDMMDAFI 257
Query: 262 --MKRKESGDGEGEIVKXXXXXXXXXXXXXNAEMRLTRENIKAFVMNIFGAGTDTSSITV 319
++K +GD G RL EN+ A + +IFGA DT S +
Sbjct: 258 LSAEKKAAGDSHG------------------GGARLDLENVPATITDIFGASQDTLSTAL 299
Query: 320 EWGLAELINKPEVMEKARQEIDSVVGKSRIVEESDIPSLPYMQAVVKEILRLHPTGPLVV 379
+W L P+V + + E+D VVG+ R+ D P+LPY+ A + E +R P+ +
Sbjct: 300 QWLLLLFTRYPDVQTRVQAELDQVVGRDRLPCMGDQPNLPYVLAFLYEAMRFSSFVPVTI 359
Query: 380 -RESSEDCTIADYRIPAKTRLFVNLWSLGRDPNHWENPLEFRP 421
++ + ++ Y IP T +FVN WS+ DP W NP F P
Sbjct: 360 PHATTANTSVLGYHIPKDTVVFVNQWSVNHDPLKWPNPENFDP 402
>pdb|3QZ1|A Chain A, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|B Chain B, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|C Chain C, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|D Chain D, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
Length = 496
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 95/388 (24%), Positives = 170/388 (43%), Gaps = 22/388 (5%)
Query: 42 IIGHMHLLGPVLPKAFHNLSTRNGPLVHFFIGSKPCVLASSPEMAKEFLKTNESIFMNRP 101
+ G +HLL P LP +L+ + GP+ +G + V+ +S +E + F RP
Sbjct: 34 VPGFLHLLQPNLPIHLLSLTQKLGPVYRLRLGLQEVVVLNSKRTIEEAMIRKWVDFAGRP 93
Query: 102 KTANLDYITYGSSDFATVHYGPYWKFIKKLCMTELLGGRTLDQLRPIREEETKRFLRLML 161
+ + ++ D + Y WK KKL + LL G T + P ++ T+ F M
Sbjct: 94 QIPSYKLVSQRCQDISLGDYSLLWKAHKKLTRSALLLG-TRSSMEPWVDQLTQEFCERM- 151
Query: 162 KKAELGEAVNFGGELMRLTNNVISRMTLGQRCSDSEDEAGE--VRKLVKELNVLGAKFNL 219
+ + G V E LT ++I +T G + D+ A V+ L+K + +
Sbjct: 152 -RVQAGAPVTIQKEFSLLTCSIICYLTFGNK-EDTLVHAFHDCVQDLMKTWD--HWSIQI 207
Query: 220 SDTIWLFKNFDXXXXXXXXXXDARDRYDVMMERIIKEHEDERMKRKESGDGEGEIVKXXX 279
D + + F A + D M+E+ ++ H++ + G+ +
Sbjct: 208 LDMVPFLRFFPNPGLWRLK--QAIENRDHMVEKQLRRHKESMVA------GQWRDMTDYM 259
Query: 280 XXXXXXXXXXNAEMRLTRENIKAFVMNIFGAGTDTSSITVEWGLAELINKPEVMEKARQE 339
+L ++ V+++F GT+T++ T+ W +A L++ PE+ + ++E
Sbjct: 260 LQGVGRQRVEEGPGQLLEGHVHMSVVDLFIGGTETTASTLSWAVAFLLHHPEIQRRLQEE 319
Query: 340 IDSVVGK----SRIVEESDIPSLPYMQAVVKEILRLHPTGPLVV-RESSEDCTIADYRIP 394
+D +G SR+ + D LP + A + E+LRL P PL + ++ +I Y IP
Sbjct: 320 LDRELGPGASCSRVTYK-DRARLPLLNATIAEVLRLRPVVPLALPHRTTRPSSIFGYDIP 378
Query: 395 AKTRLFVNLWSLGRDPNHWENPLEFRPE 422
+ NL D WE P EFRP+
Sbjct: 379 EGMVVIPNLQGAHLDETVWEQPHEFRPD 406
>pdb|3QM4|A Chain A, Human Cytochrome P450 (Cyp) 2d6 - Prinomastat Complex
pdb|3QM4|B Chain B, Human Cytochrome P450 (Cyp) 2d6 - Prinomastat Complex
pdb|3TBG|A Chain A, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TBG|B Chain B, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TBG|C Chain C, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TBG|D Chain D, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TDA|A Chain A, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
pdb|3TDA|B Chain B, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
pdb|3TDA|C Chain C, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
pdb|3TDA|D Chain D, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
Length = 479
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 98/395 (24%), Positives = 161/395 (40%), Gaps = 57/395 (14%)
Query: 54 PKAFHNLSTRNGPLVHFFIGSKPCVLASSPEMAKEFLKTNESIFMNRPKTANLDYITYG- 112
P F L R G + + P V+ + +E L T+ +RP + +G
Sbjct: 33 PYCFDQLRRRFGDVFSLQLAWTPVVVLNGLAAVREALVTHGEDTADRPPVPITQILGFGP 92
Query: 113 -SSDFATVHYGPYWKFIKKLCMTEL----LGGRTLDQLRPIREEETKRFLRLMLKKAELG 167
S YGP W+ ++ ++ L LG ++L+Q EE + G
Sbjct: 93 RSQGVFLARYGPAWREQRRFSVSTLRNLGLGKKSLEQWV---TEEAACLCAAFANHS--G 147
Query: 168 EAVNFGGELMRLTNNVISRMTLGQRCSDSE---------------DEAGEVRKLVKELNV 212
G L + +NVI+ +T G+R + +E+G +R+++ + V
Sbjct: 148 RPFRPNGLLDKAVSNVIASLTCGRRFEYDDPRFLRLLDLAQEGLKEESGFLREVLNAVPV 207
Query: 213 LGAKFNLSDTIWLFKNFDXXXXXXXXXXDARDRYDVMMERIIKEH----EDERMKRKESG 268
L L+ + F+ + ++ ++ EH + + R +
Sbjct: 208 LLHIPALAGKVLRFQK----------------AFLTQLDELLTEHRMTWDPAQPPRDLTE 251
Query: 269 DGEGEIVKXXXXXXXXXXXXXNAEMRLTRENIKAFVMNIFGAGTDTSSITVEWGLAELIN 328
E+ K N E EN++ V ++F AG T+S T+ WGL +I
Sbjct: 252 AFLAEMEKAKG----------NPESSFNDENLRIVVADLFSAGMVTTSTTLAWGLLLMIL 301
Query: 329 KPEVMEKARQEIDSVVGKSRIVEESDIPSLPYMQAVVKEILRLHPTGPL-VVRESSEDCT 387
P+V + +QEID V+G+ R E D +PY AV+ E+ R PL V +S D
Sbjct: 302 HPDVQRRVQQEIDDVIGQVRRPEMGDQAHMPYTTAVIHEVQRFGDIVPLGVTHMTSRDIE 361
Query: 388 IADYRIPAKTRLFVNLWSLGRDPNHWENPLEFRPE 422
+ +RIP T L NL S+ +D WE P F PE
Sbjct: 362 VQGFRIPKGTTLITNLSSVLKDEAVWEKPFRFHPE 396
>pdb|3E4E|A Chain A, Human Cytochrome P450 2e1 In Complex With The Inhibitor 4-
Methylpyrazole
pdb|3E4E|B Chain B, Human Cytochrome P450 2e1 In Complex With The Inhibitor 4-
Methylpyrazole
pdb|3E6I|A Chain A, Human Cytochrome P450 2e1 In Complex With The Inhibitor
Indazole
pdb|3E6I|B Chain B, Human Cytochrome P450 2e1 In Complex With The Inhibitor
Indazole
pdb|3GPH|A Chain A, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Decanoic Acid
pdb|3GPH|B Chain B, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Decanoic Acid
pdb|3KOH|A Chain A, Cytochrome P450 2e1 With Omega-Imidazolyl Octanoic Acid
pdb|3KOH|B Chain B, Cytochrome P450 2e1 With Omega-Imidazolyl Octanoic Acid
pdb|3LC4|A Chain A, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Dodecanoic Acid
pdb|3LC4|B Chain B, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Dodecanoic Acid
pdb|3T3Z|A Chain A, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|B Chain B, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|C Chain C, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|D Chain D, Human Cytochrome P450 2e1 In Complex With Pilocarpine
Length = 476
Score = 105 bits (262), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 104/374 (27%), Positives = 162/374 (43%), Gaps = 18/374 (4%)
Query: 53 LPKAFHNLSTRNGPLVHFFIGSKPCVLASSPEMAKEFLKTNESIFMNRPKTANLDYITYG 112
+PK+F L+ R GP+ ++GS+ V+ + KE L + F R +L
Sbjct: 32 IPKSFTRLAQRFGPVFTLYVGSQRMVVMHGYKAVKEALLDYKDEFSGR---GDLPAFHAH 88
Query: 113 SSDFATVHYGPYWKFIKKLCMTELLGGRTLDQLRPIREEETKRFLRLMLKKAELGEAVNF 172
+ GP WK I++ +T L Q R + FL L+K + G+ +
Sbjct: 89 RDRGIIFNNGPTWKDIRRFSLTTLRNYGMGKQGNESRIQREAHFLLEALRKTQ-GQPFDP 147
Query: 173 GGELMRLTNNVISRMTLGQRCSDSEDEAGEVRKLVKELNVLGAKFNLSDTIWL--FKNFD 230
+ NVI+ + L ++ D DE K ++ + + F+L T WL + NF
Sbjct: 148 TFLIGCAPCNVIADI-LFRKHFDYNDE-----KFLRLMYLFNENFHLLSTPWLQLYNNFP 201
Query: 231 XXXXXXXXXXDARDRYDVMMERIIKEHEDERMK-RKESGDGEGEIVKXXXXXXXXXXXXX 289
R + +KE+ ER+K +S D
Sbjct: 202 SFLHYL----PGSHRKVIKNVAEVKEYVSERVKEHHQSLDPNCPRDLTDCLLVEMEKEKH 257
Query: 290 NAEMRLTRENIKAFVMNIFGAGTDTSSITVEWGLAELINKPEVMEKARQEIDSVVGKSRI 349
+AE T + I V ++F AGT+T+S T+ +GL L+ PE+ EK +EID V+G SRI
Sbjct: 258 SAERLYTMDGITVTVADLFFAGTETTSTTLRYGLLILMKYPEIEEKLHEEIDRVIGPSRI 317
Query: 350 VEESDIPSLPYMQAVVKEILRLHPTGPL-VVRESSEDCTIADYRIPAKTRLFVNLWSLGR 408
D +PYM AVV EI R P + E++ D Y IP T + L S+
Sbjct: 318 PAIKDRQEMPYMDAVVHEIQRFITLVPSNLPHEATRDTIFRGYLIPKGTVVVPTLDSVLY 377
Query: 409 DPNHWENPLEFRPE 422
D + +P +F+PE
Sbjct: 378 DNQEFPDPEKFKPE 391
>pdb|2F9Q|A Chain A, Crystal Structure Of Human Cytochrome P450 2d6
pdb|2F9Q|B Chain B, Crystal Structure Of Human Cytochrome P450 2d6
pdb|2F9Q|C Chain C, Crystal Structure Of Human Cytochrome P450 2d6
pdb|2F9Q|D Chain D, Crystal Structure Of Human Cytochrome P450 2d6
Length = 479
Score = 102 bits (253), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 96/395 (24%), Positives = 160/395 (40%), Gaps = 57/395 (14%)
Query: 54 PKAFHNLSTRNGPLVHFFIGSKPCVLASSPEMAKEFLKTNESIFMNRPKTANLDYITYG- 112
P F L R G + + P V+ + +E L T+ +RP + +G
Sbjct: 33 PYCFDQLRRRFGDVFSLQLAWTPVVVLNGLAAVREALVTHGEDTADRPPVPITQILGFGP 92
Query: 113 -SSDFATVHYGPYWKFIKKLCMTEL----LGGRTLDQLRPIREEETKRFLRLMLKKAELG 167
S YGP W+ ++ ++ L LG ++L+Q EE + G
Sbjct: 93 RSQGVFLARYGPAWREQRRFSVSTLRNLGLGKKSLEQWV---TEEAACLCAAFANHS--G 147
Query: 168 EAVNFGGELMRLTNNVISRMTLGQRCSDSE---------------DEAGEVRKLVKELNV 212
G L + +NVI+ +T G+R + +E+G +R+++ + V
Sbjct: 148 RPFRPNGLLDKAVSNVIASLTCGRRFEYDDPRFLRLLDLAQEGLKEESGFLREVLNAVPV 207
Query: 213 LGAKFNLSDTIWLFKNFDXXXXXXXXXXDARDRYDVMMERIIKEH----EDERMKRKESG 268
L+ + F+ + ++ ++ EH + + R +
Sbjct: 208 DRHIPALAGKVLRFQK----------------AFLTQLDELLTEHRMTWDPAQPPRDLTE 251
Query: 269 DGEGEIVKXXXXXXXXXXXXXNAEMRLTRENIKAFVMNIFGAGTDTSSITVEWGLAELIN 328
E+ K N E EN++ V ++F AG T+S T+ WGL +I
Sbjct: 252 AFLAEMEKAKG----------NPESSFNDENLRIVVADLFSAGMVTTSTTLAWGLLLMIL 301
Query: 329 KPEVMEKARQEIDSVVGKSRIVEESDIPSLPYMQAVVKEILRLHPTGPL-VVRESSEDCT 387
P+V + +QEID V+G+ R E D +PY AV+ E+ R PL + +S D
Sbjct: 302 HPDVQRRVQQEIDDVIGQVRRPEMGDQAHMPYTTAVIHEVQRFGDIVPLGMTHMTSRDIE 361
Query: 388 IADYRIPAKTRLFVNLWSLGRDPNHWENPLEFRPE 422
+ +RIP T L NL S+ +D WE P F PE
Sbjct: 362 VQGFRIPKGTTLITNLSSVLKDEAVWEKPFRFHPE 396
>pdb|3EBS|A Chain A, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3EBS|B Chain B, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3EBS|C Chain C, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3EBS|D Chain D, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3T3Q|A Chain A, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
pdb|3T3Q|B Chain B, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
pdb|3T3Q|C Chain C, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
pdb|3T3Q|D Chain D, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
Length = 476
Score = 97.8 bits (242), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 92/369 (24%), Positives = 161/369 (43%), Gaps = 21/369 (5%)
Query: 60 LSTRNGPLVHFFIGSKPCVLASSPEMAKEFLKTNESIFMNRPKTANLDYITYGSSDFATV 119
+S R GP+ +G + V+ + +E L F R + A D++ G
Sbjct: 39 ISERYGPVFTIHLGPRRVVVLCGHDAVREALVDQAEEFSGRGEQATFDWVFKGYG--VVF 96
Query: 120 HYGPYWKFIKKLCMTEL----LGGRTLDQLRPIREEETKRFLRLMLKKAELGEAVNFGGE 175
G K +++ + L +G R +++ R +E FL L+ G ++
Sbjct: 97 SNGERAKQLRRFSIATLRDFGVGKRGIEE----RIQEEAGFLIDALRGTG-GANIDPTFF 151
Query: 176 LMRLTNNVISRMTLGQRCSDSEDEAGEVRKLVKELNVLGA-KFNLSDTIWLFKNFDXXXX 234
L R +NVIS + G R + E + +++ LG+ +F + T L++ F
Sbjct: 152 LSRTVSNVISSIVFGDRFDYKDKEFLSLLRMM-----LGSFQFTSTSTGQLYEMFSSVMK 206
Query: 235 XXXXXXDARDRYDVMMERIIKEHEDERMKRKESGDGEGEIVKXXXXXXXXXXXXXNAEMR 294
+ +E I + + E +R + + + N E
Sbjct: 207 HLPGPQQQAFQLLQGLEDFIAK-KVEHNQRTLDPNSPRDFIDSFLIRMQEEEKNPNTEFY 265
Query: 295 LTRENIKAFVMNIFGAGTDTSSITVEWGLAELINKPEVMEKARQEIDSVVGKSRIVEESD 354
L +N+ +N+F AGT+T S T+ +G L+ PEV K +EID V+GK+R + D
Sbjct: 266 L--KNLVMTTLNLFFAGTETVSTTLRYGFLLLMKHPEVEAKVHEEIDRVIGKNRQPKFED 323
Query: 355 IPSLPYMQAVVKEILRLHPTGPL-VVRESSEDCTIADYRIPAKTRLFVNLWSLGRDPNHW 413
+PYM+AV+ EI R P+ + R +D D+ +P T ++ L S+ RDP+ +
Sbjct: 324 RAKMPYMEAVIHEIQRFGDVIPMGLARRVKKDTKFRDFFLPKGTEVYPMLGSVLRDPSFF 383
Query: 414 ENPLEFRPE 422
NP +F P+
Sbjct: 384 SNPQDFNPQ 392
>pdb|3IBD|A Chain A, Crystal Structure Of A Cytochrome P450 2b6 Genetic Variant
In Complex With The Inhibitor
4-(4-Chlorophenyl)imidazole
pdb|3QOA|A Chain A, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-Benzylpyridine.
pdb|3QU8|A Chain A, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|B Chain B, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|C Chain C, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|D Chain D, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|E Chain E, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|F Chain F, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3UA5|A Chain A, Crystal Structure Of P450 2b6 (Y226hK262R) IN COMPLEX WITH
TWO Molecules Of Amlodipine
pdb|3UA5|B Chain B, Crystal Structure Of P450 2b6 (Y226hK262R) IN COMPLEX WITH
TWO Molecules Of Amlodipine
Length = 476
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 94/379 (24%), Positives = 164/379 (43%), Gaps = 27/379 (7%)
Query: 53 LPKAFHNLSTRNGPLVHFFIGSKPCVLASSPEMAKEFLKTNESIFMNRPKTANLDYITYG 112
L K+F + G + +G +P V+ E +E L F R K A +D G
Sbjct: 32 LLKSFLRFREKYGDVFTVHLGPRPVVMLCGVEAIREALVDKAEAFSGRGKIAMVDPFFRG 91
Query: 113 SSD-FATVHYGPYWKFIKKLCMTEL----LGGRTLDQLRPIREEETKRFLRLMLKKAELG 167
FA G WK +++ +T + +G R++++ R +E + L L+K++ G
Sbjct: 92 YGVIFAN---GNRWKVLRRFSVTTMRDFGMGKRSVEE----RIQEEAQCLIEELRKSK-G 143
Query: 168 EAVNFGGELMRLTNNVISRMTLGQRCSDSEDEAGEVRKLVKELNVLGAKFNLSDTIW--L 225
++ +T N+I + G+R + E +K LN+ F+L +++ L
Sbjct: 144 ALMDPTFLFQSITANIICSIVFGKRFHYQDQE------FLKMLNLFYQTFSLISSVFGQL 197
Query: 226 FKNFDXXXXXXXXXXDARDRYDVMME-RIIKEHEDERMKRKESGDGEGEIVKXXXXXXXX 284
F+ F R Y + E H E K +E+ D
Sbjct: 198 FELFSGFLKHFPGAH--RQVYKNLQEINAYIGHSVE--KHRETLDPSAPRDLIDTYLLHM 253
Query: 285 XXXXXNAEMRLTRENIKAFVMNIFGAGTDTSSITVEWGLAELINKPEVMEKARQEIDSVV 344
NA + +N+ +++F AGT+T+S T+ +G ++ P V E+ +EI+ V+
Sbjct: 254 EKEKSNAHSEFSHQNLNLNTLSLFFAGTETTSTTLRYGFLLMLKYPHVAERVYREIEQVI 313
Query: 345 GKSRIVEESDIPSLPYMQAVVKEILRLHPTGPLVVRE-SSEDCTIADYRIPAKTRLFVNL 403
G R E D +PY +AV+ EI R P+ V ++ + Y IP T +F+ L
Sbjct: 314 GPHRPPELHDRAKMPYTEAVIYEIQRFSDLLPMGVPHIVTQHTSFRGYIIPKDTEVFLIL 373
Query: 404 WSLGRDPNHWENPLEFRPE 422
+ DP+++E P F P+
Sbjct: 374 STALHDPHYFEKPDAFNPD 392
>pdb|2P85|A Chain A, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|B Chain B, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|C Chain C, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|D Chain D, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|E Chain E, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|F Chain F, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|3T3S|A Chain A, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|B Chain B, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|C Chain C, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|D Chain D, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|E Chain E, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|F Chain F, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|G Chain G, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|H Chain H, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|4EJG|A Chain A, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|B Chain B, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|C Chain C, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|D Chain D, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|E Chain E, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|F Chain F, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|G Chain G, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|H Chain H, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJH|A Chain A, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|B Chain B, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|C Chain C, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|D Chain D, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|E Chain E, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|F Chain F, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|G Chain G, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|H Chain H, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJI|A Chain A, Human Cytochrome P450 2a13 In Complex With Two Molecules
Of 4- (Methylnitrosamino)-1-(3-Puridyl)-1-Butanone
Length = 476
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 96/369 (26%), Positives = 162/369 (43%), Gaps = 21/369 (5%)
Query: 60 LSTRNGPLVHFFIGSKPCVLASSPEMAKEFLKTNESIFMNRPKTANLDYITYGSSDFATV 119
+S R GP+ +G + V+ + KE L F R + A D++ G
Sbjct: 39 ISERYGPVFTIHLGPRRVVVLCGHDAVKEALVDQAEEFSGRGEQATFDWLFKGYG--VAF 96
Query: 120 HYGPYWKFIKKLCMTEL----LGGRTLDQLRPIREEETKRFLRLMLKKAELGEAVNFGGE 175
G K +++ + L +G R +++ R +E FL L+ G ++
Sbjct: 97 SNGERAKQLRRFSIATLRGFGVGKRGIEE----RIQEEAGFLIDALRGTH-GANIDPTFF 151
Query: 176 LMRLTNNVISRMTLGQRCSDSEDEAGEVRKLVKELNVLGA-KFNLSDTIWLFKNFDXXXX 234
L R +NVIS + G R D ED+ E L++ + LG+ +F + T L++ F
Sbjct: 152 LSRTVSNVISSIVFGDRF-DYEDK--EFLSLLRMM--LGSFQFTATSTGQLYEMFSSVMK 206
Query: 235 XXXXXXDARDRYDVMMERIIKEHEDERMKRKESGDGEGEIVKXXXXXXXXXXXXXNAEMR 294
+ +E I + + E +R + + + N E
Sbjct: 207 HLPGPQQQAFKELQGLEDFIAK-KVEHNQRTLDPNSPRDFIDSFLIRMQEEEKNPNTEFY 265
Query: 295 LTRENIKAFVMNIFGAGTDTSSITVEWGLAELINKPEVMEKARQEIDSVVGKSRIVEESD 354
L +N+ +N+F AGT+T S T+ +G L+ PEV K +EID V+GK+R + D
Sbjct: 266 L--KNLVMTTLNLFFAGTETVSTTLRYGFLLLMKHPEVEAKVHEEIDRVIGKNRQPKFED 323
Query: 355 IPSLPYMQAVVKEILRLHPTGPL-VVRESSEDCTIADYRIPAKTRLFVNLWSLGRDPNHW 413
+PY +AV+ EI R P+ + ++D D+ +P T +F L S+ RDP +
Sbjct: 324 RAKMPYTEAVIHEIQRFGDMLPMGLAHRVNKDTKFRDFFLPKGTEVFPMLGSVLRDPRFF 383
Query: 414 ENPLEFRPE 422
NP +F P+
Sbjct: 384 SNPRDFNPQ 392
>pdb|1Z10|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z10|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z10|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z10|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z11|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|1Z11|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|1Z11|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|1Z11|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|2FDU|A Chain A, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDU|B Chain B, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDU|C Chain C, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDU|D Chain D, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|A Chain A, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|B Chain B, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|C Chain C, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|D Chain D, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDY|A Chain A, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|2FDY|B Chain B, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|2FDY|C Chain C, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|2FDY|D Chain D, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|3T3R|A Chain A, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|3T3R|B Chain B, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|3T3R|C Chain C, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|3T3R|D Chain D, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|4EJJ|A Chain A, Human Cytochrome P450 2a6 In Complex With Nicotine
pdb|4EJJ|B Chain B, Human Cytochrome P450 2a6 In Complex With Nicotine
pdb|4EJJ|C Chain C, Human Cytochrome P450 2a6 In Complex With Nicotine
pdb|4EJJ|D Chain D, Human Cytochrome P450 2a6 In Complex With Nicotine
Length = 476
Score = 95.1 bits (235), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 90/368 (24%), Positives = 159/368 (43%), Gaps = 19/368 (5%)
Query: 60 LSTRNGPLVHFFIGSKPCVLASSPEMAKEFLKTNESIFMNRPKTANLDYITYGSSDFATV 119
+S R GP+ +G + V+ + +E L F R + A D++ G
Sbjct: 39 ISERYGPVFTIHLGPRRVVVLCGHDAVREALVDQAEEFSGRGEQATFDWVFKGYG--VVF 96
Query: 120 HYGPYWKFIKKLCMTEL----LGGRTLDQLRPIREEETKRFLRLMLKKAELGEAVNFGGE 175
G K +++ + L +G R +++ R +E FL L+ G ++
Sbjct: 97 SNGERAKQLRRFSIATLRDFGVGKRGIEE----RIQEEAGFLIDALRGTG-GANIDPTFF 151
Query: 176 LMRLTNNVISRMTLGQRCSDSEDEAGEVRKLVKELNVLGAKFNLSDTIWLFKNFDXXXXX 235
L R +NVIS + G R + E + +++ L + +F + T L++ F
Sbjct: 152 LSRTVSNVISSIVFGDRFDYKDKEFLSLLRMM--LGIF--QFTSTSTGQLYEMFSSVMKH 207
Query: 236 XXXXXDARDRYDVMMERIIKEHEDERMKRKESGDGEGEIVKXXXXXXXXXXXXXNAEMRL 295
+ +E I + + E +R + + + N E L
Sbjct: 208 LPGPQQQAFQLLQGLEDFIAK-KVEHNQRTLDPNSPRDFIDSFLIRMQEEEKNPNTEFYL 266
Query: 296 TRENIKAFVMNIFGAGTDTSSITVEWGLAELINKPEVMEKARQEIDSVVGKSRIVEESDI 355
+N+ +N+F GT+T S T+ +G L+ PEV K +EID V+GK+R + D
Sbjct: 267 --KNLVMTTLNLFIGGTETVSTTLRYGFLLLMKHPEVEAKVHEEIDRVIGKNRQPKFEDR 324
Query: 356 PSLPYMQAVVKEILRLHPTGPL-VVRESSEDCTIADYRIPAKTRLFVNLWSLGRDPNHWE 414
+PYM+AV+ EI R P+ + R +D D+ +P T ++ L S+ RDP+ +
Sbjct: 325 AKMPYMEAVIHEIQRFGDVIPMSLARRVKKDTKFRDFFLPKGTEVYPMLGSVLRDPSFFS 384
Query: 415 NPLEFRPE 422
NP +F P+
Sbjct: 385 NPQDFNPQ 392
>pdb|2PG7|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
pdb|2PG7|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
pdb|2PG7|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
pdb|2PG7|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
Length = 476
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 89/368 (24%), Positives = 158/368 (42%), Gaps = 19/368 (5%)
Query: 60 LSTRNGPLVHFFIGSKPCVLASSPEMAKEFLKTNESIFMNRPKTANLDYITYGSSDFATV 119
+S R GP+ +G + V+ + +E L F R + A D++ G
Sbjct: 39 ISERYGPVFTIHLGPRRVVVLCGHDAVREALVDQAEEFSGRGEQATFDWVFKGYG--VVF 96
Query: 120 HYGPYWKFIKKLCMTEL----LGGRTLDQLRPIREEETKRFLRLMLKKAELGEAVNFGGE 175
G K +++ + L +G R +++ R +E FL L+ G ++
Sbjct: 97 SNGERAKQLRRFSIATLRDFGVGKRGIEE----RIQEEAGFLIDALRGTG-GANIDPTFF 151
Query: 176 LMRLTNNVISRMTLGQRCSDSEDEAGEVRKLVKELNVLGAKFNLSDTIWLFKNFDXXXXX 235
L R +NVIS + G R + E + +++ L + +F + T L++ F
Sbjct: 152 LSRTVSNVISSIVFGDRFDYKDKEFLSLLRMM--LGIF--QFTSTSTGQLYEMFSSVMKH 207
Query: 236 XXXXXDARDRYDVMMERIIKEHEDERMKRKESGDGEGEIVKXXXXXXXXXXXXXNAEMRL 295
+ +E I + + E +R + + + N E L
Sbjct: 208 LPGPQQQAFQLLQGLEDFIAK-KVEHNQRTLDPNSPRDFIDSFLIRMQEEEKNPNTEFYL 266
Query: 296 TRENIKAFVMNIFGAGTDTSSITVEWGLAELINKPEVMEKARQEIDSVVGKSRIVEESDI 355
+N+ + +F GT+T S T+ +G L+ PEV K +EID V+GK+R + D
Sbjct: 267 --KNLVMTTLQLFVGGTETVSTTLRYGFLLLMKHPEVEAKVHEEIDRVIGKNRQPKFEDR 324
Query: 356 PSLPYMQAVVKEILRLHPTGPL-VVRESSEDCTIADYRIPAKTRLFVNLWSLGRDPNHWE 414
+PYM+AV+ EI R P+ + R +D D+ +P T ++ L S+ RDP+ +
Sbjct: 325 AKMPYMEAVIHEIQRFGDVIPMSLARRVKKDTKFRDFFLPKGTEVYPMLGSVLRDPSFFS 384
Query: 415 NPLEFRPE 422
NP +F P+
Sbjct: 385 NPQDFNPQ 392
>pdb|2PG5|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 N297q
pdb|2PG5|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 N297q
pdb|2PG5|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 N297q
pdb|2PG5|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 N297q
Length = 476
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 89/368 (24%), Positives = 158/368 (42%), Gaps = 19/368 (5%)
Query: 60 LSTRNGPLVHFFIGSKPCVLASSPEMAKEFLKTNESIFMNRPKTANLDYITYGSSDFATV 119
+S R GP+ +G + V+ + +E L F R + A D++ G
Sbjct: 39 ISERYGPVFTIHLGPRRVVVLCGHDAVREALVDQAEEFSGRGEQATFDWVFKGYG--VVF 96
Query: 120 HYGPYWKFIKKLCMTEL----LGGRTLDQLRPIREEETKRFLRLMLKKAELGEAVNFGGE 175
G K +++ + L +G R +++ R +E FL L+ G ++
Sbjct: 97 SNGERAKQLRRFSIATLRDFGVGKRGIEE----RIQEEAGFLIDALRGTG-GANIDPTFF 151
Query: 176 LMRLTNNVISRMTLGQRCSDSEDEAGEVRKLVKELNVLGAKFNLSDTIWLFKNFDXXXXX 235
L R +NVIS + G R + E + +++ L + +F + T L++ F
Sbjct: 152 LSRTVSNVISSIVFGDRFDYKDKEFLSLLRMM--LGIF--QFTSTSTGQLYEMFSSVMKH 207
Query: 236 XXXXXDARDRYDVMMERIIKEHEDERMKRKESGDGEGEIVKXXXXXXXXXXXXXNAEMRL 295
+ +E I + + E +R + + + N E L
Sbjct: 208 LPGPQQQAFQLLQGLEDFIAK-KVEHNQRTLDPNSPRDFIDSFLIRMQEEEKNPNTEFYL 266
Query: 296 TRENIKAFVMNIFGAGTDTSSITVEWGLAELINKPEVMEKARQEIDSVVGKSRIVEESDI 355
+N+ + +F GT+T S T+ +G L+ PEV K +EID V+GK+R + D
Sbjct: 267 --KNLVMTTLQLFIGGTETVSTTLRYGFLLLMKHPEVEAKVHEEIDRVIGKNRQPKFEDR 324
Query: 356 PSLPYMQAVVKEILRLHPTGPL-VVRESSEDCTIADYRIPAKTRLFVNLWSLGRDPNHWE 414
+PYM+AV+ EI R P+ + R +D D+ +P T ++ L S+ RDP+ +
Sbjct: 325 AKMPYMEAVIHEIQRFGDVIPMSLARRVKKDTKFRDFFLPKGTEVYPMLGSVLRDPSFFS 384
Query: 415 NPLEFRPE 422
NP +F P+
Sbjct: 385 NPQDFNPQ 392
>pdb|2PG6|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
pdb|2PG6|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
pdb|2PG6|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
pdb|2PG6|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
Length = 476
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 89/368 (24%), Positives = 158/368 (42%), Gaps = 19/368 (5%)
Query: 60 LSTRNGPLVHFFIGSKPCVLASSPEMAKEFLKTNESIFMNRPKTANLDYITYGSSDFATV 119
+S R GP+ +G + V+ + +E L F R + A D++ G
Sbjct: 39 ISERYGPVFTIHLGPRRVVVLCGHDAVREALVDQAEEFSGRGEQATFDWVFKGYG--VVF 96
Query: 120 HYGPYWKFIKKLCMTEL----LGGRTLDQLRPIREEETKRFLRLMLKKAELGEAVNFGGE 175
G K +++ + L +G R +++ R +E FL L+ G ++
Sbjct: 97 SNGERAKQLRRFSIATLRDFGVGKRGIEE----RIQEEAGFLIDALRGTG-GANIDPTFF 151
Query: 176 LMRLTNNVISRMTLGQRCSDSEDEAGEVRKLVKELNVLGAKFNLSDTIWLFKNFDXXXXX 235
L R +NVIS + G R + E + +++ L + +F + T L++ F
Sbjct: 152 LSRTVSNVISSIVFGDRFDYKDKEFLSLLRMM--LGIF--QFTSTSTGQLYEMFSSVMKH 207
Query: 236 XXXXXDARDRYDVMMERIIKEHEDERMKRKESGDGEGEIVKXXXXXXXXXXXXXNAEMRL 295
+ +E I + + E +R + + + N E L
Sbjct: 208 LPGPQQQAFQCLQGLEDFIAK-KVEHNQRTLDPNSPRDFIDSFLIRMQEEEKNPNTEFYL 266
Query: 296 TRENIKAFVMNIFGAGTDTSSITVEWGLAELINKPEVMEKARQEIDSVVGKSRIVEESDI 355
+N+ + +F GT+T S T+ +G L+ PEV K +EID V+GK+R + D
Sbjct: 267 --KNLVMTTLQLFIGGTETVSTTLRYGFLLLMKHPEVEAKVHEEIDRVIGKNRQPKFEDR 324
Query: 356 PSLPYMQAVVKEILRLHPTGPL-VVRESSEDCTIADYRIPAKTRLFVNLWSLGRDPNHWE 414
+PYM+AV+ EI R P+ + R +D D+ +P T ++ L S+ RDP+ +
Sbjct: 325 AKMPYMEAVIHEIQRFGDVIPMSLARRVKKDTKFRDFFLPKGTEVYPMLGSVLRDPSFFS 384
Query: 415 NPLEFRPE 422
NP +F P+
Sbjct: 385 NPQDFNPQ 392
>pdb|1PQ2|A Chain A, Crystal Structure Of Human Drug Metabolizing Cytochrome
P450 2c8
pdb|1PQ2|B Chain B, Crystal Structure Of Human Drug Metabolizing Cytochrome
P450 2c8
pdb|2NNH|A Chain A, Cyp2c8dh Complexed With 2 Molecules Of 9-Cis Retinoic Acid
pdb|2NNH|B Chain B, Cyp2c8dh Complexed With 2 Molecules Of 9-Cis Retinoic Acid
pdb|2NNI|A Chain A, Cyp2c8dh Complexed With Montelukast
pdb|2NNJ|A Chain A, Cyp2c8dh Complexed With Felodipine
pdb|2VN0|A Chain A, Cyp2c8dh Complexed With Troglitazone
Length = 476
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 100/376 (26%), Positives = 152/376 (40%), Gaps = 27/376 (7%)
Query: 55 KAFHNLSTRNGPLVHFFIGSKPCVLASSPEMAKEFLKTNESIFMNRPKTANLDYITYGSS 114
K+F N S GP+ + G P V+ E KE L N F R + IT G
Sbjct: 34 KSFTNFSKVYGPVFTVYFGMNPIVVFHGYEAVKEALIDNGEEFSGRGNSPISQRITKGLG 93
Query: 115 DFATVHYGPYWKFIKKLCMTEL----LGGRTLDQLRPIREEETKRFLRLMLKKAELGEAV 170
++ G WK I++ +T L +G R+++ R +E L L+K +
Sbjct: 94 IISS--NGKRWKEIRRFSLTTLRNFGMGKRSIED----RVQEEAHCLVEELRKTK-ASPC 146
Query: 171 NFGGELMRLTNNVISRMTLGQRCSDSEDEAGEVRKLVKELNVLGAKFNLSDTIWL--FKN 228
+ L NVI + +R D +D+ L+K N F + ++ W+ N
Sbjct: 147 DPTFILGCAPCNVICSVVFQKR-FDYKDQ--NFLTLMKRFN---ENFRILNSPWIQVCNN 200
Query: 229 FDXXXXXXXXXXDARDRYDVMMERIIKEHEDERMKRKESGDGEGEIVKXXXXXXXXXXXX 288
F + + + I+E E + + I
Sbjct: 201 FPLLIDCFPGTHNKVLKNVALTRSYIREKVKEHQASLDVNNPRDFI---DCFLIKMEQEK 257
Query: 289 XNAEMRLTRENIKAFVMNIFGAGTDTSSITVEWGLAELINKPEVMEKARQEIDSVVGKSR 348
N + EN+ V ++F AGT+T+S T+ +GL L+ PEV K ++EID V+G+ R
Sbjct: 258 DNQKSEFNIENLVGTVADLFVAGTETTSTTLRYGLLLLLKHPEVTAKVQEEIDHVIGRHR 317
Query: 349 IVEESDIPSLPYMQAVVKEILR---LHPTGPLVVRESSEDCTIADYRIPAKTRLFVNLWS 405
D +PY AVV EI R L PTG V + D +Y IP T + L S
Sbjct: 318 SPCMQDRSHMPYTDAVVHEIQRYSDLVPTG--VPHAVTTDTKFRNYLIPKGTTIMALLTS 375
Query: 406 LGRDPNHWENPLEFRP 421
+ D + NP F P
Sbjct: 376 VLHDDKEFPNPNIFDP 391
>pdb|3MZS|A Chain A, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
pdb|3MZS|B Chain B, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
pdb|3MZS|C Chain C, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
pdb|3MZS|D Chain D, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
Length = 486
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/132 (34%), Positives = 73/132 (55%), Gaps = 8/132 (6%)
Query: 294 RLTRENIKAFVMNIFGAGTDTSSITVEWGLAELINKPEVMEKARQEIDSVVGKSRIVEES 353
++ E++KA + + G +T+S+T++W L E+ V E R+E V +R E
Sbjct: 271 KMLLEDVKANITEMLAGGVNTTSMTLQWHLYEMARSLNVQEMLREE----VLNARRQAEG 326
Query: 354 DIPSL----PYMQAVVKEILRLHPTGPLVVRESSEDCTIADYRIPAKTRLFVNLWSLGRD 409
DI + P ++A +KE LRLHP + R D + DY IPAKT + V ++++GRD
Sbjct: 327 DISKMLQMVPLLKASIKETLRLHPISVTLQRYPESDLVLQDYLIPAKTLVQVAIYAMGRD 386
Query: 410 PNHWENPLEFRP 421
P + +P +F P
Sbjct: 387 PAFFSSPDKFDP 398
>pdb|3N9Y|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With
Cholesterol
pdb|3N9Y|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With
Cholesterol
pdb|3N9Z|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With 22-
Hydroxycholesterol
pdb|3N9Z|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With 22-
Hydroxycholesterol
pdb|3NA1|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With 20-
Hydroxycholesterol
pdb|3NA1|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With 20-
Hydroxycholesterol
Length = 487
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 75/131 (57%)
Query: 291 AEMRLTRENIKAFVMNIFGAGTDTSSITVEWGLAELINKPEVMEKARQEIDSVVGKSRIV 350
+ +++ E+IKA V + G DT+S+T++W L E+ +V + R E+ + +++
Sbjct: 267 GDSKMSFEDIKANVTEMLAGGVDTTSMTLQWHLYEMARNLKVQDMLRAEVLAARHQAQGD 326
Query: 351 EESDIPSLPYMQAVVKEILRLHPTGPLVVRESSEDCTIADYRIPAKTRLFVNLWSLGRDP 410
+ + +P ++A +KE LRLHP + R D + DY IPAKT + V +++LGR+P
Sbjct: 327 MATMLQLVPLLKASIKETLRLHPISVTLQRYLVNDLVLRDYMIPAKTLVQVAIYALGREP 386
Query: 411 NHWENPLEFRP 421
+ +P F P
Sbjct: 387 TFFFDPENFDP 397
>pdb|3NA0|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With 20,22-
Dihydroxycholesterol
pdb|3NA0|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With 20,22-
Dihydroxycholesterol
Length = 471
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 75/131 (57%)
Query: 291 AEMRLTRENIKAFVMNIFGAGTDTSSITVEWGLAELINKPEVMEKARQEIDSVVGKSRIV 350
+ +++ E+IKA V + G DT+S+T++W L E+ +V + R E+ + +++
Sbjct: 264 GDSKMSFEDIKANVTEMLAGGVDTTSMTLQWHLYEMARNLKVQDMLRAEVLAARHQAQGD 323
Query: 351 EESDIPSLPYMQAVVKEILRLHPTGPLVVRESSEDCTIADYRIPAKTRLFVNLWSLGRDP 410
+ + +P ++A +KE LRLHP + R D + DY IPAKT + V +++LGR+P
Sbjct: 324 MATMLQLVPLLKASIKETLRLHPISVTLQRYLVNDLVLRDYMIPAKTLVQVAIYALGREP 383
Query: 411 NHWENPLEFRP 421
+ +P F P
Sbjct: 384 TFFFDPENFDP 394
>pdb|4H1N|A Chain A, Crystal Structure Of P450 2b4 F297a Mutant In Complex With
Anti- Platelet Drug Clopidogrel
Length = 479
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 67/125 (53%), Gaps = 1/125 (0%)
Query: 298 ENIKAFVMNIFGAGTDTSSITVEWGLAELINKPEVMEKARQEIDSVVGKSRIVEESDIPS 357
+N+ V+++F AGT+T+S T+ +G ++ P V E+ ++EI+ V+G R D
Sbjct: 267 QNLILTVLSLFAAGTETTSTTLRYGFLLMLKYPHVTERVQKEIEQVIGSHRPPALDDRAK 326
Query: 358 LPYMQAVVKEILRLHPTGPLVVRES-SEDCTIADYRIPAKTRLFVNLWSLGRDPNHWENP 416
+PY AV+ EI RL P V + ++D Y IP T +F L S DP ++E P
Sbjct: 327 MPYTDAVIHEIQRLGDLIPFGVPHTVTKDTQFRGYVIPKNTEVFPVLSSALHDPRYFETP 386
Query: 417 LEFRP 421
F P
Sbjct: 387 NTFNP 391
Score = 36.2 bits (82), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 32/142 (22%), Positives = 65/142 (45%), Gaps = 11/142 (7%)
Query: 55 KAFHNLSTRNGPLVHFFIGSKPCVLASSPEMAKEFLKTNESIFMNRPKTANLDYITYGSS 114
++F L + G + ++GS+P V+ + +E L F R K A +D I G
Sbjct: 34 RSFLRLREKYGDVFTVYLGSRPVVVLCGTDAIREALVDQAEAFSGRGKIAVVDPIFQGYG 93
Query: 115 DFATVHYGPYWKFIKKLCMTEL----LGGRTLDQLRPIREEETKRFLRLMLKKAELGEAV 170
G W+ +++ + + +G R++++ R +E R L L+K++ G +
Sbjct: 94 --VIFANGERWRALRRFSLATMRDFGMGKRSVEE----RIQEEARCLVEELRKSK-GALL 146
Query: 171 NFGGELMRLTNNVISRMTLGQR 192
+ +T+N+I + G+R
Sbjct: 147 DNTLLFHSITSNIICSIVFGKR 168
>pdb|1PO5|A Chain A, Structure Of Mammalian Cytochrome P450 2b4
Length = 476
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 67/125 (53%), Gaps = 1/125 (0%)
Query: 298 ENIKAFVMNIFGAGTDTSSITVEWGLAELINKPEVMEKARQEIDSVVGKSRIVEESDIPS 357
+N+ V+++F AGT+T+S T+ +G ++ P V E+ ++EI+ V+G R D
Sbjct: 267 QNLILTVLSLFFAGTETTSTTLRYGFLLMLKYPHVTERVQKEIEQVIGSHRPPALDDRAK 326
Query: 358 LPYMQAVVKEILRLHPTGPLVVRES-SEDCTIADYRIPAKTRLFVNLWSLGRDPNHWENP 416
+PY AV+ EI RL P V + ++D Y IP T +F L S DP ++E P
Sbjct: 327 MPYTDAVIHEIQRLGDLIPFGVPHTVTKDTQFRGYVIPKNTEVFPVLSSALHDPRYFETP 386
Query: 417 LEFRP 421
F P
Sbjct: 387 NTFNP 391
Score = 35.8 bits (81), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 32/142 (22%), Positives = 65/142 (45%), Gaps = 11/142 (7%)
Query: 55 KAFHNLSTRNGPLVHFFIGSKPCVLASSPEMAKEFLKTNESIFMNRPKTANLDYITYGSS 114
++F L + G + ++GS+P V+ + +E L F R K A +D I G
Sbjct: 34 RSFLRLREKYGDVFTVYLGSRPVVVLCGTDAIREALVDQAEAFSGRGKIAVVDPIFQGYG 93
Query: 115 DFATVHYGPYWKFIKKLCMTEL----LGGRTLDQLRPIREEETKRFLRLMLKKAELGEAV 170
G W+ +++ + + +G R++++ R +E R L L+K++ G +
Sbjct: 94 --VIFANGERWRALRRFSLATMRDFGMGKRSVEE----RIQEEARCLVEELRKSK-GALL 146
Query: 171 NFGGELMRLTNNVISRMTLGQR 192
+ +T+N+I + G+R
Sbjct: 147 DNTLLFHSITSNIICSIVFGKR 168
>pdb|1SUO|A Chain A, Structure Of Mammalian Cytochrome P450 2b4 With Bound
4-(4- Chlorophenyl)imidazole
pdb|2BDM|A Chain A, Structure Of Cytochrome P450 2b4 With Bound Bifonazole
pdb|3G5N|A Chain A, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|B Chain B, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|C Chain C, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|D Chain D, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|A Chain A, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|B Chain B, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|C Chain C, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|D Chain D, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3KW4|A Chain A, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Ticlopidine
pdb|3ME6|A Chain A, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|B Chain B, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|C Chain C, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|D Chain D, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3MVR|A Chain A, Crystal Structure Of Cytochrome P450 2b4-H226y In A Closed
Conformation
pdb|3MVR|B Chain B, Crystal Structure Of Cytochrome P450 2b4-H226y In A Closed
Conformation
pdb|3R1A|A Chain A, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|B Chain B, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|C Chain C, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|D Chain D, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|E Chain E, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|F Chain F, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|G Chain G, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|H Chain H, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|A Chain A, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|B Chain B, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|C Chain C, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|D Chain D, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3TMZ|A Chain A, Crystal Structure Of P450 2b4(H226y) In Complex With
Amlodipine
pdb|3UAS|A Chain A, Cytochrome P450 2b4 Covalently Bound To The
Mechanism-based Inactivator 9-ethynylphenanthrene
Length = 476
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 67/125 (53%), Gaps = 1/125 (0%)
Query: 298 ENIKAFVMNIFGAGTDTSSITVEWGLAELINKPEVMEKARQEIDSVVGKSRIVEESDIPS 357
+N+ V+++F AGT+T+S T+ +G ++ P V E+ ++EI+ V+G R D
Sbjct: 267 QNLILTVLSLFFAGTETTSTTLRYGFLLMLKYPHVTERVQKEIEQVIGSHRPPALDDRAK 326
Query: 358 LPYMQAVVKEILRLHPTGPLVVRES-SEDCTIADYRIPAKTRLFVNLWSLGRDPNHWENP 416
+PY AV+ EI RL P V + ++D Y IP T +F L S DP ++E P
Sbjct: 327 MPYTDAVIHEIQRLGDLIPFGVPHTVTKDTQFRGYVIPKNTEVFPVLSSALHDPRYFETP 386
Query: 417 LEFRP 421
F P
Sbjct: 387 NTFNP 391
Score = 35.8 bits (81), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 32/142 (22%), Positives = 65/142 (45%), Gaps = 11/142 (7%)
Query: 55 KAFHNLSTRNGPLVHFFIGSKPCVLASSPEMAKEFLKTNESIFMNRPKTANLDYITYGSS 114
++F L + G + ++GS+P V+ + +E L F R K A +D I G
Sbjct: 34 RSFLRLREKYGDVFTVYLGSRPVVVLCGTDAIREALVDQAEAFSGRGKIAVVDPIFQGYG 93
Query: 115 DFATVHYGPYWKFIKKLCMTEL----LGGRTLDQLRPIREEETKRFLRLMLKKAELGEAV 170
G W+ +++ + + +G R++++ R +E R L L+K++ G +
Sbjct: 94 --VIFANGERWRALRRFSLATMRDFGMGKRSVEE----RIQEEARCLVEELRKSK-GALL 146
Query: 171 NFGGELMRLTNNVISRMTLGQR 192
+ +T+N+I + G+R
Sbjct: 147 DNTLLFHSITSNIICSIVFGKR 168
>pdb|2Q6N|A Chain A, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|B Chain B, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|C Chain C, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|D Chain D, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|E Chain E, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|F Chain F, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|G Chain G, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
Length = 478
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 67/125 (53%), Gaps = 1/125 (0%)
Query: 298 ENIKAFVMNIFGAGTDTSSITVEWGLAELINKPEVMEKARQEIDSVVGKSRIVEESDIPS 357
+N+ V+++F AGT+T+S T+ +G ++ P V E+ ++EI+ V+G R D
Sbjct: 267 QNLILTVLSLFFAGTETTSTTLRYGFLLMLKYPHVTERVQKEIEQVIGSHRPPALDDRAK 326
Query: 358 LPYMQAVVKEILRLHPTGPLVVRES-SEDCTIADYRIPAKTRLFVNLWSLGRDPNHWENP 416
+PY AV+ EI RL P V + ++D Y IP T +F L S DP ++E P
Sbjct: 327 MPYTDAVIHEIQRLGDLIPFGVPHTVTKDTQFRGYVIPKNTEVFPVLSSALHDPRYFETP 386
Query: 417 LEFRP 421
F P
Sbjct: 387 NTFNP 391
Score = 36.2 bits (82), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 32/142 (22%), Positives = 65/142 (45%), Gaps = 11/142 (7%)
Query: 55 KAFHNLSTRNGPLVHFFIGSKPCVLASSPEMAKEFLKTNESIFMNRPKTANLDYITYGSS 114
++F L + G + ++GS+P V+ + +E L F R K A +D I G
Sbjct: 34 RSFLRLREKYGDVFTVYLGSRPVVVLCGTDAIREALVDQAEAFSGRGKIAVVDPIFQGYG 93
Query: 115 DFATVHYGPYWKFIKKLCMTEL----LGGRTLDQLRPIREEETKRFLRLMLKKAELGEAV 170
G W+ +++ + + +G R++++ R +E R L L+K++ G +
Sbjct: 94 --VIFANGERWRALRRFSLATMRDFGMGKRSVEE----RIQEEARCLVEELRKSK-GALL 146
Query: 171 NFGGELMRLTNNVISRMTLGQR 192
+ +T+N+I + G+R
Sbjct: 147 DNTLLFHSITSNIICSIVFGKR 168
>pdb|3TK3|A Chain A, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
pdb|3TK3|B Chain B, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
pdb|3TK3|C Chain C, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
pdb|3TK3|D Chain D, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
Length = 476
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 67/125 (53%), Gaps = 1/125 (0%)
Query: 298 ENIKAFVMNIFGAGTDTSSITVEWGLAELINKPEVMEKARQEIDSVVGKSRIVEESDIPS 357
+N+ V+++F AGT+T+S T+ +G ++ P V E+ ++EI+ V+G R D
Sbjct: 267 QNLILTVLSLFFAGTETTSTTLRYGFLLMLKYPHVTERVQKEIEQVIGSHRPPALDDRAK 326
Query: 358 LPYMQAVVKEILRLHPTGPLVVRES-SEDCTIADYRIPAKTRLFVNLWSLGRDPNHWENP 416
+PY AV+ EI RL P V + ++D Y IP T +F L S DP ++E P
Sbjct: 327 MPYTDAVIHEIQRLGDLIPFGVPHTVTKDTQFRGYVIPKNTEVFPVLSSALHDPRYFETP 386
Query: 417 LEFRP 421
F P
Sbjct: 387 NTFNP 391
Score = 35.8 bits (81), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 33/144 (22%), Positives = 66/144 (45%), Gaps = 11/144 (7%)
Query: 53 LPKAFHNLSTRNGPLVHFFIGSKPCVLASSPEMAKEFLKTNESIFMNRPKTANLDYITYG 112
L ++F L + G + ++GS+P V+ + +E L F R K A +D I G
Sbjct: 32 LLRSFLRLREKYGDVFTVYLGSRPVVVLCGTDAIREALVDQAEAFSGRGKIAVVDPIFQG 91
Query: 113 SSDFATVHYGPYWKFIKKLCMTEL----LGGRTLDQLRPIREEETKRFLRLMLKKAELGE 168
G W+ +++ + + +G R++++ R +E R L L+K++ G
Sbjct: 92 YG--VIFANGERWRALRRFSLATMRDFGMGKRSVEE----RIQEEARCLVEELRKSK-GA 144
Query: 169 AVNFGGELMRLTNNVISRMTLGQR 192
++ +T+N+I + G+R
Sbjct: 145 LLDNTLLFHSITSNIICSIVFGKR 168
>pdb|2Q9F|A Chain A, Crystal Structure Of Human Cytochrome P450 46a1 In Complex
With Cholesterol-3-Sulphate
pdb|2Q9G|A Chain A, Crystal Structure Of Human Cytochrome P450 46a1
pdb|3MDM|A Chain A, Thioperamide Complex Of Cytochrome P450 46a1
pdb|3MDR|A Chain A, Tranylcypromine Complex Of Cytochrome P450 46a1
pdb|3MDR|B Chain B, Tranylcypromine Complex Of Cytochrome P450 46a1
pdb|3MDT|A Chain A, Voriconazole Complex Of Cytochrome P450 46a1
pdb|3MDT|B Chain B, Voriconazole Complex Of Cytochrome P450 46a1
pdb|3MDV|A Chain A, Clotrimazole Complex Of Cytochrome P450 46a1
pdb|3MDV|B Chain B, Clotrimazole Complex Of Cytochrome P450 46a1
pdb|4ENH|A Chain A, Crystal Structure Of Human Cytochrome P450 Cyp46a1 With
Fluvoxamine Bound
pdb|4FIA|A Chain A, Crystal Structure Of Human Cyp46a1 P450 With Bicalutamide
Bound
Length = 456
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 84/380 (22%), Positives = 155/380 (40%), Gaps = 29/380 (7%)
Query: 50 GPVLPKAFHNLSTRNGPLVHFFIGSKPCVLASSPEMAKEFL---KTNESIFMNRPKTANL 106
G VL F + + + GP+V + K V+ +SPE K+FL K N+ M R
Sbjct: 9 GRVLQDVFLDWAKKYGPVVRVNVFHKTSVIVTSPESVKKFLMSTKYNKDSKMYRALQTVF 68
Query: 107 DYITYGSSDFATVHYGPYWKFIKKLCMTELLGGRTLDQLRPIREEETKRFLRLMLKKAEL 166
+G + +Y + K ++ + +L L E+ ++ + ++ KA+
Sbjct: 69 GERLFGQGLVSECNYERWHK--QRRVIDLAFSRSSLVSLMETFNEKAEQLVEILEAKADG 126
Query: 167 GEAVNFGGELMRLTNNVISRMTLGQRCSDSEDEAGEVRKLVKELNVLGAKFNLSDTIWLF 226
V+ L +++++ G S +LGA+ LS + L
Sbjct: 127 QTPVSMQDMLTYTAMDILAKAAFGMETS----------------MLLGAQKPLSQAVKLM 170
Query: 227 KN--FDXXXXXXXXXXDARDRYDVMME--RIIKEHEDERMKRKESGDGEGEIVKXXXXXX 282
R + + E R +++ + ++R+ GE V
Sbjct: 171 LEGITASRNTLAKFLPGKRKQLREVRESIRFLRQVGRDWVQRRREALKRGEEVPADILTQ 230
Query: 283 XXXXXXXNAEMRLTRENIKAFVMNIFGAGTDTSSITVEWGLAELINKPEVMEKARQEIDS 342
+ +N F F AG +TS+ + + + EL +PE++ + + E+D
Sbjct: 231 ILKAEEGAQDDEGLLDNFVTF----FIAGHETSANHLAFTVMELSRQPEIVARLQAEVDE 286
Query: 343 VVGKSRIVEESDIPSLPYMQAVVKEILRLHPTGPLVVRESSEDCTIADYRIPAKTRLFVN 402
V+G R ++ D+ L Y+ V+KE LRL+P R E+ I R+P T L +
Sbjct: 287 VIGSKRYLDFEDLGRLQYLSQVLKESLRLYPPAWGTFRLLEEETLIDGVRVPGNTPLLFS 346
Query: 403 LWSLGRDPNHWENPLEFRPE 422
+ +GR ++E+PL F P+
Sbjct: 347 TYVMGRMDTYFEDPLTFNPD 366
>pdb|3C6G|A Chain A, Crystal Structure Of Cyp2r1 In Complex With Vitamin D3
pdb|3C6G|B Chain B, Crystal Structure Of Cyp2r1 In Complex With Vitamin D3
pdb|3DL9|A Chain A, Crystal Structure Of Cyp2r1 In Complex With
1-Alpha-Hydroxy- Vitamin D2
pdb|3DL9|B Chain B, Crystal Structure Of Cyp2r1 In Complex With
1-Alpha-Hydroxy- Vitamin D2
Length = 479
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 68/129 (52%), Gaps = 1/129 (0%)
Query: 295 LTRENIKAFVMNIFGAGTDTSSITVEWGLAELINKPEVMEKARQEIDSVVGKSRIVEESD 354
++EN+ V + AGT+T++ + W + + P + + ++EID ++G + D
Sbjct: 269 FSKENLIFSVGELIIAGTETTTNVLRWAILFMALYPNIQGQVQKEIDLIMGPNGKPSWDD 328
Query: 355 IPSLPYMQAVVKEILRLHPTGPL-VVRESSEDCTIADYRIPAKTRLFVNLWSLGRDPNHW 413
+PY +AV+ E+LR PL + +SED + Y IP T + NL+S+ D +W
Sbjct: 329 KCKMPYTEAVLHEVLRFCNIVPLGIFHATSEDAVVRGYSIPKGTTVITNLYSVHFDEKYW 388
Query: 414 ENPLEFRPE 422
+P F PE
Sbjct: 389 RDPEVFHPE 397
>pdb|3CZH|A Chain A, Crystal Structure Of Cyp2r1 In Complex With Vitamin D2
pdb|3CZH|B Chain B, Crystal Structure Of Cyp2r1 In Complex With Vitamin D2
Length = 481
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 68/129 (52%), Gaps = 1/129 (0%)
Query: 295 LTRENIKAFVMNIFGAGTDTSSITVEWGLAELINKPEVMEKARQEIDSVVGKSRIVEESD 354
++EN+ V + AGT+T++ + W + + P + + ++EID ++G + D
Sbjct: 269 FSKENLIFSVGELIIAGTETTTNVLRWAILFMALYPNIQGQVQKEIDLIMGPNGKPSWDD 328
Query: 355 IPSLPYMQAVVKEILRLHPTGPL-VVRESSEDCTIADYRIPAKTRLFVNLWSLGRDPNHW 413
+PY +AV+ E+LR PL + +SED + Y IP T + NL+S+ D +W
Sbjct: 329 KCKMPYTEAVLHEVLRFCNIVPLGIFHATSEDAVVRGYSIPKGTTVITNLYSVHFDEKYW 388
Query: 414 ENPLEFRPE 422
+P F PE
Sbjct: 389 RDPEVFHPE 397
>pdb|1OG2|A Chain A, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG2|B Chain B, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG5|A Chain A, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG5|B Chain B, Structure Of Human Cytochrome P450 Cyp2c9
Length = 475
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 96/378 (25%), Positives = 155/378 (41%), Gaps = 29/378 (7%)
Query: 55 KAFHNLSTRNGPLVHFFIGSKPCVLASSPEMAKEFLKTNESIFMNRPKTANLDYITYGSS 114
K+ NLS GP+ + G KP V+ E KE L F R +
Sbjct: 33 KSLTNLSKVYGPVFTLYFGLKPIVVLHGYEAVKEALIDLGEEFSGR---GIFPLAERANR 89
Query: 115 DFATVHY-GPYWKFIKKLCMTEL----LGGRTLDQLRPIREEETKRFLRLMLKKAELGEA 169
F V G WK I++ + L +G R+++ R +E R L L+K +
Sbjct: 90 GFGIVFSNGKKWKEIRRFSLMTLRNFGMGKRSIED----RVQEEARCLVEELRKTK-ASP 144
Query: 170 VNFGGELMRLTNNVISRMTLGQRCSDSEDEA--GEVRKLVKELNVLGAKFNLSDTIWLFK 227
+ L NVI + +R D +D+ + KL + + +L + + I ++
Sbjct: 145 CDPTFILGCAPCNVICSIIFHKR-FDYKDQQFLNLMEKLNENIEILSSPW-----IQVYN 198
Query: 228 NFDXXXXXXXXXXDARDRYDVMMERIIKEHEDERMKRKESGDGEGEIVKXXXXXXXXXXX 287
NF + + M+ I E E +ES D
Sbjct: 199 NFPALLDYFPGTHNKLLKNVAFMKSYILEKVKEH---QESMDMNNPQDFIDCFLMKMEKE 255
Query: 288 XXNAEMRLTRENIKAFVMNIFGAGTDTSSITVEWGLAELINKPEVMEKARQEIDSVVGKS 347
N T E+++ +++FGAGT+T+S T+ + L L+ PEV K ++EI+ V+G++
Sbjct: 256 KHNQPSEFTIESLENTAVDLFGAGTETTSTTLRYALLLLLKHPEVTAKVQEEIERVIGRN 315
Query: 348 RIVEESDIPSLPYMQAVVKEILR---LHPTGPLVVRESSEDCTIADYRIPAKTRLFVNLW 404
R D +PY AVV E+ R L PT + + D +Y IP T + ++L
Sbjct: 316 RSPCMQDRSHMPYTDAVVHEVQRYIDLLPTS--LPHAVTCDIKFRNYLIPKGTTILISLT 373
Query: 405 SLGRDPNHWENPLEFRPE 422
S+ D + NP F P
Sbjct: 374 SVLHDNKEFPNPEMFDPH 391
>pdb|1R9O|A Chain A, Crystal Structure Of P4502c9 With Flurbiprofen Bound
Length = 477
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 98/376 (26%), Positives = 154/376 (40%), Gaps = 25/376 (6%)
Query: 55 KAFHNLSTRNGPLVHFFIGSKPCVLASSPEMAKEFLKTNESIFMNRPKTANLDYITYGSS 114
K+ NLS GP+ + G KP V+ E KE L F R +
Sbjct: 35 KSLTNLSKVYGPVFTLYFGLKPIVVLHGYEAVKEALIDLGEEFSGR---GIFPLAERANR 91
Query: 115 DFATVHY-GPYWKFIKKLCMTEL----LGGRTLDQLRPIREEETKRFLRLMLKKAELGEA 169
F V G WK I++ + L +G R+++ R +E R L L+K +
Sbjct: 92 GFGIVFSNGKKWKEIRRFSLMTLRNFGMGKRSIED----RVQEEARCLVEELRKTK-ASP 146
Query: 170 VNFGGELMRLTNNVISRMTLGQRCSDSEDEAGEVRKLVKELNVLGAKFNLSDTIWLFKNF 229
+ L NVI + +R D +D+ + L+++LN K S I + NF
Sbjct: 147 CDPTFILGCAPCNVICSIIFHKR-FDYKDQ--QFLNLMEKLNE-NIKILSSPWIQICNNF 202
Query: 230 DXXXXXXXXXXDARDRYDVMMERIIKEHEDERMKRKESGDGEGEIVKXXXXXXXXXXXXX 289
+ + M+ I E E +ES D
Sbjct: 203 SPIIDYFPGTHNKLLKNVAFMKSYILEKVKEH---QESMDMNNPQDFIDCFLMKMEKEKH 259
Query: 290 NAEMRLTRENIKAFVMNIFGAGTDTSSITVEWGLAELINKPEVMEKARQEIDSVVGKSRI 349
N T E+++ +++FGAGT+T+S T+ + L L+ PEV K ++EI+ V+G++R
Sbjct: 260 NQPSEFTIESLENTAVDLFGAGTETTSTTLRYALLLLLKHPEVTAKVQEEIERVIGRNRS 319
Query: 350 VEESDIPSLPYMQAVVKEILR---LHPTGPLVVRESSEDCTIADYRIPAKTRLFVNLWSL 406
D +PY AVV E+ R L PT + + D +Y IP T + ++L S+
Sbjct: 320 PCMQDRSHMPYTDAVVHEVQRYIDLLPTS--LPHAVTCDIKFRNYLIPKGTTILISLTSV 377
Query: 407 GRDPNHWENPLEFRPE 422
D + NP F P
Sbjct: 378 LHDNKEFPNPEMFDPH 393
>pdb|1W0E|A Chain A, Crystal Structure Of Human Cytochrome P450 3a4
pdb|1W0F|A Chain A, Crystal Structure Of Human Cytochrome P450 3a4
pdb|1W0G|A Chain A, Crystal Structure Of Human Cytochrome P450 3a4
pdb|2J0D|A Chain A, Crystal Structure Of Human P450 3a4 In Complex With
Erythromycin
pdb|2J0D|B Chain B, Crystal Structure Of Human P450 3a4 In Complex With
Erythromycin
pdb|2V0M|A Chain A, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|2V0M|B Chain B, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|2V0M|C Chain C, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|2V0M|D Chain D, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|3NXU|A Chain A, Crystal Structure Of Human Cytochrome P4503a4 Bound To An
Inhibitor Ritonavir
pdb|3NXU|B Chain B, Crystal Structure Of Human Cytochrome P4503a4 Bound To An
Inhibitor Ritonavir
Length = 485
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 82/366 (22%), Positives = 149/366 (40%), Gaps = 21/366 (5%)
Query: 63 RNGPLVHFFIGSKPCVLASSPEMAKEFL-KTNESIFMNRPKTANLDYITYGSSDFATVHY 121
+ G + F+ G +P + + P+M K L K S+F NR + ++ S +
Sbjct: 45 KYGKVWGFYDGQQPVLAITDPDMIKTVLVKECYSVFTNRRPFGPVGFMKSAIS----IAE 100
Query: 122 GPYWKFIKKLCMTELLGGRTLDQLRPIREEETKRFLRLMLKKAELGEAVNFGGELMRLTN 181
WK ++ L G+ L ++ PI + +R + ++AE G+ V +
Sbjct: 101 DEEWKRLRSLLSPTFTSGK-LKEMVPIIAQYGDVLVRNLRREAETGKPVTLKDVFGAYSM 159
Query: 182 NVISRMTLG---QRCSDSEDEAGEVRKLVKELNVLGAKFNLSDTIWLFKNFDXXXXXXXX 238
+VI+ + G ++ +D E K + + L F LS T++ F
Sbjct: 160 DVITSTSFGVNIDSLNNPQDPFVENTKKLLRFDFLDP-FFLSITVFPF--LIPILEVLNI 216
Query: 239 XXDARDRYDVMMERIIKEHEDERMKRKESGDGEGEIVKXXXXXXXXXXXXXNAEMRLTR- 297
R+ + + + + +RMK D + V +
Sbjct: 217 CVFPREVTNFLRKSV------KRMKESRLEDTQKHRVDFLQLMIDSQNSKETESHKALSD 270
Query: 298 -ENIKAFVMNIFGAGTDTSSITVEWGLAELINKPEVMEKARQEIDSVVGKSRIVEESDIP 356
E + ++ IF AG +T+S + + + EL P+V +K ++EID+V+ +
Sbjct: 271 LELVAQSIIFIF-AGYETTSSVLSFIMYELATHPDVQQKLQEEIDAVLPNKAPPTYDTVL 329
Query: 357 SLPYMQAVVKEILRLHPTGPLVVRESSEDCTIADYRIPAKTRLFVNLWSLGRDPNHWENP 416
+ Y+ VV E LRL P + R +D I IP + + ++L RDP +W P
Sbjct: 330 QMEYLDMVVNETLRLFPIAMRLERVCKKDVEINGMFIPKGVVVMIPSYALHRDPKYWTEP 389
Query: 417 LEFRPE 422
+F PE
Sbjct: 390 EKFLPE 395
>pdb|1TQN|A Chain A, Crystal Structure Of Human Microsomal P450 3a4
Length = 486
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 82/366 (22%), Positives = 149/366 (40%), Gaps = 21/366 (5%)
Query: 63 RNGPLVHFFIGSKPCVLASSPEMAKEFL-KTNESIFMNRPKTANLDYITYGSSDFATVHY 121
+ G + F+ G +P + + P+M K L K S+F NR + ++ S +
Sbjct: 46 KYGKVWGFYDGQQPVLAITDPDMIKTVLVKECYSVFTNRRPFGPVGFMKSAIS----IAE 101
Query: 122 GPYWKFIKKLCMTELLGGRTLDQLRPIREEETKRFLRLMLKKAELGEAVNFGGELMRLTN 181
WK ++ L G+ L ++ PI + +R + ++AE G+ V +
Sbjct: 102 DEEWKRLRSLLSPTFTSGK-LKEMVPIIAQYGDVLVRNLRREAETGKPVTLKDVFGAYSM 160
Query: 182 NVISRMTLG---QRCSDSEDEAGEVRKLVKELNVLGAKFNLSDTIWLFKNFDXXXXXXXX 238
+VI+ + G ++ +D E K + + L F LS T++ F
Sbjct: 161 DVITSTSFGVNIDSLNNPQDPFVENTKKLLRFDFLDP-FFLSITVFPF--LIPILEVLNI 217
Query: 239 XXDARDRYDVMMERIIKEHEDERMKRKESGDGEGEIVKXXXXXXXXXXXXXNAEMRLTR- 297
R+ + + + + +RMK D + V +
Sbjct: 218 CVFPREVTNFLRKSV------KRMKESRLEDTQKHRVDFLQLMIDSQNSKETESHKALSD 271
Query: 298 -ENIKAFVMNIFGAGTDTSSITVEWGLAELINKPEVMEKARQEIDSVVGKSRIVEESDIP 356
E + ++ IF AG +T+S + + + EL P+V +K ++EID+V+ +
Sbjct: 272 LELVAQSIIFIF-AGYETTSSVLSFIMYELATHPDVQQKLQEEIDAVLPNKAPPTYDTVL 330
Query: 357 SLPYMQAVVKEILRLHPTGPLVVRESSEDCTIADYRIPAKTRLFVNLWSLGRDPNHWENP 416
+ Y+ VV E LRL P + R +D I IP + + ++L RDP +W P
Sbjct: 331 QMEYLDMVVNETLRLFPIAMRLERVCKKDVEINGMFIPKGVVVMIPSYALHRDPKYWTEP 390
Query: 417 LEFRPE 422
+F PE
Sbjct: 391 EKFLPE 396
>pdb|3UA1|A Chain A, Crystal Structure Of The Cytochrome
P4503a4-Bromoergocryptine Complex
pdb|3TJS|A Chain A, Crystal Structure Of The Complex Between Human Cytochrome
P450 3a4 And Desthiazolylmethyloxycarbonyl Ritonavir
Length = 487
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 82/366 (22%), Positives = 149/366 (40%), Gaps = 21/366 (5%)
Query: 63 RNGPLVHFFIGSKPCVLASSPEMAKEFL-KTNESIFMNRPKTANLDYITYGSSDFATVHY 121
+ G + F+ G +P + + P+M K L K S+F NR + ++ S +
Sbjct: 47 KYGKVWGFYDGQQPVLAITDPDMIKTVLVKECYSVFTNRRPFGPVGFMKSAIS----IAE 102
Query: 122 GPYWKFIKKLCMTELLGGRTLDQLRPIREEETKRFLRLMLKKAELGEAVNFGGELMRLTN 181
WK ++ L G+ L ++ PI + +R + ++AE G+ V +
Sbjct: 103 DEEWKRLRSLLSPTFTSGK-LKEMVPIIAQYGDVLVRNLRREAETGKPVTLKDVFGAYSM 161
Query: 182 NVISRMTLG---QRCSDSEDEAGEVRKLVKELNVLGAKFNLSDTIWLFKNFDXXXXXXXX 238
+VI+ + G ++ +D E K + + L F LS T++ F
Sbjct: 162 DVITSTSFGVNIDSLNNPQDPFVENTKKLLRFDFLDP-FFLSITVFPF--LIPILEVLNI 218
Query: 239 XXDARDRYDVMMERIIKEHEDERMKRKESGDGEGEIVKXXXXXXXXXXXXXNAEMRLTR- 297
R+ + + + + +RMK D + V +
Sbjct: 219 CVFPREVTNFLRKSV------KRMKESRLEDTQKHRVDFLQLMIDSQNSKETESHKALSD 272
Query: 298 -ENIKAFVMNIFGAGTDTSSITVEWGLAELINKPEVMEKARQEIDSVVGKSRIVEESDIP 356
E + ++ IF AG +T+S + + + EL P+V +K ++EID+V+ +
Sbjct: 273 LELVAQSIIFIF-AGYETTSSVLSFIMYELATHPDVQQKLQEEIDAVLPNKAPPTYDTVL 331
Query: 357 SLPYMQAVVKEILRLHPTGPLVVRESSEDCTIADYRIPAKTRLFVNLWSLGRDPNHWENP 416
+ Y+ VV E LRL P + R +D I IP + + ++L RDP +W P
Sbjct: 332 QMEYLDMVVNETLRLFPIAMRLERVCKKDVEINGMFIPKGVVVMIPSYALHRDPKYWTEP 391
Query: 417 LEFRPE 422
+F PE
Sbjct: 392 EKFLPE 397
>pdb|3K9V|A Chain A, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Chaps
pdb|3K9V|B Chain B, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Chaps
pdb|3K9Y|A Chain A, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Cymal-5
pdb|3K9Y|B Chain B, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Cymal-5
Length = 482
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 70/128 (54%)
Query: 295 LTRENIKAFVMNIFGAGTDTSSITVEWGLAELINKPEVMEKARQEIDSVVGKSRIVEESD 354
L+++ + A V + A +T++ ++ W L L P+ + QE+ SV+ ++ D
Sbjct: 279 LSKKELYAAVTELQLAAVETTANSLMWILYNLSRNPQAQRRLLQEVQSVLPDNQTPRAED 338
Query: 355 IPSLPYMQAVVKEILRLHPTGPLVVRESSEDCTIADYRIPAKTRLFVNLWSLGRDPNHWE 414
+ ++PY++A +KE +RL P+ P R + + +Y +P T L +N LG +++E
Sbjct: 339 LRNMPYLKACLKESMRLTPSVPFTTRTLDKPTVLGEYALPKGTVLTLNTQVLGSSEDNFE 398
Query: 415 NPLEFRPE 422
+ +FRPE
Sbjct: 399 DSHKFRPE 406
>pdb|4DVQ|A Chain A, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|B Chain B, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|C Chain C, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|D Chain D, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|E Chain E, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|F Chain F, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|G Chain G, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|H Chain H, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|I Chain I, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|J Chain J, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|K Chain K, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|L Chain L, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4FDH|A Chain A, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|B Chain B, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|C Chain C, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|D Chain D, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|E Chain E, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|F Chain F, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|G Chain G, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|H Chain H, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|I Chain I, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|J Chain J, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|K Chain K, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|L Chain L, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
Length = 483
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/130 (34%), Positives = 68/130 (52%), Gaps = 4/130 (3%)
Query: 295 LTRENIKAFVMNIFGAGTDTSSITVEWGLAELINKPEVMEKARQEIDSVVGKSRIVE--E 352
L+ E IKA M + DT++ + L EL P+V + RQE S+ + I E +
Sbjct: 273 LSLEAIKANSMELTAGSVDTTAFPLLMTLFELARNPDVQQILRQE--SLAAAASISEHPQ 330
Query: 353 SDIPSLPYMQAVVKEILRLHPTGPLVVRESSEDCTIADYRIPAKTRLFVNLWSLGRDPNH 412
LP ++A +KE LRL+P G + R S D + +Y IPA T + V L+SLGR+
Sbjct: 331 KATTELPLLRAALKETLRLYPVGLFLERVVSSDLVLQNYHIPAGTLVQVFLYSLGRNAAL 390
Query: 413 WENPLEFRPE 422
+ P + P+
Sbjct: 391 FPRPERYNPQ 400
>pdb|4GQS|A Chain A, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
pdb|4GQS|B Chain B, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
pdb|4GQS|C Chain C, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
pdb|4GQS|D Chain D, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
Length = 477
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 46/135 (34%), Positives = 69/135 (51%), Gaps = 5/135 (3%)
Query: 290 NAEMRLTRENIKAFVMNIFGAGTDTSSITVEWGLAELINKPEVMEKARQEIDSVVGKSRI 349
N + T EN+ ++ GAGT+T+S T+ + L L+ PEV K ++EI+ VVG++R
Sbjct: 260 NQQSEFTIENLVITAADLLGAGTETTSTTLRYALLLLLKHPEVTAKVQEEIERVVGRNRS 319
Query: 350 VEESDIPSLPYMQAVVKEILR---LHPTGPLVVRESSEDCTIADYRIPAKTRLFVNLWSL 406
D +PY AVV E+ R L PT + + D +Y IP T + +L S+
Sbjct: 320 PCMQDRGHMPYTDAVVHEVQRYIDLIPTS--LPHAVTCDVKFRNYLIPKGTTILTSLTSV 377
Query: 407 GRDPNHWENPLEFRP 421
D + NP F P
Sbjct: 378 LHDNKEFPNPEMFDP 392
>pdb|1DT6|A Chain A, Structure Of Mammalian Cytochrome P450 2c5
pdb|1N6B|A Chain A, Microsomal Cytochrome P450 2c5/3lvdh Complex With A
Dimethyl Derivative Of Sulfaphenazole
pdb|1NR6|A Chain A, Microsomal Cytochrome P450 2c53LVDH COMPLEX WITH
DICLOFENAC
Length = 473
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 92/376 (24%), Positives = 147/376 (39%), Gaps = 30/376 (7%)
Query: 55 KAFHNLSTRNGPLVHFFIGSKPCVLASSPEMAKEFLKTNESIFMNRPKTANLDYITYGSS 114
K+ S GP+ ++G KP V+ E KE L F R L+ ++ G
Sbjct: 34 KSLTKFSECYGPVFTVYLGMKPTVVLHGYEAVKEALVDLGEEFAGRGSVPILEKVSKGLG 93
Query: 115 DFATVHYGPYWKFIKKLCMTEL----LGGRTLDQLRPIREEETKRFLRLMLKKAELGEAV 170
WK +++ + L +G R+++ R +E R L L+K
Sbjct: 94 --IAFSNAKTWKEMRRFSLMTLRNFGMGKRSIED----RIQEEARCLVEELRKTN-ASPC 146
Query: 171 NFGGELMRLTNNVISRMTLGQRCSDSEDEAGEVRKLVKELNVLGAKFNLSDTIWL--FKN 228
+ L NVI + R D +DE + +K + L L T WL + N
Sbjct: 147 DPTFILGCAPCNVICSVIFHNR-FDYKDE-----EFLKLMESLHENVELLGTPWLQVYNN 200
Query: 229 FDXXXXXXXXXXDARDRYDVMMERIIKEHEDERMKRKESGDGEGEIVKXXXXXXXXXXXX 288
F + ++ I E E K + + I
Sbjct: 201 FPALLDYFPGIHKTLLKNADYIKNFIMEKVKEHQKLLDVNNPRDFI------DCFLIKME 254
Query: 289 XNAEMRLTRENIKAFVMNIFGAGTDTSSITVEWGLAELINKPEVMEKARQEIDSVVGKSR 348
+ T E++ V ++FGAGT+T+S T+ + L L+ PEV + ++EI+ V+G+ R
Sbjct: 255 QENNLEFTLESLVIAVSDLFGAGTETTSTTLRYSLLLLLKHPEVAARVQEEIERVIGRHR 314
Query: 349 IVEESDIPSLPYMQAVVKEILR---LHPTGPLVVRESSEDCTIADYRIPAKTRLFVNLWS 405
D +PY AV+ EI R L PT + + D +Y IP T + +L S
Sbjct: 315 SPCMQDRSRMPYTDAVIHEIQRFIDLLPTN--LPHAVTRDVRFRNYFIPKGTDIITSLTS 372
Query: 406 LGRDPNHWENPLEFRP 421
+ D + NP F P
Sbjct: 373 VLHDEKAFPNPKVFDP 388
>pdb|3DBG|A Chain A, Crystal Structure Of Cytochrome P450 170a1 (Cyp170a1) From
Streptomyces Coelicolor
pdb|3DBG|B Chain B, Crystal Structure Of Cytochrome P450 170a1 (Cyp170a1) From
Streptomyces Coelicolor
pdb|3EL3|A Chain A, Distinct Monooxygenase And Farnesene Synthase Active Sites
In Cytochrome P450 170a1
pdb|3EL3|B Chain B, Distinct Monooxygenase And Farnesene Synthase Active Sites
In Cytochrome P450 170a1
Length = 467
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 67/125 (53%), Gaps = 1/125 (0%)
Query: 298 ENIKAFVMNIFGAGTDTSSITVEWGLAELINKPEVMEKARQEIDSVVGKSRIVEESDIPS 357
+ I V+ I G++T + T+ W L L + PE ++ R E+++V G R V D+
Sbjct: 262 QEIHDQVVAILTPGSETIASTIMWLLQALADHPEHADRIRDEVEAVTG-GRPVAFEDVRK 320
Query: 358 LPYMQAVVKEILRLHPTGPLVVRESSEDCTIADYRIPAKTRLFVNLWSLGRDPNHWENPL 417
L + V+ E +RL P ++ R + + + YRIPA + + +++ RDP +++ L
Sbjct: 321 LRHTGNVIVEAMRLRPAVWVLTRRAVAESELGGYRIPAGADIIYSPYAIQRDPKSYDDNL 380
Query: 418 EFRPE 422
EF P+
Sbjct: 381 EFDPD 385
>pdb|3EQM|A Chain A, Crystal Structure Of Human Placental Aromatase Cytochrome
P450 In Complex With Androstenedione
pdb|3S79|A Chain A, Human Placental Aromatase Cytochrome P450 (Cyp19a1)
Refined At 2.75 Angstrom
pdb|3S7S|A Chain A, Crystal Structure Of Human Placental Aromatase Complexed
With Breast Cancer Drug Exemestane
pdb|4GL5|A Chain A, Structure Of Human Placental Aromatase Complexed With
Designed Inhibitor Hddg029 (Compound 4)
pdb|4GL7|A Chain A, Structure Of Human Placental Aromatase Complexed With
Designed Inhibitor Hddg046 (Compound 5)
Length = 503
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 66/128 (51%), Gaps = 9/128 (7%)
Query: 295 LTRENIKAFVMNIFGAGTDTSSITVEWGLAELINKPEVMEKARQEIDSVVGKSRIVEESD 354
LTREN+ ++ + A DT S+++ + L + P V E +EI +V+G+ R ++ D
Sbjct: 291 LTRENVNQCILEMLIAAPDTMSVSLFFMLFLIAKHPNVEEAIIKEIQTVIGE-RDIKIDD 349
Query: 355 IPSLPYMQAVVKEILRLHPTGPLVVRESSEDCTIADYRIPAKTRLFVNLWSLGRDPNHWE 414
I L M+ + E +R P LV+R++ ED I Y + T + +N+ + R
Sbjct: 350 IQKLKVMENFIYESMRYQPVVDLVMRKALEDDVIDGYPVKKGTNIILNIGRMHR------ 403
Query: 415 NPLEFRPE 422
LEF P+
Sbjct: 404 --LEFFPK 409
>pdb|4DUB|A Chain A, Cytochrome P450 Bm3h-9d7 Mri Sensor Bound To Dopamine
pdb|4DUB|B Chain B, Cytochrome P450 Bm3h-9d7 Mri Sensor Bound To Dopamine
Length = 472
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 63/130 (48%), Gaps = 3/130 (2%)
Query: 295 LTRENIKAFVMNIFGAGTDTSSITVEWGLAELINKPEVMEKARQEIDSVVGKSRIVEESD 354
L ENI+ ++ AG + +S + + L L+ P V++KA +E V+ +
Sbjct: 250 LDDENIRYQIITFLAAGHEATSGLLSFALYFLVKNPHVLQKAAEEAARVLVDP-VPSYKQ 308
Query: 355 IPSLPYMQAVVKEILRLHPTGPLVVRESSEDCTI-ADYRIPAKTRLFVNLWSLGRDPNHW 413
+ L Y+ V+ E LRL PTGP + ED + +Y + L V + L RD W
Sbjct: 309 VKQLKYVGMVLNEALRLWPTGPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIW 368
Query: 414 ENPL-EFRPE 422
+ + EFRPE
Sbjct: 369 GDDVEEFRPE 378
>pdb|4DUA|A Chain A, Cytochrome P450 Bm3h-9d7 Mri Sensor, No Ligand
pdb|4DUA|B Chain B, Cytochrome P450 Bm3h-9d7 Mri Sensor, No Ligand
Length = 471
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 63/130 (48%), Gaps = 3/130 (2%)
Query: 295 LTRENIKAFVMNIFGAGTDTSSITVEWGLAELINKPEVMEKARQEIDSVVGKSRIVEESD 354
L ENI+ ++ AG + +S + + L L+ P V++KA +E V+ +
Sbjct: 249 LDDENIRYQIITFLAAGHEATSGLLSFALYFLVKNPHVLQKAAEEAARVLVDP-VPSYKQ 307
Query: 355 IPSLPYMQAVVKEILRLHPTGPLVVRESSEDCTI-ADYRIPAKTRLFVNLWSLGRDPNHW 413
+ L Y+ V+ E LRL PTGP + ED + +Y + L V + L RD W
Sbjct: 308 VKQLKYVGMVLNEALRLWPTGPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIW 367
Query: 414 ENPL-EFRPE 422
+ + EFRPE
Sbjct: 368 GDDVEEFRPE 377
>pdb|1EA1|A Chain A, Cytochrome P450 14 Alpha-Sterol Demethylase (Cyp51) From
Mycobacterium Tuberculosis In Complex With Fluconazole
pdb|1E9X|A Chain A, Cytochrome P450 14 Alpha-Sterol Demethylase (Cyp51) From
Mycobacterium Tuberculosis In Complex With 4-
Phenylimidazole
pdb|1H5Z|A Chain A, Cytochrome P450 14 Alpha-Sterol Demethylase (Cyp51) From
Mycobacterium Tuberculosis In Ferric Low-Spin State
Length = 455
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 60/128 (46%)
Query: 294 RLTRENIKAFVMNIFGAGTDTSSITVEWGLAELINKPEVMEKARQEIDSVVGKSRIVEES 353
R + + I +++ AG TSS T W L EL+ + E+D + G R V
Sbjct: 240 RFSADEITGMFISMMFAGHHTSSGTASWTLIELMRHRDAYAAVIDELDELYGDGRSVSFH 299
Query: 354 DIPSLPYMQAVVKEILRLHPTGPLVVRESSEDCTIADYRIPAKTRLFVNLWSLGRDPNHW 413
+ +P ++ V+KE LRLHP +++R + + + +RI + + R P +
Sbjct: 300 ALRQIPQLENVLKETLRLHPPLIILMRVAKGEFEVQGHRIHEGDLVAASPAISNRIPEDF 359
Query: 414 ENPLEFRP 421
+P +F P
Sbjct: 360 PDPHDFVP 367
>pdb|1X8V|A Chain A, Estriol-Bound And Ligand-Free Structures Of Sterol
14alpha- Demethylase (Cyp51)
pdb|2BZ9|A Chain A, Ligand-Free Structure Of Sterol 14alpha-Demethylase From
Mycobacterium Tuberculosis In P2(1) Space Group
pdb|2BZ9|B Chain B, Ligand-Free Structure Of Sterol 14alpha-Demethylase From
Mycobacterium Tuberculosis In P2(1) Space Group
pdb|2CI0|A Chain A, High Throughput Screening And X-Ray Crystallography
Assisted Evaluation Of Small Molecule Scaffolds For
Cyp51 Inhibitors
pdb|2CIB|A Chain A, High Throughput Screening And X-Ray Crystallography
Assisted Evaluation Of Small Molecule Scaffolds For
Cyp51 Inhibitors
pdb|2VKU|A Chain A, 4,4'-Dihydroxybenzophenone Mimics Sterol Substrate In The
Binding Site Of Sterol 14alpha-Demethylase (Cyp51) In
The X-Ray Structure Of The Complex
pdb|2W09|A Chain A, Cyp51 Of M. Tuberculosis Bound To An Inhibitor Cis-4-
Methyl-N-[(1s)-3-(Methylsulfanyl)-1-(Pyridin-4-
Ylcarbamoyl)propyl]cyclohexanecarboxamide
pdb|2W0B|A Chain A, Cyp51 Of M. Tuberculosis Bound To An Inhibitor 3-{[(4-
Methylphenyl)sulfonyl]amino}propyl Pyridin-4-Ylcarbamate
Length = 455
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 60/128 (46%)
Query: 294 RLTRENIKAFVMNIFGAGTDTSSITVEWGLAELINKPEVMEKARQEIDSVVGKSRIVEES 353
R + + I +++ AG TSS T W L EL+ + E+D + G R V
Sbjct: 240 RFSADEITGMFISMMFAGHHTSSGTASWTLIELMRHRDAYAAVIDELDELYGDGRSVSFH 299
Query: 354 DIPSLPYMQAVVKEILRLHPTGPLVVRESSEDCTIADYRIPAKTRLFVNLWSLGRDPNHW 413
+ +P ++ V+KE LRLHP +++R + + + +RI + + R P +
Sbjct: 300 ALRQIPQLENVLKETLRLHPPLIILMRVAKGEFEVQGHRIHEGDLVAASPAISNRIPEDF 359
Query: 414 ENPLEFRP 421
+P +F P
Sbjct: 360 PDPHDFVP 367
>pdb|2W0A|A Chain A, Cyp51 Of M. Tuberculosis Bound To An Inhibitor
N-[(1s)-2-Methyl-1-(Pyridin-4-Ylcarbamoyl)propyl]
Cyclohexanecarboxamide
Length = 455
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 60/128 (46%)
Query: 294 RLTRENIKAFVMNIFGAGTDTSSITVEWGLAELINKPEVMEKARQEIDSVVGKSRIVEES 353
R + + I +++ AG TSS T W L EL+ + E+D + G R V
Sbjct: 240 RFSADEITGMFISMMFAGHHTSSGTASWTLIELMRHRDAYAAVIDELDELYGDGRSVSFH 299
Query: 354 DIPSLPYMQAVVKEILRLHPTGPLVVRESSEDCTIADYRIPAKTRLFVNLWSLGRDPNHW 413
+ +P ++ V+KE LRLHP +++R + + + +RI + + R P +
Sbjct: 300 ALRQIPQLENVLKETLRLHPPLIILMRVAKGEFEVQGHRIHEGDLVAASPAISNRIPEDF 359
Query: 414 ENPLEFRP 421
+P +F P
Sbjct: 360 PDPHDFVP 367
>pdb|1U13|A Chain A, Crystal Structure Analysis Of The C37lC151TC442A-Triple
Mutant Of Cyp51 From Mycobacterium Tuberculosis
Length = 455
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 60/128 (46%)
Query: 294 RLTRENIKAFVMNIFGAGTDTSSITVEWGLAELINKPEVMEKARQEIDSVVGKSRIVEES 353
R + + I +++ AG TSS T W L EL+ + E+D + G R V
Sbjct: 240 RFSADEITGMFISMMFAGHHTSSGTASWTLIELMRHRDAYAAVIDELDELYGDGRSVSFH 299
Query: 354 DIPSLPYMQAVVKEILRLHPTGPLVVRESSEDCTIADYRIPAKTRLFVNLWSLGRDPNHW 413
+ +P ++ V+KE LRLHP +++R + + + +RI + + R P +
Sbjct: 300 ALRQIPQLENVLKETLRLHPPLIILMRVAKGEFEVQGHRIHEGDLVAASPAISNRIPEDF 359
Query: 414 ENPLEFRP 421
+P +F P
Sbjct: 360 PDPHDFVP 367
>pdb|2UWH|A Chain A, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|B Chain B, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|C Chain C, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|D Chain D, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|E Chain E, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|F Chain F, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
Length = 458
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 63/130 (48%), Gaps = 3/130 (2%)
Query: 295 LTRENIKAFVMNIFGAGTDTSSITVEWGLAELINKPEVMEKARQEIDSVVGKSRIVEESD 354
L ENI+ ++ AG +T+S + + L L+ P V++KA +E V+ +
Sbjct: 249 LDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDP-VPSYKQ 307
Query: 355 IPSLPYMQAVVKEILRLHPTGPLVVRESSEDCTI-ADYRIPAKTRLFVNLWSLGRDPNHW 413
+ L Y+ V+ E LRL PT P + ED + +Y + L V + L RD W
Sbjct: 308 VKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIW 367
Query: 414 ENPL-EFRPE 422
+ + EFRPE
Sbjct: 368 GDDVEEFRPE 377
>pdb|2BMH|A Chain A, Modeling Protein-Substrate Interactions In The Heme Domain
Of Cytochrome P450bm-3
pdb|2BMH|B Chain B, Modeling Protein-Substrate Interactions In The Heme Domain
Of Cytochrome P450bm-3
pdb|1BU7|A Chain A, Cryogenic Structure Of Cytochrome P450bm-3 Heme Domain
pdb|1BU7|B Chain B, Cryogenic Structure Of Cytochrome P450bm-3 Heme Domain
pdb|2J1M|A Chain A, P450 Bm3 Heme Domain In Complex With Dmso
pdb|2J1M|B Chain B, P450 Bm3 Heme Domain In Complex With Dmso
pdb|2J4S|A Chain A, P450 Bm3 Heme Domain In Complex With Dmso
pdb|2J4S|B Chain B, P450 Bm3 Heme Domain In Complex With Dmso
Length = 455
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 63/130 (48%), Gaps = 3/130 (2%)
Query: 295 LTRENIKAFVMNIFGAGTDTSSITVEWGLAELINKPEVMEKARQEIDSVVGKSRIVEESD 354
L ENI+ ++ AG +T+S + + L L+ P V++KA +E V+ +
Sbjct: 249 LDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDP-VPSYKQ 307
Query: 355 IPSLPYMQAVVKEILRLHPTGPLVVRESSEDCTI-ADYRIPAKTRLFVNLWSLGRDPNHW 413
+ L Y+ V+ E LRL PT P + ED + +Y + L V + L RD W
Sbjct: 308 VKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIW 367
Query: 414 ENPL-EFRPE 422
+ + EFRPE
Sbjct: 368 GDDVEEFRPE 377
>pdb|1BVY|A Chain A, Complex Of The Heme And Fmn-Binding Domains Of The
Cytochrome P450(Bm-3)
pdb|1BVY|B Chain B, Complex Of The Heme And Fmn-Binding Domains Of The
Cytochrome P450(Bm-3)
Length = 458
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 63/130 (48%), Gaps = 3/130 (2%)
Query: 295 LTRENIKAFVMNIFGAGTDTSSITVEWGLAELINKPEVMEKARQEIDSVVGKSRIVEESD 354
L ENI+ ++ AG +T+S + + L L+ P V++KA +E V+ +
Sbjct: 249 LDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDP-VPSYKQ 307
Query: 355 IPSLPYMQAVVKEILRLHPTGPLVVRESSEDCTI-ADYRIPAKTRLFVNLWSLGRDPNHW 413
+ L Y+ V+ E LRL PT P + ED + +Y + L V + L RD W
Sbjct: 308 VKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIW 367
Query: 414 ENPL-EFRPE 422
+ + EFRPE
Sbjct: 368 GDDVEEFRPE 377
>pdb|1P0X|A Chain A, F393y Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1P0X|B Chain B, F393y Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 63/130 (48%), Gaps = 3/130 (2%)
Query: 295 LTRENIKAFVMNIFGAGTDTSSITVEWGLAELINKPEVMEKARQEIDSVVGKSRIVEESD 354
L ENI+ ++ AG +T+S + + L L+ P V++KA +E V+ +
Sbjct: 249 LDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDP-VPSYKQ 307
Query: 355 IPSLPYMQAVVKEILRLHPTGPLVVRESSEDCTI-ADYRIPAKTRLFVNLWSLGRDPNHW 413
+ L Y+ V+ E LRL PT P + ED + +Y + L V + L RD W
Sbjct: 308 VKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIW 367
Query: 414 ENPL-EFRPE 422
+ + EFRPE
Sbjct: 368 GDDVEEFRPE 377
>pdb|1JME|A Chain A, Crystal Structure Of Phe393his Cytochrome P450 Bm3
pdb|1JME|B Chain B, Crystal Structure Of Phe393his Cytochrome P450 Bm3
Length = 455
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 63/130 (48%), Gaps = 3/130 (2%)
Query: 295 LTRENIKAFVMNIFGAGTDTSSITVEWGLAELINKPEVMEKARQEIDSVVGKSRIVEESD 354
L ENI+ ++ AG +T+S + + L L+ P V++KA +E V+ +
Sbjct: 249 LDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDP-VPSYKQ 307
Query: 355 IPSLPYMQAVVKEILRLHPTGPLVVRESSEDCTI-ADYRIPAKTRLFVNLWSLGRDPNHW 413
+ L Y+ V+ E LRL PT P + ED + +Y + L V + L RD W
Sbjct: 308 VKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIW 367
Query: 414 ENPL-EFRPE 422
+ + EFRPE
Sbjct: 368 GDDVEEFRPE 377
>pdb|1P0W|A Chain A, F393w Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1P0W|B Chain B, F393w Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 63/130 (48%), Gaps = 3/130 (2%)
Query: 295 LTRENIKAFVMNIFGAGTDTSSITVEWGLAELINKPEVMEKARQEIDSVVGKSRIVEESD 354
L ENI+ ++ AG +T+S + + L L+ P V++KA +E V+ +
Sbjct: 249 LDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDP-VPSYKQ 307
Query: 355 IPSLPYMQAVVKEILRLHPTGPLVVRESSEDCTI-ADYRIPAKTRLFVNLWSLGRDPNHW 413
+ L Y+ V+ E LRL PT P + ED + +Y + L V + L RD W
Sbjct: 308 VKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIW 367
Query: 414 ENPL-EFRPE 422
+ + EFRPE
Sbjct: 368 GDDVEEFRPE 377
>pdb|1P0V|A Chain A, F393a Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1P0V|B Chain B, F393a Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 63/130 (48%), Gaps = 3/130 (2%)
Query: 295 LTRENIKAFVMNIFGAGTDTSSITVEWGLAELINKPEVMEKARQEIDSVVGKSRIVEESD 354
L ENI+ ++ AG +T+S + + L L+ P V++KA +E V+ +
Sbjct: 249 LDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDP-VPSYKQ 307
Query: 355 IPSLPYMQAVVKEILRLHPTGPLVVRESSEDCTI-ADYRIPAKTRLFVNLWSLGRDPNHW 413
+ L Y+ V+ E LRL PT P + ED + +Y + L V + L RD W
Sbjct: 308 VKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIW 367
Query: 414 ENPL-EFRPE 422
+ + EFRPE
Sbjct: 368 GDDVEEFRPE 377
>pdb|2X7Y|A Chain A, P450 Bm3 F87a In Complex With Dmso
pdb|2X7Y|B Chain B, P450 Bm3 F87a In Complex With Dmso
pdb|2X80|A Chain A, P450 Bm3 F87a In Complex With Dmso
pdb|2X80|B Chain B, P450 Bm3 F87a In Complex With Dmso
Length = 455
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 63/130 (48%), Gaps = 3/130 (2%)
Query: 295 LTRENIKAFVMNIFGAGTDTSSITVEWGLAELINKPEVMEKARQEIDSVVGKSRIVEESD 354
L ENI+ ++ AG +T+S + + L L+ P V++KA +E V+ +
Sbjct: 249 LDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDP-VPSYKQ 307
Query: 355 IPSLPYMQAVVKEILRLHPTGPLVVRESSEDCTI-ADYRIPAKTRLFVNLWSLGRDPNHW 413
+ L Y+ V+ E LRL PT P + ED + +Y + L V + L RD W
Sbjct: 308 VKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIW 367
Query: 414 ENPL-EFRPE 422
+ + EFRPE
Sbjct: 368 GDDVEEFRPE 377
>pdb|1JPZ|A Chain A, Crystal Structure Of A Complex Of The Heme Domain Of
P450bm- 3 With N-Palmitoylglycine
pdb|1JPZ|B Chain B, Crystal Structure Of A Complex Of The Heme Domain Of
P450bm- 3 With N-Palmitoylglycine
pdb|1ZO9|A Chain A, Crystal Structure Of The Wild Type Heme Domain Of P450bm-3
With N- Palmitoylmethionine
pdb|1ZO9|B Chain B, Crystal Structure Of The Wild Type Heme Domain Of P450bm-3
With N- Palmitoylmethionine
Length = 473
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 63/130 (48%), Gaps = 3/130 (2%)
Query: 295 LTRENIKAFVMNIFGAGTDTSSITVEWGLAELINKPEVMEKARQEIDSVVGKSRIVEESD 354
L ENI+ ++ AG +T+S + + L L+ P V++KA +E V+ +
Sbjct: 252 LDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDP-VPSYKQ 310
Query: 355 IPSLPYMQAVVKEILRLHPTGPLVVRESSEDCTI-ADYRIPAKTRLFVNLWSLGRDPNHW 413
+ L Y+ V+ E LRL PT P + ED + +Y + L V + L RD W
Sbjct: 311 VKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIW 370
Query: 414 ENPL-EFRPE 422
+ + EFRPE
Sbjct: 371 GDDVEEFRPE 380
>pdb|3BEN|A Chain A, Structure Of N-(12-Imidazolyl-Dodecanoyl)-L-Leucine
Inhibitor Bound To The Heme Domain Of Cytochrome
P450-Bm3
pdb|3BEN|B Chain B, Structure Of N-(12-Imidazolyl-Dodecanoyl)-L-Leucine
Inhibitor Bound To The Heme Domain Of Cytochrome
P450-Bm3
Length = 470
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 63/130 (48%), Gaps = 3/130 (2%)
Query: 295 LTRENIKAFVMNIFGAGTDTSSITVEWGLAELINKPEVMEKARQEIDSVVGKSRIVEESD 354
L ENI+ ++ AG +T+S + + L L+ P V++KA +E V+ +
Sbjct: 250 LDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDP-VPSYKQ 308
Query: 355 IPSLPYMQAVVKEILRLHPTGPLVVRESSEDCTI-ADYRIPAKTRLFVNLWSLGRDPNHW 413
+ L Y+ V+ E LRL PT P + ED + +Y + L V + L RD W
Sbjct: 309 VKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIW 368
Query: 414 ENPL-EFRPE 422
+ + EFRPE
Sbjct: 369 GDDVEEFRPE 378
>pdb|2IJ2|A Chain A, Atomic Structure Of The Heme Domain Of Flavocytochrome
P450- Bm3
pdb|2IJ2|B Chain B, Atomic Structure Of The Heme Domain Of Flavocytochrome
P450- Bm3
Length = 470
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 63/130 (48%), Gaps = 3/130 (2%)
Query: 295 LTRENIKAFVMNIFGAGTDTSSITVEWGLAELINKPEVMEKARQEIDSVVGKSRIVEESD 354
L ENI+ ++ AG +T+S + + L L+ P V++KA +E V+ +
Sbjct: 249 LDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDP-VPSYKQ 307
Query: 355 IPSLPYMQAVVKEILRLHPTGPLVVRESSEDCTI-ADYRIPAKTRLFVNLWSLGRDPNHW 413
+ L Y+ V+ E LRL PT P + ED + +Y + L V + L RD W
Sbjct: 308 VKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIW 367
Query: 414 ENPL-EFRPE 422
+ + EFRPE
Sbjct: 368 GDDVEEFRPE 377
>pdb|2NNB|A Chain A, The Q403k Mutnat Heme Domain Of Flavocytochrome P450 Bm3
pdb|2NNB|B Chain B, The Q403k Mutnat Heme Domain Of Flavocytochrome P450 Bm3
Length = 471
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 63/130 (48%), Gaps = 3/130 (2%)
Query: 295 LTRENIKAFVMNIFGAGTDTSSITVEWGLAELINKPEVMEKARQEIDSVVGKSRIVEESD 354
L ENI+ ++ AG +T+S + + L L+ P V++KA +E V+ +
Sbjct: 249 LDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDP-VPSYKQ 307
Query: 355 IPSLPYMQAVVKEILRLHPTGPLVVRESSEDCTI-ADYRIPAKTRLFVNLWSLGRDPNHW 413
+ L Y+ V+ E LRL PT P + ED + +Y + L V + L RD W
Sbjct: 308 VKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIW 367
Query: 414 ENPL-EFRPE 422
+ + EFRPE
Sbjct: 368 GDDVEEFRPE 377
>pdb|2HPD|A Chain A, Crystal Structure Of Hemoprotein Domain Of P450bm-3, A
Prototype For Microsomal P450's
pdb|2HPD|B Chain B, Crystal Structure Of Hemoprotein Domain Of P450bm-3, A
Prototype For Microsomal P450's
pdb|1FAG|A Chain A, Structure Of Cytochrome P450
pdb|1FAG|B Chain B, Structure Of Cytochrome P450
pdb|1FAG|C Chain C, Structure Of Cytochrome P450
pdb|1FAG|D Chain D, Structure Of Cytochrome P450
Length = 471
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 63/130 (48%), Gaps = 3/130 (2%)
Query: 295 LTRENIKAFVMNIFGAGTDTSSITVEWGLAELINKPEVMEKARQEIDSVVGKSRIVEESD 354
L ENI+ ++ AG +T+S + + L L+ P V++KA +E V+ +
Sbjct: 249 LDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDP-VPSYKQ 307
Query: 355 IPSLPYMQAVVKEILRLHPTGPLVVRESSEDCTI-ADYRIPAKTRLFVNLWSLGRDPNHW 413
+ L Y+ V+ E LRL PT P + ED + +Y + L V + L RD W
Sbjct: 308 VKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIW 367
Query: 414 ENPL-EFRPE 422
+ + EFRPE
Sbjct: 368 GDDVEEFRPE 377
>pdb|3NPL|A Chain A, Structure Of Ru(Bpy)2(A-Phen)(K97c) P450 Bm3 Heme Domain,
A Ruthenium Modified P450 Bm3 Mutant
pdb|3NPL|B Chain B, Structure Of Ru(Bpy)2(A-Phen)(K97c) P450 Bm3 Heme Domain,
A Ruthenium Modified P450 Bm3 Mutant
Length = 470
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 63/130 (48%), Gaps = 3/130 (2%)
Query: 295 LTRENIKAFVMNIFGAGTDTSSITVEWGLAELINKPEVMEKARQEIDSVVGKSRIVEESD 354
L ENI+ ++ AG +T+S + + L L+ P V++KA +E V+ +
Sbjct: 250 LDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDP-VPSYKQ 308
Query: 355 IPSLPYMQAVVKEILRLHPTGPLVVRESSEDCTI-ADYRIPAKTRLFVNLWSLGRDPNHW 413
+ L Y+ V+ E LRL PT P + ED + +Y + L V + L RD W
Sbjct: 309 VKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIW 368
Query: 414 ENPL-EFRPE 422
+ + EFRPE
Sbjct: 369 GDDVEEFRPE 378
>pdb|3KX4|A Chain A, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
pdb|3KX4|B Chain B, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
Length = 470
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 63/130 (48%), Gaps = 3/130 (2%)
Query: 295 LTRENIKAFVMNIFGAGTDTSSITVEWGLAELINKPEVMEKARQEIDSVVGKSRIVEESD 354
L ENI+ ++ AG +T+S + + L L+ P V++KA +E V+ +
Sbjct: 249 LDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDP-VPSYKQ 307
Query: 355 IPSLPYMQAVVKEILRLHPTGPLVVRESSEDCTI-ADYRIPAKTRLFVNLWSLGRDPNHW 413
+ L Y+ V+ E LRL PT P + ED + +Y + L V + L RD W
Sbjct: 308 VKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIW 367
Query: 414 ENPL-EFRPE 422
+ + EFRPE
Sbjct: 368 GDDVEEFRPE 377
>pdb|3KX3|A Chain A, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
pdb|3KX3|B Chain B, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
Length = 470
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 63/130 (48%), Gaps = 3/130 (2%)
Query: 295 LTRENIKAFVMNIFGAGTDTSSITVEWGLAELINKPEVMEKARQEIDSVVGKSRIVEESD 354
L ENI+ ++ AG +T+S + + L L+ P V++KA +E V+ +
Sbjct: 249 LDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDP-VPSYKQ 307
Query: 355 IPSLPYMQAVVKEILRLHPTGPLVVRESSEDCTI-ADYRIPAKTRLFVNLWSLGRDPNHW 413
+ L Y+ V+ E LRL PT P + ED + +Y + L V + L RD W
Sbjct: 308 VKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIW 367
Query: 414 ENPL-EFRPE 422
+ + EFRPE
Sbjct: 368 GDDVEEFRPE 377
>pdb|1ZO4|A Chain A, Crystal Structure Of A328s Mutant Of The Heme Domain Of
P450bm-3
pdb|1ZO4|B Chain B, Crystal Structure Of A328s Mutant Of The Heme Domain Of
P450bm-3
Length = 473
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 63/130 (48%), Gaps = 3/130 (2%)
Query: 295 LTRENIKAFVMNIFGAGTDTSSITVEWGLAELINKPEVMEKARQEIDSVVGKSRIVEESD 354
L ENI+ ++ AG +T+S + + L L+ P V++KA +E V+ +
Sbjct: 252 LDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDP-VPSYKQ 310
Query: 355 IPSLPYMQAVVKEILRLHPTGPLVVRESSEDCTI-ADYRIPAKTRLFVNLWSLGRDPNHW 413
+ L Y+ V+ E LRL PT P + ED + +Y + L V + L RD W
Sbjct: 311 VKQLKYVGMVLNEALRLWPTSPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIW 370
Query: 414 ENPL-EFRPE 422
+ + EFRPE
Sbjct: 371 GDDVEEFRPE 380
>pdb|3HF2|A Chain A, Crystal Structure Of The I401p Mutant Of Cytochrome P450
Bm3
pdb|3HF2|B Chain B, Crystal Structure Of The I401p Mutant Of Cytochrome P450
Bm3
Length = 482
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 63/130 (48%), Gaps = 3/130 (2%)
Query: 295 LTRENIKAFVMNIFGAGTDTSSITVEWGLAELINKPEVMEKARQEIDSVVGKSRIVEESD 354
L ENI+ ++ AG +T+S + + L L+ P V++KA +E V+ +
Sbjct: 250 LDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDP-VPSYKQ 308
Query: 355 IPSLPYMQAVVKEILRLHPTGPLVVRESSEDCTI-ADYRIPAKTRLFVNLWSLGRDPNHW 413
+ L Y+ V+ E LRL PT P + ED + +Y + L V + L RD W
Sbjct: 309 VKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIW 368
Query: 414 ENPL-EFRPE 422
+ + EFRPE
Sbjct: 369 GDDVEEFRPE 378
>pdb|3M4V|A Chain A, Crystal Structure Of The A330p Mutant Of Cytochrome P450
Bm3
pdb|3M4V|B Chain B, Crystal Structure Of The A330p Mutant Of Cytochrome P450
Bm3
Length = 482
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 63/130 (48%), Gaps = 3/130 (2%)
Query: 295 LTRENIKAFVMNIFGAGTDTSSITVEWGLAELINKPEVMEKARQEIDSVVGKSRIVEESD 354
L ENI+ ++ AG +T+S + + L L+ P V++KA +E V+ +
Sbjct: 250 LDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDP-VPSYKQ 308
Query: 355 IPSLPYMQAVVKEILRLHPTGPLVVRESSEDCTI-ADYRIPAKTRLFVNLWSLGRDPNHW 413
+ L Y+ V+ E LRL PT P + ED + +Y + L V + L RD W
Sbjct: 309 VKQLKYVGMVLNEALRLWPTAPPFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIW 368
Query: 414 ENPL-EFRPE 422
+ + EFRPE
Sbjct: 369 GDDVEEFRPE 378
>pdb|4DUC|A Chain A, Cytochrome P450 Bm3h-2g9 Mri Sensor, No Ligand
pdb|4DUC|B Chain B, Cytochrome P450 Bm3h-2g9 Mri Sensor, No Ligand
Length = 472
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 63/130 (48%), Gaps = 3/130 (2%)
Query: 295 LTRENIKAFVMNIFGAGTDTSSITVEWGLAELINKPEVMEKARQEIDSVVGKSRIVEESD 354
L ENI+ ++ AG +++S + + L L+ P V++KA +E V+ +
Sbjct: 250 LDDENIRYQIITFLIAGHESTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDP-VPSYKQ 308
Query: 355 IPSLPYMQAVVKEILRLHPTGPLVVRESSEDCTI-ADYRIPAKTRLFVNLWSLGRDPNHW 413
+ L Y+ V+ E LRL PT P + ED + +Y + L V + L RD W
Sbjct: 309 VKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIW 368
Query: 414 ENPL-EFRPE 422
+ + EFRPE
Sbjct: 369 GDDVEEFRPE 378
>pdb|4DUF|A Chain A, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
pdb|4DUF|B Chain B, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
pdb|4DUF|C Chain C, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
pdb|4DUF|D Chain D, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
Length = 471
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 63/130 (48%), Gaps = 3/130 (2%)
Query: 295 LTRENIKAFVMNIFGAGTDTSSITVEWGLAELINKPEVMEKARQEIDSVVGKSRIVEESD 354
L ENI+ ++ AG +++S + + L L+ P V++KA +E V+ +
Sbjct: 249 LDDENIRYQIITFLIAGHESTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDP-VPSYKQ 307
Query: 355 IPSLPYMQAVVKEILRLHPTGPLVVRESSEDCTI-ADYRIPAKTRLFVNLWSLGRDPNHW 413
+ L Y+ V+ E LRL PT P + ED + +Y + L V + L RD W
Sbjct: 308 VKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIW 367
Query: 414 ENPL-EFRPE 422
+ + EFRPE
Sbjct: 368 GDDVEEFRPE 377
>pdb|4DUD|A Chain A, Cytochrome P450 Bm3h-2g9c6 Mri Sensor, No Ligand
pdb|4DUD|B Chain B, Cytochrome P450 Bm3h-2g9c6 Mri Sensor, No Ligand
pdb|4DUE|A Chain A, Cytochrome P450 Bm3h-2g9c6 Mri Sensor Bound To Serotonin
pdb|4DUE|B Chain B, Cytochrome P450 Bm3h-2g9c6 Mri Sensor Bound To Serotonin
Length = 471
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 63/130 (48%), Gaps = 3/130 (2%)
Query: 295 LTRENIKAFVMNIFGAGTDTSSITVEWGLAELINKPEVMEKARQEIDSVVGKSRIVEESD 354
L ENI+ ++ AG +++S + + L L+ P V++KA +E V+ +
Sbjct: 249 LDDENIRYQIITFLIAGHESTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDP-VPSYKQ 307
Query: 355 IPSLPYMQAVVKEILRLHPTGPLVVRESSEDCTI-ADYRIPAKTRLFVNLWSLGRDPNHW 413
+ L Y+ V+ E LRL PT P + ED + +Y + L V + L RD W
Sbjct: 308 VKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIW 367
Query: 414 ENPL-EFRPE 422
+ + EFRPE
Sbjct: 368 GDDVEEFRPE 377
>pdb|1ZOA|A Chain A, Crystal Structure Of A328v Mutant Of The Heme Domain Of
P450bm-3 With N-Palmitoylglycine
pdb|1ZOA|B Chain B, Crystal Structure Of A328v Mutant Of The Heme Domain Of
P450bm-3 With N-Palmitoylglycine
Length = 473
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 63/130 (48%), Gaps = 3/130 (2%)
Query: 295 LTRENIKAFVMNIFGAGTDTSSITVEWGLAELINKPEVMEKARQEIDSVVGKSRIVEESD 354
L ENI+ ++ AG +T+S + + L L+ P V++KA +E V+ +
Sbjct: 252 LDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDP-VPSYKQ 310
Query: 355 IPSLPYMQAVVKEILRLHPTGPLVVRESSEDCTI-ADYRIPAKTRLFVNLWSLGRDPNHW 413
+ L Y+ V+ E LRL PT P + ED + +Y + L V + L RD W
Sbjct: 311 VKQLKYVGMVLNEALRLWPTVPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIW 370
Query: 414 ENPL-EFRPE 422
+ + EFRPE
Sbjct: 371 GDDVEEFRPE 380
>pdb|3QI8|B Chain B, Evolved Variant Of Cytochrome P450 (Bm3, Cyp102a1)
pdb|3QI8|A Chain A, Evolved Variant Of Cytochrome P450 (Bm3, Cyp102a1)
Length = 472
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 63/130 (48%), Gaps = 3/130 (2%)
Query: 295 LTRENIKAFVMNIFGAGTDTSSITVEWGLAELINKPEVMEKARQEIDSVVGKSRIVEESD 354
L ENI+ ++ AG +T+S + + L L+ P V++KA +E V+ +
Sbjct: 250 LDDENIRYQIITFLIAGHETTSGLLTFALYFLVKNPHVLQKAAEEAARVLVDP-VPSYKQ 308
Query: 355 IPSLPYMQAVVKEILRLHPTGPLVVRESSEDCTI-ADYRIPAKTRLFVNLWSLGRDPNHW 413
+ L Y+ V+ E LR+ PT P + ED + +Y + L V + L RD W
Sbjct: 309 VKQLKYVGMVLNEALRIWPTAPAFSLYAKEDTMLGGEYPLEKGDELMVLIPQLHRDKTVW 368
Query: 414 ENPL-EFRPE 422
+ + EFRPE
Sbjct: 369 GDDVEEFRPE 378
>pdb|1YQO|A Chain A, T268a Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1YQO|B Chain B, T268a Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 62/130 (47%), Gaps = 3/130 (2%)
Query: 295 LTRENIKAFVMNIFGAGTDTSSITVEWGLAELINKPEVMEKARQEIDSVVGKSRIVEESD 354
L ENI+ ++ AG + +S + + L L+ P V++KA +E V+ +
Sbjct: 249 LDDENIRYQIITFLIAGHEATSGLLSFALYFLVKNPHVLQKAAEEAARVLVDP-VPSYKQ 307
Query: 355 IPSLPYMQAVVKEILRLHPTGPLVVRESSEDCTI-ADYRIPAKTRLFVNLWSLGRDPNHW 413
+ L Y+ V+ E LRL PT P + ED + +Y + L V + L RD W
Sbjct: 308 VKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIW 367
Query: 414 ENPL-EFRPE 422
+ + EFRPE
Sbjct: 368 GDDVEEFRPE 377
>pdb|3KX5|A Chain A, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
pdb|3KX5|B Chain B, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
Length = 470
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 63/130 (48%), Gaps = 3/130 (2%)
Query: 295 LTRENIKAFVMNIFGAGTDTSSITVEWGLAELINKPEVMEKARQEIDSVVGKSRIVEESD 354
L ENI+ ++ AG +T+S + + L L+ P V++KA +E V+ +
Sbjct: 249 LDDENIRYQIITELIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDP-VPSYKQ 307
Query: 355 IPSLPYMQAVVKEILRLHPTGPLVVRESSEDCTI-ADYRIPAKTRLFVNLWSLGRDPNHW 413
+ L Y+ V+ E LRL PT P + ED + +Y + L V + L RD W
Sbjct: 308 VKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIW 367
Query: 414 ENPL-EFRPE 422
+ + EFRPE
Sbjct: 368 GDDVEEFRPE 377
>pdb|1YQP|A Chain A, T268n Mutant Cytochrome Domain Of Flavocytochrome P450 Bm3
pdb|1YQP|B Chain B, T268n Mutant Cytochrome Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 62/130 (47%), Gaps = 3/130 (2%)
Query: 295 LTRENIKAFVMNIFGAGTDTSSITVEWGLAELINKPEVMEKARQEIDSVVGKSRIVEESD 354
L ENI+ ++ AG + +S + + L L+ P V++KA +E V+ +
Sbjct: 249 LDDENIRYQIITFLIAGHENTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDP-VPSYKQ 307
Query: 355 IPSLPYMQAVVKEILRLHPTGPLVVRESSEDCTI-ADYRIPAKTRLFVNLWSLGRDPNHW 413
+ L Y+ V+ E LRL PT P + ED + +Y + L V + L RD W
Sbjct: 308 VKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIW 367
Query: 414 ENPL-EFRPE 422
+ + EFRPE
Sbjct: 368 GDDVEEFRPE 377
>pdb|3DGI|A Chain A, Crystal Structure Of F87aT268A MUTANT OF CYP BM3
pdb|3DGI|B Chain B, Crystal Structure Of F87aT268A MUTANT OF CYP BM3
Length = 461
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 62/130 (47%), Gaps = 3/130 (2%)
Query: 295 LTRENIKAFVMNIFGAGTDTSSITVEWGLAELINKPEVMEKARQEIDSVVGKSRIVEESD 354
L ENI+ ++ AG + +S + + L L+ P V++KA +E V+ +
Sbjct: 249 LDDENIRYQIITFLIAGHEATSGLLSFALYFLVKNPHVLQKAAEEAARVLVDP-VPSYKQ 307
Query: 355 IPSLPYMQAVVKEILRLHPTGPLVVRESSEDCTI-ADYRIPAKTRLFVNLWSLGRDPNHW 413
+ L Y+ V+ E LRL PT P + ED + +Y + L V + L RD W
Sbjct: 308 VKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIW 367
Query: 414 ENPL-EFRPE 422
+ + EFRPE
Sbjct: 368 GDDVEEFRPE 377
>pdb|3EKB|A Chain A, Crystal Structure Of The A264c Mutant Heme Domain Of
Cytochrome P450 Bm3
pdb|3EKB|B Chain B, Crystal Structure Of The A264c Mutant Heme Domain Of
Cytochrome P450 Bm3
Length = 470
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 62/130 (47%), Gaps = 3/130 (2%)
Query: 295 LTRENIKAFVMNIFGAGTDTSSITVEWGLAELINKPEVMEKARQEIDSVVGKSRIVEESD 354
L ENI+ ++ G +T+S + + L L+ P V++KA +E V+ +
Sbjct: 249 LDDENIRYQIITFLICGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDP-VPSYKQ 307
Query: 355 IPSLPYMQAVVKEILRLHPTGPLVVRESSEDCTI-ADYRIPAKTRLFVNLWSLGRDPNHW 413
+ L Y+ V+ E LRL PT P + ED + +Y + L V + L RD W
Sbjct: 308 VKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIW 367
Query: 414 ENPL-EFRPE 422
+ + EFRPE
Sbjct: 368 GDDVEEFRPE 377
>pdb|1FAH|A Chain A, Structure Of Cytochrome P450
pdb|1FAH|B Chain B, Structure Of Cytochrome P450
Length = 471
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 62/130 (47%), Gaps = 3/130 (2%)
Query: 295 LTRENIKAFVMNIFGAGTDTSSITVEWGLAELINKPEVMEKARQEIDSVVGKSRIVEESD 354
L ENI+ ++ AG + +S + + L L+ P V++KA +E V+ +
Sbjct: 249 LDDENIRYQIITFLIAGHEATSGLLSFALYFLVKNPHVLQKAAEEAARVLVDP-VPSYKQ 307
Query: 355 IPSLPYMQAVVKEILRLHPTGPLVVRESSEDCTI-ADYRIPAKTRLFVNLWSLGRDPNHW 413
+ L Y+ V+ E LRL PT P + ED + +Y + L V + L RD W
Sbjct: 308 VKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIW 367
Query: 414 ENPL-EFRPE 422
+ + EFRPE
Sbjct: 368 GDDVEEFRPE 377
>pdb|2IJ4|A Chain A, Structure Of The A264k Mutant Of Cytochrome P450 Bm3
pdb|2IJ4|B Chain B, Structure Of The A264k Mutant Of Cytochrome P450 Bm3
Length = 470
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 62/130 (47%), Gaps = 3/130 (2%)
Query: 295 LTRENIKAFVMNIFGAGTDTSSITVEWGLAELINKPEVMEKARQEIDSVVGKSRIVEESD 354
L ENI+ ++ G +T+S + + L L+ P V++KA +E V+ +
Sbjct: 249 LDDENIRYQIITFLIKGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDP-VPSYKQ 307
Query: 355 IPSLPYMQAVVKEILRLHPTGPLVVRESSEDCTI-ADYRIPAKTRLFVNLWSLGRDPNHW 413
+ L Y+ V+ E LRL PT P + ED + +Y + L V + L RD W
Sbjct: 308 VKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIW 367
Query: 414 ENPL-EFRPE 422
+ + EFRPE
Sbjct: 368 GDDVEEFRPE 377
>pdb|3EKF|A Chain A, Crystal Structure Of The A264q Heme Domain Of Cytochrome
P450 Bm3
pdb|3EKF|B Chain B, Crystal Structure Of The A264q Heme Domain Of Cytochrome
P450 Bm3
Length = 470
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 62/130 (47%), Gaps = 3/130 (2%)
Query: 295 LTRENIKAFVMNIFGAGTDTSSITVEWGLAELINKPEVMEKARQEIDSVVGKSRIVEESD 354
L ENI+ ++ G +T+S + + L L+ P V++KA +E V+ +
Sbjct: 249 LDDENIRYQIITFLIQGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDP-VPSYKQ 307
Query: 355 IPSLPYMQAVVKEILRLHPTGPLVVRESSEDCTI-ADYRIPAKTRLFVNLWSLGRDPNHW 413
+ L Y+ V+ E LRL PT P + ED + +Y + L V + L RD W
Sbjct: 308 VKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIW 367
Query: 414 ENPL-EFRPE 422
+ + EFRPE
Sbjct: 368 GDDVEEFRPE 377
>pdb|3PSX|A Chain A, Crystal Structure Of The Kt2 Mutant Of Cytochrome P450 Bm3
pdb|3PSX|B Chain B, Crystal Structure Of The Kt2 Mutant Of Cytochrome P450 Bm3
Length = 487
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 63/130 (48%), Gaps = 3/130 (2%)
Query: 295 LTRENIKAFVMNIFGAGTDTSSITVEWGLAELINKPEVMEKARQEIDSVVGKSRIVEESD 354
L ENI+ ++ AG +T+S + + L L+ P V++KA +E V+ +
Sbjct: 255 LDDENIRYQIVTFLIAGHETTSGLLSFTLYFLVKNPHVLQKAAEEAARVLVDP-VPSYKQ 313
Query: 355 IPSLPYMQAVVKEILRLHPTGPLVVRESSEDCTI-ADYRIPAKTRLFVNLWSLGRDPNHW 413
+ L Y+ V+ E LRL PT P + ED + +Y + + V + L RD W
Sbjct: 314 VKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDEIMVLIPQLHRDKTIW 373
Query: 414 ENPL-EFRPE 422
+ + EFRPE
Sbjct: 374 GDDVEEFRPE 383
>pdb|4DU2|B Chain B, Cytochrome P450 Bm3h-B7 Mri Sensor Bound To Dopamine
pdb|4DU2|A Chain A, Cytochrome P450 Bm3h-B7 Mri Sensor Bound To Dopamine
Length = 470
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 61/130 (46%), Gaps = 3/130 (2%)
Query: 295 LTRENIKAFVMNIFGAGTDTSSITVEWGLAELINKPEVMEKARQEIDSVVGKSRIVEESD 354
L ENI+ ++ AG + +S + + L L+ P ++KA +E V+ +
Sbjct: 250 LDDENIRYQIITFLAAGHEATSGLLSFALYFLVKNPHELQKAAEEAARVLVDP-VPSHKQ 308
Query: 355 IPSLPYMQAVVKEILRLHPTGPLVVRESSEDCTI-ADYRIPAKTRLFVNLWSLGRDPNHW 413
+ L Y+ V+ E LRL PT P + ED + +Y + L V + L RD W
Sbjct: 309 VKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTVW 368
Query: 414 ENPL-EFRPE 422
+ + EFRPE
Sbjct: 369 GDDVEEFRPE 378
>pdb|3EKD|A Chain A, Crystal Structure Of The A264m Heme Domain Of Cytochrome
P450 Bm3
pdb|3EKD|B Chain B, Crystal Structure Of The A264m Heme Domain Of Cytochrome
P450 Bm3
Length = 470
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 62/130 (47%), Gaps = 3/130 (2%)
Query: 295 LTRENIKAFVMNIFGAGTDTSSITVEWGLAELINKPEVMEKARQEIDSVVGKSRIVEESD 354
L ENI+ ++ G +T+S + + L L+ P V++KA +E V+ +
Sbjct: 249 LDDENIRYQIITFLIMGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDP-VPSYKQ 307
Query: 355 IPSLPYMQAVVKEILRLHPTGPLVVRESSEDCTI-ADYRIPAKTRLFVNLWSLGRDPNHW 413
+ L Y+ V+ E LRL PT P + ED + +Y + L V + L RD W
Sbjct: 308 VKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIW 367
Query: 414 ENPL-EFRPE 422
+ + EFRPE
Sbjct: 368 GDDVEEFRPE 377
>pdb|2IJ3|A Chain A, Structure Of The A264h Mutant Of Cytochrome P450 Bm3
pdb|2IJ3|B Chain B, Structure Of The A264h Mutant Of Cytochrome P450 Bm3
Length = 470
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 62/130 (47%), Gaps = 3/130 (2%)
Query: 295 LTRENIKAFVMNIFGAGTDTSSITVEWGLAELINKPEVMEKARQEIDSVVGKSRIVEESD 354
L ENI+ ++ G +T+S + + L L+ P V++KA +E V+ +
Sbjct: 249 LDDENIRYQIITFLIHGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDP-VPSYKQ 307
Query: 355 IPSLPYMQAVVKEILRLHPTGPLVVRESSEDCTI-ADYRIPAKTRLFVNLWSLGRDPNHW 413
+ L Y+ V+ E LRL PT P + ED + +Y + L V + L RD W
Sbjct: 308 VKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIW 367
Query: 414 ENPL-EFRPE 422
+ + EFRPE
Sbjct: 368 GDDVEEFRPE 377
>pdb|1SMI|A Chain A, A Single Mutation Of P450 Bm3 Induces The Conformational
Rearrangement Seen Upon Substrate-Binding In Wild-Type
Enzyme
pdb|1SMI|B Chain B, A Single Mutation Of P450 Bm3 Induces The Conformational
Rearrangement Seen Upon Substrate-Binding In Wild-Type
Enzyme
pdb|1SMJ|A Chain A, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
pdb|1SMJ|B Chain B, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
pdb|1SMJ|C Chain C, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
pdb|1SMJ|D Chain D, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
Length = 471
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 62/130 (47%), Gaps = 3/130 (2%)
Query: 295 LTRENIKAFVMNIFGAGTDTSSITVEWGLAELINKPEVMEKARQEIDSVVGKSRIVEESD 354
L ENI+ ++ G +T+S + + L L+ P V++KA +E V+ +
Sbjct: 249 LDDENIRYQIITFLIEGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDP-VPSYKQ 307
Query: 355 IPSLPYMQAVVKEILRLHPTGPLVVRESSEDCTI-ADYRIPAKTRLFVNLWSLGRDPNHW 413
+ L Y+ V+ E LRL PT P + ED + +Y + L V + L RD W
Sbjct: 308 VKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIW 367
Query: 414 ENPL-EFRPE 422
+ + EFRPE
Sbjct: 368 GDDVEEFRPE 377
>pdb|4DTW|B Chain B, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Serotonin
pdb|4DTW|A Chain A, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Serotonin
pdb|4DTY|B Chain B, Cytochrome P450 Bm3h-8c8 Mri Sensor, No Ligand
pdb|4DTY|A Chain A, Cytochrome P450 Bm3h-8c8 Mri Sensor, No Ligand
pdb|4DTZ|A Chain A, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Dopamine
pdb|4DTZ|B Chain B, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Dopamine
Length = 469
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 61/130 (46%), Gaps = 3/130 (2%)
Query: 295 LTRENIKAFVMNIFGAGTDTSSITVEWGLAELINKPEVMEKARQEIDSVVGKSRIVEESD 354
L ENI+ ++ AG + +S + + L L+ P ++KA +E V+ +
Sbjct: 249 LDDENIRYQIITFLAAGHEATSGLLSFALYFLVKNPHELQKAAEEAARVLVDP-VPSYKQ 307
Query: 355 IPSLPYMQAVVKEILRLHPTGPLVVRESSEDCTI-ADYRIPAKTRLFVNLWSLGRDPNHW 413
+ L Y+ V+ E LRL PT P + ED + +Y + L V + L RD W
Sbjct: 308 VKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIW 367
Query: 414 ENPL-EFRPE 422
+ + EFRPE
Sbjct: 368 GDDVEEFRPE 377
>pdb|3AWP|A Chain A, Cytochrome P450sp Alpha (Cyp152b1) Mutant F288g
Length = 415
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 67/160 (41%), Gaps = 38/160 (23%)
Query: 294 RLTRENIKAFVMNIF--------GAGTDTSSITVEW-------------GLAELIN--KP 330
RL R + A+ I G+G+ T++ + W EL+N +P
Sbjct: 183 RLARRRVDAWAKRIIEGIRAGSIGSGSGTAAYAIAWHRDRHDDLLSPHVAAVELVNVLRP 242
Query: 331 EV--------MEKARQEIDSVVGKSRIVEESDIPSLPYMQAVVKEILRLHPTGPLVVRES 382
V + A Q + ++ +V++ D Y + V+E+ R +P GP VV +
Sbjct: 243 TVAIAVYITFVAHALQTCSGI--RAALVQQPD-----YAELFVQEVRRFYPFGPAVVARA 295
Query: 383 SEDCTIADYRIPAKTRLFVNLWSLGRDPNHWENPLEFRPE 422
S+D P ++ ++L+ D W +P EFRPE
Sbjct: 296 SQDFEWEGMAFPEGRQVVLDLYGSNHDAATWADPQEFRPE 335
>pdb|3CBD|A Chain A, Directed Evolution Of Cytochrome P450 Bm3, To Octane
Monoxygenase 139-3
pdb|3CBD|B Chain B, Directed Evolution Of Cytochrome P450 Bm3, To Octane
Monoxygenase 139-3
Length = 455
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 59/126 (46%), Gaps = 3/126 (2%)
Query: 299 NIKAFVMNIFGAGTDTSSITVEWGLAELINKPEVMEKARQEIDSVVGKSRIVEESDIPSL 358
NI ++ AG +T+S + + L L+ P V++K +E V+ + + L
Sbjct: 253 NISYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKVAEEATRVLVDP-VPSYKQVKQL 311
Query: 359 PYMQAVVKEILRLHPTGPLVVRESSEDCTI-ADYRIPAKTRLFVNLWSLGRDPNHWENPL 417
Y+ V+ E LRL PT P + ED + +Y + + V + L RD W + +
Sbjct: 312 KYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDEVMVLIPQLHRDKTIWGDDV 371
Query: 418 -EFRPE 422
EFRPE
Sbjct: 372 EEFRPE 377
>pdb|3VM4|A Chain A, Cytochrome P450sp Alpha (Cyp152b1) In Complex With
(R)-Ibuprophen
Length = 407
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 66/160 (41%), Gaps = 38/160 (23%)
Query: 294 RLTRENIKAFVMNIF--------GAGTDTSSITVEW-------------GLAELIN--KP 330
RL R + A+ I G+G+ T++ + W EL+N +P
Sbjct: 175 RLARRRVDAWAKRIIEGIRAGSIGSGSGTAAYAIAWHRDRHDDLLSPHVAAVELVNVLRP 234
Query: 331 EV--------MEKARQEIDSVVGKSRIVEESDIPSLPYMQAVVKEILRLHPTGPLVVRES 382
V + A Q + ++ +V++ D Y + V+E+ R +P P VV +
Sbjct: 235 TVAIAVYITFVAHALQTCSGI--RAALVQQPD-----YAELFVQEVRRFYPFFPAVVARA 287
Query: 383 SEDCTIADYRIPAKTRLFVNLWSLGRDPNHWENPLEFRPE 422
S+D P ++ ++L+ D W +P EFRPE
Sbjct: 288 SQDFEWEGMAFPEGRQVVLDLYGSNHDAATWADPQEFRPE 327
>pdb|3AWM|A Chain A, Cytochrome P450sp Alpha (Cyp152b1) Wild-Type With Palmitic
Acid
Length = 415
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 66/160 (41%), Gaps = 38/160 (23%)
Query: 294 RLTRENIKAFVMNIF--------GAGTDTSSITVEW-------------GLAELIN--KP 330
RL R + A+ I G+G+ T++ + W EL+N +P
Sbjct: 183 RLARRRVDAWAKRIIEGIRAGSIGSGSGTAAYAIAWHRDRHDDLLSPHVAAVELVNVLRP 242
Query: 331 EV--------MEKARQEIDSVVGKSRIVEESDIPSLPYMQAVVKEILRLHPTGPLVVRES 382
V + A Q + ++ +V++ D Y + V+E+ R +P P VV +
Sbjct: 243 TVAIAVYITFVAHALQTCSGI--RAALVQQPD-----YAELFVQEVRRFYPFFPAVVARA 295
Query: 383 SEDCTIADYRIPAKTRLFVNLWSLGRDPNHWENPLEFRPE 422
S+D P ++ ++L+ D W +P EFRPE
Sbjct: 296 SQDFEWEGMAFPEGRQVVLDLYGSNHDAATWADPQEFRPE 335
>pdb|3VOO|A Chain A, Cytochrome P450sp Alpha (cyp152b1) Mutant A245e
Length = 407
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 66/160 (41%), Gaps = 38/160 (23%)
Query: 294 RLTRENIKAFVMNIF--------GAGTDTSSITVEW-------------GLAELIN--KP 330
RL R + A+ I G+G+ T++ + W EL+N +P
Sbjct: 175 RLARRRVDAWAKRIIEGIRAGSIGSGSGTAAYAIAWHRDRHDDLLSPHVAAVELVNVLRP 234
Query: 331 EV--------MEKARQEIDSVVGKSRIVEESDIPSLPYMQAVVKEILRLHPTGPLVVRES 382
V + A Q + ++ +V++ D Y + V+E+ R +P P VV +
Sbjct: 235 TVEIAVYITFVAHALQTCSGI--RAALVQQPD-----YAELFVQEVRRFYPFFPAVVARA 287
Query: 383 SEDCTIADYRIPAKTRLFVNLWSLGRDPNHWENPLEFRPE 422
S+D P ++ ++L+ D W +P EFRPE
Sbjct: 288 SQDFEWEGMAFPEGRQVVLDLYGSNHDAATWADPQEFRPE 327
>pdb|3AWQ|A Chain A, Cytochrome P450sp Alpha (Cyp152b1) Mutant L78f
Length = 415
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 66/160 (41%), Gaps = 38/160 (23%)
Query: 294 RLTRENIKAFVMNIF--------GAGTDTSSITVEW-------------GLAELIN--KP 330
RL R + A+ I G+G+ T++ + W EL+N +P
Sbjct: 183 RLARRRVDAWAKRIIEGIRAGSIGSGSGTAAYAIAWHRDRHDDLLSPHVAAVELVNVLRP 242
Query: 331 EV--------MEKARQEIDSVVGKSRIVEESDIPSLPYMQAVVKEILRLHPTGPLVVRES 382
V + A Q + ++ +V++ D Y + V+E+ R +P P VV +
Sbjct: 243 TVAIAVYITFVAHALQTCSGI--RAALVQQPD-----YAELFVQEVRRFYPFFPAVVARA 295
Query: 383 SEDCTIADYRIPAKTRLFVNLWSLGRDPNHWENPLEFRPE 422
S+D P ++ ++L+ D W +P EFRPE
Sbjct: 296 SQDFEWEGMAFPEGRQVVLDLYGSNHDAATWADPQEFRPE 335
>pdb|3NC3|A Chain A, Cyp134a1 Structure With A Closed Substrate Binding Loop
pdb|3NC3|B Chain B, Cyp134a1 Structure With A Closed Substrate Binding Loop
pdb|3NC5|A Chain A, Cyp134a1 Structure With An Open Substrate Binding Loop
pdb|3NC5|B Chain B, Cyp134a1 Structure With An Open Substrate Binding Loop
pdb|3NC6|A Chain A, Cyp134a1 1-Phenylimidazole Bound Structure
pdb|3NC6|B Chain B, Cyp134a1 1-Phenylimidazole Bound Structure
pdb|3NC7|A Chain A, Cyp134a1 2-Phenylimidazole Bound Structure
pdb|3NC7|B Chain B, Cyp134a1 2-Phenylimidazole Bound Structure
Length = 441
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 55/127 (43%), Gaps = 18/127 (14%)
Query: 293 MRLTRENIKAFVMNIFGAGTDTSSITVEWGLAELINKPEVMEKARQEIDSVVGKSRIVEE 352
M L+ ++I A ++N+ A T+ + T+ + L+N PE M + +
Sbjct: 252 MALSDKDILALILNVLLAATEPADKTLALMIYHLLNNPEQMNDV------------LADR 299
Query: 353 SDIPSLPYMQAVVKEILRLHPTGPLVVRESSEDCTIADYRIPAKTRLFVNLWSLGRDPNH 412
S +P + E LR P L+ R+ S+D + I T +F + + RDP
Sbjct: 300 SLVPR------AIAETLRYKPPVQLIPRQLSQDTVVGGMEIKKDTIVFCMIGAANRDPEA 353
Query: 413 WENPLEF 419
+E P F
Sbjct: 354 FEQPDVF 360
>pdb|3VNO|A Chain A, Cytochrome P450sp Alpha (cyp152b1) Mutant R241e
Length = 407
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 66/160 (41%), Gaps = 38/160 (23%)
Query: 294 RLTRENIKAFVMNIF--------GAGTDTSSITVEW-------------GLAELIN--KP 330
RL R + A+ I G+G+ T++ + W EL+N +P
Sbjct: 175 RLARRRVDAWAKRIIEGIRAGSIGSGSGTAAYAIAWHRDRHDDLLSPHVAAVELVNVLEP 234
Query: 331 EV--------MEKARQEIDSVVGKSRIVEESDIPSLPYMQAVVKEILRLHPTGPLVVRES 382
V + A Q + ++ +V++ D Y + V+E+ R +P P VV +
Sbjct: 235 TVAIAVYITFVAHALQTCSGI--RAALVQQPD-----YAELFVQEVRRFYPFFPAVVARA 287
Query: 383 SEDCTIADYRIPAKTRLFVNLWSLGRDPNHWENPLEFRPE 422
S+D P ++ ++L+ D W +P EFRPE
Sbjct: 288 SQDFEWEGMAFPEGRQVVLDLYGSNHDAATWADPQEFRPE 327
>pdb|2VE3|A Chain A, Retinoic Acid Bound Cyanobacterial Cyp120a1
pdb|2VE3|B Chain B, Retinoic Acid Bound Cyanobacterial Cyp120a1
pdb|2VE4|A Chain A, Substrate Free Cyanobacterial Cyp120a1
pdb|2VE4|B Chain B, Substrate Free Cyanobacterial Cyp120a1
Length = 444
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/128 (23%), Positives = 59/128 (46%), Gaps = 1/128 (0%)
Query: 295 LTRENIKAFVMNIFGAGTDTSSITVEWGLAELINKPEVMEKARQEIDSVVGKSRIVEESD 354
L+ +K ++ + AG +T + + L ++ E+ RQE + + + E+
Sbjct: 239 LSLPELKDQILLLLFAGHETLTSALSSFCLLLGQHSDIRERVRQEQNKLQLSQELTAET- 297
Query: 355 IPSLPYMQAVVKEILRLHPTGPLVVRESSEDCTIADYRIPAKTRLFVNLWSLGRDPNHWE 414
+ +PY+ V++E+LRL P RE +DC + P + + DP+ +
Sbjct: 298 LKKMPYLDQVLQEVLRLIPPVGGGFRELIQDCQFQGFHFPKGWLVSYQISQTHADPDLYP 357
Query: 415 NPLEFRPE 422
+P +F PE
Sbjct: 358 DPEKFDPE 365
>pdb|3DAX|A Chain A, Crystal Structure Of Human Cyp7a1
pdb|3DAX|B Chain B, Crystal Structure Of Human Cyp7a1
Length = 491
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/137 (24%), Positives = 64/137 (46%), Gaps = 16/137 (11%)
Query: 298 ENIKAFVMNIFGAGTDTSSITVEWGLAELINKPEVMEKARQEID----------SVVGKS 347
E K ++ ++ + +T T W L ++I PE M+ A +E+ S+ G
Sbjct: 257 EKAKTHLVVLWASQANTIPATF-WSLFQMIRNPEAMKAATEEVKRTLENAGQKVSLEGNP 315
Query: 348 RIVEESDIPSLPYMQAVVKEILRLHPTGPLVVRESSEDCTI----ADYRIPAKTRLFVNL 403
+ ++++ LP + +++KE LRL + L +R + ED T+ Y I + +
Sbjct: 316 ICLSQAELNDLPVLDSIIKESLRL-SSASLNIRTAKEDFTLHLEDGSYNIRKDDIIALYP 374
Query: 404 WSLGRDPNHWENPLEFR 420
+ DP + +PL F+
Sbjct: 375 QLMHLDPEIYPDPLTFK 391
>pdb|3SN5|A Chain A, Crystal Structure Of Human Cyp7a1 In Complex With
Cholest-4-En-3-One
pdb|3SN5|B Chain B, Crystal Structure Of Human Cyp7a1 In Complex With
Cholest-4-En-3-One
pdb|3V8D|A Chain A, Crystal Structure Of Human Cyp7a1 In Complex With
7-Ketocholesterol
pdb|3V8D|B Chain B, Crystal Structure Of Human Cyp7a1 In Complex With
7-Ketocholesterol
Length = 491
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/137 (24%), Positives = 64/137 (46%), Gaps = 16/137 (11%)
Query: 298 ENIKAFVMNIFGAGTDTSSITVEWGLAELINKPEVMEKARQEID----------SVVGKS 347
E K ++ ++ + +T T W L ++I PE M+ A +E+ S+ G
Sbjct: 257 EKAKTHLVVLWASQANTIPATF-WSLFQMIRNPEAMKAATEEVKRTLENAGQKVSLEGNP 315
Query: 348 RIVEESDIPSLPYMQAVVKEILRLHPTGPLVVRESSEDCTI----ADYRIPAKTRLFVNL 403
+ ++++ LP + +++KE LRL + L +R + ED T+ Y I + +
Sbjct: 316 ICLSQAELNDLPVLDSIIKESLRL-SSASLNIRTAKEDFTLHLEDGSYNIRKDDIIALYP 374
Query: 404 WSLGRDPNHWENPLEFR 420
+ DP + +PL F+
Sbjct: 375 QLMHLDPEIYPDPLTFK 391
>pdb|3LD6|A Chain A, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(C Complex With Ketoconazole
pdb|3LD6|B Chain B, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(C Complex With Ketoconazole
pdb|3JUS|A Chain A, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(Cyp51) In Complex With Econazole
pdb|3JUS|B Chain B, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(Cyp51) In Complex With Econazole
pdb|3JUV|A Chain A, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(C
Length = 461
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 59/136 (43%), Gaps = 15/136 (11%)
Query: 295 LTRENIKAFVMNIFGAGTDTSSITVEWGLAELINKPEVMEKARQEIDSVVGKSRIVEESD 354
LT + + ++ + AG TSS T W L + +K E +V G+ +
Sbjct: 248 LTDDEVAGMLIGLLLAGQHTSSTTSAWMGFFLARDKTLQKKCYLEQKTVCGE-------N 300
Query: 355 IPSLPYMQA--------VVKEILRLHPTGPLVVRESSEDCTIADYRIPAKTRLFVNLWSL 406
+P L Y Q +KE LRL P +++R + T+A Y IP ++ V+
Sbjct: 301 LPPLTYDQLKDLNLLDRCIKETLRLRPPIMIMMRMARTPQTVAGYTIPPGHQVCVSPTVN 360
Query: 407 GRDPNHWENPLEFRPE 422
R + W L+F P+
Sbjct: 361 QRLKDSWVERLDFNPD 376
>pdb|1IZO|A Chain A, Cytochrome P450 Bs Beta Complexed With Fatty Acid
pdb|1IZO|B Chain B, Cytochrome P450 Bs Beta Complexed With Fatty Acid
pdb|1IZO|C Chain C, Cytochrome P450 Bs Beta Complexed With Fatty Acid
pdb|2ZQX|A Chain A, Cytochrome P450bsbeta Cocrystallized With Heptanoic Acid
pdb|2ZQX|B Chain B, Cytochrome P450bsbeta Cocrystallized With Heptanoic Acid
pdb|2ZQX|C Chain C, Cytochrome P450bsbeta Cocrystallized With Heptanoic Acid
pdb|2ZQJ|A Chain A, Substrate-Free Form Of Cytochrome P450bsbeta
pdb|2ZQJ|B Chain B, Substrate-Free Form Of Cytochrome P450bsbeta
pdb|2ZQJ|C Chain C, Substrate-Free Form Of Cytochrome P450bsbeta
Length = 417
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 31/61 (50%)
Query: 362 QAVVKEILRLHPTGPLVVRESSEDCTIADYRIPAKTRLFVNLWSLGRDPNHWENPLEFRP 421
+ V+E+ R +P GP + +D + T + ++L+ DP W++P EFRP
Sbjct: 277 EMFVQEVRRYYPFGPFLGALVKKDFVWNNCEFKKGTSVLLDLYGTNHDPRLWDHPDEFRP 336
Query: 422 E 422
E
Sbjct: 337 E 337
>pdb|3K1O|A Chain A, Crystal Structure Of Sterol 14-alpha Demethylase (cyp51)
From Trypanosoma Cruzi In Complex With A Potential
Antichagasic Drug, Posaconazole
pdb|3KSW|A Chain A, Crystal Structure Of Sterol 14alpha-demethylase (cyp51)
From Trypanosoma Cruzi In Complex With An Inhibitor Vnf
((4-(4-
Chlorophenyl)-n-[2-(1h-imidazol-1-yl)-1-
phenylethyl]benzamide)
Length = 458
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/131 (20%), Positives = 60/131 (45%), Gaps = 4/131 (3%)
Query: 294 RLTRENIKAFVMNIFGAGTDTSSITVEWGLAELIN--KPEVMEKARQEIDSVVGKSRIVE 351
R++ + ++ AG TS+IT W + L++ + ++K +EID +++
Sbjct: 246 RMSLHEVCGMIVAAMFAGQHTSTITTSWSMLHLMHPKNKKWLDKLHKEIDEF--PAQLNY 303
Query: 352 ESDIPSLPYMQAVVKEILRLHPTGPLVVRESSEDCTIADYRIPAKTRLFVNLWSLGRDPN 411
++ + +P+ + V+E +R P +V+R + + Y +P + + D
Sbjct: 304 DNVMDEMPFAERCVRESIRRDPPLLMVMRMVKAEVKVGSYVVPKGDIIACSPLLSHHDEE 363
Query: 412 HWENPLEFRPE 422
+ NP + PE
Sbjct: 364 AFPNPRLWDPE 374
>pdb|3KHM|A Chain A, Crystal Structure Of Sterol 14alpha-Demethylase (Cyp51)
From Trypanosoma Cruzi In Complex With Inhibitor
Fluconazole
Length = 464
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/131 (20%), Positives = 60/131 (45%), Gaps = 4/131 (3%)
Query: 294 RLTRENIKAFVMNIFGAGTDTSSITVEWGLAELIN--KPEVMEKARQEIDSVVGKSRIVE 351
R++ + ++ AG TS+IT W + L++ + ++K +EID +++
Sbjct: 252 RMSLHEVCGMIVAAMFAGQHTSTITTSWSMLHLMHPKNKKWLDKLHKEIDEF--PAQLNY 309
Query: 352 ESDIPSLPYMQAVVKEILRLHPTGPLVVRESSEDCTIADYRIPAKTRLFVNLWSLGRDPN 411
++ + +P+ + V+E +R P +V+R + + Y +P + + D
Sbjct: 310 DNVMDEMPFAERCVRESIRRDPPLLMVMRMVKAEVKVGSYVVPKGDIIACSPLLSHHDEE 369
Query: 412 HWENPLEFRPE 422
+ NP + PE
Sbjct: 370 AFPNPRLWDPE 380
>pdb|2WUZ|A Chain A, X-Ray Structure Of Cyp51 From Trypanosoma Cruzi In Complex
With Fluconazole In Alternative Conformation
pdb|2WUZ|B Chain B, X-Ray Structure Of Cyp51 From Trypanosoma Cruzi In Complex
With Fluconazole In Alternative Conformation
pdb|2WX2|A Chain A, X-Ray Structure Of Cyp51 From The Human Pathogen
Trypanosoma Cruzi In Complex With Fluconazole
pdb|2WX2|B Chain B, X-Ray Structure Of Cyp51 From The Human Pathogen
Trypanosoma Cruzi In Complex With Fluconazole
Length = 473
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/131 (20%), Positives = 60/131 (45%), Gaps = 4/131 (3%)
Query: 294 RLTRENIKAFVMNIFGAGTDTSSITVEWGLAELIN--KPEVMEKARQEIDSVVGKSRIVE 351
R++ + ++ AG TS+IT W + L++ + ++K +EID +++
Sbjct: 261 RMSLHEVCGMIVAAMFAGQHTSTITTSWSMLHLMHPKNKKWLDKLHKEIDEF--PAQLNY 318
Query: 352 ESDIPSLPYMQAVVKEILRLHPTGPLVVRESSEDCTIADYRIPAKTRLFVNLWSLGRDPN 411
++ + +P+ + V+E +R P +V+R + + Y +P + + D
Sbjct: 319 DNVMDEMPFAERCVRESIRRDPPLLMVMRMVKAEVKVGSYVVPKGDIIACSPLLSHHDEE 378
Query: 412 HWENPLEFRPE 422
+ NP + PE
Sbjct: 379 AFPNPRLWDPE 389
>pdb|1GWI|A Chain A, The 1.92 A Structure Of Streptomyces Coelicolor A3(2)
Cyp154c1: A New Monooxygenase That Functionalizes
Macrolide Ring Systems
pdb|1GWI|B Chain B, The 1.92 A Structure Of Streptomyces Coelicolor A3(2)
Cyp154c1: A New Monooxygenase That Functionalizes
Macrolide Ring Systems
Length = 411
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
Query: 362 QAVVKEILRLH-PTGPLVVRESSEDCTIADYRIPAKTRLFVNLWSLGRD 409
AVV+E LR PT +++R ++ED + D IPA L V+ +LGRD
Sbjct: 276 SAVVEETLRFSTPTSHVLIRFAAEDVPVGDRVIPAGDALIVSYGALGRD 324
>pdb|3GW9|A Chain A, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei Bound To An Inhibitor N-(1-(2,4-
Dichlorophenyl)-2-(1h-Imidazol-1-Yl)ethyl)-4-(5-Phenyl-
1,3, 4-Oxaziazol-2-Yl)benzamide
pdb|3GW9|B Chain B, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei Bound To An Inhibitor N-(1-(2,4-
Dichlorophenyl)-2-(1h-Imidazol-1-Yl)ethyl)-4-(5-Phenyl-
1,3, 4-Oxaziazol-2-Yl)benzamide
pdb|3GW9|C Chain C, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei Bound To An Inhibitor N-(1-(2,4-
Dichlorophenyl)-2-(1h-Imidazol-1-Yl)ethyl)-4-(5-Phenyl-
1,3, 4-Oxaziazol-2-Yl)benzamide
pdb|3GW9|D Chain D, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei Bound To An Inhibitor N-(1-(2,4-
Dichlorophenyl)-2-(1h-Imidazol-1-Yl)ethyl)-4-(5-Phenyl-
1,3, 4-Oxaziazol-2-Yl)benzamide
Length = 450
Score = 37.0 bits (84), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 27/115 (23%), Positives = 49/115 (42%), Gaps = 4/115 (3%)
Query: 310 AGTDTSSITVEWGLAELINKPEV--MEKARQEIDSVVGKSRIVEESDIPSLPYMQAVVKE 367
AG TSSIT W + L++ V +E R+EI+ + D +P+ + +E
Sbjct: 264 AGQHTSSITTTWSMLHLMHPANVKHLEALRKEIEEFPAQLNYNNVMD--EMPFAERCARE 321
Query: 368 ILRLHPTGPLVVRESSEDCTIADYRIPAKTRLFVNLWSLGRDPNHWENPLEFRPE 422
+R P +++R+ D + Y +P + + D + P + PE
Sbjct: 322 SIRRDPPLLMLMRKVMADVKVGSYVVPKGDIIACSPLLSHHDEEAFPEPRRWDPE 376
>pdb|3G1Q|A Chain A, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei In Ligand Free State
pdb|3G1Q|B Chain B, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei In Ligand Free State
pdb|3G1Q|C Chain C, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei In Ligand Free State
pdb|3G1Q|D Chain D, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei In Ligand Free State
Length = 450
Score = 37.0 bits (84), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 27/115 (23%), Positives = 49/115 (42%), Gaps = 4/115 (3%)
Query: 310 AGTDTSSITVEWGLAELINKPEV--MEKARQEIDSVVGKSRIVEESDIPSLPYMQAVVKE 367
AG TSSIT W + L++ V +E R+EI+ + D +P+ + +E
Sbjct: 265 AGQHTSSITTTWSMLHLMHPANVKHLEALRKEIEEFPAQLNYNNVMD--EMPFAERCARE 322
Query: 368 ILRLHPTGPLVVRESSEDCTIADYRIPAKTRLFVNLWSLGRDPNHWENPLEFRPE 422
+R P +++R+ D + Y +P + + D + P + PE
Sbjct: 323 SIRRDPPLLMLMRKVMADVKVGSYVVPKGDIIACSPLLSHHDEEAFPEPRRWDPE 377
>pdb|2WV2|A Chain A, X-Ray Structure Of Cyp51 From The Human Pathogen
Trypanosoma Brucei In Complex With Fluconazole
Length = 475
Score = 37.0 bits (84), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 27/115 (23%), Positives = 49/115 (42%), Gaps = 4/115 (3%)
Query: 310 AGTDTSSITVEWGLAELINKPEV--MEKARQEIDSVVGKSRIVEESDIPSLPYMQAVVKE 367
AG TSSIT W + L++ V +E R+EI+ + D +P+ + +E
Sbjct: 277 AGQHTSSITTTWSMLHLMHPANVKHLEALRKEIEEFPAQLNYNNVMD--EMPFAERCARE 334
Query: 368 ILRLHPTGPLVVRESSEDCTIADYRIPAKTRLFVNLWSLGRDPNHWENPLEFRPE 422
+R P +++R+ D + Y +P + + D + P + PE
Sbjct: 335 SIRRDPPLLMLMRKVMADVKVGSYVVPKGDIIACSPLLSHHDEEAFPEPRRWDPE 389
>pdb|3TIK|A Chain A, Sterol 14-Alpha Demethylase (Cyp51) From Trypanosoma
Brucei In Complex With The Tipifarnib Derivative
6-((4-Chlorophenyl)(Methoxy)(1-Methyl-
1h-Imidazol-5-Yl)methyl)-4-(2,
6-Difluorophenyl)-1-Methylquinolin- 2(1h)-One
pdb|3TIK|B Chain B, Sterol 14-Alpha Demethylase (Cyp51) From Trypanosoma
Brucei In Complex With The Tipifarnib Derivative
6-((4-Chlorophenyl)(Methoxy)(1-Methyl-
1h-Imidazol-5-Yl)methyl)-4-(2,
6-Difluorophenyl)-1-Methylquinolin- 2(1h)-One
pdb|3TIK|C Chain C, Sterol 14-Alpha Demethylase (Cyp51) From Trypanosoma
Brucei In Complex With The Tipifarnib Derivative
6-((4-Chlorophenyl)(Methoxy)(1-Methyl-
1h-Imidazol-5-Yl)methyl)-4-(2,
6-Difluorophenyl)-1-Methylquinolin- 2(1h)-One
pdb|3TIK|D Chain D, Sterol 14-Alpha Demethylase (Cyp51) From Trypanosoma
Brucei In Complex With The Tipifarnib Derivative
6-((4-Chlorophenyl)(Methoxy)(1-Methyl-
1h-Imidazol-5-Yl)methyl)-4-(2,
6-Difluorophenyl)-1-Methylquinolin- 2(1h)-One
Length = 454
Score = 37.0 bits (84), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 27/115 (23%), Positives = 49/115 (42%), Gaps = 4/115 (3%)
Query: 310 AGTDTSSITVEWGLAELINKPEV--MEKARQEIDSVVGKSRIVEESDIPSLPYMQAVVKE 367
AG TSSIT W + L++ V +E R+EI+ + D +P+ + +E
Sbjct: 264 AGQHTSSITTTWSMLHLMHPANVKHLEALRKEIEEFPAQLNYNNVMD--EMPFAERCARE 321
Query: 368 ILRLHPTGPLVVRESSEDCTIADYRIPAKTRLFVNLWSLGRDPNHWENPLEFRPE 422
+R P +++R+ D + Y +P + + D + P + PE
Sbjct: 322 SIRRDPPLLMLMRKVMADVKVGSYVVPKGDIIACSPLLSHHDEEAFPEPRRWDPE 376
>pdb|3P99|A Chain A, Sterol 14alpha-Demethylase (Cyp51) From Trypanosoma Brucei
In Complex With
Delta7-14alpha-Methylene-Cyclopropyl-Dihydrolanosterol
pdb|3P99|B Chain B, Sterol 14alpha-Demethylase (Cyp51) From Trypanosoma Brucei
In Complex With
Delta7-14alpha-Methylene-Cyclopropyl-Dihydrolanosterol
pdb|3P99|C Chain C, Sterol 14alpha-Demethylase (Cyp51) From Trypanosoma Brucei
In Complex With
Delta7-14alpha-Methylene-Cyclopropyl-Dihydrolanosterol
pdb|3P99|D Chain D, Sterol 14alpha-Demethylase (Cyp51) From Trypanosoma Brucei
In Complex With
Delta7-14alpha-Methylene-Cyclopropyl-Dihydrolanosterol
Length = 453
Score = 37.0 bits (84), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 27/115 (23%), Positives = 49/115 (42%), Gaps = 4/115 (3%)
Query: 310 AGTDTSSITVEWGLAELINKPEV--MEKARQEIDSVVGKSRIVEESDIPSLPYMQAVVKE 367
AG TSSIT W + L++ V +E R+EI+ + D +P+ + +E
Sbjct: 263 AGQHTSSITTTWSMLHLMHPANVKHLEALRKEIEEFPAQLNYNNVMD--EMPFAERCARE 320
Query: 368 ILRLHPTGPLVVRESSEDCTIADYRIPAKTRLFVNLWSLGRDPNHWENPLEFRPE 422
+R P +++R+ D + Y +P + + D + P + PE
Sbjct: 321 SIRRDPPLLMLMRKVMADVKVGSYVVPKGDIIACSPLLSHHDEEAFPEPRRWDPE 375
>pdb|2X2N|A Chain A, X-Ray Structure Of Cyp51 From Trypanosoma Brucei In
Complex With Posaconazole In Two Different Conformations
pdb|2X2N|B Chain B, X-Ray Structure Of Cyp51 From Trypanosoma Brucei In
Complex With Posaconazole In Two Different Conformations
pdb|2X2N|C Chain C, X-Ray Structure Of Cyp51 From Trypanosoma Brucei In
Complex With Posaconazole In Two Different Conformations
pdb|2X2N|D Chain D, X-Ray Structure Of Cyp51 From Trypanosoma Brucei In
Complex With Posaconazole In Two Different Conformations
Length = 475
Score = 37.0 bits (84), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 27/115 (23%), Positives = 49/115 (42%), Gaps = 4/115 (3%)
Query: 310 AGTDTSSITVEWGLAELINKPEV--MEKARQEIDSVVGKSRIVEESDIPSLPYMQAVVKE 367
AG TSSIT W + L++ V +E R+EI+ + D +P+ + +E
Sbjct: 277 AGQHTSSITTTWSMLHLMHPANVKHLEALRKEIEEFPAQLNYNNVMD--EMPFAERCARE 334
Query: 368 ILRLHPTGPLVVRESSEDCTIADYRIPAKTRLFVNLWSLGRDPNHWENPLEFRPE 422
+R P +++R+ D + Y +P + + D + P + PE
Sbjct: 335 SIRRDPPLLMLMRKVMADVKVGSYVVPKGDIIACSPLLSHHDEEAFPEPRRWDPE 389
>pdb|3ABB|A Chain A, Crystal Structure Of Cyp105d6
Length = 408
Score = 37.0 bits (84), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 29/125 (23%), Positives = 51/125 (40%), Gaps = 18/125 (14%)
Query: 292 EMRLTRENIKAFVMNIFGAGTDTSSITVEWGLAELINKPEVMEKARQEIDSVVGKSRIVE 351
E L + + + + AG +T+ + G LI PE ++ ++ +V G
Sbjct: 225 EGDLDHDEVVMIALVLLVAGHETTVNAIALGALTLIQHPEQIDVLLRDPGAVSG------ 278
Query: 352 ESDIPSLPYMQAVVKEILRLHPTGPLVVRESSEDCTIADYRIPAKTRLFVNLWSLGRDPN 411
VV+E+LR +VR + ED + I A + V++ + RD
Sbjct: 279 ------------VVEELLRFTSVSDHIVRMAKEDIEVGGATIKAGDAVLVSITLMNRDAK 326
Query: 412 HWENP 416
+ENP
Sbjct: 327 AYENP 331
>pdb|3R9C|A Chain A, Crystal Structure Of Mycobacterium Smegmatis Cyp164a2 With
Econazole Bound
pdb|3R9B|A Chain A, Crystal Structure Of Mycobacterium Smegmatis Cyp164a2 In
Ligand Free State
pdb|3R9B|B Chain B, Crystal Structure Of Mycobacterium Smegmatis Cyp164a2 In
Ligand Free State
pdb|3R9B|C Chain C, Crystal Structure Of Mycobacterium Smegmatis Cyp164a2 In
Ligand Free State
Length = 418
Score = 35.8 bits (81), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 30/60 (50%)
Query: 363 AVVKEILRLHPTGPLVVRESSEDCTIADYRIPAKTRLFVNLWSLGRDPNHWENPLEFRPE 422
AV++E +R P LV R + +D TI + +P + + L + RDP P F P+
Sbjct: 291 AVIEETMRYDPPVQLVSRYAGDDLTIGTHTVPKGDTMLLLLAAAHRDPTIVGAPDRFDPD 350
>pdb|2JJN|A Chain A, Structure Of Closed Cytochrome P450 Eryk
pdb|2JJO|A Chain A, Structure Of Cytochrome P450 Eryk In Complex With Its
Natural Substrate Erd
pdb|2JJP|A Chain A, Structure Of Cytochrome P450 Eryk In Complex With
Inhibitor Ketoconazole (Kc)
pdb|2XFH|A Chain A, Structure Of Cytochrome P450 Eryk Cocrystallized With
Inhibitor Clotrimazole
Length = 411
Score = 35.8 bits (81), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 34/63 (53%), Gaps = 4/63 (6%)
Query: 361 MQAVVKEILRLHPTGPLVVRESSEDCTIADYRIPAKTRLFVNLW--SLGRDPNHWENPLE 418
+ A+V+E+LR P P + R +++ +A IPA + VN W S RD + ++P
Sbjct: 274 IPAIVEEVLRYRPPFPQMQRTTTKATEVAGVPIPAD--VMVNTWVLSANRDSDAHDDPDR 331
Query: 419 FRP 421
F P
Sbjct: 332 FDP 334
>pdb|2VRV|A Chain A, Structure Of Histidine Tagged Cytochrome P450 Eryk In
Complex With Inhibitor Clotrimazole (Clt)
pdb|2WIO|A Chain A, Structure Of The Histidine Tagged, Open Cytochrome P450
Eryk From S. Erythraea
Length = 431
Score = 35.4 bits (80), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 34/63 (53%), Gaps = 4/63 (6%)
Query: 361 MQAVVKEILRLHPTGPLVVRESSEDCTIADYRIPAKTRLFVNLW--SLGRDPNHWENPLE 418
+ A+V+E+LR P P + R +++ +A IPA + VN W S RD + ++P
Sbjct: 294 IPAIVEEVLRYRPPFPQMQRTTTKATEVAGVPIPAD--VMVNTWVLSANRDSDAHDDPDR 351
Query: 419 FRP 421
F P
Sbjct: 352 FDP 354
>pdb|3A4Z|A Chain A, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution
pdb|3A4Z|B Chain B, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution
pdb|3A4Z|C Chain C, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution
pdb|3A4Z|D Chain D, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution
pdb|3A4Z|E Chain E, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution
pdb|3A50|A Chain A, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound Vitamin D3
pdb|3A50|B Chain B, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound Vitamin D3
pdb|3A50|C Chain C, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound Vitamin D3
pdb|3A50|D Chain D, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound Vitamin D3
pdb|3A50|E Chain E, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound Vitamin D3
pdb|3A51|A Chain A, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound 25-Hydroxyvitamin D3
pdb|3A51|B Chain B, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound 25-Hydroxyvitamin D3
pdb|3A51|C Chain C, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound 25-Hydroxyvitamin D3
pdb|3A51|D Chain D, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound 25-Hydroxyvitamin D3
pdb|3A51|E Chain E, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound 25-Hydroxyvitamin D3
Length = 411
Score = 34.7 bits (78), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 31/124 (25%), Positives = 56/124 (45%), Gaps = 19/124 (15%)
Query: 294 RLTRENIKAFVMNIFGAGTDTSSITVEWGLAELINKPEVMEKARQEIDSVVGKSRIVEES 353
RL++E + A M + AG +T+ + G+ L+ P+ + +++ E
Sbjct: 220 RLSQEELVAMAMLLLIAGHETTVNLIGNGVLALLTHPD--------------QRKLLAED 265
Query: 354 DIPSLPYMQAVVKEILRL-HPTGPLVVRESSEDCTIADYRIPAKTRLFVNLWSLGRDPNH 412
PSL + + V+E LR P +R ++ED T + IPA + + L + RD +
Sbjct: 266 --PSL--ISSAVEEFLRFDSPVSQAPIRFTAEDVTYSGVTIPAGEMVMLGLAAANRDADW 321
Query: 413 WENP 416
P
Sbjct: 322 MPEP 325
>pdb|3A4G|A Chain A, Structure Of Cytochrome P450 Vdh From Pseudonocardia
Autotrophica (Trigonal Crystal Form)
pdb|3A4H|A Chain A, Structure Of Cytochrome P450 Vdh From Pseudonocardia
Autotrophica (Orthorhombic Crystal Form)
Length = 411
Score = 34.7 bits (78), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 31/124 (25%), Positives = 56/124 (45%), Gaps = 19/124 (15%)
Query: 294 RLTRENIKAFVMNIFGAGTDTSSITVEWGLAELINKPEVMEKARQEIDSVVGKSRIVEES 353
RL++E + A M + AG +T+ + G+ L+ P+ + +++ E
Sbjct: 220 RLSQEELVAMAMLLLIAGHETTVNLIGNGVLALLTHPD--------------QRKLLAED 265
Query: 354 DIPSLPYMQAVVKEILRL-HPTGPLVVRESSEDCTIADYRIPAKTRLFVNLWSLGRDPNH 412
PSL + + V+E LR P +R ++ED T + IPA + + L + RD +
Sbjct: 266 --PSL--ISSAVEEFLRFDSPVSQAPIRFTAEDVTYSGVTIPAGEMVMLGLAAANRDADW 321
Query: 413 WENP 416
P
Sbjct: 322 MPEP 325
>pdb|3MGX|A Chain A, Crystal Structure Of P450 Oxyd That Is Involved In The
Biosynthesis Of Vancomycin-Type Antibiotics
pdb|3MGX|B Chain B, Crystal Structure Of P450 Oxyd That Is Involved In The
Biosynthesis Of Vancomycin-Type Antibiotics
Length = 415
Score = 33.9 bits (76), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 32/61 (52%)
Query: 361 MQAVVKEILRLHPTGPLVVRESSEDCTIADYRIPAKTRLFVNLWSLGRDPNHWENPLEFR 420
+ VV+E+LR V+R ++ D TI +P+ T + L + RDP +++P F
Sbjct: 287 VDTVVEEVLRWTSPAMHVLRVTTADVTINGRDLPSGTPVVAWLPAANRDPAEFDDPDTFL 346
Query: 421 P 421
P
Sbjct: 347 P 347
>pdb|3EJB|B Chain B, Crystal Structure Of P450bioi In Complex With
Tetradecanoic Acid Ligated Acyl Carrier Protein
pdb|3EJB|D Chain D, Crystal Structure Of P450bioi In Complex With
Tetradecanoic Acid Ligated Acyl Carrier Protein
pdb|3EJB|F Chain F, Crystal Structure Of P450bioi In Complex With
Tetradecanoic Acid Ligated Acyl Carrier Protein
pdb|3EJB|H Chain H, Crystal Structure Of P450bioi In Complex With
Tetradecanoic Acid Ligated Acyl Carrier Protein
pdb|3EJD|B Chain B, Crystal Structure Of P450bioi In Complex With Hexadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJD|D Chain D, Crystal Structure Of P450bioi In Complex With Hexadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJD|F Chain F, Crystal Structure Of P450bioi In Complex With Hexadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJD|H Chain H, Crystal Structure Of P450bioi In Complex With Hexadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJE|B Chain B, Crystal Structure Of P450bioi In Complex With Octadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJE|D Chain D, Crystal Structure Of P450bioi In Complex With Octadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJE|F Chain F, Crystal Structure Of P450bioi In Complex With Octadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJE|H Chain H, Crystal Structure Of P450bioi In Complex With Octadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
Length = 404
Score = 32.3 bits (72), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 29/123 (23%), Positives = 53/123 (43%), Gaps = 18/123 (14%)
Query: 294 RLTRENIKAFVMNIFGAGTDTSSITVEWGLAELINKPEVMEKARQEIDSVVGKSRIVEES 353
+LT E + + + AG +T+ + + L+ PE + K R+ D ++G +
Sbjct: 218 KLTEEEAASTCILLAIAGHETTVNLISNSVLCLLQHPEQLLKLRENPD-LIGTA------ 270
Query: 354 DIPSLPYMQAVVKEILRLHPTGPLVVRESSEDCTIADYRIPAKTRLFVNLWSLGRDPNHW 413
V+E LR + R +SED I I ++++ L + RDP+ +
Sbjct: 271 -----------VEECLRYESPTQMTARVASEDIDICGVTIRQGEQVYLLLGAANRDPSIF 319
Query: 414 ENP 416
NP
Sbjct: 320 TNP 322
>pdb|1PKF|A Chain A, Crystal Structure Of Epothilone D-Bound Cytochrome
P450epok
Length = 419
Score = 32.3 bits (72), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 25/46 (54%)
Query: 294 RLTRENIKAFVMNIFGAGTDTSSITVEWGLAELINKPEVMEKARQE 339
RL+ + + A V I AGTDT+ + + + L+ PE +E + E
Sbjct: 238 RLSTKELVALVGAIIAAGTDTTIYLIAFAVLNLLRSPEALELVKAE 283
>pdb|1Q5D|A Chain A, Epothilone B-Bound Cytochrome P450epok
pdb|1Q5E|A Chain A, Substrate-Free Cytochrome P450epok
Length = 419
Score = 32.3 bits (72), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 25/46 (54%)
Query: 294 RLTRENIKAFVMNIFGAGTDTSSITVEWGLAELINKPEVMEKARQE 339
RL+ + + A V I AGTDT+ + + + L+ PE +E + E
Sbjct: 238 RLSTKELVALVGAIIAAGTDTTIYLIAFAVLNLLRSPEALELVKAE 283
>pdb|3TYW|A Chain A, Crystal Structure Of Cyp105n1 From Streptomyces Coelicolor
A3(2)
pdb|3TYW|B Chain B, Crystal Structure Of Cyp105n1 From Streptomyces Coelicolor
A3(2)
pdb|3TYW|C Chain C, Crystal Structure Of Cyp105n1 From Streptomyces Coelicolor
A3(2)
pdb|3TYW|D Chain D, Crystal Structure Of Cyp105n1 From Streptomyces Coelicolor
A3(2)
pdb|4FXB|A Chain A, Crystal Structure Of Cyp105n1 From Streptomyces
Coelicolor: A Cytochrome P450 Oxidase In The Coelibactin
Siderophore Biosynthetic Pathway
pdb|4FXB|B Chain B, Crystal Structure Of Cyp105n1 From Streptomyces
Coelicolor: A Cytochrome P450 Oxidase In The Coelibactin
Siderophore Biosynthetic Pathway
Length = 417
Score = 31.6 bits (70), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 26/123 (21%), Positives = 53/123 (43%), Gaps = 19/123 (15%)
Query: 295 LTRENIKAFVMNIFGAGTDTSSITVEWGLAELINKPEVMEKARQEIDSVVGKSRIVEESD 354
+T E + + + AG +T++ + L+++PE+ + R++ D
Sbjct: 234 VTTEQLLSTLGITINAGRETTTSMIALSTLLLLDRPELPAELRKDPD------------- 280
Query: 355 IPSLPYMQAVVKEILR-LHPTGPLVVRESSEDCTIADYRIPAKTRLFVNLWSLGRDPNHW 413
M A V E+LR L + +R ++ED ++ +PA + L DP +
Sbjct: 281 -----LMPAAVDELLRVLSVADSIPLRVAAEDIELSGRTVPADDGVIALLAGANHDPEQF 335
Query: 414 ENP 416
++P
Sbjct: 336 DDP 338
>pdb|1EHE|A Chain A, Crystal Structures Of Cytochrome P450nor And Its Mutants
(Ser286 Val, Thr) In The Ferric Resting State At
Cryogenic Temperature: A Comparative Analysis With
Monooxygenase Cytochrome P450s
pdb|1GEI|A Chain A, Structural Characterization Of N-Butyl-Isocyanide
Complexes Of Cytochromes P450nor And P450cam
pdb|1GED|A Chain A, A Positive Charge Route For The Access Of Nadh To Heme
Formed In The Distal Heme Pocket Of Cytochrome P450nor
pdb|1GEJ|A Chain A, Structural Characterization Of N-Butyl-Isocyanide
Complexes Of Cytochromes P450nor And P450cam
pdb|1ROM|A Chain A, Crystal Structure Of Nitric Reductase From Denitrifying
Fungus Fusarium Oxysporum
pdb|2ROM|A Chain A, Crystal Structure Of Nitric Reductase From Denitrifying
Fungus Fusarium Oxysporum Complex With Carbon Monoxide
Length = 403
Score = 31.6 bits (70), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 49/119 (41%), Gaps = 21/119 (17%)
Query: 302 AFVMNIFGAGTDTSSITVEWGLAELINKPEVMEKARQEIDSVVGKSRIVEESDIPSLPYM 361
AF++ + G T + I + G+A L P+ + + + PSL
Sbjct: 233 AFLLLVAGNATMVNMIAL--GVATLAQHPDQLAQLKAN----------------PSL--A 272
Query: 362 QAVVKEILRLHPTGPLVV-RESSEDCTIADYRIPAKTRLFVNLWSLGRDPNHWENPLEF 419
V+E+ R H L + R + ED I D + A + + S RD +ENP EF
Sbjct: 273 PQFVEELCRYHTASALAIKRTAKEDVMIGDKLVRANEGIIASNQSANRDEEVFENPDEF 331
>pdb|1ULW|A Chain A, Crystal Structure Of P450nor Ser73gly/ser75gly Mutant
Length = 402
Score = 31.6 bits (70), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 49/119 (41%), Gaps = 21/119 (17%)
Query: 302 AFVMNIFGAGTDTSSITVEWGLAELINKPEVMEKARQEIDSVVGKSRIVEESDIPSLPYM 361
AF++ + G T + I + G+A L P+ + + + PSL
Sbjct: 232 AFLLLVAGNATMVNMIAL--GVATLAQHPDQLAQLKAN----------------PSL--A 271
Query: 362 QAVVKEILRLHPTGPLVV-RESSEDCTIADYRIPAKTRLFVNLWSLGRDPNHWENPLEF 419
V+E+ R H L + R + ED I D + A + + S RD +ENP EF
Sbjct: 272 PQFVEELCRYHTASALAIKRTAKEDVMIGDKLVRANEGIIASNQSANRDEEVFENPDEF 330
>pdb|1XQD|A Chain A, Crystal Structure Of P450nor Complexed With 3-
Pyridinealdehyde Adenine Dinucleotide
Length = 403
Score = 31.6 bits (70), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 49/119 (41%), Gaps = 21/119 (17%)
Query: 302 AFVMNIFGAGTDTSSITVEWGLAELINKPEVMEKARQEIDSVVGKSRIVEESDIPSLPYM 361
AF++ + G T + I + G+A L P+ + + + PSL
Sbjct: 233 AFLLLVAGNATMVNMIAL--GVATLAQHPDQLAQLKAN----------------PSL--A 272
Query: 362 QAVVKEILRLHPTGPLVV-RESSEDCTIADYRIPAKTRLFVNLWSLGRDPNHWENPLEF 419
V+E+ R H L + R + ED I D + A + + S RD +ENP EF
Sbjct: 273 PQFVEELCRYHTASALAIKRTAKEDVMIGDKLVRANEGIIASNQSANRDEEVFENPDEF 331
>pdb|1JFB|A Chain A, X-Ray Structure Of Nitric Oxide Reductase (Cytochrome
P450nor) In The Ferric Resting State At Atomic
Resolution
pdb|1JFC|A Chain A, X-ray Structure Of Nitric Oxide Reductase (cytochrome
P450nor) In The Ferrous Co State At Atomic Resolution
Length = 404
Score = 31.6 bits (70), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 49/119 (41%), Gaps = 21/119 (17%)
Query: 302 AFVMNIFGAGTDTSSITVEWGLAELINKPEVMEKARQEIDSVVGKSRIVEESDIPSLPYM 361
AF++ + G T + I + G+A L P+ + + + PSL
Sbjct: 234 AFLLLVAGNATMVNMIAL--GVATLAQHPDQLAQLKAN----------------PSL--A 273
Query: 362 QAVVKEILRLHPTGPLVV-RESSEDCTIADYRIPAKTRLFVNLWSLGRDPNHWENPLEF 419
V+E+ R H L + R + ED I D + A + + S RD +ENP EF
Sbjct: 274 PQFVEELCRYHTASALAIKRTAKEDVMIGDKLVRANEGIIASNQSANRDEEVFENPDEF 332
>pdb|1CL6|A Chain A, Crystal Structures Of Ferric-No Complexes Of Fungal Nitric
Oxide Reductase And Its Ser286 Mutants At Cryogenic
Temperature
Length = 402
Score = 31.6 bits (70), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 49/119 (41%), Gaps = 21/119 (17%)
Query: 302 AFVMNIFGAGTDTSSITVEWGLAELINKPEVMEKARQEIDSVVGKSRIVEESDIPSLPYM 361
AF++ + G T + I + G+A L P+ + + + PSL
Sbjct: 232 AFLLLVAGNATMVNMIAL--GVATLAQHPDQLAQLKAN----------------PSL--A 271
Query: 362 QAVVKEILRLHPTGPLVV-RESSEDCTIADYRIPAKTRLFVNLWSLGRDPNHWENPLEF 419
V+E+ R H L + R + ED I D + A + + S RD +ENP EF
Sbjct: 272 PQFVEELCRYHTASALAIKRTAKEDVMIGDKLVRANEGIIASNQSANRDEEVFENPDEF 330
>pdb|3P3O|A Chain A, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Ntermii) From Streptomyces Thioluteus
pdb|3P3X|A Chain A, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Nterm- Aurh-I) From Streptomyces Thioluteus
pdb|3P3X|B Chain B, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Nterm- Aurh-I) From Streptomyces Thioluteus
pdb|3P3Z|A Chain A, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh From Streptomyces Thioluteus In Complex With
Ancymidol
Length = 416
Score = 31.6 bits (70), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Query: 364 VVKEILRLHPTGPLVV-RESSEDCTIADYRIPAKTRLFVNLWSLGRDP 410
V+E+LR PT P+ R ++ED + RIP T +F+ RDP
Sbjct: 289 AVEEVLRWSPTLPVTATRVAAEDFEVNGVRIPTGTPVFMCAHVAHRDP 336
>pdb|3P3L|A Chain A, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Wildtype) From Streptomyces Thioluteus
pdb|3P3L|B Chain B, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Wildtype) From Streptomyces Thioluteus
Length = 406
Score = 31.6 bits (70), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Query: 364 VVKEILRLHPTGPLVV-RESSEDCTIADYRIPAKTRLFVNLWSLGRDP 410
V+E+LR PT P+ R ++ED + RIP T +F+ RDP
Sbjct: 279 AVEEVLRWSPTLPVTATRVAAEDFEVNGVRIPTGTPVFMCAHVAHRDP 326
>pdb|2WGY|A Chain A, Crystal Structure Of The G243a Mutant Of Cyp130 From M.
Tuberculosis
Length = 413
Score = 31.6 bits (70), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 50/113 (44%), Gaps = 22/113 (19%)
Query: 299 NIKAFVMNIFGAGTDTSSITVEWGLAELINKPEVMEKARQEIDSVVGKSRIVEESDIPSL 358
+I AF + AG DT + + + L +P+ + R +D G IP
Sbjct: 238 SILAFTFTMVTAGNDTVTGMLGGSMPLLHRRPD---QRRLLLDDPEG---------IPD- 284
Query: 359 PYMQAVVKEILRLHPTGPL--VVRESSEDCTIADYRIPAKTRLFVNLWSLGRD 409
V+E+LRL T P+ + R ++ D TI D IPA R+ + S RD
Sbjct: 285 -----AVEELLRL--TSPVQGLARTTTRDVTIGDTTIPAGRRVLLLYGSANRD 330
>pdb|1F24|A Chain A, Crystal Structure Of No Complex Of Thr243ala Mutants Of
Cytochrome P450nor
Length = 402
Score = 31.6 bits (70), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Query: 365 VKEILRLHPTGPLVV-RESSEDCTIADYRIPAKTRLFVNLWSLGRDPNHWENPLEF 419
V+E+ R H L + R + ED I D + A + + S RD +ENP EF
Sbjct: 275 VEELCRYHTASALAIKRTAKEDVMIGDKLVRANEGIIASNQSANRDEEVFENPDEF 330
>pdb|1F25|A Chain A, Crystal Structure Of No Complex Of Thr243asn Mutants Of
Cytochrome P450nor
Length = 402
Score = 31.2 bits (69), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Query: 365 VKEILRLHPTGPLVV-RESSEDCTIADYRIPAKTRLFVNLWSLGRDPNHWENPLEF 419
V+E+ R H L + R + ED I D + A + + S RD +ENP EF
Sbjct: 275 VEELCRYHTASALAIKRTAKEDVMIGDKLVRANEGIIASNQSANRDEEVFENPDEF 330
>pdb|1F26|A Chain A, Crystal Structure Of No Complex Of Thr243val Mutants Of
Cytochrome P450nor
Length = 402
Score = 31.2 bits (69), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Query: 365 VKEILRLHPTGPLVV-RESSEDCTIADYRIPAKTRLFVNLWSLGRDPNHWENPLEF 419
V+E+ R H L + R + ED I D + A + + S RD +ENP EF
Sbjct: 275 VEELCRYHTASALAIKRTAKEDVMIGDKLVRANEGIIASNQSANRDEEVFENPDEF 330
>pdb|1EHF|A Chain A, Crystal Structures Of Cytochrome P450nor And Its Mutants
(Ser286 Val, Thr) In The Ferric Resting State At
Cryogenic Temperature: A Comparative Analysis With
Monooxygenase Cytochrome P450s
Length = 403
Score = 31.2 bits (69), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 49/119 (41%), Gaps = 21/119 (17%)
Query: 302 AFVMNIFGAGTDTSSITVEWGLAELINKPEVMEKARQEIDSVVGKSRIVEESDIPSLPYM 361
AF++ + G T + I + G+A L P+ + + + PSL
Sbjct: 233 AFLLLVAGNATMVNMIAL--GVATLAQHPDQLAQLKAN----------------PSL--A 272
Query: 362 QAVVKEILRLHPTGPLVV-RESSEDCTIADYRIPAKTRLFVNLWSLGRDPNHWENPLEF 419
V+E+ R H L + R + ED I D + A + + S RD +ENP EF
Sbjct: 273 PQFVEELCRYHTATALAIKRTAKEDVMIGDKLVRANEGIIASNQSANRDEEVFENPDEF 331
>pdb|1CMJ|A Chain A, Crystal Structures Of Ferric-No Complexes Of Fungal Nitric
Oxide Reductase And Their Ser286 Mutants At Cryogenic
Temperature
Length = 402
Score = 31.2 bits (69), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 49/119 (41%), Gaps = 21/119 (17%)
Query: 302 AFVMNIFGAGTDTSSITVEWGLAELINKPEVMEKARQEIDSVVGKSRIVEESDIPSLPYM 361
AF++ + G T + I + G+A L P+ + + + PSL
Sbjct: 232 AFLLLVAGNATMVNMIAL--GVATLAQHPDQLAQLKAN----------------PSL--A 271
Query: 362 QAVVKEILRLHPTGPLVV-RESSEDCTIADYRIPAKTRLFVNLWSLGRDPNHWENPLEF 419
V+E+ R H L + R + ED I D + A + + S RD +ENP EF
Sbjct: 272 PQFVEELCRYHTATALAIKRTAKEDVMIGDKLVRANEGIIASNQSANRDEEVFENPDEF 330
>pdb|3B6H|A Chain A, Crystal Structure Of Human Prostacyclin Synthase In
Complex With Inhibitor Minoxidil
pdb|3B6H|B Chain B, Crystal Structure Of Human Prostacyclin Synthase In
Complex With Inhibitor Minoxidil
Length = 498
Score = 30.8 bits (68), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 61/143 (42%), Gaps = 16/143 (11%)
Query: 292 EMRLTRE-NIKAFVMNIFGAGTDTSSITVEWGLAELINKPEVMEKARQEIDSV------- 343
EM ++ E +A V+ ++ + W L L+ PE + R E++S+
Sbjct: 255 EMGVSEEMQARALVLQLWATQGNMGPAAF-WLLLFLLKNPEALAAVRGELESILWQAEQP 313
Query: 344 VGKSRIVEESDIPSLPYMQAVVKEILRLHPTGPLVVRESSEDCT--IADYRIPAKTR--- 398
V ++ + + + S P + +V+ E LRL P + RE D +AD R R
Sbjct: 314 VSQTTTLPQKVLDSTPVLDSVLSESLRL-TAAPFITREVVVDLAMPMADGREFNLRRGDR 372
Query: 399 -LFVNLWSLGRDPNHWENPLEFR 420
L S RDP + +P F+
Sbjct: 373 LLLFPFLSPQRDPEIYTDPEVFK 395
>pdb|1LFK|A Chain A, Crystal Structure Of Oxyb, A Cytochrome P450 Implicated In
An Oxidative Phenol Coupling Reaction During Vancomycin
Biosynthesis
pdb|1LG9|A Chain A, Crystal Structure Of Oxyb, A Cytochrome P450 Implicated In
An Oxidative Phenol Coupling Reaction During Vancomycin
Biosynthesis
pdb|1LGF|A Chain A, Crystal Structure Of Oxyb, A Cytochrome P450 Implicated In
An Oxidative Phenol Coupling Reaction During Vancomycin
Biosynthesis
Length = 398
Score = 30.8 bits (68), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 49/117 (41%), Gaps = 21/117 (17%)
Query: 296 TRENIKAFVMNIFGAGTDTSSITVEWGLAELINKPEVMEKARQEIDSVVGKSRIVEESDI 355
T E ++ F + + AG D S + G+ ++ PE +ID+ G E+S
Sbjct: 222 TDEELRGFCVQVMLAGDDNISGMIGLGVLAMLRHPE-------QIDAFRGD----EQS-- 268
Query: 356 PSLPYMQAVVKEILRLH--PTGPLVVRESSEDCTIADYRIPAKTRLFVNLWSLGRDP 410
Q V E++R P P R + ED T+A I + +L + RDP
Sbjct: 269 -----AQRAVDELIRYLTVPYSP-TPRIAREDLTLAGQEIKKGDSVICSLPAANRDP 319
>pdb|2IAG|A Chain A, Crystal Structure Of Human Prostacyclin Synthase
pdb|2IAG|B Chain B, Crystal Structure Of Human Prostacyclin Synthase
Length = 482
Score = 30.8 bits (68), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 61/143 (42%), Gaps = 16/143 (11%)
Query: 292 EMRLTRE-NIKAFVMNIFGAGTDTSSITVEWGLAELINKPEVMEKARQEIDSV------- 343
EM ++ E +A V+ ++ + W L L+ PE + R E++S+
Sbjct: 243 EMGVSEEMQARALVLQLWATQGNMGPAAF-WLLLFLLKNPEALAAVRGELESILWQAEQP 301
Query: 344 VGKSRIVEESDIPSLPYMQAVVKEILRLHPTGPLVVRESSEDCT--IADYRIPAKTR--- 398
V ++ + + + S P + +V+ E LRL P + RE D +AD R R
Sbjct: 302 VSQTTTLPQKVLDSTPVLDSVLSESLRL-TAAPFITREVVVDLAMPMADGREFNLRRGDR 360
Query: 399 -LFVNLWSLGRDPNHWENPLEFR 420
L S RDP + +P F+
Sbjct: 361 LLLFPFLSPQRDPEIYTDPEVFK 383
>pdb|1EHG|A Chain A, Crystal Structures Of Cytochrome P450nor And Its Mutants
(Ser286 Val, Thr) In The Ferric Resting State At
Cryogenic Temperature: A Comparative Analysis With
Monooxygenase Cytochrome P450s
Length = 403
Score = 30.4 bits (67), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 49/119 (41%), Gaps = 21/119 (17%)
Query: 302 AFVMNIFGAGTDTSSITVEWGLAELINKPEVMEKARQEIDSVVGKSRIVEESDIPSLPYM 361
AF++ + G T + I + G+A L P+ + + + PSL
Sbjct: 233 AFLLLVAGNATMVNMIAL--GVATLAQHPDQLAQLKAN----------------PSL--A 272
Query: 362 QAVVKEILRLHPTGPLVV-RESSEDCTIADYRIPAKTRLFVNLWSLGRDPNHWENPLEF 419
V+E+ R H L + R + ED I D + A + + S RD +ENP EF
Sbjct: 273 PQFVEELCRYHTAVALAIKRTAKEDVMIGDKLVRANEGIIASNQSANRDEEVFENPDEF 331
>pdb|3B98|A Chain A, Crystal Structure Of Zebrafish Prostacyclin Synthase
(Cytochrome P450 8a1)
pdb|3B98|B Chain B, Crystal Structure Of Zebrafish Prostacyclin Synthase
(Cytochrome P450 8a1)
pdb|3B99|A Chain A, Crystal Structure Of Zebrafish Prostacyclin Synthase
(Cytochrome P450 8a1) In Complex With Substrate Analog
U51605
pdb|3B99|B Chain B, Crystal Structure Of Zebrafish Prostacyclin Synthase
(Cytochrome P450 8a1) In Complex With Substrate Analog
U51605
Length = 475
Score = 30.4 bits (67), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 33/69 (47%), Gaps = 4/69 (5%)
Query: 321 WGLAELINKPEVMEKARQEIDSVVGKSRIVEESDIPSLPYMQAVVKEILRLHPTGPLVVR 380
W + L+ PE + R+EI GK +EE + P +V+ E LRL L+ R
Sbjct: 275 WVMGYLLTHPEALRAVREEIQG--GKHLRLEERQ-KNTPVFDSVLWETLRL-TAAALITR 330
Query: 381 ESSEDCTIA 389
+ ++D I
Sbjct: 331 DVTQDKKIC 339
>pdb|1CMN|A Chain A, Crystal Structures Of Ferric-No Complexes Of Fungal Nitric
Oxide Reductase And Their Ser286 Mutants At Cryogenic
Temperature
Length = 402
Score = 30.4 bits (67), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 49/119 (41%), Gaps = 21/119 (17%)
Query: 302 AFVMNIFGAGTDTSSITVEWGLAELINKPEVMEKARQEIDSVVGKSRIVEESDIPSLPYM 361
AF++ + G T + I + G+A L P+ + + + PSL
Sbjct: 232 AFLLLVAGNATMVNMIAL--GVATLAQHPDQLAQLKAN----------------PSL--A 271
Query: 362 QAVVKEILRLHPTGPLVV-RESSEDCTIADYRIPAKTRLFVNLWSLGRDPNHWENPLEF 419
V+E+ R H L + R + ED I D + A + + S RD +ENP EF
Sbjct: 272 PQFVEELCRYHTAVALAIKRTAKEDVMIGDKLVRANEGIIASNQSANRDEEVFENPDEF 330
>pdb|2UUQ|A Chain A, Crystal Structure Of Cyp130 From Mycobacterium
Tuberculosis In The Ligand-Free Form
pdb|2UVN|A Chain A, Crystal Structure Of Econazole-Bound Cyp130 From
Mycobacterium Tuberculosis
pdb|2UVN|B Chain B, Crystal Structure Of Econazole-Bound Cyp130 From
Mycobacterium Tuberculosis
Length = 414
Score = 30.0 bits (66), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 49/113 (43%), Gaps = 22/113 (19%)
Query: 299 NIKAFVMNIFGAGTDTSSITVEWGLAELINKPEVMEKARQEIDSVVGKSRIVEESDIPSL 358
+I AF + G DT + + + L +P+ + R +D G IP
Sbjct: 239 SILAFTFTMVTGGNDTVTGMLGGSMPLLHRRPD---QRRLLLDDPEG---------IPD- 285
Query: 359 PYMQAVVKEILRLHPTGPL--VVRESSEDCTIADYRIPAKTRLFVNLWSLGRD 409
V+E+LRL T P+ + R ++ D TI D IPA R+ + S RD
Sbjct: 286 -----AVEELLRL--TSPVQGLARTTTRDVTIGDTTIPAGRRVLLLYGSANRD 331
>pdb|2WH8|A Chain A, Interaction Of Mycobacterium Tuberculosis Cyp130 With
Heterocyclic Arylamines
pdb|2WH8|B Chain B, Interaction Of Mycobacterium Tuberculosis Cyp130 With
Heterocyclic Arylamines
pdb|2WH8|C Chain C, Interaction Of Mycobacterium Tuberculosis Cyp130 With
Heterocyclic Arylamines
pdb|2WH8|D Chain D, Interaction Of Mycobacterium Tuberculosis Cyp130 With
Heterocyclic Arylamines
pdb|2WHF|A Chain A, Interaction Of Mycobacterium Tuberculosis Cyp130 With
Heterocyclic Arylamines
Length = 413
Score = 30.0 bits (66), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 49/113 (43%), Gaps = 22/113 (19%)
Query: 299 NIKAFVMNIFGAGTDTSSITVEWGLAELINKPEVMEKARQEIDSVVGKSRIVEESDIPSL 358
+I AF + G DT + + + L +P+ + R +D G IP
Sbjct: 238 SILAFTFTMVTGGNDTVTGMLGGSMPLLHRRPD---QRRLLLDDPEG---------IPD- 284
Query: 359 PYMQAVVKEILRLHPTGPL--VVRESSEDCTIADYRIPAKTRLFVNLWSLGRD 409
V+E+LRL T P+ + R ++ D TI D IPA R+ + S RD
Sbjct: 285 -----AVEELLRL--TSPVQGLARTTTRDVTIGDTTIPAGRRVLLLYGSANRD 330
>pdb|2FR7|A Chain A, Crystal Structure Of Cytochrome P450 Cyp199a2
pdb|4DNJ|A Chain A, The Crystal Structures Of 4-Methoxybenzoate Bound Cyp199a2
Length = 412
Score = 28.5 bits (62), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 26/122 (21%), Positives = 46/122 (37%), Gaps = 18/122 (14%)
Query: 295 LTRENIKAFVMNIFGAGTDTSSITVEWGLAELINKPEVMEKARQEIDSVVGKSRIVEESD 354
+T E V ++ AG DT+ + + L P+ + R +
Sbjct: 236 ITPEEAPLLVRSLLSAGLDTTVNGIAAAVYCLARFPDEFARLRAD--------------- 280
Query: 355 IPSLPYMQAVVKEILRLHPTGPLVVRESSEDCTIADYRIPAKTRLFVNLWSLGRDPNHWE 414
PSL + +E +R R ++ D +A I ++ + L S RDP W+
Sbjct: 281 -PSL--ARNAFEEAVRFESPVQTFFRTTTRDVELAGATIGEGEKVLMFLGSANRDPRRWD 337
Query: 415 NP 416
+P
Sbjct: 338 DP 339
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 28.5 bits (62), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 26/52 (50%), Gaps = 3/52 (5%)
Query: 114 SDFATVHYGPYWKFIKKLCMTELL-GGRTLDQLR--PIREEETKRFLRLMLK 162
S + T +YG Y K K + E L GG LD L P+ E + LR +LK
Sbjct: 84 SPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIATILREILK 135
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 28.5 bits (62), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 27/52 (51%), Gaps = 3/52 (5%)
Query: 114 SDFATVHYGPYWKFIKKLCMTELLGGRT-LDQLR--PIREEETKRFLRLMLK 162
S + T +YG Y K K + E LGG + LD L P+ E + LR +LK
Sbjct: 79 SPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIATILREILK 130
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 28.1 bits (61), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 27/52 (51%), Gaps = 3/52 (5%)
Query: 114 SDFATVHYGPYWKFIKKLCMTELLGGRT-LDQLR--PIREEETKRFLRLMLK 162
S + T +YG Y K K + E LGG + LD L P+ E + LR +LK
Sbjct: 64 SPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIATILREILK 115
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 28.1 bits (61), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 27/52 (51%), Gaps = 3/52 (5%)
Query: 114 SDFATVHYGPYWKFIKKLCMTELLGGRT-LDQLR--PIREEETKRFLRLMLK 162
S + T +YG Y K K + E LGG + LD L P+ E + LR +LK
Sbjct: 64 SPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIATILREILK 115
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.320 0.136 0.399
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,149,295
Number of Sequences: 62578
Number of extensions: 418358
Number of successful extensions: 1540
Number of sequences better than 100.0: 145
Number of HSP's better than 100.0 without gapping: 103
Number of HSP's successfully gapped in prelim test: 42
Number of HSP's that attempted gapping in prelim test: 1337
Number of HSP's gapped (non-prelim): 164
length of query: 422
length of database: 14,973,337
effective HSP length: 101
effective length of query: 321
effective length of database: 8,652,959
effective search space: 2777599839
effective search space used: 2777599839
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 53 (25.0 bits)