BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 045628
(142 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9LU15|AHP4_ARATH Histidine-containing phosphotransfer protein 4 OS=Arabidopsis
thaliana GN=AHP4 PE=1 SV=2
Length = 127
Score = 184 bits (466), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 84/116 (72%), Positives = 100/116 (86%)
Query: 21 QGHLDEQFILLEELQDDANPNFVEEVVTLHYRDSARLITTIERALEKSPLDFNKLDGYMH 80
QG+LDEQF+ LEELQDDANPNFVEEV L+++DSARLI I++ALE+ DFN+LD YMH
Sbjct: 9 QGYLDEQFMELEELQDDANPNFVEEVSALYFKDSARLINNIDQALERGSFDFNRLDSYMH 68
Query: 81 QFKGSSTSIGAKKVKAESTQFREYCEAGNGEGCMKTFQLLKRDYATLRRKLEAYFQ 136
QFKGSSTSIGA KVKAE T FREYC AGN EGC++TFQ LK++++TLR+KLE YFQ
Sbjct: 69 QFKGSSTSIGASKVKAECTTFREYCRAGNAEGCLRTFQQLKKEHSTLRKKLEHYFQ 124
>sp|Q9ZNV8|AHP2_ARATH Histidine-containing phosphotransfer protein 2 OS=Arabidopsis
thaliana GN=AHP2 PE=1 SV=1
Length = 156
Score = 121 bits (303), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 58/131 (44%), Positives = 88/131 (67%), Gaps = 1/131 (0%)
Query: 6 QLRRQLASMRQSLFDQGHLDEQFILLEELQDDANPNFVEEVVTLHYRDSARLITTIERAL 65
QL+RQ SL+ QG LD+QF L++LQDD +P+FV EV++L + D +LI+ + RAL
Sbjct: 7 QLQRQFRDYTISLYQQGFLDDQFTELKKLQDDGSPDFVSEVLSLFFEDCVKLISNMARAL 66
Query: 66 EKS-PLDFNKLDGYMHQFKGSSTSIGAKKVKAESTQFREYCEAGNGEGCMKTFQLLKRDY 124
+ + +DF+++ +HQ KGSS+S+GAK+VK F+E CEA N EGC++ Q + +Y
Sbjct: 67 DTTGTVDFSQVGASVHQLKGSSSSVGAKRVKTLCVSFKECCEAKNYEGCVRCLQQVDIEY 126
Query: 125 ATLRRKLEAYF 135
L+ KL+ F
Sbjct: 127 KALKTKLQDMF 137
>sp|Q6VAK4|HP1_ORYSJ Histidine-containing phosphotransfer protein 1 OS=Oryza sativa
subsp. japonica GN=HP1 PE=1 SV=1
Length = 149
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 57/131 (43%), Positives = 84/131 (64%), Gaps = 1/131 (0%)
Query: 7 LRRQLASMRQSLFDQGHLDEQFILLEELQDDA-NPNFVEEVVTLHYRDSARLITTIERAL 65
LR QL ++ S+F QG +DEQF L+ LQD+ P FV EVVTL D+ R+I I L
Sbjct: 6 LRDQLTALLSSMFSQGLVDEQFQQLQMLQDEGGTPGFVSEVVTLFCDDADRIINEIATLL 65
Query: 66 EKSPLDFNKLDGYMHQFKGSSTSIGAKKVKAESTQFREYCEAGNGEGCMKTFQLLKRDYA 125
E+ ++F+K+D Y+HQ KGSS S+GA+KVK QFR++C+ + +GC+ +++ D+
Sbjct: 66 EQPVVNFDKVDAYVHQLKGSSASVGAQKVKFTCMQFRQFCQDKSRDGCLMALAVVRNDFY 125
Query: 126 TLRRKLEAYFQ 136
LR K + Q
Sbjct: 126 DLRNKFQTMLQ 136
>sp|Q9SAZ5|AHP3_ARATH Histidine-containing phosphotransfer protein 3 OS=Arabidopsis
thaliana GN=AHP3 PE=1 SV=2
Length = 155
Score = 115 bits (288), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 56/131 (42%), Positives = 87/131 (66%), Gaps = 1/131 (0%)
Query: 6 QLRRQLASMRQSLFDQGHLDEQFILLEELQDDANPNFVEEVVTLHYRDSARLITTIERAL 65
QL+R+ SL+ QG LD+QF L++LQD+ +P+FV EVVTL + D +LI+ + RAL
Sbjct: 7 QLQRRFCDFTISLYHQGFLDDQFTELKKLQDECSPDFVAEVVTLFFEDCEKLISNMARAL 66
Query: 66 EKSP-LDFNKLDGYMHQFKGSSTSIGAKKVKAESTQFREYCEAGNGEGCMKTFQLLKRDY 124
+++ +DF + +HQ KGSS+S+GAK+VK +E C++ N EGC++ Q + +Y
Sbjct: 67 DQTGNVDFKLVGSSVHQLKGSSSSVGAKRVKGLCVTLKECCDSQNYEGCVRCLQQVDIEY 126
Query: 125 ATLRRKLEAYF 135
TL+ KL+ F
Sbjct: 127 KTLKAKLQDLF 137
>sp|Q8L9T7|AHP5_ARATH Histidine-containing phosphotransfer protein 5 OS=Arabidopsis
thaliana GN=AHP5 PE=1 SV=2
Length = 157
Score = 114 bits (284), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 56/131 (42%), Positives = 84/131 (64%), Gaps = 1/131 (0%)
Query: 6 QLRRQLASMRQSLFDQGHLDEQFILLEELQDDANPNFVEEVVTLHYRDSARLITTIERAL 65
QL+RQ SL+ QG LD QF L +LQD+ P+FV EVV+L + D ++LI T+ +L
Sbjct: 8 QLQRQFQDYIVSLYQQGFLDNQFSELRKLQDEGTPDFVAEVVSLFFDDCSKLINTMSISL 67
Query: 66 EKSP-LDFNKLDGYMHQFKGSSTSIGAKKVKAESTQFREYCEAGNGEGCMKTFQLLKRDY 124
E+ +DF ++D +HQ KGSS+S+GA++VK F+E C+ N EGC++ Q + +Y
Sbjct: 68 ERPDNVDFKQVDSGVHQLKGSSSSVGARRVKNVCISFKECCDVQNREGCLRCLQQVDYEY 127
Query: 125 ATLRRKLEAYF 135
L+ KL+ F
Sbjct: 128 KMLKTKLQDLF 138
>sp|Q9ZNV9|AHP1_ARATH Histidine-containing phosphotransfer protein 1 OS=Arabidopsis
thaliana GN=AHP1 PE=1 SV=1
Length = 154
Score = 106 bits (265), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 55/131 (41%), Positives = 90/131 (68%)
Query: 6 QLRRQLASMRQSLFDQGHLDEQFILLEELQDDANPNFVEEVVTLHYRDSARLITTIERAL 65
Q ++ L +SLF +G LD QF+ L++LQD++NP+FV +VVTL ++DS R++ + +L
Sbjct: 5 QKQKSLQDYTKSLFLEGILDSQFLQLQQLQDESNPDFVSQVVTLFFQDSDRILNDLSLSL 64
Query: 66 EKSPLDFNKLDGYMHQFKGSSTSIGAKKVKAESTQFREYCEAGNGEGCMKTFQLLKRDYA 125
++ +DF K+D ++HQ KGSS+SIGA++VK FR +CE N E C + Q +K++Y
Sbjct: 65 DQQVVDFKKVDPHVHQLKGSSSSIGAQRVKNACVVFRSFCEQQNVEACHRCLQQVKQEYY 124
Query: 126 TLRRKLEAYFQ 136
++ +LE F+
Sbjct: 125 LVKNRLETLFK 135
>sp|Q9SSC9|AHP6_ARATH Histidine-containing phosphotransfer protein 6 OS=Arabidopsis
thaliana GN=AHP6 PE=2 SV=2
Length = 154
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 80/132 (60%), Gaps = 1/132 (0%)
Query: 6 QLRRQLASMRQSLFDQGHLDEQFILLEELQDDANPNFVEEVVTLHYRDSAR-LITTIERA 64
+L+ + + SLF QG LDEQF+ L++LQD+ +PNFV +V+ +++ +S + L
Sbjct: 8 RLQADINRLLASLFHQGVLDEQFLQLQQLQDETSPNFVYDVINIYFDESEKLLRNLRLLL 67
Query: 65 LEKSPLDFNKLDGYMHQFKGSSTSIGAKKVKAESTQFREYCEAGNGEGCMKTFQLLKRDY 124
+++ D+ K+ +++Q GSS+SIGA++V+ FR E N GC++ ++++ +Y
Sbjct: 68 MDREFSDYKKIGLHLNQLVGSSSSIGARRVRNVCVAFRSASELSNRPGCLRGLEVVEHEY 127
Query: 125 ATLRRKLEAYFQ 136
L+ + FQ
Sbjct: 128 HYLKNMMHELFQ 139
>sp|O94321|MPR1_SCHPO Multistep phosphorelay regulator 1 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=mpr1 PE=1 SV=1
Length = 295
Score = 37.7 bits (86), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 46/102 (45%), Gaps = 11/102 (10%)
Query: 14 MRQSLFDQGHLDEQFILLEELQDDANPNFVEEVVTLHYRDSARLITTIERALEKSPLDFN 73
+ S+FDQ L E+ DD F + +V ++ + I +++ALE D
Sbjct: 166 IDHSVFDQ---------LLEMDDDDEHEFSKSIVWNYFEQAETTIADLQKALEAK--DLK 214
Query: 74 KLDGYMHQFKGSSTSIGAKKVKAESTQFREYCEAGNGEGCMK 115
KL H KGSS +G K++ + + Y + +G MK
Sbjct: 215 KLSSLGHFLKGSSAVLGLTKMRKVCERIQNYGSLRSRDGVMK 256
>sp|A1RYD4|VATE_THEPD V-type ATP synthase subunit E OS=Thermofilum pendens (strain Hrk 5)
GN=atpE PE=3 SV=1
Length = 215
Score = 32.0 bits (71), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 55/118 (46%), Gaps = 11/118 (9%)
Query: 33 ELQDDANPNFVEEVV-TLHYRDSARLITTIERALEKSPLDFNKLDGYMHQFKGSSTSIG- 90
EL + A +EE V T+ D R T +E++LEK + + D +H +GS++ +G
Sbjct: 88 ELIESALNRAIEEAVKTILGNDDYRR-TFLEKSLEKGVVALSSTDLVVHPCRGSASIVGQ 146
Query: 91 -AKKVKAESTQFRE--YCEAGNGEGCMKTFQLLKRD-----YATLRRKLEAYFQQALP 140
+ V A ++ + E G+ GC + ++ RD ATL K+ + P
Sbjct: 147 VVEAVAARLSKVKPGLRLEIGDPLGCTEGVVIVSRDGREIYNATLEAKIAEVRESVKP 204
>sp|A1TYW9|NRDR_MARAV Transcriptional repressor NrdR OS=Marinobacter aquaeolei (strain
ATCC 700491 / DSM 11845 / VT8) GN=nrdR PE=3 SV=1
Length = 172
Score = 30.8 bits (68), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 30/57 (52%)
Query: 40 PNFVEEVVTLHYRDSARLITTIERALEKSPLDFNKLDGYMHQFKGSSTSIGAKKVKA 96
P V++ T D +L I +ALEK P+ ++D +++ K S G ++VK+
Sbjct: 49 PRVVKQDGTRQPFDEEKLRAGIMKALEKRPVSIEEIDAALNRIKYRLRSTGEREVKS 105
>sp|B0KL66|NRDR_PSEPG Transcriptional repressor NrdR OS=Pseudomonas putida (strain GB-1)
GN=nrdR PE=3 SV=1
Length = 154
Score = 30.8 bits (68), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 15/57 (26%), Positives = 29/57 (50%)
Query: 40 PNFVEEVVTLHYRDSARLITTIERALEKSPLDFNKLDGYMHQFKGSSTSIGAKKVKA 96
P +++ T D +L ++RALEK P+ +L+ + K + G ++VK+
Sbjct: 49 PRLIKQDGTRQPFDEEKLRAGMQRALEKRPVSVERLEAALAHIKSRLRATGEREVKS 105
>sp|Q88QI0|NRDR_PSEPK Transcriptional repressor NrdR OS=Pseudomonas putida (strain
KT2440) GN=nrdR PE=3 SV=2
Length = 154
Score = 30.8 bits (68), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 15/57 (26%), Positives = 29/57 (50%)
Query: 40 PNFVEEVVTLHYRDSARLITTIERALEKSPLDFNKLDGYMHQFKGSSTSIGAKKVKA 96
P +++ T D +L ++RALEK P+ +L+ + K + G ++VK+
Sbjct: 49 PRLIKQDGTRQPFDEEKLRAGMQRALEKRPVSVERLEAALAHIKSRLRATGEREVKS 105
>sp|A5VXV6|NRDR_PSEP1 Transcriptional repressor NrdR OS=Pseudomonas putida (strain F1 /
ATCC 700007) GN=nrdR PE=3 SV=1
Length = 154
Score = 30.8 bits (68), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 15/57 (26%), Positives = 29/57 (50%)
Query: 40 PNFVEEVVTLHYRDSARLITTIERALEKSPLDFNKLDGYMHQFKGSSTSIGAKKVKA 96
P +++ T D +L ++RALEK P+ +L+ + K + G ++VK+
Sbjct: 49 PRLIKQDGTRQPFDEEKLRAGMQRALEKRPVSVERLEAALAHIKSRLRATGEREVKS 105
>sp|B1J3F1|NRDR_PSEPW Transcriptional repressor NrdR OS=Pseudomonas putida (strain W619)
GN=nrdR PE=3 SV=1
Length = 154
Score = 30.8 bits (68), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 15/57 (26%), Positives = 29/57 (50%)
Query: 40 PNFVEEVVTLHYRDSARLITTIERALEKSPLDFNKLDGYMHQFKGSSTSIGAKKVKA 96
P +++ T D +L ++RALEK P+ +L+ + K + G ++VK+
Sbjct: 49 PRLIKQDGTRQPFDEEKLRAGMQRALEKRPVSVERLEAALAHIKSRLRATGEREVKS 105
>sp|Q1IFM4|NRDR_PSEE4 Transcriptional repressor NrdR OS=Pseudomonas entomophila (strain
L48) GN=nrdR PE=3 SV=1
Length = 154
Score = 30.8 bits (68), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 15/57 (26%), Positives = 29/57 (50%)
Query: 40 PNFVEEVVTLHYRDSARLITTIERALEKSPLDFNKLDGYMHQFKGSSTSIGAKKVKA 96
P +++ T D +L ++RALEK P+ +L+ + K + G ++VK+
Sbjct: 49 PRLIKQDGTRQPFDEDKLRAGMQRALEKRPVSIERLEAALAHIKSRLRATGEREVKS 105
>sp|Q9LK50|AB26G_ARATH ABC transporter G family member 26 OS=Arabidopsis thaliana
GN=ABCG26 PE=2 SV=2
Length = 685
Score = 30.4 bits (67), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 41/91 (45%), Gaps = 9/91 (9%)
Query: 12 ASMRQSLFDQGHLDEQFILLEELQDDANPNF-----VEEVVTLHYRDSARLI-TTIERAL 65
A +R + +DE+F+ L+D P F VE V + SA L+ T + + +
Sbjct: 34 AYLRNQYSSEIDIDEEFVSTYPLEDAPLPIFLKFEDVEYKVRNSHASSANLVKTMVSKVV 93
Query: 66 EKSPLDFNKLDGYMHQFKGSSTSIGAKKVKA 96
+ D DGY H KG + S G ++ A
Sbjct: 94 THTNPD---PDGYKHILKGITGSTGPGEILA 121
>sp|A1SUU1|NRDR_PSYIN Transcriptional repressor NrdR OS=Psychromonas ingrahamii (strain
37) GN=nrdR PE=3 SV=1
Length = 151
Score = 30.4 bits (67), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 12/42 (28%), Positives = 25/42 (59%)
Query: 56 RLITTIERALEKSPLDFNKLDGYMHQFKGSSTSIGAKKVKAE 97
+L+ I RALEK P+ +D +++ K + + G ++V ++
Sbjct: 65 KLLVGINRALEKRPVSLEDIDAAVNKLKSTLRATGEREVTSK 106
>sp|Q2KV16|NRDR_BORA1 Transcriptional repressor NrdR OS=Bordetella avium (strain 197N)
GN=nrdR PE=3 SV=1
Length = 160
Score = 29.6 bits (65), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 19/73 (26%), Positives = 40/73 (54%), Gaps = 1/73 (1%)
Query: 25 DEQFILLEELQDDANPNFVEEVVTLHYRDSARLITTIERALEKSPLDFNKLDGYMHQFKG 84
D++F E ++ A P V+ + D+A+L ++ AL K P+ ++DG + + +
Sbjct: 35 DKRFTTYERVEL-AMPTVVKRDGSRSEYDAAKLRGSLALALRKRPVSTEEVDGAVARIED 93
Query: 85 SSTSIGAKKVKAE 97
+ + GA++V +E
Sbjct: 94 TLLASGAREVASE 106
>sp|B6HK90|SLX1_PENCW Structure-specific endonuclease subunit slx1 OS=Penicillium
chrysogenum (strain ATCC 28089 / DSM 1075 / Wisconsin
54-1255) GN=slx1 PE=3 SV=1
Length = 403
Score = 29.3 bits (64), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Query: 2 ERNQQLRRQLASMRQSLFDQGHLDEQFILLEE-LQDDANPNFVEEV 46
++ +++R++ A+M S + E LLEE QDD PN+ EEV
Sbjct: 319 KKEKRVRKESAAMEGSSVPRSSSTEPRSLLEEPTQDDLGPNWFEEV 364
>sp|B5YZ00|ENGB_ECO5E Probable GTP-binding protein EngB OS=Escherichia coli O157:H7
(strain EC4115 / EHEC) GN=engB PE=3 SV=1
Length = 210
Score = 29.3 bits (64), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 31/59 (52%), Gaps = 3/59 (5%)
Query: 83 KGSSTSIGAKKVKAESTQFREYCEAGNGEGCMKTFQLLKRDYA-TLRRKLEAYFQQALP 140
K + GA+K A+ RE A NG+ ++TF LK+ LR+KL+ +F + P
Sbjct: 146 KADKLASGARK--AQLNMVREAVLAFNGDVQVETFSSLKKQGVDKLRQKLDTWFNEMQP 202
>sp|Q8X8H0|ENGB_ECO57 Probable GTP-binding protein EngB OS=Escherichia coli O157:H7
GN=engB PE=3 SV=1
Length = 210
Score = 29.3 bits (64), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 31/59 (52%), Gaps = 3/59 (5%)
Query: 83 KGSSTSIGAKKVKAESTQFREYCEAGNGEGCMKTFQLLKRDYA-TLRRKLEAYFQQALP 140
K + GA+K A+ RE A NG+ ++TF LK+ LR+KL+ +F + P
Sbjct: 146 KADKLASGARK--AQLNMVREAVLAFNGDVQVETFSSLKKQGVDKLRQKLDTWFNEMQP 202
>sp|C5BS89|NRDR_TERTT Transcriptional repressor NrdR OS=Teredinibacter turnerae (strain
ATCC 39867 / T7901) GN=nrdR PE=3 SV=1
Length = 155
Score = 28.9 bits (63), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 13/57 (22%), Positives = 30/57 (52%)
Query: 40 PNFVEEVVTLHYRDSARLITTIERALEKSPLDFNKLDGYMHQFKGSSTSIGAKKVKA 96
P +++ T D +L ++RALEK P+ ++ +H + ++G +++K+
Sbjct: 49 PKVIKQDGTREPFDEEKLRNGLQRALEKRPVSVEAIETALHNVRHYLQALGEREIKS 105
>sp|Q31UD0|ENGB_SHIBS Probable GTP-binding protein EngB OS=Shigella boydii serotype 4
(strain Sb227) GN=engB PE=3 SV=2
Length = 210
Score = 28.9 bits (63), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 31/59 (52%), Gaps = 3/59 (5%)
Query: 83 KGSSTSIGAKKVKAESTQFREYCEAGNGEGCMKTFQLLKRDYA-TLRRKLEAYFQQALP 140
K + GA+K A+ RE A NG+ ++TF LK+ LR+KL+ +F + P
Sbjct: 146 KADKLASGARK--AQLNMVREAVLAFNGDVQVETFSSLKKQGVDKLRQKLDTWFSEMQP 202
>sp|Q3YVA8|ENGB_SHISS Probable GTP-binding protein EngB OS=Shigella sonnei (strain Ss046)
GN=engB PE=3 SV=2
Length = 210
Score = 28.9 bits (63), Expect = 10.0, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 31/59 (52%), Gaps = 3/59 (5%)
Query: 83 KGSSTSIGAKKVKAESTQFREYCEAGNGEGCMKTFQLLKRDYA-TLRRKLEAYFQQALP 140
K + GA+K A+ RE A NG+ ++TF LK+ LR+KL+ +F + P
Sbjct: 146 KADKLASGARK--AQLNMVREAVLAFNGDVQVETFSSLKKQGVDKLRQKLDTWFSEMQP 202
>sp|Q32A36|ENGB_SHIDS Probable GTP-binding protein EngB OS=Shigella dysenteriae serotype
1 (strain Sd197) GN=engB PE=3 SV=2
Length = 210
Score = 28.9 bits (63), Expect = 10.0, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 31/59 (52%), Gaps = 3/59 (5%)
Query: 83 KGSSTSIGAKKVKAESTQFREYCEAGNGEGCMKTFQLLKRDYA-TLRRKLEAYFQQALP 140
K + GA+K A+ RE A NG+ ++TF LK+ LR+KL+ +F + P
Sbjct: 146 KADKLASGARK--AQLNMVREAVLAFNGDVQVETFSSLKKQGVDKLRQKLDTWFSEMQP 202
>sp|B2TVL1|ENGB_SHIB3 Probable GTP-binding protein EngB OS=Shigella boydii serotype 18
(strain CDC 3083-94 / BS512) GN=engB PE=3 SV=1
Length = 210
Score = 28.9 bits (63), Expect = 10.0, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 31/59 (52%), Gaps = 3/59 (5%)
Query: 83 KGSSTSIGAKKVKAESTQFREYCEAGNGEGCMKTFQLLKRDYA-TLRRKLEAYFQQALP 140
K + GA+K A+ RE A NG+ ++TF LK+ LR+KL+ +F + P
Sbjct: 146 KADKLASGARK--AQLNMVREAVLAFNGDVQVETFSSLKKQGVDKLRQKLDTWFSEMQP 202
>sp|Q1R448|ENGB_ECOUT Probable GTP-binding protein EngB OS=Escherichia coli (strain UTI89
/ UPEC) GN=engB PE=3 SV=2
Length = 210
Score = 28.9 bits (63), Expect = 10.0, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 31/59 (52%), Gaps = 3/59 (5%)
Query: 83 KGSSTSIGAKKVKAESTQFREYCEAGNGEGCMKTFQLLKRDYA-TLRRKLEAYFQQALP 140
K + GA+K A+ RE A NG+ ++TF LK+ LR+KL+ +F + P
Sbjct: 146 KADKLASGARK--AQLNMVREAVLAFNGDVQVETFSSLKKQGVDKLRQKLDTWFSEMQP 202
>sp|B1LMP7|ENGB_ECOSM Probable GTP-binding protein EngB OS=Escherichia coli (strain
SMS-3-5 / SECEC) GN=engB PE=3 SV=1
Length = 210
Score = 28.9 bits (63), Expect = 10.0, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 31/59 (52%), Gaps = 3/59 (5%)
Query: 83 KGSSTSIGAKKVKAESTQFREYCEAGNGEGCMKTFQLLKRDYA-TLRRKLEAYFQQALP 140
K + GA+K A+ RE A NG+ ++TF LK+ LR+KL+ +F + P
Sbjct: 146 KADKLASGARK--AQLNMVREAVLAFNGDVQVETFSSLKKQGVDKLRQKLDTWFSEMQP 202
>sp|P0A6P7|ENGB_ECOLI Probable GTP-binding protein EngB OS=Escherichia coli (strain K12)
GN=engB PE=1 SV=1
Length = 210
Score = 28.9 bits (63), Expect = 10.0, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 31/59 (52%), Gaps = 3/59 (5%)
Query: 83 KGSSTSIGAKKVKAESTQFREYCEAGNGEGCMKTFQLLKRDYA-TLRRKLEAYFQQALP 140
K + GA+K A+ RE A NG+ ++TF LK+ LR+KL+ +F + P
Sbjct: 146 KADKLASGARK--AQLNMVREAVLAFNGDVQVETFSSLKKQGVDKLRQKLDTWFSEMQP 202
>sp|B1IW48|ENGB_ECOLC Probable GTP-binding protein EngB OS=Escherichia coli (strain ATCC
8739 / DSM 1576 / Crooks) GN=engB PE=3 SV=1
Length = 210
Score = 28.9 bits (63), Expect = 10.0, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 31/59 (52%), Gaps = 3/59 (5%)
Query: 83 KGSSTSIGAKKVKAESTQFREYCEAGNGEGCMKTFQLLKRDYA-TLRRKLEAYFQQALP 140
K + GA+K A+ RE A NG+ ++TF LK+ LR+KL+ +F + P
Sbjct: 146 KADKLASGARK--AQLNMVREAVLAFNGDVQVETFSSLKKQGVDKLRQKLDTWFSEMQP 202
>sp|P0A6P8|ENGB_ECOL6 Probable GTP-binding protein EngB OS=Escherichia coli O6:H1 (strain
CFT073 / ATCC 700928 / UPEC) GN=engB PE=3 SV=1
Length = 210
Score = 28.9 bits (63), Expect = 10.0, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 31/59 (52%), Gaps = 3/59 (5%)
Query: 83 KGSSTSIGAKKVKAESTQFREYCEAGNGEGCMKTFQLLKRDYA-TLRRKLEAYFQQALP 140
K + GA+K A+ RE A NG+ ++TF LK+ LR+KL+ +F + P
Sbjct: 146 KADKLASGARK--AQLNMVREAVLAFNGDVQVETFSSLKKQGVDKLRQKLDTWFSEMQP 202
>sp|A8A6W6|ENGB_ECOHS Probable GTP-binding protein EngB OS=Escherichia coli O9:H4 (strain
HS) GN=engB PE=3 SV=1
Length = 210
Score = 28.9 bits (63), Expect = 10.0, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 31/59 (52%), Gaps = 3/59 (5%)
Query: 83 KGSSTSIGAKKVKAESTQFREYCEAGNGEGCMKTFQLLKRDYA-TLRRKLEAYFQQALP 140
K + GA+K A+ RE A NG+ ++TF LK+ LR+KL+ +F + P
Sbjct: 146 KADKLASGARK--AQLNMVREAVLAFNGDVQVETFSSLKKQGVDKLRQKLDTWFSEMQP 202
>sp|C5A033|ENGB_ECOBW Probable GTP-binding protein EngB OS=Escherichia coli (strain K12 /
MC4100 / BW2952) GN=engB PE=3 SV=1
Length = 210
Score = 28.9 bits (63), Expect = 10.0, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 31/59 (52%), Gaps = 3/59 (5%)
Query: 83 KGSSTSIGAKKVKAESTQFREYCEAGNGEGCMKTFQLLKRDYA-TLRRKLEAYFQQALP 140
K + GA+K A+ RE A NG+ ++TF LK+ LR+KL+ +F + P
Sbjct: 146 KADKLASGARK--AQLNMVREAVLAFNGDVQVETFSSLKKQGVDKLRQKLDTWFSEMQP 202
>sp|B7UNI7|ENGB_ECO27 Probable GTP-binding protein EngB OS=Escherichia coli O127:H6
(strain E2348/69 / EPEC) GN=engB PE=3 SV=1
Length = 210
Score = 28.9 bits (63), Expect = 10.0, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 31/59 (52%), Gaps = 3/59 (5%)
Query: 83 KGSSTSIGAKKVKAESTQFREYCEAGNGEGCMKTFQLLKRDYA-TLRRKLEAYFQQALP 140
K + GA+K A+ RE A NG+ ++TF LK+ LR+KL+ +F + P
Sbjct: 146 KADKLASGARK--AQLNMVREAVLAFNGDVQVETFSSLKKQGVDKLRQKLDTWFSEMQP 202
>sp|A7ZU66|ENGB_ECO24 Probable GTP-binding protein EngB OS=Escherichia coli O139:H28
(strain E24377A / ETEC) GN=engB PE=3 SV=1
Length = 210
Score = 28.9 bits (63), Expect = 10.0, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 31/59 (52%), Gaps = 3/59 (5%)
Query: 83 KGSSTSIGAKKVKAESTQFREYCEAGNGEGCMKTFQLLKRDYA-TLRRKLEAYFQQALP 140
K + GA+K A+ RE A NG+ ++TF LK+ LR+KL+ +F + P
Sbjct: 146 KADKLASGARK--AQLNMVREAVLAFNGDVQVETFSSLKKQGVDKLRQKLDTWFSEMQP 202
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.133 0.373
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 49,957,283
Number of Sequences: 539616
Number of extensions: 1900962
Number of successful extensions: 5361
Number of sequences better than 100.0: 44
Number of HSP's better than 100.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 28
Number of HSP's that attempted gapping in prelim test: 5339
Number of HSP's gapped (non-prelim): 45
length of query: 142
length of database: 191,569,459
effective HSP length: 105
effective length of query: 37
effective length of database: 134,909,779
effective search space: 4991661823
effective search space used: 4991661823
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 55 (25.8 bits)