BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 045630
(240 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8RWE8|GGAP1_ARATH GDP-L-galactose phosphorylase 1 OS=Arabidopsis thaliana GN=VTC2
PE=1 SV=1
Length = 442
Score = 337 bits (864), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 164/239 (68%), Positives = 194/239 (81%), Gaps = 11/239 (4%)
Query: 13 HYDITAYETKVISGQYGFIAQLNYPRHLKERPAEFRVEKVYQ-----------MGQEEVL 61
YD+TA ETKVI G+YGF+AQLN RHLK+RP EFRV+KV Q +GQEE+L
Sbjct: 88 RYDVTACETKVIPGKYGFVAQLNEGRHLKKRPTEFRVDKVLQSFDGSKFNFTKVGQEELL 147
Query: 62 FQFEASEDCEVQFHLSAPFDVENSPSVVSINVSPIKYGHVLLIPRVLECLLQRIDCVSFL 121
FQFEA ED +VQF P D ENSPSVV+INVSPI+YGHVLLIPRVL+CL QRID S L
Sbjct: 148 FQFEAGEDAQVQFFPCMPIDPENSPSVVAINVSPIEYGHVLLIPRVLDCLPQRIDHKSLL 207
Query: 122 LALYTAAGAGNPHFRLGYNSLGAFATINHLHFQASYMALPFPIQKAPTRKIITSGGCVKI 181
LA++ AA A NP+FRLGYNSLGAFATINHLHFQA Y+A+PFP++KAPT+KI T+ VKI
Sbjct: 208 LAVHMAAEAANPYFRLGYNSLGAFATINHLHFQAYYLAMPFPLEKAPTKKITTTVSGVKI 267
Query: 182 SELFNYPVRGLVFEGGNSLQDLSNTVSDACVCLQENNIPYNVLIVDCGKRIFLFPQRYA 240
SEL +YPVR L+FEGG+S+Q+LS+TVSD CVCLQ NNIP+N+LI DCG++IFL PQ YA
Sbjct: 268 SELLSYPVRSLLFEGGSSMQELSDTVSDCCVCLQNNNIPFNILISDCGRQIFLMPQCYA 326
>sp|Q9FLP9|GGAP2_ARATH GDP-L-galactose phosphorylase 2 OS=Arabidopsis thaliana GN=VTC5
PE=1 SV=1
Length = 431
Score = 327 bits (837), Expect = 7e-89, Method: Compositional matrix adjust.
Identities = 163/242 (67%), Positives = 191/242 (78%), Gaps = 14/242 (5%)
Query: 13 HYDITAYETKVISGQYGFIAQLNYPRHLKERPAEFRVEKVYQ-----------MGQEEVL 61
YD+TA ETKVI G+YGFIAQLN RHLK+RP EFRV+KV Q +GQEE+L
Sbjct: 82 RYDVTACETKVIPGKYGFIAQLNEGRHLKKRPTEFRVDKVLQPFDGNKFNFTKVGQEELL 141
Query: 62 FQFEAS---EDCEVQFHLSAPFDVENSPSVVSINVSPIKYGHVLLIPRVLECLLQRIDCV 118
FQF+AS +D E+QF S P D +NSPSVV+INVSPI+YGHVLLIPRVL+CL QRID
Sbjct: 142 FQFKASTNDDDSEIQFLASMPLDADNSPSVVAINVSPIEYGHVLLIPRVLDCLPQRIDHK 201
Query: 119 SFLLALYTAAGAGNPHFRLGYNSLGAFATINHLHFQASYMALPFPIQKAPTRKIITSGGC 178
S LLAL AA A NP+FRLGYNSLGAFATINHLHFQA Y+A+ FPI+KA + KI T+
Sbjct: 202 SLLLALQMAAEADNPYFRLGYNSLGAFATINHLHFQAYYLAMQFPIEKASSLKITTTNNG 261
Query: 179 VKISELFNYPVRGLVFEGGNSLQDLSNTVSDACVCLQENNIPYNVLIVDCGKRIFLFPQR 238
VKIS+L NYPVRGL+ EGGN+++DL++TVSDA VCLQ NNIP+N+LI D GKRIFL PQ
Sbjct: 262 VKISKLLNYPVRGLLVEGGNTIKDLADTVSDASVCLQNNNIPFNILISDSGKRIFLLPQC 321
Query: 239 YA 240
YA
Sbjct: 322 YA 323
>sp|Q6ZNW5|GDPP1_HUMAN GDP-D-glucose phosphorylase 1 OS=Homo sapiens GN=GDPGP1 PE=1 SV=2
Length = 385
Score = 103 bits (258), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 67/220 (30%), Positives = 111/220 (50%), Gaps = 12/220 (5%)
Query: 14 YDITAYETKVISGQYGFIAQLNYPRHLKERPAEFRVEKVYQMGQEEVLFQFEASEDCEVQ 73
Y + +T+++ G GF+AQLN R ++ RP + K + + V F F EV
Sbjct: 78 YRLRELQTQILPGAVGFVAQLNVERGVQRRPPQ--TIKSVRQAFDPVQFNFNKIRPGEVL 135
Query: 74 FHLSAPFDVENS----PSVVSINVSPIKYGHVLLIPRVLECLLQRIDCVSFLLALYTAAG 129
F L D+ + +V INVSP+++GHVLL+P L QR+ + +
Sbjct: 136 FRLHREPDLPGTLLQEDILVVINVSPLEWGHVLLVPEPARQLPQRLLPGALRAGIEAVLL 195
Query: 130 AGNPHFRLGYNSLGAFATINHLHFQASYMALPFPIQKAPTRKIITSGGCVKISELFNYPV 189
+ +P FR+G+NSLG A++NHLH Y+A P+++AP+ + GG + + L + P
Sbjct: 196 SLHPGFRVGFNSLGGLASVNHLHLHGYYLAHRLPVEQAPSEP-LDPGGHLHL--LQDLPA 252
Query: 190 RGLVFEGGNSLQDLSNTVSDACVC---LQENNIPYNVLIV 226
G +F DL + +S C L ++ I +N+ +
Sbjct: 253 PGFLFYTRGPGPDLESLISRVCRATDYLTDHEIAHNLFVT 292
>sp|Q3TLS3|GDPP1_MOUSE GDP-D-glucose phosphorylase 1 OS=Mus musculus GN=Gdpgp1 PE=2 SV=2
Length = 386
Score = 102 bits (254), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 68/224 (30%), Positives = 108/224 (48%), Gaps = 17/224 (7%)
Query: 13 HYDITAYETKVISGQYGFIAQLNYPRHLKERPAEFRVEKVYQMGQE--EVLFQFEASEDC 70
Y + +T+++ G GF+AQLN R ++ R R + + + QE F F
Sbjct: 77 RYRLEDLQTQILPGSVGFVAQLNIERGIQRR----RPQNIRSVRQEFDPEQFNFNKIRPG 132
Query: 71 EVQFHLSAPFDVENSPS-----VVSINVSPIKYGHVLLIPRVLECLLQRIDCVSFLLALY 125
EV F + +P +V INVSP+++GHVLL+P + L QR+ + L
Sbjct: 133 EVLFRMQREPKGPATPKQEDDVLVVINVSPLEWGHVLLVPAPAQGLPQRLLPGVLRVGLE 192
Query: 126 TAAGAGNPHFRLGYNSLGAFATINHLHFQASYMALPFPIQKAPTRKIITSGGCVKISELF 185
+ +P FR+G+NSLG A++NHLH Y+A P P++ AP+ + GC+ + L
Sbjct: 193 AVLLSLHPGFRVGFNSLGGLASVNHLHLHCYYLAHPLPVEGAPSTP-LDPKGCIHL--LQ 249
Query: 186 NYPVRGLVFEGGNSLQDLSNTVSDACVC---LQENNIPYNVLIV 226
P G +F DL +S C L + I +N+ +
Sbjct: 250 ALPAPGFLFYTSGPGPDLEVLISRVCRATDYLSDREIAHNLFVT 293
>sp|Q5E9T1|GDPP1_BOVIN GDP-D-glucose phosphorylase 1 OS=Bos taurus GN=GDPGP1 PE=2 SV=1
Length = 385
Score = 100 bits (250), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 71/251 (28%), Positives = 114/251 (45%), Gaps = 37/251 (14%)
Query: 14 YDITAYETKVISGQYGFIAQLNY--------PRHLKERPAEFRVEKVY--QMGQEEVLFQ 63
Y + T+ + G GF+AQLN P+++K EF E+ Q+ EVLF+
Sbjct: 78 YPLGELPTQTLPGTVGFVAQLNVERGVQRRCPQNIKSVRQEFDPEQFNFNQIRPGEVLFR 137
Query: 64 FEASEDCEVQFHLSAPFDVENSPSVVSINVSPIKYGHVLLIPRVLECLLQRIDCVSFLLA 123
+DC V+ +V INVSP+++GHVLL+P L QR+ +
Sbjct: 138 LHRKQDCS--------GTVQQEDILVVINVSPLEWGHVLLVPEPARGLPQRLLPGALRAG 189
Query: 124 LYTAAGAGNPHFRLGYNSLGAFATINHLHFQASYMALPFPIQKAPTRKIITSGGCVKISE 183
+ + +P FR+G+NSLG A++NHLH Y+A P++ AP+ + G ++
Sbjct: 190 VEAVLLSSHPGFRVGFNSLGGLASVNHLHLHGYYLAHRLPVEGAPSEPLDPRG---RLHV 246
Query: 184 LFNYPVRGLVFEGGNSLQDLSNTVSDACVC---LQENNIPYNVLIVD------------- 227
L P G +F DL +S C L + I +N+ +
Sbjct: 247 LQALPAPGFLFYTSRPGPDLEALISRVCRATDYLTDCEIAHNLFVTRGAPPGKATSSSAL 306
Query: 228 CGKRIFLFPQR 238
G R+ L+P++
Sbjct: 307 SGVRVILWPRK 317
>sp|Q08CA1|GDPP1_DANRE GDP-D-glucose phosphorylase 1 OS=Danio rerio GN=gdpgp1 PE=2 SV=1
Length = 343
Score = 97.4 bits (241), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 110/215 (51%), Gaps = 12/215 (5%)
Query: 14 YDITAYETKVISGQYGFIAQLNYPRHLKER-PAE-FRVEKVYQMGQEEVLFQFEASEDCE 71
Y + ET+++ G G+IAQLN R + R P E V + + Q F F E
Sbjct: 50 YRLDELETRILPGSRGYIAQLNIMRGTERRKPQEILSVRQNFDPKQ----FNFNKINPKE 105
Query: 72 VQFHLSAPFDVENSPSVVSINVSPIKYGHVLLIPRVLECLLQRIDCVSFLLALYTAAGAG 131
+ F L + E SV+ INVSP+++GH LL+P +C Q + ++ + T +
Sbjct: 106 LLFELKR--ESERKCSVI-INVSPLEFGHCLLVPEPEKCFPQVLTHLAVQTGIETVLLSA 162
Query: 132 NPHFRLGYNSLGAFATINHLHFQASYMALPFPIQKAPTRKIITSGGCVKISELFNYPVRG 191
+P FR+G+NSLG FA++NHLH Y+ I+ +P + ++ + + + EL ++P
Sbjct: 163 DPGFRVGFNSLGGFASVNHLHLHGYYLNHRLKIESSPAKLVLPN---LNLYELVDFPSGF 219
Query: 192 LVFEGGNSLQDLSNTVSDACVCLQENNIPYNVLIV 226
L + G +L + + L ++NI +N+ +
Sbjct: 220 LFYTQGPNLDLVVKAICSLTDVLVDHNIAHNLFLT 254
>sp|Q8HXE4|GDPP1_MACFA GDP-D-glucose phosphorylase 1 OS=Macaca fascicularis GN=GDPGP1 PE=2
SV=1
Length = 385
Score = 95.1 bits (235), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 108/220 (49%), Gaps = 12/220 (5%)
Query: 14 YDITAYETKVISGQYGFIAQLNYPRHLKERPAEFRVEKVYQMGQEEVLFQFEASEDCEVQ 73
Y + +T+++ G GF+AQLN R ++ R + ++ V Q E F F + EV
Sbjct: 78 YRLRELQTQILPGVVGFVAQLNVERGVQRRRPQ-TIKSVRQAFDPEQ-FNFNKIQPGEVL 135
Query: 74 FHLSAPFDVENS----PSVVSINVSPIKYGHVLLIPRVLECLLQRIDCVSFLLALYTAAG 129
+ L D+ + +V INVSP+++GHVLL+P L QR+ + +
Sbjct: 136 YRLHREPDLPGTLLQEDILVVINVSPLEWGHVLLVPEPARGLPQRLLPGALRAGIEAVLL 195
Query: 130 AGNPHFRLGYNSLGAFATINHLHFQASYMALPFPIQKAPTRKIITSGGCVKISELFNYPV 189
+ +P FR+G+NSLG A++NHLH Y+A P+++AP+ + G + L P
Sbjct: 196 SLHPGFRVGFNSLGGLASVNHLHLHGYYLAHRLPVEQAPSEPLDPGG---HLHLLQGLPA 252
Query: 190 RGLVFEGGNSLQDLSNTVSDACVC---LQENNIPYNVLIV 226
G +F DL + + C L ++ I +N+ +
Sbjct: 253 PGFLFYTRGPGLDLESLICRVCRATDYLTDHEIAHNLFVT 292
>sp|Q0V9F1|GDPP1_XENTR GDP-D-glucose phosphorylase 1 OS=Xenopus tropicalis GN=gdpgp1 PE=2
SV=1
Length = 399
Score = 86.3 bits (212), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/256 (25%), Positives = 116/256 (45%), Gaps = 42/256 (16%)
Query: 14 YDITAYETKVISGQYGFIAQLNYPRHLKERPAE--FRVEKVYQMGQ--------EEVLFQ 63
Y + +TK++ G ++AQLN R + R E + V++ + Q EE++FQ
Sbjct: 65 YPLRNVQTKILPGSVSYVAQLNIQRSINRRKPEDIWSVQQKFNPNQFNYNKIKSEEIVFQ 124
Query: 64 FEASE-DCEVQFHL----------------------SAPFDVENSPSVVSINVSPIKYGH 100
SE + V H+ S + ++S ++V INVSP+++GH
Sbjct: 125 MIRSEAEHSVDSHIVQGSMVNGMGSSECKSGSTPQGSCTLECKSSCTLVVINVSPLEFGH 184
Query: 101 VLLIPRVLECLLQRIDCVSFLLALYTAAGAGNPHFRLGYNSLGAFATINHLHFQASYMAL 160
VL +P CL Q + L + + + +P FR+G+NSLG FA++NHLH Y+
Sbjct: 185 VLFMPDPSLCLPQILTENLMLFGMESVFLSSHPGFRVGFNSLGGFASVNHLHLHGFYLDH 244
Query: 161 PFPIQKAPTRKIITSGGCVKISELFNYPVRGLVF-EGGNSLQDLSNTVSDACVCLQENNI 219
I+ + ++ + + + ++P G +F G L+ + + L NI
Sbjct: 245 ELLIESSCSKPLCPE---INFHLVTHFPAPGFLFYTDGKDLKSTAQKICKVTDFLVAKNI 301
Query: 220 PYNVLIV-----DCGK 230
+N+ + D GK
Sbjct: 302 AHNLFVTRGSNPDTGK 317
>sp|A8E5Y3|GDPP1_XENLA GDP-D-glucose phosphorylase 1 OS=Xenopus laevis GN=gdpgp1 PE=2 SV=1
Length = 399
Score = 80.9 bits (198), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 61/247 (24%), Positives = 109/247 (44%), Gaps = 37/247 (14%)
Query: 14 YDITAYETKVISGQYGFIAQLNYPRHLKERPAE--FRVEKVYQMGQ--------EEVLFQ 63
Y + +TK++ G ++AQLN R + R E + +++ + Q EE++FQ
Sbjct: 66 YPLRNLQTKILPGSLSYVAQLNIQRSINRRKPEDIWSIQQKFNPNQFNYNKIKPEEIVFQ 125
Query: 64 FEASE---------------------DCEV--QFHLSAPFDVENSPSVVSINVSPIKYGH 100
SE DC+ + + ++V INVSP+++GH
Sbjct: 126 MIRSETEHCVDSDKVHGSSVNGMGTSDCKSGSTHQRCCILECKGGCTLVVINVSPLEFGH 185
Query: 101 VLLIPRVLECLLQRIDCVSFLLALYTAAGAGNPHFRLGYNSLGAFATINHLHFQASYMAL 160
VL +P CL Q + L L + + +P FR+G+NSLG FA++NHLH Y+
Sbjct: 186 VLFMPDPSLCLPQILTEDLMLFGLESVLLSAHPGFRVGFNSLGGFASVNHLHLHGFYLDH 245
Query: 161 PFPIQKAPTRKIITSGGCVKISELFNYPVRGLVF-EGGNSLQDLSNTVSDACVCLQENNI 219
I+ + ++ + + + ++P +F G +L+ + + L NI
Sbjct: 246 DLFIESSSSKPLCPE---MNFHLITHFPAPSFLFYTDGRNLKSTAQNICKVTDFLVAKNI 302
Query: 220 PYNVLIV 226
+N+ I
Sbjct: 303 AHNLFIT 309
>sp|Q5ZR76|GDPP1_CAEEL GDP-D-glucose phosphorylase 1 OS=Caenorhabditis elegans GN=gdpgp1
PE=1 SV=1
Length = 482
Score = 56.2 bits (134), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 67/141 (47%), Gaps = 8/141 (5%)
Query: 22 KVISGQYGFIAQLNYPR-HLKERPAEFRVEKVYQMGQEEVLFQFEASEDCEVQFHLSAPF 80
+ + G+Y QLN R L+ +P F K + + F F D E+ F+L
Sbjct: 123 RCLDGKYDLSMQLNIERGELRRKPMHF---KNIKEPFNHLRFNFAKLHDHEILFYLKCDT 179
Query: 81 D-VENS---PSVVSINVSPIKYGHVLLIPRVLECLLQRIDCVSFLLALYTAAGAGNPHFR 136
D + N +V++N SP++ H L++P V +C Q + + +A+ + F
Sbjct: 180 DPISNDLLDRHLVAVNASPLERDHSLIVPSVNKCSPQVLTLQAVRIAVDLMLLVDDDMFH 239
Query: 137 LGYNSLGAFATINHLHFQASY 157
+ +NSL A++NHLH A Y
Sbjct: 240 ILFNSLLGQASVNHLHLHAMY 260
>sp|Q4JCK7|DTDA_SULAC D-tyrosyl-tRNA(Tyr) deacylase OS=Sulfolobus acidocaldarius (strain
ATCC 33909 / DSM 639 / JCM 8929 / NBRC 15157 / NCIMB
11770) GN=dtdA PE=3 SV=1
Length = 237
Score = 34.3 bits (77), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 29/63 (46%)
Query: 89 VSINVSPIKYGHVLLIPRVLECLLQRIDCVSFLLALYTAAGAGNPHFRLGYNSLGAFATI 148
V + P +G+ ++ ++E L ID VS L G G PH+ ++ LG I
Sbjct: 120 VEVGSDPTYWGNEKIVKSLVESTLSAIDKVSSLYCEEIIVGFGGPHYAPYFSKLGEKVCI 179
Query: 149 NHL 151
H+
Sbjct: 180 GHI 182
>sp|Q8D252|RPIA_WIGBR Ribose-5-phosphate isomerase A OS=Wigglesworthia glossinidia
brevipalpis GN=rpiA PE=3 SV=1
Length = 218
Score = 32.3 bits (72), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 38/82 (46%), Gaps = 10/82 (12%)
Query: 161 PFPIQKAPTRKIITSGGCVKISELFNYPVRGLVFEGGNSLQDLSNTVSDACVCLQE--NN 218
P PI+ P + + S + I Y +G++ E GN L D+ N + + L+E NN
Sbjct: 130 PLPIEVIPMARTLVSKKIIDIGGSPKYR-KGIITENGNVLLDVHNLIILDSLFLEEKINN 188
Query: 219 IPYNVLIVDCGKRIFLFPQRYA 240
IP +V G LF R A
Sbjct: 189 IPG---VVSVG----LFAHRAA 203
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.324 0.140 0.420
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 89,343,763
Number of Sequences: 539616
Number of extensions: 3642534
Number of successful extensions: 8736
Number of sequences better than 100.0: 13
Number of HSP's better than 100.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 8709
Number of HSP's gapped (non-prelim): 14
length of query: 240
length of database: 191,569,459
effective HSP length: 114
effective length of query: 126
effective length of database: 130,053,235
effective search space: 16386707610
effective search space used: 16386707610
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.5 bits)
S2: 59 (27.3 bits)