Query 045630
Match_columns 240
No_of_seqs 133 out of 157
Neff 5.5
Searched_HMMs 46136
Date Fri Mar 29 03:53:49 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/045630.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/045630hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN03103 GDP-L-galactose-hexos 100.0 3.2E-86 7E-91 620.9 23.0 236 5-240 78-326 (403)
2 KOG2720 Predicted hydrolase (H 100.0 5.3E-75 1.1E-79 531.5 12.3 231 6-240 85-322 (431)
3 cd01278 aprataxin_related apra 98.4 1.3E-06 2.9E-11 67.3 7.7 72 84-156 22-103 (104)
4 PRK10687 purine nucleoside pho 98.3 3.5E-06 7.6E-11 67.8 7.6 74 83-156 22-105 (119)
5 cd00468 HIT_like HIT family: H 98.2 6.5E-06 1.4E-10 60.6 7.7 73 84-156 4-85 (86)
6 cd01276 PKCI_related Protein K 98.2 8.6E-06 1.9E-10 62.6 7.9 73 84-156 20-102 (104)
7 COG0537 Hit Diadenosine tetrap 98.0 2.9E-05 6.3E-10 63.9 8.8 74 83-156 20-102 (138)
8 PF01230 HIT: HIT domain; Int 98.0 1.9E-05 4.1E-10 60.3 6.7 73 84-156 12-93 (98)
9 cd01275 FHIT FHIT (fragile his 97.8 0.00014 3.1E-09 58.1 8.5 73 84-156 20-101 (126)
10 PF11969 DcpS_C: Scavenger mRN 97.6 0.00026 5.7E-09 56.5 7.3 74 84-160 20-106 (116)
11 COG4360 APA2 ATP adenylyltrans 97.6 0.00022 4.8E-09 64.3 7.4 72 84-158 91-163 (298)
12 cd01277 HINT_subgroup HINT (hi 97.6 0.00047 1E-08 52.5 8.2 73 84-156 20-101 (103)
13 KOG3275 Zinc-binding protein o 97.4 0.00054 1.2E-08 55.5 6.7 73 84-156 36-117 (127)
14 PRK05270 galactose-1-phosphate 97.0 0.004 8.7E-08 60.9 9.0 123 94-224 212-353 (493)
15 TIGR01239 galT_2 galactose-1-p 96.9 0.0042 9E-08 60.7 8.7 123 94-224 209-350 (489)
16 PRK11720 galactose-1-phosphate 96.4 0.01 2.2E-07 56.0 7.4 74 83-156 215-300 (346)
17 COG4468 GalT Galactose-1-phosp 96.2 0.013 2.7E-07 56.5 6.9 123 94-224 214-355 (503)
18 KOG3379 Diadenosine polyphosph 96.0 0.0099 2.1E-07 49.5 4.3 67 87-156 26-104 (150)
19 TIGR00209 galT_1 galactose-1-p 95.8 0.024 5.2E-07 53.5 6.8 74 83-156 215-300 (347)
20 PLN02643 ADP-glucose phosphory 95.1 0.09 1.9E-06 49.4 7.9 74 83-156 214-298 (336)
21 cd00608 GalT Galactose-1-phosp 95.1 0.076 1.7E-06 49.4 7.3 74 83-156 205-292 (329)
22 KOG4359 Protein kinase C inhib 93.2 0.27 5.9E-06 41.3 6.1 75 83-158 52-136 (166)
23 PF04677 CwfJ_C_1: Protein sim 88.3 3.7 8E-05 33.1 8.2 98 56-166 9-112 (121)
24 KOG0562 Predicted hydrolase (H 87.1 0.95 2.1E-05 39.1 4.3 69 86-158 24-105 (184)
25 KOG2476 Uncharacterized conser 82.6 1.8 4E-05 42.7 4.5 47 55-107 316-362 (528)
26 KOG2720 Predicted hydrolase (H 52.2 20 0.00044 34.5 4.1 20 45-67 137-156 (431)
27 smart00750 KIND kinase non-cat 41.9 20 0.00044 28.5 2.2 31 199-229 18-48 (176)
28 PRK05471 CDP-diacylglycerol py 38.9 49 0.0011 30.3 4.4 65 94-159 69-147 (252)
29 PF02611 CDH: CDP-diacylglycer 38.1 70 0.0015 28.7 5.2 67 93-160 39-119 (222)
30 cd00608 GalT Galactose-1-phosp 35.7 1.6E+02 0.0035 27.3 7.5 25 134-158 137-162 (329)
31 COG1085 GalT Galactose-1-phosp 23.9 96 0.0021 29.6 3.8 29 131-159 135-164 (338)
32 TIGR00672 cdh CDP-diacylglycer 23.7 1.2E+02 0.0026 27.8 4.2 73 85-160 61-147 (250)
No 1
>PLN03103 GDP-L-galactose-hexose-1-phosphate guanyltransferase; Provisional
Probab=100.00 E-value=3.2e-86 Score=620.89 Aligned_cols=236 Identities=70% Similarity=1.122 Sum_probs=226.9
Q ss_pred hhhhcCcceeecCCeeEEEeccceeEEEEecCCCcccCCCceeecccccc-----------CCcceEEEEeeeCCCceee
Q 045630 5 ASILKYSQHYDITAYETKVISGQYGFIAQLNYPRHLKERPAEFRVEKVYQ-----------MGQEEVLFQFEASEDCEVQ 73 (240)
Q Consensus 5 ~~~~~g~FrY~l~~~~~kvlpG~~~FvaQLN~~R~~krRp~~f~~~~v~q-----------v~~~EvlF~f~~~~~~~~~ 73 (240)
.+|++|+|||||++|+||||||+|||+||||++|++||||++|++++++| |+++||||+|++++++++.
T Consensus 78 dr~~~GlFrY~l~~~~tkvlpG~~gFvaQLN~~R~~krR~~~f~i~~v~qpFd~~kFNF~KV~~~EvLf~~~~~~~~~~~ 157 (403)
T PLN03103 78 DRMARGLFRYDVTACETKVIPGKYGFIAQLNEGRHLKKRPTEFRVDKVLQPFDGKKFNFTKVGQEEVLFQFEQGEDDIPE 157 (403)
T ss_pred HHHhcCCcccccccceeEEecCccceEEEecccchhccCCCccchhhccCCCCCCcccCCCCCCceeEEEEecCCCcccc
Confidence 47899999999999999999999999999999999999999999999988 9999999999999999999
Q ss_pred eecCCCccCCCCCeEEEEeccCCCCCeEEEccccCcccccccChhHHHHHHHHHHccCCCceEEEecCCCCCCCcceeEE
Q 045630 74 FHLSAPFDVENSPSVVSINVSPIKYGHVLLIPRVLECLLQRIDCVSFLLALYTAAGAGNPHFRLGYNSLGAFATINHLHF 153 (240)
Q Consensus 74 ~~~~~~~~~~~~~~~vlIN~sPIe~~H~LlvP~~~~~lpQ~it~~~l~la~~~~~~~~~p~frvgyNSlGA~AsVNHLHF 153 (240)
+.+++|++.++++++|+||+|||+|||+||||++.+|+||+||.+++++|+++|++++||+|||||||+||+||||||||
T Consensus 158 ~~~~~~~~~~~s~~~VlINvsPI~~gH~LlvP~~~~~lPQ~i~~~~l~la~~~a~~~~~p~frvgYNSlGA~ASvNHLHF 237 (403)
T PLN03103 158 FFPSAPIDASNSPNVVAINVSPIEYGHVLLVPRVLDCLPQRIDPDSFLLALYMAAEANNPYFRVGYNSLGAFATINHLHF 237 (403)
T ss_pred cccCCccccCCCccEEEEeCCCCccCeEEEcCCcccCCCeEecHHHHHHHHHHHHhcCCCcEEEEecCCccccCcceeee
Confidence 99999997678999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeeecCCcccccccCCccee--eecCceEEEEecCCceeeEEEEeCCcHHHHHHHHHHHccccccCCCccEEEEEeCCEE
Q 045630 154 QASYMALPFPIQKAPTRKII--TSGGCVKISELFNYPVRGLVFEGGNSLQDLSNTVSDACVCLQENNIPYNVLIVDCGKR 231 (240)
Q Consensus 154 qa~y~~~~lpvE~a~~~~l~--~~~~g~~v~~l~dyP~~~~vf~~~~~~~~l~~~V~~~~~~L~~~niphNl~it~~g~r 231 (240)
||||++++||||++|++++. ...+|+++|+|.|||++||+|+++++++++++.|+++|++|+++|||||||+|++|+|
T Consensus 238 Qa~yl~~~lPvE~ap~~~l~~~~~~~g~~vy~L~~yP~~~lvf~~~~~~~~l~~~v~~~~~~L~~~niP~NL~i~~~g~r 317 (403)
T PLN03103 238 QAYYLANPFPVEKAPTVRIPHGTAKSGVKVSELVDYPVRGLVFEGGSDLEDLANSVADACICLQDNNIPYNLLISDCGKR 317 (403)
T ss_pred eecccCCCCccccCccccccccccCCCceEEEecCCCceEEEEEeCccHHHHHHHHHHHHHhhccCCcceEEEEEcCCeE
Confidence 99999999999999999983 3456789999999999999999877899999999999999999999999999999999
Q ss_pred EEEeeeccC
Q 045630 232 IFLFPQRYA 240 (240)
Q Consensus 232 vflfPR~~~ 240 (240)
|||||+|||
T Consensus 318 vflfP~Cy~ 326 (403)
T PLN03103 318 VFLFPQCYA 326 (403)
T ss_pred EEEeCchhh
Confidence 999999995
No 2
>KOG2720 consensus Predicted hydrolase (HIT family) [General function prediction only]
Probab=100.00 E-value=5.3e-75 Score=531.54 Aligned_cols=231 Identities=54% Similarity=0.854 Sum_probs=210.3
Q ss_pred hhhcCcceeecCCeeEEEeccceeEEEEecCCC-cccCCCceeeccccccCCcceEEEEeeeCCCceeeeecC-----CC
Q 045630 6 SILKYSQHYDITAYETKVISGQYGFIAQLNYPR-HLKERPAEFRVEKVYQMGQEEVLFQFEASEDCEVQFHLS-----AP 79 (240)
Q Consensus 6 ~~~~g~FrY~l~~~~~kvlpG~~~FvaQLN~~R-~~krRp~~f~~~~v~qv~~~EvlF~f~~~~~~~~~~~~~-----~~ 79 (240)
+-+.|+|||||++|+||+|||+|||+||||++| ++|||||+|++ ++| +++...|+|+|.+..|..|.-+ +|
T Consensus 85 ~~q~glF~Y~l~~c~tr~ipGkygf~aqLN~~R~~lrrrP~~f~~--v~~-~F~h~~FNF~Kv~~~Ellf~~k~~~~~m~ 161 (431)
T KOG2720|consen 85 RFQRGLFRYDLTACETRVIPGKYGFYAQLNEGRNHLRRRPTEFRV--VLQ-PFDHMKFNFTKVGQEELLFQFKAATDPMP 161 (431)
T ss_pred HHhhccccccccccceeccCcccceeeeeccccchhhcCCchhhh--ccc-ccccceecccccccceEEEEEecCCCCCC
Confidence 446799999999999999999999999999999 68888999974 555 6666666666666666666533 35
Q ss_pred ccCCCCCeEEEEeccCCCCCeEEEccccCcccccccChhHHHHHHHHHHccCCCceEEEecCCCCCCCcceeEEeeeecC
Q 045630 80 FDVENSPSVVSINVSPIKYGHVLLIPRVLECLLQRIDCVSFLLALYTAAGAGNPHFRLGYNSLGAFATINHLHFQASYMA 159 (240)
Q Consensus 80 ~~~~~~~~~vlIN~sPIe~~H~LlvP~~~~~lpQ~it~~~l~la~~~~~~~~~p~frvgyNSlGA~AsVNHLHFqa~y~~ 159 (240)
.+.++++ +|+||+|||||||+|+||++.+|+||+||.++|++|++||++++||+||+|||||||+||||||||||||++
T Consensus 162 ~dpe~~~-vvaIN~sPie~~H~LiiP~V~kc~pQrit~~al~lav~~m~~~dd~~frlgyNSlga~AsVNHLHfha~y~p 240 (431)
T KOG2720|consen 162 GDPENSP-VVAINVSPIEYGHVLIIPRVLKCLPQRITHKALLLAVTMMAEADDPYFRLGYNSLGAFASVNHLHFHAYYLP 240 (431)
T ss_pred CCcccCc-eEEEecCccccCcEEEecchhccCcceeeHHHHHHHHHHHHhcCCchhheecccchhhhhhhhhhhhhhhcc
Confidence 5555666 899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcccccccCCcceeeecCceEEE-EecCCceeeEEEEeCCcHHHHHHHHHHHccccccCCCccEEEEEeCCEEEEEeeec
Q 045630 160 LPFPIQKAPTRKIITSGGCVKIS-ELFNYPVRGLVFEGGNSLQDLSNTVSDACVCLQENNIPYNVLIVDCGKRIFLFPQR 238 (240)
Q Consensus 160 ~~lpvE~a~~~~l~~~~~g~~v~-~l~dyP~~~~vf~~~~~~~~l~~~V~~~~~~L~~~niphNl~it~~g~rvflfPR~ 238 (240)
.++|||++++++|.+...|+.+. .+..||+..+.++++++.+++++.||+++.||+++|||||||++++|.|+++-|||
T Consensus 241 ~d~~i~~~p~~~l~~~vn~~~ir~p~~~~pv~~~~~ds~~~~~e~~d~vy~c~~~l~~nN~phNlfls~~grR~g~~pqc 320 (431)
T KOG2720|consen 241 MDFPIEKAPLDKLTTTVNGVKIRAPLLGYPVRFLLNDSGEQVAELVDTVYDCAVCLQNNNIPHNLFLSDQGRRIGLSPQC 320 (431)
T ss_pred ccCccccCcchhhccccceEEecccccccceEEEEeccchHHHHHHHHHHHHHHHHhhCCCCceEEeeccCccccCCCce
Confidence 99999999999998888888888 68899999999999999999999999999999999999999999999999999999
Q ss_pred cC
Q 045630 239 YA 240 (240)
Q Consensus 239 ~~ 240 (240)
|+
T Consensus 321 yv 322 (431)
T KOG2720|consen 321 YV 322 (431)
T ss_pred EE
Confidence 96
No 3
>cd01278 aprataxin_related aprataxin related: Aprataxin, a HINT family hydrolase is mutated in ataxia oculomotor apraxia syndrome. All the members of this subgroup have the conserved HxHxHxx (where x is a hydrophobic residue) signature motif. Members of this subgroup are predominantly eukaryotic in origin.
Probab=98.40 E-value=1.3e-06 Score=67.32 Aligned_cols=72 Identities=21% Similarity=0.339 Sum_probs=50.6
Q ss_pred CCCeEEEEeccCCCCCeEEEccccCcccccccCh-------hHHHHHHHHHHc---cCCCceEEEecCCCCCCCcceeEE
Q 045630 84 NSPSVVSINVSPIKYGHVLLIPRVLECLLQRIDC-------VSFLLALYTAAG---AGNPHFRLGYNSLGAFATINHLHF 153 (240)
Q Consensus 84 ~~~~~vlIN~sPIe~~H~LlvP~~~~~lpQ~it~-------~~l~la~~~~~~---~~~p~frvgyNSlGA~AsVNHLHF 153 (240)
++..+++.+.+|..+||++++|...-.-.--++. +.+..+.+.... ...++|++|+|+ |...||+|||+
T Consensus 22 ~~~~~a~~~~~p~~~~h~lIiPk~h~~~~~~l~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~n~g~h~-~p~~~v~H~H~ 100 (104)
T cd01278 22 DDRVVVFKDIYPKARHHYLVIPKEHIASLKALTKEDVPLLEHMETVGREKLLRSDNTDPSEFRFGFHA-PPFTSVSHLHL 100 (104)
T ss_pred CCCEEEEECCCCCCCceEEEEecCCCCChHHCCHhHHHHHHHHHHHHHHHHHHHcCCCccCeEEEeCC-CCCcCeeeEEE
Confidence 5667888999999999999999875433333343 333444442222 356689999997 44479999999
Q ss_pred eee
Q 045630 154 QAS 156 (240)
Q Consensus 154 qa~ 156 (240)
|..
T Consensus 101 Hvi 103 (104)
T cd01278 101 HVI 103 (104)
T ss_pred Eee
Confidence 975
No 4
>PRK10687 purine nucleoside phosphoramidase; Provisional
Probab=98.26 E-value=3.5e-06 Score=67.80 Aligned_cols=74 Identities=19% Similarity=0.254 Sum_probs=53.6
Q ss_pred CCCCeEEEEeccCCCCCeEEEccccCcccccccChh-------HHHHHHHHHHc--cCCCceEEEecCC-CCCCCcceeE
Q 045630 83 ENSPSVVSINVSPIKYGHVLLIPRVLECLLQRIDCV-------SFLLALYTAAG--AGNPHFRLGYNSL-GAFATINHLH 152 (240)
Q Consensus 83 ~~~~~~vlIN~sPIe~~H~LlvP~~~~~lpQ~it~~-------~l~la~~~~~~--~~~p~frvgyNSl-GA~AsVNHLH 152 (240)
+++...++.+.+|+.+||+|+||...-.-..-++.+ .+..+.+.++. .+..+|++++|.. .|.-+|-|+|
T Consensus 22 edd~~~aflD~~P~~~GH~LViPK~H~~~l~dl~~~~~~~l~~l~~~~~~~~~~~~~~~~g~~l~~n~G~~agQ~V~HlH 101 (119)
T PRK10687 22 QDELVTAFRDISPQAPTHILIIPNILIPTVNDVSAEHEQALGRMITVAAKIAEQEGIAEDGYRLIMNTNRHGGQEVYHIH 101 (119)
T ss_pred ECCCEEEEEcCCCCCCccEEEEehhHhCChhHCChHHHHHHHHHHHHHHHHHHHhCCCCCceEEEEeCCCcCCcccCEEE
Confidence 356678999999999999999999765444455544 23334444432 2456899999964 6778899999
Q ss_pred Eeee
Q 045630 153 FQAS 156 (240)
Q Consensus 153 Fqa~ 156 (240)
+|..
T Consensus 102 iHvI 105 (119)
T PRK10687 102 MHLL 105 (119)
T ss_pred EEEC
Confidence 9987
No 5
>cd00468 HIT_like HIT family: HIT (Histidine triad) proteins, named for a motif related to the sequence HxHxH/Qxx (x, a hydrophobic amino acid), are a superfamily of nucleotide hydrolases and transferases, which act on the alpha-phosphate of ribonucleotides. On the basis of sequence, substrate specificity, structure, evolution and mechanism, HIT proteins are classified in the literacture into three major branches: the Hint branch, which consists of adenosine 5' -monophosphoramide hydrolases, the Fhit branch, that consists of diadenosine polyphosphate hydrolases, and the GalT branch consisting of specific nucloside monophosphate transferases. Further sequence analysis reveals several new closely related, yet uncharacterized subgroups.
Probab=98.22 E-value=6.5e-06 Score=60.59 Aligned_cols=73 Identities=25% Similarity=0.296 Sum_probs=50.6
Q ss_pred CCCeEEEEeccCCCCCeEEEccccCcccccccC----hhHHHHHHHHHHc----cCCCceEEEecCC-CCCCCcceeEEe
Q 045630 84 NSPSVVSINVSPIKYGHVLLIPRVLECLLQRID----CVSFLLALYTAAG----AGNPHFRLGYNSL-GAFATINHLHFQ 154 (240)
Q Consensus 84 ~~~~~vlIN~sPIe~~H~LlvP~~~~~lpQ~it----~~~l~la~~~~~~----~~~p~frvgyNSl-GA~AsVNHLHFq 154 (240)
++...++.|.+|..+||+++||.....-.--++ .+...++.++++. ...+++.+++|.. -|..||.|+|+|
T Consensus 4 ~~~~~a~~~~~p~~~gh~lIipk~H~~~~~~l~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~n~g~~~g~~v~H~H~h 83 (86)
T cd00468 4 DEHSFAFVNLKPAAPGHVLVCPKRHVETLPDLDEALLADLVITAQRVAAELEKHGNVPSLTVFVNDGAAAGQSVPHVHLH 83 (86)
T ss_pred cCcEEEEECCCCCCCCcEEEeCchhhCChhHCCHHHHHHHHHHHHHHHHHHHHhcCCCceEEEEcCCccCCCcCCEEEEE
Confidence 566789999999999999999954432223334 3344444444443 3456899999875 355699999999
Q ss_pred ee
Q 045630 155 AS 156 (240)
Q Consensus 155 a~ 156 (240)
..
T Consensus 84 ii 85 (86)
T cd00468 84 VL 85 (86)
T ss_pred eC
Confidence 75
No 6
>cd01276 PKCI_related Protein Kinase C Interacting protein related (PKCI): PKCI and related proteins belong to the ubiquitous HIT family of hydrolases that act on alpha-phosphates of ribonucleotides. The members of this subgroup have a conserved HxHxHxx motif (x is a hydrophobic residue) that is a signature for this family. No enzymatic activity has been reported however, for PKCI and its related members.
Probab=98.18 E-value=8.6e-06 Score=62.56 Aligned_cols=73 Identities=21% Similarity=0.211 Sum_probs=52.9
Q ss_pred CCCeEEEEeccCCCCCeEEEccccCcccccccC-------hhHHHHHHHHHHccC--CCceEEEecCC-CCCCCcceeEE
Q 045630 84 NSPSVVSINVSPIKYGHVLLIPRVLECLLQRID-------CVSFLLALYTAAGAG--NPHFRLGYNSL-GAFATINHLHF 153 (240)
Q Consensus 84 ~~~~~vlIN~sPIe~~H~LlvP~~~~~lpQ~it-------~~~l~la~~~~~~~~--~p~frvgyNSl-GA~AsVNHLHF 153 (240)
++..+++.+.+|..+||++++|.....----++ .+++..+..+++... .++|.+++|.. -|..||.|+|+
T Consensus 20 ~~~~~a~~~~~p~~~gh~lIiPk~H~~~~~dl~~~~~~~l~~~~~~~~~~~~~~~~~~~~~n~~~~~g~~~g~~v~H~Hi 99 (104)
T cd01276 20 DDEVLAFHDINPQAPVHILVIPKKHIASLSDATEEDEELLGHLLSAAAKVAKDLGIAEDGYRLVINCGKDGGQEVFHLHL 99 (104)
T ss_pred CCCEEEEECCCCCCCCEEEEEecceeCChHHcccccHHHHHHHHHHHHHHHHHhCCCCCCEEEEEeCCCCCCCceeEEEE
Confidence 566789999999999999999987542222222 445555555666655 56899998754 56679999999
Q ss_pred eee
Q 045630 154 QAS 156 (240)
Q Consensus 154 qa~ 156 (240)
|..
T Consensus 100 Hii 102 (104)
T cd01276 100 HLL 102 (104)
T ss_pred EEe
Confidence 975
No 7
>COG0537 Hit Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases [Nucleotide transport and metabolism / Carbohydrate transport and metabolism / General function prediction only]
Probab=98.04 E-value=2.9e-05 Score=63.93 Aligned_cols=74 Identities=28% Similarity=0.389 Sum_probs=49.7
Q ss_pred CCCCeEEEEeccCCCCCeEEEccccCcccccccCh----hHHHHHHHHHHc----cCCCceEEEecCC-CCCCCcceeEE
Q 045630 83 ENSPSVVSINVSPIKYGHVLLIPRVLECLLQRIDC----VSFLLALYTAAG----AGNPHFRLGYNSL-GAFATINHLHF 153 (240)
Q Consensus 83 ~~~~~~vlIN~sPIe~~H~LlvP~~~~~lpQ~it~----~~l~la~~~~~~----~~~p~frvgyNSl-GA~AsVNHLHF 153 (240)
+++...++.|.+|..+||+|+||...-.-=.-+++ +.+..+-.+++. .+-++|+++-|.- .|.-+|.|+||
T Consensus 20 e~~~~~afld~~P~~~gH~LviPk~h~~~l~~l~~~~~~~l~~~~~~ia~al~~~~~~~g~ni~~N~g~~agq~V~HlH~ 99 (138)
T COG0537 20 EDEHVLAFLDIYPAAPGHTLVIPKRHVSDLEDLDPEELAELFLLAQKIAKALKEAFGADGYNIGINNGKAAGQEVFHLHI 99 (138)
T ss_pred eCCCEEEEecCCCCCCCeEEEEeccchhhhhhCCHHHHHHHHHHHHHHHHHHHHHhCCCceEEEEecCcccCcCcceEEE
Confidence 35667899999999999999999943322223333 344443333332 2345899998854 33368999999
Q ss_pred eee
Q 045630 154 QAS 156 (240)
Q Consensus 154 qa~ 156 (240)
|..
T Consensus 100 HvI 102 (138)
T COG0537 100 HII 102 (138)
T ss_pred EEc
Confidence 998
No 8
>PF01230 HIT: HIT domain; InterPro: IPR001310 The Histidine Triad (HIT) motif, His-x-His-x-His-x-x (x, a hydrophobic amino acid) was identified as being highly conserved in a variety of organisms []. Crystal structure of rabbit Hint, purified as an adenosine and AMP-binding protein, showed that proteins in the HIT superfamily are conserved as nucleotide-binding proteins and that Hint homologues, which are found in all forms of life, are structurally related to Fhit homologues and GalT-related enzymes, which have more restricted phylogenetic profiles []. Hint homologues including rabbit Hint and yeast Hnt1 hydrolyse adenosine 5' monophosphoramide substrates such as AMP-NH2 and AMP-lysine to AMP plus the amine product and function as positive regulators of Cdk7/Kin28 in vivo []. Fhit homologues are diadenosine polyphosphate hydrolases [] and function as tumour suppressors in human and mouse [] though the tumour suppressing function of Fhit does not depend on ApppA hydrolysis []. The third branch of the HIT superfamily, which includes GalT homologues, contains a related His-X-His-X-Gln motif and transfers nucleoside monophosphate moieties to phosphorylated second substrates rather than hydrolysing them [].; PDB: 3LB5_B 1EMS_A 1Y23_A 3ANO_B 1KPE_B 1KPC_A 4EQE_B 1KPA_A 1KPB_B 4EQG_B ....
Probab=98.01 E-value=1.9e-05 Score=60.33 Aligned_cols=73 Identities=25% Similarity=0.303 Sum_probs=47.4
Q ss_pred CCCeEEEEeccCCCCCeEEEccccCcccccccChh----HHHHHHHHHH----ccCCCceEEEecCC-CCCCCcceeEEe
Q 045630 84 NSPSVVSINVSPIKYGHVLLIPRVLECLLQRIDCV----SFLLALYTAA----GAGNPHFRLGYNSL-GAFATINHLHFQ 154 (240)
Q Consensus 84 ~~~~~vlIN~sPIe~~H~LlvP~~~~~lpQ~it~~----~l~la~~~~~----~~~~p~frvgyNSl-GA~AsVNHLHFq 154 (240)
++...++.+..|..+||+|++|...-.--.-++.+ .+.++..+++ ..+..+++++.|.. -|..+|.|+|||
T Consensus 12 ~~~~~~~~~~~p~~~gh~LVipk~H~~~l~dl~~~~~~~l~~~~~~v~~~l~~~~~~~~~~~~~~~g~~~gq~v~HlH~H 91 (98)
T PF01230_consen 12 DDHFVAFLDIFPISPGHLLVIPKRHVESLSDLPPEERAELMQLVQKVAKALKEAFGPDGYNVIINNGPAAGQSVPHLHFH 91 (98)
T ss_dssp -SSEEEEEESSTSSTTEEEEEESSTGSSGGGSHHHHHHHHHHHHHHHHHHHHHHHTTSEEEEEEEESGGGTSSSSS-EEE
T ss_pred CCCEEEEEcCCCCCCeEEEEEecccccchhcCCHHHHHHHHHHHHHHHHHHhcccccceeeccccchhhhcCccCEEEEE
Confidence 45678999999999999999998843222233322 2222222222 22456899999765 467789999999
Q ss_pred ee
Q 045630 155 AS 156 (240)
Q Consensus 155 a~ 156 (240)
..
T Consensus 92 vi 93 (98)
T PF01230_consen 92 VI 93 (98)
T ss_dssp EE
T ss_pred Ee
Confidence 76
No 9
>cd01275 FHIT FHIT (fragile histidine family): FHIT proteins, related to the HIT family carry a motif HxHxH/Qxx (x, is a hydrophobic amino acid), On the basis of sequence, substrate specificity, structure, evolution and mechanism, HIT proteins are classified into three branches: the Hint branch, which consists of adenosine 5' -monophosphoramide hydrolases, the Fhit branch, that consists of diadenosine polyphosphate hydrolases, and the GalT branch consisting of specific nucloside monophosphate transferases. Fhit plays a very important role in the development of tumours. Infact, Fhit deletions are among the earliest and most frequent genetic alterations in the development of tumours.
Probab=97.78 E-value=0.00014 Score=58.06 Aligned_cols=73 Identities=19% Similarity=0.215 Sum_probs=49.5
Q ss_pred CCCeEEEEeccCCCCCeEEEccccCcccccccChhHHHHHHHHH-------Hc-cCCCceEEEecCC-CCCCCcceeEEe
Q 045630 84 NSPSVVSINVSPIKYGHVLLIPRVLECLLQRIDCVSFLLALYTA-------AG-AGNPHFRLGYNSL-GAFATINHLHFQ 154 (240)
Q Consensus 84 ~~~~~vlIN~sPIe~~H~LlvP~~~~~lpQ~it~~~l~la~~~~-------~~-~~~p~frvgyNSl-GA~AsVNHLHFq 154 (240)
++...++.+..|..+||++++|.....--.-++++-.....+++ .. ....+|.+++|+. .+.-+|-|+|+|
T Consensus 20 ~~~~~~~~~~~p~~~gh~lIiPk~H~~~~~~L~~~e~~~l~~~~~~v~~~l~~~~~~~~~n~~~~~g~~~gq~v~H~HiH 99 (126)
T cd01275 20 TKHSFAVVNLYPYNPGHVLVVPYRHVPRLEDLTPEEIADLFKLVQLAMKALKVVYKPDGFNIGINDGKAGGGIVPHVHIH 99 (126)
T ss_pred CCCEEEEEcCCCCCCCcEEEEeccccCChhhCCHHHHHHHHHHHHHHHHHHHHhcCCCceEEEEeCCcccCCCcCEEEEE
Confidence 56678999999999999999998754334444533222222221 11 2345889988765 555688999999
Q ss_pred ee
Q 045630 155 AS 156 (240)
Q Consensus 155 a~ 156 (240)
..
T Consensus 100 ii 101 (126)
T cd01275 100 IV 101 (126)
T ss_pred Ee
Confidence 98
No 10
>PF11969 DcpS_C: Scavenger mRNA decapping enzyme C-term binding; PDB: 1VLR_B 1XMM_D 1XML_B 1ST0_A 3BLA_B 3BL9_B 3BL7_B 1ST4_B 1XQU_B.
Probab=97.59 E-value=0.00026 Score=56.45 Aligned_cols=74 Identities=20% Similarity=0.207 Sum_probs=47.9
Q ss_pred CCCeEEEEeccCCCCCeEEEccccC-cccccccCh-------hHHHHHHHHHHcc-----CCCceEEEecCCCCCCCcce
Q 045630 84 NSPSVVSINVSPIKYGHVLLIPRVL-ECLLQRIDC-------VSFLLALYTAAGA-----GNPHFRLGYNSLGAFATINH 150 (240)
Q Consensus 84 ~~~~~vlIN~sPIe~~H~LlvP~~~-~~lpQ~it~-------~~l~la~~~~~~~-----~~p~frvgyNSlGA~AsVNH 150 (240)
++..+++-+.+|-...|+|+||... -.-..-|+. ++...|.+++.+. ....+++||..+= |++|
T Consensus 20 d~~~v~~~D~~P~a~~H~LviPk~~~i~sl~~L~~~~~~lL~~m~~~~~~~~~~~~~~~~~~~~~~~gfH~~P---S~~H 96 (116)
T PF11969_consen 20 DDDFVVFKDIYPKAPVHLLVIPKDPHIRSLRDLTPEHLPLLERMREVARELLKEEYPGDLDSDDIRLGFHYPP---SVYH 96 (116)
T ss_dssp ETSEEEEE-TT-SCCEEEEEEESSSS-SSGGG--GGGHHHHHHHHHHHHHHHHHHH-TT-EGGGEEEEEESS----SSSS
T ss_pred eCCEEEeeCCCCCcCcEEEEEeecCCCCChHHcCHHHHHHHHHHHHHHHHHHHHhcccccchhhhcccccCCC---Ccce
Confidence 4668899999999999999999983 222334443 3444444444432 2458999999876 9999
Q ss_pred eEEeeeecCC
Q 045630 151 LHFQASYMAL 160 (240)
Q Consensus 151 LHFqa~y~~~ 160 (240)
||+|..-.+.
T Consensus 97 LHlHvi~~~~ 106 (116)
T PF11969_consen 97 LHLHVISPDF 106 (116)
T ss_dssp -EEEEEETTS
T ss_pred EEEEEccCCC
Confidence 9999985433
No 11
>COG4360 APA2 ATP adenylyltransferase (5',5'''-P-1,P-4-tetraphosphate phosphorylase II) [Nucleotide transport and metabolism]
Probab=97.58 E-value=0.00022 Score=64.35 Aligned_cols=72 Identities=25% Similarity=0.240 Sum_probs=59.8
Q ss_pred CCCeEEEEeccCCCCCeEEEccccCcccccccChhHHHHHHHHHHccCCCceEEEecCC-CCCCCcceeEEeeeec
Q 045630 84 NSPSVVSINVSPIKYGHVLLIPRVLECLLQRIDCVSFLLALYTAAGAGNPHFRLGYNSL-GAFATINHLHFQASYM 158 (240)
Q Consensus 84 ~~~~~vlIN~sPIe~~H~LlvP~~~~~lpQ~it~~~l~la~~~~~~~~~p~frvgyNSl-GA~AsVNHLHFqa~y~ 158 (240)
++.+..+.|++|+-..|.|+|-+-..-.--.+|...+..|.......+. -|||||- -|.||-+|=|+|..-+
T Consensus 91 s~th~~llNKF~VVdeHlLiVTrefedQ~s~LTl~Df~ta~~vL~~ldg---lvFYNsGp~aGaSq~HkHLQi~pm 163 (298)
T COG4360 91 SDTHKLLLNKFPVVDEHLLIVTREFEDQESALTLADFTTAYAVLCGLDG---LVFYNSGPIAGASQDHKHLQIVPM 163 (298)
T ss_pred chhHhhhhhcCCcccceeEEeehhhhhccccCCHHHHHHHHHHHhcccc---eEEecCCCCcCcCCCccceeEeec
Confidence 3457899999999999999998877766777898888888877666663 6999997 7888999999999844
No 12
>cd01277 HINT_subgroup HINT (histidine triad nucleotide-binding protein) subgroup: Members of this CD belong to the superfamily of histidine triad hydrolases that act on alpha-phosphate of ribonucleotides. This subgroup includes members from all three forms of cellular life. Although the biochemical function has not been characterised for many of the members of this subgroup, the proteins from Yeast have been shown to be involved in secretion, peroxisome formation and gene expression.
Probab=97.57 E-value=0.00047 Score=52.46 Aligned_cols=73 Identities=18% Similarity=0.181 Sum_probs=48.6
Q ss_pred CCCeEEEEeccCCCCCeEEEccccCcccccccChhHHHHH----HHHH----HccCCCceEEEecCC-CCCCCcceeEEe
Q 045630 84 NSPSVVSINVSPIKYGHVLLIPRVLECLLQRIDCVSFLLA----LYTA----AGAGNPHFRLGYNSL-GAFATINHLHFQ 154 (240)
Q Consensus 84 ~~~~~vlIN~sPIe~~H~LlvP~~~~~lpQ~it~~~l~la----~~~~----~~~~~p~frvgyNSl-GA~AsVNHLHFq 154 (240)
++...++++..|..+||++++|...-.-.--++.+..... -+++ +....++|.+++|+. -+..++.|+|+|
T Consensus 20 ~~~~~a~~~~~~~~pg~~lI~Pk~H~~~~~~l~~~e~~~l~~~~~~v~~~l~~~~~~~~~n~~~~~~~~~g~~~~H~HiH 99 (103)
T cd01277 20 DDHVLAFLDINPASKGHTLVIPKKHYENLLDLDPEELAELILAAKKVARALKKALKADGLNILQNNGRAAGQVVFHVHVH 99 (103)
T ss_pred CCCEEEEECCCCCCCeeEEEEeccccCChhhCCHHHHHHHHHHHHHHHHHHHHhcCCCceEEEEeCCcccCcccCEEEEE
Confidence 5667899999999999999999866533334453322211 1221 123456889988864 334688999999
Q ss_pred ee
Q 045630 155 AS 156 (240)
Q Consensus 155 a~ 156 (240)
.+
T Consensus 100 ii 101 (103)
T cd01277 100 VI 101 (103)
T ss_pred Ec
Confidence 86
No 13
>KOG3275 consensus Zinc-binding protein of the histidine triad (HIT) family [Signal transduction mechanisms]
Probab=97.40 E-value=0.00054 Score=55.53 Aligned_cols=73 Identities=19% Similarity=0.260 Sum_probs=50.0
Q ss_pred CCCeEEEEeccCCCCCeEEEccccC-------cccccccChhHHHHHHHHHHccC-CCceEEEecCC-CCCCCcceeEEe
Q 045630 84 NSPSVVSINVSPIKYGHVLLIPRVL-------ECLLQRIDCVSFLLALYTAAGAG-NPHFRLGYNSL-GAFATINHLHFQ 154 (240)
Q Consensus 84 ~~~~~vlIN~sPIe~~H~LlvP~~~-------~~lpQ~it~~~l~la~~~~~~~~-~p~frvgyNSl-GA~AsVNHLHFq 154 (240)
++..+...-++|-.++|+|+||... +..++-+..+.+..+-..|+... +.+|||-=|-- -|.-||.|+|||
T Consensus 36 dd~~lAF~Di~Pqap~HfLvIPK~hi~~~s~aed~~~e~Lg~ll~~~k~vak~~Gl~~gYrvv~NnG~~g~QsV~HvH~H 115 (127)
T KOG3275|consen 36 DDRCLAFHDIAPQAPGHFLVIPKKHITQLSKAEDRDDELLGHLLPVAKKVAKALGLEDGYRVVQNNGKDGHQSVYHVHLH 115 (127)
T ss_pred ccceEEEEecCCCCCceEEEeecccccchhhcccCCHHHHHHHHHHHHHHHHHhCcccceeEEEcCCcccceEEEEEEEE
Confidence 5667899999999999999999876 11222222334455555555544 33577776654 566799999999
Q ss_pred ee
Q 045630 155 AS 156 (240)
Q Consensus 155 a~ 156 (240)
..
T Consensus 116 vl 117 (127)
T KOG3275|consen 116 VL 117 (127)
T ss_pred Ee
Confidence 76
No 14
>PRK05270 galactose-1-phosphate uridylyltransferase; Provisional
Probab=96.95 E-value=0.004 Score=60.94 Aligned_cols=123 Identities=24% Similarity=0.334 Sum_probs=91.7
Q ss_pred cCCCC--CeEEEccccCcccccccChhHHHHHHHHHHccCCCceEEEecCC----CCCCCcceeEEeeeecCCccccccc
Q 045630 94 SPIKY--GHVLLIPRVLECLLQRIDCVSFLLALYTAAGAGNPHFRLGYNSL----GAFATINHLHFQASYMALPFPIQKA 167 (240)
Q Consensus 94 sPIe~--~H~LlvP~~~~~lpQ~it~~~l~la~~~~~~~~~p~frvgyNSl----GA~AsVNHLHFqa~y~~~~lpvE~a 167 (240)
||-.| -||. |=.-.| .|..|++..|.-.++|....- ++-+|=|.= |||-= .|=|||++ .+.||+++|
T Consensus 212 SPY~YynEH~I-vl~~~H-~PMkI~~~tF~rLL~fv~~fP--hYFiGSNADLPIVGGSIL-sHdHyQgG--~h~FpM~kA 284 (493)
T PRK05270 212 SPYAYFNEHCI-VLSEKH-RPMKISRKTFERLLDFVEQFP--HYFIGSNADLPIVGGSIL-SHDHYQGG--RHTFPMAKA 284 (493)
T ss_pred CchheecceeE-EecCcc-CccEecHHHHHHHHHHHHhCC--ccccccCCCCCccccccc-ccccccCC--CcccccccC
Confidence 55554 5866 556666 899999999999999998765 688999964 55443 69999999 789999999
Q ss_pred CCccee--eecCceEEEEecCCceeeEEEEeCC--cHHHHHHHHHHH--------cccc-ccCCCccEEE
Q 045630 168 PTRKII--TSGGCVKISELFNYPVRGLVFEGGN--SLQDLSNTVSDA--------CVCL-QENNIPYNVL 224 (240)
Q Consensus 168 ~~~~l~--~~~~g~~v~~l~dyP~~~~vf~~~~--~~~~l~~~V~~~--------~~~L-~~~niphNl~ 224 (240)
+...-. ...+++.. .+++||+..+.+.+.+ .+.++++.|.+. ++.+ +..++|||-.
T Consensus 285 ~i~~~f~~~~~p~V~a-givkWPmSviRL~~~~~~~l~~~a~~Il~~Wr~YsDe~~~I~a~tdg~pHnTI 353 (493)
T PRK05270 285 PIEEEFTLAGYPDVKA-GIVKWPMSVIRLTSKNKDELIDAADKILEAWRGYSDESVDILAYTDGTPHNTI 353 (493)
T ss_pred ccceEEecCCCCcceE-EEeeCcceEEEeecCCHHHHHHHHHHHHHHHhCCCccccceeecCCCCcccCC
Confidence 986632 12445433 4789999999999886 667777777765 2222 4677999974
No 15
>TIGR01239 galT_2 galactose-1-phosphate uridylyltransferase, family 2. This enzyme is involved in glucose and galactose interconversion. This model describes one of two extremely distantly related branches of the model pfam01087 from PFAM.
Probab=96.92 E-value=0.0042 Score=60.72 Aligned_cols=123 Identities=19% Similarity=0.283 Sum_probs=91.0
Q ss_pred cCCCC--CeEEEccccCcccccccChhHHHHHHHHHHccCCCceEEEecCC----CCCCCcceeEEeeeecCCccccccc
Q 045630 94 SPIKY--GHVLLIPRVLECLLQRIDCVSFLLALYTAAGAGNPHFRLGYNSL----GAFATINHLHFQASYMALPFPIQKA 167 (240)
Q Consensus 94 sPIe~--~H~LlvP~~~~~lpQ~it~~~l~la~~~~~~~~~p~frvgyNSl----GA~AsVNHLHFqa~y~~~~lpvE~a 167 (240)
||-.| -||. |=.-.| .|..|++..|.-.++|....- ++-+|=|.= |||== .|=|||++ .+.||+++|
T Consensus 209 SPY~YynEHcI-vl~~~H-~PMkI~~~tF~~Ll~fv~~fP--hYFiGSNADLPIVGGSIL-sHdHyQgG--~h~FpM~kA 281 (489)
T TIGR01239 209 SPYAYFPEHSI-VLKGKH-EPMEISKKTFERLLSFLGKFP--HYFIGSNADLPIVGGSIL-SHDHYQGG--RHDFPMARA 281 (489)
T ss_pred cchheecceeE-EecCcc-CCcEecHHHHHHHHHHHHhCC--ccccccCCCCCccccccc-ccccccCC--CcccccccC
Confidence 55554 5766 556666 899999999999999988765 688999964 66432 69999999 789999999
Q ss_pred CCcceee--ecCceEEEEecCCceeeEEEEeCC--cHHHHHHHHHHHc--------ccc-ccCCCccEEE
Q 045630 168 PTRKIIT--SGGCVKISELFNYPVRGLVFEGGN--SLQDLSNTVSDAC--------VCL-QENNIPYNVL 224 (240)
Q Consensus 168 ~~~~l~~--~~~g~~v~~l~dyP~~~~vf~~~~--~~~~l~~~V~~~~--------~~L-~~~niphNl~ 224 (240)
+...-.. ..+++.. .+++||+..+.+.+.+ .+.++++.|.+.- +.+ +..++|||-.
T Consensus 282 ~i~~~f~~~~~p~V~a-givkWPmSviRL~~~~~~~l~~~a~~Il~~Wr~YsDe~~~I~A~t~g~pHnTI 350 (489)
T TIGR01239 282 EAEEVYELNDYPDVSA-GIVKWPMSVLRLQGEDPGELAEAADHIFRTWQTYSDEKAGIAAYSDGTPHHTV 350 (489)
T ss_pred CcceEEecCCCCcceE-EEEeccceEEEeccCCHHHHHHHHHHHHHHHhCCCccccceEecCCCCccccC
Confidence 9876322 2344433 3679999999999886 5667777777652 222 4677999974
No 16
>PRK11720 galactose-1-phosphate uridylyltransferase; Provisional
Probab=96.41 E-value=0.01 Score=56.00 Aligned_cols=74 Identities=12% Similarity=-0.010 Sum_probs=48.9
Q ss_pred CCCCeEEEEeccCCCCCeEEEccccCcccccccChhHHHHHH----HHHH----cc-CCCceEEEecCC---CCCCCcce
Q 045630 83 ENSPSVVSINVSPIKYGHVLLIPRVLECLLQRIDCVSFLLAL----YTAA----GA-GNPHFRLGYNSL---GAFATINH 150 (240)
Q Consensus 83 ~~~~~~vlIN~sPIe~~H~LlvP~~~~~lpQ~it~~~l~la~----~~~~----~~-~~p~frvgyNSl---GA~AsVNH 150 (240)
+++..++++..+|..+||++++|.....--.-|+.+.+.... ++++ .. .++.|-+|+|+. |+..++-|
T Consensus 215 End~fvAf~p~~p~~P~h~lIiPKrH~~~~~dl~dee~~~La~~lk~v~~~l~~~~~~~~pyn~~~h~~p~~~~~~~~~H 294 (346)
T PRK11720 215 ETEHWLAVVPYWAAWPFETLLLPKAHVLRLTDLTDAQRDDLALALKKLTSRYDNLFQCSFPYSMGWHGAPFNGEENDHWQ 294 (346)
T ss_pred ECCCEEEEeccccCCCCeEEEecccCCCChhhCCHHHHHHHHHHHHHHHHHHHHHhCCCCCCceeEEecccCCCCCeeEE
Confidence 467788999999999999999998765333445543332222 2222 22 354688887776 44456778
Q ss_pred eEEeee
Q 045630 151 LHFQAS 156 (240)
Q Consensus 151 LHFqa~ 156 (240)
+|+|.+
T Consensus 295 ~Hihii 300 (346)
T PRK11720 295 LHAHFY 300 (346)
T ss_pred EEEEEe
Confidence 888886
No 17
>COG4468 GalT Galactose-1-phosphate uridyltransferase [Carbohydrate transport and metabolism]
Probab=96.24 E-value=0.013 Score=56.49 Aligned_cols=123 Identities=24% Similarity=0.321 Sum_probs=90.6
Q ss_pred cCCCC--CeEEEccccCcccccccChhHHHHHHHHHHccCCCceEEEecCC----CCCCCcceeEEeeeecCCccccccc
Q 045630 94 SPIKY--GHVLLIPRVLECLLQRIDCVSFLLALYTAAGAGNPHFRLGYNSL----GAFATINHLHFQASYMALPFPIQKA 167 (240)
Q Consensus 94 sPIe~--~H~LlvP~~~~~lpQ~it~~~l~la~~~~~~~~~p~frvgyNSl----GA~AsVNHLHFqa~y~~~~lpvE~a 167 (240)
||-.| -|+. +=.-+| .|--|+.+++.-.++|.-.. |++-+|=|+= |++-= .|=|||++ .+.||+++|
T Consensus 214 SPY~YynEH~I-~l~~eH-~pM~Is~~tFerlL~f~dqf--PhYfiGSNADLPIVGGSIL-sHDHyQgG--~h~FpMakA 286 (503)
T COG4468 214 SPYVYYNEHCI-ILNGEH-RPMKISRKTFERLLSFLDQF--PHYFIGSNADLPIVGGSIL-SHDHYQGG--RHEFPMAKA 286 (503)
T ss_pred ccceeecceeE-EecCCc-ccceecHHHHHHHHHHHHhC--CcccccCCCCCCcccceec-cccccccc--ccccccccc
Confidence 67665 4766 556677 89999999999988877654 5788999974 55433 59999999 789999999
Q ss_pred CCcce--eeecCceEEEEecCCceeeEEEEeCC--cHHHHHHHHHHHc--------cccc-cCCCccEEE
Q 045630 168 PTRKI--ITSGGCVKISELFNYPVRGLVFEGGN--SLQDLSNTVSDAC--------VCLQ-ENNIPYNVL 224 (240)
Q Consensus 168 ~~~~l--~~~~~g~~v~~l~dyP~~~~vf~~~~--~~~~l~~~V~~~~--------~~L~-~~niphNl~ 224 (240)
+.+.- ....+++.. -++.||+..+.++|.+ .+.++++.|.+.- +.+. ....|||-.
T Consensus 287 ~~eke~~~~~fp~V~a-GiVKWPMSVlRL~s~nk~~L~~lAd~il~~Wr~YSDe~~~I~a~T~dtpHnTI 355 (503)
T COG4468 287 ELEKEFSFKGFPDVSA-GIVKWPMSVLRLQSKNKVELIKLADKILKKWREYSDEEVQILAYTGDTPHNTI 355 (503)
T ss_pred chhheeeecCCCcccc-ceeecchhheeeccCCHHHHHHHHHHHHHHHHHhcchhcceeeccCCCCCccc
Confidence 98763 222344433 2679999999999876 7788888887652 3332 566899973
No 18
>KOG3379 consensus Diadenosine polyphosphate hydrolase and related proteins of the histidine triad (HIT) family [Nucleotide transport and metabolism; General function prediction only]
Probab=95.97 E-value=0.0099 Score=49.54 Aligned_cols=67 Identities=21% Similarity=0.300 Sum_probs=45.4
Q ss_pred eEEEEeccCCCCCeEEEccccCcccccccC-------hhHHHHHHHHHH---cc-CCCceEEEe-cCCCCCCCcceeEEe
Q 045630 87 SVVSINVSPIKYGHVLLIPRVLECLLQRID-------CVSFLLALYTAA---GA-GNPHFRLGY-NSLGAFATINHLHFQ 154 (240)
Q Consensus 87 ~~vlIN~sPIe~~H~LlvP~~~~~lpQ~it-------~~~l~la~~~~~---~~-~~p~frvgy-NSlGA~AsVNHLHFq 154 (240)
..+++|--|+-+||+|++|.+. -++++ .|.+.-+-...+ .. +-.++.++- .|+.|.-||-|.|+|
T Consensus 26 sfafvNlkPvvpgHVLv~P~R~---vpRl~dLt~~E~aDlF~t~~~v~~~lek~~~~ts~ti~iQDG~~AGQTVpHvHvH 102 (150)
T KOG3379|consen 26 SFAFVNLKPVVPGHVLVSPLRV---VPRLTDLTAAETADLFTTVQKVQRVLEKHYNATSLTIAIQDGPEAGQTVPHVHVH 102 (150)
T ss_pred eEEEEeccccccceEEEecccc---ccccccCCcHHHHHHHHHHHHHHHHHHHHhcccceEEEeccccccCcccceeEEE
Confidence 4599999999999999999873 35554 333333322222 21 122355543 577999999999999
Q ss_pred ee
Q 045630 155 AS 156 (240)
Q Consensus 155 a~ 156 (240)
..
T Consensus 103 Il 104 (150)
T KOG3379|consen 103 IL 104 (150)
T ss_pred Ec
Confidence 87
No 19
>TIGR00209 galT_1 galactose-1-phosphate uridylyltransferase, family 1. This enzyme is involved in glucose and galactose interconversion. This model describes one of two extremely distantly related branches of the model pfam01087 from PFAM.
Probab=95.82 E-value=0.024 Score=53.49 Aligned_cols=74 Identities=12% Similarity=0.025 Sum_probs=44.3
Q ss_pred CCCCeEEEEeccCCCCCeEEEccccCcccccccChhHHHHHH----HHHH----cc-CCCceEEEecCC---CCCCCcce
Q 045630 83 ENSPSVVSINVSPIKYGHVLLIPRVLECLLQRIDCVSFLLAL----YTAA----GA-GNPHFRLGYNSL---GAFATINH 150 (240)
Q Consensus 83 ~~~~~~vlIN~sPIe~~H~LlvP~~~~~lpQ~it~~~l~la~----~~~~----~~-~~p~frvgyNSl---GA~AsVNH 150 (240)
+++..++++..+|..+||+++||.....----++.+.+.... ++++ .. .++.|.+|+|.. |.....=|
T Consensus 215 End~fvAf~p~~p~~Pgh~lIiPKrH~~~~~dl~d~e~~~La~~lk~v~~~l~~~~~~~~pYn~~~h~~p~~~~~~~~~H 294 (347)
T TIGR00209 215 ETEHWIAVVPYWAIWPFETLLLPKAHVLRITDLTDAQRSDLALILKKLTSKYDNLFETSFPYSMGWHGAPFNGEENQHWQ 294 (347)
T ss_pred ECCCEEEEeccCCCCCCeEEEeeccCCCChhhCCHHHHHHHHHHHHHHHHHHHHHhCCCCCcceeEEecccCCCCCcEEE
Confidence 467788999999999999999997655333334433222222 2222 22 455688888776 43333334
Q ss_pred eEEeee
Q 045630 151 LHFQAS 156 (240)
Q Consensus 151 LHFqa~ 156 (240)
+|+|.+
T Consensus 295 ~Hihii 300 (347)
T TIGR00209 295 LHAHFY 300 (347)
T ss_pred EEEEEe
Confidence 555555
No 20
>PLN02643 ADP-glucose phosphorylase
Probab=95.11 E-value=0.09 Score=49.39 Aligned_cols=74 Identities=15% Similarity=0.070 Sum_probs=47.8
Q ss_pred CCCCeEEEEeccCCCCCeEEEccccCcccccccChhHHHH---HHH-----HHHccCCCceEEEecCC---CCCCCccee
Q 045630 83 ENSPSVVSINVSPIKYGHVLLIPRVLECLLQRIDCVSFLL---ALY-----TAAGAGNPHFRLGYNSL---GAFATINHL 151 (240)
Q Consensus 83 ~~~~~~vlIN~sPIe~~H~LlvP~~~~~lpQ~it~~~l~l---a~~-----~~~~~~~p~frvgyNSl---GA~AsVNHL 151 (240)
+++..++++...|..+||++++|.....-..-+|.+.+.. ++. +-.....+.|.++.|+. ++...+.|.
T Consensus 214 en~~f~Af~p~ap~~P~evlIiPKrH~~~~~dl~~~e~~~La~ilk~v~~~l~~~~~~~pyN~~~~~~P~~~~~~~~~~~ 293 (336)
T PLN02643 214 ESSHFVSIAPFAATFPFEIWIIPRDHSSNFHEIDDDKAVDLGGLLKLMLQKISKQLNDPPYNYMIQTSPLGVEESNLPYT 293 (336)
T ss_pred eCCCEEEEeccccCCCCEEEEEeccccCChhhCCHHHHHHHHHHHHHHHHHHHHhcCCCCceeeeecCCCccccCcccce
Confidence 4677889999999999999999987665555556432222 221 11233455777777765 234456778
Q ss_pred EEeee
Q 045630 152 HFQAS 156 (240)
Q Consensus 152 HFqa~ 156 (240)
|||.=
T Consensus 294 H~hih 298 (336)
T PLN02643 294 HWFLQ 298 (336)
T ss_pred EEEEE
Confidence 77554
No 21
>cd00608 GalT Galactose-1-phosphate uridyl transferase (GalT): This enzyme plays a key role in galactose metabolism by catalysing the transfer of a uridine 5'-phosphoryl group from UDP-galactose 1-phosphate. The structure of E.coli GalT reveals that the enzyme contains two identical subunits. It also demonstrates that the active site is formed by amino acid residues from both subunits of the dimer.
Probab=95.05 E-value=0.076 Score=49.44 Aligned_cols=74 Identities=15% Similarity=0.068 Sum_probs=45.9
Q ss_pred CCCCeEEEEeccCCCCCeEEEccccCcccccccChhHHH-------HHH-HHHHccC-CCceEEEecCC---C--CCCCc
Q 045630 83 ENSPSVVSINVSPIKYGHVLLIPRVLECLLQRIDCVSFL-------LAL-YTAAGAG-NPHFRLGYNSL---G--AFATI 148 (240)
Q Consensus 83 ~~~~~~vlIN~sPIe~~H~LlvP~~~~~lpQ~it~~~l~-------la~-~~~~~~~-~p~frvgyNSl---G--A~AsV 148 (240)
+++..++++=..|..+||++++|.....-..-+|.+... .++ .+-.... ++.|.+++|+. | +.-++
T Consensus 205 end~~va~~p~~~~~P~e~lIiPKrH~~~~~dl~~~e~~~La~~l~~v~~~l~~~~~~~~pyn~~~h~~P~~~~~~~~~~ 284 (329)
T cd00608 205 ENEHFVAVVPFWARWPFEVHILPKRHVSRFTDLTDEEREDLAEILKRLLARYDNLFNCSFPYSMGWHQAPTGGKELENWY 284 (329)
T ss_pred eCCCEEEEEecCCCCCcEEEEecCCCcCChhHCCHHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEeccCCCCCcCCcce
Confidence 456677888888999999999997754333444433222 222 1112234 56788888765 2 23466
Q ss_pred ceeEEeee
Q 045630 149 NHLHFQAS 156 (240)
Q Consensus 149 NHLHFqa~ 156 (240)
-|+|+|.+
T Consensus 285 ~H~Hihi~ 292 (329)
T cd00608 285 YHWHFEIP 292 (329)
T ss_pred EEEEEEeC
Confidence 78888876
No 22
>KOG4359 consensus Protein kinase C inhibitor-like protein [General function prediction only]
Probab=93.18 E-value=0.27 Score=41.31 Aligned_cols=75 Identities=17% Similarity=0.252 Sum_probs=54.0
Q ss_pred CCCCeEEEEeccCCCCCeEEEccccCcccccccChhHH-------HHHHHHHHccC---CCceEEEecCCCCCCCcceeE
Q 045630 83 ENSPSVVSINVSPIKYGHVLLIPRVLECLLQRIDCVSF-------LLALYTAAGAG---NPHFRLGYNSLGAFATINHLH 152 (240)
Q Consensus 83 ~~~~~~vlIN~sPIe~~H~LlvP~~~~~lpQ~it~~~l-------~la~~~~~~~~---~p~frvgyNSlGA~AsVNHLH 152 (240)
+++.++++=...|-..-|.|.||.-.-.-|--++.+.+ ..+....++.. -...||||--| -+-||-|||
T Consensus 52 En~~~V~fkDikPaA~~HYLvipK~Hi~~~~~L~k~~V~Lve~m~~~G~~~l~r~~~td~~~~r~GFHLP-Pf~SV~HLH 130 (166)
T KOG4359|consen 52 ENEDLVCFKDIKPAATHHYLVVPKKHIGNCRTLRKDQVELVENMVTVGKTILERNNFTDFTNVRMGFHLP-PFCSVSHLH 130 (166)
T ss_pred cCCcEEEEecCCccccceEEEechHHcCChhhcchhhHHHHHHHHHHHHHHHHHhccCCchheeEeccCC-Ccceeeeee
Confidence 46667777789999999999999766555666664444 44444444443 23689999865 477899999
Q ss_pred Eeeeec
Q 045630 153 FQASYM 158 (240)
Q Consensus 153 Fqa~y~ 158 (240)
+|..|-
T Consensus 131 lH~I~P 136 (166)
T KOG4359|consen 131 LHVIAP 136 (166)
T ss_pred Eeeecc
Confidence 999854
No 23
>PF04677 CwfJ_C_1: Protein similar to CwfJ C-terminus 1; InterPro: IPR006768 This group of sequences contain a conserved C-terminal domain which is found in the Schizosaccharomyces pombe (Fission yeast) protein Cwf19 (Q09909 from SWISSPROT) and its homologues. Cwf19 is part of the Cdc5p complex involved in mRNA splicing []. This domain is found in association with IPR006767 from INTERPRO, which is generally C-terminal and adjacent to this domain.
Probab=88.28 E-value=3.7 Score=33.13 Aligned_cols=98 Identities=15% Similarity=0.231 Sum_probs=54.8
Q ss_pred CcceEEEEeeeCCCceeeeecCCCccCCCCCeEEEEeccCCCCCeEEEccccCcccccccChh------HHHHHHHHHHc
Q 045630 56 GQEEVLFQFEASEDCEVQFHLSAPFDVENSPSVVSINVSPIKYGHVLLIPRVLECLLQRIDCV------SFLLALYTAAG 129 (240)
Q Consensus 56 ~~~EvlF~f~~~~~~~~~~~~~~~~~~~~~~~~vlIN~sPIe~~H~LlvP~~~~~lpQ~it~~------~l~la~~~~~~ 129 (240)
.+++=-||+...+-...+.. ...+.-+ +.+-.-||..||+++||--...--..+++| .++.++.-|-.
T Consensus 9 ~~~~C~fCl~n~~~~khlii-----siG~~~Y-Lalpkg~L~~gH~lIvPi~H~~s~~~~de~~~~Ei~~f~~~L~~mf~ 82 (121)
T PF04677_consen 9 APDNCWFCLSNPNVEKHLII-----SIGDEVY-LALPKGPLVPGHCLIVPIQHVPSLTELDEEVWEEIRNFQKSLRKMFA 82 (121)
T ss_pred CCCCCCCccCCCCccceEEE-----EEcCcEE-EEeCCCCccCCEEEEEecceecccccCCHHHHHHHHHHHHHHHHHHH
Confidence 44555677765432222221 2223334 455559999999999997655333333332 34445555555
Q ss_pred cCCCceEEEecCCCCCCCcceeEEeeeecCCcccccc
Q 045630 130 AGNPHFRLGYNSLGAFATINHLHFQASYMALPFPIQK 166 (240)
Q Consensus 130 ~~~p~frvgyNSlGA~AsVNHLHFqa~y~~~~lpvE~ 166 (240)
+.+.+. |+|=--.. ..-|+|.|+. |+|-+.
T Consensus 83 ~~~~~v-vf~E~~~~--~~~H~~iq~v----Pvp~~~ 112 (121)
T PF04677_consen 83 SQGKDV-VFFERVRK--RNPHTHIQCV----PVPKEL 112 (121)
T ss_pred HcCCCE-EEEEEeCC--CCcEEEEEEE----EcCHHH
Confidence 566665 55543222 2359999998 665443
No 24
>KOG0562 consensus Predicted hydrolase (HIT family) [General function prediction only]
Probab=87.12 E-value=0.95 Score=39.07 Aligned_cols=69 Identities=22% Similarity=0.245 Sum_probs=42.6
Q ss_pred CeEEEEeccCCCCCeEEEccccCcccccccC--hhHHHHH-----------HHHHHccCCCceEEEecCCCCCCCcceeE
Q 045630 86 PSVVSINVSPIKYGHVLLIPRVLECLLQRID--CVSFLLA-----------LYTAAGAGNPHFRLGYNSLGAFATINHLH 152 (240)
Q Consensus 86 ~~~vlIN~sPIe~~H~LlvP~~~~~lpQ~it--~~~l~la-----------~~~~~~~~~p~frvgyNSlGA~AsVNHLH 152 (240)
..+||--.+|=...|.|+.|+... ++-.-. ++.|++. -++.-+...-+|||||-+ --|.||||
T Consensus 24 ~vvvIrD~fPKa~~H~LvLpr~s~-i~~l~~~~qe~l~ll~~~h~~~~~~v~~~~~~~~~~~f~vG~Ha---vPSM~~LH 99 (184)
T KOG0562|consen 24 DVVVIRDKFPKARMHLLVLPRRSS-IDSLFSVVQEHLSLLKEDHAVGPCWVDQLTNEALCNYFRVGFHA---VPSMNNLH 99 (184)
T ss_pred cEEEEcccCccceeEEEEecccch-hHHHHHHHHHHhhHhHHHhhcCchHHHHhcchhhhhheeeeecc---Ccchhhee
Confidence 455666689999999999996443 332222 2222221 122222224489999984 56788999
Q ss_pred Eeeeec
Q 045630 153 FQASYM 158 (240)
Q Consensus 153 Fqa~y~ 158 (240)
+|..=.
T Consensus 100 LHVISk 105 (184)
T KOG0562|consen 100 LHVISK 105 (184)
T ss_pred EEEeec
Confidence 999844
No 25
>KOG2476 consensus Uncharacterized conserved protein [Function unknown]
Probab=82.55 E-value=1.8 Score=42.72 Aligned_cols=47 Identities=15% Similarity=0.244 Sum_probs=30.8
Q ss_pred CCcceEEEEeeeCCCceeeeecCCCccCCCCCeEEEEeccCCCCCeEEEcccc
Q 045630 55 MGQEEVLFQFEASEDCEVQFHLSAPFDVENSPSVVSINVSPIKYGHVLLIPRV 107 (240)
Q Consensus 55 v~~~EvlF~f~~~~~~~~~~~~~~~~~~~~~~~~vlIN~sPIe~~H~LlvP~~ 107 (240)
+.+.+--||+...+-...+.. .+ +....++.=.-||.-+|+|++|--
T Consensus 316 ~~pg~CwFCLSnP~vEkHLIV-----sI-G~~~YlAlaKGpLs~~HvlIipi~ 362 (528)
T KOG2476|consen 316 IPPGSCWFCLSNPNVEKHLIV-----SI-GNHFYLALAKGPLSSDHVLIIPIE 362 (528)
T ss_pred CCCCceEEEecCCChhhheEE-----Ee-cceeEEeecCCCCCCCeEEEEEcc
Confidence 577888899876654322221 11 234456777889999999988843
No 26
>KOG2720 consensus Predicted hydrolase (HIT family) [General function prediction only]
Probab=52.23 E-value=20 Score=34.51 Aligned_cols=20 Identities=55% Similarity=0.938 Sum_probs=17.5
Q ss_pred ceeeccccccCCcceEEEEeeeC
Q 045630 45 AEFRVEKVYQMGQEEVLFQFEAS 67 (240)
Q Consensus 45 ~~f~~~~v~qv~~~EvlF~f~~~ 67 (240)
..|+|+| |+++|+||.|..+
T Consensus 137 ~~FNF~K---v~~~Ellf~~k~~ 156 (431)
T KOG2720|consen 137 MKFNFTK---VGQEELLFQFKAA 156 (431)
T ss_pred ceecccc---cccceEEEEEecC
Confidence 5688999 6999999999877
No 27
>smart00750 KIND kinase non-catalytic C-lobe domain. It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features
Probab=41.91 E-value=20 Score=28.52 Aligned_cols=31 Identities=16% Similarity=0.052 Sum_probs=26.5
Q ss_pred cHHHHHHHHHHHccccccCCCccEEEEEeCC
Q 045630 199 SLQDLSNTVSDACVCLQENNIPYNVLIVDCG 229 (240)
Q Consensus 199 ~~~~l~~~V~~~~~~L~~~niphNl~it~~g 229 (240)
....++..|.+++.+||+++-|+|++++.++
T Consensus 18 ~~~~i~~qi~~~L~~lH~~~kp~Nil~~~~~ 48 (176)
T smart00750 18 EIWAVCLQCLRALRELHRQAKSGNILLTWDG 48 (176)
T ss_pred HHHHHHHHHHHHHHHHHhcCCcccEeEcCcc
Confidence 4667788888999999999999999998765
No 28
>PRK05471 CDP-diacylglycerol pyrophosphatase; Provisional
Probab=38.94 E-value=49 Score=30.32 Aligned_cols=65 Identities=20% Similarity=0.086 Sum_probs=49.5
Q ss_pred cCCCCCeEEEccccCcc---cccccC---hhHHHHHHH--------HHHccCCCceEEEecCCCCCCCcceeEEeeeecC
Q 045630 94 SPIKYGHVLLIPRVLEC---LLQRID---CVSFLLALY--------TAAGAGNPHFRLGYNSLGAFATINHLHFQASYMA 159 (240)
Q Consensus 94 sPIe~~H~LlvP~~~~~---lpQ~it---~~~l~la~~--------~~~~~~~p~frvgyNSlGA~AsVNHLHFqa~y~~ 159 (240)
-+..+.|.||+|...-. =|+.++ ++.+..|+. .-..+.+...-+.=||-.+= |-||||-|.-.++
T Consensus 69 D~~Gp~qyLLiPt~rIsGIEsP~Ll~~~tpnyf~~AW~aR~~v~~~~g~pipd~~lsLaINS~~gR-SQnQLHIHIsClr 147 (252)
T PRK05471 69 DRNGPLQYLLMPTYRISGIESPLLLEPSTPNYFALAWQARDFMSKKYGKPIPDSAVSLAINSRYGR-TQDQLHIHISCLR 147 (252)
T ss_pred cCCCCcceEEeecccccCccCccccCCCCccHHHHHHHHhHHHHHhhCCCCChhheEEEecCCCCc-cccceeeehhhCC
Confidence 78889999999975421 266665 678888876 23345677899999999765 5599999998885
No 29
>PF02611 CDH: CDP-diacylglycerol pyrophosphatase; InterPro: IPR003763 The CDP-diacylglycerol pyrophosphatases 3.6.1.26 from EC play a role in the regulation of phospholipid metabolism by inositol, as well as regulating the cellular levels of phosphatidylinositol [].; GO: 0008715 CDP-diacylglycerol diphosphatase activity, 0008654 phospholipid biosynthetic process, 0016020 membrane; PDB: 2POF_A.
Probab=38.06 E-value=70 Score=28.70 Aligned_cols=67 Identities=16% Similarity=0.020 Sum_probs=38.0
Q ss_pred ccCCCCCeEEEccccCcc---cccccC---hhHHHHHH---HHHH-----ccCCCceEEEecCCCCCCCcceeEEeeeec
Q 045630 93 VSPIKYGHVLLIPRVLEC---LLQRID---CVSFLLAL---YTAA-----GAGNPHFRLGYNSLGAFATINHLHFQASYM 158 (240)
Q Consensus 93 ~sPIe~~H~LlvP~~~~~---lpQ~it---~~~l~la~---~~~~-----~~~~p~frvgyNSlGA~AsVNHLHFqa~y~ 158 (240)
+-|..+.|+||||...-. =|+.++ ++.+..|+ +++. .+.+..+-++=||-.+= |-||||-|.-.+
T Consensus 39 Kd~~G~~qyLL~Pt~rIsGIEsP~Ll~~~~pNyf~~AW~aR~~v~~~~g~~lpd~~lsLaINS~~gR-sQdQLHIHisCl 117 (222)
T PF02611_consen 39 KDRNGPLQYLLMPTDRISGIESPALLEPRTPNYFADAWQARGFVSQKLGKPLPDDDLSLAINSQYGR-SQDQLHIHISCL 117 (222)
T ss_dssp E-SSSSS-EEEEESS---STT-GGGGSTTS--HHHHHHHTTHHHHHHHTS---GGGEEEEEB-GGG--S--S--EEEEEB
T ss_pred eCCCCCccEEEeeccccCCccChhhcCCCCccHHHHHHHhhHHHHHhcCCCCCccceEEEecCccCc-cccceEeEhhhc
Confidence 358999999999975421 266655 66778887 2222 35577899999999654 569999999888
Q ss_pred CC
Q 045630 159 AL 160 (240)
Q Consensus 159 ~~ 160 (240)
..
T Consensus 118 rp 119 (222)
T PF02611_consen 118 RP 119 (222)
T ss_dssp -H
T ss_pred CH
Confidence 53
No 30
>cd00608 GalT Galactose-1-phosphate uridyl transferase (GalT): This enzyme plays a key role in galactose metabolism by catalysing the transfer of a uridine 5'-phosphoryl group from UDP-galactose 1-phosphate. The structure of E.coli GalT reveals that the enzyme contains two identical subunits. It also demonstrates that the active site is formed by amino acid residues from both subunits of the dimer.
Probab=35.75 E-value=1.6e+02 Score=27.30 Aligned_cols=25 Identities=20% Similarity=-0.043 Sum_probs=20.7
Q ss_pred ceEEEecCC-CCCCCcceeEEeeeec
Q 045630 134 HFRLGYNSL-GAFATINHLHFQASYM 158 (240)
Q Consensus 134 ~frvgyNSl-GA~AsVNHLHFqa~y~ 158 (240)
+.-+|-|-. -|.||.-|-|-|.|=+
T Consensus 137 yv~if~N~G~~aGaSl~HpH~Qi~a~ 162 (329)
T cd00608 137 YVQIFENKGAEMGASLPHPHGQIWAL 162 (329)
T ss_pred EEEEEeecCcccccCCCCCCeeeeeC
Confidence 677888877 7788999999999944
No 31
>COG1085 GalT Galactose-1-phosphate uridylyltransferase [Energy production and conversion]
Probab=23.93 E-value=96 Score=29.61 Aligned_cols=29 Identities=21% Similarity=0.008 Sum_probs=23.9
Q ss_pred CCCceEEEecCC-CCCCCcceeEEeeeecC
Q 045630 131 GNPHFRLGYNSL-GAFATINHLHFQASYMA 159 (240)
Q Consensus 131 ~~p~frvgyNSl-GA~AsVNHLHFqa~y~~ 159 (240)
.-++..+|=|.. -+.||..|.|-|+|-++
T Consensus 135 ~~~yV~iF~N~Gk~~G~S~~HPH~Qi~a~~ 164 (338)
T COG1085 135 KYKYVQIFENKGKAAGASLPHPHGQIVALP 164 (338)
T ss_pred CcceEEeeeccCcccCccCCCCCcceeecc
Confidence 356899999998 56678889999999664
No 32
>TIGR00672 cdh CDP-diacylglycerol pyrophosphatase, bacterial type. Alternate names for this enzyme include CDP-diglyceride hydrolase and CDP-diacylglycerol hydrolase.
Probab=23.72 E-value=1.2e+02 Score=27.77 Aligned_cols=73 Identities=22% Similarity=0.076 Sum_probs=51.1
Q ss_pred CCeEEEEeccCCCCCeEEEccccCcc---cccccC---hhHHHHHH---HHHH-----ccCCCceEEEecCCCCCCCcce
Q 045630 85 SPSVVSINVSPIKYGHVLLIPRVLEC---LLQRID---CVSFLLAL---YTAA-----GAGNPHFRLGYNSLGAFATINH 150 (240)
Q Consensus 85 ~~~~vlIN~sPIe~~H~LlvP~~~~~---lpQ~it---~~~l~la~---~~~~-----~~~~p~frvgyNSlGA~AsVNH 150 (240)
.+++|+= -+..+.|.||+|...-. =|+.++ ++.+..|+ +++. .+.|...-+.=||-.|= |-||
T Consensus 61 ~gyvvlK--D~~Gp~qyLLmPt~rIsGIEsP~Ll~~~tpnyf~~AW~aR~~v~~~~g~pipd~~lsLaINS~~gR-SQnQ 137 (250)
T TIGR00672 61 AGYVVLK--DLNGPLQYLLMPTYRINGTESPLLLDPSTPNFFWLAWQARDFMSKKYGQPIPDRAVSLAINSRTGR-SQNH 137 (250)
T ss_pred CCeEEEe--CCCCCceeEEeeccccCCccChhhcCCCCccHHHHHHHHhHHHHHhcCCCCChhheeEEecCCCCc-cccc
Confidence 3455553 34889999999975421 266665 66788887 3333 34567899999999765 5599
Q ss_pred eEEeeeecCC
Q 045630 151 LHFQASYMAL 160 (240)
Q Consensus 151 LHFqa~y~~~ 160 (240)
||-|.-.++.
T Consensus 138 LHIHIsClrp 147 (250)
T TIGR00672 138 FHIHISCIRP 147 (250)
T ss_pred ceeeHhhCCH
Confidence 9999988853
Done!