Query 045631
Match_columns 600
No_of_seqs 127 out of 143
Neff 3.5
Searched_HMMs 46136
Date Fri Mar 29 03:54:36 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/045631.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/045631hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PF05003 DUF668: Protein of un 100.0 7.6E-44 1.7E-48 307.5 7.9 86 345-430 1-89 (89)
2 PF11961 DUF3475: Domain of un 99.9 1.8E-27 4E-32 191.4 3.9 57 158-214 1-57 (57)
3 PF05527 DUF758: Domain of unk 68.5 70 0.0015 32.3 11.2 124 210-367 34-182 (186)
4 PHA02602 56 dCTP pyrophosphata 57.5 93 0.002 31.2 9.6 106 211-322 7-142 (172)
5 TIGR02865 spore_II_E stage II 55.2 1.1E+02 0.0023 36.5 11.5 160 114-276 189-387 (764)
6 KOG3498 Preprotein translocase 25.2 50 0.0011 28.6 1.9 30 213-242 6-35 (67)
7 KOG4403 Cell surface glycoprot 22.4 1.5E+02 0.0033 33.9 5.4 90 195-294 167-263 (575)
8 PF09139 Mmp37: Mitochondrial 22.0 1.2E+02 0.0026 33.0 4.5 50 371-420 241-302 (330)
9 PRK03333 coaE dephospho-CoA ki 20.7 1.2E+02 0.0027 33.0 4.3 72 355-430 131-203 (395)
10 PF01418 HTH_6: Helix-turn-hel 19.9 84 0.0018 26.4 2.3 66 165-241 2-67 (77)
No 1
>PF05003 DUF668: Protein of unknown function (DUF668); InterPro: IPR007700 This is a family of uncharacterised plant proteins of unknown function.
Probab=100.00 E-value=7.6e-44 Score=307.48 Aligned_cols=86 Identities=62% Similarity=0.957 Sum_probs=85.1
Q ss_pred CcchhhhhhhhHHHHHHHHHhhhcCCCCCCchHHHhhccCchHHHHHHHhcccccccc---chhhHHHHHHHHHHHhhhh
Q 045631 345 KLGSAGLALHYANIVTQIDTLVSRSSSVPPNTRDALYQGLPPTIKSALRSKLQLFQVK---EELTIQQIKAEMEKTLQWL 421 (600)
Q Consensus 345 TLG~AgLALHYANIIi~IEkLvs~p~~v~~~aRD~LYqmLP~sIRsaLRskLr~~~~~---de~la~ewk~amekiL~WL 421 (600)
|||+|||||||||||+|||+|+++|++||+|+||+||||||++||++||+|||+|++. |+.+++|||++|+|||+||
T Consensus 1 tLG~AgLALhYANvI~~ie~l~~~p~~v~~~aRD~LY~mLP~~ir~aLr~kL~~~~~~~~~d~~~a~~~~~~m~kiL~WL 80 (89)
T PF05003_consen 1 TLGGAGLALHYANVIIQIEKLVSRPSSVPPNARDDLYQMLPPSIRSALRSKLRSYWKKAIYDELLAAEWKDAMEKILEWL 80 (89)
T ss_pred CcchHHHHHHHHHHHHHHHHHHcCcccCCchHHHHHHhhCcHHHHHHHHHhccccccccccchhhHHHHHHHHHHHHHHH
Confidence 8999999999999999999999999999999999999999999999999999999999 9999999999999999999
Q ss_pred hhhhhhccc
Q 045631 422 VPIATNTTK 430 (600)
Q Consensus 422 aPmAhNTir 430 (600)
+||||||+|
T Consensus 81 ~P~A~nt~r 89 (89)
T PF05003_consen 81 APMAHNTIR 89 (89)
T ss_pred HHHHHhccC
Confidence 999999997
No 2
>PF11961 DUF3475: Domain of unknown function (DUF3475); InterPro: IPR021864 This presumed domain is functionally uncharacterised. This domain is found in eukaryotes. This domain is about 60 amino acids in length. This domain is found associated with PF05003 from PFAM.
Probab=99.94 E-value=1.8e-27 Score=191.36 Aligned_cols=57 Identities=61% Similarity=0.746 Sum_probs=56.4
Q ss_pred eehhhHHHHHHHHHHhhhhCCHHHHHHhhhhccCccccccccccChHHHHHHHHHHH
Q 045631 158 ILAFEVANTIVKGANLMQSLSKENIKHLKEVVLPSEGVQNLISRDMDELLRIAAADK 214 (600)
Q Consensus 158 ILAFEVAntmsK~~~L~~SLSd~~I~~Lr~evL~SeGVq~LVS~D~~~LL~LA~AEk 214 (600)
||||||||||+|++||||||||++|.+||+||++|||||+|||+|++|||+||||||
T Consensus 1 ILAFEVAn~msk~~~L~~SLsd~~i~~Lr~evl~seGV~~LVS~D~~~LL~La~aE~ 57 (57)
T PF11961_consen 1 ILAFEVANTMSKLVNLWQSLSDEEIARLREEVLRSEGVRKLVSDDDSFLLRLACAEK 57 (57)
T ss_pred CccHHHHHHHHHHHHHHHHcChHHHHHHHHHHhhhHHHHHHcCCCHHHHHHHHHhcC
Confidence 899999999999999999999999999999999999999999999999999999996
No 3
>PF05527 DUF758: Domain of unknown function (DUF758) ; InterPro: IPR008477 This is a family of eukaryotic proteins with unknown function, which are induced by tumour necrosis factor.; PDB: 3F4M_A.
Probab=68.51 E-value=70 Score=32.32 Aligned_cols=124 Identities=20% Similarity=0.215 Sum_probs=72.7
Q ss_pred HHHHHHHHHHHHHHHHhhhhccCCCcccCchhHHHHHhhcCCCccchhHHHHHHHHHHHHHHHHHHHHHHH-------HH
Q 045631 210 AAADKREELKVFSGEVVRFGNRCEDPQLHNLDRYFAKLGSELTPQNQLKEEARTIMDQLMTLVQYTAELYH-------EL 282 (600)
Q Consensus 210 A~AEk~eeL~~~A~~VaRlG~rC~DP~~hnfdr~F~~l~~~~~~~~~~~k~ae~~m~km~rlV~~Ta~LY~-------EL 282 (600)
..+|.+++|-.++.++. +.+++|++.++.+.+.|-...-||+ |+
T Consensus 34 tsselLD~ly~l~K~~t-----------------------------~~kkeA~ki~KniIKi~vKigvl~rn~qf~~eEl 84 (186)
T PF05527_consen 34 TSSELLDELYRLLKEYT-----------------------------GNKKEAEKIIKNIIKIVVKIGVLYRNNQFSDEEL 84 (186)
T ss_dssp HHHHHHHHHHHHHHHHH-----------------------------S-HHHHHHHHHHHHHHHHHHHHHHHTT---HHHH
T ss_pred hHHHHHHHHHHHHHHHh-----------------------------cCHHHHHHHHHHHHHHHHHhheeeecCCCCHHHH
Confidence 35666778877777654 3578999999999999999999986 77
Q ss_pred HHHHHHHHHHHHHH------H-------HhhhhhcHHHHHHHHHHHHHH-----HHHHHHHhhCCCCCCCCCCCCCCCCC
Q 045631 283 HAWTDLNKIIDASF------R-------KRIILMLLKEVMEKLVDTVHF-----LHLEIHEAFGSADGDRPVKGSQNSHK 344 (600)
Q Consensus 283 eaLd~lEq~Lr~~Q------r-------K~LWsrt~d~vVekLvriV~~-----i~~rI~~vFG~~~~~~~~~~~~~~~~ 344 (600)
..+++|-+.+++.. - +..-+..+.+.=..|..+|-- =|.||.+||+-.....-...-..+.
T Consensus 85 ~~~~~fr~k~~~~amt~iSF~eV~fTfD~~~L~~~L~ec~~~L~~lv~~HLT~KS~~Ri~~vF~~f~~~efL~~lf~~~- 163 (186)
T PF05527_consen 85 ALAEKFRKKFHQLAMTAISFYEVDFTFDRNYLSKLLKECRDLLHQLVEPHLTPKSHGRIDHVFNFFSDPEFLDALFSPD- 163 (186)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTSTTS---HHHHHHHHHHHHHHHHHHHTTTS-HHHHHHHHHHHHHHT-HHHHHHHTSG--
T ss_pred HHHHHHHHHHHHHHHHHhhhcccchhhhHHHHHHHHHHHHHHHHHHHHHhCChhhHHHHHHHHHhhCChHHHHHHhCcc-
Confidence 77777776655411 0 112233333333333333311 1789999997443210000001111
Q ss_pred CcchhhhhhhhHHHHHHHHHhhh
Q 045631 345 KLGSAGLALHYANIVTQIDTLVS 367 (600)
Q Consensus 345 TLG~AgLALHYANIIi~IEkLvs 367 (600)
|. .--|-.+|+.-+++|+-
T Consensus 164 --~~--~~~~L~~i~~~Lnklld 182 (186)
T PF05527_consen 164 --EE--YRDHLGKICDGLNKLLD 182 (186)
T ss_dssp ---G--GHHHHHHHHHHHHHHHH
T ss_pred --cc--hHHHHHHHHHHHHHHHh
Confidence 11 35577788888888864
No 4
>PHA02602 56 dCTP pyrophosphatase; Provisional
Probab=57.45 E-value=93 Score=31.16 Aligned_cols=106 Identities=19% Similarity=0.198 Sum_probs=66.3
Q ss_pred HHHHHHHHHHHHHHHhhhhccCCCcccCchhHHHHH-------hhcCCCc-----cchhHHHHHH---HHHHHHH-HHHH
Q 045631 211 AADKREELKVFSGEVVRFGNRCEDPQLHNLDRYFAK-------LGSELTP-----QNQLKEEART---IMDQLMT-LVQY 274 (600)
Q Consensus 211 ~AEk~eeL~~~A~~VaRlG~rC~DP~~hnfdr~F~~-------l~~~~~~-----~~~~~k~ae~---~m~km~r-lV~~ 274 (600)
||-..+.++.+..+..-.=.+-+|| |++.|+- +. +..| +..+ +.... =++...+ +..-
T Consensus 7 ca~li~~~~~a~~~y~~~l~~~~dp----Lq~m~dmQ~~lq~~l~-~~~p~~~~~p~~l-~t~ge~l~W~~~~~~ai~dE 80 (172)
T PHA02602 7 CAHLINGLDKAENAYKDILAENKDP----LQVMLDMQKSLQVRLA-NDKPEYNPHPDEL-KTCGEILDWLRNQDDYIADE 80 (172)
T ss_pred HHHHHhhHHHHHHHHHHHHHcCCCH----HHHHHHHHHHHHHHHc-ccccccCCCchhH-HHhhHHHHHHHHHHHHHHHH
Confidence 6677777777777766655666787 7777752 22 2111 1122 11222 2444444 4567
Q ss_pred HHHHHHHHHHHHHHHHHHH----HHHHHh--hhhhcH------H--HHHHHHHHHHHHHHHH
Q 045631 275 TAELYHELHAWTDLNKIID----ASFRKR--IILMLL------K--EVMEKLVDTVHFLHLE 322 (600)
Q Consensus 275 Ta~LY~ELeaLd~lEq~Lr----~~QrK~--LWsrt~------d--~vVekLvriV~~i~~r 322 (600)
|++||.+|.-|..=|.+-. -|.+.+ .=|+-| | ++-..|||+.||+..-
T Consensus 81 ~rEL~t~Lggmsng~k~~s~~WK~Wk~~h~e~rn~~f~~ls~eD~le~k~ElID~~HF~l~~ 142 (172)
T PHA02602 81 TRELYTSLGGMSNGEKDASAVWKPWKANHGEARNRLFSDLSPEDQLEIKFELIDQLHFVLNK 142 (172)
T ss_pred HHHHHHHhcccccCCccccccchHhhhhhhhhhhhhhcccCHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999998887665522 244443 777777 6 6788999999998765
No 5
>TIGR02865 spore_II_E stage II sporulation protein E. Stage II sporulation protein E (SpoIIE) is a multiple membrane spanning protein with two separable functions. It plays a role in the switch to polar cell division during sporulation. By means of it protein phosphatase activity, located in the C-terminal region, it activates sigma-F. All proteins that score above the trusted cutoff to this model are found in endospore-forming Gram-positive bacteria. Surprisingly, a sequence from the Cyanobacterium-like (and presumably non-spore-forming) photosynthesizer Heliobacillus mobilis is homologous, and scores between the trusted and noise cutoffs.
Probab=55.19 E-value=1.1e+02 Score=36.51 Aligned_cols=160 Identities=18% Similarity=0.160 Sum_probs=87.5
Q ss_pred hccccccCCCchhhhhhhhccccccCCCC--------CCcccccccCCCeee-eehhhHHHHHHHHHH-----hhhhCCH
Q 045631 114 LGRAGTVGLGKAVDVLDTLGSSMTSLNLG--------SGFTSGVTTKGNKIT-ILAFEVANTIVKGAN-----LMQSLSK 179 (600)
Q Consensus 114 lgra~~~glgkavevLdtlgssm~~l~~~--------~gf~sg~~~kg~kIg-ILAFEVAntmsK~~~-----L~~SLSd 179 (600)
.+-+|.+|+|-|+.|.--+..|+++.+.- +|+.+|.-.+++|+| +++|=+++++..+.. +...|-|
T Consensus 189 ~a~~gG~~~Gaa~Gv~~Gli~~l~~~~~~~~~~~~af~GLlaG~fk~~gK~g~~~g~~l~~~il~~y~~~~~~~~~~~~e 268 (764)
T TIGR02865 189 ISYIGGSGAGAAGGVVIGVILGLANNANLYQIGVFGFAGLLGGIFKELGKIGTGIGYLVGFLILAFYTQGSVAFSLALYE 268 (764)
T ss_pred HHHhcCchHhHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHhhccCCcceeeHHHHHHHHHHHHHhccchhHHHHHHH
Confidence 34567788999999999998888875432 266888888888865 689999998875542 1111111
Q ss_pred HHH-------------HHhhhhccCccccccccccChHHH--HHHHHHHHHHHHHHHHHHHhh-hhccCCCc----ccCc
Q 045631 180 ENI-------------KHLKEVVLPSEGVQNLISRDMDEL--LRIAAADKREELKVFSGEVVR-FGNRCEDP----QLHN 239 (600)
Q Consensus 180 ~~I-------------~~Lr~evL~SeGVq~LVS~D~~~L--L~LA~AEk~eeL~~~A~~VaR-lG~rC~DP----~~hn 239 (600)
--| .++...+ + |-++-....+.+. ++=..++|++++..+=.++++ |++.|.++ .=+.
T Consensus 269 ~~ia~~lFll~P~~~~~~~~~~~-~--~~~~~~~~~~~~~~~~~~~~~~rl~~~a~~~~~Ls~tf~~~~~~~~~~~~~~~ 345 (764)
T TIGR02865 269 ALIATLLFLLIPNKIYKKLERYL-D--GERKQPDLQEDYMRKVREIAAEKLEEFSEVFRELSNTFVEALASNEKLTMKRK 345 (764)
T ss_pred HHHHHHHHHHhhHHHHHHHHhhC-C--CchhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccccchhh
Confidence 111 2222221 1 2222111122222 333345555555444444443 43344332 1246
Q ss_pred hhHHHHHhhcCC-----CccchhHHHHHHHHHHHHHHHHHHH
Q 045631 240 LDRYFAKLGSEL-----TPQNQLKEEARTIMDQLMTLVQYTA 276 (600)
Q Consensus 240 fdr~F~~l~~~~-----~~~~~~~k~ae~~m~km~rlV~~Ta 276 (600)
.+.+|+.+.... .-...|.++.+...+.|..+.+..-
T Consensus 346 ~~~~~~~v~~~vC~~C~~~~~CW~~~~~~Ty~~~~~l~~~~e 387 (764)
T TIGR02865 346 SSYLLENLAERVCQSCNMKHRCWKREFDYTYSAMEELIENLE 387 (764)
T ss_pred HHHHHHHHhhchhhCCCCCchhhCcchHHHHHHHHHHHHHHH
Confidence 788888876533 2233455666666666666665533
No 6
>KOG3498 consensus Preprotein translocase, gamma subunit [Intracellular trafficking, secretion, and vesicular transport]
Probab=25.22 E-value=50 Score=28.59 Aligned_cols=30 Identities=27% Similarity=0.598 Sum_probs=24.5
Q ss_pred HHHHHHHHHHHHHhhhhccCCCcccCchhH
Q 045631 213 DKREELKVFSGEVVRFGNRCEDPQLHNLDR 242 (600)
Q Consensus 213 Ek~eeL~~~A~~VaRlG~rC~DP~~hnfdr 242 (600)
.+.+-++.|+++-.||-+||.-|.-..|-.
T Consensus 6 ~~~~~~~~f~k~s~rf~krC~KPdrKEf~k 35 (67)
T KOG3498|consen 6 QLVEPLRDFAKDSIRFVKRCTKPDRKEFTK 35 (67)
T ss_pred HhcchHHHHHHHHHHHHHHhcCCcHHHHHH
Confidence 356778999999999999999996665544
No 7
>KOG4403 consensus Cell surface glycoprotein STIM, contains SAM domain [General function prediction only]
Probab=22.37 E-value=1.5e+02 Score=33.85 Aligned_cols=90 Identities=17% Similarity=0.183 Sum_probs=54.8
Q ss_pred cccccccChHHH---HHHHHHHHHHHHHHHHHHHhhhhccCCCc-cc-CchhHHHHHhhcCCCccch--hHHHHHHHHHH
Q 045631 195 VQNLISRDMDEL---LRIAAADKREELKVFSGEVVRFGNRCEDP-QL-HNLDRYFAKLGSELTPQNQ--LKEEARTIMDQ 267 (600)
Q Consensus 195 Vq~LVS~D~~~L---L~LA~AEk~eeL~~~A~~VaRlG~rC~DP-~~-hnfdr~F~~l~~~~~~~~~--~~k~ae~~m~k 267 (600)
.-+|-+.+-+|+ |.|-----|+-|..-|=.|+=||---+++ .| .+|=-+|.-+..-.-.|.. -.+.+...|.|
T Consensus 167 lPRlAv~n~~f~~~~Lgikd~~hrQKlqLkalDvVLFGpp~~~~~n~~KD~iLv~lili~v~gcw~ay~Qnk~akehv~k 246 (575)
T KOG4403|consen 167 LPRLAVPNSDFLGKVLGIKDRSHRQKLQLKALDVVLFGPPYKTNHNWTKDFILVVLILIGVGGCWFAYRQNKKAKEHVNK 246 (575)
T ss_pred ccccccCchHHhhhhhccCchHHHHhhhhhhcceEEecCCcCCCcchhhhHHHHHHHHHHhhhhhhhhhhhhHHHHHHHH
Confidence 345556666665 44555556888888999999999766665 56 7788888776642222222 12455555555
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 045631 268 LMTLVQYTAELYHELHAWTDLNKIIDA 294 (600)
Q Consensus 268 m~rlV~~Ta~LY~ELeaLd~lEq~Lr~ 294 (600)
||+ -|+.|.+.||.|..
T Consensus 247 m~k----------dle~Lq~aEqsl~d 263 (575)
T KOG4403|consen 247 MMK----------DLEGLQRAEQSLED 263 (575)
T ss_pred HHH----------HHHHHHHHHHHHHH
Confidence 542 45566666666544
No 8
>PF09139 Mmp37: Mitochondrial matrix Mmp37; InterPro: IPR015222 MMp37 is a mitochondrial matrix protein that functions in the translocation of proteins across the mitochondrial inner membrane [].
Probab=21.95 E-value=1.2e+02 Score=32.98 Aligned_cols=50 Identities=16% Similarity=0.280 Sum_probs=39.0
Q ss_pred CCCCchHHHhhccCchHHHHHHHhcccccc------------ccchhhHHHHHHHHHHHhhh
Q 045631 371 SVPPNTRDALYQGLPPTIKSALRSKLQLFQ------------VKEELTIQQIKAEMEKTLQW 420 (600)
Q Consensus 371 ~v~~~aRD~LYqmLP~sIRsaLRskLr~~~------------~~de~la~ewk~amekiL~W 420 (600)
...+++|-.|-..||.+++..|..+..... ..|+.....++.++.+|..|
T Consensus 241 d~s~~~~~~~l~~LP~~~~~~l~~~~~~~~~~~d~~~~~~~ia~d~~~~~~v~~aI~~IV~~ 302 (330)
T PF09139_consen 241 DKSPSARAHLLRRLPKTLRSRLYRQYDRKGRNRDGEEFLRAIASDPDLREVVRRAIRRIVRR 302 (330)
T ss_pred CCCHHHHHHHHHHCCHHHHHHHHHHhccCCCccchhHHHHHHhcChhHHHHHHHHHHhHhhh
Confidence 467889999999999999999998876422 22556678888888888777
No 9
>PRK03333 coaE dephospho-CoA kinase/protein folding accessory domain-containing protein; Provisional
Probab=20.68 E-value=1.2e+02 Score=32.97 Aligned_cols=72 Identities=13% Similarity=0.161 Sum_probs=38.8
Q ss_pred hHHHHHHHHHhhhcCCCCCCchHHHhhccCchHHHHHHHhccccccccchhhHHHHHHHHHHHh-hhhhhhhhhccc
Q 045631 355 YANIVTQIDTLVSRSSSVPPNTRDALYQGLPPTIKSALRSKLQLFQVKEELTIQQIKAEMEKTL-QWLVPIATNTTK 430 (600)
Q Consensus 355 YANIIi~IEkLvs~p~~v~~~aRD~LYqmLP~sIRsaLRskLr~~~~~de~la~ewk~amekiL-~WLaPmAhNTir 430 (600)
+|..=++++++..+-..-..++...+..-.|..-| ..+-.+......+.++....+.+++ .||.|+||||--
T Consensus 131 ~ap~e~ri~Rl~~rRg~s~~~a~~ri~~Q~~~e~k----~~~AD~vIdN~~s~e~l~~~v~~~l~~~~~~~~~~~~~ 203 (395)
T PRK03333 131 DADVEVRVRRLVEQRGMAEADARARIAAQASDEQR----RAVADVWLDNSGTPDELVEAVRALWADRLLPFAHNLRA 203 (395)
T ss_pred ECCHHHHHHHHHhcCCCCHHHHHHHHHhcCChHHH----HHhCCEEEECCCCHHHHHHHHHHHHHHHHhhHHHHHhc
Confidence 45666777887764332222222222222332222 2222344444556677777776554 899999999953
No 10
>PF01418 HTH_6: Helix-turn-helix domain, rpiR family; InterPro: IPR000281 This domain contains a helix-turn-helix motif []. Every member of this family is N-terminal to a SIS domain IPR001347 from INTERPRO. Members of this family are probably regulators of genes involved in phosphosugar metobolism.; GO: 0003700 sequence-specific DNA binding transcription factor activity, 0006355 regulation of transcription, DNA-dependent; PDB: 2O3F_B 3IWF_B.
Probab=19.93 E-value=84 Score=26.43 Aligned_cols=66 Identities=21% Similarity=0.259 Sum_probs=46.4
Q ss_pred HHHHHHHHhhhhCCHHHHHHhhhhccCccccccccccChHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCcccCchh
Q 045631 165 NTIVKGANLMQSLSKENIKHLKEVVLPSEGVQNLISRDMDELLRIAAADKREELKVFSGEVVRFGNRCEDPQLHNLD 241 (600)
Q Consensus 165 ntmsK~~~L~~SLSd~~I~~Lr~evL~SeGVq~LVS~D~~~LL~LA~AEk~eeL~~~A~~VaRlG~rC~DP~~hnfd 241 (600)
|.+.|+-..+..|++.|-. |-.-|-++.+.+..+-..|..+.+.+--.+|+||.+++.=..|..|-
T Consensus 2 ~l~~~i~~~~~~ls~~e~~-----------Ia~yil~~~~~~~~~si~elA~~~~vS~sti~Rf~kkLG~~gf~efk 67 (77)
T PF01418_consen 2 NLLEKIRSQYNSLSPTEKK-----------IADYILENPDEIAFMSISELAEKAGVSPSTIVRFCKKLGFSGFKEFK 67 (77)
T ss_dssp -HHHHHHHHGGGS-HHHHH-----------HHHHHHH-HHHHCT--HHHHHHHCTS-HHHHHHHHHHCTTTCHHHHH
T ss_pred cHHHHHHHHHhhCCHHHHH-----------HHHHHHhCHHHHHHccHHHHHHHcCCCHHHHHHHHHHhCCCCHHHHH
Confidence 4566777788889888754 34455567888888999999999999999999999999855554443
Done!