Query 045642
Match_columns 406
No_of_seqs 176 out of 1214
Neff 6.9
Searched_HMMs 29240
Date Mon Mar 25 06:32:24 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/045642.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/045642hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3a11_A Translation initiation 100.0 4.7E-73 1.6E-77 562.8 33.1 311 6-398 21-331 (338)
2 2yvk_A Methylthioribose-1-phos 100.0 2.3E-67 7.9E-72 526.5 29.9 304 6-396 57-371 (374)
3 1t5o_A EIF2BD, translation ini 100.0 8.2E-67 2.8E-71 519.4 29.9 300 6-394 30-340 (351)
4 1t9k_A Probable methylthioribo 100.0 2.1E-66 7.2E-71 515.7 30.5 298 6-393 35-343 (347)
5 2a0u_A Initiation factor 2B; S 100.0 2.5E-66 8.6E-71 520.4 27.8 307 6-397 46-378 (383)
6 3ecs_A Translation initiation 100.0 3.2E-66 1.1E-70 507.6 25.2 302 6-395 5-307 (315)
7 1vb5_A Translation initiation 100.0 1.2E-63 4.2E-68 483.7 26.1 274 4-386 2-275 (276)
8 1w2w_B 5-methylthioribose-1-ph 100.0 1.5E-47 5E-52 351.3 6.1 163 223-386 2-183 (191)
9 1w2w_A 5-methylthioribose-1-ph 99.6 9.2E-15 3.1E-19 135.0 12.9 146 7-226 37-208 (211)
10 1uj6_A Ribose 5-phosphate isom 98.4 1.1E-06 3.8E-11 82.1 9.6 118 184-317 7-131 (227)
11 3kwm_A Ribose-5-phosphate isom 98.1 7.6E-06 2.6E-10 76.2 8.1 121 184-317 11-132 (224)
12 2f8m_A Ribose 5-phosphate isom 98.1 1.2E-05 4.1E-10 75.8 9.2 121 182-316 9-137 (244)
13 1m0s_A Ribose-5-phosphate isom 97.9 1.3E-05 4.5E-10 74.4 7.2 120 185-317 6-126 (219)
14 3hhe_A Ribose-5-phosphate isom 97.9 2.9E-05 9.8E-10 73.5 9.6 118 186-317 28-149 (255)
15 1lk5_A D-ribose-5-phosphate is 97.9 2.6E-05 9E-10 72.9 8.8 120 184-317 5-130 (229)
16 3l7o_A Ribose-5-phosphate isom 97.8 2.3E-05 7.8E-10 73.0 6.9 119 185-317 4-127 (225)
17 1o8b_A Ribose 5-phosphate isom 97.8 5.2E-06 1.8E-10 77.2 0.9 120 185-317 6-126 (219)
18 2pjm_A Ribose-5-phosphate isom 97.7 0.00011 3.7E-09 68.5 9.1 119 184-317 5-129 (226)
19 1xtz_A Ribose-5-phosphate isom 97.7 6.7E-05 2.3E-09 71.5 7.2 117 184-314 20-149 (264)
20 3uw1_A Ribose-5-phosphate isom 97.5 0.0002 6.8E-09 67.1 7.7 119 186-317 15-138 (239)
21 4gmk_A Ribose-5-phosphate isom 94.6 0.078 2.7E-06 49.1 7.6 117 185-317 7-130 (228)
22 3ixq_A Ribose-5-phosphate isom 91.0 0.9 3.1E-05 41.9 9.0 118 186-316 7-128 (226)
23 3e8x_A Putative NAD-dependent 87.0 1.2 4.1E-05 40.0 6.8 99 199-311 20-132 (236)
24 3i6i_A Putative leucoanthocyan 86.2 3.2 0.00011 39.4 9.8 102 200-308 10-118 (346)
25 1x92_A APC5045, phosphoheptose 85.1 11 0.00036 32.9 11.9 36 240-275 130-168 (199)
26 4dq6_A Putative pyridoxal phos 83.8 7.5 0.00026 36.9 11.1 114 186-306 73-202 (391)
27 2yva_A DNAA initiator-associat 83.7 14 0.00047 32.0 12.0 105 170-274 11-163 (196)
28 1vim_A Hypothetical protein AF 83.7 7.9 0.00027 34.1 10.5 107 165-274 15-140 (200)
29 1m3s_A Hypothetical protein YC 83.0 7.5 0.00026 33.5 9.9 85 190-274 27-130 (186)
30 2nvv_A Acetyl-COA hydrolase/tr 82.9 17 0.00058 37.3 13.9 121 190-316 8-165 (506)
31 2g39_A Acetyl-COA hydrolase; c 82.6 22 0.00074 36.4 14.5 118 191-317 19-171 (497)
32 3ic5_A Putative saccharopine d 82.4 15 0.00051 28.3 11.2 97 200-312 5-104 (118)
33 4gx0_A TRKA domain protein; me 82.0 2.1 7.1E-05 44.2 6.7 106 192-308 315-440 (565)
34 3s3t_A Nucleotide-binding prot 81.8 19 0.00064 29.0 11.6 60 244-307 76-145 (146)
35 3sho_A Transcriptional regulat 81.0 13 0.00044 31.9 10.6 86 190-275 29-139 (187)
36 1jeo_A MJ1247, hypothetical pr 80.3 12 0.00042 31.9 10.2 104 168-275 11-133 (180)
37 3rrl_A Succinyl-COA:3-ketoacid 80.1 5.7 0.00019 36.7 8.3 120 191-316 12-198 (235)
38 1kmj_A Selenocysteine lyase; p 79.7 41 0.0014 31.6 15.0 110 192-306 75-199 (406)
39 3ruf_A WBGU; rossmann fold, UD 78.8 9.8 0.00034 35.8 9.9 110 199-310 24-151 (351)
40 3g0t_A Putative aminotransfera 78.0 11 0.00037 36.5 10.2 118 184-306 86-220 (437)
41 3hgm_A Universal stress protei 77.4 20 0.0007 28.7 10.3 61 243-307 76-147 (147)
42 1t3i_A Probable cysteine desul 76.3 53 0.0018 31.1 15.7 110 192-306 80-204 (420)
43 3h14_A Aminotransferase, class 76.2 22 0.00074 33.8 11.6 117 183-306 71-199 (391)
44 3dqp_A Oxidoreductase YLBE; al 76.1 5.2 0.00018 35.2 6.6 101 202-310 2-106 (219)
45 2ord_A Acoat, acetylornithine 75.8 20 0.0007 34.1 11.4 131 165-306 59-222 (397)
46 3kax_A Aminotransferase, class 75.6 14 0.00048 34.8 10.0 115 185-306 64-194 (383)
47 2bfw_A GLGA glycogen synthase; 74.4 14 0.00049 31.3 8.9 100 197-307 33-145 (200)
48 3dzz_A Putative pyridoxal 5'-p 73.7 25 0.00086 33.1 11.3 115 185-306 67-198 (391)
49 1qz9_A Kynureninase; kynurenin 73.5 19 0.00066 34.4 10.6 101 200-306 89-200 (416)
50 3fxa_A SIS domain protein; str 73.5 16 0.00054 31.8 9.1 36 240-275 109-144 (201)
51 3idf_A USP-like protein; unive 73.3 9.8 0.00033 30.5 7.2 61 243-307 72-137 (138)
52 1wv2_A Thiazole moeity, thiazo 73.1 12 0.00042 35.0 8.4 113 192-309 64-195 (265)
53 1k6d_A Acetate COA-transferase 73.0 13 0.00043 33.8 8.5 43 267-315 148-194 (220)
54 1qyd_A Pinoresinol-lariciresin 72.6 9.7 0.00033 35.2 7.9 103 200-307 4-114 (313)
55 3etn_A Putative phosphosugar i 72.6 12 0.00041 33.5 8.2 108 165-275 22-160 (220)
56 1jw9_B Molybdopterin biosynthe 72.3 17 0.00059 33.3 9.4 107 191-308 23-153 (249)
57 1tk9_A Phosphoheptose isomeras 72.0 28 0.00096 29.6 10.3 35 240-274 127-161 (188)
58 2e7j_A SEP-tRNA:Cys-tRNA synth 71.7 34 0.0012 31.9 11.7 103 194-306 64-182 (371)
59 3trj_A Phosphoheptose isomeras 71.6 33 0.0011 30.1 10.8 34 240-273 131-167 (201)
60 3npg_A Uncharacterized DUF364 71.4 3.3 0.00011 38.6 4.1 124 168-318 82-207 (249)
61 2xhz_A KDSD, YRBH, arabinose 5 71.2 20 0.00068 30.5 9.1 36 240-275 113-148 (183)
62 2r6j_A Eugenol synthase 1; phe 70.1 11 0.00038 35.0 7.7 96 202-307 13-113 (318)
63 2gas_A Isoflavone reductase; N 69.6 10 0.00034 35.0 7.2 99 200-307 2-110 (307)
64 2zc0_A Alanine glyoxylate tran 69.5 47 0.0016 31.5 12.3 129 165-306 52-213 (407)
65 2gm3_A Unknown protein; AT3G01 68.3 18 0.00062 30.3 8.1 49 267-319 124-173 (175)
66 3lvm_A Cysteine desulfurase; s 68.3 67 0.0023 30.5 13.2 102 200-306 86-198 (423)
67 2w48_A Sorbitol operon regulat 68.2 8.7 0.0003 36.5 6.5 89 187-276 93-213 (315)
68 1qyc_A Phenylcoumaran benzylic 67.6 11 0.00037 34.7 6.9 99 200-307 4-111 (308)
69 3dfz_A SIRC, precorrin-2 dehyd 67.6 4.2 0.00015 37.2 4.0 92 199-307 30-121 (223)
70 3qhx_A Cystathionine gamma-syn 67.3 22 0.00076 34.3 9.5 99 200-306 82-186 (392)
71 3dlo_A Universal stress protei 67.0 52 0.0018 27.1 12.9 102 202-307 27-154 (155)
72 2z61_A Probable aspartate amin 66.8 41 0.0014 31.5 11.1 98 198-306 88-188 (370)
73 2z08_A Universal stress protei 66.6 45 0.0015 26.4 9.9 37 267-307 99-136 (137)
74 3llv_A Exopolyphosphatase-rela 66.6 27 0.00091 28.2 8.5 90 200-306 6-100 (141)
75 1vp4_A Aminotransferase, putat 66.5 49 0.0017 31.9 11.9 136 165-306 61-226 (425)
76 1svv_A Threonine aldolase; str 66.5 18 0.0006 33.6 8.3 102 199-306 66-182 (359)
77 2h1q_A Hypothetical protein; Z 66.4 8.5 0.00029 36.3 5.9 89 198-316 139-227 (270)
78 3cdk_A Succinyl-COA:3-ketoacid 65.9 32 0.0011 31.6 9.7 44 267-316 151-198 (241)
79 3ezs_A Aminotransferase ASPB; 65.8 44 0.0015 31.3 11.1 104 198-306 81-192 (376)
80 1vjo_A Alanine--glyoxylate ami 65.6 27 0.00093 33.0 9.6 98 201-306 87-194 (393)
81 1qgn_A Protein (cystathionine 65.3 42 0.0014 33.4 11.2 98 201-306 131-235 (445)
82 2jl1_A Triphenylmethane reduct 65.1 21 0.0007 32.4 8.3 102 202-310 2-107 (287)
83 4ffc_A 4-aminobutyrate aminotr 65.0 25 0.00085 34.7 9.4 139 165-306 83-264 (453)
84 1o1y_A Conserved hypothetical 64.8 6.7 0.00023 35.9 4.8 90 224-313 11-105 (239)
85 3frk_A QDTB; aminotransferase, 64.5 22 0.00076 33.5 8.7 103 193-306 45-156 (373)
86 3nyt_A Aminotransferase WBPE; 64.5 57 0.0019 30.6 11.6 100 192-306 43-155 (367)
87 2yv1_A Succinyl-COA ligase [AD 64.5 5.5 0.00019 37.8 4.3 106 199-306 70-179 (294)
88 2gn4_A FLAA1 protein, UDP-GLCN 64.4 18 0.0006 34.5 7.9 111 199-312 20-144 (344)
89 2wm3_A NMRA-like family domain 64.0 19 0.00066 33.0 7.9 108 200-311 5-116 (299)
90 1yaa_A Aspartate aminotransfer 63.9 49 0.0017 31.5 11.2 102 199-306 96-214 (412)
91 2ctz_A O-acetyl-L-homoserine s 63.9 36 0.0012 33.1 10.4 99 201-306 75-179 (421)
92 3c1o_A Eugenol synthase; pheny 63.7 19 0.00067 33.3 8.0 98 201-307 5-111 (321)
93 2lpm_A Two-component response 63.6 13 0.00045 30.4 5.9 78 223-309 6-87 (123)
94 3dyd_A Tyrosine aminotransfera 63.3 39 0.0013 32.8 10.4 136 165-306 74-229 (427)
95 2i2w_A Phosphoheptose isomeras 63.2 59 0.002 28.5 10.7 34 240-273 148-181 (212)
96 4egb_A DTDP-glucose 4,6-dehydr 63.1 17 0.00057 34.1 7.4 112 199-310 23-149 (346)
97 3fdb_A Beta C-S lyase, putativ 63.1 30 0.001 32.4 9.3 103 197-306 79-188 (377)
98 1eg5_A Aminotransferase; PLP-d 63.0 96 0.0033 28.7 15.1 102 200-306 62-176 (384)
99 3l5o_A Uncharacterized protein 63.0 9 0.00031 36.1 5.3 88 199-316 140-227 (270)
100 3l8a_A METC, putative aminotra 62.9 72 0.0025 30.6 12.2 135 165-306 77-232 (421)
101 1mjh_A Protein (ATP-binding do 62.5 25 0.00086 28.8 7.7 60 245-308 91-158 (162)
102 2dum_A Hypothetical protein PH 62.4 17 0.00057 30.3 6.6 61 244-308 85-155 (170)
103 4adb_A Succinylornithine trans 61.8 81 0.0028 29.7 12.3 137 165-306 58-222 (406)
104 3enk_A UDP-glucose 4-epimerase 61.8 37 0.0013 31.5 9.6 110 199-310 4-129 (341)
105 3m2p_A UDP-N-acetylglucosamine 61.8 25 0.00085 32.4 8.3 100 201-310 3-109 (311)
106 3uwc_A Nucleotide-sugar aminot 61.8 15 0.00053 34.5 6.9 99 192-306 46-157 (374)
107 3mad_A Sphingosine-1-phosphate 61.7 29 0.001 34.7 9.4 99 203-308 164-276 (514)
108 3jtx_A Aminotransferase; NP_28 61.4 25 0.00084 33.4 8.4 103 199-306 90-206 (396)
109 1bs0_A Protein (8-amino-7-oxon 61.4 1.1E+02 0.0036 28.7 13.4 129 165-306 56-203 (384)
110 3vax_A Putative uncharacterize 61.2 1.1E+02 0.0037 28.7 13.4 113 188-306 67-194 (400)
111 2zyj_A Alpha-aminodipate amino 61.1 66 0.0023 30.4 11.5 134 165-306 50-201 (397)
112 3isl_A Purine catabolism prote 60.8 1.1E+02 0.0038 28.7 13.7 95 204-306 67-171 (416)
113 2huf_A Alanine glyoxylate amin 60.8 43 0.0015 31.5 10.0 98 201-306 72-179 (393)
114 1oi7_A Succinyl-COA synthetase 60.7 6.1 0.00021 37.4 3.8 106 199-306 64-173 (288)
115 2rfv_A Methionine gamma-lyase; 60.7 66 0.0023 30.7 11.4 98 201-306 81-184 (398)
116 1sb8_A WBPP; epimerase, 4-epim 60.5 34 0.0012 32.0 9.2 110 199-310 26-153 (352)
117 3f9t_A TDC, L-tyrosine decarbo 60.4 95 0.0032 28.8 12.3 100 199-306 86-206 (397)
118 1lc5_A COBD, L-threonine-O-3-p 60.3 53 0.0018 30.7 10.5 98 200-306 77-184 (364)
119 1n8p_A Cystathionine gamma-lya 60.2 31 0.0011 33.4 9.0 98 201-306 72-177 (393)
120 3c85_A Putative glutathione-re 60.0 37 0.0013 28.8 8.5 86 200-301 39-130 (183)
121 3ftb_A Histidinol-phosphate am 60.0 32 0.0011 32.0 8.8 97 199-306 78-182 (361)
122 3cvj_A Putative phosphoheptose 60.0 66 0.0023 28.8 10.7 35 239-273 124-169 (243)
123 2bkw_A Alanine-glyoxylate amin 59.9 80 0.0027 29.3 11.7 101 200-306 60-174 (385)
124 2yvq_A Carbamoyl-phosphate syn 59.7 46 0.0016 27.8 8.8 92 199-306 25-130 (143)
125 3dxv_A Alpha-amino-epsilon-cap 59.7 13 0.00045 36.2 6.2 140 165-306 62-240 (439)
126 4id9_A Short-chain dehydrogena 59.7 16 0.00056 34.2 6.7 100 199-310 18-126 (347)
127 3e48_A Putative nucleoside-dip 59.6 12 0.00041 34.2 5.5 104 202-312 2-108 (289)
128 2hj0_A Putative citrate lyase, 59.4 77 0.0026 32.5 12.1 115 186-311 253-417 (519)
129 3kgw_A Alanine-glyoxylate amin 59.4 70 0.0024 29.8 11.2 97 202-306 77-183 (393)
130 3ndn_A O-succinylhomoserine su 59.2 48 0.0016 32.4 10.2 99 200-306 97-201 (414)
131 4ds3_A Phosphoribosylglycinami 59.2 27 0.00093 31.4 7.7 71 202-275 11-94 (209)
132 2q7w_A Aspartate aminotransfer 59.2 73 0.0025 30.0 11.4 104 199-306 92-210 (396)
133 3l9w_A Glutathione-regulated p 58.9 19 0.00066 35.7 7.3 93 200-309 4-103 (413)
134 1nri_A Hypothetical protein HI 58.7 98 0.0033 29.0 12.0 64 228-293 143-211 (306)
135 2cb1_A O-acetyl homoserine sul 58.6 47 0.0016 32.0 10.0 102 196-306 68-175 (412)
136 1fmc_A 7 alpha-hydroxysteroid 58.5 63 0.0022 28.5 10.2 109 199-310 10-146 (255)
137 3i4j_A Aminotransferase, class 58.4 29 0.00098 33.6 8.4 140 165-306 48-230 (430)
138 3eag_A UDP-N-acetylmuramate:L- 58.2 30 0.001 32.9 8.3 67 224-305 27-94 (326)
139 3ab8_A Putative uncharacterize 58.2 51 0.0017 29.5 9.6 98 203-307 158-267 (268)
140 3tqx_A 2-amino-3-ketobutyrate 58.2 80 0.0027 29.6 11.4 102 195-306 99-210 (399)
141 3s2u_A UDP-N-acetylglucosamine 57.6 70 0.0024 30.5 11.0 93 199-307 179-278 (365)
142 1xr4_A Putative citrate lyase 57.2 68 0.0023 32.8 11.2 124 190-315 49-209 (509)
143 3a2b_A Serine palmitoyltransfe 57.2 1.3E+02 0.0044 28.3 14.1 111 187-306 91-208 (398)
144 3osu_A 3-oxoacyl-[acyl-carrier 57.2 18 0.00062 32.4 6.2 108 199-308 3-139 (246)
145 3loq_A Universal stress protei 57.0 99 0.0034 28.0 11.5 103 202-308 173-289 (294)
146 2zcu_A Uncharacterized oxidore 57.0 30 0.001 31.2 7.8 99 203-310 2-104 (286)
147 3dhn_A NAD-dependent epimerase 56.6 29 0.00098 30.2 7.4 101 201-310 5-112 (227)
148 1c7n_A Cystalysin; transferase 56.6 62 0.0021 30.6 10.4 116 184-306 70-202 (399)
149 2ay1_A Aroat, aromatic amino a 56.6 68 0.0023 30.2 10.6 103 198-306 88-207 (394)
150 3ke3_A Putative serine-pyruvat 56.6 1.2E+02 0.0042 28.5 12.5 100 201-307 53-174 (379)
151 2fr1_A Erythromycin synthase, 56.5 50 0.0017 33.3 10.1 112 197-310 223-361 (486)
152 4eb5_A Probable cysteine desul 56.4 1.3E+02 0.0043 27.9 13.9 96 201-303 62-170 (382)
153 3tqr_A Phosphoribosylglycinami 56.3 39 0.0013 30.5 8.2 69 203-275 10-91 (215)
154 3acz_A Methionine gamma-lyase; 55.6 42 0.0014 32.2 9.0 97 201-306 76-179 (389)
155 3h2s_A Putative NADH-flavin re 55.6 28 0.00095 30.1 7.1 100 202-309 2-105 (224)
156 1z7d_A Ornithine aminotransfer 55.6 1.1E+02 0.0036 29.8 12.1 109 195-306 118-251 (433)
157 2hj0_A Putative citrate lyase, 55.3 65 0.0022 33.1 10.7 122 191-315 53-212 (519)
158 4dik_A Flavoprotein; TM0755, e 55.2 1.6E+02 0.0055 28.9 15.0 143 169-314 200-364 (410)
159 4f4e_A Aromatic-amino-acid ami 55.2 77 0.0026 30.4 10.9 100 201-306 119-233 (420)
160 2o0r_A RV0858C (N-succinyldiam 55.2 70 0.0024 30.5 10.6 110 183-306 65-198 (411)
161 2ch1_A 3-hydroxykynurenine tra 55.2 48 0.0016 31.2 9.3 98 201-306 71-178 (396)
162 3rft_A Uronate dehydrogenase; 55.0 22 0.00075 32.3 6.5 99 200-310 3-111 (267)
163 3nbm_A PTS system, lactose-spe 54.9 15 0.00052 29.5 4.7 53 246-307 30-84 (108)
164 1j32_A Aspartate aminotransfer 54.4 52 0.0018 31.0 9.4 102 198-306 89-201 (388)
165 3ly1_A Putative histidinol-pho 54.3 46 0.0016 30.8 8.9 98 199-306 68-178 (354)
166 2bwn_A 5-aminolevulinate synth 54.3 1.4E+02 0.0049 28.0 15.5 105 195-306 102-213 (401)
167 3mt0_A Uncharacterized protein 54.2 1.3E+02 0.0043 27.3 13.1 97 211-313 23-132 (290)
168 2pb2_A Acetylornithine/succiny 54.0 1.5E+02 0.0051 28.5 12.8 115 188-306 103-240 (420)
169 2dou_A Probable N-succinyldiam 53.7 59 0.002 30.5 9.6 99 201-306 89-196 (376)
170 2xbl_A Phosphoheptose isomeras 53.4 1E+02 0.0036 26.1 11.6 35 240-274 133-167 (198)
171 1elu_A L-cysteine/L-cystine C- 53.2 1.4E+02 0.0049 27.6 14.1 100 200-306 77-193 (390)
172 2yrr_A Aminotransferase, class 53.2 46 0.0016 30.5 8.6 96 201-306 54-159 (353)
173 3ele_A Amino transferase; RER0 53.2 82 0.0028 29.6 10.6 118 183-306 79-216 (398)
174 3rht_A (gatase1)-like protein; 53.2 11 0.00038 35.2 4.1 80 227-313 6-91 (259)
175 4dmm_A 3-oxoacyl-[acyl-carrier 53.2 70 0.0024 29.0 9.7 97 199-297 27-148 (269)
176 3ilh_A Two component response 52.7 66 0.0023 25.1 8.5 58 202-259 37-101 (146)
177 1ajs_A Aspartate aminotransfer 52.5 86 0.003 29.7 10.7 104 199-306 97-221 (412)
178 3fsl_A Aromatic-amino-acid ami 52.5 1.4E+02 0.0048 27.9 12.2 100 201-306 97-211 (397)
179 1zud_1 Adenylyltransferase THI 52.5 71 0.0024 29.1 9.6 109 189-308 18-150 (251)
180 1e5e_A MGL, methionine gamma-l 52.4 1.2E+02 0.0042 29.0 11.9 99 201-306 79-183 (404)
181 2dr1_A PH1308 protein, 386AA l 52.4 1.5E+02 0.005 27.5 14.0 97 202-306 74-181 (386)
182 4gud_A Imidazole glycerol phos 52.3 34 0.0012 29.9 7.2 75 227-313 4-84 (211)
183 3lk7_A UDP-N-acetylmuramoylala 52.2 29 0.001 34.5 7.4 71 200-275 9-80 (451)
184 3zrp_A Serine-pyruvate aminotr 52.0 64 0.0022 30.0 9.5 98 201-306 56-162 (384)
185 1g0o_A Trihydroxynaphthalene r 52.0 29 0.00098 31.8 6.8 99 199-300 28-152 (283)
186 1u08_A Hypothetical aminotrans 51.9 1.5E+02 0.0052 27.6 13.0 110 183-306 70-201 (386)
187 1fc4_A 2-amino-3-ketobutyrate 51.9 1.3E+02 0.0045 28.2 11.8 110 183-306 93-212 (401)
188 3cwc_A Putative glycerate kina 51.7 8.7 0.0003 38.1 3.2 50 261-312 281-330 (383)
189 2fq6_A Cystathionine beta-lyas 51.7 34 0.0012 33.6 7.7 99 201-306 99-204 (415)
190 2g1u_A Hypothetical protein TM 51.5 57 0.0019 26.8 8.1 93 198-307 17-116 (155)
191 3kcq_A Phosphoribosylglycinami 51.5 32 0.0011 31.1 6.8 70 202-275 12-90 (215)
192 3rsc_A CALG2; TDP, enediyne, s 51.3 37 0.0013 32.5 7.8 23 292-314 131-153 (415)
193 3ri6_A O-acetylhomoserine sulf 51.0 1E+02 0.0036 30.2 11.2 98 201-306 99-202 (430)
194 2yv2_A Succinyl-COA synthetase 50.8 9.6 0.00033 36.2 3.4 105 200-306 72-180 (297)
195 3oy2_A Glycosyltransferase B73 50.7 42 0.0014 31.9 8.1 97 200-306 184-302 (413)
196 2oga_A Transaminase; PLP-depen 50.7 1.3E+02 0.0046 28.4 11.8 104 191-306 70-183 (399)
197 2rjn_A Response regulator rece 50.6 58 0.002 26.0 7.9 79 224-310 6-88 (154)
198 1e6u_A GDP-fucose synthetase; 50.2 36 0.0012 31.2 7.3 92 201-310 4-107 (321)
199 1orr_A CDP-tyvelose-2-epimeras 50.1 43 0.0015 31.0 7.9 105 202-308 3-124 (347)
200 1tq8_A Hypothetical protein RV 49.9 1.1E+02 0.0037 25.3 10.2 62 243-308 87-157 (163)
201 1hdo_A Biliverdin IX beta redu 49.9 37 0.0013 28.6 6.9 104 201-311 4-112 (206)
202 1edo_A Beta-keto acyl carrier 49.8 65 0.0022 28.2 8.7 109 200-310 1-138 (244)
203 3ip3_A Oxidoreductase, putativ 49.7 35 0.0012 32.3 7.2 53 223-275 22-75 (337)
204 1v2d_A Glutamine aminotransfer 49.7 1.5E+02 0.0051 27.6 11.8 93 200-306 79-190 (381)
205 2z9v_A Aspartate aminotransfer 49.6 1.2E+02 0.004 28.4 11.0 99 200-306 60-169 (392)
206 3cis_A Uncharacterized protein 49.6 1.5E+02 0.0052 26.9 11.6 59 250-312 100-164 (309)
207 1lss_A TRK system potassium up 49.6 70 0.0024 25.1 8.2 89 201-305 5-98 (140)
208 2nu8_A Succinyl-COA ligase [AD 49.6 9.9 0.00034 35.9 3.2 105 199-305 64-172 (288)
209 3oks_A 4-aminobutyrate transam 49.5 1.1E+02 0.0038 29.8 11.2 116 188-306 108-266 (451)
210 2o8r_A Polyphosphate kinase; s 49.4 28 0.00095 37.3 6.9 50 207-256 381-432 (705)
211 3ew7_A LMO0794 protein; Q8Y8U8 49.2 43 0.0015 28.7 7.2 99 202-310 2-103 (221)
212 1v4v_A UDP-N-acetylglucosamine 49.2 1E+02 0.0036 28.6 10.5 70 222-307 227-299 (376)
213 3gpi_A NAD-dependent epimerase 49.1 12 0.00041 34.1 3.7 48 263-310 58-109 (286)
214 3nra_A Aspartate aminotransfer 48.9 47 0.0016 31.4 8.1 115 185-306 83-217 (407)
215 3hdj_A Probable ornithine cycl 48.9 65 0.0022 30.5 8.9 78 192-275 111-191 (313)
216 3nmy_A Xometc, cystathionine g 48.9 43 0.0015 32.6 7.9 97 201-306 84-187 (400)
217 1qkk_A DCTD, C4-dicarboxylate 48.5 63 0.0022 25.8 7.8 78 225-310 3-84 (155)
218 1vl0_A DTDP-4-dehydrorhamnose 48.5 29 0.00099 31.5 6.2 92 200-310 12-114 (292)
219 3l4e_A Uncharacterized peptida 48.4 23 0.00078 31.7 5.3 107 203-309 5-121 (206)
220 1cs1_A CGS, protein (cystathio 48.4 1.8E+02 0.0061 27.3 12.3 98 201-306 69-172 (386)
221 3d3u_A 4-hydroxybutyrate COA-t 48.3 1.4E+02 0.0049 29.5 11.8 152 184-380 194-396 (439)
222 3ezl_A Acetoacetyl-COA reducta 48.3 1.4E+02 0.0049 26.3 10.9 109 199-309 12-149 (256)
223 3ijr_A Oxidoreductase, short c 48.2 1.2E+02 0.0042 27.7 10.7 100 199-300 46-171 (291)
224 3st7_A Capsular polysaccharide 48.2 40 0.0014 31.9 7.4 68 236-303 10-86 (369)
225 3gju_A Putative aminotransfera 48.1 1.6E+02 0.0054 28.7 12.1 140 165-306 70-260 (460)
226 1gy8_A UDP-galactose 4-epimera 48.1 49 0.0017 31.5 8.0 111 200-310 2-144 (397)
227 1m32_A 2-aminoethylphosphonate 48.0 76 0.0026 29.1 9.2 99 201-306 58-166 (366)
228 1ek6_A UDP-galactose 4-epimera 47.6 40 0.0014 31.4 7.2 102 201-310 3-132 (348)
229 1gc0_A Methionine gamma-lyase; 47.6 84 0.0029 30.0 9.8 98 200-306 81-185 (398)
230 3edm_A Short chain dehydrogena 47.5 66 0.0023 28.9 8.5 102 199-301 7-133 (259)
231 3gt7_A Sensor protein; structu 47.4 80 0.0027 25.3 8.3 79 224-310 6-90 (154)
232 3ia7_A CALG4; glycosysltransfe 47.4 56 0.0019 30.8 8.3 22 292-313 115-136 (402)
233 1jkx_A GART;, phosphoribosylgl 47.3 67 0.0023 28.7 8.3 70 202-275 4-87 (212)
234 1xq6_A Unknown protein; struct 47.3 44 0.0015 29.2 7.1 106 199-310 3-133 (253)
235 1yiz_A Kynurenine aminotransfe 47.2 1E+02 0.0035 29.5 10.3 51 201-257 103-153 (429)
236 3i5t_A Aminotransferase; pyrid 47.1 74 0.0025 31.6 9.5 140 165-306 73-260 (476)
237 2z5l_A Tylkr1, tylactone synth 47.1 73 0.0025 32.4 9.5 112 197-310 256-391 (511)
238 4e3z_A Putative oxidoreductase 47.0 93 0.0032 28.0 9.5 101 198-299 24-149 (272)
239 3la8_A SMU.1229, putative puri 46.9 62 0.0021 30.8 8.3 70 208-309 192-264 (303)
240 3nnk_A Ureidoglycine-glyoxylat 46.9 1.5E+02 0.0051 27.8 11.3 97 202-306 67-173 (411)
241 3u9l_A 3-oxoacyl-[acyl-carrier 46.8 63 0.0022 30.5 8.5 108 199-308 4-144 (324)
242 2x5d_A Probable aminotransfera 46.7 80 0.0027 30.1 9.4 100 200-306 100-210 (412)
243 2o1b_A Aminotransferase, class 46.7 1E+02 0.0034 29.4 10.1 100 200-306 110-219 (404)
244 4dqv_A Probable peptide synthe 46.7 24 0.00084 35.2 5.8 112 198-310 71-214 (478)
245 2zay_A Response regulator rece 46.6 57 0.0019 25.7 7.1 80 223-310 6-91 (147)
246 1ka9_H Imidazole glycerol phos 46.6 53 0.0018 28.5 7.4 78 227-314 4-88 (200)
247 4e4t_A Phosphoribosylaminoimid 46.6 18 0.00062 35.8 4.7 77 196-278 31-107 (419)
248 1y8q_A Ubiquitin-like 1 activa 46.6 2E+02 0.0069 27.4 13.5 108 189-307 26-156 (346)
249 2x4g_A Nucleoside-diphosphate- 46.6 40 0.0014 31.2 7.0 103 201-310 14-126 (342)
250 3cog_A Cystathionine gamma-lya 46.5 69 0.0023 31.0 9.0 98 201-306 84-187 (403)
251 2a9v_A GMP synthase; structura 46.5 26 0.00088 31.2 5.4 84 225-312 13-96 (212)
252 4a6r_A Omega transaminase; tra 46.3 1.8E+02 0.0063 28.2 12.2 140 165-306 69-258 (459)
253 3nx3_A Acoat, acetylornithine 46.3 1.7E+02 0.0058 27.4 11.7 139 165-306 55-218 (395)
254 3oid_A Enoyl-[acyl-carrier-pro 46.2 29 0.00099 31.4 5.8 107 199-307 3-138 (258)
255 1bw0_A TAT, protein (tyrosine 45.9 1.2E+02 0.0043 28.6 10.7 103 198-306 103-215 (416)
256 1d2f_A MALY protein; aminotran 45.7 1.4E+02 0.0046 28.0 10.8 101 199-306 87-200 (390)
257 2fp4_A Succinyl-COA ligase [GD 45.6 15 0.00053 34.9 3.9 106 199-306 71-181 (305)
258 3tcm_A Alanine aminotransferas 45.6 1.3E+02 0.0044 30.0 11.0 104 197-306 155-275 (500)
259 4hvk_A Probable cysteine desul 45.4 1.8E+02 0.0062 26.6 14.5 98 201-306 62-172 (382)
260 2hq1_A Glucose/ribitol dehydro 45.3 86 0.0029 27.4 8.8 75 199-275 4-91 (247)
261 1pff_A Methionine gamma-lyase; 45.2 81 0.0028 28.9 8.9 99 200-306 14-119 (331)
262 2okj_A Glutamate decarboxylase 45.2 1.9E+02 0.0066 28.5 12.3 103 199-306 151-280 (504)
263 3sc4_A Short chain dehydrogena 45.2 1.7E+02 0.0057 26.6 11.0 108 199-308 8-150 (285)
264 1gd9_A Aspartate aminotransfer 45.0 1.3E+02 0.0045 28.1 10.6 102 198-306 85-198 (389)
265 2rhc_B Actinorhodin polyketide 44.8 1E+02 0.0035 27.9 9.4 98 199-300 21-144 (277)
266 3orq_A N5-carboxyaminoimidazol 44.7 65 0.0022 31.0 8.4 72 197-278 9-84 (377)
267 2j48_A Two-component sensor ki 44.7 71 0.0024 23.5 7.1 76 227-310 3-84 (119)
268 3f6p_A Transcriptional regulat 44.6 88 0.003 23.8 7.8 76 227-310 4-82 (120)
269 3is3_A 17BETA-hydroxysteroid d 44.4 37 0.0013 30.8 6.3 101 199-301 17-142 (270)
270 2hmt_A YUAA protein; RCK, KTN, 44.4 77 0.0026 24.9 7.6 91 200-306 6-101 (144)
271 3mc6_A Sphingosine-1-phosphate 44.4 1.4E+02 0.0047 29.4 11.0 113 187-306 110-241 (497)
272 3qli_A Coenzyme A transferase; 44.4 38 0.0013 34.3 6.7 96 190-286 29-159 (455)
273 3qp9_A Type I polyketide synth 44.2 43 0.0015 34.2 7.2 112 196-310 247-402 (525)
274 3hn7_A UDP-N-acetylmuramate-L- 44.0 47 0.0016 33.8 7.6 92 199-306 18-109 (524)
275 2aef_A Calcium-gated potassium 44.0 34 0.0012 30.3 5.8 92 200-310 9-107 (234)
276 3fro_A GLGA glycogen synthase; 43.9 1.1E+02 0.0037 28.9 9.8 99 198-307 249-360 (439)
277 2dgk_A GAD-beta, GADB, glutama 43.9 2.1E+02 0.0073 27.6 12.2 97 202-306 106-228 (452)
278 2iss_D Glutamine amidotransfer 43.7 32 0.0011 30.3 5.5 79 223-313 18-103 (208)
279 3cai_A Possible aminotransfera 43.6 2.1E+02 0.0071 26.8 14.6 102 200-306 87-200 (406)
280 2ahu_A Putative enzyme YDIF; C 43.6 1.7E+02 0.0058 30.0 11.6 43 267-309 180-227 (531)
281 3beo_A UDP-N-acetylglucosamine 43.5 1.1E+02 0.0038 28.3 9.7 69 223-307 236-307 (375)
282 1y1p_A ARII, aldehyde reductas 43.5 45 0.0015 30.7 6.8 110 198-310 9-132 (342)
283 2ydy_A Methionine adenosyltran 43.5 51 0.0017 30.2 7.1 100 200-310 2-111 (315)
284 4e77_A Glutamate-1-semialdehyd 43.4 48 0.0016 32.0 7.3 140 165-306 72-239 (429)
285 2pln_A HP1043, response regula 43.4 1.1E+02 0.0037 23.7 8.3 76 223-310 16-95 (137)
286 1i4n_A Indole-3-glycerol phosp 43.3 17 0.00058 33.8 3.6 99 274-391 123-223 (251)
287 1wl8_A GMP synthase [glutamine 43.3 82 0.0028 26.9 8.1 76 228-310 3-81 (189)
288 3fwz_A Inner membrane protein 42.8 68 0.0023 25.9 7.1 97 200-308 7-103 (140)
289 1xq1_A Putative tropinone redu 42.7 86 0.0029 27.9 8.4 107 199-309 13-150 (266)
290 3h5i_A Response regulator/sens 42.5 1E+02 0.0035 24.0 8.1 79 225-310 5-87 (140)
291 3da8_A Probable 5'-phosphoribo 42.5 53 0.0018 29.6 6.8 69 203-275 17-97 (215)
292 3fdx_A Putative filament prote 42.4 1.2E+02 0.0042 23.7 10.5 36 267-307 106-142 (143)
293 1iay_A ACC synthase 2, 1-amino 42.2 1E+02 0.0036 29.4 9.5 103 197-306 106-226 (428)
294 3b46_A Aminotransferase BNA3; 42.1 84 0.0029 30.6 8.9 52 200-257 119-170 (447)
295 3if2_A Aminotransferase; YP_26 42.0 38 0.0013 32.8 6.2 122 183-306 86-244 (444)
296 3ec7_A Putative dehydrogenase; 41.9 2.3E+02 0.0078 26.8 12.5 111 202-316 25-153 (357)
297 3dr4_A Putative perosamine syn 41.9 1.2E+02 0.0042 28.4 9.8 96 195-306 67-176 (391)
298 3vps_A TUNA, NAD-dependent epi 41.9 22 0.00075 32.6 4.3 25 286-310 95-119 (321)
299 1rpn_A GDP-mannose 4,6-dehydra 41.8 37 0.0013 31.4 5.9 109 199-310 13-138 (335)
300 1zod_A DGD, 2,2-dialkylglycine 41.8 1.6E+02 0.0054 28.1 10.7 72 165-239 62-140 (433)
301 7aat_A Aspartate aminotransfer 41.8 1.3E+02 0.0045 28.2 10.1 97 199-306 94-213 (401)
302 3gk7_A 4-hydroxybutyrate COA-t 41.8 56 0.0019 32.9 7.5 97 190-286 14-134 (448)
303 3ffh_A Histidinol-phosphate am 41.7 67 0.0023 29.9 7.8 53 199-257 84-136 (363)
304 3rkr_A Short chain oxidoreduct 41.6 1.4E+02 0.0048 26.6 9.8 108 199-309 28-165 (262)
305 3i42_A Response regulator rece 41.6 81 0.0028 24.0 7.2 77 226-310 4-86 (127)
306 3ez1_A Aminotransferase MOCR f 41.3 90 0.0031 29.8 8.8 106 197-306 85-212 (423)
307 3oh8_A Nucleoside-diphosphate 41.1 62 0.0021 32.6 7.9 98 200-310 147-254 (516)
308 1ja9_A 4HNR, 1,3,6,8-tetrahydr 40.9 36 0.0012 30.5 5.5 99 199-300 20-144 (274)
309 1vef_A Acetylornithine/acetyl- 40.8 1.8E+02 0.0062 27.2 10.9 135 165-306 64-224 (395)
310 3e2y_A Kynurenine-oxoglutarate 40.8 94 0.0032 29.3 8.8 100 200-306 86-205 (410)
311 3eod_A Protein HNR; response r 40.8 1.2E+02 0.004 23.1 8.5 79 224-310 6-88 (130)
312 3i1j_A Oxidoreductase, short c 40.6 62 0.0021 28.5 7.0 108 199-309 13-153 (247)
313 3k5i_A Phosphoribosyl-aminoimi 40.5 24 0.00082 34.6 4.5 78 196-278 20-97 (403)
314 3q2o_A Phosphoribosylaminoimid 40.4 11 0.00037 36.6 2.0 76 196-277 10-85 (389)
315 1i1q_B Anthranilate synthase c 40.0 1.5E+02 0.0051 25.3 9.3 76 227-309 2-84 (192)
316 1pjq_A CYSG, siroheme synthase 40.0 55 0.0019 32.8 7.2 96 199-310 11-106 (457)
317 2cy8_A D-phgat, D-phenylglycin 39.8 69 0.0024 31.1 7.8 138 165-306 76-240 (453)
318 3hh1_A Tetrapyrrole methylase 39.7 61 0.0021 25.8 6.2 45 211-257 68-115 (117)
319 2gb3_A Aspartate aminotransfer 39.6 64 0.0022 30.8 7.4 98 199-306 102-212 (409)
320 4hv4_A UDP-N-acetylmuramate--L 39.5 52 0.0018 33.2 7.0 65 224-305 45-109 (494)
321 3ps9_A TRNA 5-methylaminomethy 39.5 39 0.0013 35.3 6.2 62 194-257 206-302 (676)
322 3g7q_A Valine-pyruvate aminotr 39.4 37 0.0012 32.4 5.6 121 184-306 79-218 (417)
323 1xgk_A Nitrogen metabolite rep 39.4 88 0.003 29.6 8.3 102 200-310 5-113 (352)
324 3grc_A Sensor protein, kinase; 39.4 1E+02 0.0036 23.8 7.6 78 225-310 6-89 (140)
325 2z1m_A GDP-D-mannose dehydrata 39.4 49 0.0017 30.5 6.3 105 200-309 3-126 (345)
326 3afn_B Carbonyl reductase; alp 39.3 1.1E+02 0.0039 26.7 8.6 77 199-276 6-94 (258)
327 3asa_A LL-diaminopimelate amin 39.0 95 0.0032 29.4 8.5 100 199-306 95-201 (400)
328 3slg_A PBGP3 protein; structur 38.7 51 0.0017 31.0 6.5 105 200-309 24-141 (372)
329 3sc6_A DTDP-4-dehydrorhamnose 38.7 32 0.0011 31.1 4.8 90 202-310 7-107 (287)
330 3u5t_A 3-oxoacyl-[acyl-carrier 38.7 30 0.001 31.6 4.6 98 199-299 26-149 (267)
331 3mz0_A Inositol 2-dehydrogenas 38.6 2.2E+02 0.0074 26.6 10.9 110 202-316 4-132 (344)
332 1qg8_A Protein (spore coat pol 38.6 82 0.0028 27.6 7.5 55 202-257 6-61 (255)
333 3nzo_A UDP-N-acetylglucosamine 38.5 2.7E+02 0.0093 26.6 12.1 112 199-311 34-166 (399)
334 3otg_A CALG1; calicheamicin, T 38.4 1E+02 0.0034 29.1 8.6 19 293-311 143-161 (412)
335 2q2v_A Beta-D-hydroxybutyrate 38.4 1.3E+02 0.0046 26.6 9.0 73 199-275 3-87 (255)
336 3gk3_A Acetoacetyl-COA reducta 38.2 1E+02 0.0035 27.7 8.3 97 199-297 24-145 (269)
337 2p5x_A ASMTL, N-acetylserotoni 38.2 75 0.0026 29.0 7.1 96 202-308 6-114 (230)
338 4da9_A Short-chain dehydrogena 38.1 99 0.0034 28.2 8.2 100 199-299 28-153 (280)
339 2qr3_A Two-component system re 38.0 85 0.0029 24.2 6.8 83 225-310 3-89 (140)
340 3qvo_A NMRA family protein; st 38.0 87 0.003 27.4 7.6 99 200-310 23-125 (236)
341 2oat_A Ornithine aminotransfer 38.0 2.4E+02 0.008 27.3 11.4 106 197-306 131-262 (439)
342 4ggj_A Mitochondrial cardiolip 38.0 35 0.0012 29.9 4.8 49 209-258 71-119 (196)
343 3e9k_A Kynureninase; kynurenin 38.0 2.4E+02 0.0084 27.2 11.6 102 199-306 128-249 (465)
344 3kkj_A Amine oxidase, flavin-c 37.9 18 0.0006 30.9 2.7 29 226-256 3-31 (336)
345 3cg4_A Response regulator rece 37.9 1.1E+02 0.0039 23.6 7.6 79 224-310 6-90 (142)
346 1vgv_A UDP-N-acetylglucosamine 37.8 1.1E+02 0.0036 28.6 8.6 70 222-307 235-307 (384)
347 3i16_A Aluminum resistance pro 37.8 96 0.0033 30.6 8.5 95 205-306 97-217 (427)
348 2b69_A UDP-glucuronate decarbo 37.7 24 0.0008 33.1 3.8 107 200-310 27-142 (343)
349 1db3_A GDP-mannose 4,6-dehydra 37.6 84 0.0029 29.4 7.8 108 201-310 2-132 (372)
350 2fnu_A Aminotransferase; prote 37.5 40 0.0014 31.4 5.4 99 196-306 44-153 (375)
351 3ot5_A UDP-N-acetylglucosamine 37.5 2.4E+02 0.0082 27.2 11.3 70 222-307 254-326 (403)
352 2xci_A KDO-transferase, 3-deox 37.5 1.1E+02 0.0037 29.2 8.7 75 222-306 222-307 (374)
353 1xi9_A Putative transaminase; 37.3 2.1E+02 0.0072 26.9 10.8 94 199-306 101-212 (406)
354 1mdo_A ARNB aminotransferase; 37.0 84 0.0029 29.5 7.7 102 193-306 48-159 (393)
355 3ua3_A Protein arginine N-meth 37.0 59 0.002 34.9 7.0 85 187-273 394-501 (745)
356 1o4s_A Aspartate aminotransfer 37.0 1.8E+02 0.0063 27.2 10.2 102 198-306 100-212 (389)
357 3olq_A Universal stress protei 36.9 2.4E+02 0.0082 25.5 11.5 65 241-309 232-305 (319)
358 3aow_A Putative uncharacterize 36.9 3E+02 0.01 26.6 13.7 129 165-306 94-255 (448)
359 3jzl_A Putative cystathionine 36.8 1.1E+02 0.0038 29.9 8.7 95 205-306 83-200 (409)
360 3rq1_A Aminotransferase class 36.7 2.3E+02 0.0077 26.8 10.9 100 201-306 104-224 (418)
361 2a8y_A 5'-methylthioadenosine 36.5 98 0.0034 28.6 7.9 22 288-309 190-211 (270)
362 3cnb_A DNA-binding response re 36.5 1.1E+02 0.0039 23.5 7.4 79 224-310 7-93 (143)
363 3ruy_A Ornithine aminotransfer 36.5 2.4E+02 0.0082 26.3 10.9 109 195-306 89-221 (392)
364 5nul_A Flavodoxin; electron tr 36.5 67 0.0023 25.7 6.0 66 241-308 18-86 (138)
365 2x5o_A UDP-N-acetylmuramoylala 36.4 32 0.0011 34.1 4.7 103 200-311 5-113 (439)
366 1id1_A Putative potassium chan 36.3 1.7E+02 0.0058 23.6 8.9 97 201-309 4-106 (153)
367 2qvg_A Two component response 36.2 1.1E+02 0.0036 23.8 7.2 79 224-310 6-98 (143)
368 4iin_A 3-ketoacyl-acyl carrier 36.1 97 0.0033 27.9 7.7 96 199-297 28-149 (271)
369 3fvs_A Kynurenine--oxoglutarat 36.1 65 0.0022 30.7 6.8 52 200-257 92-143 (422)
370 1wta_A 5'-methylthioadenosine 36.1 1E+02 0.0034 28.7 7.9 22 288-309 195-216 (275)
371 1vl8_A Gluconate 5-dehydrogena 36.0 1.6E+02 0.0055 26.4 9.2 108 199-310 20-158 (267)
372 3fxa_A SIS domain protein; str 36.0 1.7E+02 0.006 24.9 9.1 63 241-310 62-128 (201)
373 1jmv_A USPA, universal stress 36.0 1.5E+02 0.0053 23.1 9.4 60 243-308 70-137 (141)
374 2c81_A Glutamine-2-deoxy-scyll 35.9 1.6E+02 0.0056 27.9 9.7 107 189-306 47-162 (418)
375 3okp_A GDP-mannose-dependent a 35.7 94 0.0032 28.8 7.8 99 201-306 199-308 (394)
376 4g65_A TRK system potassium up 35.5 83 0.0028 31.5 7.7 109 195-307 204-331 (461)
377 1g2o_A Purine nucleoside phosp 35.5 63 0.0021 30.1 6.3 69 208-309 160-228 (268)
378 2epj_A Glutamate-1-semialdehyd 35.5 62 0.0021 31.2 6.6 139 165-306 75-242 (434)
379 1qe5_A Pentosyltransferase; en 35.5 63 0.0022 30.0 6.3 69 208-309 159-227 (266)
380 3vh1_A Ubiquitin-like modifier 35.4 2.4E+02 0.0082 29.4 11.2 98 200-307 327-463 (598)
381 3auf_A Glycinamide ribonucleot 35.4 1.3E+02 0.0044 27.2 8.3 70 203-275 27-109 (229)
382 2amh_A Septum formation protei 35.4 93 0.0032 27.8 7.2 97 206-309 15-125 (207)
383 3kvo_A Hydroxysteroid dehydrog 35.3 1.1E+02 0.0038 29.1 8.3 107 199-307 44-185 (346)
384 3jvi_A Protein tyrosine phosph 35.3 54 0.0018 27.9 5.4 71 206-276 15-92 (161)
385 1lnq_A MTHK channels, potassiu 35.3 55 0.0019 30.8 6.0 90 200-308 115-209 (336)
386 1eq2_A ADP-L-glycero-D-mannohe 35.2 1.4E+02 0.0047 26.9 8.7 103 203-309 2-116 (310)
387 1byr_A Protein (endonuclease); 35.1 92 0.0031 25.3 6.8 49 209-257 39-88 (155)
388 3awd_A GOX2181, putative polyo 35.1 1.9E+02 0.0066 25.2 9.5 108 199-309 12-149 (260)
389 3l44_A Glutamate-1-semialdehyd 35.0 84 0.0029 30.2 7.5 140 165-306 74-241 (434)
390 3hdv_A Response regulator; PSI 34.9 1.4E+02 0.0046 23.0 7.6 79 224-310 6-90 (136)
391 3f0h_A Aminotransferase; RER07 34.8 2.7E+02 0.0093 25.5 12.8 98 201-306 72-179 (376)
392 3sxp_A ADP-L-glycero-D-mannohe 34.8 38 0.0013 31.9 4.8 110 199-309 9-138 (362)
393 3jx9_A Putative phosphoheptose 34.7 81 0.0028 27.3 6.5 74 185-258 23-112 (170)
394 3v2g_A 3-oxoacyl-[acyl-carrier 34.6 1.1E+02 0.0039 27.6 7.9 100 199-300 30-154 (271)
395 1tcv_A Purine-nucleoside phosp 34.5 82 0.0028 29.6 7.0 70 208-309 168-242 (287)
396 3cg0_A Response regulator rece 34.4 91 0.0031 24.1 6.4 81 223-310 7-91 (140)
397 2c5a_A GDP-mannose-3', 5'-epim 34.4 59 0.002 30.9 6.2 104 200-310 29-145 (379)
398 2nv0_A Glutamine amidotransfer 34.3 52 0.0018 28.3 5.3 77 227-315 3-86 (196)
399 3t6k_A Response regulator rece 34.3 1.4E+02 0.0049 23.1 7.7 78 225-310 4-87 (136)
400 1qdl_B Protein (anthranilate s 34.2 2E+02 0.007 24.5 9.2 76 228-310 4-86 (195)
401 1gpw_B Amidotransferase HISH; 34.2 79 0.0027 27.3 6.5 76 227-313 2-89 (201)
402 2q1s_A Putative nucleotide sug 34.1 49 0.0017 31.4 5.5 106 199-310 31-151 (377)
403 1i24_A Sulfolipid biosynthesis 34.0 53 0.0018 31.2 5.8 112 196-310 7-155 (404)
404 3kto_A Response regulator rece 34.0 81 0.0028 24.5 6.1 80 225-310 6-89 (136)
405 2x6t_A ADP-L-glycero-D-manno-h 33.9 84 0.0029 29.3 7.1 106 200-309 46-163 (357)
406 3hvy_A Cystathionine beta-lyas 33.8 1.1E+02 0.0039 30.1 8.3 103 197-306 87-217 (427)
407 1yb1_A 17-beta-hydroxysteroid 33.7 2.4E+02 0.0084 25.1 10.1 108 199-310 30-167 (272)
408 3sho_A Transcriptional regulat 33.6 2.1E+02 0.0072 23.9 10.2 77 227-310 41-123 (187)
409 3ehe_A UDP-glucose 4-epimerase 33.6 51 0.0018 30.2 5.4 102 202-310 3-114 (313)
410 3cis_A Uncharacterized protein 33.4 2.7E+02 0.0094 25.2 12.6 56 249-308 244-305 (309)
411 3tsa_A SPNG, NDP-rhamnosyltran 33.4 1E+02 0.0036 28.9 7.7 20 291-310 125-144 (391)
412 2w8t_A SPT, serine palmitoyltr 33.3 3.2E+02 0.011 26.0 14.7 102 195-306 120-229 (427)
413 2o0m_A Transcriptional regulat 33.3 69 0.0024 30.6 6.4 91 186-277 124-245 (345)
414 3ay3_A NAD-dependent epimerase 33.1 45 0.0015 29.9 4.8 98 201-310 3-110 (267)
415 3p9x_A Phosphoribosylglycinami 32.8 1E+02 0.0036 27.6 7.1 70 202-275 6-89 (211)
416 2qxy_A Response regulator; reg 32.7 1.5E+02 0.0051 22.9 7.5 77 225-310 4-84 (142)
417 3r3s_A Oxidoreductase; structu 32.7 2.5E+02 0.0086 25.5 10.1 102 199-301 48-175 (294)
418 2ae2_A Protein (tropinone redu 32.7 61 0.0021 29.0 5.7 108 199-310 8-146 (260)
419 3vp6_A Glutamate decarboxylase 32.6 3.8E+02 0.013 26.6 12.4 100 200-306 155-283 (511)
420 2c07_A 3-oxoacyl-(acyl-carrier 32.5 82 0.0028 28.6 6.6 109 199-310 43-180 (285)
421 3nhm_A Response regulator; pro 32.5 1.6E+02 0.0056 22.3 8.5 55 199-258 26-85 (133)
422 3fq8_A Glutamate-1-semialdehyd 32.5 41 0.0014 32.5 4.7 141 165-306 71-238 (427)
423 1u2p_A Ptpase, low molecular w 32.4 71 0.0024 27.1 5.7 68 206-275 15-90 (163)
424 2f9f_A First mannosyl transfer 32.4 1.8E+02 0.0062 23.9 8.4 96 200-307 23-127 (177)
425 3mt0_A Uncharacterized protein 32.4 2.8E+02 0.0094 24.9 11.1 64 242-309 204-276 (290)
426 2gek_A Phosphatidylinositol ma 32.3 63 0.0022 30.3 5.9 96 201-307 209-313 (406)
427 2oas_A ATOA, 4-hydroxybutyrate 32.3 34 0.0012 34.2 4.1 97 190-286 9-129 (436)
428 2ark_A Flavodoxin; FMN, struct 32.3 68 0.0023 27.4 5.7 65 243-309 26-96 (188)
429 1smk_A Malate dehydrogenase, g 32.1 1.8E+02 0.0062 27.4 9.2 100 201-303 9-118 (326)
430 3ffr_A Phosphoserine aminotran 32.1 1.7E+02 0.0058 26.6 8.9 95 201-306 63-166 (362)
431 3dod_A Adenosylmethionine-8-am 32.0 75 0.0026 30.9 6.6 117 188-306 91-250 (448)
432 2a9o_A Response regulator; ess 32.0 1.5E+02 0.0053 21.8 7.9 76 227-310 3-81 (120)
433 2r85_A PURP protein PF1517; AT 31.8 89 0.003 28.8 6.8 19 238-256 12-30 (334)
434 2ph3_A 3-oxoacyl-[acyl carrier 31.8 1.6E+02 0.0055 25.5 8.3 74 201-275 2-88 (245)
435 3ppl_A Aspartate aminotransfer 31.8 2.6E+02 0.009 26.5 10.5 101 197-306 93-220 (427)
436 1n2s_A DTDP-4-, DTDP-glucose o 31.7 90 0.0031 28.1 6.7 94 202-310 2-105 (299)
437 3bb8_A CDP-4-keto-6-deoxy-D-gl 31.7 1.2E+02 0.0042 29.2 8.1 102 195-306 73-190 (437)
438 1f0k_A MURG, UDP-N-acetylgluco 31.7 3E+02 0.01 25.1 11.2 66 225-307 212-280 (364)
439 2qzj_A Two-component response 31.6 1.3E+02 0.0044 23.4 7.0 78 225-310 4-84 (136)
440 2ywj_A Glutamine amidotransfer 31.6 1.5E+02 0.0052 25.0 7.8 64 241-314 14-81 (186)
441 3bcv_A Putative glycosyltransf 31.6 94 0.0032 26.8 6.6 56 202-257 10-66 (240)
442 1b5p_A Protein (aspartate amin 31.6 1.3E+02 0.0044 28.3 8.1 95 199-306 91-202 (385)
443 1z45_A GAL10 bifunctional prot 31.5 1.8E+02 0.006 30.3 9.7 110 199-310 10-135 (699)
444 4fzr_A SSFS6; structural genom 31.5 86 0.003 29.7 6.8 19 293-311 136-154 (398)
445 1qo0_D AMIR; binding protein, 31.4 33 0.0011 29.0 3.4 77 224-310 11-88 (196)
446 3op7_A Aminotransferase class 31.4 1.3E+02 0.0045 27.9 8.0 102 198-306 80-192 (375)
447 2c20_A UDP-glucose 4-epimerase 31.3 1.2E+02 0.004 27.7 7.6 102 201-310 2-118 (330)
448 1rkx_A CDP-glucose-4,6-dehydra 31.3 52 0.0018 30.8 5.1 109 199-310 8-132 (357)
449 1ae1_A Tropinone reductase-I; 31.1 69 0.0023 29.0 5.8 95 199-297 20-141 (273)
450 3b8x_A WBDK, pyridoxamine 5-ph 31.0 1.8E+02 0.0063 27.2 9.1 101 195-306 45-160 (390)
451 4f6c_A AUSA reductase domain p 30.9 58 0.002 31.6 5.5 111 199-313 68-200 (427)
452 3rui_A Ubiquitin-like modifier 30.8 3.7E+02 0.012 25.8 12.3 99 200-308 34-171 (340)
453 1k68_A Phytochrome response re 30.8 1.7E+02 0.006 22.1 8.0 77 226-310 3-94 (140)
454 3euc_A Histidinol-phosphate am 30.7 73 0.0025 29.6 6.0 100 200-306 86-197 (367)
455 1qv9_A F420-dependent methylen 30.7 97 0.0033 28.7 6.4 40 220-260 61-101 (283)
456 4e2x_A TCAB9; kijanose, tetron 30.5 47 0.0016 32.2 4.8 65 175-240 294-358 (416)
457 3ius_A Uncharacterized conserv 30.4 75 0.0026 28.5 5.9 94 201-310 6-103 (286)
458 1meo_A Phosophoribosylglycinam 30.1 1.4E+02 0.0049 26.5 7.5 70 202-275 4-87 (209)
459 2gkg_A Response regulator homo 30.1 1.2E+02 0.0042 22.6 6.4 75 226-307 6-86 (127)
460 1iz0_A Quinone oxidoreductase; 30.1 1E+02 0.0035 28.3 6.9 52 197-255 123-175 (302)
461 3av3_A Phosphoribosylglycinami 30.0 1.9E+02 0.0063 25.7 8.3 53 202-257 7-60 (212)
462 3i4f_A 3-oxoacyl-[acyl-carrier 30.0 1.4E+02 0.0046 26.5 7.6 108 200-308 7-144 (264)
463 3t18_A Aminotransferase class 29.9 3.3E+02 0.011 25.6 10.8 100 201-306 103-223 (413)
464 3a28_C L-2.3-butanediol dehydr 29.8 2E+02 0.0069 25.4 8.7 97 200-299 2-125 (258)
465 3fg9_A Protein of universal st 29.8 2.1E+02 0.0073 22.8 11.6 102 202-307 17-155 (156)
466 3mw8_A Uroporphyrinogen-III sy 29.7 1.1E+02 0.0037 27.1 6.8 53 199-259 50-102 (240)
467 2aeu_A Hypothetical protein MJ 29.7 2.8E+02 0.0097 26.0 10.2 101 194-308 68-179 (374)
468 1o69_A Aminotransferase; struc 29.6 2.5E+02 0.0085 26.4 9.8 97 197-306 45-154 (394)
469 2fz5_A Flavodoxin; alpha/beta 29.6 96 0.0033 24.4 5.8 64 243-308 21-87 (137)
470 3sju_A Keto reductase; short-c 29.6 67 0.0023 29.3 5.4 96 199-298 23-144 (279)
471 1fg7_A Histidinol phosphate am 29.3 1.4E+02 0.0049 27.7 7.9 54 199-257 75-128 (356)
472 2rdm_A Response regulator rece 29.3 1.8E+02 0.0063 21.9 8.7 79 225-310 5-88 (132)
473 3ab8_A Putative uncharacterize 29.3 1.6E+02 0.0055 26.0 7.9 44 265-312 107-152 (268)
474 2ejb_A Probable aromatic acid 29.2 1.2E+02 0.0042 26.5 6.8 20 214-233 19-38 (189)
475 1k66_A Phytochrome response re 29.2 1.7E+02 0.0058 22.5 7.3 79 224-310 5-101 (149)
476 1poi_B Glutaconate coenzyme A- 29.2 2.9E+02 0.0098 25.4 9.7 92 186-285 8-116 (260)
477 3oz2_A Digeranylgeranylglycero 29.2 35 0.0012 31.9 3.5 10 226-235 28-37 (397)
478 1ex2_A Protein MAF; structural 29.2 1.2E+02 0.0042 26.7 6.8 90 206-308 8-105 (189)
479 2rh8_A Anthocyanidin reductase 29.1 2E+02 0.0069 26.2 8.8 109 200-310 9-131 (338)
480 1to6_A Glycerate kinase; glyce 29.0 33 0.0011 33.7 3.3 49 261-312 272-320 (371)
481 3odg_A Xanthosine phosphorylas 29.0 1.5E+02 0.0051 27.8 7.8 68 209-308 173-243 (287)
482 3jyo_A Quinate/shikimate dehyd 29.0 1.7E+02 0.0058 27.1 8.2 73 199-273 126-200 (283)
483 3eh7_A 4-hydroxybutyrate COA-t 28.9 64 0.0022 32.3 5.4 114 191-306 19-157 (434)
484 1q7r_A Predicted amidotransfer 28.9 66 0.0023 28.4 5.1 77 225-313 23-106 (219)
485 3hzh_A Chemotaxis response reg 28.9 2.2E+02 0.0075 22.6 9.1 79 224-310 35-120 (157)
486 4es6_A Uroporphyrinogen-III sy 28.9 1.1E+02 0.0037 27.5 6.7 60 191-258 50-112 (254)
487 2cwd_A Low molecular weight ph 28.8 58 0.002 27.7 4.5 70 206-276 15-92 (161)
488 3hv2_A Response regulator/HD d 28.7 1.5E+02 0.0053 23.3 7.1 79 224-310 13-95 (153)
489 2uvd_A 3-oxoacyl-(acyl-carrier 28.7 1.6E+02 0.0053 26.0 7.7 76 199-275 3-90 (246)
490 3pk0_A Short-chain dehydrogena 28.7 91 0.0031 28.0 6.1 98 199-300 9-133 (262)
491 2xhz_A KDSD, YRBH, arabinose 5 28.6 1.6E+02 0.0054 24.6 7.4 63 241-310 66-132 (183)
492 2ggs_A 273AA long hypothetical 28.6 73 0.0025 28.2 5.4 97 202-310 2-108 (273)
493 2a3n_A Putative glucosamine-fr 28.5 3.8E+02 0.013 25.3 11.8 35 240-274 119-153 (355)
494 2qbu_A Precorrin-2 methyltrans 28.4 1E+02 0.0034 27.3 6.3 51 215-266 86-139 (232)
495 3h4t_A Glycosyltransferase GTF 28.4 80 0.0027 30.3 6.0 99 203-310 5-125 (404)
496 3n8i_A Low molecular weight ph 28.3 96 0.0033 26.2 5.8 72 206-277 16-94 (157)
497 3s2u_A UDP-N-acetylglucosamine 28.2 2.5E+02 0.0086 26.4 9.5 29 275-307 93-121 (365)
498 1oc2_A DTDP-glucose 4,6-dehydr 28.1 55 0.0019 30.4 4.6 109 201-309 5-125 (348)
499 2ywd_A Glutamine amidotransfer 28.1 1.1E+02 0.0039 25.9 6.4 62 240-311 15-84 (191)
500 1udb_A Epimerase, UDP-galactos 28.0 2E+02 0.0068 26.3 8.6 106 202-310 2-124 (338)
No 1
>3a11_A Translation initiation factor EIF-2B, delta subun; isomerase, hexamer, rossmann fold; 2.50A {Thermococcus kodakaraensis} PDB: 3a9c_A* 3vm6_A*
Probab=100.00 E-value=4.7e-73 Score=562.82 Aligned_cols=311 Identities=25% Similarity=0.351 Sum_probs=288.4
Q ss_pred HHHHHHHHHHhcCCccCHHHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHhcCCCcccHHHHHHHHHHHHH
Q 045642 6 ALVSDLPSKLRKRRVQGSYETARLTAELLRAVILQHKEPTASGAASLIEAVRRVGEQLIAANPVELAVGNIVRHVLHIIR 85 (406)
Q Consensus 6 ~~i~~l~~~l~~~~i~Gs~~~A~~t~~~lr~~v~~~~~~~~~~~~~L~~~i~~~g~~L~~a~P~~~~i~Nivrrvl~~Ir 85 (406)
..+++++..||+++++||.+++++++..|...+.. .+|.+.++|++.|+..+++|.++||++++|+|++||+++.|+
T Consensus 21 ~~~~~~~~aI~~m~VrGApai~iaaa~~l~~~~~~---~~~~~~~~l~~~l~~~~~~L~~aRPtav~L~~a~~~~~~~i~ 97 (338)
T 3a11_A 21 KEVLEIAEKIKNMEIRGAGKIARSAAYALQLQAEK---SKATNVDEFWKEMKQAAKILFETRPTAVSLPNALRYVMHRGK 97 (338)
T ss_dssp SHHHHHHHHHHTCSSCSHHHHHHHHHHHHHHHHHH---CCCCSHHHHHHHHHHHHHHHHTTCTTCSHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHhCcEeCcHHHHHHHHHHHHHHHHh---ccCCCHHHHHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHH
Confidence 46889999999999999999999999999999999 889999999999999999999999999999999999999998
Q ss_pred hhccCCCcccccccccccccchhhhhhhcccccCcccccCCCCCCchhhhhhhcCCCCCccccCCCccccccCcccchHH
Q 045642 86 EEDLSPLTDIVGELKLSAEDDVEDIAEDENSQKSSATTDGCLLKPPLLLAVFEHLPDSAPACQTFSSENIFAGKADKSAK 165 (406)
Q Consensus 86 ee~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~sl~~l~~~~~~~~~~~~~~s~~~~~~~~~~~~~~ 165 (406)
++... ..+.+
T Consensus 98 ~~~~~----------------------------------------------------------------------~~~~~ 107 (338)
T 3a11_A 98 IAYSS----------------------------------------------------------------------GADLE 107 (338)
T ss_dssp HHHHT----------------------------------------------------------------------TCCHH
T ss_pred Hhccc----------------------------------------------------------------------CCCHH
Confidence 75210 00136
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcEEEeccChHHHHHHHHHHHHcCCceEEEEecCCCCcchHHHHHH
Q 045642 166 KLKSELIKAVNELIEDINTCREGIAEQAMELIHQNEVILTLGHSKFVKEFLCAAKEKKRSFEVFIADGAPKFEGHILAKE 245 (406)
Q Consensus 166 ~~k~~l~~~i~~~~~e~~~~~~~I~~~a~~~I~~g~~ILT~g~S~tV~~~L~~A~~~~~~f~ViV~EsrP~~eG~~~a~~ 245 (406)
++|+.+++.+++|++|...++++|+++++++|++|++|||||+|+||+.+|+.|+++|++|+|||+||||.+||+++|++
T Consensus 108 ~~k~~l~~~a~~~~~e~~~~~~~I~~~g~~~I~~g~~ILTh~~S~tvl~~l~~A~~~gk~~~V~v~EtRP~~qGrltA~e 187 (338)
T 3a11_A 108 QLRFVIINAAKEFIHNSEKALERIGEFGAKRIEDGDVIMTHCHSKAAISVMKTAWEQGKDIKVIVTETRPKWQGKITAKE 187 (338)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCTTCEEEECSCCHHHHHHHHHHHHTTCCCEEEEECCTTTTHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEeCCcHHHHHHHHHHHHCCCeEEEEEeCCCCchhhHHHHHH
Confidence 78999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhCCCceEEEcchHHHHHhhcCCEEEEcceeEeeCCCcccccchHHHHHHHhhCCCceEEecCCccccccCCCCccccc
Q 045642 246 LDKKGLKAIVITDSAVFAMISRVNMVIVGVHAVMANGGVIAPAGLHVLALAAKKHDVPFVVVASTHELCSLYPHNLEVLL 325 (406)
Q Consensus 246 L~~~GI~vt~I~Dsav~~~m~~vd~VllGAdav~~nG~vvnk~GT~~lAl~Ak~~~vPv~V~aes~K~~~~~~~d~~~i~ 325 (406)
|.+.||+||+|+|++++++|++||+||+|||+|++||+++||+|||++|++||+|+|||||+||+|||++.++.+.. ++
T Consensus 188 L~~~GI~vtlI~Dsa~~~~M~~Vd~VivGAd~V~anG~v~NKiGT~~lAl~Ak~~~vPfyV~a~~~k~d~~~~~g~~-i~ 266 (338)
T 3a11_A 188 LASYGIPVIYVVDSAARHYMKMTDKVVMGADSITVNGAVINKIGTALIALTAKEHRVWTMIAAETYKFHPETMLGQL-VE 266 (338)
T ss_dssp HHHTTCCEEEECGGGTTTTGGGCSEEEECCSEECTTSCEEEETTHHHHHHHHHHTTCEEEEECCGGGBCSCCSSSSC-CC
T ss_pred HHhCCCCEEEEehHHHHHHHHhCCEEEECccEEecCCCEeecccHHHHHHHHHHcCCCEEEecccceecccCCCCcc-cc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999998754 59
Q ss_pred cccCCcccccccCCcccccccCcCCCCCcccccCCcceecCCCCccEEEeCCCCCCChhHHHHHHHhcCCCCC
Q 045642 326 NEMRCPSELLNFEEFSDCIDYGIASSSSLLHVVNPAFDYVPPELIRLFVTDIGGYSPSYIYRLIADYYSSEDL 398 (406)
Q Consensus 326 ~e~~~p~ev~~~~~~~~~~~~~~~~~~~~v~v~np~fD~tPp~lIt~iITE~G~~~Ps~v~~ll~e~y~~~d~ 398 (406)
+|+++|.|++.+ +.... | .++++++||+||+|||+|||+||||.|+++|++|+++|++||+++|+
T Consensus 267 iE~r~~~ev~~~-g~~~~-----w--~~~v~v~NPaFDvTP~~lIt~iITE~Gv~~p~~v~~~L~e~y~~~~~ 331 (338)
T 3a11_A 267 IEMRDPTEVIPE-DELKT-----W--PKNIEVWNPAFDVTPPEYVDVIITERGIIPPYAAIDILREEFGWALK 331 (338)
T ss_dssp CCBCCGGGTSCH-HHHTT-----S--CTTEEECCBSEEEECGGGCSEEEETTEEECGGGHHHHHHHHHCCCSS
T ss_pred cccCCHHHcccc-ccccc-----C--CCCceecCcceeccCHHHcCEEecCCCccCchhHHHHHHHHhCcccc
Confidence 999999999865 21110 0 23489999999999999999999999999999999999999999886
No 2
>2yvk_A Methylthioribose-1-phosphate isomerase; methionine salvage pathway,; HET: MRU; 2.40A {Bacillus subtilis} PDB: 2yrf_A*
Probab=100.00 E-value=2.3e-67 Score=526.46 Aligned_cols=304 Identities=20% Similarity=0.288 Sum_probs=277.0
Q ss_pred HHHHHHHHHHhcCCccCHHHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHhcCCCcccHHHHHHHHHHHHH
Q 045642 6 ALVSDLPSKLRKRRVQGSYETARLTAELLRAVILQHKEPTASGAASLIEAVRRVGEQLIAANPVELAVGNIVRHVLHIIR 85 (406)
Q Consensus 6 ~~i~~l~~~l~~~~i~Gs~~~A~~t~~~lr~~v~~~~~~~~~~~~~L~~~i~~~g~~L~~a~P~~~~i~Nivrrvl~~Ir 85 (406)
..+++++..||+++|+||.++|++++..|...+.. .+|.+.++|++.|+..+++|.++||++++|+|++||+++.|+
T Consensus 57 ~~~~~~~~aIk~m~VrGApaIgiaaa~~l~l~~~~---~~~~~~~~l~~~l~~~~~~L~~aRPtavnL~~ai~r~~~~i~ 133 (374)
T 2yvk_A 57 TTKEDVFDAIVTLKVRGAPAIGITAAFGLALAAKD---IETDNVTEFRRRLEDIKQYLNSSRPTAINLSWALERLSHSVE 133 (374)
T ss_dssp CSHHHHHHHHHTTSSCSHHHHHHHHHHHHHHHHTT---CCCSCHHHHHHHHHHHHHHHHTTCSSCHHHHHHHHHHHHHTT
T ss_pred CCHHHHHHHHHhCccCCcHHHHHHHHHHHHHHHHh---ccCCCHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHH
Confidence 35789999999999999999999999999998888 778899999999999999999999999999999999998876
Q ss_pred hhccCCCcccccccccccccchhhhhhhcccccCcccccCCCCCCchhhhhhhcCCCCCccccCCCccccccCcccchHH
Q 045642 86 EEDLSPLTDIVGELKLSAEDDVEDIAEDENSQKSSATTDGCLLKPPLLLAVFEHLPDSAPACQTFSSENIFAGKADKSAK 165 (406)
Q Consensus 86 ee~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~sl~~l~~~~~~~~~~~~~~s~~~~~~~~~~~~~~ 165 (406)
++. +.+
T Consensus 134 ~~~--------------------------------------------------------------------------~~~ 139 (374)
T 2yvk_A 134 NAI--------------------------------------------------------------------------SVN 139 (374)
T ss_dssp TCS--------------------------------------------------------------------------SHH
T ss_pred hcC--------------------------------------------------------------------------CHH
Confidence 430 125
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcEEEeccCh--------HHHHHHHHHHHHcCCceEEEEecCCCCc
Q 045642 166 KLKSELIKAVNELIEDINTCREGIAEQAMELIHQNEVILTLGHS--------KFVKEFLCAAKEKKRSFEVFIADGAPKF 237 (406)
Q Consensus 166 ~~k~~l~~~i~~~~~e~~~~~~~I~~~a~~~I~~g~~ILT~g~S--------~tV~~~L~~A~~~~~~f~ViV~EsrP~~ 237 (406)
++|+.+++.+++|++|...++++|+++++++|++|++|||||+| +||+.+|+.|+++|++|+|||+||||++
T Consensus 140 ~~k~~l~~~a~~~~~e~~~~~~~I~~~g~~~I~~g~~ILThcnsg~Lat~g~gTal~~l~~A~~~gk~~~V~v~EtRP~~ 219 (374)
T 2yvk_A 140 EAKTNLVHEAIQIQVEDEETCRLIGQNALQLFKKGDRIMTICNAGSIATSRYGTALAPFYLAKQKDLGLHIYACETRPVL 219 (374)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGCCTTCEEEECSCCSTTTSSSSCSTTHHHHHHHHTTCCCEEEEECCTTTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEecCCCccccCCCcHHHHHHHHHHHcCCEEEEEEeCCCCcc
Confidence 68999999999999999999999999999999999999999876 6999999999999999999999999999
Q ss_pred ch-HHHHHHHHhCCCceEEEcchHHHHHhhc--CCEEEEcceeEeeCCCcccccchHHHHHHHhhCCCceEEecCCcccc
Q 045642 238 EG-HILAKELDKKGLKAIVITDSAVFAMISR--VNMVIVGVHAVMANGGVIAPAGLHVLALAAKKHDVPFVVVASTHELC 314 (406)
Q Consensus 238 eG-~~~a~~L~~~GI~vt~I~Dsav~~~m~~--vd~VllGAdav~~nG~vvnk~GT~~lAl~Ak~~~vPv~V~aes~K~~ 314 (406)
|| +++|++|.+.||+||+|+|++++++|++ ||+||+|||+|++||+++||+|||++|++||+|+|||||+||+|||+
T Consensus 220 qG~rltA~eL~~~GIpvtlI~Dsa~~~~M~~~~Vd~ViVGAD~V~aNG~v~NKiGTy~lAl~Ak~~~vPfyV~ap~~k~d 299 (374)
T 2yvk_A 220 QGSRLTAWELMQGGIDVTLITDSMAAHTMKEKQISAVIVGADRIAKNGDTANKIGTYGLAILANAFDIPFFVAAPLSTFD 299 (374)
T ss_dssp HHHHTHHHHHHTTTCEEEEECGGGHHHHHHHTTCCEEEECCSEEETTCCEEEETTHHHHHHHHHHTTCCEEEECCGGGEE
T ss_pred ccHHHHHHHHHHcCCCEEEEehhHHHHHhhhcCCCEEEECccEEecCCCEEecccHHHHHHHHHHcCCCEEEecccceeC
Confidence 99 5899999999999999999999999998 99999999999999999999999999999999999999999999999
Q ss_pred ccCCCCccccccccCCcccccccCCcccccccCcCCCCCcccccCCcceecCCCCccEEEeCCCCCCChhHHHHHHHhcC
Q 045642 315 SLYPHNLEVLLNEMRCPSELLNFEEFSDCIDYGIASSSSLLHVVNPAFDYVPPELIRLFVTDIGGYSPSYIYRLIADYYS 394 (406)
Q Consensus 315 ~~~~~d~~~i~~e~~~p~ev~~~~~~~~~~~~~~~~~~~~v~v~np~fD~tPp~lIt~iITE~G~~~Ps~v~~ll~e~y~ 394 (406)
+.++.+. .+++|+++|.|+..+.+... ..++++++||+||+|||+|||+||||.|+++|++.+.+. ++|.
T Consensus 300 ~~~~~g~-~i~iEer~~~Ev~~~~g~~~--------~~~~v~v~NPaFDvTP~~lIt~iITE~Gv~~P~~~~~l~-~~~~ 369 (374)
T 2yvk_A 300 TKVKCGA-DIPIEERDPEEVRQISGVRT--------APSNVPVFNPAFDITPHDLISGIITEKGIMTGNYEEEIE-QLFK 369 (374)
T ss_dssp TTCSSGG-GSCCCBCCTHHHHEETTEEC--------SCTTCCBCCBSEEEECGGGCSEEEETTEEECSCHHHHHH-HHTC
T ss_pred ccCCCcc-ccccccCCHHHhcccCCcee--------cCCCcceeCcceeccCHHHCCEEeccCCccCcchHHHHH-HHhh
Confidence 9998874 45999999999987755211 123489999999999999999999999999999988765 6665
Q ss_pred CC
Q 045642 395 SE 396 (406)
Q Consensus 395 ~~ 396 (406)
.+
T Consensus 370 ~~ 371 (374)
T 2yvk_A 370 GE 371 (374)
T ss_dssp C-
T ss_pred hc
Confidence 43
No 3
>1t5o_A EIF2BD, translation initiation factor EIF2B, subunit DELT; subunit delta, structural GEN PSI, protein structure initiative; 1.90A {Archaeoglobus fulgidus} SCOP: c.124.1.5
Probab=100.00 E-value=8.2e-67 Score=519.36 Aligned_cols=300 Identities=21% Similarity=0.288 Sum_probs=273.4
Q ss_pred HHHHHHHHHHhcCCccCHHHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHhcCCCcccHHHHHHHHHHHHH
Q 045642 6 ALVSDLPSKLRKRRVQGSYETARLTAELLRAVILQHKEPTASGAASLIEAVRRVGEQLIAANPVELAVGNIVRHVLHIIR 85 (406)
Q Consensus 6 ~~i~~l~~~l~~~~i~Gs~~~A~~t~~~lr~~v~~~~~~~~~~~~~L~~~i~~~g~~L~~a~P~~~~i~Nivrrvl~~Ir 85 (406)
..+++++..||+++|+||.+++++++..|...+.. .+|.+.++|++.|+..+++|.++||++++|+|++||+++.|+
T Consensus 30 ~~~~~~~~aIk~m~VrGApai~iaaa~~l~l~~~~---~~~~~~~~l~~~l~~~~~~L~~aRPtav~l~~a~~~~~~~i~ 106 (351)
T 1t5o_A 30 RNVEELADAIKKLAVRGAPALEAAGAYGIALAARE---REFADVDELKEHLKKAADFLASTRPTAVNLFVGIERALNAAL 106 (351)
T ss_dssp CSHHHHHHHHHTTSSCSHHHHHHHHHHHHHHHTTS---SCCSCHHHHHHHHHHHHHHHHTTCTTCHHHHHHHHHHHHHHT
T ss_pred CCHHHHHHHHHhCCcCCcHHHHHHHHHHHHHHHHh---ccCCCHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHh
Confidence 35789999999999999999999999999988877 778899999999999999999999999999999999999886
Q ss_pred hhccCCCcccccccccccccchhhhhhhcccccCcccccCCCCCCchhhhhhhcCCCCCccccCCCccccccCcccchHH
Q 045642 86 EEDLSPLTDIVGELKLSAEDDVEDIAEDENSQKSSATTDGCLLKPPLLLAVFEHLPDSAPACQTFSSENIFAGKADKSAK 165 (406)
Q Consensus 86 ee~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~sl~~l~~~~~~~~~~~~~~s~~~~~~~~~~~~~~ 165 (406)
++. +.+
T Consensus 107 ~~~--------------------------------------------------------------------------~~~ 112 (351)
T 1t5o_A 107 KGE--------------------------------------------------------------------------SVE 112 (351)
T ss_dssp TCS--------------------------------------------------------------------------SHH
T ss_pred hcC--------------------------------------------------------------------------CHH
Confidence 520 125
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcEEEeccCh--------HHHHHHHHHHHHcCCceEEEEecCCCCc
Q 045642 166 KLKSELIKAVNELIEDINTCREGIAEQAMELIHQNEVILTLGHS--------KFVKEFLCAAKEKKRSFEVFIADGAPKF 237 (406)
Q Consensus 166 ~~k~~l~~~i~~~~~e~~~~~~~I~~~a~~~I~~g~~ILT~g~S--------~tV~~~L~~A~~~~~~f~ViV~EsrP~~ 237 (406)
++|+.+++.+++|++|...++++|+++++++|++|++|||||+| +||+.+|+.|+++|++|+|||+||||.+
T Consensus 113 ~~k~~l~~~~~~~~~e~~~~~~~I~~~g~~~I~~g~~ILThcnsg~lat~g~gtal~~l~~A~~~gk~~~V~v~EtRP~~ 192 (351)
T 1t5o_A 113 EVKELALREAEKLAEEDVERNRKMGEYGAELLEDGDVVLTYCNAGRLATVDWGTALGVVRSAVEQGKEIRVIACETRPLN 192 (351)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCTTCEEEECSCCSSSSSSSSCSHHHHHHHHHHTTCCCEEEEECCTTTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEecCCccccccCCChHHHHHHHHHHCCCEEEEEEeCCCccc
Confidence 68999999999999999999999999999999999999999865 6899999999999999999999999999
Q ss_pred ch-HHHHHHHHhCCCceEEEcchHHHHHhhc--CCEEEEcceeEeeCCCcccccchHHHHHHHhhCCCceEEecCCcccc
Q 045642 238 EG-HILAKELDKKGLKAIVITDSAVFAMISR--VNMVIVGVHAVMANGGVIAPAGLHVLALAAKKHDVPFVVVASTHELC 314 (406)
Q Consensus 238 eG-~~~a~~L~~~GI~vt~I~Dsav~~~m~~--vd~VllGAdav~~nG~vvnk~GT~~lAl~Ak~~~vPv~V~aes~K~~ 314 (406)
|| +++|++|.+.||+||+|+|++++++|++ ||+||+|||+|++|| ++||+|||++|++||+|+|||||+||+|||+
T Consensus 193 qG~rlta~eL~~~GI~vtlI~Dsa~~~~M~~~~Vd~VivGAd~V~aNG-v~NKiGT~~lAl~Ak~~~vPfyV~a~~~k~d 271 (351)
T 1t5o_A 193 QGSRLTCWELMEDGIDVTLITDSMVGIVMQKGMVDKVIVGADRIVRDA-VFNKIGTYTVSVVAKHHNIPFYVAAPKATFD 271 (351)
T ss_dssp HHHHTHHHHHHHTTCCEEEECGGGHHHHHHTTCCSEEEECCSEEETTE-EEEETTHHHHHHHHHHTTCCEEEECCGGGBC
T ss_pred ccHHHHHHHHHhCCCCEEEEehhHHHHHhhcCCCCEEEECccchhhcC-cccccCHHHHHHHHHHcCCCEEEeCccceec
Confidence 99 5899999999999999999999999988 999999999999999 9999999999999999999999999999999
Q ss_pred ccCCCCccccccccCCcccccccCCcccccccCcCCCCCcccccCCcceecCCCCccEEEeCCCCCCChhHHHHHHHhcC
Q 045642 315 SLYPHNLEVLLNEMRCPSELLNFEEFSDCIDYGIASSSSLLHVVNPAFDYVPPELIRLFVTDIGGYSPSYIYRLIADYYS 394 (406)
Q Consensus 315 ~~~~~d~~~i~~e~~~p~ev~~~~~~~~~~~~~~~~~~~~v~v~np~fD~tPp~lIt~iITE~G~~~Ps~v~~ll~e~y~ 394 (406)
+. +.+ ..+++|+++|.|++.+.+... ..++++++||+||+|||+|||+||||.|+++|++.+.+. ++|.
T Consensus 272 ~~-~~g-~~i~iEer~~~ev~~~~g~~~--------~~~~v~v~NPaFDvTP~~lIt~iITE~Gv~~p~~~~~l~-~~~~ 340 (351)
T 1t5o_A 272 WE-RTA-KDVVIEERPREELIFCGKRQI--------APLNVKVYNPAFDPTPLENVTALITEYGVIYPPYEVNVP-KVLK 340 (351)
T ss_dssp TT-CCG-GGCCCCBCCTHHHHEETTEEC--------SCTTCEECCBSEEEEEGGGCSEEEETTEEECSCHHHHHH-HHTT
T ss_pred cc-cCC-CccccccCCHHHhcccCCeee--------cCCCcceeCccccCCCHHHCCEEEeCCCccCcchHHHHH-HHHc
Confidence 99 654 556999999999997755211 123489999999999999999999999999999988766 4443
No 4
>1t9k_A Probable methylthioribose-1-phosphate isomerase; structural genomics, translation initiation factor, AIF-2B subunit, PSI; 2.60A {Thermotoga maritima} SCOP: c.124.1.5
Probab=100.00 E-value=2.1e-66 Score=515.71 Aligned_cols=298 Identities=21% Similarity=0.257 Sum_probs=270.9
Q ss_pred HHHHHHHHHHhcCCccCHHHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHhcCCCcccHHHHHHHHHHHHH
Q 045642 6 ALVSDLPSKLRKRRVQGSYETARLTAELLRAVILQHKEPTASGAASLIEAVRRVGEQLIAANPVELAVGNIVRHVLHIIR 85 (406)
Q Consensus 6 ~~i~~l~~~l~~~~i~Gs~~~A~~t~~~lr~~v~~~~~~~~~~~~~L~~~i~~~g~~L~~a~P~~~~i~Nivrrvl~~Ir 85 (406)
..+++++..||+++++||.+++.+++..+...+.. ..+.+.++ .|+..+++|.++||++++|+|++||+++.|+
T Consensus 35 ~~~~~~~~aIk~m~VrGAp~ig~aaa~~l~l~~~~---~~~~~~~~---~l~~~~~~L~~aRPtav~l~~a~~~~~~~i~ 108 (347)
T 1t9k_A 35 KTHEEVAHAIKEMIVRGAPAIGVAAAFGYVLGLRD---YKTGSLTD---WMKQVKETLARTRPTAVNLFWALNRMEKVFF 108 (347)
T ss_dssp CSHHHHHHHHHHTSSCSHHHHHHHHHHHHHHHHHT---CCSSCHHH---HHHHHHHHHHTSCSSCTHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHhCCcCCcHHHHHHHHHHHHHHHHh---cccCCHHH---HHHHHHHHHHHhCCchHHHHHHHHHHHHHHH
Confidence 45889999999999999999999999999988887 66667664 4999999999999999999999999999997
Q ss_pred hhccCCCcccccccccccccchhhhhhhcccccCcccccCCCCCCchhhhhhhcCCCCCccccCCCccccccCcccchHH
Q 045642 86 EEDLSPLTDIVGELKLSAEDDVEDIAEDENSQKSSATTDGCLLKPPLLLAVFEHLPDSAPACQTFSSENIFAGKADKSAK 165 (406)
Q Consensus 86 ee~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~sl~~l~~~~~~~~~~~~~~s~~~~~~~~~~~~~~ 165 (406)
++. . .+
T Consensus 109 ~~~------~--------------------------------------------------------------------~~ 114 (347)
T 1t9k_A 109 ENA------D--------------------------------------------------------------------RE 114 (347)
T ss_dssp TTT------T--------------------------------------------------------------------CT
T ss_pred hcC------C--------------------------------------------------------------------HH
Confidence 641 0 02
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcEEEeccChH--------HHHHHHHHHHHcCCceEEEEecCCCCc
Q 045642 166 KLKSELIKAVNELIEDINTCREGIAEQAMELIHQNEVILTLGHSK--------FVKEFLCAAKEKKRSFEVFIADGAPKF 237 (406)
Q Consensus 166 ~~k~~l~~~i~~~~~e~~~~~~~I~~~a~~~I~~g~~ILT~g~S~--------tV~~~L~~A~~~~~~f~ViV~EsrP~~ 237 (406)
++|+.+++.+++|++|...++++|+++++++|++|++|||||+|+ ||+.+|+.|+++|++|+|||+||||.+
T Consensus 115 ~~k~~l~~~~~~~~~e~~~~~~~I~~~g~~~I~~g~~ILThcns~~lat~~~gtvl~~l~~A~~~gk~~~V~v~EtRP~~ 194 (347)
T 1t9k_A 115 NLFEILENEALKMAYEDIEVNKAIGKNGAQLIKDGSTILTHCNAGALATVDYGTALGVIRAAVESGKRIRVFADETRPYL 194 (347)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCTTEEEEECSCCSGGGSSSSCSHHHHHHHHHHTTCCEEEEEECCTTTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEecCCCccccCCccHHHHHHHHHHHCCCeEEEEEeCCCCcc
Confidence 478999999999999999999999999999999999999999999 999999999999999999999999999
Q ss_pred ch-HHHHHHHHhCCCceEEEcchHHHHHhhc--CCEEEEcceeEeeCCCcccccchHHHHHHHhhCCCceEEecCCcccc
Q 045642 238 EG-HILAKELDKKGLKAIVITDSAVFAMISR--VNMVIVGVHAVMANGGVIAPAGLHVLALAAKKHDVPFVVVASTHELC 314 (406)
Q Consensus 238 eG-~~~a~~L~~~GI~vt~I~Dsav~~~m~~--vd~VllGAdav~~nG~vvnk~GT~~lAl~Ak~~~vPv~V~aes~K~~ 314 (406)
|| +++|++|.+.||+||+|+|++++++|++ ||+||+|||+|++||+++||+|||++|++||+|+|||||+||+|||+
T Consensus 195 qG~rlta~eL~~~GI~vtlI~Dsa~~~~M~~~~Vd~VivGAd~V~aNG~v~NKiGT~~lAl~Ak~~~vPfyV~ap~~k~d 274 (347)
T 1t9k_A 195 QGARLTAWELMKDGIEVYVITDNMAGWLMKRGLIDAVVVGADRIALNGDTANKIGTYSLAVLAKRNNIPFYVAAPVSTID 274 (347)
T ss_dssp HHHHTHHHHHHTTTCEEEEECGGGHHHHHHTTCCSEEEECCSEEETTSCEEEETTHHHHHHHHHHTTCCEEEECCGGGEE
T ss_pred ccHHHHHHHHHhCCCCEEEEehhHHHHHhhcCCCCEEEECccEEecCCCEEecccHHHHHHHHHHcCCCEEEecccceec
Confidence 99 5899999999999999999999999988 99999999999999999999999999999999999999999999999
Q ss_pred ccCCCCccccccccCCcccccccCCcccccccCcCCCCCcccccCCcceecCCCCccEEEeCCCCCCChhHHHHHHHhc
Q 045642 315 SLYPHNLEVLLNEMRCPSELLNFEEFSDCIDYGIASSSSLLHVVNPAFDYVPPELIRLFVTDIGGYSPSYIYRLIADYY 393 (406)
Q Consensus 315 ~~~~~d~~~i~~e~~~p~ev~~~~~~~~~~~~~~~~~~~~v~v~np~fD~tPp~lIt~iITE~G~~~Ps~v~~ll~e~y 393 (406)
+.++.+. .+++|+++|.|++.+.+... ..++++++||+||+|||+|||+||||.|+++|++.+++. ++|
T Consensus 275 ~~~~~g~-~i~iE~r~~~ev~~~~g~~~--------~~~~v~v~NPaFDvTP~~lIt~iITE~Gv~~p~~~~~l~-~~~ 343 (347)
T 1t9k_A 275 PTIRSGE-EIPIEERRPEEVTHCGGNRI--------APEGVKVLNPAFDVTENTLITAIITEKGVIRPPFEENIK-KIL 343 (347)
T ss_dssp TTCSSGG-GSCCCBCCTHHHHEETTEEC--------SCTTCEECCBSEEEECGGGCSEEEETTEEECSSHHHHHH-HHH
T ss_pred cccCCcc-ccccccCChHhccccCCeec--------cCCCccccCcccccCCHHHCCEEeccCCccCcchHHHHH-HHh
Confidence 9998764 45999999999997754211 123489999999999999999999999999999998866 454
No 5
>2a0u_A Initiation factor 2B; SGPP, structural genomics, PSI, protein structure initiative eukaryotic initiation factor; 2.10A {Leishmania major} SCOP: c.124.1.5
Probab=100.00 E-value=2.5e-66 Score=520.43 Aligned_cols=307 Identities=21% Similarity=0.251 Sum_probs=270.8
Q ss_pred HHHHHHHHHHhcCCccCHHHHHHHHH----HHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHhcCCCcccHHHHHHHHH
Q 045642 6 ALVSDLPSKLRKRRVQGSYETARLTA----ELLRAVILQHKEPTASGAASLIEAVRRVGEQLIAANPVELAVGNIVRHVL 81 (406)
Q Consensus 6 ~~i~~l~~~l~~~~i~Gs~~~A~~t~----~~lr~~v~~~~~~~~~~~~~L~~~i~~~g~~L~~a~P~~~~i~Nivrrvl 81 (406)
..+++++..||+++|+||.+++++++ ..++++... .+|++.++|++.|+..+++|.++||++++|+|++||++
T Consensus 46 ~~~~~~~~aIk~m~VrGApaIgiaaa~~l~l~~~~~~~~---~~~~~~~~l~~~l~~~~~~L~~aRPtavnL~na~~r~~ 122 (383)
T 2a0u_A 46 LTVEDIWSAIKEMRVRGAPAIAVSAALGIAVATQRKAAN---GELKSGREVQTFLLTSCDFVMTSRPTAVNLFNCLRDLK 122 (383)
T ss_dssp CSHHHHHHHHHTTSSCSHHHHHHHHHHHHHHHHHHHHHH---SSCCCHHHHHHHHHHHHHHHTTSCCSCSHHHHHHHHHH
T ss_pred CCHHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHhhccc---ccCCCHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHH
Confidence 46889999999999999999965555 555666666 78999999999999999999999999999999999999
Q ss_pred HHHHhhccCCCcccccccccccccchhhhhhhcccccCcccccCCCCCCchhhhhhhcCCCCCccccCCCccccccCccc
Q 045642 82 HIIREEDLSPLTDIVGELKLSAEDDVEDIAEDENSQKSSATTDGCLLKPPLLLAVFEHLPDSAPACQTFSSENIFAGKAD 161 (406)
Q Consensus 82 ~~Iree~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~sl~~l~~~~~~~~~~~~~~s~~~~~~~~~~ 161 (406)
+.|+++...
T Consensus 123 ~~i~~~~~~----------------------------------------------------------------------- 131 (383)
T 2a0u_A 123 AQVDKLDPT----------------------------------------------------------------------- 131 (383)
T ss_dssp HHHHHSCTT-----------------------------------------------------------------------
T ss_pred HHHHHhccC-----------------------------------------------------------------------
Confidence 999875200
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc--------cCcEEEeccCh--------HHHHHHHHHHHHcCCc
Q 045642 162 KSAKKLKSELIKAVNELIEDINTCREGIAEQAMELIH--------QNEVILTLGHS--------KFVKEFLCAAKEKKRS 225 (406)
Q Consensus 162 ~~~~~~k~~l~~~i~~~~~e~~~~~~~I~~~a~~~I~--------~g~~ILT~g~S--------~tV~~~L~~A~~~~~~ 225 (406)
.+.+++|+.+++.+++|++|...++++|+++++++|+ +|++|||||+| +||+.+|+.|+++|++
T Consensus 132 ~~~~~~k~~l~~~a~~i~~e~~~~~~~I~~~g~~~I~~~~~~~~~~g~~ILThcnsg~Lat~g~gTal~~l~~A~~~gk~ 211 (383)
T 2a0u_A 132 KAAAEVAQAFVELAEAVYTNDVAFNEGIMRHGAAHILAAAKAEGRDKVSILTICNTGALATSRYGTALGVVRQLFYDGKL 211 (383)
T ss_dssp SCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSSEEEEECSCCSTTTSSSSCSHHHHHHHHHHTTCE
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCCCCCEEEEecCCcchhcCCCchHHHHHHHHHHcCCe
Confidence 0115689999999999999999999999999999999 99999999877 6999999999999999
Q ss_pred eEEEEecCCCCcch-HHHHHHHHhCCCceEEEcchHHHHHhhc--CCEEEEcceeEeeCCCcccccchHHHHHHHhhCCC
Q 045642 226 FEVFIADGAPKFEG-HILAKELDKKGLKAIVITDSAVFAMISR--VNMVIVGVHAVMANGGVIAPAGLHVLALAAKKHDV 302 (406)
Q Consensus 226 f~ViV~EsrP~~eG-~~~a~~L~~~GI~vt~I~Dsav~~~m~~--vd~VllGAdav~~nG~vvnk~GT~~lAl~Ak~~~v 302 (406)
|+|||+||||.+|| +++|++|.+.||+||+|+|++++++|++ ||+||+|||+|++||+++||+|||++|++||+|+|
T Consensus 212 ~~V~v~EtRP~~qGarltA~eL~~~GIpvtlI~Dsa~~~~M~~~~Vd~ViVGAD~V~aNG~v~NKiGTy~lAl~Ak~~~v 291 (383)
T 2a0u_A 212 ERVYACETRPWNQGARLTVYECVQEDIPCTLICDGAASSLMLNRKIDAVVVGADRICQNGDTANKIGTYNLAVSAKFHGV 291 (383)
T ss_dssp EEEEEECCTTTTHHHHTHHHHHHHTTCCEEEECGGGHHHHHHHSCCCEEEECCSEECTTCCEEEETTHHHHHHHHHHTTC
T ss_pred EEEEEeCCCCccchHHHHHHHHHHcCCCEEEEehhHHHHHhhcCCCCEEEECccEEecCCCEeecccHHHHHHHHHHcCC
Confidence 99999999999999 5899999999999999999999999998 99999999999999999999999999999999999
Q ss_pred ceEEecCCccccccCCCCccccccccCCccccccc--CCcccccccCcCCCCCcccccCCcceecCCCCcc-EEEeCCCC
Q 045642 303 PFVVVASTHELCSLYPHNLEVLLNEMRCPSELLNF--EEFSDCIDYGIASSSSLLHVVNPAFDYVPPELIR-LFVTDIGG 379 (406)
Q Consensus 303 Pv~V~aes~K~~~~~~~d~~~i~~e~~~p~ev~~~--~~~~~~~~~~~~~~~~~v~v~np~fD~tPp~lIt-~iITE~G~ 379 (406)
||||+||+|||++.++.+ ..+++|+|+|.|+..+ .+....+ +.++++++||+||+|||+||| +||||.|+
T Consensus 292 PfyV~ap~~k~d~~~~~g-~~i~iEer~~~Ev~~~~~~g~~~a~------~~~~v~v~NPaFDvTP~~lIt~~iITE~Gv 364 (383)
T 2a0u_A 292 KLYVAAPTTTLDVKTASG-NHVEIEEREPTEITTNLVTKQRVVA------DGPHLSIWNPVFDITPSELITGGIITEKGV 364 (383)
T ss_dssp CEEEECCGGGBCTTCCSG-GGSCCCBCCTHHHHBCTTTCCBCSC------CCTTEEECCBSEEEECGGGCCSEEECSSCE
T ss_pred CEEEeCCcceecCcCCCc-cccccccCCHHHhcccccCCceecC------CCCceeeecccccccChHHCCcEEEccCCc
Confidence 999999999999999887 4459999999999977 3311101 122389999999999999999 99999999
Q ss_pred CCChhHHHHHHHhcCCCC
Q 045642 380 YSPSYIYRLIADYYSSED 397 (406)
Q Consensus 380 ~~Ps~v~~ll~e~y~~~d 397 (406)
++|+. +.+||+..|
T Consensus 365 ~~p~~----~~~~~~~~~ 378 (383)
T 2a0u_A 365 QAPAA----SAPYYDIAS 378 (383)
T ss_dssp ECCCS----SSSCCCHHH
T ss_pred cCCcc----chhhcCHHH
Confidence 98875 344455433
No 6
>3ecs_A Translation initiation factor EIF-2B subunit alpha; eukaryotic translation initiation factor 2balpha (EIF2balpha); 2.65A {Homo sapiens}
Probab=100.00 E-value=3.2e-66 Score=507.56 Aligned_cols=302 Identities=26% Similarity=0.394 Sum_probs=260.6
Q ss_pred HHHHHHHHHHhcCCccCHHHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHhcCCCcccHHHHHHHHHHHHH
Q 045642 6 ALVSDLPSKLRKRRVQGSYETARLTAELLRAVILQHKEPTASGAASLIEAVRRVGEQLIAANPVELAVGNIVRHVLHIIR 85 (406)
Q Consensus 6 ~~i~~l~~~l~~~~i~Gs~~~A~~t~~~lr~~v~~~~~~~~~~~~~L~~~i~~~g~~L~~a~P~~~~i~Nivrrvl~~Ir 85 (406)
..++.|...|++++ ....|+++++.|+++++. .+|+|.++|++.|+..++.|.++|| ..+++|.++++++.|+
T Consensus 5 div~~f~~~l~~d~---~~s~aiAAi~aL~~~l~~---s~~~T~~el~~~l~~a~~~L~~~r~-avsl~~a~~~~~~~i~ 77 (315)
T 3ecs_A 5 ELIEYFKSQMKEDP---DMASAVAAIRTLLEFLKR---DKGETIQGLRANLTSAIETLCGVDS-SVAVSSGGELFLRFIS 77 (315)
T ss_dssp HHHHHHHHHHHHCT---TSCHHHHHHHHHHHHHTC---CC----CHHHHHHHHHHHTTTTTSC-CHHHHHHHHHHHHHCC
T ss_pred hHHHHHHHHHhcCC---chHHHHHHHHHHHHHHHh---CCCCCHHHHHHHHHHHHHHHHhCCC-CccHHHHHHHHHHHHH
Confidence 35788888999888 456899999999999999 9999999999999999999999998 6699999999998876
Q ss_pred hhccCCCcccccccccccccchhhhhhhcccccCcccccCCCCCCchhhhhhhcCCCCCccccCCCccccccCcccchHH
Q 045642 86 EEDLSPLTDIVGELKLSAEDDVEDIAEDENSQKSSATTDGCLLKPPLLLAVFEHLPDSAPACQTFSSENIFAGKADKSAK 165 (406)
Q Consensus 86 ee~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~sl~~l~~~~~~~~~~~~~~s~~~~~~~~~~~~~~ 165 (406)
....+ ..+.+
T Consensus 78 ~~~~~----------------------------------------------------------------------~~~~~ 87 (315)
T 3ecs_A 78 LASLE----------------------------------------------------------------------YSDYS 87 (315)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred Hhhcc----------------------------------------------------------------------cCCHH
Confidence 43100 00125
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcEEEeccChHHHHHHHHHHHHcCCceEEEEecCCCCcchHHHHHH
Q 045642 166 KLKSELIKAVNELIEDINTCREGIAEQAMELIHQNEVILTLGHSKFVKEFLCAAKEKKRSFEVFIADGAPKFEGHILAKE 245 (406)
Q Consensus 166 ~~k~~l~~~i~~~~~e~~~~~~~I~~~a~~~I~~g~~ILT~g~S~tV~~~L~~A~~~~~~f~ViV~EsrP~~eG~~~a~~ 245 (406)
++|+.+++.++.|+++++.++++|+++++++|++|++|||||+|+||+++|+.|+++|++|+|||+||||.+||..||++
T Consensus 88 ~~k~~l~~~~~~~~~~~~~a~~~I~~~~~~~I~~g~~ILTh~~S~tv~~~l~~A~~~gk~~~V~v~EsrP~~qG~~la~~ 167 (315)
T 3ecs_A 88 KCKKIMIERGELFLRRISLSRNKIADLCHTFIKDGATILTHAYSRVVLRVLEAAVAAKKRFSVYVTESQPDLSGKKMAKA 167 (315)
T ss_dssp -CTTHHHHHHHHHHHHHTTHHHHHHHHHGGGCCTTEEEEECSCCHHHHHHHHHHHTTTCCEEEEEECCTTTTHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCEEEEcCCcHHHHHHHHHHHHcCCeEEEEEecCCCcchHHHHHHH
Confidence 67889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhCCCceEEEcchHHHHHhhcCCEEEEcceeEeeCCCcccccchHHHHHHHhhCCCceEEecCCccccccCCCCccccc
Q 045642 246 LDKKGLKAIVITDSAVFAMISRVNMVIVGVHAVMANGGVIAPAGLHVLALAAKKHDVPFVVVASTHELCSLYPHNLEVLL 325 (406)
Q Consensus 246 L~~~GI~vt~I~Dsav~~~m~~vd~VllGAdav~~nG~vvnk~GT~~lAl~Ak~~~vPv~V~aes~K~~~~~~~d~~~i~ 325 (406)
|.+.||+||+|+|++++++|++||+||+|||+|++||+++||+|||++|++||+|+|||||+||+|||++.++.++..++
T Consensus 168 L~~~gI~vtli~Dsa~~~~m~~vd~VivGAd~i~~nG~v~nkiGT~~iAl~Ak~~~vP~~V~a~~~K~~~~~~~~~~~i~ 247 (315)
T 3ecs_A 168 LCHLNVPVTVVLDAAVGYIMEKADLVIVGAEGVVENGGIINKIGTNQMAVCAKAQNKPFYVVAESFKFVRLFPLNQQDVP 247 (315)
T ss_dssp HHTTTCCEEEECGGGHHHHGGGCSEEEEECSEECTTSCEEEETTHHHHHHHHHHTTCCEEEECCGGGBCSCCCSSGGGSC
T ss_pred HHHcCCCEEEEehhHHHHHHHhCCEEEECceEEecCCCeeehhhhHHHHHHHHHhCCCEEEEeccccccccCCCCcccCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999888888
Q ss_pred cccCCcccccccCCcccccccCcCCCCCcccccCCcceecCCCCccEEEeCCCCCCChhHHH-HHHHhcCC
Q 045642 326 NEMRCPSELLNFEEFSDCIDYGIASSSSLLHVVNPAFDYVPPELIRLFVTDIGGYSPSYIYR-LIADYYSS 395 (406)
Q Consensus 326 ~e~~~p~ev~~~~~~~~~~~~~~~~~~~~v~v~np~fD~tPp~lIt~iITE~G~~~Ps~v~~-ll~e~y~~ 395 (406)
+|++++.+++.+++ ...++.++||.||+|||+|||+||||.|+++|++++. +++-||-.
T Consensus 248 ~e~~~~~ev~~~~~-----------~~~~v~v~NP~fDvTP~~lIt~iITe~Gv~~p~~vs~eLik~~~~~ 307 (315)
T 3ecs_A 248 DKFKYKADTLKVAQ-----------TGQDLKEEHPWVDYTAPSLITLLFTDLGVLTPSAVSDELIKLYLAA 307 (315)
T ss_dssp GGGTC------------------------CCBCCCSEEEECGGGCSEEEETTEEECGGGHHHHHHHHHTCC
T ss_pred ccccChhhcccccc-----------CCCcCcCCCCCccCCCHHHcCEEEcCCCCCCcchhhHHHHHHHHHH
Confidence 99999999876543 1224899999999999999999999999999999985 77777754
No 7
>1vb5_A Translation initiation factor EIF-2B; 2.20A {Pyrococcus horikoshii} SCOP: c.124.1.5
Probab=100.00 E-value=1.2e-63 Score=483.70 Aligned_cols=274 Identities=24% Similarity=0.369 Sum_probs=257.3
Q ss_pred hHHHHHHHHHHHhcCCccCHHHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHhcCCCcccHHHHHHHHHHH
Q 045642 4 IQALVSDLPSKLRKRRVQGSYETARLTAELLRAVILQHKEPTASGAASLIEAVRRVGEQLIAANPVELAVGNIVRHVLHI 83 (406)
Q Consensus 4 ~~~~i~~l~~~l~~~~i~Gs~~~A~~t~~~lr~~v~~~~~~~~~~~~~L~~~i~~~g~~L~~a~P~~~~i~Nivrrvl~~ 83 (406)
+|+.+++++..||+++++||.+++++++..|+.++.+ . +.++|++.|+..+++|..+||++++|+|++||+
T Consensus 2 l~~~~~~~~~~i~~~~vrGa~~i~~aa~~~l~~~~~~---~---~~~~~~~~l~~~~~~L~~~RPtav~l~~a~~~~--- 72 (276)
T 1vb5_A 2 LPERVLEILREMKRERIKGASWLAKKGAEAFLTLAEE---L---DESLLEDAIMELREEVVKVNPSMASLYNLARFI--- 72 (276)
T ss_dssp CCHHHHHHHHHHHHCSSSCHHHHHHHHHHHHHHHHHH---S---CTTTHHHHHHHHHHHHHHHCTTCHHHHHHHHHS---
T ss_pred CcccHHHHHHHHHhCcEeCcHHHHHHHHHHHHHHHHh---c---CHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHc---
Confidence 5889999999999999999999999999999999998 4 667899999999999999999999999999998
Q ss_pred HHhhccCCCcccccccccccccchhhhhhhcccccCcccccCCCCCCchhhhhhhcCCCCCccccCCCccccccCcccch
Q 045642 84 IREEDLSPLTDIVGELKLSAEDDVEDIAEDENSQKSSATTDGCLLKPPLLLAVFEHLPDSAPACQTFSSENIFAGKADKS 163 (406)
Q Consensus 84 Iree~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~sl~~l~~~~~~~~~~~~~~s~~~~~~~~~~~~ 163 (406)
+.
T Consensus 73 --~~---------------------------------------------------------------------------- 74 (276)
T 1vb5_A 73 --PV---------------------------------------------------------------------------- 74 (276)
T ss_dssp --CC----------------------------------------------------------------------------
T ss_pred --CH----------------------------------------------------------------------------
Confidence 11
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcEEEeccChHHHHHHHHHHHHcCCceEEEEecCCCCcchHHHH
Q 045642 164 AKKLKSELIKAVNELIEDINTCREGIAEQAMELIHQNEVILTLGHSKFVKEFLCAAKEKKRSFEVFIADGAPKFEGHILA 243 (406)
Q Consensus 164 ~~~~k~~l~~~i~~~~~e~~~~~~~I~~~a~~~I~~g~~ILT~g~S~tV~~~L~~A~~~~~~f~ViV~EsrP~~eG~~~a 243 (406)
+++|+.+++.+++|++++..++++|+++++++|++|++|||||+|+|++.+|+.|+++|++|+||++||||++||+.+|
T Consensus 75 -~~~k~~l~~~~~~~~~~~~~~~~~Ia~~a~~~I~~g~~IlT~~~s~Tv~~~l~~a~~~~~~~~V~v~etrP~~qG~~~a 153 (276)
T 1vb5_A 75 -TNRRDILKSRALEFLRRMEEAKRELASIGAQLIDDGDVIITHSFSSTVLEIIRTAKERKKRFKVILTESSPDYEGLHLA 153 (276)
T ss_dssp -CSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCTTEEEECCSCCHHHHHHHHHHHHTTCCEEEEEECCTTTTHHHHHH
T ss_pred -HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCEEEEeCCChHHHHHHHHHHHcCCeEEEEEeCCCcchhhHHHH
Confidence 0136789999999999999999999999999999999999999999999999999988999999999999999999999
Q ss_pred HHHHhCCCceEEEcchHHHHHhhcCCEEEEcceeEeeCCCcccccchHHHHHHHhhCCCceEEecCCccccccCCCCccc
Q 045642 244 KELDKKGLKAIVITDSAVFAMISRVNMVIVGVHAVMANGGVIAPAGLHVLALAAKKHDVPFVVVASTHELCSLYPHNLEV 323 (406)
Q Consensus 244 ~~L~~~GI~vt~I~Dsav~~~m~~vd~VllGAdav~~nG~vvnk~GT~~lAl~Ak~~~vPv~V~aes~K~~~~~~~d~~~ 323 (406)
++|.+.||+|++|+|++++++|++||+||+|||+|.+||+++||+||+++|++||+|++||||+|++|||++. +.+ ..
T Consensus 154 ~~L~~~gI~vtli~dsa~~~~m~~vd~vivGAd~i~~nG~v~nkiGt~~iA~~A~~~~vp~~V~a~~~K~~~~-~~~-~~ 231 (276)
T 1vb5_A 154 RELEFSGIEFEVITDAQMGLFCREASIAIVGADMITKDGYVVNKAGTYLLALACHENAIPFYVAAETYKFHPT-LKS-GD 231 (276)
T ss_dssp HHHHHTTCCEEEECGGGHHHHHTTCSEEEECCSEECTTSCEEEETTHHHHHHHHHHTTCCEEEECCGGGBCSS-CCG-GG
T ss_pred HHHHHCCCCEEEEcHHHHHHHHccCCEEEEcccEEecCCCEeechhHHHHHHHHHHcCCCEEEeccccccCcc-cCc-cc
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999998 544 45
Q ss_pred cccccCCcccccccCCcccccccCcCCCCCcccccCCcceecCCCCccEEEeCCCCCCChhHH
Q 045642 324 LLNEMRCPSELLNFEEFSDCIDYGIASSSSLLHVVNPAFDYVPPELIRLFVTDIGGYSPSYIY 386 (406)
Q Consensus 324 i~~e~~~p~ev~~~~~~~~~~~~~~~~~~~~v~v~np~fD~tPp~lIt~iITE~G~~~Ps~v~ 386 (406)
+++|+++|.| . +++++||.||+|||+|||+||||.|+++|++||
T Consensus 232 i~iE~r~~~e----~---------------~v~v~np~fD~tP~~lI~~iITe~Gv~~p~~v~ 275 (276)
T 1vb5_A 232 VMLMERDLIR----G---------------NVRIRNVLFDVTPWKYVRGIITELGIVIPPRDI 275 (276)
T ss_dssp CCCCBCCCEE----T---------------TEECCCBCEEEECGGGCSEEEETTEEECTTTTC
T ss_pred cccccCCccc----c---------------CccccCCCeEecCHHHCCEEEeCCCccCccccC
Confidence 6999999976 1 288999999999999999999999999999886
No 8
>1w2w_B 5-methylthioribose-1-phosphate isomerase; EIF2B, methionine salvage pathway, translation initiation, oxidoreductase; 1.75A {Saccharomyces cerevisiae} SCOP: c.124.1.5
Probab=100.00 E-value=1.5e-47 Score=351.27 Aligned_cols=163 Identities=25% Similarity=0.310 Sum_probs=142.4
Q ss_pred CCceEEEEecCCCCcchH-HHHHHHHhCCCceEEEcchHHHHHhhc----CCEEEEcceeEeeCCCcccccchHHHHHHH
Q 045642 223 KRSFEVFIADGAPKFEGH-ILAKELDKKGLKAIVITDSAVFAMISR----VNMVIVGVHAVMANGGVIAPAGLHVLALAA 297 (406)
Q Consensus 223 ~~~f~ViV~EsrP~~eG~-~~a~~L~~~GI~vt~I~Dsav~~~m~~----vd~VllGAdav~~nG~vvnk~GT~~lAl~A 297 (406)
||+|+|||+||||++||. ++|++|.+.||+||+|+|++++++|++ ||+||+|||+|++||+++||+|||++|++|
T Consensus 2 ~k~~~V~v~EsRP~~qG~rlta~eL~~~gI~vtlI~Dsa~~~~m~~~~~~Vd~VivGAd~v~~nG~v~nkiGT~~~Al~A 81 (191)
T 1w2w_B 2 PRMGHVFPLETRPYNQGSRLTAYELVYDKIPSTLITDSSIAYRIRTSPIPIKAAFVGADRIVRNGDTANKIGTLQLAVIC 81 (191)
T ss_dssp CEEEEEEEBCCTTTTHHHHTHHHHHHHHTCCBEEBCGGGHHHHHHHCSSCEEEEEECCSEECTTSCEEEETTHHHHHHHH
T ss_pred CcEEEEEEcCCCCccccHHHHHHHHHHcCCCEEEEechHHHHHHHhCCCCCCEEEECccEEecCCCEEecccHHHHHHHH
Confidence 678999999999999995 789999999999999999999999998 999999999999999999999999999999
Q ss_pred hhCCCceEEecCCccccccCCCCccccccccCCcccccccCCc------ccc--cc------cCcCCCCCcccccCCcce
Q 045642 298 KKHDVPFVVVASTHELCSLYPHNLEVLLNEMRCPSELLNFEEF------SDC--ID------YGIASSSSLLHVVNPAFD 363 (406)
Q Consensus 298 k~~~vPv~V~aes~K~~~~~~~d~~~i~~e~~~p~ev~~~~~~------~~~--~~------~~~~~~~~~v~v~np~fD 363 (406)
|+|+|||||+||+|||++.++.+. .+++|+++|.|+..+++. ... .+ ...+...++++++||+||
T Consensus 82 k~~~vPf~V~a~~~k~~~~~~~g~-~i~iE~r~~~ev~~~~~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~v~Np~fD 160 (191)
T 1w2w_B 82 KQFGIKFFVVAPKTTIDNVTETGD-DIIVEERNPEEFKVVTGTVINPENGSLILNESGEPITGKVGIAPLEINVWNPAFD 160 (191)
T ss_dssp HHHTCEEEEECCGGGBCSSCCSGG-GCCCCBCCTHHHHEEEEEEBCTTTCCBCBCTTSCBCEEEEECSCTTCEECCBSEE
T ss_pred HHcCCCEEEecccceeeeccCCcc-eeecccCCHHHhccccCccccccccccccccccccccccccccCCCccccccccc
Confidence 999999999999999999998864 458999999999876541 000 00 000122356899999999
Q ss_pred ecCCCCccEEEeCCCCCCChhHH
Q 045642 364 YVPPELIRLFVTDIGGYSPSYIY 386 (406)
Q Consensus 364 ~tPp~lIt~iITE~G~~~Ps~v~ 386 (406)
+|||+|||+||||.|+++|+.+.
T Consensus 161 vTP~~lIt~iITE~Gv~~ps~~~ 183 (191)
T 1w2w_B 161 ITPHELIDGIITEEGVFTKNSSG 183 (191)
T ss_dssp EECGGGCSEEEETTEEECCCTTS
T ss_pred cCCHHHcCEEEecCcccCCCCcc
Confidence 99999999999999999997654
No 9
>1w2w_A 5-methylthioribose-1-phosphate isomerase; EIF2B, methionine salvage pathway, translation initiation, oxidoreductase; 1.75A {Saccharomyces cerevisiae} SCOP: c.124.1.5
Probab=99.59 E-value=9.2e-15 Score=135.04 Aligned_cols=146 Identities=13% Similarity=0.140 Sum_probs=123.5
Q ss_pred HHHHHHHHHhcCCccCHHHHHHHHHHHHHHHHHhcC---C------CCCCCHHHHHHHHHHHHHHHHhcCCCcccHHHHH
Q 045642 7 LVSDLPSKLRKRRVQGSYETARLTAELLRAVILQHK---E------PTASGAASLIEAVRRVGEQLIAANPVELAVGNIV 77 (406)
Q Consensus 7 ~i~~l~~~l~~~~i~Gs~~~A~~t~~~lr~~v~~~~---~------~~~~~~~~L~~~i~~~g~~L~~a~P~~~~i~Niv 77 (406)
.+++.+..||.++|+|+..+++.++..|.-.+...+ . .+..+..++...++....+|..+||+.+++.|++
T Consensus 37 ~~~~v~~AIk~M~VRGAPaIgiaAA~glal~a~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~sRPTAVNL~~Al 116 (211)
T 1w2w_A 37 TIDDGYSVIKSMQVRGAPAIAIVGSLSVLTEVQLIKHNPTSDVATLYSLVNWESTKTVLNKRLDFLLSSRPTAVNLSNSL 116 (211)
T ss_dssp SHHHHHHHHHTTSSCSHHHHHHHHHHHHHHHHHHHHHCTTSTGGGGSCTTCHHHHHHHHHHHHHHHHTSCCSCSHHHHHH
T ss_pred CHHHHHHHHHCCcccCchHHHHHHHHHHHHHHHhccccCChhhcccccccchHHHHHHHHHHHHHHHhcCCchhhHHHHH
Confidence 478899999999999999999999988877666421 0 1123344899999999999999999999999999
Q ss_pred HHHHHHHHhhccCCCcccccccccccccchhhhhhhcccccCcccccCCCCCCchhhhhhhcCCCCCccccCCCcccccc
Q 045642 78 RHVLHIIREEDLSPLTDIVGELKLSAEDDVEDIAEDENSQKSSATTDGCLLKPPLLLAVFEHLPDSAPACQTFSSENIFA 157 (406)
Q Consensus 78 rrvl~~Iree~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~sl~~l~~~~~~~~~~~~~~s~~~~~~ 157 (406)
+|+++.+.+.
T Consensus 117 ~r~~~~~~~~---------------------------------------------------------------------- 126 (211)
T 1w2w_A 117 VEIKNILKSS---------------------------------------------------------------------- 126 (211)
T ss_dssp HHHHHHHHTC----------------------------------------------------------------------
T ss_pred HHHHHHHHhc----------------------------------------------------------------------
Confidence 9998876431
Q ss_pred CcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc------c---cCcEEEeccCh--------HHHHHHHHHHH
Q 045642 158 GKADKSAKKLKSELIKAVNELIEDINTCREGIAEQAMELI------H---QNEVILTLGHS--------KFVKEFLCAAK 220 (406)
Q Consensus 158 ~~~~~~~~~~k~~l~~~i~~~~~e~~~~~~~I~~~a~~~I------~---~g~~ILT~g~S--------~tV~~~L~~A~ 220 (406)
.+.+++++.+++.++.+.+|...++..|+++++++| . +|++||||+++ +|+..+++.|+
T Consensus 127 ----~~~~~~~~~l~~~a~~i~~ed~~~n~~IG~~Ga~lI~~~~~~~~~~dg~~ILTHCNtG~LAT~g~GTALgvIr~a~ 202 (211)
T 1w2w_A 127 ----SDLKAFDGSLYNYVCELIDEDLANNMKMGDNGAKYLIDVLQKDGFKDEFAVLTICNTGSLATSGYGTALGVIRSLW 202 (211)
T ss_dssp ----SSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCSEEEEEECSCCSGGGSSSSCSHHHHHHHHH
T ss_pred ----CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCCCCeEEeECCCchHhhcCcchHHHHHHHHH
Confidence 012557899999999999999999999999999999 7 89999999999 69999999999
Q ss_pred HcCCce
Q 045642 221 EKKRSF 226 (406)
Q Consensus 221 ~~~~~f 226 (406)
++|+.|
T Consensus 203 ~~Gk~~ 208 (211)
T 1w2w_A 203 KDSLAK 208 (211)
T ss_dssp HHHHHH
T ss_pred HcCCcc
Confidence 888765
No 10
>1uj6_A Ribose 5-phosphate isomerase; enzyme-inhibitor complex, riken structural genomics/proteomi initiative, RSGI, structural genomics; HET: A5P; 1.74A {Thermus thermophilus} SCOP: c.124.1.4 d.58.40.1 PDB: 1uj5_A* 1uj4_A*
Probab=98.37 E-value=1.1e-06 Score=82.10 Aligned_cols=118 Identities=12% Similarity=0.210 Sum_probs=88.6
Q ss_pred HHHHHHHHHHHHhcccCcEEEeccChHHHHHHHHHHHHc----CCc-eEEEEecCCCCcchHHHHHHHHhCCCceEEEcc
Q 045642 184 TCREGIAEQAMELIHQNEVILTLGHSKFVKEFLCAAKEK----KRS-FEVFIADGAPKFEGHILAKELDKKGLKAIVITD 258 (406)
Q Consensus 184 ~~~~~I~~~a~~~I~~g~~ILT~g~S~tV~~~L~~A~~~----~~~-f~ViV~EsrP~~eG~~~a~~L~~~GI~vt~I~D 258 (406)
...+.|++.|+++|++|++|.. +.++|+..+++...+. +.+ ++| |+- +...+..|.+.||++..+.+
T Consensus 7 ~~K~~IA~~Aa~~I~dg~~I~L-gsGST~~~~~~~L~~~~~~~~l~~itv-VTn------S~~~a~~l~~~gi~v~~l~~ 78 (227)
T 1uj6_A 7 SYKKEAAHAAIAYVQDGMVVGL-GTGSTARYAVLELARRLREGELKGVVG-VPT------SRATEELAKREGIPLVDLPP 78 (227)
T ss_dssp HHHHHHHHHHHTTCCTTCEEEE-CCSHHHHHHHHHHHHHHHTTSSCSCEE-EES------SHHHHHHHHHTTCCBCCCCT
T ss_pred HHHHHHHHHHHHHCCCCCEEEE-cCCHHHHHHHHHHhhhhhhcCCCCEEE-ECC------cHHHHHHHHhCCCeEEEcCC
Confidence 3456899999999999999995 6667888888777543 214 776 544 36778888889999888732
Q ss_pred hHHHHHhhcCCEEEEcceeEeeCCCcccccchHHHH--HHHhhCCCceEEecCCccccccC
Q 045642 259 SAVFAMISRVNMVIVGVHAVMANGGVIAPAGLHVLA--LAAKKHDVPFVVVASTHELCSLY 317 (406)
Q Consensus 259 sav~~~m~~vd~VllGAdav~~nG~vvnk~GT~~lA--l~Ak~~~vPv~V~aes~K~~~~~ 317 (406)
.++|+.|+|||.|-.++..+...|...+- ++|+. ...+|+++++.||....
T Consensus 79 -------~~~D~af~Gadgvd~~~~~~~~~g~a~~kekiva~~-a~~~ivlaD~sK~~~~l 131 (227)
T 1uj6_A 79 -------EGVDLAIDGADEIAPGLALIKGMGGALLREKIVERV-AKEFIVIADHTKKVPVL 131 (227)
T ss_dssp -------TCEEEEEECCSEEEGGGEEECCTTSCHHHHHHHHHT-EEEEEEEEEGGGBCSSS
T ss_pred -------CcCCEEEECCCccCccccEECCHHHHHHHHHHHHhc-cCCEEEEEEcchhcccc
Confidence 38999999999999988444455555553 44442 56999999999998863
No 11
>3kwm_A Ribose-5-phosphate isomerase A; structural genomics, IDP02119, center for structu genomics of infectious diseases, csgid; 2.32A {Francisella tularensis subsp}
Probab=98.07 E-value=7.6e-06 Score=76.18 Aligned_cols=121 Identities=10% Similarity=0.141 Sum_probs=91.7
Q ss_pred HHHHHHHHHHHHhcccCcEEEeccChHHHHHHHHHHHHcCCceEEEEecCCCCcchHHHHHHHHhCCCceEEEcchHHHH
Q 045642 184 TCREGIAEQAMELIHQNEVILTLGHSKFVKEFLCAAKEKKRSFEVFIADGAPKFEGHILAKELDKKGLKAIVITDSAVFA 263 (406)
Q Consensus 184 ~~~~~I~~~a~~~I~~g~~ILT~g~S~tV~~~L~~A~~~~~~f~ViV~EsrP~~eG~~~a~~L~~~GI~vt~I~Dsav~~ 263 (406)
...+.|++.|+++|++|++|. .|.++|+..+++...+.++++++.|+-| ...+..|.+.||++..+-+
T Consensus 11 ~~K~~iA~~A~~~V~~g~~Ig-lgsGST~~~~i~~L~~~~~~itv~VtnS------~~~a~~l~~~gi~l~~l~~----- 78 (224)
T 3kwm_A 11 ELKKLAATEAAKSITTEITLG-VGTGSTVGFLIEELVNYRDKIKTVVSSS------EDSTRKLKALGFDVVDLNY----- 78 (224)
T ss_dssp HHHHHHHHHHHTTCCSSEEEE-ECCSHHHHHHHHHGGGCTTTEEEEEESC------HHHHHHHHHTTCCBCCHHH-----
T ss_pred HHHHHHHHHHHHhCCCCCEEE-ECCcHHHHHHHHHHHhhcCceEEEECCc------HHHHHHHHHcCCeEEecCc-----
Confidence 345688999999999999887 5888899999998875555777766644 4668888999998775432
Q ss_pred HhhcCCEEEEcceeEeeCCCcccccchHHH-HHHHhhCCCceEEecCCccccccC
Q 045642 264 MISRVNMVIVGVHAVMANGGVIAPAGLHVL-ALAAKKHDVPFVVVASTHELCSLY 317 (406)
Q Consensus 264 ~m~~vd~VllGAdav~~nG~vvnk~GT~~l-Al~Ak~~~vPv~V~aes~K~~~~~ 317 (406)
..++|+.|.|||.|-.+++++---|...+ --+......-||++++.-||.+..
T Consensus 79 -~~~iD~afdGADevd~~~~liKGgg~al~rEKiva~~A~~~iviaD~sK~~~~L 132 (224)
T 3kwm_A 79 -AGEIDLYIDGADECNNHKELIKGGGAALTREKICVAAAKKFICIIDESKKVNTL 132 (224)
T ss_dssp -HCSEEEEEECCSEECTTSCEECCSSSCHHHHHHHHHTEEEEEEEEEGGGBCSSB
T ss_pred -cccccEEEECCCccccccCeecCchhhHHHHHHHHHhcCcEEEEEeCchhhhhc
Confidence 36899999999999999888764443332 233444567899999999998753
No 12
>2f8m_A Ribose 5-phosphate isomerase; structural genomics, PSI, protein structure initiative, STRU genomics of pathogenic protozoa consortium; 2.09A {Plasmodium falciparum}
Probab=98.05 E-value=1.2e-05 Score=75.77 Aligned_cols=121 Identities=16% Similarity=0.198 Sum_probs=93.6
Q ss_pred HHHHHHHHHHHHHH-hcccCcEEEeccChHHHHHHHHHHHHc---CC--ceEEEEecCCCCcchHHHHHHHHhCCCceEE
Q 045642 182 INTCREGIAEQAME-LIHQNEVILTLGHSKFVKEFLCAAKEK---KR--SFEVFIADGAPKFEGHILAKELDKKGLKAIV 255 (406)
Q Consensus 182 ~~~~~~~I~~~a~~-~I~~g~~ILT~g~S~tV~~~L~~A~~~---~~--~f~ViV~EsrP~~eG~~~a~~L~~~GI~vt~ 255 (406)
++...+.|++.|++ +|++|++|. +|.++|+..+++...+. +. +++| |+- +...+..|.+.||++..
T Consensus 9 ~~~~K~~iA~~Aa~~~I~dg~~Ig-LgsGST~~~~~~~L~~~~~~~~l~~itv-VTn------S~~~a~~l~~~gi~v~~ 80 (244)
T 2f8m_A 9 MDSLKKIVAYKAVDEYVQSNMTIG-LGTGSTVFYVLERIDNLLKSGKLKDVVC-IPT------SIDTELKARKLGIPLTT 80 (244)
T ss_dssp HHHHHHHHHHHHHHHHCCTTCEEE-ECCSTTTHHHHHHHHHHHHHTSSCSCEE-EES------SHHHHHHHHHHTCCBCC
T ss_pred hHHHHHHHHHHHHHHhCCCCCEEE-EcChHHHHHHHHHHhhhhhccCCCCEEE-ECC------cHHHHHHHHHCCCeEEE
Confidence 44556789999999 999999988 68888988888887643 21 4665 443 34678888888999887
Q ss_pred EcchHHHHHhhcCCEEEEcceeEeeCCCcccccchHHHHH-HHhhCCCceEEecCCcccc-cc
Q 045642 256 ITDSAVFAMISRVNMVIVGVHAVMANGGVIAPAGLHVLAL-AAKKHDVPFVVVASTHELC-SL 316 (406)
Q Consensus 256 I~Dsav~~~m~~vd~VllGAdav~~nG~vvnk~GT~~lAl-~Ak~~~vPv~V~aes~K~~-~~ 316 (406)
+- .++++|+.|.|||.|-.+++++.--|-..+-- +.-....-+|++++.-||. +.
T Consensus 81 l~------~~~~iD~afdGaDeId~~~glikg~g~Al~kekiva~~A~~~ivlaD~SK~~~~~ 137 (244)
T 2f8m_A 81 LE------KHSNIDITIDGTDEIDLNLNLIKGRGGALVREKLVASSSSLLIIIGDESKLCTNG 137 (244)
T ss_dssp CC------SSCCBSEEEECCSEECTTCCEECCTTSCHHHHHHHHHTBSCEEEEEEGGGBCSSC
T ss_pred ec------ccCcCCEEEECCcccCCCCCcccCHHHHHHHHHHHHHhhCcEEEEEECCcccccc
Confidence 72 34589999999999999988776666666555 3556788999999999999 54
No 13
>1m0s_A Ribose-5-phosphate isomerase A; D-ribose 5-phosphate isomerase, northeast structural genomics consortium, IR21, structural genomics, PSI; HET: CIT; 1.90A {Haemophilus influenzae} SCOP: c.124.1.4 d.58.40.1
Probab=97.95 E-value=1.3e-05 Score=74.43 Aligned_cols=120 Identities=13% Similarity=0.213 Sum_probs=88.2
Q ss_pred HHHHHHHHHHHhcccCcEEEeccChHHHHHHHHHHHHcCCceEEEEecCCCCcchHHHHHHHHhCCCceEEEcchHHHHH
Q 045642 185 CREGIAEQAMELIHQNEVILTLGHSKFVKEFLCAAKEKKRSFEVFIADGAPKFEGHILAKELDKKGLKAIVITDSAVFAM 264 (406)
Q Consensus 185 ~~~~I~~~a~~~I~~g~~ILT~g~S~tV~~~L~~A~~~~~~f~ViV~EsrP~~eG~~~a~~L~~~GI~vt~I~Dsav~~~ 264 (406)
..+.|++.|+++|++|++|. ++.++|+..+.+...+.+.+++|.|+-| ...+..|.+.||++..+- .
T Consensus 6 ~K~~IA~~Aa~~I~dg~~I~-LdsGST~~~la~~L~~~~~~itv~VTnS------~~~a~~l~~~gi~vi~l~------~ 72 (219)
T 1m0s_A 6 MKKLAAQAALQYVKADRIVG-VGSGSTVNCFIEALGTIKDKIQGAVAAS------KESEELLRKQGIEVFNAN------D 72 (219)
T ss_dssp HHHHHHHHHGGGCCTTSEEE-ECCSHHHHHHHHHHHTTGGGSCEEEESS------HHHHHHHHHTTCCBCCGG------G
T ss_pred HHHHHHHHHHHhCCCCCEEE-EcChHHHHHHHHHHhccCCCEEEEECCh------HHHHHHHHhCCCeEEEeC------c
Confidence 45689999999999999998 6888899999988864311576646543 466888888899887652 1
Q ss_pred hhcCCEEEEcceeEeeCCCcccccchHHHH-HHHhhCCCceEEecCCccccccC
Q 045642 265 ISRVNMVIVGVHAVMANGGVIAPAGLHVLA-LAAKKHDVPFVVVASTHELCSLY 317 (406)
Q Consensus 265 m~~vd~VllGAdav~~nG~vvnk~GT~~lA-l~Ak~~~vPv~V~aes~K~~~~~ 317 (406)
+.++|+.++|||.|-.++++..--|-..+- -+......-+|+++++-||....
T Consensus 73 ~~~~D~af~Gadgid~~~g~~~~~~~a~~kekiv~~~A~~~ivlaD~SK~~~~l 126 (219)
T 1m0s_A 73 VSSLDIYVDGADEINPQKMMIKGGGAALTREKIVAALAKKFICIVDSSKQVDVL 126 (219)
T ss_dssp CSCEEEEEECCSEECTTSCEECCTTSCHHHHHHHHHHEEEEEEEEEGGGBCSST
T ss_pred cccCCEEEECcCeECCCCCeecCHHHHHHHHHHHHHhcCcEEEEEeCcHHhhcc
Confidence 258999999999999887766543443333 12223455899999999998754
No 14
>3hhe_A Ribose-5-phosphate isomerase A; niaid, ssgcid, decode, SBRI, UW, STRU genomics, seattle structural genomics center for infectious; HET: 5RP; 2.30A {Bartonella henselae}
Probab=97.95 E-value=2.9e-05 Score=73.46 Aligned_cols=118 Identities=15% Similarity=0.200 Sum_probs=86.2
Q ss_pred HHHHHHHHHHhcccCcEEEeccChHHHHHHHHHHHHc---CCceEEEEecCCCCcchHHHHHHHHhCCCceEEEcchHHH
Q 045642 186 REGIAEQAMELIHQNEVILTLGHSKFVKEFLCAAKEK---KRSFEVFIADGAPKFEGHILAKELDKKGLKAIVITDSAVF 262 (406)
Q Consensus 186 ~~~I~~~a~~~I~~g~~ILT~g~S~tV~~~L~~A~~~---~~~f~ViV~EsrP~~eG~~~a~~L~~~GI~vt~I~Dsav~ 262 (406)
.+.|++.|+++|++|++|. +|.++|+..+++...+. |.++++ |+- +...+..|.+.||++..+-+
T Consensus 28 K~~iA~~A~~~V~dg~vIg-LGsGST~~~~i~~L~~~~~~gl~Itv-Vtt------S~~ta~~l~~~GI~l~~l~~---- 95 (255)
T 3hhe_A 28 KKMAALKALEFVEDDMRLG-IGSGSTVNEFIPLLGERVANGLRVTC-VAT------SQYSEQLCHKFGVPISTLEK---- 95 (255)
T ss_dssp HHHHHHHHHTTCCTTEEEE-ECCSHHHHHHHHHHHHHHHTTCCEEE-EES------SHHHHHHHHHTTCCBCCTTT----
T ss_pred HHHHHHHHHHhCCCCCEEE-ECCcHHHHHHHHHHHHhhccCCcEEE-EcC------CHHHHHHHHHcCCcEEeccc----
Confidence 4678899999999999877 58888999888877643 224442 332 34568888999999876643
Q ss_pred HHhhcCCEEEEcceeEeeCCCcccccch-HHHHHHHhhCCCceEEecCCccccccC
Q 045642 263 AMISRVNMVIVGVHAVMANGGVIAPAGL-HVLALAAKKHDVPFVVVASTHELCSLY 317 (406)
Q Consensus 263 ~~m~~vd~VllGAdav~~nG~vvnk~GT-~~lAl~Ak~~~vPv~V~aes~K~~~~~ 317 (406)
+.++|+.|.|||.|-.+.+++---|. +.---+......-|||+++.-||.+..
T Consensus 96 --~~~iD~afdGADeVD~~~~lIKGgG~al~rEKiva~~A~~~ivIaD~SK~v~~L 149 (255)
T 3hhe_A 96 --IPELDLDIDGADEIGPEMTLIKGGGGALLHEKIVASASRAMFVIADETKMVKTL 149 (255)
T ss_dssp --CCSBSEEEECCSEECGGGCEECCTTSCHHHHHHHHHTBSCEEEEEEGGGBCSSS
T ss_pred --ccccCEEEECCCccccccCeeeCchhhhHHHHHHHHhcCcEEEEEeCCCChhhh
Confidence 35899999999999998877653333 222233345677899999999999854
No 15
>1lk5_A D-ribose-5-phosphate isomerase; alpha/beta structure; 1.75A {Pyrococcus horikoshii} SCOP: c.124.1.4 d.58.40.1 PDB: 1lk7_A*
Probab=97.92 E-value=2.6e-05 Score=72.87 Aligned_cols=120 Identities=15% Similarity=0.176 Sum_probs=88.4
Q ss_pred HHHHHHHHHHHHhcccCcEEEeccChHHHHHHHHHHHHc---CC--ceEEEEecCCCCcchHHHHHHHHhCCCceEEEcc
Q 045642 184 TCREGIAEQAMELIHQNEVILTLGHSKFVKEFLCAAKEK---KR--SFEVFIADGAPKFEGHILAKELDKKGLKAIVITD 258 (406)
Q Consensus 184 ~~~~~I~~~a~~~I~~g~~ILT~g~S~tV~~~L~~A~~~---~~--~f~ViV~EsrP~~eG~~~a~~L~~~GI~vt~I~D 258 (406)
...+.|++.|+++|++|++|. ++.++|+..+.+...+. +. +++| |+- +...+..|.+.||++..+-
T Consensus 5 ~~K~~IA~~Aa~~I~dg~~I~-LdsGST~~~~a~~L~~~~~~~~l~~itv-VTn------S~~~a~~l~~~gi~vi~l~- 75 (229)
T 1lk5_A 5 EMKKIAAKEALKFIEDDMVIG-LGTGSTTAYFIKLLGEKLKRGEISDIVG-VPT------SYQAKLLAIEHDIPIASLD- 75 (229)
T ss_dssp HHHHHHHHHHGGGCCTTCEEE-ECCSHHHHHHHHHHHHHHHTTSSCSCEE-EES------SHHHHHHHHHTTCCBCCGG-
T ss_pred HHHHHHHHHHHHhCCCCCEEE-EcChHHHHHHHHHHhhhhhhccCCCEEE-ECC------cHHHHHHHHhCCCeEEEeC-
Confidence 345689999999999999998 68888999998887643 21 5665 443 3467888888899887652
Q ss_pred hHHHHHhhcCCEEEEcceeEeeCCCcccccchHHHH-HHHhhCCCceEEecCCccccccC
Q 045642 259 SAVFAMISRVNMVIVGVHAVMANGGVIAPAGLHVLA-LAAKKHDVPFVVVASTHELCSLY 317 (406)
Q Consensus 259 sav~~~m~~vd~VllGAdav~~nG~vvnk~GT~~lA-l~Ak~~~vPv~V~aes~K~~~~~ 317 (406)
.+.++|+.|+|||.|-.+++++.--|-..+- -+......-+|+++++-||....
T Consensus 76 -----~~~~~D~af~Gadgid~~~g~~~~~~~a~~kekiv~~~A~~~ivlaD~SK~~~~l 130 (229)
T 1lk5_A 76 -----QVDAIDVAVDGADEVDPNLNLIKGRGAALTMEKIIEYRAGTFIVLVDERKLVDYL 130 (229)
T ss_dssp -----GCSCEEEEEECCSEECTTCCEECCTTSCHHHHHHHHHTEEEEEEEEEGGGBCSST
T ss_pred -----CcccCCEEEECCCeECCCCCeecCHHHHHHHHHHHHHhcCCeEEEEchhhhhhhc
Confidence 1258999999999999887766544444443 22334566899999999998754
No 16
>3l7o_A Ribose-5-phosphate isomerase A; RPIA; 1.70A {Streptococcus mutans}
Probab=97.85 E-value=2.3e-05 Score=73.00 Aligned_cols=119 Identities=12% Similarity=0.132 Sum_probs=87.7
Q ss_pred HHHHHHHHHHHhcccCcEEEeccChHHHHHHHHHHHHc----CCceEEEEecCCCCcchHHHHHHHHhCCCceEEEcchH
Q 045642 185 CREGIAEQAMELIHQNEVILTLGHSKFVKEFLCAAKEK----KRSFEVFIADGAPKFEGHILAKELDKKGLKAIVITDSA 260 (406)
Q Consensus 185 ~~~~I~~~a~~~I~~g~~ILT~g~S~tV~~~L~~A~~~----~~~f~ViV~EsrP~~eG~~~a~~L~~~GI~vt~I~Dsa 260 (406)
..+.|++.|+++|++|++|. .|.++|+..+++...+. +.++++ |+- +...+..|.+.||++..+-+
T Consensus 4 ~K~~iA~~A~~~V~dg~vIg-LGsGST~~~~i~~L~~~~~~~~~~i~~-Vtt------S~~t~~~l~~~Gi~l~~l~~-- 73 (225)
T 3l7o_A 4 LKKIAGVRAAQYVEDGMIVG-LGTGSTAYYFVEEVGRRVQEEGLQVIG-VTT------SSRTTAQAQALGIPLKSIDE-- 73 (225)
T ss_dssp HHHHHHHHHHTTCCTTCEEE-ECCSTTHHHHHHHHHHHHHHHCCCCEE-EES------SHHHHHHHHHHTCCBCCGGG--
T ss_pred HHHHHHHHHHHhCCCCCEEE-ECCcHHHHHHHHHHHHhhhhcCCCEEE-EcC------CHHHHHHHhccCceEEecCc--
Confidence 45678999999999999887 57778888888877643 456665 443 34567888889999876543
Q ss_pred HHHHhhcCCEEEEcceeEeeCCCcccccchHHHH-HHHhhCCCceEEecCCccccccC
Q 045642 261 VFAMISRVNMVIVGVHAVMANGGVIAPAGLHVLA-LAAKKHDVPFVVVASTHELCSLY 317 (406)
Q Consensus 261 v~~~m~~vd~VllGAdav~~nG~vvnk~GT~~lA-l~Ak~~~vPv~V~aes~K~~~~~ 317 (406)
..++|+.|.|||.|-.+.+++---|...+= -+-.....-||++++.-||.+..
T Consensus 74 ----~~~iD~a~dGADevd~~~~liKGgG~al~rEKiva~~A~~~iviaD~sK~~~~L 127 (225)
T 3l7o_A 74 ----VDSVDVTVDGADEVDPNFNGIKGGGGALLMEKIVGTLTKDYIWVVDESKMVDTL 127 (225)
T ss_dssp ----SSCEEEEEECCSEECTTSCEECCTTSCHHHHHHHHHTEEEEEEEEEGGGBCSSS
T ss_pred ----ccccCEEEEcCCccCcccCeecCchhhhHHHHHHHHhCCeEEEEEecccchhhc
Confidence 458999999999999998887644443331 22224566799999999998754
No 17
>1o8b_A Ribose 5-phosphate isomerase; RPIA, PSI, protein ST initiative, MCSG, midwest center for structural genomics; HET: ABF; 1.25A {Escherichia coli} SCOP: c.124.1.4 d.58.40.1 PDB: 1lkz_A 1ks2_A* 3enq_A 3env_A* 3enw_A*
Probab=97.75 E-value=5.2e-06 Score=77.16 Aligned_cols=120 Identities=11% Similarity=0.224 Sum_probs=52.7
Q ss_pred HHHHHHHHHHHhcccCcEEEeccChHHHHHHHHHHHHcCCceEEEEecCCCCcchHHHHHHHHhCCCceEEEcchHHHHH
Q 045642 185 CREGIAEQAMELIHQNEVILTLGHSKFVKEFLCAAKEKKRSFEVFIADGAPKFEGHILAKELDKKGLKAIVITDSAVFAM 264 (406)
Q Consensus 185 ~~~~I~~~a~~~I~~g~~ILT~g~S~tV~~~L~~A~~~~~~f~ViV~EsrP~~eG~~~a~~L~~~GI~vt~I~Dsav~~~ 264 (406)
..+.|++.|+++|++|++|. ++.++|+..+.+...+.+.+++|.|+-|-+- +..|.+.||++..+- .
T Consensus 6 ~K~~IA~~Aa~lI~dg~~I~-LdsGST~~~la~~L~~~~~~itv~VTnS~~~------a~~l~~~gi~vi~l~------~ 72 (219)
T 1o8b_A 6 LKKAVGWAALQYVQPGTIVG-VGTGSTAAHFIDALGTMKGQIEGAVSSSDAS------TEKLKSLGIHVFDLN------E 72 (219)
T ss_dssp -----------------CEE-ECCSCC---------------CCEEESCCC------------------CCGG------G
T ss_pred HHHHHHHHHHHhCCCCCEEE-EcChHHHHHHHHHHhccCCCEEEEECCcHHH------HHHHHhCCCeEEEeC------c
Confidence 34678999999999999998 6888888888887763321566556666543 566666788776552 1
Q ss_pred hhcCCEEEEcceeEeeCCCcccccchHHHH-HHHhhCCCceEEecCCccccccC
Q 045642 265 ISRVNMVIVGVHAVMANGGVIAPAGLHVLA-LAAKKHDVPFVVVASTHELCSLY 317 (406)
Q Consensus 265 m~~vd~VllGAdav~~nG~vvnk~GT~~lA-l~Ak~~~vPv~V~aes~K~~~~~ 317 (406)
+.++|+.++|||.|-.++++..--|-..+- -+......-+|+++++-||....
T Consensus 73 ~~~~D~af~Gadgid~~~~~~~~~~~a~~kekiv~~~A~~~ivlaD~SK~~~~l 126 (219)
T 1o8b_A 73 VDSLGIYVDGADEINGHMQMIKGGGAALTREKIIASVAEKFICIADASKQVDIL 126 (219)
T ss_dssp CSCEEEEEECCSEECTTSCEECCCCC-HHHHHHHHHHEEEEEEEEEGGGBCSSB
T ss_pred cCcCCEEEECcceECCCCCeecCHHHHHHHHHHHHHhcCcEEEEEeCccccccc
Confidence 258999999999999888776443444443 22233445899999999998753
No 18
>2pjm_A Ribose-5-phosphate isomerase A; 3D-structure, structural genomics, pentose phosphate pathway, carbon fixation, NPPSFA; 1.78A {Methanocaldococcus jannaschii} PDB: 3ixq_A*
Probab=97.70 E-value=0.00011 Score=68.45 Aligned_cols=119 Identities=15% Similarity=0.140 Sum_probs=84.8
Q ss_pred HHHHHHHHHHHHhcccCcEEEeccChHHHHHHHHHHHHc----CCceEEEEecCCCCcchHHHHHHHHhCCCceEEEcch
Q 045642 184 TCREGIAEQAMELIHQNEVILTLGHSKFVKEFLCAAKEK----KRSFEVFIADGAPKFEGHILAKELDKKGLKAIVITDS 259 (406)
Q Consensus 184 ~~~~~I~~~a~~~I~~g~~ILT~g~S~tV~~~L~~A~~~----~~~f~ViV~EsrP~~eG~~~a~~L~~~GI~vt~I~Ds 259 (406)
.....|++.|+++|++|++|. +|.++|+..+++...+. +.++++ |+- +...+..|.+.||++.-+.+
T Consensus 5 ~~K~~iA~~A~~~I~~g~~Ig-lgsGST~~~~~~~L~~~~~~~~l~itv-Vtn------S~~~a~~l~~~gi~v~~l~~- 75 (226)
T 2pjm_A 5 DLKLKVAKEAVKLVKDGMVIG-LGTGSTAALFIRELGNRIREEELTVFG-IPT------SFEAKMLAMQYEIPLVTLDE- 75 (226)
T ss_dssp HHHHHHHHHHGGGCCTTCEEE-ECCSHHHHHHHHHHHHHHHHHTCCCEE-EES------SHHHHHHHHHTTCCBCCTTT-
T ss_pred HHHHHHHHHHHHHCCCCCEEE-ECCCHHHHHHHHHHHhhhhccCCcEEE-EeC------cHHHHHHHHhcCCeEEeecc-
Confidence 445689999999999999888 57788888888777643 224553 332 34567888999998774322
Q ss_pred HHHHHhhcCCEEEEcceeEeeC-CCcccccchHHH-HHHHhhCCCceEEecCCccccccC
Q 045642 260 AVFAMISRVNMVIVGVHAVMAN-GGVIAPAGLHVL-ALAAKKHDVPFVVVASTHELCSLY 317 (406)
Q Consensus 260 av~~~m~~vd~VllGAdav~~n-G~vvnk~GT~~l-Al~Ak~~~vPv~V~aes~K~~~~~ 317 (406)
++ +|+.|.|||.|-.+ ++++---|...+ --+......-|+++++.-||.+..
T Consensus 76 -----~~-iD~afdGaDevd~~t~~likGgg~al~rEKiva~~A~~~IviaD~sK~~~~L 129 (226)
T 2pjm_A 76 -----YD-VDIAFDGADEVEETTLFLIKGGGGCHTQEKIVDYNANEFVVLVDESKLVKKL 129 (226)
T ss_dssp -----CC-CSEEEECCSEEETTTCCEECCTTSCHHHHHHHHHHSSEEEEEEEGGGEESST
T ss_pred -----cc-CCEEEEcCceeccccCceeeccchhhHHHHHHHHHhCcEEEEEecchhhhcc
Confidence 34 99999999999999 777654443222 222234466799999999999854
No 19
>1xtz_A Ribose-5-phosphate isomerase; yeast; 2.10A {Saccharomyces cerevisiae}
Probab=97.67 E-value=6.7e-05 Score=71.45 Aligned_cols=117 Identities=17% Similarity=0.215 Sum_probs=88.1
Q ss_pred HHHHHHHHHHHH-hcc--cCcEEEeccChHHHHHHHHHHHHc---CC------ceEEEEecCCCCcchHHHHHHHHhCCC
Q 045642 184 TCREGIAEQAME-LIH--QNEVILTLGHSKFVKEFLCAAKEK---KR------SFEVFIADGAPKFEGHILAKELDKKGL 251 (406)
Q Consensus 184 ~~~~~I~~~a~~-~I~--~g~~ILT~g~S~tV~~~L~~A~~~---~~------~f~ViV~EsrP~~eG~~~a~~L~~~GI 251 (406)
...+.|++.|++ +|. +|++|. +|.++|+..+.+...+. +. +++| |+- +...+..|.+.||
T Consensus 20 ~~K~~IA~~Aa~~~I~~~dg~~Ig-LgsGST~~~~a~~L~~~~~~~~l~~~~~~itv-VTn------S~~~a~~l~~~gi 91 (264)
T 1xtz_A 20 DAKRAAAYRAVDENLKFDDHKIIG-IGSGSTVVYVAERIGQYLHDPKFYEVASKFIC-IPT------GFQSRNLILDNKL 91 (264)
T ss_dssp HHHHHHHHHHHHHHCCTTTCCEEE-ECCCSSTHHHHHHHHHHHTSTTTHHHHTTCEE-EES------SHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHhccCCCCCCEEE-EcChHHHHHHHHHHhHhhhccccccccCCEEE-ECC------cHHHHHHHHHCCC
Confidence 345688999998 999 999988 68888888888887643 21 3555 443 3467888888899
Q ss_pred ceEEEcchHHHHHhhcCCEEEEcceeEeeCCCcccccchHHHHH-HHhhCCCceEEecCCcccc
Q 045642 252 KAIVITDSAVFAMISRVNMVIVGVHAVMANGGVIAPAGLHVLAL-AAKKHDVPFVVVASTHELC 314 (406)
Q Consensus 252 ~vt~I~Dsav~~~m~~vd~VllGAdav~~nG~vvnk~GT~~lAl-~Ak~~~vPv~V~aes~K~~ 314 (406)
++..+ + .+.++|+.|+|||.|-.+++++.--|-..+-- +......-|||++++-||.
T Consensus 92 ~v~~l-~-----~~~~iD~afdGADgId~~~~likg~g~A~~kekiva~~A~~~IvlaD~SK~~ 149 (264)
T 1xtz_A 92 QLGSI-E-----QYPRIDIAFDGADEVDENLQLIKGGGACLFQEKLVSTSAKTFIVVADSRKKS 149 (264)
T ss_dssp EECCT-T-----TCCSEEEEEECCSEECTTSCEECCTTSCHHHHHHHHTTEEEEEEEEEGGGBC
T ss_pred eEEEe-h-----hcCcCCEEEECCcccCCCCCeecCHHHHHHHHHHHHHhhCcEEEEEEccccc
Confidence 87766 2 22589999999999999887776655555444 2445777999999999999
No 20
>3uw1_A Ribose-5-phosphate isomerase A; ssgcid, seattle structural genomics center for infectious DI isomerase, ribose isomerase; HET: R5P; 1.71A {Burkholderia thailandensis} PDB: 3u7j_A*
Probab=97.49 E-value=0.0002 Score=67.12 Aligned_cols=119 Identities=15% Similarity=0.252 Sum_probs=85.2
Q ss_pred HHHHHHHHHHhccc----CcEEEeccChHHHHHHHHHHHHcCCceEEEEecCCCCcchHHHHHHHHhCCCceEEEcchHH
Q 045642 186 REGIAEQAMELIHQ----NEVILTLGHSKFVKEFLCAAKEKKRSFEVFIADGAPKFEGHILAKELDKKGLKAIVITDSAV 261 (406)
Q Consensus 186 ~~~I~~~a~~~I~~----g~~ILT~g~S~tV~~~L~~A~~~~~~f~ViV~EsrP~~eG~~~a~~L~~~GI~vt~I~Dsav 261 (406)
.+.+++.|+++|.+ |++|- .|..+|+..+++...+..++++..|+- +...+..|.+.||++..+-+
T Consensus 15 K~~aA~~A~~~V~d~~~~g~vIG-LGtGST~~~~i~~L~~~~~~i~~~V~t------S~~t~~~~~~~Gi~l~~l~~--- 84 (239)
T 3uw1_A 15 KRLVGEAAARYVTDNVPQGAVIG-VGTGSTANCFIDALAAVKDRYRGAVSS------SVATTERLKSHGIRVFDLNE--- 84 (239)
T ss_dssp HHHHHHHHHHHHHHHSCTTCEEE-ECCSHHHHHHHHHHHTTGGGSCEEEES------SHHHHHHHHHTTCCBCCGGG---
T ss_pred HHHHHHHHHHHhhccCcCCCEEE-ECccHHHHHHHHHHHhhhccceEEeCC------cHHHHHHHHHcCCcEEeccc---
Confidence 35677778888887 98777 588889999999887544455544543 35778889999999875433
Q ss_pred HHHhhcCCEEEEcceeEeeCCCcccccch-HHHHHHHhhCCCceEEecCCccccccC
Q 045642 262 FAMISRVNMVIVGVHAVMANGGVIAPAGL-HVLALAAKKHDVPFVVVASTHELCSLY 317 (406)
Q Consensus 262 ~~~m~~vd~VllGAdav~~nG~vvnk~GT-~~lAl~Ak~~~vPv~V~aes~K~~~~~ 317 (406)
..++|+.|.|||.|-.++.++---|. +.-=-+......-|||+++.-||.+..
T Consensus 85 ---~~~iD~a~DGADeVd~~l~lIKGgGgal~rEKiva~~A~~~ivIaD~sK~v~~L 138 (239)
T 3uw1_A 85 ---IESLQVYVDGADEIDESGAMIKGGGGALTREKIVASVAETFVCIADASKRVAML 138 (239)
T ss_dssp ---CSCEEEEEECCSEECTTCCEECCSSSCHHHHHHHHHHEEEEEEEEEGGGBCSSB
T ss_pred ---ccccCEEEECCcccCcccCEecCchHHHHHHHHHHHhCCcEEEEEecchhhhhc
Confidence 25899999999999998877653333 222223333455789999999998754
No 21
>4gmk_A Ribose-5-phosphate isomerase A; D-ribose-5-phosphate isomerase family, ribose 5-phosphate isomerisation; 1.72A {Lactobacillus salivarius}
Probab=94.65 E-value=0.078 Score=49.11 Aligned_cols=117 Identities=14% Similarity=0.201 Sum_probs=83.5
Q ss_pred HHHHHHHHHHHhcccCcEEEeccChHHHHHHHHHHHHcC--CceEEEEecCCCCcchHHHHHHHHhCCCceEEEcchHHH
Q 045642 185 CREGIAEQAMELIHQNEVILTLGHSKFVKEFLCAAKEKK--RSFEVFIADGAPKFEGHILAKELDKKGLKAIVITDSAVF 262 (406)
Q Consensus 185 ~~~~I~~~a~~~I~~g~~ILT~g~S~tV~~~L~~A~~~~--~~f~ViV~EsrP~~eG~~~a~~L~~~GI~vt~I~Dsav~ 262 (406)
..+..+..|+++|++|.+|- +|..+|+..|++...+.. ..+.+..+-| ...++..+.+.||++.-+.+
T Consensus 7 ~K~~aa~~A~~~V~~gmvvG-lGTGSTv~~~i~~L~~~~~~~~l~i~~V~t-----S~~t~~~a~~~Gi~l~~l~~---- 76 (228)
T 4gmk_A 7 LKQLVGTKAVEWIKDGMIVG-LGTGSTVKYMVDALGKRVNEEGLDIVGVTT-----SIRTAEQAKSLGIVIKDIDE---- 76 (228)
T ss_dssp HHHHHHHHHGGGCCTTCEEE-ECCSHHHHHHHHHHHHHHHHHCCCCEEEES-----SHHHHHHHHHTTCCBCCGGG----
T ss_pred HHHHHHHHHHHhCCCCCEEE-ECchHHHHHHHHHHHHHHhhcCCcEEEEeC-----cHHHHHHHHHcCCceeChHH----
Confidence 34567888999999997554 788889999998876431 1223333322 24667788889999887665
Q ss_pred HHhhcCCEEEEcceeEeeCCCcccccchH-----HHHHHHhhCCCceEEecCCccccccC
Q 045642 263 AMISRVNMVIVGVHAVMANGGVIAPAGLH-----VLALAAKKHDVPFVVVASTHELCSLY 317 (406)
Q Consensus 263 ~~m~~vd~VllGAdav~~nG~vvnk~GT~-----~lAl~Ak~~~vPv~V~aes~K~~~~~ 317 (406)
..++|..|=|||-|-.|..++--=|.. .+|.+|+ .|+|+++.-|+.+..
T Consensus 77 --~~~iD~~iDGADEvd~~l~lIKGGGgal~rEKivA~~a~----~fI~IaD~sK~v~~L 130 (228)
T 4gmk_A 77 --VDHIDLTIDGADEISSDFQGIKGGGAALLYEKIVATKSN----KNMWIVDESKMVDDL 130 (228)
T ss_dssp --SSCEEEEEECCSEECTTSCEECCTTSCHHHHHHHHHHEE----EEEEEEEGGGBCSSS
T ss_pred --CCccceEeccHHHhhhchhhhhcchHHHHHHHHHHHhhh----heEEEeccccccCcc
Confidence 458999999999999988777544432 3444544 489999999998854
No 22
>3ixq_A Ribose-5-phosphate isomerase A; structural genomics, pentose phosphate pathway, carbon fixation, NPPSFA; HET: PGO; 1.78A {Methanocaldococcus jannaschii}
Probab=91.02 E-value=0.9 Score=41.92 Aligned_cols=118 Identities=17% Similarity=0.187 Sum_probs=76.6
Q ss_pred HHHHHHHHHHhcccCcEEEeccChHHHHHHHHHHHHcC--CceEEEEecCCCCcchHHHHHHHHhCCCceEEEcchHHHH
Q 045642 186 REGIAEQAMELIHQNEVILTLGHSKFVKEFLCAAKEKK--RSFEVFIADGAPKFEGHILAKELDKKGLKAIVITDSAVFA 263 (406)
Q Consensus 186 ~~~I~~~a~~~I~~g~~ILT~g~S~tV~~~L~~A~~~~--~~f~ViV~EsrP~~eG~~~a~~L~~~GI~vt~I~Dsav~~ 263 (406)
.+.+++.|+++|++|.+|- .|..+|+..|++...++. ....|..+.+. ..++..+.+.||+++.+.+
T Consensus 7 K~~aa~~A~~~V~~gmvvG-lGTGSTv~~~I~~L~~~~~~~~l~i~~v~tS-----~~t~~~a~~~gi~l~~l~~----- 75 (226)
T 3ixq_A 7 KLKVAKEAVKLVKDGMVIG-LGTGSTAALFIRELGNRIREEELTVFGIPTS-----FEAKMLAMQYEIPLVTLDE----- 75 (226)
T ss_dssp HHHHHHHHGGGCCTTCEEE-ECCSHHHHHHHHHHHHHHHHHTCCCEEEESS-----HHHHHHHHHTTCCBCCTTT-----
T ss_pred HHHHHHHHHHhCCCCCEEE-eCcHHHHHHHHHHHHHhhhhcCCeeEeeccc-----HHHHHHHHhcCCCcccccc-----
Confidence 4567888999999998654 788889999998876431 12344444332 3456666778999876544
Q ss_pred HhhcCCEEEEcceeEee-CCCcccccch-HHHHHHHhhCCCceEEecCCcccccc
Q 045642 264 MISRVNMVIVGVHAVMA-NGGVIAPAGL-HVLALAAKKHDVPFVVVASTHELCSL 316 (406)
Q Consensus 264 ~m~~vd~VllGAdav~~-nG~vvnk~GT-~~lAl~Ak~~~vPv~V~aes~K~~~~ 316 (406)
. .+|..|=|||-|-. +=.++--=|. +.-==.-......|+|+++.-|+.+.
T Consensus 76 -~-~iDl~iDGADEvd~~~l~lIKGGGgAl~rEKivA~~a~~~I~I~D~sK~v~~ 128 (226)
T 3ixq_A 76 -Y-DVDIAFDGADEVEETTLFLIKGGGGCHTQEKIVDYNANEFVVLVDESKLVKK 128 (226)
T ss_dssp -C-CCSEEEECCSEEETTTCCEECCTTSCHHHHHHHHHHSSEEEEEEEGGGEESS
T ss_pred -c-cccEEEeCcchhccccceEEecchHHHHHHHHHHHHhhheEEEeccccchhh
Confidence 1 38999999999964 3233332222 22111222345668999999999875
No 23
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=86.97 E-value=1.2 Score=39.96 Aligned_cols=99 Identities=19% Similarity=0.219 Sum_probs=60.5
Q ss_pred cCcEEEeccChHHHHHHHHHH-HHcCCceEEEEecCCCCcchHHHHHHHHhCCCceEEEcchH--HHHHhhcCCEEEEcc
Q 045642 199 QNEVILTLGHSKFVKEFLCAA-KEKKRSFEVFIADGAPKFEGHILAKELDKKGLKAIVITDSA--VFAMISRVNMVIVGV 275 (406)
Q Consensus 199 ~g~~ILT~g~S~tV~~~L~~A-~~~~~~f~ViV~EsrP~~eG~~~a~~L~~~GI~vt~I~Dsa--v~~~m~~vd~VllGA 275 (406)
.|.+||..|.++.+=..|... .++ ..+|+++.-+|.. +..|...|+...+..|-. +...+.++|.||
T Consensus 20 ~~~~ilVtGatG~iG~~l~~~L~~~--G~~V~~~~R~~~~-----~~~~~~~~~~~~~~~Dl~~~~~~~~~~~D~vi--- 89 (236)
T 3e8x_A 20 QGMRVLVVGANGKVARYLLSELKNK--GHEPVAMVRNEEQ-----GPELRERGASDIVVANLEEDFSHAFASIDAVV--- 89 (236)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESSGGG-----HHHHHHTTCSEEEECCTTSCCGGGGTTCSEEE---
T ss_pred CCCeEEEECCCChHHHHHHHHHHhC--CCeEEEEECChHH-----HHHHHhCCCceEEEcccHHHHHHHHcCCCEEE---
Confidence 467888889887776655444 333 4678877655432 344555677223344532 233344455544
Q ss_pred eeEeeCCCcc-----------cccchHHHHHHHhhCCCceEEecCCc
Q 045642 276 HAVMANGGVI-----------APAGLHVLALAAKKHDVPFVVVASTH 311 (406)
Q Consensus 276 dav~~nG~vv-----------nk~GT~~lAl~Ak~~~vPv~V~aes~ 311 (406)
.+.+.. |-.|+..+.-+|+..+++-+|...++
T Consensus 90 ----~~ag~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~ 132 (236)
T 3e8x_A 90 ----FAAGSGPHTGADKTILIDLWGAIKTIQEAEKRGIKRFIMVSSV 132 (236)
T ss_dssp ----ECCCCCTTSCHHHHHHTTTHHHHHHHHHHHHHTCCEEEEECCT
T ss_pred ----ECCCCCCCCCccccchhhHHHHHHHHHHHHHcCCCEEEEEecC
Confidence 444433 67899999999999998877776664
No 24
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=86.22 E-value=3.2 Score=39.43 Aligned_cols=102 Identities=16% Similarity=0.182 Sum_probs=67.4
Q ss_pred CcEEEeccChHHHHHHHHHHH-HcCCceEEEEecCCCCc--chHHHHHHHHhCCCceEEE--cc-hHHHHHhhcCCEEEE
Q 045642 200 NEVILTLGHSKFVKEFLCAAK-EKKRSFEVFIADGAPKF--EGHILAKELDKKGLKAIVI--TD-SAVFAMISRVNMVIV 273 (406)
Q Consensus 200 g~~ILT~g~S~tV~~~L~~A~-~~~~~f~ViV~EsrP~~--eG~~~a~~L~~~GI~vt~I--~D-sav~~~m~~vd~Vll 273 (406)
+.+||..|.++.+=..|..+. +.| .+|+++.-.+.. +.......|...|+.+... .| .++..++.+.
T Consensus 10 ~~~IlVtGatG~iG~~l~~~L~~~g--~~V~~l~R~~~~~~~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~----- 82 (346)
T 3i6i_A 10 KGRVLIAGATGFIGQFVATASLDAH--RPTYILARPGPRSPSKAKIFKALEDKGAIIVYGLINEQEAMEKILKEH----- 82 (346)
T ss_dssp -CCEEEECTTSHHHHHHHHHHHHTT--CCEEEEECSSCCCHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHHHT-----
T ss_pred CCeEEEECCCcHHHHHHHHHHHHCC--CCEEEEECCCCCChhHHHHHHHHHhCCcEEEEeecCCHHHHHHHHhhC-----
Confidence 347888898777766555443 344 677777655522 2234456777788776543 22 3456666632
Q ss_pred cceeEeeCCCcccccchHHHHHHHhhCC-CceEEec
Q 045642 274 GVHAVMANGGVIAPAGLHVLALAAKKHD-VPFVVVA 308 (406)
Q Consensus 274 GAdav~~nG~vvnk~GT~~lAl~Ak~~~-vPv~V~a 308 (406)
|+|.|+.+.+..|-.|+..+.-+|+..+ ++.+|.+
T Consensus 83 ~~d~Vi~~a~~~n~~~~~~l~~aa~~~g~v~~~v~S 118 (346)
T 3i6i_A 83 EIDIVVSTVGGESILDQIALVKAMKAVGTIKRFLPS 118 (346)
T ss_dssp TCCEEEECCCGGGGGGHHHHHHHHHHHCCCSEEECS
T ss_pred CCCEEEECCchhhHHHHHHHHHHHHHcCCceEEeec
Confidence 5555666666779999999999999999 9988864
No 25
>1x92_A APC5045, phosphoheptose isomerase; midwest centre for structural genomics, SIS domain, A/B protein, lipopolysaccharide biosynthesis, PSI; HET: M7P; 2.30A {Pseudomonas aeruginosa} SCOP: c.80.1.3 PDB: 3bjz_A
Probab=85.09 E-value=11 Score=32.94 Aligned_cols=36 Identities=11% Similarity=-0.013 Sum_probs=29.3
Q ss_pred HHHHHHHHhCCCceEEEcchHHHHHhhc---CCEEEEcc
Q 045642 240 HILAKELDKKGLKAIVITDSAVFAMISR---VNMVIVGV 275 (406)
Q Consensus 240 ~~~a~~L~~~GI~vt~I~Dsav~~~m~~---vd~VllGA 275 (406)
...++.+++.|+++..|++..-..+.+. +|.+|.-.
T Consensus 130 i~~~~~ak~~g~~vI~IT~~~~s~La~~~~~ad~~l~~~ 168 (199)
T 1x92_A 130 IQAIQAAHDREMLVVALTGRDGGGMASLLLPEDVEIRVP 168 (199)
T ss_dssp HHHHHHHHHTTCEEEEEECTTCHHHHHHCCTTCEEEECS
T ss_pred HHHHHHHHHCCCEEEEEECCCCCcHHhccccCCEEEEeC
Confidence 5778888999999999999776777677 88887643
No 26
>4dq6_A Putative pyridoxal phosphate-dependent transferas; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: PLP; 1.50A {Clostridium difficile} PDB: 4dgt_A*
Probab=83.75 E-value=7.5 Score=36.90 Aligned_cols=114 Identities=13% Similarity=0.112 Sum_probs=61.5
Q ss_pred HHHHHHHHHHhc----ccCcEEEeccChHHHHHHHHHHHHcCCceEEEEecCCCCcchHHHHHHHHhCCCceEEEcch--
Q 045642 186 REGIAEQAMELI----HQNEVILTLGHSKFVKEFLCAAKEKKRSFEVFIADGAPKFEGHILAKELDKKGLKAIVITDS-- 259 (406)
Q Consensus 186 ~~~I~~~a~~~I----~~g~~ILT~g~S~tV~~~L~~A~~~~~~f~ViV~EsrP~~eG~~~a~~L~~~GI~vt~I~Ds-- 259 (406)
.+.+++...++. ....+++|.|.+..+..++..+.+.| -+|++. .|.+.|... .+...|.++..++-.
T Consensus 73 ~~~l~~~l~~~~g~~~~~~~v~~~~g~~~a~~~~~~~~~~~g--d~vl~~--~~~~~~~~~--~~~~~g~~~~~~~~~~~ 146 (391)
T 4dq6_A 73 NESIVNWLYRRHNWKIKSEWLIYSPGVIPAISLLINELTKAN--DKIMIQ--EPVYSPFNS--VVKNNNRELIISPLQKL 146 (391)
T ss_dssp HHHHHHHHHHHHCCCCCGGGEEEESCHHHHHHHHHHHHSCTT--CEEEEC--SSCCTHHHH--HHHHTTCEEEECCCEEC
T ss_pred HHHHHHHHHHHhCCCCcHHHeEEcCChHHHHHHHHHHhCCCC--CEEEEc--CCCCHHHHH--HHHHcCCeEEeeeeeec
Confidence 344444444443 34567888777777777776664333 355554 477777433 334568877766422
Q ss_pred ----------HHHHHhhcCCEEEEcceeEeeCCCcccccchHHHHHHHhhCCCceEE
Q 045642 260 ----------AVFAMISRVNMVIVGVHAVMANGGVIAPAGLHVLALAAKKHDVPFVV 306 (406)
Q Consensus 260 ----------av~~~m~~vd~VllGAdav~~nG~vvnk~GT~~lAl~Ak~~~vPv~V 306 (406)
.+-..+.+ .++++-.+.--+.|.++...--..++-.|+++++++++
T Consensus 147 ~~~~~~~d~~~l~~~l~~-~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~ 202 (391)
T 4dq6_A 147 ENGNYIMDYEDIENKIKD-VKLFILCNPHNPVGRVWTKDELKKLGDICLKHNVKIIS 202 (391)
T ss_dssp TTSCEECCHHHHHHHCTT-EEEEEEESSBTTTTBCCCHHHHHHHHHHHHHTTCEEEE
T ss_pred CCCceEeeHHHHHHHhhc-CCEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCCEEEe
Confidence 33334444 34333222212233333333344566779999998886
No 27
>2yva_A DNAA initiator-associating protein DIAA; intermolecular disulfide bonding, putative phosphosugar BIND protein, DNAA binding protein; 1.85A {Escherichia coli}
Probab=83.75 E-value=14 Score=32.04 Aligned_cols=105 Identities=11% Similarity=0.040 Sum_probs=60.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcEEEecc--ChHHHHHHHHHHHHc-----CCceEEEEec----------
Q 045642 170 ELIKAVNELIEDINTCREGIAEQAMELIHQNEVILTLG--HSKFVKEFLCAAKEK-----KRSFEVFIAD---------- 232 (406)
Q Consensus 170 ~l~~~i~~~~~e~~~~~~~I~~~a~~~I~~g~~ILT~g--~S~tV~~~L~~A~~~-----~~~f~ViV~E---------- 232 (406)
..++.+++..+.++...+...+.+++.|.++..|..+| .|..+...+...... ...+.++...
T Consensus 11 ~~~~~l~~t~~~l~~~i~~~~~~~~~~i~~a~~I~i~G~G~S~~~A~~~~~~l~~~~~~~~~g~~~~~~~~~~~~~~a~~ 90 (196)
T 2yva_A 11 ESIQTQIAAAEALPDAISRAAMTLVQSLLNGNKILCCGNGTSAANAQHFAASMINRFETERPSLPAIALNTDNVVLTAIA 90 (196)
T ss_dssp HHHHHHHHHHHHSHHHHHHHHHHHHHHHHTTCCEEEEESTHHHHHHHHHHHHHHTCSSSCCCCCCEEESSCCHHHHHHHT
T ss_pred HHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCEEEEEeCchhhHHHHHHHHHHhccccccCCCCceEeecCchHHHHHHh
Confidence 33344444444433333355566677777777777765 455555555443321 1223344332
Q ss_pred --------------------------CCCCc--chHHHHHHHHhCCCceEEEcchHHHHHhhc---CCEEEEc
Q 045642 233 --------------------------GAPKF--EGHILAKELDKKGLKAIVITDSAVFAMISR---VNMVIVG 274 (406)
Q Consensus 233 --------------------------srP~~--eG~~~a~~L~~~GI~vt~I~Dsav~~~m~~---vd~VllG 274 (406)
|..+. +-...++.+++.|+++..|++..-+.+.+. +|.+|.-
T Consensus 91 ~d~~~~~~~~~~~~~~~~~~DvvI~iS~SG~t~~~i~~~~~ak~~g~~vI~IT~~~~s~la~~~~~ad~~l~~ 163 (196)
T 2yva_A 91 NDRLHDEVYAKQVRALGHAGDVLLAISTRGNSRDIVKAVEAAVTRDMTIVALTGYDGGELAGLLGPQDVEIRI 163 (196)
T ss_dssp TSTTGGGHHHHHHHHHCCTTCEEEEECSSSCCHHHHHHHHHHHHTTCEEEEEECTTCHHHHTTCCTTSEEEEC
T ss_pred cCCCHHHHHHHHHHhcCCCCCEEEEEeCCCCCHHHHHHHHHHHHCCCEEEEEeCCCCchhhhcccCCCEEEEe
Confidence 11111 124678888899999999999876666666 8887764
No 28
>1vim_A Hypothetical protein AF1796; structural genomics, unknown function; 1.36A {Archaeoglobus fulgidus} SCOP: c.80.1.3
Probab=83.66 E-value=7.9 Score=34.07 Aligned_cols=107 Identities=13% Similarity=0.195 Sum_probs=62.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcEEEeccC--hHHHHHHHHHHH-HcCCce--------------E
Q 045642 165 KKLKSELIKAVNELIEDINTCREGIAEQAMELIHQNEVILTLGH--SKFVKEFLCAAK-EKKRSF--------------E 227 (406)
Q Consensus 165 ~~~k~~l~~~i~~~~~e~~~~~~~I~~~a~~~I~~g~~ILT~g~--S~tV~~~L~~A~-~~~~~f--------------~ 227 (406)
.+..+..++.+++..+.+. +.-.+.+++.|.+...|..+|. |..+...+..-. .-|+.. .
T Consensus 15 ~~~~~~~~~~i~~t~~~l~---~~~l~~~~~~i~~a~~I~i~G~G~S~~~A~~~~~~l~~~g~~~~~~~~~~~~~~~~~D 91 (200)
T 1vim_A 15 LRFLEVVSEHIKNLRNHID---LETVGEMIKLIDSARSIFVIGAGRSGYIAKAFAMRLMHLGYTVYVVGETVTPRITDQD 91 (200)
T ss_dssp HHHHHHHHHHHHHHHHHCC---HHHHHHHHHHHHHSSCEEEECSHHHHHHHHHHHHHHHHTTCCEEETTSTTCCCCCTTC
T ss_pred HHHHHHHHHHHHHHHHhcC---HHHHHHHHHHHhcCCEEEEEEecHHHHHHHHHHHHHHhcCCeEEEeCCccccCCCCCC
Confidence 3444555555555554432 2233455566666677777664 555554443332 223221 2
Q ss_pred EEEecCCCCc--chHHHHHHHHhCCCceEEEcchHHHHHhhcCCEEEEc
Q 045642 228 VFIADGAPKF--EGHILAKELDKKGLKAIVITDSAVFAMISRVNMVIVG 274 (406)
Q Consensus 228 ViV~EsrP~~--eG~~~a~~L~~~GI~vt~I~Dsav~~~m~~vd~VllG 274 (406)
|+++=|..+. +-..+++.+++.|+++..|++..-..+.+.+|.+|.-
T Consensus 92 vvI~iS~SG~t~~~i~~~~~ak~~g~~vI~IT~~~~s~La~~ad~~l~~ 140 (200)
T 1vim_A 92 VLVGISGSGETTSVVNISKKAKDIGSKLVAVTGKRDSSLAKMADVVMVV 140 (200)
T ss_dssp EEEEECSSSCCHHHHHHHHHHHHHTCEEEEEESCTTSHHHHHCSEEEEC
T ss_pred EEEEEeCCCCcHHHHHHHHHHHHCCCeEEEEECCCCChHHHhCCEEEEE
Confidence 2233333322 3357888999999999999998777777889988863
No 29
>1m3s_A Hypothetical protein YCKF; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.95A {Bacillus subtilis} SCOP: c.80.1.3 PDB: 1viv_A
Probab=83.04 E-value=7.5 Score=33.45 Aligned_cols=85 Identities=13% Similarity=0.039 Sum_probs=51.2
Q ss_pred HHHHHHhcccCcEEEeccC--hHHHHHHHHHHH-HcCCce--------------EEEEecCCCC--cchHHHHHHHHhCC
Q 045642 190 AEQAMELIHQNEVILTLGH--SKFVKEFLCAAK-EKKRSF--------------EVFIADGAPK--FEGHILAKELDKKG 250 (406)
Q Consensus 190 ~~~a~~~I~~g~~ILT~g~--S~tV~~~L~~A~-~~~~~f--------------~ViV~EsrP~--~eG~~~a~~L~~~G 250 (406)
.+.+++.|.+...|..+|. |..+...+.... +-|.+. .|+++=|..+ .+-...++.+.+.|
T Consensus 27 i~~~~~~i~~a~~I~i~G~G~S~~~A~~~~~~l~~~g~~~~~~~~~~~~~~~~~d~vI~iS~sG~t~~~~~~~~~ak~~g 106 (186)
T 1m3s_A 27 ADQLADHILSSHQIFTAGAGRSGLMAKSFAMRLMHMGFNAHIVGEILTPPLAEGDLVIIGSGSGETKSLIHTAAKAKSLH 106 (186)
T ss_dssp HHHHHHHHHHCSCEEEECSHHHHHHHHHHHHHHHHTTCCEEETTSTTCCCCCTTCEEEEECSSSCCHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHcCCeEEEEecCHHHHHHHHHHHHHHhcCCeEEEeCcccccCCCCCCEEEEEcCCCCcHHHHHHHHHHHHCC
Confidence 3455566666667777664 544444443322 223211 1222223322 23357888999999
Q ss_pred CceEEEcchHHHHHhhcCCEEEEc
Q 045642 251 LKAIVITDSAVFAMISRVNMVIVG 274 (406)
Q Consensus 251 I~vt~I~Dsav~~~m~~vd~VllG 274 (406)
+++..|++..-..+.+.+|.+|.-
T Consensus 107 ~~vi~IT~~~~s~l~~~ad~~l~~ 130 (186)
T 1m3s_A 107 GIVAALTINPESSIGKQADLIIRM 130 (186)
T ss_dssp CEEEEEESCTTSHHHHHCSEEEEC
T ss_pred CEEEEEECCCCCchHHhCCEEEEe
Confidence 999999998766777788988763
No 30
>2nvv_A Acetyl-COA hydrolase/transferase family protein; alpha beta protein, structural genomics, PSI-2, protein STRU initiative; 2.70A {Porphyromonas gingivalis}
Probab=82.87 E-value=17 Score=37.30 Aligned_cols=121 Identities=17% Similarity=0.237 Sum_probs=63.4
Q ss_pred HHHHHHhcccCcEEEeccCh------HHHHHHHHHHHH---cCC--ceEEEEe-cCCCC-----------------cchH
Q 045642 190 AEQAMELIHQNEVILTLGHS------KFVKEFLCAAKE---KKR--SFEVFIA-DGAPK-----------------FEGH 240 (406)
Q Consensus 190 ~~~a~~~I~~g~~ILT~g~S------~tV~~~L~~A~~---~~~--~f~ViV~-EsrP~-----------------~eG~ 240 (406)
++.|+++|++|++|...|+. ..+.++.+.+.+ +|. +++++.. -..|. +.|.
T Consensus 8 aeEAv~~IkdGdtV~~gGf~~~G~P~~Li~AL~~r~~~~~~~g~~~~Ltl~~~~s~g~~~~~~l~~~g~v~~~~~~~~~~ 87 (506)
T 2nvv_A 8 AEEAAEFVHHNDNVGFSGFTPAGNPKVVPAAIAKRAIAAHEKGNPFKIGMFTGASTGARLDGVLAQADAVKFRTPYQSNK 87 (506)
T ss_dssp HHHHHTTCCTTCEEEECCSSSTTCCCSHHHHHHHHHHHHHTTTCCCCEEEECSSCCCTTTHHHHHHTTCEEEEESCCCCH
T ss_pred HHHHHhhCCCCCEEEECCCCCCCCHHHHHHHHHHhHHhhccccCCceEEEEEecCCCcchhHHhccCCceEEEeeeCCCH
Confidence 34667889999999997653 234444444443 322 4544442 11222 2233
Q ss_pred HHHHHHHhCCCceEEEcchHHHHHhh-----cCCEEEEcceeEeeCCCccccc--c-hHHHHHHHhhCCCceEEecCCcc
Q 045642 241 ILAKELDKKGLKAIVITDSAVFAMIS-----RVNMVIVGVHAVMANGGVIAPA--G-LHVLALAAKKHDVPFVVVASTHE 312 (406)
Q Consensus 241 ~~a~~L~~~GI~vt~I~Dsav~~~m~-----~vd~VllGAdav~~nG~vvnk~--G-T~~lAl~Ak~~~vPv~V~aes~K 312 (406)
.+.+...+-.++.+-+.-+.+..++. ++|..++-|...-.+|.+.-.. | +..+|.+|+ .|+++.-+
T Consensus 88 ~~r~~i~~G~i~~~P~~ls~v~~~l~~~~l~~~DVAlI~as~aDe~Gnls~~~s~~~~~~~a~aA~------~VIveVn~ 161 (506)
T 2nvv_A 88 DLRNLINNGSTSYFDLHLSTLAQDLRYGFYGKVDVAIIEVADVTEDGKILPTTGVGILPTICRLAD------RIIVELND 161 (506)
T ss_dssp HHHHHHHTTSSEECCCCGGGHHHHHHTTSSCCCCEEEEEESEECTTSEEECCSBCBTHHHHHHHCS------EEEEEEET
T ss_pred HHHHHHHcCCCeEeCCCcccHHHHHHcCCcCCCCEEEEEecccCCCceEEEeCCcCcHHHHHHhCC------cEEEEECC
Confidence 33333332223333333344443432 5899999999999999876431 1 333333333 45555555
Q ss_pred cccc
Q 045642 313 LCSL 316 (406)
Q Consensus 313 ~~~~ 316 (406)
..|.
T Consensus 162 ~vP~ 165 (506)
T 2nvv_A 162 KHPK 165 (506)
T ss_dssp TSCG
T ss_pred CCCc
Confidence 5553
No 31
>2g39_A Acetyl-COA hydrolase; coenzyme A transferase, structural G PSI, protein structure initiative, midwest center for struc genomics, MCSG; 2.10A {Pseudomonas aeruginosa} SCOP: c.124.1.2 c.124.1.2
Probab=82.57 E-value=22 Score=36.40 Aligned_cols=118 Identities=17% Similarity=0.217 Sum_probs=62.1
Q ss_pred HHHHHhcccCcEEEeccCh-----HHHHHHHHHHHHcCCc--eEEEEe-cCCCC-----------------cchHHHHHH
Q 045642 191 EQAMELIHQNEVILTLGHS-----KFVKEFLCAAKEKKRS--FEVFIA-DGAPK-----------------FEGHILAKE 245 (406)
Q Consensus 191 ~~a~~~I~~g~~ILT~g~S-----~tV~~~L~~A~~~~~~--f~ViV~-EsrP~-----------------~eG~~~a~~ 245 (406)
+.|+++|++|++|...|+. ..+.+.|.+..++ +. ++++.. -..|. +.|..+.+.
T Consensus 19 eEAv~~IkdGdtV~~gGf~~~G~P~~Li~AL~~r~~~-~dl~Ltl~~~~~~g~~~~~~l~~~g~v~~~~~~~~~~~~r~~ 97 (497)
T 2g39_A 19 AEAADLIQDGMTVGMSGFTRAGEAKAVPQALAMRAKE-RPLRISLMTGASLGNDLDKQLTEAGVLARRMPFQVDSTLRKA 97 (497)
T ss_dssp HHHHTTCCTTCEEEECCBTTBSCCCHHHHHHHHHHHH-SCCCEEEECSSCCCTTHHHHHHHTTCEEEEESCCCCHHHHHH
T ss_pred HHHHhhCCCCCEEEECCCCCCCCHHHHHHHHHHhhhc-CCceEEEEecccccccchHHHhcCCceEEEEeeCCCHHHHHH
Confidence 4566789999999996543 2444444443332 45 444431 22232 222333333
Q ss_pred HHhCCCceEEEcc--hHHH-HHhh----cCCEEEEcceeEeeCCCcccccc---hHHHHHHHhhCCCceEEecCCccccc
Q 045642 246 LDKKGLKAIVITD--SAVF-AMIS----RVNMVIVGVHAVMANGGVIAPAG---LHVLALAAKKHDVPFVVVASTHELCS 315 (406)
Q Consensus 246 L~~~GI~vt~I~D--sav~-~~m~----~vd~VllGAdav~~nG~vvnk~G---T~~lAl~Ak~~~vPv~V~aes~K~~~ 315 (406)
.+.|- +.+++- +.+. ++.. ++|..|+-|...-.+|.+.-... +..+|.+|+ .|+++.-+..|
T Consensus 98 -i~~G~-v~fvP~~ls~~~~~l~~~~l~~~DVAlI~as~aDe~Gnls~~~s~~~~~~~a~aA~------~VIvEVn~~vP 169 (497)
T 2g39_A 98 -INAGE-VMFIDQHLSETVEQLRNHQLKLPDIAVIEAAAITEQGHIVPTTSVGNSASFAIFAK------QVIVEINLAHS 169 (497)
T ss_dssp -HHTTS-SEECCCCTTTHHHHHHTTSSCCCSEEEEEESEECTTSCEECCSBCBTHHHHHHHSS------EEEEEEETTSC
T ss_pred -HHcCC-CeEECCccccHHHHHHcCCcCCCCEEEEEecccCCCceEEEeCCcccHHHHHHhCC------eEEEEEcCCCC
Confidence 33442 333322 3333 3332 58999999999999998764321 233333343 45555555555
Q ss_pred cC
Q 045642 316 LY 317 (406)
Q Consensus 316 ~~ 317 (406)
..
T Consensus 170 ~~ 171 (497)
T 2g39_A 170 TN 171 (497)
T ss_dssp GG
T ss_pred cc
Confidence 43
No 32
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=82.41 E-value=15 Score=28.28 Aligned_cols=97 Identities=16% Similarity=0.160 Sum_probs=61.2
Q ss_pred CcEEEeccChHHHHHHHHHHHHcCCceEEEEecCCCCcchHHHHHHHHhCCCceEEE--cc-hHHHHHhhcCCEEEEcce
Q 045642 200 NEVILTLGHSKFVKEFLCAAKEKKRSFEVFIADGAPKFEGHILAKELDKKGLKAIVI--TD-SAVFAMISRVNMVIVGVH 276 (406)
Q Consensus 200 g~~ILT~g~S~tV~~~L~~A~~~~~~f~ViV~EsrP~~eG~~~a~~L~~~GI~vt~I--~D-sav~~~m~~vd~VllGAd 276 (406)
+..|+.+|....=..+...+.+.| .++|++++-.|. -++.+...|+..... .| ..+...+.++|.||..+
T Consensus 5 ~~~v~I~G~G~iG~~~~~~l~~~g-~~~v~~~~r~~~-----~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~~- 77 (118)
T 3ic5_A 5 RWNICVVGAGKIGQMIAALLKTSS-NYSVTVADHDLA-----ALAVLNRMGVATKQVDAKDEAGLAKALGGFDAVISAA- 77 (118)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHCS-SEEEEEEESCHH-----HHHHHHTTTCEEEECCTTCHHHHHHHTTTCSEEEECS-
T ss_pred cCeEEEECCCHHHHHHHHHHHhCC-CceEEEEeCCHH-----HHHHHHhCCCcEEEecCCCHHHHHHHHcCCCEEEECC-
Confidence 457888888444444555555444 377888876542 233444667665432 12 34556677888888765
Q ss_pred eEeeCCCcccccchHHHHHHHhhCCCceEEecCCcc
Q 045642 277 AVMANGGVIAPAGLHVLALAAKKHDVPFVVVASTHE 312 (406)
Q Consensus 277 av~~nG~vvnk~GT~~lAl~Ak~~~vPv~V~aes~K 312 (406)
| ...+..++..|...+++++.++....
T Consensus 78 -----~----~~~~~~~~~~~~~~g~~~~~~~~~~~ 104 (118)
T 3ic5_A 78 -----P----FFLTPIIAKAAKAAGAHYFDLTEDVA 104 (118)
T ss_dssp -----C----GGGHHHHHHHHHHTTCEEECCCSCHH
T ss_pred -----C----chhhHHHHHHHHHhCCCEEEecCcHH
Confidence 1 22467889999999999998775543
No 33
>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*
Probab=81.96 E-value=2.1 Score=44.23 Aligned_cols=106 Identities=21% Similarity=0.194 Sum_probs=49.5
Q ss_pred HHHHhcccCcEEEeccChHHHHHHHHHHHHcCCceEEEEecCCCCcchHHHHHHHHhCCCceEEEcchH-----------
Q 045642 192 QAMELIHQNEVILTLGHSKFVKEFLCAAKEKKRSFEVFIADGAPKFEGHILAKELDKKGLKAIVITDSA----------- 260 (406)
Q Consensus 192 ~a~~~I~~g~~ILT~g~S~tV~~~L~~A~~~~~~f~ViV~EsrP~~eG~~~a~~L~~~GI~vt~I~Dsa----------- 260 (406)
..-..|..||+++..|....+.++........+.-+|+|+-. +.-|+.+|+.|.+.|+++++|-...
T Consensus 315 ~~~~~l~~GD~L~v~g~~~~l~~~~~~~~~~~~~~~viIiG~--G~~G~~la~~L~~~g~~v~vid~d~~~~~~~~~~i~ 392 (565)
T 4gx0_A 315 QRETVLTEQSLLVLAGTKSQLAALEYLIGEAPEDELIFIIGH--GRIGCAAAAFLDRKPVPFILIDRQESPVCNDHVVVY 392 (565)
T ss_dssp --------------------------------CCCCEEEECC--SHHHHHHHHHHHHTTCCEEEEESSCCSSCCSSCEEE
T ss_pred CCCcEeCCCCEEEEEeCHHHHHHHHHHhcCCCCCCCEEEECC--CHHHHHHHHHHHHCCCCEEEEECChHHHhhcCCEEE
Confidence 344567889999999988887776655443222256677744 4567899999999999999985221
Q ss_pred ---------HHHHhhcCCEEEEcceeEeeCCCcccccchHHHHHHHhhCCCceEEec
Q 045642 261 ---------VFAMISRVNMVIVGVHAVMANGGVIAPAGLHVLALAAKKHDVPFVVVA 308 (406)
Q Consensus 261 ---------v~~~m~~vd~VllGAdav~~nG~vvnk~GT~~lAl~Ak~~~vPv~V~a 308 (406)
-..=+.++|.|++..+. ..=+..+++.||..+.+..+++
T Consensus 393 gD~t~~~~L~~agi~~ad~vi~~~~~---------d~~ni~~~~~ak~l~~~~~iia 440 (565)
T 4gx0_A 393 GDATVGQTLRQAGIDRASGIIVTTND---------DSTNIFLTLACRHLHSHIRIVA 440 (565)
T ss_dssp SCSSSSTHHHHHTTTSCSEEEECCSC---------HHHHHHHHHHHHHHCSSSEEEE
T ss_pred eCCCCHHHHHhcCccccCEEEEECCC---------chHHHHHHHHHHHHCCCCEEEE
Confidence 12224466766665542 2345778899999998755554
No 34
>3s3t_A Nucleotide-binding protein, universal stress PROT family; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: ATP; 1.90A {Lactobacillus plantarum} SCOP: c.26.2.0
Probab=81.80 E-value=19 Score=28.97 Aligned_cols=60 Identities=5% Similarity=0.098 Sum_probs=35.6
Q ss_pred HHHHhCCC-ceEEE--cchH---HHH-Hh--hcCCEEEEcceeEeeCCCccc-ccchHHHHHHHhhCCCceEEe
Q 045642 244 KELDKKGL-KAIVI--TDSA---VFA-MI--SRVNMVIVGVHAVMANGGVIA-PAGLHVLALAAKKHDVPFVVV 307 (406)
Q Consensus 244 ~~L~~~GI-~vt~I--~Dsa---v~~-~m--~~vd~VllGAdav~~nG~vvn-k~GT~~lAl~Ak~~~vPv~V~ 307 (406)
+.+.+.|+ ++... .... +.. +. .++|.+++|++. .|++-. -.|+..-.+ .++..+||+|+
T Consensus 76 ~~~~~~g~~~~~~~~~~g~~~~~I~~~~a~~~~~dliV~G~~~---~~~~~~~~~Gs~~~~v-l~~~~~pVlvV 145 (146)
T 3s3t_A 76 QFVATTSAPNLKTEISYGIPKHTIEDYAKQHPEIDLIVLGATG---TNSPHRVAVGSTTSYV-VDHAPCNVIVI 145 (146)
T ss_dssp HHHTTSSCCCCEEEEEEECHHHHHHHHHHHSTTCCEEEEESCC---SSCTTTCSSCHHHHHH-HHHCSSEEEEE
T ss_pred HHHHhcCCcceEEEEecCChHHHHHHHHHhhcCCCEEEECCCC---CCCcceEEEcchHHHH-hccCCCCEEEe
Confidence 34445788 65533 2222 222 33 369999999985 333333 367655444 55667999986
No 35
>3sho_A Transcriptional regulator, RPIR family; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.80A {Sphaerobacter thermophilus}
Probab=80.97 E-value=13 Score=31.92 Aligned_cols=86 Identities=20% Similarity=0.262 Sum_probs=52.3
Q ss_pred HHHHHHhcccCcEEEecc--ChHHHHHHHHHHHH-cCCce--------------------EEEEecCCCCc--chHHHHH
Q 045642 190 AEQAMELIHQNEVILTLG--HSKFVKEFLCAAKE-KKRSF--------------------EVFIADGAPKF--EGHILAK 244 (406)
Q Consensus 190 ~~~a~~~I~~g~~ILT~g--~S~tV~~~L~~A~~-~~~~f--------------------~ViV~EsrP~~--eG~~~a~ 244 (406)
.+.+++.|.+...|..+| .|..+...+..... -|+.. .|+++=|..+. +-...++
T Consensus 29 l~~~~~~i~~a~~I~i~G~G~S~~~a~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~d~~i~iS~sG~t~~~~~~~~ 108 (187)
T 3sho_A 29 IEAAVEAICRADHVIVVGMGFSAAVAVFLGHGLNSLGIRTTVLTEGGSTLTITLANLRPTDLMIGVSVWRYLRDTVAALA 108 (187)
T ss_dssp HHHHHHHHHHCSEEEEECCGGGHHHHHHHHHHHHHTTCCEEEECCCTHHHHHHHHTCCTTEEEEEECCSSCCHHHHHHHH
T ss_pred HHHHHHHHHhCCEEEEEecCchHHHHHHHHHHHHhcCCCEEEecCCchhHHHHHhcCCCCCEEEEEeCCCCCHHHHHHHH
Confidence 345556666666777754 46655555544332 12211 12222222222 2357788
Q ss_pred HHHhCCCceEEEcchHHHHHhhcCCEEEEcc
Q 045642 245 ELDKKGLKAIVITDSAVFAMISRVNMVIVGV 275 (406)
Q Consensus 245 ~L~~~GI~vt~I~Dsav~~~m~~vd~VllGA 275 (406)
.+++.|+++..|++..-..+-+.+|.+|.-.
T Consensus 109 ~ak~~g~~vi~IT~~~~s~l~~~ad~~l~~~ 139 (187)
T 3sho_A 109 GAAERGVPTMALTDSSVSPPARIADHVLVAA 139 (187)
T ss_dssp HHHHTTCCEEEEESCTTSHHHHHCSEEEECC
T ss_pred HHHHCCCCEEEEeCCCCCcchhhCcEEEEec
Confidence 8889999999999987777777899888743
No 36
>1jeo_A MJ1247, hypothetical protein MJ1247; RUMP pathway, phosphosugar, 3-hexulose-6-phosphate isomerase structural genomics; HET: CME CIT; 2.00A {Methanocaldococcus jannaschii} SCOP: c.80.1.3
Probab=80.29 E-value=12 Score=31.88 Aligned_cols=104 Identities=11% Similarity=0.053 Sum_probs=57.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcEEEeccC--hHHHHHHHHHHH-HcCCce--------------EEEE
Q 045642 168 KSELIKAVNELIEDINTCREGIAEQAMELIHQNEVILTLGH--SKFVKEFLCAAK-EKKRSF--------------EVFI 230 (406)
Q Consensus 168 k~~l~~~i~~~~~e~~~~~~~I~~~a~~~I~~g~~ILT~g~--S~tV~~~L~~A~-~~~~~f--------------~ViV 230 (406)
.+..++.+++..+.++ ..-.+.+++.|.+...|..+|. |..+...+.... +-|++. .|++
T Consensus 11 ~~~~~~~i~~t~~~l~---~~~i~~~~~~i~~a~~I~i~G~G~S~~~A~~~~~~l~~~g~~~~~~~~~~~~~~~~~d~vi 87 (180)
T 1jeo_A 11 SNNILILKKFYTNDEW---KNKLDSLIDRIIKAKKIFIFGVGRSGYIGRCFAMRLMHLGFKSYFVGETTTPSYEKDDLLI 87 (180)
T ss_dssp HHHHHGGGHHHHCHHH---HHHHHHHHHHHHHCSSEEEECCHHHHHHHHHHHHHHHHTTCCEEETTSTTCCCCCTTCEEE
T ss_pred HHHHHHHHHHHHHhCC---HHHHHHHHHHHHhCCEEEEEeecHHHHHHHHHHHHHHHcCCeEEEeCCCccccCCCCCEEE
Confidence 3344444444443332 2333455566766677777664 555554443332 223211 1122
Q ss_pred ecCCCC--cchHHHHHHHHhCCCceEEEcchHHHHHhhcCCEEEEcc
Q 045642 231 ADGAPK--FEGHILAKELDKKGLKAIVITDSAVFAMISRVNMVIVGV 275 (406)
Q Consensus 231 ~EsrP~--~eG~~~a~~L~~~GI~vt~I~Dsav~~~m~~vd~VllGA 275 (406)
+=|..+ .+-...++.+.+.|+++..|++..-. +.+.+|.++.-.
T Consensus 88 ~iS~sG~t~~~~~~~~~ak~~g~~vi~IT~~~~s-l~~~ad~~l~~~ 133 (180)
T 1jeo_A 88 LISGSGRTESVLTVAKKAKNINNNIIAIVCECGN-VVEFADLTIPLE 133 (180)
T ss_dssp EEESSSCCHHHHHHHHHHHTTCSCEEEEESSCCG-GGGGCSEEEECC
T ss_pred EEeCCCCcHHHHHHHHHHHHCCCcEEEEeCCCCh-HHHhCCEEEEeC
Confidence 222222 23357788889999999999997666 677789887644
No 37
>3rrl_A Succinyl-COA:3-ketoacid-coenzyme A transferase SU; MCSG,PSI-biology, structural genomics, midwest center for ST genomics; 2.29A {Helicobacter pylori}
Probab=80.13 E-value=5.7 Score=36.66 Aligned_cols=120 Identities=13% Similarity=0.158 Sum_probs=67.4
Q ss_pred HHHHHhcccCcEEEeccC--hHHHHHHHHHHHHc-CCceEEEEecCCC---------------------CcchHHHHHHH
Q 045642 191 EQAMELIHQNEVILTLGH--SKFVKEFLCAAKEK-KRSFEVFIADGAP---------------------KFEGHILAKEL 246 (406)
Q Consensus 191 ~~a~~~I~~g~~ILT~g~--S~tV~~~L~~A~~~-~~~f~ViV~EsrP---------------------~~eG~~~a~~L 246 (406)
+.|.++|++|++|++.|+ ...-..++....++ -++++++-....+ ......+.+..
T Consensus 12 ~eAv~~IkdG~tV~~gGf~~~g~P~~li~aL~~~~~kdLtli~~~~g~~~~g~~~L~~~G~v~r~i~s~~g~~~~~~~~~ 91 (235)
T 3rrl_A 12 DKALSALKDGDTILVGGFGLCGIPEYAIDYIYKKGIKDLIVVSNNCGVDDFGLGILLEKKQIKKIIASYVGENKIFESQM 91 (235)
T ss_dssp HHHHTTCCTTCEEEECCBTTBTCCHHHHHHHHHHTCCSEEEECSCCCCSSSGGGGGGTTTCEEEEEESCCCSCHHHHHHH
T ss_pred HHHHhhCCCCCEEEECCcCccCCHHHHHHHHHhcCCCcEEEEEcCCCCCCcCHHHHHhCCCeeEEEeccccCCHHHHHHH
Confidence 456778999999998663 33334444443333 3567776542211 11123344444
Q ss_pred HhCCCceEEEcchHHHHHhh---------------------------------------cCCEEEEcceeEeeCCCcccc
Q 045642 247 DKKGLKAIVITDSAVFAMIS---------------------------------------RVNMVIVGVHAVMANGGVIAP 287 (406)
Q Consensus 247 ~~~GI~vt~I~Dsav~~~m~---------------------------------------~vd~VllGAdav~~nG~vvnk 287 (406)
.+-.|.+..++-+.++..++ ++|..|+.|...-.+|.+.-.
T Consensus 92 ~~G~ie~~~~pqg~la~~~rag~~G~P~~~t~~glgT~v~~gk~~~~~~G~~~l~~~a~~~DvAli~a~~aD~~GN~~~~ 171 (235)
T 3rrl_A 92 LNGEIEVVLTPQGTLAENLHAGGAGIPAYYTPTGVGTLIAQGKESREFNGKEYILERAITGDYGLIKAYKSDTLGNLVFR 171 (235)
T ss_dssp HHTSSEEEECCHHHHHHHHHHHHHTCCEEEESTTTTSGGGTTCCEEEETTEEEEEEECCCEEEEEEECSEEETTCCEECC
T ss_pred HcCCeEEEECCHHHHHHHHHHHhCCCCEEEeccccCcccccCceEEeeCCEEEEEEcCCCCeEEEEEeeecCCCceEEEe
Confidence 44445555555443332221 679999999999999998853
Q ss_pred cc----hHHHHHHHhhCCCceEEecCCcccccc
Q 045642 288 AG----LHVLALAAKKHDVPFVVVASTHELCSL 316 (406)
Q Consensus 288 ~G----T~~lAl~Ak~~~vPv~V~aes~K~~~~ 316 (406)
.. ...+|.+|+ .|+++.-++.|.
T Consensus 172 ~~~~~~~~~~a~aA~------~vIveve~iv~~ 198 (235)
T 3rrl_A 172 KTARNFNPLCAMAAK------ICVAEVEEIVPA 198 (235)
T ss_dssp GGGCTTHHHHHHTEE------EEEEEESEEECT
T ss_pred cCcccccHHHHHhcC------EEEEEEeecccc
Confidence 22 234555554 455555555553
No 38
>1kmj_A Selenocysteine lyase; persulfide perselenide NIFS pyridoxal phosphate, structural PSI, protein structure initiative; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.3 PDB: 1i29_A* 1jf9_A* 1kmk_A* 1c0n_A*
Probab=79.65 E-value=41 Score=31.62 Aligned_cols=110 Identities=13% Similarity=0.122 Sum_probs=58.0
Q ss_pred HHHHhccc---CcEEEeccChHHHHHHHHHHHH--cCCceEEEEecCCCCcchH-HHH-HHHHhCCCceEEEcc------
Q 045642 192 QAMELIHQ---NEVILTLGHSKFVKEFLCAAKE--KKRSFEVFIADGAPKFEGH-ILA-KELDKKGLKAIVITD------ 258 (406)
Q Consensus 192 ~a~~~I~~---g~~ILT~g~S~tV~~~L~~A~~--~~~~f~ViV~EsrP~~eG~-~~a-~~L~~~GI~vt~I~D------ 258 (406)
..++++.. ..+++|.|.+..+..++..+.+ .+..-+|++. .|.+.|. ... ......|.++..++-
T Consensus 75 ~la~~~~~~~~~~v~~~~g~t~a~~~~~~~~~~~~~~~gd~vl~~--~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 152 (406)
T 1kmj_A 75 RASLFINARSAEELVFVRGTTEGINLVANSWGNSNVRAGDNIIIS--QMEHHANIVPWQMLCARVGAELRVIPLNPDGTL 152 (406)
T ss_dssp HHHHHTTCSCGGGEEEESSHHHHHHHHHHHTHHHHCCTTCEEEEE--TTCCGGGTHHHHHHHHHHTCEEEEECBCTTSCB
T ss_pred HHHHHcCCCCCCeEEEeCChhHHHHHHHHHhhhhcCCCCCEEEEe--cccchHHHHHHHHHHHhCCCEEEEEecCCCCCc
Confidence 33345543 4578887777777777776621 1233456665 4555553 222 223346888877752
Q ss_pred --hHHHHHhhcCCEEEEcceeEeeCCCcccccchHHHHHHHhhCCCceEE
Q 045642 259 --SAVFAMISRVNMVIVGVHAVMANGGVIAPAGLHVLALAAKKHDVPFVV 306 (406)
Q Consensus 259 --sav~~~m~~vd~VllGAdav~~nG~vvnk~GT~~lAl~Ak~~~vPv~V 306 (406)
..+-..+..-.++|+-...--..|.+.. -..++-+|+++++++++
T Consensus 153 d~~~l~~~l~~~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~ 199 (406)
T 1kmj_A 153 QLETLPTLFDEKTRLLAITHVSNVLGTENP---LAEMITLAHQHGAKVLV 199 (406)
T ss_dssp CGGGHHHHCCTTEEEEEEESBCTTTCCBCC---HHHHHHHHHHTTCEEEE
T ss_pred CHHHHHHHhccCCeEEEEeCCCccccCcCC---HHHHHHHHHHcCCEEEE
Confidence 2333333322233332221122244443 35677789999988776
No 39
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=78.78 E-value=9.8 Score=35.83 Aligned_cols=110 Identities=16% Similarity=0.055 Sum_probs=64.8
Q ss_pred cCcEEEeccChHHHHHHHHHHHHcCCceEEEEecCCCCcchHHHHHHHHh-------CCCceEEE--cc-hHHHHHhhcC
Q 045642 199 QNEVILTLGHSKFVKEFLCAAKEKKRSFEVFIADGAPKFEGHILAKELDK-------KGLKAIVI--TD-SAVFAMISRV 268 (406)
Q Consensus 199 ~g~~ILT~g~S~tV~~~L~~A~~~~~~f~ViV~EsrP~~eG~~~a~~L~~-------~GI~vt~I--~D-sav~~~m~~v 268 (406)
.+.+||+.|.++.+=..|.....+ +..+|+++.-++.... .....+.. .++.+... .| .++..++.++
T Consensus 24 ~~~~vlVtGatG~iG~~l~~~L~~-~g~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~ 101 (351)
T 3ruf_A 24 SPKTWLITGVAGFIGSNLLEKLLK-LNQVVIGLDNFSTGHQ-YNLDEVKTLVSTEQWSRFCFIEGDIRDLTTCEQVMKGV 101 (351)
T ss_dssp SCCEEEEETTTSHHHHHHHHHHHH-TTCEEEEEECCSSCCH-HHHHHHHHTSCHHHHTTEEEEECCTTCHHHHHHHTTTC
T ss_pred CCCeEEEECCCcHHHHHHHHHHHH-CCCEEEEEeCCCCCch-hhhhhhhhccccccCCceEEEEccCCCHHHHHHHhcCC
Confidence 467899999888777766554422 3478888876554322 22333433 34443322 12 3456667777
Q ss_pred CEEEEcceeEeeCC--------CcccccchHHHHHHHhhCCCceEEecCC
Q 045642 269 NMVIVGVHAVMANG--------GVIAPAGLHVLALAAKKHDVPFVVVAST 310 (406)
Q Consensus 269 d~VllGAdav~~nG--------~vvnk~GT~~lAl~Ak~~~vPv~V~aes 310 (406)
|.||--|-....+. --+|-.||..++-+|+..+++-+|.+.+
T Consensus 102 d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~v~~SS 151 (351)
T 3ruf_A 102 DHVLHQAALGSVPRSIVDPITTNATNITGFLNILHAAKNAQVQSFTYAAS 151 (351)
T ss_dssp SEEEECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEE
T ss_pred CEEEECCccCCcchhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEec
Confidence 77776553211000 1346789999999999999866665544
No 40
>3g0t_A Putative aminotransferase; NP_905498.1, putative aspartate aminotransferase, structural genomics, joint center for structural genomics; HET: MSE LLP PE4; 1.75A {Porphyromonas gingivalis}
Probab=78.04 E-value=11 Score=36.54 Aligned_cols=118 Identities=16% Similarity=0.147 Sum_probs=63.6
Q ss_pred HHHHHHHHHHHHh----cccCcEEEeccChHHHHHHHHHHH--HcCCceEEEEecCCCCcchHHHHHHHHhCCCceEEEc
Q 045642 184 TCREGIAEQAMEL----IHQNEVILTLGHSKFVKEFLCAAK--EKKRSFEVFIADGAPKFEGHILAKELDKKGLKAIVIT 257 (406)
Q Consensus 184 ~~~~~I~~~a~~~----I~~g~~ILT~g~S~tV~~~L~~A~--~~~~~f~ViV~EsrP~~eG~~~a~~L~~~GI~vt~I~ 257 (406)
..++.+++..... +....+++|-|.+..+..++..+. +.|...+|++. .|.+.+... .+...|.++..++
T Consensus 86 ~lr~~la~~~~~~~g~~~~~~~i~~t~g~t~al~~~~~~l~~~~~gd~~~Vl~~--~p~~~~~~~--~~~~~g~~~~~v~ 161 (437)
T 3g0t_A 86 ELKQEASRFAKLFVNIDIPARACVPTVGSMQGCFVSFLVANRTHKNREYGTLFI--DPGFNLNKL--QCRILGQKFESFD 161 (437)
T ss_dssp HHHHHHHHHHHHHHCCCCCGGGEEEESHHHHHHHHHHHHHTTSCTTCSCCEEEE--ESCCHHHHH--HHHHHTCCCEEEE
T ss_pred HHHHHHHHHHHHhhCCCCCcccEEEeCCHHHHHHHHHHHHhcCCCCCccEEEEe--CCCcHhHHH--HHHHcCCEEEEEe
Confidence 3444555443322 345578888887777777766664 44442256665 577766432 3345688877775
Q ss_pred ch---------HHHHHh--hcCCEEEEcceeEeeCCCcccccchHHHHHHHhhCCCceEE
Q 045642 258 DS---------AVFAMI--SRVNMVIVGVHAVMANGGVIAPAGLHVLALAAKKHDVPFVV 306 (406)
Q Consensus 258 Ds---------av~~~m--~~vd~VllGAdav~~nG~vvnk~GT~~lAl~Ak~~~vPv~V 306 (406)
-. ++-..+ ++...|++ +.---+.|.+...---..++-+|+++++.+++
T Consensus 162 ~~~~~~~~d~~~l~~~l~~~~~~~v~l-~~p~nptG~~~~~~~l~~i~~~a~~~~~~li~ 220 (437)
T 3g0t_A 162 LFEYRGEKLREKLESYLQTGQFCSIIY-SNPNNPTWQCMTDEELRIIGELATKHDVIVIE 220 (437)
T ss_dssp GGGGCTTHHHHHHHHHHTTTCCCEEEE-ESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEE
T ss_pred ecCCCCccCHHHHHHHHhcCCceEEEE-eCCCCCCCCcCCHHHHHHHHHHHHHCCcEEEE
Confidence 21 233333 34555554 21112223333222233467789999998887
No 41
>3hgm_A Universal stress protein TEAD; rossman fold, signaling protein; HET: ATP; 1.90A {Halomonas elongata} SCOP: c.26.2.0
Probab=77.36 E-value=20 Score=28.71 Aligned_cols=61 Identities=16% Similarity=0.306 Sum_probs=36.8
Q ss_pred HHHHHhCCCce---EE-Ec-ch---HHHHHhh--cCCEEEEcceeEeeCCCccc-ccchHHHHHHHhhCCCceEEe
Q 045642 243 AKELDKKGLKA---IV-IT-DS---AVFAMIS--RVNMVIVGVHAVMANGGVIA-PAGLHVLALAAKKHDVPFVVV 307 (406)
Q Consensus 243 a~~L~~~GI~v---t~-I~-Ds---av~~~m~--~vd~VllGAdav~~nG~vvn-k~GT~~lAl~Ak~~~vPv~V~ 307 (406)
.+.+.+.|+++ +. +. .. .+..+.+ ++|.+++|++. .|++-. -.|+..-.+ .++.++||+|+
T Consensus 76 ~~~~~~~g~~~~~~~~~~~~g~~~~~I~~~a~~~~~dliV~G~~~---~~~~~~~~~Gs~~~~v-l~~~~~pVlvV 147 (147)
T 3hgm_A 76 KTRATELGVPADKVRAFVKGGRPSRTIVRFARKRECDLVVIGAQG---TNGDKSLLLGSVAQRV-AGSAHCPVLVV 147 (147)
T ss_dssp HHHHHHTTCCGGGEEEEEEESCHHHHHHHHHHHTTCSEEEECSSC---TTCCSCCCCCHHHHHH-HHHCSSCEEEC
T ss_pred HHHHHhcCCCccceEEEEecCCHHHHHHHHHHHhCCCEEEEeCCC---CccccceeeccHHHHH-HhhCCCCEEEC
Confidence 44556689877 32 22 22 2333334 69999999975 344443 357655444 55667999985
No 42
>1t3i_A Probable cysteine desulfurase; PLP-binding enzyme, transferase; HET: 2OS PLP; 1.80A {Synechocystis SP} SCOP: c.67.1.3
Probab=76.27 E-value=53 Score=31.06 Aligned_cols=110 Identities=14% Similarity=0.121 Sum_probs=58.0
Q ss_pred HHHHhccc---CcEEEeccChHHHHHHHHHHHH--cCCceEEEEecCCCCcchHH--HHHHHHhCCCceEEEcc------
Q 045642 192 QAMELIHQ---NEVILTLGHSKFVKEFLCAAKE--KKRSFEVFIADGAPKFEGHI--LAKELDKKGLKAIVITD------ 258 (406)
Q Consensus 192 ~a~~~I~~---g~~ILT~g~S~tV~~~L~~A~~--~~~~f~ViV~EsrP~~eG~~--~a~~L~~~GI~vt~I~D------ 258 (406)
..++++.. ..+++|.|.+..+..++..+.+ .++.-+|++. .|.+.|.. +.......|+.+..++-
T Consensus 80 ~la~~~~~~~~~~v~~~~g~t~a~~~~~~~~~~~~~~~gd~Vl~~--~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~ 157 (420)
T 1t3i_A 80 KVAKFINARSPREIVYTRNATEAINLVAYSWGMNNLKAGDEIITT--VMEHHSNLVPWQMVAAKTGAVLKFVQLDEQESF 157 (420)
T ss_dssp HHHHHTTCSCGGGEEEESSHHHHHHHHHHHTHHHHCCTTCEEEEE--TTCCGGGTHHHHHHHHHHCCEEEEECBCTTSSB
T ss_pred HHHHHcCCCCCCeEEEcCChHHHHHHHHHHhhhcccCCCCEEEEC--cchhHHHHHHHHHHHHhcCcEEEEeccCCCCCc
Confidence 33445543 4678887777777777776621 1223356654 46666632 22333456888877753
Q ss_pred --hHHHHHhhcCCEEEEcceeEeeCCCcccccchHHHHHHHhhCCCceEE
Q 045642 259 --SAVFAMISRVNMVIVGVHAVMANGGVIAPAGLHVLALAAKKHDVPFVV 306 (406)
Q Consensus 259 --sav~~~m~~vd~VllGAdav~~nG~vvnk~GT~~lAl~Ak~~~vPv~V 306 (406)
..+-..+..-.++|+-...--..|.+.. -..++-+|+++++++++
T Consensus 158 d~~~l~~~l~~~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~ 204 (420)
T 1t3i_A 158 DLEHFKTLLSEKTKLVTVVHISNTLGCVNP---AEEIAQLAHQAGAKVLV 204 (420)
T ss_dssp CHHHHHHHCCTTEEEEEEESBCTTTCBBCC---HHHHHHHHHHTTCEEEE
T ss_pred CHHHHHHhhCCCceEEEEeCCcccccCcCC---HHHHHHHHHHcCCEEEE
Confidence 1222333221233332222122343333 35677889999988876
No 43
>3h14_A Aminotransferase, classes I and II; YP_167802.1, SPO258 structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.90A {Silicibacter pomeroyi dss-3}
Probab=76.22 E-value=22 Score=33.83 Aligned_cols=117 Identities=20% Similarity=0.197 Sum_probs=63.2
Q ss_pred HHHHHHHHHHHHHh----cccCcEEEeccChHHHHHHHHHHHHcCCceEEEEecCCCCcchHHHHHHHHhCCCceEEEcc
Q 045642 183 NTCREGIAEQAMEL----IHQNEVILTLGHSKFVKEFLCAAKEKKRSFEVFIADGAPKFEGHILAKELDKKGLKAIVITD 258 (406)
Q Consensus 183 ~~~~~~I~~~a~~~----I~~g~~ILT~g~S~tV~~~L~~A~~~~~~f~ViV~EsrP~~eG~~~a~~L~~~GI~vt~I~D 258 (406)
...++.|++...+. +....+++|-|.+..+..++....+.| -+|++. .|.+.+.. ..+...|.++..++-
T Consensus 71 ~~lr~~ia~~~~~~~g~~~~~~~v~~t~g~~~al~~~~~~l~~~g--d~vl~~--~p~~~~~~--~~~~~~g~~~~~v~~ 144 (391)
T 3h14_A 71 PALRQRIARLYGEWYGVDLDPGRVVITPGSSGGFLLAFTALFDSG--DRVGIG--APGYPSYR--QILRALGLVPVDLPT 144 (391)
T ss_dssp HHHHHHHHHHHHHHHCCCCCGGGEEEESSHHHHHHHHHHHHCCTT--CEEEEE--ESCCHHHH--HHHHHTTCEEEEEEC
T ss_pred HHHHHHHHHHHHHHhCCCCCHHHEEEecChHHHHHHHHHHhcCCC--CEEEEc--CCCCccHH--HHHHHcCCEEEEeec
Confidence 44556666554432 345567888787777766666664333 355554 36666643 344567888877752
Q ss_pred h-------HHHHHhh-cCCEEEEcceeEeeCCCcccccchHHHHHHHhhCCCceEE
Q 045642 259 S-------AVFAMIS-RVNMVIVGVHAVMANGGVIAPAGLHVLALAAKKHDVPFVV 306 (406)
Q Consensus 259 s-------av~~~m~-~vd~VllGAdav~~nG~vvnk~GT~~lAl~Ak~~~vPv~V 306 (406)
. -...+-+ +...|++. ..--+.|.+...---..++-.|+++++++++
T Consensus 145 ~~~~~~~~d~~~l~~~~~~~v~i~-~p~nptG~~~~~~~l~~l~~~~~~~~~~li~ 199 (391)
T 3h14_A 145 APENRLQPVPADFAGLDLAGLMVA-SPANPTGTMLDHAAMGALIEAAQAQGASFIS 199 (391)
T ss_dssp CGGGTTSCCHHHHTTSCCSEEEEE-SSCTTTCCCCCHHHHHHHHHHHHHTTCEEEE
T ss_pred CcccCCCCCHHHHHhcCCeEEEEC-CCCCCCCccCCHHHHHHHHHHHHHcCCEEEE
Confidence 2 1222222 34444432 1111223333322234567788999998886
No 44
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=76.13 E-value=5.2 Score=35.17 Aligned_cols=101 Identities=15% Similarity=0.106 Sum_probs=59.7
Q ss_pred EEEeccChHHHHHHHHHHHHcCCceEEEEecCCCCcchHHHHHHHHhCCCceEEE--cc--hHHHHHhhcCCEEEEccee
Q 045642 202 VILTLGHSKFVKEFLCAAKEKKRSFEVFIADGAPKFEGHILAKELDKKGLKAIVI--TD--SAVFAMISRVNMVIVGVHA 277 (406)
Q Consensus 202 ~ILT~g~S~tV~~~L~~A~~~~~~f~ViV~EsrP~~eG~~~a~~L~~~GI~vt~I--~D--sav~~~m~~vd~VllGAda 277 (406)
+||..|.++.+=..|.... ..+..+|+++.-.|...-. + .++.+... .| ..+..++.++|.||--|-.
T Consensus 2 ~ilItGatG~iG~~l~~~L-~~~g~~V~~~~R~~~~~~~-----~--~~~~~~~~D~~d~~~~~~~~~~~~d~vi~~ag~ 73 (219)
T 3dqp_A 2 KIFIVGSTGRVGKSLLKSL-STTDYQIYAGARKVEQVPQ-----Y--NNVKAVHFDVDWTPEEMAKQLHGMDAIINVSGS 73 (219)
T ss_dssp EEEEESTTSHHHHHHHHHH-TTSSCEEEEEESSGGGSCC-----C--TTEEEEECCTTSCHHHHHTTTTTCSEEEECCCC
T ss_pred eEEEECCCCHHHHHHHHHH-HHCCCEEEEEECCccchhh-----c--CCceEEEecccCCHHHHHHHHcCCCEEEECCcC
Confidence 5777888777777666555 2334788877655432110 0 23332221 22 3455566777777765543
Q ss_pred EeeCCCcccccchHHHHHHHhhCCCceEEecCC
Q 045642 278 VMANGGVIAPAGLHVLALAAKKHDVPFVVVAST 310 (406)
Q Consensus 278 v~~nG~vvnk~GT~~lAl~Ak~~~vPv~V~aes 310 (406)
...+---+|-.|+..++-+|+..+++-+|...+
T Consensus 74 ~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS 106 (219)
T 3dqp_A 74 GGKSLLKVDLYGAVKLMQAAEKAEVKRFILLST 106 (219)
T ss_dssp TTSSCCCCCCHHHHHHHHHHHHTTCCEEEEECC
T ss_pred CCCCcEeEeHHHHHHHHHHHHHhCCCEEEEECc
Confidence 322223357889999999999999876665444
No 45
>2ord_A Acoat, acetylornithine aminotransferase; TM1785, acetylornithine aminotransferase (EC 2.6.1.11) (ACOA structural genomics; HET: MSE PLP; 1.40A {Thermotoga maritima MSB8} PDB: 2e54_A*
Probab=75.78 E-value=20 Score=34.14 Aligned_cols=131 Identities=16% Similarity=0.181 Sum_probs=64.4
Q ss_pred HHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHhcccCcEEEeccChHHHHHHHHHHHH------cCCceEEEEecCC
Q 045642 165 KKLKSELIKAVNELIE----DINTCREGIAEQAMELIHQNEVILTLGHSKFVKEFLCAAKE------KKRSFEVFIADGA 234 (406)
Q Consensus 165 ~~~k~~l~~~i~~~~~----e~~~~~~~I~~~a~~~I~~g~~ILT~g~S~tV~~~L~~A~~------~~~~f~ViV~Esr 234 (406)
+++++.+.+.++.+.. -.....+.+.+..++++....+++|.|.+..+..+++.+.. .++ -+|++.+
T Consensus 59 ~~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~v~~~~gg~~a~~~al~~~~~~~~~~~~~~-~~vi~~~-- 135 (397)
T 2ord_A 59 PRLVEAIKDQAEKLIHCSNLFWNRPQMELAELLSKNTFGGKVFFANTGTEANEAAIKIARKYGKKKSEKK-YRILSAH-- 135 (397)
T ss_dssp HHHHHHHHHHHHHCSCCCTTSEEHHHHHHHHHHHHTTTSCEEEEESSHHHHHHHHHHHHHHHHHHHCTTC-CEEEEEB--
T ss_pred HHHHHHHHHHHHhcccCccccCCHHHHHHHHHHHHhcCCCeEEEeCCHHHHHHHHHHHHHHHhhcCCCCC-ceEEEEc--
Confidence 4566666666554210 00112233444444555555678888888877777776643 233 3566664
Q ss_pred CCcchHHHHHHHHhCCCc------------eEEEc--c-hHHHHHhhcCCEEEEcceeEeeCCCcccccch--------H
Q 045642 235 PKFEGHILAKELDKKGLK------------AIVIT--D-SAVFAMISRVNMVIVGVHAVMANGGVIAPAGL--------H 291 (406)
Q Consensus 235 P~~eG~~~a~~L~~~GI~------------vt~I~--D-sav~~~m~~vd~VllGAdav~~nG~vvnk~GT--------~ 291 (406)
|.+.|... ..+...|.+ +..++ | ..+-..+..-.+ +|+-+. .-|..|. .
T Consensus 136 ~~yh~~~~-~~~~~~g~~~~~~~~~p~~~~~~~~~~~d~~~l~~~l~~~~~------~v~~~~-~~nptG~~~~~~~~l~ 207 (397)
T 2ord_A 136 NSFHGRTL-GSLTATGQPKYQKPFEPLVPGFEYFEFNNVEDLRRKMSEDVC------AVFLEP-IQGESGIVPATKEFLE 207 (397)
T ss_dssp TCCCCSSH-HHHHHSBCHHHHGGGCSCCTTEEEECTTCHHHHHHHCCTTEE------EEEECS-EECTTTCEECCHHHHH
T ss_pred CCcCCCch-hhhhccCChhhccccCCCCCCeeEecCCCHHHHHHHhhcCeE------EEEEec-ccCCCCcccCCHHHHH
Confidence 34434211 011223332 55553 2 223333322112 222221 4444554 4
Q ss_pred HHHHHHhhCCCceEE
Q 045642 292 VLALAAKKHDVPFVV 306 (406)
Q Consensus 292 ~lAl~Ak~~~vPv~V 306 (406)
.++-+|+++++++++
T Consensus 208 ~l~~l~~~~~~~li~ 222 (397)
T 2ord_A 208 EARKLCDEYDALLVF 222 (397)
T ss_dssp HHHHHHHHHTCEEEE
T ss_pred HHHHHHHHcCCEEEE
Confidence 566788999998876
No 46
>3kax_A Aminotransferase, classes I and II; PLP, C-S lyase, transf structural genomics, center for structural genomics of INFE diseases, csgid; HET: LLP MSE PLP; 1.70A {Bacillus anthracis str} PDB: 3t32_A*
Probab=75.59 E-value=14 Score=34.82 Aligned_cols=115 Identities=14% Similarity=0.153 Sum_probs=61.9
Q ss_pred HHHHHHHHHHHh----cccCcEEEeccChHHHHHHHHHHHHcCCceEEEEecCCCCcchHHHHHHHHhCCCceEEEc---
Q 045642 185 CREGIAEQAMEL----IHQNEVILTLGHSKFVKEFLCAAKEKKRSFEVFIADGAPKFEGHILAKELDKKGLKAIVIT--- 257 (406)
Q Consensus 185 ~~~~I~~~a~~~----I~~g~~ILT~g~S~tV~~~L~~A~~~~~~f~ViV~EsrP~~eG~~~a~~L~~~GI~vt~I~--- 257 (406)
..+.+++...++ +....+++|.|.+..+..++..+.+.| -+|++. .|.+.|.. ..+...|.++..++
T Consensus 64 ~~~~l~~~l~~~~g~~~~~~~v~~~~g~~~a~~~~~~~l~~~g--d~vl~~--~~~~~~~~--~~~~~~g~~~~~~~~~~ 137 (383)
T 3kax_A 64 IGDIICNWTKKQYNWDIQKEWIVFSAGIVPALSTSIQAFTKEN--ESVLVQ--PPIYPPFF--EMVTTNNRQLCVSPLQK 137 (383)
T ss_dssp HHHHHHHHHHHHHCCCCCGGGEEEESCHHHHHHHHHHHHCCTT--CEEEEC--SSCCHHHH--HHHHHTTCEEEECCCEE
T ss_pred HHHHHHHHHHHHhCCCCChhhEEEcCCHHHHHHHHHHHhCCCC--CEEEEc--CCCcHHHH--HHHHHcCCEEEecccee
Confidence 334555544444 234567888777777777776665333 345544 36676643 33455687776654
Q ss_pred -------c-hHHHHHh-hcCCEEEEcceeEeeCCCcccccchHHHHHHHhhCCCceEE
Q 045642 258 -------D-SAVFAMI-SRVNMVIVGVHAVMANGGVIAPAGLHVLALAAKKHDVPFVV 306 (406)
Q Consensus 258 -------D-sav~~~m-~~vd~VllGAdav~~nG~vvnk~GT~~lAl~Ak~~~vPv~V 306 (406)
| ..+...+ ++...|++ ...--+.|.+...---..++-.|+++++++++
T Consensus 138 ~~~~~~~d~~~l~~~l~~~~~~v~i-~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~ 194 (383)
T 3kax_A 138 QNDTYAIDFEHLEKQFQQGVKLMLL-CSPHNPIGRVWKKEELTKLGSLCTKYNVIVVA 194 (383)
T ss_dssp ETTEEECCHHHHHHHHTTTCCEEEE-ESSBTTTTBCCCHHHHHHHHHHHHHHTCEEEE
T ss_pred cCCcEEEcHHHHHHHhCcCCeEEEE-eCCCCCCCcCcCHHHHHHHHHHHHHCCCEEEE
Confidence 2 1233333 34556655 32222223333322233455568999998887
No 47
>2bfw_A GLGA glycogen synthase; glycosyltransferase family 5 UDP/ADP-glucose-glycogen syntha rossman folds, transferase; 1.8A {Pyrococcus abyssi} SCOP: c.87.1.8
Probab=74.36 E-value=14 Score=31.29 Aligned_cols=100 Identities=13% Similarity=0.093 Sum_probs=59.8
Q ss_pred cccCcEEEeccChH----H---HHHHHHHHH--HcCCceEEEEecCCCCcchHHHHHHHHhCCCceEE----EcchHHHH
Q 045642 197 IHQNEVILTLGHSK----F---VKEFLCAAK--EKKRSFEVFIADGAPKFEGHILAKELDKKGLKAIV----ITDSAVFA 263 (406)
Q Consensus 197 I~~g~~ILT~g~S~----t---V~~~L~~A~--~~~~~f~ViV~EsrP~~eG~~~a~~L~~~GI~vt~----I~Dsav~~ 263 (406)
+.+..+|+..|+-. . +.+++.... +++.+++++++-..+...-..+.+.+.+.| .+++ ++...+..
T Consensus 33 ~~~~~~i~~~G~~~~~~K~~~~li~a~~~l~~~~~~~~~~l~i~G~~~~~~~~~l~~~~~~~~-~v~~~~g~~~~~~~~~ 111 (200)
T 2bfw_A 33 MDEGVTFMFIGRFDRGQKGVDVLLKAIEILSSKKEFQEMRFIIIGKGDPELEGWARSLEEKHG-NVKVITEMLSREFVRE 111 (200)
T ss_dssp CCSCEEEEEESCBCSSSSCHHHHHHHHHHHTTSGGGGGEEEEEECCBCHHHHHHHHHHHHHCT-TEEEECSCCCHHHHHH
T ss_pred CCCCCEEEEeeccccccCCHHHHHHHHHHHHhhccCCCeEEEEECCCChHHHHHHHHHHHhcC-CEEEEeccCCHHHHHH
Confidence 33455777766533 3 333444443 344578888886644112234444555666 7777 45568899
Q ss_pred HhhcCCEEEEcceeEeeCCCcccccchHHHHHHHhhCCCceEEe
Q 045642 264 MISRVNMVIVGVHAVMANGGVIAPAGLHVLALAAKKHDVPFVVV 307 (406)
Q Consensus 264 ~m~~vd~VllGAdav~~nG~vvnk~GT~~lAl~Ak~~~vPv~V~ 307 (406)
+|..+|.+++.... .| .| ...+=|-.+|+||++-
T Consensus 112 ~~~~ad~~l~ps~~---e~-----~~--~~~~Ea~a~G~PvI~~ 145 (200)
T 2bfw_A 112 LYGSVDFVIIPSYF---EP-----FG--LVALEAMCLGAIPIAS 145 (200)
T ss_dssp HHTTCSEEEECCSC---CS-----SC--HHHHHHHHTTCEEEEE
T ss_pred HHHHCCEEEECCCC---CC-----cc--HHHHHHHHCCCCEEEe
Confidence 99999999986532 22 23 2345566789998874
No 48
>3dzz_A Putative pyridoxal 5'-phosphate-dependent C-S LYA; putative PLP-dependent aminotransferase; HET: MSE LLP PG4; 1.61A {Lactobacillus delbrueckii subsp} SCOP: c.67.1.0
Probab=73.69 E-value=25 Score=33.12 Aligned_cols=115 Identities=10% Similarity=0.131 Sum_probs=62.0
Q ss_pred HHHHHHHHHHHh----cccCcEEEeccChHHHHHHHHHHHHcCCceEEEEecCCCCcchHHHHHHHHhCCCceEEEcc--
Q 045642 185 CREGIAEQAMEL----IHQNEVILTLGHSKFVKEFLCAAKEKKRSFEVFIADGAPKFEGHILAKELDKKGLKAIVITD-- 258 (406)
Q Consensus 185 ~~~~I~~~a~~~----I~~g~~ILT~g~S~tV~~~L~~A~~~~~~f~ViV~EsrP~~eG~~~a~~L~~~GI~vt~I~D-- 258 (406)
..+.+++...++ +....+++|.|.+..+..++..+.+.| -+|++ ..|.+.+. ...+...|.++..++-
T Consensus 67 l~~~la~~l~~~~g~~~~~~~i~~~~g~~~a~~~~~~~l~~~g--d~vl~--~~~~~~~~--~~~~~~~g~~~~~~~~~~ 140 (391)
T 3dzz_A 67 YYKAVADWEEIEHRARPKEDWCVFASGVVPAISAMVRQFTSPG--DQILV--QEPVYNMF--YSVIEGNGRRVISSDLIY 140 (391)
T ss_dssp HHHHHHHHHHHHHSCCCCGGGEEEESCHHHHHHHHHHHHSCTT--CEEEE--CSSCCHHH--HHHHHHTTCEEEECCCEE
T ss_pred HHHHHHHHHHHHhCCCCCHHHEEECCCHHHHHHHHHHHhCCCC--CeEEE--CCCCcHHH--HHHHHHcCCEEEEeeeee
Confidence 334455444443 234567777777777777777664333 34554 34666663 2334456877766542
Q ss_pred ---------hHHHHHhh--cCCEEEEcceeEeeCCCcccccchHHHHHHHhhCCCceEE
Q 045642 259 ---------SAVFAMIS--RVNMVIVGVHAVMANGGVIAPAGLHVLALAAKKHDVPFVV 306 (406)
Q Consensus 259 ---------sav~~~m~--~vd~VllGAdav~~nG~vvnk~GT~~lAl~Ak~~~vPv~V 306 (406)
..+-..+. +...|++ ...--+.|.++...--..++-+|++|++++++
T Consensus 141 ~~~~~~~d~~~l~~~l~~~~~~~v~i-~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~ 198 (391)
T 3dzz_A 141 ENSKYSVNWADLEEKLATPSVRMMVF-CNPHNPIGYAWSEEEVKRIAELCAKHQVLLIS 198 (391)
T ss_dssp ETTEEECCHHHHHHHHTSTTEEEEEE-ESSBTTTTBCCCHHHHHHHHHHHHHTTCEEEE
T ss_pred cCCceeecHHHHHHHHhccCceEEEE-ECCCCCCCcccCHHHHHHHHHHHHHCCCEEEE
Confidence 23334443 3434433 22222234444333344566789999998887
No 49
>1qz9_A Kynureninase; kynurenine, tryptophan, PLP, vitamin B6, pyridoxal-5'-phosph hydrolase; HET: PLP P3G; 1.85A {Pseudomonas fluorescens} SCOP: c.67.1.3
Probab=73.46 E-value=19 Score=34.38 Aligned_cols=101 Identities=18% Similarity=0.219 Sum_probs=51.4
Q ss_pred CcEEEeccChHHHHHHHHHHH------HcCCceEEEEecCCCCcchH-HHHHHHHhC---CCceEEEc-chHHHHHhhcC
Q 045642 200 NEVILTLGHSKFVKEFLCAAK------EKKRSFEVFIADGAPKFEGH-ILAKELDKK---GLKAIVIT-DSAVFAMISRV 268 (406)
Q Consensus 200 g~~ILT~g~S~tV~~~L~~A~------~~~~~f~ViV~EsrP~~eG~-~~a~~L~~~---GI~vt~I~-Dsav~~~m~~v 268 (406)
..+++|-|.+..+..++..+. +.|. +|+++. .+.+.+. .....+.+. |.++..++ -..+-..+..-
T Consensus 89 ~~v~~~~g~t~al~~al~~~~~~~~~~~~gd--~vii~~-~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~l~~~i~~~ 165 (416)
T 1qz9_A 89 GEVVVTDTTSINLFKVLSAALRVQATRSPER--RVIVTE-TSNFPTDLYIAEGLADMLQQGYTLRLVDSPEELPQAIDQD 165 (416)
T ss_dssp TSEEECSCHHHHHHHHHHHHHHHHHHHSTTC--CEEEEE-TTSCHHHHHHHHHHHHHHCSSCEEEEESSGGGHHHHCSTT
T ss_pred ccEEEeCChhHHHHHHHHhhcccccccCCCC--cEEEEc-CCCCCchHHHHHHHHHHhcCCceEEEeCcHHHHHHHhCCC
Confidence 357777666655555555543 3343 345443 3344432 222334333 88888886 23333333322
Q ss_pred CEEEEcceeEeeCCCcccccchHHHHHHHhhCCCceEE
Q 045642 269 NMVIVGVHAVMANGGVIAPAGLHVLALAAKKHDVPFVV 306 (406)
Q Consensus 269 d~VllGAdav~~nG~vvnk~GT~~lAl~Ak~~~vPv~V 306 (406)
.++|+-...-...|.+.. -..++-+|+++++++++
T Consensus 166 ~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~ 200 (416)
T 1qz9_A 166 TAVVMLTHVNYKTGYMHD---MQALTALSHECGALAIW 200 (416)
T ss_dssp EEEEEEESBCTTTCBBCC---HHHHHHHHHHHTCEEEE
T ss_pred ceEEEEeccccCcccccC---HHHHHHHHHHcCCEEEE
Confidence 233332222222244333 35677788999988776
No 50
>3fxa_A SIS domain protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 1.60A {Listeria monocytogenes str}
Probab=73.46 E-value=16 Score=31.84 Aligned_cols=36 Identities=14% Similarity=0.097 Sum_probs=30.2
Q ss_pred HHHHHHHHhCCCceEEEcchHHHHHhhcCCEEEEcc
Q 045642 240 HILAKELDKKGLKAIVITDSAVFAMISRVNMVIVGV 275 (406)
Q Consensus 240 ~~~a~~L~~~GI~vt~I~Dsav~~~m~~vd~VllGA 275 (406)
...++.+.+.|+++..|++..-..+.+.+|.+|.-.
T Consensus 109 ~~~~~~ak~~g~~vi~IT~~~~s~l~~~ad~~l~~~ 144 (201)
T 3fxa_A 109 LNLIPACKTKGSTLIGVTENPDSVIAKEADIFFPVS 144 (201)
T ss_dssp HTTHHHHHHHTCEEEEEESCTTSHHHHHCSEEEECC
T ss_pred HHHHHHHHHcCCeEEEEECCCCChhHHhCCEEEEcC
Confidence 567888889999999999988777778899988643
No 51
>3idf_A USP-like protein; universal, stress, PSI, MCSG, structural genomics, midwest center for structural genomics structure initiative; 2.00A {Wolinella succinogenes}
Probab=73.26 E-value=9.8 Score=30.46 Aligned_cols=61 Identities=20% Similarity=0.296 Sum_probs=35.8
Q ss_pred HHHHHhCCCceEEE--cc---hHHHHHhhcCCEEEEcceeEeeCCCcccccchHHHHHHHhhCCCceEEe
Q 045642 243 AKELDKKGLKAIVI--TD---SAVFAMISRVNMVIVGVHAVMANGGVIAPAGLHVLALAAKKHDVPFVVV 307 (406)
Q Consensus 243 a~~L~~~GI~vt~I--~D---sav~~~m~~vd~VllGAdav~~nG~vvnk~GT~~lAl~Ak~~~vPv~V~ 307 (406)
.+.+.+.|+++... .. ..+..+..++|.+++|++. .|++-...|+..-. +.++..+||+|+
T Consensus 72 ~~~~~~~g~~~~~~v~~g~~~~~I~~~a~~~dliV~G~~~---~~~~~~~~Gs~~~~-vl~~~~~pVlvv 137 (138)
T 3idf_A 72 STFFTEKGINPFVVIKEGEPVEMVLEEAKDYNLLIIGSSE---NSFLNKIFASHQDD-FIQKAPIPVLIV 137 (138)
T ss_dssp HHHHHTTTCCCEEEEEESCHHHHHHHHHTTCSEEEEECCT---TSTTSSCCCCTTCH-HHHHCSSCEEEE
T ss_pred HHHHHHCCCCeEEEEecCChHHHHHHHHhcCCEEEEeCCC---cchHHHHhCcHHHH-HHhcCCCCEEEe
Confidence 34455578876543 21 2333344489999999975 23333333654433 345667999986
No 52
>1wv2_A Thiazole moeity, thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI; 2.90A {Pseudomonas aeruginosa} SCOP: c.1.31.1
Probab=73.06 E-value=12 Score=35.02 Aligned_cols=113 Identities=20% Similarity=0.273 Sum_probs=66.9
Q ss_pred HHHHhccc-CcEEEe-ccChHHHHHHHHHHH---H---cCCceEEEEe-cCC---CCcch-HHHHHHHHhCCCceE-EEc
Q 045642 192 QAMELIHQ-NEVILT-LGHSKFVKEFLCAAK---E---KKRSFEVFIA-DGA---PKFEG-HILAKELDKKGLKAI-VIT 257 (406)
Q Consensus 192 ~a~~~I~~-g~~ILT-~g~S~tV~~~L~~A~---~---~~~~f~ViV~-Esr---P~~eG-~~~a~~L~~~GI~vt-~I~ 257 (406)
...++|.. +-++|- .+..+|++..++.|. + ...-+++.|. |.+ |.... ...++.|.+.|+.|. |+.
T Consensus 64 ~~~~~i~~~~~~~lpNTag~~ta~eAv~~a~lare~~~~~~~iKlEv~~d~~~llpD~~~tv~aa~~L~~~Gf~Vlpy~~ 143 (265)
T 1wv2_A 64 NLLDVIPPDRYTILPNTAGCYDAVEAVRTCRLARELLDGHNLVKLEVLADQKTLFPNVVETLKAAEQLVKDGFDVMVYTS 143 (265)
T ss_dssp ------CTTTSEEEEECTTCCSHHHHHHHHHHHHTTTTSCCEEEECCBSCTTTCCBCHHHHHHHHHHHHTTTCEEEEEEC
T ss_pred hHHhhhhhcCCEECCcCCCCCCHHHHHHHHHHHHHHcCCCCeEEEEeecCccccCcCHHHHHHHHHHHHHCCCEEEEEeC
Confidence 44456765 556664 566677777776553 2 1234667666 444 33333 678999999999998 676
Q ss_pred chHH-HHHhhcCCEEEEcceeEeeCCCcccc----cchHHHHHHHhhCCCceEEecC
Q 045642 258 DSAV-FAMISRVNMVIVGVHAVMANGGVIAP----AGLHVLALAAKKHDVPFVVVAS 309 (406)
Q Consensus 258 Dsav-~~~m~~vd~VllGAdav~~nG~vvnk----~GT~~lAl~Ak~~~vPv~V~ae 309 (406)
|+-+ +..+.++ |+++|++-|..+.. .--..+..+.+..++||++-+.
T Consensus 144 dd~~~akrl~~~-----G~~aVmPlg~pIGsG~Gi~~~~lI~~I~e~~~vPVI~eGG 195 (265)
T 1wv2_A 144 DDPIIARQLAEI-----GCIAVMPLAGLIGSGLGICNPYNLRIILEEAKVPVLVDAG 195 (265)
T ss_dssp SCHHHHHHHHHS-----CCSEEEECSSSTTCCCCCSCHHHHHHHHHHCSSCBEEESC
T ss_pred CCHHHHHHHHHh-----CCCEEEeCCccCCCCCCcCCHHHHHHHHhcCCCCEEEeCC
Confidence 6644 5556655 66777664543221 1134566777778999998654
No 53
>1k6d_A Acetate COA-transferase alpha subunit; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.90A {Escherichia coli} SCOP: c.124.1.2
Probab=73.01 E-value=13 Score=33.76 Aligned_cols=43 Identities=21% Similarity=0.344 Sum_probs=29.2
Q ss_pred cCCEEEEcceeEeeCCCccccc--c--hHHHHHHHhhCCCceEEecCCccccc
Q 045642 267 RVNMVIVGVHAVMANGGVIAPA--G--LHVLALAAKKHDVPFVVVASTHELCS 315 (406)
Q Consensus 267 ~vd~VllGAdav~~nG~vvnk~--G--T~~lAl~Ak~~~vPv~V~aes~K~~~ 315 (406)
++|..|+-|...-.+|.+.-.. + +..+|.+|| .|+++.-++.|
T Consensus 148 ~~DVAli~a~~aD~~Gn~~~~~~~~~~~~~~a~aA~------~VIveVn~~vp 194 (220)
T 1k6d_A 148 RADLALIRAHRCDTLGNLTYQLSARNFNPLIALAAD------ITLVEPDELVE 194 (220)
T ss_dssp CEEEEEEEEEEEETTCCEECCHHHHTTHHHHHHHEE------EEEEEEEEEEC
T ss_pred CCcEEEEEeecCCCCceEEEecCCccccHHHHHhcC------EEEEEEccccC
Confidence 5799999999999999877542 2 234566665 55665555554
No 54
>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2
Probab=72.61 E-value=9.7 Score=35.16 Aligned_cols=103 Identities=12% Similarity=0.116 Sum_probs=59.5
Q ss_pred CcEEEeccChHHHHHHHHH-HHHcCCceEEEEecCCCCc---chHHHHHHHHhCCCceEEE--cc-hHHHHHhhcCCEEE
Q 045642 200 NEVILTLGHSKFVKEFLCA-AKEKKRSFEVFIADGAPKF---EGHILAKELDKKGLKAIVI--TD-SAVFAMISRVNMVI 272 (406)
Q Consensus 200 g~~ILT~g~S~tV~~~L~~-A~~~~~~f~ViV~EsrP~~---eG~~~a~~L~~~GI~vt~I--~D-sav~~~m~~vd~Vl 272 (406)
..+||+.|.++.+=..+.. ..+.| ++|+++.-.+.. +.....+.|...|+.+... .| .++..+++.+|.||
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~g--~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~d~vi 81 (313)
T 1qyd_A 4 KSRVLIVGGTGYIGKRIVNASISLG--HPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASLDDHQRLVDALKQVDVVI 81 (313)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHTT--CCEEEECCSCCSSCHHHHHHHHHHHTTTCEEECCCSSCHHHHHHHHTTCSEEE
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhCC--CcEEEEECCCcccchhHHHHHHHHHhCCeEEEeCCCCCHHHHHHHHhCCCEEE
Confidence 3468888876655444433 33334 677776544432 1222334555667654322 23 35666777777776
Q ss_pred EcceeEeeCCCcccccchHHHHHHHhhCC-CceEEe
Q 045642 273 VGVHAVMANGGVIAPAGLHVLALAAKKHD-VPFVVV 307 (406)
Q Consensus 273 lGAdav~~nG~vvnk~GT~~lAl~Ak~~~-vPv~V~ 307 (406)
.-|-.... -.|-.|+..++-+|+..+ ++-+|.
T Consensus 82 ~~a~~~~~---~~~~~~~~~l~~aa~~~g~v~~~v~ 114 (313)
T 1qyd_A 82 SALAGGVL---SHHILEQLKLVEAIKEAGNIKRFLP 114 (313)
T ss_dssp ECCCCSSS---STTTTTHHHHHHHHHHSCCCSEEEC
T ss_pred ECCccccc---hhhHHHHHHHHHHHHhcCCCceEEe
Confidence 54422111 126778999999999998 887774
No 55
>3etn_A Putative phosphosugar isomerase involved in capsu formation; YP_209877.1; HET: MSE CMK; 1.70A {Bacteroides fragilis nctc 9343}
Probab=72.61 E-value=12 Score=33.53 Aligned_cols=108 Identities=19% Similarity=0.153 Sum_probs=62.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc-----CcEEEeccC--hHHHHHHHHHHH-HcCCce----------
Q 045642 165 KKLKSELIKAVNELIEDINTCREGIAEQAMELIHQ-----NEVILTLGH--SKFVKEFLCAAK-EKKRSF---------- 226 (406)
Q Consensus 165 ~~~k~~l~~~i~~~~~e~~~~~~~I~~~a~~~I~~-----g~~ILT~g~--S~tV~~~L~~A~-~~~~~f---------- 226 (406)
.++.+.+.+.++++.+.++. .-.+.+++.|.+ ...|..+|. |..+...+.... +-|...
T Consensus 22 ~~~~~~~~~~i~~t~~~ld~---~~i~~~~~~i~~~a~~~a~~I~i~G~G~S~~~A~~~~~~l~~lg~~~~~~~~~~~~~ 98 (220)
T 3etn_A 22 ESIQELLQKEAQAVLNIPVT---DAYEKAVELIVEQIHRKKGKLVTSGMGKAGQIAMNIATTFCSTGIPSVFLHPSEAQH 98 (220)
T ss_dssp HHHHHHHHHHHHHHHTCCCC---THHHHHHHHHHHHTTTTCCCEEEECSHHHHHHHHHHHHHHHHTTCCEEECCTTGGGB
T ss_pred HHHHHHHHHHHHHHHHhcCH---HHHHHHHHHHHhHhhccCCEEEEEEecHHHHHHHHHHHHHHhcCCcEEEeCCHHHHH
Confidence 66667777777766654331 112233344444 667777654 555544443322 112111
Q ss_pred ---------EEEEecCCCC--cchHHHHHHHHh--CCCceEEEcchHHHHHhhcCCEEEEcc
Q 045642 227 ---------EVFIADGAPK--FEGHILAKELDK--KGLKAIVITDSAVFAMISRVNMVIVGV 275 (406)
Q Consensus 227 ---------~ViV~EsrP~--~eG~~~a~~L~~--~GI~vt~I~Dsav~~~m~~vd~VllGA 275 (406)
.|+++=|..+ .+-...++.+.+ .|+++..|++..-..+.+.+|.+|.-.
T Consensus 99 ~~~~~~~~~DlvI~iS~SG~t~~~i~~~~~ak~~~~Ga~vI~IT~~~~s~La~~aD~~l~~~ 160 (220)
T 3etn_A 99 GDLGILQENDLLLLISNSGKTREIVELTQLAHNLNPGLKFIVITGNPDSPLASESDVCLSTG 160 (220)
T ss_dssp TGGGGCCTTCEEEEECSSSCCHHHHHHHHHHHHHCTTCEEEEEESCTTSHHHHHSSEEEECC
T ss_pred hhhccCCCCCEEEEEcCCCCCHHHHHHHHHHHhcCCCCeEEEEECCCCChhHHhCCEEEEcC
Confidence 1222222222 233577888999 999999999987777778899988743
No 56
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=72.25 E-value=17 Score=33.26 Aligned_cols=107 Identities=14% Similarity=0.083 Sum_probs=68.5
Q ss_pred HHHHHhcccCcEEEeccChHHHHHHHHHHHHcCCceEEEEecCCCC------------------cchHHHHHHHHhC--C
Q 045642 191 EQAMELIHQNEVILTLGHSKFVKEFLCAAKEKKRSFEVFIADGAPK------------------FEGHILAKELDKK--G 250 (406)
Q Consensus 191 ~~a~~~I~~g~~ILT~g~S~tV~~~L~~A~~~~~~f~ViV~EsrP~------------------~eG~~~a~~L~~~--G 250 (406)
..+.+.+. +..|+..|....=..+++...+.|.. ++.+++..+- ..-..+++.|.+. +
T Consensus 23 ~~~q~~l~-~~~VlVvG~Gg~G~~va~~La~~Gv~-~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~ 100 (249)
T 1jw9_B 23 FDGQEALK-DSRVLIVGLGGLGCAASQYLASAGVG-NLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRINPH 100 (249)
T ss_dssp HHHHHHHH-HCEEEEECCSHHHHHHHHHHHHHTCS-EEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTT
T ss_pred HHHHHHHh-CCeEEEEeeCHHHHHHHHHHHHcCCC-eEEEEcCCCcccccCCcccccChhhcCcHHHHHHHHHHHHHCCC
Confidence 33444443 35788888877777777776666643 5666665541 1123566777764 5
Q ss_pred CceEEEc----chHHHHHhhcCCEEEEcceeEeeCCCcccccchHHHHHHHhhCCCceEEec
Q 045642 251 LKAIVIT----DSAVFAMISRVNMVIVGVHAVMANGGVIAPAGLHVLALAAKKHDVPFVVVA 308 (406)
Q Consensus 251 I~vt~I~----Dsav~~~m~~vd~VllGAdav~~nG~vvnk~GT~~lAl~Ak~~~vPv~V~a 308 (406)
+.++.+. +..+..+++++|.||...|..- --+.+..+|+.+++|++..+
T Consensus 101 ~~v~~~~~~~~~~~~~~~~~~~DvVi~~~d~~~---------~~~~l~~~~~~~~~p~i~~~ 153 (249)
T 1jw9_B 101 IAITPVNALLDDAELAALIAEHDLVLDCTDNVA---------VRNQLNAGCFAAKVPLVSGA 153 (249)
T ss_dssp SEEEEECSCCCHHHHHHHHHTSSEEEECCSSHH---------HHHHHHHHHHHHTCCEEEEE
T ss_pred cEEEEEeccCCHhHHHHHHhCCCEEEEeCCCHH---------HHHHHHHHHHHcCCCEEEee
Confidence 6666543 3345566889999998876532 23667788889999998763
No 57
>1tk9_A Phosphoheptose isomerase 1; lipopolysaccharide biosynthesis, structural genomics, NYSGXRC, LPC1_camje, PSI, protein structure initiative; 2.10A {Campylobacter jejuni} SCOP: c.80.1.3
Probab=72.02 E-value=28 Score=29.62 Aligned_cols=35 Identities=9% Similarity=-0.057 Sum_probs=29.0
Q ss_pred HHHHHHHHhCCCceEEEcchHHHHHhhcCCEEEEc
Q 045642 240 HILAKELDKKGLKAIVITDSAVFAMISRVNMVIVG 274 (406)
Q Consensus 240 ~~~a~~L~~~GI~vt~I~Dsav~~~m~~vd~VllG 274 (406)
...++.+++.|+++..|++..-..+.+.+|.+|.-
T Consensus 127 ~~~~~~ak~~g~~vi~iT~~~~s~L~~~ad~~l~~ 161 (188)
T 1tk9_A 127 LEALKKAKELNMLCLGLSGKGGGMMNKLCDHNLVV 161 (188)
T ss_dssp HHHHHHHHHTTCEEEEEEEGGGTTHHHHCSEEEEE
T ss_pred HHHHHHHHHCCCEEEEEeCCCCcchHHcCCEEEEe
Confidence 57788888999999999998777777788988743
No 58
>2e7j_A SEP-tRNA:Cys-tRNA synthase; seven-stranded BETE-strand, lyase, structural genomics; HET: PLP; 2.40A {Archaeoglobus fulgidus} SCOP: c.67.1.9 PDB: 2e7i_A*
Probab=71.75 E-value=34 Score=31.87 Aligned_cols=103 Identities=14% Similarity=0.137 Sum_probs=58.6
Q ss_pred HHhcccCcEEEeccChHHHHHHHHHHHHcCCceEEEEecCCCCcchHHHHHHHHhCCCceEEEc---c-------hHHHH
Q 045642 194 MELIHQNEVILTLGHSKFVKEFLCAAKEKKRSFEVFIADGAPKFEGHILAKELDKKGLKAIVIT---D-------SAVFA 263 (406)
Q Consensus 194 ~~~I~~g~~ILT~g~S~tV~~~L~~A~~~~~~f~ViV~EsrP~~eG~~~a~~L~~~GI~vt~I~---D-------sav~~ 263 (406)
++++....+++|.|.+..+..++..+.+ +.-+|++. .|.+.|...+ +...|+++..++ | ..+-.
T Consensus 64 a~~~~~~~v~~~~g~t~a~~~~~~~~~~--~gd~vl~~--~~~~~~~~~~--~~~~g~~~~~v~~~~~~~~~~d~~~l~~ 137 (371)
T 2e7j_A 64 PKFLGCDVARVTNGAREAKFAVMHSLAK--KDAWVVMD--ENCHYSSYVA--AERAGLNIALVPKTDYPDYAITPENFAQ 137 (371)
T ss_dssp HHHTTSSEEEEESSHHHHHHHHHHHHCC--TTCEEEEE--TTCCHHHHHH--HHHTTCEEEEECCCCTTTCCCCHHHHHH
T ss_pred HHHcCCCEEEEeCChHHHHHHHHHHHhC--CCCEEEEc--cCcchHHHHH--HHHcCCeEEEeecccCCCCCcCHHHHHH
Confidence 3444433566666666677666666643 23355555 4666665444 667899988887 2 13333
Q ss_pred Hhh------cCCEEEEcceeEeeCCCcccccchHHHHHHHhhCCCceEE
Q 045642 264 MIS------RVNMVIVGVHAVMANGGVIAPAGLHVLALAAKKHDVPFVV 306 (406)
Q Consensus 264 ~m~------~vd~VllGAdav~~nG~vvnk~GT~~lAl~Ak~~~vPv~V 306 (406)
.+. ++ ++++-...--..|.+.. . ..++-+|+++++++++
T Consensus 138 ~l~~~~~~~~~-~~v~~~~~~nptG~~~~-~--~~i~~~~~~~~~~li~ 182 (371)
T 2e7j_A 138 TIEETKKRGEV-VLALITYPDGNYGNLPD-V--KKIAKVCSEYDVPLLV 182 (371)
T ss_dssp HHHHHTTTSCE-EEEEEESSCTTTCCCCC-H--HHHHHHHHTTTCCEEE
T ss_pred HHHhhcccCCe-EEEEEECCCCCCcccCC-H--HHHHHHHHHcCCeEEE
Confidence 443 33 33332222222344443 2 6778889999998886
No 59
>3trj_A Phosphoheptose isomerase; lipopolysaccharide biosynthesis; 2.80A {Francisella tularensis subsp}
Probab=71.55 E-value=33 Score=30.13 Aligned_cols=34 Identities=15% Similarity=0.104 Sum_probs=26.1
Q ss_pred HHHHHHHHhCCCceEEEcchHHHHHhhcC---CEEEE
Q 045642 240 HILAKELDKKGLKAIVITDSAVFAMISRV---NMVIV 273 (406)
Q Consensus 240 ~~~a~~L~~~GI~vt~I~Dsav~~~m~~v---d~Vll 273 (406)
...++.+++.|+++..|++..-+.+.+.+ |.+|.
T Consensus 131 ~~~~~~ak~~g~~vi~iT~~~~s~la~~a~~~d~~l~ 167 (201)
T 3trj_A 131 LSAVEEAHDLEMKVIALTGGSGGALQNMYNTDDIELR 167 (201)
T ss_dssp HHHHHHHHHTTCEEEEEEETTCCGGGGTCCTTCEEEE
T ss_pred HHHHHHHHHCCCcEEEEECCCCCHHHHhhccCCEEEE
Confidence 56778888889999999887666666667 77765
No 60
>3npg_A Uncharacterized DUF364 family protein; protein with unknown function from DUF364 family, structural genomics; 2.70A {Pyrococcus horikoshii}
Probab=71.45 E-value=3.3 Score=38.65 Aligned_cols=124 Identities=19% Similarity=0.225 Sum_probs=74.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhc--ccCcEEEeccChHHHHHHHHHHHHcCCceEEEEecCCCCcchHHHHHH
Q 045642 168 KSELIKAVNELIEDINTCREGIAEQAMELI--HQNEVILTLGHSKFVKEFLCAAKEKKRSFEVFIADGAPKFEGHILAKE 245 (406)
Q Consensus 168 k~~l~~~i~~~~~e~~~~~~~I~~~a~~~I--~~g~~ILT~g~S~tV~~~L~~A~~~~~~f~ViV~EsrP~~eG~~~a~~ 245 (406)
|..-+..++.+.+......+.....+.+++ ..+..|..+|+-.-+.+.|. ++ ++|+|+|-.|..-|.
T Consensus 82 ralgiAaiNAv~~~~~~~~~~~~~d~~~~~~~~~~~kV~vIG~~p~l~~~l~-----~~-~~v~V~d~~p~~~~~----- 150 (249)
T 3npg_A 82 RTLGVAAINAVSQYYIDLREAKWIDVTELIQQDEIKRIAIIGNMPPVVRTLK-----EK-YEVYVFERNMKLWDR----- 150 (249)
T ss_dssp HHHHHHHHHHHHHHHCCCTTCBCCCHHHHHHTSCCSEEEEESCCHHHHHHHT-----TT-SEEEEECCSGGGCCS-----
T ss_pred HHHHHHHHHHhhhhccccCCccccCHHHHHhhcCCCEEEEECCCHHHHHHHh-----cc-CCEEEEECCCcccCC-----
Confidence 445556666655432100000011333444 45588999999876555442 23 799999999976432
Q ss_pred HHhCCCceEEEcchHHHHHhhcCCEEEEcceeEeeCCCcccccchHHHHHHHhhCCCceEEecCCccccccCC
Q 045642 246 LDKKGLKAIVITDSAVFAMISRVNMVIVGVHAVMANGGVIAPAGLHVLALAAKKHDVPFVVVASTHELCSLYP 318 (406)
Q Consensus 246 L~~~GI~vt~I~Dsav~~~m~~vd~VllGAdav~~nG~vvnk~GT~~lAl~Ak~~~vPv~V~aes~K~~~~~~ 318 (406)
+ ..+|+....+++++|.|++-..++. |++=-..+.++ ....+++++.+|--++|..-
T Consensus 151 ----~----~~~~~~e~~~l~~~D~v~iTGsTlv------N~Ti~~lL~~~--~~~~~vvl~GPS~~~~P~~~ 207 (249)
T 3npg_A 151 ----D----TYSDTLEYHILPEVDGIIASASCIV------NGTLDMILDRA--KKAKLIVITGPTGQLLPEFL 207 (249)
T ss_dssp ----S----EECGGGHHHHGGGCSEEEEETTHHH------HTCHHHHHHHC--SSCSEEEEESGGGCSCGGGG
T ss_pred ----C----CCChhHHHhhhccCCEEEEEeeeec------cCCHHHHHHhC--cccCeEEEEecCchhhHHHH
Confidence 1 2367666679999999999765533 33222233332 34568899999988877543
No 61
>2xhz_A KDSD, YRBH, arabinose 5-phosphate isomerase; lipopolysaccharide biogenesis; 2.60A {Escherichia coli}
Probab=71.23 E-value=20 Score=30.53 Aligned_cols=36 Identities=17% Similarity=0.121 Sum_probs=30.4
Q ss_pred HHHHHHHHhCCCceEEEcchHHHHHhhcCCEEEEcc
Q 045642 240 HILAKELDKKGLKAIVITDSAVFAMISRVNMVIVGV 275 (406)
Q Consensus 240 ~~~a~~L~~~GI~vt~I~Dsav~~~m~~vd~VllGA 275 (406)
...++.+.+.|+++..|++..-..+.+.+|.+|.-.
T Consensus 113 ~~~~~~ak~~g~~vi~IT~~~~s~la~~ad~~l~~~ 148 (183)
T 2xhz_A 113 TALIPVLKRLHVPLICITGRPESSMARAADVHLCVK 148 (183)
T ss_dssp HHHHHHHHTTTCCEEEEESCTTSHHHHHSSEEEECC
T ss_pred HHHHHHHHHCCCCEEEEECCCCChhHHhCCEEEEeC
Confidence 577888899999999999987777778899887654
No 62
>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*
Probab=70.06 E-value=11 Score=35.01 Aligned_cols=96 Identities=11% Similarity=0.152 Sum_probs=57.8
Q ss_pred EEEeccChHHHHHHHHH-HHHcCCceEEEEecCCCCcchHHHHHHHHhCCCceEEE--cc-hHHHHHhhcCCEEEEccee
Q 045642 202 VILTLGHSKFVKEFLCA-AKEKKRSFEVFIADGAPKFEGHILAKELDKKGLKAIVI--TD-SAVFAMISRVNMVIVGVHA 277 (406)
Q Consensus 202 ~ILT~g~S~tV~~~L~~-A~~~~~~f~ViV~EsrP~~eG~~~a~~L~~~GI~vt~I--~D-sav~~~m~~vd~VllGAda 277 (406)
+||+.|.++.+=..+.. ..++| ++|+++.-.|. ......+.|...|+.+... .| .++..+++.+|.||.-
T Consensus 13 ~ilVtGatG~iG~~l~~~L~~~g--~~V~~l~R~~~-~~~~~~~~l~~~~v~~v~~Dl~d~~~l~~a~~~~d~vi~~--- 86 (318)
T 2r6j_A 13 KILIFGGTGYIGNHMVKGSLKLG--HPTYVFTRPNS-SKTTLLDEFQSLGAIIVKGELDEHEKLVELMKKVDVVISA--- 86 (318)
T ss_dssp CEEEETTTSTTHHHHHHHHHHTT--CCEEEEECTTC-SCHHHHHHHHHTTCEEEECCTTCHHHHHHHHTTCSEEEEC---
T ss_pred eEEEECCCchHHHHHHHHHHHCC--CcEEEEECCCC-chhhHHHHhhcCCCEEEEecCCCHHHHHHHHcCCCEEEEC---
Confidence 68888876655444433 33334 56776655443 2223345566778766433 22 3566667766655543
Q ss_pred EeeCCCcccccchHHHHHHHhhCC-CceEEe
Q 045642 278 VMANGGVIAPAGLHVLALAAKKHD-VPFVVV 307 (406)
Q Consensus 278 v~~nG~vvnk~GT~~lAl~Ak~~~-vPv~V~ 307 (406)
.+..+-.|+..+.-+|+..+ ++-+|.
T Consensus 87 ----a~~~~~~~~~~l~~aa~~~g~v~~~v~ 113 (318)
T 2r6j_A 87 ----LAFPQILDQFKILEAIKVAGNIKRFLP 113 (318)
T ss_dssp ----CCGGGSTTHHHHHHHHHHHCCCCEEEC
T ss_pred ----CchhhhHHHHHHHHHHHhcCCCCEEEe
Confidence 34444678888888999888 887774
No 63
>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}
Probab=69.55 E-value=10 Score=34.96 Aligned_cols=99 Identities=15% Similarity=0.135 Sum_probs=56.8
Q ss_pred CcEEEeccChHHHHHHHHH-HHHcCCceEEEEecCCC-Cc----chHHHHHHHHhCCCceEEE--cc-hHHHHHhhcCCE
Q 045642 200 NEVILTLGHSKFVKEFLCA-AKEKKRSFEVFIADGAP-KF----EGHILAKELDKKGLKAIVI--TD-SAVFAMISRVNM 270 (406)
Q Consensus 200 g~~ILT~g~S~tV~~~L~~-A~~~~~~f~ViV~EsrP-~~----eG~~~a~~L~~~GI~vt~I--~D-sav~~~m~~vd~ 270 (406)
+.+||+.|.++.+=..+.. +.++| ++|+++.-.+ .. +.....+.|...|+.+... .| .++..+++.+|.
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g--~~V~~~~R~~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d~~~l~~~~~~~d~ 79 (307)
T 2gas_A 2 ENKILILGPTGAIGRHIVWASIKAG--NPTYALVRKTITAANPETKEELIDNYQSLGVILLEGDINDHETLVKAIKQVDI 79 (307)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHHT--CCEEEEECCSCCSSCHHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHTTCSE
T ss_pred CcEEEEECCCchHHHHHHHHHHhCC--CcEEEEECCCcccCChHHHHHHHHHHHhCCCEEEEeCCCCHHHHHHHHhCCCE
Confidence 3467887876655444333 33344 5666664443 11 2222345666778765432 22 345666776665
Q ss_pred EEEcceeEeeCCCcccccchHHHHHHHhhCC-CceEEe
Q 045642 271 VIVGVHAVMANGGVIAPAGLHVLALAAKKHD-VPFVVV 307 (406)
Q Consensus 271 VllGAdav~~nG~vvnk~GT~~lAl~Ak~~~-vPv~V~ 307 (406)
||. +.+...-.|+..++-+|+..+ ++-+|.
T Consensus 80 vi~-------~a~~~~~~~~~~l~~aa~~~g~v~~~v~ 110 (307)
T 2gas_A 80 VIC-------AAGRLLIEDQVKIIKAIKEAGNVKKFFP 110 (307)
T ss_dssp EEE-------CSSSSCGGGHHHHHHHHHHHCCCSEEEC
T ss_pred EEE-------CCcccccccHHHHHHHHHhcCCceEEee
Confidence 554 334444668888888999888 887774
No 64
>2zc0_A Alanine glyoxylate transaminase; alanine:glyoxylate aminotransferase, archaea, thermococcus L transferase; HET: PMP; 2.30A {Thermococcus litoralis}
Probab=69.48 E-value=47 Score=31.54 Aligned_cols=129 Identities=15% Similarity=0.135 Sum_probs=69.6
Q ss_pred HHHHHHHHHHHHHH------HH--HHHHHHHHHHHHHHHhc----ccCcEEEeccChHHHHHHHHHHHHcCCceEEEEec
Q 045642 165 KKLKSELIKAVNEL------IE--DINTCREGIAEQAMELI----HQNEVILTLGHSKFVKEFLCAAKEKKRSFEVFIAD 232 (406)
Q Consensus 165 ~~~k~~l~~~i~~~------~~--e~~~~~~~I~~~a~~~I----~~g~~ILT~g~S~tV~~~L~~A~~~~~~f~ViV~E 232 (406)
+.+++.+.+.++.. -. .....++.+++...++. ....+++|.|.+..+..++..+.+.| -+|++.+
T Consensus 52 ~~v~~a~~~~~~~~~~~~~y~~~~~~~~l~~~la~~~~~~~g~~~~~~~v~~t~g~t~a~~~~~~~~~~~g--d~vl~~~ 129 (407)
T 2zc0_A 52 AVLGEIAKEVLEKEPKSVMYTPANGIPELREELAAFLKKYDHLEVSPENIVITIGGTGALDLLGRVLIDPG--DVVITEN 129 (407)
T ss_dssp HHHHHHHHHHHHHCGGGGSCCCTTCCHHHHHHHHHHHHHHSCCCCCGGGEEEESHHHHHHHHHHHHHCCTT--CEEEEEE
T ss_pred HHHHHHHHHHHhhccccccCCCCCCCHHHHHHHHHHHHHhcCCCCCcceEEEecCHHHHHHHHHHHhcCCC--CEEEEeC
Confidence 45555555555431 11 13445566666554322 24467788777777777777664333 3566554
Q ss_pred CCCCcchHHHHHHHHhCCCceEEEcc-------hHHHHHhh-------cCCEEEEcceeEeeCCCcccccch-------H
Q 045642 233 GAPKFEGHILAKELDKKGLKAIVITD-------SAVFAMIS-------RVNMVIVGVHAVMANGGVIAPAGL-------H 291 (406)
Q Consensus 233 srP~~eG~~~a~~L~~~GI~vt~I~D-------sav~~~m~-------~vd~VllGAdav~~nG~vvnk~GT-------~ 291 (406)
|.+.|. ...+...|+++..++- ..+...+. ++..|++-. ..-|..|+ .
T Consensus 130 --p~~~~~--~~~~~~~g~~~~~v~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~~~~-------~~~nptG~~~~~~~l~ 198 (407)
T 2zc0_A 130 --PSYINT--LLAFEQLGAKIEGVPVDNDGMRVDLLEEKIKELKAKGQKVKLIYTIP-------TGQNPMGVTMSMERRK 198 (407)
T ss_dssp --SCCHHH--HHHHHTTTCEEEEEEEETTEECHHHHHHHHHHHHHTTCCEEEEEECC-------SSCTTTCCCCCHHHHH
T ss_pred --CChHHH--HHHHHHcCCEEEEcccCCCCCCHHHHHHHHHhhhcccCCceEEEECC-------CCCCCCCcCCCHHHHH
Confidence 666664 3344567888777642 23333443 222222211 22334444 2
Q ss_pred HHHHHHhhCCCceEE
Q 045642 292 VLALAAKKHDVPFVV 306 (406)
Q Consensus 292 ~lAl~Ak~~~vPv~V 306 (406)
.++-.|+++++++++
T Consensus 199 ~i~~~~~~~~~~li~ 213 (407)
T 2zc0_A 199 ALLEIASKYDLLIIE 213 (407)
T ss_dssp HHHHHHHHHTCEEEE
T ss_pred HHHHHHHHcCCEEEE
Confidence 677788999998886
No 65
>2gm3_A Unknown protein; AT3G01520, putative ethylene-responsive protein, USP domain, nucleotide binding domain, AMP; HET: MSE AMP; 2.46A {Arabidopsis thaliana} SCOP: c.26.2.4
Probab=68.32 E-value=18 Score=30.29 Aligned_cols=49 Identities=16% Similarity=0.270 Sum_probs=28.9
Q ss_pred cCCEEEEcceeEeeCCCccc-ccchHHHHHHHhhCCCceEEecCCccccccCCC
Q 045642 267 RVNMVIVGVHAVMANGGVIA-PAGLHVLALAAKKHDVPFVVVASTHELCSLYPH 319 (406)
Q Consensus 267 ~vd~VllGAdav~~nG~vvn-k~GT~~lAl~Ak~~~vPv~V~aes~K~~~~~~~ 319 (406)
++|+||+|++.- |++-. -.|+..-.+ .++..+||+|+-+..+-.|..|+
T Consensus 124 ~~DLIVmG~~g~---~~~~~~~~Gsva~~v-l~~a~~pVlvv~~~~~~~~~~p~ 173 (175)
T 2gm3_A 124 RPDFLVVGSRGL---GRFQKVFVGTVSAFC-VKHAECPVMTIKRNADETPSDPA 173 (175)
T ss_dssp CCSEEEEEECCC---C--------CHHHHH-HHHCSSCEEEEECCGGGSCSSTT
T ss_pred CCCEEEEeCCCC---ChhhhhhcCchHHHH-HhCCCCCEEEEcCCcCCCCCCCC
Confidence 699999999752 33322 356655444 45567999999766655555444
No 66
>3lvm_A Cysteine desulfurase; structural genomics, montreal-kingston bacterial structural genomics initiative, BSGI, transferase; HET: PLP; 2.05A {Escherichia coli} PDB: 3lvk_A* 3lvl_B* 3lvj_A* 1p3w_B*
Probab=68.25 E-value=67 Score=30.54 Aligned_cols=102 Identities=12% Similarity=0.212 Sum_probs=57.9
Q ss_pred CcEEEeccChHHHHHHHHHHHH--cCCceEEEEecCCCCcchH-HHHHHHHhCCCceEEEcch--------HHHHHhhcC
Q 045642 200 NEVILTLGHSKFVKEFLCAAKE--KKRSFEVFIADGAPKFEGH-ILAKELDKKGLKAIVITDS--------AVFAMISRV 268 (406)
Q Consensus 200 g~~ILT~g~S~tV~~~L~~A~~--~~~~f~ViV~EsrP~~eG~-~~a~~L~~~GI~vt~I~Ds--------av~~~m~~v 268 (406)
..+++|.|.+..+..++..+.+ .++.-+|++. .|.+.+. ..+..+...|+++..++-. .+-..+.+=
T Consensus 86 ~~v~~~~ggt~a~~~a~~~l~~~~~~~gd~Vl~~--~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~ 163 (423)
T 3lvm_A 86 REIVFTSGATESDNLAIKGAANFYQKKGKHIITS--KTEHKAVLDTCRQLEREGFEVTYLAPQRNGIIDLKELEAAMRDD 163 (423)
T ss_dssp GGEEEESSHHHHHHHHHHHHHHHHTTTCCEEEEE--TTSCHHHHHHHHHHHHTTCEEEEECCCTTSCCCHHHHHHHCCTT
T ss_pred CeEEEeCChHHHHHHHHHHHHHhhccCCCEEEEC--CccchHHHHHHHHHHHcCCEEEEeccCCCCccCHHHHHHhcCCC
Confidence 3678888877777777665553 2223455554 4555553 4455557789998888622 233333322
Q ss_pred CEEEEcceeEeeCCCcccccchHHHHHHHhhCCCceEE
Q 045642 269 NMVIVGVHAVMANGGVIAPAGLHVLALAAKKHDVPFVV 306 (406)
Q Consensus 269 d~VllGAdav~~nG~vvnk~GT~~lAl~Ak~~~vPv~V 306 (406)
.++++-...--..|.+.. --.++-+|+.+++++++
T Consensus 164 ~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~ 198 (423)
T 3lvm_A 164 TILVSIMHVNNEIGVVQD---IAAIGEMCRARGIIYHV 198 (423)
T ss_dssp EEEEECCSBCTTTCBBCC---HHHHHHHHHHHTCEEEE
T ss_pred cEEEEEeCCCCCCccccC---HHHHHHHHHHcCCEEEE
Confidence 244442222223344333 34577788999988876
No 67
>2w48_A Sorbitol operon regulator; SORC, activator, repressor, DNA-binding, transcription, transcription regulator, transcription regulation; 3.20A {Klebsiella pneumoniae}
Probab=68.18 E-value=8.7 Score=36.52 Aligned_cols=89 Identities=9% Similarity=0.235 Sum_probs=56.1
Q ss_pred HHHHHHHHHh----cccCcEEEeccChHHHHHHHHHHHHc--CCceEEEEecC------CCCcchHHHHHHHHhC-CCce
Q 045642 187 EGIAEQAMEL----IHQNEVILTLGHSKFVKEFLCAAKEK--KRSFEVFIADG------APKFEGHILAKELDKK-GLKA 253 (406)
Q Consensus 187 ~~I~~~a~~~----I~~g~~ILT~g~S~tV~~~L~~A~~~--~~~f~ViV~Es------rP~~eG~~~a~~L~~~-GI~v 253 (406)
+.|++.|+++ |.+|++|. +++++|+..+.+..... .++.+|+-+.+ .|......+++.|++. |+++
T Consensus 93 ~~ia~~AA~~l~~~i~~~~~ig-l~~GsT~~~~~~~L~~~~~~~~~~vv~l~ggl~~~~~~~~~~~~i~~~la~~~~~~~ 171 (315)
T 2w48_A 93 SAMGQHGALLVDRLLEPGDIIG-FSWGRAVRSLVENLPQRSQSRQVICVPIIGGPSGKLESRYHVNTLTYGAAARLKAES 171 (315)
T ss_dssp HHHHHHHHHHHHHHCCTTCEEE-ECCSHHHHHHHTTSCCCSSCCCCEEEESBCBCTTSSCGGGCHHHHHHHHHHHTTCEE
T ss_pred HHHHHHHHHHHHHhCCCCCEEE-ECChHHHHHHHHhhccccCCCCcEEEEcCCCCCCCCccccCHHHHHHHHHHHHCCce
Confidence 4566666665 88888765 57888988888776522 25677777643 2333345778888865 7766
Q ss_pred EEE--cc----hHH-HHHh------------hcCCEEEEcce
Q 045642 254 IVI--TD----SAV-FAMI------------SRVNMVIVGVH 276 (406)
Q Consensus 254 t~I--~D----sav-~~~m------------~~vd~VllGAd 276 (406)
..+ |+ ... -.++ .++|+.|+|.-
T Consensus 172 ~~l~~P~~~~~~~~~~~l~~~~~~~~~l~~~~~~DiailGIG 213 (315)
T 2w48_A 172 HLADFPALLDNPLIRNGIMQSQHFKTISSYWDSLDVALVGIG 213 (315)
T ss_dssp CCCCSBSBCSSHHHHHHHHHSHHHHHHHHHHTTCSEEEECCB
T ss_pred eEeeCCcccCCHHHHHHHHhChHHHHHHHHHhcCCEEEEccC
Confidence 433 22 112 1122 37999999986
No 68
>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2
Probab=67.62 E-value=11 Score=34.74 Aligned_cols=99 Identities=15% Similarity=0.194 Sum_probs=58.4
Q ss_pred CcEEEeccChHHHHHHHHH-HHHcCCceEEEEecCCCCc----chHHHHHHHHhCCCceEEE--cc-hHHHHHhhcCCEE
Q 045642 200 NEVILTLGHSKFVKEFLCA-AKEKKRSFEVFIADGAPKF----EGHILAKELDKKGLKAIVI--TD-SAVFAMISRVNMV 271 (406)
Q Consensus 200 g~~ILT~g~S~tV~~~L~~-A~~~~~~f~ViV~EsrP~~----eG~~~a~~L~~~GI~vt~I--~D-sav~~~m~~vd~V 271 (406)
..+||+.|.++.+=..+.. ..++| ++|+++.-.+.. +-....+.|...|+.+... .| .++..+++.+|.|
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~g--~~V~~l~R~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d~~~l~~~~~~~d~v 81 (308)
T 1qyc_A 4 RSRILLIGATGYIGRHVAKASLDLG--HPTFLLVRESTASSNSEKAQLLESFKASGANIVHGSIDDHASLVEAVKNVDVV 81 (308)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHTT--CCEEEECCCCCTTTTHHHHHHHHHHHTTTCEEECCCTTCHHHHHHHHHTCSEE
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhCC--CCEEEEECCcccccCHHHHHHHHHHHhCCCEEEEeccCCHHHHHHHHcCCCEE
Confidence 3568888876655444433 33334 567776544432 1123345566677765432 22 3556667766655
Q ss_pred EEcceeEeeCCCcccccchHHHHHHHhhCC-CceEEe
Q 045642 272 IVGVHAVMANGGVIAPAGLHVLALAAKKHD-VPFVVV 307 (406)
Q Consensus 272 llGAdav~~nG~vvnk~GT~~lAl~Ak~~~-vPv~V~ 307 (406)
|. +.+..+-.|+..++-+|+..+ ++-+|.
T Consensus 82 i~-------~a~~~~~~~~~~l~~aa~~~g~v~~~v~ 111 (308)
T 1qyc_A 82 IS-------TVGSLQIESQVNIIKAIKEVGTVKRFFP 111 (308)
T ss_dssp EE-------CCCGGGSGGGHHHHHHHHHHCCCSEEEC
T ss_pred EE-------CCcchhhhhHHHHHHHHHhcCCCceEee
Confidence 54 444445678889999999988 887774
No 69
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=67.57 E-value=4.2 Score=37.19 Aligned_cols=92 Identities=12% Similarity=0.134 Sum_probs=55.8
Q ss_pred cCcEEEeccChHHHHHHHHHHHHcCCceEEEEecCCCCcchHHHHHHHHhCCCceEEEcchHHHHHhhcCCEEEEcceeE
Q 045642 199 QNEVILTLGHSKFVKEFLCAAKEKKRSFEVFIADGAPKFEGHILAKELDKKGLKAIVITDSAVFAMISRVNMVIVGVHAV 278 (406)
Q Consensus 199 ~g~~ILT~g~S~tV~~~L~~A~~~~~~f~ViV~EsrP~~eG~~~a~~L~~~GI~vt~I~Dsav~~~m~~vd~VllGAdav 278 (406)
.|..||+.|...+..+-++...+.|.. |+|+...+..+ .+.|.+.| .++++...--...+..+|.||..++.
T Consensus 30 ~gk~VLVVGgG~va~~ka~~Ll~~GA~--VtVvap~~~~~----l~~l~~~~-~i~~i~~~~~~~dL~~adLVIaAT~d- 101 (223)
T 3dfz_A 30 KGRSVLVVGGGTIATRRIKGFLQEGAA--ITVVAPTVSAE----INEWEAKG-QLRVKRKKVGEEDLLNVFFIVVATND- 101 (223)
T ss_dssp TTCCEEEECCSHHHHHHHHHHGGGCCC--EEEECSSCCHH----HHHHHHTT-SCEEECSCCCGGGSSSCSEEEECCCC-
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCE--EEEECCCCCHH----HHHHHHcC-CcEEEECCCCHhHhCCCCEEEECCCC-
Confidence 577899999999888888888766754 44554333222 34455444 34455332222335667777765432
Q ss_pred eeCCCcccccchHHHHHHHhhCCCceEEe
Q 045642 279 MANGGVIAPAGLHVLALAAKKHDVPFVVV 307 (406)
Q Consensus 279 ~~nG~vvnk~GT~~lAl~Ak~~~vPv~V~ 307 (406)
.-+ ...++..|+ .++||-++
T Consensus 102 ----~~~----N~~I~~~ak-~gi~VNvv 121 (223)
T 3dfz_A 102 ----QAV----NKFVKQHIK-NDQLVNMA 121 (223)
T ss_dssp ----THH----HHHHHHHSC-TTCEEEC-
T ss_pred ----HHH----HHHHHHHHh-CCCEEEEe
Confidence 222 245777788 99998775
No 70
>3qhx_A Cystathionine gamma-synthase METB (CGS); structural genomics, seattle structural genomics center for infectious disease, ssgcid, CGS_LIKE; HET: LLP EPE; 1.65A {Mycobacterium ulcerans} SCOP: c.67.1.0 PDB: 3qi6_A*
Probab=67.34 E-value=22 Score=34.32 Aligned_cols=99 Identities=16% Similarity=0.012 Sum_probs=56.1
Q ss_pred CcEEEeccChHHHHHHHHHHHHcCCceEEEEecCCCCcchH-HHH-HHHHhCCCceEEEcch---HHHHHhh-cCCEEEE
Q 045642 200 NEVILTLGHSKFVKEFLCAAKEKKRSFEVFIADGAPKFEGH-ILA-KELDKKGLKAIVITDS---AVFAMIS-RVNMVIV 273 (406)
Q Consensus 200 g~~ILT~g~S~tV~~~L~~A~~~~~~f~ViV~EsrP~~eG~-~~a-~~L~~~GI~vt~I~Ds---av~~~m~-~vd~Vll 273 (406)
.+.++|-|.+..+...|..+.+.| -+|++. .|.+.|. ... ..+...|+.+++++-. .+...+. +...|++
T Consensus 82 ~~~~~~~sGt~A~~~al~~~~~~g--d~Vi~~--~~~y~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~i~~~~~~v~~ 157 (392)
T 3qhx_A 82 AFGRAFSSGMAAADCALRAMLRPG--DHVVIP--DDAYGGTFRLIDKVFTGWNVEYTPVALADLDAVRAAIRPTTRLIWV 157 (392)
T ss_dssp SEEEEESSHHHHHHHHHHHHCCTT--CEEEEE--TTCCHHHHHHHHHTGGGGTCEEEEECTTCHHHHHHHCCTTEEEEEE
T ss_pred CcEEEECCHHHHHHHHHHHHhCCC--CEEEEe--CCCcchHHHHHHHHHHhcCcEEEEeCCCCHHHHHHhhCCCCeEEEE
Confidence 357777777777776776664333 355553 5666663 333 4456789999998632 3333343 2333332
Q ss_pred cceeEeeCCCcccccchHHHHHHHhhCCCceEE
Q 045642 274 GVHAVMANGGVIAPAGLHVLALAAKKHDVPFVV 306 (406)
Q Consensus 274 GAdav~~nG~vvnk~GT~~lAl~Ak~~~vPv~V 306 (406)
+.+..-.+.+.. -..++-+|+++++++++
T Consensus 158 --~~~~nptG~~~~--l~~i~~la~~~g~~li~ 186 (392)
T 3qhx_A 158 --ETPTNPLLSIAD--IAGIAQLGADSSAKVLV 186 (392)
T ss_dssp --ESSCTTTCCCCC--HHHHHHHHHHHTCEEEE
T ss_pred --ECCCCCCcEEec--HHHHHHHHHHcCCEEEE
Confidence 222222222222 35678889999998887
No 71
>3dlo_A Universal stress protein; unknown function, structural genomics, PSI-2, protein struct initiative, midwest center for structural genomics; HET: MSE; 1.97A {Archaeoglobus fulgidus} PDB: 3qtb_A*
Probab=66.98 E-value=52 Score=27.06 Aligned_cols=102 Identities=13% Similarity=0.174 Sum_probs=58.1
Q ss_pred EEEeccC-hHHHHHHHHHHHH----cCCceEEE-EecCCCCc------ch----HHHHHHHHhCCCceEE---Ecc----
Q 045642 202 VILTLGH-SKFVKEFLCAAKE----KKRSFEVF-IADGAPKF------EG----HILAKELDKKGLKAIV---ITD---- 258 (406)
Q Consensus 202 ~ILT~g~-S~tV~~~L~~A~~----~~~~f~Vi-V~EsrP~~------eG----~~~a~~L~~~GI~vt~---I~D---- 258 (406)
+++-+.. |..-.+.|..|.+ .+..+.++ |.+..+.. ++ ..+.+.+.+.|+++.. +..
T Consensus 27 ILv~vD~~s~~s~~al~~A~~la~~~~a~l~llhV~~~~~~~~~~~~~~~~~~l~~~~~~~~~~g~~~~~~~~v~~G~~~ 106 (155)
T 3dlo_A 27 IVVAVDKKSDRAERVLRFAAEEARLRGVPVYVVHSLPGGGRTKDEDIIEAKETLSWAVSIIRKEGAEGEEHLLVRGKEPP 106 (155)
T ss_dssp EEEECCSSSHHHHHHHHHHHHHHHHHTCCEEEEEEECCSTTSCHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEESSSCHH
T ss_pred EEEEECCCCHHHHHHHHHHHHHHHhcCCEEEEEEEEcCCCcccHHHHHHHHHHHHHHHHHHHhcCCCceEEEEecCCCHH
Confidence 3444677 7766666655543 35566655 44432211 11 1234556678988764 322
Q ss_pred hHHHHHhh--cCCEEEEcceeEeeCCCccc-ccchHHHHHHHhhCCCceEEe
Q 045642 259 SAVFAMIS--RVNMVIVGVHAVMANGGVIA-PAGLHVLALAAKKHDVPFVVV 307 (406)
Q Consensus 259 sav~~~m~--~vd~VllGAdav~~nG~vvn-k~GT~~lAl~Ak~~~vPv~V~ 307 (406)
.++..+.. ++|.|++|+..- |++-. -.|+..-. +.++..+||+|+
T Consensus 107 ~~I~~~a~~~~~DLIV~G~~g~---~~~~~~~lGSv~~~-vl~~a~~PVLvV 154 (155)
T 3dlo_A 107 DDIVDFADEVDAIAIVIGIRKR---SPTGKLIFGSVARD-VILKANKPVICI 154 (155)
T ss_dssp HHHHHHHHHTTCSEEEEECCEE---CTTSCEECCHHHHH-HHHHCSSCEEEE
T ss_pred HHHHHHHHHcCCCEEEECCCCC---CCCCCEEeccHHHH-HHHhCCCCEEEe
Confidence 23333344 699999999873 33333 35765444 456778999986
No 72
>2z61_A Probable aspartate aminotransferase 2; amino acid aminotransferase, kynurenine aminotransferase, MJ0684, cytoplasm; HET: LLP; 2.20A {Methanococcus jannaschii}
Probab=66.80 E-value=41 Score=31.50 Aligned_cols=98 Identities=17% Similarity=0.107 Sum_probs=56.0
Q ss_pred ccCcEEEeccChHHHHHHHHHHHHcCCceEEEEecCCCCcchHHHHHHHHhCCCceEEEc-ch-HHHHHhh-cCCEEEEc
Q 045642 198 HQNEVILTLGHSKFVKEFLCAAKEKKRSFEVFIADGAPKFEGHILAKELDKKGLKAIVIT-DS-AVFAMIS-RVNMVIVG 274 (406)
Q Consensus 198 ~~g~~ILT~g~S~tV~~~L~~A~~~~~~f~ViV~EsrP~~eG~~~a~~L~~~GI~vt~I~-Ds-av~~~m~-~vd~VllG 274 (406)
....+++|.|.+..+..++..+.+.| -+|++. .|.+.|... .+...|.++..++ |- .+-..+. ++..|++
T Consensus 88 ~~~~v~~~~g~~~a~~~~~~~~~~~g--d~vl~~--~p~~~~~~~--~~~~~g~~~~~v~~d~~~l~~~l~~~~~~v~~- 160 (370)
T 2z61_A 88 IPDNIIITGGSSLGLFFALSSIIDDG--DEVLIQ--NPCYPCYKN--FIRFLGAKPVFCDFTVESLEEALSDKTKAIII- 160 (370)
T ss_dssp CGGGEEEESSHHHHHHHHHHHHCCTT--CEEEEE--SSCCTHHHH--HHHHTTCEEEEECSSHHHHHHHCCSSEEEEEE-
T ss_pred ChhhEEECCChHHHHHHHHHHhcCCC--CEEEEe--CCCchhHHH--HHHHcCCEEEEeCCCHHHHHHhcccCceEEEE-
Confidence 34567888887777777777664333 355555 366666433 2455788888875 32 2223332 3333443
Q ss_pred ceeEeeCCCcccccchHHHHHHHhhCCCceEE
Q 045642 275 VHAVMANGGVIAPAGLHVLALAAKKHDVPFVV 306 (406)
Q Consensus 275 Adav~~nG~vvnk~GT~~lAl~Ak~~~vPv~V 306 (406)
..---+.|.+...- ++-+|+++++++++
T Consensus 161 ~~p~nptG~~~~~~----l~~~~~~~~~~li~ 188 (370)
T 2z61_A 161 NSPSNPLGEVIDRE----IYEFAYENIPYIIS 188 (370)
T ss_dssp ESSCTTTCCCCCHH----HHHHHHHHCSEEEE
T ss_pred cCCCCCcCcccCHH----HHHHHHHcCCEEEE
Confidence 22111235555443 77788889988776
No 73
>2z08_A Universal stress protein family; uncharacterized conserved protein, structural genomics, unknown function, NPPSFA; HET: ATP; 1.55A {Thermus thermophilus} SCOP: c.26.2.4 PDB: 1wjg_A* 2z09_A* 2z3v_A
Probab=66.65 E-value=45 Score=26.41 Aligned_cols=37 Identities=14% Similarity=0.354 Sum_probs=24.9
Q ss_pred cCCEEEEcceeEeeCCCccc-ccchHHHHHHHhhCCCceEEe
Q 045642 267 RVNMVIVGVHAVMANGGVIA-PAGLHVLALAAKKHDVPFVVV 307 (406)
Q Consensus 267 ~vd~VllGAdav~~nG~vvn-k~GT~~lAl~Ak~~~vPv~V~ 307 (406)
++|.+++|++. .|++-. -.|+..-.+ .++..+||+|+
T Consensus 99 ~~dliV~G~~~---~~~~~~~~~Gs~~~~v-l~~~~~pVlvv 136 (137)
T 2z08_A 99 KADLIVMGTRG---LGALGSLFLGSQSQRV-VAEAPCPVLLV 136 (137)
T ss_dssp TCSEEEEESSC---TTCCSCSSSCHHHHHH-HHHCSSCEEEE
T ss_pred CCCEEEECCCC---CchhhhhhhccHHHHH-HhcCCCCEEEe
Confidence 69999999975 233332 357655444 45578999986
No 74
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=66.57 E-value=27 Score=28.21 Aligned_cols=90 Identities=11% Similarity=0.123 Sum_probs=52.7
Q ss_pred CcEEEeccChHHHHHHHHHHHHcCCceEEEEecCCCCcchHHHHHHHHhCCCceEEEcchHHHHH-----hhcCCEEEEc
Q 045642 200 NEVILTLGHSKFVKEFLCAAKEKKRSFEVFIADGAPKFEGHILAKELDKKGLKAIVITDSAVFAM-----ISRVNMVIVG 274 (406)
Q Consensus 200 g~~ILT~g~S~tV~~~L~~A~~~~~~f~ViV~EsrP~~eG~~~a~~L~~~GI~vt~I~Dsav~~~-----m~~vd~VllG 274 (406)
+..|+..|+...=..+.+.+.+.| ++|++++..|. -++.+.+.|+.+.. .|..-... +.++|.|++.
T Consensus 6 ~~~v~I~G~G~iG~~la~~L~~~g--~~V~~id~~~~-----~~~~~~~~~~~~~~-gd~~~~~~l~~~~~~~~d~vi~~ 77 (141)
T 3llv_A 6 RYEYIVIGSEAAGVGLVRELTAAG--KKVLAVDKSKE-----KIELLEDEGFDAVI-ADPTDESFYRSLDLEGVSAVLIT 77 (141)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTT--CCEEEEESCHH-----HHHHHHHTTCEEEE-CCTTCHHHHHHSCCTTCSEEEEC
T ss_pred CCEEEEECCCHHHHHHHHHHHHCC--CeEEEEECCHH-----HHHHHHHCCCcEEE-CCCCCHHHHHhCCcccCCEEEEe
Confidence 456777888665455555555444 57788887642 35566677876544 34322222 2456777765
Q ss_pred ceeEeeCCCcccccchHHHHHHHhhCCCceEE
Q 045642 275 VHAVMANGGVIAPAGLHVLALAAKKHDVPFVV 306 (406)
Q Consensus 275 Adav~~nG~vvnk~GT~~lAl~Ak~~~vPv~V 306 (406)
.. +......++..||..+++.++
T Consensus 78 ~~---------~~~~n~~~~~~a~~~~~~~ii 100 (141)
T 3llv_A 78 GS---------DDEFNLKILKALRSVSDVYAI 100 (141)
T ss_dssp CS---------CHHHHHHHHHHHHHHCCCCEE
T ss_pred cC---------CHHHHHHHHHHHHHhCCceEE
Confidence 43 233456778888887754443
No 75
>1vp4_A Aminotransferase, putative; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE PLP; 1.82A {Thermotoga maritima} SCOP: c.67.1.1
Probab=66.52 E-value=49 Score=31.86 Aligned_cols=136 Identities=15% Similarity=0.153 Sum_probs=69.5
Q ss_pred HHHHHHHHHHHHHHH-------H--HHHHHHHHHHHHHHHh-----cccCcEEEeccChHHHHHHHHHHHHcCCceEEEE
Q 045642 165 KKLKSELIKAVNELI-------E--DINTCREGIAEQAMEL-----IHQNEVILTLGHSKFVKEFLCAAKEKKRSFEVFI 230 (406)
Q Consensus 165 ~~~k~~l~~~i~~~~-------~--e~~~~~~~I~~~a~~~-----I~~g~~ILT~g~S~tV~~~L~~A~~~~~~f~ViV 230 (406)
+++++.+.+.++... . .....++.+++...+. +....+++|.|.+..+..++....+.| -+|++
T Consensus 61 ~~v~~a~~~~~~~~~~~~~~y~~~~g~~~lr~~la~~l~~~~g~~~~~~~~v~~t~G~~~al~~~~~~l~~~g--d~Vl~ 138 (425)
T 1vp4_A 61 KELAEIAKEIIEKEYHYTLQYSTTEGDPVLKQQILKLLERMYGITGLDEDNLIFTVGSQQALDLIGKLFLDDE--SYCVL 138 (425)
T ss_dssp HHHHHHHHHHHHHSHHHHTSCCCTTCCHHHHHHHHHHHHHHHCCCSCCGGGEEEEEHHHHHHHHHHHHHCCTT--CEEEE
T ss_pred HHHHHHHHHHHhhcchhhcCCCCCCCCHHHHHHHHHHHHhccCCCCCCcccEEEeccHHHHHHHHHHHhCCCC--CEEEE
Confidence 455666665554321 0 1234556666655433 334567888887777776666654333 35565
Q ss_pred ecCCCCcchHHHHHHHHhCCCceEEEc------c-hHHHHHhh---------cCCEEEEcceeEeeCCCcccccchHHHH
Q 045642 231 ADGAPKFEGHILAKELDKKGLKAIVIT------D-SAVFAMIS---------RVNMVIVGVHAVMANGGVIAPAGLHVLA 294 (406)
Q Consensus 231 ~EsrP~~eG~~~a~~L~~~GI~vt~I~------D-sav~~~m~---------~vd~VllGAdav~~nG~vvnk~GT~~lA 294 (406)
. .|.+.|.. ..+...|.++..++ | .++-..+. ++..|++-...--+.|.+...-=-..++
T Consensus 139 ~--~p~y~~~~--~~~~~~g~~~~~v~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~v~~~~~~~nptG~~~~~~~l~~l~ 214 (425)
T 1vp4_A 139 D--DPAYLGAI--NAFRQYLANFVVVPLEDDGMDLNVLERKLSEFDKNGKIKQVKFIYVVSNFHNPAGVTTSLEKRKALV 214 (425)
T ss_dssp E--ESCCHHHH--HHHHTTTCEEEEEEEETTEECHHHHHHHHHHHHHTTCGGGEEEEEEECSSCTTTCCCCCHHHHHHHH
T ss_pred e--CCCcHHHH--HHHHHcCCEEEEeccCCCCCCHHHHHHHHHhhhhcccCCCceEEEECCCCCCCCCCcCCHHHHHHHH
Confidence 4 36666643 23445788777664 2 12333333 3333322111111123333221123577
Q ss_pred HHHhhCCCceEE
Q 045642 295 LAAKKHDVPFVV 306 (406)
Q Consensus 295 l~Ak~~~vPv~V 306 (406)
-.|+++++++++
T Consensus 215 ~~~~~~~~~li~ 226 (425)
T 1vp4_A 215 EIAEKYDLFIVE 226 (425)
T ss_dssp HHHHHTTCEEEE
T ss_pred HHHHHcCCEEEE
Confidence 788999998876
No 76
>1svv_A Threonine aldolase; structural genomics, structural genomics of pathogenic proto SGPP, protein structure initiative, PSI; 2.10A {Leishmania major} SCOP: c.67.1.1
Probab=66.49 E-value=18 Score=33.62 Aligned_cols=102 Identities=11% Similarity=0.086 Sum_probs=57.0
Q ss_pred cCcEEEeccChHHHHHHHHHHHHcCCceEEEEecCCCCcchHHHHHHHHhCCCceEEEcch-------HHHHHhhc----
Q 045642 199 QNEVILTLGHSKFVKEFLCAAKEKKRSFEVFIADGAPKFEGHILAKELDKKGLKAIVITDS-------AVFAMISR---- 267 (406)
Q Consensus 199 ~g~~ILT~g~S~tV~~~L~~A~~~~~~f~ViV~EsrP~~eG~~~a~~L~~~GI~vt~I~Ds-------av~~~m~~---- 267 (406)
...+++|.|.+..+..++..+.+.| -+|++. .|.+.+...+..+...|+++..++.. .+-..+.+
T Consensus 66 ~~~v~~~~g~t~a~~~~~~~~~~~g--d~vl~~--~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~d~~~l~~~l~~~~~~ 141 (359)
T 1svv_A 66 DADVHFISGGTQTNLIACSLALRPW--EAVIAT--QLGHISTHETGAIEATGHKVVTAPCPDGKLRVADIESALHENRSE 141 (359)
T ss_dssp TSEEEEESCHHHHHHHHHHHHCCTT--EEEEEE--TTSHHHHSSTTHHHHTTCCEEEECCTTSCCCHHHHHHHHHHSCST
T ss_pred CccEEEeCCchHHHHHHHHHHhCCC--CEEEEc--ccchHHHHHHHHHhcCCCeeEEEeCCCCeecHHHHHHHHHHHHhc
Confidence 3457788888888777777775333 355554 45555543222356679988888632 33333433
Q ss_pred ----CCEEEEcceeEeeCCCcccccchHHHHHHHhhCCCceEE
Q 045642 268 ----VNMVIVGVHAVMANGGVIAPAGLHVLALAAKKHDVPFVV 306 (406)
Q Consensus 268 ----vd~VllGAdav~~nG~vvnk~GT~~lAl~Ak~~~vPv~V 306 (406)
+..|++- . ....|.+...-=-..++-+|+++++++++
T Consensus 142 ~~~~~~~v~~~-~-~~ptG~~~~~~~l~~i~~~~~~~~~~li~ 182 (359)
T 1svv_A 142 HMVIPKLVYIS-N-TTEVGTQYTKQELEDISASCKEHGLYLFL 182 (359)
T ss_dssp TSCEEEEEEEE-S-SCTTSCCCCHHHHHHHHHHHHHHTCEEEE
T ss_pred cCCCceEEEEE-c-CCCCceecCHHHHHHHHHHHHHhCCEEEE
Confidence 3334442 2 22224443321123466788899998876
No 77
>2h1q_A Hypothetical protein; ZP_00559375.1, structural genomics, PSI-2, protein structure initiative; 2.01A {Desulfitobacterium hafniense dcb-2} PDB: 3l5o_A
Probab=66.40 E-value=8.5 Score=36.26 Aligned_cols=89 Identities=16% Similarity=0.216 Sum_probs=62.9
Q ss_pred ccCcEEEeccChHHHHHHHHHHHHcCCceEEEEecCCCCcchHHHHHHHHhCCCceEEEcchHHHHHhhcCCEEEEccee
Q 045642 198 HQNEVILTLGHSKFVKEFLCAAKEKKRSFEVFIADGAPKFEGHILAKELDKKGLKAIVITDSAVFAMISRVNMVIVGVHA 277 (406)
Q Consensus 198 ~~g~~ILT~g~S~tV~~~L~~A~~~~~~f~ViV~EsrP~~eG~~~a~~L~~~GI~vt~I~Dsav~~~m~~vd~VllGAda 277 (406)
..|..|..+|+-..+.+.+. +.++|+|+|-.|. + |. ++|.+.-+++++||.|++-.-+
T Consensus 139 ~~g~kV~vIG~~P~i~~~l~------~~~~v~V~d~~p~-~-----------g~----~p~~~~e~ll~~aD~viiTGsT 196 (270)
T 2h1q_A 139 VKGKKVGVVGHFPHLESLLE------PICDLSILEWSPE-E-----------GD----YPLPASEFILPECDYVYITCAS 196 (270)
T ss_dssp TTTSEEEEESCCTTHHHHHT------TTSEEEEEESSCC-T-----------TC----EEGGGHHHHGGGCSEEEEETHH
T ss_pred cCCCEEEEECCCHHHHHHHh------CCCCEEEEECCCC-C-----------CC----CChHHHHHHhhcCCEEEEEeee
Confidence 36788999999876666542 2478999999997 2 32 4888888999999999997655
Q ss_pred EeeCCCcccccchHHHHHHHhhCCCceEEecCCcccccc
Q 045642 278 VMANGGVIAPAGLHVLALAAKKHDVPFVVVASTHELCSL 316 (406)
Q Consensus 278 v~~nG~vvnk~GT~~lAl~Ak~~~vPv~V~aes~K~~~~ 316 (406)
+. |++=-..+.++ + .+.+++++.+|--++|.
T Consensus 197 lv------N~Ti~~lL~~~-~-~a~~vvl~GPS~p~~P~ 227 (270)
T 2h1q_A 197 VV------DKTLPRLLELS-R-NARRITLVGPGTPLAPV 227 (270)
T ss_dssp HH------HTCHHHHHHHT-T-TSSEEEEESTTCCCCGG
T ss_pred ee------cCCHHHHHHhC-c-cCCeEEEEecChhhhHH
Confidence 33 33333333333 3 56799999999777663
No 78
>3cdk_A Succinyl-COA:3-ketoacid-coenzyme A transferase subunit A; CO-expressed complex, hetero-tetramer, structural genomics, PSI-2; 2.59A {Bacillus subtilis}
Probab=65.86 E-value=32 Score=31.55 Aligned_cols=44 Identities=23% Similarity=0.277 Sum_probs=31.3
Q ss_pred cCCEEEEcceeEeeCCCcccc--cc--hHHHHHHHhhCCCceEEecCCcccccc
Q 045642 267 RVNMVIVGVHAVMANGGVIAP--AG--LHVLALAAKKHDVPFVVVASTHELCSL 316 (406)
Q Consensus 267 ~vd~VllGAdav~~nG~vvnk--~G--T~~lAl~Ak~~~vPv~V~aes~K~~~~ 316 (406)
++|..|+-|...-.+|.+.-. .+ ...+|.+|| .|+++.-++.|.
T Consensus 151 ~~DVAlI~a~~aD~~Gn~~~~~~~~~~~~~~a~aAk------~VIveVn~~vp~ 198 (241)
T 3cdk_A 151 TGDVAIVKAWKADTMGNLIFRKTARNFNPIAAMAGK------ITIAEAEEIVEA 198 (241)
T ss_dssp CEEEEEEEEEEEETTCCEECCGGGCTTHHHHHHHEE------EEEEEEEEEECT
T ss_pred CCcEEEEEeccCCCCCeEEEecCchhhHHHHHHhCC------EEEEEEeCCCCc
Confidence 589999999999999987754 22 355666666 566666566554
No 79
>3ezs_A Aminotransferase ASPB; NP_207418.1, structural genomics, JOI for structural genomics, JCSG; HET: MSE; 2.19A {Helicobacter pylori 26695} SCOP: c.67.1.0
Probab=65.77 E-value=44 Score=31.27 Aligned_cols=104 Identities=17% Similarity=0.164 Sum_probs=60.1
Q ss_pred ccCcEEEeccChHHHHHHHHHHHHcCCceEEEEecCCCCcchHHHHHHHHhCCCceEEEcch-------HH-HHHhhcCC
Q 045642 198 HQNEVILTLGHSKFVKEFLCAAKEKKRSFEVFIADGAPKFEGHILAKELDKKGLKAIVITDS-------AV-FAMISRVN 269 (406)
Q Consensus 198 ~~g~~ILT~g~S~tV~~~L~~A~~~~~~f~ViV~EsrP~~eG~~~a~~L~~~GI~vt~I~Ds-------av-~~~m~~vd 269 (406)
....+++|.|.+..+..++..+.+.+..-+|++. .|.+.+... .+...|.++..++-. .+ ..+-++..
T Consensus 81 ~~~~i~~t~g~~~al~~~~~~~~~~~~gd~vl~~--~p~~~~~~~--~~~~~g~~~~~~~~~~~~~~~~~l~~~~~~~~~ 156 (376)
T 3ezs_A 81 KENELISTLGSREVLFNFPSFVLFDYQNPTIAYP--NPFYQIYEG--AAKFIKAKSLLMPLTKENDFTPSLNEKELQEVD 156 (376)
T ss_dssp CGGGEEEESSSHHHHHHHHHHHTTTCSSCEEEEE--ESCCTHHHH--HHHHTTCEEEEEECCGGGTSCCCCCHHHHHHCS
T ss_pred CHHHEEECcCcHHHHHHHHHHHcCCCCCCEEEEe--cCCcHhHHH--HHHHcCCEEEEcccCCCCCcchhHHhhhccCCC
Confidence 3456888988888888777777543103356655 466666432 345678887777521 11 22234566
Q ss_pred EEEEcceeEeeCCCcccccchHHHHHHHhhCCCceEE
Q 045642 270 MVIVGVHAVMANGGVIAPAGLHVLALAAKKHDVPFVV 306 (406)
Q Consensus 270 ~VllGAdav~~nG~vvnk~GT~~lAl~Ak~~~vPv~V 306 (406)
.|++- .---+.|.+...---..++-.|+++++++++
T Consensus 157 ~v~~~-~p~nptG~~~~~~~l~~i~~~~~~~~~~li~ 192 (376)
T 3ezs_A 157 LVILN-SPNNPTGRTLSLEELISWVKLALKHDFILIN 192 (376)
T ss_dssp EEEEC-SSCTTTCCCCCHHHHHHHHHHHHHHTCEEEE
T ss_pred EEEEc-CCCCCcCCCCCHHHHHHHHHHHHHcCcEEEE
Confidence 66663 2222234444333334566678899998886
No 80
>1vjo_A Alanine--glyoxylate aminotransferase; 17130350, ALR1004, STR genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: PLP; 1.70A {Nostoc SP} SCOP: c.67.1.3
Probab=65.60 E-value=27 Score=33.02 Aligned_cols=98 Identities=13% Similarity=0.157 Sum_probs=56.9
Q ss_pred cEEEeccChHHHHHHHHHHHHcCCceEEEEecCCCCcchHHHHHHHHhCCCceEEEcc--------hHHHHHhh--cCCE
Q 045642 201 EVILTLGHSKFVKEFLCAAKEKKRSFEVFIADGAPKFEGHILAKELDKKGLKAIVITD--------SAVFAMIS--RVNM 270 (406)
Q Consensus 201 ~~ILT~g~S~tV~~~L~~A~~~~~~f~ViV~EsrP~~eG~~~a~~L~~~GI~vt~I~D--------sav~~~m~--~vd~ 270 (406)
.+++|.|.+..+..++..+.+.| -+|++. .|.+.|......+...|.++..++- ..+-..+. ++..
T Consensus 87 ~v~~t~g~t~al~~~~~~~~~~g--d~Vl~~--~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~~~~ 162 (393)
T 1vjo_A 87 TIAVSGTGTAAMEATIANAVEPG--DVVLIG--VAGYFGNRLVDMAGRYGADVRTISKPWGEVFSLEELRTALETHRPAI 162 (393)
T ss_dssp EEEESSCHHHHHHHHHHHHCCTT--CEEEEE--ESSHHHHHHHHHHHHTTCEEEEEECCTTCCCCHHHHHHHHHHHCCSE
T ss_pred EEEEeCchHHHHHHHHHhccCCC--CEEEEE--cCChhHHHHHHHHHHcCCceEEEecCCCCCCCHHHHHHHHhhCCceE
Confidence 47777777777777777765333 356655 3666664455556678988877751 23333333 4555
Q ss_pred EEEcceeEeeCCCcccccchHHHHHHHhhCCCceEE
Q 045642 271 VIVGVHAVMANGGVIAPAGLHVLALAAKKHDVPFVV 306 (406)
Q Consensus 271 VllGAdav~~nG~vvnk~GT~~lAl~Ak~~~vPv~V 306 (406)
|++. ..--..|.+.. . -.++-+|+++++++++
T Consensus 163 v~~~-~~~nptG~~~~-l--~~i~~l~~~~~~~li~ 194 (393)
T 1vjo_A 163 LALV-HAETSTGARQP-L--EGVGELCREFGTLLLV 194 (393)
T ss_dssp EEEE-SEETTTTEECC-C--TTHHHHHHHHTCEEEE
T ss_pred EEEe-ccCCCcceecc-H--HHHHHHHHHcCCEEEE
Confidence 5542 22233344432 2 3567778888988776
No 81
>1qgn_A Protein (cystathionine gamma-synthase); methionine biosynthesis, pyridoxal 5'-phosphate, gamma-famil; HET: PLP; 2.90A {Nicotiana tabacum} SCOP: c.67.1.3 PDB: 1i41_A* 1i48_A* 1i43_A*
Probab=65.31 E-value=42 Score=33.43 Aligned_cols=98 Identities=12% Similarity=0.089 Sum_probs=54.7
Q ss_pred cEEEeccChHHHHHHHHHHHHcCCceEEEEecCCCCcchH-HHHH-HHHhCCCceEEEcc---hHHHHHhhc-C-CEEEE
Q 045642 201 EVILTLGHSKFVKEFLCAAKEKKRSFEVFIADGAPKFEGH-ILAK-ELDKKGLKAIVITD---SAVFAMISR-V-NMVIV 273 (406)
Q Consensus 201 ~~ILT~g~S~tV~~~L~~A~~~~~~f~ViV~EsrP~~eG~-~~a~-~L~~~GI~vt~I~D---sav~~~m~~-v-d~Vll 273 (406)
+.|++.+.+..+..++....+.| -+|++.+ |.+.|. .+.+ .+...|+++++++- ..+...+.. . ..|++
T Consensus 131 ~~v~~~sG~~Ai~~al~~l~~~G--d~Vi~~~--~~y~~~~~~~~~~~~~~G~~v~~v~~~d~~~l~~ai~~~tv~lV~l 206 (445)
T 1qgn_A 131 STLLMASGMCASTVMLLALVPAG--GHIVTTT--DCYRKTRIFIETILPKMGITATVIDPADVGALELALNQKKVNLFFT 206 (445)
T ss_dssp EEEEESCHHHHHHHHHHHHSCSS--CEEEEET--TSCHHHHHHHHHTGGGGTCEEEEECSSCHHHHHHHHHHSCEEEEEE
T ss_pred cEEEeCCHHHHHHHHHHHHhCCC--CEEEEcC--CCchhHHHHHHHHHHHcCCEEEEeCCCCHHHHHHHhccCCCCEEEE
Confidence 55666555555555555444333 3566655 777763 3323 46678999999863 234444443 3 33443
Q ss_pred cceeEeeCCCcccccchHHHHHHHhhCCCceEE
Q 045642 274 GVHAVMANGGVIAPAGLHVLALAAKKHDVPFVV 306 (406)
Q Consensus 274 GAdav~~nG~vvnk~GT~~lAl~Ak~~~vPv~V 306 (406)
+.+..-.+.+.. --.++-+|++++++|+|
T Consensus 207 --e~p~NptG~v~d--l~~I~~la~~~g~~liv 235 (445)
T 1qgn_A 207 --ESPTNPFLRCVD--IELVSKLCHEKGALVCI 235 (445)
T ss_dssp --ESSCTTTCCCCC--HHHHHHHHHHTTCEEEE
T ss_pred --eCCCCCCCcccC--HHHHHHHHHHcCCEEEE
Confidence 222222223333 24678889999998876
No 82
>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D
Probab=65.08 E-value=21 Score=32.38 Aligned_cols=102 Identities=11% Similarity=0.048 Sum_probs=61.4
Q ss_pred EEEeccChHHHHHHHHHHHHcC-CceEEEEecCCCCcchHHHHHHHHhCCCceEEE--cc-hHHHHHhhcCCEEEEccee
Q 045642 202 VILTLGHSKFVKEFLCAAKEKK-RSFEVFIADGAPKFEGHILAKELDKKGLKAIVI--TD-SAVFAMISRVNMVIVGVHA 277 (406)
Q Consensus 202 ~ILT~g~S~tV~~~L~~A~~~~-~~f~ViV~EsrP~~eG~~~a~~L~~~GI~vt~I--~D-sav~~~m~~vd~VllGAda 277 (406)
+||+.|.++.+=..|.....+. ..++|+++.-.|.. +..|...++.+... .| .++..++..+|.|+--|-.
T Consensus 2 ~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~-----~~~l~~~~~~~~~~D~~d~~~l~~~~~~~d~vi~~a~~ 76 (287)
T 2jl1_A 2 SIAVTGATGQLGGLVIQHLLKKVPASQIIAIVRNVEK-----ASTLADQGVEVRHGDYNQPESLQKAFAGVSKLLFISGP 76 (287)
T ss_dssp CEEETTTTSHHHHHHHHHHTTTSCGGGEEEEESCTTT-----THHHHHTTCEEEECCTTCHHHHHHHTTTCSEEEECCCC
T ss_pred eEEEEcCCchHHHHHHHHHHHhCCCCeEEEEEcCHHH-----HhHHhhcCCeEEEeccCCHHHHHHHHhcCCEEEEcCCC
Confidence 4788888877766665554221 25678877655432 12344556654332 22 3566677888888764431
Q ss_pred EeeCCCcccccchHHHHHHHhhCCCceEEecCC
Q 045642 278 VMANGGVIAPAGLHVLALAAKKHDVPFVVVAST 310 (406)
Q Consensus 278 v~~nG~vvnk~GT~~lAl~Ak~~~vPv~V~aes 310 (406)
- -+.-+|-.|+..+.-+|+..+++-+|...+
T Consensus 77 ~--~~~~~n~~~~~~l~~a~~~~~~~~~v~~Ss 107 (287)
T 2jl1_A 77 H--YDNTLLIVQHANVVKAARDAGVKHIAYTGY 107 (287)
T ss_dssp C--SCHHHHHHHHHHHHHHHHHTTCSEEEEEEE
T ss_pred C--cCchHHHHHHHHHHHHHHHcCCCEEEEECC
Confidence 1 111236779999999999999865655444
No 83
>4ffc_A 4-aminobutyrate aminotransferase (GABT); structural genomics, niaid, national institute of allergy AN infectious diseases; HET: LLP; 1.80A {Mycobacterium abscessus}
Probab=64.97 E-value=25 Score=34.75 Aligned_cols=139 Identities=17% Similarity=0.225 Sum_probs=73.7
Q ss_pred HHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHhcc---cCcEEEeccChHHHHHHHHHHHH-cCCceEEEEecCCC
Q 045642 165 KKLKSELIKAVNELIE-----DINTCREGIAEQAMELIH---QNEVILTLGHSKFVKEFLCAAKE-KKRSFEVFIADGAP 235 (406)
Q Consensus 165 ~~~k~~l~~~i~~~~~-----e~~~~~~~I~~~a~~~I~---~g~~ILT~g~S~tV~~~L~~A~~-~~~~f~ViV~EsrP 235 (406)
+++++.+.+.++.+.. -.......+++..+++.. ...+++|.|.|..++..|+.|.. .|+ -+|++. .|
T Consensus 83 p~v~~A~~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~~~~v~~~~sGseA~~~alk~a~~~~g~-~~ii~~--~~ 159 (453)
T 4ffc_A 83 PAVAAAIADQATHFTHTCFMVTPYEQYVQVAELLNALTPGDHDKRTALFNSGAEAVENAIKVARLATGR-PAVVAF--DN 159 (453)
T ss_dssp HHHHHHHHHHHHHCSCCTTTTSCCHHHHHHHHHHHHHSSCSSCEEEEEESSHHHHHHHHHHHHHHHHCC-CEEEEE--TT
T ss_pred HHHHHHHHHHHHhccccccCcCCCHHHHHHHHHHHHhCCCCCCcEEEEeCcHHHHHHHHHHHHHHhcCC-CEEEEE--cC
Confidence 5566666666655311 011222344444445553 23578888899999999988764 243 345554 34
Q ss_pred CcchH-HHHHHHHhC------CC-----ceEEEc------c-------hH-------HHHHhhcCCEEEEcceeEeeCCC
Q 045642 236 KFEGH-ILAKELDKK------GL-----KAIVIT------D-------SA-------VFAMISRVNMVIVGVHAVMANGG 283 (406)
Q Consensus 236 ~~eG~-~~a~~L~~~------GI-----~vt~I~------D-------sa-------v~~~m~~vd~VllGAdav~~nG~ 283 (406)
.+.|. ..+..+... +. .+..++ | .. +-..+..-+..++=.+-+..+||
T Consensus 160 ~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~i~~~~~aavi~ep~~~~gG 239 (453)
T 4ffc_A 160 AYHGRTNLTMALTAKSMPYKSQFGPFAPEVYRMPASYPLRDEPGLTGEEAARRAISRIETQIGAQSLAAIIIEPIQGEGG 239 (453)
T ss_dssp CCCCSSHHHHHHCCCCTTTTTTSCSCCSSEEEECCCCTTTSCTTCCHHHHHHHHHHHHHHHTCGGGEEEEEECSSBTTTT
T ss_pred ccCCcchHHHhhcCCCcccccCCCCCCCCcEEeCCCccccCccccchHHHHHHHHHHHHHhcCCCCEEEEEEcCCCCCCC
Confidence 45554 223333211 11 333333 2 11 11112222344444566888887
Q ss_pred cccc-cchH-HHHHHHhhCCCceEE
Q 045642 284 VIAP-AGLH-VLALAAKKHDVPFVV 306 (406)
Q Consensus 284 vvnk-~GT~-~lAl~Ak~~~vPv~V 306 (406)
++.. -+-. .++-+|++|++.+++
T Consensus 240 ~~~~~~~~l~~l~~l~~~~~~llI~ 264 (453)
T 4ffc_A 240 FIVPAPGFLATLTAWASENGVVFIA 264 (453)
T ss_dssp SBCCCTTHHHHHHHHHHHHTCEEEE
T ss_pred cccCCHHHHHHHHHHHHHcCCEEEE
Confidence 7753 3433 367789999998875
No 84
>1o1y_A Conserved hypothetical protein TM1158; flavodoxin-like fold, structural genomics, joint center for structural genomics, JCSG; 1.70A {Thermotoga maritima} SCOP: c.23.16.1
Probab=64.77 E-value=6.7 Score=35.88 Aligned_cols=90 Identities=9% Similarity=0.012 Sum_probs=52.7
Q ss_pred CceEEEEecCCCCcchHHHHHHHHhCCCceEEEcchH---HHHHhhcCCEEEEcceeEeeCCCc-cccc-chHHHHHHHh
Q 045642 224 RSFEVFIADGAPKFEGHILAKELDKKGLKAIVITDSA---VFAMISRVNMVIVGVHAVMANGGV-IAPA-GLHVLALAAK 298 (406)
Q Consensus 224 ~~f~ViV~EsrP~~eG~~~a~~L~~~GI~vt~I~Dsa---v~~~m~~vd~VllGAdav~~nG~v-vnk~-GT~~lAl~Ak 298 (406)
...+|.|++-.|...-..+.+.|.+.|++++++.-.. +...+.++|.+|++--..-..+.. .... +...+...|.
T Consensus 11 ~~~~~~~i~~~~~~~~~~i~~~l~~~G~~v~v~~~~~~~~~~~~l~~~Dglil~GG~~~~~~~~~~~~l~~~~~~i~~~~ 90 (239)
T 1o1y_A 11 HHVRVLAIRHVEIEDLGMMEDIFREKNWSFDYLDTPKGEKLERPLEEYSLVVLLGGYMGAYEEEKYPFLKYEFQLIEEIL 90 (239)
T ss_dssp CCCEEEEECSSTTSSCTHHHHHHHHTTCEEEEECGGGTCCCSSCGGGCSEEEECCCSCCTTCTTTCTHHHHHHHHHHHHH
T ss_pred ceeEEEEEECCCCCCchHHHHHHHhCCCcEEEeCCcCccccccchhcCCEEEECCCCccccCCccChhHHHHHHHHHHHH
Confidence 4678999998887665678899999999998765322 122355678777742111111110 0001 2223333344
Q ss_pred hCCCceEEecCCccc
Q 045642 299 KHDVPFVVVASTHEL 313 (406)
Q Consensus 299 ~~~vPv~V~aes~K~ 313 (406)
..++|++-+|--+-+
T Consensus 91 ~~~~PiLGIC~G~Ql 105 (239)
T 1o1y_A 91 KKEIPFLGICLGSQM 105 (239)
T ss_dssp HHTCCEEEETHHHHH
T ss_pred HCCCCEEEEchhHHH
Confidence 578999988854433
No 85
>3frk_A QDTB; aminotransferase, sugar-modification, natural porduct; HET: TQP; 2.15A {Thermoanaerobacteriumthermosaccharolyticum}
Probab=64.55 E-value=22 Score=33.53 Aligned_cols=103 Identities=17% Similarity=0.120 Sum_probs=55.1
Q ss_pred HHHhcccCcEEEeccChHHHHHHHHHHHHcCCceEEEEecCCCCcchHHHHHHHHhCCCceEEEcch---------HHHH
Q 045642 193 AMELIHQNEVILTLGHSKFVKEFLCAAKEKKRSFEVFIADGAPKFEGHILAKELDKKGLKAIVITDS---------AVFA 263 (406)
Q Consensus 193 a~~~I~~g~~ILT~g~S~tV~~~L~~A~~~~~~f~ViV~EsrP~~eG~~~a~~L~~~GI~vt~I~Ds---------av~~ 263 (406)
.++++.....|+|-|.+..+..+|..+. -++.-+|++. .|.+.+.. ..+...|.++..++-. .+..
T Consensus 45 la~~~~~~~~i~~~sgt~al~~~l~~l~-~~~gd~Vi~~--~~~~~~~~--~~~~~~g~~~~~~~~~~~~~~~d~~~l~~ 119 (373)
T 3frk_A 45 FADYCNVNYCIGCGNGLDALHLILKGYD-IGFGDEVIVP--SNTFIATA--LAVSYTGAKPIFVEPDIRTYNIDPSLIES 119 (373)
T ss_dssp HHHHHTSSEEEEESCHHHHHHHHHHHTT-CCTTCEEEEE--TTSCTHHH--HHHHHHSCEEEEECEETTTTEECGGGTGG
T ss_pred HHHHhCCCeEEEeCCHHHHHHHHHHHcC-CCCcCEEEEC--CCCcHHHH--HHHHHcCCEEEEEeccccccCcCHHHHHH
Confidence 3345555577888777777766666651 1223356654 45555533 3355668888777522 1112
Q ss_pred HhhcCCEEEEcceeEeeCCCcccccchHHHHHHHhhCCCceEE
Q 045642 264 MISRVNMVIVGVHAVMANGGVIAPAGLHVLALAAKKHDVPFVV 306 (406)
Q Consensus 264 ~m~~vd~VllGAdav~~nG~vvnk~GT~~lAl~Ak~~~vPv~V 306 (406)
.+..-.++|+ ..-..|.+. ---.++-+|++++++|++
T Consensus 120 ~l~~~~~~v~---~~n~~G~~~---~l~~i~~l~~~~~~~li~ 156 (373)
T 3frk_A 120 AITEKTKAII---AVHLYGQPA---DMDEIKRIAKKYNLKLIE 156 (373)
T ss_dssp GCCTTEEEEE---EECCTTCCC---CHHHHHHHHHHHTCEEEE
T ss_pred hcCCCCeEEE---EECCCcCcc---cHHHHHHHHHHcCCEEEE
Confidence 2222223343 111233321 124677788999998887
No 86
>3nyt_A Aminotransferase WBPE; PLP binding, nucleotide-sugar binding; HET: ULP; 1.30A {Pseudomonas aeruginosa} PDB: 3nys_A* 3nyu_A* 3nu8_A* 3nu7_A* 3nub_A*
Probab=64.48 E-value=57 Score=30.64 Aligned_cols=100 Identities=14% Similarity=0.132 Sum_probs=56.2
Q ss_pred HHHHhcccCcEEEeccChHHHHHHHHHHHHcCCceEEEEecCCCCcchHHHHHHHHhCCCceEEEcch---------HHH
Q 045642 192 QAMELIHQNEVILTLGHSKFVKEFLCAAKEKKRSFEVFIADGAPKFEGHILAKELDKKGLKAIVITDS---------AVF 262 (406)
Q Consensus 192 ~a~~~I~~g~~ILT~g~S~tV~~~L~~A~~~~~~f~ViV~EsrP~~eG~~~a~~L~~~GI~vt~I~Ds---------av~ 262 (406)
..++++.....++|-|.+..+...|..+. -++.-+|++.. |.+.+. ...+...|.++..+.-. .+-
T Consensus 43 ~la~~~~~~~~~~~~sGt~al~~al~~~~-~~~gd~Vi~~~--~~~~~~--~~~~~~~G~~~~~~~~~~~~~~~d~~~l~ 117 (367)
T 3nyt_A 43 RLADFVGAKYCISCANGTDALQIVQMALG-VGPGDEVITPG--FTYVAT--AETVALLGAKPVYVDIDPRTYNLDPQLLE 117 (367)
T ss_dssp HHHHHHTCSEEEEESCHHHHHHHHHHHTT-CCTTCEEEEES--SSCTHH--HHHHHHTTCEEEEECBCTTTCSBCGGGTG
T ss_pred HHHHHhCCCcEEEeCCHHHHHHHHHHHhC-CCCcCEEEECC--CccHHH--HHHHHHcCCEEEEEecCCccCCcCHHHHH
Confidence 33445555577888777777777776662 22334566653 455553 33355679888877522 111
Q ss_pred HHhhcCCEEEEcceeEeeCCCcccccch----HHHHHHHhhCCCceEE
Q 045642 263 AMISRVNMVIVGVHAVMANGGVIAPAGL----HVLALAAKKHDVPFVV 306 (406)
Q Consensus 263 ~~m~~vd~VllGAdav~~nG~vvnk~GT----~~lAl~Ak~~~vPv~V 306 (406)
..+..-.++|+ +.|..|+ ..++-+|+.++++|++
T Consensus 118 ~~i~~~~~~v~----------~~~~~G~~~~~~~i~~la~~~~~~li~ 155 (367)
T 3nyt_A 118 AAITPRTKAII----------PVSLYGQCADFDAINAIASKYGIPVIE 155 (367)
T ss_dssp GGCCTTEEEEC----------CBCGGGCCCCHHHHHHHHHHTTCCBEE
T ss_pred HhcCcCCcEEE----------eeCCccChhhHHHHHHHHHHcCCEEEE
Confidence 11211123333 2234453 4577889999999887
No 87
>2yv1_A Succinyl-COA ligase [ADP-forming] subunit alpha; COA-binding domain, structural genomics, NPPSFA; 1.70A {Methanocaldococcus jannaschii}
Probab=64.46 E-value=5.5 Score=37.82 Aligned_cols=106 Identities=14% Similarity=0.182 Sum_probs=67.4
Q ss_pred cCcEEEeccChHHHHHHHHHHHHcCCceEEEEecCCCCcchHHHHHHHHhCCCceEEEcchHHHHHhhcCCEEEEcceeE
Q 045642 199 QNEVILTLGHSKFVKEFLCAAKEKKRSFEVFIADGAPKFEGHILAKELDKKGLKAIVITDSAVFAMISRVNMVIVGVHAV 278 (406)
Q Consensus 199 ~g~~ILT~g~S~tV~~~L~~A~~~~~~f~ViV~EsrP~~eG~~~a~~L~~~GI~vt~I~Dsav~~~m~~vd~VllGAdav 278 (406)
+-|.++.+-....+...+..|.+.|.+.-|++++.-|..+-..+.+...+.|+ .++-.+.++.+-+...+.......+
T Consensus 70 ~~Dv~ii~vp~~~~~~~v~ea~~~Gi~~vVi~t~G~~~~~~~~l~~~A~~~gi--~viGPNc~Gii~~~~~~~~~~~~~~ 147 (294)
T 2yv1_A 70 DANASVIFVPAPFAKDAVFEAIDAGIELIVVITEHIPVHDTMEFVNYAEDVGV--KIIGPNTPGIASPKVGKLGIIPMEV 147 (294)
T ss_dssp CCCEEEECCCHHHHHHHHHHHHHTTCSEEEECCSCCCHHHHHHHHHHHHHHTC--EEECSSCCEEEETTTEEEECCCGGG
T ss_pred CCCEEEEccCHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHcCC--EEEcCCCceeeccCcceeeecccCC
Confidence 34788888889999999999998887755666666555444567777777776 3554444444433332222222222
Q ss_pred eeCC--CcccccchHHHHH--HHhhCCCceEE
Q 045642 279 MANG--GVIAPAGLHVLAL--AAKKHDVPFVV 306 (406)
Q Consensus 279 ~~nG--~vvnk~GT~~lAl--~Ak~~~vPv~V 306 (406)
..-| +++++.|+...++ .+...++.|--
T Consensus 148 ~~~G~va~vSqSG~l~~~~~~~~~~~g~G~s~ 179 (294)
T 2yv1_A 148 LKEGSVGMVSRSGTLTYEIAHQIKKAGFGVST 179 (294)
T ss_dssp CCEEEEEEEESCSHHHHHHHHHHHHTTCCEEE
T ss_pred CCCCCEEEEECCHHHHHHHHHHHHhCCCCeEE
Confidence 3234 6789999998776 45677777653
No 88
>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*
Probab=64.41 E-value=18 Score=34.48 Aligned_cols=111 Identities=14% Similarity=0.140 Sum_probs=65.0
Q ss_pred cCcEEEeccChHHHHHHHHHH-HHc-CCceEEEEecCCCCcchHHHHHHHHhCCCceEEEcc----hHHHHHhhcCCEEE
Q 045642 199 QNEVILTLGHSKFVKEFLCAA-KEK-KRSFEVFIADGAPKFEGHILAKELDKKGLKAIVITD----SAVFAMISRVNMVI 272 (406)
Q Consensus 199 ~g~~ILT~g~S~tV~~~L~~A-~~~-~~~f~ViV~EsrP~~eG~~~a~~L~~~GI~vt~I~D----sav~~~m~~vd~Vl 272 (406)
.+.+||+.|.++.+=..|... .+. |. .+|+++...+. ....+.+.|...++.+. ..| .++..++.++|.||
T Consensus 20 ~~k~vlVTGatG~iG~~l~~~L~~~~g~-~~V~~~~r~~~-~~~~~~~~~~~~~v~~~-~~Dl~d~~~l~~~~~~~D~Vi 96 (344)
T 2gn4_A 20 DNQTILITGGTGSFGKCFVRKVLDTTNA-KKIIVYSRDEL-KQSEMAMEFNDPRMRFF-IGDVRDLERLNYALEGVDICI 96 (344)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHHCCC-SEEEEEESCHH-HHHHHHHHHCCTTEEEE-ECCTTCHHHHHHHTTTCSEEE
T ss_pred CCCEEEEECCCcHHHHHHHHHHHhhCCC-CEEEEEECChh-hHHHHHHHhcCCCEEEE-ECCCCCHHHHHHHHhcCCEEE
Confidence 467888888877766655443 333 32 36777654332 22344555543444332 233 45667777787777
Q ss_pred EcceeEee--------CCCcccccchHHHHHHHhhCCCceEEecCCcc
Q 045642 273 VGVHAVMA--------NGGVIAPAGLHVLALAAKKHDVPFVVVASTHE 312 (406)
Q Consensus 273 lGAdav~~--------nG~vvnk~GT~~lAl~Ak~~~vPv~V~aes~K 312 (406)
--|-.... .---+|-.||..++-+|+.++++-+|...|.+
T Consensus 97 h~Aa~~~~~~~~~~~~~~~~~Nv~gt~~l~~aa~~~~v~~~V~~SS~~ 144 (344)
T 2gn4_A 97 HAAALKHVPIAEYNPLECIKTNIMGASNVINACLKNAISQVIALSTDK 144 (344)
T ss_dssp ECCCCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTCSEEEEECCGG
T ss_pred ECCCCCCCCchhcCHHHHHHHHHHHHHHHHHHHHhCCCCEEEEecCCc
Confidence 65521100 00013568999999999999987777766644
No 89
>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A
Probab=63.99 E-value=19 Score=32.96 Aligned_cols=108 Identities=15% Similarity=0.149 Sum_probs=63.2
Q ss_pred CcEEEeccChHHHHHHHHH-HHHcCCceEEEEecCCCCcchHHHHHHHHhCCCceEEE--cc-hHHHHHhhcCCEEEEcc
Q 045642 200 NEVILTLGHSKFVKEFLCA-AKEKKRSFEVFIADGAPKFEGHILAKELDKKGLKAIVI--TD-SAVFAMISRVNMVIVGV 275 (406)
Q Consensus 200 g~~ILT~g~S~tV~~~L~~-A~~~~~~f~ViV~EsrP~~eG~~~a~~L~~~GI~vt~I--~D-sav~~~m~~vd~VllGA 275 (406)
+.+||+.|.++.+=..+.. ..++| ..+|+++.-.|... -+..|...|+.+... .| .++..++..+|.|+.-|
T Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g-~~~V~~~~R~~~~~---~~~~l~~~~~~~~~~D~~d~~~l~~~~~~~d~vi~~a 80 (299)
T 2wm3_A 5 KKLVVVFGGTGAQGGSVARTLLEDG-TFKVRVVTRNPRKK---AAKELRLQGAEVVQGDQDDQVIMELALNGAYATFIVT 80 (299)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHC-SSEEEEEESCTTSH---HHHHHHHTTCEEEECCTTCHHHHHHHHTTCSEEEECC
T ss_pred CCEEEEECCCchHHHHHHHHHHhcC-CceEEEEEcCCCCH---HHHHHHHCCCEEEEecCCCHHHHHHHHhcCCEEEEeC
Confidence 4578888887766555443 33334 26788776555432 235566677765432 22 35566777788777654
Q ss_pred eeEeeCCCcccccchHHHHHHHhhCCCceEEecCCc
Q 045642 276 HAVMANGGVIAPAGLHVLALAAKKHDVPFVVVASTH 311 (406)
Q Consensus 276 dav~~nG~vvnk~GT~~lAl~Ak~~~vPv~V~aes~ 311 (406)
...-....-.+-.|+..+.-+|+..+++-+|.+.+.
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~aa~~~gv~~iv~~S~~ 116 (299)
T 2wm3_A 81 NYWESCSQEQEVKQGKLLADLARRLGLHYVVYSGLE 116 (299)
T ss_dssp CHHHHTCHHHHHHHHHHHHHHHHHHTCSEEEECCCC
T ss_pred CCCccccchHHHHHHHHHHHHHHHcCCCEEEEEcCc
Confidence 211000111233477788888888888877776554
No 90
>1yaa_A Aspartate aminotransferase; HET: PLP; 2.05A {Saccharomyces cerevisiae} SCOP: c.67.1.1
Probab=63.92 E-value=49 Score=31.54 Aligned_cols=102 Identities=13% Similarity=0.139 Sum_probs=53.9
Q ss_pred cCcEEE--eccChHHHHHHH--HHHHHcCCceEEEEecCCCCcchHHHHHHHHhCCCceEEEcc----------hHHHHH
Q 045642 199 QNEVIL--TLGHSKFVKEFL--CAAKEKKRSFEVFIADGAPKFEGHILAKELDKKGLKAIVITD----------SAVFAM 264 (406)
Q Consensus 199 ~g~~IL--T~g~S~tV~~~L--~~A~~~~~~f~ViV~EsrP~~eG~~~a~~L~~~GI~vt~I~D----------sav~~~ 264 (406)
...+++ |.|.+..+..++ ..+...| -+|++.+ |.+.+.. ..+...|.++..++- ..+...
T Consensus 96 ~~~i~~~~t~g~~~a~~~~~~~~~~~~~g--d~Vl~~~--p~~~~~~--~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~ 169 (412)
T 1yaa_A 96 EDRVISVQSLSGTGALHISAKFFSKFFPD--KLVYLSK--PTWANHM--AIFENQGLKTATYPYWANETKSLDLNGFLNA 169 (412)
T ss_dssp TTCEEEEEEEHHHHHHHHHHHHHHHHCTT--CCEEEEE--SCCTTHH--HHHHTTTCCEEEEECEETTTTEECHHHHHHH
T ss_pred cceEEEEeccchHhHHHHHHHHHHHhCCC--CEEEEeC--CCCccHH--HHHHHcCceEEEEeeecCCCCccCHHHHHHH
Confidence 456777 877776666553 3333233 2456553 6666633 334456888776642 123333
Q ss_pred hhc---CCEEEEcceeEeeCCCcccccchHHHHHHHhhCCCceEE
Q 045642 265 ISR---VNMVIVGVHAVMANGGVIAPAGLHVLALAAKKHDVPFVV 306 (406)
Q Consensus 265 m~~---vd~VllGAdav~~nG~vvnk~GT~~lAl~Ak~~~vPv~V 306 (406)
+.+ .+++++-+..--+.|.+...-=-..++-.|+.+++++++
T Consensus 170 l~~~~~~~~~~~~~~p~nPtG~~~~~~~l~~l~~~~~~~~~~li~ 214 (412)
T 1yaa_A 170 IQKAPEGSIFVLHSCAHNPTGLDPTSEQWVQIVDAIASKNHIALF 214 (412)
T ss_dssp HHHSCTTCEEEEECSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEE
T ss_pred HHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEE
Confidence 333 245554333223334433322223567788899988776
No 91
>2ctz_A O-acetyl-L-homoserine sulfhydrylase; crystal, O-acetyl homoserine sulfhydrase, structural genomic structural genomics/proteomics initiative; HET: PLP; 2.60A {Thermus thermophilus} SCOP: c.67.1.3
Probab=63.90 E-value=36 Score=33.13 Aligned_cols=99 Identities=15% Similarity=0.137 Sum_probs=55.3
Q ss_pred cEEEeccChHHHHHHHHHHHHcCCceEEEEecCCCCcchHHHHH--HHHhCCCceEEE-cc---hHHHHHhhcCCEEEEc
Q 045642 201 EVILTLGHSKFVKEFLCAAKEKKRSFEVFIADGAPKFEGHILAK--ELDKKGLKAIVI-TD---SAVFAMISRVNMVIVG 274 (406)
Q Consensus 201 ~~ILT~g~S~tV~~~L~~A~~~~~~f~ViV~EsrP~~eG~~~a~--~L~~~GI~vt~I-~D---sav~~~m~~vd~VllG 274 (406)
+.|++.+.+..+...+..+.+. .-+|++ +.|.+.|...+. .+...|+.+..+ .. ..+...+..-+++|+
T Consensus 75 ~~v~~~sGt~A~~~~l~~~~~~--gd~vi~--~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~d~~~l~~~i~~~~~~v~- 149 (421)
T 2ctz_A 75 AALATASGHAAQFLALTTLAQA--GDNIVS--TPNLYGGTFNQFKVTLKRLGIEVRFTSREERPEEFLALTDEKTRAWW- 149 (421)
T ss_dssp EEEEESSHHHHHHHHHHHHCCT--TCEEEE--CSCCCHHHHHHHHTHHHHTTCEEEECCTTCCHHHHHHHCCTTEEEEE-
T ss_pred ceEEecCHHHHHHHHHHHHhCC--CCEEEE--eCCCchHHHHHHHHHHHHcCCEEEEECCCCCHHHHHHhhccCCeEEE-
Confidence 4566555566666666655423 335555 356676643222 256789999998 42 233334433234444
Q ss_pred ceeEeeCCCcccccchHHHHHHHhhCCCceEE
Q 045642 275 VHAVMANGGVIAPAGLHVLALAAKKHDVPFVV 306 (406)
Q Consensus 275 Adav~~nG~vvnk~GT~~lAl~Ak~~~vPv~V 306 (406)
.+.+...+|.+.. -..++-+|+++++++++
T Consensus 150 ~~~~~n~~G~~~~--l~~i~~~a~~~g~~liv 179 (421)
T 2ctz_A 150 VESIGNPALNIPD--LEALAQAAREKGVALIV 179 (421)
T ss_dssp EESSCTTTCCCCC--HHHHHHHHHHHTCEEEE
T ss_pred EECCCCCCCcccC--HHHHHHHHHHcCCEEEE
Confidence 2333333333333 45678889999998886
No 92
>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}
Probab=63.66 E-value=19 Score=33.27 Aligned_cols=98 Identities=15% Similarity=0.169 Sum_probs=56.8
Q ss_pred cEEEeccChHHHHHHHHH-HHHcCCceEEEEecCCC-Cc---chHHHHHHHHhCCCceEEE--cc-hHHHHHhhcCCEEE
Q 045642 201 EVILTLGHSKFVKEFLCA-AKEKKRSFEVFIADGAP-KF---EGHILAKELDKKGLKAIVI--TD-SAVFAMISRVNMVI 272 (406)
Q Consensus 201 ~~ILT~g~S~tV~~~L~~-A~~~~~~f~ViV~EsrP-~~---eG~~~a~~L~~~GI~vt~I--~D-sav~~~m~~vd~Vl 272 (406)
.+||+.|.++.+=..+.. ..++| ++|+++.-.| .. +.......|...|+.+... .| .++..+++.+|.||
T Consensus 5 ~~ilVtGatG~iG~~l~~~L~~~g--~~V~~~~R~~~~~~~~~~~~~l~~~~~~~v~~v~~D~~d~~~l~~a~~~~d~vi 82 (321)
T 3c1o_A 5 EKIIIYGGTGYIGKFMVRASLSFS--HPTFIYARPLTPDSTPSSVQLREEFRSMGVTIIEGEMEEHEKMVSVLKQVDIVI 82 (321)
T ss_dssp CCEEEETTTSTTHHHHHHHHHHTT--CCEEEEECCCCTTCCHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHTTCSEEE
T ss_pred cEEEEEcCCchhHHHHHHHHHhCC--CcEEEEECCcccccChHHHHHHHHhhcCCcEEEEecCCCHHHHHHHHcCCCEEE
Confidence 457777876554443333 33334 5677765544 21 1222334556677765432 22 35666677665555
Q ss_pred EcceeEeeCCCcccccchHHHHHHHhhCC-CceEEe
Q 045642 273 VGVHAVMANGGVIAPAGLHVLALAAKKHD-VPFVVV 307 (406)
Q Consensus 273 lGAdav~~nG~vvnk~GT~~lAl~Ak~~~-vPv~V~ 307 (406)
. +.+...-.|+..++-+|+..+ ++-+|.
T Consensus 83 ~-------~a~~~~~~~~~~l~~aa~~~g~v~~~v~ 111 (321)
T 3c1o_A 83 S-------ALPFPMISSQIHIINAIKAAGNIKRFLP 111 (321)
T ss_dssp E-------CCCGGGSGGGHHHHHHHHHHCCCCEEEC
T ss_pred E-------CCCccchhhHHHHHHHHHHhCCccEEec
Confidence 4 434444678888998999888 887774
No 93
>2lpm_A Two-component response regulator; transcription regulator; NMR {Sinorhizobium meliloti}
Probab=63.62 E-value=13 Score=30.37 Aligned_cols=78 Identities=12% Similarity=0.258 Sum_probs=50.7
Q ss_pred CCceEEEEecCCCCcchHHHHHHHHhCCCceEEE-cchHHH-HHhh--cCCEEEEcceeEeeCCCcccccchHHHHHHHh
Q 045642 223 KRSFEVFIADGAPKFEGHILAKELDKKGLKAIVI-TDSAVF-AMIS--RVNMVIVGVHAVMANGGVIAPAGLHVLALAAK 298 (406)
Q Consensus 223 ~~~f~ViV~EsrP~~eG~~~a~~L~~~GI~vt~I-~Dsav~-~~m~--~vd~VllGAdav~~nG~vvnk~GT~~lAl~Ak 298 (406)
.++.+|.|+|..|... ..+...|.+.|..|+-. .+..-+ ..+. +.|.||+ |--++++ -| +.++-.-+
T Consensus 6 ~r~~rILiVdD~~~~~-~~l~~~L~~~G~~v~~~a~~g~eAl~~~~~~~~Dlvll--Di~mP~~-----~G-~el~~~lr 76 (123)
T 2lpm_A 6 ERRLRVLVVEDESMIA-MLIEDTLCELGHEVAATASRMQEALDIARKGQFDIAII--DVNLDGE-----PS-YPVADILA 76 (123)
T ss_dssp CCCCCEEEESSSTTTS-HHHHHHHHHHCCCCCBCSCCHHHHHHHHHHCCSSEEEE--CSSSSSC-----CS-HHHHHHHH
T ss_pred CCCCEEEEEeCCHHHH-HHHHHHHHHCCCEEEEEECCHHHHHHHHHhCCCCEEEE--ecCCCCC-----CH-HHHHHHHH
Confidence 4678999999998753 35677788899998644 443222 2232 4777777 3444432 34 44555556
Q ss_pred hCCCceEEecC
Q 045642 299 KHDVPFVVVAS 309 (406)
Q Consensus 299 ~~~vPv~V~ae 309 (406)
..++||++++.
T Consensus 77 ~~~ipvI~lTa 87 (123)
T 2lpm_A 77 ERNVPFIFATG 87 (123)
T ss_dssp HTCCSSCCBCT
T ss_pred cCCCCEEEEec
Confidence 78999998875
No 94
>3dyd_A Tyrosine aminotransferase; PLP, SGC, structural genomics, structural genomics consortium, disease mutation, phenylalani catabolism; HET: PLP; 2.30A {Homo sapiens} PDB: 3pdx_A*
Probab=63.34 E-value=39 Score=32.75 Aligned_cols=136 Identities=15% Similarity=0.185 Sum_probs=70.0
Q ss_pred HHHHHHHHHHHHH-----HH--HHHHHHHHHHHHHHHHh---cccCcEEEeccChHHHHHHHHHHHHcCCceEEEEecCC
Q 045642 165 KKLKSELIKAVNE-----LI--EDINTCREGIAEQAMEL---IHQNEVILTLGHSKFVKEFLCAAKEKKRSFEVFIADGA 234 (406)
Q Consensus 165 ~~~k~~l~~~i~~-----~~--~e~~~~~~~I~~~a~~~---I~~g~~ILT~g~S~tV~~~L~~A~~~~~~f~ViV~Esr 234 (406)
+.+++.+.+.++. +. ......++.+++..... +....+++|.|.+..+..++..+.+.| -+|++. .
T Consensus 74 ~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~la~~~~~~~~~~~~~~v~~t~g~t~al~~~~~~l~~~g--d~vl~~--~ 149 (427)
T 3dyd_A 74 PEVTQAMKDALDSGKYNGYAPSIGFLSSREEIASYYHCPEAPLEAKDVILTSGCSQAIDLCLAVLANPG--QNILVP--R 149 (427)
T ss_dssp HHHHHHHHHHHHHCCSSSCCCTTCCHHHHHHHHHHHCBTTBCCCGGGEEEESSHHHHHHHHHHHHCCTT--CEEEEE--E
T ss_pred HHHHHHHHHHHhcCcCCCCCCCCCcHHHHHHHHHHHhhcCCCCChHHEEEecCcHHHHHHHHHHhcCCC--CEEEEc--C
Confidence 4555555555543 10 01334455555543221 335578888887777777777665333 356655 4
Q ss_pred CCcchHHHHHHHHhCCCceEEEcch-------HHHHHhhcC---CEEEEcceeEeeCCCcccccchHHHHHHHhhCCCce
Q 045642 235 PKFEGHILAKELDKKGLKAIVITDS-------AVFAMISRV---NMVIVGVHAVMANGGVIAPAGLHVLALAAKKHDVPF 304 (406)
Q Consensus 235 P~~eG~~~a~~L~~~GI~vt~I~Ds-------av~~~m~~v---d~VllGAdav~~nG~vvnk~GT~~lAl~Ak~~~vPv 304 (406)
|.+.+.. ..+...|+++..++-. -+..+.+.+ .++++=...--+.|.+..+---..++-+|+++++++
T Consensus 150 p~~~~~~--~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~~ 227 (427)
T 3dyd_A 150 PGFSLYK--TLAESMGIEVKLYNLLPEKSWEIDLKQLEYLIDEKTACLIVNNPSNPCGSVFSKRHLQKILAVAARQCVPI 227 (427)
T ss_dssp SCCTHHH--HHHHHTTCEEEEEEEEGGGTTEECHHHHHSSCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCCE
T ss_pred CCchhHH--HHHHHcCCEEEEEecccccCCCCCHHHHHHHhccCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCEE
Confidence 6676643 3345678887766421 122222211 222221111112233333222456778899999988
Q ss_pred EE
Q 045642 305 VV 306 (406)
Q Consensus 305 ~V 306 (406)
++
T Consensus 228 i~ 229 (427)
T 3dyd_A 228 LA 229 (427)
T ss_dssp EE
T ss_pred EE
Confidence 86
No 95
>2i2w_A Phosphoheptose isomerase; lipopolysaccharide biosynthesis; 1.95A {Escherichia coli} PDB: 2i22_A 1x94_A
Probab=63.16 E-value=59 Score=28.50 Aligned_cols=34 Identities=21% Similarity=0.177 Sum_probs=27.9
Q ss_pred HHHHHHHHhCCCceEEEcchHHHHHhhcCCEEEE
Q 045642 240 HILAKELDKKGLKAIVITDSAVFAMISRVNMVIV 273 (406)
Q Consensus 240 ~~~a~~L~~~GI~vt~I~Dsav~~~m~~vd~Vll 273 (406)
...++.+++.|+++..|++..-..+.+.+|.+|.
T Consensus 148 i~~~~~ak~~G~~vIaIT~~~~s~La~~aD~~l~ 181 (212)
T 2i2w_A 148 IKAIAAAREKGMKVITLTGKDGGKMAGTADIEIR 181 (212)
T ss_dssp HHHHHHHHHHTCEEEEEEETTCGGGTTCSSEEEE
T ss_pred HHHHHHHHHCCCeEEEEECCCCCchHHhCCEEEE
Confidence 5678888889999999999876666677888876
No 96
>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}
Probab=63.12 E-value=17 Score=34.10 Aligned_cols=112 Identities=13% Similarity=0.039 Sum_probs=63.9
Q ss_pred cCcEEEeccChHHHHHHHH-HHHHcCCceEEEEecCCCCcchHHHHHHHH-hCCCceEEE--cc-hHHHHHhhc--CCEE
Q 045642 199 QNEVILTLGHSKFVKEFLC-AAKEKKRSFEVFIADGAPKFEGHILAKELD-KKGLKAIVI--TD-SAVFAMISR--VNMV 271 (406)
Q Consensus 199 ~g~~ILT~g~S~tV~~~L~-~A~~~~~~f~ViV~EsrP~~eG~~~a~~L~-~~GI~vt~I--~D-sav~~~m~~--vd~V 271 (406)
.+.+||+.|.++.+=..|. .+.++|..++|++....+........+.+. ..++.+... .| ..+..++.. +|.|
T Consensus 23 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~V 102 (346)
T 4egb_A 23 NAMNILVTGGAGFIGSNFVHYMLQSYETYKIINFDALTYSGNLNNVKSIQDHPNYYFVKGEIQNGELLEHVIKERDVQVI 102 (346)
T ss_dssp -CEEEEEETTTSHHHHHHHHHHHHHCTTEEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHHHHHHTCCEE
T ss_pred CCCeEEEECCccHHHHHHHHHHHhhCCCcEEEEEeccccccchhhhhhhccCCCeEEEEcCCCCHHHHHHHHhhcCCCEE
Confidence 4678999998877766554 444566678999887554322111111111 123332211 22 345666666 8888
Q ss_pred EEcceeEeeCC--------CcccccchHHHHHHHhhCCCceEEecCC
Q 045642 272 IVGVHAVMANG--------GVIAPAGLHVLALAAKKHDVPFVVVAST 310 (406)
Q Consensus 272 llGAdav~~nG--------~vvnk~GT~~lAl~Ak~~~vPv~V~aes 310 (406)
|--|-....+. --+|-.||..+.-+|+.++++-+|.+.+
T Consensus 103 ih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~v~~SS 149 (346)
T 4egb_A 103 VNFAAESHVDRSIENPIPFYDTNVIGTVTLLELVKKYPHIKLVQVST 149 (346)
T ss_dssp EECCCCC---------CHHHHHHTHHHHHHHHHHHHSTTSEEEEEEE
T ss_pred EECCcccchhhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeCc
Confidence 87654322111 1356789999999999999985554444
No 97
>3fdb_A Beta C-S lyase, putative PLP-dependent beta-cystathionase; PLP-dependent transferase-like fold, structural genomics; HET: LLP; 1.99A {Corynebacterium diphtheriae}
Probab=63.07 E-value=30 Score=32.43 Aligned_cols=103 Identities=15% Similarity=0.112 Sum_probs=56.3
Q ss_pred cccCcEEEeccChHHHHHHHHHHHHcCCceEEEEecCCCCcchHHHHHHHHhCCCceEEEc-----c-hHHHHHhh-cCC
Q 045642 197 IHQNEVILTLGHSKFVKEFLCAAKEKKRSFEVFIADGAPKFEGHILAKELDKKGLKAIVIT-----D-SAVFAMIS-RVN 269 (406)
Q Consensus 197 I~~g~~ILT~g~S~tV~~~L~~A~~~~~~f~ViV~EsrP~~eG~~~a~~L~~~GI~vt~I~-----D-sav~~~m~-~vd 269 (406)
+....+++|.|.+..+..++....+.| -+|++.+ |.+.+.. ..+...|.++..++ | ..+-..+. +..
T Consensus 79 ~~~~~i~~t~g~~~a~~~~~~~~~~~g--d~vl~~~--~~~~~~~--~~~~~~g~~~~~~~~~~~~d~~~l~~~l~~~~~ 152 (377)
T 3fdb_A 79 ARPEWIFPIPDVVRGLYIAIDHFTPAQ--SKVIVPT--PAYPPFF--HLLSATQREGIFIDATGGINLHDVEKGFQAGAR 152 (377)
T ss_dssp CCGGGEEEESCHHHHHHHHHHHHSCTT--CCEEEEE--SCCTHHH--HHHHHHTCCEEEEECTTSCCHHHHHHHHHTTCC
T ss_pred CCHHHEEEeCChHHHHHHHHHHhcCCC--CEEEEcC--CCcHhHH--HHHHHcCCEEEEccCCCCCCHHHHHHHhccCCC
Confidence 345567888777777776666664333 3455543 6666643 23444688888775 2 23333343 344
Q ss_pred EEEEcceeEeeCCCcccccchHHHHHHHhhCCCceEE
Q 045642 270 MVIVGVHAVMANGGVIAPAGLHVLALAAKKHDVPFVV 306 (406)
Q Consensus 270 ~VllGAdav~~nG~vvnk~GT~~lAl~Ak~~~vPv~V 306 (406)
.|++. ..--+.|.+...---..++-.|+.+++++++
T Consensus 153 ~v~i~-~p~nptG~~~~~~~l~~l~~~~~~~~~~li~ 188 (377)
T 3fdb_A 153 SILLC-NPYNPLGMVFAPEWLNELCDLAHRYDARVLV 188 (377)
T ss_dssp EEEEE-SSBTTTTBCCCHHHHHHHHHHHHHTTCEEEE
T ss_pred EEEEe-CCCCCCCCCCCHHHHHHHHHHHHHcCCEEEE
Confidence 44332 2111223333322334456678999998886
No 98
>1eg5_A Aminotransferase; PLP-dependent enzymes, iron-sulfur-cluster synthesis, C-S BE transferase; HET: PLP; 2.00A {Thermotoga maritima} SCOP: c.67.1.3 PDB: 1ecx_A*
Probab=63.01 E-value=96 Score=28.71 Aligned_cols=102 Identities=16% Similarity=0.157 Sum_probs=56.2
Q ss_pred CcEEEeccChHHHHHHHHHHHH--cCCceEEEEecCCCCcchH-HHHHHHHhCCCceEEEcc--------hHHHHHhhcC
Q 045642 200 NEVILTLGHSKFVKEFLCAAKE--KKRSFEVFIADGAPKFEGH-ILAKELDKKGLKAIVITD--------SAVFAMISRV 268 (406)
Q Consensus 200 g~~ILT~g~S~tV~~~L~~A~~--~~~~f~ViV~EsrP~~eG~-~~a~~L~~~GI~vt~I~D--------sav~~~m~~v 268 (406)
..+++|.|.+..+..++..+.. .+..-+|++. .|.+.+. ..+..+...|+++..++- ..+-..+..=
T Consensus 62 ~~v~~~~g~t~a~~~~~~~~~~~~~~~gd~vl~~--~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~ 139 (384)
T 1eg5_A 62 SEIFFTSCATESINWILKTVAETFEKRKRTIITT--PIEHKAVLETMKYLSMKGFKVKYVPVDSRGVVKLEELEKLVDED 139 (384)
T ss_dssp GGEEEESCHHHHHHHHHHHHHHHTTTTCCEEEEC--TTSCHHHHHHHHHHHHTTCEEEECCBCTTSCBCHHHHHHHCCTT
T ss_pred CeEEEECCHHHHHHHHHHhhhhhccCCCCEEEEC--CCCchHHHHHHHHHHhcCCEEEEEccCCCCccCHHHHHHHhCCC
Confidence 4678887777777777766651 0222355553 5666664 455566778988887752 1222233221
Q ss_pred CEEEEcceeEeeCCCcccccchHHHHHHHhhCC--CceEE
Q 045642 269 NMVIVGVHAVMANGGVIAPAGLHVLALAAKKHD--VPFVV 306 (406)
Q Consensus 269 d~VllGAdav~~nG~vvnk~GT~~lAl~Ak~~~--vPv~V 306 (406)
.++|+-...-...|.+.. -..++-+|++++ +++++
T Consensus 140 ~~~v~~~~~~nptG~~~~---~~~i~~l~~~~~~~~~li~ 176 (384)
T 1eg5_A 140 TFLVSIMAANNEVGTIQP---VEDVTRIVKKKNKETLVHV 176 (384)
T ss_dssp EEEEEEESBCTTTCBBCC---HHHHHHHHHHHCTTCEEEE
T ss_pred CeEEEEECCCCCcccccC---HHHHHHHHHhcCCceEEEE
Confidence 233332222222344444 256777888888 76665
No 99
>3l5o_A Uncharacterized protein from DUF364 family; RARE metals, siderophores, adenosyl binding site; 2.01A {Desulfitobacterium hafniense}
Probab=62.97 E-value=9 Score=36.12 Aligned_cols=88 Identities=14% Similarity=0.160 Sum_probs=61.5
Q ss_pred cCcEEEeccChHHHHHHHHHHHHcCCceEEEEecCCCCcchHHHHHHHHhCCCceEEEcchHHHHHhhcCCEEEEcceeE
Q 045642 199 QNEVILTLGHSKFVKEFLCAAKEKKRSFEVFIADGAPKFEGHILAKELDKKGLKAIVITDSAVFAMISRVNMVIVGVHAV 278 (406)
Q Consensus 199 ~g~~ILT~g~S~tV~~~L~~A~~~~~~f~ViV~EsrP~~eG~~~a~~L~~~GI~vt~I~Dsav~~~m~~vd~VllGAdav 278 (406)
.|+.|..+|+-..+.+++. +.++++|+|-.|.. |. .+|.+..+++++||.|++-+-+
T Consensus 140 ~g~kV~vIG~fP~i~~~~~------~~~~l~V~E~~p~~------------g~----~p~~~~~~~lp~~D~viiTgst- 196 (270)
T 3l5o_A 140 KGKKVGVVGHFPHLESLLE------PICDLSILEWSPEE------------GD----YPLPASEFILPECDYVYITCAS- 196 (270)
T ss_dssp TTSEEEEESCCTTHHHHHT------TTSEEEEEESSCCT------------TC----EEGGGHHHHGGGCSEEEEETHH-
T ss_pred CCCEEEEECCchhHHHHHh------cCCCEEEEECCCCC------------CC----CChhHHHHhhccCCEEEEEeeh-
Confidence 4788888998766554432 34678999998852 22 5889999999999999997654
Q ss_pred eeCCCcccccchHHHHHHHhhCCCceEEecCCcccccc
Q 045642 279 MANGGVIAPAGLHVLALAAKKHDVPFVVVASTHELCSL 316 (406)
Q Consensus 279 ~~nG~vvnk~GT~~lAl~Ak~~~vPv~V~aes~K~~~~ 316 (406)
++| ||..--|.-......|+++.+|--++|.
T Consensus 197 -----lvN--~Tl~~lL~~~~~a~~vvl~GPStp~~P~ 227 (270)
T 3l5o_A 197 -----VVD--KTLPRLLELSRNARRITLVGPGTPLAPV 227 (270)
T ss_dssp -----HHH--TCHHHHHHHTTTSSEEEEESTTCCCCGG
T ss_pred -----hhc--CCHHHHHhhCCCCCEEEEECCCchhhHH
Confidence 445 3444333333556788899999777763
No 100
>3l8a_A METC, putative aminotransferase, probable beta-cystathi; beta-cystathionase, lyase; HET: PLP; 1.54A {Streptococcus mutans}
Probab=62.93 E-value=72 Score=30.63 Aligned_cols=135 Identities=16% Similarity=0.154 Sum_probs=70.9
Q ss_pred HHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHh----cccCcEEEeccChHHHHHHHHHHHHcCCceEEEEecCCCC
Q 045642 165 KKLKSELIKAVNELIE----DINTCREGIAEQAMEL----IHQNEVILTLGHSKFVKEFLCAAKEKKRSFEVFIADGAPK 236 (406)
Q Consensus 165 ~~~k~~l~~~i~~~~~----e~~~~~~~I~~~a~~~----I~~g~~ILT~g~S~tV~~~L~~A~~~~~~f~ViV~EsrP~ 236 (406)
+++++.+.+.++.... ......+.+++...++ +....+++|-|.+..+..+++.+. ++.-+|++.+ |.
T Consensus 77 ~~v~~a~~~~~~~~~~~y~~~~~~l~~~l~~~l~~~~g~~~~~~~v~~~~g~~ea~~~a~~~~~--~~gd~Vi~~~--~~ 152 (421)
T 3l8a_A 77 PEIKEAIINYGREHIFGYNYFNDDLYQAVIDWERKEHDYAVVKEDILFIDGVVPAISIALQAFS--EKGDAVLINS--PV 152 (421)
T ss_dssp HHHHHHHHHHHHHCCSSCBCCCHHHHHHHHHHHHHHHCCCCCGGGEEEESCHHHHHHHHHHHHS--CTEEEEEEEE--SC
T ss_pred HHHHHHHHHHHhcCCcCCCCCCHHHHHHHHHHHHHHhCCCCCHHHEEEcCCHHHHHHHHHHHhc--CCCCEEEECC--CC
Confidence 4555555555543110 0123334455444443 234457777777767777777664 3344566544 66
Q ss_pred cchHHHHHHHHhCCCceEEEc----------c-hHHHHHhh--cCCEEEEcceeEeeCCCcccccchHHHHHHHhhCCCc
Q 045642 237 FEGHILAKELDKKGLKAIVIT----------D-SAVFAMIS--RVNMVIVGVHAVMANGGVIAPAGLHVLALAAKKHDVP 303 (406)
Q Consensus 237 ~eG~~~a~~L~~~GI~vt~I~----------D-sav~~~m~--~vd~VllGAdav~~nG~vvnk~GT~~lAl~Ak~~~vP 303 (406)
+.|... .+...|.++..++ | ..+-..+. ++..|++ ...--+.|.+..+---..++-+|+++++.
T Consensus 153 y~~~~~--~~~~~g~~~~~~~~~~~~~~~~~d~~~le~~i~~~~~~~vil-~~p~nptG~~~~~~~l~~l~~l~~~~~~~ 229 (421)
T 3l8a_A 153 YYPFAR--TIRLNDHRLVENSLQIINGRFEIDFEQLEKDIIDNNVKIYLL-CSPHNPGGRVWDNDDLIKIAELCKKHGVI 229 (421)
T ss_dssp CHHHHH--HHHHTTEEEEEEECEEETTEEECCHHHHHHHHHHTTEEEEEE-ESSBTTTTBCCCHHHHHHHHHHHHHHTCE
T ss_pred cHHHHH--HHHHCCCEEEeccccccCCCeeeCHHHHHHHhhccCCeEEEE-CCCCCCCCCcCCHHHHHHHHHHHHHcCCE
Confidence 777433 3344676666554 2 23444443 4544544 22222233333333445677789999998
Q ss_pred eEE
Q 045642 304 FVV 306 (406)
Q Consensus 304 v~V 306 (406)
+++
T Consensus 230 li~ 232 (421)
T 3l8a_A 230 LVS 232 (421)
T ss_dssp EEE
T ss_pred EEE
Confidence 886
No 101
>1mjh_A Protein (ATP-binding domain of protein MJ0577); hypothetical protein, structural genomics, functional assignment; HET: ATP; 1.70A {Methanocaldococcus jannaschii} SCOP: c.26.2.4
Probab=62.50 E-value=25 Score=28.85 Aligned_cols=60 Identities=25% Similarity=0.385 Sum_probs=35.1
Q ss_pred HHHhCCCceEEEc--c---hHHHHHhh--cCCEEEEcceeEeeCCCccc-ccchHHHHHHHhhCCCceEEec
Q 045642 245 ELDKKGLKAIVIT--D---SAVFAMIS--RVNMVIVGVHAVMANGGVIA-PAGLHVLALAAKKHDVPFVVVA 308 (406)
Q Consensus 245 ~L~~~GI~vt~I~--D---sav~~~m~--~vd~VllGAdav~~nG~vvn-k~GT~~lAl~Ak~~~vPv~V~a 308 (406)
.+...|++++... . ..+..+.. ++|.+++|++.- |++-. -.|+..-.+ .++..+||+|+-
T Consensus 91 ~~~~~g~~~~~~v~~G~~~~~I~~~a~~~~~dlIV~G~~g~---~~~~~~~~GSv~~~v-l~~~~~pVlvv~ 158 (162)
T 1mjh_A 91 ELEDVGFKVKDIIVVGIPHEEIVKIAEDEGVDIIIMGSHGK---TNLKEILLGSVTENV-IKKSNKPVLVVK 158 (162)
T ss_dssp HHHHTTCEEEEEEEEECHHHHHHHHHHHTTCSEEEEESCCS---SCCTTCSSCHHHHHH-HHHCCSCEEEEC
T ss_pred HHHHcCCceEEEEcCCCHHHHHHHHHHHcCCCEEEEcCCCC---CCccceEecchHHHH-HHhCCCCEEEEe
Confidence 3445677655321 1 12233333 699999999852 33332 367655444 445689999984
No 102
>2dum_A Hypothetical protein PH0823; conserved hypothetical protein, putative universal protein A structural genomics, NPPSFA; 2.75A {Pyrococcus horikoshii}
Probab=62.43 E-value=17 Score=30.34 Aligned_cols=61 Identities=15% Similarity=0.214 Sum_probs=35.6
Q ss_pred HHHHhCCCceEE---Ecc----hHHHHHhh--cCCEEEEcceeEeeCCCccc-ccchHHHHHHHhhCCCceEEec
Q 045642 244 KELDKKGLKAIV---ITD----SAVFAMIS--RVNMVIVGVHAVMANGGVIA-PAGLHVLALAAKKHDVPFVVVA 308 (406)
Q Consensus 244 ~~L~~~GI~vt~---I~D----sav~~~m~--~vd~VllGAdav~~nG~vvn-k~GT~~lAl~Ak~~~vPv~V~a 308 (406)
+.+...|+++.. +.. ..+..+.. ++|.||+|++.- +++-. -.|+..--+ .++..+||+|+-
T Consensus 85 ~~~~~~g~~~~~~~~~~~g~~~~~I~~~a~~~~~DlIV~G~~g~---~~~~~~~~Gsv~~~v-l~~~~~PVlvv~ 155 (170)
T 2dum_A 85 EEVKRAFRAKNVRTIIRFGIPWDEIVKVAEEENVSLIILPSRGK---LSLSHEFLGSTVMRV-LRKTKKPVLIIK 155 (170)
T ss_dssp HHHHHHTTCSEEEEEEEEECHHHHHHHHHHHTTCSEEEEESCCC---CC--TTCCCHHHHHH-HHHCSSCEEEEC
T ss_pred HHHHHcCCceeeeeEEecCChHHHHHHHHHHcCCCEEEECCCCC---CccccceechHHHHH-HHhCCCCEEEEc
Confidence 344456887664 222 23333344 799999999852 33332 356654444 455789999984
No 103
>4adb_A Succinylornithine transaminase; transferase, PLP enzymes, aminotransferase; HET: PLP; 2.20A {Escherichia coli} PDB: 4adc_A* 4add_A* 4ade_A
Probab=61.84 E-value=81 Score=29.73 Aligned_cols=137 Identities=16% Similarity=0.203 Sum_probs=69.5
Q ss_pred HHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHhcccCcEEEeccChHHHHHHHHHHHH-------cCCceEEEEecC
Q 045642 165 KKLKSELIKAVNELIE----DINTCREGIAEQAMELIHQNEVILTLGHSKFVKEFLCAAKE-------KKRSFEVFIADG 233 (406)
Q Consensus 165 ~~~k~~l~~~i~~~~~----e~~~~~~~I~~~a~~~I~~g~~ILT~g~S~tV~~~L~~A~~-------~~~~f~ViV~Es 233 (406)
+++++.+.+.++++.. .-....+.+.+..++++....+++|.|.+..+..+++.+.. .|+ -+|++.+
T Consensus 58 p~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~v~~~~gg~~a~~~al~~~~~~~~~~~~~g~-~~vi~~~- 135 (406)
T 4adb_A 58 PELREALNEQASKFWHTGNGYTNEPVLRLAKKLIDATFADRVFFCNSGAEANEAALKLARKFAHDRYGSHK-SGIVAFK- 135 (406)
T ss_dssp HHHHHHHHHHHTTCSCCCTTSCCHHHHHHHHHHHHHSSCSEEEEESSHHHHHHHHHHHHHHHHHHHTCTTC-CEEEEET-
T ss_pred HHHHHHHHHHHHhcccccCCcCCHHHHHHHHHHHhhCCCCeEEEeCcHHHHHHHHHHHHHHHHHhcCCCCC-cEEEEEC-
Confidence 4555556555544210 00112233444444555555788888888888877776653 233 3555543
Q ss_pred CCCcchH-HHHHHHHh----------CCCceEEEc--ch-HHHHHhh-cCCEEEEcceeEeeCCCcc--cccchHHHHHH
Q 045642 234 APKFEGH-ILAKELDK----------KGLKAIVIT--DS-AVFAMIS-RVNMVIVGVHAVMANGGVI--APAGLHVLALA 296 (406)
Q Consensus 234 rP~~eG~-~~a~~L~~----------~GI~vt~I~--Ds-av~~~m~-~vd~VllGAdav~~nG~vv--nk~GT~~lAl~ 296 (406)
|.+.|. ..+..+.. .+.++..++ |- ++-..+. ++..|++- -+.+.|+++ ...=-..++-+
T Consensus 136 -~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~~~--p~np~g~~~~~~~~~l~~l~~l 212 (406)
T 4adb_A 136 -NAFHGRTLFTVSAGGQPAYSQDFAPLPADIRHAAYNDINSASALIDDSTCAVIVE--PIQGEGGVVPASNAFLQGLREL 212 (406)
T ss_dssp -TCCCCSSHHHHHHSSCGGGTGGGCSCCSSEEEECTTCHHHHHTTCSTTEEEEEEC--SEETTTTSEECCHHHHHHHHHH
T ss_pred -CCcCCCcHHHhhccCCccccccCCCCCCCceEeCCCcHHHHHHHhcCCeEEEEEe--CCcCCCCCccCCHHHHHHHHHH
Confidence 344442 22333221 113444442 31 1222222 23333333 456666666 44444567788
Q ss_pred HhhCCCceEE
Q 045642 297 AKKHDVPFVV 306 (406)
Q Consensus 297 Ak~~~vPv~V 306 (406)
|++|++++++
T Consensus 213 ~~~~~~~li~ 222 (406)
T 4adb_A 213 CNRHNALLIF 222 (406)
T ss_dssp HHHTTCEEEE
T ss_pred HHHcCCEEEE
Confidence 9999998886
No 104
>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=61.84 E-value=37 Score=31.46 Aligned_cols=110 Identities=16% Similarity=0.153 Sum_probs=60.1
Q ss_pred cCcEEEeccChHHHHHHHHHHHHcCCceEEEEecCCCCcchHHHHHHHHh-CCCceEEE-cc----hHHHHHhh--cCCE
Q 045642 199 QNEVILTLGHSKFVKEFLCAAKEKKRSFEVFIADGAPKFEGHILAKELDK-KGLKAIVI-TD----SAVFAMIS--RVNM 270 (406)
Q Consensus 199 ~g~~ILT~g~S~tV~~~L~~A~~~~~~f~ViV~EsrP~~eG~~~a~~L~~-~GI~vt~I-~D----sav~~~m~--~vd~ 270 (406)
.+.+||+.|.++.+=..|..... .+..+|+++.-.+.... ...+.+.. .+-.+.++ .| .++..++. ++|.
T Consensus 4 ~~~~vlVTGatG~iG~~l~~~L~-~~G~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~ 81 (341)
T 3enk_A 4 TKGTILVTGGAGYIGSHTAVELL-AHGYDVVIADNLVNSKR-EAIARIEKITGKTPAFHETDVSDERALARIFDAHPITA 81 (341)
T ss_dssp SSCEEEEETTTSHHHHHHHHHHH-HTTCEEEEECCCSSSCT-HHHHHHHHHHSCCCEEECCCTTCHHHHHHHHHHSCCCE
T ss_pred CCcEEEEecCCcHHHHHHHHHHH-HCCCcEEEEecCCcchH-HHHHHHHhhcCCCceEEEeecCCHHHHHHHHhccCCcE
Confidence 45688888988877666554432 23467888765544322 22333332 13333333 22 34556666 5666
Q ss_pred EEEcceeEeeCC--------CcccccchHHHHHHHhhCCCceEEecCC
Q 045642 271 VIVGVHAVMANG--------GVIAPAGLHVLALAAKKHDVPFVVVAST 310 (406)
Q Consensus 271 VllGAdav~~nG--------~vvnk~GT~~lAl~Ak~~~vPv~V~aes 310 (406)
||--|-...... --.|-.|+..++-+|+..+++-+|...+
T Consensus 82 vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS 129 (341)
T 3enk_A 82 AIHFAALKAVGESVAKPIEYYRNNLDSLLSLLRVMRERAVKRIVFSSS 129 (341)
T ss_dssp EEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEE
T ss_pred EEECccccccCccccChHHHHHHHHHHHHHHHHHHHhCCCCEEEEEec
Confidence 665442110000 0125678999999999988765555444
No 105
>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}
Probab=61.79 E-value=25 Score=32.39 Aligned_cols=100 Identities=14% Similarity=0.093 Sum_probs=57.3
Q ss_pred cEEEeccChHHHHHHHHHHHHcCCceEEEEecCCCCcchHHHHHHHHhCCCceEEEcc---hHHHHHhhcCCEEEEccee
Q 045642 201 EVILTLGHSKFVKEFLCAAKEKKRSFEVFIADGAPKFEGHILAKELDKKGLKAIVITD---SAVFAMISRVNMVIVGVHA 277 (406)
Q Consensus 201 ~~ILT~g~S~tV~~~L~~A~~~~~~f~ViV~EsrP~~eG~~~a~~L~~~GI~vt~I~D---sav~~~m~~vd~VllGAda 277 (406)
.+||..|.++.+=..|.....+ +..+|+++.-.|.... |. ++.+.. .| .++..+++++|.||--|-.
T Consensus 3 ~~vlVtGatG~iG~~l~~~L~~-~g~~V~~~~r~~~~~~------~~--~~~~~~-~Dl~~~~~~~~~~~~d~Vih~a~~ 72 (311)
T 3m2p_A 3 LKIAVTGGTGFLGQYVVESIKN-DGNTPIILTRSIGNKA------IN--DYEYRV-SDYTLEDLINQLNDVDAVVHLAAT 72 (311)
T ss_dssp CEEEEETTTSHHHHHHHHHHHH-TTCEEEEEESCCC-------------CCEEEE-CCCCHHHHHHHTTTCSEEEECCCC
T ss_pred CEEEEECCCcHHHHHHHHHHHh-CCCEEEEEeCCCCccc------CC--ceEEEE-ccccHHHHHHhhcCCCEEEEcccc
Confidence 4688888887776665554422 2467887765533211 22 554322 33 3455566777777765432
Q ss_pred EeeC----CCcccccchHHHHHHHhhCCCceEEecCC
Q 045642 278 VMAN----GGVIAPAGLHVLALAAKKHDVPFVVVAST 310 (406)
Q Consensus 278 v~~n----G~vvnk~GT~~lAl~Ak~~~vPv~V~aes 310 (406)
...+ ---+|-.||..++-+|+..+++-+|...+
T Consensus 73 ~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~r~v~~SS 109 (311)
T 3m2p_A 73 RGSQGKISEFHDNEILTQNLYDACYENNISNIVYAST 109 (311)
T ss_dssp CCSSSCGGGTHHHHHHHHHHHHHHHHTTCCEEEEEEE
T ss_pred CCCCChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcc
Confidence 2111 01246779999999999999984444433
No 106
>3uwc_A Nucleotide-sugar aminotransferase; lipopolysaccharide biosynthesis; HET: MSE PMP; 1.80A {Coxiella burnetii}
Probab=61.77 E-value=15 Score=34.52 Aligned_cols=99 Identities=18% Similarity=0.152 Sum_probs=56.8
Q ss_pred HHHHhcccCcEEEeccChHHHHHHHHHH-HHcCCceEEEEecCCCCcchHHHHHHHHhCCCceEEEcch--------HHH
Q 045642 192 QAMELIHQNEVILTLGHSKFVKEFLCAA-KEKKRSFEVFIADGAPKFEGHILAKELDKKGLKAIVITDS--------AVF 262 (406)
Q Consensus 192 ~a~~~I~~g~~ILT~g~S~tV~~~L~~A-~~~~~~f~ViV~EsrP~~eG~~~a~~L~~~GI~vt~I~Ds--------av~ 262 (406)
..++++.....++|-|.+..+..++..+ .+. .-+|++. .|.+.+.. ..+...|+++..++-. .+.
T Consensus 46 ~la~~~~~~~~~~~~~gt~a~~~~~~~~~~~~--gd~v~~~--~~~~~~~~--~~~~~~g~~~~~~~~~~~~~~d~~~l~ 119 (374)
T 3uwc_A 46 RFAALHNAPHAIGVGTGTDALAMSFKMLNIGA--GDEVITC--ANTFIASV--GAIVQAGATPVLVDSENGYVIDPEKIE 119 (374)
T ss_dssp HHHHHTTCSEEEEESCHHHHHHHHHHHTTCCT--TCEEEEE--SSSCHHHH--HHHHHTTCEEEEECBCTTSSBCGGGTG
T ss_pred HHHHHhCCCcEEEeCCHHHHHHHHHHHcCCCC--CCEEEEC--CCccHHHH--HHHHHcCCEEEEEecCCCCCcCHHHHH
Confidence 3344555557788877777776666665 322 3355554 45565543 3356789988887632 111
Q ss_pred HHhhcCCEEEEcceeEeeCCCcccccch----HHHHHHHhhCCCceEE
Q 045642 263 AMISRVNMVIVGVHAVMANGGVIAPAGL----HVLALAAKKHDVPFVV 306 (406)
Q Consensus 263 ~~m~~vd~VllGAdav~~nG~vvnk~GT----~~lAl~Ak~~~vPv~V 306 (406)
..+.+-.++++ +.|..|+ ..++-+|+.+++++++
T Consensus 120 ~~~~~~~~~v~----------~~n~~G~~~~~~~i~~~~~~~~~~li~ 157 (374)
T 3uwc_A 120 AAITDKTKAIM----------PVHYTGNIADMPALAKIAKKHNLHIVE 157 (374)
T ss_dssp GGCCTTEEEEC----------CBCGGGCCCCHHHHHHHHHHTTCEEEE
T ss_pred HhCCCCceEEE----------EeCCcCCcCCHHHHHHHHHHcCCEEEE
Confidence 11222123333 2334443 5577889999998887
No 107
>3mad_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxal phosphate; HET: LLP; 2.00A {Symbiobacterium thermophilum} PDB: 3maf_A* 3mau_A* 3mbb_A*
Probab=61.66 E-value=29 Score=34.69 Aligned_cols=99 Identities=20% Similarity=0.236 Sum_probs=56.7
Q ss_pred EEeccChHHHHHHHHHHHHcCC------ceEEEEecCCCCcchHHHHHHHHhCCCceEEEc-------c-hHHHHHhhcC
Q 045642 203 ILTLGHSKFVKEFLCAAKEKKR------SFEVFIADGAPKFEGHILAKELDKKGLKAIVIT-------D-SAVFAMISRV 268 (406)
Q Consensus 203 ILT~g~S~tV~~~L~~A~~~~~------~f~ViV~EsrP~~eG~~~a~~L~~~GI~vt~I~-------D-sav~~~m~~v 268 (406)
++|.|.+..+...++.+.+.++ +-+|++. .|.+.+ +.+.+...|+.+..++ | .++-..+.+-
T Consensus 164 ~~t~ggt~a~~~al~a~~~~g~~~~g~~~d~Vi~~--~~~~~~--~~~~~~~~G~~v~~v~~~~~~~~d~~~Le~~i~~~ 239 (514)
T 3mad_A 164 TVTSGGTESLLLAMKTYRDWARATKGITAPEAVVP--VSAHAA--FDKAAQYFGIKLVRTPLDADYRADVAAMREAITPN 239 (514)
T ss_dssp EEESSHHHHHHHHHHHHHHHHHHHHCCSSCEEEEE--TTSCTH--HHHHHHHHTCEEEEECBCTTSCBCHHHHHHHCCTT
T ss_pred EEcCcHHHHHHHHHHHHHHHhhhhcCCCCCeEEEe--CccchH--HHHHHHHcCCeeEEeeeCCCCCCCHHHHHHHhccC
Confidence 8888888777777777754431 1456664 455555 2333444588888886 3 2333444332
Q ss_pred CEEEEcceeEeeCCCcccccchHHHHHHHhhCCCceEEec
Q 045642 269 NMVIVGVHAVMANGGVIAPAGLHVLALAAKKHDVPFVVVA 308 (406)
Q Consensus 269 d~VllGAdav~~nG~vvnk~GT~~lAl~Ak~~~vPv~V~a 308 (406)
.++|+...--...|.+ .. --.++-+|++|+++++|=+
T Consensus 240 ~~~v~~~~~~nptG~~-~~--l~~i~~la~~~~i~livDe 276 (514)
T 3mad_A 240 TVVVAGSAPGYPHGVV-DP--IPEIAALAAEHGIGCHVDA 276 (514)
T ss_dssp EEEEEEETTCTTTCCC-CC--HHHHHHHHHHHTCEEEEEC
T ss_pred CEEEEEeCCCCCCccc-cC--HHHHHHHHHHhCCeEEEec
Confidence 3444333222223333 33 2567888999999988743
No 108
>3jtx_A Aminotransferase; NP_283882.1, structural genomics, joint CE structural genomics, JCSG, protein structure initiative; HET: LLP MES; 1.91A {Neisseria meningitidis Z2491}
Probab=61.41 E-value=25 Score=33.36 Aligned_cols=103 Identities=14% Similarity=0.110 Sum_probs=56.6
Q ss_pred cC-cEEEeccChHHHHHHHHHHHHcCC---ceEEEEecCCCCcchHHHHHHHHhCCCceEEEc--------c-hHHHHHh
Q 045642 199 QN-EVILTLGHSKFVKEFLCAAKEKKR---SFEVFIADGAPKFEGHILAKELDKKGLKAIVIT--------D-SAVFAMI 265 (406)
Q Consensus 199 ~g-~~ILT~g~S~tV~~~L~~A~~~~~---~f~ViV~EsrP~~eG~~~a~~L~~~GI~vt~I~--------D-sav~~~m 265 (406)
.. .+++|.|.+..+..++..+.+.|. +-+|++. .|.+.+... .+...|.++..++ | .++...+
T Consensus 90 ~~~~i~~t~g~~~al~~~~~~~~~~g~~~~~d~vl~~--~p~~~~~~~--~~~~~g~~~~~v~~~~~g~~~d~~~l~~~~ 165 (396)
T 3jtx_A 90 ADNEILPVLGSREALFSFVQTVLNPVSDGIKPAIVSP--NPFYQIYEG--ATLLGGGEIHFANCPAPSFNPDWRSISEEV 165 (396)
T ss_dssp TTTSEEEESSHHHHHHHHHHHHCCC---CCCCEEEEE--ESCCHHHHH--HHHHTTCEEEEEECCTTTCCCCGGGSCHHH
T ss_pred CCCeEEEcCCcHHHHHHHHHHHhCCCCccCCCEEEEc--CCCcHhHHH--HHHHcCCEEEEeecCCCCCccCHHHHHHhh
Confidence 45 678888877777777766653331 1355554 466766433 3455788887775 2 1222222
Q ss_pred -hcCCEEEEcceeEeeCCCcccccchHHHHHHHhhCCCceEE
Q 045642 266 -SRVNMVIVGVHAVMANGGVIAPAGLHVLALAAKKHDVPFVV 306 (406)
Q Consensus 266 -~~vd~VllGAdav~~nG~vvnk~GT~~lAl~Ak~~~vPv~V 306 (406)
++...|++- .---+.|.++..---..++-.|++|++++++
T Consensus 166 ~~~~~~v~l~-~p~nptG~~~~~~~l~~i~~~~~~~~~~li~ 206 (396)
T 3jtx_A 166 WKRTKLVFVC-SPNNPSGSVLDLDGWKEVFDLQDKYGFIIAS 206 (396)
T ss_dssp HHTEEEEEEE-SSCTTTCCCCCHHHHHHHHHHHHHHCCEEEE
T ss_pred ccCcEEEEEE-CCCCCCCCcCCHHHHHHHHHHHHHcCCEEEE
Confidence 344444442 2222234444433334477788999998876
No 109
>1bs0_A Protein (8-amino-7-oxonanoate synthase); PLP-dependent acyl-COA synthase, biotin biosynthesis, 8-AMIN oxonanoate synthase; 1.65A {Escherichia coli} SCOP: c.67.1.4 PDB: 2g6w_A* 1dje_A* 1dj9_A*
Probab=61.38 E-value=1.1e+02 Score=28.68 Aligned_cols=129 Identities=9% Similarity=0.068 Sum_probs=67.1
Q ss_pred HHHHHHHHHHHHHHH-------------HHHHHHHHHHHHHHHHhcccCcEEEeccChHHHHHHHHHHHHcCCceEEEEe
Q 045642 165 KKLKSELIKAVNELI-------------EDINTCREGIAEQAMELIHQNEVILTLGHSKFVKEFLCAAKEKKRSFEVFIA 231 (406)
Q Consensus 165 ~~~k~~l~~~i~~~~-------------~e~~~~~~~I~~~a~~~I~~g~~ILT~g~S~tV~~~L~~A~~~~~~f~ViV~ 231 (406)
+++++.+.+.++.+- ......++.+++. +.-.+.|++.+.+..+..++.... ++.-.|++.
T Consensus 56 ~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~----~g~~~~i~~~sGt~a~~~~~~~~~--~~gd~v~~~ 129 (384)
T 1bs0_A 56 PQIIRAWQQGAEQFGIGSGGSGHVSGYSVVHQALEEELAEW----LGYSRALLFISGFAANQAVIAAMM--AKEDRIAAD 129 (384)
T ss_dssp HHHHHHHHHHHHHHCSCCCSBTTTTCCCHHHHHHHHHHHHH----HTCSEEEEESCHHHHHHHHHHHHC--CTTCEEEEE
T ss_pred HHHHHHHHHHHHHhCCCCCCcCcccCChHHHHHHHHHHHHH----hCCCcEEEeCCcHHHHHHHHHHhC--CCCcEEEEc
Confidence 556666666665421 2233444555543 332356666555766666665543 233344443
Q ss_pred cCCCCcchHHHHHHHHhCCCceEEEcc---hHHHHHhhcC---CEEEEcceeEeeCCCcccccchHHHHHHHhhCCCceE
Q 045642 232 DGAPKFEGHILAKELDKKGLKAIVITD---SAVFAMISRV---NMVIVGVHAVMANGGVIAPAGLHVLALAAKKHDVPFV 305 (406)
Q Consensus 232 EsrP~~eG~~~a~~L~~~GI~vt~I~D---sav~~~m~~v---d~VllGAdav~~nG~vvnk~GT~~lAl~Ak~~~vPv~ 305 (406)
.|.+.+ +...+...|.++..++- ..+...+.+. .++++-...--+.|.+.. -..++-+|++++++++
T Consensus 130 --~~~~~~--~~~~~~~~g~~~~~~~~~d~~~l~~~l~~~~~~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li 202 (384)
T 1bs0_A 130 --RLSHAS--LLEAASLSPSQLRRFAHNDVTHLARLLASPCPGQQMVVTEGVFSMDGDSAP---LAEIQQVTQQHNGWLM 202 (384)
T ss_dssp --TTCCHH--HHHHHHTSSSEEEEECTTCHHHHHHHHHSCCSSCEEEEEESBCTTTCCBCC---HHHHHHHHHHTTCEEE
T ss_pred --ccccHH--HHHHHHHcCCCEEEeCCCCHHHHHHHHHhcCCCCeEEEEeCCCCCCCCccC---HHHHHHHHHHcCcEEE
Confidence 355443 23344557988888762 2333344432 344432212122344443 3567788999998877
Q ss_pred E
Q 045642 306 V 306 (406)
Q Consensus 306 V 306 (406)
+
T Consensus 203 ~ 203 (384)
T 1bs0_A 203 V 203 (384)
T ss_dssp E
T ss_pred E
Confidence 6
No 110
>3vax_A Putative uncharacterized protein DNDA; desulfurase, transferase; HET: PLP; 2.40A {Streptomyces lividans}
Probab=61.19 E-value=1.1e+02 Score=28.70 Aligned_cols=113 Identities=14% Similarity=0.143 Sum_probs=58.4
Q ss_pred HHHHHHHHhccc--CcEEEeccChHHHHHHHHHHH----HcCCceEEEEecCCCCcch-HHHHHHHHhCCCceEEEcch-
Q 045642 188 GIAEQAMELIHQ--NEVILTLGHSKFVKEFLCAAK----EKKRSFEVFIADGAPKFEG-HILAKELDKKGLKAIVITDS- 259 (406)
Q Consensus 188 ~I~~~a~~~I~~--g~~ILT~g~S~tV~~~L~~A~----~~~~~f~ViV~EsrP~~eG-~~~a~~L~~~GI~vt~I~Ds- 259 (406)
.+.+..++++.- ..+++|-|.+..+..++..+. +.|. .+|++.+ |.+.+ ...+..+...|+++..++-.
T Consensus 67 ~l~~~la~~~~~~~~~v~~~~g~t~al~~~~~~l~~~~~~~gd-~~Vl~~~--~~~~~~~~~~~~~~~~g~~~~~v~~~~ 143 (400)
T 3vax_A 67 RAREYLASTVSAEPDELIFTSGATESNNIALLGLAPYGERTGR-RHIITSA--IEHKAVLEPLEHLAGRGFEVDFLTPGP 143 (400)
T ss_dssp HHHHHHHHHTTCCGGGEEEESCHHHHHHHHHHTTHHHHHHHTC-CEEEEET--TSCHHHHHHHHHHHTTTCEEEEECCCT
T ss_pred HHHHHHHHHcCCCCCcEEEeCCHHHHHHHHHHHHHHhhccCCC-CEEEECc--cccHhHHHHHHHHHhcCCeEEEEccCC
Confidence 333334445542 357777776666666666553 3343 1566653 33334 23344556689998888632
Q ss_pred -------HHHHHhhcCCEEEEcceeEeeCCCcccccchHHHHHHHhhCCCceEE
Q 045642 260 -------AVFAMISRVNMVIVGVHAVMANGGVIAPAGLHVLALAAKKHDVPFVV 306 (406)
Q Consensus 260 -------av~~~m~~vd~VllGAdav~~nG~vvnk~GT~~lAl~Ak~~~vPv~V 306 (406)
++-..+..-.++++-...--..|.+.. -..++-+|+++++++++
T Consensus 144 ~~~~d~~~l~~~i~~~~~~v~~~~~~nptG~~~~---l~~i~~la~~~~~~li~ 194 (400)
T 3vax_A 144 SGRISVEGVMERLRPDTLLVSLMHVNNETGVIQP---VAELAQQLRATPTYLHV 194 (400)
T ss_dssp TCCCCHHHHHTTCCTTEEEEECCSBCTTTCBBCC---HHHHHHHHTTSSCEEEE
T ss_pred CCCcCHHHHHHhcCCCceEEEEECCCCCceeeCc---HHHHHHHHHhcCCEEEE
Confidence 122222222233333222222333322 25677889999988876
No 111
>2zyj_A Alpha-aminodipate aminotransferase; alpha-aminoadipate aminotransferase; HET: PGU; 1.67A {Thermus thermophilus} PDB: 2egy_A* 2dtv_A* 2zg5_A* 2zp7_A* 2z1y_A* 3cbf_A*
Probab=61.05 E-value=66 Score=30.45 Aligned_cols=134 Identities=16% Similarity=0.181 Sum_probs=68.5
Q ss_pred HHHHHHHHHHHHHHHH---------HHHHHHHHHHHHHHHhcccCcEEEeccChHHHHHHHHHHHHcCCceEEEEecCCC
Q 045642 165 KKLKSELIKAVNELIE---------DINTCREGIAEQAMELIHQNEVILTLGHSKFVKEFLCAAKEKKRSFEVFIADGAP 235 (406)
Q Consensus 165 ~~~k~~l~~~i~~~~~---------e~~~~~~~I~~~a~~~I~~g~~ILT~g~S~tV~~~L~~A~~~~~~f~ViV~EsrP 235 (406)
+.+++.+.+.++.... .....++.+++.. . +....+++|.|.+..+..++....+.| -+|++. .|
T Consensus 50 ~~v~~a~~~~~~~~~~~~~~y~~~~~~~~l~~~la~~~-g-~~~~~v~~~~g~~~al~~~~~~~~~~g--d~Vl~~--~p 123 (397)
T 2zyj_A 50 EEAAEAAARILREKGEVALQYSPTEGYAPLRAFVAEWI-G-VRPEEVLITTGSQQALDLVGKVFLDEG--SPVLLE--AP 123 (397)
T ss_dssp HHHHHHHHHHHHHHHHHHTSCCCTTCCHHHHHHHHHHH-T-SCGGGEEEESHHHHHHHHHHHHHCCTT--CEEEEE--ES
T ss_pred HHHHHHHHHHHHhcchhhhCCCCCCCCHHHHHHHHHHh-C-CChhhEEEeccHHHHHHHHHHHhCCCC--CEEEEe--CC
Confidence 4555655555544210 1233445555443 1 334567888777777776766654333 355553 46
Q ss_pred CcchHHHHHHHHhCCCceEEEcc-------hHHHHHhh--cCCEEEEcceeEeeCCCcccccchHHHHHHHhhCCCceEE
Q 045642 236 KFEGHILAKELDKKGLKAIVITD-------SAVFAMIS--RVNMVIVGVHAVMANGGVIAPAGLHVLALAAKKHDVPFVV 306 (406)
Q Consensus 236 ~~eG~~~a~~L~~~GI~vt~I~D-------sav~~~m~--~vd~VllGAdav~~nG~vvnk~GT~~lAl~Ak~~~vPv~V 306 (406)
.+.|... .+...|.++..++- ..+-..+. ++..|++-...--+.|.+...-=-..++-.|+++++++++
T Consensus 124 ~y~~~~~--~~~~~g~~~~~~~~~~~~~d~~~l~~~l~~~~~~~v~~~~~~~nptG~~~~~~~l~~l~~~~~~~~~~li~ 201 (397)
T 2zyj_A 124 SYMGAIQ--AFRLQGPRFLTVPAGEEGPDLDALEEVLKRERPRFLYLIPSFQNPTGGLTPLPARKRLLQMVMERGLVVVE 201 (397)
T ss_dssp CCHHHHH--HHHTTCCEEEEEEEETTEECHHHHHHHHHHCCCSCEEECCBSCTTTCCBCCHHHHHHHHHHHHHHTCCEEE
T ss_pred CcHHHHH--HHHHcCCEEEecCcCCCCCCHHHHHHHHhhcCCeEEEECCCCcCCCCCcCCHHHHHHHHHHHHHcCCEEEE
Confidence 6766432 34457888777642 12333333 3444433221112223332221112577788999998886
No 112
>3isl_A Purine catabolism protein PUCG; pyridoxalphosphate, PLP dependent enzymes, purine metabolism transaminases, aminotransferases; HET: PLP; 2.06A {Bacillus subtilis}
Probab=60.82 E-value=1.1e+02 Score=28.74 Aligned_cols=95 Identities=16% Similarity=0.214 Sum_probs=54.4
Q ss_pred EeccChHHHHHHHHHHHHcCCceEEEEecCCCCcchHHHHHHHHhCCCceEEEcc--------hHHHHHhh--cCCEEEE
Q 045642 204 LTLGHSKFVKEFLCAAKEKKRSFEVFIADGAPKFEGHILAKELDKKGLKAIVITD--------SAVFAMIS--RVNMVIV 273 (406)
Q Consensus 204 LT~g~S~tV~~~L~~A~~~~~~f~ViV~EsrP~~eG~~~a~~L~~~GI~vt~I~D--------sav~~~m~--~vd~Vll 273 (406)
+|-|.+..+..++.... +..-+|++.+ |.+.|..+...+...|+++..++- ..+-..+. +...|++
T Consensus 67 ~~~s~t~al~~~~~~l~--~~gd~Vl~~~--~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~v~~ 142 (416)
T 3isl_A 67 IDGTSRAGIEAVLASVI--EPEDDVLIPI--YGRFGYLLTEIAERYGANVHMLECEWGTVFDPEDIIREIKKVKPKIVAM 142 (416)
T ss_dssp EESCHHHHHHHHHHHHC--CTTCEEEEEE--SSHHHHHHHHHHHHTTCEEEEEECCTTCCCCHHHHHHHHHHHCCSEEEE
T ss_pred ecCcHHHHHHHHHHHhc--CCCCEEEEec--CCcccHHHHHHHHhcCCeeEEEecCCCCCCCHHHHHHHHhhCCCcEEEE
Confidence 44444455555555554 3334666665 555564566677788998887752 23334443 4544444
Q ss_pred cceeEeeCCCcccccchHHHHHHHhhCCCceEE
Q 045642 274 GVHAVMANGGVIAPAGLHVLALAAKKHDVPFVV 306 (406)
Q Consensus 274 GAdav~~nG~vvnk~GT~~lAl~Ak~~~vPv~V 306 (406)
- ..--..|.+.. --.++-+|++|++++++
T Consensus 143 ~-~~~nptG~~~~---l~~i~~l~~~~~~~li~ 171 (416)
T 3isl_A 143 V-HGETSTGRIHP---LKAIGEACRTEDALFIV 171 (416)
T ss_dssp E-SEETTTTEECC---CHHHHHHHHHTTCEEEE
T ss_pred E-ccCCCCceecC---HHHHHHHHHHcCCEEEE
Confidence 3 32223343333 35688889999998887
No 113
>2huf_A Alanine glyoxylate aminotransferase; alpha and beta protein, PLP-dependent transferase; HET: LLP; 1.75A {Aedes aegypti} PDB: 2hui_A* 2huu_A*
Probab=60.82 E-value=43 Score=31.52 Aligned_cols=98 Identities=13% Similarity=0.175 Sum_probs=55.0
Q ss_pred cEEEeccChHHHHHHHHHHHHcCCceEEEEecCCCCcchHHHHHHHHhCCCceEEEc-------c-hHHHHHh-h-cCCE
Q 045642 201 EVILTLGHSKFVKEFLCAAKEKKRSFEVFIADGAPKFEGHILAKELDKKGLKAIVIT-------D-SAVFAMI-S-RVNM 270 (406)
Q Consensus 201 ~~ILT~g~S~tV~~~L~~A~~~~~~f~ViV~EsrP~~eG~~~a~~L~~~GI~vt~I~-------D-sav~~~m-~-~vd~ 270 (406)
.+++|.|.+..+..++..+.+.| -+|++.+ |.+.|...+..+...|..+..++ | ..+-..+ + +...
T Consensus 72 ~i~~~~g~t~a~~~~~~~~~~~g--d~vl~~~--~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~ 147 (393)
T 2huf_A 72 TFCLSASGHGGMEATLCNLLEDG--DVILIGH--TGHWGDRSADMATRYGADVRVVKSKVGQSLSLDEIRDALLIHKPSV 147 (393)
T ss_dssp EEEESSCHHHHHHHHHHHHCCTT--CEEEEEE--SSHHHHHHHHHHHHTTCEEEEEECCTTCCCCHHHHHHHHHHHCCSE
T ss_pred EEEEcCcHHHHHHHHHHHHhCCC--CEEEEEC--CCcchHHHHHHHHHcCCeeEEEeCCCCCCCCHHHHHHHHhccCCcE
Confidence 46677777777777776664333 3566654 44445334444556798887775 2 1233333 3 4555
Q ss_pred EEEcceeEeeCCCcccccchHHHHHHHhhCCCceEE
Q 045642 271 VIVGVHAVMANGGVIAPAGLHVLALAAKKHDVPFVV 306 (406)
Q Consensus 271 VllGAdav~~nG~vvnk~GT~~lAl~Ak~~~vPv~V 306 (406)
|++. ..--..|.+.. -..++-+|+++++++++
T Consensus 148 v~~~-~~~nptG~~~~---l~~i~~~~~~~~~~li~ 179 (393)
T 2huf_A 148 LFLT-QGDSSTGVLQG---LEGVGALCHQHNCLLIV 179 (393)
T ss_dssp EEEE-SEETTTTEECC---CTTHHHHHHHTTCEEEE
T ss_pred EEEE-ccCCCccccCC---HHHHHHHHHHcCCEEEE
Confidence 5542 22222343333 23577788899988776
No 114
>1oi7_A Succinyl-COA synthetase alpha chain; SCS, ligase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.23A {Thermus thermophilus} SCOP: c.2.1.8 c.23.4.1
Probab=60.71 E-value=6.1 Score=37.43 Aligned_cols=106 Identities=13% Similarity=0.142 Sum_probs=68.0
Q ss_pred cCcEEEeccChHHHHHHHHHHHHcCCceEEEEecCCCCcchHHHHHHHHhCCCceEEEcchHHHHHhhcCCEEEEcceeE
Q 045642 199 QNEVILTLGHSKFVKEFLCAAKEKKRSFEVFIADGAPKFEGHILAKELDKKGLKAIVITDSAVFAMISRVNMVIVGVHAV 278 (406)
Q Consensus 199 ~g~~ILT~g~S~tV~~~L~~A~~~~~~f~ViV~EsrP~~eG~~~a~~L~~~GI~vt~I~Dsav~~~m~~vd~VllGAdav 278 (406)
+-|+++.+-....+...+..+.+.|.+.-|++++.-|..+-..+.+...+.|+ .++-.+.++.+-+...+.-..+..+
T Consensus 64 ~~Dv~Ii~vp~~~~~~~~~ea~~~Gi~~vVi~t~G~~~~~~~~l~~~a~~~gi--~vigPNc~Gii~~~~~~~~~~~~~~ 141 (288)
T 1oi7_A 64 EVDASIIFVPAPAAADAALEAAHAGIPLIVLITEGIPTLDMVRAVEEIKALGS--RLIGGNCPGIISAEETKIGIMPGHV 141 (288)
T ss_dssp CCSEEEECCCHHHHHHHHHHHHHTTCSEEEECCSCCCHHHHHHHHHHHHHHTC--EEEESSSCEEEETTTEEEESSCGGG
T ss_pred CCCEEEEecCHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHcCC--EEEeCCCCeEEcCCCceeEEcccCC
Confidence 45778788888999999999998887766666766665444566666777776 3554444444444332322222222
Q ss_pred eeCC--CcccccchHHHHHH--HhhCCCceEE
Q 045642 279 MANG--GVIAPAGLHVLALA--AKKHDVPFVV 306 (406)
Q Consensus 279 ~~nG--~vvnk~GT~~lAl~--Ak~~~vPv~V 306 (406)
..-| +++++.|+...+++ +...++.|--
T Consensus 142 ~~~G~va~vsqSG~l~~~~~~~~~~~g~G~s~ 173 (288)
T 1oi7_A 142 FKRGRVGIISRSGTLTYEAAAALSQAGLGTTT 173 (288)
T ss_dssp CCEEEEEEEESCHHHHHHHHHHHHHTTCCEEE
T ss_pred CCCCCEEEEECCHHHHHHHHHHHHhCCCCEEE
Confidence 3234 67899999987765 6667777653
No 115
>2rfv_A Methionine gamma-lyase; pyridoxal-5'-phosphate, PLP-dependent enzyme; HET: LLP; 1.35A {Citrobacter freundii} PDB: 1y4i_A* 3jwa_A* 3jw9_A* 3jwb_A* 3mkj_A*
Probab=60.67 E-value=66 Score=30.68 Aligned_cols=98 Identities=11% Similarity=0.093 Sum_probs=53.8
Q ss_pred cEEEeccChHHHHHHHHHHHHcCCceEEEEecCCCCcchH-HHHHH-HHhCCCceEEEcch---HHHHHhhcCCEEEEcc
Q 045642 201 EVILTLGHSKFVKEFLCAAKEKKRSFEVFIADGAPKFEGH-ILAKE-LDKKGLKAIVITDS---AVFAMISRVNMVIVGV 275 (406)
Q Consensus 201 ~~ILT~g~S~tV~~~L~~A~~~~~~f~ViV~EsrP~~eG~-~~a~~-L~~~GI~vt~I~Ds---av~~~m~~vd~VllGA 275 (406)
+.|++.+.+..+..++..+.+.| -+|++. .|.+.+. ..++. +...|+++..++-. .+...+..-.++|+-
T Consensus 81 ~~i~~~sG~~a~~~~l~~~~~~g--d~vi~~--~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~i~~~~~~v~~- 155 (398)
T 2rfv_A 81 AGLATASGISAITTTLLTLCQQG--DHIVSA--SAIYGCTHAFLSHSMPKFGINVRFVDAAKPEEIRAAMRPETKVVYI- 155 (398)
T ss_dssp EEEEESSHHHHHHHHHHHHCCTT--CEEEEE--SSSCHHHHHHHHTHHHHTTCEEEEECTTSHHHHHHHCCTTEEEEEE-
T ss_pred cEEEECCHHHHHHHHHHHHhCCC--CEEEEc--CCCcccHHHHHHHHHHHcCCEEEEeCCCCHHHHHHhcCCCCeEEEE-
Confidence 66777776666665666554333 355555 5666663 33333 36789999888632 222233221233332
Q ss_pred eeEee-CCCcccccchHHHHHHHhhCCCceEE
Q 045642 276 HAVMA-NGGVIAPAGLHVLALAAKKHDVPFVV 306 (406)
Q Consensus 276 dav~~-nG~vvnk~GT~~lAl~Ak~~~vPv~V 306 (406)
..+.. .|.+. . -..++-+|+++++++++
T Consensus 156 ~~~~nptG~~~-~--l~~i~~l~~~~~~~li~ 184 (398)
T 2rfv_A 156 ETPANPTLSLV-D--IETVAGIAHQQGALLVV 184 (398)
T ss_dssp ESSBTTTTBCC-C--HHHHHHHHHHTTCEEEE
T ss_pred ECCCCCCCccc-C--HHHHHHHHHHcCCEEEE
Confidence 22222 23333 2 45677889999998876
No 116
>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*
Probab=60.54 E-value=34 Score=32.05 Aligned_cols=110 Identities=15% Similarity=0.076 Sum_probs=61.9
Q ss_pred cCcEEEeccChHHHHHHHHHH-HHcCCceEEEEecCCCCcchHH---HHHHHH---hCCCceEEE--cc-hHHHHHhhcC
Q 045642 199 QNEVILTLGHSKFVKEFLCAA-KEKKRSFEVFIADGAPKFEGHI---LAKELD---KKGLKAIVI--TD-SAVFAMISRV 268 (406)
Q Consensus 199 ~g~~ILT~g~S~tV~~~L~~A-~~~~~~f~ViV~EsrP~~eG~~---~a~~L~---~~GI~vt~I--~D-sav~~~m~~v 268 (406)
.+.+||+.|.++.+=..|... .++ ..+|+++.-.+...... +.+.+. ..++.+... .| .++..++.++
T Consensus 26 ~~~~vlVtGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~ 103 (352)
T 1sb8_A 26 QPKVWLITGVAGFIGSNLLETLLKL--DQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNACAGV 103 (352)
T ss_dssp SCCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHHTTC
T ss_pred cCCeEEEECCCcHHHHHHHHHHHHC--CCEEEEEeCCCccchhhHHHHhhhcccccCCceEEEECCCCCHHHHHHHhcCC
Confidence 356788889888776666544 333 46788876554322111 111111 234433221 22 3456677777
Q ss_pred CEEEEcceeEeeC---CC-----cccccchHHHHHHHhhCCCceEEecCC
Q 045642 269 NMVIVGVHAVMAN---GG-----VIAPAGLHVLALAAKKHDVPFVVVAST 310 (406)
Q Consensus 269 d~VllGAdav~~n---G~-----vvnk~GT~~lAl~Ak~~~vPv~V~aes 310 (406)
|.||--|-..... .. -+|-.||..++-+|+..+++-+|.+.+
T Consensus 104 d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~SS 153 (352)
T 1sb8_A 104 DYVLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARDAKVQSFTYAAS 153 (352)
T ss_dssp SEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEE
T ss_pred CEEEECCcccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEecc
Confidence 7777655321100 00 146789999999999999875655444
No 117
>3f9t_A TDC, L-tyrosine decarboxylase MFNA; NP_247014.1, L-tyrosine decarboxylase MFNA (EC 4.1.1.25), ST genomics; HET: PLP; 2.11A {Methanocaldococcus jannaschii}
Probab=60.38 E-value=95 Score=28.78 Aligned_cols=100 Identities=14% Similarity=0.043 Sum_probs=56.6
Q ss_pred cCcEEEeccChHHHHHHHHHHHHc-----------CCceEEEEecCCCCcchHHHHHHHHhCCCceEEEcc--------h
Q 045642 199 QNEVILTLGHSKFVKEFLCAAKEK-----------KRSFEVFIADGAPKFEGHILAKELDKKGLKAIVITD--------S 259 (406)
Q Consensus 199 ~g~~ILT~g~S~tV~~~L~~A~~~-----------~~~f~ViV~EsrP~~eG~~~a~~L~~~GI~vt~I~D--------s 259 (406)
...+++|.|.+..+..++..+... ++.-+|++.+ |.+.+. ...+...|+++..++- .
T Consensus 86 ~~~i~~~~ggt~a~~~~~~~~~~~~~~~~~~~~~~~~gd~vl~~~--~~~~~~--~~~~~~~g~~~~~v~~~~~~~~d~~ 161 (397)
T 3f9t_A 86 DAYGHIVSGGTEANLMALRCIKNIWREKRRKGLSKNEHPKIIVPI--TAHFSF--EKGREMMDLEYIYAPIKEDYTIDEK 161 (397)
T ss_dssp TCEEEEESCHHHHHHHHHHHHHHHHHHHHHTTCCCCSSCEEEEET--TCCTHH--HHHHHHHTCEEEEECBCTTSSBCHH
T ss_pred CCCEEEecCcHHHHHHHHHHHHHHHHhhhhhcccCCCCeEEEECC--cchhHH--HHHHHHcCceeEEEeeCCCCcCCHH
Confidence 445688888887777777776543 1234566653 555553 2233345888888752 1
Q ss_pred HHHHHhhc--CCEEEEcceeEeeCCCcccccchHHHHHHHhhCCCceEE
Q 045642 260 AVFAMISR--VNMVIVGVHAVMANGGVIAPAGLHVLALAAKKHDVPFVV 306 (406)
Q Consensus 260 av~~~m~~--vd~VllGAdav~~nG~vvnk~GT~~lAl~Ak~~~vPv~V 306 (406)
.+-..+.+ ..+|++-. .--..|.+.. -..++-+|++|++++++
T Consensus 162 ~l~~~i~~~~~~~v~~~~-~~nptG~~~~---l~~i~~l~~~~~~~li~ 206 (397)
T 3f9t_A 162 FVKDAVEDYDVDGIIGIA-GTTELGTIDN---IEELSKIAKENNIYIHV 206 (397)
T ss_dssp HHHHHHHHSCCCEEEEEB-SCTTTCCBCC---HHHHHHHHHHHTCEEEE
T ss_pred HHHHHHhhcCCeEEEEEC-CCCCCCCCCC---HHHHHHHHHHhCCeEEE
Confidence 33334433 44444432 2233343322 34577788999998886
No 118
>1lc5_A COBD, L-threonine-O-3-phosphate decarboxylase; PLP-dependent decarboxylase cobalamin, lyase; 1.46A {Salmonella enterica} SCOP: c.67.1.1 PDB: 1lc7_A* 1lc8_A* 1lkc_A*
Probab=60.33 E-value=53 Score=30.69 Aligned_cols=98 Identities=11% Similarity=0.141 Sum_probs=52.7
Q ss_pred CcEEEeccChHHHHHHHHHHHHcCCceEEEEecCCCCcchHHHHHHHHhCCCceEEEcchH---------HHHHh-hcCC
Q 045642 200 NEVILTLGHSKFVKEFLCAAKEKKRSFEVFIADGAPKFEGHILAKELDKKGLKAIVITDSA---------VFAMI-SRVN 269 (406)
Q Consensus 200 g~~ILT~g~S~tV~~~L~~A~~~~~~f~ViV~EsrP~~eG~~~a~~L~~~GI~vt~I~Dsa---------v~~~m-~~vd 269 (406)
..+++|.|.+..+..++..+ .| -+|++. .|.+.|... .+...|.++..++-.. +...+ +++.
T Consensus 77 ~~v~~~~g~~~al~~~~~~~--~g--d~vl~~--~p~y~~~~~--~~~~~g~~~~~v~~~~~~~~~~l~~~~~~~~~~~~ 148 (364)
T 1lc5_A 77 SWILAGNGETESIFTVASGL--KP--RRAMIV--TPGFAEYGR--ALAQSGCEIRRWSLREADGWQLTDAILEALTPDLD 148 (364)
T ss_dssp GGEEEESSHHHHHHHHHHHH--CC--SEEEEE--ESCCTHHHH--HHHHTTCEEEEEECCGGGTTCCCTTHHHHCCTTCC
T ss_pred HHEEECCCHHHHHHHHHHHc--CC--CeEEEe--CCCcHHHHH--HHHHcCCeEEEEeCCcccccchhHHHHHhccCCCC
Confidence 45778877777777766666 44 355554 366766432 3345688877765221 11111 3344
Q ss_pred EEEEcceeEeeCCCcccccchHHHHHHHhhCCCceEE
Q 045642 270 MVIVGVHAVMANGGVIAPAGLHVLALAAKKHDVPFVV 306 (406)
Q Consensus 270 ~VllGAdav~~nG~vvnk~GT~~lAl~Ak~~~vPv~V 306 (406)
.|++ .+---+.|.+...-=-..++-.|+++++++++
T Consensus 149 ~v~i-~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~ 184 (364)
T 1lc5_A 149 CLFL-CTPNNPTGLLPERPLLQAIADRCKSLNINLIL 184 (364)
T ss_dssp EEEE-ESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEE
T ss_pred EEEE-eCCCCCCCCCCCHHHHHHHHHHhhhcCcEEEE
Confidence 4444 22111223333221124566788899998876
No 119
>1n8p_A Cystathionine gamma-lyase; three open alpha/beta structures; HET: PLP; 2.60A {Saccharomyces cerevisiae} SCOP: c.67.1.3
Probab=60.20 E-value=31 Score=33.37 Aligned_cols=98 Identities=16% Similarity=0.085 Sum_probs=52.7
Q ss_pred cEEEeccChHHHHHHHHHHHHcCCceEEEEecCCCCcchHHH-H-HHHHhCCCceEEEcc--hHHHHHhhcCCEEEEcce
Q 045642 201 EVILTLGHSKFVKEFLCAAKEKKRSFEVFIADGAPKFEGHIL-A-KELDKKGLKAIVITD--SAVFAMISRVNMVIVGVH 276 (406)
Q Consensus 201 ~~ILT~g~S~tV~~~L~~A~~~~~~f~ViV~EsrP~~eG~~~-a-~~L~~~GI~vt~I~D--sav~~~m~~vd~VllGAd 276 (406)
+.|++.|.+..+..++. ..+.| -+|++.. |.+.|... . ..+...|++++.++- ..+...+..-+++|+-..
T Consensus 72 ~~i~~~sGt~a~~~al~-~~~~g--d~Vi~~~--~~y~~~~~~~~~~~~~~G~~v~~v~~~d~~l~~~i~~~t~lv~~~~ 146 (393)
T 1n8p_A 72 YGLAFSSGSATTATILQ-SLPQG--SHAVSIG--DVYGGTHRYFTKVANAHGVETSFTNDLLNDLPQLIKENTKLVWIET 146 (393)
T ss_dssp EEEEESCHHHHHHHHHH-TSCSS--CEEEEES--SCCHHHHHHHHHTSTTTCSCCEEESSHHHHHHHHSCSSEEEEEECS
T ss_pred cEEEECChHHHHHHHHH-HcCCC--CEEEEeC--CCchHHHHHHHHHHHHcCcEEEEeCCChHHHHHhcccCceEEEEEC
Confidence 56666555666666666 44333 3566654 77776422 2 345678999999873 233333432223332111
Q ss_pred eEeeCCCcccccchHHHHHHHhhC----CCceEE
Q 045642 277 AVMANGGVIAPAGLHVLALAAKKH----DVPFVV 306 (406)
Q Consensus 277 av~~nG~vvnk~GT~~lAl~Ak~~----~vPv~V 306 (406)
.--..|.+. . -..++-+|+++ +++|++
T Consensus 147 ~~nptG~~~-~--l~~i~~la~~~~~~~~~~liv 177 (393)
T 1n8p_A 147 PTNPTLKVT-D--IQKVADLIKKHAAGQDVILVV 177 (393)
T ss_dssp SCTTTCCCC-C--HHHHHHHHHHHTTTTTCEEEE
T ss_pred CCCCcceec-C--HHHHHHHHHHhCCCCCCEEEE
Confidence 111223332 2 34577788888 888776
No 120
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=60.04 E-value=37 Score=28.76 Aligned_cols=86 Identities=13% Similarity=0.132 Sum_probs=49.6
Q ss_pred CcEEEeccChHHHHHHHHHHHHc-CCceEEEEecCCCCcchHHHHHHHHhCCCceEEE--cchHH-HHH--hhcCCEEEE
Q 045642 200 NEVILTLGHSKFVKEFLCAAKEK-KRSFEVFIADGAPKFEGHILAKELDKKGLKAIVI--TDSAV-FAM--ISRVNMVIV 273 (406)
Q Consensus 200 g~~ILT~g~S~tV~~~L~~A~~~-~~~f~ViV~EsrP~~eG~~~a~~L~~~GI~vt~I--~Dsav-~~~--m~~vd~Vll 273 (406)
++.|+.+|....=..+.+.+.+. | ++|++++..|. -+..+.+.|+.+.+. .|... ... +.++|.||+
T Consensus 39 ~~~v~IiG~G~~G~~~a~~L~~~~g--~~V~vid~~~~-----~~~~~~~~g~~~~~gd~~~~~~l~~~~~~~~ad~vi~ 111 (183)
T 3c85_A 39 HAQVLILGMGRIGTGAYDELRARYG--KISLGIEIREE-----AAQQHRSEGRNVISGDATDPDFWERILDTGHVKLVLL 111 (183)
T ss_dssp TCSEEEECCSHHHHHHHHHHHHHHC--SCEEEEESCHH-----HHHHHHHTTCCEEECCTTCHHHHHTBCSCCCCCEEEE
T ss_pred CCcEEEECCCHHHHHHHHHHHhccC--CeEEEEECCHH-----HHHHHHHCCCCEEEcCCCCHHHHHhccCCCCCCEEEE
Confidence 55788888876666666666544 5 46778877652 245567788876543 22121 122 445666666
Q ss_pred cceeEeeCCCcccccchHHHHHHHhhCC
Q 045642 274 GVHAVMANGGVIAPAGLHVLALAAKKHD 301 (406)
Q Consensus 274 GAdav~~nG~vvnk~GT~~lAl~Ak~~~ 301 (406)
.... ......++..|+..+
T Consensus 112 ~~~~---------~~~~~~~~~~~~~~~ 130 (183)
T 3c85_A 112 AMPH---------HQGNQTALEQLQRRN 130 (183)
T ss_dssp CCSS---------HHHHHHHHHHHHHTT
T ss_pred eCCC---------hHHHHHHHHHHHHHC
Confidence 4321 223445566777776
No 121
>3ftb_A Histidinol-phosphate aminotransferase; structural genomics, PSI, MCSG, protein structure initiative; 2.00A {Clostridium acetobutylicum} SCOP: c.67.1.0
Probab=60.04 E-value=32 Score=32.01 Aligned_cols=97 Identities=13% Similarity=0.202 Sum_probs=52.1
Q ss_pred cCcEEEeccChHHHHHHHHHHHHcCCceEEEEecCCCCcchHHHHHHHHhCCCceEEEcc--------hHHHHHhhcCCE
Q 045642 199 QNEVILTLGHSKFVKEFLCAAKEKKRSFEVFIADGAPKFEGHILAKELDKKGLKAIVITD--------SAVFAMISRVNM 270 (406)
Q Consensus 199 ~g~~ILT~g~S~tV~~~L~~A~~~~~~f~ViV~EsrP~~eG~~~a~~L~~~GI~vt~I~D--------sav~~~m~~vd~ 270 (406)
...+++|-|.+..+..++..+ -+|++. .|.+.+. ...+...|+++..++- ..+-..+.+ .+
T Consensus 78 ~~~i~~~~g~t~al~~~~~~~------d~vi~~--~~~~~~~--~~~~~~~g~~~~~~~~~~~~~~~~~~l~~~l~~-~~ 146 (361)
T 3ftb_A 78 DIGIVLGNGASEIIELSISLF------EKILII--VPSYAEY--EINAKKHGVSVVFSYLDENMCIDYEDIISKIDD-VD 146 (361)
T ss_dssp SCEEEEESSHHHHHHHHHTTC------SEEEEE--ESCCTHH--HHHHHHTTCEEEEEECCTTSCCCHHHHHHHTTT-CS
T ss_pred cceEEEcCCHHHHHHHHHHHc------CcEEEe--cCChHHH--HHHHHHcCCeEEEeecCcccCCCHHHHHHhccC-CC
Confidence 445677777666665555544 255555 3666663 2334556888887752 244444544 33
Q ss_pred EEEcceeEeeCCCcccccchHHHHHHHhhCCCceEE
Q 045642 271 VIVGVHAVMANGGVIAPAGLHVLALAAKKHDVPFVV 306 (406)
Q Consensus 271 VllGAdav~~nG~vvnk~GT~~lAl~Ak~~~vPv~V 306 (406)
+++=...--+.|.+...---..++-.|+.|++++++
T Consensus 147 ~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~ 182 (361)
T 3ftb_A 147 SVIIGNPNNPNGGLINKEKFIHVLKLAEEKKKTIII 182 (361)
T ss_dssp EEEEETTBTTTTBCCCHHHHHHHHHHHHHHTCEEEE
T ss_pred EEEEeCCCCCCCCCCCHHHHHHHHHHhhhcCCEEEE
Confidence 333221111223333222234466778899998887
No 122
>3cvj_A Putative phosphoheptose isomerase; rossman fold, 3-layer (ABA) sandwich, structural genomics, J center for structural genomics, JCSG; HET: MSE; 2.00A {Bacillus halodurans c-125}
Probab=60.03 E-value=66 Score=28.77 Aligned_cols=35 Identities=20% Similarity=0.152 Sum_probs=29.6
Q ss_pred hHHHHHHHHhCCCceEEEcchHHH-----------HHhhcCCEEEE
Q 045642 239 GHILAKELDKKGLKAIVITDSAVF-----------AMISRVNMVIV 273 (406)
Q Consensus 239 G~~~a~~L~~~GI~vt~I~Dsav~-----------~~m~~vd~Vll 273 (406)
-..+++.+++.|+++..|++..-. .+.+.+|.+|.
T Consensus 124 ~i~~~~~Ak~~G~~vI~IT~~~~s~~~~~~~~~g~~La~~aD~~l~ 169 (243)
T 3cvj_A 124 PVEMAIESRNIGAKVIAMTSMKHSQKVTSRHKSGKKLYEYADVVLD 169 (243)
T ss_dssp HHHHHHHHHHHTCEEEEEECHHHHHHSCCCSTTSCCGGGGCSEEEE
T ss_pred HHHHHHHHHHCCCEEEEEeCCcccccccccCCCcCcHHHhCCEEEE
Confidence 367889999999999999998776 66777998885
No 123
>2bkw_A Alanine-glyoxylate aminotransferase 1; analine-glyoxylate aminotransferase, pyridoxal-5-phosphate, SAD, glycolate pathway; HET: LLP; 2.57A {Saccharomyces cerevisiae} SCOP: c.67.1.3
Probab=59.90 E-value=80 Score=29.35 Aligned_cols=101 Identities=18% Similarity=0.151 Sum_probs=55.7
Q ss_pred CcEEEeccChHHHHHHHHHHHHc-CCceEEEEecCCCCcchHHHHHHHHhCCCceEEEcc---------hHHHHHhh--c
Q 045642 200 NEVILTLGHSKFVKEFLCAAKEK-KRSFEVFIADGAPKFEGHILAKELDKKGLKAIVITD---------SAVFAMIS--R 267 (406)
Q Consensus 200 g~~ILT~g~S~tV~~~L~~A~~~-~~~f~ViV~EsrP~~eG~~~a~~L~~~GI~vt~I~D---------sav~~~m~--~ 267 (406)
..+++|.|.+..+..++..+... ++.-+|++.++ |.+.+ .+...+...|.++..++- ..+-..+. +
T Consensus 60 ~~v~~~~g~t~al~~~~~~~~~~~~~gd~vlv~~~-~~~~~-~~~~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~l~~~~ 137 (385)
T 2bkw_A 60 QPFVLAGSGTLGWDIFASNFILSKAPNKNVLVVST-GTFSD-RFADCLRSYGAQVDVVRPLKIGESVPLELITEKLSQNS 137 (385)
T ss_dssp EEEEEESCTTHHHHHHHHHHSCTTCSCCEEEEECS-SHHHH-HHHHHHHHTTCEEEEECCSSTTSCCCHHHHHHHHHHSC
T ss_pred ceEEEcCchHHHHHHHHHHHhccCCCCCeEEEEcC-CcchH-HHHHHHHHcCCceEEEecCCCCCCCCHHHHHHHHhcCC
Confidence 35778888887777777666410 22336666654 22222 223456678988887752 12333343 3
Q ss_pred CCEEEEcceeEeeCCCcccccchHHHHHHHhhC--CCceEE
Q 045642 268 VNMVIVGVHAVMANGGVIAPAGLHVLALAAKKH--DVPFVV 306 (406)
Q Consensus 268 vd~VllGAdav~~nG~vvnk~GT~~lAl~Ak~~--~vPv~V 306 (406)
+..|++. ..-...|.+.. -..++-+|+++ ++++++
T Consensus 138 ~~~v~~~-~~~nptG~~~~---l~~i~~~~~~~~~~~~li~ 174 (385)
T 2bkw_A 138 YGAVTVT-HVDTSTAVLSD---LKAISQAIKQTSPETFFVV 174 (385)
T ss_dssp CSEEEEE-SEETTTTEECC---HHHHHHHHHHHCTTSEEEE
T ss_pred CCEEEEE-ccCCCcCeEcC---HHHHHHHHHhhCCCCEEEE
Confidence 4455442 22222344433 24677788888 887776
No 124
>2yvq_A Carbamoyl-phosphate synthase; conserved hypothetical protein, structural genomics, NPPSFA; 1.98A {Homo sapiens}
Probab=59.73 E-value=46 Score=27.79 Aligned_cols=92 Identities=13% Similarity=0.190 Sum_probs=59.5
Q ss_pred cCcEEEeccCh--HHHHHHHHHHHHcCCceEEEEecCCCCcchHHHHHHHHhCCCceEEEcc----------hHHHHHhh
Q 045642 199 QNEVILTLGHS--KFVKEFLCAAKEKKRSFEVFIADGAPKFEGHILAKELDKKGLKAIVITD----------SAVFAMIS 266 (406)
Q Consensus 199 ~g~~ILT~g~S--~tV~~~L~~A~~~~~~f~ViV~EsrP~~eG~~~a~~L~~~GI~vt~I~D----------sav~~~m~ 266 (406)
.| ++++.+.. .-+..+.+... ...|+++-++ -+++.|.+.||+|+.+.. ..+.-+++
T Consensus 25 ~g-vliSv~d~dK~~l~~~a~~l~--~lGf~i~AT~--------GTa~~L~~~Gi~v~~v~k~~egg~~~~~~~i~d~i~ 93 (143)
T 2yvq_A 25 KG-ILIGIQQSFRPRFLGVAEQLH--NEGFKLFATE--------ATSDWLNANNVPATPVAWPSQEGQNPSLSSIRKLIR 93 (143)
T ss_dssp SE-EEEECCGGGHHHHHHHHHHHH--TTTCEEEEEH--------HHHHHHHHTTCCCEEECCGGGC-----CBCHHHHHH
T ss_pred CC-EEEEecccchHHHHHHHHHHH--HCCCEEEECc--------hHHHHHHHcCCeEEEEEeccCCCcccccccHHHHHH
Confidence 46 66665542 22333444333 3578888773 358889999999999963 23555554
Q ss_pred --cCCEEEEcceeEeeCCCcccccchHHHHHHHhhCCCceEE
Q 045642 267 --RVNMVIVGVHAVMANGGVIAPAGLHVLALAAKKHDVPFVV 306 (406)
Q Consensus 267 --~vd~VllGAdav~~nG~vvnk~GT~~lAl~Ak~~~vPv~V 306 (406)
++|.||--.+ |+--...-.+.+=.+|=.|+||++-
T Consensus 94 ~g~i~lVInt~~-----~~~~~~~d~~~iRR~Av~~~IP~~T 130 (143)
T 2yvq_A 94 DGSIDLVINLPN-----NNTKFVHDNYVIRRTAVDSGIPLLT 130 (143)
T ss_dssp TTSCCEEEECCC-----CCGGGHHHHHHHHHHHHHTTCCEEC
T ss_pred CCCceEEEECCC-----CCCcCCccHHHHHHHHHHhCCCeEc
Confidence 4999997553 2222244667788889999999873
No 125
>3dxv_A Alpha-amino-epsilon-caprolactam racemase; fold-TYPE1, pyridoxal-5'-phosphate dependent racemase, pyrid phosphate, isomerase; HET: PLP; 2.21A {Achromobacter obae} PDB: 2zuk_A* 3dxw_A*
Probab=59.72 E-value=13 Score=36.23 Aligned_cols=140 Identities=13% Similarity=0.136 Sum_probs=69.5
Q ss_pred HHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHhcc--c-CcEEEeccChHHHHHHHHHHHHcCCceEEEEecCCCC
Q 045642 165 KKLKSELIKAVNELIE-----DINTCREGIAEQAMELIH--Q-NEVILTLGHSKFVKEFLCAAKEKKRSFEVFIADGAPK 236 (406)
Q Consensus 165 ~~~k~~l~~~i~~~~~-----e~~~~~~~I~~~a~~~I~--~-g~~ILT~g~S~tV~~~L~~A~~~~~~f~ViV~EsrP~ 236 (406)
+++++.+.+.++.+.. -.......+.+..+++.. . ..+++|.|.+..+..+|+.+..-..+-+|++.+. .
T Consensus 62 p~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~~~v~~~~ggsea~~~al~~~~~~~~~~~vi~~~~--~ 139 (439)
T 3dxv_A 62 PAIVAAVSAAAANPAGATILSASNAPAVTLAERLLASFPGEGTHKIWFGHSGSDANEAAYRAIVKATGRSGVIAFAG--A 139 (439)
T ss_dssp HHHHHHHHHHHHSCSCSCSSSSEEHHHHHHHHHHHHTTTCTTTEEEEEESSHHHHHHHHHHHHHHHHSCCEEEEETT--C
T ss_pred HHHHHHHHHHHHhccCccccccCCHHHHHHHHHHHHhCCCCCCCEEEEeCCHHHHHHHHHHHHHHHhCCCEEEEECC--C
Confidence 4556666665554310 011223344444445552 2 3678888888888888887643112235666643 3
Q ss_pred cchH-HHHHHHHhCCC------------ceEEEc------------c-hHHHHHhh---cCCEEEEcceeEeeCCCccc-
Q 045642 237 FEGH-ILAKELDKKGL------------KAIVIT------------D-SAVFAMIS---RVNMVIVGVHAVMANGGVIA- 286 (406)
Q Consensus 237 ~eG~-~~a~~L~~~GI------------~vt~I~------------D-sav~~~m~---~vd~VllGAdav~~nG~vvn- 286 (406)
+.|. ..+..+..... .+..++ | .++-..+. .-+..++=.+.+..+||.+.
T Consensus 140 yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~~vi~~p~~~~~G~~~~ 219 (439)
T 3dxv_A 140 YHGCTVGSMAFSGHSVQADAAKADGLILLPYPDPYRPYRNDPTGDAILTLLTEKLAAVPAGSIGAAFIEPIQSDGGLIVP 219 (439)
T ss_dssp CCCSSHHHHCC-------------CEEEECCCCSSSCBTTBTTSHHHHHHHHHHHHTSCTTCEEEEEECSSBSTTTSBCC
T ss_pred CCCCcHHHHhhcCCCchhhccccCCCCCCcEEcCCCcccccccHHHHHHHHHHHHHhcCCCCEEEEEEccccCCCCCccC
Confidence 3332 22222221111 112222 2 23444442 12233333355677766654
Q ss_pred ccc-hHHHHHHHhhCCCceEE
Q 045642 287 PAG-LHVLALAAKKHDVPFVV 306 (406)
Q Consensus 287 k~G-T~~lAl~Ak~~~vPv~V 306 (406)
.-+ --.++-+|++|++++++
T Consensus 220 ~~~~l~~l~~l~~~~~~~li~ 240 (439)
T 3dxv_A 220 PDGFLRKFADICRAHGILVVC 240 (439)
T ss_dssp CTTHHHHHHHHHHHTTCEEEE
T ss_pred CHHHHHHHHHHHHHcCCEEEE
Confidence 444 45677789999998775
No 126
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=59.67 E-value=16 Score=34.19 Aligned_cols=100 Identities=24% Similarity=0.111 Sum_probs=56.7
Q ss_pred cCcEEEeccChHHHHHHHHHHHHcCCceEEEEecCCCCcchHHHHHHHHhCCCceEEE--cc-hHHHHHhhcCCEEEEcc
Q 045642 199 QNEVILTLGHSKFVKEFLCAAKEKKRSFEVFIADGAPKFEGHILAKELDKKGLKAIVI--TD-SAVFAMISRVNMVIVGV 275 (406)
Q Consensus 199 ~g~~ILT~g~S~tV~~~L~~A~~~~~~f~ViV~EsrP~~eG~~~a~~L~~~GI~vt~I--~D-sav~~~m~~vd~VllGA 275 (406)
.+.+||+.|.++.+=..|.....+ +..+|+++...+.. .++.+... .| .++..++.++|.||--|
T Consensus 18 ~~~~vlVtGatG~iG~~l~~~L~~-~G~~V~~~~r~~~~-----------~~~~~~~~Dl~d~~~~~~~~~~~d~vih~A 85 (347)
T 4id9_A 18 GSHMILVTGSAGRVGRAVVAALRT-QGRTVRGFDLRPSG-----------TGGEEVVGSLEDGQALSDAIMGVSAVLHLG 85 (347)
T ss_dssp ---CEEEETTTSHHHHHHHHHHHH-TTCCEEEEESSCCS-----------SCCSEEESCTTCHHHHHHHHTTCSEEEECC
T ss_pred CCCEEEEECCCChHHHHHHHHHHh-CCCEEEEEeCCCCC-----------CCccEEecCcCCHHHHHHHHhCCCEEEECC
Confidence 355788888877766655544321 23677777655543 34443321 22 34556677777777654
Q ss_pred eeEeeCCC------cccccchHHHHHHHhhCCCceEEecCC
Q 045642 276 HAVMANGG------VIAPAGLHVLALAAKKHDVPFVVVAST 310 (406)
Q Consensus 276 dav~~nG~------vvnk~GT~~lAl~Ak~~~vPv~V~aes 310 (406)
-....+.. -+|-.||..++-+|+..+++-+|...+
T Consensus 86 ~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~V~~SS 126 (347)
T 4id9_A 86 AFMSWAPADRDRMFAVNVEGTRRLLDAASAAGVRRFVFASS 126 (347)
T ss_dssp CCCCSSGGGHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEE
T ss_pred cccCcchhhHHHHHHHHHHHHHHHHHHHHHcCCCeEEEECC
Confidence 32211111 135678999999999999865665544
No 127
>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}
Probab=59.55 E-value=12 Score=34.20 Aligned_cols=104 Identities=9% Similarity=0.049 Sum_probs=59.8
Q ss_pred EEEeccChHHHHHHHHHHHHcCCceEEEEecCCCCcchHHHHHHHHhCCCceEEE--cc-hHHHHHhhcCCEEEEcceeE
Q 045642 202 VILTLGHSKFVKEFLCAAKEKKRSFEVFIADGAPKFEGHILAKELDKKGLKAIVI--TD-SAVFAMISRVNMVIVGVHAV 278 (406)
Q Consensus 202 ~ILT~g~S~tV~~~L~~A~~~~~~f~ViV~EsrP~~eG~~~a~~L~~~GI~vt~I--~D-sav~~~m~~vd~VllGAdav 278 (406)
+||+.|.++.+=..+.....+....+|+++.-+|.. +..|...|+.+... .| .++..+++.+|.||.-|-..
T Consensus 2 ~ilVtGatG~iG~~l~~~L~~~~g~~V~~~~R~~~~-----~~~~~~~~v~~~~~D~~d~~~l~~~~~~~d~vi~~a~~~ 76 (289)
T 3e48_A 2 NIMLTGATGHLGTHITNQAIANHIDHFHIGVRNVEK-----VPDDWRGKVSVRQLDYFNQESMVEAFKGMDTVVFIPSII 76 (289)
T ss_dssp CEEEETTTSHHHHHHHHHHHHTTCTTEEEEESSGGG-----SCGGGBTTBEEEECCTTCHHHHHHHTTTCSEEEECCCCC
T ss_pred EEEEEcCCchHHHHHHHHHhhCCCCcEEEEECCHHH-----HHHhhhCCCEEEEcCCCCHHHHHHHHhCCCEEEEeCCCC
Confidence 477778777666555444323224566666544432 12234456554432 23 35566777777777654221
Q ss_pred eeCCCcccccchHHHHHHHhhCCCceEEecCCcc
Q 045642 279 MANGGVIAPAGLHVLALAAKKHDVPFVVVASTHE 312 (406)
Q Consensus 279 ~~nG~vvnk~GT~~lAl~Ak~~~vPv~V~aes~K 312 (406)
+..-.|..|+..++-+|+..+++-+|...++-
T Consensus 77 --~~~~~~~~~~~~l~~aa~~~gv~~iv~~Ss~~ 108 (289)
T 3e48_A 77 --HPSFKRIPEVENLVYAAKQSGVAHIIFIGYYA 108 (289)
T ss_dssp --CSHHHHHHHHHHHHHHHHHTTCCEEEEEEESC
T ss_pred --ccchhhHHHHHHHHHHHHHcCCCEEEEEcccC
Confidence 11123457888899999999988777766653
No 128
>2hj0_A Putative citrate lyase, ALFA subunit; alpha beta protein., structural genomics, PSI-2, protein STR initiative; HET: CIT; 2.70A {Streptococcus mutans}
Probab=59.41 E-value=77 Score=32.47 Aligned_cols=115 Identities=23% Similarity=0.169 Sum_probs=66.1
Q ss_pred HHHHHHHHHHhc------ccCcEEEe-cc-ChHHHHHHHHHH-HHcCCceEEEEecCCCCcch-HHHHHHHHhCCCceE-
Q 045642 186 REGIAEQAMELI------HQNEVILT-LG-HSKFVKEFLCAA-KEKKRSFEVFIADGAPKFEG-HILAKELDKKGLKAI- 254 (406)
Q Consensus 186 ~~~I~~~a~~~I------~~g~~ILT-~g-~S~tV~~~L~~A-~~~~~~f~ViV~EsrP~~eG-~~~a~~L~~~GI~vt- 254 (406)
...|+++++++| .+|.++=+ +| -+..|..+|..- .+.+-.=++ ...| ......|-++|.-..
T Consensus 253 ~~~IA~~~a~~i~~~g~l~dG~~lqlGiG~ip~aV~~~L~~~~~~l~i~se~-------g~~g~~~~~~~lieaG~i~~~ 325 (519)
T 2hj0_A 253 ELLIAEYAAKVITSSPYYKEGFSFQTGTGGASLAVTRFMREQMIKDDIKANF-------ALGGITNAMVELLEEGLVDKI 325 (519)
T ss_dssp HHHHHHHHHHHHHTSTTCSTTCEEECCSSHHHHHHHHHHHHHHHHSCCCEEE-------ECSEECHHHHHHHHTTSEEEE
T ss_pred HHHHHHHHHHHHHhcccCCCCCEEEeccChHHHHHHHHHhhhcccceeeece-------eccCcChhHHHHHHCCCCCCC
Confidence 456788888875 99977665 55 355577777666 433333222 0001 011334555553221
Q ss_pred --------------------EEcchHHHH--------HhhcCCEEEEcceeEeeCCCccccc-----------chHHHHH
Q 045642 255 --------------------VITDSAVFA--------MISRVNMVIVGVHAVMANGGVIAPA-----------GLHVLAL 295 (406)
Q Consensus 255 --------------------~I~Dsav~~--------~m~~vd~VllGAdav~~nG~vvnk~-----------GT~~lAl 295 (406)
.+.+++..| ++.+.|..|+||=-|-.+|.+-+-. |...++.
T Consensus 326 ~~~~~f~~G~~~~~~~n~~~~~~~~~~~~~n~~n~p~~i~~ldv~ilga~eVD~~Gnvn~~~~~gg~~~~G~GG~~D~~~ 405 (519)
T 2hj0_A 326 LDVQDFDHPSAVSLDRNAEKHYEIDANMYASPLSKGSVINQLDICVLSALEVDTNFNVNVMTGSDGVIRGASGGHCDTAF 405 (519)
T ss_dssp EESEESSHHHHHHHHHTTTTEEECCHHHHHCSSSSCCGGGGCSEEEECCSEECTTCCEECSBCTTCCBCCBCTTHHHHHH
T ss_pred ccccccccchHHHHHhCcHhhEEEchHHhhccCCCHHHhccCCeeeeeeEEEccCCceeeeeccCCeEecccccHHHHhh
Confidence 222334444 5678999999998888777776644 3445566
Q ss_pred HHhhCCCceEEecCCc
Q 045642 296 AAKKHDVPFVVVASTH 311 (406)
Q Consensus 296 ~Ak~~~vPv~V~aes~ 311 (406)
-|+. ++++.++.
T Consensus 406 gA~~----~ii~~~~t 417 (519)
T 2hj0_A 406 AAKM----SLVISPLV 417 (519)
T ss_dssp HSSE----EEEECCSE
T ss_pred ccCe----EEEEEccc
Confidence 6663 56666543
No 129
>3kgw_A Alanine-glyoxylate aminotransferase; AAH25799.1, putative aminotransferase, structural genomics, center for structural genomics, JCSG; HET: PLP; 1.65A {Mus musculus} SCOP: c.67.1.3 PDB: 3kgx_A 3imz_A* 3r9a_A* 1h0c_A* 1j04_A*
Probab=59.41 E-value=70 Score=29.81 Aligned_cols=97 Identities=12% Similarity=0.092 Sum_probs=57.9
Q ss_pred EEEeccChHHHHHHHHHHHHcCCceEEEEecCCCCcchHHHHHHHHhCCCceEEEc-------c-hHHHHHhh--cCCEE
Q 045642 202 VILTLGHSKFVKEFLCAAKEKKRSFEVFIADGAPKFEGHILAKELDKKGLKAIVIT-------D-SAVFAMIS--RVNMV 271 (406)
Q Consensus 202 ~ILT~g~S~tV~~~L~~A~~~~~~f~ViV~EsrP~~eG~~~a~~L~~~GI~vt~I~-------D-sav~~~m~--~vd~V 271 (406)
+++|.|.+..+..++..+.+. .-+|++.. |.+-|..+...+...|.++..++ | .++-..+. ++..|
T Consensus 77 v~~~~gg~~al~~~~~~~~~~--gd~vl~~~--~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~v 152 (393)
T 3kgw_A 77 LVVSGSGHCAMETALFNLLEP--GDSFLTGT--NGIWGMRAAEIADRIGARVHQMIKKPGEHYTLQEVEEGLAQHKPVLL 152 (393)
T ss_dssp EEESCCTTTHHHHHHHHHCCT--TCEEEEEE--SSHHHHHHHHHHHHTTCEEEEEECCTTCCCCHHHHHHHHHHHCCSEE
T ss_pred EEEeCCcHHHHHHHHHhcCCC--CCEEEEEe--CCchhHHHHHHHHHcCCceEEEeCCCCCCCCHHHHHHHHhhCCCcEE
Confidence 678888888887777777533 34566663 44444445666777898888775 1 23333343 45555
Q ss_pred EEcceeEeeCCCcccccchHHHHHHHhhCCCceEE
Q 045642 272 IVGVHAVMANGGVIAPAGLHVLALAAKKHDVPFVV 306 (406)
Q Consensus 272 llGAdav~~nG~vvnk~GT~~lAl~Ak~~~vPv~V 306 (406)
++- ..--..|.+.. --.++-+|+.|++++++
T Consensus 153 ~~~-~~~nptG~~~~---l~~i~~l~~~~~~~li~ 183 (393)
T 3kgw_A 153 FLV-HGESSTGVVQP---LDGFGELCHRYQCLLLV 183 (393)
T ss_dssp EEE-SEETTTTEECC---CTTHHHHHHHTTCEEEE
T ss_pred EEe-ccCCcchhhcc---HHHHHHHHHHcCCEEEE
Confidence 443 22222343333 22577788999998876
No 130
>3ndn_A O-succinylhomoserine sulfhydrylase; seattle structural genomics center for infectious disease, S mycobacterium, PLP, schiff base; HET: LLP; 1.85A {Mycobacterium tuberculosis}
Probab=59.24 E-value=48 Score=32.43 Aligned_cols=99 Identities=12% Similarity=0.065 Sum_probs=54.8
Q ss_pred CcEEEeccChHHHHHHHHHHHHcCCceEEEEecCCCCcchH-HHH-HHHHhCCCceEEEcch---HHHHHhh-cCCEEEE
Q 045642 200 NEVILTLGHSKFVKEFLCAAKEKKRSFEVFIADGAPKFEGH-ILA-KELDKKGLKAIVITDS---AVFAMIS-RVNMVIV 273 (406)
Q Consensus 200 g~~ILT~g~S~tV~~~L~~A~~~~~~f~ViV~EsrP~~eG~-~~a-~~L~~~GI~vt~I~Ds---av~~~m~-~vd~Vll 273 (406)
.+.++|-|.+..+...|..+.+.| -+|++. .|.+.|. ... ..+...|+.++.++-. ++...+. +...|++
T Consensus 97 ~~~~~~~sG~~Ai~~al~~l~~~G--d~Vi~~--~~~y~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~ai~~~t~~v~l 172 (414)
T 3ndn_A 97 PAAFATASGMAAVFTSLGALLGAG--DRLVAA--RSLFGSCFVVCSEILPRWGVQTVFVDGDDLSQWERALSVPTQAVFF 172 (414)
T ss_dssp SEEEEESSHHHHHHHHHHTTCCTT--CEEEEE--SCCCHHHHHHHHTHHHHTTCEEEEECTTCHHHHHHHTSSCCSEEEE
T ss_pred CcEEEECCHHHHHHHHHHHHhCCC--CEEEEc--CCccchHHHHHHHHHHHcCcEEEEeCCCCHHHHHHhcCCCCeEEEE
Confidence 356666666666555555554333 355554 4566663 333 3356789999998632 3333343 3445544
Q ss_pred cceeEeeCCCcccccchHHHHHHHhhCCCceEE
Q 045642 274 GVHAVMANGGVIAPAGLHVLALAAKKHDVPFVV 306 (406)
Q Consensus 274 GAdav~~nG~vvnk~GT~~lAl~Ak~~~vPv~V 306 (406)
+.+..-.|.+.. --.++-+|+.+++++++
T Consensus 173 --e~p~NptG~~~~--l~~i~~la~~~g~~liv 201 (414)
T 3ndn_A 173 --ETPSNPMQSLVD--IAAVTELAHAAGAKVVL 201 (414)
T ss_dssp --ESSCTTTCCCCC--HHHHHHHHHHTTCEEEE
T ss_pred --ECCCCCCCcccc--HHHHHHHHHHcCCEEEE
Confidence 222222222222 34677889999998887
No 131
>4ds3_A Phosphoribosylglycinamide formyltransferase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.85A {Brucella melitensis BV}
Probab=59.21 E-value=27 Score=31.41 Aligned_cols=71 Identities=17% Similarity=0.243 Sum_probs=42.7
Q ss_pred EEEeccChHHHHHHHHHHHHcCCceEEEEec-CCCCcchHHHHHHHHhCCCceEEEcc----------hHHHHHhh--cC
Q 045642 202 VILTLGHSKFVKEFLCAAKEKKRSFEVFIAD-GAPKFEGHILAKELDKKGLKAIVITD----------SAVFAMIS--RV 268 (406)
Q Consensus 202 ~ILT~g~S~tV~~~L~~A~~~~~~f~ViV~E-srP~~eG~~~a~~L~~~GI~vt~I~D----------sav~~~m~--~v 268 (406)
.||.-|..+....+|....+.+-+++|..+- .+|...|...| .+.||++..+.. ..+...++ ++
T Consensus 11 ~vl~SG~gsnl~all~~~~~~~l~~~I~~Visn~~~a~~l~~A---~~~gIp~~~~~~~~~~~r~~~d~~~~~~l~~~~~ 87 (209)
T 4ds3_A 11 VIFISGGGSNMEALIRAAQAPGFPAEIVAVFSDKAEAGGLAKA---EAAGIATQVFKRKDFASKEAHEDAILAALDVLKP 87 (209)
T ss_dssp EEEESSCCHHHHHHHHHHTSTTCSEEEEEEEESCTTCTHHHHH---HHTTCCEEECCGGGSSSHHHHHHHHHHHHHHHCC
T ss_pred EEEEECCcHHHHHHHHHHHcCCCCcEEEEEEECCcccHHHHHH---HHcCCCEEEeCccccCCHHHHHHHHHHHHHhcCC
Confidence 4666666666666666554222346655443 47777775433 467999998752 34444554 47
Q ss_pred CEEEEcc
Q 045642 269 NMVIVGV 275 (406)
Q Consensus 269 d~VllGA 275 (406)
|.+++.+
T Consensus 88 Dliv~ag 94 (209)
T 4ds3_A 88 DIICLAG 94 (209)
T ss_dssp SEEEESS
T ss_pred CEEEEec
Confidence 8777754
No 132
>2q7w_A Aspartate aminotransferase; mechanism-based inhibitor, PLP, sadta, PH dependence; HET: KST PSZ PMP GOL; 1.40A {Escherichia coli} SCOP: c.67.1.1 PDB: 2qa3_A* 2qb2_A* 2qb3_A* 2qbt_A* 3qn6_A* 3pa9_A* 1aaw_A* 1amq_A* 1ams_A* 1arg_A* 1amr_A* 1art_A* 1asa_A* 1asd_A* 1ase_A* 1asl_A* 1asm_A* 1asn_A* 1c9c_A* 1cq6_A* ...
Probab=59.15 E-value=73 Score=29.95 Aligned_cols=104 Identities=12% Similarity=0.070 Sum_probs=54.2
Q ss_pred cCcEEE--eccChHHHHHHHHHHHHcCCceEEEEecCCCCcchHHHHHHHHhCCCceEEEcc----------hHHHHHhh
Q 045642 199 QNEVIL--TLGHSKFVKEFLCAAKEKKRSFEVFIADGAPKFEGHILAKELDKKGLKAIVITD----------SAVFAMIS 266 (406)
Q Consensus 199 ~g~~IL--T~g~S~tV~~~L~~A~~~~~~f~ViV~EsrP~~eG~~~a~~L~~~GI~vt~I~D----------sav~~~m~ 266 (406)
...+++ |.|.+..+..+++.+..-+..-+|++. .|.+.|... .+...|.++..++- ..+-..+.
T Consensus 92 ~~~v~~~~~~g~~~a~~~~~~~~~~~~~gd~Vl~~--~p~y~~~~~--~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~ 167 (396)
T 2q7w_A 92 DKRARTAQTPGGTGALRVAADFLAKNTSVKRVWVS--NPSWPNHKS--VFNSAGLEVREYAYYDAENHTLDFDALINSLN 167 (396)
T ss_dssp TTCEEEEEESHHHHHHHHHHHHHHHHSCCCEEEEE--ESCCTHHHH--HHHHTTCEEEEEECEETTTTEECHHHHHHHHT
T ss_pred cccEEEEecccchhhHHHHHHHHHHhCCCCEEEEc--CCCchhHHH--HHHHcCCceEEEecccCCCCCcCHHHHHHHHH
Confidence 445665 877777777666554321122356654 466766433 23446887776642 13333343
Q ss_pred c---CCEEEEcceeEeeCCCcccccchHHHHHHHhhCCCceEE
Q 045642 267 R---VNMVIVGVHAVMANGGVIAPAGLHVLALAAKKHDVPFVV 306 (406)
Q Consensus 267 ~---vd~VllGAdav~~nG~vvnk~GT~~lAl~Ak~~~vPv~V 306 (406)
+ -+++++-+..--+.|.+...-=-..++-.|+++++.+++
T Consensus 168 ~~~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~ 210 (396)
T 2q7w_A 168 EAQAGDVVLFHGCCHNPTGIDPTLEQWQTLAQLSVEKGWLPLF 210 (396)
T ss_dssp TCCTTCEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEE
T ss_pred hCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEE
Confidence 3 134444332222233333322223477788889988776
No 133
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=58.88 E-value=19 Score=35.72 Aligned_cols=93 Identities=16% Similarity=0.197 Sum_probs=60.4
Q ss_pred CcEEEeccChHHHHHHHHHHHHcCCceEEEEecCCCCcchHHHHHHHHhCCCceEEEcchHHHHH-----hhcCCEEEEc
Q 045642 200 NEVILTLGHSKFVKEFLCAAKEKKRSFEVFIADGAPKFEGHILAKELDKKGLKAIVITDSAVFAM-----ISRVNMVIVG 274 (406)
Q Consensus 200 g~~ILT~g~S~tV~~~L~~A~~~~~~f~ViV~EsrP~~eG~~~a~~L~~~GI~vt~I~Dsav~~~-----m~~vd~VllG 274 (406)
++.|+.+|+.+.=..+.+.+.+.| ..|+|+|..|. .++.+.+.|+++.+- |+.=..+ +.+++.||+.
T Consensus 4 ~~~viIiG~Gr~G~~va~~L~~~g--~~vvvId~d~~-----~v~~~~~~g~~vi~G-Dat~~~~L~~agi~~A~~viv~ 75 (413)
T 3l9w_A 4 GMRVIIAGFGRFGQITGRLLLSSG--VKMVVLDHDPD-----HIETLRKFGMKVFYG-DATRMDLLESAGAAKAEVLINA 75 (413)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTT--CCEEEEECCHH-----HHHHHHHTTCCCEES-CTTCHHHHHHTTTTTCSEEEEC
T ss_pred CCeEEEECCCHHHHHHHHHHHHCC--CCEEEEECCHH-----HHHHHHhCCCeEEEc-CCCCHHHHHhcCCCccCEEEEC
Confidence 455777888776666666665444 56788888764 356677889987554 4333222 3567888776
Q ss_pred ceeEeeCCCcccccchHHHHHHHhhCCCc--eEEecC
Q 045642 275 VHAVMANGGVIAPAGLHVLALAAKKHDVP--FVVVAS 309 (406)
Q Consensus 275 Adav~~nG~vvnk~GT~~lAl~Ak~~~vP--v~V~ae 309 (406)
.+. ..-+..+++.||.++.. +++-+.
T Consensus 76 ~~~---------~~~n~~i~~~ar~~~p~~~Iiara~ 103 (413)
T 3l9w_A 76 IDD---------PQTNLQLTEMVKEHFPHLQIIARAR 103 (413)
T ss_dssp CSS---------HHHHHHHHHHHHHHCTTCEEEEEES
T ss_pred CCC---------hHHHHHHHHHHHHhCCCCeEEEEEC
Confidence 542 45567788899987754 555443
No 134
>1nri_A Hypothetical protein HI0754; structural genomics, haemophilus influ PSI, protein structure initiative, midwest center for struc genomics; 1.90A {Haemophilus influenzae} SCOP: c.80.1.3
Probab=58.66 E-value=98 Score=29.02 Aligned_cols=64 Identities=14% Similarity=0.031 Sum_probs=41.0
Q ss_pred EEEecCCCCc--chHHHHHHHHhCCCceEEEcchHHHHHhhcCCEEEEc---ceeEeeCCCcccccchHHH
Q 045642 228 VFIADGAPKF--EGHILAKELDKKGLKAIVITDSAVFAMISRVNMVIVG---VHAVMANGGVIAPAGLHVL 293 (406)
Q Consensus 228 ViV~EsrP~~--eG~~~a~~L~~~GI~vt~I~Dsav~~~m~~vd~VllG---Adav~~nG~vvnk~GT~~l 293 (406)
|+|.=|..+. +-...++.+++.|+++..|++..-+.+.+.+|.+|.- .+.+ .|+.-.+.|+.+.
T Consensus 143 vvI~IS~SG~T~~vi~al~~Ak~~Ga~~IaIT~~~~S~La~~AD~~I~~~~g~E~~--~~st~~~s~ta~~ 211 (306)
T 1nri_A 143 VLVGIAASGRTPYVIAGLQYAKSLGALTISIASNPKSEMAEIADIAIETIVGPEIL--TGSSRLKSGTAQK 211 (306)
T ss_dssp EEEEECTTSCCHHHHHHHHHHHHHTCEEEEEESSTTCHHHHHSSEEEECCCCSCSS--TTCTTTHHHHHHH
T ss_pred EEEEEECCCCCHHHHHHHHHHHHCCCEEEEEECCCCChHHHhCCEEEEcCCCCccc--cCcccchhHHHHH
Confidence 3343344333 3357788888999999999998777777779988853 2322 2333446666443
No 135
>2cb1_A O-acetyl homoserine sulfhydrylase; PLP enzyme, lyase, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: LLP; 2.0A {Thermus thermophilus}
Probab=58.61 E-value=47 Score=32.04 Aligned_cols=102 Identities=25% Similarity=0.144 Sum_probs=56.6
Q ss_pred hcccCcEEEeccChHHHHHHHHHHHHcCCceEEEEecCCCCcchH-HHHHH-HHhCCCceEEEcch--HHHHHhh-cCCE
Q 045642 196 LIHQNEVILTLGHSKFVKEFLCAAKEKKRSFEVFIADGAPKFEGH-ILAKE-LDKKGLKAIVITDS--AVFAMIS-RVNM 270 (406)
Q Consensus 196 ~I~~g~~ILT~g~S~tV~~~L~~A~~~~~~f~ViV~EsrP~~eG~-~~a~~-L~~~GI~vt~I~Ds--av~~~m~-~vd~ 270 (406)
++...++++|-|.+..+...+..+.+.| -+|++.+ |.+.+. ..... +...|+++..++-. .+-..+. +...
T Consensus 68 ~~g~~~~~~~~~gt~a~~~al~~l~~~g--d~vi~~~--~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~l~~~i~~~~~~ 143 (412)
T 2cb1_A 68 LEGALEAVVLASGQAATFAALLALLRPG--DEVVAAK--GLFGQTIGLFGQVLSLMGVTVRYVDPEPEAVREALSAKTRA 143 (412)
T ss_dssp HHTCSEEEEESSHHHHHHHHHHTTCCTT--CEEEEET--TCCHHHHHHHHHTTTTTTCEEEEECSSHHHHHHHCCTTEEE
T ss_pred HhCCCcEEEECCHHHHHHHHHHHHhCCC--CEEEEeC--CCchhHHHHHHHHHHHcCCEEEEECCCHHHHHHHhccCCeE
Confidence 3433467888777766666666554333 3566654 566552 33332 56689999888642 2223332 2333
Q ss_pred EEEcceeEe-eCCCcccccchHHHHHHHhhCCCceEE
Q 045642 271 VIVGVHAVM-ANGGVIAPAGLHVLALAAKKHDVPFVV 306 (406)
Q Consensus 271 VllGAdav~-~nG~vvnk~GT~~lAl~Ak~~~vPv~V 306 (406)
|++ +.+. ..|.+. . -..++-+|+++++++++
T Consensus 144 v~~--~~~~n~~G~~~-~--l~~i~~l~~~~~~~li~ 175 (412)
T 2cb1_A 144 VFV--ETVANPALLVP-D--LEALATLAEEAGVALVV 175 (412)
T ss_dssp EEE--ESSCTTTCCCC-C--HHHHHHHHHHHTCEEEE
T ss_pred EEE--eCCCCCCcccc-c--HHHHHHHHHHcCCEEEE
Confidence 333 2222 233333 2 45677889999998876
No 136
>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*
Probab=58.47 E-value=63 Score=28.46 Aligned_cols=109 Identities=10% Similarity=0.126 Sum_probs=64.1
Q ss_pred cCcEEEeccChHHHHHHHHHHHHcCCceEEEEecCCCCcchHHHHHHHHhCCCceEEE-cc----hHHHHHhh-------
Q 045642 199 QNEVILTLGHSKFVKEFLCAAKEKKRSFEVFIADGAPKFEGHILAKELDKKGLKAIVI-TD----SAVFAMIS------- 266 (406)
Q Consensus 199 ~g~~ILT~g~S~tV~~~L~~A~~~~~~f~ViV~EsrP~~eG~~~a~~L~~~GI~vt~I-~D----sav~~~m~------- 266 (406)
.+.+||+.|.++.+=..+..... .+..+|+++...+ .....++++|...|-.+.++ .| .++..++.
T Consensus 10 ~~~~vlVtGasggiG~~la~~l~-~~G~~V~~~~r~~-~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 87 (255)
T 1fmc_A 10 DGKCAIITGAGAGIGKEIAITFA-TAGASVVVSDINA-DAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAISKLG 87 (255)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHH-TTTCEEEEEESCH-HHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEECCccHHHHHHHHHHH-HCCCEEEEEcCCH-HHHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHhcC
Confidence 46788888988887766655442 2346788876543 22345667777777666654 33 23444444
Q ss_pred cCCEEEEcceeEeeCCCc------------ccccchHHHHHHHh----hCCCceEEecCC
Q 045642 267 RVNMVIVGVHAVMANGGV------------IAPAGLHVLALAAK----KHDVPFVVVAST 310 (406)
Q Consensus 267 ~vd~VllGAdav~~nG~v------------vnk~GT~~lAl~Ak----~~~vPv~V~aes 310 (406)
++|.||--|-. ...+.. +|-.|++.++.++. ..+...+|...+
T Consensus 88 ~~d~vi~~Ag~-~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS 146 (255)
T 1fmc_A 88 KVDILVNNAGG-GGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITS 146 (255)
T ss_dssp SCCEEEECCCC-CCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECC
T ss_pred CCCEEEECCCC-CCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcc
Confidence 68888776532 222211 46678877776653 345555554433
No 137
>3i4j_A Aminotransferase, class III; structural GENOMICS,NYSGXRC, target 11246C, deino radiodurans, pyridoxal phosphate, transfe PSI-2; 1.70A {Deinococcus radiodurans}
Probab=58.40 E-value=29 Score=33.61 Aligned_cols=140 Identities=13% Similarity=0.161 Sum_probs=64.3
Q ss_pred HHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHhcc--cCcEEEeccChHHHHHHHHHHHHc------CCceEEEEe
Q 045642 165 KKLKSELIKAVNELI-----EDINTCREGIAEQAMELIH--QNEVILTLGHSKFVKEFLCAAKEK------KRSFEVFIA 231 (406)
Q Consensus 165 ~~~k~~l~~~i~~~~-----~e~~~~~~~I~~~a~~~I~--~g~~ILT~g~S~tV~~~L~~A~~~------~~~f~ViV~ 231 (406)
+++++.+.+.++.+. .-.......+++..+++.. ...+++|.|.+..+...|+.+... ..+-+|++.
T Consensus 48 p~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~~v~~~~gg~ea~~~al~~~~~~~~~~g~~~~~~vi~~ 127 (430)
T 3i4j_A 48 AEVGERMAAQAARLPFVHGSQFSSDVLEEYAGRLARFVGLPTFRFWAVSGGSEATESAVKLARQYHVERGEPGRFKVITR 127 (430)
T ss_dssp HHHHHHHHHHHHHCCCCCTTTCEEHHHHHHHHHHHHHTTCTTCEEEEESSHHHHHHHHHHHHHHHHHHTTCTTCCEEEEE
T ss_pred HHHHHHHHHHHHhcccccccccCCHHHHHHHHHHHHhCCCCCCEEEEeCcHHHHHHHHHHHHHHHHHhcCCCCCcEEEEE
Confidence 456666666655432 0011122333333344442 346788888888888888777532 123456654
Q ss_pred cCCCCcchHHH-HHHHHhCCC------------ceEEEcc-----------hHHHHHhhc---CCEEEEcceeEee-CCC
Q 045642 232 DGAPKFEGHIL-AKELDKKGL------------KAIVITD-----------SAVFAMISR---VNMVIVGVHAVMA-NGG 283 (406)
Q Consensus 232 EsrP~~eG~~~-a~~L~~~GI------------~vt~I~D-----------sav~~~m~~---vd~VllGAdav~~-nG~ 283 (406)
+ |.+.|... +..+..... .+..++. .++-..+.+ -+..++=++.+.. +||
T Consensus 128 ~--~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~~~vi~~p~~~~~~G 205 (430)
T 3i4j_A 128 V--PSYHGASLGSLAASGMGARRELYTPLMRPEAWPKLPKPDPARNGAEDAEGLRALLEREGPETVAAFMAEPVVGASDA 205 (430)
T ss_dssp T--TC-------------------------CGGGSCEECCCCTTSCHHHHHTHHHHHHHHHCGGGEEEEEECSSCCGGGT
T ss_pred e--CCcCCCCcccccccCccccccccCCcCCCCCceEcCCCcccchhhHHHHHHHHHHHhcCCCCEEEEEEcCcccCcCC
Confidence 3 34444321 222221100 3333432 344444542 1222333344444 455
Q ss_pred ccc-ccc-hHHHHHHHhhCCCceEE
Q 045642 284 VIA-PAG-LHVLALAAKKHDVPFVV 306 (406)
Q Consensus 284 vvn-k~G-T~~lAl~Ak~~~vPv~V 306 (406)
.+. .-+ -..++-+|++|++.+++
T Consensus 206 ~~~~~~~~l~~l~~l~~~~~~~li~ 230 (430)
T 3i4j_A 206 ALAPAPGYYERVRDICDEAGIIFIA 230 (430)
T ss_dssp TCCCCTTHHHHHHHHHHHHTCEEEE
T ss_pred cccCCHHHHHHHHHHHHHcCCEEEE
Confidence 433 334 24567789999997775
No 138
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=58.24 E-value=30 Score=32.86 Aligned_cols=67 Identities=16% Similarity=0.184 Sum_probs=41.5
Q ss_pred CceEEEEecCCCCcchHHHHHHHHhCCCceEEEcchHHHHHh-hcCCEEEEcceeEeeCCCcccccchHHHHHHHhhCCC
Q 045642 224 RSFEVFIADGAPKFEGHILAKELDKKGLKAIVITDSAVFAMI-SRVNMVIVGVHAVMANGGVIAPAGLHVLALAAKKHDV 302 (406)
Q Consensus 224 ~~f~ViV~EsrP~~eG~~~a~~L~~~GI~vt~I~Dsav~~~m-~~vd~VllGAdav~~nG~vvnk~GT~~lAl~Ak~~~v 302 (406)
+.++|.+.|.++... +...|.+.||++.+-.+.. .+. ..+|.||++.- |-. ..+.-..|++.|+
T Consensus 27 ~G~~V~~~D~~~~~~---~~~~L~~~gi~v~~g~~~~--~l~~~~~d~vV~Spg-i~~---------~~p~~~~a~~~gi 91 (326)
T 3eag_A 27 AGFEVSGCDAKMYPP---MSTQLEALGIDVYEGFDAA--QLDEFKADVYVIGNV-AKR---------GMDVVEAILNLGL 91 (326)
T ss_dssp TTCEEEEEESSCCTT---HHHHHHHTTCEEEESCCGG--GGGSCCCSEEEECTT-CCT---------TCHHHHHHHHTTC
T ss_pred CCCEEEEEcCCCCcH---HHHHHHhCCCEEECCCCHH--HcCCCCCCEEEECCC-cCC---------CCHHHHHHHHcCC
Confidence 457899999887643 3567888999887654432 223 36888887642 211 1234445666666
Q ss_pred ceE
Q 045642 303 PFV 305 (406)
Q Consensus 303 Pv~ 305 (406)
||+
T Consensus 92 ~v~ 94 (326)
T 3eag_A 92 PYI 94 (326)
T ss_dssp CEE
T ss_pred cEE
Confidence 655
No 139
>3ab8_A Putative uncharacterized protein TTHA0350; tandem-type universal stress protein, unknown function; HET: ATP; 1.70A {Thermus thermophilus} PDB: 3ab7_A*
Probab=58.23 E-value=51 Score=29.46 Aligned_cols=98 Identities=13% Similarity=0.129 Sum_probs=53.8
Q ss_pred EEeccChHHHHHHHHHHH----HcCCceEEEEecCCCCc-c--hHHHHHHHHhCCCceEEE--cch---HHHHHhhcCCE
Q 045642 203 ILTLGHSKFVKEFLCAAK----EKKRSFEVFIADGAPKF-E--GHILAKELDKKGLKAIVI--TDS---AVFAMISRVNM 270 (406)
Q Consensus 203 ILT~g~S~tV~~~L~~A~----~~~~~f~ViV~EsrP~~-e--G~~~a~~L~~~GI~vt~I--~Ds---av~~~m~~vd~ 270 (406)
++-+..|..-.+.|..|. ..+..++++-+...+.. + -..++..|.+.|++++.. ... ++..+..+.|.
T Consensus 158 lv~~d~s~~~~~al~~a~~la~~~~a~l~ll~v~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~g~~~~~i~~~a~~~dl 237 (268)
T 3ab8_A 158 LLGYDASESAVRALHALAPLARALGLGVRVVSVHEDPARAEAWALEAEAYLRDHGVEASALVLGGDAADHLLRLQGPGDL 237 (268)
T ss_dssp EEECCSCHHHHHHHHHHHHHHHHHTCCEEEEEECSSHHHHHHHHHHHHHHHHHTTCCEEEEEECSCHHHHHHHHCCTTEE
T ss_pred EEEECCCHHHHHHHHHHHHhhhcCCCEEEEEEEcCcHHHHHHHHHHHHHHHHHcCCceEEEEeCCChHHHHHHHHHhCCE
Confidence 334666665555555443 24556666644332211 1 135677788889987753 222 23333344599
Q ss_pred EEEcceeEeeCCCcccccchHHHHHHHhhCCCceEEe
Q 045642 271 VIVGVHAVMANGGVIAPAGLHVLALAAKKHDVPFVVV 307 (406)
Q Consensus 271 VllGAdav~~nG~vvnk~GT~~lAl~Ak~~~vPv~V~ 307 (406)
+++|+ . + .+- -.|+..-.+ .++..+||+++
T Consensus 238 iV~G~-~-~-~~~---~~Gs~~~~v-l~~~~~pvlvv 267 (268)
T 3ab8_A 238 LALGA-P-V-RRL---VFGSTAERV-IRNAQGPVLTA 267 (268)
T ss_dssp EEEEC-C-C-SCC---SSCCHHHHH-HHHCSSCEEEE
T ss_pred EEECC-c-c-ccc---EeccHHHHH-HhcCCCCEEEe
Confidence 99999 1 1 111 246554444 45568999986
No 140
>3tqx_A 2-amino-3-ketobutyrate coenzyme A ligase; energy metabolism, transferase; HET: PLP; 2.30A {Coxiella burnetii}
Probab=58.21 E-value=80 Score=29.60 Aligned_cols=102 Identities=10% Similarity=0.053 Sum_probs=55.4
Q ss_pred HhcccCcEEEeccChHHHHHHHHHHHHcCCceEEEEecCCCCcchHHHHHHHHhCCCceEEEcc---hHHHHHhh-----
Q 045642 195 ELIHQNEVILTLGHSKFVKEFLCAAKEKKRSFEVFIADGAPKFEGHILAKELDKKGLKAIVITD---SAVFAMIS----- 266 (406)
Q Consensus 195 ~~I~~g~~ILT~g~S~tV~~~L~~A~~~~~~f~ViV~EsrP~~eG~~~a~~L~~~GI~vt~I~D---sav~~~m~----- 266 (406)
+++...+.|++.+.+..+..++.... ++.-+|++. .|.+.+. ...+...|.++..++. ..+-..+.
T Consensus 99 ~~~~~~~~i~~~sGt~a~~~~l~~~~--~~gd~v~~~--~~~~~~~--~~~~~~~g~~~~~~~~~d~~~l~~~l~~~~~~ 172 (399)
T 3tqx_A 99 EFLGTDDTILYSSCFDANGGLFETLL--GPEDAIISD--ELNHASI--IDGIRLCKAQRYRYKNNAMGDLEAKLKEADEK 172 (399)
T ss_dssp HHHTCSEEEEESCHHHHHHTTHHHHC--CTTCEEEEE--TTCCHHH--HHHHHSCCSEEEEECTTCTTHHHHHHHHHHTT
T ss_pred HHHCCCcEEEECchHHHHHHHHHHhc--CCCCEEEEC--CcccHHH--HHHHHHcCCceeEeCCCCHHHHHHHHHhhhcc
Confidence 34444456666555666655555443 333345543 4555553 3345667888887752 23444444
Q ss_pred --cCCEEEEcceeEeeCCCcccccchHHHHHHHhhCCCceEE
Q 045642 267 --RVNMVIVGVHAVMANGGVIAPAGLHVLALAAKKHDVPFVV 306 (406)
Q Consensus 267 --~vd~VllGAdav~~nG~vvnk~GT~~lAl~Ak~~~vPv~V 306 (406)
++..|++.. .--..|.+.. -..++-+|+++++++++
T Consensus 173 ~~~~~~v~~~~-~~nptG~~~~---l~~i~~l~~~~~~~li~ 210 (399)
T 3tqx_A 173 GARFKLIATDG-VFSMDGIIAD---LKSICDLADKYNALVMV 210 (399)
T ss_dssp TCSSEEEEEES-EETTTTEECC---HHHHHHHHHHTTCEEEE
T ss_pred CCCceEEEEeC-CCCCCCCcCC---HHHHHHHHHHcCCEEEE
Confidence 333444332 2233343333 45678889999998876
No 141
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=57.58 E-value=70 Score=30.48 Aligned_cols=93 Identities=20% Similarity=0.180 Sum_probs=56.0
Q ss_pred cCcEEEeccChH---HHHHHHHHHHHc---CCceEEEEecCCCCcchHHHHHHHHhCCCceEEEcc-hHHHHHhhcCCEE
Q 045642 199 QNEVILTLGHSK---FVKEFLCAAKEK---KRSFEVFIADGAPKFEGHILAKELDKKGLKAIVITD-SAVFAMISRVNMV 271 (406)
Q Consensus 199 ~g~~ILT~g~S~---tV~~~L~~A~~~---~~~f~ViV~EsrP~~eG~~~a~~L~~~GI~vt~I~D-sav~~~m~~vd~V 271 (406)
+..+||++|.|. .+...+..|..+ ..++.|++.-++... ..+.+.+.+.++++.+..- .-+..+|..+|.|
T Consensus 179 ~~~~ilv~gGs~g~~~~~~~~~~al~~l~~~~~~~vi~~~G~~~~--~~~~~~~~~~~~~~~v~~f~~dm~~~l~~aDlv 256 (365)
T 3s2u_A 179 RRVNLLVLGGSLGAEPLNKLLPEALAQVPLEIRPAIRHQAGRQHA--EITAERYRTVAVEADVAPFISDMAAAYAWADLV 256 (365)
T ss_dssp SCCEEEECCTTTTCSHHHHHHHHHHHTSCTTTCCEEEEECCTTTH--HHHHHHHHHTTCCCEEESCCSCHHHHHHHCSEE
T ss_pred CCcEEEEECCcCCccccchhhHHHHHhcccccceEEEEecCcccc--ccccceecccccccccccchhhhhhhhccceEE
Confidence 345788887653 444555555432 334566655333222 3556677888888877642 2377788999987
Q ss_pred EEcceeEeeCCCcccccchHHHHHHHhhCCCceEEe
Q 045642 272 IVGVHAVMANGGVIAPAGLHVLALAAKKHDVPFVVV 307 (406)
Q Consensus 272 llGAdav~~nG~vvnk~GT~~lAl~Ak~~~vPv~V~ 307 (406)
|. +.|...++- |-..|+|++++
T Consensus 257 I~-------------raG~~Tv~E-~~a~G~P~Ili 278 (365)
T 3s2u_A 257 IC-------------RAGALTVSE-LTAAGLPAFLV 278 (365)
T ss_dssp EE-------------CCCHHHHHH-HHHHTCCEEEC
T ss_pred Ee-------------cCCcchHHH-HHHhCCCeEEe
Confidence 63 345444443 34579999875
No 142
>1xr4_A Putative citrate lyase alpha chain/citrate-ACP TR; the midwest center for structural genomics, MCSG, structural genomics; 2.37A {Salmonella typhimurium} SCOP: c.124.1.2 c.124.1.2
Probab=57.22 E-value=68 Score=32.78 Aligned_cols=124 Identities=14% Similarity=0.090 Sum_probs=73.2
Q ss_pred HHHHHHh--cccCcEEEeccChH----HHHHHHHHHHHcC-CceEEEEecCCCCcc-------------------hHHHH
Q 045642 190 AEQAMEL--IHQNEVILTLGHSK----FVKEFLCAAKEKK-RSFEVFIADGAPKFE-------------------GHILA 243 (406)
Q Consensus 190 ~~~a~~~--I~~g~~ILT~g~S~----tV~~~L~~A~~~~-~~f~ViV~EsrP~~e-------------------G~~~a 243 (406)
++.|+++ |++|++|...+... .+.++.+++.+++ ++++++-.-..+... |..+.
T Consensus 49 aeEAv~~~~IkdG~tV~~gg~~G~P~~Li~AL~~r~~~~g~kdLtli~~s~g~~~~~l~~~i~~g~v~r~~~~~~g~~~r 128 (509)
T 1xr4_A 49 LEEAIRRSGLKNGMTISFHHAFRGGDKVVNMVMAKLAEMGFRDLTLASSSLIDAHWPLIEHIKNGVVRQIYTSGLRGKLG 128 (509)
T ss_dssp HHHHHHHTTCCTTCEEEECCTTGGGCCHHHHHHHHHHHTTCCSEEEEESCCCGGGTTHHHHHHTTSEEEEEESBCCHHHH
T ss_pred HHHHhcCCCCCCcCEEEECCccCCHHHHHHHHHHHHHhcCCcceEEEecCCcCcchhHHHHhhcCceEEEEEccCCHHHH
Confidence 4566778 99999999866543 2333344444333 577877542222111 22222
Q ss_pred HHHHh--CCCceEEEcchHHHHHhh----cCCEEEEcceeEeeCCCccccc-----chHHHHHHHhhCCCceEEecCCcc
Q 045642 244 KELDK--KGLKAIVITDSAVFAMIS----RVNMVIVGVHAVMANGGVIAPA-----GLHVLALAAKKHDVPFVVVASTHE 312 (406)
Q Consensus 244 ~~L~~--~GI~vt~I~Dsav~~~m~----~vd~VllGAdav~~nG~vvnk~-----GT~~lAl~Ak~~~vPv~V~aes~K 312 (406)
+...+ ..++..+.+-....+++. .+|..++.|...-.+|.+.-.- ++...+.++...+.-|++ +.-+
T Consensus 129 ~~i~~G~~~~P~~~s~~~g~p~ll~~~~l~iDVAlI~as~aD~~Gnls~~~g~~~~~s~~~~~a~a~~A~~VIa--EVn~ 206 (509)
T 1xr4_A 129 EEISAGLMENPVQIHSHGGRVKLIQSGELNIDVAFLGVPCCDEFGNANGFSGKSRCGSLGYAQVDAQYAKCVVL--LTEE 206 (509)
T ss_dssp HHHHHTCCSSCEEECCHHHHHHHHHTTSSCCSEEEEEESEEETTCCEESSSSSSCCCCCTTHHHHHHHCSEEEE--EESC
T ss_pred HHHHcCCCcCCeeEeccCCHHHHHhcCCCCceEEEEEeccCCCCceEEEeCCCCcccchHHHHHHHhhCCEEEE--EeCC
Confidence 32221 346777775344666664 5899999999999999887432 355556666666665555 3334
Q ss_pred ccc
Q 045642 313 LCS 315 (406)
Q Consensus 313 ~~~ 315 (406)
..|
T Consensus 207 ~vP 209 (509)
T 1xr4_A 207 WVE 209 (509)
T ss_dssp EEC
T ss_pred CCC
Confidence 444
No 143
>3a2b_A Serine palmitoyltransferase; vitamin B6-dependent enzyme fold type I, acyltransferase, PY phosphate; HET: PLP; 2.30A {Sphingobacterium multivorum}
Probab=57.18 E-value=1.3e+02 Score=28.30 Aligned_cols=111 Identities=16% Similarity=0.082 Sum_probs=60.1
Q ss_pred HHHHHHHHHhcccCcEEEeccChHHHHHHHHHHHHcCCceEEEEecCCCCcchHHHHHHHHhCCCceEEEcc---hHHHH
Q 045642 187 EGIAEQAMELIHQNEVILTLGHSKFVKEFLCAAKEKKRSFEVFIADGAPKFEGHILAKELDKKGLKAIVITD---SAVFA 263 (406)
Q Consensus 187 ~~I~~~a~~~I~~g~~ILT~g~S~tV~~~L~~A~~~~~~f~ViV~EsrP~~eG~~~a~~L~~~GI~vt~I~D---sav~~ 263 (406)
+.+.+..+++....++++|.|.+..+..++..+.+ +.-+|++. .|.+.+... .+...|.++..++- ..+-.
T Consensus 91 ~~l~~~la~~~g~~~v~~~~ggt~a~~~~~~~~~~--~gd~V~~~--~p~~~~~~~--~~~~~g~~~~~v~~~d~~~l~~ 164 (398)
T 3a2b_A 91 VELEEKLSAYVGKEAAILFSTGFQSNLGPLSCLMG--RNDYILLD--ERDHASIID--GSRLSFSKVIKYGHNNMEDLRA 164 (398)
T ss_dssp HHHHHHHHHHHTCSEEEEESSHHHHHHHHHHHSSC--TTCEEEEE--TTCCHHHHH--HHHHSSSEEEEECTTCHHHHHH
T ss_pred HHHHHHHHHHhCCCcEEEECCHHHHHHHHHHHHhC--CCCEEEEC--CccCHHHHH--HHHHcCCceEEeCCCCHHHHHH
Confidence 44444444555445678887777666666666542 33345444 456655432 34557888887752 23334
Q ss_pred Hhhc----CCEEEEcceeEeeCCCcccccchHHHHHHHhhCCCceEE
Q 045642 264 MISR----VNMVIVGVHAVMANGGVIAPAGLHVLALAAKKHDVPFVV 306 (406)
Q Consensus 264 ~m~~----vd~VllGAdav~~nG~vvnk~GT~~lAl~Ak~~~vPv~V 306 (406)
.+.+ -.++|+-...--+.|.+.. -..++-+|+++++++++
T Consensus 165 ~l~~~~~~~~~~v~~~~~~nptG~~~~---~~~l~~~~~~~~~~li~ 208 (398)
T 3a2b_A 165 KLSRLPEDSAKLICTDGIFSMEGDIVN---LPELTSIANEFDAAVMV 208 (398)
T ss_dssp HHHTSCSSSCEEEEEESBCTTTCCBCC---HHHHHHHHHHHTCEEEE
T ss_pred HHHhhccCCceEEEEeCCCCCCCCccC---HHHHHHHHHHcCcEEEE
Confidence 4443 1233332211122243332 35677788999988776
No 144
>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*
Probab=57.17 E-value=18 Score=32.44 Aligned_cols=108 Identities=14% Similarity=0.214 Sum_probs=67.2
Q ss_pred cCcEEEeccChHHHHHHHHHHHHcCCceEEEEecCCCCcchHHHHHHHHhCCCceEEE-cc----hHHHHHhh-------
Q 045642 199 QNEVILTLGHSKFVKEFLCAAKEKKRSFEVFIADGAPKFEGHILAKELDKKGLKAIVI-TD----SAVFAMIS------- 266 (406)
Q Consensus 199 ~g~~ILT~g~S~tV~~~L~~A~~~~~~f~ViV~EsrP~~eG~~~a~~L~~~GI~vt~I-~D----sav~~~m~------- 266 (406)
.+.++|+.|.++-+=..+..... .+..+|+++..++......+++++.+.|.++..+ .| ..+..++.
T Consensus 3 ~~k~~lVTGas~gIG~~ia~~l~-~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 81 (246)
T 3osu_A 3 MTKSALVTGASRGIGRSIALQLA-EEGYNVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQANVADADEVKAMIKEVVSQFG 81 (246)
T ss_dssp CSCEEEETTCSSHHHHHHHHHHH-HTTCEEEEEESSCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEECCCChHHHHHHHHHH-HCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 35678888888877666655431 2346788877766555667888888888877655 33 23444444
Q ss_pred cCCEEEEcceeEeeCCCc-------------ccccchHHHHHHH----hhCCCceEEec
Q 045642 267 RVNMVIVGVHAVMANGGV-------------IAPAGLHVLALAA----KKHDVPFVVVA 308 (406)
Q Consensus 267 ~vd~VllGAdav~~nG~v-------------vnk~GT~~lAl~A----k~~~vPv~V~a 308 (406)
++|.+|--|- +...+.+ +|-.|++.++.++ +..+...+|..
T Consensus 82 ~id~lv~nAg-~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~i 139 (246)
T 3osu_A 82 SLDVLVNNAG-ITRDNLLMRMKEQEWDDVIDTNLKGVFNCIQKATPQMLRQRSGAIINL 139 (246)
T ss_dssp CCCEEEECCC-CCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEE
T ss_pred CCCEEEECCC-CCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEE
Confidence 6788777653 3333321 3677888888776 44455545443
No 145
>3loq_A Universal stress protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: AMP; 2.32A {Archaeoglobus fulgidus}
Probab=57.03 E-value=99 Score=28.01 Aligned_cols=103 Identities=16% Similarity=0.265 Sum_probs=58.8
Q ss_pred EEEeccChHHHHHHHHHHH----HcCCceEEEEecCCCCcch--HHHHHHHHhCCCceEEE--cchHHHHH---hh--cC
Q 045642 202 VILTLGHSKFVKEFLCAAK----EKKRSFEVFIADGAPKFEG--HILAKELDKKGLKAIVI--TDSAVFAM---IS--RV 268 (406)
Q Consensus 202 ~ILT~g~S~tV~~~L~~A~----~~~~~f~ViV~EsrP~~eG--~~~a~~L~~~GI~vt~I--~Dsav~~~---m~--~v 268 (406)
+++-+..|..-.+.|..|. ..+..+.|+-+...+..+- ..+.+.|.+.|+++... .......+ .. ++
T Consensus 173 Ilv~~d~s~~s~~al~~a~~la~~~~~~l~ll~v~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~g~~~~~I~~~a~~~~~ 252 (294)
T 3loq_A 173 VLVAYDFSKWADRALEYAKFVVKKTGGELHIIHVSEDGDKTADLRVMEEVIGAEGIEVHVHIESGTPHKAILAKREEINA 252 (294)
T ss_dssp EEEECCSSHHHHHHHHHHHHHHHHHTCEEEEEEECSSSCCHHHHHHHHHHHHHTTCCEEEEEECSCHHHHHHHHHHHTTC
T ss_pred EEEEECCCHHHHHHHHHHHHHhhhcCCEEEEEEEccCchHHHHHHHHHHHHHHcCCcEEEEEecCCHHHHHHHHHHhcCc
Confidence 3444666665555555443 3456677665543332222 35677888899885543 33323333 23 69
Q ss_pred CEEEEcceeEeeCCCccc-ccchHHHHHHHhhCCCceEEec
Q 045642 269 NMVIVGVHAVMANGGVIA-PAGLHVLALAAKKHDVPFVVVA 308 (406)
Q Consensus 269 d~VllGAdav~~nG~vvn-k~GT~~lAl~Ak~~~vPv~V~a 308 (406)
|.+++|+.. .|++-. -.|+..-. +.++..+||+++=
T Consensus 253 dLlV~G~~~---~~~~~~~~~Gs~~~~-vl~~~~~pvLvv~ 289 (294)
T 3loq_A 253 TTIFMGSRG---AGSVMTMILGSTSES-VIRRSPVPVFVCK 289 (294)
T ss_dssp SEEEEECCC---CSCHHHHHHHCHHHH-HHHHCSSCEEEEC
T ss_pred CEEEEeCCC---CCCccceeeCcHHHH-HHhcCCCCEEEEC
Confidence 999999975 333333 24554443 4467789999974
No 146
>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*
Probab=57.01 E-value=30 Score=31.18 Aligned_cols=99 Identities=15% Similarity=0.162 Sum_probs=57.4
Q ss_pred EEeccChHHHHHHHHHHHHcC-CceEEEEecCCCCcchHHHHHHHHhCCCceEEE--cc-hHHHHHhhcCCEEEEcceeE
Q 045642 203 ILTLGHSKFVKEFLCAAKEKK-RSFEVFIADGAPKFEGHILAKELDKKGLKAIVI--TD-SAVFAMISRVNMVIVGVHAV 278 (406)
Q Consensus 203 ILT~g~S~tV~~~L~~A~~~~-~~f~ViV~EsrP~~eG~~~a~~L~~~GI~vt~I--~D-sav~~~m~~vd~VllGAdav 278 (406)
||+.|.++.+=..|.....+. ..++|+++.-.|... ..|...++.+... .| .++..+++.+|.|+--|-..
T Consensus 2 ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~-----~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~a~~~ 76 (286)
T 2zcu_A 2 IAITGATGQLGHYVIESLMKTVPASQIVAIVRNPAKA-----QALAAQGITVRQADYGDEAALTSALQGVEKLLLISSSE 76 (286)
T ss_dssp EEEESTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTC-----HHHHHTTCEEEECCTTCHHHHHHHTTTCSEEEECC---
T ss_pred EEEEcCCchHHHHHHHHHHhhCCCceEEEEEcChHhh-----hhhhcCCCeEEEcCCCCHHHHHHHHhCCCEEEEeCCCC
Confidence 677788777766665554221 256788776555421 2344456654322 22 45667788888887654321
Q ss_pred eeCCCcccccchHHHHHHHhhCCCceEEecCC
Q 045642 279 MANGGVIAPAGLHVLALAAKKHDVPFVVVAST 310 (406)
Q Consensus 279 ~~nG~vvnk~GT~~lAl~Ak~~~vPv~V~aes 310 (406)
.+ .|-.|+..+.-+|+..+++-+|...+
T Consensus 77 -~~---~~~~~~~~l~~a~~~~~~~~~v~~Ss 104 (286)
T 2zcu_A 77 -VG---QRAPQHRNVINAAKAAGVKFIAYTSL 104 (286)
T ss_dssp ---------CHHHHHHHHHHHHTCCEEEEEEE
T ss_pred -ch---HHHHHHHHHHHHHHHcCCCEEEEECC
Confidence 11 35678999988898888876665544
No 147
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=56.64 E-value=29 Score=30.19 Aligned_cols=101 Identities=21% Similarity=0.138 Sum_probs=60.7
Q ss_pred cEEEeccChHHHHHHHHHHHHcCCceEEEEecCCCCcchHHHHHHHHhCCCceEEE-cc----hHHHHHhhcCCEEEEcc
Q 045642 201 EVILTLGHSKFVKEFLCAAKEKKRSFEVFIADGAPKFEGHILAKELDKKGLKAIVI-TD----SAVFAMISRVNMVIVGV 275 (406)
Q Consensus 201 ~~ILT~g~S~tV~~~L~~A~~~~~~f~ViV~EsrP~~eG~~~a~~L~~~GI~vt~I-~D----sav~~~m~~vd~VllGA 275 (406)
.+||..|.++.+=..|..... .+..+|+++.-+|.... .+ ..++ .++ .| ..+..+++++|.||--|
T Consensus 5 ~~ilItGatG~iG~~l~~~L~-~~g~~V~~~~r~~~~~~-----~~-~~~~--~~~~~Dl~d~~~~~~~~~~~d~vi~~a 75 (227)
T 3dhn_A 5 KKIVLIGASGFVGSALLNEAL-NRGFEVTAVVRHPEKIK-----IE-NEHL--KVKKADVSSLDEVCEVCKGADAVISAF 75 (227)
T ss_dssp CEEEEETCCHHHHHHHHHHHH-TTTCEEEEECSCGGGCC-----CC-CTTE--EEECCCTTCHHHHHHHHTTCSEEEECC
T ss_pred CEEEEEcCCchHHHHHHHHHH-HCCCEEEEEEcCcccch-----hc-cCce--EEEEecCCCHHHHHHHhcCCCEEEEeC
Confidence 578888988887776665552 23478888866543211 00 0222 222 22 34566777888888766
Q ss_pred eeEeeCCC--cccccchHHHHHHHhhCCCceEEecCC
Q 045642 276 HAVMANGG--VIAPAGLHVLALAAKKHDVPFVVVAST 310 (406)
Q Consensus 276 dav~~nG~--vvnk~GT~~lAl~Ak~~~vPv~V~aes 310 (406)
-....+.. -+|..|+..+.-+|+..+++-+|...+
T Consensus 76 ~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss 112 (227)
T 3dhn_A 76 NPGWNNPDIYDETIKVYLTIIDGVKKAGVNRFLMVGG 112 (227)
T ss_dssp CC------CCSHHHHHHHHHHHHHHHTTCSEEEEECC
T ss_pred cCCCCChhHHHHHHHHHHHHHHHHHHhCCCEEEEeCC
Confidence 33222211 126789999999999999876666554
No 148
>1c7n_A Cystalysin; transferase, aminotransferase, pyridoxal phosphate; HET: PLP; 1.90A {Treponema denticola} SCOP: c.67.1.3 PDB: 1c7o_A*
Probab=56.61 E-value=62 Score=30.56 Aligned_cols=116 Identities=14% Similarity=0.076 Sum_probs=59.9
Q ss_pred HHHHHHHHHHHHh----cccCcEEEeccChHHHHHHHHHHHHcCCceEEEEecCCCCcchHHHHHHHHhCCCceEEEcc-
Q 045642 184 TCREGIAEQAMEL----IHQNEVILTLGHSKFVKEFLCAAKEKKRSFEVFIADGAPKFEGHILAKELDKKGLKAIVITD- 258 (406)
Q Consensus 184 ~~~~~I~~~a~~~----I~~g~~ILT~g~S~tV~~~L~~A~~~~~~f~ViV~EsrP~~eG~~~a~~L~~~GI~vt~I~D- 258 (406)
..++.+++...++ +....+++|.|.+..+..++....+.| -+|++ ..|.+.|...+ +...|.++..++-
T Consensus 70 ~l~~~la~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~g--d~vl~--~~p~~~~~~~~--~~~~g~~~~~~~~~ 143 (399)
T 1c7n_A 70 EYKKTVKKWMKDRHQWDIQTDWIINTAGVVPAVFNAVREFTKPG--DGVII--ITPVYYPFFMA--IKNQERKIIECELL 143 (399)
T ss_dssp HHHHHHHHHHHHHHCCCCCGGGEEEESSHHHHHHHHHHHHCCTT--CEEEE--CSSCCTHHHHH--HHTTTCEEEECCCE
T ss_pred HHHHHHHHHHHHHhCCCCChhhEEEcCCHHHHHHHHHHHhcCCC--CEEEE--cCCCcHhHHHH--HHHcCCEEEecccc
Confidence 3444555443332 334467788777777777776654223 35555 45777774332 3456777665532
Q ss_pred ----------hHHHHHhh--cCCEEEEcceeEeeCCCcccccchHHHHHHHhhCCCceEE
Q 045642 259 ----------SAVFAMIS--RVNMVIVGVHAVMANGGVIAPAGLHVLALAAKKHDVPFVV 306 (406)
Q Consensus 259 ----------sav~~~m~--~vd~VllGAdav~~nG~vvnk~GT~~lAl~Ak~~~vPv~V 306 (406)
..+-..+. ++..|++ ...--+.|.+...-=-..++-.|+++++++++
T Consensus 144 ~~~g~~~~d~~~l~~~l~~~~~~~v~~-~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~ 202 (399)
T 1c7n_A 144 EKDGYYTIDFQKLEKLSKDKNNKALLF-CSPHNPVGRVWKKDELQKIKDIVLKSDLMLWS 202 (399)
T ss_dssp EETTEEECCHHHHHHHHTCTTEEEEEE-ESSBTTTTBCCCHHHHHHHHHHHHHSSCEEEE
T ss_pred cCCCCEEEcHHHHHHHhccCCCcEEEE-cCCCCCCCcCcCHHHHHHHHHHHHHcCCEEEE
Confidence 12333333 3334443 22211223333222234566788999998876
No 149
>2ay1_A Aroat, aromatic amino acid aminotransferase; HET: PLP AHC; 2.20A {Paracoccus denitrificans} SCOP: c.67.1.1 PDB: 1ay5_A* 1ay4_A* 1ay8_A* 2ay2_A* 2ay3_A* 2ay4_A* 2ay5_A* 2ay6_A* 2ay7_A* 2ay8_A* 2ay9_A*
Probab=56.58 E-value=68 Score=30.21 Aligned_cols=103 Identities=16% Similarity=0.183 Sum_probs=54.4
Q ss_pred ccCcEEE--eccChHHHHHHHHHHHH--cCCceEEEEecCCCCcchHHHHHHHHhCCCceEEEcc----------hHHHH
Q 045642 198 HQNEVIL--TLGHSKFVKEFLCAAKE--KKRSFEVFIADGAPKFEGHILAKELDKKGLKAIVITD----------SAVFA 263 (406)
Q Consensus 198 ~~g~~IL--T~g~S~tV~~~L~~A~~--~~~~f~ViV~EsrP~~eG~~~a~~L~~~GI~vt~I~D----------sav~~ 263 (406)
....+++ |.|.+..+..++..+.. .|. +|++. .|.+.|... .+...|.++..++- ..+-.
T Consensus 88 ~~~~v~~~~~~g~~~a~~~~~~~~~~~~~gd--~vl~~--~p~~~~~~~--~~~~~g~~~~~~~~~~~~~~~~d~~~l~~ 161 (394)
T 2ay1_A 88 KSETTATLATVGGTGALRQALELARMANPDL--RVFVS--DPTWPNHVS--IMNFMGLPVQTYRYFDAETRGVDFEGMKA 161 (394)
T ss_dssp CGGGEEEEEEEHHHHHHHHHHHHHHHHCTTC--CEEEE--ESCCHHHHH--HHHHHTCCEEEEECEETTTTEECHHHHHH
T ss_pred CcccEEEEecCCchhHHHHHHHHHHhcCCCC--EEEEc--CCCChhHHH--HHHHcCCceEEEecccccCCccCHHHHHH
Confidence 3445666 88877777777665543 333 45554 477777433 23345777776642 13333
Q ss_pred Hhhc---CCEEEEcceeEeeCCCcccccchHHHHHHHhhCCCceEE
Q 045642 264 MISR---VNMVIVGVHAVMANGGVIAPAGLHVLALAAKKHDVPFVV 306 (406)
Q Consensus 264 ~m~~---vd~VllGAdav~~nG~vvnk~GT~~lAl~Ak~~~vPv~V 306 (406)
.+.+ .+++++=...--+.|.+...-=-..++-.|+++++++++
T Consensus 162 ~l~~~~~~~~~~~~~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~ 207 (394)
T 2ay1_A 162 DLAAAKKGDMVLLHGCCHNPTGANLTLDQWAEIASILEKTGALPLI 207 (394)
T ss_dssp HHHTCCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEE
T ss_pred HHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEE
Confidence 4433 245444222222233332221122466778889988776
No 150
>3ke3_A Putative serine-pyruvate aminotransferase; structural genomi center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP; 2.20A {Psychrobacter arcticus 273-4}
Probab=56.56 E-value=1.2e+02 Score=28.52 Aligned_cols=100 Identities=18% Similarity=0.181 Sum_probs=53.3
Q ss_pred cEEEeccChHHHHHHHHHHHHcCCceEEEEecCCCCcchHHHHHHHHhCCC--ceEEEc----------------c-hHH
Q 045642 201 EVILTLGHSKFVKEFLCAAKEKKRSFEVFIADGAPKFEGHILAKELDKKGL--KAIVIT----------------D-SAV 261 (406)
Q Consensus 201 ~~ILT~g~S~tV~~~L~~A~~~~~~f~ViV~EsrP~~eG~~~a~~L~~~GI--~vt~I~----------------D-sav 261 (406)
.+++|-|.+..+..++. +.. +.-+|++.+ +.+.|..+...+...|+ .+..++ | ..+
T Consensus 53 ~v~~~~sgt~a~~~~~~-~~~--~gd~vi~~~--~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~d~~~l 127 (379)
T 3ke3_A 53 AVIIPGSGTYGMEAVAR-QLT--IDEDCLIIR--NGWFSYRWTQILEKGKFAKSSTVLTAERTEDTEAPKPFAPVDIETA 127 (379)
T ss_dssp EEEEESCHHHHHHHHHH-HHC--TTCEEEEEE--CSHHHHHHHHHHHHHCCSSEEEEEECEESSCCSSCCCEECCCHHHH
T ss_pred EEEEcCChhHHHHHHHH-hCC--CCCeEEEEe--CCchhHHHHHHHHHhCCCCceEEEeccccccccccCCCCCCCHHHH
Confidence 45556666666666653 332 334677775 44556555555555665 444442 1 234
Q ss_pred HHHhh--cCCEEEEcceeEeeCCCcccccc-hHHHHHHHhhCCCceEEe
Q 045642 262 FAMIS--RVNMVIVGVHAVMANGGVIAPAG-LHVLALAAKKHDVPFVVV 307 (406)
Q Consensus 262 ~~~m~--~vd~VllGAdav~~nG~vvnk~G-T~~lAl~Ak~~~vPv~V~ 307 (406)
-..+. +...|++- + +-...|.+...+ -..++-+|+.+++++++=
T Consensus 128 ~~~i~~~~~~~v~~~-~-~~~~~G~~~~~~~l~~i~~~~~~~~~~li~D 174 (379)
T 3ke3_A 128 VAKIKEDKSAIVYAP-H-VETSSGIILSEEYIKALSEAVHSVGGLLVID 174 (379)
T ss_dssp HHHHHHHTCSEEEEE-S-EETTTTEECCHHHHHHHHHHHHHTTCEEEEE
T ss_pred HHHHhhcCCcEEEEE-e-ecCCCceeCCHHHHHHHHHHHHHcCCEEEEE
Confidence 44442 45555441 1 111123444433 335777899999988873
No 151
>2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A*
Probab=56.51 E-value=50 Score=33.28 Aligned_cols=112 Identities=18% Similarity=0.241 Sum_probs=71.1
Q ss_pred cccCcEEEeccChHHHHHHHHH-HHHcCCceEEEEecCCC-Ccch-HHHHHHHHhCCCceEEE-cc----hHHHHHhhcC
Q 045642 197 IHQNEVILTLGHSKFVKEFLCA-AKEKKRSFEVFIADGAP-KFEG-HILAKELDKKGLKAIVI-TD----SAVFAMISRV 268 (406)
Q Consensus 197 I~~g~~ILT~g~S~tV~~~L~~-A~~~~~~f~ViV~EsrP-~~eG-~~~a~~L~~~GI~vt~I-~D----sav~~~m~~v 268 (406)
+..+.+||+.|.++.+=..+.. ..++|.. +|+++.-++ ..++ ..++++|.+.|..++++ .| .++..++..+
T Consensus 223 ~~~~~~vLITGgtGgIG~~la~~La~~G~~-~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dv~d~~~v~~~~~~i 301 (486)
T 2fr1_A 223 WKPTGTVLVTGGTGGVGGQIARWLARRGAP-HLLLVSRSGPDADGAGELVAELEALGARTTVAACDVTDRESVRELLGGI 301 (486)
T ss_dssp CCCCSEEEEETTTSHHHHHHHHHHHHHTCS-EEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTS
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHHcCCC-EEEEEcCCCCCcHHHHHHHHHHHhcCCEEEEEEeCCCCHHHHHHHHHHH
Confidence 4567788888888777665544 3334432 355554333 2223 56778898899888766 34 3566667665
Q ss_pred ------CEEEEcceeEeeCCCcc-------------cccchHHHHHHHhhCCCceEEecCC
Q 045642 269 ------NMVIVGVHAVMANGGVI-------------APAGLHVLALAAKKHDVPFVVVAST 310 (406)
Q Consensus 269 ------d~VllGAdav~~nG~vv-------------nk~GT~~lAl~Ak~~~vPv~V~aes 310 (406)
|.||-.| .+..+|.+. |-.|+..+.-+++..+..++|+..|
T Consensus 302 ~~~g~ld~VIh~A-G~~~~~~l~~~~~~~~~~~~~~nv~g~~~L~~~~~~~~~~~~V~~SS 361 (486)
T 2fr1_A 302 GDDVPLSAVFHAA-ATLDDGTVDTLTGERIERASRAKVLGARNLHELTRELDLTAFVLFSS 361 (486)
T ss_dssp CTTSCEEEEEECC-CCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTTSCCSEEEEEEE
T ss_pred HhcCCCcEEEECC-ccCCCCccccCCHHHHHHHHHHHHHHHHHHHHHhCcCCCCEEEEEcC
Confidence 6666554 333344322 5678888888888888888887665
No 152
>4eb5_A Probable cysteine desulfurase 2; scaffold, transferase-metal binding protein complex; HET: PLP EPE; 2.53A {Archaeoglobus fulgidus} PDB: 4eb7_A*
Probab=56.37 E-value=1.3e+02 Score=27.92 Aligned_cols=96 Identities=16% Similarity=0.134 Sum_probs=52.1
Q ss_pred cEEEeccChHHHHHHHHHHH----HcCCceEEEEecCCCCcchH-HHHHHHHhCCCceEEEcc--------hHHHHHhhc
Q 045642 201 EVILTLGHSKFVKEFLCAAK----EKKRSFEVFIADGAPKFEGH-ILAKELDKKGLKAIVITD--------SAVFAMISR 267 (406)
Q Consensus 201 ~~ILT~g~S~tV~~~L~~A~----~~~~~f~ViV~EsrP~~eG~-~~a~~L~~~GI~vt~I~D--------sav~~~m~~ 267 (406)
.+++|.|.+..+..++..+. +.|. +|++. .|.+.+. ..+..+...|+.+..++- ..+-..+..
T Consensus 62 ~v~~~~g~t~a~~~~~~~l~~~~~~~gd--~Vl~~--~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~ 137 (382)
T 4eb5_A 62 TVVFTSGATEANNLAIIGYAMRNARKGK--HILVS--AVEHMSVINPAKFLQKQGFEVEYIPVGKYGEVDVSFIDQKLRD 137 (382)
T ss_dssp EEEEESSHHHHHHHHHHHHHHHHGGGCC--EEEEE--TTCCHHHHHHHHHHTTTTCEEEEECBCTTSCBCHHHHHHHCCT
T ss_pred eEEEcCchHHHHHHHHHHHHhhccCCCC--EEEEC--CCcchHHHHHHHHHHhCCcEEEEeccCCCCccCHHHHHHHhcC
Confidence 56777777766666666654 3443 55554 4455554 444455668998888752 122233322
Q ss_pred CCEEEEcceeEeeCCCcccccchHHHHHHHhhCCCc
Q 045642 268 VNMVIVGVHAVMANGGVIAPAGLHVLALAAKKHDVP 303 (406)
Q Consensus 268 vd~VllGAdav~~nG~vvnk~GT~~lAl~Ak~~~vP 303 (406)
-.++|+-...-.+.|.+.. --.++-+|++++++
T Consensus 138 ~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~ 170 (382)
T 4eb5_A 138 DTILVSVQHANNEIGTIQP---VEEISEVLAGKAAL 170 (382)
T ss_dssp TEEEEECCSBCTTTCBBCC---HHHHHHHHTTSSEE
T ss_pred CCeEEEEeccCCCccccCC---HHHHHHHHHHCCCE
Confidence 1244433322222344433 24677788888876
No 153
>3tqr_A Phosphoribosylglycinamide formyltransferase; purines, pyrimidines, nucleosides, nucleotides; HET: NHE; 1.97A {Coxiella burnetii} SCOP: c.65.1.0
Probab=56.31 E-value=39 Score=30.51 Aligned_cols=69 Identities=14% Similarity=0.209 Sum_probs=43.6
Q ss_pred EEeccChHHHHHHHHHHHHcCCceEEEEec-CCCCcchHHHHHHHHhCCCceEEEc----------chHHHHHhhc--CC
Q 045642 203 ILTLGHSKFVKEFLCAAKEKKRSFEVFIAD-GAPKFEGHILAKELDKKGLKAIVIT----------DSAVFAMISR--VN 269 (406)
Q Consensus 203 ILT~g~S~tV~~~L~~A~~~~~~f~ViV~E-srP~~eG~~~a~~L~~~GI~vt~I~----------Dsav~~~m~~--vd 269 (406)
||.-|..+..+.++.... .+.+++|..+- .+|...|...| .+.||++..+. |..+...++. +|
T Consensus 10 vl~SG~Gsnl~all~~~~-~~~~~eI~~Vis~~~~a~~~~~A---~~~gIp~~~~~~~~~~~r~~~d~~~~~~l~~~~~D 85 (215)
T 3tqr_A 10 VLISGNGTNLQAIIGAIQ-KGLAIEIRAVISNRADAYGLKRA---QQADIPTHIIPHEEFPSRTDFESTLQKTIDHYDPK 85 (215)
T ss_dssp EEESSCCHHHHHHHHHHH-TTCSEEEEEEEESCTTCHHHHHH---HHTTCCEEECCGGGSSSHHHHHHHHHHHHHTTCCS
T ss_pred EEEeCCcHHHHHHHHHHH-cCCCCEEEEEEeCCcchHHHHHH---HHcCCCEEEeCccccCchhHhHHHHHHHHHhcCCC
Confidence 555577777777776665 44556666444 47776675444 45799999874 3455555553 78
Q ss_pred EEEEcc
Q 045642 270 MVIVGV 275 (406)
Q Consensus 270 ~VllGA 275 (406)
.+++.+
T Consensus 86 liv~ag 91 (215)
T 3tqr_A 86 LIVLAG 91 (215)
T ss_dssp EEEESS
T ss_pred EEEEcc
Confidence 887754
No 154
>3acz_A Methionine gamma-lyase; L-methionine; HET: LLP; 1.97A {Entamoeba histolytica} PDB: 3aej_A* 3ael_A* 3aem_A* 3aen_A* 3aeo_A* 3aep_A*
Probab=55.63 E-value=42 Score=32.22 Aligned_cols=97 Identities=16% Similarity=0.101 Sum_probs=52.4
Q ss_pred cEEEeccChHHHHHHHHHHHHcCCceEEEEecCCCCcchH-HHHHH-HHhCCCceEEEcchH---HHHHhhc-CCEEEEc
Q 045642 201 EVILTLGHSKFVKEFLCAAKEKKRSFEVFIADGAPKFEGH-ILAKE-LDKKGLKAIVITDSA---VFAMISR-VNMVIVG 274 (406)
Q Consensus 201 ~~ILT~g~S~tV~~~L~~A~~~~~~f~ViV~EsrP~~eG~-~~a~~-L~~~GI~vt~I~Dsa---v~~~m~~-vd~VllG 274 (406)
+.|++-|.+..+..++..+.+.| -+|++.+ |.+.|. ..... +...|+++..++-.- +...+.. ...|++
T Consensus 76 ~~i~~~sG~~ai~~~~~~~~~~g--d~vl~~~--~~y~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~i~~~~~~v~~- 150 (389)
T 3acz_A 76 GSAAFGSGMGAISSSTLAFLQKG--DHLIAGD--TLYGCTVSLFTHWLPRFGIEVDLIDTSDVEKVKAAWKPNTKMVYL- 150 (389)
T ss_dssp EEEEESSHHHHHHHHHTTTCCTT--CEEEEES--SCCHHHHHHHHHHHHHTTCEEEEECTTCHHHHHHTCCTTEEEEEE-
T ss_pred eEEEeCCHHHHHHHHHHHHhCCC--CEEEEeC--CCchHHHHHHHHHHHHcCCEEEEECCCCHHHHHHhcCCCCeEEEE-
Confidence 56776665555544544443233 3566654 566663 33333 567899999886322 2222322 223333
Q ss_pred ceeEe-eCCCcccccchHHHHHHHhhCCCceEE
Q 045642 275 VHAVM-ANGGVIAPAGLHVLALAAKKHDVPFVV 306 (406)
Q Consensus 275 Adav~-~nG~vvnk~GT~~lAl~Ak~~~vPv~V 306 (406)
+.+. ..|.+. . -..++-+|+.+++++++
T Consensus 151 -~~~~nptG~~~-~--l~~i~~~~~~~~~~liv 179 (389)
T 3acz_A 151 -ESPANPTCKVS-D--IKGIAVVCHERGARLVV 179 (389)
T ss_dssp -ESSCTTTCCCC-C--HHHHHHHHHHHTCEEEE
T ss_pred -ECCCCCCCeec-C--HHHHHHHHHHcCCEEEE
Confidence 2222 223333 2 35677888999998876
No 155
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=55.57 E-value=28 Score=30.14 Aligned_cols=100 Identities=16% Similarity=0.128 Sum_probs=58.6
Q ss_pred EEEeccChHHHHHHHHHH-HHcCCceEEEEecCCCCcchHHHHHHHHhCCCceEEE--cchHHHHHhhcCCEEEEcceeE
Q 045642 202 VILTLGHSKFVKEFLCAA-KEKKRSFEVFIADGAPKFEGHILAKELDKKGLKAIVI--TDSAVFAMISRVNMVIVGVHAV 278 (406)
Q Consensus 202 ~ILT~g~S~tV~~~L~~A-~~~~~~f~ViV~EsrP~~eG~~~a~~L~~~GI~vt~I--~Dsav~~~m~~vd~VllGAdav 278 (406)
.||..|.++.+=..|... .++ ..+|+++.-+|. -+..|...++.+... .|... ..+..+|.||--|-..
T Consensus 2 kilVtGatG~iG~~l~~~L~~~--g~~V~~~~R~~~-----~~~~~~~~~~~~~~~D~~d~~~-~~~~~~d~vi~~ag~~ 73 (224)
T 3h2s_A 2 KIAVLGATGRAGSAIVAEARRR--GHEVLAVVRDPQ-----KAADRLGATVATLVKEPLVLTE-ADLDSVDAVVDALSVP 73 (224)
T ss_dssp EEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCHH-----HHHHHTCTTSEEEECCGGGCCH-HHHTTCSEEEECCCCC
T ss_pred EEEEEcCCCHHHHHHHHHHHHC--CCEEEEEEeccc-----ccccccCCCceEEecccccccH-hhcccCCEEEECCccC
Confidence 477778877666655444 333 467777754432 123444456554322 23223 5667777777655322
Q ss_pred e-eCCCcccccchHHHHHHHhhCCCceEEecC
Q 045642 279 M-ANGGVIAPAGLHVLALAAKKHDVPFVVVAS 309 (406)
Q Consensus 279 ~-~nG~vvnk~GT~~lAl~Ak~~~vPv~V~ae 309 (406)
. ....-.|..|+..+.-+|+..+..++.++.
T Consensus 74 ~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~SS 105 (224)
T 3h2s_A 74 WGSGRGYLHLDFATHLVSLLRNSDTLAVFILG 105 (224)
T ss_dssp TTSSCTHHHHHHHHHHHHTCTTCCCEEEEECC
T ss_pred CCcchhhHHHHHHHHHHHHHHHcCCcEEEEec
Confidence 1 111234788999999999999977777653
No 156
>1z7d_A Ornithine aminotransferase; structural genomics consortium, SGC, malaria; 2.10A {Plasmodium yoelii yoelii} SCOP: c.67.1.4 PDB: 3lg0_A 3ntj_A
Probab=55.55 E-value=1.1e+02 Score=29.79 Aligned_cols=109 Identities=16% Similarity=0.202 Sum_probs=52.1
Q ss_pred HhcccCcEEEeccChHHHHHHHHHHHH---------cCCceEEEEecCCCCcchHHH-HHHHHh-----CC-----CceE
Q 045642 195 ELIHQNEVILTLGHSKFVKEFLCAAKE---------KKRSFEVFIADGAPKFEGHIL-AKELDK-----KG-----LKAI 254 (406)
Q Consensus 195 ~~I~~g~~ILT~g~S~tV~~~L~~A~~---------~~~~f~ViV~EsrP~~eG~~~-a~~L~~-----~G-----I~vt 254 (406)
++.....+++|.|.+..+..+|+.|.. .| +-+|++.+ |.+.|... +..+.. .| ..+.
T Consensus 118 ~~~g~~~v~~~~sGseA~~~al~~a~~~~~~~~g~~~g-r~~vi~~~--~~yhg~~~~~~~~~g~~~~~~~~~p~~~~v~ 194 (433)
T 1z7d_A 118 NLLGYDKVLMMNTGAEANETAYKLCRKWGYEVKKIPEN-MAKIVVCK--NNFSGRTLGCISASTTKKCTSNFGPFAPQFS 194 (433)
T ss_dssp HHHTCSEEEEESSHHHHHHHHHHHHHHHHHHTSCCCTT-CCEEEEET--TC--------------------------CEE
T ss_pred hhcCCCeEEEeCCHHHHHHHHHHHHHHHhhhccCCCCC-CCeEEEEe--CCcCCcchhhhcccCCccccccCCCCCCCeE
Confidence 334445678888888888888877642 13 24677775 55555322 222221 01 2444
Q ss_pred EEc--c-hHHHHHhhcCCEEEEcceeEeeCCCccc-ccch-HHHHHHHhhCCCceEE
Q 045642 255 VIT--D-SAVFAMISRVNMVIVGVHAVMANGGVIA-PAGL-HVLALAAKKHDVPFVV 306 (406)
Q Consensus 255 ~I~--D-sav~~~m~~vd~VllGAdav~~nG~vvn-k~GT-~~lAl~Ak~~~vPv~V 306 (406)
.++ | .++-..++.-+..++=++-+..++|++. ..+- -.++-+|++|++++++
T Consensus 195 ~~~~~d~~~le~~l~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~ 251 (433)
T 1z7d_A 195 KVPYDDLEALEEELKDPNVCAFIVEPIQGEAGVIVPSDNYLQGVYDICKKYNVLFVA 251 (433)
T ss_dssp EECTTCHHHHHHHHTSTTEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCEEEE
T ss_pred EeCCCCHHHHHHHhCCCCEEEEEEECCCCCCCccCCCHHHHHHHHHHHHHcCCEEEE
Confidence 443 3 2334444211212222344555555432 2322 3466789999998776
No 157
>2hj0_A Putative citrate lyase, ALFA subunit; alpha beta protein., structural genomics, PSI-2, protein STR initiative; HET: CIT; 2.70A {Streptococcus mutans}
Probab=55.30 E-value=65 Score=33.05 Aligned_cols=122 Identities=16% Similarity=0.125 Sum_probs=72.9
Q ss_pred HHHHHh--cccCcEEEeccChHHHH----HHHHHHHHcC-CceEEEEecCCCCcch-------------------HHHHH
Q 045642 191 EQAMEL--IHQNEVILTLGHSKFVK----EFLCAAKEKK-RSFEVFIADGAPKFEG-------------------HILAK 244 (406)
Q Consensus 191 ~~a~~~--I~~g~~ILT~g~S~tV~----~~L~~A~~~~-~~f~ViV~EsrP~~eG-------------------~~~a~ 244 (406)
+.|+++ |++|++|...|....=. .++....+++ ++++++-.-..+...| .. .+
T Consensus 53 eEAv~~~~IkdG~tV~~gGf~g~P~~l~~~Li~AL~~r~~kdLtli~~s~g~~~~~l~~~~~~g~v~r~~~~~~g~~-~r 131 (519)
T 2hj0_A 53 HEAIEKTRLKDGMTISFHHHFREGDYVMNMVLDEIAKMGIKDISIAPSSIANVHEPLIDHIKNGVVTNITSSGLRDK-VG 131 (519)
T ss_dssp HHHHHHTTCCTTCEEEECCTTGGGBCHHHHHHHHHHHTTCCSEEEEESCCCGGGTTHHHHHHTTSEEEEEESBCHHH-HH
T ss_pred HHHHhcCCCCCCCEEEECCccCCchHHHHHHHHHHHhcCCCCeEEEeecCCCcchhHHhHhhcCcEEEEEecCCCcH-HH
Confidence 345567 99999999987754333 5555555433 5677776522222112 11 12
Q ss_pred HHHhCC---CceEEEcchHHHHHhh----cCCEEEEcceeEeeCCCcc---ccc--chHHHHHHHhhCCCceEEecCCcc
Q 045642 245 ELDKKG---LKAIVITDSAVFAMIS----RVNMVIVGVHAVMANGGVI---APA--GLHVLALAAKKHDVPFVVVASTHE 312 (406)
Q Consensus 245 ~L~~~G---I~vt~I~Dsav~~~m~----~vd~VllGAdav~~nG~vv---nk~--GT~~lAl~Ak~~~vPv~V~aes~K 312 (406)
++.+.| +|+.|-......+++. .+|..|+.|...-.+|.+. .+. |+...+.++...+.-|++- .-+
T Consensus 132 ~~i~~G~~~~P~~l~~~gG~~~ll~~~~l~~DVAlI~as~aD~~Gnls~~~g~s~~~s~~~~~~~a~~A~~VIaE--Vn~ 209 (519)
T 2hj0_A 132 AAISEGIMENPVIIRSHGGRARAIATDDIHIDVAFLGAPSSDAYGNANGTRGKTTCGSLGYAMIDAKYADQVVIV--TDT 209 (519)
T ss_dssp HHHHTTCCSSCEEECCHHHHHHHHHHTSSCCSEEEEEESEECTTSCEESSSSSSCCSCCHHHHHHHHHCSEEEEE--ESS
T ss_pred HHHHCCCCCCCceeeccCCHHHHHhcCCCCCcEEEEEecccCCCCcEEEecCccccccchhhHHHHhhCCEEEEE--eCC
Confidence 333344 4665543333666664 4899999999999999887 333 4566777666677755554 334
Q ss_pred ccc
Q 045642 313 LCS 315 (406)
Q Consensus 313 ~~~ 315 (406)
..|
T Consensus 210 ~vP 212 (519)
T 2hj0_A 210 LVP 212 (519)
T ss_dssp BCC
T ss_pred CCC
Confidence 444
No 158
>4dik_A Flavoprotein; TM0755, electron transport, DI-iron protein; 1.75A {Thermotoga maritima} PDB: 4dil_A 1vme_A*
Probab=55.23 E-value=1.6e+02 Score=28.87 Aligned_cols=143 Identities=19% Similarity=0.260 Sum_probs=77.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhccc--CcEEEe-ccC--hHHHHHHHH----HHHHcCCceEE-EEecCCCCcc
Q 045642 169 SELIKAVNELIEDINTCREGIAEQAMELIHQ--NEVILT-LGH--SKFVKEFLC----AAKEKKRSFEV-FIADGAPKFE 238 (406)
Q Consensus 169 ~~l~~~i~~~~~e~~~~~~~I~~~a~~~I~~--g~~ILT-~g~--S~tV~~~L~----~A~~~~~~f~V-iV~EsrP~~e 238 (406)
+...+....+...+-.........+.+.|.+ -+.|.. ||. -..+.++|. -+..+...-+| |+-.|.-++-
T Consensus 200 e~~~~~~~~yy~~i~~p~~~~v~~~L~kl~~Ldi~~I~P~HGpi~r~~~~~ii~~Y~~w~~~~~~~~~v~I~Y~S~yGnT 279 (410)
T 4dik_A 200 ERYLPHVTKYIVTVIGHYKNYILEGAEKLSSLKIKALLPGHGLIWKKDPQRLLNHYVSVAKGDPKKGKVTVIYDSMYGFV 279 (410)
T ss_dssp HHHHHHHHHHHHHHHGGGHHHHHHHHHHHHTSCCSEEEESSSCBBSSCHHHHHHHHHHHHHTCCCTTEEEEEEECSSSHH
T ss_pred HHHHHHHHHHHHhhccchHHHHHHHHHHHhCCCCCEEecCCcchhhcCHHHHHHHHHHhhcccccccceeeEEecccChH
Confidence 3344455555555443333333444444432 344554 442 112334443 23222222244 4556665432
Q ss_pred h---HHHHHHHHhCCCceEEE--cch---HHHHHh---hcCCEEEEcceeEeeCCCcccccchHHHHHHHhhC-CCceEE
Q 045642 239 G---HILAKELDKKGLKAIVI--TDS---AVFAMI---SRVNMVIVGVHAVMANGGVIAPAGLHVLALAAKKH-DVPFVV 306 (406)
Q Consensus 239 G---~~~a~~L~~~GI~vt~I--~Ds---av~~~m---~~vd~VllGAdav~~nG~vvnk~GT~~lAl~Ak~~-~vPv~V 306 (406)
- ..+|+.|.+.|+++.++ .|. .+..++ .+++.+++|+-++ ||++.-.+-....-+.+..+ ++++-
T Consensus 280 e~mA~~ia~gl~~~Gv~~~~~~~~d~~~~~~s~i~~~i~~~~~ivlGspT~--~~~~~p~~~~~l~~l~~~~~~~K~~~- 356 (410)
T 4dik_A 280 ENVMKKAIDSLKEKGFTPVVYKFSDEERPAISEILKDIPDSEALIFGVSTY--EAEIHPLMRFTLLEIIDKANYEKPVL- 356 (410)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEEECSSCCCCHHHHHHHSTTCSEEEEEECCT--TSSSCHHHHHHHHHHHHHCCCCCEEE-
T ss_pred HHHHHHHHHHHHhcCCceEEEEeccCCCCCHHHHHHHHHhCCeEEEEeCCc--CCcCCHHHHHHHHHHHhcccCCCEEE-
Confidence 2 35667777899998753 442 244444 4799999999886 57788777766666666665 56654
Q ss_pred ecCCcccc
Q 045642 307 VASTHELC 314 (406)
Q Consensus 307 ~aes~K~~ 314 (406)
+.++|-.+
T Consensus 357 ~FGSyGWs 364 (410)
T 4dik_A 357 VFGVHGWA 364 (410)
T ss_dssp EEEECCCC
T ss_pred EEECCCCC
Confidence 45666544
No 159
>4f4e_A Aromatic-amino-acid aminotransferase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: LLP; 1.80A {Burkholderia pseudomallei} PDB: 4eff_A*
Probab=55.23 E-value=77 Score=30.37 Aligned_cols=100 Identities=17% Similarity=0.170 Sum_probs=54.4
Q ss_pred cEEEeccChHHHHHHHH--HHHHcCCceEEEEecCCCCcchHHHHHHHHhCCCceEEEcc----------hHHHHHhh--
Q 045642 201 EVILTLGHSKFVKEFLC--AAKEKKRSFEVFIADGAPKFEGHILAKELDKKGLKAIVITD----------SAVFAMIS-- 266 (406)
Q Consensus 201 ~~ILT~g~S~tV~~~L~--~A~~~~~~f~ViV~EsrP~~eG~~~a~~L~~~GI~vt~I~D----------sav~~~m~-- 266 (406)
.+++|.|.+..+..+++ .....| -+|++.+ |.+.+.. ..+...|.++..++- ..+-..+.
T Consensus 119 ~i~~t~G~t~al~~~~~~~~~~~~g--d~Vlv~~--p~~~~~~--~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~ 192 (420)
T 4f4e_A 119 VTAQALGGTGALKIGADFLRTLNPK--AKVAISD--PSWENHR--ALFDMAGFEVVAYPYYDAKTNGVNFDGMLAALNGY 192 (420)
T ss_dssp EEEEEEHHHHHHHHHHHHHHHHCTT--CCEEEEE--SCCHHHH--HHHHHTTCCEEEEECEETTTTEECHHHHHHHHTTC
T ss_pred EEEECCccHHHHHHHHHHHHHhCCC--CEEEEeC--CCcHhHH--HHHHHcCCeEEEeeeeccccCccCHHHHHHHHHhC
Confidence 67888888877777643 223233 3456553 7777642 334457887777642 13333343
Q ss_pred -cCCEEEEcceeEeeCCCcccccchHHHHHHHhhCCCceEE
Q 045642 267 -RVNMVIVGVHAVMANGGVIAPAGLHVLALAAKKHDVPFVV 306 (406)
Q Consensus 267 -~vd~VllGAdav~~nG~vvnk~GT~~lAl~Ak~~~vPv~V 306 (406)
.-+++++=...--+.|.+...---..++-+|+++++.+++
T Consensus 193 ~~~~~~v~i~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~ 233 (420)
T 4f4e_A 193 EPGTIVVLHACCHNPTGVDLNDAQWAQVVEVVKARRLVPFL 233 (420)
T ss_dssp CTTCEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEE
T ss_pred CCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEE
Confidence 2233333222222233333333334677788999988776
No 160
>2o0r_A RV0858C (N-succinyldiaminopimelate aminotransfera; PLP-binding enzyme, lysine biosynthesis, aminotransferase, S genomics; HET: LLP; 2.00A {Mycobacterium tuberculosis}
Probab=55.22 E-value=70 Score=30.48 Aligned_cols=110 Identities=18% Similarity=0.280 Sum_probs=60.5
Q ss_pred HHHHHHHHHHHHHhc----ccC-cEEEeccChHHHHHHHHHHHHcCCceEEEEecCCCCcchHHHHHHHHhCCCceEEEc
Q 045642 183 NTCREGIAEQAMELI----HQN-EVILTLGHSKFVKEFLCAAKEKKRSFEVFIADGAPKFEGHILAKELDKKGLKAIVIT 257 (406)
Q Consensus 183 ~~~~~~I~~~a~~~I----~~g-~~ILT~g~S~tV~~~L~~A~~~~~~f~ViV~EsrP~~eG~~~a~~L~~~GI~vt~I~ 257 (406)
...++.+++...+.. ... .+++|.|.+..+..++..+.+.| -+|++.+ |.+.|.. ..+...|+++..++
T Consensus 65 ~~l~~~la~~~~~~~g~~~~~~~~v~~t~g~~~al~~~~~~~~~~g--d~Vl~~~--~~y~~~~--~~~~~~g~~~~~v~ 138 (411)
T 2o0r_A 65 APLRRAIAAQRRRHFGVDYDPETEVLVTVGATEAIAAAVLGLVEPG--SEVLLIE--PFYDSYS--PVVAMAGAHRVTVP 138 (411)
T ss_dssp HHHHHHHHHHHHHHHCCCCCTTTSEEEEEHHHHHHHHHHHHHCCTT--CEEEEEE--SCCTTHH--HHHHHTTCEEEEEE
T ss_pred HHHHHHHHHHHHHHcCCCCCCCceEEEeCCHHHHHHHHHHHhcCCC--CEEEEeC--CCcHhHH--HHHHHcCCEEEEee
Confidence 344556665544332 233 68888887777777777664333 3566543 5555543 23456788776664
Q ss_pred c-----------hHHHHHhh-cCCEEEEcceeEeeCCCcccccch-------HHHHHHHhhCCCceEE
Q 045642 258 D-----------SAVFAMIS-RVNMVIVGVHAVMANGGVIAPAGL-------HVLALAAKKHDVPFVV 306 (406)
Q Consensus 258 D-----------sav~~~m~-~vd~VllGAdav~~nG~vvnk~GT-------~~lAl~Ak~~~vPv~V 306 (406)
- ..+-..+. ++..|++. ..-|..|. ..++-.|+.+++++++
T Consensus 139 ~~~~~~~~~~d~~~l~~~l~~~~~~v~l~--------~~~nptG~~~~~~~l~~i~~~~~~~~~~li~ 198 (411)
T 2o0r_A 139 LVPDGRGFALDADALRRAVTPRTRALIIN--------SPHNPTGAVLSATELAAIAEIAVAANLVVIT 198 (411)
T ss_dssp CEEETTEEECCHHHHHHHCCTTEEEEEEE--------SSCTTTCCCCCHHHHHHHHHHHHHTTCEEEE
T ss_pred ccccccCCCCCHHHHHHhhccCceEEEEe--------CCCCCCCCCCCHHHHHHHHHHHHHcCCEEEE
Confidence 1 12222232 22233321 22344444 4677788999998886
No 161
>2ch1_A 3-hydroxykynurenine transaminase; PLP-enzyme, kynurenine pathway, transferase; HET: LLP; 2.4A {Anopheles gambiae} SCOP: c.67.1.3 PDB: 2ch2_A*
Probab=55.19 E-value=48 Score=31.21 Aligned_cols=98 Identities=14% Similarity=0.152 Sum_probs=56.1
Q ss_pred cEEEeccChHHHHHHHHHHHHcCCceEEEEecCCCCcchHHHHHHHHhCCCceEEEcc--------hHHHHHhh--cCCE
Q 045642 201 EVILTLGHSKFVKEFLCAAKEKKRSFEVFIADGAPKFEGHILAKELDKKGLKAIVITD--------SAVFAMIS--RVNM 270 (406)
Q Consensus 201 ~~ILT~g~S~tV~~~L~~A~~~~~~f~ViV~EsrP~~eG~~~a~~L~~~GI~vt~I~D--------sav~~~m~--~vd~ 270 (406)
.+++|.|.+..+..++..+.+.| -+|++. .|.+.+......+...|+++..++- ..+-..+. +...
T Consensus 71 ~v~~~~g~t~al~~~~~~~~~~g--d~vl~~--~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~~~~ 146 (396)
T 2ch1_A 71 TMCVSGSAHAGMEAMLSNLLEEG--DRVLIA--VNGIWAERAVEMSERYGADVRTIEGPPDRPFSLETLARAIELHQPKC 146 (396)
T ss_dssp EEEESSCHHHHHHHHHHHHCCTT--CEEEEE--ESSHHHHHHHHHHHHTTCEEEEEECCTTSCCCHHHHHHHHHHHCCSE
T ss_pred EEEECCcHHHHHHHHHHHhcCCC--CeEEEE--cCCcccHHHHHHHHHcCCceEEecCCCCCCCCHHHHHHHHHhCCCCE
Confidence 46677776666666666664333 356655 4556665434456678988887751 12333333 4555
Q ss_pred EEEcceeEeeCCCcccccchHHHHHHHhhCCCceEE
Q 045642 271 VIVGVHAVMANGGVIAPAGLHVLALAAKKHDVPFVV 306 (406)
Q Consensus 271 VllGAdav~~nG~vvnk~GT~~lAl~Ak~~~vPv~V 306 (406)
|++ ...--..|.+.. --.++-+|+++++++++
T Consensus 147 v~~-~~~~nptG~~~~---~~~i~~l~~~~~~~li~ 178 (396)
T 2ch1_A 147 LFL-THGDSSSGLLQP---LEGVGQICHQHDCLLIV 178 (396)
T ss_dssp EEE-ESEETTTTEECC---CTTHHHHHHHTTCEEEE
T ss_pred EEE-ECCCCCCceecC---HHHHHHHHHHcCCEEEE
Confidence 655 222233354444 23567778888987765
No 162
>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*
Probab=54.97 E-value=22 Score=32.26 Aligned_cols=99 Identities=21% Similarity=0.137 Sum_probs=60.3
Q ss_pred CcEEEeccChHHHHHHHHHHHHcCCceEEEEecCCCCcchHHHHHHHHhCCCceEEE-cc----hHHHHHhhcCCEEEEc
Q 045642 200 NEVILTLGHSKFVKEFLCAAKEKKRSFEVFIADGAPKFEGHILAKELDKKGLKAIVI-TD----SAVFAMISRVNMVIVG 274 (406)
Q Consensus 200 g~~ILT~g~S~tV~~~L~~A~~~~~~f~ViV~EsrP~~eG~~~a~~L~~~GI~vt~I-~D----sav~~~m~~vd~VllG 274 (406)
+.+||..|.++.+=..|.... ..+..+|+++.-.+.... +-.+.++ .| .++..++.++|.||--
T Consensus 3 ~k~vlVTGasg~IG~~la~~L-~~~G~~V~~~~r~~~~~~----------~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~ 71 (267)
T 3rft_A 3 MKRLLVTGAAGQLGRVMRERL-APMAEILRLADLSPLDPA----------GPNEECVQCDLADANAVNAMVAGCDGIVHL 71 (267)
T ss_dssp EEEEEEESTTSHHHHHHHHHT-GGGEEEEEEEESSCCCCC----------CTTEEEEECCTTCHHHHHHHHTTCSEEEEC
T ss_pred CCEEEEECCCCHHHHHHHHHH-HhcCCEEEEEecCCcccc----------CCCCEEEEcCCCCHHHHHHHHcCCCEEEEC
Confidence 457888888887777666554 234578888765553221 2223322 22 3566677777776654
Q ss_pred ceeEeeCCC-----cccccchHHHHHHHhhCCCceEEecCC
Q 045642 275 VHAVMANGG-----VIAPAGLHVLALAAKKHDVPFVVVAST 310 (406)
Q Consensus 275 Adav~~nG~-----vvnk~GT~~lAl~Ak~~~vPv~V~aes 310 (406)
|-. ..... -+|-.|+..+.-+|+.++++-+|...|
T Consensus 72 Ag~-~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~iv~~SS 111 (267)
T 3rft_A 72 GGI-SVEKPFEQILQGNIIGLYNLYEAARAHGQPRIVFASS 111 (267)
T ss_dssp CSC-CSCCCHHHHHHHHTHHHHHHHHHHHHTTCCEEEEEEE
T ss_pred CCC-cCcCCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcc
Confidence 422 11111 257889999999999998765555444
No 163
>3nbm_A PTS system, lactose-specific IIBC components; PTS_IIB_LACTOSE, phosphoenolpyruvate:carbohydrate system, P- phosphorylation; HET: MSE; 1.30A {Streptococcus pneumoniae}
Probab=54.94 E-value=15 Score=29.52 Aligned_cols=53 Identities=9% Similarity=0.198 Sum_probs=35.8
Q ss_pred HHhCCCceEEE--cchHHHHHhhcCCEEEEcceeEeeCCCcccccchHHHHHHHhhCCCceEEe
Q 045642 246 LDKKGLKAIVI--TDSAVFAMISRVNMVIVGVHAVMANGGVIAPAGLHVLALAAKKHDVPFVVV 307 (406)
Q Consensus 246 L~~~GI~vt~I--~Dsav~~~m~~vd~VllGAdav~~nG~vvnk~GT~~lAl~Ak~~~vPv~V~ 307 (406)
..+.|+++... +.+.+...+.++|.|++|...-+.- -.+--.|..+++||.|+
T Consensus 30 a~~~gi~v~i~a~~~~~~~~~~~~~DvvLLgPQV~y~~---------~~ik~~~~~~~ipV~vI 84 (108)
T 3nbm_A 30 ANLTEVRVIANSGAYGAHYDIMGVYDLIILAPQVRSYY---------REMKVDAERLGIQIVAT 84 (108)
T ss_dssp HHHHTCSEEEEEEETTSCTTTGGGCSEEEECGGGGGGH---------HHHHHHHTTTTCEEEEC
T ss_pred HHHCCCceEEEEcchHHHHhhccCCCEEEEChHHHHHH---------HHHHHHhhhcCCcEEEe
Confidence 33467887774 4555556678899999998764321 12444566789999986
No 164
>1j32_A Aspartate aminotransferase; HET: PLP; 2.10A {Phormidium lapideum} SCOP: c.67.1.1
Probab=54.42 E-value=52 Score=30.95 Aligned_cols=102 Identities=15% Similarity=0.197 Sum_probs=53.6
Q ss_pred ccCcEEEeccChHHHHHHHHHHHHcCCceEEEEecCCCCcchHHHHHHHHhCCCceEEEcch----------HHHHHhh-
Q 045642 198 HQNEVILTLGHSKFVKEFLCAAKEKKRSFEVFIADGAPKFEGHILAKELDKKGLKAIVITDS----------AVFAMIS- 266 (406)
Q Consensus 198 ~~g~~ILT~g~S~tV~~~L~~A~~~~~~f~ViV~EsrP~~eG~~~a~~L~~~GI~vt~I~Ds----------av~~~m~- 266 (406)
....+++|.|.+..+..++..+.+.| -+|++. .|.+.+... .+...|+++..++-. .+-..+.
T Consensus 89 ~~~~v~~~~g~~~a~~~~~~~~~~~g--d~vl~~--~~~~~~~~~--~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~ 162 (388)
T 1j32_A 89 GADNILVTNGGKQSIFNLMLAMIEPG--DEVIIP--APFWVSYPE--MVKLAEGTPVILPTTVETQFKVSPEQIRQAITP 162 (388)
T ss_dssp CGGGEEEESHHHHHHHHHHHHHCCTT--CEEEEE--SSCCTHHHH--HHHHTTCEEEEECCCGGGTTCCCHHHHHHHCCT
T ss_pred ChhhEEEcCCHHHHHHHHHHHhcCCC--CEEEEc--CCCChhHHH--HHHHcCCEEEEecCCcccCCCCCHHHHHHhcCc
Confidence 34567888887777777777765334 255554 455666432 344578888777522 1222222
Q ss_pred cCCEEEEcceeEeeCCCcccccchHHHHHHHhhCCCceEE
Q 045642 267 RVNMVIVGVHAVMANGGVIAPAGLHVLALAAKKHDVPFVV 306 (406)
Q Consensus 267 ~vd~VllGAdav~~nG~vvnk~GT~~lAl~Ak~~~vPv~V 306 (406)
+...|++ ...--+.|.++.+-=-..++-+|+++++++++
T Consensus 163 ~~~~v~~-~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~ 201 (388)
T 1j32_A 163 KTKLLVF-NTPSNPTGMVYTPDEVRAIAQVAVEAGLWVLS 201 (388)
T ss_dssp TEEEEEE-ESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEE
T ss_pred CceEEEE-eCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEE
Confidence 2222332 11111123222221123566778889998876
No 165
>3ly1_A Putative histidinol-phosphate aminotransferase; structural G joint center for structural genomics, JCSG; HET: MSE PLP CIT; 1.80A {Erwinia carotovora atroseptica}
Probab=54.33 E-value=46 Score=30.83 Aligned_cols=98 Identities=15% Similarity=0.205 Sum_probs=52.5
Q ss_pred cCcEEEeccChHHHHHHHHHHHHcCCceEEEEecCCCCcchHHHHHHHHhCCCceEEEcch--------HHHHHhh---c
Q 045642 199 QNEVILTLGHSKFVKEFLCAAKEKKRSFEVFIADGAPKFEGHILAKELDKKGLKAIVITDS--------AVFAMIS---R 267 (406)
Q Consensus 199 ~g~~ILT~g~S~tV~~~L~~A~~~~~~f~ViV~EsrP~~eG~~~a~~L~~~GI~vt~I~Ds--------av~~~m~---~ 267 (406)
...+++|.|.+..+..++....+.| -+|++.+ |.+.+. ...+...|+++..++-. .+-..+. +
T Consensus 68 ~~~i~~~~g~~~a~~~~~~~l~~~g--d~vl~~~--~~~~~~--~~~~~~~g~~~~~~~~~~~~~~d~~~l~~~l~~~~~ 141 (354)
T 3ly1_A 68 APSILLTAGSSEGIRAAIEAYASLE--AQLVIPE--LTYGDG--EHFAKIAGMKVTKVKMLDNWAFDIEGLKAAVAAYSG 141 (354)
T ss_dssp GGGEEEESHHHHHHHHHHHHHCCTT--CEEEEES--SSCTHH--HHHHHHTTCEEEEECCCTTSCCCHHHHHHHHHTCSS
T ss_pred hHHEEEeCChHHHHHHHHHHHhCCC--CeEEECC--CCchHH--HHHHHHcCCEEEEecCCCCCCCCHHHHHHHhccCCC
Confidence 4567787777777766666654333 3566554 666663 33445679988888622 3444443 4
Q ss_pred CCEEEEcceeEeeCCCcccccchHHHHHHHhh--CCCceEE
Q 045642 268 VNMVIVGVHAVMANGGVIAPAGLHVLALAAKK--HDVPFVV 306 (406)
Q Consensus 268 vd~VllGAdav~~nG~vvnk~GT~~lAl~Ak~--~~vPv~V 306 (406)
...|++ ...--+.|.+...- .+.-+++. +++++++
T Consensus 142 ~~~v~l-~~p~nptG~~~~~~---~l~~l~~~~~~~~~li~ 178 (354)
T 3ly1_A 142 PSIVYL-VNPNNPTGTITPAD---VIEPWIASKPANTMFIV 178 (354)
T ss_dssp CEEEEE-ESSCTTTCCCCCHH---HHHHHHHTCCTTEEEEE
T ss_pred CCEEEE-eCCCCCcCCCcCHH---HHHHHHHhCCCCeEEEE
Confidence 555554 22222223333222 24444444 7776665
No 166
>2bwn_A 5-aminolevulinate synthase; tetrapyrrole biosynthesis, heme biosynthesis, pyridoxal PHOS dependent, transferase, acyltransferase; HET: LLP; 2.1A {Rhodobacter capsulatus} SCOP: c.67.1.4 PDB: 2bwo_A* 2bwp_A*
Probab=54.28 E-value=1.4e+02 Score=27.98 Aligned_cols=105 Identities=7% Similarity=0.038 Sum_probs=50.8
Q ss_pred HhcccCcEEEeccChHHHHHHHHHHHHcCCceEEEEecCCCCcchHHHHHHHHhCCCceEEEcch---HHHHHhhc----
Q 045642 195 ELIHQNEVILTLGHSKFVKEFLCAAKEKKRSFEVFIADGAPKFEGHILAKELDKKGLKAIVITDS---AVFAMISR---- 267 (406)
Q Consensus 195 ~~I~~g~~ILT~g~S~tV~~~L~~A~~~~~~f~ViV~EsrP~~eG~~~a~~L~~~GI~vt~I~Ds---av~~~m~~---- 267 (406)
+++...+.|+..+.+.....++..+...+..-+|++.+ |.+.+...+ +...|.++..++-. .+-..+.+
T Consensus 102 ~~~~~~~~i~~~sG~~a~~~~~~~l~~~~~gd~Vl~~~--~~~~~~~~~--~~~~g~~~~~v~~~d~~~le~~l~~~~~~ 177 (401)
T 2bwn_A 102 GLHQKEAALVFSSAYNANDATLSTLRVLFPGLIIYSDS--LNHASMIEG--IKRNAGPKRIFRHNDVAHLRELIAADDPA 177 (401)
T ss_dssp HHTTCSEEEEESCHHHHHHHHHHHHHHHSTTCEEEEET--TCCHHHHHH--HHHSCCCEEEECTTCHHHHHHHHHHSCTT
T ss_pred HHhCCCcEEEECCcHHHHHHHHHHHhcCCCCCEEEECc--hhhHHHHHH--HHHcCCeEEEEcCCCHHHHHHHHHhhccC
Confidence 34443344444333333333333322212223555543 666554332 34579998888632 33444442
Q ss_pred CCEEEEcceeEeeCCCcccccchHHHHHHHhhCCCceEE
Q 045642 268 VNMVIVGVHAVMANGGVIAPAGLHVLALAAKKHDVPFVV 306 (406)
Q Consensus 268 vd~VllGAdav~~nG~vvnk~GT~~lAl~Ak~~~vPv~V 306 (406)
-.++|+-...--..|.+.. -..++-+|+++++++++
T Consensus 178 ~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~ 213 (401)
T 2bwn_A 178 APKLIAFESVYSMDGDFGP---IKEICDIAEEFGALTYI 213 (401)
T ss_dssp SCEEEEEESBCTTTCCBCC---HHHHHHHHHHHTCEEEE
T ss_pred CceEEEEecCcCCCCCcCC---HHHHHHHHHHcCCEEEE
Confidence 1233332222222344433 35677889999988776
No 167
>3mt0_A Uncharacterized protein PA1789; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 1.58A {Pseudomonas aeruginosa}
Probab=54.25 E-value=1.3e+02 Score=27.28 Aligned_cols=97 Identities=12% Similarity=0.119 Sum_probs=57.7
Q ss_pred HHHHHHHHHHHcCCceEEEEecCCCCcch----HHHHHHHHhCCCceEEEcc---hHHHHHh-----hcCCEEEEcceeE
Q 045642 211 FVKEFLCAAKEKKRSFEVFIADGAPKFEG----HILAKELDKKGLKAIVITD---SAVFAMI-----SRVNMVIVGVHAV 278 (406)
Q Consensus 211 tV~~~L~~A~~~~~~f~ViV~EsrP~~eG----~~~a~~L~~~GI~vt~I~D---sav~~~m-----~~vd~VllGAdav 278 (406)
.+...+..|...+..+.++-+.. | .+. ..+++.+...|++++...- .....+. .++|.|++|.+.
T Consensus 23 al~~A~~la~~~~a~l~ll~v~~-~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~~~~~i~~~a~~~~~dliV~G~~~- 99 (290)
T 3mt0_A 23 ALKRAQLIAGVTQSHLHLLVCEK-R-RDHSAALNDLAQELREEGYSVSTNQAWKDSLHQTIIAEQQAEGCGLIIKQHFP- 99 (290)
T ss_dssp HHHHHHHHHHHHCCEEEEEEECS-S-SCCHHHHHHHHHHHHHTTCCEEEEEECSSSHHHHHHHHHHHHTCSEEEEECCC-
T ss_pred HHHHHHHHHHhcCCeEEEEEeeC-c-HHHHHHHHHHHHHHhhCCCeEEEEEEeCCCHHHHHHHHHHhcCCCEEEEeccc-
Confidence 44445555555677777664433 3 222 2455667778988776432 2223332 359999999975
Q ss_pred eeCCCccc-ccchHHHHHHHhhCCCceEEecCCccc
Q 045642 279 MANGGVIA-PAGLHVLALAAKKHDVPFVVVASTHEL 313 (406)
Q Consensus 279 ~~nG~vvn-k~GT~~lAl~Ak~~~vPv~V~aes~K~ 313 (406)
.|++-. -.|+..-.+ .++.++||+++-+...+
T Consensus 100 --~~~~~~~~~gs~~~~v-l~~~~~PVlvv~~~~~~ 132 (290)
T 3mt0_A 100 --DNPLKKAILTPDDWKL-LRFAPCPVLMTKTARPW 132 (290)
T ss_dssp --SCTTSTTSCCHHHHHH-HHHCSSCEEEECCCSCS
T ss_pred --CCchhhcccCHHHHHH-HhcCCCCEEEecCCCCC
Confidence 333333 356665544 56788999999754443
No 168
>2pb2_A Acetylornithine/succinyldiaminopimelate aminotran; ARGD, pyridoxal 5'-phosphate, arginine metabolism, lysine biosynthesis, gabaculine; HET: PLP; 1.91A {Salmonella typhimurium} PDB: 2pb0_A*
Probab=54.00 E-value=1.5e+02 Score=28.47 Aligned_cols=115 Identities=17% Similarity=0.288 Sum_probs=59.8
Q ss_pred HHHHHHHHhcccCcEEEeccChHHHHHHHHHHHH-------cCCceEEEEecCCCCcchH-HHHHHHH-----hCCC---
Q 045642 188 GIAEQAMELIHQNEVILTLGHSKFVKEFLCAAKE-------KKRSFEVFIADGAPKFEGH-ILAKELD-----KKGL--- 251 (406)
Q Consensus 188 ~I~~~a~~~I~~g~~ILT~g~S~tV~~~L~~A~~-------~~~~f~ViV~EsrP~~eG~-~~a~~L~-----~~GI--- 251 (406)
.+.+..+++.....+++|.|.+..+..+++.+.. .|+ -+|++.+ |.+.|. ..+..+. ..|.
T Consensus 103 ~l~~~la~~~g~~~v~~~~ggteA~~~al~~~~~~~~~~~~~g~-~~vi~~~--~~yh~~~~~~~~~~g~~~~~~~~~p~ 179 (420)
T 2pb2_A 103 RLGRKLIDATFAERVLFMNSGTEANETAFKLARHYACVRHSPFK-TKIIAFH--NAFHGRSLFTVSVGGQPKYSDGFGPK 179 (420)
T ss_dssp HHHHHHHHHSSCSEEEEESSHHHHHHHHHHHHHHHHHHHTCTTC-CEEEEET--TCCCCSSHHHHHHSSCHHHHTTSSSC
T ss_pred HHHHHHHhhCCCCeEEEeCCHHHHHHHHHHHHHHHhhhccCCCC-CEEEEEe--CCcCCcCHHHHHhcCCccccccCCCC
Confidence 3444444455555678888888888888877653 233 3677765 555553 2222221 1111
Q ss_pred --ceEEEc--c-hHHHHHhhcCCEEEEcceeEeeCCCcc--cccchHHHHHHHhhCCCceEE
Q 045642 252 --KAIVIT--D-SAVFAMISRVNMVIVGVHAVMANGGVI--APAGLHVLALAAKKHDVPFVV 306 (406)
Q Consensus 252 --~vt~I~--D-sav~~~m~~vd~VllGAdav~~nG~vv--nk~GT~~lAl~Ak~~~vPv~V 306 (406)
.+..++ | .++-..+.+-.++|+ .+.+...||++ .+-=-..++-+|++|++++++
T Consensus 180 ~~~~~~~~~~d~~~le~~i~~~~~~vi-~~p~~~~gG~~~~~~~~l~~l~~l~~~~gi~lI~ 240 (420)
T 2pb2_A 180 PADIIHVPFNDLHAVKAVMDDHTCAVV-VEPIQGEGGVQAATPEFLKGLRDLCDEHQALLVF 240 (420)
T ss_dssp CSCEEEECTTCHHHHHHHCCTTEEEEE-ECSEETTTTSEECCHHHHHHHHHHHHHTTCEEEE
T ss_pred CCCeEEecCCCHHHHHHHhccCceEEE-EeCCcCCCCeecCCHHHHHHHHHHHHHcCCEEEE
Confidence 255554 3 233333332223333 24455455542 222224566788999998876
No 169
>2dou_A Probable N-succinyldiaminopimelate aminotransfera; PLP-dependent enzyme, structural genomics, NPPSFA; HET: EPE; 2.30A {Thermus thermophilus}
Probab=53.75 E-value=59 Score=30.47 Aligned_cols=99 Identities=14% Similarity=0.131 Sum_probs=53.1
Q ss_pred cEEEeccChHHHHHHHHHHHHcCCceEEEEecCCCCcchHHHHHHHHhCCCceEEEcc--------hHHHHHh-hcCCEE
Q 045642 201 EVILTLGHSKFVKEFLCAAKEKKRSFEVFIADGAPKFEGHILAKELDKKGLKAIVITD--------SAVFAMI-SRVNMV 271 (406)
Q Consensus 201 ~~ILT~g~S~tV~~~L~~A~~~~~~f~ViV~EsrP~~eG~~~a~~L~~~GI~vt~I~D--------sav~~~m-~~vd~V 271 (406)
.+++|.|.+..+..++....+.| -+|++. .|.+.|... .+...|.++..++- ..+-..+ ++...|
T Consensus 89 ~v~~~~g~~~a~~~~~~~l~~~g--d~vl~~--~p~y~~~~~--~~~~~g~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v 162 (376)
T 2dou_A 89 EALALIGSQEGLAHLLLALTEPE--DLLLLP--EVAYPSYFG--AARVASLRTFLIPLREDGLADLKAVPEGVWREAKVL 162 (376)
T ss_dssp SEEEESSHHHHHHHHHHHHCCTT--CEEEEE--SSCCHHHHH--HHHHTTCEEEEECBCTTSSBCGGGSCHHHHHHEEEE
T ss_pred cEEEcCCcHHHHHHHHHHhcCCC--CEEEEC--CCCcHhHHH--HHHHcCCEEEEeeCCCCCCCCHHHHHHhhccCceEE
Confidence 67888777777776666654233 355554 577777433 24457888877752 1111112 344444
Q ss_pred EEcceeEeeCCCcccccchHHHHHHHhhCCCceEE
Q 045642 272 IVGVHAVMANGGVIAPAGLHVLALAAKKHDVPFVV 306 (406)
Q Consensus 272 llGAdav~~nG~vvnk~GT~~lAl~Ak~~~vPv~V 306 (406)
++. .---+.|.+...-=-..++-.|+++++++++
T Consensus 163 ~l~-~p~nptG~~~~~~~l~~l~~~~~~~~~~li~ 196 (376)
T 2dou_A 163 LLN-YPNNPTGAVADWGYFEEALGLARKHGLWLIH 196 (376)
T ss_dssp EEC-SSCTTTCCCCCHHHHHHHHHHHHHTTCEEEE
T ss_pred EEC-CCCCCcCccCCHHHHHHHHHHHHHcCCEEEE
Confidence 443 2111223332211123566788999998876
No 170
>2xbl_A Phosphoheptose isomerase; capsule; HET: M7P PGE PG4; 1.62A {Burkholderia pseudomallei} PDB: 2x3y_A
Probab=53.37 E-value=1e+02 Score=26.11 Aligned_cols=35 Identities=14% Similarity=0.114 Sum_probs=27.7
Q ss_pred HHHHHHHHhCCCceEEEcchHHHHHhhcCCEEEEc
Q 045642 240 HILAKELDKKGLKAIVITDSAVFAMISRVNMVIVG 274 (406)
Q Consensus 240 ~~~a~~L~~~GI~vt~I~Dsav~~~m~~vd~VllG 274 (406)
...++.+++.|+++..|++..-..+.+.+|.+|.-
T Consensus 133 ~~~~~~ak~~g~~vI~IT~~~~s~L~~~ad~~l~~ 167 (198)
T 2xbl_A 133 LAAFREAKAKGMTCVGFTGNRGGEMRELCDLLLEV 167 (198)
T ss_dssp HHHHHHHHHTTCEEEEEECSCCCTHHHHCSEEEEC
T ss_pred HHHHHHHHHCCCeEEEEECCCCCcHHHhCCEEEEe
Confidence 56788888999999999987666666778887743
No 171
>1elu_A L-cysteine/L-cystine C-S lyase; FES cluster biosynthesis, pyridoxal 5'-phosphate, thiocystei aminoacrylate, enzyme-product complex; HET: PDA; 1.55A {Synechocystis SP} SCOP: c.67.1.3 PDB: 1elq_A* 1n2t_A* 1n31_A*
Probab=53.24 E-value=1.4e+02 Score=27.62 Aligned_cols=100 Identities=14% Similarity=0.174 Sum_probs=53.9
Q ss_pred CcEEEeccChHHHHHHHHHH-HHcCCceEEEEecCCCCcchHHH-HHH-HHhCCCceEEEcch-------HHHHHhhcC-
Q 045642 200 NEVILTLGHSKFVKEFLCAA-KEKKRSFEVFIADGAPKFEGHIL-AKE-LDKKGLKAIVITDS-------AVFAMISRV- 268 (406)
Q Consensus 200 g~~ILT~g~S~tV~~~L~~A-~~~~~~f~ViV~EsrP~~eG~~~-a~~-L~~~GI~vt~I~Ds-------av~~~m~~v- 268 (406)
..+++|.|.+..+..++..+ .+.| -+|++. .|.+.+... ... ....|.++..++-. -+..+-+.+
T Consensus 77 ~~v~~~~g~t~a~~~~~~~~~~~~g--d~vl~~--~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~ 152 (390)
T 1elu_A 77 NTITITDNVTTGCDIVLWGLDWHQG--DEILLT--DCEHPGIIAIVQAIAARFGITYRFFPVAATLNQGDAAAVLANHLG 152 (390)
T ss_dssp GGEEEESSHHHHHHHHHHHSCCCTT--CEEEEE--TTCCHHHHHHHHHHHHHHCCEEEEECCGGGSSSSCHHHHHHTTCC
T ss_pred HHEEEeCChHHHHHHHHhCCCCCCC--CEEEEe--cCcccHHHHHHHHHHHHhCcEEEEEcCCCCCCccchHHHHHHhcC
Confidence 36788878777777777666 3333 356654 566776432 222 34468888877632 122222211
Q ss_pred --CEEEEcceeEeeCCCcccccchHHHHHHHh----hCCCceEE
Q 045642 269 --NMVIVGVHAVMANGGVIAPAGLHVLALAAK----KHDVPFVV 306 (406)
Q Consensus 269 --d~VllGAdav~~nG~vvnk~GT~~lAl~Ak----~~~vPv~V 306 (406)
.++|+-...--..|.+.. --.++-+|+ .+++++++
T Consensus 153 ~~~~~v~~~~~~nptG~~~~---~~~i~~l~~~~~~~~~~~li~ 193 (390)
T 1elu_A 153 PKTRLVILSHLLWNTGQVLP---LAEIMAVCRRHQGNYPVRVLV 193 (390)
T ss_dssp TTEEEEEEESBCTTTCCBCC---HHHHHHHHHHCCSSSCCEEEE
T ss_pred CCceEEEEeccccCCceecC---HHHHHHHHhhhhhhcCcEEEE
Confidence 233332222222344443 346777788 88887775
No 172
>2yrr_A Aminotransferase, class V; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; HET: PLP; 1.86A {Thermus thermophilus} PDB: 2yri_A*
Probab=53.23 E-value=46 Score=30.51 Aligned_cols=96 Identities=21% Similarity=0.177 Sum_probs=52.3
Q ss_pred cEEEeccChHHHHHHHHHHHHcCCceEEEEecCCCCcchHHHHHHHHhCCCceEEEc-------c-hHHHHHhh--cCCE
Q 045642 201 EVILTLGHSKFVKEFLCAAKEKKRSFEVFIADGAPKFEGHILAKELDKKGLKAIVIT-------D-SAVFAMIS--RVNM 270 (406)
Q Consensus 201 ~~ILT~g~S~tV~~~L~~A~~~~~~f~ViV~EsrP~~eG~~~a~~L~~~GI~vt~I~-------D-sav~~~m~--~vd~ 270 (406)
.+++|.|.+..+..++..+. + -+|++. .|.+.|..+...+...|+++..++ | ..+-..+. ++..
T Consensus 54 ~v~~t~g~t~a~~~~~~~~~-~---d~vl~~--~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~~~~ 127 (353)
T 2yrr_A 54 VAALAGSGSLGMEAGLANLD-R---GPVLVL--VNGAFSQRVAEMAALHGLDPEVLDFPPGEPVDPEAVARALKRRRYRM 127 (353)
T ss_dssp EEEESSCHHHHHHHHHHTCS-C---CCEEEE--ECSHHHHHHHHHHHHTTCCEEEEECCTTSCCCHHHHHHHHHHSCCSE
T ss_pred eEEEcCCcHHHHHHHHHHhc-C---CcEEEE--cCCCchHHHHHHHHHcCCceEEEeCCCCCCCCHHHHHHHHHhCCCCE
Confidence 46666666666555555443 2 246655 334444333444566898888775 1 22333333 4444
Q ss_pred EEEcceeEeeCCCcccccchHHHHHHHhhCCCceEE
Q 045642 271 VIVGVHAVMANGGVIAPAGLHVLALAAKKHDVPFVV 306 (406)
Q Consensus 271 VllGAdav~~nG~vvnk~GT~~lAl~Ak~~~vPv~V 306 (406)
|++ ...-.+.|.+.. -..++-+|+++++++++
T Consensus 128 v~~-~~~~nptG~~~~---~~~i~~l~~~~~~~li~ 159 (353)
T 2yrr_A 128 VAL-VHGETSTGVLNP---AEAIGALAKEAGALFFL 159 (353)
T ss_dssp EEE-ESEETTTTEECC---HHHHHHHHHHHTCEEEE
T ss_pred EEE-EccCCCcceecC---HHHHHHHHHHcCCeEEE
Confidence 444 333333455443 24677788889987775
No 173
>3ele_A Amino transferase; RER070207001803, structural genomics, JOI for structural genomics, JCSG; HET: MSE PLP; 2.10A {Eubacterium rectale}
Probab=53.23 E-value=82 Score=29.65 Aligned_cols=118 Identities=17% Similarity=0.183 Sum_probs=61.6
Q ss_pred HHHHHHHHHHHHHh----cccCcEEEeccChHHHHHHHHHHHHcCCceEEEEecCCCCcchHHHHHHHHhCCCceEEEcc
Q 045642 183 NTCREGIAEQAMEL----IHQNEVILTLGHSKFVKEFLCAAKEKKRSFEVFIADGAPKFEGHILAKELDKKGLKAIVITD 258 (406)
Q Consensus 183 ~~~~~~I~~~a~~~----I~~g~~ILT~g~S~tV~~~L~~A~~~~~~f~ViV~EsrP~~eG~~~a~~L~~~GI~vt~I~D 258 (406)
...++.+++...++ +....+++|.|.+..+..++..+.+.|+ -+|++. .|.+.+.. ..+...|.++..++-
T Consensus 79 ~~lr~~la~~l~~~~g~~~~~~~i~~~~g~~~al~~~~~~l~~~g~-d~vl~~--~p~~~~~~--~~~~~~g~~~~~v~~ 153 (398)
T 3ele_A 79 VETRAAIAEFLNNTHGTHFNADNLYMTMGAAASLSICFRALTSDAY-DEFITI--APYFPEYK--VFVNAAGARLVEVPA 153 (398)
T ss_dssp HHHHHHHHHHHHHHHCCCCCGGGEEEESSHHHHHHHHHHHHCCSTT-CEEEEE--SSCCTHHH--HHHHHTTCEEEEECC
T ss_pred HHHHHHHHHHHHHHhCCCCChHHEEEccCHHHHHHHHHHHHcCCCC-CEEEEe--CCCchhhH--HHHHHcCCEEEEEec
Confidence 34455555554333 3445678887777777777776653341 355554 35566532 334467888888752
Q ss_pred h---------HHHHHh-hcCCEEEEcceeEeeCCCcccccchHHHHHHHhh------CCCceEE
Q 045642 259 S---------AVFAMI-SRVNMVIVGVHAVMANGGVIAPAGLHVLALAAKK------HDVPFVV 306 (406)
Q Consensus 259 s---------av~~~m-~~vd~VllGAdav~~nG~vvnk~GT~~lAl~Ak~------~~vPv~V 306 (406)
. .+...+ +++..|++- .---+.|.+...---..++-.|+. +++++++
T Consensus 154 ~~~~~~~d~~~l~~~l~~~~~~v~~~-~p~nptG~~~~~~~l~~l~~~~~~~~~~~~~~~~li~ 216 (398)
T 3ele_A 154 DTEHFQIDFDALEERINAHTRGVIIN-SPNNPSGTVYSEETIKKLSDLLEKKSKEIGRPIFIIA 216 (398)
T ss_dssp CTTTSSCCHHHHHHTCCTTEEEEEEC-SSCTTTCCCCCHHHHHHHHHHHHHHHHHHTSCCEEEE
T ss_pred CCcCCcCCHHHHHHHhCcCCCEEEEc-CCCCCCCCCCCHHHHHHHHHHHHhhhhccCCCeEEEE
Confidence 2 222222 233344332 211223333333333445566776 8887776
No 174
>3rht_A (gatase1)-like protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 1.83A {Planctomyces limnophilus}
Probab=53.18 E-value=11 Score=35.17 Aligned_cols=80 Identities=10% Similarity=0.076 Sum_probs=52.9
Q ss_pred EEEEecCCCCcch-HHHHHHHHhCCCceEEEcchHHH---HHhhcCCEEEEcceeEeeCCCcccccchHHHHHHHhh--C
Q 045642 227 EVFIADGAPKFEG-HILAKELDKKGLKAIVITDSAVF---AMISRVNMVIVGVHAVMANGGVIAPAGLHVLALAAKK--H 300 (406)
Q Consensus 227 ~ViV~EsrP~~eG-~~~a~~L~~~GI~vt~I~Dsav~---~~m~~vd~VllGAdav~~nG~vvnk~GT~~lAl~Ak~--~ 300 (406)
+|.++++....+| ..+.+.|.+.|++|+++....+. .-+.+.|.||++ |. -. +...-.++..+.+. .
T Consensus 6 ~vLiV~g~~~~~~a~~l~~aL~~~g~~V~~i~~~~~~~~~~~L~~yDvIIl~-d~-~~-----~~l~~~~~~~L~~yV~~ 78 (259)
T 3rht_A 6 RVLYCGDTSLETAAGYLAGLMTSWQWEFDYIPSHVGLDVGELLAKQDLVILS-DY-PA-----ERMTAQAIDQLVTMVKA 78 (259)
T ss_dssp CEEEEESSCTTTTHHHHHHHHHHTTCCCEEECTTSCBCSSHHHHTCSEEEEE-SC-CG-----GGBCHHHHHHHHHHHHT
T ss_pred eEEEECCCCchhHHHHHHHHHHhCCceEEEecccccccChhHHhcCCEEEEc-CC-cc-----ccCCHHHHHHHHHHHHh
Confidence 5677777665555 57888999999999999987763 568899999997 21 11 12233333333332 4
Q ss_pred CCceEEecCCccc
Q 045642 301 DVPFVVVASTHEL 313 (406)
Q Consensus 301 ~vPv~V~aes~K~ 313 (406)
|-=++++.+...|
T Consensus 79 GGgLi~~gG~~s~ 91 (259)
T 3rht_A 79 GCGLVMLGGWESY 91 (259)
T ss_dssp TCEEEEECSTTSS
T ss_pred CCeEEEecCcccc
Confidence 7778887654444
No 175
>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*
Probab=53.16 E-value=70 Score=29.02 Aligned_cols=97 Identities=14% Similarity=0.209 Sum_probs=60.9
Q ss_pred cCcEEEeccChHHHHHHHHHHHHcCCceEEEEecCCCCcchHHHHHHHHhCCCceEEE-cc----hHHHHHhh-------
Q 045642 199 QNEVILTLGHSKFVKEFLCAAKEKKRSFEVFIADGAPKFEGHILAKELDKKGLKAIVI-TD----SAVFAMIS------- 266 (406)
Q Consensus 199 ~g~~ILT~g~S~tV~~~L~~A~~~~~~f~ViV~EsrP~~eG~~~a~~L~~~GI~vt~I-~D----sav~~~m~------- 266 (406)
.|.++|+.|.|+-+=..+..... .+..+|+++..+.......+++++.+.|-.+.++ .| .++..++.
T Consensus 27 ~~k~vlVTGas~gIG~aia~~la-~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~v~~~~~~~~~~~g 105 (269)
T 4dmm_A 27 TDRIALVTGASRGIGRAIALELA-AAGAKVAVNYASSAGAADEVVAAIAAAGGEAFAVKADVSQESEVEALFAAVIERWG 105 (269)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHH-HTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEECCCCHHHHHHHHHHH-HCCCEEEEEeCCChHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 57788888888877666654431 2346788877655444567788888888777655 33 23444443
Q ss_pred cCCEEEEcceeEeeCCCc-------------ccccchHHHHHHH
Q 045642 267 RVNMVIVGVHAVMANGGV-------------IAPAGLHVLALAA 297 (406)
Q Consensus 267 ~vd~VllGAdav~~nG~v-------------vnk~GT~~lAl~A 297 (406)
++|.+|--|- +...+.+ +|-.|++.++.++
T Consensus 106 ~id~lv~nAg-~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~ 148 (269)
T 4dmm_A 106 RLDVLVNNAG-ITRDTLLLRMKRDDWQSVLDLNLGGVFLCSRAA 148 (269)
T ss_dssp CCCEEEECCC-CCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHH
T ss_pred CCCEEEECCC-CCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHH
Confidence 6788777663 3333322 3667888777655
No 176
>3ilh_A Two component response regulator; NYSGXRC, PSI-II, protein S initiative, structural genomics; 2.59A {Cytophaga hutchinsonii}
Probab=52.69 E-value=66 Score=25.06 Aligned_cols=58 Identities=14% Similarity=0.083 Sum_probs=42.2
Q ss_pred EEEeccChHHHHHHHHHHHHcCCceEEEEecCC-CCcchHHHHHHHHh------CCCceEEEcch
Q 045642 202 VILTLGHSKFVKEFLCAAKEKKRSFEVFIADGA-PKFEGHILAKELDK------KGLKAIVITDS 259 (406)
Q Consensus 202 ~ILT~g~S~tV~~~L~~A~~~~~~f~ViV~Esr-P~~eG~~~a~~L~~------~GI~vt~I~Ds 259 (406)
.|.+..........+......+..+.+++++-. |...|..+++.|.+ ..+++.+++..
T Consensus 37 ~v~~~~~~~~a~~~l~~~~~~~~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~~~~~ii~~t~~ 101 (146)
T 3ilh_A 37 EIQSVTSGNAAINKLNELYAAGRWPSIICIDINMPGINGWELIDLFKQHFQPMKNKSIVCLLSSS 101 (146)
T ss_dssp EEEEESSHHHHHHHHHHHHTSSCCCSEEEEESSCSSSCHHHHHHHHHHHCGGGTTTCEEEEECSS
T ss_pred eeeecCCHHHHHHHHHHhhccCCCCCEEEEcCCCCCCCHHHHHHHHHHhhhhccCCCeEEEEeCC
Confidence 566677776677777665555677888988854 78899999999987 35666666543
No 177
>1ajs_A Aspartate aminotransferase; PIG, in the presence of ligand 2-methylaspartate; HET: LLP PLA; 1.60A {Sus scrofa} SCOP: c.67.1.1 PDB: 1ajr_A* 3ii0_A* 1aat_A 2cst_A*
Probab=52.54 E-value=86 Score=29.72 Aligned_cols=104 Identities=13% Similarity=0.115 Sum_probs=53.8
Q ss_pred cCcEEE--eccChHHHHHHHHH--HHHcCC---ceEEEEecCCCCcchHHHHHHHHhCCCc-eEEEcc----------hH
Q 045642 199 QNEVIL--TLGHSKFVKEFLCA--AKEKKR---SFEVFIADGAPKFEGHILAKELDKKGLK-AIVITD----------SA 260 (406)
Q Consensus 199 ~g~~IL--T~g~S~tV~~~L~~--A~~~~~---~f~ViV~EsrP~~eG~~~a~~L~~~GI~-vt~I~D----------sa 260 (406)
...+++ |.|.+..+..+++. ....|+ .-+|++. .|.+.|.. ..+...|++ +..++- ..
T Consensus 97 ~~~v~~~~t~gg~~a~~~~~~~~~~~~~g~~~~~d~Vl~~--~p~y~~~~--~~~~~~g~~~~~~~~~~~~~~~~~d~~~ 172 (412)
T 1ajs_A 97 EKRVGGVQSLGGTGALRIGAEFLARWYNGTNNKDTPVYVS--SPTWENHN--GVFTTAGFKDIRSYRYWDTEKRGLDLQG 172 (412)
T ss_dssp TTCEEEEEEEHHHHHHHHHHHHHHHHSSSSSCCCSCEEEE--ESCCTHHH--HHHHHTTCSCEEEEECEETTTTEECHHH
T ss_pred CCcEEEEECCCcHHHHHHHHHHHHHhCcCcCCCCCeEEEc--CCCcHHHH--HHHHHcCCceeEEEeeecCCCCccCHHH
Confidence 456777 88877777777542 232331 0346655 36666643 334456887 766542 12
Q ss_pred HHHHhhc---CCEEEEcceeEeeCCCcccccchHHHHHHHhhCCCceEE
Q 045642 261 VFAMISR---VNMVIVGVHAVMANGGVIAPAGLHVLALAAKKHDVPFVV 306 (406)
Q Consensus 261 v~~~m~~---vd~VllGAdav~~nG~vvnk~GT~~lAl~Ak~~~vPv~V 306 (406)
+-..+.+ -+++++-+..--+.|.+...-=-..++-.|+.+++.+++
T Consensus 173 l~~~l~~~~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~ 221 (412)
T 1ajs_A 173 FLSDLENAPEFSIFVLHACAHNPTGTDPTPEQWKQIASVMKRRFLFPFF 221 (412)
T ss_dssp HHHHHHHSCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEE
T ss_pred HHHHHHhCCCCcEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEE
Confidence 3333332 123433232222233333221122577788899988776
No 178
>3fsl_A Aromatic-amino-acid aminotransferase; tyrosine aminotransferase, pyridoxal phosphate, internal ALD schiff base, amino-acid biosynthesis; HET: PLR; 2.35A {Escherichia coli k-12} SCOP: c.67.1.1 PDB: 3tat_A*
Probab=52.54 E-value=1.4e+02 Score=27.89 Aligned_cols=100 Identities=15% Similarity=0.137 Sum_probs=52.4
Q ss_pred cEEEeccChHHHHHHHHH--HHHcCCceEEEEecCCCCcchHHHHHHHHhCCCceEEEcc----------hHHHHHhhc-
Q 045642 201 EVILTLGHSKFVKEFLCA--AKEKKRSFEVFIADGAPKFEGHILAKELDKKGLKAIVITD----------SAVFAMISR- 267 (406)
Q Consensus 201 ~~ILT~g~S~tV~~~L~~--A~~~~~~f~ViV~EsrP~~eG~~~a~~L~~~GI~vt~I~D----------sav~~~m~~- 267 (406)
.+++|.|.+..+..+++. ....| -+|++. .|.+.+. ...+...|.++..++- ..+-..+.+
T Consensus 97 ~i~~t~g~~~a~~~~~~~~~~~~~g--d~vl~~--~p~~~~~--~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~ 170 (397)
T 3fsl_A 97 ATIQTLGGSGALKVGADFLKRYFPE--SGVWVS--DPTWENH--VAIFAGAGFEVSTYPWYDEATNGVRFNDLLATLKTL 170 (397)
T ss_dssp EEEEESHHHHHHHHHHHHHHHHCTT--CCEEEE--SSCCHHH--HHHHHHTTCCEEEECCEETTTTEECHHHHHHHHTTC
T ss_pred EEEEcCCcHHHHHHHHHHHHhcCCC--CeEEEe--CCCchhH--HHHHHHcCCceEEEeeeeccCCcCcHHHHHHHHHhC
Confidence 567888877777666432 23233 245554 4666664 3334457888777752 133334432
Q ss_pred --CCEEEEcceeEeeCCCcccccchHHHHHHHhhCCCceEE
Q 045642 268 --VNMVIVGVHAVMANGGVIAPAGLHVLALAAKKHDVPFVV 306 (406)
Q Consensus 268 --vd~VllGAdav~~nG~vvnk~GT~~lAl~Ak~~~vPv~V 306 (406)
-+++++=...--+.|.+...---..++-.|+++++.+++
T Consensus 171 ~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~ 211 (397)
T 3fsl_A 171 QAGSIVLLHPCCHNPTGADLTNDQWDAVIEILKARELIPFL 211 (397)
T ss_dssp CTTCEEEECSSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEE
T ss_pred CCCCEEEEeCCCCCCCCcCCCHHHHHHHHHHHHhCCEEEEE
Confidence 223333222112223333322223677788999988876
No 179
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=52.49 E-value=71 Score=29.07 Aligned_cols=109 Identities=11% Similarity=0.159 Sum_probs=67.5
Q ss_pred HHHHHHHhcccCcEEEeccChHHHHHHHHHHHHcCCceEEEEecCCC---------C---------cchHHHHHHHHhC-
Q 045642 189 IAEQAMELIHQNEVILTLGHSKFVKEFLCAAKEKKRSFEVFIADGAP---------K---------FEGHILAKELDKK- 249 (406)
Q Consensus 189 I~~~a~~~I~~g~~ILT~g~S~tV~~~L~~A~~~~~~f~ViV~EsrP---------~---------~eG~~~a~~L~~~- 249 (406)
+...+.+.+. +..|+..|...+=..+++.....|.. ++.+++... . .....+++.|.+.
T Consensus 18 ~g~~~q~~l~-~~~VlvvG~GglG~~va~~La~~Gvg-~i~lvD~d~v~~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~n 95 (251)
T 1zud_1 18 IALDGQQKLL-DSQVLIIGLGGLGTPAALYLAGAGVG-TLVLADDDDVHLSNLQRQILFTTEDIDRPKSQVSQQRLTQLN 95 (251)
T ss_dssp THHHHHHHHH-TCEEEEECCSTTHHHHHHHHHHTTCS-EEEEECCCBCCGGGTTTCTTCCGGGTTSBHHHHHHHHHHHHC
T ss_pred cCHHHHHHHh-cCcEEEEccCHHHHHHHHHHHHcCCC-eEEEEeCCCcccccCCCCccCChhhCCCHHHHHHHHHHHHHC
Confidence 3444555554 45777777766555666666656643 445554322 1 1124567777764
Q ss_pred -CCceEEEc----chHHHHHhhcCCEEEEcceeEeeCCCcccccchHHHHHHHhhCCCceEEec
Q 045642 250 -GLKAIVIT----DSAVFAMISRVNMVIVGVHAVMANGGVIAPAGLHVLALAAKKHDVPFVVVA 308 (406)
Q Consensus 250 -GI~vt~I~----Dsav~~~m~~vd~VllGAdav~~nG~vvnk~GT~~lAl~Ak~~~vPv~V~a 308 (406)
+++++.+. +..+..+++++|.||...|..- .-+.+.-+|+.+++|++..+
T Consensus 96 p~~~v~~~~~~~~~~~~~~~~~~~DvVi~~~d~~~---------~r~~l~~~~~~~~~p~i~~~ 150 (251)
T 1zud_1 96 PDIQLTALQQRLTGEALKDAVARADVVLDCTDNMA---------TRQEINAACVALNTPLITAS 150 (251)
T ss_dssp TTSEEEEECSCCCHHHHHHHHHHCSEEEECCSSHH---------HHHHHHHHHHHTTCCEEEEE
T ss_pred CCCEEEEEeccCCHHHHHHHHhcCCEEEECCCCHH---------HHHHHHHHHHHhCCCEEEEe
Confidence 56676654 3355667889999998876431 23567778888999987754
No 180
>1e5e_A MGL, methionine gamma-lyase; methionine biosynthesis, PLP-dependent enzymes, C-S gamma lyase; HET: PPJ; 2.18A {Trichomonas vaginalis} SCOP: c.67.1.3 PDB: 1e5f_A*
Probab=52.38 E-value=1.2e+02 Score=29.05 Aligned_cols=99 Identities=10% Similarity=0.037 Sum_probs=53.4
Q ss_pred cEEEeccChHHHHHHHHHHHHcCCceEEEEecCCCCcchH-HHHH-HHHhCCCceEEEcc---hHHHHHhhcCCEEEEcc
Q 045642 201 EVILTLGHSKFVKEFLCAAKEKKRSFEVFIADGAPKFEGH-ILAK-ELDKKGLKAIVITD---SAVFAMISRVNMVIVGV 275 (406)
Q Consensus 201 ~~ILT~g~S~tV~~~L~~A~~~~~~f~ViV~EsrP~~eG~-~~a~-~L~~~GI~vt~I~D---sav~~~m~~vd~VllGA 275 (406)
+.|++.|.+..+..++....+.| -+|++. .|.+.+. .... .+...|+++..++- ..+...+..-+++|+-.
T Consensus 79 ~~i~~~~g~~ai~~~~~~l~~~g--d~Vl~~--~~~y~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~i~~~t~~v~l~ 154 (404)
T 1e5e_A 79 ACVATSSGMGAIAATVLTILKAG--DHLISD--ECLYGCTHALFEHALTKFGIQVDFINTAIPGEVKKHMKPNTKIVYFE 154 (404)
T ss_dssp EEEEESSHHHHHHHHHHHHCCTT--CEEEEE--SCCCHHHHHHHHTHHHHTTCEEEEECTTSTTHHHHHCCTTEEEEEEE
T ss_pred cEEEeCChHHHHHHHHHHHhCCC--CEEEEe--CCCchhHHHHHHHHHHHcCCEEEEECCCCHHHHHHhcCCCCcEEEEE
Confidence 56666666655555554443333 356654 5666663 3222 46678999998863 23333343222333322
Q ss_pred eeEeeCCCcccccchHHHHHHHhh-CCCceEE
Q 045642 276 HAVMANGGVIAPAGLHVLALAAKK-HDVPFVV 306 (406)
Q Consensus 276 dav~~nG~vvnk~GT~~lAl~Ak~-~~vPv~V 306 (406)
.---..|.+.. -..++-+|++ ++++|++
T Consensus 155 ~p~NptG~v~~---l~~i~~la~~~~~~~li~ 183 (404)
T 1e5e_A 155 TPANPTLKIID---MERVCKDAHSQEGVLVIA 183 (404)
T ss_dssp SSCTTTCCCCC---HHHHHHHHHTSTTCEEEE
T ss_pred CCCCCCCcccC---HHHHHHHHHhhcCCEEEE
Confidence 11122333332 3567788999 9998876
No 181
>2dr1_A PH1308 protein, 386AA long hypothetical serine aminotransferase; PLP, structural genomics, NPPSFA; HET: PLP; 1.90A {Pyrococcus horikoshii}
Probab=52.36 E-value=1.5e+02 Score=27.49 Aligned_cols=97 Identities=20% Similarity=0.217 Sum_probs=56.4
Q ss_pred EEEeccChHHHHHHHHHHHHcCCceEEEEecCCCCcchHHHHHHHHhCCCceEEEcc--------hHHHHHh---hcCCE
Q 045642 202 VILTLGHSKFVKEFLCAAKEKKRSFEVFIADGAPKFEGHILAKELDKKGLKAIVITD--------SAVFAMI---SRVNM 270 (406)
Q Consensus 202 ~ILT~g~S~tV~~~L~~A~~~~~~f~ViV~EsrP~~eG~~~a~~L~~~GI~vt~I~D--------sav~~~m---~~vd~ 270 (406)
+++|.|.+..+..++..+.+.| -+|++. .|.+.|......+...|.++..++- ..+-..+ +++..
T Consensus 74 v~~~~g~t~a~~~~~~~l~~~g--d~vl~~--~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~~~~~ 149 (386)
T 2dr1_A 74 LLVPSSGTGIMEASIRNGVSKG--GKVLVT--IIGAFGKRYKEVVESNGRKAVVLEYEPGKAVKPEDLDDALRKNPDVEA 149 (386)
T ss_dssp EEESSCHHHHHHHHHHHHSCTT--CEEEEE--ESSHHHHHHHHHHHHTTCEEEEEECCTTCCCCHHHHHHHHHHCTTCCE
T ss_pred EEEeCChHHHHHHHHHHhhcCC--CeEEEE--cCCchhHHHHHHHHHhCCceEEEecCCCCCCCHHHHHHHHhcCCCCcE
Confidence 5667776766666666654333 356665 4566664455556678888776642 2333344 34545
Q ss_pred EEEcceeEeeCCCcccccchHHHHHHHhhCCCceEE
Q 045642 271 VIVGVHAVMANGGVIAPAGLHVLALAAKKHDVPFVV 306 (406)
Q Consensus 271 VllGAdav~~nG~vvnk~GT~~lAl~Ak~~~vPv~V 306 (406)
|++- ..--..|.+. . --.++-+|+++++++++
T Consensus 150 v~~~-~~~nptG~~~-~--l~~i~~l~~~~~~~li~ 181 (386)
T 2dr1_A 150 VTIT-YNETSTGVLN-P--LPELAKVAKEHDKLVFV 181 (386)
T ss_dssp EEEE-SEETTTTEEC-C--HHHHHHHHHHTTCEEEE
T ss_pred EEEE-eecCCcchhC-C--HHHHHHHHHHcCCeEEE
Confidence 5543 2222334433 2 36677888999998876
No 182
>4gud_A Imidazole glycerol phosphate synthase subunit His; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE 1PE; 1.91A {Vibrio cholerae}
Probab=52.33 E-value=34 Score=29.90 Aligned_cols=75 Identities=15% Similarity=0.196 Sum_probs=45.9
Q ss_pred EEEEecCCCCcch--HHHHHHHHhCCCceEEEcchHHHHHhhcCCEEEEcceeEeeCCCcccccchHH----HHHHHhhC
Q 045642 227 EVFIADGAPKFEG--HILAKELDKKGLKAIVITDSAVFAMISRVNMVIVGVHAVMANGGVIAPAGLHV----LALAAKKH 300 (406)
Q Consensus 227 ~ViV~EsrP~~eG--~~~a~~L~~~GI~vt~I~Dsav~~~m~~vd~VllGAdav~~nG~vvnk~GT~~----lAl~Ak~~ 300 (406)
+|.|++- .-| +.+++.|.+.|++++++.|.. -+..+|.+|+. -|+-....+... +...+++.
T Consensus 4 ~I~iiD~---g~~n~~si~~al~~~G~~~~v~~~~~---~l~~~D~lilP------G~g~~~~~~~~~~~~~~i~~~~~~ 71 (211)
T 4gud_A 4 NVVIIDT---GCANISSVKFAIERLGYAVTISRDPQ---VVLAADKLFLP------GVGTASEAMKNLTERDLIELVKRV 71 (211)
T ss_dssp CEEEECC---CCTTHHHHHHHHHHTTCCEEEECCHH---HHHHCSEEEEC------CCSCHHHHHHHHHHTTCHHHHHHC
T ss_pred EEEEEEC---CCChHHHHHHHHHHCCCEEEEECCHH---HHhCCCEEEEC------CCCCHHHHHHHHHhcChHHHHHHc
Confidence 3555553 233 578899999999999988754 35678887762 122221111111 12345678
Q ss_pred CCceEEecCCccc
Q 045642 301 DVPFVVVASTHEL 313 (406)
Q Consensus 301 ~vPv~V~aes~K~ 313 (406)
++||+-+|=-+-+
T Consensus 72 ~~PvlGIClG~Ql 84 (211)
T 4gud_A 72 EKPLLGICLGMQL 84 (211)
T ss_dssp CSCEEEETHHHHT
T ss_pred CCCEEEEchhHhH
Confidence 9999998855444
No 183
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=52.15 E-value=29 Score=34.53 Aligned_cols=71 Identities=20% Similarity=0.212 Sum_probs=42.0
Q ss_pred CcEEEeccChHHHHHHHHHHHHcCCceEEEEecCCCCcchHHHHHHHHhCCCceEEEcchHHHHHhhc-CCEEEEcc
Q 045642 200 NEVILTLGHSKFVKEFLCAAKEKKRSFEVFIADGAPKFEGHILAKELDKKGLKAIVITDSAVFAMISR-VNMVIVGV 275 (406)
Q Consensus 200 g~~ILT~g~S~tV~~~L~~A~~~~~~f~ViV~EsrP~~eG~~~a~~L~~~GI~vt~I~Dsav~~~m~~-vd~VllGA 275 (406)
|..|+.+|-..+=...-+.+.+ +.++|.+.|.++..+. .+.+.|.+.||++.+-.+.. ..+.. +|.||++.
T Consensus 9 ~k~v~viG~G~sG~s~A~~l~~--~G~~V~~~D~~~~~~~-~~~~~L~~~gi~~~~g~~~~--~~~~~~~d~vv~sp 80 (451)
T 3lk7_A 9 NKKVLVLGLARSGEAAARLLAK--LGAIVTVNDGKPFDEN-PTAQSLLEEGIKVVCGSHPL--ELLDEDFCYMIKNP 80 (451)
T ss_dssp TCEEEEECCTTTHHHHHHHHHH--TTCEEEEEESSCGGGC-HHHHHHHHTTCEEEESCCCG--GGGGSCEEEEEECT
T ss_pred CCEEEEEeeCHHHHHHHHHHHh--CCCEEEEEeCCcccCC-hHHHHHHhCCCEEEECCChH--HhhcCCCCEEEECC
Confidence 5566665543222223233333 3588999999875332 34568999999887655432 23345 77777764
No 184
>3zrp_A Serine-pyruvate aminotransferase (AGXT); HET: PLP; 1.75A {Sulfolobus solfataricus} PDB: 3zrq_A* 3zrr_A*
Probab=52.02 E-value=64 Score=29.95 Aligned_cols=98 Identities=11% Similarity=0.104 Sum_probs=54.0
Q ss_pred cEEEeccChHHHHHHHHHHHHcCCceEEEEecCCCCcchHHHHHHHHhCCCceEEEcc--------hHHHHHhhc-CCEE
Q 045642 201 EVILTLGHSKFVKEFLCAAKEKKRSFEVFIADGAPKFEGHILAKELDKKGLKAIVITD--------SAVFAMISR-VNMV 271 (406)
Q Consensus 201 ~~ILT~g~S~tV~~~L~~A~~~~~~f~ViV~EsrP~~eG~~~a~~L~~~GI~vt~I~D--------sav~~~m~~-vd~V 271 (406)
.+++|.|.+..+. ++..+.+ ..-+|++.+ |.+-|..+...+...|+++..++- ..+-..+.+ -.++
T Consensus 56 ~v~~~~g~t~al~-~~~~~~~--~gd~vi~~~--~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~ 130 (384)
T 3zrp_A 56 PLIIPGGGTSAME-SVTSLLK--PNDKILVVS--NGVFGDRWEQIFKRYPVNVKVLRPSPGDYVKPGEVEEEVRKSEYKL 130 (384)
T ss_dssp EEEEESCHHHHHH-HGGGGCC--TTCEEEEEC--SSHHHHHHHHHHTTSSCEEEEECCSTTCCCCHHHHHHHHHHSCEEE
T ss_pred EEEEcCCcHHHHH-HHHhhcC--CCCEEEEec--CCcchHHHHHHHHHcCCcEEEecCCCCCCCCHHHHHHHHHhCCCcE
Confidence 3677777777777 6665542 233566653 344444444445667988887752 233333433 2333
Q ss_pred EEcceeEeeCCCcccccchHHHHHHHhhCCCceEE
Q 045642 272 IVGVHAVMANGGVIAPAGLHVLALAAKKHDVPFVV 306 (406)
Q Consensus 272 llGAdav~~nG~vvnk~GT~~lAl~Ak~~~vPv~V 306 (406)
++-...=-..|.+. . --.++-+|++|++++++
T Consensus 131 v~~~~~~nptG~~~-~--l~~i~~l~~~~~~~li~ 162 (384)
T 3zrp_A 131 VALTHVETSTGVRE-P--VKDVINKIRKYVELIVV 162 (384)
T ss_dssp EEEESEETTTTEEC-C--HHHHHHHHGGGEEEEEE
T ss_pred EEEeCCCCCCceEC-c--HHHHHHHHHhcCCEEEE
Confidence 33332222233333 3 34577789999987776
No 185
>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*
Probab=51.95 E-value=29 Score=31.81 Aligned_cols=99 Identities=18% Similarity=0.288 Sum_probs=59.3
Q ss_pred cCcEEEeccChHHHHHHHHHH-HHcCCceEEEEecCCCCcchHHHHHHHHhCCCceEEE-cc----hHHHHHh-------
Q 045642 199 QNEVILTLGHSKFVKEFLCAA-KEKKRSFEVFIADGAPKFEGHILAKELDKKGLKAIVI-TD----SAVFAMI------- 265 (406)
Q Consensus 199 ~g~~ILT~g~S~tV~~~L~~A-~~~~~~f~ViV~EsrP~~eG~~~a~~L~~~GI~vt~I-~D----sav~~~m------- 265 (406)
.|.++|+.|.|+-+=..+... .++ ..+|+++..++......++++|.+.|.++.++ .| ..+..++
T Consensus 28 ~~k~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 105 (283)
T 1g0o_A 28 EGKVALVTGAGRGIGREMAMELGRR--GCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEAVKIF 105 (283)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHT--TCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEeCCchHHHHHHHHHHHHhCCCeEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 467888888888776655444 333 46788876654333345677788878776655 34 2233333
Q ss_pred hcCCEEEEcceeEeeCCCc-------------ccccchHHHHHHHhhC
Q 045642 266 SRVNMVIVGVHAVMANGGV-------------IAPAGLHVLALAAKKH 300 (406)
Q Consensus 266 ~~vd~VllGAdav~~nG~v-------------vnk~GT~~lAl~Ak~~ 300 (406)
.++|.||-.|- +...+.+ +|-.|++.++-++..+
T Consensus 106 g~iD~lv~~Ag-~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~ 152 (283)
T 1g0o_A 106 GKLDIVCSNSG-VVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKH 152 (283)
T ss_dssp SCCCEEEECCC-CCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred CCCCEEEECCC-cCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 25777776653 2222221 3567888887766654
No 186
>1u08_A Hypothetical aminotransferase YBDL; alpha beta protein; HET: PLP; 2.35A {Escherichia coli} SCOP: c.67.1.1
Probab=51.89 E-value=1.5e+02 Score=27.60 Aligned_cols=110 Identities=20% Similarity=0.257 Sum_probs=59.3
Q ss_pred HHHHHHHHHHHHHh----cccC-cEEEeccChHHHHHHHHHHHHcCCceEEEEecCCCCcchHHHHHHHHhCCCceEEEc
Q 045642 183 NTCREGIAEQAMEL----IHQN-EVILTLGHSKFVKEFLCAAKEKKRSFEVFIADGAPKFEGHILAKELDKKGLKAIVIT 257 (406)
Q Consensus 183 ~~~~~~I~~~a~~~----I~~g-~~ILT~g~S~tV~~~L~~A~~~~~~f~ViV~EsrP~~eG~~~a~~L~~~GI~vt~I~ 257 (406)
...++.+++...++ +... .+++|.|.+..+..++..+.+.| -+|++.+ |.+.|.. ..+...|..+..++
T Consensus 70 ~~l~~~la~~l~~~~g~~~~~~~~v~~~~g~~~a~~~~~~~~~~~g--d~vl~~~--p~~~~~~--~~~~~~g~~~~~v~ 143 (386)
T 1u08_A 70 QALREAIAQKTERLYGYQPDADSDITVTAGATEALYAAITALVRNG--DEVICFD--PSYDSYA--PAIALSGGIVKRMA 143 (386)
T ss_dssp HHHHHHHHHHHHHHHSCCCCTTTTEEEESSHHHHHHHHHHHHCCTT--CEEEEEE--SCCTTHH--HHHHHTTCEEEEEE
T ss_pred HHHHHHHHHHHHHHhCCCCCCCCCEEEcCChHHHHHHHHHHhCCCC--CEEEEeC--CCchhHH--HHHHHcCCEEEEee
Confidence 34445555554332 2234 67888777777777776664333 3566654 5555533 23455788877764
Q ss_pred ch---------HHHHHhh-cCCEEEEcceeEeeCCCcccccch-------HHHHHHHhhCCCceEE
Q 045642 258 DS---------AVFAMIS-RVNMVIVGVHAVMANGGVIAPAGL-------HVLALAAKKHDVPFVV 306 (406)
Q Consensus 258 Ds---------av~~~m~-~vd~VllGAdav~~nG~vvnk~GT-------~~lAl~Ak~~~vPv~V 306 (406)
-. .+-..+. ++..|++. ..-|..|. ..++-.|+++++.+++
T Consensus 144 ~~~~~~~~d~~~l~~~l~~~~~~v~l~--------~p~nptG~~~~~~~l~~i~~~~~~~~~~li~ 201 (386)
T 1u08_A 144 LQPPHFRVDWQEFAALLSERTRLVILN--------TPHNPSATVWQQADFAALWQAIAGHEIFVIS 201 (386)
T ss_dssp CCTTTCCCCHHHHHHHCCTTEEEEEEE--------SSCTTTCCCCCHHHHHHHHHHHTTSCCEEEE
T ss_pred cCcccCcCCHHHHHHhhcccCEEEEEe--------CCCCCCCccCCHHHHHHHHHHHHHcCcEEEE
Confidence 21 1222222 23333331 22344444 4567788899988776
No 187
>1fc4_A 2-amino-3-ketobutyrate conenzyme A ligase; 2-amino-3-ketobutyrate COA ligase, pyridoxal phosphate, COEN transferase, structural genomics; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.4
Probab=51.85 E-value=1.3e+02 Score=28.23 Aligned_cols=110 Identities=13% Similarity=0.035 Sum_probs=58.4
Q ss_pred HHHHHHHHHHHHHhcccCcEEEeccChHHHHHHHHHHHHcCCceEEEEecCCCCcchHHHHHHHHhCCCceEEEc--c-h
Q 045642 183 NTCREGIAEQAMELIHQNEVILTLGHSKFVKEFLCAAKEKKRSFEVFIADGAPKFEGHILAKELDKKGLKAIVIT--D-S 259 (406)
Q Consensus 183 ~~~~~~I~~~a~~~I~~g~~ILT~g~S~tV~~~L~~A~~~~~~f~ViV~EsrP~~eG~~~a~~L~~~GI~vt~I~--D-s 259 (406)
....+.|++. +.-.+.|++.+.+..+..++..+. ++.-.|++. .|.+.+. ...+...|+++..++ | .
T Consensus 93 ~~l~~~la~~----~g~~~~i~~~sGs~a~~~~~~~~~--~~gd~v~~~--~~~~~~~--~~~~~~~g~~~~~~~~~d~~ 162 (401)
T 1fc4_A 93 KELEQKLAAF----LGMEDAILYSSCFDANGGLFETLL--GAEDAIISD--ALNHASI--IDGVRLCKAKRYRYANNDMQ 162 (401)
T ss_dssp HHHHHHHHHH----HTCSEEEEESCHHHHHHTTHHHHC--CTTCEEEEE--TTCCHHH--HHHHHTSCSEEEEECTTCHH
T ss_pred HHHHHHHHHH----hCCCcEEEeCChHHHHHHHHHHHc--CCCCEEEEc--chhHHHH--HHHHHHcCCceEEECCCCHH
Confidence 3444455543 332256666555666665555543 333355553 3444332 234667899888885 3 2
Q ss_pred HHHHHhh-------cCCEEEEcceeEeeCCCcccccchHHHHHHHhhCCCceEE
Q 045642 260 AVFAMIS-------RVNMVIVGVHAVMANGGVIAPAGLHVLALAAKKHDVPFVV 306 (406)
Q Consensus 260 av~~~m~-------~vd~VllGAdav~~nG~vvnk~GT~~lAl~Ak~~~vPv~V 306 (406)
.+-..+. ++..|++ ...--..|.+.. -..++-+|+.+++++++
T Consensus 163 ~l~~~l~~~~~~~~~~~~v~~-~~~~nptG~~~~---~~~i~~l~~~~~~~li~ 212 (401)
T 1fc4_A 163 ELEARLKEAREAGARHVLIAT-DGVFSMDGVIAN---LKGVCDLADKYDALVMV 212 (401)
T ss_dssp HHHHHHHHHHHTTCSSEEEEE-ESEETTTTEECC---HHHHHHHHHHTTEEEEE
T ss_pred HHHHHHHHhhccCCCceEEEE-eCCcCCCCCCCC---HHHHHHHHHHcCCEEEE
Confidence 3333343 3444444 322233344443 46677888999987775
No 188
>3cwc_A Putative glycerate kinase 2; structural genomics, center for structural genomics of infec diseases, csgid, IDP122, transferase; 2.23A {Salmonella typhimurium LT2}
Probab=51.71 E-value=8.7 Score=38.08 Aligned_cols=50 Identities=20% Similarity=0.191 Sum_probs=33.4
Q ss_pred HHHHhhcCCEEEEcceeEeeCCCcccccchHHHHHHHhhCCCceEEecCCcc
Q 045642 261 VFAMISRVNMVIVGVHAVMANGGVIAPAGLHVLALAAKKHDVPFVVVASTHE 312 (406)
Q Consensus 261 v~~~m~~vd~VllGAdav~~nG~vvnk~GT~~lAl~Ak~~~vPv~V~aes~K 312 (406)
.-..++++|.||.|==++-. -...----.-+|-.||.|+|||+++|.+..
T Consensus 281 l~~~l~~ADLVITGEG~~D~--Qtl~GK~p~gVa~~A~~~~vPviaiaG~~~ 330 (383)
T 3cwc_A 281 LEACLADADLVITGEGRIDS--QTIHGKVPIGVANIAKRYNKPVIGIAGSLT 330 (383)
T ss_dssp HHHHHHHCSEEEECCEESCC------CHHHHHHHHHHHHTTCCEEEEEEECC
T ss_pred hHhhhcCCCEEEECCCCCcC--cCCCCcHHHHHHHHHHHhCCCEEEEeCCCC
Confidence 34567789999999644322 122212235577889999999999998754
No 189
>2fq6_A Cystathionine beta-lyase; protein-inhibitor complex, PLP cofactor covalently bound to inhibitor; HET: P3F; 1.78A {Escherichia coli} SCOP: c.67.1.3 PDB: 2gqn_A* 1cl1_A* 1cl2_A*
Probab=51.68 E-value=34 Score=33.58 Aligned_cols=99 Identities=12% Similarity=0.105 Sum_probs=50.4
Q ss_pred cEEEeccChHHHHHHHHHHHHcCCceEEEEecCCCCcchH-HHH-HHHHhCCCceEEEcc---hHHHHHhhcCCEEEEcc
Q 045642 201 EVILTLGHSKFVKEFLCAAKEKKRSFEVFIADGAPKFEGH-ILA-KELDKKGLKAIVITD---SAVFAMISRVNMVIVGV 275 (406)
Q Consensus 201 ~~ILT~g~S~tV~~~L~~A~~~~~~f~ViV~EsrP~~eG~-~~a-~~L~~~GI~vt~I~D---sav~~~m~~vd~VllGA 275 (406)
+.|++-|.+..+..+|....+ +.-+|++. .|.+.|. .+. +.|...|++++++.- .++...+..-+++|+-
T Consensus 99 ~~i~~ssGt~Ai~~al~~l~~--~Gd~Vi~~--~~~y~~~~~~~~~~l~~~G~~v~~v~~~d~~~le~ai~~~tklV~~- 173 (415)
T 2fq6_A 99 GCVLFPCGAAAVANSILAFIE--QGDHVLMT--NTAYEPSQDFCSKILSKLGVTTSWFDPLIGADIVKHLQPNTKIVFL- 173 (415)
T ss_dssp EEEEESSHHHHHHHHHHTTCC--TTCEEEEE--TTSCHHHHHHHHHTGGGGTCEEEEECTTCGGGGGGGCCTTEEEEEE-
T ss_pred eEEEeCCHHHHHHHHHHHHhC--CCCEEEEe--CCCchHHHHHHHHHHHHcCcEEEEECCCCHHHHHHhhccCCcEEEE-
Confidence 456654444444434443332 33466665 3666663 233 346678999999852 2222233222233322
Q ss_pred eeEeeCCCcccccchHHHHHHHhh--CCCceEE
Q 045642 276 HAVMANGGVIAPAGLHVLALAAKK--HDVPFVV 306 (406)
Q Consensus 276 dav~~nG~vvnk~GT~~lAl~Ak~--~~vPv~V 306 (406)
+.+..-.+.+.. -..++-+|++ ++++|+|
T Consensus 174 e~~~NptG~v~d--l~~I~~la~~~~~g~~liv 204 (415)
T 2fq6_A 174 ESPGSITMEVHD--VPAIVAAVRSVVPDAIIMI 204 (415)
T ss_dssp ESSCTTTCCCCC--HHHHHHHHHHHCTTCEEEE
T ss_pred ECCCCCCCEeec--HHHHHHHHHhhcCCCEEEE
Confidence 222211122222 2567888999 9999887
No 190
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=51.55 E-value=57 Score=26.84 Aligned_cols=93 Identities=14% Similarity=0.182 Sum_probs=52.0
Q ss_pred ccCcEEEeccChHHHHHHHHHHHHcCCceEEEEecCCCCcchHHHHHHHH-hCCCceEEEcch---H-HHHH-hhcCCEE
Q 045642 198 HQNEVILTLGHSKFVKEFLCAAKEKKRSFEVFIADGAPKFEGHILAKELD-KKGLKAIVITDS---A-VFAM-ISRVNMV 271 (406)
Q Consensus 198 ~~g~~ILT~g~S~tV~~~L~~A~~~~~~f~ViV~EsrP~~eG~~~a~~L~-~~GI~vt~I~Ds---a-v~~~-m~~vd~V 271 (406)
..++.|+.+|....=..+...+.+.| ++|++++..|.. ++.+. +.|+.+.. .|. . +... +.++|.|
T Consensus 17 ~~~~~v~IiG~G~iG~~la~~L~~~g--~~V~vid~~~~~-----~~~~~~~~g~~~~~-~d~~~~~~l~~~~~~~ad~V 88 (155)
T 2g1u_A 17 QKSKYIVIFGCGRLGSLIANLASSSG--HSVVVVDKNEYA-----FHRLNSEFSGFTVV-GDAAEFETLKECGMEKADMV 88 (155)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHTT--CEEEEEESCGGG-----GGGSCTTCCSEEEE-SCTTSHHHHHTTTGGGCSEE
T ss_pred cCCCcEEEECCCHHHHHHHHHHHhCC--CeEEEEECCHHH-----HHHHHhcCCCcEEE-ecCCCHHHHHHcCcccCCEE
Confidence 35678888998766666666666555 578888876643 22344 45665432 332 1 1111 4567777
Q ss_pred EEcceeEeeCCCcccccchHHHHHHHhh-CCCceEEe
Q 045642 272 IVGVHAVMANGGVIAPAGLHVLALAAKK-HDVPFVVV 307 (406)
Q Consensus 272 llGAdav~~nG~vvnk~GT~~lAl~Ak~-~~vPv~V~ 307 (406)
|+.... ..-...++.+++. ++...+++
T Consensus 89 i~~~~~---------~~~~~~~~~~~~~~~~~~~iv~ 116 (155)
T 2g1u_A 89 FAFTND---------DSTNFFISMNARYMFNVENVIA 116 (155)
T ss_dssp EECSSC---------HHHHHHHHHHHHHTSCCSEEEE
T ss_pred EEEeCC---------cHHHHHHHHHHHHHCCCCeEEE
Confidence 776532 1123455566776 66554443
No 191
>3kcq_A Phosphoribosylglycinamide formyltransferase; structural genomics, niaid, seattle structural center for infectious disease, ssgcid; 2.20A {Anaplasma phagocytophilum} SCOP: c.65.1.0
Probab=51.47 E-value=32 Score=31.13 Aligned_cols=70 Identities=13% Similarity=0.186 Sum_probs=42.1
Q ss_pred EEEeccChHHHHHHHHHHHHcC-CceEEEEec-CCCCcchHHHHHHHHhCCCceEEEc-----chHHHHHhh--cCCEEE
Q 045642 202 VILTLGHSKFVKEFLCAAKEKK-RSFEVFIAD-GAPKFEGHILAKELDKKGLKAIVIT-----DSAVFAMIS--RVNMVI 272 (406)
Q Consensus 202 ~ILT~g~S~tV~~~L~~A~~~~-~~f~ViV~E-srP~~eG~~~a~~L~~~GI~vt~I~-----Dsav~~~m~--~vd~Vl 272 (406)
.||.-|..+....+|.... .+ -..+|..+- .+|...|... ..+.|||+..+. |..+...++ ++|.++
T Consensus 12 ~vl~SG~gsnl~all~~~~-~~~~~~~I~~Vis~~~~a~~l~~---A~~~gIp~~~~~~~~~~~~~~~~~L~~~~~Dliv 87 (215)
T 3kcq_A 12 GVLISGRGSNLEALAKAFS-TEESSVVISCVISNNAEARGLLI---AQSYGIPTFVVKRKPLDIEHISTVLREHDVDLVC 87 (215)
T ss_dssp EEEESSCCHHHHHHHHHTC-CC-CSEEEEEEEESCTTCTHHHH---HHHTTCCEEECCBTTBCHHHHHHHHHHTTCSEEE
T ss_pred EEEEECCcHHHHHHHHHHH-cCCCCcEEEEEEeCCcchHHHHH---HHHcCCCEEEeCcccCChHHHHHHHHHhCCCEEE
Confidence 3666666666666666554 43 345655443 4777777543 346799999874 344555554 377777
Q ss_pred Ecc
Q 045642 273 VGV 275 (406)
Q Consensus 273 lGA 275 (406)
+.+
T Consensus 88 lag 90 (215)
T 3kcq_A 88 LAG 90 (215)
T ss_dssp ESS
T ss_pred EeC
Confidence 644
No 192
>3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A*
Probab=51.32 E-value=37 Score=32.45 Aligned_cols=23 Identities=17% Similarity=0.107 Sum_probs=17.3
Q ss_pred HHHHHHhhCCCceEEecCCcccc
Q 045642 292 VLALAAKKHDVPFVVVASTHELC 314 (406)
Q Consensus 292 ~lAl~Ak~~~vPv~V~aes~K~~ 314 (406)
...++|+..++|++.+...+-+.
T Consensus 131 ~~~~aA~~~giP~v~~~~~~~~~ 153 (415)
T 3rsc_A 131 AGQLLAARWRRPAVRLSAAFASN 153 (415)
T ss_dssp HHHHHHHHTTCCEEEEESSCCCC
T ss_pred HHHHHHHHhCCCEEEEEeccccc
Confidence 34677899999999988665443
No 193
>3ri6_A O-acetylhomoserine sulfhydrylase; PYR 5'-phosphate, gamma-elimination, direct sulfhydrylation, CY metabolism, protein thiocarboxylate, TR; 2.20A {Wolinella succinogenes}
Probab=50.98 E-value=1e+02 Score=30.24 Aligned_cols=98 Identities=15% Similarity=0.136 Sum_probs=53.8
Q ss_pred cEEEeccChHHHHHHHHHHHHcCCceEEEEecCCCCcchH-HHH-HHHHhCCCceEEEcch---HHHHHhhcCCEEEEcc
Q 045642 201 EVILTLGHSKFVKEFLCAAKEKKRSFEVFIADGAPKFEGH-ILA-KELDKKGLKAIVITDS---AVFAMISRVNMVIVGV 275 (406)
Q Consensus 201 ~~ILT~g~S~tV~~~L~~A~~~~~~f~ViV~EsrP~~eG~-~~a-~~L~~~GI~vt~I~Ds---av~~~m~~vd~VllGA 275 (406)
..|++-+.+..+...|....+ ..-+|++. .|.+.|. .+. ..+...|+.++.++-. ++...+..-+++|+ .
T Consensus 99 ~~v~~~sG~~Ai~~al~al~~--~Gd~Vi~~--~~~y~~~~~~~~~~~~~~G~~~~~v~~~d~~~l~~ai~~~t~~v~-~ 173 (430)
T 3ri6_A 99 GVLALGSGMAAISTAILTLAR--AGDSVVTT--DRLFGHTLSLFQKTLPSFGIEVRFVDVMDSLAVEHACDETTKLLF-L 173 (430)
T ss_dssp EEEEESCHHHHHHHHHHHHCC--TTCEEEEE--TTCCHHHHHHHHTHHHHTTCEEEEECTTCHHHHHHHCCTTEEEEE-E
T ss_pred cEEEECCHHHHHHHHHHHHhC--CCCEEEEc--CCCchhHHHHHHHHHHHcCCEEEEeCCCCHHHHHHhhCCCCeEEE-E
Confidence 355555555555555555542 33355554 4566663 333 3677889999998732 33344433234444 2
Q ss_pred eeEe-eCCCcccccchHHHHHHHhhCCCceEE
Q 045642 276 HAVM-ANGGVIAPAGLHVLALAAKKHDVPFVV 306 (406)
Q Consensus 276 dav~-~nG~vvnk~GT~~lAl~Ak~~~vPv~V 306 (406)
+... ..|.+. . --.++-+|+.++++++|
T Consensus 174 e~p~NptG~~~-d--l~~i~~la~~~g~~liv 202 (430)
T 3ri6_A 174 ETISNPQLQVA-D--LEALSKVVHAKGIPLVV 202 (430)
T ss_dssp ESSCTTTCCCC-C--HHHHHHHHHTTTCCEEE
T ss_pred ECCCCCCCeec-C--HHHHHHHHHHcCCEEEE
Confidence 2222 223332 2 23678889999999987
No 194
>2yv2_A Succinyl-COA synthetase alpha chain; COA-binding domain, ligase, structural genomics, NPPSFA; 2.20A {Aeropyrum pernix}
Probab=50.83 E-value=9.6 Score=36.17 Aligned_cols=105 Identities=13% Similarity=0.183 Sum_probs=66.0
Q ss_pred CcEEEeccChHHHHHHHHHHHHcCCceEEEEecCCCCcchHHHHHHHHhCCCceEEEcchHHHHHhhcCCEEEEcceeEe
Q 045642 200 NEVILTLGHSKFVKEFLCAAKEKKRSFEVFIADGAPKFEGHILAKELDKKGLKAIVITDSAVFAMISRVNMVIVGVHAVM 279 (406)
Q Consensus 200 g~~ILT~g~S~tV~~~L~~A~~~~~~f~ViV~EsrP~~eG~~~a~~L~~~GI~vt~I~Dsav~~~m~~vd~VllGAdav~ 279 (406)
-|+++.+-....+...+..|.+.|.+.-|++++.-|..+-..+.+...+.|+. ++-.+.++.+-+...+.-+....+.
T Consensus 72 ~DvaIi~vp~~~~~~~v~ea~~~Gi~~vVi~t~G~~~~~~~~l~~~A~~~gi~--viGPNc~Gii~~~~~~~~~~~~~~~ 149 (297)
T 2yv2_A 72 INTSIVFVPAPFAPDAVYEAVDAGIRLVVVITEGIPVHDTMRFVNYARQKGAT--IIGPNCPGAITPGQAKVGIMPGHIF 149 (297)
T ss_dssp CCEEEECCCGGGHHHHHHHHHHTTCSEEEECCCCCCHHHHHHHHHHHHHHTCE--EECSSSCEEEETTTEEEESCCGGGC
T ss_pred CCEEEEecCHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHcCCE--EEcCCCCeeEcccccceeecccCCC
Confidence 47777788888999999999988877556666665554445677777777763 5544444444343322222122222
Q ss_pred eCC--CcccccchHHHHHH--HhhCCCceEE
Q 045642 280 ANG--GVIAPAGLHVLALA--AKKHDVPFVV 306 (406)
Q Consensus 280 ~nG--~vvnk~GT~~lAl~--Ak~~~vPv~V 306 (406)
.-| +++++.|+...+++ +...++.|--
T Consensus 150 ~~G~va~vSqSG~l~~~~~~~~~~~g~G~s~ 180 (297)
T 2yv2_A 150 KEGGVAVVSRSGTLTYEISYMLTRQGIGQST 180 (297)
T ss_dssp CEEEEEEEESCHHHHHHHHHHHHHTTCCEEE
T ss_pred CCCCEEEEECCHHHHHHHHHHHHHcCCCeeE
Confidence 234 67889999987764 5557777643
No 195
>3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A*
Probab=50.73 E-value=42 Score=31.91 Aligned_cols=97 Identities=16% Similarity=0.172 Sum_probs=59.6
Q ss_pred CcEEEeccC---hH---HHHHHHHHHHHcCCceEEEEecCCCCcch----HHHHHHHHhCCCc---------eE---EEc
Q 045642 200 NEVILTLGH---SK---FVKEFLCAAKEKKRSFEVFIADGAPKFEG----HILAKELDKKGLK---------AI---VIT 257 (406)
Q Consensus 200 g~~ILT~g~---S~---tV~~~L~~A~~~~~~f~ViV~EsrP~~eG----~~~a~~L~~~GI~---------vt---~I~ 257 (406)
.-+|+..|+ .+ .+.+++....+++..++++++-..|...+ ..+.+...+.|++ +. .++
T Consensus 184 ~~~il~vGr~~~~Kg~~~li~a~~~l~~~~~~~~l~ivG~g~~~~~~~l~~~~~~~~~~~~l~~~v~~l~~vv~~~g~~~ 263 (413)
T 3oy2_A 184 DVLFLNMNRNTARKRLDIYVLAAARFISKYPDAKVRFLCNSHHESKFDLHSIALRELVASGVDNVFTHLNKIMINRTVLT 263 (413)
T ss_dssp SEEEECCSCSSGGGTHHHHHHHHHHHHHHCTTCCEEEEEECCTTCSCCHHHHHHHHHHHHTCSCHHHHHTTEEEECSCCC
T ss_pred ceEEEEcCCCchhcCcHHHHHHHHHHHHhCCCcEEEEEeCCcccchhhHHHHHHHHHHHcCcccccccccceeeccCcCC
Confidence 346777776 23 34444444444556677777755554433 3444445557776 22 345
Q ss_pred chHHHHHhhcCCEEEEcceeEeeCCCcccccchHHHHHHHhhCCCceEE
Q 045642 258 DSAVFAMISRVNMVIVGVHAVMANGGVIAPAGLHVLALAAKKHDVPFVV 306 (406)
Q Consensus 258 Dsav~~~m~~vd~VllGAdav~~nG~vvnk~GT~~lAl~Ak~~~vPv~V 306 (406)
+..+..++..+|.+++... .. |--...+=|-.+|+||++
T Consensus 264 ~~~~~~~~~~adv~v~pS~--~E--------~~~~~~lEAma~G~PvI~ 302 (413)
T 3oy2_A 264 DERVDMMYNACDVIVNCSS--GE--------GFGLCSAEGAVLGKPLII 302 (413)
T ss_dssp HHHHHHHHHHCSEEEECCS--CC--------SSCHHHHHHHTTTCCEEE
T ss_pred HHHHHHHHHhCCEEEeCCC--cC--------CCCcHHHHHHHcCCCEEE
Confidence 6689999999999998543 11 222345667789999997
No 196
>2oga_A Transaminase; PLP-dependent enzyme, desosamine, deoxysugars, antibiotics, hydrolase; HET: PGU; 2.05A {Streptomyces venezuelae} PDB: 2oge_A*
Probab=50.70 E-value=1.3e+02 Score=28.38 Aligned_cols=104 Identities=11% Similarity=0.053 Sum_probs=55.0
Q ss_pred HHHHHhcccCcEEEeccChHHHHHHHHHH-HHcCCceEEEEecCCCCcchHHHHHHHHhCCCceEEEcch---------H
Q 045642 191 EQAMELIHQNEVILTLGHSKFVKEFLCAA-KEKKRSFEVFIADGAPKFEGHILAKELDKKGLKAIVITDS---------A 260 (406)
Q Consensus 191 ~~a~~~I~~g~~ILT~g~S~tV~~~L~~A-~~~~~~f~ViV~EsrP~~eG~~~a~~L~~~GI~vt~I~Ds---------a 260 (406)
+..++++...+.|+|-+.+..+..++..+ .+.| -+|++.+ |.+.+ +...+...|+++..++-. .
T Consensus 70 ~~la~~~~~~~~v~~~~Gt~a~~~~l~~~~~~~g--d~vl~~~--~~~~~--~~~~~~~~g~~~~~~~~~~~~~~~d~~~ 143 (399)
T 2oga_A 70 AEFAAYCETDHAVGVNSGMDALQLALRGLGIGPG--DEVIVPS--HTYIA--SWLAVSATGATPVPVEPHEDHPTLDPLL 143 (399)
T ss_dssp HHHHHHTTSSEEEEESCHHHHHHHHHHHTTCCTT--CEEEEES--SSCTH--HHHHHHHTTCEEEEECBCSSSSSBCHHH
T ss_pred HHHHHHHCCCeEEEecCHHHHHHHHHHHhCCCCc--CEEEECC--CccHH--HHHHHHHCCCEEEEEecCCCCCCcCHHH
Confidence 33445565556777766666666666555 3223 3566654 55655 333455679988877521 2
Q ss_pred HHHHhhcCCEEEEcceeEeeCCCcccccchHHHHHHHhhCCCceEE
Q 045642 261 VFAMISRVNMVIVGVHAVMANGGVIAPAGLHVLALAAKKHDVPFVV 306 (406)
Q Consensus 261 v~~~m~~vd~VllGAdav~~nG~vvnk~GT~~lAl~Ak~~~vPv~V 306 (406)
+-..+..-.++|+- .. ..|.+.. --.++-+|+.+++++++
T Consensus 144 l~~~i~~~~~~v~~-~n--~tG~~~~---l~~i~~l~~~~~~~li~ 183 (399)
T 2oga_A 144 VEKAITPRTRALLP-VH--LYGHPAD---MDALRELADRHGLHIVE 183 (399)
T ss_dssp HHHHCCTTEEEECC-BC--GGGCCCC---HHHHHHHHHHHTCEECE
T ss_pred HHHhcCCCCeEEEE-eC--CcCCccC---HHHHHHHHHHcCCEEEE
Confidence 22223221233331 11 1222211 25677788889988776
No 197
>2rjn_A Response regulator receiver:metal-dependent phosphohydrolase, HD subdomain; structural genomics, oceanospirillum SP. MED92; 2.10A {Neptuniibacter caesariensis}
Probab=50.56 E-value=58 Score=26.00 Aligned_cols=79 Identities=20% Similarity=0.292 Sum_probs=46.5
Q ss_pred CceEEEEecCCCCcchHHHHHHHHhCCCceEEEcchHHH-HHhh--cCCEEEEcceeEeeCCCcccccchHHHHHHHhh-
Q 045642 224 RSFEVFIADGAPKFEGHILAKELDKKGLKAIVITDSAVF-AMIS--RVNMVIVGVHAVMANGGVIAPAGLHVLALAAKK- 299 (406)
Q Consensus 224 ~~f~ViV~EsrP~~eG~~~a~~L~~~GI~vt~I~Dsav~-~~m~--~vd~VllGAdav~~nG~vvnk~GT~~lAl~Ak~- 299 (406)
+..+|+|+|..|.. ...+...|...|+.|....+..-+ ..+. ..|.||+..+. . ..-|--.+..+.+.
T Consensus 6 ~~~~iLivdd~~~~-~~~l~~~L~~~g~~v~~~~~~~~a~~~l~~~~~dlvi~d~~l--~-----~~~g~~~~~~l~~~~ 77 (154)
T 2rjn_A 6 KNYTVMLVDDEQPI-LNSLKRLIKRLGCNIITFTSPLDALEALKGTSVQLVISDMRM--P-----EMGGEVFLEQVAKSY 77 (154)
T ss_dssp SCCEEEEECSCHHH-HHHHHHHHHTTTCEEEEESCHHHHHHHHTTSCCSEEEEESSC--S-----SSCHHHHHHHHHHHC
T ss_pred CCCeEEEEcCCHHH-HHHHHHHHHHcCCeEEEeCCHHHHHHHHhcCCCCEEEEecCC--C-----CCCHHHHHHHHHHhC
Confidence 45678888777542 235566777788888766654322 2222 36888876542 2 22344444444333
Q ss_pred CCCceEEecCC
Q 045642 300 HDVPFVVVAST 310 (406)
Q Consensus 300 ~~vPv~V~aes 310 (406)
..+|+++++..
T Consensus 78 ~~~~ii~ls~~ 88 (154)
T 2rjn_A 78 PDIERVVISGY 88 (154)
T ss_dssp TTSEEEEEECG
T ss_pred CCCcEEEEecC
Confidence 47999998764
No 198
>1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A*
Probab=50.19 E-value=36 Score=31.24 Aligned_cols=92 Identities=15% Similarity=0.146 Sum_probs=49.9
Q ss_pred cEEEeccChHHHHHHHHHHHHcCCceEEEEecCCCCcchHHHHHHHHhCCCceEEEcc-hHHHHHhh--cCCEEEEccee
Q 045642 201 EVILTLGHSKFVKEFLCAAKEKKRSFEVFIADGAPKFEGHILAKELDKKGLKAIVITD-SAVFAMIS--RVNMVIVGVHA 277 (406)
Q Consensus 201 ~~ILT~g~S~tV~~~L~~A~~~~~~f~ViV~EsrP~~eG~~~a~~L~~~GI~vt~I~D-sav~~~m~--~vd~VllGAda 277 (406)
.+||+.|.++.+=..|.... ..+..+|+++..++.. + +.| ..+..++. ++|.||--|-.
T Consensus 4 ~~ilVtGatG~iG~~l~~~L-~~~g~~v~~~~r~~~~--------------D---~~d~~~~~~~~~~~~~d~vih~a~~ 65 (321)
T 1e6u_A 4 QRVFIAGHRGMVGSAIRRQL-EQRGDVELVLRTRDEL--------------N---LLDSRAVHDFFASERIDQVYLAAAK 65 (321)
T ss_dssp EEEEEETTTSHHHHHHHHHH-TTCTTEEEECCCTTTC--------------C---TTCHHHHHHHHHHHCCSEEEECCCC
T ss_pred CEEEEECCCcHHHHHHHHHH-HhCCCeEEEEecCccC--------------C---ccCHHHHHHHHHhcCCCEEEEcCee
Confidence 45777777666655554444 2233556665443210 0 112 23445555 67777665422
Q ss_pred Eee------CC---CcccccchHHHHHHHhhCCCceEEecCC
Q 045642 278 VMA------NG---GVIAPAGLHVLALAAKKHDVPFVVVAST 310 (406)
Q Consensus 278 v~~------nG---~vvnk~GT~~lAl~Ak~~~vPv~V~aes 310 (406)
.-. +- --+|-.||..++-+|+..+++-+|...+
T Consensus 66 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS 107 (321)
T 1e6u_A 66 VGGIVANNTYPADFIYQNMMIESNIIHAAHQNDVNKLLFLGS 107 (321)
T ss_dssp CCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred cCCcchhhhCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEcc
Confidence 100 00 0135679999999999999866665554
No 199
>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2
Probab=50.15 E-value=43 Score=30.97 Aligned_cols=105 Identities=14% Similarity=0.120 Sum_probs=59.0
Q ss_pred EEEeccChHHHHHHHHHHHHcCCceEEEEecCCCCcchHHHHHHHHhCC-CceEEEcc----hHHHHHhhc--CCEEEEc
Q 045642 202 VILTLGHSKFVKEFLCAAKEKKRSFEVFIADGAPKFEGHILAKELDKKG-LKAIVITD----SAVFAMISR--VNMVIVG 274 (406)
Q Consensus 202 ~ILT~g~S~tV~~~L~~A~~~~~~f~ViV~EsrP~~eG~~~a~~L~~~G-I~vt~I~D----sav~~~m~~--vd~VllG 274 (406)
+||+.|.++.+=..|.....+ +..+|+++.-.........+..|...+ +.+. ..| .++..++.. +|.||--
T Consensus 3 ~vlVTGatG~iG~~l~~~L~~-~g~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~-~~Dl~d~~~~~~~~~~~~~d~vih~ 80 (347)
T 1orr_A 3 KLLITGGCGFLGSNLASFALS-QGIDLIVFDNLSRKGATDNLHWLSSLGNFEFV-HGDIRNKNDVTRLITKYMPDSCFHL 80 (347)
T ss_dssp EEEEETTTSHHHHHHHHHHHH-TTCEEEEEECCCSTTHHHHHHHHHTTCCCEEE-ECCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred EEEEeCCCchhHHHHHHHHHh-CCCEEEEEeCCCccCchhhhhhhccCCceEEE-EcCCCCHHHHHHHHhccCCCEEEEC
Confidence 578888877776655443322 346788876432222223345565544 4332 233 345566776 8887765
Q ss_pred ceeEeeC-----C---CcccccchHHHHHHHhhCCCc--eEEec
Q 045642 275 VHAVMAN-----G---GVIAPAGLHVLALAAKKHDVP--FVVVA 308 (406)
Q Consensus 275 Adav~~n-----G---~vvnk~GT~~lAl~Ak~~~vP--v~V~a 308 (406)
|-....+ - --+|-.||..++-+|+.++++ |+.++
T Consensus 81 A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~~~~iv~~S 124 (347)
T 1orr_A 81 AGQVAMTTSIDNPCMDFEINVGGTLNLLEAVRQYNSNCNIIYSS 124 (347)
T ss_dssp CCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEE
T ss_pred CcccChhhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCceEEEec
Confidence 5321100 0 013667999999999998875 44443
No 200
>1tq8_A Hypothetical protein RV1636; MTCY01B2.28, structural target, NYSGXRC, PSI, protein structure initiative; 2.40A {Mycobacterium tuberculosis} SCOP: c.26.2.4
Probab=49.94 E-value=1.1e+02 Score=25.28 Aligned_cols=62 Identities=15% Similarity=0.236 Sum_probs=36.4
Q ss_pred HHHHHhCCCc-eEEE--cchHHHHHh-----hcCCEEEEcceeEeeCCCccc-ccchHHHHHHHhhCCCceEEec
Q 045642 243 AKELDKKGLK-AIVI--TDSAVFAMI-----SRVNMVIVGVHAVMANGGVIA-PAGLHVLALAAKKHDVPFVVVA 308 (406)
Q Consensus 243 a~~L~~~GI~-vt~I--~Dsav~~~m-----~~vd~VllGAdav~~nG~vvn-k~GT~~lAl~Ak~~~vPv~V~a 308 (406)
.+.+...|++ +... .....-.++ .++|.|++|++. .|++-. -.|+..--+ .++..+||+|+-
T Consensus 87 ~~~~~~~gv~~v~~~v~~G~~~~~I~~~a~~~~~DLIV~G~~g---~~~~~~~~lGSva~~v-l~~a~~PVlvV~ 157 (163)
T 1tq8_A 87 KERAHNAGAKNVEERPIVGAPVDALVNLADEEKADLLVVGNVG---LSTIAGRLLGSVPANV-SRRAKVDVLIVH 157 (163)
T ss_dssp HHHHHTTTCCEEEEEEECSSHHHHHHHHHHHTTCSEEEEECCC---CCSHHHHHTBBHHHHH-HHHTTCEEEEEC
T ss_pred HHHHHHcCCCeEEEEEecCCHHHHHHHHHHhcCCCEEEECCCC---CCcccceeeccHHHHH-HHhCCCCEEEEe
Confidence 3455567888 6533 222222332 369999999975 233322 356655444 445679999974
No 201
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=49.92 E-value=37 Score=28.65 Aligned_cols=104 Identities=17% Similarity=0.109 Sum_probs=58.6
Q ss_pred cEEEeccChHHHHHHHHH-HHHcCCceEEEEecCCCCcchHHHHHHHHhCCCceEEE--cc-hHHHHHhhcCCEEEEcce
Q 045642 201 EVILTLGHSKFVKEFLCA-AKEKKRSFEVFIADGAPKFEGHILAKELDKKGLKAIVI--TD-SAVFAMISRVNMVIVGVH 276 (406)
Q Consensus 201 ~~ILT~g~S~tV~~~L~~-A~~~~~~f~ViV~EsrP~~eG~~~a~~L~~~GI~vt~I--~D-sav~~~m~~vd~VllGAd 276 (406)
.+||..|.++.+=..|.. +.++| .+|+++.-.|... ..+...++.+... .| ..+..+++.+|.||--|-
T Consensus 4 ~~ilVtGatG~iG~~l~~~l~~~g--~~V~~~~r~~~~~-----~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a~ 76 (206)
T 1hdo_A 4 KKIAIFGATGQTGLTTLAQAVQAG--YEVTVLVRDSSRL-----PSEGPRPAHVVVGDVLQAADVDKTVAGQDAVIVLLG 76 (206)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTT--CEEEEEESCGGGS-----CSSSCCCSEEEESCTTSHHHHHHHHTTCSEEEECCC
T ss_pred CEEEEEcCCcHHHHHHHHHHHHCC--CeEEEEEeChhhc-----ccccCCceEEEEecCCCHHHHHHHHcCCCEEEECcc
Confidence 578888887777665544 44344 6777776544211 0011223332221 22 355667788887776542
Q ss_pred eEee-CCCcccccchHHHHHHHhhCCCceEEecCCc
Q 045642 277 AVMA-NGGVIAPAGLHVLALAAKKHDVPFVVVASTH 311 (406)
Q Consensus 277 av~~-nG~vvnk~GT~~lAl~Ak~~~vPv~V~aes~ 311 (406)
.... +-.-+|-.|+..+.-+|+..+++-+|...+.
T Consensus 77 ~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~v~~Ss~ 112 (206)
T 1hdo_A 77 TRNDLSPTTVMSEGARNIVAAMKAHGVDKVVACTSA 112 (206)
T ss_dssp CTTCCSCCCHHHHHHHHHHHHHHHHTCCEEEEECCG
T ss_pred CCCCCCccchHHHHHHHHHHHHHHhCCCeEEEEeee
Confidence 2110 1112456789999989998888766665554
No 202
>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G
Probab=49.82 E-value=65 Score=28.22 Aligned_cols=109 Identities=17% Similarity=0.222 Sum_probs=59.4
Q ss_pred CcEEEeccChHHHHHHHHHHHHcCCceEEEEecCCCCcchHHHHHHHHhCCCceEEE-cc----hHHHHHhh-------c
Q 045642 200 NEVILTLGHSKFVKEFLCAAKEKKRSFEVFIADGAPKFEGHILAKELDKKGLKAIVI-TD----SAVFAMIS-------R 267 (406)
Q Consensus 200 g~~ILT~g~S~tV~~~L~~A~~~~~~f~ViV~EsrP~~eG~~~a~~L~~~GI~vt~I-~D----sav~~~m~-------~ 267 (406)
|.+||..|.|+.+=..+.....+ +..+|+++-.|.......++++|.+.|-++.++ .| ..+..++. +
T Consensus 1 ~k~vlVTGasggiG~~la~~l~~-~G~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ 79 (244)
T 1edo_A 1 SPVVVVTGASRGIGKAIALSLGK-AGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAWGT 79 (244)
T ss_dssp CCEEEETTCSSHHHHHHHHHHHH-TTCEEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHHSSC
T ss_pred CCEEEEeCCCchHHHHHHHHHHH-CCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEeCCCCCHHHHHHHHHHHHHHcCC
Confidence 35678888877766655444321 346777765554333445666776666555544 33 23444444 5
Q ss_pred CCEEEEcceeEeeCCC-------------cccccchHHHHHHHhhC----CCceEEecCC
Q 045642 268 VNMVIVGVHAVMANGG-------------VIAPAGLHVLALAAKKH----DVPFVVVAST 310 (406)
Q Consensus 268 vd~VllGAdav~~nG~-------------vvnk~GT~~lAl~Ak~~----~vPv~V~aes 310 (406)
+|.||--|- +...+. -+|-.|+..++.++..+ +.+-+|...+
T Consensus 80 id~li~~Ag-~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS 138 (244)
T 1edo_A 80 IDVVVNNAG-ITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIAS 138 (244)
T ss_dssp CSEEEECCC-CCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECC
T ss_pred CCEEEECCC-CCCCcCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCEEEEECC
Confidence 787776552 222221 13566777777665442 4444444433
No 203
>3ip3_A Oxidoreductase, putative; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.14A {Thermotoga maritima}
Probab=49.73 E-value=35 Score=32.27 Aligned_cols=53 Identities=13% Similarity=0.201 Sum_probs=35.0
Q ss_pred CCceEEE-EecCCCCcchHHHHHHHHhCCCceEEEcchHHHHHhhcCCEEEEcc
Q 045642 223 KRSFEVF-IADGAPKFEGHILAKELDKKGLKAIVITDSAVFAMISRVNMVIVGV 275 (406)
Q Consensus 223 ~~~f~Vi-V~EsrP~~eG~~~a~~L~~~GI~vt~I~Dsav~~~m~~vd~VllGA 275 (406)
...++|. |++..|......+++.+.+.|+.+....|-.-..--+++|.|++..
T Consensus 22 ~~~~~lvav~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~vD~V~I~t 75 (337)
T 3ip3_A 22 DEECSITGIAPGVPEEDLSKLEKAISEMNIKPKKYNNWWEMLEKEKPDILVINT 75 (337)
T ss_dssp CTTEEEEEEECSSTTCCCHHHHHHHHTTTCCCEECSSHHHHHHHHCCSEEEECS
T ss_pred CCCcEEEEEecCCchhhHHHHHHHHHHcCCCCcccCCHHHHhcCCCCCEEEEeC
Confidence 3456765 6776664455566777777898777776644433345799999864
No 204
>1v2d_A Glutamine aminotransferase; PLP, riken structural genomics/proteomics initi RSGI, structural genomics; HET: PLP; 1.90A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1v2e_A* 1v2f_A*
Probab=49.72 E-value=1.5e+02 Score=27.62 Aligned_cols=93 Identities=22% Similarity=0.308 Sum_probs=52.2
Q ss_pred CcEEEeccChHHHHHHHHHHHHcCCceEEEEecCCCCcchHHHHHHHHhCCCceEEEcch--------HHHHHhh----c
Q 045642 200 NEVILTLGHSKFVKEFLCAAKEKKRSFEVFIADGAPKFEGHILAKELDKKGLKAIVITDS--------AVFAMIS----R 267 (406)
Q Consensus 200 g~~ILT~g~S~tV~~~L~~A~~~~~~f~ViV~EsrP~~eG~~~a~~L~~~GI~vt~I~Ds--------av~~~m~----~ 267 (406)
..+++|.|.+..+..++..+.+.| -+|++.+ |.+.|.. ..+...|+++..++-. -+..+-+ +
T Consensus 79 ~~v~~~~g~~~a~~~~~~~~~~~g--d~Vl~~~--~~~~~~~--~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~l~~~ 152 (381)
T 1v2d_A 79 ESVVVTSGATEALYVLLQSLVGPG--DEVVVLE--PFFDVYL--PDAFLAGAKARLVRLDLTPEGFRLDLSALEKALTPR 152 (381)
T ss_dssp GGEEEESSHHHHHHHHHHHHCCTT--CEEEEEE--SCCTTHH--HHHHHTTCEEEEEECEEETTEEECCHHHHHTTCCTT
T ss_pred hhEEEcCChHHHHHHHHHHhCCCC--CEEEEcC--CCchhHH--HHHHHcCCEEEEEeCCCCCccCCcCHHHHHHhcCcC
Confidence 457888887777777777765333 3566553 4555533 2345678887776522 1222222 2
Q ss_pred CCEEEEcceeEeeCCCcccccch-------HHHHHHHhhCCCceEE
Q 045642 268 VNMVIVGVHAVMANGGVIAPAGL-------HVLALAAKKHDVPFVV 306 (406)
Q Consensus 268 vd~VllGAdav~~nG~vvnk~GT-------~~lAl~Ak~~~vPv~V 306 (406)
...|++. ..-|..|+ ..++-+|+.+++++++
T Consensus 153 ~~~v~~~--------~~~nptG~~~~~~~l~~i~~~~~~~~~~li~ 190 (381)
T 1v2d_A 153 TRALLLN--------TPMNPTGLVFGERELEAIARLARAHDLFLIS 190 (381)
T ss_dssp EEEEEEE--------SSCTTTCCCCCHHHHHHHHHHHHHTTCEEEE
T ss_pred CEEEEEC--------CCCCCCCCccCHHHHHHHHHHHHHcCCEEEE
Confidence 2223321 22344444 4566788899998886
No 205
>2z9v_A Aspartate aminotransferase; pyridoxamine, pyruvate; HET: PXM; 1.70A {Mesorhizobium loti} PDB: 2z9u_A* 2z9w_A* 2z9x_A*
Probab=49.62 E-value=1.2e+02 Score=28.36 Aligned_cols=99 Identities=16% Similarity=0.130 Sum_probs=57.4
Q ss_pred CcEEEeccChHHHHHHHHHHHHcCCceEEEEecCCCCcchHHHHHHHHhCCCceEEEc-------c-hHHHHHh---hcC
Q 045642 200 NEVILTLGHSKFVKEFLCAAKEKKRSFEVFIADGAPKFEGHILAKELDKKGLKAIVIT-------D-SAVFAMI---SRV 268 (406)
Q Consensus 200 g~~ILT~g~S~tV~~~L~~A~~~~~~f~ViV~EsrP~~eG~~~a~~L~~~GI~vt~I~-------D-sav~~~m---~~v 268 (406)
..+++|.|.+..+..++..+.+.| -+|++.+ |.+.|......+...|+++..++ | ..+-..+ ++.
T Consensus 60 ~~v~~t~g~t~a~~~~~~~~~~~g--d~Vl~~~--~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~~~ 135 (392)
T 2z9v_A 60 KPVILHGEPVLGLEAAAASLISPD--DVVLNLA--SGVYGKGFGYWAKRYSPHLLEIEVPYNEAIDPQAVADMLKAHPEI 135 (392)
T ss_dssp CCEEESSCTHHHHHHHHHHHCCTT--CCEEEEE--SSHHHHHHHHHHHHHCSCEEEEECCTTSCCCHHHHHHHHHHCTTC
T ss_pred CEEEEeCCchHHHHHHHHHhcCCC--CEEEEec--CCcccHHHHHHHHHcCCceEEeeCCCCCCCCHHHHHHHHhcCCCC
Confidence 467888888877777777664333 3466653 44444333444455788887774 2 2334444 244
Q ss_pred CEEEEcceeEeeCCCcccccchHHHHHHHhhCCCceEE
Q 045642 269 NMVIVGVHAVMANGGVIAPAGLHVLALAAKKHDVPFVV 306 (406)
Q Consensus 269 d~VllGAdav~~nG~vvnk~GT~~lAl~Ak~~~vPv~V 306 (406)
..|++ ...-...|.+.. --.++-+|+++++++++
T Consensus 136 ~~v~~-~~~~nptG~~~~---l~~i~~l~~~~~~~li~ 169 (392)
T 2z9v_A 136 TVVSV-CHHDTPSGTINP---IDAIGALVSAHGAYLIV 169 (392)
T ss_dssp CEEEE-ESEEGGGTEECC---HHHHHHHHHHTTCEEEE
T ss_pred cEEEE-eccCCCCceecc---HHHHHHHHHHcCCeEEE
Confidence 44444 333233344443 34677889999998776
No 206
>3cis_A Uncharacterized protein; alpha/beta hydrolase, ATP, universal stress protein, unknown function; HET: ATP; 2.90A {Mycobacterium tuberculosis} PDB: 2jax_A*
Probab=49.61 E-value=1.5e+02 Score=26.94 Aligned_cols=59 Identities=12% Similarity=0.126 Sum_probs=37.3
Q ss_pred CCceEEEcc-----hHHHHHhhcCCEEEEcceeEeeCCCccc-ccchHHHHHHHhhCCCceEEecCCcc
Q 045642 250 GLKAIVITD-----SAVFAMISRVNMVIVGVHAVMANGGVIA-PAGLHVLALAAKKHDVPFVVVASTHE 312 (406)
Q Consensus 250 GI~vt~I~D-----sav~~~m~~vd~VllGAdav~~nG~vvn-k~GT~~lAl~Ak~~~vPv~V~aes~K 312 (406)
|++++...- ..+..+..++|.||+|++. .|++-. -.|+..-. +.++..+||+|+-+.++
T Consensus 100 ~~~~~~~~~~g~~~~~I~~~a~~~DliV~G~~g---~~~~~~~~~Gs~~~~-vl~~~~~PVlvv~~~~~ 164 (309)
T 3cis_A 100 PPTVHSEIVPAAAVPTLVDMSKDAVLMVVGCLG---SGRWPGRLLGSVSSG-LLRHAHCPVVIIHDEDS 164 (309)
T ss_dssp CSCEEEEEESSCHHHHHHHHGGGEEEEEEESSC---TTCCTTCCSCHHHHH-HHHHCSSCEEEECTTCC
T ss_pred CceEEEEEecCCHHHHHHHHhcCCCEEEECCCC---CccccccccCcHHHH-HHHhCCCCEEEEcCCcc
Confidence 888765321 2333344689999999975 233332 35765544 45566999999976654
No 207
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=49.61 E-value=70 Score=25.07 Aligned_cols=89 Identities=16% Similarity=0.062 Sum_probs=47.8
Q ss_pred cEEEeccChHHHHHHHHHHHHcCCceEEEEecCCCCcchHHHHHHHHh-CCCceEEEc--chHH-H-HHhhcCCEEEEcc
Q 045642 201 EVILTLGHSKFVKEFLCAAKEKKRSFEVFIADGAPKFEGHILAKELDK-KGLKAIVIT--DSAV-F-AMISRVNMVIVGV 275 (406)
Q Consensus 201 ~~ILT~g~S~tV~~~L~~A~~~~~~f~ViV~EsrP~~eG~~~a~~L~~-~GI~vt~I~--Dsav-~-~~m~~vd~VllGA 275 (406)
..|+.+|....=..+.....+.| .+|++++..|. .++.+.+ .|+.+.... |... . ..+.++|.|++.+
T Consensus 5 m~i~IiG~G~iG~~~a~~L~~~g--~~v~~~d~~~~-----~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~d~vi~~~ 77 (140)
T 1lss_A 5 MYIIIAGIGRVGYTLAKSLSEKG--HDIVLIDIDKD-----ICKKASAEIDALVINGDCTKIKTLEDAGIEDADMYIAVT 77 (140)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT--CEEEEEESCHH-----HHHHHHHHCSSEEEESCTTSHHHHHHTTTTTCSEEEECC
T ss_pred CEEEEECCCHHHHHHHHHHHhCC--CeEEEEECCHH-----HHHHHHHhcCcEEEEcCCCCHHHHHHcCcccCCEEEEee
Confidence 46777788665555555555444 57777776542 2344443 476543221 2111 1 1156788888875
Q ss_pred eeEeeCCCcccccchHHHHHHHhhCCCceE
Q 045642 276 HAVMANGGVIAPAGLHVLALAAKKHDVPFV 305 (406)
Q Consensus 276 dav~~nG~vvnk~GT~~lAl~Ak~~~vPv~ 305 (406)
..- -. ...++.+|+.++.+-+
T Consensus 78 ~~~-----~~----~~~~~~~~~~~~~~~i 98 (140)
T 1lss_A 78 GKE-----EV----NLMSSLLAKSYGINKT 98 (140)
T ss_dssp SCH-----HH----HHHHHHHHHHTTCCCE
T ss_pred CCc-----hH----HHHHHHHHHHcCCCEE
Confidence 321 11 1345667887775533
No 208
>2nu8_A Succinyl-COA ligase [ADP-forming] subunit alpha; citric acid cycle, heterotetramer, ligase, ATP-grAsp fold, R fold; HET: COA; 2.15A {Escherichia coli} SCOP: c.2.1.8 c.23.4.1 PDB: 2nu9_A* 2nu7_A* 2nua_A* 2nu6_A* 2scu_A* 1jll_A* 1scu_A* 1jkj_A* 1cqj_A* 1cqi_A*
Probab=49.56 E-value=9.9 Score=35.87 Aligned_cols=105 Identities=12% Similarity=0.176 Sum_probs=65.0
Q ss_pred cCcEEEeccChHHHHHHHHHHHHcCCceEEEEecCCCCcchHHHHHHHHhCCCceEEEcchHHHHHhhcCCEEEEcceeE
Q 045642 199 QNEVILTLGHSKFVKEFLCAAKEKKRSFEVFIADGAPKFEGHILAKELDKKGLKAIVITDSAVFAMISRVNMVIVGVHAV 278 (406)
Q Consensus 199 ~g~~ILT~g~S~tV~~~L~~A~~~~~~f~ViV~EsrP~~eG~~~a~~L~~~GI~vt~I~Dsav~~~m~~vd~VllGAdav 278 (406)
+-|.++.+-....+...+..|.+.|.+.-|++++.-|..+-..+.+...+.|+. ++-.+.++.+-+..-+.-.-+..+
T Consensus 64 ~~D~viI~tP~~~~~~~~~ea~~~Gi~~iVi~t~G~~~~~~~~l~~~A~~~gv~--liGPNc~Gi~~p~~~~~~~~~~~~ 141 (288)
T 2nu8_A 64 GATASVIYVPAPFCKDSILEAIDAGIKLIITITEGIPTLDMLTVKVKLDEAGVR--MIGPNTPGVITPGECKIGIQPGHI 141 (288)
T ss_dssp CCCEEEECCCGGGHHHHHHHHHHTTCSEEEECCCCCCHHHHHHHHHHHHHHTCE--EECSSCCEEEETTTEEEESSCTTS
T ss_pred CCCEEEEecCHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHcCCE--EEecCCcceecCCcceeEecccCC
Confidence 347788788888999999999988877666667766655556777777777874 343334333333321111111112
Q ss_pred eeCC--CcccccchHHHHHH--HhhCCCceE
Q 045642 279 MANG--GVIAPAGLHVLALA--AKKHDVPFV 305 (406)
Q Consensus 279 ~~nG--~vvnk~GT~~lAl~--Ak~~~vPv~ 305 (406)
..-| +++++.||...+++ +...++.|-
T Consensus 142 ~~~G~i~~vsqSG~l~~~~~~~~~~~g~G~s 172 (288)
T 2nu8_A 142 HKPGKVGIVSRSGTLTYEAVKQTTDYGFGQS 172 (288)
T ss_dssp CCEEEEEEEESCHHHHHHHHHHHHHTTCCEE
T ss_pred CCCCCEEEEECcHHHHHHHHHHHHhcCCCEE
Confidence 2233 57788999766654 566777765
No 209
>3oks_A 4-aminobutyrate transaminase; ssgcid, transferase, seattle structural genomics center for infectious disease; HET: LLP; 1.80A {Mycobacterium smegmatis} PDB: 3r4t_A* 3q8n_A
Probab=49.46 E-value=1.1e+02 Score=29.82 Aligned_cols=116 Identities=25% Similarity=0.281 Sum_probs=64.4
Q ss_pred HHHHHHHHhcc---cCcEEEeccChHHHHHHHHHHHH-cCCceEEEEecCCCCcchH-HHHHHHHhC------C-----C
Q 045642 188 GIAEQAMELIH---QNEVILTLGHSKFVKEFLCAAKE-KKRSFEVFIADGAPKFEGH-ILAKELDKK------G-----L 251 (406)
Q Consensus 188 ~I~~~a~~~I~---~g~~ILT~g~S~tV~~~L~~A~~-~~~~f~ViV~EsrP~~eG~-~~a~~L~~~------G-----I 251 (406)
.+++..+++.. ...+++|.|.|..++..|+.|.. .|+ -+|++. .|.+.|. ..+..+... + -
T Consensus 108 ~la~~l~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~g~-~~ii~~--~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~ 184 (451)
T 3oks_A 108 AVCEQLNRLTPVRGDKRSALFNSGSEAVENAVKIARSHTHK-PAVVAF--DHAYHGRTNLTMALTAKVMPYKDGFGPFAP 184 (451)
T ss_dssp HHHHHHHHHSSCCSSEEEEEESSHHHHHHHHHHHHHHHHCC-CEEEEE--TTCCCCSSHHHHHHCCCCTTTTTTCCSCCS
T ss_pred HHHHHHHHhCCcCCCCEEEEeCcHHHHHHHHHHHHHHhcCC-CeEEEE--cCCcCCccHHHHHhcCCCcccccCCCCCCC
Confidence 44444444443 23578888999999999988764 343 345554 3455554 223333211 1 1
Q ss_pred ceEEEcch------------------HHHH---Hhh----cCCEEEEcceeEeeCCCcccccc--hHHHHHHHhhCCCce
Q 045642 252 KAIVITDS------------------AVFA---MIS----RVNMVIVGVHAVMANGGVIAPAG--LHVLALAAKKHDVPF 304 (406)
Q Consensus 252 ~vt~I~Ds------------------av~~---~m~----~vd~VllGAdav~~nG~vvnk~G--T~~lAl~Ak~~~vPv 304 (406)
.+..++-. .+.. .+. .-+..++=.+-+..+||++..-- -..++-+|++|++.+
T Consensus 185 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~~~~~~~~~aavi~ep~~~~gG~~~~~~~~l~~l~~l~~~~g~~l 264 (451)
T 3oks_A 185 EIYRAPLSYPFRDAEFGKELATDGELAAKRAITVIDKQIGADNLAAVVIEPIQGEGGFIVPADGFLPTLLDWCRKNDVVF 264 (451)
T ss_dssp SEEEECCCCHHHHGGGCTTTTTCHHHHHHHHHHHHHHHTCGGGEEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHTTCEE
T ss_pred CcEEeCCCccccccccccccchhhHHHHHHHHHHHHhhcCCCCEEEEEEcCCcCCCCccCCCHHHHHHHHHHHHHcCCEE
Confidence 34444321 1211 121 12344444566888888876443 345667899999988
Q ss_pred EE
Q 045642 305 VV 306 (406)
Q Consensus 305 ~V 306 (406)
++
T Consensus 265 I~ 266 (451)
T 3oks_A 265 IA 266 (451)
T ss_dssp EE
T ss_pred EE
Confidence 85
No 210
>2o8r_A Polyphosphate kinase; structural genomics, protein structure initiative, PSI, nysgrc, NEW YORK structural genomics research consortium; HET: MSE; 2.70A {Porphyromonas gingivalis} SCOP: a.7.15.1 d.322.1.2 d.136.1.4 d.136.1.4
Probab=49.43 E-value=28 Score=37.25 Aligned_cols=50 Identities=18% Similarity=0.218 Sum_probs=34.9
Q ss_pred cChHHHHHHHHHHHHcCCceEEEEecCCCCcc--hHHHHHHHHhCCCceEEE
Q 045642 207 GHSKFVKEFLCAAKEKKRSFEVFIADGAPKFE--GHILAKELDKKGLKAIVI 256 (406)
Q Consensus 207 g~S~tV~~~L~~A~~~~~~f~ViV~EsrP~~e--G~~~a~~L~~~GI~vt~I 256 (406)
+..+-+...|..|+++|++.+|+|=-.....+ ....++.|.++|+.|.+-
T Consensus 381 ~~ds~Iv~ALi~AA~rGv~V~vLvel~arfdee~ni~wa~~Le~aGv~Vv~g 432 (705)
T 2o8r_A 381 AENSSIISALEAAAQSGKKVSVFVELKARFDEENNLRLSERMRRSGIRIVYS 432 (705)
T ss_dssp CSCCHHHHHHHHHHHTTCEEEEEECCCSCC----CHHHHHHHHHHTCEEEEC
T ss_pred cCCHHHHHHHHHHHHCCCEEEEEEeCCCCcchhhhHHHHHHHHHCCCEEEEc
Confidence 43456777777777788888887753333333 468899999999998774
No 211
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=49.18 E-value=43 Score=28.69 Aligned_cols=99 Identities=15% Similarity=0.079 Sum_probs=57.4
Q ss_pred EEEeccChHHHHHHHHH-HHHcCCceEEEEecCCCCcchHHHHHHHHhCCCceEEE--cchHHHHHhhcCCEEEEcceeE
Q 045642 202 VILTLGHSKFVKEFLCA-AKEKKRSFEVFIADGAPKFEGHILAKELDKKGLKAIVI--TDSAVFAMISRVNMVIVGVHAV 278 (406)
Q Consensus 202 ~ILT~g~S~tV~~~L~~-A~~~~~~f~ViV~EsrP~~eG~~~a~~L~~~GI~vt~I--~Dsav~~~m~~vd~VllGAdav 278 (406)
.||..|.++.+=..|.. +.++| ++|+++.-+|.. +..|. .++.+... .|... ..+..+|.||--|-.
T Consensus 2 kvlVtGatG~iG~~l~~~L~~~g--~~V~~~~R~~~~-----~~~~~-~~~~~~~~D~~d~~~-~~~~~~d~vi~~ag~- 71 (221)
T 3ew7_A 2 KIGIIGATGRAGSRILEEAKNRG--HEVTAIVRNAGK-----ITQTH-KDINILQKDIFDLTL-SDLSDQNVVVDAYGI- 71 (221)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTT--CEEEEEESCSHH-----HHHHC-SSSEEEECCGGGCCH-HHHTTCSEEEECCCS-
T ss_pred eEEEEcCCchhHHHHHHHHHhCC--CEEEEEEcCchh-----hhhcc-CCCeEEeccccChhh-hhhcCCCEEEECCcC-
Confidence 47777877666555544 33344 678877655421 22232 45544332 23222 567788888875533
Q ss_pred eeCCCcccccchHHHHHHHhhCCCceEEecCC
Q 045642 279 MANGGVIAPAGLHVLALAAKKHDVPFVVVAST 310 (406)
Q Consensus 279 ~~nG~vvnk~GT~~lAl~Ak~~~vPv~V~aes 310 (406)
.....-+|-.|+..+.-+|+..+++-+|...+
T Consensus 72 ~~~~~~~~~~~~~~l~~a~~~~~~~~~v~~SS 103 (221)
T 3ew7_A 72 SPDEAEKHVTSLDHLISVLNGTVSPRLLVVGG 103 (221)
T ss_dssp STTTTTSHHHHHHHHHHHHCSCCSSEEEEECC
T ss_pred CccccchHHHHHHHHHHHHHhcCCceEEEEec
Confidence 12223446788999999999986655554433
No 212
>1v4v_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, two domains, homodimer, riken structural genomics/proteomics initiative, RSGI; HET: MSE; 1.80A {Thermus thermophilus} SCOP: c.87.1.3
Probab=49.17 E-value=1e+02 Score=28.65 Aligned_cols=70 Identities=10% Similarity=-0.006 Sum_probs=40.1
Q ss_pred cCCceEEEEecCCCCcchHHHHHHHHhCCCceEEE---cchHHHHHhhcCCEEEEcceeEeeCCCcccccchHHHHHHHh
Q 045642 222 KKRSFEVFIADGAPKFEGHILAKELDKKGLKAIVI---TDSAVFAMISRVNMVIVGVHAVMANGGVIAPAGLHVLALAAK 298 (406)
Q Consensus 222 ~~~~f~ViV~EsrP~~eG~~~a~~L~~~GI~vt~I---~Dsav~~~m~~vd~VllGAdav~~nG~vvnk~GT~~lAl~Ak 298 (406)
+..++++++.-. ++.+-+...+++.+..=+|.++ ...-+..+|+.+|.++... |+. .+=|-
T Consensus 227 ~~~~~~lv~~~g-~~~~~~~~l~~~~~~~~~v~~~g~~g~~~~~~~~~~ad~~v~~S-------------~g~--~lEA~ 290 (376)
T 1v4v_A 227 AFPHLTFVYPVH-LNPVVREAVFPVLKGVRNFVLLDPLEYGSMAALMRASLLLVTDS-------------GGL--QEEGA 290 (376)
T ss_dssp HCTTSEEEEECC-SCHHHHHHHHHHHTTCTTEEEECCCCHHHHHHHHHTEEEEEESC-------------HHH--HHHHH
T ss_pred hCCCeEEEEECC-CCHHHHHHHHHHhccCCCEEEECCCCHHHHHHHHHhCcEEEECC-------------cCH--HHHHH
Confidence 344567666522 2111123333333221256666 4456788999999887642 333 44677
Q ss_pred hCCCceEEe
Q 045642 299 KHDVPFVVV 307 (406)
Q Consensus 299 ~~~vPv~V~ 307 (406)
.+|+|+++.
T Consensus 291 a~G~PvI~~ 299 (376)
T 1v4v_A 291 ALGVPVVVL 299 (376)
T ss_dssp HTTCCEEEC
T ss_pred HcCCCEEec
Confidence 899999974
No 213
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=49.05 E-value=12 Score=34.15 Aligned_cols=48 Identities=15% Similarity=0.091 Sum_probs=28.9
Q ss_pred HHhhc-CCEEEEcceeEee---CCCcccccchHHHHHHHhhCCCceEEecCC
Q 045642 263 AMISR-VNMVIVGVHAVMA---NGGVIAPAGLHVLALAAKKHDVPFVVVAST 310 (406)
Q Consensus 263 ~~m~~-vd~VllGAdav~~---nG~vvnk~GT~~lAl~Ak~~~vPv~V~aes 310 (406)
.++.. +|.||--|-.... .---+|-.||..++-+|+..+++-+|.+.+
T Consensus 58 ~~~~~~~d~vih~a~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~v~~SS 109 (286)
T 3gpi_A 58 SIVHLRPEILVYCVAASEYSDEHYRLSYVEGLRNTLSALEGAPLQHVFFVSS 109 (286)
T ss_dssp TGGGGCCSEEEECHHHHHHC-----CCSHHHHHHHHHHTTTSCCCEEEEEEE
T ss_pred HhhcCCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCEEEEEcc
Confidence 34444 7777754421100 011246789999999999999876665554
No 214
>3nra_A Aspartate aminotransferase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: LLP; 2.15A {Rhodobacter sphaeroides}
Probab=48.92 E-value=47 Score=31.41 Aligned_cols=115 Identities=12% Similarity=0.112 Sum_probs=61.2
Q ss_pred HHHHHHHHHHHhcc----c-CcEEEeccChHHHHHHHHHHHHcCCceEEEEecCCCCcchHHHHHHHHhCCCceEEEcc-
Q 045642 185 CREGIAEQAMELIH----Q-NEVILTLGHSKFVKEFLCAAKEKKRSFEVFIADGAPKFEGHILAKELDKKGLKAIVITD- 258 (406)
Q Consensus 185 ~~~~I~~~a~~~I~----~-g~~ILT~g~S~tV~~~L~~A~~~~~~f~ViV~EsrP~~eG~~~a~~L~~~GI~vt~I~D- 258 (406)
..+.+++...++.. . ..+++|.|.+..+..++..+.+.| -+|++. .|.+.+.. ..+...|.++..++-
T Consensus 83 l~~~l~~~l~~~~g~~~~~~~~i~~~~g~~~a~~~~~~~l~~~g--d~vl~~--~~~~~~~~--~~~~~~g~~~~~~~~~ 156 (407)
T 3nra_A 83 IRDLLAPRLAAFTGAPVDARDGLIITPGTQGALFLAVAATVARG--DKVAIV--QPDYFANR--KLVEFFEGEMVPVQLD 156 (407)
T ss_dssp HHHHHHHHHHHHHTSCCCTTTSEEEESHHHHHHHHHHHTTCCTT--CEEEEE--ESCCTHHH--HHHHHTTCEEEEEEBC
T ss_pred HHHHHHHHHHHHhCCCCCCCCcEEEeCCcHHHHHHHHHHhCCCC--CEEEEc--CCcccchH--HHHHHcCCEEEEeecc
Confidence 34445544444433 2 467787777767666666554333 355553 36666533 344557887776652
Q ss_pred -------------hHHHHHhh-cCCEEEEcceeEeeCCCcccccchHHHHHHHhhCCCceEE
Q 045642 259 -------------SAVFAMIS-RVNMVIVGVHAVMANGGVIAPAGLHVLALAAKKHDVPFVV 306 (406)
Q Consensus 259 -------------sav~~~m~-~vd~VllGAdav~~nG~vvnk~GT~~lAl~Ak~~~vPv~V 306 (406)
..+-..+. +...|++ ...--+.|.+...---..++-+|+.|++++++
T Consensus 157 ~~~~~~~~~~~d~~~l~~~l~~~~~~v~~-~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~ 217 (407)
T 3nra_A 157 YVSADETRAGLDLTGLEEAFKAGARVFLF-SNPNNPAGVVYSAEEIGQIAALAARYGATVIA 217 (407)
T ss_dssp CCSSCCSSCCBCHHHHHHHHHTTCCEEEE-ESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEE
T ss_pred cccccCcCCCcCHHHHHHHHhhCCcEEEE-cCCCCCCCcccCHHHHHHHHHHHHHcCCEEEE
Confidence 23333333 4444444 22212224433333344567788999998886
No 215
>3hdj_A Probable ornithine cyclodeaminase; APC62486, bordetella pertussis TOH structural genomics, PSI-2, protein structure initiative; 1.70A {Bordetella pertussis}
Probab=48.90 E-value=65 Score=30.54 Aligned_cols=78 Identities=10% Similarity=0.132 Sum_probs=50.4
Q ss_pred HHHHhcc--cCcEEEeccChHHHHHHHHHHHHcCCceEEEEecCCCCcchHHHHHHHHh-CCCceEEEcchHHHHHhhcC
Q 045642 192 QAMELIH--QNEVILTLGHSKFVKEFLCAAKEKKRSFEVFIADGAPKFEGHILAKELDK-KGLKAIVITDSAVFAMISRV 268 (406)
Q Consensus 192 ~a~~~I~--~g~~ILT~g~S~tV~~~L~~A~~~~~~f~ViV~EsrP~~eG~~~a~~L~~-~GI~vt~I~Dsav~~~m~~v 268 (406)
-+++++. +..+|+.+|....-...++...+...--+|+|..-. .-..+++++.+ .|+++... | ....++++
T Consensus 111 laa~~La~~~~~~v~iIGaG~~a~~~~~al~~~~~~~~V~v~~r~---~a~~la~~l~~~~g~~~~~~-~--~~eav~~a 184 (313)
T 3hdj_A 111 LAAGALARPRSSVLGLFGAGTQGAEHAAQLSARFALEAILVHDPY---ASPEILERIGRRCGVPARMA-A--PADIAAQA 184 (313)
T ss_dssp HHHHHHSCTTCCEEEEECCSHHHHHHHHHHHHHSCCCEEEEECTT---CCHHHHHHHHHHHTSCEEEC-C--HHHHHHHC
T ss_pred HHHHhhccCCCcEEEEECccHHHHHHHHHHHHhCCCcEEEEECCc---HHHHHHHHHHHhcCCeEEEe-C--HHHHHhhC
Confidence 3445552 456888899876666666555433333466776655 45677777764 48887766 4 45567899
Q ss_pred CEEEEcc
Q 045642 269 NMVIVGV 275 (406)
Q Consensus 269 d~VllGA 275 (406)
|.|+...
T Consensus 185 DIVi~aT 191 (313)
T 3hdj_A 185 DIVVTAT 191 (313)
T ss_dssp SEEEECC
T ss_pred CEEEEcc
Confidence 9999764
No 216
>3nmy_A Xometc, cystathionine gamma-lyase-like protein; Cys-Met metabolism PLP-dependent enzyme family, CYST gamma lyase, pyridoxal-phosphate; HET: PLP; 2.07A {Xanthomonas oryzae PV} SCOP: c.67.1.0 PDB: 3e6g_A* 3nnp_A*
Probab=48.89 E-value=43 Score=32.62 Aligned_cols=97 Identities=14% Similarity=0.110 Sum_probs=51.3
Q ss_pred cEEEeccChHHHHHHHHHHHHcCCceEEEEecCCCCcchH-H-HHHH-HHhCCCceEEEcchH---HHHHhh-cCCEEEE
Q 045642 201 EVILTLGHSKFVKEFLCAAKEKKRSFEVFIADGAPKFEGH-I-LAKE-LDKKGLKAIVITDSA---VFAMIS-RVNMVIV 273 (406)
Q Consensus 201 ~~ILT~g~S~tV~~~L~~A~~~~~~f~ViV~EsrP~~eG~-~-~a~~-L~~~GI~vt~I~Dsa---v~~~m~-~vd~Vll 273 (406)
+.+++-|.+..+.. +....+.| -+|++. .|.+.|. . +... +...|+++..+.-.- +...+. ++..|++
T Consensus 84 ~~~~~~sG~~Ai~~-~~~l~~~g--d~Vi~~--~~~y~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~i~~~~~~v~~ 158 (400)
T 3nmy_A 84 RAFAFASGMAATST-VMELLDAG--SHVVAM--DDLYGGTFRLFERVRRRTAGLDFSFVDLTDPAAFKAAIRADTKMVWI 158 (400)
T ss_dssp EEEEESSHHHHHHH-HHTTSCTT--CEEEEE--SSCCHHHHHHHHHTHHHHHCCEEEEECTTSHHHHHHHCCTTEEEEEE
T ss_pred CEEEecCHHHHHHH-HHHHcCCC--CEEEEe--CCCchHHHHHHHHhhHhhcCeEEEEECCCCHHHHHHHhccCCCEEEE
Confidence 45666555555554 33222223 355554 4666652 3 3333 667799999886332 333333 2333333
Q ss_pred cceeEeeCCCcccccchHHHHHHHhhCCCceEE
Q 045642 274 GVHAVMANGGVIAPAGLHVLALAAKKHDVPFVV 306 (406)
Q Consensus 274 GAdav~~nG~vvnk~GT~~lAl~Ak~~~vPv~V 306 (406)
+.+..-++.+.. -..++-+|++++++++|
T Consensus 159 --e~~~np~G~~~~--l~~i~~la~~~g~~liv 187 (400)
T 3nmy_A 159 --ETPTNPMLKLVD--IAAIAVIARKHGLLTVV 187 (400)
T ss_dssp --ESSCTTTCCCCC--HHHHHHHHHHTTCEEEE
T ss_pred --ECCCCCCCeeec--HHHHHHHHHHcCCEEEE
Confidence 233322222222 45677889999999887
No 217
>1qkk_A DCTD, C4-dicarboxylate transport transcriptional regulatory protein; receiver domain, 2-component signal transduction; 1.7A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1l5z_A 1l5y_A
Probab=48.48 E-value=63 Score=25.81 Aligned_cols=78 Identities=17% Similarity=0.284 Sum_probs=46.3
Q ss_pred ceEEEEecCCCCcchHHHHHHHHhCCCceEEEcchHHHHH-hh--cCCEEEEcceeEeeCCCcccccchHHHHHHHhh-C
Q 045642 225 SFEVFIADGAPKFEGHILAKELDKKGLKAIVITDSAVFAM-IS--RVNMVIVGVHAVMANGGVIAPAGLHVLALAAKK-H 300 (406)
Q Consensus 225 ~f~ViV~EsrP~~eG~~~a~~L~~~GI~vt~I~Dsav~~~-m~--~vd~VllGAdav~~nG~vvnk~GT~~lAl~Ak~-~ 300 (406)
+.+|.|++..|.. ...+...|...|+.|....+..-+.- +. ..|.||+..+. -...|.-.+..+-+. .
T Consensus 3 ~~~ILivdd~~~~-~~~l~~~L~~~g~~v~~~~~~~~a~~~l~~~~~dliild~~l-------~~~~g~~~~~~l~~~~~ 74 (155)
T 1qkk_A 3 APSVFLIDDDRDL-RKAMQQTLELAGFTVSSFASATEALAGLSADFAGIVISDIRM-------PGMDGLALFRKILALDP 74 (155)
T ss_dssp -CEEEEECSCHHH-HHHHHHHHHHTTCEEEEESCHHHHHHTCCTTCCSEEEEESCC-------SSSCHHHHHHHHHHHCT
T ss_pred CCEEEEEeCCHHH-HHHHHHHHHHcCcEEEEECCHHHHHHHHHhCCCCEEEEeCCC-------CCCCHHHHHHHHHhhCC
Confidence 4678888877643 23566777788888887666433322 22 36777776542 122344444444333 4
Q ss_pred CCceEEecCC
Q 045642 301 DVPFVVVAST 310 (406)
Q Consensus 301 ~vPv~V~aes 310 (406)
++|+++++..
T Consensus 75 ~~pii~ls~~ 84 (155)
T 1qkk_A 75 DLPMILVTGH 84 (155)
T ss_dssp TSCEEEEECG
T ss_pred CCCEEEEECC
Confidence 7999998764
No 218
>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2
Probab=48.48 E-value=29 Score=31.50 Aligned_cols=92 Identities=23% Similarity=0.180 Sum_probs=50.4
Q ss_pred CcEEEeccChHHHHHHHHHHHHcCCceEEEEecCCCCcchHHHHHHHHhCCCceEEEcc-hHHHHHhh--cCCEEEEcce
Q 045642 200 NEVILTLGHSKFVKEFLCAAKEKKRSFEVFIADGAPKFEGHILAKELDKKGLKAIVITD-SAVFAMIS--RVNMVIVGVH 276 (406)
Q Consensus 200 g~~ILT~g~S~tV~~~L~~A~~~~~~f~ViV~EsrP~~eG~~~a~~L~~~GI~vt~I~D-sav~~~m~--~vd~VllGAd 276 (406)
..+||+.|.++.+=..|.... ..+..+|+++.-++. + +.| .++..++. ++|.||--|-
T Consensus 12 ~~~vlVtGatG~iG~~l~~~L-~~~g~~V~~~~r~~~---------------D---l~d~~~~~~~~~~~~~d~vih~A~ 72 (292)
T 1vl0_A 12 HMKILITGANGQLGREIQKQL-KGKNVEVIPTDVQDL---------------D---ITNVLAVNKFFNEKKPNVVINCAA 72 (292)
T ss_dssp CEEEEEESTTSHHHHHHHHHH-TTSSEEEEEECTTTC---------------C---TTCHHHHHHHHHHHCCSEEEECCC
T ss_pred cceEEEECCCChHHHHHHHHH-HhCCCeEEeccCccC---------------C---CCCHHHHHHHHHhcCCCEEEECCc
Confidence 456777777776666555544 223467776643311 0 112 23444555 5666665442
Q ss_pred eEeeC--------CCcccccchHHHHHHHhhCCCceEEecCC
Q 045642 277 AVMAN--------GGVIAPAGLHVLALAAKKHDVPFVVVAST 310 (406)
Q Consensus 277 av~~n--------G~vvnk~GT~~lAl~Ak~~~vPv~V~aes 310 (406)
....+ ---+|-.|+..++-+|+..++.|+.++..
T Consensus 73 ~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~~iv~~SS~ 114 (292)
T 1vl0_A 73 HTAVDKCEEQYDLAYKINAIGPKNLAAAAYSVGAEIVQISTD 114 (292)
T ss_dssp CCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHTCEEEEEEEG
T ss_pred cCCHHHHhcCHHHHHHHHHHHHHHHHHHHHHcCCeEEEechH
Confidence 21100 01235678999999998888866655543
No 219
>3l4e_A Uncharacterized peptidase LMO0363; hypothetical protein LMO0363, csgid, similar to peptidase E, hydrolase, protease, serine protease; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=48.43 E-value=23 Score=31.66 Aligned_cols=107 Identities=10% Similarity=0.036 Sum_probs=59.0
Q ss_pred EEeccChHHHHHHHHHHHHcCCceEEEEec--CC-CCc--chHHHHHHHHhCCCceEEEc----ch-HHHHHhhcCCEEE
Q 045642 203 ILTLGHSKFVKEFLCAAKEKKRSFEVFIAD--GA-PKF--EGHILAKELDKKGLKAIVIT----DS-AVFAMISRVNMVI 272 (406)
Q Consensus 203 ILT~g~S~tV~~~L~~A~~~~~~f~ViV~E--sr-P~~--eG~~~a~~L~~~GI~vt~I~----Ds-av~~~m~~vd~Vl 272 (406)
++-.|++..+...|..-.++-..-+|.++. +. |.. -.+...+.|.+.|+++..+. +. .....+.++|.++
T Consensus 5 l~l~s~~~~~~~~~~~f~~~~~~~~i~~Ip~As~~~~~~~~~~s~~~a~~~lG~~v~~~~i~~~~~~~~~~~l~~ad~I~ 84 (206)
T 3l4e_A 5 LFLTSSFKDVVPLFTEFESNLQGKTVTFIPTASTVEEVTFYVEAGKKALESLGLLVEELDIATESLGEITTKLRKNDFIY 84 (206)
T ss_dssp EEEESCGGGCHHHHHHHSCCCTTCEEEEECGGGGGCSCCHHHHHHHHHHHHTTCEEEECCTTTSCHHHHHHHHHHSSEEE
T ss_pred eEEeecccchHHHHHHHHHHcCCCEEEEECCCCCCCCHHHHHHHHHHHHHHcCCeEEEEEecCCChHHHHHHHHhCCEEE
Confidence 555687777777777653222234555544 33 122 23677889999999998883 32 3335577888888
Q ss_pred EcceeEeeCCCcccccchHHHHHHHhhCCCceEEecC
Q 045642 273 VGVHAVMANGGVIAPAGLHVLALAAKKHDVPFVVVAS 309 (406)
Q Consensus 273 lGAdav~~nG~vvnk~GT~~lAl~Ak~~~vPv~V~ae 309 (406)
++-=..+.=...+.+.|-..+-.-+-..|+|++-.|-
T Consensus 85 l~GG~~~~l~~~L~~~gl~~~l~~~~~~G~p~~G~sA 121 (206)
T 3l4e_A 85 VTGGNTFFLLQELKRTGADKLILEEIAAGKLYIGESA 121 (206)
T ss_dssp ECCSCHHHHHHHHHHHTHHHHHHHHHHTTCEEEEETH
T ss_pred ECCCCHHHHHHHHHHCChHHHHHHHHHcCCeEEEECH
Confidence 8521000000122233433333333346899997653
No 220
>1cs1_A CGS, protein (cystathionine gamma-synthase); lyase, LLP-dependent enzymes, methionine biosynthesis; HET: LLP DHD; 1.50A {Escherichia coli} SCOP: c.67.1.3
Probab=48.38 E-value=1.8e+02 Score=27.34 Aligned_cols=98 Identities=11% Similarity=0.072 Sum_probs=52.9
Q ss_pred cEEEeccChHHHHHHHHHHHHcCCceEEEEecCCCCcchH-HHHHH-HHhCCCceEEEcc---hHHHHHh-hcCCEEEEc
Q 045642 201 EVILTLGHSKFVKEFLCAAKEKKRSFEVFIADGAPKFEGH-ILAKE-LDKKGLKAIVITD---SAVFAMI-SRVNMVIVG 274 (406)
Q Consensus 201 ~~ILT~g~S~tV~~~L~~A~~~~~~f~ViV~EsrP~~eG~-~~a~~-L~~~GI~vt~I~D---sav~~~m-~~vd~VllG 274 (406)
+.|++.+.+..+..+++.+.+ +.-+|++.+ |.+.|. ...+. +...|+++..++- ..+...+ +++..|++-
T Consensus 69 ~~i~~~sGt~a~~~~~~~~~~--~g~~vl~~~--~~~~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~i~~~~~~v~~~ 144 (386)
T 1cs1_A 69 GAVLTNTGMSAIHLVTTVFLK--PGDLLVAPH--DCYGGSYRLFDSLAKRGCYRVLFVDQGDEQALRAALAEKPKLVLVE 144 (386)
T ss_dssp EEEEESSHHHHHHHHHHHHCC--TTCEEEEET--TCCHHHHHHHHHHHTTTSCEEEEECTTCHHHHHHHHHTCCSEEEEE
T ss_pred cEEEeCCHHHHHHHHHHHHhC--CCCEEEEec--CCcHhHHHHHHHHHHhcCCEEEEeCCCCHHHHHHhhccCCcEEEEe
Confidence 455554446555555555542 334566654 667663 32333 3567999888863 2333333 345555543
Q ss_pred ceeEeeCCCcccccchHHHHHHHhhCCCceEE
Q 045642 275 VHAVMANGGVIAPAGLHVLALAAKKHDVPFVV 306 (406)
Q Consensus 275 Adav~~nG~vvnk~GT~~lAl~Ak~~~vPv~V 306 (406)
.+...+|.+.. -..++-+|+++++++++
T Consensus 145 --~~~nptG~~~~--l~~i~~l~~~~~~~li~ 172 (386)
T 1cs1_A 145 --SPSNPLLRVVD--IAKICHLAREVGAVSVV 172 (386)
T ss_dssp --CSCTTTCCCCC--HHHHHHHHHHTTCEEEE
T ss_pred --CCCCCCCcccC--HHHHHHHHHHcCCEEEE
Confidence 22222233322 35677788999998776
No 221
>3d3u_A 4-hydroxybutyrate COA-transferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.80A {Porphyromonas gingivalis}
Probab=48.30 E-value=1.4e+02 Score=29.54 Aligned_cols=152 Identities=12% Similarity=0.092 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHhcccCcEEEeccChHHHHHHHHHHHHcCCceEE-----------------------------EEecCC
Q 045642 184 TCREGIAEQAMELIHQNEVILTLGHSKFVKEFLCAAKEKKRSFEV-----------------------------FIADGA 234 (406)
Q Consensus 184 ~~~~~I~~~a~~~I~~g~~ILT~g~S~tV~~~L~~A~~~~~~f~V-----------------------------iV~Esr 234 (406)
...+.|+++++++|.+|.++- +|-...=..+...+. .++.+.+ .+.--.
T Consensus 194 ~~~~~Ia~~~a~~i~dg~~lq-lGiG~ip~av~~~l~-~~~~l~i~te~~~~~~~~l~~~G~~~~~~~~~~~g~~~~~~~ 271 (439)
T 3d3u_A 194 DLELRIGQNCASLIKDGDTLQ-LGIGGIPDAVLRALE-GHKDLGIHTEMFTDGVMRMIRKGIINGKKKTLHPEKVVTSLI 271 (439)
T ss_dssp HHHHHHHHHHHTTCCTTCEEE-ECSSHHHHHHHHTTT-TCCSBEEECSCBCHHHHHHHHHTCBCCSSCSSSTTSEEESBB
T ss_pred hHHHHHHHHHHHhcCCCCEEE-eccchHHHHHHHHHh-hCCCceEEEEEecchhHhhccCCcccccccccCCCceeEEEc
Q ss_pred CCcchHHHHHHHHhCCCceEEEcchHH--HHHhhcC--CEEEEcceeEeeCCCccc-ccchHH----------HHHHHhh
Q 045642 235 PKFEGHILAKELDKKGLKAIVITDSAV--FAMISRV--NMVIVGVHAVMANGGVIA-PAGLHV----------LALAAKK 299 (406)
Q Consensus 235 P~~eG~~~a~~L~~~GI~vt~I~Dsav--~~~m~~v--d~VllGAdav~~nG~vvn-k~GT~~----------lAl~Ak~ 299 (406)
+ |-.-....-...=.+.+++-.-+ .+.+.+. |..|+||=-|-.+|.+-+ .+|+.. ++-+...
T Consensus 272 ~---g~~~~y~~~~~~~~~~~~~~~~~n~p~~i~~~~~dv~i~ga~evD~~G~vn~~~~g~~~~~G~GG~~D~~~~A~~s 348 (439)
T 3d3u_A 272 F---GSKELYDFVNNNPVIECYPVDYINNPDVIGKNDRMVSINSCLEMDLMGQAASESIGYEQFSGSGGQVDFLRGAKRS 348 (439)
T ss_dssp C---CCHHHHHHHTTCTTEEECBHHHHTCHHHHHHSSSEEEEECCSCEETTSCC--------------CHHHHHHHHTTS
T ss_pred c---CchHHHHHhcCCCCEEEEeccccCCHHHhhccCCcEEEehheEecCCCCEeeeccCCeeecccccHHHHhhccccc
Q ss_pred CCCceEEecCCc-------cccccCCCCccccccccCCcccccccCCcccccccCcCCCCCcccccCCcceecCCCCccE
Q 045642 300 HDVPFVVVASTH-------ELCSLYPHNLEVLLNEMRCPSELLNFEEFSDCIDYGIASSSSLLHVVNPAFDYVPPELIRL 372 (406)
Q Consensus 300 ~~vPv~V~aes~-------K~~~~~~~d~~~i~~e~~~p~ev~~~~~~~~~~~~~~~~~~~~v~v~np~fD~tPp~lIt~ 372 (406)
.+-.+++++++. ||.+....+... .||-+-++.
T Consensus 349 ~~gk~ii~~~~t~k~G~~s~iv~~~~~g~~v----------------------------------------~~~~~~v~~ 388 (439)
T 3d3u_A 349 KGGISIMAFPSTAKKGTESRIVPILKEGACV----------------------------------------TTGRNEVDY 388 (439)
T ss_dssp TTCEEEEECCSEETTTTEESEESSCC----------------------------------------------CCSTTCSE
T ss_pred CCCeEEEEEeeecCCCCCCeEeECccCCCCc----------------------------------------eeCCCcceE
Q ss_pred EEeCCCCC
Q 045642 373 FVTDIGGY 380 (406)
Q Consensus 373 iITE~G~~ 380 (406)
||||.|+.
T Consensus 389 vVTE~gva 396 (439)
T 3d3u_A 389 VVTEYGVA 396 (439)
T ss_dssp EEETTEEE
T ss_pred EECCCEEE
No 222
>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=48.26 E-value=1.4e+02 Score=26.27 Aligned_cols=109 Identities=8% Similarity=0.086 Sum_probs=65.0
Q ss_pred cCcEEEeccChHHHHHHHHHHHHcCCceEEEEecCCCCcchHHHHHHHHhCCCceEEEc-c----hHHHHHhh-------
Q 045642 199 QNEVILTLGHSKFVKEFLCAAKEKKRSFEVFIADGAPKFEGHILAKELDKKGLKAIVIT-D----SAVFAMIS------- 266 (406)
Q Consensus 199 ~g~~ILT~g~S~tV~~~L~~A~~~~~~f~ViV~EsrP~~eG~~~a~~L~~~GI~vt~I~-D----sav~~~m~------- 266 (406)
.+.+||..|.|+.+=..+..... .+..+|+++..+...........+.+.|.++..+. | .++..++.
T Consensus 12 ~~k~vlITGas~giG~~ia~~l~-~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 90 (256)
T 3ezl_A 12 SQRIAYVTGGMGGIGTSICQRLH-KDGFRVVAGCGPNSPRRVKWLEDQKALGFDFYASEGNVGDWDSTKQAFDKVKAEVG 90 (256)
T ss_dssp -CEEEEETTTTSHHHHHHHHHHH-HTTEEEEEEECTTCSSHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHTC
T ss_pred CCCEEEEECCCChHHHHHHHHHH-HCCCEEEEEeCCCHHHHHHHHHHHHhcCCeeEEEecCCCCHHHHHHHHHHHHHhcC
Confidence 56788888988877766655442 23578888876666666777888888887776542 3 23344443
Q ss_pred cCCEEEEcceeEeeCCCc-------------ccccchHHHHHHH----hhCCCceEEecC
Q 045642 267 RVNMVIVGVHAVMANGGV-------------IAPAGLHVLALAA----KKHDVPFVVVAS 309 (406)
Q Consensus 267 ~vd~VllGAdav~~nG~v-------------vnk~GT~~lAl~A----k~~~vPv~V~ae 309 (406)
++|.+|-.|- +...+.+ +|-.|++.++.++ +..+...+|...
T Consensus 91 ~id~lv~~Ag-~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~is 149 (256)
T 3ezl_A 91 EIDVLVNNAG-ITRDVVFRKMTREDWQAVIDTNLTSLFNVTKQVIDGMVERGWGRIINIS 149 (256)
T ss_dssp CEEEEEECCC-CCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEC
T ss_pred CCCEEEECCC-CCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEc
Confidence 5677766553 2222221 3667777766554 233444444433
No 223
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*
Probab=48.17 E-value=1.2e+02 Score=27.67 Aligned_cols=100 Identities=16% Similarity=0.210 Sum_probs=62.0
Q ss_pred cCcEEEeccChHHHHHHHHHHH-HcCCceEEEEecCCCCcchHHHHHHHHhCCCceEEE-cc----hHHHHHhh------
Q 045642 199 QNEVILTLGHSKFVKEFLCAAK-EKKRSFEVFIADGAPKFEGHILAKELDKKGLKAIVI-TD----SAVFAMIS------ 266 (406)
Q Consensus 199 ~g~~ILT~g~S~tV~~~L~~A~-~~~~~f~ViV~EsrP~~eG~~~a~~L~~~GI~vt~I-~D----sav~~~m~------ 266 (406)
.|.+||+.|.++-+=..+.... ++ ..+|+++..++......+.+.+.+.|..+.++ .| .++..++.
T Consensus 46 ~gk~vlVTGas~GIG~aia~~la~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 123 (291)
T 3ijr_A 46 KGKNVLITGGDSGIGRAVSIAFAKE--GANIAIAYLDEEGDANETKQYVEKEGVKCVLLPGDLSDEQHCKDIVQETVRQL 123 (291)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEESCTTSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEeCCchHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHc
Confidence 4678888888887766664443 33 46788877665434456667777788877765 33 23333333
Q ss_pred -cCCEEEEcceeEeeCCCc-------------ccccchHHHHHHHhhC
Q 045642 267 -RVNMVIVGVHAVMANGGV-------------IAPAGLHVLALAAKKH 300 (406)
Q Consensus 267 -~vd~VllGAdav~~nG~v-------------vnk~GT~~lAl~Ak~~ 300 (406)
++|.+|-.|-.....+.+ +|-.|++.++.++..+
T Consensus 124 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~ 171 (291)
T 3ijr_A 124 GSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSH 171 (291)
T ss_dssp SSCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTT
T ss_pred CCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 688888766433322322 3667888888877664
No 224
>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A
Probab=48.16 E-value=40 Score=31.94 Aligned_cols=68 Identities=7% Similarity=0.020 Sum_probs=35.5
Q ss_pred CcchHHHHHHHHhCCC-ceEEEc---c-hHHHHHhhcCCEEEEcceeEeeC----CCcccccchHHHHHHHhhCCCc
Q 045642 236 KFEGHILAKELDKKGL-KAIVIT---D-SAVFAMISRVNMVIVGVHAVMAN----GGVIAPAGLHVLALAAKKHDVP 303 (406)
Q Consensus 236 ~~eG~~~a~~L~~~GI-~vt~I~---D-sav~~~m~~vd~VllGAdav~~n----G~vvnk~GT~~lAl~Ak~~~vP 303 (406)
++-|+.+++.|.+.|. +|+.+. | ..+..+++++|.||--|-..-.. ---.|-.|+..++-+|+..+++
T Consensus 10 G~iG~~l~~~L~~~g~~~v~~~d~~~d~~~l~~~~~~~d~Vih~a~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~ 86 (369)
T 3st7_A 10 GFVGKNLKADLTSTTDHHIFEVHRQTKEEELESALLKADFIVHLAGVNRPEHDKEFSLGNVSYLDHVLDILTRNTKK 86 (369)
T ss_dssp SHHHHHHHHHHHHHCCCEEEECCTTCCHHHHHHHHHHCSEEEECCCSBCTTCSTTCSSSCCBHHHHHHHHHTTCSSC
T ss_pred CHHHHHHHHHHHhCCCCEEEEECCCCCHHHHHHHhccCCEEEECCcCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 3444555555555554 433321 1 24455566677776544221110 1123667788888888877765
No 225
>3gju_A Putative aminotransferase; pyridoxal phosphate, PLP-dependent transferase-like fold, ST genomics, joint center for structural genomics, JCSG; HET: MSE LLP PLP; 1.55A {Mesorhizobium loti} PDB: 3fcr_A*
Probab=48.15 E-value=1.6e+02 Score=28.67 Aligned_cols=140 Identities=14% Similarity=0.159 Sum_probs=71.4
Q ss_pred HHHHHHHHHHHHHHH------HHHHHHHHHHHHHHHHhc--ccCcEEEeccChHHHHHHHHHHHHc------CCceEEEE
Q 045642 165 KKLKSELIKAVNELI------EDINTCREGIAEQAMELI--HQNEVILTLGHSKFVKEFLCAAKEK------KRSFEVFI 230 (406)
Q Consensus 165 ~~~k~~l~~~i~~~~------~e~~~~~~~I~~~a~~~I--~~g~~ILT~g~S~tV~~~L~~A~~~------~~~f~ViV 230 (406)
+++++.+.+.++.+. .-.......+++.-+++. ....+++|.|.|..+..+|+.+..- ..+-+|++
T Consensus 70 p~v~~A~~~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~~~v~~~~gGseA~~~al~~~~~~~~~~g~~~~~~vi~ 149 (460)
T 3gju_A 70 QKIADAIATQAKNLAYYHAYVGHGTEASITLAKMIIDRAPKGMSRVYFGLSGSDANETNIKLIWYYNNVLGRPEKKKIIS 149 (460)
T ss_dssp HHHHHHHHHHHHHHSCCCCCTTCCCHHHHHHHHHHHHHSCTTEEEEEEESSHHHHHHHHHHHHHHHHHHTTCTTCCEEEE
T ss_pred HHHHHHHHHHHHhccccccccccCCHHHHHHHHHHHhhCCCCcCEEEEeCchHHHHHHHHHHHHHHHHhcCCCCCCEEEE
Confidence 556666666665532 000112233444444444 2335788888888888888887641 12345565
Q ss_pred ecCCCCcchH-HHHHHHHh----------CCCceEEEc--c-------------------hHHHHHhhc---CCEEEEcc
Q 045642 231 ADGAPKFEGH-ILAKELDK----------KGLKAIVIT--D-------------------SAVFAMISR---VNMVIVGV 275 (406)
Q Consensus 231 ~EsrP~~eG~-~~a~~L~~----------~GI~vt~I~--D-------------------sav~~~m~~---vd~VllGA 275 (406)
.+ |.+.|. ..+..+.. .+-.+..++ . .++-..+.+ -+..++=+
T Consensus 150 ~~--~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~~~~~~le~~i~~~~~~~~aaii~ 227 (460)
T 3gju_A 150 RW--RGYHGSGVMTGSLTGLDLFHNAFDLPRAPVLHTEAPYYFRRTDRSMSEEQFSQHCADKLEEMILAEGPETIAAFIG 227 (460)
T ss_dssp ET--TCCCCSSHHHHHHCCCGGGTTTTTCSCTTEEEECCCCGGGCSCTTCCHHHHHHHHHHHHHHHHHHHCGGGEEEEEE
T ss_pred EC--CCcCCCCHHHhhccCCcccccccCCCCCCCEEeCCCccccCCccccChhHHHHHHHHHHHHHHHhcCCCCEEEEEE
Confidence 44 334443 22222211 111334443 1 233333431 12233333
Q ss_pred eeEeeCCCcc-cccch-HHHHHHHhhCCCceEE
Q 045642 276 HAVMANGGVI-APAGL-HVLALAAKKHDVPFVV 306 (406)
Q Consensus 276 dav~~nG~vv-nk~GT-~~lAl~Ak~~~vPv~V 306 (406)
+.+..+||.+ -.-+- ..++-+|++|++.+++
T Consensus 228 ep~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~ 260 (460)
T 3gju_A 228 EPILGTGGIVPPPAGYWEKIQAVLKKYDVLLVA 260 (460)
T ss_dssp CSSBSTTTSBCCCTTHHHHHHHHHHHTTCEEEE
T ss_pred CCccCCCCCccCCHHHHHHHHHHHHHcCCEEEE
Confidence 4577777664 34442 3477789999998875
No 226
>1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A*
Probab=48.06 E-value=49 Score=31.46 Aligned_cols=111 Identities=15% Similarity=0.170 Sum_probs=57.5
Q ss_pred CcEEEeccChHHHHHHHHHHHHcCCceEEEEecCCCCcc--------hHHHHHHHHhC-C----Cc---eEEE-cc----
Q 045642 200 NEVILTLGHSKFVKEFLCAAKEKKRSFEVFIADGAPKFE--------GHILAKELDKK-G----LK---AIVI-TD---- 258 (406)
Q Consensus 200 g~~ILT~g~S~tV~~~L~~A~~~~~~f~ViV~EsrP~~e--------G~~~a~~L~~~-G----I~---vt~I-~D---- 258 (406)
+.+||+.|.++.+=..|.....+.+..+|+++...+... -..+.+.+.+. + -. +.++ .|
T Consensus 2 ~m~vlVTGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~ 81 (397)
T 1gy8_A 2 HMRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRNE 81 (397)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTCH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHhCCCEEEEEecCCcccccccccchHHHHHHHHHHhhccccccCCceEEEEECCCCCH
Confidence 347888888777666554443201336788776444322 22333223332 1 01 3332 33
Q ss_pred hHHHHHhh--c-CCEEEEcceeEeeCC--------CcccccchHHHHHHHhhCCCceEEecCC
Q 045642 259 SAVFAMIS--R-VNMVIVGVHAVMANG--------GVIAPAGLHVLALAAKKHDVPFVVVAST 310 (406)
Q Consensus 259 sav~~~m~--~-vd~VllGAdav~~nG--------~vvnk~GT~~lAl~Ak~~~vPv~V~aes 310 (406)
.++..++. . +|.||--|-...... --+|-.||..+.-+|+..++.-+|...+
T Consensus 82 ~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~~~iv~~SS 144 (397)
T 1gy8_A 82 DFLNGVFTRHGPIDAVVHMCAFLAVGESVRDPLKYYDNNVVGILRLLQAMLLHKCDKIIFSSS 144 (397)
T ss_dssp HHHHHHHHHSCCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEE
T ss_pred HHHHHHHHhcCCCCEEEECCCccCcCcchhhHHHHHHHHhHHHHHHHHHHHHhCCCEEEEECC
Confidence 24455565 3 666665542211000 0125679999999999988865555444
No 227
>1m32_A 2-aminoethylphosphonate-pyruvate aminotransferase; PLP-dependent aminotransferase fold; HET: PLP; 2.20A {Salmonella typhimurium} SCOP: c.67.1.3
Probab=47.97 E-value=76 Score=29.14 Aligned_cols=99 Identities=17% Similarity=0.176 Sum_probs=52.4
Q ss_pred cEEEeccChHHHHHHHHHHHHcCCceEEEEecCCCCcchHHHHHHHHhCCCceEEEcc--------hHHHHHhhc--CCE
Q 045642 201 EVILTLGHSKFVKEFLCAAKEKKRSFEVFIADGAPKFEGHILAKELDKKGLKAIVITD--------SAVFAMISR--VNM 270 (406)
Q Consensus 201 ~~ILT~g~S~tV~~~L~~A~~~~~~f~ViV~EsrP~~eG~~~a~~L~~~GI~vt~I~D--------sav~~~m~~--vd~ 270 (406)
.+++|.|.+..+..++..+.+.|. +|++.+ .|.+.. .....+...|+++..++- ..+-..+.+ -.+
T Consensus 58 ~v~~~~g~t~a~~~~~~~~~~~gd--~vi~~~-~~~~~~-~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~~~~ 133 (366)
T 1m32_A 58 SVLLQGSGSYAVEAVLGSALGPQD--KVLIVS-NGAYGA-RMVEMAGLMGIAHHAYDCGEVARPDVQAIDAILNADPTIS 133 (366)
T ss_dssp EEEEESCHHHHHHHHHHHSCCTTC--CEEEEE-SSHHHH-HHHHHHHHHTCCEEEEECCTTSCCCHHHHHHHHHHCTTCC
T ss_pred EEEEecChHHHHHHHHHHhcCCCC--eEEEEe-CCCccH-HHHHHHHHhCCceEEEeCCCCCCCCHHHHHHHHhcCCCeE
Confidence 477777777777767666643332 455553 333322 223344556888777641 223333432 123
Q ss_pred EEEcceeEeeCCCcccccchHHHHHHHhhCCCceEE
Q 045642 271 VIVGVHAVMANGGVIAPAGLHVLALAAKKHDVPFVV 306 (406)
Q Consensus 271 VllGAdav~~nG~vvnk~GT~~lAl~Ak~~~vPv~V 306 (406)
+|+-...-...|.+.. -..++-+|+++++++++
T Consensus 134 ~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~ 166 (366)
T 1m32_A 134 HIAMVHSETTTGMLNP---IDEVGALAHRYGKTYIV 166 (366)
T ss_dssp EEEEESEETTTTEECC---HHHHHHHHHHHTCEEEE
T ss_pred EEEEecccCCcceecC---HHHHHHHHHHcCCEEEE
Confidence 3332222122255554 34677788999998776
No 228
>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*
Probab=47.65 E-value=40 Score=31.38 Aligned_cols=102 Identities=17% Similarity=0.192 Sum_probs=54.9
Q ss_pred cEEEeccChHHHHHHHHHH-HHcCCceEEEEecCCCCc-----chHHHHHHHHh---CCCceEEEcc----hHHHHHhhc
Q 045642 201 EVILTLGHSKFVKEFLCAA-KEKKRSFEVFIADGAPKF-----EGHILAKELDK---KGLKAIVITD----SAVFAMISR 267 (406)
Q Consensus 201 ~~ILT~g~S~tV~~~L~~A-~~~~~~f~ViV~EsrP~~-----eG~~~a~~L~~---~GI~vt~I~D----sav~~~m~~ 267 (406)
.+||+.|.++.+=..|... .++| .+|+++.-.+.. +....++.|.+ .++.+. ..| .++..++..
T Consensus 3 ~~vlVtGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~r~~~~~~~~~~~l~~~~~~~~~~~-~~D~~~~~~~~~~~~~ 79 (348)
T 1ek6_A 3 EKVLVTGGAGYIGSHTVLELLEAG--YLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFE-EMDILDQGALQRLFKK 79 (348)
T ss_dssp SEEEEETTTSHHHHHHHHHHHHTT--CCEEEEECSSSSCBCSSSSBHHHHHHHHHHTCCCEEE-ECCTTCHHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHCC--CEEEEEecCCcccccccccHHHHHHHHhccCCceEEE-ECCCCCHHHHHHHHHh
Confidence 4688888877766655443 3344 567776533221 01122333432 344332 233 345555663
Q ss_pred CCEEEEcceeEeeCCCc---------------ccccchHHHHHHHhhCCCceEEecCC
Q 045642 268 VNMVIVGVHAVMANGGV---------------IAPAGLHVLALAAKKHDVPFVVVAST 310 (406)
Q Consensus 268 vd~VllGAdav~~nG~v---------------vnk~GT~~lAl~Ak~~~vPv~V~aes 310 (406)
. ++|.|+.+.+. +|-.|+..++-+|+..+++-+|.+.+
T Consensus 80 ~-----~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS 132 (348)
T 1ek6_A 80 Y-----SFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAHGVKNLVFSSS 132 (348)
T ss_dssp C-----CEEEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEE
T ss_pred c-----CCCEEEECCCCcCccchhhchHHHHHHHHHHHHHHHHHHHHhCCCEEEEECc
Confidence 1 34444444333 25578999999999988876665544
No 229
>1gc0_A Methionine gamma-lyase; pyridoxal-5'-phosphate; HET: LLP; 1.70A {Pseudomonas putida} SCOP: c.67.1.3 PDB: 1gc2_A* 1pg8_A* 1ukj_A* 2o7c_A*
Probab=47.63 E-value=84 Score=29.99 Aligned_cols=98 Identities=14% Similarity=0.100 Sum_probs=54.0
Q ss_pred CcEEEeccChHHHHHHHHHHHHcCCceEEEEecCCCCcchH-HHHHHH-HhCCCceEEEcch---HHHHHhh-cCCEEEE
Q 045642 200 NEVILTLGHSKFVKEFLCAAKEKKRSFEVFIADGAPKFEGH-ILAKEL-DKKGLKAIVITDS---AVFAMIS-RVNMVIV 273 (406)
Q Consensus 200 g~~ILT~g~S~tV~~~L~~A~~~~~~f~ViV~EsrP~~eG~-~~a~~L-~~~GI~vt~I~Ds---av~~~m~-~vd~Vll 273 (406)
.+.|++.|.+..+..++..+.+.| -+|++. .|.+.+. ..++.+ ...|+++..++-. .+...+. +...|++
T Consensus 81 ~~~i~~~sG~~a~~~~l~~~~~~g--d~vl~~--~~~~~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~i~~~~~~v~~ 156 (398)
T 1gc0_A 81 EAGLALASGMGAITSTLWTLLRPG--DEVLLG--NTLYGCTFAFLHHGIGEFGVKLRHVDMADLQALEAAMTPATRVIYF 156 (398)
T ss_dssp SEEEEESSHHHHHHHHHHHHCCTT--CEEEEE--SSCCSHHHHHHHHTGGGGTCEEEEECTTCHHHHHHHCCTTEEEEEE
T ss_pred CcEEEECCHHHHHHHHHHHHhcCC--CEEEEe--CCCchhHHHHHHHHHHHcCCEEEEECCCCHHHHHHhcCCCCeEEEE
Confidence 356666666666666666554333 355554 4566663 334443 5679999988632 2233332 2333333
Q ss_pred cceeEe-eCCCcccccchHHHHHHHhhCCCceEE
Q 045642 274 GVHAVM-ANGGVIAPAGLHVLALAAKKHDVPFVV 306 (406)
Q Consensus 274 GAdav~-~nG~vvnk~GT~~lAl~Ak~~~vPv~V 306 (406)
. .+. ..|.+. . -..++-+|+++++++++
T Consensus 157 ~--~~~nptG~~~-~--l~~i~~l~~~~~~~li~ 185 (398)
T 1gc0_A 157 E--SPANPNMHMA-D--IAGVAKIARKHGATVVV 185 (398)
T ss_dssp E--SSCTTTCCCC-C--HHHHHHHHGGGTCEEEE
T ss_pred E--CCCCCCcccc-c--HHHHHHHHHHcCCEEEE
Confidence 2 222 223333 2 35677889999998876
No 230
>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}
Probab=47.50 E-value=66 Score=28.91 Aligned_cols=102 Identities=18% Similarity=0.166 Sum_probs=63.6
Q ss_pred cCcEEEeccChHHHHHHHHHHHHcCCceEEEEecCCCCcchHHHHHHHHhCCCceEEE-cc----hHHHHHhh-------
Q 045642 199 QNEVILTLGHSKFVKEFLCAAKEKKRSFEVFIADGAPKFEGHILAKELDKKGLKAIVI-TD----SAVFAMIS------- 266 (406)
Q Consensus 199 ~g~~ILT~g~S~tV~~~L~~A~~~~~~f~ViV~EsrP~~eG~~~a~~L~~~GI~vt~I-~D----sav~~~m~------- 266 (406)
.|.++|+.|.|+-+=..+..... .+..+|+++..+........+.++.+.|-.+..+ .| .++..++.
T Consensus 7 ~~k~vlVTGas~GIG~aia~~la-~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 85 (259)
T 3edm_A 7 TNRTIVVAGAGRDIGRACAIRFA-QEGANVVLTYNGAAEGAATAVAEIEKLGRSALAIKADLTNAAEVEAAISAAADKFG 85 (259)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHH-HTTCEEEEEECSSCHHHHHHHHHHHTTTSCCEEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred CCCEEEEECCCchHHHHHHHHHH-HCCCEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHhC
Confidence 46788888888877665544431 2346788886666555567788888888776654 33 23444443
Q ss_pred cCCEEEEcceeEeeCCC-------------cccccchHHHHHHHhhCC
Q 045642 267 RVNMVIVGVHAVMANGG-------------VIAPAGLHVLALAAKKHD 301 (406)
Q Consensus 267 ~vd~VllGAdav~~nG~-------------vvnk~GT~~lAl~Ak~~~ 301 (406)
++|.+|-.|-.....+. -+|-.|++.++.++..+-
T Consensus 86 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~ 133 (259)
T 3edm_A 86 EIHGLVHVAGGLIARKTIAEMDEAFWHQVLDVNLTSLFLTAKTALPKM 133 (259)
T ss_dssp SEEEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHGGGE
T ss_pred CCCEEEECCCccCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 57777766533222222 246778888887776653
No 231
>3gt7_A Sensor protein; structural genomics, signal receiver domain, kinase, PSI-2, protein structure initiative; 2.30A {Syntrophus aciditrophicus SB}
Probab=47.44 E-value=80 Score=25.31 Aligned_cols=79 Identities=16% Similarity=0.316 Sum_probs=47.3
Q ss_pred CceEEEEecCCCCcchHHHHHHHHhCCCceEEEcchHHHH-Hhh--cCCEEEEcceeEeeCCCcccccchHHHHHHHhh-
Q 045642 224 RSFEVFIADGAPKFEGHILAKELDKKGLKAIVITDSAVFA-MIS--RVNMVIVGVHAVMANGGVIAPAGLHVLALAAKK- 299 (406)
Q Consensus 224 ~~f~ViV~EsrP~~eG~~~a~~L~~~GI~vt~I~Dsav~~-~m~--~vd~VllGAdav~~nG~vvnk~GT~~lAl~Ak~- 299 (406)
++.+|.|+|..|.. ...+...|.+.|..|....+..-+. .+. ..|.||+..+- .+ .-|.-.+..+-+.
T Consensus 6 ~~~~ILivdd~~~~-~~~l~~~L~~~g~~v~~~~~~~~al~~l~~~~~dlii~D~~l--~~-----~~g~~~~~~lr~~~ 77 (154)
T 3gt7_A 6 RAGEILIVEDSPTQ-AEHLKHILEETGYQTEHVRNGREAVRFLSLTRPDLIISDVLM--PE-----MDGYALCRWLKGQP 77 (154)
T ss_dssp -CCEEEEECSCHHH-HHHHHHHHHTTTCEEEEESSHHHHHHHHTTCCCSEEEEESCC--SS-----SCHHHHHHHHHHST
T ss_pred CCCcEEEEeCCHHH-HHHHHHHHHHCCCEEEEeCCHHHHHHHHHhCCCCEEEEeCCC--CC-----CCHHHHHHHHHhCC
Confidence 45678888877643 3456677777888887776654332 232 36778776542 22 2344444444333
Q ss_pred --CCCceEEecCC
Q 045642 300 --HDVPFVVVAST 310 (406)
Q Consensus 300 --~~vPv~V~aes 310 (406)
..+|+++++..
T Consensus 78 ~~~~~pii~~s~~ 90 (154)
T 3gt7_A 78 DLRTIPVILLTIL 90 (154)
T ss_dssp TTTTSCEEEEECC
T ss_pred CcCCCCEEEEECC
Confidence 57999998754
No 232
>3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora}
Probab=47.44 E-value=56 Score=30.76 Aligned_cols=22 Identities=23% Similarity=0.178 Sum_probs=16.7
Q ss_pred HHHHHHhhCCCceEEecCCccc
Q 045642 292 VLALAAKKHDVPFVVVASTHEL 313 (406)
Q Consensus 292 ~lAl~Ak~~~vPv~V~aes~K~ 313 (406)
...++|+..++|++.++..+-.
T Consensus 115 ~~~~aA~~~giP~v~~~~~~~~ 136 (402)
T 3ia7_A 115 AGRLLAARWDRPAVRLTGGFAA 136 (402)
T ss_dssp HHHHHHHHHTCCEEEEESSCCC
T ss_pred HHHHHHHhhCCCEEEEeccccc
Confidence 3467789999999998755543
No 233
>1jkx_A GART;, phosphoribosylglycinamide formyltransferase; purine biosynthesis, anti-cancer agent; HET: 138; 1.60A {Escherichia coli} SCOP: c.65.1.1 PDB: 1cdd_A 1cde_A* 1c2t_A* 1grc_A 1gar_A* 2gar_A 3gar_A 1c3e_A*
Probab=47.29 E-value=67 Score=28.72 Aligned_cols=70 Identities=17% Similarity=0.190 Sum_probs=40.9
Q ss_pred EEEeccChHHHHHHHHHHHHcCC-ceEEEEec-CCCCcchHHHHHHHHhCCCceEEEc----------chHHHHHhh--c
Q 045642 202 VILTLGHSKFVKEFLCAAKEKKR-SFEVFIAD-GAPKFEGHILAKELDKKGLKAIVIT----------DSAVFAMIS--R 267 (406)
Q Consensus 202 ~ILT~g~S~tV~~~L~~A~~~~~-~f~ViV~E-srP~~eG~~~a~~L~~~GI~vt~I~----------Dsav~~~m~--~ 267 (406)
.||.-|..+....++.... ++. .++|..+- .+|...|...| .+.||++..+. |..+...++ +
T Consensus 4 ~vl~Sg~gsnl~ali~~~~-~~~~~~~i~~Vis~~~~~~~~~~A---~~~gIp~~~~~~~~~~~r~~~~~~~~~~l~~~~ 79 (212)
T 1jkx_A 4 VVLISGNGSNLQAIIDACK-TNKIKGTVRAVFSNKADAFGLERA---RQAGIATHTLIASAFDSREAYDRELIHEIDMYA 79 (212)
T ss_dssp EEEESSCCHHHHHHHHHHH-TTSSSSEEEEEEESCTTCHHHHHH---HHTTCEEEECCGGGCSSHHHHHHHHHHHHGGGC
T ss_pred EEEEECCcHHHHHHHHHHH-cCCCCceEEEEEeCCCchHHHHHH---HHcCCcEEEeCcccccchhhccHHHHHHHHhcC
Confidence 4666676767666666555 443 45554333 44555564444 56899999875 234444444 4
Q ss_pred CCEEEEcc
Q 045642 268 VNMVIVGV 275 (406)
Q Consensus 268 vd~VllGA 275 (406)
+|.+++.+
T Consensus 80 ~Dliv~ag 87 (212)
T 1jkx_A 80 PDVVVLAG 87 (212)
T ss_dssp CSEEEESS
T ss_pred CCEEEEeC
Confidence 77777754
No 234
>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*
Probab=47.27 E-value=44 Score=29.18 Aligned_cols=106 Identities=16% Similarity=0.107 Sum_probs=63.2
Q ss_pred cCcEEEeccChHHHHHHHHHH-HHcCCceEEEEecCCCCcchHHHHHHHHhCCCceEEE--cc-hHHHHHhhcCCEEEEc
Q 045642 199 QNEVILTLGHSKFVKEFLCAA-KEKKRSFEVFIADGAPKFEGHILAKELDKKGLKAIVI--TD-SAVFAMISRVNMVIVG 274 (406)
Q Consensus 199 ~g~~ILT~g~S~tV~~~L~~A-~~~~~~f~ViV~EsrP~~eG~~~a~~L~~~GI~vt~I--~D-sav~~~m~~vd~VllG 274 (406)
.+.+||..|.++.+=..|... .+++...+|+++..+|.. ...+ ..++.+... .| .++..++.++|.||--
T Consensus 3 ~~~~ilVtGasG~iG~~l~~~l~~~~~g~~V~~~~r~~~~-----~~~~-~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~ 76 (253)
T 1xq6_A 3 NLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQG-----KEKI-GGEADVFIGDITDADSINPAFQGIDALVIL 76 (253)
T ss_dssp SCCEEEEESTTSHHHHHHHHHHHHTTTTCEEEEEESCHHH-----HHHT-TCCTTEEECCTTSHHHHHHHHTTCSEEEEC
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHhcCCCcEEEEEEcCCCc-----hhhc-CCCeeEEEecCCCHHHHHHHHcCCCEEEEe
Confidence 356788888887776655444 434335788887654311 1222 234443321 22 4667778889988876
Q ss_pred ceeEeeCC---------------------CcccccchHHHHHHHhhCCCceEEecCC
Q 045642 275 VHAVMANG---------------------GVIAPAGLHVLALAAKKHDVPFVVVAST 310 (406)
Q Consensus 275 Adav~~nG---------------------~vvnk~GT~~lAl~Ak~~~vPv~V~aes 310 (406)
|-.....+ --+|-.|+..++-+|+..+++-+|...+
T Consensus 77 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS 133 (253)
T 1xq6_A 77 TSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVAGVKHIVVVGS 133 (253)
T ss_dssp CCCCCEECTTCCTTSSCCCCEECCTTCSHHHHTTHHHHHHHHHHHHHTCSEEEEEEE
T ss_pred ccccccccccccccccccchhhccccccceeeeHHHHHHHHHHHHHcCCCEEEEEcC
Confidence 53321111 0256789999999999888875655444
No 235
>1yiz_A Kynurenine aminotransferase; glutamine transaminase; kynurenic acid, mosquito, PLP-enzyme, pyridoxal phosphate, PLP; HET: LLP; 1.55A {Aedes aegypti} SCOP: c.67.1.1 PDB: 1yiy_A* 2r5c_A* 2r5e_A*
Probab=47.21 E-value=1e+02 Score=29.46 Aligned_cols=51 Identities=22% Similarity=0.219 Sum_probs=32.5
Q ss_pred cEEEeccChHHHHHHHHHHHHcCCceEEEEecCCCCcchHHHHHHHHhCCCceEEEc
Q 045642 201 EVILTLGHSKFVKEFLCAAKEKKRSFEVFIADGAPKFEGHILAKELDKKGLKAIVIT 257 (406)
Q Consensus 201 ~~ILT~g~S~tV~~~L~~A~~~~~~f~ViV~EsrP~~eG~~~a~~L~~~GI~vt~I~ 257 (406)
.+++|.|.+..+..+++.+.+.| -+|++.+ |.+.|... .+...|+++..++
T Consensus 103 ~v~~~~g~~~a~~~~~~~~~~~g--d~Vl~~~--p~y~~~~~--~~~~~g~~~~~~~ 153 (429)
T 1yiz_A 103 EVLVTVGAYEALYATIQGHVDEG--DEVIIIE--PFFDCYEP--MVKAAGGIPRFIP 153 (429)
T ss_dssp SEEEESHHHHHHHHHHHHHCCTT--CEEEEEE--SCCTTHHH--HHHHTTCEEEEEE
T ss_pred CEEEecChHHHHHHHHHHhcCCC--CEEEEcC--CCchhHHH--HHHHcCCEEEEEe
Confidence 67888887777777777665333 3566654 66666432 2345788777664
No 236
>3i5t_A Aminotransferase; pyridoxal 5'-phosphate, PSI-2, NYSGXRC, ST genomics, protein structure initiative; HET: PLP; 2.00A {Rhodobacter sphaeroides 2}
Probab=47.09 E-value=74 Score=31.56 Aligned_cols=140 Identities=17% Similarity=0.240 Sum_probs=73.6
Q ss_pred HHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHhcc--cCcEEEeccChHHHHHHHHHHHHc------CCceEEEEe
Q 045642 165 KKLKSELIKAVNELIE-----DINTCREGIAEQAMELIH--QNEVILTLGHSKFVKEFLCAAKEK------KRSFEVFIA 231 (406)
Q Consensus 165 ~~~k~~l~~~i~~~~~-----e~~~~~~~I~~~a~~~I~--~g~~ILT~g~S~tV~~~L~~A~~~------~~~f~ViV~ 231 (406)
+++++.+.+.++.+.. -.......+++.-+++.. -..+++|-|.|..++..|+.|.+- ..+-+|++.
T Consensus 73 p~v~~A~~~~l~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~~~v~~~~sGseA~~~Aik~a~~~~~~~g~~~~~~vi~~ 152 (476)
T 3i5t_A 73 REIVDAMAHQAMVLPYASPWYMATSPAARLAEKIATLTPGDLNRIFFTTGGSTAVDSALRFSEFYNNVLGRPQKKRIIVR 152 (476)
T ss_dssp HHHHHHHHHHHHHCCCCCTTTCBCHHHHHHHHHHHTTSSTTCCEEEEESSHHHHHHHHHHHHHHHHHHTTCTTCCEEEEE
T ss_pred HHHHHHHHHHHHhccCcccCccCCHHHHHHHHHHHhcCCCCcCEEEEeCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEE
Confidence 5566666666655220 011223445555555553 235778888888899888888642 224466665
Q ss_pred cCCCCcchHHH-HHHHHhC----------CCceEEEc--------c-----------hHHHHHhhc---CCEEEEcceeE
Q 045642 232 DGAPKFEGHIL-AKELDKK----------GLKAIVIT--------D-----------SAVFAMISR---VNMVIVGVHAV 278 (406)
Q Consensus 232 EsrP~~eG~~~-a~~L~~~----------GI~vt~I~--------D-----------sav~~~m~~---vd~VllGAdav 278 (406)
+ |.+.|..+ +..+... .-.+..++ + ..+-..+.+ -+...+=.+.+
T Consensus 153 ~--~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~aavi~ep~ 230 (476)
T 3i5t_A 153 Y--DGYHGSTALTAACTGRTGNWPNFDIAQDRISFLSSPNPRHAGNRSQEAFLDDLVQEFEDRIESLGPDTIAAFLAEPI 230 (476)
T ss_dssp T--TCCCCSSHHHHHTCCCGGGCTTSCCCCTTEEEECCCCGGGCTTSCHHHHHHHHHHHHHHHHHHHCGGGEEEEEECSS
T ss_pred c--CCcCcCChhhccccCChhhccccCCCCCCcEEeCCCcccccCCCchHHHHHHHHHHHHHHHHhcCCCCEEEEEECCc
Confidence 4 33444322 2222110 11234443 1 233334432 12333334567
Q ss_pred eeCCCc-ccccchH-HHHHHHhhCCCceEE
Q 045642 279 MANGGV-IAPAGLH-VLALAAKKHDVPFVV 306 (406)
Q Consensus 279 ~~nG~v-vnk~GT~-~lAl~Ak~~~vPv~V 306 (406)
..+||+ +-.-+-+ .++-+|++|++.+++
T Consensus 231 ~~~~G~~~~~~~~L~~l~~lc~~~gillI~ 260 (476)
T 3i5t_A 231 LASGGVIIPPAGYHARFKAICEKHDILYIS 260 (476)
T ss_dssp BTTTTSBCCCTTHHHHHHHHHHHTTCEEEE
T ss_pred cCCCCcccCCHHHHHHHHHHHHHcCCEEEE
Confidence 777775 4455533 467789999998876
No 237
>2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae}
Probab=47.09 E-value=73 Score=32.35 Aligned_cols=112 Identities=16% Similarity=0.202 Sum_probs=68.5
Q ss_pred cccCcEEEeccChHHHHHHHHHH-HHcCCceEEEEecCCC-Ccch-HHHHHHHHhCCCceEEE-cc----hHHHHHhhc-
Q 045642 197 IHQNEVILTLGHSKFVKEFLCAA-KEKKRSFEVFIADGAP-KFEG-HILAKELDKKGLKAIVI-TD----SAVFAMISR- 267 (406)
Q Consensus 197 I~~g~~ILT~g~S~tV~~~L~~A-~~~~~~f~ViV~EsrP-~~eG-~~~a~~L~~~GI~vt~I-~D----sav~~~m~~- 267 (406)
+..+.+||+.|.++.+=..+.+. .++|.. +|+++.-++ ..++ ..+.++|.+.|.+++++ .| .++..++..
T Consensus 256 ~~~~~~vLITGgtGgIG~~lA~~La~~G~~-~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~~ 334 (511)
T 2z5l_A 256 WQPSGTVLITGGMGAIGRRLARRLAAEGAE-RLVLTSRRGPEAPGAAELAEELRGHGCEVVHAACDVAERDALAALVTAY 334 (511)
T ss_dssp CCCCSEEEEETTTSHHHHHHHHHHHHTTCS-EEEEEESSGGGSTTHHHHHHHHHTTTCEEEEEECCSSCHHHHHHHHHHS
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHhCCCc-EEEEEecCCcccHHHHHHHHHHHhcCCEEEEEEeCCCCHHHHHHHHhcC
Confidence 45667888888888776665443 333432 455543332 2233 56778898889888776 33 355666665
Q ss_pred -CCEEEEcceeEeeCCCc-------------ccccchHHHHHHHhhC-CCceEEecCC
Q 045642 268 -VNMVIVGVHAVMANGGV-------------IAPAGLHVLALAAKKH-DVPFVVVAST 310 (406)
Q Consensus 268 -vd~VllGAdav~~nG~v-------------vnk~GT~~lAl~Ak~~-~vPv~V~aes 310 (406)
+|.||-.|- +..+|.+ .|-.|+..+.-+++.. +...+|+..|
T Consensus 335 ~ld~VVh~AG-v~~~~~~~~~~~~~~~~~~~~nv~g~~~L~~~~~~~~~~~~~V~~SS 391 (511)
T 2z5l_A 335 PPNAVFHTAG-ILDDAVIDTLSPESFETVRGAKVCGAELLHQLTADIKGLDAFVLFSS 391 (511)
T ss_dssp CCSEEEECCC-CCCCBCGGGCCHHHHHHHHHHHHHHHHHHHHHTSSCTTCCCEEEEEE
T ss_pred CCcEEEECCc-ccCCcccccCCHHHHHHHHHHHHHHHHHHHHHHhhccCCCEEEEEeC
Confidence 888777653 3334332 2456777777777766 6667776554
No 238
>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}
Probab=47.01 E-value=93 Score=27.98 Aligned_cols=101 Identities=19% Similarity=0.250 Sum_probs=62.0
Q ss_pred ccCcEEEeccChHHHHHHHHHHHHcCCceEEEEecCCCCcchHHHHHHHHhCCCceEEE-cc----hHHHHHhh------
Q 045642 198 HQNEVILTLGHSKFVKEFLCAAKEKKRSFEVFIADGAPKFEGHILAKELDKKGLKAIVI-TD----SAVFAMIS------ 266 (406)
Q Consensus 198 ~~g~~ILT~g~S~tV~~~L~~A~~~~~~f~ViV~EsrP~~eG~~~a~~L~~~GI~vt~I-~D----sav~~~m~------ 266 (406)
.++.+||+.|.++.+=..+..... .+..+|+++..+.......+.+.+.+.|-++.++ .| ..+..++.
T Consensus 24 ~~~k~vlITGas~gIG~a~a~~l~-~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 102 (272)
T 4e3z_A 24 SDTPVVLVTGGSRGIGAAVCRLAA-RQGWRVGVNYAANREAADAVVAAITESGGEAVAIPGDVGNAADIAAMFSAVDRQF 102 (272)
T ss_dssp CCSCEEEETTTTSHHHHHHHHHHH-HTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred cCCCEEEEECCCchHHHHHHHHHH-HCCCEEEEEcCCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhC
Confidence 356788888988877666654431 2346788876666555567778888888777665 33 23444443
Q ss_pred -cCCEEEEcceeEeeCCC-------------cccccchHHHHHHHhh
Q 045642 267 -RVNMVIVGVHAVMANGG-------------VIAPAGLHVLALAAKK 299 (406)
Q Consensus 267 -~vd~VllGAdav~~nG~-------------vvnk~GT~~lAl~Ak~ 299 (406)
++|.||-.|-.....+. -+|-.|++.++.++..
T Consensus 103 g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~ 149 (272)
T 4e3z_A 103 GRLDGLVNNAGIVDYPQRVDEMSVERIERMLRVNVTGSILCAAEAVR 149 (272)
T ss_dssp SCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred CCCCEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHH
Confidence 57888876643222121 1466788777655543
No 239
>3la8_A SMU.1229, putative purine nucleoside phosphorylase; PUNA, glycosyltransferase, transferase; 1.80A {Streptococcus mutans} PDB: 3lba_A*
Probab=46.93 E-value=62 Score=30.84 Aligned_cols=70 Identities=13% Similarity=0.162 Sum_probs=45.0
Q ss_pred ChHHHHHHHHHHHH-cCCce--EEEEecCCCCcchHHHHHHHHhCCCceEEEcchHHHHHhhcCCEEEEcceeEeeCCCc
Q 045642 208 HSKFVKEFLCAAKE-KKRSF--EVFIADGAPKFEGHILAKELDKKGLKAIVITDSAVFAMISRVNMVIVGVHAVMANGGV 284 (406)
Q Consensus 208 ~S~tV~~~L~~A~~-~~~~f--~ViV~EsrP~~eG~~~a~~L~~~GI~vt~I~Dsav~~~m~~vd~VllGAdav~~nG~v 284 (406)
++..+.+.+..+++ .+.++ -||++-+.|.++-..=.+.|+. +|||+|=-
T Consensus 192 yd~~Lr~~a~~aA~~~gi~~~~Gvy~~~~GP~FeT~AE~r~~r~------------------------~GadaVgM---- 243 (303)
T 3la8_A 192 YTADYREVAHQVADKIGIKLDEGVYIGVSGPSYETPAEIRAFKT------------------------LGADAVGM---- 243 (303)
T ss_dssp SCHHHHHHHHHHHHHHTCCCEEEEEEECCCSSCCCHHHHHHHHH------------------------TTCSEEES----
T ss_pred cCHHHHHHHHHHHHHcCCceEEEEEEEeeCCccCCHHHHHHHHH------------------------cCCCEEec----
Confidence 34556666665543 34333 4777788888876432233332 26666643
Q ss_pred ccccchHHHHHHHhhCCCceEEecC
Q 045642 285 IAPAGLHVLALAAKKHDVPFVVVAS 309 (406)
Q Consensus 285 vnk~GT~~lAl~Ak~~~vPv~V~ae 309 (406)
=|.+.|.+|+++++||.+++-
T Consensus 244 ----st~pEa~vAre~gi~~~~Is~ 264 (303)
T 3la8_A 244 ----STVPEVIVAVHSGLKVLGISA 264 (303)
T ss_dssp ----SSHHHHHHHHHTTCEEEEEEE
T ss_pred ----cHHHHHHHHHHcCCCEEEEEE
Confidence 368899999999999999874
No 240
>3nnk_A Ureidoglycine-glyoxylate aminotransferase; PLP-dependent; HET: LLP; 2.58A {Klebsiella pneumoniae}
Probab=46.89 E-value=1.5e+02 Score=27.78 Aligned_cols=97 Identities=13% Similarity=0.118 Sum_probs=55.2
Q ss_pred EEEeccChHHHHHHHHHHHHcCCceEEEEecCCCCcchHHHHHHHHhCCCceEEEc-------c-hHHHHHhh--cCCEE
Q 045642 202 VILTLGHSKFVKEFLCAAKEKKRSFEVFIADGAPKFEGHILAKELDKKGLKAIVIT-------D-SAVFAMIS--RVNMV 271 (406)
Q Consensus 202 ~ILT~g~S~tV~~~L~~A~~~~~~f~ViV~EsrP~~eG~~~a~~L~~~GI~vt~I~-------D-sav~~~m~--~vd~V 271 (406)
+++|-|.+..+..++..+.+ ..-+|++.+ |.+-|..+...+...|+++..++ | ..+-..+. ++..|
T Consensus 67 v~~~~sgt~al~~~~~~~~~--~gd~Vl~~~--~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~v 142 (411)
T 3nnk_A 67 MLVDGTSRAGIEAILVSAIR--PGDKVLVPV--FGRFGHLLCEIARRCRAEVHTIEVPWGEVFTPDQVEDAVKRIRPRLL 142 (411)
T ss_dssp EEEESCHHHHHHHHHHHHCC--TTCEEEEEE--CSHHHHHHHHHHHHTTCEEEEEECCTTCCCCHHHHHHHHHHHCCSEE
T ss_pred EEECCCcHHHHHHHHHHhcC--CCCEEEEec--CCchHHHHHHHHHHcCCeEEEEecCCCCCCCHHHHHHHHhhCCCeEE
Confidence 34444445566666666643 334566654 55656556667777898888775 2 23334443 56566
Q ss_pred EEcceeEeeCCCcccccchHHHHHHHhhCCCceEE
Q 045642 272 IVGVHAVMANGGVIAPAGLHVLALAAKKHDVPFVV 306 (406)
Q Consensus 272 llGAdav~~nG~vvnk~GT~~lAl~Ak~~~vPv~V 306 (406)
++-. .=-..|.+ ... -.++-+|++|++++++
T Consensus 143 ~~~~-~~nptG~~-~~l--~~i~~l~~~~~~~li~ 173 (411)
T 3nnk_A 143 LTVQ-GDTSTTML-QPL--AELGEICRRYDALFYT 173 (411)
T ss_dssp EEES-EETTTTEE-CCC--TTHHHHHHHHTCEEEE
T ss_pred EEeC-CCCCccee-ccH--HHHHHHHHHcCCEEEE
Confidence 5532 22223333 332 2577788999988876
No 241
>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti}
Probab=46.79 E-value=63 Score=30.45 Aligned_cols=108 Identities=16% Similarity=0.135 Sum_probs=62.7
Q ss_pred cCcEEEeccChHHHHHHHHHHHHcCCceEEEEecCCCC----cchHHHHHHHHhCCCceEEEc-c----hHHHHHhh---
Q 045642 199 QNEVILTLGHSKFVKEFLCAAKEKKRSFEVFIADGAPK----FEGHILAKELDKKGLKAIVIT-D----SAVFAMIS--- 266 (406)
Q Consensus 199 ~g~~ILT~g~S~tV~~~L~~A~~~~~~f~ViV~EsrP~----~eG~~~a~~L~~~GI~vt~I~-D----sav~~~m~--- 266 (406)
.+.+||+.|.|+-+=..+..+.. .+..+|+++.-.+. .....++..+...|..+..+. | .++..++.
T Consensus 4 ~~k~vlVTGas~GIG~aia~~L~-~~G~~V~~~~r~~~~r~~~~~~~l~~~~~~~~~~~~~~~~Dvtd~~~v~~~~~~~~ 82 (324)
T 3u9l_A 4 SKKIILITGASSGFGRLTAEALA-GAGHRVYASMRDIVGRNASNVEAIAGFARDNDVDLRTLELDVQSQVSVDRAIDQII 82 (324)
T ss_dssp -CCEEEESSCSSHHHHHHHHHHH-HTTCEEEEEESCTTTTTHHHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHH-HCCCEEEEecCcccccCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHH
Confidence 35688888888877766655442 23467777543322 222455666666777776653 3 34444444
Q ss_pred ----cCCEEEEcceeEeeCCC-------------cccccchHHHHHHH----hhCCCceEEec
Q 045642 267 ----RVNMVIVGVHAVMANGG-------------VIAPAGLHVLALAA----KKHDVPFVVVA 308 (406)
Q Consensus 267 ----~vd~VllGAdav~~nG~-------------vvnk~GT~~lAl~A----k~~~vPv~V~a 308 (406)
++|.||-.|- +...|. -+|-.|+..++-++ +..+...+|..
T Consensus 83 ~~~g~iD~lVnnAG-~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~a~lp~m~~~~~g~iV~i 144 (324)
T 3u9l_A 83 GEDGRIDVLIHNAG-HMVFGPAEAFTPEQFAELYDINVLSTQRVNRAALPHMRRQKHGLLIWI 144 (324)
T ss_dssp HHHSCCSEEEECCC-CCBCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEE
T ss_pred HHcCCCCEEEECCC-cCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEE
Confidence 6888777663 233332 24778998888777 44455545443
No 242
>2x5d_A Probable aminotransferase; HET: LLP PLP; 2.25A {Pseudomonas aeruginosa}
Probab=46.73 E-value=80 Score=30.06 Aligned_cols=100 Identities=17% Similarity=0.205 Sum_probs=53.1
Q ss_pred CcEEEeccChHHHHHHHHHHHHcCCceEEEEecCCCCcchHHHHHHHHhCCCceEEEcch---H----HHHHh----hcC
Q 045642 200 NEVILTLGHSKFVKEFLCAAKEKKRSFEVFIADGAPKFEGHILAKELDKKGLKAIVITDS---A----VFAMI----SRV 268 (406)
Q Consensus 200 g~~ILT~g~S~tV~~~L~~A~~~~~~f~ViV~EsrP~~eG~~~a~~L~~~GI~vt~I~Ds---a----v~~~m----~~v 268 (406)
..+++|.|.+..+..++..+.+.| -+|++.+ |.+.|...+ +...|.++..++-. . +..+- +++
T Consensus 100 ~~v~~t~g~~~a~~~~~~~~~~~g--d~Vl~~~--p~~~~~~~~--~~~~g~~~~~~~~~~~~~~~~d~~~l~~~i~~~~ 173 (412)
T 2x5d_A 100 SEAIVTIGSKEGLAHLMLATLDHG--DTILVPN--PSYPIHIYG--AVIAGAQVRSVPLVPGIDFFNELERAIRESIPKP 173 (412)
T ss_dssp TSEEEESCHHHHHHHHHHHHCCTT--CEEEEEE--SCCHHHHHH--HHHHTCEEEEEECSTTSCHHHHHHHHHHTEESCC
T ss_pred cCEEEcCChHHHHHHHHHHhCCCC--CEEEEcC--CCchhHHHH--HHHcCCEEEEeecCCccCCCCCHHHHHHhcccCc
Confidence 467888777777777776654333 3566553 667774332 33468877766421 1 11221 234
Q ss_pred CEEEEcceeEeeCCCcccccchHHHHHHHhhCCCceEE
Q 045642 269 NMVIVGVHAVMANGGVIAPAGLHVLALAAKKHDVPFVV 306 (406)
Q Consensus 269 d~VllGAdav~~nG~vvnk~GT~~lAl~Ak~~~vPv~V 306 (406)
..|++ +..--+.|.++..---..++-.|+.+++++++
T Consensus 174 ~~v~l-~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~ 210 (412)
T 2x5d_A 174 RMMIL-GFPSNPTAQCVELDFFERVVALAKQYDVMVVH 210 (412)
T ss_dssp SEEEE-ESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEE
T ss_pred eEEEE-CCCCCCCCCcCCHHHHHHHHHHHHHcCCEEEE
Confidence 45554 22111123332221124577788899998876
No 243
>2o1b_A Aminotransferase, class I; aminotrasferase; HET: PLP; 1.95A {Staphylococcus aureus}
Probab=46.71 E-value=1e+02 Score=29.40 Aligned_cols=100 Identities=12% Similarity=0.093 Sum_probs=52.6
Q ss_pred CcEEEeccChHHHHHHHHHHHHcCCceEEEEecCCCCcchHHHHHHHHhCCCceEEEcch---------HHHHHh-hcCC
Q 045642 200 NEVILTLGHSKFVKEFLCAAKEKKRSFEVFIADGAPKFEGHILAKELDKKGLKAIVITDS---------AVFAMI-SRVN 269 (406)
Q Consensus 200 g~~ILT~g~S~tV~~~L~~A~~~~~~f~ViV~EsrP~~eG~~~a~~L~~~GI~vt~I~Ds---------av~~~m-~~vd 269 (406)
..+++|.|.+..+..++....+.| -+|++. .|.+.|...+ +...|.++..++-. .+-..+ +++.
T Consensus 110 ~~v~~t~G~~~al~~~~~~l~~~g--d~Vl~~--~p~y~~~~~~--~~~~g~~~~~v~~~~~~~~~d~~~l~~~l~~~~~ 183 (404)
T 2o1b_A 110 DEVCILYGTKNGLVAVPTCVINPG--DYVLLP--DPGYTDYLAG--VLLADGKPVPLNLEPPHYLPDWSKVDSQIIDKTK 183 (404)
T ss_dssp TSEEEESSHHHHHHHHHHHHCCTT--CEEEEE--ESCCSSHHHH--HHHTTCEEEEEECCTTTCCCCGGGSCHHHHHHEE
T ss_pred ccEEEcCCcHHHHHHHHHHhcCCC--CEEEEc--CCCchhHHHH--HHHCCCEEEEeccCcccCcCCHHHHHHhhccCce
Confidence 467888777777777776654333 355554 4666664332 34568877766421 111111 3444
Q ss_pred EEEEcceeEeeCCCcccccchHHHHHHHhhCCCceEE
Q 045642 270 MVIVGVHAVMANGGVIAPAGLHVLALAAKKHDVPFVV 306 (406)
Q Consensus 270 ~VllGAdav~~nG~vvnk~GT~~lAl~Ak~~~vPv~V 306 (406)
.|++. ..-.+.|.+...-=-..++-.|+++++++++
T Consensus 184 ~v~l~-~p~nptG~~~~~~~l~~l~~~~~~~~~~li~ 219 (404)
T 2o1b_A 184 LIYLT-YPNNPTGSTATKEVFDEAIAKFKGTDTKIVH 219 (404)
T ss_dssp EEEEC-SSCTTTCCCCCHHHHHHHHHHHTTSSCEEEE
T ss_pred EEEEc-CCCCCCCccCCHHHHHHHHHHHHHcCCEEEE
Confidence 45442 2111123322211113467788999998776
No 244
>4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis}
Probab=46.70 E-value=24 Score=35.23 Aligned_cols=112 Identities=19% Similarity=0.111 Sum_probs=62.0
Q ss_pred ccCcEEEeccChHHHHHHHHHH-HHcCC-ceEEEEecCCCCcch-H-HHH--------------HHHHhCCCceEEEcc-
Q 045642 198 HQNEVILTLGHSKFVKEFLCAA-KEKKR-SFEVFIADGAPKFEG-H-ILA--------------KELDKKGLKAIVITD- 258 (406)
Q Consensus 198 ~~g~~ILT~g~S~tV~~~L~~A-~~~~~-~f~ViV~EsrP~~eG-~-~~a--------------~~L~~~GI~vt~I~D- 258 (406)
..+.+||+.|.++.+=..|... .+.+. ..+|+++.-++..+- . .+. ..+...++.+.. .|
T Consensus 71 ~~~~~VLVTGatG~IG~~l~~~Ll~~~~~g~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~~v~-~Dl 149 (478)
T 4dqv_A 71 PELRTVLLTGATGFLGRYLVLELLRRLDVDGRLICLVRAESDEDARRRLEKTFDSGDPELLRHFKELAADRLEVVA-GDK 149 (478)
T ss_dssp SCCCEEEEECTTSHHHHHHHHHHHHHSCTTCEEEEEECSSSHHHHHHHHHGGGCSSCHHHHHHHHHHHTTTEEEEE-CCT
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHhcCCCCCEEEEEECCCCcHHHHHHHHHHHHhcchhhhhhhhhhccCceEEEE-eEC
Confidence 3577899989877766655443 33322 478888876554321 1 111 111113443332 23
Q ss_pred ---------hHHHHHhhcCCEEEEcceeEeeC----CCcccccchHHHHHHHhhCCCceEEecCC
Q 045642 259 ---------SAVFAMISRVNMVIVGVHAVMAN----GGVIAPAGLHVLALAAKKHDVPFVVVAST 310 (406)
Q Consensus 259 ---------sav~~~m~~vd~VllGAdav~~n----G~vvnk~GT~~lAl~Ak~~~vPv~V~aes 310 (406)
..+..++.++|.||--|-.+-.+ .--+|-.||..++-+|+..++.-+|...+
T Consensus 150 ~~~~~gld~~~~~~~~~~~D~Vih~Aa~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~~~V~iSS 214 (478)
T 4dqv_A 150 SEPDLGLDQPMWRRLAETVDLIVDSAAMVNAFPYHELFGPNVAGTAELIRIALTTKLKPFTYVST 214 (478)
T ss_dssp TSGGGGCCHHHHHHHHHHCCEEEECCSSCSBSSCCEEHHHHHHHHHHHHHHHTSSSCCCEEEEEE
T ss_pred CCcccCCCHHHHHHHHcCCCEEEECccccCCcCHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEee
Confidence 24566777788777654322110 01146789999999999999744444433
No 245
>2zay_A Response regulator receiver protein; structural genomics, NYSGXRC, target 11006U, protein structure initiative; 2.00A {Desulfuromonas acetoxidans}
Probab=46.65 E-value=57 Score=25.71 Aligned_cols=80 Identities=10% Similarity=0.221 Sum_probs=48.8
Q ss_pred CCceEEEEecCCCCcchHHHHHHHHhCCCceEEEcchHHH-HHhh--cCCEEEEcceeEeeCCCcccccchHHHHHHHh-
Q 045642 223 KRSFEVFIADGAPKFEGHILAKELDKKGLKAIVITDSAVF-AMIS--RVNMVIVGVHAVMANGGVIAPAGLHVLALAAK- 298 (406)
Q Consensus 223 ~~~f~ViV~EsrP~~eG~~~a~~L~~~GI~vt~I~Dsav~-~~m~--~vd~VllGAdav~~nG~vvnk~GT~~lAl~Ak- 298 (406)
.+..+|++++..|.. ...+...|...|+.|....+..-+ ..+. ..|.||+..+. .+ .-|--.+..+-+
T Consensus 6 ~~~~~iLivd~~~~~-~~~l~~~L~~~g~~v~~~~~~~~a~~~l~~~~~dlii~d~~l--~~-----~~g~~~~~~l~~~ 77 (147)
T 2zay_A 6 GKWWRIMLVDTQLPA-LAASISALSQEGFDIIQCGNAIEAVPVAVKTHPHLIITEANM--PK-----ISGMDLFNSLKKN 77 (147)
T ss_dssp --CEEEEEECTTGGG-GHHHHHHHHHHTEEEEEESSHHHHHHHHHHHCCSEEEEESCC--SS-----SCHHHHHHHHHTS
T ss_pred CCCceEEEEeCCHHH-HHHHHHHHHHcCCeEEEeCCHHHHHHHHHcCCCCEEEEcCCC--CC-----CCHHHHHHHHHcC
Confidence 356789999888753 345666777789888876664332 2222 47888887543 21 234444444443
Q ss_pred --hCCCceEEecCC
Q 045642 299 --KHDVPFVVVAST 310 (406)
Q Consensus 299 --~~~vPv~V~aes 310 (406)
..++|+++++..
T Consensus 78 ~~~~~~pii~ls~~ 91 (147)
T 2zay_A 78 PQTASIPVIALSGR 91 (147)
T ss_dssp TTTTTSCEEEEESS
T ss_pred cccCCCCEEEEeCC
Confidence 457999998864
No 246
>1ka9_H Imidazole glycerol phosphtate synthase; riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; 2.30A {Thermus thermophilus} SCOP: c.23.16.1
Probab=46.59 E-value=53 Score=28.48 Aligned_cols=78 Identities=14% Similarity=0.201 Sum_probs=45.9
Q ss_pred EEEEecCCCCcchHHHHHHHHhCCCceEEEcchHHHHHhhcCCEEEEcceeEeeCCCcccc-------cchHHHHHHHhh
Q 045642 227 EVFIADGAPKFEGHILAKELDKKGLKAIVITDSAVFAMISRVNMVIVGVHAVMANGGVIAP-------AGLHVLALAAKK 299 (406)
Q Consensus 227 ~ViV~EsrP~~eG~~~a~~L~~~GI~vt~I~Dsav~~~m~~vd~VllGAdav~~nG~vvnk-------~GT~~lAl~Ak~ 299 (406)
+|.|++. +...-..+.+.|.+.|+.++++.+.. -+.++|.+|++- |+-... .+...+...|..
T Consensus 4 ~I~iid~-~~~~~~~~~~~l~~~G~~~~~~~~~~---~l~~~d~lil~G------~g~~~~~~~~l~~~~~~~~i~~~~~ 73 (200)
T 1ka9_H 4 KALLIDY-GSGNLRSAAKALEAAGFSVAVAQDPK---AHEEADLLVLPG------QGHFGQVMRAFQESGFVERVRRHLE 73 (200)
T ss_dssp EEEEECS-SCSCHHHHHHHHHHTTCEEEEESSTT---SCSSCSEEEECC------CSCHHHHHHTTSSSCTHHHHHHHHH
T ss_pred EEEEEeC-CCccHHHHHHHHHHCCCeEEEecChH---HcccCCEEEECC------CCcHHHHHHHHHhcCHHHHHHHHHH
Confidence 5666653 21111467889999999999987642 244667666632 122111 233344444456
Q ss_pred CCCceEEecCCcccc
Q 045642 300 HDVPFVVVASTHELC 314 (406)
Q Consensus 300 ~~vPv~V~aes~K~~ 314 (406)
.++|++-+|--+.+-
T Consensus 74 ~~~PilGIC~G~Qll 88 (200)
T 1ka9_H 74 RGLPFLGICVGMQVL 88 (200)
T ss_dssp TTCCEEECTHHHHTT
T ss_pred cCCeEEEEcHHHHHH
Confidence 799999988655543
No 247
>4e4t_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.55A {Burkholderia ambifaria} PDB: 3uvz_A
Probab=46.59 E-value=18 Score=35.78 Aligned_cols=77 Identities=18% Similarity=0.199 Sum_probs=50.7
Q ss_pred hcccCcEEEeccChHHHHHHHHHHHHcCCceEEEEecCCCCcchHHHHHHHHhCCCceEEEcchHHHHHhhcCCEEEEcc
Q 045642 196 LIHQNEVILTLGHSKFVKEFLCAAKEKKRSFEVFIADGAPKFEGHILAKELDKKGLKAIVITDSAVFAMISRVNMVIVGV 275 (406)
Q Consensus 196 ~I~~g~~ILT~g~S~tV~~~L~~A~~~~~~f~ViV~EsrP~~eG~~~a~~L~~~GI~vt~I~Dsav~~~m~~vd~VllGA 275 (406)
.+..|.+|+..|....-..+.+.|.+.| ++|++++..|...+..+| ..-+...+.--.++..+..++|.|+.+.
T Consensus 31 ~~~~~~~IlIlG~G~lg~~~~~aa~~lG--~~v~v~d~~~~~p~~~~a----d~~~~~~~~d~~~l~~~a~~~D~V~~~~ 104 (419)
T 4e4t_A 31 PILPGAWLGMVGGGQLGRMFCFAAQSMG--YRVAVLDPDPASPAGAVA----DRHLRAAYDDEAALAELAGLCEAVSTEF 104 (419)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHTT--CEEEEECSCTTCHHHHHS----SEEECCCTTCHHHHHHHHHHCSEEEECC
T ss_pred cCCCCCEEEEECCCHHHHHHHHHHHHCC--CEEEEECCCCcCchhhhC----CEEEECCcCCHHHHHHHHhcCCEEEEcc
Confidence 5778999999999888788888777654 678888877775544332 2111111111124555567899999887
Q ss_pred eeE
Q 045642 276 HAV 278 (406)
Q Consensus 276 dav 278 (406)
+.+
T Consensus 105 e~~ 107 (419)
T 4e4t_A 105 ENV 107 (419)
T ss_dssp TTC
T ss_pred CcC
Confidence 665
No 248
>1y8q_A Ubiquitin-like 1 activating enzyme E1A; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_A* 3kyc_A* 3kyd_A*
Probab=46.57 E-value=2e+02 Score=27.43 Aligned_cols=108 Identities=10% Similarity=0.038 Sum_probs=70.2
Q ss_pred HHHHHHHhcccCcEEEeccChHHHHHHHHHHHHcCCceEEEEecCCC------C--------cch----HHHHHHHHhC-
Q 045642 189 IAEQAMELIHQNEVILTLGHSKFVKEFLCAAKEKKRSFEVFIADGAP------K--------FEG----HILAKELDKK- 249 (406)
Q Consensus 189 I~~~a~~~I~~g~~ILT~g~S~tV~~~L~~A~~~~~~f~ViV~EsrP------~--------~eG----~~~a~~L~~~- 249 (406)
++..+.+.+. +..|+..|...+=..+++.....|.. ++.+++... . .-| ..+++.|.+.
T Consensus 26 ~G~~~q~~L~-~~~VlivG~GGlG~~ia~~La~~Gvg-~itlvD~d~V~~sNL~rq~~~~~~diG~~Ka~~~~~~l~~ln 103 (346)
T 1y8q_A 26 WGLEAQKRLR-ASRVLLVGLKGLGAEIAKNLILAGVK-GLTMLDHEQVTPEDPGAQFLIRTGSVGRNRAEASLERAQNLN 103 (346)
T ss_dssp HCHHHHHHHH-TCEEEEECCSHHHHHHHHHHHHHTCS-EEEEECCCBCCSSCGGGCTTSCSSCTTSBHHHHHHHHHHHTC
T ss_pred hCHHHHHHHh-CCeEEEECCCHHHHHHHHHHHHcCCC-EEEEEECCCcchhhCCCCCccccccCcCCHHHHHHHHHHhHC
Confidence 3455666665 46788889888777777777766753 444444322 1 113 4667788874
Q ss_pred -CCceEEEcchH---HHHHhhcCCEEEEcceeEeeCCCcccccchHHHHHHHhhCCCceEEe
Q 045642 250 -GLKAIVITDSA---VFAMISRVNMVIVGVHAVMANGGVIAPAGLHVLALAAKKHDVPFVVV 307 (406)
Q Consensus 250 -GI~vt~I~Dsa---v~~~m~~vd~VllGAdav~~nG~vvnk~GT~~lAl~Ak~~~vPv~V~ 307 (406)
+++++.+...- ...+++++|.||.+.|.. .--+.+.-+|+.+++|++.+
T Consensus 104 p~v~v~~~~~~~~~~~~~~~~~~dvVv~~~d~~---------~~r~~ln~~~~~~~ip~i~~ 156 (346)
T 1y8q_A 104 PMVDVKVDTEDIEKKPESFFTQFDAVCLTCCSR---------DVIVKVDQICHKNSIKFFTG 156 (346)
T ss_dssp TTSEEEEECSCGGGCCHHHHTTCSEEEEESCCH---------HHHHHHHHHHHHTTCEEEEE
T ss_pred CCeEEEEEecccCcchHHHhcCCCEEEEcCCCH---------HHHHHHHHHHHHcCCCEEEE
Confidence 57777765432 345678899999876642 22356777889999999875
No 249
>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}
Probab=46.55 E-value=40 Score=31.19 Aligned_cols=103 Identities=12% Similarity=0.083 Sum_probs=59.0
Q ss_pred cEEEeccChHHHHHHHHHH-HHcCCceEEEEecCCCCcchHHHHHHHHhCCCceEEE--cc-hHHHHHhhcCCEEEEcce
Q 045642 201 EVILTLGHSKFVKEFLCAA-KEKKRSFEVFIADGAPKFEGHILAKELDKKGLKAIVI--TD-SAVFAMISRVNMVIVGVH 276 (406)
Q Consensus 201 ~~ILT~g~S~tV~~~L~~A-~~~~~~f~ViV~EsrP~~eG~~~a~~L~~~GI~vt~I--~D-sav~~~m~~vd~VllGAd 276 (406)
.+||+.|.++.+=..|... .++| .+|+++.-.+... ..|...++.+... .| .++..+++++|.||--|-
T Consensus 14 M~ilVtGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~-----~~l~~~~~~~~~~Dl~d~~~~~~~~~~~d~vih~a~ 86 (342)
T 2x4g_A 14 VKYAVLGATGLLGHHAARAIRAAG--HDLVLIHRPSSQI-----QRLAYLEPECRVAEMLDHAGLERALRGLDGVIFSAG 86 (342)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTT--CEEEEEECTTSCG-----GGGGGGCCEEEECCTTCHHHHHHHTTTCSEEEEC--
T ss_pred CEEEEECCCcHHHHHHHHHHHHCC--CEEEEEecChHhh-----hhhccCCeEEEEecCCCHHHHHHHHcCCCEEEECCc
Confidence 4788889887776665444 3333 6788776555421 1233345544322 22 356677788888877553
Q ss_pred eEeeC-CC-----cccccchHHHHHHHhhCCCceEEecCC
Q 045642 277 AVMAN-GG-----VIAPAGLHVLALAAKKHDVPFVVVAST 310 (406)
Q Consensus 277 av~~n-G~-----vvnk~GT~~lAl~Ak~~~vPv~V~aes 310 (406)
..-.. .. -+|-.|+..+.-+|+.++++-+|...+
T Consensus 87 ~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~SS 126 (342)
T 2x4g_A 87 YYPSRPRRWQEEVASALGQTNPFYAACLQARVPRILYVGS 126 (342)
T ss_dssp ----------CHHHHHHHHHHHHHHHHHHHTCSCEEEECC
T ss_pred cCcCCCCCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEECC
Confidence 22100 00 145678999999999888765555444
No 250
>3cog_A Cystathionine gamma-lyase; CTH, PLP, propargylglycine, SGC, inhibitor, structural genom stockholm, structural genomics consortium; HET: PLP; 2.00A {Homo sapiens} PDB: 2nmp_A* 3elp_B
Probab=46.54 E-value=69 Score=30.98 Aligned_cols=98 Identities=15% Similarity=0.075 Sum_probs=51.2
Q ss_pred cEEEeccChHHHHHHHHHHHHcCCceEEEEecCCCCcchH-H-HHHHHHhCCCceEEEcch---HHHHHhhcCCEEEEcc
Q 045642 201 EVILTLGHSKFVKEFLCAAKEKKRSFEVFIADGAPKFEGH-I-LAKELDKKGLKAIVITDS---AVFAMISRVNMVIVGV 275 (406)
Q Consensus 201 ~~ILT~g~S~tV~~~L~~A~~~~~~f~ViV~EsrP~~eG~-~-~a~~L~~~GI~vt~I~Ds---av~~~m~~vd~VllGA 275 (406)
+.|++.+.+..+..++. ..+.| -+|++.+ |.+.|. . +...+...|++++.++-. .+...+..-+++|+-.
T Consensus 84 ~~i~~~sG~~ai~~~~~-l~~~g--d~Vl~~~--~~y~~~~~~~~~~~~~~G~~v~~v~~~d~~~l~~~i~~~t~~v~~~ 158 (403)
T 3cog_A 84 YCLAFASGLAATVTITH-LLKAG--DQIICMD--DVYGGTNRYFRQVASEFGLKISFVDCSKIKLLEAAITPETKLVWIE 158 (403)
T ss_dssp EEEEESCHHHHHHHHHT-TSCTT--CEEEEES--SCCHHHHHHHHHTGGGGTCEEEEECTTSHHHHHHHCCTTEEEEEEE
T ss_pred cEEEECCHHHHHHHHHH-HhCCC--CEEEEeC--CCcchHHHHHHHHHHHcCCEEEEECCCCHHHHHHhcCcCCeEEEEE
Confidence 55665555555555555 43233 3566654 777763 3 223346789999999732 2333333222333211
Q ss_pred eeEeeCCCcccccchHHHHHHHhhCC-CceEE
Q 045642 276 HAVMANGGVIAPAGLHVLALAAKKHD-VPFVV 306 (406)
Q Consensus 276 dav~~nG~vvnk~GT~~lAl~Ak~~~-vPv~V 306 (406)
.---..|.+.. -..++-+|+.++ ++++|
T Consensus 159 ~p~nptG~~~~---l~~i~~la~~~g~~~liv 187 (403)
T 3cog_A 159 TPTNPTQKVID---IEGCAHIVHKHGDIILVV 187 (403)
T ss_dssp SSCTTTCCCCC---HHHHHHHHTSSSCCEEEE
T ss_pred CCCCCCCeeeC---HHHHHHHHHHcCCCEEEE
Confidence 11112233332 346777889999 77765
No 251
>2a9v_A GMP synthase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, ligase; 2.24A {Thermoplasma acidophilum} SCOP: c.23.16.1
Probab=46.51 E-value=26 Score=31.16 Aligned_cols=84 Identities=10% Similarity=0.164 Sum_probs=48.8
Q ss_pred ceEEEEecCCCCcchHHHHHHHHhCCCceEEEcchHHHHHhhcCCEEEEcceeEeeCCCcccccchHHHHHHHhhCCCce
Q 045642 225 SFEVFIADGAPKFEGHILAKELDKKGLKAIVITDSAVFAMISRVNMVIVGVHAVMANGGVIAPAGLHVLALAAKKHDVPF 304 (406)
Q Consensus 225 ~f~ViV~EsrP~~eG~~~a~~L~~~GI~vt~I~Dsav~~~m~~vd~VllGAdav~~nG~vvnk~GT~~lAl~Ak~~~vPv 304 (406)
..+|.+.+....+ -..+++.|.+.|+.+.+++...-..-+.++|.+|+.--. .|++........+.-.+...++|+
T Consensus 13 ~~~i~~id~~~~~-~~~~~~~l~~~G~~~~vv~~~~~~~~l~~~DglIl~GG~---p~~~~~~~~~~~l~~~~~~~~~Pi 88 (212)
T 2a9v_A 13 MLKIYVVDNGGQW-THREWRVLRELGVDTKIVPNDIDSSELDGLDGLVLSGGA---PNIDEELDKLGSVGKYIDDHNYPI 88 (212)
T ss_dssp CCBEEEEEESCCT-TCHHHHHHHHTTCBCCEEETTSCGGGGTTCSEEEEEEEC---SCGGGTGGGHHHHHHHHHHCCSCE
T ss_pred cceEEEEeCCCcc-HHHHHHHHHHCCCEEEEEeCCCCHHHHhCCCEEEECCCC---CCCCcccccchhHHHHHHhCCCCE
Confidence 3567777766555 346788888999988888753211223457877773210 223333212222333445789999
Q ss_pred EEecCCcc
Q 045642 305 VVVASTHE 312 (406)
Q Consensus 305 ~V~aes~K 312 (406)
+-+|--+-
T Consensus 89 LGIC~G~Q 96 (212)
T 2a9v_A 89 LGICVGAQ 96 (212)
T ss_dssp EEETHHHH
T ss_pred EEEChHHH
Confidence 99885433
No 252
>4a6r_A Omega transaminase; transferase, PLP-binding enzyme, transaminase fold type I; HET: TA8; 1.35A {Chromobacterium violaceum} PDB: 4a6t_A* 4a6u_A 4a72_A* 4ah3_A*
Probab=46.30 E-value=1.8e+02 Score=28.18 Aligned_cols=140 Identities=16% Similarity=0.119 Sum_probs=71.8
Q ss_pred HHHHHHHHHHHHHHH------HHHHHHHHHHHHHHHHhcc--cCcEEEeccChHHHHHHHHHHHHc------CCceEEEE
Q 045642 165 KKLKSELIKAVNELI------EDINTCREGIAEQAMELIH--QNEVILTLGHSKFVKEFLCAAKEK------KRSFEVFI 230 (406)
Q Consensus 165 ~~~k~~l~~~i~~~~------~e~~~~~~~I~~~a~~~I~--~g~~ILT~g~S~tV~~~L~~A~~~------~~~f~ViV 230 (406)
+++++.+.+.++.+. .-.......+++.-+++.. ...+++|.|.+..+...|+.+.+- ..+-+|++
T Consensus 69 p~v~~A~~~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~~~v~~~~ggseA~~~al~~~~~~~~~~g~~~~~~vi~ 148 (459)
T 4a6r_A 69 KDFAEAARRQMEELPFYNTFFKTTHPAVVELSSLLAEVTPAGFDRVFYTNSGSESVDTMIRMVRRYWDVQGKPEKKTLIG 148 (459)
T ss_dssp HHHHHHHHHHHHHCSCCCTTSSSCCHHHHHHHHHHHHHSCTTCCEEEEESSHHHHHHHHHHHHHHHHHHTTCTTCCEEEE
T ss_pred HHHHHHHHHHHHhccccccccccCCHHHHHHHHHHHHhCCCCCCEEEEeCchHHHHHHHHHHHHHHHHhcCCCCCCEEEE
Confidence 556666666665432 0011222334444444442 345788888888888888887741 12335555
Q ss_pred ecCCCCcchH-HHHHHHHhC----------CCceEEEc-----------c---------hHHHHHhhc---CCEEEEcce
Q 045642 231 ADGAPKFEGH-ILAKELDKK----------GLKAIVIT-----------D---------SAVFAMISR---VNMVIVGVH 276 (406)
Q Consensus 231 ~EsrP~~eG~-~~a~~L~~~----------GI~vt~I~-----------D---------sav~~~m~~---vd~VllGAd 276 (406)
.+ |.+.|. ..+..+... .-.+..++ | ..+-..+.+ -+..++=++
T Consensus 149 ~~--~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~d~~~~~~~~~~~le~~i~~~~~~~~~~vi~e 226 (459)
T 4a6r_A 149 RW--NGYHGSTIGGASLGGMKYMHEQGDLPIPGMAHIEQPWWYKHGKDMTPDEFGVVAARWLEEKILEIGADKVAAFVGE 226 (459)
T ss_dssp ET--TCCCCSSHHHHHHSCCTTTC---CCSCSSEEEECCCCHHHHCTTCCHHHHHHHHHHHHHHHHHHHCGGGEEEEEEC
T ss_pred EC--CCcCCccHHHHhhcCChhhccccCCCCCCCEEeCCCccccCCcccCHHHHHHHHHHHHHHHHHHcCCCCEEEEEEC
Confidence 54 334443 222232211 11344444 1 223333332 123333445
Q ss_pred eEeeCCCccc-ccch-HHHHHHHhhCCCceEE
Q 045642 277 AVMANGGVIA-PAGL-HVLALAAKKHDVPFVV 306 (406)
Q Consensus 277 av~~nG~vvn-k~GT-~~lAl~Ak~~~vPv~V 306 (406)
.+..+||.+. .-+- -.++-+|++|++.+++
T Consensus 227 p~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~ 258 (459)
T 4a6r_A 227 PIQGAGGVIVPPATYWPEIERICRKYDVLLVA 258 (459)
T ss_dssp SSBTTTTCBCCCTTHHHHHHHHHHHTTCEEEE
T ss_pred CccCCCCcccCCHHHHHHHHHHHHHcCCEEEE
Confidence 5777777765 3343 3466789999997775
No 253
>3nx3_A Acoat, acetylornithine aminotransferase; csgid, structural genomics, center for structural genomics O infectious diseases; 1.80A {Campylobacter jejuni subsp}
Probab=46.26 E-value=1.7e+02 Score=27.43 Aligned_cols=139 Identities=13% Similarity=0.161 Sum_probs=69.6
Q ss_pred HHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHhcccCcEEEeccChHHHHHHHHHHHHc-----CCceEEEEecCCC
Q 045642 165 KKLKSELIKAVNELIE----DINTCREGIAEQAMELIHQNEVILTLGHSKFVKEFLCAAKEK-----KRSFEVFIADGAP 235 (406)
Q Consensus 165 ~~~k~~l~~~i~~~~~----e~~~~~~~I~~~a~~~I~~g~~ILT~g~S~tV~~~L~~A~~~-----~~~f~ViV~EsrP 235 (406)
+++++.+.+.++.+.. -.....+.+.+..+++.....+++|-|.+..+...|+.+... ..+-+|++.+ |
T Consensus 55 p~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~v~~~~gg~ea~~~al~~~~~~~~~~g~~~~~vi~~~--~ 132 (395)
T 3nx3_A 55 AKFNAKIKAQVDKLLHTSNLYYNENIAAAAKNLAKASALERVFFTNSGTESIEGAMKTARKYAFNKGVKGGQFIAFK--H 132 (395)
T ss_dssp HHHHHHHHHHHTTCSCCCTTSBCHHHHHHHHHHHHHHTCSEEEEESSHHHHHHHHHHHHHHHHHHTTCTTCEEEEET--T
T ss_pred HHHHHHHHHHHHhccccccccCCHHHHHHHHHHHHhcCCCeEEEeCCHHHHHHHHHHHHHHHhhccCCCCCEEEEEc--C
Confidence 4556666665544210 001122233333334444456788888888888887766532 1234566654 3
Q ss_pred CcchHH-HHHH----------HHhCCCceEEEc--ch-HHHHHhhcCCEEEEcceeEeeCCCcccc-cc-hHHHHHHHhh
Q 045642 236 KFEGHI-LAKE----------LDKKGLKAIVIT--DS-AVFAMISRVNMVIVGVHAVMANGGVIAP-AG-LHVLALAAKK 299 (406)
Q Consensus 236 ~~eG~~-~a~~----------L~~~GI~vt~I~--Ds-av~~~m~~vd~VllGAdav~~nG~vvnk-~G-T~~lAl~Ak~ 299 (406)
.+.|.. .+.. +...+.++..++ |- ++-..+.. +..++-.+.+..+||.+.. -+ -..++-+|++
T Consensus 133 ~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~-~~~~v~~~~~~~~~G~~~~~~~~l~~l~~l~~~ 211 (395)
T 3nx3_A 133 SFHGRTLGALSLTANEKYQKPFKPLISGVKFAKYNDISSVEKLVNE-KTCAIILESVQGEGGINPANKDFYKALRKLCDE 211 (395)
T ss_dssp CCCCSSHHHHTTCCCHHHHGGGCSCCSCEEEECTTCHHHHHTTCCT-TEEEEEEESEECTTSCEECCHHHHHHHHHHHHH
T ss_pred CcCCCCHHHHhhcCCcccccccCCCCCCcEEeCCCCHHHHHHhccC-CeEEEEEeCccCCCCcccCCHHHHHHHHHHHHH
Confidence 333321 1111 112334566665 41 22222322 2233334557777666643 33 2446778999
Q ss_pred CCCceEE
Q 045642 300 HDVPFVV 306 (406)
Q Consensus 300 ~~vPv~V 306 (406)
|++++++
T Consensus 212 ~~~~li~ 218 (395)
T 3nx3_A 212 KDILLIA 218 (395)
T ss_dssp HTCEEEE
T ss_pred cCCEEEE
Confidence 9998885
No 254
>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*
Probab=46.25 E-value=29 Score=31.41 Aligned_cols=107 Identities=21% Similarity=0.239 Sum_probs=66.2
Q ss_pred cCcEEEeccChHHHHHHHHHHHHcCCceEEEEecCCCCcchHHHHHHHHhCCCceEEE-cc----hHHHHHhh-------
Q 045642 199 QNEVILTLGHSKFVKEFLCAAKEKKRSFEVFIADGAPKFEGHILAKELDKKGLKAIVI-TD----SAVFAMIS------- 266 (406)
Q Consensus 199 ~g~~ILT~g~S~tV~~~L~~A~~~~~~f~ViV~EsrP~~eG~~~a~~L~~~GI~vt~I-~D----sav~~~m~------- 266 (406)
.|.++|+.|.|+-+=..+..... .+..+|+++..|.......+++++.+.|..+.++ .| .++..++.
T Consensus 3 ~~k~vlVTGas~gIG~aia~~l~-~~G~~vv~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 81 (258)
T 3oid_A 3 QNKCALVTGSSRGVGKAAAIRLA-ENGYNIVINYARSKKAALETAEEIEKLGVKVLVVKANVGQPAKIKEMFQQIDETFG 81 (258)
T ss_dssp CCCEEEESSCSSHHHHHHHHHHH-HTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEecCCchHHHHHHHHHH-HCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 56788888888877766655442 2346788876666555667888888888877765 33 23344443
Q ss_pred cCCEEEEcceeEeeCCC-------------cccccchHHHHHHH----hhCCCceEEe
Q 045642 267 RVNMVIVGVHAVMANGG-------------VIAPAGLHVLALAA----KKHDVPFVVV 307 (406)
Q Consensus 267 ~vd~VllGAdav~~nG~-------------vvnk~GT~~lAl~A----k~~~vPv~V~ 307 (406)
++|.+|-.|- +...+. -+|-.|++.++.++ +..+...+|.
T Consensus 82 ~id~lv~nAg-~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~ 138 (258)
T 3oid_A 82 RLDVFVNNAA-SGVLRPVMELEETHWDWTMNINAKALLFCAQEAAKLMEKNGGGHIVS 138 (258)
T ss_dssp CCCEEEECCC-CCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEE
T ss_pred CCCEEEECCC-CCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEE
Confidence 5688887663 222222 24667888887666 3344444444
No 255
>1bw0_A TAT, protein (tyrosine aminotransferase); tyrosine catabolism, pyridoxal-5'-phosphate, PLP; HET: LLP; 2.50A {Trypanosoma cruzi} SCOP: c.67.1.1
Probab=45.86 E-value=1.2e+02 Score=28.60 Aligned_cols=103 Identities=11% Similarity=0.110 Sum_probs=53.0
Q ss_pred ccCcEEEeccChHHHHHHHHHHHHcCCceEEEEecCCCCcchHHHHHHHHhCCCceEEEc-c---------hHHHHHhhc
Q 045642 198 HQNEVILTLGHSKFVKEFLCAAKEKKRSFEVFIADGAPKFEGHILAKELDKKGLKAIVIT-D---------SAVFAMISR 267 (406)
Q Consensus 198 ~~g~~ILT~g~S~tV~~~L~~A~~~~~~f~ViV~EsrP~~eG~~~a~~L~~~GI~vt~I~-D---------sav~~~m~~ 267 (406)
....+++|.|.+..+..++..+.+.| -+|++.+ |.+.|.. ..+...|+++..++ | ..+-..+..
T Consensus 103 ~~~~v~~~~g~~~al~~~~~~l~~~g--d~vl~~~--p~y~~~~--~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~ 176 (416)
T 1bw0_A 103 VKDNVVLCSGGSHGILMAITAICDAG--DYALVPQ--PGFPHYE--TVCKAYGIGMHFYNCRPENDWEADLDEIRRLKDD 176 (416)
T ss_dssp CGGGEEEESHHHHHHHHHHHHHCCTT--CEEEEEE--SCCTHHH--HHHHHTTCEEEEEEEEGGGTTEECHHHHHHHCCT
T ss_pred CcceEEEeCChHHHHHHHHHHhCCCC--CEEEEcC--CCcHhHH--HHHHHcCcEEEEeecCcccCCCCCHHHHHHHhcc
Confidence 34567888887777776666664333 3566553 5566643 23456788877664 1 122222322
Q ss_pred CCEEEEcceeEeeCCCcccccchHHHHHHHhhCCCceEE
Q 045642 268 VNMVIVGVHAVMANGGVIAPAGLHVLALAAKKHDVPFVV 306 (406)
Q Consensus 268 vd~VllGAdav~~nG~vvnk~GT~~lAl~Ak~~~vPv~V 306 (406)
-.++++=++---+.|.+..+-=-..++-.|+.+++++++
T Consensus 177 ~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~ 215 (416)
T 1bw0_A 177 KTKLLIVTNPSNPCGSNFSRKHVEDIVRLAEELRLPLFS 215 (416)
T ss_dssp TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCCEEE
T ss_pred CCeEEEEeCCCCCCCcccCHHHHHHHHHHHHHcCCEEEE
Confidence 123332222111123222211134466778899998886
No 256
>1d2f_A MALY protein; aminotransferase fold, large PLP-binding domain, small C-TER domain, open alpha-beta structure., transferase; HET: PLP; 2.50A {Escherichia coli} SCOP: c.67.1.3
Probab=45.72 E-value=1.4e+02 Score=28.05 Aligned_cols=101 Identities=15% Similarity=0.247 Sum_probs=53.5
Q ss_pred cCcEEEeccChHHHHHHHHHHHHcCCceEEEEecCCCCcchHHHHHHHHhCCCceEEEc----------c-hHHHHHhh-
Q 045642 199 QNEVILTLGHSKFVKEFLCAAKEKKRSFEVFIADGAPKFEGHILAKELDKKGLKAIVIT----------D-SAVFAMIS- 266 (406)
Q Consensus 199 ~g~~ILT~g~S~tV~~~L~~A~~~~~~f~ViV~EsrP~~eG~~~a~~L~~~GI~vt~I~----------D-sav~~~m~- 266 (406)
...+++|.|.+..+..++..+.+.| -+|++. .|.+.|... .+...|.++..++ | ..+-..+.
T Consensus 87 ~~~v~~t~g~~~al~~~~~~l~~~g--d~vl~~--~p~y~~~~~--~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~l~~ 160 (390)
T 1d2f_A 87 SQTVVYGPSVIYMVSELIRQWSETG--EGVVIH--TPAYDAFYK--AIEGNQRTVMPVALEKQADGWFCDMGKLEAVLAK 160 (390)
T ss_dssp GGGEEEESCHHHHHHHHHHHSSCTT--CEEEEE--ESCCHHHHH--HHHHTTCEEEEEECEECSSSEECCHHHHHHHHTS
T ss_pred HHHEEEcCCHHHHHHHHHHHhcCCC--CEEEEc--CCCcHHHHH--HHHHCCCEEEEeecccCCCccccCHHHHHHHhcc
Confidence 4467788777777766666654333 355554 466776432 2345687776654 1 12333333
Q ss_pred -cCCEEEEcceeEeeCCCcccccchHHHHHHHhhCCCceEE
Q 045642 267 -RVNMVIVGVHAVMANGGVIAPAGLHVLALAAKKHDVPFVV 306 (406)
Q Consensus 267 -~vd~VllGAdav~~nG~vvnk~GT~~lAl~Ak~~~vPv~V 306 (406)
++..|++ +.---+.|.+...-=-..++-.|+++++++++
T Consensus 161 ~~~~~v~l-~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~ 200 (390)
T 1d2f_A 161 PECKIMLL-CSPQNPTGKVWTCDELEIMADLCERHGVRVIS 200 (390)
T ss_dssp TTEEEEEE-ESSCTTTCCCCCTTHHHHHHHHHHHTTCEEEE
T ss_pred CCCeEEEE-eCCCCCCCcCcCHHHHHHHHHHHHHcCCEEEE
Confidence 3334443 22211223333222123567788999998876
No 257
>2fp4_A Succinyl-COA ligase [GDP-forming] alpha-chain, mitochondrial; active site phosphohistidine residue; HET: NEP GTP; 2.08A {Sus scrofa} SCOP: c.2.1.8 c.23.4.1 PDB: 2fpg_A* 2fpi_A* 2fpp_A* 1euc_A* 1eud_A*
Probab=45.63 E-value=15 Score=34.93 Aligned_cols=106 Identities=10% Similarity=0.114 Sum_probs=67.1
Q ss_pred cCcEEEeccChHHHHHHHHHHHHcCCceEEEEecCCCCcchHHHHHHHHhC-CCceEEEcchHHHHHhhcCCEEEEccee
Q 045642 199 QNEVILTLGHSKFVKEFLCAAKEKKRSFEVFIADGAPKFEGHILAKELDKK-GLKAIVITDSAVFAMISRVNMVIVGVHA 277 (406)
Q Consensus 199 ~g~~ILT~g~S~tV~~~L~~A~~~~~~f~ViV~EsrP~~eG~~~a~~L~~~-GI~vt~I~Dsav~~~m~~vd~VllGAda 277 (406)
+-|.++.+-....+...+.++.+.|.+.-|++.+.-|..+-+.+.+.+.+. |+. +|-.+.++.+.+...+.-.-+..
T Consensus 71 ~vD~avI~vP~~~~~~~~~e~i~~Gi~~iv~~t~G~~~~~~~~l~~~a~~~~gi~--liGPnc~Gii~p~~~~~~~~~~~ 148 (305)
T 2fp4_A 71 GATASVIYVPPPFAAAAINEAIDAEVPLVVCITEGIPQQDMVRVKHRLLRQGKTR--LIGPNCPGVINPGECKIGIMPGH 148 (305)
T ss_dssp CCCEEEECCCHHHHHHHHHHHHHTTCSEEEECCCCCCHHHHHHHHHHHTTCSSCE--EECSSSCEEEETTTEEEESSCGG
T ss_pred CCCEEEEecCHHHHHHHHHHHHHCCCCEEEEECCCCChHHHHHHHHHHHhcCCcE--EEeCCCCeEecccccceeecccc
Confidence 347777777888999999999988876656666666544444677777777 765 55555555444443222111111
Q ss_pred EeeCC--CcccccchHHHHHH--HhhCCCceEE
Q 045642 278 VMANG--GVIAPAGLHVLALA--AKKHDVPFVV 306 (406)
Q Consensus 278 v~~nG--~vvnk~GT~~lAl~--Ak~~~vPv~V 306 (406)
+..-| +++++.|+...+++ +...++.|--
T Consensus 149 ~~~~G~va~vSqSG~l~~~~~~~~~~~g~G~S~ 181 (305)
T 2fp4_A 149 IHKKGRIGIVSRSGTLTYEAVHQTTQVGLGQSL 181 (305)
T ss_dssp GCCEEEEEEEESCSHHHHHHHHHHHHTTCCEEE
T ss_pred CCCCCCEEEEecchHHHHHHHHHHHhcCCCeeE
Confidence 22233 67899999987775 6667777643
No 258
>3tcm_A Alanine aminotransferase 2; pyridoxal phosphate (PLP)-binding; HET: DCS; 2.71A {Hordeum vulgare}
Probab=45.56 E-value=1.3e+02 Score=29.97 Aligned_cols=104 Identities=14% Similarity=0.147 Sum_probs=53.9
Q ss_pred cccCcEEEeccChHHHHHHHHHHHHcCCceEEEEecCCCCcchHHHHHHHHhCCCceEEEc-c---------hHHHHHhh
Q 045642 197 IHQNEVILTLGHSKFVKEFLCAAKEKKRSFEVFIADGAPKFEGHILAKELDKKGLKAIVIT-D---------SAVFAMIS 266 (406)
Q Consensus 197 I~~g~~ILT~g~S~tV~~~L~~A~~~~~~f~ViV~EsrP~~eG~~~a~~L~~~GI~vt~I~-D---------sav~~~m~ 266 (406)
+...++++|-|.+..+..++.... .+..-+|++.+ |.+.+.. ..+...|..+..++ | ..+-..+.
T Consensus 155 ~~~~~i~~t~G~~~al~~~~~~l~-~~~gd~Vlv~~--p~y~~~~--~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~ 229 (500)
T 3tcm_A 155 ANADDIFLTDGASPGVHLMMQLLI-RNEKDGILVPI--PQYPLYS--ASIALHGGALVPYYLNESTGWGLETSDVKKQLE 229 (500)
T ss_dssp CCGGGEEEESSSHHHHHHHHHHHC-CSTTEEEEEEE--SCCTHHH--HHHHHTTCEEEEEECBTTTTSBCCHHHHHHHHH
T ss_pred CCcccEEEcCCHHHHHHHHHHHHc-CCCCCEEEEeC--CCcHhHH--HHHHHcCCEEEEEecccccCCCCCHHHHHHHHH
Confidence 345578888888877777766653 12334555553 6555533 23444677766554 1 12333333
Q ss_pred c-------CCEEEEcceeEeeCCCcccccchHHHHHHHhhCCCceEE
Q 045642 267 R-------VNMVIVGVHAVMANGGVIAPAGLHVLALAAKKHDVPFVV 306 (406)
Q Consensus 267 ~-------vd~VllGAdav~~nG~vvnk~GT~~lAl~Ak~~~vPv~V 306 (406)
. +..|++- .-=-+-|.++..---..++-+|+++++.+++
T Consensus 230 ~~~~~~~~~k~ivl~-~p~NPtG~~~s~~~l~~i~~la~~~~~~li~ 275 (500)
T 3tcm_A 230 DARSRGINVRALVVI-NPGNPTGQVLAEENQYDIVKFCKNEGLVLLA 275 (500)
T ss_dssp HHHHTTCEEEEEEEE-SSCTTTCCCCCHHHHHHHHHHHHHHTCEEEE
T ss_pred HHHhcCCCceEEEEE-CCCCCCcccCCHHHHHHHHHHHHHcCCEEEE
Confidence 2 2222221 1111223333333334566678888888776
No 259
>4hvk_A Probable cysteine desulfurase 2; transferase and ISCS, transferase; HET: PMP PG4; 1.43A {Archaeoglobus fulgidus} PDB: 4eb7_A* 4eb5_A*
Probab=45.43 E-value=1.8e+02 Score=26.58 Aligned_cols=98 Identities=14% Similarity=0.124 Sum_probs=51.7
Q ss_pred cEEEeccChHHHHHHHHHHH----HcCCceEEEEecCCCCcchH-HHHHHHHhCCCceEEEcch--------HHHHHhhc
Q 045642 201 EVILTLGHSKFVKEFLCAAK----EKKRSFEVFIADGAPKFEGH-ILAKELDKKGLKAIVITDS--------AVFAMISR 267 (406)
Q Consensus 201 ~~ILT~g~S~tV~~~L~~A~----~~~~~f~ViV~EsrP~~eG~-~~a~~L~~~GI~vt~I~Ds--------av~~~m~~ 267 (406)
.+++|.|.+..+..++.... +.| -+|++. .|.+.+. ..+..+...|+.+..++-. ++-..+..
T Consensus 62 ~i~~~~g~~~a~~~~~~~~~~~~~~~g--d~vi~~--~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~ 137 (382)
T 4hvk_A 62 TVVFTSGATEANNLAIIGYAMRNARKG--KHILVS--AVEHMSVINPAKFLQKQGFEVEYIPVGKYGEVDVSFIDQKLRD 137 (382)
T ss_dssp EEEEESSHHHHHHHHHHHHHHHHGGGC--CEEEEE--TTCCHHHHHHHHHHHHTTCEEEEECBCTTSCBCHHHHHHHCCT
T ss_pred eEEEECCchHHHHHHHHHhhhhhcCCC--CEEEEC--CCCcHHHHHHHHHHHhcCCEEEEeccCCCCCcCHHHHHHHhcc
Confidence 46677666666655555554 333 356664 3444443 3445566789998888622 23333332
Q ss_pred CCEEEEcceeEeeCCCcccccchHHHHHHHhhCCCceEE
Q 045642 268 VNMVIVGVHAVMANGGVIAPAGLHVLALAAKKHDVPFVV 306 (406)
Q Consensus 268 vd~VllGAdav~~nG~vvnk~GT~~lAl~Ak~~~vPv~V 306 (406)
-+++++-...--..|.+.. --.++-+|+.+++ |++
T Consensus 138 ~~~~v~~~~~~nptG~~~~---~~~i~~l~~~~~~-li~ 172 (382)
T 4hvk_A 138 DTILVSVQHANNEIGTIQP---VEEISEVLAGKAA-LHI 172 (382)
T ss_dssp TEEEEECCSBCTTTCBBCC---HHHHHHHHSSSSE-EEE
T ss_pred CceEEEEECCCCCceeeCC---HHHHHHHHHHcCE-EEE
Confidence 2234333322222333322 2367778898988 554
No 260
>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}
Probab=45.32 E-value=86 Score=27.44 Aligned_cols=75 Identities=13% Similarity=0.250 Sum_probs=47.7
Q ss_pred cCcEEEeccChHHHHHHHHHH-HHcCCceEEEEecCCCCcchHHHHHHHHhCCCceEEE-cc----hHHHHHhh------
Q 045642 199 QNEVILTLGHSKFVKEFLCAA-KEKKRSFEVFIADGAPKFEGHILAKELDKKGLKAIVI-TD----SAVFAMIS------ 266 (406)
Q Consensus 199 ~g~~ILT~g~S~tV~~~L~~A-~~~~~~f~ViV~EsrP~~eG~~~a~~L~~~GI~vt~I-~D----sav~~~m~------ 266 (406)
.|.+||..|.++.+=..+... .++ ..+|+++..|.......+.+.|.+.|.++.++ .| ..+..++.
T Consensus 4 ~~~~vlItGasggiG~~~a~~l~~~--G~~V~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 81 (247)
T 2hq1_A 4 KGKTAIVTGSSRGLGKAIAWKLGNM--GANIVLNGSPASTSLDATAEEFKAAGINVVVAKGDVKNPEDVENMVKTAMDAF 81 (247)
T ss_dssp TTCEEEESSCSSHHHHHHHHHHHHT--TCEEEEEECTTCSHHHHHHHHHHHTTCCEEEEESCTTSHHHHHHHHHHHHHHH
T ss_pred CCcEEEEECCCchHHHHHHHHHHHC--CCEEEEEcCcCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHhc
Confidence 356788888887776655444 333 46888886555444556777888778776655 33 23444444
Q ss_pred -cCCEEEEcc
Q 045642 267 -RVNMVIVGV 275 (406)
Q Consensus 267 -~vd~VllGA 275 (406)
++|.||--|
T Consensus 82 ~~~d~vi~~A 91 (247)
T 2hq1_A 82 GRIDILVNNA 91 (247)
T ss_dssp SCCCEEEECC
T ss_pred CCCCEEEECC
Confidence 678887765
No 261
>1pff_A Methionine gamma-lyase; homocysteine; 2.50A {Trichomonas vaginalis} SCOP: c.67.1.3
Probab=45.18 E-value=81 Score=28.86 Aligned_cols=99 Identities=13% Similarity=0.074 Sum_probs=53.0
Q ss_pred CcEEEeccChHHHHHHHHHHHHcCCceEEEEecCCCCcchH-HHHHH-HHhCCCceEEEcc---hHHHHHhh-cCCEEEE
Q 045642 200 NEVILTLGHSKFVKEFLCAAKEKKRSFEVFIADGAPKFEGH-ILAKE-LDKKGLKAIVITD---SAVFAMIS-RVNMVIV 273 (406)
Q Consensus 200 g~~ILT~g~S~tV~~~L~~A~~~~~~f~ViV~EsrP~~eG~-~~a~~-L~~~GI~vt~I~D---sav~~~m~-~vd~Vll 273 (406)
.+.|++.+.+..+..++....+ +.-+|++. .|.+.+. ..+.. +...|+++..++- ..+-..+. +...|++
T Consensus 14 ~~~i~~~sG~~a~~~~~~~~~~--~g~~v~~~--~~~~~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~i~~~~~~v~~ 89 (331)
T 1pff_A 14 EACAATASGMGAIAASVWTFLK--AGDHLISD--DCLYGCTHALFEHQLRKFGVEVDFIDMAVPGNIEKHLKPNTRIVYF 89 (331)
T ss_dssp SEEEEESSHHHHHHHHHHHHCC--TTCEEEEE--SCCCHHHHHHHHTHHHHTTCEEEEECTTSTTHHHHTCCTTEEEEEE
T ss_pred CeEEEeCChHHHHHHHHHHhcC--CCCEEEEc--CCCcchHHHHHHHHHHhcCCEEEEeCCCCHHHHHHhhcCCCeEEEE
Confidence 3566665556555555554432 33456665 4667664 33333 4568999888862 22333332 2333333
Q ss_pred cceeEeeCCCcccccchHHHHHHHhh-CCCceEE
Q 045642 274 GVHAVMANGGVIAPAGLHVLALAAKK-HDVPFVV 306 (406)
Q Consensus 274 GAdav~~nG~vvnk~GT~~lAl~Ak~-~~vPv~V 306 (406)
...--..|.+.. -..++-+|++ +++++++
T Consensus 90 -~~~~nptG~~~~---~~~i~~~~~~~~~~~li~ 119 (331)
T 1pff_A 90 -ETPANPTLKVID---IEDAVKQARKQKDILVIV 119 (331)
T ss_dssp -ESSCTTTCCCCC---HHHHHHHHTTSSSCEEEE
T ss_pred -ECCCCCcCcccC---HHHHHHHHhhhcCCEEEE
Confidence 221122343332 3567778899 9998876
No 262
>2okj_A Glutamate decarboxylase 1; PLP-dependent decarboxylase, lyase; HET: LLP PLZ; 2.30A {Homo sapiens} PDB: 2okk_A*
Probab=45.16 E-value=1.9e+02 Score=28.48 Aligned_cols=103 Identities=17% Similarity=0.127 Sum_probs=54.5
Q ss_pred cCcEEEeccChHHHHHHHHHHHH--------cC----CceEEEEecCCCCcchHHHHHHHHhCCC-ceEEEcc-------
Q 045642 199 QNEVILTLGHSKFVKEFLCAAKE--------KK----RSFEVFIADGAPKFEGHILAKELDKKGL-KAIVITD------- 258 (406)
Q Consensus 199 ~g~~ILT~g~S~tV~~~L~~A~~--------~~----~~f~ViV~EsrP~~eG~~~a~~L~~~GI-~vt~I~D------- 258 (406)
.+..++|-|.|..+...+..+.. .| .+..|++.+ +.+-...-+..+...|. .+..++-
T Consensus 151 ~~~~~~t~ggtea~~~al~~~~~~~~~~~~~~G~~~~~~~~v~~s~--~~h~s~~~~~~~~g~g~~~v~~v~~~~~~~~d 228 (504)
T 2okj_A 151 DGDGIFSPGGAISNMYSIMAARYKYFPEVKTKGMAAVPKLVLFTSE--QSHYSIKKAGAALGFGTDNVILIKCNERGKII 228 (504)
T ss_dssp SCEEEEESSHHHHHHHHHHHHHHHHCTTHHHHCGGGSCCEEEEEET--TSCTHHHHHHHHTTSCGGGEEEECBCTTSCBC
T ss_pred CCCEEEeCCcHHHHHHHHHHHHHHHhhHHhhcCccccCCeEEEECC--cchHHHHHHHHHcCCCcccEEEEecCCCCCCC
Confidence 45688888888877777777642 34 245666654 33333222222222344 7777752
Q ss_pred -hHHHHHhhc------CCEEEEcceeEeeCCCcccccchHHHHHHHhhCCCceEE
Q 045642 259 -SAVFAMISR------VNMVIVGVHAVMANGGVIAPAGLHVLALAAKKHDVPFVV 306 (406)
Q Consensus 259 -sav~~~m~~------vd~VllGAdav~~nG~vvnk~GT~~lAl~Ak~~~vPv~V 306 (406)
.++-..+.+ ..++|+....-...|.+ .. -..|+-+|++++++++|
T Consensus 229 ~~~L~~~i~~~~~~g~~~~~V~~~~~~~~tG~i-~~--l~~I~~la~~~g~~lhv 280 (504)
T 2okj_A 229 PADFEAKILEAKQKGYVPFYVNATAGTTVYGAF-DP--IQEIADICEKYNLWLHV 280 (504)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEEECBSCSSSCCB-CC--HHHHHHHHHHHTCEEEE
T ss_pred HHHHHHHHHHHHHCCCCceEEEEeCCCCCCCCc-CC--HHHHHHHHHHcCCEEEE
Confidence 133333433 23444433221222332 22 24677889999999877
No 263
>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}
Probab=45.16 E-value=1.7e+02 Score=26.63 Aligned_cols=108 Identities=18% Similarity=0.250 Sum_probs=65.5
Q ss_pred cCcEEEeccChHHHHHHHHHHHHcCCceEEEEecCCCCc------chHHHHHHHHhCCCceEEE-cc----hHHHHHhh-
Q 045642 199 QNEVILTLGHSKFVKEFLCAAKEKKRSFEVFIADGAPKF------EGHILAKELDKKGLKAIVI-TD----SAVFAMIS- 266 (406)
Q Consensus 199 ~g~~ILT~g~S~tV~~~L~~A~~~~~~f~ViV~EsrP~~------eG~~~a~~L~~~GI~vt~I-~D----sav~~~m~- 266 (406)
.|.++|+.|.|+-+=..+..... .+..+|+++.-++.. .-..+++++.+.|..+.++ .| .++..++.
T Consensus 8 ~~k~vlVTGas~GIG~aia~~l~-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~ 86 (285)
T 3sc4_A 8 RGKTMFISGGSRGIGLAIAKRVA-ADGANVALVAKSAEPHPKLPGTIYTAAKEIEEAGGQALPIVGDIRDGDAVAAAVAK 86 (285)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHH-TTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHHTSEEEEEECCTTSHHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHH-HCCCEEEEEECChhhhhhhhHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHH
Confidence 46788888888877766655442 234678887655432 3356788888888777765 23 23333333
Q ss_pred ------cCCEEEEcceeEeeCCCc-------------ccccchHHHHHHHhhC----CCceEEec
Q 045642 267 ------RVNMVIVGVHAVMANGGV-------------IAPAGLHVLALAAKKH----DVPFVVVA 308 (406)
Q Consensus 267 ------~vd~VllGAdav~~nG~v-------------vnk~GT~~lAl~Ak~~----~vPv~V~a 308 (406)
++|.+|-.|- +...+.+ +|-.|++.++.++..+ +...+|..
T Consensus 87 ~~~~~g~id~lvnnAg-~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~i 150 (285)
T 3sc4_A 87 TVEQFGGIDICVNNAS-AINLGSIEEVPLKRFDLMNGIQVRGTYAVSQSCIPHMKGRDNPHILTL 150 (285)
T ss_dssp HHHHHSCCSEEEECCC-CCCCCCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGTTTSSSCEEEEC
T ss_pred HHHHcCCCCEEEECCC-CCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEE
Confidence 6888877663 3333332 5777888888766543 44444443
No 264
>1gd9_A Aspartate aminotransferase; pyridoxal enzyme, temperature dependence O substrate recognition; HET: PLP; 1.80A {Pyrococcus horikoshii} SCOP: c.67.1.1 PDB: 1gde_A* 1dju_A*
Probab=44.97 E-value=1.3e+02 Score=28.08 Aligned_cols=102 Identities=18% Similarity=0.221 Sum_probs=53.3
Q ss_pred ccCc-EEEeccChHHHHHHHHHHHHcCCceEEEEecCCCCcchHHHHHHHHhCCCceEEEcch----------HHHHHhh
Q 045642 198 HQNE-VILTLGHSKFVKEFLCAAKEKKRSFEVFIADGAPKFEGHILAKELDKKGLKAIVITDS----------AVFAMIS 266 (406)
Q Consensus 198 ~~g~-~ILT~g~S~tV~~~L~~A~~~~~~f~ViV~EsrP~~eG~~~a~~L~~~GI~vt~I~Ds----------av~~~m~ 266 (406)
.... +++|.|.+..+..++..+.+.| -+|++.+ |.+.|... .+...|+++..++-. .+-..+.
T Consensus 85 ~~~~~v~~~~g~~~a~~~~~~~~~~~g--d~vl~~~--~~~~~~~~--~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~ 158 (389)
T 1gd9_A 85 DPKTEIMVLLGANQAFLMGLSAFLKDG--EEVLIPT--PAFVSYAP--AVILAGGKPVEVPTYEEDEFRLNVDELKKYVT 158 (389)
T ss_dssp CTTTSEEEESSTTHHHHHHHTTTCCTT--CEEEEEE--SCCTTHHH--HHHHHTCEEEEEECCGGGTTCCCHHHHHHHCC
T ss_pred CCCCeEEEcCChHHHHHHHHHHhCCCC--CEEEEcC--CCchhHHH--HHHHCCCEEEEeccCCccCCCCCHHHHHHhcC
Confidence 3456 8888888888877776664333 3555553 55556432 234468887777521 1222222
Q ss_pred -cCCEEEEcceeEeeCCCcccccchHHHHHHHhhCCCceEE
Q 045642 267 -RVNMVIVGVHAVMANGGVIAPAGLHVLALAAKKHDVPFVV 306 (406)
Q Consensus 267 -~vd~VllGAdav~~nG~vvnk~GT~~lAl~Ak~~~vPv~V 306 (406)
++..|++ ...--+.|.+...-=-..++-.|++|++++++
T Consensus 159 ~~~~~v~~-~~~~nptG~~~~~~~l~~l~~~~~~~~~~li~ 198 (389)
T 1gd9_A 159 DKTRALII-NSPCNPTGAVLTKKDLEEIADFVVEHDLIVIS 198 (389)
T ss_dssp TTEEEEEE-ESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEE
T ss_pred cCceEEEE-ECCCCCCCcCCCHHHHHHHHHHHHHcCCEEEE
Confidence 2222332 11111123322211223466788899998876
No 265
>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*
Probab=44.77 E-value=1e+02 Score=27.93 Aligned_cols=98 Identities=17% Similarity=0.192 Sum_probs=57.6
Q ss_pred cCcEEEeccChHHHHHHHHHHH-HcCCceEEEEecCCCCcchHHHHHHHHhCCCceEEE-cc----hHHHHHhh------
Q 045642 199 QNEVILTLGHSKFVKEFLCAAK-EKKRSFEVFIADGAPKFEGHILAKELDKKGLKAIVI-TD----SAVFAMIS------ 266 (406)
Q Consensus 199 ~g~~ILT~g~S~tV~~~L~~A~-~~~~~f~ViV~EsrP~~eG~~~a~~L~~~GI~vt~I-~D----sav~~~m~------ 266 (406)
.+.+||+.|.|+.+=..+.... ++| .+|+++.-++ .....++++|.+.|.++.++ .| .++..++.
T Consensus 21 ~~k~vlVTGas~gIG~~ia~~l~~~G--~~V~~~~r~~-~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 97 (277)
T 2rhc_B 21 DSEVALVTGATSGIGLEIARRLGKEG--LRVFVCARGE-EGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVERY 97 (277)
T ss_dssp TSCEEEEETCSSHHHHHHHHHHHHTT--CEEEEEESCH-HHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCC--CEEEEEeCCH-HHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHh
Confidence 4567888888877766554443 334 6788775443 23345677787777666654 34 23333333
Q ss_pred -cCCEEEEcceeEeeCCCc-------------ccccchHHHHHHHhhC
Q 045642 267 -RVNMVIVGVHAVMANGGV-------------IAPAGLHVLALAAKKH 300 (406)
Q Consensus 267 -~vd~VllGAdav~~nG~v-------------vnk~GT~~lAl~Ak~~ 300 (406)
++|.||--|- +...+.+ +|-.|+..++.++..+
T Consensus 98 g~iD~lv~~Ag-~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~ 144 (277)
T 2rhc_B 98 GPVDVLVNNAG-RPGGGATAELADELWLDVVETNLTGVFRVTKQVLKA 144 (277)
T ss_dssp CSCSEEEECCC-CCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTT
T ss_pred CCCCEEEECCC-CCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhCh
Confidence 5787776552 2222221 3667888877766554
No 266
>3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A
Probab=44.69 E-value=65 Score=30.99 Aligned_cols=72 Identities=13% Similarity=0.217 Sum_probs=46.5
Q ss_pred cccCcEEEeccChHHHHHHHHHHHHcCCceEEEEecCCCCcchHHHHHHHHhCCCceEEEc---c-hHHHHHhhcCCEEE
Q 045642 197 IHQNEVILTLGHSKFVKEFLCAAKEKKRSFEVFIADGAPKFEGHILAKELDKKGLKAIVIT---D-SAVFAMISRVNMVI 272 (406)
Q Consensus 197 I~~g~~ILT~g~S~tV~~~L~~A~~~~~~f~ViV~EsrP~~eG~~~a~~L~~~GI~vt~I~---D-sav~~~m~~vd~Vl 272 (406)
+..+.+|+..|....-..+.+.|.+.| ++|++++..|...+..+| +-.++. | .++..+.+++|.|.
T Consensus 9 ~~~~~~IlIlG~G~lg~~la~aa~~lG--~~viv~d~~~~~p~~~~a--------d~~~~~~~~d~~~l~~~~~~~dvi~ 78 (377)
T 3orq_A 9 LKFGATIGIIGGGQLGKMMAQSAQKMG--YKVVVLDPSEDCPCRYVA--------HEFIQAKYDDEKALNQLGQKCDVIT 78 (377)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTT--CEEEEEESCTTCTTGGGS--------SEEEECCTTCHHHHHHHHHHCSEEE
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHCC--CEEEEEECCCCChhhhhC--------CEEEECCCCCHHHHHHHHHhCCcce
Confidence 456889999999988888888887654 688888877764432221 112222 2 34555667788887
Q ss_pred EcceeE
Q 045642 273 VGVHAV 278 (406)
Q Consensus 273 lGAdav 278 (406)
.+.+.+
T Consensus 79 ~~~E~~ 84 (377)
T 3orq_A 79 YEFENI 84 (377)
T ss_dssp ESSTTS
T ss_pred eccccc
Confidence 765543
No 267
>2j48_A Two-component sensor kinase; pseudo-receiver, circadian clock, transferase, response regulator, histidine protein kinase; NMR {Synechococcus elongatus}
Probab=44.65 E-value=71 Score=23.48 Aligned_cols=76 Identities=12% Similarity=0.237 Sum_probs=43.9
Q ss_pred EEEEecCCCCcchHHHHHHHHhCCCceEEEcchHHH-HHhh--cCCEEEEcceeEeeCCCcccccchHHHHHHHhh---C
Q 045642 227 EVFIADGAPKFEGHILAKELDKKGLKAIVITDSAVF-AMIS--RVNMVIVGVHAVMANGGVIAPAGLHVLALAAKK---H 300 (406)
Q Consensus 227 ~ViV~EsrP~~eG~~~a~~L~~~GI~vt~I~Dsav~-~~m~--~vd~VllGAdav~~nG~vvnk~GT~~lAl~Ak~---~ 300 (406)
+|.+++..|.. ...+...|...|..|....+..-+ ..+. ..|.||+..+. -...|...+..+.+. .
T Consensus 3 ~iliv~~~~~~-~~~l~~~l~~~g~~v~~~~~~~~~~~~l~~~~~dlii~d~~~-------~~~~~~~~~~~l~~~~~~~ 74 (119)
T 2j48_A 3 HILLLEEEDEA-ATVVCEMLTAAGFKVIWLVDGSTALDQLDLLQPIVILMAWPP-------PDQSCLLLLQHLREHQADP 74 (119)
T ss_dssp EEEEECCCHHH-HHHHHHHHHHTTCEEEEESCHHHHHHHHHHHCCSEEEEECST-------TCCTHHHHHHHHHHTCCCS
T ss_pred EEEEEeCCHHH-HHHHHHHHHhCCcEEEEecCHHHHHHHHHhcCCCEEEEecCC-------CCCCHHHHHHHHHhccccC
Confidence 56677666532 235566677788887776654322 2222 47777776432 123344444444444 5
Q ss_pred CCceEEecCC
Q 045642 301 DVPFVVVAST 310 (406)
Q Consensus 301 ~vPv~V~aes 310 (406)
++|++++++.
T Consensus 75 ~~~ii~~~~~ 84 (119)
T 2j48_A 75 HPPLVLFLGE 84 (119)
T ss_dssp SCCCEEEESS
T ss_pred CCCEEEEeCC
Confidence 7999998864
No 268
>3f6p_A Transcriptional regulatory protein YYCF; unphosphorelated, receiver domain, cytoplasm, DNA-binding, phosphoprotein, transcription regulation; 1.95A {Bacillus subtilis} SCOP: c.23.1.1 PDB: 2zwm_A
Probab=44.59 E-value=88 Score=23.75 Aligned_cols=76 Identities=18% Similarity=0.405 Sum_probs=44.8
Q ss_pred EEEEecCCCCcchHHHHHHHHhCCCceEEEcchHHHH-Hhh--cCCEEEEcceeEeeCCCcccccchHHHHHHHhhCCCc
Q 045642 227 EVFIADGAPKFEGHILAKELDKKGLKAIVITDSAVFA-MIS--RVNMVIVGVHAVMANGGVIAPAGLHVLALAAKKHDVP 303 (406)
Q Consensus 227 ~ViV~EsrP~~eG~~~a~~L~~~GI~vt~I~Dsav~~-~m~--~vd~VllGAdav~~nG~vvnk~GT~~lAl~Ak~~~vP 303 (406)
+|.++|..|.. ...+...|.+.|..|....+..-+. .+. ..|.||+..+ ++ ..-|--.+..+-+.+.+|
T Consensus 4 ~ilivdd~~~~-~~~l~~~L~~~g~~v~~~~~~~~al~~~~~~~~dlii~D~~--~p-----~~~g~~~~~~lr~~~~~~ 75 (120)
T 3f6p_A 4 KILVVDDEKPI-ADILEFNLRKEGYEVHCAHDGNEAVEMVEELQPDLILLDIM--LP-----NKDGVEVCREVRKKYDMP 75 (120)
T ss_dssp EEEEECSCHHH-HHHHHHHHHHTTCEEEEESSHHHHHHHHHTTCCSEEEEETT--ST-----TTHHHHHHHHHHTTCCSC
T ss_pred eEEEEECCHHH-HHHHHHHHHhCCEEEEEeCCHHHHHHHHhhCCCCEEEEeCC--CC-----CCCHHHHHHHHHhcCCCC
Confidence 57777766542 2345566777788777666543322 222 4677777543 22 234555555555667899
Q ss_pred eEEecCC
Q 045642 304 FVVVAST 310 (406)
Q Consensus 304 v~V~aes 310 (406)
+++++..
T Consensus 76 ii~~t~~ 82 (120)
T 3f6p_A 76 IIMLTAK 82 (120)
T ss_dssp EEEEEES
T ss_pred EEEEECC
Confidence 9998753
No 269
>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A
Probab=44.44 E-value=37 Score=30.80 Aligned_cols=101 Identities=16% Similarity=0.261 Sum_probs=64.9
Q ss_pred cCcEEEeccChHHHHHHHHHHHHcCCceEEEEecCCCCcchHHHHHHHHhCCCceEEE-cc----hHHHHHhh-------
Q 045642 199 QNEVILTLGHSKFVKEFLCAAKEKKRSFEVFIADGAPKFEGHILAKELDKKGLKAIVI-TD----SAVFAMIS------- 266 (406)
Q Consensus 199 ~g~~ILT~g~S~tV~~~L~~A~~~~~~f~ViV~EsrP~~eG~~~a~~L~~~GI~vt~I-~D----sav~~~m~------- 266 (406)
.|.++|+.|.|+-+=..+..... ....+|+++..++......+++++.+.|-.+..+ .| .++..++.
T Consensus 17 ~~k~~lVTGas~gIG~aia~~l~-~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 95 (270)
T 3is3_A 17 DGKVALVTGSGRGIGAAVAVHLG-RLGAKVVVNYANSTKDAEKVVSEIKALGSDAIAIKADIRQVPEIVKLFDQAVAHFG 95 (270)
T ss_dssp TTCEEEESCTTSHHHHHHHHHHH-HTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEECCCchHHHHHHHHHH-HCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 46788888888877666644431 2346888887776655667888888888777665 34 23444443
Q ss_pred cCCEEEEcceeEeeCCCc-------------ccccchHHHHHHHhhCC
Q 045642 267 RVNMVIVGVHAVMANGGV-------------IAPAGLHVLALAAKKHD 301 (406)
Q Consensus 267 ~vd~VllGAdav~~nG~v-------------vnk~GT~~lAl~Ak~~~ 301 (406)
++|.+|-.|- +...|.+ +|-.|++.++.++..+-
T Consensus 96 ~id~lvnnAg-~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~ 142 (270)
T 3is3_A 96 HLDIAVSNSG-VVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHL 142 (270)
T ss_dssp CCCEEECCCC-CCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHC
T ss_pred CCCEEEECCC-CCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 5787776553 2333332 46778888887666543
No 270
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=44.43 E-value=77 Score=24.90 Aligned_cols=91 Identities=20% Similarity=0.264 Sum_probs=48.8
Q ss_pred CcEEEeccChHHHHHHHHHHHHcCCceEEEEecCCCCcchHHHHHHHHhCCCceEEEcch---H-HHHH-hhcCCEEEEc
Q 045642 200 NEVILTLGHSKFVKEFLCAAKEKKRSFEVFIADGAPKFEGHILAKELDKKGLKAIVITDS---A-VFAM-ISRVNMVIVG 274 (406)
Q Consensus 200 g~~ILT~g~S~tV~~~L~~A~~~~~~f~ViV~EsrP~~eG~~~a~~L~~~GI~vt~I~Ds---a-v~~~-m~~vd~VllG 274 (406)
+..|+.+|....=..+...+.+.| .+|++++..+. -++.+.+.|..+ +..|. . +... +.++|.|++.
T Consensus 6 ~~~v~I~G~G~iG~~~a~~l~~~g--~~v~~~d~~~~-----~~~~~~~~~~~~-~~~d~~~~~~l~~~~~~~~d~vi~~ 77 (144)
T 2hmt_A 6 NKQFAVIGLGRFGGSIVKELHRMG--HEVLAVDINEE-----KVNAYASYATHA-VIANATEENELLSLGIRNFEYVIVA 77 (144)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTT--CCCEEEESCHH-----HHHTTTTTCSEE-EECCTTCHHHHHTTTGGGCSEEEEC
T ss_pred CCcEEEECCCHHHHHHHHHHHHCC--CEEEEEeCCHH-----HHHHHHHhCCEE-EEeCCCCHHHHHhcCCCCCCEEEEC
Confidence 456778888555555555555555 45677765431 233455556643 22332 1 1111 4567877775
Q ss_pred ceeEeeCCCcccccchHHHHHHHhhCCCceEE
Q 045642 275 VHAVMANGGVIAPAGLHVLALAAKKHDVPFVV 306 (406)
Q Consensus 275 Adav~~nG~vvnk~GT~~lAl~Ak~~~vPv~V 306 (406)
+..- .--...++..|+..+++.++
T Consensus 78 ~~~~--------~~~~~~~~~~~~~~~~~~ii 101 (144)
T 2hmt_A 78 IGAN--------IQASTLTTLLLKELDIPNIW 101 (144)
T ss_dssp CCSC--------HHHHHHHHHHHHHTTCSEEE
T ss_pred CCCc--------hHHHHHHHHHHHHcCCCeEE
Confidence 5320 01223567788888877443
No 271
>3mc6_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxyl phosphate; HET: LLP; 3.15A {Saccharomyces cerevisiae}
Probab=44.40 E-value=1.4e+02 Score=29.38 Aligned_cols=113 Identities=17% Similarity=0.160 Sum_probs=60.8
Q ss_pred HHHHHHHHHhcc----cCcEEEeccChHHHHHHHHHHHH-----cC-CceEEEEecCCCCcchHHHHHHHHhCCCceEEE
Q 045642 187 EGIAEQAMELIH----QNEVILTLGHSKFVKEFLCAAKE-----KK-RSFEVFIADGAPKFEGHILAKELDKKGLKAIVI 256 (406)
Q Consensus 187 ~~I~~~a~~~I~----~g~~ILT~g~S~tV~~~L~~A~~-----~~-~~f~ViV~EsrP~~eG~~~a~~L~~~GI~vt~I 256 (406)
+.+.+..++++. ....++|.|.+..+...+..+.+ .| .+-+|++. +|.+.+ ..+.+...|+.+..+
T Consensus 110 ~~~~~~la~~~g~~~~~~~~~~~~ggt~a~~~a~~a~~~~~~~~~g~~~~~Vi~~--~~~h~~--~~~~~~~~G~~~~~v 185 (497)
T 3mc6_A 110 SEVVSMVLRMFNAPSDTGCGTTTSGGTESLLLACLSAKMYALHHRGITEPEIIAP--VTAHAG--FDKAAYYFGMKLRHV 185 (497)
T ss_dssp HHHHHHHHHHTTCCTTTCCEEEESSHHHHHHHHHHHHHHHHHHHSCCSSCEEEEE--TTSCHH--HHHHHHHSCCEEEEE
T ss_pred HHHHHHHHHHhCCCCCCCeEEEcCcHHHHHHHHHHHHHHHHHhcCCCCCceEEEe--CCccHH--HHHHHHHcCCeEEEE
Confidence 344445555543 34578888888777777776653 23 11356654 445544 334445569988888
Q ss_pred cchH---------HHHHhhcCCEEEEcceeEeeCCCcccccchHHHHHHHhhCCCceEE
Q 045642 257 TDSA---------VFAMISRVNMVIVGVHAVMANGGVIAPAGLHVLALAAKKHDVPFVV 306 (406)
Q Consensus 257 ~Dsa---------v~~~m~~vd~VllGAdav~~nG~vvnk~GT~~lAl~Ak~~~vPv~V 306 (406)
+-.. +-..+..-.++|+...--...|.+.. +- .++-+|+.++++++|
T Consensus 186 ~~~~~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~-l~--~i~~la~~~g~~liv 241 (497)
T 3mc6_A 186 ELDPTTYQVDLGKVKKFINKNTVLLVGSAPNFPHGIADD-IE--GLGKIAQKYKLPLHV 241 (497)
T ss_dssp CBCTTTCSBCTTTTGGGCCSSEEEEEEETTCTTTCCCCS-CT--TTTTHHHHTTCCEEE
T ss_pred ecCcccCcCCHHHHHHHHhhCCEEEEEECCCCCCCcCCC-HH--HHHHHHHHhCCEEEE
Confidence 6321 11122222244443322223344332 22 466788999999987
No 272
>3qli_A Coenzyme A transferase; COEN transferase; 1.90A {Yersinia pestis} PDB: 3qlk_A 3s8d_A
Probab=44.39 E-value=38 Score=34.25 Aligned_cols=96 Identities=10% Similarity=0.118 Sum_probs=60.3
Q ss_pred HHHHHHhcccCcEEEeccChH---HHHHHHHHHHH--cCCceEEEEecC---------C----------CCcchHHHHHH
Q 045642 190 AEQAMELIHQNEVILTLGHSK---FVKEFLCAAKE--KKRSFEVFIADG---------A----------PKFEGHILAKE 245 (406)
Q Consensus 190 ~~~a~~~I~~g~~ILT~g~S~---tV~~~L~~A~~--~~~~f~ViV~Es---------r----------P~~eG~~~a~~ 245 (406)
++.|+++|++|++|.+-|... .+...|.+..+ .-++++++..-+ + |.+.|.. .++
T Consensus 29 aeEAv~lIkdGdtV~~gG~~g~P~~L~~AL~~r~~~g~~~~ltl~~~~~~G~~~~~~~~~~~~~~~~~~~~f~~~~-~R~ 107 (455)
T 3qli_A 29 PEEAVSSIASGSHLSMGMFAAEPPALLKALADRATRGDIGDLRVYYFETAKIAGDTILRYELNNRIKPYSMFVTAV-ERA 107 (455)
T ss_dssp HHHHTTTCCTTCEEEECSGGGSCHHHHHHHHHHHHTTCCCSEEEEESSCCHHHHHTTTCGGGTTTEEEEESSCCHH-HHH
T ss_pred HHHHHHhCCCCCEEEECCcccCHHHHHHHHHHHHhhCCCcceEEEEecccccchhhhhChhhcCcEEEeeCcCChh-HHH
Confidence 456778999999999866544 34444444332 235677764211 1 2334533 444
Q ss_pred HHhCC--------CceEEEcchHHHHHhh---cCCEEEEcceeEeeCCCccc
Q 045642 246 LDKKG--------LKAIVITDSAVFAMIS---RVNMVIVGVHAVMANGGVIA 286 (406)
Q Consensus 246 L~~~G--------I~vt~I~Dsav~~~m~---~vd~VllGAdav~~nG~vvn 286 (406)
+.+.| ++.+-+.-+.+..++. ++|.+++.+...-.+|.+.-
T Consensus 108 ~i~~G~~~~~~~~~~y~p~~ls~~p~~~~~~~~iDVAli~vs~~D~~G~~s~ 159 (455)
T 3qli_A 108 LIRRGIEDGGRKVVNYVPSNFHQAPRLLAEEIGIDTFMHTVSPMDCHGYFSL 159 (455)
T ss_dssp HHHHHHHTTTCCCCCCCCCCGGGHHHHHHTTTCCSEEEEEECCCCTTSEEEC
T ss_pred HHhCCCcccCcCcEEEECccHHHHHHHHHhcCCCCEEEEEEecCCCCceEEE
Confidence 55555 4555555677777774 58999999999988887753
No 273
>3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae}
Probab=44.22 E-value=43 Score=34.24 Aligned_cols=112 Identities=13% Similarity=0.100 Sum_probs=67.3
Q ss_pred hcccCcEEEeccChHHHHHHHHH-HHHcCCceEEEEec-CCCC------------cc-hHHHHHHHHhCCCceEEE-cc-
Q 045642 196 LIHQNEVILTLGHSKFVKEFLCA-AKEKKRSFEVFIAD-GAPK------------FE-GHILAKELDKKGLKAIVI-TD- 258 (406)
Q Consensus 196 ~I~~g~~ILT~g~S~tV~~~L~~-A~~~~~~f~ViV~E-srP~------------~e-G~~~a~~L~~~GI~vt~I-~D- 258 (406)
.+..+.++|+.|.++.+=..+.. ..++|. +++++- +|.. .+ ...++++|.+.|.+++++ .|
T Consensus 247 ~~~~~~~vLITGgsgGIG~~lA~~La~~G~--~~vvl~~~R~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~~~Dv 324 (525)
T 3qp9_A 247 WWQADGTVLVTGAEEPAAAEAARRLARDGA--GHLLLHTTPSGSEGAEGTSGAAEDSGLAGLVAELADLGATATVVTCDL 324 (525)
T ss_dssp SSCTTSEEEESSTTSHHHHHHHHHHHHHTC--CEEEEEECCCC---------------CHHHHHHHHHHTCEEEEEECCT
T ss_pred eecCCCEEEEECCCCcHHHHHHHHHHHcCC--CEEEEEeCCCCCCccccccccccCHHHHHHHHHHHhcCCEEEEEECCC
Confidence 35677888888888776665544 333443 333333 3331 22 357888899999888876 33
Q ss_pred ---hHHHHHhhc------CCEEEEcceeEeeCCCc-------------ccccchHHHHHHHhhCC-----CceEEecCC
Q 045642 259 ---SAVFAMISR------VNMVIVGVHAVMANGGV-------------IAPAGLHVLALAAKKHD-----VPFVVVAST 310 (406)
Q Consensus 259 ---sav~~~m~~------vd~VllGAdav~~nG~v-------------vnk~GT~~lAl~Ak~~~-----vPv~V~aes 310 (406)
.++..++.. +|.||-.| .+..+|.+ +|-.|+..+.-++..+. ..++|+..|
T Consensus 325 td~~~v~~~~~~i~~~g~id~vVh~A-Gv~~~~~~~~~~~~~~~~v~~~nv~g~~~L~~~~~~~~~~~~~~~~iV~~SS 402 (525)
T 3qp9_A 325 TDAEAAARLLAGVSDAHPLSAVLHLP-PTVDSEPLAATDADALARVVTAKATAALHLDRLLREAAAAGGRPPVLVLFSS 402 (525)
T ss_dssp TSHHHHHHHHHTSCTTSCEEEEEECC-CCCCCCCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHTC----CCCEEEEEEE
T ss_pred CCHHHHHHHHHHHHhcCCCcEEEECC-cCCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHhccccccCCCCCEEEEECC
Confidence 355666655 45555544 33444443 24568888887777765 667776544
No 274
>3hn7_A UDP-N-acetylmuramate-L-alanine ligase; ATP-binding, nucleotide-binding, structural genomics, joint for structural genomics, JCSG; HET: MSE; 1.65A {Psychrobacter arcticus 273-4}
Probab=44.05 E-value=47 Score=33.81 Aligned_cols=92 Identities=14% Similarity=0.037 Sum_probs=51.6
Q ss_pred cCcEEEeccChHHHHHHHHHHHHcCCceEEEEecCCCCcchHHHHHHHHhCCCceEEEcchHHHHHhhcCCEEEEcceeE
Q 045642 199 QNEVILTLGHSKFVKEFLCAAKEKKRSFEVFIADGAPKFEGHILAKELDKKGLKAIVITDSAVFAMISRVNMVIVGVHAV 278 (406)
Q Consensus 199 ~g~~ILT~g~S~tV~~~L~~A~~~~~~f~ViV~EsrP~~eG~~~a~~L~~~GI~vt~I~Dsav~~~m~~vd~VllGAdav 278 (406)
.+..|..+|-..+=...+.... ..+.++|.+.|.++... +...|.+.||++.+-.+.. .+...+|.||++.- |
T Consensus 18 ~~~~i~~iGiGg~Gms~lA~~l-~~~G~~V~~sD~~~~~~---~~~~L~~~gi~~~~G~~~~--~~~~~~d~vV~Spg-i 90 (524)
T 3hn7_A 18 QGMHIHILGICGTFMGSLALLA-RALGHTVTGSDANIYPP---MSTQLEQAGVTIEEGYLIA--HLQPAPDLVVVGNA-M 90 (524)
T ss_dssp -CCEEEEETTTSHHHHHHHHHH-HHTTCEEEEEESCCCTT---HHHHHHHTTCEEEESCCGG--GGCSCCSEEEECTT-C
T ss_pred cCCEEEEEEecHhhHHHHHHHH-HhCCCEEEEECCCCCcH---HHHHHHHCCCEEECCCCHH--HcCCCCCEEEECCC-c
Confidence 3455666554444333333322 22457899999886543 4678889999987654432 22346788877641 2
Q ss_pred eeCCCcccccchHHHHHHHhhCCCceEE
Q 045642 279 MANGGVIAPAGLHVLALAAKKHDVPFVV 306 (406)
Q Consensus 279 ~~nG~vvnk~GT~~lAl~Ak~~~vPv~V 306 (406)
-. +.+.-..|++.|+||+-
T Consensus 91 ~~---------~~p~l~~a~~~gi~v~~ 109 (524)
T 3hn7_A 91 KR---------GMDVIEYMLDTGLRYTS 109 (524)
T ss_dssp CT---------TSHHHHHHHHHTCCEEE
T ss_pred CC---------CCHHHHHHHHCCCcEEE
Confidence 11 12333455666666653
No 275
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=44.01 E-value=34 Score=30.35 Aligned_cols=92 Identities=17% Similarity=0.154 Sum_probs=54.1
Q ss_pred CcEEEeccChHHHHHHHHHHHHcCCceEEEEecCCCCcchHHHHHHHHhCCCceEEEcchH---H-HH-HhhcCCEEEEc
Q 045642 200 NEVILTLGHSKFVKEFLCAAKEKKRSFEVFIADGAPKFEGHILAKELDKKGLKAIVITDSA---V-FA-MISRVNMVIVG 274 (406)
Q Consensus 200 g~~ILT~g~S~tV~~~L~~A~~~~~~f~ViV~EsrP~~eG~~~a~~L~~~GI~vt~I~Dsa---v-~~-~m~~vd~VllG 274 (406)
...|+.+|+...-..+.+.+.+ ..+ |++++..|.. ++.+. .|+.+.. -|.. . .. -+.++|.|++.
T Consensus 9 ~~~viI~G~G~~G~~la~~L~~--~g~-v~vid~~~~~-----~~~~~-~~~~~i~-gd~~~~~~l~~a~i~~ad~vi~~ 78 (234)
T 2aef_A 9 SRHVVICGWSESTLECLRELRG--SEV-FVLAEDENVR-----KKVLR-SGANFVH-GDPTRVSDLEKANVRGARAVIVD 78 (234)
T ss_dssp -CEEEEESCCHHHHHHHHHSTT--SEE-EEEESCGGGH-----HHHHH-TTCEEEE-SCTTCHHHHHHTTCTTCSEEEEC
T ss_pred CCEEEEECCChHHHHHHHHHHh--CCe-EEEEECCHHH-----HHHHh-cCCeEEE-cCCCCHHHHHhcCcchhcEEEEc
Confidence 4568888987766666666553 346 8888876542 34445 6776543 3332 1 11 25677877775
Q ss_pred ceeEeeCCCcccccchHHHHHHHhhCCCc--eEEecCC
Q 045642 275 VHAVMANGGVIAPAGLHVLALAAKKHDVP--FVVVAST 310 (406)
Q Consensus 275 Adav~~nG~vvnk~GT~~lAl~Ak~~~vP--v~V~aes 310 (406)
.+ +..-...+++.||..+.. +++-+..
T Consensus 79 ~~---------~d~~n~~~~~~a~~~~~~~~iia~~~~ 107 (234)
T 2aef_A 79 LE---------SDSETIHCILGIRKIDESVRIIAEAER 107 (234)
T ss_dssp CS---------CHHHHHHHHHHHHHHCSSSEEEEECSS
T ss_pred CC---------CcHHHHHHHHHHHHHCCCCeEEEEECC
Confidence 42 123456788889988764 4444433
No 276
>3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A*
Probab=43.87 E-value=1.1e+02 Score=28.85 Aligned_cols=99 Identities=16% Similarity=0.114 Sum_probs=58.7
Q ss_pred ccCcEEEeccChH----HHHH---HHHHHHHcC--CceEEEEecCCCCcchHHHHHHHHhCCCceEE----EcchHHHHH
Q 045642 198 HQNEVILTLGHSK----FVKE---FLCAAKEKK--RSFEVFIADGAPKFEGHILAKELDKKGLKAIV----ITDSAVFAM 264 (406)
Q Consensus 198 ~~g~~ILT~g~S~----tV~~---~L~~A~~~~--~~f~ViV~EsrP~~eG~~~a~~L~~~GI~vt~----I~Dsav~~~ 264 (406)
.++-+|+..|+-. .+.. ++....+++ .+++++++-..|......+.+...+.| ++.. +++..+..+
T Consensus 249 ~~~~~i~~~G~~~~~~Kg~~~li~a~~~l~~~~~~~~~~l~i~G~g~~~~~~~l~~~~~~~~-~~~~~~g~~~~~~~~~~ 327 (439)
T 3fro_A 249 DEGVTFMFIGRFDRGQKGVDVLLKAIEILSSKKEFQEMRFIIIGKGDPELEGWARSLEEKHG-NVKVITEMLSREFVREL 327 (439)
T ss_dssp CSCEEEEEECCSSCTTBCHHHHHHHHHHHHTSGGGGGEEEEEECCCCHHHHHHHHHHHHHCT-TEEEECSCCCHHHHHHH
T ss_pred CCCcEEEEEcccccccccHHHHHHHHHHHHhcccCCCeEEEEEcCCChhHHHHHHHHHhhcC-CEEEEcCCCCHHHHHHH
Confidence 4445566666432 3333 444444333 578888887665321133344444566 6554 355778999
Q ss_pred hhcCCEEEEcceeEeeCCCcccccchHHHHHHHhhCCCceEEe
Q 045642 265 ISRVNMVIVGVHAVMANGGVIAPAGLHVLALAAKKHDVPFVVV 307 (406)
Q Consensus 265 m~~vd~VllGAdav~~nG~vvnk~GT~~lAl~Ak~~~vPv~V~ 307 (406)
+..+|.+++.... .| .| ...+=|-.+|+||++-
T Consensus 328 ~~~adv~v~ps~~---e~-----~~--~~~~EAma~G~Pvi~s 360 (439)
T 3fro_A 328 YGSVDFVIIPSYF---EP-----FG--LVALEAMCLGAIPIAS 360 (439)
T ss_dssp HTTCSEEEECBSC---CS-----SC--HHHHHHHHTTCEEEEE
T ss_pred HHHCCEEEeCCCC---CC-----cc--HHHHHHHHCCCCeEEc
Confidence 9999999987642 22 22 3345677789999873
No 277
>2dgk_A GAD-beta, GADB, glutamate decarboxylase beta; gadbd1-14, autoinhibition, substituted aldamine, lyase; HET: PLP; 1.90A {Escherichia coli} PDB: 2dgm_A* 1pmo_A* 2dgl_A* 1pmm_A* 3fz6_A* 3fz7_A 3fz8_A* 1xey_A*
Probab=43.86 E-value=2.1e+02 Score=27.58 Aligned_cols=97 Identities=14% Similarity=-0.057 Sum_probs=55.5
Q ss_pred EEEeccChHHHHHHHHHHHH--------cC---CceEEEEecCCCCcchHHHHHHHHhCCCceEEEcch---------HH
Q 045642 202 VILTLGHSKFVKEFLCAAKE--------KK---RSFEVFIADGAPKFEGHILAKELDKKGLKAIVITDS---------AV 261 (406)
Q Consensus 202 ~ILT~g~S~tV~~~L~~A~~--------~~---~~f~ViV~EsrP~~eG~~~a~~L~~~GI~vt~I~Ds---------av 261 (406)
.++|-|.+..+...+..+.. .| .+.+|++.+ .+ ....+.+...|+++..++-. ++
T Consensus 106 ~~~t~ggtea~~~al~a~~~~~~~~~~~~G~~~~~~~vi~~~---~h--~~~~~~~~~~G~~v~~v~~~~~~~~~d~~~l 180 (452)
T 2dgk_A 106 GTNTIGSSEACMLGGMAMKWRWRKRMEAAGKPTDKPNLVCGP---VQ--ICWHKFARYWDVELREIPMRPGQLFMDPKRM 180 (452)
T ss_dssp EEEESSHHHHHHHHHHHHHHHHHHHHHHTTCCCSCCEEEESS---CC--HHHHHHHHHTTCEEEECCCBTTBCSCCHHHH
T ss_pred eEEeCCHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEECC---Cc--HHHHHHHHHcCceEEEEecCCCCCeECHHHH
Confidence 78888877776666655542 34 234677754 22 33444556679998888621 23
Q ss_pred HHHhhcCCEEEEcceeEeeCCCcccccchHHHHHHHhh------CCCceEE
Q 045642 262 FAMISRVNMVIVGVHAVMANGGVIAPAGLHVLALAAKK------HDVPFVV 306 (406)
Q Consensus 262 ~~~m~~vd~VllGAdav~~nG~vvnk~GT~~lAl~Ak~------~~vPv~V 306 (406)
-..+.+-+++|+....-...|.+. . --.|+-+|++ ++++|+|
T Consensus 181 ~~~i~~~t~~v~~~~~~n~tG~~~-~--l~~I~~ia~~~~~~~~~~~~l~v 228 (452)
T 2dgk_A 181 IEACDENTIGVVPTFGVTYTGNYE-F--PQPLHDALDKFQADTGIDIDMHI 228 (452)
T ss_dssp HHHCCTTEEEEECBBSCTTTCBBC-C--HHHHHHHHHHHHHHHCCCCCEEE
T ss_pred HHHHhhCCEEEEEEcCCcCCcccC-C--HHHHHHHHHHHhhccCCCCcEEE
Confidence 333333345666555444455443 2 2356666777 4888887
No 278
>2iss_D Glutamine amidotransferase subunit PDXT; (beta/alpha)8-barrel, alpha/beta three layer sandwich, lyase transferase; HET: 5RP; 2.90A {Thermotoga maritima}
Probab=43.72 E-value=32 Score=30.25 Aligned_cols=79 Identities=11% Similarity=0.172 Sum_probs=46.4
Q ss_pred CCceEEEEecCCCCcchHHHHHHHHhCCCceEEEcchHHHHHhhcCCEEEEcceeEeeCCCccc-------ccchHHHHH
Q 045642 223 KRSFEVFIADGAPKFEGHILAKELDKKGLKAIVITDSAVFAMISRVNMVIVGVHAVMANGGVIA-------PAGLHVLAL 295 (406)
Q Consensus 223 ~~~f~ViV~EsrP~~eG~~~a~~L~~~GI~vt~I~Dsav~~~m~~vd~VllGAdav~~nG~vvn-------k~GT~~lAl 295 (406)
+++.+|.|++- +. .=....+.|.+.|+.+.++.+..- +.++|.+|++ ||--. ..+...+-.
T Consensus 18 ~~~~~I~ii~~-~~-~~~~~~~~l~~~g~~~~~~~~~~~---l~~~d~iil~-------GG~~~~~~~~~~~~~~~~~i~ 85 (208)
T 2iss_D 18 GSHMKIGVLGV-QG-DVREHVEALHKLGVETLIVKLPEQ---LDMVDGLILP-------GGESTTMIRILKEMDMDEKLV 85 (208)
T ss_dssp --CCEEEEECS-SS-CHHHHHHHHHHTTCEEEEECSGGG---GGGCSEEEEC-------SSCHHHHHHHHHHTTCHHHHH
T ss_pred CCCcEEEEEEC-CC-chHHHHHHHHHCCCEEEEeCChHH---HhhCCEEEEC-------CCcHHHHHhhhhhhhHHHHHH
Confidence 34567777753 32 113567888889999999876432 4677877774 33111 112222223
Q ss_pred HHhhCCCceEEecCCccc
Q 045642 296 AAKKHDVPFVVVASTHEL 313 (406)
Q Consensus 296 ~Ak~~~vPv~V~aes~K~ 313 (406)
.+...++|++-+|--+.+
T Consensus 86 ~~~~~g~PilGIC~G~Ql 103 (208)
T 2iss_D 86 ERINNGLPVFATCAGVIL 103 (208)
T ss_dssp HHHHTTCCEEEETHHHHH
T ss_pred HHHHCCCeEEEECHHHHH
Confidence 334579999998876554
No 279
>3cai_A Possible aminotransferase; RV3778C; 1.80A {Mycobacterium tuberculosis}
Probab=43.58 E-value=2.1e+02 Score=26.76 Aligned_cols=102 Identities=16% Similarity=0.102 Sum_probs=51.8
Q ss_pred CcEEEeccChHHHHHHHHHHH-HcCCceEEEEecCCCCcchH-HHHHHHHh-CCCceEEEcch---------HHHHHhhc
Q 045642 200 NEVILTLGHSKFVKEFLCAAK-EKKRSFEVFIADGAPKFEGH-ILAKELDK-KGLKAIVITDS---------AVFAMISR 267 (406)
Q Consensus 200 g~~ILT~g~S~tV~~~L~~A~-~~~~~f~ViV~EsrP~~eG~-~~a~~L~~-~GI~vt~I~Ds---------av~~~m~~ 267 (406)
..+++|.|.+..+..++.... ..++.-+|++. .|.+.+. .....+.+ .|..+..++-. .+-..+..
T Consensus 87 ~~v~~~~g~t~al~~~~~~l~~~~~~gd~vi~~--~~~~~~~~~~~~~~~~~~g~~v~~v~~~~~~~~~d~~~l~~~l~~ 164 (406)
T 3cai_A 87 GGVVLGADRAVLLSLLAEASSSRAGLGYEVIVS--RLDDEANIAPWLRAAHRYGAKVKWAEVDIETGELPTWQWESLISK 164 (406)
T ss_dssp GGEEEESCHHHHHHHHHHHTGGGGBTTCEEEEE--TTSCGGGTHHHHHHHHHHBCEEEEECCCTTTCCCCGGGHHHHCCT
T ss_pred CeEEEeCChHHHHHHHHHHHhhccCCCCEEEEc--CCccHHHHHHHHHHHHhcCCeEEEEecCcccCCcCHHHHHHHhCC
Confidence 457777776655555544431 11223356664 3555553 33334433 58888777521 33333332
Q ss_pred CCEEEEcceeEeeCCCcccccchHHHHHHHhhCCCceEE
Q 045642 268 VNMVIVGVHAVMANGGVIAPAGLHVLALAAKKHDVPFVV 306 (406)
Q Consensus 268 vd~VllGAdav~~nG~vvnk~GT~~lAl~Ak~~~vPv~V 306 (406)
-.++|+-...--..|.+.. . ..++-+|+.+++++++
T Consensus 165 ~~~~v~~~~~~nptG~~~~-l--~~i~~l~~~~~~~li~ 200 (406)
T 3cai_A 165 STRLVAVNSASGTLGGVTD-L--RAMTKLVHDVGALVVV 200 (406)
T ss_dssp TEEEEEEESBCTTTCBBCC-C--HHHHHHHHHTTCEEEE
T ss_pred CceEEEEeCCcCCccccCC-H--HHHHHHHHHcCCEEEE
Confidence 2233332222222344333 2 4677888999988776
No 280
>2ahu_A Putative enzyme YDIF; COA transferase, glutamyl thioester, structural genomi montreal-kingston bacterial structural genomics initiative; 1.90A {Escherichia coli} SCOP: c.124.1.3 c.124.1.2 PDB: 2ahv_A* 2ahw_A*
Probab=43.58 E-value=1.7e+02 Score=29.96 Aligned_cols=43 Identities=9% Similarity=0.059 Sum_probs=33.7
Q ss_pred cCCEEEEcceeEeeCCCcccc--cch---HHHHHHHhhCCCceEEecC
Q 045642 267 RVNMVIVGVHAVMANGGVIAP--AGL---HVLALAAKKHDVPFVVVAS 309 (406)
Q Consensus 267 ~vd~VllGAdav~~nG~vvnk--~GT---~~lAl~Ak~~~vPv~V~ae 309 (406)
++|..|+-|...-.+|.+.-. .+. ..+|.+||..+--|+|-++
T Consensus 180 ~~DVAlI~a~~aD~~Gn~~~~~~~~~~~~~~~a~aAk~~gg~VIveVn 227 (531)
T 2ahu_A 180 APDIAFIRATTCDSEGYATFEDEVMYLDALVIAQAVHNNGGIVMMQVQ 227 (531)
T ss_dssp CCSEEEEECSEEETTCCEECTTSSCCTTHHHHHHHHHTTTCEEEEEES
T ss_pred CCeEEEEEcccCCCCceEEEcCcccccCHHHHHHhHhhcCCEEEEEEc
Confidence 589999999999999987754 223 3689999988887777554
No 281
>3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A
Probab=43.54 E-value=1.1e+02 Score=28.30 Aligned_cols=69 Identities=12% Similarity=0.045 Sum_probs=41.8
Q ss_pred CCceEEEEecCCCCcchHHHHHHHHhCCCceEE---EcchHHHHHhhcCCEEEEcceeEeeCCCcccccchHHHHHHHhh
Q 045642 223 KRSFEVFIADGAPKFEGHILAKELDKKGLKAIV---ITDSAVFAMISRVNMVIVGVHAVMANGGVIAPAGLHVLALAAKK 299 (406)
Q Consensus 223 ~~~f~ViV~EsrP~~eG~~~a~~L~~~GI~vt~---I~Dsav~~~m~~vd~VllGAdav~~nG~vvnk~GT~~lAl~Ak~ 299 (406)
..++++++. ..|..+=+..++++....-+|++ +....+..+|..+|.+++.. |+. .+=|-.
T Consensus 236 ~~~~~~i~~-~g~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~ad~~v~~s-------------g~~--~lEA~a 299 (375)
T 3beo_A 236 HEDVQVVYP-VHMNPVVRETANDILGDYGRIHLIEPLDVIDFHNVAARSYLMLTDS-------------GGV--QEEAPS 299 (375)
T ss_dssp CTTEEEEEE-CCSCHHHHHHHHHHHTTCTTEEEECCCCHHHHHHHHHTCSEEEECC-------------HHH--HHHHHH
T ss_pred CCCeEEEEe-CCCCHHHHHHHHHHhhccCCEEEeCCCCHHHHHHHHHhCcEEEECC-------------CCh--HHHHHh
Confidence 446776664 33432113444444321125776 55567889999999997643 333 455777
Q ss_pred CCCceEEe
Q 045642 300 HDVPFVVV 307 (406)
Q Consensus 300 ~~vPv~V~ 307 (406)
+|+||++.
T Consensus 300 ~G~Pvi~~ 307 (375)
T 3beo_A 300 LGVPVLVL 307 (375)
T ss_dssp HTCCEEEC
T ss_pred cCCCEEEe
Confidence 89999975
No 282
>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A
Probab=43.50 E-value=45 Score=30.75 Aligned_cols=110 Identities=19% Similarity=0.095 Sum_probs=58.3
Q ss_pred ccCcEEEeccChHHHHHHHHHH-HHcCCceEEEEecCCCCcchHHHHHHHHh-CCCceEEE--cc----hHHHHHhhcCC
Q 045642 198 HQNEVILTLGHSKFVKEFLCAA-KEKKRSFEVFIADGAPKFEGHILAKELDK-KGLKAIVI--TD----SAVFAMISRVN 269 (406)
Q Consensus 198 ~~g~~ILT~g~S~tV~~~L~~A-~~~~~~f~ViV~EsrP~~eG~~~a~~L~~-~GI~vt~I--~D----sav~~~m~~vd 269 (406)
..+.+||+.|.++.+=..|... .++ ..+|+++.-.+. ....+...+.. .+-.++++ .| .++..++.++|
T Consensus 9 ~~~~~vlVTGatG~iG~~l~~~L~~~--g~~V~~~~r~~~-~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d 85 (342)
T 1y1p_A 9 PEGSLVLVTGANGFVASHVVEQLLEH--GYKVRGTARSAS-KLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVIKGAA 85 (342)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESSHH-HHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTTTTCS
T ss_pred CCCCEEEEECCccHHHHHHHHHHHHC--CCEEEEEeCCcc-cHHHHHHHhhccCCCceEEEEecCCcChHHHHHHHcCCC
Confidence 3567889889887776655443 333 367887754332 12233333332 23345544 34 23334455666
Q ss_pred EEEEcceeEeeCCC-----cccccchHHHHHHHh-hCCCceEEecCC
Q 045642 270 MVIVGVHAVMANGG-----VIAPAGLHVLALAAK-KHDVPFVVVAST 310 (406)
Q Consensus 270 ~VllGAdav~~nG~-----vvnk~GT~~lAl~Ak-~~~vPv~V~aes 310 (406)
.||--|-....+.. -+|-.||..+.-+|+ ..++.-+|.+.|
T Consensus 86 ~vih~A~~~~~~~~~~~~~~~n~~g~~~ll~~~~~~~~~~~iv~~SS 132 (342)
T 1y1p_A 86 GVAHIASVVSFSNKYDEVVTPAIGGTLNALRAAAATPSVKRFVLTSS 132 (342)
T ss_dssp EEEECCCCCSCCSCHHHHHHHHHHHHHHHHHHHHTCTTCCEEEEECC
T ss_pred EEEEeCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCcEEEEecc
Confidence 66654422111001 135689999998887 466655554444
No 283
>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A
Probab=43.45 E-value=51 Score=30.18 Aligned_cols=100 Identities=10% Similarity=0.065 Sum_probs=49.3
Q ss_pred CcEEEeccChHHHHHHHHHHHHcCCceEEEEecCCCCcchHHHHHHHHhCCCceEEEcchHHHHHhhc--CCEEEEccee
Q 045642 200 NEVILTLGHSKFVKEFLCAAKEKKRSFEVFIADGAPKFEGHILAKELDKKGLKAIVITDSAVFAMISR--VNMVIVGVHA 277 (406)
Q Consensus 200 g~~ILT~g~S~tV~~~L~~A~~~~~~f~ViV~EsrP~~eG~~~a~~L~~~GI~vt~I~Dsav~~~m~~--vd~VllGAda 277 (406)
+.+||..|.++.+=..|..... .+..+|+++.-++...+ -+.+-+-...++..++.. +|.||--|-.
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~-~~g~~V~~~~r~~~~~~----------~~~~Dl~d~~~~~~~~~~~~~d~vih~A~~ 70 (315)
T 2ydy_A 2 NRRVLVTGATGLLGRAVHKEFQ-QNNWHAVGCGFRRARPK----------FEQVNLLDSNAVHHIIHDFQPHVIVHCAAE 70 (315)
T ss_dssp CCEEEEETTTSHHHHHHHHHHH-TTTCEEEEEC----------------------------CHHHHHHHCCSEEEECC--
T ss_pred CCeEEEECCCcHHHHHHHHHHH-hCCCeEEEEccCCCCCC----------eEEecCCCHHHHHHHHHhhCCCEEEECCcc
Confidence 3578888888777666655442 23477887763332111 011111111233444553 7877765532
Q ss_pred EeeC--------CCcccccchHHHHHHHhhCCCceEEecCC
Q 045642 278 VMAN--------GGVIAPAGLHVLALAAKKHDVPFVVVAST 310 (406)
Q Consensus 278 v~~n--------G~vvnk~GT~~lAl~Ak~~~vPv~V~aes 310 (406)
...+ ---+|-.||..++-+|+..++.|+.++..
T Consensus 71 ~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~SS~ 111 (315)
T 2ydy_A 71 RRPDVVENQPDAASQLNVDASGNLAKEAAAVGAFLIYISSD 111 (315)
T ss_dssp -----------------CHHHHHHHHHHHHHTCEEEEEEEG
T ss_pred cChhhhhcCHHHHHHHHHHHHHHHHHHHHHcCCeEEEEchH
Confidence 2111 11247789999999999888877666544
No 284
>4e77_A Glutamate-1-semialdehyde 2,1-aminomutase; structural genomics, center for structural genomics of infec diseases, csgid, porphyrin biosynthesis; 2.00A {Yersinia pestis}
Probab=43.39 E-value=48 Score=31.99 Aligned_cols=140 Identities=15% Similarity=0.202 Sum_probs=70.2
Q ss_pred HHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHhcc-cCcEEEeccChHHHHHHHHHHHHcCCceEEEEecCCCCcchHH
Q 045642 165 KKLKSELIKAVNELIE--DINTCREGIAEQAMELIH-QNEVILTLGHSKFVKEFLCAAKEKKRSFEVFIADGAPKFEGHI 241 (406)
Q Consensus 165 ~~~k~~l~~~i~~~~~--e~~~~~~~I~~~a~~~I~-~g~~ILT~g~S~tV~~~L~~A~~~~~~f~ViV~EsrP~~eG~~ 241 (406)
+++++.+.+.++.... --......+++.-+++.. ...+++|-|.|..+...|+.|.....+-+|++.+. .+.|..
T Consensus 72 p~v~~A~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~~v~~~~sGsea~~~al~~a~~~~~~~~ii~~~~--~yhg~~ 149 (429)
T 4e77_A 72 PAIRQAVIEAVERGLSFGAPTEMEVKMAQLVTDLVPTMDMVRMVNSGTEATMSAIRLARGYTGRDKIIKFEG--CYHGHA 149 (429)
T ss_dssp HHHHHHHHHHHTTCSCCSSCCHHHHHHHHHHHHHSTTCSEEEEESSHHHHHHHHHHHHHHHHCCCEEEEETT--CCCC--
T ss_pred HHHHHHHHHHHHhCcccCCCCHHHHHHHHHHHhhCCCCCEEEEeCcHHHHHHHHHHHHHHhhCCCEEEEEcC--ccCCCC
Confidence 4556666665554210 001112233333334442 34578888888888888886653222335666543 344432
Q ss_pred HH-H-----------HHHhCCC------ceEEEc--c-hHHHHHhhc--CCEEEEcceeEeeCCCcccccc--hHHHHHH
Q 045642 242 LA-K-----------ELDKKGL------KAIVIT--D-SAVFAMISR--VNMVIVGVHAVMANGGVIAPAG--LHVLALA 296 (406)
Q Consensus 242 ~a-~-----------~L~~~GI------~vt~I~--D-sav~~~m~~--vd~VllGAdav~~nG~vvnk~G--T~~lAl~ 296 (406)
.. - .....|+ .+..++ | ..+-..+.+ -+..++=++-+..+|+++..-- -..++-+
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep~~~~~g~~~~~~~~l~~l~~l 229 (429)
T 4e77_A 150 DCLLVKAGSGALTLGQPNSPGVPTDFAKHTLTCTYNDLASVRQAFEQYPQEVACIIVEPVAGNMNCIPPLPEFLPGLRAL 229 (429)
T ss_dssp ----------------CCCTTSCGGGGTTEEEECTTCHHHHHHHHHHSTTTEEEEEECSSBCTTSCBCCCTTHHHHHHHH
T ss_pred hhhhhhcCCcccccCCCCcCCCCCccCCceeecCCCCHHHHHHHHHhcCCCEEEEEECCccCCCCCcCCCHHHHHHHHHH
Confidence 21 0 0011222 233332 2 233444442 1333333677888888887644 3456778
Q ss_pred HhhCCCceEE
Q 045642 297 AKKHDVPFVV 306 (406)
Q Consensus 297 Ak~~~vPv~V 306 (406)
|++|++++++
T Consensus 230 ~~~~~~lli~ 239 (429)
T 4e77_A 230 CDEFGALLII 239 (429)
T ss_dssp HHHHTCEEEE
T ss_pred HHHcCCEEEE
Confidence 9999998886
No 285
>2pln_A HP1043, response regulator; signaling protein; 1.80A {Helicobacter pylori} PDB: 2hqo_A
Probab=43.39 E-value=1.1e+02 Score=23.69 Aligned_cols=76 Identities=18% Similarity=0.307 Sum_probs=43.6
Q ss_pred CCceEEEEecCCCCcchHHHHHHHHhCCCceEEEcchHHH-HHhh--cCCEEEEcceeEeeCCCcccccchHHHHHHHhh
Q 045642 223 KRSFEVFIADGAPKFEGHILAKELDKKGLKAIVITDSAVF-AMIS--RVNMVIVGVHAVMANGGVIAPAGLHVLALAAKK 299 (406)
Q Consensus 223 ~~~f~ViV~EsrP~~eG~~~a~~L~~~GI~vt~I~Dsav~-~~m~--~vd~VllGAdav~~nG~vvnk~GT~~lAl~Ak~ 299 (406)
....+|+|+|..|.. ...+...|...|+.|....+..-+ ..+. ..|.|| +.+ ..|--.+..+-+.
T Consensus 16 ~~~~~ilivdd~~~~-~~~l~~~L~~~g~~v~~~~~~~~al~~l~~~~~dlvi------~~~-----~~g~~~~~~l~~~ 83 (137)
T 2pln_A 16 RGSMRVLLIEKNSVL-GGEIEKGLNVKGFMADVTESLEDGEYLMDIRNYDLVM------VSD-----KNALSFVSRIKEK 83 (137)
T ss_dssp TTCSEEEEECSCHHH-HHHHHHHHHHTTCEEEEESCHHHHHHHHHHSCCSEEE------ECS-----TTHHHHHHHHHHH
T ss_pred CCCCeEEEEeCCHHH-HHHHHHHHHHcCcEEEEeCCHHHHHHHHHcCCCCEEE------EcC-----ccHHHHHHHHHhc
Confidence 455678888776642 234566677778888766654322 2222 367777 322 2243334444333
Q ss_pred C-CCceEEecCC
Q 045642 300 H-DVPFVVVAST 310 (406)
Q Consensus 300 ~-~vPv~V~aes 310 (406)
. ++|+++++..
T Consensus 84 ~~~~~ii~ls~~ 95 (137)
T 2pln_A 84 HSSIVVLVSSDN 95 (137)
T ss_dssp STTSEEEEEESS
T ss_pred CCCccEEEEeCC
Confidence 5 8999998754
No 286
>1i4n_A Indole-3-glycerol phosphate synthase; thermostable TIM-barrel protein, salt bridges, electrostatic interactions, lyase; 2.50A {Thermotoga maritima} SCOP: c.1.2.4 PDB: 1j5t_A
Probab=43.30 E-value=17 Score=33.80 Aligned_cols=99 Identities=16% Similarity=0.188 Sum_probs=55.0
Q ss_pred cceeEeeCCCcccccchHHHHHHHhhCCCceEEecCCcccccc-CCC-CccccccccCCcccccccCCcccccccCcCCC
Q 045642 274 GVHAVMANGGVIAPAGLHVLALAAKKHDVPFVVVASTHELCSL-YPH-NLEVLLNEMRCPSELLNFEEFSDCIDYGIASS 351 (406)
Q Consensus 274 GAdav~~nG~vvnk~GT~~lAl~Ak~~~vPv~V~aes~K~~~~-~~~-d~~~i~~e~~~p~ev~~~~~~~~~~~~~~~~~ 351 (406)
|||+|+-+++.....--..+.-.|+.+|.-++|.+.+..=... ... +..-|....++ +-.+
T Consensus 123 GAD~ilLi~a~l~~~~l~~l~~~a~~lGl~~lvEv~~~eE~~~A~~l~g~~iIGinnr~---l~t~-------------- 185 (251)
T 1i4n_A 123 GADAILIIARILTAEQIKEIYEAAEELGMDSLVEVHSREDLEKVFSVIRPKIIGINTRD---LDTF-------------- 185 (251)
T ss_dssp TCSEEEEEGGGSCHHHHHHHHHHHHTTTCEEEEEECSHHHHHHHHTTCCCSEEEEECBC---TTTC--------------
T ss_pred CCCEEEEecccCCHHHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHhcCCCCEEEEeCcc---cccC--------------
Confidence 8888888888766643444556788899999998876441110 011 11111111111 1100
Q ss_pred CCcccccCCcceecCCCCccEEEeCCCCCCChhHHHHHHH
Q 045642 352 SSLLHVVNPAFDYVPPELIRLFVTDIGGYSPSYIYRLIAD 391 (406)
Q Consensus 352 ~~~v~v~np~fD~tPp~lIt~iITE~G~~~Ps~v~~ll~e 391 (406)
...+....-....+|++. .+|+|-|+.+|..+.++..-
T Consensus 186 ~~d~~~~~~l~~~ip~~~--~vIaEsGI~t~edv~~~~~~ 223 (251)
T 1i4n_A 186 EIKKNVLWELLPLVPDDT--VVVAESGIKDPRELKDLRGK 223 (251)
T ss_dssp CBCTTHHHHHGGGSCTTS--EEEEESCCCCGGGHHHHTTT
T ss_pred CCCHHHHHHHHHhCCCCC--EEEEeCCCCCHHHHHHHHHh
Confidence 000111112344567663 58999999999999886543
No 287
>1wl8_A GMP synthase [glutamine-hydrolyzing] subunit A; transferase, gatases, riken structural genomics/proteomics initiative, RSGI; 1.45A {Pyrococcus horikoshii} SCOP: c.23.16.1 PDB: 2d7j_A
Probab=43.28 E-value=82 Score=26.93 Aligned_cols=76 Identities=13% Similarity=0.201 Sum_probs=44.7
Q ss_pred EEEecCCCCcchHHHHHHHHhCCCceEEEcchH-HHHHh-hcCCEEEEcceeEeeCCCcccccchH-HHHHHHhhCCCce
Q 045642 228 VFIADGAPKFEGHILAKELDKKGLKAIVITDSA-VFAMI-SRVNMVIVGVHAVMANGGVIAPAGLH-VLALAAKKHDVPF 304 (406)
Q Consensus 228 ViV~EsrP~~eG~~~a~~L~~~GI~vt~I~Dsa-v~~~m-~~vd~VllGAdav~~nG~vvnk~GT~-~lAl~Ak~~~vPv 304 (406)
|.|++-...+ ...+++.|.+.|+.+++++... ...+. .++|.+|+.--. . ....|.. .+...+...++|+
T Consensus 3 i~iid~~~~~-~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~dglil~Gg~-~-----~~~~~~~~~~i~~~~~~~~Pi 75 (189)
T 1wl8_A 3 IVIMDNGGQY-VHRIWRTLRYLGVETKIIPNTTPLEEIKAMNPKGIIFSGGP-S-----LENTGNCEKVLEHYDEFNVPI 75 (189)
T ss_dssp EEEEECSCTT-HHHHHHHHHHTTCEEEEEETTCCHHHHHHTCCSEEEECCCS-C-----TTCCTTHHHHHHTGGGTCSCE
T ss_pred EEEEECCCch-HHHHHHHHHHCCCeEEEEECCCChHHhcccCCCEEEECCCC-C-----hhhhhhHHHHHHHHhhCCCeE
Confidence 5566655554 4577888999999998887543 22222 258888873211 1 1123432 2222233678999
Q ss_pred EEecCC
Q 045642 305 VVVAST 310 (406)
Q Consensus 305 ~V~aes 310 (406)
+-+|--
T Consensus 76 lGIC~G 81 (189)
T 1wl8_A 76 LGICLG 81 (189)
T ss_dssp EEETHH
T ss_pred EEEcHH
Confidence 998863
No 288
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=42.80 E-value=68 Score=25.91 Aligned_cols=97 Identities=10% Similarity=0.116 Sum_probs=0.0
Q ss_pred CcEEEeccChHHHHHHHHHHHHcCCceEEEEecCCCCcchHHHHHHHHhCCCceEEEcchHHHHHhhcCCEEEEcceeEe
Q 045642 200 NEVILTLGHSKFVKEFLCAAKEKKRSFEVFIADGAPKFEGHILAKELDKKGLKAIVITDSAVFAMISRVNMVIVGVHAVM 279 (406)
Q Consensus 200 g~~ILT~g~S~tV~~~L~~A~~~~~~f~ViV~EsrP~~eG~~~a~~L~~~GI~vt~I~Dsav~~~m~~vd~VllGAdav~ 279 (406)
.+.|+.+|+...=..+.+.+.+.|. .|+++|..| ..++.+.+.|+++ +.-|..-...+.++. +-+||.|+
T Consensus 7 ~~~viIiG~G~~G~~la~~L~~~g~--~v~vid~~~-----~~~~~~~~~g~~~-i~gd~~~~~~l~~a~--i~~ad~vi 76 (140)
T 3fwz_A 7 CNHALLVGYGRVGSLLGEKLLASDI--PLVVIETSR-----TRVDELRERGVRA-VLGNAANEEIMQLAH--LECAKWLI 76 (140)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTTC--CEEEEESCH-----HHHHHHHHTTCEE-EESCTTSHHHHHHTT--GGGCSEEE
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCC--CEEEEECCH-----HHHHHHHHcCCCE-EECCCCCHHHHHhcC--cccCCEEE
Q ss_pred eCCCcccccchHHHHHHHhhCCCceEEec
Q 045642 280 ANGGVIAPAGLHVLALAAKKHDVPFVVVA 308 (406)
Q Consensus 280 ~nG~vvnk~GT~~lAl~Ak~~~vPv~V~a 308 (406)
. .+=+..-+..+++.|+..+--+.+++
T Consensus 77 ~--~~~~~~~n~~~~~~a~~~~~~~~iia 103 (140)
T 3fwz_A 77 L--TIPNGYEAGEIVASARAKNPDIEIIA 103 (140)
T ss_dssp E--CCSCHHHHHHHHHHHHHHCSSSEEEE
T ss_pred E--ECCChHHHHHHHHHHHHHCCCCeEEE
No 289
>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A
Probab=42.75 E-value=86 Score=27.92 Aligned_cols=107 Identities=13% Similarity=0.134 Sum_probs=59.6
Q ss_pred cCcEEEeccChHHHHHHHHHH-HHcCCceEEEEecCCCCcchHHHHHHHHhCCCceEEE-cch----HHHHHh-------
Q 045642 199 QNEVILTLGHSKFVKEFLCAA-KEKKRSFEVFIADGAPKFEGHILAKELDKKGLKAIVI-TDS----AVFAMI------- 265 (406)
Q Consensus 199 ~g~~ILT~g~S~tV~~~L~~A-~~~~~~f~ViV~EsrP~~eG~~~a~~L~~~GI~vt~I-~Ds----av~~~m------- 265 (406)
.+.+||..|.++.+=..+... .++| .+|+++...+ .....++.+|.+.|..+.++ .|- .+..++
T Consensus 13 ~~k~vlITGasggiG~~la~~l~~~G--~~V~~~~r~~-~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 89 (266)
T 1xq1_A 13 KAKTVLVTGGTKGIGHAIVEEFAGFG--AVIHTCARNE-YELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSSMF 89 (266)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTT--CEEEEEESCH-HHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCC--CEEEEEeCCH-HHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHHh
Confidence 467888888887776655443 3344 5777775432 23345667777777666554 342 233333
Q ss_pred -hcCCEEEEcceeEeeCCCc-------------ccccchHHHHHHH----hhCCCceEEecC
Q 045642 266 -SRVNMVIVGVHAVMANGGV-------------IAPAGLHVLALAA----KKHDVPFVVVAS 309 (406)
Q Consensus 266 -~~vd~VllGAdav~~nG~v-------------vnk~GT~~lAl~A----k~~~vPv~V~ae 309 (406)
.++|.||--|-. ...+.+ +|-.|+..+..++ +..+..-+|...
T Consensus 90 ~~~id~li~~Ag~-~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~is 150 (266)
T 1xq1_A 90 GGKLDILINNLGA-IRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASGCGNIIFMS 150 (266)
T ss_dssp TTCCSEEEEECCC-------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCEEEEEC
T ss_pred CCCCcEEEECCCC-CCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEc
Confidence 467888776532 222221 4667888877766 344545444433
No 290
>3h5i_A Response regulator/sensory box protein/ggdef domain protein; structural genomics, transcription, PSI-2; 1.90A {Carboxydothermus hydrogenoformans z-2901}
Probab=42.51 E-value=1e+02 Score=24.01 Aligned_cols=79 Identities=11% Similarity=0.267 Sum_probs=48.5
Q ss_pred ceEEEEecCCCCcchHHHHHHHHhCCCceEEEcchHHH--HHhh--cCCEEEEcceeEeeCCCcccccchHHHHHHHhhC
Q 045642 225 SFEVFIADGAPKFEGHILAKELDKKGLKAIVITDSAVF--AMIS--RVNMVIVGVHAVMANGGVIAPAGLHVLALAAKKH 300 (406)
Q Consensus 225 ~f~ViV~EsrP~~eG~~~a~~L~~~GI~vt~I~Dsav~--~~m~--~vd~VllGAdav~~nG~vvnk~GT~~lAl~Ak~~ 300 (406)
+.+|.++|..|.. ...+...|.+.|..|....+..-+ .+-. ..|.||+..+ +++| ..|.-.+..+-+..
T Consensus 5 ~~~ilivdd~~~~-~~~l~~~L~~~g~~v~~~~~~~~a~~~l~~~~~~dlvi~D~~--l~~~----~~g~~~~~~l~~~~ 77 (140)
T 3h5i_A 5 DKKILIVEDSKFQ-AKTIANILNKYGYTVEIALTGEAAVEKVSGGWYPDLILMDIE--LGEG----MDGVQTALAIQQIS 77 (140)
T ss_dssp -CEEEEECSCHHH-HHHHHHHHHHTTCEEEEESSHHHHHHHHHTTCCCSEEEEESS--CSSS----CCHHHHHHHHHHHC
T ss_pred CcEEEEEeCCHHH-HHHHHHHHHHcCCEEEEecChHHHHHHHhcCCCCCEEEEecc--CCCC----CCHHHHHHHHHhCC
Confidence 4578888877643 345667777888888777664332 2222 4788887653 2221 33555555555557
Q ss_pred CCceEEecCC
Q 045642 301 DVPFVVVAST 310 (406)
Q Consensus 301 ~vPv~V~aes 310 (406)
++|+++++..
T Consensus 78 ~~~ii~ls~~ 87 (140)
T 3h5i_A 78 ELPVVFLTAH 87 (140)
T ss_dssp CCCEEEEESS
T ss_pred CCCEEEEECC
Confidence 8999998864
No 291
>3da8_A Probable 5'-phosphoribosylglycinamide formyltransferase PURN; glycinamide ribonucleotide transformylase, structure; 1.30A {Mycobacterium tuberculosis} PDB: 3dcj_A*
Probab=42.50 E-value=53 Score=29.60 Aligned_cols=69 Identities=14% Similarity=0.198 Sum_probs=41.3
Q ss_pred EEeccChHHHHHHHHHHHHcCCceEEEEecCCCCcchHHHHHHHHhCCCceEEEc----------chHHHHHhh--cCCE
Q 045642 203 ILTLGHSKFVKEFLCAAKEKKRSFEVFIADGAPKFEGHILAKELDKKGLKAIVIT----------DSAVFAMIS--RVNM 270 (406)
Q Consensus 203 ILT~g~S~tV~~~L~~A~~~~~~f~ViV~EsrP~~eG~~~a~~L~~~GI~vt~I~----------Dsav~~~m~--~vd~ 270 (406)
||.-|..+....+|.... .+..++|..+-|.|...+... -.++||++..+. |..+...++ ++|.
T Consensus 17 vl~SG~gsnl~all~~~~-~~~~~eI~~Vis~~~a~~~~~---A~~~gIp~~~~~~~~~~~r~~~d~~~~~~l~~~~~Dl 92 (215)
T 3da8_A 17 VLASGTGSLLRSLLDAAV-GDYPARVVAVGVDRECRAAEI---AAEASVPVFTVRLADHPSRDAWDVAITAATAAHEPDL 92 (215)
T ss_dssp EEESSCCHHHHHHHHHSS-TTCSEEEEEEEESSCCHHHHH---HHHTTCCEEECCGGGSSSHHHHHHHHHHHHHTTCCSE
T ss_pred EEEeCChHHHHHHHHHHh-ccCCCeEEEEEeCCchHHHHH---HHHcCCCEEEeCcccccchhhhhHHHHHHHHhhCCCE
Confidence 444466666666665543 334467766666665444333 346799999885 344555554 4788
Q ss_pred EEEcc
Q 045642 271 VIVGV 275 (406)
Q Consensus 271 VllGA 275 (406)
+++.+
T Consensus 93 ivlag 97 (215)
T 3da8_A 93 VVSAG 97 (215)
T ss_dssp EEEEE
T ss_pred EEEcC
Confidence 77754
No 292
>3fdx_A Putative filament protein / universal stress PROT; structural genomics, APC60640.1, universal protein F, PSI-2; HET: MSE ATP; 1.58A {Klebsiella pneumoniae subsp} PDB: 3fh0_A*
Probab=42.35 E-value=1.2e+02 Score=23.72 Aligned_cols=36 Identities=19% Similarity=0.371 Sum_probs=24.9
Q ss_pred cCCEEEEcceeEeeCCCccc-ccchHHHHHHHhhCCCceEEe
Q 045642 267 RVNMVIVGVHAVMANGGVIA-PAGLHVLALAAKKHDVPFVVV 307 (406)
Q Consensus 267 ~vd~VllGAdav~~nG~vvn-k~GT~~lAl~Ak~~~vPv~V~ 307 (406)
++|.+++|++. + ++-. -.|+..-. +.++..+||+|+
T Consensus 106 ~~dliV~G~~~---~-~~~~~~~Gs~~~~-v~~~~~~pVlvv 142 (143)
T 3fdx_A 106 PADLVIIASHR---P-DITTYLLGSNAAA-VVRHAECSVLVV 142 (143)
T ss_dssp TCSEEEEESSC---T-TCCSCSSCHHHHH-HHHHCSSEEEEE
T ss_pred CCCEEEEeCCC---C-CCeeeeeccHHHH-HHHhCCCCEEEe
Confidence 69999999973 2 3333 35765444 456778999986
No 293
>1iay_A ACC synthase 2, 1-aminocyclopropane-1-carboxylate synthase 2; protein-cofactor-inhibitor complex, V6-dependent enzyme, LYA; HET: PLP AVG; 2.70A {Solanum lycopersicum} SCOP: c.67.1.4 PDB: 1iax_A*
Probab=42.18 E-value=1e+02 Score=29.42 Aligned_cols=103 Identities=15% Similarity=0.242 Sum_probs=54.7
Q ss_pred cccCcEEEeccChHHHHHHHHHHHHcCCceEEEEecCCCCcchHHHHHHHH-hCCCceEEEcch----------HHHHHh
Q 045642 197 IHQNEVILTLGHSKFVKEFLCAAKEKKRSFEVFIADGAPKFEGHILAKELD-KKGLKAIVITDS----------AVFAMI 265 (406)
Q Consensus 197 I~~g~~ILT~g~S~tV~~~L~~A~~~~~~f~ViV~EsrP~~eG~~~a~~L~-~~GI~vt~I~Ds----------av~~~m 265 (406)
+....+++|.|.+..+..++..+.+.| -+|++. .|.+.|... .+. ..|+++..++-. ++-..+
T Consensus 106 ~~~~~i~~~~G~~~ai~~~~~~~~~~g--d~Vl~~--~p~y~~~~~--~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l 179 (428)
T 1iay_A 106 FDPERVVMAGGATGANETIIFCLADPG--DAFLVP--SPYYPAFNR--DLRWRTGVQLIPIHCESSNNFKITSKAVKEAY 179 (428)
T ss_dssp CCTTSCEEEEHHHHHHHHHHHHHCCTT--CEEEEE--SSCCTTHHH--HTTTTTCCEEEEECCCTTTTTCCCHHHHHHHH
T ss_pred CChhhEEEccChHHHHHHHHHHhCCCC--CeEEEc--cCCCcchHH--HHHHhcCCEEEEeecCCccCCcCCHHHHHHHH
Confidence 334567888887777766666664333 356665 566666432 132 468888777521 222233
Q ss_pred h-------cCCEEEEcceeEeeCCCcccccchHHHHHHHhhCCCceEE
Q 045642 266 S-------RVNMVIVGVHAVMANGGVIAPAGLHVLALAAKKHDVPFVV 306 (406)
Q Consensus 266 ~-------~vd~VllGAdav~~nG~vvnk~GT~~lAl~Ak~~~vPv~V 306 (406)
. ++..|++ +.---+.|.++.+-=-..++-.|+.+++++++
T Consensus 180 ~~~~~~~~~~~~v~l-~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~ 226 (428)
T 1iay_A 180 ENAQKSNIKVKGLIL-TNPSNPLGTTLDKDTLKSVLSFTNQHNIHLVC 226 (428)
T ss_dssp HHHHHTTCCEEEEEE-ESSCTTTCCCCCHHHHHHHHHHHHTTTCEEEE
T ss_pred HHHHhcCCceEEEEE-cCCCCCCCCcCCHHHHHHHHHHHHHCCeEEEE
Confidence 2 2333443 22111223333322234466678889998876
No 294
>3b46_A Aminotransferase BNA3; kynurenine aminotransferase, LLP, PLP, cytoplasm, mitochondrion, pyridoxal phosphate; HET: LLP; 2.00A {Saccharomyces cerevisiae}
Probab=42.13 E-value=84 Score=30.57 Aligned_cols=52 Identities=21% Similarity=0.271 Sum_probs=33.2
Q ss_pred CcEEEeccChHHHHHHHHHHHHcCCceEEEEecCCCCcchHHHHHHHHhCCCceEEEc
Q 045642 200 NEVILTLGHSKFVKEFLCAAKEKKRSFEVFIADGAPKFEGHILAKELDKKGLKAIVIT 257 (406)
Q Consensus 200 g~~ILT~g~S~tV~~~L~~A~~~~~~f~ViV~EsrP~~eG~~~a~~L~~~GI~vt~I~ 257 (406)
..+++|.|.+..+..++..+.+.| -+|++.+ |.+.+... .+...|..+..++
T Consensus 119 ~~v~~t~G~~~al~~~~~~l~~~g--d~Vlv~~--p~y~~~~~--~~~~~g~~~~~v~ 170 (447)
T 3b46_A 119 ENVTVTTGANEGILSCLMGLLNAG--DEVIVFE--PFFDQYIP--NIELCGGKVVYVP 170 (447)
T ss_dssp GGEEEESHHHHHHHHHHHHHCCTT--CEEEEEE--SCCTTHHH--HHHHTTCEEEEEE
T ss_pred hhEEEeCCHHHHHHHHHHHHcCCC--CEEEEeC--CCchhHHH--HHHHcCCEEEEEe
Confidence 467888887777777777765333 3566665 66766432 3345687776664
No 295
>3if2_A Aminotransferase; YP_265399.1, structura genomics, joint center for structural genomics, JCSG, prote structure initiative, PSI-2; HET: PLP; 2.50A {Psychrobacter arcticus 273-4}
Probab=41.95 E-value=38 Score=32.76 Aligned_cols=122 Identities=14% Similarity=0.164 Sum_probs=60.6
Q ss_pred HHHHHHHHHHHHHh----cccCcEEEeccChHHHHHHHHHHHHcCCc------------eEEEEecCCCCcchHHHH---
Q 045642 183 NTCREGIAEQAMEL----IHQNEVILTLGHSKFVKEFLCAAKEKKRS------------FEVFIADGAPKFEGHILA--- 243 (406)
Q Consensus 183 ~~~~~~I~~~a~~~----I~~g~~ILT~g~S~tV~~~L~~A~~~~~~------------f~ViV~EsrP~~eG~~~a--- 243 (406)
...++.|+++.... +....+++|.|.+..+..++..+.+.|.. -+|++++ .|.+.+...+
T Consensus 86 ~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~t~al~~~~~~l~~~gd~~~~~~~~~~g~~~~vi~~~-~p~~~~~~~~~~~ 164 (444)
T 3if2_A 86 SAFIDALVGFFNRHYDWNLTSENIALTNGSQNAFFYLFNLFGGAFVNEHSQDKESKSVDKSILLPL-TPEYIGYSDVHVE 164 (444)
T ss_dssp HHHHHHHHHHHHHHHCCCCCGGGEEEESSHHHHHHHHHHHSSEEEECC-------CEEEEEEEESS-SSCCGGGTTCCSS
T ss_pred HHHHHHHHHHHHhhcCCCCCHHHEEEecCcHHHHHHHHHHHhCCCccccccccccccccceEEEeC-CCCccchhhcccc
Confidence 34455555544322 34557888877666666666655432220 1466553 3444443211
Q ss_pred -HHHHhCCCceEEEc------------ch-HHHHH----hhcCCEEEEcceeEeeCCCcccccchHHHHHHHhhCCCceE
Q 045642 244 -KELDKKGLKAIVIT------------DS-AVFAM----ISRVNMVIVGVHAVMANGGVIAPAGLHVLALAAKKHDVPFV 305 (406)
Q Consensus 244 -~~L~~~GI~vt~I~------------Ds-av~~~----m~~vd~VllGAdav~~nG~vvnk~GT~~lAl~Ak~~~vPv~ 305 (406)
..+...|..+..++ |- ++-.. -++...|++. ..--+.|.+...---..++-.|++|+++++
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~~l~~~l~~~~~~~~~v~i~-~p~nptG~~~~~~~l~~i~~~a~~~~~~li 243 (444)
T 3if2_A 165 GQHFAAVLPHIDEVTHDGEEGFFKYRVDFEALENLPALKEGRIGAICCS-RPTNPTGNVLTDEEMAHLAEIAKRYDIPLI 243 (444)
T ss_dssp SCCEEECCCEEEEEEETTEEEEEEEECCHHHHHTCHHHHTTCEEEEEEE-SSCTTTCCCCCHHHHHHHHHHHHHTTCCEE
T ss_pred cchhhccCceEEecccccccCccccCCCHHHHHHHHHhcCCCceEEEeC-CCCCCCCCcCCHHHHHHHHHHHHHCCCEEE
Confidence 13456677776655 21 22221 1233344432 111223433333334456677899999888
Q ss_pred E
Q 045642 306 V 306 (406)
Q Consensus 306 V 306 (406)
+
T Consensus 244 ~ 244 (444)
T 3if2_A 244 I 244 (444)
T ss_dssp E
T ss_pred E
Confidence 6
No 296
>3ec7_A Putative dehydrogenase; alpha-beta, structural genomics, PSI-2, protein structure in midwest center for structural genomics, MCSG; HET: MSE NAD EPE; 2.15A {Salmonella typhimurium}
Probab=41.93 E-value=2.3e+02 Score=26.76 Aligned_cols=111 Identities=14% Similarity=0.041 Sum_probs=60.0
Q ss_pred EEEeccChHHHHHHHHHHHHcCCceEEE-EecCCCCcchHHHHHHHHhCCCceEEEcchHHHHHhhcCCEEEEcc-----
Q 045642 202 VILTLGHSKFVKEFLCAAKEKKRSFEVF-IADGAPKFEGHILAKELDKKGLKAIVITDSAVFAMISRVNMVIVGV----- 275 (406)
Q Consensus 202 ~ILT~g~S~tV~~~L~~A~~~~~~f~Vi-V~EsrP~~eG~~~a~~L~~~GI~vt~I~Dsav~~~m~~vd~VllGA----- 275 (406)
.|..+|....-...+....++...++|. |++..|.. ...+++ +.|+.+....|-.-..--+++|.|++..
T Consensus 25 rvgiIG~G~~g~~~~~~l~~~~~~~~lvav~d~~~~~-~~~~a~---~~g~~~~~~~~~~~ll~~~~~D~V~i~tp~~~h 100 (357)
T 3ec7_A 25 KAGIVGIGMIGSDHLRRLANTVSGVEVVAVCDIVAGR-AQAALD---KYAIEAKDYNDYHDLINDKDVEVVIITASNEAH 100 (357)
T ss_dssp EEEEECCSHHHHHHHHHHHHTCTTEEEEEEECSSTTH-HHHHHH---HHTCCCEEESSHHHHHHCTTCCEEEECSCGGGH
T ss_pred eEEEECCcHHHHHHHHHHHhhCCCcEEEEEEeCCHHH-HHHHHH---HhCCCCeeeCCHHHHhcCCCCCEEEEcCCcHHH
Confidence 5777777665555555544244567766 66665542 122232 3466666666644333334688888854
Q ss_pred ------------eeEeeCCCcccccchHHHHHHHhhCCCceEEecCCcccccc
Q 045642 276 ------------HAVMANGGVIAPAGLHVLALAAKKHDVPFVVVASTHELCSL 316 (406)
Q Consensus 276 ------------dav~~nG~vvnk~GT~~lAl~Ak~~~vPv~V~aes~K~~~~ 316 (406)
+.++.-=-..+......+.-+|+..+++++.++-.+.|.|.
T Consensus 101 ~~~~~~al~aGk~Vl~EKPla~~~~e~~~l~~~a~~~g~~~~~v~~~~R~~p~ 153 (357)
T 3ec7_A 101 ADVAVAALNANKYVFCEKPLAVTAADCQRVIEAEQKNGKRMVQIGFMRRYDKG 153 (357)
T ss_dssp HHHHHHHHHTTCEEEEESSSCSSHHHHHHHHHHHHHHTSCCEEEECGGGGSHH
T ss_pred HHHHHHHHHCCCCEEeecCccCCHHHHHHHHHHHHHhCCeEEEEeecccCCHH
Confidence 22222222233334445566677777777555555566553
No 297
>3dr4_A Putative perosamine synthetase; deoxysugar, pyridoxal phosphate, aspartate aminotransferase, O-antigen; HET: G4M; 1.60A {Caulobacter crescentus} PDB: 3dr7_A* 3bn1_A*
Probab=41.87 E-value=1.2e+02 Score=28.41 Aligned_cols=96 Identities=13% Similarity=0.153 Sum_probs=54.2
Q ss_pred HhcccCcEEEeccChHHHHHHHHHH-HHcCCceEEEEecCCCCcchHHHHHHHHhCCCceEEEcch---------HHHHH
Q 045642 195 ELIHQNEVILTLGHSKFVKEFLCAA-KEKKRSFEVFIADGAPKFEGHILAKELDKKGLKAIVITDS---------AVFAM 264 (406)
Q Consensus 195 ~~I~~g~~ILT~g~S~tV~~~L~~A-~~~~~~f~ViV~EsrP~~eG~~~a~~L~~~GI~vt~I~Ds---------av~~~ 264 (406)
+++.....|+|-|.+..+..+|..+ .+.| -+|++. .|.+.+.. ..+...|..+..++-. .+-..
T Consensus 67 ~~~~~~~~i~~~~gt~al~~~l~~~~~~~g--d~vl~~--~~~~~~~~--~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~ 140 (391)
T 3dr4_A 67 DYCGVKHAIACNNGTTALHLALVAMGIGPG--DEVIVP--SLTYIASA--NSVTYCGATPVLVDNDPRTFNLDAAKLEAL 140 (391)
T ss_dssp HHHTCSEEEEESSHHHHHHHHHHHHTCCTT--CEEEEE--SSSCTHHH--HHHHHTTCEEEEECBCTTTCSBCGGGSGGG
T ss_pred HHhCCCcEEEeCCHHHHHHHHHHHcCCCCc--CEEEEC--CCchHHHH--HHHHHCCCEEEEEecCccccCcCHHHHHHh
Confidence 3444447788877777777777766 3223 356654 45666643 2344678888877522 11111
Q ss_pred hhcCCEEEEcceeEeeCCCcccccch----HHHHHHHhhCCCceEE
Q 045642 265 ISRVNMVIVGVHAVMANGGVIAPAGL----HVLALAAKKHDVPFVV 306 (406)
Q Consensus 265 m~~vd~VllGAdav~~nG~vvnk~GT----~~lAl~Ak~~~vPv~V 306 (406)
+..-.++|+ +.|..|. -.++-+|+.+++++++
T Consensus 141 ~~~~~~~v~----------~~n~tG~~~~~~~i~~l~~~~~~~li~ 176 (391)
T 3dr4_A 141 ITPRTKAIM----------PVHLYGQICDMDPILEVARRHNLLVIE 176 (391)
T ss_dssp CCTTEEEEC----------CBCGGGCCCCHHHHHHHHHHTTCEEEE
T ss_pred cCCCceEEE----------EECCCCChhhHHHHHHHHHHcCCEEEE
Confidence 111122222 1234443 4577789999998886
No 298
>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}
Probab=41.86 E-value=22 Score=32.61 Aligned_cols=25 Identities=32% Similarity=0.195 Sum_probs=19.9
Q ss_pred cccchHHHHHHHhhCCCceEEecCC
Q 045642 286 APAGLHVLALAAKKHDVPFVVVAST 310 (406)
Q Consensus 286 nk~GT~~lAl~Ak~~~vPv~V~aes 310 (406)
|-.|+..+.-+|+.++++-+|.+.+
T Consensus 95 n~~~~~~ll~a~~~~~v~~~v~~SS 119 (321)
T 3vps_A 95 NVDSGRHLLALCTSVGVPKVVVGST 119 (321)
T ss_dssp HHHHHHHHHHHHHHHTCCEEEEEEE
T ss_pred HHHHHHHHHHHHHHcCCCeEEEecC
Confidence 5678999999999999776766554
No 299
>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2
Probab=41.84 E-value=37 Score=31.41 Aligned_cols=109 Identities=17% Similarity=0.084 Sum_probs=57.7
Q ss_pred cCcEEEeccChHHHHHHHHHHH-HcCCceEEEEecCCCCcchHHHHHHHH-hCCCceEEEcc----hHHHHHhhc--CCE
Q 045642 199 QNEVILTLGHSKFVKEFLCAAK-EKKRSFEVFIADGAPKFEGHILAKELD-KKGLKAIVITD----SAVFAMISR--VNM 270 (406)
Q Consensus 199 ~g~~ILT~g~S~tV~~~L~~A~-~~~~~f~ViV~EsrP~~eG~~~a~~L~-~~GI~vt~I~D----sav~~~m~~--vd~ 270 (406)
.+.+||+.|.++.+=..|.... ++| .+|+++.-.+........+.+. ..++.+. ..| .++..++.. +|.
T Consensus 13 ~~~~vlVTGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~-~~Dl~d~~~~~~~~~~~~~d~ 89 (335)
T 1rpn_A 13 MTRSALVTGITGQDGAYLAKLLLEKG--YRVHGLVARRSSDTRWRLRELGIEGDIQYE-DGDMADACSVQRAVIKAQPQE 89 (335)
T ss_dssp --CEEEEETTTSHHHHHHHHHHHHTT--CEEEEEECCCSSCCCHHHHHTTCGGGEEEE-ECCTTCHHHHHHHHHHHCCSE
T ss_pred cCCeEEEECCCChHHHHHHHHHHHCC--CeEEEEeCCCccccccchhhccccCceEEE-ECCCCCHHHHHHHHHHcCCCE
Confidence 4678999898887766665443 334 6788776555421111122221 1233222 223 345556664 577
Q ss_pred EEEcceeEeeC---CC-----cccccchHHHHHHHhhCCC-ceEEecCC
Q 045642 271 VIVGVHAVMAN---GG-----VIAPAGLHVLALAAKKHDV-PFVVVAST 310 (406)
Q Consensus 271 VllGAdav~~n---G~-----vvnk~GT~~lAl~Ak~~~v-Pv~V~aes 310 (406)
||--|-..... .. -+|-.||..++-+|+.+++ +-+|.+.+
T Consensus 90 Vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~SS 138 (335)
T 1rpn_A 90 VYNLAAQSFVGASWNQPVTTGVVDGLGVTHLLEAIRQFSPETRFYQAST 138 (335)
T ss_dssp EEECCSCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHCTTSEEEEEEE
T ss_pred EEECccccchhhhhhChHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeC
Confidence 77654321110 00 1456789999999988875 55554443
No 300
>1zod_A DGD, 2,2-dialkylglycine decarboxylase; pyridoxal, cesium, lyase; HET: MES PLP; 1.80A {Burkholderia cepacia} SCOP: c.67.1.4 PDB: 1dka_A* 1m0o_A* 1m0p_A* 1m0n_A* 1zc9_A* 1zob_A* 1m0q_A* 2dkb_A* 1dgd_A* 1dge_A* 1d7u_A* 1d7s_A* 1d7r_A* 1d7v_A* 1z3z_A*
Probab=41.81 E-value=1.6e+02 Score=28.14 Aligned_cols=72 Identities=13% Similarity=0.109 Sum_probs=37.5
Q ss_pred HHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHhcc--cCcEEEeccChHHHHHHHHHHHH-cCCceEEEEecCCCCc
Q 045642 165 KKLKSELIKAVNELI----EDINTCREGIAEQAMELIH--QNEVILTLGHSKFVKEFLCAAKE-KKRSFEVFIADGAPKF 237 (406)
Q Consensus 165 ~~~k~~l~~~i~~~~----~e~~~~~~~I~~~a~~~I~--~g~~ILT~g~S~tV~~~L~~A~~-~~~~f~ViV~EsrP~~ 237 (406)
+++++.+.+.++... .-.......+.+..++++. ...+++|.|.+..+..+++.+.. .++ -+|++.+ |.+
T Consensus 62 p~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~~v~~~~gg~ea~~~a~~~~~~~~~~-~~vi~~~--~~y 138 (433)
T 1zod_A 62 PEIVSVIGEYAGKLDHLFSEMLSRPVVDLATRLANITPPGLDRALLLSTGAESNEAAIRMAKLVTGK-YEIVGFA--QSW 138 (433)
T ss_dssp HHHHHHHHHHHHHCCCCCTTCCCHHHHHHHHHHHHHSCTTCCEEEEESCHHHHHHHHHHHHHHHHTC-CEEEEET--TCC
T ss_pred HHHHHHHHHHHHhCcccccccCCHHHHHHHHHHHHhCCCCcCEEEEeCchHHHHHHHHHHHHHhhCC-CeEEEEC--CCc
Confidence 456666666655421 0001112233333334443 34577888888888888876542 343 3566664 555
Q ss_pred ch
Q 045642 238 EG 239 (406)
Q Consensus 238 eG 239 (406)
.|
T Consensus 139 hg 140 (433)
T 1zod_A 139 HG 140 (433)
T ss_dssp CC
T ss_pred CC
Confidence 55
No 301
>7aat_A Aspartate aminotransferase; transferase(aminotransferase); HET: PLP; 1.90A {Gallus gallus} SCOP: c.67.1.1 PDB: 1ivr_A* 1map_A* 1maq_A* 1oxo_A* 1oxp_A* 1ama_A* 1tas_A* 1tat_A* 1tar_A* 8aat_A* 9aat_A* 1aka_A* 1akb_A* 1akc_A* 3pd6_A* 3hlm_A* 3pdb_A*
Probab=41.78 E-value=1.3e+02 Score=28.25 Aligned_cols=97 Identities=15% Similarity=0.223 Sum_probs=50.3
Q ss_pred cCcEEE--eccChHHHHHHHHHHHH-cCCceEEEEecCCCCcchHHHHHHHHhCCCceEEEcc----h------HHHHHh
Q 045642 199 QNEVIL--TLGHSKFVKEFLCAAKE-KKRSFEVFIADGAPKFEGHILAKELDKKGLKAIVITD----S------AVFAMI 265 (406)
Q Consensus 199 ~g~~IL--T~g~S~tV~~~L~~A~~-~~~~f~ViV~EsrP~~eG~~~a~~L~~~GI~vt~I~D----s------av~~~m 265 (406)
...+++ |.|.+..+..++..... .+..-+|++.+ |.+.+.. ..+...|.++..++- . .+...+
T Consensus 94 ~~~i~~v~t~G~~~al~~~~~~l~~~~~~gd~Vlv~~--p~~~~~~--~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l 169 (401)
T 7aat_A 94 SGRYVTVQGISGTGSLRVGANFLQRFFKFSRDVYLPK--PSWGNHT--PIFRDAGLQLQAYRYYDPKTCSLDFTGAMEDI 169 (401)
T ss_dssp TTCEEEEEEEHHHHHHHHHHHHHHHHCTTCCEEEEEE--SCCTTHH--HHHHHTTCEEEEEECEETTTTEECHHHHHHHH
T ss_pred cCceEEEecCcchHHHHHHHHHHHHhccCCCEEEEcC--CCchhHH--HHHHHcCCeeEeeeeeccccCccCHHHHHHHH
Confidence 455655 77777666655544331 12223556553 6666643 234456888777751 1 122233
Q ss_pred hcC---CEEEEcceeEeeCCCcccccc-------hHHHHHHHhhCCCceEE
Q 045642 266 SRV---NMVIVGVHAVMANGGVIAPAG-------LHVLALAAKKHDVPFVV 306 (406)
Q Consensus 266 ~~v---d~VllGAdav~~nG~vvnk~G-------T~~lAl~Ak~~~vPv~V 306 (406)
.+. +++++=+ ..-|.+| -..++-.|+.|++.+++
T Consensus 170 ~~~~~~~~~v~i~-------~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~ 213 (401)
T 7aat_A 170 SKIPEKSIILLHA-------CAHNPTGVDPRQEQWKELASVVKKRNLLAYF 213 (401)
T ss_dssp TTSCTTCEEEEES-------SSCTTTCCCCCHHHHHHHHHHHHHTTCEEEE
T ss_pred HhCCCCcEEEEeC-------CCCCCCCCCCCHHHHHHHHHHHHhCCcEEEE
Confidence 321 2222211 2345666 34577788999987775
No 302
>3gk7_A 4-hydroxybutyrate COA-transferase; alpha/beta protein; HET: SPD; 1.85A {Clostridium aminobutyricum} PDB: 3qdq_A*
Probab=41.76 E-value=56 Score=32.88 Aligned_cols=97 Identities=15% Similarity=0.096 Sum_probs=57.9
Q ss_pred HHHHHHhcccCcEEEeccCh---HHHHHHHHHHHHcCCceEEEEecC-CC----------------CcchHHHHHHHHhC
Q 045642 190 AEQAMELIHQNEVILTLGHS---KFVKEFLCAAKEKKRSFEVFIADG-AP----------------KFEGHILAKELDKK 249 (406)
Q Consensus 190 ~~~a~~~I~~g~~ILT~g~S---~tV~~~L~~A~~~~~~f~ViV~Es-rP----------------~~eG~~~a~~L~~~ 249 (406)
++.|+++|++|++|-..+.. ..|.+.|.+..++-++++++-.-+ .| .+-|..+.+...+-
T Consensus 14 aeeA~~~ik~G~~v~~~~~~~~p~~l~~al~~~~~~l~~v~l~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~r~~i~~G 93 (448)
T 3gk7_A 14 ADEAVKSIKSGDRVLFAHCVAEPPVLVEAMVANAAAYKNVTVSHMVTLGKGEYSKPEYKENFTFEGWFTSPSTRGSIAEG 93 (448)
T ss_dssp HHHHGGGCCTTCEEEECSGGGCCHHHHHHHHHTGGGCSSEEEEESSCSSCCGGGSGGGTTTEEEEESSCCTTTHHHHHHT
T ss_pred HHHHHHhCCCcCEEEECCCCCCHHHHHHHHHHHHHhhcCeEEEEeeccCCccccChHHhCcEEEecCcCCHHHHhHHhCC
Confidence 35567799999999986544 445555544333445677775411 11 12232333333332
Q ss_pred CCceEEEcchHHHHHhh----cCCEEEEcceeEeeCCCccc
Q 045642 250 GLKAIVITDSAVFAMIS----RVNMVIVGVHAVMANGGVIA 286 (406)
Q Consensus 250 GI~vt~I~Dsav~~~m~----~vd~VllGAdav~~nG~vvn 286 (406)
.++.+-+.-+.+..++. ++|.+++.+...-.+|.+.-
T Consensus 94 ~~~~~p~~ls~~p~~~~~g~~~~DVAli~as~~D~~Gn~s~ 134 (448)
T 3gk7_A 94 HGQFVPVFFHEVPSLIRKDIFHVDVFMVMVSPPDHNGFCCV 134 (448)
T ss_dssp SSEECCCCGGGHHHHHHTTTTCCSEEEEEECCCCTTSEEEC
T ss_pred CeeEECchHHhHHHHHHhCCCCCCEEEEEEecCCCCCcEEe
Confidence 23333344466766665 48999999999988888763
No 303
>3ffh_A Histidinol-phosphate aminotransferase; APC88260, listeria in CLIP11262, structural genomics, PSI-2; 2.31A {Listeria innocua} SCOP: c.67.1.0
Probab=41.68 E-value=67 Score=29.85 Aligned_cols=53 Identities=17% Similarity=0.246 Sum_probs=32.6
Q ss_pred cCcEEEeccChHHHHHHHHHHHHcCCceEEEEecCCCCcchHHHHHHHHhCCCceEEEc
Q 045642 199 QNEVILTLGHSKFVKEFLCAAKEKKRSFEVFIADGAPKFEGHILAKELDKKGLKAIVIT 257 (406)
Q Consensus 199 ~g~~ILT~g~S~tV~~~L~~A~~~~~~f~ViV~EsrP~~eG~~~a~~L~~~GI~vt~I~ 257 (406)
...+++|-|.+..+..++....+.| -+|++.+ |.+.+. ...+...|+++..++
T Consensus 84 ~~~v~~~~g~t~a~~~~~~~~~~~g--d~vl~~~--~~~~~~--~~~~~~~g~~~~~v~ 136 (363)
T 3ffh_A 84 EEELIFTAGVDELIELLTRVLLDTT--TNTVMAT--PTFVQY--RQNALIEGAEVREIP 136 (363)
T ss_dssp GGGEEEESSHHHHHHHHHHHHCSTT--CEEEEEE--SSCHHH--HHHHHHHTCEEEEEE
T ss_pred hhhEEEeCCHHHHHHHHHHHHccCC--CEEEEcC--CChHHH--HHHHHHcCCEEEEec
Confidence 4467777777767666666654333 3566654 666553 334455688888775
No 304
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=41.62 E-value=1.4e+02 Score=26.58 Aligned_cols=108 Identities=14% Similarity=0.096 Sum_probs=62.7
Q ss_pred cCcEEEeccChHHHHHHHHHH-HHcCCceEEEEecCCCCcchHHHHHHHHhCCCceEEE-cch----HHHHHhh------
Q 045642 199 QNEVILTLGHSKFVKEFLCAA-KEKKRSFEVFIADGAPKFEGHILAKELDKKGLKAIVI-TDS----AVFAMIS------ 266 (406)
Q Consensus 199 ~g~~ILT~g~S~tV~~~L~~A-~~~~~~f~ViV~EsrP~~eG~~~a~~L~~~GI~vt~I-~Ds----av~~~m~------ 266 (406)
.|.+||..|.|+.+=..+... .++| .+|+++... ......+.++|.+.|-.+.++ .|- ++..++.
T Consensus 28 ~~k~vlITGas~gIG~~la~~l~~~G--~~V~~~~r~-~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~ 104 (262)
T 3rkr_A 28 SGQVAVVTGASRGIGAAIARKLGSLG--ARVVLTARD-VEKLRAVEREIVAAGGEAESHACDLSHSDAIAAFATGVLAAH 104 (262)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTT--CEEEEEESC-HHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCC--CEEEEEECC-HHHHHHHHHHHHHhCCceeEEEecCCCHHHHHHHHHHHHHhc
Confidence 467888888888777666444 3344 567777433 333457778888888777665 332 3333333
Q ss_pred -cCCEEEEcceeEeeCCCc-------------ccccchHHHHHHHhh----CCCceEEecC
Q 045642 267 -RVNMVIVGVHAVMANGGV-------------IAPAGLHVLALAAKK----HDVPFVVVAS 309 (406)
Q Consensus 267 -~vd~VllGAdav~~nG~v-------------vnk~GT~~lAl~Ak~----~~vPv~V~ae 309 (406)
++|.||-.|-.....|.+ +|-.|+..++.++.. .+.+.+|...
T Consensus 105 g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~is 165 (262)
T 3rkr_A 105 GRCDVLVNNAGVGWFGGPLHTMKPAEWDALIAVNLKAPYLLLRAFAPAMIAAKRGHIINIS 165 (262)
T ss_dssp SCCSEEEECCCCCCCSSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCEEEEEC
T ss_pred CCCCEEEECCCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCceEEEEe
Confidence 478888766432222222 355677777665432 3445555433
No 305
>3i42_A Response regulator receiver domain protein (CHEY- like); structural genomics, PSI-2, protein structure initiative; 2.15A {Methylobacillus flagellatus KT} SCOP: c.23.1.0
Probab=41.57 E-value=81 Score=23.99 Aligned_cols=77 Identities=13% Similarity=0.201 Sum_probs=45.2
Q ss_pred eEEEEecCCCCcchHHHHHHHHhCCCceEEEcchHHHH-Hh--hcCCEEEEcceeEeeCCCcccccchHHHHHHHh---h
Q 045642 226 FEVFIADGAPKFEGHILAKELDKKGLKAIVITDSAVFA-MI--SRVNMVIVGVHAVMANGGVIAPAGLHVLALAAK---K 299 (406)
Q Consensus 226 f~ViV~EsrP~~eG~~~a~~L~~~GI~vt~I~Dsav~~-~m--~~vd~VllGAdav~~nG~vvnk~GT~~lAl~Ak---~ 299 (406)
.+|.|+|..|.. ...+...|.+.|..|....+..-+. .+ ...|.||+..+- . ..-|--.+..+-+ .
T Consensus 4 ~~ilivdd~~~~-~~~l~~~L~~~g~~v~~~~~~~~a~~~l~~~~~dlii~D~~l--~-----~~~g~~~~~~l~~~~~~ 75 (127)
T 3i42_A 4 QQALIVEDYQAA-AETFKELLEMLGFQADYVMSGTDALHAMSTRGYDAVFIDLNL--P-----DTSGLALVKQLRALPME 75 (127)
T ss_dssp EEEEEECSCHHH-HHHHHHHHHHTTEEEEEESSHHHHHHHHHHSCCSEEEEESBC--S-----SSBHHHHHHHHHHSCCS
T ss_pred ceEEEEcCCHHH-HHHHHHHHHHcCCCEEEECCHHHHHHHHHhcCCCEEEEeCCC--C-----CCCHHHHHHHHHhhhcc
Confidence 567777776542 3355666777788777766643322 22 247888876542 2 2234444444444 3
Q ss_pred CCCceEEecCC
Q 045642 300 HDVPFVVVAST 310 (406)
Q Consensus 300 ~~vPv~V~aes 310 (406)
.++|+++++..
T Consensus 76 ~~~~ii~~s~~ 86 (127)
T 3i42_A 76 KTSKFVAVSGF 86 (127)
T ss_dssp SCCEEEEEECC
T ss_pred CCCCEEEEECC
Confidence 57999998754
No 306
>3ez1_A Aminotransferase MOCR family; YP_604413.1, struct genomics, joint center for structural genomics, JCSG; 2.60A {Deinococcus geothermalis dsm 11300}
Probab=41.32 E-value=90 Score=29.75 Aligned_cols=106 Identities=16% Similarity=0.205 Sum_probs=53.1
Q ss_pred cccCcEEEeccChHHHH--HHHHHHHH--cCC-------ceEEEEecCCCCcchHHHHHHHHhCCCceEEEc------c-
Q 045642 197 IHQNEVILTLGHSKFVK--EFLCAAKE--KKR-------SFEVFIADGAPKFEGHILAKELDKKGLKAIVIT------D- 258 (406)
Q Consensus 197 I~~g~~ILT~g~S~tV~--~~L~~A~~--~~~-------~f~ViV~EsrP~~eG~~~a~~L~~~GI~vt~I~------D- 258 (406)
+....+++|.|.+..+. .++..... .|. .-+|++. .|.+.+... .+...|..+..++ |
T Consensus 85 ~~~~~i~~t~G~~~al~~~~~~~~l~~~~~g~~~~~~~~gd~Vlv~--~p~y~~~~~--~~~~~g~~~~~v~~~~~g~d~ 160 (423)
T 3ez1_A 85 VKAENVLVWNNSSLELQGLVLTFALLHGVRGSTGPWLSQTPKMIVT--VPGYDRHFL--LLQTLGFELLTVDMQSDGPDV 160 (423)
T ss_dssp SCGGGEEECSSCHHHHHHHHHHHHHHTCCTTCSSCGGGGCCEEEEE--ESCCHHHHH--HHHHHTCEEEEEEEETTEECH
T ss_pred CChhhEEEeCCcHHHHHHHHHHHHHhccCCCccccccCCCCEEEEc--CCCcHHHHH--HHHHcCCEEEeccCCCCCCCH
Confidence 34457888888877775 45554443 221 2456654 366766433 2445577776653 2
Q ss_pred hHHHHHhh---cCCEEEEcceeEeeCCCcccccchHHHHHHH-hhCCCceEE
Q 045642 259 SAVFAMIS---RVNMVIVGVHAVMANGGVIAPAGLHVLALAA-KKHDVPFVV 306 (406)
Q Consensus 259 sav~~~m~---~vd~VllGAdav~~nG~vvnk~GT~~lAl~A-k~~~vPv~V 306 (406)
.++-..+. ++..|++-...=-+.|.++..---..++-+| +++++++++
T Consensus 161 ~~l~~~l~~~~~~~~v~~~~~~~NPtG~~~~~~~l~~l~~~a~~~~~~~li~ 212 (423)
T 3ez1_A 161 DAVERLAGTDPSVKGILFVPTYSNPGGETISLEKARRLAGLQAAAPDFTIFA 212 (423)
T ss_dssp HHHHHHHHSCTTEEEEEECSSSCTTTCCCCCHHHHHHHHTCCCSSTTCEEEE
T ss_pred HHHHHHHhhCCCceEEEECCCCCCCCCcCCCHHHHHHHHHHHHhccCCEEEE
Confidence 23444442 3333322211112223333322223555566 888887765
No 307
>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}
Probab=41.11 E-value=62 Score=32.57 Aligned_cols=98 Identities=12% Similarity=0.023 Sum_probs=55.0
Q ss_pred CcEEEeccChHHHHHHHHHHHHcCCceEEEEecCCCCcchHHHHHHHHhCCCceEEEcchHHHHHhhcCCEEEEcceeEe
Q 045642 200 NEVILTLGHSKFVKEFLCAAKEKKRSFEVFIADGAPKFEGHILAKELDKKGLKAIVITDSAVFAMISRVNMVIVGVHAVM 279 (406)
Q Consensus 200 g~~ILT~g~S~tV~~~L~~A~~~~~~f~ViV~EsrP~~eG~~~a~~L~~~GI~vt~I~Dsav~~~m~~vd~VllGAdav~ 279 (406)
+.+||+.|.++.+=..|..+..+ +..+|+++.-.+.... . +..-.+......+.++|.||--|-...
T Consensus 147 ~m~VLVTGatG~IG~~l~~~L~~-~G~~V~~l~R~~~~~~----------~--v~~d~~~~~~~~l~~~D~Vih~A~~~~ 213 (516)
T 3oh8_A 147 PLTVAITGSRGLVGRALTAQLQT-GGHEVIQLVRKEPKPG----------K--RFWDPLNPASDLLDGADVLVHLAGEPI 213 (516)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHH-TTCEEEEEESSSCCTT----------C--EECCTTSCCTTTTTTCSEEEECCCC--
T ss_pred CCEEEEECCCCHHHHHHHHHHHH-CCCEEEEEECCCCCcc----------c--eeecccchhHHhcCCCCEEEECCCCcc
Confidence 66899999888777766554422 2467887765554211 0 111111122334567777776443221
Q ss_pred eC----CC-----cccccchHHHHHH-HhhCCCceEEecCC
Q 045642 280 AN----GG-----VIAPAGLHVLALA-AKKHDVPFVVVAST 310 (406)
Q Consensus 280 ~n----G~-----vvnk~GT~~lAl~-Ak~~~vPv~V~aes 310 (406)
.+ .. -+|-.||..++-+ |+..+++.+|.+.+
T Consensus 214 ~~~~~~~~~~~~~~~Nv~gt~~ll~a~a~~~~~~r~V~~SS 254 (516)
T 3oh8_A 214 FGRFNDSHKEAIRESRVLPTKFLAELVAESTQCTTMISASA 254 (516)
T ss_dssp ---CCGGGHHHHHHHTHHHHHHHHHHHHHCSSCCEEEEEEE
T ss_pred ccccchhHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEeCc
Confidence 11 00 1367789998887 78888877776555
No 308
>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2
Probab=40.88 E-value=36 Score=30.48 Aligned_cols=99 Identities=20% Similarity=0.255 Sum_probs=56.6
Q ss_pred cCcEEEeccChHHHHHHHHHH-HHcCCceEEEEecCCCCcchHHHHHHHHhCCCceEEE-cc----hHHHHHhh------
Q 045642 199 QNEVILTLGHSKFVKEFLCAA-KEKKRSFEVFIADGAPKFEGHILAKELDKKGLKAIVI-TD----SAVFAMIS------ 266 (406)
Q Consensus 199 ~g~~ILT~g~S~tV~~~L~~A-~~~~~~f~ViV~EsrP~~eG~~~a~~L~~~GI~vt~I-~D----sav~~~m~------ 266 (406)
.+.+||..|.++.+=..+... .++| .+|+++..+.......+.++|.+.|.++.++ .| ..+..++.
T Consensus 20 ~~k~vlItGasggiG~~la~~l~~~G--~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 97 (274)
T 1ja9_A 20 AGKVALTTGAGRGIGRGIAIELGRRG--ASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVSHF 97 (274)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTT--CEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCC--CEEEEEcCCchHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHc
Confidence 466888888887776655443 4344 5777775533333345677787778776655 34 24444444
Q ss_pred -cCCEEEEcceeEeeCCC-------------cccccchHHHHHHHhhC
Q 045642 267 -RVNMVIVGVHAVMANGG-------------VIAPAGLHVLALAAKKH 300 (406)
Q Consensus 267 -~vd~VllGAdav~~nG~-------------vvnk~GT~~lAl~Ak~~ 300 (406)
++|.||-.|-. ...+. -+|-.|+..++.++..+
T Consensus 98 ~~~d~vi~~Ag~-~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~ 144 (274)
T 1ja9_A 98 GGLDFVMSNSGM-EVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKH 144 (274)
T ss_dssp SCEEEEECCCCC-CCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred CCCCEEEECCCC-CCCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 56666654421 11111 13567888777666543
No 309
>1vef_A Acetylornithine/acetyl-lysine aminotransferase; PLP, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: PLP; 1.35A {Thermus thermophilus} SCOP: c.67.1.4 PDB: 1wkg_A* 1wkh_A*
Probab=40.82 E-value=1.8e+02 Score=27.18 Aligned_cols=135 Identities=13% Similarity=0.134 Sum_probs=64.9
Q ss_pred HHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHhc--ccCcEEEeccChHHHHHHHHHHH--HcCCceEEEEecCCCC
Q 045642 165 KKLKSELIKAVNELIE----DINTCREGIAEQAMELI--HQNEVILTLGHSKFVKEFLCAAK--EKKRSFEVFIADGAPK 236 (406)
Q Consensus 165 ~~~k~~l~~~i~~~~~----e~~~~~~~I~~~a~~~I--~~g~~ILT~g~S~tV~~~L~~A~--~~~~~f~ViV~EsrP~ 236 (406)
+.+++.+.+.++.... ......+.+.+..++++ ....+++|.|.+..+..+++.+. ..+ -+|++.+ |.
T Consensus 64 ~~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~~v~~~~gg~~a~~~al~~~~~~~~~--~~vi~~~--~~ 139 (395)
T 1vef_A 64 PEVVEAVKRQAETLMAMPQTLPTPMRGEFYRTLTAILPPELNRVFPVNSGTEANEAALKFARAHTGR--KKFVAAM--RG 139 (395)
T ss_dssp HHHHHHHHHHHHHCCCCCTTSCCHHHHHHHHHHHHTSCTTEEEEEEESSHHHHHHHHHHHHHHHHSC--CEEEEET--TC
T ss_pred HHHHHHHHHHHHhCCCCccccCCHHHHHHHHHHHHhcCCCcCEEEEcCcHHHHHHHHHHHHHHHhCC--CeEEEEc--CC
Confidence 4556666666554210 01122334444444556 44457777777777777776552 233 3567664 33
Q ss_pred cchH-HHHHHHHhCCCc------------eEEEc--c-hHHHHHhhcCCEEEEcceeEeeCCC-cccccc-hHHHHHHHh
Q 045642 237 FEGH-ILAKELDKKGLK------------AIVIT--D-SAVFAMISRVNMVIVGVHAVMANGG-VIAPAG-LHVLALAAK 298 (406)
Q Consensus 237 ~eG~-~~a~~L~~~GI~------------vt~I~--D-sav~~~m~~vd~VllGAdav~~nG~-vvnk~G-T~~lAl~Ak 298 (406)
+.|. ..+..+ .|.+ +..++ | ..+-..+..-.++|+ ...+..+.| ++..-+ -..++-+|+
T Consensus 140 y~~~~~~~~~~--~g~~~~~~~~~p~~~~~~~~~~~d~~~l~~~i~~~~~~v~-~~~~~~~tG~~~~~~~~l~~i~~l~~ 216 (395)
T 1vef_A 140 FSGRTMGSLSV--TWEPKYREPFLPLVEPVEFIPYNDVEALKRAVDEETAAVI-LEPVQGEGGVRPATPEFLRAAREITQ 216 (395)
T ss_dssp CCCSSHHHHHT--CCCHHHHGGGCSCSSCEEEECTTCHHHHHHHCCTTEEEEE-ECSEETTTTSEECCHHHHHHHHHHHH
T ss_pred cCCCchhhhhh--cCCcccccccCCCCCCeeEeCCCcHHHHHHHhccCEEEEE-EeCccCCCCccCCCHHHHHHHHHHHH
Confidence 3331 112122 2322 43332 3 223333332234444 334443333 333333 345777899
Q ss_pred hCCCceEE
Q 045642 299 KHDVPFVV 306 (406)
Q Consensus 299 ~~~vPv~V 306 (406)
+|++++++
T Consensus 217 ~~~~~li~ 224 (395)
T 1vef_A 217 EKGALLIL 224 (395)
T ss_dssp HHTCEEEE
T ss_pred HcCCEEEE
Confidence 99998876
No 310
>3e2y_A Kynurenine-oxoglutarate transaminase 3; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: GLN PMP; 2.26A {Mus musculus} SCOP: c.67.1.0 PDB: 2zjg_A* 3e2f_A* 3e2z_A*
Probab=40.81 E-value=94 Score=29.30 Aligned_cols=100 Identities=18% Similarity=0.200 Sum_probs=52.7
Q ss_pred CcEEEeccChHHHHHHHHHHHHcCCceEEEEecCCCCcchHHHHHHHHhCCCceEEEcch----------------HHHH
Q 045642 200 NEVILTLGHSKFVKEFLCAAKEKKRSFEVFIADGAPKFEGHILAKELDKKGLKAIVITDS----------------AVFA 263 (406)
Q Consensus 200 g~~ILT~g~S~tV~~~L~~A~~~~~~f~ViV~EsrP~~eG~~~a~~L~~~GI~vt~I~Ds----------------av~~ 263 (406)
..+++|.|.+..+..++..+.+.| -+|++. .|.+.+.. ..+...|..+..++-. -+..
T Consensus 86 ~~i~~~~g~~~a~~~~~~~~~~~g--d~vl~~--~p~~~~~~--~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~~~d~~~ 159 (410)
T 3e2y_A 86 EEILVAVGAYGSLFNSIQGLVDPG--DEVIIM--VPFYDCYE--PMVRMAGAVPVFIPLRSKPTDGMKWTSSDWTFDPRE 159 (410)
T ss_dssp TSEEEESHHHHHHHHHHHHHCCTT--CEEEEE--ESCCTTHH--HHHHHTTCEEEEEECEECCCCSSCCBGGGEECCHHH
T ss_pred CCEEEeCCcHHHHHHHHHHhcCCC--CEEEEe--CCCchhhH--HHHHHcCCEEEEEeccccccccccccccCCcCCHHH
Confidence 568888887777777777765333 355554 45555532 2344568776665421 1122
Q ss_pred H---h-hcCCEEEEcceeEeeCCCcccccchHHHHHHHhhCCCceEE
Q 045642 264 M---I-SRVNMVIVGVHAVMANGGVIAPAGLHVLALAAKKHDVPFVV 306 (406)
Q Consensus 264 ~---m-~~vd~VllGAdav~~nG~vvnk~GT~~lAl~Ak~~~vPv~V 306 (406)
+ + +++..|++. ..--+.|.++.+---..++-+|+.+++++++
T Consensus 160 l~~~~~~~~~~v~~~-~p~nptG~~~~~~~l~~l~~~~~~~~~~li~ 205 (410)
T 3e2y_A 160 LESKFSSKTKAIILN-TPHNPLGKVYTRQELQVIADLCVKHDTLCIS 205 (410)
T ss_dssp HHTTCCTTEEEEEEE-SSCTTTCCCCCHHHHHHHHHHHHHHTCEEEE
T ss_pred HHhhcCCCceEEEEe-CCCCCCCcCcCHHHHHHHHHHHHHcCcEEEE
Confidence 2 2 123333332 1111223333322333566788999998886
No 311
>3eod_A Protein HNR; response regulator, phosphoprotein, two-component regulatory system, signaling protein; 1.75A {Escherichia coli K12}
Probab=40.77 E-value=1.2e+02 Score=23.11 Aligned_cols=79 Identities=15% Similarity=0.317 Sum_probs=45.3
Q ss_pred CceEEEEecCCCCcchHHHHHHHHhCCCceEEEcchHHHH-Hhh--cCCEEEEcceeEeeCCCcccccchHHHHHHHh-h
Q 045642 224 RSFEVFIADGAPKFEGHILAKELDKKGLKAIVITDSAVFA-MIS--RVNMVIVGVHAVMANGGVIAPAGLHVLALAAK-K 299 (406)
Q Consensus 224 ~~f~ViV~EsrP~~eG~~~a~~L~~~GI~vt~I~Dsav~~-~m~--~vd~VllGAdav~~nG~vvnk~GT~~lAl~Ak-~ 299 (406)
.+.+|.++|..|.. ...+...|.+.|..+....+..-+. .+. +.|.||+..+- .+ ..|--.+..+-+ .
T Consensus 6 ~~~~ilivdd~~~~-~~~l~~~L~~~g~~v~~~~~~~~a~~~l~~~~~dlvi~d~~l--~~-----~~g~~~~~~l~~~~ 77 (130)
T 3eod_A 6 VGKQILIVEDEQVF-RSLLDSWFSSLGATTVLAADGVDALELLGGFTPDLMICDIAM--PR-----MNGLKLLEHIRNRG 77 (130)
T ss_dssp TTCEEEEECSCHHH-HHHHHHHHHHTTCEEEEESCHHHHHHHHTTCCCSEEEECCC------------CHHHHHHHHHTT
T ss_pred CCCeEEEEeCCHHH-HHHHHHHHHhCCceEEEeCCHHHHHHHHhcCCCCEEEEecCC--CC-----CCHHHHHHHHHhcC
Confidence 34578888776643 2355667777888887766644322 232 37888887543 22 234444433333 3
Q ss_pred CCCceEEecCC
Q 045642 300 HDVPFVVVAST 310 (406)
Q Consensus 300 ~~vPv~V~aes 310 (406)
..+|+++++..
T Consensus 78 ~~~~ii~~t~~ 88 (130)
T 3eod_A 78 DQTPVLVISAT 88 (130)
T ss_dssp CCCCEEEEECC
T ss_pred CCCCEEEEEcC
Confidence 47999998754
No 312
>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0
Probab=40.59 E-value=62 Score=28.53 Aligned_cols=108 Identities=12% Similarity=0.177 Sum_probs=60.8
Q ss_pred cCcEEEeccChHHHHHHHHHH-HHcCCceEEEEecCCCCcchHHHHHHHHhCC-CceEEE-cc------hHHHHHhh---
Q 045642 199 QNEVILTLGHSKFVKEFLCAA-KEKKRSFEVFIADGAPKFEGHILAKELDKKG-LKAIVI-TD------SAVFAMIS--- 266 (406)
Q Consensus 199 ~g~~ILT~g~S~tV~~~L~~A-~~~~~~f~ViV~EsrP~~eG~~~a~~L~~~G-I~vt~I-~D------sav~~~m~--- 266 (406)
.|.++|..|.|+.+=..+... .++ ..+|+++... ......++.+|.+.| -.+.++ .| ..+..++.
T Consensus 13 ~~k~vlITGas~gIG~~ia~~l~~~--G~~V~~~~r~-~~~~~~~~~~~~~~~~~~~~~~~~d~d~~~~~~~~~~~~~~~ 89 (247)
T 3i1j_A 13 KGRVILVTGAARGIGAAAARAYAAH--GASVVLLGRT-EASLAEVSDQIKSAGQPQPLIIALNLENATAQQYRELAARVE 89 (247)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHT--TCEEEEEESC-HHHHHHHHHHHHHTTSCCCEEEECCTTTCCHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHC--CCEEEEEecC-HHHHHHHHHHHHhcCCCCceEEEeccccCCHHHHHHHHHHHH
Confidence 467888888888776665444 333 4678877543 233456677777766 333333 22 12333332
Q ss_pred ----cCCEEEEcceeEeeCCCc-------------ccccchHHHHHHH----hhCCCceEEecC
Q 045642 267 ----RVNMVIVGVHAVMANGGV-------------IAPAGLHVLALAA----KKHDVPFVVVAS 309 (406)
Q Consensus 267 ----~vd~VllGAdav~~nG~v-------------vnk~GT~~lAl~A----k~~~vPv~V~ae 309 (406)
++|.+|-.|-.....+.+ +|-.|++.++.++ +..+.+.+|...
T Consensus 90 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~is 153 (247)
T 3i1j_A 90 HEFGRLDGLLHNASIIGPRTPLEQLPDEDFMQVMHVNVNATFMLTRALLPLLKRSEDASIAFTS 153 (247)
T ss_dssp HHHSCCSEEEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSEEEEEEC
T ss_pred HhCCCCCEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCeEEEEc
Confidence 688888766432222221 4677888887766 444555555433
No 313
>3k5i_A Phosphoribosyl-aminoimidazole carboxylase; purine biosynthesis, ATP-grAsp, lyase; HET: NHE ADP AIR; 2.00A {Aspergillus clavatus} PDB: 3k5h_A*
Probab=40.49 E-value=24 Score=34.59 Aligned_cols=78 Identities=13% Similarity=0.146 Sum_probs=46.6
Q ss_pred hcccCcEEEeccChHHHHHHHHHHHHcCCceEEEEecCCCCcchHHHHHHHHhCCCceEEEcchHHHHHhhcCCEEEEcc
Q 045642 196 LIHQNEVILTLGHSKFVKEFLCAAKEKKRSFEVFIADGAPKFEGHILAKELDKKGLKAIVITDSAVFAMISRVNMVIVGV 275 (406)
Q Consensus 196 ~I~~g~~ILT~g~S~tV~~~L~~A~~~~~~f~ViV~EsrP~~eG~~~a~~L~~~GI~vt~I~Dsav~~~m~~vd~VllGA 275 (406)
+..++.+|+..|....-..+.+.|.+.| ++|++++ .|......+|... .-+...+--+.++..+.+++|.++.+.
T Consensus 20 ~mm~~~~I~ilGgG~lg~~l~~aa~~lG--~~v~~~d-~~~~p~~~~ad~~--~~~~~~~~d~~~l~~~a~~~d~i~~e~ 94 (403)
T 3k5i_A 20 HMWNSRKVGVLGGGQLGRMLVESANRLN--IQVNVLD-ADNSPAKQISAHD--GHVTGSFKEREAVRQLAKTCDVVTAEI 94 (403)
T ss_dssp -CCSCCEEEEECCSHHHHHHHHHHHHHT--CEEEEEE-STTCTTGGGCCSS--CCEESCTTCHHHHHHHHTTCSEEEESS
T ss_pred cCCCCCEEEEECCCHHHHHHHHHHHHCC--CEEEEEE-CCCCcHHHhcccc--ceeecCCCCHHHHHHHHHhCCEEEECC
Confidence 4456789999999988888888888655 6777777 5544332222100 001111111245666777888888766
Q ss_pred eeE
Q 045642 276 HAV 278 (406)
Q Consensus 276 dav 278 (406)
+.+
T Consensus 95 e~~ 97 (403)
T 3k5i_A 95 EHV 97 (403)
T ss_dssp SCS
T ss_pred CCC
Confidence 554
No 314
>3q2o_A Phosphoribosylaminoimidazole carboxylase, ATPase; carboxylates, ATP binding, lyase; 1.96A {Bacillus anthracis} PDB: 3qff_A* 3r5h_A*
Probab=40.45 E-value=11 Score=36.65 Aligned_cols=76 Identities=14% Similarity=0.113 Sum_probs=44.8
Q ss_pred hcccCcEEEeccChHHHHHHHHHHHHcCCceEEEEecCCCCcchHHHHHHHHhCCCceEEEcchHHHHHhhcCCEEEEcc
Q 045642 196 LIHQNEVILTLGHSKFVKEFLCAAKEKKRSFEVFIADGAPKFEGHILAKELDKKGLKAIVITDSAVFAMISRVNMVIVGV 275 (406)
Q Consensus 196 ~I~~g~~ILT~g~S~tV~~~L~~A~~~~~~f~ViV~EsrP~~eG~~~a~~L~~~GI~vt~I~Dsav~~~m~~vd~VllGA 275 (406)
.+..|.+|+.+|....-..+.+.|.+.| ++|++++..|...+..+ +..-+...+....++..+.+++|.|..+.
T Consensus 10 ~~~~~k~IlIlG~G~~g~~la~aa~~~G--~~vi~~d~~~~~~~~~~----ad~~~~~~~~d~~~l~~~~~~~dvI~~~~ 83 (389)
T 3q2o_A 10 IILPGKTIGIIGGGQLGRMMALAAKEMG--YKIAVLDPTKNSPCAQV----ADIEIVASYDDLKAIQHLAEISDVVTYEF 83 (389)
T ss_dssp CCCTTSEEEEECCSHHHHHHHHHHHHTT--CEEEEEESSTTCTTTTT----CSEEEECCTTCHHHHHHHHHTCSEEEESC
T ss_pred cCCCCCEEEEECCCHHHHHHHHHHHHcC--CEEEEEeCCCCCchHHh----CCceEecCcCCHHHHHHHHHhCCEeeecc
Confidence 3457889999999888777888777544 78888887765433211 11111111111123455566778777665
Q ss_pred ee
Q 045642 276 HA 277 (406)
Q Consensus 276 da 277 (406)
+.
T Consensus 84 e~ 85 (389)
T 3q2o_A 84 EN 85 (389)
T ss_dssp CC
T ss_pred cc
Confidence 43
No 315
>1i1q_B Anthranilate synthase component II; tryptophan biosynthesis, lyase; HET: TRP; 1.90A {Salmonella typhimurium} SCOP: c.23.16.1 PDB: 1i7q_B 1i7s_B*
Probab=39.98 E-value=1.5e+02 Score=25.34 Aligned_cols=76 Identities=14% Similarity=0.274 Sum_probs=40.8
Q ss_pred EEEEecCCCCcchHHHHHHHHhCCCceEEEcch----HHHHHhhcCC---EEEEcceeEeeCCCcccccchHHHHHHHhh
Q 045642 227 EVFIADGAPKFEGHILAKELDKKGLKAIVITDS----AVFAMISRVN---MVIVGVHAVMANGGVIAPAGLHVLALAAKK 299 (406)
Q Consensus 227 ~ViV~EsrP~~eG~~~a~~L~~~GI~vt~I~Ds----av~~~m~~vd---~VllGAdav~~nG~vvnk~GT~~lAl~Ak~ 299 (406)
+|.|++.--. --..+++.|.+.|+++++++.. .+...+...+ .||.|-- +.....|...-.+-+-.
T Consensus 2 ~i~iiDn~~s-~~~~i~~~l~~~G~~~~v~~~~~~~~~i~~~l~~~~~~~iil~gGp------g~~~~~~~~~~l~~~~~ 74 (192)
T 1i1q_B 2 DILLLDNIDS-FTWNLADQLRTNGHNVVIYRNHIPAQTLIDRLATMKNPVLMLSPGP------GVPSEAGCMPELLTRLR 74 (192)
T ss_dssp EEEEEECSCS-SHHHHHHHHHHTTCEEEEEETTSCSHHHHHHHTTCSSEEEEECCCS------SCGGGSTTHHHHHHHHB
T ss_pred cEEEEECCcc-HHHHHHHHHHHCCCeEEEEECCCCHHHHHHHhhhccCCeEEECCCC------cCchhCchHHHHHHHHh
Confidence 4566662111 1256789999999999998764 2323333333 4554421 11222343322222234
Q ss_pred CCCceEEecC
Q 045642 300 HDVPFVVVAS 309 (406)
Q Consensus 300 ~~vPv~V~ae 309 (406)
.++||+-+|=
T Consensus 75 ~~~PilGIC~ 84 (192)
T 1i1q_B 75 GKLPIIGICL 84 (192)
T ss_dssp TTBCEEEETH
T ss_pred cCCCEEEECc
Confidence 6899998874
No 316
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=39.97 E-value=55 Score=32.75 Aligned_cols=96 Identities=9% Similarity=0.024 Sum_probs=55.9
Q ss_pred cCcEEEeccChHHHHHHHHHHHHcCCceEEEEecCCCCcchHHHHHHHHhCCCceEEEcchHHHHHhhcCCEEEEcceeE
Q 045642 199 QNEVILTLGHSKFVKEFLCAAKEKKRSFEVFIADGAPKFEGHILAKELDKKGLKAIVITDSAVFAMISRVNMVIVGVHAV 278 (406)
Q Consensus 199 ~g~~ILT~g~S~tV~~~L~~A~~~~~~f~ViV~EsrP~~eG~~~a~~L~~~GI~vt~I~Dsav~~~m~~vd~VllGAdav 278 (406)
.|..||+.|...+-.+-++...+.|. +|.|++..... . .+.|.+.| .++++...--...+..++.|+...+-
T Consensus 11 ~~~~vlVvGgG~va~~k~~~L~~~ga--~V~vi~~~~~~---~-~~~l~~~~-~i~~~~~~~~~~~l~~~~lVi~at~~- 82 (457)
T 1pjq_A 11 RDRDCLIVGGGDVAERKARLLLEAGA--RLTVNALTFIP---Q-FTVWANEG-MLTLVEGPFDETLLDSCWLAIAATDD- 82 (457)
T ss_dssp BTCEEEEECCSHHHHHHHHHHHHTTB--EEEEEESSCCH---H-HHHHHTTT-SCEEEESSCCGGGGTTCSEEEECCSC-
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCcC--EEEEEcCCCCH---H-HHHHHhcC-CEEEEECCCCccccCCccEEEEcCCC-
Confidence 46789999999988888888876665 45555543322 1 23444322 23443322111223456666654321
Q ss_pred eeCCCcccccchHHHHHHHhhCCCceEEecCC
Q 045642 279 MANGGVIAPAGLHVLALAAKKHDVPFVVVAST 310 (406)
Q Consensus 279 ~~nG~vvnk~GT~~lAl~Ak~~~vPv~V~aes 310 (406)
.-+ ...++..|+.+++||-++.+.
T Consensus 83 ----~~~----n~~i~~~a~~~~i~vn~~d~~ 106 (457)
T 1pjq_A 83 ----DTV----NQRVSDAAESRRIFCNVVDAP 106 (457)
T ss_dssp ----HHH----HHHHHHHHHHTTCEEEETTCT
T ss_pred ----HHH----HHHHHHHHHHcCCEEEECCCc
Confidence 112 357888999999998776543
No 317
>2cy8_A D-phgat, D-phenylglycine aminotransferase; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; 2.30A {Pseudomonas stutzeri}
Probab=39.81 E-value=69 Score=31.14 Aligned_cols=138 Identities=12% Similarity=0.120 Sum_probs=61.6
Q ss_pred HHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHhc-ccCcEEEeccChHHHHHHHHHHHH-cCCceEEEEecCCCCcchH
Q 045642 165 KKLKSELIKAVNELI--EDINTCREGIAEQAMELI-HQNEVILTLGHSKFVKEFLCAAKE-KKRSFEVFIADGAPKFEGH 240 (406)
Q Consensus 165 ~~~k~~l~~~i~~~~--~e~~~~~~~I~~~a~~~I-~~g~~ILT~g~S~tV~~~L~~A~~-~~~~f~ViV~EsrP~~eG~ 240 (406)
+++++.+.+.++... .......+.+++.-.++. ....+++|.|.+..+..+++.|.. .++ -+|++.+ |.+.|.
T Consensus 76 ~~v~~a~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~~v~~~~gg~eA~~~al~~ar~~~~~-~~vi~~~--~~yhg~ 152 (453)
T 2cy8_A 76 PRVNAAIAEALSHGVQYAASHPLEVRWAERIVAAFPSIRKLRFTGSGTETTLLALRVARAFTGR-RMILRFE--GHYHGW 152 (453)
T ss_dssp HHHHHHHHHHHTTTCSSCSSCHHHHHHHHHHHHHCTTCSEEEEESCHHHHHHHHHHHHHHHHCC-CEEEEEC--C-----
T ss_pred HHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHhhCCCCCEEEEeCCHHHHHHHHHHHHHHhhCC-CEEEEEc--CCcCCC
Confidence 455555555554310 011123344554444444 334577778888888877777532 233 3677777 666664
Q ss_pred HH-HHHHH--------hCCCc------eEEEc--c-hHHHHHhhc---CCEEEEcceeEeeCCCcc-cccch-HHHHHHH
Q 045642 241 IL-AKELD--------KKGLK------AIVIT--D-SAVFAMISR---VNMVIVGVHAVMANGGVI-APAGL-HVLALAA 297 (406)
Q Consensus 241 ~~-a~~L~--------~~GI~------vt~I~--D-sav~~~m~~---vd~VllGAdav~~nG~vv-nk~GT-~~lAl~A 297 (406)
.. +..+. ..|++ +..++ | .++-..+.+ -.++|+ ++-+..++|++ ..-+- ..++-+|
T Consensus 153 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi-~ep~~~~tG~~~~~~~~l~~l~~l~ 231 (453)
T 2cy8_A 153 HDFSASGYNSHFDGQPAPGVLPETTANTLLIRPDDIEGMREVFANHGSDIAAFI-AEPVGSHFGVTPVSDSFLREGAELA 231 (453)
T ss_dssp -----------------------CGGGEEEECTTCHHHHHHHHHHHGGGEEEEE-ECSSEHHHHTEECCHHHHHHHHHHH
T ss_pred chhhHhhcCCccCCCcCCCCCccccCceeecCCCCHHHHHHHHHhcCCCEEEEE-ECCCCCCCCCcCCCHHHHHHHHHHH
Confidence 22 11111 13553 33332 3 233334432 112332 33344444433 32332 3466788
Q ss_pred hhCCCceEE
Q 045642 298 KKHDVPFVV 306 (406)
Q Consensus 298 k~~~vPv~V 306 (406)
++|++++++
T Consensus 232 ~~~g~~lI~ 240 (453)
T 2cy8_A 232 RQYGALFIL 240 (453)
T ss_dssp HHTTCEEEE
T ss_pred HHcCCEEEE
Confidence 999998775
No 318
>3hh1_A Tetrapyrrole methylase family protein; chlorobium tepidum, structural genom 2, protein structure initiative; 1.85A {Chlorobaculum tepidum}
Probab=39.70 E-value=61 Score=25.78 Aligned_cols=45 Identities=16% Similarity=0.330 Sum_probs=31.9
Q ss_pred HHHHHHHHHHHcCCceEEEEec-CCCCcch--HHHHHHHHhCCCceEEEc
Q 045642 211 FVKEFLCAAKEKKRSFEVFIAD-GAPKFEG--HILAKELDKKGLKAIVIT 257 (406)
Q Consensus 211 tV~~~L~~A~~~~~~f~ViV~E-srP~~eG--~~~a~~L~~~GI~vt~I~ 257 (406)
.+..++..+. +|++ -+++.| +-|..-| ..+++.+.+.||++.+||
T Consensus 68 ~~~~i~~~~~-~G~~-V~~l~d~GdP~i~~~~~~l~~~~~~~gi~v~viP 115 (117)
T 3hh1_A 68 AVRQVIELLE-EGSD-VALVTDAGTPAISDPGYTMASAAHAAGLPVVPVP 115 (117)
T ss_dssp HHHHHHHHHH-TTCC-EEEEEETTSCGGGSTTHHHHHHHHHTTCCEEEEC
T ss_pred HHHHHHHHHH-CCCe-EEEEecCCcCeEeccHHHHHHHHHHCCCcEEEeC
Confidence 3444555554 6665 455665 8887544 788899999999999986
No 319
>2gb3_A Aspartate aminotransferase; TM1698, structural genomics, PSI structure initiative, joint center for structural genomics; HET: LLP; 2.50A {Thermotoga maritima} SCOP: c.67.1.1
Probab=39.59 E-value=64 Score=30.81 Aligned_cols=98 Identities=18% Similarity=0.228 Sum_probs=51.1
Q ss_pred cCcEEEeccChHHHHHHHHHHHHcCCceEEEEecCCCCcchHHHHHHHHhCCCceEEEcchH------HHHHhhcCCEEE
Q 045642 199 QNEVILTLGHSKFVKEFLCAAKEKKRSFEVFIADGAPKFEGHILAKELDKKGLKAIVITDSA------VFAMISRVNMVI 272 (406)
Q Consensus 199 ~g~~ILT~g~S~tV~~~L~~A~~~~~~f~ViV~EsrP~~eG~~~a~~L~~~GI~vt~I~Dsa------v~~~m~~vd~Vl 272 (406)
...+++|.|.+..+..++..+.+.| -+|++. .|.+.+... .+...|.++..++-.. +..+-+.++.
T Consensus 102 ~~~v~~~~g~t~a~~~~~~~~~~~g--d~Vl~~--~~~~~~~~~--~~~~~g~~~~~v~~~~~~~~~~~~~l~~~l~~-- 173 (409)
T 2gb3_A 102 PENVLVTNGGSEAILFSFAVIANPG--DEILVL--EPFYANYNA--FAKIAGVKLIPVTRRMEEGFAIPQNLESFINE-- 173 (409)
T ss_dssp GGGEEEESHHHHHHHHHHHHHCCTT--CEEEEE--ESCCTHHHH--HHHHHTCEEEEEECCGGGTSCCCTTGGGGCCT--
T ss_pred HHHEEEeCCHHHHHHHHHHHhCCCC--CEEEEc--CCCchhHHH--HHHHcCCEEEEeccCCCCCCccHHHHHHhhCc--
Confidence 3567888887877777777664333 355554 355555433 2344577777664221 1111111110
Q ss_pred EcceeEeeCCCcccccch-------HHHHHHHhhCCCceEE
Q 045642 273 VGVHAVMANGGVIAPAGL-------HVLALAAKKHDVPFVV 306 (406)
Q Consensus 273 lGAdav~~nG~vvnk~GT-------~~lAl~Ak~~~vPv~V 306 (406)
...+|+-. ..-|..|. ..++-+|+++++++++
T Consensus 174 -~~~~v~~~-~p~nptG~~~~~~~l~~i~~~~~~~~~~li~ 212 (409)
T 2gb3_A 174 -RTKGIVLS-NPCNPTGVVYGKDEMRYLVEIAERHGLFLIV 212 (409)
T ss_dssp -TEEEEEEE-SSCTTTCCCCCHHHHHHHHHHHHHTTCEEEE
T ss_pred -CCeEEEEC-CCCCCCCCCcCHHHHHHHHHHHHHcCCEEEE
Confidence 11111111 22344453 4566788899998886
No 320
>4hv4_A UDP-N-acetylmuramate--L-alanine ligase; MURC, yersinia pestis peptidoglycan synthesis; HET: AMP; 2.25A {Yersinia pestis} PDB: 2f00_A
Probab=39.50 E-value=52 Score=33.21 Aligned_cols=65 Identities=18% Similarity=0.287 Sum_probs=41.1
Q ss_pred CceEEEEecCCCCcchHHHHHHHHhCCCceEEEcchHHHHHhhcCCEEEEcceeEeeCCCcccccchHHHHHHHhhCCCc
Q 045642 224 RSFEVFIADGAPKFEGHILAKELDKKGLKAIVITDSAVFAMISRVNMVIVGVHAVMANGGVIAPAGLHVLALAAKKHDVP 303 (406)
Q Consensus 224 ~~f~ViV~EsrP~~eG~~~a~~L~~~GI~vt~I~Dsav~~~m~~vd~VllGAdav~~nG~vvnk~GT~~lAl~Ak~~~vP 303 (406)
+.++|.+.|.++. .+...|.+.||++.+-.+.. .+..+|.||++. +|-. +.+.-..|++.++|
T Consensus 45 ~G~~V~~~D~~~~----~~~~~l~~~gi~~~~g~~~~---~~~~~d~vV~Sp-gi~~---------~~p~~~~a~~~gi~ 107 (494)
T 4hv4_A 45 EGYQISGSDLAPN----SVTQHLTALGAQIYFHHRPE---NVLDASVVVVST-AISA---------DNPEIVAAREARIP 107 (494)
T ss_dssp TTCEEEEECSSCC----HHHHHHHHTTCEEESSCCGG---GGTTCSEEEECT-TSCT---------TCHHHHHHHHTTCC
T ss_pred CCCeEEEEECCCC----HHHHHHHHCCCEEECCCCHH---HcCCCCEEEECC-CCCC---------CCHHHHHHHHCCCC
Confidence 3578999998754 34567999999887655443 245688887764 1111 23444556666666
Q ss_pred eE
Q 045642 304 FV 305 (406)
Q Consensus 304 v~ 305 (406)
|+
T Consensus 108 v~ 109 (494)
T 4hv4_A 108 VI 109 (494)
T ss_dssp EE
T ss_pred EE
Confidence 65
No 321
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=39.47 E-value=39 Score=35.34 Aligned_cols=62 Identities=24% Similarity=0.291 Sum_probs=46.0
Q ss_pred HHhcccCcEEEeccChHHHHHHHHHHHH-----c----CC--------------------------ceEEEEecCCCCcc
Q 045642 194 MELIHQNEVILTLGHSKFVKEFLCAAKE-----K----KR--------------------------SFEVFIADGAPKFE 238 (406)
Q Consensus 194 ~~~I~~g~~ILT~g~S~tV~~~L~~A~~-----~----~~--------------------------~f~ViV~EsrP~~e 238 (406)
..+.++|.++.||+....|++.|..|.= + ++ .+.|+|+-+. .-
T Consensus 206 ~~~~~~g~~~~t~~~~~~vr~~L~~aGf~v~~~~~~g~krem~~~~~~~~~~~~~~~~~~~~~~~~~~DVvIIGgG--ia 283 (676)
T 3ps9_A 206 ARLARPGGTLATFTSAGFVRRGLQDAGFTMQKRKGFGRKREMLCGVMEQTLPLPCSAPWFNRTGSSKREAAIIGGG--IA 283 (676)
T ss_dssp HHHEEEEEEEEESCCCHHHHHHHHHHTCEEEEEECSTTCCEEEEEECCSCCCCCCSCGGGCCCCCSCCEEEEECCS--HH
T ss_pred HHHhCCCCEEEeccCcHHHHHHHHhCCeEEEeccccccchhhhheeccccccccccCCcccCccCCCCCEEEECCC--HH
Confidence 4567889999999999999999998751 0 01 1345555433 24
Q ss_pred hHHHHHHHHhCCCceEEEc
Q 045642 239 GHILAKELDKKGLKAIVIT 257 (406)
Q Consensus 239 G~~~a~~L~~~GI~vt~I~ 257 (406)
|..+|..|++.|.+|+++-
T Consensus 284 GlsaA~~La~~G~~V~vlE 302 (676)
T 3ps9_A 284 SALLSLALLRRGWQVTLYC 302 (676)
T ss_dssp HHHHHHHHHTTTCEEEEEE
T ss_pred HHHHHHHHHHCCCeEEEEe
Confidence 7889999999999999985
No 322
>3g7q_A Valine-pyruvate aminotransferase; NP_462565.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 1.80A {Salmonella typhimurium}
Probab=39.44 E-value=37 Score=32.39 Aligned_cols=121 Identities=18% Similarity=0.228 Sum_probs=57.1
Q ss_pred HHHHHHHHHHHH----hcccCcEEEeccChHHHHHHHHHHHHcCC---ceEEEEecCCCCcchHHHH-HH---HHhCCCc
Q 045642 184 TCREGIAEQAME----LIHQNEVILTLGHSKFVKEFLCAAKEKKR---SFEVFIADGAPKFEGHILA-KE---LDKKGLK 252 (406)
Q Consensus 184 ~~~~~I~~~a~~----~I~~g~~ILT~g~S~tV~~~L~~A~~~~~---~f~ViV~EsrP~~eG~~~a-~~---L~~~GI~ 252 (406)
..++.|+++..+ .+....+++|.|.+..+..+++.+.+.|. .-+|++.+ .|.+.|...+ .. +...+..
T Consensus 79 ~lr~~ia~~~~~~~g~~~~~~~i~~t~G~t~al~~~~~~l~~~gd~~~~~~vi~~~-~p~~~~~~~~~~~~~~~~~~~~~ 157 (417)
T 3g7q_A 79 ALLNALAVLLRETLGWDIEPQNIALTNGSQSAFFYLFNLFAGRRADGSTKKVLFPL-APEYIGYADSGLEDDLFVSARPN 157 (417)
T ss_dssp HHHHHHHHHHHHHHCCCCCGGGEEEESCHHHHHHHHHHHHSBC----CCBEEEESS-CCCHHHHHC-----CCEEECCCE
T ss_pred HHHHHHHHHHHHHhCCCCCcccEEEeCCcHHHHHHHHHHHcCCCccCCcceEEEeC-CCccccchhhccchhhhccccCc
Confidence 444555554432 24455788888877777666666643321 22566653 4666664322 21 2234444
Q ss_pred eEEEcch--------HHHHHhhcCCEEEEcceeEeeCCCcccccchHHHHHHHhhCCCceEE
Q 045642 253 AIVITDS--------AVFAMISRVNMVIVGVHAVMANGGVIAPAGLHVLALAAKKHDVPFVV 306 (406)
Q Consensus 253 vt~I~Ds--------av~~~m~~vd~VllGAdav~~nG~vvnk~GT~~lAl~Ak~~~vPv~V 306 (406)
+..+++. ....+-++...|++. ..--+.|.++..---..++-.|++|++++++
T Consensus 158 ~~~~~~~~~~~~~d~~~l~~~~~~~~v~~~-~p~NptG~~~~~~~~~~l~~~a~~~~~~li~ 218 (417)
T 3g7q_A 158 IELLPEGQFKYHVDFEHLHIGEETGMICVS-RPTNPTGNVITDEELMKLDRLANQHNIPLVI 218 (417)
T ss_dssp EEEEGGGEEEEECCGGGCCCCTTEEEEEEE-SSCTTTCCCCCHHHHHHHHHHHHHTTCCEEE
T ss_pred ccccCCcccccccCHHHhccccCceEEEEC-CCCCCCCCccCHHHHHHHHHHHHHcCCEEEE
Confidence 4444322 110011122222221 1111223333322245567789999998886
No 323
>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*
Probab=39.41 E-value=88 Score=29.62 Aligned_cols=102 Identities=16% Similarity=0.118 Sum_probs=58.4
Q ss_pred CcEEEeccChHHHHHHHHHHHHcCCceEEEEecCCCCcchHHHHHHHHhC-CCceEEEcc-----hHHHHHhhcCCEEEE
Q 045642 200 NEVILTLGHSKFVKEFLCAAKEKKRSFEVFIADGAPKFEGHILAKELDKK-GLKAIVITD-----SAVFAMISRVNMVIV 273 (406)
Q Consensus 200 g~~ILT~g~S~tV~~~L~~A~~~~~~f~ViV~EsrP~~eG~~~a~~L~~~-GI~vt~I~D-----sav~~~m~~vd~Vll 273 (406)
+.+||+.|.+..+=..|..+..+ +.++|+++.-++... .++.|.+. ++.+. ..| .++..++..+|.|+.
T Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~-~g~~V~~~~R~~~~~---~~~~l~~~~~v~~v-~~D~l~d~~~l~~~~~~~d~Vi~ 79 (352)
T 1xgk_A 5 KKTIAVVGATGRQGASLIRVAAA-VGHHVRAQVHSLKGL---IAEELQAIPNVTLF-QGPLLNNVPLMDTLFEGAHLAFI 79 (352)
T ss_dssp CCCEEEESTTSHHHHHHHHHHHH-TTCCEEEEESCSCSH---HHHHHHTSTTEEEE-ESCCTTCHHHHHHHHTTCSEEEE
T ss_pred CCEEEEECCCCHHHHHHHHHHHh-CCCEEEEEECCCChh---hHHHHhhcCCcEEE-ECCccCCHHHHHHHHhcCCEEEE
Confidence 45688888877776666544322 236777765444321 23455543 44433 234 246667888888885
Q ss_pred cceeEeeCCCcccccchHHHHHHHhhCC-CceEEecCC
Q 045642 274 GVHAVMANGGVIAPAGLHVLALAAKKHD-VPFVVVAST 310 (406)
Q Consensus 274 GAdav~~nG~vvnk~GT~~lAl~Ak~~~-vPv~V~aes 310 (406)
-+... ..-.|..| ..++-+|+..+ ++-+|...+
T Consensus 80 ~a~~~---~~~~~~~~-~~l~~aa~~~g~v~~~V~~SS 113 (352)
T 1xgk_A 80 NTTSQ---AGDEIAIG-KDLADAAKRAGTIQHYIYSSM 113 (352)
T ss_dssp CCCST---TSCHHHHH-HHHHHHHHHHSCCSEEEEEEC
T ss_pred cCCCC---CcHHHHHH-HHHHHHHHHcCCccEEEEeCC
Confidence 44211 01235555 77777888888 765555544
No 324
>3grc_A Sensor protein, kinase; protein structure initiative II(PSI II), NYSGXRC, 11025B, structural genomics; 2.21A {Polaromonas SP}
Probab=39.41 E-value=1e+02 Score=23.81 Aligned_cols=78 Identities=17% Similarity=0.333 Sum_probs=46.4
Q ss_pred ceEEEEecCCCCcchHHHHHHHHhCCCceEEEcchHHHH-Hh--hcCCEEEEcceeEeeCCCcccccchHHHHHHHh---
Q 045642 225 SFEVFIADGAPKFEGHILAKELDKKGLKAIVITDSAVFA-MI--SRVNMVIVGVHAVMANGGVIAPAGLHVLALAAK--- 298 (406)
Q Consensus 225 ~f~ViV~EsrP~~eG~~~a~~L~~~GI~vt~I~Dsav~~-~m--~~vd~VllGAdav~~nG~vvnk~GT~~lAl~Ak--- 298 (406)
+.+|.|+|..|.. ...+...|.+.|+.|....+..-+. .+ ...|.||+..+- . ..-|.-.+..+-+
T Consensus 6 ~~~iLivdd~~~~-~~~l~~~l~~~g~~v~~~~~~~~a~~~l~~~~~dlvi~d~~l--~-----~~~g~~~~~~l~~~~~ 77 (140)
T 3grc_A 6 RPRILICEDDPDI-ARLLNLMLEKGGFDSDMVHSAAQALEQVARRPYAAMTVDLNL--P-----DQDGVSLIRALRRDSR 77 (140)
T ss_dssp CSEEEEECSCHHH-HHHHHHHHHHTTCEEEEECSHHHHHHHHHHSCCSEEEECSCC--S-----SSCHHHHHHHHHTSGG
T ss_pred CCCEEEEcCCHHH-HHHHHHHHHHCCCeEEEECCHHHHHHHHHhCCCCEEEEeCCC--C-----CCCHHHHHHHHHhCcc
Confidence 4577888776643 2355666777888877776643322 22 246777776432 2 2234444444443
Q ss_pred hCCCceEEecCC
Q 045642 299 KHDVPFVVVAST 310 (406)
Q Consensus 299 ~~~vPv~V~aes 310 (406)
..++|+++++..
T Consensus 78 ~~~~~ii~~s~~ 89 (140)
T 3grc_A 78 TRDLAIVVVSAN 89 (140)
T ss_dssp GTTCEEEEECTT
T ss_pred cCCCCEEEEecC
Confidence 458999999865
No 325
>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*
Probab=39.36 E-value=49 Score=30.51 Aligned_cols=105 Identities=18% Similarity=0.113 Sum_probs=57.6
Q ss_pred CcEEEeccChHHHHHHHHHH-HHcCCceEEEEecCCCCcchHHHHHHHHhC--CCceEEE-cc----hHHHHHhhc--CC
Q 045642 200 NEVILTLGHSKFVKEFLCAA-KEKKRSFEVFIADGAPKFEGHILAKELDKK--GLKAIVI-TD----SAVFAMISR--VN 269 (406)
Q Consensus 200 g~~ILT~g~S~tV~~~L~~A-~~~~~~f~ViV~EsrP~~eG~~~a~~L~~~--GI~vt~I-~D----sav~~~m~~--vd 269 (406)
+.+||+.|.++.+=..|... .++ ..+|+++.-.+..... ..|... +-.+.++ .| .++..++.. +|
T Consensus 3 ~~~vlVtGatG~iG~~l~~~L~~~--G~~V~~~~r~~~~~~~---~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d 77 (345)
T 2z1m_A 3 GKRALITGIRGQDGAYLAKLLLEK--GYEVYGADRRSGEFAS---WRLKELGIENDVKIIHMDLLEFSNIIRTIEKVQPD 77 (345)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHT--TCEEEEECSCCSTTTT---HHHHHTTCTTTEEECCCCTTCHHHHHHHHHHHCCS
T ss_pred CCEEEEECCCChHHHHHHHHHHHC--CCEEEEEECCCccccc---ccHhhccccCceeEEECCCCCHHHHHHHHHhcCCC
Confidence 56788889888776655444 333 4688887655432111 222222 1234333 22 345556664 57
Q ss_pred EEEEcceeEeeC---CC-----cccccchHHHHHHHhhCCC-ceEEecC
Q 045642 270 MVIVGVHAVMAN---GG-----VIAPAGLHVLALAAKKHDV-PFVVVAS 309 (406)
Q Consensus 270 ~VllGAdav~~n---G~-----vvnk~GT~~lAl~Ak~~~v-Pv~V~ae 309 (406)
.||--|-....+ .. -+|-.||..++-+|+.+++ .-+|...
T Consensus 78 ~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~S 126 (345)
T 2z1m_A 78 EVYNLAAQSFVGVSFEQPILTAEVDAIGVLRILEALRTVKPDTKFYQAS 126 (345)
T ss_dssp EEEECCCCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHCTTCEEEEEE
T ss_pred EEEECCCCcchhhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCceEEEEe
Confidence 777655322110 00 2467889999998888885 4444433
No 326
>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*
Probab=39.33 E-value=1.1e+02 Score=26.72 Aligned_cols=77 Identities=12% Similarity=0.088 Sum_probs=47.3
Q ss_pred cCcEEEeccChHHHHHHHHHHHHcCCceEEEEecCCCCcchHHHHHHHHhCCCceEEE-cc----hHHHHHhh-------
Q 045642 199 QNEVILTLGHSKFVKEFLCAAKEKKRSFEVFIADGAPKFEGHILAKELDKKGLKAIVI-TD----SAVFAMIS------- 266 (406)
Q Consensus 199 ~g~~ILT~g~S~tV~~~L~~A~~~~~~f~ViV~EsrP~~eG~~~a~~L~~~GI~vt~I-~D----sav~~~m~------- 266 (406)
.|.+||..|.|+.+=..+.....+ +..+|+++..++......++++|...|.++.++ .| .++..++.
T Consensus 6 ~~k~vlVTGasggiG~~~a~~l~~-~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g 84 (258)
T 3afn_B 6 KGKRVLITGSSQGIGLATARLFAR-AGAKVGLHGRKAPANIDETIASMRADGGDAAFFAADLATSEACQQLVDEFVAKFG 84 (258)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHH-TTCEEEEEESSCCTTHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEeCCCChHHHHHHHHHHH-CCCEEEEECCCchhhHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 456788888887776655444322 346788876553334456777787777666554 33 23444454
Q ss_pred cCCEEEEcce
Q 045642 267 RVNMVIVGVH 276 (406)
Q Consensus 267 ~vd~VllGAd 276 (406)
++|.||--|-
T Consensus 85 ~id~vi~~Ag 94 (258)
T 3afn_B 85 GIDVLINNAG 94 (258)
T ss_dssp SCSEEEECCC
T ss_pred CCCEEEECCC
Confidence 6888887653
No 327
>3asa_A LL-diaminopimelate aminotransferase; PLP dependent aminotransferase; 2.05A {Chlamydia trachomatis} PDB: 3asb_A*
Probab=39.02 E-value=95 Score=29.45 Aligned_cols=100 Identities=15% Similarity=0.193 Sum_probs=50.7
Q ss_pred cCcEEEeccChHHHHHHHHHHHHcCCceEEEEecCCCCcchHHHHHHHHhCCCc-eEEEcchHHHHH---h---hcCCEE
Q 045642 199 QNEVILTLGHSKFVKEFLCAAKEKKRSFEVFIADGAPKFEGHILAKELDKKGLK-AIVITDSAVFAM---I---SRVNMV 271 (406)
Q Consensus 199 ~g~~ILT~g~S~tV~~~L~~A~~~~~~f~ViV~EsrP~~eG~~~a~~L~~~GI~-vt~I~Dsav~~~---m---~~vd~V 271 (406)
...+++|.|.+..+.. +..+...| -+|++. .|.+.|.. ..+...|.. +..++-..-..+ + +++..|
T Consensus 95 ~~~v~~~~G~~~al~~-~~~~~~~g--d~Vl~~--~p~y~~~~--~~~~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v 167 (400)
T 3asa_A 95 AKEIFISDGAKVDLFR-LLSFFGPN--QTVAIQ--DPSYPAYL--DIARLTGAKEIIALPCLQENAFFPEFPEDTHIDIL 167 (400)
T ss_dssp GGGEEEESCHHHHHHH-HHHHHCSS--CEEEEE--ESCCHHHH--HHHHHTTCSEEEEEECCGGGTTCCCCCTTCCCSEE
T ss_pred HHHEEEccChHHHHHH-HHHHcCCC--CEEEEC--CCCcHHHH--HHHHHcCCcceEecccchhcCcccChhhccCccEE
Confidence 4467777776666555 44444333 356664 37777743 234557888 777652211001 1 234444
Q ss_pred EEcceeEeeCCCcccccchHHHHHHHhhCCCceEE
Q 045642 272 IVGVHAVMANGGVIAPAGLHVLALAAKKHDVPFVV 306 (406)
Q Consensus 272 llGAdav~~nG~vvnk~GT~~lAl~Ak~~~vPv~V 306 (406)
++. ..--+.|.+...-=-..++-.|+++++.+++
T Consensus 168 ~l~-~p~nptG~~~~~~~l~~l~~~~~~~~~~li~ 201 (400)
T 3asa_A 168 CLC-SPNNPTGTVLNKDQLRAIVHYAIEHEILILF 201 (400)
T ss_dssp EEE-SSCTTTCCCCCHHHHHHHHHHHHHTTCEEEE
T ss_pred EEe-CCCCCCCCcCCHHHHHHHHHHHHHcCCEEEE
Confidence 442 1111223332221122466678999987775
No 328
>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}
Probab=38.72 E-value=51 Score=31.05 Aligned_cols=105 Identities=16% Similarity=0.125 Sum_probs=60.3
Q ss_pred CcEEEeccChHHHHHHHHHHHHcCCceEEEEecCCCCcchHHHHHHHH-hCCCceEEE--c-c-hHHHHHhhcCCEEEEc
Q 045642 200 NEVILTLGHSKFVKEFLCAAKEKKRSFEVFIADGAPKFEGHILAKELD-KKGLKAIVI--T-D-SAVFAMISRVNMVIVG 274 (406)
Q Consensus 200 g~~ILT~g~S~tV~~~L~~A~~~~~~f~ViV~EsrP~~eG~~~a~~L~-~~GI~vt~I--~-D-sav~~~m~~vd~VllG 274 (406)
+.+||+.|.+..+=..|..+..+...++|+++.-.+.... .+. ..++.+... . | ..+..+++++|.||--
T Consensus 24 ~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~-----~~~~~~~v~~~~~Dl~~d~~~~~~~~~~~d~Vih~ 98 (372)
T 3slg_A 24 AKKVLILGVNGFIGHHLSKRILETTDWEVFGMDMQTDRLG-----DLVKHERMHFFEGDITINKEWVEYHVKKCDVILPL 98 (372)
T ss_dssp CCEEEEESCSSHHHHHHHHHHHHHSSCEEEEEESCCTTTG-----GGGGSTTEEEEECCTTTCHHHHHHHHHHCSEEEEC
T ss_pred CCEEEEECCCChHHHHHHHHHHhCCCCEEEEEeCChhhhh-----hhccCCCeEEEeCccCCCHHHHHHHhccCCEEEEc
Confidence 4678888988777766655442222468888865553211 111 234433321 1 2 3455677788888764
Q ss_pred ceeEeeCCC--------cccccchHHHHHHHhhCCCceEEecC
Q 045642 275 VHAVMANGG--------VIAPAGLHVLALAAKKHDVPFVVVAS 309 (406)
Q Consensus 275 Adav~~nG~--------vvnk~GT~~lAl~Ak~~~vPv~V~ae 309 (406)
|-....... -+|-.||..+.-+|+..+..|+.++.
T Consensus 99 A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~v~~SS 141 (372)
T 3slg_A 99 VAIATPATYVKQPLRVFELDFEANLPIVRSAVKYGKHLVFPST 141 (372)
T ss_dssp BCCCCHHHHHHCHHHHHHHHTTTTHHHHHHHHHHTCEEEEECC
T ss_pred CccccHHHHhhCHHHHHHHHHHHHHHHHHHHHHhCCcEEEeCc
Confidence 432211100 24678999999999988855555544
No 329
>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0
Probab=38.71 E-value=32 Score=31.08 Aligned_cols=90 Identities=17% Similarity=0.209 Sum_probs=48.9
Q ss_pred EEEeccChHHHHHHHHHHHHcCCceEEEEecCCCCcchHHHHHHHHhCCCceEEEcc-hHHHHHhh--cCCEEEEcceeE
Q 045642 202 VILTLGHSKFVKEFLCAAKEKKRSFEVFIADGAPKFEGHILAKELDKKGLKAIVITD-SAVFAMIS--RVNMVIVGVHAV 278 (406)
Q Consensus 202 ~ILT~g~S~tV~~~L~~A~~~~~~f~ViV~EsrP~~eG~~~a~~L~~~GI~vt~I~D-sav~~~m~--~vd~VllGAdav 278 (406)
+||..|.++.+=..|.... ..+..+|+++.-.+.. +.| .++..++. ++|.||--|-..
T Consensus 7 ~ilVtGatG~iG~~l~~~L-~~~g~~V~~~~r~~~D------------------~~d~~~~~~~~~~~~~d~vi~~a~~~ 67 (287)
T 3sc6_A 7 RVIITGANGQLGKQLQEEL-NPEEYDIYPFDKKLLD------------------ITNISQVQQVVQEIRPHIIIHCAAYT 67 (287)
T ss_dssp EEEEESTTSHHHHHHHHHS-CTTTEEEEEECTTTSC------------------TTCHHHHHHHHHHHCCSEEEECCCCC
T ss_pred EEEEECCCCHHHHHHHHHH-HhCCCEEEEecccccC------------------CCCHHHHHHHHHhcCCCEEEECCccc
Confidence 5666676666665555544 2234666666442210 011 23344444 466666544222
Q ss_pred eeCC--------CcccccchHHHHHHHhhCCCceEEecCC
Q 045642 279 MANG--------GVIAPAGLHVLALAAKKHDVPFVVVAST 310 (406)
Q Consensus 279 ~~nG--------~vvnk~GT~~lAl~Ak~~~vPv~V~aes 310 (406)
..+. --+|-.|+..++-+|+.++++|+.++..
T Consensus 68 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~v~~SS~ 107 (287)
T 3sc6_A 68 KVDQAEKERDLAYVINAIGARNVAVASQLVGAKLVYISTD 107 (287)
T ss_dssp CHHHHTTCHHHHHHHHTHHHHHHHHHHHHHTCEEEEEEEG
T ss_pred ChHHHhcCHHHHHHHHHHHHHHHHHHHHHcCCeEEEEchh
Confidence 1110 1246678999999999999986666544
No 330
>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}
Probab=38.67 E-value=30 Score=31.57 Aligned_cols=98 Identities=19% Similarity=0.256 Sum_probs=60.5
Q ss_pred cCcEEEeccChHHHHHHHHHH-HHcCCceEEEEecCCCCcchHHHHHHHHhCCCceEEE-cc----hHHHHHhh------
Q 045642 199 QNEVILTLGHSKFVKEFLCAA-KEKKRSFEVFIADGAPKFEGHILAKELDKKGLKAIVI-TD----SAVFAMIS------ 266 (406)
Q Consensus 199 ~g~~ILT~g~S~tV~~~L~~A-~~~~~~f~ViV~EsrP~~eG~~~a~~L~~~GI~vt~I-~D----sav~~~m~------ 266 (406)
.|.++|+.|.|+-+=..+... .++ ..+|+++..+.......+++++...|-.+..+ .| .++..++.
T Consensus 26 ~~k~~lVTGas~GIG~aia~~la~~--G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 103 (267)
T 3u5t_A 26 TNKVAIVTGASRGIGAAIAARLASD--GFTVVINYAGKAAAAEEVAGKIEAAGGKALTAQADVSDPAAVRRLFATAEEAF 103 (267)
T ss_dssp -CCEEEEESCSSHHHHHHHHHHHHH--TCEEEEEESSCSHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 577888888887776655443 333 46788887776666677888888888777655 33 23334443
Q ss_pred -cCCEEEEcceeEeeCCCc-------------ccccchHHHHHHHhh
Q 045642 267 -RVNMVIVGVHAVMANGGV-------------IAPAGLHVLALAAKK 299 (406)
Q Consensus 267 -~vd~VllGAdav~~nG~v-------------vnk~GT~~lAl~Ak~ 299 (406)
++|.+|-.|- +...+.+ +|-.|++.++.++..
T Consensus 104 g~iD~lvnnAG-~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~ 149 (267)
T 3u5t_A 104 GGVDVLVNNAG-IMPLTTIAETGDAVFDRVIAVNLKGTFNTLREAAQ 149 (267)
T ss_dssp SCEEEEEECCC-CCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCEEEECCC-CCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5676666552 2222222 567788877755543
No 331
>3mz0_A Inositol 2-dehydrogenase/D-chiro-inositol 3-dehyd; MYO-inositol dehydrogenase, bsidh, oxidoreductase; HET: MSE PGE; 1.54A {Bacillus subtilis} PDB: 3nt2_A* 3nt4_A* 3nt5_A* 3nto_A* 3ntq_A* 3ntr_A*
Probab=38.60 E-value=2.2e+02 Score=26.64 Aligned_cols=110 Identities=17% Similarity=0.122 Sum_probs=54.9
Q ss_pred EEEeccChHHHHHHHHHHHHcCCceEEE-EecCCCCcchHHHHHHHH-hCCCceEEEcchHHHHHhhcCCEEEEccee--
Q 045642 202 VILTLGHSKFVKEFLCAAKEKKRSFEVF-IADGAPKFEGHILAKELD-KKGLKAIVITDSAVFAMISRVNMVIVGVHA-- 277 (406)
Q Consensus 202 ~ILT~g~S~tV~~~L~~A~~~~~~f~Vi-V~EsrP~~eG~~~a~~L~-~~GI~vt~I~Dsav~~~m~~vd~VllGAda-- 277 (406)
.|..+|....-...+....++...+++. |++..|. -++.++ +.|+++....|-.-..--+++|.|++..-.
T Consensus 4 rigiIG~G~~g~~~~~~l~~~~~~~~l~av~d~~~~-----~~~~~~~~~g~~~~~~~~~~~ll~~~~~D~V~i~tp~~~ 78 (344)
T 3mz0_A 4 RIGVIGTGAIGKEHINRITNKLSGAEIVAVTDVNQE-----AAQKVVEQYQLNATVYPNDDSLLADENVDAVLVTSWGPA 78 (344)
T ss_dssp EEEEECCSHHHHHHHHHHHHTCSSEEEEEEECSSHH-----HHHHHHHHTTCCCEEESSHHHHHHCTTCCEEEECSCGGG
T ss_pred EEEEECccHHHHHHHHHHHhhCCCcEEEEEEcCCHH-----HHHHHHHHhCCCCeeeCCHHHHhcCCCCCEEEECCCchh
Confidence 3555565544444444443233567765 5554332 233333 357666666664433333458888885421
Q ss_pred -------EeeCC--------CcccccchHHHHHHHhhCCCceEEecCCcccccc
Q 045642 278 -------VMANG--------GVIAPAGLHVLALAAKKHDVPFVVVASTHELCSL 316 (406)
Q Consensus 278 -------v~~nG--------~vvnk~GT~~lAl~Ak~~~vPv~V~aes~K~~~~ 316 (406)
.+..| -..+......+.-+|+..+++++.++-.+.|.|.
T Consensus 79 h~~~~~~al~~Gk~vl~EKP~a~~~~e~~~l~~~a~~~g~~~~~v~~~~r~~p~ 132 (344)
T 3mz0_A 79 HESSVLKAIKAQKYVFCEKPLATTAEGCMRIVEEEIKVGKRLVQVGFMRRYDSG 132 (344)
T ss_dssp HHHHHHHHHHTTCEEEECSCSCSSHHHHHHHHHHHHHHSSCCEEECCGGGGSHH
T ss_pred HHHHHHHHHHCCCcEEEcCCCCCCHHHHHHHHHHHHHHCCEEEEEecccccCHH
Confidence 12222 1223334444556667777777555555666553
No 332
>1qg8_A Protein (spore coat polysaccharide biosynthesis P SPSA); glycosyltransferase, transferase; 1.50A {Bacillus subtilis} SCOP: c.68.1.1 PDB: 1h7q_A* 1h7l_A 1qgq_A* 1qgs_A*
Probab=38.55 E-value=82 Score=27.57 Aligned_cols=55 Identities=15% Similarity=0.247 Sum_probs=37.1
Q ss_pred EEEeccChHHHHHHHHHHHHcC-CceEEEEecCCCCcchHHHHHHHHhCCCceEEEc
Q 045642 202 VILTLGHSKFVKEFLCAAKEKK-RSFEVFIADGAPKFEGHILAKELDKKGLKAIVIT 257 (406)
Q Consensus 202 ~ILT~g~S~tV~~~L~~A~~~~-~~f~ViV~EsrP~~eG~~~a~~L~~~GI~vt~I~ 257 (406)
+|-||.....+.+.|....++. ..++|||++.....+-...++++.+ .-++.++.
T Consensus 6 iIp~yn~~~~l~~~l~Sl~~q~~~~~eiivvDd~S~d~t~~~~~~~~~-~~~i~~i~ 61 (255)
T 1qg8_A 6 IMTSYNKSDYVAKSISSILSQTFSDFELFIMDDNSNEETLNVIRPFLN-DNRVRFYQ 61 (255)
T ss_dssp EEEESSCTTTHHHHHHHHHTCSCCCEEEEEEECSCCHHHHHHHGGGGG-STTEEEEE
T ss_pred EEEcCCCHHHHHHHHHHHHhccCCceEEEEEECCCCchHHHHHHHHhh-cCCEEEEe
Confidence 4556777888888888877543 4688998887766555556666544 44556553
No 333
>3nzo_A UDP-N-acetylglucosamine 4,6-dehydratase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, NAD; HET: MSE NAD; 2.10A {Vibrio fischeri} PDB: 3pvz_A*
Probab=38.45 E-value=2.7e+02 Score=26.64 Aligned_cols=112 Identities=8% Similarity=-0.042 Sum_probs=63.9
Q ss_pred cCcEEEeccChHHHHHHHHHHHHcCCceEEEEecCCCCcchHHHHHHHHhC----CCceEEE----cchH-HHHHh--hc
Q 045642 199 QNEVILTLGHSKFVKEFLCAAKEKKRSFEVFIADGAPKFEGHILAKELDKK----GLKAIVI----TDSA-VFAMI--SR 267 (406)
Q Consensus 199 ~g~~ILT~g~S~tV~~~L~~A~~~~~~f~ViV~EsrP~~eG~~~a~~L~~~----GI~vt~I----~Dsa-v~~~m--~~ 267 (406)
.+.+||+.|.++.+=..|.....+....+|+++.-.+. .-..+..+|.+. +..+.++ .|.. +..++ .+
T Consensus 34 ~~k~vLVTGatG~IG~~l~~~L~~~g~~~V~~~~r~~~-~~~~~~~~l~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~~ 112 (399)
T 3nzo_A 34 SQSRFLVLGGAGSIGQAVTKEIFKRNPQKLHVVDISEN-NMVELVRDIRSSFGYINGDFQTFALDIGSIEYDAFIKADGQ 112 (399)
T ss_dssp HTCEEEEETTTSHHHHHHHHHHHTTCCSEEEEECSCHH-HHHHHHHHHHHHTCCCSSEEEEECCCTTSHHHHHHHHHCCC
T ss_pred CCCEEEEEcCChHHHHHHHHHHHHCCCCEEEEEECCcc-hHHHHHHHHHHhcCCCCCcEEEEEEeCCCHHHHHHHHHhCC
Confidence 46789998988877776655542222257787765332 123445555542 2344443 3433 33334 36
Q ss_pred CCEEEEcceeEee----------CCCcccccchHHHHHHHhhCCCceEEecCCc
Q 045642 268 VNMVIVGVHAVMA----------NGGVIAPAGLHVLALAAKKHDVPFVVVASTH 311 (406)
Q Consensus 268 vd~VllGAdav~~----------nG~vvnk~GT~~lAl~Ak~~~vPv~V~aes~ 311 (406)
+|.|+--|-.... ..--+|-.||..++-+|+.++++-+|...|-
T Consensus 113 ~D~Vih~Aa~~~~~~~~~~~~~~~~~~~Nv~gt~~l~~aa~~~gv~r~V~iSS~ 166 (399)
T 3nzo_A 113 YDYVLNLSALKHVRSEKDPFTLMRMIDVNVFNTDKTIQQSIDAGAKKYFCVSTD 166 (399)
T ss_dssp CSEEEECCCCCCGGGGSSHHHHHHHHHHHTHHHHHHHHHHHHTTCSEEEEECCS
T ss_pred CCEEEECCCcCCCccccCHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEeCC
Confidence 7877754421110 0012467899999999999998656655553
No 334
>3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A*
Probab=38.38 E-value=1e+02 Score=29.15 Aligned_cols=19 Identities=26% Similarity=0.302 Sum_probs=14.6
Q ss_pred HHHHHhhCCCceEEecCCc
Q 045642 293 LALAAKKHDVPFVVVASTH 311 (406)
Q Consensus 293 lAl~Ak~~~vPv~V~aes~ 311 (406)
..++|+..++|+++....+
T Consensus 143 ~~~aa~~~giP~v~~~~~~ 161 (412)
T 3otg_A 143 AGLAALKAGIPTICHGVGR 161 (412)
T ss_dssp HHHHHHHHTCCEEEECCSC
T ss_pred HHHHHHHcCCCEEEecccc
Confidence 4578899999998876543
No 335
>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A
Probab=38.36 E-value=1.3e+02 Score=26.57 Aligned_cols=73 Identities=12% Similarity=0.198 Sum_probs=46.1
Q ss_pred cCcEEEeccChHHHHHHHHHHHHcCCceEEEEecCCCCcchHHHHHHHHhCCCceEEE-cc----hHHHHHhh-------
Q 045642 199 QNEVILTLGHSKFVKEFLCAAKEKKRSFEVFIADGAPKFEGHILAKELDKKGLKAIVI-TD----SAVFAMIS------- 266 (406)
Q Consensus 199 ~g~~ILT~g~S~tV~~~L~~A~~~~~~f~ViV~EsrP~~eG~~~a~~L~~~GI~vt~I-~D----sav~~~m~------- 266 (406)
.|.+||+.|.|+.+=..+.....+ +..+|+++..++. ...+++|.+.|.++.++ .| .++..++.
T Consensus 3 ~~k~vlVTGas~giG~~ia~~l~~-~G~~V~~~~r~~~---~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g 78 (255)
T 2q2v_A 3 KGKTALVTGSTSGIGLGIAQVLAR-AGANIVLNGFGDP---APALAEIARHGVKAVHHPADLSDVAQIEALFALAEREFG 78 (255)
T ss_dssp TTCEEEESSCSSHHHHHHHHHHHH-TTCEEEEECSSCC---HHHHHHHHTTSCCEEEECCCTTSHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHH-CCCEEEEEeCCch---HHHHHHHHhcCCceEEEeCCCCCHHHHHHHHHHHHHHcC
Confidence 356788888887776665444322 3467888765554 45677787777776654 34 34445554
Q ss_pred cCCEEEEcc
Q 045642 267 RVNMVIVGV 275 (406)
Q Consensus 267 ~vd~VllGA 275 (406)
++|.||--|
T Consensus 79 ~id~lv~~A 87 (255)
T 2q2v_A 79 GVDILVNNA 87 (255)
T ss_dssp SCSEEEECC
T ss_pred CCCEEEECC
Confidence 678777655
No 336
>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}
Probab=38.22 E-value=1e+02 Score=27.66 Aligned_cols=97 Identities=7% Similarity=0.022 Sum_probs=59.7
Q ss_pred cCcEEEeccChHHHHHHHHHHHHcCCceEEEEecCCCCcchHHHHHHHHhCCCceEEE-cc----hHHHHHhh-------
Q 045642 199 QNEVILTLGHSKFVKEFLCAAKEKKRSFEVFIADGAPKFEGHILAKELDKKGLKAIVI-TD----SAVFAMIS------- 266 (406)
Q Consensus 199 ~g~~ILT~g~S~tV~~~L~~A~~~~~~f~ViV~EsrP~~eG~~~a~~L~~~GI~vt~I-~D----sav~~~m~------- 266 (406)
.+.++|+.|.++.+=..+.... ..+..+|+++..+...........+...|..+.++ .| ..+..++.
T Consensus 24 ~~k~vlITGas~gIG~~~a~~l-~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g 102 (269)
T 3gk3_A 24 AKRVAFVTGGMGGLGAAISRRL-HDAGMAVAVSHSERNDHVSTWLMHERDAGRDFKAYAVDVADFESCERCAEKVLADFG 102 (269)
T ss_dssp CCCEEEETTTTSHHHHHHHHHH-HTTTCEEEEEECSCHHHHHHHHHHHHTTTCCCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred cCCEEEEECCCchHHHHHHHHH-HHCCCEEEEEcCCchHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcC
Confidence 5678888898888777665554 23457888887666555556667777777766654 33 23333333
Q ss_pred cCCEEEEcceeEeeCCCc-------------ccccchHHHHHHH
Q 045642 267 RVNMVIVGVHAVMANGGV-------------IAPAGLHVLALAA 297 (406)
Q Consensus 267 ~vd~VllGAdav~~nG~v-------------vnk~GT~~lAl~A 297 (406)
++|.+|-.|- +...+.+ +|-.|++.+...+
T Consensus 103 ~id~li~nAg-~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~ 145 (269)
T 3gk3_A 103 KVDVLINNAG-ITRDATFMKMTKGDWDAVMRTDLDAMFNVTKQF 145 (269)
T ss_dssp CCSEEEECCC-CCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHH
T ss_pred CCCEEEECCC-cCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHH
Confidence 6888877663 3333321 3566766666544
No 337
>2p5x_A ASMTL, N-acetylserotonin O-methyltransferase-like protei; structural genomics, structural genomics consortium, unknown function; 2.00A {Homo sapiens}
Probab=38.16 E-value=75 Score=28.97 Aligned_cols=96 Identities=21% Similarity=0.161 Sum_probs=60.6
Q ss_pred EEEeccChHHHHHHHHHHHHcCCceEEEEe---cCCCCcc---hHHHHHHHHhCCCceEEEcchHHHHHhh----cCCEE
Q 045642 202 VILTLGHSKFVKEFLCAAKEKKRSFEVFIA---DGAPKFE---GHILAKELDKKGLKAIVITDSAVFAMIS----RVNMV 271 (406)
Q Consensus 202 ~ILT~g~S~tV~~~L~~A~~~~~~f~ViV~---EsrP~~e---G~~~a~~L~~~GI~vt~I~Dsav~~~m~----~vd~V 271 (406)
.|| -|.|..=.++|..+ |-.|+|+.. |+....+ -..++..|+..+- . ++..-+. .-+.+
T Consensus 6 lIL-AS~SPrR~eLL~~~---Gi~f~v~~~~iDE~~~~~~~~~p~~~v~~lA~~KA------~-av~~~~~~~~~~~~~~ 74 (230)
T 2p5x_A 6 VVL-ASASPRRQEILSNA---GLRFEVVPSKFKEKLDKASFATPYGYAMETAKQKA------L-EVANRLYQKDLRAPDV 74 (230)
T ss_dssp EEE-CCCCHHHHHHHHHT---TCCCEECCCCCCCCCCGGGSSSHHHHHHHHHHHHH------H-HHHHHHHHHHSCCCSE
T ss_pred EEE-eCCCHHHHHHHHHC---CCCeEEeCCCCCCCCCccccCCHHHHHHHHHHHHH------H-HHHHHhhhhccCCCCE
Confidence 344 46676666677665 678998865 4433333 3567777776541 0 1222221 22458
Q ss_pred EEcceeEe-eCCCcccccchHHHH--HHHhhCCCceEEec
Q 045642 272 IVGVHAVM-ANGGVIAPAGLHVLA--LAAKKHDVPFVVVA 308 (406)
Q Consensus 272 llGAdav~-~nG~vvnk~GT~~lA--l~Ak~~~vPv~V~a 308 (406)
|||||.|. -||.++.|-.+..-| ++.+..|...-|.+
T Consensus 75 VIgaDTvV~~dg~IlgKP~d~eeA~~mL~~lSG~~h~V~T 114 (230)
T 2p5x_A 75 VIGADTIVTVGGLILEKPVDKQDAYRMLSRLSGREHSVFT 114 (230)
T ss_dssp EEEEEEEEEETTEEECCCSSHHHHHHHHHHHTTSEEEEEE
T ss_pred EEEeCeEEEECCEEecCCCCHHHHHHHHHHhCCCcEEEEE
Confidence 99999987 588999999998777 46666777765544
No 338
>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}
Probab=38.09 E-value=99 Score=28.17 Aligned_cols=100 Identities=16% Similarity=0.167 Sum_probs=59.7
Q ss_pred cCcEEEeccChHHHHHHHHHHHHcCCceEEEEecCCCCcchHHHHHHHHhCCCceEEE-cc----hHHHHHhh-------
Q 045642 199 QNEVILTLGHSKFVKEFLCAAKEKKRSFEVFIADGAPKFEGHILAKELDKKGLKAIVI-TD----SAVFAMIS------- 266 (406)
Q Consensus 199 ~g~~ILT~g~S~tV~~~L~~A~~~~~~f~ViV~EsrP~~eG~~~a~~L~~~GI~vt~I-~D----sav~~~m~------- 266 (406)
.|.++|+.|.++-+=..+..... ....+|+++..+.......++++|...|..+.++ .| .++..++.
T Consensus 28 ~~k~~lVTGas~GIG~aia~~la-~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 106 (280)
T 4da9_A 28 ARPVAIVTGGRRGIGLGIARALA-ASGFDIAITGIGDAEGVAPVIAELSGLGARVIFLRADLADLSSHQATVDAVVAEFG 106 (280)
T ss_dssp CCCEEEEETTTSHHHHHHHHHHH-HTTCEEEEEESCCHHHHHHHHHHHHHTTCCEEEEECCTTSGGGHHHHHHHHHHHHS
T ss_pred CCCEEEEecCCCHHHHHHHHHHH-HCCCeEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcC
Confidence 46788888888777665544431 2346788887655444567788888888777765 23 23444443
Q ss_pred cCCEEEEcceeE-eeCCC-------------cccccchHHHHHHHhh
Q 045642 267 RVNMVIVGVHAV-MANGG-------------VIAPAGLHVLALAAKK 299 (406)
Q Consensus 267 ~vd~VllGAdav-~~nG~-------------vvnk~GT~~lAl~Ak~ 299 (406)
++|.+|-.|-.. ...+. -+|-.|++.++.++..
T Consensus 107 ~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~ 153 (280)
T 4da9_A 107 RIDCLVNNAGIASIVRDDFLDLKPENFDTIVGVNLRGTVFFTQAVLK 153 (280)
T ss_dssp CCCEEEEECC------CCGGGCCHHHHHHHTTTHHHHHHHHHHHHHH
T ss_pred CCCEEEECCCccccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 688888766321 11111 1466788777655443
No 339
>2qr3_A Two-component system response regulator; structural genomics, signal receiver, PSI-2, protein structu initiative; 1.80A {Bacteroides fragilis}
Probab=38.03 E-value=85 Score=24.23 Aligned_cols=83 Identities=16% Similarity=0.173 Sum_probs=41.8
Q ss_pred ceEEEEecCCCCcchHHHHHHHHhCCCceEEEcchHH-HHHhh--cCCEEEEcceeEeeCCCcccccchHHHHHHHh-hC
Q 045642 225 SFEVFIADGAPKFEGHILAKELDKKGLKAIVITDSAV-FAMIS--RVNMVIVGVHAVMANGGVIAPAGLHVLALAAK-KH 300 (406)
Q Consensus 225 ~f~ViV~EsrP~~eG~~~a~~L~~~GI~vt~I~Dsav-~~~m~--~vd~VllGAdav~~nG~vvnk~GT~~lAl~Ak-~~ 300 (406)
..+|.++|..|.. ...+...|.+.|+.|....+..- ...+. ..|.||+..+. ..+..-...|--.+..+-+ ..
T Consensus 3 ~~~ilivdd~~~~-~~~l~~~L~~~g~~v~~~~~~~~a~~~l~~~~~dlvi~d~~~--~~~~~~~~~g~~~~~~l~~~~~ 79 (140)
T 2qr3_A 3 LGTIIIVDDNKGV-LTAVQLLLKNHFSKVITLSSPVSLSTVLREENPEVVLLDMNF--TSGINNGNEGLFWLHEIKRQYR 79 (140)
T ss_dssp CCEEEEECSCHHH-HHHHHHHHTTTSSEEEEECCHHHHHHHHHHSCEEEEEEETTT--TC-----CCHHHHHHHHHHHCT
T ss_pred CceEEEEeCCHHH-HHHHHHHHHhCCcEEEEeCCHHHHHHHHHcCCCCEEEEeCCc--CCCCCCCccHHHHHHHHHhhCc
Confidence 3567777766532 23455666677777776555322 22222 35666665432 1000002234433433333 35
Q ss_pred CCceEEecCC
Q 045642 301 DVPFVVVAST 310 (406)
Q Consensus 301 ~vPv~V~aes 310 (406)
++|+++++..
T Consensus 80 ~~~ii~ls~~ 89 (140)
T 2qr3_A 80 DLPVVLFTAY 89 (140)
T ss_dssp TCCEEEEEEG
T ss_pred CCCEEEEECC
Confidence 7999998754
No 340
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}
Probab=38.02 E-value=87 Score=27.43 Aligned_cols=99 Identities=12% Similarity=0.097 Sum_probs=56.4
Q ss_pred CcEEEeccChHHHHHHHHHHHHcCCc-eEEEEecCCCCcchHHHHHHHHhCCCceEEE--cc-hHHHHHhhcCCEEEEcc
Q 045642 200 NEVILTLGHSKFVKEFLCAAKEKKRS-FEVFIADGAPKFEGHILAKELDKKGLKAIVI--TD-SAVFAMISRVNMVIVGV 275 (406)
Q Consensus 200 g~~ILT~g~S~tV~~~L~~A~~~~~~-f~ViV~EsrP~~eG~~~a~~L~~~GI~vt~I--~D-sav~~~m~~vd~VllGA 275 (406)
..+||..|.++.+=..|..... .+. ++|+++.-+|... ..+...++.+... .| .++..++..+|.||.-|
T Consensus 23 mk~vlVtGatG~iG~~l~~~L~-~~G~~~V~~~~R~~~~~-----~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vv~~a 96 (236)
T 3qvo_A 23 MKNVLILGAGGQIARHVINQLA-DKQTIKQTLFARQPAKI-----HKPYPTNSQIIMGDVLNHAALKQAMQGQDIVYANL 96 (236)
T ss_dssp CEEEEEETTTSHHHHHHHHHHT-TCTTEEEEEEESSGGGS-----CSSCCTTEEEEECCTTCHHHHHHHHTTCSEEEEEC
T ss_pred ccEEEEEeCCcHHHHHHHHHHH-hCCCceEEEEEcChhhh-----cccccCCcEEEEecCCCHHHHHHHhcCCCEEEEcC
Confidence 3578888988877776666552 333 7888876554311 1111223322211 22 35666777787776533
Q ss_pred eeEeeCCCcccccchHHHHHHHhhCCCceEEecCC
Q 045642 276 HAVMANGGVIAPAGLHVLALAAKKHDVPFVVVAST 310 (406)
Q Consensus 276 dav~~nG~vvnk~GT~~lAl~Ak~~~vPv~V~aes 310 (406)
|..-...++-.++-+++..+++-+|...+
T Consensus 97 ------~~~~~~~~~~~~~~~~~~~~~~~iV~iSS 125 (236)
T 3qvo_A 97 ------TGEDLDIQANSVIAAMKACDVKRLIFVLS 125 (236)
T ss_dssp ------CSTTHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred ------CCCchhHHHHHHHHHHHHcCCCEEEEEec
Confidence 22222345667777888888876665554
No 341
>2oat_A Ornithine aminotransferase; 5-fluoromethylornithine, PLP-dependent ENZ pyridoxal phosphate; HET: PFM; 1.95A {Homo sapiens} SCOP: c.67.1.4 PDB: 1oat_A* 2byj_A* 2byl_A* 1gbn_A* 2can_A*
Probab=38.01 E-value=2.4e+02 Score=27.33 Aligned_cols=106 Identities=18% Similarity=0.203 Sum_probs=55.9
Q ss_pred cccCcEEEeccChHHHHHHHHHHHH---------cCCceEEEEecCCCCcchHH-HHHHHHh-----CC-----CceEEE
Q 045642 197 IHQNEVILTLGHSKFVKEFLCAAKE---------KKRSFEVFIADGAPKFEGHI-LAKELDK-----KG-----LKAIVI 256 (406)
Q Consensus 197 I~~g~~ILT~g~S~tV~~~L~~A~~---------~~~~f~ViV~EsrP~~eG~~-~a~~L~~-----~G-----I~vt~I 256 (406)
.....+++|.|.+..+...++.+.+ .| +-+|++.+ |.+.|.. .+..+.. .| ..+..+
T Consensus 131 ~g~~~v~~~~sGseA~~~al~~~~~~~~~~~g~~~g-~~~vi~~~--~~yhg~~~~~~~~~g~~~~~~~~~p~~~~v~~~ 207 (439)
T 2oat_A 131 FNYHKVLPMNTGVEAGETACKLARKWGYTVKGIQKY-KAKIVFAA--GNFWGRTLSAISSSTDPTSYDGFGPFMPGFDII 207 (439)
T ss_dssp HTCSEEEEESSHHHHHHHHHHHHHHHHHHTTCCCTT-CCEEEEET--TCCCCSSHHHHTTCCCHHHHTTSCSCCTTEEEE
T ss_pred cCCCEEEEeCCHHHHHHHHHHHHHHHhhhccCCCCC-CCeEEEEc--CCCCCCCHhHhhcCCChhcccCCCCCCCCeEEe
Confidence 3344577888888888888877652 12 24677765 5555532 2222211 11 345555
Q ss_pred c--c-hHHHHHhhcCC-EEEEcceeEeeCCCccc-ccch-HHHHHHHhhCCCceEE
Q 045642 257 T--D-SAVFAMISRVN-MVIVGVHAVMANGGVIA-PAGL-HVLALAAKKHDVPFVV 306 (406)
Q Consensus 257 ~--D-sav~~~m~~vd-~VllGAdav~~nG~vvn-k~GT-~~lAl~Ak~~~vPv~V 306 (406)
+ | .++-..+..-+ ++|+ ++-+..+||++. .-+- ..++-+|++|++++++
T Consensus 208 ~~~d~~~le~~l~~~~~~~vi-~ep~~~~~G~~~~~~~~l~~l~~l~~~~gillI~ 262 (439)
T 2oat_A 208 PYNDLPALERALQDPNVAAFM-VEPIQGEAGVVVPDPGYLMGVRELCTRHQVLFIA 262 (439)
T ss_dssp CSSCHHHHHHHTTSTTEEEEE-ECSSBTTTTSBCCCTTHHHHHHHHHHHTTCEEEE
T ss_pred CCCCHHHHHHHhCCCCEEEEE-EECCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEE
Confidence 3 3 23344442112 3333 445555555432 2222 3466789999998876
No 342
>4ggj_A Mitochondrial cardiolipin hydrolase; piRNA pathway, protein-RNA interactions, piRNA RNAI, HKD MOT zinc finger, nuclease, nucleic acid binding; 1.75A {Mus musculus} PDB: 4ggk_A
Probab=37.98 E-value=35 Score=29.91 Aligned_cols=49 Identities=12% Similarity=-0.041 Sum_probs=32.3
Q ss_pred hHHHHHHHHHHHHcCCceEEEEecCCCCcchHHHHHHHHhCCCceEEEcc
Q 045642 209 SKFVKEFLCAAKEKKRSFEVFIADGAPKFEGHILAKELDKKGLKAIVITD 258 (406)
Q Consensus 209 S~tV~~~L~~A~~~~~~f~ViV~EsrP~~eG~~~a~~L~~~GI~vt~I~D 258 (406)
+..+...|..|+++|.+.+|++-... ..........|.+.||+|.....
T Consensus 71 ~~~i~~aL~~aa~rGV~Vrii~D~~~-~~~~~~~~~~l~~~gi~v~~~~~ 119 (196)
T 4ggj_A 71 SPQLGRAVQLLHQRGVRVRVITDCDY-MALNGSQIGLLRKAGIQVRHDQD 119 (196)
T ss_dssp CHHHHHHHHHHHHTTCEEEEEESSCC-C---CCHHHHHHHTTCEEEECCS
T ss_pred CHHHHHHHHHHHHcCCcEEEEEeccc-ccccHHHHHHHHhcCCCcccccc
Confidence 45677888888888888888763222 22222346788999999876543
No 343
>3e9k_A Kynureninase; kynurenine-L-hydrolase, kynurenine hydrolase, pyridoxal-5'-phosphate, inhibitor complex, 3-hydroxy hippur hydroxyhippuric acid, PLP; HET: PLP 3XH; 1.70A {Homo sapiens} PDB: 2hzp_A*
Probab=37.98 E-value=2.4e+02 Score=27.19 Aligned_cols=102 Identities=12% Similarity=0.206 Sum_probs=53.6
Q ss_pred cCcEEEeccChHHHHHHHHHHHHcC-CceEEEEecCCCCcchHH--HHHHHHhCCCce-----EEEcc--------hHHH
Q 045642 199 QNEVILTLGHSKFVKEFLCAAKEKK-RSFEVFIADGAPKFEGHI--LAKELDKKGLKA-----IVITD--------SAVF 262 (406)
Q Consensus 199 ~g~~ILT~g~S~tV~~~L~~A~~~~-~~f~ViV~EsrP~~eG~~--~a~~L~~~GI~v-----t~I~D--------sav~ 262 (406)
...+++|-|.+..+..++....+.+ .+-+|++. .|.+.+.. +...+...|+.+ .+++. ..+-
T Consensus 128 ~~~v~~t~g~t~al~~~~~~~~~~~~~~~~Vl~~--~~~~~s~~~~~~~~~~~~G~~~~~~~v~~~~~~~~~~~d~~~l~ 205 (465)
T 3e9k_A 128 EKEIALMNALTVNLHLLMLSFFKPTPKRYKILLE--AKAFPSDHYAIESQLQLHGLNIEESMRMIKPREGEETLRIEDIL 205 (465)
T ss_dssp GGGEEECSCHHHHHHHHHHHHCCCCSSSCEEEEE--TTCCHHHHHHHHHHHHHTTCCHHHHEEEECCCTTCSSCCHHHHH
T ss_pred cCCEEEECCHHHHHHHHHHHhccccCCCCEEEEc--CCcCCchHHHHHHHHHHcCCcceeeeEEEecCCCCCccCHHHHH
Confidence 3467777776666666666654333 33445554 35565532 233455678764 33332 2344
Q ss_pred HHhh----cCCEEEEcceeEeeCCCcccccchHHHHHHHhhCCCceEE
Q 045642 263 AMIS----RVNMVIVGVHAVMANGGVIAPAGLHVLALAAKKHDVPFVV 306 (406)
Q Consensus 263 ~~m~----~vd~VllGAdav~~nG~vvnk~GT~~lAl~Ak~~~vPv~V 306 (406)
..+. ++ ++|+-...=...|.+. .+ ..++-+|+.++++|++
T Consensus 206 ~~i~~~~~~~-~lv~~~~~~n~tG~~~-~l--~~i~~la~~~g~~vi~ 249 (465)
T 3e9k_A 206 EVIEKEGDSI-AVILFSGVHFYTGQHF-NI--PAITKAGQAKGCYVGF 249 (465)
T ss_dssp HHHHHHGGGE-EEEEEESBCTTTCBBC-CH--HHHHHHHHHTTCEEEE
T ss_pred HHHHhcCCCe-EEEEEeCcccCcceee-cH--HHHHHHHHHcCCEEEE
Confidence 4443 33 3333332222334333 32 5677889999998876
No 344
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=37.93 E-value=18 Score=30.89 Aligned_cols=29 Identities=17% Similarity=0.184 Sum_probs=16.7
Q ss_pred eEEEEecCCCCcchHHHHHHHHhCCCceEEE
Q 045642 226 FEVFIADGAPKFEGHILAKELDKKGLKAIVI 256 (406)
Q Consensus 226 f~ViV~EsrP~~eG~~~a~~L~~~GI~vt~I 256 (406)
+.|.|+-+.|- |..+|..|++.|++|+++
T Consensus 3 ~dV~IIGaGpa--GL~aA~~La~~G~~V~v~ 31 (336)
T 3kkj_A 3 VPIAIIGTGIA--GLSAAQALTAAGHQVHLF 31 (336)
T ss_dssp CCEEEECCSHH--HHHHHHHHHHTTCCEEEE
T ss_pred CCEEEECcCHH--HHHHHHHHHHCCCCEEEE
Confidence 34555544443 556666666666666665
No 345
>3cg4_A Response regulator receiver domain protein (CHEY-; structural genomics, unknown function; HET: MSE; 1.61A {Methanospirillum hungatei jf-1}
Probab=37.87 E-value=1.1e+02 Score=23.56 Aligned_cols=79 Identities=11% Similarity=0.228 Sum_probs=46.6
Q ss_pred CceEEEEecCCCCcchHHHHHHHHhCCCceEEEcchHHH-HHhh--cCCEEEEcceeEeeCCCcccccchHHHHHHHh--
Q 045642 224 RSFEVFIADGAPKFEGHILAKELDKKGLKAIVITDSAVF-AMIS--RVNMVIVGVHAVMANGGVIAPAGLHVLALAAK-- 298 (406)
Q Consensus 224 ~~f~ViV~EsrP~~eG~~~a~~L~~~GI~vt~I~Dsav~-~~m~--~vd~VllGAdav~~nG~vvnk~GT~~lAl~Ak-- 298 (406)
.+.+|.++|..|.. ...+...|...|+.|....+..-+ ..+. ..|.||+..+. . ..-|.-.+..+.+
T Consensus 6 ~~~~iLivdd~~~~-~~~l~~~L~~~g~~v~~~~~~~~a~~~l~~~~~dlii~d~~l--~-----~~~g~~~~~~l~~~~ 77 (142)
T 3cg4_A 6 HKGDVMIVDDDAHV-RIAVKTILSDAGFHIISADSGGQCIDLLKKGFSGVVLLDIMM--P-----GMDGWDTIRAILDNS 77 (142)
T ss_dssp CCCEEEEECSCHHH-HHHHHHHHHHTTCEEEEESSHHHHHHHHHTCCCEEEEEESCC--S-----SSCHHHHHHHHHHTT
T ss_pred CCCeEEEEcCCHHH-HHHHHHHHHHCCeEEEEeCCHHHHHHHHHhcCCCEEEEeCCC--C-----CCCHHHHHHHHHhhc
Confidence 45678888876542 235666777788888776664322 2232 36777776542 1 2234444444443
Q ss_pred -hCCCceEEecCC
Q 045642 299 -KHDVPFVVVAST 310 (406)
Q Consensus 299 -~~~vPv~V~aes 310 (406)
...+||++++..
T Consensus 78 ~~~~~pii~~s~~ 90 (142)
T 3cg4_A 78 LEQGIAIVMLTAK 90 (142)
T ss_dssp CCTTEEEEEEECT
T ss_pred ccCCCCEEEEECC
Confidence 356899998764
No 346
>1vgv_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, isomerase; HET: UD1; 2.31A {Escherichia coli} SCOP: c.87.1.3 PDB: 1f6d_A*
Probab=37.84 E-value=1.1e+02 Score=28.59 Aligned_cols=70 Identities=9% Similarity=0.097 Sum_probs=40.9
Q ss_pred cCCceEEEEecCCCCcchHHHHHHHHhCCCceEE---EcchHHHHHhhcCCEEEEcceeEeeCCCcccccchHHHHHHHh
Q 045642 222 KKRSFEVFIADGAPKFEGHILAKELDKKGLKAIV---ITDSAVFAMISRVNMVIVGVHAVMANGGVIAPAGLHVLALAAK 298 (406)
Q Consensus 222 ~~~~f~ViV~EsrP~~eG~~~a~~L~~~GI~vt~---I~Dsav~~~m~~vd~VllGAdav~~nG~vvnk~GT~~lAl~Ak 298 (406)
+..++++++... |..+-+...+++....=+|++ +...-+..+|..+|.+++.. |++ .+=|-
T Consensus 235 ~~~~~~l~i~~g-~~~~~~~~l~~~~~~~~~v~~~g~~~~~~~~~~~~~ad~~v~~S------g~~---------~lEA~ 298 (384)
T 1vgv_A 235 THQDIQIVYPVH-LNPNVREPVNRILGHVKNVILIDPQEYLPFVWLMNHAWLILTDS------GGI---------QEEAP 298 (384)
T ss_dssp HCTTEEEEEECC-BCHHHHHHHHHHHTTCTTEEEECCCCHHHHHHHHHHCSEEEESS------STG---------GGTGG
T ss_pred hCCCeEEEEEcC-CCHHHHHHHHHHhhcCCCEEEeCCCCHHHHHHHHHhCcEEEECC------cch---------HHHHH
Confidence 345677776422 221112333333222125776 44567889999999988764 332 34567
Q ss_pred hCCCceEEe
Q 045642 299 KHDVPFVVV 307 (406)
Q Consensus 299 ~~~vPv~V~ 307 (406)
.+|+||++.
T Consensus 299 a~G~PvI~~ 307 (384)
T 1vgv_A 299 SLGKPVLVM 307 (384)
T ss_dssp GGTCCEEEE
T ss_pred HcCCCEEEc
Confidence 789999975
No 347
>3i16_A Aluminum resistance protein; YP_878183.1, carbon-sulfur lyase involved in aluminum resist structural genomics; HET: MSE TLA PLP; 2.00A {Clostridium novyi} PDB: 3gwp_A*
Probab=37.80 E-value=96 Score=30.63 Aligned_cols=95 Identities=12% Similarity=0.089 Sum_probs=54.0
Q ss_pred eccChHHHHHHHHHHHHcCCceEEEEecCCCCcch-HHHH--------HHHHhCCCceEEEcc--------hHHHHHhh-
Q 045642 205 TLGHSKFVKEFLCAAKEKKRSFEVFIADGAPKFEG-HILA--------KELDKKGLKAIVITD--------SAVFAMIS- 266 (406)
Q Consensus 205 T~g~S~tV~~~L~~A~~~~~~f~ViV~EsrP~~eG-~~~a--------~~L~~~GI~vt~I~D--------sav~~~m~- 266 (406)
|.|.+..+..+|....+.| -+|++.+ .|.+.| ..+. ..+...|+.+..++- ..+...+.
T Consensus 97 ~~sGt~Ai~~al~all~pG--D~Vl~~~-~~~y~~~~~~~g~~~~~~~~~l~~~G~~~~~v~~~~~g~~D~e~l~~~l~~ 173 (427)
T 3i16_A 97 FVNGTHALGAALFGNLRPG--NTMLSVC-GEPYDTLHDVIGITENSNMGSLKEFGINYKQVDLKEDGKPNLEEIEKVLKE 173 (427)
T ss_dssp CCSHHHHHHHHHHHHCCTT--CEEEESS-SSCCGGGHHHHTCSCCCSSCCTGGGTCEEEECCCCTTSSCCHHHHHHHHHT
T ss_pred CccHHHHHHHHHHHHhCCC--CEEEEeC-CCccHHHHHHHhccccchHHHHHHcCCEEEEecCccCCCcCHHHHHHHhhC
Confidence 5565655555555544333 3555554 355555 3344 556778999888753 34444454
Q ss_pred --cCCEEEEcceeEeeCCCcccccchH----HHHHHHhh--CCCceEE
Q 045642 267 --RVNMVIVGVHAVMANGGVIAPAGLH----VLALAAKK--HDVPFVV 306 (406)
Q Consensus 267 --~vd~VllGAdav~~nG~vvnk~GT~----~lAl~Ak~--~~vPv~V 306 (406)
+...|++... -|..-|..|+. .++-+|+. ++++|+|
T Consensus 174 ~~~tklV~i~~s----~~~p~nptg~i~dl~~i~~la~~~~~g~~liv 217 (427)
T 3i16_A 174 DESITLVHIQRS----TGYGWRRALLIEDIKSIVDCVKNIRKDIICFV 217 (427)
T ss_dssp CTTEEEEEEECS----CCSSSSCCCCHHHHHHHHHHHHHHCTTSEEEE
T ss_pred CCCCEEEEEEcC----CCCCCCCcccHHHHHHHHHHHHHhCCCCEEEE
Confidence 3334443321 13356676763 46677888 8998886
No 348
>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*
Probab=37.67 E-value=24 Score=33.10 Aligned_cols=107 Identities=14% Similarity=0.035 Sum_probs=52.3
Q ss_pred CcEEEeccChHHHHHHHHHHHHcCCceEEEEecCCCCcchHHHHHHHHhCCCceEEE-cchHHHHHhhcCCEEEEcceeE
Q 045642 200 NEVILTLGHSKFVKEFLCAAKEKKRSFEVFIADGAPKFEGHILAKELDKKGLKAIVI-TDSAVFAMISRVNMVIVGVHAV 278 (406)
Q Consensus 200 g~~ILT~g~S~tV~~~L~~A~~~~~~f~ViV~EsrP~~eG~~~a~~L~~~GI~vt~I-~Dsav~~~m~~vd~VllGAdav 278 (406)
+.+||+.|.++.+=..|.....+ +..+|+++...+...-.. ...+.. +-.+.++ .|-. -..+.++|.||--|-..
T Consensus 27 ~~~vlVtGatG~iG~~l~~~L~~-~g~~V~~~~r~~~~~~~~-~~~~~~-~~~~~~~~~D~~-~~~~~~~d~vih~A~~~ 102 (343)
T 2b69_A 27 RKRILITGGAGFVGSHLTDKLMM-DGHEVTVVDNFFTGRKRN-VEHWIG-HENFELINHDVV-EPLYIEVDQIYHLASPA 102 (343)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHH-TTCEEEEEECCSSCCGGG-TGGGTT-CTTEEEEECCTT-SCCCCCCSEEEECCSCC
T ss_pred CCEEEEEcCccHHHHHHHHHHHH-CCCEEEEEeCCCccchhh-hhhhcc-CCceEEEeCccC-ChhhcCCCEEEECcccc
Confidence 56788888887776666544322 236788776443221111 111111 1223333 2211 01133455444433211
Q ss_pred eeC---C-----CcccccchHHHHHHHhhCCCceEEecCC
Q 045642 279 MAN---G-----GVIAPAGLHVLALAAKKHDVPFVVVAST 310 (406)
Q Consensus 279 ~~n---G-----~vvnk~GT~~lAl~Ak~~~vPv~V~aes 310 (406)
... . --+|-.||..++-+|+..++.|+.++..
T Consensus 103 ~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~SS~ 142 (343)
T 2b69_A 103 SPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGARLLLASTS 142 (343)
T ss_dssp SHHHHTTCHHHHHHHHHHHHHHHHHHHHHHTCEEEEEEEG
T ss_pred CchhhhhCHHHHHHHHHHHHHHHHHHHHHhCCcEEEECcH
Confidence 000 0 0135678889998999888877766543
No 349
>1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2
Probab=37.62 E-value=84 Score=29.39 Aligned_cols=108 Identities=17% Similarity=0.014 Sum_probs=53.0
Q ss_pred cEEEeccChHHHHHHHHHH-HHcCCceEEEEecCCCCcchHHHHHHHHh----CCCceEEE-cc----hHHHHHhhc--C
Q 045642 201 EVILTLGHSKFVKEFLCAA-KEKKRSFEVFIADGAPKFEGHILAKELDK----KGLKAIVI-TD----SAVFAMISR--V 268 (406)
Q Consensus 201 ~~ILT~g~S~tV~~~L~~A-~~~~~~f~ViV~EsrP~~eG~~~a~~L~~----~GI~vt~I-~D----sav~~~m~~--v 268 (406)
.+||..|.++.+=..|... .++| .+|+++.-++......-...|.+ .+-.+.++ .| .++..++.. +
T Consensus 2 ~~vlVtGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~ 79 (372)
T 1db3_A 2 KVALITGVTGQDGSYLAEFLLEKG--YEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREVQP 79 (372)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT--CEEEEECC---------------------CCEEECCCCSSCHHHHHHHHHHHCC
T ss_pred CEEEEECCCChHHHHHHHHHHHCC--CEEEEEECCCcccchHHHHHHhhccccCCCceEEEECCCCCHHHHHHHHHhcCC
Confidence 4678888877776655443 3334 68888765543211111122221 12234333 22 345556664 5
Q ss_pred CEEEEcceeEeeCCC--------cccccchHHHHHHHhhCCC---ceEEecCC
Q 045642 269 NMVIVGVHAVMANGG--------VIAPAGLHVLALAAKKHDV---PFVVVAST 310 (406)
Q Consensus 269 d~VllGAdav~~nG~--------vvnk~GT~~lAl~Ak~~~v---Pv~V~aes 310 (406)
|.||--|-....+.. -+|-.||..+.-+|+.+++ +-+|.+.+
T Consensus 80 d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~iv~~SS 132 (372)
T 1db3_A 80 DEVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFLGLEKKTRFYQAST 132 (372)
T ss_dssp SEEEECCCCCTTTTTTSCHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEE
T ss_pred CEEEECCcccCccccccCHHHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEeCC
Confidence 777765532211111 1356799999999999887 44444433
No 350
>2fnu_A Aminotransferase; protein-product complex, structural genomics, montreal-kings bacterial structural genomics initiative, BSGI; HET: PMP UD1; 1.50A {Helicobacter pylori} SCOP: c.67.1.4 PDB: 2fni_A* 2fn6_A*
Probab=37.50 E-value=40 Score=31.44 Aligned_cols=99 Identities=14% Similarity=0.187 Sum_probs=53.4
Q ss_pred hcccCcEEEeccChHHHHHHHHHH---HHcCCceEEEEecCCCCcchHHHHHHHHhCCCceEEEcch--------HHHHH
Q 045642 196 LIHQNEVILTLGHSKFVKEFLCAA---KEKKRSFEVFIADGAPKFEGHILAKELDKKGLKAIVITDS--------AVFAM 264 (406)
Q Consensus 196 ~I~~g~~ILT~g~S~tV~~~L~~A---~~~~~~f~ViV~EsrP~~eG~~~a~~L~~~GI~vt~I~Ds--------av~~~ 264 (406)
++.-..+++|.|.+..+..++..+ .+.| -+|++. .|.+.+...+ +...|+++..++-. .+-..
T Consensus 44 ~~~~~~v~~~~ggt~al~~~~~~~~~~~~~g--d~Vl~~--~~~~~~~~~~--~~~~g~~~~~~~~~~~~~~d~~~l~~~ 117 (375)
T 2fnu_A 44 FLGVKHALVFNSATSALLTLYRNFSEFSADR--NEIITT--PISFVATANM--LLESGYTPVFAGIKNDGNIDELALEKL 117 (375)
T ss_dssp HHTCSEEEEESCHHHHHHHHHHHSSCCCTTS--CEEEEC--SSSCTHHHHH--HHHTTCEEEECCBCTTSSBCGGGSGGG
T ss_pred HhCCCeEEEeCCHHHHHHHHHHHhcccCCCC--CEEEEC--CCccHhHHHH--HHHCCCEEEEeccCCCCCCCHHHHHhh
Confidence 333336777777777777676665 3233 355554 4666664333 33478888777521 11111
Q ss_pred hhcCCEEEEcceeEeeCCCcccccchHHHHHHHhhCCCceEE
Q 045642 265 ISRVNMVIVGVHAVMANGGVIAPAGLHVLALAAKKHDVPFVV 306 (406)
Q Consensus 265 m~~vd~VllGAdav~~nG~vvnk~GT~~lAl~Ak~~~vPv~V 306 (406)
+..-.++|+-++. .|.+. . -..++-+|+++++++++
T Consensus 118 i~~~~~~v~~~~~---tG~~~-~--l~~i~~l~~~~~~~li~ 153 (375)
T 2fnu_A 118 INERTKAIVSVDY---AGKSV-E--VESVQKLCKKHSLSFLS 153 (375)
T ss_dssp CCTTEEEEEEECG---GGCCC-C--HHHHHHHHHHHTCEEEE
T ss_pred cCcCceEEEEeCC---cCCcc-C--HHHHHHHHHHcCCEEEE
Confidence 2111233333332 34332 2 25677788889998876
No 351
>3ot5_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta; HET: PGE; 2.20A {Listeria monocytogenes}
Probab=37.50 E-value=2.4e+02 Score=27.18 Aligned_cols=70 Identities=13% Similarity=0.050 Sum_probs=39.9
Q ss_pred cCCceEEEEecCCCCcchHHHHHHHHhCCCceEEEcc---hHHHHHhhcCCEEEEcceeEeeCCCcccccchHHHHHHHh
Q 045642 222 KKRSFEVFIADGAPKFEGHILAKELDKKGLKAIVITD---SAVFAMISRVNMVIVGVHAVMANGGVIAPAGLHVLALAAK 298 (406)
Q Consensus 222 ~~~~f~ViV~EsrP~~eG~~~a~~L~~~GI~vt~I~D---sav~~~m~~vd~VllGAdav~~nG~vvnk~GT~~lAl~Ak 298 (406)
+..++++++.- .|+..-+..++++....-++.++.- .-+..+|+.+|.|+..+ |+.+ +=|-
T Consensus 254 ~~~~~~~v~~~-~~~~~~~~~l~~~~~~~~~v~l~~~l~~~~~~~l~~~ad~vv~~S-------------Gg~~--~EA~ 317 (403)
T 3ot5_A 254 SREDTELVYPM-HLNPAVREKAMAILGGHERIHLIEPLDAIDFHNFLRKSYLVFTDS-------------GGVQ--EEAP 317 (403)
T ss_dssp HCTTEEEEEEC-CSCHHHHHHHHHHHTTCTTEEEECCCCHHHHHHHHHHEEEEEECC-------------HHHH--HHGG
T ss_pred hCCCceEEEec-CCCHHHHHHHHHHhCCCCCEEEeCCCCHHHHHHHHHhcCEEEECC-------------ccHH--HHHH
Confidence 34567766652 2322223333432222225665542 26788999999876331 5444 6777
Q ss_pred hCCCceEEe
Q 045642 299 KHDVPFVVV 307 (406)
Q Consensus 299 ~~~vPv~V~ 307 (406)
.+|+|+++.
T Consensus 318 a~g~PvV~~ 326 (403)
T 3ot5_A 318 GMGVPVLVL 326 (403)
T ss_dssp GTTCCEEEC
T ss_pred HhCCCEEEe
Confidence 899999986
No 352
>2xci_A KDO-transferase, 3-deoxy-D-manno-2-octulosonic acid transferase; KDTA, GSEA, glycosyltransferase superfamily B,; HET: PG4; 2.00A {Aquifex aeolicus} PDB: 2xcu_A*
Probab=37.49 E-value=1.1e+02 Score=29.22 Aligned_cols=75 Identities=17% Similarity=0.274 Sum_probs=46.4
Q ss_pred cCCceEEEEecCCCCcchHHHHHHHHhCCCce---------EEEcc--hHHHHHhhcCCEEEEcceeEeeCCCcccccch
Q 045642 222 KKRSFEVFIADGAPKFEGHILAKELDKKGLKA---------IVITD--SAVFAMISRVNMVIVGVHAVMANGGVIAPAGL 290 (406)
Q Consensus 222 ~~~~f~ViV~EsrP~~eG~~~a~~L~~~GI~v---------t~I~D--sav~~~m~~vd~VllGAdav~~nG~vvnk~GT 290 (406)
+..+++++++-..|.. ...+.+.+.+.|+.. .++.| .-+..++..+|.++++... ...|+.
T Consensus 222 ~~p~~~lvivG~g~~~-~~~l~~~~~~~gl~~~~~~~~~~~v~~~~~~~dl~~~y~~aDv~vl~ss~-~e~gg~------ 293 (374)
T 2xci_A 222 TYSSLKLILVPRHIEN-AKIFEKKARDFGFKTSFFENLEGDVILVDRFGILKELYPVGKIAIVGGTF-VNIGGH------ 293 (374)
T ss_dssp TCTTCEEEEEESSGGG-HHHHHHHHHHTTCCEEETTCCCSSEEECCSSSCHHHHGGGEEEEEECSSS-SSSCCC------
T ss_pred hCCCcEEEEECCCHHH-HHHHHHHHHHCCCceEEecCCCCcEEEECCHHHHHHHHHhCCEEEECCcc-cCCCCc------
Confidence 3446777777544432 124555666778763 35555 6788999999998886432 122321
Q ss_pred HHHHHHHhhCCCceEE
Q 045642 291 HVLALAAKKHDVPFVV 306 (406)
Q Consensus 291 ~~lAl~Ak~~~vPv~V 306 (406)
..+=|-..|+||++
T Consensus 294 --~~lEAmA~G~PVI~ 307 (374)
T 2xci_A 294 --NLLEPTCWGIPVIY 307 (374)
T ss_dssp --CCHHHHTTTCCEEE
T ss_pred --CHHHHHHhCCCEEE
Confidence 13556778999995
No 353
>1xi9_A Putative transaminase; alanine aminotransferase, southeast collaboratory for structural genomics, secsg; HET: PLP; 2.33A {Pyrococcus furiosus} SCOP: c.67.1.1
Probab=37.33 E-value=2.1e+02 Score=26.94 Aligned_cols=94 Identities=15% Similarity=0.203 Sum_probs=51.3
Q ss_pred cCcEEEeccChHHHHHHHHHHHHcCCceEEEEecCCCCcchHHHHHHHHhCCCceEEEcch----------HHHHHhh-c
Q 045642 199 QNEVILTLGHSKFVKEFLCAAKEKKRSFEVFIADGAPKFEGHILAKELDKKGLKAIVITDS----------AVFAMIS-R 267 (406)
Q Consensus 199 ~g~~ILT~g~S~tV~~~L~~A~~~~~~f~ViV~EsrP~~eG~~~a~~L~~~GI~vt~I~Ds----------av~~~m~-~ 267 (406)
...+++|.|.+..+..++..+.+.| -+|++. .|.+.|.. ..+...|+++..++-. .+-..+. +
T Consensus 101 ~~~v~~t~g~~~al~~~~~~l~~~g--d~Vl~~--~~~~~~~~--~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~ 174 (406)
T 1xi9_A 101 PDDVRVTAAVTEALQLIFGALLDPG--DEILVP--GPSYPPYT--GLVKFYGGKPVEYRTIEEEDWQPDIDDIRKKITDR 174 (406)
T ss_dssp GGGEEEESHHHHHHHHHHHHHCCTT--CEEEEE--ESCCHHHH--HHHHHTTCEEEEEEEEGGGTSEECHHHHHHHCCTT
T ss_pred HHHEEEcCChHHHHHHHHHHhCCCC--CEEEEc--CCCCccHH--HHHHHcCCEEEEeecCCCcCCcCCHHHHHHhhCcC
Confidence 4467888777777777776664333 355554 35566633 2334578877766421 1222222 2
Q ss_pred CCEEEEcceeEeeCCCcccccch-------HHHHHHHhhCCCceEE
Q 045642 268 VNMVIVGVHAVMANGGVIAPAGL-------HVLALAAKKHDVPFVV 306 (406)
Q Consensus 268 vd~VllGAdav~~nG~vvnk~GT-------~~lAl~Ak~~~vPv~V 306 (406)
+..|++ . ..-|..|. ..++-+|+.+++++++
T Consensus 175 ~~~v~i------~--~p~nptG~~~~~~~l~~i~~~a~~~~~~li~ 212 (406)
T 1xi9_A 175 TKAIAV------I--NPNNPTGALYDKKTLEEILNIAGEYEIPVIS 212 (406)
T ss_dssp EEEEEE------E--SSCTTTCCCCCHHHHHHHHHHHHHHTCCEEE
T ss_pred ceEEEE------E--CCCCCCCCCcCHHHHHHHHHHHHHcCCEEEE
Confidence 222222 1 22344553 4566778889998876
No 354
>1mdo_A ARNB aminotransferase; type 1 aminotransferase fold; HET: MSE PMP; 1.70A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1mdx_A* 1mdz_A*
Probab=37.01 E-value=84 Score=29.47 Aligned_cols=102 Identities=15% Similarity=0.147 Sum_probs=56.2
Q ss_pred HHHhcccCcEEEeccChHHHHHHHHHH-HHcCCceEEEEecCCCCcchHHHHHHHHhCCCceEEEcc---------hHHH
Q 045642 193 AMELIHQNEVILTLGHSKFVKEFLCAA-KEKKRSFEVFIADGAPKFEGHILAKELDKKGLKAIVITD---------SAVF 262 (406)
Q Consensus 193 a~~~I~~g~~ILT~g~S~tV~~~L~~A-~~~~~~f~ViV~EsrP~~eG~~~a~~L~~~GI~vt~I~D---------sav~ 262 (406)
.++++....+++|-|.+..+..++..+ .+.| -+|++. .|.+.+.. ..+...|+++..++- ..+-
T Consensus 48 la~~~~~~~~~~~~~gt~al~~~~~~~~~~~g--d~Vl~~--~~~~~~~~--~~~~~~g~~~~~v~~~~~~~~~d~~~l~ 121 (393)
T 1mdo_A 48 FCRLTGNQYAVAVSSATAGMHIALMALGIGEG--DEVITP--SMTWVSTL--NMIVLLGANPVMVDVDRDTLMVTPEHIE 121 (393)
T ss_dssp HHHHHCCSEEEEESCHHHHHHHHHHHTTCCTT--CEEEEE--SSSCHHHH--HHHHHTTCEEEEECBCTTTCCBCHHHHH
T ss_pred HHHHhCCCcEEEecChHHHHHHHHHHcCCCCC--CEEEeC--CCccHhHH--HHHHHCCCEEEEEeccCCcCCCCHHHHH
Confidence 334554456778777666666666655 3233 355554 45566642 344567988887752 1222
Q ss_pred HHhhcCCEEEEcceeEeeCCCcccccchHHHHHHHhhCCCceEE
Q 045642 263 AMISRVNMVIVGVHAVMANGGVIAPAGLHVLALAAKKHDVPFVV 306 (406)
Q Consensus 263 ~~m~~vd~VllGAdav~~nG~vvnk~GT~~lAl~Ak~~~vPv~V 306 (406)
..+..-.++|+-.. ..|.+ ..-..++-+|+++++++++
T Consensus 122 ~~l~~~~~~v~~~~---~~G~~---~~~~~i~~l~~~~~~~li~ 159 (393)
T 1mdo_A 122 AAITPQTKAIIPVH---YAGAP---ADLDAIYALGERYGIPVIE 159 (393)
T ss_dssp HHCCTTEEEECCBC---GGGCC---CCHHHHHHHHHHHTCCBCE
T ss_pred HhcCCCceEEEEeC---CCCCc---CCHHHHHHHHHHcCCeEEE
Confidence 33322123333222 23433 2346677788899988876
No 355
>3ua3_A Protein arginine N-methyltransferase 5; TIM-barrel, rossmann fold, beta-barrel, symmetric arginine dimethylase, SAM binding; HET: SAH; 3.00A {Caenorhabditis elegans} PDB: 3ua4_A
Probab=37.00 E-value=59 Score=34.87 Aligned_cols=85 Identities=14% Similarity=0.167 Sum_probs=48.0
Q ss_pred HHHHHHHHHhccc---CcEEEeccChHHHH--HHHHHHHHcC---------CceEEEEecCCCCcchHHHHHHHHhCC--
Q 045642 187 EGIAEQAMELIHQ---NEVILTLGHSKFVK--EFLCAAKEKK---------RSFEVFIADGAPKFEGHILAKELDKKG-- 250 (406)
Q Consensus 187 ~~I~~~a~~~I~~---g~~ILT~g~S~tV~--~~L~~A~~~~---------~~f~ViV~EsrP~~eG~~~a~~L~~~G-- 250 (406)
+.|.....+++.+ +.+||..|..+-++ ..|..++..| +..+||.+|..|...- .++.....|
T Consensus 394 ~AI~~al~d~~~~~~~~~VVldVGaGtGpLs~~al~A~~~a~~~~~~~~~~~~~kVyAVEknp~A~~--~l~~~~~Ng~~ 471 (745)
T 3ua3_A 394 EAVVGALKDLGADGRKTVVIYLLGGGRGPIGTKILKSEREYNNTFRQGQESLKVKLYIVEKNPNAIV--TLKYMNVRTWK 471 (745)
T ss_dssp HHHHHHHHHHHTTCCSEEEEEEESCTTCHHHHHHHHHHHHHHHHHSTTSCCCEEEEEEEECCHHHHH--HHHHHHHHTTT
T ss_pred HHHHHHHHHhhcccCCCcEEEEECCCCCHHHHHHHHHHHHhCccccccccccccEEEEEeCChHHHH--HHHHHHhcCCC
Confidence 3444333344432 34788887766544 4566654344 6789999999885332 222222233
Q ss_pred CceEEEcchHHHHHh-------hcCCEEEE
Q 045642 251 LKAIVITDSAVFAMI-------SRVNMVIV 273 (406)
Q Consensus 251 I~vt~I~Dsav~~~m-------~~vd~Vll 273 (406)
=.|++|.--+=-.-+ .+||.+|-
T Consensus 472 d~VtVI~gd~eev~lp~~~~~~ekVDIIVS 501 (745)
T 3ua3_A 472 RRVTIIESDMRSLPGIAKDRGFEQPDIIVS 501 (745)
T ss_dssp TCSEEEESCGGGHHHHHHHTTCCCCSEEEE
T ss_pred CeEEEEeCchhhcccccccCCCCcccEEEE
Confidence 347888643333333 57888874
No 356
>1o4s_A Aspartate aminotransferase; TM1255, structural genomics, JCS protein structure initiative, joint center for structural G transferase; HET: PLP; 1.90A {Thermotoga maritima} SCOP: c.67.1.1
Probab=36.95 E-value=1.8e+02 Score=27.22 Aligned_cols=102 Identities=18% Similarity=0.158 Sum_probs=52.7
Q ss_pred ccCcEEEeccChHHHHHHHHHHHHcCCceEEEEecCCCCcchHHHHHHHHhCCCceEEEcch-------HHHHHhh----
Q 045642 198 HQNEVILTLGHSKFVKEFLCAAKEKKRSFEVFIADGAPKFEGHILAKELDKKGLKAIVITDS-------AVFAMIS---- 266 (406)
Q Consensus 198 ~~g~~ILT~g~S~tV~~~L~~A~~~~~~f~ViV~EsrP~~eG~~~a~~L~~~GI~vt~I~Ds-------av~~~m~---- 266 (406)
....+++|.|.+..+..++..+.+.| -+|++.+ |.+.|.. ..+...|.++..++-. -+..+-+
T Consensus 100 ~~~~v~~~~g~t~al~~~~~~l~~~g--d~Vl~~~--~~~~~~~--~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~ 173 (389)
T 1o4s_A 100 SPDQVVVTNGAKQALFNAFMALLDPG--DEVIVFS--PVWVSYI--PQIILAGGTVNVVETFMSKNFQPSLEEVEGLLVG 173 (389)
T ss_dssp CGGGEEEESHHHHHHHHHHHHHCCTT--CEEEEEE--SCCTTHH--HHHHHTTCEEEEEECCGGGTTCCCHHHHHHTCCT
T ss_pred CHHHEEEecCHHHHHHHHHHHhCCCC--CEEEEcC--CCchhHH--HHHHHcCCEEEEEecCCccCCCCCHHHHHHhccc
Confidence 34567888777777777776664333 3566553 5555533 2344578887777521 1222222
Q ss_pred cCCEEEEcceeEeeCCCcccccchHHHHHHHhhCCCceEE
Q 045642 267 RVNMVIVGVHAVMANGGVIAPAGLHVLALAAKKHDVPFVV 306 (406)
Q Consensus 267 ~vd~VllGAdav~~nG~vvnk~GT~~lAl~Ak~~~vPv~V 306 (406)
++..|++ ...--+.|.+..+-=-..++-.|+.+++++++
T Consensus 174 ~~~~v~~-~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~ 212 (389)
T 1o4s_A 174 KTKAVLI-NSPNNPTGVVYRREFLEGLVRLAKKRNFYIIS 212 (389)
T ss_dssp TEEEEEE-ESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEE
T ss_pred CceEEEE-cCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEE
Confidence 2222332 11111123332222223566788899998876
No 357
>3olq_A Universal stress protein E; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: UNL; 1.82A {Proteus mirabilis}
Probab=36.87 E-value=2.4e+02 Score=25.52 Aligned_cols=65 Identities=12% Similarity=0.142 Sum_probs=38.2
Q ss_pred HHHHHHHhCCCc---eEEEcchHHHHHh---h--cCCEEEEcceeEeeCCCccc-ccchHHHHHHHhhCCCceEEecC
Q 045642 241 ILAKELDKKGLK---AIVITDSAVFAMI---S--RVNMVIVGVHAVMANGGVIA-PAGLHVLALAAKKHDVPFVVVAS 309 (406)
Q Consensus 241 ~~a~~L~~~GI~---vt~I~Dsav~~~m---~--~vd~VllGAdav~~nG~vvn-k~GT~~lAl~Ak~~~vPv~V~ae 309 (406)
.+...+.+.|++ +.+......-.+. . ++|.+++|+.. .|++-. -.|+..-.+ .++..+||+|+=+
T Consensus 232 ~l~~~~~~~~~~~~~~~v~~g~~~~~I~~~a~~~~~dLiV~G~~g---~~~~~~~~~Gsv~~~v-l~~~~~pVLvv~~ 305 (319)
T 3olq_A 232 AMKELRQKFSIPEEKTHVKEGLPEQVIPQVCEELNAGIVVLGILG---RTGLSAAFLGNTAEQL-IDHIKCDLLAIKP 305 (319)
T ss_dssp HHHHHHHHTTCCGGGEEEEESCHHHHHHHHHHHTTEEEEEEECCS---CCSTHHHHHHHHHHHH-HTTCCSEEEEECC
T ss_pred HHHHHHHHhCCCcccEEEecCCcHHHHHHHHHHhCCCEEEEeccC---ccCCccccccHHHHHH-HhhCCCCEEEECC
Confidence 344445667874 4444443333333 3 58999999975 344432 345544444 4667899999844
No 358
>3aow_A Putative uncharacterized protein PH0207; protein-PLP-AKG triple complex, schiff-base linkage, kynuren aminotransferase; HET: PLP AKG; 1.56A {Pyrococcus horikoshii} PDB: 3aov_A* 3ath_A* 3av7_A* 1x0m_A 1wst_A*
Probab=36.86 E-value=3e+02 Score=26.63 Aligned_cols=129 Identities=16% Similarity=0.180 Sum_probs=67.8
Q ss_pred HHHHHHHHHHHHHHH----H-----HHHHHHHHHHHHHHHhc---ccCcEEEeccChHHHHHHHHHHHHcCCceEEEEec
Q 045642 165 KKLKSELIKAVNELI----E-----DINTCREGIAEQAMELI---HQNEVILTLGHSKFVKEFLCAAKEKKRSFEVFIAD 232 (406)
Q Consensus 165 ~~~k~~l~~~i~~~~----~-----e~~~~~~~I~~~a~~~I---~~g~~ILT~g~S~tV~~~L~~A~~~~~~f~ViV~E 232 (406)
+++++.+.+.+++.. . .....++.|+++..+.. ...++++|.|.+..+..+++...+.| -+|++.
T Consensus 94 ~~v~~a~~~~l~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~v~~t~G~~~al~~~~~~l~~~G--d~Vlv~- 170 (448)
T 3aow_A 94 EIIRDILVEIMEKYADKALQYGTTKGFTPLRETLMKWLGKRYGISQDNDIMITSGSQQALDLIGRVFLNPG--DIVVVE- 170 (448)
T ss_dssp HHHHHHHHHHHHHSHHHHHSCCCTTCCHHHHHHHHHHHHHHHCCCTTSEEEEESSHHHHHHHHHHHHCCTT--CEEEEE-
T ss_pred HHHHHHHHHHHHhhhHHHhCCCCCCCcHHHHHHHHHHHHHhcCcCChhhEEEeCcHHHHHHHHHHHHcCCC--CEEEEe-
Confidence 555555555554321 0 12344556665542222 23457777777767666666654333 355554
Q ss_pred CCCCcchHHHHHHHHhCCCceEEEcc-------hHHHHHhh-------cCCEEEEcceeEeeCCCcccccch-------H
Q 045642 233 GAPKFEGHILAKELDKKGLKAIVITD-------SAVFAMIS-------RVNMVIVGVHAVMANGGVIAPAGL-------H 291 (406)
Q Consensus 233 srP~~eG~~~a~~L~~~GI~vt~I~D-------sav~~~m~-------~vd~VllGAdav~~nG~vvnk~GT-------~ 291 (406)
.|.+.|... .+...|.++..++- .++...+. ++..|++ .. ..-|..|+ .
T Consensus 171 -~p~y~~~~~--~~~~~g~~~~~v~~~~~g~d~~~L~~~l~~~~~~~~~~k~v~~-----~~--~~~NPtG~~~~~~~l~ 240 (448)
T 3aow_A 171 -APTYLAALQ--AFNFYEPQYIQIPLDDEGMKVEILEEKLKELKSQGKKVKVVYT-----VP--TFQNPAGVTMNEDRRK 240 (448)
T ss_dssp -ESCCHHHHH--HHHTTCCEEEEEEEETTEECHHHHHHHHHHHHHTTCCEEEEEE-----CC--SSCTTTCCCCCHHHHH
T ss_pred -CCChHHHHH--HHHHcCCEEEEeccCCCCCCHHHHHHHHhhhhccCCCCeEEEE-----CC--CCCCCcCCCCCHHHHH
Confidence 367777433 23457887776642 23333443 2222222 12 22344443 3
Q ss_pred HHHHHHhhCCCceEE
Q 045642 292 VLALAAKKHDVPFVV 306 (406)
Q Consensus 292 ~lAl~Ak~~~vPv~V 306 (406)
.++-+|+.+++++++
T Consensus 241 ~i~~la~~~~~~lI~ 255 (448)
T 3aow_A 241 YLLELASEYDFIVVE 255 (448)
T ss_dssp HHHHHHHHHTCEEEE
T ss_pred HHHHHHHHcCCEEEE
Confidence 577788899998876
No 359
>3jzl_A Putative cystathionine beta-lyase involved in ALU resistance; putative cystathionine beta-lyase involved in aluminum resis structural genomics; HET: LLP; 1.91A {Listeria monocytogenes str} PDB: 3fd0_A*
Probab=36.81 E-value=1.1e+02 Score=29.91 Aligned_cols=95 Identities=9% Similarity=0.078 Sum_probs=51.8
Q ss_pred eccChHHHHHHHHHHHHcCCceEEEEecCCCCcchH-HHH-------HHHHhCCCceEEEcc--------hHHHHHhhc-
Q 045642 205 TLGHSKFVKEFLCAAKEKKRSFEVFIADGAPKFEGH-ILA-------KELDKKGLKAIVITD--------SAVFAMISR- 267 (406)
Q Consensus 205 T~g~S~tV~~~L~~A~~~~~~f~ViV~EsrP~~eG~-~~a-------~~L~~~GI~vt~I~D--------sav~~~m~~- 267 (406)
|.|.+..+...|....+ +.-+|++.+ .|.+.+. .+. ..|...|+.+..++- .++-..+..
T Consensus 83 ~~sGt~Ai~~al~all~--~GD~Vl~~~-~~~y~~~~~~~~~~g~~~~~l~~~G~~~~~v~~~~~g~~d~e~l~~ai~~~ 159 (409)
T 3jzl_A 83 IISGTHAISTVLFGILR--PDDELLYIT-GQPYDTLEEIVGIRKQGQGSLKDFHIGYSSVPLLENGDVDFPRIAKKMTPK 159 (409)
T ss_dssp SCSHHHHHHHHHHHHCC--TTCEEEECS-SSCCTTHHHHHTSSSSSSSCTGGGTCEEEECCCCTTSCCCHHHHHHHCCTT
T ss_pred CccHHHHHHHHHHHhcC--CCCEEEEeC-CCCcHhHHHHHhcccchhhHHHHcCCEEEEeCCCCCCCcCHHHHHHhccCC
Confidence 44555555555554442 333555554 4555553 344 456778999888753 233333332
Q ss_pred CCEEEEcceeEeeCCCcccccchH----HHHHHHhh--CCCceEE
Q 045642 268 VNMVIVGVHAVMANGGVIAPAGLH----VLALAAKK--HDVPFVV 306 (406)
Q Consensus 268 vd~VllGAdav~~nG~vvnk~GT~----~lAl~Ak~--~~vPv~V 306 (406)
...|++.. +-|...|..|+. .++-+|+. ++++|+|
T Consensus 160 tklV~i~~----s~g~p~nptg~v~~l~~I~~la~~~~~~~~liv 200 (409)
T 3jzl_A 160 TKMIGIQR----SRGYADRPSFTIEKIKEMIVFVKNINPEVIVFV 200 (409)
T ss_dssp EEEEEEEC----SCTTSSSCCCCHHHHHHHHHHHHHHCTTCEEEE
T ss_pred CeEEEEEC----CCCCCCCCcCccccHHHHHHHHHhhCCCCEEEE
Confidence 22232211 123366777764 46677888 8998887
No 360
>3rq1_A Aminotransferase class I and II; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta structure, cytosol; HET: AKG GOL; 2.20A {Veillonella parvula}
Probab=36.67 E-value=2.3e+02 Score=26.78 Aligned_cols=100 Identities=16% Similarity=0.110 Sum_probs=55.7
Q ss_pred cEEEeccChHHHHHHHHHHHHcCCceEEEEecCCCCcchHHHHHHHHhCCCceEEEcc---------hHHHHHhh-----
Q 045642 201 EVILTLGHSKFVKEFLCAAKEKKRSFEVFIADGAPKFEGHILAKELDKKGLKAIVITD---------SAVFAMIS----- 266 (406)
Q Consensus 201 ~~ILT~g~S~tV~~~L~~A~~~~~~f~ViV~EsrP~~eG~~~a~~L~~~GI~vt~I~D---------sav~~~m~----- 266 (406)
.+++|.|.+..+..++....+.| -+|++.+ |.+.+... .+...|.++..++- ..+-..+.
T Consensus 104 ~i~~t~g~~~al~~~~~~l~~~g--d~Vl~~~--p~~~~~~~--~~~~~g~~~~~v~~~~~~~~~d~~~l~~~l~~~~~~ 177 (418)
T 3rq1_A 104 RSIATAGGTGGIHHLIHNYTEPG--DEVLTAD--WYWGAYRV--ICSDTGRTLVTYSLFDEHNNFNHEAFQNRVNELAAK 177 (418)
T ss_dssp EEEEESHHHHHHHHHHHHHSCTT--CEEEEES--SCCTHHHH--HHHHTTCEEEEECSBCTTSSBCHHHHHHHHHHHHHH
T ss_pred cEEECCchHHHHHHHHHHhcCCC--CEEEECC--CCchhHHH--HHHHcCCEEEEEeeeCCCCCcCHHHHHHHHHHhhcc
Confidence 57777777767666666554333 4566655 77766432 34557888887751 12323333
Q ss_pred cCCEEEEccee-EeeCCCcccccchHHHHHHHh------hCCCceEE
Q 045642 267 RVNMVIVGVHA-VMANGGVIAPAGLHVLALAAK------KHDVPFVV 306 (406)
Q Consensus 267 ~vd~VllGAda-v~~nG~vvnk~GT~~lAl~Ak------~~~vPv~V 306 (406)
+..++++=..- --+.|.+...-.-..++-.|+ .+++.+++
T Consensus 178 ~~~~~vi~~~p~~NPtG~~~~~~~l~~l~~~~~~~~~~~~~~~~li~ 224 (418)
T 3rq1_A 178 QTNVVVIFNTPGNNPTGYSIEDKDWDSILNFLKDLVAIGRNNVIIGI 224 (418)
T ss_dssp CSEEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHHHTSSCEEEEEE
T ss_pred CCCEEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHhhhccCCCeEEEE
Confidence 33323332211 234466666555556666676 67776665
No 361
>2a8y_A 5'-methylthioadenosine phosphorylase (MTAP); alpha/beta, beta sheet, beta barrel, transferase; HET: MTA; 1.45A {Sulfolobus solfataricus} PDB: 3t94_A* 1v4n_A
Probab=36.54 E-value=98 Score=28.64 Aligned_cols=22 Identities=14% Similarity=0.006 Sum_probs=19.0
Q ss_pred cchHHHHHHHhhCCCceEEecC
Q 045642 288 AGLHVLALAAKKHDVPFVVVAS 309 (406)
Q Consensus 288 ~GT~~lAl~Ak~~~vPv~V~ae 309 (406)
+=+.++|.+|+++++||.+++-
T Consensus 190 Me~a~ea~vA~~~gi~~~~i~~ 211 (270)
T 2a8y_A 190 MTLVPEVNLACEAQMCYATIAM 211 (270)
T ss_dssp SSHHHHHHHHHHTTCEEEEEEE
T ss_pred CcHHHHHHHHHHCCCCEEEEEE
Confidence 4478899999999999999864
No 362
>3cnb_A DNA-binding response regulator, MERR family; signal receiver domain, DNA binding protein, protein structu initiative, PSI-2; 2.00A {Colwellia psychrerythraea}
Probab=36.49 E-value=1.1e+02 Score=23.47 Aligned_cols=79 Identities=9% Similarity=0.253 Sum_probs=46.9
Q ss_pred CceEEEEecCCCCcchHHHHHHHHh-CCCc-eEEEcchHHH-HHhh--cCCEEEEcceeEeeCCCcccccchHHHHHHHh
Q 045642 224 RSFEVFIADGAPKFEGHILAKELDK-KGLK-AIVITDSAVF-AMIS--RVNMVIVGVHAVMANGGVIAPAGLHVLALAAK 298 (406)
Q Consensus 224 ~~f~ViV~EsrP~~eG~~~a~~L~~-~GI~-vt~I~Dsav~-~~m~--~vd~VllGAdav~~nG~vvnk~GT~~lAl~Ak 298 (406)
...+|.++|..|.. ...+...|.+ .|+. +....+..-+ ..+. ..|.||+..+- -..-|.-.+..+.+
T Consensus 7 ~~~~iLivdd~~~~-~~~l~~~L~~~~~~~~v~~~~~~~~a~~~l~~~~~dlii~d~~l-------~~~~g~~~~~~l~~ 78 (143)
T 3cnb_A 7 NDFSILIIEDDKEF-ADMLTQFLENLFPYAKIKIAYNPFDAGDLLHTVKPDVVMLDLMM-------VGMDGFSICHRIKS 78 (143)
T ss_dssp --CEEEEECSCHHH-HHHHHHHHHHHCTTCEEEEECSHHHHHHHHHHTCCSEEEEETTC-------TTSCHHHHHHHHHT
T ss_pred CCceEEEEECCHHH-HHHHHHHHHhccCccEEEEECCHHHHHHHHHhcCCCEEEEeccc-------CCCcHHHHHHHHHh
Confidence 45788888877643 3456677777 8998 7766664332 2232 47888876533 12234444444443
Q ss_pred ---hCCCceEEecCC
Q 045642 299 ---KHDVPFVVVAST 310 (406)
Q Consensus 299 ---~~~vPv~V~aes 310 (406)
...+|+++++..
T Consensus 79 ~~~~~~~~ii~~s~~ 93 (143)
T 3cnb_A 79 TPATANIIVIAMTGA 93 (143)
T ss_dssp STTTTTSEEEEEESS
T ss_pred CccccCCcEEEEeCC
Confidence 357999998764
No 363
>3ruy_A Ornithine aminotransferase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha and beta protein; HET: LLP; 2.65A {Bacillus anthracis} SCOP: c.67.1.0
Probab=36.48 E-value=2.4e+02 Score=26.28 Aligned_cols=109 Identities=25% Similarity=0.277 Sum_probs=56.6
Q ss_pred HhcccCcEEEeccChHHHHHHHHHHHHc--------CCceEEEEecCCCCcchH-HHHHHHHhC----------CCceEE
Q 045642 195 ELIHQNEVILTLGHSKFVKEFLCAAKEK--------KRSFEVFIADGAPKFEGH-ILAKELDKK----------GLKAIV 255 (406)
Q Consensus 195 ~~I~~g~~ILT~g~S~tV~~~L~~A~~~--------~~~f~ViV~EsrP~~eG~-~~a~~L~~~----------GI~vt~ 255 (406)
+++....+++|-|.+..+..+++.+... ..+-+|++.+ |.+.|. ..+..+... ..++..
T Consensus 89 ~~~g~~~v~~~~~gt~a~~~al~~~~~~~~~~~~~~~~~~~vi~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (392)
T 3ruy_A 89 KLTNKEMVLPMNTGAEAVETAIKTARRWAYDVKKVEANRAEIIVCE--DNFHGRTMGAVSMSSNEEYKRGFGPMLPGIIV 166 (392)
T ss_dssp HHHTCSEEEEESSHHHHHHHHHHHHHHHHHHTSCCCTTCCEEEEET--TCCCCSSHHHHHTCSCTTTTTTCCSCCSSEEE
T ss_pred HhcCCCEEEEeCcHHHHHHHHHHHHHHhhhhccCCCCCCcEEEEEc--CCcCCCCHhhhhccCChhhccccCCCCCCCee
Confidence 3444556788888888888888766533 1233555543 334442 222222211 112444
Q ss_pred Ec--c-hHHHHHhh-cCCEEEEcceeEeeCCCcccccc-hHHHHHHHhhCCCceEE
Q 045642 256 IT--D-SAVFAMIS-RVNMVIVGVHAVMANGGVIAPAG-LHVLALAAKKHDVPFVV 306 (406)
Q Consensus 256 I~--D-sav~~~m~-~vd~VllGAdav~~nG~vvnk~G-T~~lAl~Ak~~~vPv~V 306 (406)
++ | ..+-..+. ++..|++-. .--+.|.+..... -..++-+|++|++++++
T Consensus 167 ~~~~d~~~l~~~l~~~~~~v~~~~-~~nptG~~~~~~~~l~~i~~l~~~~~~~li~ 221 (392)
T 3ruy_A 167 IPYGDLEALKAAITPNTAAFILEP-IQGEAGINIPPAGFLKEALEVCKKENVLFVA 221 (392)
T ss_dssp ECTTCHHHHHHHCCTTEEEEEECS-SBSTTTSBCCCTTHHHHHHHHHHTTTCEEEE
T ss_pred eCcccHHHHHHHhccCeEEEEEeC-ccCCCCCccCCHHHHHHHHHHHHHcCCEEEE
Confidence 43 3 23333343 344444432 2122244444555 66788899999998886
No 364
>5nul_A Flavodoxin; electron transport, flavoprotein, FMN; HET: FMN; 1.60A {Clostridium beijerinckii} SCOP: c.23.5.1 PDB: 2flv_A* 2fvx_A* 1fld_A* 3nll_A* 1fvx_A* 1fla_A* 4nll_A* 5nll_A* 2fox_A* 5ull_A* 2fdx_A* 2fax_A* 6nul_A* 1fln_A* 4nul_A*
Probab=36.45 E-value=67 Score=25.69 Aligned_cols=66 Identities=18% Similarity=0.250 Sum_probs=38.7
Q ss_pred HHHHHHHhCCCceEEEcchHH-HHHhhcCCEEEEcceeEeeCCCccc--ccchHHHHHHHhhCCCceEEec
Q 045642 241 ILAKELDKKGLKAIVITDSAV-FAMISRVNMVIVGVHAVMANGGVIA--PAGLHVLALAAKKHDVPFVVVA 308 (406)
Q Consensus 241 ~~a~~L~~~GI~vt~I~Dsav-~~~m~~vd~VllGAdav~~nG~vvn--k~GT~~lAl~Ak~~~vPv~V~a 308 (406)
.+++.|.+.|++|+++.-... ..-+.+.|.|++|+-. + +|+..- .+-.+.--+.....++|+.+++
T Consensus 18 ~ia~~l~~~g~~v~~~~~~~~~~~~l~~~d~iiig~pt-y-~~g~~p~~~~~~fl~~l~~~l~~k~~~~f~ 86 (138)
T 5nul_A 18 LIAKGIIESGKDVNTINVSDVNIDELLNEDILILGCSA-M-TDEVLEESEFEPFIEEISTKISGKKVALFG 86 (138)
T ss_dssp HHHHHHHHTTCCCEEEEGGGCCHHHHTTCSEEEEEECC-B-TTTBCCTTTHHHHHHHHGGGCTTCEEEEEE
T ss_pred HHHHHHHHCCCeEEEEEhhhCCHHHHhhCCEEEEEcCc-c-CCCCCChHHHHHHHHHHHhhcCCCEEEEEE
Confidence 345566678988887754332 2346789999999754 3 344433 2333332222224678888776
No 365
>2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2xpc_A* 2y1o_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 2jfg_A* 2y66_A* 2y67_A* 2y68_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A*
Probab=36.39 E-value=32 Score=34.07 Aligned_cols=103 Identities=10% Similarity=0.110 Sum_probs=58.3
Q ss_pred CcEEEeccChHHHHHHHHHHHHcCCceEEEEecCCCCcchHHHHHHHHhCCCceEEEcchHHHHHhhcCCEEEEcceeEe
Q 045642 200 NEVILTLGHSKFVKEFLCAAKEKKRSFEVFIADGAPKFEGHILAKELDKKGLKAIVITDSAVFAMISRVNMVIVGVHAVM 279 (406)
Q Consensus 200 g~~ILT~g~S~tV~~~L~~A~~~~~~f~ViV~EsrP~~eG~~~a~~L~~~GI~vt~I~Dsav~~~m~~vd~VllGAdav~ 279 (406)
+..|+.+|-..+=....+.+.+ +..+|.+.|+++...|. ..|. .|+++.+-.+. ...+..+|.||++... -
T Consensus 5 ~~~v~viG~G~~G~~~a~~l~~--~G~~v~~~D~~~~~~~~---~~l~-~G~~~~~g~~~--~~~~~~~d~vV~s~gi-~ 75 (439)
T 2x5o_A 5 GKNVVIIGLGLTGLSCVDFFLA--RGVTPRVMDTRMTPPGL---DKLP-EAVERHTGSLN--DEWLMAADLIVASPGI-A 75 (439)
T ss_dssp TCCEEEECCHHHHHHHHHHHHT--TTCCCEEEESSSSCTTG---GGSC-TTSCEEESSCC--HHHHHTCSEEEECTTS-C
T ss_pred CCEEEEEeecHHHHHHHHHHHh--CCCEEEEEECCCCcchh---HHhh-CCCEEEECCCc--HHHhccCCEEEeCCCC-C
Confidence 4567777766655555555553 45788999998876654 4466 79988765533 2223478888887532 1
Q ss_pred eCCCcccc---cc---hHHHHHHHhhCCCceEEecCCc
Q 045642 280 ANGGVIAP---AG---LHVLALAAKKHDVPFVVVASTH 311 (406)
Q Consensus 280 ~nG~vvnk---~G---T~~lAl~Ak~~~vPv~V~aes~ 311 (406)
.+--.+-. -| ...++++++..+.|++.+++|.
T Consensus 76 ~~~p~~~~a~~~~~~v~~~~~~~~~~~~~~vI~VTGTn 113 (439)
T 2x5o_A 76 LAHPSLSAAADAGIEIVGDIELFCREAQAPIVAITGSN 113 (439)
T ss_dssp TTCHHHHHHHHTTCEEECHHHHHHHHCCSCEEEEECSS
T ss_pred CCCHHHHHHHHCCCcEEEHHHHHHHhcCCCEEEEECCC
Confidence 11000000 00 1124445555667777777764
No 366
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=36.30 E-value=1.7e+02 Score=23.65 Aligned_cols=97 Identities=19% Similarity=0.170 Sum_probs=52.7
Q ss_pred cEEEeccChHHHHHHHHHHHHcCCceEEEEecCCCCcchHHHHHHHHhCCCceEEE--cchHH-HHH-hhcCCEEEEcce
Q 045642 201 EVILTLGHSKFVKEFLCAAKEKKRSFEVFIADGAPKFEGHILAKELDKKGLKAIVI--TDSAV-FAM-ISRVNMVIVGVH 276 (406)
Q Consensus 201 ~~ILT~g~S~tV~~~L~~A~~~~~~f~ViV~EsrP~~eG~~~a~~L~~~GI~vt~I--~Dsav-~~~-m~~vd~VllGAd 276 (406)
..|+.+|+...-..+.+...+.| ++|.+++..|... ..........|+.+..- +|... ... +.++|.|++..+
T Consensus 4 ~~vlI~G~G~vG~~la~~L~~~g--~~V~vid~~~~~~-~~~~~~~~~~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~ 80 (153)
T 1id1_A 4 DHFIVCGHSILAINTILQLNQRG--QNVTVISNLPEDD-IKQLEQRLGDNADVIPGDSNDSSVLKKAGIDRCRAILALSD 80 (153)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTT--CCEEEEECCCHHH-HHHHHHHHCTTCEEEESCTTSHHHHHHHTTTTCSEEEECSS
T ss_pred CcEEEECCCHHHHHHHHHHHHCC--CCEEEEECCChHH-HHHHHHhhcCCCeEEEcCCCCHHHHHHcChhhCCEEEEecC
Confidence 45677788777666666666544 5677777664211 11122333457765442 12222 222 567888877653
Q ss_pred eEeeCCCcccccchHHHHHHHhhC-C-CceEEecC
Q 045642 277 AVMANGGVIAPAGLHVLALAAKKH-D-VPFVVVAS 309 (406)
Q Consensus 277 av~~nG~vvnk~GT~~lAl~Ak~~-~-vPv~V~ae 309 (406)
. ..-...+++.||.. + .++++.+.
T Consensus 81 ~---------d~~n~~~~~~a~~~~~~~~ii~~~~ 106 (153)
T 1id1_A 81 N---------DADNAFVVLSAKDMSSDVKTVLAVS 106 (153)
T ss_dssp C---------HHHHHHHHHHHHHHTSSSCEEEECS
T ss_pred C---------hHHHHHHHHHHHHHCCCCEEEEEEC
Confidence 2 12345677788875 4 45555443
No 367
>2qvg_A Two component response regulator; NYSGXRC, PSI-2, structural genomics, protein structure initiative; 1.50A {Legionella pneumophila subsp}
Probab=36.16 E-value=1.1e+02 Score=23.80 Aligned_cols=79 Identities=8% Similarity=0.140 Sum_probs=46.3
Q ss_pred CceEEEEecCCCCcchHHHHHHHHhCCC--ceEEEcchHH--HHHh-------hcCCEEEEcceeEeeCCCcccccchHH
Q 045642 224 RSFEVFIADGAPKFEGHILAKELDKKGL--KAIVITDSAV--FAMI-------SRVNMVIVGVHAVMANGGVIAPAGLHV 292 (406)
Q Consensus 224 ~~f~ViV~EsrP~~eG~~~a~~L~~~GI--~vt~I~Dsav--~~~m-------~~vd~VllGAdav~~nG~vvnk~GT~~ 292 (406)
++.+|.|+|..|.. ...+...|.+.|. .|....+..- ..+- ...|.||+..+. . ..-|--.
T Consensus 6 ~~~~ILivdd~~~~-~~~l~~~L~~~g~~~~v~~~~~~~~a~~~l~~~~~~~~~~~dlii~D~~l--~-----~~~g~~~ 77 (143)
T 2qvg_A 6 DKVDILYLEDDEVD-IQSVERVFHKISSLIKIEIAKSGNQALDMLYGRNKENKIHPKLILLDINI--P-----KMNGIEF 77 (143)
T ss_dssp -CCSEEEECCCHHH-HHHHHHHHHHHCTTCCEEEESSHHHHHHHHHTCTTCCCCCCSEEEEETTC--T-----TSCHHHH
T ss_pred CCCeEEEEeCCHHH-HHHHHHHHHHhCCCceEEEECCHHHHHHHHHhcccccCCCCCEEEEecCC--C-----CCCHHHH
Confidence 34677888877642 3455667777777 7777766433 2222 247888886542 1 2234444
Q ss_pred HHHHHhh---CCCceEEecCC
Q 045642 293 LALAAKK---HDVPFVVVAST 310 (406)
Q Consensus 293 lAl~Ak~---~~vPv~V~aes 310 (406)
+..+.+. .++|+++++..
T Consensus 78 ~~~l~~~~~~~~~~ii~ls~~ 98 (143)
T 2qvg_A 78 LKELRDDSSFTDIEVFVLTAA 98 (143)
T ss_dssp HHHHTTSGGGTTCEEEEEESC
T ss_pred HHHHHcCccccCCcEEEEeCC
Confidence 4444444 47899998754
No 368
>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A
Probab=36.12 E-value=97 Score=27.89 Aligned_cols=96 Identities=21% Similarity=0.211 Sum_probs=59.4
Q ss_pred cCcEEEeccChHHHHHHHHHH-HHcCCceEEEEecCCCCcchHHHHHHHHhCCCceEEE-cc----hHHHHHhh------
Q 045642 199 QNEVILTLGHSKFVKEFLCAA-KEKKRSFEVFIADGAPKFEGHILAKELDKKGLKAIVI-TD----SAVFAMIS------ 266 (406)
Q Consensus 199 ~g~~ILT~g~S~tV~~~L~~A-~~~~~~f~ViV~EsrP~~eG~~~a~~L~~~GI~vt~I-~D----sav~~~m~------ 266 (406)
.|.+||+.|.++.+=..+... .++ ..+|+++..++......+...+.+.|.++.++ .| ..+..++.
T Consensus 28 ~~k~vlITGas~gIG~~la~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~ 105 (271)
T 4iin_A 28 TGKNVLITGASKGIGAEIAKTLASM--GLKVWINYRSNAEVADALKNELEEKGYKAAVIKFDAASESDFIEAIQTIVQSD 105 (271)
T ss_dssp SCCEEEETTCSSHHHHHHHHHHHHT--TCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHhc
Confidence 567888888887776655443 333 46788877655555567788888888877765 23 23333333
Q ss_pred -cCCEEEEcceeEeeCCCc-------------ccccchHHHHHHH
Q 045642 267 -RVNMVIVGVHAVMANGGV-------------IAPAGLHVLALAA 297 (406)
Q Consensus 267 -~vd~VllGAdav~~nG~v-------------vnk~GT~~lAl~A 297 (406)
++|.||-.|- +...+.+ +|-.|++.++..+
T Consensus 106 g~id~li~nAg-~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~ 149 (271)
T 4iin_A 106 GGLSYLVNNAG-VVRDKLAIKMKTEDFHHVIDNNLTSAFIGCREA 149 (271)
T ss_dssp SSCCEEEECCC-CCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHH
T ss_pred CCCCEEEECCC-cCCCcccccCCHHHHHHHHHhccHHHHHHHHHH
Confidence 6888877663 3333322 3556777666554
No 369
>3fvs_A Kynurenine--oxoglutarate transaminase 1; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: LLP; 1.50A {Homo sapiens} SCOP: c.67.1.1 PDB: 3fvu_A* 3fvx_A* 1w7l_A* 1w7m_A* 1w7n_A*
Probab=36.12 E-value=65 Score=30.67 Aligned_cols=52 Identities=19% Similarity=0.191 Sum_probs=31.6
Q ss_pred CcEEEeccChHHHHHHHHHHHHcCCceEEEEecCCCCcchHHHHHHHHhCCCceEEEc
Q 045642 200 NEVILTLGHSKFVKEFLCAAKEKKRSFEVFIADGAPKFEGHILAKELDKKGLKAIVIT 257 (406)
Q Consensus 200 g~~ILT~g~S~tV~~~L~~A~~~~~~f~ViV~EsrP~~eG~~~a~~L~~~GI~vt~I~ 257 (406)
..+++|.|.+..+..++..+.+.| -+|++. .|.+.|.. ..+...|..+..++
T Consensus 92 ~~i~~~~g~~~a~~~~~~~~~~~g--d~vl~~--~p~~~~~~--~~~~~~g~~~~~~~ 143 (422)
T 3fvs_A 92 RNVLVTVGGYGALFTAFQALVDEG--DEVIII--EPFFDCYE--PMTMMAGGRPVFVS 143 (422)
T ss_dssp HHEEEESHHHHHHHHHHHHHCCTT--CEEEEE--ESCCTTHH--HHHHHTTCEEEEEE
T ss_pred CcEEEECChHHHHHHHHHHHcCCC--CEEEEc--CCCchhhH--HHHHHcCCEEEEEe
Confidence 367888887777777777664333 345554 45555532 33445788777664
No 370
>1wta_A 5'-methylthioadenosine phosphorylase; A/B structure, transferase; HET: ADE; 1.78A {Aeropyrum pernix}
Probab=36.09 E-value=1e+02 Score=28.65 Aligned_cols=22 Identities=14% Similarity=-0.025 Sum_probs=19.0
Q ss_pred cchHHHHHHHhhCCCceEEecC
Q 045642 288 AGLHVLALAAKKHDVPFVVVAS 309 (406)
Q Consensus 288 ~GT~~lAl~Ak~~~vPv~V~ae 309 (406)
+=+.++|.+|+++++||.+++-
T Consensus 195 Me~a~ea~vA~~~gi~~~~i~~ 216 (275)
T 1wta_A 195 MTLVPEINLACEAQLCYATLAM 216 (275)
T ss_dssp SSHHHHHHHHHHTTCEEEEEEE
T ss_pred ccHHHHHHHHHHCCCCEEEEEE
Confidence 4478899999999999999864
No 371
>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2
Probab=36.03 E-value=1.6e+02 Score=26.44 Aligned_cols=108 Identities=18% Similarity=0.223 Sum_probs=59.5
Q ss_pred cCcEEEeccChHHHHHHHHHHH-HcCCceEEEEecCCCCcchHHHHHHH-HhCCCceEEE-cc----hHHHHHhh-----
Q 045642 199 QNEVILTLGHSKFVKEFLCAAK-EKKRSFEVFIADGAPKFEGHILAKEL-DKKGLKAIVI-TD----SAVFAMIS----- 266 (406)
Q Consensus 199 ~g~~ILT~g~S~tV~~~L~~A~-~~~~~f~ViV~EsrP~~eG~~~a~~L-~~~GI~vt~I-~D----sav~~~m~----- 266 (406)
.|.+||+.|.|+-+=..+.... ++| .+|+++.-++ .....++++| ...|..+.++ .| .++..++.
T Consensus 20 ~~k~~lVTGas~gIG~~ia~~l~~~G--~~V~~~~r~~-~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~ 96 (267)
T 1vl8_A 20 RGRVALVTGGSRGLGFGIAQGLAEAG--CSVVVASRNL-EEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVKEK 96 (267)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTT--CEEEEEESCH-HHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCC--CEEEEEeCCH-HHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 4667888888877766665443 334 6788775443 2234556666 4456666544 33 23333443
Q ss_pred --cCCEEEEcceeEeeCCCc-------------ccccchHHHHHHH----hhCCCceEEecCC
Q 045642 267 --RVNMVIVGVHAVMANGGV-------------IAPAGLHVLALAA----KKHDVPFVVVAST 310 (406)
Q Consensus 267 --~vd~VllGAdav~~nG~v-------------vnk~GT~~lAl~A----k~~~vPv~V~aes 310 (406)
++|.||--|- +...+.+ +|-.|++.++.++ +..+..-+|...+
T Consensus 97 ~g~iD~lvnnAg-~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS 158 (267)
T 1vl8_A 97 FGKLDTVVNAAG-INRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNPSIINIGS 158 (267)
T ss_dssp HSCCCEEEECCC-CCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSSCEEEEECC
T ss_pred cCCCCEEEECCC-cCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECC
Confidence 5788776553 2222221 4677888776655 2344455554433
No 372
>3fxa_A SIS domain protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 1.60A {Listeria monocytogenes str}
Probab=35.98 E-value=1.7e+02 Score=24.87 Aligned_cols=63 Identities=17% Similarity=0.199 Sum_probs=41.0
Q ss_pred HHHHHHHhCCCceEEEcchHHHHH----hhcCCEEEEcceeEeeCCCcccccchHHHHHHHhhCCCceEEecCC
Q 045642 241 ILAKELDKKGLKAIVITDSAVFAM----ISRVNMVIVGVHAVMANGGVIAPAGLHVLALAAKKHDVPFVVVAST 310 (406)
Q Consensus 241 ~~a~~L~~~GI~vt~I~Dsav~~~----m~~vd~VllGAdav~~nG~vvnk~GT~~lAl~Ak~~~vPv~V~aes 310 (406)
.++..|...|+++..+.|...... +..=|.||+-. ..|. ..-+..++-.||..|+|+++++..
T Consensus 62 ~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~dvvI~iS----~sG~---t~~~~~~~~~ak~~g~~vi~IT~~ 128 (201)
T 3fxa_A 62 KLVHSFNCIERPAVFLTPSDAVHGTLGVLQKEDILILIS----KGGN---TGELLNLIPACKTKGSTLIGVTEN 128 (201)
T ss_dssp HHHHHHHHTTCCEEECCHHHHTTTGGGGCCTTCEEEEEC----SSSC---CHHHHTTHHHHHHHTCEEEEEESC
T ss_pred HHHHHHHhcCCcEEEeCchHHHhhhhhcCCCCCEEEEEe----CCCC---CHHHHHHHHHHHHcCCeEEEEECC
Confidence 345666778999998887654321 33446555432 2342 234566778999999999999864
No 373
>1jmv_A USPA, universal stress protein A; chaperone; 1.85A {Haemophilus influenzae} SCOP: c.26.2.4
Probab=35.98 E-value=1.5e+02 Score=23.06 Aligned_cols=60 Identities=10% Similarity=0.071 Sum_probs=35.0
Q ss_pred HHHHHhCCCce--EEEcc-h---HHHHHhh--cCCEEEEcceeEeeCCCcccccchHHHHHHHhhCCCceEEec
Q 045642 243 AKELDKKGLKA--IVITD-S---AVFAMIS--RVNMVIVGVHAVMANGGVIAPAGLHVLALAAKKHDVPFVVVA 308 (406)
Q Consensus 243 a~~L~~~GI~v--t~I~D-s---av~~~m~--~vd~VllGAdav~~nG~vvnk~GT~~lAl~Ak~~~vPv~V~a 308 (406)
.+.+.+.|+++ +.+.. . .+..+.. ++|.+++|++ . |+ ..+.|+. ..-+.++..+||+|+-
T Consensus 70 ~~~~~~~~~~~~~~~~~~g~~~~~I~~~a~~~~~dliV~G~~--~--~~-~~~lgs~-~~~vl~~~~~pVlvv~ 137 (141)
T 1jmv_A 70 LDLAESVDYPISEKLSGSGDLGQVLSDAIEQYDVDLLVTGHH--Q--DF-WSKLMSS-TRQVMNTIKIDMLVVP 137 (141)
T ss_dssp HHHHHHSSSCCCCEEEEEECHHHHHHHHHHHTTCCEEEEEEC--C--CC-HHHHHHH-HHHHHTTCCSEEEEEE
T ss_pred HHHHHHcCCCceEEEEecCCHHHHHHHHHHhcCCCEEEEeCC--C--ch-hhhhcch-HHHHHhcCCCCEEEee
Confidence 33344578775 23322 2 2233333 3999999987 2 33 3346744 3445677789999974
No 374
>2c81_A Glutamine-2-deoxy-scyllo-inosose aminotransferase; SMAT, butirosin, aminoglycoside antibiotics; HET: PMP; 1.7A {Bacillus circulans} PDB: 2c7t_A*
Probab=35.86 E-value=1.6e+02 Score=27.92 Aligned_cols=107 Identities=14% Similarity=0.089 Sum_probs=54.6
Q ss_pred HHHHHHHhcccCcEEEeccChHHHHHHHHHHHHcCCceEEEEecCCCCcchHHHHHHHHhCCCceEEEcch------HHH
Q 045642 189 IAEQAMELIHQNEVILTLGHSKFVKEFLCAAKEKKRSFEVFIADGAPKFEGHILAKELDKKGLKAIVITDS------AVF 262 (406)
Q Consensus 189 I~~~a~~~I~~g~~ILT~g~S~tV~~~L~~A~~~~~~f~ViV~EsrP~~eG~~~a~~L~~~GI~vt~I~Ds------av~ 262 (406)
+.+..++++.-.+.|+|-+.+..+..++..+. .+..-+|++. .|.+.+... .+...|..+..++-. -..
T Consensus 47 l~~~la~~~g~~~~i~~~~gt~al~~~~~~~~-~~~gd~Vl~~--~~~~~~~~~--~~~~~g~~~~~~~~~~~~~~~d~~ 121 (418)
T 2c81_A 47 FAKAFADFNGVPYCVPTTSGSTALMLALEALG-IGEGDEVIVP--SLTWIATAT--AVLNVNALPVFVDVEADTYCIDPQ 121 (418)
T ss_dssp HHHHHHHHHTCSEEEEESCHHHHHHHHHHHTT-CCTTCEEEEE--SSSCTHHHH--HHHHTTCEEEEECBCTTTCSBCHH
T ss_pred HHHHHHHHhCCCcEEEeCCHHHHHHHHHHHcC-CCCcCEEEEC--CCccHhHHH--HHHHcCCEEEEEecCCCCCCcCHH
Confidence 33333444443467777666655555555541 1223356665 455666432 344678888877532 122
Q ss_pred HHhhcC---CEEEEcceeEeeCCCcccccchHHHHHHHhhCCCceEE
Q 045642 263 AMISRV---NMVIVGVHAVMANGGVIAPAGLHVLALAAKKHDVPFVV 306 (406)
Q Consensus 263 ~~m~~v---d~VllGAdav~~nG~vvnk~GT~~lAl~Ak~~~vPv~V 306 (406)
.+-+.+ .++|+-.+ ..|.+ .--..++-+|+.++++|++
T Consensus 122 ~l~~~i~~~~~~v~~~~---~~G~~---~~~~~i~~~~~~~~~~li~ 162 (418)
T 2c81_A 122 LIKSAITDKTKAIIPVH---LFGSM---ANMDEINEIAQEHNLFVIE 162 (418)
T ss_dssp HHGGGCCTTEEEECCBC---CTTCC---CCHHHHHHHHHHTTCEEEE
T ss_pred HHHHhhCCCCeEEEEeC---CcCCc---ccHHHHHHHHHHCCCEEEE
Confidence 222222 23333222 23322 1124677788999998876
No 375
>3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A*
Probab=35.67 E-value=94 Score=28.83 Aligned_cols=99 Identities=12% Similarity=0.163 Sum_probs=55.7
Q ss_pred cEEEeccC---hH---HHHHHHHHHHHcCCceEEEEecCCCCcchHHHHHHHHhCCC--ceEE---EcchHHHHHhhcCC
Q 045642 201 EVILTLGH---SK---FVKEFLCAAKEKKRSFEVFIADGAPKFEGHILAKELDKKGL--KAIV---ITDSAVFAMISRVN 269 (406)
Q Consensus 201 ~~ILT~g~---S~---tV~~~L~~A~~~~~~f~ViV~EsrP~~eG~~~a~~L~~~GI--~vt~---I~Dsav~~~m~~vd 269 (406)
-+|+..|+ .. .+.+++....+++.+++++++-..|..+- .+.+. .|+ .|++ +++..+..++..+|
T Consensus 199 ~~i~~~G~~~~~Kg~~~li~a~~~l~~~~~~~~l~i~G~g~~~~~---l~~~~-~~~~~~v~~~g~~~~~~~~~~~~~ad 274 (394)
T 3okp_A 199 PVIACNSRLVPRKGQDSLIKAMPQVIAARPDAQLLIVGSGRYEST---LRRLA-TDVSQNVKFLGRLEYQDMINTLAAAD 274 (394)
T ss_dssp CEEEEESCSCGGGCHHHHHHHHHHHHHHSTTCEEEEECCCTTHHH---HHHHT-GGGGGGEEEEESCCHHHHHHHHHHCS
T ss_pred eEEEEEeccccccCHHHHHHHHHHHHhhCCCeEEEEEcCchHHHH---HHHHH-hcccCeEEEcCCCCHHHHHHHHHhCC
Confidence 46777665 33 34444445555566788888866554322 22332 232 3443 34578899999999
Q ss_pred EEEEcceeEeeCCCcccccchHHHHHHHhhCCCceEE
Q 045642 270 MVIVGVHAVMANGGVIAPAGLHVLALAAKKHDVPFVV 306 (406)
Q Consensus 270 ~VllGAdav~~nG~vvnk~GT~~lAl~Ak~~~vPv~V 306 (406)
.+|+-... -.+|.. .-|.-...+=|-.+|+||++
T Consensus 275 ~~v~ps~~-~~~~~~--~e~~~~~~~Ea~a~G~PvI~ 308 (394)
T 3okp_A 275 IFAMPART-RGGGLD--VEGLGIVYLEAQACGVPVIA 308 (394)
T ss_dssp EEEECCCC-BGGGTB--CCSSCHHHHHHHHTTCCEEE
T ss_pred EEEecCcc-cccccc--ccccCcHHHHHHHcCCCEEE
Confidence 99885432 001111 11222334557778999997
No 376
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=35.53 E-value=83 Score=31.48 Aligned_cols=109 Identities=19% Similarity=0.267 Sum_probs=60.8
Q ss_pred HhcccCcEEEeccChHHHHHHHHHHHHcCC-ceEEEEecCCCCcchHHHHHHHHhCCCceEEE-cchHHHHHhhc-C--C
Q 045642 195 ELIHQNEVILTLGHSKFVKEFLCAAKEKKR-SFEVFIADGAPKFEGHILAKELDKKGLKAIVI-TDSAVFAMISR-V--N 269 (406)
Q Consensus 195 ~~I~~g~~ILT~g~S~tV~~~L~~A~~~~~-~f~ViV~EsrP~~eG~~~a~~L~~~GI~vt~I-~Dsav~~~m~~-v--d 269 (406)
..|..||.|...+.+..+.+++.......+ .-+|+++-+. .=|..+|+.|.+ +++|++| .|..-+..+.+ - .
T Consensus 204 t~i~~gD~v~~i~~~~~i~~~~~~~g~~~~~~~~v~I~GgG--~ig~~lA~~L~~-~~~v~iIE~d~~r~~~la~~l~~~ 280 (461)
T 4g65_A 204 TIIEADDEVFFVAASNHIRSVMSELQRLEKPYRRIMIVGGG--NIGASLAKRLEQ-TYSVKLIERNLQRAEKLSEELENT 280 (461)
T ss_dssp CBCCTTCEEEEEEETTTHHHHHHHTTGGGSCCCEEEEECCS--HHHHHHHHHHTT-TSEEEEEESCHHHHHHHHHHCTTS
T ss_pred ceecCCCEEEEEeccchHHHHHHhhccccccccEEEEEcch--HHHHHHHHHhhh-cCceEEEecCHHHHHHHHHHCCCc
Confidence 345678888888888888888776653322 2356666432 346778888854 5778777 33333322221 1 1
Q ss_pred EEEEccee----------EeeCCCcccccc----hHHHHHHHhhCCCceEEe
Q 045642 270 MVIVGVHA----------VMANGGVIAPAG----LHVLALAAKKHDVPFVVV 307 (406)
Q Consensus 270 ~VllGAda----------v~~nG~vvnk~G----T~~lAl~Ak~~~vPv~V~ 307 (406)
.|+-| |+ |-.--.+++-+| -..+|+.||++|+|=.++
T Consensus 281 ~Vi~G-D~td~~~L~ee~i~~~D~~ia~T~~De~Ni~~~llAk~~gv~kvIa 331 (461)
T 4g65_A 281 IVFCG-DAADQELLTEENIDQVDVFIALTNEDETNIMSAMLAKRMGAKKVMV 331 (461)
T ss_dssp EEEES-CTTCHHHHHHTTGGGCSEEEECCSCHHHHHHHHHHHHHTTCSEEEE
T ss_pred eEEec-cccchhhHhhcCchhhcEEEEcccCcHHHHHHHHHHHHcCCccccc
Confidence 23222 11 111112233333 467889999999885554
No 377
>1g2o_A Purine nucleoside phosphorylase; trimer, transition-state complex, transferase; HET: IMH; 1.75A {Mycobacterium tuberculosis} SCOP: c.56.2.1 PDB: 1i80_A* 1n3i_A* 3iom_A*
Probab=35.49 E-value=63 Score=30.10 Aligned_cols=69 Identities=16% Similarity=0.138 Sum_probs=45.3
Q ss_pred ChHHHHHHHHHHHHcCCceEEEEecCCCCcchHHHHHHHHhCCCceEEEcchHHHHHhhcCCEEEEcceeEeeCCCcccc
Q 045642 208 HSKFVKEFLCAAKEKKRSFEVFIADGAPKFEGHILAKELDKKGLKAIVITDSAVFAMISRVNMVIVGVHAVMANGGVIAP 287 (406)
Q Consensus 208 ~S~tV~~~L~~A~~~~~~f~ViV~EsrP~~eG~~~a~~L~~~GI~vt~I~Dsav~~~m~~vd~VllGAdav~~nG~vvnk 287 (406)
++..+.+.+.+++++ .+.-||+.-+.|.++-..-.+.++. +|||+|=
T Consensus 160 ~d~~L~~~~~~~a~~-~~~Gvy~~~~Gp~feT~aE~~~~~~------------------------~GadaVg-------- 206 (268)
T 1g2o_A 160 YSPRLRELARQSDPQ-LAEGVYAGLPGPHYETPAEIRMLQT------------------------LGADLVG-------- 206 (268)
T ss_dssp SCHHHHHHHHHHCTT-CEEEEEEECCCSSCCCHHHHHHHHH------------------------HTCSEEE--------
T ss_pred cCHHHHHHHHHHHHH-hCCCeEEEEeCCEEeCHHHHHHHHH------------------------cCCeEEe--------
Confidence 456666666666533 4455777888888776432333322 1566654
Q ss_pred cchHHHHHHHhhCCCceEEecC
Q 045642 288 AGLHVLALAAKKHDVPFVVVAS 309 (406)
Q Consensus 288 ~GT~~lAl~Ak~~~vPv~V~ae 309 (406)
+=|.+.|.+|+++++||.+++-
T Consensus 207 Me~~~ea~lA~~~gi~~~~i~~ 228 (268)
T 1g2o_A 207 MSTVHETIAARAAGAEVLGVSL 228 (268)
T ss_dssp SSSHHHHHHHHHTTCEEEEEEE
T ss_pred cCHHHHHHHHHHcCCCEEEEEE
Confidence 3468899999999999999863
No 378
>2epj_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.70A {Aeropyrum pernix} PDB: 2zsl_A* 2zsm_A*
Probab=35.49 E-value=62 Score=31.24 Aligned_cols=139 Identities=14% Similarity=0.150 Sum_probs=66.1
Q ss_pred HHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHhc-ccCcEEEeccChHHHHHHHHHHHH-cCCceEEEEecCCCCcchH
Q 045642 165 KKLKSELIKAVNELI--EDINTCREGIAEQAMELI-HQNEVILTLGHSKFVKEFLCAAKE-KKRSFEVFIADGAPKFEGH 240 (406)
Q Consensus 165 ~~~k~~l~~~i~~~~--~e~~~~~~~I~~~a~~~I-~~g~~ILT~g~S~tV~~~L~~A~~-~~~~f~ViV~EsrP~~eG~ 240 (406)
+++++.+.+.++... .-.......+++..++++ ....+++|.|.+..+..+++.|.. .++ -+|++.+ |.+.|.
T Consensus 75 ~~v~~a~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~v~~~~sgseA~~~al~~ar~~~~~-~~vi~~~--~~yhg~ 151 (434)
T 2epj_A 75 PRVLEAVEEALARGWLYGAPGEAEVLLAEKILGYVKRGGMIRFVNSGTEATMTAIRLARGYTGR-DLILKFD--GCYHGS 151 (434)
T ss_dssp HHHHHHHHHHHHTCSCCSSCCHHHHHHHHHHHHHHCTTCEEEEESSHHHHHHHHHHHHHHHHCC-CEEEEEE--TCCCCS
T ss_pred HHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHhCCCCCEEEEeCCHHHHHHHHHHHHHHhhCC-CeEEEEc--CCcCCC
Confidence 455666666554410 000111223333333444 344578888888888888887532 233 3677765 444442
Q ss_pred HH-HH--------HH---HhCCCc------eEEEc--c-hHHHHHhhc--CCEEEEcceeEeeCCCccc-ccch-HHHHH
Q 045642 241 IL-AK--------EL---DKKGLK------AIVIT--D-SAVFAMISR--VNMVIVGVHAVMANGGVIA-PAGL-HVLAL 295 (406)
Q Consensus 241 ~~-a~--------~L---~~~GI~------vt~I~--D-sav~~~m~~--vd~VllGAdav~~nG~vvn-k~GT-~~lAl 295 (406)
.. +. .+ ...|++ +..++ | .++-..+.+ -+..++=++-+..++|.+. .-+- ..++-
T Consensus 152 ~~~~~~~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~ 231 (434)
T 2epj_A 152 HDAVLVAAGSAAAHYGVPTSAGVPEAVARLTLVTPYNDVEALERVFAEYGDRIAGVIVEPVIANAGVIPPRREFLAALQR 231 (434)
T ss_dssp SGGGSEECC------CEESSTTCCHHHHTTEEEEETTCHHHHHHHHHHHGGGEEEEEECSSBCSSSCBCCCHHHHHHHHH
T ss_pred CHHHHHhcCCCccccCCCCCCCCCCcccCceEecCCCCHHHHHHHHHhCCCCEEEEEEeCCcCCCCccCCCHHHHHHHHH
Confidence 11 10 00 113542 44432 2 233334432 1222223334555555443 3332 34667
Q ss_pred HHhhCCCceEE
Q 045642 296 AAKKHDVPFVV 306 (406)
Q Consensus 296 ~Ak~~~vPv~V 306 (406)
+|++|++++++
T Consensus 232 l~~~~g~~lI~ 242 (434)
T 2epj_A 232 LSRESGALLIL 242 (434)
T ss_dssp HHHHHTCEEEE
T ss_pred HHHHcCCEEEE
Confidence 88999998876
No 379
>1qe5_A Pentosyltransferase; enzyme, purine nucleoside phosphorylase; 2.20A {Cellulomonas SP} SCOP: c.56.2.1 PDB: 1c3x_A
Probab=35.47 E-value=63 Score=30.03 Aligned_cols=69 Identities=16% Similarity=0.131 Sum_probs=45.4
Q ss_pred ChHHHHHHHHHHHHcCCceEEEEecCCCCcchHHHHHHHHhCCCceEEEcchHHHHHhhcCCEEEEcceeEeeCCCcccc
Q 045642 208 HSKFVKEFLCAAKEKKRSFEVFIADGAPKFEGHILAKELDKKGLKAIVITDSAVFAMISRVNMVIVGVHAVMANGGVIAP 287 (406)
Q Consensus 208 ~S~tV~~~L~~A~~~~~~f~ViV~EsrP~~eG~~~a~~L~~~GI~vt~I~Dsav~~~m~~vd~VllGAdav~~nG~vvnk 287 (406)
++..+.+.+.++++ ..+.-||+.-+.|.++-..-.+.++. +|||+|=
T Consensus 159 ~d~~L~~~~~~~a~-~~~~Gvy~~~~Gp~feT~aE~~~~r~------------------------~Gad~Vg-------- 205 (266)
T 1qe5_A 159 YSPRLRELAHRVDP-TLPEGVYAQFPGPHYETPAEVRMAGI------------------------LGADLVG-------- 205 (266)
T ss_dssp BCHHHHHHHHHHCT-TCCEEEEEECCCSSCCCHHHHHHHHH------------------------HTCSEEE--------
T ss_pred cCHHHHHHHHHHHH-HhCCCeEEEeeCCEEeCHHHHHHHHH------------------------cCCeEEe--------
Confidence 45666666666653 33446888888888775432222322 1566654
Q ss_pred cchHHHHHHHhhCCCceEEecC
Q 045642 288 AGLHVLALAAKKHDVPFVVVAS 309 (406)
Q Consensus 288 ~GT~~lAl~Ak~~~vPv~V~ae 309 (406)
+=|.+.|.+|+++++||.+++-
T Consensus 206 Me~~pea~lAr~~gi~~~~i~~ 227 (266)
T 1qe5_A 206 MSTTLEAIAARHCGLEVLGVSL 227 (266)
T ss_dssp SSSHHHHHHHHHTTCEEEEEEE
T ss_pred cChHHHHHHHHHCCCCEEEEEE
Confidence 3468899999999999999863
No 380
>3vh1_A Ubiquitin-like modifier-activating enzyme ATG7; autophagy, zinc binding, metal binding protein; 3.00A {Saccharomyces cerevisiae} PDB: 3vh2_A
Probab=35.43 E-value=2.4e+02 Score=29.41 Aligned_cols=98 Identities=15% Similarity=0.147 Sum_probs=65.5
Q ss_pred CcEEEeccChHHHHHHHHHHHHcCCceEEEEec------CCCCcc--------h----HHHHHHHHh--CCCceEEEcc-
Q 045642 200 NEVILTLGHSKFVKEFLCAAKEKKRSFEVFIAD------GAPKFE--------G----HILAKELDK--KGLKAIVITD- 258 (406)
Q Consensus 200 g~~ILT~g~S~tV~~~L~~A~~~~~~f~ViV~E------srP~~e--------G----~~~a~~L~~--~GI~vt~I~D- 258 (406)
+..||..|....=-.+++..+..|.. ++.+++ |....+ | ..+++.|.+ -+++++.+..
T Consensus 327 ~~kVLIVGaGGLGs~va~~La~aGVG-~ItLvD~D~Ve~SNL~RQ~L~~~~DvG~~KAeaaa~~L~~iNP~v~v~~~~~~ 405 (598)
T 3vh1_A 327 NTKVLLLGAGTLGCYVSRALIAWGVR-KITFVDNGTVSYSNPVRQALYNFEDCGKPKAELAAASLKRIFPLMDATGVKLS 405 (598)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTTTCC-EEEEECCSBCCTTSTTTSTTCCSTTCSSBHHHHHHHHHHHHCTTCEEEEECCC
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCC-EEEEECCCcccccccccccccchhhcCcHHHHHHHHHHHhHCCCcEEEEEecc
Confidence 46788888887777777777766743 344443 222222 3 356777877 3577776652
Q ss_pred ------------------hHHHHHhhcCCEEEEcceeEeeCCCcccccchHHHHHHHhhCCCceEEe
Q 045642 259 ------------------SAVFAMISRVNMVIVGVHAVMANGGVIAPAGLHVLALAAKKHDVPFVVV 307 (406)
Q Consensus 259 ------------------sav~~~m~~vd~VllGAdav~~nG~vvnk~GT~~lAl~Ak~~~vPv~V~ 307 (406)
..+..+++++|.||.+.|..-. -+.+..+|..+++|++..
T Consensus 406 I~~pgh~i~~~~~~~l~~~~l~~li~~~DvVvdatDn~~t---------R~lin~~c~~~~~plI~a 463 (598)
T 3vh1_A 406 IPMIGHKLVNEEAQHKDFDRLRALIKEHDIIFLLVDSRES---------RWLPSLLSNIENKTVINA 463 (598)
T ss_dssp CCCSSCCCCSHHHHHHHHHHHHHHHHHCSEEEECCSBGGG---------THHHHHHHHHTTCEEEEE
T ss_pred ccccCcccccccccccCHHHHHHHHhcCCEEEECCCCHHH---------HHHHHHHHHhcCCCEEEE
Confidence 2345677889999998776432 377888999999999975
No 381
>3auf_A Glycinamide ribonucleotide transformylase 1; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; 2.07A {Symbiobacterium toebii}
Probab=35.42 E-value=1.3e+02 Score=27.19 Aligned_cols=70 Identities=17% Similarity=0.219 Sum_probs=39.3
Q ss_pred EEeccChHHHHHHHHHHHHcCCceEEE-EecCCCCcchHHHHHHHHhCCCceEEEcc----------hHHHHHhh--cCC
Q 045642 203 ILTLGHSKFVKEFLCAAKEKKRSFEVF-IADGAPKFEGHILAKELDKKGLKAIVITD----------SAVFAMIS--RVN 269 (406)
Q Consensus 203 ILT~g~S~tV~~~L~~A~~~~~~f~Vi-V~EsrP~~eG~~~a~~L~~~GI~vt~I~D----------sav~~~m~--~vd 269 (406)
||..|..+....+|....+....++|. |+-.+|...|...| .+.||++.++.. ..+...++ ++|
T Consensus 27 ~l~SG~g~~~~~~l~~l~~~~~~~~I~~Vvt~~~~~~~~~~A---~~~gIp~~~~~~~~~~~r~~~~~~~~~~l~~~~~D 103 (229)
T 3auf_A 27 VLISGSGTNLQAILDGCREGRIPGRVAVVISDRADAYGLERA---RRAGVDALHMDPAAYPSRTAFDAALAERLQAYGVD 103 (229)
T ss_dssp EEESSCCHHHHHHHHHHHTTSSSEEEEEEEESSTTCHHHHHH---HHTTCEEEECCGGGSSSHHHHHHHHHHHHHHTTCS
T ss_pred EEEeCCcHHHHHHHHHHHhCCCCCeEEEEEcCCCchHHHHHH---HHcCCCEEEECcccccchhhccHHHHHHHHhcCCC
Confidence 333477777777777666332245554 33334655554433 568999987642 33334443 467
Q ss_pred EEEEcc
Q 045642 270 MVIVGV 275 (406)
Q Consensus 270 ~VllGA 275 (406)
.+++.+
T Consensus 104 liv~ag 109 (229)
T 3auf_A 104 LVCLAG 109 (229)
T ss_dssp EEEESS
T ss_pred EEEEcC
Confidence 776643
No 382
>2amh_A Septum formation protein MAF homologue, putative; domain alpha-beta motif, structural genomics, PSI, protein structure initiative; 2.00A {Trypanosoma brucei} SCOP: c.51.4.2
Probab=35.41 E-value=93 Score=27.84 Aligned_cols=97 Identities=15% Similarity=0.096 Sum_probs=59.7
Q ss_pred ccChHHHHHHHHHHHH-cCCceEEEEe---cCCCCcc-hHHHHHHHHhCCCceEEEcchHHHHHhhc--C----CEEEEc
Q 045642 206 LGHSKFVKEFLCAAKE-KKRSFEVFIA---DGAPKFE-GHILAKELDKKGLKAIVITDSAVFAMISR--V----NMVIVG 274 (406)
Q Consensus 206 ~g~S~tV~~~L~~A~~-~~~~f~ViV~---EsrP~~e-G~~~a~~L~~~GI~vt~I~Dsav~~~m~~--v----d~VllG 274 (406)
-|.|..=.++|..+.- +|..|+|+.. |+....+ -..++..|+..+-. ++..-+.. - +.+|||
T Consensus 15 AS~SPrR~eLL~~~~~~~gi~f~v~~~~iDE~~~~~~~p~~~v~~lA~~KA~-------av~~~~~~~~~~~~~~~~VIg 87 (207)
T 2amh_A 15 GTSSAFRANVLREHFGDRFRNFVLLPPDIDEKAYRAADPFELTESIARAKMK-------AVLEKARQHSPPISGPAIALT 87 (207)
T ss_dssp CCCCHHHHHHHHHHHTTTCSEEEECCCCCCGGGCCCSSHHHHHHHHHHHHHH-------HHHHHHHTC------CEEEEE
T ss_pred ccCCHHHHHHHHhhhhcCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHH-------HHHHHhcccccccCCCCEEEE
Confidence 4667666777777621 1578888754 3322222 25677777764410 11222211 1 568999
Q ss_pred ceeEee-CCCcccccchHHHH--HHHhhCCCceEEecC
Q 045642 275 VHAVMA-NGGVIAPAGLHVLA--LAAKKHDVPFVVVAS 309 (406)
Q Consensus 275 Adav~~-nG~vvnk~GT~~lA--l~Ak~~~vPv~V~ae 309 (406)
||.|.. ||-++.|-.+..-| ++.+..|...-|.+.
T Consensus 88 aDTvV~~~g~IlgKP~~~e~A~~mL~~lsG~~h~v~Tg 125 (207)
T 2amh_A 88 FDQVVVKGDEVREKPLSTEQCRSFIASYSGGGVRTVAT 125 (207)
T ss_dssp EEEEEEETTEEECSCSSHHHHHHHHHHHTTSEEEEEEE
T ss_pred ECeEEEECCEEcCCCCCHHHHHHHHHHhCCCcEEEEEE
Confidence 999874 88899999998776 566667777766544
No 383
>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}
Probab=35.33 E-value=1.1e+02 Score=29.09 Aligned_cols=107 Identities=17% Similarity=0.205 Sum_probs=64.2
Q ss_pred cCcEEEeccChHHHHHHHHHHHHcCCceEEEEecCCCCc----c--hHHHHHHHHhCCCceEEE-cc----hHHHHHhh-
Q 045642 199 QNEVILTLGHSKFVKEFLCAAKEKKRSFEVFIADGAPKF----E--GHILAKELDKKGLKAIVI-TD----SAVFAMIS- 266 (406)
Q Consensus 199 ~g~~ILT~g~S~tV~~~L~~A~~~~~~f~ViV~EsrP~~----e--G~~~a~~L~~~GI~vt~I-~D----sav~~~m~- 266 (406)
.|.+||+.|.|+.+=..+..... ....+|+++.-.+.. . -...++++.+.|-.+..+ .| .++..++.
T Consensus 44 ~gk~vlVTGas~GIG~aia~~La-~~Ga~Vvl~~r~~~~~~~l~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~ 122 (346)
T 3kvo_A 44 AGCTVFITGASRGIGKAIALKAA-KDGANIVIAAKTAQPHPKLLGTIYTAAEEIEAVGGKALPCIVDVRDEQQISAAVEK 122 (346)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHH-TTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHH
T ss_pred CCCEEEEeCCChHHHHHHHHHHH-HCCCEEEEEECChhhhhhhHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHH
Confidence 46788888988887666655442 234678877544432 1 246788888888777665 33 23444443
Q ss_pred ------cCCEEEEcceeEeeCCC-------------cccccchHHHHHHH----hhCCCceEEe
Q 045642 267 ------RVNMVIVGVHAVMANGG-------------VIAPAGLHVLALAA----KKHDVPFVVV 307 (406)
Q Consensus 267 ------~vd~VllGAdav~~nG~-------------vvnk~GT~~lAl~A----k~~~vPv~V~ 307 (406)
++|.||-.|-.. ..+. -+|-.|++.++.++ +..+.+-+|.
T Consensus 123 ~~~~~g~iDilVnnAG~~-~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~g~IV~ 185 (346)
T 3kvo_A 123 AIKKFGGIDILVNNASAI-SLTNTLDTPTKRLDLMMNVNTRGTYLASKACIPYLKKSKVAHILN 185 (346)
T ss_dssp HHHHHSCCCEEEECCCCC-CCCCTTTCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTCSSCEEEE
T ss_pred HHHHcCCCCEEEECCCCC-CCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCCCCEEEE
Confidence 678887766332 2222 24677888888776 3344454444
No 384
>3jvi_A Protein tyrosine phosphatase; niaid, ssgcid, seattle structural genomics center for infect disease, parasitic protozoan, dysentery; 1.80A {Entamoeba histolytica} PDB: 3js5_A* 3ily_A 3ido_A*
Probab=35.28 E-value=54 Score=27.94 Aligned_cols=71 Identities=11% Similarity=0.094 Sum_probs=49.5
Q ss_pred ccChHHHHHHHHHHHH-cC--CceEEEEecCCCCcch----HHHHHHHHhCCCceEEEcchHHHHHhhcCCEEEEcce
Q 045642 206 LGHSKFVKEFLCAAKE-KK--RSFEVFIADGAPKFEG----HILAKELDKKGLKAIVITDSAVFAMISRVNMVIVGVH 276 (406)
Q Consensus 206 ~g~S~tV~~~L~~A~~-~~--~~f~ViV~EsrP~~eG----~~~a~~L~~~GI~vt~I~Dsav~~~m~~vd~VllGAd 276 (406)
.++|...+.+|++..+ .| ..|+|.=+-+.|...| ....+.|.+.||+....+-.--...+...|.||.=.+
T Consensus 15 ~cRSpmAE~~~~~~~~~~gl~~~~~v~SAGt~~~~~G~~~~~~a~~~l~~~Gid~~~~ar~l~~~~~~~~DlIl~Md~ 92 (161)
T 3jvi_A 15 ICRSPAAEAVMKKVIQNHHLTEKYICDSAGTCSYHEGQQADSRMRKVGKSRGYQVDSISRPVVSSDFKNFDYIFAMDN 92 (161)
T ss_dssp SSHHHHHHHHHHHHHHHTTCGGGEEEEEEESCCTTTTCBCCHHHHHHHHHTTCCCCCBCCBCCHHHHHHCSEEEESSH
T ss_pred hhHHHHHHHHHHHHHHHcCCCCcEEEEeeecCCcccCCCCCHHHHHHHHHcCcCCCCeeeECCHHHhcCCCEEEEeCh
Confidence 4679999999988764 33 3688888888886555 5778899999998743222222345567888876543
No 385
>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A
Probab=35.27 E-value=55 Score=30.81 Aligned_cols=90 Identities=17% Similarity=0.173 Sum_probs=55.6
Q ss_pred CcEEEeccChHHHHHHHHHHHHcCCceEEEEecCCCCcchHHHHHHHHhCCCceEEEcchHHHHH-----hhcCCEEEEc
Q 045642 200 NEVILTLGHSKFVKEFLCAAKEKKRSFEVFIADGAPKFEGHILAKELDKKGLKAIVITDSAVFAM-----ISRVNMVIVG 274 (406)
Q Consensus 200 g~~ILT~g~S~tV~~~L~~A~~~~~~f~ViV~EsrP~~eG~~~a~~L~~~GI~vt~I~Dsav~~~-----m~~vd~VllG 274 (406)
...|+..|+.+.-..+.+...+.| . |+++|..|.. ++ +.+.|+++..- |..-... +.++|.|++.
T Consensus 115 ~~~viI~G~G~~g~~l~~~L~~~g--~-v~vid~~~~~-----~~-~~~~~~~~i~g-d~~~~~~L~~a~i~~a~~vi~~ 184 (336)
T 1lnq_A 115 SRHVVICGWSESTLECLRELRGSE--V-FVLAEDENVR-----KK-VLRSGANFVHG-DPTRVSDLEKANVRGARAVIVD 184 (336)
T ss_dssp -CEEEEESCCHHHHHHHTTGGGSC--E-EEEESCGGGH-----HH-HHHTTCEEEES-CTTSHHHHHHTCSTTEEEEEEC
T ss_pred cCCEEEECCcHHHHHHHHHHHhCC--c-EEEEeCChhh-----hh-HHhCCcEEEEe-CCCCHHHHHhcChhhccEEEEc
Confidence 456888898877777777666444 4 7888877642 34 56678775543 4332222 3456666654
Q ss_pred ceeEeeCCCcccccchHHHHHHHhhCCCceEEec
Q 045642 275 VHAVMANGGVIAPAGLHVLALAAKKHDVPFVVVA 308 (406)
Q Consensus 275 Adav~~nG~vvnk~GT~~lAl~Ak~~~vPv~V~a 308 (406)
.+ +..-+..+++.||+.+.+..+++
T Consensus 185 ~~---------~d~~n~~~~~~ar~~~~~~~iia 209 (336)
T 1lnq_A 185 LE---------SDSETIHCILGIRKIDESVRIIA 209 (336)
T ss_dssp CS---------SHHHHHHHHHHHHTTCTTSEEEE
T ss_pred CC---------ccHHHHHHHHHHHHHCCCCeEEE
Confidence 32 23456788899999987544443
No 386
>1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2
Probab=35.21 E-value=1.4e+02 Score=26.90 Aligned_cols=103 Identities=11% Similarity=0.124 Sum_probs=55.9
Q ss_pred EEeccChHHHHHHHHHHHHcCCc-eEEEEecCCCCcchHHHHHHHHhCCCceEEEcchHHHHHhhc-----CCEEEEcce
Q 045642 203 ILTLGHSKFVKEFLCAAKEKKRS-FEVFIADGAPKFEGHILAKELDKKGLKAIVITDSAVFAMISR-----VNMVIVGVH 276 (406)
Q Consensus 203 ILT~g~S~tV~~~L~~A~~~~~~-f~ViV~EsrP~~eG~~~a~~L~~~GI~vt~I~Dsav~~~m~~-----vd~VllGAd 276 (406)
||..|.++.+=..|.....+ +. .+|+++...+.... ...+....+..-+-....+..++.. +|.||--|-
T Consensus 2 vlVtGatG~iG~~l~~~L~~-~g~~~V~~~~r~~~~~~---~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~d~vi~~a~ 77 (310)
T 1eq2_A 2 IIVTGGAGFIGSNIVKALND-KGITDILVVDNLKDGTK---FVNLVDLNIADYMDKEDFLIQIMAGEEFGDVEAIFHEGA 77 (310)
T ss_dssp EEEETTTSHHHHHHHHHHHT-TTCCCEEEEECCSSGGG---GHHHHTSCCSEEEEHHHHHHHHHTTCCCSSCCEEEECCS
T ss_pred EEEEcCccHHHHHHHHHHHH-CCCcEEEEEccCCCCch---hhhcCcceeccccccHHHHHHHHhccccCCCcEEEECcc
Confidence 67778877776666554422 23 56777755443221 1223222233333333455566653 787776543
Q ss_pred eEeeC-CC-----cccccchHHHHHHHhhCCCceEEecC
Q 045642 277 AVMAN-GG-----VIAPAGLHVLALAAKKHDVPFVVVAS 309 (406)
Q Consensus 277 av~~n-G~-----vvnk~GT~~lAl~Ak~~~vPv~V~ae 309 (406)
..... .. -+|-.|+..++-+|+.+++.|+.++.
T Consensus 78 ~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~SS 116 (310)
T 1eq2_A 78 CSSTTEWDGKYMMDNNYQYSKELLHYCLEREIPFLYASS 116 (310)
T ss_dssp CCCTTCCCHHHHHHHTHHHHHHHHHHHHHHTCCEEEEEE
T ss_pred cccCcccCHHHHHHHHHHHHHHHHHHHHHcCCeEEEEee
Confidence 22110 00 13567899999999988885555543
No 387
>1byr_A Protein (endonuclease); phosphodiesterase,; 2.00A {Salmonella typhimurium} SCOP: d.136.1.1 PDB: 1bys_A
Probab=35.07 E-value=92 Score=25.29 Aligned_cols=49 Identities=12% Similarity=0.112 Sum_probs=34.8
Q ss_pred hHHHHHHHHHHHHcCCceEEEEecCCCC-cchHHHHHHHHhCCCceEEEc
Q 045642 209 SKFVKEFLCAAKEKKRSFEVFIADGAPK-FEGHILAKELDKKGLKAIVIT 257 (406)
Q Consensus 209 S~tV~~~L~~A~~~~~~f~ViV~EsrP~-~eG~~~a~~L~~~GI~vt~I~ 257 (406)
+..+...|..|.++|.+.+|++-..... .......+.|.+.|+++....
T Consensus 39 ~~~i~~aL~~a~~rGV~Vril~~~~~~~~~~~~~~~~~L~~~gv~v~~~~ 88 (155)
T 1byr_A 39 APDIMKALVAAKKRGVDVKIVIDERGNTGRASIAAMNYIANSGIPLRTDS 88 (155)
T ss_dssp CHHHHHHHHHHHHTTCEEEEEEESTTCCSHHHHHHHHHHHHTTCCEEEEC
T ss_pred CHHHHHHHHHHHHCCCEEEEEEeCccccccccHHHHHHHHHCCCeEEEcC
Confidence 4567788888888888888776544322 233567788999999987753
No 388
>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}
Probab=35.06 E-value=1.9e+02 Score=25.25 Aligned_cols=108 Identities=18% Similarity=0.200 Sum_probs=61.5
Q ss_pred cCcEEEeccChHHHHHHHHHH-HHcCCceEEEEecCCCCcchHHHHHHHHhCCCceEEE-cc----hHHHHHhh------
Q 045642 199 QNEVILTLGHSKFVKEFLCAA-KEKKRSFEVFIADGAPKFEGHILAKELDKKGLKAIVI-TD----SAVFAMIS------ 266 (406)
Q Consensus 199 ~g~~ILT~g~S~tV~~~L~~A-~~~~~~f~ViV~EsrP~~eG~~~a~~L~~~GI~vt~I-~D----sav~~~m~------ 266 (406)
.+.+||..|.|+.+=..+... .++| .+|+++...+ .....+++.|.+.|.++.++ .| ..+..++.
T Consensus 12 ~~k~vlItGasggiG~~la~~l~~~G--~~V~~~~r~~-~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 88 (260)
T 3awd_A 12 DNRVAIVTGGAQNIGLACVTALAEAG--ARVIIADLDE-AMATKAVEDLRMEGHDVSSVVMDVTNTESVQNAVRSVHEQE 88 (260)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTT--CEEEEEESCH-HHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCC--CEEEEEeCCH-HHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHc
Confidence 467788888887776655443 3334 6788876443 22345667777777666654 33 23444443
Q ss_pred -cCCEEEEcceeEeeCCCc-------------ccccchHHHHHHHhh----CCCceEEecC
Q 045642 267 -RVNMVIVGVHAVMANGGV-------------IAPAGLHVLALAAKK----HDVPFVVVAS 309 (406)
Q Consensus 267 -~vd~VllGAdav~~nG~v-------------vnk~GT~~lAl~Ak~----~~vPv~V~ae 309 (406)
++|.||--|-.....+.+ +|-.|+..++.++.. .+...+|...
T Consensus 89 ~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~s 149 (260)
T 3awd_A 89 GRVDILVACAGICISEVKAEDMTDGQWLKQVDINLNGMFRSCQAVGRIMLEQKQGVIVAIG 149 (260)
T ss_dssp SCCCEEEECCCCCCCSCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEC
T ss_pred CCCCEEEECCCCCCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcCCCEEEEEe
Confidence 578888765322112221 356788777766543 2445555443
No 389
>3l44_A Glutamate-1-semialdehyde 2,1-aminomutase 1; alpha beta class, PLP-dependent transferase-like, bacillus A csgid, porphyrin biosynthesis; HET: LLP; 2.05A {Bacillus anthracis} SCOP: c.67.1.0
Probab=34.98 E-value=84 Score=30.20 Aligned_cols=140 Identities=11% Similarity=0.168 Sum_probs=68.6
Q ss_pred HHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHhc-ccCcEEEeccChHHHHHHHHHHHHcCCceEEEEecCCCCcchHH
Q 045642 165 KKLKSELIKAVNELIE--DINTCREGIAEQAMELI-HQNEVILTLGHSKFVKEFLCAAKEKKRSFEVFIADGAPKFEGHI 241 (406)
Q Consensus 165 ~~~k~~l~~~i~~~~~--e~~~~~~~I~~~a~~~I-~~g~~ILT~g~S~tV~~~L~~A~~~~~~f~ViV~EsrP~~eG~~ 241 (406)
+++++.+.+.++.... --......+++..++++ ....+++|.|.|..+...|+.+.....+-+|++.+.. +.|..
T Consensus 74 p~v~~a~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~v~~~~sGsea~~~ai~~a~~~~~~~~vi~~~~~--yhg~~ 151 (434)
T 3l44_A 74 PHITKAITTAAENGVLYGTPTALEVKFAKMLKEAMPALDKVRFVNSGTEAVMTTIRVARAYTGRTKIMKFAGC--YHGHS 151 (434)
T ss_dssp HHHHHHHHHHHHHCSCCSSCCHHHHHHHHHHHHHCTTCSEEEEESSHHHHHHHHHHHHHHHHCCCEEEEETTC--CCCSS
T ss_pred HHHHHHHHHHHHhCcCCCCCCHHHHHHHHHHHHhCCCCCEEEEeCchHHHHHHHHHHHHHhhCCCEEEEEcCc--cCCCc
Confidence 5566666666654210 00111122333333444 3346788888888888888877642122356665432 22211
Q ss_pred H-HHHHH-----------hCCC------ceEEEc--c-hHHHHHhhc--CCEEEEcceeEeeCCCccc-ccch-HHHHHH
Q 045642 242 L-AKELD-----------KKGL------KAIVIT--D-SAVFAMISR--VNMVIVGVHAVMANGGVIA-PAGL-HVLALA 296 (406)
Q Consensus 242 ~-a~~L~-----------~~GI------~vt~I~--D-sav~~~m~~--vd~VllGAdav~~nG~vvn-k~GT-~~lAl~ 296 (406)
. +..+. ..|+ .+..++ | .++-..+.+ -+..++=++-+..+||.+. .-+- ..++-+
T Consensus 152 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l 231 (434)
T 3l44_A 152 DLVLVAAGSGPSTLGTPDSAGVPQSIAQEVITVPFNNVETLKEALDKWGHEVAAILVEPIVGNFGIVEPKPGFLEKVNEL 231 (434)
T ss_dssp GGGGBC-------CCCBSSTTCCHHHHTTEEEECTTCHHHHHHHHHHHGGGEEEEEECSSBCTTSCBCCCTTHHHHHHHH
T ss_pred HHHHhhcCCcccccCCCCcCCCCCcCCCceEecCcccHHHHHHHHHhCCCCEEEEEEcCCCCCCCCccCCHHHHHHHHHH
Confidence 0 00000 0122 333332 2 233334432 1233334455667777665 4442 346778
Q ss_pred HhhCCCceEE
Q 045642 297 AKKHDVPFVV 306 (406)
Q Consensus 297 Ak~~~vPv~V 306 (406)
|++|++++++
T Consensus 232 ~~~~~illI~ 241 (434)
T 3l44_A 232 VHEAGALVIY 241 (434)
T ss_dssp HHTTTCEEEE
T ss_pred HHHcCCEEEE
Confidence 9999998875
No 390
>3hdv_A Response regulator; PSI-II, structural genomics, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 2.09A {Pseudomonas putida} SCOP: c.23.1.0
Probab=34.88 E-value=1.4e+02 Score=22.96 Aligned_cols=79 Identities=14% Similarity=0.247 Sum_probs=47.5
Q ss_pred CceEEEEecCCCCcchHHHHHHHHhCCCceEEEcchHHHH-Hhh--c-CCEEEEcceeEeeCCCcccccchHHHHHHHhh
Q 045642 224 RSFEVFIADGAPKFEGHILAKELDKKGLKAIVITDSAVFA-MIS--R-VNMVIVGVHAVMANGGVIAPAGLHVLALAAKK 299 (406)
Q Consensus 224 ~~f~ViV~EsrP~~eG~~~a~~L~~~GI~vt~I~Dsav~~-~m~--~-vd~VllGAdav~~nG~vvnk~GT~~lAl~Ak~ 299 (406)
...+|.++|..|.. ...+...|.+.|+.|....+..-+. .+. . .|.||+..+- . ..-|--.+..+-+.
T Consensus 6 ~~~~ilivdd~~~~-~~~l~~~L~~~g~~v~~~~~~~~a~~~~~~~~~~dlvi~D~~l--~-----~~~g~~~~~~l~~~ 77 (136)
T 3hdv_A 6 ARPLVLVVDDNAVN-REALILYLKSRGIDAVGADGAEEARLYLHYQKRIGLMITDLRM--Q-----PESGLDLIRTIRAS 77 (136)
T ss_dssp -CCEEEEECSCHHH-HHHHHHHHHHTTCCEEEESSHHHHHHHHHHCTTEEEEEECSCC--S-----SSCHHHHHHHHHTS
T ss_pred CCCeEEEECCCHHH-HHHHHHHHHHcCceEEEeCCHHHHHHHHHhCCCCcEEEEeccC--C-----CCCHHHHHHHHHhc
Confidence 35688888887652 3456777888899988877654332 222 2 6677765432 2 22344444444332
Q ss_pred --CCCceEEecCC
Q 045642 300 --HDVPFVVVAST 310 (406)
Q Consensus 300 --~~vPv~V~aes 310 (406)
..+|+++++..
T Consensus 78 ~~~~~~ii~~s~~ 90 (136)
T 3hdv_A 78 ERAALSIIVVSGD 90 (136)
T ss_dssp TTTTCEEEEEESS
T ss_pred CCCCCCEEEEeCC
Confidence 56899998754
No 391
>3f0h_A Aminotransferase; RER070207000802, structural genomics, JOIN for structural genomics, JCSG; HET: MSE LLP; 1.70A {Eubacterium rectale}
Probab=34.79 E-value=2.7e+02 Score=25.53 Aligned_cols=98 Identities=12% Similarity=0.151 Sum_probs=50.5
Q ss_pred cEEE-eccChHHHHHHHHHHHHcCCceEEEEecCCCCcchHHHHHHHHhCCCceEEEcch--------HHHHHhh-cCCE
Q 045642 201 EVIL-TLGHSKFVKEFLCAAKEKKRSFEVFIADGAPKFEGHILAKELDKKGLKAIVITDS--------AVFAMIS-RVNM 270 (406)
Q Consensus 201 ~~IL-T~g~S~tV~~~L~~A~~~~~~f~ViV~EsrP~~eG~~~a~~L~~~GI~vt~I~Ds--------av~~~m~-~vd~ 270 (406)
++|+ |-|.+..+..+++.+.+.| -+|++.+ |..-|..+...+...|+++..++-. .+-..+. ++..
T Consensus 72 ~~i~~~~ggt~al~~~~~~~~~~g--d~vi~~~--~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~~~~~~~~ 147 (376)
T 3f0h_A 72 KAVFMTCSSTGSMEAVVMNCFTKK--DKVLVID--GGSFGHRFVQLCEIHEIPYVALKLEHGKKLTKEKLYEYDNQNFTG 147 (376)
T ss_dssp EEEEESSCHHHHHHHHHHHHCCTT--CCEEEEE--SSHHHHHHHHHHHHTTCCEEEEECCTTCCCCHHHHHTTTTSCCCE
T ss_pred eEEEEcCChhHHHHHHHHhccCCC--CeEEEEe--CChhhHHHHHHHHHcCCceEEEeCCCCCCCCHHHHHHhhccCceE
Confidence 4565 4444555555555554333 3566654 2223344445566678888776421 1222222 3334
Q ss_pred EEEcceeEeeCCCcccccchHHHHHHHhhCCCceEE
Q 045642 271 VIVGVHAVMANGGVIAPAGLHVLALAAKKHDVPFVV 306 (406)
Q Consensus 271 VllGAdav~~nG~vvnk~GT~~lAl~Ak~~~vPv~V 306 (406)
|++. ..=-..|.+.. -..++-+|+.+++++++
T Consensus 148 v~~~-~~~nptG~~~~---l~~i~~l~~~~~~~li~ 179 (376)
T 3f0h_A 148 LLVN-VDETSTAVLYD---TMMIGEFCKKNNMFFVC 179 (376)
T ss_dssp EEEE-SEETTTTEECC---HHHHHHHHHHTTCEEEE
T ss_pred EEEe-cccCCcceecC---HHHHHHHHHHcCCEEEE
Confidence 4332 21122333333 55677889999998887
No 392
>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}
Probab=34.78 E-value=38 Score=31.90 Aligned_cols=110 Identities=14% Similarity=0.021 Sum_probs=59.2
Q ss_pred cCcEEEeccChHHHHHHHHHHHHc-CCceEEEEecCCCCcc-h-H------HHHHHHHhCCCceEEEcc----hHHHHH-
Q 045642 199 QNEVILTLGHSKFVKEFLCAAKEK-KRSFEVFIADGAPKFE-G-H------ILAKELDKKGLKAIVITD----SAVFAM- 264 (406)
Q Consensus 199 ~g~~ILT~g~S~tV~~~L~~A~~~-~~~f~ViV~EsrP~~e-G-~------~~a~~L~~~GI~vt~I~D----sav~~~- 264 (406)
.+.+||+.|.++.+=..|.....+ ++..+|+++.-.+... . . .-...+...++.+ +..| .++..+
T Consensus 9 ~~~~vlVTGatG~IG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~Dl~d~~~~~~~~ 87 (362)
T 3sxp_A 9 ENQTILITGGAGFVGSNLAFHFQENHPKAKVVVLDKFRSNTLFSNNRPSSLGHFKNLIGFKGEV-IAADINNPLDLRRLE 87 (362)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHHCTTSEEEEEECCCCC-------CCCCCCGGGGTTCCSEE-EECCTTCHHHHHHHT
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhhCCCCeEEEEECCCccccccccchhhhhhhhhccccCceE-EECCCCCHHHHHHhh
Confidence 457888889888777766554422 2567888876443310 0 0 0011122223322 2233 234444
Q ss_pred hhcCCEEEEcceeEeeC-C-----CcccccchHHHHHHHhhCCCceEEecC
Q 045642 265 ISRVNMVIVGVHAVMAN-G-----GVIAPAGLHVLALAAKKHDVPFVVVAS 309 (406)
Q Consensus 265 m~~vd~VllGAdav~~n-G-----~vvnk~GT~~lAl~Ak~~~vPv~V~ae 309 (406)
..++|.||--|-.+-.. . --+|-.||..++-+|+..+++|+.++.
T Consensus 88 ~~~~D~vih~A~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~~V~~SS 138 (362)
T 3sxp_A 88 KLHFDYLFHQAAVSDTTMLNQELVMKTNYQAFLNLLEIARSKKAKVIYASS 138 (362)
T ss_dssp TSCCSEEEECCCCCGGGCCCHHHHHHHHTHHHHHHHHHHHHTTCEEEEEEE
T ss_pred ccCCCEEEECCccCCccccCHHHHHHHHHHHHHHHHHHHHHcCCcEEEeCc
Confidence 56677776554311100 0 014668999999999999999555443
No 393
>3jx9_A Putative phosphoheptose isomerase; YP_001815198.1, structura genomics, joint center for structural genomics, JCSG; HET: MSE; 1.95A {Exiguobacterium sibiricum 255-15}
Probab=34.65 E-value=81 Score=27.33 Aligned_cols=74 Identities=4% Similarity=-0.142 Sum_probs=41.3
Q ss_pred HHHHHHHHHHHhcccCcEEEeccC--hHHHHH-HHHHHHHc-C----------CceEEEEecCCCCcch--HHHHHHHHh
Q 045642 185 CREGIAEQAMELIHQNEVILTLGH--SKFVKE-FLCAAKEK-K----------RSFEVFIADGAPKFEG--HILAKELDK 248 (406)
Q Consensus 185 ~~~~I~~~a~~~I~~g~~ILT~g~--S~tV~~-~L~~A~~~-~----------~~f~ViV~EsrP~~eG--~~~a~~L~~ 248 (406)
..+..++..++-|.+|..|-.+|+ |..+.. ++..+.+- + +.-.|+++=|+-+..+ ..+|+.+++
T Consensus 23 ~I~~AA~llaqai~~~g~IyvfG~Ghs~~~~~e~~~~~e~l~~~~~~~~~~~i~~~D~vii~S~Sg~n~~~ie~A~~ake 102 (170)
T 3jx9_A 23 ELFDVVRLLAQALVGQGKVYLDAYGEFEGLYPMLSDGPDQMKRVTKIKDHKTLHAVDRVLIFTPDTERSDLLASLARYDA 102 (170)
T ss_dssp HHHHHHHHHHHHHHTTCCEEEEECGGGGGGTHHHHTSTTCCTTEEECCTTCCCCTTCEEEEEESCSCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCEEEEECCCcHHHHHHHHHcccCCccchhhhhhcCCCCCCCEEEEEeCCCCCHHHHHHHHHHHH
Confidence 334444444445567778877665 444333 33333210 0 1112333334444444 699999999
Q ss_pred CCCceEEEcc
Q 045642 249 KGLKAIVITD 258 (406)
Q Consensus 249 ~GI~vt~I~D 258 (406)
.|+++..|+-
T Consensus 103 ~G~~vIaITs 112 (170)
T 3jx9_A 103 WHTPYSIITL 112 (170)
T ss_dssp HTCCEEEEES
T ss_pred CCCcEEEEeC
Confidence 9999998876
No 394
>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}
Probab=34.58 E-value=1.1e+02 Score=27.63 Aligned_cols=100 Identities=13% Similarity=0.178 Sum_probs=63.1
Q ss_pred cCcEEEeccChHHHHHHHHHHHHcCCceEEEEecCCCCcchHHHHHHHHhCCCceEEE-cc----hHHHHHhh-------
Q 045642 199 QNEVILTLGHSKFVKEFLCAAKEKKRSFEVFIADGAPKFEGHILAKELDKKGLKAIVI-TD----SAVFAMIS------- 266 (406)
Q Consensus 199 ~g~~ILT~g~S~tV~~~L~~A~~~~~~f~ViV~EsrP~~eG~~~a~~L~~~GI~vt~I-~D----sav~~~m~------- 266 (406)
.|.++|+.|.|+-+=..+..... ....+|+++..++......++.+|.+.|..+..+ .| ..+..++.
T Consensus 30 ~gk~~lVTGas~GIG~aia~~la-~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 108 (271)
T 3v2g_A 30 AGKTAFVTGGSRGIGAAIAKRLA-LEGAAVALTYVNAAERAQAVVSEIEQAGGRAVAIRADNRDAEAIEQAIRETVEALG 108 (271)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHH-HTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEeCCCcHHHHHHHHHHH-HCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 56788888888877665544431 2346788887776555567888888888777655 33 23334443
Q ss_pred cCCEEEEcceeEeeCCCc-------------ccccchHHHHHHHhhC
Q 045642 267 RVNMVIVGVHAVMANGGV-------------IAPAGLHVLALAAKKH 300 (406)
Q Consensus 267 ~vd~VllGAdav~~nG~v-------------vnk~GT~~lAl~Ak~~ 300 (406)
++|.+|-.|- +...+.+ +|-.|++.++.++..+
T Consensus 109 ~iD~lvnnAg-~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~ 154 (271)
T 3v2g_A 109 GLDILVNSAG-IWHSAPLEETTVADFDEVMAVNFRAPFVAIRSASRH 154 (271)
T ss_dssp CCCEEEECCC-CCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred CCcEEEECCC-CCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 6888877663 3333331 3667888777666543
No 395
>1tcv_A Purine-nucleoside phosphorylase; transferase; HET: NDS; 1.75A {Schistosoma mansoni} PDB: 1tcu_A* 1td1_A 3djf_A* 3e0q_A* 3e9r_A* 3e9z_A* 3f8w_A* 3faz_A* 3fb1_A* 3fnq_A* 3iex_A*
Probab=34.54 E-value=82 Score=29.59 Aligned_cols=70 Identities=14% Similarity=0.174 Sum_probs=43.6
Q ss_pred ChHHHHHHHHHHHH---cCCceE--EEEecCCCCcchHHHHHHHHhCCCceEEEcchHHHHHhhcCCEEEEcceeEeeCC
Q 045642 208 HSKFVKEFLCAAKE---KKRSFE--VFIADGAPKFEGHILAKELDKKGLKAIVITDSAVFAMISRVNMVIVGVHAVMANG 282 (406)
Q Consensus 208 ~S~tV~~~L~~A~~---~~~~f~--ViV~EsrP~~eG~~~a~~L~~~GI~vt~I~Dsav~~~m~~vd~VllGAdav~~nG 282 (406)
++..+.+.+.++++ .+.+++ ||++-+.|.++-..-.+.++.. |||+|=
T Consensus 168 ~d~~L~~~~~~~a~~~~~~~~~~~Gvy~~~~Gp~feT~aE~~~~r~~------------------------Gad~Vg--- 220 (287)
T 1tcv_A 168 YDRDLRKLAVQVAEENGFGNLVHQGVYVMNGGPCYETPAECTMLLNM------------------------GCDVVG--- 220 (287)
T ss_dssp BCHHHHHHHHHHHHHTTCGGGEEEEEEEECCCSSCCCHHHHHHHHHT------------------------TCSEEE---
T ss_pred cCHHHHHHHHHHHhhhcCCCceeeEEEEEecCCccCCHHHHHHHHHc------------------------CCcEEc---
Confidence 35556666666553 222333 6777778877764323333321 555554
Q ss_pred CcccccchHHHHHHHhhCCCceEEecC
Q 045642 283 GVIAPAGLHVLALAAKKHDVPFVVVAS 309 (406)
Q Consensus 283 ~vvnk~GT~~lAl~Ak~~~vPv~V~ae 309 (406)
+=|.+.|.+|+++++||.+++-
T Consensus 221 -----Me~~~ea~vA~~~gi~~~~i~~ 242 (287)
T 1tcv_A 221 -----MSTIPEVVIARHCGIQVFAVSL 242 (287)
T ss_dssp -----SSSHHHHHHHHHTTCEEEEEEE
T ss_pred -----ccHHHHHHHHHHCCCCEEEEEE
Confidence 3468899999999999999864
No 396
>3cg0_A Response regulator receiver modulated diguanylate with PAS/PAC sensor; signal receiver domain, diguanylate cyclase; 2.15A {Desulfovibrio desulfuricans subsp}
Probab=34.45 E-value=91 Score=24.06 Aligned_cols=81 Identities=16% Similarity=0.219 Sum_probs=46.8
Q ss_pred CCceEEEEecCCCCcchHHHHHHHHhCCCceEE-EcchHH--HHHh-hcCCEEEEcceeEeeCCCcccccchHHHHHHHh
Q 045642 223 KRSFEVFIADGAPKFEGHILAKELDKKGLKAIV-ITDSAV--FAMI-SRVNMVIVGVHAVMANGGVIAPAGLHVLALAAK 298 (406)
Q Consensus 223 ~~~f~ViV~EsrP~~eG~~~a~~L~~~GI~vt~-I~Dsav--~~~m-~~vd~VllGAdav~~nG~vvnk~GT~~lAl~Ak 298 (406)
....+|.++|..|.. ...+...|.+.|+.+.. ..+..- ..+- ...|.||+..+- .+ ..-|.-.+..+.+
T Consensus 7 ~~~~~iLivdd~~~~-~~~l~~~L~~~g~~v~~~~~~~~~a~~~~~~~~~dlii~d~~~--~~----~~~g~~~~~~l~~ 79 (140)
T 3cg0_A 7 DDLPGVLIVEDGRLA-AATLRIQLESLGYDVLGVFDNGEEAVRCAPDLRPDIALVDIML--CG----ALDGVETAARLAA 79 (140)
T ss_dssp -CCCEEEEECCBHHH-HHHHHHHHHHHTCEEEEEESSHHHHHHHHHHHCCSEEEEESSC--CS----SSCHHHHHHHHHH
T ss_pred CCCceEEEEECCHHH-HHHHHHHHHHCCCeeEEEECCHHHHHHHHHhCCCCEEEEecCC--CC----CCCHHHHHHHHHh
Confidence 345778888877642 23556667777888874 554322 2222 247888887542 10 1234444444444
Q ss_pred hCCCceEEecCC
Q 045642 299 KHDVPFVVVAST 310 (406)
Q Consensus 299 ~~~vPv~V~aes 310 (406)
...+|+++++..
T Consensus 80 ~~~~~ii~ls~~ 91 (140)
T 3cg0_A 80 GCNLPIIFITSS 91 (140)
T ss_dssp HSCCCEEEEECC
T ss_pred CCCCCEEEEecC
Confidence 478999998764
No 397
>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*
Probab=34.38 E-value=59 Score=30.94 Aligned_cols=104 Identities=13% Similarity=0.017 Sum_probs=59.4
Q ss_pred CcEEEeccChHHHHHHHHHH-HHcCCceEEEEecCCCCcchHHHHHHHHhCCCceEEE--cc-hHHHHHhhcCCEEEEcc
Q 045642 200 NEVILTLGHSKFVKEFLCAA-KEKKRSFEVFIADGAPKFEGHILAKELDKKGLKAIVI--TD-SAVFAMISRVNMVIVGV 275 (406)
Q Consensus 200 g~~ILT~g~S~tV~~~L~~A-~~~~~~f~ViV~EsrP~~eG~~~a~~L~~~GI~vt~I--~D-sav~~~m~~vd~VllGA 275 (406)
+.+||..|.++.+=..|... .++| .+|+++.-.+...- .+...++.+... .| .++..++.++|.||--|
T Consensus 29 ~~~vlVtGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~-----~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~Vih~A 101 (379)
T 2c5a_A 29 NLKISITGAGGFIASHIARRLKHEG--HYVIASDWKKNEHM-----TEDMFCDEFHLVDLRVMENCLKVTEGVDHVFNLA 101 (379)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTT--CEEEEEESSCCSSS-----CGGGTCSEEEECCTTSHHHHHHHHTTCSEEEECC
T ss_pred CCeEEEECCccHHHHHHHHHHHHCC--CeEEEEECCCccch-----hhccCCceEEECCCCCHHHHHHHhCCCCEEEECc
Confidence 45788889887776665443 3344 67887765443210 111234443321 22 34566677888887655
Q ss_pred eeEee----CCC-----cccccchHHHHHHHhhCCCceEEecCC
Q 045642 276 HAVMA----NGG-----VIAPAGLHVLALAAKKHDVPFVVVAST 310 (406)
Q Consensus 276 dav~~----nG~-----vvnk~GT~~lAl~Ak~~~vPv~V~aes 310 (406)
-.... ... -+|-.||..+.-+|+..+++-+|...+
T Consensus 102 ~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~~~~V~~SS 145 (379)
T 2c5a_A 102 ADMGGMGFIQSNHSVIMYNNTMISFNMIEAARINGIKRFFYASS 145 (379)
T ss_dssp CCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEE
T ss_pred eecCcccccccCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEee
Confidence 32210 000 136678999999999999865555444
No 398
>2nv0_A Glutamine amidotransferase subunit PDXT; 3-layer(ABA) sandwich, rossmann fold, glutaminase; 1.73A {Bacillus subtilis} SCOP: c.23.16.1 PDB: 1r9g_A 2nv2_B*
Probab=34.33 E-value=52 Score=28.34 Aligned_cols=77 Identities=9% Similarity=0.082 Sum_probs=45.2
Q ss_pred EEEEecCCCCcchHHHHHHHHhCCCceEEEcchHHHHHhhcCCEEEEcceeEeeCCCccc-------ccchHHHHHHHhh
Q 045642 227 EVFIADGAPKFEGHILAKELDKKGLKAIVITDSAVFAMISRVNMVIVGVHAVMANGGVIA-------PAGLHVLALAAKK 299 (406)
Q Consensus 227 ~ViV~EsrP~~eG~~~a~~L~~~GI~vt~I~Dsav~~~m~~vd~VllGAdav~~nG~vvn-------k~GT~~lAl~Ak~ 299 (406)
+|.|++-...+ ......|.+.|+++.++.... -+.++|.++++ ||--. ..+...+...+..
T Consensus 3 ~I~il~~~~~~--~~~~~~l~~~g~~~~~~~~~~---~l~~~d~iil~-------GG~~~~~~~~~~~~~~~~~i~~~~~ 70 (196)
T 2nv0_A 3 TIGVLGLQGAV--REHIHAIEACGAAGLVVKRPE---QLNEVDGLILP-------GGESTTMRRLIDTYQFMEPLREFAA 70 (196)
T ss_dssp EEEEECSSSCC--HHHHHHHHHTTCEEEEECSGG---GGGGCSEEEEC-------CSCHHHHHHHHHHTTCHHHHHHHHH
T ss_pred EEEEEEccCCc--HHHHHHHHHCCCEEEEeCChH---HHhhCCEEEEC-------CCChhhHHHHhhhHHHHHHHHHHHH
Confidence 56666642122 234588888999998887532 25677877774 33211 1222233334446
Q ss_pred CCCceEEecCCccccc
Q 045642 300 HDVPFVVVASTHELCS 315 (406)
Q Consensus 300 ~~vPv~V~aes~K~~~ 315 (406)
.++|++.+|--+.+--
T Consensus 71 ~~~pilgIC~G~q~l~ 86 (196)
T 2nv0_A 71 QGKPMFGTCAGLIILA 86 (196)
T ss_dssp TTCCEEEETHHHHHHS
T ss_pred CCCcEEEECHHHHHHH
Confidence 7999999987665543
No 399
>3t6k_A Response regulator receiver; flavodoxin-like, structural genomics, joint center for struc genomics, JCSG, protein structure initiative; HET: MSE; 1.86A {Chloroflexus aurantiacus} SCOP: c.23.1.0
Probab=34.29 E-value=1.4e+02 Score=23.11 Aligned_cols=78 Identities=13% Similarity=0.211 Sum_probs=45.1
Q ss_pred ceEEEEecCCCCcchHHHHHHHHhCCCceEEEcchHHHH-Hh--hcCCEEEEcceeEeeCCCcccccchHHHHHHHh---
Q 045642 225 SFEVFIADGAPKFEGHILAKELDKKGLKAIVITDSAVFA-MI--SRVNMVIVGVHAVMANGGVIAPAGLHVLALAAK--- 298 (406)
Q Consensus 225 ~f~ViV~EsrP~~eG~~~a~~L~~~GI~vt~I~Dsav~~-~m--~~vd~VllGAdav~~nG~vvnk~GT~~lAl~Ak--- 298 (406)
..+|.|+|..|.. ...+...|.+.|..|....+..-+. .+ ...|.||+..+ +++ .-|.-.+..+-+
T Consensus 4 ~~~iLivdd~~~~-~~~l~~~L~~~g~~v~~~~~~~~al~~~~~~~~dlvl~D~~--lp~-----~~g~~~~~~lr~~~~ 75 (136)
T 3t6k_A 4 PHTLLIVDDDDTV-AEMLELVLRGAGYEVRRAASGEEALQQIYKNLPDALICDVL--LPG-----IDGYTLCKRVRQHPL 75 (136)
T ss_dssp CCEEEEECSCHHH-HHHHHHHHHHTTCEEEEESSHHHHHHHHHHSCCSEEEEESC--CSS-----SCHHHHHHHHHHSGG
T ss_pred CCEEEEEeCCHHH-HHHHHHHHHHCCCEEEEeCCHHHHHHHHHhCCCCEEEEeCC--CCC-----CCHHHHHHHHHcCCC
Confidence 3567777777643 2355666777788777666643322 22 24788887543 332 234444444433
Q ss_pred hCCCceEEecCC
Q 045642 299 KHDVPFVVVAST 310 (406)
Q Consensus 299 ~~~vPv~V~aes 310 (406)
...+|+++++..
T Consensus 76 ~~~~pii~~t~~ 87 (136)
T 3t6k_A 76 TKTLPILMLTAQ 87 (136)
T ss_dssp GTTCCEEEEECT
T ss_pred cCCccEEEEecC
Confidence 247999998764
No 400
>1qdl_B Protein (anthranilate synthase (TRPG-SUBUNIT)); tryptophan biosynthesis, glutamine amidotransferase, allosteric interaction, lyase; 2.50A {Sulfolobus solfataricus} SCOP: c.23.16.1
Probab=34.20 E-value=2e+02 Score=24.54 Aligned_cols=76 Identities=17% Similarity=0.159 Sum_probs=44.1
Q ss_pred EEEecCCCCcchHHHHHHHHhCCCceEEEcchH--HHHHhh-cCCEEEE-cceeEeeCCCccc--ccchH-HHHHHHhhC
Q 045642 228 VFIADGAPKFEGHILAKELDKKGLKAIVITDSA--VFAMIS-RVNMVIV-GVHAVMANGGVIA--PAGLH-VLALAAKKH 300 (406)
Q Consensus 228 ViV~EsrP~~eG~~~a~~L~~~GI~vt~I~Dsa--v~~~m~-~vd~Vll-GAdav~~nG~vvn--k~GT~-~lAl~Ak~~ 300 (406)
|.|++....+ ...+++.|.+.|+.++++.... ...+.. ++|.+|+ |.- |+... ..|-. .+.-.+ ..
T Consensus 4 i~iid~~~s~-~~~~~~~l~~~G~~~~v~~~~~~~~~~~~~~~~dglil~gG~-----~~~~~~~~~~~~~~~i~~~-~~ 76 (195)
T 1qdl_B 4 TLIIDNYDSF-VYNIAQIVGELGSYPIVIRNDEISIKGIERIDPDRLIISPGP-----GTPEKREDIGVSLDVIKYL-GK 76 (195)
T ss_dssp EEEEECSCSS-HHHHHHHHHHTTCEEEEEETTTSCHHHHHHHCCSEEEECCCS-----SCTTSHHHHTTHHHHHHHH-TT
T ss_pred EEEEECCCch-HHHHHHHHHhCCCEEEEEeCCCCCHHHHhhCCCCEEEECCCC-----CChhhhhhhhHHHHHHHHh-cC
Confidence 5666644443 3577899999999999887653 222322 6899988 431 11111 12322 222222 56
Q ss_pred CCceEEecCC
Q 045642 301 DVPFVVVAST 310 (406)
Q Consensus 301 ~vPv~V~aes 310 (406)
++|++-+|--
T Consensus 77 ~~PvLGIC~G 86 (195)
T 1qdl_B 77 RTPILGVCLG 86 (195)
T ss_dssp TSCEEEETHH
T ss_pred CCcEEEEehH
Confidence 8999988843
No 401
>1gpw_B Amidotransferase HISH; lyase/transferase, complex (lyase/transferase), histidine biosynthesis, glutaminase, glutamine amidotransferase; 2.4A {Thermotoga maritima} SCOP: c.23.16.1 PDB: 1k9v_F 1kxj_A 2wjz_B
Probab=34.15 E-value=79 Score=27.28 Aligned_cols=76 Identities=9% Similarity=-0.001 Sum_probs=43.3
Q ss_pred EEEEecCCCCcchHHHHHHHHhCC-----CceEEEcchHHHHHhhcCCEEEEcceeEeeCCCcccc-------cchHHHH
Q 045642 227 EVFIADGAPKFEGHILAKELDKKG-----LKAIVITDSAVFAMISRVNMVIVGVHAVMANGGVIAP-------AGLHVLA 294 (406)
Q Consensus 227 ~ViV~EsrP~~eG~~~a~~L~~~G-----I~vt~I~Dsav~~~m~~vd~VllGAdav~~nG~vvnk-------~GT~~lA 294 (406)
+|.|++- +...-..+.+.|.+.| ++++++.+.. - .++|.+|+.- |+.... .|...+.
T Consensus 2 ~I~iid~-~~g~~~s~~~~l~~~G~~~~~~~~~~~~~~~---~-~~~dglilpG------~g~~~~~~~~l~~~~~~~~i 70 (201)
T 1gpw_B 2 RIGIISV-GPGNIMNLYRGVKRASENFEDVSIELVESPR---N-DLYDLLFIPG------VGHFGEGMRRLRENDLIDFV 70 (201)
T ss_dssp EEEEECC-SSSCCHHHHHHHHHHSTTBSSCEEEEECSCC---S-SCCSEEEECC------CSCSHHHHHHHHHTTCHHHH
T ss_pred EEEEEec-CCchHHHHHHHHHHcCCCCCceEEEEECCCc---c-cCCCEEEECC------CCcHHHHHHHHHhhCHHHHH
Confidence 4556652 2111156778888889 9999987643 1 4667666632 122111 1233333
Q ss_pred HHHhhCCCceEEecCCccc
Q 045642 295 LAAKKHDVPFVVVASTHEL 313 (406)
Q Consensus 295 l~Ak~~~vPv~V~aes~K~ 313 (406)
..|...++|++-+|--+.+
T Consensus 71 ~~~~~~~~PilGIC~G~Ql 89 (201)
T 1gpw_B 71 RKHVEDERYVVGVCLGMQL 89 (201)
T ss_dssp HHHHHTTCEEEEETHHHHT
T ss_pred HHHHHcCCeEEEEChhHHH
Confidence 3344678999998865544
No 402
>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*
Probab=34.10 E-value=49 Score=31.42 Aligned_cols=106 Identities=14% Similarity=0.036 Sum_probs=57.3
Q ss_pred cCcEEEeccChHHHHHHHHHH-HHcCCceEEEEecCCCCcchHHHHHHHHhCCCceEEE-cc----hHHHHHhhcCCEEE
Q 045642 199 QNEVILTLGHSKFVKEFLCAA-KEKKRSFEVFIADGAPKFEGHILAKELDKKGLKAIVI-TD----SAVFAMISRVNMVI 272 (406)
Q Consensus 199 ~g~~ILT~g~S~tV~~~L~~A-~~~~~~f~ViV~EsrP~~eG~~~a~~L~~~GI~vt~I-~D----sav~~~m~~vd~Vl 272 (406)
.+.+||+.|.++.+=..|... .++| ..+|+++...+...- ..|. .+-.+.++ .| ..+..++.++|.||
T Consensus 31 ~~~~ilVtGatG~iG~~l~~~L~~~g-~~~V~~~~r~~~~~~----~~l~-~~~~v~~~~~Dl~d~~~l~~~~~~~d~Vi 104 (377)
T 2q1s_A 31 ANTNVMVVGGAGFVGSNLVKRLLELG-VNQVHVVDNLLSAEK----INVP-DHPAVRFSETSITDDALLASLQDEYDYVF 104 (377)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTT-CSEEEEECCCTTCCG----GGSC-CCTTEEEECSCTTCHHHHHHCCSCCSEEE
T ss_pred CCCEEEEECCccHHHHHHHHHHHHcC-CceEEEEECCCCCch----hhcc-CCCceEEEECCCCCHHHHHHHhhCCCEEE
Confidence 356788889888776666544 3333 268888765443211 1111 12233333 23 23444556666666
Q ss_pred EcceeEeeCC--------CcccccchHHHHHHHhhC-CCceEEecCC
Q 045642 273 VGVHAVMANG--------GVIAPAGLHVLALAAKKH-DVPFVVVAST 310 (406)
Q Consensus 273 lGAdav~~nG--------~vvnk~GT~~lAl~Ak~~-~vPv~V~aes 310 (406)
--|-....+. --+|-.|+..++-+|+.. +++-+|.+.+
T Consensus 105 h~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~V~~SS 151 (377)
T 2q1s_A 105 HLATYHGNQSSIHDPLADHENNTLTTLKLYERLKHFKRLKKVVYSAA 151 (377)
T ss_dssp ECCCCSCHHHHHHCHHHHHHHHTHHHHHHHHHHTTCSSCCEEEEEEE
T ss_pred ECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEeCC
Confidence 5442211000 013567899999999998 8765555444
No 403
>1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A*
Probab=34.03 E-value=53 Score=31.21 Aligned_cols=112 Identities=16% Similarity=0.090 Sum_probs=59.0
Q ss_pred hcccCcEEEeccChHHHHHHHHHH-HHcCCceEEEEecCCCCcch---------------HHHHHH---HHhCCCceEEE
Q 045642 196 LIHQNEVILTLGHSKFVKEFLCAA-KEKKRSFEVFIADGAPKFEG---------------HILAKE---LDKKGLKAIVI 256 (406)
Q Consensus 196 ~I~~g~~ILT~g~S~tV~~~L~~A-~~~~~~f~ViV~EsrP~~eG---------------~~~a~~---L~~~GI~vt~I 256 (406)
+.+++..||+.|.+..+=..|... .++| .+|+++.-.+.... ...... +...++.+. .
T Consensus 7 ~~~~~~~vlVTG~tGfIG~~l~~~L~~~G--~~V~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~-~ 83 (404)
T 1i24_A 7 HHHHGSRVMVIGGDGYCGWATALHLSKKN--YEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTGKSIELY-V 83 (404)
T ss_dssp -----CEEEEETTTSHHHHHHHHHHHHTT--CEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHCCCCEEE-E
T ss_pred cccCCCeEEEeCCCcHHHHHHHHHHHhCC--CeEEEEEecCccccccccccccccccchhhhhhhhHhhccCCceEEE-E
Confidence 556788999999888776666443 3334 67888754322110 001111 222344332 2
Q ss_pred cc----hHHHHHhhc--CCEEEEcceeEeeC---CC--------cccccchHHHHHHHhhCCCc-eEEecCC
Q 045642 257 TD----SAVFAMISR--VNMVIVGVHAVMAN---GG--------VIAPAGLHVLALAAKKHDVP-FVVVAST 310 (406)
Q Consensus 257 ~D----sav~~~m~~--vd~VllGAdav~~n---G~--------vvnk~GT~~lAl~Ak~~~vP-v~V~aes 310 (406)
.| .++..++.. +|.||--|-..... .. -+|-.||..+.-+|+.++++ -+|...|
T Consensus 84 ~Dl~d~~~~~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~~~~~V~~SS 155 (404)
T 1i24_A 84 GDICDFEFLAESFKSFEPDSVVHFGEQRSAPYSMIDRSRAVYTQHNNVIGTLNVLFAIKEFGEECHLVKLGT 155 (404)
T ss_dssp SCTTSHHHHHHHHHHHCCSEEEECCSCCCHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEECC
T ss_pred CCCCCHHHHHHHHhccCCCEEEECCCCCCccchhhCccchhhhHHHHHHHHHHHHHHHHHhCCCcEEEEeCc
Confidence 33 345566766 88888765321100 00 24778999999999888862 4444444
No 404
>3kto_A Response regulator receiver protein; PSI-II,structural genomics, protein structure initiative; 1.98A {Pseudoalteromonas atlantica T6C} SCOP: c.23.1.0
Probab=33.96 E-value=81 Score=24.54 Aligned_cols=80 Identities=18% Similarity=0.270 Sum_probs=43.8
Q ss_pred ceEEEEecCCCCcchHHHHHHHHhCCCceEEEcchHHHHH-hh--cCCEEEEcceeEeeCCCcccccchHHHHHHHhh-C
Q 045642 225 SFEVFIADGAPKFEGHILAKELDKKGLKAIVITDSAVFAM-IS--RVNMVIVGVHAVMANGGVIAPAGLHVLALAAKK-H 300 (406)
Q Consensus 225 ~f~ViV~EsrP~~eG~~~a~~L~~~GI~vt~I~Dsav~~~-m~--~vd~VllGAdav~~nG~vvnk~GT~~lAl~Ak~-~ 300 (406)
..+|.|+|..|.. ...+...|.+.|+.|....+..-+.- +. ..|.||+..+ +.+| ..-|.-.+..+-+. .
T Consensus 6 ~~~ilivdd~~~~-~~~l~~~L~~~g~~v~~~~~~~~a~~~l~~~~~dlvi~D~~--l~~~---~~~g~~~~~~l~~~~~ 79 (136)
T 3kto_A 6 HPIIYLVDHQKDA-RAALSKLLSPLDVTIQCFASAESFMRQQISDDAIGMIIEAH--LEDK---KDSGIELLETLVKRGF 79 (136)
T ss_dssp -CEEEEECSCHHH-HHHHHHHHTTSSSEEEEESSHHHHTTSCCCTTEEEEEEETT--GGGB---TTHHHHHHHHHHHTTC
T ss_pred CCeEEEEcCCHHH-HHHHHHHHHHCCcEEEEeCCHHHHHHHHhccCCCEEEEeCc--CCCC---CccHHHHHHHHHhCCC
Confidence 4577888776643 23456667777888776665433322 22 3566666432 2221 03344444443333 4
Q ss_pred CCceEEecCC
Q 045642 301 DVPFVVVAST 310 (406)
Q Consensus 301 ~vPv~V~aes 310 (406)
.+|+++++..
T Consensus 80 ~~~ii~~s~~ 89 (136)
T 3kto_A 80 HLPTIVMASS 89 (136)
T ss_dssp CCCEEEEESS
T ss_pred CCCEEEEEcC
Confidence 7999998864
No 405
>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A*
Probab=33.88 E-value=84 Score=29.33 Aligned_cols=106 Identities=11% Similarity=0.126 Sum_probs=56.6
Q ss_pred CcEEEeccChHHHHHHHHHHH-HcCCceEEEEecCCCCcchHHHHHHHHhCCCceEEEcchHHHHHhh-----cCCEEEE
Q 045642 200 NEVILTLGHSKFVKEFLCAAK-EKKRSFEVFIADGAPKFEGHILAKELDKKGLKAIVITDSAVFAMIS-----RVNMVIV 273 (406)
Q Consensus 200 g~~ILT~g~S~tV~~~L~~A~-~~~~~f~ViV~EsrP~~eG~~~a~~L~~~GI~vt~I~Dsav~~~m~-----~vd~Vll 273 (406)
+.+||+.|.++.+=..|.... ++| ..+|+++...+.... ...+....+..-+-....+..++. ++|.||-
T Consensus 46 ~~~vlVtGatG~iG~~l~~~L~~~g-~~~V~~~~r~~~~~~---~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~d~Vih 121 (357)
T 2x6t_A 46 GRMIIVTGGAGFIGSNIVKALNDKG-ITDILVVDNLKDGTK---FVNLVDLNIADYMDKEDFLIQIMAGEEFGDVEAIFH 121 (357)
T ss_dssp --CEEEETTTSHHHHHHHHHHHHTT-CCCEEEEECCSSGGG---GGGTTTSCCSEEEEHHHHHHHHHTTCCCSSCCEEEE
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCC-CcEEEEEecCCCcch---hhcccCceEeeecCcHHHHHHHHhhcccCCCCEEEE
Confidence 457888888887766665443 333 256777755443211 111221123333333344555665 4777776
Q ss_pred cceeEeeC-CC-----cccccchHHHHHHHhhCCCceEEecC
Q 045642 274 GVHAVMAN-GG-----VIAPAGLHVLALAAKKHDVPFVVVAS 309 (406)
Q Consensus 274 GAdav~~n-G~-----vvnk~GT~~lAl~Ak~~~vPv~V~ae 309 (406)
-|-..... .. -+|-.||..++-+|+..++.|+.++.
T Consensus 122 ~A~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~r~V~~SS 163 (357)
T 2x6t_A 122 EGACSSTTEWDGKYMMDNNYQYSKELLHYCLEREIPFLYASS 163 (357)
T ss_dssp CCSCCCTTCCCHHHHHHHTHHHHHHHHHHHHHHTCCEEEEEE
T ss_pred CCcccCCccCCHHHHHHHHHHHHHHHHHHHHHcCCeEEEEcc
Confidence 55321110 00 13667899999999888885555543
No 406
>3hvy_A Cystathionine beta-lyase family protein, YNBB B.S ortholog; NP_348457.1, putative cystathionine beta-lyase involved in A resistance; HET: LLP MSE; 2.00A {Clostridium acetobutylicum}
Probab=33.82 E-value=1.1e+02 Score=30.08 Aligned_cols=103 Identities=8% Similarity=0.063 Sum_probs=57.0
Q ss_pred cccCcEEE---eccChHHHHHHHHHHHHcCCceEEEEecCCCCcchH-HHH--------HHHHhCCCceEEEcc------
Q 045642 197 IHQNEVIL---TLGHSKFVKEFLCAAKEKKRSFEVFIADGAPKFEGH-ILA--------KELDKKGLKAIVITD------ 258 (406)
Q Consensus 197 I~~g~~IL---T~g~S~tV~~~L~~A~~~~~~f~ViV~EsrP~~eG~-~~a--------~~L~~~GI~vt~I~D------ 258 (406)
+.....++ |.|.+..+..+|....+ ..-+|++.+ .|.+.|. .+. ..+...|+.+..++-
T Consensus 87 ~g~e~alv~p~~~sGt~A~~~al~all~--pGD~Vl~~~-~~~y~~~~~~~g~~~~~~~~~l~~~G~~~~~v~~~~~~~d 163 (427)
T 3hvy_A 87 FNTESAFVRPHFVNGTHAIGAALFGNLR--PNDTMMSIC-GMPYDTLHDIIGMDDSKKVGSLREYGVKYKMVDLKDGKVD 163 (427)
T ss_dssp HTCSEEEEETTCCSHHHHHHHHHHHTCC--TTCEEEECS-SSCCGGGHHHHTCCTTCCSCCTGGGTCEEEECCCBTTBCC
T ss_pred hCCCceEEeCCCCcHHHHHHHHHHHhcC--CCCEEEEeC-CCCchhHHHHhccccchhhhHHHHcCCEEEEecCCCCCcC
Confidence 33334455 55656555555554442 334566655 4555553 333 456678998887753
Q ss_pred -hHHHHHhh---cCCEEEEcceeEeeCCCcccccch----HHHHHHHhh--CCCceEE
Q 045642 259 -SAVFAMIS---RVNMVIVGVHAVMANGGVIAPAGL----HVLALAAKK--HDVPFVV 306 (406)
Q Consensus 259 -sav~~~m~---~vd~VllGAdav~~nG~vvnk~GT----~~lAl~Ak~--~~vPv~V 306 (406)
.++...+. +...|++.... |..-|..|+ ..++-+|++ ++++++|
T Consensus 164 ~e~l~~~i~~~~~tklV~i~~s~----gyp~nptg~v~dl~~i~~ia~~~~~g~~liv 217 (427)
T 3hvy_A 164 INTVKEELKKDDSIKLIHIQRST----GYGWRKSLRIAEIAEIIKSIREVNENVIVFV 217 (427)
T ss_dssp HHHHHHHHHHCTTEEEEEEESSC----CSSSSCCCCHHHHHHHHHHHHHHCSSSEEEE
T ss_pred HHHHHHHhhCCCCCEEEEEECCC----CCCCCccccHHHHHHHHHHHHHhCCCCEEEE
Confidence 34444454 44444444321 225566665 356677888 8998887
No 407
>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2
Probab=33.66 E-value=2.4e+02 Score=25.09 Aligned_cols=108 Identities=13% Similarity=0.133 Sum_probs=60.1
Q ss_pred cCcEEEeccChHHHHHHHHHH-HHcCCceEEEEecCCCCcchHHHHHHHHhCCCceEEE-cc----hHHHHHhh------
Q 045642 199 QNEVILTLGHSKFVKEFLCAA-KEKKRSFEVFIADGAPKFEGHILAKELDKKGLKAIVI-TD----SAVFAMIS------ 266 (406)
Q Consensus 199 ~g~~ILT~g~S~tV~~~L~~A-~~~~~~f~ViV~EsrP~~eG~~~a~~L~~~GI~vt~I-~D----sav~~~m~------ 266 (406)
.+.+||+.|.|+.+=..+... .++| .+|+++.-++ .....++++|.+.|-++.++ .| .++..++.
T Consensus 30 ~~k~vlITGasggIG~~la~~L~~~G--~~V~~~~r~~-~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 106 (272)
T 1yb1_A 30 TGEIVLITGAGHGIGRLTAYEFAKLK--SKLVLWDINK-HGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAEI 106 (272)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTT--CEEEEEESCH-HHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCC--CEEEEEEcCH-HHHHHHHHHHHhcCCeEEEEEeeCCCHHHHHHHHHHHHHHC
Confidence 467788888887776655444 3334 6788776543 22345677777777666654 34 23444443
Q ss_pred -cCCEEEEcceeEeeCCCc-------------ccccchHHHHHHHh----hCCCceEEecCC
Q 045642 267 -RVNMVIVGVHAVMANGGV-------------IAPAGLHVLALAAK----KHDVPFVVVAST 310 (406)
Q Consensus 267 -~vd~VllGAdav~~nG~v-------------vnk~GT~~lAl~Ak----~~~vPv~V~aes 310 (406)
++|.||--|- +...+.+ +|-.|+..++..+. ..+...+|...+
T Consensus 107 g~iD~li~~Ag-~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS 167 (272)
T 1yb1_A 107 GDVSILVNNAG-VVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHGHIVTVAS 167 (272)
T ss_dssp CCCSEEEECCC-CCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred CCCcEEEECCC-cCCCcchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEec
Confidence 5787776653 2222221 34567666655442 345555554433
No 408
>3sho_A Transcriptional regulator, RPIR family; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.80A {Sphaerobacter thermophilus}
Probab=33.64 E-value=2.1e+02 Score=23.89 Aligned_cols=77 Identities=13% Similarity=0.154 Sum_probs=50.3
Q ss_pred EEEEecCCCC-cchHHHHHHHHhCCCceEEEc-chHHH-HHhh---cCCEEEEcceeEeeCCCcccccchHHHHHHHhhC
Q 045642 227 EVFIADGAPK-FEGHILAKELDKKGLKAIVIT-DSAVF-AMIS---RVNMVIVGVHAVMANGGVIAPAGLHVLALAAKKH 300 (406)
Q Consensus 227 ~ViV~EsrP~-~eG~~~a~~L~~~GI~vt~I~-Dsav~-~~m~---~vd~VllGAdav~~nG~vvnk~GT~~lAl~Ak~~ 300 (406)
+|++.-.+.. .-+..++..|...|++|..+. |.... ..+. .=|.||+- ...|. ..-+..++-.||..
T Consensus 41 ~I~i~G~G~S~~~a~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~d~~i~i----S~sG~---t~~~~~~~~~ak~~ 113 (187)
T 3sho_A 41 HVIVVGMGFSAAVAVFLGHGLNSLGIRTTVLTEGGSTLTITLANLRPTDLMIGV----SVWRY---LRDTVAALAGAAER 113 (187)
T ss_dssp EEEEECCGGGHHHHHHHHHHHHHTTCCEEEECCCTHHHHHHHHTCCTTEEEEEE----CCSSC---CHHHHHHHHHHHHT
T ss_pred EEEEEecCchHHHHHHHHHHHHhcCCCEEEecCCchhHHHHHhcCCCCCEEEEE----eCCCC---CHHHHHHHHHHHHC
Confidence 6777755432 334678888999999999998 54332 2232 33444432 22332 23467778899999
Q ss_pred CCceEEecCC
Q 045642 301 DVPFVVVAST 310 (406)
Q Consensus 301 ~vPv~V~aes 310 (406)
|+|+++++..
T Consensus 114 g~~vi~IT~~ 123 (187)
T 3sho_A 114 GVPTMALTDS 123 (187)
T ss_dssp TCCEEEEESC
T ss_pred CCCEEEEeCC
Confidence 9999999864
No 409
>3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0
Probab=33.58 E-value=51 Score=30.15 Aligned_cols=102 Identities=14% Similarity=0.115 Sum_probs=55.2
Q ss_pred EEEeccChHHHHHHHHHHHHcCCceEEEEecCCCCcchHHHHHHHHhCCCceEE--EcchHHHHHhhcCCEEEEcceeEe
Q 045642 202 VILTLGHSKFVKEFLCAAKEKKRSFEVFIADGAPKFEGHILAKELDKKGLKAIV--ITDSAVFAMISRVNMVIVGVHAVM 279 (406)
Q Consensus 202 ~ILT~g~S~tV~~~L~~A~~~~~~f~ViV~EsrP~~eG~~~a~~L~~~GI~vt~--I~Dsav~~~m~~vd~VllGAdav~ 279 (406)
+||+.|.++.+=..|.....+ +. .|+++..+....... ...++.... +.|..+..++.++|.|+--|-...
T Consensus 3 ~vlVTGatG~iG~~l~~~L~~-~g-~~v~~~~~~~~~~~~-----~~~~~~~~~~Dl~~~~~~~~~~~~d~vih~a~~~~ 75 (313)
T 3ehe_A 3 LIVVTGGAGFIGSHVVDKLSE-SN-EIVVIDNLSSGNEEF-----VNEAARLVKADLAADDIKDYLKGAEEVWHIAANPD 75 (313)
T ss_dssp CEEEETTTSHHHHHHHHHHTT-TS-CEEEECCCSSCCGGG-----SCTTEEEECCCTTTSCCHHHHTTCSEEEECCCCCC
T ss_pred EEEEECCCchHHHHHHHHHHh-CC-CEEEEEcCCCCChhh-----cCCCcEEEECcCChHHHHHHhcCCCEEEECCCCCC
Confidence 577888888777766555422 22 444444433221110 012221111 123456667778888886553211
Q ss_pred eCCC--------cccccchHHHHHHHhhCCCceEEecCC
Q 045642 280 ANGG--------VIAPAGLHVLALAAKKHDVPFVVVAST 310 (406)
Q Consensus 280 ~nG~--------vvnk~GT~~lAl~Ak~~~vPv~V~aes 310 (406)
.+.. -+|-.||..++-+|+..+++-+|...+
T Consensus 76 ~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~iv~~SS 114 (313)
T 3ehe_A 76 VRIGAENPDEIYRNNVLATYRLLEAMRKAGVSRIVFTST 114 (313)
T ss_dssp CC-CCCCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEECC
T ss_pred hhhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeCc
Confidence 1111 136679999999999988865555544
No 410
>3cis_A Uncharacterized protein; alpha/beta hydrolase, ATP, universal stress protein, unknown function; HET: ATP; 2.90A {Mycobacterium tuberculosis} PDB: 2jax_A*
Probab=33.39 E-value=2.7e+02 Score=25.16 Aligned_cols=56 Identities=18% Similarity=0.284 Sum_probs=34.9
Q ss_pred CCCceEEE--cch---HHHHHhhcCCEEEEcceeEeeCCCccc-ccchHHHHHHHhhCCCceEEec
Q 045642 249 KGLKAIVI--TDS---AVFAMISRVNMVIVGVHAVMANGGVIA-PAGLHVLALAAKKHDVPFVVVA 308 (406)
Q Consensus 249 ~GI~vt~I--~Ds---av~~~m~~vd~VllGAdav~~nG~vvn-k~GT~~lAl~Ak~~~vPv~V~a 308 (406)
.|++++.. ... ++..+..++|.+++|+.. .|++-. -.|+..-.++ ++..+||+|+=
T Consensus 244 ~~~~~~~~~~~g~~~~~I~~~a~~adliV~G~~~---~~~~~~~l~Gsv~~~vl-~~~~~pVlvv~ 305 (309)
T 3cis_A 244 PNVAITRVVVRDQPARQLVQRSEEAQLVVVGSRG---RGGYAGMLVGSVGETVA-QLARTPVIVAR 305 (309)
T ss_dssp TTSCEEEEEESSCHHHHHHHHHTTCSEEEEESSC---SSCCTTCSSCHHHHHHH-HHCSSCEEEEC
T ss_pred CCCcEEEEEEcCCHHHHHHHhhCCCCEEEECCCC---CCCccccccCcHHHHHH-hcCCCCEEEeC
Confidence 47776642 222 334444589999999975 333333 3576555554 66789999974
No 411
>3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A*
Probab=33.35 E-value=1e+02 Score=28.88 Aligned_cols=20 Identities=15% Similarity=0.079 Sum_probs=15.3
Q ss_pred HHHHHHHhhCCCceEEecCC
Q 045642 291 HVLALAAKKHDVPFVVVAST 310 (406)
Q Consensus 291 ~~lAl~Ak~~~vPv~V~aes 310 (406)
+..+++|+..++|++...-.
T Consensus 125 ~~~~~aa~~~giP~v~~~~~ 144 (391)
T 3tsa_A 125 LIGRVLGGLLDLPVVLHRWG 144 (391)
T ss_dssp HHHHHHHHHTTCCEEEECCS
T ss_pred hHHHHHHHHhCCCEEEEecC
Confidence 44567899999999987543
No 412
>2w8t_A SPT, serine palmitoyltransferase; HET: LLP; 1.25A {Sphingomonas paucimobilis} PDB: 2w8u_A* 2w8w_A* 2xbn_A* 2w8j_A* 2w8v_A* 2jg2_A* 2jgt_A 2x8u_A*
Probab=33.27 E-value=3.2e+02 Score=25.96 Aligned_cols=102 Identities=16% Similarity=0.166 Sum_probs=55.3
Q ss_pred HhcccCcEEEeccChHHHHHHHHHHHHcCCceEEEEecCCCCcchHHHHHHHHhCCCceEEEcc---hHHHHHhhc----
Q 045642 195 ELIHQNEVILTLGHSKFVKEFLCAAKEKKRSFEVFIADGAPKFEGHILAKELDKKGLKAIVITD---SAVFAMISR---- 267 (406)
Q Consensus 195 ~~I~~g~~ILT~g~S~tV~~~L~~A~~~~~~f~ViV~EsrP~~eG~~~a~~L~~~GI~vt~I~D---sav~~~m~~---- 267 (406)
+++.-.+.|++.+.+..+..++.... ++.-.|++. .|.+.+.. ..+...|.++..++- ..+-..+.+
T Consensus 120 ~~~g~~~~i~~~sGs~a~~~al~~l~--~~gd~vl~~--~~~h~~~~--~~~~~~g~~~~~~~~~d~~~le~~l~~~~~~ 193 (427)
T 2w8t_A 120 DFYGTTGAIVFSTGYMANLGIISTLA--GKGEYVILD--ADSHASIY--DGCQQGNAEIVRFRHNSVEDLDKRLGRLPKE 193 (427)
T ss_dssp HHHTCSEEEEESCHHHHHHHHHHHHS--CTTCEEEEE--TTCCHHHH--HHHHHSCSEEEEECTTCHHHHHHHHHTSCSS
T ss_pred HHhCCCceEEecCcHHHHHHHHHHhc--CCCCEEEEC--CcccHHHH--HHHHHcCCeeEEeCCCCHHHHHHHHHhccCC
Confidence 33433356666666666665555543 333455553 45554432 234456888777752 233344443
Q ss_pred -CCEEEEcceeEeeCCCcccccchHHHHHHHhhCCCceEE
Q 045642 268 -VNMVIVGVHAVMANGGVIAPAGLHVLALAAKKHDVPFVV 306 (406)
Q Consensus 268 -vd~VllGAdav~~nG~vvnk~GT~~lAl~Ak~~~vPv~V 306 (406)
+..|++ +.+...+|.+.. -..++-+|+++++++++
T Consensus 194 ~~~~v~~--~~~~n~tG~~~~--l~~l~~l~~~~g~~li~ 229 (427)
T 2w8t_A 194 PAKLVVL--EGVYSMLGDIAP--LKEMVAVAKKHGAMVLV 229 (427)
T ss_dssp SCEEEEE--ESEETTTTEECC--HHHHHHHHHHTTCEEEE
T ss_pred CCeEEEE--cCCCCCCCCccC--HHHHHHHHHHcCCEEEE
Confidence 333443 344444444443 45677889999998876
No 413
>2o0m_A Transcriptional regulator, SORC family; structural genomics, protein structure initiative, midwest center for structural genomics, MCSG; 1.60A {Enterococcus faecalis} SCOP: c.124.1.8
Probab=33.27 E-value=69 Score=30.60 Aligned_cols=91 Identities=11% Similarity=0.107 Sum_probs=55.9
Q ss_pred HHHHHHHHHHh----ccc-CcEEEeccChHHHHHHHHHHHHc---CCceEEEEecCC----CCcchHHHHHHHHhC-CCc
Q 045642 186 REGIAEQAMEL----IHQ-NEVILTLGHSKFVKEFLCAAKEK---KRSFEVFIADGA----PKFEGHILAKELDKK-GLK 252 (406)
Q Consensus 186 ~~~I~~~a~~~----I~~-g~~ILT~g~S~tV~~~L~~A~~~---~~~f~ViV~Esr----P~~eG~~~a~~L~~~-GI~ 252 (406)
.+.|++.|+++ |.+ +++|. +++++|+..+.+..... .++.+|+-+... |......+++.|++. |++
T Consensus 124 k~~ia~~AA~~l~~~i~~~~~~ig-l~~GsT~~~~~~~L~~~~~~~~~v~vv~l~ggl~~~~~~~~~~i~~~la~~~~~~ 202 (345)
T 2o0m_A 124 LSDFGDVLTNTLNLLLPNGENTIA-VMGGTTMAMVAENMGSLETEKRHNLFVPARGGIGEAVSVQANSISAVMANKTGGN 202 (345)
T ss_dssp HHHHHHHHHHHHHHHCCSEEEEEE-ECCSHHHHHHHHTCCCCCCSSEEEEEEESBSCCCCCGGGSHHHHHHHHHHHHTCE
T ss_pred HHHHHHHHHHHHHHhcCcCCCEEE-ECCcHHHHHHHHHhhhccCCCCCcEEEEcCCcCCCCcccCHHHHHHHHHHHhCCc
Confidence 35677777775 888 66554 68888988888777532 245666655432 222335778888875 776
Q ss_pred eEE--Ecch---HH-HHHh------------hcCCEEEEccee
Q 045642 253 AIV--ITDS---AV-FAMI------------SRVNMVIVGVHA 277 (406)
Q Consensus 253 vt~--I~Ds---av-~~~m------------~~vd~VllGAda 277 (406)
+.. +|+. .. -.++ .++|+.|+|.-.
T Consensus 203 ~~~l~~P~~~~~~~~~~l~~~~~~~~~l~~~~~~DiailGIG~ 245 (345)
T 2o0m_A 203 YRALYVPEQLSRETYNSLLQEPSIQEVLTLISHANCVVHSIGR 245 (345)
T ss_dssp ECCCCCCSSCCHHHHHHHHTCHHHHHHHHHHHTCSEEEECCEE
T ss_pred eEEEeccccCCHHHHHHHHhChHHHHHHHHHHcCCEEEEccCC
Confidence 653 3321 11 1122 369999999864
No 414
>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens}
Probab=33.05 E-value=45 Score=29.89 Aligned_cols=98 Identities=18% Similarity=0.085 Sum_probs=59.8
Q ss_pred cEEEeccChHHHHHHHHHHHHcCCceEEEEecCCCCcchHHHHHHHHhCCCceEEE-cc----hHHHHHhhcCCEEEEcc
Q 045642 201 EVILTLGHSKFVKEFLCAAKEKKRSFEVFIADGAPKFEGHILAKELDKKGLKAIVI-TD----SAVFAMISRVNMVIVGV 275 (406)
Q Consensus 201 ~~ILT~g~S~tV~~~L~~A~~~~~~f~ViV~EsrP~~eG~~~a~~L~~~GI~vt~I-~D----sav~~~m~~vd~VllGA 275 (406)
.+||..|.++.+=..|..... .+..+|+++.-.|...- ..++ .++ .| ..+..++.++|.||--|
T Consensus 3 ~~ilVtGatG~iG~~l~~~L~-~~g~~V~~~~r~~~~~~--------~~~~--~~~~~Dl~d~~~~~~~~~~~d~vi~~a 71 (267)
T 3ay3_A 3 NRLLVTGAAGGVGSAIRPHLG-TLAHEVRLSDIVDLGAA--------EAHE--EIVACDLADAQAVHDLVKDCDGIIHLG 71 (267)
T ss_dssp EEEEEESTTSHHHHHHGGGGG-GTEEEEEECCSSCCCCC--------CTTE--EECCCCTTCHHHHHHHHTTCSEEEECC
T ss_pred ceEEEECCCCHHHHHHHHHHH-hCCCEEEEEeCCCcccc--------CCCc--cEEEccCCCHHHHHHHHcCCCEEEECC
Confidence 368888888877766655442 23578998876654210 1232 222 22 35666777788887655
Q ss_pred eeEeeCCCc-----ccccchHHHHHHHhhCCCceEEecCC
Q 045642 276 HAVMANGGV-----IAPAGLHVLALAAKKHDVPFVVVAST 310 (406)
Q Consensus 276 dav~~nG~v-----vnk~GT~~lAl~Ak~~~vPv~V~aes 310 (406)
-.. ..... +|-.|+..+.-+|+..+++-+|...+
T Consensus 72 ~~~-~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS 110 (267)
T 3ay3_A 72 GVS-VERPWNDILQANIIGAYNLYEAARNLGKPRIVFASS 110 (267)
T ss_dssp SCC-SCCCHHHHHHHTHHHHHHHHHHHHHTTCCEEEEEEE
T ss_pred cCC-CCCCHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeCC
Confidence 322 11111 56789999999999888865555444
No 415
>3p9x_A Phosphoribosylglycinamide formyltransferase; structural genomics, PSI-biology, protein STRU initiative; 1.90A {Bacillus halodurans}
Probab=32.79 E-value=1e+02 Score=27.57 Aligned_cols=70 Identities=11% Similarity=0.172 Sum_probs=38.7
Q ss_pred EEEeccChHHHHHHHHHHHHcCC-ceEEEE-ecCCCCcchHHHHHHHHhCCCceEEEcc----------hHHHHHhh--c
Q 045642 202 VILTLGHSKFVKEFLCAAKEKKR-SFEVFI-ADGAPKFEGHILAKELDKKGLKAIVITD----------SAVFAMIS--R 267 (406)
Q Consensus 202 ~ILT~g~S~tV~~~L~~A~~~~~-~f~ViV-~EsrP~~eG~~~a~~L~~~GI~vt~I~D----------sav~~~m~--~ 267 (406)
.||.-|..+..++++.... .|. +.+|.. +-.+|...+...| .+.||++.++.. ..+...++ +
T Consensus 6 avl~Sg~Gsnl~ali~~~~-~~~l~~eI~~Visn~~~a~v~~~A---~~~gIp~~~~~~~~~~~r~~~d~~~~~~l~~~~ 81 (211)
T 3p9x_A 6 AIFASGSGTNAEAIIQSQK-AGQLPCEVALLITDKPGAKVVERV---KVHEIPVCALDPKTYPSKEAYEIEVVQQLKEKQ 81 (211)
T ss_dssp EEECCTTCHHHHHHHHHHH-TTCCSSEEEEEEESCSSSHHHHHH---HTTTCCEEECCGGGSSSHHHHHHHHHHHHHHTT
T ss_pred EEEEeCCchHHHHHHHHHH-cCCCCcEEEEEEECCCCcHHHHHH---HHcCCCEEEeChhhcCchhhhHHHHHHHHHhcC
Confidence 3565566666666665554 442 344443 3345665443333 457999988753 34444454 4
Q ss_pred CCEEEEcc
Q 045642 268 VNMVIVGV 275 (406)
Q Consensus 268 vd~VllGA 275 (406)
+|.+++.+
T Consensus 82 ~Dliv~ag 89 (211)
T 3p9x_A 82 IDFVVLAG 89 (211)
T ss_dssp CCEEEESS
T ss_pred CCEEEEeC
Confidence 77777654
No 416
>2qxy_A Response regulator; regulation of transcription, NYSGXRC, protein structure initiative II (PSI II), structural genomics; 1.95A {Thermotoga maritima}
Probab=32.74 E-value=1.5e+02 Score=22.90 Aligned_cols=77 Identities=16% Similarity=0.279 Sum_probs=42.4
Q ss_pred ceEEEEecCCCCcchHHHHHHHHhCCCceEEEcchHHH-HHhh--cCCEEEEcceeEeeCCCcccccchHHHHHHHhh-C
Q 045642 225 SFEVFIADGAPKFEGHILAKELDKKGLKAIVITDSAVF-AMIS--RVNMVIVGVHAVMANGGVIAPAGLHVLALAAKK-H 300 (406)
Q Consensus 225 ~f~ViV~EsrP~~eG~~~a~~L~~~GI~vt~I~Dsav~-~~m~--~vd~VllGAdav~~nG~vvnk~GT~~lAl~Ak~-~ 300 (406)
..+|.++|..|.. ...+...|.+.|+.|....+..-+ ..+. ..|.||+.. +.+ ..|.-.+..+-+. .
T Consensus 4 ~~~iLivdd~~~~-~~~l~~~L~~~g~~v~~~~~~~~a~~~l~~~~~dlvi~d~---~~~-----~~g~~~~~~l~~~~~ 74 (142)
T 2qxy_A 4 TPTVMVVDESRIT-FLAVKNALEKDGFNVIWAKNEQEAFTFLRREKIDLVFVDV---FEG-----EESLNLIRRIREEFP 74 (142)
T ss_dssp CCEEEEECSCHHH-HHHHHHHHGGGTCEEEEESSHHHHHHHHTTSCCSEEEEEC---TTT-----HHHHHHHHHHHHHCT
T ss_pred CCeEEEEeCCHHH-HHHHHHHHHhCCCEEEEECCHHHHHHHHhccCCCEEEEeC---CCC-----CcHHHHHHHHHHHCC
Confidence 3567777766532 234556667778877766554322 2222 367777764 221 2233333333333 4
Q ss_pred CCceEEecCC
Q 045642 301 DVPFVVVAST 310 (406)
Q Consensus 301 ~vPv~V~aes 310 (406)
++|+++++..
T Consensus 75 ~~pii~ls~~ 84 (142)
T 2qxy_A 75 DTKVAVLSAY 84 (142)
T ss_dssp TCEEEEEESC
T ss_pred CCCEEEEECC
Confidence 6999998765
No 417
>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}
Probab=32.67 E-value=2.5e+02 Score=25.50 Aligned_cols=102 Identities=14% Similarity=0.099 Sum_probs=61.0
Q ss_pred cCcEEEeccChHHHHHHHHHHHHcCCceEEEEecCCCCcch-HHHHHHHHhCCCceEEEc-c----hHHHHHh-------
Q 045642 199 QNEVILTLGHSKFVKEFLCAAKEKKRSFEVFIADGAPKFEG-HILAKELDKKGLKAIVIT-D----SAVFAMI------- 265 (406)
Q Consensus 199 ~g~~ILT~g~S~tV~~~L~~A~~~~~~f~ViV~EsrP~~eG-~~~a~~L~~~GI~vt~I~-D----sav~~~m------- 265 (406)
.|.++|+.|.++-+=..+..... ....+|+++..++..+. ..++..+.+.|..+.++. | ..+..++
T Consensus 48 ~~k~vlVTGas~GIG~aia~~la-~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 126 (294)
T 3r3s_A 48 KDRKALVTGGDSGIGRAAAIAYA-REGADVAINYLPAEEEDAQQVKALIEECGRKAVLLPGDLSDESFARSLVHKAREAL 126 (294)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHH-HTTCEEEEECCGGGHHHHHHHHHHHHHTTCCEEECCCCTTSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHH-HCCCEEEEEeCCcchhHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHHc
Confidence 46788888888877666654431 23467887765533232 456667777787777652 3 2333333
Q ss_pred hcCCEEEEcceeEeeCCC-------------cccccchHHHHHHHhhCC
Q 045642 266 SRVNMVIVGVHAVMANGG-------------VIAPAGLHVLALAAKKHD 301 (406)
Q Consensus 266 ~~vd~VllGAdav~~nG~-------------vvnk~GT~~lAl~Ak~~~ 301 (406)
.++|.+|-.|-.....+. -+|-.|++.++.++..+-
T Consensus 127 g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~ 175 (294)
T 3r3s_A 127 GGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLL 175 (294)
T ss_dssp TCCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGC
T ss_pred CCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHh
Confidence 368888877643222222 146778888887776553
No 418
>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*
Probab=32.67 E-value=61 Score=29.01 Aligned_cols=108 Identities=17% Similarity=0.111 Sum_probs=61.5
Q ss_pred cCcEEEeccChHHHHHHHHHH-HHcCCceEEEEecCCCCcchHHHHHHHHhCCCceEEE-cc----hHHHHHh-------
Q 045642 199 QNEVILTLGHSKFVKEFLCAA-KEKKRSFEVFIADGAPKFEGHILAKELDKKGLKAIVI-TD----SAVFAMI------- 265 (406)
Q Consensus 199 ~g~~ILT~g~S~tV~~~L~~A-~~~~~~f~ViV~EsrP~~eG~~~a~~L~~~GI~vt~I-~D----sav~~~m------- 265 (406)
.|.+||+.|.|+.+=..+... .++| .+|+++...+ .....++++|.+.|.++.++ .| ..+..++
T Consensus 8 ~~k~vlVTGas~giG~~ia~~l~~~G--~~V~~~~r~~-~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 84 (260)
T 2ae2_A 8 EGCTALVTGGSRGIGYGIVEELASLG--ASVYTCSRNQ-KELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANHF 84 (260)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHHTT--CEEEEEESCH-HHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCC--CEEEEEeCCH-HHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 467788888887776655443 3344 5788775433 22345677777777666554 33 2333444
Q ss_pred -hcCCEEEEcceeEeeCCCc-------------ccccchHHHHHHH----hhCCCceEEecCC
Q 045642 266 -SRVNMVIVGVHAVMANGGV-------------IAPAGLHVLALAA----KKHDVPFVVVAST 310 (406)
Q Consensus 266 -~~vd~VllGAdav~~nG~v-------------vnk~GT~~lAl~A----k~~~vPv~V~aes 310 (406)
.++|.||--|-. ...+.+ +|-.|+..++.++ +..+..-+|...+
T Consensus 85 ~g~id~lv~~Ag~-~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS 146 (260)
T 2ae2_A 85 HGKLNILVNNAGI-VIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERGNVVFISS 146 (260)
T ss_dssp TTCCCEEEECCCC-CCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTSSEEEEEECC
T ss_pred CCCCCEEEECCCC-CCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcc
Confidence 457777766532 222221 4667888877666 3345455554433
No 419
>3vp6_A Glutamate decarboxylase 1; catalytic loop SWAP, lyase; HET: LLP HLD; 2.10A {Homo sapiens} PDB: 2okj_A* 2okk_A*
Probab=32.58 E-value=3.8e+02 Score=26.57 Aligned_cols=100 Identities=17% Similarity=0.163 Sum_probs=56.4
Q ss_pred CcEEEeccChHHHHHHHHHHHH--------cC----CceEEEEecCCCCcchHHHHHHHHhCCC---ceEEEcc------
Q 045642 200 NEVILTLGHSKFVKEFLCAAKE--------KK----RSFEVFIADGAPKFEGHILAKELDKKGL---KAIVITD------ 258 (406)
Q Consensus 200 g~~ILT~g~S~tV~~~L~~A~~--------~~----~~f~ViV~EsrP~~eG~~~a~~L~~~GI---~vt~I~D------ 258 (406)
...++|-|.+..+...|..+.. .| .+..|++.+.. ... +.+.+...|+ .+..++-
T Consensus 155 ~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~G~~~~~~~~v~~s~~~--H~s--~~~~~~~~g~g~~~~~~v~~d~~~~~ 230 (511)
T 3vp6_A 155 GDGIFSPGGAISNMYSIMAARYKYFPEVKTKGMAAVPKLVLFTSEQS--HYS--IKKAGAALGFGTDNVILIKCNERGKI 230 (511)
T ss_dssp CEEEEESSHHHHHHHHHHHHHHHHCTHHHHHCGGGSCCEEEEEETTS--CTH--HHHHHHHTTSCGGGEEEECBCTTSCB
T ss_pred CceEECCchHHHHHHHHHHHHHHhhhhhhhcCcccCCCeEEEECCCc--hHH--HHHHHHHcCCCCCcEEEeecCCCCcc
Confidence 4678888877777766666643 23 34566666432 222 2334444565 7887752
Q ss_pred --hHHHHHhhcC------CEEEEcceeEeeCCCcccccchHHHHHHHhhCCCceEE
Q 045642 259 --SAVFAMISRV------NMVIVGVHAVMANGGVIAPAGLHVLALAAKKHDVPFVV 306 (406)
Q Consensus 259 --sav~~~m~~v------d~VllGAdav~~nG~vvnk~GT~~lAl~Ak~~~vPv~V 306 (406)
.++-..+.+. .++|+....-...|. +..+ -.|+-+|++|+++++|
T Consensus 231 d~~~Le~~i~~~~~~g~~~~~vv~~~~~~~~G~-vd~l--~~I~~ia~~~~~~lhv 283 (511)
T 3vp6_A 231 IPADFEAKILEAKQKGYVPFYVNATAGTTVYGA-FDPI--QEIADICEKYNLWLHV 283 (511)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEEEEBSCSSSCC-BCCH--HHHHHHHHHHTCEEEE
T ss_pred CHHHHHHHHHHHHhcCCCcEEEEEecCCCCCcc-cccH--HHHHHHHHHcCCEEEE
Confidence 2344444332 444544433333443 3443 5577889999999887
No 420
>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2
Probab=32.53 E-value=82 Score=28.63 Aligned_cols=109 Identities=12% Similarity=0.132 Sum_probs=61.3
Q ss_pred cCcEEEeccChHHHHHHHHHHHHcCCceEEEEecCCCCcchHHHHHHHHhCCCceEEE-cc----hHHHHHh-------h
Q 045642 199 QNEVILTLGHSKFVKEFLCAAKEKKRSFEVFIADGAPKFEGHILAKELDKKGLKAIVI-TD----SAVFAMI-------S 266 (406)
Q Consensus 199 ~g~~ILT~g~S~tV~~~L~~A~~~~~~f~ViV~EsrP~~eG~~~a~~L~~~GI~vt~I-~D----sav~~~m-------~ 266 (406)
.+.+||..|.|+.+=..+.... ..+..+|+++...+ .....++++|.+.|.++.++ .| .++..++ .
T Consensus 43 ~~k~vlITGasggIG~~la~~L-~~~G~~V~~~~r~~-~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~ 120 (285)
T 2c07_A 43 ENKVALVTGAGRGIGREIAKML-AKSVSHVICISRTQ-KSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKILTEHK 120 (285)
T ss_dssp SSCEEEEESTTSHHHHHHHHHH-TTTSSEEEEEESSH-HHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHCS
T ss_pred CCCEEEEECCCcHHHHHHHHHH-HHcCCEEEEEcCCH-HHHHHHHHHHHhcCCceeEEECCCCCHHHHHHHHHHHHHhcC
Confidence 4568888888887777666555 23456788754332 22345667777777776654 34 2344444 2
Q ss_pred cCCEEEEcceeEeeCCCc-------------ccccchHHHHHHHh----hCCCceEEecCC
Q 045642 267 RVNMVIVGVHAVMANGGV-------------IAPAGLHVLALAAK----KHDVPFVVVAST 310 (406)
Q Consensus 267 ~vd~VllGAdav~~nG~v-------------vnk~GT~~lAl~Ak----~~~vPv~V~aes 310 (406)
++|.||--|- +...+.+ +|-.|+..++.++. ..+.+.+|...+
T Consensus 121 ~id~li~~Ag-~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS 180 (285)
T 2c07_A 121 NVDILVNNAG-ITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNRYGRIINISS 180 (285)
T ss_dssp CCCEEEECCC-CCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCEEEEEECC
T ss_pred CCCEEEECCC-CCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECC
Confidence 5777776553 2222211 45677776665543 234455554433
No 421
>3nhm_A Response regulator; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.19A {Myxococcus xanthus}
Probab=32.49 E-value=1.6e+02 Score=22.29 Aligned_cols=55 Identities=15% Similarity=0.127 Sum_probs=35.7
Q ss_pred cCcEEEeccChHHHHHHHHHHHHcCCceEEEEecCC-CCcchHHHHHHHHhC----CCceEEEcc
Q 045642 199 QNEVILTLGHSKFVKEFLCAAKEKKRSFEVFIADGA-PKFEGHILAKELDKK----GLKAIVITD 258 (406)
Q Consensus 199 ~g~~ILT~g~S~tV~~~L~~A~~~~~~f~ViV~Esr-P~~eG~~~a~~L~~~----GI~vt~I~D 258 (406)
.|-.|.+......... .+.+ ..+.+++++-. |...|..+++.|++. ++++.+++.
T Consensus 26 ~~~~v~~~~~~~~a~~---~l~~--~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~~pii~~s~ 85 (133)
T 3nhm_A 26 GEFDCTTAADGASGLQ---QALA--HPPDVLISDVNMDGMDGYALCGHFRSEPTLKHIPVIFVSG 85 (133)
T ss_dssp TTSEEEEESSHHHHHH---HHHH--SCCSEEEECSSCSSSCHHHHHHHHHHSTTTTTCCEEEEES
T ss_pred CCcEEEEECCHHHHHH---HHhc--CCCCEEEEeCCCCCCCHHHHHHHHHhCCccCCCCEEEEeC
Confidence 3445666555444433 3332 34788888754 778899999999985 567777665
No 422
>3fq8_A Glutamate-1-semialdehyde 2,1-aminomutase; drug resistance, microev0lution, integrated approach, chlorophyll biosynthesis; HET: PMP; 2.00A {Synechococcus elongatus pcc 6301} SCOP: c.67.1.4 PDB: 2hp1_A* 2hoz_A* 2hoy_A* 2hp2_A* 3fq7_A* 3usf_A* 2gsa_A* 3gsb_A* 4gsa_A* 3fqa_A* 2cfb_A*
Probab=32.46 E-value=41 Score=32.45 Aligned_cols=141 Identities=18% Similarity=0.196 Sum_probs=70.0
Q ss_pred HHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHhc-ccCcEEEeccChHHHHHHHHHHHH-cCCceEEEEecC-CCCc-c
Q 045642 165 KKLKSELIKAVNELIE--DINTCREGIAEQAMELI-HQNEVILTLGHSKFVKEFLCAAKE-KKRSFEVFIADG-APKF-E 238 (406)
Q Consensus 165 ~~~k~~l~~~i~~~~~--e~~~~~~~I~~~a~~~I-~~g~~ILT~g~S~tV~~~L~~A~~-~~~~f~ViV~Es-rP~~-e 238 (406)
+++++.+.+.++.... ........+++.-+++. ....+++|.|.+..+..+++.|.. .++ -+|++.+. .+.. .
T Consensus 71 p~v~~a~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~~v~~~~ggsea~~~al~~a~~~~~~-~~vi~~~~~yhg~~~ 149 (427)
T 3fq8_A 71 PEVIEALKVAMEKGTSFGAPCALENVLAEMVNDAVPSIEMVRFVNSGTEACMAVLRIMRAYTGR-DKIIKFEGCYHGHAD 149 (427)
T ss_dssp HHHHHHHHHHHTTCSCCSSCCHHHHHHHHHHHHHSTTCSEEEEESSHHHHHHHHHHHHHHHHCC-CEEEEEETCCCCSCG
T ss_pred HHHHHHHHHHHHhCCCcCCCCHHHHHHHHHHHHhCCCCCEEEEeCCHHHHHHHHHHHHHHhhCC-CEEEEECCCcCCCCH
Confidence 5556666665544211 01112233344334444 334678888888888888876643 233 35666543 2221 1
Q ss_pred --------hHHHHHHHHhCCC------ceEEEc--c-hHHHHHhhcC--CEEEEcceeEeeCCCcccc-cc-hHHHHHHH
Q 045642 239 --------GHILAKELDKKGL------KAIVIT--D-SAVFAMISRV--NMVIVGVHAVMANGGVIAP-AG-LHVLALAA 297 (406)
Q Consensus 239 --------G~~~a~~L~~~GI------~vt~I~--D-sav~~~m~~v--d~VllGAdav~~nG~vvnk-~G-T~~lAl~A 297 (406)
|......-...|+ ++..++ | ..+-..+.+. +..++=.+.+..+||.+.. -+ -..++-+|
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~ 229 (427)
T 3fq8_A 150 MFLVKAGSGVATLGLPSSPGVPKKTTANTLTTPYNDLEAVKALFAENPGEIAGVILEPIVGNSGFIVPDAGFLEGLREIT 229 (427)
T ss_dssp GGCSSCCTHHHHHTCCSCSSSCHHHHTTEEEEETTCHHHHHHHHHHSTTTEEEEEECSSBCTTSCBCCCTTHHHHHHHHH
T ss_pred HHHHhcCCcccccCCCCCCCCCCcccCceeecCCCCHHHHHHHHHhCCCCEEEEEEcCCcCCCCCcCCCHHHHHHHHHHH
Confidence 1110000001222 133332 3 2344445432 3444444566777766654 44 35677889
Q ss_pred hhCCCceEE
Q 045642 298 KKHDVPFVV 306 (406)
Q Consensus 298 k~~~vPv~V 306 (406)
++|++++++
T Consensus 230 ~~~~~~li~ 238 (427)
T 3fq8_A 230 LEHDALLVF 238 (427)
T ss_dssp HHTTCEEEE
T ss_pred HHcCCEEEE
Confidence 999998775
No 423
>1u2p_A Ptpase, low molecular weight protein-tyrosine- phosphatase; hydrolase; 1.90A {Mycobacterium tuberculosis} PDB: 1u2q_A
Probab=32.41 E-value=71 Score=27.07 Aligned_cols=68 Identities=12% Similarity=0.092 Sum_probs=47.7
Q ss_pred ccChHHHHHHHHHHHHc-C--CceEEEEecCCCCcch----HHHHHHHHhCCCceEEEcchHH-HHHhhcCCEEEEcc
Q 045642 206 LGHSKFVKEFLCAAKEK-K--RSFEVFIADGAPKFEG----HILAKELDKKGLKAIVITDSAV-FAMISRVNMVIVGV 275 (406)
Q Consensus 206 ~g~S~tV~~~L~~A~~~-~--~~f~ViV~EsrP~~eG----~~~a~~L~~~GI~vt~I~Dsav-~~~m~~vd~VllGA 275 (406)
.++|...+.+|++..++ | .+|+|.=+-+.|...| ....+.|.+.||++. -.-..+ ...+.. |.||.=.
T Consensus 15 ~cRSpmAEal~~~~~~~~gl~~~~~v~SAGt~~~~~G~~~~p~a~~~l~~~Gid~s-~~ar~l~~~~~~~-DlIi~Md 90 (163)
T 1u2p_A 15 ICRSPMAEKMFAQQLRHRGLGDAVRVTSAGTGNWHVGSCADERAAGVLRAHGYPTD-HRAAQVGTEHLAA-DLLVALD 90 (163)
T ss_dssp SSHHHHHHHHHHHHHHHTTCTTTEEEEEEESSCTTTTCCCCHHHHHHHHHTTCCCC-CCCCBCCHHHHTS-SEEEESS
T ss_pred HhHHHHHHHHHHHHHHHCCCCCcEEEEecccCCCcCCCCCCHHHHHHHHHcCcCCC-ceeeECChhhccC-CEEEEeC
Confidence 56899999999987643 2 3588998888886544 477889999999976 322122 344567 8877653
No 424
>2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8
Probab=32.39 E-value=1.8e+02 Score=23.90 Aligned_cols=96 Identities=15% Similarity=0.199 Sum_probs=55.2
Q ss_pred CcEEEeccC---hHHHHHHHHHHHHcCCceEEEEecCCCCcch-HHHHHHHHhCCC--ceE---EEcchHHHHHhhcCCE
Q 045642 200 NEVILTLGH---SKFVKEFLCAAKEKKRSFEVFIADGAPKFEG-HILAKELDKKGL--KAI---VITDSAVFAMISRVNM 270 (406)
Q Consensus 200 g~~ILT~g~---S~tV~~~L~~A~~~~~~f~ViV~EsrP~~eG-~~~a~~L~~~GI--~vt---~I~Dsav~~~m~~vd~ 270 (406)
..+|+..|+ ..-+..++..+.+ -.+++++++-..|..+- +.+++.+ +.|+ .++ .+++..+..++..+|.
T Consensus 23 ~~~i~~~G~~~~~Kg~~~li~a~~~-l~~~~l~i~G~~~~~~~l~~~~~~~-~~~l~~~v~~~g~~~~~e~~~~~~~adi 100 (177)
T 2f9f_A 23 GDFWLSVNRIYPEKRIELQLEVFKK-LQDEKLYIVGWFSKGDHAERYARKI-MKIAPDNVKFLGSVSEEELIDLYSRCKG 100 (177)
T ss_dssp CSCEEEECCSSGGGTHHHHHHHHHH-CTTSCEEEEBCCCTTSTHHHHHHHH-HHHSCTTEEEEESCCHHHHHHHHHHCSE
T ss_pred CCEEEEEeccccccCHHHHHHHHHh-CCCcEEEEEecCccHHHHHHHHHhh-hcccCCcEEEeCCCCHHHHHHHHHhCCE
Confidence 345666664 3455555555543 35677777766665432 3344421 2222 344 3466778999999999
Q ss_pred EEEcceeEeeCCCcccccchHHHHHHHhhCCCceEEe
Q 045642 271 VIVGVHAVMANGGVIAPAGLHVLALAAKKHDVPFVVV 307 (406)
Q Consensus 271 VllGAdav~~nG~vvnk~GT~~lAl~Ak~~~vPv~V~ 307 (406)
+++... ..| .| ...+=|-.+|+||++-
T Consensus 101 ~v~ps~---~e~-----~~--~~~~Eama~G~PvI~~ 127 (177)
T 2f9f_A 101 LLCTAK---DED-----FG--LTPIEAMASGKPVIAV 127 (177)
T ss_dssp EEECCS---SCC-----SC--HHHHHHHHTTCCEEEE
T ss_pred EEeCCC---cCC-----CC--hHHHHHHHcCCcEEEe
Confidence 997543 111 12 2235667789999974
No 425
>3mt0_A Uncharacterized protein PA1789; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 1.58A {Pseudomonas aeruginosa}
Probab=32.36 E-value=2.8e+02 Score=24.87 Aligned_cols=64 Identities=11% Similarity=0.114 Sum_probs=37.2
Q ss_pred HHHHHHhCCCc---eEEEcchHHHHH---hh--cCCEEEEcceeEeeCCCccc-ccchHHHHHHHhhCCCceEEecC
Q 045642 242 LAKELDKKGLK---AIVITDSAVFAM---IS--RVNMVIVGVHAVMANGGVIA-PAGLHVLALAAKKHDVPFVVVAS 309 (406)
Q Consensus 242 ~a~~L~~~GI~---vt~I~Dsav~~~---m~--~vd~VllGAdav~~nG~vvn-k~GT~~lAl~Ak~~~vPv~V~ae 309 (406)
+.+.+.+.|++ +.+........+ .. ++|.+++|+.. .|++-. -.|+..-.+ .++..+||+|+=+
T Consensus 204 l~~~~~~~g~~~~~~~v~~g~~~~~I~~~a~~~~~dLiVmG~~g---~~~~~~~~~Gsv~~~v-l~~~~~pVLvv~~ 276 (290)
T 3mt0_A 204 CRTFQAEYGFSDEQLHIEEGPADVLIPRTAQKLDAVVTVIGTVA---RTGLSGALIGNTAEVV-LDTLESDVLVLKP 276 (290)
T ss_dssp HHHHHHHHTCCTTTEEEEESCHHHHHHHHHHHHTCSEEEEECCS---SCCGGGCCSCHHHHHH-HTTCSSEEEEECC
T ss_pred HHHHHHHcCCCcceEEEeccCHHHHHHHHHHhcCCCEEEECCCC---CcCCcceecchHHHHH-HhcCCCCEEEECC
Confidence 33344455773 334443333332 23 39999999975 344443 467655444 5667899999854
No 426
>2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A*
Probab=32.31 E-value=63 Score=30.29 Aligned_cols=96 Identities=14% Similarity=0.174 Sum_probs=55.1
Q ss_pred cEEEeccCh-------HHHHHHHHHHHHcCCceEEEEecCCCCcch-HHHHHHHHhCCCceE-EEcchHHHHHhhcCCEE
Q 045642 201 EVILTLGHS-------KFVKEFLCAAKEKKRSFEVFIADGAPKFEG-HILAKELDKKGLKAI-VITDSAVFAMISRVNMV 271 (406)
Q Consensus 201 ~~ILT~g~S-------~tV~~~L~~A~~~~~~f~ViV~EsrP~~eG-~~~a~~L~~~GI~vt-~I~Dsav~~~m~~vd~V 271 (406)
.+|+..|+- ..+.+++....+++.+++++++-..|. +. ..+++.| ...|... .+++..+..++..+|.+
T Consensus 209 ~~i~~~G~~~~~~Kg~~~li~a~~~l~~~~~~~~l~i~G~~~~-~~l~~~~~~~-~~~v~~~g~~~~~~~~~~~~~adv~ 286 (406)
T 2gek_A 209 RTVLFLGRYDEPRKGMAVLLAALPKLVARFPDVEILIVGRGDE-DELREQAGDL-AGHLRFLGQVDDATKASAMRSADVY 286 (406)
T ss_dssp CEEEEESCTTSGGGCHHHHHHHHHHHHTTSTTCEEEEESCSCH-HHHHHHTGGG-GGGEEECCSCCHHHHHHHHHHSSEE
T ss_pred eEEEEEeeeCccccCHHHHHHHHHHHHHHCCCeEEEEEcCCcH-HHHHHHHHhc-cCcEEEEecCCHHHHHHHHHHCCEE
Confidence 367777765 234444455544456788888876665 22 1223333 2222221 34667789999999999
Q ss_pred EEcceeEeeCCCcccccchHHHHHHHhhCCCceEEe
Q 045642 272 IVGVHAVMANGGVIAPAGLHVLALAAKKHDVPFVVV 307 (406)
Q Consensus 272 llGAdav~~nG~vvnk~GT~~lAl~Ak~~~vPv~V~ 307 (406)
|+.... ..| .| ...+=|-.+|+||++-
T Consensus 287 v~ps~~--~e~-----~~--~~~~Ea~a~G~PvI~~ 313 (406)
T 2gek_A 287 CAPHLG--GES-----FG--IVLVEAMAAGTAVVAS 313 (406)
T ss_dssp EECCCS--CCS-----SC--HHHHHHHHHTCEEEEC
T ss_pred EecCCC--CCC-----Cc--hHHHHHHHcCCCEEEe
Confidence 987310 111 12 2345566779999873
No 427
>2oas_A ATOA, 4-hydroxybutyrate coenzyme A transferase; alpha beta protein, structural genomics, PSI-2, protein STRU initiative; HET: COA; 2.40A {Shewanella oneidensis}
Probab=32.31 E-value=34 Score=34.24 Aligned_cols=97 Identities=19% Similarity=0.143 Sum_probs=58.0
Q ss_pred HHHHHHhcccCcEEEeccChHHHHHHHHHHHHc---CCceEEEEecC-CC----------------CcchHHHHHHHHhC
Q 045642 190 AEQAMELIHQNEVILTLGHSKFVKEFLCAAKEK---KRSFEVFIADG-AP----------------KFEGHILAKELDKK 249 (406)
Q Consensus 190 ~~~a~~~I~~g~~ILT~g~S~tV~~~L~~A~~~---~~~f~ViV~Es-rP----------------~~eG~~~a~~L~~~ 249 (406)
++.|+++|++|++|...|....-..++....++ -++++++-.-+ .| ++-|-.+++...+-
T Consensus 9 aeeAv~~IkdG~tI~~ggf~g~P~~Li~AL~~r~~~~kdLtl~~~~s~g~~~~~~~~l~~~i~~~~~~~~~~lr~~i~~G 88 (436)
T 2oas_A 9 ALEAVSLIRSGETLWTHSMGATPKVLLDALAKHALTLDNITLLQLHTEGAESLSHPSLLGHLRHRCFFGGVPTRPLLQSG 88 (436)
T ss_dssp HHHHHTTCCTTCEEEECCBTTCCHHHHHHHHHHGGGCCSEEEEESSBSSCGGGGSGGGTTTEEEEESSCCTTTHHHHHTT
T ss_pred HHHHHhhCCCCCEEEECCccCcHHHHHHHHHHhhccCCCEEEEEecccCChhhhHHHhcCcEEEeecCCCHHHHHHHHcC
Confidence 356778899999999977655444444443333 36788876321 11 11222345555544
Q ss_pred CCceEEEcchHHHHHhh----cCCEEEEcceeEeeCCCccc
Q 045642 250 GLKAIVITDSAVFAMIS----RVNMVIVGVHAVMANGGVIA 286 (406)
Q Consensus 250 GI~vt~I~Dsav~~~m~----~vd~VllGAdav~~nG~vvn 286 (406)
++..+-+.-+.+..++. ++|..++.+...-.+|.+.-
T Consensus 89 ~~~y~P~~ls~~~~~l~~~~l~~DVAlI~as~aD~~Gn~s~ 129 (436)
T 2oas_A 89 DADYVPIFLSEVPKLFRSGEQKIDTAIIQVSPPDKHGMCSL 129 (436)
T ss_dssp SSEECCCCGGGHHHHHHTTSSCCSEEEEEECCCCTTCEEEC
T ss_pred CCeeeCCccccHHHHHHcCCCCCCEEEEEeccCCCCceEEE
Confidence 44444444444544433 48999999999888888764
No 428
>2ark_A Flavodoxin; FMN, structural genomics, PSI, structure initiative, midwest center for structural genomic electron transport; 2.40A {Aquifex aeolicus} SCOP: c.23.5.8
Probab=32.26 E-value=68 Score=27.38 Aligned_cols=65 Identities=11% Similarity=-0.050 Sum_probs=37.9
Q ss_pred HHHHHh-CCCceEEEcchHH-HHHhhcCCEEEEcceeEeeCCCcccccchHHHHHHH----hhCCCceEEecC
Q 045642 243 AKELDK-KGLKAIVITDSAV-FAMISRVNMVIVGVHAVMANGGVIAPAGLHVLALAA----KKHDVPFVVVAS 309 (406)
Q Consensus 243 a~~L~~-~GI~vt~I~Dsav-~~~m~~vd~VllGAdav~~nG~vvnk~GT~~lAl~A----k~~~vPv~V~ae 309 (406)
++.|.+ .|++++++.-... ..-+.++|.+|+|+=.. +|++-..+-.+.=-+.. +..++|+.+++-
T Consensus 26 ~~~l~~~~g~~v~~~~l~~~~~~~l~~aD~ii~gsP~y--~g~~~~~lk~fld~~~~~~~~~l~gk~~~~~~t 96 (188)
T 2ark_A 26 AEGARSLEGTEVRLKHVDEATKEDVLWADGLAVGSPTN--MGLVSWKMKRFFDDVLGDLWGEIDGKIACAFSS 96 (188)
T ss_dssp HHHHHTSTTEEEEEEETTTCCHHHHHHCSEEEEEEECB--TTBCCHHHHHHHHHTGGGTTTSCTTCEEEEEEE
T ss_pred HHHHhhcCCCeEEEEEhhhCCHHHHHhCCEEEEEeCcc--CCcCCHHHHHHHHHHhhhhHHHhCCCeEEEEEE
Confidence 334445 6777776643332 34567899999998554 67766544333322222 235788887653
No 429
>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A
Probab=32.15 E-value=1.8e+02 Score=27.38 Aligned_cols=100 Identities=12% Similarity=0.057 Sum_probs=56.4
Q ss_pred cEEEeccChHHHHH-HHHHHHHcCCceEEEEecCCCCcchHHHHHHHHhCCCc--eEEEcc-hHHHHHhhcCCEEEEcce
Q 045642 201 EVILTLGHSKFVKE-FLCAAKEKKRSFEVFIADGAPKFEGHILAKELDKKGLK--AIVITD-SAVFAMISRVNMVIVGVH 276 (406)
Q Consensus 201 ~~ILT~g~S~tV~~-~L~~A~~~~~~f~ViV~EsrP~~eG~~~a~~L~~~GI~--vt~I~D-sav~~~m~~vd~VllGAd 276 (406)
..|+..|.+..|-. +.....+++.-.+|.+.+-.+. +| .+..|.....+ +..+.+ ......++.+|.||+-|-
T Consensus 9 mKI~ViGAaG~VG~~la~~L~~~g~~~ev~l~Di~~~-~~--~~~dL~~~~~~~~v~~~~~t~d~~~al~gaDvVi~~ag 85 (326)
T 1smk_A 9 FKVAILGAAGGIGQPLAMLMKMNPLVSVLHLYDVVNA-PG--VTADISHMDTGAVVRGFLGQQQLEAALTGMDLIIVPAG 85 (326)
T ss_dssp EEEEEETTTSTTHHHHHHHHHHCTTEEEEEEEESSSH-HH--HHHHHHTSCSSCEEEEEESHHHHHHHHTTCSEEEECCC
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEeCCCc-Hh--HHHHhhcccccceEEEEeCCCCHHHHcCCCCEEEEcCC
Confidence 46777773222222 2222333454456777775554 44 34566665444 332222 345566899999999876
Q ss_pred eEeeCCC------cccccchHHHHHHHhhCCCc
Q 045642 277 AVMANGG------VIAPAGLHVLALAAKKHDVP 303 (406)
Q Consensus 277 av~~nG~------vvnk~GT~~lAl~Ak~~~vP 303 (406)
.-...|. -.|--++..++-.++.++..
T Consensus 86 ~~~~~g~~r~dl~~~N~~~~~~i~~~i~~~~p~ 118 (326)
T 1smk_A 86 VPRKPGMTRDDLFKINAGIVKTLCEGIAKCCPR 118 (326)
T ss_dssp CCCCSSCCCSHHHHHHHHHHHHHHHHHHHHCTT
T ss_pred cCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCC
Confidence 4443332 24557888888877776643
No 430
>3ffr_A Phosphoserine aminotransferase SERC; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP MSE P33; 1.75A {Cytophaga hutchinsonii atcc 33406}
Probab=32.14 E-value=1.7e+02 Score=26.65 Aligned_cols=95 Identities=11% Similarity=0.132 Sum_probs=48.1
Q ss_pred cEEEeccChHHHHHHHHHHHHcCCceEEEEecCCCCcchHHHHHHHHhCCCceEEEcch--------HHHHHhhcCCEEE
Q 045642 201 EVILTLGHSKFVKEFLCAAKEKKRSFEVFIADGAPKFEGHILAKELDKKGLKAIVITDS--------AVFAMISRVNMVI 272 (406)
Q Consensus 201 ~~ILT~g~S~tV~~~L~~A~~~~~~f~ViV~EsrP~~eG~~~a~~L~~~GI~vt~I~Ds--------av~~~m~~vd~Vl 272 (406)
.+++|.|.+..+..++.... + . +++++..... +......+...|+.+..++.. .+- .-++...|+
T Consensus 63 ~v~~~~g~t~al~~~~~~l~--~-~-~~i~~~~~~~--~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~-~~~~~~~v~ 135 (362)
T 3ffr_A 63 EVLFLASATEIWERIIQNCV--E-K-KSFHCVNGSF--SKRFYEFAGELGREAYKEEAAFGKGFYPADIT-VPADAEIIC 135 (362)
T ss_dssp EEEEESCHHHHHHHHHHHHC--S-S-EEEEEECSHH--HHHHHHHHHHTTCEEEEEECCTTCCCCGGGCC-CCTTCCEEE
T ss_pred EEEEeCCchHHHHHHHHhcc--C-C-cEEEEcCcHH--HHHHHHHHHHhCCCeEEEecCCCCCCCHHHHh-ccCCccEEE
Confidence 35566554444444444433 2 2 7666654333 233444556679988877521 111 112344444
Q ss_pred EcceeEeeCCCcccccchHHHHHHHhhC-CCceEE
Q 045642 273 VGVHAVMANGGVIAPAGLHVLALAAKKH-DVPFVV 306 (406)
Q Consensus 273 lGAdav~~nG~vvnk~GT~~lAl~Ak~~-~vPv~V 306 (406)
+- ..=-..|.+.. --.++-+|++| +++|++
T Consensus 136 ~~-~~~nptG~~~~---l~~i~~la~~~p~~~li~ 166 (362)
T 3ffr_A 136 LT-HNETSSGVSMP---VEDINTFRDKNKDALIFV 166 (362)
T ss_dssp EE-SEETTTTEECC---HHHHTTSGGGSTTSEEEE
T ss_pred EE-cCCCCcceeCC---HHHHHHHHHhCCCCEEEE
Confidence 33 22122343332 23466778999 998887
No 431
>3dod_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, biotin biosynthesis, pyridoxal phosphate, adenosyl-L-methionine; HET: PLP; 1.90A {Bacillus subtilis} SCOP: c.67.1.0 PDB: 3drd_A 3du4_A*
Probab=32.05 E-value=75 Score=30.94 Aligned_cols=117 Identities=13% Similarity=0.177 Sum_probs=57.8
Q ss_pred HHHHHHHHhcc--cCcEEEeccChHHHHHHHHHHHH----cCC--ceEEEEecCCCCcchHH-HHHHHHhC---------
Q 045642 188 GIAEQAMELIH--QNEVILTLGHSKFVKEFLCAAKE----KKR--SFEVFIADGAPKFEGHI-LAKELDKK--------- 249 (406)
Q Consensus 188 ~I~~~a~~~I~--~g~~ILT~g~S~tV~~~L~~A~~----~~~--~f~ViV~EsrP~~eG~~-~a~~L~~~--------- 249 (406)
.+++..+++.. ...+++|.|.|..+...|+.+.. .|+ +-+|++.+ |.+.|.. .+..+...
T Consensus 91 ~la~~l~~~~~~~~~~v~~~~sGseA~~~al~~~~~~~~~~G~~~~~~vi~~~--~~yhg~~~~~~~~~~~~~~~~~~~~ 168 (448)
T 3dod_A 91 QLAETLIDISPKKLTRVFYSDSGAEAMEIALKMAFQYWKNIGKPEKQKFIAMK--NGYHGDTIGAVSVGSIELFHHVYGP 168 (448)
T ss_dssp HHHHHHHHHSCTTEEEEEEESSHHHHHHHHHHHHHHHHHHTTCTTCCEEEEEC---------------------------
T ss_pred HHHHHHHHhCCCCCCEEEEeCchHHHHHHHHHHHHHHHHhhCCCCCCEEEEEC--CCCCCccHHHHHhcCCccccccccC
Confidence 33444344443 23578888889899998888865 341 34666654 3344432 12222110
Q ss_pred -CCceEEEcc-------------------hHHHHHhh--cCCEEEEcceeEe-eCCCcc-cccc-hHHHHHHHhhCCCce
Q 045642 250 -GLKAIVITD-------------------SAVFAMIS--RVNMVIVGVHAVM-ANGGVI-APAG-LHVLALAAKKHDVPF 304 (406)
Q Consensus 250 -GI~vt~I~D-------------------sav~~~m~--~vd~VllGAdav~-~nG~vv-nk~G-T~~lAl~Ak~~~vPv 304 (406)
...+..++. .++-..+. .-+..++=.+.+. .+||.+ -.-+ --.++-+|++|++++
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep~~~~~~G~~~~~~~~l~~l~~l~~~~~~~l 248 (448)
T 3dod_A 169 LMFESYKAPIPYVYRSESGDPDECRDQCLRELAQLLEEHHEEIAALSIESMVQGASGMIVMPEGYLAGVRELCTTYDVLM 248 (448)
T ss_dssp ----CEEECCCCCTTSSSCCHHHHHHHHHHHHHHHHHHHGGGEEEEEEESSEESTTTCEECCTTHHHHHHHHHHHTTCEE
T ss_pred CCCCceEeCCCccccCCccchhhhhHHHHHHHHHHHHhCCCCEEEEEEeCcccCCCCeecCCHHHHHHHHHHHHHhCCEE
Confidence 112233321 22333343 1233344447777 777644 4555 345777899999988
Q ss_pred EE
Q 045642 305 VV 306 (406)
Q Consensus 305 ~V 306 (406)
++
T Consensus 249 I~ 250 (448)
T 3dod_A 249 IV 250 (448)
T ss_dssp EE
T ss_pred EE
Confidence 86
No 432
>2a9o_A Response regulator; essential protein, YYCF/YYCG homolog, signaling protein; 1.65A {Streptococcus pneumoniae} SCOP: c.23.1.1 PDB: 1nxo_A 1nxs_A 1nxv_A 1nxw_A 1nxx_A 1nxp_A 2a9p_A 2a9q_A 1nxt_A* 2a9r_A*
Probab=32.04 E-value=1.5e+02 Score=21.84 Aligned_cols=76 Identities=16% Similarity=0.335 Sum_probs=43.7
Q ss_pred EEEEecCCCCcchHHHHHHHHhCCCceEEEcchHHHH-Hh--hcCCEEEEcceeEeeCCCcccccchHHHHHHHhhCCCc
Q 045642 227 EVFIADGAPKFEGHILAKELDKKGLKAIVITDSAVFA-MI--SRVNMVIVGVHAVMANGGVIAPAGLHVLALAAKKHDVP 303 (406)
Q Consensus 227 ~ViV~EsrP~~eG~~~a~~L~~~GI~vt~I~Dsav~~-~m--~~vd~VllGAdav~~nG~vvnk~GT~~lAl~Ak~~~vP 303 (406)
+|.++|..|.. ...+...|...|..+....+..-+. .+ ...|.|++..+- ++ .-|--.+..+.+...+|
T Consensus 3 ~ilivdd~~~~-~~~l~~~l~~~~~~v~~~~~~~~a~~~~~~~~~dlvl~D~~l--~~-----~~g~~~~~~l~~~~~~~ 74 (120)
T 2a9o_A 3 KILIVDDEKPI-SDIIKFNMTKEGYEVVTAFNGREALEQFEAEQPDIIILDLML--PE-----IDGLEVAKTIRKTSSVP 74 (120)
T ss_dssp EEEEECSCHHH-HHHHHHHHHHTTCEEEEESSHHHHHHHHHHHCCSEEEECSSC--SS-----SCHHHHHHHHHHHCCCC
T ss_pred eEEEEcCCHHH-HHHHHHHHHhcCcEEEEecCHHHHHHHHHhCCCCEEEEeccC--CC-----CCHHHHHHHHHhCCCCC
Confidence 56777766532 2345566667788777666543221 22 247888876532 22 23444444444567899
Q ss_pred eEEecCC
Q 045642 304 FVVVAST 310 (406)
Q Consensus 304 v~V~aes 310 (406)
+++++..
T Consensus 75 ii~~s~~ 81 (120)
T 2a9o_A 75 ILMLSAK 81 (120)
T ss_dssp EEEEESC
T ss_pred EEEEecC
Confidence 9998754
No 433
>2r85_A PURP protein PF1517; ATP-grAsp superfamily, unknown function; HET: AMP; 1.70A {Pyrococcus furiosus} SCOP: c.30.1.8 d.142.1.9 PDB: 2r84_A* 2r86_A* 2r87_A*
Probab=31.80 E-value=89 Score=28.79 Aligned_cols=19 Identities=16% Similarity=0.307 Sum_probs=8.5
Q ss_pred chHHHHHHHHhCCCceEEE
Q 045642 238 EGHILAKELDKKGLKAIVI 256 (406)
Q Consensus 238 eG~~~a~~L~~~GI~vt~I 256 (406)
.|+.+++.+.+.|+.+.++
T Consensus 12 ~~~~l~~a~~~~G~~v~~~ 30 (334)
T 2r85_A 12 SALQILKGAKDEGFETIAF 30 (334)
T ss_dssp THHHHHHHHHHTTCCEEEE
T ss_pred hHHHHHHHHHhCCCEEEEE
Confidence 3444444444444444443
No 434
>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8}
Probab=31.78 E-value=1.6e+02 Score=25.51 Aligned_cols=74 Identities=15% Similarity=0.222 Sum_probs=44.4
Q ss_pred cEEEeccChHHHHHHHHHHHHcCCceEEEEecCCCCcchHHHHHHHHhCCCceEE--Ecc----hHHHHHh-------hc
Q 045642 201 EVILTLGHSKFVKEFLCAAKEKKRSFEVFIADGAPKFEGHILAKELDKKGLKAIV--ITD----SAVFAMI-------SR 267 (406)
Q Consensus 201 ~~ILT~g~S~tV~~~L~~A~~~~~~f~ViV~EsrP~~eG~~~a~~L~~~GI~vt~--I~D----sav~~~m-------~~ 267 (406)
.+||..|.|+.+=..+..... .+..+|+++.+|.......++++|.+.|.++.. ..| ..+..++ .+
T Consensus 2 k~vlITGasggiG~~~a~~l~-~~G~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 80 (245)
T 2ph3_A 2 RKALITGASRGIGRAIALRLA-EDGFALAIHYGQNREKAEEVAEEARRRGSPLVAVLGANLLEAEAATALVHQAAEVLGG 80 (245)
T ss_dssp CEEEETTTTSHHHHHHHHHHH-TTTCEEEEEESSCHHHHHHHHHHHHHTTCSCEEEEECCTTSHHHHHHHHHHHHHHHTC
T ss_pred CEEEEeCCCchHHHHHHHHHH-HCCCEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHHHhcCC
Confidence 467888888877766655442 244688887555433445667777777766544 334 2333333 35
Q ss_pred CCEEEEcc
Q 045642 268 VNMVIVGV 275 (406)
Q Consensus 268 vd~VllGA 275 (406)
+|.||--|
T Consensus 81 ~d~li~~A 88 (245)
T 2ph3_A 81 LDTLVNNA 88 (245)
T ss_dssp CCEEEECC
T ss_pred CCEEEECC
Confidence 77777655
No 435
>3ppl_A Aspartate aminotransferase; dimer, PLP-dependent transferase-like fold structural genomics, joint center for structural genomics; HET: MSE PLP UNL; 1.25A {Corynebacterium glutamicum}
Probab=31.78 E-value=2.6e+02 Score=26.50 Aligned_cols=101 Identities=15% Similarity=0.181 Sum_probs=54.5
Q ss_pred cccCcEEEeccChHHHH--HHHHHHHH--cC--------CceEEEEecCCCCcchHHHHHHHHhCCCceEEEc------c
Q 045642 197 IHQNEVILTLGHSKFVK--EFLCAAKE--KK--------RSFEVFIADGAPKFEGHILAKELDKKGLKAIVIT------D 258 (406)
Q Consensus 197 I~~g~~ILT~g~S~tV~--~~L~~A~~--~~--------~~f~ViV~EsrP~~eG~~~a~~L~~~GI~vt~I~------D 258 (406)
+....+++|.|.+..+. .++..... .| ..-+|++. .|.+.+.. ..+...|..+..++ |
T Consensus 93 ~~~~~i~~t~G~~~al~~~~~~~~l~~~~~g~~~~~~~~~gd~V~v~--~p~y~~~~--~~~~~~g~~~~~v~~~~~g~d 168 (427)
T 3ppl_A 93 VPVEQVLAGDASSLNIMFDVISWSYIFGNNDSVQPWSKEETVKWICP--VPGYDRHF--SITERFGFEMISVPMNEDGPD 168 (427)
T ss_dssp SCGGGEEECSSCHHHHHHHHHHHHHHHCCTTCSSCGGGSSCCEEEEE--ESCCHHHH--HHHHHTTCEEEEEEEETTEEC
T ss_pred CCcceEEEeCCcHHHHHHHHHHHHHhccCCcccccccCCCCCEEEEc--CCCcHHHH--HHHHHcCCEEEEeCCCCCCCC
Confidence 44457888888887773 34444443 21 13456654 36666633 34556788877765 2
Q ss_pred -hHHHHHhhcCCEEEEcceeEeeCCCcccccchH-------HHHHHH-hhCCCceEE
Q 045642 259 -SAVFAMISRVNMVIVGVHAVMANGGVIAPAGLH-------VLALAA-KKHDVPFVV 306 (406)
Q Consensus 259 -sav~~~m~~vd~VllGAdav~~nG~vvnk~GT~-------~lAl~A-k~~~vPv~V 306 (406)
..+-..+.+- .+..|+-+...-|..|+. .++-.| +.+++.+++
T Consensus 169 ~~~l~~~l~~~-----~~~~v~~~p~~~NPtG~~~~~~~~~~l~~~a~~~~~~~ii~ 220 (427)
T 3ppl_A 169 MDAVEELVKNP-----QVKGMWVVPVFSNPTGFTVTEDVAKRLSAMETAAPDFRVVW 220 (427)
T ss_dssp HHHHHHHTTST-----TEEEEEECCSSCTTTCCCCCHHHHHHHHHCCCSSTTCEEEE
T ss_pred HHHHHHHHhcC-----CCeEEEECCCCCCCCCccCCHHHHHHHHHHHhhcCCCEEEE
Confidence 1233333211 122333344455666653 566666 888887765
No 436
>1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A*
Probab=31.74 E-value=90 Score=28.11 Aligned_cols=94 Identities=13% Similarity=0.091 Sum_probs=53.4
Q ss_pred EEEeccChHHHHHHHHHHHHcCCceEEEEecCCCCcchHHHHHHHHhCCCceEEEcchHHHHHhhc--CCEEEEcceeEe
Q 045642 202 VILTLGHSKFVKEFLCAAKEKKRSFEVFIADGAPKFEGHILAKELDKKGLKAIVITDSAVFAMISR--VNMVIVGVHAVM 279 (406)
Q Consensus 202 ~ILT~g~S~tV~~~L~~A~~~~~~f~ViV~EsrP~~eG~~~a~~L~~~GI~vt~I~Dsav~~~m~~--vd~VllGAdav~ 279 (406)
+||..|.++.+=..|..... +..+|+++.-.+. .+.+-+--..++..++.. +|.||--|-...
T Consensus 2 ~ilVtGatG~iG~~l~~~L~--~g~~V~~~~r~~~-------------~~~~D~~d~~~~~~~~~~~~~d~vih~a~~~~ 66 (299)
T 1n2s_A 2 NILLFGKTGQVGWELQRSLA--PVGNLIALDVHSK-------------EFCGDFSNPKGVAETVRKLRPDVIVNAAAHTA 66 (299)
T ss_dssp EEEEECTTSHHHHHHHHHTT--TTSEEEEECTTCS-------------SSCCCTTCHHHHHHHHHHHCCSEEEECCCCCC
T ss_pred eEEEECCCCHHHHHHHHHhh--cCCeEEEeccccc-------------cccccCCCHHHHHHHHHhcCCCEEEECcccCC
Confidence 47777877777666665553 3577887765541 111111111234455554 777776543211
Q ss_pred e---CCC-----cccccchHHHHHHHhhCCCceEEecCC
Q 045642 280 A---NGG-----VIAPAGLHVLALAAKKHDVPFVVVAST 310 (406)
Q Consensus 280 ~---nG~-----vvnk~GT~~lAl~Ak~~~vPv~V~aes 310 (406)
. ... -+|-.|+..++-+|+..++.|+.++..
T Consensus 67 ~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~SS~ 105 (299)
T 1n2s_A 67 VDKAESEPELAQLLNATSVEAIAKAANETGAWVVHYSTD 105 (299)
T ss_dssp HHHHTTCHHHHHHHHTHHHHHHHHHHTTTTCEEEEEEEG
T ss_pred HhhhhcCHHHHHHHHHHHHHHHHHHHHHcCCcEEEEecc
Confidence 0 001 135788999999999999876655443
No 437
>3bb8_A CDP-4-keto-6-deoxy-D-glucose-3-dehydrase; aspartate aminotransferase fold, oxidoreductase; HET: PLP; 2.35A {Yersinia pseudotuberculosis} PDB: 3bcx_A
Probab=31.69 E-value=1.2e+02 Score=29.19 Aligned_cols=102 Identities=21% Similarity=0.110 Sum_probs=52.3
Q ss_pred HhcccCcEEEeccChHHHHHHHHHHH-----H--cCCceEEEEecCCCCcchHHHHHHHHhCCCceEEEcch--------
Q 045642 195 ELIHQNEVILTLGHSKFVKEFLCAAK-----E--KKRSFEVFIADGAPKFEGHILAKELDKKGLKAIVITDS-------- 259 (406)
Q Consensus 195 ~~I~~g~~ILT~g~S~tV~~~L~~A~-----~--~~~~f~ViV~EsrP~~eG~~~a~~L~~~GI~vt~I~Ds-------- 259 (406)
+++...+.|+|-+.+..+..++..+. + .++.-+|++ +.|.+.+...+. ...|+++..++-.
T Consensus 73 ~~~g~~~~i~~~sGt~a~~~al~~l~~~~~~~~~~~~gd~Vi~--~~~~~~~~~~~~--~~~g~~~~~v~~~~~~~~~d~ 148 (437)
T 3bb8_A 73 EYLGVPYVLTTTSGSSANLLALTALTSPKLGVRALKPGDEVIT--VAAGFPTTVNPT--IQNGLIPVFVDVDIPTYNVNA 148 (437)
T ss_dssp HHHTCSEEEEESCHHHHHHHHHHHTTCGGGGGGSCCTTCEEEE--CSSSCHHHHHHH--HHTTCEEEECCEETTTTEECG
T ss_pred HHHCCCcEEEeCCHHHHHHHHHHHhhhcccccccCCCcCEEEE--CCCCcHHHHHHH--HHcCCEEEEEeccCccCCcCH
Confidence 34444467777666655555555441 0 122335555 456666654333 3478887776421
Q ss_pred -HHHHHhhcCCEEEEcceeEeeCCCcccccchHHHHHHHhhCCCceEE
Q 045642 260 -AVFAMISRVNMVIVGVHAVMANGGVIAPAGLHVLALAAKKHDVPFVV 306 (406)
Q Consensus 260 -av~~~m~~vd~VllGAdav~~nG~vvnk~GT~~lAl~Ak~~~vPv~V 306 (406)
.+-..+..-+++|+-++ .-|. ..--..++-+|+.++++|++
T Consensus 149 ~~l~~~i~~~~~~v~~~~---~~g~---~~~~~~i~~l~~~~~~~li~ 190 (437)
T 3bb8_A 149 SLIEAAVSDKTKAIMIAH---TLGN---LFDLAEVRRVADKYNLWLIE 190 (437)
T ss_dssp GGHHHHCCTTEEEEEEEC---GGGC---CCCHHHHHHHHHHHTCEEEE
T ss_pred HHHHHhcCCCCeEEEEeC---CCCC---hhcHHHHHHHHHHcCCEEEE
Confidence 23333322223333222 1222 23345677788888988876
No 438
>1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A*
Probab=31.68 E-value=3e+02 Score=25.09 Aligned_cols=66 Identities=12% Similarity=0.151 Sum_probs=40.1
Q ss_pred ceEE-EEecCCCCcchHHHHHHHHhCCC-ceEEEcc-hHHHHHhhcCCEEEEcceeEeeCCCcccccchHHHHHHHhhCC
Q 045642 225 SFEV-FIADGAPKFEGHILAKELDKKGL-KAIVITD-SAVFAMISRVNMVIVGVHAVMANGGVIAPAGLHVLALAAKKHD 301 (406)
Q Consensus 225 ~f~V-iV~EsrP~~eG~~~a~~L~~~GI-~vt~I~D-sav~~~m~~vd~VllGAdav~~nG~vvnk~GT~~lAl~Ak~~~ 301 (406)
.+++ +++-..+ . ..+.+.+.+.|+ +|++..- ..+..+|+.+|.+++.+ | ....+=|-.+|
T Consensus 212 ~~~~l~i~G~~~-~--~~l~~~~~~~~~~~v~~~g~~~~~~~~~~~ad~~v~~s------g--------~~~~~EAma~G 274 (364)
T 1f0k_A 212 SVTIWHQSGKGS-Q--QSVEQAYAEAGQPQHKVTEFIDDMAAAYAWADVVVCRS------G--------ALTVSEIAAAG 274 (364)
T ss_dssp GEEEEEECCTTC-H--HHHHHHHHHTTCTTSEEESCCSCHHHHHHHCSEEEECC------C--------HHHHHHHHHHT
T ss_pred CcEEEEEcCCch-H--HHHHHHHhhcCCCceEEecchhhHHHHHHhCCEEEECC------c--------hHHHHHHHHhC
Confidence 5774 4444444 1 234444455565 4555532 35788899999988863 2 33445566779
Q ss_pred CceEEe
Q 045642 302 VPFVVV 307 (406)
Q Consensus 302 vPv~V~ 307 (406)
+||++.
T Consensus 275 ~Pvi~~ 280 (364)
T 1f0k_A 275 LPALFV 280 (364)
T ss_dssp CCEEEC
T ss_pred CCEEEe
Confidence 999985
No 439
>2qzj_A Two-component response regulator; 11017X, PSI-II, structural genomics; 2.89A {Clostridium difficile}
Probab=31.60 E-value=1.3e+02 Score=23.38 Aligned_cols=78 Identities=14% Similarity=0.227 Sum_probs=44.9
Q ss_pred ceEEEEecCCCCcchHHHHHHHHhCCCceEEEcchHHH-HHhh--cCCEEEEcceeEeeCCCcccccchHHHHHHHhhCC
Q 045642 225 SFEVFIADGAPKFEGHILAKELDKKGLKAIVITDSAVF-AMIS--RVNMVIVGVHAVMANGGVIAPAGLHVLALAAKKHD 301 (406)
Q Consensus 225 ~f~ViV~EsrP~~eG~~~a~~L~~~GI~vt~I~Dsav~-~~m~--~vd~VllGAdav~~nG~vvnk~GT~~lAl~Ak~~~ 301 (406)
..+|.++|..|.. ...+...|...|+.|....+..-+ ..+. +.|.||+..+ +++ .-|--.+..+-+...
T Consensus 4 ~~~Ilivdd~~~~-~~~l~~~L~~~g~~v~~~~~~~~al~~~~~~~~dlvllD~~--l~~-----~~g~~l~~~l~~~~~ 75 (136)
T 2qzj_A 4 QTKILIIDGDKDN-CQKLKGFLEEKGISIDLAYNCEEAIGKIFSNKYDLIFLEII--LSD-----GDGWTLCKKIRNVTT 75 (136)
T ss_dssp CCEEEEECSCHHH-HHHHHHHHHTTTCEEEEESSHHHHHHHHHHCCCSEEEEESE--ETT-----EEHHHHHHHHHTTCC
T ss_pred CCeEEEEcCCHHH-HHHHHHHHHHCCCEEEEECCHHHHHHHHHhcCCCEEEEeCC--CCC-----CCHHHHHHHHccCCC
Confidence 3567777776642 234566677778887766654322 2222 4788888654 222 234334444444458
Q ss_pred CceEEecCC
Q 045642 302 VPFVVVAST 310 (406)
Q Consensus 302 vPv~V~aes 310 (406)
+|+++++..
T Consensus 76 ~~ii~ls~~ 84 (136)
T 2qzj_A 76 CPIVYMTYI 84 (136)
T ss_dssp CCEEEEESC
T ss_pred CCEEEEEcC
Confidence 999988754
No 440
>2ywj_A Glutamine amidotransferase subunit PDXT; uncharacterized conserved protein, structural genomics; 1.90A {Methanocaldococcus jannaschii}
Probab=31.60 E-value=1.5e+02 Score=25.03 Aligned_cols=64 Identities=17% Similarity=0.258 Sum_probs=38.4
Q ss_pred HHHHHHHhCCCceEEEcchHHHHHhhcCCEEEEcceeEeeCCCcccccchHH----HHHHHhhCCCceEEecCCcccc
Q 045642 241 ILAKELDKKGLKAIVITDSAVFAMISRVNMVIVGVHAVMANGGVIAPAGLHV----LALAAKKHDVPFVVVASTHELC 314 (406)
Q Consensus 241 ~~a~~L~~~GI~vt~I~Dsav~~~m~~vd~VllGAdav~~nG~vvnk~GT~~----lAl~Ak~~~vPv~V~aes~K~~ 314 (406)
...+.|.+.|+.+.++++.. .+.++|.+|++ ||--+..+... +.-..+..++|++-+|--+-+-
T Consensus 14 ~~~~~l~~~G~~~~~~~~~~---~~~~~dglil~-------GG~~~~~~~~~~~~~~~~~i~~~~~PilGIC~G~Qll 81 (186)
T 2ywj_A 14 EHEEAIKKAGYEAKKVKRVE---DLEGIDALIIP-------GGESTAIGKLMKKYGLLEKIKNSNLPILGTCAGMVLL 81 (186)
T ss_dssp HHHHHHHHTTSEEEEECSGG---GGTTCSEEEEC-------CSCHHHHHHHHHHTTHHHHHHTCCCCEEEETHHHHHH
T ss_pred HHHHHHHHCCCEEEEECChH---HhccCCEEEEC-------CCCchhhhhhhhccCHHHHHHhcCCcEEEECHHHHHH
Confidence 45688899999999888632 35667777774 33111111100 1122347899999988655443
No 441
>3bcv_A Putative glycosyltransferase protein; protein structure initiative II, PSI-II NYSGXRC, structural genomics; 2.35A {Bacteroides fragilis}
Probab=31.59 E-value=94 Score=26.81 Aligned_cols=56 Identities=11% Similarity=0.159 Sum_probs=35.9
Q ss_pred EEEeccChHHHHHHHHHHHHcC-CceEEEEecCCCCcchHHHHHHHHhCCCceEEEc
Q 045642 202 VILTLGHSKFVKEFLCAAKEKK-RSFEVFIADGAPKFEGHILAKELDKKGLKAIVIT 257 (406)
Q Consensus 202 ~ILT~g~S~tV~~~L~~A~~~~-~~f~ViV~EsrP~~eG~~~a~~L~~~GI~vt~I~ 257 (406)
+|.||.....+.+.|....++. ..++|||++.....+-...++++.+..-.+.++.
T Consensus 10 iIp~yn~~~~l~~~l~Sl~~q~~~~~eiIvvDd~S~d~t~~~~~~~~~~~~~i~~i~ 66 (240)
T 3bcv_A 10 IVPIYNVEKYLDQCVQALLAQTLSDIEIILIDDESPDNCPKICDDYAAQYPNIKVIH 66 (240)
T ss_dssp EEEESSCTTTHHHHHHHHHTCSSSSEEEEEEECCCSSSHHHHHHHHHHHCSSEEEEE
T ss_pred EEecCCCHHHHHHHHHHHHhCcCCCeEEEEEECCCCcCHHHHHHHHHhhCCCEEEEE
Confidence 3556777778888888876543 4688888876665555566666655433455553
No 442
>1b5p_A Protein (aspartate aminotransferase); pyridoxal enzyme; HET: PLP; 1.80A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1gck_A* 1b5o_A* 5bj4_A* 1gc4_A* 1gc3_A* 1bkg_A* 5bj3_A* 1bjw_A*
Probab=31.57 E-value=1.3e+02 Score=28.28 Aligned_cols=95 Identities=20% Similarity=0.190 Sum_probs=51.1
Q ss_pred cCcEEEeccChHHHHHHHHHHHHcCCceEEEEecCCCCcchHHHHHHHHhCCCceEEEcchH-------HHHHhhcC---
Q 045642 199 QNEVILTLGHSKFVKEFLCAAKEKKRSFEVFIADGAPKFEGHILAKELDKKGLKAIVITDSA-------VFAMISRV--- 268 (406)
Q Consensus 199 ~g~~ILT~g~S~tV~~~L~~A~~~~~~f~ViV~EsrP~~eG~~~a~~L~~~GI~vt~I~Dsa-------v~~~m~~v--- 268 (406)
...+++|.|.+..+..++....+.| -+|++. .|.+.+.. ..+...|..+..++-.. ...+-+.+
T Consensus 91 ~~~i~~t~g~~~al~~~~~~l~~~g--d~Vlv~--~p~y~~~~--~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~ 164 (385)
T 1b5p_A 91 PEETIVTVGGSQALFNLFQAILDPG--DEVIVL--SPYWVSYP--EMVRFAGGVVVEVETLPEEGFVPDPERVRRAITPR 164 (385)
T ss_dssp GGGEEEESHHHHHHHHHHHHHCCTT--CEEEEE--ESCCTHHH--HHHHHTTCEEEEEECCGGGTTCCCHHHHHTTCCTT
T ss_pred hHHEEEcCChHHHHHHHHHHhcCCC--CEEEEc--CCCchhHH--HHHHHcCCEEEEeecCcccCCCCCHHHHHHhcCCC
Confidence 4467888777777666666554333 355555 35555532 33445788877775311 11221111
Q ss_pred CEEEEcceeEeeCCCcccccch-------HHHHHHHhhCCCceEE
Q 045642 269 NMVIVGVHAVMANGGVIAPAGL-------HVLALAAKKHDVPFVV 306 (406)
Q Consensus 269 d~VllGAdav~~nG~vvnk~GT-------~~lAl~Ak~~~vPv~V 306 (406)
.++|+=+ ..-|.+|+ ..++-.|+.+++.|++
T Consensus 165 ~~~v~~~-------~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~ 202 (385)
T 1b5p_A 165 TKALVVN-------SPNNPTGAVYPKEVLEALARLAVEHDFYLVS 202 (385)
T ss_dssp EEEEEEE-------SSCTTTCCCCCHHHHHHHHHHHHHTTCEEEE
T ss_pred CEEEEEe-------CCCCCCCCCcCHHHHHHHHHHHHHcCCEEEE
Confidence 2222211 23355565 4567788899988776
No 443
>1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2
Probab=31.50 E-value=1.8e+02 Score=30.29 Aligned_cols=110 Identities=15% Similarity=0.139 Sum_probs=60.0
Q ss_pred cCcEEEeccChHHHHHHHHHH-HHcCCceEEEEecCCCCcch--HHHHHHHHhCCCceEEE--cc-hHHHHHhh--cCCE
Q 045642 199 QNEVILTLGHSKFVKEFLCAA-KEKKRSFEVFIADGAPKFEG--HILAKELDKKGLKAIVI--TD-SAVFAMIS--RVNM 270 (406)
Q Consensus 199 ~g~~ILT~g~S~tV~~~L~~A-~~~~~~f~ViV~EsrP~~eG--~~~a~~L~~~GI~vt~I--~D-sav~~~m~--~vd~ 270 (406)
.+.+||+.|.++.+=..|... .++| .+|+++..++.... ..-.+.+...++.+... .| .++..++. ++|.
T Consensus 10 ~~~~ilVTGatG~IG~~l~~~L~~~G--~~V~~~~r~~~~~~~~~~~l~~~~~~~v~~v~~Dl~d~~~l~~~~~~~~~D~ 87 (699)
T 1z45_A 10 TSKIVLVTGGAGYIGSHTVVELIENG--YDCVVADNLSNSTYDSVARLEVLTKHHIPFYEVDLCDRKGLEKVFKEYKIDS 87 (699)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTT--CEEEEEECCSSCCTHHHHHHHHHHTSCCCEEECCTTCHHHHHHHHHHSCCCE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCc--CEEEEEECCCcchHHHHHHHhhccCCceEEEEcCCCCHHHHHHHHHhCCCCE
Confidence 356888888887776655444 3334 67888765543221 11122333455554322 22 34556666 5666
Q ss_pred EEEcceeEeeCC--------CcccccchHHHHHHHhhCCCceEEecCC
Q 045642 271 VIVGVHAVMANG--------GVIAPAGLHVLALAAKKHDVPFVVVAST 310 (406)
Q Consensus 271 VllGAdav~~nG--------~vvnk~GT~~lAl~Ak~~~vPv~V~aes 310 (406)
||--|-...... --+|-.|+..++-+|+..+++-+|...+
T Consensus 88 Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~~~iV~~SS 135 (699)
T 1z45_A 88 VIHFAGLKAVGESTQIPLRYYHNNILGTVVLLELMQQYNVSKFVFSSS 135 (699)
T ss_dssp EEECCSCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEE
T ss_pred EEECCcccCcCccccCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEECc
Confidence 665442211000 0135578888988888888765555444
No 444
>4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A*
Probab=31.49 E-value=86 Score=29.66 Aligned_cols=19 Identities=16% Similarity=0.204 Sum_probs=15.1
Q ss_pred HHHHHhhCCCceEEecCCc
Q 045642 293 LALAAKKHDVPFVVVASTH 311 (406)
Q Consensus 293 lAl~Ak~~~vPv~V~aes~ 311 (406)
.+++|+..++|++.....+
T Consensus 136 ~~~~a~~~giP~v~~~~~~ 154 (398)
T 4fzr_A 136 GPLVAATLGIPWIEQSIRL 154 (398)
T ss_dssp HHHHHHHHTCCEEEECCSS
T ss_pred HHHHHHhhCCCEEEeccCC
Confidence 4678899999999877554
No 445
>1qo0_D AMIR; binding protein, gene regulator, receptor; 2.25A {Pseudomonas aeruginosa} SCOP: c.23.1.3
Probab=31.39 E-value=33 Score=29.04 Aligned_cols=77 Identities=14% Similarity=0.121 Sum_probs=43.7
Q ss_pred CceEEEEecCCCCcchHHHHHHHHhCCCceEEEcchHHHHHhhcCCEEEEcceeEeeCCCcccccchHHHHHHHhh-CCC
Q 045642 224 RSFEVFIADGAPKFEGHILAKELDKKGLKAIVITDSAVFAMISRVNMVIVGVHAVMANGGVIAPAGLHVLALAAKK-HDV 302 (406)
Q Consensus 224 ~~f~ViV~EsrP~~eG~~~a~~L~~~GI~vt~I~Dsav~~~m~~vd~VllGAdav~~nG~vvnk~GT~~lAl~Ak~-~~v 302 (406)
+..+|.|+|..|.. ...+...|...|+.+....++.-+. -...|.||+..+ +++ .-|. .+....+. ..+
T Consensus 11 ~~~~iLivdd~~~~-~~~l~~~L~~~g~~v~~~~~~~~al-~~~~dlvl~D~~--mp~-----~~g~-l~~~~~~~~~~~ 80 (196)
T 1qo0_D 11 RELQVLVLNPPGEV-SDALVLQLIRIGCSVRQCWPPPEAF-DVPVDVVFTSIF--QNR-----HHDE-IAALLAAGTPRT 80 (196)
T ss_dssp GGCEEEEESCTTHH-HHHHHHHHHHHTCEEEEECSCCSSC-SSCCSEEEEECC--SST-----HHHH-HHHHHHHSCTTC
T ss_pred cCCeEEEEcCChhH-HHHHHHHHHHcCCeEEEecCchhhC-CCCCCEEEEeCC--CCc-----cchH-HHHHHhccCCCC
Confidence 35677777777642 2344555666677777665543211 235677777543 222 1144 33344444 689
Q ss_pred ceEEecCC
Q 045642 303 PFVVVAST 310 (406)
Q Consensus 303 Pv~V~aes 310 (406)
||++++..
T Consensus 81 ~ii~lt~~ 88 (196)
T 1qo0_D 81 TLVALVEY 88 (196)
T ss_dssp EEEEEECC
T ss_pred CEEEEEcC
Confidence 99999765
No 446
>3op7_A Aminotransferase class I and II; PLP-dependent transferase, structural genomics, joint center structural genomics, JCSG; HET: LLP UNL; 1.70A {Streptococcus suis 89} PDB: 3p6k_A*
Probab=31.38 E-value=1.3e+02 Score=27.92 Aligned_cols=102 Identities=16% Similarity=0.140 Sum_probs=57.2
Q ss_pred ccCcEEEeccChHHHHHHHHHHHHcCCceEEEEecCCCCcchHHHHHHHHhCCCceEEEc---------c-hHHHHHh-h
Q 045642 198 HQNEVILTLGHSKFVKEFLCAAKEKKRSFEVFIADGAPKFEGHILAKELDKKGLKAIVIT---------D-SAVFAMI-S 266 (406)
Q Consensus 198 ~~g~~ILT~g~S~tV~~~L~~A~~~~~~f~ViV~EsrP~~eG~~~a~~L~~~GI~vt~I~---------D-sav~~~m-~ 266 (406)
....+++|.|.+..+..++....+.| -+|++. .|.+.+.. ..+...|.++..++ | ..+-..+ +
T Consensus 80 ~~~~v~~~~g~~~a~~~~~~~l~~~g--d~Vl~~--~~~~~~~~--~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~ 153 (375)
T 3op7_A 80 KPEQILQTNGATGANLLVLYSLIEPG--DHVISL--YPTYQQLY--DIPKSLGAEVDLWQIEEENGWLPDLEKLRQLIRP 153 (375)
T ss_dssp CGGGEEEESHHHHHHHHHHHHHCCTT--CEEEEE--ESSCTHHH--HHHHHTTCEEEEEEEEGGGTTEECHHHHHHHCCT
T ss_pred ChhhEEEcCChHHHHHHHHHHhcCCC--CEEEEe--CCCchhHH--HHHHHcCCEEEEEeccccCCCCCCHHHHHHhhcc
Confidence 34567888777777777776664333 355554 35565532 33556788777664 2 1233333 3
Q ss_pred cCCEEEEcceeEeeCCCcccccchHHHHHHHhhCCCceEE
Q 045642 267 RVNMVIVGVHAVMANGGVIAPAGLHVLALAAKKHDVPFVV 306 (406)
Q Consensus 267 ~vd~VllGAdav~~nG~vvnk~GT~~lAl~Ak~~~vPv~V 306 (406)
++..|++- ..--+.|.+...---..++-+|+.|++++++
T Consensus 154 ~~~~v~~~-~~~nptG~~~~~~~l~~i~~la~~~~~~li~ 192 (375)
T 3op7_A 154 TTKMICIN-NANNPTGAVMDRTYLEELVEIASEVGAYILS 192 (375)
T ss_dssp TCCEEEEE-SSCTTTCCCCCHHHHHHHHHHHHTTTCEEEE
T ss_pred CCeEEEEc-CCCCCCCCCCCHHHHHHHHHHHHHcCCEEEE
Confidence 45455442 1112334444333355677789999998887
No 447
>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}
Probab=31.30 E-value=1.2e+02 Score=27.74 Aligned_cols=102 Identities=14% Similarity=0.123 Sum_probs=54.5
Q ss_pred cEEEeccChHHHHHHHHHH-HHcCCceEEEEecCCCCcchHHHHHHHHhCCCceEEEcc----hHHHHHhh--cCCEEEE
Q 045642 201 EVILTLGHSKFVKEFLCAA-KEKKRSFEVFIADGAPKFEGHILAKELDKKGLKAIVITD----SAVFAMIS--RVNMVIV 273 (406)
Q Consensus 201 ~~ILT~g~S~tV~~~L~~A-~~~~~~f~ViV~EsrP~~eG~~~a~~L~~~GI~vt~I~D----sav~~~m~--~vd~Vll 273 (406)
.+||..|.++.+=..|... .++| .+|+++...+...- +.|. .++.+. ..| .++..++. ++|.||-
T Consensus 2 ~~ilVtGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~----~~~~-~~~~~~-~~D~~~~~~~~~~~~~~~~d~vih 73 (330)
T 2c20_A 2 NSILICGGAGYIGSHAVKKLVDEG--LSVVVVDNLQTGHE----DAIT-EGAKFY-NGDLRDKAFLRDVFTQENIEAVMH 73 (330)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT--CEEEEEECCSSCCG----GGSC-TTSEEE-ECCTTCHHHHHHHHHHSCEEEEEE
T ss_pred CEEEEECCCcHHHHHHHHHHHhCC--CEEEEEeCCCcCch----hhcC-CCcEEE-ECCCCCHHHHHHHHhhcCCCEEEE
Confidence 3678888877776655443 3334 67777754332211 1121 134332 223 34555666 5666665
Q ss_pred cceeEeeCC--------CcccccchHHHHHHHhhCCCceEEecCC
Q 045642 274 GVHAVMANG--------GVIAPAGLHVLALAAKKHDVPFVVVAST 310 (406)
Q Consensus 274 GAdav~~nG--------~vvnk~GT~~lAl~Ak~~~vPv~V~aes 310 (406)
-|-...... --+|-.||..++-+|+..+++-+|.+.+
T Consensus 74 ~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~Ss 118 (330)
T 2c20_A 74 FAADSLVGVSMEKPLQYYNNNVYGALCLLEVMDEFKVDKFIFSST 118 (330)
T ss_dssp CCCCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred CCcccCccccccCHHHHHHHHhHHHHHHHHHHHHcCCCEEEEeCC
Confidence 442211000 0135679999999999999865555544
No 448
>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*
Probab=31.27 E-value=52 Score=30.77 Aligned_cols=109 Identities=17% Similarity=0.104 Sum_probs=59.0
Q ss_pred cCcEEEeccChHHHHHHHHHHHHcCCceEEEEecCCCCcchHHHHHHHH-hCCCceEEEcc----hHHHHHhhc--CCEE
Q 045642 199 QNEVILTLGHSKFVKEFLCAAKEKKRSFEVFIADGAPKFEGHILAKELD-KKGLKAIVITD----SAVFAMISR--VNMV 271 (406)
Q Consensus 199 ~g~~ILT~g~S~tV~~~L~~A~~~~~~f~ViV~EsrP~~eG~~~a~~L~-~~GI~vt~I~D----sav~~~m~~--vd~V 271 (406)
.+.+||+.|.++.+=..|.....+ +..+|+++.-++.... .+...+. ..++.+. ..| .++..++.. +|.|
T Consensus 8 ~~~~vlVtGatG~iG~~l~~~L~~-~g~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~-~~Dl~d~~~~~~~~~~~~~d~v 84 (357)
T 1rkx_A 8 QGKRVFVTGHTGFKGGWLSLWLQT-MGATVKGYSLTAPTVP-SLFETARVADGMQSE-IGDIRDQNKLLESIREFQPEIV 84 (357)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHH-TTCEEEEEESSCSSSS-CHHHHTTTTTTSEEE-ECCTTCHHHHHHHHHHHCCSEE
T ss_pred CCCEEEEECCCchHHHHHHHHHHh-CCCeEEEEeCCCcccc-hhhHhhccCCceEEE-EccccCHHHHHHHHHhcCCCEE
Confidence 356888889888776666544322 2367887765543221 1122221 1233322 233 345555665 7777
Q ss_pred EEcceeEeeC----C----CcccccchHHHHHHHhhCC-CceEEecCC
Q 045642 272 IVGVHAVMAN----G----GVIAPAGLHVLALAAKKHD-VPFVVVAST 310 (406)
Q Consensus 272 llGAdav~~n----G----~vvnk~GT~~lAl~Ak~~~-vPv~V~aes 310 (406)
|--|-....+ . --+|-.||..++-+|+.++ ++-+|...+
T Consensus 85 ih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~SS 132 (357)
T 1rkx_A 85 FHMAAQPLVRLSYSEPVETYSTNVMGTVYLLEAIRHVGGVKAVVNITS 132 (357)
T ss_dssp EECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHCCCCEEEEECC
T ss_pred EECCCCcccccchhCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEecC
Confidence 7655321100 0 0147789999998888876 655555544
No 449
>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2
Probab=31.12 E-value=69 Score=29.01 Aligned_cols=95 Identities=14% Similarity=0.069 Sum_probs=55.8
Q ss_pred cCcEEEeccChHHHHHHHHHH-HHcCCceEEEEecCCCCcchHHHHHHHHhCCCceEEE-cc----hHHHHHh-------
Q 045642 199 QNEVILTLGHSKFVKEFLCAA-KEKKRSFEVFIADGAPKFEGHILAKELDKKGLKAIVI-TD----SAVFAMI------- 265 (406)
Q Consensus 199 ~g~~ILT~g~S~tV~~~L~~A-~~~~~~f~ViV~EsrP~~eG~~~a~~L~~~GI~vt~I-~D----sav~~~m------- 265 (406)
.|.++|..|.|+.+=..+... .++| .+|+++.-.+ .....++++|.+.|..+..+ .| ..+..++
T Consensus 20 ~~k~vlVTGas~gIG~aia~~l~~~G--~~V~~~~r~~-~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 96 (273)
T 1ae1_A 20 KGTTALVTGGSKGIGYAIVEELAGLG--ARVYTCSRNE-KELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHVF 96 (273)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHHTT--CEEEEEESCH-HHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred CCCEEEEECCcchHHHHHHHHHHHCC--CEEEEEeCCH-HHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHc
Confidence 467888888887776655443 3344 5788775443 22346677787777776654 34 2333333
Q ss_pred -hcCCEEEEcceeEeeCCCc-------------ccccchHHHHHHH
Q 045642 266 -SRVNMVIVGVHAVMANGGV-------------IAPAGLHVLALAA 297 (406)
Q Consensus 266 -~~vd~VllGAdav~~nG~v-------------vnk~GT~~lAl~A 297 (406)
.++|.+|--|-. ...+.+ +|-.|++.++.++
T Consensus 97 ~g~id~lv~nAg~-~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~ 141 (273)
T 1ae1_A 97 DGKLNILVNNAGV-VIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIA 141 (273)
T ss_dssp TSCCCEEEECCCC-CCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHH
T ss_pred CCCCcEEEECCCC-CCCCChhhCCHHHHHHHHHHhhHHHHHHHHHH
Confidence 457777766532 222221 4677888877665
No 450
>3b8x_A WBDK, pyridoxamine 5-phosphate-dependent dehydrase; aspartate aminotransferase, colitose, perosamine, O-antigen, pyridoxal phosphate,; HET: G4M; 1.70A {Escherichia coli} PDB: 2gms_A* 2gmu_A* 2r0t_A* 3gr9_A*
Probab=31.03 E-value=1.8e+02 Score=27.17 Aligned_cols=101 Identities=12% Similarity=0.183 Sum_probs=53.3
Q ss_pred HhcccCcEEEeccChHHHHHHHHHHH-----HcCCceEEEEecCCCCcchHHHHHHHHhCCCceEEEcch---------H
Q 045642 195 ELIHQNEVILTLGHSKFVKEFLCAAK-----EKKRSFEVFIADGAPKFEGHILAKELDKKGLKAIVITDS---------A 260 (406)
Q Consensus 195 ~~I~~g~~ILT~g~S~tV~~~L~~A~-----~~~~~f~ViV~EsrP~~eG~~~a~~L~~~GI~vt~I~Ds---------a 260 (406)
+++...+.|+|-+.+..+..+|..+. ..++.-+|++. .|.+.+...+ +...|..+..++-. .
T Consensus 45 ~~~~~~~~i~~~sGt~a~~~al~~~~~~~~~~~~~g~~Vi~~--~~~~~~~~~~--~~~~g~~~~~~~~~~~~~~~d~~~ 120 (390)
T 3b8x_A 45 KTFGSKYAVMVSSGSTANLLMIAALFFTKKPRLKKGDEIIVP--AVSWSTTYYP--LQQYGLRVKFVDIDINTLNIDIES 120 (390)
T ss_dssp HHHTCSEEEEESCHHHHHHHHHHHTTSSSSCSCCTTCEEEEE--SSSCHHHHHH--HHHTTCEEEEECBCTTTCSBCHHH
T ss_pred HHHCCCcEEEECCHHHHHHHHHHHHHhhhhcCCCCcCEEEEC--CCCcHHHHHH--HHHcCCEEEEEecCccccCcCHHH
Confidence 34444467777777766665665551 12223356654 4556664333 34578888776421 2
Q ss_pred HHHHhh-cCCEEEEcceeEeeCCCcccccchHHHHHHHhhCCCceEE
Q 045642 261 VFAMIS-RVNMVIVGVHAVMANGGVIAPAGLHVLALAAKKHDVPFVV 306 (406)
Q Consensus 261 v~~~m~-~vd~VllGAdav~~nG~vvnk~GT~~lAl~Ak~~~vPv~V 306 (406)
+-..+. +...|++ .+ ..|. ..--..++-+|+.++++|++
T Consensus 121 l~~~i~~~~~~v~~-~~---~~g~---~~~~~~i~~l~~~~~~~li~ 160 (390)
T 3b8x_A 121 LKEAVTDSTKAILT-VN---LLGN---PNNFDEINKIIGGRDIILLE 160 (390)
T ss_dssp HHHHCCTTEEEEEE-EC---GGGC---CCCHHHHHHHHTTSCCEEEE
T ss_pred HHHHhCcCCeEEEE-EC---CccC---hhhHHHHHHHHHHcCCEEEE
Confidence 222232 2333333 22 1222 23345677788999998876
No 451
>4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus}
Probab=30.93 E-value=58 Score=31.58 Aligned_cols=111 Identities=18% Similarity=0.167 Sum_probs=58.9
Q ss_pred cCcEEEeccChHHHHHHHHHHHHcCCceEEEEecCCCCcc-h-HHHHHHHHh-----------CCCceEEEcc----hHH
Q 045642 199 QNEVILTLGHSKFVKEFLCAAKEKKRSFEVFIADGAPKFE-G-HILAKELDK-----------KGLKAIVITD----SAV 261 (406)
Q Consensus 199 ~g~~ILT~g~S~tV~~~L~~A~~~~~~f~ViV~EsrP~~e-G-~~~a~~L~~-----------~GI~vt~I~D----sav 261 (406)
.+.+||+.|.++.+=..|.... .....+|+++.-++... . ..+.+.|.+ .++.+.. .| ..+
T Consensus 68 ~~~~vlVTGatG~iG~~l~~~L-~~~g~~V~~~~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~-~Dl~d~~~l 145 (427)
T 4f6c_A 68 PLGNTLLTGATGFLGAYLIEAL-QGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIV-GDFECMDDV 145 (427)
T ss_dssp CCEEEEEECTTSHHHHHHHHHH-TTTEEEEEEEEECSSHHHHHHHHHHHHHHHSCHHHHHHHHTTEEEEE-ECC---CCC
T ss_pred CCCEEEEecCCcHHHHHHHHHH-HcCCCEEEEEECCCChHHHHHHHHHHHHHhccccccccccCceEEEe-CCCCCcccC
Confidence 3558999999888877776666 45678899886665522 1 233333322 3333222 22 111
Q ss_pred HHHhhcCCEEEEcceeEeeC-----CCcccccchHHHHHHHhhCCCceEEecCCccc
Q 045642 262 FAMISRVNMVIVGVHAVMAN-----GGVIAPAGLHVLALAAKKHDVPFVVVASTHEL 313 (406)
Q Consensus 262 ~~~m~~vd~VllGAdav~~n-----G~vvnk~GT~~lAl~Ak~~~vPv~V~aes~K~ 313 (406)
. .+.++|.|+--|-.+-.. .--+|-.|+..++-+|+....+ +|...+...
T Consensus 146 ~-~~~~~d~Vih~A~~~~~~~~~~~~~~~Nv~g~~~l~~aa~~~~~~-~v~~SS~~~ 200 (427)
T 4f6c_A 146 V-LPENMDTIIHAGARTDHFGDDDEFEKVNVQGTVDVIRLAQQHHAR-LIYVSTISV 200 (427)
T ss_dssp C-CSSCCSEEEECCCCC-------CHHHHHHHHHHHHHHHHHHTTCE-EEEEEEGGG
T ss_pred C-CcCCCCEEEECCcccCCCCCHHHHHHHHHHHHHHHHHHHHhcCCc-EEEECchHh
Confidence 2 333455544433111000 0013677999999999884444 444444443
No 452
>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*
Probab=30.78 E-value=3.7e+02 Score=25.81 Aligned_cols=99 Identities=16% Similarity=0.146 Sum_probs=65.3
Q ss_pred CcEEEeccChHHHHHHHHHHHHcCCceEEEEecC------CCCcc--------h----HHHHHHHHhC--CCceEEEcc-
Q 045642 200 NEVILTLGHSKFVKEFLCAAKEKKRSFEVFIADG------APKFE--------G----HILAKELDKK--GLKAIVITD- 258 (406)
Q Consensus 200 g~~ILT~g~S~tV~~~L~~A~~~~~~f~ViV~Es------rP~~e--------G----~~~a~~L~~~--GI~vt~I~D- 258 (406)
+..|+..|....=-.+++.....|.. ++.+++. ....+ | ..+++.|.+. +++++.+..
T Consensus 34 ~~~VlIvGaGGlGs~va~~La~aGVg-~ItlvD~D~Ve~SNL~RQ~l~~~~diG~~Ka~aaa~~L~~inP~v~v~~~~~~ 112 (340)
T 3rui_A 34 NTKVLLLGAGTLGCYVSRALIAWGVR-KITFVDNGTVSYSNPVRQALYNFEDCGKPKAELAAASLKRIFPLMDATGVKLS 112 (340)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCC-EEEEECCCBCCTTSTTTSTTCCGGGTTSBHHHHHHHHHHHHCTTCEEEEECCC
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCC-EEEEecCCEeccccccccccCChhhcChHHHHHHHHHHHHhCCCCEEEEEecc
Confidence 56788888877766667666666643 3444433 22211 3 3566777764 566666652
Q ss_pred ------------------hHHHHHhhcCCEEEEcceeEeeCCCcccccchHHHHHHHhhCCCceEEec
Q 045642 259 ------------------SAVFAMISRVNMVIVGVHAVMANGGVIAPAGLHVLALAAKKHDVPFVVVA 308 (406)
Q Consensus 259 ------------------sav~~~m~~vd~VllGAdav~~nG~vvnk~GT~~lAl~Ak~~~vPv~V~a 308 (406)
..+..+++.+|.|+...|..- .-+.+..+|+.+++|++-.+
T Consensus 113 i~~~g~~~~~~~~~~~~~~~l~~~l~~~DlVvd~tDn~~---------tR~lin~~c~~~~~plI~aa 171 (340)
T 3rui_A 113 IPMIGHKLVNEEAQHKDFDRLRALIKEHDIIFLLVDSRE---------SRWLPSLLSNIENKTVINAA 171 (340)
T ss_dssp CCCTTSCCSCHHHHHHHHHHHHHHHHHCSEEEECCSSTG---------GGHHHHHHHHHTTCEEEEEE
T ss_pred ccccCcccchhhhhcCCHHHHHhhhccCCEEEecCCCHH---------HHHHHHHHHHHcCCcEEEee
Confidence 134567789999999887543 23778899999999999754
No 453
>1k68_A Phytochrome response regulator RCPA; phosphorylated aspartate, CHEY homologue, homodimer, (beta/alpha)5, signaling protein; HET: PHD; 1.90A {Tolypothrix SP} SCOP: c.23.1.1
Probab=30.75 E-value=1.7e+02 Score=22.10 Aligned_cols=77 Identities=16% Similarity=0.339 Sum_probs=44.5
Q ss_pred eEEEEecCCCCcchHHHHHHHHhCCC--ceEEEcchH--HHHHh--------hcCCEEEEcceeEeeCCCcccccchHHH
Q 045642 226 FEVFIADGAPKFEGHILAKELDKKGL--KAIVITDSA--VFAMI--------SRVNMVIVGVHAVMANGGVIAPAGLHVL 293 (406)
Q Consensus 226 f~ViV~EsrP~~eG~~~a~~L~~~GI--~vt~I~Dsa--v~~~m--------~~vd~VllGAdav~~nG~vvnk~GT~~l 293 (406)
.+|.++|..|.. ...+...|...|. .|....+.. ...+- ...|.||+..+. . ...|--.+
T Consensus 3 ~~ilivdd~~~~-~~~l~~~L~~~~~~~~v~~~~~~~~a~~~l~~~~~~~~~~~~dlvi~d~~~--~-----~~~g~~~~ 74 (140)
T 1k68_A 3 KKIFLVEDNKAD-IRLIQEALANSTVPHEVVTVRDGMEAMAYLRQEGEYANASRPDLILLXLNL--P-----KKDGREVL 74 (140)
T ss_dssp CEEEEECCCHHH-HHHHHHHHHTCSSCCEEEEECSHHHHHHHHTTCGGGGSCCCCSEEEECSSC--S-----SSCHHHHH
T ss_pred CeEEEEeCCHHH-HHHHHHHHHhcCCCceEEEECCHHHHHHHHHcccccccCCCCcEEEEecCC--C-----cccHHHHH
Confidence 467777766542 2456667777777 566665532 23333 247888886542 2 22344444
Q ss_pred HHHHhh---CCCceEEecCC
Q 045642 294 ALAAKK---HDVPFVVVAST 310 (406)
Q Consensus 294 Al~Ak~---~~vPv~V~aes 310 (406)
..+-+. .++|+++++..
T Consensus 75 ~~l~~~~~~~~~pii~ls~~ 94 (140)
T 1k68_A 75 AEIKSDPTLKRIPVVVLSTS 94 (140)
T ss_dssp HHHHHSTTGGGSCEEEEESC
T ss_pred HHHHcCcccccccEEEEecC
Confidence 444443 46999998764
No 454
>3euc_A Histidinol-phosphate aminotransferase 2; YP_297314.1, structur genomics, joint center for structural genomics, JCSG; HET: MSE; 2.05A {Ralstonia eutropha JMP134} SCOP: c.67.1.0
Probab=30.71 E-value=73 Score=29.64 Aligned_cols=100 Identities=21% Similarity=0.253 Sum_probs=53.2
Q ss_pred CcEEEeccChHHHHHHHHHHHHcCCceEEEEecCCCCcchHHHHHHHHhCCCceEEEc-------c-hHHHHHhh--cCC
Q 045642 200 NEVILTLGHSKFVKEFLCAAKEKKRSFEVFIADGAPKFEGHILAKELDKKGLKAIVIT-------D-SAVFAMIS--RVN 269 (406)
Q Consensus 200 g~~ILT~g~S~tV~~~L~~A~~~~~~f~ViV~EsrP~~eG~~~a~~L~~~GI~vt~I~-------D-sav~~~m~--~vd 269 (406)
..+++|-|.+..+..++....+.| -+|++.+ |.+.+.. ..+...|.++..++ | ..+-..+. +..
T Consensus 86 ~~i~~~~g~t~a~~~~~~~~~~~g--d~Vl~~~--~~~~~~~--~~~~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~~~ 159 (367)
T 3euc_A 86 MEVLLGNGSDEIISMLALAAARPG--AKVMAPV--PGFVMYA--MSAQFAGLEFVGVPLRADFTLDRGAMLAAMAEHQPA 159 (367)
T ss_dssp CEEEEEEHHHHHHHHHHHHTCCTT--CEEEEEE--SCSCCSC--HHHHTTTCEEEEEECCTTSCCCHHHHHHHHHHHCCS
T ss_pred ceEEEcCCHHHHHHHHHHHHcCCC--CEEEEcC--CCHHHHH--HHHHHcCCeEEEecCCCCCCCCHHHHHHHhhccCCC
Confidence 456777776666666666554333 3555543 4444421 22456788888775 2 22333333 566
Q ss_pred EEEEcceeEeeCCCcccccchHHHHHHHhhC--CCceEE
Q 045642 270 MVIVGVHAVMANGGVIAPAGLHVLALAAKKH--DVPFVV 306 (406)
Q Consensus 270 ~VllGAdav~~nG~vvnk~GT~~lAl~Ak~~--~vPv~V 306 (406)
.|++- ..--+.|.++..---..++-.|+.| ++.+++
T Consensus 160 ~v~~~-~~~nptG~~~~~~~l~~i~~~~~~~~~~~~li~ 197 (367)
T 3euc_A 160 IVYLA-YPNNPTGNLFDAADMEAIVRAAQGSVCRSLVVV 197 (367)
T ss_dssp EEEEE-SSCTTTCCCCCHHHHHHHHHHTBTTSCBCEEEE
T ss_pred EEEEc-CCCCCCCCCCCHHHHHHHHHhhhhcCCCcEEEE
Confidence 66652 2222234333333334555668888 888765
No 455
>1qv9_A F420-dependent methylenetetrahydromethanopterin dehydrogenase; monomer: alpha/beta domain, helix bundle, trimer of dimers, oxidoreductase; HET: MSE; 1.54A {Methanopyrus kandleri} SCOP: c.127.1.1 PDB: 1u6i_A 1u6j_A 1u6k_A* 3iqe_A* 3iqf_A* 3iqz_A*
Probab=30.66 E-value=97 Score=28.70 Aligned_cols=40 Identities=25% Similarity=0.360 Sum_probs=28.0
Q ss_pred HHcCCceEEEEecCCCCcchHHHHHH-HHhCCCceEEEcchH
Q 045642 220 KEKKRSFEVFIADGAPKFEGHILAKE-LDKKGLKAIVITDSA 260 (406)
Q Consensus 220 ~~~~~~f~ViV~EsrP~~eG~~~a~~-L~~~GI~vt~I~Dsa 260 (406)
.+.+..|.|++ --.|..-|-.-|++ |++.||||.+|.|+-
T Consensus 61 ~~~~pDfvI~i-sPN~a~PGP~~ARE~l~~~~iP~IvI~D~p 101 (283)
T 1qv9_A 61 EDFEPDFIVYG-GPNPAAPGPSKAREMLADSEYPAVIIGDAP 101 (283)
T ss_dssp HHHCCSEEEEE-CSCTTSHHHHHHHHHHHTSSSCEEEEEEGG
T ss_pred hhcCCCEEEEE-CCCCCCCCchHHHHHHHhCCCCEEEEcCCc
Confidence 44467775554 34556778766665 567999999999974
No 456
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=30.46 E-value=47 Score=32.19 Aligned_cols=65 Identities=8% Similarity=0.092 Sum_probs=46.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcccCcEEEeccChHHHHHHHHHHHHcCCceEEEEecCCCCcchH
Q 045642 175 VNELIEDINTCREGIAEQAMELIHQNEVILTLGHSKFVKEFLCAAKEKKRSFEVFIADGAPKFEGH 240 (406)
Q Consensus 175 i~~~~~e~~~~~~~I~~~a~~~I~~g~~ILT~g~S~tV~~~L~~A~~~~~~f~ViV~EsrP~~eG~ 240 (406)
...|.+.+....+.+.+...++-..|..|..||.+..-..+|..+. .+..+-++++|..|..+|+
T Consensus 294 y~~f~~~~~~~~~~l~~~l~~~k~~gk~v~~yGa~~~g~~l~~~~~-~~~~~i~~~~D~~~~k~g~ 358 (416)
T 4e2x_A 294 LRAFAGNVVKIRDELTALLHRLRAEGRSVVGYGATAKSATVTNFCG-IGPDLVHSVYDTTPDKQNR 358 (416)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEECCCSHHHHHHHHHT-CCTTTSCCEEESCGGGTTE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCeEEEEccccHHHHHHHhcC-CCcceeeEEEeCCccccCc
Confidence 3556666666666666665555668899999998876666666665 4545566789999999995
No 457
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=30.40 E-value=75 Score=28.50 Aligned_cols=94 Identities=14% Similarity=0.213 Sum_probs=43.4
Q ss_pred cEEEeccChHHHHHHHHHHHHcCCceEEEEecCCCCcchHHHHHHHHhCCCceEEEcchHHHHHhhcCCEEEEcceeEee
Q 045642 201 EVILTLGHSKFVKEFLCAAKEKKRSFEVFIADGAPKFEGHILAKELDKKGLKAIVITDSAVFAMISRVNMVIVGVHAVMA 280 (406)
Q Consensus 201 ~~ILT~g~S~tV~~~L~~A~~~~~~f~ViV~EsrP~~eG~~~a~~L~~~GI~vt~I~Dsav~~~m~~vd~VllGAdav~~ 280 (406)
.+||..|. ..+=..|..+. ..+.++|+++.-++.. +..|...|+.+...--..+. +.++|.||--
T Consensus 6 ~~ilVtGa-G~iG~~l~~~L-~~~g~~V~~~~r~~~~-----~~~~~~~~~~~~~~D~~d~~--~~~~d~vi~~------ 70 (286)
T 3ius_A 6 GTLLSFGH-GYTARVLSRAL-APQGWRIIGTSRNPDQ-----MEAIRASGAEPLLWPGEEPS--LDGVTHLLIS------ 70 (286)
T ss_dssp CEEEEETC-CHHHHHHHHHH-GGGTCEEEEEESCGGG-----HHHHHHTTEEEEESSSSCCC--CTTCCEEEEC------
T ss_pred CcEEEECC-cHHHHHHHHHH-HHCCCEEEEEEcChhh-----hhhHhhCCCeEEEecccccc--cCCCCEEEEC------
Confidence 35666675 55555444443 1224566666544321 23344455443332111111 4455555543
Q ss_pred CCCccc--ccchHHHHHHHhh--CCCceEEecCC
Q 045642 281 NGGVIA--PAGLHVLALAAKK--HDVPFVVVAST 310 (406)
Q Consensus 281 nG~vvn--k~GT~~lAl~Ak~--~~vPv~V~aes 310 (406)
.+... .-.+..+.-+|+. .+++-+|.+.+
T Consensus 71 -a~~~~~~~~~~~~l~~a~~~~~~~~~~~v~~Ss 103 (286)
T 3ius_A 71 -TAPDSGGDPVLAALGDQIAARAAQFRWVGYLST 103 (286)
T ss_dssp -CCCBTTBCHHHHHHHHHHHHTGGGCSEEEEEEE
T ss_pred -CCccccccHHHHHHHHHHHhhcCCceEEEEeec
Confidence 33322 2234556666666 67665655444
No 458
>1meo_A Phosophoribosylglycinamide formyltransferase; purine biosynthesis; 1.72A {Homo sapiens} SCOP: c.65.1.1 PDB: 1njs_A* 1rbm_A* 1rbq_A* 1rby_A* 1rbz_A* 1rc0_A* 1rc1_A* 1zly_A* 1zlx_A* 1mej_B 1men_A*
Probab=30.13 E-value=1.4e+02 Score=26.48 Aligned_cols=70 Identities=17% Similarity=0.268 Sum_probs=39.8
Q ss_pred EEEeccChHHHHHHHHHHHHcCC-ceEEEEec-CCCCcchHHHHHHHHhCCCceEEEcc----------hHHHHHhh--c
Q 045642 202 VILTLGHSKFVKEFLCAAKEKKR-SFEVFIAD-GAPKFEGHILAKELDKKGLKAIVITD----------SAVFAMIS--R 267 (406)
Q Consensus 202 ~ILT~g~S~tV~~~L~~A~~~~~-~f~ViV~E-srP~~eG~~~a~~L~~~GI~vt~I~D----------sav~~~m~--~ 267 (406)
.||.-|..+.++.++.... ++. .++|..+- .+|...|+..| .+.||++.++.. ..+...++ +
T Consensus 4 aVl~SG~Gs~L~aLi~~~~-~~~~~~~I~~Vvs~~~~~~~~~~A---~~~gIp~~~~~~~~~~~r~~~~~~~~~~l~~~~ 79 (209)
T 1meo_A 4 AVLISGTGSNLQALIDSTR-EPNSSAQIDIVISNKAAVAGLDKA---ERAGIPTRVINHKLYKNRVEFDSAIDLVLEEFS 79 (209)
T ss_dssp EEEESSSCTTHHHHHHHHH-STTCSCEEEEEEESSTTCHHHHHH---HHTTCCEEECCGGGSSSHHHHHHHHHHHHHHTT
T ss_pred EEEEECCchHHHHHHHHHh-cCCCCcEEEEEEeCCCChHHHHHH---HHcCCCEEEECccccCchhhhhHHHHHHHHhcC
Confidence 3565566666666655444 543 46665444 34455665434 568999987642 33444444 4
Q ss_pred CCEEEEcc
Q 045642 268 VNMVIVGV 275 (406)
Q Consensus 268 vd~VllGA 275 (406)
+|.+++.+
T Consensus 80 ~Dliv~a~ 87 (209)
T 1meo_A 80 IDIVCLAG 87 (209)
T ss_dssp CCEEEEES
T ss_pred CCEEEEcc
Confidence 67776644
No 459
>2gkg_A Response regulator homolog; social motility, receiver domain, signalling, high resolutio signaling protein; 1.00A {Myxococcus xanthus} PDB: 2i6f_A 2nt4_A 2nt3_A
Probab=30.11 E-value=1.2e+02 Score=22.61 Aligned_cols=75 Identities=20% Similarity=0.337 Sum_probs=43.6
Q ss_pred eEEEEecCCCCcchHHHHHHHHhCCCceEEEcchHHHH-Hhh--cCCEEEEcceeEeeCCCcccccchHHHHHHHhh---
Q 045642 226 FEVFIADGAPKFEGHILAKELDKKGLKAIVITDSAVFA-MIS--RVNMVIVGVHAVMANGGVIAPAGLHVLALAAKK--- 299 (406)
Q Consensus 226 f~ViV~EsrP~~eG~~~a~~L~~~GI~vt~I~Dsav~~-~m~--~vd~VllGAdav~~nG~vvnk~GT~~lAl~Ak~--- 299 (406)
.+|.++|..|. ....+...|.+.|+.|....+..-+. .+. ..|.||+..+- .+ ..-|-..+..+-+.
T Consensus 6 ~~ilivdd~~~-~~~~l~~~L~~~g~~v~~~~~~~~a~~~~~~~~~dlvi~d~~~--~~----~~~g~~~~~~l~~~~~~ 78 (127)
T 2gkg_A 6 KKILIVESDTA-LSATLRSALEGRGFTVDETTDGKGSVEQIRRDRPDLVVLAVDL--SA----GQNGYLICGKLKKDDDL 78 (127)
T ss_dssp CEEEEECSCHH-HHHHHHHHHHHHTCEEEEECCHHHHHHHHHHHCCSEEEEESBC--GG----GCBHHHHHHHHHHSTTT
T ss_pred CeEEEEeCCHH-HHHHHHHHHHhcCceEEEecCHHHHHHHHHhcCCCEEEEeCCC--CC----CCCHHHHHHHHhcCccc
Confidence 46778877653 23456667777788887666643322 222 47888886542 10 12344444444443
Q ss_pred CCCceEEe
Q 045642 300 HDVPFVVV 307 (406)
Q Consensus 300 ~~vPv~V~ 307 (406)
.++|++++
T Consensus 79 ~~~~ii~~ 86 (127)
T 2gkg_A 79 KNVPIVII 86 (127)
T ss_dssp TTSCEEEE
T ss_pred cCCCEEEE
Confidence 57999988
No 460
>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D
Probab=30.09 E-value=1e+02 Score=28.29 Aligned_cols=52 Identities=15% Similarity=0.134 Sum_probs=33.7
Q ss_pred cccCcEEEeccChHHHHH-HHHHHHHcCCceEEEEecCCCCcchHHHHHHHHhCCCceEE
Q 045642 197 IHQNEVILTLGHSKFVKE-FLCAAKEKKRSFEVFIADGAPKFEGHILAKELDKKGLKAIV 255 (406)
Q Consensus 197 I~~g~~ILT~g~S~tV~~-~L~~A~~~~~~f~ViV~EsrP~~eG~~~a~~L~~~GI~vt~ 255 (406)
+..|++||.+|.++.+=. .++.|+..| .+|+++++.+.. ..++ .+.|.+.++
T Consensus 123 ~~~g~~vlV~Ga~G~vG~~~~~~a~~~G--a~Vi~~~~~~~~--~~~~---~~~ga~~~~ 175 (302)
T 1iz0_A 123 ARPGEKVLVQAAAGALGTAAVQVARAMG--LRVLAAASRPEK--LALP---LALGAEEAA 175 (302)
T ss_dssp CCTTCEEEESSTTBHHHHHHHHHHHHTT--CEEEEEESSGGG--SHHH---HHTTCSEEE
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCC--CEEEEEeCCHHH--HHHH---HhcCCCEEE
Confidence 788999999998655544 445555444 489998876543 2333 346766544
No 461
>3av3_A Phosphoribosylglycinamide formyltransferase; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; HET: MSE; 1.70A {Geobacillus kaustophilus}
Probab=30.04 E-value=1.9e+02 Score=25.68 Aligned_cols=53 Identities=15% Similarity=0.117 Sum_probs=31.0
Q ss_pred EEEeccChHHHHHHHHHHHHcCCceEEEEecC-CCCcchHHHHHHHHhCCCceEEEc
Q 045642 202 VILTLGHSKFVKEFLCAAKEKKRSFEVFIADG-APKFEGHILAKELDKKGLKAIVIT 257 (406)
Q Consensus 202 ~ILT~g~S~tV~~~L~~A~~~~~~f~ViV~Es-rP~~eG~~~a~~L~~~GI~vt~I~ 257 (406)
.|+..|..+....+|....+..-.++|..+-| +|...+... ..+.||++..+.
T Consensus 7 ~vl~sG~g~~~~~~l~~l~~~~l~~~I~~Vit~~~~~~v~~~---A~~~gIp~~~~~ 60 (212)
T 3av3_A 7 AVFASGSGTNFQAIVDAAKRGDLPARVALLVCDRPGAKVIER---AARENVPAFVFS 60 (212)
T ss_dssp EEECCSSCHHHHHHHHHHHTTCCCEEEEEEEESSTTCHHHHH---HHHTTCCEEECC
T ss_pred EEEEECCcHHHHHHHHHHHhCCCCCeEEEEEeCCCCcHHHHH---HHHcCCCEEEeC
Confidence 35666777777777776663322456543333 355444333 356899998764
No 462
>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0
Probab=29.99 E-value=1.4e+02 Score=26.54 Aligned_cols=108 Identities=7% Similarity=0.083 Sum_probs=62.6
Q ss_pred CcEEEeccChHHHHHHHHHHHHcCCceEEEEecCCCCcchHHHHHHHHhCCCceEEE-cc----hHHHHHhh-------c
Q 045642 200 NEVILTLGHSKFVKEFLCAAKEKKRSFEVFIADGAPKFEGHILAKELDKKGLKAIVI-TD----SAVFAMIS-------R 267 (406)
Q Consensus 200 g~~ILT~g~S~tV~~~L~~A~~~~~~f~ViV~EsrP~~eG~~~a~~L~~~GI~vt~I-~D----sav~~~m~-------~ 267 (406)
+.++|+.|.++.+=..+..... .+..+|+++..++......+.+.+.+.|-.+.++ .| ..+..++. +
T Consensus 7 ~k~vlVTGas~gIG~~~a~~l~-~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~ 85 (264)
T 3i4f_A 7 VRHALITAGTKGLGKQVTEKLL-AKGYSVTVTYHSDTTAMETMKETYKDVEERLQFVQADVTKKEDLHKIVEEAMSHFGK 85 (264)
T ss_dssp CCEEEETTTTSHHHHHHHHHHH-HTTCEEEEEESSCHHHHHHHHHHTGGGGGGEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred cCEEEEeCCCchhHHHHHHHHH-HCCCEEEEEcCCChHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhCC
Confidence 5678888888877666544432 2346788876665444445555666656666554 33 23444443 6
Q ss_pred CCEEEEccee-EeeCCCc-------------ccccchHHHHHHH----hhCCCceEEec
Q 045642 268 VNMVIVGVHA-VMANGGV-------------IAPAGLHVLALAA----KKHDVPFVVVA 308 (406)
Q Consensus 268 vd~VllGAda-v~~nG~v-------------vnk~GT~~lAl~A----k~~~vPv~V~a 308 (406)
+|.||-.|-. +...+.+ +|-.|+..++.++ +..+...+|..
T Consensus 86 id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~i 144 (264)
T 3i4f_A 86 IDFLINNAGPYVFERKKLVDYEEDEWNEMIQGNLTAVFHLLKLVVPVMRKQNFGRIINY 144 (264)
T ss_dssp CCEEECCCCCCCCSCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEE
T ss_pred CCEEEECCcccccCCCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCeEEEE
Confidence 7888776642 2222221 4667888888776 44555555543
No 463
>3t18_A Aminotransferase class I and II; PSI-biology, MCSG, midwest center for structural genomics, P 5'-phosphate binding; HET: PLP; 2.86A {Anaerococcus prevotii} PDB: 4emy_A*
Probab=29.92 E-value=3.3e+02 Score=25.56 Aligned_cols=100 Identities=9% Similarity=0.003 Sum_probs=54.4
Q ss_pred cEEEeccChHHHHHHHHHHHHcCCceEEEEecCCCCcchHHHHHHHHhCCCceEEEcc--h-------HHHHHhh-----
Q 045642 201 EVILTLGHSKFVKEFLCAAKEKKRSFEVFIADGAPKFEGHILAKELDKKGLKAIVITD--S-------AVFAMIS----- 266 (406)
Q Consensus 201 ~~ILT~g~S~tV~~~L~~A~~~~~~f~ViV~EsrP~~eG~~~a~~L~~~GI~vt~I~D--s-------av~~~m~----- 266 (406)
.+++|.|.+..+..++....+.| -+|++.+ |.+.+... .+...|.++..++- . .+-..+.
T Consensus 103 ~i~~t~g~~~al~~~~~~~~~~g--d~Vl~~~--p~~~~~~~--~~~~~g~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~ 176 (413)
T 3t18_A 103 SAIATPGGTGAIRSAIFSYLDEG--DPLICHD--YYWAPYRK--ICEEFGRNFKTFEFFTDDFAFNIDVYKEAIDEGIRD 176 (413)
T ss_dssp EEEEESHHHHHHHHHHHHHCCSS--CEEEEES--SCCTHHHH--HHHHHTCEEEEECCBCTTSSBCHHHHHHHHHHHHHH
T ss_pred cEEEcCccHHHHHHHHHHhcCCC--CEEEECC--CCcccHHH--HHHHhCCeEEEeeccCCCCCcCHHHHHHHHHHHhhc
Confidence 57777777777776666554333 3566554 66666432 23446887777752 1 2333333
Q ss_pred cCCEEEEccee-EeeCCCcccccchHHHHHHHh------hCCCceEE
Q 045642 267 RVNMVIVGVHA-VMANGGVIAPAGLHVLALAAK------KHDVPFVV 306 (406)
Q Consensus 267 ~vd~VllGAda-v~~nG~vvnk~GT~~lAl~Ak------~~~vPv~V 306 (406)
+..++++-..- --+.|.+...---..++-.|+ .+++.+++
T Consensus 177 ~~~~~vi~~~p~~NPtG~~~~~~~l~~l~~~~~~~~~~~~~~~~li~ 223 (413)
T 3t18_A 177 SDRIASLINSPGNNPTGYSLSDEEWDEVITFLKEKAEDKDKKITLIV 223 (413)
T ss_dssp CSEEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHTTSTTCEEEEEE
T ss_pred CCCEEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHHhhccCCcEEEEE
Confidence 33323332211 133455555544455666666 78877665
No 464
>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}
Probab=29.84 E-value=2e+02 Score=25.41 Aligned_cols=97 Identities=13% Similarity=0.157 Sum_probs=54.0
Q ss_pred CcEEEeccChHHHHHHHHHH-HHcCCceEEEEecCCCCcc-hHHHHHHHHhCCCceEEE-cc----hHHHHHhh------
Q 045642 200 NEVILTLGHSKFVKEFLCAA-KEKKRSFEVFIADGAPKFE-GHILAKELDKKGLKAIVI-TD----SAVFAMIS------ 266 (406)
Q Consensus 200 g~~ILT~g~S~tV~~~L~~A-~~~~~~f~ViV~EsrP~~e-G~~~a~~L~~~GI~vt~I-~D----sav~~~m~------ 266 (406)
|.++|+.|.|+.+=..+... .++| .+|+++...+..+ ...++++|.+.|-.+.++ .| .++..++.
T Consensus 2 ~k~vlVTGas~gIG~~ia~~l~~~G--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 79 (258)
T 3a28_C 2 SKVAMVTGGAQGIGRGISEKLAADG--FDIAVADLPQQEEQAAETIKLIEAADQKAVFVGLDVTDKANFDSAIDEAAEKL 79 (258)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHT--CEEEEEECGGGHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCC--CEEEEEeCCcchHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHh
Confidence 45777778877666555443 3344 5677775444321 446677777767666554 33 23334443
Q ss_pred -cCCEEEEcceeEeeCCCc-------------ccccchHHHHHHHhh
Q 045642 267 -RVNMVIVGVHAVMANGGV-------------IAPAGLHVLALAAKK 299 (406)
Q Consensus 267 -~vd~VllGAdav~~nG~v-------------vnk~GT~~lAl~Ak~ 299 (406)
++|.+|--|- +...+.+ +|-.|++.++.++..
T Consensus 80 g~iD~lv~nAg-~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~ 125 (258)
T 3a28_C 80 GGFDVLVNNAG-IAQIKPLLEVTEEDLKQIYSVNVFSVFFGIQAASR 125 (258)
T ss_dssp TCCCEEEECCC-CCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred CCCCEEEECCC-CCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHH
Confidence 6787776553 2222222 345677776655543
No 465
>3fg9_A Protein of universal stress protein USPA family; APC60691, nucleotide- binding, lactobacillus plantarum WCFS1, structural genomics PSI-2; 1.47A {Lactobacillus plantarum}
Probab=29.83 E-value=2.1e+02 Score=22.77 Aligned_cols=102 Identities=13% Similarity=0.129 Sum_probs=55.3
Q ss_pred EEEe-cc--ChHHHHHHHHHHHH----cCCceEEE-EecCCCCc---------------chH----HHHHHHHhCCCc-e
Q 045642 202 VILT-LG--HSKFVKEFLCAAKE----KKRSFEVF-IADGAPKF---------------EGH----ILAKELDKKGLK-A 253 (406)
Q Consensus 202 ~ILT-~g--~S~tV~~~L~~A~~----~~~~f~Vi-V~EsrP~~---------------eG~----~~a~~L~~~GI~-v 253 (406)
.||. +. .|..-.+.|..|.+ .+..+.++ |.+..+.. ++. .+.+.+.+.|++ +
T Consensus 17 ~ILv~vD~~~s~~s~~al~~a~~la~~~~a~l~ll~v~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~g~~~~ 96 (156)
T 3fg9_A 17 RILLTVDEDDNTSSERAFRYATTLAHDYDVPLGICSVLESEDINIFDSLTPSKIQAKRKHVEDVVAEYVQLAEQRGVNQV 96 (156)
T ss_dssp -EEEECCSCCCHHHHHHHHHHHHHHHHHTCCEEEEEEECCCCTTCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHTCSSE
T ss_pred eEEEEECCCCCHHHHHHHHHHHHHHHhcCCEEEEEEEEeCCCccccccCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCce
Confidence 3444 66 77766666655543 45666654 55544321 121 223345567884 4
Q ss_pred EE--Ec-ch---HHHHH-h--hcCCEEEEcceeEeeCCCcccccchHHHHHHHhhCCCceEEe
Q 045642 254 IV--IT-DS---AVFAM-I--SRVNMVIVGVHAVMANGGVIAPAGLHVLALAAKKHDVPFVVV 307 (406)
Q Consensus 254 t~--I~-Ds---av~~~-m--~~vd~VllGAdav~~nG~vvnk~GT~~lAl~Ak~~~vPv~V~ 307 (406)
.. .. .. .+..+ . .++|.+++|++.- |++---.|+..-.+ .++..+||+|+
T Consensus 97 ~~~v~~~g~~~~~I~~~~a~~~~~DlIV~G~~g~---~~~~~~~Gs~~~~v-l~~a~~PVlvV 155 (156)
T 3fg9_A 97 EPLVYEGGDVDDVILEQVIPEFKPDLLVTGADTE---FPHSKIAGAIGPRL-ARKAPISVIVV 155 (156)
T ss_dssp EEEEEECSCHHHHHHHTHHHHHCCSEEEEETTCC---CTTSSSCSCHHHHH-HHHCSSEEEEE
T ss_pred EEEEEeCCCHHHHHHHHHHHhcCCCEEEECCCCC---CccceeecchHHHH-HHhCCCCEEEe
Confidence 32 23 22 22222 1 3589999999862 23322467765444 56778999986
No 466
>3mw8_A Uroporphyrinogen-III synthase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, lyase; 1.65A {Shewanella amazonensis}
Probab=29.70 E-value=1.1e+02 Score=27.13 Aligned_cols=53 Identities=13% Similarity=0.115 Sum_probs=34.3
Q ss_pred cCcEEEeccChHHHHHHHHHHHHcCCceEEEEecCCCCcchHHHHHHHHhCCCceEEEcch
Q 045642 199 QNEVILTLGHSKFVKEFLCAAKEKKRSFEVFIADGAPKFEGHILAKELDKKGLKAIVITDS 259 (406)
Q Consensus 199 ~g~~ILT~g~S~tV~~~L~~A~~~~~~f~ViV~EsrP~~eG~~~a~~L~~~GI~vt~I~Ds 259 (406)
+.|.|+ +-....|..++..+.+.-++.+++++ |..+|+.|.+.|+.+.++++.
T Consensus 50 ~~d~vi-ftS~~aV~~~~~~l~~~l~~~~~~aV-------G~~Ta~~L~~~G~~~~~~p~~ 102 (240)
T 3mw8_A 50 RADILI-FISTSAVSFATPWLKDQWPKATYYAV-------GDATADALALQGITAERSPAD 102 (240)
T ss_dssp TCSEEE-ECSHHHHHHHHHHHTTCCCSSEEEES-------SHHHHHHHHHTTCCCEECC--
T ss_pred CCCEEE-EECHHHHHHHHHHHHhhCcCCeEEEE-------CHHHHHHHHHcCCCCccCCCC
Confidence 445444 44455777777665421123455554 899999999999999988864
No 467
>2aeu_A Hypothetical protein MJ0158; selenocysteine synthase, PLP, pyridoxal phosphate, HOMO- oligomerization, unknown function; 1.70A {Methanocaldococcus jannaschii} SCOP: c.67.1.8 PDB: 2aev_A*
Probab=29.67 E-value=2.8e+02 Score=25.99 Aligned_cols=101 Identities=12% Similarity=0.086 Sum_probs=52.3
Q ss_pred HHhccc---CcEEEeccChHHHHHHHHHHHHcCCceEEEEecCCCCcch-HHHHHHHHhCCCceEEEcchHH-HHHhhcC
Q 045642 194 MELIHQ---NEVILTLGHSKFVKEFLCAAKEKKRSFEVFIADGAPKFEG-HILAKELDKKGLKAIVITDSAV-FAMISRV 268 (406)
Q Consensus 194 ~~~I~~---g~~ILT~g~S~tV~~~L~~A~~~~~~f~ViV~EsrP~~eG-~~~a~~L~~~GI~vt~I~Dsav-~~~m~~v 268 (406)
++++.. .++++|.|.+..+..++..+ .| -+|++.+ |.+.| ..+...+...|+++..+.|-.. -..-+++
T Consensus 68 a~~~g~~~~~~~~~~~ggt~a~~~~~~~~--~g--d~Vl~~~--~~y~~~~~~~~~~~~~g~~~~~v~d~~~l~~~~~~~ 141 (374)
T 2aeu_A 68 LKHLGGDENDKCVGFNRTSSAILATILAL--KP--KKVIHYL--PELPGHPSIERSCKIVNAKYFESDKVGEILNKIDKD 141 (374)
T ss_dssp HHHHTCCTTEEEEEESSHHHHHHHHHHHH--CC--SEEEEEC--SSSSCCTHHHHHHHHTTCEEEEESCHHHHHTTCCTT
T ss_pred HHHhCCCCcceEEEEcChHHHHHHHHHhC--CC--CEEEEec--CCCCccHHHHHHHHHcCcEEEEeCCHHHHHhcCCCc
Confidence 344543 45677766666666666644 44 3566554 33333 2222345667998887744221 1111122
Q ss_pred CE-EEEcceeEeeCCCcccccc-----hHHHHHHHhhCCCceEEec
Q 045642 269 NM-VIVGVHAVMANGGVIAPAG-----LHVLALAAKKHDVPFVVVA 308 (406)
Q Consensus 269 d~-VllGAdav~~nG~vvnk~G-----T~~lAl~Ak~~~vPv~V~a 308 (406)
.. |++ + ..-|..| -..++-+|+++++++++=.
T Consensus 142 ~~~v~~-------~-~p~nptG~~~~~l~~i~~l~~~~~~~li~De 179 (374)
T 2aeu_A 142 TLVIIT-------G-STMDLKVIELENFKKVINTAKNKEAIVFVDD 179 (374)
T ss_dssp EEEEEE-------C-BCTTSCBCCHHHHHHHHHHHHHHTCCEEEEC
T ss_pred cEEEEE-------c-cCCCCCCCCcccHHHHHHHHHHcCCEEEEEC
Confidence 22 222 1 2335555 2345667888999888743
No 468
>1o69_A Aminotransferase; structural genomics, unknown function; HET: X04; 1.84A {Campylobacter jejuni} SCOP: c.67.1.4 PDB: 1o62_A 1o61_A*
Probab=29.65 E-value=2.5e+02 Score=26.41 Aligned_cols=97 Identities=12% Similarity=0.107 Sum_probs=52.8
Q ss_pred cccCcEEEeccChHHHHHHHHHH-HHcCCceEEEEecCCCCcchHHHHHHHHhCCCceEEEcc--------hHHHHHhh-
Q 045642 197 IHQNEVILTLGHSKFVKEFLCAA-KEKKRSFEVFIADGAPKFEGHILAKELDKKGLKAIVITD--------SAVFAMIS- 266 (406)
Q Consensus 197 I~~g~~ILT~g~S~tV~~~L~~A-~~~~~~f~ViV~EsrP~~eG~~~a~~L~~~GI~vt~I~D--------sav~~~m~- 266 (406)
+....+++|-|.+..+..++..+ ...| -+|++. .|.+.+...+ +...|+++..++- ..+-..+.
T Consensus 45 ~~~~~v~~~~ggt~al~~~~~~l~~~~g--d~Vl~~--~~~~~~~~~~--~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~ 118 (394)
T 1o69_A 45 SKSENALALNSATAALHLALRVAGVKQD--DIVLAS--SFTFIASVAP--ICYLKAKPVFIDCDETYNIDVDLLKLAIKE 118 (394)
T ss_dssp HCCSEEEEESCHHHHHHHHHHHTTCCTT--CEEEEE--SSSCGGGTHH--HHHTTCEEEEECBCTTSSBCHHHHHHHHHH
T ss_pred hCCCcEEEeCCHHHHHHHHHHHcCCCCC--CEEEEC--CCccHHHHHH--HHHcCCEEEEEEeCCCCCcCHHHHHHHHhc
Confidence 33345777777666666666655 3223 356655 3555553222 2337888887752 13333343
Q ss_pred ---cCCEEEEcceeEeeCCCcccccchHHHHHHHhhCCCceEE
Q 045642 267 ---RVNMVIVGVHAVMANGGVIAPAGLHVLALAAKKHDVPFVV 306 (406)
Q Consensus 267 ---~vd~VllGAdav~~nG~vvnk~GT~~lAl~Ak~~~vPv~V 306 (406)
++..|++-. ..|. ..--..++-+|+.+++++++
T Consensus 119 ~~~~~~~v~~~~----~~G~---~~~l~~i~~l~~~~~~~li~ 154 (394)
T 1o69_A 119 CEKKPKALILTH----LYGN---AAKMDEIVEICKENDIVLIE 154 (394)
T ss_dssp CSSCCCEEEEEC----GGGC---CCCHHHHHHHHHHTTCEEEE
T ss_pred ccCCceEEEEEC----CCCC---hhhHHHHHHHHHHcCCEEEE
Confidence 355555532 2331 22234677788899988876
No 469
>2fz5_A Flavodoxin; alpha/beta doubly-wound topology, non-covalently bound FMN, electron transport; HET: FNR; NMR {Megasphaera elsdenii} SCOP: c.23.5.1
Probab=29.62 E-value=96 Score=24.39 Aligned_cols=64 Identities=11% Similarity=0.135 Sum_probs=35.5
Q ss_pred HHHHHhCCCceEEEcchHH-HHHhhcCCEEEEcceeEeeCCCcccc--cchHHHHHHHhhCCCceEEec
Q 045642 243 AKELDKKGLKAIVITDSAV-FAMISRVNMVIVGVHAVMANGGVIAP--AGLHVLALAAKKHDVPFVVVA 308 (406)
Q Consensus 243 a~~L~~~GI~vt~I~Dsav-~~~m~~vd~VllGAdav~~nG~vvnk--~GT~~lAl~Ak~~~vPv~V~a 308 (406)
++.|.+.|+++.++.-... ..-+...|.|++|+-. + +|+.... +-...=-+.....++|+.+++
T Consensus 21 ~~~l~~~g~~v~~~~~~~~~~~~l~~~d~vi~g~p~-y-~~~~~~~~~~~~fl~~l~~~l~~k~~~~~~ 87 (137)
T 2fz5_A 21 EAAVKAAGADVESVRFEDTNVDDVASKDVILLGCPA-M-GSEELEDSVVEPFFTDLAPKLKGKKVGLFG 87 (137)
T ss_dssp HHHHHHTTCCEEEEETTSCCHHHHHTCSEEEEECCC-B-TTTBCCHHHHHHHHHHHGGGCSSCEEEEEE
T ss_pred HHHHHhCCCeEEEEEcccCCHHHHhcCCEEEEEccc-c-CCCCCCHHHHHHHHHHhhhhcCCCEEEEEE
Confidence 3444556777776642221 2346789999999754 3 3444433 222222222233689988876
No 470
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=29.58 E-value=67 Score=29.28 Aligned_cols=96 Identities=10% Similarity=0.086 Sum_probs=58.0
Q ss_pred cCcEEEeccChHHHHHHHHHH-HHcCCceEEEEecCCCCcchHHHHHHHHhCCCceEEE-cc----hHHHHHhh------
Q 045642 199 QNEVILTLGHSKFVKEFLCAA-KEKKRSFEVFIADGAPKFEGHILAKELDKKGLKAIVI-TD----SAVFAMIS------ 266 (406)
Q Consensus 199 ~g~~ILT~g~S~tV~~~L~~A-~~~~~~f~ViV~EsrP~~eG~~~a~~L~~~GI~vt~I-~D----sav~~~m~------ 266 (406)
.|.++|+.|.|+-+=..+... .++| .+|+++... ......++++|.+.|.++..+ .| .++..++.
T Consensus 23 ~~k~~lVTGas~GIG~aia~~la~~G--~~V~~~~r~-~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 99 (279)
T 3sju_A 23 RPQTAFVTGVSSGIGLAVARTLAARG--IAVYGCARD-AKNVSAAVDGLRAAGHDVDGSSCDVTSTDEVHAAVAAAVERF 99 (279)
T ss_dssp --CEEEEESTTSHHHHHHHHHHHHTT--CEEEEEESC-HHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCC--CEEEEEeCC-HHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHc
Confidence 567888888888776655443 3344 567777543 233456788888888777665 33 23333333
Q ss_pred -cCCEEEEcceeEeeCCCc-------------ccccchHHHHHHHh
Q 045642 267 -RVNMVIVGVHAVMANGGV-------------IAPAGLHVLALAAK 298 (406)
Q Consensus 267 -~vd~VllGAdav~~nG~v-------------vnk~GT~~lAl~Ak 298 (406)
++|.+|--|- +...+.+ +|-.|++.++.++.
T Consensus 100 g~id~lv~nAg-~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~ 144 (279)
T 3sju_A 100 GPIGILVNSAG-RNGGGETADLDDALWADVLDTNLTGVFRVTREVL 144 (279)
T ss_dssp CSCCEEEECCC-CCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHH
T ss_pred CCCcEEEECCC-CCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHh
Confidence 5788777663 3333332 57788888877653
No 471
>1fg7_A Histidinol phosphate aminotransferase; HISC, histidine biosynthesis, pyridoxal PH montreal-kingston bacterial structural genomics initiative; HET: PMP; 1.50A {Escherichia coli} SCOP: c.67.1.1 PDB: 1fg3_A* 1gew_A* 1gex_A* 1gey_A* 1iji_A*
Probab=29.32 E-value=1.4e+02 Score=27.73 Aligned_cols=54 Identities=11% Similarity=0.227 Sum_probs=31.9
Q ss_pred cCcEEEeccChHHHHHHHHHHHHcCCceEEEEecCCCCcchHHHHHHHHhCCCceEEEc
Q 045642 199 QNEVILTLGHSKFVKEFLCAAKEKKRSFEVFIADGAPKFEGHILAKELDKKGLKAIVIT 257 (406)
Q Consensus 199 ~g~~ILT~g~S~tV~~~L~~A~~~~~~f~ViV~EsrP~~eG~~~a~~L~~~GI~vt~I~ 257 (406)
...+++|.|.+..+..++....+.|+ -+|++. .|.+.+...+ +...|.++..++
T Consensus 75 ~~~v~~~~G~~~ai~~~~~~~~~~g~-d~Vl~~--~p~~~~~~~~--~~~~g~~~~~v~ 128 (356)
T 1fg7_A 75 PEQVLVSRGADEGIELLIRAFCEPGK-DAILYC--PPTYGMYSVS--AETIGVECRTVP 128 (356)
T ss_dssp GGGEEEESHHHHHHHHHHHHHCCTTT-CEEEEC--SSSCTHHHHH--HHHHTCEEEECC
T ss_pred hHHEEEcCCHHHHHHHHHHHHhCCCC-CEEEEe--CCChHHHHHH--HHHcCCEEEEee
Confidence 34577877766666666665543331 356654 4777775433 234577777665
No 472
>2rdm_A Response regulator receiver protein; structural genomics, unknown function, PSI-2, protein struct initiative; HET: MSE; 1.76A {Sinorhizobium medicae}
Probab=29.32 E-value=1.8e+02 Score=21.88 Aligned_cols=79 Identities=16% Similarity=0.301 Sum_probs=45.6
Q ss_pred ceEEEEecCCCCcchHHHHHHHHhCCCceEEEcchHH--HHHhh--cCCEEEEcceeEeeCCCcccccchHHHHHHHh-h
Q 045642 225 SFEVFIADGAPKFEGHILAKELDKKGLKAIVITDSAV--FAMIS--RVNMVIVGVHAVMANGGVIAPAGLHVLALAAK-K 299 (406)
Q Consensus 225 ~f~ViV~EsrP~~eG~~~a~~L~~~GI~vt~I~Dsav--~~~m~--~vd~VllGAdav~~nG~vvnk~GT~~lAl~Ak-~ 299 (406)
..+|.++|..|.. ...+...|...|+.|....+..- ..+-. ..|.||+..+- .+| ..|--.+..+-+ .
T Consensus 5 ~~~ilivdd~~~~-~~~l~~~L~~~g~~v~~~~~~~~a~~~l~~~~~~dlvi~d~~l--~~~----~~g~~~~~~l~~~~ 77 (132)
T 2rdm_A 5 AVTILLADDEAIL-LLDFESTLTDAGFLVTAVSSGAKAIEMLKSGAAIDGVVTDIRF--CQP----PDGWQVARVAREID 77 (132)
T ss_dssp SCEEEEECSSHHH-HHHHHHHHHHTTCEEEEESSHHHHHHHHHTTCCCCEEEEESCC--SSS----SCHHHHHHHHHHHC
T ss_pred CceEEEEcCcHHH-HHHHHHHHHHcCCEEEEECCHHHHHHHHHcCCCCCEEEEeeeC--CCC----CCHHHHHHHHHhcC
Confidence 4678888777642 24556677778888877665432 22222 47888886542 221 224333333333 3
Q ss_pred CCCceEEecCC
Q 045642 300 HDVPFVVVAST 310 (406)
Q Consensus 300 ~~vPv~V~aes 310 (406)
.++|+++++..
T Consensus 78 ~~~~ii~~s~~ 88 (132)
T 2rdm_A 78 PNMPIVYISGH 88 (132)
T ss_dssp TTCCEEEEESS
T ss_pred CCCCEEEEeCC
Confidence 47999998754
No 473
>3ab8_A Putative uncharacterized protein TTHA0350; tandem-type universal stress protein, unknown function; HET: ATP; 1.70A {Thermus thermophilus} PDB: 3ab7_A*
Probab=29.28 E-value=1.6e+02 Score=25.99 Aligned_cols=44 Identities=11% Similarity=0.189 Sum_probs=29.7
Q ss_pred hhcCCEEEEcceeEeeCC-Cccc-ccchHHHHHHHhhCCCceEEecCCcc
Q 045642 265 ISRVNMVIVGVHAVMANG-GVIA-PAGLHVLALAAKKHDVPFVVVASTHE 312 (406)
Q Consensus 265 m~~vd~VllGAdav~~nG-~vvn-k~GT~~lAl~Ak~~~vPv~V~aes~K 312 (406)
-.++|.|++|.+. .| ++-. -.|+..-.++ ++.++||+++-+.++
T Consensus 107 ~~~~dliV~G~~g---~~~~~~~~~~Gs~~~~v~-~~a~~PVlvv~~~~~ 152 (268)
T 3ab8_A 107 ARAADLLVLGRSG---EAHGDGFGGLGSTADRVL-RASPVPVLLAPGEPV 152 (268)
T ss_dssp HTTCSEEEEESSC---TTSCTTCCSCCHHHHHHH-HHCSSCEEEECSSCC
T ss_pred ccCCCEEEEeccC---CCccccccccchhHHHHH-HhCCCCEEEECCCCC
Confidence 4579999999985 22 3322 3677655554 667899999876543
No 474
>2ejb_A Probable aromatic acid decarboxylase; phenylacrylic acid decarboxylase, X-RAY diffraction, structural genomics, NPPSFA; 2.15A {Aquifex aeolicus}
Probab=29.23 E-value=1.2e+02 Score=26.49 Aligned_cols=20 Identities=20% Similarity=0.265 Sum_probs=10.4
Q ss_pred HHHHHHHHcCCceEEEEecC
Q 045642 214 EFLCAAKEKKRSFEVFIADG 233 (406)
Q Consensus 214 ~~L~~A~~~~~~f~ViV~Es 233 (406)
++++...+.|...+|+++++
T Consensus 19 ~l~~~L~~~g~~V~vv~T~~ 38 (189)
T 2ejb_A 19 KLLQVLEELDFSVDLVISRN 38 (189)
T ss_dssp HHHHHHHHTTCEEEEEECHH
T ss_pred HHHHHHHHCCCEEEEEEChh
Confidence 34444444455556666554
No 475
>1k66_A Phytochrome response regulator RCPB; CHEY homologue, homodimer, APO-protein, (beta/alpha)5, signaling protein; 1.75A {Tolypothrix SP} SCOP: c.23.1.1
Probab=29.23 E-value=1.7e+02 Score=22.54 Aligned_cols=79 Identities=10% Similarity=0.244 Sum_probs=47.2
Q ss_pred CceEEEEecCCCCcchHHHHHHHHhCCC--ceEEEcchH--HHHHh-----------hcCCEEEEcceeEeeCCCccccc
Q 045642 224 RSFEVFIADGAPKFEGHILAKELDKKGL--KAIVITDSA--VFAMI-----------SRVNMVIVGVHAVMANGGVIAPA 288 (406)
Q Consensus 224 ~~f~ViV~EsrP~~eG~~~a~~L~~~GI--~vt~I~Dsa--v~~~m-----------~~vd~VllGAdav~~nG~vvnk~ 288 (406)
...+|.++|..|.. ...+...|.+.|. .|....+.. +..+- ...|.||+..+- . ...
T Consensus 5 ~~~~iLivdd~~~~-~~~l~~~L~~~g~~~~v~~~~~~~~al~~l~~~~~~~~~~~~~~~dlvi~D~~l--~-----~~~ 76 (149)
T 1k66_A 5 ATQPLLVVEDSDED-FSTFQRLLQREGVVNPIYRCITGDQALDFLYQTGSYCNPDIAPRPAVILLDLNL--P-----GTD 76 (149)
T ss_dssp TTSCEEEECCCHHH-HHHHHHHHHHTTBCSCEEEECSHHHHHHHHHTCCSSSCGGGCCCCSEEEECSCC--S-----SSC
T ss_pred CCccEEEEECCHHH-HHHHHHHHHHcCCCceEEEECCHHHHHHHHHhcccccCcccCCCCcEEEEECCC--C-----CCC
Confidence 45678888877643 3456777888887 677666543 23333 346788876542 2 223
Q ss_pred chHHHHHHHhh---CCCceEEecCC
Q 045642 289 GLHVLALAAKK---HDVPFVVVAST 310 (406)
Q Consensus 289 GT~~lAl~Ak~---~~vPv~V~aes 310 (406)
|--.+..+-+. ..+|+++++..
T Consensus 77 g~~~~~~l~~~~~~~~~~ii~~t~~ 101 (149)
T 1k66_A 77 GREVLQEIKQDEVLKKIPVVIMTTS 101 (149)
T ss_dssp HHHHHHHHTTSTTGGGSCEEEEESC
T ss_pred HHHHHHHHHhCcccCCCeEEEEeCC
Confidence 44444444443 46899998754
No 476
>1poi_B Glutaconate coenzyme A-transferase; COA, glutamate, protein fermentation; 2.50A {Acidaminococcus fermentans} SCOP: c.124.1.3
Probab=29.23 E-value=2.9e+02 Score=25.40 Aligned_cols=92 Identities=11% Similarity=0.065 Sum_probs=55.3
Q ss_pred HHHHHHHHHHhcccCcEEEe-ccChHHHHHHHHHHHHcCCceEEEEecC-----CCCc---chHHHHHHHHhCCCceEEE
Q 045642 186 REGIAEQAMELIHQNEVILT-LGHSKFVKEFLCAAKEKKRSFEVFIADG-----APKF---EGHILAKELDKKGLKAIVI 256 (406)
Q Consensus 186 ~~~I~~~a~~~I~~g~~ILT-~g~S~tV~~~L~~A~~~~~~f~ViV~Es-----rP~~---eG~~~a~~L~~~GI~vt~I 256 (406)
.+.|+.++++.|.+|++|-+ +|-...|..++.... ++.+.+.. |+ .|.. .+.. ..+. ....-+
T Consensus 8 ~e~Ia~~aA~~i~dG~~v~lGiGiP~~va~~~~~~~--~~~l~l~~-E~G~lg~~p~~~~~~~~d--~~~~---~~a~~~ 79 (260)
T 1poi_B 8 KEMQAVTIAKQIKNGQVVTVGTGLPLIGASVAKRVY--APDCHIIV-ESGLMDCSPVEVPRSVGD--LRFM---AHCGCI 79 (260)
T ss_dssp HHHHHHHHHTTCCTTCEEECCSSHHHHHHHHHHHTT--CTTCEEEE-TTTEEEECCSSCCSSTTC--HHHH---TSEEEE
T ss_pred HHHHHHHHHHhCCCCCEEEeCCCHHHHHHHHHHHhc--CCCEEEEE-eCceecCcccCcccCccC--CCcE---eehhhh
Confidence 46899999999999998877 674444555554432 34554443 43 3320 1100 0011 124344
Q ss_pred cch-HHHHH-----hh--cCCEEEEcceeEeeCCCcc
Q 045642 257 TDS-AVFAM-----IS--RVNMVIVGVHAVMANGGVI 285 (406)
Q Consensus 257 ~Ds-av~~~-----m~--~vd~VllGAdav~~nG~vv 285 (406)
.++ ..+.+ +. ++|..|+||=-|-.+|.+-
T Consensus 80 ~~~~~~fd~~~~~~~~~g~~Dv~ilGa~qVD~~Gnvn 116 (260)
T 1poi_B 80 WPNVRFVGFEINEYLHKANRLIAFIGGAQIDPYGNVN 116 (260)
T ss_dssp CCHHHHHHHHHHHHHHTCCCEEEEECCSEECTTCCEE
T ss_pred cCHHHHhcccchhhhhcCCccEEEeChHHhCCCCCcc
Confidence 454 44444 43 5899999999999999888
No 477
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=29.16 E-value=35 Score=31.93 Aligned_cols=10 Identities=10% Similarity=0.517 Sum_probs=5.2
Q ss_pred eEEEEecCCC
Q 045642 226 FEVFIADGAP 235 (406)
Q Consensus 226 f~ViV~EsrP 235 (406)
++|.|+|.+|
T Consensus 28 ~~V~v~Er~~ 37 (397)
T 3oz2_A 28 LKTLMIEKRP 37 (397)
T ss_dssp CCEEEECSSS
T ss_pred CcEEEEeCCC
Confidence 4555555443
No 478
>1ex2_A Protein MAF; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; HET: SUC PO4; 1.85A {Bacillus subtilis} SCOP: c.51.4.2 PDB: 1exc_A*
Probab=29.15 E-value=1.2e+02 Score=26.67 Aligned_cols=90 Identities=12% Similarity=0.145 Sum_probs=56.6
Q ss_pred ccChHHHHHHHHHHHHcCCceEEEEe---cCCCCcc-hHHHHHHHHhCCCceEEEcchHHHHHhhcC-CEEEEcceeEee
Q 045642 206 LGHSKFVKEFLCAAKEKKRSFEVFIA---DGAPKFE-GHILAKELDKKGLKAIVITDSAVFAMISRV-NMVIVGVHAVMA 280 (406)
Q Consensus 206 ~g~S~tV~~~L~~A~~~~~~f~ViV~---EsrP~~e-G~~~a~~L~~~GI~vt~I~Dsav~~~m~~v-d~VllGAdav~~ 280 (406)
-|.|..=.++|..+ |-.|.|+.. |+....+ -..++..|+..+ +-.+..+. +.+|||||.|..
T Consensus 8 AS~SPrR~eLL~~~---gi~f~v~~~~iDE~~~~~~~p~~~v~~lA~~K----------A~av~~~~~~~~VigaDTvV~ 74 (189)
T 1ex2_A 8 ASQSPRRKELLDLL---QLPYSIIVSEVEEKLNRNFSPEENVQWLAKQK----------AKAVADLHPHAIVIGADTMVC 74 (189)
T ss_dssp CCCCHHHHHHHHTT---CCCCEECCCCCCCCCCTTSCHHHHHHHHHHHH----------HHHHHHHCTTSEEEEEEEEEE
T ss_pred ECCCHHHHHHHHhC---CCCeEEECCCCCCCCCCCCCHHHHHHHHHHHH----------HHHHHHHcCCCeEEEeCeEEE
Confidence 45666656666553 678988854 3322222 257788887654 11222222 228999999875
Q ss_pred -CCCcccccchHHHH--HHHhhCCCceEEec
Q 045642 281 -NGGVIAPAGLHVLA--LAAKKHDVPFVVVA 308 (406)
Q Consensus 281 -nG~vvnk~GT~~lA--l~Ak~~~vPv~V~a 308 (406)
||.++.|-.+..-| ++.+..|...-|.+
T Consensus 75 ~~g~ilgKP~~~~eA~~mL~~lsG~~h~v~T 105 (189)
T 1ex2_A 75 LDGECLGKPQDQEEAASMLRRLSGRSHSVIT 105 (189)
T ss_dssp ETTEEECCCSSHHHHHHHHHHHTTSEEEEEE
T ss_pred ECCEEcCCCCCHHHHHHHHHHhCCCcEEEEE
Confidence 88899999998776 56666676665554
No 479
>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A
Probab=29.07 E-value=2e+02 Score=26.23 Aligned_cols=109 Identities=21% Similarity=0.184 Sum_probs=58.3
Q ss_pred CcEEEeccChHHHHHHHHHH-HHcCCceEEEEecCCCCc-chHHHHHHHHh-CCCceEE--Ecc-hHHHHHhhcCCEEEE
Q 045642 200 NEVILTLGHSKFVKEFLCAA-KEKKRSFEVFIADGAPKF-EGHILAKELDK-KGLKAIV--ITD-SAVFAMISRVNMVIV 273 (406)
Q Consensus 200 g~~ILT~g~S~tV~~~L~~A-~~~~~~f~ViV~EsrP~~-eG~~~a~~L~~-~GI~vt~--I~D-sav~~~m~~vd~Vll 273 (406)
+.+||+.|.++.+=..|... .++| .+|+++.-.+.. +.......|.. .++.+.. +.| .++..++..+|.||-
T Consensus 9 ~~~vlVTGatGfIG~~l~~~Ll~~G--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~Vih 86 (338)
T 2rh8_A 9 KKTACVVGGTGFVASLLVKLLLQKG--YAVNTTVRDPDNQKKVSHLLELQELGDLKIFRADLTDELSFEAPIAGCDFVFH 86 (338)
T ss_dssp CCEEEEECTTSHHHHHHHHHHHHTT--CEEEEEESCTTCTTTTHHHHHHGGGSCEEEEECCTTTSSSSHHHHTTCSEEEE
T ss_pred CCEEEEECCchHHHHHHHHHHHHCC--CEEEEEEcCcchhhhHHHHHhcCCCCcEEEEecCCCChHHHHHHHcCCCEEEE
Confidence 56889889887776655443 3344 566654333321 11111123321 2333221 122 345667788999886
Q ss_pred cceeEe---eC----CCcccccchHHHHHHHhhCC-CceEEecCC
Q 045642 274 GVHAVM---AN----GGVIAPAGLHVLALAAKKHD-VPFVVVAST 310 (406)
Q Consensus 274 GAdav~---~n----G~vvnk~GT~~lAl~Ak~~~-vPv~V~aes 310 (406)
-|-.+- .+ ---+|-.||..+.-+|+.++ ++-+|.+.|
T Consensus 87 ~A~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~~~v~r~V~~SS 131 (338)
T 2rh8_A 87 VATPVHFASEDPENDMIKPAIQGVVNVMKACTRAKSVKRVILTSS 131 (338)
T ss_dssp ESSCCCC---------CHHHHHHHHHHHHHHHHCTTCCEEEEECC
T ss_pred eCCccCCCCCCcHHHHHHHHHHHHHHHHHHHHHcCCcCEEEEEec
Confidence 542210 01 11236789999999998885 665555544
No 480
>1to6_A Glycerate kinase; glycerate metabolism, structural genomics T831, PSI, protein structure initiative; 2.50A {Neisseria meningitidis serogroup A} SCOP: c.141.1.1
Probab=29.02 E-value=33 Score=33.70 Aligned_cols=49 Identities=20% Similarity=0.205 Sum_probs=32.9
Q ss_pred HHHHhhcCCEEEEcceeEeeCCCcccccchHHHHHHHhhCCCceEEecCCcc
Q 045642 261 VFAMISRVNMVIVGVHAVMANGGVIAPAGLHVLALAAKKHDVPFVVVASTHE 312 (406)
Q Consensus 261 v~~~m~~vd~VllGAdav~~nG~vvnk~GT~~lAl~Ak~~~vPv~V~aes~K 312 (406)
.-..++++|.||.|==++-.. ++..| --.-+|-.||. +|||+++|.+..
T Consensus 272 l~~~l~~ADLVITGEG~~D~Q-T~~GK-~p~gVa~~A~~-~~PviaiaG~~~ 320 (371)
T 1to6_A 272 FDKKVSDVDLVIVGEGRLDRQ-SLAGK-APIGVAKRTPV-GVPVVAICGSLV 320 (371)
T ss_dssp HHHHTTTCSEEEECCSEECST-TTTTC-HHHHHHTTSCT-TCCEEEEESEEC
T ss_pred HHHHhcCCCEEEECCCCCCCC-CCCCc-HHHHHHHHHhc-CCCEEEEeCCCC
Confidence 345677899999996444321 22222 23456777888 999999998754
No 481
>3odg_A Xanthosine phosphorylase; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics; HET: XAN; 1.64A {Yersinia pseudotuberculosis} PDB: 1yqq_A* 1yqu_A* 1yr3_A*
Probab=28.98 E-value=1.5e+02 Score=27.83 Aligned_cols=68 Identities=15% Similarity=0.184 Sum_probs=41.6
Q ss_pred hHHHHHHHHHHH-HcCCce--EEEEecCCCCcchHHHHHHHHhCCCceEEEcchHHHHHhhcCCEEEEcceeEeeCCCcc
Q 045642 209 SKFVKEFLCAAK-EKKRSF--EVFIADGAPKFEGHILAKELDKKGLKAIVITDSAVFAMISRVNMVIVGVHAVMANGGVI 285 (406)
Q Consensus 209 S~tV~~~L~~A~-~~~~~f--~ViV~EsrP~~eG~~~a~~L~~~GI~vt~I~Dsav~~~m~~vd~VllGAdav~~nG~vv 285 (406)
+..+.+.+.+++ +.+.++ =||++-+.|.++...-.+.+++ +|||+|=
T Consensus 173 d~~L~~~a~~aA~~~gi~~~~Gvy~~~~Gp~feT~AE~~~~r~------------------------~GadaVg------ 222 (287)
T 3odg_A 173 DKDLRADMAKIAQQLDIPLTEGVFVSYPGPCFETPAEIRMMQI------------------------IGGDVVG------ 222 (287)
T ss_dssp CHHHHHHHHHHHHHHTCCCEEEEEEECCCSSCCCHHHHHHHHH------------------------TTCSEEE------
T ss_pred CHHHHHHHHHHHHHCCCCEEEEEEEEecCCccCCHHHHHHHHH------------------------cCCEEEe------
Confidence 445555555544 334333 3566677777765322222222 1666654
Q ss_pred cccchHHHHHHHhhCCCceEEec
Q 045642 286 APAGLHVLALAAKKHDVPFVVVA 308 (406)
Q Consensus 286 nk~GT~~lAl~Ak~~~vPv~V~a 308 (406)
+=|.+.|.+|+++++|+.+++
T Consensus 223 --Me~~pea~vA~~~gi~~~~I~ 243 (287)
T 3odg_A 223 --MSVVPEVLSAAHCGLKVIALT 243 (287)
T ss_dssp --SSSHHHHHHHHHHTCEEEEEE
T ss_pred --CcHHHHHHHHHHcCCCEEEEE
Confidence 346889999999999999987
No 482
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=28.97 E-value=1.7e+02 Score=27.14 Aligned_cols=73 Identities=10% Similarity=0.117 Sum_probs=41.5
Q ss_pred cCcEEEeccChHHHHHHHHHHHHcCCceEEEEecCCCCcchHHHHHHHHhC--CCceEEEcchHHHHHhhcCCEEEE
Q 045642 199 QNEVILTLGHSKFVKEFLCAAKEKKRSFEVFIADGAPKFEGHILAKELDKK--GLKAIVITDSAVFAMISRVNMVIV 273 (406)
Q Consensus 199 ~g~~ILT~g~S~tV~~~L~~A~~~~~~f~ViV~EsrP~~eG~~~a~~L~~~--GI~vt~I~Dsav~~~m~~vd~Vll 273 (406)
.|.++|.+|....-..+.....+.|.. +|+|+ +|-......+++++... ++++.......+...+.++|.||=
T Consensus 126 ~~k~vlVlGaGG~g~aia~~L~~~G~~-~v~i~-~R~~~~a~~la~~~~~~~~~~~i~~~~~~~l~~~l~~~DiVIn 200 (283)
T 3jyo_A 126 KLDSVVQVGAGGVGNAVAYALVTHGVQ-KLQVA-DLDTSRAQALADVINNAVGREAVVGVDARGIEDVIAAADGVVN 200 (283)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTCS-EEEEE-CSSHHHHHHHHHHHHHHHTSCCEEEECSTTHHHHHHHSSEEEE
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCC-EEEEE-ECCHHHHHHHHHHHHhhcCCceEEEcCHHHHHHHHhcCCEEEE
Confidence 456777777766666666665544432 45554 33323345566666654 355555554455556667776663
No 483
>3eh7_A 4-hydroxybutyrate COA-transferase; citrate lyase, structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.05A {Porphyromonas gingivalis}
Probab=28.95 E-value=64 Score=32.29 Aligned_cols=114 Identities=14% Similarity=0.041 Sum_probs=57.9
Q ss_pred HHHHHhcccCcEEEeccChHHHHHHHHHHHH---cCCceEEEEecC-CC--Cc--------------chHHHHHHHHhCC
Q 045642 191 EQAMELIHQNEVILTLGHSKFVKEFLCAAKE---KKRSFEVFIADG-AP--KF--------------EGHILAKELDKKG 250 (406)
Q Consensus 191 ~~a~~~I~~g~~ILT~g~S~tV~~~L~~A~~---~~~~f~ViV~Es-rP--~~--------------eG~~~a~~L~~~G 250 (406)
+.|+++|++|++|.+.|....-..++....+ .-++++++..-+ .| .. .|..+. ++.+.|
T Consensus 19 eEAv~~IkdGd~V~~~g~~g~P~~L~~ALa~r~~~l~~v~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r-~~i~~G 97 (434)
T 3eh7_A 19 EEAVKHIKNGERVALSHAAGVPQSCVDALVQQADLFQNVEIYHMLCLGEGKYMAPEMAPHFRHITNFVGGNSR-KAVEEN 97 (434)
T ss_dssp HHHHTTCCTTCEEEECCGGGCCHHHHHHHHHSTTTC--CEEECCBCTTCC------------------------------
T ss_pred HHHHHhCCCcCEEEECCccCCHHHHHHHHHHhHhhcCCeEEEEeccCCchhhcChhhhCeEEEecCcCCHHHH-HHHHCC
Confidence 4566789999999997755544444444333 224566664321 11 11 111111 222233
Q ss_pred -CceEEEcchHHHHHhh----cCCEEEEcceeEeeCCCcccccchHHHHHHHhhCCCceEE
Q 045642 251 -LKAIVITDSAVFAMIS----RVNMVIVGVHAVMANGGVIAPAGLHVLALAAKKHDVPFVV 306 (406)
Q Consensus 251 -I~vt~I~Dsav~~~m~----~vd~VllGAdav~~nG~vvnk~GT~~lAl~Ak~~~vPv~V 306 (406)
++..-+.-+.+..++. ++|.+++.+...-.+|.+.-.. +...+.++.....-|++
T Consensus 98 ~~~~~p~~ls~~~~~~~~g~~~~DVAli~as~~D~~Gn~s~g~-s~~~~~~~~~~A~~VI~ 157 (434)
T 3eh7_A 98 RADFIPVFFYEVPSMIRKDILHIDVAIVQLSMPDENGYCSFGV-SCDYSKPAAESAHLVIG 157 (434)
T ss_dssp CTTCCCCCGGGHHHHHHTTSSCCSEEEEEECCCCTTSEEECTT-BCTTHHHHHHHCSEEEE
T ss_pred CccccChhHHHHHHHHHhCCCCCcEEEEEEecCCCCCCEEecC-ccchHHHHHHhCCeEEE
Confidence 3333344555655554 4899999999998898886422 22344444444554444
No 484
>1q7r_A Predicted amidotransferase; structural genomics, YAAE, PDX2, predicted glutamine amidotransferase, PSI; HET: MSE; 1.90A {Geobacillus stearothermophilus} SCOP: c.23.16.1
Probab=28.94 E-value=66 Score=28.44 Aligned_cols=77 Identities=12% Similarity=0.138 Sum_probs=46.2
Q ss_pred ceEEEEecCCCCcchHHHHHHHHhCCCceEEEcchHHHHHhhcCCEEEEcceeEeeCCCccc-------ccchHHHHHHH
Q 045642 225 SFEVFIADGAPKFEGHILAKELDKKGLKAIVITDSAVFAMISRVNMVIVGVHAVMANGGVIA-------PAGLHVLALAA 297 (406)
Q Consensus 225 ~f~ViV~EsrP~~eG~~~a~~L~~~GI~vt~I~Dsav~~~m~~vd~VllGAdav~~nG~vvn-------k~GT~~lAl~A 297 (406)
+.+|.|++. +..- ....+.|.+.|+.+.+++... .+.++|.+|++ ||--. ..+...+...+
T Consensus 23 ~~~I~il~~-~~~~-~~~~~~l~~~G~~~~~~~~~~---~l~~~Dglil~-------GG~~~~~~~~~~~~~~~~~i~~~ 90 (219)
T 1q7r_A 23 NMKIGVLGL-QGAV-REHVRAIEACGAEAVIVKKSE---QLEGLDGLVLP-------GGESTTMRRLIDRYGLMEPLKQF 90 (219)
T ss_dssp CCEEEEESC-GGGC-HHHHHHHHHTTCEEEEECSGG---GGTTCSEEEEC-------CCCHHHHHHHHHHTTCHHHHHHH
T ss_pred CCEEEEEeC-CCCc-HHHHHHHHHCCCEEEEECCHH---HHhhCCEEEEC-------CCChHHHHHHhhhhHHHHHHHHH
Confidence 456777754 2211 245688889999999988643 25678888774 22111 12222333344
Q ss_pred hhCCCceEEecCCccc
Q 045642 298 KKHDVPFVVVASTHEL 313 (406)
Q Consensus 298 k~~~vPv~V~aes~K~ 313 (406)
...++||+-+|--+.+
T Consensus 91 ~~~~~PilGIC~G~Ql 106 (219)
T 1q7r_A 91 AAAGKPMFGTCAGLIL 106 (219)
T ss_dssp HHTTCCEEEETTHHHH
T ss_pred HHcCCeEEEECHHHHH
Confidence 4679999999875544
No 485
>3hzh_A Chemotaxis response regulator (CHEY-3); phosphatase, complex, response regulator, receiver domain, two-component signal transduction; HET: BFD; 1.96A {Borrelia burgdorferi}
Probab=28.91 E-value=2.2e+02 Score=22.62 Aligned_cols=79 Identities=14% Similarity=0.254 Sum_probs=43.3
Q ss_pred CceEEEEecCCCCcchHHHHHHHHhCCCceE-EEcchHHH-HHh--h--cCCEEEEcceeEeeCCCcccccchHHHHHHH
Q 045642 224 RSFEVFIADGAPKFEGHILAKELDKKGLKAI-VITDSAVF-AMI--S--RVNMVIVGVHAVMANGGVIAPAGLHVLALAA 297 (406)
Q Consensus 224 ~~f~ViV~EsrP~~eG~~~a~~L~~~GI~vt-~I~Dsav~-~~m--~--~vd~VllGAdav~~nG~vvnk~GT~~lAl~A 297 (406)
..++|+|+|..|.. ...+...|.+.|+.+. ...+..-+ ..+ . ..|.||+..+- . ..-|--.+..+-
T Consensus 35 ~~~~Ilivdd~~~~-~~~l~~~L~~~g~~v~~~~~~~~~al~~l~~~~~~~dliilD~~l--~-----~~~g~~~~~~lr 106 (157)
T 3hzh_A 35 IPFNVLIVDDSVFT-VKQLTQIFTSEGFNIIDTAADGEEAVIKYKNHYPNIDIVTLXITM--P-----KMDGITCLSNIM 106 (157)
T ss_dssp EECEEEEECSCHHH-HHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGCCEEEECSSC--S-----SSCHHHHHHHHH
T ss_pred CceEEEEEeCCHHH-HHHHHHHHHhCCCeEEEEECCHHHHHHHHHhcCCCCCEEEEeccC--C-----CccHHHHHHHHH
Confidence 45677777766532 2345566667777766 44443221 122 2 56888886542 2 223443343333
Q ss_pred h-hCCCceEEecCC
Q 045642 298 K-KHDVPFVVVAST 310 (406)
Q Consensus 298 k-~~~vPv~V~aes 310 (406)
+ ...+|+++++..
T Consensus 107 ~~~~~~~ii~ls~~ 120 (157)
T 3hzh_A 107 EFDKNARVIMISAL 120 (157)
T ss_dssp HHCTTCCEEEEESC
T ss_pred hhCCCCcEEEEecc
Confidence 3 357999998754
No 486
>4es6_A Uroporphyrinogen-III synthase; heme-biosynthesis, cytoplasmi; 2.22A {Pseudomonas aeruginosa}
Probab=28.87 E-value=1.1e+02 Score=27.45 Aligned_cols=60 Identities=12% Similarity=-0.035 Sum_probs=0.0
Q ss_pred HHHHHhcccCcEEEeccChHHHHHHHHHHHHcCCc---eEEEEecCCCCcchHHHHHHHHhCCCceEEEcc
Q 045642 191 EQAMELIHQNEVILTLGHSKFVKEFLCAAKEKKRS---FEVFIADGAPKFEGHILAKELDKKGLKAIVITD 258 (406)
Q Consensus 191 ~~a~~~I~~g~~ILT~g~S~tV~~~L~~A~~~~~~---f~ViV~EsrP~~eG~~~a~~L~~~GI~vt~I~D 258 (406)
+.+...+.+.|.|+ +-....|..++..+.+.+.. .+++++ |..+|+.|.+.|+.+.++++
T Consensus 50 ~~~l~~l~~~d~vi-fTS~~aV~~~~~~l~~~~~~~~~~~i~aV-------G~~Ta~~L~~~G~~~~~~~~ 112 (254)
T 4es6_A 50 RTLMLDLDRYCAVV-VVSKPAARLGLERLDRYWPQPPQQTWCSV-------GAATAAILEAYGLDVTYPEQ 112 (254)
T ss_dssp HHHHHTGGGCSEEE-ECSHHHHHHHHHHHHHHCSSCCSCEEEES-------SHHHHHHHHHHTCCEECCSS
T ss_pred HHHHHhccCCCEEE-EECHHHHHHHHHHHHHhCCCcccCEEEEE-------CHHHHHHHHHcCCCcccCCC
No 487
>2cwd_A Low molecular weight phosphotyrosine protein PHOS; tyrosine phosphatase, structural genomics; 1.90A {Thermus thermophilus}
Probab=28.83 E-value=58 Score=27.66 Aligned_cols=70 Identities=13% Similarity=0.071 Sum_probs=50.8
Q ss_pred ccChHHHHHHHHHHHH-cC--CceEEEEecCCCCcch----HHHHHHHHhCCCceEEEcchHH-HHHhhcCCEEEEcce
Q 045642 206 LGHSKFVKEFLCAAKE-KK--RSFEVFIADGAPKFEG----HILAKELDKKGLKAIVITDSAV-FAMISRVNMVIVGVH 276 (406)
Q Consensus 206 ~g~S~tV~~~L~~A~~-~~--~~f~ViV~EsrP~~eG----~~~a~~L~~~GI~vt~I~Dsav-~~~m~~vd~VllGAd 276 (406)
.++|...+.+|++... .| .+|.|.=+-+.|+..| ....+.|.+.||++. -.-..+ ...+...|.||.=.+
T Consensus 15 ~cRSpmAEal~~~~~~~~gl~~~~~v~SAGt~~~~~g~~~~p~a~~~l~e~Gid~s-~~ar~l~~~~~~~~DlIi~M~~ 92 (161)
T 2cwd_A 15 ICRSPMAEGIFRKLLKERGLEDRFEVDSAGTGAWHVGEPMDPRARRVLEEEGAYFP-HVARRLTREDVLAYDHILVMDR 92 (161)
T ss_dssp SSHHHHHHHHHHHHHHHHTCTTTEEEEEEESSCTTTTCCCCHHHHHHHHHHTCCCC-CCCCBCCHHHHHHCSEEEESSH
T ss_pred HHHHHHHHHHHHHHHHHcCCCCcEEEEecccCCCccCCCCCHHHHHHHHHcCcCcc-ccccCCCHhHhccCCEEEECCh
Confidence 4679999999998764 24 3689999999996555 477888999999876 322222 345567888887654
No 488
>3hv2_A Response regulator/HD domain protein; PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.50A {Pseudomonas fluorescens pf-5}
Probab=28.74 E-value=1.5e+02 Score=23.34 Aligned_cols=79 Identities=16% Similarity=0.203 Sum_probs=45.5
Q ss_pred CceEEEEecCCCCcchHHHHHHHHhCCCceEEEcchHHH-HHhh--cCCEEEEcceeEeeCCCcccccchHHHHHHHh-h
Q 045642 224 RSFEVFIADGAPKFEGHILAKELDKKGLKAIVITDSAVF-AMIS--RVNMVIVGVHAVMANGGVIAPAGLHVLALAAK-K 299 (406)
Q Consensus 224 ~~f~ViV~EsrP~~eG~~~a~~L~~~GI~vt~I~Dsav~-~~m~--~vd~VllGAdav~~nG~vvnk~GT~~lAl~Ak-~ 299 (406)
+..+|.|+|..|.. ...+...|.+.|..|....+..-+ ..+. ..|.||+..+- . ..-|.-.+..+-+ .
T Consensus 13 ~~~~ILivdd~~~~-~~~l~~~L~~~g~~v~~~~~~~~a~~~l~~~~~dlvi~D~~l--~-----~~~g~~~~~~l~~~~ 84 (153)
T 3hv2_A 13 RRPEILLVDSQEVI-LQRLQQLLSPLPYTLHFARDATQALQLLASREVDLVISAAHL--P-----QMDGPTLLARIHQQY 84 (153)
T ss_dssp SCCEEEEECSCHHH-HHHHHHHHTTSSCEEEEESSHHHHHHHHHHSCCSEEEEESCC--S-----SSCHHHHHHHHHHHC
T ss_pred CCceEEEECCCHHH-HHHHHHHhcccCcEEEEECCHHHHHHHHHcCCCCEEEEeCCC--C-----cCcHHHHHHHHHhHC
Confidence 45677777776542 235566677778777766654332 2222 47888776542 2 2234444443333 3
Q ss_pred CCCceEEecCC
Q 045642 300 HDVPFVVVAST 310 (406)
Q Consensus 300 ~~vPv~V~aes 310 (406)
..+|+++++..
T Consensus 85 ~~~~ii~~s~~ 95 (153)
T 3hv2_A 85 PSTTRILLTGD 95 (153)
T ss_dssp TTSEEEEECCC
T ss_pred CCCeEEEEECC
Confidence 57999998764
No 489
>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}
Probab=28.70 E-value=1.6e+02 Score=25.95 Aligned_cols=76 Identities=20% Similarity=0.316 Sum_probs=45.5
Q ss_pred cCcEEEeccChHHHHHHHHHHHHcCCceEEEEecCCCCcchHHHHHHHHhCCCceEEE-cc----hHHHHHhh-------
Q 045642 199 QNEVILTLGHSKFVKEFLCAAKEKKRSFEVFIADGAPKFEGHILAKELDKKGLKAIVI-TD----SAVFAMIS------- 266 (406)
Q Consensus 199 ~g~~ILT~g~S~tV~~~L~~A~~~~~~f~ViV~EsrP~~eG~~~a~~L~~~GI~vt~I-~D----sav~~~m~------- 266 (406)
.|.+||..|.|+-+=..+.....+ +..+|+++..+.......++++|.+.|-++.++ .| .++..++.
T Consensus 3 ~~k~vlVTGas~giG~~ia~~l~~-~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g 81 (246)
T 2uvd_A 3 KGKVALVTGASRGIGRAIAIDLAK-QGANVVVNYAGNEQKANEVVDEIKKLGSDAIAVRADVANAEDVTNMVKQTVDVFG 81 (246)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHH-TTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEECCCcHHHHHHHHHHHH-CCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 356788888887776666444321 346788775433333456777887777666654 33 23444443
Q ss_pred cCCEEEEcc
Q 045642 267 RVNMVIVGV 275 (406)
Q Consensus 267 ~vd~VllGA 275 (406)
++|.+|--|
T Consensus 82 ~id~lv~nA 90 (246)
T 2uvd_A 82 QVDILVNNA 90 (246)
T ss_dssp CCCEEEECC
T ss_pred CCCEEEECC
Confidence 577777655
No 490
>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=28.67 E-value=91 Score=28.02 Aligned_cols=98 Identities=17% Similarity=0.184 Sum_probs=58.5
Q ss_pred cCcEEEeccChHHHHHHHHHHH-HcCCceEEEEecCCCCcchHHHHHHHHhCC-CceEEE-cc----hHHHHHhh-----
Q 045642 199 QNEVILTLGHSKFVKEFLCAAK-EKKRSFEVFIADGAPKFEGHILAKELDKKG-LKAIVI-TD----SAVFAMIS----- 266 (406)
Q Consensus 199 ~g~~ILT~g~S~tV~~~L~~A~-~~~~~f~ViV~EsrP~~eG~~~a~~L~~~G-I~vt~I-~D----sav~~~m~----- 266 (406)
.|.++|+.|.|+.+=..+.... ++| .+|+++... ......++.+|.+.| -++..+ .| .++..++.
T Consensus 9 ~~k~vlVTGas~gIG~aia~~l~~~G--~~V~~~~r~-~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 85 (262)
T 3pk0_A 9 QGRSVVVTGGTKGIGRGIATVFARAG--ANVAVAGRS-TADIDACVADLDQLGSGKVIGVQTDVSDRAQCDALAGRAVEE 85 (262)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTT--CEEEEEESC-HHHHHHHHHHHHTTSSSCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCC--CEEEEEeCC-HHHHHHHHHHHHhhCCCcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 4678888888887766665443 334 578877533 233456777887776 455544 33 23333333
Q ss_pred --cCCEEEEcceeEeeCCCc-------------ccccchHHHHHHHhhC
Q 045642 267 --RVNMVIVGVHAVMANGGV-------------IAPAGLHVLALAAKKH 300 (406)
Q Consensus 267 --~vd~VllGAdav~~nG~v-------------vnk~GT~~lAl~Ak~~ 300 (406)
++|.+|-.|- +...+.+ +|-.|++.++.++..+
T Consensus 86 ~g~id~lvnnAg-~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~ 133 (262)
T 3pk0_A 86 FGGIDVVCANAG-VFPDAPLATMTPEQLNGIFAVNVNGTFYAVQACLDA 133 (262)
T ss_dssp HSCCSEEEECCC-CCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred hCCCCEEEECCC-CCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 6888877663 3333322 4667888877665543
No 491
>2xhz_A KDSD, YRBH, arabinose 5-phosphate isomerase; lipopolysaccharide biogenesis; 2.60A {Escherichia coli}
Probab=28.65 E-value=1.6e+02 Score=24.58 Aligned_cols=63 Identities=14% Similarity=0.267 Sum_probs=38.9
Q ss_pred HHHHHHHhCCCceEEEcchHHHHH----hhcCCEEEEcceeEeeCCCcccccchHHHHHHHhhCCCceEEecCC
Q 045642 241 ILAKELDKKGLKAIVITDSAVFAM----ISRVNMVIVGVHAVMANGGVIAPAGLHVLALAAKKHDVPFVVVAST 310 (406)
Q Consensus 241 ~~a~~L~~~GI~vt~I~Dsav~~~----m~~vd~VllGAdav~~nG~vvnk~GT~~lAl~Ak~~~vPv~V~aes 310 (406)
.++..|...|+++..+.|...... +..-|.||+-. ..| +..-+..++-.||..|+|+++++..
T Consensus 66 ~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~d~vI~iS----~sG---~t~~~~~~~~~ak~~g~~vi~IT~~ 132 (183)
T 2xhz_A 66 KMAATFASTGTPSFFVHPGEAAHGDLGMVTPQDVVIAIS----NSG---ESSEITALIPVLKRLHVPLICITGR 132 (183)
T ss_dssp HHHHHHHTTTCCEEECCTTHHHHHTSTTCCTTCEEEEEC----SSS---CCHHHHHHHHHHHTTTCCEEEEESC
T ss_pred HHHHHHHhcCceEEEeCchHHhhhhhccCCCCCEEEEEe----CCC---CCHHHHHHHHHHHHCCCCEEEEECC
Confidence 345566667777777776554322 23345555432 123 2334677788899999999999864
No 492
>2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii}
Probab=28.56 E-value=73 Score=28.23 Aligned_cols=97 Identities=15% Similarity=0.112 Sum_probs=54.7
Q ss_pred EEEeccChHHHHHHHHHHHHcCCceEEEEecCCCCcchHHHHHHHHhCCCceEEEcchHHHHHhhc--CCEEEEcceeEe
Q 045642 202 VILTLGHSKFVKEFLCAAKEKKRSFEVFIADGAPKFEGHILAKELDKKGLKAIVITDSAVFAMISR--VNMVIVGVHAVM 279 (406)
Q Consensus 202 ~ILT~g~S~tV~~~L~~A~~~~~~f~ViV~EsrP~~eG~~~a~~L~~~GI~vt~I~Dsav~~~m~~--vd~VllGAdav~ 279 (406)
+||..|.++.+=..|.....+| .+|+++..++..+ .|+.+-+-...++..++.. +|.||--|-...
T Consensus 2 ~ilVtGatG~iG~~l~~~L~~g--~~V~~~~r~~~~~----------~~~~~Dl~~~~~~~~~~~~~~~d~vi~~a~~~~ 69 (273)
T 2ggs_A 2 RTLITGASGQLGIELSRLLSER--HEVIKVYNSSEIQ----------GGYKLDLTDFPRLEDFIIKKRPDVIINAAAMTD 69 (273)
T ss_dssp CEEEETTTSHHHHHHHHHHTTT--SCEEEEESSSCCT----------TCEECCTTSHHHHHHHHHHHCCSEEEECCCCCC
T ss_pred EEEEECCCChhHHHHHHHHhcC--CeEEEecCCCcCC----------CCceeccCCHHHHHHHHHhcCCCEEEECCcccC
Confidence 4777788777777766655443 6788776555321 1211111111345555665 676665442211
Q ss_pred eC--------CCcccccchHHHHHHHhhCCCceEEecCC
Q 045642 280 AN--------GGVIAPAGLHVLALAAKKHDVPFVVVAST 310 (406)
Q Consensus 280 ~n--------G~vvnk~GT~~lAl~Ak~~~vPv~V~aes 310 (406)
.+ ---+|-.|+..++-+|+..++.|+.++..
T Consensus 70 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~iv~~SS~ 108 (273)
T 2ggs_A 70 VDKCEIEKEKAYKINAEAVRHIVRAGKVIDSYIVHISTD 108 (273)
T ss_dssp HHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCEEEEEEEG
T ss_pred hhhhhhCHHHHHHHhHHHHHHHHHHHHHhCCeEEEEecc
Confidence 00 00135678999999998888877666544
No 493
>2a3n_A Putative glucosamine-fructose-6-phosphate aminotr; structural genomics, joint center for structural genomics; HET: MSE; 1.23A {Salmonella typhimurium}
Probab=28.52 E-value=3.8e+02 Score=25.28 Aligned_cols=35 Identities=17% Similarity=0.170 Sum_probs=29.1
Q ss_pred HHHHHHHHhCCCceEEEcchHHHHHhhcCCEEEEc
Q 045642 240 HILAKELDKKGLKAIVITDSAVFAMISRVNMVIVG 274 (406)
Q Consensus 240 ~~~a~~L~~~GI~vt~I~Dsav~~~m~~vd~VllG 274 (406)
...++...+.|+++..|++..-+.+.+.+|.+|.-
T Consensus 119 ~~a~~~ak~~Ga~vi~IT~~~~S~La~~ad~~l~~ 153 (355)
T 2a3n_A 119 VAIAEWCKAQGIRVVAITKNADSPLAQAATWHIPM 153 (355)
T ss_dssp HHHHHHHHHTTCEEEEEESCTTSHHHHTCSEEEEC
T ss_pred HHHHHHHHHCCCeEEEEECCCCChhhHhCCEEEEe
Confidence 56777888899999999998777888889988753
No 494
>2qbu_A Precorrin-2 methyltransferase; HET: SAH; 2.10A {Methanothermobacter thermautotrophicusorganism_taxid}
Probab=28.44 E-value=1e+02 Score=27.28 Aligned_cols=51 Identities=22% Similarity=0.339 Sum_probs=34.8
Q ss_pred HHHHHHHcCCceEEEEecCCCCcc--hHHHHHHHHhCCCceEEEcc-hHHHHHhh
Q 045642 215 FLCAAKEKKRSFEVFIADGAPKFE--GHILAKELDKKGLKAIVITD-SAVFAMIS 266 (406)
Q Consensus 215 ~L~~A~~~~~~f~ViV~EsrP~~e--G~~~a~~L~~~GI~vt~I~D-sav~~~m~ 266 (406)
.+....++|++ -|++..+.|..- |..+++.|.+.|+++.+||= +++.++..
T Consensus 86 ~i~~~~~~g~~-V~~l~~GDP~i~~~~~~l~~~~~~~gi~v~viPGiSs~~aa~a 139 (232)
T 2qbu_A 86 MVAAELEDGRD-VAFITLGDPSIYSTFSYLQQRIEDMGFKTEMVPGVTSFTACAA 139 (232)
T ss_dssp HHHHHHHTTCC-EEEEESBCTTBSCSHHHHHHHHHHTTCCEEEECCCCHHHHHHH
T ss_pred HHHHHHHCCCe-EEEEeCCCCccchhHHHHHHHHHHCCCcEEEeCCccHHHHHHH
Confidence 33333336665 466667999764 46888999999999999985 44444443
No 495
>3h4t_A Glycosyltransferase GTFA, glycosyltransferase; vancomycin, teicoplanin, ORF1, natural products, antibiotic; HET: UDP; 1.15A {Amycolatopsis orientalis} SCOP: c.87.1.5 PDB: 3h4i_A* 1pn3_A* 1pnv_A*
Probab=28.36 E-value=80 Score=30.33 Aligned_cols=99 Identities=14% Similarity=0.182 Sum_probs=49.6
Q ss_pred EEeccChHHHHHHHHHHHH-cCCceEEEEecCCCCcchHHHHHHHHhCCCceEEEcch---------------------H
Q 045642 203 ILTLGHSKFVKEFLCAAKE-KKRSFEVFIADGAPKFEGHILAKELDKKGLKAIVITDS---------------------A 260 (406)
Q Consensus 203 ILT~g~S~tV~~~L~~A~~-~~~~f~ViV~EsrP~~eG~~~a~~L~~~GI~vt~I~Ds---------------------a 260 (406)
|.|+|...-|..++.-|.. +.+..+|.++-+. . +...+...|+++.-+... .
T Consensus 5 i~~~gt~Ghv~p~~~La~~L~~~Gh~V~v~~~~-~-----~~~~v~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (404)
T 3h4t_A 5 ITGCGSRGDTEPLVALAARLRELGADARMCLPP-D-----YVERCAEVGVPMVPVGRAVRAGAREPGELPPGAAEVVTEV 78 (404)
T ss_dssp EEEESSHHHHHHHHHHHHHHHHTTCCEEEEECG-G-----GHHHHHHTTCCEEECSSCSSGGGSCTTCCCTTCGGGHHHH
T ss_pred EEeCCCCccHHHHHHHHHHHHHCCCeEEEEeCH-H-----HHHHHHHcCCceeecCCCHHHHhccccCCHHHHHHHHHHH
Confidence 5567777777776655443 1233455554322 1 334556678877766421 0
Q ss_pred HHHHhhcCCEEEEcceeEeeCCCcccccchHHHHHHHhhCCCceEEecCC
Q 045642 261 VFAMISRVNMVIVGVHAVMANGGVIAPAGLHVLALAAKKHDVPFVVVAST 310 (406)
Q Consensus 261 v~~~m~~vd~VllGAdav~~nG~vvnk~GT~~lAl~Ak~~~vPv~V~aes 310 (406)
+...+.....++-++|.|..+|... +....+++|+..++|++.+..+
T Consensus 79 ~~~~~~~l~~~~~~pD~Vi~~~~~~---~~~~a~~~A~~lgiP~v~~~~~ 125 (404)
T 3h4t_A 79 VAEWFDKVPAAIEGCDAVVTTGLLP---AAVAVRSMAEKLGIPYRYTVLS 125 (404)
T ss_dssp HHHHHHHHHHHHTTCSEEEEEECHH---HHHHHHHHHHHHTCCEEEEESS
T ss_pred HHHHHHHHHHHhcCCCEEEECCchh---hhhhhhhHHhhcCCCEEEEEcC
Confidence 1111111000001456665554321 1222367899999999976543
No 496
>3n8i_A Low molecular weight phosphotyrosine protein PHOS; tyrosine phosphatase, hydrolase, protein-ligand complex; HET: NLA; 1.50A {Homo sapiens} SCOP: c.44.1.1 PDB: 5pnt_A* 1xww_A 1bvh_A 1dg9_A* 1phr_A 1pnt_A 1z12_A 1z13_A 1c0e_A 2p4u_A
Probab=28.31 E-value=96 Score=26.23 Aligned_cols=72 Identities=7% Similarity=0.009 Sum_probs=49.2
Q ss_pred ccChHHHHHHHHHHHHc-CC--ceEEEEecCCCCcch----HHHHHHHHhCCCceEEEcchHHHHHhhcCCEEEEccee
Q 045642 206 LGHSKFVKEFLCAAKEK-KR--SFEVFIADGAPKFEG----HILAKELDKKGLKAIVITDSAVFAMISRVNMVIVGVHA 277 (406)
Q Consensus 206 ~g~S~tV~~~L~~A~~~-~~--~f~ViV~EsrP~~eG----~~~a~~L~~~GI~vt~I~Dsav~~~m~~vd~VllGAda 277 (406)
.++|...+.+|++.... |. .|.|.=+-+.|...| ....+.|.+.||+....+-.--...+...|.||.=.+.
T Consensus 16 ~cRSpmAE~~~~~~~~~~gl~~~~~v~SAGt~~~~~G~~~~~~a~~~l~~~Gid~~~~ar~l~~~~~~~~DlIi~M~~~ 94 (157)
T 3n8i_A 16 ICRSPIAEAVFRKLVTDQNISENWRVDSAATSGYEIGNPPDYRGQSCMKRHGIPMSHVARQITKEDFATFDYILCMDES 94 (157)
T ss_dssp SSHHHHHHHHHHHHHHHTTCGGGEEEEEEESSSTTTTCCCCHHHHHHHHHTTCCCCCCCCBCCHHHHHHCSEEEESSHH
T ss_pred hhHHHHHHHHHHHHHHHcCCCCcEEEEeeecCccccCCCCCHHHHHHHHHcCcCCCCceeECCHHHcCCCCEEEEeCcH
Confidence 46799999999987643 32 588888888887545 47788899999986322222122345678888765544
No 497
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=28.17 E-value=2.5e+02 Score=26.44 Aligned_cols=29 Identities=31% Similarity=0.408 Sum_probs=21.3
Q ss_pred ceeEeeCCCcccccchHHHHHHHhhCCCceEEe
Q 045642 275 VHAVMANGGVIAPAGLHVLALAAKKHDVPFVVV 307 (406)
Q Consensus 275 Adav~~nG~vvnk~GT~~lAl~Ak~~~vPv~V~ 307 (406)
.|.|+..|+.+ +.+..++|+..++|+++-
T Consensus 93 PDvVi~~g~~~----s~p~~laA~~~~iP~vih 121 (365)
T 3s2u_A 93 PVCVLGLGGYV----TGPGGLAARLNGVPLVIH 121 (365)
T ss_dssp CSEEEECSSST----HHHHHHHHHHTTCCEEEE
T ss_pred CCEEEEcCCcc----hHHHHHHHHHcCCCEEEE
Confidence 45556667654 456778999999999973
No 498
>1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A*
Probab=28.15 E-value=55 Score=30.37 Aligned_cols=109 Identities=15% Similarity=0.122 Sum_probs=59.7
Q ss_pred cEEEeccChHHHHHHHHH-HHHcCCceEEEEecCCCCcchHHHHHHHHhCCCceEEE--cc-hHHHHHhhcCCEEEEcce
Q 045642 201 EVILTLGHSKFVKEFLCA-AKEKKRSFEVFIADGAPKFEGHILAKELDKKGLKAIVI--TD-SAVFAMISRVNMVIVGVH 276 (406)
Q Consensus 201 ~~ILT~g~S~tV~~~L~~-A~~~~~~f~ViV~EsrP~~eG~~~a~~L~~~GI~vt~I--~D-sav~~~m~~vd~VllGAd 276 (406)
.+||+.|.++.+=..|.. +.+++...+|+++.-.+.......+..+...++.+... .| .++..++..+|.||--|-
T Consensus 5 ~~vlVTGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vih~A~ 84 (348)
T 1oc2_A 5 KNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEAILGDRVELVVGDIADAELVDKLAAKADAIVHYAA 84 (348)
T ss_dssp SEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGTGGGCSSSEEEEECCTTCHHHHHHHHTTCSEEEECCS
T ss_pred cEEEEeCCccHHHHHHHHHHHHhCCCCEEEEEeCCCCCCChhHHhhhccCCeEEEECCCCCHHHHHHHhhcCCEEEECCc
Confidence 468888887777665544 34343357888876544211111112222223332221 22 355667788887776553
Q ss_pred eEee-----CC---CcccccchHHHHHHHhhCCCceEEecC
Q 045642 277 AVMA-----NG---GVIAPAGLHVLALAAKKHDVPFVVVAS 309 (406)
Q Consensus 277 av~~-----nG---~vvnk~GT~~lAl~Ak~~~vPv~V~ae 309 (406)
.... +- --+|-.||..++-+|+.+++.|+.++.
T Consensus 85 ~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~v~~SS 125 (348)
T 1oc2_A 85 ESHNDNSLNDPSPFIHTNFIGTYTLLEAARKYDIRFHHVST 125 (348)
T ss_dssp CCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHHTCEEEEEEE
T ss_pred ccCccchhhCHHHHHHHHHHHHHHHHHHHHHhCCeEEEecc
Confidence 2210 00 014678999999999988886665543
No 499
>2ywd_A Glutamine amidotransferase subunit PDXT; pyridoxine biosynthesis, structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=28.06 E-value=1.1e+02 Score=25.86 Aligned_cols=62 Identities=15% Similarity=0.213 Sum_probs=39.2
Q ss_pred HHHHHHHHhCCCceEEEcchHHHHHhhcCCEEEEcceeEeeCCCc---cc----ccchHHHHHHHhhCC-CceEEecCCc
Q 045642 240 HILAKELDKKGLKAIVITDSAVFAMISRVNMVIVGVHAVMANGGV---IA----PAGLHVLALAAKKHD-VPFVVVASTH 311 (406)
Q Consensus 240 ~~~a~~L~~~GI~vt~I~Dsav~~~m~~vd~VllGAdav~~nG~v---vn----k~GT~~lAl~Ak~~~-vPv~V~aes~ 311 (406)
....+.|.+.|++++++.+.. -+.++|.++++ ||- .. ..+...+...+...+ +|++-+|--+
T Consensus 15 ~~~~~~l~~~G~~~~~~~~~~---~l~~~dglil~-------GG~~~~~~~~~~~~~~~~~i~~~~~~~~~PilGiC~G~ 84 (191)
T 2ywd_A 15 REHKEALKRLGIEAKEVRKKE---HLEGLKALIVP-------GGESTTIGKLAREYGIEDEVRKRVEEGSLALFGTCAGA 84 (191)
T ss_dssp HHHHHHHHTTTCCCEEECSGG---GGTTCSEEEEC-------SSCHHHHHHHHHHTTHHHHHHHHHHTTCCEEEEETHHH
T ss_pred HHHHHHHHHCCCEEEEeCChh---hhccCCEEEEC-------CCChhhhHHhhhhhhHHHHHHHHHHCCCCeEEEECHHH
Confidence 467889999999999998754 35667777774 221 11 122222333334568 9999988543
No 500
>1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A*
Probab=28.04 E-value=2e+02 Score=26.29 Aligned_cols=106 Identities=15% Similarity=0.157 Sum_probs=52.2
Q ss_pred EEEeccChHHHHHHHHHH-HHcCCceEEEEecCCCCcchHHHHHHHHh-CCCceEE-Ecc----hHHHHHhhc--CCEEE
Q 045642 202 VILTLGHSKFVKEFLCAA-KEKKRSFEVFIADGAPKFEGHILAKELDK-KGLKAIV-ITD----SAVFAMISR--VNMVI 272 (406)
Q Consensus 202 ~ILT~g~S~tV~~~L~~A-~~~~~~f~ViV~EsrP~~eG~~~a~~L~~-~GI~vt~-I~D----sav~~~m~~--vd~Vl 272 (406)
+||+.|.++.+=..|... .++| .+|+++...+.... ..+..|.+ .|-.+.+ ..| .++..++.. +|.||
T Consensus 2 ~vlVTGatG~iG~~l~~~L~~~G--~~V~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~D~vi 78 (338)
T 1udb_A 2 RVLVTGGSGYIGSHTCVQLLQNG--HDVIILDNLCNSKR-SVLPVIERLGGKHPTFVEGDIRNEALMTEILHDHAIDTVI 78 (338)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTT--CEEEEEECCSSCCT-THHHHHHHHHTSCCEEEECCTTCHHHHHHHHHHTTCSEEE
T ss_pred EEEEECCCCHHHHHHHHHHHHCC--CEEEEEecCCCcch-hHHHHHHhhcCCcceEEEccCCCHHHHHHHhhccCCCEEE
Confidence 577778777766655443 3334 57777653221111 11222322 1322332 233 345555653 66666
Q ss_pred EcceeEee-----C---CCcccccchHHHHHHHhhCCCceEEecCC
Q 045642 273 VGVHAVMA-----N---GGVIAPAGLHVLALAAKKHDVPFVVVAST 310 (406)
Q Consensus 273 lGAdav~~-----n---G~vvnk~GT~~lAl~Ak~~~vPv~V~aes 310 (406)
--|-.... + ---+|-.||..++-+|+..++.-+|...+
T Consensus 79 h~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS 124 (338)
T 1udb_A 79 HFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNFIFSSS 124 (338)
T ss_dssp ECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEE
T ss_pred ECCccCccccchhcHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEcc
Confidence 54321100 0 00135678888888888878755554443
Done!